#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Transposase_mut	PF00872.18	gi|297620248|ref|YP_003708385.1|	-	1.3e-71	241.5	0.0	1.6e-71	241.2	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297620248|ref|YP_003708385.1|	-	1.4e-05	25.4	0.0	5e-05	23.6	0.0	2.0	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.6	gi|297620248|ref|YP_003708385.1|	-	0.023	14.9	0.4	0.27	11.5	0.0	2.8	2	1	0	2	2	2	0	DDE	domain
ParD	PF09386.10	gi|297620249|ref|YP_003708386.1|	-	0.00077	19.8	0.0	0.00087	19.6	0.0	1.1	1	0	0	1	1	1	1	Antitoxin	ParD
HicB	PF05534.12	gi|297620249|ref|YP_003708386.1|	-	0.0038	17.0	0.0	0.0061	16.4	0.0	1.4	1	0	0	1	1	1	1	HicB	family
CofC	PF01983.16	gi|297620249|ref|YP_003708386.1|	-	0.026	13.7	0.5	0.027	13.7	0.5	1.1	1	0	0	1	1	1	0	Guanylyl	transferase	CofC	like
Fic	PF02661.18	gi|297620250|ref|YP_003708387.1|	-	5.9e-07	30.3	0.0	7.7e-07	29.9	0.0	1.1	1	0	0	1	1	1	1	Fic/DOC	family
CobT_C	PF11775.8	gi|297620251|ref|YP_003708388.1|	-	0.062	12.9	0.0	0.085	12.5	0.0	1.2	1	0	0	1	1	1	0	Cobalamin	biosynthesis	protein	CobT	VWA	domain
DUF1282	PF06930.12	gi|297620252|ref|YP_003708389.1|	-	0.0042	16.9	0.4	0.0044	16.8	0.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1282)
DHHC	PF01529.20	gi|297620252|ref|YP_003708389.1|	-	0.05	13.7	4.4	0.055	13.6	4.4	1.0	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
DUF3989	PF13150.6	gi|297620252|ref|YP_003708389.1|	-	0.36	10.6	3.2	0.18	11.5	0.8	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3989)
HTHP	PF11534.8	gi|297620254|ref|YP_003708391.1|	-	0.12	12.9	0.2	0.33	11.4	0.1	1.8	2	0	0	2	2	2	0	Hexameric	tyrosine-coordinated	heme	protein	(HTHP)
DDE_Tnp_1_assoc	PF13808.6	gi|297620255|ref|YP_003708392.1|	-	5.4e-27	93.7	0.3	1.6e-26	92.1	0.1	1.9	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.21	gi|297620255|ref|YP_003708392.1|	-	9e-14	51.6	0.2	1.2e-13	51.2	0.2	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
Transposase_mut	PF00872.18	gi|297620256|ref|YP_003708393.1|	-	2.7e-16	59.4	0.1	3.5e-16	59.0	0.1	1.1	1	0	0	1	1	1	1	Transposase,	Mutator	family
DDE_Tnp_IS240	PF13610.6	gi|297620256|ref|YP_003708393.1|	-	0.047	13.9	0.0	0.071	13.3	0.0	1.5	1	1	0	1	1	1	0	DDE	domain
DHC	PF09626.10	gi|297620257|ref|YP_003708394.1|	-	0.025	15.4	0.1	0.028	15.3	0.1	1.1	1	0	0	1	1	1	0	Dihaem	cytochrome	c
SAP	PF02037.27	gi|297620257|ref|YP_003708394.1|	-	0.094	12.5	0.3	0.15	11.8	0.3	1.3	1	0	0	1	1	1	0	SAP	domain
polyprenyl_synt	PF00348.17	gi|297620258|ref|YP_003708395.1|	-	1.4e-33	116.0	0.0	2.8e-33	115.1	0.0	1.4	1	1	0	1	1	1	1	Polyprenyl	synthetase
Hexapep	PF00132.24	gi|297620259|ref|YP_003708396.1|	-	9e-13	47.4	13.0	6.7e-10	38.3	0.7	4.2	2	1	2	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Fucokinase	PF07959.12	gi|297620259|ref|YP_003708396.1|	-	0.099	11.6	0.0	8.2	5.3	0.0	2.1	1	1	1	2	2	2	0	L-fucokinase
Hexapep_2	PF14602.6	gi|297620259|ref|YP_003708396.1|	-	0.3	10.9	0.2	0.3	10.9	0.2	3.8	3	1	2	5	5	5	0	Hexapeptide	repeat	of	succinyl-transferase
Glyco_trans_2_3	PF13632.6	gi|297620261|ref|YP_003708398.1|	-	1.9e-17	63.8	0.2	1.9e-17	63.8	0.2	2.9	3	1	0	3	3	3	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.26	gi|297620261|ref|YP_003708398.1|	-	2.4e-09	37.2	0.0	3.9e-09	36.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|297620261|ref|YP_003708398.1|	-	2.7e-09	36.8	0.0	5.3e-09	35.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_3	PF13641.6	gi|297620261|ref|YP_003708398.1|	-	0.00028	20.8	0.0	0.0021	18.0	0.0	2.0	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
MdoG	PF04349.12	gi|297620262|ref|YP_003708399.1|	-	5.7e-185	615.8	0.0	6.5e-185	615.6	0.0	1.0	1	0	0	1	1	1	1	Periplasmic	glucan	biosynthesis	protein,	MdoG
Dala_Dala_lig_C	PF07478.13	gi|297620263|ref|YP_003708400.1|	-	4.3e-25	88.5	0.0	7.1e-25	87.8	0.0	1.3	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
Methyltransf_25	PF13649.6	gi|297620263|ref|YP_003708400.1|	-	2.7e-20	72.9	0.0	6e-20	71.8	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297620263|ref|YP_003708400.1|	-	6.1e-17	62.1	0.0	1.3e-16	61.0	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|297620263|ref|YP_003708400.1|	-	1.2e-16	60.9	0.0	5.9e-16	58.6	0.0	2.0	1	1	1	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|297620263|ref|YP_003708400.1|	-	1.3e-09	37.7	0.1	6.3e-09	35.5	0.0	1.9	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|297620263|ref|YP_003708400.1|	-	5.5e-09	36.1	0.1	1.8e-08	34.4	0.1	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|297620263|ref|YP_003708400.1|	-	5.1e-05	22.9	0.0	0.0001	21.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
ATPgrasp_Ter	PF15632.6	gi|297620263|ref|YP_003708400.1|	-	0.00063	19.5	0.0	0.0066	16.2	0.0	2.3	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
TehB	PF03848.14	gi|297620263|ref|YP_003708400.1|	-	0.0021	17.5	0.0	0.0035	16.8	0.0	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
ATP-grasp_3	PF02655.14	gi|297620263|ref|YP_003708400.1|	-	0.0026	17.8	0.0	0.0042	17.2	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
Methyltransf_32	PF13679.6	gi|297620263|ref|YP_003708400.1|	-	0.018	15.1	0.0	0.032	14.2	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
CMAS	PF02353.20	gi|297620263|ref|YP_003708400.1|	-	0.02	14.2	0.0	0.036	13.4	0.0	1.3	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
RrnaAD	PF00398.20	gi|297620263|ref|YP_003708400.1|	-	0.027	13.5	0.0	2	7.4	0.0	2.2	2	0	0	2	2	2	0	Ribosomal	RNA	adenine	dimethylase
Cons_hypoth95	PF03602.15	gi|297620263|ref|YP_003708400.1|	-	0.028	14.1	0.0	0.056	13.1	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
GSP_synth	PF03738.14	gi|297620263|ref|YP_003708400.1|	-	0.028	13.6	0.0	0.058	12.5	0.0	1.4	1	0	0	1	1	1	0	Glutathionylspermidine	synthase	preATP-grasp
ATP-grasp_4	PF13535.6	gi|297620263|ref|YP_003708400.1|	-	0.042	13.4	0.0	0.13	11.9	0.0	1.8	2	0	0	2	2	2	0	ATP-grasp	domain
UPF0020	PF01170.18	gi|297620263|ref|YP_003708400.1|	-	0.1	12.3	0.0	0.87	9.2	0.0	2.6	3	1	0	3	3	3	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_4	PF02390.17	gi|297620263|ref|YP_003708400.1|	-	0.12	11.9	0.0	1.4	8.4	0.0	2.3	2	0	0	2	2	2	0	Putative	methyltransferase
Methyltransf_8	PF05148.15	gi|297620263|ref|YP_003708400.1|	-	0.13	12.1	0.0	0.42	10.4	0.0	1.8	2	0	0	2	2	2	0	Hypothetical	methyltransferase
HTH_21	PF13276.6	gi|297620264|ref|YP_003708401.1|	-	0.086	13.0	0.1	0.094	12.9	0.1	1.2	1	1	0	1	1	1	0	HTH-like	domain
DUF952	PF06108.12	gi|297620265|ref|YP_003708402.1|	-	2.7e-15	56.1	0.0	3.1e-15	56.0	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF952)
TatC	PF00902.18	gi|297620266|ref|YP_003708403.1|	-	3e-52	177.5	10.7	3.6e-52	177.2	10.7	1.1	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
Claudin_3	PF06653.11	gi|297620266|ref|YP_003708403.1|	-	1.4	8.8	11.1	0.74	9.7	0.8	2.7	2	1	1	3	3	3	0	Tight	junction	protein,	Claudin-like
MttA_Hcf106	PF02416.16	gi|297620267|ref|YP_003708404.1|	-	1.9e-18	65.6	0.1	1.9e-18	65.5	0.1	1.0	1	0	0	1	1	1	1	mttA/Hcf106	family
Lyase_1	PF00206.20	gi|297620268|ref|YP_003708405.1|	-	2.5e-22	79.7	0.0	4.1e-22	79.0	0.0	1.3	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.9	gi|297620268|ref|YP_003708405.1|	-	4.4e-16	59.2	0.0	1.5e-15	57.5	0.0	2.0	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminus
UPF0137	PF03677.13	gi|297620269|ref|YP_003708406.1|	-	7.4e-112	372.9	4.6	8.3e-112	372.7	4.6	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0137)
AAA_31	PF13614.6	gi|297620270|ref|YP_003708407.1|	-	2.6e-37	128.4	0.0	4.1e-37	127.8	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|297620270|ref|YP_003708407.1|	-	1.5e-19	70.3	0.0	2e-19	69.9	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
CBP_BcsQ	PF06564.12	gi|297620270|ref|YP_003708407.1|	-	1.7e-12	47.3	0.0	1e-11	44.8	0.0	1.8	1	1	0	1	1	1	1	Cellulose	biosynthesis	protein	BcsQ
ParA	PF10609.9	gi|297620270|ref|YP_003708407.1|	-	2.8e-08	33.5	0.0	5.7e-08	32.5	0.0	1.5	1	1	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
Fer4_NifH	PF00142.18	gi|297620270|ref|YP_003708407.1|	-	7.3e-07	28.9	0.0	0.00044	19.8	0.0	2.3	2	1	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.15	gi|297620270|ref|YP_003708407.1|	-	0.00023	20.5	0.4	0.99	8.5	0.0	3.0	3	1	0	3	3	3	2	Anion-transporting	ATPase
MipZ	PF09140.11	gi|297620270|ref|YP_003708407.1|	-	0.0024	17.2	0.1	0.17	11.2	0.1	2.1	2	0	0	2	2	2	1	ATPase	MipZ
VirC1	PF07015.11	gi|297620270|ref|YP_003708407.1|	-	0.069	12.4	0.5	0.66	9.2	0.1	2.1	1	1	1	2	2	2	0	VirC1	protein
tRNA-synt_2b	PF00587.25	gi|297620271|ref|YP_003708408.1|	-	7e-40	136.9	0.1	2.7e-39	135.0	0.0	1.9	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|297620271|ref|YP_003708408.1|	-	3e-20	72.1	0.6	7.6e-20	70.9	0.6	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA_SAD	PF07973.14	gi|297620271|ref|YP_003708408.1|	-	2.5e-15	56.3	0.0	5.7e-15	55.1	0.0	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
TGS	PF02824.21	gi|297620271|ref|YP_003708408.1|	-	3.2e-08	33.5	0.0	1.1e-07	31.8	0.0	1.9	2	0	0	2	2	2	1	TGS	domain
ThiS	PF02597.20	gi|297620271|ref|YP_003708408.1|	-	5.9e-06	26.8	0.0	1.6e-05	25.4	0.0	1.7	1	0	0	1	1	1	1	ThiS	family
Peptidase_M41	PF01434.18	gi|297620271|ref|YP_003708408.1|	-	0.052	13.4	0.1	0.13	12.0	0.1	1.6	1	0	0	1	1	1	0	Peptidase	family	M41
Thioredoxin_5	PF13743.6	gi|297620273|ref|YP_003708410.1|	-	0.088	12.5	0.0	0.15	11.8	0.0	1.3	1	0	0	1	1	1	0	Thioredoxin
FKBP_C	PF00254.28	gi|297620274|ref|YP_003708411.1|	-	8.4e-07	29.2	0.0	2.3e-06	27.8	0.0	1.7	1	1	1	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
FKBP_N	PF01346.18	gi|297620274|ref|YP_003708411.1|	-	0.012	16.5	0.1	0.043	14.8	0.1	1.8	2	0	0	2	2	2	0	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
MannoseP_isomer	PF01050.18	gi|297620276|ref|YP_003708413.1|	-	2.8e-64	215.6	1.6	4.2e-64	215.0	1.6	1.3	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
NTP_transferase	PF00483.23	gi|297620276|ref|YP_003708413.1|	-	8.1e-62	209.0	0.0	2.4e-61	207.5	0.0	1.7	2	0	0	2	2	2	1	Nucleotidyl	transferase
Cupin_2	PF07883.11	gi|297620276|ref|YP_003708413.1|	-	1.6e-07	31.0	1.1	2.2e-07	30.5	0.3	1.7	2	0	0	2	2	2	1	Cupin	domain
NTP_transf_3	PF12804.7	gi|297620276|ref|YP_003708413.1|	-	7e-06	26.5	0.0	1.4e-05	25.5	0.0	1.5	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
MFS_1	PF07690.16	gi|297620277|ref|YP_003708414.1|	-	1.4e-20	73.6	38.9	1.4e-20	73.6	38.9	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|297620277|ref|YP_003708414.1|	-	4.6e-09	35.2	15.1	6.7e-09	34.7	15.1	1.1	1	0	0	1	1	1	1	Transmembrane	secretion	effector
Acyltransferase	PF01553.21	gi|297620277|ref|YP_003708414.1|	-	3.9e-06	26.5	0.0	8.1e-06	25.5	0.0	1.6	1	0	0	1	1	1	1	Acyltransferase
DpnD-PcfM	PF14207.6	gi|297620277|ref|YP_003708414.1|	-	0.1	12.5	0.6	6.5	6.7	0.1	2.3	2	0	0	2	2	2	0	DpnD/PcfM-like	protein
Exonuc_V_gamma	PF04257.14	gi|297620278|ref|YP_003708415.1|	-	7.6e-156	520.5	15.1	3.4e-155	518.3	15.1	1.8	1	1	0	1	1	1	1	Exodeoxyribonuclease	V,	gamma	subunit
RecC_C	PF17946.1	gi|297620278|ref|YP_003708415.1|	-	1.2e-18	67.6	0.2	3.9e-17	62.7	0.0	2.6	2	0	0	2	2	2	1	RecC	C-terminal	domain
UvrD-helicase	PF00580.21	gi|297620279|ref|YP_003708416.1|	-	5.4e-53	180.6	0.0	1.4e-52	179.2	0.0	1.6	1	0	0	1	1	1	1	UvrD/REP	helicase	N-terminal	domain
UvrD_C	PF13361.6	gi|297620279|ref|YP_003708416.1|	-	6.5e-24	84.9	0.0	3.5e-22	79.3	0.0	2.6	1	1	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
AAA_19	PF13245.6	gi|297620279|ref|YP_003708416.1|	-	6.8e-21	75.1	0.0	1.4e-19	70.9	0.0	2.8	3	1	0	3	3	3	1	AAA	domain
UvrD_C_2	PF13538.6	gi|297620279|ref|YP_003708416.1|	-	1.4e-07	31.2	0.1	0.0089	15.8	0.0	2.5	2	0	0	2	2	2	2	UvrD-like	helicase	C-terminal	domain
AAA_30	PF13604.6	gi|297620279|ref|YP_003708416.1|	-	0.0002	21.1	0.0	0.11	12.2	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|297620279|ref|YP_003708416.1|	-	0.00045	20.5	0.0	0.1	12.9	0.0	3.0	2	0	0	2	2	2	1	AAA	domain
PDDEXK_1	PF12705.7	gi|297620279|ref|YP_003708416.1|	-	0.011	15.6	0.2	0.049	13.5	0.0	2.2	2	0	0	2	2	2	0	PD-(D/E)XK	nuclease	superfamily
AAA_30	PF13604.6	gi|297620280|ref|YP_003708417.1|	-	1.3e-33	116.4	0.0	1.9e-33	115.8	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.6	gi|297620280|ref|YP_003708417.1|	-	1.6e-26	93.4	0.0	8e-26	91.1	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
UvrD_C_2	PF13538.6	gi|297620280|ref|YP_003708417.1|	-	7.2e-15	54.6	0.0	1.3e-14	53.8	0.0	1.4	1	0	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
AAA_11	PF13086.6	gi|297620280|ref|YP_003708417.1|	-	4.3e-12	46.4	0.2	1.2e-05	25.2	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
Viral_helicase1	PF01443.18	gi|297620280|ref|YP_003708417.1|	-	8.6e-10	38.7	0.1	5.2e-05	23.1	0.0	3.2	3	0	0	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
Helicase_RecD	PF05127.14	gi|297620280|ref|YP_003708417.1|	-	1e-07	32.0	0.0	3.2e-07	30.4	0.0	1.8	1	1	0	1	1	1	1	Helicase
PhoH	PF02562.16	gi|297620280|ref|YP_003708417.1|	-	8.5e-06	25.4	0.0	0.064	12.7	0.0	2.3	2	0	0	2	2	2	2	PhoH-like	protein
UvrD_C	PF13361.6	gi|297620280|ref|YP_003708417.1|	-	0.0012	18.3	0.2	0.0032	16.9	0.2	1.7	1	1	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
SH3_13	PF18335.1	gi|297620280|ref|YP_003708417.1|	-	0.0068	16.2	0.0	0.014	15.2	0.0	1.4	1	0	0	1	1	1	1	ATP-dependent	RecD-like	DNA	helicase	SH3	domain
UvrD-helicase	PF00580.21	gi|297620280|ref|YP_003708417.1|	-	0.0083	15.7	0.0	0.027	14.0	0.0	1.7	2	0	0	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
DUF2075	PF09848.9	gi|297620280|ref|YP_003708417.1|	-	0.018	14.3	0.0	0.15	11.3	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
Flavi_DEAD	PF07652.14	gi|297620280|ref|YP_003708417.1|	-	0.034	14.1	0.1	0.8	9.7	0.0	2.8	2	1	0	2	2	2	0	Flavivirus	DEAD	domain
AAA_22	PF13401.6	gi|297620280|ref|YP_003708417.1|	-	0.041	14.2	0.1	0.11	12.7	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
ResIII	PF04851.15	gi|297620280|ref|YP_003708417.1|	-	0.13	12.2	0.0	0.46	10.5	0.0	1.9	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
T2SSE	PF00437.20	gi|297620280|ref|YP_003708417.1|	-	0.15	11.1	0.0	0.25	10.3	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA	PF00004.29	gi|297620280|ref|YP_003708417.1|	-	0.21	12.0	0.2	0.41	11.1	0.2	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.17	gi|297620280|ref|YP_003708417.1|	-	0.35	10.6	1.9	0.41	10.3	0.2	2.0	2	1	1	3	3	3	0	IstB-like	ATP	binding	protein
ATPgrasp_YheCD	PF14398.6	gi|297620281|ref|YP_003708418.1|	-	0.17	11.1	0.5	0.48	9.6	0.1	1.8	2	0	0	2	2	2	0	YheC/D	like	ATP-grasp
GSH-S_ATP	PF02955.16	gi|297620281|ref|YP_003708418.1|	-	0.2	11.1	0.0	0.4	10.1	0.0	1.4	1	0	0	1	1	1	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
Ins134_P3_kin_N	PF17927.1	gi|297620282|ref|YP_003708419.1|	-	0.012	16.0	0.0	0.21	12.0	0.0	2.6	2	1	0	2	2	2	0	Inositol	1,3,4-trisphosphate	5/6-kinase	pre-ATP-grasp	domain
ATPgrasp_YheCD	PF14398.6	gi|297620282|ref|YP_003708419.1|	-	0.019	14.2	0.4	0.078	12.2	0.1	1.9	2	0	0	2	2	2	0	YheC/D	like	ATP-grasp
YjbH	PF06082.11	gi|297620283|ref|YP_003708420.1|	-	1.1e-162	543.3	0.0	1.1e-123	414.4	0.0	2.0	1	1	1	2	2	2	2	Exopolysaccharide	biosynthesis	protein	YbjH
ALAD	PF00490.21	gi|297620284|ref|YP_003708421.1|	-	1.3e-137	458.2	0.3	1.5e-137	458.0	0.3	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
AhpC-TSA	PF00578.21	gi|297620285|ref|YP_003708422.1|	-	1.2e-31	109.2	0.1	6.3e-31	106.9	0.0	1.8	2	0	0	2	2	2	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|297620285|ref|YP_003708422.1|	-	1.2e-15	57.5	0.0	1.8e-15	57.0	0.0	1.2	1	0	0	1	1	1	1	Redoxin
SCO1-SenC	PF02630.14	gi|297620285|ref|YP_003708422.1|	-	0.0022	17.9	0.0	0.0036	17.2	0.0	1.3	1	0	0	1	1	1	1	SCO1/SenC
GIDA	PF01134.22	gi|297620285|ref|YP_003708422.1|	-	0.082	12.0	0.0	0.13	11.4	0.0	1.2	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
AhpC-TSA_2	PF13911.6	gi|297620285|ref|YP_003708422.1|	-	0.084	13.0	0.0	0.39	10.9	0.0	1.7	1	1	0	2	2	2	0	AhpC/TSA	antioxidant	enzyme
Glycos_transf_2	PF00535.26	gi|297620288|ref|YP_003708425.1|	-	1.5e-17	64.0	0.0	2.8e-17	63.0	0.0	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_4	PF13704.6	gi|297620288|ref|YP_003708425.1|	-	1.2e-05	25.7	0.0	3.2e-05	24.4	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|297620288|ref|YP_003708425.1|	-	0.00011	22.1	0.0	0.00014	21.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.6	gi|297620288|ref|YP_003708425.1|	-	0.005	16.3	0.0	0.027	14.0	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.9	gi|297620288|ref|YP_003708425.1|	-	0.051	13.0	0.3	0.098	12.1	0.0	1.5	2	0	0	2	2	2	0	Glycosyltransferase	like	family	2
HhH-GPD	PF00730.25	gi|297620289|ref|YP_003708426.1|	-	4.6e-19	68.9	0.0	8.2e-19	68.1	0.0	1.4	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
NUDIX_4	PF14815.6	gi|297620289|ref|YP_003708426.1|	-	8.4e-15	54.7	0.0	1.6e-14	53.8	0.0	1.5	1	0	0	1	1	1	1	NUDIX	domain
HHH	PF00633.23	gi|297620289|ref|YP_003708426.1|	-	0.0025	17.6	0.0	0.005	16.6	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Glyco_trans_1_2	PF13524.6	gi|297620290|ref|YP_003708427.1|	-	1.2e-16	60.9	0.1	2.8e-16	59.7	0.1	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF3880	PF12996.7	gi|297620290|ref|YP_003708427.1|	-	0.012	15.7	0.0	0.025	14.7	0.0	1.6	1	0	0	1	1	1	0	DUF	based	on	E.	rectale	Gene	description	(DUF3880)
SRP_SPB	PF02978.19	gi|297620291|ref|YP_003708428.1|	-	0.013	16.1	0.4	0.013	16.1	0.4	1.8	2	1	0	2	2	2	0	Signal	peptide	binding	domain
Spc24	PF08286.11	gi|297620291|ref|YP_003708428.1|	-	0.065	13.5	2.5	0.11	12.7	2.5	1.5	1	0	0	1	1	1	0	Spc24	subunit	of	Ndc80
GH-E	PF14410.6	gi|297620291|ref|YP_003708428.1|	-	0.082	13.3	5.3	0.21	12.0	0.0	3.3	3	1	0	3	3	3	0	HNH/ENDO	VII	superfamily	nuclease	with	conserved	GHE	residues
DDE_Tnp_IS66_C	PF13817.6	gi|297620293|ref|YP_003708430.1|	-	1.6e-13	50.6	0.0	2.2e-13	50.2	0.0	1.1	1	0	0	1	1	1	1	IS66	C-terminal	element
Transposase_mut	PF00872.18	gi|297620294|ref|YP_003708431.1|	-	2e-37	128.9	0.0	2.5e-37	128.6	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
Transposase_mut	PF00872.18	gi|297620295|ref|YP_003708432.1|	-	4.6e-25	88.3	0.5	6e-25	87.9	0.5	1.1	1	0	0	1	1	1	1	Transposase,	Mutator	family
DDE_Tnp_IS240	PF13610.6	gi|297620295|ref|YP_003708432.1|	-	0.021	15.0	0.1	0.054	13.7	0.0	1.8	1	1	1	2	2	2	0	DDE	domain
TnpB_IS66	PF05717.13	gi|297620296|ref|YP_003708433.1|	-	4.1e-22	78.0	0.1	4.5e-22	77.9	0.1	1.0	1	0	0	1	1	1	1	IS66	Orf2	like	protein
Abhydrolase_6	PF12697.7	gi|297620297|ref|YP_003708434.1|	-	4.6e-08	33.9	0.0	3.6e-05	24.5	0.0	2.1	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.8	gi|297620297|ref|YP_003708434.1|	-	3.1e-05	23.3	0.0	0.00095	18.5	0.0	2.7	1	1	1	2	2	2	1	Serine	aminopeptidase,	S33
Abhydrolase_1	PF00561.20	gi|297620297|ref|YP_003708434.1|	-	0.00012	21.8	0.0	0.014	15.0	0.1	2.4	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Thioesterase	PF00975.20	gi|297620297|ref|YP_003708434.1|	-	0.00023	21.4	0.0	0.00032	20.9	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	domain
FSH1	PF03959.13	gi|297620297|ref|YP_003708434.1|	-	0.0011	18.6	0.0	0.0024	17.6	0.0	1.5	1	1	0	2	2	2	1	Serine	hydrolase	(FSH1)
LIDHydrolase	PF10230.9	gi|297620297|ref|YP_003708434.1|	-	0.014	15.0	0.0	0.24	10.9	0.0	2.1	2	0	0	2	2	2	0	Lipid-droplet	associated	hydrolase
DUF915	PF06028.11	gi|297620297|ref|YP_003708434.1|	-	0.041	13.2	0.0	0.12	11.7	0.0	1.6	2	0	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
PGAP1	PF07819.13	gi|297620297|ref|YP_003708434.1|	-	0.14	11.9	0.0	0.32	10.7	0.0	1.6	1	1	1	2	2	2	0	PGAP1-like	protein
MFS_1	PF07690.16	gi|297620298|ref|YP_003708435.1|	-	2e-24	86.2	48.1	3.4e-14	52.5	22.3	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_4	PF06779.14	gi|297620298|ref|YP_003708435.1|	-	9.6e-11	41.6	27.5	6.1e-09	35.6	23.4	3.3	1	1	1	2	2	2	2	Uncharacterised	MFS-type	transporter	YbfB
MFS_3	PF05977.13	gi|297620298|ref|YP_003708435.1|	-	5.7e-07	28.3	3.5	5.7e-07	28.3	3.5	2.1	2	0	0	2	2	2	1	Transmembrane	secretion	effector
MFS_1_like	PF12832.7	gi|297620298|ref|YP_003708435.1|	-	9.8e-05	21.4	31.4	0.0045	15.9	13.0	2.1	1	1	1	2	2	2	2	MFS_1	like	family
Sugar_tr	PF00083.24	gi|297620298|ref|YP_003708435.1|	-	0.00073	18.5	28.7	0.0013	17.7	12.4	2.9	1	1	1	3	3	3	2	Sugar	(and	other)	transporter
Abhydrolase_2	PF02230.16	gi|297620299|ref|YP_003708436.1|	-	1.3e-16	61.1	0.0	1.1e-15	58.0	0.0	1.9	1	1	0	1	1	1	1	Phospholipase/Carboxylesterase
Hydrolase_4	PF12146.8	gi|297620299|ref|YP_003708436.1|	-	2e-05	24.0	0.0	0.00023	20.5	0.0	2.0	2	0	0	2	2	2	1	Serine	aminopeptidase,	S33
Abhydrolase_6	PF12697.7	gi|297620299|ref|YP_003708436.1|	-	0.0024	18.5	0.1	0.0031	18.2	0.1	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.20	gi|297620299|ref|YP_003708436.1|	-	0.0052	16.5	0.5	0.019	14.6	0.5	1.8	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Esterase_phd	PF10503.9	gi|297620299|ref|YP_003708436.1|	-	0.065	12.7	0.0	0.098	12.1	0.0	1.3	1	0	0	1	1	1	0	Esterase	PHB	depolymerase
Peptidase_S9	PF00326.21	gi|297620299|ref|YP_003708436.1|	-	0.24	10.8	0.9	2.7	7.4	0.0	2.2	1	1	1	2	2	2	0	Prolyl	oligopeptidase	family
HAD	PF12710.7	gi|297620301|ref|YP_003708438.1|	-	1.1e-13	52.0	0.0	1.5e-13	51.6	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|297620301|ref|YP_003708438.1|	-	3.8e-07	30.6	0.0	1.3e-05	25.7	0.0	2.2	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.12	gi|297620301|ref|YP_003708438.1|	-	0.0021	17.5	0.0	0.0034	16.8	0.0	1.4	1	0	0	1	1	1	1	Putative	Phosphatase
HAD_2	PF13419.6	gi|297620301|ref|YP_003708438.1|	-	0.0056	16.8	0.0	0.045	13.8	0.0	2.2	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Ribosomal_S27e	PF01667.17	gi|297620301|ref|YP_003708438.1|	-	0.025	14.3	0.0	0.046	13.4	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S27
2-Hacid_dh_C	PF02826.19	gi|297620302|ref|YP_003708439.1|	-	5.7e-52	175.6	0.1	1.1e-51	174.7	0.0	1.5	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|297620302|ref|YP_003708439.1|	-	3.6e-26	91.4	0.0	4.8e-26	91.0	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.15	gi|297620302|ref|YP_003708439.1|	-	8.6e-06	26.0	0.1	1.6e-05	25.1	0.1	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.12	gi|297620302|ref|YP_003708439.1|	-	0.011	15.3	0.0	0.024	14.2	0.0	1.5	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
3HCDH_N	PF02737.18	gi|297620302|ref|YP_003708439.1|	-	0.1	12.5	0.5	0.7	9.8	0.5	2.1	1	1	1	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AdoHcyase_NAD	PF00670.21	gi|297620302|ref|YP_003708439.1|	-	0.11	12.6	0.0	0.22	11.6	0.0	1.4	1	0	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
ACT	PF01842.25	gi|297620302|ref|YP_003708439.1|	-	0.11	12.3	0.5	0.27	11.0	0.1	1.9	2	0	0	2	2	2	0	ACT	domain
AlaDh_PNT_C	PF01262.21	gi|297620302|ref|YP_003708439.1|	-	0.11	11.8	0.8	2.3	7.5	0.8	2.3	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
XdhC_C	PF13478.6	gi|297620302|ref|YP_003708439.1|	-	0.13	12.8	0.0	0.32	11.5	0.0	1.7	1	1	0	1	1	1	0	XdhC	Rossmann	domain
AsnA	PF03590.15	gi|297620303|ref|YP_003708440.1|	-	0.041	13.6	0.4	0.64	9.7	0.3	2.2	2	0	0	2	2	2	0	Aspartate-ammonia	ligase
Exo_endo_phos	PF03372.23	gi|297620303|ref|YP_003708440.1|	-	0.056	13.0	0.0	0.092	12.2	0.0	1.3	1	0	0	1	1	1	0	Endonuclease/Exonuclease/phosphatase	family
AAA_25	PF13481.6	gi|297620303|ref|YP_003708440.1|	-	0.17	11.5	0.0	0.27	10.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Legionella_OMP	PF05150.12	gi|297620304|ref|YP_003708441.1|	-	8.8e-22	77.3	0.2	1.1e-21	77.1	0.2	1.0	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
Wzz	PF02706.15	gi|297620305|ref|YP_003708442.1|	-	0.00036	20.8	0.1	0.002	18.4	0.1	2.4	1	0	0	1	1	1	1	Chain	length	determinant	protein
GNVR	PF13807.6	gi|297620305|ref|YP_003708442.1|	-	0.0036	17.2	0.0	0.012	15.5	0.0	1.9	1	0	0	1	1	1	1	G-rich	domain	on	putative	tyrosine	kinase
SoPB_HTH	PF18090.1	gi|297620305|ref|YP_003708442.1|	-	0.19	11.9	4.2	41	4.4	0.0	5.2	6	0	0	6	6	6	0	Centromere-binding	protein	HTH	domain
Nsp2a_N	PF17896.1	gi|297620305|ref|YP_003708442.1|	-	0.27	10.4	1.8	0.46	9.6	1.8	1.2	1	0	0	1	1	1	0	Replicase	polyprotein	1a	N-terminal	domain
Poly_export	PF02563.16	gi|297620306|ref|YP_003708443.1|	-	1.5e-08	34.7	0.4	8.1e-08	32.4	0.3	2.3	2	0	0	2	2	2	1	Polysaccharide	biosynthesis/export	protein
Wza_C	PF18412.1	gi|297620306|ref|YP_003708443.1|	-	1.8e-07	30.8	0.2	3.5e-07	29.8	0.2	1.4	1	0	0	1	1	1	1	Outer-membrane	lipoprotein	Wza	C-terminal	domain
SLBB	PF10531.9	gi|297620306|ref|YP_003708443.1|	-	2.3e-06	27.3	0.4	2.3e-05	24.2	0.0	2.5	3	0	0	3	3	3	1	SLBB	domain
Arm-DNA-bind_4	PF14657.6	gi|297620307|ref|YP_003708444.1|	-	0.035	13.9	0.1	0.04	13.7	0.1	1.1	1	0	0	1	1	1	0	Arm	DNA-binding	domain
Legionella_OMP	PF05150.12	gi|297620308|ref|YP_003708445.1|	-	3.5e-23	81.9	0.0	4.7e-23	81.5	0.0	1.1	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
Legionella_OMP	PF05150.12	gi|297620309|ref|YP_003708446.1|	-	1.9e-23	82.8	0.0	2.4e-23	82.5	0.0	1.1	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
Pom	PF17251.2	gi|297620309|ref|YP_003708446.1|	-	0.052	12.9	0.1	1.6	8.0	0.0	2.3	2	0	0	2	2	2	0	Protochlamydia	outer	membrane	protein
OMP_b-brl	PF13505.6	gi|297620309|ref|YP_003708446.1|	-	0.089	12.9	2.0	1.9	8.6	0.1	2.7	2	1	1	3	3	3	0	Outer	membrane	protein	beta-barrel	domain
Legionella_OMP	PF05150.12	gi|297620310|ref|YP_003708447.1|	-	6.6e-23	81.0	0.0	8.4e-23	80.7	0.0	1.1	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
BBP7	PF07585.11	gi|297620310|ref|YP_003708447.1|	-	0.0056	15.9	0.0	0.0092	15.2	0.0	1.3	1	0	0	1	1	1	1	Putative	beta	barrel	porin-7	(BBP7)
Glycos_transf_2	PF00535.26	gi|297620311|ref|YP_003708448.1|	-	5.1e-08	32.9	0.0	7.8e-08	32.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|297620311|ref|YP_003708448.1|	-	1.3e-06	28.5	0.0	1.8e-06	28.1	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.6	gi|297620311|ref|YP_003708448.1|	-	1.5e-05	24.6	0.0	2.2e-05	24.0	0.0	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_trans_2_3	PF13632.6	gi|297620311|ref|YP_003708448.1|	-	3.7e-05	23.7	0.0	5.1e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Epimerase	PF01370.21	gi|297620312|ref|YP_003708449.1|	-	2e-13	50.4	0.0	2.6e-13	50.0	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|297620312|ref|YP_003708449.1|	-	0.0015	18.0	0.0	0.0041	16.6	0.0	1.6	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Ribosomal_L18_c	PF14204.6	gi|297620312|ref|YP_003708449.1|	-	0.024	15.6	0.1	0.059	14.3	0.1	1.7	1	0	0	1	1	1	0	Ribosomal	L18	C-terminal	region
USP7_C2	PF14533.6	gi|297620312|ref|YP_003708449.1|	-	0.039	13.6	0.1	0.079	12.7	0.1	1.4	1	0	0	1	1	1	0	Ubiquitin-specific	protease	C-terminal
LpxI_N	PF17930.1	gi|297620312|ref|YP_003708449.1|	-	0.067	13.1	0.0	0.35	10.8	0.0	2.1	3	0	0	3	3	3	0	LpxI	N-terminal	domain
dTDP_sugar_isom	PF00908.17	gi|297620313|ref|YP_003708450.1|	-	4.6e-64	215.2	0.0	5.1e-64	215.0	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
GDP_Man_Dehyd	PF16363.5	gi|297620314|ref|YP_003708451.1|	-	1.1e-39	136.7	0.0	1.6e-39	136.2	0.0	1.2	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|297620314|ref|YP_003708451.1|	-	3.1e-32	111.9	0.0	4.2e-32	111.5	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.15	gi|297620314|ref|YP_003708451.1|	-	1.8e-16	60.1	0.0	1.6e-15	57.0	0.0	2.1	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
RmlD_sub_bind	PF04321.17	gi|297620314|ref|YP_003708451.1|	-	1e-09	37.9	0.0	1.8e-09	37.1	0.0	1.4	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.19	gi|297620314|ref|YP_003708451.1|	-	5.5e-09	35.4	0.0	7.9e-09	34.9	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.12	gi|297620314|ref|YP_003708451.1|	-	1.4e-08	34.3	0.2	3e-08	33.1	0.0	1.7	2	0	0	2	2	2	1	Male	sterility	protein
adh_short	PF00106.25	gi|297620314|ref|YP_003708451.1|	-	0.00035	20.1	0.0	0.63	9.5	0.0	2.6	2	1	0	2	2	2	2	short	chain	dehydrogenase
NTP_transferase	PF00483.23	gi|297620315|ref|YP_003708452.1|	-	3.2e-21	76.0	0.0	8.9e-21	74.6	0.0	1.5	1	1	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|297620315|ref|YP_003708452.1|	-	3.6e-06	27.4	0.0	5.1e-06	26.9	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Trp_Tyr_perm	PF03222.13	gi|297620316|ref|YP_003708453.1|	-	2.4e-96	323.2	33.2	2.8e-96	323.0	33.2	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Aa_trans	PF01490.18	gi|297620316|ref|YP_003708453.1|	-	4.4e-07	28.9	19.5	4.4e-07	28.9	19.5	1.7	1	1	0	1	1	1	1	Transmembrane	amino	acid	transporter	protein
Methyltransf_21	PF05050.12	gi|297620317|ref|YP_003708454.1|	-	1.8e-17	63.9	0.0	2.3e-17	63.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
V_cholerae_RfbT	PF05575.11	gi|297620317|ref|YP_003708454.1|	-	3.3e-07	29.9	0.0	4.4e-07	29.5	0.0	1.3	1	0	0	1	1	1	1	Vibrio	cholerae	RfbT	protein
Met_10	PF02475.16	gi|297620317|ref|YP_003708454.1|	-	0.00027	20.7	0.0	0.00046	20.0	0.0	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_18	PF12847.7	gi|297620317|ref|YP_003708454.1|	-	0.11	12.4	0.0	0.26	11.2	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
PNTB	PF02233.16	gi|297620318|ref|YP_003708455.1|	-	2.7e-184	613.4	20.9	3e-184	613.2	20.9	1.0	1	0	0	1	1	1	1	NAD(P)	transhydrogenase	beta	subunit
ATP1G1_PLM_MAT8	PF02038.16	gi|297620318|ref|YP_003708455.1|	-	0.069	12.6	0.2	0.069	12.6	0.2	2.7	4	0	0	4	4	4	0	ATP1G1/PLM/MAT8	family
DUF1440	PF07274.12	gi|297620318|ref|YP_003708455.1|	-	0.14	12.5	3.6	0.63	10.4	0.8	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1440)
PNTB_4TM	PF12769.7	gi|297620319|ref|YP_003708456.1|	-	1.5e-32	111.9	6.4	1.8e-32	111.7	6.4	1.0	1	0	0	1	1	1	1	4TM	region	of	pyridine	nucleotide	transhydrogenase,	mitoch
SCAMP	PF04144.13	gi|297620319|ref|YP_003708456.1|	-	0.066	13.5	4.0	0.075	13.3	4.0	1.1	1	0	0	1	1	1	0	SCAMP	family
DUF485	PF04341.12	gi|297620319|ref|YP_003708456.1|	-	4.1	7.4	7.9	0.31	11.0	1.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF485
AlaDh_PNT_C	PF01262.21	gi|297620320|ref|YP_003708457.1|	-	5.1e-66	222.0	0.4	8.4e-66	221.3	0.4	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
AlaDh_PNT_N	PF05222.15	gi|297620320|ref|YP_003708457.1|	-	1.6e-35	122.3	0.0	4.2e-35	121.0	0.0	1.7	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	N-terminal	domain
2-Hacid_dh_C	PF02826.19	gi|297620320|ref|YP_003708457.1|	-	5.8e-06	25.8	0.3	0.0029	17.0	0.1	2.7	1	1	1	2	2	2	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Pyr_redox_2	PF07992.14	gi|297620320|ref|YP_003708457.1|	-	9.9e-05	21.7	0.6	0.00017	20.9	0.1	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|297620320|ref|YP_003708457.1|	-	0.0004	20.6	0.1	0.00091	19.4	0.1	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.22	gi|297620320|ref|YP_003708457.1|	-	0.00053	19.2	0.3	0.0033	16.5	0.1	2.1	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.14	gi|297620320|ref|YP_003708457.1|	-	0.0024	16.6	0.1	0.0042	15.8	0.1	1.4	1	0	0	1	1	1	1	HI0933-like	protein
ADH_zinc_N	PF00107.26	gi|297620320|ref|YP_003708457.1|	-	0.0064	16.5	0.2	0.014	15.4	0.2	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Pyr_redox	PF00070.27	gi|297620320|ref|YP_003708457.1|	-	0.0079	16.7	0.1	0.022	15.3	0.1	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Glu_dehyd_C	PF16912.5	gi|297620320|ref|YP_003708457.1|	-	0.026	14.0	0.0	0.047	13.2	0.0	1.4	1	0	0	1	1	1	0	Glucose	dehydrogenase	C-terminus
NmrA	PF05368.13	gi|297620320|ref|YP_003708457.1|	-	0.026	14.1	0.6	0.047	13.2	0.6	1.4	1	0	0	1	1	1	0	NmrA-like	family
XdhC_C	PF13478.6	gi|297620320|ref|YP_003708457.1|	-	0.071	13.6	0.3	0.19	12.2	0.1	1.8	2	0	0	2	2	2	0	XdhC	Rossmann	domain
AMP-binding	PF00501.28	gi|297620321|ref|YP_003708458.1|	-	1.7e-83	280.6	0.0	2.1e-83	280.3	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
WG_beta_rep	PF14903.6	gi|297620321|ref|YP_003708458.1|	-	0.0052	17.0	0.0	0.014	15.6	0.0	1.8	1	0	0	1	1	1	1	WG	containing	repeat
MreC	PF04085.14	gi|297620322|ref|YP_003708459.1|	-	2.5e-33	115.1	0.0	4.7e-33	114.2	0.0	1.5	1	0	0	1	1	1	1	rod	shape-determining	protein	MreC
YabA	PF06156.13	gi|297620322|ref|YP_003708459.1|	-	0.35	11.5	2.5	0.6	10.8	2.5	1.3	1	0	0	1	1	1	0	Initiation	control	protein	YabA
Aminotran_1_2	PF00155.21	gi|297620323|ref|YP_003708460.1|	-	3.3e-75	253.5	0.0	3.7e-75	253.4	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
T6PP_N	PF18572.1	gi|297620323|ref|YP_003708460.1|	-	0.16	11.8	0.1	0.38	10.6	0.1	1.5	1	0	0	1	1	1	0	Trehalose-6-phosphate	phosphatase	N-terminal	helical	bundle	domain
NYN_YacP	PF05991.11	gi|297620324|ref|YP_003708461.1|	-	8.4e-21	74.6	1.3	2.1e-20	73.3	0.0	2.0	1	1	2	3	3	3	1	YacP-like	NYN	domain
DUF188	PF02639.14	gi|297620324|ref|YP_003708461.1|	-	0.092	12.4	0.0	0.26	11.0	0.0	1.8	1	1	0	1	1	1	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
Ham1p_like	PF01725.16	gi|297620325|ref|YP_003708462.1|	-	2.4e-58	197.1	0.1	2.7e-58	197.0	0.1	1.0	1	0	0	1	1	1	1	Ham1	family
AP_endonuc_2	PF01261.24	gi|297620325|ref|YP_003708462.1|	-	0.002	17.6	0.0	0.0034	16.9	0.0	1.3	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
GreA_GreB_N	PF03449.15	gi|297620326|ref|YP_003708463.1|	-	1.6e-18	66.6	2.7	5.4e-18	64.9	2.7	2.0	1	0	0	1	1	1	1	Transcription	elongation	factor,	N-terminal
GreA_GreB	PF01272.19	gi|297620326|ref|YP_003708463.1|	-	1.2e-16	60.4	0.1	4.7e-16	58.4	0.0	2.0	2	0	0	2	2	2	1	Transcription	elongation	factor,	GreA/GreB,	C-term
DUSP	PF06337.12	gi|297620326|ref|YP_003708463.1|	-	0.043	14.4	1.4	0.18	12.4	0.1	2.7	3	0	0	3	3	3	0	DUSP	domain
DUF3553	PF12073.8	gi|297620326|ref|YP_003708463.1|	-	0.051	13.3	0.1	0.11	12.2	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3553)
SET	PF00856.28	gi|297620328|ref|YP_003708465.1|	-	1.4e-18	67.9	0.0	1.1e-17	65.0	0.0	2.2	1	1	0	1	1	1	1	SET	domain
Ank_2	PF12796.7	gi|297620328|ref|YP_003708465.1|	-	9.8e-05	22.9	0.0	0.00019	21.9	0.0	1.4	1	0	0	1	1	1	1	Ankyrin	repeats	(3	copies)
Ank_4	PF13637.6	gi|297620328|ref|YP_003708465.1|	-	0.00022	21.7	0.0	0.00048	20.6	0.0	1.6	1	0	0	1	1	1	1	Ankyrin	repeats	(many	copies)
QSOX_Trx1	PF18108.1	gi|297620328|ref|YP_003708465.1|	-	0.0016	18.6	0.2	0.0034	17.5	0.1	1.7	2	0	0	2	2	2	1	QSOX	Trx-like	domain
SAF	PF08666.12	gi|297620328|ref|YP_003708465.1|	-	0.01	16.5	0.0	0.088	13.4	0.0	2.1	2	0	0	2	2	2	0	SAF	domain
Ank_3	PF13606.6	gi|297620328|ref|YP_003708465.1|	-	0.11	13.1	0.0	0.93	10.3	0.0	2.5	2	0	0	2	2	2	0	Ankyrin	repeat
UPF0051	PF01458.17	gi|297620329|ref|YP_003708466.1|	-	2.7e-66	223.4	0.1	3.5e-66	223.0	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.27	gi|297620330|ref|YP_003708467.1|	-	8.3e-22	78.2	0.0	1.1e-21	77.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|297620330|ref|YP_003708467.1|	-	9.1e-07	28.5	0.2	0.01	15.3	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|297620330|ref|YP_003708467.1|	-	7.2e-05	22.7	0.1	0.035	13.9	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|297620330|ref|YP_003708467.1|	-	0.00073	19.2	0.0	0.0019	17.9	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|297620330|ref|YP_003708467.1|	-	0.0022	18.5	0.6	0.0063	17.0	0.6	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|297620330|ref|YP_003708467.1|	-	0.0044	17.6	0.0	0.011	16.3	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
Rad17	PF03215.15	gi|297620330|ref|YP_003708467.1|	-	0.0049	16.8	0.0	0.007	16.3	0.0	1.3	1	0	0	1	1	1	1	Rad17	P-loop	domain
RsgA_GTPase	PF03193.16	gi|297620330|ref|YP_003708467.1|	-	0.0073	16.2	0.0	0.013	15.4	0.0	1.4	1	0	0	1	1	1	1	RsgA	GTPase
AAA_25	PF13481.6	gi|297620330|ref|YP_003708467.1|	-	0.009	15.6	0.1	0.022	14.3	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_27	PF13514.6	gi|297620330|ref|YP_003708467.1|	-	0.0094	15.6	0.0	0.017	14.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|297620330|ref|YP_003708467.1|	-	0.013	15.9	0.4	0.1	13.0	0.4	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|297620330|ref|YP_003708467.1|	-	0.034	14.4	0.4	0.23	11.7	0.4	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_13	PF13166.6	gi|297620330|ref|YP_003708467.1|	-	0.036	12.7	0.0	0.042	12.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|297620330|ref|YP_003708467.1|	-	0.038	14.1	0.0	0.057	13.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Cytidylate_kin	PF02224.18	gi|297620330|ref|YP_003708467.1|	-	0.041	13.6	0.0	0.071	12.8	0.0	1.3	1	0	0	1	1	1	0	Cytidylate	kinase
AAA_28	PF13521.6	gi|297620330|ref|YP_003708467.1|	-	0.044	14.0	0.0	0.071	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MutS_V	PF00488.21	gi|297620330|ref|YP_003708467.1|	-	0.1	12.6	0.2	7.5	6.5	0.0	2.1	2	0	0	2	2	2	0	MutS	domain	V
UPF0051	PF01458.17	gi|297620331|ref|YP_003708468.1|	-	2.2e-67	226.9	0.0	2.8e-67	226.6	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
Aminotran_5	PF00266.19	gi|297620332|ref|YP_003708469.1|	-	8.6e-146	485.6	0.0	9.8e-146	485.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|297620332|ref|YP_003708469.1|	-	2e-09	37.1	0.1	6.9e-09	35.3	0.0	1.8	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|297620332|ref|YP_003708469.1|	-	0.00023	19.9	0.0	0.00037	19.1	0.0	1.4	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|297620332|ref|YP_003708469.1|	-	0.00058	19.2	0.0	0.00078	18.8	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.17	gi|297620332|ref|YP_003708469.1|	-	0.027	13.8	0.4	0.041	13.2	0.3	1.4	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
ART	PF01129.18	gi|297620332|ref|YP_003708469.1|	-	0.046	13.0	0.1	0.077	12.3	0.1	1.4	1	0	0	1	1	1	0	NAD:arginine	ADP-ribosyltransferase
Sua5_yciO_yrdC	PF01300.18	gi|297620333|ref|YP_003708470.1|	-	8.8e-51	171.9	0.0	1.1e-50	171.6	0.0	1.1	1	0	0	1	1	1	1	Telomere	recombination
SUA5	PF03481.13	gi|297620333|ref|YP_003708470.1|	-	1.6e-17	64.3	0.0	9.1e-17	61.9	0.0	2.0	1	1	0	1	1	1	1	Putative	GTP-binding	controlling	metal-binding
CPT	PF07931.12	gi|297620334|ref|YP_003708471.1|	-	2.9e-36	124.9	0.0	3.4e-36	124.7	0.0	1.0	1	0	0	1	1	1	1	Chloramphenicol	phosphotransferase-like	protein
AAA_33	PF13671.6	gi|297620334|ref|YP_003708471.1|	-	0.00082	19.5	0.0	0.0023	18.1	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.10	gi|297620334|ref|YP_003708471.1|	-	0.0045	16.5	0.0	0.0065	16.0	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
dNK	PF01712.19	gi|297620334|ref|YP_003708471.1|	-	0.0055	16.6	0.0	1.7	8.4	0.0	2.1	2	0	0	2	2	2	2	Deoxynucleoside	kinase
APS_kinase	PF01583.20	gi|297620334|ref|YP_003708471.1|	-	0.0077	16.1	0.0	2.1	8.2	0.0	2.5	2	1	0	2	2	2	1	Adenylylsulphate	kinase
AAA_18	PF13238.6	gi|297620334|ref|YP_003708471.1|	-	0.01	16.4	0.0	0.032	14.8	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|297620334|ref|YP_003708471.1|	-	0.039	14.3	0.0	0.07	13.5	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.29	gi|297620334|ref|YP_003708471.1|	-	0.088	13.2	0.0	0.12	12.8	0.0	1.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF1433	PF07252.11	gi|297620334|ref|YP_003708471.1|	-	0.092	13.0	0.0	0.26	11.6	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1433)
Zeta_toxin	PF06414.12	gi|297620334|ref|YP_003708471.1|	-	0.16	11.2	0.0	2	7.7	0.0	2.0	2	0	0	2	2	2	0	Zeta	toxin
Bac_export_1	PF01311.20	gi|297620335|ref|YP_003708472.1|	-	3e-53	180.7	24.0	3.7e-53	180.5	24.0	1.0	1	0	0	1	1	1	1	Bacterial	export	proteins,	family	1
Bac_export_3	PF01313.19	gi|297620336|ref|YP_003708473.1|	-	4.3e-26	90.6	13.9	5e-26	90.4	13.9	1.1	1	0	0	1	1	1	1	Bacterial	export	proteins,	family	3
DUF2627	PF11118.8	gi|297620336|ref|YP_003708473.1|	-	0.51	10.9	5.0	0.95	10.1	5.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2627)
Promethin	PF16015.5	gi|297620336|ref|YP_003708473.1|	-	0.53	10.2	10.1	0.67	9.9	10.1	1.2	1	0	0	1	1	1	0	Promethin
TMPIT	PF07851.13	gi|297620336|ref|YP_003708473.1|	-	0.84	8.8	4.6	0.99	8.6	4.6	1.1	1	0	0	1	1	1	0	TMPIT-like	protein
FliP	PF00813.20	gi|297620337|ref|YP_003708474.1|	-	3.2e-63	213.1	15.7	4.6e-63	212.6	15.7	1.2	1	0	0	1	1	1	1	FliP	family
DUF4834	PF16118.5	gi|297620337|ref|YP_003708474.1|	-	0.078	14.0	0.6	1.1	10.2	0.3	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4834)
SLATT_5	PF18160.1	gi|297620337|ref|YP_003708474.1|	-	0.59	9.4	4.4	0.57	9.5	1.3	2.4	2	1	1	3	3	3	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	5
FliH	PF02108.16	gi|297620338|ref|YP_003708475.1|	-	6.1e-19	68.3	1.6	6.1e-19	68.3	1.6	1.6	2	0	0	2	2	2	1	Flagellar	assembly	protein	FliH
NolV	PF06635.12	gi|297620338|ref|YP_003708475.1|	-	0.0032	16.9	0.4	0.0044	16.4	0.4	1.1	1	0	0	1	1	1	1	Nodulation	protein	NolV
DUF2240	PF09999.9	gi|297620338|ref|YP_003708475.1|	-	0.038	13.6	2.8	0.81	9.3	0.2	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2240)
DUF5078	PF16877.5	gi|297620338|ref|YP_003708475.1|	-	0.088	13.3	0.5	1.9	8.9	0.0	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF5078)
DUF496	PF04363.12	gi|297620338|ref|YP_003708475.1|	-	0.27	11.3	4.3	0.2	11.7	0.6	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF496)
Med9	PF07544.13	gi|297620338|ref|YP_003708475.1|	-	0.31	11.2	4.7	0.35	11.0	1.2	2.5	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
BST2	PF16716.5	gi|297620338|ref|YP_003708475.1|	-	2.7	8.6	7.7	0.88	10.2	2.6	2.4	2	1	0	2	2	2	0	Bone	marrow	stromal	antigen	2
Mod_r	PF07200.13	gi|297620338|ref|YP_003708475.1|	-	3	8.0	9.6	0.59	10.2	2.9	2.4	2	1	1	3	3	3	0	Modifier	of	rudimentary	(Mod(r))	protein
DUF2203	PF09969.9	gi|297620338|ref|YP_003708475.1|	-	3.9	8.2	8.9	6.8	7.4	2.9	2.2	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
YscJ_FliF	PF01514.17	gi|297620340|ref|YP_003708477.1|	-	2e-28	99.4	0.0	4.3e-28	98.3	0.0	1.5	1	1	0	1	1	1	1	Secretory	protein	of	YscJ/FliF	family
DUF4834	PF16118.5	gi|297620340|ref|YP_003708477.1|	-	0.0061	17.5	0.0	0.019	15.9	0.0	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4834)
RR_TM4-6	PF06459.12	gi|297620340|ref|YP_003708477.1|	-	3.8	7.3	8.5	6.2	6.6	8.5	1.2	1	0	0	1	1	1	0	Ryanodine	Receptor	TM	4-6
DUF1186	PF06685.11	gi|297620342|ref|YP_003708479.1|	-	0.025	14.0	0.1	0.045	13.1	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1186)
HEAT_PBS	PF03130.16	gi|297620342|ref|YP_003708479.1|	-	0.08	13.7	4.3	12	6.9	0.1	4.0	4	0	0	4	4	4	0	PBS	lyase	HEAT-like	repeat
Radical_SAM	PF04055.21	gi|297620343|ref|YP_003708480.1|	-	2.2e-09	37.9	0.0	3e-09	37.5	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
LIAS_N	PF16881.5	gi|297620343|ref|YP_003708480.1|	-	1.3e-07	32.0	0.6	2.6e-07	31.0	0.2	1.8	2	0	0	2	2	2	1	N-terminal	domain	of	lipoyl	synthase	of	Radical_SAM	family
Pyr_redox_2	PF07992.14	gi|297620344|ref|YP_003708481.1|	-	9.3e-70	235.2	1.3	9.3e-70	235.2	1.3	1.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|297620344|ref|YP_003708481.1|	-	4.8e-33	113.7	1.4	1.2e-32	112.4	1.4	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
GIDA	PF01134.22	gi|297620344|ref|YP_003708481.1|	-	3.9e-20	72.3	6.9	8.7e-14	51.4	0.0	3.8	3	1	2	5	5	5	3	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.27	gi|297620344|ref|YP_003708481.1|	-	5.3e-19	68.6	6.0	3.4e-17	62.8	0.3	3.3	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|297620344|ref|YP_003708481.1|	-	6.1e-17	61.8	5.6	2.6e-13	49.9	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|297620344|ref|YP_003708481.1|	-	3.9e-11	42.3	5.9	7.6e-05	21.6	0.1	3.2	3	1	1	4	4	4	2	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|297620344|ref|YP_003708481.1|	-	3.8e-09	36.4	0.2	2.6e-08	33.7	0.1	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|297620344|ref|YP_003708481.1|	-	5e-08	33.1	2.1	0.0058	16.8	0.2	3.2	3	0	0	3	3	3	2	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.24	gi|297620344|ref|YP_003708481.1|	-	2.8e-06	27.2	10.6	0.059	12.9	0.5	3.5	3	0	0	3	3	3	3	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|297620344|ref|YP_003708481.1|	-	8.7e-06	25.1	12.7	1.1e-05	24.7	1.6	3.5	3	1	1	5	5	5	2	FAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|297620344|ref|YP_003708481.1|	-	0.00029	20.2	1.4	0.062	12.6	0.0	3.2	3	0	0	3	3	3	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.18	gi|297620344|ref|YP_003708481.1|	-	0.00093	19.1	3.9	0.0094	15.8	0.1	2.9	3	0	0	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Amino_oxidase	PF01593.24	gi|297620344|ref|YP_003708481.1|	-	0.00097	18.5	0.0	0.0025	17.2	0.0	1.5	1	1	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
Lycopene_cycl	PF05834.12	gi|297620344|ref|YP_003708481.1|	-	0.0023	17.0	8.1	1.1	8.3	0.6	3.3	2	1	1	3	3	3	2	Lycopene	cyclase	protein
ArgoL2	PF16488.5	gi|297620344|ref|YP_003708481.1|	-	0.026	14.8	0.4	3.2	8.2	0.0	3.5	3	0	0	3	3	3	0	Argonaute	linker	2	domain
FAD_binding_3	PF01494.19	gi|297620344|ref|YP_003708481.1|	-	0.048	12.9	4.9	3.6	6.7	0.4	3.1	2	1	1	3	3	3	0	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|297620344|ref|YP_003708481.1|	-	0.048	14.1	0.5	2.7	8.5	0.2	2.5	2	0	0	2	2	2	0	Putative	NAD(P)-binding
Thi4	PF01946.17	gi|297620344|ref|YP_003708481.1|	-	0.096	11.9	5.9	0.69	9.1	0.1	3.3	4	0	0	4	4	4	0	Thi4	family
NAD_binding_9	PF13454.6	gi|297620344|ref|YP_003708481.1|	-	1.1	9.2	0.0	1.1	9.2	0.0	2.8	4	0	0	4	4	2	0	FAD-NAD(P)-binding
Trp_halogenase	PF04820.14	gi|297620344|ref|YP_003708481.1|	-	2	7.2	8.5	0.77	8.5	0.4	2.8	2	1	1	3	3	3	0	Tryptophan	halogenase
Ntox35	PF15534.6	gi|297620345|ref|YP_003708482.1|	-	0.00093	19.6	0.6	0.00093	19.6	0.6	1.9	2	1	0	2	2	2	1	Bacterial	toxin	35
DWNN	PF08783.11	gi|297620346|ref|YP_003708483.1|	-	0.021	15.1	0.2	0.039	14.2	0.2	1.4	1	0	0	1	1	1	0	DWNN	domain
Na_Ca_ex_C	PF16494.5	gi|297620346|ref|YP_003708483.1|	-	0.029	14.8	0.1	0.053	14.0	0.1	1.4	1	0	0	1	1	1	0	C-terminal	extension	of	sodium/calcium	exchanger	domain
5_3_exonuc	PF01367.20	gi|297620346|ref|YP_003708483.1|	-	0.044	14.4	0.1	0.28	11.8	0.0	2.1	2	0	0	2	2	2	0	5'-3'	exonuclease,	C-terminal	SAM	fold
RGS_DHEX	PF18148.1	gi|297620346|ref|YP_003708483.1|	-	0.087	12.9	0.7	0.087	12.9	0.7	1.8	2	1	0	2	2	2	0	Regulator	of	G-protein	signalling	DHEX	domain
TPR_8	PF13181.6	gi|297620346|ref|YP_003708483.1|	-	0.16	12.3	0.2	0.16	12.3	0.2	2.7	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Peptidase_A17	PF05380.13	gi|297620346|ref|YP_003708483.1|	-	0.34	10.9	1.2	0.36	10.8	0.3	1.5	2	0	0	2	2	2	0	Pao	retrotransposon	peptidase
DUF1654	PF07867.11	gi|297620346|ref|YP_003708483.1|	-	0.76	9.6	4.7	0.88	9.3	0.3	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1654)
LANC_like	PF05147.13	gi|297620347|ref|YP_003708484.1|	-	0.05	12.2	0.0	0.091	11.3	0.0	1.4	1	0	0	1	1	1	0	Lanthionine	synthetase	C-like	protein
Phage_holin_3_6	PF07332.11	gi|297620348|ref|YP_003708485.1|	-	0.0011	19.0	0.4	0.0016	18.5	0.4	1.1	1	0	0	1	1	1	1	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
DZR	PF12773.7	gi|297620348|ref|YP_003708485.1|	-	0.03	14.4	2.3	0.039	14.0	2.3	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF5634	PF18681.1	gi|297620348|ref|YP_003708485.1|	-	0.066	13.6	0.0	0.091	13.1	0.0	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5634)
zf-ribbon_3	PF13248.6	gi|297620348|ref|YP_003708485.1|	-	0.096	12.1	1.9	0.16	11.4	1.9	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|297620348|ref|YP_003708485.1|	-	0.11	13.3	3.0	0.16	12.8	3.0	1.3	1	0	0	1	1	1	0	zinc-ribbon	family
DUF4115	PF13464.6	gi|297620349|ref|YP_003708486.1|	-	0.16	12.2	0.0	0.34	11.1	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4115)
SecA_DEAD	PF07517.14	gi|297620350|ref|YP_003708487.1|	-	3.8e-122	407.1	1.7	3.8e-122	407.1	1.7	1.7	2	0	0	2	2	2	1	SecA	DEAD-like	domain
SecA_SW	PF07516.13	gi|297620350|ref|YP_003708487.1|	-	3.8e-54	183.8	3.3	3.8e-54	183.8	3.3	2.7	2	1	0	2	2	2	1	SecA	Wing	and	Scaffold	domain
SecA_PP_bind	PF01043.20	gi|297620350|ref|YP_003708487.1|	-	6e-28	97.7	1.3	3.1e-27	95.4	1.3	2.3	1	0	0	1	1	1	1	SecA	preprotein	cross-linking	domain
SEC-C	PF02810.15	gi|297620350|ref|YP_003708487.1|	-	7.7e-11	41.7	11.0	1.3e-10	40.9	11.0	1.4	1	0	0	1	1	1	1	SEC-C	motif
DEAD	PF00270.29	gi|297620350|ref|YP_003708487.1|	-	0.0054	16.5	0.0	0.022	14.5	0.0	2.1	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|297620350|ref|YP_003708487.1|	-	0.0067	16.8	0.8	0.034	14.5	0.8	2.3	1	1	0	1	1	1	1	Helicase	conserved	C-terminal	domain
baeRF_family10	PF18854.1	gi|297620350|ref|YP_003708487.1|	-	0.024	14.9	0.8	0.78	10.0	0.1	3.0	2	0	0	2	2	2	0	Bacterial	archaeo-eukaryotic	release	factor	family	10
B5	PF03484.15	gi|297620350|ref|YP_003708487.1|	-	0.05	13.9	0.7	17	5.8	0.0	3.3	3	0	0	3	3	3	0	tRNA	synthetase	B5	domain
BaxI_1	PF12811.7	gi|297620351|ref|YP_003708488.1|	-	2e-77	259.9	15.2	2.2e-77	259.8	15.2	1.0	1	0	0	1	1	1	1	Bax	inhibitor	1	like
Bax1-I	PF01027.20	gi|297620351|ref|YP_003708488.1|	-	6.1e-10	39.3	23.6	7.6e-10	39.0	23.6	1.1	1	0	0	1	1	1	1	Inhibitor	of	apoptosis-promoting	Bax1
PS_Dcarbxylase	PF02666.15	gi|297620352|ref|YP_003708489.1|	-	4.9e-55	186.2	0.0	6e-55	185.9	0.0	1.1	1	0	0	1	1	1	1	Phosphatidylserine	decarboxylase
TatD_DNase	PF01026.21	gi|297620353|ref|YP_003708490.1|	-	5.2e-72	242.3	0.4	6e-72	242.1	0.4	1.0	1	0	0	1	1	1	1	TatD	related	DNase
OTU	PF02338.19	gi|297620354|ref|YP_003708491.1|	-	2.3e-05	24.9	0.1	4.4e-05	24.0	0.1	1.4	1	0	0	1	1	1	1	OTU-like	cysteine	protease
DUF4905	PF16248.5	gi|297620355|ref|YP_003708492.1|	-	0.093	12.6	0.1	0.19	11.7	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4905)
SNARE	PF05739.19	gi|297620355|ref|YP_003708492.1|	-	1.8	8.6	3.7	1.5	8.9	0.3	2.5	2	0	0	2	2	2	0	SNARE	domain
Fe-ADH	PF00465.19	gi|297620356|ref|YP_003708493.1|	-	3e-92	309.3	0.0	3.3e-92	309.1	0.0	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.6	gi|297620356|ref|YP_003708493.1|	-	5.9e-15	55.7	0.1	9e-07	28.8	0.0	2.1	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
FERM_M	PF00373.18	gi|297620356|ref|YP_003708493.1|	-	0.082	13.3	0.0	2.6	8.5	0.0	2.2	2	0	0	2	2	2	0	FERM	central	domain
Y_phosphatase	PF00102.27	gi|297620358|ref|YP_003708495.1|	-	2.8e-19	69.6	0.1	2.1e-16	60.2	0.0	2.6	2	0	0	2	2	2	2	Protein-tyrosine	phosphatase
DUF3783	PF12646.7	gi|297620358|ref|YP_003708495.1|	-	0.0035	17.3	0.2	0.06	13.3	0.2	2.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF3783)
Y_phosphatase3	PF13350.6	gi|297620358|ref|YP_003708495.1|	-	0.042	13.8	0.4	0.52	10.3	0.0	2.6	3	1	0	3	3	3	0	Tyrosine	phosphatase	family
Ribosomal_S6	PF01250.17	gi|297620358|ref|YP_003708495.1|	-	0.094	13.0	1.0	3.5	8.0	0.1	2.6	2	0	0	2	2	2	0	Ribosomal	protein	S6
DSPc	PF00782.20	gi|297620358|ref|YP_003708495.1|	-	0.13	12.1	0.0	0.13	12.1	0.0	2.9	3	0	0	3	3	3	0	Dual	specificity	phosphatase,	catalytic	domain
V-SNARE	PF05008.15	gi|297620358|ref|YP_003708495.1|	-	0.26	11.7	10.5	0.67	10.4	10.5	1.8	1	0	0	1	1	1	0	Vesicle	transport	v-SNARE	protein	N-terminus
DUF2730	PF10805.8	gi|297620358|ref|YP_003708495.1|	-	0.38	10.9	3.8	0.41	10.7	2.0	2.1	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF2730)
FAT	PF02259.23	gi|297620358|ref|YP_003708495.1|	-	0.41	9.8	5.8	0.11	11.7	1.7	1.9	2	0	0	2	2	2	0	FAT	domain
PTPlike_phytase	PF14566.6	gi|297620358|ref|YP_003708495.1|	-	0.78	9.8	3.8	0.88	9.7	0.7	2.6	1	1	1	2	2	2	0	Inositol	hexakisphosphate
P22_AR_N	PF10547.9	gi|297620358|ref|YP_003708495.1|	-	1.4	9.3	4.7	2.3	8.6	3.8	1.8	2	0	0	2	2	1	0	P22_AR	N-terminal	domain
DivIC	PF04977.15	gi|297620358|ref|YP_003708495.1|	-	6.3	6.6	14.3	7.2	6.5	5.1	2.8	2	1	1	3	3	3	0	Septum	formation	initiator
FlaC_arch	PF05377.11	gi|297620358|ref|YP_003708495.1|	-	7.3	7.1	10.8	3.5	8.1	5.4	3.2	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
AAA_11	PF13086.6	gi|297620358|ref|YP_003708495.1|	-	8	6.2	12.5	12	5.6	3.8	2.4	2	0	0	2	2	2	0	AAA	domain
BCL_N	PF04714.13	gi|297620359|ref|YP_003708496.1|	-	0.17	11.9	0.5	0.44	10.6	0.5	1.6	1	1	0	1	1	1	0	BCL7,	N-terminal	conserver	region
DsbC	PF11412.8	gi|297620360|ref|YP_003708497.1|	-	4.3e-18	65.5	0.0	7.3e-18	64.8	0.0	1.3	1	0	0	1	1	1	1	Disulphide	bond	corrector	protein	DsbC
DsbD	PF02683.15	gi|297620360|ref|YP_003708497.1|	-	5.1e-12	46.1	19.6	9.3e-12	45.3	19.6	1.4	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
Thioredoxin_7	PF13899.6	gi|297620360|ref|YP_003708497.1|	-	7.8e-12	45.2	0.0	1.4e-11	44.4	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.6	gi|297620360|ref|YP_003708497.1|	-	0.00041	20.8	0.0	0.00076	19.9	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.20	gi|297620360|ref|YP_003708497.1|	-	0.043	13.8	0.0	0.086	12.8	0.0	1.5	1	0	0	1	1	1	0	Thioredoxin
DUF3994	PF13159.6	gi|297620360|ref|YP_003708497.1|	-	0.16	12.5	0.0	0.52	10.9	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3994)
MotA_ExbB	PF01618.16	gi|297620361|ref|YP_003708498.1|	-	6.5e-31	106.7	1.6	9.4e-31	106.2	0.8	1.6	2	0	0	2	2	2	1	MotA/TolQ/ExbB	proton	channel	family
DUF2681	PF10883.8	gi|297620361|ref|YP_003708498.1|	-	0.025	15.0	1.0	0.48	10.9	0.2	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2681)
ExbD	PF02472.16	gi|297620362|ref|YP_003708499.1|	-	1e-16	61.3	0.0	1.2e-16	61.1	0.0	1.0	1	0	0	1	1	1	1	Biopolymer	transport	protein	ExbD/TolR
DUF2755	PF10954.8	gi|297620362|ref|YP_003708499.1|	-	0.062	13.2	0.0	7.7	6.5	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2755)
PD40	PF07676.12	gi|297620364|ref|YP_003708501.1|	-	1e-24	85.8	1.0	1.3e-07	31.3	0.2	5.3	6	0	0	6	6	6	4	WD40-like	Beta	Propeller	Repeat
Pectate_lyase22	PF14583.6	gi|297620364|ref|YP_003708501.1|	-	1e-07	31.0	0.0	0.58	8.8	0.0	4.6	3	2	2	5	5	5	3	Oligogalacturonate	lyase
DPPIV_N	PF00930.21	gi|297620364|ref|YP_003708501.1|	-	2.5e-05	23.2	0.0	0.021	13.6	0.0	3.7	1	1	3	4	4	4	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
Gmad1	PF10647.9	gi|297620364|ref|YP_003708501.1|	-	0.11	12.3	0.0	10	5.8	0.0	2.3	1	1	1	2	2	2	0	Lipoprotein	LpqB	beta-propeller	domain
DSPc	PF00782.20	gi|297620365|ref|YP_003708502.1|	-	5.1e-18	65.2	0.0	1.1e-17	64.1	0.0	1.5	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
CDKN3	PF05706.12	gi|297620365|ref|YP_003708502.1|	-	0.029	14.1	0.0	0.047	13.3	0.0	1.3	1	0	0	1	1	1	0	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
OmpA	PF00691.20	gi|297620366|ref|YP_003708503.1|	-	1.6e-19	70.0	0.0	2.3e-19	69.6	0.0	1.2	1	0	0	1	1	1	1	OmpA	family
DUF4762	PF15959.5	gi|297620366|ref|YP_003708503.1|	-	0.17	11.9	0.5	0.26	11.3	0.5	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4762)
LysM	PF01476.20	gi|297620367|ref|YP_003708504.1|	-	1.5e-15	57.0	0.0	3e-15	56.0	0.0	1.5	1	0	0	1	1	1	1	LysM	domain
TMF_DNA_bd	PF12329.8	gi|297620367|ref|YP_003708504.1|	-	0.00018	21.4	11.8	0.22	11.6	0.2	3.5	3	0	0	3	3	3	2	TATA	element	modulatory	factor	1	DNA	binding
ERM	PF00769.19	gi|297620367|ref|YP_003708504.1|	-	0.00047	20.0	6.4	0.00066	19.6	6.4	1.2	1	0	0	1	1	1	1	Ezrin/radixin/moesin	family
PspA_IM30	PF04012.12	gi|297620367|ref|YP_003708504.1|	-	0.00097	18.8	5.6	0.0014	18.3	5.2	1.4	1	1	0	1	1	1	1	PspA/IM30	family
DUF4972	PF16342.5	gi|297620367|ref|YP_003708504.1|	-	0.0036	17.0	4.0	0.0062	16.2	1.5	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4972)
Spc7	PF08317.11	gi|297620367|ref|YP_003708504.1|	-	0.0051	15.7	10.8	0.058	12.3	3.9	2.1	2	0	0	2	2	2	2	Spc7	kinetochore	protein
PI3K_P85_iSH2	PF16454.5	gi|297620367|ref|YP_003708504.1|	-	0.0077	15.8	9.7	0.84	9.2	9.8	2.5	1	1	0	1	1	1	1	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
DASH_Spc34	PF08657.10	gi|297620367|ref|YP_003708504.1|	-	0.0097	15.7	2.9	0.0097	15.7	2.9	1.5	2	0	0	2	2	1	1	DASH	complex	subunit	Spc34
EzrA	PF06160.12	gi|297620367|ref|YP_003708504.1|	-	0.013	13.7	0.9	0.013	13.7	0.9	2.2	1	1	1	2	2	2	0	Septation	ring	formation	regulator,	EzrA
Laminin_II	PF06009.12	gi|297620367|ref|YP_003708504.1|	-	0.013	15.5	11.5	0.19	11.7	1.8	2.9	1	1	2	3	3	3	0	Laminin	Domain	II
eIF3_N	PF09440.10	gi|297620367|ref|YP_003708504.1|	-	0.015	15.7	2.2	0.015	15.7	2.2	1.9	2	0	0	2	2	2	0	eIF3	subunit	6	N	terminal	domain
DUF4618	PF15397.6	gi|297620367|ref|YP_003708504.1|	-	0.026	14.0	9.7	0.1	12.0	1.7	2.4	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4618)
FTO_CTD	PF12934.7	gi|297620367|ref|YP_003708504.1|	-	0.029	14.1	1.2	0.073	12.8	0.2	1.8	1	1	0	2	2	2	0	FTO	C-terminal	domain
TRAF_BIRC3_bd	PF16673.5	gi|297620367|ref|YP_003708504.1|	-	0.059	13.2	9.1	2.3	8.1	1.8	3.2	3	0	0	3	3	3	0	TNF	receptor-associated	factor	BIRC3	binding	domain
DUF3450	PF11932.8	gi|297620367|ref|YP_003708504.1|	-	0.06	12.6	10.7	0.15	11.3	0.6	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3450)
DNA_pol_alpha_N	PF12254.8	gi|297620367|ref|YP_003708504.1|	-	0.069	13.2	0.3	0.25	11.4	0.3	2.1	1	1	0	1	1	1	0	DNA	polymerase	alpha	subunit	p180	N	terminal
KxDL	PF10241.9	gi|297620367|ref|YP_003708504.1|	-	0.075	13.3	2.4	2.3	8.5	0.3	3.0	3	0	0	3	3	3	0	Uncharacterized	conserved	protein
SKA1	PF07160.12	gi|297620367|ref|YP_003708504.1|	-	0.082	12.7	9.1	0.19	11.5	3.2	2.1	1	1	1	2	2	2	0	Spindle	and	kinetochore-associated	protein	1
AAA_13	PF13166.6	gi|297620367|ref|YP_003708504.1|	-	0.11	11.2	7.2	0.11	11.2	5.9	1.4	1	1	0	1	1	1	0	AAA	domain
DUF641	PF04859.12	gi|297620367|ref|YP_003708504.1|	-	0.11	12.8	0.3	0.11	12.8	0.3	2.4	2	1	0	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
DUF4407	PF14362.6	gi|297620367|ref|YP_003708504.1|	-	0.13	11.6	2.9	0.16	11.3	2.9	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Tropomyosin_1	PF12718.7	gi|297620367|ref|YP_003708504.1|	-	0.14	12.3	12.8	0.19	11.9	8.9	2.3	1	1	1	2	2	2	0	Tropomyosin	like
Fez1	PF06818.15	gi|297620367|ref|YP_003708504.1|	-	0.2	12.1	10.2	0.53	10.7	10.2	1.7	1	1	0	1	1	1	0	Fez1
Trimer_CC	PF08954.11	gi|297620367|ref|YP_003708504.1|	-	0.22	11.1	4.1	8.4	6.0	0.5	3.5	3	1	0	3	3	3	0	Trimerisation	motif
ATP-synt_ab_C	PF00306.27	gi|297620367|ref|YP_003708504.1|	-	0.3	11.4	6.2	0.06	13.7	2.1	1.8	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	chain,	C	terminal	domain
FH2	PF02181.23	gi|297620367|ref|YP_003708504.1|	-	0.3	10.1	5.8	0.92	8.6	0.3	2.2	1	1	2	3	3	3	0	Formin	Homology	2	Domain
APG6_N	PF17675.1	gi|297620367|ref|YP_003708504.1|	-	0.37	11.3	10.9	0.11	13.1	6.1	2.2	1	1	1	2	2	2	0	Apg6	coiled-coil	region
MerR-DNA-bind	PF09278.11	gi|297620367|ref|YP_003708504.1|	-	0.39	11.3	6.1	0.63	10.6	0.5	3.0	3	0	0	3	3	3	0	MerR,	DNA	binding
DUF948	PF06103.11	gi|297620367|ref|YP_003708504.1|	-	0.4	11.0	4.5	2	8.7	2.3	2.8	2	1	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
MitMem_reg	PF13012.6	gi|297620367|ref|YP_003708504.1|	-	0.44	11.0	6.2	1.2	9.6	0.2	2.4	1	1	1	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
FlaC_arch	PF05377.11	gi|297620367|ref|YP_003708504.1|	-	0.45	10.9	13.2	10	6.6	0.9	4.4	2	1	0	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
ADIP	PF11559.8	gi|297620367|ref|YP_003708504.1|	-	0.61	10.2	11.2	2.4	8.3	5.1	2.7	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Atg14	PF10186.9	gi|297620367|ref|YP_003708504.1|	-	0.64	9.1	7.8	0.96	8.5	7.8	1.4	1	1	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
OmpH	PF03938.14	gi|297620367|ref|YP_003708504.1|	-	0.66	10.3	8.4	0.96	9.8	4.8	2.1	1	1	1	2	2	2	0	Outer	membrane	protein	(OmpH-like)
DUF16	PF01519.16	gi|297620367|ref|YP_003708504.1|	-	0.74	10.3	13.7	1.3	9.5	1.4	2.9	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
HIP1_clath_bdg	PF16515.5	gi|297620367|ref|YP_003708504.1|	-	1	10.0	12.7	0.5	11.0	0.7	2.4	2	1	0	2	2	2	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
Med9	PF07544.13	gi|297620367|ref|YP_003708504.1|	-	1.2	9.3	7.7	1.5	8.9	0.3	2.7	2	1	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Lebercilin	PF15619.6	gi|297620367|ref|YP_003708504.1|	-	1.2	8.8	17.1	2.8	7.6	2.8	2.3	1	1	0	2	2	2	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
Fib_alpha	PF08702.10	gi|297620367|ref|YP_003708504.1|	-	1.2	9.3	11.3	8.9	6.5	0.8	2.6	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
TMPIT	PF07851.13	gi|297620367|ref|YP_003708504.1|	-	1.3	8.2	8.6	0.37	10.0	2.7	2.2	1	1	1	2	2	2	0	TMPIT-like	protein
Exonuc_VII_L	PF02601.15	gi|297620367|ref|YP_003708504.1|	-	1.4	8.4	8.0	2.4	7.7	8.0	1.4	1	1	0	1	1	1	0	Exonuclease	VII,	large	subunit
DivIVA	PF05103.13	gi|297620367|ref|YP_003708504.1|	-	1.7	8.7	10.3	0.44	10.6	0.5	2.5	2	1	0	2	2	2	0	DivIVA	protein
TMF_TATA_bd	PF12325.8	gi|297620367|ref|YP_003708504.1|	-	2.1	8.6	14.7	7.4	6.8	10.3	2.6	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
ATG16	PF08614.11	gi|297620367|ref|YP_003708504.1|	-	2.1	8.5	14.5	3.4	7.8	2.3	2.5	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
COG2	PF06148.11	gi|297620367|ref|YP_003708504.1|	-	2.2	8.4	7.2	5	7.2	2.6	2.6	2	1	1	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Jnk-SapK_ap_N	PF09744.9	gi|297620367|ref|YP_003708504.1|	-	2.3	8.4	15.3	0.94	9.7	6.1	2.2	1	1	1	2	2	2	0	JNK_SAPK-associated	protein-1
SlyX	PF04102.12	gi|297620367|ref|YP_003708504.1|	-	2.7	8.7	14.2	17	6.1	5.2	3.7	2	1	1	3	3	3	0	SlyX
XhlA	PF10779.9	gi|297620367|ref|YP_003708504.1|	-	2.8	8.2	13.3	12	6.2	2.4	3.8	2	1	2	4	4	4	0	Haemolysin	XhlA
ABC_tran_CTD	PF16326.5	gi|297620367|ref|YP_003708504.1|	-	3.7	7.9	11.0	16	5.8	3.3	2.8	1	1	1	2	2	2	0	ABC	transporter	C-terminal	domain
Nup54	PF13874.6	gi|297620367|ref|YP_003708504.1|	-	3.9	7.6	13.2	1.7e+02	2.2	13.2	2.6	1	1	0	1	1	1	0	Nucleoporin	complex	subunit	54
FAM76	PF16046.5	gi|297620367|ref|YP_003708504.1|	-	6.8	5.9	7.1	83	2.4	7.5	2.0	1	1	0	1	1	1	0	FAM76	protein
Asp_Glu_race	PF01177.22	gi|297620368|ref|YP_003708505.1|	-	4.7e-35	121.5	0.2	6.2e-35	121.1	0.2	1.1	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
DeoC	PF01791.9	gi|297620369|ref|YP_003708506.1|	-	1.1e-09	38.3	0.0	1.5e-09	37.8	0.0	1.2	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
S-AdoMet_synt_C	PF02773.16	gi|297620371|ref|YP_003708508.1|	-	4.3e-65	217.9	0.1	6.5e-65	217.3	0.1	1.3	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase,	C-terminal	domain
S-AdoMet_synt_N	PF00438.20	gi|297620371|ref|YP_003708508.1|	-	4.3e-43	146.0	0.1	8e-43	145.2	0.1	1.5	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase,	N-terminal	domain
S-AdoMet_synt_M	PF02772.16	gi|297620371|ref|YP_003708508.1|	-	5.9e-43	145.9	0.0	1.7e-42	144.4	0.0	1.8	2	0	0	2	2	2	1	S-adenosylmethionine	synthetase,	central	domain
AdoMet_Synthase	PF01941.19	gi|297620371|ref|YP_003708508.1|	-	0.14	10.9	0.2	0.55	9.0	0.1	1.9	1	1	1	2	2	2	0	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
Response_reg	PF00072.24	gi|297620372|ref|YP_003708509.1|	-	1.1e-23	83.6	0.1	1.5e-23	83.1	0.1	1.2	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Trans_reg_C	PF00486.28	gi|297620372|ref|YP_003708509.1|	-	5.3e-23	80.9	0.2	1.1e-22	79.9	0.0	1.6	2	0	0	2	2	2	1	Transcriptional	regulatory	protein,	C	terminal
TPR_19	PF14559.6	gi|297620373|ref|YP_003708510.1|	-	2.7e-26	91.8	30.7	0.012	16.2	0.2	12.7	12	1	0	13	13	12	7	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|297620373|ref|YP_003708510.1|	-	3.1e-22	77.4	26.8	0.017	15.9	0.1	16.4	13	3	7	20	20	18	7	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297620373|ref|YP_003708510.1|	-	1.4e-20	71.7	27.1	0.0011	18.9	0.0	15.2	18	0	0	18	18	16	3	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297620373|ref|YP_003708510.1|	-	8.7e-18	63.3	17.2	0.044	13.6	0.0	13.6	15	0	0	15	15	15	4	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297620373|ref|YP_003708510.1|	-	9.4e-17	59.8	22.8	0.021	15.0	0.2	13.2	13	0	0	13	13	11	2	Tetratricopeptide	repeat
DUF1347	PF07079.11	gi|297620373|ref|YP_003708510.1|	-	7.2e-16	57.9	11.9	1.3e-15	57.1	11.9	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1347)
ANAPC3	PF12895.7	gi|297620373|ref|YP_003708510.1|	-	3.4e-15	56.0	12.2	0.35	11.1	0.1	9.7	8	2	1	9	9	9	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_16	PF13432.6	gi|297620373|ref|YP_003708510.1|	-	9e-12	45.4	17.4	0.24	12.1	0.4	11.4	11	1	1	13	13	13	3	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|297620373|ref|YP_003708510.1|	-	1.3e-10	40.7	17.7	0.00027	20.5	0.0	9.3	11	0	0	11	11	11	2	TPR	repeat
TPR_12	PF13424.6	gi|297620373|ref|YP_003708510.1|	-	1.6e-10	41.1	27.4	0.11	12.8	0.3	12.7	11	2	3	14	14	12	5	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|297620373|ref|YP_003708510.1|	-	3.3e-09	36.1	2.1	0.46	10.6	0.0	10.0	11	0	0	11	11	10	1	Tetratricopeptide	repeat
ChAPs	PF09295.10	gi|297620373|ref|YP_003708510.1|	-	1.2e-07	31.0	0.1	1.2e-07	31.0	0.1	3.3	4	1	0	4	4	4	1	ChAPs	(Chs5p-Arf1p-binding	proteins)
TPR_17	PF13431.6	gi|297620373|ref|YP_003708510.1|	-	1.7e-06	28.0	17.4	1.3	9.5	0.0	10.5	12	0	0	12	12	12	2	Tetratricopeptide	repeat
TPR_4	PF07721.14	gi|297620373|ref|YP_003708510.1|	-	0.0002	21.6	7.5	24	5.9	0.0	7.9	9	0	0	9	9	9	0	Tetratricopeptide	repeat
PPR	PF01535.20	gi|297620373|ref|YP_003708510.1|	-	0.00035	20.6	4.3	0.14	12.4	0.1	6.5	8	0	0	8	8	5	1	PPR	repeat
TPR_9	PF13371.6	gi|297620373|ref|YP_003708510.1|	-	0.00067	19.8	12.9	0.12	12.6	0.0	6.7	6	1	2	8	8	7	2	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|297620373|ref|YP_003708510.1|	-	0.0033	16.7	23.5	0.024	13.9	0.1	6.2	7	2	0	7	7	7	2	Tetratricopeptide	repeat
SRP_TPR_like	PF17004.5	gi|297620373|ref|YP_003708510.1|	-	0.0042	17.1	21.3	1.1	9.3	0.0	6.4	7	0	0	7	7	7	2	Putative	TPR-like	repeat
TPR_20	PF14561.6	gi|297620373|ref|YP_003708510.1|	-	0.37	11.1	14.6	40	4.6	0.0	7.5	7	2	2	9	9	9	0	Tetratricopeptide	repeat
PPR_2	PF13041.6	gi|297620373|ref|YP_003708510.1|	-	2.7	8.2	5.1	5.2	7.4	0.0	4.1	5	0	0	5	5	4	0	PPR	repeat	family
TPR_10	PF13374.6	gi|297620373|ref|YP_003708510.1|	-	7.3	6.6	19.8	23	5.0	0.2	8.4	10	0	0	10	10	9	0	Tetratricopeptide	repeat
EamA	PF00892.20	gi|297620374|ref|YP_003708511.1|	-	8.7e-37	126.3	43.0	2e-21	76.6	19.5	2.0	2	0	0	2	2	2	2	EamA-like	transporter	family
TPT	PF03151.16	gi|297620374|ref|YP_003708511.1|	-	0.00054	19.4	21.3	0.059	12.7	14.0	2.1	1	1	1	2	2	2	2	Triose-phosphate	Transporter	family
Nuc_sug_transp	PF04142.15	gi|297620374|ref|YP_003708511.1|	-	0.28	10.3	17.1	0.033	13.3	12.3	1.7	1	1	0	2	2	2	0	Nucleotide-sugar	transporter
TPR_17	PF13431.6	gi|297620375|ref|YP_003708512.1|	-	2.3e-09	37.0	0.1	0.0072	16.6	0.0	3.8	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|297620375|ref|YP_003708512.1|	-	1e-08	34.7	1.0	7e-05	22.4	0.1	3.7	3	1	1	4	4	4	2	TPR	repeat
TPR_14	PF13428.6	gi|297620375|ref|YP_003708512.1|	-	2.2e-06	28.0	3.3	0.00025	21.6	0.0	4.6	4	1	2	6	6	5	2	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297620375|ref|YP_003708512.1|	-	2.7e-06	27.8	0.3	0.091	13.3	0.1	4.0	3	1	1	4	4	4	1	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297620375|ref|YP_003708512.1|	-	9.8e-06	25.9	0.3	0.018	15.7	0.1	3.4	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297620375|ref|YP_003708512.1|	-	2.7e-05	24.0	1.2	0.5	10.7	0.0	4.0	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297620375|ref|YP_003708512.1|	-	0.00018	21.3	3.1	0.31	11.3	0.3	3.8	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|297620375|ref|YP_003708512.1|	-	0.0021	18.7	0.0	0.009	16.6	0.0	2.2	1	0	0	1	1	1	1	Tetratricopeptide	repeat
DUF630	PF04783.12	gi|297620375|ref|YP_003708512.1|	-	0.01	16.0	0.0	0.028	14.6	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF630)
TPR_1	PF00515.28	gi|297620375|ref|YP_003708512.1|	-	0.046	13.6	5.9	0.47	10.4	0.3	3.6	5	0	0	5	5	5	0	Tetratricopeptide	repeat
TPR_20	PF14561.6	gi|297620375|ref|YP_003708512.1|	-	0.083	13.2	0.0	2.7	8.4	0.0	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
RseC_MucC	PF04246.12	gi|297620375|ref|YP_003708512.1|	-	0.29	11.1	0.5	0.48	10.4	0.5	1.3	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
TPR_4	PF07721.14	gi|297620375|ref|YP_003708512.1|	-	0.31	11.8	2.7	29	5.7	0.0	3.8	4	0	0	4	4	4	0	Tetratricopeptide	repeat
DUF4864	PF16156.5	gi|297620376|ref|YP_003708513.1|	-	4.3e-34	117.2	2.8	3.2e-08	34.2	0.1	4.2	4	0	0	4	4	4	4	Domain	of	unknown	function	(DUF4864)
MlaC	PF05494.12	gi|297620376|ref|YP_003708513.1|	-	1.2e-08	34.9	0.5	1.5	8.6	0.0	4.7	4	0	0	4	4	4	4	MlaC	protein
DUF4101	PF13355.6	gi|297620376|ref|YP_003708513.1|	-	2e-06	28.2	1.1	0.13	12.7	0.0	3.9	4	0	0	4	4	4	2	Protein	of	unknown	function	(DUF4101)
DUF4878	PF12870.7	gi|297620376|ref|YP_003708513.1|	-	0.00011	22.5	0.7	4.6	7.6	0.0	5.0	5	1	0	5	5	5	2	Domain	of	unknown	function	(DUF4878)
DUF3828	PF12883.7	gi|297620376|ref|YP_003708513.1|	-	0.00016	22.0	1.6	13	6.2	0.0	4.5	4	0	0	4	4	4	1	Protein	of	unknown	function	(DUF3828)
SnoaL_4	PF13577.6	gi|297620376|ref|YP_003708513.1|	-	0.00025	21.2	3.1	5.3	7.2	0.0	4.9	5	0	0	5	5	5	1	SnoaL-like	domain
DUF4783	PF16022.5	gi|297620376|ref|YP_003708513.1|	-	0.0012	18.9	2.2	3.4	7.9	0.1	4.1	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF4783)
Endopep_inhib	PF16800.5	gi|297620376|ref|YP_003708513.1|	-	0.075	13.0	0.4	22	5.0	0.0	3.5	3	0	0	3	3	3	0	IseA	DL-endopeptidase	inhibitor
CMAS	PF02353.20	gi|297620376|ref|YP_003708513.1|	-	0.25	10.6	2.0	1.7	7.9	0.0	2.5	2	1	1	3	3	3	0	Mycolic	acid	cyclopropane	synthetase
DUF1128	PF06569.11	gi|297620376|ref|YP_003708513.1|	-	0.45	10.5	3.3	8.9	6.4	0.1	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1128)
DUF3887	PF13026.6	gi|297620376|ref|YP_003708513.1|	-	0.78	10.6	4.5	35	5.3	0.0	3.5	4	0	0	4	4	3	0	Protein	of	unknown	function	(DUF3887)
DUF4200	PF13863.6	gi|297620376|ref|YP_003708513.1|	-	4.3	7.8	7.9	3.4	8.1	0.2	3.2	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4200)
WG_beta_rep	PF14903.6	gi|297620376|ref|YP_003708513.1|	-	6.7	7.1	6.1	54	4.2	0.6	4.0	4	1	1	5	5	5	0	WG	containing	repeat
Cons_hypoth95	PF03602.15	gi|297620377|ref|YP_003708514.1|	-	9.6e-49	165.5	0.0	1.1e-48	165.3	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
MTS	PF05175.14	gi|297620377|ref|YP_003708514.1|	-	8.6e-08	31.9	0.0	1.1e-07	31.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.6	gi|297620377|ref|YP_003708514.1|	-	3e-06	27.1	0.0	3.8e-06	26.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297620377|ref|YP_003708514.1|	-	9.9e-06	26.2	0.0	1.9e-05	25.3	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
UPF0020	PF01170.18	gi|297620377|ref|YP_003708514.1|	-	2.9e-05	23.8	0.0	0.00076	19.2	0.0	2.1	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_24	PF13578.6	gi|297620377|ref|YP_003708514.1|	-	4.1e-05	24.5	0.0	6.3e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltrans_SAM	PF10672.9	gi|297620377|ref|YP_003708514.1|	-	4.2e-05	22.9	0.0	5.6e-05	22.4	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine-dependent	methyltransferase
MethyltransfD12	PF02086.15	gi|297620377|ref|YP_003708514.1|	-	0.0003	20.6	0.5	0.13	11.9	0.0	2.1	1	1	1	2	2	2	2	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_15	PF09445.10	gi|297620377|ref|YP_003708514.1|	-	0.00055	19.6	0.0	0.00078	19.1	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
PrmA	PF06325.13	gi|297620377|ref|YP_003708514.1|	-	0.0051	16.3	0.0	0.0068	15.8	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_18	PF12847.7	gi|297620377|ref|YP_003708514.1|	-	0.09	12.7	0.0	0.12	12.3	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
DUF43	PF01861.16	gi|297620377|ref|YP_003708514.1|	-	0.11	11.8	0.0	0.15	11.3	0.0	1.1	1	0	0	1	1	1	0	Branched-chain	polyamine	synthase	A	C-terminal	domain
N6_N4_Mtase	PF01555.18	gi|297620377|ref|YP_003708514.1|	-	0.14	11.8	0.0	14	5.3	0.0	2.2	2	0	0	2	2	2	0	DNA	methylase
Methyltrans_SAM	PF10672.9	gi|297620378|ref|YP_003708515.1|	-	0.019	14.2	0.0	0.059	12.5	0.0	1.7	1	1	1	2	2	2	0	S-adenosylmethionine-dependent	methyltransferase
CENP-Q	PF13094.6	gi|297620378|ref|YP_003708515.1|	-	0.84	9.8	4.0	0.21	11.8	0.5	1.8	2	0	0	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Transp_cyt_pur	PF02133.15	gi|297620379|ref|YP_003708516.1|	-	0.00024	20.0	27.5	0.0014	17.5	24.7	2.3	1	1	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
Bac_export_2	PF01312.19	gi|297620379|ref|YP_003708516.1|	-	3.1	6.9	5.8	1.4	8.0	3.1	1.8	1	1	0	1	1	1	0	FlhB	HrpN	YscU	SpaS	Family
SP24	PF16504.5	gi|297620379|ref|YP_003708516.1|	-	5.6	7.0	7.2	0.84	9.7	1.0	2.6	3	0	0	3	3	3	0	Putative	virion	membrane	protein	of	plant	and	insect	virus
DUF917	PF06032.12	gi|297620380|ref|YP_003708517.1|	-	4.1e-103	344.9	0.0	4.9e-103	344.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF917)
Rrp44_CSD1	PF17216.3	gi|297620380|ref|YP_003708517.1|	-	0.13	12.0	0.0	0.24	11.1	0.0	1.3	1	0	0	1	1	1	0	Rrp44-like	cold	shock	domain
Hydantoinase_A	PF01968.18	gi|297620381|ref|YP_003708518.1|	-	5.7e-33	114.4	5.5	2.3e-28	99.3	0.0	3.4	3	1	0	3	3	3	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.13	gi|297620381|ref|YP_003708518.1|	-	2e-31	109.1	0.5	3.5e-28	98.5	0.0	2.5	2	0	0	2	2	2	2	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.6	gi|297620381|ref|YP_003708518.1|	-	0.00024	19.8	0.8	0.14	10.8	0.0	2.4	2	0	0	2	2	2	2	MutL	protein
FtsA	PF14450.6	gi|297620381|ref|YP_003708518.1|	-	0.0025	18.2	6.0	0.9	10.0	0.4	3.6	3	2	2	5	5	5	2	Cell	division	protein	FtsA
DDR	PF08841.10	gi|297620381|ref|YP_003708518.1|	-	0.0066	15.5	6.3	0.68	8.9	0.8	3.1	3	0	0	3	3	3	2	Diol	dehydratase	reactivase	ATPase-like	domain
BcrAD_BadFG	PF01869.20	gi|297620381|ref|YP_003708518.1|	-	0.034	13.6	0.0	0.034	13.6	0.0	2.4	3	0	0	3	3	3	0	BadF/BadG/BcrA/BcrD	ATPase	family
Actin	PF00022.19	gi|297620381|ref|YP_003708518.1|	-	0.06	11.9	0.9	0.18	10.4	0.0	2.1	3	0	0	3	3	3	0	Actin
Ppx-GppA	PF02541.16	gi|297620381|ref|YP_003708518.1|	-	0.41	10.0	2.1	2.6	7.4	0.3	2.6	2	1	1	3	3	3	0	Ppx/GppA	phosphatase	family
ODR4-like	PF14778.6	gi|297620382|ref|YP_003708519.1|	-	0.0085	15.1	0.2	0.014	14.4	0.2	1.3	1	0	0	1	1	1	1	Olfactory	receptor	4-like
Read-through	PF16814.5	gi|297620382|ref|YP_003708519.1|	-	0.19	11.5	0.0	0.4	10.5	0.0	1.4	1	0	0	1	1	1	0	Read-through	domain
Glyco_hydro_65m	PF03632.15	gi|297620383|ref|YP_003708520.1|	-	5.9e-134	446.8	0.2	7.8e-134	446.4	0.2	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	65	central	catalytic	domain
Glyco_hydro_65N	PF03636.15	gi|297620383|ref|YP_003708520.1|	-	2e-69	233.7	0.0	3.5e-69	232.9	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	65,	N-terminal	domain
Glyco_hydro_65C	PF03633.15	gi|297620383|ref|YP_003708520.1|	-	7.4e-11	41.8	0.0	6.9e-10	38.7	0.0	2.6	2	0	0	2	2	2	1	Glycosyl	hydrolase	family	65,	C-terminal	domain
HxlR	PF01638.17	gi|297620383|ref|YP_003708520.1|	-	0.12	12.2	0.0	1.6	8.6	0.0	2.4	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
Trehalose_PPase	PF02358.16	gi|297620384|ref|YP_003708521.1|	-	1e-46	159.0	0.0	1.8e-46	158.1	0.0	1.4	1	0	0	1	1	1	1	Trehalose-phosphatase
HAD_2	PF13419.6	gi|297620384|ref|YP_003708521.1|	-	6.8e-19	68.6	3.7	4.4e-17	62.7	0.1	3.8	4	1	0	4	4	4	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|297620384|ref|YP_003708521.1|	-	1.3e-16	61.5	7.5	6.3e-15	56.0	0.1	4.3	3	2	0	3	3	3	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|297620384|ref|YP_003708521.1|	-	1.3e-07	31.6	0.2	3.5e-07	30.2	0.2	1.8	1	0	0	1	1	1	1	HAD-hyrolase-like
ADH_zinc_N	PF00107.26	gi|297620384|ref|YP_003708521.1|	-	9.9e-06	25.6	0.3	0.0026	17.7	0.1	2.6	2	0	0	2	2	2	2	Zinc-binding	dehydrogenase
Hydrolase_3	PF08282.12	gi|297620384|ref|YP_003708521.1|	-	0.00055	19.8	0.0	0.76	9.5	0.0	2.9	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|297620384|ref|YP_003708521.1|	-	0.0011	19.4	1.9	0.63	10.4	0.0	3.9	3	1	0	3	3	3	1	haloacid	dehalogenase-like	hydrolase
HAD_SAK_2	PF18143.1	gi|297620384|ref|YP_003708521.1|	-	0.064	13.6	0.3	14	6.0	0.0	3.4	3	0	0	3	3	3	0	HAD	domain	in	Swiss	Army	Knife	RNA	repair	proteins
DUF705	PF05152.12	gi|297620384|ref|YP_003708521.1|	-	0.13	11.7	0.0	0.54	9.7	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF705)
LAB_N	PF07578.11	gi|297620385|ref|YP_003708522.1|	-	3.1e-45	152.1	16.7	3e-23	81.7	6.4	2.3	2	0	0	2	2	2	2	Lipid	A	Biosynthesis	N-terminal	domain
Abhydrolase_9_N	PF15420.6	gi|297620385|ref|YP_003708522.1|	-	0.14	12.2	5.2	0.13	12.2	2.4	2.0	1	1	1	2	2	2	0	Alpha/beta-hydrolase	family	N-terminus
DUF3382	PF11862.8	gi|297620385|ref|YP_003708522.1|	-	2.4	8.5	6.6	3.4	8.0	0.3	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3382)
MFS_1	PF07690.16	gi|297620387|ref|YP_003708524.1|	-	2.4e-22	79.3	52.4	4e-22	78.6	47.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|297620387|ref|YP_003708524.1|	-	1.6	7.0	14.6	0.021	13.2	4.0	2.2	2	0	0	2	2	2	0	Transmembrane	secretion	effector
DUF2115	PF09888.9	gi|297620388|ref|YP_003708525.1|	-	0.06	13.9	0.2	0.068	13.7	0.2	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
DUF4148	PF13663.6	gi|297620388|ref|YP_003708525.1|	-	0.079	13.1	0.1	0.23	11.7	0.1	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4148)
Methyltr_RsmB-F	PF01189.17	gi|297620390|ref|YP_003708527.1|	-	2.3e-30	105.7	0.0	3.8e-30	105.0	0.0	1.2	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
NusB	PF01029.18	gi|297620390|ref|YP_003708527.1|	-	9.6e-20	71.2	1.4	1.9e-19	70.3	0.2	1.9	2	0	0	2	2	2	1	NusB	family
Methyltransf_31	PF13847.6	gi|297620390|ref|YP_003708527.1|	-	0.004	17.0	0.0	0.035	13.9	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|297620390|ref|YP_003708527.1|	-	0.0083	15.7	0.0	0.018	14.6	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.6	gi|297620390|ref|YP_003708527.1|	-	0.012	16.3	0.0	0.027	15.2	0.0	1.7	1	0	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.14	gi|297620390|ref|YP_003708527.1|	-	0.015	14.8	0.0	0.65	9.5	0.0	2.5	2	1	0	2	2	2	0	Methyltransferase	small	domain
FtsJ	PF01728.19	gi|297620390|ref|YP_003708527.1|	-	0.054	13.6	0.0	0.21	11.7	0.0	2.0	2	0	0	2	2	2	0	FtsJ-like	methyltransferase
VraX	PF17412.2	gi|297620390|ref|YP_003708527.1|	-	0.2	11.3	0.1	0.36	10.5	0.1	1.4	1	0	0	1	1	1	0	Family	of	unknown	function
adh_short	PF00106.25	gi|297620391|ref|YP_003708528.1|	-	3.8e-43	147.2	0.0	5.5e-43	146.7	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|297620391|ref|YP_003708528.1|	-	1.5e-25	90.2	0.0	2.5e-25	89.4	0.0	1.3	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
Epimerase	PF01370.21	gi|297620391|ref|YP_003708528.1|	-	9.4e-07	28.5	0.0	0.00056	19.4	0.0	2.5	1	1	1	2	2	2	2	NAD	dependent	epimerase/dehydratase	family
KR	PF08659.10	gi|297620391|ref|YP_003708528.1|	-	0.00043	20.2	0.0	0.0081	16.1	0.0	2.1	1	1	0	1	1	1	1	KR	domain
DFP	PF04127.15	gi|297620391|ref|YP_003708528.1|	-	0.0025	17.7	0.0	0.024	14.5	0.0	2.0	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
NAD_binding_10	PF13460.6	gi|297620391|ref|YP_003708528.1|	-	0.0071	16.3	0.0	0.014	15.3	0.0	1.5	1	1	0	1	1	1	1	NAD(P)H-binding
GDP_Man_Dehyd	PF16363.5	gi|297620391|ref|YP_003708528.1|	-	0.15	11.4	0.0	0.4	10.0	0.0	1.7	2	0	0	2	2	2	0	GDP-mannose	4,6	dehydratase
DUF1776	PF08643.10	gi|297620391|ref|YP_003708528.1|	-	0.16	11.3	0.0	0.23	10.8	0.0	1.2	1	0	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
DUF1848	PF08902.11	gi|297620392|ref|YP_003708529.1|	-	0.0016	18.2	0.1	0.0016	18.2	0.1	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1848)
Radical_SAM	PF04055.21	gi|297620392|ref|YP_003708529.1|	-	0.037	14.4	0.4	0.15	12.5	0.4	2.0	1	1	0	1	1	1	0	Radical	SAM	superfamily
PNP_UDP_1	PF01048.20	gi|297620393|ref|YP_003708530.1|	-	0.00027	20.3	0.0	0.36	10.0	0.0	2.1	1	1	1	2	2	2	2	Phosphorylase	superfamily
DUF72	PF01904.18	gi|297620394|ref|YP_003708531.1|	-	2.9e-53	181.2	0.0	3.3e-53	181.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
Peptidase_M29	PF02073.15	gi|297620395|ref|YP_003708532.1|	-	2.6e-96	322.9	0.0	2.9e-96	322.7	0.0	1.0	1	0	0	1	1	1	1	Thermophilic	metalloprotease	(M29)
PrmA	PF06325.13	gi|297620396|ref|YP_003708533.1|	-	4.3e-44	151.1	0.0	4.9e-44	150.9	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.6	gi|297620396|ref|YP_003708533.1|	-	6.1e-10	39.7	0.0	9.9e-10	39.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|297620396|ref|YP_003708533.1|	-	1.1e-08	35.1	0.0	1.5e-08	34.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297620396|ref|YP_003708533.1|	-	4.9e-08	33.0	0.0	7.5e-08	32.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|297620396|ref|YP_003708533.1|	-	5.1e-07	29.4	0.0	7.7e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
PCMT	PF01135.19	gi|297620396|ref|YP_003708533.1|	-	7.6e-07	29.1	0.0	1e-06	28.7	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_11	PF08241.12	gi|297620396|ref|YP_003708533.1|	-	2.4e-06	28.1	0.0	4.4e-06	27.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297620396|ref|YP_003708533.1|	-	6.6e-05	23.6	0.0	0.0001	22.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
ADH_zinc_N	PF00107.26	gi|297620396|ref|YP_003708533.1|	-	0.00067	19.6	0.0	0.0011	19.0	0.0	1.2	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
CMAS	PF02353.20	gi|297620396|ref|YP_003708533.1|	-	0.013	14.8	0.0	0.018	14.3	0.0	1.3	1	1	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_32	PF13679.6	gi|297620396|ref|YP_003708533.1|	-	0.041	13.9	0.0	0.054	13.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_10	PF05971.12	gi|297620396|ref|YP_003708533.1|	-	0.094	12.0	0.0	0.14	11.5	0.0	1.2	1	0	0	1	1	1	0	RNA	methyltransferase
Methyltransf_18	PF12847.7	gi|297620396|ref|YP_003708533.1|	-	0.095	12.6	0.0	0.19	11.6	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
TehB	PF03848.14	gi|297620396|ref|YP_003708533.1|	-	0.11	11.9	0.0	0.15	11.4	0.0	1.2	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
MetW	PF07021.12	gi|297620396|ref|YP_003708533.1|	-	0.13	11.9	0.0	0.19	11.3	0.0	1.2	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Pro_CA	PF00484.19	gi|297620397|ref|YP_003708534.1|	-	2.2e-38	132.0	0.1	3.6e-38	131.3	0.1	1.3	1	0	0	1	1	1	1	Carbonic	anhydrase
TrbH	PF07283.11	gi|297620397|ref|YP_003708534.1|	-	0.023	14.8	0.0	0.036	14.3	0.0	1.3	1	0	0	1	1	1	0	Conjugal	transfer	protein	TrbH
Elf4	PF07011.11	gi|297620397|ref|YP_003708534.1|	-	0.042	13.8	0.2	0.082	12.8	0.2	1.5	1	0	0	1	1	1	0	Early	Flowering	4	domain
NUFIP2	PF15293.6	gi|297620397|ref|YP_003708534.1|	-	0.12	11.3	0.0	0.13	11.1	0.0	1.2	1	0	0	1	1	1	0	Nuclear	fragile	X	mental	retardation-interacting	protein	2
Sulfate_transp	PF00916.20	gi|297620398|ref|YP_003708535.1|	-	2.6e-61	207.5	19.4	3.4e-61	207.1	19.4	1.1	1	0	0	1	1	1	1	Sulfate	permease	family
MFS_MOT1	PF16983.5	gi|297620398|ref|YP_003708535.1|	-	3.3e-05	24.2	1.0	3.3e-05	24.2	1.0	3.8	3	1	1	4	4	4	2	Molybdate	transporter	of	MFS	superfamily
OMP_b-brl	PF13505.6	gi|297620399|ref|YP_003708536.1|	-	1.6e-15	57.7	0.1	1.9e-15	57.5	0.1	1.0	1	0	0	1	1	1	1	Outer	membrane	protein	beta-barrel	domain
TrmB	PF01978.19	gi|297620400|ref|YP_003708537.1|	-	0.00034	20.5	0.1	0.00068	19.5	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.6	gi|297620400|ref|YP_003708537.1|	-	0.007	15.9	0.0	0.013	15.0	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.21	gi|297620400|ref|YP_003708537.1|	-	0.037	13.7	0.1	0.14	11.8	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
LexA_DNA_bind	PF01726.16	gi|297620400|ref|YP_003708537.1|	-	0.099	12.4	0.0	0.2	11.4	0.0	1.5	1	0	0	1	1	1	0	LexA	DNA	binding	domain
TBPIP	PF07106.13	gi|297620400|ref|YP_003708537.1|	-	0.12	12.3	0.2	0.32	11.0	0.1	1.9	2	0	0	2	2	2	0	TBPIP/Hop2	winged	helix	domain
BioY	PF02632.14	gi|297620401|ref|YP_003708538.1|	-	1.5e-17	63.9	15.1	1.5e-17	63.9	15.1	2.2	2	1	0	2	2	2	1	BioY	family
BPL_N	PF09825.9	gi|297620402|ref|YP_003708539.1|	-	1.4e-14	54.0	0.0	1.8e-14	53.6	0.0	1.1	1	0	0	1	1	1	1	Biotin-protein	ligase,	N	terminal
MgsA_C	PF12002.8	gi|297620403|ref|YP_003708540.1|	-	1.1e-67	227.1	0.0	1.5e-67	226.7	0.0	1.2	1	0	0	1	1	1	1	MgsA	AAA+	ATPase	C	terminal
AAA_assoc_2	PF16193.5	gi|297620403|ref|YP_003708540.1|	-	5.9e-19	68.2	0.0	1.3e-18	67.0	0.0	1.6	1	0	0	1	1	1	1	AAA	C-terminal	domain
AAA	PF00004.29	gi|297620403|ref|YP_003708540.1|	-	7.4e-14	52.3	0.0	1.3e-13	51.5	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|297620403|ref|YP_003708540.1|	-	1.4e-13	50.9	0.0	2.2e-13	50.2	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_5	PF07728.14	gi|297620403|ref|YP_003708540.1|	-	5.1e-07	29.8	0.0	8.6e-06	25.8	0.0	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|297620403|ref|YP_003708540.1|	-	8.3e-06	26.3	0.2	0.00059	20.3	0.2	2.8	1	1	0	1	1	1	1	AAA	ATPase	domain
Sigma54_activat	PF00158.26	gi|297620403|ref|YP_003708540.1|	-	1.3e-05	24.9	0.0	0.0064	16.2	0.0	2.3	1	1	1	2	2	2	2	Sigma-54	interaction	domain
AAA_22	PF13401.6	gi|297620403|ref|YP_003708540.1|	-	8.6e-05	22.8	0.0	0.027	14.7	0.0	3.0	2	1	1	3	3	3	1	AAA	domain
Mg_chelatase	PF01078.21	gi|297620403|ref|YP_003708540.1|	-	0.00016	21.1	0.1	0.37	10.1	0.0	2.3	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
DUF815	PF05673.13	gi|297620403|ref|YP_003708540.1|	-	0.00025	20.3	0.0	0.0016	17.6	0.0	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_3	PF07726.11	gi|297620403|ref|YP_003708540.1|	-	0.00042	20.2	0.0	0.0028	17.5	0.0	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activ_2	PF14532.6	gi|297620403|ref|YP_003708540.1|	-	0.001	19.2	0.0	0.0021	18.2	0.0	1.5	1	0	0	1	1	1	1	Sigma-54	interaction	domain
DNA_pol3_delta2	PF13177.6	gi|297620403|ref|YP_003708540.1|	-	0.0014	18.4	0.0	0.016	15.0	0.0	2.1	1	1	1	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_14	PF13173.6	gi|297620403|ref|YP_003708540.1|	-	0.0026	17.8	0.0	0.005	16.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|297620403|ref|YP_003708540.1|	-	0.005	16.1	0.0	0.012	14.9	0.0	1.6	1	0	0	1	1	1	1	Zeta	toxin
ResIII	PF04851.15	gi|297620403|ref|YP_003708540.1|	-	0.0071	16.4	0.0	0.78	9.7	0.0	2.5	2	1	1	3	3	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.6	gi|297620403|ref|YP_003708540.1|	-	0.011	16.1	0.0	3.3	8.0	0.0	2.3	1	1	1	2	2	2	0	AAA	domain
DNA_pol3_delta	PF06144.13	gi|297620403|ref|YP_003708540.1|	-	0.014	15.2	0.4	0.068	13.0	0.2	2.1	1	1	1	2	2	2	0	DNA	polymerase	III,	delta	subunit
AAA_2	PF07724.14	gi|297620403|ref|YP_003708540.1|	-	0.025	14.7	0.0	0.065	13.3	0.0	1.7	2	0	0	2	2	1	0	AAA	domain	(Cdc48	subfamily)
AAA_24	PF13479.6	gi|297620403|ref|YP_003708540.1|	-	0.034	13.9	0.0	0.051	13.3	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|297620403|ref|YP_003708540.1|	-	0.04	13.6	0.0	1.8	8.2	0.0	2.2	1	1	0	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|297620403|ref|YP_003708540.1|	-	0.052	13.1	0.0	0.32	10.5	0.0	2.1	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
TniB	PF05621.11	gi|297620403|ref|YP_003708540.1|	-	0.076	12.4	0.0	0.89	8.9	0.0	2.2	1	1	1	2	2	2	0	Bacterial	TniB	protein
SKI	PF01202.22	gi|297620403|ref|YP_003708540.1|	-	0.1	12.7	0.0	0.24	11.5	0.0	1.6	1	0	0	1	1	1	0	Shikimate	kinase
AAA_18	PF13238.6	gi|297620403|ref|YP_003708540.1|	-	0.1	13.1	0.0	0.21	12.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|297620403|ref|YP_003708540.1|	-	0.11	12.9	0.0	0.21	12.0	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
Viral_helicase1	PF01443.18	gi|297620403|ref|YP_003708540.1|	-	0.16	11.6	0.0	0.24	11.1	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
FA_desaturase	PF00487.24	gi|297620405|ref|YP_003708542.1|	-	8.5e-31	107.7	19.4	8.5e-31	107.7	19.4	1.4	1	1	0	1	1	1	1	Fatty	acid	desaturase
UPF0004	PF00919.20	gi|297620406|ref|YP_003708543.1|	-	1.2e-24	86.2	0.0	2.5e-24	85.2	0.0	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
Radical_SAM	PF04055.21	gi|297620406|ref|YP_003708543.1|	-	5e-21	75.8	0.3	4.1e-20	72.8	0.0	2.5	3	0	0	3	3	3	1	Radical	SAM	superfamily
TRAM_2	PF18693.1	gi|297620406|ref|YP_003708543.1|	-	3e-17	62.5	1.9	5.2e-17	61.8	1.2	1.8	2	0	0	2	2	2	1	TRAM	domain
GcpE	PF04551.14	gi|297620406|ref|YP_003708543.1|	-	0.015	14.4	0.0	0.022	13.9	0.0	1.2	1	0	0	1	1	1	0	GcpE	protein
TTRAP	PF14203.6	gi|297620406|ref|YP_003708543.1|	-	0.22	11.5	0.7	22	5.1	0.0	3.3	3	0	0	3	3	3	0	Putative	tranposon-transfer	assisting	protein
GtrA	PF04138.14	gi|297620407|ref|YP_003708544.1|	-	5.8e-18	65.2	15.6	1.6e-17	63.8	16.0	1.5	1	1	0	1	1	1	1	GtrA-like	protein
Methyltransf_23	PF13489.6	gi|297620408|ref|YP_003708545.1|	-	7.5e-06	25.9	0.0	9.2e-06	25.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297620408|ref|YP_003708545.1|	-	0.00067	20.3	0.0	0.014	16.1	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297620408|ref|YP_003708545.1|	-	0.001	19.7	0.0	0.012	16.3	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297620408|ref|YP_003708545.1|	-	0.0032	18.2	0.0	0.01	16.6	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Coa1	PF08695.10	gi|297620409|ref|YP_003708546.1|	-	0.077	12.7	0.0	0.22	11.3	0.0	1.7	2	0	0	2	2	2	0	Cytochrome	oxidase	complex	assembly	protein	1
CBM_4_9	PF02018.17	gi|297620409|ref|YP_003708546.1|	-	0.097	12.9	0.2	0.46	10.8	0.0	2.2	3	0	0	3	3	3	0	Carbohydrate	binding	domain
SSF	PF00474.17	gi|297620410|ref|YP_003708547.1|	-	5.1e-76	256.1	27.4	6e-76	255.9	27.4	1.0	1	0	0	1	1	1	1	Sodium:solute	symporter	family
Hexapep	PF00132.24	gi|297620411|ref|YP_003708548.1|	-	6.4e-18	63.7	9.3	1.6e-05	24.4	0.2	4.2	2	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|297620411|ref|YP_003708548.1|	-	3.8e-08	33.0	14.4	0.013	15.3	0.5	4.9	4	1	1	5	5	5	3	Hexapeptide	repeat	of	succinyl-transferase
TPR_19	PF14559.6	gi|297620412|ref|YP_003708549.1|	-	1.2e-08	35.4	21.9	0.029	14.9	0.5	6.8	6	1	1	7	7	7	4	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297620412|ref|YP_003708549.1|	-	1.5e-05	25.1	9.3	0.9	9.8	0.1	5.4	5	0	0	5	5	5	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.6	gi|297620412|ref|YP_003708549.1|	-	0.00069	20.2	12.9	1.2	10.1	0.1	6.5	4	1	2	6	6	6	2	Tetratricopeptide	repeat
TPR_20	PF14561.6	gi|297620412|ref|YP_003708549.1|	-	0.0026	18.1	10.3	0.13	12.6	0.3	4.6	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297620412|ref|YP_003708549.1|	-	0.0052	16.8	14.6	0.65	10.2	0.2	5.9	6	0	0	6	6	6	2	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|297620412|ref|YP_003708549.1|	-	0.016	15.6	4.1	3.1	8.4	0.0	4.5	3	1	1	4	4	4	0	Tetratricopeptide	repeat
PknG_TPR	PF16918.5	gi|297620412|ref|YP_003708549.1|	-	0.051	12.3	0.1	0.085	11.6	0.1	1.3	1	0	0	1	1	1	0	Protein	kinase	G	tetratricopeptide	repeat
TPR_16	PF13432.6	gi|297620412|ref|YP_003708549.1|	-	0.92	10.2	13.8	4.5	8.0	0.1	5.7	6	1	0	6	6	6	0	Tetratricopeptide	repeat
Macro	PF01661.21	gi|297620413|ref|YP_003708550.1|	-	3.1e-30	104.7	0.1	5.1e-30	103.9	0.1	1.4	1	0	0	1	1	1	1	Macro	domain
GTP_EFTU	PF00009.27	gi|297620414|ref|YP_003708551.1|	-	1.8e-53	181.0	0.0	3.9e-53	179.9	0.0	1.5	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
EFG_C	PF00679.24	gi|297620414|ref|YP_003708551.1|	-	1.1e-20	73.4	0.0	3.4e-20	71.9	0.0	1.9	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.25	gi|297620414|ref|YP_003708551.1|	-	3.2e-12	46.7	1.4	9.4e-12	45.2	1.4	1.9	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|297620414|ref|YP_003708551.1|	-	0.00014	21.9	0.0	0.00031	20.8	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
EFG_II	PF14492.6	gi|297620414|ref|YP_003708551.1|	-	0.0054	16.8	0.0	0.011	15.8	0.0	1.4	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
Septin	PF00735.18	gi|297620414|ref|YP_003708551.1|	-	0.0067	15.7	0.0	0.011	15.0	0.0	1.3	1	0	0	1	1	1	1	Septin
FeoB_N	PF02421.18	gi|297620414|ref|YP_003708551.1|	-	0.059	12.9	0.0	0.46	10.0	0.0	2.3	2	1	0	2	2	2	0	Ferrous	iron	transport	protein	B
Beta-Casp	PF10996.8	gi|297620415|ref|YP_003708552.1|	-	2.8e-25	88.8	0.0	5.6e-25	87.8	0.0	1.5	1	0	0	1	1	1	1	Beta-Casp	domain
RMMBL	PF07521.12	gi|297620415|ref|YP_003708552.1|	-	4.7e-17	61.7	0.1	1.8e-16	59.8	0.0	2.1	3	0	0	3	3	3	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B_6	PF16661.5	gi|297620415|ref|YP_003708552.1|	-	9.7e-12	44.7	0.0	1.3e-10	41.1	0.0	2.5	3	0	0	3	3	3	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|297620415|ref|YP_003708552.1|	-	8.6e-11	42.2	0.2	3.2e-10	40.3	0.2	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|297620415|ref|YP_003708552.1|	-	4.8e-07	29.5	0.0	2.2e-06	27.3	0.0	2.0	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Tex_N	PF09371.10	gi|297620416|ref|YP_003708553.1|	-	6.1e-70	234.6	2.9	6.1e-70	234.6	2.9	1.9	2	0	0	2	2	2	1	Tex-like	protein	N-terminal	domain
Tex_YqgF	PF16921.5	gi|297620416|ref|YP_003708553.1|	-	1.3e-45	154.9	0.0	2.9e-45	153.8	0.0	1.6	1	0	0	1	1	1	1	Tex	protein	YqgF-like	domain
HHH_3	PF12836.7	gi|297620416|ref|YP_003708553.1|	-	2.6e-26	91.7	0.0	7.2e-26	90.2	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_9	PF17674.1	gi|297620416|ref|YP_003708553.1|	-	5.3e-23	81.7	0.2	2.4e-22	79.6	0.0	2.3	2	0	0	2	2	2	1	HHH	domain
S1	PF00575.23	gi|297620416|ref|YP_003708553.1|	-	2.7e-21	75.7	0.8	5.8e-21	74.6	0.8	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
YqgF	PF14639.6	gi|297620416|ref|YP_003708553.1|	-	6.7e-10	38.9	0.0	1.8e-09	37.6	0.0	1.8	1	0	0	1	1	1	1	Holliday-junction	resolvase-like	of	SPT6
HHH_7	PF14635.6	gi|297620416|ref|YP_003708553.1|	-	1.4e-07	31.8	0.0	3.8e-07	30.4	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HTH_41	PF14502.6	gi|297620416|ref|YP_003708553.1|	-	0.004	16.8	0.0	0.019	14.7	0.0	2.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
T2SSK	PF03934.13	gi|297620416|ref|YP_003708553.1|	-	0.017	14.6	0.2	0.042	13.2	0.0	1.7	2	0	0	2	2	2	0	Type	II	secretion	system	(T2SS),	protein	K
HHH_6	PF14579.6	gi|297620416|ref|YP_003708553.1|	-	0.035	14.4	0.0	0.21	11.9	0.0	2.3	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
DUF460	PF04312.13	gi|297620416|ref|YP_003708553.1|	-	0.1	12.3	0.0	1	9.1	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF460)
BAR	PF03114.18	gi|297620416|ref|YP_003708553.1|	-	0.11	12.2	4.9	0.57	9.8	0.1	2.6	2	0	0	2	2	2	0	BAR	domain
HTH_24	PF13412.6	gi|297620416|ref|YP_003708553.1|	-	0.86	9.2	3.5	8.9	6.0	0.1	3.5	4	0	0	4	4	4	0	Winged	helix-turn-helix	DNA-binding
Sigma54_DBD	PF04552.13	gi|297620417|ref|YP_003708554.1|	-	1.6e-52	177.5	0.4	9.3e-52	175.0	0.2	2.2	2	0	0	2	2	2	1	Sigma-54,	DNA	binding	domain
Sigma54_CBD	PF04963.13	gi|297620417|ref|YP_003708554.1|	-	3.5e-43	147.5	1.1	3.5e-43	147.5	1.1	2.2	2	0	0	2	2	2	1	Sigma-54	factor,	core	binding	domain
Sigma54_AID	PF00309.20	gi|297620417|ref|YP_003708554.1|	-	7.2e-10	38.6	13.1	2e-09	37.1	13.1	1.8	1	0	0	1	1	1	1	Sigma-54	factor,	Activator	interacting	domain	(AID)
HTH_23	PF13384.6	gi|297620417|ref|YP_003708554.1|	-	0.00019	21.2	1.2	0.0076	16.0	0.0	3.5	4	0	0	4	4	4	1	Homeodomain-like	domain
HTH_AraC	PF00165.23	gi|297620417|ref|YP_003708554.1|	-	0.0016	18.5	0.0	0.086	13.0	0.0	2.7	2	0	0	2	2	2	1	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
HTH_17	PF12728.7	gi|297620417|ref|YP_003708554.1|	-	0.003	17.7	0.3	0.017	15.3	0.0	2.5	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|297620417|ref|YP_003708554.1|	-	0.0095	15.9	0.0	0.15	12.0	0.0	2.9	3	0	0	3	3	3	1	Crp-like	helix-turn-helix	domain
HTH_38	PF13936.6	gi|297620417|ref|YP_003708554.1|	-	0.011	15.5	0.0	0.035	13.9	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.6	gi|297620417|ref|YP_003708554.1|	-	0.02	14.3	0.0	0.054	12.9	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
MSV199	PF10553.9	gi|297620417|ref|YP_003708554.1|	-	0.027	14.7	0.5	0.099	12.9	0.1	2.2	2	0	0	2	2	2	0	MSV199	domain
HTH_24	PF13412.6	gi|297620417|ref|YP_003708554.1|	-	0.033	13.7	0.1	4.5	6.9	0.0	3.5	4	0	0	4	4	4	0	Winged	helix-turn-helix	DNA-binding
Sigma70_r4_2	PF08281.12	gi|297620417|ref|YP_003708554.1|	-	0.079	12.6	0.1	0.63	9.8	0.0	2.5	2	0	0	2	2	2	0	Sigma-70,	region	4
MerR	PF00376.23	gi|297620417|ref|YP_003708554.1|	-	0.082	12.7	0.3	8.4	6.3	0.0	3.3	3	0	0	3	3	3	0	MerR	family	regulatory	protein
MarR_2	PF12802.7	gi|297620417|ref|YP_003708554.1|	-	0.15	12.0	0.0	0.87	9.5	0.0	2.3	2	0	0	2	2	2	0	MarR	family
RPN13_C	PF16550.5	gi|297620417|ref|YP_003708554.1|	-	0.16	12.1	4.2	0.41	10.8	1.2	2.7	2	0	0	2	2	2	0	UCH-binding	domain
GntR	PF00392.21	gi|297620417|ref|YP_003708554.1|	-	0.2	11.3	3.5	10	5.9	0.0	4.3	5	0	0	5	5	5	0	Bacterial	regulatory	proteins,	gntR	family
TFIID_20kDa	PF03847.13	gi|297620417|ref|YP_003708554.1|	-	0.22	12.0	0.0	0.22	12.0	0.0	3.1	4	0	0	4	4	3	0	Transcription	initiation	factor	TFIID	subunit	A
HTH_3	PF01381.22	gi|297620417|ref|YP_003708554.1|	-	0.55	10.3	3.2	0.68	10.0	0.0	2.8	3	0	0	3	3	3	0	Helix-turn-helix
RHS_repeat	PF05593.14	gi|297620418|ref|YP_003708555.1|	-	9e-41	137.8	72.9	7.7e-06	26.3	0.0	23.1	19	5	3	23	23	23	16	RHS	Repeat
MORN_2	PF07661.13	gi|297620418|ref|YP_003708555.1|	-	3.7	8.1	8.6	44	4.8	0.3	6.0	6	1	1	7	7	7	0	MORN	repeat	variant
TENA_THI-4	PF03070.16	gi|297620420|ref|YP_003708557.1|	-	0.063	13.1	0.0	0.23	11.2	0.0	1.8	2	0	0	2	2	2	0	TENA/THI-4/PQQC	family
RHS_repeat	PF05593.14	gi|297620422|ref|YP_003708559.1|	-	5.4e-08	33.2	1.6	5.9e-05	23.5	0.2	2.2	2	0	0	2	2	2	2	RHS	Repeat
HTH_Tnp_1	PF01527.20	gi|297620426|ref|YP_003708563.1|	-	9.5e-12	45.1	0.5	1.2e-11	44.7	0.5	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.6	gi|297620426|ref|YP_003708563.1|	-	8.9e-05	22.5	0.0	0.00014	21.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|297620426|ref|YP_003708563.1|	-	0.00023	20.9	0.0	0.00038	20.2	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
rve	PF00665.26	gi|297620427|ref|YP_003708564.1|	-	4.4e-21	75.3	0.0	6.4e-21	74.7	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297620427|ref|YP_003708564.1|	-	3.9e-15	55.7	0.8	8.4e-15	54.7	0.8	1.6	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.6	gi|297620427|ref|YP_003708564.1|	-	1.9e-12	46.8	0.2	3.7e-12	45.8	0.2	1.5	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297620427|ref|YP_003708564.1|	-	0.0011	19.5	0.4	0.0011	19.5	0.4	2.4	3	0	0	3	3	3	1	Homeodomain-like	domain
rve_2	PF13333.6	gi|297620427|ref|YP_003708564.1|	-	0.01	16.0	1.0	0.021	15.0	1.0	1.5	1	0	0	1	1	1	0	Integrase	core	domain
PsiA	PF06952.11	gi|297620427|ref|YP_003708564.1|	-	0.029	13.6	3.5	0.75	9.0	0.0	2.3	2	1	0	2	2	2	0	PsiA	protein
Trypsin_2	PF13365.6	gi|297620428|ref|YP_003708565.1|	-	8.9e-27	94.8	0.0	1.2e-26	94.4	0.0	1.2	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
Trypsin	PF00089.26	gi|297620428|ref|YP_003708565.1|	-	3.3e-12	46.7	0.4	8.6e-12	45.3	0.4	1.6	1	1	0	1	1	1	1	Trypsin
Peptidase_S7	PF00949.21	gi|297620428|ref|YP_003708565.1|	-	1.3e-06	28.2	0.2	4.3e-06	26.6	0.1	1.8	2	0	0	2	2	2	1	Peptidase	S7,	Flavivirus	NS3	serine	protease
Peptidase_S29	PF02907.15	gi|297620428|ref|YP_003708565.1|	-	0.00086	19.1	0.0	0.0017	18.1	0.0	1.5	1	0	0	1	1	1	1	Hepatitis	C	virus	NS3	protease
Peptidase_S46	PF10459.9	gi|297620428|ref|YP_003708565.1|	-	0.024	13.3	0.3	0.98	8.0	0.2	2.1	2	0	0	2	2	2	0	Peptidase	S46
Peptidase_S32	PF05579.13	gi|297620428|ref|YP_003708565.1|	-	0.062	12.5	0.2	5.7	6.0	0.0	2.1	2	0	0	2	2	2	0	Equine	arteritis	virus	serine	endopeptidase	S32
DUF31	PF01732.16	gi|297620428|ref|YP_003708565.1|	-	0.12	11.9	0.8	0.2	11.2	0.8	1.7	1	1	0	1	1	1	0	Putative	peptidase	(DUF31)
PEGA	PF08308.11	gi|297620430|ref|YP_003708567.1|	-	1.2e-08	34.7	0.0	1.8e-08	34.1	0.0	1.2	1	0	0	1	1	1	1	PEGA	domain
DUF1455	PF07306.11	gi|297620430|ref|YP_003708567.1|	-	0.078	12.9	0.0	0.14	12.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1455)
DUF4157	PF13699.6	gi|297620431|ref|YP_003708568.1|	-	0.11	12.7	0.0	0.2	11.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4157)
Gemini_mov	PF01708.16	gi|297620431|ref|YP_003708568.1|	-	0.12	12.1	0.2	0.31	10.8	0.2	1.7	1	0	0	1	1	1	0	Geminivirus	putative	movement	protein
Thy1	PF02511.15	gi|297620432|ref|YP_003708569.1|	-	2.9e-42	144.6	0.0	1.5e-29	103.2	0.7	2.4	2	0	0	2	2	2	2	Thymidylate	synthase	complementing	protein
Trp_Tyr_perm	PF03222.13	gi|297620433|ref|YP_003708570.1|	-	1e-104	350.8	30.1	1.2e-104	350.5	30.1	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Aa_trans	PF01490.18	gi|297620433|ref|YP_003708570.1|	-	9.6e-06	24.6	18.0	9.6e-06	24.6	18.0	2.3	2	1	0	2	2	2	1	Transmembrane	amino	acid	transporter	protein
Trp_Tyr_perm	PF03222.13	gi|297620434|ref|YP_003708571.1|	-	6.8e-101	338.1	34.3	7.8e-101	338.0	34.3	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Aa_trans	PF01490.18	gi|297620434|ref|YP_003708571.1|	-	1.6e-05	23.9	19.0	1.6e-05	23.9	19.0	2.7	2	2	0	2	2	2	1	Transmembrane	amino	acid	transporter	protein
IlvB_leader	PF08049.11	gi|297620434|ref|YP_003708571.1|	-	0.25	11.3	4.5	0.17	11.8	1.2	2.3	2	0	0	2	2	2	0	IlvB	leader	peptide
tRNA-synt_1b	PF00579.25	gi|297620435|ref|YP_003708572.1|	-	3.9e-73	246.3	0.0	4.9e-73	246.0	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
UvrB_inter	PF17757.1	gi|297620436|ref|YP_003708573.1|	-	4e-32	110.2	0.1	1.4e-31	108.5	0.1	2.0	1	0	0	1	1	1	1	UvrB	interaction	domain
UvrB	PF12344.8	gi|297620436|ref|YP_003708573.1|	-	5.3e-18	64.6	1.3	1.6e-17	63.0	0.3	2.4	2	0	0	2	2	2	1	Ultra-violet	resistance	protein	B
Helicase_C	PF00271.31	gi|297620436|ref|YP_003708573.1|	-	6.1e-17	62.0	0.3	2.4e-16	60.1	0.1	2.2	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|297620436|ref|YP_003708573.1|	-	2.3e-14	53.7	0.1	3.1e-12	46.8	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
UVR	PF02151.19	gi|297620436|ref|YP_003708573.1|	-	2.2e-08	33.6	5.4	7.4e-08	31.9	5.4	2.0	1	0	0	1	1	1	1	UvrB/uvrC	motif
AAA_30	PF13604.6	gi|297620436|ref|YP_003708573.1|	-	1.8e-05	24.5	0.0	0.00078	19.2	0.0	3.1	4	0	0	4	4	4	1	AAA	domain
DEAD	PF00270.29	gi|297620436|ref|YP_003708573.1|	-	0.00011	22.0	0.1	0.002	17.9	0.0	2.8	3	1	0	3	3	3	1	DEAD/DEAH	box	helicase
SWI2_SNF2	PF18766.1	gi|297620436|ref|YP_003708573.1|	-	0.0004	20.1	0.0	0.0027	17.4	0.0	2.1	2	0	0	2	2	2	1	SWI2/SNF2	ATPase
AAA_19	PF13245.6	gi|297620436|ref|YP_003708573.1|	-	0.0018	18.6	0.0	3.5	7.9	0.0	3.2	3	0	0	3	3	3	2	AAA	domain
A2M_recep	PF07677.14	gi|297620436|ref|YP_003708573.1|	-	0.027	15.2	0.6	9.1	7.1	0.0	2.8	2	0	0	2	2	2	0	A-macroglobulin	receptor	binding	domain
AAA_22	PF13401.6	gi|297620436|ref|YP_003708573.1|	-	0.031	14.6	0.0	0.15	12.3	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
Microtub_bd	PF16796.5	gi|297620436|ref|YP_003708573.1|	-	0.031	14.2	0.2	0.096	12.6	0.0	1.9	2	0	0	2	2	2	0	Microtubule	binding
Kinesin	PF00225.23	gi|297620436|ref|YP_003708573.1|	-	0.044	12.7	0.0	0.073	12.0	0.0	1.3	1	0	0	1	1	1	0	Kinesin	motor	domain
UvrD-helicase	PF00580.21	gi|297620436|ref|YP_003708573.1|	-	0.22	11.0	2.2	9.7	5.6	0.3	2.4	2	0	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
Pfg27	PF09216.10	gi|297620437|ref|YP_003708574.1|	-	0.013	15.4	0.8	0.023	14.5	0.8	1.6	1	0	0	1	1	1	0	Pfg27
DNA_pol_B_palm	PF14792.6	gi|297620437|ref|YP_003708574.1|	-	0.046	13.9	0.0	0.15	12.2	0.0	1.9	1	0	0	1	1	1	0	DNA	polymerase	beta	palm
Penicillinase_R	PF03965.16	gi|297620437|ref|YP_003708574.1|	-	0.071	13.5	0.3	0.16	12.3	0.3	1.7	1	0	0	1	1	1	0	Penicillinase	repressor
DUF2433	PF10360.9	gi|297620437|ref|YP_003708574.1|	-	0.13	12.4	1.2	2.9	8.0	1.2	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2433)
DUF1002	PF06207.11	gi|297620437|ref|YP_003708574.1|	-	0.23	11.0	2.3	0.37	10.3	2.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1002)
H-kinase_dim	PF02895.14	gi|297620437|ref|YP_003708574.1|	-	0.24	11.8	1.3	5.3	7.5	0.4	2.5	2	0	0	2	2	2	0	Signal	transducing	histidine	kinase,	homodimeric	domain
Tfb5	PF06331.12	gi|297620437|ref|YP_003708574.1|	-	1.9	8.5	7.3	15	5.7	0.1	3.5	3	0	0	3	3	3	0	Transcription	factor	TFIIH	complex	subunit	Tfb5
Ank_5	PF13857.6	gi|297620438|ref|YP_003708575.1|	-	1.2e-19	70.1	4.3	4.1e-11	42.9	0.1	4.0	2	1	2	4	4	4	3	Ankyrin	repeats	(many	copies)
Ank_4	PF13637.6	gi|297620438|ref|YP_003708575.1|	-	7.9e-19	67.8	2.0	5e-08	33.3	0.1	4.3	3	1	1	4	4	4	3	Ankyrin	repeats	(many	copies)
Ank_2	PF12796.7	gi|297620438|ref|YP_003708575.1|	-	1.3e-17	64.2	0.3	3.2e-07	30.9	0.0	2.7	2	0	0	2	2	2	2	Ankyrin	repeats	(3	copies)
Ank	PF00023.30	gi|297620438|ref|YP_003708575.1|	-	2.7e-14	52.8	1.9	5.7e-05	23.4	0.1	4.0	3	0	0	3	3	3	2	Ankyrin	repeat
Ank_3	PF13606.6	gi|297620438|ref|YP_003708575.1|	-	8.9e-12	44.1	2.6	7.4e-05	22.9	0.1	5.5	4	1	0	4	4	4	3	Ankyrin	repeat
Halogen_Hydrol	PF10112.9	gi|297620438|ref|YP_003708575.1|	-	0.041	13.9	0.0	0.071	13.1	0.0	1.3	1	0	0	1	1	1	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
HD	PF01966.22	gi|297620438|ref|YP_003708575.1|	-	0.11	12.7	0.0	0.27	11.5	0.0	1.7	1	0	0	1	1	1	0	HD	domain
Fer4_NifH	PF00142.18	gi|297620438|ref|YP_003708575.1|	-	0.13	11.7	0.0	0.2	11.1	0.0	1.3	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
Pkinase	PF00069.25	gi|297620439|ref|YP_003708576.1|	-	4.2e-08	32.9	2.8	4.2e-08	32.9	2.8	3.1	3	1	0	3	3	3	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|297620439|ref|YP_003708576.1|	-	5.5e-06	25.8	0.3	8.9e-06	25.2	0.3	1.4	1	0	0	1	1	1	1	Protein	tyrosine	kinase
L31	PF09784.9	gi|297620439|ref|YP_003708576.1|	-	0.093	13.2	7.4	0.46	10.9	0.1	2.9	3	0	0	3	3	3	0	Mitochondrial	ribosomal	protein	L31
D5_N	PF08706.11	gi|297620439|ref|YP_003708576.1|	-	3	8.1	6.0	8.2	6.7	0.3	2.4	2	0	0	2	2	2	0	D5	N	terminal	like
RAMPs	PF03787.15	gi|297620439|ref|YP_003708576.1|	-	3.8	7.5	6.5	0.63	10.0	1.3	2.1	1	1	0	2	2	2	0	RAMP	superfamily
SpoU_methylase	PF00588.19	gi|297620440|ref|YP_003708577.1|	-	1.3e-23	83.7	0.0	1.7e-23	83.3	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
4HBT	PF03061.22	gi|297620441|ref|YP_003708578.1|	-	2.8e-15	56.4	0.1	3.8e-15	56.0	0.1	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
DUF4442	PF14539.6	gi|297620441|ref|YP_003708578.1|	-	0.00046	20.3	0.0	0.00076	19.6	0.0	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4442)
zf-RING_7	PF02591.15	gi|297620442|ref|YP_003708579.1|	-	0.0057	16.8	0.6	0.54	10.5	0.1	2.2	2	0	0	2	2	2	1	C4-type	zinc	ribbon	domain
HypA	PF01155.19	gi|297620442|ref|YP_003708579.1|	-	0.015	15.3	0.1	0.015	15.3	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
PhnA_Zn_Ribbon	PF08274.12	gi|297620442|ref|YP_003708579.1|	-	0.018	15.0	1.8	1.4	8.9	0.1	2.3	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Saf_2TM	PF18303.1	gi|297620442|ref|YP_003708579.1|	-	0.064	12.8	0.2	0.073	12.7	0.2	1.1	1	0	0	1	1	1	0	SAVED-fused	2TM	effector	domain
DUF981	PF06168.11	gi|297620442|ref|YP_003708579.1|	-	0.072	13.0	0.2	0.082	12.8	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF981)
zf-IS66	PF13005.7	gi|297620442|ref|YP_003708579.1|	-	0.076	13.4	1.5	7.9	7.0	0.0	2.4	1	1	1	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Zn-ribbon_8	PF09723.10	gi|297620442|ref|YP_003708579.1|	-	0.076	13.1	1.7	0.24	11.5	1.9	1.6	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|297620442|ref|YP_003708579.1|	-	0.15	11.5	0.5	0.15	11.5	0.5	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|297620442|ref|YP_003708579.1|	-	0.21	11.4	3.5	0.52	10.1	0.3	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
ExbD	PF02472.16	gi|297620444|ref|YP_003708581.1|	-	4.7e-22	78.6	0.3	5.5e-22	78.3	0.3	1.0	1	0	0	1	1	1	1	Biopolymer	transport	protein	ExbD/TolR
Cas_Cas02710	PF09670.10	gi|297620444|ref|YP_003708581.1|	-	0.12	11.2	0.0	0.14	10.9	0.0	1.0	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cas02710)
MotA_ExbB	PF01618.16	gi|297620445|ref|YP_003708582.1|	-	1e-30	106.1	3.7	1.3e-30	105.7	3.7	1.2	1	0	0	1	1	1	1	MotA/TolQ/ExbB	proton	channel	family
Erf4	PF10256.9	gi|297620445|ref|YP_003708582.1|	-	0.071	13.2	0.4	0.14	12.3	0.4	1.5	1	0	0	1	1	1	0	Golgin	subfamily	A	member	7/ERF4	family
TPR_16	PF13432.6	gi|297620446|ref|YP_003708583.1|	-	4.5e-15	56.0	31.0	0.001	19.7	0.0	9.7	7	2	2	9	9	9	5	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297620446|ref|YP_003708583.1|	-	1.1e-14	53.5	40.2	0.0022	17.7	0.0	10.7	11	0	0	11	11	10	6	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297620446|ref|YP_003708583.1|	-	2.8e-14	52.0	49.9	0.0019	18.1	0.1	12.9	13	0	0	13	13	13	6	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297620446|ref|YP_003708583.1|	-	4e-12	46.3	30.1	0.0021	18.3	0.1	8.4	8	1	1	9	9	8	4	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297620446|ref|YP_003708583.1|	-	3.4e-09	37.1	31.4	0.00056	20.4	0.3	8.2	5	3	3	8	8	8	4	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297620446|ref|YP_003708583.1|	-	8.7e-09	34.9	34.0	0.092	13.0	0.0	12.0	14	0	0	14	14	14	3	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297620446|ref|YP_003708583.1|	-	4e-08	33.4	45.7	0.045	14.4	0.3	11.5	15	0	0	15	15	10	5	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|297620446|ref|YP_003708583.1|	-	1.3e-06	28.4	15.1	0.69	10.4	0.1	8.5	9	0	0	9	9	9	2	Tetratricopeptide	repeat
TPR_21	PF09976.9	gi|297620446|ref|YP_003708583.1|	-	1.4e-06	28.2	13.3	1.5e-06	28.1	1.6	4.5	3	2	1	4	4	4	1	Tetratricopeptide	repeat-like	domain
TPR_7	PF13176.6	gi|297620446|ref|YP_003708583.1|	-	1.7e-05	24.5	15.3	0.096	12.8	0.1	8.0	9	0	0	9	9	9	1	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297620446|ref|YP_003708583.1|	-	2.3e-05	24.6	28.1	0.031	14.5	0.7	7.8	7	2	2	9	9	7	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
T6SS_VasJ	PF16989.5	gi|297620446|ref|YP_003708583.1|	-	0.0017	17.9	1.3	0.0017	17.9	1.3	2.6	2	0	0	2	2	2	1	Type	VI	secretion,	EvfE,	EvfF,	ImpA,	BimE,	VC_A0119,	VasJ
YfiO	PF13525.6	gi|297620446|ref|YP_003708583.1|	-	0.015	15.0	17.8	0.47	10.1	0.0	6.4	4	2	3	8	8	8	0	Outer	membrane	lipoprotein
HemY_N	PF07219.13	gi|297620446|ref|YP_003708583.1|	-	0.06	13.5	9.4	0.12	12.6	0.3	4.2	4	0	0	4	4	4	0	HemY	protein	N-terminus
TPR_14	PF13428.6	gi|297620446|ref|YP_003708583.1|	-	0.39	11.7	33.1	1.5	9.9	0.2	10.4	10	3	3	13	13	12	0	Tetratricopeptide	repeat
LppC	PF04348.13	gi|297620446|ref|YP_003708583.1|	-	0.45	9.2	7.2	4.9	5.8	0.3	3.5	3	0	0	3	3	3	0	LppC	putative	lipoprotein
TPR_4	PF07721.14	gi|297620446|ref|YP_003708583.1|	-	0.84	10.4	21.0	0.066	13.9	0.9	5.9	5	0	0	5	5	4	0	Tetratricopeptide	repeat
Hc1	PF07432.13	gi|297620447|ref|YP_003708584.1|	-	5.2e-44	149.5	45.2	5.2e-44	149.5	45.2	1.9	1	1	1	2	2	2	1	Histone	H1-like	protein	Hc1
HC2	PF07382.11	gi|297620447|ref|YP_003708584.1|	-	0.00054	20.1	67.9	0.00082	19.5	67.9	1.2	1	0	0	1	1	1	1	Histone	H1-like	nucleoprotein	HC2
Membralin	PF09746.9	gi|297620447|ref|YP_003708584.1|	-	0.76	8.7	5.8	0.88	8.5	5.8	1.0	1	0	0	1	1	1	0	Tumour-associated	protein
DUF2052	PF09747.9	gi|297620447|ref|YP_003708584.1|	-	1.4	9.0	7.0	1.8	8.7	7.0	1.2	1	0	0	1	1	1	0	Coiled-coil	domain	containing	protein	(DUF2052)
SOBP	PF15279.6	gi|297620447|ref|YP_003708584.1|	-	4.7	7.7	10.2	5.4	7.5	10.2	1.1	1	0	0	1	1	1	0	Sine	oculis-binding	protein
RR_TM4-6	PF06459.12	gi|297620447|ref|YP_003708584.1|	-	9.7	5.9	15.6	12	5.6	15.6	1.2	1	0	0	1	1	1	0	Ryanodine	Receptor	TM	4-6
tRNA_U5-meth_tr	PF05958.11	gi|297620448|ref|YP_003708585.1|	-	1.3e-30	106.6	0.0	3.6e-28	98.6	0.0	2.5	2	1	0	2	2	2	2	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_31	PF13847.6	gi|297620448|ref|YP_003708585.1|	-	7.8e-08	32.2	0.0	1.2e-07	31.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|297620448|ref|YP_003708585.1|	-	1.4e-07	31.3	0.0	2.3e-07	30.6	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Met_10	PF02475.16	gi|297620448|ref|YP_003708585.1|	-	2.7e-07	30.6	0.0	3.9e-07	30.0	0.0	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_15	PF09445.10	gi|297620448|ref|YP_003708585.1|	-	2.1e-06	27.4	0.0	4.6e-06	26.3	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.6	gi|297620448|ref|YP_003708585.1|	-	3.9e-06	27.5	0.0	7.3e-06	26.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|297620448|ref|YP_003708585.1|	-	5.8e-06	26.0	0.0	1.1e-05	25.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|297620448|ref|YP_003708585.1|	-	6.5e-06	25.7	0.0	1.1e-05	25.0	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
PCMT	PF01135.19	gi|297620448|ref|YP_003708585.1|	-	0.00015	21.6	0.0	0.00025	20.9	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
RrnaAD	PF00398.20	gi|297620448|ref|YP_003708585.1|	-	0.00031	19.9	0.0	0.00048	19.3	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
N6_N4_Mtase	PF01555.18	gi|297620448|ref|YP_003708585.1|	-	0.0033	17.2	0.0	0.0055	16.4	0.0	1.3	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_11	PF08241.12	gi|297620448|ref|YP_003708585.1|	-	0.004	17.8	0.0	0.0082	16.8	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.18	gi|297620448|ref|YP_003708585.1|	-	0.0068	16.1	0.0	0.019	14.6	0.0	1.8	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_4	PF02390.17	gi|297620448|ref|YP_003708585.1|	-	0.009	15.5	0.0	0.019	14.4	0.0	1.5	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_18	PF12847.7	gi|297620448|ref|YP_003708585.1|	-	0.0094	15.9	0.0	0.016	15.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297620448|ref|YP_003708585.1|	-	0.02	15.6	0.0	0.042	14.6	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297620448|ref|YP_003708585.1|	-	0.095	12.5	0.0	0.16	11.8	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_32	PF13679.6	gi|297620448|ref|YP_003708585.1|	-	0.16	12.0	0.0	0.39	10.7	0.0	1.6	2	0	0	2	2	1	0	Methyltransferase	domain
DOT1	PF08123.13	gi|297620448|ref|YP_003708585.1|	-	0.18	11.3	0.0	0.43	10.1	0.0	1.6	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
TGT	PF01702.18	gi|297620449|ref|YP_003708586.1|	-	4.2e-149	496.5	0.0	4.9e-149	496.2	0.0	1.0	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
YajC	PF02699.15	gi|297620450|ref|YP_003708587.1|	-	1.4e-18	66.5	0.5	1.9e-18	66.1	0.5	1.2	1	0	0	1	1	1	1	Preprotein	translocase	subunit
DUF4131	PF13567.6	gi|297620450|ref|YP_003708587.1|	-	0.049	13.3	0.0	0.056	13.1	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
TctB	PF07331.11	gi|297620450|ref|YP_003708587.1|	-	0.057	13.7	0.1	0.073	13.3	0.1	1.1	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
Peptidase_U32_C	PF16325.5	gi|297620450|ref|YP_003708587.1|	-	0.067	13.5	0.0	0.1	12.9	0.0	1.3	1	0	0	1	1	1	0	Peptidase	family	U32	C-terminal	domain
T2SSM	PF04612.12	gi|297620450|ref|YP_003708587.1|	-	0.082	13.0	0.0	0.13	12.3	0.0	1.2	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	M
PEP-CTERM	PF07589.11	gi|297620450|ref|YP_003708587.1|	-	0.099	12.8	0.0	0.21	11.7	0.0	1.6	1	0	0	1	1	1	0	PEP-CTERM	motif
Orf78	PF06024.12	gi|297620450|ref|YP_003708587.1|	-	0.17	12.2	0.0	0.69	10.2	0.0	1.9	2	0	0	2	2	2	0	Orf78	(ac78)
PCMT	PF01135.19	gi|297620451|ref|YP_003708588.1|	-	1.3e-61	208.0	0.0	1.5e-61	207.8	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.6	gi|297620451|ref|YP_003708588.1|	-	3.7e-06	26.8	0.0	5.7e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297620451|ref|YP_003708588.1|	-	0.00022	21.8	0.0	0.00085	19.9	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297620451|ref|YP_003708588.1|	-	0.00079	20.1	0.0	0.0017	19.0	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297620451|ref|YP_003708588.1|	-	0.0032	17.3	0.0	0.0053	16.6	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|297620451|ref|YP_003708588.1|	-	0.0048	16.0	0.0	0.0079	15.3	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
ADH_zinc_N_2	PF13602.6	gi|297620451|ref|YP_003708588.1|	-	0.11	13.5	0.0	0.2	12.7	0.0	1.4	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
Methyltransf_32	PF13679.6	gi|297620451|ref|YP_003708588.1|	-	0.13	12.2	0.0	0.21	11.6	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
K-box	PF01486.17	gi|297620452|ref|YP_003708589.1|	-	0.077	13.2	0.4	0.55	10.4	0.0	2.4	2	0	0	2	2	2	0	K-box	region
FANCI_S2	PF14676.6	gi|297620453|ref|YP_003708590.1|	-	0.079	13.3	0.3	0.65	10.3	0.0	2.3	1	1	1	2	2	2	0	FANCI	solenoid	2
CAP18_C	PF12153.8	gi|297620453|ref|YP_003708590.1|	-	0.97	9.4	5.1	0.51	10.2	0.7	2.4	2	0	0	2	2	2	0	LPS	binding	domain	of	CAP18	(C	terminal)
AMPK1_CBM	PF16561.5	gi|297620454|ref|YP_003708591.1|	-	5e-05	23.4	0.0	0.22	11.8	0.0	4.2	4	1	1	5	5	5	1	Glycogen	recognition	site	of	AMP-activated	protein	kinase
Y_Y_Y	PF07495.13	gi|297620454|ref|YP_003708591.1|	-	0.00029	20.7	0.7	8	6.5	0.0	4.4	4	1	1	5	5	5	2	Y_Y_Y	domain
DUF5013	PF16405.5	gi|297620454|ref|YP_003708591.1|	-	0.00038	20.7	0.1	0.075	13.3	0.0	3.5	3	1	1	4	4	4	1	Domain	of	unknown	function	(DUF5013)
CarboxypepD_reg	PF13620.6	gi|297620454|ref|YP_003708591.1|	-	0.00078	19.7	0.0	4.2	7.7	0.0	4.0	4	0	0	4	4	4	1	Carboxypeptidase	regulatory-like	domain
fn3_3	PF14686.6	gi|297620454|ref|YP_003708591.1|	-	0.019	14.7	0.0	5.1	7.0	0.0	3.1	3	1	0	3	3	3	0	Polysaccharide	lyase	family	4,	domain	II
DUF4397	PF14344.6	gi|297620454|ref|YP_003708591.1|	-	0.11	13.3	0.3	10	6.9	0.0	3.5	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4397)
Pur_ac_phosph_N	PF16656.5	gi|297620455|ref|YP_003708592.1|	-	2.2e-09	37.7	0.2	6.8e-09	36.2	0.1	1.8	1	1	1	2	2	2	1	Purple	acid	Phosphatase,	N-terminal	domain
Metallophos	PF00149.28	gi|297620455|ref|YP_003708592.1|	-	3.2e-09	37.6	0.5	3.2e-09	37.6	0.5	1.6	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase
Na_H_Exchanger	PF00999.21	gi|297620456|ref|YP_003708593.1|	-	4.2e-58	196.9	44.7	5.9e-58	196.5	44.7	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.18	gi|297620456|ref|YP_003708593.1|	-	7.6e-22	77.8	1.2	1.4e-21	76.9	0.8	1.7	2	0	0	2	2	2	1	TrkA-N	domain
NAD_binding_7	PF13241.6	gi|297620456|ref|YP_003708593.1|	-	0.00015	22.2	0.1	0.00029	21.2	0.1	1.4	1	0	0	1	1	1	1	Putative	NAD(P)-binding
NAD_binding_2	PF03446.15	gi|297620456|ref|YP_003708593.1|	-	0.00016	21.9	0.0	0.00026	21.2	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
B12-binding	PF02310.19	gi|297620456|ref|YP_003708593.1|	-	0.00026	21.0	0.4	0.00082	19.4	0.4	1.8	1	1	0	1	1	1	1	B12	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|297620456|ref|YP_003708593.1|	-	0.00085	19.6	0.1	0.0016	18.7	0.1	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
3HCDH_N	PF02737.18	gi|297620456|ref|YP_003708593.1|	-	0.00089	19.2	0.0	0.0016	18.4	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|297620456|ref|YP_003708593.1|	-	0.0028	18.2	0.2	0.0071	16.9	0.2	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox_2	PF07992.14	gi|297620456|ref|YP_003708593.1|	-	0.017	14.4	0.0	0.031	13.5	0.0	1.4	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.19	gi|297620456|ref|YP_003708593.1|	-	0.022	14.2	0.0	0.036	13.4	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|297620456|ref|YP_003708593.1|	-	0.053	13.2	0.1	0.1	12.2	0.1	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Pyr_redox	PF00070.27	gi|297620456|ref|YP_003708593.1|	-	0.075	13.6	0.0	0.46	11.1	0.0	2.3	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
CitMHS	PF03600.16	gi|297620457|ref|YP_003708594.1|	-	1.9e-28	99.6	22.7	1.9e-28	99.6	22.7	1.9	1	1	1	2	2	2	1	Citrate	transporter
DUF1646	PF07854.12	gi|297620457|ref|YP_003708594.1|	-	0.12	11.8	14.2	0.012	15.0	5.0	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1646)
TLC	PF03219.14	gi|297620458|ref|YP_003708595.1|	-	6.2e-166	552.9	23.4	7.4e-166	552.7	23.4	1.0	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
MFS_1	PF07690.16	gi|297620458|ref|YP_003708595.1|	-	0.0001	21.4	28.9	0.0001	21.4	28.9	2.6	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
HSP90	PF00183.18	gi|297620459|ref|YP_003708596.1|	-	3.7e-65	220.8	8.9	2.5e-62	211.5	6.4	2.1	1	1	1	2	2	2	2	Hsp90	protein
HATPase_c_3	PF13589.6	gi|297620459|ref|YP_003708596.1|	-	4.9e-09	36.1	0.1	1.1e-08	35.0	0.1	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.26	gi|297620459|ref|YP_003708596.1|	-	2.4e-08	34.5	0.1	4.4e-08	33.6	0.1	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
UL21a	PF17636.2	gi|297620459|ref|YP_003708596.1|	-	0.073	13.1	0.0	0.19	11.7	0.0	1.6	1	0	0	1	1	1	0	Viral	Unique	Long	protein	21a
DUF771	PF05595.11	gi|297620459|ref|YP_003708596.1|	-	0.14	12.2	0.9	7	6.7	0.0	3.7	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF771)
Fer2	PF00111.27	gi|297620460|ref|YP_003708597.1|	-	3e-11	43.1	0.0	5.6e-11	42.3	0.0	1.5	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
NAD_binding_1	PF00175.21	gi|297620460|ref|YP_003708597.1|	-	4e-07	30.6	0.0	9.2e-07	29.5	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
FAD_binding_6	PF00970.24	gi|297620460|ref|YP_003708597.1|	-	1.3e-05	25.4	0.0	8.8e-05	22.8	0.0	2.1	2	0	0	2	2	2	1	Oxidoreductase	FAD-binding	domain
NAD_synthase	PF02540.17	gi|297620461|ref|YP_003708598.1|	-	3.8e-73	245.6	0.0	7.7e-73	244.6	0.0	1.5	1	0	0	1	1	1	1	NAD	synthase
CN_hydrolase	PF00795.22	gi|297620461|ref|YP_003708598.1|	-	6.4e-20	71.6	0.0	2.5e-19	69.6	0.0	1.8	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
tRNA_Me_trans	PF03054.16	gi|297620461|ref|YP_003708598.1|	-	0.0001	21.2	0.0	0.00015	20.7	0.0	1.3	1	0	0	1	1	1	1	tRNA	methyl	transferase
Asn_synthase	PF00733.21	gi|297620461|ref|YP_003708598.1|	-	0.0004	20.2	0.0	0.00059	19.6	0.0	1.3	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.13	gi|297620461|ref|YP_003708598.1|	-	0.0012	18.4	0.0	0.0023	17.5	0.0	1.5	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
RAMPs	PF03787.15	gi|297620463|ref|YP_003708600.1|	-	0.016	15.3	0.0	0.016	15.3	0.0	1.2	1	0	0	1	1	1	0	RAMP	superfamily
DDE_Tnp_1_assoc	PF13808.6	gi|297620464|ref|YP_003708601.1|	-	3.8e-27	94.1	0.2	2e-26	91.9	0.1	2.1	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.21	gi|297620464|ref|YP_003708601.1|	-	1.6e-18	67.2	0.0	3.6e-18	66.0	0.0	1.5	1	1	0	1	1	1	1	Transposase	DDE	domain
DEK_C	PF08766.11	gi|297620464|ref|YP_003708601.1|	-	0.017	15.0	0.0	0.032	14.1	0.0	1.5	1	0	0	1	1	1	0	DEK	C	terminal	domain
DDE_Tnp_1_4	PF13701.6	gi|297620464|ref|YP_003708601.1|	-	0.05	11.9	0.0	3	6.0	0.0	2.1	2	0	0	2	2	2	0	Transposase	DDE	domain	group	1
ATP-grasp_3	PF02655.14	gi|297620465|ref|YP_003708602.1|	-	7.3e-05	22.9	0.0	0.00012	22.1	0.0	1.4	1	1	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.11	gi|297620465|ref|YP_003708602.1|	-	0.0023	17.6	0.0	0.0031	17.1	0.0	1.1	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
THP2	PF09432.10	gi|297620465|ref|YP_003708602.1|	-	0.017	15.2	0.8	0.083	12.9	0.3	2.0	1	1	1	2	2	2	0	Tho	complex	subunit	THP2
Crinivirus_P26	PF07416.11	gi|297620465|ref|YP_003708602.1|	-	0.046	13.4	1.0	0.47	10.1	0.3	2.0	1	1	1	2	2	2	0	Crinivirus	P26	protein
Bactofilin	PF04519.13	gi|297620466|ref|YP_003708603.1|	-	0.02	15.1	4.2	2.1	8.7	3.1	2.8	1	1	0	1	1	1	0	Polymer-forming	cytoskeletal
DDE_3	PF13358.6	gi|297620467|ref|YP_003708604.1|	-	1.6e-30	105.8	0.0	2.6e-30	105.1	0.0	1.4	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.6	gi|297620467|ref|YP_003708604.1|	-	3.4e-17	61.8	0.1	1e-16	60.3	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|297620467|ref|YP_003708604.1|	-	1.8e-06	27.8	0.0	6.4e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|297620467|ref|YP_003708604.1|	-	6.1e-06	25.9	0.0	1.5e-05	24.6	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297620467|ref|YP_003708604.1|	-	1.3e-05	25.2	0.0	4.8e-05	23.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.26	gi|297620467|ref|YP_003708604.1|	-	3.4e-05	24.0	0.0	0.00038	20.6	0.0	2.2	2	0	0	2	2	2	1	Integrase	core	domain
DDE_Tnp_ISAZ013	PF07592.11	gi|297620467|ref|YP_003708604.1|	-	0.0001	21.4	0.3	0.21	10.5	0.1	2.3	2	0	0	2	2	2	2	Rhodopirellula	transposase	DDE	domain
Sigma70_r4_2	PF08281.12	gi|297620467|ref|YP_003708604.1|	-	0.00037	20.1	0.0	0.00077	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Terminase_5	PF06056.12	gi|297620467|ref|YP_003708604.1|	-	0.00062	19.6	0.0	0.0013	18.5	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_40	PF14493.6	gi|297620467|ref|YP_003708604.1|	-	0.0036	17.7	0.1	0.016	15.7	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|297620467|ref|YP_003708604.1|	-	0.0067	15.9	0.0	0.02	14.4	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
rve_3	PF13683.6	gi|297620467|ref|YP_003708604.1|	-	0.031	14.0	0.0	0.095	12.5	0.0	1.9	1	0	0	1	1	1	0	Integrase	core	domain
HTH_38	PF13936.6	gi|297620467|ref|YP_003708604.1|	-	0.038	13.8	1.6	0.43	10.4	0.0	2.7	3	0	0	3	3	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|297620467|ref|YP_003708604.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GerE	PF00196.19	gi|297620467|ref|YP_003708604.1|	-	0.16	11.6	0.0	0.65	9.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.6	gi|297620467|ref|YP_003708604.1|	-	0.85	9.9	3.6	5.9	7.2	0.1	3.1	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
DnaJ	PF00226.31	gi|297620468|ref|YP_003708605.1|	-	0.00015	21.9	4.1	0.00061	19.9	4.1	2.0	1	1	0	1	1	1	1	DnaJ	domain
GCP5-Mod21	PF14609.6	gi|297620468|ref|YP_003708605.1|	-	0.0049	15.3	2.2	0.0062	15.0	2.2	1.2	1	0	0	1	1	1	1	gamma-Tubulin	ring	complex	non-core	subunit	mod21
PHD_2	PF13831.6	gi|297620468|ref|YP_003708605.1|	-	0.034	13.7	0.2	0.062	12.9	0.2	1.4	1	0	0	1	1	1	0	PHD-finger
Redoxin	PF08534.10	gi|297620469|ref|YP_003708606.1|	-	1.6e-18	66.9	0.0	1.8e-18	66.6	0.0	1.0	1	0	0	1	1	1	1	Redoxin
AhpC-TSA	PF00578.21	gi|297620469|ref|YP_003708606.1|	-	1.5e-14	54.0	0.0	1.8e-14	53.7	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
DUF2511	PF10709.9	gi|297620469|ref|YP_003708606.1|	-	0.052	13.8	0.0	0.094	13.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2511)
tRNA-synt_2	PF00152.20	gi|297620471|ref|YP_003708608.1|	-	3.1e-35	121.8	0.2	1e-34	120.0	0.2	1.7	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.20	gi|297620471|ref|YP_003708608.1|	-	0.00021	20.8	0.2	0.17	11.3	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
Ish1	PF10281.9	gi|297620471|ref|YP_003708608.1|	-	0.14	12.4	0.1	5.9	7.3	0.0	2.5	2	0	0	2	2	2	0	Putative	stress-responsive	nuclear	envelope	protein
EFP_N	PF08207.12	gi|297620472|ref|YP_003708609.1|	-	1.4e-26	92.3	1.1	5.8e-26	90.3	0.4	2.2	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
Elong-fact-P_C	PF09285.11	gi|297620472|ref|YP_003708609.1|	-	2.9e-23	81.4	0.5	6.8e-23	80.2	0.5	1.7	1	0	0	1	1	1	1	Elongation	factor	P,	C-terminal
EFP	PF01132.20	gi|297620472|ref|YP_003708609.1|	-	2.8e-18	65.7	0.6	1.3e-17	63.6	0.2	2.1	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	OB	domain
zf-H2C2_2	PF13465.6	gi|297620474|ref|YP_003708611.1|	-	0.068	13.6	4.0	0.74	10.4	0.4	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf_UBZ	PF18439.1	gi|297620474|ref|YP_003708611.1|	-	0.13	11.9	0.2	0.13	11.9	0.2	2.5	2	1	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
A2L_zn_ribbon	PF08792.10	gi|297620474|ref|YP_003708611.1|	-	0.13	12.0	4.4	1.1	9.1	1.5	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
HypA	PF01155.19	gi|297620474|ref|YP_003708611.1|	-	0.15	12.1	0.9	0.18	11.8	0.9	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn-ribbon_8	PF09723.10	gi|297620474|ref|YP_003708611.1|	-	0.25	11.5	8.2	0.67	10.1	8.2	1.7	1	1	0	1	1	1	0	Zinc	ribbon	domain
zinc_ribbon_4	PF13717.6	gi|297620474|ref|YP_003708611.1|	-	0.35	10.8	0.2	0.35	10.8	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2_4	PF13894.6	gi|297620474|ref|YP_003708611.1|	-	0.75	10.8	6.2	9	7.4	1.6	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
PNP_UDP_1	PF01048.20	gi|297620475|ref|YP_003708612.1|	-	2.9e-19	69.3	0.0	3.6e-19	68.9	0.0	1.1	1	0	0	1	1	1	1	Phosphorylase	superfamily
2OG-FeII_Oxy_3	PF13640.6	gi|297620476|ref|YP_003708613.1|	-	1.1e-07	32.6	0.2	2.4e-07	31.5	0.0	1.6	2	0	0	2	2	2	1	2OG-Fe(II)	oxygenase	superfamily
2OG-FeII_Oxy_4	PF13661.6	gi|297620476|ref|YP_003708613.1|	-	0.0065	17.1	0.1	0.017	15.7	0.0	1.8	2	0	0	2	2	2	1	2OG-Fe(II)	oxygenase	superfamily
CarD_CdnL_TRCF	PF02559.16	gi|297620477|ref|YP_003708614.1|	-	1.5e-22	80.1	0.0	7.2e-22	77.9	0.0	2.3	2	0	0	2	2	2	1	CarD-like/TRCF	domain
UvrB_inter	PF17757.1	gi|297620477|ref|YP_003708614.1|	-	3.4e-22	78.4	0.0	9.5e-22	77.0	0.0	1.8	1	0	0	1	1	1	1	UvrB	interaction	domain
TRCF	PF03461.15	gi|297620477|ref|YP_003708614.1|	-	2.6e-21	75.8	0.0	8.2e-21	74.2	0.0	1.9	1	0	0	1	1	1	1	TRCF	domain
Helicase_C	PF00271.31	gi|297620477|ref|YP_003708614.1|	-	1.3e-19	70.5	0.4	6.7e-17	61.8	0.0	2.6	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|297620477|ref|YP_003708614.1|	-	1.1e-18	67.7	0.4	1e-17	64.5	0.1	2.5	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|297620477|ref|YP_003708614.1|	-	0.00024	21.2	0.0	0.00055	20.0	0.0	1.6	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
RC-P840_PscD	PF10657.9	gi|297620477|ref|YP_003708614.1|	-	0.048	13.8	0.1	4.4	7.4	0.0	2.4	2	0	0	2	2	2	0	Photosystem	P840	reaction	centre	protein	PscD
AAA_22	PF13401.6	gi|297620477|ref|YP_003708614.1|	-	0.12	12.6	0.1	2.5	8.4	0.1	2.9	1	1	0	1	1	1	0	AAA	domain
tRNA-synt_2c	PF01411.19	gi|297620478|ref|YP_003708615.1|	-	2.4e-216	719.5	0.0	7.2e-216	718.0	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetases	class	II	(A)
DHHA1	PF02272.19	gi|297620478|ref|YP_003708615.1|	-	1.8e-22	80.2	2.3	1.8e-22	80.2	2.3	2.5	3	0	0	3	3	3	1	DHHA1	domain
tRNA_SAD	PF07973.14	gi|297620478|ref|YP_003708615.1|	-	1e-14	54.3	0.3	3.2e-14	52.8	0.3	1.9	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
Wtap	PF17098.5	gi|297620478|ref|YP_003708615.1|	-	0.006	16.5	1.8	0.018	15.0	1.8	1.8	1	0	0	1	1	1	1	WTAP/Mum2p	family
HALZ	PF02183.18	gi|297620478|ref|YP_003708615.1|	-	0.052	13.8	2.1	0.13	12.5	2.1	1.7	1	0	0	1	1	1	0	Homeobox	associated	leucine	zipper
DUF2205	PF10224.9	gi|297620478|ref|YP_003708615.1|	-	2.5	8.2	10.3	7.6	6.6	2.7	3.6	3	0	0	3	3	3	0	Short	coiled-coil	protein
YabA	PF06156.13	gi|297620478|ref|YP_003708615.1|	-	7.7	7.2	8.2	2.1	9.0	0.9	2.9	3	0	0	3	3	3	0	Initiation	control	protein	YabA
ERAP1_C	PF11838.8	gi|297620480|ref|YP_003708617.1|	-	0.04	13.5	0.0	0.087	12.4	0.0	1.6	2	0	0	2	2	2	0	ERAP1-like	C-terminal	domain
TIP120	PF08623.10	gi|297620480|ref|YP_003708617.1|	-	0.075	12.8	0.1	0.15	11.8	0.1	1.4	1	0	0	1	1	1	0	TATA-binding	protein	interacting	(TIP20)
FlgN	PF05130.12	gi|297620480|ref|YP_003708617.1|	-	0.18	12.3	0.9	0.21	12.1	0.1	1.5	2	0	0	2	2	2	0	FlgN	protein
PhnA	PF03831.14	gi|297620481|ref|YP_003708618.1|	-	1.9e-34	117.3	6.3	1.9e-34	117.3	6.3	1.4	1	1	0	1	1	1	1	PhnA	domain
PhnA_Zn_Ribbon	PF08274.12	gi|297620481|ref|YP_003708618.1|	-	9.7e-12	44.6	4.3	1.7e-11	43.9	4.3	1.3	1	0	0	1	1	1	1	PhnA	Zinc-Ribbon
zf-RRN7	PF11781.8	gi|297620481|ref|YP_003708618.1|	-	0.0012	18.5	0.4	0.0022	17.6	0.4	1.4	1	0	0	1	1	1	1	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
A2L_zn_ribbon	PF08792.10	gi|297620481|ref|YP_003708618.1|	-	0.011	15.4	1.5	0.35	10.6	1.5	2.3	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|297620481|ref|YP_003708618.1|	-	0.018	15.0	1.2	0.027	14.4	1.2	1.3	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|297620481|ref|YP_003708618.1|	-	0.032	13.7	1.0	0.08	12.5	1.0	1.8	1	0	0	1	1	1	0	TFIIB	zinc-binding
HalOD2	PF18547.1	gi|297620481|ref|YP_003708618.1|	-	0.053	13.4	1.0	0.074	13.0	0.0	1.7	2	0	0	2	2	2	0	Halobacterial	output	domain	2
Lar_restr_allev	PF14354.6	gi|297620481|ref|YP_003708618.1|	-	0.095	13.1	1.7	0.23	11.9	1.7	1.7	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
IBR	PF01485.21	gi|297620481|ref|YP_003708618.1|	-	0.11	12.8	1.2	0.18	12.0	1.2	1.4	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
zinc_ribbon_4	PF13717.6	gi|297620481|ref|YP_003708618.1|	-	0.19	11.7	2.6	6.2	6.8	2.6	2.6	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn_Tnp_IS1	PF03811.13	gi|297620481|ref|YP_003708618.1|	-	1.1	9.0	4.0	1.5	8.6	0.1	2.2	1	1	1	2	2	2	0	InsA	N-terminal	domain
PADR1	PF08063.12	gi|297620481|ref|YP_003708618.1|	-	2	8.2	5.4	8.5	6.2	5.4	1.9	1	1	0	1	1	1	0	PADR1	(NUC008)	domain
Anti-TRAP	PF15777.5	gi|297620481|ref|YP_003708618.1|	-	2	8.4	4.7	33	4.6	4.7	2.7	1	1	0	1	1	1	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
Sulfate_transp	PF00916.20	gi|297620482|ref|YP_003708619.1|	-	3.1e-94	315.9	26.4	4.4e-94	315.3	26.4	1.2	1	0	0	1	1	1	1	Sulfate	permease	family
STAS	PF01740.21	gi|297620482|ref|YP_003708619.1|	-	2.1e-13	49.9	0.0	4.1e-13	49.0	0.0	1.4	1	0	0	1	1	1	1	STAS	domain
MFS_MOT1	PF16983.5	gi|297620482|ref|YP_003708619.1|	-	0.0041	17.5	7.2	0.0041	17.5	7.2	3.7	4	0	0	4	4	4	3	Molybdate	transporter	of	MFS	superfamily
DUF4506	PF14958.6	gi|297620482|ref|YP_003708619.1|	-	0.18	11.3	0.0	0.31	10.6	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4506)
Transketolase_N	PF00456.21	gi|297620483|ref|YP_003708620.1|	-	1.4e-133	445.0	0.0	1.7e-133	444.7	0.0	1.1	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
Transket_pyr	PF02779.24	gi|297620483|ref|YP_003708620.1|	-	2.8e-37	128.1	0.0	6.2e-37	127.0	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.20	gi|297620483|ref|YP_003708620.1|	-	6.6e-11	42.2	0.0	1.9e-10	40.7	0.0	1.8	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
DXP_synthase_N	PF13292.6	gi|297620483|ref|YP_003708620.1|	-	0.00028	20.2	0.1	0.36	10.0	0.0	2.8	1	1	1	2	2	2	2	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.21	gi|297620483|ref|YP_003708620.1|	-	0.013	15.3	0.0	0.23	11.2	0.0	2.8	2	1	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
URO-D	PF01208.17	gi|297620484|ref|YP_003708621.1|	-	2.1e-127	425.0	0.0	2.4e-127	424.9	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Amino_oxidase	PF01593.24	gi|297620485|ref|YP_003708622.1|	-	7.6e-45	154.0	0.0	1.1e-44	153.5	0.0	1.2	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.6	gi|297620485|ref|YP_003708622.1|	-	4.9e-10	39.5	0.0	1e-09	38.5	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
NAD_binding_9	PF13454.6	gi|297620485|ref|YP_003708622.1|	-	0.00044	20.3	0.1	0.96	9.4	0.0	2.5	2	1	0	2	2	2	2	FAD-NAD(P)-binding
DAO	PF01266.24	gi|297620485|ref|YP_003708622.1|	-	0.0043	16.7	0.0	0.0071	16.0	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
B-block_TFIIIC	PF04182.12	gi|297620485|ref|YP_003708622.1|	-	0.098	12.8	0.0	0.26	11.5	0.0	1.7	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
AAA_2	PF07724.14	gi|297620486|ref|YP_003708623.1|	-	2.5e-52	177.5	1.8	1.3e-50	171.8	0.0	3.1	3	0	0	3	3	3	1	AAA	domain	(Cdc48	subfamily)
Clp_N	PF02861.20	gi|297620486|ref|YP_003708623.1|	-	5.6e-35	119.3	3.7	3.1e-17	62.4	0.7	3.2	2	0	0	2	2	2	2	Clp	amino	terminal	domain,	pathogenicity	island	component
AAA_lid_9	PF17871.1	gi|297620486|ref|YP_003708623.1|	-	9.7e-33	112.2	0.5	9.7e-33	112.2	0.5	2.5	3	0	0	3	3	2	1	AAA	lid	domain
AAA	PF00004.29	gi|297620486|ref|YP_003708623.1|	-	7.5e-25	87.9	1.7	4.2e-12	46.6	0.1	3.0	3	0	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
ClpB_D2-small	PF10431.9	gi|297620486|ref|YP_003708623.1|	-	4.7e-24	84.3	1.8	9.2e-24	83.3	0.2	2.4	2	0	0	2	2	2	1	C-terminal,	D2-small	domain,	of	ClpB	protein
AAA_5	PF07728.14	gi|297620486|ref|YP_003708623.1|	-	8.1e-15	55.0	0.2	3.8e-10	39.9	0.0	3.0	2	1	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|297620486|ref|YP_003708623.1|	-	3.4e-11	43.8	4.7	0.00013	22.4	0.1	4.5	4	1	0	5	5	4	2	AAA	ATPase	domain
Sigma54_activat	PF00158.26	gi|297620486|ref|YP_003708623.1|	-	3.1e-09	36.8	0.0	1.3e-06	28.2	0.0	2.6	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_14	PF13173.6	gi|297620486|ref|YP_003708623.1|	-	1.4e-07	31.6	0.1	0.0063	16.5	0.0	3.1	3	0	0	3	3	3	2	AAA	domain
TniB	PF05621.11	gi|297620486|ref|YP_003708623.1|	-	4.3e-07	29.5	0.2	7.7e-05	22.2	0.1	3.2	2	1	0	2	2	2	1	Bacterial	TniB	protein
AAA_22	PF13401.6	gi|297620486|ref|YP_003708623.1|	-	6.7e-07	29.7	4.6	0.023	15.0	0.1	4.9	3	2	0	3	3	2	2	AAA	domain
UVR	PF02151.19	gi|297620486|ref|YP_003708623.1|	-	1.4e-06	27.8	4.9	4.8e-06	26.1	4.9	2.0	1	0	0	1	1	1	1	UvrB/uvrC	motif
AAA_23	PF13476.6	gi|297620486|ref|YP_003708623.1|	-	1.1e-05	26.1	7.9	0.002	18.7	0.7	3.3	2	1	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.17	gi|297620486|ref|YP_003708623.1|	-	1.5e-05	24.8	0.0	0.09	12.5	0.0	2.7	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
NACHT	PF05729.12	gi|297620486|ref|YP_003708623.1|	-	2.5e-05	24.3	0.0	0.042	13.8	0.0	2.8	2	0	0	2	2	2	2	NACHT	domain
RuvB_N	PF05496.12	gi|297620486|ref|YP_003708623.1|	-	0.00011	22.0	1.9	0.28	10.9	0.0	5.0	5	0	0	5	5	5	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_7	PF12775.7	gi|297620486|ref|YP_003708623.1|	-	0.00015	21.3	0.0	0.7	9.4	0.0	2.9	2	0	0	2	2	2	2	P-loop	containing	dynein	motor	region
AAA_25	PF13481.6	gi|297620486|ref|YP_003708623.1|	-	0.00035	20.2	0.1	0.26	10.8	0.0	3.1	3	0	0	3	3	2	1	AAA	domain
Torsin	PF06309.11	gi|297620486|ref|YP_003708623.1|	-	0.00048	20.2	0.0	0.006	16.7	0.0	2.3	2	0	0	2	2	2	1	Torsin
RNA_helicase	PF00910.22	gi|297620486|ref|YP_003708623.1|	-	0.0013	19.1	0.1	2.2	8.7	0.0	3.0	3	0	0	3	3	2	1	RNA	helicase
Roc	PF08477.13	gi|297620486|ref|YP_003708623.1|	-	0.0014	18.8	0.0	2.9	8.2	0.0	2.6	2	0	0	2	2	2	2	Ras	of	Complex,	Roc,	domain	of	DAPkinase
ResIII	PF04851.15	gi|297620486|ref|YP_003708623.1|	-	0.0015	18.6	0.0	0.79	9.7	0.0	4.0	4	1	1	5	5	4	1	Type	III	restriction	enzyme,	res	subunit
TsaE	PF02367.17	gi|297620486|ref|YP_003708623.1|	-	0.0016	18.5	0.0	1.5	8.8	0.0	2.7	2	0	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Mg_chelatase	PF01078.21	gi|297620486|ref|YP_003708623.1|	-	0.0027	17.1	0.6	1.6	8.1	0.5	3.4	2	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
RsgA_GTPase	PF03193.16	gi|297620486|ref|YP_003708623.1|	-	0.0066	16.4	0.0	2.8	7.8	0.0	2.6	2	0	0	2	2	2	1	RsgA	GTPase
AAA_18	PF13238.6	gi|297620486|ref|YP_003708623.1|	-	0.0071	16.9	2.6	3.3	8.3	0.0	3.7	4	0	0	4	4	3	1	AAA	domain
AAA_24	PF13479.6	gi|297620486|ref|YP_003708623.1|	-	0.01	15.6	0.0	6.5	6.4	0.0	3.6	4	0	0	4	4	3	0	AAA	domain
DUF1018	PF06252.12	gi|297620486|ref|YP_003708623.1|	-	0.012	16.6	0.5	0.037	15.0	0.5	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1018)
ABC_tran	PF00005.27	gi|297620486|ref|YP_003708623.1|	-	0.022	15.3	2.7	1.4	9.5	0.0	3.3	3	1	0	3	3	3	0	ABC	transporter
AAA_30	PF13604.6	gi|297620486|ref|YP_003708623.1|	-	0.027	14.2	0.0	1.6	8.4	0.0	3.0	2	1	0	2	2	2	0	AAA	domain
PhoH	PF02562.16	gi|297620486|ref|YP_003708623.1|	-	0.034	13.6	0.1	3	7.3	0.0	2.9	3	0	0	3	3	3	0	PhoH-like	protein
AAA_33	PF13671.6	gi|297620486|ref|YP_003708623.1|	-	0.037	14.2	0.2	6.1	7.0	0.0	3.0	3	0	0	3	3	2	0	AAA	domain
AAA_21	PF13304.6	gi|297620486|ref|YP_003708623.1|	-	0.045	13.6	0.1	19	4.9	0.0	3.2	3	0	0	3	3	3	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_3	PF07726.11	gi|297620486|ref|YP_003708623.1|	-	0.1	12.5	0.1	3.5	7.5	0.0	2.9	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.6	gi|297620486|ref|YP_003708623.1|	-	0.11	12.2	0.0	8.1	6.3	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.6	gi|297620486|ref|YP_003708623.1|	-	1.8	8.9	4.9	3.1	8.1	0.4	3.3	2	2	0	2	2	2	0	AAA	domain
DUF3638	PF12340.8	gi|297620488|ref|YP_003708625.1|	-	1.5e-19	70.2	0.2	3.7e-19	69.0	0.2	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3638)
DUF3105	PF11303.8	gi|297620488|ref|YP_003708625.1|	-	0.012	15.8	0.0	0.034	14.3	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3105)
SIMPL	PF04402.14	gi|297620488|ref|YP_003708625.1|	-	1.6	9.2	7.9	0.13	12.7	1.3	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF541)
TPR_2	PF07719.17	gi|297620488|ref|YP_003708625.1|	-	3	8.2	8.7	1.2	9.4	4.7	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
PTS_EIIA_2	PF00359.22	gi|297620489|ref|YP_003708626.1|	-	4.2e-22	78.6	0.1	5.6e-22	78.2	0.1	1.1	1	0	0	1	1	1	1	Phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	2
HTH_17	PF12728.7	gi|297620489|ref|YP_003708626.1|	-	9e-16	57.8	0.1	3.4e-15	55.9	0.1	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
MerR	PF00376.23	gi|297620489|ref|YP_003708626.1|	-	1e-05	25.2	0.0	1.9e-05	24.3	0.0	1.5	1	0	0	1	1	1	1	MerR	family	regulatory	protein
HTH_Tnp_ISL3	PF13542.6	gi|297620489|ref|YP_003708626.1|	-	2.4e-05	23.6	0.0	0.00087	18.7	0.1	2.4	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_23	PF13384.6	gi|297620489|ref|YP_003708626.1|	-	0.00021	21.0	0.0	0.0015	18.2	0.0	2.3	2	0	0	2	2	2	1	Homeodomain-like	domain
Phage_terminase	PF10668.9	gi|297620489|ref|YP_003708626.1|	-	0.00022	21.2	0.1	0.0007	19.5	0.1	2.0	2	0	0	2	2	1	1	Phage	terminase	small	subunit
MerR_1	PF13411.6	gi|297620489|ref|YP_003708626.1|	-	0.00022	21.2	0.5	0.00063	19.8	0.1	2.0	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
HTH_DeoR	PF08220.12	gi|297620489|ref|YP_003708626.1|	-	0.001	18.8	0.5	0.0034	17.1	0.1	2.0	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
HTH_3	PF01381.22	gi|297620489|ref|YP_003708626.1|	-	0.0014	18.6	0.0	0.022	14.8	0.0	2.5	3	0	0	3	3	3	1	Helix-turn-helix
Sigma70_r4_2	PF08281.12	gi|297620489|ref|YP_003708626.1|	-	0.0048	16.5	0.0	0.014	15.1	0.0	1.8	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_29	PF13551.6	gi|297620489|ref|YP_003708626.1|	-	0.018	15.1	0.0	0.099	12.7	0.0	2.1	2	0	0	2	2	2	0	Winged	helix-turn	helix
RWP-RK	PF02042.15	gi|297620489|ref|YP_003708626.1|	-	0.019	14.9	0.0	0.077	13.0	0.0	2.1	3	0	0	3	3	3	0	RWP-RK	domain
HTH_31	PF13560.6	gi|297620489|ref|YP_003708626.1|	-	0.019	15.3	0.0	0.05	13.9	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_38	PF13936.6	gi|297620489|ref|YP_003708626.1|	-	0.048	13.4	0.2	0.85	9.4	0.0	2.9	4	0	0	4	4	4	0	Helix-turn-helix	domain
LacI	PF00356.21	gi|297620489|ref|YP_003708626.1|	-	0.053	13.3	0.0	0.19	11.6	0.0	2.0	2	0	0	2	2	1	0	Bacterial	regulatory	proteins,	lacI	family
DUF658	PF04936.12	gi|297620489|ref|YP_003708626.1|	-	0.056	13.2	0.1	0.14	11.9	0.1	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF658)
YdaS_antitoxin	PF15943.5	gi|297620489|ref|YP_003708626.1|	-	0.062	13.2	0.0	0.3	11.0	0.0	2.1	2	1	1	3	3	3	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
P22_Cro	PF14549.6	gi|297620489|ref|YP_003708626.1|	-	0.15	11.9	0.0	2.2	8.2	0.0	2.3	2	0	0	2	2	2	0	DNA-binding	transcriptional	regulator	Cro
PTS_EIIA_2	PF00359.22	gi|297620490|ref|YP_003708627.1|	-	1e-34	119.5	0.0	1.2e-34	119.3	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	2
dUTPase	PF00692.19	gi|297620491|ref|YP_003708628.1|	-	9.9e-29	99.6	0.0	1.1e-28	99.4	0.0	1.0	1	0	0	1	1	1	1	dUTPase
Carboxyl_trans	PF01039.22	gi|297620492|ref|YP_003708629.1|	-	1.8e-21	76.3	0.5	4.5e-21	75.1	0.5	1.5	1	1	0	1	1	1	1	Carboxyl	transferase	domain
zf-ACC	PF17848.1	gi|297620492|ref|YP_003708629.1|	-	1.3e-08	34.7	9.6	2.1e-08	34.1	9.6	1.3	1	0	0	1	1	1	1	Acetyl-coA	carboxylase	zinc	finger	domain
eIF_4G1	PF12152.8	gi|297620492|ref|YP_003708629.1|	-	0.063	13.5	0.0	0.12	12.5	0.0	1.4	1	0	0	1	1	1	0	Eukaryotic	translation	initiation	factor	4G1
zinc_ribbon_5	PF13719.6	gi|297620492|ref|YP_003708629.1|	-	0.22	11.3	3.7	0.46	10.3	0.4	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Sod_Fe_C	PF02777.18	gi|297620493|ref|YP_003708630.1|	-	4.9e-39	132.6	0.2	2.5e-38	130.3	0.0	1.9	2	0	0	2	2	2	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.22	gi|297620493|ref|YP_003708630.1|	-	1.4e-32	112.0	0.8	2.8e-32	111.0	0.8	1.5	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
HHH_2	PF12826.7	gi|297620493|ref|YP_003708630.1|	-	0.18	11.9	0.0	0.5	10.5	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
Porphobil_deam	PF01379.20	gi|297620494|ref|YP_003708631.1|	-	2.2e-52	177.5	0.1	2.9e-52	177.2	0.1	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
HEM4	PF02602.15	gi|297620494|ref|YP_003708631.1|	-	8.9e-29	100.5	0.0	2.1e-28	99.3	0.0	1.5	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
ATPase	PF06745.13	gi|297620495|ref|YP_003708632.1|	-	6.3e-18	65.0	0.4	9.7e-11	41.4	0.2	2.2	1	1	0	2	2	2	2	KaiC
AAA_25	PF13481.6	gi|297620495|ref|YP_003708632.1|	-	1.1e-14	54.4	0.0	3e-14	53.0	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
Rubredoxin_2	PF18073.1	gi|297620495|ref|YP_003708632.1|	-	8.2e-11	41.4	7.8	1.2e-10	40.9	7.8	1.3	1	0	0	1	1	1	1	Rubredoxin	metal	binding	domain
DnaB_C	PF03796.15	gi|297620495|ref|YP_003708632.1|	-	2.2e-07	30.5	0.0	1.7e-05	24.3	0.0	2.4	2	1	1	3	3	3	1	DnaB-like	helicase	C	terminal	domain
Lon_C	PF05362.13	gi|297620495|ref|YP_003708632.1|	-	2.7e-06	27.0	0.8	4.4e-06	26.4	0.3	1.6	2	0	0	2	2	2	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
ChlI	PF13541.6	gi|297620495|ref|YP_003708632.1|	-	2.9e-06	27.1	0.0	5.6e-06	26.2	0.0	1.4	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
Rad51	PF08423.11	gi|297620495|ref|YP_003708632.1|	-	3.2e-06	26.6	0.2	0.0002	20.7	0.2	2.6	1	1	0	1	1	1	1	Rad51
AAA_22	PF13401.6	gi|297620495|ref|YP_003708632.1|	-	8e-06	26.2	0.1	1.9e-05	25.0	0.0	1.6	2	0	0	2	2	1	1	AAA	domain
AAA_16	PF13191.6	gi|297620495|ref|YP_003708632.1|	-	0.00012	22.5	0.0	0.00022	21.7	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
CbiA	PF01656.23	gi|297620495|ref|YP_003708632.1|	-	0.00017	21.6	0.1	0.00078	19.5	0.1	2.2	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
IstB_IS21	PF01695.17	gi|297620495|ref|YP_003708632.1|	-	0.00069	19.4	0.1	0.002	17.9	0.1	1.8	2	1	0	2	2	1	1	IstB-like	ATP	binding	protein
AAA_30	PF13604.6	gi|297620495|ref|YP_003708632.1|	-	0.0014	18.3	0.0	0.0023	17.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.14	gi|297620495|ref|YP_003708632.1|	-	0.0017	18.3	0.1	0.0033	17.4	0.1	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
NTPase_1	PF03266.15	gi|297620495|ref|YP_003708632.1|	-	0.0025	17.7	0.1	0.0062	16.5	0.1	1.6	1	1	0	1	1	1	1	NTPase
KTI12	PF08433.10	gi|297620495|ref|YP_003708632.1|	-	0.0046	16.5	0.0	0.0072	15.8	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
ABC_tran	PF00005.27	gi|297620495|ref|YP_003708632.1|	-	0.0066	17.0	0.1	0.013	16.0	0.1	1.5	1	0	0	1	1	1	1	ABC	transporter
KdpD	PF02702.17	gi|297620495|ref|YP_003708632.1|	-	0.0078	15.7	0.0	0.013	15.0	0.0	1.3	1	0	0	1	1	1	1	Osmosensitive	K+	channel	His	kinase	sensor	domain
NACHT	PF05729.12	gi|297620495|ref|YP_003708632.1|	-	0.0092	15.9	0.0	0.015	15.2	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
AAA_31	PF13614.6	gi|297620495|ref|YP_003708632.1|	-	0.01	15.8	0.0	0.03	14.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
RecA	PF00154.21	gi|297620495|ref|YP_003708632.1|	-	0.011	15.2	0.1	0.025	14.1	0.1	1.5	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
AAA_24	PF13479.6	gi|297620495|ref|YP_003708632.1|	-	0.012	15.3	0.0	0.039	13.7	0.0	1.8	1	1	0	2	2	2	0	AAA	domain
MeaB	PF03308.16	gi|297620495|ref|YP_003708632.1|	-	0.018	14.0	0.1	0.033	13.2	0.1	1.4	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
DUF815	PF05673.13	gi|297620495|ref|YP_003708632.1|	-	0.067	12.3	0.1	0.13	11.4	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA	PF00004.29	gi|297620495|ref|YP_003708632.1|	-	0.084	13.3	0.0	0.16	12.4	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.22	gi|297620495|ref|YP_003708632.1|	-	0.088	13.2	0.0	0.17	12.3	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
Fer4_NifH	PF00142.18	gi|297620495|ref|YP_003708632.1|	-	0.096	12.1	0.0	0.15	11.5	0.0	1.2	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
MobB	PF03205.14	gi|297620495|ref|YP_003708632.1|	-	0.12	12.3	0.1	3.7	7.5	0.1	2.4	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Ploopntkinase3	PF18751.1	gi|297620495|ref|YP_003708632.1|	-	0.15	12.0	0.0	0.27	11.2	0.0	1.3	1	0	0	1	1	1	0	P-loop	Nucleotide	Kinase3
DAP3	PF10236.9	gi|297620495|ref|YP_003708632.1|	-	0.18	10.9	0.1	0.36	10.0	0.1	1.4	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
zf-C3HC4_3	PF13920.6	gi|297620495|ref|YP_003708632.1|	-	0.26	11.2	1.3	0.49	10.3	1.3	1.3	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_6	PF14599.6	gi|297620495|ref|YP_003708632.1|	-	0.27	11.3	1.7	0.49	10.4	1.7	1.5	1	0	0	1	1	1	0	Zinc-ribbon
Vps36-NZF-N	PF16988.5	gi|297620495|ref|YP_003708632.1|	-	0.76	9.2	4.0	0.32	10.4	0.4	2.0	1	1	1	2	2	2	0	Vacuolar	protein	sorting	36	NZF-N	zinc-finger	domain
Ribonucleas_3_3	PF14622.6	gi|297620496|ref|YP_003708633.1|	-	8e-34	116.6	0.0	1.4e-33	115.8	0.0	1.4	1	0	0	1	1	1	1	Ribonuclease-III-like
Ribonuclease_3	PF00636.26	gi|297620496|ref|YP_003708633.1|	-	2.4e-22	79.5	0.1	7.6e-22	77.9	0.0	1.9	2	0	0	2	2	2	1	Ribonuclease	III	domain
dsrm	PF00035.26	gi|297620496|ref|YP_003708633.1|	-	1.1e-18	67.7	0.2	1.8e-18	67.0	0.2	1.4	1	0	0	1	1	1	1	Double-stranded	RNA	binding	motif
DND1_DSRM	PF14709.7	gi|297620496|ref|YP_003708633.1|	-	1e-06	28.9	0.5	2.6e-06	27.6	0.5	1.7	1	1	0	1	1	1	1	double	strand	RNA	binding	domain	from	DEAD	END	PROTEIN	1
T2SSN	PF01203.19	gi|297620498|ref|YP_003708635.1|	-	0.0016	18.7	0.4	0.0034	17.6	0.1	1.6	2	0	0	2	2	2	1	Type	II	secretion	system	(T2SS),	protein	N
Peptidase_C14	PF00656.22	gi|297620500|ref|YP_003708637.1|	-	4.9e-11	43.0	0.0	7.3e-11	42.5	0.0	1.2	1	0	0	1	1	1	1	Caspase	domain
Raptor_N	PF14538.6	gi|297620500|ref|YP_003708637.1|	-	0.098	12.6	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	Raptor	N-terminal	CASPase	like	domain
Acyltransf_C	PF16076.5	gi|297620501|ref|YP_003708638.1|	-	0.067	13.3	1.0	0.25	11.5	0.2	2.1	2	0	0	2	2	2	0	Acyltransferase	C-terminus
VCPO_N	PF17897.1	gi|297620502|ref|YP_003708639.1|	-	0.013	15.4	0.3	0.03	14.1	0.2	1.6	2	0	0	2	2	2	0	Vanadium	chloroperoxidase	N-terminal	domain
FRG	PF08867.11	gi|297620502|ref|YP_003708639.1|	-	0.14	13.1	0.3	0.63	11.0	0.0	2.2	2	1	0	2	2	2	0	FRG	domain
Trans_coact	PF16805.5	gi|297620504|ref|YP_003708641.1|	-	0.05	13.7	0.0	0.26	11.4	0.0	2.3	1	0	0	1	1	1	0	Phage	late-transcription	coactivator
DUF520	PF04461.13	gi|297620504|ref|YP_003708641.1|	-	0.07	13.2	6.3	0.21	11.7	5.7	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF520)
SurA_N_3	PF13624.6	gi|297620505|ref|YP_003708642.1|	-	0.00014	21.7	0.4	0.0012	18.6	0.0	2.6	2	0	0	2	2	2	1	SurA	N-terminal	domain
CBM9_1	PF06452.11	gi|297620506|ref|YP_003708643.1|	-	4.5e-05	23.4	0.0	7.2e-05	22.8	0.0	1.3	1	1	0	1	1	1	1	Carbohydrate	family	9	binding	domain-like
GCV_T	PF01571.21	gi|297620507|ref|YP_003708644.1|	-	6.9e-88	294.3	0.0	3.4e-87	292.1	0.0	1.8	2	0	0	2	2	2	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.11	gi|297620507|ref|YP_003708644.1|	-	1.3e-17	63.4	0.1	2.9e-17	62.3	0.1	1.6	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
SoxG	PF04268.12	gi|297620507|ref|YP_003708644.1|	-	0.09	12.9	0.0	1.9	8.6	0.0	2.6	3	0	0	3	3	3	0	Sarcosine	oxidase,	gamma	subunit	family
GCV_H	PF01597.19	gi|297620508|ref|YP_003708645.1|	-	1.4e-45	154.1	1.3	1.6e-45	153.9	1.3	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.22	gi|297620508|ref|YP_003708645.1|	-	4.2e-07	29.7	0.2	8e-07	28.8	0.2	1.5	1	0	0	1	1	1	1	Biotin-requiring	enzyme
RnfC_N	PF13375.6	gi|297620508|ref|YP_003708645.1|	-	1.4e-05	25.0	0.0	2e-05	24.5	0.0	1.2	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
Biotin_lipoyl_2	PF13533.6	gi|297620508|ref|YP_003708645.1|	-	0.014	15.2	0.1	0.73	9.7	0.0	2.4	1	1	1	2	2	2	0	Biotin-lipoyl	like
GDC-P	PF02347.16	gi|297620509|ref|YP_003708646.1|	-	6.5e-124	414.0	0.0	7.2e-124	413.9	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.19	gi|297620509|ref|YP_003708646.1|	-	5.8e-07	28.8	0.0	9.4e-07	28.1	0.0	1.4	1	0	0	1	1	1	1	Aminotransferase	class-V
Ubie_methyltran	PF01209.18	gi|297620509|ref|YP_003708646.1|	-	0.17	11.2	0.0	0.26	10.6	0.0	1.2	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
GDC-P	PF02347.16	gi|297620510|ref|YP_003708647.1|	-	1.1e-08	34.3	0.0	7.9e-06	25.0	0.0	2.1	2	0	0	2	2	2	2	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.19	gi|297620510|ref|YP_003708647.1|	-	1.4e-07	30.8	0.0	2e-07	30.3	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|297620510|ref|YP_003708647.1|	-	0.00023	20.5	0.0	0.00036	19.9	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Rnf-Nqr	PF02508.14	gi|297620511|ref|YP_003708648.1|	-	2.2e-51	174.3	20.6	2.6e-51	174.1	20.6	1.0	1	0	0	1	1	1	1	Rnf-Nqr	subunit,	membrane	protein
CTV_P6	PF06706.11	gi|297620511|ref|YP_003708648.1|	-	0.13	12.0	2.8	0.75	9.5	2.8	2.3	1	0	0	1	1	1	0	Citrus	tristeza	virus	6-kDa	protein
Rnf-Nqr	PF02508.14	gi|297620512|ref|YP_003708649.1|	-	4.3e-54	183.1	12.4	4.9e-54	182.9	12.4	1.0	1	0	0	1	1	1	1	Rnf-Nqr	subunit,	membrane	protein
DUF21	PF01595.20	gi|297620512|ref|YP_003708649.1|	-	0.019	14.7	5.2	0.032	14.0	5.2	1.3	1	0	0	1	1	1	0	Cyclin	M	transmembrane	N-terminal	domain
DUF624	PF04854.14	gi|297620512|ref|YP_003708649.1|	-	0.3	11.2	3.4	0.97	9.6	0.0	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function,	DUF624
FMN_bind	PF04205.14	gi|297620513|ref|YP_003708650.1|	-	3.6e-13	49.9	0.3	6.6e-13	49.0	0.3	1.5	1	0	0	1	1	1	1	FMN-binding	domain
Ac110_PIF	PF07280.11	gi|297620513|ref|YP_003708650.1|	-	5.3	6.9	5.1	23	4.9	0.0	2.4	2	0	0	2	2	2	0	Per	os	infectivity	factor	AC110
NQR2_RnfD_RnfE	PF03116.15	gi|297620514|ref|YP_003708651.1|	-	1.6e-100	336.3	6.4	9.2e-100	333.8	6.4	1.8	1	1	0	1	1	1	1	NQR2,	RnfD,	RnfE	family
DUF3768	PF12599.8	gi|297620515|ref|YP_003708652.1|	-	0.068	13.2	0.0	0.31	11.1	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3768)
DUF308	PF03729.13	gi|297620517|ref|YP_003708654.1|	-	7.3e-20	71.1	37.9	2e-10	40.9	13.3	3.1	1	1	2	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
Mobilization_B	PF17511.2	gi|297620517|ref|YP_003708654.1|	-	0.25	11.7	2.1	0.47	10.8	2.1	1.5	1	0	0	1	1	1	0	Mobilization	protein	B
Pribosyltran	PF00156.27	gi|297620518|ref|YP_003708655.1|	-	1.3e-07	31.3	0.0	1.7e-07	30.9	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
DZR	PF12773.7	gi|297620518|ref|YP_003708655.1|	-	0.00028	20.9	8.1	0.00045	20.2	7.6	1.7	1	1	0	1	1	1	1	Double	zinc	ribbon
Pribosyl_synth	PF14572.6	gi|297620518|ref|YP_003708655.1|	-	0.14	12.1	0.0	0.19	11.7	0.0	1.1	1	0	0	1	1	1	0	Phosphoribosyl	synthetase-associated	domain
zinc_ribbon_15	PF17032.5	gi|297620518|ref|YP_003708655.1|	-	2.8	8.7	9.4	9.7	7.0	1.0	2.4	2	0	0	2	2	2	0	zinc-ribbon	family
zinc-ribbons_6	PF07191.12	gi|297620518|ref|YP_003708655.1|	-	3.8	7.6	11.8	32	4.6	6.7	2.2	1	1	1	2	2	2	0	zinc-ribbons
HypA	PF01155.19	gi|297620518|ref|YP_003708655.1|	-	8.7	6.4	9.4	3.5	7.7	1.0	2.2	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
PIG-L	PF02585.17	gi|297620519|ref|YP_003708656.1|	-	1.7e-20	74.0	0.0	2.2e-20	73.6	0.0	1.2	1	0	0	1	1	1	1	GlcNAc-PI	de-N-acetylase
Glycos_transf_1	PF00534.20	gi|297620520|ref|YP_003708657.1|	-	8.4e-35	119.8	0.0	1.2e-34	119.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|297620520|ref|YP_003708657.1|	-	5.8e-27	94.8	0.0	1.2e-26	93.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|297620520|ref|YP_003708657.1|	-	2e-25	89.7	0.4	1.6e-24	86.8	0.4	2.1	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.6	gi|297620520|ref|YP_003708657.1|	-	4.7e-15	55.8	0.4	8.6e-15	55.0	0.4	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_4_4	PF13579.6	gi|297620520|ref|YP_003708657.1|	-	4.2e-14	53.3	0.0	2.2e-13	51.0	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|297620520|ref|YP_003708657.1|	-	2.7e-06	27.7	0.0	9.3e-06	26.0	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.11	gi|297620520|ref|YP_003708657.1|	-	0.00062	19.5	2.3	0.88	9.2	0.1	3.0	1	1	1	2	2	2	2	Starch	synthase	catalytic	domain
Bac_DnaA	PF00308.18	gi|297620521|ref|YP_003708658.1|	-	3e-79	265.9	0.7	5.6e-79	265.0	0.3	1.6	2	0	0	2	2	2	1	Bacterial	dnaA	protein
Bac_DnaA_C	PF08299.11	gi|297620521|ref|YP_003708658.1|	-	2.1e-22	78.9	0.1	6.1e-22	77.4	0.1	1.8	2	0	0	2	2	1	1	Bacterial	dnaA	protein	helix-turn-helix
DnaA_N	PF11638.8	gi|297620521|ref|YP_003708658.1|	-	2.4e-12	46.4	0.1	5.5e-12	45.3	0.1	1.7	1	0	0	1	1	1	1	DnaA	N-terminal	domain
IstB_IS21	PF01695.17	gi|297620521|ref|YP_003708658.1|	-	3.4e-07	30.1	0.0	7.1e-07	29.1	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AFG1_ATPase	PF03969.16	gi|297620521|ref|YP_003708658.1|	-	0.00035	19.6	0.4	0.0017	17.3	0.1	2.1	2	1	0	2	2	2	1	AFG1-like	ATPase
AAA	PF00004.29	gi|297620521|ref|YP_003708658.1|	-	0.012	16.0	0.0	0.029	14.8	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|297620521|ref|YP_003708658.1|	-	0.015	15.5	2.2	0.67	10.2	2.2	2.7	1	1	0	1	1	1	0	AAA	domain
ATPase_2	PF01637.18	gi|297620521|ref|YP_003708658.1|	-	0.017	15.1	0.0	0.039	13.9	0.0	1.5	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
NTPase_1	PF03266.15	gi|297620521|ref|YP_003708658.1|	-	0.019	14.9	0.6	6.4	6.7	0.1	2.5	1	1	1	2	2	2	0	NTPase
AAA_16	PF13191.6	gi|297620521|ref|YP_003708658.1|	-	0.025	15.0	0.0	0.059	13.8	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_19	PF13245.6	gi|297620521|ref|YP_003708658.1|	-	0.035	14.5	0.1	0.1	12.9	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
VPS53_C	PF16854.5	gi|297620521|ref|YP_003708658.1|	-	0.15	12.0	2.8	0.6	9.9	0.5	2.4	2	1	0	2	2	2	0	Vacuolar	protein	sorting-associated	protein	53	C-terminus
SBP_bac_3	PF00497.20	gi|297620522|ref|YP_003708659.1|	-	9.1e-28	97.2	0.0	1.2e-27	96.8	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
NMT1	PF09084.11	gi|297620522|ref|YP_003708659.1|	-	0.011	15.6	0.0	0.63	9.9	0.0	2.2	2	0	0	2	2	2	0	NMT1/THI5	like
Lig_chan-Glu_bd	PF10613.9	gi|297620522|ref|YP_003708659.1|	-	0.03	14.5	0.0	0.2	11.9	0.0	2.1	1	1	0	1	1	1	0	Ligated	ion	channel	L-glutamate-	and	glycine-binding	site
Phosphonate-bd	PF12974.7	gi|297620522|ref|YP_003708659.1|	-	0.11	12.0	0.0	0.23	11.0	0.0	1.5	2	0	0	2	2	2	0	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
DsbD_2	PF13386.6	gi|297620524|ref|YP_003708661.1|	-	3.6e-27	95.6	22.8	4.6e-27	95.2	22.8	1.1	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
2OG-FeII_Oxy	PF03171.20	gi|297620525|ref|YP_003708662.1|	-	0.00023	21.6	0.0	0.00042	20.8	0.0	1.4	1	0	0	1	1	1	1	2OG-Fe(II)	oxygenase	superfamily
YlbE	PF14003.6	gi|297620525|ref|YP_003708662.1|	-	0.012	16.0	0.1	0.038	14.4	0.1	1.8	1	0	0	1	1	1	0	YlbE-like	protein
Phage_holin_6_1	PF09682.10	gi|297620525|ref|YP_003708662.1|	-	0.088	13.2	0.0	0.15	12.5	0.0	1.3	1	0	0	1	1	1	0	Bacteriophage	holin	of	superfamily	6	(Holin_LLH)
AhpC-TSA	PF00578.21	gi|297620526|ref|YP_003708663.1|	-	5.8e-39	132.8	0.0	7e-39	132.6	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|297620526|ref|YP_003708663.1|	-	1.5e-21	76.6	0.0	1.7e-21	76.5	0.0	1.0	1	0	0	1	1	1	1	Redoxin
SCO1-SenC	PF02630.14	gi|297620526|ref|YP_003708663.1|	-	0.0027	17.6	0.0	0.0062	16.4	0.0	1.6	2	0	0	2	2	2	1	SCO1/SenC
AhpC-TSA_2	PF13911.6	gi|297620526|ref|YP_003708663.1|	-	0.0067	16.5	0.0	0.013	15.6	0.0	1.5	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
Thioredoxin_8	PF13905.6	gi|297620526|ref|YP_003708663.1|	-	0.013	15.8	0.0	0.019	15.2	0.0	1.3	1	0	0	1	1	1	0	Thioredoxin-like
GSHPx	PF00255.19	gi|297620526|ref|YP_003708663.1|	-	0.053	13.1	0.0	0.09	12.4	0.0	1.3	1	0	0	1	1	1	0	Glutathione	peroxidase
SBP_bac_5	PF00496.22	gi|297620528|ref|YP_003708665.1|	-	9e-44	150.0	0.1	1.4e-43	149.4	0.1	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
ExsD	PF16806.5	gi|297620528|ref|YP_003708665.1|	-	0.052	13.5	0.0	0.098	12.6	0.0	1.3	1	0	0	1	1	1	0	Antiactivator	protein	ExsD
BPD_transp_1	PF00528.22	gi|297620529|ref|YP_003708666.1|	-	1.4e-28	99.9	5.8	1.4e-28	99.9	5.8	2.1	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF2781	PF10914.8	gi|297620529|ref|YP_003708666.1|	-	0.11	12.9	3.4	0.61	10.5	3.4	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2781)
DDE_3	PF13358.6	gi|297620530|ref|YP_003708667.1|	-	1.6e-30	105.8	0.0	2.6e-30	105.1	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.6	gi|297620530|ref|YP_003708667.1|	-	3.4e-17	61.8	0.1	1e-16	60.3	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|297620530|ref|YP_003708667.1|	-	1.8e-06	27.9	0.0	6.4e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|297620530|ref|YP_003708667.1|	-	9e-06	25.3	0.0	2.2e-05	24.1	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297620530|ref|YP_003708667.1|	-	1.3e-05	25.2	0.0	4.8e-05	23.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.26	gi|297620530|ref|YP_003708667.1|	-	3.5e-05	24.0	0.0	0.00038	20.6	0.0	2.2	2	0	0	2	2	2	1	Integrase	core	domain
DDE_Tnp_ISAZ013	PF07592.11	gi|297620530|ref|YP_003708667.1|	-	0.00011	21.4	0.3	0.21	10.5	0.1	2.2	2	0	0	2	2	2	2	Rhodopirellula	transposase	DDE	domain
Sigma70_r4_2	PF08281.12	gi|297620530|ref|YP_003708667.1|	-	0.00037	20.1	0.0	0.00077	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Terminase_5	PF06056.12	gi|297620530|ref|YP_003708667.1|	-	0.00062	19.6	0.0	0.0013	18.5	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_40	PF14493.6	gi|297620530|ref|YP_003708667.1|	-	0.0036	17.7	0.1	0.016	15.7	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|297620530|ref|YP_003708667.1|	-	0.0063	16.0	0.0	0.017	14.6	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
rve_3	PF13683.6	gi|297620530|ref|YP_003708667.1|	-	0.026	14.3	0.0	0.082	12.7	0.0	1.9	1	0	0	1	1	1	0	Integrase	core	domain
HTH_38	PF13936.6	gi|297620530|ref|YP_003708667.1|	-	0.038	13.8	1.6	0.43	10.4	0.0	2.7	3	0	0	3	3	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|297620530|ref|YP_003708667.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.7	gi|297620530|ref|YP_003708667.1|	-	0.13	12.3	0.0	0.28	11.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.19	gi|297620530|ref|YP_003708667.1|	-	0.16	11.5	0.0	0.65	9.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.6	gi|297620530|ref|YP_003708667.1|	-	0.86	9.9	3.6	5.9	7.2	0.1	3.1	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
BPD_transp_1	PF00528.22	gi|297620531|ref|YP_003708668.1|	-	2.1e-31	109.1	4.3	2.1e-31	109.1	4.3	2.8	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.7	gi|297620531|ref|YP_003708668.1|	-	5.6e-08	32.6	0.8	5.6e-08	32.6	0.8	3.7	3	0	0	3	3	3	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
CARDB	PF07705.11	gi|297620533|ref|YP_003708670.1|	-	0.015	15.6	0.0	0.033	14.5	0.0	1.6	1	1	0	1	1	1	0	CARDB
AAA_14	PF13173.6	gi|297620533|ref|YP_003708670.1|	-	0.087	12.9	0.0	0.11	12.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
PHO4	PF01384.20	gi|297620534|ref|YP_003708671.1|	-	1.4e-117	392.5	30.0	1.7e-116	388.9	30.0	2.0	1	1	0	1	1	1	1	Phosphate	transporter	family
ULD	PF16534.5	gi|297620534|ref|YP_003708671.1|	-	0.0027	17.8	0.0	0.0056	16.7	0.0	1.4	1	0	0	1	1	1	1	Ubiquitin-like	oligomerisation	domain	of	SATB
HTH_IclR	PF09339.10	gi|297620534|ref|YP_003708671.1|	-	0.0091	15.8	1.1	2.3	8.1	0.1	2.6	2	0	0	2	2	2	2	IclR	helix-turn-helix	domain
ASL_C2	PF14698.6	gi|297620534|ref|YP_003708671.1|	-	0.075	13.8	0.0	25	5.7	0.0	2.8	2	0	0	2	2	2	0	Argininosuccinate	lyase	C-terminal
PhoU_div	PF01865.16	gi|297620535|ref|YP_003708672.1|	-	7.3e-56	188.9	7.6	8.2e-56	188.7	7.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
APG5	PF04106.12	gi|297620535|ref|YP_003708672.1|	-	0.0075	15.9	0.4	0.012	15.2	0.4	1.3	1	1	0	1	1	1	1	Autophagy	protein	Apg5
PhoU	PF01895.19	gi|297620535|ref|YP_003708672.1|	-	0.01	16.3	6.0	0.12	12.8	1.5	2.6	1	1	1	2	2	2	0	PhoU	domain
ATP-cone	PF03477.16	gi|297620535|ref|YP_003708672.1|	-	0.014	16.0	1.9	0.33	11.5	0.4	2.6	2	1	0	2	2	2	0	ATP	cone	domain
DUF2621	PF11084.8	gi|297620535|ref|YP_003708672.1|	-	0.14	12.2	1.3	0.31	11.0	0.2	2.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2621)
Sod_Ni	PF09055.11	gi|297620535|ref|YP_003708672.1|	-	0.16	12.5	4.1	1.8	9.1	0.3	2.4	2	1	0	2	2	2	0	Nickel-containing	superoxide	dismutase
ABC_tran	PF00005.27	gi|297620536|ref|YP_003708673.1|	-	1.3e-30	106.7	0.0	2e-30	106.1	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|297620536|ref|YP_003708673.1|	-	1.4e-16	60.7	0.0	2.6e-16	59.9	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
SMC_N	PF02463.19	gi|297620536|ref|YP_003708673.1|	-	1.2e-07	31.4	0.0	2.2e-07	30.5	0.0	1.3	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|297620536|ref|YP_003708673.1|	-	0.00035	20.5	0.1	0.0026	17.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|297620536|ref|YP_003708673.1|	-	0.00091	19.5	1.2	0.016	15.5	1.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|297620536|ref|YP_003708673.1|	-	0.039	13.7	0.1	0.072	12.8	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF87	PF01935.17	gi|297620536|ref|YP_003708673.1|	-	0.073	13.2	0.1	0.18	11.9	0.1	1.6	1	0	0	1	1	1	0	Helicase	HerA,	central	domain
Mg_chelatase	PF01078.21	gi|297620536|ref|YP_003708673.1|	-	0.075	12.4	0.1	0.7	9.2	0.1	2.0	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
NB-ARC	PF00931.22	gi|297620536|ref|YP_003708673.1|	-	0.1	11.7	0.2	6.6	5.8	0.0	2.1	2	0	0	2	2	2	0	NB-ARC	domain
AAA_7	PF12775.7	gi|297620536|ref|YP_003708673.1|	-	0.15	11.6	0.0	0.3	10.6	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
ABC_ATPase	PF09818.9	gi|297620536|ref|YP_003708673.1|	-	0.15	10.8	1.5	0.5	9.1	1.5	1.7	1	1	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
AAA_16	PF13191.6	gi|297620536|ref|YP_003708673.1|	-	0.18	12.2	0.2	0.3	11.5	0.2	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_24	PF13479.6	gi|297620536|ref|YP_003708673.1|	-	0.31	10.8	0.5	0.93	9.2	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|297620537|ref|YP_003708674.1|	-	1.1e-30	107.0	0.0	1.5e-30	106.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_22	PF13401.6	gi|297620537|ref|YP_003708674.1|	-	6.9e-05	23.1	1.0	0.0012	19.1	1.0	2.2	1	1	0	1	1	1	1	AAA	domain
oligo_HPY	PF08352.12	gi|297620537|ref|YP_003708674.1|	-	0.00039	20.9	0.0	0.00072	20.0	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
SMC_N	PF02463.19	gi|297620537|ref|YP_003708674.1|	-	0.0024	17.3	0.2	0.007	15.8	0.2	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|297620537|ref|YP_003708674.1|	-	0.0037	17.0	0.0	0.0066	16.2	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|297620537|ref|YP_003708674.1|	-	0.0056	17.1	0.1	0.0087	16.4	0.1	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
Sigma54_activat	PF00158.26	gi|297620537|ref|YP_003708674.1|	-	0.035	13.8	0.0	3.8	7.2	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
DUF3987	PF13148.6	gi|297620537|ref|YP_003708674.1|	-	0.057	12.4	0.0	0.085	11.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3987)
AAA_21	PF13304.6	gi|297620537|ref|YP_003708674.1|	-	0.083	12.7	1.0	8.1	6.2	0.1	2.3	1	1	1	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_30	PF13604.6	gi|297620537|ref|YP_003708674.1|	-	0.085	12.6	0.1	0.42	10.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
TniB	PF05621.11	gi|297620537|ref|YP_003708674.1|	-	0.14	11.5	0.1	1.6	8.1	0.0	2.2	2	0	0	2	2	2	0	Bacterial	TniB	protein
AAA_33	PF13671.6	gi|297620537|ref|YP_003708674.1|	-	0.22	11.7	0.1	0.59	10.3	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
MFS_1	PF07690.16	gi|297620538|ref|YP_003708675.1|	-	1.7e-16	60.1	49.0	1.6e-14	53.7	38.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
PseudoU_synth_2	PF00849.22	gi|297620540|ref|YP_003708677.1|	-	1.4e-15	57.7	0.0	1.3e-14	54.5	0.0	2.0	1	1	0	1	1	1	1	RNA	pseudouridylate	synthase
S4	PF01479.25	gi|297620540|ref|YP_003708677.1|	-	1.4e-09	37.5	0.6	6.1e-09	35.5	0.1	2.3	1	1	1	2	2	2	1	S4	domain
RHD_dimer	PF16179.5	gi|297620540|ref|YP_003708677.1|	-	0.12	12.4	0.1	0.54	10.3	0.0	2.0	2	0	0	2	2	2	0	Rel	homology	dimerisation	domain
His_Phos_1	PF00300.22	gi|297620541|ref|YP_003708678.1|	-	3.1e-33	115.1	0.0	3.4e-18	66.0	0.0	2.0	1	1	0	2	2	2	2	Histidine	phosphatase	superfamily	(branch	1)
Aminotran_5	PF00266.19	gi|297620542|ref|YP_003708679.1|	-	9.4e-43	146.6	0.0	1.2e-42	146.3	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|297620542|ref|YP_003708679.1|	-	0.055	12.7	0.1	0.16	11.2	0.1	1.9	1	1	0	1	1	1	0	Beta-eliminating	lyase
NifU_N	PF01592.16	gi|297620543|ref|YP_003708680.1|	-	5.3e-15	55.7	0.0	8.6e-15	55.0	0.0	1.3	1	0	0	1	1	1	1	NifU-like	N	terminal	domain
NifU	PF01106.17	gi|297620543|ref|YP_003708680.1|	-	1.1e-14	54.4	0.1	1.8e-14	53.6	0.1	1.4	1	0	0	1	1	1	1	NifU-like	domain
Thioredoxin	PF00085.20	gi|297620544|ref|YP_003708681.1|	-	9.8e-27	93.0	0.0	1.3e-26	92.6	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|297620544|ref|YP_003708681.1|	-	1e-09	38.8	0.0	1.2e-08	35.4	0.0	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
OST3_OST6	PF04756.13	gi|297620544|ref|YP_003708681.1|	-	4.1e-08	32.9	0.0	5.4e-08	32.5	0.0	1.3	1	0	0	1	1	1	1	OST3	/	OST6	family,	transporter	family
Thioredoxin_8	PF13905.6	gi|297620544|ref|YP_003708681.1|	-	1.3e-05	25.4	0.0	0.0099	16.2	0.0	2.4	1	1	1	2	2	2	2	Thioredoxin-like
Thioredoxin_6	PF13848.6	gi|297620544|ref|YP_003708681.1|	-	4.5e-05	23.4	0.0	5.7e-05	23.1	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin-like	domain
AhpC-TSA	PF00578.21	gi|297620544|ref|YP_003708681.1|	-	4.9e-05	23.2	0.0	9.3e-05	22.3	0.0	1.5	1	1	0	1	1	1	1	AhpC/TSA	family
Thioredoxin_9	PF14595.6	gi|297620544|ref|YP_003708681.1|	-	0.0021	17.8	0.0	0.0028	17.4	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_7	PF13899.6	gi|297620544|ref|YP_003708681.1|	-	0.0033	17.6	0.0	0.0051	17.0	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_3	PF13192.6	gi|297620544|ref|YP_003708681.1|	-	0.016	15.2	0.0	0.023	14.8	0.0	1.3	1	0	0	1	1	1	0	Thioredoxin	domain
DIM1	PF02966.16	gi|297620544|ref|YP_003708681.1|	-	0.021	14.6	0.0	0.026	14.3	0.0	1.1	1	0	0	1	1	1	0	Mitosis	protein	DIM1
Redoxin	PF08534.10	gi|297620544|ref|YP_003708681.1|	-	0.033	13.9	0.2	0.15	11.7	0.2	1.8	1	1	1	2	2	2	0	Redoxin
DUF953	PF06110.11	gi|297620544|ref|YP_003708681.1|	-	0.035	13.7	0.2	0.44	10.2	0.1	2.3	1	1	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF953)
BPL_LplA_LipB	PF03099.19	gi|297620545|ref|YP_003708682.1|	-	7.1e-13	48.6	0.0	9.4e-13	48.2	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
BPL_C	PF02237.17	gi|297620545|ref|YP_003708682.1|	-	0.035	14.0	0.0	0.068	13.1	0.0	1.4	1	0	0	1	1	1	0	Biotin	protein	ligase	C	terminal	domain
Diphthamide_syn	PF01866.17	gi|297620545|ref|YP_003708682.1|	-	0.17	11.3	0.0	0.33	10.3	0.0	1.4	2	0	0	2	2	2	0	Putative	diphthamide	synthesis	protein
FTSW_RODA_SPOVE	PF01098.19	gi|297620546|ref|YP_003708683.1|	-	2e-66	224.5	22.3	2.4e-66	224.2	22.3	1.0	1	0	0	1	1	1	1	Cell	cycle	protein
DUF2459	PF09601.10	gi|297620546|ref|YP_003708683.1|	-	0.037	13.8	0.1	0.076	12.8	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2459)
Ribosomal_S10	PF00338.22	gi|297620549|ref|YP_003708686.1|	-	2.1e-36	124.1	0.0	2.4e-36	123.9	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
GTP_EFTU	PF00009.27	gi|297620550|ref|YP_003708687.1|	-	2.2e-66	223.1	0.2	3.5e-66	222.5	0.2	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.18	gi|297620550|ref|YP_003708687.1|	-	3.2e-44	149.6	0.3	1.3e-43	147.6	0.2	2.1	2	0	0	2	2	2	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.6	gi|297620550|ref|YP_003708687.1|	-	2.7e-35	120.3	0.1	6.2e-35	119.1	0.1	1.7	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.24	gi|297620550|ref|YP_003708687.1|	-	9.7e-30	102.5	0.1	3.9e-29	100.5	0.1	2.2	2	0	0	2	2	2	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.25	gi|297620550|ref|YP_003708687.1|	-	1.6e-14	54.0	0.2	7.3e-14	51.9	0.0	2.3	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
RF3_C	PF16658.5	gi|297620550|ref|YP_003708687.1|	-	3.5e-09	36.6	0.0	7.6e-09	35.5	0.0	1.5	1	0	0	1	1	1	1	Class	II	release	factor	RF3,	C-terminal	domain
MMR_HSR1	PF01926.23	gi|297620550|ref|YP_003708687.1|	-	1.4e-05	25.1	0.0	3.7e-05	23.8	0.0	1.8	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
AIG1	PF04548.16	gi|297620550|ref|YP_003708687.1|	-	0.012	14.9	0.0	0.026	13.9	0.0	1.4	1	0	0	1	1	1	0	AIG1	family
Ribosomal_S7	PF00177.21	gi|297620551|ref|YP_003708688.1|	-	1.2e-61	206.8	2.5	1.3e-61	206.6	2.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
Ribosom_S12_S23	PF00164.25	gi|297620552|ref|YP_003708689.1|	-	2.2e-40	136.8	2.3	2.5e-40	136.6	2.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
Acyltransferase	PF01553.21	gi|297620553|ref|YP_003708690.1|	-	1.5e-22	79.7	0.0	2.1e-22	79.2	0.0	1.2	1	0	0	1	1	1	1	Acyltransferase
Cytidylate_kin	PF02224.18	gi|297620556|ref|YP_003708693.1|	-	2.6e-69	233.2	0.0	3e-69	233.0	0.0	1.0	1	0	0	1	1	1	1	Cytidylate	kinase
Cytidylate_kin2	PF13189.6	gi|297620556|ref|YP_003708693.1|	-	8.2e-10	39.1	0.9	3e-09	37.2	0.9	1.8	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.6	gi|297620556|ref|YP_003708693.1|	-	2.1e-07	31.5	0.1	5e-07	30.3	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|297620556|ref|YP_003708693.1|	-	1.3e-05	25.1	0.4	5.2e-05	23.2	0.4	1.9	1	1	0	1	1	1	1	Deoxynucleoside	kinase
AAA_17	PF13207.6	gi|297620556|ref|YP_003708693.1|	-	8.5e-05	23.0	0.7	0.0032	17.9	0.1	2.4	2	1	0	2	2	2	1	AAA	domain
SKI	PF01202.22	gi|297620556|ref|YP_003708693.1|	-	0.00012	22.3	4.4	0.0023	18.1	0.1	2.7	3	1	0	3	3	3	1	Shikimate	kinase
AAA	PF00004.29	gi|297620556|ref|YP_003708693.1|	-	0.00038	20.9	0.0	0.00082	19.8	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|297620556|ref|YP_003708693.1|	-	0.00059	20.1	0.1	0.0029	17.9	0.1	2.1	2	1	0	2	2	2	1	AAA	domain
CoaE	PF01121.20	gi|297620556|ref|YP_003708693.1|	-	0.0015	18.2	0.1	0.0023	17.6	0.1	1.5	1	1	0	1	1	1	1	Dephospho-CoA	kinase
AAA_33	PF13671.6	gi|297620556|ref|YP_003708693.1|	-	0.0042	17.2	0.0	0.0091	16.2	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
ADK	PF00406.22	gi|297620556|ref|YP_003708693.1|	-	0.032	14.3	0.1	0.42	10.7	0.0	2.5	2	1	0	2	2	2	0	Adenylate	kinase
TsaE	PF02367.17	gi|297620556|ref|YP_003708693.1|	-	0.036	14.1	0.2	0.084	12.9	0.1	1.6	1	1	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
ABC_tran	PF00005.27	gi|297620556|ref|YP_003708693.1|	-	0.049	14.2	0.1	0.11	13.0	0.1	1.8	1	1	0	1	1	1	0	ABC	transporter
AAA_5	PF07728.14	gi|297620556|ref|YP_003708693.1|	-	0.059	13.4	0.0	0.51	10.3	0.0	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.6	gi|297620556|ref|YP_003708693.1|	-	0.083	13.1	0.0	0.15	12.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
RuvB_N	PF05496.12	gi|297620556|ref|YP_003708693.1|	-	0.12	12.1	0.0	0.23	11.2	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Thymidylate_kin	PF02223.17	gi|297620556|ref|YP_003708693.1|	-	0.51	10.0	4.9	10	5.7	0.1	3.0	1	1	2	3	3	3	0	Thymidylate	kinase
CTP_transf_1	PF01148.20	gi|297620557|ref|YP_003708694.1|	-	1.1e-55	189.2	10.2	1.3e-55	189.1	10.2	1.0	1	0	0	1	1	1	1	Cytidylyltransferase	family
CarS-like	PF01864.17	gi|297620557|ref|YP_003708694.1|	-	3.1e-05	24.1	0.4	3.1e-05	24.1	0.4	2.1	3	0	0	3	3	3	1	CDP-archaeol	synthase
MerC	PF03203.14	gi|297620557|ref|YP_003708694.1|	-	2.3	8.7	10.8	0.33	11.4	3.2	3.0	2	2	0	2	2	2	0	MerC	mercury	resistance	protein
Prenyltransf	PF01255.19	gi|297620558|ref|YP_003708695.1|	-	2.3e-70	236.6	0.0	2.7e-70	236.4	0.0	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Adenylsucc_synt	PF00709.21	gi|297620559|ref|YP_003708696.1|	-	4e-167	556.4	0.0	4.5e-167	556.2	0.0	1.0	1	0	0	1	1	1	1	Adenylosuccinate	synthetase
GTP_EFTU	PF00009.27	gi|297620560|ref|YP_003708697.1|	-	7.9e-53	178.9	0.2	1.2e-52	178.3	0.2	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
LepA_C	PF06421.12	gi|297620560|ref|YP_003708697.1|	-	1.3e-49	166.8	1.5	2.6e-49	165.8	1.5	1.5	1	0	0	1	1	1	1	GTP-binding	protein	LepA	C-terminus
EFG_C	PF00679.24	gi|297620560|ref|YP_003708697.1|	-	4.7e-20	71.4	0.0	1.2e-19	70.1	0.0	1.8	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.25	gi|297620560|ref|YP_003708697.1|	-	6.6e-12	45.7	1.1	1.7e-11	44.3	1.1	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
EFG_II	PF14492.6	gi|297620560|ref|YP_003708697.1|	-	1e-06	28.7	0.0	1.1e-05	25.5	0.0	2.3	1	1	0	1	1	1	1	Elongation	Factor	G,	domain	II
Ras	PF00071.22	gi|297620560|ref|YP_003708697.1|	-	7.5e-05	22.4	0.0	0.00013	21.6	0.0	1.4	1	0	0	1	1	1	1	Ras	family
MMR_HSR1	PF01926.23	gi|297620560|ref|YP_003708697.1|	-	0.00023	21.2	0.0	0.00056	20.0	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Arf	PF00025.21	gi|297620560|ref|YP_003708697.1|	-	0.0046	16.4	0.1	0.024	14.1	0.1	2.2	2	0	0	2	2	2	1	ADP-ribosylation	factor	family
MMR_HSR1_Xtn	PF16897.5	gi|297620560|ref|YP_003708697.1|	-	0.0089	16.0	0.0	0.042	13.9	0.0	2.1	2	0	0	2	2	2	1	C-terminal	region	of	MMR_HSR1	domain
SRPRB	PF09439.10	gi|297620560|ref|YP_003708697.1|	-	0.028	13.8	0.0	0.088	12.2	0.0	1.8	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
RF3_C	PF16658.5	gi|297620560|ref|YP_003708697.1|	-	0.042	13.7	0.0	0.081	12.7	0.0	1.5	1	0	0	1	1	1	0	Class	II	release	factor	RF3,	C-terminal	domain
TPK_catalytic	PF04263.16	gi|297620561|ref|YP_003708698.1|	-	1.3e-16	60.8	0.0	1.7e-16	60.3	0.0	1.2	1	0	0	1	1	1	1	Thiamin	pyrophosphokinase,	catalytic	domain
TPK_B1_binding	PF04265.14	gi|297620561|ref|YP_003708698.1|	-	1.8e-09	37.2	0.1	2.7e-09	36.6	0.1	1.3	1	0	0	1	1	1	1	Thiamin	pyrophosphokinase,	vitamin	B1	binding	domain
MAF_flag10	PF01973.18	gi|297620561|ref|YP_003708698.1|	-	0.0037	17.0	0.1	0.012	15.4	0.0	1.8	1	1	0	2	2	2	1	Protein	of	unknown	function	DUF115
FAD_binding_1	PF00667.20	gi|297620562|ref|YP_003708699.1|	-	7e-27	94.4	0.0	9.5e-25	87.5	0.0	2.5	2	1	0	2	2	2	1	FAD	binding	domain
NAD_binding_1	PF00175.21	gi|297620562|ref|YP_003708699.1|	-	2.9e-15	56.9	0.0	7.9e-15	55.4	0.0	1.7	2	0	0	2	2	2	1	Oxidoreductase	NAD-binding	domain
TerC	PF03741.16	gi|297620563|ref|YP_003708700.1|	-	5.3e-47	159.8	17.6	6.9e-47	159.5	17.6	1.1	1	0	0	1	1	1	1	Integral	membrane	protein	TerC	family
Corona_M	PF01635.18	gi|297620563|ref|YP_003708700.1|	-	0.057	12.7	2.0	0.11	11.8	2.0	1.6	1	0	0	1	1	1	0	Coronavirus	M	matrix/glycoprotein
YgbB	PF02542.16	gi|297620564|ref|YP_003708701.1|	-	1.9e-33	115.9	0.2	2.1e-33	115.8	0.2	1.0	1	0	0	1	1	1	1	YgbB	family
EPSP_synthase	PF00275.20	gi|297620565|ref|YP_003708702.1|	-	2.3e-59	201.2	0.0	2.6e-59	201.0	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
Radical_SAM	PF04055.21	gi|297620566|ref|YP_003708703.1|	-	5.2e-10	39.9	0.2	3.8e-09	37.1	0.2	2.1	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|297620566|ref|YP_003708703.1|	-	7e-08	32.8	0.0	2.2e-07	31.2	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|297620566|ref|YP_003708703.1|	-	1.1e-07	32.0	0.0	2.2e-07	31.0	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Abhydrolase_6	PF12697.7	gi|297620567|ref|YP_003708704.1|	-	1.5e-08	35.5	0.3	1.5e-08	35.5	0.3	2.0	2	0	0	2	2	2	1	Alpha/beta	hydrolase	family
Palm_thioest	PF02089.15	gi|297620567|ref|YP_003708704.1|	-	4.7e-08	33.2	0.1	1.9e-07	31.2	0.1	1.7	1	1	1	2	2	2	1	Palmitoyl	protein	thioesterase
Abhydrolase_1	PF00561.20	gi|297620567|ref|YP_003708704.1|	-	1.1e-07	31.8	0.6	2.8e-07	30.5	0.6	1.6	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Lipase_2	PF01674.18	gi|297620567|ref|YP_003708704.1|	-	2.3e-07	30.6	0.7	7.5e-07	28.9	0.7	1.8	1	1	0	1	1	1	1	Lipase	(class	2)
PGAP1	PF07819.13	gi|297620567|ref|YP_003708704.1|	-	4e-07	30.0	0.5	7.4e-07	29.1	0.1	1.6	2	0	0	2	2	2	1	PGAP1-like	protein
Hydrolase_4	PF12146.8	gi|297620567|ref|YP_003708704.1|	-	1e-06	28.2	0.2	3.4e-06	26.5	0.2	2.1	1	1	0	1	1	1	1	Serine	aminopeptidase,	S33
DUF676	PF05057.14	gi|297620567|ref|YP_003708704.1|	-	3.8e-06	26.6	0.8	9.1e-06	25.3	0.8	1.5	1	1	0	1	1	1	1	Putative	serine	esterase	(DUF676)
Lipase_3	PF01764.25	gi|297620567|ref|YP_003708704.1|	-	9.5e-06	25.5	0.0	1.9e-05	24.6	0.0	1.5	1	0	0	1	1	1	1	Lipase	(class	3)
DUF915	PF06028.11	gi|297620567|ref|YP_003708704.1|	-	6.2e-05	22.5	0.0	0.00022	20.7	0.0	1.6	1	1	0	2	2	2	1	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
LCAT	PF02450.15	gi|297620567|ref|YP_003708704.1|	-	7e-05	22.2	0.0	0.00011	21.5	0.0	1.2	1	0	0	1	1	1	1	Lecithin:cholesterol	acyltransferase
Thioesterase	PF00975.20	gi|297620567|ref|YP_003708704.1|	-	0.00069	19.8	0.0	0.0011	19.2	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	domain
Abhydrolase_5	PF12695.7	gi|297620567|ref|YP_003708704.1|	-	0.0037	17.0	0.0	0.007	16.1	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_8	PF06259.12	gi|297620567|ref|YP_003708704.1|	-	0.0047	16.6	0.0	0.0073	16.0	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase
DUF900	PF05990.12	gi|297620567|ref|YP_003708704.1|	-	0.0066	16.0	0.0	0.014	14.9	0.0	1.5	1	0	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF900)
Esterase	PF00756.20	gi|297620567|ref|YP_003708704.1|	-	0.012	15.3	0.0	0.019	14.6	0.0	1.2	1	0	0	1	1	1	0	Putative	esterase
Abhydrolase_2	PF02230.16	gi|297620567|ref|YP_003708704.1|	-	0.043	13.6	0.0	1.5	8.5	0.0	2.3	1	1	0	2	2	2	0	Phospholipase/Carboxylesterase
Ser_hydrolase	PF06821.13	gi|297620567|ref|YP_003708704.1|	-	0.074	12.9	0.1	0.16	11.8	0.1	1.5	1	0	0	1	1	1	0	Serine	hydrolase
Abhydro_lipase	PF04083.16	gi|297620567|ref|YP_003708704.1|	-	0.091	12.4	0.1	0.2	11.2	0.1	1.6	1	0	0	1	1	1	0	Partial	alpha/beta-hydrolase	lipase	region
VWA	PF00092.28	gi|297620568|ref|YP_003708705.1|	-	4.7e-14	53.0	0.1	6.6e-14	52.5	0.1	1.2	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_2	PF13519.6	gi|297620568|ref|YP_003708705.1|	-	1.7e-13	51.2	0.1	2.7e-13	50.5	0.1	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_2	PF13519.6	gi|297620569|ref|YP_003708706.1|	-	3.8e-15	56.5	0.0	6.3e-15	55.7	0.0	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.28	gi|297620569|ref|YP_003708706.1|	-	2.5e-11	44.1	0.0	3.7e-11	43.6	0.0	1.2	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.6	gi|297620569|ref|YP_003708706.1|	-	0.011	15.7	0.0	0.24	11.3	0.0	2.5	2	1	0	2	2	2	0	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.14	gi|297620569|ref|YP_003708706.1|	-	0.029	13.8	0.3	0.091	12.1	0.3	1.6	1	1	0	1	1	1	0	VWA	domain	containing	CoxE-like	protein
Copine	PF07002.16	gi|297620569|ref|YP_003708706.1|	-	0.081	12.4	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	Copine
TPR_1	PF00515.28	gi|297620570|ref|YP_003708707.1|	-	0.0047	16.7	4.7	7.8	6.5	0.0	4.8	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297620570|ref|YP_003708707.1|	-	0.069	13.8	6.1	1.4	9.7	0.3	5.0	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297620570|ref|YP_003708707.1|	-	0.081	13.4	0.0	0.081	13.4	0.0	5.1	6	2	1	7	7	7	0	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297620570|ref|YP_003708707.1|	-	0.21	11.8	19.2	6.4	7.2	1.1	6.8	7	0	0	7	7	7	0	Tetratricopeptide	repeat
Miga	PF10265.9	gi|297620570|ref|YP_003708707.1|	-	4.7	6.1	6.6	13	4.7	4.5	2.2	1	1	1	2	2	2	0	Mitoguardin
MIT	PF04212.18	gi|297620570|ref|YP_003708707.1|	-	6.7	6.9	11.9	15	5.7	0.1	4.8	5	0	0	5	5	5	0	MIT	(microtubule	interacting	and	transport)	domain
BatD	PF13584.6	gi|297620571|ref|YP_003708708.1|	-	1.4e-34	119.7	0.0	2.1e-34	119.2	0.0	1.2	1	0	0	1	1	1	1	Oxygen	tolerance
TPR_1	PF00515.28	gi|297620572|ref|YP_003708709.1|	-	1e-07	31.5	1.0	2.3e-07	30.3	1.0	1.7	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297620572|ref|YP_003708709.1|	-	3.1e-06	27.4	0.1	0.0076	16.5	0.0	1.6	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297620572|ref|YP_003708709.1|	-	3.6e-05	23.5	1.6	6.3e-05	22.8	0.5	2.0	2	0	0	2	2	2	1	Tetratricopeptide	repeat
SH3_3	PF08239.11	gi|297620572|ref|YP_003708709.1|	-	0.00077	19.7	0.1	0.0018	18.5	0.1	1.5	1	0	0	1	1	1	1	Bacterial	SH3	domain
TPR_8	PF13181.6	gi|297620572|ref|YP_003708709.1|	-	0.00089	19.3	1.4	0.0027	17.8	0.2	2.3	2	0	0	2	2	2	1	Tetratricopeptide	repeat
DUF4131	PF13567.6	gi|297620572|ref|YP_003708709.1|	-	0.0013	18.4	0.2	0.0054	16.4	0.3	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4131)
TPR_11	PF13414.6	gi|297620572|ref|YP_003708709.1|	-	0.0027	17.4	0.1	0.006	16.2	0.1	1.7	1	0	0	1	1	1	1	TPR	repeat
TPR_7	PF13176.6	gi|297620572|ref|YP_003708709.1|	-	0.018	15.0	0.0	0.042	13.9	0.0	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
SH3_1	PF00018.28	gi|297620572|ref|YP_003708709.1|	-	0.019	14.5	0.0	0.032	13.9	0.0	1.4	1	0	0	1	1	1	0	SH3	domain
GW	PF13457.6	gi|297620572|ref|YP_003708709.1|	-	0.11	13.1	0.0	0.23	12.1	0.0	1.6	1	0	0	1	1	1	0	GW	(Gly-Tryp)	dipeptide	domain
Pyrophosphatase	PF00719.19	gi|297620573|ref|YP_003708710.1|	-	4.3e-41	140.4	0.0	5e-41	140.2	0.0	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
RNR_Alpha	PF17975.1	gi|297620575|ref|YP_003708712.1|	-	1.1e-05	25.8	0.3	3.8e-05	24.1	0.3	1.9	1	0	0	1	1	1	1	Ribonucleotide	reductase	alpha	domain
Ribonuc_red_lgC	PF02867.15	gi|297620575|ref|YP_003708712.1|	-	0.00013	20.7	0.1	0.0091	14.6	0.1	3.1	1	1	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Kelch_1	PF01344.25	gi|297620575|ref|YP_003708712.1|	-	0.028	14.0	0.3	0.1	12.2	0.0	2.0	2	0	0	2	2	2	0	Kelch	motif
AMP-binding	PF00501.28	gi|297620576|ref|YP_003708713.1|	-	3.7e-107	358.6	0.0	4.5e-107	358.2	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|297620576|ref|YP_003708713.1|	-	7.4e-18	65.3	0.2	2.4e-17	63.7	0.2	1.9	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding_C_2	PF14535.6	gi|297620576|ref|YP_003708713.1|	-	0.12	12.7	0.1	0.26	11.6	0.1	1.6	1	0	0	1	1	1	0	AMP-binding	enzyme	C-terminal	domain
ScsC_N	PF18312.1	gi|297620576|ref|YP_003708713.1|	-	0.23	11.3	0.3	0.46	10.3	0.3	1.5	1	0	0	1	1	1	0	Copper	resistance	protein	ScsC	N-terminal	domain
Metallophos	PF00149.28	gi|297620578|ref|YP_003708715.1|	-	3.9e-17	63.4	0.1	4.7e-17	63.2	0.1	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|297620578|ref|YP_003708715.1|	-	1.6e-05	25.2	0.0	6.7e-05	23.1	0.0	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
OMPdecase	PF00215.24	gi|297620579|ref|YP_003708716.1|	-	7.7e-73	244.8	0.0	8.7e-73	244.6	0.0	1.0	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Pribosyltran	PF00156.27	gi|297620580|ref|YP_003708717.1|	-	4.8e-13	48.9	0.0	6.6e-13	48.5	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
DHO_dh	PF01180.21	gi|297620581|ref|YP_003708718.1|	-	2.2e-14	53.4	0.0	3.8e-12	46.0	0.0	2.0	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
Dus	PF01207.17	gi|297620581|ref|YP_003708718.1|	-	0.00066	18.9	0.0	0.0082	15.3	0.0	2.0	1	1	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
Amidohydro_1	PF01979.20	gi|297620582|ref|YP_003708719.1|	-	1.6e-22	80.3	0.0	2.4e-22	79.7	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|297620582|ref|YP_003708719.1|	-	0.01	15.4	0.1	0.23	10.9	0.0	2.2	2	0	0	2	2	2	0	Amidohydrolase	family
CDC37_N	PF03234.14	gi|297620582|ref|YP_003708719.1|	-	0.12	13.3	1.0	0.23	12.4	1.0	1.5	1	0	0	1	1	1	0	Cdc37	N	terminal	kinase	binding
GxGYxYP_N	PF16216.5	gi|297620582|ref|YP_003708719.1|	-	0.18	12.0	0.1	0.32	11.2	0.1	1.4	1	0	0	1	1	1	0	GxGYxY	sequence	motif	in	domain	of	unknown	function	N-terminal
PyrI	PF01948.18	gi|297620583|ref|YP_003708720.1|	-	8.1e-29	99.7	0.0	1.5e-28	98.9	0.0	1.4	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.15	gi|297620583|ref|YP_003708720.1|	-	1.3e-13	50.6	1.9	1.3e-13	50.6	1.9	1.8	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
HTH_19	PF12844.7	gi|297620583|ref|YP_003708720.1|	-	0.14	12.2	0.0	0.27	11.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
OTCace_N	PF02729.21	gi|297620584|ref|YP_003708721.1|	-	9.6e-47	158.7	0.0	1.7e-46	157.9	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.24	gi|297620584|ref|YP_003708721.1|	-	5.7e-29	101.2	0.0	7.6e-29	100.8	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
DUF2490	PF10677.9	gi|297620585|ref|YP_003708722.1|	-	2.7e-24	86.2	12.4	3.1e-24	86.0	12.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2490)
Ku_PK_bind	PF08785.11	gi|297620586|ref|YP_003708723.1|	-	0.00036	20.7	0.3	0.0027	17.9	0.2	2.4	1	1	0	2	2	2	1	Ku	C	terminal	domain	like
CPSase_L_D2	PF02786.17	gi|297620587|ref|YP_003708724.1|	-	4.2e-98	327.0	0.2	1.9e-72	243.2	0.0	2.2	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
GATase	PF00117.28	gi|297620587|ref|YP_003708724.1|	-	2.5e-48	164.4	0.0	1.3e-47	162.1	0.0	2.2	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
CPSase_sm_chain	PF00988.22	gi|297620587|ref|YP_003708724.1|	-	2e-43	147.3	0.0	5.4e-43	145.9	0.0	1.8	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
CPSase_L_D3	PF02787.19	gi|297620587|ref|YP_003708724.1|	-	4e-36	124.0	0.1	1.3e-35	122.4	0.1	2.0	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
ATP-grasp	PF02222.22	gi|297620587|ref|YP_003708724.1|	-	7.1e-16	58.2	0.2	3.6e-10	39.7	0.1	2.4	2	0	0	2	2	2	2	ATP-grasp	domain
MGS	PF02142.22	gi|297620587|ref|YP_003708724.1|	-	1.1e-15	57.5	0.4	2.9e-14	53.0	0.0	3.2	3	1	0	3	3	2	1	MGS-like	domain
Dala_Dala_lig_C	PF07478.13	gi|297620587|ref|YP_003708724.1|	-	1.3e-15	57.5	0.3	1.5e-08	34.5	0.1	2.4	2	0	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
Peptidase_C26	PF07722.13	gi|297620587|ref|YP_003708724.1|	-	6.1e-11	42.5	0.8	3e-09	37.0	0.8	2.7	1	1	0	1	1	1	1	Peptidase	C26
ATPgrasp_Ter	PF15632.6	gi|297620587|ref|YP_003708724.1|	-	1.1e-09	38.1	0.1	0.00022	21.0	0.0	2.6	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
DJ-1_PfpI	PF01965.24	gi|297620587|ref|YP_003708724.1|	-	0.00021	21.1	0.0	0.0046	16.8	0.0	2.4	2	0	0	2	2	2	1	DJ-1/PfpI	family
ATP-grasp_5	PF13549.6	gi|297620587|ref|YP_003708724.1|	-	0.0045	16.5	0.0	1.7	8.0	0.0	2.9	3	0	0	3	3	3	1	ATP-grasp	domain
QRPTase_C	PF01729.19	gi|297620587|ref|YP_003708724.1|	-	0.022	14.5	0.1	0.25	11.1	0.0	2.7	3	1	0	3	3	3	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
ATP-grasp_3	PF02655.14	gi|297620587|ref|YP_003708724.1|	-	0.024	14.7	1.3	0.11	12.5	0.1	2.7	3	0	0	3	3	3	0	ATP-grasp	domain
TrkA_N	PF02254.18	gi|297620587|ref|YP_003708724.1|	-	0.1	12.9	0.1	1.5	9.1	0.0	2.7	2	0	0	2	2	2	0	TrkA-N	domain
TPR_2	PF07719.17	gi|297620588|ref|YP_003708725.1|	-	5.3e-06	26.1	2.0	0.016	15.3	0.1	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297620588|ref|YP_003708725.1|	-	7.6e-05	22.4	1.7	0.36	10.7	0.2	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
Lactamase_B_2	PF12706.7	gi|297620588|ref|YP_003708725.1|	-	0.00096	18.7	0.0	0.0017	17.9	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
TPR_11	PF13414.6	gi|297620588|ref|YP_003708725.1|	-	0.037	13.7	0.1	2.9	7.6	0.0	2.5	2	0	0	2	2	2	0	TPR	repeat
DUF2200	PF09966.9	gi|297620588|ref|YP_003708725.1|	-	0.071	13.3	0.0	15	5.8	0.0	2.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2200)
GP88	PF17338.2	gi|297620588|ref|YP_003708725.1|	-	0.074	12.5	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	Gene	product	88
TPR_12	PF13424.6	gi|297620588|ref|YP_003708725.1|	-	0.16	12.2	0.4	0.82	10.0	0.4	2.0	1	1	0	1	1	1	0	Tetratricopeptide	repeat
DegT_DnrJ_EryC1	PF01041.17	gi|297620589|ref|YP_003708726.1|	-	1e-98	331.0	0.0	1.1e-98	330.8	0.0	1.0	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.21	gi|297620589|ref|YP_003708726.1|	-	0.00076	18.7	0.0	0.0012	18.1	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|297620589|ref|YP_003708726.1|	-	0.003	16.9	0.0	0.0048	16.2	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.19	gi|297620589|ref|YP_003708726.1|	-	0.0048	15.9	0.0	0.027	13.4	0.0	1.8	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|297620589|ref|YP_003708726.1|	-	0.12	10.9	0.1	0.18	10.3	0.1	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
TPR_2	PF07719.17	gi|297620591|ref|YP_003708728.1|	-	3.8e-14	51.6	0.7	3e-05	23.8	0.4	3.5	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297620591|ref|YP_003708728.1|	-	1.5e-12	47.8	7.5	1.3e-07	32.0	1.7	2.2	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297620591|ref|YP_003708728.1|	-	2.2e-11	43.1	1.3	5.3e-06	26.0	0.3	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|297620591|ref|YP_003708728.1|	-	7.5e-10	38.8	1.4	3.5e-05	24.3	0.6	3.0	1	1	2	3	3	3	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297620591|ref|YP_003708728.1|	-	1.5e-09	37.9	0.5	3.5e-08	33.6	0.3	2.1	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_12	PF13424.6	gi|297620591|ref|YP_003708728.1|	-	4.7e-09	36.4	2.4	2.1e-06	27.9	0.9	2.7	2	1	0	2	2	2	2	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|297620591|ref|YP_003708728.1|	-	7.4e-09	36.1	0.2	0.00012	22.6	0.1	2.2	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297620591|ref|YP_003708728.1|	-	8.6e-09	34.9	0.4	0.00029	20.8	0.1	3.3	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|297620591|ref|YP_003708728.1|	-	7.7e-08	32.4	0.2	1.8e-07	31.2	0.1	1.7	1	1	0	1	1	1	1	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|297620591|ref|YP_003708728.1|	-	6.3e-07	29.1	1.1	0.0096	15.8	0.1	3.5	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|297620591|ref|YP_003708728.1|	-	1.8e-06	27.9	3.8	0.034	14.5	0.0	3.3	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297620591|ref|YP_003708728.1|	-	2.4e-06	27.8	2.2	0.42	11.4	0.0	3.3	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|297620591|ref|YP_003708728.1|	-	3.5e-06	26.7	1.9	0.029	14.4	0.2	3.3	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|297620591|ref|YP_003708728.1|	-	7.3e-05	22.4	0.3	0.015	15.0	0.1	2.5	1	1	1	2	2	2	2	TPR	repeat
TPR_15	PF13429.6	gi|297620591|ref|YP_003708728.1|	-	0.00074	18.8	0.7	0.0015	17.8	0.7	1.5	1	1	0	1	1	1	1	Tetratricopeptide	repeat
TPR_4	PF07721.14	gi|297620591|ref|YP_003708728.1|	-	0.01	16.4	0.0	13	6.8	0.0	3.4	3	1	0	3	3	3	0	Tetratricopeptide	repeat
Coatomer_E	PF04733.14	gi|297620591|ref|YP_003708728.1|	-	0.016	14.6	0.2	0.024	14.0	0.2	1.4	1	1	0	1	1	1	0	Coatomer	epsilon	subunit
Fis1_TPR_C	PF14853.6	gi|297620591|ref|YP_003708728.1|	-	0.033	14.3	0.9	6.9	6.8	0.1	3.0	1	1	1	3	3	3	0	Fis1	C-terminal	tetratricopeptide	repeat
DUF5399	PF17377.2	gi|297620592|ref|YP_003708729.1|	-	7.3e-60	200.6	0.0	8.3e-60	200.5	0.0	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5399)
Methyltransf_5	PF01795.19	gi|297620593|ref|YP_003708730.1|	-	1.4e-109	366.3	0.0	1.6e-109	366.2	0.0	1.0	1	0	0	1	1	1	1	MraW	methylase	family
Methyltransf_31	PF13847.6	gi|297620593|ref|YP_003708730.1|	-	3.8e-06	26.8	0.0	6.7e-05	22.7	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297620593|ref|YP_003708730.1|	-	3.3e-05	24.5	0.0	0.00012	22.7	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297620593|ref|YP_003708730.1|	-	0.00063	20.4	0.0	0.019	15.7	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.14	gi|297620593|ref|YP_003708730.1|	-	0.0035	16.9	0.0	0.7	9.4	0.0	2.2	2	0	0	2	2	2	2	Methyltransferase	small	domain
Lipid_DES	PF08557.10	gi|297620593|ref|YP_003708730.1|	-	0.022	14.3	0.0	0.038	13.5	0.0	1.4	1	0	0	1	1	1	0	Sphingolipid	Delta4-desaturase	(DES)
Methyltransf_11	PF08241.12	gi|297620593|ref|YP_003708730.1|	-	0.05	14.2	0.0	0.39	11.4	0.0	2.1	2	0	0	2	2	2	0	Methyltransferase	domain
Methyltransf_3	PF01596.17	gi|297620593|ref|YP_003708730.1|	-	0.15	11.2	0.0	0.22	10.7	0.0	1.2	1	0	0	1	1	1	0	O-methyltransferase
DivIC	PF04977.15	gi|297620594|ref|YP_003708731.1|	-	0.0001	22.0	0.0	0.00013	21.6	0.0	1.2	1	0	0	1	1	1	1	Septum	formation	initiator
CCDC92	PF14916.6	gi|297620594|ref|YP_003708731.1|	-	0.03	14.1	0.1	0.046	13.5	0.1	1.3	1	0	0	1	1	1	0	Coiled-coil	domain	of	unknown	function
bZIP_2	PF07716.15	gi|297620594|ref|YP_003708731.1|	-	0.041	14.0	0.4	0.062	13.4	0.4	1.3	1	0	0	1	1	1	0	Basic	region	leucine	zipper
Transpeptidase	PF00905.22	gi|297620595|ref|YP_003708732.1|	-	8.7e-46	156.5	0.0	1.4e-45	155.8	0.0	1.3	1	0	0	1	1	1	1	Penicillin	binding	protein	transpeptidase	domain
PBP_dimer	PF03717.15	gi|297620595|ref|YP_003708732.1|	-	5.2e-05	23.7	0.0	0.00017	22.0	0.0	1.9	1	1	0	1	1	1	1	Penicillin-binding	Protein	dimerisation	domain
Mur_ligase_M	PF08245.12	gi|297620596|ref|YP_003708733.1|	-	3e-51	174.1	0.0	6.7e-51	173.0	0.0	1.6	2	0	0	2	2	2	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.21	gi|297620596|ref|YP_003708733.1|	-	7.4e-22	77.4	0.0	2.4e-21	75.8	0.0	1.9	2	0	0	2	2	2	1	Mur	ligase	family,	glutamate	ligase	domain
Mur_ligase	PF01225.25	gi|297620596|ref|YP_003708733.1|	-	6.7e-09	36.0	0.0	2.1e-08	34.3	0.0	1.9	1	0	0	1	1	1	1	Mur	ligase	family,	catalytic	domain
Amidase_3	PF01520.18	gi|297620597|ref|YP_003708734.1|	-	2.5e-51	174.2	0.0	3e-51	174.0	0.0	1.0	1	0	0	1	1	1	1	N-acetylmuramoyl-L-alanine	amidase
6PGD	PF00393.19	gi|297620598|ref|YP_003708735.1|	-	6e-132	439.4	0.0	7.5e-132	439.1	0.0	1.1	1	0	0	1	1	1	1	6-phosphogluconate	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.15	gi|297620598|ref|YP_003708735.1|	-	4.6e-50	169.9	0.0	6.8e-50	169.3	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Shikimate_DH	PF01488.20	gi|297620598|ref|YP_003708735.1|	-	0.0024	17.9	0.0	0.0057	16.7	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_11	PF14833.6	gi|297620598|ref|YP_003708735.1|	-	0.11	12.8	0.4	0.7	10.2	0.0	2.5	4	0	0	4	4	4	0	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
Peptidase_M50	PF02163.22	gi|297620599|ref|YP_003708736.1|	-	3.1e-58	197.0	0.0	4.7e-58	196.4	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M50
PDZ_6	PF17820.1	gi|297620599|ref|YP_003708736.1|	-	2.9e-13	49.4	0.1	8.5e-05	22.3	0.0	3.5	3	0	0	3	3	3	3	PDZ	domain
Tricorn_PDZ	PF14685.6	gi|297620599|ref|YP_003708736.1|	-	3.8e-08	33.2	0.0	0.0013	18.7	0.0	3.0	3	0	0	3	3	3	2	Tricorn	protease	PDZ	domain
PDZ_2	PF13180.6	gi|297620599|ref|YP_003708736.1|	-	5.3e-08	33.1	0.0	0.0045	17.3	0.0	3.3	3	0	0	3	3	3	2	PDZ	domain
PDZ	PF00595.24	gi|297620599|ref|YP_003708736.1|	-	0.00025	21.4	0.0	0.33	11.3	0.0	2.4	2	0	0	2	2	2	2	PDZ	domain
CW_7	PF08230.11	gi|297620601|ref|YP_003708738.1|	-	0.014	15.2	0.3	0.047	13.4	0.1	2.0	2	0	0	2	2	2	0	CW_7	repeat
Nairovirus_M	PF07948.11	gi|297620601|ref|YP_003708738.1|	-	0.07	11.3	0.1	0.083	11.1	0.1	1.0	1	0	0	1	1	1	0	Nairovirus	M	polyprotein-like
UBA_6	PF18039.1	gi|297620601|ref|YP_003708738.1|	-	0.29	11.1	1.0	9.7	6.2	0.0	3.2	2	1	1	3	3	3	0	UBA-like	domain
Peptidase_M4_C	PF02868.15	gi|297620602|ref|YP_003708739.1|	-	9.3e-44	149.3	0.2	1.5e-43	148.6	0.2	1.3	1	0	0	1	1	1	1	Thermolysin	metallopeptidase,	alpha-helical	domain
Peptidase_M4	PF01447.18	gi|297620602|ref|YP_003708739.1|	-	4.4e-30	105.1	0.6	1.1e-29	103.9	0.6	1.6	1	0	0	1	1	1	1	Thermolysin	metallopeptidase,	catalytic	domain
PLN_propep	PF16485.5	gi|297620602|ref|YP_003708739.1|	-	0.00056	19.6	0.0	0.0016	18.1	0.0	1.8	1	0	0	1	1	1	1	Protealysin	propeptide
Peptidase_M36	PF02128.15	gi|297620602|ref|YP_003708739.1|	-	0.0031	16.7	0.0	0.0041	16.3	0.0	1.2	1	0	0	1	1	1	1	Fungalysin	metallopeptidase	(M36)
ABC_membrane	PF00664.23	gi|297620603|ref|YP_003708740.1|	-	5e-37	128.0	17.7	6.3e-37	127.7	17.7	1.1	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.27	gi|297620603|ref|YP_003708740.1|	-	1.1e-27	97.3	0.0	1.9e-27	96.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|297620603|ref|YP_003708740.1|	-	6.1e-06	25.8	0.1	6.1e-06	25.8	0.1	2.4	3	0	0	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|297620603|ref|YP_003708740.1|	-	0.00012	22.1	0.8	0.22	11.3	0.2	2.4	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
NB-ARC	PF00931.22	gi|297620603|ref|YP_003708740.1|	-	0.0028	16.9	0.7	0.061	12.5	0.7	2.3	1	1	0	1	1	1	1	NB-ARC	domain
AAA_18	PF13238.6	gi|297620603|ref|YP_003708740.1|	-	0.0041	17.7	0.0	0.01	16.4	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|297620603|ref|YP_003708740.1|	-	0.0096	16.2	0.1	0.063	13.5	0.0	2.3	3	0	0	3	3	3	1	AAA	domain
MeaB	PF03308.16	gi|297620603|ref|YP_003708740.1|	-	0.015	14.3	0.0	1.5	7.7	0.0	2.2	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_29	PF13555.6	gi|297620603|ref|YP_003708740.1|	-	0.039	13.7	0.1	0.1	12.3	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
dNK	PF01712.19	gi|297620603|ref|YP_003708740.1|	-	0.045	13.6	0.0	0.098	12.5	0.0	1.6	1	0	0	1	1	1	0	Deoxynucleoside	kinase
AAA	PF00004.29	gi|297620603|ref|YP_003708740.1|	-	0.082	13.3	0.4	0.59	10.6	0.1	2.4	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.6	gi|297620603|ref|YP_003708740.1|	-	0.086	13.3	0.4	0.3	11.6	0.2	1.9	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.23	gi|297620603|ref|YP_003708740.1|	-	0.13	12.3	0.1	0.41	10.7	0.1	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
ABC_membrane	PF00664.23	gi|297620604|ref|YP_003708741.1|	-	3.3e-40	138.5	12.6	3.3e-40	138.5	12.6	1.4	2	0	0	2	2	2	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.27	gi|297620604|ref|YP_003708741.1|	-	1.3e-31	110.0	0.2	2.6e-31	108.9	0.0	1.6	2	0	0	2	2	1	1	ABC	transporter
SMC_N	PF02463.19	gi|297620604|ref|YP_003708741.1|	-	4.6e-06	26.2	0.0	1.4e-05	24.6	0.0	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|297620604|ref|YP_003708741.1|	-	0.00017	21.5	0.0	0.0005	20.0	0.0	1.8	2	0	0	2	2	2	1	RsgA	GTPase
AAA_16	PF13191.6	gi|297620604|ref|YP_003708741.1|	-	0.0014	19.0	0.0	0.0029	18.0	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|297620604|ref|YP_003708741.1|	-	0.0037	17.5	0.6	0.043	14.1	0.6	2.4	1	1	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.23	gi|297620604|ref|YP_003708741.1|	-	0.012	15.7	0.1	0.045	13.8	0.0	2.0	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_23	PF13476.6	gi|297620604|ref|YP_003708741.1|	-	0.012	16.1	0.0	0.034	14.6	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
T2SSE	PF00437.20	gi|297620604|ref|YP_003708741.1|	-	0.021	13.9	0.2	0.044	12.8	0.0	1.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Zeta_toxin	PF06414.12	gi|297620604|ref|YP_003708741.1|	-	0.047	13.0	0.1	0.43	9.8	0.0	2.2	2	0	0	2	2	2	0	Zeta	toxin
AAA_7	PF12775.7	gi|297620604|ref|YP_003708741.1|	-	0.057	12.9	0.0	0.12	11.8	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_30	PF13604.6	gi|297620604|ref|YP_003708741.1|	-	0.088	12.5	0.9	0.65	9.7	0.0	2.5	3	0	0	3	3	3	0	AAA	domain
AAA	PF00004.29	gi|297620604|ref|YP_003708741.1|	-	0.1	13.0	0.4	1.5	9.3	0.4	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.6	gi|297620604|ref|YP_003708741.1|	-	0.11	12.2	0.1	0.29	10.9	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DEAD	PF00270.29	gi|297620604|ref|YP_003708741.1|	-	0.23	11.2	0.9	1.6	8.5	0.8	2.2	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
HicA_toxin	PF07927.12	gi|297620605|ref|YP_003708742.1|	-	5.1e-12	45.6	0.1	1.9e-11	43.8	0.1	2.0	1	0	0	1	1	1	1	HicA	toxin	of	bacterial	toxin-antitoxin,
XRN_N	PF03159.18	gi|297620605|ref|YP_003708742.1|	-	0.004	16.6	3.8	0.0095	15.4	3.8	1.6	1	0	0	1	1	1	1	XRN	5'-3'	exonuclease	N-terminus
DUF5617	PF18493.1	gi|297620605|ref|YP_003708742.1|	-	0.044	13.9	0.6	0.22	11.6	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5617)
DnaB	PF00772.21	gi|297620605|ref|YP_003708742.1|	-	0.058	13.5	0.0	0.48	10.5	0.0	2.6	2	0	0	2	2	2	0	DnaB-like	helicase	N	terminal	domain
Sulfotransfer_4	PF17784.1	gi|297620605|ref|YP_003708742.1|	-	0.091	12.6	2.2	8.8	6.1	0.0	3.5	3	1	1	4	4	4	0	Sulfotransferase	domain
DUF2052	PF09747.9	gi|297620605|ref|YP_003708742.1|	-	1.7	8.7	5.7	3.6	7.7	5.7	1.5	1	0	0	1	1	1	0	Coiled-coil	domain	containing	protein	(DUF2052)
UbiA	PF01040.18	gi|297620606|ref|YP_003708743.1|	-	4.4e-09	36.0	15.4	6.9e-09	35.4	15.4	1.3	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
QueF_N	PF14819.6	gi|297620607|ref|YP_003708744.1|	-	6.6e-46	155.2	0.0	1.2e-45	154.3	0.0	1.4	1	0	0	1	1	1	1	Nitrile	reductase,	7-cyano-7-deazaguanine-reductase	N-term
QueF	PF14489.6	gi|297620607|ref|YP_003708744.1|	-	3.8e-31	107.1	0.0	2e-23	82.3	0.0	2.3	2	0	0	2	2	2	2	QueF-like	protein
UPF0225	PF17775.1	gi|297620609|ref|YP_003708746.1|	-	9.4e-10	39.2	0.1	1.3e-09	38.8	0.1	1.3	1	0	0	1	1	1	1	UPF0225	domain
UPF0225	PF17775.1	gi|297620610|ref|YP_003708747.1|	-	4.7e-14	53.0	0.1	5.5e-14	52.8	0.1	1.1	1	0	0	1	1	1	1	UPF0225	domain
SEC-C	PF02810.15	gi|297620610|ref|YP_003708747.1|	-	3.3e-05	23.7	9.3	5.5e-05	23.0	9.3	1.4	1	0	0	1	1	1	1	SEC-C	motif
DUF4440	PF14534.6	gi|297620611|ref|YP_003708748.1|	-	4.8e-09	36.6	0.0	5.9e-09	36.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4440)
CaMKII_AD	PF08332.10	gi|297620611|ref|YP_003708748.1|	-	0.014	15.5	0.0	0.02	15.0	0.0	1.2	1	0	0	1	1	1	0	Calcium/calmodulin	dependent	protein	kinase	II	association	domain
SnoaL_2	PF12680.7	gi|297620611|ref|YP_003708748.1|	-	0.049	14.3	0.0	0.073	13.7	0.0	1.3	1	0	0	1	1	1	0	SnoaL-like	domain
DUF3989	PF13150.6	gi|297620611|ref|YP_003708748.1|	-	0.14	11.9	0.0	0.33	10.7	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3989)
Chitin_synth_1	PF01644.17	gi|297620612|ref|YP_003708749.1|	-	0.059	13.3	0.1	1.3	9.0	0.0	2.0	1	1	1	2	2	2	0	Chitin	synthase
GvpG	PF05120.12	gi|297620612|ref|YP_003708749.1|	-	5.4	7.1	7.4	0.57	10.2	1.5	2.0	2	0	0	2	2	2	0	Gas	vesicle	protein	G
Peptidase_M15_3	PF08291.11	gi|297620613|ref|YP_003708750.1|	-	0.00011	22.3	0.0	0.00017	21.7	0.0	1.3	1	0	0	1	1	1	1	Peptidase	M15
Peptidase_M15_2	PF05951.13	gi|297620613|ref|YP_003708750.1|	-	0.028	14.1	0.0	0.046	13.4	0.0	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF882)
HAD_2	PF13419.6	gi|297620614|ref|YP_003708751.1|	-	8.6e-22	78.1	0.0	1e-21	77.8	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|297620614|ref|YP_003708751.1|	-	2.7e-11	44.2	0.0	1.7e-10	41.6	0.0	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|297620614|ref|YP_003708751.1|	-	0.00077	19.9	0.0	0.00097	19.6	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.6	gi|297620614|ref|YP_003708751.1|	-	0.092	12.9	0.0	6.1	7.0	0.0	2.3	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
PseudoU_synth_1	PF01416.20	gi|297620615|ref|YP_003708752.1|	-	3.9e-40	136.7	0.0	1.7e-26	92.8	0.0	2.1	2	0	0	2	2	2	2	tRNA	pseudouridine	synthase
DUF2344	PF10105.9	gi|297620615|ref|YP_003708752.1|	-	0.013	15.3	0.0	0.021	14.7	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2344)
Metallophos	PF00149.28	gi|297620617|ref|YP_003708754.1|	-	4.5e-11	43.6	0.0	6.4e-11	43.1	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|297620617|ref|YP_003708754.1|	-	3.1e-06	27.5	0.1	4.6e-05	23.7	0.1	2.1	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.6	gi|297620617|ref|YP_003708754.1|	-	0.081	12.2	0.0	0.12	11.7	0.0	1.2	1	0	0	1	1	1	0	Metallophosphoesterase,	calcineurin	superfamily
SWIB	PF02201.18	gi|297620618|ref|YP_003708755.1|	-	7.7e-29	99.4	0.0	8.9e-29	99.2	0.0	1.1	1	0	0	1	1	1	1	SWIB/MDM2	domain
UDPGP	PF01704.18	gi|297620619|ref|YP_003708756.1|	-	3.7e-08	32.4	0.0	6e-08	31.7	0.0	1.2	1	0	0	1	1	1	1	UTP--glucose-1-phosphate	uridylyltransferase
Branch_AA_trans	PF05525.13	gi|297620622|ref|YP_003708759.1|	-	1.2e-59	202.4	31.5	1.4e-59	202.1	31.5	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	protein
BRI3BP	PF14965.6	gi|297620622|ref|YP_003708759.1|	-	5	6.6	9.1	1.7	8.2	2.3	3.1	2	1	0	2	2	2	0	Negative	regulator	of	p53/TP53
PCRF	PF03462.18	gi|297620623|ref|YP_003708760.1|	-	5.2e-54	183.1	0.1	1.2e-53	181.9	0.0	1.6	2	0	0	2	2	2	1	PCRF	domain
RF-1	PF00472.20	gi|297620623|ref|YP_003708760.1|	-	1.9e-40	137.4	0.0	3.7e-40	136.5	0.0	1.5	1	0	0	1	1	1	1	RF-1	domain
Acetyltransf_1	PF00583.25	gi|297620624|ref|YP_003708761.1|	-	9e-12	45.3	0.0	1.1e-11	45.0	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|297620624|ref|YP_003708761.1|	-	4.7e-10	39.8	0.1	6.6e-10	39.3	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|297620624|ref|YP_003708761.1|	-	8.3e-10	38.7	0.0	1.1e-09	38.2	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|297620624|ref|YP_003708761.1|	-	1.2e-08	35.7	0.0	1.5e-08	35.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|297620624|ref|YP_003708761.1|	-	1e-05	25.4	0.0	1.6e-05	24.8	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_8	PF13523.6	gi|297620624|ref|YP_003708761.1|	-	3.4e-05	23.5	0.0	4.9e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|297620624|ref|YP_003708761.1|	-	0.00033	20.8	0.0	0.00044	20.4	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
SprT-like	PF10263.9	gi|297620625|ref|YP_003708762.1|	-	0.0055	16.5	1.0	0.016	15.1	1.0	1.8	1	1	0	1	1	1	1	SprT-like	family
Transcrip_reg	PF01709.20	gi|297620626|ref|YP_003708763.1|	-	2.4e-84	282.5	2.2	2.7e-84	282.4	2.2	1.0	1	0	0	1	1	1	1	Transcriptional	regulator
Chorismate_bind	PF00425.18	gi|297620627|ref|YP_003708764.1|	-	1.4e-88	296.9	0.0	1.6e-88	296.6	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.13	gi|297620627|ref|YP_003708764.1|	-	0.021	15.0	0.0	0.47	10.7	0.0	2.7	3	0	0	3	3	3	0	Anthranilate	synthase	component	I,	N	terminal	region
Titin_Ig-rpts	PF06582.12	gi|297620627|ref|YP_003708764.1|	-	0.13	12.2	1.0	4.8	7.2	0.0	2.8	3	0	0	3	3	3	0	Titin	repeat
LMBR1	PF04791.16	gi|297620628|ref|YP_003708765.1|	-	0.00022	20.3	7.1	0.002	17.1	0.1	2.1	1	1	1	2	2	2	1	LMBR1-like	membrane	protein
BLOC1_2	PF10046.9	gi|297620628|ref|YP_003708765.1|	-	0.00047	20.4	21.5	0.13	12.6	6.5	4.2	2	1	2	4	4	4	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DASH_Dam1	PF08653.10	gi|297620628|ref|YP_003708765.1|	-	0.011	15.5	2.3	0.62	9.9	0.0	4.0	5	1	1	6	6	4	0	DASH	complex	subunit	Dam1
YabA	PF06156.13	gi|297620628|ref|YP_003708765.1|	-	0.017	15.7	19.1	0.59	10.8	4.9	3.3	2	1	1	3	3	3	0	Initiation	control	protein	YabA
DHR10	PF18595.1	gi|297620628|ref|YP_003708765.1|	-	0.03	14.4	25.8	3.1	7.9	9.4	3.3	1	1	2	3	3	3	0	Designed	helical	repeat	protein	10	domain
TMP_2	PF06791.13	gi|297620628|ref|YP_003708765.1|	-	0.042	13.5	5.8	0.58	9.8	0.1	3.1	3	0	0	3	3	3	0	Prophage	tail	length	tape	measure	protein
TMF_TATA_bd	PF12325.8	gi|297620628|ref|YP_003708765.1|	-	0.066	13.4	27.1	0.24	11.6	7.9	3.1	1	1	1	3	3	3	0	TATA	element	modulatory	factor	1	TATA	binding
DUF812	PF05667.11	gi|297620628|ref|YP_003708765.1|	-	0.066	12.1	25.9	0.23	10.3	15.5	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
COG2	PF06148.11	gi|297620628|ref|YP_003708765.1|	-	0.075	13.1	17.0	0.2	11.7	6.9	2.7	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
RPW8	PF05659.11	gi|297620628|ref|YP_003708765.1|	-	0.09	12.5	16.7	0.058	13.1	4.6	3.3	2	1	1	3	3	3	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
DUF1664	PF07889.12	gi|297620628|ref|YP_003708765.1|	-	0.11	12.5	16.0	0.34	11.0	2.1	3.5	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1664)
HemX	PF04375.14	gi|297620628|ref|YP_003708765.1|	-	0.17	11.1	17.5	0.025	13.9	1.2	2.9	1	1	2	3	3	3	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
GAS	PF13851.6	gi|297620628|ref|YP_003708765.1|	-	0.22	10.9	30.9	0.019	14.4	12.7	2.4	1	1	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Baculo_PEP_C	PF04513.12	gi|297620628|ref|YP_003708765.1|	-	0.23	11.5	4.6	2.6	8.1	0.3	3.0	1	1	1	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
T3SSipB	PF16535.5	gi|297620628|ref|YP_003708765.1|	-	0.25	11.8	13.4	0.29	11.6	4.3	2.5	2	0	0	2	2	2	0	Type	III	cell	invasion	protein	SipB
Sec34	PF04136.15	gi|297620628|ref|YP_003708765.1|	-	0.28	11.1	17.4	0.2	11.5	2.4	3.7	1	1	1	3	3	3	0	Sec34-like	family
MCPsignal	PF00015.21	gi|297620628|ref|YP_003708765.1|	-	0.28	11.0	13.0	0.065	13.0	0.6	3.2	3	1	0	3	3	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Syntaxin-6_N	PF09177.11	gi|297620628|ref|YP_003708765.1|	-	0.3	11.6	14.1	1.8	9.2	2.3	3.4	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
Coat_F	PF07875.12	gi|297620628|ref|YP_003708765.1|	-	0.33	11.2	2.2	0.89	9.8	0.1	2.4	2	0	0	2	2	2	0	Coat	F	domain
HrpB7	PF09486.10	gi|297620628|ref|YP_003708765.1|	-	0.35	11.3	10.7	0.24	11.8	0.2	3.2	3	1	0	3	3	3	0	Bacterial	type	III	secretion	protein	(HrpB7)
FUSC_2	PF13515.6	gi|297620628|ref|YP_003708765.1|	-	0.47	10.6	6.5	0.73	10.0	6.5	1.2	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein-like
Med30	PF11315.8	gi|297620628|ref|YP_003708765.1|	-	0.52	10.5	17.1	0.054	13.7	5.4	3.0	1	1	0	2	2	2	0	Mediator	complex	subunit	30
ASL_C	PF08328.11	gi|297620628|ref|YP_003708765.1|	-	0.64	10.1	12.9	0.66	10.1	2.3	3.2	2	2	1	3	3	3	0	Adenylosuccinate	lyase	C-terminal
GLE1	PF07817.13	gi|297620628|ref|YP_003708765.1|	-	0.65	9.2	7.3	0.14	11.3	1.5	2.4	2	1	0	2	2	2	0	GLE1-like	protein
Laminin_II	PF06009.12	gi|297620628|ref|YP_003708765.1|	-	0.68	9.9	16.6	1.9	8.5	1.9	3.8	1	1	3	4	4	4	0	Laminin	Domain	II
ATG16	PF08614.11	gi|297620628|ref|YP_003708765.1|	-	0.71	10.1	21.8	0.054	13.7	9.9	2.6	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
Fez1	PF06818.15	gi|297620628|ref|YP_003708765.1|	-	0.73	10.2	23.5	5.6	7.4	21.7	2.5	1	1	1	2	2	2	0	Fez1
Katanin_con80	PF13925.6	gi|297620628|ref|YP_003708765.1|	-	0.74	9.8	9.5	0.68	9.9	0.5	3.2	3	1	1	4	4	3	0	con80	domain	of	Katanin
FlaC_arch	PF05377.11	gi|297620628|ref|YP_003708765.1|	-	1.4	9.3	15.8	14	6.1	0.2	5.4	4	1	1	5	5	5	0	Flagella	accessory	protein	C	(FlaC)
TPR_MLP1_2	PF07926.12	gi|297620628|ref|YP_003708765.1|	-	1.7	8.7	26.9	0.9	9.6	1.5	3.8	1	1	2	3	3	3	0	TPR/MLP1/MLP2-like	protein
V_ATPase_I	PF01496.19	gi|297620628|ref|YP_003708765.1|	-	1.8	6.4	18.3	0.2	9.5	6.0	2.1	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
Med9	PF07544.13	gi|297620628|ref|YP_003708765.1|	-	1.9	8.6	15.7	0.053	13.6	2.7	3.2	2	2	2	4	4	4	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
KxDL	PF10241.9	gi|297620628|ref|YP_003708765.1|	-	2.1	8.7	0.0	2.1	8.7	0.0	4.7	1	1	4	5	5	5	0	Uncharacterized	conserved	protein
MADF_DNA_bdg	PF10545.9	gi|297620628|ref|YP_003708765.1|	-	3.8	7.9	7.9	1.2	9.5	1.8	2.9	2	1	1	3	3	3	0	Alcohol	dehydrogenase	transcription	factor	Myb/SANT-like
CREPT	PF16566.5	gi|297620628|ref|YP_003708765.1|	-	4.1	7.6	21.8	0.043	14.0	1.5	3.4	1	1	2	3	3	2	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
Uds1	PF15456.6	gi|297620628|ref|YP_003708765.1|	-	4.7	7.4	19.4	0.79	9.9	3.5	3.3	1	1	2	3	3	3	0	Up-regulated	During	Septation
Glutaredoxin2_C	PF04399.13	gi|297620628|ref|YP_003708765.1|	-	5.8	6.8	9.0	23	4.8	0.1	3.8	1	1	1	4	4	4	0	Glutaredoxin	2,	C	terminal	domain
TACC_C	PF05010.14	gi|297620628|ref|YP_003708765.1|	-	6	6.6	28.3	8.6	6.1	11.0	2.7	1	1	2	3	3	3	0	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
DUF948	PF06103.11	gi|297620628|ref|YP_003708765.1|	-	6.4	7.1	19.7	10	6.4	1.9	4.7	1	1	2	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
HAUS-augmin3	PF14932.6	gi|297620628|ref|YP_003708765.1|	-	7.6	6.0	23.8	1.6	8.2	3.6	3.1	1	1	2	3	3	3	0	HAUS	augmin-like	complex	subunit	3
Tweety	PF04906.13	gi|297620628|ref|YP_003708765.1|	-	8.2	5.0	6.4	4.1	6.0	0.2	2.3	1	1	0	2	2	2	0	Tweety
DUF2203	PF09969.9	gi|297620628|ref|YP_003708765.1|	-	8.4	7.1	18.7	1.9	9.2	2.4	3.5	1	1	1	2	2	1	0	Uncharacterized	conserved	protein	(DUF2203)
MbeD_MobD	PF04899.12	gi|297620628|ref|YP_003708765.1|	-	9.2	6.5	11.9	15	5.8	0.1	4.5	3	2	2	5	5	5	0	MbeD/MobD	like
Lipoprotein_20	PF13942.6	gi|297620628|ref|YP_003708765.1|	-	9.5	6.1	18.6	0.13	12.2	3.0	2.6	1	1	2	3	3	3	0	YfhG	lipoprotein
COG5	PF10392.9	gi|297620628|ref|YP_003708765.1|	-	9.6	6.4	8.7	2.5	8.3	0.6	3.0	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
Jnk-SapK_ap_N	PF09744.9	gi|297620629|ref|YP_003708766.1|	-	0.00077	19.7	11.7	0.012	15.9	5.4	2.3	1	1	0	2	2	2	2	JNK_SAPK-associated	protein-1
Mod_r	PF07200.13	gi|297620629|ref|YP_003708766.1|	-	0.00082	19.5	5.8	0.00082	19.5	5.8	2.5	1	1	1	2	2	2	1	Modifier	of	rudimentary	(Mod(r))	protein
DUF1664	PF07889.12	gi|297620629|ref|YP_003708766.1|	-	0.007	16.4	5.6	1.4	9.0	0.9	3.1	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF1664)
DUF4407	PF14362.6	gi|297620629|ref|YP_003708766.1|	-	0.016	14.5	1.6	0.029	13.7	1.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
FlaC_arch	PF05377.11	gi|297620629|ref|YP_003708766.1|	-	0.017	15.5	12.4	2.9	8.4	0.1	5.0	2	2	2	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
CALCOCO1	PF07888.11	gi|297620629|ref|YP_003708766.1|	-	0.02	13.8	10.7	0.026	13.4	10.7	1.2	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
RasGAP_C	PF03836.15	gi|297620629|ref|YP_003708766.1|	-	0.025	14.7	1.6	0.25	11.5	0.1	2.3	1	1	1	2	2	2	0	RasGAP	C-terminus
Occludin_ELL	PF07303.13	gi|297620629|ref|YP_003708766.1|	-	0.029	15.1	11.0	0.045	14.5	7.8	2.5	1	1	2	3	3	3	0	Occludin	homology	domain
IIGP	PF05049.13	gi|297620629|ref|YP_003708766.1|	-	0.032	13.3	2.4	0.92	8.5	0.0	2.1	1	1	1	2	2	2	0	Interferon-inducible	GTPase	(IIGP)
TPR_MLP1_2	PF07926.12	gi|297620629|ref|YP_003708766.1|	-	0.05	13.7	14.2	0.82	9.7	4.9	3.2	1	1	2	3	3	3	0	TPR/MLP1/MLP2-like	protein
MbeD_MobD	PF04899.12	gi|297620629|ref|YP_003708766.1|	-	0.067	13.3	2.8	33	4.7	0.2	4.0	2	1	1	3	3	3	0	MbeD/MobD	like
GAS	PF13851.6	gi|297620629|ref|YP_003708766.1|	-	0.096	12.0	15.6	1.5	8.2	9.7	2.3	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Prominin	PF05478.11	gi|297620629|ref|YP_003708766.1|	-	0.13	10.2	2.6	0.19	9.6	1.1	1.8	1	1	0	1	1	1	0	Prominin
Rsa3	PF14615.6	gi|297620629|ref|YP_003708766.1|	-	0.13	11.8	5.5	4.8	6.8	0.2	3.5	4	0	0	4	4	3	0	Ribosome-assembly	protein	3
Syntaxin-6_N	PF09177.11	gi|297620629|ref|YP_003708766.1|	-	0.13	12.8	8.8	0.73	10.4	0.4	3.4	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
DUF3450	PF11932.8	gi|297620629|ref|YP_003708766.1|	-	0.14	11.4	7.1	1.6	8.0	1.5	2.4	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3450)
Spc7	PF08317.11	gi|297620629|ref|YP_003708766.1|	-	0.19	10.6	15.0	1.2	8.0	8.9	2.4	1	1	1	2	2	2	0	Spc7	kinetochore	protein
Snapin_Pallidin	PF14712.6	gi|297620629|ref|YP_003708766.1|	-	0.23	11.9	9.0	2	8.9	1.8	3.7	2	1	2	4	4	4	0	Snapin/Pallidin
Rootletin	PF15035.6	gi|297620629|ref|YP_003708766.1|	-	0.24	11.4	7.5	0.59	10.1	7.5	1.7	1	1	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
TACC_C	PF05010.14	gi|297620629|ref|YP_003708766.1|	-	0.25	11.1	15.2	3.2	7.5	2.2	3.5	1	1	1	2	2	2	0	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
ATG16	PF08614.11	gi|297620629|ref|YP_003708766.1|	-	0.27	11.4	10.7	3.8	7.7	4.0	2.3	1	1	0	2	2	2	0	Autophagy	protein	16	(ATG16)
Fzo_mitofusin	PF04799.13	gi|297620629|ref|YP_003708766.1|	-	0.28	10.7	10.6	0.29	10.7	3.7	2.9	2	1	1	3	3	3	0	fzo-like	conserved	region
FmiP_Thoc5	PF09766.9	gi|297620629|ref|YP_003708766.1|	-	0.3	10.3	9.1	0.82	8.9	7.1	2.0	1	1	1	2	2	2	0	Fms-interacting	protein/Thoc5
KxDL	PF10241.9	gi|297620629|ref|YP_003708766.1|	-	0.33	11.2	7.8	3.6	7.9	0.9	3.6	1	1	3	4	4	4	0	Uncharacterized	conserved	protein
Fez1	PF06818.15	gi|297620629|ref|YP_003708766.1|	-	0.34	11.3	10.9	2.6	8.4	8.0	2.1	1	1	1	2	2	2	0	Fez1
ERM	PF00769.19	gi|297620629|ref|YP_003708766.1|	-	0.39	10.5	15.1	1.6	8.5	2.0	2.2	1	1	1	2	2	2	0	Ezrin/radixin/moesin	family
V_ATPase_I	PF01496.19	gi|297620629|ref|YP_003708766.1|	-	0.48	8.3	8.8	1.9	6.3	0.2	1.9	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
TMF_TATA_bd	PF12325.8	gi|297620629|ref|YP_003708766.1|	-	0.7	10.1	15.6	0.26	11.5	0.3	3.0	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
MutS_III	PF05192.18	gi|297620629|ref|YP_003708766.1|	-	1.2	9.3	4.0	2	8.6	4.0	1.4	1	0	0	1	1	1	0	MutS	domain	III
ZapB	PF06005.12	gi|297620629|ref|YP_003708766.1|	-	1.6	9.3	15.6	50	4.4	0.8	3.9	1	1	1	2	2	2	0	Cell	division	protein	ZapB
TMPIT	PF07851.13	gi|297620629|ref|YP_003708766.1|	-	1.7	7.8	7.9	2.6	7.2	4.0	2.3	1	1	2	3	3	3	0	TMPIT-like	protein
CENP-F_leu_zip	PF10473.9	gi|297620629|ref|YP_003708766.1|	-	2.1	8.4	19.8	4.4	7.3	2.1	2.9	1	1	2	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TMF_DNA_bd	PF12329.8	gi|297620629|ref|YP_003708766.1|	-	3.5	7.7	19.3	0.24	11.4	1.1	3.7	3	1	0	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
Vps51	PF08700.11	gi|297620629|ref|YP_003708766.1|	-	3.8	7.7	6.6	3.2	7.9	2.1	3.0	4	1	0	4	4	4	0	Vps51/Vps67
DHR10	PF18595.1	gi|297620629|ref|YP_003708766.1|	-	5.2	7.2	17.8	4.2	7.5	6.5	2.9	1	1	2	3	3	3	0	Designed	helical	repeat	protein	10	domain
Aminotran_4	PF01063.19	gi|297620630|ref|YP_003708767.1|	-	1e-35	123.6	0.0	1.3e-35	123.3	0.0	1.0	1	0	0	1	1	1	1	Amino-transferase	class	IV
DUF1743	PF08489.11	gi|297620630|ref|YP_003708767.1|	-	0.02	15.0	0.0	0.031	14.3	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1743)
RHS_repeat	PF05593.14	gi|297620631|ref|YP_003708768.1|	-	1.5e-43	146.8	76.5	6.2e-06	26.6	0.0	23.5	20	5	3	23	23	23	16	RHS	Repeat
MORN_2	PF07661.13	gi|297620631|ref|YP_003708768.1|	-	0.019	15.2	3.4	35	5.1	0.3	6.5	6	0	0	6	6	6	0	MORN	repeat	variant
HGTP_anticodon	PF03129.20	gi|297620635|ref|YP_003708772.1|	-	1.7e-12	47.3	0.1	3.6e-12	46.3	0.1	1.6	1	0	0	1	1	1	1	Anticodon	binding	domain
ProRS-C_1	PF09180.11	gi|297620635|ref|YP_003708772.1|	-	2.3e-12	46.9	0.0	6.4e-12	45.5	0.0	1.8	1	0	0	1	1	1	1	Prolyl-tRNA	synthetase,	C-terminal
tRNA-synt_2b	PF00587.25	gi|297620635|ref|YP_003708772.1|	-	2.8e-12	46.9	0.0	5.6e-12	46.0	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Spc7	PF08317.11	gi|297620636|ref|YP_003708773.1|	-	0.0014	17.6	6.5	0.0015	17.5	6.5	1.1	1	0	0	1	1	1	1	Spc7	kinetochore	protein
BshC	PF10079.9	gi|297620636|ref|YP_003708773.1|	-	0.0031	16.3	3.9	0.0031	16.3	3.9	1.0	1	0	0	1	1	1	1	Bacillithiol	biosynthesis	BshC
HlyD_2	PF12700.7	gi|297620636|ref|YP_003708773.1|	-	0.0062	15.3	7.9	0.0074	15.1	7.9	1.0	1	0	0	1	1	1	1	HlyD	family	secretion	protein
GrpE	PF01025.19	gi|297620636|ref|YP_003708773.1|	-	0.01	15.5	6.7	0.014	15.0	6.7	1.2	1	0	0	1	1	1	0	GrpE
TipAS	PF07739.13	gi|297620636|ref|YP_003708773.1|	-	0.01	16.4	2.7	0.011	16.2	1.5	1.6	1	1	1	2	2	2	0	TipAS	antibiotic-recognition	domain
Vps54_N	PF10475.9	gi|297620636|ref|YP_003708773.1|	-	0.011	15.0	4.0	0.013	14.8	4.0	1.0	1	0	0	1	1	1	0	Vacuolar-sorting	protein	54,	of	GARP	complex
Yuri_gagarin	PF15934.5	gi|297620636|ref|YP_003708773.1|	-	0.028	14.3	4.5	0.039	13.8	4.5	1.2	1	0	0	1	1	1	0	Yuri	gagarin
Glutaredoxin2_C	PF04399.13	gi|297620636|ref|YP_003708773.1|	-	0.04	13.7	4.6	0.15	11.9	1.4	2.0	1	1	0	2	2	2	0	Glutaredoxin	2,	C	terminal	domain
DUF1043	PF06295.12	gi|297620636|ref|YP_003708773.1|	-	0.072	13.1	3.5	0.053	13.5	1.9	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1043)
APG6_N	PF17675.1	gi|297620636|ref|YP_003708773.1|	-	0.15	12.6	7.8	0.21	12.1	7.8	1.2	1	0	0	1	1	1	0	Apg6	coiled-coil	region
Paralemmin	PF03285.15	gi|297620636|ref|YP_003708773.1|	-	0.26	10.8	4.1	0.31	10.6	4.1	1.1	1	0	0	1	1	1	0	Paralemmin
V_ATPase_I	PF01496.19	gi|297620636|ref|YP_003708773.1|	-	0.44	8.4	5.1	0.5	8.2	5.1	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
FAM76	PF16046.5	gi|297620636|ref|YP_003708773.1|	-	1.8	7.9	6.3	2.2	7.6	6.3	1.1	1	0	0	1	1	1	0	FAM76	protein
ACCA	PF03255.14	gi|297620636|ref|YP_003708773.1|	-	2.2	8.1	6.8	19	5.1	6.8	2.0	1	1	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
RasGEF	PF00617.19	gi|297620637|ref|YP_003708774.1|	-	7.8e-20	71.8	0.0	1.7e-19	70.7	0.0	1.6	1	0	0	1	1	1	1	RasGEF	domain
Methyltransf_28	PF02636.17	gi|297620638|ref|YP_003708775.1|	-	1.6e-05	24.7	0.0	2.6e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_33	PF10017.9	gi|297620638|ref|YP_003708775.1|	-	0.15	11.1	0.0	4.6	6.3	0.0	2.5	3	0	0	3	3	3	0	Histidine-specific	methyltransferase,	SAM-dependent
Methyltransf_31	PF13847.6	gi|297620638|ref|YP_003708775.1|	-	0.16	11.8	0.0	0.3	10.9	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Peptidase_M16_M	PF16187.5	gi|297620639|ref|YP_003708776.1|	-	3.3e-64	216.9	12.8	5.2e-63	212.9	7.0	2.4	2	0	0	2	2	2	2	Middle	or	third	domain	of	peptidase_M16
Peptidase_M16	PF00675.20	gi|297620639|ref|YP_003708776.1|	-	1.1e-33	116.3	2.8	1.7e-33	115.7	0.0	2.6	3	1	0	3	3	3	1	Insulinase	(Peptidase	family	M16)
Peptidase_M16_C	PF05193.21	gi|297620639|ref|YP_003708776.1|	-	4.5e-26	92.0	7.1	4.8e-18	65.8	0.0	2.9	3	0	0	3	3	3	2	Peptidase	M16	inactive	domain
Mei5_like	PF17021.5	gi|297620639|ref|YP_003708776.1|	-	0.016	15.3	0.3	0.052	13.6	0.3	2.0	1	0	0	1	1	1	0	Putative	double-strand	recombination	repair-like
Mvb12	PF09452.10	gi|297620639|ref|YP_003708776.1|	-	0.18	12.3	0.9	1.6	9.2	0.1	2.7	2	0	0	2	2	2	0	ESCRT-I	subunit	Mvb12
Ppx-GppA	PF02541.16	gi|297620639|ref|YP_003708776.1|	-	1.4	8.3	3.1	1.1	8.6	0.7	2.0	2	0	0	2	2	2	0	Ppx/GppA	phosphatase	family
Acyltransferase	PF01553.21	gi|297620641|ref|YP_003708778.1|	-	2.6e-10	40.0	0.0	4e-10	39.4	0.0	1.2	1	0	0	1	1	1	1	Acyltransferase
PUB	PF09409.10	gi|297620641|ref|YP_003708778.1|	-	0.096	12.6	0.0	0.2	11.6	0.0	1.5	1	0	0	1	1	1	0	PUB	domain
RNase_E_G	PF10150.9	gi|297620642|ref|YP_003708779.1|	-	1.1e-93	313.6	0.9	2.1e-93	312.6	0.9	1.5	1	0	0	1	1	1	1	Ribonuclease	E/G	family
S1	PF00575.23	gi|297620642|ref|YP_003708779.1|	-	1.8e-06	28.2	1.7	4.9e-06	26.8	1.7	1.8	1	1	0	1	1	1	1	S1	RNA	binding	domain
GIT1_C	PF12205.8	gi|297620643|ref|YP_003708780.1|	-	0.0082	16.2	2.1	0.013	15.6	1.2	1.6	1	1	1	2	2	2	1	G	protein-coupled	receptor	kinase-interacting	protein	1	C	term
APC_rep	PF18797.1	gi|297620643|ref|YP_003708780.1|	-	0.011	16.6	1.1	0.02	15.8	0.8	1.6	1	1	0	1	1	1	0	Adenomatous	polyposis	coli	(APC)	repeat
Phage_Mu_Gam	PF07352.12	gi|297620643|ref|YP_003708780.1|	-	0.015	15.2	0.9	0.029	14.3	0.5	1.6	1	1	1	2	2	2	0	Bacteriophage	Mu	Gam	like	protein
Syntaxin_2	PF14523.6	gi|297620643|ref|YP_003708780.1|	-	0.016	15.6	0.4	0.026	14.9	0.4	1.3	1	0	0	1	1	1	0	Syntaxin-like	protein
Vps53_N	PF04100.12	gi|297620643|ref|YP_003708780.1|	-	0.018	14.1	0.0	0.023	13.7	0.0	1.1	1	0	0	1	1	1	0	Vps53-like,	N-terminal
DUF3452	PF11934.8	gi|297620643|ref|YP_003708780.1|	-	0.085	12.4	0.4	0.12	11.9	0.4	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3452)
YceD	PF02620.17	gi|297620644|ref|YP_003708781.1|	-	2e-06	28.0	0.4	0.00078	19.6	0.0	2.2	1	1	1	2	2	2	2	Large	ribosomal	RNA	subunit	accumulation	protein	YceD
SR1P	PF13790.6	gi|297620644|ref|YP_003708781.1|	-	0.19	11.9	0.9	21	5.3	0.1	2.3	2	0	0	2	2	2	0	SR1	protein
Ribosomal_L32p	PF01783.23	gi|297620645|ref|YP_003708782.1|	-	1e-18	67.3	3.3	1.1e-18	67.2	3.3	1.0	1	0	0	1	1	1	1	Ribosomal	L32p	protein	family
FA_synthesis	PF02504.15	gi|297620646|ref|YP_003708783.1|	-	6.7e-68	229.1	0.0	7.6e-68	228.9	0.0	1.0	1	0	0	1	1	1	1	Fatty	acid	synthesis	protein
KASH_CCD	PF14662.6	gi|297620647|ref|YP_003708784.1|	-	0.0017	18.2	16.4	0.0044	16.9	15.1	1.9	1	1	1	2	2	2	2	Coiled-coil	region	of	CCDC155	or	KASH
NRBF2	PF08961.10	gi|297620647|ref|YP_003708784.1|	-	0.0023	17.5	14.5	0.047	13.3	1.7	3.3	1	1	2	3	3	3	2	Nuclear	receptor-binding	factor	2,	autophagy	regulator
TACC_C	PF05010.14	gi|297620647|ref|YP_003708784.1|	-	0.0037	17.1	12.1	0.14	11.9	1.2	2.1	1	1	1	2	2	2	2	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
ATG16	PF08614.11	gi|297620647|ref|YP_003708784.1|	-	0.0042	17.3	17.0	0.12	12.6	13.4	2.1	1	1	1	2	2	2	2	Autophagy	protein	16	(ATG16)
HMMR_C	PF15908.5	gi|297620647|ref|YP_003708784.1|	-	0.0079	16.5	8.9	0.0079	16.5	8.9	1.8	1	1	0	1	1	1	1	Hyaluronan	mediated	motility	receptor	C-terminal
YabA	PF06156.13	gi|297620647|ref|YP_003708784.1|	-	0.014	16.0	15.3	0.93	10.2	3.5	3.1	1	1	1	2	2	2	0	Initiation	control	protein	YabA
HMMR_N	PF15905.5	gi|297620647|ref|YP_003708784.1|	-	0.014	14.9	14.6	0.022	14.2	14.6	1.3	1	0	0	1	1	1	0	Hyaluronan	mediated	motility	receptor	N-terminal
TMF_TATA_bd	PF12325.8	gi|297620647|ref|YP_003708784.1|	-	0.023	14.9	2.0	0.023	14.9	2.0	2.6	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Taxilin	PF09728.9	gi|297620647|ref|YP_003708784.1|	-	0.049	12.8	19.5	0.11	11.7	8.4	2.1	1	1	1	2	2	2	0	Myosin-like	coiled-coil	protein
ASL_C	PF08328.11	gi|297620647|ref|YP_003708784.1|	-	0.05	13.7	1.0	0.083	13.0	1.0	1.4	1	0	0	1	1	1	0	Adenylosuccinate	lyase	C-terminal
Exonuc_VII_L	PF02601.15	gi|297620647|ref|YP_003708784.1|	-	0.052	13.1	9.6	0.072	12.7	9.6	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
GAS	PF13851.6	gi|297620647|ref|YP_003708784.1|	-	0.054	12.8	17.5	0.079	12.3	9.8	2.2	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
ZapB	PF06005.12	gi|297620647|ref|YP_003708784.1|	-	0.056	13.9	19.4	0.34	11.4	5.2	3.3	1	1	2	3	3	3	0	Cell	division	protein	ZapB
MbeD_MobD	PF04899.12	gi|297620647|ref|YP_003708784.1|	-	0.073	13.2	1.0	0.073	13.2	1.0	3.9	1	1	3	4	4	4	0	MbeD/MobD	like
JIP_LZII	PF16471.5	gi|297620647|ref|YP_003708784.1|	-	0.076	13.2	0.1	0.076	13.2	0.1	3.2	2	1	1	4	4	3	0	JNK-interacting	protein	leucine	zipper	II
Spc7	PF08317.11	gi|297620647|ref|YP_003708784.1|	-	0.1	11.5	13.2	0.031	13.2	9.0	1.7	1	1	1	2	2	2	0	Spc7	kinetochore	protein
COG2	PF06148.11	gi|297620647|ref|YP_003708784.1|	-	0.12	12.5	6.7	0.23	11.6	2.6	2.2	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF1664	PF07889.12	gi|297620647|ref|YP_003708784.1|	-	0.12	12.5	2.9	3.2	7.8	0.3	2.5	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF1722	PF08349.11	gi|297620647|ref|YP_003708784.1|	-	0.12	12.6	2.4	0.16	12.2	0.8	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1722)
DUF3450	PF11932.8	gi|297620647|ref|YP_003708784.1|	-	0.16	11.2	14.4	0.35	10.1	3.3	2.5	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3450)
ERM	PF00769.19	gi|297620647|ref|YP_003708784.1|	-	0.18	11.6	12.7	0.25	11.1	12.7	1.2	1	0	0	1	1	1	0	Ezrin/radixin/moesin	family
Rotamase	PF00639.21	gi|297620647|ref|YP_003708784.1|	-	0.19	12.7	1.3	1.1	10.2	0.5	2.2	1	1	1	2	2	2	0	PPIC-type	PPIASE	domain
Shugoshin_N	PF07558.11	gi|297620647|ref|YP_003708784.1|	-	0.22	11.4	4.0	4.9	7.1	0.3	3.4	3	0	0	3	3	3	0	Shugoshin	N-terminal	coiled-coil	region
HALZ	PF02183.18	gi|297620647|ref|YP_003708784.1|	-	0.28	11.4	9.5	1.4	9.2	1.9	4.1	1	1	1	3	3	3	0	Homeobox	associated	leucine	zipper
TMPIT	PF07851.13	gi|297620647|ref|YP_003708784.1|	-	0.28	10.4	7.0	0.065	12.5	3.7	1.5	1	1	0	1	1	1	0	TMPIT-like	protein
CENP-F_leu_zip	PF10473.9	gi|297620647|ref|YP_003708784.1|	-	0.34	10.9	16.4	0.35	10.9	7.5	2.3	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
CorA	PF01544.18	gi|297620647|ref|YP_003708784.1|	-	0.36	10.1	3.2	0.53	9.6	3.2	1.3	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
bZIP_1	PF00170.21	gi|297620647|ref|YP_003708784.1|	-	0.43	10.7	16.2	0.69	10.1	0.0	4.1	2	1	3	5	5	4	0	bZIP	transcription	factor
BLOC1_2	PF10046.9	gi|297620647|ref|YP_003708784.1|	-	0.46	10.8	8.4	1.7	9.0	5.5	2.5	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF4337	PF14235.6	gi|297620647|ref|YP_003708784.1|	-	0.62	10.2	3.8	9.6	6.3	1.7	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4337)
NYD-SP28_assoc	PF14775.6	gi|297620647|ref|YP_003708784.1|	-	0.66	10.1	12.5	0.29	11.3	0.5	3.8	1	1	3	4	4	4	0	Sperm	tail	C-terminal	domain
UPF0242	PF06785.11	gi|297620647|ref|YP_003708784.1|	-	0.94	9.5	18.5	0.16	12.1	9.6	2.3	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
NPV_P10	PF05531.12	gi|297620647|ref|YP_003708784.1|	-	1	9.9	3.5	6.7	7.3	0.8	2.9	1	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
FapA	PF03961.13	gi|297620647|ref|YP_003708784.1|	-	1.3	7.6	6.3	0.87	8.1	5.1	1.4	1	1	0	1	1	1	0	Flagellar	Assembly	Protein	A
APG6_N	PF17675.1	gi|297620647|ref|YP_003708784.1|	-	1.3	9.5	17.4	0.22	12.1	9.5	2.3	1	1	1	2	2	2	0	Apg6	coiled-coil	region
TPR_MLP1_2	PF07926.12	gi|297620647|ref|YP_003708784.1|	-	1.5	8.9	18.1	3	7.9	10.0	2.6	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
DUF4298	PF14131.6	gi|297620647|ref|YP_003708784.1|	-	1.6	8.8	9.5	2.1	8.3	0.9	3.0	2	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4298)
DUF4407	PF14362.6	gi|297620647|ref|YP_003708784.1|	-	1.8	7.8	5.4	2.4	7.5	5.4	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
GIT_CC	PF16559.5	gi|297620647|ref|YP_003708784.1|	-	2.6	8.0	19.2	2.1	8.3	0.7	4.4	2	2	3	5	5	5	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
GED	PF02212.18	gi|297620647|ref|YP_003708784.1|	-	2.9	8.1	7.3	1.1	9.4	1.4	2.6	2	1	0	2	2	2	0	Dynamin	GTPase	effector	domain
MCC-bdg_PDZ	PF10506.9	gi|297620647|ref|YP_003708784.1|	-	2.9	8.0	10.5	13	5.9	0.4	3.1	1	1	2	3	3	3	0	PDZ	domain	of	MCC-2	bdg	protein	for	Usher	syndrome
UPF0449	PF15136.6	gi|297620647|ref|YP_003708784.1|	-	3.3	8.3	11.2	11	6.5	6.9	2.9	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
DivIC	PF04977.15	gi|297620647|ref|YP_003708784.1|	-	4.1	7.2	14.3	11	5.9	0.5	4.2	1	1	4	5	5	5	0	Septum	formation	initiator
DASH_Hsk3	PF08227.11	gi|297620647|ref|YP_003708784.1|	-	4.2	7.8	11.7	8.9	6.8	2.9	3.8	2	1	1	4	4	3	0	DASH	complex	subunit	Hsk3	like
Tup_N	PF08581.10	gi|297620647|ref|YP_003708784.1|	-	4.7	7.6	9.3	1.6	9.1	1.7	2.8	1	1	1	2	2	2	0	Tup	N-terminal
DUF4200	PF13863.6	gi|297620647|ref|YP_003708784.1|	-	5.1	7.5	12.7	0.55	10.6	4.6	2.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4200)
Occludin_ELL	PF07303.13	gi|297620647|ref|YP_003708784.1|	-	6.7	7.5	8.8	5.4	7.8	1.3	2.5	1	1	2	3	3	3	0	Occludin	homology	domain
DHR10	PF18595.1	gi|297620647|ref|YP_003708784.1|	-	6.8	6.8	17.9	0.72	9.9	4.0	2.5	1	1	1	2	2	2	0	Designed	helical	repeat	protein	10	domain
DUF2347	PF09804.9	gi|297620647|ref|YP_003708784.1|	-	7.8	6.0	10.3	2	7.9	2.8	2.1	1	1	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2347)
AAA_11	PF13086.6	gi|297620648|ref|YP_003708785.1|	-	1.2e-09	38.4	0.2	2e-09	37.6	0.2	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|297620648|ref|YP_003708785.1|	-	1.7e-08	34.4	0.2	2.7e-08	33.7	0.2	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.6	gi|297620648|ref|YP_003708785.1|	-	3.4e-08	33.9	0.1	6.3e-08	33.1	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
DUF2075	PF09848.9	gi|297620648|ref|YP_003708785.1|	-	9.7e-05	21.8	0.1	0.00014	21.2	0.1	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
UvrD-helicase	PF00580.21	gi|297620648|ref|YP_003708785.1|	-	0.0054	16.3	0.3	0.0076	15.8	0.3	1.2	1	0	0	1	1	1	1	UvrD/REP	helicase	N-terminal	domain
PhoH	PF02562.16	gi|297620648|ref|YP_003708785.1|	-	0.0061	16.0	0.3	0.011	15.2	0.3	1.4	1	0	0	1	1	1	1	PhoH-like	protein
DnaB_C	PF03796.15	gi|297620648|ref|YP_003708785.1|	-	0.0084	15.5	0.1	0.017	14.5	0.0	1.4	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
AAA	PF00004.29	gi|297620648|ref|YP_003708785.1|	-	0.02	15.3	0.0	0.049	14.1	0.0	1.7	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Viral_helicase1	PF01443.18	gi|297620648|ref|YP_003708785.1|	-	0.031	14.0	0.0	0.048	13.4	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
cobW	PF02492.19	gi|297620648|ref|YP_003708785.1|	-	0.039	13.6	0.0	0.063	12.9	0.0	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_5	PF07728.14	gi|297620648|ref|YP_003708785.1|	-	0.095	12.7	0.0	0.21	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_7	PF12775.7	gi|297620648|ref|YP_003708785.1|	-	0.12	11.8	0.1	0.2	11.2	0.1	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
ResIII	PF04851.15	gi|297620648|ref|YP_003708785.1|	-	0.12	12.3	0.1	0.21	11.6	0.1	1.3	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
Virul_fac_BrkB	PF03631.15	gi|297620649|ref|YP_003708786.1|	-	0.015	14.9	0.2	0.018	14.6	0.2	1.1	1	0	0	1	1	1	0	Virulence	factor	BrkB
DUF374	PF04028.13	gi|297620650|ref|YP_003708787.1|	-	1.2e-13	50.4	0.0	2.3e-13	49.5	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF374)
LpxB	PF02684.15	gi|297620651|ref|YP_003708788.1|	-	1.5e-98	330.1	0.1	1.7e-98	329.9	0.1	1.0	1	0	0	1	1	1	1	Lipid-A-disaccharide	synthetase
Peripla_BP_6	PF13458.6	gi|297620651|ref|YP_003708788.1|	-	0.0042	16.8	0.0	0.0055	16.4	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
DUF3412	PF11892.8	gi|297620651|ref|YP_003708788.1|	-	0.055	13.5	0.0	0.17	12.0	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3412)
NuA4	PF09340.10	gi|297620651|ref|YP_003708788.1|	-	0.12	12.3	0.0	0.28	11.1	0.0	1.6	1	0	0	1	1	1	0	Histone	acetyltransferase	subunit	NuA4
Glycos_transf_2	PF00535.26	gi|297620652|ref|YP_003708789.1|	-	9.4e-27	93.9	0.0	1.5e-26	93.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|297620652|ref|YP_003708789.1|	-	5.5e-07	29.3	0.0	1.9e-06	27.6	0.0	1.7	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|297620652|ref|YP_003708789.1|	-	1.8e-05	24.8	0.0	2.9e-05	24.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|297620652|ref|YP_003708789.1|	-	0.056	14.0	0.0	0.11	13.0	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
BAAT_C	PF08840.11	gi|297620653|ref|YP_003708790.1|	-	0.00011	22.2	0.0	0.00016	21.6	0.0	1.2	1	0	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Peptidase_S9	PF00326.21	gi|297620653|ref|YP_003708790.1|	-	0.0003	20.3	0.0	0.0054	16.2	0.0	2.0	1	1	1	2	2	2	1	Prolyl	oligopeptidase	family
DLH	PF01738.18	gi|297620653|ref|YP_003708790.1|	-	0.0033	17.0	0.0	0.0049	16.5	0.0	1.3	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Esterase	PF00756.20	gi|297620653|ref|YP_003708790.1|	-	0.0045	16.7	0.0	0.0058	16.3	0.0	1.2	1	0	0	1	1	1	1	Putative	esterase
Abhydrolase_2	PF02230.16	gi|297620653|ref|YP_003708790.1|	-	0.0062	16.4	0.0	0.0087	15.9	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Abhydrolase_3	PF07859.13	gi|297620653|ref|YP_003708790.1|	-	0.019	14.8	0.0	0.027	14.3	0.0	1.2	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
AXE1	PF05448.12	gi|297620653|ref|YP_003708790.1|	-	0.076	11.7	0.0	0.11	11.2	0.0	1.2	1	0	0	1	1	1	0	Acetyl	xylan	esterase	(AXE1)
PolyA_pol	PF01743.20	gi|297620654|ref|YP_003708791.1|	-	2.7e-34	118.3	0.1	5.9e-34	117.2	0.0	1.6	2	0	0	2	2	2	1	Poly	A	polymerase	head	domain
PolyA_pol_RNAbd	PF12627.7	gi|297620654|ref|YP_003708791.1|	-	1.9e-15	56.4	1.3	3.9e-15	55.4	1.3	1.6	1	0	0	1	1	1	1	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
PolyA_pol_arg_C	PF12626.7	gi|297620654|ref|YP_003708791.1|	-	2.4e-05	24.3	1.2	0.00012	22.1	0.0	2.5	3	1	0	3	3	3	1	Polymerase	A	arginine-rich	C-terminus
LIDHydrolase	PF10230.9	gi|297620654|ref|YP_003708791.1|	-	0.12	11.9	0.9	3.7	7.0	0.3	2.2	1	1	1	2	2	2	0	Lipid-droplet	associated	hydrolase
Acetyltransf_1	PF00583.25	gi|297620655|ref|YP_003708792.1|	-	2.9e-12	46.8	0.0	4.3e-12	46.3	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_4	PF13420.7	gi|297620655|ref|YP_003708792.1|	-	1.4e-08	35.0	0.1	1.9e-08	34.6	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|297620655|ref|YP_003708792.1|	-	3e-08	33.7	0.0	3.8e-08	33.3	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|297620655|ref|YP_003708792.1|	-	3.3e-08	33.8	0.1	5.4e-08	33.2	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|297620655|ref|YP_003708792.1|	-	1.7e-07	31.1	0.0	8.5e-07	28.9	0.0	1.9	1	1	1	2	2	2	1	FR47-like	protein
Acetyltransf_9	PF13527.7	gi|297620655|ref|YP_003708792.1|	-	3.8e-05	23.7	0.0	7.8e-05	22.7	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|297620655|ref|YP_003708792.1|	-	0.00022	21.9	0.2	0.00033	21.4	0.2	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|297620655|ref|YP_003708792.1|	-	0.012	15.7	0.0	0.021	15.0	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
GlutR_dimer	PF00745.20	gi|297620655|ref|YP_003708792.1|	-	0.017	15.6	0.1	0.041	14.3	0.0	1.6	2	0	0	2	2	2	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
Acetyltransf_15	PF17013.5	gi|297620655|ref|YP_003708792.1|	-	0.095	12.2	0.0	0.11	12.0	0.0	1.2	1	0	0	1	1	1	0	Putative	acetyl-transferase
PGM_PMM_I	PF02878.16	gi|297620656|ref|YP_003708793.1|	-	5.8e-46	155.6	0.0	1.2e-45	154.6	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_III	PF02880.16	gi|297620656|ref|YP_003708793.1|	-	3.9e-34	117.3	0.4	8.7e-34	116.1	0.4	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_II	PF02879.16	gi|297620656|ref|YP_003708793.1|	-	8.3e-15	55.3	0.1	2.4e-14	53.8	0.1	1.8	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.20	gi|297620656|ref|YP_003708793.1|	-	6.2e-13	48.7	0.2	1.9e-12	47.1	0.2	1.9	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
MtrB	PF05440.12	gi|297620656|ref|YP_003708793.1|	-	0.088	13.2	0.0	0.23	11.9	0.0	1.6	1	0	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
SIS	PF01380.22	gi|297620657|ref|YP_003708794.1|	-	9.7e-48	161.3	0.0	4.7e-27	94.4	0.0	2.5	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.6	gi|297620657|ref|YP_003708794.1|	-	5.4e-20	72.0	0.0	1.1e-19	70.9	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|297620657|ref|YP_003708794.1|	-	1.3e-14	54.2	0.0	2.8e-14	53.1	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.6	gi|297620657|ref|YP_003708794.1|	-	0.002	17.0	0.0	0.0037	16.2	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
FadR_C	PF07840.12	gi|297620657|ref|YP_003708794.1|	-	0.12	12.3	0.1	0.33	10.9	0.1	1.7	1	0	0	1	1	1	0	FadR	C-terminal	domain
Trp_Tyr_perm	PF03222.13	gi|297620658|ref|YP_003708795.1|	-	2.5e-88	296.8	28.6	2.9e-88	296.6	28.6	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Virulence_RhuM	PF13310.6	gi|297620659|ref|YP_003708796.1|	-	7e-74	248.3	1.6	8.8e-74	247.9	1.6	1.1	1	0	0	1	1	1	1	Virulence	protein	RhuM	family
AAA_13	PF13166.6	gi|297620660|ref|YP_003708797.1|	-	1.3e-24	86.9	0.2	1.4e-24	86.8	0.2	1.0	1	0	0	1	1	1	1	AAA	domain
SbcD_C	PF12320.8	gi|297620661|ref|YP_003708798.1|	-	3.2e-20	72.2	0.1	8.1e-20	70.9	0.1	1.7	1	0	0	1	1	1	1	Type	5	capsule	protein	repressor	C-terminal	domain
Metallophos	PF00149.28	gi|297620661|ref|YP_003708798.1|	-	2.9e-14	54.1	0.0	7.1e-14	52.8	0.0	1.7	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|297620661|ref|YP_003708798.1|	-	2.8e-09	37.4	0.1	8.4e-08	32.6	0.0	2.8	1	1	1	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
FBPase_2	PF06874.11	gi|297620661|ref|YP_003708798.1|	-	0.033	12.5	0.0	0.047	12.0	0.0	1.2	1	0	0	1	1	1	0	Firmicute	fructose-1,6-bisphosphatase
AAA_23	PF13476.6	gi|297620662|ref|YP_003708799.1|	-	1.9e-27	97.1	0.0	1.9e-27	97.1	0.0	6.6	2	2	2	5	5	3	1	AAA	domain
SbcCD_C	PF13558.6	gi|297620662|ref|YP_003708799.1|	-	1.9e-13	50.4	0.1	5.1e-13	49.1	0.1	1.7	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_29	PF13555.6	gi|297620662|ref|YP_003708799.1|	-	1.4e-07	31.1	0.0	3e-07	30.1	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
CENP-F_leu_zip	PF10473.9	gi|297620662|ref|YP_003708799.1|	-	7.8e-07	29.2	2.6	7.8e-07	29.2	2.6	7.6	5	3	1	6	6	5	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
SMC_N	PF02463.19	gi|297620662|ref|YP_003708799.1|	-	0.00052	19.5	17.8	0.0059	16.1	17.8	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
T2SSE	PF00437.20	gi|297620662|ref|YP_003708799.1|	-	0.0067	15.5	2.2	0.015	14.4	0.0	2.5	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.27	gi|297620662|ref|YP_003708799.1|	-	0.011	16.2	0.0	0.011	16.2	0.0	4.3	4	2	0	4	4	4	0	ABC	transporter
AAA_21	PF13304.6	gi|297620662|ref|YP_003708799.1|	-	0.024	14.5	0.0	0.024	14.5	0.0	2.5	2	1	1	3	3	3	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
cobW	PF02492.19	gi|297620662|ref|YP_003708799.1|	-	0.034	13.7	0.0	0.099	12.2	0.0	1.8	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
NTPase_1	PF03266.15	gi|297620662|ref|YP_003708799.1|	-	0.036	14.0	0.0	0.14	12.0	0.0	2.1	1	0	0	1	1	1	0	NTPase
Ribosomal_S22	PF08136.11	gi|297620662|ref|YP_003708799.1|	-	0.045	14.1	0.6	0.41	11.0	0.2	2.5	2	0	0	2	2	2	0	30S	ribosomal	protein	subunit	S22	family
AAA_22	PF13401.6	gi|297620662|ref|YP_003708799.1|	-	0.055	13.7	6.5	0.13	12.5	0.0	3.9	3	2	0	3	3	3	0	AAA	domain
AAA_25	PF13481.6	gi|297620662|ref|YP_003708799.1|	-	0.074	12.6	3.0	0.46	10.0	0.0	3.2	3	0	0	3	3	3	0	AAA	domain
AAA_28	PF13521.6	gi|297620662|ref|YP_003708799.1|	-	0.095	12.9	2.8	1.3	9.3	0.0	3.1	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.29	gi|297620662|ref|YP_003708799.1|	-	0.12	12.8	0.7	1.1	9.7	0.0	3.0	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RsgA_GTPase	PF03193.16	gi|297620662|ref|YP_003708799.1|	-	0.14	12.1	2.6	1.2	9.0	0.0	3.4	3	0	0	3	3	3	0	RsgA	GTPase
AAA_18	PF13238.6	gi|297620662|ref|YP_003708799.1|	-	1	9.9	0.0	1	9.9	0.0	4.0	5	1	1	6	6	6	0	AAA	domain
Osmo_CC	PF08946.10	gi|297620662|ref|YP_003708799.1|	-	1.3	9.4	6.4	1.1	9.5	0.6	4.1	3	0	0	3	3	3	0	Osmosensory	transporter	coiled	coil
SRP54	PF00448.22	gi|297620664|ref|YP_003708801.1|	-	2e-76	256.0	0.5	2.8e-76	255.5	0.5	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.19	gi|297620664|ref|YP_003708801.1|	-	2.7e-08	33.9	0.7	7.7e-08	32.4	0.7	1.9	1	0	0	1	1	1	1	SRP54-type	protein,	helical	bundle	domain
AAA_30	PF13604.6	gi|297620664|ref|YP_003708801.1|	-	2.7e-07	30.5	2.0	4.7e-07	29.7	2.0	1.3	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|297620664|ref|YP_003708801.1|	-	4.6e-05	22.8	0.2	7.5e-05	22.1	0.2	1.3	1	0	0	1	1	1	1	Zeta	toxin
MeaB	PF03308.16	gi|297620664|ref|YP_003708801.1|	-	5e-05	22.4	0.1	0.0019	17.3	0.0	2.1	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_16	PF13191.6	gi|297620664|ref|YP_003708801.1|	-	8.2e-05	23.0	0.0	0.00016	22.1	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
CbiA	PF01656.23	gi|297620664|ref|YP_003708801.1|	-	0.00023	21.2	4.2	0.0022	18.1	1.8	3.0	1	1	1	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.6	gi|297620664|ref|YP_003708801.1|	-	0.00026	21.3	0.2	0.00086	19.6	0.0	1.9	2	1	0	2	2	1	1	AAA	domain
AAA_33	PF13671.6	gi|297620664|ref|YP_003708801.1|	-	0.00052	20.2	0.1	0.00084	19.5	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|297620664|ref|YP_003708801.1|	-	0.00054	20.4	0.6	0.0034	17.8	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
DUF2075	PF09848.9	gi|297620664|ref|YP_003708801.1|	-	0.0009	18.6	0.1	0.0013	18.1	0.1	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_31	PF13614.6	gi|297620664|ref|YP_003708801.1|	-	0.0011	18.9	0.6	0.0031	17.4	0.6	1.9	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|297620664|ref|YP_003708801.1|	-	0.0014	19.1	0.2	0.0042	17.5	0.2	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.27	gi|297620664|ref|YP_003708801.1|	-	0.0019	18.7	0.0	0.0065	17.0	0.0	1.8	1	1	1	2	2	2	1	ABC	transporter
AAA_24	PF13479.6	gi|297620664|ref|YP_003708801.1|	-	0.0023	17.7	0.2	0.0054	16.5	0.1	1.6	2	0	0	2	2	1	1	AAA	domain
Thymidylate_kin	PF02223.17	gi|297620664|ref|YP_003708801.1|	-	0.0028	17.3	2.8	0.02	14.5	0.1	2.7	2	1	1	3	3	3	1	Thymidylate	kinase
FTA4	PF13093.6	gi|297620664|ref|YP_003708801.1|	-	0.0031	17.4	0.0	0.0066	16.4	0.0	1.5	1	1	0	1	1	1	1	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
TK	PF00265.18	gi|297620664|ref|YP_003708801.1|	-	0.0053	16.6	0.0	0.0098	15.8	0.0	1.4	1	0	0	1	1	1	1	Thymidine	kinase
AAA_19	PF13245.6	gi|297620664|ref|YP_003708801.1|	-	0.0055	17.0	0.7	0.0097	16.2	0.7	1.5	1	1	0	1	1	1	1	AAA	domain
LpxK	PF02606.14	gi|297620664|ref|YP_003708801.1|	-	0.0059	15.7	0.0	0.011	14.9	0.0	1.4	1	0	0	1	1	1	1	Tetraacyldisaccharide-1-P	4'-kinase
ResIII	PF04851.15	gi|297620664|ref|YP_003708801.1|	-	0.014	15.4	0.0	0.062	13.3	0.0	2.0	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
ArsA_ATPase	PF02374.15	gi|297620664|ref|YP_003708801.1|	-	0.019	14.1	0.9	0.16	11.1	0.9	2.3	1	1	1	2	2	2	0	Anion-transporting	ATPase
KdpD	PF02702.17	gi|297620664|ref|YP_003708801.1|	-	0.021	14.3	0.6	0.069	12.6	0.6	1.8	1	1	0	1	1	1	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
ATPase	PF06745.13	gi|297620664|ref|YP_003708801.1|	-	0.023	14.0	0.3	0.3	10.4	0.3	2.3	1	1	0	1	1	1	0	KaiC
NTPase_1	PF03266.15	gi|297620664|ref|YP_003708801.1|	-	0.024	14.5	0.7	1	9.2	0.3	2.4	1	1	1	2	2	2	0	NTPase
MMR_HSR1	PF01926.23	gi|297620664|ref|YP_003708801.1|	-	0.025	14.7	0.4	0.1	12.7	0.4	2.1	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
NB-ARC	PF00931.22	gi|297620664|ref|YP_003708801.1|	-	0.027	13.7	0.0	0.097	11.8	0.0	1.8	2	0	0	2	2	2	0	NB-ARC	domain
DHHA1	PF02272.19	gi|297620664|ref|YP_003708801.1|	-	0.027	14.9	0.4	0.099	13.1	0.3	2.0	1	1	1	2	2	2	0	DHHA1	domain
AIG1	PF04548.16	gi|297620664|ref|YP_003708801.1|	-	0.035	13.4	0.5	2.6	7.3	0.0	2.4	2	0	0	2	2	2	0	AIG1	family
AAA_14	PF13173.6	gi|297620664|ref|YP_003708801.1|	-	0.036	14.1	0.0	0.12	12.4	0.0	2.0	2	1	0	2	2	1	0	AAA	domain
TniB	PF05621.11	gi|297620664|ref|YP_003708801.1|	-	0.037	13.4	0.0	0.086	12.2	0.0	1.7	1	1	0	1	1	1	0	Bacterial	TniB	protein
Rad17	PF03215.15	gi|297620664|ref|YP_003708801.1|	-	0.045	13.7	0.0	0.084	12.8	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_28	PF13521.6	gi|297620664|ref|YP_003708801.1|	-	0.055	13.7	0.3	0.15	12.3	0.3	1.8	1	1	1	2	2	2	0	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|297620664|ref|YP_003708801.1|	-	0.056	12.4	0.1	0.4	9.5	0.0	2.0	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
NACHT	PF05729.12	gi|297620664|ref|YP_003708801.1|	-	0.064	13.2	0.3	0.24	11.3	0.2	1.9	2	0	0	2	2	2	0	NACHT	domain
cobW	PF02492.19	gi|297620664|ref|YP_003708801.1|	-	0.069	12.7	0.4	0.25	10.9	0.4	1.9	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.14	gi|297620664|ref|YP_003708801.1|	-	0.08	12.8	0.9	0.75	9.7	0.2	2.5	1	1	2	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Diphthamide_syn	PF01866.17	gi|297620664|ref|YP_003708801.1|	-	0.083	12.3	0.3	0.45	9.9	0.2	2.1	2	1	0	2	2	2	0	Putative	diphthamide	synthesis	protein
KTI12	PF08433.10	gi|297620664|ref|YP_003708801.1|	-	0.099	12.1	0.0	0.61	9.5	0.0	2.0	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_5	PF07728.14	gi|297620664|ref|YP_003708801.1|	-	0.1	12.6	0.3	0.33	10.9	0.1	2.0	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DNA_pol3_chi	PF04364.13	gi|297620664|ref|YP_003708801.1|	-	0.15	12.2	0.0	0.34	11.1	0.0	1.6	1	0	0	1	1	1	0	DNA	polymerase	III	chi	subunit,	HolC
DUF87	PF01935.17	gi|297620664|ref|YP_003708801.1|	-	2	8.5	4.8	2.6	8.1	0.6	2.4	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
ATP-grasp_2	PF08442.10	gi|297620665|ref|YP_003708802.1|	-	5.5e-65	218.7	0.3	9e-65	218.0	0.3	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Ligase_CoA	PF00549.19	gi|297620665|ref|YP_003708802.1|	-	7.1e-24	84.4	1.6	1.4e-23	83.4	1.6	1.5	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.6	gi|297620665|ref|YP_003708802.1|	-	1.1e-09	38.0	1.1	1e-08	34.9	1.1	2.2	1	1	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.19	gi|297620665|ref|YP_003708802.1|	-	2.4e-05	24.2	0.1	4.3e-05	23.4	0.1	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp	PF02222.22	gi|297620665|ref|YP_003708802.1|	-	0.0078	15.8	0.0	0.014	14.9	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
CoA_binding	PF02629.19	gi|297620666|ref|YP_003708803.1|	-	1.1e-29	103.0	0.4	2.7e-29	101.7	0.1	1.9	2	0	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.19	gi|297620666|ref|YP_003708803.1|	-	7.1e-19	68.1	0.1	1.2e-18	67.3	0.1	1.4	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.6	gi|297620666|ref|YP_003708803.1|	-	7.3e-11	42.0	0.0	1.7e-10	40.9	0.0	1.5	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|297620666|ref|YP_003708803.1|	-	3.2e-05	24.4	0.0	6.1e-05	23.5	0.0	1.5	1	0	0	1	1	1	1	CoA	binding	domain
Peptidase_M50	PF02163.22	gi|297620667|ref|YP_003708804.1|	-	1.1e-11	44.5	12.8	1e-06	28.2	2.6	3.5	2	1	2	4	4	4	3	Peptidase	family	M50
ANAPC3	PF12895.7	gi|297620667|ref|YP_003708804.1|	-	6e-06	26.4	0.3	0.00013	22.1	0.1	2.4	1	1	1	2	2	2	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
Peptidase_M50B	PF13398.6	gi|297620667|ref|YP_003708804.1|	-	0.0047	16.6	12.9	0.0047	16.6	12.9	2.3	1	1	1	2	2	2	1	Peptidase	M50B-like
TPR_19	PF14559.6	gi|297620667|ref|YP_003708804.1|	-	0.016	15.7	1.0	3.1	8.4	0.1	2.7	1	1	0	2	2	2	0	Tetratricopeptide	repeat
Peptidase_M48	PF01435.18	gi|297620667|ref|YP_003708804.1|	-	0.038	13.8	0.1	4.7	6.9	0.1	2.4	2	0	0	2	2	2	0	Peptidase	family	M48
TPR_14	PF13428.6	gi|297620667|ref|YP_003708804.1|	-	0.095	13.6	3.1	43	5.3	0.0	3.8	3	1	1	4	4	4	0	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|297620667|ref|YP_003708804.1|	-	2.7	8.7	7.1	35	5.2	2.2	3.5	2	1	1	3	3	3	0	Tetratricopeptide	repeat
YukC	PF10140.9	gi|297620669|ref|YP_003708806.1|	-	0.094	11.5	0.1	0.16	10.7	0.1	1.3	1	0	0	1	1	1	0	WXG100	protein	secretion	system	(Wss),	protein	YukC
Med25_SD1	PF11235.8	gi|297620670|ref|YP_003708807.1|	-	5	7.4	14.4	0.4	11.0	5.3	2.8	3	0	0	3	3	3	0	Mediator	complex	subunit	25	synapsin	1
Pyr_redox_2	PF07992.14	gi|297620671|ref|YP_003708808.1|	-	1.8e-55	188.2	0.0	2.2e-55	188.0	0.0	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|297620671|ref|YP_003708808.1|	-	5.2e-17	62.2	2.8	1.8e-10	41.2	1.0	3.0	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|297620671|ref|YP_003708808.1|	-	9.7e-10	38.2	6.4	0.00012	21.4	0.3	3.6	3	1	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|297620671|ref|YP_003708808.1|	-	3.3e-09	36.8	6.8	0.0008	19.1	0.0	3.9	3	1	0	4	4	4	2	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|297620671|ref|YP_003708808.1|	-	4.5e-08	32.6	3.9	0.023	13.8	0.2	3.7	3	1	1	4	4	4	2	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.6	gi|297620671|ref|YP_003708808.1|	-	2.4e-05	24.4	1.4	0.67	9.9	0.1	3.7	4	0	0	4	4	4	1	FAD-NAD(P)-binding
NAD_binding_8	PF13450.6	gi|297620671|ref|YP_003708808.1|	-	2.5e-05	24.4	0.2	0.00054	20.1	0.1	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|297620671|ref|YP_003708808.1|	-	4.6e-05	22.3	5.5	0.074	11.7	0.0	4.0	3	1	1	4	4	4	2	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|297620671|ref|YP_003708808.1|	-	0.00073	18.9	6.7	0.0028	16.9	0.0	3.1	3	1	0	3	3	3	1	FAD	binding	domain
Shikimate_DH	PF01488.20	gi|297620671|ref|YP_003708808.1|	-	0.00088	19.3	0.1	1.2	9.2	0.0	3.1	4	0	0	4	4	4	2	Shikimate	/	quinate	5-dehydrogenase
TrkA_N	PF02254.18	gi|297620671|ref|YP_003708808.1|	-	0.0032	17.7	0.4	0.73	10.1	0.0	3.2	3	0	0	3	3	3	1	TrkA-N	domain
FAD_binding_2	PF00890.24	gi|297620671|ref|YP_003708808.1|	-	0.0038	16.4	1.8	0.0051	16.0	0.0	2.3	3	1	0	3	3	3	1	FAD	binding	domain
Thi4	PF01946.17	gi|297620671|ref|YP_003708808.1|	-	0.0056	15.9	0.0	0.28	10.4	0.0	2.4	2	0	0	2	2	2	1	Thi4	family
NAD_binding_7	PF13241.6	gi|297620671|ref|YP_003708808.1|	-	0.018	15.5	0.0	0.65	10.5	0.0	2.6	2	1	0	2	2	2	0	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|297620671|ref|YP_003708808.1|	-	0.02	14.2	0.4	0.068	12.5	0.1	2.1	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.12	gi|297620671|ref|YP_003708808.1|	-	0.025	13.6	0.5	1	8.3	0.0	2.4	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Amino_oxidase	PF01593.24	gi|297620671|ref|YP_003708808.1|	-	0.21	10.8	0.0	21	4.2	0.0	2.8	3	0	0	3	3	3	0	Flavin	containing	amine	oxidoreductase
FAD_oxidored	PF12831.7	gi|297620671|ref|YP_003708808.1|	-	0.62	9.3	0.0	0.62	9.3	0.0	2.5	2	1	0	2	2	2	0	FAD	dependent	oxidoreductase
Trypsin_2	PF13365.6	gi|297620673|ref|YP_003708810.1|	-	4.4e-35	121.8	0.1	8.2e-35	120.9	0.1	1.5	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
PDZ_2	PF13180.6	gi|297620673|ref|YP_003708810.1|	-	2.7e-31	107.7	3.0	4.2e-19	68.7	0.1	2.7	3	0	0	3	3	3	2	PDZ	domain
PDZ	PF00595.24	gi|297620673|ref|YP_003708810.1|	-	9.5e-23	80.4	3.4	1.5e-12	47.7	0.1	2.7	2	0	0	2	2	2	2	PDZ	domain
PDZ_6	PF17820.1	gi|297620673|ref|YP_003708810.1|	-	4.4e-22	77.7	0.2	9e-12	44.7	0.0	2.9	2	0	0	2	2	2	2	PDZ	domain
Trypsin	PF00089.26	gi|297620673|ref|YP_003708810.1|	-	2.7e-15	56.8	0.0	5.1e-15	55.9	0.0	1.4	1	0	0	1	1	1	1	Trypsin
Tricorn_PDZ	PF14685.6	gi|297620673|ref|YP_003708810.1|	-	1.1e-07	31.7	0.1	0.005	16.8	0.0	2.6	2	0	0	2	2	2	2	Tricorn	protease	PDZ	domain
PDZ_1	PF12812.7	gi|297620673|ref|YP_003708810.1|	-	2.2e-05	24.4	0.1	0.00066	19.6	0.0	2.7	2	0	0	2	2	2	1	PDZ-like	domain
Peptidase_S46	PF10459.9	gi|297620673|ref|YP_003708810.1|	-	0.001	17.8	0.3	0.74	8.4	0.0	2.1	2	0	0	2	2	2	2	Peptidase	S46
GRASP55_65	PF04495.14	gi|297620673|ref|YP_003708810.1|	-	0.0013	19.0	0.6	1.3	9.4	0.0	2.7	2	1	0	3	3	3	2	GRASP55/65	PDZ-like	domain
Peptidase_S29	PF02907.15	gi|297620673|ref|YP_003708810.1|	-	0.013	15.2	0.1	0.028	14.1	0.1	1.5	1	0	0	1	1	1	0	Hepatitis	C	virus	NS3	protease
DUF3394	PF11874.8	gi|297620673|ref|YP_003708810.1|	-	0.016	14.9	0.0	0.69	9.6	0.0	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3394)
DUF4222	PF13973.6	gi|297620673|ref|YP_003708810.1|	-	0.11	12.1	0.0	0.39	10.4	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4222)
Peptidase_M20	PF01546.28	gi|297620674|ref|YP_003708811.1|	-	1.4e-32	113.1	0.0	1.7e-32	112.9	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|297620674|ref|YP_003708811.1|	-	3.8e-25	87.9	0.0	6.8e-25	87.1	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
DHFR_2	PF06442.11	gi|297620674|ref|YP_003708811.1|	-	0.023	14.5	0.0	0.046	13.6	0.0	1.4	1	0	0	1	1	1	0	R67	dihydrofolate	reductase
Peptidase_M42	PF05343.14	gi|297620674|ref|YP_003708811.1|	-	0.17	10.9	0.0	1	8.3	0.0	1.9	2	0	0	2	2	2	0	M42	glutamyl	aminopeptidase
Peptidase_M48	PF01435.18	gi|297620675|ref|YP_003708812.1|	-	6.4e-15	55.4	0.0	1.3e-14	54.4	0.0	1.5	1	0	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.11	gi|297620675|ref|YP_003708812.1|	-	0.019	14.2	0.4	0.019	14.2	0.4	2.1	2	0	0	2	2	2	0	BlaR1	peptidase	M56
SDF	PF00375.18	gi|297620676|ref|YP_003708813.1|	-	7.6e-107	357.7	30.9	8.5e-107	357.5	30.9	1.0	1	0	0	1	1	1	1	Sodium:dicarboxylate	symporter	family
Methyltransf_9	PF08003.11	gi|297620676|ref|YP_003708813.1|	-	0.087	11.7	0.0	0.13	11.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
Abhydrolase_2	PF02230.16	gi|297620677|ref|YP_003708814.1|	-	0.0023	17.8	0.0	0.0043	16.9	0.0	1.4	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
DLH	PF01738.18	gi|297620677|ref|YP_003708814.1|	-	0.09	12.3	0.0	0.13	11.8	0.0	1.2	1	0	0	1	1	1	0	Dienelactone	hydrolase	family
Glyco_transf_5	PF08323.11	gi|297620678|ref|YP_003708815.1|	-	1.6e-32	113.1	0.0	4e-32	111.9	0.0	1.7	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Alpha-amylase	PF00128.24	gi|297620678|ref|YP_003708815.1|	-	1.6e-14	54.2	2.6	2.4e-11	43.8	0.2	2.9	2	1	0	2	2	2	1	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.18	gi|297620678|ref|YP_003708815.1|	-	1.6e-11	44.4	0.2	7.2e-11	42.3	0.1	2.3	2	0	0	2	2	2	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Glycos_transf_1	PF00534.20	gi|297620678|ref|YP_003708815.1|	-	3.6e-08	33.1	0.0	7.5e-07	28.8	0.0	2.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Alpha-amylase_C	PF02806.18	gi|297620678|ref|YP_003708815.1|	-	4.6e-08	33.4	0.0	2.6e-07	31.0	0.0	2.4	1	0	0	1	1	1	1	Alpha	amylase,	C-terminal	all-beta	domain
Glyco_trans_1_4	PF13692.6	gi|297620678|ref|YP_003708815.1|	-	1e-05	26.0	0.0	2.6e-05	24.7	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|297620678|ref|YP_003708815.1|	-	0.017	15.1	0.0	0.048	13.7	0.0	1.8	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|297620678|ref|YP_003708815.1|	-	0.15	12.5	0.0	0.32	11.4	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
Glyco_transf_8	PF01501.20	gi|297620679|ref|YP_003708816.1|	-	1.5e-06	27.9	0.4	6.3e-06	25.9	0.4	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	8
tRNA_Me_trans	PF03054.16	gi|297620680|ref|YP_003708817.1|	-	8.2e-139	462.3	0.0	9.2e-139	462.1	0.0	1.0	1	0	0	1	1	1	1	tRNA	methyl	transferase
NAD_synthase	PF02540.17	gi|297620680|ref|YP_003708817.1|	-	6.4e-08	32.0	0.0	2.3e-05	23.6	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
ThiI	PF02568.14	gi|297620680|ref|YP_003708817.1|	-	0.00014	21.5	0.0	0.00047	19.8	0.0	1.8	2	0	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
ATP_bind_3	PF01171.20	gi|297620680|ref|YP_003708817.1|	-	0.00067	19.5	0.0	0.0016	18.3	0.0	1.6	1	1	0	1	1	1	1	PP-loop	family
QueC	PF06508.13	gi|297620680|ref|YP_003708817.1|	-	0.0016	18.0	0.0	0.005	16.4	0.0	1.7	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.21	gi|297620680|ref|YP_003708817.1|	-	0.12	12.1	0.0	0.17	11.6	0.0	1.2	1	0	0	1	1	1	0	Asparagine	synthase
adh_short_C2	PF13561.6	gi|297620683|ref|YP_003708820.1|	-	5e-66	222.6	0.8	6e-66	222.3	0.8	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|297620683|ref|YP_003708820.1|	-	1e-57	194.8	1.7	1.2e-57	194.5	1.7	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|297620683|ref|YP_003708820.1|	-	1.4e-16	60.9	0.7	3.5e-16	59.6	0.7	1.6	1	1	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|297620683|ref|YP_003708820.1|	-	0.0006	19.3	0.1	0.00087	18.8	0.1	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|297620683|ref|YP_003708820.1|	-	0.0023	17.4	0.1	0.004	16.6	0.1	1.4	2	0	0	2	2	2	1	GDP-mannose	4,6	dehydratase
Polysacc_synt_2	PF02719.15	gi|297620683|ref|YP_003708820.1|	-	0.0049	16.0	0.7	0.0066	15.6	0.7	1.1	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
Glyco_hydro_15	PF00723.21	gi|297620684|ref|YP_003708821.1|	-	2.5e-54	184.8	0.3	8.9e-52	176.4	0.3	2.1	1	1	0	1	1	1	1	Glycosyl	hydrolases	family	15
Xin	PF08043.12	gi|297620684|ref|YP_003708821.1|	-	0.14	11.8	0.0	0.34	10.6	0.0	1.7	1	0	0	1	1	1	0	Xin	repeat
OMP_b-brl	PF13505.6	gi|297620685|ref|YP_003708822.1|	-	1.3e-07	31.9	1.0	0.00069	19.8	1.7	2.1	1	1	1	2	2	2	2	Outer	membrane	protein	beta-barrel	domain
Pom	PF17251.2	gi|297620685|ref|YP_003708822.1|	-	0.00033	20.1	0.1	0.033	13.5	0.1	2.2	2	0	0	2	2	2	2	Protochlamydia	outer	membrane	protein
Autotransporter	PF03797.19	gi|297620685|ref|YP_003708822.1|	-	0.004	16.8	0.0	59	3.2	0.0	2.2	1	1	0	1	1	1	0	Autotransporter	beta-domain
TAP35_44	PF07265.11	gi|297620685|ref|YP_003708822.1|	-	0.066	13.2	0.0	0.12	12.4	0.0	1.4	1	0	0	1	1	1	0	Tapetum	specific	protein	TAP35/TAP44
MtrB_PioB	PF11854.8	gi|297620685|ref|YP_003708822.1|	-	0.067	11.5	0.2	0.15	10.4	0.3	1.6	2	1	0	2	2	2	0	Putative	outer	membrane	beta-barrel	porin,	MtrB/PioB
Acyl-CoA_dh_1	PF00441.24	gi|297620687|ref|YP_003708824.1|	-	5.2e-32	111.1	0.2	4.2e-31	108.2	0.1	2.2	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.16	gi|297620687|ref|YP_003708824.1|	-	2.6e-29	102.2	0.1	5.6e-29	101.1	0.1	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|297620687|ref|YP_003708824.1|	-	8.8e-23	80.3	0.1	1.7e-22	79.4	0.1	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.11	gi|297620687|ref|YP_003708824.1|	-	6.4e-11	42.7	0.0	4.2e-10	40.0	0.0	2.2	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_ox_N	PF14749.6	gi|297620687|ref|YP_003708824.1|	-	0.0012	19.4	0.0	0.0027	18.3	0.0	1.6	1	0	0	1	1	1	1	Acyl-coenzyme	A	oxidase	N-terminal
Carboxyl_trans	PF01039.22	gi|297620688|ref|YP_003708825.1|	-	4.6e-131	437.8	0.1	5.8e-131	437.5	0.1	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.11	gi|297620688|ref|YP_003708825.1|	-	5e-05	22.9	0.2	0.0028	17.2	0.1	2.2	2	0	0	2	2	2	2	Malonate	decarboxylase	gamma	subunit	(MdcE)
ECH_1	PF00378.20	gi|297620688|ref|YP_003708825.1|	-	0.054	12.8	1.9	0.76	9.0	0.1	2.4	2	0	0	2	2	2	0	Enoyl-CoA	hydratase/isomerase
AtuA	PF07287.11	gi|297620689|ref|YP_003708826.1|	-	1.9e-116	388.7	0.0	2.2e-116	388.5	0.0	1.0	1	0	0	1	1	1	1	Acyclic	terpene	utilisation	family	protein	AtuA
ECH_1	PF00378.20	gi|297620691|ref|YP_003708828.1|	-	3.2e-51	174.1	0.0	3.7e-51	173.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
ECH_2	PF16113.5	gi|297620691|ref|YP_003708828.1|	-	2.3e-20	73.4	0.1	3.5e-20	72.8	0.1	1.3	1	1	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
Lactamase_B	PF00753.27	gi|297620692|ref|YP_003708829.1|	-	4.4e-13	49.7	2.1	2.4e-12	47.3	2.1	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|297620692|ref|YP_003708829.1|	-	0.0012	18.3	0.4	0.0021	17.6	0.4	1.7	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
RHS_repeat	PF05593.14	gi|297620694|ref|YP_003708831.1|	-	7.8e-53	176.4	51.6	1.6e-05	25.3	0.1	20.6	18	3	5	23	23	23	13	RHS	Repeat
MORN_2	PF07661.13	gi|297620694|ref|YP_003708831.1|	-	0.0087	16.2	6.2	14	6.3	0.0	8.8	9	0	0	9	9	9	1	MORN	repeat	variant
TcfC	PF16967.5	gi|297620694|ref|YP_003708831.1|	-	0.066	12.7	0.0	0.37	10.3	0.0	2.2	2	0	0	2	2	2	0	E-set	like	domain
Prok-RING_1	PF14446.6	gi|297620698|ref|YP_003708835.1|	-	0.12	12.3	7.3	0.44	10.5	4.0	2.3	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
RHS_repeat	PF05593.14	gi|297620700|ref|YP_003708837.1|	-	1.9e-19	69.7	20.3	3.5e-06	27.4	0.1	8.4	9	1	0	9	9	9	4	RHS	Repeat
MORN_2	PF07661.13	gi|297620700|ref|YP_003708837.1|	-	0.0035	17.4	0.1	3.2	8.3	0.0	4.9	5	0	0	5	5	5	1	MORN	repeat	variant
4HBT_2	PF13279.6	gi|297620701|ref|YP_003708838.1|	-	2.1e-14	54.1	0.3	2.4e-14	53.9	0.3	1.0	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.22	gi|297620701|ref|YP_003708838.1|	-	1.4e-11	44.6	0.0	1.9e-11	44.1	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
Acyl-ACP_TE	PF01643.17	gi|297620701|ref|YP_003708838.1|	-	2.4e-09	36.9	0.0	2.7e-09	36.7	0.0	1.0	1	0	0	1	1	1	1	Acyl-ACP	thioesterase
MM_CoA_mutase	PF01642.22	gi|297620703|ref|YP_003708840.1|	-	1.4e-135	452.8	0.1	1.9e-135	452.4	0.1	1.1	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
MeaB	PF03308.16	gi|297620703|ref|YP_003708840.1|	-	3e-40	137.9	0.1	5.7e-40	137.0	0.1	1.5	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
B12-binding	PF02310.19	gi|297620703|ref|YP_003708840.1|	-	4.4e-13	49.3	0.0	3.1e-12	46.6	0.0	2.4	3	0	0	3	3	3	1	B12	binding	domain
cobW	PF02492.19	gi|297620703|ref|YP_003708840.1|	-	3.5e-09	36.5	0.0	9e-09	35.2	0.0	1.7	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
Tnp_22_dsRBD	PF17490.2	gi|297620703|ref|YP_003708840.1|	-	0.034	14.2	0.0	8.8	6.4	0.0	2.7	2	0	0	2	2	2	0	L1	transposable	element	dsRBD-like	domain
AAA_29	PF13555.6	gi|297620703|ref|YP_003708840.1|	-	0.078	12.7	0.0	0.18	11.6	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.27	gi|297620703|ref|YP_003708840.1|	-	0.08	13.5	0.1	0.44	11.1	0.0	2.3	2	0	0	2	2	2	0	ABC	transporter
SRP54	PF00448.22	gi|297620703|ref|YP_003708840.1|	-	0.084	12.5	0.0	0.35	10.5	0.0	2.1	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
RsgA_GTPase	PF03193.16	gi|297620703|ref|YP_003708840.1|	-	0.1	12.5	0.0	1.4	8.8	0.0	2.4	2	0	0	2	2	2	0	RsgA	GTPase
NB-ARC	PF00931.22	gi|297620703|ref|YP_003708840.1|	-	0.11	11.6	0.0	0.25	10.5	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
ABC_tran_Xtn	PF12848.7	gi|297620703|ref|YP_003708840.1|	-	1.9	8.6	6.2	0.83	9.7	1.7	2.6	2	0	0	2	2	2	0	ABC	transporter
AAA_23	PF13476.6	gi|297620703|ref|YP_003708840.1|	-	2.9	8.3	9.8	8.1	6.9	0.0	3.5	4	0	0	4	4	4	0	AAA	domain
Peptidase_M23	PF01551.22	gi|297620704|ref|YP_003708841.1|	-	3e-16	59.4	0.0	2.3e-15	56.5	0.0	2.1	2	0	0	2	2	2	1	Peptidase	family	M23
E1_dh	PF00676.20	gi|297620705|ref|YP_003708842.1|	-	1.1e-90	303.6	0.0	1.3e-90	303.4	0.0	1.1	1	0	0	1	1	1	1	Dehydrogenase	E1	component
SR-25	PF10500.9	gi|297620705|ref|YP_003708842.1|	-	0.063	12.9	0.7	0.11	12.1	0.7	1.4	1	0	0	1	1	1	0	Nuclear	RNA-splicing-associated	protein
DXP_synthase_N	PF13292.6	gi|297620705|ref|YP_003708842.1|	-	0.078	12.2	0.0	0.34	10.1	0.0	1.9	2	0	0	2	2	2	0	1-deoxy-D-xylulose-5-phosphate	synthase
Transket_pyr	PF02779.24	gi|297620706|ref|YP_003708843.1|	-	1.6e-43	148.5	0.0	2.2e-43	148.0	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.20	gi|297620706|ref|YP_003708843.1|	-	4.7e-38	129.9	0.0	1e-37	128.7	0.0	1.6	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
PFOR_II	PF17147.4	gi|297620706|ref|YP_003708843.1|	-	0.0077	16.5	0.0	0.014	15.6	0.0	1.5	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
2-oxoacid_dh	PF00198.23	gi|297620707|ref|YP_003708844.1|	-	1e-71	241.1	0.0	1.8e-71	240.3	0.0	1.4	2	0	0	2	2	2	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
Biotin_lipoyl	PF00364.22	gi|297620707|ref|YP_003708844.1|	-	2.2e-15	56.2	0.3	4.9e-15	55.1	0.3	1.6	1	0	0	1	1	1	1	Biotin-requiring	enzyme
E3_binding	PF02817.17	gi|297620707|ref|YP_003708844.1|	-	2.8e-15	56.4	1.5	5.9e-15	55.3	0.2	2.2	2	0	0	2	2	2	1	e3	binding	domain
DUF2332	PF10094.9	gi|297620707|ref|YP_003708844.1|	-	0.023	14.1	0.0	0.16	11.4	0.0	1.9	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2332)
BetR	PF08667.10	gi|297620707|ref|YP_003708844.1|	-	0.14	12.2	0.0	1.4	8.9	0.0	2.1	2	0	0	2	2	2	0	BetR	domain
DUF488	PF04343.13	gi|297620708|ref|YP_003708845.1|	-	4.4e-28	98.3	0.5	5e-28	98.1	0.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
NAD_binding_1	PF00175.21	gi|297620709|ref|YP_003708846.1|	-	2e-15	57.4	0.0	8.3e-15	55.4	0.0	2.0	2	0	0	2	2	2	1	Oxidoreductase	NAD-binding	domain
Globin	PF00042.22	gi|297620709|ref|YP_003708846.1|	-	1.1e-12	48.4	0.1	2.6e-11	44.0	0.0	2.3	2	0	0	2	2	2	1	Globin
FAD_binding_6	PF00970.24	gi|297620709|ref|YP_003708846.1|	-	6.5e-11	42.5	0.0	1.2e-10	41.7	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
Protoglobin	PF11563.8	gi|297620709|ref|YP_003708846.1|	-	9.3e-06	25.6	0.3	3.5e-05	23.8	0.1	1.9	2	0	0	2	2	2	1	Protoglobin
NAD_binding_6	PF08030.12	gi|297620709|ref|YP_003708846.1|	-	0.00023	21.3	0.1	0.00078	19.6	0.0	1.9	2	0	0	2	2	2	1	Ferric	reductase	NAD	binding	domain
Mur_ligase_C	PF02875.21	gi|297620709|ref|YP_003708846.1|	-	0.0043	17.3	0.1	3.6	7.9	0.0	2.4	2	0	0	2	2	2	2	Mur	ligase	family,	glutamate	ligase	domain
DUF1722	PF08349.11	gi|297620709|ref|YP_003708846.1|	-	0.1	12.9	0.4	2	8.7	0.0	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1722)
DUF937	PF06078.11	gi|297620709|ref|YP_003708846.1|	-	0.15	12.6	0.0	0.24	12.0	0.0	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF937)
Arginase	PF00491.21	gi|297620710|ref|YP_003708847.1|	-	5.8e-51	173.6	0.0	7.8e-51	173.2	0.0	1.1	1	0	0	1	1	1	1	Arginase	family
T4-Gluco-transf	PF09198.10	gi|297620710|ref|YP_003708847.1|	-	0.063	12.9	0.0	1.7	8.4	0.0	2.7	2	0	0	2	2	2	0	Bacteriophage	T4	beta-glucosyltransferase
PIG-L	PF02585.17	gi|297620711|ref|YP_003708848.1|	-	9.7e-20	71.5	0.7	1.2e-19	71.2	0.1	1.4	2	0	0	2	2	2	1	GlcNAc-PI	de-N-acetylase
Methyltrans_SAM	PF10672.9	gi|297620713|ref|YP_003708850.1|	-	4.7e-21	75.2	0.0	6e-21	74.8	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine-dependent	methyltransferase
Cons_hypoth95	PF03602.15	gi|297620713|ref|YP_003708850.1|	-	3.4e-05	23.5	0.0	7.8e-05	22.4	0.0	1.6	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Met_10	PF02475.16	gi|297620713|ref|YP_003708850.1|	-	0.0021	17.8	0.0	0.0027	17.5	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
GshA	PF08886.11	gi|297620713|ref|YP_003708850.1|	-	0.17	10.4	0.9	0.75	8.3	0.0	2.0	1	1	1	2	2	2	0	Glutamate-cysteine	ligase
DDE_Tnp_1_assoc	PF13808.6	gi|297620715|ref|YP_003708852.1|	-	5.4e-27	93.7	0.3	1.6e-26	92.1	0.1	1.9	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.21	gi|297620715|ref|YP_003708852.1|	-	9e-14	51.6	0.2	1.2e-13	51.2	0.2	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DUF3981	PF13139.6	gi|297620717|ref|YP_003708854.1|	-	0.58	10.6	8.8	0.89	10.0	0.6	2.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3981)
DUF485	PF04341.12	gi|297620717|ref|YP_003708854.1|	-	0.87	9.6	7.9	0.21	11.5	1.3	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF485
Rrf2	PF02082.20	gi|297620718|ref|YP_003708855.1|	-	2.8e-24	85.3	0.4	3.5e-24	85.0	0.4	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
HrcA_DNA-bdg	PF03444.15	gi|297620718|ref|YP_003708855.1|	-	3.9e-05	23.2	0.0	5.4e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HTH_29	PF13551.6	gi|297620718|ref|YP_003708855.1|	-	0.002	18.1	0.1	0.003	17.6	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn	helix
Fe_dep_repress	PF01325.19	gi|297620718|ref|YP_003708855.1|	-	0.0031	17.7	0.2	0.0044	17.2	0.2	1.2	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR_2	PF12802.7	gi|297620718|ref|YP_003708855.1|	-	0.0088	15.9	0.0	0.012	15.5	0.0	1.2	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|297620718|ref|YP_003708855.1|	-	0.021	14.7	0.1	0.028	14.3	0.1	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF2250	PF10007.9	gi|297620718|ref|YP_003708855.1|	-	0.025	14.7	0.2	0.051	13.7	0.2	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_11	PF08279.12	gi|297620718|ref|YP_003708855.1|	-	0.031	14.2	0.3	0.063	13.2	0.3	1.6	1	1	0	1	1	1	0	HTH	domain
GntR	PF00392.21	gi|297620718|ref|YP_003708855.1|	-	0.07	12.8	0.1	0.1	12.3	0.1	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Hemerythrin	PF01814.23	gi|297620719|ref|YP_003708856.1|	-	1.7e-22	80.4	2.2	2.5e-22	79.9	2.2	1.3	1	0	0	1	1	1	1	Hemerythrin	HHE	cation	binding	domain
ScdA_N	PF04405.14	gi|297620719|ref|YP_003708856.1|	-	1.4e-19	69.4	0.4	3.6e-19	68.2	0.3	1.8	2	0	0	2	2	2	1	Domain	of	Unknown	function	(DUF542)
DUF1858	PF08984.11	gi|297620719|ref|YP_003708856.1|	-	0.00046	20.3	0.1	0.0035	17.5	0.1	2.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1858)
HTH_40	PF14493.6	gi|297620719|ref|YP_003708856.1|	-	0.034	14.6	4.7	0.05	14.1	0.6	2.4	1	1	0	2	2	2	0	Helix-turn-helix	domain
DUF5344	PF17279.2	gi|297620719|ref|YP_003708856.1|	-	1.3	9.7	6.8	13	6.4	1.4	3.3	1	1	2	3	3	3	0	Family	of	unknown	function	(DUF5344)
COX1	PF00115.20	gi|297620720|ref|YP_003708857.1|	-	5e-62	210.2	52.7	5e-62	210.2	52.7	1.9	3	0	0	3	3	3	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
Med27	PF11571.8	gi|297620720|ref|YP_003708857.1|	-	0.027	14.8	0.0	0.063	13.6	0.0	1.6	1	0	0	1	1	1	0	Mediator	complex	subunit	27
PDR_assoc	PF08370.11	gi|297620720|ref|YP_003708857.1|	-	0.81	9.5	8.7	0.049	13.4	0.7	3.3	3	0	0	3	3	3	0	Plant	PDR	ABC	transporter	associated
DUF3754	PF12576.8	gi|297620720|ref|YP_003708857.1|	-	0.93	9.4	2.3	3	7.8	0.1	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3754)
DUF1003	PF06210.11	gi|297620721|ref|YP_003708858.1|	-	3.4e-34	117.0	1.2	6.5e-34	116.2	1.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1003)
DDE_Tnp_1	PF01609.21	gi|297620722|ref|YP_003708859.1|	-	8.2e-05	22.3	1.5	0.00041	20.0	0.0	2.3	3	0	0	3	3	3	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.6	gi|297620722|ref|YP_003708859.1|	-	0.0074	16.5	0.0	0.0074	16.5	0.0	2.1	2	1	1	3	3	3	1	Transposase	DDE	domain
Put_DNA-bind_N	PF06971.13	gi|297620722|ref|YP_003708859.1|	-	0.27	11.3	1.5	9.3	6.4	0.0	3.1	3	0	0	3	3	3	0	Putative	DNA-binding	protein	N-terminus
DUF956	PF06115.11	gi|297620722|ref|YP_003708859.1|	-	1.4	8.7	4.7	2.1	8.1	1.0	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF956)
Transposase_mut	PF00872.18	gi|297620723|ref|YP_003708860.1|	-	3.5e-73	246.6	0.0	4.4e-73	246.3	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297620723|ref|YP_003708860.1|	-	1.4e-05	25.4	0.0	5.7e-05	23.5	0.0	2.1	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.6	gi|297620723|ref|YP_003708860.1|	-	0.026	14.7	0.0	0.49	10.6	0.0	2.6	1	1	1	2	2	2	0	DDE	domain
UbiA	PF01040.18	gi|297620725|ref|YP_003708862.1|	-	5.6e-54	183.1	23.8	6.7e-54	182.8	23.8	1.0	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Vma12	PF11712.8	gi|297620725|ref|YP_003708862.1|	-	2.4	8.2	6.8	0.98	9.5	0.1	2.6	3	0	0	3	3	3	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
COX4_pro	PF03626.14	gi|297620726|ref|YP_003708863.1|	-	1.1e-14	54.6	12.6	1.5e-14	54.2	12.1	1.5	1	1	1	2	2	2	1	Prokaryotic	Cytochrome	C	oxidase	subunit	IV
ABC2_membrane_3	PF12698.7	gi|297620726|ref|YP_003708863.1|	-	0.021	14.0	6.4	0.028	13.5	6.4	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
YibE_F	PF07907.11	gi|297620726|ref|YP_003708863.1|	-	0.026	14.0	6.0	0.032	13.7	6.0	1.1	1	0	0	1	1	1	0	YibE/F-like	protein
DUF2207	PF09972.9	gi|297620726|ref|YP_003708863.1|	-	0.077	11.7	2.3	0.11	11.3	2.3	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF1772	PF08592.11	gi|297620726|ref|YP_003708863.1|	-	0.12	12.7	3.7	0.47	10.8	3.7	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1772)
DUF2678	PF10856.8	gi|297620726|ref|YP_003708863.1|	-	0.15	12.0	4.3	0.19	11.7	4.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2678)
DUF3810	PF12725.7	gi|297620726|ref|YP_003708863.1|	-	0.37	10.1	2.9	0.4	10.0	2.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3810)
DUF2976	PF11190.8	gi|297620726|ref|YP_003708863.1|	-	0.39	10.5	8.6	0.44	10.4	2.4	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2976)
Wzy_C	PF04932.15	gi|297620726|ref|YP_003708863.1|	-	0.48	10.0	5.1	0.22	11.2	3.0	1.5	1	1	0	1	1	1	0	O-Antigen	ligase
TarH	PF02203.15	gi|297620726|ref|YP_003708863.1|	-	0.59	10.0	3.0	4.1	7.3	0.2	2.2	2	0	0	2	2	2	0	Tar	ligand	binding	domain	homologue
DUF3043	PF11241.8	gi|297620726|ref|YP_003708863.1|	-	0.74	9.8	3.7	0.47	10.5	2.1	1.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3043)
VirB3	PF05101.13	gi|297620726|ref|YP_003708863.1|	-	8.4	6.7	10.5	0.71	10.1	1.0	2.3	2	1	0	2	2	2	0	Type	IV	secretory	pathway,	VirB3-like	protein
COX3	PF00510.18	gi|297620727|ref|YP_003708864.1|	-	8.1e-10	39.0	24.0	1.3e-09	38.2	24.0	1.3	1	1	0	1	1	1	1	Cytochrome	c	oxidase	subunit	III
COX1	PF00115.20	gi|297620728|ref|YP_003708865.1|	-	6.9e-137	456.8	75.2	6.9e-137	456.8	75.2	1.7	2	0	0	2	2	2	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
TMEM61	PF15105.6	gi|297620728|ref|YP_003708865.1|	-	1.8	8.4	6.4	3.6	7.4	0.2	3.1	2	1	1	3	3	3	0	TMEM61	protein	family
COX_ARM	PF06481.14	gi|297620729|ref|YP_003708866.1|	-	2.1e-12	46.7	0.4	3.5e-12	46.0	0.4	1.4	1	0	0	1	1	1	1	COX	Aromatic	Rich	Motif
COX2	PF00116.20	gi|297620729|ref|YP_003708866.1|	-	6.8e-07	29.2	0.0	3.7e-06	26.8	0.0	2.0	1	1	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
DHHC	PF01529.20	gi|297620729|ref|YP_003708866.1|	-	0.034	14.2	0.7	0.034	14.2	0.7	1.7	1	1	0	1	1	1	0	DHHC	palmitoyltransferase
COX2_TM	PF02790.15	gi|297620729|ref|YP_003708866.1|	-	6.1	7.1	9.0	0.3	11.3	2.5	2.0	2	0	0	2	2	2	0	Cytochrome	C	oxidase	subunit	II,	transmembrane	domain
RhoGEF	PF00621.20	gi|297620730|ref|YP_003708867.1|	-	6.8e-17	62.3	0.3	6.8e-17	62.3	0.3	2.6	2	1	0	3	3	3	1	RhoGEF	domain
FliG_M	PF14841.6	gi|297620730|ref|YP_003708867.1|	-	0.045	14.0	0.2	0.25	11.6	0.2	2.3	1	0	0	1	1	1	0	FliG	middle	domain
M16C_assoc	PF08367.11	gi|297620731|ref|YP_003708868.1|	-	4.8e-63	212.6	0.2	1.1e-62	211.4	0.2	1.6	1	0	0	1	1	1	1	Peptidase	M16C	associated
Peptidase_M16_C	PF05193.21	gi|297620731|ref|YP_003708868.1|	-	9.8e-30	103.9	0.0	4.1e-23	82.3	0.0	3.5	3	0	0	3	3	3	2	Peptidase	M16	inactive	domain
Peptidase_M16	PF00675.20	gi|297620731|ref|YP_003708868.1|	-	4.9e-08	33.1	0.0	4e-07	30.1	0.0	2.4	2	0	0	2	2	2	1	Insulinase	(Peptidase	family	M16)
CDP-OH_P_transf	PF01066.21	gi|297620732|ref|YP_003708869.1|	-	8.3e-13	48.9	1.4	8.3e-13	48.9	1.4	3.1	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
GPI2	PF06432.11	gi|297620732|ref|YP_003708869.1|	-	0.51	9.7	11.0	0.045	13.2	4.0	2.3	1	1	1	2	2	2	0	Phosphatidylinositol	N-acetylglucosaminyltransferase
LexA_DNA_bind	PF01726.16	gi|297620733|ref|YP_003708870.1|	-	7.5e-20	70.5	0.0	1.3e-19	69.8	0.0	1.4	1	0	0	1	1	1	1	LexA	DNA	binding	domain
Peptidase_S24	PF00717.23	gi|297620733|ref|YP_003708870.1|	-	0.00021	21.2	0.0	0.00032	20.6	0.0	1.3	1	0	0	1	1	1	1	Peptidase	S24-like
HTH_20	PF12840.7	gi|297620733|ref|YP_003708870.1|	-	0.019	15.0	0.0	0.035	14.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|297620733|ref|YP_003708870.1|	-	0.074	13.0	0.0	0.18	11.8	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
PAP2	PF01569.21	gi|297620734|ref|YP_003708871.1|	-	9.9e-22	77.2	2.2	9.9e-22	77.2	2.2	2.0	1	1	1	2	2	2	1	PAP2	superfamily
PAP2_3	PF14378.6	gi|297620734|ref|YP_003708871.1|	-	1.8e-06	27.8	3.2	5e-06	26.3	2.8	1.9	1	1	0	1	1	1	1	PAP2	superfamily
CPP1-like	PF11833.8	gi|297620734|ref|YP_003708871.1|	-	0.0017	18.1	6.5	0.0059	16.3	1.6	2.3	2	0	0	2	2	2	2	Protein	CHAPERONE-LIKE	PROTEIN	OF	POR1-like
HPP	PF04982.13	gi|297620734|ref|YP_003708871.1|	-	0.018	15.2	1.5	0.16	12.1	0.2	2.4	2	0	0	2	2	2	0	HPP	family
UcrQ	PF02939.16	gi|297620734|ref|YP_003708871.1|	-	0.061	13.3	0.0	0.14	12.1	0.0	1.6	1	0	0	1	1	1	0	UcrQ	family
AA_permease	PF00324.21	gi|297620735|ref|YP_003708872.1|	-	2.6e-39	135.1	48.1	3.5e-39	134.7	48.1	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.6	gi|297620735|ref|YP_003708872.1|	-	9.7e-09	34.5	50.7	1.7e-08	33.8	50.7	1.3	1	0	0	1	1	1	1	Amino	acid	permease
SLC12	PF03522.15	gi|297620735|ref|YP_003708872.1|	-	2.2e-07	30.3	0.1	7.3e-07	28.6	0.0	1.7	1	1	1	2	2	2	1	Solute	carrier	family	12
ATP1G1_PLM_MAT8	PF02038.16	gi|297620735|ref|YP_003708872.1|	-	0.92	9.0	3.9	1.9	8.0	2.0	2.6	2	0	0	2	2	2	0	ATP1G1/PLM/MAT8	family
RmuC	PF02646.16	gi|297620736|ref|YP_003708873.1|	-	4.8e-97	324.6	2.3	4.8e-97	324.6	2.3	2.0	2	0	0	2	2	2	1	RmuC	family
AKNA	PF12443.8	gi|297620736|ref|YP_003708873.1|	-	0.0037	17.9	1.2	0.016	15.8	0.7	2.3	1	1	0	1	1	1	1	AT-hook-containing	transcription	factor
DUF2269	PF10027.9	gi|297620736|ref|YP_003708873.1|	-	0.051	13.6	0.1	0.13	12.3	0.1	1.6	1	0	0	1	1	1	0	Predicted	integral	membrane	protein	(DUF2269)
BAG6	PF12057.8	gi|297620736|ref|YP_003708873.1|	-	0.054	13.2	0.2	0.13	11.9	0.2	1.6	1	0	0	1	1	1	0	BCL2-associated	athanogene	6
DUF4460	PF14687.6	gi|297620736|ref|YP_003708873.1|	-	0.078	13.0	2.1	0.17	12.0	0.1	2.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4460)
SF-assemblin	PF06705.11	gi|297620736|ref|YP_003708873.1|	-	0.15	11.4	12.1	0.0095	15.3	5.0	2.3	3	0	0	3	3	3	0	SF-assemblin/beta	giardin
PP_kinase_N	PF13089.6	gi|297620736|ref|YP_003708873.1|	-	0.4	11.0	5.3	0.11	12.8	0.9	2.4	2	1	0	2	2	2	0	Polyphosphate	kinase	N-terminal	domain
ApoLp-III	PF07464.11	gi|297620736|ref|YP_003708873.1|	-	0.42	10.7	12.7	0.18	11.9	4.5	3.2	3	1	1	4	4	4	0	Apolipophorin-III	precursor	(apoLp-III)
DUF599	PF04654.12	gi|297620736|ref|YP_003708873.1|	-	0.55	9.6	2.1	0.97	8.8	2.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF599
SOAR	PF16533.5	gi|297620736|ref|YP_003708873.1|	-	6.8	6.7	11.0	19	5.3	7.5	3.0	2	1	0	2	2	2	0	STIM1	Orai1-activating	region
DUF3786	PF12654.7	gi|297620737|ref|YP_003708874.1|	-	0.0082	15.8	0.2	0.018	14.7	0.2	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3786)
ApbA	PF02558.16	gi|297620737|ref|YP_003708874.1|	-	0.015	15.0	0.4	3.5	7.3	0.0	2.4	2	1	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
DDE_Tnp_1_assoc	PF13808.6	gi|297620738|ref|YP_003708875.1|	-	3.8e-27	94.1	0.2	2e-26	91.9	0.1	2.1	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.21	gi|297620738|ref|YP_003708875.1|	-	1.6e-18	67.2	0.0	3.6e-18	66.0	0.0	1.5	1	1	0	1	1	1	1	Transposase	DDE	domain
DEK_C	PF08766.11	gi|297620738|ref|YP_003708875.1|	-	0.017	15.0	0.0	0.032	14.1	0.0	1.5	1	0	0	1	1	1	0	DEK	C	terminal	domain
DDE_Tnp_1_4	PF13701.6	gi|297620738|ref|YP_003708875.1|	-	0.05	11.9	0.0	3	6.0	0.0	2.1	2	0	0	2	2	2	0	Transposase	DDE	domain	group	1
DUF3566	PF12089.8	gi|297620740|ref|YP_003708877.1|	-	4.8e-07	30.2	1.3	4.8e-07	30.2	1.3	1.9	1	1	1	2	2	2	1	Transmembrane	domain	of	unknown	function	(DUF3566)
SPC25	PF06703.11	gi|297620740|ref|YP_003708877.1|	-	1.2	8.9	4.3	1.9	8.3	4.3	1.3	1	1	0	1	1	1	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
SH3_3	PF08239.11	gi|297620741|ref|YP_003708878.1|	-	6.2e-11	42.4	0.0	0.00014	22.0	0.0	2.8	2	0	0	2	2	2	2	Bacterial	SH3	domain
SH3_4	PF06347.13	gi|297620741|ref|YP_003708878.1|	-	0.00012	21.8	0.0	0.11	12.3	0.0	2.7	2	0	0	2	2	2	2	Bacterial	SH3	domain
DUF501	PF04417.12	gi|297620741|ref|YP_003708878.1|	-	0.13	12.1	0.6	0.22	11.3	0.6	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF501)
Fib_alpha	PF08702.10	gi|297620741|ref|YP_003708878.1|	-	2.9	8.1	4.7	1.3	9.2	1.6	1.8	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
SWIM	PF04434.17	gi|297620742|ref|YP_003708879.1|	-	0.061	13.0	0.5	0.14	11.8	0.5	1.7	1	0	0	1	1	1	0	SWIM	zinc	finger
zinc_ribbon_11	PF11682.8	gi|297620742|ref|YP_003708879.1|	-	0.13	12.2	1.9	0.31	11.1	0.8	1.9	1	1	1	2	2	2	0	Probable	zinc-ribbon
PhoH	PF02562.16	gi|297620743|ref|YP_003708880.1|	-	4.4e-55	186.3	0.0	6.1e-55	185.9	0.0	1.2	1	0	0	1	1	1	1	PhoH-like	protein
PIN_4	PF13638.6	gi|297620743|ref|YP_003708880.1|	-	1.5e-27	96.5	0.0	2.2e-27	95.9	0.0	1.3	1	0	0	1	1	1	1	PIN	domain
AAA_30	PF13604.6	gi|297620743|ref|YP_003708880.1|	-	1.7e-11	44.2	0.0	1.4e-10	41.2	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|297620743|ref|YP_003708880.1|	-	1.5e-06	28.5	0.1	1.6e-05	25.2	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.6	gi|297620743|ref|YP_003708880.1|	-	1.6e-06	28.6	0.0	0.0012	19.2	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_11	PF13086.6	gi|297620743|ref|YP_003708880.1|	-	0.0013	18.6	0.0	0.19	11.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.17	gi|297620743|ref|YP_003708880.1|	-	0.0025	17.6	0.0	0.0046	16.7	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Viral_helicase1	PF01443.18	gi|297620743|ref|YP_003708880.1|	-	0.0049	16.6	0.0	0.0089	15.8	0.0	1.4	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
AAA	PF00004.29	gi|297620743|ref|YP_003708880.1|	-	0.061	13.8	0.4	0.15	12.5	0.4	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|297620743|ref|YP_003708880.1|	-	0.17	12.3	0.1	0.56	10.6	0.0	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
DEAD	PF00270.29	gi|297620744|ref|YP_003708881.1|	-	2.2e-45	154.6	0.1	6.6e-45	153.0	0.0	1.7	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|297620744|ref|YP_003708881.1|	-	6.6e-33	113.4	1.9	8.4e-31	106.6	0.7	2.8	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
Helicase_RecD	PF05127.14	gi|297620744|ref|YP_003708881.1|	-	0.0026	17.6	0.0	0.091	12.6	0.0	2.4	1	1	1	2	2	2	1	Helicase
Porphobil_deam	PF01379.20	gi|297620744|ref|YP_003708881.1|	-	0.032	13.7	0.3	0.049	13.1	0.3	1.3	1	0	0	1	1	1	0	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
AAA_22	PF13401.6	gi|297620744|ref|YP_003708881.1|	-	0.035	14.4	0.0	0.1	12.8	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
UTP25	PF06862.12	gi|297620744|ref|YP_003708881.1|	-	0.18	10.5	2.8	25	3.5	0.2	3.6	2	1	1	4	4	4	0	Utp25,	U3	small	nucleolar	RNA-associated	SSU	processome	protein	25
TauE	PF01925.19	gi|297620745|ref|YP_003708882.1|	-	3.3e-11	43.3	25.8	2.2e-08	34.1	3.5	2.1	2	0	0	2	2	2	2	Sulfite	exporter	TauE/SafE
DUF5518	PF17647.1	gi|297620745|ref|YP_003708882.1|	-	0.0035	17.5	8.9	0.0035	17.5	8.9	3.2	3	1	1	4	4	4	1	Family	of	unknown	function	(DUF5518)
Fis1_TPR_C	PF14853.6	gi|297620746|ref|YP_003708883.1|	-	0.12	12.5	0.2	0.15	12.2	0.2	1.1	1	0	0	1	1	1	0	Fis1	C-terminal	tetratricopeptide	repeat
HI0933_like	PF03486.14	gi|297620747|ref|YP_003708884.1|	-	1.9e-115	385.8	0.0	2.2e-115	385.7	0.0	1.0	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_2	PF00890.24	gi|297620747|ref|YP_003708884.1|	-	8.4e-08	31.7	0.7	2.7e-05	23.4	0.4	3.0	3	0	0	3	3	3	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|297620747|ref|YP_003708884.1|	-	1.8e-07	30.7	0.0	8.2e-07	28.5	0.0	2.0	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|297620747|ref|YP_003708884.1|	-	1.3e-06	27.7	0.2	0.027	13.6	0.2	2.3	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
DAO	PF01266.24	gi|297620747|ref|YP_003708884.1|	-	2.7e-05	23.9	0.2	0.0096	15.5	0.1	2.6	1	1	1	3	3	3	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.6	gi|297620747|ref|YP_003708884.1|	-	0.0051	16.1	0.1	0.52	9.5	0.1	2.4	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.12	gi|297620747|ref|YP_003708884.1|	-	0.011	14.8	0.1	0.017	14.2	0.1	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Trp_halogenase	PF04820.14	gi|297620747|ref|YP_003708884.1|	-	0.014	14.3	0.2	0.022	13.6	0.2	1.3	1	0	0	1	1	1	0	Tryptophan	halogenase
FAD_oxidored	PF12831.7	gi|297620747|ref|YP_003708884.1|	-	0.025	14.0	0.1	0.037	13.4	0.1	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|297620747|ref|YP_003708884.1|	-	0.075	12.3	0.0	0.56	9.4	0.2	2.3	2	1	0	2	2	2	0	Thi4	family
AlaDh_PNT_C	PF01262.21	gi|297620747|ref|YP_003708884.1|	-	0.097	12.0	0.0	0.15	11.3	0.0	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox	PF00070.27	gi|297620747|ref|YP_003708884.1|	-	0.11	13.0	0.1	3.1	8.4	0.1	2.4	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Na_H_Exchanger	PF00999.21	gi|297620749|ref|YP_003708886.1|	-	7.8e-34	117.1	50.7	1.1e-33	116.6	50.7	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.18	gi|297620749|ref|YP_003708886.1|	-	3.8e-05	23.9	0.0	6.7e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	TrkA-N	domain
DUF829	PF05705.14	gi|297620749|ref|YP_003708886.1|	-	0.2	11.5	0.1	0.83	9.5	0.0	2.0	3	0	0	3	3	3	0	Eukaryotic	protein	of	unknown	function	(DUF829)
CN_hydrolase	PF00795.22	gi|297620751|ref|YP_003708888.1|	-	1e-26	93.9	0.0	1.5e-26	93.4	0.0	1.2	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
Acetyltransf_1	PF00583.25	gi|297620751|ref|YP_003708888.1|	-	1e-06	29.0	0.1	2.4e-06	27.8	0.1	1.6	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|297620751|ref|YP_003708888.1|	-	0.00065	20.1	0.1	0.0019	18.6	0.1	1.9	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
BON	PF04972.17	gi|297620752|ref|YP_003708889.1|	-	1.8e-09	37.8	0.0	2.2e-09	37.5	0.0	1.1	1	0	0	1	1	1	1	BON	domain
adh_short	PF00106.25	gi|297620753|ref|YP_003708890.1|	-	1.3e-39	135.7	0.0	1.8e-39	135.3	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|297620753|ref|YP_003708890.1|	-	9.6e-38	130.0	0.0	2.2e-37	128.8	0.0	1.5	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.10	gi|297620753|ref|YP_003708890.1|	-	8.9e-10	38.8	0.0	1.4e-09	38.1	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|297620753|ref|YP_003708890.1|	-	0.00061	19.3	0.0	0.0052	16.3	0.0	2.2	2	1	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
Glyco_tran_WecB	PF03808.13	gi|297620753|ref|YP_003708890.1|	-	0.0059	16.6	0.0	0.011	15.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	WecB/TagA/CpsF	family
NAD_binding_10	PF13460.6	gi|297620753|ref|YP_003708890.1|	-	0.024	14.6	0.0	0.048	13.6	0.0	1.5	1	1	0	1	1	1	0	NAD(P)H-binding
F420_oxidored	PF03807.17	gi|297620753|ref|YP_003708890.1|	-	0.046	14.3	0.1	0.1	13.2	0.1	1.5	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Sacchrp_dh_NADP	PF03435.18	gi|297620753|ref|YP_003708890.1|	-	0.091	13.0	0.0	0.33	11.2	0.0	1.8	2	0	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
DFP	PF04127.15	gi|297620753|ref|YP_003708890.1|	-	0.097	12.5	0.1	0.21	11.4	0.1	1.5	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
GDP_Man_Dehyd	PF16363.5	gi|297620753|ref|YP_003708890.1|	-	0.12	11.7	0.0	0.23	10.8	0.0	1.5	2	0	0	2	2	2	0	GDP-mannose	4,6	dehydratase
ADH_N	PF08240.12	gi|297620754|ref|YP_003708891.1|	-	1.7e-28	98.7	5.9	1.7e-28	98.7	5.9	1.6	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|297620754|ref|YP_003708891.1|	-	4.1e-25	88.3	0.0	6.9e-23	81.0	0.0	2.2	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.21	gi|297620754|ref|YP_003708891.1|	-	7.5e-06	25.4	0.2	1.4e-05	24.5	0.2	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
ADH_zinc_N_2	PF13602.6	gi|297620754|ref|YP_003708891.1|	-	7.1e-05	23.9	0.0	0.00014	23.0	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|297620754|ref|YP_003708891.1|	-	0.0001	21.7	0.0	0.00017	21.0	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.15	gi|297620754|ref|YP_003708891.1|	-	0.00082	19.6	0.1	0.0019	18.4	0.1	1.6	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.18	gi|297620754|ref|YP_003708891.1|	-	0.0021	17.9	0.1	0.004	17.0	0.1	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|297620754|ref|YP_003708891.1|	-	0.034	14.6	0.0	0.077	13.4	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Shikimate_DH	PF01488.20	gi|297620754|ref|YP_003708891.1|	-	0.049	13.7	0.0	0.11	12.6	0.0	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
ApbA	PF02558.16	gi|297620754|ref|YP_003708891.1|	-	0.076	12.6	0.1	0.17	11.5	0.1	1.6	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
TPP_enzyme_C	PF02775.21	gi|297620754|ref|YP_003708891.1|	-	0.081	12.7	0.9	0.29	10.9	0.6	2.1	2	1	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Cytochrome_CBB3	PF13442.6	gi|297620755|ref|YP_003708892.1|	-	7.7e-12	45.4	1.5	3.1e-07	30.6	0.0	3.2	2	1	1	3	3	3	2	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Cytochrom_C	PF00034.21	gi|297620755|ref|YP_003708892.1|	-	1e-08	36.2	9.3	2.5e-07	31.7	0.8	3.9	2	2	0	2	2	2	1	Cytochrome	c
Cytochrom_C550	PF14495.6	gi|297620755|ref|YP_003708892.1|	-	0.012	15.3	0.1	0.74	9.5	0.0	2.6	3	0	0	3	3	3	0	Cytochrome	c-550	domain
GSu_C4xC__C2xCH	PF09698.10	gi|297620755|ref|YP_003708892.1|	-	0.72	10.7	3.8	2.6	8.9	0.3	2.5	2	0	0	2	2	2	0	Geobacter	CxxxxCH...CXXCH	motif	(GSu_C4xC__C2xCH)
TauE	PF01925.19	gi|297620756|ref|YP_003708893.1|	-	7.7e-43	146.8	31.5	9.1e-43	146.6	31.5	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
7TMR-DISM_7TM	PF07695.11	gi|297620756|ref|YP_003708893.1|	-	0.0022	17.9	7.5	0.0022	17.9	7.5	2.3	1	1	1	2	2	2	1	7TM	diverse	intracellular	signalling
Adenine_deam_C	PF13382.6	gi|297620757|ref|YP_003708894.1|	-	8.7e-60	200.9	0.0	1.4e-59	200.3	0.0	1.3	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.20	gi|297620757|ref|YP_003708894.1|	-	1.2e-29	103.8	0.1	1.5e-27	96.9	0.0	2.6	2	1	0	2	2	2	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|297620757|ref|YP_003708894.1|	-	0.013	15.0	0.1	0.19	11.1	0.1	2.2	2	0	0	2	2	2	0	Amidohydrolase	family
DUF853	PF05872.12	gi|297620758|ref|YP_003708895.1|	-	5.5e-173	576.2	2.1	3e-171	570.4	2.1	2.0	1	1	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF853)
DUF87	PF01935.17	gi|297620758|ref|YP_003708895.1|	-	2.1e-10	41.1	2.6	1.9e-09	38.0	0.1	2.2	2	0	0	2	2	2	1	Helicase	HerA,	central	domain
AAA	PF00004.29	gi|297620758|ref|YP_003708895.1|	-	5.4e-08	33.3	3.4	0.038	14.4	0.0	3.6	3	0	0	3	3	3	3	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|297620758|ref|YP_003708895.1|	-	2.4e-07	31.1	1.8	0.15	12.3	0.2	3.6	3	1	0	3	3	3	2	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|297620758|ref|YP_003708895.1|	-	1.7e-05	24.0	2.7	0.00017	20.6	0.2	2.6	3	0	0	3	3	3	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ResIII	PF04851.15	gi|297620758|ref|YP_003708895.1|	-	5.4e-05	23.3	2.5	0.018	15.1	0.1	3.0	3	0	0	3	3	3	2	Type	III	restriction	enzyme,	res	subunit
AAA_16	PF13191.6	gi|297620758|ref|YP_003708895.1|	-	0.0001	22.7	2.4	0.26	11.6	0.1	3.1	3	2	1	4	4	4	2	AAA	ATPase	domain
Zot	PF05707.12	gi|297620758|ref|YP_003708895.1|	-	0.0012	18.5	0.2	0.0095	15.6	0.0	2.3	3	0	0	3	3	2	1	Zonular	occludens	toxin	(Zot)
CbiA	PF01656.23	gi|297620758|ref|YP_003708895.1|	-	0.0021	18.1	0.0	0.0036	17.4	0.0	1.7	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
FtsK_SpoIIIE	PF01580.18	gi|297620758|ref|YP_003708895.1|	-	0.0046	16.4	0.3	0.015	14.6	0.2	1.8	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_30	PF13604.6	gi|297620758|ref|YP_003708895.1|	-	0.0049	16.6	0.2	0.097	12.4	0.1	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.6	gi|297620758|ref|YP_003708895.1|	-	0.013	15.8	0.1	0.089	13.1	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.7	gi|297620758|ref|YP_003708895.1|	-	0.016	14.1	0.0	1.3	7.8	0.0	2.4	2	0	0	2	2	2	0	AAA-like	domain
NACHT	PF05729.12	gi|297620758|ref|YP_003708895.1|	-	0.064	13.2	0.7	13	5.7	0.3	2.5	2	0	0	2	2	2	0	NACHT	domain
DEAD	PF00270.29	gi|297620758|ref|YP_003708895.1|	-	0.25	11.1	2.0	15	5.3	1.7	3.1	2	1	0	2	2	2	0	DEAD/DEAH	box	helicase
AAA_5	PF07728.14	gi|297620758|ref|YP_003708895.1|	-	0.49	10.4	1.8	1.5	8.8	0.2	2.6	3	1	1	4	4	4	0	AAA	domain	(dynein-related	subfamily)
AAA_11	PF13086.6	gi|297620758|ref|YP_003708895.1|	-	0.54	10.0	3.0	5.7	6.6	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.6	gi|297620758|ref|YP_003708895.1|	-	0.7	10.4	8.9	3.7	8.0	0.6	2.6	2	1	0	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|297620758|ref|YP_003708895.1|	-	0.94	9.0	4.6	1.2	8.7	0.1	2.6	3	0	0	3	3	3	0	P-loop	containing	dynein	motor	region
Aldo_ket_red	PF00248.21	gi|297620759|ref|YP_003708896.1|	-	1.3e-76	257.6	0.0	1.5e-76	257.4	0.0	1.1	1	0	0	1	1	1	1	Aldo/keto	reductase	family
ELF	PF03317.13	gi|297620759|ref|YP_003708896.1|	-	0.031	14.3	0.0	1.2	9.1	0.0	2.5	2	0	0	2	2	2	0	ELF	protein
RHH_1	PF01402.21	gi|297620759|ref|YP_003708896.1|	-	0.41	10.7	3.4	6	7.0	0.0	3.1	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
HupH_C	PF04809.13	gi|297620760|ref|YP_003708897.1|	-	0.084	12.6	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	HupH	hydrogenase	expression	protein,	C-terminal	conserved	region
CBAH	PF02275.18	gi|297620761|ref|YP_003708898.1|	-	1e-70	238.9	0.0	1.7e-70	238.2	0.0	1.3	1	1	0	1	1	1	1	Linear	amide	C-N	hydrolases,	choloylglycine	hydrolase	family
AAT	PF03417.16	gi|297620761|ref|YP_003708898.1|	-	6.1e-11	42.4	0.0	9.5e-11	41.8	0.0	1.4	1	0	0	1	1	1	1	Acyl-coenzyme	A:6-aminopenicillanic	acid	acyl-transferase
Sortilin-Vps10	PF15902.5	gi|297620761|ref|YP_003708898.1|	-	0.08	11.7	0.1	0.1	11.4	0.1	1.1	1	0	0	1	1	1	0	Sortilin,	neurotensin	receptor	3,
Terpene_synth_C	PF03936.16	gi|297620762|ref|YP_003708899.1|	-	3.6e-05	23.3	0.1	5.6e-05	22.6	0.1	1.4	1	0	0	1	1	1	1	Terpene	synthase	family,	metal	binding	domain
Transposase_mut	PF00872.18	gi|297620764|ref|YP_003708901.1|	-	2.5e-68	230.7	0.0	3.1e-68	230.4	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297620764|ref|YP_003708901.1|	-	7.6e-05	23.1	0.0	0.00034	21.0	0.0	2.2	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.6	gi|297620764|ref|YP_003708901.1|	-	0.023	14.9	0.0	0.36	11.1	0.0	2.4	1	1	1	2	2	2	0	DDE	domain
DUF3298	PF11738.8	gi|297620765|ref|YP_003708902.1|	-	3.5e-07	31.2	0.0	5.9e-07	30.4	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3298)
DUF3892	PF13031.6	gi|297620766|ref|YP_003708903.1|	-	0.0024	18.5	0.0	0.0052	17.4	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3892)
EF-hand_11	PF08976.11	gi|297620766|ref|YP_003708903.1|	-	0.19	12.6	0.0	0.32	11.9	0.0	1.3	1	0	0	1	1	1	0	EF-hand	domain
YhcG_C	PF06250.11	gi|297620767|ref|YP_003708904.1|	-	4.3e-66	221.5	0.1	5.5e-66	221.2	0.1	1.1	1	0	0	1	1	1	1	YhcG	PDDEXK	nuclease	domain
HSDR_N_2	PF13588.6	gi|297620767|ref|YP_003708904.1|	-	0.074	13.1	0.0	0.14	12.2	0.0	1.5	1	0	0	1	1	1	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
DUF1016_N	PF17761.1	gi|297620768|ref|YP_003708905.1|	-	8.8e-33	113.4	0.1	1e-32	113.2	0.1	1.1	1	0	0	1	1	1	1	DUF1016	N-terminal	domain
RNA_pol_I_TF	PF04090.12	gi|297620768|ref|YP_003708905.1|	-	0.12	11.9	0.2	0.24	10.8	0.1	1.4	1	1	0	1	1	1	0	RNA	polymerase	I	specific	initiation	factor
Toprim_2	PF13155.6	gi|297620769|ref|YP_003708906.1|	-	0.00013	22.3	0.0	0.0002	21.7	0.0	1.3	1	0	0	1	1	1	1	Toprim-like
Toprim_N	PF08275.11	gi|297620769|ref|YP_003708906.1|	-	0.036	14.1	0.0	0.05	13.7	0.0	1.3	1	0	0	1	1	1	0	DNA	primase	catalytic	core,	N-terminal	domain
Toprim_4	PF13662.6	gi|297620769|ref|YP_003708906.1|	-	0.069	13.6	0.0	0.11	12.9	0.0	1.3	1	0	0	1	1	1	0	Toprim	domain
tRNA-synt_1	PF00133.22	gi|297620770|ref|YP_003708907.1|	-	2.1e-217	723.2	0.1	2.8e-217	722.7	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|297620770|ref|YP_003708907.1|	-	3.7e-29	101.6	0.0	7.7e-29	100.6	0.0	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|297620770|ref|YP_003708907.1|	-	4.6e-15	55.3	0.1	0.00042	19.2	0.0	3.9	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|297620770|ref|YP_003708907.1|	-	0.00065	19.1	0.0	0.0016	17.9	0.0	1.6	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
GvpG	PF05120.12	gi|297620770|ref|YP_003708907.1|	-	0.21	11.6	1.2	1.3	9.1	1.0	2.2	2	0	0	2	2	2	0	Gas	vesicle	protein	G
PhdYeFM_antitox	PF02604.19	gi|297620771|ref|YP_003708908.1|	-	3.2e-08	33.2	0.3	4e-08	32.9	0.3	1.1	1	0	0	1	1	1	1	Antitoxin	Phd_YefM,	type	II	toxin-antitoxin	system
Methyltransf_23	PF13489.6	gi|297620772|ref|YP_003708909.1|	-	1.5e-20	73.7	0.0	2.6e-20	72.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297620772|ref|YP_003708909.1|	-	5.7e-10	39.7	0.0	1.1e-09	38.8	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297620772|ref|YP_003708909.1|	-	6.6e-09	36.4	0.0	1.9e-08	35.0	0.0	1.8	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|297620772|ref|YP_003708909.1|	-	7.1e-09	35.6	0.0	1.3e-08	34.8	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297620772|ref|YP_003708909.1|	-	1.3e-05	25.8	0.0	3e-05	24.7	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
RNase_H_2	PF13482.6	gi|297620772|ref|YP_003708909.1|	-	0.0024	17.9	0.1	0.35	10.8	0.0	2.3	2	0	0	2	2	2	1	RNase_H	superfamily
NST1	PF13945.6	gi|297620772|ref|YP_003708909.1|	-	0.15	12.1	0.2	0.24	11.5	0.2	1.2	1	0	0	1	1	1	0	Salt	tolerance	down-regulator
Peptidase_S24	PF00717.23	gi|297620773|ref|YP_003708910.1|	-	9.4e-07	28.7	0.0	2.7e-06	27.2	0.0	1.8	1	1	0	1	1	1	1	Peptidase	S24-like
Peptidase_S26	PF10502.9	gi|297620773|ref|YP_003708910.1|	-	0.00086	19.1	0.0	0.0088	15.8	0.0	2.4	2	0	0	2	2	2	1	Signal	peptidase,	peptidase	S26
Gly_kinase	PF02595.15	gi|297620775|ref|YP_003708912.1|	-	6.4e-120	400.5	1.7	7.1e-120	400.3	1.7	1.0	1	0	0	1	1	1	1	Glycerate	kinase	family
NAPRTase_N	PF17767.1	gi|297620776|ref|YP_003708913.1|	-	4.5e-42	143.4	0.0	2.1e-41	141.2	0.0	1.9	2	0	0	2	2	2	1	Nicotinate	phosphoribosyltransferase	(NAPRTase)	N-terminal	domain
NAPRTase_C	PF17956.1	gi|297620776|ref|YP_003708913.1|	-	2.1e-14	53.9	0.0	3.6e-14	53.1	0.0	1.4	1	0	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	C-terminal	domain
NAPRTase	PF04095.16	gi|297620776|ref|YP_003708913.1|	-	1.5e-07	31.2	0.0	2.3e-07	30.7	0.0	1.2	1	0	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	(NAPRTase)	family
DUF2827	PF10933.8	gi|297620776|ref|YP_003708913.1|	-	0.038	12.7	0.0	0.071	11.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2827)
QRPTase_N	PF02749.16	gi|297620776|ref|YP_003708913.1|	-	0.16	12.1	0.0	0.57	10.3	0.0	1.9	2	0	0	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Isochorismatase	PF00857.20	gi|297620778|ref|YP_003708915.1|	-	6.5e-33	114.4	0.1	1.2e-32	113.5	0.1	1.4	1	1	0	1	1	1	1	Isochorismatase	family
DUF2717	PF10911.8	gi|297620778|ref|YP_003708915.1|	-	0.069	12.9	0.0	0.15	11.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2717)
SnoaL_2	PF12680.7	gi|297620779|ref|YP_003708916.1|	-	1.1e-07	32.5	0.0	1.4e-07	32.1	0.0	1.2	1	0	0	1	1	1	1	SnoaL-like	domain
SnoaL	PF07366.12	gi|297620779|ref|YP_003708916.1|	-	2.8e-05	23.9	0.1	5e-05	23.1	0.1	1.5	1	1	0	1	1	1	1	SnoaL-like	polyketide	cyclase
DUF4839	PF16127.5	gi|297620779|ref|YP_003708916.1|	-	0.12	12.4	0.0	0.19	11.8	0.0	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4839)
DUF167	PF02594.16	gi|297620780|ref|YP_003708917.1|	-	6.4e-26	90.3	0.6	7.4e-26	90.1	0.6	1.1	1	0	0	1	1	1	1	Uncharacterised	ACR,	YggU	family	COG1872
BRX_N	PF13713.6	gi|297620780|ref|YP_003708917.1|	-	0.021	14.6	0.2	0.035	13.9	0.2	1.3	1	0	0	1	1	1	0	Transcription	factor	BRX	N-terminal	domain
DUF2949	PF11165.8	gi|297620780|ref|YP_003708917.1|	-	0.083	13.2	0.1	0.12	12.8	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2949)
adh_short_C2	PF13561.6	gi|297620781|ref|YP_003708918.1|	-	1e-13	51.4	0.0	1.3e-13	51.1	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|297620781|ref|YP_003708918.1|	-	2.5e-11	43.4	0.4	4.3e-09	36.1	0.4	2.2	1	1	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|297620781|ref|YP_003708918.1|	-	2e-07	31.1	0.1	0.00046	20.2	0.0	2.1	1	1	1	2	2	2	2	KR	domain
Epimerase	PF01370.21	gi|297620781|ref|YP_003708918.1|	-	4.1e-06	26.4	0.0	5.3e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.17	gi|297620781|ref|YP_003708918.1|	-	3.3e-05	23.1	0.0	5.9e-05	22.3	0.0	1.4	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
DAGK_cat	PF00781.24	gi|297620781|ref|YP_003708918.1|	-	0.025	14.2	0.4	0.057	13.0	0.3	1.7	1	1	1	2	2	2	0	Diacylglycerol	kinase	catalytic	domain
DapB_N	PF01113.20	gi|297620781|ref|YP_003708918.1|	-	0.037	14.2	0.0	0.064	13.4	0.0	1.4	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
Semialdhyde_dh	PF01118.24	gi|297620781|ref|YP_003708918.1|	-	0.068	13.6	0.5	0.11	12.9	0.5	1.5	1	1	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
adh_short_C2	PF13561.6	gi|297620782|ref|YP_003708919.1|	-	3e-52	177.5	0.0	3.6e-52	177.3	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|297620782|ref|YP_003708919.1|	-	9.3e-50	168.8	0.0	1.2e-49	168.4	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|297620782|ref|YP_003708919.1|	-	1.7e-19	70.5	0.0	2.2e-19	70.1	0.0	1.1	1	0	0	1	1	1	1	KR	domain
3Beta_HSD	PF01073.19	gi|297620782|ref|YP_003708919.1|	-	0.019	14.0	0.0	0.031	13.3	0.0	1.3	1	0	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
DUF1776	PF08643.10	gi|297620782|ref|YP_003708919.1|	-	0.023	14.1	0.0	0.029	13.7	0.0	1.1	1	0	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
Epimerase	PF01370.21	gi|297620782|ref|YP_003708919.1|	-	0.061	12.8	0.1	0.11	11.9	0.1	1.5	1	1	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Ldh_1_N	PF00056.23	gi|297620782|ref|YP_003708919.1|	-	0.18	11.9	0.0	0.27	11.3	0.0	1.3	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
Cauli_VI	PF01693.16	gi|297620783|ref|YP_003708920.1|	-	0.012	15.9	0.0	0.034	14.4	0.0	1.8	1	0	0	1	1	1	0	Caulimovirus	viroplasmin
Kinetochor_Ybp2	PF08568.10	gi|297620783|ref|YP_003708920.1|	-	0.058	11.9	0.0	0.068	11.6	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family,	YAP/Alf4/glomulin
ODAPH	PF15848.5	gi|297620783|ref|YP_003708920.1|	-	0.13	12.8	0.1	0.22	12.0	0.1	1.3	1	0	0	1	1	1	0	Odontogenesis	associated	phosphoprotein
DUF3931	PF13082.6	gi|297620783|ref|YP_003708920.1|	-	0.13	12.4	0.2	0.22	11.7	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3931)
rve	PF00665.26	gi|297620784|ref|YP_003708921.1|	-	4.4e-21	75.3	0.0	6.4e-21	74.7	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297620784|ref|YP_003708921.1|	-	3.9e-15	55.7	0.8	8.4e-15	54.7	0.8	1.6	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.6	gi|297620784|ref|YP_003708921.1|	-	1.9e-12	46.8	0.2	3.7e-12	45.8	0.2	1.5	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297620784|ref|YP_003708921.1|	-	0.0011	19.5	0.4	0.0011	19.5	0.4	2.4	3	0	0	3	3	3	1	Homeodomain-like	domain
rve_2	PF13333.6	gi|297620784|ref|YP_003708921.1|	-	0.01	16.0	1.0	0.021	15.0	1.0	1.5	1	0	0	1	1	1	0	Integrase	core	domain
PsiA	PF06952.11	gi|297620784|ref|YP_003708921.1|	-	0.029	13.6	3.5	0.75	9.0	0.0	2.3	2	1	0	2	2	2	0	PsiA	protein
HTH_Tnp_1	PF01527.20	gi|297620785|ref|YP_003708922.1|	-	3.2e-12	46.6	0.5	4.1e-12	46.2	0.5	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.6	gi|297620785|ref|YP_003708922.1|	-	0.00013	22.1	0.0	0.0002	21.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|297620785|ref|YP_003708922.1|	-	0.00035	20.3	0.0	0.00059	19.6	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
DDE_Tnp_1	PF01609.21	gi|297620786|ref|YP_003708923.1|	-	4e-14	52.8	0.2	5.4e-14	52.3	0.2	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DUF4096	PF13340.6	gi|297620788|ref|YP_003708925.1|	-	2.8e-30	104.3	0.9	3.4e-30	104.1	0.9	1.1	1	0	0	1	1	1	1	Putative	transposase	of	IS4/5	family	(DUF4096)
DUF4471	PF14740.6	gi|297620788|ref|YP_003708925.1|	-	0.15	11.3	0.4	0.24	10.6	0.4	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4471)
Transposase_mut	PF00872.18	gi|297620789|ref|YP_003708926.1|	-	4.8e-71	239.6	0.0	5.8e-71	239.3	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297620789|ref|YP_003708926.1|	-	1.5e-05	25.4	0.0	5e-05	23.6	0.0	2.0	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.6	gi|297620789|ref|YP_003708926.1|	-	0.04	14.1	0.1	0.46	10.7	0.1	2.7	2	1	1	3	3	3	0	DDE	domain
Pirin_C_2	PF17954.1	gi|297620790|ref|YP_003708927.1|	-	1e-05	25.6	0.0	1e-05	25.6	0.0	1.0	1	0	0	1	1	1	1	Quercetinase	C-terminal	cupin	domain
YXWGXW	PF12779.7	gi|297620791|ref|YP_003708928.1|	-	1.6	9.0	73.2	0.07	13.3	7.4	6.7	5	1	1	6	6	6	0	YXWGXW	repeat	(2	copies)
DDE_Tnp_IS1	PF03400.13	gi|297620793|ref|YP_003708930.1|	-	2.2e-07	31.2	0.1	2.3e-07	31.2	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.6	gi|297620793|ref|YP_003708930.1|	-	0.0018	18.0	0.1	0.0024	17.6	0.1	1.3	1	0	0	1	1	1	1	Integrase	core	domain
zf-SAP30	PF13866.6	gi|297620793|ref|YP_003708930.1|	-	0.035	14.2	1.5	0.15	12.2	1.5	1.9	1	1	0	1	1	1	0	SAP30	zinc-finger
DDE_Tnp_IS1	PF03400.13	gi|297620794|ref|YP_003708931.1|	-	2e-11	44.3	0.1	5.4e-11	42.9	0.1	1.6	1	1	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.13	gi|297620794|ref|YP_003708931.1|	-	0.00071	19.2	2.7	0.0011	18.7	2.7	1.3	1	0	0	1	1	1	1	InsA	N-terminal	domain
DDE_Tnp_IS240	PF13610.6	gi|297620794|ref|YP_003708931.1|	-	0.0021	18.3	0.0	0.0036	17.5	0.0	1.5	1	0	0	1	1	1	1	DDE	domain
DUF908	PF06012.12	gi|297620794|ref|YP_003708931.1|	-	0.04	13.3	0.0	0.054	12.9	0.0	1.1	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF908)
Zn-ribbon_8	PF09723.10	gi|297620794|ref|YP_003708931.1|	-	0.19	11.9	1.9	5.4	7.2	0.3	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|297620794|ref|YP_003708931.1|	-	0.64	10.7	5.8	0.7	10.6	0.7	2.8	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
ABC_tran	PF00005.27	gi|297620795|ref|YP_003708932.1|	-	4.3e-54	182.7	1.4	3.1e-27	95.8	0.0	3.3	4	0	0	4	4	3	2	ABC	transporter
AAA_21	PF13304.6	gi|297620795|ref|YP_003708932.1|	-	3.5e-16	59.9	12.0	0.00047	20.1	0.1	4.5	2	2	2	4	4	4	4	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
ABC_tran_CTD	PF16326.5	gi|297620795|ref|YP_003708932.1|	-	8.1e-12	45.2	11.3	3.1e-11	43.4	11.3	2.0	1	0	0	1	1	1	1	ABC	transporter	C-terminal	domain
SMC_N	PF02463.19	gi|297620795|ref|YP_003708932.1|	-	5.7e-07	29.2	0.7	1.2	8.5	0.0	4.3	3	1	0	4	4	4	1	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|297620795|ref|YP_003708932.1|	-	3.7e-06	27.0	1.7	0.014	15.3	0.1	2.5	2	0	0	2	2	2	2	RsgA	GTPase
AAA_23	PF13476.6	gi|297620795|ref|YP_003708932.1|	-	1.1e-05	26.0	17.6	0.03	14.8	0.0	3.8	4	0	0	4	4	4	2	AAA	domain
AAA_29	PF13555.6	gi|297620795|ref|YP_003708932.1|	-	1.5e-05	24.7	5.2	0.026	14.3	0.2	2.7	3	0	0	3	3	2	2	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|297620795|ref|YP_003708932.1|	-	1.6e-05	24.8	6.5	0.083	12.6	0.2	4.3	3	2	1	4	4	4	2	AAA	ATPase	domain
AAA_18	PF13238.6	gi|297620795|ref|YP_003708932.1|	-	2.5e-05	24.8	0.3	0.41	11.2	0.1	3.0	2	1	0	2	2	2	2	AAA	domain
MMR_HSR1	PF01926.23	gi|297620795|ref|YP_003708932.1|	-	8.4e-05	22.6	0.1	0.53	10.4	0.0	2.8	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
AAA_24	PF13479.6	gi|297620795|ref|YP_003708932.1|	-	0.00014	21.7	0.8	0.52	10.0	0.1	3.1	3	0	0	3	3	3	2	AAA	domain
AAA_30	PF13604.6	gi|297620795|ref|YP_003708932.1|	-	0.0004	20.2	0.0	0.15	11.8	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|297620795|ref|YP_003708932.1|	-	0.00041	20.5	0.2	3.5	7.8	0.0	3.4	3	0	0	3	3	3	1	AAA	domain
MeaB	PF03308.16	gi|297620795|ref|YP_003708932.1|	-	0.00043	19.3	1.8	0.016	14.2	0.0	2.5	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
ATP-synt_ab	PF00006.25	gi|297620795|ref|YP_003708932.1|	-	0.00085	19.0	0.0	0.22	11.1	0.0	2.2	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NACHT	PF05729.12	gi|297620795|ref|YP_003708932.1|	-	0.0012	18.8	0.3	0.66	9.9	0.0	2.6	2	0	0	2	2	2	1	NACHT	domain
AAA_16	PF13191.6	gi|297620795|ref|YP_003708932.1|	-	0.0022	18.4	2.4	3.1	8.2	0.0	3.5	3	1	0	3	3	3	1	AAA	ATPase	domain
AAA_28	PF13521.6	gi|297620795|ref|YP_003708932.1|	-	0.0024	18.2	0.0	3.5	7.8	0.0	2.9	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|297620795|ref|YP_003708932.1|	-	0.0042	17.5	2.3	1.1	9.6	0.3	3.5	3	1	0	3	3	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
KAP_NTPase	PF07693.14	gi|297620795|ref|YP_003708932.1|	-	0.0043	16.3	0.0	0.22	10.7	0.0	2.4	2	0	0	2	2	2	1	KAP	family	P-loop	domain
T2SSE	PF00437.20	gi|297620795|ref|YP_003708932.1|	-	0.0061	15.7	0.3	0.23	10.5	0.0	2.3	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
RNA_helicase	PF00910.22	gi|297620795|ref|YP_003708932.1|	-	0.0066	16.8	0.3	4.7	7.7	0.0	2.7	2	0	0	2	2	2	0	RNA	helicase
Roc	PF08477.13	gi|297620795|ref|YP_003708932.1|	-	0.0081	16.4	1.4	7.9	6.7	0.0	3.1	3	0	0	3	3	3	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_13	PF13166.6	gi|297620795|ref|YP_003708932.1|	-	0.0085	14.8	5.3	0.85	8.2	0.0	3.2	3	0	0	3	3	3	1	AAA	domain
Dynamin_N	PF00350.23	gi|297620795|ref|YP_003708932.1|	-	0.009	16.1	0.4	1	9.4	0.0	2.8	2	1	0	2	2	2	1	Dynamin	family
Mg_chelatase	PF01078.21	gi|297620795|ref|YP_003708932.1|	-	0.014	14.8	1.0	3.5	6.9	0.0	2.7	3	0	0	3	3	3	0	Magnesium	chelatase,	subunit	ChlI
ABC_tran_Xtn	PF12848.7	gi|297620795|ref|YP_003708932.1|	-	0.015	15.3	2.4	0.015	15.3	2.4	2.6	3	0	0	3	3	2	0	ABC	transporter
AAA_22	PF13401.6	gi|297620795|ref|YP_003708932.1|	-	0.019	15.3	3.1	3.7	7.8	0.0	3.4	3	1	0	3	3	2	0	AAA	domain
MobB	PF03205.14	gi|297620795|ref|YP_003708932.1|	-	0.023	14.6	0.7	0.37	10.7	0.1	2.5	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
cobW	PF02492.19	gi|297620795|ref|YP_003708932.1|	-	0.024	14.2	1.1	6.3	6.4	0.0	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_14	PF13173.6	gi|297620795|ref|YP_003708932.1|	-	0.024	14.6	0.1	22	5.1	0.0	3.5	3	0	0	3	3	3	0	AAA	domain
PduV-EutP	PF10662.9	gi|297620795|ref|YP_003708932.1|	-	0.028	14.2	1.0	3.9	7.2	0.3	2.4	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
DUF87	PF01935.17	gi|297620795|ref|YP_003708932.1|	-	0.035	14.2	7.2	0.089	12.9	0.0	3.2	3	1	1	4	4	3	0	Helicase	HerA,	central	domain
AAA_5	PF07728.14	gi|297620795|ref|YP_003708932.1|	-	0.036	14.1	1.4	1.6	8.7	0.0	2.6	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DLIC	PF05783.11	gi|297620795|ref|YP_003708932.1|	-	0.046	12.5	0.6	5.2	5.8	0.1	2.4	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
AAA_7	PF12775.7	gi|297620795|ref|YP_003708932.1|	-	0.052	13.1	1.2	6.5	6.2	0.4	2.3	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
AAA_25	PF13481.6	gi|297620795|ref|YP_003708932.1|	-	0.052	13.1	0.6	9.7	5.7	0.1	2.8	2	0	0	2	2	2	0	AAA	domain
Rad17	PF03215.15	gi|297620795|ref|YP_003708932.1|	-	0.065	13.1	0.4	7.9	6.4	0.0	2.6	2	0	0	2	2	2	0	Rad17	P-loop	domain
NTPase_1	PF03266.15	gi|297620795|ref|YP_003708932.1|	-	0.073	13.0	0.6	14	5.5	0.4	3.2	3	0	0	3	3	3	0	NTPase
Septin	PF00735.18	gi|297620795|ref|YP_003708932.1|	-	0.096	11.9	0.0	7.4	5.8	0.0	2.3	2	0	0	2	2	2	0	Septin
Arf	PF00025.21	gi|297620795|ref|YP_003708932.1|	-	0.12	11.9	1.3	5.5	6.4	0.0	2.6	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
TsaE	PF02367.17	gi|297620795|ref|YP_003708932.1|	-	0.14	12.1	1.2	18	5.3	0.0	2.5	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
NB-ARC	PF00931.22	gi|297620795|ref|YP_003708932.1|	-	0.87	8.7	3.7	7.6	5.6	0.6	2.6	2	0	0	2	2	2	0	NB-ARC	domain
DDE_Tnp_ISL3	PF01610.17	gi|297620795|ref|YP_003708932.1|	-	1.8	8.2	6.6	7.8	6.1	1.9	2.2	2	0	0	2	2	2	0	Transposase
AAA_27	PF13514.6	gi|297620795|ref|YP_003708932.1|	-	7.8	6.0	9.5	3.1	7.3	0.0	3.5	4	1	1	5	5	4	0	AAA	domain
SRP54	PF00448.22	gi|297620795|ref|YP_003708932.1|	-	9.6	5.8	6.4	7.6	6.1	0.1	3.2	4	0	0	4	4	4	0	SRP54-type	protein,	GTPase	domain
LysR_substrate	PF03466.20	gi|297620796|ref|YP_003708933.1|	-	1.9e-32	112.4	0.0	2.4e-32	112.0	0.0	1.1	1	0	0	1	1	1	1	LysR	substrate	binding	domain
HTH_1	PF00126.27	gi|297620796|ref|YP_003708933.1|	-	1.9e-18	66.1	1.1	3.9e-18	65.2	1.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
MarR_2	PF12802.7	gi|297620796|ref|YP_003708933.1|	-	0.0025	17.6	0.4	0.017	15.0	0.1	2.3	2	0	0	2	2	2	1	MarR	family
Fe_dep_repress	PF01325.19	gi|297620796|ref|YP_003708933.1|	-	0.0053	16.9	0.1	0.21	11.8	0.1	2.6	3	0	0	3	3	3	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_30	PF13556.6	gi|297620796|ref|YP_003708933.1|	-	0.011	15.5	0.0	0.024	14.4	0.0	1.6	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
HTH_24	PF13412.6	gi|297620796|ref|YP_003708933.1|	-	0.012	15.1	0.1	0.088	12.4	0.1	2.4	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.12	gi|297620796|ref|YP_003708933.1|	-	0.023	14.7	0.5	0.056	13.4	0.1	1.8	2	0	0	2	2	2	0	HTH	domain
HTH_5	PF01022.20	gi|297620796|ref|YP_003708933.1|	-	0.042	13.7	0.2	1.3	8.9	0.0	2.5	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
PatG_D	PF18047.1	gi|297620796|ref|YP_003708933.1|	-	0.1	13.0	0.0	0.25	11.8	0.0	1.6	2	0	0	2	2	2	0	PatG	Domain
MFS_1	PF07690.16	gi|297620797|ref|YP_003708934.1|	-	1.1e-45	156.2	30.2	1.8e-45	155.4	30.2	1.3	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|297620797|ref|YP_003708934.1|	-	3e-09	36.3	7.1	3e-09	36.3	7.1	2.5	1	1	1	2	2	2	1	Sugar	(and	other)	transporter
MFS_4	PF06779.14	gi|297620797|ref|YP_003708934.1|	-	1.3e-05	24.7	2.2	1.3e-05	24.7	2.2	2.1	2	0	0	2	2	2	1	Uncharacterised	MFS-type	transporter	YbfB
MFS_3	PF05977.13	gi|297620797|ref|YP_003708934.1|	-	0.00077	18.0	12.7	0.0011	17.5	12.7	1.3	1	0	0	1	1	1	1	Transmembrane	secretion	effector
DUF1648	PF07853.11	gi|297620797|ref|YP_003708934.1|	-	0.44	10.2	0.0	0.44	10.2	0.0	3.7	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1648)
DUF1418	PF07214.12	gi|297620797|ref|YP_003708934.1|	-	0.77	9.7	4.2	5.2	7.0	0.4	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1418)
DUF2721	PF11026.8	gi|297620797|ref|YP_003708934.1|	-	4.4	7.2	0.0	4.4	7.2	0.0	4.5	4	1	0	4	4	4	0	Protein	of	unknown	function	(DUF2721)
Cyclase	PF04199.13	gi|297620798|ref|YP_003708935.1|	-	9.9e-32	110.0	0.0	1.2e-31	109.8	0.0	1.1	1	0	0	1	1	1	1	Putative	cyclase
DUF21	PF01595.20	gi|297620799|ref|YP_003708936.1|	-	1.9e-33	115.6	0.7	2.9e-33	115.1	0.7	1.2	1	0	0	1	1	1	1	Cyclin	M	transmembrane	N-terminal	domain
CBS	PF00571.28	gi|297620799|ref|YP_003708936.1|	-	2.2e-10	40.8	0.0	0.00025	21.4	0.0	2.6	2	0	0	2	2	2	2	CBS	domain
RtcB	PF01139.17	gi|297620800|ref|YP_003708937.1|	-	4.3e-139	464.2	0.0	4.9e-139	464.1	0.0	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
Cytochrome_CBB3	PF13442.6	gi|297620800|ref|YP_003708937.1|	-	0.01	16.1	0.0	0.72	10.2	0.0	2.6	2	0	0	2	2	2	0	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Archease	PF01951.16	gi|297620801|ref|YP_003708938.1|	-	8e-05	22.9	0.5	0.00018	21.7	0.5	1.7	1	1	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
NUDIX	PF00293.28	gi|297620802|ref|YP_003708939.1|	-	1e-15	57.9	0.0	1.2e-15	57.7	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
NUDIX	PF00293.28	gi|297620803|ref|YP_003708940.1|	-	2.9e-22	79.1	0.0	3.8e-22	78.7	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.6	gi|297620803|ref|YP_003708940.1|	-	3e-05	24.0	0.0	5.2e-05	23.2	0.0	1.4	1	1	0	1	1	1	1	NUDIX	domain
ADH_zinc_N	PF00107.26	gi|297620804|ref|YP_003708941.1|	-	1e-10	41.7	0.0	2.7e-10	40.3	0.0	1.7	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.12	gi|297620804|ref|YP_003708941.1|	-	8.5e-08	32.1	0.0	1.1e-05	25.3	0.0	2.4	1	1	1	2	2	2	2	Alcohol	dehydrogenase	GroES-like	domain
DUF3649	PF12365.8	gi|297620806|ref|YP_003708943.1|	-	0.92	9.3	3.4	1.6	8.5	3.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3649)
Perilipin	PF03036.16	gi|297620807|ref|YP_003708944.1|	-	0.017	14.2	0.4	0.17	10.9	0.1	2.0	1	1	1	2	2	2	0	Perilipin	family
DUF932	PF06067.11	gi|297620807|ref|YP_003708944.1|	-	0.024	14.4	0.5	0.4	10.4	0.8	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF932)
DUF2951	PF11166.8	gi|297620807|ref|YP_003708944.1|	-	2.3	8.5	5.7	0.8	10.0	1.0	2.4	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2951)
Lysine_decarbox	PF03641.14	gi|297620808|ref|YP_003708945.1|	-	0.0025	17.9	0.0	0.0049	17.0	0.0	1.5	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
DUF1622	PF07784.11	gi|297620810|ref|YP_003708947.1|	-	3.9e-27	94.0	0.1	6.5e-27	93.3	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1622)
Phage_holin_2_1	PF04971.12	gi|297620810|ref|YP_003708947.1|	-	0.2	11.7	2.9	0.29	11.2	0.2	2.2	2	0	0	2	2	2	0	Bacteriophage	P21	holin	S
UPF0160	PF03690.13	gi|297620811|ref|YP_003708948.1|	-	6.5e-55	187.0	0.0	5.3e-54	184.0	0.0	1.9	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0160)
HIT	PF01230.23	gi|297620812|ref|YP_003708949.1|	-	6.3e-26	91.0	0.0	7.4e-26	90.8	0.0	1.1	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.8	gi|297620812|ref|YP_003708949.1|	-	4.8e-22	78.6	0.0	5.6e-22	78.4	0.0	1.0	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
GalP_UDP_tr_C	PF02744.17	gi|297620812|ref|YP_003708949.1|	-	0.0051	16.6	0.0	0.006	16.3	0.0	1.1	1	0	0	1	1	1	1	Galactose-1-phosphate	uridyl	transferase,	C-terminal	domain
Isochorismatase	PF00857.20	gi|297620813|ref|YP_003708950.1|	-	5.5e-27	95.1	0.0	6.6e-27	94.8	0.0	1.1	1	0	0	1	1	1	1	Isochorismatase	family
HEAT_2	PF13646.6	gi|297620814|ref|YP_003708951.1|	-	4.3e-24	84.7	12.2	2.1e-06	28.0	0.7	6.3	3	2	3	6	6	6	5	HEAT	repeats
HEAT	PF02985.22	gi|297620814|ref|YP_003708951.1|	-	6.9e-08	32.1	11.0	0.019	15.2	0.0	7.6	9	0	0	9	9	9	2	HEAT	repeat
Cnd1	PF12717.7	gi|297620814|ref|YP_003708951.1|	-	6.2e-07	29.6	1.3	0.0016	18.5	0.0	3.9	3	1	0	3	3	3	2	non-SMC	mitotic	condensation	complex	subunit	1
Cohesin_HEAT	PF12765.7	gi|297620814|ref|YP_003708951.1|	-	0.0018	18.5	0.6	0.68	10.3	0.9	3.1	2	0	0	2	2	2	1	HEAT	repeat	associated	with	sister	chromatid	cohesion
Adaptin_N	PF01602.20	gi|297620814|ref|YP_003708951.1|	-	0.0032	16.1	2.5	0.98	7.9	0.0	2.9	2	1	1	4	4	4	2	Adaptin	N	terminal	region
IFRD	PF05004.13	gi|297620814|ref|YP_003708951.1|	-	0.07	12.2	4.4	0.034	13.3	1.5	1.9	2	1	0	2	2	2	0	Interferon-related	developmental	regulator	(IFRD)
HEAT_EZ	PF13513.6	gi|297620814|ref|YP_003708951.1|	-	0.092	13.3	12.7	1.3	9.7	0.2	6.3	6	1	0	7	7	7	0	HEAT-like	repeat
NMT1	PF09084.11	gi|297620815|ref|YP_003708952.1|	-	1.1e-52	179.1	0.0	1.7e-52	178.5	0.0	1.3	1	0	0	1	1	1	1	NMT1/THI5	like
BPD_transp_1	PF00528.22	gi|297620815|ref|YP_003708952.1|	-	3e-22	79.2	14.3	6.7e-22	78.1	14.3	1.5	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
VitK2_biosynth	PF02621.14	gi|297620815|ref|YP_003708952.1|	-	0.0085	15.6	0.0	0.13	11.8	0.0	2.1	2	0	0	2	2	2	1	Menaquinone	biosynthesis
SBP_bac_3	PF00497.20	gi|297620815|ref|YP_003708952.1|	-	0.016	14.6	0.0	0.051	13.0	0.0	1.7	1	1	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	3
NMT1_2	PF13379.6	gi|297620815|ref|YP_003708952.1|	-	0.2	11.3	0.0	0.33	10.6	0.0	1.3	1	0	0	1	1	1	0	NMT1-like	family
Raco_middle	PF17651.1	gi|297620816|ref|YP_003708953.1|	-	0.93	9.2	2.9	2.2	8.0	0.6	2.6	2	0	0	2	2	2	0	RACo	middle	region
GvpL_GvpF	PF06386.11	gi|297620816|ref|YP_003708953.1|	-	1	9.3	6.0	0.17	11.8	1.2	2.1	2	0	0	2	2	2	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
CotJB	PF12652.7	gi|297620816|ref|YP_003708953.1|	-	1.3	9.3	5.0	20	5.5	0.2	4.4	3	1	1	4	4	4	0	CotJB	protein
ABC_tran	PF00005.27	gi|297620817|ref|YP_003708954.1|	-	7.7e-25	88.0	0.1	1.7e-24	86.9	0.1	1.6	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|297620817|ref|YP_003708954.1|	-	1.6e-12	47.8	8.9	1.6e-09	38.0	1.8	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|297620817|ref|YP_003708954.1|	-	1.4e-06	28.6	0.5	3.3e-06	27.4	0.5	1.6	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.19	gi|297620817|ref|YP_003708954.1|	-	2.5e-06	27.1	1.0	0.00077	19.0	0.2	2.1	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|297620817|ref|YP_003708954.1|	-	7.1e-06	26.0	2.8	0.0015	18.3	0.1	2.1	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_16	PF13191.6	gi|297620817|ref|YP_003708954.1|	-	7.3e-05	23.2	0.1	0.00011	22.7	0.1	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_30	PF13604.6	gi|297620817|ref|YP_003708954.1|	-	0.0022	17.8	0.0	0.006	16.3	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|297620817|ref|YP_003708954.1|	-	0.0022	17.7	0.1	0.0046	16.7	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|297620817|ref|YP_003708954.1|	-	0.0035	17.3	0.1	0.0076	16.2	0.1	1.6	1	0	0	1	1	1	1	RsgA	GTPase
Pox_A32	PF04665.12	gi|297620817|ref|YP_003708954.1|	-	0.0055	16.2	1.5	0.067	12.6	0.2	2.2	2	1	0	2	2	2	1	Poxvirus	A32	protein
AAA_18	PF13238.6	gi|297620817|ref|YP_003708954.1|	-	0.0061	17.1	0.1	0.017	15.7	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|297620817|ref|YP_003708954.1|	-	0.011	15.8	0.0	0.032	14.4	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|297620817|ref|YP_003708954.1|	-	0.013	15.8	1.0	0.17	12.2	1.0	2.2	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|297620817|ref|YP_003708954.1|	-	0.017	15.6	0.1	0.056	13.9	0.1	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|297620817|ref|YP_003708954.1|	-	0.045	12.9	0.0	0.1	11.8	0.0	1.6	1	1	0	1	1	1	0	NB-ARC	domain
AAA_5	PF07728.14	gi|297620817|ref|YP_003708954.1|	-	0.046	13.7	0.2	0.12	12.3	0.1	1.8	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_13	PF13166.6	gi|297620817|ref|YP_003708954.1|	-	0.05	12.3	1.0	1.1	7.8	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|297620817|ref|YP_003708954.1|	-	0.052	13.5	4.6	0.19	11.7	4.6	2.0	1	1	0	1	1	1	0	NACHT	domain
SbcCD_C	PF13558.6	gi|297620817|ref|YP_003708954.1|	-	0.064	13.5	0.0	0.13	12.5	0.0	1.6	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
TsaE	PF02367.17	gi|297620817|ref|YP_003708954.1|	-	0.064	13.3	0.1	0.12	12.4	0.1	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
NTPase_1	PF03266.15	gi|297620817|ref|YP_003708954.1|	-	0.074	13.0	0.0	1.9	8.3	0.0	2.3	2	0	0	2	2	2	0	NTPase
AAA_25	PF13481.6	gi|297620817|ref|YP_003708954.1|	-	0.077	12.6	0.8	0.21	11.2	0.8	1.9	1	1	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.17	gi|297620817|ref|YP_003708954.1|	-	0.088	12.6	0.0	0.43	10.3	0.0	2.0	2	1	1	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
AAA_24	PF13479.6	gi|297620817|ref|YP_003708954.1|	-	0.14	11.8	0.1	0.23	11.2	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|297620817|ref|YP_003708954.1|	-	0.14	12.6	0.6	0.14	12.6	0.6	1.9	2	1	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.21	gi|297620817|ref|YP_003708954.1|	-	0.17	11.2	0.1	0.42	10.0	0.0	1.6	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.6	gi|297620817|ref|YP_003708954.1|	-	0.24	11.6	0.4	0.55	10.5	0.3	1.7	1	1	0	2	2	2	0	AAA	domain
Peptidase_M24	PF00557.24	gi|297620818|ref|YP_003708955.1|	-	9.4e-36	123.5	0.0	1.2e-35	123.1	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Trp_Tyr_perm	PF03222.13	gi|297620819|ref|YP_003708956.1|	-	3e-86	289.9	35.0	3.5e-86	289.7	35.0	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Aa_trans	PF01490.18	gi|297620819|ref|YP_003708956.1|	-	5.5e-08	31.9	22.9	5.5e-08	31.9	22.9	2.5	2	1	0	2	2	2	1	Transmembrane	amino	acid	transporter	protein
YfzA	PF14118.6	gi|297620819|ref|YP_003708956.1|	-	0.19	12.2	0.0	0.19	12.2	0.0	3.5	4	0	0	4	4	4	0	YfzA-like	protein
SufE	PF02657.15	gi|297620820|ref|YP_003708957.1|	-	1.3e-31	108.9	0.0	1.6e-31	108.7	0.0	1.0	1	0	0	1	1	1	1	Fe-S	metabolism	associated	domain
eIF-1a	PF01176.19	gi|297620821|ref|YP_003708958.1|	-	4.4e-25	87.3	0.0	4.9e-25	87.1	0.0	1.0	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
RsgA_N	PF16745.5	gi|297620821|ref|YP_003708958.1|	-	0.0077	16.0	0.0	0.0088	15.8	0.0	1.2	1	0	0	1	1	1	1	RsgA	N-terminal	domain
GTP_EFTU	PF00009.27	gi|297620822|ref|YP_003708959.1|	-	2.5e-57	193.6	0.1	3.3e-57	193.2	0.1	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.17	gi|297620822|ref|YP_003708959.1|	-	6.4e-32	110.2	0.4	1.4e-31	109.1	0.0	1.8	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.25	gi|297620822|ref|YP_003708959.1|	-	2.6e-18	66.2	1.4	2.6e-18	66.2	1.4	1.8	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|297620822|ref|YP_003708959.1|	-	4.2e-05	23.6	0.1	7.4e-05	22.8	0.1	1.4	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
RsgA_GTPase	PF03193.16	gi|297620822|ref|YP_003708959.1|	-	0.056	13.4	0.1	0.14	12.0	0.0	1.7	2	0	0	2	2	2	0	RsgA	GTPase
SecE	PF00584.20	gi|297620823|ref|YP_003708960.1|	-	3.4e-15	55.7	3.0	4.4e-15	55.3	3.0	1.1	1	0	0	1	1	1	1	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Sec61_beta	PF03911.16	gi|297620823|ref|YP_003708960.1|	-	0.057	13.4	0.4	0.09	12.8	0.4	1.3	1	0	0	1	1	1	0	Sec61beta	family
NusG	PF02357.19	gi|297620824|ref|YP_003708961.1|	-	6.9e-20	71.4	0.1	1.3e-19	70.5	0.1	1.5	1	0	0	1	1	1	1	Transcription	termination	factor	nusG
KOW	PF00467.29	gi|297620824|ref|YP_003708961.1|	-	2.7e-05	23.9	2.6	9.9e-05	22.2	2.6	2.0	1	0	0	1	1	1	1	KOW	motif
DUF2291	PF10054.9	gi|297620824|ref|YP_003708961.1|	-	0.015	15.1	0.1	0.025	14.3	0.1	1.3	1	0	0	1	1	1	0	Predicted	periplasmic	lipoprotein	(DUF2291)
SH3_15	PF18346.1	gi|297620824|ref|YP_003708961.1|	-	0.5	10.7	3.5	18	5.7	1.2	3.1	2	1	0	2	2	2	0	Mind	bomb	SH3	repeat	domain
Ribosomal_L11_N	PF03946.14	gi|297620825|ref|YP_003708962.1|	-	2e-31	107.6	0.9	4.1e-31	106.6	0.9	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.19	gi|297620825|ref|YP_003708962.1|	-	1e-23	83.6	0.2	1.7e-23	82.9	0.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
Ribosomal_L1	PF00687.21	gi|297620826|ref|YP_003708963.1|	-	2e-53	181.2	0.0	2.5e-53	180.9	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
PHP_C	PF13263.6	gi|297620826|ref|YP_003708963.1|	-	0.032	14.0	0.0	0.7	9.7	0.0	2.5	2	0	0	2	2	2	0	PHP-associated
HsbA	PF12296.8	gi|297620826|ref|YP_003708963.1|	-	0.041	14.3	0.8	1	9.8	0.8	2.5	1	1	0	1	1	1	0	Hydrophobic	surface	binding	protein	A
Ribosomal_L10	PF00466.20	gi|297620827|ref|YP_003708964.1|	-	1.6e-16	60.3	0.0	2.1e-16	59.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L10
Ribosomal_L12	PF00542.19	gi|297620828|ref|YP_003708965.1|	-	1.5e-25	89.3	10.6	1.5e-25	89.3	10.6	2.2	2	1	0	2	2	2	1	Ribosomal	protein	L7/L12	C-terminal	domain
Ribosomal_L12_N	PF16320.5	gi|297620828|ref|YP_003708965.1|	-	6.5e-17	61.0	11.7	6.5e-17	61.0	11.7	3.0	3	0	0	3	3	3	2	Ribosomal	protein	L7/L12	dimerisation	domain
RNA_pol_Rpb2_6	PF00562.28	gi|297620829|ref|YP_003708966.1|	-	2.8e-157	523.8	0.1	8.3e-157	522.2	0.4	1.6	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_3	PF04565.16	gi|297620829|ref|YP_003708966.1|	-	3.3e-30	104.0	0.0	6.2e-30	103.2	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_1	PF04563.15	gi|297620829|ref|YP_003708966.1|	-	1.2e-24	86.9	0.0	4.2e-24	85.2	0.0	1.9	1	1	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_7	PF04560.20	gi|297620829|ref|YP_003708966.1|	-	1.6e-24	86.1	0.0	4e-24	84.8	0.0	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_45	PF10385.9	gi|297620829|ref|YP_003708966.1|	-	5.9e-20	71.3	0.4	3.2e-19	69.0	0.4	2.4	2	0	0	2	2	2	1	RNA	polymerase	beta	subunit	external	1	domain
RNA_pol_Rpb2_2	PF04561.14	gi|297620829|ref|YP_003708966.1|	-	7.8e-20	71.3	0.7	1.3e-14	54.3	0.1	2.4	2	0	0	2	2	2	2	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_5	PF04567.17	gi|297620829|ref|YP_003708966.1|	-	0.082	13.5	0.4	0.27	11.8	0.4	2.0	1	0	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	5
RNA_pol_Rpb1_1	PF04997.12	gi|297620830|ref|YP_003708967.1|	-	4.2e-85	285.8	0.0	7.3e-85	285.0	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_5	PF04998.17	gi|297620830|ref|YP_003708967.1|	-	3.2e-77	259.6	0.5	5.8e-77	258.7	0.5	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_2	PF00623.20	gi|297620830|ref|YP_003708967.1|	-	9.2e-38	130.1	0.0	6.4e-27	94.8	0.0	2.6	1	1	1	2	2	2	2	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.18	gi|297620830|ref|YP_003708967.1|	-	4.4e-25	88.4	0.0	1.4e-24	86.8	0.0	2.0	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.17	gi|297620830|ref|YP_003708967.1|	-	4.3e-12	45.9	0.0	1.1e-11	44.6	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
Apocytochr_F_C	PF01333.19	gi|297620830|ref|YP_003708967.1|	-	0.00018	21.5	2.7	0.46	10.5	0.2	3.5	3	0	0	3	3	3	1	Apocytochrome	F,	C-terminal
Biotin_lipoyl_2	PF13533.6	gi|297620830|ref|YP_003708967.1|	-	0.00022	21.0	2.6	0.59	10.0	0.2	3.6	3	0	0	3	3	3	2	Biotin-lipoyl	like
Peptidase_M23	PF01551.22	gi|297620830|ref|YP_003708967.1|	-	0.0015	18.7	1.8	0.084	13.1	0.1	3.8	4	0	0	4	4	4	1	Peptidase	family	M23
RnfC_N	PF13375.6	gi|297620830|ref|YP_003708967.1|	-	0.0027	17.6	0.1	0.95	9.5	0.1	3.1	2	0	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
DUF1840	PF08895.11	gi|297620831|ref|YP_003708968.1|	-	0.37	11.1	5.2	0.47	10.8	0.3	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1840)
Glyco_hydro_67N	PF03648.14	gi|297620831|ref|YP_003708968.1|	-	0.4	11.0	2.3	0.96	9.8	0.6	2.6	2	1	0	2	2	2	0	Glycosyl	hydrolase	family	67	N-terminus
TLC	PF03219.14	gi|297620832|ref|YP_003708969.1|	-	1e-117	393.9	25.1	1.3e-117	393.5	25.1	1.1	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
DUF5455	PF17537.2	gi|297620832|ref|YP_003708969.1|	-	0.046	14.1	1.0	0.046	14.1	1.0	3.2	5	0	0	5	5	5	0	Family	of	unknown	function	(DUF5455)
TAL_FSA	PF00923.19	gi|297620833|ref|YP_003708970.1|	-	1.1e-100	336.7	0.0	1.3e-100	336.5	0.0	1.0	1	0	0	1	1	1	1	Transaldolase/Fructose-6-phosphate	aldolase
zinc_ribbon_4	PF13717.6	gi|297620834|ref|YP_003708971.1|	-	0.046	13.7	0.2	0.046	13.7	0.2	1.6	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF3417	PF11897.8	gi|297620835|ref|YP_003708972.1|	-	0.011	16.2	0.4	0.011	16.2	0.4	3.4	3	1	0	4	4	4	0	Protein	of	unknown	function	(DUF3417)
DASH_Ask1	PF08655.10	gi|297620835|ref|YP_003708972.1|	-	0.035	14.0	0.0	0.12	12.3	0.0	1.9	1	0	0	1	1	1	0	DASH	complex	subunit	Ask1
Eno-Rase_FAD_bd	PF07055.12	gi|297620835|ref|YP_003708972.1|	-	0.075	13.5	1.5	29	5.2	0.1	4.0	4	0	0	4	4	4	0	Enoyl	reductase	FAD	binding	domain
DUF5344	PF17279.2	gi|297620835|ref|YP_003708972.1|	-	0.55	10.9	5.2	54	4.5	0.0	5.0	5	1	1	6	6	6	0	Family	of	unknown	function	(DUF5344)
Sec2p	PF06428.11	gi|297620835|ref|YP_003708972.1|	-	4	7.5	5.4	1.7	8.6	0.2	3.2	4	0	0	4	4	4	0	GDP/GTP	exchange	factor	Sec2p
Amidohydro_1	PF01979.20	gi|297620836|ref|YP_003708973.1|	-	0.0096	15.3	0.1	0.01	15.2	0.1	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
MHCassoc_trimer	PF08831.10	gi|297620839|ref|YP_003708976.1|	-	0.1	12.7	0.1	0.43	10.6	0.0	1.9	2	0	0	2	2	2	0	Class	II	MHC-associated	invariant	chain	trimerisation	domain
HrpE	PF06188.12	gi|297620840|ref|YP_003708977.1|	-	5.1e-06	26.5	3.5	7.1e-06	26.0	3.5	1.2	1	0	0	1	1	1	1	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
V-ATPase_G	PF03179.15	gi|297620840|ref|YP_003708977.1|	-	7.5e-05	23.2	10.4	0.0001	22.8	9.8	1.5	1	1	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
ATP-synt_B	PF00430.18	gi|297620840|ref|YP_003708977.1|	-	0.00022	21.3	14.2	0.00044	20.4	14.2	1.5	1	0	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
DivIVA	PF05103.13	gi|297620840|ref|YP_003708977.1|	-	0.0013	18.8	8.5	0.0028	17.7	8.5	1.7	1	1	0	1	1	1	1	DivIVA	protein
DUF883	PF05957.13	gi|297620840|ref|YP_003708977.1|	-	0.0053	17.3	6.0	0.024	15.2	5.7	2.1	1	1	1	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF883)
GerD	PF17898.1	gi|297620840|ref|YP_003708977.1|	-	0.014	15.4	1.2	0.035	14.0	0.1	2.2	2	1	0	2	2	2	0	Spore	germination	GerD	central	core	domain
7TMR-HDED	PF07697.11	gi|297620840|ref|YP_003708977.1|	-	0.023	14.8	3.7	0.029	14.5	3.7	1.2	1	0	0	1	1	1	0	7TM-HD	extracellular
DUF2362	PF10154.9	gi|297620840|ref|YP_003708977.1|	-	0.033	13.2	3.3	0.042	12.8	3.3	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2362)
KfrA_N	PF11740.8	gi|297620840|ref|YP_003708977.1|	-	0.05	14.3	11.1	0.34	11.6	9.3	2.4	2	1	0	2	2	2	0	Plasmid	replication	region	DNA-binding	N-term
V-ATPase_G_2	PF16999.5	gi|297620840|ref|YP_003708977.1|	-	0.073	13.5	12.8	0.18	12.2	12.8	1.8	1	1	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
DnaGprimase_HBD	PF16730.5	gi|297620840|ref|YP_003708977.1|	-	0.15	12.2	0.2	0.15	12.2	0.2	2.6	2	1	1	3	3	3	0	DnaG-primase	C-terminal,	helicase-binding	domain
DUF842	PF05811.13	gi|297620840|ref|YP_003708977.1|	-	0.24	11.1	2.5	0.38	10.5	2.5	1.4	1	1	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF842)
DUF5591	PF17884.1	gi|297620840|ref|YP_003708977.1|	-	0.32	10.8	2.2	0.36	10.7	0.8	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5591)
FANCI_S1-cap	PF14674.6	gi|297620840|ref|YP_003708977.1|	-	0.33	11.1	0.1	0.33	11.1	0.1	2.5	3	1	0	3	3	3	0	FANCI	solenoid	1	cap
Phasin	PF05597.11	gi|297620840|ref|YP_003708977.1|	-	0.78	9.8	7.7	1.3	9.0	7.3	1.6	1	1	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
PIN_8	PF18476.1	gi|297620840|ref|YP_003708977.1|	-	0.97	9.2	7.0	1.4	8.7	7.0	1.4	1	0	0	1	1	1	0	PIN	like	domain
DUF3349	PF11829.8	gi|297620840|ref|YP_003708977.1|	-	3	8.7	5.3	1.9	9.3	0.5	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3349)
DUF2120	PF09893.9	gi|297620840|ref|YP_003708977.1|	-	5.6	7.1	8.8	14	5.8	6.4	2.5	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
DUF2764	PF10962.8	gi|297620841|ref|YP_003708978.1|	-	3.6e-55	187.4	5.8	4.3e-55	187.1	5.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2764)
ATP-synt_ab	PF00006.25	gi|297620842|ref|YP_003708979.1|	-	1.1e-75	254.0	0.0	1.5e-75	253.5	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_Xtn	PF16886.5	gi|297620842|ref|YP_003708979.1|	-	6.6e-34	116.4	0.1	2.8e-33	114.3	0.1	2.0	2	0	0	2	2	2	1	ATPsynthase	alpha/beta	subunit	N-term	extension
ATP-synt_ab_N	PF02874.23	gi|297620842|ref|YP_003708979.1|	-	2.2e-09	37.7	0.9	8.6e-09	35.8	0.9	2.1	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
Glyco_hydro_16	PF00722.21	gi|297620842|ref|YP_003708979.1|	-	0.093	12.2	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolases	family	16
eIF2_C	PF09173.11	gi|297620842|ref|YP_003708979.1|	-	0.13	12.6	0.1	0.34	11.2	0.1	1.8	1	0	0	1	1	1	0	Initiation	factor	eIF2	gamma,	C	terminal
ATP-synt_ab	PF00006.25	gi|297620843|ref|YP_003708980.1|	-	1.1e-44	152.6	0.1	1.6e-44	152.1	0.1	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.23	gi|297620843|ref|YP_003708980.1|	-	6.6e-08	33.0	0.4	1.9e-07	31.5	0.4	1.8	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
DUF150_C	PF17384.2	gi|297620843|ref|YP_003708980.1|	-	0.15	12.2	0.1	0.61	10.3	0.1	2.1	2	0	0	2	2	2	0	RimP	C-terminal	SH3	domain
ATP-synt_D	PF01813.17	gi|297620844|ref|YP_003708981.1|	-	1.3e-36	126.3	6.6	1.5e-36	126.1	6.6	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
Cmyb_C	PF09316.10	gi|297620844|ref|YP_003708981.1|	-	0.072	12.8	0.9	0.13	11.9	0.9	1.4	1	0	0	1	1	1	0	C-myb,	C-terminal
Spc7	PF08317.11	gi|297620844|ref|YP_003708981.1|	-	3.4	6.5	12.1	0.12	11.2	4.1	2.0	2	0	0	2	2	2	0	Spc7	kinetochore	protein
V_ATPase_I	PF01496.19	gi|297620845|ref|YP_003708982.1|	-	4.1e-15	54.8	2.3	3.6e-11	41.8	0.0	3.0	2	1	0	3	3	3	2	V-type	ATPase	116kDa	subunit	family
DUF4200	PF13863.6	gi|297620845|ref|YP_003708982.1|	-	0.0012	19.2	7.4	0.0063	16.9	2.8	2.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4200)
DUF4349	PF14257.6	gi|297620845|ref|YP_003708982.1|	-	0.086	12.3	1.3	12	5.3	0.2	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4349)
Lysozyme_like	PF13702.6	gi|297620845|ref|YP_003708982.1|	-	0.14	11.8	0.0	0.28	10.9	0.0	1.4	1	0	0	1	1	1	0	Lysozyme-like
DivIC	PF04977.15	gi|297620845|ref|YP_003708982.1|	-	0.16	11.8	3.5	9.8	6.0	0.6	3.3	3	0	0	3	3	3	0	Septum	formation	initiator
DUF4140	PF13600.6	gi|297620845|ref|YP_003708982.1|	-	0.63	10.5	1.9	36	4.9	0.2	2.4	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF1690	PF07956.11	gi|297620845|ref|YP_003708982.1|	-	0.86	10.0	4.2	2.4	8.6	0.2	2.3	2	0	0	2	2	2	0	Protein	of	Unknown	function	(DUF1690)
ABC_tran_CTD	PF16326.5	gi|297620845|ref|YP_003708982.1|	-	0.94	9.8	8.6	0.48	10.7	0.6	3.0	3	1	0	3	3	3	0	ABC	transporter	C-terminal	domain
Fib_alpha	PF08702.10	gi|297620845|ref|YP_003708982.1|	-	1.3	9.2	5.4	0.65	10.2	0.5	2.3	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Tropomyosin_1	PF12718.7	gi|297620845|ref|YP_003708982.1|	-	1.6	8.9	9.8	0.12	12.6	1.0	2.4	2	0	0	2	2	2	0	Tropomyosin	like
FapA	PF03961.13	gi|297620845|ref|YP_003708982.1|	-	3.6	6.1	9.9	1.3	7.5	2.3	2.6	1	1	2	3	3	3	0	Flagellar	Assembly	Protein	A
Snapin_Pallidin	PF14712.6	gi|297620845|ref|YP_003708982.1|	-	5.7	7.4	8.9	16	6.0	0.6	3.1	2	1	1	3	3	3	0	Snapin/Pallidin
GP57	PF17594.2	gi|297620845|ref|YP_003708982.1|	-	5.9	6.7	5.1	3	7.6	0.1	3.0	4	0	0	4	4	4	0	Phage	Tail	fiber	assembly	helper	gene	product	57
ATP-synt_C	PF00137.21	gi|297620846|ref|YP_003708983.1|	-	6.1e-21	74.5	30.6	1.2e-11	44.7	13.4	2.1	2	0	0	2	2	2	2	ATP	synthase	subunit	C
Lyase_1	PF00206.20	gi|297620847|ref|YP_003708984.1|	-	1.8e-110	369.2	0.0	3.5e-110	368.3	0.0	1.4	2	0	0	2	2	2	1	Lyase
FumaraseC_C	PF10415.9	gi|297620847|ref|YP_003708984.1|	-	7.8e-20	71.1	0.2	7.8e-20	71.1	0.2	2.0	2	0	0	2	2	2	1	Fumarase	C	C-terminus
Lipase_3	PF01764.25	gi|297620849|ref|YP_003708986.1|	-	0.0075	16.1	0.0	0.029	14.2	0.0	2.0	1	0	0	1	1	1	1	Lipase	(class	3)
AAA	PF00004.29	gi|297620850|ref|YP_003708987.1|	-	1.4e-34	119.4	0.0	4.6e-34	117.7	0.0	2.0	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.14	gi|297620850|ref|YP_003708987.1|	-	1.9e-05	24.9	0.0	8.6e-05	22.7	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
PEX-1N	PF09262.11	gi|297620850|ref|YP_003708987.1|	-	8.9e-05	22.8	3.6	0.21	12.0	0.1	4.5	4	0	0	4	4	4	1	Peroxisome	biogenesis	factor	1,	N-terminal
AAA_18	PF13238.6	gi|297620850|ref|YP_003708987.1|	-	0.00017	22.2	0.0	0.00094	19.7	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
AAA_lid_3	PF17862.1	gi|297620850|ref|YP_003708987.1|	-	0.0002	21.1	0.0	0.00094	18.9	0.0	2.2	2	0	0	2	2	2	1	AAA+	lid	domain
RuvB_N	PF05496.12	gi|297620850|ref|YP_003708987.1|	-	0.0002	21.1	0.1	0.0013	18.5	0.0	2.4	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_24	PF13479.6	gi|297620850|ref|YP_003708987.1|	-	0.00033	20.4	0.0	0.00091	19.0	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.14	gi|297620850|ref|YP_003708987.1|	-	0.00052	20.0	0.0	0.0014	18.7	0.0	1.8	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|297620850|ref|YP_003708987.1|	-	0.0013	19.2	0.1	0.005	17.2	0.1	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|297620850|ref|YP_003708987.1|	-	0.0016	18.7	0.1	0.046	14.0	0.1	2.5	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|297620850|ref|YP_003708987.1|	-	0.0019	18.4	0.0	0.0051	17.0	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
eIF-1a	PF01176.19	gi|297620850|ref|YP_003708987.1|	-	0.0077	16.0	0.1	1.3	8.8	0.0	2.7	2	0	0	2	2	2	1	Translation	initiation	factor	1A	/	IF-1
AAA_25	PF13481.6	gi|297620850|ref|YP_003708987.1|	-	0.01	15.5	0.0	0.019	14.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|297620850|ref|YP_003708987.1|	-	0.02	14.7	0.0	0.092	12.5	0.0	2.2	3	0	0	3	3	2	0	IstB-like	ATP	binding	protein
RNA_helicase	PF00910.22	gi|297620850|ref|YP_003708987.1|	-	0.029	14.8	0.0	0.081	13.3	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
EndoU_bacteria	PF14436.6	gi|297620850|ref|YP_003708987.1|	-	0.03	14.7	0.0	0.083	13.2	0.0	1.7	1	0	0	1	1	1	0	Bacterial	EndoU	nuclease
Mg_chelatase	PF01078.21	gi|297620850|ref|YP_003708987.1|	-	0.031	13.7	0.0	0.06	12.7	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Rpn3_C	PF08375.11	gi|297620850|ref|YP_003708987.1|	-	0.05	14.0	0.0	0.15	12.5	0.0	1.8	1	0	0	1	1	1	0	Proteasome	regulatory	subunit	C-terminal
AAA_28	PF13521.6	gi|297620850|ref|YP_003708987.1|	-	0.053	13.8	0.0	0.16	12.2	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
DUF2634	PF10934.8	gi|297620850|ref|YP_003708987.1|	-	0.069	13.3	0.0	0.28	11.3	0.0	2.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2634)
AAA_3	PF07726.11	gi|297620850|ref|YP_003708987.1|	-	0.082	12.8	0.0	0.29	11.0	0.0	2.0	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Tox-PL-2	PF15643.6	gi|297620850|ref|YP_003708987.1|	-	0.11	12.7	0.1	0.36	11.0	0.1	1.9	1	0	0	1	1	1	0	Papain	fold	toxin	2
AAA_30	PF13604.6	gi|297620850|ref|YP_003708987.1|	-	0.12	12.0	0.0	0.24	11.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
F-box-like	PF12937.7	gi|297620851|ref|YP_003708988.1|	-	0.00098	19.0	0.0	0.0023	17.8	0.0	1.6	1	0	0	1	1	1	1	F-box-like
F-box	PF00646.33	gi|297620851|ref|YP_003708988.1|	-	0.0025	17.6	0.1	0.0078	16.1	0.1	1.9	1	0	0	1	1	1	1	F-box	domain
RNase_T	PF00929.24	gi|297620852|ref|YP_003708989.1|	-	3.3e-34	118.8	0.4	4.4e-34	118.4	0.4	1.2	1	0	0	1	1	1	1	Exonuclease
RNase_H_2	PF13482.6	gi|297620852|ref|YP_003708989.1|	-	4.5e-08	33.3	0.4	1.8e-07	31.3	0.4	1.9	1	1	0	1	1	1	1	RNase_H	superfamily
QSregVF_b	PF12843.7	gi|297620852|ref|YP_003708989.1|	-	5.1e-08	32.7	0.0	1.8e-07	30.9	0.1	1.8	2	0	0	2	2	2	1	Putative	quorum-sensing-regulated	virulence	factor
DUF5051	PF16473.5	gi|297620852|ref|YP_003708989.1|	-	1.7e-07	31.3	1.5	2.5e-06	27.6	1.5	2.1	1	1	0	1	1	1	1	3'	exoribonuclease,	RNase	T-like
YbjN	PF10722.9	gi|297620853|ref|YP_003708990.1|	-	1.8e-08	34.5	0.0	2e-08	34.3	0.0	1.1	1	0	0	1	1	1	1	Putative	bacterial	sensory	transduction	regulator
Ish1	PF10281.9	gi|297620853|ref|YP_003708990.1|	-	0.19	12.0	0.3	33	4.9	0.0	2.8	3	0	0	3	3	3	0	Putative	stress-responsive	nuclear	envelope	protein
CsrA	PF02599.16	gi|297620854|ref|YP_003708991.1|	-	2.3e-19	69.1	2.0	3e-19	68.7	2.0	1.2	1	0	0	1	1	1	1	Global	regulator	protein	family
FtsK_SpoIIIE_N	PF12538.8	gi|297620854|ref|YP_003708991.1|	-	0.0027	17.9	0.9	0.0027	17.9	0.9	1.0	1	0	0	1	1	1	1	DNA	transporter
GLYCAM-1	PF05242.11	gi|297620854|ref|YP_003708991.1|	-	0.028	14.5	0.8	0.048	13.8	0.5	1.4	1	1	1	2	2	2	0	Glycosylation-dependent	cell	adhesion	molecule	1	(GlyCAM-1)
FliO	PF04347.13	gi|297620856|ref|YP_003708993.1|	-	2e-06	28.0	0.3	8.9e-06	25.9	0.0	1.9	2	0	0	2	2	2	1	Flagellar	biosynthesis	protein,	FliO
MurJ	PF03023.14	gi|297620856|ref|YP_003708993.1|	-	0.0013	17.4	0.1	0.0017	17.0	0.1	1.1	1	0	0	1	1	1	1	Lipid	II	flippase	MurJ
COX4_pro_2	PF07835.12	gi|297620856|ref|YP_003708993.1|	-	8.5	6.6	10.4	0.1	12.7	2.6	1.8	2	0	0	2	2	2	0	Bacterial	aa3	type	cytochrome	c	oxidase	subunit	IV
RHS_repeat	PF05593.14	gi|297620857|ref|YP_003708994.1|	-	3.6e-54	180.6	51.1	1.6e-05	25.3	0.1	20.8	17	3	7	24	24	24	14	RHS	Repeat
Ribonuclease	PF00545.20	gi|297620857|ref|YP_003708994.1|	-	1.9e-14	54.2	1.2	1.9e-14	54.2	1.2	2.8	2	0	0	2	2	2	1	ribonuclease
MORN_2	PF07661.13	gi|297620857|ref|YP_003708994.1|	-	0.051	13.8	12.0	3.7	8.1	0.0	9.4	11	0	0	11	11	11	0	MORN	repeat	variant
TcfC	PF16967.5	gi|297620857|ref|YP_003708994.1|	-	0.094	12.2	0.0	0.37	10.3	0.0	2.0	2	0	0	2	2	2	0	E-set	like	domain
Barstar	PF01337.18	gi|297620858|ref|YP_003708995.1|	-	5.9e-23	80.7	0.3	9e-23	80.1	0.3	1.2	1	0	0	1	1	1	1	Barstar	(barnase	inhibitor)
DUF4096	PF13340.6	gi|297620860|ref|YP_003708997.1|	-	5.1e-30	103.5	0.9	6.9e-30	103.1	0.9	1.2	1	0	0	1	1	1	1	Putative	transposase	of	IS4/5	family	(DUF4096)
HTH_Tnp_1	PF01527.20	gi|297620861|ref|YP_003708998.1|	-	9.5e-12	45.1	0.5	1.2e-11	44.7	0.5	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.6	gi|297620861|ref|YP_003708998.1|	-	8.9e-05	22.5	0.0	0.00014	21.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|297620861|ref|YP_003708998.1|	-	0.00023	20.9	0.0	0.00038	20.2	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
rve	PF00665.26	gi|297620862|ref|YP_003708999.1|	-	4.4e-21	75.3	0.0	6.4e-21	74.7	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297620862|ref|YP_003708999.1|	-	3.9e-15	55.7	0.8	8.4e-15	54.7	0.8	1.6	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.6	gi|297620862|ref|YP_003708999.1|	-	1.9e-12	46.8	0.2	3.7e-12	45.8	0.2	1.5	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297620862|ref|YP_003708999.1|	-	0.0011	19.5	0.4	0.0011	19.5	0.4	2.4	3	0	0	3	3	3	1	Homeodomain-like	domain
rve_2	PF13333.6	gi|297620862|ref|YP_003708999.1|	-	0.01	16.0	1.0	0.021	15.0	1.0	1.5	1	0	0	1	1	1	0	Integrase	core	domain
PsiA	PF06952.11	gi|297620862|ref|YP_003708999.1|	-	0.029	13.6	3.5	0.75	9.0	0.0	2.3	2	1	0	2	2	2	0	PsiA	protein
rve_3	PF13683.6	gi|297620863|ref|YP_003709000.1|	-	1e-28	98.9	0.0	2.7e-28	97.5	0.0	1.8	1	0	0	1	1	1	1	Integrase	core	domain
rve	PF00665.26	gi|297620863|ref|YP_003709000.1|	-	1.6e-24	86.3	0.0	3.9e-24	85.1	0.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297620863|ref|YP_003709000.1|	-	2.4e-12	46.8	7.3	3.4e-12	46.3	6.5	1.7	1	1	0	1	1	1	1	HTH-like	domain
DDE_Tnp_IS240	PF13610.6	gi|297620863|ref|YP_003709000.1|	-	0.00022	21.5	0.0	0.00043	20.5	0.0	1.5	1	0	0	1	1	1	1	DDE	domain
rve_2	PF13333.6	gi|297620863|ref|YP_003709000.1|	-	0.002	18.3	0.0	0.0057	16.8	0.0	1.8	2	0	0	2	2	2	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297620863|ref|YP_003709000.1|	-	0.016	15.8	2.1	0.042	14.5	0.1	2.6	1	1	1	2	2	2	0	Homeodomain-like	domain
HTH_Tnp_1	PF01527.20	gi|297620864|ref|YP_003709001.1|	-	2.3e-19	69.5	0.2	2.8e-19	69.2	0.2	1.1	1	0	0	1	1	1	1	Transposase
HTH_23	PF13384.6	gi|297620864|ref|YP_003709001.1|	-	3e-06	26.8	0.0	6.2e-06	25.8	0.0	1.6	1	1	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297620864|ref|YP_003709001.1|	-	4.3e-05	23.6	0.0	7.2e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_IS630	PF01710.16	gi|297620864|ref|YP_003709001.1|	-	0.00017	21.6	0.3	0.0002	21.4	0.3	1.1	1	0	0	1	1	1	1	Transposase
HTH_Tnp_1_2	PF13022.6	gi|297620864|ref|YP_003709001.1|	-	0.0004	20.5	0.3	0.00065	19.9	0.3	1.4	1	1	0	1	1	1	1	Helix-turn-helix	of	insertion	element	transposase
HTH_29	PF13551.6	gi|297620864|ref|YP_003709001.1|	-	0.00082	19.3	0.1	0.0016	18.4	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
DUF1153	PF06627.11	gi|297620864|ref|YP_003709001.1|	-	0.0019	18.3	0.1	0.0031	17.6	0.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1153)
HTH_17	PF12728.7	gi|297620864|ref|YP_003709001.1|	-	0.0043	17.2	0.1	0.0084	16.3	0.0	1.7	2	1	0	2	2	2	1	Helix-turn-helix	domain
CreD	PF06123.12	gi|297620864|ref|YP_003709001.1|	-	0.024	13.5	0.1	0.024	13.4	0.1	1.0	1	0	0	1	1	1	0	Inner	membrane	protein	CreD
NusG_add	PF18298.1	gi|297620864|ref|YP_003709001.1|	-	0.057	13.6	0.0	0.075	13.3	0.0	1.3	1	1	0	1	1	1	0	NusG	additional	domain
HTH_psq	PF05225.16	gi|297620864|ref|YP_003709001.1|	-	0.11	12.3	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
Ntox37	PF15535.6	gi|297620865|ref|YP_003709002.1|	-	3.4e-22	78.6	1.5	3.4e-22	78.6	1.5	2.3	2	0	0	2	2	2	1	Bacterial	toxin	37
RHS_repeat	PF05593.14	gi|297620867|ref|YP_003709004.1|	-	0.00016	22.1	2.5	0.055	14.0	0.0	4.4	5	1	0	5	5	5	1	RHS	Repeat
DDE_Tnp_IS1	PF03400.13	gi|297620868|ref|YP_003709005.1|	-	2.2e-07	31.2	0.1	2.3e-07	31.2	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.6	gi|297620868|ref|YP_003709005.1|	-	0.0018	18.0	0.1	0.0024	17.6	0.1	1.3	1	0	0	1	1	1	1	Integrase	core	domain
zf-SAP30	PF13866.6	gi|297620868|ref|YP_003709005.1|	-	0.035	14.2	1.5	0.15	12.2	1.5	1.9	1	1	0	1	1	1	0	SAP30	zinc-finger
DDE_Tnp_IS1	PF03400.13	gi|297620869|ref|YP_003709006.1|	-	1e-11	45.3	0.1	2e-11	44.3	0.1	1.5	1	1	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.13	gi|297620869|ref|YP_003709006.1|	-	0.00071	19.3	2.7	0.0011	18.7	2.7	1.3	1	0	0	1	1	1	1	InsA	N-terminal	domain
DDE_Tnp_IS240	PF13610.6	gi|297620869|ref|YP_003709006.1|	-	0.00096	19.4	0.0	0.0016	18.7	0.0	1.5	1	0	0	1	1	1	1	DDE	domain
Zn-ribbon_8	PF09723.10	gi|297620869|ref|YP_003709006.1|	-	0.19	11.9	1.9	5.4	7.2	0.3	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|297620869|ref|YP_003709006.1|	-	0.43	11.3	5.4	0.7	10.6	0.7	2.8	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Transposase_mut	PF00872.18	gi|297620871|ref|YP_003709008.1|	-	1.3e-71	241.5	0.0	1.6e-71	241.2	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297620871|ref|YP_003709008.1|	-	1.4e-05	25.4	0.0	5e-05	23.6	0.0	2.0	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.6	gi|297620871|ref|YP_003709008.1|	-	0.023	14.9	0.4	0.27	11.5	0.0	2.8	2	1	0	2	2	2	0	DDE	domain
Hydrolase_3	PF08282.12	gi|297620873|ref|YP_003709010.1|	-	1.3e-36	126.7	0.0	1.4e-36	126.5	0.0	1.0	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.13	gi|297620873|ref|YP_003709010.1|	-	7e-05	22.5	0.0	0.019	14.5	0.0	2.2	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.26	gi|297620873|ref|YP_003709010.1|	-	0.00029	21.2	0.0	0.046	14.0	0.0	2.3	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|297620873|ref|YP_003709010.1|	-	0.16	12.4	0.6	5.2	7.4	0.0	2.7	2	1	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
FolB	PF02152.18	gi|297620874|ref|YP_003709011.1|	-	3e-22	79.2	0.0	3.4e-22	79.1	0.0	1.0	1	0	0	1	1	1	1	Dihydroneopterin	aldolase
DUF3638	PF12340.8	gi|297620875|ref|YP_003709012.1|	-	1.4e-09	37.6	4.5	1.7e-07	30.8	1.2	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3638)
ResIII	PF04851.15	gi|297620875|ref|YP_003709012.1|	-	5.5e-06	26.5	1.4	3e-05	24.1	1.4	2.4	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
adh_short_C2	PF13561.6	gi|297620876|ref|YP_003709013.1|	-	6.8e-41	140.4	0.0	1.3e-40	139.5	0.0	1.4	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|297620876|ref|YP_003709013.1|	-	2.3e-38	131.7	0.0	2.8e-38	131.3	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|297620876|ref|YP_003709013.1|	-	3.6e-09	36.8	0.0	6.7e-09	35.9	0.0	1.5	2	0	0	2	2	2	1	KR	domain
Epimerase	PF01370.21	gi|297620876|ref|YP_003709013.1|	-	1.6e-05	24.5	0.1	1.9e-05	24.3	0.1	1.3	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|297620876|ref|YP_003709013.1|	-	0.0015	18.0	0.1	0.0025	17.3	0.1	1.3	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
DFP	PF04127.15	gi|297620876|ref|YP_003709013.1|	-	0.0024	17.7	0.5	0.23	11.3	0.1	2.8	2	1	1	3	3	3	1	DNA	/	pantothenate	metabolism	flavoprotein
PALP	PF00291.25	gi|297620876|ref|YP_003709013.1|	-	0.0083	15.6	0.0	0.01	15.3	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
adh_short_C2	PF13561.6	gi|297620879|ref|YP_003709016.1|	-	9.9e-51	172.5	0.8	5.4e-47	160.3	0.1	2.1	2	0	0	2	2	2	2	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|297620879|ref|YP_003709016.1|	-	4e-09	36.2	0.0	9.2e-06	25.2	0.0	2.2	2	0	0	2	2	2	2	short	chain	dehydrogenase
Enoyl_reductase	PF12241.8	gi|297620879|ref|YP_003709016.1|	-	0.0072	15.7	0.0	0.21	10.9	0.0	2.1	1	1	0	2	2	2	1	Trans-2-enoyl-CoA	reductase	catalytic	region
Gly_rich_SFCGS	PF14272.6	gi|297620879|ref|YP_003709016.1|	-	0.06	13.4	1.2	1.2	9.1	0.3	2.5	2	0	0	2	2	2	0	Glycine-rich	SFCGS
DUF3109	PF11307.8	gi|297620880|ref|YP_003709017.1|	-	0.027	14.3	0.0	0.091	12.6	0.0	1.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3109)
ADH_zinc_N_2	PF13602.6	gi|297620881|ref|YP_003709018.1|	-	4.5e-26	92.5	0.0	8.6e-26	91.6	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N	PF00107.26	gi|297620881|ref|YP_003709018.1|	-	5.4e-23	81.4	0.1	9.4e-23	80.6	0.1	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.12	gi|297620881|ref|YP_003709018.1|	-	4.2e-12	45.9	0.1	4.8e-10	39.3	0.0	2.7	2	1	1	3	3	3	2	Alcohol	dehydrogenase	GroES-like	domain
NAD_binding_3	PF03447.16	gi|297620881|ref|YP_003709018.1|	-	0.12	13.0	0.0	0.23	12.1	0.0	1.4	1	0	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
Ribonuc_L-PSP	PF01042.21	gi|297620882|ref|YP_003709019.1|	-	5e-36	123.4	0.0	5.6e-36	123.2	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
Metallophos	PF00149.28	gi|297620883|ref|YP_003709020.1|	-	2.3e-10	41.3	0.0	3.1e-10	40.9	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
PRK	PF00485.18	gi|297620884|ref|YP_003709021.1|	-	9e-41	139.8	0.0	1.1e-40	139.4	0.0	1.1	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_18	PF13238.6	gi|297620884|ref|YP_003709021.1|	-	7.5e-08	33.0	0.0	1e-07	32.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
CoaE	PF01121.20	gi|297620884|ref|YP_003709021.1|	-	0.00033	20.4	0.5	0.063	12.9	0.1	2.1	2	0	0	2	2	2	2	Dephospho-CoA	kinase
dNK	PF01712.19	gi|297620884|ref|YP_003709021.1|	-	0.00045	20.1	0.2	0.027	14.3	0.2	2.1	1	1	0	1	1	1	1	Deoxynucleoside	kinase
AAA_33	PF13671.6	gi|297620884|ref|YP_003709021.1|	-	0.00053	20.2	0.0	0.00087	19.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|297620884|ref|YP_003709021.1|	-	0.0013	18.1	0.0	0.0023	17.3	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
T2SSE	PF00437.20	gi|297620884|ref|YP_003709021.1|	-	0.0056	15.8	0.5	0.027	13.6	0.2	1.9	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.6	gi|297620884|ref|YP_003709021.1|	-	0.0061	17.0	0.5	2.6	8.5	0.1	2.3	2	0	0	2	2	2	2	AAA	domain
CbiA	PF01656.23	gi|297620884|ref|YP_003709021.1|	-	0.017	15.2	0.0	0.027	14.5	0.0	1.3	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
SRP54	PF00448.22	gi|297620884|ref|YP_003709021.1|	-	0.018	14.7	0.4	0.049	13.3	0.3	1.7	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
Cytidylate_kin	PF02224.18	gi|297620884|ref|YP_003709021.1|	-	0.023	14.5	0.5	3.8	7.2	0.1	2.3	1	1	1	2	2	2	0	Cytidylate	kinase
AAA_28	PF13521.6	gi|297620884|ref|YP_003709021.1|	-	0.026	14.8	0.0	0.039	14.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|297620884|ref|YP_003709021.1|	-	0.06	13.9	0.0	0.082	13.4	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
MobB	PF03205.14	gi|297620884|ref|YP_003709021.1|	-	0.074	12.9	1.8	0.85	9.5	0.3	2.6	3	0	0	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NB-ARC	PF00931.22	gi|297620884|ref|YP_003709021.1|	-	0.086	12.0	0.2	0.16	11.1	0.2	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_24	PF13479.6	gi|297620884|ref|YP_003709021.1|	-	0.14	11.9	1.0	0.22	11.2	0.9	1.7	1	1	1	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|297620884|ref|YP_003709021.1|	-	0.14	12.0	0.1	0.22	11.4	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_23	PF13476.6	gi|297620884|ref|YP_003709021.1|	-	0.55	10.7	2.0	0.98	9.9	1.8	1.4	1	1	0	1	1	1	0	AAA	domain
Yip1	PF04893.17	gi|297620885|ref|YP_003709022.1|	-	0.14	11.8	10.4	0.18	11.5	10.4	1.1	1	0	0	1	1	1	0	Yip1	domain
DUF2953	PF11167.8	gi|297620885|ref|YP_003709022.1|	-	0.17	12.0	2.8	0.76	9.9	0.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2953)
SIMPL	PF04402.14	gi|297620886|ref|YP_003709023.1|	-	4.2e-42	144.9	2.3	4.9e-42	144.7	2.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF541)
DeoC	PF01791.9	gi|297620887|ref|YP_003709024.1|	-	4.2e-63	213.1	0.0	5.1e-63	212.8	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
Epimerase	PF01370.21	gi|297620889|ref|YP_003709026.1|	-	6.8e-09	35.5	0.0	9.9e-09	35.0	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
F420_oxidored	PF03807.17	gi|297620889|ref|YP_003709026.1|	-	0.00035	21.1	0.0	0.0007	20.1	0.0	1.5	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
UDPG_MGDP_dh_N	PF03721.14	gi|297620889|ref|YP_003709026.1|	-	0.0015	18.2	0.0	0.018	14.6	0.0	2.0	1	1	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|297620889|ref|YP_003709026.1|	-	0.0095	16.2	0.0	0.015	15.5	0.0	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
AlaDh_PNT_C	PF01262.21	gi|297620889|ref|YP_003709026.1|	-	0.019	14.3	0.0	0.03	13.6	0.0	1.2	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.18	gi|297620889|ref|YP_003709026.1|	-	0.061	13.6	0.0	0.1	12.9	0.0	1.4	1	0	0	1	1	1	0	TrkA-N	domain
Adenine_glyco	PF03352.13	gi|297620890|ref|YP_003709027.1|	-	5.6e-81	270.5	0.1	6.9e-81	270.2	0.1	1.0	1	0	0	1	1	1	1	Methyladenine	glycosylase
DUF3932	PF13068.6	gi|297620890|ref|YP_003709027.1|	-	0.12	12.7	0.0	0.23	11.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3932)
SH3_7	PF12914.7	gi|297620890|ref|YP_003709027.1|	-	0.12	12.5	0.0	0.24	11.6	0.0	1.5	1	0	0	1	1	1	0	SH3	domain	of	SH3b2	type
GSH-S_ATP	PF02955.16	gi|297620890|ref|YP_003709027.1|	-	0.13	11.6	0.0	0.24	10.8	0.0	1.4	1	0	0	1	1	1	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
DNA_binding_1	PF01035.20	gi|297620891|ref|YP_003709028.1|	-	6.3e-32	109.5	0.1	1e-31	108.9	0.1	1.3	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
Methyltransf_1N	PF02870.15	gi|297620891|ref|YP_003709028.1|	-	0.00079	20.2	0.0	0.0012	19.6	0.0	1.3	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	ribonuclease-like	domain
Efg1	PF10153.9	gi|297620891|ref|YP_003709028.1|	-	0.026	14.9	0.4	0.046	14.1	0.4	1.3	1	0	0	1	1	1	0	rRNA-processing	protein	Efg1
PrgU	PF09627.10	gi|297620891|ref|YP_003709028.1|	-	0.082	12.9	0.0	0.12	12.4	0.0	1.2	1	0	0	1	1	1	0	PrgU-like	protein
Catalase	PF00199.19	gi|297620892|ref|YP_003709029.1|	-	6.8e-183	608.1	0.1	8.7e-183	607.7	0.1	1.1	1	0	0	1	1	1	1	Catalase
Catalase-rel	PF06628.12	gi|297620892|ref|YP_003709029.1|	-	3e-19	69.0	0.1	6e-19	68.0	0.1	1.5	1	0	0	1	1	1	1	Catalase-related	immune-responsive
Transposase_mut	PF00872.18	gi|297620893|ref|YP_003709030.1|	-	3.4e-70	236.8	0.0	4.3e-70	236.5	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297620893|ref|YP_003709030.1|	-	0.00022	21.6	0.0	0.00083	19.7	0.0	2.0	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.6	gi|297620893|ref|YP_003709030.1|	-	0.08	13.2	0.0	0.31	11.3	0.0	2.1	1	1	0	1	1	1	0	DDE	domain
Peptidase_M15_4	PF13539.6	gi|297620894|ref|YP_003709031.1|	-	2.3e-20	72.9	0.0	4.8e-20	71.8	0.0	1.6	1	0	0	1	1	1	1	D-alanyl-D-alanine	carboxypeptidase
NRD1_2	PF01995.16	gi|297620894|ref|YP_003709031.1|	-	0.036	13.4	0.0	0.051	12.8	0.0	1.1	1	0	0	1	1	1	0	NrpR	regulatory	domains	NRD1	and	2
HisK_N	PF09385.10	gi|297620894|ref|YP_003709031.1|	-	0.041	13.9	0.1	0.059	13.3	0.1	1.3	1	0	0	1	1	1	0	Histidine	kinase	N	terminal
DUF4050	PF13259.6	gi|297620894|ref|YP_003709031.1|	-	0.2	12.0	0.1	0.32	11.3	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4050)
rve	PF00665.26	gi|297620895|ref|YP_003709032.1|	-	4.4e-21	75.3	0.0	6.4e-21	74.7	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297620895|ref|YP_003709032.1|	-	3.9e-15	55.7	0.8	8.4e-15	54.7	0.8	1.6	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.6	gi|297620895|ref|YP_003709032.1|	-	1.9e-12	46.8	0.2	3.7e-12	45.8	0.2	1.5	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297620895|ref|YP_003709032.1|	-	0.0011	19.5	0.4	0.0011	19.5	0.4	2.4	3	0	0	3	3	3	1	Homeodomain-like	domain
rve_2	PF13333.6	gi|297620895|ref|YP_003709032.1|	-	0.01	16.0	1.0	0.021	15.0	1.0	1.5	1	0	0	1	1	1	0	Integrase	core	domain
PsiA	PF06952.11	gi|297620895|ref|YP_003709032.1|	-	0.029	13.6	3.5	0.75	9.0	0.0	2.3	2	1	0	2	2	2	0	PsiA	protein
HTH_Tnp_1	PF01527.20	gi|297620896|ref|YP_003709033.1|	-	3.2e-12	46.6	0.5	4.1e-12	46.2	0.5	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.6	gi|297620896|ref|YP_003709033.1|	-	0.00013	22.1	0.0	0.0002	21.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|297620896|ref|YP_003709033.1|	-	0.00035	20.3	0.0	0.00059	19.6	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
DDE_Tnp_1_3	PF13612.6	gi|297620897|ref|YP_003709034.1|	-	5.9e-15	55.6	0.0	7.6e-15	55.2	0.0	1.1	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.21	gi|297620897|ref|YP_003709034.1|	-	7.3e-10	38.8	0.0	1.3e-09	38.0	0.0	1.4	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.6	gi|297620897|ref|YP_003709034.1|	-	0.00017	21.3	0.1	0.00024	20.8	0.1	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
DDE_Tnp_IS1	PF03400.13	gi|297620898|ref|YP_003709035.1|	-	2.2e-11	44.2	0.1	4e-11	43.4	0.1	1.5	1	1	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.13	gi|297620898|ref|YP_003709035.1|	-	0.00071	19.3	2.7	0.0011	18.7	2.7	1.3	1	0	0	1	1	1	1	InsA	N-terminal	domain
DDE_Tnp_IS240	PF13610.6	gi|297620898|ref|YP_003709035.1|	-	0.0023	18.2	0.0	0.0039	17.4	0.0	1.5	1	0	0	1	1	1	1	DDE	domain
Zn-ribbon_8	PF09723.10	gi|297620898|ref|YP_003709035.1|	-	0.06	13.5	3.3	5.4	7.2	0.3	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|297620898|ref|YP_003709035.1|	-	0.61	10.8	5.5	0.7	10.6	0.7	2.8	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DDE_Tnp_IS1	PF03400.13	gi|297620899|ref|YP_003709036.1|	-	2.2e-07	31.2	0.1	2.3e-07	31.2	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.6	gi|297620899|ref|YP_003709036.1|	-	0.0018	18.0	0.1	0.0024	17.6	0.1	1.3	1	0	0	1	1	1	1	Integrase	core	domain
zf-SAP30	PF13866.6	gi|297620899|ref|YP_003709036.1|	-	0.039	14.1	1.7	0.17	12.1	1.7	2.0	1	1	0	1	1	1	0	SAP30	zinc-finger
DDE_3	PF13358.6	gi|297620901|ref|YP_003709038.1|	-	1.6e-30	105.8	0.0	2.6e-30	105.1	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.6	gi|297620901|ref|YP_003709038.1|	-	3.4e-17	61.8	0.1	1e-16	60.3	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|297620901|ref|YP_003709038.1|	-	1.8e-06	27.9	0.0	6.4e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|297620901|ref|YP_003709038.1|	-	9e-06	25.3	0.0	2.2e-05	24.1	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297620901|ref|YP_003709038.1|	-	1.3e-05	25.2	0.0	4.8e-05	23.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.26	gi|297620901|ref|YP_003709038.1|	-	3.5e-05	24.0	0.0	0.00038	20.6	0.0	2.2	2	0	0	2	2	2	1	Integrase	core	domain
DDE_Tnp_ISAZ013	PF07592.11	gi|297620901|ref|YP_003709038.1|	-	0.00011	21.4	0.3	0.21	10.5	0.1	2.2	2	0	0	2	2	2	2	Rhodopirellula	transposase	DDE	domain
Sigma70_r4_2	PF08281.12	gi|297620901|ref|YP_003709038.1|	-	0.00037	20.1	0.0	0.00077	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Terminase_5	PF06056.12	gi|297620901|ref|YP_003709038.1|	-	0.00062	19.6	0.0	0.0013	18.5	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_40	PF14493.6	gi|297620901|ref|YP_003709038.1|	-	0.0036	17.7	0.1	0.016	15.7	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|297620901|ref|YP_003709038.1|	-	0.0063	16.0	0.0	0.017	14.6	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
rve_3	PF13683.6	gi|297620901|ref|YP_003709038.1|	-	0.031	14.1	0.0	0.095	12.5	0.0	1.9	1	0	0	1	1	1	0	Integrase	core	domain
HTH_38	PF13936.6	gi|297620901|ref|YP_003709038.1|	-	0.038	13.8	1.6	0.43	10.4	0.0	2.7	3	0	0	3	3	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|297620901|ref|YP_003709038.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.7	gi|297620901|ref|YP_003709038.1|	-	0.13	12.3	0.0	0.28	11.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.19	gi|297620901|ref|YP_003709038.1|	-	0.16	11.5	0.0	0.65	9.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.6	gi|297620901|ref|YP_003709038.1|	-	0.86	9.9	3.6	5.9	7.2	0.1	3.1	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
HTH_3	PF01381.22	gi|297620902|ref|YP_003709039.1|	-	9.9e-13	47.9	0.0	1.4e-12	47.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.6	gi|297620902|ref|YP_003709039.1|	-	4.4e-10	39.8	0.0	5.2e-10	39.5	0.0	1.0	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.7	gi|297620902|ref|YP_003709039.1|	-	0.00037	20.5	0.0	0.00042	20.3	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.6	gi|297620902|ref|YP_003709039.1|	-	0.0019	18.6	0.0	0.0024	18.2	0.0	1.1	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
RAMPs	PF03787.15	gi|297620903|ref|YP_003709040.1|	-	0.0032	17.5	0.1	0.36	10.8	0.1	2.2	1	1	0	1	1	1	1	RAMP	superfamily
CRISPR_Cas6	PF10040.9	gi|297620903|ref|YP_003709040.1|	-	0.15	12.8	0.0	0.17	12.5	0.0	1.3	1	1	0	1	1	1	0	CRISPR-associated	endoribonuclease	Cas6
HNH	PF01844.23	gi|297620904|ref|YP_003709041.1|	-	3.1e-09	36.9	2.5	4.2e-09	36.4	2.5	1.2	1	0	0	1	1	1	1	HNH	endonuclease
HNH_5	PF14279.6	gi|297620904|ref|YP_003709041.1|	-	6.9e-06	25.8	0.7	9.7e-06	25.4	0.7	1.2	1	0	0	1	1	1	1	HNH	endonuclease
Cytochrome_C7	PF14522.6	gi|297620904|ref|YP_003709041.1|	-	0.063	13.3	0.3	0.086	12.9	0.3	1.2	1	0	0	1	1	1	0	Cytochrome	c7	and	related	cytochrome	c
Zn_ribbon_SprT	PF17283.2	gi|297620904|ref|YP_003709041.1|	-	7.3	6.6	9.7	2	8.4	0.7	2.3	1	1	1	2	2	2	0	SprT-like	zinc	ribbon	domain
FAM92	PF06730.11	gi|297620905|ref|YP_003709042.1|	-	0.42	10.0	3.3	0.28	10.6	0.3	1.8	2	0	0	2	2	2	0	FAM92	protein
DnaB_C	PF03796.15	gi|297620906|ref|YP_003709043.1|	-	1.1e-48	165.8	0.0	1.3e-48	165.6	0.0	1.0	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_25	PF13481.6	gi|297620906|ref|YP_003709043.1|	-	0.00014	21.5	0.0	0.00018	21.1	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_31	PF13614.6	gi|297620906|ref|YP_003709043.1|	-	0.059	13.3	2.1	0.098	12.6	2.1	1.2	1	0	0	1	1	1	0	AAA	domain
SapB_1	PF05184.15	gi|297620906|ref|YP_003709043.1|	-	1.7	8.7	3.6	1.4	9.1	0.2	2.7	3	0	0	3	3	3	0	Saposin-like	type	B,	region	1
LRR_6	PF13516.6	gi|297620908|ref|YP_003709045.1|	-	0.026	14.6	0.3	1.9	8.7	0.0	3.6	4	0	0	4	4	4	0	Leucine	Rich	repeat
HTH_Tnp_1	PF01527.20	gi|297620908|ref|YP_003709045.1|	-	0.057	13.7	0.2	0.25	11.7	0.0	2.2	2	0	0	2	2	2	0	Transposase
GP3_package	PF16677.5	gi|297620909|ref|YP_003709046.1|	-	0.0011	19.1	0.0	0.0015	18.6	0.0	1.2	1	0	0	1	1	1	1	DNA-packaging	protein	gp3
AAA_25	PF13481.6	gi|297620910|ref|YP_003709047.1|	-	1.1e-24	87.2	0.0	6e-24	84.7	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
Toprim_3	PF13362.6	gi|297620910|ref|YP_003709047.1|	-	1.2e-09	38.4	0.0	2.3e-09	37.5	0.0	1.5	1	0	0	1	1	1	1	Toprim	domain
Toprim_4	PF13662.6	gi|297620910|ref|YP_003709047.1|	-	1e-07	32.3	0.0	4e-07	30.4	0.0	2.0	2	0	0	2	2	1	1	Toprim	domain
HTH_24	PF13412.6	gi|297620910|ref|YP_003709047.1|	-	1.1e-06	28.1	0.0	2e-06	27.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|297620910|ref|YP_003709047.1|	-	0.008	16.0	0.0	0.017	15.0	0.0	1.5	1	0	0	1	1	1	1	MarR	family
DnaB_C	PF03796.15	gi|297620910|ref|YP_003709047.1|	-	0.039	13.3	0.0	0.43	9.9	0.0	2.3	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
HTH_26	PF13443.6	gi|297620910|ref|YP_003709047.1|	-	0.039	14.4	0.0	0.14	12.6	0.0	1.9	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
AAA_24	PF13479.6	gi|297620910|ref|YP_003709047.1|	-	0.059	13.1	0.1	0.49	10.1	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
MarR	PF01047.22	gi|297620910|ref|YP_003709047.1|	-	0.074	13.0	0.0	0.16	11.9	0.0	1.6	1	0	0	1	1	1	0	MarR	family
AAA	PF00004.29	gi|297620910|ref|YP_003709047.1|	-	0.1	13.0	0.2	3.4	8.1	0.0	3.0	2	1	1	3	3	3	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_28	PF13518.6	gi|297620910|ref|YP_003709047.1|	-	0.11	12.7	0.0	0.24	11.5	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF3654	PF12376.8	gi|297620910|ref|YP_003709047.1|	-	0.25	11.5	4.8	0.82	9.9	2.5	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3654)
Phage_integrase	PF00589.22	gi|297620911|ref|YP_003709048.1|	-	3.2e-08	33.6	0.6	6.6e-08	32.5	0.6	1.5	1	0	0	1	1	1	1	Phage	integrase	family
FAM92	PF06730.11	gi|297620911|ref|YP_003709048.1|	-	0.0035	16.8	0.2	0.0062	16.0	0.2	1.4	1	0	0	1	1	1	1	FAM92	protein
Hydantoinase_B	PF02538.14	gi|297620911|ref|YP_003709048.1|	-	0.28	9.5	0.0	0.42	9.0	0.0	1.2	1	0	0	1	1	1	0	Hydantoinase	B/oxoprolinase
Phage_integrase	PF00589.22	gi|297620912|ref|YP_003709049.1|	-	2.4e-30	105.6	0.1	4.6e-30	104.7	0.1	1.4	1	0	0	1	1	1	1	Phage	integrase	family
Phage_integr_3	PF16795.5	gi|297620912|ref|YP_003709049.1|	-	0.0085	16.0	0.1	0.08	12.9	0.0	2.2	2	0	0	2	2	2	1	Archaeal	phage	integrase
DUF3435	PF11917.8	gi|297620912|ref|YP_003709049.1|	-	0.012	14.6	0.1	0.028	13.4	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3435)
Peptidase_M32	PF02074.15	gi|297620914|ref|YP_003709051.1|	-	3.2e-178	593.5	0.0	3.6e-178	593.3	0.0	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
Neuromodulin_N	PF10580.9	gi|297620914|ref|YP_003709051.1|	-	0.17	11.7	0.1	0.52	10.2	0.1	1.9	1	0	0	1	1	1	0	Gap	junction	protein	N-terminal	region
Ala_racemase_N	PF01168.20	gi|297620915|ref|YP_003709052.1|	-	5.6e-64	215.8	0.0	9.2e-64	215.1	0.0	1.4	1	0	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
Ala_racemase_C	PF00842.21	gi|297620915|ref|YP_003709052.1|	-	3.8e-35	120.4	0.0	7.8e-35	119.4	0.0	1.6	1	0	0	1	1	1	1	Alanine	racemase,	C-terminal	domain
Mur_ligase_M	PF08245.12	gi|297620915|ref|YP_003709052.1|	-	6.7e-17	62.1	0.0	1.2e-16	61.3	0.0	1.4	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase	PF01225.25	gi|297620915|ref|YP_003709052.1|	-	0.064	13.6	0.0	0.37	11.1	0.0	2.4	3	0	0	3	3	3	0	Mur	ligase	family,	catalytic	domain
LptF_LptG	PF03739.14	gi|297620917|ref|YP_003709054.1|	-	5.3e-42	143.9	8.5	5.2e-40	137.4	8.5	2.0	1	1	0	1	1	1	1	Lipopolysaccharide	export	system	permease	LptF/LptG
DUF4131	PF13567.6	gi|297620917|ref|YP_003709054.1|	-	3.3	7.4	6.6	7.8	6.1	2.9	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
DUF3561	PF12084.8	gi|297620917|ref|YP_003709054.1|	-	6.4	6.8	10.8	1.6	8.8	0.4	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3561)
LptF_LptG	PF03739.14	gi|297620918|ref|YP_003709055.1|	-	1.1e-46	159.3	7.9	1.2e-46	159.2	7.9	1.0	1	0	0	1	1	1	1	Lipopolysaccharide	export	system	permease	LptF/LptG
GYF_2	PF14237.6	gi|297620919|ref|YP_003709056.1|	-	2.9e-16	59.0	0.2	5.3e-16	58.2	0.2	1.4	1	0	0	1	1	1	1	GYF	domain	2
ATP_bind_3	PF01171.20	gi|297620920|ref|YP_003709057.1|	-	2.8e-48	164.1	0.0	4.2e-48	163.5	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
Asn_synthase	PF00733.21	gi|297620920|ref|YP_003709057.1|	-	0.0015	18.3	0.0	0.0025	17.5	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
PAPS_reduct	PF01507.19	gi|297620920|ref|YP_003709057.1|	-	0.14	12.2	0.0	0.2	11.7	0.0	1.3	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
Peptidase_M41	PF01434.18	gi|297620921|ref|YP_003709058.1|	-	1.5e-70	236.9	0.4	2.9e-70	236.0	0.4	1.5	1	0	0	1	1	1	1	Peptidase	family	M41
AAA	PF00004.29	gi|297620921|ref|YP_003709058.1|	-	1.6e-44	151.5	1.3	5.2e-44	149.9	0.0	2.6	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|297620921|ref|YP_003709058.1|	-	1.3e-08	34.5	0.2	3.5e-08	33.1	0.2	1.7	1	0	0	1	1	1	1	AAA+	lid	domain
AAA_16	PF13191.6	gi|297620921|ref|YP_003709058.1|	-	3.6e-05	24.2	1.7	0.015	15.7	0.0	3.9	3	1	0	4	4	4	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|297620921|ref|YP_003709058.1|	-	0.00066	20.0	1.6	0.035	14.4	0.0	3.6	3	1	1	4	4	4	1	AAA	domain
AAA_5	PF07728.14	gi|297620921|ref|YP_003709058.1|	-	0.0014	18.6	0.0	0.0092	16.0	0.0	2.4	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Zeta_toxin	PF06414.12	gi|297620921|ref|YP_003709058.1|	-	0.0047	16.2	1.5	0.55	9.5	0.1	2.9	3	0	0	3	3	3	1	Zeta	toxin
TIP49	PF06068.13	gi|297620921|ref|YP_003709058.1|	-	0.0053	16.0	0.0	0.01	15.1	0.0	1.4	1	0	0	1	1	1	1	TIP49	P-loop	domain
RuvB_N	PF05496.12	gi|297620921|ref|YP_003709058.1|	-	0.022	14.5	0.0	0.075	12.8	0.0	1.9	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
IstB_IS21	PF01695.17	gi|297620921|ref|YP_003709058.1|	-	0.023	14.4	0.0	0.048	13.4	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Mg_chelatase	PF01078.21	gi|297620921|ref|YP_003709058.1|	-	0.027	13.8	0.5	0.067	12.6	0.3	1.7	1	1	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_2	PF07724.14	gi|297620921|ref|YP_003709058.1|	-	0.038	14.1	0.3	0.15	12.2	0.0	2.2	3	0	0	3	3	2	0	AAA	domain	(Cdc48	subfamily)
AAA_7	PF12775.7	gi|297620921|ref|YP_003709058.1|	-	0.05	13.1	0.1	0.19	11.2	0.1	1.9	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
Exonuc_VII_S	PF02609.16	gi|297620921|ref|YP_003709058.1|	-	0.054	13.6	2.4	9.9	6.3	0.1	3.3	3	0	0	3	3	2	0	Exonuclease	VII	small	subunit
PhoH	PF02562.16	gi|297620921|ref|YP_003709058.1|	-	0.065	12.7	0.1	0.41	10.1	0.1	2.3	3	0	0	3	3	3	0	PhoH-like	protein
AAA_33	PF13671.6	gi|297620921|ref|YP_003709058.1|	-	0.072	13.2	0.0	0.22	11.7	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.6	gi|297620921|ref|YP_003709058.1|	-	0.081	13.4	1.1	0.2	12.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
LprI	PF07007.12	gi|297620921|ref|YP_003709058.1|	-	0.16	12.7	4.0	0.067	13.8	0.8	2.0	2	0	0	2	2	1	0	Lysozyme	inhibitor	LprI
RNase_PH	PF01138.21	gi|297620923|ref|YP_003709060.1|	-	7.5e-40	136.5	0.0	5.8e-20	72.1	0.0	2.5	2	0	0	2	2	2	2	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|297620923|ref|YP_003709060.1|	-	2.6e-21	75.4	2.1	4.1e-14	52.4	0.2	2.8	2	0	0	2	2	2	2	3'	exoribonuclease	family,	domain	2
S1	PF00575.23	gi|297620923|ref|YP_003709060.1|	-	1.2e-18	67.1	2.9	1.1e-17	64.2	2.3	2.4	2	0	0	2	2	2	1	S1	RNA	binding	domain
PNPase	PF03726.14	gi|297620923|ref|YP_003709060.1|	-	9.6e-17	61.3	2.9	2.4e-16	60.0	2.9	1.7	1	0	0	1	1	1	1	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
KH_1	PF00013.29	gi|297620923|ref|YP_003709060.1|	-	2.2e-12	46.6	2.5	5.7e-12	45.3	2.5	1.8	1	0	0	1	1	1	1	KH	domain
KH_2	PF07650.17	gi|297620923|ref|YP_003709060.1|	-	0.0029	17.4	0.6	0.0086	15.9	0.6	1.8	1	0	0	1	1	1	1	KH	domain
KH_5	PF13184.6	gi|297620923|ref|YP_003709060.1|	-	0.02	15.0	0.6	0.067	13.3	0.6	1.9	1	0	0	1	1	1	0	NusA-like	KH	domain
Ribosomal_S15	PF00312.22	gi|297620924|ref|YP_003709061.1|	-	7.3e-34	115.8	3.6	8.2e-34	115.7	3.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S15
Sporozoite_P67	PF05642.11	gi|297620924|ref|YP_003709061.1|	-	0.18	9.9	0.1	0.17	9.9	0.1	1.0	1	0	0	1	1	1	0	Sporozoite	P67	surface	antigen
MafB19-deam	PF14437.6	gi|297620926|ref|YP_003709063.1|	-	1.4e-26	92.9	0.0	1.7e-26	92.6	0.0	1.1	1	0	0	1	1	1	1	MafB19-like	deaminase
dCMP_cyt_deam_1	PF00383.23	gi|297620926|ref|YP_003709063.1|	-	2.9e-25	88.1	0.4	3.8e-25	87.7	0.4	1.2	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
APOBEC2	PF18772.1	gi|297620926|ref|YP_003709063.1|	-	0.0083	16.2	0.1	0.014	15.5	0.1	1.4	1	1	0	1	1	1	1	APOBEC2
SNAD4	PF18750.1	gi|297620926|ref|YP_003709063.1|	-	0.0092	16.1	0.1	0.019	15.1	0.1	1.4	1	0	0	1	1	1	1	Secreted	Novel	AID/APOBEC-like	Deaminase	4
NAD1	PF18778.1	gi|297620926|ref|YP_003709063.1|	-	0.013	15.6	0.2	0.024	14.8	0.2	1.5	1	1	0	1	1	1	0	Novel	AID	APOBEC	clade	1
Bd3614-deam	PF14439.6	gi|297620926|ref|YP_003709063.1|	-	0.029	14.4	3.7	0.065	13.3	1.5	2.0	1	1	1	2	2	2	0	Bd3614-like	deaminase
APOBEC3	PF18771.1	gi|297620926|ref|YP_003709063.1|	-	0.037	14.2	0.0	0.33	11.1	0.0	2.1	2	0	0	2	2	2	0	APOBEC3
APOBEC_N	PF08210.11	gi|297620926|ref|YP_003709063.1|	-	0.085	12.7	0.0	0.14	12.1	0.0	1.4	1	0	0	1	1	1	0	APOBEC-like	N-terminal	domain
Inv-AAD	PF18785.1	gi|297620926|ref|YP_003709063.1|	-	0.14	12.0	1.0	0.35	10.7	1.0	1.6	1	1	0	1	1	1	0	Invertebrate-AID/APOBEC-deaminase
FUSC-like	PF12805.7	gi|297620928|ref|YP_003709065.1|	-	0.018	14.2	0.1	0.034	13.2	0.0	1.4	1	1	0	1	1	1	0	FUSC-like	inner	membrane	protein	yccS
Rhomboid	PF01694.22	gi|297620929|ref|YP_003709066.1|	-	4.4e-10	39.7	17.6	4.4e-10	39.7	17.6	1.9	2	1	0	2	2	2	1	Rhomboid	family
DER1	PF04511.15	gi|297620929|ref|YP_003709066.1|	-	0.0022	17.9	12.6	0.0037	17.2	12.6	1.3	1	0	0	1	1	1	1	Der1-like	family
Ribosomal_L31	PF01197.18	gi|297620930|ref|YP_003709067.1|	-	9.6e-27	93.0	0.5	1.1e-26	92.8	0.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31
PCRF	PF03462.18	gi|297620931|ref|YP_003709068.1|	-	1.1e-62	211.3	0.9	1.7e-62	210.7	0.1	1.6	2	0	0	2	2	2	1	PCRF	domain
RF-1	PF00472.20	gi|297620931|ref|YP_003709068.1|	-	1.8e-42	144.0	2.0	4.3e-42	142.7	2.0	1.6	1	0	0	1	1	1	1	RF-1	domain
Allexi_40kDa	PF05549.11	gi|297620931|ref|YP_003709068.1|	-	0.17	11.4	3.1	0.084	12.4	1.0	1.5	2	0	0	2	2	2	0	Allexivirus	40kDa	protein
ABC_tran_CTD	PF16326.5	gi|297620931|ref|YP_003709068.1|	-	2.2	8.6	14.4	0.93	9.8	0.3	3.3	2	1	1	3	3	3	0	ABC	transporter	C-terminal	domain
CorA	PF01544.18	gi|297620931|ref|YP_003709068.1|	-	7.3	5.8	10.2	9.8	5.4	4.3	2.2	2	0	0	2	2	2	0	CorA-like	Mg2+	transporter	protein
MTS	PF05175.14	gi|297620932|ref|YP_003709069.1|	-	5.9e-19	68.2	0.0	1.5e-18	66.9	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	small	domain
PrmC_N	PF17827.1	gi|297620932|ref|YP_003709069.1|	-	1e-13	51.6	0.0	1.8e-13	50.8	0.0	1.4	1	0	0	1	1	1	1	PrmC	N-terminal	domain
Methyltransf_25	PF13649.6	gi|297620932|ref|YP_003709069.1|	-	1.6e-08	35.1	0.0	6e-08	33.3	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
PrmA	PF06325.13	gi|297620932|ref|YP_003709069.1|	-	1e-07	31.7	0.0	1.7e-07	30.9	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.6	gi|297620932|ref|YP_003709069.1|	-	9.6e-07	28.7	0.0	1.3e-06	28.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_2	PF00891.18	gi|297620932|ref|YP_003709069.1|	-	8.4e-05	22.0	0.0	0.00013	21.3	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase	domain
Methyltransf_16	PF10294.9	gi|297620932|ref|YP_003709069.1|	-	0.00014	21.7	0.0	0.0002	21.1	0.0	1.2	1	0	0	1	1	1	1	Lysine	methyltransferase
Methyltransf_18	PF12847.7	gi|297620932|ref|YP_003709069.1|	-	0.00017	21.5	0.0	0.00036	20.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297620932|ref|YP_003709069.1|	-	0.00029	21.4	0.0	0.00072	20.2	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297620932|ref|YP_003709069.1|	-	0.00031	21.4	0.0	0.0012	19.5	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
UPF0020	PF01170.18	gi|297620932|ref|YP_003709069.1|	-	0.0035	17.0	0.0	0.008	15.9	0.0	1.6	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Ubie_methyltran	PF01209.18	gi|297620932|ref|YP_003709069.1|	-	0.0049	16.2	0.1	0.007	15.7	0.1	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MethyltransfD12	PF02086.15	gi|297620932|ref|YP_003709069.1|	-	0.017	14.8	0.0	0.12	12.0	0.0	1.8	1	1	1	2	2	2	0	D12	class	N6	adenine-specific	DNA	methyltransferase
AviRa	PF11599.8	gi|297620932|ref|YP_003709069.1|	-	0.057	12.9	0.0	0.099	12.1	0.0	1.3	1	0	0	1	1	1	0	RRNA	methyltransferase	AviRa
Methyltransf_15	PF09445.10	gi|297620932|ref|YP_003709069.1|	-	0.066	12.8	0.0	0.096	12.3	0.0	1.2	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
SRP54	PF00448.22	gi|297620933|ref|YP_003709070.1|	-	5.6e-74	248.0	0.1	1e-73	247.1	0.1	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.19	gi|297620933|ref|YP_003709070.1|	-	1.4e-26	93.0	1.9	1.4e-26	93.0	1.9	3.2	4	1	0	4	4	3	1	Signal	peptide	binding	domain
SRP54_N	PF02881.19	gi|297620933|ref|YP_003709070.1|	-	2.3e-21	75.8	2.2	2.3e-21	75.8	2.2	3.1	4	0	0	4	4	4	1	SRP54-type	protein,	helical	bundle	domain
AAA_17	PF13207.6	gi|297620933|ref|YP_003709070.1|	-	2.7e-05	24.6	1.2	0.00019	21.8	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|297620933|ref|YP_003709070.1|	-	3.9e-05	23.9	0.0	0.00011	22.5	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|297620933|ref|YP_003709070.1|	-	0.00036	20.7	0.1	0.00084	19.5	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|297620933|ref|YP_003709070.1|	-	0.0018	18.4	0.9	0.0061	16.6	0.2	2.5	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Zeta_toxin	PF06414.12	gi|297620933|ref|YP_003709070.1|	-	0.004	16.5	0.3	0.019	14.2	0.1	2.2	2	0	0	2	2	2	1	Zeta	toxin
Thymidylate_kin	PF02223.17	gi|297620933|ref|YP_003709070.1|	-	0.0098	15.6	0.1	0.0098	15.6	0.1	2.3	3	0	0	3	3	3	1	Thymidylate	kinase
AAA_24	PF13479.6	gi|297620933|ref|YP_003709070.1|	-	0.018	14.8	0.1	0.11	12.2	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|297620933|ref|YP_003709070.1|	-	0.023	14.4	0.3	0.082	12.6	0.2	2.0	2	0	0	2	2	2	0	AAA	domain
CLP1_P	PF16575.5	gi|297620933|ref|YP_003709070.1|	-	0.026	14.3	0.1	1	9.2	0.0	2.3	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
APS_kinase	PF01583.20	gi|297620933|ref|YP_003709070.1|	-	0.026	14.4	0.1	0.12	12.3	0.0	2.0	2	0	0	2	2	2	0	Adenylylsulphate	kinase
NTPase_1	PF03266.15	gi|297620933|ref|YP_003709070.1|	-	0.033	14.1	0.5	0.75	9.7	0.1	2.5	2	0	0	2	2	2	0	NTPase
6PF2K	PF01591.18	gi|297620933|ref|YP_003709070.1|	-	0.062	12.6	0.0	0.19	11.0	0.0	1.8	2	0	0	2	2	2	0	6-phosphofructo-2-kinase
KTI12	PF08433.10	gi|297620933|ref|YP_003709070.1|	-	0.065	12.7	0.6	0.2	11.1	0.0	2.1	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
RHH_1	PF01402.21	gi|297620933|ref|YP_003709070.1|	-	0.076	13.0	3.0	14	5.8	0.0	3.1	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
ATP_bind_1	PF03029.17	gi|297620933|ref|YP_003709070.1|	-	0.12	12.1	0.9	0.31	10.8	0.1	2.1	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_25	PF13481.6	gi|297620933|ref|YP_003709070.1|	-	0.21	11.2	0.7	6.3	6.3	0.7	2.5	1	1	0	1	1	1	0	AAA	domain
DUF1542	PF07564.11	gi|297620933|ref|YP_003709070.1|	-	1.5	9.0	7.0	2.7	8.1	0.0	3.6	3	0	0	3	3	3	0	Domain	of	Unknown	Function	(DUF1542)
Ribosomal_S16	PF00886.19	gi|297620934|ref|YP_003709071.1|	-	1.1e-22	79.8	0.1	1.9e-22	79.1	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S16
tRNA_m1G_MT	PF01746.21	gi|297620935|ref|YP_003709072.1|	-	8.2e-64	214.9	0.0	9.4e-64	214.7	0.0	1.0	1	0	0	1	1	1	1	tRNA	(Guanine-1)-methyltransferase
Ribosomal_L19	PF01245.20	gi|297620936|ref|YP_003709073.1|	-	9.7e-47	157.5	2.0	1.4e-46	157.0	2.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L19
RNase_HII	PF01351.18	gi|297620937|ref|YP_003709074.1|	-	2.8e-31	108.9	0.0	3.9e-31	108.4	0.0	1.2	1	0	0	1	1	1	1	Ribonuclease	HII
AMP-binding	PF00501.28	gi|297620938|ref|YP_003709075.1|	-	5.2e-69	232.9	0.0	7.3e-69	232.4	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme
PP-binding	PF00550.25	gi|297620938|ref|YP_003709075.1|	-	2.1e-06	28.0	0.1	4.4e-06	27.0	0.1	1.6	1	0	0	1	1	1	1	Phosphopantetheine	attachment	site
Acyltransferase	PF01553.21	gi|297620938|ref|YP_003709075.1|	-	0.00025	20.7	0.0	0.0047	16.6	0.0	2.4	2	0	0	2	2	2	1	Acyltransferase
Ank_2	PF12796.7	gi|297620939|ref|YP_003709076.1|	-	1.2e-09	38.6	0.4	4.2e-09	36.9	0.0	2.1	2	0	0	2	2	2	1	Ankyrin	repeats	(3	copies)
Ank_4	PF13637.6	gi|297620939|ref|YP_003709076.1|	-	1.9e-09	37.9	0.7	4.9e-06	27.0	0.1	3.3	1	1	2	3	3	3	3	Ankyrin	repeats	(many	copies)
Ank_3	PF13606.6	gi|297620939|ref|YP_003709076.1|	-	3.2e-07	30.1	2.5	0.0098	16.3	0.1	4.3	5	0	0	5	5	5	2	Ankyrin	repeat
Ank	PF00023.30	gi|297620939|ref|YP_003709076.1|	-	8.6e-07	29.1	0.5	0.0047	17.3	0.3	3.2	2	0	0	2	2	2	2	Ankyrin	repeat
Ank_5	PF13857.6	gi|297620939|ref|YP_003709076.1|	-	0.026	14.8	0.1	2.9	8.3	0.0	3.0	1	1	2	3	3	3	0	Ankyrin	repeats	(many	copies)
DUF3638	PF12340.8	gi|297620940|ref|YP_003709077.1|	-	2.3e-07	30.4	0.0	4.7e-06	26.1	0.0	2.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3638)
DUF1722	PF08349.11	gi|297620940|ref|YP_003709077.1|	-	0.93	9.8	4.3	5.9	7.2	1.3	4.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1722)
YicC_N	PF03755.13	gi|297620941|ref|YP_003709078.1|	-	9.2e-36	123.6	0.7	5.1e-35	121.2	0.0	2.2	2	1	0	2	2	2	1	YicC-like	family,	N-terminal	region
DUF1732	PF08340.11	gi|297620941|ref|YP_003709078.1|	-	2.2e-33	114.1	4.7	2.2e-33	114.1	4.7	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1732)
RNase_E_G	PF10150.9	gi|297620941|ref|YP_003709078.1|	-	0.0044	16.5	3.9	0.0045	16.4	2.8	1.5	1	1	0	1	1	1	1	Ribonuclease	E/G	family
FapA	PF03961.13	gi|297620941|ref|YP_003709078.1|	-	0.52	8.9	6.0	0.8	8.2	6.0	1.3	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
DUF2408	PF10303.9	gi|297620941|ref|YP_003709078.1|	-	0.63	10.6	11.0	0.33	11.5	4.8	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2408)
DUF4460	PF14687.6	gi|297620941|ref|YP_003709078.1|	-	1.1	9.3	5.8	0.36	10.9	0.8	2.5	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4460)
Muted	PF14942.6	gi|297620941|ref|YP_003709078.1|	-	2.2	8.6	12.6	0.5	10.7	7.9	2.2	1	1	1	2	2	2	0	Organelle	biogenesis,	Muted-like	protein
Guanylate_kin	PF00625.21	gi|297620942|ref|YP_003709079.1|	-	2e-45	154.7	0.0	2.4e-45	154.4	0.0	1.0	1	0	0	1	1	1	1	Guanylate	kinase
AAA_18	PF13238.6	gi|297620942|ref|YP_003709079.1|	-	4e-06	27.4	0.0	7e-06	26.6	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.23	gi|297620942|ref|YP_003709079.1|	-	0.0018	18.3	0.0	0.0057	16.7	0.0	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Thymidylate_kin	PF02223.17	gi|297620942|ref|YP_003709079.1|	-	0.0022	17.7	0.3	0.0055	16.4	0.1	1.7	1	1	1	2	2	2	1	Thymidylate	kinase
AAA_22	PF13401.6	gi|297620942|ref|YP_003709079.1|	-	0.0034	17.7	0.0	0.0072	16.6	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
TsaE	PF02367.17	gi|297620942|ref|YP_003709079.1|	-	0.0065	16.5	0.0	0.011	15.8	0.0	1.4	1	0	0	1	1	1	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_33	PF13671.6	gi|297620942|ref|YP_003709079.1|	-	0.0099	16.0	0.1	0.044	13.9	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
T2SSE	PF00437.20	gi|297620942|ref|YP_003709079.1|	-	0.02	14.0	0.0	0.029	13.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Rad17	PF03215.15	gi|297620942|ref|YP_003709079.1|	-	0.027	14.4	0.0	0.04	13.8	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_30	PF13604.6	gi|297620942|ref|YP_003709079.1|	-	0.04	13.6	0.0	0.072	12.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|297620942|ref|YP_003709079.1|	-	0.049	14.0	0.0	0.11	12.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
PIG-L	PF02585.17	gi|297620942|ref|YP_003709079.1|	-	0.067	13.8	0.0	0.13	12.9	0.0	1.4	1	0	0	1	1	1	0	GlcNAc-PI	de-N-acetylase
AAA_25	PF13481.6	gi|297620942|ref|YP_003709079.1|	-	0.074	12.6	0.8	0.47	10.0	0.0	2.3	3	0	0	3	3	3	0	AAA	domain
AAA_16	PF13191.6	gi|297620942|ref|YP_003709079.1|	-	0.11	12.9	0.1	0.16	12.3	0.1	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.29	gi|297620942|ref|YP_003709079.1|	-	0.12	12.8	0.0	0.2	12.1	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Adeno_PV	PF03910.13	gi|297620943|ref|YP_003709080.1|	-	0.13	11.0	2.0	0.16	10.7	2.0	1.1	1	0	0	1	1	1	0	Adenovirus	minor	core	protein	PV
2C_adapt	PF08793.10	gi|297620944|ref|YP_003709081.1|	-	0.11	12.7	0.3	0.23	11.7	0.3	1.5	1	0	0	1	1	1	0	2-cysteine	adaptor	domain
tRNA-synt_1g	PF09334.11	gi|297620945|ref|YP_003709082.1|	-	6.3e-141	469.6	0.0	8e-141	469.3	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA_bind	PF01588.20	gi|297620945|ref|YP_003709082.1|	-	6.5e-27	93.5	0.8	1.2e-26	92.6	0.4	1.7	2	0	0	2	2	2	1	Putative	tRNA	binding	domain
tRNA-synt_1	PF00133.22	gi|297620945|ref|YP_003709082.1|	-	1.9e-20	72.7	2.4	6.9e-06	24.6	0.1	3.8	2	2	1	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|297620945|ref|YP_003709082.1|	-	5.2e-14	52.5	0.0	9.2e-14	51.7	0.0	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
Ribosomal_L28	PF00830.19	gi|297620946|ref|YP_003709083.1|	-	5e-21	74.7	3.6	7.1e-21	74.2	3.6	1.2	1	0	0	1	1	1	1	Ribosomal	L28	family
Antimicrobial_3	PF08025.11	gi|297620946|ref|YP_003709083.1|	-	3.6	7.6	6.2	11	6.1	2.5	2.6	2	1	0	2	2	2	0	Spider	antimicrobial	peptide
Peptidase_M13_N	PF05649.13	gi|297620947|ref|YP_003709084.1|	-	2.2e-80	271.2	0.2	3.3e-80	270.6	0.2	1.3	1	0	0	1	1	1	1	Peptidase	family	M13
Peptidase_M13	PF01431.21	gi|297620947|ref|YP_003709084.1|	-	1.4e-58	197.9	0.0	2.4e-58	197.1	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	M13
zf-FCS	PF06467.14	gi|297620947|ref|YP_003709084.1|	-	0.0028	17.5	2.8	0.0067	16.3	2.8	1.7	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF1272	PF06906.11	gi|297620947|ref|YP_003709084.1|	-	0.34	11.1	2.6	0.88	9.7	2.6	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
RecG_N	PF17190.4	gi|297620948|ref|YP_003709085.1|	-	0.014	16.1	6.5	0.027	15.2	6.2	1.7	1	1	0	1	1	1	0	RecG	N-terminal	helical	domain
DUF4121	PF13497.6	gi|297620948|ref|YP_003709085.1|	-	0.022	13.9	0.4	0.03	13.5	0.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4121)
HTH_19	PF12844.7	gi|297620948|ref|YP_003709085.1|	-	0.025	14.6	4.7	0.11	12.6	1.6	2.5	1	1	0	2	2	2	0	Helix-turn-helix	domain
PAH	PF02671.21	gi|297620948|ref|YP_003709085.1|	-	0.15	12.2	1.1	1.6	8.9	0.1	2.4	2	0	0	2	2	2	0	Paired	amphipathic	helix	repeat
TMPIT	PF07851.13	gi|297620948|ref|YP_003709085.1|	-	0.28	10.4	4.2	0.33	10.2	4.2	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
Atg14	PF10186.9	gi|297620948|ref|YP_003709085.1|	-	0.29	10.2	8.0	0.32	10.0	8.0	1.1	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Pyr_redox_2	PF07992.14	gi|297620949|ref|YP_003709086.1|	-	3.4e-54	184.1	0.0	4.1e-54	183.8	0.0	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|297620949|ref|YP_003709086.1|	-	1.1e-26	93.2	0.3	3e-26	91.8	0.1	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.27	gi|297620949|ref|YP_003709086.1|	-	1.3e-21	77.0	0.5	2.5e-15	56.8	0.0	2.8	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|297620949|ref|YP_003709086.1|	-	2.8e-12	46.5	0.7	2.1e-06	27.2	0.0	2.4	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|297620949|ref|YP_003709086.1|	-	6e-10	39.2	0.4	2.5e-05	24.4	0.0	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
AlaDh_PNT_C	PF01262.21	gi|297620949|ref|YP_003709086.1|	-	5.5e-09	35.6	0.4	0.0014	17.9	0.0	2.2	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
HI0933_like	PF03486.14	gi|297620949|ref|YP_003709086.1|	-	5e-08	32.0	2.0	1.7e-06	27.0	0.6	2.7	3	0	0	3	3	3	1	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|297620949|ref|YP_003709086.1|	-	7e-08	32.2	0.0	1.8e-07	30.9	0.0	1.6	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|297620949|ref|YP_003709086.1|	-	2.9e-07	29.9	1.8	3.3e-07	29.8	0.3	1.8	2	0	0	2	2	2	1	FAD	binding	domain
DAO	PF01266.24	gi|297620949|ref|YP_003709086.1|	-	3.2e-06	27.0	1.6	0.0076	15.9	0.1	2.7	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|297620949|ref|YP_003709086.1|	-	3.3e-06	26.4	0.1	0.0004	19.6	0.1	2.8	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
FAD_binding_3	PF01494.19	gi|297620949|ref|YP_003709086.1|	-	8.3e-06	25.3	0.5	0.0083	15.4	0.1	2.2	2	0	0	2	2	2	2	FAD	binding	domain
TrkA_N	PF02254.18	gi|297620949|ref|YP_003709086.1|	-	2.3e-05	24.6	0.1	0.6	10.4	0.0	3.4	4	0	0	4	4	4	2	TrkA-N	domain
XdhC_C	PF13478.6	gi|297620949|ref|YP_003709086.1|	-	0.00015	22.2	0.1	0.97	9.9	0.0	3.0	2	1	0	3	3	3	2	XdhC	Rossmann	domain
NAD_binding_7	PF13241.6	gi|297620949|ref|YP_003709086.1|	-	0.0002	21.7	0.0	0.22	12.0	0.0	2.4	2	0	0	2	2	2	2	Putative	NAD(P)-binding
3HCDH_N	PF02737.18	gi|297620949|ref|YP_003709086.1|	-	0.00027	20.9	0.9	0.015	15.2	0.0	2.7	3	0	0	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Thi4	PF01946.17	gi|297620949|ref|YP_003709086.1|	-	0.0014	17.9	0.1	0.0025	17.1	0.1	1.4	1	0	0	1	1	1	1	Thi4	family
Lycopene_cycl	PF05834.12	gi|297620949|ref|YP_003709086.1|	-	0.0023	17.0	0.0	0.0097	15.0	0.0	2.0	3	0	0	3	3	3	1	Lycopene	cyclase	protein
2-Hacid_dh_C	PF02826.19	gi|297620949|ref|YP_003709086.1|	-	0.0034	16.7	2.9	0.23	10.8	0.0	2.9	3	0	0	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|297620949|ref|YP_003709086.1|	-	0.01	15.4	0.4	0.54	9.8	0.1	2.5	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
K_oxygenase	PF13434.6	gi|297620949|ref|YP_003709086.1|	-	0.014	14.5	0.0	0.11	11.6	0.0	2.0	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
DHHC	PF01529.20	gi|297620950|ref|YP_003709087.1|	-	0.49	10.5	5.6	0.71	10.0	5.6	1.3	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
E1-E2_ATPase	PF00122.20	gi|297620950|ref|YP_003709087.1|	-	3.2	7.2	5.4	6	6.4	5.4	1.5	1	1	0	1	1	1	0	E1-E2	ATPase
RRM_1	PF00076.22	gi|297620951|ref|YP_003709088.1|	-	3.4e-26	90.9	0.4	4.4e-26	90.5	0.4	1.1	1	0	0	1	1	1	1	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
RRM_occluded	PF16842.5	gi|297620951|ref|YP_003709088.1|	-	0.0025	17.6	0.0	0.0039	17.0	0.0	1.4	1	1	0	1	1	1	1	Occluded	RNA-recognition	motif
Nup35_RRM_2	PF14605.6	gi|297620951|ref|YP_003709088.1|	-	0.016	15.2	0.1	0.022	14.7	0.1	1.3	1	0	0	1	1	1	0	Nup53/35/40-type	RNA	recognition	motif
RRM_5	PF13893.6	gi|297620951|ref|YP_003709088.1|	-	0.025	14.2	0.0	0.028	14.0	0.0	1.2	1	0	0	1	1	1	0	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
Limkain-b1	PF11608.8	gi|297620951|ref|YP_003709088.1|	-	0.042	13.9	0.1	0.042	13.9	0.1	1.3	1	1	0	1	1	1	0	Limkain	b1
RRM_7	PF16367.5	gi|297620951|ref|YP_003709088.1|	-	0.12	12.5	0.0	0.27	11.4	0.0	1.7	1	1	0	1	1	1	0	RNA	recognition	motif
OB_RNB	PF08206.11	gi|297620951|ref|YP_003709088.1|	-	0.14	11.9	0.6	0.31	10.7	0.2	1.8	2	0	0	2	2	2	0	Ribonuclease	B	OB	domain
TPR_2	PF07719.17	gi|297620953|ref|YP_003709090.1|	-	8.8e-06	25.5	0.4	0.054	13.6	0.0	3.5	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297620953|ref|YP_003709090.1|	-	2.1e-05	24.1	0.7	0.23	11.4	0.0	3.7	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|297620953|ref|YP_003709090.1|	-	0.00058	20.0	0.0	1	9.6	0.0	2.3	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_3	PF07720.12	gi|297620953|ref|YP_003709090.1|	-	0.0083	16.1	0.5	0.076	13.0	0.4	2.4	2	0	0	2	2	2	1	Tetratricopeptide	repeat
LisH_2	PF16045.5	gi|297620953|ref|YP_003709090.1|	-	0.015	14.4	0.5	0.31	10.1	0.1	2.4	2	0	0	2	2	2	0	LisH
TPR_19	PF14559.6	gi|297620953|ref|YP_003709090.1|	-	0.015	15.8	0.0	0.14	12.7	0.0	2.6	3	0	0	3	3	3	0	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297620953|ref|YP_003709090.1|	-	0.029	14.6	0.5	1.2	9.4	0.2	2.3	1	1	1	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_7	PF13176.6	gi|297620953|ref|YP_003709090.1|	-	0.091	12.8	0.4	32	4.9	0.1	2.9	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297620953|ref|YP_003709090.1|	-	0.17	12.2	0.5	15	6.1	0.1	3.5	4	0	0	4	4	4	0	Tetratricopeptide	repeat
Malate_synthase	PF01274.22	gi|297620954|ref|YP_003709091.1|	-	2.5e-201	669.5	0.0	2.8e-201	669.3	0.0	1.0	1	0	0	1	1	1	1	Malate	synthase
HpcH_HpaI	PF03328.14	gi|297620954|ref|YP_003709091.1|	-	0.005	16.0	0.1	2.4	7.2	0.0	3.0	3	1	1	4	4	4	2	HpcH/HpaI	aldolase/citrate	lyase	family
DUF3499	PF12005.8	gi|297620954|ref|YP_003709091.1|	-	0.15	12.6	0.0	1.2	9.8	0.0	2.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3499)
ICL	PF00463.21	gi|297620955|ref|YP_003709092.1|	-	1.7e-102	343.7	1.2	5.8e-52	176.9	0.1	2.1	1	1	1	2	2	2	2	Isocitrate	lyase	family
PEP_mutase	PF13714.6	gi|297620955|ref|YP_003709092.1|	-	7.8e-19	68.1	0.2	1.1e-18	67.6	0.2	1.2	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
RRF_GI	PF12614.8	gi|297620955|ref|YP_003709092.1|	-	0.18	11.9	0.0	0.55	10.4	0.0	1.8	2	0	0	2	2	2	0	Ribosome	recycling	factor
EamA	PF00892.20	gi|297620956|ref|YP_003709093.1|	-	5e-18	65.6	22.2	1.2e-10	41.6	2.3	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
Peptidase_M24	PF00557.24	gi|297620957|ref|YP_003709094.1|	-	2.5e-46	158.0	0.0	4.3e-46	157.3	0.0	1.3	2	0	0	2	2	2	1	Metallopeptidase	family	M24
SEC-C	PF02810.15	gi|297620957|ref|YP_003709094.1|	-	1.4e-10	40.8	10.6	3.4e-10	39.7	10.6	1.7	1	0	0	1	1	1	1	SEC-C	motif
Methyltransf_4	PF02390.17	gi|297620958|ref|YP_003709095.1|	-	3.8e-46	156.7	0.0	4.8e-46	156.4	0.0	1.1	1	0	0	1	1	1	1	Putative	methyltransferase
MTS	PF05175.14	gi|297620958|ref|YP_003709095.1|	-	0.00016	21.3	0.0	0.00022	20.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|297620958|ref|YP_003709095.1|	-	0.0017	19.0	0.0	0.003	18.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Spermine_synth	PF01564.17	gi|297620958|ref|YP_003709095.1|	-	0.014	14.8	0.0	0.024	14.1	0.0	1.4	1	0	0	1	1	1	0	Spermine/spermidine	synthase	domain
NADPH_Ox	PF08414.10	gi|297620958|ref|YP_003709095.1|	-	0.079	13.3	0.1	1.4	9.3	0.1	2.3	2	0	0	2	2	2	0	Respiratory	burst	NADPH	oxidase
Methyltransf_31	PF13847.6	gi|297620958|ref|YP_003709095.1|	-	0.092	12.5	0.0	0.13	12.0	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
BshC	PF10079.9	gi|297620959|ref|YP_003709096.1|	-	1.8e-86	291.1	0.0	5e-84	283.0	0.0	2.0	1	1	0	1	1	1	1	Bacillithiol	biosynthesis	BshC
DUF5006	PF16397.5	gi|297620960|ref|YP_003709097.1|	-	0.087	12.0	0.0	5.5	6.1	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5006)
H_PPase	PF03030.16	gi|297620961|ref|YP_003709098.1|	-	1.2e-274	912.9	35.1	1.4e-274	912.8	35.1	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
DUF3144	PF11342.8	gi|297620961|ref|YP_003709098.1|	-	0.026	14.8	0.4	0.067	13.5	0.4	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3144)
DUF1634	PF07843.11	gi|297620961|ref|YP_003709098.1|	-	8.6	6.5	20.5	0.16	12.1	0.3	4.2	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1634)
PGI	PF00342.19	gi|297620962|ref|YP_003709099.1|	-	3.5e-123	411.8	0.0	7.2e-123	410.7	0.0	1.4	1	1	0	1	1	1	1	Phosphoglucose	isomerase
Phage_integrase	PF00589.22	gi|297620964|ref|YP_003709101.1|	-	4.1e-50	169.9	0.0	5.8e-50	169.4	0.0	1.2	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.17	gi|297620964|ref|YP_003709101.1|	-	9.3e-23	80.3	0.2	4.4e-21	75.0	0.0	2.8	2	1	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.6	gi|297620964|ref|YP_003709101.1|	-	2.4e-13	50.4	0.0	9.3e-13	48.5	0.0	2.0	2	0	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_5	PF13102.6	gi|297620964|ref|YP_003709101.1|	-	2.6e-05	24.5	0.0	0.037	14.3	0.0	2.6	1	1	1	2	2	2	2	Phage	integrase	SAM-like	domain
Phage_int_SAM_6	PF18644.1	gi|297620964|ref|YP_003709101.1|	-	0.00062	19.8	0.1	0.0015	18.6	0.1	1.6	1	0	0	1	1	1	1	Phage	integrase	SAM-like	domain
Integrase_1	PF12835.7	gi|297620964|ref|YP_003709101.1|	-	0.032	14.4	0.0	0.056	13.6	0.0	1.4	1	0	0	1	1	1	0	Integrase
DUF3161	PF11362.8	gi|297620964|ref|YP_003709101.1|	-	0.08	12.9	0.0	3	7.9	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3161)
Phage_integr_3	PF16795.5	gi|297620964|ref|YP_003709101.1|	-	0.087	12.7	0.0	0.49	10.3	0.0	2.2	2	0	0	2	2	2	0	Archaeal	phage	integrase
TPR_19	PF14559.6	gi|297620966|ref|YP_003709103.1|	-	7.4e-11	42.4	0.6	2.3e-06	28.0	0.8	2.4	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|297620966|ref|YP_003709103.1|	-	7e-10	39.4	1.7	0.00079	20.0	0.0	2.3	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297620966|ref|YP_003709103.1|	-	2e-07	30.6	2.0	0.21	11.8	0.1	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|297620966|ref|YP_003709103.1|	-	2.3e-07	30.4	1.2	0.043	13.5	0.0	3.3	2	1	1	3	3	3	2	TPR	repeat
TPR_1	PF00515.28	gi|297620966|ref|YP_003709103.1|	-	1.4e-06	27.8	1.4	0.058	13.2	0.0	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_3	PF07720.12	gi|297620966|ref|YP_003709103.1|	-	8.7e-06	25.6	6.3	0.051	13.6	0.0	4.0	4	1	1	5	5	5	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|297620966|ref|YP_003709103.1|	-	6.5e-05	23.4	0.8	0.95	10.5	0.0	3.1	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|297620966|ref|YP_003709103.1|	-	9.1e-05	22.6	0.0	0.43	11.1	0.1	2.7	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|297620966|ref|YP_003709103.1|	-	0.00042	20.4	0.1	0.0073	16.4	0.1	2.1	1	1	1	2	2	2	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297620966|ref|YP_003709103.1|	-	0.0023	18.1	3.6	0.23	11.7	0.2	2.3	1	1	0	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_6	PF13174.6	gi|297620966|ref|YP_003709103.1|	-	0.0033	17.9	1.7	1.4	9.8	0.2	3.3	3	0	0	3	3	3	1	Tetratricopeptide	repeat
SgrR_N	PF12793.7	gi|297620966|ref|YP_003709103.1|	-	0.0085	16.3	0.0	0.017	15.4	0.0	1.4	1	0	0	1	1	1	1	Sugar	transport-related	sRNA	regulator	N-term
TPR_7	PF13176.6	gi|297620966|ref|YP_003709103.1|	-	0.01	15.8	0.2	6.6	7.0	0.0	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
HrpB1_HrpK	PF09613.10	gi|297620966|ref|YP_003709103.1|	-	0.044	13.4	0.0	0.075	12.7	0.0	1.4	1	1	0	1	1	1	0	Bacterial	type	III	secretion	protein	(HrpB1_HrpK)
TPR_20	PF14561.6	gi|297620966|ref|YP_003709103.1|	-	0.05	13.9	0.7	4.3	7.8	0.1	2.6	1	1	2	3	3	3	0	Tetratricopeptide	repeat
Lum_binding	PF00677.17	gi|297620967|ref|YP_003709104.1|	-	2.5e-39	133.2	0.2	6.4e-20	70.9	0.0	2.0	2	0	0	2	2	2	2	Lumazine	binding	domain
MazE_antitoxin	PF04014.18	gi|297620967|ref|YP_003709104.1|	-	0.01	15.7	0.2	5.8	7.0	0.0	2.8	2	1	0	2	2	2	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
Toluene_X	PF03349.16	gi|297620968|ref|YP_003709105.1|	-	5.4e-41	140.6	0.0	6.3e-41	140.3	0.0	1.0	1	0	0	1	1	1	1	Outer	membrane	protein	transport	protein	(OMPP1/FadL/TodX)
DUF2490	PF10677.9	gi|297620968|ref|YP_003709105.1|	-	0.00012	22.1	0.0	0.00089	19.2	0.0	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2490)
HigB_toxin	PF09907.9	gi|297620968|ref|YP_003709105.1|	-	0.069	13.4	0.0	0.12	12.6	0.0	1.3	1	0	0	1	1	1	0	HigB_toxin,	RelE-like	toxic	component	of	a	toxin-antitoxin	system
DDE_Tnp_1	PF01609.21	gi|297620969|ref|YP_003709106.1|	-	4.9e-15	55.8	0.0	5.5e-15	55.6	0.0	1.0	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.6	gi|297620969|ref|YP_003709106.1|	-	3e-10	40.3	0.1	4.3e-10	39.8	0.1	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.6	gi|297620969|ref|YP_003709106.1|	-	0.0021	18.1	0.0	0.0057	16.7	0.0	1.6	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.6	gi|297620969|ref|YP_003709106.1|	-	0.025	14.3	0.0	0.03	14.0	0.0	1.1	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
UvdE	PF03851.14	gi|297620969|ref|YP_003709106.1|	-	0.18	11.1	0.0	0.23	10.6	0.0	1.3	1	0	0	1	1	1	0	UV-endonuclease	UvdE
DUF4096	PF13340.6	gi|297620970|ref|YP_003709107.1|	-	2.1e-16	59.9	0.7	2.1e-16	59.9	0.7	1.8	2	1	0	2	2	2	1	Putative	transposase	of	IS4/5	family	(DUF4096)
Toluene_X	PF03349.16	gi|297620971|ref|YP_003709108.1|	-	1.2e-49	169.1	0.8	1.4e-49	168.8	0.8	1.0	1	0	0	1	1	1	1	Outer	membrane	protein	transport	protein	(OMPP1/FadL/TodX)
Asparaginase_II	PF06089.12	gi|297620972|ref|YP_003709109.1|	-	1e-93	313.9	0.1	1.2e-93	313.7	0.1	1.0	1	0	0	1	1	1	1	L-asparaginase	II
Ten1_2	PF15490.6	gi|297620972|ref|YP_003709109.1|	-	0.021	14.5	0.0	0.033	13.9	0.0	1.3	1	0	0	1	1	1	0	Telomere-capping,	CST	complex	subunit
CBS	PF00571.28	gi|297620972|ref|YP_003709109.1|	-	0.32	11.5	0.7	6.8	7.2	0.3	2.5	1	1	1	2	2	2	0	CBS	domain
GatB_N	PF02934.15	gi|297620973|ref|YP_003709110.1|	-	2.6e-104	348.5	0.0	3.2e-104	348.2	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|297620973|ref|YP_003709110.1|	-	4.4e-42	143.4	0.0	6.9e-42	142.8	0.0	1.3	1	0	0	1	1	1	1	GatB	domain
Amidase	PF01425.21	gi|297620974|ref|YP_003709111.1|	-	2.1e-150	501.6	0.0	2.4e-150	501.4	0.0	1.0	1	0	0	1	1	1	1	Amidase
Glu-tRNAGln	PF02686.15	gi|297620975|ref|YP_003709112.1|	-	1e-21	77.0	1.3	1e-21	77.0	0.3	1.5	2	0	0	2	2	2	1	Glu-tRNAGln	amidotransferase	C	subunit
Nitr_red_bet_C	PF14711.6	gi|297620975|ref|YP_003709112.1|	-	0.11	12.2	0.0	0.2	11.4	0.0	1.5	1	1	0	1	1	1	0	Respiratory	nitrate	reductase	beta	C-terminal
His_kinase	PF06580.13	gi|297620975|ref|YP_003709112.1|	-	0.17	12.2	0.9	0.33	11.3	0.9	1.4	1	0	0	1	1	1	0	Histidine	kinase
UPF0449	PF15136.6	gi|297620976|ref|YP_003709113.1|	-	0.033	14.7	0.2	3.6	8.1	0.4	2.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0449
Redoxin	PF08534.10	gi|297620977|ref|YP_003709114.1|	-	8.9e-21	74.1	0.0	1e-20	73.9	0.0	1.1	1	0	0	1	1	1	1	Redoxin
AhpC-TSA	PF00578.21	gi|297620977|ref|YP_003709114.1|	-	2.8e-17	62.8	0.0	3.5e-17	62.5	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Thioredoxin_8	PF13905.6	gi|297620977|ref|YP_003709114.1|	-	0.00068	19.9	0.2	0.0011	19.3	0.2	1.2	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.6	gi|297620977|ref|YP_003709114.1|	-	0.0028	18.1	0.4	0.013	15.9	0.4	2.0	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.20	gi|297620977|ref|YP_003709114.1|	-	0.02	14.9	0.0	0.059	13.4	0.0	1.8	1	1	0	1	1	1	0	Thioredoxin
DUF1731	PF08338.11	gi|297620978|ref|YP_003709115.1|	-	1.1e-17	63.6	0.2	2e-17	62.8	0.2	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1731)
Epimerase	PF01370.21	gi|297620978|ref|YP_003709115.1|	-	7.8e-14	51.7	0.0	1.2e-13	51.1	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.17	gi|297620978|ref|YP_003709115.1|	-	0.0019	17.4	0.0	0.003	16.7	0.0	1.3	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
GDP_Man_Dehyd	PF16363.5	gi|297620978|ref|YP_003709115.1|	-	0.012	15.1	0.0	1.3	8.4	0.0	2.7	2	1	0	2	2	2	0	GDP-mannose	4,6	dehydratase
NAD_binding_10	PF13460.6	gi|297620978|ref|YP_003709115.1|	-	0.013	15.4	0.0	0.017	15.0	0.0	1.3	1	0	0	1	1	1	0	NAD(P)H-binding
NmrA	PF05368.13	gi|297620978|ref|YP_003709115.1|	-	0.058	12.9	0.0	0.085	12.4	0.0	1.3	1	0	0	1	1	1	0	NmrA-like	family
E1-E2_ATPase	PF00122.20	gi|297620979|ref|YP_003709116.1|	-	2.3e-41	141.3	0.0	2.3e-41	141.3	0.0	2.7	2	1	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|297620979|ref|YP_003709116.1|	-	2.3e-36	126.0	0.5	3.2e-36	125.6	0.5	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|297620979|ref|YP_003709116.1|	-	0.01	15.6	2.7	1.8	8.2	1.0	2.5	1	1	1	2	2	2	0	haloacid	dehalogenase-like	hydrolase
HTH_26	PF13443.6	gi|297620979|ref|YP_003709116.1|	-	0.014	15.8	0.0	0.033	14.6	0.0	1.6	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
Pribosyltran	PF00156.27	gi|297620980|ref|YP_003709117.1|	-	1.8e-17	63.3	0.0	2.2e-17	63.0	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PAC2	PF09754.9	gi|297620980|ref|YP_003709117.1|	-	0.023	14.7	0.0	0.028	14.4	0.0	1.1	1	0	0	1	1	1	0	PAC2	family
PRTase_2	PF15609.6	gi|297620980|ref|YP_003709117.1|	-	0.05	13.1	0.0	0.072	12.6	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
rve_3	PF13683.6	gi|297620981|ref|YP_003709118.1|	-	2.2e-08	33.8	0.0	4.2e-08	32.8	0.0	1.4	1	0	0	1	1	1	1	Integrase	core	domain
rve	PF00665.26	gi|297620981|ref|YP_003709118.1|	-	2.1e-06	27.9	0.0	3.7e-06	27.1	0.0	1.4	1	0	0	1	1	1	1	Integrase	core	domain
IstB_IS21	PF01695.17	gi|297620984|ref|YP_003709121.1|	-	2.2e-61	206.7	0.2	5e-61	205.5	0.1	1.6	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
Bac_DnaA	PF00308.18	gi|297620984|ref|YP_003709121.1|	-	1.3e-08	35.0	0.0	2e-08	34.4	0.0	1.2	1	0	0	1	1	1	1	Bacterial	dnaA	protein
PhoH	PF02562.16	gi|297620984|ref|YP_003709121.1|	-	0.00074	19.0	0.1	0.0019	17.7	0.1	1.7	1	1	0	1	1	1	1	PhoH-like	protein
AAA	PF00004.29	gi|297620984|ref|YP_003709121.1|	-	0.0041	17.5	0.0	0.0084	16.5	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|297620984|ref|YP_003709121.1|	-	0.017	15.4	0.1	0.19	12.0	0.1	2.4	1	1	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|297620984|ref|YP_003709121.1|	-	0.017	15.0	0.0	0.035	14.0	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
AAA_16	PF13191.6	gi|297620984|ref|YP_003709121.1|	-	0.021	15.2	0.3	0.04	14.3	0.1	1.8	2	1	0	2	2	2	0	AAA	ATPase	domain
ResIII	PF04851.15	gi|297620984|ref|YP_003709121.1|	-	0.026	14.5	0.1	0.037	14.0	0.1	1.6	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_18	PF13238.6	gi|297620984|ref|YP_003709121.1|	-	0.088	13.4	0.1	0.25	11.9	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
AAA_25	PF13481.6	gi|297620984|ref|YP_003709121.1|	-	0.12	12.0	0.0	0.22	11.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
CbiA	PF01656.23	gi|297620984|ref|YP_003709121.1|	-	0.12	12.4	0.0	0.26	11.3	0.0	1.7	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_33	PF13671.6	gi|297620984|ref|YP_003709121.1|	-	0.13	12.5	0.1	0.35	11.0	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_31	PF13614.6	gi|297620984|ref|YP_003709121.1|	-	0.14	12.1	0.6	1.3	9.0	0.2	2.5	2	1	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|297620984|ref|YP_003709121.1|	-	0.17	12.4	0.5	0.42	11.1	0.1	2.1	2	1	0	2	2	2	0	ABC	transporter
rve	PF00665.26	gi|297620985|ref|YP_003709122.1|	-	3.8e-26	91.6	0.0	6e-26	91.0	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_38	PF13936.6	gi|297620985|ref|YP_003709122.1|	-	8e-06	25.5	1.7	1e-05	25.2	0.4	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_29	PF13551.6	gi|297620985|ref|YP_003709122.1|	-	0.00012	22.1	0.0	0.00027	20.9	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_7	PF02796.15	gi|297620985|ref|YP_003709122.1|	-	0.00044	20.3	1.6	0.00072	19.6	0.2	2.1	2	1	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
HTH_23	PF13384.6	gi|297620985|ref|YP_003709122.1|	-	0.0011	18.7	0.1	0.0027	17.4	0.1	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
TnsD	PF15978.5	gi|297620985|ref|YP_003709122.1|	-	0.01	14.9	0.1	0.017	14.2	0.1	1.4	1	0	0	1	1	1	0	Tn7-like	transposition	protein	D
rve_3	PF13683.6	gi|297620985|ref|YP_003709122.1|	-	0.012	15.4	0.0	0.03	14.1	0.0	1.8	1	0	0	1	1	1	0	Integrase	core	domain
GerE	PF00196.19	gi|297620985|ref|YP_003709122.1|	-	0.014	14.9	0.0	0.026	14.1	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_56	PF18662.1	gi|297620985|ref|YP_003709122.1|	-	0.021	14.9	0.3	1.3	9.1	0.0	2.4	2	0	0	2	2	2	0	Cch	helix	turn	helix	domain
Phage_NinH	PF06322.11	gi|297620985|ref|YP_003709122.1|	-	0.045	13.6	0.0	0.093	12.6	0.0	1.5	1	0	0	1	1	1	0	Phage	NinH	protein
HTH_17	PF12728.7	gi|297620985|ref|YP_003709122.1|	-	0.057	13.6	0.2	0.27	11.5	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_3	PF01381.22	gi|297620985|ref|YP_003709122.1|	-	0.071	13.2	0.1	0.13	12.3	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix
HTH_40	PF14493.6	gi|297620985|ref|YP_003709122.1|	-	0.081	13.4	0.0	0.42	11.1	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_36	PF13730.6	gi|297620985|ref|YP_003709122.1|	-	0.16	12.0	1.1	0.43	10.6	0.1	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_30	PF13556.6	gi|297620985|ref|YP_003709122.1|	-	0.19	11.6	0.0	0.42	10.4	0.0	1.5	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
UCH	PF00443.29	gi|297620987|ref|YP_003709124.1|	-	3e-32	112.1	2.8	5e-32	111.4	0.0	2.5	2	1	0	3	3	3	1	Ubiquitin	carboxyl-terminal	hydrolase
IMPa_helical	PF18642.1	gi|297620987|ref|YP_003709124.1|	-	0.0025	18.2	0.1	0.0086	16.5	0.1	1.9	1	0	0	1	1	1	1	Immunomodulating	metalloprotease	helical	domain
FANCI_HD1	PF14679.6	gi|297620987|ref|YP_003709124.1|	-	0.58	10.2	3.7	5	7.1	0.1	3.6	4	0	0	4	4	4	0	FANCI	helical	domain	1
CENP-H	PF05837.12	gi|297620987|ref|YP_003709124.1|	-	0.73	10.3	7.2	0.91	10.0	4.6	2.6	2	0	0	2	2	2	0	Centromere	protein	H	(CENP-H)
Occludin_ELL	PF07303.13	gi|297620987|ref|YP_003709124.1|	-	3	8.6	19.1	0.53	11.0	1.7	4.6	4	1	0	4	4	4	0	Occludin	homology	domain
SMC_N	PF02463.19	gi|297620988|ref|YP_003709125.1|	-	1.7e-17	63.6	6.6	5.4e-17	62.0	6.6	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|297620988|ref|YP_003709125.1|	-	5.9e-10	40.0	28.3	6.6e-06	26.8	28.3	2.9	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|297620988|ref|YP_003709125.1|	-	3.6e-06	26.9	14.0	1.1e-05	25.3	14.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_21	PF13304.6	gi|297620988|ref|YP_003709125.1|	-	5.5e-05	23.1	1.6	0.094	12.5	0.0	2.7	2	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|297620988|ref|YP_003709125.1|	-	0.00053	19.7	0.0	0.0013	18.5	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|297620988|ref|YP_003709125.1|	-	0.033	14.5	4.7	0.11	12.7	0.0	3.7	4	1	0	4	4	4	0	AAA	domain
AAA_30	PF13604.6	gi|297620988|ref|YP_003709125.1|	-	0.049	13.4	0.2	0.37	10.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|297620988|ref|YP_003709125.1|	-	0.054	13.4	0.4	0.29	11.0	0.0	2.4	2	0	0	2	2	2	0	RsgA	GTPase
SIN1	PF05422.12	gi|297620988|ref|YP_003709125.1|	-	0.16	12.6	2.0	0.2	12.2	0.5	1.9	2	0	0	2	2	2	0	Stress-activated	map	kinase	interacting	protein	1	(SIN1)
ABC_tran	PF00005.27	gi|297620988|ref|YP_003709125.1|	-	0.67	10.5	0.0	0.67	10.5	0.0	3.1	2	1	0	2	2	2	0	ABC	transporter
Lyase_8_N	PF08124.11	gi|297620988|ref|YP_003709125.1|	-	0.86	8.5	3.6	3.7	6.4	0.5	2.3	2	0	0	2	2	2	0	Polysaccharide	lyase	family	8,	N	terminal	alpha-helical	domain
RNase_HII	PF01351.18	gi|297620990|ref|YP_003709127.1|	-	1.5e-30	106.5	0.3	1.9e-30	106.2	0.3	1.1	1	0	0	1	1	1	1	Ribonuclease	HII
DUF3378	PF11858.8	gi|297620990|ref|YP_003709127.1|	-	5.1e-14	52.1	0.0	9.8e-14	51.2	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3378)
HTH_25	PF13413.6	gi|297620991|ref|YP_003709128.1|	-	5.5e-23	80.6	0.3	8.3e-23	80.0	0.3	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.7	gi|297620991|ref|YP_003709128.1|	-	9e-09	35.2	0.4	1.2e-08	34.8	0.4	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_3	PF01381.22	gi|297620991|ref|YP_003709128.1|	-	7.8e-05	22.7	0.3	0.00013	21.9	0.3	1.5	1	1	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.6	gi|297620991|ref|YP_003709128.1|	-	0.0068	16.7	0.0	0.011	16.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF896	PF05979.12	gi|297620991|ref|YP_003709128.1|	-	0.012	15.5	0.6	0.017	15.0	0.6	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF896)
TM_helix	PF05552.12	gi|297620991|ref|YP_003709128.1|	-	1.6	8.8	5.5	4.5	7.3	5.5	1.7	1	1	0	1	1	1	0	Conserved	TM	helix
DUF368	PF04018.13	gi|297620992|ref|YP_003709129.1|	-	2.5e-69	233.6	8.6	2.5e-69	233.6	8.6	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF368)
PseudoU_synth_1	PF01416.20	gi|297620993|ref|YP_003709130.1|	-	5.2e-30	104.1	0.0	5.6e-23	81.5	0.0	2.1	2	0	0	2	2	2	2	tRNA	pseudouridine	synthase
DUF2344	PF10105.9	gi|297620993|ref|YP_003709130.1|	-	0.12	12.2	0.0	0.16	11.8	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2344)
MarC	PF01914.17	gi|297620994|ref|YP_003709131.1|	-	2.9e-44	150.9	16.5	3.3e-44	150.7	16.5	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
DUF2070	PF09843.9	gi|297620994|ref|YP_003709131.1|	-	0.17	10.2	9.7	0.21	9.9	9.7	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
Wzy_C	PF04932.15	gi|297620994|ref|YP_003709131.1|	-	1.7	8.2	9.1	2.7	7.6	1.4	2.4	2	1	0	2	2	2	0	O-Antigen	ligase
MarC	PF01914.17	gi|297620995|ref|YP_003709132.1|	-	5.4e-41	140.2	18.1	6.1e-41	140.0	18.1	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
Colicin_V	PF02674.16	gi|297620995|ref|YP_003709132.1|	-	0.012	15.6	3.4	0.012	15.6	3.4	2.2	2	0	0	2	2	2	0	Colicin	V	production	protein
TerC	PF03741.16	gi|297620995|ref|YP_003709132.1|	-	0.013	15.2	11.8	1.3	8.6	11.8	2.2	1	1	0	1	1	1	0	Integral	membrane	protein	TerC	family
DUF4131	PF13567.6	gi|297620995|ref|YP_003709132.1|	-	0.15	11.7	7.7	0.36	10.5	1.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
ABC_trans_CmpB	PF06541.11	gi|297620995|ref|YP_003709132.1|	-	0.31	11.3	6.4	0.79	10.0	0.3	2.3	2	0	0	2	2	2	0	Putative	ABC-transporter	type	IV
DMT_YdcZ	PF04657.13	gi|297620995|ref|YP_003709132.1|	-	0.37	11.1	12.3	1.2	9.4	6.2	2.2	2	0	0	2	2	2	0	Putative	inner	membrane	exporter,	YdcZ
EI24	PF07264.11	gi|297620996|ref|YP_003709133.1|	-	0.016	15.5	0.7	0.019	15.2	0.7	1.1	1	0	0	1	1	1	0	Etoposide-induced	protein	2.4	(EI24)
DUF4231	PF14015.6	gi|297620996|ref|YP_003709133.1|	-	0.028	14.9	0.8	0.082	13.4	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
ETRAMP	PF09716.10	gi|297620996|ref|YP_003709133.1|	-	0.057	13.5	1.7	0.13	12.3	1.6	1.7	1	1	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
PhoD	PF09423.10	gi|297620997|ref|YP_003709134.1|	-	4.7e-09	35.7	0.0	1.5e-07	30.8	0.0	2.1	2	0	0	2	2	2	2	PhoD-like	phosphatase
Helicase_PWI	PF18149.1	gi|297620997|ref|YP_003709134.1|	-	0.014	15.5	0.6	0.56	10.4	0.0	2.6	2	1	0	2	2	2	0	N-terminal	helicase	PWI	domain
Glucokinase	PF02685.16	gi|297620998|ref|YP_003709135.1|	-	2.6e-75	253.4	0.0	3e-75	253.2	0.0	1.0	1	0	0	1	1	1	1	Glucokinase
ROK	PF00480.20	gi|297620998|ref|YP_003709135.1|	-	0.0013	18.2	0.0	0.0081	15.7	0.0	1.9	1	1	0	1	1	1	1	ROK	family
Diphthami_syn_2	PF01902.17	gi|297620999|ref|YP_003709136.1|	-	1.5e-40	139.0	0.0	2e-40	138.7	0.0	1.0	1	0	0	1	1	1	1	Diphthamide	synthase
Aminotran_1_2	PF00155.21	gi|297621000|ref|YP_003709137.1|	-	7e-41	140.6	0.0	2.2e-40	138.9	0.0	1.7	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Alliinase_C	PF04864.13	gi|297621000|ref|YP_003709137.1|	-	2.2e-06	26.8	0.0	0.00022	20.2	0.0	2.2	2	0	0	2	2	2	2	Allinase
DHDPS	PF00701.22	gi|297621001|ref|YP_003709138.1|	-	3.7e-96	321.2	0.0	4.1e-96	321.1	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
DapB_C	PF05173.14	gi|297621002|ref|YP_003709139.1|	-	2.2e-36	124.6	0.0	3.8e-36	123.8	0.0	1.4	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	C-terminus
DapB_N	PF01113.20	gi|297621002|ref|YP_003709139.1|	-	1.9e-18	66.8	0.4	8.4e-18	64.7	0.4	2.0	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
PglD_N	PF17836.1	gi|297621002|ref|YP_003709139.1|	-	0.00016	22.3	0.2	0.00051	20.6	0.1	1.9	2	0	0	2	2	2	1	PglD	N-terminal	domain
Gp_dh_N	PF00044.24	gi|297621002|ref|YP_003709139.1|	-	0.0011	19.2	0.1	0.0022	18.3	0.1	1.6	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|297621002|ref|YP_003709139.1|	-	0.0022	18.5	0.1	0.0043	17.6	0.1	1.6	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.22	gi|297621002|ref|YP_003709139.1|	-	0.0051	17.6	0.0	0.0082	17.0	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_2	PF03446.15	gi|297621002|ref|YP_003709139.1|	-	0.037	14.2	0.1	0.13	12.4	0.1	2.0	1	1	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.18	gi|297621002|ref|YP_003709139.1|	-	0.046	13.6	0.1	0.077	12.9	0.1	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|297621002|ref|YP_003709139.1|	-	0.078	13.2	0.1	0.15	12.3	0.1	1.5	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Beta-lactamase	PF00144.24	gi|297621004|ref|YP_003709141.1|	-	1.4e-50	172.4	0.1	1.8e-50	172.1	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase
DUF3471	PF11954.8	gi|297621004|ref|YP_003709141.1|	-	3.5e-13	49.9	0.1	8.5e-13	48.7	0.1	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3471)
DUF423	PF04241.15	gi|297621005|ref|YP_003709142.1|	-	2.9e-30	104.3	5.6	5e-30	103.5	5.6	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF423)
LAT	PF15234.6	gi|297621006|ref|YP_003709143.1|	-	0.14	11.9	0.1	0.2	11.4	0.1	1.1	1	0	0	1	1	1	0	Linker	for	activation	of	T-cells
PLDc_2	PF13091.6	gi|297621007|ref|YP_003709144.1|	-	8.5e-49	164.8	2.8	8.9e-27	93.6	0.1	2.3	2	0	0	2	2	2	2	PLD-like	domain
FAM83	PF07894.12	gi|297621007|ref|YP_003709144.1|	-	2e-12	47.2	0.3	0.0019	17.8	0.0	4.0	3	1	1	4	4	4	4	FAM83	A-H
PLDc	PF00614.22	gi|297621007|ref|YP_003709144.1|	-	6.8e-10	38.7	0.1	0.00017	21.6	0.0	2.5	2	0	0	2	2	2	2	Phospholipase	D	Active	site	motif
PP_kinase_C	PF13090.6	gi|297621007|ref|YP_003709144.1|	-	2.9e-08	33.4	1.2	1.5e-07	31.1	0.1	2.1	2	0	0	2	2	2	1	Polyphosphate	kinase	C-terminal	domain	2
Regulator_TrmB	PF11495.8	gi|297621007|ref|YP_003709144.1|	-	3.5e-08	32.9	0.0	0.00028	20.1	0.0	2.1	2	0	0	2	2	2	2	Archaeal	transcriptional	regulator	TrmB
7TM_GPCR_Srsx	PF10320.9	gi|297621007|ref|YP_003709144.1|	-	0.068	12.5	0.1	0.83	9.0	0.0	2.2	2	0	0	2	2	2	0	Serpentine	type	7TM	GPCR	chemoreceptor	Srsx
PrpR_N	PF06506.11	gi|297621007|ref|YP_003709144.1|	-	0.084	12.4	0.1	0.58	9.7	0.0	2.1	2	0	0	2	2	2	0	Propionate	catabolism	activator
Titin_Ig-rpts	PF06582.12	gi|297621007|ref|YP_003709144.1|	-	0.2	11.6	0.1	0.38	10.7	0.1	1.4	1	0	0	1	1	1	0	Titin	repeat
AAA_30	PF13604.6	gi|297621008|ref|YP_003709145.1|	-	3.3e-41	141.1	0.0	6e-41	140.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
HHH_4	PF14490.6	gi|297621008|ref|YP_003709145.1|	-	3.3e-36	123.1	0.0	2.2e-31	107.7	0.0	2.6	2	0	0	2	2	2	2	Helix-hairpin-helix	containing	domain
AAA_19	PF13245.6	gi|297621008|ref|YP_003709145.1|	-	7.8e-36	123.6	0.0	1.8e-35	122.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
SH3_13	PF18335.1	gi|297621008|ref|YP_003709145.1|	-	6.1e-21	74.0	1.4	1.6e-20	72.7	1.4	1.8	1	0	0	1	1	1	1	ATP-dependent	RecD-like	DNA	helicase	SH3	domain
UvrD_C_2	PF13538.6	gi|297621008|ref|YP_003709145.1|	-	4.4e-15	55.2	0.0	9e-15	54.2	0.0	1.6	1	0	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
HHH_5	PF14520.6	gi|297621008|ref|YP_003709145.1|	-	9.5e-14	51.7	0.1	3e-09	37.3	0.0	3.3	3	0	0	3	3	3	2	Helix-hairpin-helix	domain
AAA_11	PF13086.6	gi|297621008|ref|YP_003709145.1|	-	7.5e-09	35.8	0.3	0.0012	18.6	0.2	2.4	2	0	0	2	2	2	2	AAA	domain
Helicase_RecD	PF05127.14	gi|297621008|ref|YP_003709145.1|	-	1.6e-07	31.3	0.9	2.3e-06	27.6	0.9	2.4	1	1	0	1	1	1	1	Helicase
Viral_helicase1	PF01443.18	gi|297621008|ref|YP_003709145.1|	-	9.3e-06	25.5	0.0	0.0022	17.8	0.0	2.4	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
HHH	PF00633.23	gi|297621008|ref|YP_003709145.1|	-	7.5e-05	22.4	1.2	4	7.5	0.0	4.2	4	0	0	4	4	4	1	Helix-hairpin-helix	motif
T2SSE	PF00437.20	gi|297621008|ref|YP_003709145.1|	-	0.00011	21.4	0.1	0.00025	20.2	0.1	1.6	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
PhoH	PF02562.16	gi|297621008|ref|YP_003709145.1|	-	0.00017	21.1	0.8	0.33	10.4	0.2	2.4	2	0	0	2	2	2	2	PhoH-like	protein
PIF1	PF05970.14	gi|297621008|ref|YP_003709145.1|	-	0.0012	18.1	0.1	0.0032	16.7	0.1	1.8	1	0	0	1	1	1	1	PIF1-like	helicase
AAA_29	PF13555.6	gi|297621008|ref|YP_003709145.1|	-	0.013	15.3	0.3	0.026	14.2	0.3	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
HHH_3	PF12836.7	gi|297621008|ref|YP_003709145.1|	-	0.013	15.8	0.1	13	6.1	0.0	3.7	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
HHH_2	PF12826.7	gi|297621008|ref|YP_003709145.1|	-	0.013	15.6	0.0	1.9	8.7	0.0	3.2	1	1	1	2	2	2	0	Helix-hairpin-helix	motif
ABC_tran	PF00005.27	gi|297621008|ref|YP_003709145.1|	-	0.014	15.9	0.1	0.041	14.4	0.1	1.8	1	0	0	1	1	1	0	ABC	transporter
DUF2075	PF09848.9	gi|297621008|ref|YP_003709145.1|	-	0.018	14.3	0.1	0.058	12.6	0.1	1.8	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_28	PF13521.6	gi|297621008|ref|YP_003709145.1|	-	0.044	14.0	0.4	0.094	13.0	0.4	1.6	1	0	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|297621008|ref|YP_003709145.1|	-	0.045	13.7	0.1	0.11	12.4	0.1	1.6	1	0	0	1	1	1	0	RsgA	GTPase
Ribosomal_S13	PF00416.22	gi|297621008|ref|YP_003709145.1|	-	0.049	14.0	1.1	2.2	8.7	0.1	3.0	2	1	1	3	3	2	0	Ribosomal	protein	S13/S18
NTPase_1	PF03266.15	gi|297621008|ref|YP_003709145.1|	-	0.053	13.4	1.7	1.1	9.2	0.4	2.9	3	0	0	3	3	2	0	NTPase
MMR_HSR1	PF01926.23	gi|297621008|ref|YP_003709145.1|	-	0.06	13.4	0.0	0.62	10.2	0.0	2.4	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
DNA_pol_lambd_f	PF10391.9	gi|297621008|ref|YP_003709145.1|	-	0.062	13.1	0.0	6.9	6.6	0.0	3.0	2	0	0	2	2	2	0	Fingers	domain	of	DNA	polymerase	lambda
AAA_18	PF13238.6	gi|297621008|ref|YP_003709145.1|	-	0.069	13.7	0.3	0.49	10.9	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_10	PF12846.7	gi|297621008|ref|YP_003709145.1|	-	0.12	11.3	0.0	0.29	10.0	0.0	1.6	1	0	0	1	1	1	0	AAA-like	domain
AAA	PF00004.29	gi|297621008|ref|YP_003709145.1|	-	0.12	12.8	0.2	0.46	10.9	0.2	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IMS_HHH	PF11798.8	gi|297621008|ref|YP_003709145.1|	-	0.12	12.7	0.9	5	7.6	0.1	3.3	3	0	0	3	3	2	0	IMS	family	HHH	motif
HHH_8	PF14716.6	gi|297621008|ref|YP_003709145.1|	-	0.16	12.3	0.3	5.8	7.4	0.1	3.1	3	0	0	3	3	3	0	Helix-hairpin-helix	domain
AAA_23	PF13476.6	gi|297621008|ref|YP_003709145.1|	-	0.48	10.9	3.4	1.4	9.4	3.3	2.1	1	1	0	1	1	1	0	AAA	domain
UvrD-helicase	PF00580.21	gi|297621008|ref|YP_003709145.1|	-	2.2	7.7	7.6	2.6	7.5	1.4	2.6	2	1	0	3	3	3	0	UvrD/REP	helicase	N-terminal	domain
HEAT_2	PF13646.6	gi|297621009|ref|YP_003709146.1|	-	1.8e-17	63.5	0.9	2.1e-05	24.8	0.3	4.5	1	1	2	4	4	4	4	HEAT	repeats
HEAT_PBS	PF03130.16	gi|297621009|ref|YP_003709146.1|	-	4.8e-05	23.6	3.3	0.025	15.2	0.0	5.0	5	2	1	6	6	6	1	PBS	lyase	HEAT-like	repeat
EF-hand_14	PF17959.1	gi|297621009|ref|YP_003709146.1|	-	0.0086	16.4	0.3	0.45	10.9	0.0	3.1	3	0	0	3	3	3	1	EF-hand	domain
ERAP1_C	PF11838.8	gi|297621009|ref|YP_003709146.1|	-	0.065	12.8	0.5	2.2	7.7	0.6	2.6	1	1	1	2	2	2	0	ERAP1-like	C-terminal	domain
zf-CHC2	PF01807.20	gi|297621010|ref|YP_003709147.1|	-	2.3e-35	120.3	0.1	5.7e-35	119.1	0.1	1.7	1	0	0	1	1	1	1	CHC2	zinc	finger
Toprim_N	PF08275.11	gi|297621010|ref|YP_003709147.1|	-	1.1e-32	112.8	0.0	2.4e-32	111.7	0.0	1.5	1	0	0	1	1	1	1	DNA	primase	catalytic	core,	N-terminal	domain
Toprim_2	PF13155.6	gi|297621010|ref|YP_003709147.1|	-	1.7e-13	50.7	0.0	2.1e-12	47.3	0.0	2.6	3	1	0	3	3	3	1	Toprim-like
Toprim_3	PF13362.6	gi|297621010|ref|YP_003709147.1|	-	1.4e-09	38.1	0.0	3.1e-09	37.1	0.0	1.6	1	0	0	1	1	1	1	Toprim	domain
Toprim_4	PF13662.6	gi|297621010|ref|YP_003709147.1|	-	2.2e-09	37.7	0.2	5e-09	36.5	0.2	1.6	1	0	0	1	1	1	1	Toprim	domain
DnaB_bind	PF10410.9	gi|297621010|ref|YP_003709147.1|	-	1.3e-07	31.7	0.0	3.6e-07	30.3	0.0	1.9	1	0	0	1	1	1	1	DnaB-helicase	binding	domain	of	primase
Toprim	PF01751.22	gi|297621010|ref|YP_003709147.1|	-	3.9e-05	23.8	0.1	0.0001	22.5	0.1	1.7	1	0	0	1	1	1	1	Toprim	domain
DUF393	PF04134.12	gi|297621011|ref|YP_003709148.1|	-	1.1e-23	84.7	0.0	1.3e-23	84.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF393
Baculo_PEP_C	PF04513.12	gi|297621012|ref|YP_003709149.1|	-	4.3e-05	23.6	3.2	0.043	13.9	0.1	3.4	3	1	1	4	4	4	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
FlaC_arch	PF05377.11	gi|297621012|ref|YP_003709149.1|	-	0.0051	17.2	3.1	0.2	12.1	0.2	3.3	3	1	0	3	3	3	1	Flagella	accessory	protein	C	(FlaC)
Apolipoprotein	PF01442.18	gi|297621012|ref|YP_003709149.1|	-	0.0051	16.7	3.4	0.016	15.1	0.2	2.5	2	1	0	2	2	2	1	Apolipoprotein	A1/A4/E	domain
Complex1_49kDa	PF00346.19	gi|297621012|ref|YP_003709149.1|	-	0.081	12.0	2.9	1.3	8.1	0.3	3.3	1	1	2	3	3	3	0	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
YlqD	PF11068.8	gi|297621012|ref|YP_003709149.1|	-	0.13	12.7	12.3	8.5	6.8	5.1	2.7	1	1	1	2	2	2	0	YlqD	protein
Tropomyosin_1	PF12718.7	gi|297621012|ref|YP_003709149.1|	-	0.22	11.7	9.9	0.056	13.6	1.6	2.9	1	1	2	3	3	3	0	Tropomyosin	like
GAGBD	PF16828.5	gi|297621012|ref|YP_003709149.1|	-	0.24	11.5	8.8	0.48	10.5	4.4	2.4	2	0	0	2	2	2	0	GAG-binding	domain	on	surface	antigen
THOC7	PF05615.13	gi|297621012|ref|YP_003709149.1|	-	0.27	11.5	14.9	0.47	10.7	1.4	3.1	1	1	1	2	2	2	0	Tho	complex	subunit	7
Syntaxin-6_N	PF09177.11	gi|297621012|ref|YP_003709149.1|	-	0.31	11.6	4.2	4	8.1	0.8	2.9	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
Fungal_TACC	PF12709.7	gi|297621012|ref|YP_003709149.1|	-	0.32	11.5	10.1	0.9	10.0	0.6	3.4	2	1	1	3	3	3	0	Fungal	Transforming	acidic	coiled-coil	(TACC)	proteins
YkyA	PF10368.9	gi|297621012|ref|YP_003709149.1|	-	0.49	10.1	11.0	2.5	7.8	11.0	2.3	1	1	0	1	1	1	0	Putative	cell-wall	binding	lipoprotein
DUF4407	PF14362.6	gi|297621012|ref|YP_003709149.1|	-	1.1	8.6	10.8	1	8.7	8.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
DUF1796	PF08795.10	gi|297621012|ref|YP_003709149.1|	-	1.1	9.2	5.5	0.47	10.4	2.8	1.6	2	0	0	2	2	2	0	Putative	papain-like	cysteine	peptidase	(DUF1796)
CENP-K	PF11802.8	gi|297621012|ref|YP_003709149.1|	-	1.6	8.2	15.0	0.89	9.1	7.5	2.2	1	1	0	2	2	2	0	Centromere-associated	protein	K
Fzo_mitofusin	PF04799.13	gi|297621012|ref|YP_003709149.1|	-	2	7.9	9.4	3.2	7.3	0.3	3.1	1	1	2	3	3	3	0	fzo-like	conserved	region
Fib_alpha	PF08702.10	gi|297621012|ref|YP_003709149.1|	-	2.1	8.6	14.2	5.6	7.1	7.2	3.1	1	1	2	3	3	3	0	Fibrinogen	alpha/beta	chain	family
Med11	PF10280.9	gi|297621012|ref|YP_003709149.1|	-	2.2	8.7	8.3	1.8	9.0	5.4	2.3	2	2	0	2	2	2	0	Mediator	complex	protein
PHM7_cyt	PF14703.6	gi|297621012|ref|YP_003709149.1|	-	3	8.0	14.7	0.065	13.5	4.6	2.7	2	1	1	3	3	3	0	Cytosolic	domain	of	10TM	putative	phosphate	transporter
FliJ	PF02050.16	gi|297621012|ref|YP_003709149.1|	-	3.2	8.0	15.1	1.6	8.9	7.3	3.1	2	1	2	4	4	4	0	Flagellar	FliJ	protein
Cob_adeno_trans	PF01923.18	gi|297621012|ref|YP_003709149.1|	-	3.6	7.7	5.7	11	6.2	1.7	2.4	1	1	1	2	2	2	0	Cobalamin	adenosyltransferase
DUF2203	PF09969.9	gi|297621012|ref|YP_003709149.1|	-	4.4	8.0	6.7	6.6	7.5	2.2	2.8	1	1	2	3	3	3	0	Uncharacterized	conserved	protein	(DUF2203)
Prefoldin_2	PF01920.20	gi|297621012|ref|YP_003709149.1|	-	5.4	7.0	13.7	7.2	6.6	2.3	3.3	2	1	0	3	3	3	0	Prefoldin	subunit
FlxA	PF14282.6	gi|297621012|ref|YP_003709149.1|	-	5.5	7.0	15.5	18	5.4	0.6	2.8	2	1	0	2	2	2	0	FlxA-like	protein
Cnn_1N	PF07989.11	gi|297621012|ref|YP_003709149.1|	-	7.1	6.9	11.7	5	7.3	5.6	3.3	2	1	0	2	2	2	0	Centrosomin	N-terminal	motif	1
OMP_b-brl	PF13505.6	gi|297621014|ref|YP_003709151.1|	-	0.00021	21.5	0.7	0.00031	20.9	0.7	1.3	1	0	0	1	1	1	1	Outer	membrane	protein	beta-barrel	domain
Autotransporter	PF03797.19	gi|297621014|ref|YP_003709151.1|	-	0.018	14.7	1.5	0.031	13.9	1.5	1.5	1	0	0	1	1	1	0	Autotransporter	beta-domain
ATP-grasp_3	PF02655.14	gi|297621016|ref|YP_003709153.1|	-	1.1e-08	35.3	0.0	3.4e-08	33.7	0.0	1.8	1	1	0	1	1	1	1	ATP-grasp	domain
Glyco_transf_4	PF13439.6	gi|297621016|ref|YP_003709153.1|	-	0.00048	20.2	0.1	0.0013	18.8	0.1	1.7	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
adh_short	PF00106.25	gi|297621016|ref|YP_003709153.1|	-	0.039	13.4	0.0	0.059	12.8	0.0	1.2	1	0	0	1	1	1	0	short	chain	dehydrogenase
ATPgrasp_Ter	PF15632.6	gi|297621016|ref|YP_003709153.1|	-	0.065	13.0	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
TTL	PF03133.15	gi|297621016|ref|YP_003709153.1|	-	0.1	11.7	0.0	0.16	11.1	0.0	1.2	1	0	0	1	1	1	0	Tubulin-tyrosine	ligase	family
RmlD_sub_bind	PF04321.17	gi|297621016|ref|YP_003709153.1|	-	0.13	11.3	0.0	0.6	9.2	0.0	1.8	2	0	0	2	2	2	0	RmlD	substrate	binding	domain
Methyltrans_RNA	PF04452.14	gi|297621017|ref|YP_003709154.1|	-	7.8e-51	172.6	0.0	9.4e-51	172.3	0.0	1.1	1	0	0	1	1	1	1	RNA	methyltransferase
YbbR	PF07949.12	gi|297621018|ref|YP_003709155.1|	-	4e-05	23.9	0.2	0.43	10.9	0.5	2.7	2	0	0	2	2	2	2	YbbR-like	protein
DisA_N	PF02457.16	gi|297621019|ref|YP_003709156.1|	-	8.7e-39	131.8	0.7	1.5e-38	131.0	0.4	1.5	2	0	0	2	2	2	1	DisA	bacterial	checkpoint	controller	nucleotide-binding
Pterin_bind	PF00809.22	gi|297621020|ref|YP_003709157.1|	-	7.2e-86	287.8	0.0	8.4e-86	287.6	0.0	1.0	1	0	0	1	1	1	1	Pterin	binding	enzyme
PEP_mutase	PF13714.6	gi|297621020|ref|YP_003709157.1|	-	0.081	12.4	0.3	2.5	7.5	0.1	2.5	1	1	1	2	2	2	0	Phosphoenolpyruvate	phosphomutase
Cyt_bd_oxida_I	PF01654.17	gi|297621021|ref|YP_003709158.1|	-	7.8e-162	538.6	30.3	8.9e-162	538.5	30.3	1.0	1	0	0	1	1	1	1	Cytochrome	bd	terminal	oxidase	subunit	I
Cyt_bd_oxida_II	PF02322.15	gi|297621022|ref|YP_003709159.1|	-	3.9e-100	335.1	27.1	4.4e-100	335.0	27.1	1.0	1	0	0	1	1	1	1	Cytochrome	bd	terminal	oxidase	subunit	II
Phage_holin_5_2	PF16079.5	gi|297621022|ref|YP_003709159.1|	-	7	7.1	10.0	5.2	7.5	0.3	3.5	2	1	1	3	3	3	0	Phage	holin	family	Hol44,	in	holin	superfamily	V
HTH_38	PF13936.6	gi|297621023|ref|YP_003709160.1|	-	1.6e-12	47.0	0.7	1.6e-12	47.0	0.7	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.26	gi|297621023|ref|YP_003709160.1|	-	2.7e-12	46.9	0.0	7.9e-11	42.2	0.0	2.3	2	0	0	2	2	2	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297621023|ref|YP_003709160.1|	-	3e-05	24.5	2.7	0.0099	16.5	0.0	3.5	2	1	2	4	4	4	1	Homeodomain-like	domain
HTH_23	PF13384.6	gi|297621023|ref|YP_003709160.1|	-	0.0004	20.1	0.6	0.0095	15.7	0.1	3.1	3	0	0	3	3	3	1	Homeodomain-like	domain
HTH_29	PF13551.6	gi|297621023|ref|YP_003709160.1|	-	0.0059	16.6	3.6	0.35	10.9	0.0	3.3	3	0	0	3	3	3	1	Winged	helix-turn	helix
Terminase_5	PF06056.12	gi|297621023|ref|YP_003709160.1|	-	0.031	14.2	0.0	2.6	8.0	0.0	2.6	2	0	0	2	2	2	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_28	PF13518.6	gi|297621023|ref|YP_003709160.1|	-	1.3	9.2	6.1	54	4.0	0.1	3.7	4	0	0	4	4	4	0	Helix-turn-helix	domain
GBP_C	PF02841.14	gi|297621024|ref|YP_003709161.1|	-	0.022	14.2	7.9	0.049	13.0	7.9	1.5	1	0	0	1	1	1	0	Guanylate-binding	protein,	C-terminal	domain
ABC_tran_CTD	PF16326.5	gi|297621024|ref|YP_003709161.1|	-	0.027	14.7	8.6	1.2	9.5	7.9	3.3	1	1	1	2	2	2	0	ABC	transporter	C-terminal	domain
Katanin_con80	PF13925.6	gi|297621024|ref|YP_003709161.1|	-	0.068	13.2	4.6	0.098	12.7	0.1	3.4	3	0	0	3	3	3	0	con80	domain	of	Katanin
T3SS_needle_E	PF08988.10	gi|297621024|ref|YP_003709161.1|	-	0.22	11.7	1.8	2.9	8.1	0.3	3.0	2	0	0	2	2	2	0	Type	III	secretion	system,	cytoplasmic	E	component	of	needle
DUF4363	PF14276.6	gi|297621024|ref|YP_003709161.1|	-	0.26	11.4	4.3	1.7	8.8	4.3	2.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4363)
Cytochrom_C_2	PF01322.20	gi|297621024|ref|YP_003709161.1|	-	1.4	9.9	3.0	29	5.6	0.0	4.1	5	0	0	5	5	5	0	Cytochrome	C'
Rota_NSP3	PF01665.16	gi|297621024|ref|YP_003709161.1|	-	4.9	6.2	8.1	1.7	7.7	4.8	1.9	2	0	0	2	2	2	0	Rotavirus	non-structural	protein	NSP3
BPL_LplA_LipB	PF03099.19	gi|297621025|ref|YP_003709162.1|	-	1.7e-14	53.9	0.0	2.3e-14	53.4	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Radical_SAM	PF04055.21	gi|297621026|ref|YP_003709163.1|	-	1.2e-13	51.7	0.0	2e-13	51.0	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|297621026|ref|YP_003709163.1|	-	0.016	15.3	0.0	0.029	14.5	0.0	1.3	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Mur_ligase_M	PF08245.12	gi|297621027|ref|YP_003709164.1|	-	4e-13	49.8	0.1	9.2e-13	48.6	0.1	1.7	1	0	0	1	1	1	1	Mur	ligase	middle	domain
PrpR_N	PF06506.11	gi|297621027|ref|YP_003709164.1|	-	0.019	14.6	0.0	0.054	13.1	0.0	1.7	1	0	0	1	1	1	0	Propionate	catabolism	activator
Pyrid_oxidase_2	PF13883.6	gi|297621027|ref|YP_003709164.1|	-	0.12	12.3	0.0	0.56	10.2	0.0	1.9	2	0	0	2	2	2	0	Pyridoxamine	5'-phosphate	oxidase
COX17	PF05051.13	gi|297621027|ref|YP_003709164.1|	-	6.6	7.2	5.8	0.63	10.4	0.8	1.8	2	0	0	2	2	2	0	Cytochrome	C	oxidase	copper	chaperone	(COX17)
PHP	PF02811.19	gi|297621028|ref|YP_003709165.1|	-	6.2e-11	42.9	0.1	8.2e-11	42.5	0.1	1.2	1	0	0	1	1	1	1	PHP	domain
MurB_C	PF02873.16	gi|297621029|ref|YP_003709166.1|	-	4.1e-27	94.6	0.0	9e-27	93.5	0.0	1.5	1	0	0	1	1	1	1	UDP-N-acetylenolpyruvoylglucosamine	reductase,	C-terminal	domain
FAD_binding_4	PF01565.23	gi|297621029|ref|YP_003709166.1|	-	3e-23	82.1	0.0	5e-23	81.4	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
NusB	PF01029.18	gi|297621030|ref|YP_003709167.1|	-	1.8e-25	89.7	0.0	2.2e-25	89.5	0.0	1.1	1	0	0	1	1	1	1	NusB	family
RNase_T	PF00929.24	gi|297621033|ref|YP_003709170.1|	-	2.3e-08	34.8	0.1	4.8e-08	33.7	0.1	1.6	1	1	0	1	1	1	1	Exonuclease
RNase_H_2	PF13482.6	gi|297621033|ref|YP_003709170.1|	-	0.075	13.0	1.3	1.6	8.7	0.2	2.2	1	1	0	2	2	2	0	RNase_H	superfamily
DUF3782	PF12644.7	gi|297621033|ref|YP_003709170.1|	-	0.12	12.5	0.0	0.3	11.3	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
CENP-B_N	PF04218.13	gi|297621033|ref|YP_003709170.1|	-	0.35	10.5	0.1	0.35	10.5	0.1	1.7	2	0	0	2	2	2	0	CENP-B	N-terminal	DNA-binding	domain
rRNA_methylase	PF06962.12	gi|297621034|ref|YP_003709171.1|	-	1.4e-42	144.9	0.0	1.8e-42	144.6	0.0	1.1	1	0	0	1	1	1	1	Putative	rRNA	methylase
Methyltransf_31	PF13847.6	gi|297621034|ref|YP_003709171.1|	-	4.9e-06	26.4	0.1	7.3e-06	25.8	0.1	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297621034|ref|YP_003709171.1|	-	7e-05	23.5	0.0	0.00011	22.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_5	PF01795.19	gi|297621034|ref|YP_003709171.1|	-	0.0024	17.4	0.0	0.0097	15.4	0.0	1.7	2	0	0	2	2	2	1	MraW	methylase	family
Methyltransf_32	PF13679.6	gi|297621034|ref|YP_003709171.1|	-	0.005	16.8	0.0	0.008	16.2	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|297621034|ref|YP_003709171.1|	-	0.0055	16.1	0.0	0.0064	15.8	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.14	gi|297621034|ref|YP_003709171.1|	-	0.0082	15.7	0.1	0.013	15.1	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	small	domain
SAM_MT	PF04445.13	gi|297621034|ref|YP_003709171.1|	-	0.011	15.1	0.0	0.016	14.7	0.0	1.3	1	0	0	1	1	1	0	Putative	SAM-dependent	methyltransferase
PrmA	PF06325.13	gi|297621034|ref|YP_003709171.1|	-	0.018	14.5	0.0	0.028	13.8	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_33	PF10017.9	gi|297621034|ref|YP_003709171.1|	-	0.088	11.9	0.0	0.1	11.7	0.0	1.2	1	0	0	1	1	1	0	Histidine-specific	methyltransferase,	SAM-dependent
Methyltransf_24	PF13578.6	gi|297621034|ref|YP_003709171.1|	-	0.11	13.5	0.0	0.23	12.5	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
TehB	PF03848.14	gi|297621034|ref|YP_003709171.1|	-	0.15	11.4	0.0	0.23	10.9	0.0	1.3	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
Xan_ur_permease	PF00860.20	gi|297621035|ref|YP_003709172.1|	-	2.7e-44	151.5	34.8	3.2e-44	151.2	34.8	1.1	1	0	0	1	1	1	1	Permease	family
Claudin_2	PF13903.6	gi|297621036|ref|YP_003709173.1|	-	0.083	12.6	2.0	0.13	12.1	2.0	1.3	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
Asp23	PF03780.13	gi|297621037|ref|YP_003709174.1|	-	8.2e-17	61.6	0.9	1.1e-16	61.1	0.9	1.1	1	0	0	1	1	1	1	Asp23	family,	cell	envelope-related	function
GYF_2	PF14237.6	gi|297621038|ref|YP_003709175.1|	-	5e-16	58.2	0.1	8e-16	57.6	0.1	1.3	1	0	0	1	1	1	1	GYF	domain	2
DUF1772	PF08592.11	gi|297621038|ref|YP_003709175.1|	-	0.015	15.7	0.0	0.016	15.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1772)
Phage_holin_3_3	PF16083.5	gi|297621038|ref|YP_003709175.1|	-	0.11	12.7	3.1	0.16	12.1	3.1	1.3	1	0	0	1	1	1	0	LydA	holin	phage,	holin	superfamily	III
Ribosomal_S14	PF00253.21	gi|297621039|ref|YP_003709176.1|	-	4.7e-24	83.9	1.5	4.7e-24	83.9	1.5	1.8	2	0	0	2	2	2	1	Ribosomal	protein	S14p/S29e
DUF3896	PF13035.6	gi|297621039|ref|YP_003709176.1|	-	0.21	11.8	2.7	0.23	11.6	1.9	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3896)
Ribosomal_L36	PF00444.18	gi|297621040|ref|YP_003709177.1|	-	2.2e-12	46.9	2.6	3e-12	46.5	2.6	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L36
Ribosomal_L34	PF00468.17	gi|297621041|ref|YP_003709178.1|	-	1.8e-19	69.4	14.0	2e-19	69.3	14.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34
Ribonuclease_P	PF00825.18	gi|297621042|ref|YP_003709179.1|	-	5.6e-26	90.8	5.5	6.5e-26	90.6	5.5	1.0	1	0	0	1	1	1	1	Ribonuclease	P
ATG2_CAD	PF13329.6	gi|297621042|ref|YP_003709179.1|	-	0.16	11.7	0.0	0.19	11.5	0.0	1.1	1	0	0	1	1	1	0	Autophagy-related	protein	2	CAD	motif
Thioredoxin_7	PF13899.6	gi|297621043|ref|YP_003709180.1|	-	7.1e-15	55.0	0.0	1.6e-14	53.8	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin-like
Thioredox_DsbH	PF03190.15	gi|297621043|ref|YP_003709180.1|	-	8e-13	48.7	0.0	1.5e-12	47.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_2	PF13098.6	gi|297621043|ref|YP_003709180.1|	-	1.4e-12	48.1	0.0	4.4e-12	46.4	0.0	1.9	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.20	gi|297621043|ref|YP_003709180.1|	-	1.3e-06	28.4	0.3	1.1e-05	25.3	0.3	2.4	1	1	0	1	1	1	1	Thioredoxin
TraF	PF13728.6	gi|297621043|ref|YP_003709180.1|	-	5.8e-06	26.3	0.3	2.2e-05	24.4	0.0	2.0	2	1	0	2	2	2	1	F	plasmid	transfer	operon	protein
Thioredoxin_8	PF13905.6	gi|297621043|ref|YP_003709180.1|	-	6.1e-05	23.3	2.5	0.00067	19.9	0.2	3.2	3	1	0	3	3	3	1	Thioredoxin-like
Redoxin	PF08534.10	gi|297621043|ref|YP_003709180.1|	-	0.0024	17.6	0.0	0.0079	15.9	0.0	1.9	1	0	0	1	1	1	1	Redoxin
AhpC-TSA	PF00578.21	gi|297621043|ref|YP_003709180.1|	-	0.013	15.4	0.2	0.087	12.7	0.0	2.4	3	0	0	3	3	3	0	AhpC/TSA	family
HyaE	PF07449.11	gi|297621043|ref|YP_003709180.1|	-	0.014	15.4	0.0	0.73	9.8	0.0	2.6	2	0	0	2	2	2	0	Hydrogenase-1	expression	protein	HyaE
DTW	PF03942.15	gi|297621044|ref|YP_003709181.1|	-	4.1e-07	29.9	0.0	6.1e-07	29.3	0.0	1.3	1	1	0	1	1	1	1	DTW	domain
Ribo_biogen_C	PF04034.13	gi|297621044|ref|YP_003709181.1|	-	1.5e-06	27.9	0.1	9.1e-06	25.4	0.1	1.9	1	1	0	1	1	1	1	Ribosome	biogenesis	protein,	C-terminal
LRV_FeS	PF05484.11	gi|297621044|ref|YP_003709181.1|	-	0.16	12.0	0.1	0.33	11.0	0.1	1.5	1	0	0	1	1	1	0	LRV	protein	FeS4	cluster
Na_Ala_symp	PF01235.17	gi|297621045|ref|YP_003709182.1|	-	4.6e-76	256.7	26.1	6.4e-76	256.2	26.1	1.1	1	0	0	1	1	1	1	Sodium:alanine	symporter	family
PfkB	PF00294.24	gi|297621046|ref|YP_003709183.1|	-	2.4e-40	138.7	0.0	3e-40	138.4	0.0	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
CDP-OH_P_transf	PF01066.21	gi|297621047|ref|YP_003709184.1|	-	6.4e-14	52.5	1.0	6.4e-14	52.5	1.0	2.5	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
Arg_decarbox_C	PF17944.1	gi|297621048|ref|YP_003709185.1|	-	0.17	12.5	2.4	6.3	7.4	0.3	3.2	2	0	0	2	2	2	0	Arginine	decarboxylase	C-terminal	helical	extension
Pribosyltran_N	PF13793.6	gi|297621049|ref|YP_003709186.1|	-	2.6e-50	169.2	0.0	2.3e-47	159.7	0.0	2.2	2	0	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyl_synth	PF14572.6	gi|297621049|ref|YP_003709186.1|	-	9.4e-27	94.2	0.4	1.4e-24	87.2	0.1	2.5	2	1	1	3	3	3	2	Phosphoribosyl	synthetase-associated	domain
Pribosyltran	PF00156.27	gi|297621049|ref|YP_003709186.1|	-	3.1e-15	56.0	1.9	1.3e-14	54.0	0.9	2.3	3	0	0	3	3	3	1	Phosphoribosyl	transferase	domain
Ribosomal_TL5_C	PF14693.6	gi|297621050|ref|YP_003709187.1|	-	1.8e-22	79.5	0.1	3.9e-22	78.4	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	protein	TL5,	C-terminal	domain
Ribosomal_L25p	PF01386.19	gi|297621050|ref|YP_003709187.1|	-	1.8e-19	70.1	0.1	2.7e-19	69.5	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	L25p	family
Pept_tRNA_hydro	PF01195.19	gi|297621051|ref|YP_003709188.1|	-	2e-56	190.7	0.0	2.3e-56	190.4	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase
MMS22L_N	PF14910.6	gi|297621051|ref|YP_003709188.1|	-	0.048	12.1	0.0	0.057	11.8	0.0	1.1	1	0	0	1	1	1	0	S-phase	genomic	integrity	recombination	mediator,	N-terminal
Ribosomal_S6	PF01250.17	gi|297621052|ref|YP_003709189.1|	-	3.3e-23	81.8	0.2	4.1e-23	81.5	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S6
PepSY	PF03413.19	gi|297621052|ref|YP_003709189.1|	-	0.017	15.7	0.0	0.033	14.8	0.0	1.4	1	0	0	1	1	1	0	Peptidase	propeptide	and	YPEB	domain
Inhibitor_I71	PF12628.7	gi|297621052|ref|YP_003709189.1|	-	0.046	13.6	0.0	0.055	13.3	0.0	1.1	1	0	0	1	1	1	0	Falstatin,	cysteine	peptidase	inhibitor
Ribosomal_S18	PF01084.20	gi|297621053|ref|YP_003709190.1|	-	6.2e-29	100.0	0.3	9e-29	99.5	0.3	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S18
Med23	PF11573.8	gi|297621053|ref|YP_003709190.1|	-	0.15	9.7	0.0	0.17	9.5	0.0	1.0	1	0	0	1	1	1	0	Mediator	complex	subunit	23
Ribosomal_L9_C	PF03948.14	gi|297621054|ref|YP_003709191.1|	-	2e-19	69.9	2.2	2.9e-19	69.3	2.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L9,	C-terminal	domain
Ribosomal_L9_N	PF01281.19	gi|297621054|ref|YP_003709191.1|	-	1.8e-16	59.4	0.0	4.1e-16	58.3	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L9,	N-terminal	domain
Epimerase	PF01370.21	gi|297621055|ref|YP_003709192.1|	-	4.2e-38	131.2	0.0	5.6e-38	130.8	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|297621055|ref|YP_003709192.1|	-	4.4e-16	59.2	0.0	1.7e-15	57.2	0.0	1.8	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Polysacc_synt_2	PF02719.15	gi|297621055|ref|YP_003709192.1|	-	3.1e-06	26.5	0.0	0.013	14.7	0.0	2.5	2	1	0	2	2	2	2	Polysaccharide	biosynthesis	protein
3Beta_HSD	PF01073.19	gi|297621055|ref|YP_003709192.1|	-	6.6e-06	25.3	0.0	1e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|297621055|ref|YP_003709192.1|	-	8.2e-06	25.1	0.0	5e-05	22.5	0.0	2.2	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
KR	PF08659.10	gi|297621055|ref|YP_003709192.1|	-	0.0028	17.6	0.0	0.0063	16.4	0.0	1.6	1	0	0	1	1	1	1	KR	domain
adh_short	PF00106.25	gi|297621055|ref|YP_003709192.1|	-	0.022	14.2	0.0	0.035	13.6	0.0	1.3	1	0	0	1	1	1	0	short	chain	dehydrogenase
NmrA	PF05368.13	gi|297621055|ref|YP_003709192.1|	-	0.032	13.8	0.0	0.063	12.8	0.0	1.5	1	0	0	1	1	1	0	NmrA-like	family
NAD_binding_4	PF07993.12	gi|297621055|ref|YP_003709192.1|	-	0.039	13.1	0.0	3.5	6.7	0.0	2.2	2	0	0	2	2	2	0	Male	sterility	protein
PfkB	PF00294.24	gi|297621056|ref|YP_003709193.1|	-	6.4e-42	143.9	0.4	6.8e-41	140.5	0.4	1.9	1	1	1	2	2	2	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.12	gi|297621056|ref|YP_003709193.1|	-	1.5e-06	27.8	0.9	0.0003	20.2	0.1	2.3	1	1	1	2	2	2	2	Phosphomethylpyrimidine	kinase
Carb_kinase	PF01256.17	gi|297621056|ref|YP_003709193.1|	-	0.024	14.1	0.9	0.057	12.9	0.9	1.7	1	1	0	1	1	1	0	Carbohydrate	kinase
Sec34	PF04136.15	gi|297621057|ref|YP_003709194.1|	-	0.038	13.9	0.1	0.19	11.6	0.1	2.3	1	0	0	1	1	1	0	Sec34-like	family
ALMT	PF11744.8	gi|297621057|ref|YP_003709194.1|	-	0.25	10.1	1.7	0.52	9.1	1.7	1.5	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
HTH_Tnp_1	PF01527.20	gi|297621058|ref|YP_003709195.1|	-	9.5e-12	45.1	0.5	1.2e-11	44.7	0.5	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.6	gi|297621058|ref|YP_003709195.1|	-	8.9e-05	22.5	0.0	0.00014	21.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|297621058|ref|YP_003709195.1|	-	0.00023	20.9	0.0	0.00038	20.2	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
rve	PF00665.26	gi|297621059|ref|YP_003709196.1|	-	4.4e-21	75.3	0.0	6.4e-21	74.7	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297621059|ref|YP_003709196.1|	-	3.9e-15	55.7	0.8	8.4e-15	54.7	0.8	1.6	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.6	gi|297621059|ref|YP_003709196.1|	-	1.9e-12	46.8	0.2	3.7e-12	45.8	0.2	1.5	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297621059|ref|YP_003709196.1|	-	0.0011	19.5	0.4	0.0011	19.5	0.4	2.4	3	0	0	3	3	3	1	Homeodomain-like	domain
rve_2	PF13333.6	gi|297621059|ref|YP_003709196.1|	-	0.01	16.0	1.0	0.021	15.0	1.0	1.5	1	0	0	1	1	1	0	Integrase	core	domain
PsiA	PF06952.11	gi|297621059|ref|YP_003709196.1|	-	0.029	13.6	3.5	0.75	9.0	0.0	2.3	2	1	0	2	2	2	0	PsiA	protein
DUF3467	PF11950.8	gi|297621060|ref|YP_003709197.1|	-	0.14	12.3	0.0	10	6.4	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3467)
TMEM117	PF15113.6	gi|297621061|ref|YP_003709198.1|	-	0.092	11.7	0.1	0.12	11.2	0.1	1.2	1	0	0	1	1	1	0	TMEM117	protein	family
DUF601	PF04642.12	gi|297621062|ref|YP_003709199.1|	-	0.12	11.8	0.0	0.22	11.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF601
FAD-oxidase_C	PF02913.19	gi|297621063|ref|YP_003709200.1|	-	2.2e-43	148.7	0.0	3.7e-43	148.0	0.0	1.4	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.23	gi|297621063|ref|YP_003709200.1|	-	1.8e-37	128.2	0.2	3.8e-37	127.1	0.1	1.6	2	0	0	2	2	2	1	FAD	binding	domain
CCG	PF02754.16	gi|297621063|ref|YP_003709200.1|	-	1e-08	35.3	0.2	0.00069	19.8	0.0	2.7	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_8	PF13183.6	gi|297621063|ref|YP_003709200.1|	-	6e-08	33.0	3.5	1.3e-07	31.9	3.5	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|297621063|ref|YP_003709200.1|	-	1.2e-07	32.1	3.1	2.6e-07	31.1	3.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|297621063|ref|YP_003709200.1|	-	0.00089	19.3	1.0	0.024	14.7	0.1	2.5	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|297621063|ref|YP_003709200.1|	-	0.01	16.4	1.0	0.025	15.2	1.0	1.7	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|297621063|ref|YP_003709200.1|	-	4.5	8.0	7.9	0.34	11.5	2.6	1.9	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|297621063|ref|YP_003709200.1|	-	7.1	6.9	6.6	0.76	10.0	1.3	2.1	2	0	0	2	2	2	0	4Fe-4S	binding	domain
AstB	PF04996.12	gi|297621064|ref|YP_003709201.1|	-	3.1e-187	622.6	0.0	3.6e-187	622.4	0.0	1.0	1	0	0	1	1	1	1	Succinylarginine	dihydrolase
Aldedh	PF00171.22	gi|297621065|ref|YP_003709202.1|	-	2.7e-112	375.6	0.0	3.2e-112	375.4	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
DDE_3	PF13358.6	gi|297621066|ref|YP_003709203.1|	-	1.6e-30	105.8	0.0	2.6e-30	105.1	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.6	gi|297621066|ref|YP_003709203.1|	-	3.4e-17	61.8	0.1	1e-16	60.3	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|297621066|ref|YP_003709203.1|	-	1.8e-06	27.9	0.0	6.4e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|297621066|ref|YP_003709203.1|	-	9e-06	25.3	0.0	2.2e-05	24.1	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297621066|ref|YP_003709203.1|	-	1.3e-05	25.2	0.0	4.8e-05	23.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.26	gi|297621066|ref|YP_003709203.1|	-	3.5e-05	24.0	0.0	0.00038	20.6	0.0	2.2	2	0	0	2	2	2	1	Integrase	core	domain
DDE_Tnp_ISAZ013	PF07592.11	gi|297621066|ref|YP_003709203.1|	-	0.00011	21.4	0.3	0.21	10.5	0.1	2.2	2	0	0	2	2	2	2	Rhodopirellula	transposase	DDE	domain
Sigma70_r4_2	PF08281.12	gi|297621066|ref|YP_003709203.1|	-	0.00037	20.1	0.0	0.00077	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Terminase_5	PF06056.12	gi|297621066|ref|YP_003709203.1|	-	0.00062	19.6	0.0	0.0013	18.5	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_40	PF14493.6	gi|297621066|ref|YP_003709203.1|	-	0.0036	17.7	0.1	0.016	15.7	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|297621066|ref|YP_003709203.1|	-	0.0063	16.0	0.0	0.017	14.6	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
rve_3	PF13683.6	gi|297621066|ref|YP_003709203.1|	-	0.026	14.3	0.0	0.082	12.7	0.0	1.9	1	0	0	1	1	1	0	Integrase	core	domain
HTH_38	PF13936.6	gi|297621066|ref|YP_003709203.1|	-	0.038	13.8	1.6	0.43	10.4	0.0	2.7	3	0	0	3	3	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|297621066|ref|YP_003709203.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.7	gi|297621066|ref|YP_003709203.1|	-	0.13	12.3	0.0	0.28	11.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.19	gi|297621066|ref|YP_003709203.1|	-	0.16	11.5	0.0	0.65	9.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.6	gi|297621066|ref|YP_003709203.1|	-	0.86	9.9	3.6	5.9	7.2	0.1	3.1	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
AstA	PF04958.12	gi|297621067|ref|YP_003709204.1|	-	3.7e-114	380.8	0.0	4.2e-114	380.6	0.0	1.0	1	0	0	1	1	1	1	Arginine	N-succinyltransferase	beta	subunit
Aminotran_3	PF00202.21	gi|297621068|ref|YP_003709205.1|	-	1.6e-48	165.4	0.0	2.4e-48	164.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-III
SLT	PF01464.20	gi|297621068|ref|YP_003709205.1|	-	0.0039	16.8	0.0	0.0083	15.8	0.0	1.5	1	0	0	1	1	1	1	Transglycosylase	SLT	domain
ATP-synt_J	PF04911.12	gi|297621068|ref|YP_003709205.1|	-	0.15	11.7	0.0	0.35	10.5	0.0	1.6	1	0	0	1	1	1	0	ATP	synthase	j	chain
Peptidase_M20	PF01546.28	gi|297621069|ref|YP_003709206.1|	-	2.5e-18	66.5	0.0	3.5e-18	66.1	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|297621069|ref|YP_003709206.1|	-	5.3e-17	61.7	0.2	1.5e-16	60.2	0.3	1.7	2	0	0	2	2	2	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.17	gi|297621069|ref|YP_003709206.1|	-	0.076	12.7	0.0	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	Peptidase	family	M28
DUF4096	PF13340.6	gi|297621070|ref|YP_003709207.1|	-	5.1e-30	103.5	0.9	6.9e-30	103.1	0.9	1.2	1	0	0	1	1	1	1	Putative	transposase	of	IS4/5	family	(DUF4096)
KxDL	PF10241.9	gi|297621073|ref|YP_003709210.1|	-	0.0022	18.2	10.5	0.0024	18.1	5.6	2.6	1	1	1	2	2	2	1	Uncharacterized	conserved	protein
Wzy_C	PF04932.15	gi|297621073|ref|YP_003709210.1|	-	0.09	12.4	0.0	0.12	12.0	0.0	1.3	1	0	0	1	1	1	0	O-Antigen	ligase
DUF2681	PF10883.8	gi|297621073|ref|YP_003709210.1|	-	0.098	13.1	0.5	0.098	13.1	0.5	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2681)
NPV_P10	PF05531.12	gi|297621073|ref|YP_003709210.1|	-	0.46	11.0	2.0	24	5.5	0.0	2.7	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Laminin_II	PF06009.12	gi|297621073|ref|YP_003709210.1|	-	2.1	8.3	9.0	2.1	8.3	5.9	2.1	1	1	1	2	2	2	0	Laminin	Domain	II
DUF3450	PF11932.8	gi|297621073|ref|YP_003709210.1|	-	5.5	6.2	18.1	0.026	13.8	4.2	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
DUF2729	PF10870.8	gi|297621074|ref|YP_003709211.1|	-	0.1	12.5	0.2	0.19	11.6	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2729)
AAA_2	PF07724.14	gi|297621075|ref|YP_003709212.1|	-	4.4e-56	189.7	2.4	1.6e-54	184.6	0.0	2.9	3	0	0	3	3	2	1	AAA	domain	(Cdc48	subfamily)
AAA_lid_9	PF17871.1	gi|297621075|ref|YP_003709212.1|	-	2.8e-31	107.5	0.4	2.8e-31	107.5	0.4	3.3	1	1	1	2	2	1	1	AAA	lid	domain
ClpB_D2-small	PF10431.9	gi|297621075|ref|YP_003709212.1|	-	4.9e-26	90.6	1.3	2.3e-25	88.5	0.0	2.9	3	0	0	3	3	2	1	C-terminal,	D2-small	domain,	of	ClpB	protein
AAA	PF00004.29	gi|297621075|ref|YP_003709212.1|	-	4.1e-24	85.5	0.1	2.6e-12	47.3	0.0	3.2	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Clp_N	PF02861.20	gi|297621075|ref|YP_003709212.1|	-	1.4e-17	63.5	0.0	1e-07	31.9	0.0	3.1	2	0	0	2	2	2	2	Clp	amino	terminal	domain,	pathogenicity	island	component
AAA_5	PF07728.14	gi|297621075|ref|YP_003709212.1|	-	3.9e-17	62.6	0.1	2.5e-12	47.0	0.0	3.1	2	1	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|297621075|ref|YP_003709212.1|	-	5.7e-11	43.1	3.6	0.00025	21.5	0.0	4.7	4	1	1	5	5	4	2	AAA	ATPase	domain
AAA_22	PF13401.6	gi|297621075|ref|YP_003709212.1|	-	1.2e-09	38.6	4.3	0.0039	17.5	0.2	5.2	4	2	0	4	4	2	2	AAA	domain
Sigma54_activat	PF00158.26	gi|297621075|ref|YP_003709212.1|	-	6.7e-09	35.7	0.1	2.5e-05	24.0	0.0	2.9	2	1	0	2	2	2	2	Sigma-54	interaction	domain
IstB_IS21	PF01695.17	gi|297621075|ref|YP_003709212.1|	-	6.7e-07	29.2	0.0	0.04	13.6	0.0	2.9	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
TniB	PF05621.11	gi|297621075|ref|YP_003709212.1|	-	1.7e-06	27.5	0.0	0.0033	16.8	0.0	4.2	3	1	0	3	3	2	1	Bacterial	TniB	protein
AAA_7	PF12775.7	gi|297621075|ref|YP_003709212.1|	-	1.8e-06	27.6	0.0	0.0043	16.6	0.0	2.4	2	0	0	2	2	2	2	P-loop	containing	dynein	motor	region
AAA_14	PF13173.6	gi|297621075|ref|YP_003709212.1|	-	2e-06	27.9	0.5	0.019	15.0	0.0	3.2	3	0	0	3	3	2	2	AAA	domain
RNA_helicase	PF00910.22	gi|297621075|ref|YP_003709212.1|	-	8.4e-05	22.9	0.0	0.19	12.1	0.0	3.0	3	0	0	3	3	2	1	RNA	helicase
Mg_chelatase	PF01078.21	gi|297621075|ref|YP_003709212.1|	-	8.8e-05	22.0	0.1	0.63	9.4	0.0	3.1	3	0	0	3	3	3	2	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.6	gi|297621075|ref|YP_003709212.1|	-	0.00011	22.4	0.0	0.065	13.4	0.0	2.9	2	0	0	2	2	2	1	AAA	domain
RuvB_N	PF05496.12	gi|297621075|ref|YP_003709212.1|	-	0.00011	22.0	1.8	0.9	9.3	0.0	4.0	3	1	0	3	3	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
NACHT	PF05729.12	gi|297621075|ref|YP_003709212.1|	-	0.00012	22.0	0.1	1.1	9.2	0.0	3.6	3	0	0	3	3	3	1	NACHT	domain
Roc	PF08477.13	gi|297621075|ref|YP_003709212.1|	-	0.00014	22.1	0.0	0.091	13.0	0.0	2.6	2	0	0	2	2	2	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
DNA_pol3_delta2	PF13177.6	gi|297621075|ref|YP_003709212.1|	-	0.00017	21.4	0.0	0.011	15.5	0.0	3.6	3	1	1	4	4	2	1	DNA	polymerase	III,	delta	subunit
ResIII	PF04851.15	gi|297621075|ref|YP_003709212.1|	-	0.00026	21.1	1.2	0.6	10.1	0.0	4.2	4	0	0	4	4	3	1	Type	III	restriction	enzyme,	res	subunit
AAA_18	PF13238.6	gi|297621075|ref|YP_003709212.1|	-	0.00086	19.9	3.4	0.055	14.0	0.0	3.4	4	0	0	4	4	2	1	AAA	domain
AAA_24	PF13479.6	gi|297621075|ref|YP_003709212.1|	-	0.0014	18.4	0.0	1.6	8.4	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.6	gi|297621075|ref|YP_003709212.1|	-	0.0019	17.8	0.0	0.18	11.4	0.0	3.0	2	0	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.27	gi|297621075|ref|YP_003709212.1|	-	0.0027	18.2	2.3	0.52	10.8	0.0	3.6	3	0	0	3	3	3	1	ABC	transporter
Zeta_toxin	PF06414.12	gi|297621075|ref|YP_003709212.1|	-	0.003	16.9	0.0	0.37	10.0	0.0	2.8	2	0	0	2	2	2	1	Zeta	toxin
PhoH	PF02562.16	gi|297621075|ref|YP_003709212.1|	-	0.003	17.0	0.0	4.4	6.7	0.0	3.3	3	0	0	3	3	3	0	PhoH-like	protein
TsaE	PF02367.17	gi|297621075|ref|YP_003709212.1|	-	0.0057	16.6	0.0	2.2	8.3	0.0	2.6	2	0	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
RsgA_GTPase	PF03193.16	gi|297621075|ref|YP_003709212.1|	-	0.0088	16.0	0.0	1.1	9.1	0.0	2.8	2	0	0	2	2	2	1	RsgA	GTPase
Phage_GP20	PF06810.11	gi|297621075|ref|YP_003709212.1|	-	0.013	15.3	16.3	5.5	6.8	16.7	2.8	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
ATPase_2	PF01637.18	gi|297621075|ref|YP_003709212.1|	-	0.014	15.4	12.8	1.5	8.7	0.0	4.8	3	3	1	4	4	3	0	ATPase	domain	predominantly	from	Archaea
Torsin	PF06309.11	gi|297621075|ref|YP_003709212.1|	-	0.015	15.4	0.0	0.054	13.6	0.0	1.9	2	0	0	2	2	1	0	Torsin
TIP49	PF06068.13	gi|297621075|ref|YP_003709212.1|	-	0.018	14.2	0.2	1.3	8.1	0.1	2.9	2	1	0	2	2	2	0	TIP49	P-loop	domain
T2SSE	PF00437.20	gi|297621075|ref|YP_003709212.1|	-	0.024	13.7	0.1	0.065	12.3	0.1	1.7	1	1	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_28	PF13521.6	gi|297621075|ref|YP_003709212.1|	-	0.085	13.1	0.0	3.4	7.9	0.0	3.2	3	0	0	3	3	2	0	AAA	domain
DUF1359	PF07097.11	gi|297621075|ref|YP_003709212.1|	-	0.095	12.9	1.6	0.37	11.1	1.6	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1359)
SRP54	PF00448.22	gi|297621075|ref|YP_003709212.1|	-	0.099	12.3	0.0	2.5	7.7	0.0	2.5	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
MCU	PF04678.13	gi|297621075|ref|YP_003709212.1|	-	0.11	12.6	4.0	0.41	10.7	4.0	2.0	1	0	0	1	1	1	0	Mitochondrial	calcium	uniporter
SKA2	PF16740.5	gi|297621075|ref|YP_003709212.1|	-	0.24	11.2	10.8	8.6	6.2	10.8	3.2	1	1	0	1	1	1	0	Spindle	and	kinetochore-associated	protein	2
DUF3584	PF12128.8	gi|297621075|ref|YP_003709212.1|	-	0.31	8.5	15.4	0.49	7.8	15.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_13	PF13166.6	gi|297621075|ref|YP_003709212.1|	-	0.87	8.1	11.9	1.7	7.2	11.9	1.4	1	0	0	1	1	1	0	AAA	domain
DUF87	PF01935.17	gi|297621075|ref|YP_003709212.1|	-	0.89	9.6	0.0	0.89	9.6	0.0	3.9	5	0	0	5	5	3	0	Helicase	HerA,	central	domain
VSG_B	PF13206.6	gi|297621075|ref|YP_003709212.1|	-	1.4	8.1	8.6	2.3	7.4	8.6	1.2	1	0	0	1	1	1	0	Trypanosomal	VSG	domain
AAA_11	PF13086.6	gi|297621075|ref|YP_003709212.1|	-	1.7	8.4	8.4	1.7e+02	1.8	0.0	3.2	3	0	0	3	3	3	0	AAA	domain
DUF4795	PF16043.5	gi|297621075|ref|YP_003709212.1|	-	2.2	7.8	19.1	0.037	13.6	9.1	3.2	5	0	0	5	5	2	0	Domain	of	unknown	function	(DUF4795)
Nre_C	PF04895.12	gi|297621075|ref|YP_003709212.1|	-	2.3	8.2	5.4	4.7	7.2	1.6	2.7	2	0	0	2	2	2	0	Archaeal	Nre,	C-terminal
Exonuc_VII_L	PF02601.15	gi|297621075|ref|YP_003709212.1|	-	2.3	7.7	8.7	0.82	9.2	4.9	2.1	2	0	0	2	2	2	0	Exonuclease	VII,	large	subunit
Uso1_p115_C	PF04871.13	gi|297621075|ref|YP_003709212.1|	-	2.7	8.4	20.4	12	6.3	20.4	2.1	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
DUF4407	PF14362.6	gi|297621075|ref|YP_003709212.1|	-	3	7.1	12.0	0.73	9.1	7.9	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4407)
NPV_P10	PF05531.12	gi|297621075|ref|YP_003709212.1|	-	3.2	8.3	8.6	1.7e+02	2.8	4.3	4.3	3	1	0	3	3	3	0	Nucleopolyhedrovirus	P10	protein
Atg14	PF10186.9	gi|297621075|ref|YP_003709212.1|	-	4	6.4	14.2	8.4	5.4	14.2	1.5	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
UPF0242	PF06785.11	gi|297621075|ref|YP_003709212.1|	-	4.6	7.3	21.7	14	5.7	19.7	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
V_ATPase_I	PF01496.19	gi|297621075|ref|YP_003709212.1|	-	6.5	4.5	8.7	10	3.9	8.7	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF2624	PF11116.8	gi|297621076|ref|YP_003709213.1|	-	0.11	13.4	0.1	0.73	10.8	0.0	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2624)
CC2-LZ	PF16516.5	gi|297621076|ref|YP_003709213.1|	-	6.7	7.1	7.0	14	6.1	0.5	2.7	3	0	0	3	3	3	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
Cob_adeno_trans	PF01923.18	gi|297621077|ref|YP_003709214.1|	-	9.2e-63	211.3	0.0	1e-62	211.1	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
DUF1660	PF07874.11	gi|297621077|ref|YP_003709214.1|	-	0.16	12.5	0.3	0.43	11.1	0.1	1.7	2	0	0	2	2	2	0	Prophage	protein	(DUF1660)
Transglut_core2	PF13369.6	gi|297621078|ref|YP_003709215.1|	-	2.7e-15	56.3	0.0	8.7e-15	54.6	0.0	1.8	2	0	0	2	2	2	1	Transglutaminase-like	superfamily
TPR_1	PF00515.28	gi|297621078|ref|YP_003709215.1|	-	6.9e-07	28.8	4.6	0.001	18.8	0.6	3.5	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297621078|ref|YP_003709215.1|	-	7.4e-06	25.7	6.2	0.0047	16.9	0.4	3.6	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|297621078|ref|YP_003709215.1|	-	6e-05	22.4	1.0	0.00044	19.6	0.3	2.1	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|297621078|ref|YP_003709215.1|	-	0.00036	21.1	1.4	0.4	11.6	0.1	3.1	3	0	0	3	3	2	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297621078|ref|YP_003709215.1|	-	0.00084	19.6	3.3	0.23	11.8	0.2	3.4	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297621078|ref|YP_003709215.1|	-	0.00096	19.6	3.1	0.23	12.0	0.0	3.2	3	1	1	4	4	4	2	Tetratricopeptide	repeat
Transglut_core	PF01841.19	gi|297621078|ref|YP_003709215.1|	-	0.022	15.2	0.0	0.052	14.0	0.0	1.6	1	0	0	1	1	1	0	Transglutaminase-like	superfamily
TPR_16	PF13432.6	gi|297621078|ref|YP_003709215.1|	-	0.034	14.8	0.1	2.7	8.7	0.0	2.6	3	0	0	3	3	2	0	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|297621078|ref|YP_003709215.1|	-	0.21	12.1	1.8	30	5.3	0.0	3.4	4	0	0	4	4	3	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621078|ref|YP_003709215.1|	-	0.23	11.8	4.1	0.24	11.7	0.5	2.8	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|297621078|ref|YP_003709215.1|	-	0.68	10.1	4.6	3.8	7.7	0.4	3.4	3	0	0	3	3	3	0	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297621078|ref|YP_003709215.1|	-	0.75	10.1	6.8	11	6.3	1.1	2.9	2	1	1	3	3	3	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_11	PF13414.6	gi|297621078|ref|YP_003709215.1|	-	1.5	8.6	4.1	0.96	9.2	0.5	2.3	2	0	0	2	2	2	0	TPR	repeat
Glyco_hydro_77	PF02446.17	gi|297621079|ref|YP_003709216.1|	-	6.5e-34	117.6	8.9	9e-19	67.7	0.0	3.5	2	1	1	3	3	3	2	4-alpha-glucanotransferase
IMPDH	PF00478.25	gi|297621080|ref|YP_003709217.1|	-	2e-74	250.6	1.4	2.1e-65	221.0	1.6	2.0	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
FMN_dh	PF01070.18	gi|297621080|ref|YP_003709217.1|	-	0.0012	18.0	4.7	0.0018	17.4	4.7	1.3	1	1	0	1	1	1	1	FMN-dependent	dehydrogenase
Aldolase	PF01081.19	gi|297621080|ref|YP_003709217.1|	-	0.024	14.0	0.5	0.18	11.2	0.1	2.1	1	1	0	2	2	2	0	KDPG	and	KHG	aldolase
CesT	PF05932.13	gi|297621082|ref|YP_003709219.1|	-	5.1e-16	58.9	0.0	6e-16	58.6	0.0	1.1	1	0	0	1	1	1	1	Tir	chaperone	protein	(CesT)	family
HrpJ	PF07201.11	gi|297621083|ref|YP_003709220.1|	-	6.5e-15	55.8	16.9	2.8e-14	53.8	9.1	3.3	2	1	0	2	2	2	1	HrpJ-like	domain
Bep_C_terminal	PF17841.1	gi|297621083|ref|YP_003709220.1|	-	0.0027	17.9	8.6	0.089	13.0	0.1	2.6	1	1	1	2	2	2	2	BID	domain	of	Bartonella	effector	protein	(Bep)
TyeA	PF09059.10	gi|297621083|ref|YP_003709220.1|	-	0.023	14.8	2.3	0.065	13.4	0.3	2.5	2	0	0	2	2	2	0	TyeA
DUF3837	PF12939.7	gi|297621083|ref|YP_003709220.1|	-	0.027	14.9	0.3	0.027	14.9	0.3	4.0	3	1	2	5	5	5	0	Domain	of	unknown	function	(DUF3837)
ATP-synt_G	PF04718.15	gi|297621083|ref|YP_003709220.1|	-	0.51	11.2	4.3	1.9	9.4	0.0	2.9	2	1	0	2	2	2	0	Mitochondrial	ATP	synthase	g	subunit
FHIPEP	PF00771.20	gi|297621084|ref|YP_003709221.1|	-	6.1e-231	768.4	1.6	7e-231	768.3	1.6	1.0	1	0	0	1	1	1	1	FHIPEP	family
Bac_export_2	PF01312.19	gi|297621085|ref|YP_003709222.1|	-	3.9e-100	335.3	7.6	4.4e-100	335.1	7.6	1.0	1	0	0	1	1	1	1	FlhB	HrpN	YscU	SpaS	Family
YchF-GTPase_C	PF06071.13	gi|297621086|ref|YP_003709223.1|	-	3.1e-34	117.0	0.5	6.7e-34	115.9	0.2	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF933)
MMR_HSR1	PF01926.23	gi|297621086|ref|YP_003709223.1|	-	4.3e-25	88.0	0.0	2.2e-24	85.7	0.0	2.1	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|297621086|ref|YP_003709223.1|	-	2.1e-08	33.8	0.1	2.1e-07	30.6	0.0	2.6	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
TGS	PF02824.21	gi|297621086|ref|YP_003709223.1|	-	0.00023	21.1	1.0	0.0062	16.6	0.3	2.6	2	1	0	2	2	2	1	TGS	domain
Roc	PF08477.13	gi|297621086|ref|YP_003709223.1|	-	0.022	15.0	0.0	0.59	10.4	0.0	2.3	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Dynamin_N	PF00350.23	gi|297621086|ref|YP_003709223.1|	-	0.065	13.3	0.1	3.6	7.6	0.1	2.9	2	1	1	4	4	4	0	Dynamin	family
TP53IP5	PF15331.6	gi|297621087|ref|YP_003709224.1|	-	0.15	12.2	0.1	0.18	11.9	0.1	1.2	1	0	0	1	1	1	0	Cellular	tumour	antigen	p53-inducible	5
LRR_4	PF12799.7	gi|297621089|ref|YP_003709226.1|	-	5.4e-06	26.7	17.0	0.044	14.2	0.5	5.8	2	2	4	6	6	6	4	Leucine	Rich	repeats	(2	copies)
LRR_6	PF13516.6	gi|297621089|ref|YP_003709226.1|	-	0.00036	20.4	17.2	6.4	7.1	0.0	6.9	8	0	0	8	8	8	4	Leucine	Rich	repeat
LRR_1	PF00560.33	gi|297621089|ref|YP_003709226.1|	-	1.6	9.6	15.0	8.2	7.4	0.0	6.2	6	1	0	6	6	6	0	Leucine	Rich	Repeat
FAD_syn	PF06574.12	gi|297621090|ref|YP_003709227.1|	-	1.4e-39	135.6	0.0	2e-39	135.0	0.0	1.2	1	0	0	1	1	1	1	FAD	synthetase
Flavokinase	PF01687.17	gi|297621090|ref|YP_003709227.1|	-	1.5e-30	105.8	0.0	2.6e-30	105.0	0.0	1.4	1	0	0	1	1	1	1	Riboflavin	kinase
CTP_transf_like	PF01467.26	gi|297621090|ref|YP_003709227.1|	-	0.01	16.0	0.2	0.022	14.9	0.2	1.8	1	1	0	1	1	1	0	Cytidylyltransferase-like
Bacillus_HBL	PF05791.11	gi|297621090|ref|YP_003709227.1|	-	0.054	13.3	0.2	3.3	7.5	0.0	2.2	2	0	0	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF2067	PF09840.9	gi|297621090|ref|YP_003709227.1|	-	0.14	11.7	0.0	0.25	10.9	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
TruB_N	PF01509.18	gi|297621091|ref|YP_003709228.1|	-	1.8e-49	167.9	0.1	2.5e-49	167.5	0.1	1.2	1	0	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
TruB_C_2	PF16198.5	gi|297621091|ref|YP_003709228.1|	-	4.8e-10	39.4	0.1	4.8e-10	39.4	0.1	1.8	2	0	0	2	2	2	1	tRNA	pseudouridylate	synthase	B	C-terminal	domain
RBFA	PF02033.18	gi|297621092|ref|YP_003709229.1|	-	5.9e-28	97.4	0.8	7e-28	97.2	0.8	1.1	1	0	0	1	1	1	1	Ribosome-binding	factor	A
Recep_L_domain	PF01030.24	gi|297621092|ref|YP_003709229.1|	-	0.13	12.3	0.1	0.18	11.9	0.1	1.3	1	0	0	1	1	1	0	Receptor	L	domain
Cas9-BH	PF16593.5	gi|297621092|ref|YP_003709229.1|	-	0.23	11.2	0.9	0.38	10.5	0.1	1.7	2	0	0	2	2	2	0	Bridge	helix	of	CRISPR-associated	endonuclease	Cas9
IF-2	PF11987.8	gi|297621093|ref|YP_003709230.1|	-	2.9e-32	110.9	3.0	7.3e-32	109.6	1.2	2.7	2	0	0	2	2	2	1	Translation-initiation	factor	2
GTP_EFTU	PF00009.27	gi|297621093|ref|YP_003709230.1|	-	1.3e-28	99.9	4.8	7.7e-28	97.4	0.8	3.0	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
IF2_N	PF04760.15	gi|297621093|ref|YP_003709230.1|	-	1.4e-10	40.8	0.1	4.8e-10	39.1	0.1	1.9	1	0	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
GTP_EFTU_D2	PF03144.25	gi|297621093|ref|YP_003709230.1|	-	1e-07	32.2	4.0	5.4e-05	23.5	2.1	3.2	2	0	0	2	2	2	2	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|297621093|ref|YP_003709230.1|	-	4.9e-07	29.8	0.2	2.2e-06	27.7	0.2	2.2	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Ras	PF00071.22	gi|297621093|ref|YP_003709230.1|	-	1.2e-05	24.9	0.0	1.2e-05	24.9	0.0	2.8	3	0	0	3	3	3	1	Ras	family
Arf	PF00025.21	gi|297621093|ref|YP_003709230.1|	-	2.6e-05	23.8	0.0	2.6e-05	23.8	0.0	3.0	3	1	1	4	4	4	1	ADP-ribosylation	factor	family
MeaB	PF03308.16	gi|297621093|ref|YP_003709230.1|	-	0.00017	20.7	0.7	0.0036	16.3	0.2	2.6	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
GTP_EFTU_D4	PF14578.6	gi|297621093|ref|YP_003709230.1|	-	0.001	18.9	5.4	0.0023	17.8	2.6	2.6	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	4
RsgA_GTPase	PF03193.16	gi|297621093|ref|YP_003709230.1|	-	0.0024	17.8	7.5	0.044	13.7	0.0	3.5	3	1	1	4	4	4	2	RsgA	GTPase
Roc	PF08477.13	gi|297621093|ref|YP_003709230.1|	-	0.0061	16.8	0.1	0.014	15.6	0.1	1.7	1	0	0	1	1	1	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
VWA	PF00092.28	gi|297621093|ref|YP_003709230.1|	-	0.007	16.6	0.9	1.1	9.5	0.1	2.5	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
PduV-EutP	PF10662.9	gi|297621093|ref|YP_003709230.1|	-	0.011	15.5	0.1	0.04	13.6	0.1	2.0	1	1	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
Dynamin_N	PF00350.23	gi|297621093|ref|YP_003709230.1|	-	3.7	7.6	8.3	7.5	6.6	0.0	4.0	3	1	1	4	4	4	0	Dynamin	family
NusA_N	PF08529.11	gi|297621094|ref|YP_003709231.1|	-	5.1e-38	130.2	4.6	1.6e-37	128.5	4.4	2.0	2	0	0	2	2	2	1	NusA	N-terminal	domain
KH_5	PF13184.6	gi|297621094|ref|YP_003709231.1|	-	3.8e-26	91.0	0.5	4e-25	87.7	0.2	2.5	2	0	0	2	2	2	1	NusA-like	KH	domain
S1	PF00575.23	gi|297621094|ref|YP_003709231.1|	-	2.5e-05	24.5	0.2	2.5e-05	24.5	0.2	2.4	2	1	0	3	3	3	1	S1	RNA	binding	domain
KH_4	PF13083.6	gi|297621094|ref|YP_003709231.1|	-	0.002	18.0	0.4	0.014	15.3	0.1	2.5	2	0	0	2	2	2	1	KH	domain
HHH_5	PF14520.6	gi|297621094|ref|YP_003709231.1|	-	0.018	15.6	0.0	0.07	13.7	0.0	2.0	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
KH_2	PF07650.17	gi|297621094|ref|YP_003709231.1|	-	0.27	11.1	5.0	0.31	10.9	0.1	3.2	3	1	0	3	3	3	0	KH	domain
S1	PF00575.23	gi|297621095|ref|YP_003709232.1|	-	4.1e-97	318.6	34.0	1.2e-18	67.2	0.3	6.1	6	0	0	6	6	6	6	S1	RNA	binding	domain
S1_2	PF13509.6	gi|297621095|ref|YP_003709232.1|	-	3.8e-12	46.1	8.8	0.077	13.1	0.0	7.3	6	3	0	6	6	6	4	S1	domain
PCB_OB	PF17092.5	gi|297621095|ref|YP_003709232.1|	-	8.2e-10	39.4	4.2	0.088	13.6	0.0	6.5	2	1	5	7	7	7	3	Penicillin-binding	protein	OB-like	domain
DUF2110	PF09883.9	gi|297621095|ref|YP_003709232.1|	-	0.00056	19.6	5.8	2.6	7.6	0.0	4.7	3	2	2	5	5	5	2	Uncharacterized	protein	conserved	in	archaea	(DUF2110)
MRP-S35	PF10246.9	gi|297621095|ref|YP_003709232.1|	-	0.011	15.7	0.0	8	6.5	0.0	2.9	2	0	0	2	2	2	0	Mitochondrial	ribosomal	protein	MRP-S35
DUF1344	PF07076.11	gi|297621095|ref|YP_003709232.1|	-	0.03	14.3	0.5	6.4	6.8	0.0	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1344)
RuvA_N	PF01330.21	gi|297621095|ref|YP_003709232.1|	-	0.057	13.5	6.9	1	9.5	0.0	4.6	5	0	0	5	5	5	0	RuvA	N	terminal	domain
AbrB_C	PF18277.1	gi|297621095|ref|YP_003709232.1|	-	0.087	12.5	0.0	0.39	10.4	0.0	2.2	1	0	0	1	1	1	0	AbrB	C-terminal	domain
CsrA	PF02599.16	gi|297621095|ref|YP_003709232.1|	-	0.27	11.2	0.1	0.27	11.2	0.1	4.9	5	1	1	6	6	6	0	Global	regulator	protein	family
RNA_pol_Rbc25	PF08292.12	gi|297621095|ref|YP_003709232.1|	-	0.3	11.3	6.3	2.9	8.2	0.0	4.4	5	0	0	5	5	5	0	RNA	polymerase	III	subunit	Rpc25
ProQ_C	PF17516.2	gi|297621095|ref|YP_003709232.1|	-	0.55	9.7	9.2	2	7.9	0.0	4.6	5	0	0	5	5	5	0	ProQ	C-terminal	domain
PTPS	PF01242.19	gi|297621096|ref|YP_003709233.1|	-	3.4e-30	104.5	0.3	4.2e-30	104.2	0.3	1.1	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
AA_kinase	PF00696.28	gi|297621097|ref|YP_003709234.1|	-	6.8e-40	137.2	0.0	7.9e-40	137.0	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
Diphthamide_syn	PF01866.17	gi|297621097|ref|YP_003709234.1|	-	0.12	11.8	0.1	0.16	11.4	0.1	1.1	1	0	0	1	1	1	0	Putative	diphthamide	synthesis	protein
Branch_AA_trans	PF05525.13	gi|297621099|ref|YP_003709236.1|	-	3.3e-57	194.3	29.1	4e-57	194.0	29.1	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	protein
Ribul_P_3_epim	PF00834.19	gi|297621101|ref|YP_003709238.1|	-	4.7e-67	225.2	0.1	9.1e-67	224.3	0.1	1.4	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
His_biosynth	PF00977.21	gi|297621101|ref|YP_003709238.1|	-	0.011	15.2	0.0	1.1	8.6	0.0	2.5	2	1	0	2	2	2	0	Histidine	biosynthesis	protein
DUF1847	PF08901.11	gi|297621101|ref|YP_003709238.1|	-	0.027	14.1	0.0	0.041	13.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1847)
PEP_hydrolase	PF09370.10	gi|297621101|ref|YP_003709238.1|	-	0.2	10.9	0.8	3.2	6.9	0.0	2.5	2	1	0	3	3	3	0	Phosphoenolpyruvate	hydrolase-like
Elong-fact-P_C	PF09285.11	gi|297621102|ref|YP_003709239.1|	-	1.9e-17	62.7	1.7	1e-16	60.4	0.2	2.4	2	1	0	2	2	2	1	Elongation	factor	P,	C-terminal
EFP	PF01132.20	gi|297621102|ref|YP_003709239.1|	-	9.2e-13	48.0	0.0	2.4e-12	46.7	0.0	1.7	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	OB	domain
EFP_N	PF08207.12	gi|297621102|ref|YP_003709239.1|	-	4.7e-10	39.3	0.5	2.1e-09	37.3	0.1	2.1	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
YcgR_2	PF12945.7	gi|297621102|ref|YP_003709239.1|	-	0.035	14.3	0.1	0.8	9.9	0.0	2.7	3	0	0	3	3	3	0	Flagellar	protein	YcgR
DUF3511	PF12023.8	gi|297621102|ref|YP_003709239.1|	-	0.038	13.8	0.0	0.059	13.2	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3511)
Biotin_lipoyl	PF00364.22	gi|297621103|ref|YP_003709240.1|	-	2.2e-22	78.6	1.4	2.7e-22	78.4	0.7	1.5	2	0	0	2	2	2	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.6	gi|297621103|ref|YP_003709240.1|	-	0.011	15.5	0.4	0.046	13.6	0.0	2.1	2	0	0	2	2	2	0	Biotin-lipoyl	like
RnfC_N	PF13375.6	gi|297621103|ref|YP_003709240.1|	-	0.03	14.3	0.1	0.051	13.5	0.1	1.5	1	0	0	1	1	1	0	RnfC	Barrel	sandwich	hybrid	domain
HlyD_3	PF13437.6	gi|297621103|ref|YP_003709240.1|	-	0.031	15.0	0.2	0.078	13.7	0.1	1.8	2	0	0	2	2	2	0	HlyD	family	secretion	protein
HlyD_D23	PF16576.5	gi|297621103|ref|YP_003709240.1|	-	0.092	11.9	1.0	0.28	10.4	0.1	1.9	2	0	0	2	2	2	0	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
GCV_H	PF01597.19	gi|297621103|ref|YP_003709240.1|	-	0.12	12.3	0.6	0.12	12.3	0.6	1.9	2	0	0	2	2	2	0	Glycine	cleavage	H-protein
CPSase_L_D2	PF02786.17	gi|297621104|ref|YP_003709241.1|	-	1.5e-77	259.8	0.2	2.2e-77	259.3	0.2	1.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Biotin_carb_N	PF00289.22	gi|297621104|ref|YP_003709241.1|	-	1.1e-44	151.5	0.1	3e-44	150.1	0.0	1.8	2	0	0	2	2	2	1	Biotin	carboxylase,	N-terminal	domain
Biotin_carb_C	PF02785.19	gi|297621104|ref|YP_003709241.1|	-	1.8e-36	124.5	0.0	3.9e-36	123.4	0.0	1.6	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
Dala_Dala_lig_C	PF07478.13	gi|297621104|ref|YP_003709241.1|	-	5.3e-09	35.9	0.0	1.6e-08	34.3	0.0	1.7	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.22	gi|297621104|ref|YP_003709241.1|	-	6.8e-08	32.3	0.2	2e-07	30.8	0.1	1.7	2	0	0	2	2	2	1	ATP-grasp	domain
RimK	PF08443.11	gi|297621104|ref|YP_003709241.1|	-	7e-05	22.5	0.1	0.14	11.7	0.0	2.2	2	0	0	2	2	2	2	RimK-like	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|297621104|ref|YP_003709241.1|	-	0.0004	20.1	0.0	0.00084	19.1	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATPgrasp_ST	PF14397.6	gi|297621104|ref|YP_003709241.1|	-	0.0011	18.3	0.0	0.0057	15.9	0.0	1.9	2	0	0	2	2	2	1	Sugar-transfer	associated	ATP-grasp
ATP-grasp_3	PF02655.14	gi|297621104|ref|YP_003709241.1|	-	0.0016	18.5	0.1	0.0037	17.3	0.1	1.7	1	0	0	1	1	1	1	ATP-grasp	domain
Oxidored_nitro	PF00148.19	gi|297621104|ref|YP_003709241.1|	-	0.048	12.4	0.0	0.068	11.9	0.0	1.3	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
Lysine_decarbox	PF03641.14	gi|297621107|ref|YP_003709244.1|	-	2.2e-29	102.2	0.0	3.9e-29	101.4	0.0	1.4	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
LDcluster4	PF18306.1	gi|297621107|ref|YP_003709244.1|	-	3.2e-16	59.3	0.0	4.8e-16	58.7	0.0	1.2	1	0	0	1	1	1	1	SLOG	cluster4	family
DNA_processg_A	PF02481.15	gi|297621107|ref|YP_003709244.1|	-	0.0042	16.3	0.1	0.0063	15.8	0.1	1.2	1	0	0	1	1	1	1	DNA	recombination-mediator	protein	A
LacAB_rpiB	PF02502.18	gi|297621107|ref|YP_003709244.1|	-	0.1	12.6	0.0	0.27	11.2	0.0	1.6	2	0	0	2	2	2	0	Ribose/Galactose	Isomerase
Fer4_16	PF13484.6	gi|297621108|ref|YP_003709245.1|	-	3.1e-18	66.4	4.5	6.2e-18	65.5	4.5	1.5	1	0	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
DUF1730	PF08331.10	gi|297621108|ref|YP_003709245.1|	-	2.4e-15	56.2	0.0	3.6e-15	55.6	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1730)
Fer4	PF00037.27	gi|297621108|ref|YP_003709245.1|	-	5.7e-06	25.9	7.4	0.015	15.1	1.5	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|297621108|ref|YP_003709245.1|	-	1.4e-05	25.6	7.6	0.00017	22.1	8.0	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|297621108|ref|YP_003709245.1|	-	3.2e-05	24.0	4.0	0.029	14.5	0.7	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|297621108|ref|YP_003709245.1|	-	0.00017	21.7	6.0	0.013	15.6	0.9	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|297621108|ref|YP_003709245.1|	-	0.0015	18.6	4.7	0.66	10.1	0.5	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|297621108|ref|YP_003709245.1|	-	0.0031	17.5	12.6	0.023	14.7	1.7	2.6	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|297621108|ref|YP_003709245.1|	-	0.0049	16.9	11.9	0.32	11.2	0.6	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|297621108|ref|YP_003709245.1|	-	0.012	16.1	8.5	0.038	14.4	8.5	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|297621108|ref|YP_003709245.1|	-	0.039	14.2	2.8	24	5.2	1.3	3.0	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|297621108|ref|YP_003709245.1|	-	0.06	14.3	9.5	1.5	9.9	3.2	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|297621108|ref|YP_003709245.1|	-	0.28	11.7	9.5	2.8	8.6	2.0	2.2	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|297621108|ref|YP_003709245.1|	-	2	9.3	6.4	9.7	7.1	0.6	3.0	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|297621108|ref|YP_003709245.1|	-	3.7	8.3	13.4	3.6	8.3	0.4	2.9	3	1	0	3	3	2	0	4Fe-4S	binding	domain
YitT_membrane	PF02588.15	gi|297621109|ref|YP_003709246.1|	-	1.4e-49	168.3	24.6	1.9e-49	167.8	24.6	1.2	1	0	0	1	1	1	1	Uncharacterised	5xTM	membrane	BCR,	YitT	family	COG1284
DUF2179	PF10035.9	gi|297621109|ref|YP_003709246.1|	-	6.9e-18	64.1	0.0	1.4e-17	63.1	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2179)
FMN_red	PF03358.15	gi|297621111|ref|YP_003709248.1|	-	2.5e-35	121.5	0.0	3.7e-35	121.0	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|297621111|ref|YP_003709248.1|	-	1.4e-11	44.5	0.0	1.6e-11	44.3	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
SurE	PF01975.17	gi|297621112|ref|YP_003709249.1|	-	1.9e-60	204.0	0.0	2.2e-60	203.8	0.0	1.1	1	0	0	1	1	1	1	Survival	protein	SurE
AAA_5	PF07728.14	gi|297621114|ref|YP_003709251.1|	-	3.1e-20	72.6	0.0	5e-20	71.9	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.11	gi|297621114|ref|YP_003709251.1|	-	4.8e-08	32.9	0.0	7.5e-08	32.3	0.0	1.2	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA	PF00004.29	gi|297621114|ref|YP_003709251.1|	-	2.3e-05	24.8	0.0	4.3e-05	23.9	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MCM	PF00493.23	gi|297621114|ref|YP_003709251.1|	-	3.5e-05	23.0	0.0	5.4e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	MCM	P-loop	domain
AAA_22	PF13401.6	gi|297621114|ref|YP_003709251.1|	-	3.6e-05	24.0	0.0	0.00025	21.3	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
RuvB_N	PF05496.12	gi|297621114|ref|YP_003709251.1|	-	0.00016	21.5	0.0	0.00079	19.2	0.0	2.0	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_16	PF13191.6	gi|297621114|ref|YP_003709251.1|	-	0.00072	20.0	0.0	0.0069	16.8	0.0	2.0	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_33	PF13671.6	gi|297621114|ref|YP_003709251.1|	-	0.0031	17.7	0.0	0.0069	16.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|297621114|ref|YP_003709251.1|	-	0.0038	17.8	0.2	0.015	15.9	0.1	2.3	1	1	1	2	2	2	1	AAA	domain
NTPase_1	PF03266.15	gi|297621114|ref|YP_003709251.1|	-	0.023	14.6	0.1	0.44	10.5	0.0	2.2	2	0	0	2	2	2	0	NTPase
IstB_IS21	PF01695.17	gi|297621114|ref|YP_003709251.1|	-	0.044	13.5	0.0	0.076	12.7	0.0	1.4	1	1	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_14	PF13173.6	gi|297621114|ref|YP_003709251.1|	-	0.061	13.4	0.0	0.2	11.7	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.6	gi|297621114|ref|YP_003709251.1|	-	0.099	12.4	0.1	0.19	11.4	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
TIP49	PF06068.13	gi|297621114|ref|YP_003709251.1|	-	0.15	11.2	0.0	0.23	10.6	0.0	1.3	1	0	0	1	1	1	0	TIP49	P-loop	domain
RNA_helicase	PF00910.22	gi|297621114|ref|YP_003709251.1|	-	0.16	12.4	0.0	0.32	11.4	0.0	1.7	1	1	0	1	1	1	0	RNA	helicase
NB-ARC	PF00931.22	gi|297621114|ref|YP_003709251.1|	-	0.19	10.9	0.0	0.4	9.8	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
ATP_bind_3	PF01171.20	gi|297621115|ref|YP_003709252.1|	-	2.4e-20	73.1	0.0	4.3e-20	72.2	0.0	1.4	2	0	0	2	2	2	1	PP-loop	family
tRNA_Me_trans	PF03054.16	gi|297621115|ref|YP_003709252.1|	-	5.9e-05	22.0	0.0	0.00069	18.5	0.0	2.4	1	1	0	1	1	1	1	tRNA	methyl	transferase
Asn_synthase	PF00733.21	gi|297621115|ref|YP_003709252.1|	-	0.052	13.2	0.0	0.12	12.0	0.0	1.6	2	0	0	2	2	2	0	Asparagine	synthase
SEC-C	PF02810.15	gi|297621116|ref|YP_003709253.1|	-	5.4e-11	42.2	12.6	1.3e-10	40.9	12.6	1.7	1	0	0	1	1	1	1	SEC-C	motif
DUF2065	PF09838.9	gi|297621117|ref|YP_003709254.1|	-	0.0012	18.8	8.5	0.12	12.4	0.5	2.9	2	1	0	2	2	2	2	Uncharacterized	protein	conserved	in	bacteria	(DUF2065)
DUF373	PF04123.13	gi|297621117|ref|YP_003709254.1|	-	0.3	10.5	8.5	2.6	7.4	1.2	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF373)
DUF3040	PF11239.8	gi|297621117|ref|YP_003709254.1|	-	0.32	11.3	3.5	14	6.1	2.6	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
Methyltransf_3	PF01596.17	gi|297621118|ref|YP_003709255.1|	-	2.7e-42	144.3	0.0	3.6e-42	143.9	0.0	1.0	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_24	PF13578.6	gi|297621118|ref|YP_003709255.1|	-	9.2e-16	58.8	0.0	1.3e-15	58.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|297621118|ref|YP_003709255.1|	-	8.6e-12	45.3	0.0	1.1e-11	44.9	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.6	gi|297621118|ref|YP_003709255.1|	-	3.3e-09	36.7	0.0	4e-09	36.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297621118|ref|YP_003709255.1|	-	8e-08	32.9	0.0	1.7e-07	31.9	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|297621118|ref|YP_003709255.1|	-	0.00011	22.2	0.0	0.00016	21.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297621118|ref|YP_003709255.1|	-	0.00015	22.3	0.0	0.00031	21.3	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297621118|ref|YP_003709255.1|	-	0.00044	20.1	0.0	0.00091	19.1	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|297621118|ref|YP_003709255.1|	-	0.0005	19.5	0.0	0.00067	19.1	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
GCD14	PF08704.10	gi|297621118|ref|YP_003709255.1|	-	0.0026	17.5	0.0	0.0033	17.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
TrmK	PF04816.12	gi|297621118|ref|YP_003709255.1|	-	0.0073	15.9	0.0	0.01	15.4	0.0	1.2	1	0	0	1	1	1	1	tRNA	(adenine(22)-N(1))-methyltransferase
Cons_hypoth95	PF03602.15	gi|297621118|ref|YP_003709255.1|	-	0.037	13.7	0.0	0.059	13.0	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_15	PF09445.10	gi|297621118|ref|YP_003709255.1|	-	0.057	13.0	0.0	0.085	12.4	0.0	1.2	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_30	PF05430.11	gi|297621118|ref|YP_003709255.1|	-	0.061	13.2	0.1	0.17	11.7	0.1	1.7	1	1	0	1	1	1	0	S-adenosyl-L-methionine-dependent	methyltransferase
UPF0020	PF01170.18	gi|297621118|ref|YP_003709255.1|	-	0.087	12.5	0.0	0.13	12.0	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_12	PF08242.12	gi|297621118|ref|YP_003709255.1|	-	0.17	12.6	0.0	0.31	11.8	0.0	1.5	1	1	0	1	1	1	0	Methyltransferase	domain
PMSR	PF01625.21	gi|297621119|ref|YP_003709256.1|	-	8.8e-60	201.3	0.4	1.2e-59	200.9	0.4	1.2	1	0	0	1	1	1	1	Peptide	methionine	sulfoxide	reductase
SelR	PF01641.18	gi|297621119|ref|YP_003709256.1|	-	2e-40	137.7	0.0	3.4e-40	136.9	0.0	1.4	1	0	0	1	1	1	1	SelR	domain
Ribosomal_L37e	PF01907.19	gi|297621119|ref|YP_003709256.1|	-	0.00085	19.4	3.1	0.17	12.1	0.2	2.5	2	0	0	2	2	2	2	Ribosomal	protein	L37e
RIG-I_C-RD	PF11648.8	gi|297621119|ref|YP_003709256.1|	-	0.0072	16.5	0.2	5.8	7.2	0.0	2.9	3	0	0	3	3	3	2	C-terminal	domain	of	RIG-I
Zn_ribbon_SprT	PF17283.2	gi|297621119|ref|YP_003709256.1|	-	0.015	15.2	1.0	4.7	7.2	0.1	2.5	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
Yippee-Mis18	PF03226.14	gi|297621119|ref|YP_003709256.1|	-	0.22	11.7	1.1	2.3	8.5	1.1	2.2	1	1	0	1	1	1	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
Pyr_redox_3	PF13738.6	gi|297621120|ref|YP_003709257.1|	-	3.4e-62	210.4	0.0	4.2e-62	210.1	0.0	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|297621120|ref|YP_003709257.1|	-	2.2e-25	89.5	0.3	4.7e-25	88.4	0.4	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.6	gi|297621120|ref|YP_003709257.1|	-	1.3e-09	37.7	0.1	1.7e-06	27.5	0.0	2.1	2	0	0	2	2	2	2	L-lysine	6-monooxygenase	(NADPH-requiring)
Pyr_redox	PF00070.27	gi|297621120|ref|YP_003709257.1|	-	8.9e-07	29.4	0.1	0.017	15.7	0.1	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|297621120|ref|YP_003709257.1|	-	2.7e-05	23.0	3.8	0.0093	14.7	0.0	2.8	3	0	0	3	3	3	2	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|297621120|ref|YP_003709257.1|	-	0.00057	19.2	0.1	0.0011	18.3	0.1	1.5	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_9	PF13454.6	gi|297621120|ref|YP_003709257.1|	-	0.00066	19.7	0.5	0.13	12.2	0.0	2.5	2	0	0	2	2	2	1	FAD-NAD(P)-binding
NAD_binding_7	PF13241.6	gi|297621120|ref|YP_003709257.1|	-	0.0011	19.3	0.1	0.041	14.3	0.0	2.5	2	2	0	2	2	2	1	Putative	NAD(P)-binding
DAO	PF01266.24	gi|297621120|ref|YP_003709257.1|	-	0.0056	16.3	1.5	1.9	7.9	0.0	2.8	2	1	0	3	3	3	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|297621120|ref|YP_003709257.1|	-	0.047	13.9	0.1	0.2	11.9	0.0	2.2	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|297621120|ref|YP_003709257.1|	-	0.065	12.3	3.4	1.6	7.8	0.3	3.0	2	1	0	3	3	3	0	FAD	binding	domain
Thi4	PF01946.17	gi|297621120|ref|YP_003709257.1|	-	0.15	11.3	0.2	13	4.9	0.0	2.3	2	0	0	2	2	2	0	Thi4	family
ThiF	PF00899.21	gi|297621120|ref|YP_003709257.1|	-	0.17	11.2	0.1	0.33	10.3	0.1	1.4	1	0	0	1	1	1	0	ThiF	family
GIDA	PF01134.22	gi|297621120|ref|YP_003709257.1|	-	0.29	10.2	8.9	4.7	6.2	0.1	3.4	3	1	0	4	4	4	0	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.7	gi|297621120|ref|YP_003709257.1|	-	8.2	5.6	7.0	6.6	5.9	0.5	2.8	3	0	0	3	3	3	0	FAD	dependent	oxidoreductase
DUF443	PF04276.12	gi|297621121|ref|YP_003709258.1|	-	3.8	7.3	5.6	1.3	8.8	2.5	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF443)
Aconitase	PF00330.20	gi|297621123|ref|YP_003709260.1|	-	6.5e-173	576.0	0.0	9e-173	575.5	0.0	1.2	1	0	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.19	gi|297621123|ref|YP_003709260.1|	-	4.3e-42	143.6	0.0	1.1e-41	142.2	0.0	1.7	2	0	0	2	2	2	1	Aconitase	C-terminal	domain
MafB19-deam	PF14437.6	gi|297621124|ref|YP_003709261.1|	-	3.9e-14	52.6	0.0	4.8e-14	52.3	0.0	1.1	1	0	0	1	1	1	1	MafB19-like	deaminase
dCMP_cyt_deam_1	PF00383.23	gi|297621124|ref|YP_003709261.1|	-	1e-08	35.0	0.1	1.4e-08	34.5	0.1	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
Bd3614-deam	PF14439.6	gi|297621124|ref|YP_003709261.1|	-	0.006	16.6	3.4	0.67	10.0	3.4	2.1	1	1	0	1	1	1	1	Bd3614-like	deaminase
DUF169	PF02596.15	gi|297621124|ref|YP_003709261.1|	-	0.084	12.8	0.0	0.11	12.5	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	ArCR,	COG2043
Legionella_OMP	PF05150.12	gi|297621126|ref|YP_003709263.1|	-	1.1e-06	27.8	0.6	3.2e-06	26.3	0.6	1.7	1	1	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
BBP7	PF07585.11	gi|297621126|ref|YP_003709263.1|	-	4.2e-06	26.2	0.5	2.2e-05	23.9	0.5	1.9	1	1	0	1	1	1	1	Putative	beta	barrel	porin-7	(BBP7)
EamA	PF00892.20	gi|297621127|ref|YP_003709264.1|	-	3.5e-43	147.1	40.6	1.4e-23	83.6	20.1	2.0	2	0	0	2	2	2	2	EamA-like	transporter	family
RseC_MucC	PF04246.12	gi|297621127|ref|YP_003709264.1|	-	0.024	14.6	1.5	0.024	14.6	1.5	3.8	1	1	4	5	5	5	0	Positive	regulator	of	sigma(E),	RseC/MucC
UbiA	PF01040.18	gi|297621127|ref|YP_003709264.1|	-	0.3	10.3	29.4	0.0068	15.7	16.9	3.0	1	1	1	2	2	2	0	UbiA	prenyltransferase	family
CrgA	PF06781.12	gi|297621127|ref|YP_003709264.1|	-	2.1	8.5	6.0	3.9	7.6	1.8	2.8	1	1	1	2	2	2	0	Cell	division	protein	CrgA
NMN_transporter	PF04973.12	gi|297621128|ref|YP_003709265.1|	-	5.2e-08	33.0	7.8	5.9e-08	32.9	7.8	1.0	1	0	0	1	1	1	1	Nicotinamide	mononucleotide	transporter
Imp-YgjV	PF10688.9	gi|297621128|ref|YP_003709265.1|	-	0.22	11.3	7.4	0.32	10.8	7.4	1.3	1	1	0	1	1	1	0	Bacterial	inner	membrane	protein
TK	PF00265.18	gi|297621129|ref|YP_003709266.1|	-	3.5e-52	176.8	0.1	4e-52	176.6	0.1	1.0	1	0	0	1	1	1	1	Thymidine	kinase
ABC_tran	PF00005.27	gi|297621130|ref|YP_003709267.1|	-	8.8e-48	162.3	4.4	1.3e-22	80.8	0.0	3.9	4	0	0	4	4	4	2	ABC	transporter
ABC_tran_Xtn	PF12848.7	gi|297621130|ref|YP_003709267.1|	-	1.4e-13	50.6	4.1	1.4e-13	50.6	4.1	2.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|297621130|ref|YP_003709267.1|	-	5e-13	49.5	16.4	0.0071	16.2	0.2	5.1	3	2	1	5	5	5	4	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|297621130|ref|YP_003709267.1|	-	1.9e-10	40.5	1.9	0.0045	16.5	0.0	4.4	3	1	0	4	4	4	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|297621130|ref|YP_003709267.1|	-	2.7e-08	33.4	0.2	0.0034	17.1	0.1	2.4	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|297621130|ref|YP_003709267.1|	-	7.7e-06	25.9	0.2	0.16	11.9	0.0	2.7	2	0	0	2	2	2	2	RsgA	GTPase
MMR_HSR1	PF01926.23	gi|297621130|ref|YP_003709267.1|	-	1e-05	25.6	0.5	0.086	12.9	0.0	2.9	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
AAA_15	PF13175.6	gi|297621130|ref|YP_003709267.1|	-	0.00036	20.4	22.2	0.31	10.7	0.1	4.2	3	1	0	3	3	3	2	AAA	ATPase	domain
AAA_22	PF13401.6	gi|297621130|ref|YP_003709267.1|	-	0.00078	19.7	1.9	0.21	11.9	0.1	3.4	2	2	1	3	3	3	1	AAA	domain
RNA_helicase	PF00910.22	gi|297621130|ref|YP_003709267.1|	-	0.00087	19.7	0.1	0.62	10.5	0.0	2.7	2	0	0	2	2	2	1	RNA	helicase
DUF87	PF01935.17	gi|297621130|ref|YP_003709267.1|	-	0.0014	18.8	14.2	0.023	14.8	0.0	4.4	4	1	0	4	4	4	1	Helicase	HerA,	central	domain
NACHT	PF05729.12	gi|297621130|ref|YP_003709267.1|	-	0.0017	18.3	0.0	0.4	10.6	0.0	2.5	2	0	0	2	2	2	1	NACHT	domain
AAA_33	PF13671.6	gi|297621130|ref|YP_003709267.1|	-	0.0043	17.2	1.7	3.7	7.7	0.0	3.3	4	0	0	4	4	3	2	AAA	domain
AAA	PF00004.29	gi|297621130|ref|YP_003709267.1|	-	0.0045	17.4	2.3	0.72	10.3	0.1	3.6	3	2	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.6	gi|297621130|ref|YP_003709267.1|	-	0.014	15.1	0.2	4	7.1	0.0	3.3	3	0	0	3	3	3	0	AAA	domain
SbcCD_C	PF13558.6	gi|297621130|ref|YP_003709267.1|	-	0.027	14.7	0.4	1.8	8.8	0.3	3.1	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_18	PF13238.6	gi|297621130|ref|YP_003709267.1|	-	0.028	15.0	1.5	2.6	8.6	0.1	3.3	3	1	0	3	3	3	0	AAA	domain
CLP1_P	PF16575.5	gi|297621130|ref|YP_003709267.1|	-	0.029	14.2	1.3	1.4	8.7	0.1	2.8	3	0	0	3	3	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
NB-ARC	PF00931.22	gi|297621130|ref|YP_003709267.1|	-	0.045	12.9	0.2	9.1	5.4	0.0	2.7	2	1	0	2	2	2	0	NB-ARC	domain
AAA_16	PF13191.6	gi|297621130|ref|YP_003709267.1|	-	0.053	13.9	0.6	5.4	7.4	0.0	3.0	3	0	0	3	3	3	0	AAA	ATPase	domain
MobB	PF03205.14	gi|297621130|ref|YP_003709267.1|	-	0.054	13.4	0.1	10	6.0	0.0	2.6	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
FtsK_SpoIIIE	PF01580.18	gi|297621130|ref|YP_003709267.1|	-	0.077	12.3	0.0	5.9	6.2	0.0	2.4	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
AAA_23	PF13476.6	gi|297621130|ref|YP_003709267.1|	-	0.3	11.6	38.0	0.83	10.1	11.0	4.3	2	2	0	2	2	2	0	AAA	domain
ABC_tran_CTD	PF16326.5	gi|297621130|ref|YP_003709267.1|	-	1.5	9.1	16.9	0.087	13.1	7.2	2.9	2	1	0	2	2	2	0	ABC	transporter	C-terminal	domain
Dynamin_N	PF00350.23	gi|297621130|ref|YP_003709267.1|	-	2.2	8.3	12.2	2.4	8.2	0.0	3.8	4	0	0	4	4	4	0	Dynamin	family
Atg14	PF10186.9	gi|297621130|ref|YP_003709267.1|	-	5.1	6.1	16.9	0.28	10.2	4.9	2.2	2	0	0	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Spc7	PF08317.11	gi|297621130|ref|YP_003709267.1|	-	9.7	5.0	21.6	0.73	8.7	10.1	2.2	2	0	0	2	2	2	0	Spc7	kinetochore	protein
SnoaL	PF07366.12	gi|297621131|ref|YP_003709268.1|	-	1.3e-10	41.2	0.0	1.6e-10	40.9	0.0	1.1	1	0	0	1	1	1	1	SnoaL-like	polyketide	cyclase
SnoaL_2	PF12680.7	gi|297621131|ref|YP_003709268.1|	-	5e-07	30.3	0.0	5.9e-07	30.1	0.0	1.1	1	0	0	1	1	1	1	SnoaL-like	domain
DUF4440	PF14534.6	gi|297621131|ref|YP_003709268.1|	-	0.0082	16.5	0.0	0.011	16.2	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4440)
DUF4897	PF16238.5	gi|297621131|ref|YP_003709268.1|	-	0.032	14.1	0.0	0.039	13.8	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4897)
Nepo_coat_C	PF03688.14	gi|297621131|ref|YP_003709268.1|	-	0.12	12.2	0.0	0.2	11.5	0.0	1.4	1	1	0	1	1	1	0	Nepovirus	coat	protein,	C-terminal	domain
PolyA_pol	PF01743.20	gi|297621132|ref|YP_003709269.1|	-	1.2e-06	29.0	0.0	0.0013	19.2	0.0	2.5	2	0	0	2	2	2	2	Poly	A	polymerase	head	domain
GDPD	PF03009.17	gi|297621133|ref|YP_003709270.1|	-	4.5e-36	124.9	0.0	1.2e-35	123.5	0.0	1.6	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
GDPD_2	PF13653.6	gi|297621133|ref|YP_003709270.1|	-	0.00015	22.1	0.3	0.00027	21.3	0.3	1.5	1	0	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
DUF4910	PF16254.5	gi|297621133|ref|YP_003709270.1|	-	0.048	12.5	0.0	0.069	12.0	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4910)
DAO	PF01266.24	gi|297621134|ref|YP_003709271.1|	-	3.6e-48	164.9	0.0	5e-48	164.5	0.0	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
DAO_C	PF16901.5	gi|297621134|ref|YP_003709271.1|	-	7.8e-26	90.4	0.0	2e-25	89.1	0.0	1.6	2	0	0	2	2	2	1	C-terminal	domain	of	alpha-glycerophosphate	oxidase
Pyr_redox_2	PF07992.14	gi|297621134|ref|YP_003709271.1|	-	0.002	17.5	0.0	0.0032	16.8	0.0	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|297621134|ref|YP_003709271.1|	-	0.011	14.5	0.5	0.016	13.9	0.5	1.2	1	0	0	1	1	1	0	HI0933-like	protein
3HCDH_N	PF02737.18	gi|297621134|ref|YP_003709271.1|	-	0.014	15.3	0.1	0.024	14.5	0.1	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.6	gi|297621134|ref|YP_003709271.1|	-	0.044	14.0	0.9	0.16	12.2	0.7	1.9	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.22	gi|297621134|ref|YP_003709271.1|	-	0.073	12.1	0.1	0.13	11.3	0.1	1.4	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
Synaptobrevin	PF00957.21	gi|297621134|ref|YP_003709271.1|	-	0.11	12.3	0.0	0.24	11.2	0.0	1.5	1	0	0	1	1	1	0	Synaptobrevin
Pyr_redox_3	PF13738.6	gi|297621134|ref|YP_003709271.1|	-	0.13	11.4	0.0	0.21	10.8	0.0	1.2	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|297621134|ref|YP_003709271.1|	-	0.44	9.6	2.4	0.67	9.0	2.4	1.2	1	0	0	1	1	1	0	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|297621134|ref|YP_003709271.1|	-	1.4	8.2	3.4	2.1	7.6	3.4	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
AI-2E_transport	PF01594.16	gi|297621135|ref|YP_003709272.1|	-	1.3e-46	159.3	39.2	1.7e-46	158.9	39.2	1.1	1	0	0	1	1	1	1	AI-2E	family	transporter
CxxCxxCC	PF03692.15	gi|297621136|ref|YP_003709273.1|	-	1.1e-14	54.9	3.4	1.5e-14	54.5	3.4	1.2	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
Ald_Xan_dh_C2	PF02738.18	gi|297621136|ref|YP_003709273.1|	-	0.14	10.5	0.0	0.18	10.2	0.0	1.1	1	0	0	1	1	1	0	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Glyco_transf_92	PF01697.27	gi|297621137|ref|YP_003709274.1|	-	1.5e-34	119.9	5.3	1.8e-34	119.6	5.3	1.1	1	0	0	1	1	1	1	Glycosyltransferase	family	92
Glyco_tranf_2_4	PF13704.6	gi|297621137|ref|YP_003709274.1|	-	7.1e-17	61.7	0.1	1.2e-16	61.0	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glycos_transf_2	PF00535.26	gi|297621137|ref|YP_003709274.1|	-	0.094	12.5	0.0	0.75	9.6	0.1	2.3	1	1	1	2	2	2	0	Glycosyl	transferase	family	2
Peptidase_M78	PF06114.13	gi|297621138|ref|YP_003709275.1|	-	2.2e-06	27.6	0.0	3.4e-06	27.0	0.0	1.3	1	0	0	1	1	1	1	IrrE	N-terminal-like	domain
PS_Dcarbxylase	PF02666.15	gi|297621139|ref|YP_003709276.1|	-	6.8e-10	38.8	0.8	5e-08	32.7	0.8	3.0	1	1	0	1	1	1	1	Phosphatidylserine	decarboxylase
Phage_Mu_Gam	PF07352.12	gi|297621139|ref|YP_003709276.1|	-	4.3e-05	23.5	0.7	0.00027	20.9	0.7	2.5	1	0	0	1	1	1	1	Bacteriophage	Mu	Gam	like	protein
LINES_N	PF14694.6	gi|297621139|ref|YP_003709276.1|	-	0.00079	19.0	0.2	0.0019	17.7	0.2	1.6	1	0	0	1	1	1	1	Lines	N-terminus
Aida_N	PF08910.10	gi|297621139|ref|YP_003709276.1|	-	0.65	10.4	6.1	0.31	11.5	1.3	2.6	2	0	0	2	2	2	0	Aida	N-terminus
RNA_pol_Rpb4	PF03874.16	gi|297621139|ref|YP_003709276.1|	-	3.8	7.9	10.4	4.5	7.6	0.6	4.0	4	0	0	4	4	4	0	RNA	polymerase	Rpb4
YXWGXW	PF12779.7	gi|297621140|ref|YP_003709277.1|	-	0.0087	16.2	7.5	0.0087	16.2	7.5	8.2	6	2	1	7	7	7	4	YXWGXW	repeat	(2	copies)
UvrC_HhH_N	PF08459.11	gi|297621141|ref|YP_003709278.1|	-	6.8e-50	169.0	0.1	1.6e-49	167.7	0.1	1.7	1	0	0	1	1	1	1	UvrC	Helix-hairpin-helix	N-terminal
GIY-YIG	PF01541.24	gi|297621141|ref|YP_003709278.1|	-	5e-13	49.1	0.0	1.3e-12	47.8	0.0	1.7	1	0	0	1	1	1	1	GIY-YIG	catalytic	domain
HHH_5	PF14520.6	gi|297621141|ref|YP_003709278.1|	-	2.6e-10	40.8	0.5	8.4e-10	39.1	0.5	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|297621141|ref|YP_003709278.1|	-	3.3e-08	33.5	0.0	7.6e-08	32.3	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|297621141|ref|YP_003709278.1|	-	8.2e-07	28.6	0.2	2.5e-05	23.9	0.1	2.5	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
UVR	PF02151.19	gi|297621141|ref|YP_003709278.1|	-	1.1e-06	28.2	1.2	3.4e-06	26.6	1.2	1.9	1	0	0	1	1	1	1	UvrB/uvrC	motif
5_3_exonuc	PF01367.20	gi|297621141|ref|YP_003709278.1|	-	0.25	12.0	1.1	1.1	9.9	0.1	2.5	3	0	0	3	3	3	0	5'-3'	exonuclease,	C-terminal	SAM	fold
DUF5624	PF18538.1	gi|297621142|ref|YP_003709279.1|	-	0.084	13.0	0.0	0.18	11.9	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5624)
HGTP_anticodon	PF03129.20	gi|297621143|ref|YP_003709280.1|	-	2e-13	50.3	0.4	4.1e-13	49.3	0.4	1.6	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA_SAD	PF07973.14	gi|297621143|ref|YP_003709280.1|	-	0.037	14.1	0.0	0.083	13.0	0.0	1.6	1	0	0	1	1	1	0	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
TIR_2	PF13676.6	gi|297621143|ref|YP_003709280.1|	-	0.081	13.5	0.0	0.53	10.9	0.0	2.2	2	0	0	2	2	2	0	TIR	domain
IF3_C	PF00707.22	gi|297621144|ref|YP_003709281.1|	-	2.2e-35	120.5	1.9	3.1e-35	120.0	1.9	1.2	1	0	0	1	1	1	1	Translation	initiation	factor	IF-3,	C-terminal	domain
IF3_N	PF05198.16	gi|297621144|ref|YP_003709281.1|	-	1e-33	115.4	0.3	2.7e-33	114.0	0.1	1.8	2	0	0	2	2	2	1	Translation	initiation	factor	IF-3,	N-terminal	domain
mIF3	PF14877.6	gi|297621144|ref|YP_003709281.1|	-	0.0062	16.2	4.4	0.013	15.2	4.3	1.6	1	1	1	2	2	2	1	Mitochondrial	translation	initiation	factor
Ribosomal_L35p	PF01632.19	gi|297621145|ref|YP_003709282.1|	-	1.2e-21	76.9	8.9	1.4e-21	76.8	8.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L35
Ribosomal_L20	PF00453.18	gi|297621146|ref|YP_003709283.1|	-	3.3e-41	139.7	6.6	3.7e-41	139.5	6.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L20
Ets	PF00178.22	gi|297621146|ref|YP_003709283.1|	-	0.03	14.8	0.8	0.11	13.0	0.3	1.9	1	1	1	2	2	2	0	Ets-domain
tRNA-synt_2d	PF01409.20	gi|297621147|ref|YP_003709284.1|	-	1.1e-94	316.5	0.0	1.4e-94	316.2	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
Phe_tRNA-synt_N	PF02912.18	gi|297621147|ref|YP_003709284.1|	-	1.5e-19	69.7	0.4	3.1e-19	68.7	0.4	1.6	1	0	0	1	1	1	1	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
PseudoU_synth_2	PF00849.22	gi|297621148|ref|YP_003709285.1|	-	3e-24	85.9	0.0	3.6e-22	79.2	0.0	2.2	2	0	0	2	2	2	2	RNA	pseudouridylate	synthase
S4	PF01479.25	gi|297621148|ref|YP_003709285.1|	-	0.00012	21.7	0.1	0.00021	20.9	0.1	1.4	1	0	0	1	1	1	1	S4	domain
S4_2	PF13275.6	gi|297621148|ref|YP_003709285.1|	-	0.00037	20.3	0.1	0.0011	18.7	0.0	1.8	2	0	0	2	2	2	1	S4	domain
U6-snRNA_bdg	PF10596.9	gi|297621148|ref|YP_003709285.1|	-	0.086	12.8	0.0	0.16	11.9	0.0	1.4	1	0	0	1	1	1	0	U6-snRNA	interacting	domain	of	PrP8
Glyco_transf_9	PF01075.17	gi|297621149|ref|YP_003709286.1|	-	9.1e-24	84.1	0.0	1.1e-23	83.8	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	family	9	(heptosyltransferase)
Topoisom_bac	PF01131.20	gi|297621150|ref|YP_003709287.1|	-	1.7e-113	379.8	1.9	2.1e-113	379.5	1.9	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.22	gi|297621150|ref|YP_003709287.1|	-	8.9e-17	61.2	0.0	3.3e-16	59.4	0.0	2.0	2	0	0	2	2	2	1	Toprim	domain
Toprim_Crpt	PF13342.6	gi|297621150|ref|YP_003709287.1|	-	0.0082	16.1	1.2	0.051	13.5	0.0	2.8	3	0	0	3	3	3	1	C-terminal	repeat	of	topoisomerase
SBP_bac_8	PF13416.6	gi|297621151|ref|YP_003709288.1|	-	1.5e-21	77.5	0.0	1.8e-21	77.2	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.6	gi|297621151|ref|YP_003709288.1|	-	1.5e-19	70.4	0.0	1.8e-19	70.1	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.25	gi|297621151|ref|YP_003709288.1|	-	3.5e-12	46.9	0.0	6.2e-12	46.1	0.0	1.4	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.6	gi|297621151|ref|YP_003709288.1|	-	0.00018	21.3	0.0	0.00029	20.6	0.0	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
DUF5446	PF17522.2	gi|297621151|ref|YP_003709288.1|	-	0.13	12.4	0.0	0.37	11.0	0.0	1.8	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5446)
BPD_transp_1	PF00528.22	gi|297621152|ref|YP_003709289.1|	-	1e-19	71.0	16.7	1e-19	71.0	16.7	2.1	2	0	0	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|297621153|ref|YP_003709290.1|	-	3.2e-06	27.0	32.5	0.0003	20.6	32.5	2.2	1	1	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.27	gi|297621154|ref|YP_003709291.1|	-	1.9e-37	128.8	0.0	3.4e-37	128.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
TOBE_2	PF08402.10	gi|297621154|ref|YP_003709291.1|	-	5.7e-11	42.4	0.0	1e-10	41.6	0.0	1.5	1	0	0	1	1	1	1	TOBE	domain
AAA_21	PF13304.6	gi|297621154|ref|YP_003709291.1|	-	3.7e-07	30.2	1.7	0.0067	16.3	0.2	2.3	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|297621154|ref|YP_003709291.1|	-	0.00047	19.7	0.7	0.0019	17.7	0.7	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|297621154|ref|YP_003709291.1|	-	0.00052	20.3	0.9	0.0065	16.7	0.9	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|297621154|ref|YP_003709291.1|	-	0.0031	17.9	0.0	0.0047	17.3	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|297621154|ref|YP_003709291.1|	-	0.0053	16.7	0.0	0.011	15.7	0.0	1.5	1	0	0	1	1	1	1	RsgA	GTPase
Rad17	PF03215.15	gi|297621154|ref|YP_003709291.1|	-	0.01	15.7	0.0	0.017	15.1	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_23	PF13476.6	gi|297621154|ref|YP_003709291.1|	-	0.011	16.3	1.4	0.017	15.6	1.4	1.6	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|297621154|ref|YP_003709291.1|	-	0.014	15.8	0.6	0.13	12.7	0.6	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.6	gi|297621154|ref|YP_003709291.1|	-	0.028	14.7	0.0	0.061	13.6	0.0	1.6	2	0	0	2	2	1	0	AAA	domain
AAA_29	PF13555.6	gi|297621154|ref|YP_003709291.1|	-	0.029	14.1	0.0	0.066	13.0	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
PhoH	PF02562.16	gi|297621154|ref|YP_003709291.1|	-	0.039	13.4	0.0	2.1	7.7	0.0	2.2	2	0	0	2	2	2	0	PhoH-like	protein
AAA_18	PF13238.6	gi|297621154|ref|YP_003709291.1|	-	0.047	14.2	1.5	0.21	12.1	0.1	2.6	3	1	0	3	3	3	0	AAA	domain
ATPase_2	PF01637.18	gi|297621154|ref|YP_003709291.1|	-	0.05	13.5	0.1	0.097	12.6	0.1	1.7	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_14	PF13173.6	gi|297621154|ref|YP_003709291.1|	-	0.059	13.4	0.0	0.18	11.9	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
ABC_ATPase	PF09818.9	gi|297621154|ref|YP_003709291.1|	-	0.088	11.6	0.1	1.9	7.2	0.0	2.6	2	1	1	3	3	3	0	Predicted	ATPase	of	the	ABC	class
NB-ARC	PF00931.22	gi|297621154|ref|YP_003709291.1|	-	0.13	11.4	0.4	1.1	8.4	0.0	2.2	2	0	0	2	2	2	0	NB-ARC	domain
IstB_IS21	PF01695.17	gi|297621154|ref|YP_003709291.1|	-	0.14	11.9	0.1	0.48	10.1	0.0	1.8	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Radical_SAM	PF04055.21	gi|297621155|ref|YP_003709292.1|	-	2.3e-18	67.1	0.0	3e-18	66.7	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|297621155|ref|YP_003709292.1|	-	1.1e-05	25.5	0.0	3.7e-05	23.8	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
AAA_26	PF13500.6	gi|297621156|ref|YP_003709293.1|	-	2.1e-42	145.2	0.0	1.8e-41	142.2	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
DRTGG	PF07085.12	gi|297621156|ref|YP_003709293.1|	-	7.9e-12	44.9	0.0	1.5e-11	44.0	0.0	1.4	1	0	0	1	1	1	1	DRTGG	domain
CbiA	PF01656.23	gi|297621156|ref|YP_003709293.1|	-	0.002	18.2	0.1	0.012	15.7	0.1	2.1	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Gly_reductase	PF09338.11	gi|297621156|ref|YP_003709293.1|	-	0.037	12.4	0.1	0.054	11.9	0.1	1.1	1	0	0	1	1	1	0	Glycine/sarcosine/betaine	reductase	component	B	subunits
NUDIX	PF00293.28	gi|297621157|ref|YP_003709294.1|	-	2.9e-18	66.2	0.4	4.4e-18	65.6	0.4	1.2	1	0	0	1	1	1	1	NUDIX	domain
Imm32	PF15566.6	gi|297621159|ref|YP_003709296.1|	-	1e-26	92.5	0.8	1.3e-26	92.1	0.8	1.2	1	0	0	1	1	1	1	Immunity	protein	32
Ferritin	PF00210.24	gi|297621162|ref|YP_003709299.1|	-	2.8e-28	98.6	5.4	3.3e-28	98.4	5.4	1.0	1	0	0	1	1	1	1	Ferritin-like	domain
DUF4795	PF16043.5	gi|297621162|ref|YP_003709299.1|	-	0.027	14.1	2.4	0.041	13.5	2.4	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
DUF87	PF01935.17	gi|297621162|ref|YP_003709299.1|	-	0.05	13.7	2.2	0.061	13.4	2.2	1.1	1	0	0	1	1	1	0	Helicase	HerA,	central	domain
Cullin_Nedd8	PF10557.9	gi|297621162|ref|YP_003709299.1|	-	0.065	13.3	1.1	3.1	7.9	0.3	2.8	1	1	1	2	2	2	0	Cullin	protein	neddylation	domain
PhoU	PF01895.19	gi|297621162|ref|YP_003709299.1|	-	0.11	12.9	6.0	0.19	12.2	3.6	2.3	2	1	0	2	2	2	0	PhoU	domain
bZIP_1	PF00170.21	gi|297621162|ref|YP_003709299.1|	-	0.16	12.1	1.5	21	5.3	0.1	2.7	2	0	0	2	2	2	0	bZIP	transcription	factor
NYD-SP28	PF14772.6	gi|297621162|ref|YP_003709299.1|	-	0.25	11.4	4.2	0.69	10.0	4.3	1.8	1	1	0	1	1	1	0	Sperm	tail
DASH_Dad3	PF08656.10	gi|297621162|ref|YP_003709299.1|	-	0.35	11.0	4.2	26	5.0	4.2	2.4	1	1	0	1	1	1	0	DASH	complex	subunit	Dad3
Tropomyosin_1	PF12718.7	gi|297621162|ref|YP_003709299.1|	-	0.95	9.6	6.8	5.7	7.1	5.9	2.0	1	1	1	2	2	2	0	Tropomyosin	like
Fib_alpha	PF08702.10	gi|297621162|ref|YP_003709299.1|	-	1.3	9.2	6.0	1.5	9.0	1.2	2.0	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Methyltransf_11	PF08241.12	gi|297621163|ref|YP_003709300.1|	-	2.2e-07	31.4	0.0	4.7e-07	30.4	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297621163|ref|YP_003709300.1|	-	9.6e-05	22.3	0.0	0.00017	21.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297621163|ref|YP_003709300.1|	-	0.002	18.8	0.0	0.0047	17.6	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297621163|ref|YP_003709300.1|	-	0.005	17.5	0.0	0.0097	16.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_9	PF08003.11	gi|297621163|ref|YP_003709300.1|	-	0.017	14.1	0.3	0.043	12.7	0.0	1.7	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1698)
MecA_N	PF05223.11	gi|297621163|ref|YP_003709300.1|	-	0.051	13.8	0.0	0.089	13.1	0.0	1.4	1	0	0	1	1	1	0	NTF2-like	N-terminal	transpeptidase	domain
ParBc	PF02195.18	gi|297621163|ref|YP_003709300.1|	-	0.064	13.5	0.0	0.12	12.6	0.0	1.4	1	0	0	1	1	1	0	ParB-like	nuclease	domain
Methyltransf_31	PF13847.6	gi|297621163|ref|YP_003709300.1|	-	0.098	12.5	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297621164|ref|YP_003709301.1|	-	4.9e-10	39.9	0.0	8.6e-10	39.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297621164|ref|YP_003709301.1|	-	1.7e-07	31.9	0.0	3.6e-07	30.8	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297621164|ref|YP_003709301.1|	-	2.4e-06	27.5	0.0	3.4e-06	27.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|297621164|ref|YP_003709301.1|	-	0.00011	22.0	0.1	0.00078	19.3	0.1	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|297621164|ref|YP_003709301.1|	-	0.0004	19.8	0.0	0.00061	19.2	0.0	1.3	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_12	PF08242.12	gi|297621164|ref|YP_003709301.1|	-	0.0059	17.3	0.0	0.013	16.2	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.6	gi|297621164|ref|YP_003709301.1|	-	0.0088	16.0	0.0	0.018	15.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Asn_synthase	PF00733.21	gi|297621165|ref|YP_003709302.1|	-	1.4e-50	172.9	0.0	2.2e-50	172.3	0.0	1.3	1	0	0	1	1	1	1	Asparagine	synthase
GATase_7	PF13537.6	gi|297621165|ref|YP_003709302.1|	-	2e-23	82.6	0.0	4.9e-23	81.4	0.0	1.6	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.6	gi|297621165|ref|YP_003709302.1|	-	2.2e-14	53.8	0.0	5e-14	52.6	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
DUF3700	PF12481.8	gi|297621165|ref|YP_003709302.1|	-	1.1e-07	31.6	0.0	2e-07	30.7	0.0	1.3	1	0	0	1	1	1	1	Aluminium	induced	protein
NAD_synthase	PF02540.17	gi|297621165|ref|YP_003709302.1|	-	0.049	12.7	0.0	0.088	11.9	0.0	1.4	1	0	0	1	1	1	0	NAD	synthase
LexA_DNA_bind	PF01726.16	gi|297621165|ref|YP_003709302.1|	-	0.17	11.6	0.3	0.67	9.8	0.1	2.1	3	0	0	3	3	3	0	LexA	DNA	binding	domain
T6SS_HCP	PF05638.12	gi|297621166|ref|YP_003709303.1|	-	3.6e-19	69.4	0.0	4.5e-19	69.1	0.0	1.1	1	0	0	1	1	1	1	Type	VI	secretion	system	effector,	Hcp
Phage_gp53	PF11246.8	gi|297621166|ref|YP_003709303.1|	-	0.14	11.8	0.0	0.19	11.4	0.0	1.2	1	0	0	1	1	1	0	Base	plate	wedge	protein	53
Lactamase_B	PF00753.27	gi|297621167|ref|YP_003709304.1|	-	1e-16	61.5	4.6	5.7e-16	59.1	4.6	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|297621167|ref|YP_003709304.1|	-	0.00053	19.6	0.2	0.00081	19.0	0.2	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Legionella_OMP	PF05150.12	gi|297621168|ref|YP_003709305.1|	-	4.4e-25	88.2	0.0	5.2e-25	87.9	0.0	1.0	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
Legionella_OMP	PF05150.12	gi|297621169|ref|YP_003709306.1|	-	4.6e-16	58.6	0.1	5.8e-16	58.3	0.1	1.1	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
DUF5315	PF17242.2	gi|297621171|ref|YP_003709308.1|	-	0.022	14.6	0.4	0.26	11.1	0.1	2.2	2	0	0	2	2	2	0	Disordered	region	of	unknown	function	(DUF5315)
ETRAMP	PF09716.10	gi|297621171|ref|YP_003709308.1|	-	6.9	6.8	7.3	0.66	10.1	0.3	2.4	2	1	0	2	2	2	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
RHS_repeat	PF05593.14	gi|297621173|ref|YP_003709310.1|	-	1.3e-35	121.4	46.3	0.00057	20.3	0.0	22.1	17	7	8	25	25	25	14	RHS	Repeat
DUF4854	PF16146.5	gi|297621173|ref|YP_003709310.1|	-	0.51	10.7	8.1	17	5.8	0.1	4.9	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4854)
His_Phos_1	PF00300.22	gi|297621174|ref|YP_003709311.1|	-	5.8e-10	39.2	0.1	2.8e-08	33.7	0.0	2.1	2	0	0	2	2	2	2	Histidine	phosphatase	superfamily	(branch	1)
adh_short	PF00106.25	gi|297621175|ref|YP_003709312.1|	-	1.7e-47	161.5	0.1	2.6e-47	160.8	0.1	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|297621175|ref|YP_003709312.1|	-	4.3e-35	121.4	0.0	6.3e-35	120.8	0.0	1.3	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.10	gi|297621175|ref|YP_003709312.1|	-	2.1e-10	40.8	0.4	4.3e-09	36.5	0.4	2.1	1	1	0	1	1	1	1	KR	domain
DUF1776	PF08643.10	gi|297621175|ref|YP_003709312.1|	-	4.8e-09	36.0	0.0	8.8e-08	31.9	0.0	2.1	1	1	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
NAD_binding_10	PF13460.6	gi|297621175|ref|YP_003709312.1|	-	1.7e-06	28.1	0.1	3.7e-06	26.9	0.1	1.7	1	1	0	1	1	1	1	NAD(P)H-binding
Epimerase	PF01370.21	gi|297621175|ref|YP_003709312.1|	-	1.8e-05	24.4	0.0	2.7e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.17	gi|297621175|ref|YP_003709312.1|	-	0.0019	17.4	0.0	0.003	16.7	0.0	1.3	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Glu_dehyd_C	PF16912.5	gi|297621175|ref|YP_003709312.1|	-	0.017	14.6	0.1	0.023	14.2	0.1	1.3	1	0	0	1	1	1	0	Glucose	dehydrogenase	C-terminus
ApbA	PF02558.16	gi|297621175|ref|YP_003709312.1|	-	0.018	14.7	0.0	0.029	14.0	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
AAT	PF03417.16	gi|297621175|ref|YP_003709312.1|	-	0.18	11.5	0.0	0.27	10.9	0.0	1.2	1	0	0	1	1	1	0	Acyl-coenzyme	A:6-aminopenicillanic	acid	acyl-transferase
CPBP	PF02517.16	gi|297621176|ref|YP_003709313.1|	-	3.5e-19	68.9	7.2	3.5e-19	68.9	7.2	2.1	2	1	0	2	2	2	1	CPBP	intramembrane	metalloprotease
DUF2198	PF09964.9	gi|297621176|ref|YP_003709313.1|	-	0.096	12.8	0.5	0.096	12.8	0.5	2.4	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2198)
PP2C_2	PF13672.6	gi|297621177|ref|YP_003709314.1|	-	2.9e-17	63.0	0.0	4.1e-17	62.5	0.0	1.1	1	0	0	1	1	1	1	Protein	phosphatase	2C
PP2C	PF00481.21	gi|297621177|ref|YP_003709314.1|	-	7.2e-11	42.2	0.1	3.5e-08	33.4	0.0	2.1	2	0	0	2	2	2	2	Protein	phosphatase	2C
SpoIIE	PF07228.12	gi|297621177|ref|YP_003709314.1|	-	2.5e-08	34.1	0.0	1.7e-07	31.3	0.0	2.0	1	1	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
Aminotran_5	PF00266.19	gi|297621178|ref|YP_003709315.1|	-	3.7e-60	203.8	0.0	4.9e-60	203.4	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|297621178|ref|YP_003709315.1|	-	7.8e-07	28.6	0.0	7.8e-06	25.3	0.0	2.1	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|297621178|ref|YP_003709315.1|	-	0.00018	20.2	0.1	0.00026	19.6	0.1	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|297621178|ref|YP_003709315.1|	-	0.0025	17.1	0.0	0.0049	16.2	0.0	1.4	1	1	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.17	gi|297621178|ref|YP_003709315.1|	-	0.0026	17.1	0.0	0.0037	16.6	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
DUF21	PF01595.20	gi|297621179|ref|YP_003709316.1|	-	4.5e-27	94.9	1.1	7e-27	94.3	1.1	1.3	1	0	0	1	1	1	1	Cyclin	M	transmembrane	N-terminal	domain
CorC_HlyC	PF03471.17	gi|297621179|ref|YP_003709316.1|	-	2.2e-06	27.6	0.1	5.4e-06	26.3	0.1	1.6	1	0	0	1	1	1	1	Transporter	associated	domain
CBS	PF00571.28	gi|297621179|ref|YP_003709316.1|	-	7.4e-06	26.3	0.0	4.9e-05	23.7	0.0	2.4	2	0	0	2	2	2	1	CBS	domain
BicD	PF09730.9	gi|297621179|ref|YP_003709316.1|	-	0.0062	15.0	0.2	0.0099	14.4	0.2	1.2	1	0	0	1	1	1	1	Microtubule-associated	protein	Bicaudal-D
DUF21	PF01595.20	gi|297621180|ref|YP_003709317.1|	-	3.6e-34	118.0	1.0	5.8e-34	117.3	1.0	1.3	1	0	0	1	1	1	1	Cyclin	M	transmembrane	N-terminal	domain
CorC_HlyC	PF03471.17	gi|297621180|ref|YP_003709317.1|	-	4.4e-14	52.2	0.0	2.2e-13	50.0	0.0	2.1	1	1	2	3	3	3	1	Transporter	associated	domain
CBS	PF00571.28	gi|297621180|ref|YP_003709317.1|	-	1.2e-10	41.6	0.1	8e-06	26.2	0.0	2.7	2	0	0	2	2	2	2	CBS	domain
NUDIX	PF00293.28	gi|297621182|ref|YP_003709319.1|	-	1.1e-15	57.9	0.0	1.5e-15	57.4	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_2	PF13869.6	gi|297621182|ref|YP_003709319.1|	-	0.13	11.8	0.0	0.17	11.4	0.0	1.2	1	0	0	1	1	1	0	Nucleotide	hydrolase
Peptidase_M16_C	PF05193.21	gi|297621183|ref|YP_003709320.1|	-	3.7e-13	49.9	0.1	8.6e-13	48.7	0.0	1.6	2	0	0	2	2	2	1	Peptidase	M16	inactive	domain
ABC_tran_CTD	PF16326.5	gi|297621184|ref|YP_003709321.1|	-	0.021	15.1	2.8	0.092	13.0	2.1	2.4	2	0	0	2	2	2	0	ABC	transporter	C-terminal	domain
Retrotrans_gag	PF03732.17	gi|297621184|ref|YP_003709321.1|	-	0.19	12.0	0.9	6.3	7.1	0.1	2.7	2	0	0	2	2	2	0	Retrotransposon	gag	protein
4HB_MCP_1	PF12729.7	gi|297621184|ref|YP_003709321.1|	-	2.9	7.4	10.0	0.37	10.3	2.2	2.8	2	1	0	3	3	3	0	Four	helix	bundle	sensory	module	for	signal	transduction
MAD	PF05557.13	gi|297621185|ref|YP_003709322.1|	-	0.00056	18.4	38.2	0.00056	18.4	38.2	4.4	1	1	2	4	4	3	3	Mitotic	checkpoint	protein
KLRAQ	PF10205.9	gi|297621185|ref|YP_003709322.1|	-	0.0024	18.1	5.7	0.0024	18.1	5.7	9.6	3	2	6	10	10	8	1	Predicted	coiled-coil	domain-containing	protein
FPP	PF05911.11	gi|297621185|ref|YP_003709322.1|	-	0.0031	15.8	9.5	0.0031	15.8	9.5	5.4	1	1	5	6	6	5	2	Filament-like	plant	protein,	long	coiled-coil
HMMR_N	PF15905.5	gi|297621185|ref|YP_003709322.1|	-	0.0042	16.6	29.6	0.0042	16.6	29.6	5.5	1	1	3	5	5	3	1	Hyaluronan	mediated	motility	receptor	N-terminal
DUF4618	PF15397.6	gi|297621185|ref|YP_003709322.1|	-	0.006	16.0	24.9	0.006	16.0	24.9	7.1	2	1	4	6	6	5	2	Domain	of	unknown	function	(DUF4618)
LysM	PF01476.20	gi|297621185|ref|YP_003709322.1|	-	0.0099	15.9	2.2	0.011	15.8	0.3	2.2	2	0	0	2	2	2	1	LysM	domain
BLOC1_2	PF10046.9	gi|297621185|ref|YP_003709322.1|	-	0.058	13.7	0.4	0.058	13.7	0.4	10.1	2	1	7	9	9	8	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Fez1	PF06818.15	gi|297621185|ref|YP_003709322.1|	-	0.11	13.0	115.7	0.17	12.4	20.3	5.9	1	1	5	6	6	6	0	Fez1
DUF4407	PF14362.6	gi|297621185|ref|YP_003709322.1|	-	0.28	10.5	97.1	0.12	11.7	20.7	5.6	1	1	4	5	5	4	0	Domain	of	unknown	function	(DUF4407)
Spc7	PF08317.11	gi|297621185|ref|YP_003709322.1|	-	0.38	9.6	132.0	0.015	14.2	16.6	6.8	1	1	3	6	6	6	0	Spc7	kinetochore	protein
Pox_A_type_inc	PF04508.12	gi|297621185|ref|YP_003709322.1|	-	9.4	6.3	27.2	1.7	8.6	0.3	7.1	7	0	0	7	7	7	0	Viral	A-type	inclusion	protein	repeat
Thioredox_DsbH	PF03190.15	gi|297621186|ref|YP_003709323.1|	-	7.3e-69	230.9	0.1	1.2e-68	230.2	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.6	gi|297621186|ref|YP_003709323.1|	-	2.1e-08	34.2	0.0	5.3e-08	32.9	0.0	1.7	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.6	gi|297621186|ref|YP_003709323.1|	-	0.16	12.5	0.0	0.4	11.2	0.0	1.7	1	0	0	1	1	1	0	Thioredoxin-like	domain
TPR_17	PF13431.6	gi|297621187|ref|YP_003709324.1|	-	9.9e-14	50.7	9.2	0.0095	16.3	0.0	10.4	10	1	1	11	11	10	2	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|297621187|ref|YP_003709324.1|	-	6e-13	48.3	3.1	0.0054	16.4	0.0	7.6	8	1	1	9	9	9	2	TPR	repeat
TPR_16	PF13432.6	gi|297621187|ref|YP_003709324.1|	-	6.8e-10	39.4	1.3	0.0006	20.4	0.0	6.2	6	2	1	7	7	6	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297621187|ref|YP_003709324.1|	-	9.3e-09	35.5	20.7	0.0088	16.3	0.1	7.5	5	1	3	8	8	8	4	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|297621187|ref|YP_003709324.1|	-	1e-07	32.2	5.6	13	6.9	0.0	9.2	5	3	5	10	10	9	0	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297621187|ref|YP_003709324.1|	-	2.6e-07	31.0	3.5	1.7	9.2	0.0	7.0	8	0	0	8	8	8	2	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621187|ref|YP_003709324.1|	-	7.7e-07	28.8	26.0	0.78	10.1	0.2	11.4	10	2	0	10	10	10	1	Tetratricopeptide	repeat
TOM20_plant	PF06552.12	gi|297621187|ref|YP_003709324.1|	-	7.6e-06	25.8	4.0	0.0058	16.4	0.0	4.9	4	2	2	6	6	6	1	Plant	specific	mitochondrial	import	receptor	subunit	TOM20
TPR_10	PF13374.6	gi|297621187|ref|YP_003709324.1|	-	2.6e-05	23.9	11.3	0.16	11.9	0.0	7.5	8	0	0	8	8	8	1	Tetratricopeptide	repeat
TPR_MalT	PF17874.1	gi|297621187|ref|YP_003709324.1|	-	6.9e-05	22.4	2.5	7.2e-05	22.3	0.5	2.0	2	0	0	2	2	2	1	MalT-like	TPR	region
TPR_2	PF07719.17	gi|297621187|ref|YP_003709324.1|	-	0.0012	18.8	39.5	6.9	7.1	0.1	13.4	13	3	2	15	15	14	1	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|297621187|ref|YP_003709324.1|	-	0.0044	17.1	3.0	14	6.0	0.0	5.1	5	2	0	5	5	5	0	Tetratricopeptide	repeat
LidA_Long_CC	PF18641.1	gi|297621187|ref|YP_003709324.1|	-	0.026	14.6	0.6	0.067	13.3	0.6	1.7	1	0	0	1	1	1	0	LidA	long	coiled-coil	domain
NARP1	PF12569.8	gi|297621187|ref|YP_003709324.1|	-	0.031	13.2	0.1	0.073	12.0	0.0	1.6	2	0	0	2	2	2	0	NMDA	receptor-regulated	protein	1
Sel1	PF08238.12	gi|297621187|ref|YP_003709324.1|	-	0.18	12.5	4.7	7.3	7.4	0.0	4.6	4	0	0	4	4	4	0	Sel1	repeat
TPR_1	PF00515.28	gi|297621187|ref|YP_003709324.1|	-	1.3	9.0	0.0	1.3	9.0	0.0	11.7	13	2	1	14	14	14	0	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297621187|ref|YP_003709324.1|	-	1.3	9.3	10.6	17	5.7	0.7	4.8	5	1	0	5	5	5	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
MgtE	PF01769.16	gi|297621188|ref|YP_003709325.1|	-	4.1e-25	88.6	5.1	9.4e-25	87.4	5.1	1.6	1	0	0	1	1	1	1	Divalent	cation	transporter
MgtE_N	PF03448.17	gi|297621188|ref|YP_003709325.1|	-	2.3e-16	60.3	2.8	3.1e-16	59.8	0.9	2.1	2	0	0	2	2	2	1	MgtE	intracellular	N	domain
CBS	PF00571.28	gi|297621188|ref|YP_003709325.1|	-	3.5e-15	56.2	2.1	1.2e-08	35.3	1.1	2.8	2	0	0	2	2	2	2	CBS	domain
FlaG	PF03646.15	gi|297621188|ref|YP_003709325.1|	-	0.019	15.1	1.7	0.087	13.0	0.3	2.3	2	0	0	2	2	2	0	FlaG	protein
DOT1	PF08123.13	gi|297621189|ref|YP_003709326.1|	-	4.5e-07	29.6	0.0	6.8e-07	29.0	0.0	1.4	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_25	PF13649.6	gi|297621189|ref|YP_003709326.1|	-	4.5e-05	24.1	0.0	7.2e-05	23.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297621189|ref|YP_003709326.1|	-	0.00093	19.8	0.0	0.0015	19.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|297621189|ref|YP_003709326.1|	-	0.0012	18.7	0.0	0.0017	18.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297621189|ref|YP_003709326.1|	-	0.13	13.0	0.0	0.42	11.4	0.0	1.7	1	1	1	2	2	2	0	Methyltransferase	domain
4HB_MCP_1	PF12729.7	gi|297621190|ref|YP_003709327.1|	-	0.74	9.3	3.4	2.5	7.6	0.6	2.7	2	1	1	3	3	3	0	Four	helix	bundle	sensory	module	for	signal	transduction
SseC	PF04888.12	gi|297621191|ref|YP_003709328.1|	-	0.11	12.0	9.6	0.39	10.3	2.4	2.1	1	1	1	2	2	2	0	Secretion	system	effector	C	(SseC)	like	family
TPR_3	PF07720.12	gi|297621192|ref|YP_003709329.1|	-	1.9e-13	50.1	3.1	2.7e-06	27.3	0.0	2.8	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297621192|ref|YP_003709329.1|	-	8.8e-07	28.6	4.1	0.016	15.3	0.0	3.5	3	0	0	3	3	3	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297621192|ref|YP_003709329.1|	-	1.2e-05	25.4	0.5	0.00073	19.7	0.1	2.2	1	1	1	2	2	2	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_16	PF13432.6	gi|297621192|ref|YP_003709329.1|	-	2.1e-05	25.1	1.0	0.0015	19.2	1.5	2.4	2	1	1	3	3	2	1	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297621192|ref|YP_003709329.1|	-	0.00011	21.8	3.3	0.029	14.2	0.0	3.3	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297621192|ref|YP_003709329.1|	-	0.00024	21.3	0.4	0.66	10.3	0.1	3.1	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297621192|ref|YP_003709329.1|	-	0.00027	21.4	0.1	0.00044	20.7	0.1	1.4	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|297621192|ref|YP_003709329.1|	-	0.0091	16.7	1.6	0.4	11.6	0.3	3.1	2	1	1	3	3	3	1	Tetratricopeptide	repeat
zf-CCHC_5	PF14787.6	gi|297621192|ref|YP_003709329.1|	-	0.053	13.2	0.0	5.7	6.7	0.0	2.6	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
TPR_6	PF13174.6	gi|297621192|ref|YP_003709329.1|	-	0.077	13.7	0.5	3.1	8.6	0.0	3.2	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|297621192|ref|YP_003709329.1|	-	0.088	13.0	0.0	2.8	8.2	0.0	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|297621192|ref|YP_003709329.1|	-	0.13	12.4	0.1	3.5	7.9	0.0	3.0	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621192|ref|YP_003709329.1|	-	0.19	12.0	2.1	6	7.3	0.0	3.1	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Anoct_dimer	PF16178.5	gi|297621193|ref|YP_003709330.1|	-	0.005	16.6	2.0	0.0059	16.3	2.0	1.1	1	0	0	1	1	1	1	Dimerisation	domain	of	Ca+-activated	chloride-channel,	anoctamin
VPS11_C	PF12451.8	gi|297621193|ref|YP_003709330.1|	-	0.026	14.7	0.6	0.1	12.9	0.6	2.0	1	0	0	1	1	1	0	Vacuolar	protein	sorting	protein	11	C	terminal
Rx_N	PF18052.1	gi|297621193|ref|YP_003709330.1|	-	0.03	14.6	6.1	0.044	14.1	5.2	1.7	1	1	0	1	1	1	0	Rx	N-terminal	domain
LYTB	PF02401.18	gi|297621193|ref|YP_003709330.1|	-	0.11	11.7	3.5	0.18	11.0	3.3	1.5	1	1	0	1	1	1	0	LytB	protein
DUF2431	PF10354.9	gi|297621193|ref|YP_003709330.1|	-	0.12	12.6	0.5	0.31	11.3	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2431)
DUF4032	PF13224.6	gi|297621193|ref|YP_003709330.1|	-	0.15	11.9	4.4	0.096	12.6	1.9	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4032)
DUF533	PF04391.12	gi|297621193|ref|YP_003709330.1|	-	0.32	10.5	4.3	0.12	11.9	1.2	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF533)
Cas6b_C	PF17262.2	gi|297621193|ref|YP_003709330.1|	-	0.88	9.7	4.7	0.5	10.5	2.0	1.9	1	1	1	2	2	2	0	Cas6b	C-terminal	domain
ISG65-75	PF11727.8	gi|297621193|ref|YP_003709330.1|	-	0.92	8.7	9.1	0.81	8.9	7.8	1.5	1	1	0	1	1	1	0	Invariant	surface	glycoprotein
Noelin-1	PF12308.8	gi|297621193|ref|YP_003709330.1|	-	3.1	7.8	6.6	0.56	10.2	1.1	2.1	1	1	0	2	2	2	0	Neurogenesis	glycoprotein
TMPIT	PF07851.13	gi|297621193|ref|YP_003709330.1|	-	5.9	6.0	9.2	8.9	5.5	9.2	1.4	1	1	0	1	1	1	0	TMPIT-like	protein
SNF	PF00209.18	gi|297621194|ref|YP_003709331.1|	-	4.2e-68	230.3	33.4	1.1e-40	139.9	16.6	2.1	2	0	0	2	2	2	2	Sodium:neurotransmitter	symporter	family
RuvB_N	PF05496.12	gi|297621195|ref|YP_003709332.1|	-	4.2e-71	237.8	0.0	7.4e-71	237.0	0.0	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
RuvB_C	PF05491.13	gi|297621195|ref|YP_003709332.1|	-	4.1e-27	93.8	0.3	8.2e-27	92.9	0.3	1.5	1	0	0	1	1	1	1	RuvB	C-terminal	winged	helix	domain
AAA_lid_4	PF17864.1	gi|297621195|ref|YP_003709332.1|	-	6.9e-25	86.6	0.0	1.2e-24	85.8	0.0	1.4	1	0	0	1	1	1	1	RuvB	AAA	lid	domain
AAA	PF00004.29	gi|297621195|ref|YP_003709332.1|	-	2e-17	63.9	0.0	1.8e-16	60.8	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.14	gi|297621195|ref|YP_003709332.1|	-	1.5e-07	31.5	0.3	1.4e-05	25.1	0.3	2.3	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|297621195|ref|YP_003709332.1|	-	2.2e-05	24.9	0.1	0.00026	21.4	0.0	2.2	1	1	1	2	2	2	1	AAA	ATPase	domain
Mg_chelatase	PF01078.21	gi|297621195|ref|YP_003709332.1|	-	4.6e-05	22.9	0.0	0.037	13.4	0.0	2.3	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_22	PF13401.6	gi|297621195|ref|YP_003709332.1|	-	0.00056	20.2	0.1	0.19	12.0	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.6	gi|297621195|ref|YP_003709332.1|	-	0.0011	19.5	0.0	0.0026	18.3	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Sigma54_activat	PF00158.26	gi|297621195|ref|YP_003709332.1|	-	0.0037	17.0	0.0	3.2	7.4	0.0	2.3	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Rad17	PF03215.15	gi|297621195|ref|YP_003709332.1|	-	0.0038	17.2	0.0	0.0062	16.5	0.0	1.4	1	0	0	1	1	1	1	Rad17	P-loop	domain
AAA_3	PF07726.11	gi|297621195|ref|YP_003709332.1|	-	0.0049	16.7	0.0	0.026	14.4	0.0	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.6	gi|297621195|ref|YP_003709332.1|	-	0.0057	16.9	0.1	0.011	16.0	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
TIP49	PF06068.13	gi|297621195|ref|YP_003709332.1|	-	0.0084	15.3	0.0	0.24	10.5	0.0	2.1	2	0	0	2	2	2	1	TIP49	P-loop	domain
Sigma54_activ_2	PF14532.6	gi|297621195|ref|YP_003709332.1|	-	0.01	16.0	0.0	0.023	14.8	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
RNA_helicase	PF00910.22	gi|297621195|ref|YP_003709332.1|	-	0.014	15.8	0.0	0.031	14.7	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_17	PF13207.6	gi|297621195|ref|YP_003709332.1|	-	0.02	15.3	0.1	0.042	14.3	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.15	gi|297621195|ref|YP_003709332.1|	-	0.021	14.7	0.5	0.11	12.5	0.1	2.1	2	0	0	2	2	2	0	NTPase
TsaE	PF02367.17	gi|297621195|ref|YP_003709332.1|	-	0.022	14.7	0.0	0.045	13.7	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_33	PF13671.6	gi|297621195|ref|YP_003709332.1|	-	0.029	14.5	0.0	0.056	13.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|297621195|ref|YP_003709332.1|	-	0.064	13.0	0.1	0.42	10.3	0.0	2.2	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
MCM	PF00493.23	gi|297621195|ref|YP_003709332.1|	-	0.092	11.8	0.0	2.5	7.1	0.0	2.3	1	1	0	1	1	1	0	MCM	P-loop	domain
SpoIID	PF08486.10	gi|297621196|ref|YP_003709333.1|	-	2.1e-13	50.6	0.0	3.8e-13	49.8	0.0	1.3	1	0	0	1	1	1	1	Stage	II	sporulation	protein
Queuosine_synth	PF02547.15	gi|297621197|ref|YP_003709334.1|	-	1e-128	429.1	0.0	1.1e-128	428.9	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein
CesT	PF05932.13	gi|297621198|ref|YP_003709335.1|	-	2.4e-31	108.3	0.0	2.8e-31	108.1	0.0	1.0	1	0	0	1	1	1	1	Tir	chaperone	protein	(CesT)	family
TPR_7	PF13176.6	gi|297621199|ref|YP_003709336.1|	-	0.0094	15.9	0.5	0.092	12.8	0.0	2.8	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297621199|ref|YP_003709336.1|	-	0.039	14.2	1.3	0.72	10.2	0.0	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297621199|ref|YP_003709336.1|	-	0.045	14.4	1.8	21	6.1	0.0	3.0	3	0	0	3	3	3	0	Tetratricopeptide	repeat
AIF_C	PF14721.6	gi|297621199|ref|YP_003709336.1|	-	0.067	13.5	3.0	0.18	12.2	3.0	1.7	1	0	0	1	1	1	0	Apoptosis-inducing	factor,	mitochondrion-associated,	C-term
TPR_8	PF13181.6	gi|297621199|ref|YP_003709336.1|	-	0.07	13.4	2.9	0.66	10.3	0.0	2.8	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Toprim	PF01751.22	gi|297621199|ref|YP_003709336.1|	-	1.2	9.4	4.4	5.9	7.2	0.0	3.2	2	2	0	2	2	2	0	Toprim	domain
CCDC24	PF15669.5	gi|297621199|ref|YP_003709336.1|	-	2	8.2	8.6	0.92	9.3	3.9	2.6	3	0	0	3	3	3	0	Coiled-coil	domain-containing	protein	24	family
ATP-synt_D	PF01813.17	gi|297621199|ref|YP_003709336.1|	-	2.1	8.2	12.7	0.72	9.6	7.5	2.7	3	1	0	3	3	3	0	ATP	synthase	subunit	D
DUF4407	PF14362.6	gi|297621199|ref|YP_003709336.1|	-	3.5	6.9	14.0	2.2	7.6	12.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
FliD_N	PF02465.18	gi|297621199|ref|YP_003709336.1|	-	6.6	7.5	16.8	5.6	7.7	0.7	4.3	2	1	2	4	4	4	0	Flagellar	hook-associated	protein	2	N-terminus
DUF1664	PF07889.12	gi|297621199|ref|YP_003709336.1|	-	9.4	6.3	13.6	0.4	10.7	5.2	2.8	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1664)
SSB	PF00436.25	gi|297621200|ref|YP_003709337.1|	-	3.1e-20	72.2	0.1	4.7e-20	71.6	0.1	1.3	1	0	0	1	1	1	1	Single-strand	binding	protein	family
Peptidase_M17	PF00883.21	gi|297621201|ref|YP_003709338.1|	-	7.6e-123	409.7	1.9	1.1e-122	409.2	1.9	1.2	1	0	0	1	1	1	1	Cytosol	aminopeptidase	family,	catalytic	domain
Peptidase_M17_N	PF02789.17	gi|297621201|ref|YP_003709338.1|	-	5.8e-22	77.9	0.9	2.3e-21	76.0	0.1	2.3	2	0	0	2	2	2	1	Cytosol	aminopeptidase	family,	N-terminal	domain
Semialdhyde_dhC	PF02774.18	gi|297621202|ref|YP_003709339.1|	-	2.1e-31	109.4	0.0	5.5e-31	108.1	0.0	1.7	1	1	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Semialdhyde_dh	PF01118.24	gi|297621202|ref|YP_003709339.1|	-	5.9e-29	101.0	0.1	1.4e-28	99.8	0.0	1.7	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Gp_dh_C	PF02800.20	gi|297621202|ref|YP_003709339.1|	-	0.0015	18.1	0.0	0.0035	16.9	0.0	1.6	1	1	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DXP_reductoisom	PF02670.16	gi|297621202|ref|YP_003709339.1|	-	0.0023	18.6	0.0	0.0072	17.0	0.0	1.8	1	0	0	1	1	1	1	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
Sacchrp_dh_NADP	PF03435.18	gi|297621202|ref|YP_003709339.1|	-	0.016	15.5	0.1	0.11	12.7	0.0	2.4	2	1	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
DapB_N	PF01113.20	gi|297621202|ref|YP_003709339.1|	-	0.029	14.5	0.0	0.052	13.7	0.0	1.5	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
TraI_2B	PF18340.1	gi|297621202|ref|YP_003709339.1|	-	0.099	12.7	0.0	0.22	11.6	0.0	1.6	1	0	0	1	1	1	0	DNA	relaxase	TraI	2B/2B-like	domain
PP2C	PF00481.21	gi|297621203|ref|YP_003709340.1|	-	2.5e-47	161.7	0.0	3.7e-47	161.1	0.0	1.2	1	0	0	1	1	1	1	Protein	phosphatase	2C
PP2C_2	PF13672.6	gi|297621203|ref|YP_003709340.1|	-	2.4e-05	24.1	0.0	4.1e-05	23.3	0.0	1.4	1	1	0	1	1	1	1	Protein	phosphatase	2C
TPR_3	PF07720.12	gi|297621203|ref|YP_003709340.1|	-	0.013	15.5	0.3	0.037	14.0	0.3	1.8	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297621203|ref|YP_003709340.1|	-	0.13	12.2	3.3	0.83	9.6	0.4	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621203|ref|YP_003709340.1|	-	0.15	12.4	2.0	0.87	10.0	0.3	2.8	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297621203|ref|YP_003709340.1|	-	0.15	12.2	0.3	1.9	8.8	0.1	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
NeuB	PF03102.14	gi|297621205|ref|YP_003709342.1|	-	9.2e-83	277.4	0.0	1.1e-82	277.1	0.0	1.1	1	0	0	1	1	1	1	NeuB	family
SAF	PF08666.12	gi|297621205|ref|YP_003709342.1|	-	5.4e-08	33.3	0.0	1e-07	32.5	0.0	1.5	1	0	0	1	1	1	1	SAF	domain
ATPgrasp_Ter	PF15632.6	gi|297621206|ref|YP_003709343.1|	-	2.9e-13	49.7	0.0	4.4e-13	49.1	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.14	gi|297621206|ref|YP_003709343.1|	-	4.4e-11	43.1	0.0	6.4e-11	42.6	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.6	gi|297621206|ref|YP_003709343.1|	-	0.0041	16.7	0.1	0.044	13.4	0.1	2.2	1	1	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|297621206|ref|YP_003709343.1|	-	0.0075	15.8	0.0	0.029	13.8	0.0	1.9	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
DUF3301	PF11743.8	gi|297621206|ref|YP_003709343.1|	-	0.052	13.2	0.0	0.11	12.2	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3301)
Acetyltransf_4	PF13420.7	gi|297621207|ref|YP_003709344.1|	-	6.9e-12	45.8	0.0	8e-12	45.6	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|297621207|ref|YP_003709344.1|	-	0.00033	21.3	0.0	0.00044	20.9	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|297621207|ref|YP_003709344.1|	-	0.13	12.5	0.0	0.2	11.9	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	family
Epimerase	PF01370.21	gi|297621208|ref|YP_003709345.1|	-	1.4e-26	93.4	0.0	2.3e-26	92.7	0.0	1.3	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|297621208|ref|YP_003709345.1|	-	1.8e-11	44.1	0.0	9.9e-11	41.6	0.0	2.1	1	1	1	2	2	2	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|297621208|ref|YP_003709345.1|	-	6.7e-11	41.7	0.0	1.4e-10	40.7	0.0	1.4	2	0	0	2	2	2	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|297621208|ref|YP_003709345.1|	-	6.8e-07	28.7	0.0	2e-06	27.1	0.0	1.7	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
adh_short	PF00106.25	gi|297621208|ref|YP_003709345.1|	-	0.0027	17.2	0.0	0.011	15.2	0.0	1.9	2	0	0	2	2	2	1	short	chain	dehydrogenase
Polysacc_synt_2	PF02719.15	gi|297621208|ref|YP_003709345.1|	-	0.0055	15.9	0.0	0.089	11.9	0.0	2.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
RVP	PF00077.20	gi|297621208|ref|YP_003709345.1|	-	0.055	13.8	0.0	0.3	11.4	0.0	2.1	3	0	0	3	3	3	0	Retroviral	aspartyl	protease
KR	PF08659.10	gi|297621208|ref|YP_003709345.1|	-	0.077	12.9	0.0	0.15	12.0	0.0	1.5	1	0	0	1	1	1	0	KR	domain
NAD_binding_4	PF07993.12	gi|297621208|ref|YP_003709345.1|	-	0.095	11.8	0.2	0.87	8.7	0.1	2.3	2	1	1	3	3	3	0	Male	sterility	protein
Asp23	PF03780.13	gi|297621208|ref|YP_003709345.1|	-	0.11	12.9	0.0	0.2	12.1	0.0	1.3	1	0	0	1	1	1	0	Asp23	family,	cell	envelope-related	function
DNA_pol3_delta	PF06144.13	gi|297621209|ref|YP_003709346.1|	-	1.4e-14	54.2	0.0	1.9e-14	53.8	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA_22	PF13401.6	gi|297621209|ref|YP_003709346.1|	-	0.037	14.3	0.1	0.13	12.6	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
DNA_pol3_delta2	PF13177.6	gi|297621209|ref|YP_003709346.1|	-	0.041	13.7	0.0	0.29	10.9	0.0	2.1	2	1	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
DUF3283	PF11686.8	gi|297621209|ref|YP_003709346.1|	-	0.12	12.2	0.5	10	6.1	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3283)
TP_methylase	PF00590.20	gi|297621210|ref|YP_003709347.1|	-	1.2e-09	38.4	0.0	1.5e-09	38.1	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Beta_helix	PF13229.6	gi|297621211|ref|YP_003709348.1|	-	5.4e-06	26.4	8.3	0.0084	16.0	0.0	3.2	3	0	0	3	3	3	2	Right	handed	beta	helix	region
Pectate_lyase	PF03211.13	gi|297621211|ref|YP_003709348.1|	-	0.082	12.4	0.5	0.24	10.9	0.1	1.9	2	0	0	2	2	2	0	Pectate	lyase
Radical_SAM	PF04055.21	gi|297621212|ref|YP_003709349.1|	-	2.6e-20	73.5	0.0	4.5e-20	72.7	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
HemN_C	PF06969.16	gi|297621212|ref|YP_003709349.1|	-	1.7e-06	28.0	0.4	1e-05	25.5	0.6	2.3	2	0	0	2	2	2	1	HemN	C-terminal	domain
Spc7	PF08317.11	gi|297621213|ref|YP_003709350.1|	-	0.084	11.7	2.7	0.1	11.5	2.7	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
DUF919	PF06034.11	gi|297621213|ref|YP_003709350.1|	-	0.3	11.0	4.9	2.1	8.3	0.5	2.2	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
Response_reg	PF00072.24	gi|297621214|ref|YP_003709351.1|	-	2.6e-31	108.1	0.3	3e-31	107.9	0.3	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Glutaredoxin	PF00462.24	gi|297621215|ref|YP_003709352.1|	-	1.7e-11	44.2	0.0	2.5e-11	43.6	0.0	1.3	1	0	0	1	1	1	1	Glutaredoxin
GST_N_3	PF13417.6	gi|297621215|ref|YP_003709352.1|	-	9.8e-10	38.7	0.0	1.3e-09	38.4	0.0	1.1	1	0	0	1	1	1	1	Glutathione	S-transferase,	N-terminal	domain
GST_N_4	PF17172.4	gi|297621215|ref|YP_003709352.1|	-	0.00021	21.9	0.0	0.013	16.2	0.0	2.0	1	1	1	2	2	2	1	Glutathione	S-transferase	N-terminal	domain
Thioredoxin_3	PF13192.6	gi|297621215|ref|YP_003709352.1|	-	0.00072	19.6	0.0	0.0011	18.9	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_4	PF13462.6	gi|297621215|ref|YP_003709352.1|	-	0.001	19.2	0.7	0.98	9.6	0.6	2.1	1	1	1	2	2	2	2	Thioredoxin
GST_N	PF02798.20	gi|297621215|ref|YP_003709352.1|	-	0.0023	18.2	0.0	0.0032	17.8	0.0	1.2	1	0	0	1	1	1	1	Glutathione	S-transferase,	N-terminal	domain
Tom37	PF10568.9	gi|297621215|ref|YP_003709352.1|	-	0.0031	17.8	0.1	0.017	15.4	0.0	1.8	1	1	1	2	2	2	1	Outer	mitochondrial	membrane	transport	complex	protein
DSBA	PF01323.20	gi|297621215|ref|YP_003709352.1|	-	0.0067	16.2	0.7	0.15	11.8	0.0	2.0	1	1	1	2	2	2	1	DSBA-like	thioredoxin	domain
GST_N_2	PF13409.6	gi|297621215|ref|YP_003709352.1|	-	0.01	16.1	0.0	0.015	15.6	0.0	1.3	1	1	0	1	1	1	0	Glutathione	S-transferase,	N-terminal	domain
Ogr_Delta	PF04606.12	gi|297621215|ref|YP_003709352.1|	-	0.026	14.5	0.2	0.041	13.9	0.2	1.4	1	0	0	1	1	1	0	Ogr/Delta-like	zinc	finger
DUF1479	PF07350.12	gi|297621215|ref|YP_003709352.1|	-	0.046	12.5	0.3	0.46	9.2	0.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1479)
AhpC-TSA	PF00578.21	gi|297621215|ref|YP_003709352.1|	-	0.059	13.3	0.0	0.53	10.2	0.1	1.9	1	1	1	2	2	2	0	AhpC/TSA	family
DUF836	PF05768.14	gi|297621215|ref|YP_003709352.1|	-	0.11	13.0	0.0	0.15	12.4	0.0	1.2	1	0	0	1	1	1	0	Glutaredoxin-like	domain	(DUF836)
MS_channel	PF00924.18	gi|297621216|ref|YP_003709353.1|	-	1.6e-46	158.5	2.1	4.1e-46	157.1	2.1	1.7	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
DUF2512	PF10710.9	gi|297621216|ref|YP_003709353.1|	-	0.016	14.8	0.6	0.016	14.8	0.6	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2512)
GtrA	PF04138.14	gi|297621216|ref|YP_003709353.1|	-	0.12	12.6	9.1	0.25	11.6	9.1	1.4	1	0	0	1	1	1	0	GtrA-like	protein
Pyr_redox_2	PF07992.14	gi|297621217|ref|YP_003709354.1|	-	2.8e-51	174.5	0.5	3.3e-51	174.3	0.5	1.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|297621217|ref|YP_003709354.1|	-	2.1e-23	83.1	0.9	6.4e-20	71.6	0.1	2.1	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|297621217|ref|YP_003709354.1|	-	3.5e-20	72.3	0.8	5.6e-18	65.3	0.2	3.0	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|297621217|ref|YP_003709354.1|	-	2.7e-05	23.4	8.4	0.014	14.5	0.1	4.6	2	2	3	5	5	5	2	Glucose	inhibited	division	protein	A
DAO	PF01266.24	gi|297621217|ref|YP_003709354.1|	-	7e-05	22.6	1.0	0.15	11.6	0.0	3.1	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|297621217|ref|YP_003709354.1|	-	0.00023	20.4	0.2	0.023	13.8	0.1	3.2	3	0	0	3	3	3	1	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|297621217|ref|YP_003709354.1|	-	0.00032	21.1	0.1	0.047	14.1	0.0	2.6	2	1	0	2	2	2	1	Putative	NAD(P)-binding
FAD_oxidored	PF12831.7	gi|297621217|ref|YP_003709354.1|	-	0.00043	19.7	1.5	0.0027	17.1	0.1	2.5	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|297621217|ref|YP_003709354.1|	-	0.00094	18.5	0.0	0.16	11.2	0.0	2.4	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|297621217|ref|YP_003709354.1|	-	0.0011	19.2	0.0	0.019	15.2	0.0	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|297621217|ref|YP_003709354.1|	-	0.0014	17.5	0.1	0.023	13.4	0.1	2.6	3	0	0	3	3	3	1	HI0933-like	protein
K_oxygenase	PF13434.6	gi|297621217|ref|YP_003709354.1|	-	0.0035	16.6	0.1	0.31	10.1	0.0	2.8	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
AlaDh_PNT_C	PF01262.21	gi|297621217|ref|YP_003709354.1|	-	0.0053	16.1	0.1	1.1	8.5	0.0	2.4	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Thi4	PF01946.17	gi|297621217|ref|YP_003709354.1|	-	0.026	13.8	0.2	0.068	12.4	0.0	1.8	2	0	0	2	2	2	0	Thi4	family
FMO-like	PF00743.19	gi|297621217|ref|YP_003709354.1|	-	0.033	12.6	0.0	0.89	7.9	0.0	2.2	2	0	0	2	2	2	0	Flavin-binding	monooxygenase-like
Shikimate_DH	PF01488.20	gi|297621217|ref|YP_003709354.1|	-	0.042	13.9	0.2	1.1	9.3	0.0	2.5	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Trp_halogenase	PF04820.14	gi|297621217|ref|YP_003709354.1|	-	0.11	11.3	0.2	0.5	9.2	0.0	2.1	3	0	0	3	3	3	0	Tryptophan	halogenase
NAD_binding_9	PF13454.6	gi|297621217|ref|YP_003709354.1|	-	0.15	12.0	0.5	14	5.6	0.0	2.9	3	0	0	3	3	3	0	FAD-NAD(P)-binding
Imm43	PF15570.6	gi|297621217|ref|YP_003709354.1|	-	0.22	11.5	0.0	0.34	10.9	0.0	1.2	1	0	0	1	1	1	0	Immunity	protein	43
Cytochrom_C_asm	PF01578.20	gi|297621219|ref|YP_003709356.1|	-	1.7e-24	86.8	16.4	7.1e-24	84.8	12.0	2.3	2	0	0	2	2	2	2	Cytochrome	C	assembly	protein
OST3_OST6	PF04756.13	gi|297621219|ref|YP_003709356.1|	-	0.5	9.7	3.5	0.47	9.8	0.4	2.4	2	1	0	2	2	2	0	OST3	/	OST6	family,	transporter	family
DUF2269	PF10027.9	gi|297621219|ref|YP_003709356.1|	-	2.9	7.9	11.2	11	6.1	0.2	3.7	3	0	0	3	3	3	0	Predicted	integral	membrane	protein	(DUF2269)
Peptidase_S41	PF03572.18	gi|297621220|ref|YP_003709357.1|	-	1.3e-30	106.2	0.0	2.2e-30	105.4	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	S41
PDZ_4	PF17816.1	gi|297621220|ref|YP_003709357.1|	-	1.1e-17	64.4	0.1	3.4e-16	59.6	0.1	2.5	1	1	0	1	1	1	1	PDZ	domain
Lipase_3	PF01764.25	gi|297621222|ref|YP_003709359.1|	-	0.0025	17.7	0.0	0.0074	16.2	0.0	1.8	2	0	0	2	2	2	1	Lipase	(class	3)
ResB	PF05140.14	gi|297621223|ref|YP_003709360.1|	-	5.1e-08	32.1	17.8	0.00036	19.4	0.4	4.7	2	2	2	4	4	4	4	ResB-like	family
DmsC	PF04976.12	gi|297621223|ref|YP_003709360.1|	-	0.029	13.9	1.2	0.042	13.3	1.2	1.2	1	0	0	1	1	1	0	DMSO	reductase	anchor	subunit	(DmsC)
EIIC-GAT	PF03611.14	gi|297621223|ref|YP_003709360.1|	-	0.39	9.8	4.9	0.58	9.2	4.9	1.2	1	0	0	1	1	1	0	PTS	system	sugar-specific	permease	component
Wyosine_form	PF08608.12	gi|297621224|ref|YP_003709361.1|	-	0.1	12.9	0.0	0.67	10.3	0.0	2.2	2	0	0	2	2	2	0	Wyosine	base	formation
CTP_transf_3	PF02348.19	gi|297621225|ref|YP_003709362.1|	-	1.2e-30	107.1	0.2	1.5e-30	106.8	0.2	1.1	1	0	0	1	1	1	1	Cytidylyltransferase
NTP_transf_3	PF12804.7	gi|297621225|ref|YP_003709362.1|	-	3.7e-12	46.9	0.0	4.8e-12	46.5	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|297621225|ref|YP_003709362.1|	-	0.00088	19.1	0.0	0.0013	18.5	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
ADH_zinc_N	PF00107.26	gi|297621225|ref|YP_003709362.1|	-	0.13	12.2	0.0	0.21	11.6	0.0	1.3	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
DUF484	PF04340.12	gi|297621225|ref|YP_003709362.1|	-	0.14	11.9	1.3	6.1	6.5	0.1	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF484
Transket_pyr	PF02779.24	gi|297621226|ref|YP_003709363.1|	-	1.2e-58	197.8	0.0	2.1e-58	197.0	0.0	1.4	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
E1_dh	PF00676.20	gi|297621226|ref|YP_003709363.1|	-	3.3e-50	170.7	0.0	5.6e-50	170.0	0.0	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
OxoGdeHyase_C	PF16870.5	gi|297621226|ref|YP_003709363.1|	-	2.2e-42	144.3	0.0	3.5e-42	143.7	0.0	1.3	1	0	0	1	1	1	1	2-oxoglutarate	dehydrogenase	C-terminal
2-oxogl_dehyd_N	PF16078.5	gi|297621226|ref|YP_003709363.1|	-	1.4e-10	40.6	0.9	2.2e-10	39.9	0.1	1.7	2	0	0	2	2	2	1	2-oxoglutarate	dehydrogenase	N-terminus
2-oxoacid_dh	PF00198.23	gi|297621227|ref|YP_003709364.1|	-	9.5e-81	270.7	0.0	1.3e-80	270.3	0.0	1.2	1	0	0	1	1	1	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
Biotin_lipoyl	PF00364.22	gi|297621227|ref|YP_003709364.1|	-	4.6e-12	45.6	3.0	9e-12	44.7	3.0	1.5	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Pyr_redox_2	PF07992.14	gi|297621228|ref|YP_003709365.1|	-	6.2e-70	235.7	2.2	8.4e-70	235.3	2.2	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|297621228|ref|YP_003709365.1|	-	6.6e-35	119.7	0.6	6.6e-35	119.7	0.6	2.7	3	1	1	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.27	gi|297621228|ref|YP_003709365.1|	-	5.1e-23	81.4	5.9	2.8e-20	72.7	0.8	3.3	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|297621228|ref|YP_003709365.1|	-	1.1e-12	47.7	0.3	4.5e-09	35.9	0.0	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.6	gi|297621228|ref|YP_003709365.1|	-	3.9e-12	46.0	5.6	4.8e-12	45.7	2.1	2.5	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|297621228|ref|YP_003709365.1|	-	1.8e-10	40.8	5.5	7.4e-09	35.4	0.1	3.1	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|297621228|ref|YP_003709365.1|	-	4.2e-09	36.5	3.3	3.8e-05	23.8	0.7	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|297621228|ref|YP_003709365.1|	-	2.7e-08	33.4	0.3	2.7e-08	33.4	0.3	2.6	2	1	1	3	3	3	1	FAD	binding	domain
HI0933_like	PF03486.14	gi|297621228|ref|YP_003709365.1|	-	1.3e-07	30.7	10.7	1.5e-05	23.9	0.2	3.8	3	1	1	4	4	4	2	HI0933-like	protein
AlaDh_PNT_C	PF01262.21	gi|297621228|ref|YP_003709365.1|	-	3.2e-06	26.6	5.0	0.0014	17.9	0.9	2.8	3	0	0	3	3	3	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Thi4	PF01946.17	gi|297621228|ref|YP_003709365.1|	-	2.9e-05	23.4	2.1	0.0003	20.1	0.2	2.3	2	0	0	2	2	2	1	Thi4	family
FAD_binding_3	PF01494.19	gi|297621228|ref|YP_003709365.1|	-	4.4e-05	22.9	6.8	0.0023	17.3	0.1	3.0	2	1	1	3	3	3	2	FAD	binding	domain
Lycopene_cycl	PF05834.12	gi|297621228|ref|YP_003709365.1|	-	0.00052	19.2	4.1	0.019	14.1	0.0	3.0	2	1	1	3	3	3	1	Lycopene	cyclase	protein
K_oxygenase	PF13434.6	gi|297621228|ref|YP_003709365.1|	-	0.0012	18.1	0.6	0.33	10.1	0.0	2.8	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
3HCDH_N	PF02737.18	gi|297621228|ref|YP_003709365.1|	-	0.0031	17.4	0.9	0.0031	17.4	0.9	2.4	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|297621228|ref|YP_003709365.1|	-	0.0069	15.8	1.7	0.55	9.6	0.3	3.1	2	1	1	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DAO	PF01266.24	gi|297621228|ref|YP_003709365.1|	-	0.0083	15.7	16.8	0.037	13.6	1.1	4.1	2	2	0	2	2	2	1	FAD	dependent	oxidoreductase
XdhC_C	PF13478.6	gi|297621228|ref|YP_003709365.1|	-	0.049	14.1	0.1	3.3	8.2	0.0	2.5	2	0	0	2	2	2	0	XdhC	Rossmann	domain
UDPG_MGDP_dh_N	PF03721.14	gi|297621228|ref|YP_003709365.1|	-	0.31	10.6	4.5	1.2	8.7	1.4	2.7	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_9	PF13454.6	gi|297621228|ref|YP_003709365.1|	-	0.6	10.1	5.0	9.4	6.2	0.1	3.1	3	1	1	4	4	3	0	FAD-NAD(P)-binding
Fe-S_biosyn	PF01521.20	gi|297621229|ref|YP_003709366.1|	-	1.4e-12	47.7	0.0	2.4e-12	47.0	0.0	1.4	1	0	0	1	1	1	1	Iron-sulphur	cluster	biosynthesis
DUF1858	PF08984.11	gi|297621229|ref|YP_003709366.1|	-	7.5e-10	38.8	0.0	2e-09	37.5	0.0	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1858)
HTH_11	PF08279.12	gi|297621229|ref|YP_003709366.1|	-	0.08	12.9	0.5	13	5.8	0.0	3.4	3	1	0	3	3	3	0	HTH	domain
DUF498	PF04430.14	gi|297621229|ref|YP_003709366.1|	-	0.087	12.9	0.1	0.24	11.5	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF498/DUF598)
DUF1768	PF08719.11	gi|297621229|ref|YP_003709366.1|	-	0.12	12.6	0.0	0.19	12.0	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1768)
Mito_fiss_Elm1	PF06258.11	gi|297621229|ref|YP_003709366.1|	-	0.14	11.3	0.0	0.22	10.6	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	fission	ELM1
Fer2	PF00111.27	gi|297621230|ref|YP_003709367.1|	-	3.3e-13	49.4	3.0	4.1e-13	49.1	3.0	1.1	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
DHODB_Fe-S_bind	PF10418.9	gi|297621230|ref|YP_003709367.1|	-	0.0054	16.5	0.5	0.0054	16.5	0.5	2.4	3	0	0	3	3	3	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
Chorein_N	PF12624.7	gi|297621230|ref|YP_003709367.1|	-	0.13	12.4	0.0	0.16	12.1	0.0	1.2	1	0	0	1	1	1	0	N-terminal	region	of	Chorein	or	VPS13
Fer2_3	PF13085.6	gi|297621230|ref|YP_003709367.1|	-	0.54	10.3	3.3	1.1	9.3	3.3	1.6	1	1	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
RasGEF	PF00617.19	gi|297621231|ref|YP_003709368.1|	-	8.1e-31	107.6	0.8	3.3e-30	105.6	0.0	2.3	2	0	0	2	2	2	1	RasGEF	domain
Baculo_PEP_C	PF04513.12	gi|297621231|ref|YP_003709368.1|	-	0.038	14.0	0.1	0.13	12.3	0.1	2.0	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Haem_degrading	PF03928.14	gi|297621231|ref|YP_003709368.1|	-	0.14	12.3	0.0	12	6.0	0.0	2.5	2	0	0	2	2	2	0	Haem-degrading
RasGEF_N	PF00618.20	gi|297621231|ref|YP_003709368.1|	-	1.5	9.1	13.5	0.71	10.1	2.4	4.4	3	2	1	4	4	4	0	RasGEF	N-terminal	motif
DNA_pack_N	PF02500.15	gi|297621231|ref|YP_003709368.1|	-	2.3	8.0	6.2	2.6	7.8	0.5	3.2	3	0	0	3	3	3	0	Probable	DNA	packing	protein,	N-terminus
LGT	PF01790.18	gi|297621232|ref|YP_003709369.1|	-	1.8e-64	217.3	10.0	2.9e-59	200.2	7.1	2.0	2	0	0	2	2	2	2	Prolipoprotein	diacylglyceryl	transferase
Exosortase_EpsH	PF09721.10	gi|297621232|ref|YP_003709369.1|	-	0.00039	20.1	3.1	0.00039	20.1	3.1	2.3	2	1	1	3	3	3	1	Transmembrane	exosortase	(Exosortase_EpsH)
UPF0154	PF03672.13	gi|297621232|ref|YP_003709369.1|	-	0.026	14.6	0.4	1	9.4	0.1	3.2	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0154)
LapA_dom	PF06305.11	gi|297621232|ref|YP_003709369.1|	-	0.062	13.1	0.1	0.062	13.1	0.1	3.9	6	0	0	6	6	6	0	Lipopolysaccharide	assembly	protein	A	domain
Romo1	PF10247.9	gi|297621232|ref|YP_003709369.1|	-	0.069	13.5	0.7	4.8	7.6	0.0	3.1	3	0	0	3	3	3	0	Reactive	mitochondrial	oxygen	species	modulator	1
NEMP	PF10225.9	gi|297621232|ref|YP_003709369.1|	-	0.89	9.2	5.0	1.2	8.8	0.3	2.6	3	0	0	3	3	3	0	NEMP	family
AdoHcyase	PF05221.17	gi|297621233|ref|YP_003709370.1|	-	4.5e-127	423.3	0.0	6.9e-69	232.3	0.0	2.0	1	1	1	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.21	gi|297621233|ref|YP_003709370.1|	-	2.2e-75	252.2	2.2	3.1e-75	251.7	2.2	1.2	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|297621233|ref|YP_003709370.1|	-	5.9e-08	32.3	0.1	9.6e-08	31.6	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|297621233|ref|YP_003709370.1|	-	1.2e-05	24.9	0.0	2e-05	24.2	0.0	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
THF_DHG_CYH_C	PF02882.19	gi|297621233|ref|YP_003709370.1|	-	0.0016	17.8	1.5	0.0075	15.6	1.5	1.9	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
TrkA_N	PF02254.18	gi|297621233|ref|YP_003709370.1|	-	0.0021	18.3	0.1	0.004	17.4	0.1	1.5	1	0	0	1	1	1	1	TrkA-N	domain
NAD_binding_7	PF13241.6	gi|297621233|ref|YP_003709370.1|	-	0.049	14.1	0.2	0.12	12.8	0.2	1.7	1	0	0	1	1	1	0	Putative	NAD(P)-binding
ELFV_dehydrog	PF00208.21	gi|297621233|ref|YP_003709370.1|	-	0.074	12.8	0.1	0.13	11.9	0.1	1.4	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
3HCDH_N	PF02737.18	gi|297621233|ref|YP_003709370.1|	-	0.11	12.4	0.6	0.23	11.3	0.4	1.6	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|297621233|ref|YP_003709370.1|	-	0.56	9.5	4.0	1.4	8.1	4.0	1.6	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Bac_DnaA	PF00308.18	gi|297621234|ref|YP_003709371.1|	-	6.4e-54	183.1	0.2	1.6e-53	181.8	0.0	1.7	2	0	0	2	2	2	1	Bacterial	dnaA	protein
Bac_DnaA_C	PF08299.11	gi|297621234|ref|YP_003709371.1|	-	2.1e-24	85.3	0.1	4.8e-24	84.2	0.1	1.7	1	0	0	1	1	1	1	Bacterial	dnaA	protein	helix-turn-helix
IstB_IS21	PF01695.17	gi|297621234|ref|YP_003709371.1|	-	2.7e-10	40.3	0.0	5.2e-10	39.3	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA	PF00004.29	gi|297621234|ref|YP_003709371.1|	-	2e-05	25.1	0.0	8.2e-05	23.0	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.14	gi|297621234|ref|YP_003709371.1|	-	0.00016	21.7	0.2	0.0051	16.8	0.0	2.9	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
DnaA_N	PF11638.8	gi|297621234|ref|YP_003709371.1|	-	0.0014	18.3	0.6	0.003	17.3	0.6	1.6	1	0	0	1	1	1	1	DnaA	N-terminal	domain
DNA_pol3_delta	PF06144.13	gi|297621234|ref|YP_003709371.1|	-	0.005	16.6	0.1	0.013	15.3	0.1	1.8	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
ATPase_2	PF01637.18	gi|297621234|ref|YP_003709371.1|	-	0.0079	16.1	0.8	0.072	13.0	0.0	2.7	2	2	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
TsaE	PF02367.17	gi|297621234|ref|YP_003709371.1|	-	0.015	15.3	0.0	0.033	14.2	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_19	PF13245.6	gi|297621234|ref|YP_003709371.1|	-	0.033	14.5	0.1	0.054	13.8	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|297621234|ref|YP_003709371.1|	-	0.036	14.5	0.5	0.18	12.2	0.5	2.3	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_14	PF13173.6	gi|297621234|ref|YP_003709371.1|	-	0.043	13.8	0.0	0.11	12.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|297621234|ref|YP_003709371.1|	-	0.055	13.9	0.1	0.92	9.9	0.0	2.8	2	1	0	2	2	2	0	RNA	helicase
AAA_22	PF13401.6	gi|297621234|ref|YP_003709371.1|	-	0.066	13.5	1.7	5.5	7.3	1.7	3.0	1	1	0	1	1	1	0	AAA	domain
DUF3663	PF12404.8	gi|297621234|ref|YP_003709371.1|	-	0.072	13.2	0.2	0.87	9.7	0.0	2.6	3	0	0	3	3	3	0	Peptidase
NACHT	PF05729.12	gi|297621234|ref|YP_003709371.1|	-	0.1	12.5	3.8	0.83	9.5	0.2	3.2	2	1	2	4	4	4	0	NACHT	domain
60KD_IMP	PF02096.20	gi|297621235|ref|YP_003709372.1|	-	4.2e-54	182.9	7.8	4.2e-54	182.9	7.8	2.1	2	0	0	2	2	2	1	60Kd	inner	membrane	protein
TerC	PF03741.16	gi|297621235|ref|YP_003709372.1|	-	0.39	10.4	2.3	14	5.3	0.0	2.7	3	0	0	3	3	3	0	Integral	membrane	protein	TerC	family
FGE-sulfatase	PF03781.16	gi|297621236|ref|YP_003709373.1|	-	6.9e-62	209.4	0.9	1.1e-61	208.7	0.9	1.2	1	0	0	1	1	1	1	Sulfatase-modifying	factor	enzyme	1
Pkinase	PF00069.25	gi|297621236|ref|YP_003709373.1|	-	3.2e-28	98.8	0.0	8.8e-28	97.4	0.0	1.8	1	1	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|297621236|ref|YP_003709373.1|	-	1.3e-16	60.7	0.5	4e-14	52.5	0.0	3.1	2	1	0	2	2	2	2	Protein	tyrosine	kinase
LMWPc	PF01451.21	gi|297621237|ref|YP_003709374.1|	-	9.5e-32	110.3	0.0	1.2e-31	110.0	0.0	1.0	1	0	0	1	1	1	1	Low	molecular	weight	phosphotyrosine	protein	phosphatase
PTS_IIB	PF02302.17	gi|297621237|ref|YP_003709374.1|	-	0.11	13.2	0.0	13	6.6	0.0	2.2	1	1	1	2	2	2	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
DciA	PF05258.12	gi|297621238|ref|YP_003709375.1|	-	4.7e-15	55.8	0.0	5.7e-15	55.5	0.0	1.1	1	0	0	1	1	1	1	Dna[CI]	antecedent,	DciA
DNA_gyraseB	PF00204.25	gi|297621239|ref|YP_003709376.1|	-	1.4e-61	207.0	0.0	2.3e-61	206.3	0.0	1.4	1	0	0	1	1	1	1	DNA	gyrase	B
DNA_gyraseB_C	PF00986.21	gi|297621239|ref|YP_003709376.1|	-	1.2e-30	105.4	0.1	2.4e-30	104.5	0.1	1.5	1	0	0	1	1	1	1	DNA	gyrase	B	subunit,	carboxyl	terminus
HATPase_c	PF02518.26	gi|297621239|ref|YP_003709376.1|	-	1.7e-19	70.3	1.0	4.4e-19	69.0	0.2	2.2	3	0	0	3	3	3	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Toprim	PF01751.22	gi|297621239|ref|YP_003709376.1|	-	6.5e-19	68.1	0.0	2.2e-18	66.4	0.0	2.0	1	0	0	1	1	1	1	Toprim	domain
HATPase_c_3	PF13589.6	gi|297621239|ref|YP_003709376.1|	-	6.5e-06	26.0	0.3	2.3e-05	24.3	0.3	1.9	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
DNA_topoisoIV	PF00521.20	gi|297621240|ref|YP_003709377.1|	-	2.4e-153	511.1	0.1	3e-153	510.7	0.1	1.1	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
DNA_gyraseA_C	PF03989.13	gi|297621240|ref|YP_003709377.1|	-	3e-68	225.1	8.9	2.5e-13	49.2	0.0	6.8	7	0	0	7	7	7	6	DNA	gyrase	C-terminal	domain,	beta-propeller
NTase_sub_bind	PF08780.11	gi|297621240|ref|YP_003709377.1|	-	0.0025	17.8	0.4	0.0046	16.9	0.4	1.4	1	0	0	1	1	1	1	Nucleotidyltransferase	substrate	binding	protein	like
CCDC53	PF10152.9	gi|297621240|ref|YP_003709377.1|	-	0.023	15.1	0.3	0.042	14.3	0.3	1.4	1	0	0	1	1	1	0	Subunit	CCDC53	of	WASH	complex
HTH_25	PF13413.6	gi|297621240|ref|YP_003709377.1|	-	0.37	10.7	2.0	5.2	7.0	0.4	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
Thymidylate_kin	PF02223.17	gi|297621242|ref|YP_003709379.1|	-	1.5e-50	171.5	0.0	1.6e-50	171.3	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_28	PF13521.6	gi|297621242|ref|YP_003709379.1|	-	1.3e-08	35.3	0.0	1.5e-08	35.0	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|297621242|ref|YP_003709379.1|	-	6.2e-06	26.8	0.0	1.5e-05	25.6	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|297621242|ref|YP_003709379.1|	-	0.00039	20.8	0.3	0.021	15.2	0.3	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|297621242|ref|YP_003709379.1|	-	0.0005	20.3	0.0	0.0014	18.8	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|297621242|ref|YP_003709379.1|	-	0.00098	19.0	0.3	0.12	12.2	0.1	2.5	2	2	0	2	2	2	1	Deoxynucleoside	kinase
AAA_30	PF13604.6	gi|297621242|ref|YP_003709379.1|	-	0.0021	17.8	0.0	0.0038	17.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|297621242|ref|YP_003709379.1|	-	0.0025	16.8	0.0	0.0037	16.2	0.0	1.2	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ATP_bind_1	PF03029.17	gi|297621242|ref|YP_003709379.1|	-	0.0027	17.6	0.2	0.011	15.6	0.0	1.9	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
AAA_22	PF13401.6	gi|297621242|ref|YP_003709379.1|	-	0.0036	17.6	0.0	0.019	15.2	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
SRP54	PF00448.22	gi|297621242|ref|YP_003709379.1|	-	0.0047	16.6	0.0	0.0074	15.9	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.15	gi|297621242|ref|YP_003709379.1|	-	0.0071	16.3	0.1	0.02	14.8	0.1	2.0	2	1	0	2	2	2	1	NTPase
AAA_16	PF13191.6	gi|297621242|ref|YP_003709379.1|	-	0.017	15.5	0.1	0.022	15.1	0.1	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
Zeta_toxin	PF06414.12	gi|297621242|ref|YP_003709379.1|	-	0.017	14.4	0.0	0.059	12.6	0.0	1.8	2	0	0	2	2	2	0	Zeta	toxin
SKI	PF01202.22	gi|297621242|ref|YP_003709379.1|	-	0.018	15.2	0.2	1.4	9.0	0.0	2.2	2	0	0	2	2	2	0	Shikimate	kinase
NACHT	PF05729.12	gi|297621242|ref|YP_003709379.1|	-	0.019	14.9	0.0	0.035	14.0	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
ATPase_2	PF01637.18	gi|297621242|ref|YP_003709379.1|	-	0.019	14.9	0.0	0.034	14.0	0.0	1.5	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
CbiA	PF01656.23	gi|297621242|ref|YP_003709379.1|	-	0.02	15.0	0.0	0.046	13.8	0.0	1.6	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
CLP1_P	PF16575.5	gi|297621242|ref|YP_003709379.1|	-	0.024	14.4	0.1	0.11	12.3	0.0	1.9	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
MobB	PF03205.14	gi|297621242|ref|YP_003709379.1|	-	0.026	14.4	0.1	0.078	12.9	0.0	1.8	2	0	0	2	2	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KTI12	PF08433.10	gi|297621242|ref|YP_003709379.1|	-	0.03	13.8	0.0	0.68	9.3	0.0	2.1	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_19	PF13245.6	gi|297621242|ref|YP_003709379.1|	-	0.04	14.2	0.1	0.068	13.5	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|297621242|ref|YP_003709379.1|	-	0.042	14.4	0.0	0.067	13.7	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
AAA	PF00004.29	gi|297621242|ref|YP_003709379.1|	-	0.054	13.9	0.0	0.095	13.1	0.0	1.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_31	PF13614.6	gi|297621242|ref|YP_003709379.1|	-	0.057	13.3	0.1	0.15	11.9	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
KAP_NTPase	PF07693.14	gi|297621242|ref|YP_003709379.1|	-	0.076	12.2	0.0	0.077	12.2	0.0	1.2	1	0	0	1	1	1	0	KAP	family	P-loop	domain
TsaE	PF02367.17	gi|297621242|ref|YP_003709379.1|	-	0.078	13.0	0.0	0.24	11.4	0.0	1.8	2	0	0	2	2	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
MeaB	PF03308.16	gi|297621242|ref|YP_003709379.1|	-	0.086	11.8	0.1	0.14	11.1	0.1	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
T2SSE	PF00437.20	gi|297621242|ref|YP_003709379.1|	-	0.11	11.5	0.0	0.2	10.7	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
cobW	PF02492.19	gi|297621242|ref|YP_003709379.1|	-	0.12	11.9	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
MMR_HSR1	PF01926.23	gi|297621242|ref|YP_003709379.1|	-	0.18	11.9	0.1	0.81	9.8	0.0	2.0	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
DNA_pol3_delta2	PF13177.6	gi|297621243|ref|YP_003709380.1|	-	1.7e-30	106.0	1.3	8.9e-28	97.1	0.0	3.1	2	1	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA	PF00004.29	gi|297621243|ref|YP_003709380.1|	-	0.0047	17.4	0.2	0.053	13.9	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
IKKbetaNEMObind	PF12179.8	gi|297621243|ref|YP_003709380.1|	-	0.24	11.5	1.3	5.1	7.2	0.6	2.6	2	0	0	2	2	2	0	I-kappa-kinase-beta	NEMO	binding	domain
Herpes_BLRF2	PF05812.12	gi|297621243|ref|YP_003709380.1|	-	0.24	11.5	1.7	0.46	10.6	1.7	1.4	1	0	0	1	1	1	0	Herpesvirus	BLRF2	protein
Chorismate_bind	PF00425.18	gi|297621244|ref|YP_003709381.1|	-	1.1e-38	133.2	0.0	1.4e-38	133.0	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
TPP_enzyme_N	PF02776.18	gi|297621245|ref|YP_003709382.1|	-	3e-28	98.6	0.0	4.2e-28	98.1	0.0	1.2	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Peptidase_M55	PF04951.13	gi|297621245|ref|YP_003709382.1|	-	0.15	11.4	0.0	0.23	10.8	0.0	1.2	1	0	0	1	1	1	0	D-aminopeptidase
IstB_IS21	PF01695.17	gi|297621248|ref|YP_003709385.1|	-	1.1e-12	48.0	0.1	1.3e-12	47.8	0.1	1.0	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Met_gamma_lyase	PF06838.11	gi|297621248|ref|YP_003709385.1|	-	0.19	10.2	0.0	0.22	10.0	0.0	1.0	1	0	0	1	1	1	0	Methionine	gamma-lyase
Imm53	PF15580.6	gi|297621249|ref|YP_003709386.1|	-	6.6e-34	115.5	3.6	8.2e-34	115.2	3.6	1.1	1	0	0	1	1	1	1	Immunity	protein	53
RHS_repeat	PF05593.14	gi|297621251|ref|YP_003709388.1|	-	5.1e-44	148.2	69.8	7.7e-06	26.3	0.0	23.4	20	4	3	23	23	23	16	RHS	Repeat
MORN_2	PF07661.13	gi|297621251|ref|YP_003709388.1|	-	0.066	13.5	3.6	44	4.8	0.3	6.0	6	0	0	6	6	6	0	MORN	repeat	variant
DUF1372	PF07116.11	gi|297621253|ref|YP_003709390.1|	-	0.072	13.3	0.0	0.13	12.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1372)
DUF2937	PF11157.8	gi|297621254|ref|YP_003709391.1|	-	1.6e-47	161.2	2.1	1.8e-47	161.1	2.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2937)
PHB_acc	PF05233.13	gi|297621254|ref|YP_003709391.1|	-	0.023	14.7	2.4	0.023	14.7	2.4	1.7	2	0	0	2	2	2	0	PHB	accumulation	regulatory	domain
ECH_1	PF00378.20	gi|297621255|ref|YP_003709392.1|	-	3.6e-82	275.4	0.0	4.4e-82	275.2	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
ECH_2	PF16113.5	gi|297621255|ref|YP_003709392.1|	-	1.9e-20	73.6	0.0	2.7e-20	73.1	0.0	1.2	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
SDH_sah	PF01972.16	gi|297621255|ref|YP_003709392.1|	-	0.0047	16.0	0.0	0.0066	15.5	0.0	1.2	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
DUF1666	PF07891.12	gi|297621255|ref|YP_003709392.1|	-	0.083	12.6	0.2	0.12	12.0	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1666)
UbiA	PF01040.18	gi|297621256|ref|YP_003709393.1|	-	6.6e-34	117.3	23.7	8e-34	117.1	23.7	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
MR_MLE_C	PF13378.6	gi|297621257|ref|YP_003709394.1|	-	2.5e-08	33.8	0.0	3.4e-05	23.5	0.0	2.1	2	0	0	2	2	2	2	Enolase	C-terminal	domain-like
AMP-binding	PF00501.28	gi|297621258|ref|YP_003709395.1|	-	9.9e-27	93.6	0.0	1.2e-26	93.3	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
PDEase_I	PF00233.19	gi|297621259|ref|YP_003709396.1|	-	0.028	14.1	1.8	0.037	13.8	0.1	1.9	2	0	0	2	2	2	0	3'5'-cyclic	nucleotide	phosphodiesterase
Glyco_transf_41	PF13844.6	gi|297621259|ref|YP_003709396.1|	-	0.032	12.7	0.2	0.051	12.0	0.2	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	41
Caudo_TAP	PF02413.17	gi|297621259|ref|YP_003709396.1|	-	0.19	11.9	2.3	2.7	8.2	0.2	2.7	2	0	0	2	2	2	0	Caudovirales	tail	fibre	assembly	protein,	lambda	gpK
Glycos_transf_2	PF00535.26	gi|297621260|ref|YP_003709397.1|	-	1.1e-35	122.9	0.0	1.8e-35	122.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|297621260|ref|YP_003709397.1|	-	5.6e-18	65.4	0.0	1e-17	64.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|297621260|ref|YP_003709397.1|	-	2e-15	57.3	0.0	3.6e-15	56.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
TPR_2	PF07719.17	gi|297621260|ref|YP_003709397.1|	-	5.4e-14	51.1	1.3	0.00013	21.8	0.1	3.6	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297621260|ref|YP_003709397.1|	-	3.2e-10	39.4	1.6	0.0059	16.4	0.0	3.7	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297621260|ref|YP_003709397.1|	-	4.1e-08	33.6	1.2	3e-07	30.9	0.1	2.6	3	0	0	3	3	3	1	Tetratricopeptide	repeat
Glyco_tranf_2_4	PF13704.6	gi|297621260|ref|YP_003709397.1|	-	1.2e-06	28.9	0.0	7.5e-06	26.4	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
TPR_11	PF13414.6	gi|297621260|ref|YP_003709397.1|	-	1.9e-06	27.4	0.5	4.9e-05	22.9	0.0	3.0	2	1	1	3	3	3	1	TPR	repeat
TPR_16	PF13432.6	gi|297621260|ref|YP_003709397.1|	-	1.3e-05	25.7	3.1	1.5e-05	25.5	0.1	2.5	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297621260|ref|YP_003709397.1|	-	1.7e-05	25.0	0.7	0.00032	20.9	0.6	2.7	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|297621260|ref|YP_003709397.1|	-	3.1e-05	23.7	0.2	0.19	11.8	0.1	2.9	2	0	0	2	2	2	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297621260|ref|YP_003709397.1|	-	3.6e-05	23.9	2.7	4e-05	23.8	0.9	2.0	2	1	0	2	2	2	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_17	PF13431.6	gi|297621260|ref|YP_003709397.1|	-	0.00011	22.3	1.3	0.066	13.6	0.1	3.4	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621260|ref|YP_003709397.1|	-	0.0074	16.4	0.9	0.11	12.7	0.0	3.1	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297621260|ref|YP_003709397.1|	-	0.0098	16.5	1.0	0.7	10.7	0.0	3.2	3	0	0	3	3	2	1	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|297621260|ref|YP_003709397.1|	-	0.013	15.4	2.9	0.49	10.3	0.5	3.4	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|297621260|ref|YP_003709397.1|	-	0.065	14.1	0.0	3.5	8.7	0.0	2.8	1	1	1	2	2	2	0	Tetratricopeptide	repeat
Ubie_methyltran	PF01209.18	gi|297621261|ref|YP_003709398.1|	-	1.7e-63	214.1	0.0	2e-63	213.8	0.0	1.0	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.12	gi|297621261|ref|YP_003709398.1|	-	6.6e-21	74.8	0.0	9.9e-21	74.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297621261|ref|YP_003709398.1|	-	1.1e-20	74.1	0.0	4.8e-20	72.1	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|297621261|ref|YP_003709398.1|	-	5.3e-19	68.5	0.0	8.4e-19	67.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297621261|ref|YP_003709398.1|	-	1.1e-11	44.9	0.0	1.4e-11	44.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297621261|ref|YP_003709398.1|	-	2.7e-11	44.1	0.0	4.8e-11	43.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|297621261|ref|YP_003709398.1|	-	5.1e-06	26.1	0.0	8.2e-06	25.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_8	PF05148.15	gi|297621261|ref|YP_003709398.1|	-	0.00015	21.7	0.0	0.0021	17.9	0.0	2.1	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_2	PF00891.18	gi|297621261|ref|YP_003709398.1|	-	0.0027	17.0	0.0	0.0034	16.7	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase	domain
UPF0020	PF01170.18	gi|297621261|ref|YP_003709398.1|	-	0.005	16.6	0.0	0.011	15.5	0.0	1.5	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_18	PF12847.7	gi|297621261|ref|YP_003709398.1|	-	0.0054	16.7	0.0	0.011	15.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.12	gi|297621261|ref|YP_003709398.1|	-	0.0078	15.8	0.0	0.012	15.2	0.0	1.4	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
DUF5617	PF18493.1	gi|297621261|ref|YP_003709398.1|	-	0.051	13.7	0.1	0.12	12.5	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5617)
Methyltransf_15	PF09445.10	gi|297621261|ref|YP_003709398.1|	-	0.14	11.7	0.0	0.23	11.0	0.0	1.3	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
DUF3604	PF12228.8	gi|297621263|ref|YP_003709400.1|	-	2.8e-08	32.7	4.8	0.00031	19.3	0.0	3.8	4	1	0	4	4	4	2	Protein	of	unknown	function	(DUF3604)
I-set	PF07679.16	gi|297621263|ref|YP_003709400.1|	-	0.017	15.2	0.0	0.088	12.9	0.0	2.2	2	0	0	2	2	2	0	Immunoglobulin	I-set	domain
DUF3552	PF12072.8	gi|297621264|ref|YP_003709401.1|	-	5.7e-23	81.4	27.2	5.7e-23	81.4	27.2	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF3552)
HD	PF01966.22	gi|297621264|ref|YP_003709401.1|	-	1.3e-12	48.1	0.2	1.3e-12	48.1	0.2	2.8	3	0	0	3	3	3	1	HD	domain
KH_1	PF00013.29	gi|297621264|ref|YP_003709401.1|	-	1.8e-07	30.8	0.0	6.3e-07	29.1	0.0	2.0	2	0	0	2	2	2	1	KH	domain
HDOD	PF08668.12	gi|297621264|ref|YP_003709401.1|	-	0.0001	21.8	0.1	0.0047	16.4	0.1	2.8	2	0	0	2	2	2	1	HDOD	domain
KH_4	PF13083.6	gi|297621264|ref|YP_003709401.1|	-	0.00021	21.1	0.3	0.002	17.9	0.0	2.9	2	1	0	2	2	2	1	KH	domain
KH_2	PF07650.17	gi|297621264|ref|YP_003709401.1|	-	0.23	11.3	0.1	0.23	11.3	0.1	3.2	5	1	0	5	5	5	0	KH	domain
LMBR1	PF04791.16	gi|297621264|ref|YP_003709401.1|	-	2.4	7.0	9.1	3.8	6.3	9.1	1.2	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
CorC_HlyC	PF03471.17	gi|297621265|ref|YP_003709402.1|	-	5.5e-20	71.2	0.0	1.4e-19	69.9	0.0	1.7	1	0	0	1	1	1	1	Transporter	associated	domain
CBS	PF00571.28	gi|297621265|ref|YP_003709402.1|	-	2.1e-16	60.1	1.1	2.6e-07	31.0	0.1	2.5	2	0	0	2	2	2	2	CBS	domain
DUF21	PF01595.20	gi|297621265|ref|YP_003709402.1|	-	5.8e-10	39.1	3.3	1.1e-09	38.2	3.3	1.5	1	1	0	1	1	1	1	Cyclin	M	transmembrane	N-terminal	domain
HAD_2	PF13419.6	gi|297621265|ref|YP_003709402.1|	-	0.17	12.0	1.6	0.19	11.8	0.3	1.7	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
UPF0054	PF02130.17	gi|297621266|ref|YP_003709403.1|	-	2.6e-27	95.2	0.1	3.2e-27	94.9	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0054
HSCB_C	PF07743.13	gi|297621269|ref|YP_003709406.1|	-	0.0023	18.4	3.8	15	6.2	0.0	4.9	5	0	0	5	5	5	0	HSCB	C-terminal	oligomerisation	domain
YtxH	PF12732.7	gi|297621269|ref|YP_003709406.1|	-	0.0033	17.9	11.1	0.9	10.1	0.2	4.6	3	1	0	3	3	3	2	YtxH-like	protein
Phasin_2	PF09361.10	gi|297621269|ref|YP_003709406.1|	-	0.0099	16.1	0.1	37	4.7	0.0	4.4	3	1	0	4	4	4	0	Phasin	protein
ApoO	PF09769.9	gi|297621269|ref|YP_003709406.1|	-	0.01	15.8	2.6	0.84	9.6	0.1	3.6	2	1	1	3	3	3	0	Apolipoprotein	O
DUF2884	PF11101.8	gi|297621269|ref|YP_003709406.1|	-	0.011	15.2	2.1	0.48	9.9	0.0	3.0	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2884)
Apolipoprotein	PF01442.18	gi|297621269|ref|YP_003709406.1|	-	0.02	14.8	0.1	11	5.9	0.0	2.9	3	0	0	3	3	3	0	Apolipoprotein	A1/A4/E	domain
Baculo_PEP_C	PF04513.12	gi|297621269|ref|YP_003709406.1|	-	0.048	13.7	1.0	7.5	6.6	0.1	3.7	3	1	0	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Pre-PUA	PF17832.1	gi|297621269|ref|YP_003709406.1|	-	0.053	14.2	10.5	0.077	13.7	0.1	3.7	4	0	0	4	4	3	0	Pre-PUA-like	domain
ApoLp-III	PF07464.11	gi|297621269|ref|YP_003709406.1|	-	0.055	13.6	17.9	0.082	13.0	0.5	4.6	3	1	2	5	5	5	0	Apolipophorin-III	precursor	(apoLp-III)
DCB	PF16213.5	gi|297621269|ref|YP_003709406.1|	-	0.088	12.5	2.9	0.14	11.8	0.9	2.2	2	0	0	2	2	2	0	Dimerisation	and	cyclophilin-binding	domain	of	Mon2
DUF948	PF06103.11	gi|297621269|ref|YP_003709406.1|	-	0.22	11.8	3.3	79	3.6	0.1	3.7	2	1	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
MCPsignal	PF00015.21	gi|297621269|ref|YP_003709406.1|	-	0.25	11.2	4.2	2.8	7.7	0.2	3.1	2	1	1	3	3	3	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
PXA	PF02194.15	gi|297621269|ref|YP_003709406.1|	-	0.49	10.3	3.3	17	5.4	2.9	2.6	1	1	1	2	2	2	0	PXA	domain
Exonuc_VII_L	PF02601.15	gi|297621269|ref|YP_003709406.1|	-	0.6	9.6	4.6	4.3	6.8	0.2	2.5	2	1	1	3	3	3	0	Exonuclease	VII,	large	subunit
YGGT	PF02325.17	gi|297621269|ref|YP_003709406.1|	-	0.61	10.5	6.6	18	5.8	0.1	4.0	4	1	1	5	5	3	0	YGGT	family
COG2	PF06148.11	gi|297621269|ref|YP_003709406.1|	-	0.75	9.9	11.7	2.4	8.2	0.1	4.0	4	1	0	4	4	4	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
OATP	PF03137.20	gi|297621269|ref|YP_003709406.1|	-	1	7.5	4.3	0.21	9.8	0.9	1.4	2	0	0	2	2	2	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Laminin_II	PF06009.12	gi|297621269|ref|YP_003709406.1|	-	7	6.7	14.9	0.84	9.6	1.9	4.0	4	1	0	4	4	4	0	Laminin	Domain	II
DNA_pol3_chi	PF04364.13	gi|297621270|ref|YP_003709407.1|	-	1.8e-22	80.0	0.1	2.1e-22	79.8	0.1	1.0	1	0	0	1	1	1	1	DNA	polymerase	III	chi	subunit,	HolC
DUF502	PF04367.13	gi|297621271|ref|YP_003709408.1|	-	6.4e-29	100.0	2.1	1e-28	99.3	0.1	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF502)
PEN-2	PF10251.9	gi|297621271|ref|YP_003709408.1|	-	0.054	13.9	2.0	0.059	13.8	0.5	1.8	2	1	0	2	2	2	0	Presenilin	enhancer-2	subunit	of	gamma	secretase
DUF502	PF04367.13	gi|297621272|ref|YP_003709409.1|	-	3.1e-35	120.3	4.7	1.1e-34	118.6	0.5	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF502)
Pilin_PilA	PF14245.6	gi|297621274|ref|YP_003709411.1|	-	0.014	15.4	0.0	0.021	14.8	0.0	1.3	1	0	0	1	1	1	0	Type	IV	pilin	PilA
Npun_R1517	PF18068.1	gi|297621274|ref|YP_003709411.1|	-	0.15	12.4	0.0	0.3	11.5	0.0	1.5	1	0	0	1	1	1	0	Npun	R1517
RNB	PF00773.19	gi|297621275|ref|YP_003709412.1|	-	2.8e-107	358.9	0.0	4.4e-107	358.2	0.0	1.3	1	0	0	1	1	1	1	RNB	domain
OB_RNB	PF08206.11	gi|297621275|ref|YP_003709412.1|	-	1.5e-15	56.6	0.9	2.5e-15	55.9	0.1	1.9	2	0	0	2	2	2	1	Ribonuclease	B	OB	domain
CSD2	PF17876.1	gi|297621275|ref|YP_003709412.1|	-	2.9e-15	56.2	0.7	5.2e-07	29.7	0.0	2.5	2	0	0	2	2	2	2	Cold	shock	domain
S1	PF00575.23	gi|297621275|ref|YP_003709412.1|	-	1.3e-08	35.0	1.0	0.00024	21.4	0.0	3.6	3	0	0	3	3	3	2	S1	RNA	binding	domain
NUDIX_5	PF16705.5	gi|297621275|ref|YP_003709412.1|	-	0.077	12.8	0.1	0.16	11.7	0.1	1.6	1	0	0	1	1	1	0	NUDIX,	or	N-terminal	NPxY	motif-rich,	region	of	KRIT
tRNA-synt_1	PF00133.22	gi|297621276|ref|YP_003709413.1|	-	1.3e-62	212.0	0.0	1e-48	166.0	0.0	4.0	2	1	1	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1_2	PF13603.6	gi|297621276|ref|YP_003709413.1|	-	3e-60	202.9	0.0	6.8e-60	201.8	0.0	1.6	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1g	PF09334.11	gi|297621276|ref|YP_003709413.1|	-	6.4e-26	91.0	1.8	8e-20	70.9	0.0	3.6	4	0	0	4	4	4	2	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.13	gi|297621276|ref|YP_003709413.1|	-	4.3e-16	59.2	0.1	2.5e-15	56.7	0.1	2.1	1	1	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.19	gi|297621276|ref|YP_003709413.1|	-	0.024	14.0	0.0	6.1	6.1	0.0	2.6	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
DUF2063	PF09836.9	gi|297621277|ref|YP_003709414.1|	-	8.2e-19	67.6	0.0	2.4e-18	66.1	0.0	1.8	2	0	0	2	2	2	1	Putative	DNA-binding	domain
DUF692	PF05114.13	gi|297621278|ref|YP_003709415.1|	-	3.3e-100	334.6	0.0	3.8e-100	334.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF692)
GxGYxYP_N	PF16216.5	gi|297621280|ref|YP_003709417.1|	-	0.005	17.0	0.2	0.017	15.3	0.1	2.0	2	0	0	2	2	2	1	GxGYxY	sequence	motif	in	domain	of	unknown	function	N-terminal
rpo30_N	PF12410.8	gi|297621280|ref|YP_003709417.1|	-	0.012	15.5	0.6	0.042	13.7	0.1	2.2	2	0	0	2	2	2	0	Poxvirus	DNA	dependent	RNA	polymerase	30kDa	subunit
DUF1241	PF06840.11	gi|297621280|ref|YP_003709417.1|	-	0.054	13.1	4.1	0.6	9.7	0.1	3.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1241)
DBD_Tnp_Hermes	PF10683.9	gi|297621280|ref|YP_003709417.1|	-	0.11	12.2	0.0	0.38	10.5	0.0	1.9	1	0	0	1	1	1	0	Hermes	transposase	DNA-binding	domain
T4_Gp59_C	PF08994.10	gi|297621280|ref|YP_003709417.1|	-	1.3	9.6	9.0	1.7	9.3	0.5	3.7	3	0	0	3	3	3	0	T4	gene	Gp59	loader	of	gp41	DNA	helicase	C-term
DHR-2	PF06920.13	gi|297621281|ref|YP_003709418.1|	-	0.069	11.8	0.2	0.11	11.1	0.2	1.4	1	1	0	1	1	1	0	Dock	homology	region	2
Chorismate_synt	PF01264.21	gi|297621282|ref|YP_003709419.1|	-	6.2e-130	432.7	0.0	6.9e-130	432.5	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
Arginase	PF00491.21	gi|297621284|ref|YP_003709421.1|	-	8e-63	212.5	0.0	9.1e-63	212.4	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
TPR_2	PF07719.17	gi|297621284|ref|YP_003709421.1|	-	0.08	13.1	0.4	0.16	12.1	0.4	1.5	1	0	0	1	1	1	0	Tetratricopeptide	repeat
STALD	PF18185.1	gi|297621284|ref|YP_003709421.1|	-	0.2	11.0	0.0	0.28	10.5	0.0	1.2	1	0	0	1	1	1	0	Sir2-	and	TIR-associating	SLOG	family
Amidohydro_3	PF07969.11	gi|297621285|ref|YP_003709422.1|	-	2.6e-18	66.8	1.0	8.5e-13	48.6	0.2	2.9	1	1	1	2	2	2	2	Amidohydrolase	family
Amidohydro_1	PF01979.20	gi|297621285|ref|YP_003709422.1|	-	6.5e-18	65.1	0.2	1.3e-16	60.8	0.2	2.6	1	1	0	1	1	1	1	Amidohydrolase	family
Urocanase_C	PF17392.2	gi|297621286|ref|YP_003709423.1|	-	4.5e-90	300.4	0.0	8.5e-90	299.5	0.0	1.5	1	0	0	1	1	1	1	Urocanase	C-terminal	domain
Urocanase	PF01175.18	gi|297621286|ref|YP_003709423.1|	-	2.1e-81	272.6	0.0	2.9e-81	272.1	0.0	1.2	1	0	0	1	1	1	1	Urocanase	Rossmann-like	domain
Urocanase_N	PF17391.2	gi|297621286|ref|YP_003709423.1|	-	5.4e-55	184.5	0.0	3e-54	182.1	0.0	2.2	3	0	0	3	3	3	1	Urocanase	N-terminal	domain
Lyase_aromatic	PF00221.19	gi|297621287|ref|YP_003709424.1|	-	5.2e-176	585.9	0.8	5.9e-176	585.7	0.8	1.0	1	0	0	1	1	1	1	Aromatic	amino	acid	lyase
DUF5082	PF16888.5	gi|297621288|ref|YP_003709425.1|	-	0.047	14.0	0.4	11	6.4	0.1	2.7	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF5082)
FAS_N	PF17828.1	gi|297621289|ref|YP_003709426.1|	-	0.017	15.1	0.3	0.021	14.8	0.3	1.1	1	0	0	1	1	1	0	N-terminal	domain	in	fatty	acid	synthase	subunit	beta
P4Ha_N	PF08336.11	gi|297621289|ref|YP_003709426.1|	-	0.031	14.3	2.3	0.064	13.3	2.3	1.5	1	1	0	1	1	1	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
Syntaxin_2	PF14523.6	gi|297621289|ref|YP_003709426.1|	-	0.052	13.9	2.6	0.21	12.0	2.6	1.9	1	1	0	1	1	1	0	Syntaxin-like	protein
GP24_25	PF17388.2	gi|297621289|ref|YP_003709426.1|	-	0.17	11.9	5.1	0.36	10.8	5.1	1.7	1	1	0	1	1	1	0	Tail	assembly	gene	products	24	&	25
ApoB100_C	PF12491.8	gi|297621289|ref|YP_003709426.1|	-	8.8	6.4	7.2	6.9	6.7	0.3	3.2	3	1	1	4	4	4	0	Apolipoprotein	B100	C	terminal
PBP	PF01161.20	gi|297621290|ref|YP_003709427.1|	-	2.8e-32	111.8	0.0	3.2e-32	111.6	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
RibD_C	PF01872.17	gi|297621291|ref|YP_003709428.1|	-	5.9e-45	153.6	0.0	7.5e-45	153.2	0.0	1.1	1	0	0	1	1	1	1	RibD	C-terminal	domain
dCMP_cyt_deam_1	PF00383.23	gi|297621291|ref|YP_003709428.1|	-	3e-19	68.8	0.0	5.6e-19	67.9	0.0	1.5	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
MafB19-deam	PF14437.6	gi|297621291|ref|YP_003709428.1|	-	3.7e-10	39.7	0.0	5.7e-10	39.1	0.0	1.3	1	0	0	1	1	1	1	MafB19-like	deaminase
Inv-AAD	PF18785.1	gi|297621291|ref|YP_003709428.1|	-	0.00014	21.8	0.0	0.00027	20.8	0.0	1.6	1	0	0	1	1	1	1	Invertebrate-AID/APOBEC-deaminase
PHD_Oberon	PF07227.11	gi|297621291|ref|YP_003709428.1|	-	0.11	12.4	0.0	1.9	8.4	0.0	2.1	2	0	0	2	2	2	0	PHD	-	plant	homeodomain	finger	protein
APOBEC_N	PF08210.11	gi|297621291|ref|YP_003709428.1|	-	0.17	11.7	0.0	0.29	11.0	0.0	1.3	1	0	0	1	1	1	0	APOBEC-like	N-terminal	domain
AMP-binding	PF00501.28	gi|297621292|ref|YP_003709429.1|	-	1.2e-94	317.4	0.0	1.5e-94	317.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|297621292|ref|YP_003709429.1|	-	5.3e-25	88.2	0.3	1.7e-24	86.6	0.1	1.9	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
ACAS_N	PF16177.5	gi|297621292|ref|YP_003709429.1|	-	3.2e-16	59.0	5.3	8.8e-16	57.6	3.7	2.3	2	0	0	2	2	2	1	Acetyl-coenzyme	A	synthetase	N-terminus
Syntaxin_2	PF14523.6	gi|297621293|ref|YP_003709430.1|	-	0.069	13.5	0.7	9.1	6.7	0.0	2.7	2	0	0	2	2	2	0	Syntaxin-like	protein
PDZ_1	PF12812.7	gi|297621293|ref|YP_003709430.1|	-	0.14	12.2	0.0	0.32	11.0	0.0	1.6	1	0	0	1	1	1	0	PDZ-like	domain
YtxH	PF12732.7	gi|297621293|ref|YP_003709430.1|	-	0.84	10.2	4.7	0.43	11.2	1.5	2.1	2	1	0	2	2	2	0	YtxH-like	protein
Zn_Tnp_IS1	PF03811.13	gi|297621294|ref|YP_003709431.1|	-	0.00026	20.6	3.0	0.00035	20.2	3.0	1.2	1	0	0	1	1	1	1	InsA	N-terminal	domain
Zn-ribbon_8	PF09723.10	gi|297621294|ref|YP_003709431.1|	-	0.0024	17.9	1.1	1.5	9.0	0.1	2.2	2	0	0	2	2	2	2	Zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|297621294|ref|YP_003709431.1|	-	0.0027	18.3	1.6	0.23	12.1	0.2	2.2	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF2387	PF09526.10	gi|297621294|ref|YP_003709431.1|	-	0.0084	16.2	0.4	0.011	15.9	0.4	1.1	1	0	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
zf-C2H2_11	PF16622.5	gi|297621294|ref|YP_003709431.1|	-	0.0094	15.7	1.6	0.013	15.3	0.1	1.9	2	0	0	2	2	2	1	zinc-finger	C2H2-type
zf-C2H2_4	PF13894.6	gi|297621294|ref|YP_003709431.1|	-	0.013	16.3	2.2	2.7	9.1	0.1	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-Di19	PF05605.12	gi|297621294|ref|YP_003709431.1|	-	0.018	15.3	0.8	0.032	14.5	0.7	1.7	1	1	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
TF_Zn_Ribbon	PF08271.12	gi|297621294|ref|YP_003709431.1|	-	0.032	13.8	0.1	0.048	13.2	0.1	1.3	1	0	0	1	1	1	0	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.7	gi|297621294|ref|YP_003709431.1|	-	0.045	13.7	5.4	0.062	13.3	5.4	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
CxC7	PF18866.1	gi|297621294|ref|YP_003709431.1|	-	0.049	13.8	1.2	2.3	8.4	0.2	2.1	1	1	1	2	2	2	0	CxC7	like	cysteine	cluster	associated	with	KDZ	transposases
TackOD1	PF18551.1	gi|297621294|ref|YP_003709431.1|	-	0.051	13.3	1.3	0.093	12.4	1.3	1.5	1	1	0	1	1	1	0	Thaumarchaeal	output	domain	1
zinc_ribbon_4	PF13717.6	gi|297621294|ref|YP_003709431.1|	-	0.053	13.5	5.1	0.43	10.6	5.1	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.6	gi|297621294|ref|YP_003709431.1|	-	0.11	12.9	3.3	4.9	7.7	0.3	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-C2H2	PF00096.26	gi|297621294|ref|YP_003709431.1|	-	0.57	10.8	6.2	1.6	9.3	0.4	2.7	1	1	1	2	2	2	0	Zinc	finger,	C2H2	type
HRDC	PF00570.23	gi|297621295|ref|YP_003709432.1|	-	0.057	13.4	0.0	0.97	9.5	0.0	2.8	3	0	0	3	3	3	0	HRDC	domain
Pro_isomerase	PF00160.21	gi|297621296|ref|YP_003709433.1|	-	7.4e-50	169.3	0.4	8.8e-50	169.1	0.4	1.1	1	0	0	1	1	1	1	Cyclophilin	type	peptidyl-prolyl	cis-trans	isomerase/CLD
RrnaAD	PF00398.20	gi|297621297|ref|YP_003709434.1|	-	3.8e-11	42.6	0.0	5e-11	42.2	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.6	gi|297621297|ref|YP_003709434.1|	-	6.9e-11	42.7	0.0	1.3e-10	41.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297621297|ref|YP_003709434.1|	-	6.3e-09	36.5	0.0	1.1e-08	35.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297621297|ref|YP_003709434.1|	-	2.7e-06	27.3	0.0	3.5e-06	27.0	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|297621297|ref|YP_003709434.1|	-	7.3e-06	25.6	0.0	1.2e-05	25.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.12	gi|297621297|ref|YP_003709434.1|	-	2.5e-05	24.8	0.0	4.5e-05	24.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|297621297|ref|YP_003709434.1|	-	0.00011	22.0	0.0	0.00015	21.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_PK	PF05891.12	gi|297621297|ref|YP_003709434.1|	-	0.00011	21.8	0.0	0.00012	21.7	0.0	1.1	1	0	0	1	1	1	1	AdoMet	dependent	proline	di-methyltransferase
NodS	PF05401.11	gi|297621297|ref|YP_003709434.1|	-	0.00021	21.0	0.0	0.0003	20.5	0.0	1.1	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Ubie_methyltran	PF01209.18	gi|297621297|ref|YP_003709434.1|	-	0.0076	15.6	0.0	0.011	15.1	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PCMT	PF01135.19	gi|297621297|ref|YP_003709434.1|	-	0.027	14.2	0.0	0.039	13.7	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
TehB	PF03848.14	gi|297621297|ref|YP_003709434.1|	-	0.1	12.0	0.0	0.15	11.5	0.0	1.2	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
Tmemb_14	PF03647.13	gi|297621298|ref|YP_003709435.1|	-	6.7e-19	68.4	17.0	7.6e-19	68.2	17.0	1.0	1	0	0	1	1	1	1	Transmembrane	proteins	14C
DLH	PF01738.18	gi|297621299|ref|YP_003709436.1|	-	2.4e-40	138.4	0.1	2.9e-40	138.1	0.1	1.0	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Peptidase_S9	PF00326.21	gi|297621299|ref|YP_003709436.1|	-	9.8e-09	35.0	0.0	0.0017	17.9	0.0	2.3	1	1	0	2	2	2	2	Prolyl	oligopeptidase	family
BAAT_C	PF08840.11	gi|297621299|ref|YP_003709436.1|	-	5.6e-06	26.4	0.1	0.081	12.8	0.0	2.2	1	1	1	2	2	2	2	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_2	PF02230.16	gi|297621299|ref|YP_003709436.1|	-	6.9e-05	22.7	0.0	0.00011	22.1	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Hydrolase_4	PF12146.8	gi|297621299|ref|YP_003709436.1|	-	0.0036	16.6	0.2	0.083	12.1	0.0	2.2	1	1	1	2	2	2	1	Serine	aminopeptidase,	S33
AXE1	PF05448.12	gi|297621299|ref|YP_003709436.1|	-	0.0057	15.4	0.2	0.023	13.4	0.1	2.0	2	1	0	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
DUF4019	PF13211.6	gi|297621300|ref|YP_003709437.1|	-	2.6e-35	120.9	0.1	3.1e-35	120.7	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4019)
DUF3887	PF13026.6	gi|297621300|ref|YP_003709437.1|	-	0.00047	20.9	0.0	0.00069	20.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3887)
MS_channel	PF00924.18	gi|297621301|ref|YP_003709438.1|	-	1.2e-50	172.0	2.4	2.4e-50	171.0	2.4	1.6	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
YajC	PF02699.15	gi|297621301|ref|YP_003709438.1|	-	0.045	13.6	1.9	0.083	12.8	0.2	2.4	2	0	0	2	2	2	0	Preprotein	translocase	subunit
CPP1-like	PF11833.8	gi|297621301|ref|YP_003709438.1|	-	2	8.0	4.8	0.35	10.5	0.6	1.8	2	0	0	2	2	2	0	Protein	CHAPERONE-LIKE	PROTEIN	OF	POR1-like
Glycos_transf_N	PF04413.16	gi|297621302|ref|YP_003709439.1|	-	2.7e-51	173.7	0.0	3.8e-51	173.2	0.0	1.2	1	0	0	1	1	1	1	3-Deoxy-D-manno-octulosonic-acid	transferase	(kdotransferase)
Epimerase_2	PF02350.19	gi|297621302|ref|YP_003709439.1|	-	0.00097	18.1	0.0	0.0018	17.2	0.0	1.4	1	0	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glycos_transf_1	PF00534.20	gi|297621302|ref|YP_003709439.1|	-	0.0031	17.1	0.0	0.0069	15.9	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
PP2C_2	PF13672.6	gi|297621303|ref|YP_003709440.1|	-	0.00037	20.2	0.0	0.00096	18.8	0.0	1.6	1	1	0	1	1	1	1	Protein	phosphatase	2C
SpoIIE	PF07228.12	gi|297621303|ref|YP_003709440.1|	-	0.0074	16.2	0.2	0.024	14.6	0.1	2.0	1	1	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
RsbU_N	PF08673.10	gi|297621303|ref|YP_003709440.1|	-	0.13	12.3	0.2	0.34	11.0	0.2	1.6	1	0	0	1	1	1	0	Phosphoserine	phosphatase	RsbU,	N-terminal	domain
MscS_porin	PF12795.7	gi|297621304|ref|YP_003709441.1|	-	0.0046	16.5	0.2	0.0046	16.5	0.2	2.0	2	0	0	2	2	2	1	Mechanosensitive	ion	channel	porin	domain
She9_MDM33	PF05546.11	gi|297621304|ref|YP_003709441.1|	-	0.012	15.4	1.9	0.57	9.9	0.0	2.4	2	0	0	2	2	2	0	She9	/	Mdm33	family
SpoIIE	PF07228.12	gi|297621304|ref|YP_003709441.1|	-	0.028	14.3	0.0	0.073	13.0	0.0	1.7	1	1	0	1	1	1	0	Stage	II	sporulation	protein	E	(SpoIIE)
DUF4302	PF14135.6	gi|297621304|ref|YP_003709441.1|	-	0.052	13.5	0.1	0.1	12.5	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4302)
CC2-LZ	PF16516.5	gi|297621304|ref|YP_003709441.1|	-	0.065	13.6	2.1	0.11	12.9	0.2	2.3	2	0	0	2	2	2	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
DUF3662	PF12401.8	gi|297621304|ref|YP_003709441.1|	-	0.099	13.0	0.0	0.33	11.3	0.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2662)
SDH_alpha	PF03313.15	gi|297621305|ref|YP_003709442.1|	-	1.8e-98	329.4	9.4	2.2e-98	329.1	9.4	1.1	1	0	0	1	1	1	1	Serine	dehydratase	alpha	chain
SDH_beta	PF03315.15	gi|297621305|ref|YP_003709442.1|	-	1.3e-57	194.5	0.1	5.6e-57	192.5	0.0	2.0	2	0	0	2	2	2	1	Serine	dehydratase	beta	chain
DUF4760	PF15956.5	gi|297621305|ref|YP_003709442.1|	-	0.013	15.6	0.0	0.026	14.7	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4760)
Peptidase_S9	PF00326.21	gi|297621306|ref|YP_003709443.1|	-	2.8e-17	62.9	0.1	5.4e-17	62.0	0.0	1.5	1	1	0	1	1	1	1	Prolyl	oligopeptidase	family
Hydrolase_4	PF12146.8	gi|297621306|ref|YP_003709443.1|	-	4e-14	52.5	0.1	7.5e-11	41.8	0.0	2.1	1	1	1	2	2	2	2	Serine	aminopeptidase,	S33
Abhydrolase_1	PF00561.20	gi|297621306|ref|YP_003709443.1|	-	1.3e-11	44.6	0.1	5.8e-09	36.0	0.0	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Peptidase_S15	PF02129.18	gi|297621306|ref|YP_003709443.1|	-	9.2e-09	35.3	0.0	1.6e-08	34.5	0.0	1.3	1	1	0	1	1	1	1	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_3	PF07859.13	gi|297621306|ref|YP_003709443.1|	-	2.8e-07	30.6	0.0	3.8e-07	30.2	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
AXE1	PF05448.12	gi|297621306|ref|YP_003709443.1|	-	3e-07	29.4	0.0	0.00012	20.9	0.0	2.2	1	1	1	2	2	2	2	Acetyl	xylan	esterase	(AXE1)
BAAT_C	PF08840.11	gi|297621306|ref|YP_003709443.1|	-	2.2e-06	27.8	0.0	1.1e-05	25.5	0.0	1.9	1	1	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
DLH	PF01738.18	gi|297621306|ref|YP_003709443.1|	-	9.6e-06	25.3	0.1	0.017	14.7	0.0	2.4	3	0	0	3	3	3	2	Dienelactone	hydrolase	family
Abhydrolase_6	PF12697.7	gi|297621306|ref|YP_003709443.1|	-	9.8e-06	26.3	0.0	6.8e-05	23.6	0.0	1.9	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_2	PF02230.16	gi|297621306|ref|YP_003709443.1|	-	2.4e-05	24.2	1.3	0.075	12.8	0.0	3.1	3	0	0	3	3	3	2	Phospholipase/Carboxylesterase
DUF1100	PF06500.11	gi|297621306|ref|YP_003709443.1|	-	0.00029	19.7	0.0	0.00041	19.3	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1100)
PAF-AH_p_II	PF03403.13	gi|297621306|ref|YP_003709443.1|	-	0.0011	17.5	0.3	0.1	11.1	0.0	2.2	2	0	0	2	2	2	2	Platelet-activating	factor	acetylhydrolase,	isoform	II
PFK	PF00365.20	gi|297621307|ref|YP_003709444.1|	-	9.8e-38	130.1	0.6	5.6e-37	127.6	0.5	2.1	3	0	0	3	3	3	1	Phosphofructokinase
Sialidase	PF02973.16	gi|297621308|ref|YP_003709445.1|	-	0.025	14.1	0.7	0.044	13.3	0.1	1.7	2	0	0	2	2	2	0	Sialidase,	N-terminal	domain
DMRL_synthase	PF00885.19	gi|297621310|ref|YP_003709447.1|	-	8.8e-56	187.7	1.3	1e-55	187.5	1.3	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
RNA_pol_inhib	PF16857.5	gi|297621310|ref|YP_003709447.1|	-	0.041	13.7	0.1	5.9	6.8	0.0	2.7	2	1	0	2	2	2	0	RNA	polymerase	inhibitor
DHBP_synthase	PF00926.19	gi|297621311|ref|YP_003709448.1|	-	5.9e-83	277.1	0.0	7.6e-83	276.8	0.0	1.1	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
GTP_cyclohydro2	PF00925.20	gi|297621311|ref|YP_003709448.1|	-	3.5e-71	238.1	0.0	5.3e-71	237.5	0.0	1.2	1	0	0	1	1	1	1	GTP	cyclohydrolase	II
Virul_fac_BrkB	PF03631.15	gi|297621313|ref|YP_003709450.1|	-	4e-51	174.1	26.0	4.9e-51	173.8	26.0	1.1	1	0	0	1	1	1	1	Virulence	factor	BrkB
Rrf2	PF02082.20	gi|297621313|ref|YP_003709450.1|	-	0.0058	17.0	0.1	0.011	16.0	0.1	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
Ribosomal_S25	PF03297.15	gi|297621313|ref|YP_003709450.1|	-	0.0062	16.7	0.0	0.013	15.6	0.0	1.5	1	0	0	1	1	1	1	S25	ribosomal	protein
Bro-N	PF02498.17	gi|297621314|ref|YP_003709451.1|	-	1.2e-07	32.3	0.0	1.5e-07	32.0	0.0	1.1	1	0	0	1	1	1	1	BRO	family,	N-terminal	domain
P22_AR_N	PF10547.9	gi|297621314|ref|YP_003709451.1|	-	0.035	14.4	0.0	0.042	14.2	0.0	1.1	1	0	0	1	1	1	0	P22_AR	N-terminal	domain
Cas3_C	PF18395.1	gi|297621315|ref|YP_003709452.1|	-	0.0083	16.6	1.4	0.041	14.4	0.6	2.4	1	1	2	3	3	3	1	Cas3	C-terminal	domain
T6SS_TssF	PF05947.12	gi|297621315|ref|YP_003709452.1|	-	0.0093	14.5	0.1	0.011	14.3	0.1	1.1	1	0	0	1	1	1	1	Type	VI	secretion	system,	TssF
MazG-like	PF12643.7	gi|297621315|ref|YP_003709452.1|	-	0.086	13.1	0.1	0.51	10.6	0.1	2.1	2	0	0	2	2	2	0	MazG-like	family
CoiA	PF06054.11	gi|297621316|ref|YP_003709453.1|	-	0.00042	19.6	4.1	0.00042	19.6	4.1	2.4	2	1	0	2	2	2	2	Competence	protein	CoiA-like	family
zinc_ribbon_11	PF11682.8	gi|297621316|ref|YP_003709453.1|	-	0.087	12.8	0.1	0.087	12.8	0.1	2.1	2	0	0	2	2	2	0	Probable	zinc-ribbon
Apis_Csd	PF11671.8	gi|297621316|ref|YP_003709453.1|	-	0.61	10.1	4.7	1.1	9.2	4.7	1.5	1	0	0	1	1	1	0	Complementary	sex	determiner	protein
DDE_Tnp_1_assoc	PF13808.6	gi|297621317|ref|YP_003709454.1|	-	3.8e-27	94.1	0.2	2e-26	91.9	0.1	2.1	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.21	gi|297621317|ref|YP_003709454.1|	-	1.6e-18	67.2	0.0	3.6e-18	66.0	0.0	1.5	1	1	0	1	1	1	1	Transposase	DDE	domain
DEK_C	PF08766.11	gi|297621317|ref|YP_003709454.1|	-	0.017	15.0	0.0	0.032	14.1	0.0	1.5	1	0	0	1	1	1	0	DEK	C	terminal	domain
DDE_Tnp_1_4	PF13701.6	gi|297621317|ref|YP_003709454.1|	-	0.05	11.9	0.0	3	6.0	0.0	2.1	2	0	0	2	2	2	0	Transposase	DDE	domain	group	1
Transposase_mut	PF00872.18	gi|297621318|ref|YP_003709455.1|	-	1.4e-05	24.1	0.0	1.9e-05	23.7	0.0	1.2	1	0	0	1	1	1	1	Transposase,	Mutator	family
Transposase_mut	PF00872.18	gi|297621319|ref|YP_003709456.1|	-	2.5e-11	43.0	0.0	2.7e-11	42.9	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
DDE_Tnp_IS240	PF13610.6	gi|297621319|ref|YP_003709456.1|	-	0.013	15.7	0.0	0.014	15.7	0.0	1.1	1	0	0	1	1	1	0	DDE	domain
HicB_lk_antitox	PF15919.5	gi|297621320|ref|YP_003709457.1|	-	0.031	14.4	0.0	0.04	14.0	0.0	1.3	1	0	0	1	1	1	0	HicB_like	antitoxin	of	bacterial	toxin-antitoxin	system
HicA_toxin	PF07927.12	gi|297621321|ref|YP_003709458.1|	-	2.5e-09	37.0	0.0	3.3e-09	36.6	0.0	1.1	1	0	0	1	1	1	1	HicA	toxin	of	bacterial	toxin-antitoxin,
ABC_tran	PF00005.27	gi|297621324|ref|YP_003709461.1|	-	1.2e-34	119.8	0.0	1.9e-34	119.2	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
G-alpha	PF00503.20	gi|297621324|ref|YP_003709461.1|	-	0.00013	21.3	0.1	0.00021	20.6	0.1	1.3	1	1	0	1	1	1	1	G-protein	alpha	subunit
Zeta_toxin	PF06414.12	gi|297621324|ref|YP_003709461.1|	-	0.00026	20.3	0.0	0.00059	19.2	0.0	1.6	2	0	0	2	2	1	1	Zeta	toxin
RsgA_GTPase	PF03193.16	gi|297621324|ref|YP_003709461.1|	-	0.00039	20.4	0.1	0.00099	19.1	0.1	1.7	1	0	0	1	1	1	1	RsgA	GTPase
AAA_16	PF13191.6	gi|297621324|ref|YP_003709461.1|	-	0.00067	20.1	0.0	0.001	19.5	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.19	gi|297621324|ref|YP_003709461.1|	-	0.00096	18.6	0.2	0.073	12.5	0.2	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|297621324|ref|YP_003709461.1|	-	0.001	18.9	0.5	0.0014	18.4	0.5	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
NACHT	PF05729.12	gi|297621324|ref|YP_003709461.1|	-	0.0014	18.6	0.1	0.0035	17.3	0.1	1.6	1	0	0	1	1	1	1	NACHT	domain
AAA_25	PF13481.6	gi|297621324|ref|YP_003709461.1|	-	0.0016	18.1	0.4	0.041	13.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
PduV-EutP	PF10662.9	gi|297621324|ref|YP_003709461.1|	-	0.0042	16.8	0.1	0.0092	15.7	0.1	1.6	1	0	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_30	PF13604.6	gi|297621324|ref|YP_003709461.1|	-	0.0049	16.6	0.0	0.0098	15.6	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.14	gi|297621324|ref|YP_003709461.1|	-	0.0059	16.6	0.0	0.015	15.3	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_23	PF13476.6	gi|297621324|ref|YP_003709461.1|	-	0.011	16.2	1.1	0.031	14.8	1.1	2.1	1	1	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|297621324|ref|YP_003709461.1|	-	0.017	14.8	0.0	0.021	14.5	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_29	PF13555.6	gi|297621324|ref|YP_003709461.1|	-	0.019	14.7	0.3	0.043	13.5	0.3	1.6	1	1	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.6	gi|297621324|ref|YP_003709461.1|	-	0.022	15.3	0.3	0.042	14.4	0.1	1.9	2	1	0	2	2	1	0	AAA	domain
AAA	PF00004.29	gi|297621324|ref|YP_003709461.1|	-	0.026	14.9	0.1	0.1	13.0	0.1	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DLIC	PF05783.11	gi|297621324|ref|YP_003709461.1|	-	0.03	13.2	0.0	0.043	12.6	0.0	1.1	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
AAA_19	PF13245.6	gi|297621324|ref|YP_003709461.1|	-	0.03	14.6	0.0	0.078	13.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.6	gi|297621324|ref|YP_003709461.1|	-	0.034	14.2	0.1	0.15	12.1	0.0	2.1	3	0	0	3	3	1	0	AAA	domain
cobW	PF02492.19	gi|297621324|ref|YP_003709461.1|	-	0.042	13.4	0.2	0.081	12.5	0.1	1.6	2	0	0	2	2	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_21	PF13304.6	gi|297621324|ref|YP_003709461.1|	-	0.044	13.6	0.2	0.1	12.4	0.1	1.6	2	0	0	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
Mg_chelatase	PF01078.21	gi|297621324|ref|YP_003709461.1|	-	0.048	13.0	0.0	0.1	12.0	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Rad17	PF03215.15	gi|297621324|ref|YP_003709461.1|	-	0.048	13.6	0.0	0.09	12.7	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
RNA_helicase	PF00910.22	gi|297621324|ref|YP_003709461.1|	-	0.048	14.0	0.0	0.2	12.1	0.0	2.0	3	0	0	3	3	2	0	RNA	helicase
KAP_NTPase	PF07693.14	gi|297621324|ref|YP_003709461.1|	-	0.049	12.9	0.0	0.084	12.1	0.0	1.6	1	1	0	1	1	1	0	KAP	family	P-loop	domain
NB-ARC	PF00931.22	gi|297621324|ref|YP_003709461.1|	-	0.051	12.8	0.0	0.12	11.5	0.0	1.6	1	0	0	1	1	1	0	NB-ARC	domain
PIF1	PF05970.14	gi|297621324|ref|YP_003709461.1|	-	0.052	12.7	0.1	0.26	10.4	0.0	2.0	2	1	1	3	3	3	0	PIF1-like	helicase
AAA_22	PF13401.6	gi|297621324|ref|YP_003709461.1|	-	0.052	13.8	0.0	0.17	12.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
DUF815	PF05673.13	gi|297621324|ref|YP_003709461.1|	-	0.053	12.7	0.1	0.13	11.4	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
Sigma54_activat	PF00158.26	gi|297621324|ref|YP_003709461.1|	-	0.064	12.9	0.0	0.28	10.9	0.0	1.9	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_28	PF13521.6	gi|297621324|ref|YP_003709461.1|	-	0.085	13.1	0.2	0.17	12.1	0.1	1.6	2	0	0	2	2	1	0	AAA	domain
T2SSE	PF00437.20	gi|297621324|ref|YP_003709461.1|	-	0.091	11.8	0.2	0.16	11.0	0.2	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
CoA_trans	PF01144.23	gi|297621324|ref|YP_003709461.1|	-	0.096	12.1	0.0	0.14	11.5	0.0	1.3	1	0	0	1	1	1	0	Coenzyme	A	transferase
AAA_24	PF13479.6	gi|297621324|ref|YP_003709461.1|	-	0.097	12.4	0.5	0.21	11.3	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
TsaE	PF02367.17	gi|297621324|ref|YP_003709461.1|	-	0.13	12.3	0.0	0.23	11.4	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
APS_kinase	PF01583.20	gi|297621324|ref|YP_003709461.1|	-	0.13	12.1	0.0	0.22	11.4	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
OpuAC	PF04069.12	gi|297621325|ref|YP_003709462.1|	-	2e-53	181.6	0.0	2.6e-53	181.2	0.0	1.1	1	0	0	1	1	1	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
BPD_transp_1	PF00528.22	gi|297621325|ref|YP_003709462.1|	-	1.7e-20	73.5	15.9	3.7e-20	72.4	15.9	1.5	1	1	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
NCBP3	PF10309.9	gi|297621325|ref|YP_003709462.1|	-	0.13	12.2	0.1	0.28	11.1	0.1	1.5	1	0	0	1	1	1	0	Nuclear	cap-binding	protein	subunit	3
LemA	PF04011.12	gi|297621326|ref|YP_003709463.1|	-	5.8e-57	191.7	1.2	7.4e-57	191.4	1.2	1.1	1	0	0	1	1	1	1	LemA	family
DUF3426	PF11906.8	gi|297621326|ref|YP_003709463.1|	-	0.039	14.1	2.6	0.98	9.6	0.4	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3426)
Peptidase_M48	PF01435.18	gi|297621327|ref|YP_003709464.1|	-	1.8e-34	119.3	0.1	4e-34	118.1	0.0	1.6	2	0	0	2	2	2	1	Peptidase	family	M48
Peptidase_M56	PF05569.11	gi|297621327|ref|YP_003709464.1|	-	0.0015	17.8	0.0	0.0027	16.9	0.0	1.5	1	0	0	1	1	1	1	BlaR1	peptidase	M56
DUF872	PF05915.12	gi|297621327|ref|YP_003709464.1|	-	0.0073	16.5	0.1	1.3	9.2	0.1	2.5	2	0	0	2	2	2	1	Eukaryotic	protein	of	unknown	function	(DUF872)
DUF1772	PF08592.11	gi|297621327|ref|YP_003709464.1|	-	0.042	14.2	2.5	1.2	9.5	0.3	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1772)
DUF2243	PF10002.9	gi|297621327|ref|YP_003709464.1|	-	0.073	13.2	3.1	0.087	12.9	1.7	1.8	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2243)
Peptidase_M1	PF01433.20	gi|297621327|ref|YP_003709464.1|	-	0.21	11.2	0.0	0.34	10.4	0.0	1.3	1	0	0	1	1	1	0	Peptidase	family	M1	domain
DUF2207	PF09972.9	gi|297621327|ref|YP_003709464.1|	-	0.49	9.1	4.6	2.7	6.6	0.5	2.1	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2207)
Phage_holin_3_6	PF07332.11	gi|297621327|ref|YP_003709464.1|	-	9	6.4	9.9	5.1	7.2	3.9	2.2	2	0	0	2	2	2	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
DoxX	PF07681.12	gi|297621328|ref|YP_003709465.1|	-	3.5e-19	69.2	6.3	5.1e-19	68.6	6.3	1.3	1	0	0	1	1	1	1	DoxX
DoxX_2	PF13564.6	gi|297621328|ref|YP_003709465.1|	-	1.2e-06	28.6	2.1	1.4e-06	28.3	2.1	1.2	1	0	0	1	1	1	1	DoxX-like	family
DoxD	PF04173.13	gi|297621328|ref|YP_003709465.1|	-	2.4e-06	27.6	4.4	9.2e-06	25.7	1.1	2.3	1	1	0	2	2	2	1	TQO	small	subunit	DoxD
SURF4	PF02077.15	gi|297621328|ref|YP_003709465.1|	-	0.037	13.6	0.3	0.065	12.8	0.3	1.4	1	0	0	1	1	1	0	SURF4	family
DUF2935	PF11155.8	gi|297621330|ref|YP_003709467.1|	-	0.0023	18.2	1.8	0.034	14.5	0.3	3.3	1	1	2	3	3	3	1	Domain	of	unknown	function	(DUF2935)
CdvA	PF18822.1	gi|297621330|ref|YP_003709467.1|	-	0.049	13.5	0.7	0.049	13.5	0.7	4.5	7	1	1	8	8	8	0	CdvA-like	coiled-coil	domain
DUF4349	PF14257.6	gi|297621330|ref|YP_003709467.1|	-	0.68	9.3	4.6	0.34	10.3	0.5	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4349)
YebG	PF07130.12	gi|297621330|ref|YP_003709467.1|	-	1	9.3	7.2	6.4	6.7	0.3	4.0	4	0	0	4	4	4	0	YebG	protein
Vps51	PF08700.11	gi|297621330|ref|YP_003709467.1|	-	2.7	8.1	7.5	34	4.6	0.0	4.6	5	0	0	5	5	5	0	Vps51/Vps67
YlqD	PF11068.8	gi|297621330|ref|YP_003709467.1|	-	2.8	8.3	15.1	13	6.2	1.8	4.4	4	1	0	4	4	4	0	YlqD	protein
DivIC	PF04977.15	gi|297621330|ref|YP_003709467.1|	-	6.4	6.6	9.9	2.7	7.8	0.3	4.1	5	0	0	5	5	5	0	Septum	formation	initiator
Spc7	PF08317.11	gi|297621330|ref|YP_003709467.1|	-	6.7	5.5	22.9	0.037	12.9	1.5	3.6	3	2	1	4	4	4	0	Spc7	kinetochore	protein
DUF1664	PF07889.12	gi|297621330|ref|YP_003709467.1|	-	9.9	6.2	10.1	19	5.3	0.3	4.2	3	2	3	6	6	6	0	Protein	of	unknown	function	(DUF1664)
GH97_C	PF14509.6	gi|297621331|ref|YP_003709468.1|	-	0.13	12.5	0.1	24	5.3	0.0	2.4	1	1	1	2	2	2	0	Glycosyl-hydrolase	97	C-terminal,	oligomerisation
Cation_efflux	PF01545.21	gi|297621332|ref|YP_003709469.1|	-	6.7e-32	110.8	9.8	7.9e-32	110.6	9.8	1.1	1	0	0	1	1	1	1	Cation	efflux	family
ZT_dimer	PF16916.5	gi|297621332|ref|YP_003709469.1|	-	2.8e-19	69.0	0.3	4.8e-19	68.3	0.3	1.4	1	0	0	1	1	1	1	Dimerisation	domain	of	Zinc	Transporter
Peptidase_U4	PF03419.13	gi|297621332|ref|YP_003709469.1|	-	8.8	5.5	7.5	5.6	6.2	2.8	2.0	1	1	0	2	2	2	0	Sporulation	factor	SpoIIGA
CTP_transf_3	PF02348.19	gi|297621333|ref|YP_003709470.1|	-	3.1e-51	174.4	0.0	3.9e-51	174.1	0.0	1.0	1	0	0	1	1	1	1	Cytidylyltransferase
NTP_transf_3	PF12804.7	gi|297621333|ref|YP_003709470.1|	-	7.7e-07	29.6	0.0	1.1e-06	29.1	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_synth_N	PF06418.14	gi|297621334|ref|YP_003709471.1|	-	2e-121	404.3	0.0	2.7e-121	403.9	0.0	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.28	gi|297621334|ref|YP_003709471.1|	-	3.3e-55	186.8	0.2	8e-55	185.6	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|297621334|ref|YP_003709471.1|	-	3.9e-09	36.6	0.2	1.6e-08	34.6	0.1	2.0	2	1	0	2	2	2	1	Peptidase	C26
CbiA	PF01656.23	gi|297621334|ref|YP_003709471.1|	-	0.00061	19.8	0.0	0.0013	18.8	0.0	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.15	gi|297621334|ref|YP_003709471.1|	-	0.049	12.8	0.0	0.15	11.2	0.0	1.7	1	1	1	2	2	2	0	Anion-transporting	ATPase
RuvX	PF03652.15	gi|297621335|ref|YP_003709472.1|	-	5.2e-41	140.2	0.3	6e-41	140.0	0.3	1.0	1	0	0	1	1	1	1	Holliday	junction	resolvase
ROK	PF00480.20	gi|297621335|ref|YP_003709472.1|	-	0.0018	17.8	0.1	0.0022	17.5	0.1	1.1	1	0	0	1	1	1	1	ROK	family
ATG101	PF07855.12	gi|297621335|ref|YP_003709472.1|	-	0.084	12.9	0.2	0.1	12.6	0.2	1.1	1	0	0	1	1	1	0	Autophagy-related	protein	101
EVE	PF01878.18	gi|297621336|ref|YP_003709473.1|	-	5.3e-52	175.7	0.1	5.8e-52	175.6	0.1	1.0	1	0	0	1	1	1	1	EVE	domain
GATase_4	PF13230.6	gi|297621337|ref|YP_003709474.1|	-	8.7e-21	74.0	0.1	4.2e-20	71.8	0.0	1.8	1	1	1	2	2	2	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.6	gi|297621337|ref|YP_003709474.1|	-	2.8e-14	53.4	0.0	6.3e-14	52.3	0.0	1.5	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|297621337|ref|YP_003709474.1|	-	0.13	12.1	0.0	0.41	10.6	0.0	1.8	2	0	0	2	2	2	0	Glutamine	amidotransferase	domain
RimK	PF08443.11	gi|297621338|ref|YP_003709475.1|	-	2.5e-41	141.4	0.0	3.2e-41	141.0	0.0	1.1	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
Rimk_N	PF18030.1	gi|297621338|ref|YP_003709475.1|	-	2.5e-18	66.3	0.0	4.6e-18	65.4	0.0	1.4	1	0	0	1	1	1	1	RimK	PreATP-grasp	domain
GSH-S_ATP	PF02955.16	gi|297621338|ref|YP_003709475.1|	-	3e-14	52.8	0.0	2.3e-13	49.9	0.0	2.0	2	0	0	2	2	2	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_ST	PF14397.6	gi|297621338|ref|YP_003709475.1|	-	1e-08	34.8	0.1	0.00027	20.3	0.0	2.3	2	0	0	2	2	2	2	Sugar-transfer	associated	ATP-grasp
ATP-grasp_3	PF02655.14	gi|297621338|ref|YP_003709475.1|	-	4.9e-07	29.9	0.0	8.2e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.22	gi|297621338|ref|YP_003709475.1|	-	5e-05	22.9	0.0	9.7e-05	22.0	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|297621338|ref|YP_003709475.1|	-	8.7e-05	22.1	0.0	0.00022	20.8	0.0	1.7	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
TTL	PF03133.15	gi|297621338|ref|YP_003709475.1|	-	0.0014	17.9	0.0	1.1	8.3	0.0	2.3	2	0	0	2	2	2	2	Tubulin-tyrosine	ligase	family
ATPgrasp_YheCD	PF14398.6	gi|297621338|ref|YP_003709475.1|	-	0.003	16.8	0.1	1.4	8.1	0.0	2.7	1	1	1	2	2	2	2	YheC/D	like	ATP-grasp
Synapsin_C	PF02750.14	gi|297621338|ref|YP_003709475.1|	-	0.0067	16.0	0.0	0.0091	15.5	0.0	1.2	1	0	0	1	1	1	1	Synapsin,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.13	gi|297621338|ref|YP_003709475.1|	-	0.012	15.1	0.1	0.15	11.5	0.1	2.1	1	1	0	1	1	1	0	D-ala	D-ala	ligase	C-terminus
ATP-grasp_4	PF13535.6	gi|297621338|ref|YP_003709475.1|	-	0.018	14.7	0.0	0.035	13.7	0.0	1.5	1	0	0	1	1	1	0	ATP-grasp	domain
GARS_A	PF01071.19	gi|297621338|ref|YP_003709475.1|	-	0.057	13.2	0.0	0.095	12.5	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
Ins134_P3_kin	PF05770.11	gi|297621338|ref|YP_003709475.1|	-	0.058	12.9	0.1	14	5.2	0.0	2.6	2	1	0	3	3	3	0	Inositol	1,3,4-trisphosphate	5/6-kinase	ATP-grasp	domain
Transposase_mut	PF00872.18	gi|297621339|ref|YP_003709476.1|	-	1.8e-71	241.0	0.0	2.2e-71	240.7	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297621339|ref|YP_003709476.1|	-	1.4e-05	25.4	0.0	5e-05	23.6	0.0	2.0	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.6	gi|297621339|ref|YP_003709476.1|	-	0.027	14.7	0.2	0.27	11.5	0.0	2.7	2	1	0	2	2	2	0	DDE	domain
HMG_CoA_synt_C	PF08540.10	gi|297621341|ref|YP_003709478.1|	-	4.2e-21	75.8	0.3	6.4e-11	42.4	0.1	2.2	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
HMG_CoA_synt_N	PF01154.17	gi|297621341|ref|YP_003709478.1|	-	6.5e-16	58.7	0.0	1.3e-15	57.7	0.0	1.5	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
FMN_dh	PF01070.18	gi|297621342|ref|YP_003709479.1|	-	1.2e-23	83.7	0.2	8.3e-15	54.7	0.2	2.1	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
Glu_synthase	PF01645.17	gi|297621342|ref|YP_003709479.1|	-	0.019	14.1	0.1	0.037	13.2	0.1	1.4	1	0	0	1	1	1	0	Conserved	region	in	glutamate	synthase
IMPDH	PF00478.25	gi|297621342|ref|YP_003709479.1|	-	0.034	13.2	2.8	0.49	9.3	0.1	2.8	2	1	1	3	3	3	0	IMP	dehydrogenase	/	GMP	reductase	domain
HMG-CoA_red	PF00368.18	gi|297621343|ref|YP_003709480.1|	-	8e-95	317.9	0.1	9.2e-95	317.7	0.1	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
MDD_C	PF18376.1	gi|297621344|ref|YP_003709481.1|	-	1.7e-10	41.0	0.0	2.6e-10	40.3	0.0	1.2	1	0	0	1	1	1	1	Mevalonate	5-diphosphate	decarboxylase	C-terminal	domain
GHMP_kinases_N	PF00288.26	gi|297621344|ref|YP_003709481.1|	-	0.00036	20.7	4.1	0.00095	19.4	4.1	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_N	PF00288.26	gi|297621345|ref|YP_003709482.1|	-	3e-09	37.0	0.4	6.2e-09	36.0	0.4	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|297621346|ref|YP_003709483.1|	-	3.2e-15	56.2	0.1	9.3e-15	54.8	0.1	1.8	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.26	gi|297621346|ref|YP_003709483.1|	-	2.3e-09	37.3	0.0	5.8e-09	36.1	0.0	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
ATPase_gene1	PF09527.10	gi|297621347|ref|YP_003709484.1|	-	3.8e-12	46.2	2.0	4.5e-12	45.9	2.0	1.1	1	0	0	1	1	1	1	Putative	F0F1-ATPase	subunit	Ca2+/Mg2+	transporter
DUF63	PF01889.17	gi|297621347|ref|YP_003709484.1|	-	0.018	15.2	0.6	0.022	14.9	0.6	1.0	1	0	0	1	1	1	0	Membrane	protein	of	unknown	function	DUF63
ATP-synt_A	PF00119.20	gi|297621348|ref|YP_003709485.1|	-	1.8e-49	168.6	21.6	2.3e-49	168.2	21.6	1.1	1	0	0	1	1	1	1	ATP	synthase	A	chain
Tmemb_18A	PF09771.9	gi|297621348|ref|YP_003709485.1|	-	0.21	12.0	1.7	0.61	10.5	0.1	2.3	2	0	0	2	2	2	0	Transmembrane	protein	188
ATP-synt_C	PF00137.21	gi|297621349|ref|YP_003709486.1|	-	3.1e-15	56.3	11.5	3.7e-15	56.0	11.5	1.1	1	0	0	1	1	1	1	ATP	synthase	subunit	C
ATP-synt_B	PF00430.18	gi|297621350|ref|YP_003709487.1|	-	5.8e-19	68.5	13.8	7.5e-19	68.1	13.8	1.1	1	0	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
Mt_ATP-synt_B	PF05405.14	gi|297621350|ref|YP_003709487.1|	-	0.0065	16.1	11.6	0.0081	15.8	11.6	1.1	1	0	0	1	1	1	1	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
FtsK_SpoIIIE	PF01580.18	gi|297621350|ref|YP_003709487.1|	-	0.015	14.6	0.6	0.02	14.3	0.6	1.2	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
OSCP	PF00213.18	gi|297621351|ref|YP_003709488.1|	-	1.8e-31	109.6	6.1	2e-31	109.4	6.1	1.0	1	0	0	1	1	1	1	ATP	synthase	delta	(OSCP)	subunit
ATP-synt_ab	PF00006.25	gi|297621352|ref|YP_003709489.1|	-	1.2e-67	227.7	0.0	1.6e-67	227.2	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.27	gi|297621352|ref|YP_003709489.1|	-	9.3e-42	142.3	2.5	1.5e-41	141.6	2.5	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.23	gi|297621352|ref|YP_003709489.1|	-	4e-14	52.9	0.7	8.2e-14	51.9	0.7	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
ATPase	PF06745.13	gi|297621352|ref|YP_003709489.1|	-	0.00011	21.6	0.2	0.00029	20.3	0.2	1.7	1	0	0	1	1	1	1	KaiC
AAA_14	PF13173.6	gi|297621352|ref|YP_003709489.1|	-	0.0047	17.0	0.5	0.013	15.5	0.1	2.1	2	1	0	2	2	2	1	AAA	domain
ATPase_2	PF01637.18	gi|297621352|ref|YP_003709489.1|	-	0.0069	16.3	0.1	0.04	13.8	0.0	2.0	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
RecA	PF00154.21	gi|297621352|ref|YP_003709489.1|	-	0.071	12.6	0.1	0.26	10.7	0.1	1.9	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
XPC-binding	PF09280.11	gi|297621352|ref|YP_003709489.1|	-	0.11	12.3	0.1	0.3	10.8	0.1	1.8	1	0	0	1	1	1	0	XPC-binding	domain
ATP-synt	PF00231.19	gi|297621353|ref|YP_003709490.1|	-	9.3e-73	245.4	4.8	1e-72	245.2	4.8	1.0	1	0	0	1	1	1	1	ATP	synthase
ATP-synt_ab	PF00006.25	gi|297621354|ref|YP_003709491.1|	-	1.1e-65	221.2	0.0	1.7e-65	220.7	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.23	gi|297621354|ref|YP_003709491.1|	-	1e-18	67.6	0.6	2.2e-18	66.5	0.2	1.8	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
RsgA_GTPase	PF03193.16	gi|297621354|ref|YP_003709491.1|	-	0.011	15.7	0.0	0.021	14.7	0.0	1.4	1	0	0	1	1	1	0	RsgA	GTPase
ATPase	PF06745.13	gi|297621354|ref|YP_003709491.1|	-	0.029	13.7	0.3	0.056	12.8	0.3	1.4	1	0	0	1	1	1	0	KaiC
AAA_25	PF13481.6	gi|297621354|ref|YP_003709491.1|	-	0.045	13.3	0.0	0.082	12.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|297621354|ref|YP_003709491.1|	-	0.084	13.3	0.1	0.74	10.2	0.0	2.3	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|297621354|ref|YP_003709491.1|	-	0.13	11.5	0.1	0.24	10.6	0.1	1.4	1	0	0	1	1	1	0	NB-ARC	domain
T3SS_ATPase_C	PF18269.1	gi|297621354|ref|YP_003709491.1|	-	0.16	11.9	0.2	0.4	10.6	0.2	1.7	1	1	0	1	1	1	0	T3SS	EscN	ATPase	C-terminal	domain
ABC_tran	PF00005.27	gi|297621354|ref|YP_003709491.1|	-	0.16	12.4	0.1	0.37	11.3	0.1	1.5	1	0	0	1	1	1	0	ABC	transporter
ATP-synt_DE_N	PF02823.16	gi|297621355|ref|YP_003709492.1|	-	2.6e-23	81.7	0.0	4.4e-23	81.0	0.0	1.4	1	0	0	1	1	1	1	ATP	synthase,	Delta/Epsilon	chain,	beta-sandwich	domain
ATP-synt_DE	PF00401.20	gi|297621355|ref|YP_003709492.1|	-	6.4e-09	35.9	3.0	9.9e-09	35.3	3.0	1.2	1	0	0	1	1	1	1	ATP	synthase,	Delta/Epsilon	chain,	long	alpha-helix	domain
RasGEF	PF00617.19	gi|297621357|ref|YP_003709494.1|	-	6.1e-08	33.1	7.9	1.3e-06	28.7	1.5	3.8	1	1	1	2	2	2	1	RasGEF	domain
DUF3993	PF13158.6	gi|297621357|ref|YP_003709494.1|	-	0.0041	17.3	1.0	0.69	10.1	0.1	3.1	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF3993)
DUF2280	PF10045.9	gi|297621357|ref|YP_003709494.1|	-	0.03	14.6	2.8	0.033	14.4	0.7	2.2	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2280)
HEPN_Toprim_N	PF18871.1	gi|297621357|ref|YP_003709494.1|	-	0.1	12.5	3.7	0.1	12.5	0.3	2.6	3	0	0	3	3	3	0	HEPN/Toprim	N-terminal	domain	1
EF-hand_9	PF14658.6	gi|297621357|ref|YP_003709494.1|	-	0.14	12.5	0.0	0.89	9.9	0.0	2.4	2	0	0	2	2	2	0	EF-hand	domain
PA28_beta	PF02252.18	gi|297621357|ref|YP_003709494.1|	-	0.54	9.9	4.7	0.34	10.6	1.0	2.6	3	0	0	3	3	3	0	Proteasome	activator	pa28	beta	subunit
DUF1640	PF07798.11	gi|297621357|ref|YP_003709494.1|	-	1.6	8.7	12.5	0.039	14.0	1.9	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1640)
MSV199	PF10553.9	gi|297621357|ref|YP_003709494.1|	-	2.9	8.1	10.7	0.11	12.7	0.8	3.3	3	1	1	4	4	4	0	MSV199	domain
DUF2935	PF11155.8	gi|297621357|ref|YP_003709494.1|	-	7.3	6.9	8.4	8	6.8	0.9	3.9	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF2935)
G6PD_C	PF02781.16	gi|297621358|ref|YP_003709495.1|	-	2.5e-122	407.7	0.0	3.2e-122	407.3	0.0	1.1	1	0	0	1	1	1	1	Glucose-6-phosphate	dehydrogenase,	C-terminal	domain
G6PD_N	PF00479.22	gi|297621358|ref|YP_003709495.1|	-	8.3e-63	212.2	0.1	1.5e-62	211.4	0.1	1.4	1	0	0	1	1	1	1	Glucose-6-phosphate	dehydrogenase,	NAD	binding	domain
OpcA_G6PD_assem	PF10128.9	gi|297621359|ref|YP_003709496.1|	-	1.5e-31	109.9	0.0	1.9e-31	109.5	0.0	1.1	1	0	0	1	1	1	1	Glucose-6-phosphate	dehydrogenase	subunit
Glucosamine_iso	PF01182.20	gi|297621360|ref|YP_003709497.1|	-	1.1e-64	218.4	0.0	1.3e-64	218.1	0.0	1.0	1	0	0	1	1	1	1	Glucosamine-6-phosphate	isomerases/6-phosphogluconolactonase
PseudoU_synth_2	PF00849.22	gi|297621361|ref|YP_003709498.1|	-	1.1e-15	58.1	0.0	1.1e-14	54.9	0.0	2.0	1	1	0	1	1	1	1	RNA	pseudouridylate	synthase
S4	PF01479.25	gi|297621361|ref|YP_003709498.1|	-	1.3e-09	37.6	1.5	3.9e-09	36.1	0.0	2.6	3	0	0	3	3	3	1	S4	domain
HATPase_c	PF02518.26	gi|297621362|ref|YP_003709499.1|	-	4.3e-31	107.7	0.2	1.1e-30	106.5	0.2	1.7	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_4	PF08448.10	gi|297621362|ref|YP_003709499.1|	-	4e-27	94.6	0.0	1.2e-17	64.1	0.0	2.6	2	0	0	2	2	2	2	PAS	fold
PAS_9	PF13426.7	gi|297621362|ref|YP_003709499.1|	-	2.5e-22	79.1	0.4	1.5e-12	47.7	0.1	2.8	2	0	0	2	2	2	2	PAS	domain
PAS	PF00989.25	gi|297621362|ref|YP_003709499.1|	-	9e-21	74.0	0.0	7.9e-12	45.2	0.0	2.8	2	0	0	2	2	2	2	PAS	fold
HisKA	PF00512.25	gi|297621362|ref|YP_003709499.1|	-	9.9e-19	67.1	0.6	4.8e-18	64.9	0.0	2.4	2	0	0	2	2	2	1	His	Kinase	A	(phospho-acceptor)	domain
CHASE	PF03924.13	gi|297621362|ref|YP_003709499.1|	-	3.3e-11	43.5	0.0	6.6e-11	42.5	0.0	1.4	1	0	0	1	1	1	1	CHASE	domain
PAS_7	PF12860.7	gi|297621362|ref|YP_003709499.1|	-	2.4e-09	37.4	0.3	4.7e-05	23.5	0.0	3.1	3	0	0	3	3	3	2	PAS	fold
PAS_8	PF13188.7	gi|297621362|ref|YP_003709499.1|	-	8.4e-07	28.9	0.0	0.069	13.2	0.0	2.7	2	0	0	2	2	2	2	PAS	domain
HATPase_c_3	PF13589.6	gi|297621362|ref|YP_003709499.1|	-	0.0025	17.6	0.0	0.0053	16.6	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_3	PF08447.12	gi|297621362|ref|YP_003709499.1|	-	0.014	15.7	0.0	0.6	10.4	0.0	2.6	2	0	0	2	2	2	0	PAS	fold
MadM	PF03818.13	gi|297621362|ref|YP_003709499.1|	-	0.49	10.3	4.5	8.5	6.3	0.1	2.8	2	0	0	2	2	2	0	Malonate/sodium	symporter	MadM	subunit
HNOBA	PF07701.14	gi|297621362|ref|YP_003709499.1|	-	1.3	8.5	6.0	2.8	7.3	0.3	3.0	3	0	0	3	3	3	0	Heme	NO	binding	associated
Response_reg	PF00072.24	gi|297621363|ref|YP_003709500.1|	-	1.6e-30	105.6	0.5	1.8e-30	105.4	0.5	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Peptidase_M22	PF00814.25	gi|297621364|ref|YP_003709501.1|	-	1.9e-87	293.4	0.0	2.2e-87	293.2	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
DUF4722	PF15849.5	gi|297621364|ref|YP_003709501.1|	-	0.1	12.3	0.0	0.16	11.6	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4722)
PsbP	PF01789.16	gi|297621364|ref|YP_003709501.1|	-	0.11	12.6	0.0	1.6	8.9	0.0	2.5	3	0	0	3	3	3	0	PsbP
Ribosomal_L33	PF00471.20	gi|297621365|ref|YP_003709502.1|	-	1e-13	51.5	5.1	1.1e-13	51.3	5.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L33
PCuAC	PF04314.13	gi|297621365|ref|YP_003709502.1|	-	0.11	12.3	0.0	0.11	12.3	0.0	1.1	1	0	0	1	1	1	0	Copper	chaperone	PCu(A)C
FtsX	PF02687.21	gi|297621366|ref|YP_003709503.1|	-	9.8e-08	32.4	7.7	9.8e-08	32.4	7.7	3.2	3	0	0	3	3	3	1	FtsX-like	permease	family
MacB_PCD	PF12704.7	gi|297621366|ref|YP_003709503.1|	-	0.0036	17.7	0.0	0.26	11.6	0.0	2.7	2	0	0	2	2	2	1	MacB-like	periplasmic	core	domain
Yip1	PF04893.17	gi|297621366|ref|YP_003709503.1|	-	1.5	8.5	17.9	2.2	8.0	7.5	2.4	2	1	0	2	2	2	0	Yip1	domain
UPF0182	PF03699.13	gi|297621366|ref|YP_003709503.1|	-	9.3	4.2	8.6	0.2	9.8	2.0	1.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0182)
ABC_tran	PF00005.27	gi|297621367|ref|YP_003709504.1|	-	3.6e-28	98.8	0.0	5e-28	98.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|297621367|ref|YP_003709504.1|	-	0.002	17.6	0.2	0.015	14.7	0.2	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|297621367|ref|YP_003709504.1|	-	0.005	16.6	0.1	0.0094	15.7	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|297621367|ref|YP_003709504.1|	-	0.0085	16.0	0.2	0.018	14.9	0.0	1.6	2	0	0	2	2	2	1	RsgA	GTPase
NTPase_1	PF03266.15	gi|297621367|ref|YP_003709504.1|	-	0.05	13.5	0.0	1.2	9.1	0.0	2.1	2	0	0	2	2	2	0	NTPase
IstB_IS21	PF01695.17	gi|297621367|ref|YP_003709504.1|	-	0.062	13.0	0.1	1.2	8.9	0.0	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Methyltransf_28	PF02636.17	gi|297621368|ref|YP_003709505.1|	-	0.0014	18.3	0.0	0.011	15.4	0.0	2.1	1	1	0	1	1	1	1	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
ANAPC8	PF04049.13	gi|297621368|ref|YP_003709505.1|	-	0.0041	17.2	1.4	0.008	16.2	0.3	1.9	2	0	0	2	2	2	1	Anaphase	promoting	complex	subunit	8	/	Cdc23
Thioredoxin_4	PF13462.6	gi|297621369|ref|YP_003709506.1|	-	4.7e-12	46.4	0.1	6.6e-12	45.9	0.1	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|297621369|ref|YP_003709506.1|	-	3.7e-08	33.8	0.4	2.8e-07	30.9	0.3	2.4	1	1	1	2	2	2	1	Thioredoxin-like	domain
VKOR	PF07884.14	gi|297621369|ref|YP_003709506.1|	-	5.7e-07	29.8	10.7	2.3e-06	27.8	10.9	1.8	1	1	0	1	1	1	1	Vitamin	K	epoxide	reductase	family
Thioredoxin	PF00085.20	gi|297621369|ref|YP_003709506.1|	-	7.3e-07	29.1	0.3	0.016	15.2	0.0	2.4	2	0	0	2	2	2	2	Thioredoxin
Thioredoxin_5	PF13743.6	gi|297621369|ref|YP_003709506.1|	-	4.2e-05	23.3	0.2	0.2	11.3	0.0	2.4	1	1	0	2	2	2	2	Thioredoxin
DSBA	PF01323.20	gi|297621369|ref|YP_003709506.1|	-	0.00023	21.0	0.1	0.29	10.9	0.1	2.5	1	1	1	2	2	2	2	DSBA-like	thioredoxin	domain
Thioredoxin_3	PF13192.6	gi|297621369|ref|YP_003709506.1|	-	0.0011	19.0	0.4	0.49	10.5	0.1	2.7	3	0	0	3	3	3	1	Thioredoxin	domain
Thioredoxin_8	PF13905.6	gi|297621369|ref|YP_003709506.1|	-	0.0011	19.3	0.1	0.81	10.1	0.0	2.5	2	0	0	2	2	2	2	Thioredoxin-like
TraF	PF13728.6	gi|297621369|ref|YP_003709506.1|	-	0.0057	16.5	0.0	3.5	7.4	0.0	2.2	2	0	0	2	2	2	2	F	plasmid	transfer	operon	protein
DUF2976	PF11190.8	gi|297621369|ref|YP_003709506.1|	-	0.02	14.7	1.8	0.52	10.1	0.4	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2976)
DUF953	PF06110.11	gi|297621369|ref|YP_003709506.1|	-	0.037	13.7	1.2	12	5.5	0.0	3.0	3	1	0	3	3	3	0	Eukaryotic	protein	of	unknown	function	(DUF953)
Spore_YtrH	PF14034.6	gi|297621369|ref|YP_003709506.1|	-	0.042	14.0	0.5	0.1	12.7	0.5	1.7	1	0	0	1	1	1	0	Sporulation	protein	YtrH
DUF441	PF04284.13	gi|297621369|ref|YP_003709506.1|	-	0.21	11.6	4.0	0.083	12.9	0.8	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF441)
MadM	PF03818.13	gi|297621369|ref|YP_003709506.1|	-	0.41	10.6	4.6	0.34	10.8	0.4	2.5	2	0	0	2	2	2	0	Malonate/sodium	symporter	MadM	subunit
PALP	PF00291.25	gi|297621370|ref|YP_003709507.1|	-	7e-67	225.9	0.0	7.8e-67	225.7	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
DUF2620	PF10941.8	gi|297621370|ref|YP_003709507.1|	-	0.025	14.7	0.4	1.6	8.9	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF2620
Cys_Met_Meta_PP	PF01053.20	gi|297621371|ref|YP_003709508.1|	-	1.5e-136	455.0	0.0	1.7e-136	454.8	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.21	gi|297621371|ref|YP_003709508.1|	-	5.7e-08	32.3	0.0	8.1e-08	31.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Glyco_transf_20	PF00982.21	gi|297621372|ref|YP_003709509.1|	-	5.2e-128	427.7	1.3	7.5e-128	427.2	1.3	1.1	1	0	0	1	1	1	1	Glycosyltransferase	family	20
Nt_Gln_amidase	PF09764.9	gi|297621372|ref|YP_003709509.1|	-	0.014	15.1	0.8	0.024	14.2	0.8	1.4	1	0	0	1	1	1	0	N-terminal	glutamine	amidase
Aminotran_1_2	PF00155.21	gi|297621373|ref|YP_003709510.1|	-	1e-70	238.8	0.0	1.2e-70	238.6	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
SHMT	PF00464.19	gi|297621373|ref|YP_003709510.1|	-	0.00023	19.9	0.0	0.00059	18.5	0.0	1.6	2	0	0	2	2	2	1	Serine	hydroxymethyltransferase
Aminotran_5	PF00266.19	gi|297621373|ref|YP_003709510.1|	-	0.00034	19.7	0.0	0.00053	19.0	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Met_gamma_lyase	PF06838.11	gi|297621373|ref|YP_003709510.1|	-	0.00041	19.0	0.0	0.00063	18.4	0.0	1.3	1	0	0	1	1	1	1	Methionine	gamma-lyase
DegT_DnrJ_EryC1	PF01041.17	gi|297621373|ref|YP_003709510.1|	-	0.094	12.0	0.4	0.25	10.6	0.4	1.6	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.21	gi|297621373|ref|YP_003709510.1|	-	0.11	11.7	0.0	0.21	10.8	0.0	1.4	1	1	0	1	1	1	0	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.20	gi|297621373|ref|YP_003709510.1|	-	0.14	10.6	0.0	0.22	10.0	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
OKR_DC_1	PF01276.20	gi|297621373|ref|YP_003709510.1|	-	0.15	10.7	0.1	0.36	9.5	0.1	1.6	1	1	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	major	domain
ADH_N	PF08240.12	gi|297621374|ref|YP_003709511.1|	-	3.4e-34	117.0	1.3	6e-34	116.2	1.3	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|297621374|ref|YP_003709511.1|	-	2.7e-24	85.6	0.1	4.5e-24	84.9	0.1	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Glu_dehyd_C	PF16912.5	gi|297621374|ref|YP_003709511.1|	-	2.3e-07	30.5	0.4	6.4e-07	29.1	0.4	1.6	1	1	0	1	1	1	1	Glucose	dehydrogenase	C-terminus
AlaDh_PNT_C	PF01262.21	gi|297621374|ref|YP_003709511.1|	-	0.0038	16.5	0.2	0.0053	16.1	0.2	1.2	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
ADH_zinc_N_2	PF13602.6	gi|297621374|ref|YP_003709511.1|	-	0.0043	18.1	0.0	0.014	16.5	0.0	1.8	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
FAD_binding_3	PF01494.19	gi|297621374|ref|YP_003709511.1|	-	0.023	13.9	0.1	0.035	13.3	0.1	1.2	1	0	0	1	1	1	0	FAD	binding	domain
Shikimate_DH	PF01488.20	gi|297621374|ref|YP_003709511.1|	-	0.084	12.9	0.3	0.14	12.2	0.3	1.3	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|297621374|ref|YP_003709511.1|	-	0.11	11.9	0.0	0.17	11.2	0.0	1.2	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Methyltransf_16	PF10294.9	gi|297621374|ref|YP_003709511.1|	-	0.12	12.1	0.0	0.19	11.5	0.0	1.2	1	0	0	1	1	1	0	Lysine	methyltransferase
MTS	PF05175.14	gi|297621374|ref|YP_003709511.1|	-	0.12	11.9	0.1	0.19	11.3	0.1	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
Pyr_redox_3	PF13738.6	gi|297621374|ref|YP_003709511.1|	-	0.24	10.6	1.4	0.37	10.0	1.4	1.2	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
NADH_4Fe-4S	PF10589.9	gi|297621374|ref|YP_003709511.1|	-	0.82	9.8	3.1	1.1	9.4	1.6	2.0	2	0	0	2	2	2	0	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
PRA1	PF03208.19	gi|297621375|ref|YP_003709512.1|	-	1.5	8.5	4.5	1.8	8.2	0.6	1.9	1	1	1	2	2	2	0	PRA1	family	protein
ACT	PF01842.25	gi|297621376|ref|YP_003709513.1|	-	0.00092	18.9	0.0	0.033	14.0	0.0	2.4	2	1	0	2	2	2	1	ACT	domain
ACT_4	PF13291.6	gi|297621376|ref|YP_003709513.1|	-	0.043	14.4	0.0	2.5	8.7	0.0	2.1	2	0	0	2	2	2	0	ACT	domain
E1-E2_ATPase	PF00122.20	gi|297621377|ref|YP_003709514.1|	-	4.5e-43	146.9	0.1	4.5e-43	146.9	0.1	2.1	2	1	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|297621377|ref|YP_003709514.1|	-	8e-23	81.8	0.0	1.7e-22	80.8	0.0	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.26	gi|297621377|ref|YP_003709514.1|	-	5.6e-08	33.1	1.2	8.2e-07	29.4	0.0	3.0	3	0	0	3	3	3	1	Heavy-metal-associated	domain
ATPase-cat_bd	PF12156.8	gi|297621377|ref|YP_003709514.1|	-	0.00012	22.7	3.2	0.00051	20.7	1.3	2.3	1	1	1	2	2	2	1	Putative	metal-binding	domain	of	cation	transport	ATPase
F-box-like	PF12937.7	gi|297621378|ref|YP_003709515.1|	-	2.7e-10	40.0	0.9	8.2e-10	38.4	0.9	1.8	1	0	0	1	1	1	1	F-box-like
WD40	PF00400.32	gi|297621378|ref|YP_003709515.1|	-	2.4e-07	31.3	5.5	0.48	11.4	0.2	5.7	6	0	0	6	6	6	3	WD	domain,	G-beta	repeat
F-box	PF00646.33	gi|297621378|ref|YP_003709515.1|	-	4.1e-06	26.5	0.9	9.9e-06	25.3	0.9	1.6	1	0	0	1	1	1	1	F-box	domain
DUF5561	PF17716.1	gi|297621378|ref|YP_003709515.1|	-	0.055	12.8	0.2	0.088	12.1	0.2	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5561)
Pep_deformylase	PF01327.21	gi|297621379|ref|YP_003709516.1|	-	1.7e-50	170.7	0.0	1.9e-50	170.5	0.0	1.0	1	0	0	1	1	1	1	Polypeptide	deformylase
SecG	PF03840.14	gi|297621380|ref|YP_003709517.1|	-	7.1e-17	61.3	6.3	8.7e-17	61.0	6.3	1.1	1	0	0	1	1	1	1	Preprotein	translocase	SecG	subunit
Cytochrome-c551	PF10643.9	gi|297621380|ref|YP_003709517.1|	-	0.1	12.2	0.2	0.1	12.2	0.2	1.5	2	0	0	2	2	2	0	Photosystem	P840	reaction-centre	cytochrome	c-551
DHHC	PF01529.20	gi|297621380|ref|YP_003709517.1|	-	0.14	12.3	1.4	0.17	12.0	1.4	1.1	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
TIM	PF00121.18	gi|297621381|ref|YP_003709518.1|	-	1.8e-89	299.3	0.0	2e-89	299.1	0.0	1.0	1	0	0	1	1	1	1	Triosephosphate	isomerase
Exonuc_VII_L	PF02601.15	gi|297621382|ref|YP_003709519.1|	-	1.6e-95	320.2	0.3	2e-95	319.9	0.3	1.1	1	0	0	1	1	1	1	Exonuclease	VII,	large	subunit
tRNA_anti_2	PF13742.6	gi|297621382|ref|YP_003709519.1|	-	9.6e-31	105.9	0.0	2.4e-30	104.6	0.0	1.7	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti-codon	PF01336.25	gi|297621382|ref|YP_003709519.1|	-	2.7e-08	33.7	0.0	7.5e-08	32.3	0.0	1.8	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
RMI2	PF16100.5	gi|297621382|ref|YP_003709519.1|	-	0.01	15.6	0.0	0.01	15.6	0.0	2.2	3	0	0	3	3	3	0	RecQ-mediated	genome	instability	protein	2
RecJ_OB	PF17768.1	gi|297621382|ref|YP_003709519.1|	-	0.024	14.8	0.0	0.095	13.0	0.0	2.0	1	0	0	1	1	1	0	RecJ	OB	domain
Exonuc_VII_S	PF02609.16	gi|297621383|ref|YP_003709520.1|	-	1.9e-17	63.1	4.5	2.6e-17	62.6	4.5	1.2	1	0	0	1	1	1	1	Exonuclease	VII	small	subunit
TBCA	PF02970.16	gi|297621383|ref|YP_003709520.1|	-	0.0016	18.7	0.9	0.0019	18.5	0.9	1.2	1	0	0	1	1	1	1	Tubulin	binding	cofactor	A
Sec2p	PF06428.11	gi|297621383|ref|YP_003709520.1|	-	0.0094	15.9	0.5	0.019	14.9	0.5	1.6	1	1	0	1	1	1	1	GDP/GTP	exchange	factor	Sec2p
Phe_tRNA-synt_N	PF02912.18	gi|297621383|ref|YP_003709520.1|	-	0.024	14.5	0.8	0.045	13.7	0.1	1.7	2	0	0	2	2	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
NAD_kinase	PF01513.21	gi|297621384|ref|YP_003709521.1|	-	1.2e-52	179.0	0.1	1.9e-52	178.3	0.1	1.4	1	1	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.24	gi|297621384|ref|YP_003709521.1|	-	0.026	14.2	0.0	0.04	13.5	0.0	1.3	1	0	0	1	1	1	0	Diacylglycerol	kinase	catalytic	domain
DUF11	PF01345.18	gi|297621388|ref|YP_003709525.1|	-	4.3e-37	126.3	1.6	4.3e-12	46.2	0.4	4.2	4	0	0	4	4	4	4	Domain	of	unknown	function	DUF11
NPCBM_assoc	PF10633.9	gi|297621388|ref|YP_003709525.1|	-	1.9e-09	37.6	2.8	0.096	13.0	0.1	4.2	3	1	0	3	3	3	3	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
Chlam_OMP6	PF03504.13	gi|297621388|ref|YP_003709525.1|	-	5.5e-09	36.2	11.2	0.00013	22.1	0.1	4.3	4	0	0	4	4	4	2	Chlamydia	cysteine-rich	outer	membrane	protein	6
CARDB	PF07705.11	gi|297621388|ref|YP_003709525.1|	-	1.1e-08	35.3	0.5	0.0015	18.7	0.2	4.0	3	1	0	3	3	3	2	CARDB
TRAP_beta	PF05753.14	gi|297621388|ref|YP_003709525.1|	-	2.4e-06	27.0	0.0	0.014	14.8	0.0	2.8	3	0	0	3	3	3	2	Translocon-associated	protein	beta	(TRAPB)
ASH	PF15780.5	gi|297621388|ref|YP_003709525.1|	-	3.1e-05	24.1	1.7	0.0034	17.5	0.4	3.1	2	2	0	2	2	2	1	Abnormal	spindle-like	microcephaly-assoc'd,	ASPM-SPD-2-Hydin
bMG10	PF17973.1	gi|297621388|ref|YP_003709525.1|	-	0.00065	19.9	0.2	12	6.2	0.1	4.3	4	1	1	5	5	5	1	Bacterial	Alpha-2-macroglobulin	MG10	domain
Transglut_C	PF00927.22	gi|297621388|ref|YP_003709525.1|	-	0.00077	19.6	0.0	0.0054	16.9	0.0	2.3	2	0	0	2	2	2	1	Transglutaminase	family,	C-terminal	ig	like	domain
Methyltransf_25	PF13649.6	gi|297621389|ref|YP_003709526.1|	-	1.5e-16	60.9	0.0	2.6e-16	60.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|297621389|ref|YP_003709526.1|	-	1.6e-14	54.0	0.0	2.1e-14	53.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297621389|ref|YP_003709526.1|	-	1.2e-10	41.5	0.0	3.6e-10	39.9	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297621389|ref|YP_003709526.1|	-	2e-10	41.2	0.0	3.3e-10	40.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|297621389|ref|YP_003709526.1|	-	6.8e-09	36.4	0.0	1e-08	35.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|297621389|ref|YP_003709526.1|	-	4.4e-08	32.7	0.0	5.1e-07	29.3	0.0	2.3	2	1	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
TehB	PF03848.14	gi|297621389|ref|YP_003709526.1|	-	1.8e-05	24.2	0.0	2.4e-05	23.8	0.0	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_15	PF09445.10	gi|297621389|ref|YP_003709526.1|	-	2.3e-05	24.0	0.0	3e-05	23.7	0.0	1.3	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_32	PF13679.6	gi|297621389|ref|YP_003709526.1|	-	0.00025	21.1	0.0	0.00039	20.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|297621389|ref|YP_003709526.1|	-	0.00086	18.9	0.0	0.0013	18.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
TPMT	PF05724.11	gi|297621389|ref|YP_003709526.1|	-	0.0021	17.8	0.0	0.0048	16.6	0.0	1.7	2	0	0	2	2	2	1	Thiopurine	S-methyltransferase	(TPMT)
NodS	PF05401.11	gi|297621389|ref|YP_003709526.1|	-	0.0028	17.3	0.0	0.0051	16.5	0.0	1.4	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
PrmA	PF06325.13	gi|297621389|ref|YP_003709526.1|	-	0.087	12.2	0.0	0.13	11.6	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
UDPG_MGDP_dh_N	PF03721.14	gi|297621389|ref|YP_003709526.1|	-	0.18	11.4	0.0	0.31	10.6	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
SAM_1	PF00536.30	gi|297621390|ref|YP_003709527.1|	-	0.094	13.2	0.1	0.25	11.8	0.1	1.6	2	0	0	2	2	2	0	SAM	domain	(Sterile	alpha	motif)
Maf	PF02545.14	gi|297621391|ref|YP_003709528.1|	-	1.1e-48	165.2	0.0	1.3e-48	165.0	0.0	1.0	1	0	0	1	1	1	1	Maf-like	protein
HEAT_2	PF13646.6	gi|297621392|ref|YP_003709529.1|	-	7.8e-18	64.7	14.8	0.00033	21.0	0.6	6.4	3	1	4	7	7	7	6	HEAT	repeats
HEAT_PBS	PF03130.16	gi|297621392|ref|YP_003709529.1|	-	0.00012	22.4	14.1	4.5	8.2	0.2	6.0	5	0	0	5	5	5	4	PBS	lyase	HEAT-like	repeat
UDPG_MGDP_dh_N	PF03721.14	gi|297621394|ref|YP_003709531.1|	-	3.7e-64	215.7	0.6	5.6e-64	215.2	0.6	1.3	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|297621394|ref|YP_003709531.1|	-	2.7e-36	123.7	0.0	5.6e-36	122.6	0.0	1.6	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.15	gi|297621394|ref|YP_003709531.1|	-	3.1e-27	95.0	0.0	4.5e-26	91.3	0.0	2.4	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_binding_2	PF03446.15	gi|297621394|ref|YP_003709531.1|	-	6.3e-05	23.2	0.1	0.00046	20.4	0.0	2.4	1	1	1	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ApbA	PF02558.16	gi|297621394|ref|YP_003709531.1|	-	0.00043	20.0	0.0	0.00081	19.1	0.0	1.5	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.18	gi|297621394|ref|YP_003709531.1|	-	0.00058	19.8	0.0	0.0012	18.8	0.0	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|297621394|ref|YP_003709531.1|	-	0.00058	20.4	0.0	0.0065	17.0	0.0	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.18	gi|297621394|ref|YP_003709531.1|	-	0.0018	18.5	0.1	0.0051	17.1	0.1	1.8	1	0	0	1	1	1	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.21	gi|297621394|ref|YP_003709531.1|	-	0.002	17.4	0.0	0.0036	16.6	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox_2	PF07992.14	gi|297621394|ref|YP_003709531.1|	-	0.0036	16.6	0.2	0.013	14.7	0.1	1.8	1	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_Gly3P_dh_N	PF01210.23	gi|297621394|ref|YP_003709531.1|	-	0.0039	17.2	0.0	0.017	15.1	0.0	2.1	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_8	PF13450.6	gi|297621394|ref|YP_003709531.1|	-	0.022	15.0	0.1	0.07	13.4	0.1	1.9	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.19	gi|297621394|ref|YP_003709531.1|	-	0.026	13.8	0.1	0.043	13.1	0.1	1.3	1	0	0	1	1	1	0	FAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|297621394|ref|YP_003709531.1|	-	0.028	13.8	0.1	0.47	9.8	0.0	2.3	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DAO	PF01266.24	gi|297621394|ref|YP_003709531.1|	-	0.062	12.9	0.2	0.11	12.0	0.2	1.4	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.6	gi|297621394|ref|YP_003709531.1|	-	0.084	13.3	0.0	0.24	11.8	0.0	1.9	1	1	0	1	1	1	0	Putative	NAD(P)-binding
potato_inhibit	PF00280.18	gi|297621394|ref|YP_003709531.1|	-	0.15	12.7	0.0	0.56	10.9	0.0	2.0	1	0	0	1	1	1	0	Potato	inhibitor	I	family
polyprenyl_synt	PF00348.17	gi|297621395|ref|YP_003709532.1|	-	4.7e-54	183.1	0.4	5.7e-54	182.9	0.4	1.0	1	0	0	1	1	1	1	Polyprenyl	synthetase
Bac_transf	PF02397.16	gi|297621396|ref|YP_003709533.1|	-	3.4e-67	225.6	0.0	4e-67	225.4	0.0	1.0	1	0	0	1	1	1	1	Bacterial	sugar	transferase
DUF1179	PF06678.11	gi|297621396|ref|YP_003709533.1|	-	0.19	11.7	0.2	0.34	10.9	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1179)
PNPase	PF03726.14	gi|297621398|ref|YP_003709535.1|	-	0.0062	17.0	0.7	0.012	16.1	0.7	1.5	1	0	0	1	1	1	1	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
IDH	PF03971.14	gi|297621398|ref|YP_003709535.1|	-	0.011	14.2	0.1	0.012	14.1	0.1	1.1	1	0	0	1	1	1	0	Monomeric	isocitrate	dehydrogenase
DUF4533	PF15047.6	gi|297621398|ref|YP_003709535.1|	-	0.026	14.1	0.1	0.042	13.4	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4533)
THF_DHG_CYH_C	PF02882.19	gi|297621399|ref|YP_003709536.1|	-	6.7e-68	227.0	0.2	8.8e-68	226.6	0.2	1.2	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
THF_DHG_CYH	PF00763.23	gi|297621399|ref|YP_003709536.1|	-	4.4e-39	133.3	1.0	6.9e-39	132.7	1.0	1.3	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	catalytic	domain
AlaDh_PNT_C	PF01262.21	gi|297621399|ref|YP_003709536.1|	-	0.0056	16.0	0.2	0.012	14.9	0.1	1.6	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
CTX_RstB	PF07459.11	gi|297621399|ref|YP_003709536.1|	-	0.046	14.0	0.1	0.09	13.0	0.1	1.4	1	0	0	1	1	1	0	CTX	phage	RstB	protein
DUF3343	PF11823.8	gi|297621399|ref|YP_003709536.1|	-	0.16	11.4	0.8	0.29	10.6	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3343)
ApbE	PF02424.15	gi|297621400|ref|YP_003709537.1|	-	1.7e-70	237.5	0.0	2.1e-70	237.2	0.0	1.0	1	0	0	1	1	1	1	ApbE	family
Peripla_BP_2	PF01497.18	gi|297621400|ref|YP_003709537.1|	-	0.003	17.1	0.0	0.0068	16.0	0.0	1.5	1	0	0	1	1	1	1	Periplasmic	binding	protein
TPR_16	PF13432.6	gi|297621401|ref|YP_003709538.1|	-	1.1e-05	25.9	0.4	0.0049	17.5	0.4	2.3	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297621401|ref|YP_003709538.1|	-	0.00026	21.4	3.3	0.22	12.2	0.1	3.9	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|297621401|ref|YP_003709538.1|	-	0.0023	18.0	0.1	0.0049	17.0	0.1	1.5	1	1	0	1	1	1	1	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297621401|ref|YP_003709538.1|	-	0.0082	15.9	10.3	0.11	12.3	0.1	3.7	5	0	0	5	5	5	2	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297621401|ref|YP_003709538.1|	-	0.014	15.9	2.1	0.022	15.3	0.2	2.2	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297621401|ref|YP_003709538.1|	-	0.019	15.0	8.7	5.4	7.4	0.2	3.9	5	0	0	5	5	4	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621401|ref|YP_003709538.1|	-	0.024	14.8	0.0	0.024	14.8	0.0	3.6	5	0	0	5	5	5	0	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|297621401|ref|YP_003709538.1|	-	0.025	14.9	3.3	0.074	13.5	0.6	2.5	2	0	0	2	2	2	0	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297621401|ref|YP_003709538.1|	-	0.04	14.1	1.0	0.56	10.5	0.4	2.6	3	0	0	3	3	3	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.6	gi|297621401|ref|YP_003709538.1|	-	0.19	12.7	0.6	3.9	8.6	0.1	2.9	2	1	2	4	4	3	0	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|297621401|ref|YP_003709538.1|	-	0.19	11.4	8.8	0.15	11.8	0.5	4.1	4	1	2	6	6	6	0	TPR	repeat
TPR_12	PF13424.6	gi|297621401|ref|YP_003709538.1|	-	1.2	9.4	4.6	6.2	7.2	0.1	2.7	2	1	0	3	3	3	0	Tetratricopeptide	repeat
DUF883	PF05957.13	gi|297621402|ref|YP_003709539.1|	-	0.0013	19.3	0.1	0.0015	19.1	0.1	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF883)
Apolipoprotein	PF01442.18	gi|297621402|ref|YP_003709539.1|	-	0.052	13.4	0.1	0.059	13.2	0.1	1.1	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
AAA_assoc_C	PF09821.9	gi|297621404|ref|YP_003709541.1|	-	0.0034	17.9	0.1	0.17	12.4	0.0	2.9	2	1	1	3	3	3	1	C-terminal	AAA-associated	domain
Phage_rep_org_N	PF09681.10	gi|297621404|ref|YP_003709541.1|	-	0.019	14.9	0.4	18	5.3	0.1	3.2	3	0	0	3	3	3	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF4423	PF14394.6	gi|297621404|ref|YP_003709541.1|	-	0.12	12.1	0.3	0.78	9.4	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
SMC_N	PF02463.19	gi|297621405|ref|YP_003709542.1|	-	1.2e-19	70.6	0.0	1.6e-19	70.2	0.0	1.1	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|297621405|ref|YP_003709542.1|	-	9.2e-15	55.7	0.2	1.3e-14	55.2	0.2	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|297621405|ref|YP_003709542.1|	-	1.8e-12	47.7	0.0	4.2e-12	46.5	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_21	PF13304.6	gi|297621405|ref|YP_003709542.1|	-	6.4e-08	32.8	0.3	8.7e-06	25.8	0.0	2.2	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|297621405|ref|YP_003709542.1|	-	2e-06	27.5	0.0	6.9e-06	25.7	0.0	1.9	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_27	PF13514.6	gi|297621405|ref|YP_003709542.1|	-	0.00011	21.9	0.5	0.0003	20.4	0.0	2.1	3	0	0	3	3	3	1	AAA	domain
ABC_tran	PF00005.27	gi|297621405|ref|YP_003709542.1|	-	0.045	14.3	0.2	0.12	12.9	0.2	2.0	1	1	0	1	1	1	0	ABC	transporter
DNA_pol3_beta	PF00712.19	gi|297621406|ref|YP_003709543.1|	-	7.2e-32	110.1	0.2	6.1e-24	84.5	0.1	3.2	3	1	0	3	3	3	2	DNA	polymerase	III	beta	subunit,	N-terminal	domain
DNA_pol3_beta_2	PF02767.16	gi|297621406|ref|YP_003709543.1|	-	1.2e-28	99.6	0.1	2.1e-21	76.3	0.0	2.8	3	0	0	3	3	3	2	DNA	polymerase	III	beta	subunit,	central	domain
DNA_pol3_beta_3	PF02768.15	gi|297621406|ref|YP_003709543.1|	-	1e-18	67.3	0.0	3.2e-18	65.7	0.0	1.9	2	0	0	2	2	2	1	DNA	polymerase	III	beta	subunit,	C-terminal	domain
Propeptide_C25	PF08126.11	gi|297621406|ref|YP_003709543.1|	-	0.12	11.4	0.1	1.7	7.7	0.1	2.2	2	0	0	2	2	2	0	Propeptide_C25
SmpB	PF01668.18	gi|297621407|ref|YP_003709544.1|	-	2.8e-57	192.6	4.6	3.2e-57	192.4	4.6	1.0	1	0	0	1	1	1	1	SmpB	protein
CTV_P23	PF04808.12	gi|297621407|ref|YP_003709544.1|	-	0.054	13.0	0.3	0.075	12.6	0.3	1.2	1	0	0	1	1	1	0	Citrus	tristeza	virus	(CTV)	P23	protein
SPOUT_MTase	PF02590.17	gi|297621408|ref|YP_003709545.1|	-	1.1e-38	132.6	0.1	2.9e-38	131.3	0.1	1.5	1	1	0	1	1	1	1	Predicted	SPOUT	methyltransferase
SPOUT_MTase_2	PF14419.6	gi|297621408|ref|YP_003709545.1|	-	0.19	11.1	0.0	0.27	10.6	0.0	1.2	1	0	0	1	1	1	0	AF2226-like	SPOUT	RNA	Methylase	fused	to	THUMP
TRAM	PF01938.20	gi|297621410|ref|YP_003709547.1|	-	3.2e-05	23.8	0.2	5.5e-05	23.1	0.2	1.3	1	0	0	1	1	1	1	TRAM	domain
MFS_1	PF07690.16	gi|297621410|ref|YP_003709547.1|	-	0.79	8.6	17.7	1.1	8.1	17.7	1.1	1	0	0	1	1	1	0	Major	Facilitator	Superfamily
ACPS	PF01648.20	gi|297621411|ref|YP_003709548.1|	-	3.5e-24	85.1	0.0	4e-24	84.9	0.0	1.0	1	0	0	1	1	1	1	4'-phosphopantetheinyl	transferase	superfamily
4PPT_N	PF17837.1	gi|297621411|ref|YP_003709548.1|	-	0.0035	17.4	1.4	0.055	13.6	1.4	2.2	1	1	0	1	1	1	1	4'-phosphopantetheinyl	transferase	N-terminal	domain
PP-binding	PF00550.25	gi|297621412|ref|YP_003709549.1|	-	6e-15	55.4	0.8	6.6e-15	55.2	0.8	1.0	1	0	0	1	1	1	1	Phosphopantetheine	attachment	site
DUF1493	PF07377.12	gi|297621412|ref|YP_003709549.1|	-	0.00038	20.9	0.6	0.00039	20.8	0.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1493)
PP-binding_2	PF14573.6	gi|297621412|ref|YP_003709549.1|	-	0.025	14.8	2.0	0.071	13.4	0.3	1.9	1	1	0	2	2	2	0	Acyl-carrier
Ribosomal_L50	PF10501.9	gi|297621412|ref|YP_003709549.1|	-	0.033	14.3	0.0	0.034	14.3	0.0	1.4	1	1	0	1	1	1	0	Ribosomal	subunit	39S
Ribosomal_L12_N	PF16320.5	gi|297621412|ref|YP_003709549.1|	-	0.054	13.2	0.1	0.12	12.1	0.1	1.7	1	0	0	1	1	1	0	Ribosomal	protein	L7/L12	dimerisation	domain
adh_short_C2	PF13561.6	gi|297621413|ref|YP_003709550.1|	-	5.8e-68	228.9	5.2	7.2e-68	228.6	5.2	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|297621413|ref|YP_003709550.1|	-	2.3e-63	213.2	5.3	2.8e-63	212.9	5.3	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|297621413|ref|YP_003709550.1|	-	4.5e-26	91.8	1.5	5.9e-26	91.5	1.5	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|297621413|ref|YP_003709550.1|	-	6.3e-05	22.6	1.6	0.00016	21.2	0.7	2.0	2	1	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|297621413|ref|YP_003709550.1|	-	0.00028	20.0	1.1	0.00041	19.4	1.1	1.3	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|297621413|ref|YP_003709550.1|	-	0.00046	19.4	1.2	0.00062	19.0	1.2	1.2	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
Sacchrp_dh_NADP	PF03435.18	gi|297621413|ref|YP_003709550.1|	-	0.00099	19.4	0.2	0.0042	17.3	0.2	2.0	2	0	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
DNA_processg_A	PF02481.15	gi|297621413|ref|YP_003709550.1|	-	0.029	13.6	0.8	0.061	12.6	0.8	1.5	1	0	0	1	1	1	0	DNA	recombination-mediator	protein	A
DUF1776	PF08643.10	gi|297621413|ref|YP_003709550.1|	-	0.095	12.0	0.0	0.14	11.5	0.0	1.1	1	0	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
Acyl_transf_1	PF00698.21	gi|297621414|ref|YP_003709551.1|	-	7.4e-30	104.5	0.0	8.6e-30	104.3	0.0	1.0	1	0	0	1	1	1	1	Acyl	transferase	domain
ACP_syn_III_C	PF08541.10	gi|297621415|ref|YP_003709552.1|	-	6.7e-32	109.5	0.0	1.6e-31	108.3	0.0	1.7	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
ACP_syn_III	PF08545.10	gi|297621415|ref|YP_003709552.1|	-	2.5e-27	94.5	0.9	5e-27	93.6	0.9	1.5	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Chal_sti_synt_C	PF02797.15	gi|297621415|ref|YP_003709552.1|	-	7.2e-05	22.8	0.0	0.00016	21.7	0.0	1.5	1	0	0	1	1	1	1	Chalcone	and	stilbene	synthases,	C-terminal	domain
SpoVAD	PF07451.11	gi|297621415|ref|YP_003709552.1|	-	0.00033	19.5	4.8	0.17	10.5	2.4	2.4	2	1	0	2	2	2	2	Stage	V	sporulation	protein	AD	(SpoVAD)
Chal_sti_synt_N	PF00195.19	gi|297621415|ref|YP_003709552.1|	-	0.0013	18.2	0.9	0.0023	17.4	0.3	1.7	2	0	0	2	2	2	1	Chalcone	and	stilbene	synthases,	N-terminal	domain
Thiolase_N	PF00108.23	gi|297621415|ref|YP_003709552.1|	-	0.011	15.1	1.6	0.025	13.9	0.5	1.9	2	0	0	2	2	2	0	Thiolase,	N-terminal	domain
Toprim_4	PF13662.6	gi|297621416|ref|YP_003709553.1|	-	5.3e-21	74.9	0.0	7.8e-21	74.4	0.0	1.3	1	0	0	1	1	1	1	Toprim	domain
RecR	PF02132.15	gi|297621416|ref|YP_003709553.1|	-	0.00019	21.0	2.8	0.00019	21.0	2.8	1.7	2	0	0	2	2	2	1	RecR	protein
Toprim	PF01751.22	gi|297621416|ref|YP_003709553.1|	-	0.00019	21.6	0.0	0.00032	20.9	0.0	1.3	1	0	0	1	1	1	1	Toprim	domain
DUF5543	PF17697.1	gi|297621416|ref|YP_003709553.1|	-	0.043	14.1	0.0	0.068	13.5	0.0	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5543)
HHH	PF00633.23	gi|297621416|ref|YP_003709553.1|	-	0.17	11.8	0.0	0.35	10.8	0.0	1.5	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
POTRA	PF07244.15	gi|297621417|ref|YP_003709554.1|	-	1.1e-53	179.8	5.5	1.8e-14	54.1	0.0	5.3	5	0	0	5	5	5	5	Surface	antigen	variable	number	repeat
Bac_surface_Ag	PF01103.23	gi|297621417|ref|YP_003709554.1|	-	2.3e-42	145.6	0.9	3.6e-42	145.0	0.9	1.2	1	0	0	1	1	1	1	Surface	antigen
POTRA_2	PF08479.11	gi|297621417|ref|YP_003709554.1|	-	8e-07	28.8	0.0	0.044	13.6	0.0	2.9	3	0	0	3	3	3	2	POTRA	domain,	ShlB-type
OmpH	PF03938.14	gi|297621418|ref|YP_003709555.1|	-	9.6e-22	77.8	8.7	1.2e-21	77.5	8.7	1.1	1	0	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
Herpes_BLRF2	PF05812.12	gi|297621418|ref|YP_003709555.1|	-	0.015	15.4	1.1	0.025	14.7	1.0	1.5	1	1	0	1	1	1	0	Herpesvirus	BLRF2	protein
DUF2408	PF10303.9	gi|297621418|ref|YP_003709555.1|	-	0.015	15.9	2.1	0.022	15.3	2.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
DUF4034	PF13226.6	gi|297621418|ref|YP_003709555.1|	-	0.015	14.6	0.3	0.027	13.8	0.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4034)
SAT	PF16073.5	gi|297621418|ref|YP_003709555.1|	-	0.018	14.8	0.1	0.046	13.4	0.0	1.6	1	1	1	2	2	2	0	Starter	unit:ACP	transacylase	in	aflatoxin	biosynthesis
Fzo_mitofusin	PF04799.13	gi|297621418|ref|YP_003709555.1|	-	0.024	14.2	2.6	0.1	12.1	1.8	2.0	2	0	0	2	2	2	0	fzo-like	conserved	region
Syntaxin-18_N	PF10496.9	gi|297621418|ref|YP_003709555.1|	-	0.029	14.6	1.6	0.065	13.5	1.6	1.6	1	0	0	1	1	1	0	SNARE-complex	protein	Syntaxin-18	N-terminus
Exonuc_VII_L	PF02601.15	gi|297621418|ref|YP_003709555.1|	-	0.043	13.4	2.7	0.046	13.3	2.7	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
Syntaxin_2	PF14523.6	gi|297621418|ref|YP_003709555.1|	-	0.076	13.4	8.4	0.041	14.2	6.4	1.6	2	0	0	2	2	1	0	Syntaxin-like	protein
Cyclin_C	PF02984.19	gi|297621418|ref|YP_003709555.1|	-	0.082	13.0	0.5	0.21	11.7	0.1	1.9	1	1	1	2	2	2	0	Cyclin,	C-terminal	domain
TetR	PF13972.6	gi|297621418|ref|YP_003709555.1|	-	0.097	12.4	3.1	1.4	8.7	0.0	2.3	1	1	1	2	2	2	0	Bacterial	transcriptional	repressor
ABC_tran_CTD	PF16326.5	gi|297621418|ref|YP_003709555.1|	-	0.22	11.8	7.5	0.68	10.2	7.5	1.9	1	1	0	1	1	1	0	ABC	transporter	C-terminal	domain
LAMTOR	PF15454.6	gi|297621418|ref|YP_003709555.1|	-	0.24	12.0	4.5	3	8.5	0.7	2.3	1	1	1	2	2	2	0	Late	endosomal/lysosomal	adaptor	and	MAPK	and	MTOR	activator
DUF349	PF03993.12	gi|297621418|ref|YP_003709555.1|	-	5.2	7.4	12.0	2.5	8.5	7.2	2.5	2	1	1	3	3	3	0	Domain	of	Unknown	Function	(DUF349)
Hexapep	PF00132.24	gi|297621419|ref|YP_003709556.1|	-	6.5e-34	114.4	40.3	5.1e-10	38.7	3.3	5.9	5	1	1	6	6	6	6	Bacterial	transferase	hexapeptide	(six	repeats)
LpxD	PF04613.14	gi|297621419|ref|YP_003709556.1|	-	1.4e-18	66.4	0.1	6.1e-18	64.4	0.1	2.0	1	1	0	1	1	1	1	UDP-3-O-[3-hydroxymyristoyl]	glucosamine	N-acyltransferase,	LpxD
Hexapep_2	PF14602.6	gi|297621419|ref|YP_003709556.1|	-	1.2e-16	60.2	22.7	6.1e-09	35.5	1.6	5.9	4	1	2	6	6	6	5	Hexapeptide	repeat	of	succinyl-transferase
Fucokinase	PF07959.12	gi|297621419|ref|YP_003709556.1|	-	0.14	11.1	2.3	1.5	7.6	2.3	2.3	1	1	0	1	1	1	0	L-fucokinase
ParD	PF09386.10	gi|297621421|ref|YP_003709558.1|	-	0.0026	18.1	0.1	0.0059	17.0	0.0	1.6	1	1	0	1	1	1	1	Antitoxin	ParD
Tn7_Tnp_TnsA_C	PF08721.11	gi|297621421|ref|YP_003709558.1|	-	0.038	14.6	0.1	8.5	7.1	0.0	2.0	1	1	1	2	2	2	0	TnsA	endonuclease	C	terminal
YafQ_toxin	PF15738.5	gi|297621422|ref|YP_003709559.1|	-	2.3e-32	111.1	3.3	2.6e-32	111.0	3.3	1.0	1	0	0	1	1	1	1	Bacterial	toxin	of	type	II	toxin-antitoxin	system,	YafQ
ParE_toxin	PF05016.15	gi|297621422|ref|YP_003709559.1|	-	2.1e-07	31.5	0.1	2.3e-07	31.3	0.1	1.0	1	0	0	1	1	1	1	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
DDE_3	PF13358.6	gi|297621424|ref|YP_003709561.1|	-	1.6e-30	105.8	0.0	2.6e-30	105.1	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.6	gi|297621424|ref|YP_003709561.1|	-	3.4e-17	61.8	0.1	1e-16	60.3	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|297621424|ref|YP_003709561.1|	-	1.8e-06	27.9	0.0	6.4e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|297621424|ref|YP_003709561.1|	-	9e-06	25.3	0.0	2.2e-05	24.1	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297621424|ref|YP_003709561.1|	-	1.3e-05	25.2	0.0	4.8e-05	23.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.26	gi|297621424|ref|YP_003709561.1|	-	3.5e-05	24.0	0.0	0.00038	20.6	0.0	2.2	2	0	0	2	2	2	1	Integrase	core	domain
DDE_Tnp_ISAZ013	PF07592.11	gi|297621424|ref|YP_003709561.1|	-	0.00011	21.4	0.3	0.21	10.5	0.1	2.2	2	0	0	2	2	2	2	Rhodopirellula	transposase	DDE	domain
Sigma70_r4_2	PF08281.12	gi|297621424|ref|YP_003709561.1|	-	0.00037	20.1	0.0	0.00077	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Terminase_5	PF06056.12	gi|297621424|ref|YP_003709561.1|	-	0.00062	19.6	0.0	0.0013	18.5	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_40	PF14493.6	gi|297621424|ref|YP_003709561.1|	-	0.0036	17.7	0.1	0.016	15.7	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|297621424|ref|YP_003709561.1|	-	0.0063	16.0	0.0	0.017	14.6	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
rve_3	PF13683.6	gi|297621424|ref|YP_003709561.1|	-	0.031	14.1	0.0	0.095	12.5	0.0	1.9	1	0	0	1	1	1	0	Integrase	core	domain
HTH_38	PF13936.6	gi|297621424|ref|YP_003709561.1|	-	0.038	13.8	1.6	0.43	10.4	0.0	2.7	3	0	0	3	3	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|297621424|ref|YP_003709561.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.7	gi|297621424|ref|YP_003709561.1|	-	0.13	12.3	0.0	0.28	11.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.19	gi|297621424|ref|YP_003709561.1|	-	0.16	11.5	0.0	0.65	9.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.6	gi|297621424|ref|YP_003709561.1|	-	0.86	9.9	3.6	5.9	7.2	0.1	3.1	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
Hydrolase_4	PF12146.8	gi|297621425|ref|YP_003709562.1|	-	2.7e-05	23.6	0.0	3.6e-05	23.2	0.0	1.2	1	0	0	1	1	1	1	Serine	aminopeptidase,	S33
Abhydrolase_1	PF00561.20	gi|297621425|ref|YP_003709562.1|	-	6.1e-05	22.8	1.6	0.00017	21.3	0.0	2.3	2	1	0	2	2	2	1	alpha/beta	hydrolase	fold
Abhydrolase_6	PF12697.7	gi|297621425|ref|YP_003709562.1|	-	0.00011	22.9	0.0	0.00012	22.8	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Esterase	PF00756.20	gi|297621425|ref|YP_003709562.1|	-	0.023	14.4	0.1	0.043	13.5	0.0	1.5	2	0	0	2	2	2	0	Putative	esterase
2-oxoacid_dh	PF00198.23	gi|297621427|ref|YP_003709564.1|	-	5.1e-78	261.7	0.0	7.5e-78	261.2	0.0	1.3	1	0	0	1	1	1	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
Biotin_lipoyl	PF00364.22	gi|297621427|ref|YP_003709564.1|	-	1.9e-15	56.4	0.0	4.5e-15	55.2	0.0	1.7	1	0	0	1	1	1	1	Biotin-requiring	enzyme
E3_binding	PF02817.17	gi|297621427|ref|YP_003709564.1|	-	1.5e-14	54.0	3.0	2.1e-14	53.6	0.6	2.3	2	1	0	2	2	2	1	e3	binding	domain
Biotin_lipoyl_2	PF13533.6	gi|297621427|ref|YP_003709564.1|	-	0.02	14.7	0.1	0.081	12.8	0.0	2.0	2	0	0	2	2	2	0	Biotin-lipoyl	like
HlyD_3	PF13437.6	gi|297621427|ref|YP_003709564.1|	-	0.031	15.0	0.1	0.12	13.0	0.0	2.0	2	0	0	2	2	2	0	HlyD	family	secretion	protein
Transket_pyr	PF02779.24	gi|297621428|ref|YP_003709565.1|	-	6.2e-43	146.5	0.0	1e-42	145.8	0.0	1.4	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.20	gi|297621428|ref|YP_003709565.1|	-	1.7e-41	141.0	0.1	2.8e-41	140.3	0.1	1.4	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
PFOR_II	PF17147.4	gi|297621428|ref|YP_003709565.1|	-	0.012	15.9	0.0	0.026	14.8	0.0	1.6	1	0	0	1	1	1	0	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Peptidase_M20	PF01546.28	gi|297621428|ref|YP_003709565.1|	-	0.013	15.2	0.0	0.015	15.0	0.0	1.2	1	0	0	1	1	1	0	Peptidase	family	M20/M25/M40
FMN_red	PF03358.15	gi|297621428|ref|YP_003709565.1|	-	0.03	14.1	0.0	0.11	12.3	0.0	1.9	2	0	0	2	2	2	0	NADPH-dependent	FMN	reductase
E1_dh	PF00676.20	gi|297621429|ref|YP_003709566.1|	-	4.6e-72	242.5	0.0	5.2e-72	242.3	0.0	1.0	1	0	0	1	1	1	1	Dehydrogenase	E1	component
TPP_enzyme_C	PF02775.21	gi|297621429|ref|YP_003709566.1|	-	1.3e-06	28.3	0.1	3e-06	27.1	0.1	1.7	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.6	gi|297621429|ref|YP_003709566.1|	-	9.3e-05	21.8	0.1	0.00026	20.3	0.0	1.8	2	0	0	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
Transketolase_N	PF00456.21	gi|297621429|ref|YP_003709566.1|	-	0.00056	19.0	0.0	0.00071	18.6	0.0	1.1	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
Luciferase_N	PF05295.11	gi|297621429|ref|YP_003709566.1|	-	0.091	12.8	0.0	1.9	8.6	0.0	2.3	1	1	1	2	2	2	0	Luciferase/LBP	N-terminal	domain
PG_binding_2	PF08823.11	gi|297621429|ref|YP_003709566.1|	-	0.097	13.0	0.2	2.2	8.7	0.0	2.4	2	0	0	2	2	2	0	Putative	peptidoglycan	binding	domain
DUF2847	PF11009.8	gi|297621430|ref|YP_003709567.1|	-	3e-23	81.7	0.0	4.4e-23	81.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2847)
Colicin_immun	PF09204.10	gi|297621430|ref|YP_003709567.1|	-	4.4e-06	27.1	0.1	6.3e-06	26.6	0.1	1.3	1	0	0	1	1	1	1	Bacterial	self-protective	colicin-like	immunity
Disulph_isomer	PF06491.11	gi|297621430|ref|YP_003709567.1|	-	0.16	12.0	0.0	0.4	10.8	0.0	1.6	1	1	0	1	1	1	0	Disulphide	isomerase
SDF	PF00375.18	gi|297621431|ref|YP_003709568.1|	-	4.5e-93	312.4	38.3	5.2e-93	312.1	38.3	1.0	1	0	0	1	1	1	1	Sodium:dicarboxylate	symporter	family
Ank_4	PF13637.6	gi|297621432|ref|YP_003709569.1|	-	4.3e-12	46.3	0.1	2.2e-06	28.1	0.0	4.6	2	1	2	4	4	4	3	Ankyrin	repeats	(many	copies)
Ank_2	PF12796.7	gi|297621432|ref|YP_003709569.1|	-	8.1e-10	39.2	0.3	1.9e-06	28.3	0.0	3.9	2	1	1	3	3	3	2	Ankyrin	repeats	(3	copies)
Ank	PF00023.30	gi|297621432|ref|YP_003709569.1|	-	4.5e-09	36.4	0.1	8.2e-05	22.9	0.0	3.9	3	0	0	3	3	3	2	Ankyrin	repeat
Ank_5	PF13857.6	gi|297621432|ref|YP_003709569.1|	-	1.2e-06	28.6	0.2	0.00014	22.0	0.0	3.0	2	1	1	3	3	3	1	Ankyrin	repeats	(many	copies)
Ank_3	PF13606.6	gi|297621432|ref|YP_003709569.1|	-	8.1e-05	22.7	0.1	0.021	15.3	0.0	4.5	4	0	0	4	4	4	1	Ankyrin	repeat
DUF4125	PF13526.6	gi|297621432|ref|YP_003709569.1|	-	0.0072	16.0	0.3	0.0072	16.0	0.3	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF4125)
UPF0231	PF06062.11	gi|297621432|ref|YP_003709569.1|	-	0.023	15.0	3.2	0.23	11.7	0.1	3.5	5	0	0	5	5	5	0	Uncharacterised	protein	family	(UPF0231)
DUF4020	PF13212.6	gi|297621432|ref|YP_003709569.1|	-	0.24	11.2	1.9	11	5.8	0.5	3.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4020)
PemK_toxin	PF02452.17	gi|297621433|ref|YP_003709570.1|	-	8.1e-25	87.4	0.1	8.8e-25	87.3	0.1	1.0	1	0	0	1	1	1	1	PemK-like,	MazF-like	toxin	of	type	II	toxin-antitoxin	system
PSK_trans_fac	PF07704.11	gi|297621434|ref|YP_003709571.1|	-	0.00062	20.5	0.1	0.00075	20.2	0.1	1.1	1	0	0	1	1	1	1	Rv0623-like	transcription	factor
CBP4	PF07960.11	gi|297621434|ref|YP_003709571.1|	-	0.023	14.5	0.2	0.028	14.3	0.2	1.2	1	0	0	1	1	1	0	CBP4
ACP_PD	PF04336.12	gi|297621434|ref|YP_003709571.1|	-	0.046	14.1	0.3	0.059	13.8	0.3	1.2	1	0	0	1	1	1	0	Acyl	carrier	protein	phosphodiesterase
Paz_1	PF18349.1	gi|297621434|ref|YP_003709571.1|	-	0.097	12.6	0.1	0.11	12.5	0.1	1.2	1	0	0	1	1	1	0	PAZ	domain
Glyco_hydro_38	PF18438.1	gi|297621434|ref|YP_003709571.1|	-	0.12	12.4	0.1	0.15	12.1	0.1	1.1	1	0	0	1	1	1	0	Glycosyl	hydrolases	family	38	C-terminal	domain	1
Ala_racemase_N	PF01168.20	gi|297621435|ref|YP_003709572.1|	-	5.4e-25	88.3	0.0	6.2e-25	88.1	0.0	1.0	1	0	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
Orn_Arg_deC_N	PF02784.16	gi|297621435|ref|YP_003709572.1|	-	0.089	12.2	0.0	0.11	11.8	0.0	1.2	1	0	0	1	1	1	0	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
Ribul_P_3_epim	PF00834.19	gi|297621435|ref|YP_003709572.1|	-	0.14	11.6	0.0	0.22	10.9	0.0	1.4	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
DUF5385	PF17359.2	gi|297621436|ref|YP_003709573.1|	-	0.028	14.0	0.6	0.073	12.6	0.0	1.8	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5385)
MscL	PF01741.18	gi|297621436|ref|YP_003709573.1|	-	0.11	12.8	0.1	0.18	12.1	0.1	1.3	1	0	0	1	1	1	0	Large-conductance	mechanosensitive	channel,	MscL
YdfA_immunity	PF12127.8	gi|297621437|ref|YP_003709574.1|	-	1.1e-148	494.4	8.4	1.4e-148	494.1	8.4	1.0	1	0	0	1	1	1	1	SigmaW	regulon	antibacterial
Flot	PF15975.5	gi|297621437|ref|YP_003709574.1|	-	0.019	15.2	6.3	0.037	14.2	6.3	1.4	1	0	0	1	1	1	0	Flotillin
DUF1673	PF07895.11	gi|297621437|ref|YP_003709574.1|	-	0.026	14.2	2.7	0.043	13.5	2.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
NfeD	PF01957.18	gi|297621438|ref|YP_003709575.1|	-	1.9e-12	47.4	0.0	1.9e-12	47.4	0.0	2.0	3	0	0	3	3	3	1	NfeD-like	C-terminal,	partner-binding
DUF3487	PF11990.8	gi|297621438|ref|YP_003709575.1|	-	0.052	13.4	1.6	0.056	13.3	0.6	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3487)
DUF3165	PF11364.8	gi|297621438|ref|YP_003709575.1|	-	2.4	8.6	7.9	6.4	7.2	7.9	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3165)
NfeD	PF01957.18	gi|297621439|ref|YP_003709576.1|	-	1.4e-06	28.6	3.2	3.8e-06	27.2	0.2	3.3	3	1	0	3	3	3	1	NfeD-like	C-terminal,	partner-binding
CLP_protease	PF00574.23	gi|297621439|ref|YP_003709576.1|	-	1.2e-05	25.3	0.3	0.011	15.6	0.0	2.9	3	0	0	3	3	3	2	Clp	protease
SDH_sah	PF01972.16	gi|297621439|ref|YP_003709576.1|	-	8.3e-05	21.7	0.0	0.00017	20.7	0.0	1.4	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
ECH_1	PF00378.20	gi|297621439|ref|YP_003709576.1|	-	0.023	14.0	0.9	0.099	11.9	0.1	2.0	2	0	0	2	2	2	0	Enoyl-CoA	hydratase/isomerase
NusG_II	PF07009.11	gi|297621439|ref|YP_003709576.1|	-	0.03	14.5	0.1	0.088	13.0	0.1	1.7	1	0	0	1	1	1	0	NusG	domain	II
Peptidase_S49	PF01343.18	gi|297621439|ref|YP_003709576.1|	-	0.12	12.3	0.2	0.24	11.3	0.2	1.4	1	0	0	1	1	1	0	Peptidase	family	S49
Aminotran_3	PF00202.21	gi|297621440|ref|YP_003709577.1|	-	1.3e-66	225.0	0.0	1.6e-66	224.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Bac_surface_Ag	PF01103.23	gi|297621441|ref|YP_003709578.1|	-	1.9e-43	149.2	2.0	3.3e-43	148.4	2.0	1.4	1	1	0	1	1	1	1	Surface	antigen
POTRA	PF07244.15	gi|297621441|ref|YP_003709578.1|	-	2.7e-10	40.7	0.0	8.8e-05	23.0	0.0	3.6	4	0	0	4	4	4	3	Surface	antigen	variable	number	repeat
TamB	PF04357.13	gi|297621442|ref|YP_003709579.1|	-	2.3e-55	188.4	2.0	8.3e-55	186.6	1.0	2.2	2	1	1	3	3	3	1	TamB,	inner	membrane	protein	subunit	of	TAM	complex
DUF1073	PF06381.11	gi|297621443|ref|YP_003709580.1|	-	0.063	12.1	0.1	0.094	11.5	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1073)
Prefoldin_2	PF01920.20	gi|297621443|ref|YP_003709580.1|	-	0.11	12.5	1.9	0.29	11.1	1.9	1.7	1	0	0	1	1	1	0	Prefoldin	subunit
MRP-L28	PF09812.9	gi|297621443|ref|YP_003709580.1|	-	2.4	8.3	4.4	10	6.2	0.7	2.4	2	0	0	2	2	2	0	Mitochondrial	ribosomal	protein	L28
GATase_7	PF13537.6	gi|297621444|ref|YP_003709581.1|	-	4.4e-39	133.2	0.0	1e-38	132.0	0.0	1.7	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Asn_synthase	PF00733.21	gi|297621444|ref|YP_003709581.1|	-	4.4e-38	131.8	0.6	1.5e-37	130.1	0.1	2.0	3	0	0	3	3	3	1	Asparagine	synthase
GATase_6	PF13522.6	gi|297621444|ref|YP_003709581.1|	-	2.8e-35	121.4	0.0	1.3e-34	119.3	0.0	2.1	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
ATPgrasp_ST	PF14397.6	gi|297621445|ref|YP_003709582.1|	-	0.021	14.1	0.0	0.035	13.3	0.0	1.4	1	0	0	1	1	1	0	Sugar-transfer	associated	ATP-grasp
GARS_A	PF01071.19	gi|297621445|ref|YP_003709582.1|	-	0.041	13.6	0.0	0.083	12.6	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATPgrasp_YheCD	PF14398.6	gi|297621445|ref|YP_003709582.1|	-	0.071	12.3	0.0	0.1	11.8	0.0	1.2	1	0	0	1	1	1	0	YheC/D	like	ATP-grasp
ATP-grasp_4	PF13535.6	gi|297621445|ref|YP_003709582.1|	-	0.14	11.7	0.0	0.29	10.7	0.0	1.5	1	0	0	1	1	1	0	ATP-grasp	domain
MlaE	PF02405.16	gi|297621446|ref|YP_003709583.1|	-	1.7e-72	243.5	20.5	2.1e-72	243.2	20.5	1.1	1	0	0	1	1	1	1	Permease	MlaE
FtsX	PF02687.21	gi|297621446|ref|YP_003709583.1|	-	0.01	16.3	3.1	0.01	16.3	3.1	3.0	2	1	1	3	3	3	0	FtsX-like	permease	family
ABC_tran	PF00005.27	gi|297621447|ref|YP_003709584.1|	-	1.1e-29	103.7	0.0	1.5e-29	103.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|297621447|ref|YP_003709584.1|	-	0.00014	21.4	0.0	0.00027	20.5	0.0	1.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|297621447|ref|YP_003709584.1|	-	0.00057	19.8	0.0	0.12	12.2	0.0	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
RsgA_GTPase	PF03193.16	gi|297621447|ref|YP_003709584.1|	-	0.00066	19.6	0.5	0.0011	18.9	0.2	1.5	2	0	0	2	2	2	1	RsgA	GTPase
AAA_16	PF13191.6	gi|297621447|ref|YP_003709584.1|	-	0.0029	18.0	0.1	0.0047	17.3	0.1	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
MMR_HSR1	PF01926.23	gi|297621447|ref|YP_003709584.1|	-	0.011	15.8	0.1	0.039	14.0	0.0	1.9	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
IstB_IS21	PF01695.17	gi|297621447|ref|YP_003709584.1|	-	0.015	15.0	0.1	0.094	12.4	0.0	2.0	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
ATPase_2	PF01637.18	gi|297621447|ref|YP_003709584.1|	-	0.017	15.1	0.1	0.027	14.4	0.1	1.4	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
NACHT	PF05729.12	gi|297621447|ref|YP_003709584.1|	-	0.017	15.0	0.0	0.035	14.0	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
ATP-synt_ab	PF00006.25	gi|297621447|ref|YP_003709584.1|	-	0.043	13.5	0.0	0.044	13.4	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_7	PF12775.7	gi|297621447|ref|YP_003709584.1|	-	0.044	13.3	0.0	0.098	12.2	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
NB-ARC	PF00931.22	gi|297621447|ref|YP_003709584.1|	-	0.055	12.7	0.2	0.096	11.8	0.2	1.3	1	0	0	1	1	1	0	NB-ARC	domain
DLIC	PF05783.11	gi|297621447|ref|YP_003709584.1|	-	0.064	12.1	0.1	0.093	11.6	0.1	1.2	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
DAP3	PF10236.9	gi|297621447|ref|YP_003709584.1|	-	0.065	12.4	0.0	0.12	11.6	0.0	1.4	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
Roc	PF08477.13	gi|297621447|ref|YP_003709584.1|	-	0.073	13.3	0.2	0.19	11.9	0.1	1.7	1	1	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_29	PF13555.6	gi|297621447|ref|YP_003709584.1|	-	0.078	12.7	0.1	0.16	11.8	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|297621447|ref|YP_003709584.1|	-	0.16	12.2	0.2	0.28	11.5	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
MlaD	PF02470.20	gi|297621448|ref|YP_003709585.1|	-	3.7e-13	49.6	0.3	7.1e-13	48.7	0.3	1.5	1	0	0	1	1	1	1	MlaD	protein
SesA	PF17107.5	gi|297621448|ref|YP_003709585.1|	-	0.033	14.4	0.0	0.071	13.3	0.0	1.5	1	0	0	1	1	1	0	N-terminal	domain	on	NACHT_NTPase	and	P-loop	NTPases
Vhr1	PF04001.13	gi|297621448|ref|YP_003709585.1|	-	0.044	14.1	0.2	0.17	12.2	0.1	2.0	2	0	0	2	2	2	0	Transcription	factor	Vhr1
Sulfatase_C	PF14707.6	gi|297621448|ref|YP_003709585.1|	-	0.084	13.6	0.3	0.75	10.5	0.0	2.3	2	1	0	2	2	2	0	C-terminal	region	of	aryl-sulfatase
DUF1664	PF07889.12	gi|297621448|ref|YP_003709585.1|	-	0.11	12.6	2.2	0.58	10.2	0.2	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1664)
Baculo_PEP_C	PF04513.12	gi|297621448|ref|YP_003709585.1|	-	0.13	12.2	1.2	0.64	10.1	0.4	2.2	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
MscS_porin	PF12795.7	gi|297621448|ref|YP_003709585.1|	-	0.14	11.7	0.1	1.5	8.3	0.0	2.1	2	0	0	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
GerD	PF17898.1	gi|297621448|ref|YP_003709585.1|	-	0.21	11.6	1.0	0.42	10.6	0.2	1.9	2	0	0	2	2	2	0	Spore	germination	GerD	central	core	domain
MCPsignal	PF00015.21	gi|297621448|ref|YP_003709585.1|	-	0.3	10.9	2.0	2.8	7.7	1.0	2.6	2	1	1	3	3	3	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Laminin_II	PF06009.12	gi|297621448|ref|YP_003709585.1|	-	1.6	8.8	5.1	0.36	10.8	0.6	2.2	3	0	0	3	3	3	0	Laminin	Domain	II
DUF179	PF02622.15	gi|297621449|ref|YP_003709586.1|	-	4.4e-39	134.0	0.0	5e-39	133.8	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1678
Ribosomal_S9	PF00380.19	gi|297621450|ref|YP_003709587.1|	-	6.4e-43	146.1	0.5	7.2e-43	146.0	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
Ribosomal_L13	PF00572.18	gi|297621451|ref|YP_003709588.1|	-	8.1e-52	174.7	0.2	1.1e-51	174.4	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13
Radical_SAM	PF04055.21	gi|297621452|ref|YP_003709589.1|	-	7.8e-30	104.5	0.7	2.7e-29	102.7	0.2	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.20	gi|297621452|ref|YP_003709589.1|	-	7.1e-29	99.7	0.0	2.2e-28	98.2	0.0	1.9	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.20	gi|297621452|ref|YP_003709589.1|	-	6.4e-06	26.1	0.0	1.6e-05	24.8	0.0	1.8	1	0	0	1	1	1	1	TRAM	domain
TRAM_2	PF18693.1	gi|297621452|ref|YP_003709589.1|	-	0.045	13.9	0.4	0.56	10.4	0.4	2.5	1	1	0	1	1	1	0	TRAM	domain
Sod_Cu	PF00080.20	gi|297621453|ref|YP_003709590.1|	-	5e-42	143.4	4.6	5e-42	143.4	4.6	1.4	2	0	0	2	2	2	1	Copper/zinc	superoxide	dismutase	(SODC)
DNA_ligase_aden	PF01653.18	gi|297621454|ref|YP_003709591.1|	-	7.9e-112	373.4	0.0	1.1e-111	373.0	0.0	1.2	1	0	0	1	1	1	1	NAD-dependent	DNA	ligase	adenylation	domain
DNA_ligase_OB	PF03120.16	gi|297621454|ref|YP_003709591.1|	-	4.6e-33	113.0	1.4	8.6e-33	112.1	1.4	1.5	1	0	0	1	1	1	1	NAD-dependent	DNA	ligase	OB-fold	domain
HHH_2	PF12826.7	gi|297621454|ref|YP_003709591.1|	-	3e-19	68.9	0.7	1.7e-18	66.5	0.2	2.4	2	1	0	2	2	2	1	Helix-hairpin-helix	motif
BRCT	PF00533.26	gi|297621454|ref|YP_003709591.1|	-	7.7e-18	64.7	0.0	2.4e-17	63.1	0.0	2.0	1	0	0	1	1	1	1	BRCA1	C	Terminus	(BRCT)	domain
HHH_5	PF14520.6	gi|297621454|ref|YP_003709591.1|	-	1.8e-13	50.9	0.9	1e-05	26.1	0.1	2.6	2	0	0	2	2	2	2	Helix-hairpin-helix	domain
DNA_ligase_ZBD	PF03119.16	gi|297621454|ref|YP_003709591.1|	-	2.6e-07	30.5	8.9	2.6e-07	30.5	8.9	2.2	2	0	0	2	2	2	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
HHH	PF00633.23	gi|297621454|ref|YP_003709591.1|	-	5.2e-06	26.1	0.3	3.7e-05	23.4	0.1	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
PTCB-BRCT	PF12738.7	gi|297621454|ref|YP_003709591.1|	-	6e-06	26.1	0.0	1.7e-05	24.6	0.0	1.8	1	0	0	1	1	1	1	twin	BRCT	domain
HHH_3	PF12836.7	gi|297621454|ref|YP_003709591.1|	-	0.00029	21.0	0.4	0.059	13.6	0.1	3.0	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
zf-NADH-PPase	PF09297.11	gi|297621454|ref|YP_003709591.1|	-	0.00031	20.3	0.9	0.00068	19.2	0.9	1.5	1	0	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
5_3_exonuc	PF01367.20	gi|297621454|ref|YP_003709591.1|	-	0.036	14.7	1.7	0.79	10.4	0.1	3.4	2	1	2	4	4	4	0	5'-3'	exonuclease,	C-terminal	SAM	fold
Auto_anti-p27	PF06677.12	gi|297621454|ref|YP_003709591.1|	-	0.048	13.8	0.6	0.14	12.3	0.6	1.7	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
BRCT_2	PF16589.5	gi|297621454|ref|YP_003709591.1|	-	0.079	13.4	0.0	0.21	12.0	0.0	1.7	1	0	0	1	1	1	0	BRCT	domain,	a	BRCA1	C-terminus	domain
RNA_pol_A_CTD	PF03118.15	gi|297621454|ref|YP_003709591.1|	-	0.18	11.6	1.0	6	6.7	0.0	3.0	2	1	1	3	3	3	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
Calmodulin_bind	PF07887.11	gi|297621455|ref|YP_003709592.1|	-	0.0049	16.2	0.0	0.0079	15.5	0.0	1.2	1	0	0	1	1	1	1	Calmodulin	binding	protein-like
Radical_SAM	PF04055.21	gi|297621456|ref|YP_003709593.1|	-	1.9e-27	96.7	0.5	1.2e-26	94.0	0.2	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.20	gi|297621456|ref|YP_003709593.1|	-	4.5e-26	90.8	0.3	9.5e-26	89.7	0.3	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
Lipase_3	PF01764.25	gi|297621456|ref|YP_003709593.1|	-	0.038	13.9	0.0	1.4	8.8	0.0	2.7	2	1	0	2	2	2	0	Lipase	(class	3)
Amino_oxidase	PF01593.24	gi|297621457|ref|YP_003709594.1|	-	4.6e-27	95.4	0.0	3.5e-26	92.5	0.0	2.2	1	1	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.6	gi|297621457|ref|YP_003709594.1|	-	7.2e-19	67.8	0.0	1.7e-18	66.6	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.24	gi|297621457|ref|YP_003709594.1|	-	8.6e-12	45.3	0.0	1.5e-11	44.5	0.0	1.4	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|297621457|ref|YP_003709594.1|	-	0.00018	20.3	0.0	0.0032	16.2	0.0	2.2	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox	PF00070.27	gi|297621457|ref|YP_003709594.1|	-	0.00034	21.1	0.0	0.0027	18.2	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|297621457|ref|YP_003709594.1|	-	0.00057	19.2	0.0	0.002	17.4	0.0	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.16	gi|297621457|ref|YP_003709594.1|	-	0.0042	16.7	0.0	0.17	11.5	0.0	2.2	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
FAD_binding_2	PF00890.24	gi|297621457|ref|YP_003709594.1|	-	0.0046	16.1	0.0	0.0069	15.5	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Thi4	PF01946.17	gi|297621457|ref|YP_003709594.1|	-	0.0058	15.9	0.0	0.011	15.0	0.0	1.3	1	0	0	1	1	1	1	Thi4	family
FMO-like	PF00743.19	gi|297621457|ref|YP_003709594.1|	-	0.025	13.0	0.0	0.037	12.4	0.0	1.2	1	0	0	1	1	1	0	Flavin-binding	monooxygenase-like
FAD_binding_3	PF01494.19	gi|297621457|ref|YP_003709594.1|	-	0.046	13.0	0.0	0.072	12.3	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
DUF4880	PF16220.5	gi|297621457|ref|YP_003709594.1|	-	0.1	12.5	0.9	0.17	11.8	0.9	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4880)
GIDA	PF01134.22	gi|297621457|ref|YP_003709594.1|	-	0.14	11.2	0.0	0.21	10.6	0.0	1.3	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.6	gi|297621457|ref|YP_003709594.1|	-	0.14	11.4	0.2	0.31	10.3	0.0	1.6	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
MCRA	PF06100.11	gi|297621457|ref|YP_003709594.1|	-	0.19	10.5	0.0	0.37	9.5	0.0	1.4	1	0	0	1	1	1	0	MCRA	family
NAD_binding_9	PF13454.6	gi|297621457|ref|YP_003709594.1|	-	0.23	11.4	0.1	0.97	9.4	0.0	2.1	2	0	0	2	2	2	0	FAD-NAD(P)-binding
MotA_ExbB	PF01618.16	gi|297621458|ref|YP_003709595.1|	-	0.073	12.8	2.3	3.9	7.2	0.2	2.2	2	0	0	2	2	2	0	MotA/TolQ/ExbB	proton	channel	family
RadC	PF04002.15	gi|297621459|ref|YP_003709596.1|	-	2.3e-40	137.3	0.1	3.4e-40	136.8	0.1	1.2	1	0	0	1	1	1	1	RadC-like	JAB	domain
HHH_2	PF12826.7	gi|297621459|ref|YP_003709596.1|	-	1.5e-05	25.0	0.1	3.5e-05	23.8	0.1	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Prok-JAB	PF14464.6	gi|297621459|ref|YP_003709596.1|	-	3.9e-05	23.4	0.0	5.5e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
GTP-bdg_M	PF16360.5	gi|297621460|ref|YP_003709597.1|	-	3.3e-28	98.1	6.4	8.6e-28	96.8	6.4	1.7	1	0	0	1	1	1	1	GTP-binding	GTPase	Middle	Region
GTP-bdg_N	PF13167.6	gi|297621460|ref|YP_003709597.1|	-	2.4e-25	89.0	0.0	6.5e-25	87.6	0.0	1.8	1	0	0	1	1	1	1	GTP-binding	GTPase	N-terminal
MMR_HSR1	PF01926.23	gi|297621460|ref|YP_003709597.1|	-	1.9e-21	76.3	0.1	4.6e-21	75.0	0.1	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU	PF00009.27	gi|297621460|ref|YP_003709597.1|	-	5.3e-08	32.6	0.7	2.2e-05	24.1	0.7	2.5	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
FeoB_N	PF02421.18	gi|297621460|ref|YP_003709597.1|	-	2.9e-07	30.2	0.1	7.9e-07	28.7	0.1	1.8	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
RsgA_GTPase	PF03193.16	gi|297621460|ref|YP_003709597.1|	-	2.1e-06	27.8	2.0	0.0022	17.9	0.1	2.8	3	0	0	3	3	3	2	RsgA	GTPase
Dynamin_N	PF00350.23	gi|297621460|ref|YP_003709597.1|	-	2.7e-05	24.3	0.2	0.008	16.2	0.0	2.6	1	1	1	2	2	2	1	Dynamin	family
Arf	PF00025.21	gi|297621460|ref|YP_003709597.1|	-	6.2e-05	22.5	0.7	0.00034	20.1	0.7	2.1	1	1	0	1	1	1	1	ADP-ribosylation	factor	family
AAA_23	PF13476.6	gi|297621460|ref|YP_003709597.1|	-	0.00014	22.4	1.2	0.0006	20.4	0.6	2.3	1	1	0	1	1	1	1	AAA	domain
cobW	PF02492.19	gi|297621460|ref|YP_003709597.1|	-	0.00016	21.3	2.0	0.034	13.7	0.2	2.6	1	1	1	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
MMR_HSR1_Xtn	PF16897.5	gi|297621460|ref|YP_003709597.1|	-	0.00029	20.8	0.1	0.00078	19.4	0.1	1.8	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
ABC_tran	PF00005.27	gi|297621460|ref|YP_003709597.1|	-	0.0014	19.2	0.0	0.0039	17.7	0.0	1.9	1	1	0	1	1	1	1	ABC	transporter
AAA_16	PF13191.6	gi|297621460|ref|YP_003709597.1|	-	0.0015	19.0	0.3	0.0027	18.1	0.3	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
G-alpha	PF00503.20	gi|297621460|ref|YP_003709597.1|	-	0.0022	17.3	0.3	0.51	9.4	0.1	2.2	2	0	0	2	2	2	2	G-protein	alpha	subunit
ATP_bind_1	PF03029.17	gi|297621460|ref|YP_003709597.1|	-	0.0028	17.5	1.7	0.061	13.1	0.3	2.7	2	1	1	3	3	3	1	Conserved	hypothetical	ATP	binding	protein
Ras	PF00071.22	gi|297621460|ref|YP_003709597.1|	-	0.0036	16.9	0.0	0.0067	16.0	0.0	1.5	1	1	0	1	1	1	1	Ras	family
SRPRB	PF09439.10	gi|297621460|ref|YP_003709597.1|	-	0.0087	15.5	0.3	0.019	14.4	0.3	1.6	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Diphthamide_syn	PF01866.17	gi|297621460|ref|YP_003709597.1|	-	0.0098	15.4	0.5	0.04	13.3	0.4	2.0	1	1	1	2	2	2	1	Putative	diphthamide	synthesis	protein
MnmE_helical	PF12631.7	gi|297621460|ref|YP_003709597.1|	-	0.018	15.2	0.4	0.037	14.2	0.4	1.5	1	0	0	1	1	1	0	MnmE	helical	domain
AAA_29	PF13555.6	gi|297621460|ref|YP_003709597.1|	-	0.023	14.4	0.0	0.048	13.4	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Roc	PF08477.13	gi|297621460|ref|YP_003709597.1|	-	0.031	14.5	0.1	0.32	11.2	0.1	2.4	1	1	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
EXOSC1	PF10447.9	gi|297621460|ref|YP_003709597.1|	-	0.046	14.3	0.1	0.11	13.2	0.1	1.5	1	0	0	1	1	1	0	Exosome	component	EXOSC1/CSL4
AKNA	PF12443.8	gi|297621460|ref|YP_003709597.1|	-	0.092	13.4	0.9	4.8	7.9	0.0	2.7	2	0	0	2	2	2	0	AT-hook-containing	transcription	factor
NOG1	PF06858.14	gi|297621460|ref|YP_003709597.1|	-	0.14	12.0	0.0	0.4	10.5	0.0	1.8	1	0	0	1	1	1	0	Nucleolar	GTP-binding	protein	1	(NOG1)
Lactamase_B_2	PF12706.7	gi|297621461|ref|YP_003709598.1|	-	7.1e-28	97.5	0.1	9.6e-28	97.1	0.1	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|297621461|ref|YP_003709598.1|	-	2.2e-10	40.9	1.3	7.5e-10	39.1	1.0	1.8	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.6	gi|297621461|ref|YP_003709598.1|	-	0.0082	16.0	0.1	0.019	14.9	0.1	1.7	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Helitron_like_N	PF14214.6	gi|297621461|ref|YP_003709598.1|	-	0.033	14.4	0.0	0.041	14.1	0.0	1.2	1	0	0	1	1	1	0	Helitron	helicase-like	domain	at	N-terminus
DUF3672	PF12421.8	gi|297621462|ref|YP_003709599.1|	-	0.085	12.8	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	Fibronectin	type	III	protein
DAO	PF01266.24	gi|297621463|ref|YP_003709600.1|	-	4.1e-40	138.4	0.0	4.8e-40	138.2	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|297621463|ref|YP_003709600.1|	-	3.8e-07	30.2	0.1	9.2e-07	29.0	0.1	1.7	1	1	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.14	gi|297621463|ref|YP_003709600.1|	-	2.2e-05	23.9	0.0	5.8e-05	22.5	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|297621463|ref|YP_003709600.1|	-	0.0024	17.0	0.0	0.0034	16.5	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.27	gi|297621463|ref|YP_003709600.1|	-	0.0089	16.6	0.0	0.015	15.8	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|297621463|ref|YP_003709600.1|	-	0.0098	15.0	0.1	0.017	14.2	0.1	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|297621463|ref|YP_003709600.1|	-	0.017	14.3	0.0	0.043	13.1	0.0	1.6	2	0	0	2	2	2	0	Thi4	family
3HCDH_N	PF02737.18	gi|297621463|ref|YP_003709600.1|	-	0.023	14.6	0.0	0.037	13.9	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HI0933_like	PF03486.14	gi|297621463|ref|YP_003709600.1|	-	0.024	13.3	0.0	0.04	12.6	0.0	1.3	1	0	0	1	1	1	0	HI0933-like	protein
NAD_binding_9	PF13454.6	gi|297621463|ref|YP_003709600.1|	-	0.029	14.4	0.0	0.061	13.3	0.0	1.5	1	0	0	1	1	1	0	FAD-NAD(P)-binding
ApbA	PF02558.16	gi|297621463|ref|YP_003709600.1|	-	0.038	13.6	0.1	0.068	12.8	0.1	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.14	gi|297621463|ref|YP_003709600.1|	-	0.22	11.1	0.0	0.36	10.4	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FAD_binding_3	PF01494.19	gi|297621463|ref|YP_003709600.1|	-	0.27	10.4	0.0	0.52	9.5	0.0	1.4	1	0	0	1	1	1	0	FAD	binding	domain
Phage_holin_1	PF04531.13	gi|297621464|ref|YP_003709601.1|	-	0.051	14.1	0.5	10	6.7	0.1	3.0	3	0	0	3	3	3	0	Bacteriophage	holin
CagY_I	PF14585.6	gi|297621464|ref|YP_003709601.1|	-	0.54	10.4	2.6	4.1	7.6	0.2	2.8	2	1	1	3	3	3	0	CagY	type	1	repeat
DUF92	PF01940.16	gi|297621465|ref|YP_003709602.1|	-	3.7	6.9	13.4	0.24	10.8	0.5	2.9	1	1	0	2	2	2	0	Integral	membrane	protein	DUF92
Citrate_synt	PF00285.21	gi|297621466|ref|YP_003709603.1|	-	7.1e-86	288.5	0.0	8.1e-86	288.3	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase,	C-terminal	domain
SapB_1	PF05184.15	gi|297621466|ref|YP_003709603.1|	-	0.089	12.8	0.0	0.2	11.7	0.0	1.6	1	0	0	1	1	1	0	Saposin-like	type	B,	region	1
Ldh_1_C	PF02866.18	gi|297621467|ref|YP_003709604.1|	-	7.1e-34	117.1	0.0	1.8e-33	115.9	0.0	1.6	2	0	0	2	2	2	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
Ldh_1_N	PF00056.23	gi|297621467|ref|YP_003709604.1|	-	6e-31	107.4	0.0	9.2e-31	106.8	0.0	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Radical_SAM	PF04055.21	gi|297621468|ref|YP_003709605.1|	-	3e-14	53.7	0.0	6.3e-14	52.7	0.0	1.5	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|297621468|ref|YP_003709605.1|	-	4e-10	39.9	0.3	8.6e-10	38.8	0.2	1.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|297621468|ref|YP_003709605.1|	-	4.7e-05	23.7	0.1	8.3e-05	22.9	0.1	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
QueC	PF06508.13	gi|297621469|ref|YP_003709606.1|	-	1.3e-62	211.1	0.0	1.4e-62	210.9	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.21	gi|297621469|ref|YP_003709606.1|	-	6.2e-08	32.7	0.0	8.3e-08	32.3	0.0	1.1	1	0	0	1	1	1	1	Asparagine	synthase
ThiI	PF02568.14	gi|297621469|ref|YP_003709606.1|	-	3.2e-05	23.6	0.0	0.031	13.8	0.0	2.2	2	0	0	2	2	2	2	Thiamine	biosynthesis	protein	(ThiI)
PAPS_reduct	PF01507.19	gi|297621469|ref|YP_003709606.1|	-	6.7e-05	23.0	0.0	0.0019	18.3	0.0	2.1	2	0	0	2	2	2	1	Phosphoadenosine	phosphosulfate	reductase	family
NAD_synthase	PF02540.17	gi|297621469|ref|YP_003709606.1|	-	0.00013	21.2	0.0	0.00018	20.7	0.0	1.3	1	0	0	1	1	1	1	NAD	synthase
ATP_bind_3	PF01171.20	gi|297621469|ref|YP_003709606.1|	-	0.00037	20.3	0.0	0.0014	18.5	0.0	1.8	2	0	0	2	2	2	1	PP-loop	family
tRNA_Me_trans	PF03054.16	gi|297621469|ref|YP_003709606.1|	-	0.0098	14.7	0.0	0.013	14.3	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
RNA_pol_A_CTD	PF03118.15	gi|297621470|ref|YP_003709607.1|	-	0.005	16.6	0.0	0.01	15.6	0.0	1.5	1	0	0	1	1	1	1	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
CRS1_YhbY	PF01985.21	gi|297621470|ref|YP_003709607.1|	-	0.13	12.5	0.0	22	5.3	0.0	2.3	2	0	0	2	2	2	0	CRS1	/	YhbY	(CRM)	domain
CTP_transf_like	PF01467.26	gi|297621471|ref|YP_003709608.1|	-	0.19	11.9	0.9	1.7	8.9	0.2	2.2	2	0	0	2	2	2	0	Cytidylyltransferase-like
Y_phosphatase3	PF13350.6	gi|297621472|ref|YP_003709609.1|	-	0.00084	19.4	0.3	0.0064	16.5	0.0	2.4	2	1	0	3	3	3	1	Tyrosine	phosphatase	family
ADK	PF00406.22	gi|297621476|ref|YP_003709613.1|	-	5.2e-53	179.2	0.0	6.3e-53	178.9	0.0	1.1	1	0	0	1	1	1	1	Adenylate	kinase
AAA_17	PF13207.6	gi|297621476|ref|YP_003709613.1|	-	4e-25	88.8	0.0	6.4e-25	88.2	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
ADK_lid	PF05191.14	gi|297621476|ref|YP_003709613.1|	-	2.2e-12	46.7	0.7	4.1e-12	45.9	0.7	1.5	1	0	0	1	1	1	1	Adenylate	kinase,	active	site	lid
AAA_18	PF13238.6	gi|297621476|ref|YP_003709613.1|	-	2e-05	25.2	0.0	6.2e-05	23.6	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|297621476|ref|YP_003709613.1|	-	3.7e-05	23.9	0.0	6.9e-05	23.0	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
Hydin_ADK	PF17213.3	gi|297621476|ref|YP_003709613.1|	-	0.00012	22.5	0.2	0.2	11.9	0.0	2.5	2	1	1	3	3	3	2	Hydin	Adenylate	kinase-like	domain
Cytidylate_kin	PF02224.18	gi|297621476|ref|YP_003709613.1|	-	0.0014	18.5	0.0	0.0019	17.9	0.0	1.3	1	0	0	1	1	1	1	Cytidylate	kinase
AAA	PF00004.29	gi|297621476|ref|YP_003709613.1|	-	0.0025	18.3	0.0	0.0037	17.7	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.21	gi|297621476|ref|YP_003709613.1|	-	0.0025	17.2	0.0	0.0039	16.6	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
DUF1272	PF06906.11	gi|297621476|ref|YP_003709613.1|	-	0.032	14.3	0.7	0.072	13.2	0.7	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
RuvB_N	PF05496.12	gi|297621476|ref|YP_003709613.1|	-	0.032	14.0	0.0	0.056	13.2	0.0	1.3	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
ABC_tran	PF00005.27	gi|297621476|ref|YP_003709613.1|	-	0.044	14.3	0.0	0.052	14.1	0.0	1.3	1	0	0	1	1	1	0	ABC	transporter
ANF_receptor	PF01094.28	gi|297621476|ref|YP_003709613.1|	-	0.045	12.8	0.0	0.056	12.5	0.0	1.1	1	0	0	1	1	1	0	Receptor	family	ligand	binding	region
AAA_22	PF13401.6	gi|297621476|ref|YP_003709613.1|	-	0.059	13.6	0.0	0.11	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.14	gi|297621476|ref|YP_003709613.1|	-	0.087	12.8	0.0	0.18	11.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.6	gi|297621476|ref|YP_003709613.1|	-	0.11	12.7	0.0	0.16	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|297621476|ref|YP_003709613.1|	-	0.16	11.9	0.0	0.41	10.5	0.0	1.7	2	0	0	2	2	2	0	NACHT	domain
Zeta_toxin	PF06414.12	gi|297621476|ref|YP_003709613.1|	-	0.17	11.2	0.1	0.28	10.4	0.1	1.6	1	1	0	1	1	1	0	Zeta	toxin
AAA_30	PF13604.6	gi|297621476|ref|YP_003709613.1|	-	0.22	11.2	0.0	0.38	10.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
MutS_III	PF05192.18	gi|297621477|ref|YP_003709614.1|	-	0.08	13.2	0.1	0.1	12.8	0.1	1.2	1	0	0	1	1	1	0	MutS	domain	III
Ank_2	PF12796.7	gi|297621479|ref|YP_003709616.1|	-	1.7e-15	57.3	0.0	0.02	15.4	0.0	5.0	3	2	1	5	5	5	5	Ankyrin	repeats	(3	copies)
Ank_4	PF13637.6	gi|297621479|ref|YP_003709616.1|	-	8.7e-13	48.5	0.0	0.28	11.8	0.0	6.9	5	1	1	6	6	6	4	Ankyrin	repeats	(many	copies)
Ank_5	PF13857.6	gi|297621479|ref|YP_003709616.1|	-	7.9e-09	35.6	0.1	1.2	9.5	0.0	6.4	5	2	0	5	5	5	2	Ankyrin	repeats	(many	copies)
Ank	PF00023.30	gi|297621479|ref|YP_003709616.1|	-	6e-08	32.8	0.1	1.2	9.7	0.0	7.0	6	2	0	6	6	6	1	Ankyrin	repeat
Ank_3	PF13606.6	gi|297621479|ref|YP_003709616.1|	-	1.1e-07	31.5	0.0	10	7.1	0.0	7.6	9	0	0	9	9	9	1	Ankyrin	repeat
Chalcone_3	PF16036.5	gi|297621480|ref|YP_003709617.1|	-	8e-27	94.4	0.0	1.1e-26	94.0	0.0	1.1	1	0	0	1	1	1	1	Chalcone	isomerase-like
Chalcone_2	PF16035.5	gi|297621480|ref|YP_003709617.1|	-	0.0019	18.0	0.0	0.0033	17.2	0.0	1.3	1	1	0	1	1	1	1	Chalcone	isomerase	like
Hist_deacetyl	PF00850.19	gi|297621481|ref|YP_003709618.1|	-	9.7e-87	291.3	0.0	1.1e-86	291.1	0.0	1.0	1	0	0	1	1	1	1	Histone	deacetylase	domain
Lipase_GDSL_2	PF13472.6	gi|297621481|ref|YP_003709618.1|	-	0.074	13.4	0.1	0.55	10.6	0.0	2.2	2	0	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase	family
Na_sulph_symp	PF00939.19	gi|297621482|ref|YP_003709619.1|	-	5.8e-139	464.2	41.1	7.2e-139	463.9	41.1	1.0	1	0	0	1	1	1	1	Sodium:sulfate	symporter	transmembrane	region
CitMHS	PF03600.16	gi|297621482|ref|YP_003709619.1|	-	1.4e-16	60.6	37.2	1.7e-16	60.3	28.8	2.2	1	1	1	2	2	2	2	Citrate	transporter
H_PPase	PF03030.16	gi|297621483|ref|YP_003709620.1|	-	4.9e-262	871.3	38.6	5.7e-262	871.1	38.6	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
AA_permease_2	PF13520.6	gi|297621484|ref|YP_003709621.1|	-	2.6e-70	237.4	51.2	3.1e-70	237.1	51.2	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.21	gi|297621484|ref|YP_003709621.1|	-	2.2e-27	95.8	41.3	2.9e-27	95.4	41.3	1.0	1	0	0	1	1	1	1	Amino	acid	permease
DUF2535	PF10751.9	gi|297621485|ref|YP_003709622.1|	-	0.077	13.5	1.8	0.091	13.3	0.1	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2535)
DUF2207	PF09972.9	gi|297621485|ref|YP_003709622.1|	-	0.089	11.5	0.1	0.14	10.9	0.1	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
HTH_56	PF18662.1	gi|297621485|ref|YP_003709622.1|	-	0.17	11.9	2.7	0.9	9.6	0.4	2.5	2	0	0	2	2	2	0	Cch	helix	turn	helix	domain
FMN_red	PF03358.15	gi|297621486|ref|YP_003709623.1|	-	2.3e-37	128.1	0.0	2.7e-37	127.9	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|297621486|ref|YP_003709623.1|	-	5.8e-11	42.5	0.0	6.8e-11	42.3	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
Host_attach	PF10116.9	gi|297621487|ref|YP_003709624.1|	-	4.5e-35	121.2	0.0	5.1e-35	121.0	0.0	1.0	1	0	0	1	1	1	1	Protein	required	for	attachment	to	host	cells
baeRF_family12	PF18856.1	gi|297621487|ref|YP_003709624.1|	-	5.6e-24	85.3	0.0	6.7e-24	85.0	0.0	1.0	1	0	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	12
baeRF_family3	PF18845.1	gi|297621487|ref|YP_003709624.1|	-	0.0057	16.9	0.0	0.0072	16.6	0.0	1.0	1	0	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	3
Wyosine_form	PF08608.12	gi|297621487|ref|YP_003709624.1|	-	0.033	14.6	0.0	0.055	13.8	0.0	1.3	1	0	0	1	1	1	0	Wyosine	base	formation
Sel1	PF08238.12	gi|297621489|ref|YP_003709626.1|	-	2.2e-145	469.8	80.7	4.3e-10	39.9	0.2	16.5	16	1	1	17	17	17	16	Sel1	repeat
TPR_6	PF13174.6	gi|297621489|ref|YP_003709626.1|	-	6.5e-07	29.6	24.0	1.6	9.6	0.1	9.2	9	0	0	9	9	9	3	Tetratricopeptide	repeat
Par3_HAL_N_term	PF12053.8	gi|297621489|ref|YP_003709626.1|	-	0.036	14.3	0.2	10	6.4	0.0	4.2	3	1	2	5	5	5	0	N-terminal	of	Par3	and	HAL	proteins
TPR_14	PF13428.6	gi|297621489|ref|YP_003709626.1|	-	0.15	13.0	16.6	34	5.6	0.0	8.5	9	2	1	10	10	10	0	Tetratricopeptide	repeat
Flu_M1_C	PF08289.11	gi|297621489|ref|YP_003709626.1|	-	0.8	10.0	5.1	39	4.5	0.1	4.4	5	1	0	5	5	5	0	Influenza	Matrix	protein	(M1)	C-terminal	domain
TPR_7	PF13176.6	gi|297621489|ref|YP_003709626.1|	-	0.81	9.9	27.8	8.9	6.6	0.1	9.8	10	2	1	11	11	11	0	Tetratricopeptide	repeat
Flavi_M	PF01004.19	gi|297621490|ref|YP_003709627.1|	-	0.019	14.7	0.1	0.021	14.5	0.1	1.2	1	0	0	1	1	1	0	Flavivirus	envelope	glycoprotein	M
ATP-synt_8	PF00895.20	gi|297621490|ref|YP_003709627.1|	-	0.1	13.1	1.3	0.13	12.7	1.3	1.3	1	0	0	1	1	1	0	ATP	synthase	protein	8
MDD_C	PF18376.1	gi|297621491|ref|YP_003709628.1|	-	0.0022	17.7	1.1	0.0027	17.5	1.1	1.0	1	0	0	1	1	1	1	Mevalonate	5-diphosphate	decarboxylase	C-terminal	domain
DUF1931	PF09123.11	gi|297621491|ref|YP_003709628.1|	-	0.012	15.7	0.6	0.014	15.5	0.6	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1931)
Alb1	PF09135.11	gi|297621491|ref|YP_003709628.1|	-	0.017	16.0	2.2	0.021	15.7	2.2	1.1	1	0	0	1	1	1	0	Alb1
DUF5395	PF17373.2	gi|297621491|ref|YP_003709628.1|	-	0.043	14.5	0.3	0.051	14.2	0.3	1.0	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5395)
CBFD_NFYB_HMF	PF00808.23	gi|297621491|ref|YP_003709628.1|	-	0.13	12.6	2.0	0.23	11.8	2.0	1.4	1	1	0	1	1	1	0	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Acyl-CoA_dh_1	PF00441.24	gi|297621492|ref|YP_003709629.1|	-	1.6e-31	109.5	3.9	8.1e-31	107.3	1.0	2.2	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|297621492|ref|YP_003709629.1|	-	4.4e-21	74.9	0.1	9e-21	73.9	0.1	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_N	PF02771.16	gi|297621492|ref|YP_003709629.1|	-	4.7e-20	72.3	0.0	1.7e-19	70.5	0.0	2.0	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
HpaB_N	PF11794.8	gi|297621492|ref|YP_003709629.1|	-	2.1e-06	27.6	0.1	4.2e-06	26.6	0.1	1.5	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
Acyl-CoA_dh_2	PF08028.11	gi|297621492|ref|YP_003709629.1|	-	0.0019	18.5	1.0	0.0072	16.6	0.2	2.4	2	1	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
DUF1974	PF09317.11	gi|297621492|ref|YP_003709629.1|	-	0.085	12.4	0.2	0.14	11.7	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1974)
TrmO	PF01980.16	gi|297621492|ref|YP_003709629.1|	-	0.17	12.1	0.0	0.33	11.2	0.0	1.4	1	0	0	1	1	1	0	tRNA-methyltransferase	O
Legionella_OMP	PF05150.12	gi|297621493|ref|YP_003709630.1|	-	1.9e-25	89.4	0.0	2.5e-25	89.0	0.0	1.1	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
Legionella_OMP	PF05150.12	gi|297621494|ref|YP_003709631.1|	-	5.5e-26	91.1	0.0	6.8e-26	90.8	0.0	1.0	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
3HCDH_N	PF02737.18	gi|297621495|ref|YP_003709632.1|	-	4.2e-60	202.7	0.1	2.9e-59	200.0	0.0	2.1	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH_1	PF00378.20	gi|297621495|ref|YP_003709632.1|	-	1.3e-37	129.5	0.0	2.3e-37	128.7	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
ECH_2	PF16113.5	gi|297621495|ref|YP_003709632.1|	-	7.2e-32	111.2	0.0	1.3e-31	110.4	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
3HCDH	PF00725.22	gi|297621495|ref|YP_003709632.1|	-	3.7e-27	94.8	0.3	5.7e-21	74.9	0.1	2.7	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
Thiolase_N	PF00108.23	gi|297621496|ref|YP_003709633.1|	-	1.1e-76	257.6	0.0	1.5e-76	257.2	0.0	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|297621496|ref|YP_003709633.1|	-	6.2e-45	151.8	0.3	1.4e-44	150.6	0.3	1.6	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.26	gi|297621496|ref|YP_003709633.1|	-	1.7e-08	34.3	0.2	1.9e-07	30.9	0.0	2.4	2	0	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.10	gi|297621496|ref|YP_003709633.1|	-	0.017	14.9	0.2	1.9	8.4	0.1	2.4	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
AMP-binding	PF00501.28	gi|297621497|ref|YP_003709634.1|	-	1.2e-81	274.6	0.0	1.8e-81	273.9	0.0	1.3	1	0	0	1	1	1	1	AMP-binding	enzyme
DUF643	PF04867.12	gi|297621498|ref|YP_003709635.1|	-	0.0035	18.0	0.3	0.036	14.7	0.0	2.1	1	1	0	2	2	2	1	Protein	of	unknown	function	(DUF643)
BAR_3	PF16746.5	gi|297621498|ref|YP_003709635.1|	-	0.015	15.0	0.8	0.03	14.0	0.7	1.5	1	1	1	2	2	2	0	BAR	domain	of	APPL	family
Trp_dioxygenase	PF03301.13	gi|297621498|ref|YP_003709635.1|	-	0.017	14.5	0.5	0.024	14.0	0.5	1.4	1	1	0	1	1	1	0	Tryptophan	2,3-dioxygenase
Peptidase_C98	PF15499.6	gi|297621498|ref|YP_003709635.1|	-	0.02	14.4	0.1	0.026	14.0	0.1	1.1	1	0	0	1	1	1	0	Ubiquitin-specific	peptidase-like,	SUMO	isopeptidase
LemA	PF04011.12	gi|297621498|ref|YP_003709635.1|	-	0.024	14.5	0.1	0.046	13.6	0.1	1.4	1	0	0	1	1	1	0	LemA	family
Cauli_AT	PF03233.13	gi|297621498|ref|YP_003709635.1|	-	0.025	14.5	0.8	0.057	13.3	0.5	1.7	2	0	0	2	2	2	0	Aphid	transmission	protein
DUF447	PF04289.12	gi|297621498|ref|YP_003709635.1|	-	0.039	13.8	0.3	0.053	13.3	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF447)
Sec5	PF15469.6	gi|297621498|ref|YP_003709635.1|	-	0.041	13.7	1.1	0.28	11.0	0.5	1.9	1	1	0	2	2	2	0	Exocyst	complex	component	Sec5
Hrs_helical	PF12210.8	gi|297621498|ref|YP_003709635.1|	-	0.052	14.1	0.2	3.9	8.1	0.0	2.5	1	1	1	2	2	2	0	Hepatocyte	growth	factor-regulated	tyrosine	kinase	substrate
HMGL-like	PF00682.19	gi|297621498|ref|YP_003709635.1|	-	0.078	12.5	0.0	0.095	12.2	0.0	1.2	1	0	0	1	1	1	0	HMGL-like
FlaC_arch	PF05377.11	gi|297621498|ref|YP_003709635.1|	-	1.4	9.4	4.0	4.3	7.8	0.0	3.1	3	1	0	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
DDE_3	PF13358.6	gi|297621499|ref|YP_003709636.1|	-	1.6e-30	105.8	0.0	2.6e-30	105.1	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.6	gi|297621499|ref|YP_003709636.1|	-	3.4e-17	61.8	0.1	1e-16	60.3	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|297621499|ref|YP_003709636.1|	-	1.8e-06	27.9	0.0	6.4e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|297621499|ref|YP_003709636.1|	-	9e-06	25.3	0.0	2.2e-05	24.1	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297621499|ref|YP_003709636.1|	-	1.3e-05	25.2	0.0	4.8e-05	23.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.26	gi|297621499|ref|YP_003709636.1|	-	3.5e-05	24.0	0.0	0.00038	20.6	0.0	2.2	2	0	0	2	2	2	1	Integrase	core	domain
DDE_Tnp_ISAZ013	PF07592.11	gi|297621499|ref|YP_003709636.1|	-	0.00011	21.4	0.3	0.21	10.5	0.1	2.2	2	0	0	2	2	2	2	Rhodopirellula	transposase	DDE	domain
Sigma70_r4_2	PF08281.12	gi|297621499|ref|YP_003709636.1|	-	0.00037	20.1	0.0	0.00077	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Terminase_5	PF06056.12	gi|297621499|ref|YP_003709636.1|	-	0.00062	19.6	0.0	0.0013	18.5	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_40	PF14493.6	gi|297621499|ref|YP_003709636.1|	-	0.0036	17.7	0.1	0.016	15.7	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|297621499|ref|YP_003709636.1|	-	0.0063	16.0	0.0	0.017	14.6	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
rve_3	PF13683.6	gi|297621499|ref|YP_003709636.1|	-	0.031	14.1	0.0	0.095	12.5	0.0	1.9	1	0	0	1	1	1	0	Integrase	core	domain
HTH_38	PF13936.6	gi|297621499|ref|YP_003709636.1|	-	0.038	13.8	1.6	0.43	10.4	0.0	2.7	3	0	0	3	3	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|297621499|ref|YP_003709636.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.7	gi|297621499|ref|YP_003709636.1|	-	0.13	12.3	0.0	0.28	11.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.19	gi|297621499|ref|YP_003709636.1|	-	0.16	11.5	0.0	0.65	9.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.6	gi|297621499|ref|YP_003709636.1|	-	0.86	9.9	3.6	5.9	7.2	0.1	3.1	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
ATG22	PF11700.8	gi|297621500|ref|YP_003709637.1|	-	2.9e-52	177.9	34.3	7.9e-42	143.5	24.0	3.0	2	1	1	3	3	3	3	Vacuole	effluxer	Atg22	like
MFS_1	PF07690.16	gi|297621500|ref|YP_003709637.1|	-	2.9e-25	88.9	84.3	2.4e-18	66.2	49.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Col_cuticle_N	PF01484.17	gi|297621501|ref|YP_003709638.1|	-	0.079	13.0	1.3	0.11	12.5	0.7	1.6	1	1	1	2	2	2	0	Nematode	cuticle	collagen	N-terminal	domain
Glycos_transf_2	PF00535.26	gi|297621502|ref|YP_003709639.1|	-	1.8e-17	63.7	0.0	2.7e-17	63.1	0.0	1.3	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|297621502|ref|YP_003709639.1|	-	3e-08	33.5	0.0	4.8e-08	32.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|297621502|ref|YP_003709639.1|	-	1.2e-07	31.9	0.0	1.9e-07	31.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
tRNA_synt_2f	PF02092.17	gi|297621503|ref|YP_003709640.1|	-	2.7e-182	607.4	0.0	3.5e-182	607.0	0.0	1.1	1	0	0	1	1	1	1	Glycyl-tRNA	synthetase	beta	subunit
tRNA-synt_2e	PF02091.15	gi|297621503|ref|YP_003709640.1|	-	3.2e-147	489.1	0.1	3.2e-147	489.1	0.1	1.8	2	0	0	2	2	2	1	Glycyl-tRNA	synthetase	alpha	subunit
DALR_1	PF05746.15	gi|297621503|ref|YP_003709640.1|	-	3.6e-07	30.4	3.1	3.6e-07	30.4	3.1	2.2	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
T3SS_needle_E	PF08988.10	gi|297621503|ref|YP_003709640.1|	-	6.8	6.9	6.5	9.1	6.5	1.4	2.8	2	0	0	2	2	2	0	Type	III	secretion	system,	cytoplasmic	E	component	of	needle
PK	PF00224.21	gi|297621504|ref|YP_003709641.1|	-	5.1e-130	433.4	0.2	6.3e-130	433.1	0.2	1.1	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.16	gi|297621504|ref|YP_003709641.1|	-	1.2e-28	99.7	0.0	2.3e-28	98.7	0.0	1.5	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.14	gi|297621504|ref|YP_003709641.1|	-	0.00041	19.5	0.0	0.00078	18.6	0.0	1.5	1	1	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
IMPDH	PF00478.25	gi|297621504|ref|YP_003709641.1|	-	0.032	13.2	0.0	0.13	11.3	0.0	1.8	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
HMA	PF00403.26	gi|297621505|ref|YP_003709642.1|	-	3.1e-05	24.3	0.0	5.3e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	Heavy-metal-associated	domain
PriC	PF07445.12	gi|297621506|ref|YP_003709643.1|	-	0.029	14.3	4.6	2	8.3	0.7	2.8	3	0	0	3	3	3	0	Primosomal	replication	protein	priC
AbiEi_3	PF11459.8	gi|297621506|ref|YP_003709643.1|	-	0.069	12.9	0.2	0.16	11.6	0.2	1.5	1	0	0	1	1	1	0	Transcriptional	regulator,	AbiEi	antitoxin,	Type	IV	TA	system
FGE-sulfatase	PF03781.16	gi|297621510|ref|YP_003709647.1|	-	4e-12	46.3	0.1	6e-11	42.4	0.0	2.1	1	1	1	2	2	2	1	Sulfatase-modifying	factor	enzyme	1
LysM	PF01476.20	gi|297621511|ref|YP_003709648.1|	-	0.00029	20.9	0.0	0.00073	19.6	0.0	1.8	1	0	0	1	1	1	1	LysM	domain
ATG16	PF08614.11	gi|297621511|ref|YP_003709648.1|	-	0.11	12.7	61.9	0.63	10.2	11.8	4.1	1	1	2	4	4	4	0	Autophagy	protein	16	(ATG16)
DUF4407	PF14362.6	gi|297621511|ref|YP_003709648.1|	-	1.1	8.6	34.8	2.1	7.6	9.4	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
PI_PP_I	PF18363.1	gi|297621511|ref|YP_003709648.1|	-	2.4	8.4	10.4	10	6.4	1.1	4.0	3	1	1	4	4	4	0	Phosphoinositide	phosphatase	insertion	domain
DUF3452	PF11934.8	gi|297621511|ref|YP_003709648.1|	-	4	7.0	7.5	0.7	9.4	1.3	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3452)
DUF3450	PF11932.8	gi|297621511|ref|YP_003709648.1|	-	6	6.1	54.1	0.17	11.1	4.8	4.5	1	1	3	5	5	5	0	Protein	of	unknown	function	(DUF3450)
UvrA_inter	PF17760.1	gi|297621512|ref|YP_003709649.1|	-	4.8e-58	193.9	7.8	3e-33	114.2	0.1	3.6	3	0	0	3	3	3	2	UvrA	interaction	domain
ABC_tran	PF00005.27	gi|297621512|ref|YP_003709649.1|	-	2e-41	141.7	3.7	3.3e-10	40.6	0.0	8.2	6	2	0	6	6	6	6	ABC	transporter
UvrA_DNA-bind	PF17755.1	gi|297621512|ref|YP_003709649.1|	-	5.7e-26	91.0	0.6	7.4e-19	68.1	0.0	4.2	4	0	0	4	4	4	2	UvrA	DNA-binding	domain
SMC_N	PF02463.19	gi|297621512|ref|YP_003709649.1|	-	1.8e-16	60.2	0.0	0.022	14.2	0.0	7.3	5	2	0	5	5	5	4	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|297621512|ref|YP_003709649.1|	-	5.7e-15	54.8	2.4	0.032	14.0	0.1	4.6	4	0	0	4	4	4	4	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|297621512|ref|YP_003709649.1|	-	5.8e-15	56.1	0.1	0.08	13.3	0.0	5.0	4	0	0	4	4	4	4	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|297621512|ref|YP_003709649.1|	-	8.3e-12	45.3	3.5	0.024	14.5	0.1	4.6	4	0	0	4	4	4	4	RsgA	GTPase
AAA_22	PF13401.6	gi|297621512|ref|YP_003709649.1|	-	2.8e-10	40.6	0.1	0.22	11.8	0.0	5.4	4	0	0	4	4	4	2	AAA	domain
AAA_15	PF13175.6	gi|297621512|ref|YP_003709649.1|	-	2.6e-08	34.0	14.0	0.2	11.3	0.1	7.2	7	0	0	7	7	7	2	AAA	ATPase	domain
AAA_33	PF13671.6	gi|297621512|ref|YP_003709649.1|	-	4.4e-08	33.4	0.2	0.95	9.6	0.1	4.9	4	0	0	4	4	4	1	AAA	domain
DnaJ_CXXCXGXG	PF00684.19	gi|297621512|ref|YP_003709649.1|	-	8.7e-08	32.4	12.4	0.18	12.2	0.5	6.3	6	0	0	6	6	6	2	DnaJ	central	domain
NACHT	PF05729.12	gi|297621512|ref|YP_003709649.1|	-	2.3e-07	30.9	0.1	0.02	14.8	0.0	4.7	4	0	0	4	4	4	1	NACHT	domain
Viral_helicase1	PF01443.18	gi|297621512|ref|YP_003709649.1|	-	3.7e-07	30.1	0.2	0.093	12.5	0.0	3.9	3	0	0	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
AAA_23	PF13476.6	gi|297621512|ref|YP_003709649.1|	-	6e-07	30.2	2.2	3.8	8.0	0.0	4.9	4	0	0	4	4	4	1	AAA	domain
AAA_25	PF13481.6	gi|297621512|ref|YP_003709649.1|	-	1.3e-06	28.1	1.2	0.52	9.8	0.0	5.2	6	0	0	6	6	5	1	AAA	domain
AAA_24	PF13479.6	gi|297621512|ref|YP_003709649.1|	-	1.2e-05	25.2	1.7	3.7	7.2	0.0	5.2	5	0	0	5	5	5	1	AAA	domain
AAA_18	PF13238.6	gi|297621512|ref|YP_003709649.1|	-	1.3e-05	25.7	3.8	3	8.4	0.0	5.1	4	0	0	4	4	4	1	AAA	domain
AAA_14	PF13173.6	gi|297621512|ref|YP_003709649.1|	-	2.3e-05	24.5	0.0	5.1	7.2	0.0	5.8	6	0	0	6	6	6	0	AAA	domain
APS_kinase	PF01583.20	gi|297621512|ref|YP_003709649.1|	-	3.6e-05	23.7	1.8	11	5.9	0.1	4.5	4	0	0	4	4	4	0	Adenylylsulphate	kinase
cobW	PF02492.19	gi|297621512|ref|YP_003709649.1|	-	0.00014	21.5	3.1	0.7	9.5	0.2	4.3	4	0	0	4	4	4	1	CobW/HypB/UreG,	nucleotide-binding	domain
RNA_helicase	PF00910.22	gi|297621512|ref|YP_003709649.1|	-	0.00041	20.7	0.5	37	4.8	0.0	4.5	4	0	0	4	4	4	0	RNA	helicase
AAA_30	PF13604.6	gi|297621512|ref|YP_003709649.1|	-	0.00051	19.8	0.3	1.8	8.3	0.0	4.5	4	0	0	4	4	4	1	AAA	domain
IstB_IS21	PF01695.17	gi|297621512|ref|YP_003709649.1|	-	0.0027	17.5	1.0	31	4.2	0.0	5.3	5	0	0	5	5	5	0	IstB-like	ATP	binding	protein
AAA_21	PF13304.6	gi|297621512|ref|YP_003709649.1|	-	0.0037	17.1	26.8	0.28	10.9	0.0	7.2	8	0	0	8	8	7	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
T2SSE	PF00437.20	gi|297621512|ref|YP_003709649.1|	-	0.0037	16.3	1.4	14	4.6	0.0	4.2	4	0	0	4	4	4	0	Type	II/IV	secretion	system	protein
NTPase_1	PF03266.15	gi|297621512|ref|YP_003709649.1|	-	0.0053	16.7	2.4	0.19	11.6	0.1	3.5	3	0	0	3	3	3	1	NTPase
MeaB	PF03308.16	gi|297621512|ref|YP_003709649.1|	-	0.0066	15.5	0.6	1.1	8.1	0.0	3.1	3	0	0	3	3	3	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
DUF2075	PF09848.9	gi|297621512|ref|YP_003709649.1|	-	0.0069	15.7	1.1	14	4.8	0.0	4.4	5	0	0	5	5	4	0	Uncharacterized	conserved	protein	(DUF2075)
MobB	PF03205.14	gi|297621512|ref|YP_003709649.1|	-	0.0098	15.8	0.2	0.99	9.3	0.0	3.3	3	0	0	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATPase	PF06745.13	gi|297621512|ref|YP_003709649.1|	-	0.012	15.0	0.8	28	4.0	0.0	4.2	4	0	0	4	4	4	0	KaiC
ATPase_2	PF01637.18	gi|297621512|ref|YP_003709649.1|	-	0.012	15.5	0.3	68	3.2	0.0	4.5	4	0	0	4	4	4	0	ATPase	domain	predominantly	from	Archaea
PhoH	PF02562.16	gi|297621512|ref|YP_003709649.1|	-	0.015	14.7	0.0	1.2	8.6	0.0	3.2	2	0	0	2	2	2	0	PhoH-like	protein
DAP3	PF10236.9	gi|297621512|ref|YP_003709649.1|	-	0.047	12.9	2.8	0.13	11.4	0.1	2.9	4	0	0	4	4	3	0	Mitochondrial	ribosomal	death-associated	protein	3
NB-ARC	PF00931.22	gi|297621512|ref|YP_003709649.1|	-	0.05	12.8	1.3	9.6	5.3	0.0	3.9	5	0	0	5	5	5	0	NB-ARC	domain
RNA12	PF10443.9	gi|297621512|ref|YP_003709649.1|	-	0.056	12.2	0.3	8	5.1	0.0	3.4	4	0	0	4	4	4	0	RNA12	protein
AAA_28	PF13521.6	gi|297621512|ref|YP_003709649.1|	-	0.063	13.5	1.5	85	3.3	0.1	4.5	4	0	0	4	4	4	0	AAA	domain
Roc	PF08477.13	gi|297621512|ref|YP_003709649.1|	-	0.068	13.4	0.2	49	4.2	0.0	4.1	4	0	0	4	4	4	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
PPS_PS	PF02006.16	gi|297621512|ref|YP_003709649.1|	-	0.071	12.7	0.5	4.9	6.7	0.0	3.6	4	0	0	4	4	4	0	Phosphopantothenate/pantothenate	synthetase
DUF815	PF05673.13	gi|297621512|ref|YP_003709649.1|	-	0.083	12.0	0.3	18	4.4	0.0	3.6	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF815)
PRK	PF00485.18	gi|297621512|ref|YP_003709649.1|	-	0.11	12.3	3.9	5.1	6.8	0.0	4.0	4	0	0	4	4	4	0	Phosphoribulokinase	/	Uridine	kinase	family
DUF463	PF04317.12	gi|297621512|ref|YP_003709649.1|	-	0.12	11.3	0.1	0.52	9.2	0.0	1.9	2	0	0	2	2	2	0	YcjX-like	family,	DUF463
MMR_HSR1	PF01926.23	gi|297621512|ref|YP_003709649.1|	-	0.22	11.6	2.9	39	4.4	0.0	4.3	4	0	0	4	4	4	0	50S	ribosome-binding	GTPase
CPT	PF07931.12	gi|297621512|ref|YP_003709649.1|	-	3.1	7.6	5.8	57	3.5	0.0	4.2	5	0	0	5	5	5	0	Chloramphenicol	phosphotransferase-like	protein
DUF1561	PF07598.11	gi|297621513|ref|YP_003709650.1|	-	0.031	12.5	0.0	0.041	12.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1561)
GARS_A	PF01071.19	gi|297621513|ref|YP_003709650.1|	-	0.07	12.9	0.0	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
PEP-utilisers_N	PF05524.13	gi|297621514|ref|YP_003709651.1|	-	0.036	14.2	0.1	0.14	12.3	0.0	2.0	2	0	0	2	2	2	0	PEP-utilising	enzyme,	N-terminal
RRM_3	PF08777.11	gi|297621514|ref|YP_003709651.1|	-	0.097	12.7	1.7	0.26	11.3	0.1	2.4	2	0	0	2	2	2	0	RNA	binding	motif
Tom37_C	PF11801.8	gi|297621514|ref|YP_003709651.1|	-	0.13	12.2	4.6	0.92	9.5	0.1	2.9	2	1	0	2	2	2	0	Tom37	C-terminal	domain
Ago_N_1	PF18351.1	gi|297621514|ref|YP_003709651.1|	-	0.39	11.2	3.1	0.51	10.8	0.8	2.4	2	1	0	2	2	2	0	Fungal	Argonaute	N-terminal	domain
DUF2115	PF09888.9	gi|297621514|ref|YP_003709651.1|	-	1.4	9.4	5.2	0.69	10.4	0.2	2.4	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Herpes_teg_N	PF04843.12	gi|297621515|ref|YP_003709652.1|	-	0.00013	21.6	0.0	0.00088	19.0	0.0	2.1	1	1	0	1	1	1	1	Herpesvirus	tegument	protein,	N-terminal	conserved	region
Oleosin	PF01277.17	gi|297621515|ref|YP_003709652.1|	-	0.065	13.0	0.0	0.17	11.6	0.0	1.6	1	0	0	1	1	1	0	Oleosin
FGGY_N	PF00370.21	gi|297621516|ref|YP_003709653.1|	-	5.9e-73	245.4	1.2	8.8e-73	244.9	1.2	1.3	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.16	gi|297621516|ref|YP_003709653.1|	-	8.8e-45	152.9	0.1	1.5e-44	152.1	0.1	1.4	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
DUF3361	PF11841.8	gi|297621517|ref|YP_003709654.1|	-	0.088	12.7	0.5	0.14	12.1	0.5	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3361)
Kdo_hydroxy	PF11004.8	gi|297621518|ref|YP_003709655.1|	-	4.9e-119	396.7	0.1	5.5e-119	396.5	0.1	1.0	1	0	0	1	1	1	1	3-deoxy-D-manno-oct-2-ulosonic	acid	(Kdo)	hydroxylase
Abhydrolase_1	PF00561.20	gi|297621519|ref|YP_003709656.1|	-	3.5e-23	82.6	0.0	7.2e-17	61.9	0.0	2.0	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Abhydrolase_6	PF12697.7	gi|297621519|ref|YP_003709656.1|	-	7.7e-18	65.9	0.0	9.4e-18	65.6	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.8	gi|297621519|ref|YP_003709656.1|	-	1.2e-15	57.4	0.0	1.6e-12	47.2	0.0	2.0	2	0	0	2	2	2	2	Serine	aminopeptidase,	S33
BAAT_C	PF08840.11	gi|297621519|ref|YP_003709656.1|	-	4.3e-05	23.5	0.0	5.7e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_4	PF08386.10	gi|297621519|ref|YP_003709656.1|	-	0.00018	21.6	0.0	0.00032	20.8	0.0	1.4	1	0	0	1	1	1	1	TAP-like	protein
Esterase	PF00756.20	gi|297621519|ref|YP_003709656.1|	-	0.0022	17.7	0.0	0.0026	17.4	0.0	1.3	1	0	0	1	1	1	1	Putative	esterase
DUF1057	PF06342.12	gi|297621519|ref|YP_003709656.1|	-	0.0028	16.8	0.0	0.003	16.6	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
Ndr	PF03096.14	gi|297621519|ref|YP_003709656.1|	-	0.011	14.4	0.0	0.058	12.1	0.0	1.9	1	1	0	1	1	1	0	Ndr	family
PGAP1	PF07819.13	gi|297621519|ref|YP_003709656.1|	-	0.02	14.6	0.0	0.026	14.2	0.0	1.2	1	0	0	1	1	1	0	PGAP1-like	protein
Chlorophyllase	PF07224.11	gi|297621519|ref|YP_003709656.1|	-	0.021	13.9	0.0	0.03	13.3	0.0	1.2	1	0	0	1	1	1	0	Chlorophyllase
Abhydrolase_5	PF12695.7	gi|297621519|ref|YP_003709656.1|	-	0.026	14.3	0.0	0.043	13.6	0.0	1.3	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
Tannase	PF07519.11	gi|297621519|ref|YP_003709656.1|	-	0.027	13.4	0.0	0.042	12.8	0.0	1.2	1	0	0	1	1	1	0	Tannase	and	feruloyl	esterase
FSH1	PF03959.13	gi|297621519|ref|YP_003709656.1|	-	0.056	13.1	0.2	1.3	8.7	0.0	2.4	2	1	0	2	2	2	0	Serine	hydrolase	(FSH1)
DUF915	PF06028.11	gi|297621519|ref|YP_003709656.1|	-	0.072	12.4	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
Thioesterase	PF00975.20	gi|297621519|ref|YP_003709656.1|	-	0.085	12.9	0.0	0.14	12.2	0.0	1.4	1	0	0	1	1	1	0	Thioesterase	domain
DLH	PF01738.18	gi|297621519|ref|YP_003709656.1|	-	0.19	11.2	0.0	2.8	7.5	0.0	2.0	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
DUF676	PF05057.14	gi|297621519|ref|YP_003709656.1|	-	0.21	11.1	0.0	0.33	10.4	0.0	1.3	1	0	0	1	1	1	0	Putative	serine	esterase	(DUF676)
Mur_ligase_M	PF08245.12	gi|297621520|ref|YP_003709657.1|	-	4.9e-33	114.8	0.0	7.6e-33	114.1	0.0	1.3	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.21	gi|297621520|ref|YP_003709657.1|	-	4.7e-07	30.0	0.0	2.2e-06	27.8	0.0	2.1	2	0	0	2	2	2	1	Mur	ligase	family,	glutamate	ligase	domain
Dala_Dala_lig_C	PF07478.13	gi|297621521|ref|YP_003709658.1|	-	2.9e-35	121.7	0.0	6e-35	120.6	0.0	1.5	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
Dala_Dala_lig_N	PF01820.21	gi|297621521|ref|YP_003709658.1|	-	8.1e-24	84.1	0.0	1.4e-23	83.3	0.0	1.4	1	0	0	1	1	1	1	D-ala	D-ala	ligase	N-terminus
CPSase_L_D2	PF02786.17	gi|297621521|ref|YP_003709658.1|	-	0.00012	21.7	0.0	0.14	11.7	0.0	2.2	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_4	PF13535.6	gi|297621521|ref|YP_003709658.1|	-	0.14	11.8	0.0	0.21	11.2	0.0	1.3	1	0	0	1	1	1	0	ATP-grasp	domain
EPSP_synthase	PF00275.20	gi|297621523|ref|YP_003709660.1|	-	4.4e-106	355.1	0.0	4.9e-106	354.9	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
SKI	PF01202.22	gi|297621524|ref|YP_003709661.1|	-	6.9e-42	143.3	0.0	7.9e-42	143.1	0.0	1.0	1	0	0	1	1	1	1	Shikimate	kinase
AAA	PF00004.29	gi|297621524|ref|YP_003709661.1|	-	0.00012	22.5	0.0	0.00027	21.3	0.0	1.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|297621524|ref|YP_003709661.1|	-	0.00031	21.3	0.0	0.0011	19.6	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|297621524|ref|YP_003709661.1|	-	0.00052	20.4	0.0	0.00066	20.1	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_33	PF13671.6	gi|297621524|ref|YP_003709661.1|	-	0.002	18.3	0.0	0.0024	18.0	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|297621524|ref|YP_003709661.1|	-	0.0031	17.3	0.0	0.0044	16.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Cytidylate_kin2	PF13189.6	gi|297621524|ref|YP_003709661.1|	-	0.0042	17.2	0.0	0.0063	16.7	0.0	1.4	1	0	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_14	PF13173.6	gi|297621524|ref|YP_003709661.1|	-	0.0059	16.6	0.1	0.012	15.6	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|297621524|ref|YP_003709661.1|	-	0.006	16.9	0.0	0.0098	16.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|297621524|ref|YP_003709661.1|	-	0.014	15.6	0.0	0.021	15.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.6	gi|297621524|ref|YP_003709661.1|	-	0.016	15.6	0.0	0.025	15.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.9	gi|297621524|ref|YP_003709661.1|	-	0.021	14.6	0.0	0.036	13.8	0.0	1.4	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
ABC_tran	PF00005.27	gi|297621524|ref|YP_003709661.1|	-	0.037	14.5	0.0	0.059	13.9	0.0	1.3	1	0	0	1	1	1	0	ABC	transporter
NACHT	PF05729.12	gi|297621524|ref|YP_003709661.1|	-	0.039	13.9	0.0	0.086	12.8	0.0	1.6	2	0	0	2	2	2	0	NACHT	domain
Roc	PF08477.13	gi|297621524|ref|YP_003709661.1|	-	0.052	13.8	0.0	0.08	13.2	0.0	1.4	1	0	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
TFIIA_gamma_N	PF02268.16	gi|297621524|ref|YP_003709661.1|	-	0.061	13.3	0.3	0.77	9.8	0.0	2.2	2	0	0	2	2	2	0	Transcription	initiation	factor	IIA,	gamma	subunit,	helical	domain
AAA_5	PF07728.14	gi|297621524|ref|YP_003709661.1|	-	0.089	12.8	0.1	0.21	11.6	0.1	1.6	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
SRP54	PF00448.22	gi|297621524|ref|YP_003709661.1|	-	0.09	12.4	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
RsgA_GTPase	PF03193.16	gi|297621524|ref|YP_003709661.1|	-	0.1	12.5	0.0	0.16	11.9	0.0	1.3	1	0	0	1	1	1	0	RsgA	GTPase
MMR_HSR1	PF01926.23	gi|297621524|ref|YP_003709661.1|	-	0.11	12.5	0.0	0.2	11.7	0.0	1.4	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
DUF815	PF05673.13	gi|297621524|ref|YP_003709661.1|	-	0.13	11.4	0.0	0.17	11.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
TsaE	PF02367.17	gi|297621524|ref|YP_003709661.1|	-	0.19	11.8	0.0	0.27	11.2	0.0	1.3	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
RNA_helicase	PF00910.22	gi|297621524|ref|YP_003709661.1|	-	0.19	12.2	0.0	0.31	11.5	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
DHQ_synthase	PF01761.20	gi|297621525|ref|YP_003709662.1|	-	1.1e-99	332.8	0.0	1.4e-99	332.6	0.0	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase
Fe-ADH_2	PF13685.6	gi|297621525|ref|YP_003709662.1|	-	3.4e-10	40.1	0.0	5.8e-09	36.0	0.0	2.2	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.19	gi|297621525|ref|YP_003709662.1|	-	0.0057	15.5	0.0	0.036	12.9	0.0	1.9	2	0	0	2	2	2	1	Iron-containing	alcohol	dehydrogenase
DHquinase_I	PF01487.15	gi|297621526|ref|YP_003709663.1|	-	1.2e-38	133.6	0.0	3.9e-38	132.0	0.0	1.9	1	1	0	1	1	1	1	Type	I	3-dehydroquinase
Shikimate_dh_N	PF08501.11	gi|297621526|ref|YP_003709663.1|	-	5.7e-27	93.8	0.0	1.5e-26	92.5	0.0	1.8	1	0	0	1	1	1	1	Shikimate	dehydrogenase	substrate	binding	domain
SDH_C	PF18317.1	gi|297621526|ref|YP_003709663.1|	-	3.3e-05	23.6	0.2	3.3e-05	23.6	0.2	2.3	3	0	0	3	3	3	1	Shikimate	5'-dehydrogenase	C-terminal	domain
Sacchrp_dh_NADP	PF03435.18	gi|297621526|ref|YP_003709663.1|	-	4.6e-05	23.7	0.0	0.13	12.5	0.0	2.9	3	0	0	3	3	3	2	Saccharopine	dehydrogenase	NADP	binding	domain
THF_DHG_CYH_C	PF02882.19	gi|297621526|ref|YP_003709663.1|	-	0.00032	20.1	0.0	0.00076	18.8	0.0	1.6	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
F420_oxidored	PF03807.17	gi|297621526|ref|YP_003709663.1|	-	0.0049	17.4	0.1	0.018	15.6	0.0	2.0	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
P3A	PF08727.11	gi|297621526|ref|YP_003709663.1|	-	0.0087	15.4	0.1	0.027	13.8	0.1	1.8	2	0	0	2	2	2	1	Poliovirus	3A	protein	like
Shikimate_DH	PF01488.20	gi|297621526|ref|YP_003709663.1|	-	0.027	14.5	0.0	0.071	13.2	0.0	1.7	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
ApbA	PF02558.16	gi|297621526|ref|YP_003709663.1|	-	0.13	11.9	0.0	0.24	11.0	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
DUF192	PF02643.15	gi|297621527|ref|YP_003709664.1|	-	3.1e-38	129.8	0.0	4.3e-38	129.4	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1430
SLATT_6	PF18169.1	gi|297621528|ref|YP_003709665.1|	-	0.049	13.2	0.1	0.076	12.6	0.1	1.3	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	6
Saf_2TM	PF18303.1	gi|297621528|ref|YP_003709665.1|	-	0.071	12.7	1.4	1.3	8.6	1.8	2.0	2	0	0	2	2	2	0	SAVED-fused	2TM	effector	domain
Pkinase	PF00069.25	gi|297621530|ref|YP_003709667.1|	-	3.8e-43	147.7	0.0	6.2e-43	147.1	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|297621530|ref|YP_003709667.1|	-	1.5e-26	93.2	0.0	2.5e-26	92.5	0.0	1.4	1	0	0	1	1	1	1	Protein	tyrosine	kinase
APH	PF01636.23	gi|297621530|ref|YP_003709667.1|	-	9.7e-05	22.4	0.0	0.0013	18.7	0.0	2.5	2	1	0	3	3	3	1	Phosphotransferase	enzyme	family
Pkinase_fungal	PF17667.1	gi|297621530|ref|YP_003709667.1|	-	0.00051	18.9	0.0	0.00083	18.2	0.0	1.2	1	0	0	1	1	1	1	Fungal	protein	kinase
Kinase-like	PF14531.6	gi|297621530|ref|YP_003709667.1|	-	0.021	14.2	0.0	0.042	13.2	0.0	1.4	1	0	0	1	1	1	0	Kinase-like
TPR_19	PF14559.6	gi|297621530|ref|YP_003709667.1|	-	0.13	12.8	0.1	1.8	9.1	0.1	2.8	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Glyco_transf_8	PF01501.20	gi|297621531|ref|YP_003709668.1|	-	7.7e-05	22.4	0.0	0.00014	21.6	0.0	1.4	2	0	0	2	2	2	1	Glycosyl	transferase	family	8
DUF4487	PF14868.6	gi|297621532|ref|YP_003709669.1|	-	0.024	13.5	0.1	0.033	13.0	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4487)
DUF2721	PF11026.8	gi|297621532|ref|YP_003709669.1|	-	0.047	13.6	1.7	0.14	12.1	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2721)
DUF3413	PF11893.8	gi|297621532|ref|YP_003709669.1|	-	0.061	12.5	0.2	0.12	11.5	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3413)
DUF5348	PF17295.2	gi|297621533|ref|YP_003709670.1|	-	0.00021	21.1	0.2	0.0006	19.7	0.2	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5348)
GGDEF_2	PF17853.1	gi|297621533|ref|YP_003709670.1|	-	0.15	12.3	0.2	1.6	9.0	0.0	2.5	3	0	0	3	3	3	0	GGDEF-like	domain
tRNA-synt_1	PF00133.22	gi|297621535|ref|YP_003709672.1|	-	1.3e-187	624.8	6.0	1.9e-175	584.6	3.5	3.8	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|297621535|ref|YP_003709672.1|	-	8.9e-39	132.9	0.3	1.8e-38	131.9	0.3	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|297621535|ref|YP_003709672.1|	-	1.9e-24	86.2	1.6	1.6e-08	33.7	0.0	4.2	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
Val_tRNA-synt_C	PF10458.9	gi|297621535|ref|YP_003709672.1|	-	4.9e-13	49.2	13.3	2.9e-12	46.7	12.9	2.4	2	0	0	2	2	2	1	Valyl	tRNA	synthetase	tRNA	binding	arm
tRNA-synt_1_2	PF13603.6	gi|297621535|ref|YP_003709672.1|	-	1.3e-09	37.9	0.1	3.6e-06	26.6	0.1	2.8	1	1	1	2	2	2	2	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.19	gi|297621535|ref|YP_003709672.1|	-	0.00034	20.1	0.0	0.16	11.3	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
ABC_tran_CTD	PF16326.5	gi|297621535|ref|YP_003709672.1|	-	0.023	14.9	10.1	0.083	13.1	10.1	2.0	1	0	0	1	1	1	0	ABC	transporter	C-terminal	domain
tRNA-synt_1f	PF01921.18	gi|297621535|ref|YP_003709672.1|	-	0.047	12.6	0.0	0.09	11.7	0.0	1.4	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(K)
DUF641	PF04859.12	gi|297621535|ref|YP_003709672.1|	-	0.27	11.6	4.7	2	8.7	2.5	2.9	3	0	0	3	3	3	0	Plant	protein	of	unknown	function	(DUF641)
KxDL	PF10241.9	gi|297621535|ref|YP_003709672.1|	-	6.1	7.2	7.7	3.1	8.1	5.3	1.7	2	0	0	2	2	2	0	Uncharacterized	conserved	protein
Legionella_OMP	PF05150.12	gi|297621536|ref|YP_003709673.1|	-	6.2e-33	113.9	0.0	7.8e-33	113.6	0.0	1.0	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
Na_Ala_symp	PF01235.17	gi|297621537|ref|YP_003709674.1|	-	9.4e-128	426.8	28.0	1.2e-127	426.5	28.0	1.0	1	0	0	1	1	1	1	Sodium:alanine	symporter	family
Prominin	PF05478.11	gi|297621537|ref|YP_003709674.1|	-	0.39	8.6	2.7	0.7	7.8	2.7	1.3	1	0	0	1	1	1	0	Prominin
Na_Ala_symp	PF01235.17	gi|297621538|ref|YP_003709675.1|	-	4.8e-134	447.6	34.2	6e-134	447.3	34.2	1.0	1	0	0	1	1	1	1	Sodium:alanine	symporter	family
PhaG_MnhG_YufB	PF03334.14	gi|297621539|ref|YP_003709676.1|	-	1.1e-24	86.5	11.8	1.3e-24	86.2	11.8	1.0	1	0	0	1	1	1	1	Na+/H+	antiporter	subunit
MASE5	PF17178.4	gi|297621539|ref|YP_003709676.1|	-	0.077	12.8	5.6	0.092	12.6	5.6	1.1	1	0	0	1	1	1	0	Membrane-associated	sensor
MrpF_PhaF	PF04066.13	gi|297621540|ref|YP_003709677.1|	-	8.7e-16	58.1	4.6	8.7e-16	58.1	4.6	1.6	2	0	0	2	2	2	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
MNHE	PF01899.16	gi|297621541|ref|YP_003709678.1|	-	4.1e-29	101.2	0.1	4.3e-29	101.1	0.1	1.0	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
Proton_antipo_M	PF00361.20	gi|297621542|ref|YP_003709679.1|	-	2.1e-56	191.3	26.6	2.1e-56	191.3	26.6	2.4	3	0	0	3	3	3	1	Proton-conducting	membrane	transporter
Proton_antipo_N	PF00662.20	gi|297621542|ref|YP_003709679.1|	-	7.8e-05	22.7	2.6	0.00026	21.0	0.0	3.1	3	0	0	3	3	3	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q2	PF00420.24	gi|297621543|ref|YP_003709680.1|	-	7.4e-27	93.0	2.4	9.1e-27	92.7	2.4	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
Ost4	PF10215.9	gi|297621543|ref|YP_003709680.1|	-	0.0047	16.7	1.1	0.0047	16.7	1.1	2.5	3	0	0	3	3	3	1	Oligosaccaryltransferase
TauE	PF01925.19	gi|297621543|ref|YP_003709680.1|	-	0.045	13.4	10.1	0.086	12.5	10.1	1.5	1	1	0	1	1	1	0	Sulfite	exporter	TauE/SafE
Proton_antipo_M	PF00361.20	gi|297621544|ref|YP_003709681.1|	-	2e-72	243.8	18.9	2e-72	243.8	18.9	2.9	2	0	0	2	2	2	1	Proton-conducting	membrane	transporter
MnhB	PF04039.13	gi|297621544|ref|YP_003709681.1|	-	1e-28	100.1	11.5	1e-28	100.1	11.5	6.8	4	3	2	7	7	7	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
DUF4040	PF13244.6	gi|297621544|ref|YP_003709681.1|	-	2.4e-10	40.4	11.0	2.4e-10	40.4	11.0	5.4	5	0	0	5	5	5	2	Domain	of	unknown	function	(DUF4040)
Proton_antipo_N	PF00662.20	gi|297621544|ref|YP_003709681.1|	-	2.1e-05	24.5	0.5	2.1e-05	24.5	0.5	3.2	3	0	0	3	3	3	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Pox_I1	PF03289.13	gi|297621544|ref|YP_003709681.1|	-	0.037	13.2	0.0	0.055	12.6	0.0	1.2	1	0	0	1	1	1	0	Poxvirus	protein	I1
Glyco_hydro_20b	PF02838.15	gi|297621545|ref|YP_003709682.1|	-	0.058	14.2	0.0	0.098	13.4	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	20,	domain	2
DAHP_synth_1	PF00793.20	gi|297621546|ref|YP_003709683.1|	-	4.9e-78	261.8	0.0	6.1e-78	261.5	0.0	1.0	1	0	0	1	1	1	1	DAHP	synthetase	I	family
DUF2749	PF10907.8	gi|297621548|ref|YP_003709685.1|	-	0.079	13.1	0.7	0.5	10.6	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2749)
QueC	PF06508.13	gi|297621549|ref|YP_003709686.1|	-	3.2e-54	183.6	0.1	3.6e-54	183.5	0.1	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
NAD_synthase	PF02540.17	gi|297621549|ref|YP_003709686.1|	-	7.3e-05	22.0	0.0	0.0015	17.7	0.0	2.0	2	0	0	2	2	2	1	NAD	synthase
Asn_synthase	PF00733.21	gi|297621549|ref|YP_003709686.1|	-	0.00052	19.8	0.0	0.00079	19.2	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
Arginosuc_synth	PF00764.19	gi|297621549|ref|YP_003709686.1|	-	0.0031	16.9	0.0	0.005	16.2	0.0	1.5	1	1	0	1	1	1	1	Arginosuccinate	synthase
ATP_bind_3	PF01171.20	gi|297621549|ref|YP_003709686.1|	-	0.083	12.6	0.2	0.18	11.5	0.2	1.5	2	0	0	2	2	2	0	PP-loop	family
ABC_membrane	PF00664.23	gi|297621550|ref|YP_003709687.1|	-	4.9e-40	137.9	11.4	8.1e-40	137.2	11.4	1.3	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.27	gi|297621550|ref|YP_003709687.1|	-	1.4e-37	129.3	0.0	3.4e-37	128.0	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|297621550|ref|YP_003709687.1|	-	1.7e-09	37.4	0.6	7e-07	28.9	0.6	2.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.6	gi|297621550|ref|YP_003709687.1|	-	0.00058	20.3	0.0	0.0015	18.9	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
ABC_ATPase	PF09818.9	gi|297621550|ref|YP_003709687.1|	-	0.00068	18.5	0.0	0.009	14.9	0.0	2.3	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
AAA_23	PF13476.6	gi|297621550|ref|YP_003709687.1|	-	0.00093	19.8	2.5	0.0072	16.8	0.1	2.5	2	0	0	2	2	2	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|297621550|ref|YP_003709687.1|	-	0.00093	19.1	0.0	0.002	18.0	0.0	1.5	1	0	0	1	1	1	1	RsgA	GTPase
AAA_29	PF13555.6	gi|297621550|ref|YP_003709687.1|	-	0.0013	18.4	0.0	0.0036	17.0	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|297621550|ref|YP_003709687.1|	-	0.0037	17.5	0.3	0.025	14.8	0.1	2.4	2	1	0	2	2	1	1	AAA	domain
DEAD	PF00270.29	gi|297621550|ref|YP_003709687.1|	-	0.0078	16.0	0.0	0.029	14.2	0.0	1.9	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_30	PF13604.6	gi|297621550|ref|YP_003709687.1|	-	0.0086	15.8	0.0	0.019	14.7	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.23	gi|297621550|ref|YP_003709687.1|	-	0.017	15.2	0.0	0.11	12.6	0.0	2.3	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_21	PF13304.6	gi|297621550|ref|YP_003709687.1|	-	0.018	14.9	0.0	0.81	9.4	0.0	2.7	3	0	0	3	3	3	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
DUF87	PF01935.17	gi|297621550|ref|YP_003709687.1|	-	0.03	14.4	0.0	0.13	12.4	0.0	2.0	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
Mg_chelatase	PF01078.21	gi|297621550|ref|YP_003709687.1|	-	0.044	13.2	0.0	0.088	12.2	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
ATP-synt_I	PF03899.15	gi|297621550|ref|YP_003709687.1|	-	0.046	14.1	0.5	0.046	14.1	0.5	2.8	4	0	0	4	4	3	0	ATP	synthase	I	chain
AAA_7	PF12775.7	gi|297621550|ref|YP_003709687.1|	-	0.055	13.0	0.0	0.11	12.0	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
DUF2847	PF11009.8	gi|297621551|ref|YP_003709688.1|	-	2.1e-34	117.5	0.1	2.3e-34	117.4	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2847)
ACCA	PF03255.14	gi|297621552|ref|YP_003709689.1|	-	5.9e-56	188.3	0.0	9.2e-56	187.7	0.0	1.3	1	0	0	1	1	1	1	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
Carboxyl_trans	PF01039.22	gi|297621552|ref|YP_003709689.1|	-	3.9e-17	62.1	0.0	5.1e-17	61.7	0.0	1.1	1	0	0	1	1	1	1	Carboxyl	transferase	domain
PEX11	PF05648.14	gi|297621552|ref|YP_003709689.1|	-	0.17	11.3	0.1	0.96	8.9	0.0	2.0	2	0	0	2	2	2	0	Peroxisomal	biogenesis	factor	11	(PEX11)
YkuD	PF03734.14	gi|297621553|ref|YP_003709690.1|	-	2.4e-10	41.0	0.0	4.8e-10	40.0	0.0	1.5	1	0	0	1	1	1	1	L,D-transpeptidase	catalytic	domain
Bac_DNA_binding	PF00216.21	gi|297621554|ref|YP_003709691.1|	-	2.8e-26	91.5	0.2	3.3e-26	91.3	0.2	1.0	1	0	0	1	1	1	1	Bacterial	DNA-binding	protein
HU-HIG	PF18291.1	gi|297621554|ref|YP_003709691.1|	-	9.4e-13	48.3	0.0	1.3e-12	47.9	0.0	1.2	1	0	0	1	1	1	1	HU	domain	fused	to	wHTH,	Ig,	or	Glycine-rich	motif
HU-CCDC81_bac_2	PF18175.1	gi|297621554|ref|YP_003709691.1|	-	3.2e-05	23.7	0.0	5.6e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	CCDC81-like	prokaryotic	HU	domain	2
HU-CCDC81_euk_2	PF18289.1	gi|297621554|ref|YP_003709691.1|	-	5.9e-05	23.1	0.0	9.6e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	CCDC81	eukaryotic	HU	domain	2
HU-DNA_bdg	PF14848.6	gi|297621554|ref|YP_003709691.1|	-	0.0082	16.1	0.0	0.44	10.6	0.0	2.1	2	0	0	2	2	2	1	DNA-binding	domain
Mnd1	PF03962.15	gi|297621554|ref|YP_003709691.1|	-	0.11	12.8	0.1	0.18	12.1	0.1	1.4	1	0	0	1	1	1	0	Mnd1	HTH	domain
tRNA-synt_1b	PF00579.25	gi|297621555|ref|YP_003709692.1|	-	7.8e-81	271.6	0.0	1.1e-80	271.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
S4	PF01479.25	gi|297621555|ref|YP_003709692.1|	-	0.00011	21.8	0.0	0.00026	20.7	0.0	1.7	1	0	0	1	1	1	1	S4	domain
TyrRSs_C	PF16714.5	gi|297621555|ref|YP_003709692.1|	-	0.0015	18.3	0.3	0.036	13.9	0.3	2.3	1	1	0	1	1	1	1	Tyrosyl-tRNA	synthetase	C-terminal	domain
ATE_C	PF04377.15	gi|297621555|ref|YP_003709692.1|	-	0.079	13.6	0.0	0.23	12.1	0.0	1.7	1	0	0	1	1	1	0	Arginine-tRNA-protein	transferase,	C	terminus
Caprin-1_dimer	PF18293.1	gi|297621556|ref|YP_003709693.1|	-	0.025	15.1	0.4	5	7.6	0.1	2.1	2	0	0	2	2	2	0	Caprin-1	dimerization	domain
NIF3	PF01784.18	gi|297621557|ref|YP_003709694.1|	-	2.2e-47	161.8	0.0	2.6e-47	161.5	0.0	1.0	1	0	0	1	1	1	1	NIF3	(NGG1p	interacting	factor	3)
Rib_5-P_isom_A	PF06026.14	gi|297621558|ref|YP_003709695.1|	-	4e-57	192.6	0.0	4.9e-57	192.3	0.0	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.22	gi|297621558|ref|YP_003709695.1|	-	2.2e-06	27.7	0.7	1e-05	25.5	0.2	2.0	2	0	0	2	2	2	1	DeoR	C	terminal	sensor	domain
Sugar-bind	PF04198.13	gi|297621558|ref|YP_003709695.1|	-	0.006	15.8	0.1	0.011	14.9	0.1	1.4	1	1	0	1	1	1	1	Putative	sugar-binding	domain
DNase-RNase	PF02577.14	gi|297621559|ref|YP_003709696.1|	-	3.4e-30	104.3	0.0	4.2e-30	104.0	0.0	1.0	1	0	0	1	1	1	1	Bifunctional	nuclease
DUF2709	PF10915.8	gi|297621559|ref|YP_003709696.1|	-	0.038	13.2	0.0	0.042	13.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2709)
PTS-HPr	PF00381.19	gi|297621560|ref|YP_003709697.1|	-	2.3e-24	85.4	0.4	2.6e-24	85.3	0.4	1.1	1	0	0	1	1	1	1	PTS	HPr	component	phosphorylation	site
Peptidase_M3	PF01432.20	gi|297621562|ref|YP_003709699.1|	-	5.9e-76	256.6	4.9	8.4e-76	256.1	4.9	1.2	1	0	0	1	1	1	1	Peptidase	family	M3
Peptidase_M3_N	PF08439.10	gi|297621562|ref|YP_003709699.1|	-	1.6e-15	57.1	0.4	5.4e-15	55.4	0.4	2.0	1	0	0	1	1	1	1	Oligopeptidase	F
Cpn10	PF00166.21	gi|297621563|ref|YP_003709700.1|	-	4.2e-31	106.9	0.2	4.9e-31	106.6	0.2	1.1	1	0	0	1	1	1	1	Chaperonin	10	Kd	subunit
PhyH	PF05721.13	gi|297621563|ref|YP_003709700.1|	-	0.12	12.6	0.0	0.14	12.4	0.0	1.2	1	0	0	1	1	1	0	Phytanoyl-CoA	dioxygenase	(PhyH)
Cpn60_TCP1	PF00118.24	gi|297621564|ref|YP_003709701.1|	-	2.2e-95	320.1	21.6	4e-95	319.3	21.6	1.4	1	1	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
AEP1	PF17049.5	gi|297621564|ref|YP_003709701.1|	-	0.031	13.4	0.1	0.048	12.7	0.1	1.3	1	0	0	1	1	1	0	ATPase	expression	protein	1
Peptidase_C14	PF00656.22	gi|297621565|ref|YP_003709702.1|	-	6.4e-08	32.8	0.0	7.9e-08	32.5	0.0	1.1	1	0	0	1	1	1	1	Caspase	domain
AbiJ_NTD4	PF18863.1	gi|297621565|ref|YP_003709702.1|	-	0.091	13.2	0.0	0.13	12.7	0.0	1.5	1	1	0	1	1	1	0	AbiJ	N-terminal	domain	4
DUF4806	PF16064.5	gi|297621565|ref|YP_003709702.1|	-	0.14	12.5	0.0	0.55	10.6	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4806)
DUF3763	PF12592.8	gi|297621566|ref|YP_003709703.1|	-	0.067	13.3	0.1	0.2	11.8	0.1	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3763)
EP400_N	PF15790.5	gi|297621566|ref|YP_003709703.1|	-	0.15	10.9	0.0	0.17	10.7	0.0	1.1	1	0	0	1	1	1	0	E1A-binding	protein	p400,	N-terminal
HTH_31	PF13560.6	gi|297621567|ref|YP_003709704.1|	-	0.0058	16.9	0.0	0.0089	16.4	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
TPR_14	PF13428.6	gi|297621567|ref|YP_003709704.1|	-	0.025	15.4	0.7	0.052	14.4	0.5	1.7	1	1	0	1	1	1	0	Tetratricopeptide	repeat
HTH_26	PF13443.6	gi|297621567|ref|YP_003709704.1|	-	0.03	14.7	0.0	0.045	14.2	0.0	1.3	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
TPR_8	PF13181.6	gi|297621567|ref|YP_003709704.1|	-	0.075	13.3	0.1	0.21	11.9	0.1	1.8	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Gp49	PF05973.14	gi|297621568|ref|YP_003709705.1|	-	3.5e-06	27.1	0.0	4.9e-06	26.6	0.0	1.2	1	0	0	1	1	1	1	Phage	derived	protein	Gp49-like	(DUF891)
Histidinol_dh	PF00815.20	gi|297621570|ref|YP_003709707.1|	-	0.0012	17.9	0.3	0.002	17.2	0.3	1.2	1	0	0	1	1	1	1	Histidinol	dehydrogenase
BatD	PF13584.6	gi|297621571|ref|YP_003709708.1|	-	1e-09	37.7	0.6	1.2e-09	37.6	0.6	1.0	1	0	0	1	1	1	1	Oxygen	tolerance
TRAPPC10	PF12584.8	gi|297621571|ref|YP_003709708.1|	-	0.0026	17.4	0.0	0.0044	16.7	0.0	1.4	1	1	0	1	1	1	1	Trafficking	protein	particle	complex	subunit	10,	TRAPPC10
STT3_PglB_C	PF18527.1	gi|297621571|ref|YP_003709708.1|	-	0.022	14.8	0.6	0.063	13.4	0.3	1.8	1	1	1	2	2	2	0	STT3/PglB	C-terminal	beta-barrel	domain
SoxZ	PF08770.11	gi|297621571|ref|YP_003709708.1|	-	0.043	13.6	0.1	0.078	12.8	0.1	1.5	1	0	0	1	1	1	0	Sulphur	oxidation	protein	SoxZ
HIT	PF01230.23	gi|297621572|ref|YP_003709709.1|	-	1e-13	51.8	0.6	3e-13	50.3	0.1	1.9	2	0	0	2	2	2	1	HIT	domain
DcpS_C	PF11969.8	gi|297621572|ref|YP_003709709.1|	-	2.7e-05	24.6	2.9	0.00021	21.7	0.7	2.5	2	1	0	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.15	gi|297621572|ref|YP_003709709.1|	-	0.075	12.9	0.1	0.17	11.7	0.1	1.7	1	0	0	1	1	1	0	Protein	similar	to	CwfJ	C-terminus	1
MutS_V	PF00488.21	gi|297621573|ref|YP_003709710.1|	-	5.8e-86	287.3	0.1	1.7e-85	285.8	0.2	1.7	2	0	0	2	2	2	1	MutS	domain	V
MutS_III	PF05192.18	gi|297621573|ref|YP_003709710.1|	-	9.7e-39	133.6	3.4	1.8e-38	132.7	3.4	1.5	1	0	0	1	1	1	1	MutS	domain	III
MutS_I	PF01624.20	gi|297621573|ref|YP_003709710.1|	-	1e-38	132.0	0.1	5.3e-38	129.7	0.0	2.3	3	0	0	3	3	3	1	MutS	domain	I
MutS_IV	PF05190.18	gi|297621573|ref|YP_003709710.1|	-	1.1e-29	102.6	1.4	2.7e-29	101.3	1.4	1.7	1	0	0	1	1	1	1	MutS	family	domain	IV
MutS_II	PF05188.17	gi|297621573|ref|YP_003709710.1|	-	2.1e-21	76.6	0.0	5.9e-21	75.2	0.0	1.7	1	0	0	1	1	1	1	MutS	domain	II
AAA_23	PF13476.6	gi|297621573|ref|YP_003709710.1|	-	0.0053	17.3	5.6	0.32	11.5	0.0	2.8	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.6	gi|297621573|ref|YP_003709710.1|	-	0.0073	16.3	0.3	0.039	14.0	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
Rad17	PF03215.15	gi|297621573|ref|YP_003709710.1|	-	0.015	15.2	0.0	0.057	13.3	0.0	2.0	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_27	PF13514.6	gi|297621573|ref|YP_003709710.1|	-	0.035	13.7	0.0	0.093	12.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.6	gi|297621573|ref|YP_003709710.1|	-	0.14	11.9	0.0	0.35	10.6	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
CxxCxxCC	PF03692.15	gi|297621575|ref|YP_003709712.1|	-	4e-05	24.2	0.1	7.7e-05	23.3	0.1	1.4	1	1	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
Defensin_beta	PF00711.19	gi|297621575|ref|YP_003709712.1|	-	1	9.5	7.8	1.6	8.8	2.5	2.4	2	0	0	2	2	2	0	Beta	defensin
PriA_3primeBD	PF17764.1	gi|297621578|ref|YP_003709715.1|	-	9.3e-23	79.9	0.0	2.5e-22	78.6	0.0	1.8	1	0	0	1	1	1	1	3′	DNA-binding	domain	(3′BD)
ResIII	PF04851.15	gi|297621578|ref|YP_003709715.1|	-	9.1e-17	61.6	0.0	1.6e-16	60.8	0.0	1.4	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|297621578|ref|YP_003709715.1|	-	1.2e-16	61.0	0.0	2.8e-16	59.8	0.0	1.6	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|297621578|ref|YP_003709715.1|	-	1.1e-13	51.5	0.4	2.8e-08	34.1	0.0	3.8	4	0	0	4	4	4	2	Helicase	conserved	C-terminal	domain
PriA_C	PF18074.1	gi|297621578|ref|YP_003709715.1|	-	8.4e-12	45.8	0.0	4.5e-11	43.4	0.0	2.4	2	0	0	2	2	1	1	Primosomal	protein	N	C-terminal	domain
PriA_CRR	PF18319.1	gi|297621578|ref|YP_003709715.1|	-	0.00052	19.9	15.1	0.0013	18.7	15.1	1.7	1	0	0	1	1	1	1	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
PIF1	PF05970.14	gi|297621578|ref|YP_003709715.1|	-	0.0014	17.9	0.0	0.0024	17.1	0.0	1.3	1	0	0	1	1	1	1	PIF1-like	helicase
ATPase_2	PF01637.18	gi|297621578|ref|YP_003709715.1|	-	0.0019	18.2	0.1	0.0034	17.3	0.1	1.4	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_19	PF13245.6	gi|297621578|ref|YP_003709715.1|	-	0.0034	17.7	0.0	0.0081	16.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
DAP3	PF10236.9	gi|297621578|ref|YP_003709715.1|	-	0.011	15.0	0.0	0.019	14.1	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_30	PF13604.6	gi|297621578|ref|YP_003709715.1|	-	0.013	15.2	0.0	0.024	14.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|297621578|ref|YP_003709715.1|	-	0.026	14.9	0.0	0.052	13.9	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
TrwB_AAD_bind	PF10412.9	gi|297621578|ref|YP_003709715.1|	-	0.034	13.1	0.0	0.063	12.2	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Kinesin	PF00225.23	gi|297621578|ref|YP_003709715.1|	-	0.046	12.6	0.0	0.074	12.0	0.0	1.2	1	0	0	1	1	1	0	Kinesin	motor	domain
AAA_22	PF13401.6	gi|297621578|ref|YP_003709715.1|	-	0.066	13.5	0.0	0.46	10.8	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
tRNA-synt_2	PF00152.20	gi|297621580|ref|YP_003709717.1|	-	1.8e-77	260.5	0.2	2.3e-77	260.2	0.2	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|297621580|ref|YP_003709717.1|	-	5.2e-15	55.2	0.0	1.1e-14	54.2	0.0	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|297621580|ref|YP_003709717.1|	-	1.9e-08	34.1	0.1	1.3e-05	24.8	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
GCR1_C	PF12550.8	gi|297621580|ref|YP_003709717.1|	-	0.13	12.6	1.0	0.41	11.0	0.3	2.1	2	0	0	2	2	2	0	Transcriptional	activator	of	glycolytic	enzymes
RE_R_Pab1	PF09522.10	gi|297621583|ref|YP_003709720.1|	-	0.0041	17.2	0.2	0.0071	16.4	0.2	1.4	1	0	0	1	1	1	1	R.Pab1	restriction	endonuclease
Conotoxin	PF02950.17	gi|297621583|ref|YP_003709720.1|	-	0.18	12.9	0.0	0.36	11.9	0.0	1.5	1	0	0	1	1	1	0	Conotoxin
LPAM_1	PF08139.12	gi|297621583|ref|YP_003709720.1|	-	0.21	12.1	0.5	0.38	11.3	0.5	1.4	1	0	0	1	1	1	0	Prokaryotic	membrane	lipoprotein	lipid	attachment	site
RHS_repeat	PF05593.14	gi|297621584|ref|YP_003709721.1|	-	1.4e-44	150.0	59.5	5.1e-05	23.7	0.2	19.8	16	3	4	21	21	21	16	RHS	Repeat
OPT	PF03169.15	gi|297621587|ref|YP_003709724.1|	-	1.2e-42	146.3	48.3	2.7e-27	95.7	22.6	2.1	2	0	0	2	2	2	2	OPT	oligopeptide	transporter	protein
S_4TM	PF18159.1	gi|297621587|ref|YP_003709724.1|	-	0.12	11.7	2.5	0.27	10.5	0.1	2.7	2	0	0	2	2	2	0	SMODS-associating	4TM	effector	domain
DUF3262	PF11660.8	gi|297621587|ref|YP_003709724.1|	-	0.81	10.1	6.9	2.4	8.6	0.8	3.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3262)
Fer4_9	PF13187.6	gi|297621588|ref|YP_003709725.1|	-	5.8e-08	32.8	7.8	9e-08	32.2	7.8	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|297621588|ref|YP_003709725.1|	-	2.5e-07	31.2	10.0	4.3e-07	30.4	10.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|297621588|ref|YP_003709725.1|	-	2.7e-07	30.4	16.3	0.00046	20.2	4.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|297621588|ref|YP_003709725.1|	-	3.8e-07	29.6	14.5	5e-06	26.1	3.5	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|297621588|ref|YP_003709725.1|	-	1.1e-06	29.4	6.0	0.0006	20.7	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|297621588|ref|YP_003709725.1|	-	2.1e-06	27.7	4.7	0.00041	20.4	0.6	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|297621588|ref|YP_003709725.1|	-	1e-05	25.3	15.9	0.0024	17.9	2.5	2.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|297621588|ref|YP_003709725.1|	-	1.3e-05	25.7	2.2	0.0051	17.3	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|297621588|ref|YP_003709725.1|	-	1.4e-05	25.2	12.1	0.00034	20.9	1.4	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|297621588|ref|YP_003709725.1|	-	2.3e-05	24.4	14.6	0.00076	19.5	2.9	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|297621588|ref|YP_003709725.1|	-	3.3e-05	24.2	5.4	0.0002	21.7	0.4	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|297621588|ref|YP_003709725.1|	-	0.0012	18.6	6.9	0.15	11.9	0.8	2.2	2	0	0	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_3	PF12798.7	gi|297621588|ref|YP_003709725.1|	-	0.007	17.2	8.1	0.007	17.2	8.1	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_11	PF13247.6	gi|297621588|ref|YP_003709725.1|	-	0.063	13.4	3.8	0.4	10.8	0.2	2.2	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|297621588|ref|YP_003709725.1|	-	0.77	10.6	7.5	0.3	11.9	0.8	2.2	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|297621588|ref|YP_003709725.1|	-	1.7	8.9	9.9	22	5.3	10.0	2.1	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
tRNA-synt_1e	PF01406.19	gi|297621589|ref|YP_003709726.1|	-	3.7e-111	371.3	0.1	5.1e-111	370.8	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.11	gi|297621589|ref|YP_003709726.1|	-	2.1e-10	40.0	0.5	2.9e-05	23.0	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
DALR_2	PF09190.11	gi|297621589|ref|YP_003709726.1|	-	1.9e-07	31.4	0.1	5.3e-07	30.0	0.1	1.8	1	0	0	1	1	1	1	DALR	domain
tRNA-synt_1f	PF01921.18	gi|297621589|ref|YP_003709726.1|	-	9e-07	28.1	0.1	0.00073	18.6	0.0	2.5	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1c	PF00749.21	gi|297621589|ref|YP_003709726.1|	-	0.00019	20.5	0.0	0.00044	19.2	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1	PF00133.22	gi|297621589|ref|YP_003709726.1|	-	0.0028	16.0	0.0	0.014	13.6	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Band_7	PF01145.25	gi|297621589|ref|YP_003709726.1|	-	0.063	13.3	0.1	2.6	8.0	0.0	2.2	2	0	0	2	2	2	0	SPFH	domain	/	Band	7	family
AMP-binding	PF00501.28	gi|297621590|ref|YP_003709727.1|	-	6.9e-67	225.9	0.0	9.3e-67	225.5	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme
Acyltransferase	PF01553.21	gi|297621590|ref|YP_003709727.1|	-	7.2e-07	28.9	0.0	5.1e-06	26.1	0.0	2.1	2	0	0	2	2	2	1	Acyltransferase
PP-binding	PF00550.25	gi|297621590|ref|YP_003709727.1|	-	2.7e-06	27.6	0.3	6.5e-06	26.4	0.3	1.6	1	0	0	1	1	1	1	Phosphopantetheine	attachment	site
NUDIX	PF00293.28	gi|297621593|ref|YP_003709730.1|	-	2.1e-18	66.6	0.2	2.6e-18	66.3	0.2	1.0	1	0	0	1	1	1	1	NUDIX	domain
ketoacyl-synt	PF00109.26	gi|297621594|ref|YP_003709731.1|	-	3.4e-60	203.8	2.5	5.4e-60	203.1	0.7	1.9	2	0	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
Ketoacyl-synt_C	PF02801.22	gi|297621594|ref|YP_003709731.1|	-	5.1e-34	116.8	1.8	1.1e-33	115.7	1.8	1.6	1	0	0	1	1	1	1	Beta-ketoacyl	synthase,	C-terminal	domain
Thiolase_N	PF00108.23	gi|297621594|ref|YP_003709731.1|	-	8e-06	25.4	0.3	8e-06	25.4	0.3	2.1	3	0	0	3	3	3	1	Thiolase,	N-terminal	domain
KAsynt_C_assoc	PF16197.5	gi|297621594|ref|YP_003709731.1|	-	0.0056	17.1	0.0	0.021	15.2	0.0	2.0	2	0	0	2	2	2	1	Ketoacyl-synthetase	C-terminal	extension
RsfS	PF02410.15	gi|297621595|ref|YP_003709732.1|	-	3.6e-25	88.3	0.0	4.2e-25	88.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	silencing	factor	during	starvation
CTP_transf_like	PF01467.26	gi|297621596|ref|YP_003709733.1|	-	4.9e-24	85.2	0.0	6e-24	84.9	0.0	1.1	1	0	0	1	1	1	1	Cytidylyltransferase-like
HIGH_NTase1	PF05636.11	gi|297621596|ref|YP_003709733.1|	-	0.13	11.4	0.0	3.3	6.8	0.0	2.0	2	0	0	2	2	2	0	HIGH	Nucleotidyl	Transferase
GSIII_N	PF12437.8	gi|297621597|ref|YP_003709734.1|	-	6.1e-70	234.0	0.2	2.8e-69	231.9	0.0	2.0	2	0	0	2	2	2	1	Glutamine	synthetase	type	III	N	terminal
Gln-synt_C-ter	PF18318.1	gi|297621597|ref|YP_003709734.1|	-	2.9e-36	123.9	0.1	7.5e-36	122.6	0.1	1.7	1	0	0	1	1	1	1	Glutamine	synthetase	C-terminal	domain
Gln-synt_C	PF00120.24	gi|297621597|ref|YP_003709734.1|	-	1.8e-19	70.0	0.1	2.5e-18	66.2	0.0	2.4	3	0	0	3	3	3	1	Glutamine	synthetase,	catalytic	domain
Muted	PF14942.6	gi|297621597|ref|YP_003709734.1|	-	0.016	15.5	1.8	0.045	14.1	1.8	1.7	1	0	0	1	1	1	0	Organelle	biogenesis,	Muted-like	protein
DUF713	PF05218.14	gi|297621597|ref|YP_003709734.1|	-	0.021	14.5	0.8	0.051	13.3	0.8	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF713)
CAP_N	PF01213.19	gi|297621597|ref|YP_003709734.1|	-	2.2	7.7	5.5	2.6	7.4	3.1	2.1	1	1	1	2	2	2	0	Adenylate	cyclase	associated	(CAP)	N	terminal
HAD	PF12710.7	gi|297621598|ref|YP_003709735.1|	-	2.3e-12	47.7	0.0	2.7e-12	47.5	0.0	1.0	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|297621598|ref|YP_003709735.1|	-	0.00016	22.0	0.0	0.00019	21.8	0.0	1.1	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|297621598|ref|YP_003709735.1|	-	0.017	14.9	0.0	0.62	9.7	0.0	2.0	2	0	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
DUF1664	PF07889.12	gi|297621599|ref|YP_003709736.1|	-	0.056	13.5	27.6	0.19	11.8	4.2	5.6	5	1	1	6	6	6	0	Protein	of	unknown	function	(DUF1664)
Baculo_PEP_C	PF04513.12	gi|297621599|ref|YP_003709736.1|	-	0.11	12.6	5.5	5.3	7.1	0.0	3.7	4	0	0	4	4	4	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
VasL	PF12486.8	gi|297621599|ref|YP_003709736.1|	-	0.15	11.9	0.2	0.15	11.9	0.2	3.6	4	0	0	4	4	4	0	Type	VI	secretion	system,	EvfB,	or	VasL
NPV_P10	PF05531.12	gi|297621599|ref|YP_003709736.1|	-	3.9	8.0	17.7	35	4.9	0.1	5.9	5	2	2	7	7	6	0	Nucleopolyhedrovirus	P10	protein
DUF2252	PF10009.9	gi|297621599|ref|YP_003709736.1|	-	5.2	6.0	12.1	1.9	7.5	8.0	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2252)
DUF4263	PF14082.6	gi|297621599|ref|YP_003709736.1|	-	5.9	7.1	15.0	0.5	10.6	1.2	3.6	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4263)
IPPT	PF01715.17	gi|297621600|ref|YP_003709737.1|	-	5.8e-75	252.0	0.1	7.9e-75	251.6	0.1	1.2	1	0	0	1	1	1	1	IPP	transferase
IPT	PF01745.16	gi|297621600|ref|YP_003709737.1|	-	3.1e-10	39.8	0.1	1.7e-07	30.9	0.0	2.2	2	0	0	2	2	2	2	Isopentenyl	transferase
PPV_E1_C	PF00519.17	gi|297621600|ref|YP_003709737.1|	-	0.0002	20.4	0.0	0.0003	19.8	0.0	1.2	1	0	0	1	1	1	1	Papillomavirus	helicase
AAA_33	PF13671.6	gi|297621600|ref|YP_003709737.1|	-	0.00041	20.5	0.0	0.002	18.3	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.6	gi|297621600|ref|YP_003709737.1|	-	0.0029	18.1	0.0	0.077	13.5	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.12	gi|297621600|ref|YP_003709737.1|	-	0.0084	15.4	0.1	0.09	12.0	0.0	2.4	2	0	0	2	2	2	1	Zeta	toxin
AAA_25	PF13481.6	gi|297621600|ref|YP_003709737.1|	-	0.015	14.9	0.0	0.027	14.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|297621600|ref|YP_003709737.1|	-	0.017	15.6	0.0	0.055	13.9	0.0	1.9	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.22	gi|297621600|ref|YP_003709737.1|	-	0.02	15.3	0.0	0.044	14.2	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
TsaE	PF02367.17	gi|297621600|ref|YP_003709737.1|	-	0.029	14.3	0.0	0.062	13.3	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
T2SSE	PF00437.20	gi|297621600|ref|YP_003709737.1|	-	0.036	13.1	0.0	0.06	12.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Rad17	PF03215.15	gi|297621600|ref|YP_003709737.1|	-	0.043	13.7	0.0	0.085	12.8	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
PRK	PF00485.18	gi|297621600|ref|YP_003709737.1|	-	0.045	13.5	0.0	0.089	12.5	0.0	1.5	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
Cytidylate_kin	PF02224.18	gi|297621600|ref|YP_003709737.1|	-	0.054	13.2	0.0	0.13	12.0	0.0	1.7	2	0	0	2	2	2	0	Cytidylate	kinase
Hydin_ADK	PF17213.3	gi|297621600|ref|YP_003709737.1|	-	0.058	13.7	0.0	0.13	12.6	0.0	1.6	1	0	0	1	1	1	0	Hydin	Adenylate	kinase-like	domain
IstB_IS21	PF01695.17	gi|297621600|ref|YP_003709737.1|	-	0.098	12.4	0.0	0.28	10.9	0.0	1.8	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
PhoH	PF02562.16	gi|297621600|ref|YP_003709737.1|	-	0.14	11.6	0.0	0.33	10.4	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
HTH_22	PF13309.6	gi|297621600|ref|YP_003709737.1|	-	0.22	11.6	0.8	2.4	8.3	0.2	2.7	3	0	0	3	3	2	0	HTH	domain
DHH	PF01368.20	gi|297621601|ref|YP_003709738.1|	-	3.5e-16	59.3	0.0	5.8e-16	58.6	0.0	1.3	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.19	gi|297621601|ref|YP_003709738.1|	-	3.2e-09	37.3	0.0	2.4e-08	34.5	0.0	2.3	3	0	0	3	3	3	1	DHHA1	domain
DUF4392	PF14336.6	gi|297621601|ref|YP_003709738.1|	-	0.0013	18.3	0.0	0.0049	16.3	0.0	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4392)
Cytidylate_kin2	PF13189.6	gi|297621601|ref|YP_003709738.1|	-	0.085	13.0	0.0	0.32	11.1	0.0	1.9	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
SSB	PF00436.25	gi|297621602|ref|YP_003709739.1|	-	1.2e-30	105.7	0.0	1.4e-30	105.4	0.0	1.1	1	0	0	1	1	1	1	Single-strand	binding	protein	family
CutA1	PF03091.15	gi|297621603|ref|YP_003709740.1|	-	7e-32	109.2	1.4	7.7e-32	109.1	1.4	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
Pept_S41_N	PF18294.1	gi|297621603|ref|YP_003709740.1|	-	0.12	12.4	0.0	0.18	11.8	0.0	1.3	1	0	0	1	1	1	0	Peptidase	S41	N-terminal	domain
POTRA_1	PF08478.10	gi|297621604|ref|YP_003709741.1|	-	6.7e-05	23.1	0.0	0.00019	21.7	0.0	1.7	2	0	0	2	2	2	1	POTRA	domain,	FtsQ-type
FtsQ	PF03799.15	gi|297621604|ref|YP_003709741.1|	-	0.071	13.9	0.0	0.13	13.0	0.0	1.4	1	0	0	1	1	1	0	Cell	division	protein	FtsQ
Mur_ligase_C	PF02875.21	gi|297621605|ref|YP_003709742.1|	-	6.6e-24	84.0	0.0	1.6e-23	82.7	0.0	1.7	1	0	0	1	1	1	1	Mur	ligase	family,	glutamate	ligase	domain
Mur_ligase	PF01225.25	gi|297621605|ref|YP_003709742.1|	-	1.8e-20	73.1	0.0	3.9e-20	72.0	0.0	1.6	1	0	0	1	1	1	1	Mur	ligase	family,	catalytic	domain
Mur_ligase_M	PF08245.12	gi|297621605|ref|YP_003709742.1|	-	7.7e-20	71.7	0.0	1.2e-19	71.0	0.0	1.3	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Glyco_tran_28_C	PF04101.16	gi|297621606|ref|YP_003709743.1|	-	1.3e-33	116.4	0.0	1.8e-33	115.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_transf_28	PF03033.20	gi|297621606|ref|YP_003709743.1|	-	9.5e-28	97.0	0.0	2.3e-27	95.7	0.0	1.7	1	0	0	1	1	1	1	Glycosyltransferase	family	28	N-terminal	domain
Glyco_trans_4_4	PF13579.6	gi|297621606|ref|YP_003709743.1|	-	0.027	14.9	0.0	0.68	10.4	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferase	4-like	domain
Glyco_transf_4	PF13439.6	gi|297621606|ref|YP_003709743.1|	-	0.052	13.6	0.0	0.11	12.5	0.0	1.5	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
FTSW_RODA_SPOVE	PF01098.19	gi|297621607|ref|YP_003709744.1|	-	7.6e-79	265.3	20.6	9.9e-79	264.9	20.6	1.0	1	0	0	1	1	1	1	Cell	cycle	protein
Tetraspanin	PF00335.20	gi|297621607|ref|YP_003709744.1|	-	3.9	7.1	11.2	0.063	13.0	3.0	2.1	2	0	0	2	2	2	0	Tetraspanin	family
LysM	PF01476.20	gi|297621608|ref|YP_003709745.1|	-	1.2e-25	89.3	0.1	1.8e-14	53.5	0.1	2.3	2	0	0	2	2	2	2	LysM	domain
DUF3071	PF11268.8	gi|297621608|ref|YP_003709745.1|	-	0.14	12.2	0.1	0.45	10.6	0.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3071)
Mur_ligase_M	PF08245.12	gi|297621609|ref|YP_003709746.1|	-	3.6e-24	85.8	0.0	5.7e-24	85.2	0.0	1.3	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.21	gi|297621609|ref|YP_003709746.1|	-	7e-06	26.2	0.0	2.9e-05	24.2	0.0	2.1	1	0	0	1	1	1	1	Mur	ligase	family,	glutamate	ligase	domain
Mur_ligase	PF01225.25	gi|297621609|ref|YP_003709746.1|	-	2.3e-05	24.6	0.0	5.3e-05	23.5	0.0	1.5	1	0	0	1	1	1	1	Mur	ligase	family,	catalytic	domain
NAD_binding_8	PF13450.6	gi|297621609|ref|YP_003709746.1|	-	0.0028	17.9	0.2	0.01	16.1	0.2	2.0	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.14	gi|297621609|ref|YP_003709746.1|	-	0.004	16.4	0.1	0.01	15.1	0.1	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|297621609|ref|YP_003709746.1|	-	0.0054	16.0	0.1	0.0096	15.2	0.1	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_3	PF01494.19	gi|297621609|ref|YP_003709746.1|	-	0.006	15.9	0.1	0.01	15.1	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
TrkA_N	PF02254.18	gi|297621609|ref|YP_003709746.1|	-	0.0097	16.2	0.6	0.043	14.1	0.0	2.4	3	0	0	3	3	3	1	TrkA-N	domain
UDPG_MGDP_dh_N	PF03721.14	gi|297621609|ref|YP_003709746.1|	-	0.012	15.2	0.0	0.097	12.2	0.0	2.2	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FAD_binding_2	PF00890.24	gi|297621609|ref|YP_003709746.1|	-	0.02	14.0	0.1	0.032	13.3	0.1	1.3	1	0	0	1	1	1	0	FAD	binding	domain
3HCDH_N	PF02737.18	gi|297621609|ref|YP_003709746.1|	-	0.024	14.5	0.0	0.05	13.5	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.15	gi|297621609|ref|YP_003709746.1|	-	0.051	13.7	0.1	0.44	10.7	0.0	2.4	2	1	1	3	3	3	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DAO	PF01266.24	gi|297621609|ref|YP_003709746.1|	-	0.058	13.0	0.1	0.1	12.2	0.1	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|297621609|ref|YP_003709746.1|	-	0.066	12.3	0.4	0.22	10.6	0.4	2.0	1	1	0	1	1	1	0	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.27	gi|297621609|ref|YP_003709746.1|	-	0.085	13.4	0.0	0.44	11.1	0.0	2.3	3	0	0	3	3	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Glycos_transf_4	PF00953.21	gi|297621610|ref|YP_003709747.1|	-	1.1e-36	126.3	7.7	1.1e-36	126.3	7.7	2.3	3	1	0	3	3	3	1	Glycosyl	transferase	family	4
MraY_sig1	PF10555.9	gi|297621610|ref|YP_003709747.1|	-	0.00028	20.2	0.2	0.00094	18.6	0.2	2.0	1	0	0	1	1	1	1	Phospho-N-acetylmuramoyl-pentapeptide-transferase	signature	1
Trp_oprn_chp	PF09534.10	gi|297621610|ref|YP_003709747.1|	-	0.8	9.5	4.6	0.23	11.2	0.3	2.2	3	0	0	3	3	3	0	Tryptophan-associated	transmembrane	protein	(Trp_oprn_chp)
FA_desaturase	PF00487.24	gi|297621611|ref|YP_003709748.1|	-	1.6e-13	51.1	24.6	2.7e-13	50.4	24.6	1.4	1	0	0	1	1	1	1	Fatty	acid	desaturase
GIT1_C	PF12205.8	gi|297621611|ref|YP_003709748.1|	-	0.089	12.9	0.9	0.14	12.3	0.9	1.2	1	0	0	1	1	1	0	G	protein-coupled	receptor	kinase-interacting	protein	1	C	term
Not3	PF04065.15	gi|297621611|ref|YP_003709748.1|	-	0.095	12.1	11.1	0.13	11.6	11.1	1.1	1	0	0	1	1	1	0	Not1	N-terminal	domain,	CCR4-Not	complex	component
Choline_kin_N	PF04428.14	gi|297621611|ref|YP_003709748.1|	-	0.18	11.5	2.4	0.14	11.8	1.0	1.6	2	0	0	2	2	2	0	Choline	kinase	N	terminus
TP_methylase	PF00590.20	gi|297621612|ref|YP_003709749.1|	-	1.8e-28	99.9	0.0	2.2e-28	99.6	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Toluene_X	PF03349.16	gi|297621613|ref|YP_003709750.1|	-	3.1e-07	29.3	0.2	0.0038	15.8	0.0	2.2	1	1	1	2	2	2	2	Outer	membrane	protein	transport	protein	(OMPP1/FadL/TodX)
TonB_dep_Rec	PF00593.24	gi|297621613|ref|YP_003709750.1|	-	0.066	13.1	4.4	0.18	11.6	4.3	1.8	1	1	0	1	1	1	0	TonB	dependent	receptor
QRPTase_C	PF01729.19	gi|297621614|ref|YP_003709751.1|	-	1.7e-48	164.6	0.0	2.2e-48	164.3	0.0	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.16	gi|297621614|ref|YP_003709751.1|	-	2.4e-23	82.0	0.0	3.6e-23	81.4	0.0	1.3	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
G3P_antiterm	PF04309.12	gi|297621614|ref|YP_003709751.1|	-	0.019	14.4	0.1	0.24	10.8	0.0	2.6	2	1	1	3	3	3	0	Glycerol-3-phosphate	responsive	antiterminator
Cpn60_TCP1	PF00118.24	gi|297621615|ref|YP_003709752.1|	-	1e-82	278.3	22.1	1.9e-82	277.5	22.1	1.4	1	1	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
CaMKII_AD	PF08332.10	gi|297621615|ref|YP_003709752.1|	-	0.0062	16.7	0.0	0.16	12.1	0.0	2.4	2	0	0	2	2	2	1	Calcium/calmodulin	dependent	protein	kinase	II	association	domain
SRP54_N	PF02881.19	gi|297621615|ref|YP_003709752.1|	-	0.033	14.4	0.7	0.89	9.8	0.0	3.3	2	0	0	2	2	2	0	SRP54-type	protein,	helical	bundle	domain
Peripla_BP_2	PF01497.18	gi|297621616|ref|YP_003709753.1|	-	5e-10	39.3	0.0	8.3e-10	38.6	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
DUF4145	PF13643.6	gi|297621616|ref|YP_003709753.1|	-	0.086	13.0	0.3	1.6	8.9	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4145)
FecCD	PF01032.18	gi|297621617|ref|YP_003709754.1|	-	2.1e-73	247.1	25.2	2.5e-73	246.8	25.2	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.17	gi|297621617|ref|YP_003709754.1|	-	0.00068	19.2	9.3	0.00092	18.8	8.6	1.6	1	1	0	1	1	1	1	ABC	3	transport	family
DUF983	PF06170.12	gi|297621617|ref|YP_003709754.1|	-	0.78	10.2	5.0	0.43	11.0	1.0	2.7	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF983)
DUF1772	PF08592.11	gi|297621617|ref|YP_003709754.1|	-	4.6	7.6	15.8	1.6	9.0	7.0	3.3	2	1	2	4	4	4	0	Domain	of	unknown	function	(DUF1772)
FUSC-like	PF12805.7	gi|297621617|ref|YP_003709754.1|	-	9.6	5.2	9.5	11	5.0	4.1	2.3	1	1	1	2	2	2	0	FUSC-like	inner	membrane	protein	yccS
ABC_tran	PF00005.27	gi|297621618|ref|YP_003709755.1|	-	7.9e-35	120.4	0.0	1.5e-34	119.4	0.0	1.4	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|297621618|ref|YP_003709755.1|	-	2.1e-12	47.5	4.0	1.3e-05	25.2	0.3	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|297621618|ref|YP_003709755.1|	-	1.2e-08	34.6	0.0	4.1e-08	32.9	0.0	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|297621618|ref|YP_003709755.1|	-	4.9e-08	33.1	0.6	0.00018	21.4	0.1	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
DUF2813	PF11398.8	gi|297621618|ref|YP_003709755.1|	-	0.00036	19.9	0.4	0.19	11.0	0.1	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2813)
AAA_23	PF13476.6	gi|297621618|ref|YP_003709755.1|	-	0.001	19.6	0.7	0.001	19.6	0.7	1.5	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|297621618|ref|YP_003709755.1|	-	0.0027	17.4	0.2	0.0056	16.4	0.2	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.12	gi|297621618|ref|YP_003709755.1|	-	0.0043	17.0	0.7	0.13	12.2	0.2	2.2	2	0	0	2	2	2	1	NACHT	domain
AAA_22	PF13401.6	gi|297621618|ref|YP_003709755.1|	-	0.017	15.4	1.5	0.36	11.1	1.5	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|297621618|ref|YP_003709755.1|	-	0.031	14.0	1.8	0.84	9.3	0.4	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_13	PF13166.6	gi|297621618|ref|YP_003709755.1|	-	0.066	11.9	0.6	7.2	5.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|297621618|ref|YP_003709755.1|	-	0.079	12.7	0.1	0.18	11.5	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|297621618|ref|YP_003709755.1|	-	0.093	13.1	0.1	0.17	12.3	0.1	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
MMR_HSR1	PF01926.23	gi|297621618|ref|YP_003709755.1|	-	0.16	12.1	0.7	0.29	11.2	0.7	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
cobW	PF02492.19	gi|297621618|ref|YP_003709755.1|	-	0.18	11.4	2.4	1.4	8.5	0.4	2.2	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.6	gi|297621618|ref|YP_003709755.1|	-	0.27	11.8	1.4	1.3	9.6	0.4	2.1	2	0	0	2	2	2	0	AAA	domain
SMODS	PF18144.1	gi|297621621|ref|YP_003709758.1|	-	0.0068	16.6	0.3	0.013	15.7	0.3	1.4	1	0	0	1	1	1	1	Second	Messenger	Oligonucleotide	or	Dinucleotide	Synthetase	domain
IPK	PF03770.16	gi|297621621|ref|YP_003709758.1|	-	0.025	14.4	2.0	0.081	12.8	0.5	2.3	2	1	0	2	2	2	0	Inositol	polyphosphate	kinase
SOAR	PF16533.5	gi|297621621|ref|YP_003709758.1|	-	1.2	9.2	4.4	0.79	9.7	1.1	2.3	2	1	0	2	2	2	0	STIM1	Orai1-activating	region
SNF	PF00209.18	gi|297621624|ref|YP_003709761.1|	-	1.2e-53	182.6	35.4	1.7e-28	99.6	9.3	2.4	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
DUF3810	PF12725.7	gi|297621624|ref|YP_003709761.1|	-	0.026	13.9	0.2	0.026	13.9	0.2	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3810)
DUF3493	PF11998.8	gi|297621624|ref|YP_003709761.1|	-	8.4	6.6	8.7	13	6.0	0.1	3.4	3	0	0	3	3	3	0	Low	psii	accumulation1	/	Rep27
OppC_N	PF12911.7	gi|297621625|ref|YP_003709762.1|	-	0.012	15.6	1.5	0.016	15.2	1.5	1.2	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Syndecan	PF01034.20	gi|297621625|ref|YP_003709762.1|	-	0.69	9.9	3.8	0.78	9.7	3.8	1.1	1	0	0	1	1	1	0	Syndecan	domain
ParA	PF10609.9	gi|297621626|ref|YP_003709763.1|	-	3e-87	292.2	0.0	3.6e-87	291.9	0.0	1.0	1	0	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|297621626|ref|YP_003709763.1|	-	9.7e-14	51.5	0.0	1.5e-13	50.9	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|297621626|ref|YP_003709763.1|	-	3.8e-09	36.7	0.7	5.5e-07	29.7	0.3	2.1	2	0	0	2	2	2	1	AAA	domain
MipZ	PF09140.11	gi|297621626|ref|YP_003709763.1|	-	1.4e-07	31.1	0.3	4.4e-07	29.5	0.3	1.8	1	1	0	1	1	1	1	ATPase	MipZ
Fer4_NifH	PF00142.18	gi|297621626|ref|YP_003709763.1|	-	9.5e-06	25.2	0.0	0.00089	18.8	0.0	2.3	2	1	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.15	gi|297621626|ref|YP_003709763.1|	-	3.6e-05	23.1	1.1	0.00025	20.3	1.2	2.0	2	0	0	2	2	2	1	Anion-transporting	ATPase
AAA_25	PF13481.6	gi|297621626|ref|YP_003709763.1|	-	0.0031	17.1	0.2	0.01	15.4	0.1	1.7	2	0	0	2	2	2	1	AAA	domain
CLP1_P	PF16575.5	gi|297621626|ref|YP_003709763.1|	-	0.0075	16.1	0.0	0.012	15.4	0.0	1.3	1	0	0	1	1	1	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
MeaB	PF03308.16	gi|297621626|ref|YP_003709763.1|	-	0.013	14.5	0.3	0.019	14.0	0.3	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_26	PF13500.6	gi|297621626|ref|YP_003709763.1|	-	0.018	14.9	1.2	5.9	6.7	0.8	2.1	2	0	0	2	2	2	0	AAA	domain
VirC1	PF07015.11	gi|297621626|ref|YP_003709763.1|	-	0.029	13.7	0.1	0.052	12.8	0.1	1.3	1	0	0	1	1	1	0	VirC1	protein
CBP_BcsQ	PF06564.12	gi|297621626|ref|YP_003709763.1|	-	0.038	13.5	0.6	0.23	10.9	0.6	1.9	1	1	0	1	1	1	0	Cellulose	biosynthesis	protein	BcsQ
YhfH	PF14149.6	gi|297621626|ref|YP_003709763.1|	-	0.057	13.4	0.1	0.089	12.8	0.1	1.3	1	0	0	1	1	1	0	YhfH-like	protein
APS_kinase	PF01583.20	gi|297621626|ref|YP_003709763.1|	-	0.11	12.4	0.0	0.18	11.7	0.0	1.2	1	0	0	1	1	1	0	Adenylylsulphate	kinase
SRP54	PF00448.22	gi|297621626|ref|YP_003709763.1|	-	0.22	11.1	0.8	0.41	10.2	0.2	1.6	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
PGM_PMM_I	PF02878.16	gi|297621627|ref|YP_003709764.1|	-	7.1e-41	139.2	0.0	1.3e-40	138.3	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_III	PF02880.16	gi|297621627|ref|YP_003709764.1|	-	7.7e-24	84.1	0.0	1.4e-23	83.3	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_II	PF02879.16	gi|297621627|ref|YP_003709764.1|	-	9.5e-22	77.6	0.0	2.5e-21	76.2	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.20	gi|297621627|ref|YP_003709764.1|	-	7e-08	32.5	0.0	2.2e-07	31.0	0.0	1.8	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
DEAD	PF00270.29	gi|297621628|ref|YP_003709765.1|	-	4.2e-45	153.6	0.1	7.8e-45	152.8	0.1	1.4	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|297621628|ref|YP_003709765.1|	-	1.2e-24	86.8	0.5	9.2e-23	80.7	0.1	2.9	2	1	1	3	3	3	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|297621628|ref|YP_003709765.1|	-	3e-06	27.3	0.0	4.5e-06	26.8	0.0	1.2	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.6	gi|297621628|ref|YP_003709765.1|	-	0.0044	17.4	0.1	0.0071	16.7	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
MatB	PF16449.5	gi|297621628|ref|YP_003709765.1|	-	0.051	13.4	0.0	0.083	12.7	0.0	1.3	1	0	0	1	1	1	0	Fimbrillin	MatB
SBF_like	PF13593.6	gi|297621628|ref|YP_003709765.1|	-	0.22	10.8	0.0	0.32	10.3	0.0	1.1	1	0	0	1	1	1	0	SBF-like	CPA	transporter	family	(DUF4137)
YukD	PF08817.10	gi|297621629|ref|YP_003709766.1|	-	0.12	13.1	0.1	0.61	10.8	0.0	2.2	2	0	0	2	2	2	0	WXG100	protein	secretion	system	(Wss),	protein	YukD
IL11	PF07400.11	gi|297621630|ref|YP_003709767.1|	-	0.03	14.0	0.4	2.4	7.8	0.1	2.3	1	1	1	2	2	2	0	Interleukin	11
adh_short	PF00106.25	gi|297621631|ref|YP_003709768.1|	-	4.6e-43	147.0	0.0	5.7e-43	146.7	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|297621631|ref|YP_003709768.1|	-	1.2e-28	100.3	0.0	1.4e-28	100.0	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.10	gi|297621631|ref|YP_003709768.1|	-	7.4e-09	35.8	0.0	1.1e-08	35.1	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|297621631|ref|YP_003709768.1|	-	6.2e-08	32.4	0.0	8.1e-08	32.0	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.17	gi|297621631|ref|YP_003709768.1|	-	0.015	14.4	0.0	0.023	13.8	0.0	1.3	1	0	0	1	1	1	0	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.6	gi|297621631|ref|YP_003709768.1|	-	0.063	13.2	0.0	0.078	12.9	0.0	1.2	1	0	0	1	1	1	0	NAD(P)H-binding
GDP_Man_Dehyd	PF16363.5	gi|297621631|ref|YP_003709768.1|	-	0.082	12.3	0.0	0.14	11.5	0.0	1.5	1	1	0	1	1	1	0	GDP-mannose	4,6	dehydratase
F420_oxidored	PF03807.17	gi|297621631|ref|YP_003709768.1|	-	0.092	13.3	0.0	0.45	11.1	0.0	2.0	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
7TMR-HDED	PF07697.11	gi|297621632|ref|YP_003709769.1|	-	9.6e-37	127.2	0.0	3.2e-36	125.5	0.0	1.8	2	1	0	2	2	2	1	7TM-HD	extracellular
7TM-7TMR_HD	PF07698.11	gi|297621632|ref|YP_003709769.1|	-	2.7e-28	99.0	24.8	2.7e-28	99.0	24.8	1.5	2	0	0	2	2	2	1	7TM	receptor	with	intracellular	HD	hydrolase
HD	PF01966.22	gi|297621632|ref|YP_003709769.1|	-	1.3e-17	64.1	0.0	3.4e-17	62.8	0.0	1.7	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.12	gi|297621632|ref|YP_003709769.1|	-	0.00018	21.1	0.1	0.00044	19.8	0.1	1.7	1	0	0	1	1	1	1	HDOD	domain
HD_6	PF18019.1	gi|297621632|ref|YP_003709769.1|	-	0.019	15.1	0.0	0.04	14.1	0.0	1.5	1	0	0	1	1	1	0	HD	domain
Cpta_toxin	PF07254.12	gi|297621632|ref|YP_003709769.1|	-	2.4	8.2	4.8	0.37	10.8	0.3	2.0	2	0	0	2	2	2	0	Membrane-bound	toxin	component	of	toxin-antitoxin	system
Epimerase	PF01370.21	gi|297621634|ref|YP_003709771.1|	-	9.1e-56	189.0	0.0	1.1e-55	188.8	0.0	1.0	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|297621634|ref|YP_003709771.1|	-	7e-52	176.9	0.0	9.8e-52	176.4	0.0	1.2	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
RmlD_sub_bind	PF04321.17	gi|297621634|ref|YP_003709771.1|	-	3.1e-18	65.9	0.0	4.5e-18	65.4	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.19	gi|297621634|ref|YP_003709771.1|	-	1.6e-15	56.8	0.0	2.1e-15	56.5	0.0	1.3	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|297621634|ref|YP_003709771.1|	-	2.4e-13	49.9	0.1	2.4e-12	46.6	0.1	2.4	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|297621634|ref|YP_003709771.1|	-	7e-08	31.9	0.0	1.2e-07	31.2	0.0	1.4	1	0	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|297621634|ref|YP_003709771.1|	-	5.4e-07	29.7	0.0	7.8e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
KR	PF08659.10	gi|297621634|ref|YP_003709771.1|	-	3.7e-05	23.7	0.7	0.00049	20.0	0.7	2.4	1	1	0	1	1	1	1	KR	domain
NmrA	PF05368.13	gi|297621634|ref|YP_003709771.1|	-	0.00012	21.7	0.0	0.00022	20.9	0.0	1.4	1	0	0	1	1	1	1	NmrA-like	family
TrkA_N	PF02254.18	gi|297621634|ref|YP_003709771.1|	-	0.012	15.9	0.0	0.021	15.1	0.0	1.4	1	0	0	1	1	1	0	TrkA-N	domain
adh_short	PF00106.25	gi|297621634|ref|YP_003709771.1|	-	0.064	12.7	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|297621634|ref|YP_003709771.1|	-	0.14	11.7	0.0	0.18	11.3	0.0	1.2	1	0	0	1	1	1	0	Enoyl-(Acyl	carrier	protein)	reductase
UPF0254	PF06787.11	gi|297621635|ref|YP_003709772.1|	-	0.015	15.1	0.0	0.025	14.4	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0254)
DDE_Tnp_IS1	PF03400.13	gi|297621636|ref|YP_003709773.1|	-	2.2e-07	31.2	0.1	2.3e-07	31.2	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.6	gi|297621636|ref|YP_003709773.1|	-	0.0018	18.0	0.1	0.0024	17.6	0.1	1.3	1	0	0	1	1	1	1	Integrase	core	domain
zf-SAP30	PF13866.6	gi|297621636|ref|YP_003709773.1|	-	0.035	14.2	1.5	0.15	12.2	1.5	1.9	1	1	0	1	1	1	0	SAP30	zinc-finger
DDE_Tnp_IS1	PF03400.13	gi|297621637|ref|YP_003709774.1|	-	3.2e-12	46.9	0.1	5.3e-12	46.2	0.1	1.5	1	1	0	1	1	1	1	IS1	transposase
DDE_Tnp_IS240	PF13610.6	gi|297621637|ref|YP_003709774.1|	-	0.00035	20.8	0.0	0.00042	20.6	0.0	1.3	1	0	0	1	1	1	1	DDE	domain
DUF3734	PF12536.8	gi|297621637|ref|YP_003709774.1|	-	0.16	12.4	0.4	0.56	10.6	0.0	2.1	2	1	1	3	3	3	0	Patatin	phospholipase
rve	PF00665.26	gi|297621638|ref|YP_003709775.1|	-	4.4e-21	75.3	0.0	6.4e-21	74.7	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297621638|ref|YP_003709775.1|	-	3.9e-15	55.7	0.8	8.4e-15	54.7	0.8	1.6	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.6	gi|297621638|ref|YP_003709775.1|	-	1.9e-12	46.8	0.2	3.7e-12	45.8	0.2	1.5	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297621638|ref|YP_003709775.1|	-	0.0011	19.5	0.4	0.0011	19.5	0.4	2.4	3	0	0	3	3	3	1	Homeodomain-like	domain
rve_2	PF13333.6	gi|297621638|ref|YP_003709775.1|	-	0.01	16.0	1.0	0.021	15.0	1.0	1.5	1	0	0	1	1	1	0	Integrase	core	domain
PsiA	PF06952.11	gi|297621638|ref|YP_003709775.1|	-	0.029	13.6	3.5	0.75	9.0	0.0	2.3	2	1	0	2	2	2	0	PsiA	protein
HTH_Tnp_1	PF01527.20	gi|297621639|ref|YP_003709776.1|	-	3.2e-12	46.6	0.5	4.1e-12	46.2	0.5	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.6	gi|297621639|ref|YP_003709776.1|	-	0.00013	22.1	0.0	0.0002	21.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|297621639|ref|YP_003709776.1|	-	0.00035	20.3	0.0	0.00059	19.6	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
Zn_Tnp_IS1	PF03811.13	gi|297621640|ref|YP_003709777.1|	-	0.00018	21.2	2.7	0.00024	20.7	2.7	1.2	1	0	0	1	1	1	1	InsA	N-terminal	domain
Zn-ribbon_8	PF09723.10	gi|297621640|ref|YP_003709777.1|	-	0.02	15.0	1.9	1.7	8.8	0.3	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|297621640|ref|YP_003709777.1|	-	0.026	15.2	3.6	0.2	12.3	0.7	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DNA_ligase_ZBD	PF03119.16	gi|297621640|ref|YP_003709777.1|	-	0.079	13.0	1.5	0.2	11.7	0.2	2.0	1	1	1	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-H2C2_2	PF13465.6	gi|297621640|ref|YP_003709777.1|	-	0.48	10.9	3.4	2.6	8.6	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
Rad50_zn_hook	PF04423.14	gi|297621640|ref|YP_003709777.1|	-	0.9	9.4	4.3	1.2	9.1	0.6	2.3	1	1	1	2	2	2	0	Rad50	zinc	hook	motif
Sipho_Gp157	PF05565.11	gi|297621641|ref|YP_003709778.1|	-	0.00039	20.5	4.7	0.00039	20.5	4.7	1.9	1	1	0	1	1	1	1	Siphovirus	Gp157
Hemerythrin	PF01814.23	gi|297621641|ref|YP_003709778.1|	-	0.0043	17.7	0.6	0.0069	17.0	0.5	1.4	1	1	0	1	1	1	1	Hemerythrin	HHE	cation	binding	domain
Surfac_D-trimer	PF09006.11	gi|297621641|ref|YP_003709778.1|	-	0.0056	16.5	0.7	0.3	11.0	0.1	2.7	2	0	0	2	2	2	1	Lung	surfactant	protein	D	coiled-coil	trimerisation
BST2	PF16716.5	gi|297621641|ref|YP_003709778.1|	-	0.0076	16.8	1.9	0.0076	16.8	1.9	2.0	2	1	1	3	3	2	1	Bone	marrow	stromal	antigen	2
FH2	PF02181.23	gi|297621641|ref|YP_003709778.1|	-	0.014	14.5	4.2	0.017	14.3	4.2	1.2	1	0	0	1	1	1	0	Formin	Homology	2	Domain
Nucleo_P87	PF07267.11	gi|297621641|ref|YP_003709778.1|	-	0.023	13.6	2.9	0.025	13.4	2.9	1.0	1	0	0	1	1	1	0	Nucleopolyhedrovirus	capsid	protein	P87
Laminin_II	PF06009.12	gi|297621641|ref|YP_003709778.1|	-	0.036	14.1	6.8	0.062	13.3	2.2	2.3	1	1	2	3	3	3	0	Laminin	Domain	II
Gp-FAR-1	PF05823.12	gi|297621641|ref|YP_003709778.1|	-	0.045	14.1	6.9	0.065	13.6	0.7	2.3	1	1	1	2	2	2	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
DUF4795	PF16043.5	gi|297621641|ref|YP_003709778.1|	-	0.068	12.8	8.3	0.12	12.0	8.3	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
Rad60-SLD	PF11976.8	gi|297621641|ref|YP_003709778.1|	-	0.1	12.5	2.4	2	8.3	0.2	2.9	3	0	0	3	3	3	0	Ubiquitin-2	like	Rad60	SUMO-like
WASH-7_C	PF14746.6	gi|297621641|ref|YP_003709778.1|	-	0.11	12.1	3.3	0.06	13.0	0.9	1.7	1	1	0	1	1	1	0	WASH	complex	subunit	7,	C-terminal
Snapin_Pallidin	PF14712.6	gi|297621641|ref|YP_003709778.1|	-	0.12	12.8	0.4	0.12	12.8	0.4	2.8	1	1	2	3	3	3	0	Snapin/Pallidin
FapA	PF03961.13	gi|297621641|ref|YP_003709778.1|	-	0.14	10.7	8.3	0.055	12.1	5.5	1.5	1	1	0	1	1	1	0	Flagellar	Assembly	Protein	A
Fib_alpha	PF08702.10	gi|297621641|ref|YP_003709778.1|	-	0.19	11.9	2.9	0.4	10.9	2.9	1.7	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
IF-2B	PF01008.17	gi|297621641|ref|YP_003709778.1|	-	0.71	9.0	4.7	0.31	10.2	0.3	1.9	1	1	1	2	2	2	0	Initiation	factor	2	subunit	family
AAA_23	PF13476.6	gi|297621641|ref|YP_003709778.1|	-	0.89	10.0	9.3	1.2	9.6	9.3	1.2	1	0	0	1	1	1	0	AAA	domain
Rho_Binding	PF08912.11	gi|297621641|ref|YP_003709778.1|	-	0.95	10.3	13.4	0.36	11.7	1.3	3.0	2	1	1	3	3	3	0	Rho	Binding
APG6_N	PF17675.1	gi|297621641|ref|YP_003709778.1|	-	1.9	9.0	11.7	11	6.5	0.4	2.2	2	0	0	2	2	2	0	Apg6	coiled-coil	region
DUF16	PF01519.16	gi|297621641|ref|YP_003709778.1|	-	3.6	8.1	8.7	38	4.9	8.7	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
DUF5082	PF16888.5	gi|297621641|ref|YP_003709778.1|	-	4	7.7	11.2	0.099	12.9	1.7	2.7	2	2	0	3	3	3	0	Domain	of	unknown	function	(DUF5082)
DUF5339	PF17274.2	gi|297621641|ref|YP_003709778.1|	-	4	8.4	10.2	0.32	11.9	0.5	2.5	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5339)
DUF4140	PF13600.6	gi|297621641|ref|YP_003709778.1|	-	8.7	6.9	9.7	5	7.6	0.3	2.5	2	1	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
DNA_pol3_delta2	PF13177.6	gi|297621642|ref|YP_003709779.1|	-	1.7e-46	158.0	0.0	3.4e-46	157.0	0.0	1.5	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
DNA_pol3_gamma3	PF12169.8	gi|297621642|ref|YP_003709779.1|	-	1.1e-14	54.6	0.1	1.7e-14	53.9	0.1	1.4	1	0	0	1	1	1	1	DNA	polymerase	III	subunits	gamma	and	tau	domain	III
AAA	PF00004.29	gi|297621642|ref|YP_003709779.1|	-	3.7e-12	46.8	0.1	1.4e-11	44.9	0.0	2.0	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.14	gi|297621642|ref|YP_003709779.1|	-	1.9e-06	27.9	0.3	9.6e-05	22.4	0.1	3.1	3	1	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.12	gi|297621642|ref|YP_003709779.1|	-	2.9e-06	27.1	0.1	0.00014	21.7	0.0	2.4	1	1	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_16	PF13191.6	gi|297621642|ref|YP_003709779.1|	-	8.1e-06	26.3	0.7	0.00025	21.5	0.0	2.7	1	1	1	2	2	2	1	AAA	ATPase	domain
TIP49	PF06068.13	gi|297621642|ref|YP_003709779.1|	-	1.6e-05	24.3	0.0	0.072	12.3	0.0	2.3	2	0	0	2	2	2	2	TIP49	P-loop	domain
AAA_22	PF13401.6	gi|297621642|ref|YP_003709779.1|	-	1.8e-05	25.0	0.1	0.00018	21.8	0.0	2.4	2	1	0	2	2	1	1	AAA	domain
AAA_14	PF13173.6	gi|297621642|ref|YP_003709779.1|	-	0.00014	21.9	0.1	0.00084	19.4	0.0	2.2	2	1	0	2	2	1	1	AAA	domain
ResIII	PF04851.15	gi|297621642|ref|YP_003709779.1|	-	0.00065	19.7	0.0	1.9	8.5	0.0	2.5	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
AAA_30	PF13604.6	gi|297621642|ref|YP_003709779.1|	-	0.0013	18.5	0.1	0.0062	16.3	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
Glyco_tranf_2_5	PF13712.6	gi|297621642|ref|YP_003709779.1|	-	0.0074	16.0	0.0	0.016	14.9	0.0	1.5	2	0	0	2	2	2	1	Glycosyltransferase	like	family
AAA_24	PF13479.6	gi|297621642|ref|YP_003709779.1|	-	0.008	15.9	0.0	0.015	15.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
TniB	PF05621.11	gi|297621642|ref|YP_003709779.1|	-	0.014	14.8	0.0	0.096	12.1	0.0	2.1	1	1	0	1	1	1	0	Bacterial	TniB	protein
TsaE	PF02367.17	gi|297621642|ref|YP_003709779.1|	-	0.016	15.2	0.0	0.034	14.2	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_7	PF12775.7	gi|297621642|ref|YP_003709779.1|	-	0.017	14.7	0.0	0.69	9.4	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
ATPase	PF06745.13	gi|297621642|ref|YP_003709779.1|	-	0.018	14.4	0.6	0.37	10.1	0.0	2.7	3	0	0	3	3	3	0	KaiC
AAA_18	PF13238.6	gi|297621642|ref|YP_003709779.1|	-	0.043	14.4	0.0	0.1	13.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|297621642|ref|YP_003709779.1|	-	0.068	13.3	0.0	0.46	10.7	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
PIF1	PF05970.14	gi|297621642|ref|YP_003709779.1|	-	0.07	12.3	0.1	0.23	10.6	0.1	1.7	1	1	0	1	1	1	0	PIF1-like	helicase
Zeta_toxin	PF06414.12	gi|297621642|ref|YP_003709779.1|	-	0.07	12.4	0.0	0.14	11.5	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
Sigma54_activ_2	PF14532.6	gi|297621642|ref|YP_003709779.1|	-	0.096	12.8	0.1	2.3	8.3	0.0	2.8	2	1	0	2	2	2	0	Sigma-54	interaction	domain
NACHT	PF05729.12	gi|297621642|ref|YP_003709779.1|	-	0.13	12.2	0.0	0.83	9.6	0.0	2.3	2	0	0	2	2	2	0	NACHT	domain
RNA_helicase	PF00910.22	gi|297621642|ref|YP_003709779.1|	-	0.13	12.7	0.0	0.34	11.3	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
Bac_DnaA	PF00308.18	gi|297621642|ref|YP_003709779.1|	-	0.13	12.1	0.5	0.81	9.5	0.0	2.4	3	1	0	3	3	3	0	Bacterial	dnaA	protein
SKI	PF01202.22	gi|297621642|ref|YP_003709779.1|	-	0.13	12.4	0.0	0.5	10.5	0.0	2.0	2	0	0	2	2	1	0	Shikimate	kinase
YbaB_DNA_bd	PF02575.16	gi|297621643|ref|YP_003709780.1|	-	2e-26	92.0	0.8	2.4e-26	91.8	0.8	1.0	1	0	0	1	1	1	1	YbaB/EbfC	DNA-binding	family
AAL_decarboxy	PF03306.13	gi|297621643|ref|YP_003709780.1|	-	0.022	14.1	0.0	0.023	14.0	0.0	1.0	1	0	0	1	1	1	0	Alpha-acetolactate	decarboxylase
PEP-utilizers_C	PF02896.18	gi|297621644|ref|YP_003709781.1|	-	1.1e-95	320.1	0.0	2e-95	319.3	0.0	1.4	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilisers_N	PF05524.13	gi|297621644|ref|YP_003709781.1|	-	4.4e-22	78.4	0.3	1.2e-21	77.0	0.3	1.7	1	0	0	1	1	1	1	PEP-utilising	enzyme,	N-terminal
PEP-utilizers	PF00391.23	gi|297621644|ref|YP_003709781.1|	-	1.8e-15	56.4	0.0	4e-15	55.3	0.0	1.6	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
OmpH	PF03938.14	gi|297621644|ref|YP_003709781.1|	-	0.0067	16.8	1.3	0.015	15.7	0.4	2.0	2	0	0	2	2	2	1	Outer	membrane	protein	(OmpH-like)
DUF1548	PF07579.11	gi|297621644|ref|YP_003709781.1|	-	0.0085	16.4	0.0	0.026	14.9	0.0	1.8	1	0	0	1	1	1	1	Domain	of	Unknown	Function	(DUF1548)
HpcH_HpaI	PF03328.14	gi|297621644|ref|YP_003709781.1|	-	0.01	15.0	0.0	0.024	13.8	0.0	1.6	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
Bcr-Abl_Oligo	PF09036.10	gi|297621644|ref|YP_003709781.1|	-	0.033	14.2	0.2	0.1	12.6	0.2	1.8	1	0	0	1	1	1	0	Bcr-Abl	oncoprotein	oligomerisation	domain
MutS_IV	PF05190.18	gi|297621644|ref|YP_003709781.1|	-	0.46	10.9	3.1	1.9	8.9	1.8	2.5	2	0	0	2	2	2	0	MutS	family	domain	IV
CCDC-167	PF15188.6	gi|297621644|ref|YP_003709781.1|	-	0.51	10.7	2.7	1.5	9.2	2.7	1.8	1	1	0	1	1	1	0	Coiled-coil	domain-containing	protein	167
PTS-HPr	PF00381.19	gi|297621645|ref|YP_003709782.1|	-	1e-24	86.5	0.4	1.1e-24	86.4	0.4	1.0	1	0	0	1	1	1	1	PTS	HPr	component	phosphorylation	site
DUF2181	PF10223.9	gi|297621645|ref|YP_003709782.1|	-	0.038	13.4	0.1	0.042	13.3	0.1	1.0	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2181)
CaiF_GrlA	PF07180.11	gi|297621645|ref|YP_003709782.1|	-	0.042	13.8	0.1	0.047	13.7	0.1	1.2	1	0	0	1	1	1	0	CaiF/GrlA	transcriptional	regulator
Hpr_kinase_C	PF07475.12	gi|297621646|ref|YP_003709783.1|	-	2.1e-64	216.2	0.2	2.7e-64	215.8	0.2	1.1	1	0	0	1	1	1	1	HPr	Serine	kinase	C-terminal	domain
Hpr_kinase_N	PF02603.16	gi|297621646|ref|YP_003709783.1|	-	2.4e-31	108.4	0.0	3.9e-31	107.7	0.0	1.3	1	0	0	1	1	1	1	HPr	Serine	kinase	N	terminus
DRTGG	PF07085.12	gi|297621646|ref|YP_003709783.1|	-	0.0056	16.5	0.0	0.01	15.6	0.0	1.4	1	0	0	1	1	1	1	DRTGG	domain
SMI1_KNR4	PF09346.10	gi|297621647|ref|YP_003709784.1|	-	6.6e-07	29.8	0.0	1.1e-06	29.0	0.0	1.4	1	0	0	1	1	1	1	SMI1	/	KNR4	family	(SUKH-1)
SUKH_6	PF14568.6	gi|297621647|ref|YP_003709784.1|	-	0.02	15.3	0.1	0.037	14.5	0.1	1.5	1	0	0	1	1	1	0	SMI1-KNR4	cell-wall
PAS_3	PF08447.12	gi|297621647|ref|YP_003709784.1|	-	0.04	14.2	0.1	2.9	8.2	0.0	2.5	2	1	0	2	2	2	0	PAS	fold
Pyr_redox_2	PF07992.14	gi|297621648|ref|YP_003709785.1|	-	0.0001	21.7	0.0	0.00011	21.5	0.0	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Competence	PF03772.16	gi|297621649|ref|YP_003709786.1|	-	6.3e-39	133.9	34.1	6.3e-39	133.9	34.1	1.6	2	0	0	2	2	2	1	Competence	protein
BacA	PF02673.18	gi|297621650|ref|YP_003709787.1|	-	2.2e-67	227.5	16.1	2.5e-67	227.3	16.1	1.0	1	0	0	1	1	1	1	Bacitracin	resistance	protein	BacA
AcrZ	PF10766.9	gi|297621650|ref|YP_003709787.1|	-	0.042	13.4	0.0	0.11	12.0	0.0	1.7	1	0	0	1	1	1	0	Multidrug	efflux	pump-associated	protein	AcrZ
Flp1_like	PF16982.5	gi|297621650|ref|YP_003709787.1|	-	1.1	8.6	4.7	0.22	11.0	0.3	2.1	2	0	0	2	2	2	0	Putative	Flagellin,	Flp1-like,	domain
DUF373	PF04123.13	gi|297621650|ref|YP_003709787.1|	-	4	6.8	6.5	2.6	7.4	2.3	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF373)
FtsK_SpoIIIE	PF01580.18	gi|297621651|ref|YP_003709788.1|	-	6.1e-54	182.9	1.3	7.7e-52	176.1	1.3	2.2	1	1	0	1	1	1	1	FtsK/SpoIIIE	family
FtsK_alpha	PF17854.1	gi|297621651|ref|YP_003709788.1|	-	2.3e-32	111.2	0.2	5.6e-32	109.9	0.2	1.7	1	0	0	1	1	1	1	FtsK	alpha	domain
FtsK_gamma	PF09397.10	gi|297621651|ref|YP_003709788.1|	-	2.9e-27	94.2	0.0	6.7e-27	93.1	0.0	1.7	1	0	0	1	1	1	1	Ftsk	gamma	domain
AAA_10	PF12846.7	gi|297621651|ref|YP_003709788.1|	-	7.1e-07	28.5	0.0	1.1e-05	24.5	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
FtsK_4TM	PF13491.6	gi|297621651|ref|YP_003709788.1|	-	0.00016	21.4	16.9	0.00058	19.6	16.9	1.9	1	1	0	1	1	1	1	4TM	region	of	DNA	translocase	FtsK/SpoIIIE
AAA_22	PF13401.6	gi|297621651|ref|YP_003709788.1|	-	0.0009	19.5	0.0	0.0033	17.7	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
TniB	PF05621.11	gi|297621651|ref|YP_003709788.1|	-	0.002	17.5	0.8	1.5	8.2	0.0	3.3	3	0	0	3	3	3	1	Bacterial	TniB	protein
TrwB_AAD_bind	PF10412.9	gi|297621651|ref|YP_003709788.1|	-	0.0037	16.2	0.0	0.09	11.7	0.0	2.1	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
T2SSE	PF00437.20	gi|297621651|ref|YP_003709788.1|	-	0.005	15.9	0.0	0.0092	15.1	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DUF87	PF01935.17	gi|297621651|ref|YP_003709788.1|	-	0.012	15.7	1.3	0.016	15.3	0.1	1.8	2	1	0	2	2	2	0	Helicase	HerA,	central	domain
DEAD	PF00270.29	gi|297621651|ref|YP_003709788.1|	-	0.017	14.9	0.3	0.051	13.4	0.3	1.8	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|297621651|ref|YP_003709788.1|	-	0.08	12.9	0.0	0.26	11.3	0.0	1.9	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
Cupin_4	PF08007.12	gi|297621651|ref|YP_003709788.1|	-	0.082	12.4	0.0	0.17	11.3	0.0	1.4	1	0	0	1	1	1	0	Cupin	superfamily	protein
AAA_19	PF13245.6	gi|297621651|ref|YP_003709788.1|	-	0.11	12.9	0.3	0.26	11.6	0.3	1.6	1	1	0	1	1	1	0	AAA	domain
Lactamase_B_2	PF12706.7	gi|297621652|ref|YP_003709789.1|	-	3.1e-20	72.6	0.2	4.3e-20	72.1	0.2	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|297621652|ref|YP_003709789.1|	-	1.8e-16	60.7	0.1	3.2e-16	59.9	0.1	1.3	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_6	PF16661.5	gi|297621652|ref|YP_003709789.1|	-	1.6e-05	24.5	0.0	3.1e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|297621652|ref|YP_003709789.1|	-	0.00014	21.8	0.1	0.00035	20.5	0.1	1.8	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
DnaJ_C	PF01556.18	gi|297621653|ref|YP_003709790.1|	-	2.9e-39	134.5	0.0	3.7e-39	134.2	0.0	1.1	1	0	0	1	1	1	1	DnaJ	C	terminal	domain
DnaJ	PF00226.31	gi|297621653|ref|YP_003709790.1|	-	1.5e-30	105.1	3.7	2.5e-30	104.4	3.7	1.4	1	0	0	1	1	1	1	DnaJ	domain
DnaJ_CXXCXGXG	PF00684.19	gi|297621653|ref|YP_003709790.1|	-	4.2e-11	43.0	20.6	7.9e-11	42.2	20.6	1.5	1	0	0	1	1	1	1	DnaJ	central	domain
Anti-TRAP	PF15777.5	gi|297621653|ref|YP_003709790.1|	-	0.01	15.8	4.1	0.01	15.8	4.1	3.1	1	1	2	3	3	3	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
TackOD1	PF18551.1	gi|297621653|ref|YP_003709790.1|	-	1	9.0	8.4	0.095	12.4	0.8	2.1	1	1	1	2	2	2	0	Thaumarchaeal	output	domain	1
DZR	PF12773.7	gi|297621653|ref|YP_003709790.1|	-	1.9	8.5	12.8	3.7	7.7	12.8	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
Cytochrome_C7	PF14522.6	gi|297621653|ref|YP_003709790.1|	-	2.2	8.4	13.6	4	7.5	5.4	2.8	2	1	0	2	2	2	0	Cytochrome	c7	and	related	cytochrome	c
Cytochrom_C550	PF14495.6	gi|297621653|ref|YP_003709790.1|	-	2.6	7.7	5.7	11	5.7	4.5	2.2	1	1	1	2	2	2	0	Cytochrome	c-550	domain
Lar_restr_allev	PF14354.6	gi|297621653|ref|YP_003709790.1|	-	4.5	7.7	11.6	7.4	7.0	6.7	3.0	1	1	2	3	3	3	0	Restriction	alleviation	protein	Lar
DUF5351	PF17302.2	gi|297621653|ref|YP_003709790.1|	-	8.4	6.7	19.0	3.7	7.8	0.4	4.4	4	0	0	4	4	4	0	Family	of	unknown	function	(DUF5351)
Ribosomal_S21	PF01165.20	gi|297621655|ref|YP_003709792.1|	-	4.6e-17	61.5	4.1	4.9e-17	61.4	4.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S21
RBD	PF02196.15	gi|297621655|ref|YP_003709792.1|	-	0.024	14.7	0.1	0.027	14.5	0.1	1.3	1	1	0	1	1	1	0	Raf-like	Ras-binding	domain
Peptidase_M22	PF00814.25	gi|297621656|ref|YP_003709793.1|	-	8.3e-21	74.9	0.0	1.1e-20	74.5	0.0	1.2	1	0	0	1	1	1	1	Glycoprotease	family
HD_assoc	PF13286.6	gi|297621657|ref|YP_003709794.1|	-	3.2e-12	46.8	0.1	7.3e-12	45.7	0.1	1.7	1	0	0	1	1	1	1	Phosphohydrolase-associated	domain
HD	PF01966.22	gi|297621657|ref|YP_003709794.1|	-	3.6e-08	33.7	0.0	8.6e-08	32.4	0.0	1.7	1	0	0	1	1	1	1	HD	domain
Xpo1	PF08389.12	gi|297621658|ref|YP_003709795.1|	-	0.25	11.4	2.8	0.22	11.6	0.4	2.0	2	0	0	2	2	2	0	Exportin	1-like	protein
MnmE_helical	PF12631.7	gi|297621658|ref|YP_003709795.1|	-	0.46	10.6	2.7	1	9.5	1.3	2.1	2	0	0	2	2	2	0	MnmE	helical	domain
ApoC-I	PF04691.12	gi|297621658|ref|YP_003709795.1|	-	1	9.3	5.3	1.6	8.7	0.1	3.1	3	0	0	3	3	3	0	Apolipoprotein	C-I	(ApoC-1)
BLOC1_2	PF10046.9	gi|297621658|ref|YP_003709795.1|	-	1	9.7	6.1	2	8.8	0.1	3.0	1	1	2	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
UPF0449	PF15136.6	gi|297621658|ref|YP_003709795.1|	-	1.1	9.8	6.3	2.4	8.7	1.9	2.8	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
DUF1128	PF06569.11	gi|297621659|ref|YP_003709796.1|	-	0.012	15.6	0.0	0.036	14.0	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1128)
Aida_N	PF08910.10	gi|297621659|ref|YP_003709796.1|	-	0.092	13.1	0.1	0.38	11.2	0.0	2.0	2	0	0	2	2	2	0	Aida	N-terminus
Lon_C	PF05362.13	gi|297621660|ref|YP_003709797.1|	-	1.7e-75	253.0	0.4	7.2e-75	251.0	0.0	2.2	2	1	1	3	3	3	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
LON_substr_bdg	PF02190.16	gi|297621660|ref|YP_003709797.1|	-	7.6e-29	101.1	0.8	1.4e-28	100.2	0.8	1.5	1	0	0	1	1	1	1	ATP-dependent	protease	La	(LON)	substrate-binding	domain
AAA	PF00004.29	gi|297621660|ref|YP_003709797.1|	-	4.3e-22	79.0	0.0	9.5e-22	77.8	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.14	gi|297621660|ref|YP_003709797.1|	-	6.5e-08	32.7	0.0	1.3e-07	31.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
ChlI	PF13541.6	gi|297621660|ref|YP_003709797.1|	-	1e-07	31.8	0.0	3.4e-07	30.1	0.0	1.9	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
AAA_2	PF07724.14	gi|297621660|ref|YP_003709797.1|	-	1.4e-05	25.3	0.0	3.3e-05	24.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.6	gi|297621660|ref|YP_003709797.1|	-	3.2e-05	24.2	1.6	0.0069	16.7	0.1	3.5	2	2	0	2	2	2	1	AAA	domain
AAA_PrkA	PF08298.11	gi|297621660|ref|YP_003709797.1|	-	0.00035	19.6	0.0	0.0012	17.9	0.0	1.8	2	0	0	2	2	2	1	PrkA	AAA	domain
AAA_18	PF13238.6	gi|297621660|ref|YP_003709797.1|	-	0.0005	20.6	0.0	0.0011	19.5	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|297621660|ref|YP_003709797.1|	-	0.00054	20.4	0.1	0.0023	18.3	0.1	2.0	1	1	1	2	2	2	1	AAA	ATPase	domain
RNA_helicase	PF00910.22	gi|297621660|ref|YP_003709797.1|	-	0.0043	17.4	0.0	0.011	16.1	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
RuvB_N	PF05496.12	gi|297621660|ref|YP_003709797.1|	-	0.0044	16.8	0.0	0.016	14.9	0.0	1.9	2	0	0	2	2	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
ABC_tran	PF00005.27	gi|297621660|ref|YP_003709797.1|	-	0.031	14.8	0.5	0.48	10.9	0.0	2.7	2	1	0	2	2	2	0	ABC	transporter
SKI	PF01202.22	gi|297621660|ref|YP_003709797.1|	-	0.039	14.1	1.0	0.1	12.7	0.0	2.1	2	0	0	2	2	2	0	Shikimate	kinase
NTPase_1	PF03266.15	gi|297621660|ref|YP_003709797.1|	-	0.042	13.8	0.1	0.13	12.2	0.1	1.8	1	0	0	1	1	1	0	NTPase
Pox_D5	PF03288.16	gi|297621660|ref|YP_003709797.1|	-	0.046	14.2	1.9	0.12	12.9	0.1	2.6	2	1	1	3	3	2	0	Poxvirus	D5	protein-like
MCM	PF00493.23	gi|297621660|ref|YP_003709797.1|	-	0.053	12.6	0.0	0.11	11.5	0.0	1.5	1	0	0	1	1	1	0	MCM	P-loop	domain
AAA_3	PF07726.11	gi|297621660|ref|YP_003709797.1|	-	0.054	13.4	0.0	0.12	12.2	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.17	gi|297621660|ref|YP_003709797.1|	-	0.077	12.7	0.0	0.19	11.5	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_30	PF13604.6	gi|297621660|ref|YP_003709797.1|	-	0.093	12.4	0.0	0.25	11.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|297621660|ref|YP_003709797.1|	-	0.11	12.4	1.2	0.29	11.0	0.0	2.3	3	0	0	3	3	2	0	RsgA	GTPase
ATP-synt_ab	PF00006.25	gi|297621660|ref|YP_003709797.1|	-	0.13	11.9	0.0	0.17	11.5	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
5_3_exonuc	PF01367.20	gi|297621660|ref|YP_003709797.1|	-	9.3	6.9	7.3	2.6	8.7	0.9	2.9	3	0	0	3	3	2	0	5'-3'	exonuclease,	C-terminal	SAM	fold
CTP_transf_like	PF01467.26	gi|297621661|ref|YP_003709798.1|	-	2.8e-11	43.8	0.0	3.9e-11	43.3	0.0	1.3	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|297621661|ref|YP_003709798.1|	-	0.027	14.4	0.0	0.044	13.7	0.0	1.5	1	1	0	1	1	1	0	FAD	synthetase
Pantoate_ligase	PF02569.15	gi|297621661|ref|YP_003709798.1|	-	0.072	12.3	0.0	0.13	11.5	0.0	1.4	1	0	0	1	1	1	0	Pantoate-beta-alanine	ligase
Rhomboid	PF01694.22	gi|297621662|ref|YP_003709799.1|	-	1.5e-29	102.9	10.5	2.7e-29	102.1	10.5	1.4	1	0	0	1	1	1	1	Rhomboid	family
Rhomboid_N	PF12122.8	gi|297621662|ref|YP_003709799.1|	-	1.4e-08	34.8	0.0	3.9e-08	33.4	0.0	1.7	1	1	0	1	1	1	1	Cytoplasmic	N-terminal	domain	of	rhomboid	serine	protease
DUF1967	PF09269.11	gi|297621662|ref|YP_003709799.1|	-	0.15	12.0	0.0	0.31	11.0	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1967)
DUF1751	PF08551.10	gi|297621662|ref|YP_003709799.1|	-	0.19	12.3	7.3	0.042	14.4	3.0	2.2	2	1	0	2	2	2	0	Eukaryotic	integral	membrane	protein	(DUF1751)
DUF5437	PF17505.2	gi|297621662|ref|YP_003709799.1|	-	0.3	11.2	4.2	3.1	7.9	0.1	3.3	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5437)
Lactamase_B_2	PF12706.7	gi|297621663|ref|YP_003709800.1|	-	1.3e-15	57.5	2.6	5.3e-13	49.0	2.6	2.1	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|297621663|ref|YP_003709800.1|	-	1.9e-09	37.8	1.3	1e-08	35.5	0.2	2.1	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
baeRF_family10	PF18854.1	gi|297621663|ref|YP_003709800.1|	-	0.081	13.2	0.2	0.14	12.4	0.2	1.3	1	0	0	1	1	1	0	Bacterial	archaeo-eukaryotic	release	factor	family	10
Lactamase_B_4	PF13691.6	gi|297621663|ref|YP_003709800.1|	-	0.084	12.6	0.0	0.19	11.5	0.0	1.6	1	0	0	1	1	1	0	tRNase	Z	endonuclease
NmrA	PF05368.13	gi|297621663|ref|YP_003709800.1|	-	0.17	11.4	0.0	0.3	10.6	0.0	1.4	1	0	0	1	1	1	0	NmrA-like	family
Phage_integrase	PF00589.22	gi|297621664|ref|YP_003709801.1|	-	1.1e-43	149.0	0.2	2.2e-43	148.0	0.2	1.4	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.17	gi|297621664|ref|YP_003709801.1|	-	1.7e-16	60.3	3.5	2e-16	60.0	1.4	2.2	3	0	0	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.6	gi|297621664|ref|YP_003709801.1|	-	7.9e-11	42.3	4.2	6e-10	39.5	0.4	3.0	3	0	0	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_5	PF13102.6	gi|297621664|ref|YP_003709801.1|	-	1.5e-08	34.9	1.7	8.7e-08	32.4	0.2	2.4	2	1	0	2	2	2	1	Phage	integrase	SAM-like	domain
Integrase_1	PF12835.7	gi|297621664|ref|YP_003709801.1|	-	0.066	13.3	0.1	0.15	12.2	0.1	1.6	1	0	0	1	1	1	0	Integrase
Glycos_transf_1	PF00534.20	gi|297621665|ref|YP_003709802.1|	-	5.8e-11	42.2	0.0	1.2e-10	41.2	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|297621665|ref|YP_003709802.1|	-	5.6e-10	39.8	0.0	1.6e-09	38.3	0.0	1.8	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|297621665|ref|YP_003709802.1|	-	5.7e-08	33.0	0.0	1.6e-07	31.6	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|297621666|ref|YP_003709803.1|	-	8.6e-10	38.4	0.0	1.9e-09	37.3	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|297621666|ref|YP_003709803.1|	-	1.3e-07	32.1	0.0	2.9e-07	31.0	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|297621666|ref|YP_003709803.1|	-	1.2e-05	25.6	0.0	3.2e-05	24.2	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
ABC_tran	PF00005.27	gi|297621667|ref|YP_003709804.1|	-	1.2e-44	152.2	0.3	5.2e-21	75.6	0.0	2.8	3	0	0	3	3	3	2	ABC	transporter
ABC_tran_Xtn	PF12848.7	gi|297621667|ref|YP_003709804.1|	-	2.7e-16	59.4	5.9	1.5e-15	57.0	3.3	2.2	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|297621667|ref|YP_003709804.1|	-	1.7e-13	51.1	0.9	0.002	18.0	0.0	4.4	4	0	0	4	4	4	3	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|297621667|ref|YP_003709804.1|	-	1.9e-07	30.7	4.4	0.11	11.9	0.8	4.0	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|297621667|ref|YP_003709804.1|	-	5.2e-07	29.3	0.3	0.0071	16.1	0.0	2.6	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA	PF00004.29	gi|297621667|ref|YP_003709804.1|	-	3.5e-06	27.5	1.1	0.09	13.2	0.0	3.6	3	1	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RsgA_GTPase	PF03193.16	gi|297621667|ref|YP_003709804.1|	-	9e-06	25.7	0.9	0.018	15.0	0.1	2.5	2	0	0	2	2	2	2	RsgA	GTPase
AAA_23	PF13476.6	gi|297621667|ref|YP_003709804.1|	-	7.6e-05	23.3	13.6	0.0007	20.2	0.2	3.4	2	1	1	3	3	3	2	AAA	domain
MeaB	PF03308.16	gi|297621667|ref|YP_003709804.1|	-	0.00017	20.7	1.1	0.31	10.0	0.1	2.4	2	0	0	2	2	2	2	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_18	PF13238.6	gi|297621667|ref|YP_003709804.1|	-	0.00023	21.7	0.8	0.74	10.4	0.0	2.9	3	1	0	3	3	2	2	AAA	domain
NTPase_1	PF03266.15	gi|297621667|ref|YP_003709804.1|	-	0.00029	20.8	0.7	0.97	9.3	0.0	2.7	2	0	0	2	2	2	2	NTPase
RNA_helicase	PF00910.22	gi|297621667|ref|YP_003709804.1|	-	0.0003	21.1	0.1	0.83	10.1	0.0	2.6	2	0	0	2	2	2	2	RNA	helicase
NACHT	PF05729.12	gi|297621667|ref|YP_003709804.1|	-	0.00035	20.5	0.4	0.99	9.3	0.1	2.4	2	0	0	2	2	2	2	NACHT	domain
ATP-synt_ab	PF00006.25	gi|297621667|ref|YP_003709804.1|	-	0.00038	20.2	0.0	0.76	9.4	0.0	2.4	2	1	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_28	PF13521.6	gi|297621667|ref|YP_003709804.1|	-	0.00039	20.7	0.0	0.64	10.3	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
MMR_HSR1	PF01926.23	gi|297621667|ref|YP_003709804.1|	-	0.00055	20.0	1.5	0.97	9.5	0.3	2.9	2	2	0	2	2	2	2	50S	ribosome-binding	GTPase
AAA_22	PF13401.6	gi|297621667|ref|YP_003709804.1|	-	0.00056	20.2	0.7	1.5	9.1	0.1	2.9	2	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.6	gi|297621667|ref|YP_003709804.1|	-	0.00057	19.7	7.2	0.036	13.8	0.2	3.0	4	0	0	4	4	3	2	AAA	ATPase	domain
AAA_16	PF13191.6	gi|297621667|ref|YP_003709804.1|	-	0.00082	19.8	0.0	1.1	9.7	0.0	2.7	3	0	0	3	3	2	1	AAA	ATPase	domain
AAA_30	PF13604.6	gi|297621667|ref|YP_003709804.1|	-	0.0011	18.7	0.0	1.7	8.3	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
NB-ARC	PF00931.22	gi|297621667|ref|YP_003709804.1|	-	0.0015	17.8	1.2	0.75	8.9	0.2	2.6	2	1	0	2	2	2	2	NB-ARC	domain
AAA_24	PF13479.6	gi|297621667|ref|YP_003709804.1|	-	0.0023	17.7	0.7	1.4	8.6	0.0	2.9	4	0	0	4	4	2	1	AAA	domain
Rad17	PF03215.15	gi|297621667|ref|YP_003709804.1|	-	0.0026	17.7	0.0	0.083	12.8	0.0	2.5	2	0	0	2	2	2	1	Rad17	P-loop	domain
AAA_33	PF13671.6	gi|297621667|ref|YP_003709804.1|	-	0.01	16.0	0.6	4.9	7.3	0.0	3.2	3	0	0	3	3	3	0	AAA	domain
AAA_14	PF13173.6	gi|297621667|ref|YP_003709804.1|	-	0.011	15.8	0.1	0.67	10.0	0.0	2.9	4	0	0	4	4	2	0	AAA	domain
ATPase_2	PF01637.18	gi|297621667|ref|YP_003709804.1|	-	0.012	15.5	2.1	0.74	9.7	0.1	2.6	3	0	0	3	3	2	0	ATPase	domain	predominantly	from	Archaea
MobB	PF03205.14	gi|297621667|ref|YP_003709804.1|	-	0.014	15.3	0.7	0.21	11.5	0.1	2.5	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Roc	PF08477.13	gi|297621667|ref|YP_003709804.1|	-	0.015	15.5	0.2	1.1	9.5	0.0	2.7	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
DLIC	PF05783.11	gi|297621667|ref|YP_003709804.1|	-	0.017	14.0	0.3	0.11	11.3	0.0	2.1	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
TsaE	PF02367.17	gi|297621667|ref|YP_003709804.1|	-	0.02	14.9	0.1	2.3	8.3	0.0	2.4	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Dynamin_N	PF00350.23	gi|297621667|ref|YP_003709804.1|	-	0.026	14.6	0.3	12	5.9	0.0	3.0	3	0	0	3	3	3	0	Dynamin	family
cobW	PF02492.19	gi|297621667|ref|YP_003709804.1|	-	0.036	13.7	1.8	1.8	8.1	0.1	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
dNK	PF01712.19	gi|297621667|ref|YP_003709804.1|	-	0.039	13.8	0.4	9.6	6.0	0.0	2.4	2	0	0	2	2	2	0	Deoxynucleoside	kinase
AAA_19	PF13245.6	gi|297621667|ref|YP_003709804.1|	-	0.041	14.2	0.3	2.8	8.3	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|297621667|ref|YP_003709804.1|	-	0.044	13.3	0.2	8.1	5.9	0.0	2.3	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
PduV-EutP	PF10662.9	gi|297621667|ref|YP_003709804.1|	-	0.086	12.6	2.2	5.2	6.8	0.1	3.1	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
FadA	PF09403.10	gi|297621667|ref|YP_003709804.1|	-	0.096	13.2	0.8	0.33	11.5	0.3	2.1	2	0	0	2	2	1	0	Adhesion	protein	FadA
RuvB_N	PF05496.12	gi|297621667|ref|YP_003709804.1|	-	0.13	11.9	0.1	18	5.1	0.0	2.5	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_5	PF07728.14	gi|297621667|ref|YP_003709804.1|	-	0.15	12.0	1.5	15	5.6	0.1	2.4	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
FeoB_N	PF02421.18	gi|297621667|ref|YP_003709804.1|	-	0.21	11.1	0.7	8.4	5.9	0.2	2.4	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
SRP54	PF00448.22	gi|297621667|ref|YP_003709804.1|	-	0.48	10.0	2.4	0.72	9.5	0.2	2.2	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
SpoU_methylase	PF00588.19	gi|297621668|ref|YP_003709805.1|	-	5.7e-28	97.9	0.0	8e-28	97.4	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
GTP_cyclohydroI	PF01227.22	gi|297621669|ref|YP_003709806.1|	-	2.3e-59	199.8	0.0	2.7e-59	199.6	0.0	1.0	1	0	0	1	1	1	1	GTP	cyclohydrolase	I
QueF	PF14489.6	gi|297621669|ref|YP_003709806.1|	-	0.0088	16.2	0.2	0.033	14.3	0.0	2.1	3	0	0	3	3	3	1	QueF-like	protein
Tim54	PF11711.8	gi|297621669|ref|YP_003709806.1|	-	0.17	10.6	0.0	0.19	10.5	0.0	1.2	1	0	0	1	1	1	0	Inner	membrane	protein	import	complex	subunit	Tim54
AA_kinase	PF00696.28	gi|297621670|ref|YP_003709807.1|	-	2.1e-43	148.7	2.7	2.7e-43	148.3	2.7	1.2	1	0	0	1	1	1	1	Amino	acid	kinase	family
PUA	PF01472.20	gi|297621670|ref|YP_003709807.1|	-	7.6e-19	67.4	0.2	1.8e-18	66.3	0.2	1.7	1	0	0	1	1	1	1	PUA	domain
PUA_3	PF17785.1	gi|297621670|ref|YP_003709807.1|	-	0.0028	17.4	0.0	0.0085	15.9	0.0	1.8	1	0	0	1	1	1	1	PUA-like	domain
DUF3290	PF11694.8	gi|297621670|ref|YP_003709807.1|	-	0.028	14.4	0.3	8	6.4	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3290)
Aldedh	PF00171.22	gi|297621671|ref|YP_003709808.1|	-	7e-19	67.7	0.1	4.8e-13	48.4	0.0	2.1	1	1	1	2	2	2	2	Aldehyde	dehydrogenase	family
Filament	PF00038.21	gi|297621671|ref|YP_003709808.1|	-	0.02	14.5	1.6	0.034	13.7	1.6	1.3	1	0	0	1	1	1	0	Intermediate	filament	protein
DUF1487	PF07368.11	gi|297621671|ref|YP_003709808.1|	-	0.033	13.6	0.1	0.06	12.8	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1487)
P5CR_dimer	PF14748.6	gi|297621672|ref|YP_003709809.1|	-	1.1e-28	99.5	0.4	2.2e-28	98.5	0.1	1.6	2	0	0	2	2	2	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.17	gi|297621672|ref|YP_003709809.1|	-	2e-18	66.8	0.1	4.2e-18	65.7	0.1	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|297621672|ref|YP_003709809.1|	-	4.1e-08	33.5	0.0	6.6e-08	32.9	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Shikimate_DH	PF01488.20	gi|297621672|ref|YP_003709809.1|	-	6.2e-06	26.3	0.0	1e-05	25.6	0.0	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|297621672|ref|YP_003709809.1|	-	2.8e-05	24.4	0.1	5.2e-05	23.5	0.1	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
GFO_IDH_MocA	PF01408.22	gi|297621672|ref|YP_003709809.1|	-	5.8e-05	23.9	0.0	0.0013	19.5	0.1	2.2	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
TrkA_N	PF02254.18	gi|297621672|ref|YP_003709809.1|	-	0.00014	22.1	0.1	0.0014	18.9	0.0	2.2	1	1	1	2	2	2	1	TrkA-N	domain
NAD_Gly3P_dh_N	PF01210.23	gi|297621672|ref|YP_003709809.1|	-	0.0005	20.1	0.1	0.0053	16.7	0.1	2.2	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
PDH	PF02153.17	gi|297621672|ref|YP_003709809.1|	-	0.00065	18.8	0.0	0.00095	18.2	0.0	1.2	1	0	0	1	1	1	1	Prephenate	dehydrogenase
ApbA	PF02558.16	gi|297621672|ref|YP_003709809.1|	-	0.00075	19.2	0.6	0.012	15.3	0.5	2.5	1	1	1	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
DapB_N	PF01113.20	gi|297621672|ref|YP_003709809.1|	-	0.057	13.6	0.0	0.11	12.6	0.0	1.5	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
Ferrochelatase	PF00762.19	gi|297621673|ref|YP_003709810.1|	-	1.8e-93	313.1	0.0	3.3e-93	312.2	0.0	1.4	1	1	0	1	1	1	1	Ferrochelatase
CbiX	PF01903.17	gi|297621673|ref|YP_003709810.1|	-	0.0015	18.9	0.0	0.48	10.8	0.0	2.6	2	1	1	3	3	3	2	CbiX
zf-RING_7	PF02591.15	gi|297621674|ref|YP_003709811.1|	-	1.4e-09	38.0	4.3	4.7e-09	36.3	4.3	2.0	1	0	0	1	1	1	1	C4-type	zinc	ribbon	domain
ATG16	PF08614.11	gi|297621674|ref|YP_003709811.1|	-	7.9e-05	23.0	23.1	0.0012	19.1	11.3	2.2	1	1	1	2	2	2	2	Autophagy	protein	16	(ATG16)
Lebercilin	PF15619.6	gi|297621674|ref|YP_003709811.1|	-	0.0006	19.5	21.3	0.00091	18.9	21.3	1.2	1	0	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
Jnk-SapK_ap_N	PF09744.9	gi|297621674|ref|YP_003709811.1|	-	0.13	12.4	21.9	1.3	9.3	5.4	2.2	1	1	1	2	2	2	0	JNK_SAPK-associated	protein-1
DUF1664	PF07889.12	gi|297621674|ref|YP_003709811.1|	-	0.16	12.0	15.4	1	9.4	2.8	2.3	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF948	PF06103.11	gi|297621674|ref|YP_003709811.1|	-	0.17	12.2	8.4	2	8.7	1.5	3.0	2	1	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
SKA2	PF16740.5	gi|297621674|ref|YP_003709811.1|	-	0.2	11.5	8.5	0.42	10.4	0.3	2.9	1	1	1	2	2	2	0	Spindle	and	kinetochore-associated	protein	2
Lys-AminoMut_A	PF09043.11	gi|297621674|ref|YP_003709811.1|	-	0.53	8.7	7.0	0.31	9.5	3.2	1.9	1	1	1	2	2	2	0	D-Lysine	5,6-aminomutase	TIM-barrel	domain	of	alpha	subunit
DUF4600	PF15372.6	gi|297621674|ref|YP_003709811.1|	-	1.2	9.6	18.3	2.1	8.8	12.8	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4600)
COG5	PF10392.9	gi|297621674|ref|YP_003709811.1|	-	1.3	9.2	11.8	1.4	9.1	2.3	2.2	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
TEX13	PF15186.6	gi|297621674|ref|YP_003709811.1|	-	1.5	8.5	12.6	0.77	9.4	8.2	2.1	1	1	1	2	2	2	0	Testis-expressed	sequence	13	protein	family
Fez1	PF06818.15	gi|297621674|ref|YP_003709811.1|	-	1.5	9.2	19.3	3.3	8.1	19.1	1.8	1	1	0	1	1	1	0	Fez1
YabA	PF06156.13	gi|297621674|ref|YP_003709811.1|	-	1.7	9.4	15.5	0.67	10.6	3.3	2.9	1	1	1	2	2	2	0	Initiation	control	protein	YabA
HAUS-augmin3	PF14932.6	gi|297621674|ref|YP_003709811.1|	-	1.8	8.1	16.7	0.51	9.9	12.8	1.8	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
FlxA	PF14282.6	gi|297621674|ref|YP_003709811.1|	-	3	7.9	17.6	0.44	10.6	6.5	2.5	1	1	1	2	2	2	0	FlxA-like	protein
Spc7	PF08317.11	gi|297621674|ref|YP_003709811.1|	-	4	6.2	22.1	2.8	6.7	19.6	1.9	1	1	0	1	1	1	0	Spc7	kinetochore	protein
CC2-LZ	PF16516.5	gi|297621674|ref|YP_003709811.1|	-	4.7	7.6	16.5	3.3	8.1	8.7	3.4	1	1	2	3	3	3	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
DUF3450	PF11932.8	gi|297621674|ref|YP_003709811.1|	-	4.8	6.4	19.0	1.1	8.5	8.9	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
DUF16	PF01519.16	gi|297621674|ref|YP_003709811.1|	-	5.2	7.6	18.8	4.7	7.8	4.9	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
Fib_alpha	PF08702.10	gi|297621674|ref|YP_003709811.1|	-	6.7	6.9	23.6	0.046	13.9	5.1	2.6	2	1	1	3	3	3	0	Fibrinogen	alpha/beta	chain	family
NPV_P10	PF05531.12	gi|297621674|ref|YP_003709811.1|	-	6.8	7.2	8.6	7.1	7.2	0.2	3.2	1	1	2	3	3	3	0	Nucleopolyhedrovirus	P10	protein
AAA_13	PF13166.6	gi|297621674|ref|YP_003709811.1|	-	7	5.2	20.1	4.3	5.9	8.3	1.9	1	1	1	2	2	2	0	AAA	domain
APG6_N	PF17675.1	gi|297621674|ref|YP_003709811.1|	-	9.7	6.7	22.9	2.4	8.7	15.5	2.5	1	1	1	2	2	2	0	Apg6	coiled-coil	region
SHMT	PF00464.19	gi|297621675|ref|YP_003709812.1|	-	1.1e-126	422.6	2.4	2.1e-96	323.0	0.2	2.5	2	1	0	2	2	2	2	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.21	gi|297621675|ref|YP_003709812.1|	-	0.0001	21.6	0.0	0.00023	20.4	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|297621675|ref|YP_003709812.1|	-	0.00012	21.5	0.1	0.00098	18.5	0.1	2.0	1	1	0	1	1	1	1	Beta-eliminating	lyase
CLP_protease	PF00574.23	gi|297621676|ref|YP_003709813.1|	-	3.7e-67	225.8	0.1	4.4e-67	225.5	0.1	1.0	1	0	0	1	1	1	1	Clp	protease
ECH_1	PF00378.20	gi|297621676|ref|YP_003709813.1|	-	0.017	14.5	0.1	1.3	8.3	0.1	2.2	2	0	0	2	2	2	0	Enoyl-CoA	hydratase/isomerase
DAP_epimerase	PF01678.19	gi|297621677|ref|YP_003709814.1|	-	3.7e-44	149.8	0.0	4.8e-29	101.0	0.0	2.0	2	0	0	2	2	2	2	Diaminopimelate	epimerase
UPF0158	PF03682.13	gi|297621678|ref|YP_003709815.1|	-	3.1e-76	254.7	11.0	3.1e-76	254.7	11.0	1.8	2	1	1	3	3	3	1	Uncharacterised	protein	family	(UPF0158)
DUF2570	PF10828.8	gi|297621678|ref|YP_003709815.1|	-	0.14	12.0	1.3	0.46	10.3	1.3	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2570)
RF-1	PF00472.20	gi|297621679|ref|YP_003709816.1|	-	1.4e-22	79.8	8.6	2.2e-22	79.2	8.6	1.3	1	0	0	1	1	1	1	RF-1	domain
FBPase_glpX	PF03320.13	gi|297621679|ref|YP_003709816.1|	-	0.33	9.8	1.7	0.45	9.3	1.7	1.1	1	0	0	1	1	1	0	Bacterial	fructose-1,6-bisphosphatase,	glpX-encoded
PNISR	PF15996.5	gi|297621679|ref|YP_003709816.1|	-	0.82	9.9	15.4	1.2	9.3	15.4	1.2	1	0	0	1	1	1	0	Arginine/serine-rich	protein	PNISR
MFS_MOT1	PF16983.5	gi|297621680|ref|YP_003709817.1|	-	0.29	11.5	5.1	0.44	11.0	5.1	1.3	1	1	0	1	1	1	0	Molybdate	transporter	of	MFS	superfamily
SLC12	PF03522.15	gi|297621681|ref|YP_003709818.1|	-	0.14	11.2	0.0	0.14	11.2	0.0	1.0	1	0	0	1	1	1	0	Solute	carrier	family	12
MscL	PF01741.18	gi|297621682|ref|YP_003709819.1|	-	1.1e-38	132.3	1.9	1.2e-38	132.1	1.9	1.0	1	0	0	1	1	1	1	Large-conductance	mechanosensitive	channel,	MscL
DZR	PF12773.7	gi|297621682|ref|YP_003709819.1|	-	0.0066	16.4	3.0	0.01	15.8	3.0	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_15	PF17032.5	gi|297621682|ref|YP_003709819.1|	-	0.0078	16.9	1.2	0.011	16.5	1.2	1.3	1	0	0	1	1	1	1	zinc-ribbon	family
CTU2	PF10288.9	gi|297621682|ref|YP_003709819.1|	-	0.0087	16.3	2.0	0.014	15.6	2.0	1.3	1	0	0	1	1	1	1	Cytoplasmic	tRNA	2-thiolation	protein	2
TctA	PF01970.16	gi|297621682|ref|YP_003709819.1|	-	0.01	14.6	0.1	0.012	14.3	0.1	1.1	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctA	family
UPF0547	PF10571.9	gi|297621682|ref|YP_003709819.1|	-	0.022	14.8	6.6	0.038	14.1	6.6	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_2	PF13240.6	gi|297621682|ref|YP_003709819.1|	-	0.049	13.4	3.3	0.078	12.7	3.3	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
eIF3_subunit	PF08597.10	gi|297621682|ref|YP_003709819.1|	-	0.12	12.3	0.1	0.16	11.9	0.1	1.1	1	0	0	1	1	1	0	Translation	initiation	factor	eIF3	subunit
zf-ribbon_3	PF13248.6	gi|297621682|ref|YP_003709819.1|	-	0.14	11.6	2.3	0.21	11.0	2.3	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
Aminotran_5	PF00266.19	gi|297621683|ref|YP_003709820.1|	-	3.8e-43	147.8	0.0	4.4e-43	147.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
PALP	PF00291.25	gi|297621684|ref|YP_003709821.1|	-	1.2e-72	244.9	0.0	1.3e-72	244.7	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
DUF2334	PF10096.9	gi|297621684|ref|YP_003709821.1|	-	0.073	12.7	0.0	0.11	12.1	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2334)
TauD	PF02668.16	gi|297621685|ref|YP_003709822.1|	-	1.4e-41	143.1	0.1	1.8e-41	142.7	0.1	1.1	1	0	0	1	1	1	1	Taurine	catabolism	dioxygenase	TauD,	TfdA	family
adh_short	PF00106.25	gi|297621686|ref|YP_003709823.1|	-	6e-39	133.5	0.0	8.3e-39	133.1	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|297621686|ref|YP_003709823.1|	-	7.9e-32	110.7	0.0	1.6e-31	109.7	0.0	1.5	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.10	gi|297621686|ref|YP_003709823.1|	-	2.6e-08	34.0	0.0	3.9e-08	33.4	0.0	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|297621686|ref|YP_003709823.1|	-	0.0096	15.4	0.1	0.014	14.8	0.1	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
ATP_bind_2	PF03668.15	gi|297621686|ref|YP_003709823.1|	-	0.015	14.6	0.0	0.021	14.1	0.0	1.2	1	0	0	1	1	1	0	P-loop	ATPase	protein	family
NAD_binding_2	PF03446.15	gi|297621686|ref|YP_003709823.1|	-	0.016	15.3	0.0	0.032	14.4	0.0	1.4	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|297621686|ref|YP_003709823.1|	-	0.061	13.6	0.5	0.13	12.5	0.5	1.8	1	1	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
HlyD_3	PF13437.6	gi|297621686|ref|YP_003709823.1|	-	0.14	12.9	0.0	0.24	12.1	0.0	1.3	1	0	0	1	1	1	0	HlyD	family	secretion	protein
MatE	PF01554.18	gi|297621687|ref|YP_003709824.1|	-	2.1e-28	99.0	33.4	1.9e-14	53.6	11.1	3.3	3	1	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|297621687|ref|YP_003709824.1|	-	1.8e-06	28.1	14.5	1.8e-06	28.1	14.5	4.5	3	2	1	4	4	4	1	Polysaccharide	biosynthesis	C-terminal	domain
SieB	PF14163.6	gi|297621687|ref|YP_003709824.1|	-	0.00019	21.0	2.3	0.011	15.3	0.0	2.5	2	0	0	2	2	2	2	Super-infection	exclusion	protein	B
Thiolase_C	PF02803.18	gi|297621689|ref|YP_003709826.1|	-	6.6e-12	45.2	0.9	1.9e-11	43.7	0.0	1.9	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.23	gi|297621689|ref|YP_003709826.1|	-	8.6e-09	35.1	0.1	1.8e-07	30.8	0.0	2.2	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.26	gi|297621689|ref|YP_003709826.1|	-	3.2e-05	23.6	1.6	0.00015	21.4	0.7	2.3	2	1	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
3HCDH_N	PF02737.18	gi|297621690|ref|YP_003709827.1|	-	8.8e-35	120.2	0.8	4.6e-32	111.3	0.0	2.3	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.22	gi|297621690|ref|YP_003709827.1|	-	3.3e-09	37.2	0.1	1.6e-08	35.1	0.1	2.2	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
DUF5105	PF17118.5	gi|297621690|ref|YP_003709827.1|	-	0.12	12.2	0.3	0.21	11.4	0.3	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5105)
ECH_1	PF00378.20	gi|297621691|ref|YP_003709828.1|	-	1.9e-62	210.8	0.7	2.4e-62	210.5	0.7	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
ECH_2	PF16113.5	gi|297621691|ref|YP_003709828.1|	-	3.9e-29	102.2	0.3	4.8e-29	101.9	0.3	1.1	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
ANTAR	PF03861.14	gi|297621691|ref|YP_003709828.1|	-	0.095	12.6	0.8	2.1	8.3	0.3	2.4	2	0	0	2	2	2	0	ANTAR	domain
PEP_mutase	PF13714.6	gi|297621692|ref|YP_003709829.1|	-	1.5e-45	155.5	0.0	1.9e-45	155.2	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ICL	PF00463.21	gi|297621692|ref|YP_003709829.1|	-	1.9e-09	36.5	0.0	2.9e-09	36.0	0.0	1.2	1	0	0	1	1	1	1	Isocitrate	lyase	family
FTCD	PF02971.14	gi|297621692|ref|YP_003709829.1|	-	0.088	12.8	0.0	2.7	8.0	0.0	2.6	2	1	0	2	2	2	0	Formiminotransferase	domain
Citrate_synt	PF00285.21	gi|297621693|ref|YP_003709830.1|	-	1.5e-113	379.6	0.0	1.7e-113	379.4	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase,	C-terminal	domain
MmgE_PrpD	PF03972.14	gi|297621694|ref|YP_003709831.1|	-	2e-140	468.3	0.0	2.4e-140	468.0	0.0	1.0	1	0	0	1	1	1	1	MmgE/PrpD	family
MFS_1	PF07690.16	gi|297621695|ref|YP_003709832.1|	-	3.1e-56	190.8	44.6	3.1e-56	190.8	44.6	1.6	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|297621695|ref|YP_003709832.1|	-	7.4e-08	31.2	7.2	7.4e-08	31.2	7.2	2.4	2	0	0	2	2	2	1	Transmembrane	secretion	effector
RE_HindVP	PF09519.10	gi|297621695|ref|YP_003709832.1|	-	0.12	11.4	0.1	0.18	10.8	0.1	1.1	1	0	0	1	1	1	0	HindVP	restriction	endonuclease
DUF485	PF04341.12	gi|297621695|ref|YP_003709832.1|	-	0.18	11.8	0.1	0.18	11.8	0.1	5.2	4	3	2	7	7	7	0	Protein	of	unknown	function,	DUF485
Colicin	PF01024.19	gi|297621695|ref|YP_003709832.1|	-	0.56	10.1	2.0	1.4	8.7	2.0	1.7	1	0	0	1	1	1	0	Colicin	pore	forming	domain
ECSCR	PF15820.5	gi|297621695|ref|YP_003709832.1|	-	0.64	9.9	3.5	4.2	7.2	0.0	3.3	3	0	0	3	3	3	0	Endothelial	cell-specific	chemotaxis	regulator
Gp_dh_C	PF02800.20	gi|297621697|ref|YP_003709834.1|	-	1.3e-66	223.0	0.0	1.9e-66	222.5	0.0	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Gp_dh_N	PF00044.24	gi|297621697|ref|YP_003709834.1|	-	2e-37	127.6	0.0	3.5e-37	126.8	0.0	1.4	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.20	gi|297621697|ref|YP_003709834.1|	-	0.01	16.0	0.0	0.039	14.1	0.0	2.1	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
Ribosomal_L17	PF01196.19	gi|297621698|ref|YP_003709835.1|	-	1.6e-32	112.2	0.2	2e-32	111.9	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L17
SMRP1	PF15181.6	gi|297621698|ref|YP_003709835.1|	-	0.12	12.0	0.1	0.18	11.3	0.1	1.3	1	0	0	1	1	1	0	Spermatid-specific	manchette-related	protein	1
RNA_pol_A_CTD	PF03118.15	gi|297621699|ref|YP_003709836.1|	-	8.6e-25	86.3	1.0	2.3e-24	84.9	1.0	1.7	1	0	0	1	1	1	1	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
RNA_pol_L	PF01193.24	gi|297621699|ref|YP_003709836.1|	-	2.2e-16	59.0	0.0	3.9e-16	58.2	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_A_bac	PF01000.26	gi|297621699|ref|YP_003709836.1|	-	4.2e-08	33.5	0.1	9.7e-08	32.4	0.1	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
Ribosomal_S11	PF00411.19	gi|297621700|ref|YP_003709837.1|	-	4.8e-43	146.1	2.8	6.5e-43	145.6	2.8	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S11
Ribosomal_S13	PF00416.22	gi|297621701|ref|YP_003709838.1|	-	2.4e-34	118.5	3.5	5.6e-33	114.1	3.5	2.0	1	1	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.11	gi|297621701|ref|YP_003709838.1|	-	0.014	14.2	0.0	0.017	13.9	0.0	1.2	1	0	0	1	1	1	0	Fibronectin-binding	protein	A	N-terminus	(FbpA)
H2TH	PF06831.14	gi|297621701|ref|YP_003709838.1|	-	0.018	15.0	0.0	0.029	14.4	0.0	1.3	1	0	0	1	1	1	0	Formamidopyrimidine-DNA	glycosylase	H2TH	domain
SecY	PF00344.20	gi|297621702|ref|YP_003709839.1|	-	4.4e-106	354.6	28.9	6.4e-106	354.0	28.9	1.2	1	0	0	1	1	1	1	SecY	translocase
Ribosomal_L27A	PF00828.19	gi|297621703|ref|YP_003709840.1|	-	1e-29	103.8	0.8	1.3e-29	103.4	0.8	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
Ribosomal_S5_C	PF03719.15	gi|297621704|ref|YP_003709841.1|	-	2.2e-28	97.5	0.0	3.8e-28	96.7	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.20	gi|297621704|ref|YP_003709841.1|	-	4.7e-24	84.1	0.3	7.5e-24	83.5	0.3	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_L18p	PF00861.22	gi|297621705|ref|YP_003709842.1|	-	3.5e-42	143.4	3.5	4e-42	143.3	3.5	1.0	1	0	0	1	1	1	1	Ribosomal	L18	of	archaea,	bacteria,	mitoch.	and	chloroplast
Ribosomal_L6	PF00347.23	gi|297621706|ref|YP_003709843.1|	-	3.3e-30	104.6	5.9	1.6e-16	60.7	0.1	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
Ribosomal_S8	PF00410.19	gi|297621707|ref|YP_003709844.1|	-	3.5e-44	149.8	0.0	3.8e-44	149.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8
DUF956	PF06115.11	gi|297621707|ref|YP_003709844.1|	-	0.084	12.6	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF956)
Ribosomal_L5_C	PF00673.21	gi|297621708|ref|YP_003709845.1|	-	7.6e-33	112.6	0.0	1.2e-32	111.9	0.0	1.3	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.19	gi|297621708|ref|YP_003709845.1|	-	1.1e-23	83.3	0.6	1.8e-23	82.6	0.6	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L5
ribosomal_L24	PF17136.4	gi|297621709|ref|YP_003709846.1|	-	5.5e-16	58.7	1.1	5.5e-16	58.7	1.1	1.9	2	0	0	2	2	2	1	Ribosomal	proteins	50S	L24/mitochondrial	39S	L24
KOW	PF00467.29	gi|297621709|ref|YP_003709846.1|	-	0.0002	21.2	2.0	0.0002	21.2	2.0	1.8	2	0	0	2	2	2	1	KOW	motif
YajC	PF02699.15	gi|297621709|ref|YP_003709846.1|	-	0.079	12.9	3.1	0.18	11.7	3.1	1.6	1	0	0	1	1	1	0	Preprotein	translocase	subunit
MazE_antitoxin	PF04014.18	gi|297621709|ref|YP_003709846.1|	-	0.089	12.8	0.2	3.2	7.8	0.0	2.4	2	0	0	2	2	2	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
Ribosomal_L14	PF00238.19	gi|297621710|ref|YP_003709847.1|	-	1.5e-52	176.8	0.4	1.7e-52	176.7	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
Peptidase_S24	PF00717.23	gi|297621710|ref|YP_003709847.1|	-	0.18	11.8	1.0	0.59	10.1	1.0	1.9	1	1	0	1	1	1	0	Peptidase	S24-like
Ribosomal_S17	PF00366.20	gi|297621711|ref|YP_003709848.1|	-	5.9e-31	106.4	2.8	7.4e-31	106.1	2.8	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_L29	PF00831.23	gi|297621712|ref|YP_003709849.1|	-	3.4e-14	52.5	9.9	3.9e-14	52.4	9.9	1.0	1	0	0	1	1	1	1	Ribosomal	L29	protein
NDK	PF00334.19	gi|297621712|ref|YP_003709849.1|	-	0.039	14.0	1.3	0.043	13.8	1.3	1.1	1	0	0	1	1	1	0	Nucleoside	diphosphate	kinase
Ribosomal_L16	PF00252.18	gi|297621713|ref|YP_003709850.1|	-	5.6e-48	162.3	1.2	6.3e-48	162.1	1.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
Ribosomal_S3_C	PF00189.20	gi|297621714|ref|YP_003709851.1|	-	9.7e-39	131.8	0.3	1.8e-38	130.9	0.3	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.17	gi|297621714|ref|YP_003709851.1|	-	6.1e-16	58.0	3.1	1.2e-15	57.1	3.1	1.5	1	0	0	1	1	1	1	KH	domain
KH_4	PF13083.6	gi|297621714|ref|YP_003709851.1|	-	0.00013	21.7	0.2	0.00025	20.9	0.2	1.5	1	0	0	1	1	1	1	KH	domain
Ribosomal_L22	PF00237.19	gi|297621715|ref|YP_003709852.1|	-	1.1e-26	93.0	0.1	1.3e-26	92.8	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S19	PF00203.21	gi|297621716|ref|YP_003709853.1|	-	4.2e-36	122.7	0.5	4.7e-36	122.5	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19
Ribosomal_L2_C	PF03947.18	gi|297621717|ref|YP_003709854.1|	-	8.6e-50	168.2	2.5	1.5e-49	167.3	2.5	1.4	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.23	gi|297621717|ref|YP_003709854.1|	-	5.2e-33	112.9	0.8	1.3e-32	111.6	0.7	1.8	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.20	gi|297621718|ref|YP_003709855.1|	-	3.1e-24	85.1	4.6	4e-24	84.8	4.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L23
RTT107_BRCT_6	PF16771.5	gi|297621718|ref|YP_003709855.1|	-	0.00073	19.7	3.0	0.001	19.2	3.0	1.2	1	0	0	1	1	1	1	Regulator	of	Ty1	transposition	protein	107	BRCT	domain
DUF4359	PF14271.6	gi|297621718|ref|YP_003709855.1|	-	0.023	15.4	0.1	0.025	15.3	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4359)
Ribosomal_S2	PF00318.20	gi|297621718|ref|YP_003709855.1|	-	0.03	13.6	1.2	0.036	13.3	1.2	1.2	1	0	0	1	1	1	0	Ribosomal	protein	S2
DUF1829	PF08862.10	gi|297621718|ref|YP_003709855.1|	-	0.046	14.2	2.1	0.061	13.8	2.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF1829
Ribosomal_L4	PF00573.22	gi|297621719|ref|YP_003709856.1|	-	1.4e-50	171.6	3.8	1.8e-50	171.3	3.8	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L3	PF00297.22	gi|297621720|ref|YP_003709857.1|	-	4.6e-17	62.1	6.0	2.2e-11	43.4	0.2	3.1	2	1	1	3	3	3	3	Ribosomal	protein	L3
SLBB	PF10531.9	gi|297621721|ref|YP_003709858.1|	-	3.5e-07	30.0	0.1	5.7e-07	29.3	0.1	1.4	1	0	0	1	1	1	1	SLBB	domain
TNFR_16_TM	PF18422.1	gi|297621721|ref|YP_003709858.1|	-	0.016	15.2	0.8	0.022	14.7	0.8	1.2	1	0	0	1	1	1	0	Tumor	necrosis	factor	receptor	member	16	trans-membrane	domain
cwf21	PF08312.12	gi|297621722|ref|YP_003709859.1|	-	0.12	12.6	0.3	0.34	11.1	0.3	1.7	1	0	0	1	1	1	0	cwf21	domain
Exonuc_VII_L	PF02601.15	gi|297621722|ref|YP_003709859.1|	-	0.93	9.0	4.5	0.78	9.3	3.0	1.5	2	0	0	2	2	2	0	Exonuclease	VII,	large	subunit
Atg14	PF10186.9	gi|297621722|ref|YP_003709859.1|	-	1.7	7.7	7.7	2.8	6.9	7.7	1.4	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Formyl_trans_N	PF00551.19	gi|297621725|ref|YP_003709862.1|	-	5.1e-42	143.7	0.0	6.4e-42	143.3	0.0	1.1	1	0	0	1	1	1	1	Formyl	transferase
Formyl_trans_C	PF02911.18	gi|297621725|ref|YP_003709862.1|	-	1.2e-23	83.2	0.0	2.1e-23	82.5	0.0	1.4	1	0	0	1	1	1	1	Formyl	transferase,	C-terminal	domain
Oxidored_nitro	PF00148.19	gi|297621725|ref|YP_003709862.1|	-	0.081	11.6	0.0	0.12	11.1	0.0	1.2	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
ACT	PF01842.25	gi|297621725|ref|YP_003709862.1|	-	0.11	12.3	0.0	0.3	10.9	0.0	1.7	1	0	0	1	1	1	0	ACT	domain
Hexapep	PF00132.24	gi|297621726|ref|YP_003709863.1|	-	3.5e-26	89.9	19.0	1.5e-09	37.2	2.0	6.4	3	2	3	7	7	7	7	Bacterial	transferase	hexapeptide	(six	repeats)
Acetyltransf_11	PF13720.6	gi|297621726|ref|YP_003709863.1|	-	6.5e-24	84.2	0.0	1.3e-23	83.3	0.0	1.5	1	0	0	1	1	1	1	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
Hexapep_2	PF14602.6	gi|297621726|ref|YP_003709863.1|	-	0.00041	20.1	15.0	0.13	12.0	0.1	5.2	3	2	2	5	5	5	4	Hexapeptide	repeat	of	succinyl-transferase
Bactofilin	PF04519.13	gi|297621726|ref|YP_003709863.1|	-	0.0073	16.6	1.9	0.2	11.9	0.2	2.5	2	0	0	2	2	2	1	Polymer-forming	cytoskeletal
Fucokinase	PF07959.12	gi|297621726|ref|YP_003709863.1|	-	0.28	10.1	1.1	1	8.2	0.5	1.9	1	1	1	2	2	2	0	L-fucokinase
FabA	PF07977.13	gi|297621727|ref|YP_003709864.1|	-	2.2e-30	105.1	0.0	2.6e-30	104.8	0.0	1.1	1	0	0	1	1	1	1	FabA-like	domain
MaoC_dehydratas	PF01575.19	gi|297621727|ref|YP_003709864.1|	-	0.059	12.9	0.0	0.079	12.5	0.0	1.2	1	0	0	1	1	1	0	MaoC	like	domain
4HBT	PF03061.22	gi|297621727|ref|YP_003709864.1|	-	0.065	13.6	0.0	0.091	13.1	0.0	1.2	1	0	0	1	1	1	0	Thioesterase	superfamily
LpxC	PF03331.13	gi|297621728|ref|YP_003709865.1|	-	2.6e-89	299.3	0.0	3e-89	299.1	0.0	1.0	1	0	0	1	1	1	1	UDP-3-O-acyl	N-acetylglycosamine	deacetylase
CN_hydrolase	PF00795.22	gi|297621729|ref|YP_003709866.1|	-	2.9e-26	92.4	0.0	5.1e-26	91.6	0.0	1.3	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
TruB_C	PF09142.11	gi|297621729|ref|YP_003709866.1|	-	0.0061	16.3	0.1	0.014	15.2	0.1	1.5	1	0	0	1	1	1	1	tRNA	Pseudouridine	synthase	II,	C	terminal
CesT	PF05932.13	gi|297621730|ref|YP_003709867.1|	-	1.5e-11	44.4	0.1	1.8e-11	44.2	0.1	1.1	1	0	0	1	1	1	1	Tir	chaperone	protein	(CesT)	family
Herpes_BTRF1	PF04682.12	gi|297621730|ref|YP_003709867.1|	-	0.0085	15.5	0.5	1.7	7.9	0.5	2.0	2	0	0	2	2	2	2	Herpesvirus	BTRF1	protein	conserved	region
DUF294_C	PF10335.9	gi|297621731|ref|YP_003709868.1|	-	7.8e-13	48.4	0.2	1.8e-12	47.3	0.1	1.5	2	0	0	2	2	2	1	Putative	nucleotidyltransferase	substrate	binding	domain
DUF294	PF03445.13	gi|297621731|ref|YP_003709868.1|	-	9.6e-09	35.2	0.0	2.1e-08	34.1	0.0	1.5	1	0	0	1	1	1	1	Putative	nucleotidyltransferase	DUF294
GlnE	PF03710.15	gi|297621731|ref|YP_003709868.1|	-	0.0017	17.8	0.0	0.0036	16.8	0.0	1.4	1	0	0	1	1	1	1	Glutamate-ammonia	ligase	adenylyltransferase
GTSE1_N	PF15259.6	gi|297621731|ref|YP_003709868.1|	-	0.015	15.5	0.7	0.089	13.0	0.1	2.1	2	0	0	2	2	2	0	G-2	and	S-phase	expressed	1
DUF29	PF01724.16	gi|297621731|ref|YP_003709868.1|	-	0.025	14.8	0.6	0.3	11.3	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF29
Polbeta	PF18765.1	gi|297621731|ref|YP_003709868.1|	-	0.026	14.6	0.0	0.08	13.0	0.0	1.7	1	0	0	1	1	1	0	Polymerase	beta,	Nucleotidyltransferase
NTP_transf_2	PF01909.23	gi|297621731|ref|YP_003709868.1|	-	0.035	14.4	0.0	0.084	13.2	0.0	1.6	1	0	0	1	1	1	0	Nucleotidyltransferase	domain
TFIIA_gamma_N	PF02268.16	gi|297621731|ref|YP_003709868.1|	-	0.099	12.7	0.1	0.47	10.5	0.0	2.1	2	0	0	2	2	2	0	Transcription	initiation	factor	IIA,	gamma	subunit,	helical	domain
Exo_endo_phos	PF03372.23	gi|297621732|ref|YP_003709869.1|	-	0.098	12.2	0.0	0.1	12.1	0.0	1.3	1	1	0	1	1	1	0	Endonuclease/Exonuclease/phosphatase	family
Methyltr_RsmB-F	PF01189.17	gi|297621733|ref|YP_003709870.1|	-	4.2e-38	131.0	0.0	4.6e-37	127.6	0.0	2.2	1	1	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_31	PF13847.6	gi|297621733|ref|YP_003709870.1|	-	3.8e-12	46.3	0.0	6.3e-12	45.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|297621733|ref|YP_003709870.1|	-	8.9e-09	35.0	0.0	1.7e-08	34.1	0.0	1.5	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.14	gi|297621733|ref|YP_003709870.1|	-	3.7e-06	26.6	0.0	8e-06	25.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|297621733|ref|YP_003709870.1|	-	8e-06	26.5	0.0	3.6e-05	24.4	0.0	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltr_RsmF_N	PF17125.5	gi|297621733|ref|YP_003709870.1|	-	1.1e-05	25.9	0.0	2.2e-05	24.9	0.0	1.6	1	0	0	1	1	1	1	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
PCMT	PF01135.19	gi|297621733|ref|YP_003709870.1|	-	0.00032	20.5	0.0	0.00053	19.8	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_15	PF09445.10	gi|297621733|ref|YP_003709870.1|	-	0.046	13.3	0.0	0.076	12.6	0.0	1.4	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_23	PF13489.6	gi|297621733|ref|YP_003709870.1|	-	0.049	13.5	0.1	1.2	9.0	0.0	2.6	2	1	0	2	2	2	0	Methyltransferase	domain
FtsJ	PF01728.19	gi|297621733|ref|YP_003709870.1|	-	0.095	12.8	0.0	0.16	12.1	0.0	1.3	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
Methyltransf_3	PF01596.17	gi|297621733|ref|YP_003709870.1|	-	0.19	10.9	0.0	0.45	9.6	0.0	1.6	2	0	0	2	2	2	0	O-methyltransferase
SurA_N_3	PF13624.6	gi|297621734|ref|YP_003709871.1|	-	5.3e-09	36.1	0.8	9.1e-09	35.3	0.1	1.7	2	0	0	2	2	2	1	SurA	N-terminal	domain
SurA_N_2	PF13623.6	gi|297621734|ref|YP_003709871.1|	-	1.9e-07	31.1	0.3	9e-07	28.9	0.1	2.0	2	0	0	2	2	2	1	SurA	N-terminal	domain
Rotamase_2	PF13145.6	gi|297621734|ref|YP_003709871.1|	-	0.0077	17.1	0.0	0.017	16.0	0.0	1.6	1	1	0	1	1	1	1	PPIC-type	PPIASE	domain
RPAP1_N	PF08621.10	gi|297621734|ref|YP_003709871.1|	-	0.018	14.8	0.0	11	5.9	0.0	3.0	3	0	0	3	3	3	0	RPAP1-like,	N-terminal
RrnaAD	PF00398.20	gi|297621735|ref|YP_003709872.1|	-	1.5e-53	181.6	0.0	2e-53	181.2	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.6	gi|297621735|ref|YP_003709872.1|	-	0.0016	19.1	0.0	0.0031	18.2	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|297621735|ref|YP_003709872.1|	-	0.0024	18.5	0.0	0.005	17.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|297621735|ref|YP_003709872.1|	-	0.0029	17.4	0.0	0.0057	16.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
TrkA_N	PF02254.18	gi|297621735|ref|YP_003709872.1|	-	0.026	14.8	0.1	0.043	14.1	0.1	1.3	1	0	0	1	1	1	0	TrkA-N	domain
NodS	PF05401.11	gi|297621735|ref|YP_003709872.1|	-	0.14	11.8	0.0	0.23	11.1	0.0	1.3	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
Peptidase_S11	PF00768.20	gi|297621737|ref|YP_003709874.1|	-	5e-47	160.4	0.8	8.8e-47	159.6	0.8	1.3	1	0	0	1	1	1	1	D-alanyl-D-alanine	carboxypeptidase
Beta-lactamase2	PF13354.6	gi|297621737|ref|YP_003709874.1|	-	3.4e-08	33.4	0.2	5.6e-08	32.6	0.2	1.4	1	0	0	1	1	1	1	Beta-lactamase	enzyme	family
PBP5_C	PF07943.13	gi|297621737|ref|YP_003709874.1|	-	0.0046	17.2	0.4	0.013	15.7	0.1	1.9	2	0	0	2	2	2	1	Penicillin-binding	protein	5,	C-terminal	domain
Peptidase_S13	PF02113.15	gi|297621737|ref|YP_003709874.1|	-	0.0047	15.7	0.0	0.0083	14.9	0.0	1.3	1	0	0	1	1	1	1	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
DNTTIP1_dimer	PF18192.1	gi|297621738|ref|YP_003709875.1|	-	0.031	14.6	0.3	0.069	13.5	0.1	1.7	2	0	0	2	2	2	0	DNTTIP1	dimerisation	domain
DUF4351	PF14261.6	gi|297621738|ref|YP_003709875.1|	-	0.089	12.9	0.5	0.19	11.8	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4351)
LptE	PF04390.12	gi|297621739|ref|YP_003709876.1|	-	4.8e-10	40.1	0.0	5.9e-10	39.8	0.0	1.1	1	0	0	1	1	1	1	Lipopolysaccharide-assembly
TPR_6	PF13174.6	gi|297621740|ref|YP_003709877.1|	-	2.2e-13	49.9	0.0	0.063	13.9	0.0	5.7	6	0	0	6	6	6	3	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297621740|ref|YP_003709877.1|	-	1.7e-10	40.2	1.3	0.39	10.9	0.0	5.6	6	0	0	6	6	6	3	Tetratricopeptide	repeat
YfiO	PF13525.6	gi|297621740|ref|YP_003709877.1|	-	6.2e-10	39.1	9.9	0.0004	20.2	0.2	3.1	2	1	1	3	3	3	3	Outer	membrane	lipoprotein
TPR_18	PF13512.6	gi|297621740|ref|YP_003709877.1|	-	1.1e-07	32.0	0.6	0.00053	20.1	0.1	2.6	2	1	0	3	3	3	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297621740|ref|YP_003709877.1|	-	1.3e-07	31.2	4.5	0.47	10.4	0.0	4.6	6	0	0	6	6	6	3	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|297621740|ref|YP_003709877.1|	-	1.8e-07	31.7	0.0	0.025	15.2	0.0	3.8	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621740|ref|YP_003709877.1|	-	9.7e-05	22.3	0.3	1.5	9.2	0.0	3.5	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297621740|ref|YP_003709877.1|	-	0.00011	22.4	1.0	0.31	11.3	0.0	3.6	3	1	0	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|297621740|ref|YP_003709877.1|	-	0.00014	22.4	0.2	0.95	10.5	0.0	3.7	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|297621740|ref|YP_003709877.1|	-	0.056	13.5	0.1	2.5	8.3	0.0	3.1	3	0	0	3	3	3	0	Tetratricopeptide	repeat
DNA_pol3_alpha	PF07733.12	gi|297621741|ref|YP_003709878.1|	-	2.4e-97	325.6	0.0	3.9e-97	324.9	0.0	1.3	1	0	0	1	1	1	1	Bacterial	DNA	polymerase	III	alpha	NTPase	domain
DNA_pol3_finger	PF17657.1	gi|297621741|ref|YP_003709878.1|	-	1.9e-62	209.5	0.1	3.5e-62	208.6	0.1	1.5	1	0	0	1	1	1	1	Bacterial	DNA	polymerase	III	alpha	subunit	finger	domain
PHP	PF02811.19	gi|297621741|ref|YP_003709878.1|	-	5e-51	173.3	0.0	1.6e-50	171.7	0.0	1.9	1	0	0	1	1	1	1	PHP	domain
HHH_6	PF14579.6	gi|297621741|ref|YP_003709878.1|	-	7.4e-24	83.8	0.0	4.2e-23	81.4	0.0	2.3	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|297621741|ref|YP_003709878.1|	-	0.00095	19.4	0.1	0.0035	17.6	0.1	2.0	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DUF1877	PF08974.10	gi|297621741|ref|YP_003709878.1|	-	0.032	14.3	0.1	0.16	12.0	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1877)
MFS_1	PF07690.16	gi|297621742|ref|YP_003709879.1|	-	3.1e-46	157.9	41.6	6.6e-46	156.8	35.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|297621742|ref|YP_003709879.1|	-	1.3e-05	24.2	30.0	0.0022	17.0	12.0	2.2	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
Yop-YscD_cpl	PF16697.5	gi|297621743|ref|YP_003709880.1|	-	0.00018	21.8	0.0	0.00053	20.2	0.0	1.8	1	0	0	1	1	1	1	Inner	membrane	component	of	T3SS,	cytoplasmic	domain
DUF5622	PF18533.1	gi|297621743|ref|YP_003709880.1|	-	0.1	12.8	0.2	0.29	11.3	0.2	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5622)
IZUMO	PF15005.6	gi|297621743|ref|YP_003709880.1|	-	0.12	12.9	1.7	0.38	11.3	1.7	2.0	1	0	0	1	1	1	0	Izumo	sperm-egg	fusion,	Ig	domain-associated
Phage_TAC_12	PF12363.8	gi|297621743|ref|YP_003709880.1|	-	0.16	12.4	0.2	0.16	12.4	0.2	1.9	2	0	0	2	2	2	0	Phage	tail	assembly	chaperone	protein,	TAC
tRNA-synt_His	PF13393.6	gi|297621744|ref|YP_003709881.1|	-	9e-43	146.7	0.0	1.5e-42	145.9	0.0	1.3	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.25	gi|297621744|ref|YP_003709881.1|	-	5.4e-20	72.1	0.0	9.9e-20	71.2	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|297621744|ref|YP_003709881.1|	-	4.4e-12	46.0	0.0	2.4e-11	43.6	0.0	2.2	2	0	0	2	2	2	1	Anticodon	binding	domain
tRNA-synt_2	PF00152.20	gi|297621744|ref|YP_003709881.1|	-	0.00012	21.3	1.9	1.9	7.5	0.2	3.2	3	0	0	3	3	3	3	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.20	gi|297621744|ref|YP_003709881.1|	-	0.0004	20.0	0.0	0.0065	16.0	0.0	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA_synthFbeta	PF17759.1	gi|297621744|ref|YP_003709881.1|	-	0.031	13.7	0.0	0.1	12.1	0.0	1.8	2	1	0	2	2	2	0	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
PGM_PMM_IV	PF00408.20	gi|297621744|ref|YP_003709881.1|	-	0.078	13.2	0.0	0.2	11.8	0.0	1.7	1	0	0	1	1	1	0	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
tRNA-synt_2	PF00152.20	gi|297621745|ref|YP_003709882.1|	-	3.9e-106	354.7	0.0	4.7e-106	354.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
GAD	PF02938.14	gi|297621745|ref|YP_003709882.1|	-	1.4e-25	89.3	0.2	4.3e-25	87.8	0.1	1.9	2	0	0	2	2	2	1	GAD	domain
tRNA_anti-codon	PF01336.25	gi|297621745|ref|YP_003709882.1|	-	5.5e-16	58.3	0.0	1.3e-15	57.1	0.0	1.7	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|297621745|ref|YP_003709882.1|	-	1.3e-05	24.9	0.0	0.056	12.9	0.0	3.2	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2b	PF00587.25	gi|297621745|ref|YP_003709882.1|	-	0.00025	21.1	0.0	0.00076	19.5	0.0	1.9	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
FKBP_C	PF00254.28	gi|297621747|ref|YP_003709884.1|	-	4.1e-21	75.1	0.0	8e-21	74.2	0.0	1.4	1	0	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
FKBP_N	PF01346.18	gi|297621747|ref|YP_003709884.1|	-	4.4e-13	50.0	0.0	1.3e-12	48.5	0.0	1.7	2	0	0	2	2	2	1	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
SpoU_methylase	PF00588.19	gi|297621748|ref|YP_003709885.1|	-	1.1e-30	106.7	0.0	1.2e-30	106.5	0.0	1.0	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Thioredoxin	PF00085.20	gi|297621749|ref|YP_003709886.1|	-	1e-30	105.7	0.0	1.2e-30	105.6	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|297621749|ref|YP_003709886.1|	-	1.1e-07	32.2	0.1	6.3e-06	26.6	0.1	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.6	gi|297621749|ref|YP_003709886.1|	-	4.8e-05	23.6	0.0	0.079	13.3	0.0	2.3	1	1	1	2	2	2	2	Thioredoxin-like
HyaE	PF07449.11	gi|297621749|ref|YP_003709886.1|	-	0.0003	20.7	0.0	0.00041	20.3	0.0	1.2	1	0	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_3	PF13192.6	gi|297621749|ref|YP_003709886.1|	-	0.00084	19.3	0.0	0.0011	19.0	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_9	PF14595.6	gi|297621749|ref|YP_003709886.1|	-	0.00094	19.0	0.0	0.0013	18.5	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
TraF	PF13728.6	gi|297621749|ref|YP_003709886.1|	-	0.0029	17.5	0.0	0.0037	17.1	0.0	1.2	1	0	0	1	1	1	1	F	plasmid	transfer	operon	protein
AhpC-TSA	PF00578.21	gi|297621749|ref|YP_003709886.1|	-	0.0029	17.5	0.0	0.0034	17.3	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
OST3_OST6	PF04756.13	gi|297621749|ref|YP_003709886.1|	-	0.0051	16.2	0.0	0.0051	16.2	0.0	1.1	1	0	0	1	1	1	1	OST3	/	OST6	family,	transporter	family
Redoxin	PF08534.10	gi|297621749|ref|YP_003709886.1|	-	0.01	15.6	0.1	0.17	11.6	0.0	2.0	1	1	1	2	2	2	0	Redoxin
Phosducin	PF02114.16	gi|297621749|ref|YP_003709886.1|	-	0.012	14.6	0.0	0.014	14.3	0.0	1.1	1	0	0	1	1	1	0	Phosducin
DIM1	PF02966.16	gi|297621749|ref|YP_003709886.1|	-	0.022	14.5	0.0	0.024	14.4	0.0	1.1	1	0	0	1	1	1	0	Mitosis	protein	DIM1
DUF953	PF06110.11	gi|297621749|ref|YP_003709886.1|	-	0.034	13.8	0.2	0.38	10.4	0.2	2.0	1	1	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF953)
Thioredoxin_5	PF13743.6	gi|297621749|ref|YP_003709886.1|	-	0.064	12.9	0.3	0.6	9.8	0.0	2.0	1	1	1	2	2	2	0	Thioredoxin
KH_2	PF07650.17	gi|297621749|ref|YP_003709886.1|	-	0.098	12.5	0.1	0.13	12.1	0.1	1.2	1	0	0	1	1	1	0	KH	domain
Thioredoxin_7	PF13899.6	gi|297621749|ref|YP_003709886.1|	-	0.11	12.6	0.0	0.18	12.0	0.0	1.5	1	1	0	1	1	1	0	Thioredoxin-like
PTPlike_phytase	PF14566.6	gi|297621750|ref|YP_003709887.1|	-	1.9e-27	96.3	0.2	6.9e-26	91.2	0.1	2.4	2	1	0	2	2	2	1	Inositol	hexakisphosphate
Y_phosphatase	PF00102.27	gi|297621750|ref|YP_003709887.1|	-	0.0023	17.6	0.4	0.0069	16.0	0.1	1.8	1	1	1	2	2	2	1	Protein-tyrosine	phosphatase
Y_phosphatase3	PF13350.6	gi|297621750|ref|YP_003709887.1|	-	0.0049	16.9	0.1	0.0085	16.1	0.1	1.5	1	1	0	1	1	1	1	Tyrosine	phosphatase	family
Rhodanese_C	PF12368.8	gi|297621751|ref|YP_003709888.1|	-	3.9e-17	62.4	9.3	8.7e-17	61.3	9.3	1.6	1	0	0	1	1	1	1	Rhodanase	C-terminal
UPF0176_N	PF17773.1	gi|297621751|ref|YP_003709888.1|	-	3.4e-16	59.4	0.1	1.7e-15	57.2	0.0	2.1	3	0	0	3	3	3	1	UPF0176	acylphosphatase	like	domain
Rhodanese	PF00581.20	gi|297621751|ref|YP_003709888.1|	-	1.2e-07	32.2	0.0	2.3e-07	31.3	0.0	1.5	1	0	0	1	1	1	1	Rhodanese-like	domain
DUF116	PF01976.17	gi|297621753|ref|YP_003709890.1|	-	0.13	11.7	0.1	0.2	11.2	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF116
3HCDH	PF00725.22	gi|297621757|ref|YP_003709894.1|	-	0.0013	19.3	0.0	0.0014	19.2	0.0	1.1	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
DUF3782	PF12644.7	gi|297621757|ref|YP_003709894.1|	-	0.0081	16.3	0.1	0.009	16.1	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3782)
Vac_Fusion	PF02346.16	gi|297621757|ref|YP_003709894.1|	-	0.013	15.1	0.3	0.02	14.5	0.3	1.3	1	0	0	1	1	1	0	Chordopoxvirus	multifunctional	envelope	protein	A27
DUF4250	PF14056.6	gi|297621757|ref|YP_003709894.1|	-	0.089	12.8	0.1	0.13	12.3	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4250)
DUF1335	PF07056.11	gi|297621757|ref|YP_003709894.1|	-	0.12	12.5	0.0	0.25	11.5	0.0	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1335)
DprA_WH	PF17782.1	gi|297621757|ref|YP_003709894.1|	-	0.15	12.2	0.0	0.21	11.7	0.0	1.2	1	0	0	1	1	1	0	DprA	winged	helix	domain
Sld3_N	PF18523.1	gi|297621758|ref|YP_003709895.1|	-	0.0047	17.0	0.3	0.18	12.0	0.0	2.2	1	1	1	2	2	2	2	Sld3	N-terminal	domain
DUF1464	PF07318.12	gi|297621759|ref|YP_003709896.1|	-	0.0096	15.1	0.0	0.014	14.6	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
MORN_2	PF07661.13	gi|297621759|ref|YP_003709896.1|	-	0.011	15.8	8.6	0.22	11.9	0.0	5.7	6	2	1	7	7	7	0	MORN	repeat	variant
MORN	PF02493.20	gi|297621759|ref|YP_003709896.1|	-	0.017	15.0	1.1	0.88	9.6	0.1	3.8	3	0	0	3	3	3	0	MORN	repeat
B3_4	PF03483.17	gi|297621760|ref|YP_003709897.1|	-	3e-66	222.4	0.0	5.6e-66	221.5	0.0	1.5	1	0	0	1	1	1	1	B3/4	domain
tRNA_synthFbeta	PF17759.1	gi|297621760|ref|YP_003709897.1|	-	1.6e-55	187.9	0.0	2.7e-55	187.1	0.0	1.4	1	0	0	1	1	1	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
tRNA_bind	PF01588.20	gi|297621760|ref|YP_003709897.1|	-	8.1e-22	77.1	0.1	1.8e-21	76.0	0.1	1.6	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
FDX-ACB	PF03147.14	gi|297621760|ref|YP_003709897.1|	-	9.2e-22	77.3	0.4	1.8e-21	76.3	0.4	1.5	1	0	0	1	1	1	1	Ferredoxin-fold	anticodon	binding	domain
B5	PF03484.15	gi|297621760|ref|YP_003709897.1|	-	3e-20	72.3	0.0	2.8e-18	66.0	0.0	2.9	2	0	0	2	2	2	1	tRNA	synthetase	B5	domain
NDK	PF00334.19	gi|297621761|ref|YP_003709898.1|	-	1.6e-58	196.5	0.0	1.8e-58	196.4	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
GATase	PF00117.28	gi|297621762|ref|YP_003709899.1|	-	1.3e-52	178.3	0.0	1.6e-52	178.1	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|297621762|ref|YP_003709899.1|	-	9.1e-12	45.2	0.1	1.7e-11	44.3	0.1	1.4	1	1	0	1	1	1	1	Peptidase	C26
SNO	PF01174.19	gi|297621762|ref|YP_003709899.1|	-	0.0081	16.0	0.3	0.053	13.4	0.1	2.2	2	1	0	2	2	2	1	SNO	glutamine	amidotransferase	family
NDK	PF00334.19	gi|297621763|ref|YP_003709900.1|	-	1.9e-55	186.5	0.5	2.2e-55	186.3	0.5	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
DDE_Tnp_IS1	PF03400.13	gi|297621764|ref|YP_003709901.1|	-	1e-11	45.3	0.1	2.8e-11	43.9	0.1	1.6	1	1	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.13	gi|297621764|ref|YP_003709901.1|	-	0.00071	19.3	2.7	0.0011	18.7	2.7	1.3	1	0	0	1	1	1	1	InsA	N-terminal	domain
DDE_Tnp_IS240	PF13610.6	gi|297621764|ref|YP_003709901.1|	-	0.00087	19.5	0.0	0.0015	18.8	0.0	1.5	1	0	0	1	1	1	1	DDE	domain
Zn-ribbon_8	PF09723.10	gi|297621764|ref|YP_003709901.1|	-	0.19	11.9	1.9	5.4	7.2	0.3	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|297621764|ref|YP_003709901.1|	-	0.43	11.3	5.4	0.7	10.6	0.7	2.8	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DDE_Tnp_IS1	PF03400.13	gi|297621765|ref|YP_003709902.1|	-	2.2e-07	31.2	0.1	2.3e-07	31.2	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.6	gi|297621765|ref|YP_003709902.1|	-	0.0018	18.0	0.1	0.0024	17.6	0.1	1.3	1	0	0	1	1	1	1	Integrase	core	domain
zf-SAP30	PF13866.6	gi|297621765|ref|YP_003709902.1|	-	0.035	14.2	1.5	0.15	12.2	1.5	1.9	1	1	0	1	1	1	0	SAP30	zinc-finger
ABC_tran	PF00005.27	gi|297621766|ref|YP_003709903.1|	-	2.6e-33	115.4	0.0	3.8e-33	114.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|297621766|ref|YP_003709903.1|	-	0.00011	22.2	2.5	0.16	11.7	0.3	2.1	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|297621766|ref|YP_003709903.1|	-	0.00025	20.5	0.3	0.0027	17.2	0.3	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SbcCD_C	PF13558.6	gi|297621766|ref|YP_003709903.1|	-	0.01	16.0	0.0	0.19	12.0	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
NB-ARC	PF00931.22	gi|297621766|ref|YP_003709903.1|	-	0.038	13.2	0.5	4.4	6.4	0.0	2.9	2	1	1	3	3	3	0	NB-ARC	domain
AAA_23	PF13476.6	gi|297621766|ref|YP_003709903.1|	-	0.11	13.0	0.0	0.11	13.0	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
OstA_2	PF13100.6	gi|297621767|ref|YP_003709904.1|	-	0.029	14.0	0.0	0.43	10.2	0.0	2.5	1	1	0	1	1	1	0	OstA-like	protein
Pertussis_S1	PF02917.14	gi|297621767|ref|YP_003709904.1|	-	0.085	12.6	0.1	0.15	11.8	0.1	1.3	1	0	0	1	1	1	0	Pertussis	toxin,	subunit	1
DAHP_synth_1	PF00793.20	gi|297621768|ref|YP_003709905.1|	-	1.9e-67	227.0	0.0	2.1e-67	226.9	0.0	1.0	1	0	0	1	1	1	1	DAHP	synthetase	I	family
HPPK	PF01288.20	gi|297621769|ref|YP_003709906.1|	-	1.4e-30	106.1	0.0	1.8e-30	105.7	0.0	1.1	1	0	0	1	1	1	1	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase	(HPPK)
Prefoldin_2	PF01920.20	gi|297621770|ref|YP_003709907.1|	-	0.014	15.3	0.1	2.7	8.0	0.0	2.1	2	0	0	2	2	2	0	Prefoldin	subunit
Not3	PF04065.15	gi|297621770|ref|YP_003709907.1|	-	0.023	14.1	0.2	0.038	13.4	0.2	1.4	1	1	0	1	1	1	0	Not1	N-terminal	domain,	CCR4-Not	complex	component
SOAR	PF16533.5	gi|297621770|ref|YP_003709907.1|	-	0.16	12.0	2.6	1.1	9.3	0.8	2.1	1	1	1	2	2	2	0	STIM1	Orai1-activating	region
KH_4	PF13083.6	gi|297621771|ref|YP_003709908.1|	-	3e-22	78.3	1.8	3.5e-22	78.0	1.8	1.1	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.29	gi|297621771|ref|YP_003709908.1|	-	4.8e-06	26.3	0.6	9.1e-06	25.4	0.6	1.5	1	0	0	1	1	1	1	KH	domain
KH_2	PF07650.17	gi|297621771|ref|YP_003709908.1|	-	0.00026	20.8	1.9	0.00032	20.5	1.9	1.3	1	0	0	1	1	1	1	KH	domain
KH_5	PF13184.6	gi|297621771|ref|YP_003709908.1|	-	0.0066	16.5	1.0	0.0085	16.2	0.6	1.5	1	1	0	1	1	1	1	NusA-like	KH	domain
Tyr_Deacylase	PF02580.16	gi|297621772|ref|YP_003709909.1|	-	3.1e-55	186.6	0.1	3.5e-55	186.5	0.1	1.0	1	0	0	1	1	1	1	D-Tyr-tRNA(Tyr)	deacylase
STELLO	PF03385.17	gi|297621773|ref|YP_003709910.1|	-	0.0076	15.1	0.3	0.0076	15.1	0.3	1.9	1	1	1	2	2	2	1	STELLO	glycosyltransferases
PseudoU_synth_2	PF00849.22	gi|297621774|ref|YP_003709911.1|	-	1.4e-34	119.5	0.1	2.1e-34	118.9	0.1	1.2	1	0	0	1	1	1	1	RNA	pseudouridylate	synthase
S4	PF01479.25	gi|297621774|ref|YP_003709911.1|	-	1.8e-06	27.6	0.1	4.7e-06	26.2	0.0	1.8	2	0	0	2	2	2	1	S4	domain
DUF4680	PF15730.5	gi|297621776|ref|YP_003709913.1|	-	3.2e-05	24.3	2.3	3.8e-05	24.1	2.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4680)
O-antigen_lig	PF13425.6	gi|297621776|ref|YP_003709913.1|	-	1.2	7.9	3.8	1.3	7.8	3.8	1.0	1	0	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
RecX	PF02631.16	gi|297621777|ref|YP_003709914.1|	-	2.2e-24	86.2	0.3	6.9e-24	84.6	0.1	1.7	1	1	1	2	2	2	2	RecX	family
DNA_topoisoIV	PF00521.20	gi|297621778|ref|YP_003709915.1|	-	6.9e-109	364.6	0.2	9.2e-109	364.2	0.2	1.1	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
Tho1_MOS11_C	PF18592.1	gi|297621778|ref|YP_003709915.1|	-	0.02	14.7	0.7	0.047	13.5	0.7	1.6	1	0	0	1	1	1	0	Tho1/MOS11	C-terminal	domain
SRI	PF08236.11	gi|297621778|ref|YP_003709915.1|	-	0.065	13.4	1.8	0.29	11.3	1.8	2.2	1	0	0	1	1	1	0	SRI	(Set2	Rpb1	interacting)	domain
Med4	PF10018.9	gi|297621778|ref|YP_003709915.1|	-	8.2	6.1	8.1	18	5.0	1.3	2.3	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
DNA_gyraseB	PF00204.25	gi|297621779|ref|YP_003709916.1|	-	8.5e-33	113.3	0.2	1.7e-32	112.3	0.2	1.4	1	0	0	1	1	1	1	DNA	gyrase	B
Toprim	PF01751.22	gi|297621779|ref|YP_003709916.1|	-	1.7e-12	47.5	1.2	9.9e-12	45.0	0.0	2.8	2	1	1	3	3	3	1	Toprim	domain
DNA_gyraseB_C	PF00986.21	gi|297621779|ref|YP_003709916.1|	-	4.6e-08	33.1	0.0	9.6e-08	32.1	0.0	1.6	1	0	0	1	1	1	1	DNA	gyrase	B	subunit,	carboxyl	terminus
HATPase_c_3	PF13589.6	gi|297621779|ref|YP_003709916.1|	-	8e-08	32.2	0.1	1.8e-07	31.0	0.1	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.26	gi|297621779|ref|YP_003709916.1|	-	8.1e-08	32.8	0.3	1.9e-07	31.5	0.3	1.7	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
TOPRIM_C	PF16898.5	gi|297621779|ref|YP_003709916.1|	-	0.022	15.0	2.7	0.073	13.4	0.2	2.7	2	0	0	2	2	2	0	C-terminal	associated	domain	of	TOPRIM
Herpes_UL92	PF03048.14	gi|297621779|ref|YP_003709916.1|	-	0.14	11.9	0.2	0.28	10.9	0.2	1.4	1	0	0	1	1	1	0	UL92	family
GAS2	PF02187.17	gi|297621779|ref|YP_003709916.1|	-	0.22	11.7	0.8	1.4	9.1	0.1	2.4	2	0	0	2	2	2	0	Growth-Arrest-Specific	Protein	2	Domain
Polysacc_synt_2	PF02719.15	gi|297621780|ref|YP_003709917.1|	-	1e-98	330.2	0.0	1.2e-98	329.9	0.0	1.0	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
Epimerase	PF01370.21	gi|297621780|ref|YP_003709917.1|	-	4.6e-20	72.1	0.0	3.9e-19	69.1	0.0	2.0	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|297621780|ref|YP_003709917.1|	-	4.2e-17	62.6	0.0	7.3e-16	58.5	0.0	2.0	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|297621780|ref|YP_003709917.1|	-	6.9e-17	61.4	0.0	9.6e-17	60.9	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|297621780|ref|YP_003709917.1|	-	5.1e-10	38.9	0.0	2.6e-08	33.3	0.0	2.6	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|297621780|ref|YP_003709917.1|	-	2e-08	33.7	0.1	2.7e-07	30.0	0.1	2.3	1	1	1	2	2	2	1	Male	sterility	protein
adh_short	PF00106.25	gi|297621780|ref|YP_003709917.1|	-	1.2e-06	28.2	0.0	1.8e-06	27.5	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
NAD_binding_10	PF13460.6	gi|297621780|ref|YP_003709917.1|	-	8.1e-06	25.9	0.0	1.2e-05	25.3	0.0	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
KR	PF08659.10	gi|297621780|ref|YP_003709917.1|	-	8.9e-06	25.7	0.0	5.7e-05	23.1	0.0	2.1	2	0	0	2	2	2	1	KR	domain
Shikimate_DH	PF01488.20	gi|297621780|ref|YP_003709917.1|	-	0.0046	17.0	0.0	0.011	15.8	0.0	1.6	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NmrA	PF05368.13	gi|297621780|ref|YP_003709917.1|	-	0.025	14.1	0.0	0.037	13.6	0.0	1.2	1	0	0	1	1	1	0	NmrA-like	family
NAD_Gly3P_dh_N	PF01210.23	gi|297621780|ref|YP_003709917.1|	-	0.044	13.8	0.0	3.7	7.5	0.0	2.3	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DUF1177	PF06675.11	gi|297621780|ref|YP_003709917.1|	-	0.099	11.5	0.1	0.69	8.7	0.2	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1177)
GlutR_N	PF05201.15	gi|297621781|ref|YP_003709918.1|	-	7.7e-39	132.8	0.1	7.6e-38	129.6	0.1	2.1	2	0	0	2	2	2	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Shikimate_DH	PF01488.20	gi|297621781|ref|YP_003709918.1|	-	2.6e-18	66.4	0.0	5.5e-18	65.4	0.0	1.5	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.17	gi|297621781|ref|YP_003709918.1|	-	0.0073	16.9	0.0	0.015	15.9	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
tRNA-synt_2	PF00152.20	gi|297621783|ref|YP_003709920.1|	-	3.5e-85	285.8	0.3	4.4e-85	285.5	0.3	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|297621783|ref|YP_003709920.1|	-	1.3e-13	50.7	0.1	2.5e-13	49.8	0.1	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|297621783|ref|YP_003709920.1|	-	0.00056	19.5	0.4	0.14	11.6	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
AP_endonuc_2	PF01261.24	gi|297621784|ref|YP_003709921.1|	-	1.4e-34	119.4	0.0	1.7e-34	119.1	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
MurJ	PF03023.14	gi|297621785|ref|YP_003709922.1|	-	2.1e-91	306.8	25.7	2.6e-91	306.5	25.7	1.0	1	0	0	1	1	1	1	Lipid	II	flippase	MurJ
Polysacc_synt_C	PF14667.6	gi|297621785|ref|YP_003709922.1|	-	0.0045	17.1	8.7	0.0045	17.1	8.7	3.5	3	0	0	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
LRRFIP	PF09738.9	gi|297621786|ref|YP_003709923.1|	-	0.0025	17.3	0.2	0.005	16.4	0.2	1.4	1	0	0	1	1	1	1	LRRFIP	family
HsbA	PF12296.8	gi|297621786|ref|YP_003709923.1|	-	0.0032	17.9	5.8	5.4	7.5	0.0	4.5	2	1	1	3	3	3	2	Hydrophobic	surface	binding	protein	A
HbrB	PF08539.11	gi|297621786|ref|YP_003709923.1|	-	0.1	12.6	0.1	0.27	11.2	0.1	1.7	1	0	0	1	1	1	0	HbrB-like
YkyA	PF10368.9	gi|297621786|ref|YP_003709923.1|	-	1.7	8.3	8.3	1.9	8.1	1.5	2.8	3	0	0	3	3	3	0	Putative	cell-wall	binding	lipoprotein
AAA_13	PF13166.6	gi|297621786|ref|YP_003709923.1|	-	7.5	5.1	10.1	43	2.5	10.1	1.8	1	1	0	1	1	1	0	AAA	domain
Ribosomal_S4	PF00163.19	gi|297621787|ref|YP_003709924.1|	-	2.1e-24	86.3	1.3	3.3e-24	85.6	1.3	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S4/S9	N-terminal	domain
S4	PF01479.25	gi|297621787|ref|YP_003709924.1|	-	4.2e-17	61.6	0.1	6.7e-17	60.9	0.1	1.3	1	0	0	1	1	1	1	S4	domain
S4_2	PF13275.6	gi|297621787|ref|YP_003709924.1|	-	0.0054	16.5	0.1	0.011	15.5	0.1	1.5	1	0	0	1	1	1	1	S4	domain
Ank	PF00023.30	gi|297621787|ref|YP_003709924.1|	-	0.15	12.5	0.0	0.3	11.6	0.0	1.6	1	0	0	1	1	1	0	Ankyrin	repeat
HisKA	PF00512.25	gi|297621788|ref|YP_003709925.1|	-	1.7e-08	34.3	0.0	2.8e-08	33.7	0.0	1.3	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
HATPase_c	PF02518.26	gi|297621788|ref|YP_003709925.1|	-	4.6e-07	30.3	0.0	6.7e-07	29.8	0.0	1.3	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Pterin_bind	PF00809.22	gi|297621788|ref|YP_003709925.1|	-	0.0035	17.0	0.0	0.0046	16.7	0.0	1.2	1	0	0	1	1	1	1	Pterin	binding	enzyme
Sigma54_activat	PF00158.26	gi|297621789|ref|YP_003709926.1|	-	3.5e-70	235.1	0.3	9.7e-70	233.6	0.1	1.8	2	0	0	2	2	2	1	Sigma-54	interaction	domain
Response_reg	PF00072.24	gi|297621789|ref|YP_003709926.1|	-	5.5e-30	103.8	0.0	1.5e-29	102.4	0.0	1.8	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Sigma54_activ_2	PF14532.6	gi|297621789|ref|YP_003709926.1|	-	1.3e-22	80.4	0.0	4.2e-22	78.7	0.0	1.9	1	1	0	1	1	1	1	Sigma-54	interaction	domain
HTH_8	PF02954.19	gi|297621789|ref|YP_003709926.1|	-	1.3e-15	56.8	0.3	5.2e-15	55.0	0.3	2.1	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	Fis	family
AAA_5	PF07728.14	gi|297621789|ref|YP_003709926.1|	-	1.5e-07	31.5	0.0	3.3e-07	30.4	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|297621789|ref|YP_003709926.1|	-	3e-06	27.7	0.3	1.3e-05	25.7	0.0	2.3	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_30	PF13556.6	gi|297621789|ref|YP_003709926.1|	-	0.00013	21.7	0.1	0.00037	20.2	0.1	1.8	1	0	0	1	1	1	1	PucR	C-terminal	helix-turn-helix	domain
HTH_23	PF13384.6	gi|297621789|ref|YP_003709926.1|	-	0.00058	19.6	0.0	0.0012	18.6	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
Mg_chelatase	PF01078.21	gi|297621789|ref|YP_003709926.1|	-	0.0019	17.6	0.1	0.12	11.8	0.1	2.3	1	1	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.11	gi|297621789|ref|YP_003709926.1|	-	0.0035	17.2	0.2	0.015	15.2	0.0	2.2	3	0	0	3	3	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|297621789|ref|YP_003709926.1|	-	0.0051	17.2	0.0	0.01	16.2	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
HTH_28	PF13518.6	gi|297621789|ref|YP_003709926.1|	-	0.012	15.7	0.0	0.024	14.8	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
AAA_22	PF13401.6	gi|297621789|ref|YP_003709926.1|	-	0.026	14.8	0.0	0.091	13.0	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
HTH_Tnp_ISL3	PF13542.6	gi|297621789|ref|YP_003709926.1|	-	0.027	13.9	0.0	0.093	12.2	0.0	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
AAA_18	PF13238.6	gi|297621789|ref|YP_003709926.1|	-	0.028	15.0	0.0	0.16	12.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|297621789|ref|YP_003709926.1|	-	0.045	13.3	0.0	0.094	12.2	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
IstB_IS21	PF01695.17	gi|297621789|ref|YP_003709926.1|	-	0.05	13.3	0.0	0.084	12.6	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
PhoH	PF02562.16	gi|297621789|ref|YP_003709926.1|	-	0.064	12.7	0.1	0.19	11.1	0.0	1.8	2	0	0	2	2	2	0	PhoH-like	protein
YabA	PF06156.13	gi|297621789|ref|YP_003709926.1|	-	0.16	12.6	1.9	2.8	8.6	0.6	2.8	2	0	0	2	2	2	0	Initiation	control	protein	YabA
DDE_3	PF13358.6	gi|297621791|ref|YP_003709928.1|	-	5.9e-30	104.0	0.0	9.5e-30	103.3	0.0	1.4	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.6	gi|297621791|ref|YP_003709928.1|	-	3.4e-17	61.8	0.1	1e-16	60.3	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|297621791|ref|YP_003709928.1|	-	1.8e-06	27.9	0.0	6.4e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|297621791|ref|YP_003709928.1|	-	9e-06	25.3	0.0	2.2e-05	24.1	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297621791|ref|YP_003709928.1|	-	1.3e-05	25.3	0.0	4.8e-05	23.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.26	gi|297621791|ref|YP_003709928.1|	-	4e-05	23.8	0.0	0.00041	20.5	0.0	2.2	2	0	0	2	2	2	1	Integrase	core	domain
DDE_Tnp_ISAZ013	PF07592.11	gi|297621791|ref|YP_003709928.1|	-	0.00011	21.3	0.3	0.21	10.5	0.1	2.2	2	0	0	2	2	2	2	Rhodopirellula	transposase	DDE	domain
Sigma70_r4_2	PF08281.12	gi|297621791|ref|YP_003709928.1|	-	0.00037	20.1	0.0	0.00077	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Terminase_5	PF06056.12	gi|297621791|ref|YP_003709928.1|	-	0.00061	19.6	0.0	0.0013	18.5	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_40	PF14493.6	gi|297621791|ref|YP_003709928.1|	-	0.0033	17.9	0.1	0.016	15.7	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|297621791|ref|YP_003709928.1|	-	0.0063	16.0	0.0	0.017	14.6	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
rve_3	PF13683.6	gi|297621791|ref|YP_003709928.1|	-	0.027	14.2	0.0	0.082	12.7	0.0	1.8	1	0	0	1	1	1	0	Integrase	core	domain
HTH_38	PF13936.6	gi|297621791|ref|YP_003709928.1|	-	0.037	13.8	1.6	0.43	10.4	0.0	2.7	3	0	0	3	3	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|297621791|ref|YP_003709928.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.7	gi|297621791|ref|YP_003709928.1|	-	0.13	12.3	0.0	0.28	11.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.19	gi|297621791|ref|YP_003709928.1|	-	0.16	11.5	0.0	0.65	9.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.6	gi|297621791|ref|YP_003709928.1|	-	0.86	9.9	3.6	5.9	7.2	0.1	3.1	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
DUF4277	PF14104.6	gi|297621792|ref|YP_003709929.1|	-	6.4e-42	142.3	0.0	8.5e-42	141.9	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4277)
Ank_2	PF12796.7	gi|297621793|ref|YP_003709930.1|	-	8.9e-17	61.5	4.0	4.8e-06	27.1	0.0	2.8	2	1	1	3	3	3	3	Ankyrin	repeats	(3	copies)
Ank_5	PF13857.6	gi|297621793|ref|YP_003709930.1|	-	2.1e-16	59.8	4.2	3.7e-09	36.7	0.2	3.7	2	1	1	3	3	3	3	Ankyrin	repeats	(many	copies)
Ank_4	PF13637.6	gi|297621793|ref|YP_003709930.1|	-	2.9e-16	59.6	2.3	8.3e-08	32.6	0.1	4.1	3	1	1	4	4	4	2	Ankyrin	repeats	(many	copies)
Ank_3	PF13606.6	gi|297621793|ref|YP_003709930.1|	-	2.6e-12	45.8	2.5	0.00015	21.9	0.0	5.5	6	0	0	6	6	6	2	Ankyrin	repeat
Ank	PF00023.30	gi|297621793|ref|YP_003709930.1|	-	1.7e-10	40.8	2.8	0.00016	22.0	0.1	4.3	4	0	0	4	4	4	3	Ankyrin	repeat
DUF3618	PF12277.8	gi|297621793|ref|YP_003709930.1|	-	0.068	13.4	3.7	0.19	12.0	3.7	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3618)
COG2	PF06148.11	gi|297621793|ref|YP_003709930.1|	-	0.11	12.6	0.1	0.21	11.7	0.1	1.5	1	0	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
XH	PF03469.14	gi|297621794|ref|YP_003709931.1|	-	0.061	13.2	1.3	0.18	11.7	1.3	1.8	1	0	0	1	1	1	0	XH	domain
DDE_3	PF13358.6	gi|297621796|ref|YP_003709933.1|	-	1.6e-30	105.8	0.0	2.6e-30	105.1	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.6	gi|297621796|ref|YP_003709933.1|	-	3.4e-17	61.8	0.1	1e-16	60.3	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|297621796|ref|YP_003709933.1|	-	1.8e-06	27.9	0.0	6.4e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|297621796|ref|YP_003709933.1|	-	9e-06	25.3	0.0	2.2e-05	24.1	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297621796|ref|YP_003709933.1|	-	1.3e-05	25.2	0.0	4.8e-05	23.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.26	gi|297621796|ref|YP_003709933.1|	-	3.5e-05	24.0	0.0	0.00038	20.6	0.0	2.2	2	0	0	2	2	2	1	Integrase	core	domain
DDE_Tnp_ISAZ013	PF07592.11	gi|297621796|ref|YP_003709933.1|	-	0.00011	21.4	0.3	0.21	10.5	0.1	2.2	2	0	0	2	2	2	2	Rhodopirellula	transposase	DDE	domain
Sigma70_r4_2	PF08281.12	gi|297621796|ref|YP_003709933.1|	-	0.00037	20.1	0.0	0.00077	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Terminase_5	PF06056.12	gi|297621796|ref|YP_003709933.1|	-	0.00062	19.6	0.0	0.0013	18.5	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_40	PF14493.6	gi|297621796|ref|YP_003709933.1|	-	0.0036	17.7	0.1	0.016	15.7	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|297621796|ref|YP_003709933.1|	-	0.0063	16.0	0.0	0.017	14.6	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
rve_3	PF13683.6	gi|297621796|ref|YP_003709933.1|	-	0.031	14.1	0.0	0.095	12.5	0.0	1.9	1	0	0	1	1	1	0	Integrase	core	domain
HTH_38	PF13936.6	gi|297621796|ref|YP_003709933.1|	-	0.038	13.8	1.6	0.43	10.4	0.0	2.7	3	0	0	3	3	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|297621796|ref|YP_003709933.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.7	gi|297621796|ref|YP_003709933.1|	-	0.13	12.3	0.0	0.28	11.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.19	gi|297621796|ref|YP_003709933.1|	-	0.16	11.5	0.0	0.65	9.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.6	gi|297621796|ref|YP_003709933.1|	-	0.86	9.9	3.6	5.9	7.2	0.1	3.1	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
MAF_flag10	PF01973.18	gi|297621797|ref|YP_003709934.1|	-	2.8e-41	141.1	0.0	5.8e-41	140.0	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
MAF_flag10	PF01973.18	gi|297621798|ref|YP_003709935.1|	-	1e-27	96.9	0.0	2e-27	95.9	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
MORN_2	PF07661.13	gi|297621798|ref|YP_003709935.1|	-	9.9e-15	52.9	12.5	0.34	11.3	0.7	8.8	9	0	0	9	9	9	5	MORN	repeat	variant
MORN	PF02493.20	gi|297621798|ref|YP_003709935.1|	-	1.9	8.6	8.0	12	6.0	0.3	4.3	4	0	0	4	4	4	0	MORN	repeat
MAF_flag10	PF01973.18	gi|297621799|ref|YP_003709936.1|	-	4.7e-36	124.1	0.0	9.1e-36	123.1	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
MORN_2	PF07661.13	gi|297621799|ref|YP_003709936.1|	-	1.7e-10	39.9	14.0	0.079	13.2	0.1	8.3	6	3	2	9	9	9	5	MORN	repeat	variant
WXG100	PF06013.12	gi|297621799|ref|YP_003709936.1|	-	0.28	11.4	3.7	20	5.5	0.0	3.2	3	0	0	3	3	3	0	Proteins	of	100	residues	with	WXG
RRP36	PF06102.12	gi|297621799|ref|YP_003709936.1|	-	5.3	7.0	11.1	1.4	8.8	2.6	2.4	2	0	0	2	2	2	0	rRNA	biogenesis	protein	RRP36
DUF3878	PF12994.7	gi|297621800|ref|YP_003709937.1|	-	0.02	14.3	1.7	0.023	14.1	1.7	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function,	E.	rectale	Gene	description	(DUF3878)
Ku_C	PF03730.14	gi|297621800|ref|YP_003709937.1|	-	0.57	10.9	6.6	4.8	7.9	3.2	2.2	2	0	0	2	2	2	0	Ku70/Ku80	C-terminal	arm
FlxA	PF14282.6	gi|297621800|ref|YP_003709937.1|	-	1.6	8.8	10.0	0.32	11.0	5.0	2.0	2	0	0	2	2	2	0	FlxA-like	protein
HSDR_N_2	PF13588.6	gi|297621801|ref|YP_003709938.1|	-	5.3e-13	48.9	0.0	6.7e-13	48.6	0.0	1.1	1	0	0	1	1	1	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
HSDR_N	PF04313.14	gi|297621801|ref|YP_003709938.1|	-	0.025	14.5	0.0	0.045	13.7	0.0	1.5	1	1	0	2	2	2	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
Ribosomal_S30AE	PF02482.19	gi|297621802|ref|YP_003709939.1|	-	3.2e-21	75.9	6.9	7.4e-21	74.7	6.9	1.6	1	0	0	1	1	1	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
Ribosom_S30AE_C	PF16321.5	gi|297621802|ref|YP_003709939.1|	-	8.7e-20	70.2	0.1	2.3e-19	68.8	0.1	1.8	1	0	0	1	1	1	1	Sigma	54	modulation/S30EA	ribosomal	protein	C	terminus
DUF4715	PF15835.5	gi|297621802|ref|YP_003709939.1|	-	0.036	14.2	0.3	0.061	13.4	0.3	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4715)
GPW_gp25	PF04965.14	gi|297621802|ref|YP_003709939.1|	-	1	9.2	5.1	2.5	7.9	0.4	2.4	1	1	1	2	2	2	0	Gene	25-like	lysozyme
RecO_N	PF11967.8	gi|297621803|ref|YP_003709940.1|	-	5.1e-13	48.8	0.0	9.3e-13	48.0	0.0	1.5	1	0	0	1	1	1	1	Recombination	protein	O	N	terminal
RecO_C	PF02565.15	gi|297621803|ref|YP_003709940.1|	-	1.1e-08	35.1	1.2	1.6e-08	34.5	1.2	1.2	1	0	0	1	1	1	1	Recombination	protein	O	C	terminal
RecO_N_2	PF13114.6	gi|297621803|ref|YP_003709940.1|	-	0.01	15.5	0.1	0.026	14.2	0.0	1.8	2	0	0	2	2	2	0	RecO	N	terminal
DUF155	PF02582.14	gi|297621804|ref|YP_003709941.1|	-	4.6e-48	163.6	0.0	6.5e-48	163.1	0.0	1.2	1	0	0	1	1	1	1	Uncharacterised	ACR,	YagE	family	COG1723
YidD	PF01809.18	gi|297621805|ref|YP_003709942.1|	-	1.8e-27	95.0	0.3	1.9e-27	94.9	0.3	1.0	1	0	0	1	1	1	1	Putative	membrane	protein	insertion	efficiency	factor
COE1_HLH	PF16423.5	gi|297621805|ref|YP_003709942.1|	-	0.078	12.7	0.5	0.13	12.0	0.4	1.5	2	0	0	2	2	2	0	Transcription	factor	COE1	helix-loop-helix	domain
Ribonuc_red_lgC	PF02867.15	gi|297621806|ref|YP_003709943.1|	-	5.3e-182	606.0	0.0	8.9e-182	605.3	0.0	1.4	1	0	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
ATP-cone	PF03477.16	gi|297621806|ref|YP_003709943.1|	-	2e-25	89.1	6.5	2.7e-18	66.3	1.3	2.7	2	0	0	2	2	2	2	ATP	cone	domain
Ribonuc_red_lgN	PF00317.21	gi|297621806|ref|YP_003709943.1|	-	2.3e-20	72.4	0.0	5.4e-20	71.2	0.0	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
Ribonuc_red_sm	PF00268.21	gi|297621807|ref|YP_003709944.1|	-	2e-85	286.6	0.4	2.6e-85	286.3	0.4	1.1	1	0	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
PEPCK_GTP	PF00821.18	gi|297621808|ref|YP_003709945.1|	-	2.7e-175	582.4	0.0	3.4e-175	582.1	0.0	1.1	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase	C-terminal	P-loop	domain
PEPCK_N	PF17297.2	gi|297621808|ref|YP_003709945.1|	-	1.8e-105	351.4	0.0	2.3e-105	351.0	0.0	1.1	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase	N-terminal	domain
Virul_Fac	PF10139.9	gi|297621808|ref|YP_003709945.1|	-	0.2	9.8	0.0	0.29	9.3	0.0	1.1	1	0	0	1	1	1	0	Putative	bacterial	virulence	factor
MreB_Mbl	PF06723.13	gi|297621809|ref|YP_003709946.1|	-	1.4e-148	494.1	5.9	1.6e-148	493.9	5.9	1.0	1	0	0	1	1	1	1	MreB/Mbl	protein
HSP70	PF00012.20	gi|297621809|ref|YP_003709946.1|	-	2.9e-11	42.3	0.7	5.3e-10	38.1	0.0	2.1	1	1	1	2	2	2	1	Hsp70	protein
FtsA	PF14450.6	gi|297621809|ref|YP_003709946.1|	-	2.2e-10	40.9	1.2	6.4e-10	39.4	0.1	2.1	2	0	0	2	2	2	1	Cell	division	protein	FtsA
Actin	PF00022.19	gi|297621809|ref|YP_003709946.1|	-	2.8e-08	32.8	0.0	0.00068	18.3	0.0	2.5	1	1	0	2	2	2	2	Actin
PilM_2	PF11104.8	gi|297621809|ref|YP_003709946.1|	-	0.00033	19.8	0.1	0.55	9.2	0.0	3.0	2	1	0	3	3	3	2	Type	IV	pilus	assembly	protein	PilM;
EutA	PF06277.11	gi|297621809|ref|YP_003709946.1|	-	0.00098	18.1	0.2	0.015	14.2	0.0	2.3	2	0	0	2	2	2	1	Ethanolamine	utilisation	protein	EutA
DDR	PF08841.10	gi|297621809|ref|YP_003709946.1|	-	0.018	14.1	0.2	0.034	13.1	0.2	1.5	1	0	0	1	1	1	0	Diol	dehydratase	reactivase	ATPase-like	domain
Ppx-GppA	PF02541.16	gi|297621809|ref|YP_003709946.1|	-	0.056	12.9	0.0	0.12	11.8	0.0	1.5	1	0	0	1	1	1	0	Ppx/GppA	phosphatase	family
SNF2_N	PF00176.23	gi|297621810|ref|YP_003709947.1|	-	1.3e-60	205.0	0.4	2.3e-60	204.2	0.4	1.4	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_C	PF00271.31	gi|297621810|ref|YP_003709947.1|	-	9e-21	74.3	0.1	9.8e-19	67.7	0.0	3.0	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|297621810|ref|YP_003709947.1|	-	2.7e-10	40.5	0.4	2.7e-10	40.5	0.4	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SWIM	PF04434.17	gi|297621810|ref|YP_003709947.1|	-	0.0001	21.9	1.1	0.00028	20.5	1.1	1.8	1	0	0	1	1	1	1	SWIM	zinc	finger
SWI2_SNF2	PF18766.1	gi|297621810|ref|YP_003709947.1|	-	0.0011	18.7	0.0	0.0037	16.9	0.0	1.9	1	0	0	1	1	1	1	SWI2/SNF2	ATPase
AAA_22	PF13401.6	gi|297621810|ref|YP_003709947.1|	-	0.0054	17.0	0.3	0.024	14.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
Trigger_N	PF05697.13	gi|297621811|ref|YP_003709948.1|	-	9e-24	84.4	9.9	2.9e-23	82.8	5.4	2.8	2	1	0	2	2	2	1	Bacterial	trigger	factor	protein	(TF)
Trigger_C	PF05698.14	gi|297621811|ref|YP_003709948.1|	-	3.1e-20	72.8	6.1	3.1e-20	72.8	6.1	2.0	3	0	0	3	3	3	1	Bacterial	trigger	factor	protein	(TF)	C-terminus
CLP_protease	PF00574.23	gi|297621812|ref|YP_003709949.1|	-	1.1e-77	260.1	0.0	1.3e-77	259.8	0.0	1.0	1	0	0	1	1	1	1	Clp	protease
AAA_2	PF07724.14	gi|297621813|ref|YP_003709950.1|	-	7.9e-46	156.3	0.1	1.9e-45	155.1	0.1	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
zf-C4_ClpX	PF06689.13	gi|297621813|ref|YP_003709950.1|	-	1.8e-16	59.7	3.0	3.7e-16	58.7	3.0	1.6	1	0	0	1	1	1	1	ClpX	C4-type	zinc	finger
AAA	PF00004.29	gi|297621813|ref|YP_003709950.1|	-	1.3e-15	58.0	0.0	3.6e-15	56.5	0.0	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ClpB_D2-small	PF10431.9	gi|297621813|ref|YP_003709950.1|	-	2.4e-13	49.9	0.4	6.8e-13	48.5	0.4	1.8	1	0	0	1	1	1	1	C-terminal,	D2-small	domain,	of	ClpB	protein
AAA_5	PF07728.14	gi|297621813|ref|YP_003709950.1|	-	5.4e-07	29.7	0.1	2.7e-06	27.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.21	gi|297621813|ref|YP_003709950.1|	-	6.1e-07	29.0	0.2	0.0012	18.3	0.1	3.4	2	1	0	3	3	3	1	Magnesium	chelatase,	subunit	ChlI
RuvB_N	PF05496.12	gi|297621813|ref|YP_003709950.1|	-	1.9e-06	27.7	0.2	7.3e-06	25.8	0.2	2.0	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
MCM	PF00493.23	gi|297621813|ref|YP_003709950.1|	-	2.1e-06	27.0	0.1	4.4e-06	26.0	0.1	1.4	1	0	0	1	1	1	1	MCM	P-loop	domain
AAA_22	PF13401.6	gi|297621813|ref|YP_003709950.1|	-	7.4e-05	23.0	0.2	0.0011	19.2	0.2	2.5	1	1	0	1	1	1	1	AAA	domain
TIP49	PF06068.13	gi|297621813|ref|YP_003709950.1|	-	0.00033	20.0	0.1	0.0012	18.1	0.0	1.9	1	1	1	2	2	2	1	TIP49	P-loop	domain
AAA_23	PF13476.6	gi|297621813|ref|YP_003709950.1|	-	0.00084	19.9	1.8	0.00084	19.9	1.8	2.2	2	1	0	2	2	2	1	AAA	domain
SMC_N	PF02463.19	gi|297621813|ref|YP_003709950.1|	-	0.00087	18.8	0.0	0.0025	17.3	0.0	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Sigma54_activat	PF00158.26	gi|297621813|ref|YP_003709950.1|	-	0.0017	18.1	0.0	0.064	13.0	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
Sigma54_activ_2	PF14532.6	gi|297621813|ref|YP_003709950.1|	-	0.002	18.2	0.0	0.0085	16.2	0.0	2.0	2	1	0	2	2	1	1	Sigma-54	interaction	domain
IstB_IS21	PF01695.17	gi|297621813|ref|YP_003709950.1|	-	0.0029	17.4	0.0	0.008	15.9	0.0	1.7	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_7	PF12775.7	gi|297621813|ref|YP_003709950.1|	-	0.0059	16.1	0.0	0.012	15.1	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
T2SSE	PF00437.20	gi|297621813|ref|YP_003709950.1|	-	0.013	14.6	0.0	0.028	13.5	0.0	1.6	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_24	PF13479.6	gi|297621813|ref|YP_003709950.1|	-	0.017	14.9	0.1	0.036	13.8	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|297621813|ref|YP_003709950.1|	-	0.02	15.3	0.0	0.045	14.1	0.0	1.7	1	0	0	1	1	1	0	AAA	ATPase	domain
TsaE	PF02367.17	gi|297621813|ref|YP_003709950.1|	-	0.021	14.8	0.0	0.042	13.9	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_14	PF13173.6	gi|297621813|ref|YP_003709950.1|	-	0.026	14.5	0.0	0.082	12.9	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|297621813|ref|YP_003709950.1|	-	0.03	14.8	0.0	0.095	13.2	0.0	1.9	2	0	0	2	2	1	0	ABC	transporter
AAA_8	PF12780.7	gi|297621813|ref|YP_003709950.1|	-	0.035	13.4	0.0	0.47	9.7	0.0	2.2	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region	D4
AAA_18	PF13238.6	gi|297621813|ref|YP_003709950.1|	-	0.037	14.6	0.0	0.26	11.8	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_29	PF13555.6	gi|297621813|ref|YP_003709950.1|	-	0.046	13.5	0.0	0.11	12.2	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Parvo_NS1	PF01057.17	gi|297621813|ref|YP_003709950.1|	-	0.076	12.1	0.1	0.69	9.0	0.0	2.1	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
RNA_helicase	PF00910.22	gi|297621813|ref|YP_003709950.1|	-	0.09	13.2	0.0	0.42	11.0	0.0	2.2	1	1	1	2	2	1	0	RNA	helicase
SKI	PF01202.22	gi|297621813|ref|YP_003709950.1|	-	0.091	12.9	0.0	1.9	8.6	0.0	2.5	2	0	0	2	2	2	0	Shikimate	kinase
C1_2	PF03107.16	gi|297621813|ref|YP_003709950.1|	-	0.16	12.3	1.2	0.26	11.7	1.2	1.4	1	0	0	1	1	1	0	C1	domain
AAA_19	PF13245.6	gi|297621813|ref|YP_003709950.1|	-	0.17	12.2	1.7	1.8	8.9	0.1	3.0	2	1	1	3	3	3	0	AAA	domain
Ribosomal_S18	PF01084.20	gi|297621814|ref|YP_003709951.1|	-	0.092	13.0	0.2	0.25	11.6	0.2	1.7	1	0	0	1	1	1	0	Ribosomal	protein	S18
Tox-MPTase5	PF15641.6	gi|297621815|ref|YP_003709952.1|	-	0.00093	19.2	0.1	0.0035	17.4	0.1	2.0	1	0	0	1	1	1	1	Metallopeptidase	toxin	5
DUF948	PF06103.11	gi|297621815|ref|YP_003709952.1|	-	0.95	9.8	8.0	29	5.0	0.0	4.2	3	1	1	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF3837	PF12939.7	gi|297621815|ref|YP_003709952.1|	-	1.3	9.4	4.0	11	6.5	0.3	3.4	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3837)
DUF148	PF02520.17	gi|297621815|ref|YP_003709952.1|	-	1.4	9.0	12.8	0.22	11.6	1.3	3.2	2	1	2	4	4	4	0	Domain	of	unknown	function	DUF148
PLU-1	PF08429.11	gi|297621815|ref|YP_003709952.1|	-	5.2	6.1	5.4	1.2	8.3	0.8	2.0	2	0	0	2	2	2	0	PLU-1-like	protein
DUF2564	PF10819.8	gi|297621815|ref|YP_003709952.1|	-	5.3	7.5	5.9	2.8	8.4	0.3	3.2	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF2564)
HsbA	PF12296.8	gi|297621815|ref|YP_003709952.1|	-	5.4	7.5	9.8	27	5.2	0.4	4.8	3	1	1	4	4	4	0	Hydrophobic	surface	binding	protein	A
POTRA_TamA_1	PF17243.2	gi|297621816|ref|YP_003709953.1|	-	0.029	14.5	0.1	0.15	12.2	0.1	2.3	1	0	0	1	1	1	0	POTRA	domain	TamA	domain	1
Paramyxo_C	PF01692.18	gi|297621816|ref|YP_003709953.1|	-	0.03	13.7	0.1	0.054	12.9	0.1	1.4	1	0	0	1	1	1	0	Paramyxovirus	non-structural	protein	C
SPACA7	PF15307.6	gi|297621816|ref|YP_003709953.1|	-	0.1	12.9	0.9	0.33	11.2	0.9	1.8	1	0	0	1	1	1	0	Sperm	acrosome-associated	protein	7
DUF4404	PF14357.6	gi|297621816|ref|YP_003709953.1|	-	0.24	12.0	7.0	5.6	7.7	0.0	4.0	4	1	1	5	5	5	0	Domain	of	unknown	function	(DUF4404)
T4SS	PF07996.11	gi|297621816|ref|YP_003709953.1|	-	7.8	6.9	10.9	2.6	8.4	1.7	3.4	2	2	1	3	3	3	0	Type	IV	secretion	system	proteins
ApoO	PF09769.9	gi|297621817|ref|YP_003709954.1|	-	0.0036	17.3	2.0	0.0073	16.3	2.0	1.4	1	0	0	1	1	1	1	Apolipoprotein	O
COG2	PF06148.11	gi|297621817|ref|YP_003709954.1|	-	0.049	13.7	0.9	0.085	12.9	0.2	1.7	2	0	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF4677	PF15726.5	gi|297621817|ref|YP_003709954.1|	-	0.064	13.4	0.2	0.12	12.5	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4677)
DUF2937	PF11157.8	gi|297621817|ref|YP_003709954.1|	-	0.22	11.2	2.7	0.47	10.1	2.7	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2937)
DUF3135	PF11333.8	gi|297621817|ref|YP_003709954.1|	-	1.7	8.9	4.6	8.2	6.8	4.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3135)
TPR_3	PF07720.12	gi|297621818|ref|YP_003709955.1|	-	6.1e-10	38.9	5.8	0.00011	22.1	0.1	3.2	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297621818|ref|YP_003709955.1|	-	8.8e-07	28.6	0.0	0.048	13.8	0.0	3.7	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297621818|ref|YP_003709955.1|	-	4.9e-05	23.8	0.2	0.0066	16.9	0.0	3.1	3	1	2	5	5	5	1	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297621818|ref|YP_003709955.1|	-	5.6e-05	23.3	1.8	0.0014	18.8	0.5	2.4	1	1	2	3	3	3	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
SRP_TPR_like	PF17004.5	gi|297621818|ref|YP_003709955.1|	-	0.0021	18.1	0.2	0.0048	16.9	0.2	1.6	1	0	0	1	1	1	1	Putative	TPR-like	repeat
TPR_1	PF00515.28	gi|297621818|ref|YP_003709955.1|	-	0.0043	16.8	4.1	1.2	9.1	0.0	3.7	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621818|ref|YP_003709955.1|	-	0.0048	17.0	5.3	0.56	10.6	0.0	4.1	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|297621818|ref|YP_003709955.1|	-	0.026	15.2	0.0	0.19	12.4	0.0	2.1	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297621818|ref|YP_003709955.1|	-	0.072	13.8	6.0	68	4.4	0.3	4.6	5	0	0	5	5	5	0	Tetratricopeptide	repeat
Death	PF00531.22	gi|297621819|ref|YP_003709956.1|	-	0.023	14.9	0.1	0.71	10.1	0.0	3.1	3	0	0	3	3	3	0	Death	domain
DASH_Dam1	PF08653.10	gi|297621819|ref|YP_003709956.1|	-	0.33	10.8	4.3	0.82	9.5	0.1	3.9	3	0	0	3	3	3	0	DASH	complex	subunit	Dam1
DUF848	PF05852.11	gi|297621819|ref|YP_003709956.1|	-	0.38	10.9	3.0	3.6	7.7	0.0	3.4	3	0	0	3	3	3	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
CENP-H	PF05837.12	gi|297621819|ref|YP_003709956.1|	-	0.5	10.8	15.9	0.21	12.0	1.0	4.2	3	0	0	3	3	3	0	Centromere	protein	H	(CENP-H)
Baculo_PEP_C	PF04513.12	gi|297621819|ref|YP_003709956.1|	-	1.1	9.3	30.5	0.22	11.6	1.2	6.8	3	3	1	5	5	5	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
COG2	PF06148.11	gi|297621819|ref|YP_003709956.1|	-	1.2	9.2	13.8	1.6	8.8	0.8	5.3	4	2	0	4	4	4	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Blo-t-5	PF11642.8	gi|297621819|ref|YP_003709956.1|	-	1.6	8.7	10.1	12	5.9	0.5	3.8	3	1	0	3	3	3	0	Mite	allergen	Blo	t	5
Syntaxin-6_N	PF09177.11	gi|297621819|ref|YP_003709956.1|	-	2.7	8.6	13.7	2.5	8.7	0.2	5.0	5	2	0	6	6	6	0	Syntaxin	6,	N-terminal
TolA_bind_tri	PF16331.5	gi|297621819|ref|YP_003709956.1|	-	4.3	7.5	6.0	5.2	7.2	0.0	4.0	4	0	0	4	4	4	0	TolA	binding	protein	trimerisation
DUF2203	PF09969.9	gi|297621819|ref|YP_003709956.1|	-	6.4	7.5	11.4	19	6.0	0.0	4.5	3	1	2	5	5	5	0	Uncharacterized	conserved	protein	(DUF2203)
TPR_3	PF07720.12	gi|297621820|ref|YP_003709957.1|	-	4.6e-12	45.7	3.6	1.6e-05	24.8	0.1	2.4	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297621820|ref|YP_003709957.1|	-	2.6e-06	27.1	1.8	0.48	10.7	0.1	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297621820|ref|YP_003709957.1|	-	3.2e-06	27.3	0.1	1.3e-05	25.3	0.2	1.9	2	0	0	2	2	2	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_1	PF00515.28	gi|297621820|ref|YP_003709957.1|	-	2.2e-05	24.1	0.8	0.017	14.9	0.1	3.3	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|297621820|ref|YP_003709957.1|	-	0.0034	17.9	0.0	0.38	11.3	0.0	2.4	1	1	1	2	2	2	1	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621820|ref|YP_003709957.1|	-	0.0088	16.2	2.5	4.7	7.7	0.2	3.6	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297621820|ref|YP_003709957.1|	-	0.01	16.1	0.1	1	9.7	0.0	3.1	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|297621820|ref|YP_003709957.1|	-	0.029	14.8	0.1	18	6.0	0.2	3.2	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|297621820|ref|YP_003709957.1|	-	0.12	13.0	0.2	1.7	9.4	0.7	2.2	1	1	1	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297621820|ref|YP_003709957.1|	-	0.21	12.3	1.4	57	4.7	0.1	3.5	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|297621820|ref|YP_003709957.1|	-	0.88	9.5	0.1	0.88	9.5	0.1	2.7	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.6	gi|297621820|ref|YP_003709957.1|	-	3.5	7.8	6.9	17	5.6	0.1	2.9	3	0	0	3	3	3	0	Fis1	C-terminal	tetratricopeptide	repeat
DUF3458_C	PF17432.2	gi|297621822|ref|YP_003709959.1|	-	0.017	14.5	2.0	0.086	12.2	0.9	2.1	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3458_C)	ARM	repeats
Importin_rep_5	PF18816.1	gi|297621822|ref|YP_003709959.1|	-	0.085	13.2	0.0	0.23	11.8	0.0	1.7	1	0	0	1	1	1	0	Importin	repeat
Metal_resist	PF13801.6	gi|297621822|ref|YP_003709959.1|	-	0.18	12.0	1.5	0.43	10.8	0.8	2.0	2	0	0	2	2	2	0	Heavy-metal	resistance
Terminase_2	PF03592.16	gi|297621822|ref|YP_003709959.1|	-	0.52	10.8	3.3	1.8	9.0	3.3	2.1	1	1	0	1	1	1	0	Terminase	small	subunit
BP28CT	PF08146.12	gi|297621823|ref|YP_003709960.1|	-	0.076	12.8	1.6	3.3	7.6	0.1	2.9	2	1	1	3	3	3	0	BP28CT	(NUC211)	domain
CesT	PF05932.13	gi|297621824|ref|YP_003709961.1|	-	2.1e-14	53.7	0.0	2.6e-14	53.3	0.0	1.1	1	0	0	1	1	1	1	Tir	chaperone	protein	(CesT)	family
Chaperone_III	PF07824.12	gi|297621824|ref|YP_003709961.1|	-	0.042	14.1	0.0	0.052	13.8	0.0	1.2	1	0	0	1	1	1	0	Type	III	secretion	chaperone	domain
Yop-YscD_cpl	PF16697.5	gi|297621825|ref|YP_003709962.1|	-	1.1e-36	125.0	0.0	9.9e-21	73.9	0.0	2.6	2	0	0	2	2	2	2	Inner	membrane	component	of	T3SS,	cytoplasmic	domain
FHA	PF00498.26	gi|297621825|ref|YP_003709962.1|	-	2.9e-21	75.6	0.0	5.1e-13	49.2	0.0	2.5	2	0	0	2	2	2	2	FHA	domain
Yop-YscD_ppl	PF16693.5	gi|297621825|ref|YP_003709962.1|	-	2.7e-08	33.6	2.0	5.3e-08	32.6	2.0	1.4	1	0	0	1	1	1	1	Inner	membrane	component	of	T3SS,	periplasmic	domain
BON	PF04972.17	gi|297621825|ref|YP_003709962.1|	-	1.9e-05	24.9	0.2	0.019	15.3	0.4	3.3	3	0	0	3	3	3	1	BON	domain
T2SSB	PF16537.5	gi|297621825|ref|YP_003709962.1|	-	0.00012	21.6	0.1	0.00042	19.8	0.1	2.0	1	0	0	1	1	1	1	Type	II	secretion	system	protein	B
PilN	PF05137.13	gi|297621825|ref|YP_003709962.1|	-	0.026	14.6	0.3	48	4.2	0.0	3.5	3	0	0	3	3	3	0	Fimbrial	assembly	protein	(PilN)
AsnC_trans_reg	PF01037.21	gi|297621825|ref|YP_003709962.1|	-	0.14	12.1	0.0	1.3	9.0	0.0	2.3	2	0	0	2	2	2	0	Lrp/AsnC	ligand	binding	domain
DUF2613	PF11021.8	gi|297621825|ref|YP_003709962.1|	-	0.2	11.8	0.4	0.48	10.6	0.4	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2613)
YhzD	PF14120.6	gi|297621825|ref|YP_003709962.1|	-	0.37	10.9	1.8	1.4	9.1	1.0	2.2	2	0	0	2	2	2	0	YhzD-like	protein
DUF5398	PF17376.2	gi|297621826|ref|YP_003709963.1|	-	1.5e-38	131.2	5.9	1.7e-38	131.1	5.9	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5398)
Metal_resist	PF13801.6	gi|297621826|ref|YP_003709963.1|	-	0.13	12.5	0.0	0.15	12.2	0.0	1.1	1	0	0	1	1	1	0	Heavy-metal	resistance
DUF5407	PF17401.2	gi|297621827|ref|YP_003709964.1|	-	2e-44	149.7	7.3	3.3e-44	149.0	7.3	1.4	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5407)
Flagellin_C	PF00700.21	gi|297621827|ref|YP_003709964.1|	-	0.035	14.5	2.6	0.056	13.8	2.6	1.4	1	0	0	1	1	1	0	Bacterial	flagellin	C-terminal	helical	region
RRM_5	PF13893.6	gi|297621827|ref|YP_003709964.1|	-	0.041	13.5	0.1	0.05	13.2	0.1	1.3	1	0	0	1	1	1	0	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
HrpB1_HrpK	PF09613.10	gi|297621828|ref|YP_003709965.1|	-	0.00011	21.8	0.0	0.00013	21.5	0.0	1.1	1	0	0	1	1	1	1	Bacterial	type	III	secretion	protein	(HrpB1_HrpK)
Coatomer_E	PF04733.14	gi|297621828|ref|YP_003709965.1|	-	0.12	11.8	0.0	0.15	11.5	0.0	1.2	1	0	0	1	1	1	0	Coatomer	epsilon	subunit
HrpB2	PF09487.10	gi|297621829|ref|YP_003709966.1|	-	0.00035	21.0	9.9	0.024	15.1	1.7	2.8	2	1	0	2	2	2	2	Bacterial	type	III	secretion	protein	(HrpB2)
FliE	PF02049.18	gi|297621829|ref|YP_003709966.1|	-	0.16	12.1	9.3	0.15	12.2	2.7	2.7	2	1	1	3	3	3	0	Flagellar	hook-basal	body	complex	protein	FliE
DUF4404	PF14357.6	gi|297621829|ref|YP_003709966.1|	-	0.29	11.8	7.6	0.3	11.7	0.1	3.3	2	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4404)
Occludin_ELL	PF07303.13	gi|297621829|ref|YP_003709966.1|	-	0.52	11.1	0.1	0.52	11.1	0.1	2.6	2	2	1	3	3	3	0	Occludin	homology	domain
ATP-synt_ab	PF00006.25	gi|297621830|ref|YP_003709967.1|	-	3.5e-70	236.0	0.0	4.8e-70	235.5	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
T3SS_ATPase_C	PF18269.1	gi|297621830|ref|YP_003709967.1|	-	4.9e-24	84.0	0.0	8.2e-24	83.3	0.0	1.4	1	0	0	1	1	1	1	T3SS	EscN	ATPase	C-terminal	domain
ATP-synt_ab_N	PF02874.23	gi|297621830|ref|YP_003709967.1|	-	2.3e-06	28.0	0.5	5.2e-06	26.9	0.5	1.7	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
ABC_tran	PF00005.27	gi|297621830|ref|YP_003709967.1|	-	0.0063	17.0	0.1	0.018	15.6	0.1	1.7	1	1	1	2	2	2	1	ABC	transporter
DUF87	PF01935.17	gi|297621830|ref|YP_003709967.1|	-	0.09	12.9	0.2	0.18	11.9	0.2	1.4	1	0	0	1	1	1	0	Helicase	HerA,	central	domain
YscO-like	PF16789.5	gi|297621831|ref|YP_003709968.1|	-	1e-67	227.1	35.6	1.2e-67	227.0	35.6	1.0	1	0	0	1	1	1	1	YscO-like	protein
YscO	PF07321.12	gi|297621831|ref|YP_003709968.1|	-	1.9e-06	27.9	34.2	2.6e-06	27.5	34.2	1.3	1	0	0	1	1	1	1	Type	III	secretion	protein	YscO
FliJ	PF02050.16	gi|297621831|ref|YP_003709968.1|	-	5e-06	26.7	32.1	8.8e-05	22.7	31.2	2.4	1	1	1	2	2	2	2	Flagellar	FliJ	protein
HrpB7	PF09486.10	gi|297621831|ref|YP_003709968.1|	-	0.00048	20.5	22.9	0.00068	20.1	22.9	1.1	1	0	0	1	1	1	1	Bacterial	type	III	secretion	protein	(HrpB7)
Atg14	PF10186.9	gi|297621831|ref|YP_003709968.1|	-	0.15	11.1	22.4	0.22	10.6	22.3	1.4	1	1	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
FAD_oxidored	PF12831.7	gi|297621831|ref|YP_003709968.1|	-	0.33	10.3	5.9	0.38	10.1	5.9	1.1	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
DUF4407	PF14362.6	gi|297621831|ref|YP_003709968.1|	-	0.62	9.4	17.1	0.77	9.0	17.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Borrelia_P83	PF05262.11	gi|297621831|ref|YP_003709968.1|	-	0.71	8.3	29.3	0.91	7.9	29.3	1.0	1	0	0	1	1	1	0	Borrelia	P83/100	protein
DUF745	PF05335.13	gi|297621831|ref|YP_003709968.1|	-	0.74	9.5	16.4	0.87	9.3	7.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF745)
Exonuc_VII_L	PF02601.15	gi|297621831|ref|YP_003709968.1|	-	2.2	7.7	18.8	3.8	7.0	18.8	1.4	1	1	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF3552	PF12072.8	gi|297621831|ref|YP_003709968.1|	-	2.7	7.4	36.6	2.1	7.7	10.4	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3552)
Sulfatase_C	PF14707.6	gi|297621831|ref|YP_003709968.1|	-	2.9	8.7	8.3	15	6.3	1.9	2.2	1	1	0	2	2	2	0	C-terminal	region	of	aryl-sulfatase
She9_MDM33	PF05546.11	gi|297621831|ref|YP_003709968.1|	-	3	7.6	21.3	0.92	9.3	11.9	2.1	1	1	1	2	2	2	0	She9	/	Mdm33	family
Golgin_A5	PF09787.9	gi|297621831|ref|YP_003709968.1|	-	3.6	7.0	27.3	5.3	6.4	27.3	1.2	1	0	0	1	1	1	0	Golgin	subfamily	A	member	5
DUF3584	PF12128.8	gi|297621831|ref|YP_003709968.1|	-	4.2	4.8	27.5	2.4	5.6	12.6	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3584)
AAA_13	PF13166.6	gi|297621831|ref|YP_003709968.1|	-	7.5	5.1	20.1	9.9	4.7	20.1	1.1	1	0	0	1	1	1	0	AAA	domain
DUF4484	PF14831.6	gi|297621832|ref|YP_003709969.1|	-	3.1	7.8	9.2	0.22	11.6	2.8	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4484)
Methyltr_RsmB-F	PF01189.17	gi|297621833|ref|YP_003709970.1|	-	0.0039	16.8	0.0	0.0057	16.3	0.0	1.2	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
FliMN_C	PF01052.20	gi|297621833|ref|YP_003709970.1|	-	0.063	13.3	0.0	0.13	12.3	0.0	1.4	1	0	0	1	1	1	0	Type	III	flagellar	switch	regulator	(C-ring)	FliN	C-term
FliMN_C	PF01052.20	gi|297621834|ref|YP_003709971.1|	-	1.2e-17	63.7	0.4	1.7e-17	63.2	0.4	1.2	1	0	0	1	1	1	1	Type	III	flagellar	switch	regulator	(C-ring)	FliN	C-term
YL1	PF05764.13	gi|297621834|ref|YP_003709971.1|	-	0.032	14.3	28.7	0.038	14.1	28.7	1.1	1	0	0	1	1	1	0	YL1	nuclear	protein
SCP_3	PF17844.1	gi|297621834|ref|YP_003709971.1|	-	0.14	12.0	0.0	0.23	11.3	0.0	1.3	1	0	0	1	1	1	0	Bacterial	SCP	ortholog
CPSF100_C	PF13299.6	gi|297621834|ref|YP_003709971.1|	-	0.17	12.1	2.2	0.18	12.0	2.2	1.2	1	0	0	1	1	1	0	Cleavage	and	polyadenylation	factor	2	C-terminal
Hid1	PF12722.7	gi|297621834|ref|YP_003709971.1|	-	0.6	8.2	1.8	0.69	8.0	1.8	1.0	1	0	0	1	1	1	0	High-temperature-induced	dauer-formation	protein
SDA1	PF05285.12	gi|297621834|ref|YP_003709971.1|	-	0.61	9.5	27.9	0.73	9.2	27.9	1.0	1	0	0	1	1	1	0	SDA1
DUF2151	PF10221.9	gi|297621834|ref|YP_003709971.1|	-	1	7.8	3.5	1.1	7.7	3.5	1.0	1	0	0	1	1	1	0	Cell	cycle	and	development	regulator
Lin-8	PF03353.15	gi|297621834|ref|YP_003709971.1|	-	1.5	8.3	11.9	1.7	8.1	11.9	1.1	1	0	0	1	1	1	0	Ras-mediated	vulval-induction	antagonist
Tim54	PF11711.8	gi|297621834|ref|YP_003709971.1|	-	2	7.1	5.9	2.4	6.9	5.9	1.1	1	0	0	1	1	1	0	Inner	membrane	protein	import	complex	subunit	Tim54
RPN2_C	PF18004.1	gi|297621834|ref|YP_003709971.1|	-	3.3	7.6	12.3	4.7	7.1	12.3	1.3	1	0	0	1	1	1	0	26S	proteasome	regulatory	subunit	RPN2	C-terminal	domain
Nop14	PF04147.12	gi|297621834|ref|YP_003709971.1|	-	6.2	4.9	31.4	7.3	4.7	31.4	1.0	1	0	0	1	1	1	0	Nop14-like	family
Pes-10	PF07149.11	gi|297621834|ref|YP_003709971.1|	-	9.7	5.1	36.6	13	4.7	36.6	1.1	1	0	0	1	1	1	0	Pes-10
Pkinase	PF00069.25	gi|297621835|ref|YP_003709972.1|	-	7.2e-42	143.6	0.0	1.1e-41	143.0	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|297621835|ref|YP_003709972.1|	-	2.1e-33	115.7	0.0	1.5e-32	112.9	0.0	2.1	2	0	0	2	2	2	1	Protein	tyrosine	kinase
SpoIIE	PF07228.12	gi|297621835|ref|YP_003709972.1|	-	5.2e-07	29.8	0.0	2.5e-06	27.5	0.0	2.0	1	1	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
APH	PF01636.23	gi|297621835|ref|YP_003709972.1|	-	5.5e-06	26.5	0.0	0.0016	18.4	0.0	2.2	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.14	gi|297621835|ref|YP_003709972.1|	-	4.6e-05	22.9	0.0	8e-05	22.1	0.0	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Kinase-like	PF14531.6	gi|297621835|ref|YP_003709972.1|	-	0.0054	16.1	0.0	0.0087	15.4	0.0	1.4	1	0	0	1	1	1	1	Kinase-like
Haspin_kinase	PF12330.8	gi|297621835|ref|YP_003709972.1|	-	0.013	14.4	0.0	0.022	13.7	0.0	1.3	1	0	0	1	1	1	0	Haspin	like	kinase	domain
Pkinase_fungal	PF17667.1	gi|297621835|ref|YP_003709972.1|	-	0.02	13.7	0.0	0.028	13.2	0.0	1.1	1	0	0	1	1	1	0	Fungal	protein	kinase
Seadorna_VP7	PF07387.11	gi|297621835|ref|YP_003709972.1|	-	0.033	13.2	0.3	0.15	11.1	0.0	1.9	2	0	0	2	2	2	0	Seadornavirus	VP7
RIO1	PF01163.22	gi|297621835|ref|YP_003709972.1|	-	0.057	13.0	0.0	0.097	12.3	0.0	1.3	1	0	0	1	1	1	0	RIO1	family
Choline_kinase	PF01633.20	gi|297621835|ref|YP_003709972.1|	-	0.077	12.6	0.0	0.93	9.0	0.0	2.4	2	1	1	3	3	3	0	Choline/ethanolamine	kinase
Secretin	PF00263.21	gi|297621836|ref|YP_003709973.1|	-	1.7e-35	122.2	4.2	3.9e-35	121.0	4.2	1.6	1	0	0	1	1	1	1	Bacterial	type	II	and	III	secretion	system	protein
Secretin_N	PF03958.17	gi|297621836|ref|YP_003709973.1|	-	2.5e-13	50.2	2.1	0.00071	19.9	0.0	4.2	3	0	0	3	3	3	3	Bacterial	type	II/III	secretion	system	short	domain
TPR_19	PF14559.6	gi|297621837|ref|YP_003709974.1|	-	0.0018	18.8	0.1	1.2	9.7	0.0	3.2	1	1	2	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|297621837|ref|YP_003709974.1|	-	0.18	12.7	1.7	6.1	7.9	0.3	3.2	2	2	1	3	3	3	0	Tetratricopeptide	repeat
YidD	PF01809.18	gi|297621838|ref|YP_003709975.1|	-	4.6e-10	39.2	0.0	1e-09	38.1	0.0	1.6	1	0	0	1	1	1	1	Putative	membrane	protein	insertion	efficiency	factor
Sulfate_transp	PF00916.20	gi|297621839|ref|YP_003709976.1|	-	7.6e-68	229.0	29.2	1e-67	228.6	29.2	1.1	1	0	0	1	1	1	1	Sulfate	permease	family
STAS	PF01740.21	gi|297621839|ref|YP_003709976.1|	-	2e-08	33.9	0.1	4.3e-08	32.8	0.1	1.4	1	0	0	1	1	1	1	STAS	domain
MMR_HSR1	PF01926.23	gi|297621840|ref|YP_003709977.1|	-	1.4e-51	173.4	0.1	1.8e-25	89.2	0.0	2.2	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
KH_dom-like	PF14714.6	gi|297621840|ref|YP_003709977.1|	-	1.2e-28	99.2	0.5	2.6e-28	98.2	0.5	1.6	1	0	0	1	1	1	1	KH-domain-like	of	EngA	bacterial	GTPase	enzymes,	C-terminal
FeoB_N	PF02421.18	gi|297621840|ref|YP_003709977.1|	-	2.9e-25	88.6	0.0	1.1e-13	51.0	0.0	2.3	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.27	gi|297621840|ref|YP_003709977.1|	-	6.2e-24	84.6	2.1	7.3e-10	38.7	0.1	5.5	4	2	0	4	4	4	3	Elongation	factor	Tu	GTP	binding	domain
Dynamin_N	PF00350.23	gi|297621840|ref|YP_003709977.1|	-	9.8e-15	55.0	0.2	6e-05	23.2	0.0	4.2	2	2	2	4	4	4	3	Dynamin	family
AIG1	PF04548.16	gi|297621840|ref|YP_003709977.1|	-	2e-11	43.6	0.0	0.00012	21.5	0.0	3.2	3	0	0	3	3	3	2	AIG1	family
RsgA_GTPase	PF03193.16	gi|297621840|ref|YP_003709977.1|	-	1.5e-09	38.0	0.1	0.037	13.9	0.0	4.8	4	1	0	4	4	4	3	RsgA	GTPase
Roc	PF08477.13	gi|297621840|ref|YP_003709977.1|	-	1.9e-08	34.5	0.0	0.0026	17.9	0.0	3.5	2	2	0	2	2	2	2	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Ras	PF00071.22	gi|297621840|ref|YP_003709977.1|	-	6.6e-08	32.3	0.0	0.0067	16.0	0.0	2.8	2	2	0	2	2	2	2	Ras	family
MMR_HSR1_Xtn	PF16897.5	gi|297621840|ref|YP_003709977.1|	-	1.3e-05	25.1	0.0	0.024	14.6	0.0	2.6	2	0	0	2	2	2	2	C-terminal	region	of	MMR_HSR1	domain
ABC_tran	PF00005.27	gi|297621840|ref|YP_003709977.1|	-	1.5e-05	25.5	0.0	0.26	11.8	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_24	PF13479.6	gi|297621840|ref|YP_003709977.1|	-	4.9e-05	23.2	0.0	0.34	10.6	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
TniB	PF05621.11	gi|297621840|ref|YP_003709977.1|	-	0.00022	20.7	0.0	0.21	11.0	0.0	2.7	2	1	0	2	2	2	2	Bacterial	TniB	protein
Arf	PF00025.21	gi|297621840|ref|YP_003709977.1|	-	0.00044	19.7	0.1	1.1	8.6	0.0	3.6	3	1	0	3	3	3	1	ADP-ribosylation	factor	family
AAA_18	PF13238.6	gi|297621840|ref|YP_003709977.1|	-	0.00052	20.6	0.0	0.1	13.2	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
cobW	PF02492.19	gi|297621840|ref|YP_003709977.1|	-	0.00054	19.6	0.9	0.066	12.8	0.1	3.4	3	1	1	4	4	4	1	CobW/HypB/UreG,	nucleotide-binding	domain
RNA_helicase	PF00910.22	gi|297621840|ref|YP_003709977.1|	-	0.00054	20.3	0.0	1.5	9.3	0.0	2.5	2	0	0	2	2	2	2	RNA	helicase
SRPRB	PF09439.10	gi|297621840|ref|YP_003709977.1|	-	0.002	17.6	0.0	0.18	11.2	0.0	2.6	2	0	0	2	2	2	1	Signal	recognition	particle	receptor	beta	subunit
NB-ARC	PF00931.22	gi|297621840|ref|YP_003709977.1|	-	0.0035	16.6	0.0	3.2	6.9	0.0	3.1	3	1	2	5	5	4	1	NB-ARC	domain
AAA_22	PF13401.6	gi|297621840|ref|YP_003709977.1|	-	0.0089	16.3	0.1	3.3	8.0	0.0	3.4	2	2	0	2	2	2	1	AAA	domain
PilJ_C	PF18223.1	gi|297621840|ref|YP_003709977.1|	-	0.022	15.2	0.0	0.042	14.3	0.0	1.4	1	0	0	1	1	1	0	Pili	PilJ	C-terminal	domain
NTPase_1	PF03266.15	gi|297621840|ref|YP_003709977.1|	-	0.029	14.3	0.0	9.9	6.0	0.0	2.9	3	0	0	3	3	2	0	NTPase
Gtr1_RagA	PF04670.12	gi|297621840|ref|YP_003709977.1|	-	0.047	13.1	0.1	6.6	6.0	0.0	2.7	3	0	0	3	3	3	0	Gtr1/RagA	G	protein	conserved	region
PduV-EutP	PF10662.9	gi|297621840|ref|YP_003709977.1|	-	0.059	13.1	0.2	24	4.7	0.0	3.5	3	1	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_28	PF13521.6	gi|297621840|ref|YP_003709977.1|	-	0.077	13.2	0.0	4.2	7.6	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.29	gi|297621840|ref|YP_003709977.1|	-	0.078	13.4	0.0	33	4.9	0.0	3.4	3	2	0	3	3	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MeaB	PF03308.16	gi|297621840|ref|YP_003709977.1|	-	0.092	11.7	0.0	17	4.3	0.0	3.0	3	0	0	3	3	3	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_29	PF13555.6	gi|297621840|ref|YP_003709977.1|	-	0.12	12.2	0.0	8.2	6.3	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
RHH_6	PF16762.5	gi|297621840|ref|YP_003709977.1|	-	0.14	12.8	0.0	11	6.7	0.0	2.5	2	0	0	2	2	2	0	Ribbon-helix-helix	domain
SNF2_N	PF00176.23	gi|297621841|ref|YP_003709978.1|	-	4.4e-52	176.9	0.0	6.9e-52	176.3	0.0	1.2	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_C	PF00271.31	gi|297621841|ref|YP_003709978.1|	-	8.2e-15	55.1	0.0	2.4e-14	53.6	0.0	1.9	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|297621841|ref|YP_003709978.1|	-	7.9e-07	29.2	0.0	1.4e-06	28.4	0.0	1.4	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
SWI2_SNF2	PF18766.1	gi|297621841|ref|YP_003709978.1|	-	0.00014	21.6	0.0	0.00028	20.6	0.0	1.5	1	0	0	1	1	1	1	SWI2/SNF2	ATPase
SWIM	PF04434.17	gi|297621841|ref|YP_003709978.1|	-	0.0084	15.8	0.6	0.017	14.8	0.6	1.6	1	0	0	1	1	1	1	SWIM	zinc	finger
AlaDh_PNT_C	PF01262.21	gi|297621842|ref|YP_003709979.1|	-	2.5e-82	275.3	1.6	3.1e-82	275.0	1.6	1.1	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
AlaDh_PNT_N	PF05222.15	gi|297621842|ref|YP_003709979.1|	-	7e-45	152.7	0.1	1.2e-44	151.9	0.1	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	N-terminal	domain
2-Hacid_dh_C	PF02826.19	gi|297621842|ref|YP_003709979.1|	-	1.6e-08	34.1	0.0	3e-08	33.2	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|297621842|ref|YP_003709979.1|	-	2.7e-06	27.5	0.1	6.4e-06	26.3	0.0	1.6	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox	PF00070.27	gi|297621842|ref|YP_003709979.1|	-	2.9e-06	27.8	0.1	6.9e-06	26.5	0.1	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|297621842|ref|YP_003709979.1|	-	3.3e-06	26.5	0.1	5.4e-06	25.9	0.1	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|297621842|ref|YP_003709979.1|	-	0.00079	18.6	0.2	0.0018	17.4	0.1	1.5	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.6	gi|297621842|ref|YP_003709979.1|	-	0.001	19.5	0.1	0.004	17.6	0.0	1.9	2	0	0	2	2	2	1	Putative	NAD(P)-binding
NAD_binding_2	PF03446.15	gi|297621842|ref|YP_003709979.1|	-	0.0016	18.6	0.2	0.012	15.8	0.1	2.1	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.18	gi|297621842|ref|YP_003709979.1|	-	0.0031	17.4	0.2	0.0063	16.4	0.1	1.6	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.18	gi|297621842|ref|YP_003709979.1|	-	0.047	14.0	0.1	0.14	12.4	0.0	1.9	2	0	0	2	2	2	0	TrkA-N	domain
Sacchrp_dh_NADP	PF03435.18	gi|297621842|ref|YP_003709979.1|	-	0.051	13.8	0.0	0.13	12.6	0.0	1.7	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
FAD_oxidored	PF12831.7	gi|297621842|ref|YP_003709979.1|	-	0.1	11.9	3.1	0.15	11.3	3.1	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
DAO	PF01266.24	gi|297621842|ref|YP_003709979.1|	-	0.16	11.5	3.8	0.28	10.7	3.3	1.6	1	1	1	2	2	2	0	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|297621842|ref|YP_003709979.1|	-	1.1	8.1	2.3	3.3	6.5	0.0	2.0	2	0	0	2	2	2	0	Tryptophan	halogenase
SMC_N	PF02463.19	gi|297621843|ref|YP_003709980.1|	-	4.3e-65	219.2	19.5	1.1e-64	217.8	19.5	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|297621843|ref|YP_003709980.1|	-	6.7e-12	45.8	4.0	2.1e-05	24.5	0.2	3.4	3	0	0	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|297621843|ref|YP_003709980.1|	-	4.7e-09	36.4	12.2	4.7e-09	36.4	12.2	4.4	2	2	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|297621843|ref|YP_003709980.1|	-	0.00026	20.7	0.0	0.00066	19.4	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|297621843|ref|YP_003709980.1|	-	0.0013	19.2	54.4	0.0013	19.2	54.4	6.9	2	2	1	3	3	3	1	AAA	domain
ABC_tran	PF00005.27	gi|297621843|ref|YP_003709980.1|	-	0.19	12.3	0.0	0.19	12.3	0.0	6.1	3	2	0	3	3	3	0	ABC	transporter
DUF2431	PF10354.9	gi|297621843|ref|YP_003709980.1|	-	0.19	12.0	2.6	0.42	10.9	0.1	2.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF2431)
tRNA-synt_2b	PF00587.25	gi|297621844|ref|YP_003709981.1|	-	3e-34	118.5	0.1	6.9e-34	117.4	0.0	1.5	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.22	gi|297621844|ref|YP_003709981.1|	-	1.3e-25	89.7	2.5	2.1e-25	89.1	2.5	1.3	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
Tropomyosin_1	PF12718.7	gi|297621844|ref|YP_003709981.1|	-	0.013	15.6	1.5	0.022	14.9	1.5	1.3	1	0	0	1	1	1	0	Tropomyosin	like
DUF4201	PF13870.6	gi|297621844|ref|YP_003709981.1|	-	0.03	14.0	1.3	0.057	13.2	1.3	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
FlaC_arch	PF05377.11	gi|297621844|ref|YP_003709981.1|	-	0.17	12.3	2.9	0.18	12.2	0.7	2.2	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
CENP-F_leu_zip	PF10473.9	gi|297621844|ref|YP_003709981.1|	-	1.2	9.1	5.8	0.38	10.8	1.1	2.1	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
PPR_long	PF17177.4	gi|297621846|ref|YP_003709983.1|	-	0.072	12.4	0.7	0.12	11.8	0.7	1.3	1	0	0	1	1	1	0	Pentacotripeptide-repeat	region	of	PRORP
VIT1	PF01988.19	gi|297621847|ref|YP_003709984.1|	-	6.6e-14	52.3	0.2	1.1e-13	51.6	0.1	1.3	1	1	0	1	1	1	1	VIT	family
E1-E2_ATPase	PF00122.20	gi|297621848|ref|YP_003709985.1|	-	4.4e-45	153.4	0.2	4.4e-45	153.4	0.2	1.8	2	0	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|297621848|ref|YP_003709985.1|	-	1.8e-39	136.2	0.0	3.2e-39	135.4	0.0	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|297621848|ref|YP_003709985.1|	-	0.034	13.9	0.1	0.26	11.0	0.2	2.1	2	0	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|297621848|ref|YP_003709985.1|	-	0.075	13.4	0.0	0.32	11.4	0.0	2.0	1	1	1	2	2	2	0	haloacid	dehalogenase-like	hydrolase
ELFV_dehydrog	PF00208.21	gi|297621849|ref|YP_003709986.1|	-	8.7e-33	114.0	0.0	1.8e-32	113.0	0.0	1.5	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Bac_GDH	PF05088.12	gi|297621849|ref|YP_003709986.1|	-	5.8e-22	77.2	0.0	2.8e-12	45.1	0.0	3.4	4	0	0	4	4	4	3	Bacterial	NAD-glutamate	dehydrogenase
cwf21	PF08312.12	gi|297621849|ref|YP_003709986.1|	-	1.5	9.0	3.8	2.6	8.2	1.4	2.5	2	0	0	2	2	2	0	cwf21	domain
DUF2018	PF09442.10	gi|297621849|ref|YP_003709986.1|	-	4.6	8.3	5.5	6.7	7.7	0.1	3.3	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF2018)
HrcA	PF01628.21	gi|297621850|ref|YP_003709987.1|	-	4.2e-33	115.1	0.0	9.6e-33	113.9	0.0	1.5	2	0	0	2	2	2	1	HrcA	protein	C	terminal	domain
HrcA_DNA-bdg	PF03444.15	gi|297621850|ref|YP_003709987.1|	-	0.083	12.5	0.0	0.19	11.4	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HTH_DeoR	PF08220.12	gi|297621850|ref|YP_003709987.1|	-	0.13	12.0	0.0	0.39	10.5	0.0	1.8	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
GrpE	PF01025.19	gi|297621851|ref|YP_003709988.1|	-	8.2e-47	158.9	0.6	1.1e-46	158.6	0.6	1.1	1	0	0	1	1	1	1	GrpE
Connexin43	PF03508.13	gi|297621851|ref|YP_003709988.1|	-	0.077	12.6	0.6	0.13	11.9	0.6	1.3	1	0	0	1	1	1	0	Gap	junction	alpha-1	protein	(Cx43)
HSP70	PF00012.20	gi|297621852|ref|YP_003709989.1|	-	5.9e-261	866.9	11.3	6.9e-261	866.7	11.3	1.0	1	0	0	1	1	1	1	Hsp70	protein
MreB_Mbl	PF06723.13	gi|297621852|ref|YP_003709989.1|	-	8.5e-17	61.0	2.1	1.8e-14	53.3	0.8	2.6	2	0	0	2	2	2	2	MreB/Mbl	protein
FGGY_C	PF02782.16	gi|297621852|ref|YP_003709989.1|	-	4.6e-05	23.2	0.0	9.5e-05	22.2	0.0	1.7	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
FtsA	PF14450.6	gi|297621852|ref|YP_003709989.1|	-	0.00023	21.5	4.5	0.4	11.1	0.0	3.6	3	2	0	3	3	3	2	Cell	division	protein	FtsA
DMRL_synthase	PF00885.19	gi|297621852|ref|YP_003709989.1|	-	0.029	14.2	0.6	0.073	12.9	0.2	1.9	2	0	0	2	2	2	0	6,7-dimethyl-8-ribityllumazine	synthase
Hydantoinase_A	PF01968.18	gi|297621852|ref|YP_003709989.1|	-	0.034	13.4	2.6	0.8	8.9	0.1	3.2	3	0	0	3	3	3	0	Hydantoinase/oxoprolinase
DUF3347	PF11827.8	gi|297621852|ref|YP_003709989.1|	-	3.4	7.8	7.9	7.2	6.8	7.9	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3347)
HIP1_clath_bdg	PF16515.5	gi|297621852|ref|YP_003709989.1|	-	5.8	7.6	15.3	7.2	7.3	9.1	2.7	2	0	0	2	2	2	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
TPP_enzyme_N	PF02776.18	gi|297621853|ref|YP_003709990.1|	-	1.8e-33	115.5	0.0	7.4e-33	113.6	0.0	2.0	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|297621853|ref|YP_003709990.1|	-	1.6e-26	92.9	0.4	4.3e-26	91.5	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|297621853|ref|YP_003709990.1|	-	5.9e-23	81.1	0.0	4.4e-22	78.3	0.0	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
CO_dh	PF02552.16	gi|297621853|ref|YP_003709990.1|	-	0.051	13.3	0.0	0.1	12.4	0.0	1.5	1	0	0	1	1	1	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
YmdB	PF13277.6	gi|297621853|ref|YP_003709990.1|	-	0.085	12.2	0.1	0.15	11.4	0.1	1.4	1	0	0	1	1	1	0	YmdB-like	protein
AAA_5	PF07728.14	gi|297621853|ref|YP_003709990.1|	-	0.14	12.2	0.0	0.37	10.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
SlyX	PF04102.12	gi|297621854|ref|YP_003709991.1|	-	0.21	12.3	1.7	7.2	7.3	0.2	4.5	3	0	0	3	3	3	0	SlyX
DUF998	PF06197.13	gi|297621854|ref|YP_003709991.1|	-	0.31	10.6	7.4	0.49	10.0	7.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF998)
Peptidase_S66	PF02016.15	gi|297621855|ref|YP_003709992.1|	-	7.6e-42	142.2	0.0	1.2e-41	141.6	0.0	1.3	1	0	0	1	1	1	1	LD-carboxypeptidase	N-terminal	domain
Peptidase_S66C	PF17676.1	gi|297621855|ref|YP_003709992.1|	-	3.3e-33	114.8	0.0	5.1e-33	114.3	0.0	1.3	1	0	0	1	1	1	1	LD-carboxypeptidase	C-terminal	domain
HTH_36	PF13730.6	gi|297621855|ref|YP_003709992.1|	-	0.11	12.4	0.0	0.27	11.2	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF202	PF02656.15	gi|297621856|ref|YP_003709993.1|	-	6.7e-13	48.9	1.9	6.7e-13	48.9	1.9	2.0	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF202)
YrhC	PF14143.6	gi|297621856|ref|YP_003709993.1|	-	0.81	9.8	3.6	6.5	6.9	0.2	2.1	1	1	1	2	2	2	0	YrhC-like	protein
FKBP_C	PF00254.28	gi|297621857|ref|YP_003709994.1|	-	1.3e-21	76.7	0.0	6.3e-21	74.5	0.0	1.9	2	0	0	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
FKBP_N	PF01346.18	gi|297621857|ref|YP_003709994.1|	-	9.9e-08	32.8	0.4	9.9e-08	32.8	0.4	1.8	2	0	0	2	2	2	1	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
DUF5061	PF16587.5	gi|297621857|ref|YP_003709994.1|	-	0.015	15.3	0.0	0.031	14.3	0.0	1.4	1	0	0	1	1	1	0	17	kDa	common-antigen	outer	membrane	protein
Peptidase_S49	PF01343.18	gi|297621858|ref|YP_003709995.1|	-	1.8e-28	99.4	0.0	3.1e-28	98.7	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	S49
CLP_protease	PF00574.23	gi|297621858|ref|YP_003709995.1|	-	0.00072	19.5	0.1	0.0011	18.9	0.1	1.4	1	0	0	1	1	1	1	Clp	protease
SDH_sah	PF01972.16	gi|297621858|ref|YP_003709995.1|	-	0.0048	15.9	0.0	0.008	15.2	0.0	1.3	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
ECH_1	PF00378.20	gi|297621858|ref|YP_003709995.1|	-	0.023	14.0	0.1	0.035	13.4	0.1	1.2	1	0	0	1	1	1	0	Enoyl-CoA	hydratase/isomerase
DNA_pol_A	PF00476.20	gi|297621859|ref|YP_003709996.1|	-	1.3e-144	481.9	0.0	2.2e-144	481.2	0.0	1.3	1	0	0	1	1	1	1	DNA	polymerase	family	A
5_3_exonuc_N	PF02739.16	gi|297621859|ref|YP_003709996.1|	-	2.1e-47	161.0	0.0	4.5e-47	159.9	0.0	1.6	1	0	0	1	1	1	1	5'-3'	exonuclease,	N-terminal	resolvase-like	domain
DNA_pol_A_exo1	PF01612.20	gi|297621859|ref|YP_003709996.1|	-	4.1e-30	104.8	0.1	7e-30	104.0	0.1	1.4	1	0	0	1	1	1	1	3'-5'	exonuclease
5_3_exonuc	PF01367.20	gi|297621859|ref|YP_003709996.1|	-	9.5e-25	87.0	0.0	5.3e-24	84.6	0.0	2.4	1	0	0	1	1	1	1	5'-3'	exonuclease,	C-terminal	SAM	fold
XPG_N	PF00752.17	gi|297621859|ref|YP_003709996.1|	-	0.072	13.6	0.0	0.38	11.2	0.0	2.4	1	0	0	1	1	1	0	XPG	N-terminal	domain
HHH_2	PF12826.7	gi|297621859|ref|YP_003709996.1|	-	0.091	12.9	0.1	8.5	6.6	0.0	3.3	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
DUF3073	PF11273.8	gi|297621859|ref|YP_003709996.1|	-	0.34	11.7	2.3	3.8	8.3	0.8	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3073)
CoaE	PF01121.20	gi|297621860|ref|YP_003709997.1|	-	2e-38	131.8	0.0	2.3e-38	131.6	0.0	1.0	1	0	0	1	1	1	1	Dephospho-CoA	kinase
Rho_RNA_bind	PF07497.12	gi|297621861|ref|YP_003709998.1|	-	1.5e-32	111.3	0.0	3.1e-32	110.2	0.0	1.6	1	0	0	1	1	1	1	Rho	termination	factor,	RNA-binding	domain
ATP-synt_ab	PF00006.25	gi|297621861|ref|YP_003709998.1|	-	9.1e-25	87.6	0.0	1.4e-24	87.0	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Rho_N	PF07498.12	gi|297621861|ref|YP_003709998.1|	-	3.3e-09	36.5	0.0	1.5e-08	34.4	0.0	2.2	2	0	0	2	2	2	1	Rho	termination	factor,	N-terminal	domain
AAA	PF00004.29	gi|297621861|ref|YP_003709998.1|	-	0.00055	20.4	0.0	0.0013	19.2	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.6	gi|297621861|ref|YP_003709998.1|	-	0.0047	16.5	0.1	0.021	14.4	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
OB_RNB	PF08206.11	gi|297621861|ref|YP_003709998.1|	-	0.01	15.5	0.0	0.02	14.5	0.0	1.5	1	0	0	1	1	1	0	Ribonuclease	B	OB	domain
NACHT	PF05729.12	gi|297621861|ref|YP_003709998.1|	-	0.031	14.2	0.0	0.061	13.2	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_22	PF13401.6	gi|297621861|ref|YP_003709998.1|	-	0.09	13.0	0.0	0.26	11.6	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Mor	PF08765.11	gi|297621861|ref|YP_003709998.1|	-	0.14	12.2	0.0	0.48	10.4	0.0	1.9	1	0	0	1	1	1	0	Mor	transcription	activator	family
DUF5364	PF17322.2	gi|297621861|ref|YP_003709998.1|	-	2.1	8.6	5.2	0.3	11.4	1.3	1.5	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5364)
RNA_pol_Rpb1_6	PF04992.14	gi|297621862|ref|YP_003709999.1|	-	0.059	13.2	0.0	0.096	12.5	0.0	1.3	1	0	0	1	1	1	0	RNA	polymerase	Rpb1,	domain	6
GTP1_OBG	PF01018.22	gi|297621863|ref|YP_003710000.1|	-	2.7e-59	199.2	2.7	3.5e-59	198.8	2.7	1.1	1	0	0	1	1	1	1	GTP1/OBG
MMR_HSR1	PF01926.23	gi|297621863|ref|YP_003710000.1|	-	7.3e-24	84.0	0.0	1.1e-23	83.5	0.0	1.2	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|297621863|ref|YP_003710000.1|	-	5e-11	42.4	0.0	1.7e-10	40.6	0.0	1.8	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
Arf	PF00025.21	gi|297621863|ref|YP_003710000.1|	-	0.0025	17.3	0.0	0.007	15.8	0.0	1.7	1	1	0	1	1	1	1	ADP-ribosylation	factor	family
RsgA_GTPase	PF03193.16	gi|297621863|ref|YP_003710000.1|	-	0.0087	16.0	0.0	0.78	9.6	0.0	2.3	2	0	0	2	2	2	1	RsgA	GTPase
MeaB	PF03308.16	gi|297621863|ref|YP_003710000.1|	-	0.0097	14.9	0.0	0.12	11.3	0.1	2.1	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Gtr1_RagA	PF04670.12	gi|297621863|ref|YP_003710000.1|	-	0.051	12.9	0.0	0.071	12.5	0.0	1.2	1	0	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
Dynamin_N	PF00350.23	gi|297621863|ref|YP_003710000.1|	-	0.067	13.2	0.1	4.5	7.3	0.2	2.2	1	1	1	2	2	2	0	Dynamin	family
NOG1	PF06858.14	gi|297621863|ref|YP_003710000.1|	-	0.086	12.6	0.0	0.19	11.5	0.0	1.6	1	0	0	1	1	1	0	Nucleolar	GTP-binding	protein	1	(NOG1)
ABC_tran	PF00005.27	gi|297621863|ref|YP_003710000.1|	-	0.13	12.8	0.2	0.46	11.0	0.1	1.9	2	0	0	2	2	2	0	ABC	transporter
cobW	PF02492.19	gi|297621863|ref|YP_003710000.1|	-	0.14	11.7	0.0	6.4	6.3	0.1	2.2	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Ribosomal_L27	PF01016.19	gi|297621864|ref|YP_003710001.1|	-	8.5e-37	125.0	2.5	9.4e-37	124.9	2.5	1.0	1	0	0	1	1	1	1	Ribosomal	L27	protein
Ribosomal_L21p	PF00829.21	gi|297621865|ref|YP_003710002.1|	-	3.4e-33	113.9	0.1	3.4e-33	113.9	0.1	1.8	2	0	0	2	2	2	1	Ribosomal	prokaryotic	L21	protein
2-Hacid_dh_C	PF02826.19	gi|297621866|ref|YP_003710003.1|	-	2e-27	95.7	0.0	2.7e-27	95.3	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.15	gi|297621866|ref|YP_003710003.1|	-	0.015	15.5	0.0	0.029	14.5	0.0	1.4	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AlaDh_PNT_C	PF01262.21	gi|297621866|ref|YP_003710003.1|	-	0.051	12.9	0.0	0.13	11.5	0.0	1.6	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
IlvN	PF07991.12	gi|297621866|ref|YP_003710003.1|	-	0.091	12.3	0.0	0.31	10.6	0.0	1.8	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
IMPDH	PF00478.25	gi|297621868|ref|YP_003710005.1|	-	5.8e-129	430.0	0.1	6.7e-129	429.8	0.1	1.0	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
NMO	PF03060.15	gi|297621868|ref|YP_003710005.1|	-	1.3e-14	54.4	0.9	5.8e-09	35.8	0.9	2.1	2	0	0	2	2	2	2	Nitronate	monooxygenase
CBS	PF00571.28	gi|297621868|ref|YP_003710005.1|	-	9.8e-12	45.1	0.1	4.6e-05	23.8	0.0	3.0	3	0	0	3	3	3	2	CBS	domain
FMN_dh	PF01070.18	gi|297621868|ref|YP_003710005.1|	-	1.4e-11	44.0	1.3	2.5e-11	43.2	1.3	1.4	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
His_biosynth	PF00977.21	gi|297621868|ref|YP_003710005.1|	-	8.9e-06	25.3	0.6	0.0011	18.5	0.1	2.3	1	1	1	2	2	2	1	Histidine	biosynthesis	protein
ThiG	PF05690.14	gi|297621868|ref|YP_003710005.1|	-	9.8e-06	25.1	1.0	2.1e-05	24.0	1.0	1.5	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
Glu_synthase	PF01645.17	gi|297621868|ref|YP_003710005.1|	-	0.00034	19.9	2.5	0.00054	19.2	2.5	1.2	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
G3P_antiterm	PF04309.12	gi|297621868|ref|YP_003710005.1|	-	0.0092	15.4	0.3	0.69	9.3	0.1	2.3	2	0	0	2	2	2	1	Glycerol-3-phosphate	responsive	antiterminator
DHO_dh	PF01180.21	gi|297621868|ref|YP_003710005.1|	-	0.058	12.6	1.6	0.087	12.0	0.5	1.7	1	1	1	2	2	2	0	Dihydroorotate	dehydrogenase
DUF561	PF04481.12	gi|297621868|ref|YP_003710005.1|	-	0.061	12.5	0.4	0.11	11.7	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
NanE	PF04131.14	gi|297621868|ref|YP_003710005.1|	-	0.074	12.2	0.3	0.14	11.3	0.3	1.4	1	0	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
Dus	PF01207.17	gi|297621868|ref|YP_003710005.1|	-	0.15	11.1	0.1	0.3	10.1	0.1	1.4	1	1	0	1	1	1	0	Dihydrouridine	synthase	(Dus)
PcrB	PF01884.17	gi|297621868|ref|YP_003710005.1|	-	0.17	11.4	0.4	4.1	6.8	0.1	2.3	1	1	1	2	2	2	0	PcrB	family
AICARFT_IMPCHas	PF01808.18	gi|297621869|ref|YP_003710006.1|	-	7.4e-77	258.7	0.1	9.4e-77	258.4	0.1	1.1	1	0	0	1	1	1	1	AICARFT/IMPCHase	bienzyme
MGS	PF02142.22	gi|297621869|ref|YP_003710006.1|	-	2.6e-14	53.2	0.0	5.9e-14	52.0	0.0	1.7	1	0	0	1	1	1	1	MGS-like	domain
DUF4307	PF14155.6	gi|297621870|ref|YP_003710007.1|	-	0.11	12.3	0.4	7.5	6.4	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4307)
TIM	PF00121.18	gi|297621871|ref|YP_003710008.1|	-	9.4e-14	51.4	0.0	5.9e-09	35.6	0.0	2.7	2	1	0	2	2	2	2	Triosephosphate	isomerase
TPR_19	PF14559.6	gi|297621871|ref|YP_003710008.1|	-	1.3e-05	25.6	0.4	7.2e-05	23.2	0.1	2.2	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297621871|ref|YP_003710008.1|	-	0.00046	20.1	0.5	0.45	10.8	0.0	3.3	3	0	0	3	3	3	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|297621871|ref|YP_003710008.1|	-	0.12	12.7	0.1	10	6.4	0.0	2.7	2	0	0	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_9	PF13371.6	gi|297621871|ref|YP_003710008.1|	-	0.12	12.5	0.0	0.29	11.3	0.0	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297621871|ref|YP_003710008.1|	-	0.14	12.0	0.3	11	6.1	0.1	3.0	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297621871|ref|YP_003710008.1|	-	0.22	12.2	2.4	5.5	7.9	0.1	3.1	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297621871|ref|YP_003710008.1|	-	0.9	9.9	2.8	6.9	7.2	0.0	3.6	4	0	0	4	4	4	0	Tetratricopeptide	repeat
GMP_synt_C	PF00958.22	gi|297621872|ref|YP_003710009.1|	-	3.1e-43	145.7	0.0	5.3e-43	145.0	0.0	1.4	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
GATase	PF00117.28	gi|297621872|ref|YP_003710009.1|	-	1.4e-36	126.1	0.0	2.7e-36	125.1	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|297621872|ref|YP_003710009.1|	-	1.2e-10	41.5	0.6	7.4e-10	38.9	0.6	2.1	1	1	0	1	1	1	1	Peptidase	C26
NAD_synthase	PF02540.17	gi|297621872|ref|YP_003710009.1|	-	1e-07	31.3	0.0	2.1e-05	23.8	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
ThiI	PF02568.14	gi|297621872|ref|YP_003710009.1|	-	0.037	13.6	0.0	0.069	12.7	0.0	1.4	1	0	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
IPPT	PF01715.17	gi|297621872|ref|YP_003710009.1|	-	0.042	13.7	0.1	1.1	9.1	0.0	2.7	2	1	0	2	2	2	0	IPP	transferase
QueC	PF06508.13	gi|297621872|ref|YP_003710009.1|	-	0.098	12.1	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
Peptidase_M24	PF00557.24	gi|297621873|ref|YP_003710010.1|	-	9.7e-34	116.9	0.0	1.1e-33	116.7	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Peptidase_S41	PF03572.18	gi|297621878|ref|YP_003710015.1|	-	1.9e-42	144.6	2.2	3.7e-42	143.7	2.2	1.5	1	0	0	1	1	1	1	Peptidase	family	S41
TSP_NTD	PF17804.1	gi|297621878|ref|YP_003710015.1|	-	3.6e-37	128.5	10.0	3.6e-37	128.5	10.0	2.0	2	0	0	2	2	2	1	Tail	specific	protease	N-terminal	domain
PDZ	PF00595.24	gi|297621878|ref|YP_003710015.1|	-	2.4e-12	47.0	2.2	2.4e-12	47.0	2.2	2.1	2	0	0	2	2	2	1	PDZ	domain
PDZ_6	PF17820.1	gi|297621878|ref|YP_003710015.1|	-	5e-11	42.3	0.1	1.2e-10	41.0	0.1	1.8	1	0	0	1	1	1	1	PDZ	domain
PDZ_2	PF13180.6	gi|297621878|ref|YP_003710015.1|	-	4.1e-09	36.7	1.2	1e-08	35.4	1.2	1.7	1	0	0	1	1	1	1	PDZ	domain
Tricorn_PDZ	PF14685.6	gi|297621878|ref|YP_003710015.1|	-	0.024	14.6	0.3	0.095	12.7	0.2	2.1	2	0	0	2	2	2	0	Tricorn	protease	PDZ	domain
DUF3340	PF11818.8	gi|297621878|ref|YP_003710015.1|	-	0.076	13.2	8.8	0.24	11.5	0.5	3.1	2	1	1	3	3	3	0	C-terminal	domain	of	tail	specific	protease	(DUF3340)
SMC_ScpA	PF02616.14	gi|297621879|ref|YP_003710016.1|	-	4e-23	82.6	4.1	9.7e-23	81.3	4.1	1.5	1	1	0	1	1	1	1	Segregation	and	condensation	protein	ScpA
SMC_ScpB	PF04079.16	gi|297621880|ref|YP_003710017.1|	-	2.5e-54	183.2	0.1	2.9e-54	183.0	0.1	1.0	1	0	0	1	1	1	1	Segregation	and	condensation	complex	subunit	ScpB
Arteri_Gl	PF00951.18	gi|297621880|ref|YP_003710017.1|	-	0.13	12.1	0.0	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Arterivirus	GL	envelope	glycoprotein
TrkH	PF02386.16	gi|297621882|ref|YP_003710019.1|	-	2e-51	175.0	30.5	1.9e-46	158.6	29.3	2.8	1	1	1	2	2	2	2	Cation	transport	protein
Form-deh_trans	PF09163.11	gi|297621882|ref|YP_003710019.1|	-	0.28	11.0	2.3	0.64	9.8	2.3	1.6	1	0	0	1	1	1	0	Formate	dehydrogenase	N,	transmembrane
ABC-3	PF00950.17	gi|297621883|ref|YP_003710020.1|	-	4.4e-43	147.6	35.9	6.7e-43	147.0	35.9	1.2	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.18	gi|297621883|ref|YP_003710020.1|	-	5.3e-08	32.2	37.4	5.3e-08	32.2	37.4	1.9	1	1	1	2	2	2	1	FecCD	transport	family
Fun_ATP-synt_8	PF05933.13	gi|297621883|ref|YP_003710020.1|	-	0.061	13.5	0.3	0.061	13.5	0.3	3.6	4	0	0	4	4	4	0	Fungal	ATP	synthase	protein	8	(A6L)
ABC-3	PF00950.17	gi|297621884|ref|YP_003710021.1|	-	3.7e-49	167.6	24.7	9.2e-49	166.3	24.7	1.6	1	1	0	1	1	1	1	ABC	3	transport	family
Fe_dep_repr_C	PF02742.15	gi|297621884|ref|YP_003710021.1|	-	2.7e-22	78.6	0.6	2.7e-22	78.6	0.6	1.6	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
FecCD	PF01032.18	gi|297621884|ref|YP_003710021.1|	-	6.3e-14	51.7	20.4	6.3e-14	51.7	20.4	1.6	1	1	1	2	2	2	1	FecCD	transport	family
ABC_tran	PF00005.27	gi|297621885|ref|YP_003710022.1|	-	3.7e-30	105.2	0.0	5.3e-30	104.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|297621885|ref|YP_003710022.1|	-	2.5e-07	30.8	0.8	0.00011	22.1	0.3	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|297621885|ref|YP_003710022.1|	-	3.7e-05	23.3	0.2	0.12	11.8	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|297621885|ref|YP_003710022.1|	-	0.0049	16.6	0.0	0.0094	15.7	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|297621885|ref|YP_003710022.1|	-	0.014	15.9	1.4	0.028	14.9	1.4	1.4	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.15	gi|297621885|ref|YP_003710022.1|	-	0.019	14.9	0.3	1.3	8.9	0.0	2.2	2	0	0	2	2	2	0	NTPase
SbcCD_C	PF13558.6	gi|297621885|ref|YP_003710022.1|	-	0.026	14.7	0.2	0.41	10.9	0.1	2.4	2	1	0	2	2	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_24	PF13479.6	gi|297621885|ref|YP_003710022.1|	-	0.037	13.7	0.2	0.094	12.4	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.14	gi|297621885|ref|YP_003710022.1|	-	0.089	12.7	0.3	2.9	7.8	0.1	2.2	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATP_bind_1	PF03029.17	gi|297621885|ref|YP_003710022.1|	-	0.099	12.4	0.0	0.27	11.0	0.0	1.7	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_25	PF13481.6	gi|297621885|ref|YP_003710022.1|	-	0.13	11.8	1.0	0.75	9.3	0.0	2.4	3	0	0	3	3	3	0	AAA	domain
AAA_30	PF13604.6	gi|297621885|ref|YP_003710022.1|	-	0.14	11.8	0.1	0.3	10.8	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.6	gi|297621885|ref|YP_003710022.1|	-	0.16	12.0	0.2	5.6	7.0	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
cobW	PF02492.19	gi|297621885|ref|YP_003710022.1|	-	0.16	11.6	0.4	0.26	10.8	0.4	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
ZnuA	PF01297.17	gi|297621886|ref|YP_003710023.1|	-	1.7e-55	188.2	0.0	2e-55	188.0	0.0	1.0	1	0	0	1	1	1	1	Zinc-uptake	complex	component	A	periplasmic
DUF971	PF06155.12	gi|297621887|ref|YP_003710024.1|	-	4.4e-21	75.3	0.0	5.1e-21	75.1	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF971)
DUF2442	PF10387.9	gi|297621887|ref|YP_003710024.1|	-	0.0011	19.2	0.0	0.038	14.3	0.0	2.3	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF2442)
ParA	PF10609.9	gi|297621888|ref|YP_003710025.1|	-	1.2e-85	286.9	0.0	1.4e-85	286.6	0.0	1.0	1	0	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|297621888|ref|YP_003710025.1|	-	5.2e-15	55.6	0.0	7.7e-15	55.1	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|297621888|ref|YP_003710025.1|	-	8.2e-11	42.1	0.7	2.4e-08	34.1	0.1	2.1	2	0	0	2	2	2	2	AAA	domain
MipZ	PF09140.11	gi|297621888|ref|YP_003710025.1|	-	2.3e-08	33.6	0.0	3.1e-08	33.2	0.0	1.2	1	0	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.15	gi|297621888|ref|YP_003710025.1|	-	7.3e-06	25.4	1.8	0.00043	19.5	0.3	2.5	2	1	0	2	2	2	1	Anion-transporting	ATPase
AAA_26	PF13500.6	gi|297621888|ref|YP_003710025.1|	-	1.8e-05	24.7	0.2	0.14	12.0	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
Fer4_NifH	PF00142.18	gi|297621888|ref|YP_003710025.1|	-	2.5e-05	23.9	0.0	0.0022	17.5	0.1	2.2	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
CBP_BcsQ	PF06564.12	gi|297621888|ref|YP_003710025.1|	-	0.0016	18.0	0.3	0.53	9.7	0.2	2.1	2	0	0	2	2	2	2	Cellulose	biosynthesis	protein	BcsQ
VirC1	PF07015.11	gi|297621888|ref|YP_003710025.1|	-	0.0032	16.8	0.1	0.0059	15.9	0.1	1.4	1	0	0	1	1	1	1	VirC1	protein
AAA_25	PF13481.6	gi|297621888|ref|YP_003710025.1|	-	0.0089	15.6	0.1	0.017	14.7	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
APS_kinase	PF01583.20	gi|297621888|ref|YP_003710025.1|	-	0.017	15.0	0.0	0.026	14.4	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_18	PF13238.6	gi|297621888|ref|YP_003710025.1|	-	0.039	14.5	0.0	0.073	13.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MeaB	PF03308.16	gi|297621888|ref|YP_003710025.1|	-	0.086	11.8	0.1	0.13	11.2	0.1	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
SRP54	PF00448.22	gi|297621888|ref|YP_003710025.1|	-	0.1	12.2	0.2	0.21	11.2	0.2	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
CLP1_P	PF16575.5	gi|297621888|ref|YP_003710025.1|	-	0.11	12.3	0.1	0.21	11.3	0.1	1.4	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
SIS_2	PF13580.6	gi|297621888|ref|YP_003710025.1|	-	0.13	12.3	0.1	2.3	8.3	0.0	2.6	2	1	1	3	3	3	0	SIS	domain
NTPase_1	PF03266.15	gi|297621888|ref|YP_003710025.1|	-	0.14	12.0	0.1	0.28	11.1	0.1	1.4	1	0	0	1	1	1	0	NTPase
ArAE_1_C	PF11728.8	gi|297621889|ref|YP_003710026.1|	-	0.024	14.7	0.4	0.11	12.5	0.0	2.0	2	1	0	2	2	2	0	Putative	aromatic	acid	exporter	C-terminal	domain
YtfJ_HI0045	PF09695.10	gi|297621889|ref|YP_003710026.1|	-	0.032	13.9	0.1	0.17	11.5	0.0	1.9	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(YtfJ_HI0045)
CO_dh	PF02552.16	gi|297621889|ref|YP_003710026.1|	-	0.088	12.6	0.3	0.27	11.0	0.1	1.8	1	1	1	2	2	2	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
TLC	PF03219.14	gi|297621891|ref|YP_003710028.1|	-	1.5e-220	733.1	24.4	1.6e-220	733.0	24.4	1.0	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
SecD_SecF	PF02355.16	gi|297621893|ref|YP_003710030.1|	-	1.9e-77	258.9	30.8	7.9e-60	201.5	15.9	2.4	2	0	0	2	2	2	2	Protein	export	membrane	protein
MMPL	PF03176.15	gi|297621893|ref|YP_003710030.1|	-	2.5e-06	26.7	14.3	2.5e-06	26.7	14.3	2.5	2	0	0	2	2	2	1	MMPL	family
Sec_GG	PF07549.14	gi|297621893|ref|YP_003710030.1|	-	0.03	13.8	1.2	3.9	7.1	0.1	2.8	2	0	0	2	2	2	0	SecD/SecF	GG	Motif
DUF2894	PF11445.8	gi|297621893|ref|YP_003710030.1|	-	0.064	13.7	5.3	0.38	11.2	3.8	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2894)
RecJ_OB	PF17768.1	gi|297621894|ref|YP_003710031.1|	-	7e-19	68.1	0.0	1.8e-18	66.7	0.0	1.7	2	0	0	2	2	2	1	RecJ	OB	domain
DHHA1	PF02272.19	gi|297621894|ref|YP_003710031.1|	-	5.2e-18	65.8	0.0	1.5e-17	64.3	0.0	1.8	2	0	0	2	2	2	1	DHHA1	domain
DHH	PF01368.20	gi|297621894|ref|YP_003710031.1|	-	6.2e-10	39.2	0.0	1.2e-09	38.3	0.0	1.5	1	0	0	1	1	1	1	DHH	family
RcsC	PF09456.10	gi|297621894|ref|YP_003710031.1|	-	0.49	10.4	2.5	25	4.9	0.2	3.1	2	1	1	3	3	3	0	RcsC	Alpha-Beta-Loop	(ABL)
HTH_17	PF12728.7	gi|297621896|ref|YP_003710033.1|	-	6e-18	64.8	2.0	1.2e-09	38.2	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_28	PF13518.6	gi|297621896|ref|YP_003710033.1|	-	0.00032	20.8	0.7	0.0067	16.5	0.0	2.6	3	0	0	3	3	3	1	Helix-turn-helix	domain
MerR	PF00376.23	gi|297621896|ref|YP_003710033.1|	-	0.0011	18.7	0.0	0.39	10.5	0.0	3.0	3	0	0	3	3	3	1	MerR	family	regulatory	protein
HTH_23	PF13384.6	gi|297621896|ref|YP_003710033.1|	-	0.0011	18.6	0.0	0.15	11.9	0.0	2.5	2	0	0	2	2	2	1	Homeodomain-like	domain
MerR_1	PF13411.6	gi|297621896|ref|YP_003710033.1|	-	0.005	16.9	0.7	1.5	9.0	0.0	2.5	2	0	0	2	2	2	2	MerR	HTH	family	regulatory	protein
HTH_7	PF02796.15	gi|297621896|ref|YP_003710033.1|	-	0.012	15.6	0.6	1.9	8.7	0.1	2.7	2	1	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
HTH_29	PF13551.6	gi|297621896|ref|YP_003710033.1|	-	0.032	14.3	0.0	0.57	10.2	0.0	2.4	2	0	0	2	2	2	0	Winged	helix-turn	helix
Rrp40_N	PF18311.1	gi|297621896|ref|YP_003710033.1|	-	0.064	13.2	0.0	0.18	11.8	0.0	1.7	2	0	0	2	2	2	0	Exosome	complex	exonuclease	Rrp40	N-terminal	domain
HTH_Tnp_IS630	PF01710.16	gi|297621896|ref|YP_003710033.1|	-	0.095	12.7	4.0	0.2	11.7	3.7	1.8	1	1	0	1	1	1	0	Transposase
ETC_C1_NDUFA4	PF04800.12	gi|297621896|ref|YP_003710033.1|	-	0.1	12.8	0.5	11	6.4	0.0	2.2	2	0	0	2	2	2	0	ETC	complex	I	subunit	conserved	region
Peptidase_S41	PF03572.18	gi|297621897|ref|YP_003710034.1|	-	1e-40	139.1	0.3	1.8e-40	138.2	0.3	1.4	1	0	0	1	1	1	1	Peptidase	family	S41
TSP_NTD	PF17804.1	gi|297621897|ref|YP_003710034.1|	-	3.8e-26	92.5	3.5	3.8e-26	92.5	3.5	2.1	2	0	0	2	2	2	1	Tail	specific	protease	N-terminal	domain
PDZ_2	PF13180.6	gi|297621897|ref|YP_003710034.1|	-	2.3e-11	43.9	0.7	7e-11	42.3	0.7	1.9	1	0	0	1	1	1	1	PDZ	domain
PDZ	PF00595.24	gi|297621897|ref|YP_003710034.1|	-	1.1e-10	41.7	0.7	2.1e-10	40.8	0.7	1.5	1	0	0	1	1	1	1	PDZ	domain
PDZ_6	PF17820.1	gi|297621897|ref|YP_003710034.1|	-	1.3e-08	34.6	0.3	2.3e-08	33.7	0.3	1.5	1	0	0	1	1	1	1	PDZ	domain
DUF3340	PF11818.8	gi|297621897|ref|YP_003710034.1|	-	7.9e-05	22.9	19.7	0.027	14.6	3.7	4.7	2	2	1	3	3	3	2	C-terminal	domain	of	tail	specific	protease	(DUF3340)
Imm64	PF15600.6	gi|297621897|ref|YP_003710034.1|	-	0.0045	16.7	0.2	0.01	15.5	0.2	1.5	1	0	0	1	1	1	1	Immunity	protein	64
Tricorn_PDZ	PF14685.6	gi|297621897|ref|YP_003710034.1|	-	0.011	15.7	0.2	0.1	12.6	0.2	2.4	1	1	0	1	1	1	0	Tricorn	protease	PDZ	domain
tRNA-synt_1c	PF00749.21	gi|297621898|ref|YP_003710035.1|	-	6.7e-114	380.0	0.0	8.6e-114	379.6	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1b	PF00579.25	gi|297621898|ref|YP_003710035.1|	-	0.12	11.6	0.0	2.4	7.4	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(W	and	Y)
Put_DNA-bind_N	PF06971.13	gi|297621898|ref|YP_003710035.1|	-	0.15	12.1	0.1	0.65	10.1	0.0	2.2	3	0	0	3	3	3	0	Putative	DNA-binding	protein	N-terminus
Raffinose_syn	PF05691.12	gi|297621899|ref|YP_003710036.1|	-	1.7e-18	65.9	0.4	1.6e-05	22.9	0.0	3.2	2	1	1	3	3	3	3	Raffinose	synthase	or	seed	imbibition	protein	Sip1
Melibiase	PF02065.18	gi|297621899|ref|YP_003710036.1|	-	0.13	11.2	0.0	0.21	10.5	0.0	1.2	1	0	0	1	1	1	0	Melibiase
SNARE_assoc	PF09335.11	gi|297621900|ref|YP_003710037.1|	-	2.4e-13	50.6	6.8	2.4e-13	50.6	6.8	2.5	1	1	1	2	2	2	2	SNARE	associated	Golgi	protein
CDP-OH_P_transf	PF01066.21	gi|297621901|ref|YP_003710038.1|	-	1.9e-13	51.0	0.7	1.9e-13	51.0	0.7	2.5	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
Transposase_mut	PF00872.18	gi|297621902|ref|YP_003710039.1|	-	1.6e-71	241.2	0.0	1.9e-71	240.9	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297621902|ref|YP_003710039.1|	-	1.4e-05	25.4	0.0	5e-05	23.6	0.0	2.0	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.6	gi|297621902|ref|YP_003710039.1|	-	0.028	14.7	0.2	0.27	11.5	0.0	2.7	2	1	0	2	2	2	0	DDE	domain
DNA_methylase	PF00145.17	gi|297621903|ref|YP_003710040.1|	-	3.5e-86	289.6	0.0	4.1e-86	289.4	0.0	1.1	1	0	0	1	1	1	1	C-5	cytosine-specific	DNA	methylase
MerR_1	PF13411.6	gi|297621903|ref|YP_003710040.1|	-	0.00018	21.5	0.0	0.0012	18.9	0.0	2.2	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
MerR	PF00376.23	gi|297621903|ref|YP_003710040.1|	-	0.12	12.2	0.0	0.29	10.9	0.0	1.6	1	0	0	1	1	1	0	MerR	family	regulatory	protein
RE_Eco47II	PF09553.10	gi|297621904|ref|YP_003710041.1|	-	6.4e-87	290.4	4.9	8.1e-87	290.0	4.9	1.1	1	0	0	1	1	1	1	Eco47II	restriction	endonuclease
UPF0102	PF02021.17	gi|297621904|ref|YP_003710041.1|	-	0.00024	21.3	0.1	0.069	13.4	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	protein	family	UPF0102
Transposase_mut	PF00872.18	gi|297621905|ref|YP_003710042.1|	-	2.2e-46	158.4	0.0	2.6e-46	158.2	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297621905|ref|YP_003710042.1|	-	2.2e-05	24.8	0.0	3.7e-05	24.0	0.0	1.5	1	0	0	1	1	1	1	MULE	transposase	domain
HTH_Tnp_1	PF01527.20	gi|297621906|ref|YP_003710043.1|	-	2.3e-19	69.5	0.2	2.8e-19	69.2	0.2	1.1	1	0	0	1	1	1	1	Transposase
HTH_23	PF13384.6	gi|297621906|ref|YP_003710043.1|	-	3e-06	26.8	0.0	6.2e-06	25.8	0.0	1.6	1	1	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297621906|ref|YP_003710043.1|	-	4.3e-05	23.6	0.0	7.2e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_IS630	PF01710.16	gi|297621906|ref|YP_003710043.1|	-	0.00017	21.6	0.3	0.0002	21.4	0.3	1.1	1	0	0	1	1	1	1	Transposase
HTH_Tnp_1_2	PF13022.6	gi|297621906|ref|YP_003710043.1|	-	0.0004	20.5	0.3	0.00065	19.9	0.3	1.4	1	1	0	1	1	1	1	Helix-turn-helix	of	insertion	element	transposase
HTH_29	PF13551.6	gi|297621906|ref|YP_003710043.1|	-	0.00082	19.3	0.1	0.0016	18.4	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
DUF1153	PF06627.11	gi|297621906|ref|YP_003710043.1|	-	0.0019	18.3	0.1	0.0031	17.6	0.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1153)
HTH_17	PF12728.7	gi|297621906|ref|YP_003710043.1|	-	0.0043	17.2	0.1	0.0084	16.3	0.0	1.7	2	1	0	2	2	2	1	Helix-turn-helix	domain
CreD	PF06123.12	gi|297621906|ref|YP_003710043.1|	-	0.024	13.5	0.1	0.024	13.4	0.1	1.0	1	0	0	1	1	1	0	Inner	membrane	protein	CreD
NusG_add	PF18298.1	gi|297621906|ref|YP_003710043.1|	-	0.057	13.6	0.0	0.075	13.3	0.0	1.3	1	1	0	1	1	1	0	NusG	additional	domain
HTH_psq	PF05225.16	gi|297621906|ref|YP_003710043.1|	-	0.11	12.3	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
rve_3	PF13683.6	gi|297621907|ref|YP_003710044.1|	-	1.1e-28	98.8	0.0	2.8e-28	97.5	0.0	1.8	1	0	0	1	1	1	1	Integrase	core	domain
rve	PF00665.26	gi|297621907|ref|YP_003710044.1|	-	1.7e-24	86.3	0.0	4.2e-24	85.0	0.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297621907|ref|YP_003710044.1|	-	1.8e-12	47.2	6.8	2.8e-12	46.6	6.1	1.7	1	1	0	1	1	1	1	HTH-like	domain
DDE_Tnp_IS240	PF13610.6	gi|297621907|ref|YP_003710044.1|	-	0.0002	21.6	0.0	0.00047	20.4	0.0	1.7	1	0	0	1	1	1	1	DDE	domain
rve_2	PF13333.6	gi|297621907|ref|YP_003710044.1|	-	0.0021	18.2	0.0	0.006	16.7	0.0	1.8	2	0	0	2	2	2	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297621907|ref|YP_003710044.1|	-	0.026	15.1	2.8	0.045	14.4	0.2	2.6	1	1	1	2	2	2	0	Homeodomain-like	domain
EIIC-GAT	PF03611.14	gi|297621908|ref|YP_003710045.1|	-	0.017	14.2	0.6	0.017	14.2	0.6	1.4	1	1	0	1	1	1	0	PTS	system	sugar-specific	permease	component
Copper-fist	PF00649.18	gi|297621908|ref|YP_003710045.1|	-	0.083	12.4	0.5	0.25	10.9	0.1	1.9	2	0	0	2	2	2	0	Copper	fist	DNA	binding	domain
ATPase_gene1	PF09527.10	gi|297621908|ref|YP_003710045.1|	-	0.29	11.3	4.7	4.8	7.4	0.2	3.2	3	0	0	3	3	3	0	Putative	F0F1-ATPase	subunit	Ca2+/Mg2+	transporter
FUR	PF01475.19	gi|297621910|ref|YP_003710047.1|	-	1.4e-19	70.4	0.2	1.6e-19	70.2	0.2	1.1	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_24	PF13412.6	gi|297621910|ref|YP_003710047.1|	-	0.094	12.3	0.1	9.6	5.9	0.0	2.3	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
TLC	PF03219.14	gi|297621911|ref|YP_003710048.1|	-	5.8e-183	609.1	23.7	6.5e-183	608.9	23.7	1.0	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
Ldr_toxin	PF13940.6	gi|297621911|ref|YP_003710048.1|	-	0.68	10.0	8.6	2.2	8.4	0.7	2.8	2	0	0	2	2	2	0	Toxin	Ldr,	type	I	toxin-antitoxin	system
DUF4131	PF13567.6	gi|297621911|ref|YP_003710048.1|	-	3	7.5	12.7	0.12	12.0	1.1	3.4	4	1	0	4	4	4	0	Domain	of	unknown	function	(DUF4131)
TLC	PF03219.14	gi|297621912|ref|YP_003710049.1|	-	1.1e-199	664.3	28.0	1.3e-199	664.0	28.0	1.0	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
PGK	PF00162.19	gi|297621913|ref|YP_003710050.1|	-	2.2e-147	490.9	0.0	2.7e-147	490.7	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
SNO	PF01174.19	gi|297621914|ref|YP_003710051.1|	-	8.1e-47	159.5	0.0	1.1e-46	159.1	0.0	1.1	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.14	gi|297621914|ref|YP_003710051.1|	-	1e-08	35.0	0.0	2.2e-08	33.9	0.0	1.5	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|297621914|ref|YP_003710051.1|	-	0.00014	21.7	0.5	0.00093	19.0	0.5	2.0	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_S51	PF03575.17	gi|297621914|ref|YP_003710051.1|	-	0.014	15.0	0.0	0.019	14.6	0.0	1.2	1	0	0	1	1	1	0	Peptidase	family	S51
DJ-1_PfpI	PF01965.24	gi|297621914|ref|YP_003710051.1|	-	0.079	12.8	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	DJ-1/PfpI	family
SOR_SNZ	PF01680.17	gi|297621915|ref|YP_003710052.1|	-	1.7e-108	361.2	4.2	2.1e-108	360.8	4.2	1.1	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.14	gi|297621915|ref|YP_003710052.1|	-	8.7e-08	31.8	6.1	1.2e-05	24.8	0.6	2.6	1	1	2	3	3	3	2	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.15	gi|297621915|ref|YP_003710052.1|	-	0.00021	20.8	3.7	0.018	14.4	0.2	2.3	2	0	0	2	2	2	2	Nitronate	monooxygenase
IGPS	PF00218.21	gi|297621915|ref|YP_003710052.1|	-	0.00083	18.6	0.3	0.16	11.1	0.0	2.7	2	2	0	2	2	2	2	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.21	gi|297621915|ref|YP_003710052.1|	-	0.0025	17.3	0.2	0.052	13.0	0.0	2.3	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
NanE	PF04131.14	gi|297621915|ref|YP_003710052.1|	-	0.0046	16.2	1.2	0.032	13.4	0.0	2.5	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
Dus	PF01207.17	gi|297621915|ref|YP_003710052.1|	-	0.0071	15.5	0.5	2.4	7.2	0.1	2.5	2	1	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
TetR_C_27	PF17935.1	gi|297621915|ref|YP_003710052.1|	-	0.052	13.6	0.0	0.16	12.1	0.0	1.8	1	0	0	1	1	1	0	Tetracyclin	repressor-like,	C-terminal	domain
TMP-TENI	PF02581.17	gi|297621915|ref|YP_003710052.1|	-	0.061	12.6	0.6	3.9	6.8	0.1	2.4	2	0	0	2	2	2	0	Thiamine	monophosphate	synthase
OMPdecase	PF00215.24	gi|297621915|ref|YP_003710052.1|	-	0.097	12.3	0.7	0.43	10.1	0.3	2.2	2	1	0	2	2	2	0	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
RNase_T	PF00929.24	gi|297621916|ref|YP_003710053.1|	-	4.4e-33	115.1	0.2	5.8e-33	114.8	0.2	1.1	1	0	0	1	1	1	1	Exonuclease
QSregVF_b	PF12843.7	gi|297621916|ref|YP_003710053.1|	-	9.3e-07	28.7	0.0	2.2e-06	27.4	0.0	1.6	1	0	0	1	1	1	1	Putative	quorum-sensing-regulated	virulence	factor
RNase_H_2	PF13482.6	gi|297621916|ref|YP_003710053.1|	-	0.00015	21.8	0.0	0.00041	20.4	0.0	1.7	1	1	0	1	1	1	1	RNase_H	superfamily
DNA_pol_A_exo1	PF01612.20	gi|297621916|ref|YP_003710053.1|	-	0.0023	17.7	0.1	0.043	13.5	0.1	2.6	1	1	1	2	2	2	1	3'-5'	exonuclease
MMR_HSR1	PF01926.23	gi|297621917|ref|YP_003710054.1|	-	2.6e-20	72.6	0.0	3.7e-20	72.1	0.0	1.2	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
RsgA_GTPase	PF03193.16	gi|297621917|ref|YP_003710054.1|	-	2.4e-08	34.0	0.0	0.0019	18.1	0.0	2.1	2	0	0	2	2	2	2	RsgA	GTPase
FeoB_N	PF02421.18	gi|297621917|ref|YP_003710054.1|	-	5.2e-08	32.6	0.0	7e-08	32.1	0.0	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.23	gi|297621917|ref|YP_003710054.1|	-	1.6e-06	28.3	0.0	0.0051	16.9	0.2	2.2	1	1	1	2	2	2	2	Dynamin	family
Septin	PF00735.18	gi|297621917|ref|YP_003710054.1|	-	6.1e-05	22.4	0.2	0.18	11.0	0.1	2.5	1	1	0	2	2	2	2	Septin
GTP_EFTU	PF00009.27	gi|297621917|ref|YP_003710054.1|	-	9.8e-05	22.0	0.0	0.16	11.5	0.0	2.2	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
Roc	PF08477.13	gi|297621917|ref|YP_003710054.1|	-	0.0027	17.9	0.0	0.054	13.7	0.0	2.2	2	0	0	2	2	2	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AIG1	PF04548.16	gi|297621917|ref|YP_003710054.1|	-	0.0046	16.3	0.0	0.011	15.1	0.0	1.6	1	1	0	1	1	1	1	AIG1	family
SRPRB	PF09439.10	gi|297621917|ref|YP_003710054.1|	-	0.013	15.0	0.1	0.04	13.3	0.1	2.0	1	1	1	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
Ras	PF00071.22	gi|297621917|ref|YP_003710054.1|	-	0.037	13.6	0.1	1	9.0	0.0	2.4	2	1	0	2	2	2	0	Ras	family
PduV-EutP	PF10662.9	gi|297621917|ref|YP_003710054.1|	-	0.04	13.7	0.0	1.7	8.4	0.0	2.1	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
ATP_bind_1	PF03029.17	gi|297621917|ref|YP_003710054.1|	-	0.095	12.5	0.1	0.33	10.7	0.0	1.8	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
TsaE	PF02367.17	gi|297621918|ref|YP_003710055.1|	-	3.6e-36	123.9	0.0	4.2e-36	123.7	0.0	1.0	1	0	0	1	1	1	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_23	PF13476.6	gi|297621918|ref|YP_003710055.1|	-	0.0026	18.3	0.0	0.0026	18.3	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.22	gi|297621918|ref|YP_003710055.1|	-	0.0093	16.4	0.0	0.018	15.4	0.0	1.5	2	0	0	2	2	2	1	RNA	helicase
AAA_33	PF13671.6	gi|297621918|ref|YP_003710055.1|	-	0.044	14.0	0.1	0.08	13.1	0.0	1.7	2	1	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|297621918|ref|YP_003710055.1|	-	0.054	13.4	0.0	0.068	13.1	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_18	PF13238.6	gi|297621918|ref|YP_003710055.1|	-	0.069	13.7	0.0	0.083	13.4	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|297621918|ref|YP_003710055.1|	-	0.073	13.0	0.0	0.09	12.7	0.0	1.2	1	0	0	1	1	1	0	RsgA	GTPase
Viral_helicase1	PF01443.18	gi|297621918|ref|YP_003710055.1|	-	0.12	12.1	0.0	0.18	11.5	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_7	PF12775.7	gi|297621918|ref|YP_003710055.1|	-	0.13	11.8	0.0	0.18	11.3	0.0	1.2	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA	PF00004.29	gi|297621918|ref|YP_003710055.1|	-	0.13	12.7	0.0	0.17	12.3	0.0	1.2	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.27	gi|297621918|ref|YP_003710055.1|	-	0.17	12.4	0.0	0.26	11.8	0.0	1.2	1	0	0	1	1	1	0	ABC	transporter
AAA_24	PF13479.6	gi|297621918|ref|YP_003710055.1|	-	0.21	11.3	0.0	0.25	11.0	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
DUF2709	PF10915.8	gi|297621919|ref|YP_003710056.1|	-	1.3e-136	453.3	5.8	1.5e-136	453.2	5.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2709)
ELFV_dehydrog_N	PF02812.18	gi|297621920|ref|YP_003710057.1|	-	2.6e-20	72.6	0.0	4.8e-20	71.8	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
ELFV_dehydrog	PF00208.21	gi|297621920|ref|YP_003710057.1|	-	1e-14	54.9	0.0	2.1e-09	37.5	0.0	2.2	1	1	1	2	2	2	2	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
F420_oxidored	PF03807.17	gi|297621920|ref|YP_003710057.1|	-	0.022	15.3	0.1	0.79	10.4	0.0	2.4	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
3HCDH_N	PF02737.18	gi|297621920|ref|YP_003710057.1|	-	0.027	14.4	0.0	0.056	13.3	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|297621920|ref|YP_003710057.1|	-	0.092	12.1	0.0	0.18	11.2	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|297621920|ref|YP_003710057.1|	-	0.18	11.4	0.0	0.6	9.7	0.0	1.9	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
tRNA-synt_1d	PF00750.19	gi|297621921|ref|YP_003710058.1|	-	1.1e-118	396.2	0.0	1.4e-118	395.8	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.15	gi|297621921|ref|YP_003710058.1|	-	9.2e-31	106.5	0.4	1.9e-30	105.5	0.4	1.6	1	0	0	1	1	1	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.16	gi|297621921|ref|YP_003710058.1|	-	1e-24	86.9	0.2	3.8e-24	85.1	0.2	2.0	1	0	0	1	1	1	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1g	PF09334.11	gi|297621921|ref|YP_003710058.1|	-	0.012	14.4	0.0	0.019	13.7	0.0	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.22	gi|297621921|ref|YP_003710058.1|	-	0.058	11.6	0.0	0.11	10.8	0.0	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1e	PF01406.19	gi|297621921|ref|YP_003710058.1|	-	0.097	12.0	0.0	0.21	10.9	0.0	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(C)	catalytic	domain
E1-E2_ATPase	PF00122.20	gi|297621922|ref|YP_003710059.1|	-	9.2e-62	207.8	0.8	1.9e-61	206.8	0.8	1.5	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|297621922|ref|YP_003710059.1|	-	4.1e-39	135.1	1.6	4.1e-39	135.1	1.6	1.7	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.26	gi|297621922|ref|YP_003710059.1|	-	1.8e-15	57.1	0.4	7.4e-15	55.1	0.4	2.1	1	0	0	1	1	1	1	Heavy-metal-associated	domain
Hydrolase_3	PF08282.12	gi|297621922|ref|YP_003710059.1|	-	0.00012	21.9	1.1	0.0042	16.9	0.7	2.6	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
DUF1980	PF09323.10	gi|297621922|ref|YP_003710059.1|	-	0.016	15.1	0.4	0.76	9.7	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1980)
HAD	PF12710.7	gi|297621922|ref|YP_003710059.1|	-	0.087	13.2	0.0	0.24	11.8	0.0	1.8	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
ParBc	PF02195.18	gi|297621923|ref|YP_003710060.1|	-	1.6e-24	86.0	0.2	3.3e-24	85.0	0.2	1.6	1	0	0	1	1	1	1	ParB-like	nuclease	domain
HTH_ParB	PF17762.1	gi|297621923|ref|YP_003710060.1|	-	9.8e-15	54.1	3.9	2e-14	53.1	0.2	3.1	3	0	0	3	3	3	1	HTH	domain	found	in	ParB	protein
HTH_3	PF01381.22	gi|297621923|ref|YP_003710060.1|	-	9.1e-07	28.8	0.8	8.9e-05	22.5	0.0	3.6	4	0	0	4	4	4	1	Helix-turn-helix
HTH_19	PF12844.7	gi|297621923|ref|YP_003710060.1|	-	0.0015	18.5	0.1	0.0071	16.3	0.1	2.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
KorB	PF08535.10	gi|297621923|ref|YP_003710060.1|	-	0.007	16.4	0.0	0.032	14.3	0.0	2.1	2	0	0	2	2	2	1	KorB	domain
HTH_24	PF13412.6	gi|297621923|ref|YP_003710060.1|	-	0.0096	15.5	0.0	0.048	13.2	0.0	2.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_23	PF13384.6	gi|297621923|ref|YP_003710060.1|	-	0.011	15.5	0.0	0.09	12.6	0.0	2.4	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_31	PF13560.6	gi|297621923|ref|YP_003710060.1|	-	0.019	15.3	0.1	0.36	11.2	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|297621923|ref|YP_003710060.1|	-	0.038	13.7	0.0	0.69	9.6	0.0	2.7	2	1	0	2	2	2	0	Sigma-70,	region	4
HTH_37	PF13744.6	gi|297621923|ref|YP_003710060.1|	-	0.067	13.1	0.8	2.7	8.0	0.1	2.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
CCDC32	PF14989.6	gi|297621923|ref|YP_003710060.1|	-	0.082	12.9	0.2	0.18	11.8	0.2	1.6	1	0	0	1	1	1	0	Coiled-coil	domain	containing	32
NVEALA	PF14055.6	gi|297621924|ref|YP_003710061.1|	-	0.005	16.8	0.1	0.22	11.6	0.0	2.4	2	0	0	2	2	2	1	NVEALA	protein
HrpB1_HrpK	PF09613.10	gi|297621924|ref|YP_003710061.1|	-	0.089	12.4	0.9	1.3	8.6	0.1	2.7	2	1	1	3	3	3	0	Bacterial	type	III	secretion	protein	(HrpB1_HrpK)
Ni_hydr_CYTB	PF01292.20	gi|297621924|ref|YP_003710061.1|	-	0.19	11.3	0.0	0.37	10.4	0.0	1.5	1	0	0	1	1	1	0	Prokaryotic	cytochrome	b561
Topoisom_bac	PF01131.20	gi|297621926|ref|YP_003710063.1|	-	1.2e-123	413.2	0.8	1.7e-123	412.7	0.8	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
zf-C4_Topoisom	PF01396.19	gi|297621926|ref|YP_003710063.1|	-	4.3e-33	112.8	17.5	1e-12	47.6	2.7	3.6	3	0	0	3	3	3	3	Topoisomerase	DNA	binding	C4	zinc	finger
SWIB	PF02201.18	gi|297621926|ref|YP_003710063.1|	-	1.8e-26	91.8	0.0	4.8e-26	90.4	0.0	1.8	1	0	0	1	1	1	1	SWIB/MDM2	domain
Toprim	PF01751.22	gi|297621926|ref|YP_003710063.1|	-	2.6e-26	91.8	0.0	6.9e-26	90.5	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
Zn_Tnp_IS1	PF03811.13	gi|297621926|ref|YP_003710063.1|	-	0.037	13.8	1.0	0.67	9.7	0.1	2.6	2	0	0	2	2	2	0	InsA	N-terminal	domain
Zn-ribbon_8	PF09723.10	gi|297621926|ref|YP_003710063.1|	-	0.083	13.0	2.3	0.44	10.7	0.0	2.7	3	0	0	3	3	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|297621926|ref|YP_003710063.1|	-	0.1	13.3	0.7	10	6.9	0.1	2.6	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Toprim_4	PF13662.6	gi|297621926|ref|YP_003710063.1|	-	0.15	12.6	0.0	0.51	10.8	0.0	1.9	1	0	0	1	1	1	0	Toprim	domain
Rad50_zn_hook	PF04423.14	gi|297621926|ref|YP_003710063.1|	-	0.16	11.8	0.5	2.6	8.0	0.1	2.7	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
YdjO	PF14169.6	gi|297621926|ref|YP_003710063.1|	-	0.21	11.4	0.6	0.78	9.5	0.1	2.2	2	0	0	2	2	2	0	Cold-inducible	protein	YdjO
PHINT_rpt	PF14882.6	gi|297621926|ref|YP_003710063.1|	-	1.6	9.0	4.1	1.8	8.9	0.4	2.7	3	0	0	3	3	3	0	Phage-integrase	repeat	unit
zf-TFIIB	PF13453.6	gi|297621926|ref|YP_003710063.1|	-	2.8	7.3	4.5	22	4.5	1.1	2.7	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
DNA_ligase_ZBD	PF03119.16	gi|297621926|ref|YP_003710063.1|	-	3.2	7.8	4.9	1.6	8.8	0.2	2.6	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn_Tnp_IS1595	PF12760.7	gi|297621926|ref|YP_003710063.1|	-	4.7	7.3	7.8	2.8	8.0	1.1	2.6	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
CaMKII_AD	PF08332.10	gi|297621927|ref|YP_003710064.1|	-	6.3e-08	32.8	0.2	8.9e-08	32.3	0.2	1.1	1	0	0	1	1	1	1	Calcium/calmodulin	dependent	protein	kinase	II	association	domain
SnoaL_2	PF12680.7	gi|297621927|ref|YP_003710064.1|	-	1.6e-07	31.9	0.0	2e-07	31.6	0.0	1.2	1	0	0	1	1	1	1	SnoaL-like	domain
SnoaL_3	PF13474.6	gi|297621927|ref|YP_003710064.1|	-	3e-06	27.5	0.0	5.6e-06	26.6	0.0	1.3	1	1	0	1	1	1	1	SnoaL-like	domain
DUF4440	PF14534.6	gi|297621927|ref|YP_003710064.1|	-	0.00021	21.7	0.0	0.00026	21.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4440)
SnoaL	PF07366.12	gi|297621927|ref|YP_003710064.1|	-	0.0024	17.6	0.0	0.0038	17.0	0.0	1.3	1	0	0	1	1	1	1	SnoaL-like	polyketide	cyclase
SnoaL_4	PF13577.6	gi|297621927|ref|YP_003710064.1|	-	0.021	14.9	0.0	0.044	13.9	0.0	1.5	1	1	0	1	1	1	0	SnoaL-like	domain
NTF2	PF02136.20	gi|297621927|ref|YP_003710064.1|	-	0.024	15.2	0.0	0.032	14.8	0.0	1.2	1	0	0	1	1	1	0	Nuclear	transport	factor	2	(NTF2)	domain
OEP	PF02321.18	gi|297621928|ref|YP_003710065.1|	-	1.3e-36	126.2	0.1	3.3e-18	66.2	0.0	2.1	2	0	0	2	2	2	2	Outer	membrane	efflux	protein
RRP36	PF06102.12	gi|297621928|ref|YP_003710065.1|	-	0.039	13.9	1.7	0.059	13.3	0.5	1.8	2	0	0	2	2	2	0	rRNA	biogenesis	protein	RRP36
ABC2_membrane_3	PF12698.7	gi|297621929|ref|YP_003710066.1|	-	2.4e-37	128.8	12.1	2.8e-37	128.6	12.1	1.0	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.24	gi|297621929|ref|YP_003710066.1|	-	3.9e-26	91.8	18.2	3.5e-25	88.7	14.1	2.2	2	0	0	2	2	2	2	ABC-2	type	transporter
ABC2_membrane_2	PF12679.7	gi|297621929|ref|YP_003710066.1|	-	1.1e-21	77.4	8.4	1.4e-21	77.0	8.4	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|297621929|ref|YP_003710066.1|	-	0.0004	20.4	6.9	0.0004	20.4	6.9	2.1	2	1	0	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.7	gi|297621930|ref|YP_003710067.1|	-	6.8e-43	147.1	20.8	8.1e-43	146.9	20.8	1.0	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|297621930|ref|YP_003710067.1|	-	8.2e-28	97.5	12.2	1.3e-27	96.8	12.2	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.24	gi|297621930|ref|YP_003710067.1|	-	6.1e-26	91.1	29.3	2.5e-22	79.3	20.8	2.8	2	1	0	2	2	2	2	ABC-2	type	transporter
ABC2_membrane_4	PF12730.7	gi|297621930|ref|YP_003710067.1|	-	1.6e-06	28.2	11.9	1.6e-06	28.2	11.9	2.4	2	1	1	3	3	3	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.6	gi|297621930|ref|YP_003710067.1|	-	1.2	8.7	29.1	2.2	7.8	24.7	2.8	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
E1-E2_ATPase	PF00122.20	gi|297621930|ref|YP_003710067.1|	-	6.7	6.2	5.9	0.9	9.0	1.5	1.9	2	0	0	2	2	2	0	E1-E2	ATPase
ABC_tran	PF00005.27	gi|297621931|ref|YP_003710068.1|	-	1.9e-54	183.9	0.0	4.8e-26	91.9	0.0	2.3	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.6	gi|297621931|ref|YP_003710068.1|	-	5e-27	95.5	2.7	5.9e-10	39.4	0.0	4.3	2	2	0	4	4	4	4	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|297621931|ref|YP_003710068.1|	-	1.7e-08	35.2	2.0	0.00074	20.1	0.1	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_29	PF13555.6	gi|297621931|ref|YP_003710068.1|	-	1.9e-05	24.3	1.0	0.15	11.9	0.1	3.1	3	0	0	3	3	3	2	P-loop	containing	region	of	AAA	domain
KdpD	PF02702.17	gi|297621931|ref|YP_003710068.1|	-	3.1e-05	23.5	0.0	0.072	12.6	0.0	2.3	2	0	0	2	2	2	2	Osmosensitive	K+	channel	His	kinase	sensor	domain
Rad17	PF03215.15	gi|297621931|ref|YP_003710068.1|	-	9e-05	22.5	0.0	0.13	12.1	0.0	2.2	2	0	0	2	2	2	2	Rad17	P-loop	domain
AAA_15	PF13175.6	gi|297621931|ref|YP_003710068.1|	-	0.00012	21.9	0.5	1.9	8.1	0.0	3.8	4	0	0	4	4	4	1	AAA	ATPase	domain
SMC_N	PF02463.19	gi|297621931|ref|YP_003710068.1|	-	0.00013	21.5	1.4	2.4	7.5	0.0	3.4	3	0	0	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
AAA_30	PF13604.6	gi|297621931|ref|YP_003710068.1|	-	0.00014	21.6	0.0	0.074	12.8	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|297621931|ref|YP_003710068.1|	-	0.00015	21.7	0.3	0.15	11.9	0.0	2.6	3	0	0	3	3	2	1	RsgA	GTPase
AAA	PF00004.29	gi|297621931|ref|YP_003710068.1|	-	0.00023	21.6	0.3	0.74	10.2	0.0	3.6	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Cdc6_C	PF09079.11	gi|297621931|ref|YP_003710068.1|	-	0.00028	20.8	0.0	0.6	10.1	0.0	2.5	2	0	0	2	2	2	2	CDC6,	C	terminal	winged	helix	domain
AAA_14	PF13173.6	gi|297621931|ref|YP_003710068.1|	-	0.00066	19.7	0.1	0.06	13.4	0.0	3.4	3	0	0	3	3	3	1	AAA	domain
SbcCD_C	PF13558.6	gi|297621931|ref|YP_003710068.1|	-	0.00085	19.5	0.0	2.1	8.6	0.0	3.2	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_27	PF13514.6	gi|297621931|ref|YP_003710068.1|	-	0.00095	18.8	0.0	0.11	12.1	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|297621931|ref|YP_003710068.1|	-	0.0011	19.2	0.5	0.74	10.1	0.1	3.3	3	1	0	3	3	3	1	AAA	domain
AAA_5	PF07728.14	gi|297621931|ref|YP_003710068.1|	-	0.0021	18.0	0.4	6.3	6.8	0.0	3.5	3	0	0	3	3	3	0	AAA	domain	(dynein-related	subfamily)
MMR_HSR1	PF01926.23	gi|297621931|ref|YP_003710068.1|	-	0.0022	18.1	0.0	4.7	7.3	0.0	3.2	4	0	0	4	4	3	1	50S	ribosome-binding	GTPase
AAA_18	PF13238.6	gi|297621931|ref|YP_003710068.1|	-	0.0036	17.8	0.1	0.39	11.2	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.21	gi|297621931|ref|YP_003710068.1|	-	0.0058	16.0	0.3	0.43	9.9	0.0	2.4	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.22	gi|297621931|ref|YP_003710068.1|	-	0.0071	16.7	0.0	4.4	7.7	0.0	2.6	2	0	0	2	2	2	1	RNA	helicase
AAA_33	PF13671.6	gi|297621931|ref|YP_003710068.1|	-	0.012	15.8	0.1	3.9	7.6	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
RecA	PF00154.21	gi|297621931|ref|YP_003710068.1|	-	0.013	15.0	0.0	0.045	13.2	0.0	1.8	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
SRP54	PF00448.22	gi|297621931|ref|YP_003710068.1|	-	0.014	15.1	0.3	1.6	8.4	0.0	2.3	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
IstB_IS21	PF01695.17	gi|297621931|ref|YP_003710068.1|	-	0.017	14.9	0.1	4.8	6.9	0.0	3.1	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
AAA_24	PF13479.6	gi|297621931|ref|YP_003710068.1|	-	0.031	14.0	1.4	3	7.5	0.0	2.7	3	0	0	3	3	2	0	AAA	domain
AAA_28	PF13521.6	gi|297621931|ref|YP_003710068.1|	-	0.031	14.5	0.3	1.1	9.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|297621931|ref|YP_003710068.1|	-	0.032	14.6	0.0	2.8	8.3	0.0	2.3	2	0	0	2	2	2	0	AAA	ATPase	domain
cobW	PF02492.19	gi|297621931|ref|YP_003710068.1|	-	0.035	13.7	0.2	0.44	10.1	0.0	2.3	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Thymidylate_kin	PF02223.17	gi|297621931|ref|YP_003710068.1|	-	0.035	13.8	0.2	2.5	7.7	0.0	2.6	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_25	PF13481.6	gi|297621931|ref|YP_003710068.1|	-	0.036	13.6	0.1	0.47	10.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.12	gi|297621931|ref|YP_003710068.1|	-	0.037	13.3	0.0	1.2	8.3	0.0	2.3	2	0	0	2	2	2	0	Zeta	toxin
AAA_7	PF12775.7	gi|297621931|ref|YP_003710068.1|	-	0.052	13.1	0.0	4.7	6.7	0.0	2.3	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
TsaE	PF02367.17	gi|297621931|ref|YP_003710068.1|	-	0.078	13.0	0.3	3	7.9	0.1	2.3	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
CLP1_P	PF16575.5	gi|297621931|ref|YP_003710068.1|	-	0.11	12.3	0.0	3.5	7.4	0.0	2.4	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
CbiA	PF01656.23	gi|297621931|ref|YP_003710068.1|	-	0.16	12.1	0.0	2.4	8.2	0.0	2.3	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
NACHT	PF05729.12	gi|297621931|ref|YP_003710068.1|	-	0.69	9.8	2.1	2.5	8.0	0.1	2.5	3	0	0	3	3	2	0	NACHT	domain
HlyD_3	PF13437.6	gi|297621932|ref|YP_003710069.1|	-	4.1e-15	56.4	0.0	6.8e-12	46.0	0.0	2.4	2	0	0	2	2	2	2	HlyD	family	secretion	protein
HlyD_D23	PF16576.5	gi|297621932|ref|YP_003710069.1|	-	2.2e-14	53.2	0.0	4e-14	52.3	0.0	1.4	1	1	0	1	1	1	1	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
Biotin_lipoyl_2	PF13533.6	gi|297621932|ref|YP_003710069.1|	-	6.3e-08	32.3	0.0	1.2e-07	31.4	0.0	1.5	1	0	0	1	1	1	1	Biotin-lipoyl	like
Biotin_lipoyl	PF00364.22	gi|297621932|ref|YP_003710069.1|	-	0.013	15.3	0.0	0.097	12.5	0.0	2.2	2	0	0	2	2	2	0	Biotin-requiring	enzyme
Na_H_antiport_3	PF07399.11	gi|297621934|ref|YP_003710071.1|	-	8.1e-177	588.3	15.7	9.5e-177	588.1	15.7	1.0	1	0	0	1	1	1	1	Putative	Na+/H+	antiporter
Na_Ca_ex	PF01699.24	gi|297621935|ref|YP_003710072.1|	-	1.7e-51	174.1	42.6	2.2e-27	95.9	16.3	2.0	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
CitMHS	PF03600.16	gi|297621936|ref|YP_003710073.1|	-	2.9e-38	131.8	44.4	2.2e-25	89.5	11.4	2.6	2	1	1	3	3	3	2	Citrate	transporter
TrkA_C	PF02080.21	gi|297621936|ref|YP_003710073.1|	-	9.9e-20	70.2	0.1	5e-09	35.9	0.0	2.4	2	0	0	2	2	2	2	TrkA-C	domain
Na_sulph_symp	PF00939.19	gi|297621936|ref|YP_003710073.1|	-	2.9e-13	49.7	32.2	7e-08	31.9	20.1	2.4	2	0	0	2	2	2	2	Sodium:sulfate	symporter	transmembrane	region
Na_Ca_ex	PF01699.24	gi|297621937|ref|YP_003710074.1|	-	3.1e-12	46.7	1.9	3.4e-12	46.6	1.9	1.0	1	0	0	1	1	1	1	Sodium/calcium	exchanger	protein
DUF21	PF01595.20	gi|297621937|ref|YP_003710074.1|	-	0.026	14.2	0.3	0.027	14.2	0.3	1.0	1	0	0	1	1	1	0	Cyclin	M	transmembrane	N-terminal	domain
SIS	PF01380.22	gi|297621939|ref|YP_003710076.1|	-	6.2e-21	74.6	0.0	9.5e-21	74.0	0.0	1.3	1	0	0	1	1	1	1	SIS	domain
CBS	PF00571.28	gi|297621939|ref|YP_003710076.1|	-	2.1e-13	50.5	2.9	2e-06	28.1	0.0	2.9	3	0	0	3	3	3	2	CBS	domain
SIS_2	PF13580.6	gi|297621939|ref|YP_003710076.1|	-	7.3e-06	26.0	0.1	0.0019	18.3	0.0	2.5	1	1	1	2	2	2	2	SIS	domain
DEAD	PF00270.29	gi|297621939|ref|YP_003710076.1|	-	0.011	15.5	0.1	0.12	12.1	0.0	2.2	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
Iso_dh	PF00180.20	gi|297621940|ref|YP_003710077.1|	-	4.7e-95	318.7	0.0	5.8e-95	318.4	0.0	1.1	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
TT1725	PF18324.1	gi|297621940|ref|YP_003710077.1|	-	2.1e-40	137.2	0.0	1e-39	135.0	0.0	2.1	2	0	0	2	2	2	1	Hypothetical	protein	TT1725
Ribosomal_L29	PF00831.23	gi|297621940|ref|YP_003710077.1|	-	1.1	9.2	4.1	7.1	6.7	0.1	2.9	3	0	0	3	3	3	0	Ribosomal	L29	protein
SDF	PF00375.18	gi|297621941|ref|YP_003710078.1|	-	4.3e-130	434.2	41.8	4.9e-130	434.1	41.8	1.0	1	0	0	1	1	1	1	Sodium:dicarboxylate	symporter	family
LpxK	PF02606.14	gi|297621942|ref|YP_003710079.1|	-	1.6e-86	290.4	0.0	1.9e-86	290.1	0.0	1.0	1	0	0	1	1	1	1	Tetraacyldisaccharide-1-P	4'-kinase
Oxidored_nitro	PF00148.19	gi|297621942|ref|YP_003710079.1|	-	0.0055	15.5	0.1	0.037	12.8	0.1	2.0	2	0	0	2	2	2	1	Nitrogenase	component	1	type	Oxidoreductase
SIS_2	PF13580.6	gi|297621943|ref|YP_003710080.1|	-	1.7e-21	76.7	0.0	3e-21	75.9	0.0	1.4	1	0	0	1	1	1	1	SIS	domain
SIS	PF01380.22	gi|297621943|ref|YP_003710080.1|	-	0.016	15.0	0.0	0.032	14.1	0.0	1.6	1	0	0	1	1	1	0	SIS	domain
G-alpha	PF00503.20	gi|297621944|ref|YP_003710081.1|	-	0.042	13.0	3.5	0.36	9.9	3.4	2.0	1	1	0	1	1	1	0	G-protein	alpha	subunit
TFX_C	PF14601.6	gi|297621945|ref|YP_003710082.1|	-	0.094	12.7	0.1	0.25	11.3	0.1	1.7	1	0	0	1	1	1	0	DNA_binding	protein,	TFX,	C-term
MTHFR	PF02219.17	gi|297621946|ref|YP_003710083.1|	-	0.00021	20.7	0.0	0.047	13.0	0.0	2.1	2	0	0	2	2	2	2	Methylenetetrahydrofolate	reductase
Meth_synt_1	PF08267.12	gi|297621947|ref|YP_003710084.1|	-	5.3e-09	36.0	0.1	2.9e-08	33.6	0.0	1.9	2	0	0	2	2	2	1	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.18	gi|297621947|ref|YP_003710084.1|	-	0.02	14.2	0.0	0.16	11.2	0.0	1.9	2	0	0	2	2	2	0	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_2	PF01717.18	gi|297621948|ref|YP_003710085.1|	-	4e-24	85.5	0.0	1.3e-23	83.8	0.0	1.9	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.12	gi|297621948|ref|YP_003710085.1|	-	0.032	13.7	0.0	0.048	13.2	0.0	1.2	1	0	0	1	1	1	0	Cobalamin-independent	synthase,	N-terminal	domain
ChiC	PF06483.11	gi|297621949|ref|YP_003710086.1|	-	0.097	12.6	0.0	0.13	12.2	0.0	1.1	1	0	0	1	1	1	0	Chitinase	C
DUF4096	PF13340.6	gi|297621951|ref|YP_003710088.1|	-	2.1e-16	59.9	0.7	2.1e-16	59.9	0.7	1.8	2	1	0	2	2	2	1	Putative	transposase	of	IS4/5	family	(DUF4096)
DDE_Tnp_1	PF01609.21	gi|297621952|ref|YP_003710089.1|	-	4.9e-15	55.8	0.0	5.5e-15	55.6	0.0	1.0	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.6	gi|297621952|ref|YP_003710089.1|	-	3e-10	40.3	0.1	4.3e-10	39.8	0.1	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.6	gi|297621952|ref|YP_003710089.1|	-	0.0021	18.1	0.0	0.0057	16.7	0.0	1.6	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.6	gi|297621952|ref|YP_003710089.1|	-	0.025	14.3	0.0	0.03	14.0	0.0	1.1	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
UvdE	PF03851.14	gi|297621952|ref|YP_003710089.1|	-	0.18	11.1	0.0	0.23	10.6	0.0	1.3	1	0	0	1	1	1	0	UV-endonuclease	UvdE
Ank_2	PF12796.7	gi|297621953|ref|YP_003710090.1|	-	5.6e-12	46.1	0.8	0.0011	19.5	0.0	5.2	2	2	3	5	5	5	4	Ankyrin	repeats	(3	copies)
Ank_4	PF13637.6	gi|297621953|ref|YP_003710090.1|	-	5.9e-08	33.1	0.0	5.5	7.7	0.0	6.5	6	1	1	7	7	7	3	Ankyrin	repeats	(many	copies)
Ank	PF00023.30	gi|297621953|ref|YP_003710090.1|	-	2e-06	28.0	0.0	2	9.0	0.0	6.5	6	2	0	6	6	6	2	Ankyrin	repeat
Ank_5	PF13857.6	gi|297621953|ref|YP_003710090.1|	-	0.0025	18.1	0.0	30	5.1	0.0	4.8	5	0	0	5	5	5	2	Ankyrin	repeats	(many	copies)
PseudoU_synth_2	PF00849.22	gi|297621954|ref|YP_003710091.1|	-	3.7e-28	98.6	0.1	4.4e-28	98.4	0.1	1.1	1	0	0	1	1	1	1	RNA	pseudouridylate	synthase
SpoU_methylase	PF00588.19	gi|297621955|ref|YP_003710092.1|	-	1.5e-36	125.7	0.0	2e-36	125.3	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
SpoU_sub_bind	PF08032.12	gi|297621955|ref|YP_003710092.1|	-	4e-05	23.8	0.0	0.00034	20.8	0.0	2.2	2	0	0	2	2	2	1	RNA	2'-O	ribose	methyltransferase	substrate	binding
TSNR_N	PF04705.12	gi|297621955|ref|YP_003710092.1|	-	0.0011	19.0	0.0	0.002	18.2	0.0	1.4	1	0	0	1	1	1	1	Thiostrepton-resistance	methylase,	N	terminus
F-box-like_2	PF13013.6	gi|297621955|ref|YP_003710092.1|	-	0.1	12.6	0.0	0.36	10.8	0.0	1.8	2	0	0	2	2	2	0	F-box-like	domain
Methyltrans_SAM	PF10672.9	gi|297621956|ref|YP_003710093.1|	-	1.9e-17	63.4	0.0	2.5e-17	63.0	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine-dependent	methyltransferase
Cons_hypoth95	PF03602.15	gi|297621956|ref|YP_003710093.1|	-	6.4e-07	29.2	0.0	9.1e-07	28.7	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_15	PF09445.10	gi|297621956|ref|YP_003710093.1|	-	0.0012	18.5	0.0	0.0016	18.0	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Met_10	PF02475.16	gi|297621956|ref|YP_003710093.1|	-	0.0049	16.6	0.0	0.0064	16.3	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_25	PF13649.6	gi|297621956|ref|YP_003710093.1|	-	0.0061	17.2	0.0	0.015	16.0	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|297621956|ref|YP_003710093.1|	-	0.0096	15.5	0.0	0.016	14.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|297621956|ref|YP_003710093.1|	-	0.037	13.4	0.0	0.051	13.0	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_11	PF08241.12	gi|297621956|ref|YP_003710093.1|	-	0.04	14.6	0.0	0.11	13.2	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
CinA	PF02464.17	gi|297621957|ref|YP_003710094.1|	-	1.5e-46	157.8	0.0	2.5e-46	157.1	0.0	1.4	1	0	0	1	1	1	1	Competence-damaged	protein
MoCF_biosynth	PF00994.24	gi|297621957|ref|YP_003710094.1|	-	8e-29	100.2	0.0	1.2e-28	99.5	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
CinA_KH	PF18146.1	gi|297621957|ref|YP_003710094.1|	-	2.4e-05	24.4	0.0	6.8e-05	23.0	0.0	1.8	1	0	0	1	1	1	1	Damage-inducible	protein	CinA	KH	domain
HisG_C	PF08029.11	gi|297621958|ref|YP_003710095.1|	-	0.11	12.7	0.0	0.2	11.8	0.0	1.4	1	0	0	1	1	1	0	HisG,	C-terminal	domain
Peptidase_A8	PF01252.18	gi|297621959|ref|YP_003710096.1|	-	8.8e-31	107.0	8.7	1e-30	106.8	8.7	1.0	1	0	0	1	1	1	1	Signal	peptidase	(SPase)	II
zf-dskA_traR	PF01258.17	gi|297621960|ref|YP_003710097.1|	-	8.5e-10	38.4	0.0	1.2e-09	37.9	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	dksA/traR	C4-type	zinc	finger
DUF3958	PF13125.6	gi|297621960|ref|YP_003710097.1|	-	0.036	14.3	0.9	0.055	13.7	0.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3958)
PRP21_like_P	PF12230.8	gi|297621960|ref|YP_003710097.1|	-	0.042	13.7	0.3	0.051	13.5	0.3	1.1	1	0	0	1	1	1	0	Pre-mRNA	splicing	factor	PRP21	like	protein
ATP-cone	PF03477.16	gi|297621961|ref|YP_003710098.1|	-	6.8e-17	61.8	0.4	1.4e-16	60.8	0.4	1.5	1	0	0	1	1	1	1	ATP	cone	domain
Mononeg_RNA_pol	PF00946.19	gi|297621961|ref|YP_003710098.1|	-	0.0046	14.7	0.1	0.005	14.6	0.1	1.1	1	0	0	1	1	1	1	Mononegavirales	RNA	dependent	RNA	polymerase
Zn_Tnp_IS1595	PF12760.7	gi|297621961|ref|YP_003710098.1|	-	0.02	14.8	0.8	0.039	13.9	0.8	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|297621961|ref|YP_003710098.1|	-	0.17	11.4	1.0	0.99	9.0	0.1	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
Phage_CII	PF05269.11	gi|297621963|ref|YP_003710100.1|	-	1.9e-06	28.0	0.2	0.0066	16.6	0.0	3.4	3	0	0	3	3	3	2	Bacteriophage	CII	protein
Pkinase_Tyr	PF07714.17	gi|297621963|ref|YP_003710100.1|	-	0.041	13.2	0.0	0.092	12.0	0.0	1.5	1	0	0	1	1	1	0	Protein	tyrosine	kinase
Lysine_decarbox	PF03641.14	gi|297621964|ref|YP_003710101.1|	-	4.7e-24	85.0	0.0	9.3e-24	84.0	0.0	1.5	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
LDcluster4	PF18306.1	gi|297621964|ref|YP_003710101.1|	-	7.9e-09	35.3	0.0	4.7e-08	32.8	0.0	2.1	1	1	0	1	1	1	1	SLOG	cluster4	family
LydB	PF16084.5	gi|297621964|ref|YP_003710101.1|	-	0.14	12.0	0.0	0.26	11.1	0.0	1.4	1	0	0	1	1	1	0	LydA-holin	antagonist
Methyltransf_4	PF02390.17	gi|297621965|ref|YP_003710102.1|	-	0.0053	16.2	0.0	0.0071	15.8	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_31	PF13847.6	gi|297621965|ref|YP_003710102.1|	-	0.071	12.9	0.0	0.18	11.6	0.0	1.5	2	0	0	2	2	2	0	Methyltransferase	domain
Methyltransf_17	PF12692.7	gi|297621965|ref|YP_003710102.1|	-	0.16	12.0	0.0	0.24	11.4	0.0	1.2	1	0	0	1	1	1	0	S-adenosyl-L-methionine	methyltransferase
Methyltransf_25	PF13649.6	gi|297621965|ref|YP_003710102.1|	-	0.21	12.3	0.0	0.35	11.6	0.0	1.5	1	1	0	1	1	1	0	Methyltransferase	domain
CheR_N	PF03705.15	gi|297621966|ref|YP_003710103.1|	-	0.036	13.8	0.0	0.053	13.2	0.0	1.3	1	0	0	1	1	1	0	CheR	methyltransferase,	all-alpha	domain
Lon_C	PF05362.13	gi|297621968|ref|YP_003710105.1|	-	6.9e-50	169.4	1.6	1.1e-49	168.7	1.6	1.4	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA	PF00004.29	gi|297621968|ref|YP_003710105.1|	-	1.3e-13	51.5	0.0	7e-13	49.2	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TIP49	PF06068.13	gi|297621968|ref|YP_003710105.1|	-	4.1e-05	22.9	0.0	9e-05	21.8	0.0	1.5	1	0	0	1	1	1	1	TIP49	P-loop	domain
AAA_5	PF07728.14	gi|297621968|ref|YP_003710105.1|	-	0.00014	21.9	0.0	0.0011	18.9	0.0	2.4	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
IQ	PF00612.27	gi|297621968|ref|YP_003710105.1|	-	0.00046	19.7	0.1	0.0016	18.1	0.1	1.9	1	0	0	1	1	1	1	IQ	calmodulin-binding	motif
ChlI	PF13541.6	gi|297621968|ref|YP_003710105.1|	-	0.00063	19.6	0.0	0.0026	17.6	0.0	2.1	2	0	0	2	2	2	1	Subunit	ChlI	of	Mg-chelatase
TsaE	PF02367.17	gi|297621968|ref|YP_003710105.1|	-	0.011	15.7	0.0	0.027	14.5	0.0	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_22	PF13401.6	gi|297621968|ref|YP_003710105.1|	-	0.013	15.8	1.0	0.17	12.2	0.0	3.1	3	1	0	3	3	3	0	AAA	domain
AAA_16	PF13191.6	gi|297621968|ref|YP_003710105.1|	-	0.019	15.4	0.7	0.46	10.8	0.0	3.1	3	1	1	4	4	4	0	AAA	ATPase	domain
AAA_24	PF13479.6	gi|297621968|ref|YP_003710105.1|	-	0.052	13.3	0.1	2.6	7.7	0.0	3.2	2	1	1	3	3	3	0	AAA	domain
Torsin	PF06309.11	gi|297621968|ref|YP_003710105.1|	-	0.068	13.3	0.0	0.21	11.7	0.0	1.8	1	0	0	1	1	1	0	Torsin
Apolipoprotein	PF01442.18	gi|297621968|ref|YP_003710105.1|	-	0.072	13.0	0.8	0.12	12.2	0.1	1.7	2	0	0	2	2	2	0	Apolipoprotein	A1/A4/E	domain
PH_11	PF15413.6	gi|297621968|ref|YP_003710105.1|	-	0.16	12.4	0.2	0.39	11.2	0.2	1.6	1	0	0	1	1	1	0	Pleckstrin	homology	domain
Nmad5	PF18757.1	gi|297621968|ref|YP_003710105.1|	-	0.44	10.7	2.3	3.7	7.7	0.2	2.7	2	0	0	2	2	2	0	Nucleotide	modification	associated	domain	5
ATPase	PF06745.13	gi|297621968|ref|YP_003710105.1|	-	1.2	8.4	6.0	0.45	9.8	0.1	3.1	3	1	0	4	4	4	0	KaiC
Inositol_P	PF00459.25	gi|297621969|ref|YP_003710106.1|	-	1.6e-71	241.1	0.0	1.7e-71	240.9	0.0	1.0	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.20	gi|297621969|ref|YP_003710106.1|	-	0.22	11.0	0.0	0.35	10.3	0.0	1.2	1	0	0	1	1	1	0	Fructose-1-6-bisphosphatase,	N-terminal	domain
BPL_N	PF09825.9	gi|297621970|ref|YP_003710107.1|	-	8.1e-79	265.4	0.3	5e-78	262.8	0.0	1.8	2	0	0	2	2	2	1	Biotin-protein	ligase,	N	terminal
GATase_3	PF07685.14	gi|297621970|ref|YP_003710107.1|	-	7.8e-06	25.6	0.0	1.5e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|297621970|ref|YP_003710107.1|	-	0.0024	17.7	0.0	0.0043	16.8	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Glyco_hydro_42M	PF08532.10	gi|297621970|ref|YP_003710107.1|	-	0.011	15.2	0.2	0.55	9.7	0.1	2.3	2	0	0	2	2	2	0	Beta-galactosidase	trimerisation	domain
BioY	PF02632.14	gi|297621971|ref|YP_003710108.1|	-	6.8e-31	107.1	17.3	8.3e-31	106.8	17.3	1.0	1	0	0	1	1	1	1	BioY	family
DUF2070	PF09843.9	gi|297621971|ref|YP_003710108.1|	-	6.4	4.9	5.9	8.7	4.5	5.9	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
GT87	PF09594.10	gi|297621972|ref|YP_003710109.1|	-	0.0004	20.2	0.0	0.0004	20.2	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	family	87
DUF5622	PF18533.1	gi|297621973|ref|YP_003710110.1|	-	0.041	14.0	1.2	0.075	13.2	1.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5622)
Rhodanese	PF00581.20	gi|297621974|ref|YP_003710111.1|	-	3.9e-23	82.0	0.0	1.5e-11	44.8	0.0	2.7	2	0	0	2	2	2	2	Rhodanese-like	domain
Lactamase_B	PF00753.27	gi|297621974|ref|YP_003710111.1|	-	5.1e-14	52.7	0.0	9.8e-14	51.8	0.0	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_5	PF14597.6	gi|297621974|ref|YP_003710111.1|	-	0.009	15.5	0.0	0.02	14.4	0.0	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Ribosomal_L12_N	PF16320.5	gi|297621974|ref|YP_003710111.1|	-	0.15	11.7	0.4	8.1	6.2	0.0	2.3	2	0	0	2	2	2	0	Ribosomal	protein	L7/L12	dimerisation	domain
FUSC	PF04632.12	gi|297621975|ref|YP_003710112.1|	-	8.1e-17	61.0	0.3	1.1e-16	60.5	0.3	1.2	1	0	0	1	1	1	1	Fusaric	acid	resistance	protein	family
FUSC_2	PF13515.6	gi|297621975|ref|YP_003710112.1|	-	3.3e-14	53.1	14.3	4.8e-14	52.6	14.3	1.2	1	0	0	1	1	1	1	Fusaric	acid	resistance	protein-like
ArAE_1	PF06081.11	gi|297621975|ref|YP_003710112.1|	-	2.4e-10	40.7	8.0	6.8e-10	39.2	8.1	1.7	1	1	1	2	2	2	1	Aromatic	acid	exporter	family	member	1
TauE	PF01925.19	gi|297621975|ref|YP_003710112.1|	-	0.069	12.8	11.8	0.11	12.1	11.8	1.3	1	0	0	1	1	1	0	Sulfite	exporter	TauE/SafE
MLTR_LBD	PF17765.1	gi|297621975|ref|YP_003710112.1|	-	0.091	12.9	0.3	0.19	11.8	0.1	1.7	2	0	0	2	2	2	0	MmyB-like	transcription	regulator	ligand	binding	domain
Ribosomal_L29	PF00831.23	gi|297621975|ref|YP_003710112.1|	-	0.096	12.7	3.8	0.11	12.4	2.0	2.2	1	1	1	2	2	2	0	Ribosomal	L29	protein
MRNIP	PF15749.5	gi|297621975|ref|YP_003710112.1|	-	0.11	13.2	0.1	0.24	12.1	0.1	1.5	1	0	0	1	1	1	0	MRN-interacting	protein
COG5	PF10392.9	gi|297621975|ref|YP_003710112.1|	-	0.19	11.9	7.1	4.1	7.6	1.8	2.6	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
Dna2	PF08696.11	gi|297621975|ref|YP_003710112.1|	-	0.67	9.7	4.4	0.73	9.6	1.6	2.2	3	0	0	3	3	3	0	DNA	replication	factor	Dna2
DUF1192	PF06698.11	gi|297621975|ref|YP_003710112.1|	-	2.5	8.2	6.0	1.3	9.2	2.7	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
HPP	PF04982.13	gi|297621975|ref|YP_003710112.1|	-	5.1	7.3	10.4	15	5.8	3.6	2.8	1	1	1	3	3	3	0	HPP	family
Fzo_mitofusin	PF04799.13	gi|297621975|ref|YP_003710112.1|	-	5.1	6.6	8.1	5.3	6.6	1.9	2.4	1	1	0	2	2	2	0	fzo-like	conserved	region
Fib_alpha	PF08702.10	gi|297621975|ref|YP_003710112.1|	-	7	6.8	6.7	48	4.1	2.0	3.0	2	1	1	3	3	3	0	Fibrinogen	alpha/beta	chain	family
UVR	PF02151.19	gi|297621975|ref|YP_003710112.1|	-	9.4	6.1	7.9	1.2	9.0	0.1	3.1	3	0	0	3	3	3	0	UvrB/uvrC	motif
Coprogen_oxidas	PF01218.18	gi|297621977|ref|YP_003710114.1|	-	2e-83	279.5	0.2	2.9e-83	279.0	0.2	1.2	1	0	0	1	1	1	1	Coproporphyrinogen	III	oxidase
tRNA_edit	PF04073.15	gi|297621978|ref|YP_003710115.1|	-	8.2e-26	90.5	0.0	1.1e-25	90.1	0.0	1.2	1	0	0	1	1	1	1	Aminoacyl-tRNA	editing	domain
ZnuA	PF01297.17	gi|297621979|ref|YP_003710116.1|	-	1.9e-54	184.8	0.0	2.3e-54	184.5	0.0	1.0	1	0	0	1	1	1	1	Zinc-uptake	complex	component	A	periplasmic
TPR_6	PF13174.6	gi|297621979|ref|YP_003710116.1|	-	0.029	15.0	0.1	4.1	8.2	0.0	2.5	2	0	0	2	2	2	0	Tetratricopeptide	repeat
EzrA	PF06160.12	gi|297621979|ref|YP_003710116.1|	-	0.13	10.5	4.0	0.03	12.5	1.0	1.4	2	0	0	2	2	2	0	Septation	ring	formation	regulator,	EzrA
ABC_tran	PF00005.27	gi|297621980|ref|YP_003710117.1|	-	1.3e-29	103.4	0.0	1.9e-29	103.0	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|297621980|ref|YP_003710117.1|	-	3.8e-08	33.5	3.7	0.0034	17.3	0.1	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|297621980|ref|YP_003710117.1|	-	3.1e-05	23.5	0.2	0.069	12.6	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|297621980|ref|YP_003710117.1|	-	0.0002	21.9	0.5	0.00035	21.1	0.5	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|297621980|ref|YP_003710117.1|	-	0.00031	21.0	0.1	0.0022	18.3	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|297621980|ref|YP_003710117.1|	-	0.0037	17.7	1.8	0.098	13.1	1.8	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.6	gi|297621980|ref|YP_003710117.1|	-	0.097	12.4	0.1	0.21	11.4	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ATP-synt_ab	PF00006.25	gi|297621980|ref|YP_003710117.1|	-	0.1	12.3	0.0	0.15	11.7	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_13	PF13166.6	gi|297621980|ref|YP_003710117.1|	-	0.15	10.7	0.2	0.75	8.4	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_15	PF13175.6	gi|297621980|ref|YP_003710117.1|	-	0.16	11.7	0.3	0.24	11.1	0.1	1.4	1	1	0	2	2	2	0	AAA	ATPase	domain
NB-ARC	PF00931.22	gi|297621980|ref|YP_003710117.1|	-	0.29	10.3	0.7	0.59	9.3	0.2	1.7	2	0	0	2	2	2	0	NB-ARC	domain
ABC-3	PF00950.17	gi|297621981|ref|YP_003710118.1|	-	7.7e-70	235.3	31.2	8.7e-70	235.2	31.2	1.0	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.18	gi|297621981|ref|YP_003710118.1|	-	1.9e-06	27.1	29.4	1.9e-06	27.1	29.4	1.7	1	1	0	1	1	1	1	FecCD	transport	family
DUF202	PF02656.15	gi|297621981|ref|YP_003710118.1|	-	0.16	12.4	0.4	0.16	12.4	0.4	4.7	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF202)
DUF1240	PF06836.12	gi|297621981|ref|YP_003710118.1|	-	2.5	8.7	6.3	11	6.6	5.4	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1240)
AAA_14	PF13173.6	gi|297621982|ref|YP_003710119.1|	-	7.8e-23	81.0	0.0	2.8e-22	79.1	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.6	gi|297621982|ref|YP_003710119.1|	-	2.4e-16	60.0	0.0	4.2e-15	56.0	0.0	2.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Rad17	PF03215.15	gi|297621982|ref|YP_003710119.1|	-	0.0012	18.8	0.0	0.0027	17.7	0.0	1.7	1	0	0	1	1	1	1	Rad17	P-loop	domain
HTH_36	PF13730.6	gi|297621982|ref|YP_003710119.1|	-	0.0015	18.5	0.0	0.0037	17.2	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
AAA_22	PF13401.6	gi|297621982|ref|YP_003710119.1|	-	0.002	18.4	0.1	0.76	10.1	0.0	3.1	2	1	1	3	3	3	1	AAA	domain
ATPase_2	PF01637.18	gi|297621982|ref|YP_003710119.1|	-	0.0022	18.0	0.1	0.066	13.1	0.0	2.4	1	1	1	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_16	PF13191.6	gi|297621982|ref|YP_003710119.1|	-	0.013	15.8	0.2	0.22	11.9	0.0	2.5	2	1	1	3	3	3	0	AAA	ATPase	domain
AAA	PF00004.29	gi|297621982|ref|YP_003710119.1|	-	0.018	15.4	0.0	0.12	12.8	0.0	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|297621982|ref|YP_003710119.1|	-	0.048	12.8	0.2	0.34	10.1	0.0	2.1	1	1	1	2	2	2	0	NB-ARC	domain
AAA_24	PF13479.6	gi|297621982|ref|YP_003710119.1|	-	0.081	12.6	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SfsA	PF03749.13	gi|297621982|ref|YP_003710119.1|	-	0.092	12.6	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	Sugar	fermentation	stimulation	protein	RE	domain
T2SSE	PF00437.20	gi|297621982|ref|YP_003710119.1|	-	0.1	11.7	0.0	0.28	10.2	0.0	1.7	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
RNA_helicase	PF00910.22	gi|297621982|ref|YP_003710119.1|	-	0.1	13.0	0.0	0.3	11.5	0.0	1.8	2	0	0	2	2	2	0	RNA	helicase
SRPRB	PF09439.10	gi|297621982|ref|YP_003710119.1|	-	0.18	11.2	0.0	0.56	9.6	0.0	1.7	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
DnaB_C	PF03796.15	gi|297621983|ref|YP_003710120.1|	-	1.1e-103	346.0	0.0	1.7e-103	345.4	0.0	1.2	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
DnaB	PF00772.21	gi|297621983|ref|YP_003710120.1|	-	1.5e-25	89.2	0.1	5.8e-25	87.4	0.0	2.0	2	0	0	2	2	2	1	DnaB-like	helicase	N	terminal	domain
AAA_25	PF13481.6	gi|297621983|ref|YP_003710120.1|	-	2e-13	50.4	0.0	3e-13	49.8	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|297621983|ref|YP_003710120.1|	-	0.0075	16.7	0.1	0.082	13.3	0.0	2.5	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase	PF06745.13	gi|297621983|ref|YP_003710120.1|	-	0.11	11.8	0.0	0.3	10.4	0.0	1.7	1	1	0	1	1	1	0	KaiC
GIDA	PF01134.22	gi|297621984|ref|YP_003710121.1|	-	4.2e-164	546.3	0.1	7.1e-164	545.5	0.1	1.4	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
GIDA_assoc	PF13932.6	gi|297621984|ref|YP_003710121.1|	-	1.5e-71	240.9	0.1	2.7e-71	240.1	0.1	1.4	1	0	0	1	1	1	1	GidA	associated	domain
FAD_oxidored	PF12831.7	gi|297621984|ref|YP_003710121.1|	-	3.3e-07	30.0	1.1	5.3e-07	29.3	1.1	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|297621984|ref|YP_003710121.1|	-	2.6e-05	23.6	2.1	0.00015	21.1	1.6	2.2	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|297621984|ref|YP_003710121.1|	-	2.8e-05	23.4	1.9	0.00069	18.8	0.5	2.3	2	0	0	2	2	2	1	FAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|297621984|ref|YP_003710121.1|	-	0.0014	18.0	0.2	0.0048	16.2	0.3	1.8	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
DAO	PF01266.24	gi|297621984|ref|YP_003710121.1|	-	0.002	17.8	0.3	0.23	11.0	0.0	2.3	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.6	gi|297621984|ref|YP_003710121.1|	-	0.0044	16.3	0.3	0.95	8.6	0.0	2.7	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.12	gi|297621984|ref|YP_003710121.1|	-	0.0077	15.3	0.5	1.5	7.8	0.4	2.3	2	0	0	2	2	2	2	Lycopene	cyclase	protein
Pyr_redox	PF00070.27	gi|297621984|ref|YP_003710121.1|	-	0.019	15.5	2.2	0.081	13.5	0.2	2.5	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|297621984|ref|YP_003710121.1|	-	0.051	12.3	4.4	0.22	10.2	0.7	2.5	3	0	0	3	3	3	0	HI0933-like	protein
Adeno_E4_ORF3	PF06931.11	gi|297621984|ref|YP_003710121.1|	-	0.17	12.1	0.0	0.62	10.3	0.0	1.9	2	0	0	2	2	2	0	Mastadenovirus	E4	ORF3	protein
BPL_LplA_LipB	PF03099.19	gi|297621985|ref|YP_003710122.1|	-	0.01	15.7	0.0	0.019	14.8	0.0	1.4	1	0	0	1	1	1	0	Biotin/lipoate	A/B	protein	ligase	family
SpoU_methylase	PF00588.19	gi|297621986|ref|YP_003710123.1|	-	1.8e-39	135.1	0.0	3e-39	134.4	0.0	1.3	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
SpoU_sub_bind	PF08032.12	gi|297621986|ref|YP_003710123.1|	-	4.3e-09	36.5	0.0	1.5e-08	34.8	0.0	1.9	2	0	0	2	2	2	1	RNA	2'-O	ribose	methyltransferase	substrate	binding
BsuBI_PstI_RE	PF06616.11	gi|297621986|ref|YP_003710123.1|	-	0.066	12.5	0.1	0.11	11.8	0.1	1.3	1	0	0	1	1	1	0	BsuBI/PstI	restriction	endonuclease	domain
Cdc13_OB2	PF18691.1	gi|297621986|ref|YP_003710123.1|	-	0.074	13.1	0.1	0.15	12.1	0.1	1.6	1	1	0	1	1	1	0	Cell	division	control	protein	13,	OB2	domain
DUF1344	PF07076.11	gi|297621987|ref|YP_003710124.1|	-	0.12	12.3	0.0	0.23	11.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1344)
Aconitase_C	PF00694.19	gi|297621988|ref|YP_003710125.1|	-	0.029	14.7	0.2	0.54	10.6	0.0	2.7	3	0	0	3	3	3	0	Aconitase	C-terminal	domain
PMT_2	PF13231.6	gi|297621989|ref|YP_003710126.1|	-	3.2e-15	56.7	17.2	3.2e-15	56.7	17.2	2.7	2	0	0	2	2	2	2	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.18	gi|297621989|ref|YP_003710126.1|	-	2e-05	24.3	17.3	2e-05	24.3	17.3	2.4	2	1	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
SHR3_chaperone	PF08229.11	gi|297621989|ref|YP_003710126.1|	-	0.1	11.5	0.2	0.19	10.7	0.2	1.4	1	0	0	1	1	1	0	ER	membrane	protein	SH3
Fer2_3	PF13085.6	gi|297621990|ref|YP_003710127.1|	-	7.4e-25	87.1	1.4	7.7e-25	87.0	0.0	1.7	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_10	PF13237.6	gi|297621990|ref|YP_003710127.1|	-	1.5e-06	28.2	5.6	1.5e-06	28.2	5.6	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|297621990|ref|YP_003710127.1|	-	8.6e-06	26.1	13.0	1.6e-05	25.2	10.4	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|297621990|ref|YP_003710127.1|	-	3.8e-05	23.8	7.4	0.0033	17.6	0.6	3.0	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|297621990|ref|YP_003710127.1|	-	5.6e-05	23.6	8.9	5.6e-05	23.6	8.9	2.4	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|297621990|ref|YP_003710127.1|	-	0.0016	18.6	7.9	0.039	14.2	0.0	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|297621990|ref|YP_003710127.1|	-	0.0092	16.6	17.4	0.019	15.5	13.7	2.8	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|297621990|ref|YP_003710127.1|	-	0.01	16.8	8.5	0.01	16.8	8.5	2.2	2	1	1	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.7	gi|297621990|ref|YP_003710127.1|	-	0.27	12.3	0.7	0.27	12.3	0.7	3.0	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|297621990|ref|YP_003710127.1|	-	0.96	9.6	11.9	2.1	8.5	3.1	3.1	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|297621990|ref|YP_003710127.1|	-	1.5	8.8	17.5	0.22	11.4	4.2	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
FAD_binding_2	PF00890.24	gi|297621991|ref|YP_003710128.1|	-	3.7e-67	227.2	0.1	6.3e-67	226.5	0.0	1.4	2	0	0	2	2	2	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.20	gi|297621991|ref|YP_003710128.1|	-	1.8e-38	131.4	0.6	2.7e-38	130.8	0.6	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.14	gi|297621991|ref|YP_003710128.1|	-	3.1e-07	29.9	0.0	1.5e-06	27.7	0.0	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|297621991|ref|YP_003710128.1|	-	5.7e-06	25.7	2.2	8.3e-05	21.8	2.6	2.3	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
DAO	PF01266.24	gi|297621991|ref|YP_003710128.1|	-	8.2e-05	22.3	0.4	0.00094	18.9	0.1	2.5	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|297621991|ref|YP_003710128.1|	-	0.0005	20.2	1.3	0.0012	19.0	1.3	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|297621991|ref|YP_003710128.1|	-	0.0007	18.4	2.8	0.0025	16.6	0.7	2.4	2	1	0	2	2	2	1	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|297621991|ref|YP_003710128.1|	-	0.00084	18.7	0.6	0.0015	17.8	0.6	1.3	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|297621991|ref|YP_003710128.1|	-	0.0026	18.2	1.1	0.0038	17.7	0.2	1.9	2	1	0	2	2	1	1	Putative	NAD(P)-binding
FAD_oxidored	PF12831.7	gi|297621991|ref|YP_003710128.1|	-	0.0031	16.9	1.7	0.0059	16.0	1.7	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Adaptin_binding	PF10199.9	gi|297621991|ref|YP_003710128.1|	-	0.0038	17.8	0.1	0.0078	16.8	0.1	1.5	1	0	0	1	1	1	1	Alpha	and	gamma	adaptin	binding	protein	p34
Pyr_redox	PF00070.27	gi|297621991|ref|YP_003710128.1|	-	0.0056	17.2	1.1	0.038	14.6	0.6	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.12	gi|297621991|ref|YP_003710128.1|	-	0.018	14.1	0.4	0.04	13.0	0.4	1.5	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Thi4	PF01946.17	gi|297621991|ref|YP_003710128.1|	-	0.02	14.2	0.1	0.049	12.9	0.1	1.7	1	0	0	1	1	1	0	Thi4	family
AlaDh_PNT_C	PF01262.21	gi|297621991|ref|YP_003710128.1|	-	0.023	14.0	0.2	0.046	13.0	0.2	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox_3	PF13738.6	gi|297621991|ref|YP_003710128.1|	-	0.12	11.5	0.1	0.12	11.5	0.1	2.0	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
adh_short	PF00106.25	gi|297621991|ref|YP_003710128.1|	-	1.9	7.9	4.0	17	4.8	0.9	2.3	2	0	0	2	2	2	0	short	chain	dehydrogenase
Sdh_cyt	PF01127.22	gi|297621992|ref|YP_003710129.1|	-	3.5e-09	36.7	17.8	8e-05	22.7	4.0	3.1	3	0	0	3	3	3	3	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
DUF4405	PF14358.6	gi|297621992|ref|YP_003710129.1|	-	0.0054	17.2	0.3	0.0054	17.2	0.3	3.5	3	1	0	3	3	3	2	Domain	of	unknown	function	(DUF4405)
DUF1691	PF07950.11	gi|297621992|ref|YP_003710129.1|	-	0.082	13.6	9.1	0.26	12.0	2.1	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1691)
MnmE_helical	PF12631.7	gi|297621993|ref|YP_003710130.1|	-	2.5e-52	178.1	0.8	3.1e-52	177.8	0.8	1.1	1	0	0	1	1	1	1	MnmE	helical	domain
TrmE_N	PF10396.9	gi|297621993|ref|YP_003710130.1|	-	2.1e-39	134.4	0.1	7.2e-39	132.7	0.1	1.9	2	0	0	2	2	2	1	GTP-binding	protein	TrmE	N-terminus
MMR_HSR1	PF01926.23	gi|297621993|ref|YP_003710130.1|	-	2.7e-27	95.1	0.1	6.5e-27	93.9	0.1	1.7	2	0	0	2	2	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|297621993|ref|YP_003710130.1|	-	2.4e-12	46.7	0.0	5.3e-11	42.3	0.0	2.3	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
AIG1	PF04548.16	gi|297621993|ref|YP_003710130.1|	-	2.5e-08	33.5	0.1	2e-07	30.6	0.0	2.2	2	0	0	2	2	2	1	AIG1	family
GTP_EFTU	PF00009.27	gi|297621993|ref|YP_003710130.1|	-	2.4e-06	27.2	0.0	0.00077	19.0	0.0	3.3	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Dynamin_N	PF00350.23	gi|297621993|ref|YP_003710130.1|	-	3.1e-06	27.3	0.0	0.034	14.2	0.0	2.5	1	1	1	2	2	2	2	Dynamin	family
MMR_HSR1_Xtn	PF16897.5	gi|297621993|ref|YP_003710130.1|	-	0.0013	18.8	0.0	0.017	15.2	0.0	2.3	2	0	0	2	2	2	1	C-terminal	region	of	MMR_HSR1	domain
Gtr1_RagA	PF04670.12	gi|297621993|ref|YP_003710130.1|	-	0.0029	17.0	0.0	0.019	14.3	0.0	2.0	2	0	0	2	2	2	1	Gtr1/RagA	G	protein	conserved	region
Roc	PF08477.13	gi|297621993|ref|YP_003710130.1|	-	0.0045	17.2	0.0	0.0099	16.1	0.0	1.6	1	1	0	1	1	1	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Ras	PF00071.22	gi|297621993|ref|YP_003710130.1|	-	0.0058	16.2	0.0	0.079	12.5	0.0	2.6	2	1	0	2	2	2	1	Ras	family
RsgA_GTPase	PF03193.16	gi|297621993|ref|YP_003710130.1|	-	0.006	16.5	0.1	0.036	14.0	0.0	2.4	2	1	0	2	2	2	1	RsgA	GTPase
GCV_T	PF01571.21	gi|297621993|ref|YP_003710130.1|	-	0.0079	15.6	0.0	0.016	14.6	0.0	1.4	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
AAA_15	PF13175.6	gi|297621993|ref|YP_003710130.1|	-	0.044	13.5	0.0	0.28	10.9	0.0	1.9	1	1	1	2	2	2	0	AAA	ATPase	domain
AAA_24	PF13479.6	gi|297621993|ref|YP_003710130.1|	-	0.045	13.5	0.0	0.087	12.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|297621993|ref|YP_003710130.1|	-	0.13	12.5	0.0	0.26	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
HhH-GPD	PF00730.25	gi|297621994|ref|YP_003710131.1|	-	6.9e-24	84.4	0.0	1.1e-23	83.8	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.23	gi|297621994|ref|YP_003710131.1|	-	3.5e-08	32.9	0.1	2.3e-07	30.3	0.0	2.2	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|297621994|ref|YP_003710131.1|	-	0.091	13.4	0.0	0.6	10.8	0.0	2.1	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
GAGA	PF09237.11	gi|297621994|ref|YP_003710131.1|	-	0.15	11.9	0.6	0.35	10.7	0.6	1.6	1	0	0	1	1	1	0	GAGA	factor
RuvA_N	PF01330.21	gi|297621995|ref|YP_003710132.1|	-	7e-19	67.7	0.7	1.6e-18	66.5	0.2	1.9	2	0	0	2	2	2	1	RuvA	N	terminal	domain
HHH_5	PF14520.6	gi|297621995|ref|YP_003710132.1|	-	1.9e-18	66.8	0.9	4.5e-18	65.6	0.2	2.0	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
HHH	PF00633.23	gi|297621995|ref|YP_003710132.1|	-	4.4e-09	35.7	0.4	0.0032	17.2	0.0	2.7	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
RuvA_C	PF07499.13	gi|297621995|ref|YP_003710132.1|	-	1.5e-08	35.0	0.1	2.7e-08	34.1	0.1	1.5	1	0	0	1	1	1	1	RuvA,	C-terminal	domain
HHH_2	PF12826.7	gi|297621995|ref|YP_003710132.1|	-	1.4e-05	25.1	0.1	0.037	14.1	0.0	3.3	1	1	2	3	3	3	2	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|297621995|ref|YP_003710132.1|	-	0.00015	21.9	0.1	0.34	11.2	0.0	2.5	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.20	gi|297621995|ref|YP_003710132.1|	-	0.00018	22.0	1.4	0.21	12.2	0.1	2.8	2	1	1	3	3	3	2	5'-3'	exonuclease,	C-terminal	SAM	fold
IMS_HHH	PF11798.8	gi|297621995|ref|YP_003710132.1|	-	0.00027	21.1	0.4	0.0088	16.3	0.1	3.3	3	1	1	4	4	3	1	IMS	family	HHH	motif
HHH_8	PF14716.6	gi|297621995|ref|YP_003710132.1|	-	0.0004	20.7	0.5	0.4	11.1	0.0	3.1	4	0	0	4	4	3	1	Helix-hairpin-helix	domain
Cdd1	PF11731.8	gi|297621995|ref|YP_003710132.1|	-	0.0011	19.1	0.2	1.2	9.4	0.0	2.9	3	1	1	4	4	4	2	Pathogenicity	locus
Transposase_20	PF02371.16	gi|297621995|ref|YP_003710132.1|	-	0.0029	17.9	0.8	1.1	9.6	0.0	2.6	3	0	0	3	3	3	2	Transposase	IS116/IS110/IS902	family
DNA_pol_lambd_f	PF10391.9	gi|297621995|ref|YP_003710132.1|	-	0.0037	17.1	0.0	3.3	7.6	0.0	2.4	2	0	0	2	2	2	2	Fingers	domain	of	DNA	polymerase	lambda
NDK	PF00334.19	gi|297621995|ref|YP_003710132.1|	-	0.047	13.7	0.0	0.066	13.2	0.0	1.2	1	0	0	1	1	1	0	Nucleoside	diphosphate	kinase
LcrG	PF07216.12	gi|297621995|ref|YP_003710132.1|	-	0.056	13.4	0.0	0.12	12.3	0.0	1.5	1	0	0	1	1	1	0	LcrG	protein
RuvC	PF02075.17	gi|297621996|ref|YP_003710133.1|	-	5.2e-48	162.7	0.0	5.9e-48	162.5	0.0	1.0	1	0	0	1	1	1	1	Crossover	junction	endodeoxyribonuclease	RuvC
DUF460	PF04312.13	gi|297621996|ref|YP_003710133.1|	-	0.22	11.2	1.5	0.32	10.7	0.5	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF460)
TPR_MLP1_2	PF07926.12	gi|297621997|ref|YP_003710134.1|	-	0.014	15.4	24.7	0.014	15.4	24.7	6.3	3	2	1	5	5	5	0	TPR/MLP1/MLP2-like	protein
Spc7	PF08317.11	gi|297621997|ref|YP_003710134.1|	-	2.9	6.7	92.5	0.63	8.9	26.7	4.2	1	1	3	4	4	4	0	Spc7	kinetochore	protein
Glyco_transf_9	PF01075.17	gi|297621998|ref|YP_003710135.1|	-	7.4e-47	159.7	0.0	1e-46	159.3	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	family	9	(heptosyltransferase)
PS_pyruv_trans	PF04230.13	gi|297621998|ref|YP_003710135.1|	-	0.055	13.4	0.0	6.6	6.6	0.0	2.3	2	0	0	2	2	2	0	Polysaccharide	pyruvyl	transferase
UDPGP	PF01704.18	gi|297621999|ref|YP_003710136.1|	-	4.5e-30	104.6	0.0	6.7e-30	104.0	0.0	1.2	1	0	0	1	1	1	1	UTP--glucose-1-phosphate	uridylyltransferase
HTH_31	PF13560.6	gi|297622000|ref|YP_003710137.1|	-	0.00034	20.9	0.0	0.006	16.9	0.0	2.9	3	1	1	4	4	4	1	Helix-turn-helix	domain
HTH_3	PF01381.22	gi|297622000|ref|YP_003710137.1|	-	0.0031	17.5	0.5	0.11	12.6	0.0	3.3	4	1	0	4	4	4	1	Helix-turn-helix
DUF3196	PF11428.8	gi|297622000|ref|YP_003710137.1|	-	0.026	14.1	2.1	0.7	9.4	0.0	2.4	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3196)
EntA_Immun	PF08951.10	gi|297622000|ref|YP_003710137.1|	-	0.46	10.9	3.3	25	5.3	0.1	3.3	3	1	0	3	3	3	0	Enterocin	A	Immunity
NAD_Gly3P_dh_C	PF07479.14	gi|297622001|ref|YP_003710138.1|	-	2.1e-47	161.0	0.4	3.3e-47	160.3	0.4	1.3	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	C-terminus
NAD_Gly3P_dh_N	PF01210.23	gi|297622001|ref|YP_003710138.1|	-	4.1e-36	124.3	0.0	6.9e-36	123.6	0.0	1.4	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.18	gi|297622001|ref|YP_003710138.1|	-	2.9e-05	24.0	0.0	0.00047	20.1	0.0	2.6	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|297622001|ref|YP_003710138.1|	-	3.1e-05	24.5	0.0	8e-05	23.2	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|297622001|ref|YP_003710138.1|	-	0.001	19.3	0.0	0.0019	18.4	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ApbA	PF02558.16	gi|297622001|ref|YP_003710138.1|	-	0.04	13.6	0.0	0.065	12.9	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.14	gi|297622001|ref|YP_003710138.1|	-	0.04	13.5	0.0	0.066	12.8	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FKBP_C	PF00254.28	gi|297622002|ref|YP_003710139.1|	-	1.3e-07	31.9	0.0	2.7e-07	30.8	0.0	1.5	1	0	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
Carb_kinase	PF01256.17	gi|297622005|ref|YP_003710142.1|	-	1.2e-43	149.4	0.0	1.6e-43	148.9	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.15	gi|297622005|ref|YP_003710142.1|	-	1.4e-38	132.5	0.0	3.6e-38	131.1	0.0	1.7	2	0	0	2	2	2	1	YjeF-related	protein	N-terminus
Phos_pyr_kin	PF08543.12	gi|297622005|ref|YP_003710142.1|	-	0.025	14.0	0.0	0.046	13.1	0.0	1.4	1	0	0	1	1	1	0	Phosphomethylpyrimidine	kinase
Glycos_transf_1	PF00534.20	gi|297622006|ref|YP_003710143.1|	-	4.3e-05	23.1	0.0	8.7e-05	22.1	0.0	1.5	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|297622006|ref|YP_003710143.1|	-	0.0035	17.4	0.0	0.01	15.8	0.0	1.8	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glycos_transf_2	PF00535.26	gi|297622007|ref|YP_003710144.1|	-	3.6e-14	52.9	0.0	6.4e-14	52.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_4	PF13704.6	gi|297622007|ref|YP_003710144.1|	-	2.5e-12	47.2	0.1	8.6e-12	45.4	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|297622007|ref|YP_003710144.1|	-	1.9e-06	27.6	0.0	4.1e-06	26.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
ANAPC3	PF12895.7	gi|297622007|ref|YP_003710144.1|	-	4.1e-05	23.7	0.6	0.07	13.4	0.3	2.4	2	0	0	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.6	gi|297622007|ref|YP_003710144.1|	-	0.00023	21.7	0.3	1.6	9.7	0.0	3.4	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|297622007|ref|YP_003710144.1|	-	0.00054	19.8	0.5	0.4	10.8	0.1	3.0	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|297622007|ref|YP_003710144.1|	-	0.0013	19.0	1.2	0.55	10.7	0.2	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|297622007|ref|YP_003710144.1|	-	0.0026	17.5	3.9	0.63	10.0	0.9	2.8	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|297622007|ref|YP_003710144.1|	-	0.011	15.7	9.8	0.33	11.2	1.2	3.5	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|297622007|ref|YP_003710144.1|	-	0.05	14.2	1.4	0.55	10.9	0.2	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|297622007|ref|YP_003710144.1|	-	0.062	13.6	0.0	16	5.9	0.0	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|297622007|ref|YP_003710144.1|	-	0.21	11.9	1.3	18	5.8	0.1	2.9	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|297622007|ref|YP_003710144.1|	-	0.46	11.2	3.0	4.4	8.1	0.3	2.9	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Methyltransf_21	PF05050.12	gi|297622008|ref|YP_003710145.1|	-	1.8e-14	54.1	0.0	3.5e-14	53.2	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	FkbM	domain
Collagen	PF01391.18	gi|297622009|ref|YP_003710146.1|	-	3.6e-32	109.9	102.6	9.7e-09	34.9	22.6	4.5	1	1	2	3	3	3	3	Collagen	triple	helix	repeat	(20	copies)
RanGAP1_C	PF07834.11	gi|297622010|ref|YP_003710147.1|	-	0.0033	17.1	0.0	0.0043	16.7	0.0	1.2	1	0	0	1	1	1	1	RanGAP1	C-terminal	domain
Brr6_like_C_C	PF10104.9	gi|297622011|ref|YP_003710148.1|	-	0.043	13.6	0.1	0.073	12.8	0.1	1.3	1	0	0	1	1	1	0	Di-sulfide	bridge	nucleocytoplasmic	transport	domain
Glyco_transf_4	PF13439.6	gi|297622012|ref|YP_003710149.1|	-	1.3e-12	48.0	0.1	2.2e-11	44.0	0.1	2.1	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|297622012|ref|YP_003710149.1|	-	4.1e-10	40.3	0.0	8.2e-10	39.3	0.0	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glycos_transf_1	PF00534.20	gi|297622012|ref|YP_003710149.1|	-	0.00061	19.4	0.0	0.0011	18.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.26	gi|297622013|ref|YP_003710150.1|	-	5.2e-13	49.2	0.0	1.2e-12	48.0	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|297622013|ref|YP_003710150.1|	-	7.9e-09	35.7	0.0	4.4e-08	33.3	0.0	1.9	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|297622013|ref|YP_003710150.1|	-	7.8e-05	22.7	0.0	0.00021	21.3	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
5-nucleotidase	PF06189.12	gi|297622013|ref|YP_003710150.1|	-	0.056	12.4	0.0	0.079	11.9	0.0	1.2	1	0	0	1	1	1	0	5'-nucleotidase
Glyco_tranf_2_2	PF10111.9	gi|297622013|ref|YP_003710150.1|	-	0.13	11.8	0.0	0.36	10.3	0.0	1.6	2	0	0	2	2	2	0	Glycosyltransferase	like	family	2
Wzy_C	PF04932.15	gi|297622014|ref|YP_003710151.1|	-	0.0054	16.4	1.0	0.0054	16.4	1.0	2.4	1	1	1	2	2	2	1	O-Antigen	ligase
rve_3	PF13683.6	gi|297622016|ref|YP_003710153.1|	-	1.1e-28	98.8	0.0	2.8e-28	97.5	0.0	1.8	1	0	0	1	1	1	1	Integrase	core	domain
rve	PF00665.26	gi|297622016|ref|YP_003710153.1|	-	1.7e-24	86.3	0.0	4.2e-24	85.0	0.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297622016|ref|YP_003710153.1|	-	1.8e-12	47.2	6.8	2.8e-12	46.6	6.1	1.7	1	1	0	1	1	1	1	HTH-like	domain
DDE_Tnp_IS240	PF13610.6	gi|297622016|ref|YP_003710153.1|	-	0.0002	21.6	0.0	0.00047	20.4	0.0	1.7	1	0	0	1	1	1	1	DDE	domain
rve_2	PF13333.6	gi|297622016|ref|YP_003710153.1|	-	0.0021	18.2	0.0	0.006	16.7	0.0	1.8	2	0	0	2	2	2	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297622016|ref|YP_003710153.1|	-	0.026	15.1	2.8	0.045	14.4	0.2	2.6	1	1	1	2	2	2	0	Homeodomain-like	domain
HTH_Tnp_1	PF01527.20	gi|297622017|ref|YP_003710154.1|	-	2.3e-19	69.5	0.2	2.8e-19	69.2	0.2	1.1	1	0	0	1	1	1	1	Transposase
HTH_23	PF13384.6	gi|297622017|ref|YP_003710154.1|	-	3e-06	26.8	0.0	6.2e-06	25.8	0.0	1.6	1	1	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297622017|ref|YP_003710154.1|	-	4.3e-05	23.6	0.0	7.2e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_IS630	PF01710.16	gi|297622017|ref|YP_003710154.1|	-	0.00017	21.6	0.3	0.0002	21.4	0.3	1.1	1	0	0	1	1	1	1	Transposase
HTH_Tnp_1_2	PF13022.6	gi|297622017|ref|YP_003710154.1|	-	0.0004	20.5	0.3	0.00065	19.9	0.3	1.4	1	1	0	1	1	1	1	Helix-turn-helix	of	insertion	element	transposase
HTH_29	PF13551.6	gi|297622017|ref|YP_003710154.1|	-	0.00082	19.3	0.1	0.0016	18.4	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
DUF1153	PF06627.11	gi|297622017|ref|YP_003710154.1|	-	0.0019	18.3	0.1	0.0031	17.6	0.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1153)
HTH_17	PF12728.7	gi|297622017|ref|YP_003710154.1|	-	0.0043	17.2	0.1	0.0084	16.3	0.0	1.7	2	1	0	2	2	2	1	Helix-turn-helix	domain
CreD	PF06123.12	gi|297622017|ref|YP_003710154.1|	-	0.024	13.5	0.1	0.024	13.4	0.1	1.0	1	0	0	1	1	1	0	Inner	membrane	protein	CreD
NusG_add	PF18298.1	gi|297622017|ref|YP_003710154.1|	-	0.057	13.6	0.0	0.075	13.3	0.0	1.3	1	1	0	1	1	1	0	NusG	additional	domain
HTH_psq	PF05225.16	gi|297622017|ref|YP_003710154.1|	-	0.11	12.3	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
IAT_beta	PF11924.8	gi|297622018|ref|YP_003710155.1|	-	1.5e-06	27.9	1.9	0.017	14.5	0.1	3.1	2	1	0	2	2	2	1	Inverse	autotransporter,	beta-domain
SLATT_6	PF18169.1	gi|297622018|ref|YP_003710155.1|	-	0.0025	17.5	1.0	0.0037	16.9	1.0	1.2	1	0	0	1	1	1	1	SMODS	and	SLOG-associating	2TM	effector	domain	6
DivIVA	PF05103.13	gi|297622018|ref|YP_003710155.1|	-	0.044	13.9	5.1	0.24	11.5	6.1	1.6	2	0	0	2	2	2	0	DivIVA	protein
Collagen	PF01391.18	gi|297622019|ref|YP_003710156.1|	-	1.7e-36	123.8	152.2	5.7e-08	32.4	30.2	5.3	1	1	4	5	5	5	5	Collagen	triple	helix	repeat	(20	copies)
DUF2391	PF09622.10	gi|297622020|ref|YP_003710157.1|	-	0.031	13.6	0.1	0.031	13.6	0.1	1.0	1	0	0	1	1	1	0	Putative	integral	membrane	protein	(DUF2391)
Glyco_tran_28_C	PF04101.16	gi|297622021|ref|YP_003710158.1|	-	0.00089	19.3	0.1	0.68	9.9	0.0	3.2	2	0	0	2	2	2	2	Glycosyltransferase	family	28	C-terminal	domain
MGDG_synth	PF06925.11	gi|297622021|ref|YP_003710158.1|	-	0.00099	19.3	0.1	0.0047	17.1	0.1	2.3	1	1	0	1	1	1	1	Monogalactosyldiacylglycerol	(MGDG)	synthase
DUF4105	PF13387.6	gi|297622021|ref|YP_003710158.1|	-	0.002	17.8	0.1	0.015	14.9	0.0	2.5	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4105)
Peptidase_C97	PF05903.14	gi|297622021|ref|YP_003710158.1|	-	0.034	14.0	0.0	0.27	11.1	0.0	2.6	2	0	0	2	2	2	0	PPPDE	putative	peptidase	domain
MukF_C	PF17193.4	gi|297622021|ref|YP_003710158.1|	-	0.12	12.5	3.5	0.75	9.9	0.2	2.8	2	0	0	2	2	2	0	MukF	C-terminal	domain
Glyco_trans_4_4	PF13579.6	gi|297622021|ref|YP_003710158.1|	-	0.22	12.0	0.0	0.43	11.0	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
Spidroin_N	PF16763.5	gi|297622021|ref|YP_003710158.1|	-	0.46	10.5	5.1	21	5.1	0.1	4.6	3	1	2	5	5	5	0	Major	ampullate	spidroin	1,	spider	silk	protein	1,	N-term
Gly_acyl_tr_N	PF06021.11	gi|297622021|ref|YP_003710158.1|	-	1.2	9.2	5.9	0.58	10.2	1.4	2.6	2	0	0	2	2	2	0	Aralkyl	acyl-CoA:amino	acid	N-acyltransferase
Pkinase	PF00069.25	gi|297622022|ref|YP_003710159.1|	-	1.1e-20	74.1	0.0	3.1e-20	72.6	0.0	1.7	1	1	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|297622022|ref|YP_003710159.1|	-	3.9e-08	32.9	0.0	6.9e-08	32.1	0.0	1.3	1	0	0	1	1	1	1	Protein	tyrosine	kinase
Kdo	PF06293.14	gi|297622022|ref|YP_003710159.1|	-	0.027	13.8	0.1	0.076	12.4	0.1	1.7	1	0	0	1	1	1	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
ACR_tran	PF00873.19	gi|297622023|ref|YP_003710160.1|	-	5.8e-263	875.1	21.7	7.2e-263	874.8	21.7	1.0	1	0	0	1	1	1	1	AcrB/AcrD/AcrF	family
SecD_SecF	PF02355.16	gi|297622023|ref|YP_003710160.1|	-	0.019	14.4	31.6	0.0074	15.7	15.4	2.7	3	0	0	3	3	3	0	Protein	export	membrane	protein
Sigma70_r4_2	PF08281.12	gi|297622023|ref|YP_003710160.1|	-	0.13	12.0	0.3	8.2	6.2	0.0	2.8	2	0	0	2	2	2	0	Sigma-70,	region	4
Patched	PF02460.18	gi|297622023|ref|YP_003710160.1|	-	0.13	10.3	15.0	0.2	9.7	15.0	1.2	1	0	0	1	1	1	0	Patched	family
HMA	PF00403.26	gi|297622023|ref|YP_003710160.1|	-	0.48	10.9	2.2	9.8	6.7	0.0	3.5	4	0	0	4	4	4	0	Heavy-metal-associated	domain
HlyD_D23	PF16576.5	gi|297622024|ref|YP_003710161.1|	-	1.7e-11	43.7	0.0	3.2e-11	42.9	0.0	1.4	1	0	0	1	1	1	1	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
Biotin_lipoyl_2	PF13533.6	gi|297622024|ref|YP_003710161.1|	-	2.6e-07	30.4	0.0	1.1e-05	25.2	0.0	3.0	3	0	0	3	3	3	1	Biotin-lipoyl	like
HlyD	PF00529.20	gi|297622024|ref|YP_003710161.1|	-	1.8e-05	24.5	0.0	1.8e-05	24.5	0.0	1.4	1	1	0	1	1	1	1	HlyD	membrane-fusion	protein	of	T1SS
HlyD_3	PF13437.6	gi|297622024|ref|YP_003710161.1|	-	0.00035	21.2	0.0	0.0013	19.4	0.0	2.0	2	0	0	2	2	2	1	HlyD	family	secretion	protein
Casein	PF00363.18	gi|297622024|ref|YP_003710161.1|	-	0.028	14.8	1.3	0.088	13.2	0.0	2.2	2	0	0	2	2	2	0	Casein
OEP	PF02321.18	gi|297622024|ref|YP_003710161.1|	-	0.27	11.0	4.9	0.4	10.5	4.9	1.2	1	0	0	1	1	1	0	Outer	membrane	efflux	protein
FliJ	PF02050.16	gi|297622024|ref|YP_003710161.1|	-	1.2	9.4	7.8	0.084	13.1	2.5	1.8	2	0	0	2	2	2	0	Flagellar	FliJ	protein
OEP	PF02321.18	gi|297622025|ref|YP_003710162.1|	-	4e-51	173.5	12.3	3.1e-29	102.1	0.5	2.0	2	0	0	2	2	2	2	Outer	membrane	efflux	protein
Polysacc_synt_3	PF13440.6	gi|297622026|ref|YP_003710163.1|	-	1.1e-12	47.8	12.8	1.1e-12	47.8	12.8	1.9	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt	PF01943.17	gi|297622026|ref|YP_003710163.1|	-	2.3e-09	37.1	25.5	2.3e-09	37.1	25.5	2.4	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
Methyltransf_23	PF13489.6	gi|297622028|ref|YP_003710165.1|	-	0.026	14.4	0.0	0.034	14.0	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Glycos_transf_1	PF00534.20	gi|297622029|ref|YP_003710166.1|	-	1.6e-23	83.2	0.1	3.8e-23	81.9	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|297622029|ref|YP_003710166.1|	-	9.3e-18	64.9	0.0	1.8e-17	64.0	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|297622029|ref|YP_003710166.1|	-	6.4e-05	23.0	0.0	0.00012	22.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|297622029|ref|YP_003710166.1|	-	0.00039	20.8	0.0	0.00097	19.5	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
UDPG_MGDP_dh_N	PF03721.14	gi|297622030|ref|YP_003710167.1|	-	1.9e-42	145.0	0.0	2.9e-42	144.4	0.0	1.2	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|297622030|ref|YP_003710167.1|	-	1e-30	105.8	0.0	1.8e-30	105.0	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.15	gi|297622030|ref|YP_003710167.1|	-	8.7e-22	77.5	0.0	4.3e-20	72.1	0.0	2.3	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_binding_2	PF03446.15	gi|297622030|ref|YP_003710167.1|	-	4.9e-07	30.0	0.0	8.1e-06	26.1	0.0	2.7	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|297622030|ref|YP_003710167.1|	-	0.012	15.0	0.0	0.032	13.6	0.0	1.7	1	1	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|297622030|ref|YP_003710167.1|	-	0.015	15.0	0.0	0.032	13.9	0.0	1.6	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.18	gi|297622030|ref|YP_003710167.1|	-	0.026	14.4	0.0	0.053	13.4	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|297622030|ref|YP_003710167.1|	-	0.033	14.2	0.0	0.073	13.0	0.0	1.6	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DegT_DnrJ_EryC1	PF01041.17	gi|297622031|ref|YP_003710168.1|	-	5.3e-119	397.7	0.0	6.1e-119	397.5	0.0	1.0	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.21	gi|297622031|ref|YP_003710168.1|	-	2.8e-10	39.9	0.0	3.6e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|297622031|ref|YP_003710168.1|	-	6.6e-08	32.2	0.0	3.1e-07	30.0	0.0	1.9	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.20	gi|297622031|ref|YP_003710168.1|	-	1.2e-07	30.7	0.0	1.8e-07	30.0	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.19	gi|297622031|ref|YP_003710168.1|	-	1.9e-06	27.1	0.0	2.7e-06	26.6	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
OKR_DC_1	PF01276.20	gi|297622031|ref|YP_003710168.1|	-	0.15	10.7	0.0	0.23	10.1	0.0	1.2	1	0	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	major	domain
Hexapep	PF00132.24	gi|297622032|ref|YP_003710169.1|	-	4.7e-19	67.3	10.0	1.8e-08	33.8	0.5	3.7	2	1	2	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
GFO_IDH_MocA	PF01408.22	gi|297622032|ref|YP_003710169.1|	-	4.3e-16	59.8	0.0	8.9e-16	58.8	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Hexapep_2	PF14602.6	gi|297622032|ref|YP_003710169.1|	-	7.1e-12	44.9	10.9	1.6e-06	27.8	2.4	3.2	3	0	0	3	3	3	2	Hexapeptide	repeat	of	succinyl-transferase
NAD_Gly3P_dh_N	PF01210.23	gi|297622032|ref|YP_003710169.1|	-	0.14	12.1	0.0	1.3	8.9	0.0	2.1	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
SNF2_N	PF00176.23	gi|297622033|ref|YP_003710170.1|	-	7.8e-45	153.1	0.1	3.4e-44	151.0	0.1	1.9	1	1	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_C	PF00271.31	gi|297622033|ref|YP_003710170.1|	-	9.3e-18	64.6	0.0	2.6e-17	63.2	0.0	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
OEP	PF02321.18	gi|297622034|ref|YP_003710171.1|	-	7.3e-59	198.7	17.3	1.7e-30	106.2	7.8	2.0	2	0	0	2	2	2	2	Outer	membrane	efflux	protein
YkyA	PF10368.9	gi|297622034|ref|YP_003710171.1|	-	0.17	11.6	6.6	0.034	13.8	2.4	1.9	2	0	0	2	2	2	0	Putative	cell-wall	binding	lipoprotein
ACR_tran	PF00873.19	gi|297622035|ref|YP_003710172.1|	-	0	1096.2	17.2	0	1096.0	17.2	1.0	1	0	0	1	1	1	1	AcrB/AcrD/AcrF	family
MMPL	PF03176.15	gi|297622035|ref|YP_003710172.1|	-	1.4e-09	37.4	20.1	5.5e-09	35.4	9.0	2.3	2	0	0	2	2	2	2	MMPL	family
SecD_SecF	PF02355.16	gi|297622035|ref|YP_003710172.1|	-	0.003	17.0	14.9	0.003	17.0	14.9	2.8	3	0	0	3	3	3	2	Protein	export	membrane	protein
DUF962	PF06127.11	gi|297622035|ref|YP_003710172.1|	-	0.77	9.9	0.0	0.77	9.9	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF962)
HlyD_D23	PF16576.5	gi|297622036|ref|YP_003710173.1|	-	3.7e-18	65.6	0.1	3.9e-17	62.2	0.1	2.5	1	1	0	1	1	1	1	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
Biotin_lipoyl_2	PF13533.6	gi|297622036|ref|YP_003710173.1|	-	1.1e-12	47.6	0.0	3.3e-12	46.0	0.0	1.8	1	0	0	1	1	1	1	Biotin-lipoyl	like
HlyD_3	PF13437.6	gi|297622036|ref|YP_003710173.1|	-	2.2e-12	47.6	0.0	1.7e-06	28.6	0.0	3.4	2	2	0	2	2	2	2	HlyD	family	secretion	protein
HlyD	PF00529.20	gi|297622036|ref|YP_003710173.1|	-	8.1e-05	22.4	0.0	0.00012	21.9	0.0	1.4	1	1	0	1	1	1	1	HlyD	membrane-fusion	protein	of	T1SS
Biotin_lipoyl	PF00364.22	gi|297622036|ref|YP_003710173.1|	-	0.00051	19.8	0.1	0.0017	18.1	0.1	1.9	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Flg_bb_rod	PF00460.20	gi|297622036|ref|YP_003710173.1|	-	0.37	10.8	1.7	1.2	9.2	0.2	2.2	2	0	0	2	2	2	0	Flagella	basal	body	rod	protein
DUF1186	PF06685.11	gi|297622039|ref|YP_003710176.1|	-	1.1e-26	93.7	1.3	1.4e-26	93.3	1.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1186)
SEC-C	PF02810.15	gi|297622039|ref|YP_003710176.1|	-	2.1e-08	33.9	11.1	3.2e-08	33.3	11.1	1.3	1	0	0	1	1	1	1	SEC-C	motif
TetR_C_36	PF18598.1	gi|297622040|ref|YP_003710177.1|	-	0.15	12.0	0.0	0.28	11.1	0.0	1.4	1	0	0	1	1	1	0	Tetracyclin	repressor-like,	C-terminal	domain
Conotoxin	PF02950.17	gi|297622040|ref|YP_003710177.1|	-	0.23	12.5	0.2	0.54	11.3	0.0	1.7	2	0	0	2	2	2	0	Conotoxin
RHS_repeat	PF05593.14	gi|297622042|ref|YP_003710179.1|	-	4.5e-45	151.6	55.3	2.6e-05	24.6	0.3	19.7	16	3	4	21	21	21	16	RHS	Repeat
CRC_subunit	PF08624.10	gi|297622042|ref|YP_003710179.1|	-	0.081	13.4	1.0	1.7	9.0	0.1	3.2	3	0	0	3	3	3	0	Chromatin	remodelling	complex	Rsc7/Swp82	subunit
HAD	PF12710.7	gi|297622043|ref|YP_003710180.1|	-	8.8e-37	127.3	0.0	1e-36	127.1	0.0	1.0	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|297622043|ref|YP_003710180.1|	-	4.1e-05	24.0	0.0	0.0081	16.5	0.0	2.1	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|297622043|ref|YP_003710180.1|	-	0.23	11.5	0.2	2	8.5	0.1	2.3	2	1	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
GDP_Man_Dehyd	PF16363.5	gi|297622044|ref|YP_003710181.1|	-	1.5e-52	179.0	0.0	5e-52	177.4	0.0	1.6	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|297622044|ref|YP_003710181.1|	-	4.2e-52	177.0	0.1	4.9e-52	176.8	0.1	1.0	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.17	gi|297622044|ref|YP_003710181.1|	-	4.5e-15	55.5	0.0	6.1e-15	55.1	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.19	gi|297622044|ref|YP_003710181.1|	-	2.4e-14	53.0	0.0	3.1e-14	52.6	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|297622044|ref|YP_003710181.1|	-	1e-13	51.1	0.0	9.9e-13	47.9	0.0	2.0	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|297622044|ref|YP_003710181.1|	-	2.8e-07	30.0	0.6	8.5e-06	25.1	0.1	2.1	2	0	0	2	2	2	1	Male	sterility	protein
KR	PF08659.10	gi|297622044|ref|YP_003710181.1|	-	2.8e-05	24.1	0.0	4.8e-05	23.3	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NmrA	PF05368.13	gi|297622044|ref|YP_003710181.1|	-	0.0003	20.4	0.0	0.0012	18.5	0.0	1.9	2	0	0	2	2	2	1	NmrA-like	family
adh_short	PF00106.25	gi|297622044|ref|YP_003710181.1|	-	0.00095	18.7	0.1	0.0018	17.8	0.1	1.6	1	1	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|297622044|ref|YP_003710181.1|	-	0.0066	16.0	0.0	0.015	14.8	0.0	1.6	2	0	0	2	2	2	1	Enoyl-(Acyl	carrier	protein)	reductase
TrkA_N	PF02254.18	gi|297622044|ref|YP_003710181.1|	-	0.093	13.0	0.1	0.2	11.9	0.1	1.5	1	1	0	1	1	1	0	TrkA-N	domain
Y_phosphatase	PF00102.27	gi|297622045|ref|YP_003710182.1|	-	2.1e-30	106.0	0.2	3.7e-30	105.2	0.0	1.4	2	0	0	2	2	2	1	Protein-tyrosine	phosphatase
DSPc	PF00782.20	gi|297622045|ref|YP_003710182.1|	-	4.8e-07	29.7	0.0	3.5e-06	26.9	0.0	2.3	2	1	0	2	2	2	1	Dual	specificity	phosphatase,	catalytic	domain
TTC5_OB	PF16669.5	gi|297622045|ref|YP_003710182.1|	-	0.024	14.3	0.0	0.14	11.8	0.0	2.1	1	1	0	2	2	2	0	Tetratricopeptide	repeat	protein	5	OB	fold	domain
Y_phosphatase3	PF13350.6	gi|297622045|ref|YP_003710182.1|	-	0.041	13.9	0.1	0.08	12.9	0.0	1.6	2	0	0	2	2	2	0	Tyrosine	phosphatase	family
PTPlike_phytase	PF14566.6	gi|297622045|ref|YP_003710182.1|	-	0.12	12.5	0.9	0.24	11.5	0.1	2.1	1	1	1	2	2	2	0	Inositol	hexakisphosphate
tRNA_U5-meth_tr	PF05958.11	gi|297622046|ref|YP_003710183.1|	-	7.7e-22	77.8	0.0	4.2e-20	72.0	0.0	2.2	1	1	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_31	PF13847.6	gi|297622046|ref|YP_003710183.1|	-	1.3e-10	41.3	0.0	2.5e-10	40.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|297622046|ref|YP_003710183.1|	-	1.8e-10	41.4	0.0	8.7e-10	39.2	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Met_10	PF02475.16	gi|297622046|ref|YP_003710183.1|	-	8.4e-09	35.5	0.0	3.7e-08	33.4	0.0	1.8	2	0	0	2	2	2	1	Met-10+	like-protein
TRAM	PF01938.20	gi|297622046|ref|YP_003710183.1|	-	5e-08	32.8	0.3	1.3e-07	31.5	0.3	1.7	1	0	0	1	1	1	1	TRAM	domain
MTS	PF05175.14	gi|297622046|ref|YP_003710183.1|	-	7.5e-08	32.1	0.0	1.2e-07	31.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.12	gi|297622046|ref|YP_003710183.1|	-	4e-06	27.4	0.1	2.5e-05	24.9	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
PCMT	PF01135.19	gi|297622046|ref|YP_003710183.1|	-	7.8e-06	25.8	0.0	1.5e-05	24.8	0.0	1.4	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PrmA	PF06325.13	gi|297622046|ref|YP_003710183.1|	-	1.2e-05	24.9	0.0	2e-05	24.1	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.15	gi|297622046|ref|YP_003710183.1|	-	2.9e-05	23.8	0.0	6.4e-05	22.7	0.0	1.5	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_23	PF13489.6	gi|297622046|ref|YP_003710183.1|	-	0.00013	21.8	0.0	0.00035	20.5	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|297622046|ref|YP_003710183.1|	-	0.00016	21.3	0.0	0.00036	20.1	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Ubie_methyltran	PF01209.18	gi|297622046|ref|YP_003710183.1|	-	0.0021	17.4	0.0	0.0047	16.3	0.0	1.5	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.12	gi|297622046|ref|YP_003710183.1|	-	0.0023	18.6	0.0	0.018	15.8	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
TPMT	PF05724.11	gi|297622046|ref|YP_003710183.1|	-	0.0055	16.4	0.1	0.01	15.5	0.1	1.4	1	0	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
UPF0020	PF01170.18	gi|297622046|ref|YP_003710183.1|	-	0.011	15.5	0.2	0.85	9.3	0.1	2.6	2	1	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
BON	PF04972.17	gi|297622046|ref|YP_003710183.1|	-	0.044	14.1	0.5	0.1	12.9	0.5	1.6	1	0	0	1	1	1	0	BON	domain
Orbi_NS3	PF01616.16	gi|297622046|ref|YP_003710183.1|	-	0.061	13.0	0.0	0.1	12.3	0.0	1.3	1	0	0	1	1	1	0	Orbivirus	NS3
CMAS	PF02353.20	gi|297622046|ref|YP_003710183.1|	-	0.1	11.9	0.0	0.16	11.2	0.0	1.3	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
NodS	PF05401.11	gi|297622046|ref|YP_003710183.1|	-	0.11	12.1	0.0	0.18	11.4	0.0	1.3	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
RrnaAD	PF00398.20	gi|297622046|ref|YP_003710183.1|	-	0.15	11.1	0.0	0.27	10.2	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Hom_end_hint	PF05203.16	gi|297622048|ref|YP_003710185.1|	-	0.72	9.8	3.3	0.61	10.0	1.2	2.1	2	1	0	2	2	2	0	Hom_end-associated	Hint
Aldedh	PF00171.22	gi|297622049|ref|YP_003710186.1|	-	4.2e-157	523.3	0.0	5.1e-157	523.1	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
Endonuc_BglI	PF14562.6	gi|297622049|ref|YP_003710186.1|	-	0.12	11.5	0.0	0.18	10.8	0.0	1.2	1	0	0	1	1	1	0	Restriction	endonuclease	BglI
ERG4_ERG24	PF01222.17	gi|297622050|ref|YP_003710187.1|	-	2.3e-103	346.3	16.1	2.8e-103	346.0	16.1	1.1	1	0	0	1	1	1	1	Ergosterol	biosynthesis	ERG4/ERG24	family
Legionella_OMP	PF05150.12	gi|297622051|ref|YP_003710188.1|	-	1.7e-10	40.3	0.0	2.6e-10	39.7	0.0	1.1	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
Porin_4	PF13609.6	gi|297622051|ref|YP_003710188.1|	-	0.093	12.5	0.1	0.14	11.9	0.1	1.2	1	0	0	1	1	1	0	Gram-negative	porin
Legionella_OMP	PF05150.12	gi|297622052|ref|YP_003710189.1|	-	1.7e-16	60.0	0.0	2.7e-16	59.3	0.0	1.2	1	0	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
MTHFR_C	PF12225.8	gi|297622052|ref|YP_003710189.1|	-	0.39	10.4	5.6	0.11	12.2	2.1	1.8	2	0	0	2	2	2	0	Methylene-tetrahydrofolate	reductase	C	terminal
UvrD-helicase	PF00580.21	gi|297622053|ref|YP_003710190.1|	-	9.4e-77	258.6	0.1	3.4e-76	256.8	0.0	2.0	2	1	0	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
UvrD_C	PF13361.6	gi|297622053|ref|YP_003710190.1|	-	3.6e-62	210.8	0.2	1.1e-61	209.2	0.2	1.8	1	1	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
AAA_19	PF13245.6	gi|297622053|ref|YP_003710190.1|	-	1.3e-33	116.3	0.0	2.4e-33	115.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|297622053|ref|YP_003710190.1|	-	1.3e-09	38.0	0.0	0.00021	21.1	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
UvrD_C_2	PF13538.6	gi|297622053|ref|YP_003710190.1|	-	3.4e-09	36.4	0.0	9.1e-09	35.0	0.0	1.7	1	1	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
Viral_helicase1	PF01443.18	gi|297622053|ref|YP_003710190.1|	-	8.4e-07	29.0	0.1	0.013	15.3	0.0	3.4	3	1	0	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
Exonuc_V_gamma	PF04257.14	gi|297622053|ref|YP_003710190.1|	-	0.0049	15.2	0.0	0.0075	14.5	0.0	1.2	1	0	0	1	1	1	1	Exodeoxyribonuclease	V,	gamma	subunit
AAA_12	PF13087.6	gi|297622053|ref|YP_003710190.1|	-	0.011	15.4	0.0	0.42	10.2	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
PhoH	PF02562.16	gi|297622053|ref|YP_003710190.1|	-	0.12	11.8	0.0	0.64	9.4	0.0	2.0	2	0	0	2	2	2	0	PhoH-like	protein
Aldedh	PF00171.22	gi|297622054|ref|YP_003710191.1|	-	9.8e-113	377.1	0.0	1.9e-112	376.2	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
Pro_dh	PF01619.18	gi|297622054|ref|YP_003710191.1|	-	2.4e-61	207.8	0.4	4.1e-61	207.1	0.4	1.4	1	0	0	1	1	1	1	Proline	dehydrogenase
DUF1343	PF07075.11	gi|297622055|ref|YP_003710192.1|	-	1.2e-122	409.6	0.0	1.4e-122	409.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1343)
MFAP1	PF06991.11	gi|297622055|ref|YP_003710192.1|	-	0.045	13.6	0.7	0.069	13.0	0.7	1.2	1	0	0	1	1	1	0	Microfibril-associated/Pre-mRNA	processing
Cpn10	PF00166.21	gi|297622056|ref|YP_003710193.1|	-	1.9e-30	104.8	0.1	2.1e-30	104.6	0.1	1.0	1	0	0	1	1	1	1	Chaperonin	10	Kd	subunit
Cpn60_TCP1	PF00118.24	gi|297622057|ref|YP_003710194.1|	-	5.4e-89	299.1	23.0	9.7e-89	298.2	23.0	1.4	1	1	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
MecA_N	PF05223.11	gi|297622057|ref|YP_003710194.1|	-	0.071	13.4	0.2	0.18	12.1	0.2	1.6	1	0	0	1	1	1	0	NTF2-like	N-terminal	transpeptidase	domain
Zn-ribbon_8	PF09723.10	gi|297622058|ref|YP_003710195.1|	-	2.1e-12	47.0	3.0	2.1e-12	47.0	3.0	2.1	2	0	0	2	2	2	1	Zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|297622058|ref|YP_003710195.1|	-	0.0045	16.9	3.2	0.15	12.0	0.1	2.6	2	0	0	2	2	2	2	PhnA	Zinc-Ribbon
NOB1_Zn_bind	PF08772.11	gi|297622058|ref|YP_003710195.1|	-	0.029	14.5	0.4	0.029	14.5	0.4	2.1	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF1451	PF07295.11	gi|297622058|ref|YP_003710195.1|	-	0.046	13.8	1.0	0.069	13.2	1.0	1.2	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
zf-TFIIB	PF13453.6	gi|297622058|ref|YP_003710195.1|	-	2.2	7.7	8.1	0.15	11.4	2.1	2.0	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
VP_N-CPKC	PF11475.8	gi|297622058|ref|YP_003710195.1|	-	5.8	6.9	10.6	1.1	9.2	3.9	2.8	2	1	0	2	2	2	0	Virion	protein	N	terminal	domain
DUF1778	PF08681.11	gi|297622060|ref|YP_003710197.1|	-	0.002	18.0	0.0	0.0033	17.3	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1778)
Acetyltransf_10	PF13673.7	gi|297622061|ref|YP_003710198.1|	-	8.9e-11	41.8	0.1	1.9e-10	40.7	0.1	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|297622061|ref|YP_003710198.1|	-	3.4e-10	40.2	0.1	5.3e-10	39.6	0.1	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|297622061|ref|YP_003710198.1|	-	2.9e-09	37.2	0.1	3.8e-09	36.8	0.1	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
FR47	PF08445.10	gi|297622061|ref|YP_003710198.1|	-	0.00024	21.0	0.0	0.00048	20.0	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_8	PF13523.6	gi|297622061|ref|YP_003710198.1|	-	0.003	17.2	0.0	0.004	16.8	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|297622061|ref|YP_003710198.1|	-	0.0046	17.6	0.0	0.0059	17.3	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_15	PF17013.5	gi|297622061|ref|YP_003710198.1|	-	0.0058	16.1	0.0	0.01	15.3	0.0	1.4	1	1	0	1	1	1	1	Putative	acetyl-transferase
GNAT_acetyltr_2	PF13718.6	gi|297622061|ref|YP_003710198.1|	-	0.017	14.5	0.0	0.026	13.9	0.0	1.3	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
Acetyltransf_9	PF13527.7	gi|297622061|ref|YP_003710198.1|	-	0.12	12.4	0.0	0.27	11.3	0.0	1.6	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|297622061|ref|YP_003710198.1|	-	0.16	12.1	0.0	0.28	11.3	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
TrkH	PF02386.16	gi|297622062|ref|YP_003710199.1|	-	3.7e-45	154.3	30.3	2.2e-44	151.8	23.7	2.8	2	2	1	3	3	3	3	Cation	transport	protein
TrkA_N	PF02254.18	gi|297622063|ref|YP_003710200.1|	-	1.6e-38	131.5	0.2	1.3e-18	67.3	0.0	2.5	3	0	0	3	3	2	2	TrkA-N	domain
TrkA_C	PF02080.21	gi|297622063|ref|YP_003710200.1|	-	7.6e-24	83.3	1.0	3.7e-12	45.9	0.2	2.7	2	0	0	2	2	2	2	TrkA-C	domain
Sacchrp_dh_NADP	PF03435.18	gi|297622063|ref|YP_003710200.1|	-	3.9e-08	33.6	0.1	2.8e-05	24.4	0.0	2.7	2	1	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
ApbA	PF02558.16	gi|297622063|ref|YP_003710200.1|	-	2.9e-07	30.3	0.1	0.00016	21.4	0.0	2.5	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.18	gi|297622063|ref|YP_003710200.1|	-	1.1e-06	28.6	0.0	5.3e-05	23.2	0.0	2.2	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|297622063|ref|YP_003710200.1|	-	1.4e-06	28.8	0.1	0.033	14.7	0.0	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|297622063|ref|YP_003710200.1|	-	3.1e-06	26.7	0.0	0.0012	18.2	0.0	2.1	2	0	0	2	2	2	2	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|297622063|ref|YP_003710200.1|	-	3.5e-06	27.4	0.0	0.0053	17.2	0.0	2.4	2	0	0	2	2	2	2	Putative	NAD(P)-binding
Pyr_redox_2	PF07992.14	gi|297622063|ref|YP_003710200.1|	-	3.5e-06	26.5	0.1	0.0035	16.6	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
XdhC_C	PF13478.6	gi|297622063|ref|YP_003710200.1|	-	8.4e-06	26.3	0.0	0.0017	18.8	0.0	2.6	2	0	0	2	2	2	1	XdhC	Rossmann	domain
DUF1188	PF06690.11	gi|297622063|ref|YP_003710200.1|	-	1.2e-05	25.0	0.0	0.012	15.2	0.0	2.2	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1188)
Shikimate_DH	PF01488.20	gi|297622063|ref|YP_003710200.1|	-	1.8e-05	24.9	0.0	0.033	14.2	0.0	2.5	2	0	0	2	2	2	2	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.17	gi|297622063|ref|YP_003710200.1|	-	3.2e-05	24.4	0.1	0.0013	19.3	0.0	2.9	3	1	0	3	3	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_8	PF13450.6	gi|297622063|ref|YP_003710200.1|	-	4.6e-05	23.6	0.0	0.11	12.8	0.0	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
UDPG_MGDP_dh_N	PF03721.14	gi|297622063|ref|YP_003710200.1|	-	0.00012	21.7	0.0	0.00035	20.2	0.0	1.8	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
PglD_N	PF17836.1	gi|297622063|ref|YP_003710200.1|	-	0.00016	22.2	0.0	0.00066	20.3	0.0	2.1	2	0	0	2	2	1	1	PglD	N-terminal	domain
adh_short	PF00106.25	gi|297622063|ref|YP_003710200.1|	-	0.00045	19.7	0.0	0.0014	18.1	0.0	1.8	2	0	0	2	2	2	1	short	chain	dehydrogenase
AlaDh_PNT_C	PF01262.21	gi|297622063|ref|YP_003710200.1|	-	0.0006	19.2	0.0	0.21	10.8	0.0	2.4	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.23	gi|297622063|ref|YP_003710200.1|	-	0.00082	19.4	0.0	0.054	13.5	0.0	2.4	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
HI0933_like	PF03486.14	gi|297622063|ref|YP_003710200.1|	-	0.0012	17.7	0.0	0.037	12.7	0.0	2.1	2	0	0	2	2	2	1	HI0933-like	protein
DAO	PF01266.24	gi|297622063|ref|YP_003710200.1|	-	0.0014	18.2	0.0	1.3	8.6	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
ADH_zinc_N	PF00107.26	gi|297622063|ref|YP_003710200.1|	-	0.0025	17.8	0.0	7.1	6.6	0.0	3.5	3	0	0	3	3	3	0	Zinc-binding	dehydrogenase
Epimerase	PF01370.21	gi|297622063|ref|YP_003710200.1|	-	0.0026	17.3	0.0	0.014	14.9	0.0	2.0	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
2-Hacid_dh_C	PF02826.19	gi|297622063|ref|YP_003710200.1|	-	0.008	15.6	0.0	0.065	12.6	0.0	2.1	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.12	gi|297622063|ref|YP_003710200.1|	-	0.0097	15.0	0.1	0.94	8.5	0.0	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
NAD_binding_2	PF03446.15	gi|297622063|ref|YP_003710200.1|	-	0.022	14.9	0.0	3.5	7.8	0.0	2.3	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Thi4	PF01946.17	gi|297622063|ref|YP_003710200.1|	-	0.077	12.2	0.1	12	5.0	0.0	2.2	2	0	0	2	2	2	0	Thi4	family
THF_DHG_CYH_C	PF02882.19	gi|297622063|ref|YP_003710200.1|	-	0.1	11.9	0.3	23	4.3	0.0	3.6	3	1	1	4	4	4	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
GFO_IDH_MocA	PF01408.22	gi|297622063|ref|YP_003710200.1|	-	0.12	13.2	0.0	0.52	11.1	0.0	2.0	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
YjeF_N	PF03853.15	gi|297622063|ref|YP_003710200.1|	-	0.17	11.7	0.0	4.3	7.2	0.0	2.2	2	0	0	2	2	2	0	YjeF-related	protein	N-terminus
RHS_repeat	PF05593.14	gi|297622064|ref|YP_003710201.1|	-	5.4e-52	173.7	36.3	1.2e-06	28.8	0.1	21.5	21	4	2	23	23	23	13	RHS	Repeat
NTS	PF15447.6	gi|297622064|ref|YP_003710201.1|	-	0.0099	16.4	1.8	0.83	10.2	0.1	3.5	3	0	0	3	3	3	1	N-terminal	segments	of	PfEMP1
GSHPx	PF00255.19	gi|297622064|ref|YP_003710201.1|	-	0.17	11.4	0.5	0.53	9.9	0.2	2.0	2	0	0	2	2	2	0	Glutathione	peroxidase
NUDIX	PF00293.28	gi|297622065|ref|YP_003710202.1|	-	1.6e-15	57.3	0.0	2e-15	57.0	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
Lactamase_B	PF00753.27	gi|297622066|ref|YP_003710203.1|	-	1.3e-32	113.5	0.3	1.5e-32	113.3	0.3	1.0	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|297622066|ref|YP_003710203.1|	-	4.6e-06	26.3	0.2	6.2e-06	25.9	0.2	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|297622066|ref|YP_003710203.1|	-	0.014	15.2	0.1	0.025	14.5	0.1	1.4	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
Lactamase_B_5	PF14597.6	gi|297622066|ref|YP_003710203.1|	-	0.038	13.5	0.0	0.057	12.9	0.0	1.3	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily
Lactamase_B_6	PF16661.5	gi|297622066|ref|YP_003710203.1|	-	0.092	12.2	0.4	0.16	11.4	0.1	1.5	2	0	0	2	2	2	0	Metallo-beta-lactamase	superfamily	domain
AhpC-TSA	PF00578.21	gi|297622067|ref|YP_003710204.1|	-	1.9e-39	134.4	0.0	3.7e-39	133.5	0.0	1.4	2	0	0	2	2	2	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|297622067|ref|YP_003710204.1|	-	3.7e-18	65.6	0.0	4.4e-18	65.4	0.0	1.1	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.9	gi|297622067|ref|YP_003710204.1|	-	6.4e-10	38.7	0.0	1.5e-09	37.5	0.0	1.7	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
SCO1-SenC	PF02630.14	gi|297622067|ref|YP_003710204.1|	-	0.0077	16.1	0.0	0.074	13.0	0.0	2.0	2	0	0	2	2	2	1	SCO1/SenC
Enolase_C	PF00113.22	gi|297622069|ref|YP_003710206.1|	-	1.1e-129	431.9	0.1	1.4e-129	431.6	0.1	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.16	gi|297622069|ref|YP_003710206.1|	-	3.2e-51	172.9	0.1	8e-51	171.6	0.0	1.7	2	0	0	2	2	2	1	Enolase,	N-terminal	domain
MR_MLE_C	PF13378.6	gi|297622069|ref|YP_003710206.1|	-	2.1e-05	24.2	0.0	3.4e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MAAL_C	PF07476.11	gi|297622069|ref|YP_003710206.1|	-	0.00078	18.7	0.1	0.0013	18.0	0.1	1.3	1	0	0	1	1	1	1	Methylaspartate	ammonia-lyase	C-terminus
RsgA_GTPase	PF03193.16	gi|297622070|ref|YP_003710207.1|	-	8.1e-44	149.5	0.0	1.3e-43	148.8	0.0	1.4	1	0	0	1	1	1	1	RsgA	GTPase
RsgA_N	PF16745.5	gi|297622070|ref|YP_003710207.1|	-	1.2e-07	31.3	2.7	1.5e-07	31.0	0.1	2.4	3	0	0	3	3	2	1	RsgA	N-terminal	domain
MMR_HSR1	PF01926.23	gi|297622070|ref|YP_003710207.1|	-	4.6e-07	29.9	0.0	1.3e-06	28.5	0.0	1.8	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|297622070|ref|YP_003710207.1|	-	0.0014	18.1	0.0	0.0056	16.2	0.0	2.0	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
ABC_tran	PF00005.27	gi|297622070|ref|YP_003710207.1|	-	0.0025	18.3	0.1	0.0077	16.7	0.0	1.9	2	0	0	2	2	2	1	ABC	transporter
AAA_28	PF13521.6	gi|297622070|ref|YP_003710207.1|	-	0.017	15.4	1.5	1.8	8.8	0.2	2.8	3	0	0	3	3	3	0	AAA	domain
Ras	PF00071.22	gi|297622070|ref|YP_003710207.1|	-	0.028	14.0	0.2	0.94	9.1	0.0	2.3	1	1	1	2	2	2	0	Ras	family
AAA_16	PF13191.6	gi|297622070|ref|YP_003710207.1|	-	0.035	14.5	0.0	0.098	13.0	0.0	1.7	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_29	PF13555.6	gi|297622070|ref|YP_003710207.1|	-	0.039	13.7	0.1	0.073	12.8	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
GTP_EFTU	PF00009.27	gi|297622070|ref|YP_003710207.1|	-	0.039	13.5	0.0	0.039	13.5	0.0	2.6	2	1	1	3	3	3	0	Elongation	factor	Tu	GTP	binding	domain
cobW	PF02492.19	gi|297622070|ref|YP_003710207.1|	-	0.044	13.4	0.9	6.2	6.4	0.0	2.6	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.6	gi|297622070|ref|YP_003710207.1|	-	0.045	14.0	0.3	1.6	9.0	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
TolA	PF06519.11	gi|297622070|ref|YP_003710207.1|	-	0.057	13.6	0.1	0.16	12.2	0.1	1.8	1	0	0	1	1	1	0	TolA	C-terminal
Dynamin_N	PF00350.23	gi|297622070|ref|YP_003710207.1|	-	0.057	13.5	4.5	0.11	12.5	0.4	2.9	2	1	1	3	3	3	0	Dynamin	family
MMR_HSR1_Xtn	PF16897.5	gi|297622070|ref|YP_003710207.1|	-	0.074	13.1	0.1	0.26	11.3	0.1	1.9	1	1	0	1	1	1	0	C-terminal	region	of	MMR_HSR1	domain
NMU	PF02070.15	gi|297622071|ref|YP_003710208.1|	-	0.1	12.5	2.5	0.23	11.4	2.5	1.6	1	0	0	1	1	1	0	Neuromedin	U
SpoU_methylase	PF00588.19	gi|297622073|ref|YP_003710210.1|	-	1.3e-29	103.2	0.0	2.2e-29	102.4	0.0	1.4	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
SpoU_sub_bind	PF08032.12	gi|297622073|ref|YP_003710210.1|	-	0.065	13.5	0.0	0.22	11.8	0.0	2.0	2	1	0	2	2	2	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
PolyA_pol	PF01743.20	gi|297622074|ref|YP_003710211.1|	-	5e-36	123.9	0.1	8.2e-36	123.2	0.1	1.4	1	0	0	1	1	1	1	Poly	A	polymerase	head	domain
PolyA_pol_RNAbd	PF12627.7	gi|297622074|ref|YP_003710211.1|	-	1.7e-11	43.7	0.0	3.8e-11	42.6	0.0	1.6	1	0	0	1	1	1	1	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
tRNA_NucTran2_2	PF13735.6	gi|297622074|ref|YP_003710211.1|	-	2.8e-07	30.6	0.0	5.9e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase	domain	2	putative
Vps53_N	PF04100.12	gi|297622074|ref|YP_003710211.1|	-	0.17	10.9	0.0	0.24	10.3	0.0	1.2	1	0	0	1	1	1	0	Vps53-like,	N-terminal
DNA_mis_repair	PF01119.19	gi|297622075|ref|YP_003710212.1|	-	6e-35	119.5	0.0	2.2e-34	117.7	0.0	1.9	2	0	0	2	2	2	1	DNA	mismatch	repair	protein,	C-terminal	domain
MutL_C	PF08676.11	gi|297622075|ref|YP_003710212.1|	-	9.6e-26	90.3	0.1	2.6e-25	88.9	0.1	1.7	1	1	0	1	1	1	1	MutL	C	terminal	dimerisation	domain
HATPase_c_3	PF13589.6	gi|297622075|ref|YP_003710212.1|	-	1.1e-07	31.7	0.0	2.3e-07	30.7	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.26	gi|297622075|ref|YP_003710212.1|	-	5.1e-05	23.7	0.0	0.00071	20.1	0.0	2.3	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Peptidase_M24	PF00557.24	gi|297622076|ref|YP_003710213.1|	-	4.2e-68	229.2	0.0	5.1e-68	228.9	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|297622076|ref|YP_003710213.1|	-	1.5e-20	74.2	0.0	4.1e-20	72.8	0.0	1.7	2	0	0	2	2	2	1	Creatinase/Prolidase	N-terminal	domain
HTH_7	PF02796.15	gi|297622076|ref|YP_003710213.1|	-	0.048	13.8	0.0	0.19	11.8	0.0	2.0	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HATPase_c	PF02518.26	gi|297622077|ref|YP_003710214.1|	-	5.7e-25	88.0	0.0	1.2e-24	87.0	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HisKA	PF00512.25	gi|297622077|ref|YP_003710214.1|	-	9.5e-14	51.2	0.0	2.5e-13	49.9	0.0	1.8	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
PAS	PF00989.25	gi|297622077|ref|YP_003710214.1|	-	1.5e-08	34.6	0.0	2.9e-08	33.7	0.0	1.5	1	0	0	1	1	1	1	PAS	fold
PAS_4	PF08448.10	gi|297622077|ref|YP_003710214.1|	-	1.5e-06	28.4	0.0	3e-06	27.4	0.0	1.5	1	0	0	1	1	1	1	PAS	fold
HATPase_c_3	PF13589.6	gi|297622077|ref|YP_003710214.1|	-	2.8e-06	27.2	0.0	7.1e-06	25.9	0.0	1.7	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_8	PF13188.7	gi|297622077|ref|YP_003710214.1|	-	1.5e-05	24.9	0.0	4e-05	23.5	0.0	1.7	1	0	0	1	1	1	1	PAS	domain
PAS_9	PF13426.7	gi|297622077|ref|YP_003710214.1|	-	4.1e-05	23.8	0.0	0.00016	21.9	0.0	2.0	2	0	0	2	2	2	1	PAS	domain
HATPase_c_5	PF14501.6	gi|297622077|ref|YP_003710214.1|	-	0.0024	17.8	0.0	0.0071	16.2	0.0	1.8	1	0	0	1	1	1	1	GHKL	domain
HAMP	PF00672.25	gi|297622077|ref|YP_003710214.1|	-	0.0043	17.4	0.0	0.014	15.8	0.0	2.0	1	0	0	1	1	1	1	HAMP	domain
PAS_12	PF18095.1	gi|297622077|ref|YP_003710214.1|	-	0.031	13.9	0.1	0.096	12.3	0.1	1.8	1	0	0	1	1	1	0	UPF0242	C-terminal	PAS-like	domain
ASL_C2	PF14698.6	gi|297622077|ref|YP_003710214.1|	-	0.049	14.4	0.0	0.17	12.6	0.0	2.0	2	0	0	2	2	1	0	Argininosuccinate	lyase	C-terminal
HATPase_c_2	PF13581.6	gi|297622077|ref|YP_003710214.1|	-	0.15	12.0	0.0	0.36	10.8	0.0	1.5	1	0	0	1	1	1	0	Histidine	kinase-like	ATPase	domain
AAA_3	PF07726.11	gi|297622078|ref|YP_003710215.1|	-	1.1e-65	219.4	0.1	1.9e-65	218.6	0.1	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_2	PF17863.1	gi|297622078|ref|YP_003710215.1|	-	8.8e-18	63.9	0.1	1.6e-17	63.1	0.1	1.4	1	0	0	1	1	1	1	AAA	lid	domain
AAA_5	PF07728.14	gi|297622078|ref|YP_003710215.1|	-	1.4e-12	47.8	0.0	2.8e-12	46.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Sigma54_activat	PF00158.26	gi|297622078|ref|YP_003710215.1|	-	1.8e-06	27.8	0.0	4.1e-06	26.6	0.0	1.6	1	1	0	1	1	1	1	Sigma-54	interaction	domain
MCM	PF00493.23	gi|297622078|ref|YP_003710215.1|	-	0.00022	20.4	0.0	0.00035	19.8	0.0	1.3	1	0	0	1	1	1	1	MCM	P-loop	domain
AAA	PF00004.29	gi|297622078|ref|YP_003710215.1|	-	0.00028	21.3	0.0	0.0012	19.3	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|297622078|ref|YP_003710215.1|	-	0.0014	18.3	0.3	0.026	14.3	0.1	2.7	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Mg_chelatase	PF01078.21	gi|297622078|ref|YP_003710215.1|	-	0.0021	17.5	0.2	0.41	10.0	0.0	2.5	3	0	0	3	3	3	2	Magnesium	chelatase,	subunit	ChlI
DUF58	PF01882.18	gi|297622079|ref|YP_003710216.1|	-	2.8e-22	78.8	0.0	5e-22	78.0	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
VWA_2	PF13519.6	gi|297622079|ref|YP_003710216.1|	-	2.6e-14	53.7	0.0	9e-14	52.0	0.0	1.8	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.28	gi|297622079|ref|YP_003710216.1|	-	0.002	18.4	0.0	0.0054	17.0	0.0	1.8	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
DUF4381	PF14316.6	gi|297622080|ref|YP_003710217.1|	-	0.01	16.1	0.0	0.015	15.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4381)
DDE_Tnp_1	PF01609.21	gi|297622082|ref|YP_003710219.1|	-	5e-05	23.0	0.0	5.9e-05	22.8	0.0	1.1	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.6	gi|297622082|ref|YP_003710219.1|	-	0.00045	20.3	0.0	0.00048	20.2	0.0	1.0	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.6	gi|297622083|ref|YP_003710220.1|	-	3.9e-14	52.9	0.0	5.5e-14	52.5	0.0	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.21	gi|297622083|ref|YP_003710220.1|	-	6e-10	39.1	0.1	1.8e-09	37.6	0.1	1.7	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.6	gi|297622083|ref|YP_003710220.1|	-	3.6e-05	23.5	0.0	5.7e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
Phosphorylase	PF00343.20	gi|297622085|ref|YP_003710222.1|	-	5.9e-37	127.3	0.1	1e-24	86.9	0.1	3.2	2	1	1	3	3	3	3	Carbohydrate	phosphorylase
DUF3416	PF11896.8	gi|297622086|ref|YP_003710223.1|	-	6.7e-50	169.8	0.0	9.9e-50	169.3	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3416)
Alpha-amylase	PF00128.24	gi|297622086|ref|YP_003710223.1|	-	3.8e-05	23.4	3.1	0.00064	19.4	0.0	3.4	2	1	2	4	4	4	1	Alpha	amylase,	catalytic	domain
GHL6	PF14871.6	gi|297622086|ref|YP_003710223.1|	-	0.0018	18.4	0.0	0.0044	17.2	0.0	1.6	1	0	0	1	1	1	1	Hypothetical	glycosyl	hydrolase	6
DUF5060	PF16586.5	gi|297622086|ref|YP_003710223.1|	-	0.041	14.3	0.1	0.12	12.8	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5060)
Alpha-amylase	PF00128.24	gi|297622087|ref|YP_003710224.1|	-	2.5e-79	267.3	0.6	5.3e-79	266.2	0.6	1.5	1	1	0	1	1	1	1	Alpha	amylase,	catalytic	domain
Malt_amylase_C	PF16657.5	gi|297622087|ref|YP_003710224.1|	-	3.7e-21	75.0	0.0	8.6e-21	73.8	0.0	1.7	1	0	0	1	1	1	1	Maltogenic	Amylase,	C-terminal	domain
Mak_N_cap	PF18085.1	gi|297622087|ref|YP_003710224.1|	-	1.5e-05	26.0	0.0	3.4e-05	24.8	0.0	1.7	1	0	0	1	1	1	1	Maltokinase	N-terminal	cap	domain
APH	PF01636.23	gi|297622087|ref|YP_003710224.1|	-	3.9e-05	23.7	0.0	0.0001	22.4	0.0	1.7	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
Alpha-amylase_C	PF02806.18	gi|297622087|ref|YP_003710224.1|	-	0.0034	17.8	0.0	0.0096	16.4	0.0	1.7	1	0	0	1	1	1	1	Alpha	amylase,	C-terminal	all-beta	domain
Glyco_hydro_77	PF02446.17	gi|297622087|ref|YP_003710224.1|	-	0.0096	14.8	0.0	0.018	13.9	0.0	1.4	1	0	0	1	1	1	1	4-alpha-glucanotransferase
hDGE_amylase	PF14701.6	gi|297622087|ref|YP_003710224.1|	-	0.051	12.7	0.0	0.1	11.7	0.0	1.4	1	0	0	1	1	1	0	Glycogen	debranching	enzyme,	glucanotransferase	domain
Alpha-amylase_C	PF02806.18	gi|297622088|ref|YP_003710225.1|	-	7.3e-21	74.5	0.0	2.7e-20	72.6	0.0	2.0	2	0	0	2	2	2	1	Alpha	amylase,	C-terminal	all-beta	domain
CBM_48	PF02922.18	gi|297622088|ref|YP_003710225.1|	-	1.8e-20	73.1	0.3	5.6e-20	71.5	0.2	2.0	2	0	0	2	2	2	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Alpha-amylase	PF00128.24	gi|297622088|ref|YP_003710225.1|	-	2e-12	47.3	0.1	1e-07	31.9	0.1	2.6	2	1	1	3	3	3	2	Alpha	amylase,	catalytic	domain
Glyco_hydro_70	PF02324.16	gi|297622088|ref|YP_003710225.1|	-	0.012	13.8	0.0	0.025	12.8	0.0	1.4	2	0	0	2	2	2	0	Glycosyl	hydrolase	family	70
AMPK1_CBM	PF16561.5	gi|297622088|ref|YP_003710225.1|	-	2.3	8.5	4.6	0.41	10.9	0.2	2.1	2	0	0	2	2	2	0	Glycogen	recognition	site	of	AMP-activated	protein	kinase
Transposase_mut	PF00872.18	gi|297622090|ref|YP_003710227.1|	-	0.00022	20.2	0.0	0.00028	19.9	0.0	1.1	1	0	0	1	1	1	1	Transposase,	Mutator	family
HTH_Tnp_1	PF01527.20	gi|297622091|ref|YP_003710228.1|	-	2.3e-19	69.5	0.2	2.8e-19	69.2	0.2	1.1	1	0	0	1	1	1	1	Transposase
HTH_23	PF13384.6	gi|297622091|ref|YP_003710228.1|	-	3e-06	26.8	0.0	6.2e-06	25.8	0.0	1.6	1	1	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|297622091|ref|YP_003710228.1|	-	4.3e-05	23.6	0.0	7.2e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_IS630	PF01710.16	gi|297622091|ref|YP_003710228.1|	-	0.00017	21.6	0.3	0.0002	21.4	0.3	1.1	1	0	0	1	1	1	1	Transposase
HTH_Tnp_1_2	PF13022.6	gi|297622091|ref|YP_003710228.1|	-	0.0004	20.5	0.3	0.00065	19.9	0.3	1.4	1	1	0	1	1	1	1	Helix-turn-helix	of	insertion	element	transposase
HTH_29	PF13551.6	gi|297622091|ref|YP_003710228.1|	-	0.00082	19.3	0.1	0.0016	18.4	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
DUF1153	PF06627.11	gi|297622091|ref|YP_003710228.1|	-	0.0019	18.3	0.1	0.0031	17.6	0.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1153)
HTH_17	PF12728.7	gi|297622091|ref|YP_003710228.1|	-	0.0043	17.2	0.1	0.0084	16.3	0.0	1.7	2	1	0	2	2	2	1	Helix-turn-helix	domain
CreD	PF06123.12	gi|297622091|ref|YP_003710228.1|	-	0.024	13.5	0.1	0.024	13.4	0.1	1.0	1	0	0	1	1	1	0	Inner	membrane	protein	CreD
NusG_add	PF18298.1	gi|297622091|ref|YP_003710228.1|	-	0.057	13.6	0.0	0.075	13.3	0.0	1.3	1	1	0	1	1	1	0	NusG	additional	domain
HTH_psq	PF05225.16	gi|297622091|ref|YP_003710228.1|	-	0.11	12.3	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
rve	PF00665.26	gi|297622092|ref|YP_003710229.1|	-	1.1e-22	80.5	0.1	3.1e-22	79.0	0.0	1.6	2	0	0	2	2	2	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297622092|ref|YP_003710229.1|	-	1.6e-12	47.4	7.3	2.4e-12	46.8	6.4	1.8	1	1	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.6	gi|297622092|ref|YP_003710229.1|	-	6.9e-08	32.2	0.1	2.1e-07	30.6	0.1	1.8	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297622092|ref|YP_003710229.1|	-	0.022	15.4	2.9	0.031	14.9	0.2	2.4	1	1	1	2	2	2	0	Homeodomain-like	domain
IstB_IS21	PF01695.17	gi|297622093|ref|YP_003710230.1|	-	2.2e-61	206.7	0.2	5e-61	205.5	0.1	1.6	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
Bac_DnaA	PF00308.18	gi|297622093|ref|YP_003710230.1|	-	1.3e-08	35.0	0.0	2e-08	34.4	0.0	1.2	1	0	0	1	1	1	1	Bacterial	dnaA	protein
PhoH	PF02562.16	gi|297622093|ref|YP_003710230.1|	-	0.00074	19.0	0.1	0.0019	17.7	0.1	1.7	1	1	0	1	1	1	1	PhoH-like	protein
AAA	PF00004.29	gi|297622093|ref|YP_003710230.1|	-	0.0041	17.5	0.0	0.0084	16.5	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|297622093|ref|YP_003710230.1|	-	0.017	15.4	0.1	0.19	12.0	0.1	2.4	1	1	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|297622093|ref|YP_003710230.1|	-	0.017	15.0	0.0	0.035	14.0	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
AAA_16	PF13191.6	gi|297622093|ref|YP_003710230.1|	-	0.021	15.2	0.3	0.04	14.3	0.1	1.8	2	1	0	2	2	2	0	AAA	ATPase	domain
ResIII	PF04851.15	gi|297622093|ref|YP_003710230.1|	-	0.026	14.5	0.1	0.037	14.0	0.1	1.6	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_18	PF13238.6	gi|297622093|ref|YP_003710230.1|	-	0.088	13.4	0.1	0.25	11.9	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
AAA_25	PF13481.6	gi|297622093|ref|YP_003710230.1|	-	0.12	12.0	0.0	0.22	11.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
CbiA	PF01656.23	gi|297622093|ref|YP_003710230.1|	-	0.12	12.4	0.0	0.26	11.3	0.0	1.7	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_33	PF13671.6	gi|297622093|ref|YP_003710230.1|	-	0.13	12.5	0.1	0.35	11.0	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_31	PF13614.6	gi|297622093|ref|YP_003710230.1|	-	0.14	12.1	0.6	1.3	9.0	0.2	2.5	2	1	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|297622093|ref|YP_003710230.1|	-	0.17	12.4	0.5	0.42	11.1	0.1	2.1	2	1	0	2	2	2	0	ABC	transporter
rve	PF00665.26	gi|297622094|ref|YP_003710231.1|	-	3.8e-26	91.6	0.0	6e-26	91.0	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_38	PF13936.6	gi|297622094|ref|YP_003710231.1|	-	8e-06	25.5	1.7	1e-05	25.2	0.4	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_29	PF13551.6	gi|297622094|ref|YP_003710231.1|	-	0.00012	22.1	0.0	0.00027	20.9	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_7	PF02796.15	gi|297622094|ref|YP_003710231.1|	-	0.00044	20.3	1.6	0.00072	19.6	0.2	2.1	2	1	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
HTH_23	PF13384.6	gi|297622094|ref|YP_003710231.1|	-	0.0011	18.7	0.1	0.0027	17.4	0.1	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
TnsD	PF15978.5	gi|297622094|ref|YP_003710231.1|	-	0.01	14.9	0.1	0.017	14.2	0.1	1.4	1	0	0	1	1	1	0	Tn7-like	transposition	protein	D
rve_3	PF13683.6	gi|297622094|ref|YP_003710231.1|	-	0.012	15.4	0.0	0.03	14.1	0.0	1.8	1	0	0	1	1	1	0	Integrase	core	domain
GerE	PF00196.19	gi|297622094|ref|YP_003710231.1|	-	0.014	14.9	0.0	0.026	14.1	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_56	PF18662.1	gi|297622094|ref|YP_003710231.1|	-	0.021	14.9	0.3	1.3	9.1	0.0	2.4	2	0	0	2	2	2	0	Cch	helix	turn	helix	domain
Phage_NinH	PF06322.11	gi|297622094|ref|YP_003710231.1|	-	0.045	13.6	0.0	0.093	12.6	0.0	1.5	1	0	0	1	1	1	0	Phage	NinH	protein
HTH_17	PF12728.7	gi|297622094|ref|YP_003710231.1|	-	0.057	13.6	0.2	0.27	11.5	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_3	PF01381.22	gi|297622094|ref|YP_003710231.1|	-	0.071	13.2	0.1	0.13	12.3	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix
HTH_40	PF14493.6	gi|297622094|ref|YP_003710231.1|	-	0.081	13.4	0.0	0.42	11.1	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_36	PF13730.6	gi|297622094|ref|YP_003710231.1|	-	0.16	12.0	1.1	0.43	10.6	0.1	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_30	PF13556.6	gi|297622094|ref|YP_003710231.1|	-	0.19	11.6	0.0	0.42	10.4	0.0	1.5	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
rve_3	PF13683.6	gi|297622095|ref|YP_003710232.1|	-	1.1e-15	57.2	0.0	1.9e-15	56.4	0.0	1.4	1	0	0	1	1	1	1	Integrase	core	domain
rve_2	PF13333.6	gi|297622095|ref|YP_003710232.1|	-	0.018	15.2	0.0	0.028	14.6	0.0	1.3	1	0	0	1	1	1	0	Integrase	core	domain
DUF2384	PF09722.10	gi|297622095|ref|YP_003710232.1|	-	0.18	11.9	0.0	0.25	11.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2384)
UDG	PF03167.19	gi|297622097|ref|YP_003710234.1|	-	1.1e-21	77.4	0.1	1.5e-21	77.0	0.1	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
DUF4379	PF14311.6	gi|297622099|ref|YP_003710236.1|	-	4.6e-106	347.1	69.9	2.2e-18	66.4	5.9	7.2	7	0	0	7	7	7	7	Probable	Zinc-ribbon	domain
MTES_1575	PF18741.1	gi|297622099|ref|YP_003710236.1|	-	0.00058	20.0	0.0	0.0013	18.8	0.0	1.5	1	0	0	1	1	1	1	REase_MTES_1575
DUF559	PF04480.12	gi|297622099|ref|YP_003710236.1|	-	0.0037	17.1	0.0	0.0087	15.9	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF559)
VEG	PF06257.11	gi|297622099|ref|YP_003710236.1|	-	0.12	12.4	0.0	0.42	10.7	0.0	1.9	1	0	0	1	1	1	0	Biofilm	formation	stimulator	VEG
DNA_primase_lrg	PF04104.14	gi|297622099|ref|YP_003710236.1|	-	0.25	10.7	11.2	0.078	12.4	1.7	3.4	2	1	1	3	3	3	0	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
HypA	PF01155.19	gi|297622099|ref|YP_003710236.1|	-	1.7	8.7	21.4	0.55	10.3	0.5	5.2	5	1	1	6	6	6	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-C3HC4_3	PF13920.6	gi|297622099|ref|YP_003710236.1|	-	4.6	7.2	28.6	0.82	9.6	1.1	6.6	7	0	0	7	7	7	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-Di19	PF05605.12	gi|297622099|ref|YP_003710236.1|	-	6.2	7.2	15.4	83	3.6	0.1	5.9	5	0	0	5	5	5	0	Drought	induced	19	protein	(Di19),	zinc-binding
DUF4379	PF14311.6	gi|297622100|ref|YP_003710237.1|	-	1.2e-175	569.9	120.5	6.6e-21	74.4	3.9	10.4	10	0	0	10	10	10	10	Probable	Zinc-ribbon	domain
Cnn_1N	PF07989.11	gi|297622101|ref|YP_003710238.1|	-	0.018	15.2	0.0	0.089	13.0	0.0	2.3	2	0	0	2	2	2	0	Centrosomin	N-terminal	motif	1
NTPase_1	PF03266.15	gi|297622101|ref|YP_003710238.1|	-	0.19	11.6	0.0	0.42	10.5	0.0	1.5	1	0	0	1	1	1	0	NTPase
DUF3847	PF12958.7	gi|297622101|ref|YP_003710238.1|	-	2.3	8.4	4.4	19	5.5	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3847)
DDE_Tnp_1_assoc	PF13808.6	gi|297622102|ref|YP_003710239.1|	-	3.8e-27	94.1	0.2	2e-26	91.9	0.1	2.1	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.21	gi|297622102|ref|YP_003710239.1|	-	1.6e-18	67.2	0.0	3.6e-18	66.0	0.0	1.5	1	1	0	1	1	1	1	Transposase	DDE	domain
DEK_C	PF08766.11	gi|297622102|ref|YP_003710239.1|	-	0.017	15.0	0.0	0.032	14.1	0.0	1.5	1	0	0	1	1	1	0	DEK	C	terminal	domain
DDE_Tnp_1_4	PF13701.6	gi|297622102|ref|YP_003710239.1|	-	0.05	11.9	0.0	3	6.0	0.0	2.1	2	0	0	2	2	2	0	Transposase	DDE	domain	group	1
rve	PF00665.26	gi|297622103|ref|YP_003710240.1|	-	3.9e-19	69.0	0.0	5.7e-19	68.5	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.6	gi|297622103|ref|YP_003710240.1|	-	3.9e-15	55.7	0.8	8.4e-15	54.7	0.8	1.6	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.6	gi|297622103|ref|YP_003710240.1|	-	1.9e-12	46.8	0.2	3.7e-12	45.8	0.2	1.5	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|297622103|ref|YP_003710240.1|	-	0.0011	19.5	0.4	0.0011	19.5	0.4	2.4	3	0	0	3	3	3	1	Homeodomain-like	domain
rve_2	PF13333.6	gi|297622103|ref|YP_003710240.1|	-	0.01	16.0	1.0	0.021	15.0	1.0	1.5	1	0	0	1	1	1	0	Integrase	core	domain
PsiA	PF06952.11	gi|297622103|ref|YP_003710240.1|	-	0.029	13.6	3.5	0.75	9.0	0.0	2.3	2	1	0	2	2	2	0	PsiA	protein
HTH_Tnp_1	PF01527.20	gi|297622104|ref|YP_003710241.1|	-	9.5e-12	45.1	0.5	1.2e-11	44.7	0.5	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.6	gi|297622104|ref|YP_003710241.1|	-	8.9e-05	22.5	0.0	0.00014	21.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|297622104|ref|YP_003710241.1|	-	0.00023	20.9	0.0	0.00038	20.2	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
DUF4096	PF13340.6	gi|297622105|ref|YP_003710242.1|	-	5.1e-30	103.5	0.9	6.9e-30	103.1	0.9	1.2	1	0	0	1	1	1	1	Putative	transposase	of	IS4/5	family	(DUF4096)
HTH_38	PF13936.6	gi|297622106|ref|YP_003710243.1|	-	8.1e-07	28.7	1.1	2e-06	27.4	0.4	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_29	PF13551.6	gi|297622106|ref|YP_003710243.1|	-	2.3e-05	24.3	0.2	5.5e-05	23.1	0.2	1.8	1	1	0	1	1	1	1	Winged	helix-turn	helix
HTH_7	PF02796.15	gi|297622106|ref|YP_003710243.1|	-	5e-05	23.3	2.4	0.00014	21.8	0.2	2.5	2	1	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
HTH_23	PF13384.6	gi|297622106|ref|YP_003710243.1|	-	0.00027	20.7	0.1	0.00057	19.6	0.1	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
TnsD	PF15978.5	gi|297622106|ref|YP_003710243.1|	-	0.0022	17.1	0.0	0.0022	17.1	0.0	1.1	1	0	0	1	1	1	1	Tn7-like	transposition	protein	D
GerE	PF00196.19	gi|297622106|ref|YP_003710243.1|	-	0.0032	17.0	0.0	0.0055	16.2	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_17	PF12728.7	gi|297622106|ref|YP_003710243.1|	-	0.0088	16.2	0.6	0.052	13.7	0.1	2.4	2	1	0	2	2	2	1	Helix-turn-helix	domain
Phage_NinH	PF06322.11	gi|297622106|ref|YP_003710243.1|	-	0.011	15.6	0.0	0.02	14.8	0.0	1.4	1	0	0	1	1	1	0	Phage	NinH	protein
HTH_3	PF01381.22	gi|297622106|ref|YP_003710243.1|	-	0.013	15.5	0.1	0.025	14.6	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix
HTH_40	PF14493.6	gi|297622106|ref|YP_003710243.1|	-	0.039	14.4	0.0	0.064	13.7	0.0	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_30	PF13556.6	gi|297622106|ref|YP_003710243.1|	-	0.04	13.7	0.1	0.089	12.6	0.0	1.6	2	0	0	2	2	2	0	PucR	C-terminal	helix-turn-helix	domain
HTH_11	PF08279.12	gi|297622106|ref|YP_003710243.1|	-	0.051	13.5	0.5	0.2	11.6	0.1	2.1	2	1	0	2	2	2	0	HTH	domain
HTH_36	PF13730.6	gi|297622106|ref|YP_003710243.1|	-	0.052	13.5	0.1	0.099	12.6	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Terminase_5	PF06056.12	gi|297622106|ref|YP_003710243.1|	-	0.098	12.6	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_Tnp_Tc3_1	PF11427.8	gi|297622106|ref|YP_003710243.1|	-	0.1	12.5	0.3	0.16	11.8	0.3	1.3	1	0	0	1	1	1	0	Tc3	transposase
HTH_22	PF13309.6	gi|297622106|ref|YP_003710243.1|	-	0.14	12.2	0.0	0.3	11.2	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
DUF1722	PF08349.11	gi|297622107|ref|YP_003710244.1|	-	0.021	15.1	0.0	0.089	13.1	0.0	2.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1722)
Pkinase	PF00069.25	gi|297622107|ref|YP_003710244.1|	-	0.035	13.5	0.2	0.043	13.2	0.2	1.1	1	0	0	1	1	1	0	Protein	kinase	domain
RIO1	PF01163.22	gi|297622107|ref|YP_003710244.1|	-	0.094	12.3	0.1	0.13	11.8	0.1	1.2	1	0	0	1	1	1	0	RIO1	family
Transposase_mut	PF00872.18	gi|297622108|ref|YP_003710245.1|	-	1.6e-71	241.2	0.0	1.9e-71	240.9	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297622108|ref|YP_003710245.1|	-	1.4e-05	25.4	0.0	5e-05	23.6	0.0	2.0	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.6	gi|297622108|ref|YP_003710245.1|	-	0.028	14.7	0.2	0.27	11.5	0.0	2.7	2	1	0	2	2	2	0	DDE	domain
HTH_ABP1_N	PF18107.1	gi|297622109|ref|YP_003710246.1|	-	0.074	12.8	0.3	0.097	12.4	0.3	1.3	1	0	0	1	1	1	0	Fission	yeast	centromere	protein	N-terminal	domain
Alpha-amylase	PF00128.24	gi|297622110|ref|YP_003710247.1|	-	2.8e-19	69.9	0.1	2.5e-12	47.0	0.0	3.3	1	1	1	2	2	2	2	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.18	gi|297622110|ref|YP_003710247.1|	-	2.7e-16	59.7	0.3	4.8e-15	55.7	0.0	2.8	2	1	1	3	3	3	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
GlgX_C	PF18390.1	gi|297622110|ref|YP_003710247.1|	-	0.04	13.7	0.0	0.091	12.6	0.0	1.5	1	0	0	1	1	1	0	Glycogen	debranching	enzyme	C-terminal	domain
Alpha-amylase_C	PF02806.18	gi|297622110|ref|YP_003710247.1|	-	0.051	14.1	0.0	0.82	10.2	0.0	2.5	2	0	0	2	2	2	0	Alpha	amylase,	C-terminal	all-beta	domain
Apis_Csd	PF11671.8	gi|297622111|ref|YP_003710248.1|	-	0.038	14.0	1.7	0.065	13.3	1.7	1.4	1	0	0	1	1	1	0	Complementary	sex	determiner	protein
DUF4266	PF14086.6	gi|297622111|ref|YP_003710248.1|	-	0.34	11.9	2.2	0.73	10.8	2.2	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4266)
DUF1494	PF07379.11	gi|297622112|ref|YP_003710249.1|	-	7.4e-05	22.7	0.3	0.0036	17.2	0.3	2.2	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1494)
T2SSJ	PF11612.8	gi|297622112|ref|YP_003710249.1|	-	0.0027	17.9	0.1	0.0048	17.1	0.1	1.3	1	0	0	1	1	1	1	Type	II	secretion	system	(T2SS),	protein	J
N_methyl	PF07963.12	gi|297622112|ref|YP_003710249.1|	-	1.3	8.7	8.5	2.7	7.7	8.5	1.5	1	0	0	1	1	1	0	Prokaryotic	N-terminal	methylation	motif
Ran-binding	PF05508.11	gi|297622113|ref|YP_003710250.1|	-	0.036	13.0	0.0	0.053	12.5	0.0	1.3	1	0	0	1	1	1	0	RanGTP-binding	protein
N_methyl	PF07963.12	gi|297622114|ref|YP_003710251.1|	-	0.093	12.3	7.1	0.16	11.6	7.1	1.4	1	0	0	1	1	1	0	Prokaryotic	N-terminal	methylation	motif
N_methyl	PF07963.12	gi|297622115|ref|YP_003710252.1|	-	0.0076	15.8	10.0	0.012	15.2	10.0	1.3	1	0	0	1	1	1	1	Prokaryotic	N-terminal	methylation	motif
Pkinase	PF00069.25	gi|297622116|ref|YP_003710253.1|	-	2.8e-13	49.9	0.0	5e-13	49.0	0.0	1.4	1	0	0	1	1	1	1	Protein	kinase	domain
Cor1	PF04803.12	gi|297622116|ref|YP_003710253.1|	-	0.14	12.3	2.6	0.95	9.7	0.5	2.9	3	0	0	3	3	3	0	Cor1/Xlr/Xmr	conserved	region
APH	PF01636.23	gi|297622117|ref|YP_003710254.1|	-	5.6e-07	29.7	0.0	8.9e-07	29.1	0.0	1.2	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
T2SSF	PF00482.23	gi|297622118|ref|YP_003710255.1|	-	2.3e-55	185.9	7.2	5.1e-29	100.8	0.4	2.2	2	0	0	2	2	2	2	Type	II	secretion	system	(T2SS),	protein	F
DUF2207	PF09972.9	gi|297622118|ref|YP_003710255.1|	-	0.00029	19.7	0.7	0.0067	15.2	0.1	2.0	2	0	0	2	2	2	2	Predicted	membrane	protein	(DUF2207)
CobU	PF02283.16	gi|297622118|ref|YP_003710255.1|	-	0.013	15.0	0.1	0.023	14.3	0.1	1.4	1	0	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
MtrF	PF09472.10	gi|297622118|ref|YP_003710255.1|	-	6.3	6.3	8.4	0.45	10.0	0.4	2.6	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
T2SSE	PF00437.20	gi|297622119|ref|YP_003710256.1|	-	4.6e-85	285.0	1.0	6.3e-85	284.5	1.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
T2SSE_N	PF05157.15	gi|297622119|ref|YP_003710256.1|	-	1e-17	64.4	0.0	3.1e-17	62.8	0.0	1.8	2	0	0	2	2	2	1	Type	II	secretion	system	(T2SS),	protein	E,	N-terminal	domain
AAA_14	PF13173.6	gi|297622119|ref|YP_003710256.1|	-	0.0027	17.8	0.0	0.0077	16.3	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|297622119|ref|YP_003710256.1|	-	0.0028	18.0	0.0	0.0061	17.0	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|297622119|ref|YP_003710256.1|	-	0.0044	16.7	0.0	0.0097	15.6	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
zinc_ribbon_5	PF13719.6	gi|297622119|ref|YP_003710256.1|	-	0.0046	16.7	0.0	0.0087	15.8	0.0	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
AAA_19	PF13245.6	gi|297622119|ref|YP_003710256.1|	-	0.0047	17.3	0.1	0.014	15.7	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|297622119|ref|YP_003710256.1|	-	0.0051	17.1	0.0	0.0099	16.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_23	PF13476.6	gi|297622119|ref|YP_003710256.1|	-	0.0073	16.8	0.1	0.014	15.9	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|297622119|ref|YP_003710256.1|	-	0.029	14.1	0.0	0.051	13.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.15	gi|297622119|ref|YP_003710256.1|	-	0.033	14.1	0.2	0.25	11.3	0.1	2.2	2	0	0	2	2	2	0	NTPase
AAA	PF00004.29	gi|297622119|ref|YP_003710256.1|	-	0.052	14.0	0.0	0.12	12.8	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|297622119|ref|YP_003710256.1|	-	0.059	13.3	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_7	PF12775.7	gi|297622119|ref|YP_003710256.1|	-	0.069	12.7	0.0	0.13	11.7	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
ResIII	PF04851.15	gi|297622119|ref|YP_003710256.1|	-	0.075	13.0	0.0	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
Rad17	PF03215.15	gi|297622119|ref|YP_003710256.1|	-	0.087	12.7	0.0	0.16	11.9	0.0	1.3	1	0	0	1	1	1	0	Rad17	P-loop	domain
DEAD	PF00270.29	gi|297622119|ref|YP_003710256.1|	-	0.096	12.4	0.3	0.42	10.4	0.2	1.9	1	1	1	2	2	2	0	DEAD/DEAH	box	helicase
AAA_11	PF13086.6	gi|297622119|ref|YP_003710256.1|	-	0.1	12.4	0.0	0.18	11.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|297622119|ref|YP_003710256.1|	-	0.14	12.6	0.0	0.31	11.5	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
Secretin	PF00263.21	gi|297622120|ref|YP_003710257.1|	-	4.6e-33	114.3	3.0	8.7e-33	113.4	3.0	1.5	1	0	0	1	1	1	1	Bacterial	type	II	and	III	secretion	system	protein
Secretin_N	PF03958.17	gi|297622120|ref|YP_003710257.1|	-	1.4e-13	51.0	0.4	7.8e-07	29.4	0.0	3.1	2	0	0	2	2	2	2	Bacterial	type	II/III	secretion	system	short	domain
Phage_lysis	PF03245.13	gi|297622120|ref|YP_003710257.1|	-	0.65	10.1	4.0	1e+02	3.0	0.0	3.4	2	1	1	3	3	3	0	Bacteriophage	Rz	lysis	protein
DUF4404	PF14357.6	gi|297622120|ref|YP_003710257.1|	-	1.2	9.8	6.8	1.7	9.3	1.3	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4404)
Spc24	PF08286.11	gi|297622120|ref|YP_003710257.1|	-	2.6	8.3	4.5	7.3	6.9	0.3	2.6	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
bPH_5	PF10882.8	gi|297622121|ref|YP_003710258.1|	-	0.063	13.4	0.2	0.79	9.8	0.0	2.7	3	0	0	3	3	3	0	Bacterial	PH	domain
DUF2207	PF09972.9	gi|297622122|ref|YP_003710259.1|	-	0.008	15.0	0.5	0.0097	14.7	0.5	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
EMC3_TMCO1	PF01956.16	gi|297622122|ref|YP_003710259.1|	-	0.021	14.6	0.2	0.034	13.9	0.2	1.3	1	0	0	1	1	1	0	Integral	membrane	protein	EMC3/TMCO1-like
Glycos_transf_1	PF00534.20	gi|297622122|ref|YP_003710259.1|	-	0.043	13.4	0.1	0.055	13.0	0.1	1.2	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
ORC4_C	PF14629.6	gi|297622122|ref|YP_003710259.1|	-	0.066	12.6	0.0	0.072	12.4	0.0	1.2	1	0	0	1	1	1	0	Origin	recognition	complex	(ORC)	subunit	4	C-terminus
NQRA	PF05896.11	gi|297622124|ref|YP_003710261.1|	-	2.4e-80	269.7	0.2	3.1e-80	269.3	0.2	1.1	1	0	0	1	1	1	1	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
NQRA_SLBB	PF11973.8	gi|297622124|ref|YP_003710261.1|	-	2.4e-12	47.3	0.2	4.7e-12	46.4	0.2	1.5	1	0	0	1	1	1	1	NQRA	C-terminal	domain
RnfC_N	PF13375.6	gi|297622124|ref|YP_003710261.1|	-	0.0026	17.7	0.0	0.0064	16.4	0.0	1.6	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
Biotin_lipoyl_2	PF13533.6	gi|297622124|ref|YP_003710261.1|	-	0.096	12.5	0.8	2.7	7.9	0.0	3.0	3	0	0	3	3	3	0	Biotin-lipoyl	like
MS_channel	PF00924.18	gi|297622125|ref|YP_003710262.1|	-	1e-53	181.9	2.1	1e-53	181.9	2.1	2.0	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
DUF2608	PF11019.8	gi|297622126|ref|YP_003710263.1|	-	9.8e-76	254.5	0.0	1.1e-75	254.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2608)
Acid_phosphat_B	PF03767.14	gi|297622126|ref|YP_003710263.1|	-	0.00021	20.9	0.0	0.00065	19.4	0.0	1.7	1	1	0	1	1	1	1	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
Hydrolase	PF00702.26	gi|297622126|ref|YP_003710263.1|	-	0.0024	18.2	0.1	0.39	11.0	0.0	2.3	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|297622126|ref|YP_003710263.1|	-	0.014	15.5	0.5	1.2	9.2	0.0	2.9	2	1	1	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
UPF0180	PF03698.13	gi|297622126|ref|YP_003710263.1|	-	0.097	12.9	0.0	0.34	11.1	0.0	1.9	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
GDPD	PF03009.17	gi|297622127|ref|YP_003710264.1|	-	7.7e-39	134.0	0.0	2.5e-38	132.3	0.0	1.8	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
GDPD_2	PF13653.6	gi|297622127|ref|YP_003710264.1|	-	0.0086	16.5	0.4	0.016	15.7	0.4	1.5	1	0	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
Aldedh	PF00171.22	gi|297622129|ref|YP_003710266.1|	-	3.3e-137	457.8	0.0	3.8e-137	457.6	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
DUF5022	PF16425.5	gi|297622129|ref|YP_003710266.1|	-	0.002	17.6	0.0	0.0034	16.9	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5022)
PhzC-PhzF	PF02567.16	gi|297622131|ref|YP_003710268.1|	-	8.1e-45	153.5	0.0	1.7e-44	152.4	0.0	1.4	1	1	0	1	1	1	1	Phenazine	biosynthesis-like	protein
Pro_racemase	PF05544.11	gi|297622131|ref|YP_003710268.1|	-	0.00034	19.8	0.0	0.00048	19.3	0.0	1.1	1	0	0	1	1	1	1	Proline	racemase
DAP_epimerase	PF01678.19	gi|297622131|ref|YP_003710268.1|	-	0.0021	18.2	0.0	0.0038	17.4	0.0	1.4	1	0	0	1	1	1	1	Diaminopimelate	epimerase
Glyco_hydro_10	PF00331.20	gi|297622132|ref|YP_003710269.1|	-	0.023	13.8	0.2	0.025	13.8	0.2	1.0	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	10
Connexin	PF00029.19	gi|297622132|ref|YP_003710269.1|	-	0.87	9.3	4.2	1	9.0	4.2	1.1	1	0	0	1	1	1	0	Connexin
Presenilin	PF01080.17	gi|297622132|ref|YP_003710269.1|	-	1.6	7.4	4.7	1.6	7.4	4.7	1.0	1	0	0	1	1	1	0	Presenilin
Conotoxin	PF02950.17	gi|297622132|ref|YP_003710269.1|	-	2.3	9.3	8.5	1.3e+02	3.7	8.5	2.1	1	1	0	1	1	1	0	Conotoxin
Peptidase_S8	PF00082.22	gi|297622134|ref|YP_003710271.1|	-	5.2e-44	150.7	4.8	7.6e-44	150.2	4.8	1.2	1	0	0	1	1	1	1	Subtilase	family
Inhibitor_I9	PF05922.16	gi|297622134|ref|YP_003710271.1|	-	0.0021	18.7	0.4	0.059	14.0	0.4	2.4	1	1	0	1	1	1	1	Peptidase	inhibitor	I9
PBP_dimer	PF03717.15	gi|297622136|ref|YP_003710273.1|	-	9.8e-42	143.3	1.1	4.3e-41	141.2	1.1	2.1	1	1	0	1	1	1	1	Penicillin-binding	Protein	dimerisation	domain
Transpeptidase	PF00905.22	gi|297622136|ref|YP_003710273.1|	-	7.5e-28	97.6	0.0	1.9e-22	79.9	0.0	3.2	3	0	0	3	3	3	2	Penicillin	binding	protein	transpeptidase	domain
Ribosomal_S2	PF00318.20	gi|297622137|ref|YP_003710274.1|	-	9.6e-90	299.5	0.1	1.2e-89	299.2	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S2
ATPgrasp_TupA	PF14305.6	gi|297622137|ref|YP_003710274.1|	-	0.0065	16.3	0.9	0.027	14.3	0.5	1.9	1	1	1	2	2	2	1	TupA-like	ATPgrasp
Phosphatase	PF15698.5	gi|297622137|ref|YP_003710274.1|	-	0.018	14.2	0.0	0.055	12.6	0.0	1.7	1	1	0	1	1	1	0	Phosphatase
SIS_2	PF13580.6	gi|297622137|ref|YP_003710274.1|	-	0.1	12.6	0.2	0.57	10.2	0.0	2.0	2	0	0	2	2	2	0	SIS	domain
EF_TS	PF00889.19	gi|297622138|ref|YP_003710275.1|	-	5.1e-62	209.2	3.9	6.8e-62	208.8	3.9	1.1	1	0	0	1	1	1	1	Elongation	factor	TS
UBA_4	PF14555.6	gi|297622138|ref|YP_003710275.1|	-	0.032	14.1	0.1	0.11	12.3	0.0	2.0	2	0	0	2	2	2	0	UBA-like	domain
CUE	PF02845.16	gi|297622138|ref|YP_003710275.1|	-	0.074	12.8	0.0	1.4	8.7	0.1	2.3	2	0	0	2	2	2	0	CUE	domain
TAP_C	PF03943.13	gi|297622138|ref|YP_003710275.1|	-	0.1	12.3	0.0	0.3	10.8	0.0	1.8	2	0	0	2	2	2	0	TAP	C-terminal	domain
AA_kinase	PF00696.28	gi|297622139|ref|YP_003710276.1|	-	4.3e-28	98.5	0.2	5.5e-28	98.2	0.2	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
WSN	PF02206.18	gi|297622139|ref|YP_003710276.1|	-	0.012	15.5	0.1	0.043	13.7	0.1	2.0	1	0	0	1	1	1	0	Domain	of	unknown	function
MepB	PF08877.10	gi|297622139|ref|YP_003710276.1|	-	0.08	12.6	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	MepB	protein
RRF	PF01765.19	gi|297622140|ref|YP_003710277.1|	-	4.1e-50	169.9	5.7	5.2e-50	169.5	5.7	1.1	1	0	0	1	1	1	1	Ribosome	recycling	factor
Fzo_mitofusin	PF04799.13	gi|297622140|ref|YP_003710277.1|	-	0.78	9.3	3.2	3.9	7.0	0.1	2.3	2	0	0	2	2	2	0	fzo-like	conserved	region
UVR	PF02151.19	gi|297622141|ref|YP_003710278.1|	-	7.4e-06	25.5	4.6	1.2e-05	24.9	4.6	1.4	1	0	0	1	1	1	1	UvrB/uvrC	motif
DZR	PF12773.7	gi|297622141|ref|YP_003710278.1|	-	0.045	13.8	8.3	0.32	11.0	0.4	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
zf-C2H2_12	PF18658.1	gi|297622141|ref|YP_003710278.1|	-	0.16	11.6	1.1	0.37	10.4	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	C2H2-type
DNA_RNApol_7kD	PF03604.13	gi|297622141|ref|YP_003710278.1|	-	0.33	10.7	5.9	0.88	9.3	1.2	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.12	gi|297622141|ref|YP_003710278.1|	-	0.5	9.9	5.8	0.55	9.8	0.3	3.0	2	1	1	3	3	3	0	TFIIB	zinc-binding
Zn_ribbon_recom	PF13408.6	gi|297622141|ref|YP_003710278.1|	-	0.81	10.3	8.4	2.7	8.6	0.6	2.7	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
DUF2318	PF10080.9	gi|297622141|ref|YP_003710278.1|	-	5.9	7.1	9.9	11	6.2	4.0	2.4	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2318)
zf-FPG_IleRS	PF06827.14	gi|297622141|ref|YP_003710278.1|	-	9	6.3	9.0	0.61	10.0	0.7	2.9	3	1	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
ATP-gua_Ptrans	PF00217.19	gi|297622142|ref|YP_003710279.1|	-	6.9e-27	94.3	0.3	9.4e-27	93.9	0.3	1.2	1	0	0	1	1	1	1	ATP:guanido	phosphotransferase,	C-terminal	catalytic	domain
Peptidase_S15	PF02129.18	gi|297622143|ref|YP_003710280.1|	-	5.6e-46	157.3	1.5	3e-32	112.3	0.3	2.3	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
PepX_C	PF08530.10	gi|297622143|ref|YP_003710280.1|	-	2.3e-37	129.1	0.0	3.1e-37	128.7	0.0	1.2	1	0	0	1	1	1	1	X-Pro	dipeptidyl-peptidase	C-terminal	non-catalytic	domain
Ribosomal_S20p	PF01649.18	gi|297622145|ref|YP_003710282.1|	-	8.6e-19	68.0	10.7	1.6e-18	67.1	10.7	1.5	1	1	0	1	1	1	1	Ribosomal	protein	S20
PseudoU_synth_2	PF00849.22	gi|297622146|ref|YP_003710283.1|	-	2.8e-28	99.0	0.5	3.8e-28	98.6	0.5	1.2	1	0	0	1	1	1	1	RNA	pseudouridylate	synthase
DUF1467	PF07330.12	gi|297622147|ref|YP_003710284.1|	-	0.035	14.0	0.4	6.1	6.8	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1467)
PAS_12	PF18095.1	gi|297622149|ref|YP_003710286.1|	-	7.9e-68	226.9	0.8	1.3e-67	226.2	0.0	1.8	2	0	0	2	2	2	1	UPF0242	C-terminal	PAS-like	domain
UPF0242	PF06785.11	gi|297622149|ref|YP_003710286.1|	-	5.2e-53	180.0	15.6	7.6e-53	179.5	15.6	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
HOOK	PF05622.12	gi|297622149|ref|YP_003710286.1|	-	0.00037	18.8	14.8	0.00057	18.2	14.8	1.2	1	0	0	1	1	1	1	HOOK	protein
Fib_alpha	PF08702.10	gi|297622149|ref|YP_003710286.1|	-	0.0087	16.2	14.7	0.018	15.3	14.7	1.5	1	0	0	1	1	1	1	Fibrinogen	alpha/beta	chain	family
Atg14	PF10186.9	gi|297622149|ref|YP_003710286.1|	-	0.011	14.8	15.9	0.016	14.3	15.9	1.2	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
PAS_9	PF13426.7	gi|297622149|ref|YP_003710286.1|	-	0.015	15.5	2.1	0.023	15.0	0.1	2.2	2	1	0	2	2	2	0	PAS	domain
Sin3_corepress	PF08295.12	gi|297622149|ref|YP_003710286.1|	-	0.042	13.9	3.1	0.13	12.3	2.9	2.0	1	1	0	1	1	1	0	Sin3	family	co-repressor
Spc7	PF08317.11	gi|297622149|ref|YP_003710286.1|	-	0.089	11.7	25.9	0.13	11.1	25.9	1.2	1	0	0	1	1	1	0	Spc7	kinetochore	protein
AAA_13	PF13166.6	gi|297622149|ref|YP_003710286.1|	-	0.089	11.4	15.8	0.13	10.9	15.8	1.1	1	0	0	1	1	1	0	AAA	domain
BRE1	PF08647.11	gi|297622149|ref|YP_003710286.1|	-	0.1	12.7	22.5	0.47	10.5	10.1	2.3	1	1	0	2	2	2	0	BRE1	E3	ubiquitin	ligase
DENN	PF02141.21	gi|297622149|ref|YP_003710286.1|	-	0.12	12.3	0.0	0.27	11.2	0.0	1.6	1	0	0	1	1	1	0	DENN	(AEX-3)	domain
Exonuc_VII_L	PF02601.15	gi|297622149|ref|YP_003710286.1|	-	0.12	11.9	8.5	0.18	11.4	8.5	1.3	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
PAS_8	PF13188.7	gi|297622149|ref|YP_003710286.1|	-	0.17	12.0	0.0	0.36	10.9	0.0	1.6	1	0	0	1	1	1	0	PAS	domain
bZIP_1	PF00170.21	gi|297622149|ref|YP_003710286.1|	-	0.17	12.0	16.3	0.3	11.2	5.9	2.5	2	0	0	2	2	2	0	bZIP	transcription	factor
PspA_IM30	PF04012.12	gi|297622149|ref|YP_003710286.1|	-	0.29	10.7	20.5	0.47	10.0	20.5	1.2	1	0	0	1	1	1	0	PspA/IM30	family
LUC7	PF03194.15	gi|297622149|ref|YP_003710286.1|	-	0.42	10.2	12.2	0.67	9.6	12.2	1.4	1	0	0	1	1	1	0	LUC7	N_terminus
Nup88	PF10168.9	gi|297622149|ref|YP_003710286.1|	-	0.46	8.2	15.9	0.66	7.7	15.9	1.2	1	0	0	1	1	1	0	Nuclear	pore	component
YkyA	PF10368.9	gi|297622149|ref|YP_003710286.1|	-	0.62	9.7	25.9	1	9.0	25.9	1.3	1	0	0	1	1	1	0	Putative	cell-wall	binding	lipoprotein
KELK	PF15796.5	gi|297622149|ref|YP_003710286.1|	-	0.65	10.5	21.9	0.25	11.8	17.4	2.5	1	1	1	2	2	2	0	KELK-motif	containing	domain	of	MRCK	Ser/Thr	protein	kinase
ATG16	PF08614.11	gi|297622149|ref|YP_003710286.1|	-	0.67	10.2	23.9	2.2	8.4	6.4	2.2	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
Laminin_II	PF06009.12	gi|297622149|ref|YP_003710286.1|	-	0.98	9.4	15.5	1.3	9.0	6.7	2.3	1	1	1	2	2	2	0	Laminin	Domain	II
KfrA_N	PF11740.8	gi|297622149|ref|YP_003710286.1|	-	1.4	9.6	11.5	0.1	13.3	2.2	2.3	1	1	1	2	2	2	0	Plasmid	replication	region	DNA-binding	N-term
SLATT_1	PF18181.1	gi|297622149|ref|YP_003710286.1|	-	2.1	8.3	6.7	0.29	11.1	0.2	2.4	2	1	1	3	3	3	0	SMODS	and	SLOG-associating	2TM	effector	domain	1
CLZ	PF16526.5	gi|297622149|ref|YP_003710286.1|	-	4.1	7.8	14.2	7.8	6.9	5.4	2.6	1	1	1	2	2	2	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
Cortex-I_coil	PF09304.10	gi|297622149|ref|YP_003710286.1|	-	5.1	7.4	19.5	0.33	11.2	9.1	2.4	1	1	1	2	2	2	0	Cortexillin	I,	coiled	coil
S_4TM	PF18159.1	gi|297622149|ref|YP_003710286.1|	-	5.7	6.2	10.7	0.76	9.0	4.0	2.4	1	1	0	2	2	2	0	SMODS-associating	4TM	effector	domain
BLOC1_2	PF10046.9	gi|297622149|ref|YP_003710286.1|	-	5.9	7.3	17.4	1.2	9.5	4.1	2.5	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF1664	PF07889.12	gi|297622149|ref|YP_003710286.1|	-	8.8	6.4	12.3	2.6	8.1	2.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
CoiA	PF06054.11	gi|297622150|ref|YP_003710287.1|	-	4.1e-19	69.0	1.5	5.4e-19	68.6	1.5	1.2	1	0	0	1	1	1	1	Competence	protein	CoiA-like	family
Sigma70_r3	PF04539.16	gi|297622151|ref|YP_003710288.1|	-	7.8e-25	86.8	3.7	9.8e-25	86.5	0.1	2.8	3	0	0	3	3	3	1	Sigma-70	region	3
Sigma70_r4	PF04545.16	gi|297622151|ref|YP_003710288.1|	-	8.8e-23	79.6	3.6	4.5e-18	64.5	0.9	3.1	2	0	0	2	2	2	2	Sigma-70,	region	4
Sigma70_r2	PF04542.14	gi|297622151|ref|YP_003710288.1|	-	6.5e-22	77.1	0.2	3.2e-21	74.8	0.2	2.3	3	0	0	3	3	3	1	Sigma-70	region	2
Sigma70_r1_1	PF03979.14	gi|297622151|ref|YP_003710288.1|	-	1.2e-16	60.5	6.4	1.2e-16	60.5	6.4	2.0	2	0	0	2	2	2	1	Sigma-70	factor,	region	1.1
Sigma70_r1_2	PF00140.20	gi|297622151|ref|YP_003710288.1|	-	3.4e-16	58.9	0.2	1.3e-15	57.1	0.2	2.1	1	0	0	1	1	1	1	Sigma-70	factor,	region	1.2
HTH_15	PF12324.8	gi|297622151|ref|YP_003710288.1|	-	0.021	14.8	0.0	23	5.0	0.0	3.6	3	0	0	3	3	3	0	Helix-turn-helix	domain	of	alkylmercury	lyase
Helicase_C_2	PF13307.6	gi|297622152|ref|YP_003710289.1|	-	6.9e-47	159.8	0.0	2.5e-46	158.0	0.0	1.9	2	0	0	2	2	2	1	Helicase	C-terminal	domain
ResIII	PF04851.15	gi|297622152|ref|YP_003710289.1|	-	7.1e-07	29.4	0.0	5e-06	26.6	0.0	2.3	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|297622152|ref|YP_003710289.1|	-	1.3e-06	28.3	1.2	0.0026	17.6	0.0	3.3	4	1	0	4	4	4	2	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|297622152|ref|YP_003710289.1|	-	3e-05	24.3	0.0	0.00036	20.9	0.0	2.7	3	1	0	3	3	3	1	Helicase	conserved	C-terminal	domain
DEAD_2	PF06733.15	gi|297622152|ref|YP_003710289.1|	-	0.00032	20.4	0.0	0.00064	19.4	0.0	1.5	1	0	0	1	1	1	1	DEAD_2
SecA_DEAD	PF07517.14	gi|297622152|ref|YP_003710289.1|	-	0.024	13.9	0.3	2.9	7.1	0.0	2.3	2	0	0	2	2	2	0	SecA	DEAD-like	domain
Peptidase_M13_N	PF05649.13	gi|297622153|ref|YP_003710290.1|	-	0.01	15.5	0.1	0.014	15.1	0.1	1.2	1	0	0	1	1	1	0	Peptidase	family	M13
T2SSF	PF00482.23	gi|297622153|ref|YP_003710290.1|	-	0.019	14.9	0.2	0.066	13.2	0.1	2.0	2	1	0	2	2	2	0	Type	II	secretion	system	(T2SS),	protein	F
GrpE	PF01025.19	gi|297622153|ref|YP_003710290.1|	-	0.062	13.0	4.7	0.12	12.0	4.7	1.5	1	0	0	1	1	1	0	GrpE
Csm2_III-A	PF03750.13	gi|297622153|ref|YP_003710290.1|	-	0.11	13.3	7.2	0.51	11.2	7.0	2.1	1	1	1	2	2	2	0	Csm2	Type	III-A
Glyco_hydro_77	PF02446.17	gi|297622156|ref|YP_003710293.1|	-	1.6e-120	403.1	0.0	2e-120	402.8	0.0	1.0	1	0	0	1	1	1	1	4-alpha-glucanotransferase
DUF3417	PF11897.8	gi|297622157|ref|YP_003710294.1|	-	0.1	13.0	0.0	0.11	12.9	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3417)
Transposase_mut	PF00872.18	gi|297622158|ref|YP_003710295.1|	-	8.5e-11	41.3	0.0	1e-10	41.1	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
DDE_Tnp_IS240	PF13610.6	gi|297622158|ref|YP_003710295.1|	-	0.018	15.3	0.0	0.021	15.0	0.0	1.1	1	0	0	1	1	1	0	DDE	domain
Transposase_mut	PF00872.18	gi|297622159|ref|YP_003710296.1|	-	5.2e-10	38.7	0.0	5.7e-10	38.6	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.9	gi|297622159|ref|YP_003710296.1|	-	0.0022	18.4	0.0	0.0029	18.0	0.0	1.2	1	0	0	1	1	1	1	MULE	transposase	domain
FixO	PF02433.15	gi|297622166|ref|YP_003710303.1|	-	9.3e-23	80.8	0.0	1.9e-22	79.8	0.0	1.5	1	0	0	1	1	1	1	Cytochrome	C	oxidase,	mono-heme	subunit/FixO
COX1	PF00115.20	gi|297622167|ref|YP_003710304.1|	-	6e-89	298.9	73.8	6e-89	298.9	73.8	1.3	1	1	1	2	2	2	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
DUF2625	PF10946.8	gi|297622167|ref|YP_003710304.1|	-	0.065	12.3	3.5	0.65	9.0	0.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF2625
Cytochrom_C	PF00034.21	gi|297622168|ref|YP_003710305.1|	-	3e-28	98.8	0.4	4.2e-05	24.6	0.0	8.7	8	1	0	8	8	8	6	Cytochrome	c
Cytochrome_CBB3	PF13442.6	gi|297622168|ref|YP_003710305.1|	-	2.1e-23	82.4	1.1	5e-07	29.9	0.0	7.4	7	1	0	7	7	7	4	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Cytochrome_C7	PF14522.6	gi|297622168|ref|YP_003710305.1|	-	1.3e-07	31.5	4.7	3.9	7.5	0.1	6.4	6	0	0	6	6	6	1	Cytochrome	c7	and	related	cytochrome	c
FixO	PF02433.15	gi|297622168|ref|YP_003710305.1|	-	0.00025	20.6	14.7	0.0035	16.8	0.1	6.5	7	1	0	7	7	7	2	Cytochrome	C	oxidase,	mono-heme	subunit/FixO
Cytochrom_c3_2	PF14537.6	gi|297622168|ref|YP_003710305.1|	-	0.00097	19.6	9.9	7.6	7.1	0.1	6.1	6	0	0	6	6	6	1	Cytochrome	c3
DUF3365	PF11845.8	gi|297622168|ref|YP_003710305.1|	-	0.00098	19.5	3.4	3.8	7.8	0.0	5.5	5	1	0	5	5	5	1	Protein	of	unknown	function	(DUF3365)
DHC	PF09626.10	gi|297622168|ref|YP_003710305.1|	-	0.047	14.6	5.6	3.1	8.7	0.0	5.7	6	0	0	6	6	6	0	Dihaem	cytochrome	c
DUF1924	PF09086.11	gi|297622168|ref|YP_003710305.1|	-	0.2	12.0	7.7	5.5	7.4	0.0	5.1	6	0	0	6	6	6	0	Domain	of	unknown	function	(DUF1924)
NusB	PF01029.18	gi|297622168|ref|YP_003710305.1|	-	0.33	11.2	5.7	6	7.1	2.1	3.2	2	1	0	2	2	2	0	NusB	family
Paired_CXXCH_1	PF09699.10	gi|297622168|ref|YP_003710305.1|	-	0.83	9.5	20.2	21	4.9	0.0	6.2	6	0	0	6	6	6	0	Doubled	CXXCH	motif	(Paired_CXXCH_1)
Cytochrome_B	PF00033.19	gi|297622169|ref|YP_003710306.1|	-	1.1e-38	132.9	11.3	1.1e-38	132.9	11.3	2.2	2	0	0	2	2	2	1	Cytochrome	b/b6/petB
Cytochrom_B_N_2	PF13631.6	gi|297622169|ref|YP_003710306.1|	-	6.6e-35	120.6	4.6	6.6e-35	120.6	4.6	2.1	2	1	0	2	2	2	1	Cytochrome	b(N-terminal)/b6/petB
DUF4405	PF14358.6	gi|297622169|ref|YP_003710306.1|	-	1.6e-06	28.6	2.1	1.6e-06	28.6	2.1	3.7	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF4405)
Ni_hydr_CYTB	PF01292.20	gi|297622169|ref|YP_003710306.1|	-	0.001	18.7	4.2	0.001	18.7	4.2	3.4	1	1	1	3	3	3	1	Prokaryotic	cytochrome	b561
Cytochrom_B_C	PF00032.17	gi|297622169|ref|YP_003710306.1|	-	0.0023	18.2	0.4	0.0023	18.2	0.4	3.6	2	1	1	3	3	3	1	Cytochrome	b(C-terminal)/b6/petD
dNK	PF01712.19	gi|297622169|ref|YP_003710306.1|	-	0.18	11.7	0.1	0.28	11.0	0.1	1.2	1	0	0	1	1	1	0	Deoxynucleoside	kinase
Rieske	PF00355.26	gi|297622170|ref|YP_003710307.1|	-	4.2e-11	42.6	0.0	5.7e-11	42.2	0.0	1.2	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
FixS	PF03597.15	gi|297622171|ref|YP_003710308.1|	-	3.2e-07	29.9	0.5	3.3e-07	29.9	0.5	1.0	1	0	0	1	1	1	1	Cytochrome	oxidase	maturation	protein	cbb3-type
FixQ	PF05545.11	gi|297622171|ref|YP_003710308.1|	-	0.0023	17.8	0.8	0.0026	17.7	0.8	1.1	1	0	0	1	1	1	1	Cbb3-type	cytochrome	oxidase	component	FixQ
CCSMST1	PF15013.6	gi|297622171|ref|YP_003710308.1|	-	0.1	12.8	1.3	0.12	12.6	1.3	1.3	1	1	0	1	1	1	0	CCSMST1	family
CrgA	PF06781.12	gi|297622171|ref|YP_003710308.1|	-	0.12	12.4	0.9	0.13	12.4	0.9	1.0	1	0	0	1	1	1	0	Cell	division	protein	CrgA
Pyr_redox_2	PF07992.14	gi|297622172|ref|YP_003710309.1|	-	1.7e-26	93.2	0.7	2.5e-26	92.6	0.7	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_20	PF14691.6	gi|297622172|ref|YP_003710309.1|	-	6.2e-13	48.5	19.5	4.3e-10	39.4	0.0	4.3	3	1	0	3	3	3	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4	PF00037.27	gi|297622172|ref|YP_003710309.1|	-	4.3e-10	39.0	25.1	6.5e-08	32.1	1.3	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Pyr_redox_3	PF13738.6	gi|297622172|ref|YP_003710309.1|	-	1.8e-08	34.0	0.0	6.1e-07	29.0	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_7	PF12838.7	gi|297622172|ref|YP_003710309.1|	-	5.8e-07	30.0	10.7	5.8e-07	30.0	10.7	4.0	4	1	0	4	4	4	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|297622172|ref|YP_003710309.1|	-	1e-05	25.6	7.8	0.00057	20.0	0.8	4.1	4	1	0	4	4	4	2	4Fe-4S	dicluster	domain
NAD_binding_8	PF13450.6	gi|297622172|ref|YP_003710309.1|	-	1.9e-05	24.8	0.2	6.4e-05	23.1	0.1	1.9	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.27	gi|297622172|ref|YP_003710309.1|	-	3.2e-05	24.4	3.1	0.027	15.0	0.4	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_16	PF13484.6	gi|297622172|ref|YP_003710309.1|	-	0.00017	22.5	8.4	0.0024	18.8	1.2	4.2	5	0	0	5	5	4	2	4Fe-4S	double	cluster	binding	domain
AlaDh_PNT_C	PF01262.21	gi|297622172|ref|YP_003710309.1|	-	0.00022	20.6	0.7	0.053	12.8	0.0	2.3	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Fer4_6	PF12837.7	gi|297622172|ref|YP_003710309.1|	-	0.00027	20.9	2.2	0.00027	20.9	2.2	4.1	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|297622172|ref|YP_003710309.1|	-	0.00059	19.9	26.0	0.0013	18.9	0.4	3.9	3	2	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|297622172|ref|YP_003710309.1|	-	0.0016	18.4	1.2	0.0016	18.4	1.2	4.5	4	1	1	5	5	4	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|297622172|ref|YP_003710309.1|	-	0.0027	17.8	0.6	0.0027	17.8	0.6	3.7	4	1	0	4	4	3	1	4Fe-4S	dicluster	domain
NAD_binding_7	PF13241.6	gi|297622172|ref|YP_003710309.1|	-	0.0035	17.8	0.1	0.033	14.6	0.0	2.2	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Fer4_8	PF13183.6	gi|297622172|ref|YP_003710309.1|	-	0.013	15.9	12.4	0.013	15.9	12.4	3.5	3	2	1	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|297622172|ref|YP_003710309.1|	-	0.02	15.4	14.9	0.02	15.4	14.9	3.9	3	2	1	4	4	2	0	4Fe-4S	dicluster	domain
F420_oxidored	PF03807.17	gi|297622172|ref|YP_003710309.1|	-	0.027	15.0	0.1	0.14	12.7	0.1	2.3	2	1	0	2	2	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
DAO	PF01266.24	gi|297622172|ref|YP_003710309.1|	-	0.11	12.0	1.0	0.4	10.2	0.9	2.2	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.7	gi|297622172|ref|YP_003710309.1|	-	0.13	11.5	0.6	0.48	9.7	0.1	2.0	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
ADD_DNMT3	PF17980.1	gi|297622172|ref|YP_003710309.1|	-	1.4	9.0	7.2	0.85	9.7	0.5	2.9	2	0	0	2	2	2	0	Cysteine	rich	ADD	domain	in	DNMT3
Fer4_18	PF13746.6	gi|297622172|ref|YP_003710309.1|	-	2.2	8.5	16.9	1.3	9.3	0.1	3.4	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|297622172|ref|YP_003710309.1|	-	2.5	9.0	14.4	2e+03	-0.3	14.4	3.0	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Acylphosphatase	PF00708.18	gi|297622173|ref|YP_003710310.1|	-	3.4e-23	81.8	0.0	3.7e-23	81.7	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
VWA	PF00092.28	gi|297622173|ref|YP_003710310.1|	-	0.15	12.3	0.0	0.17	12.1	0.0	1.1	1	0	0	1	1	1	0	von	Willebrand	factor	type	A	domain
Dus	PF01207.17	gi|297622174|ref|YP_003710311.1|	-	6.9e-85	284.9	0.0	8.4e-85	284.6	0.0	1.0	1	0	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
PEP_mutase	PF13714.6	gi|297622174|ref|YP_003710311.1|	-	1.6e-06	27.8	0.2	2.4e-06	27.2	0.2	1.3	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
DeoC	PF01791.9	gi|297622174|ref|YP_003710311.1|	-	0.00073	19.2	0.4	0.02	14.5	0.1	2.2	1	1	1	2	2	2	2	DeoC/LacD	family	aldolase
PGBA_N	PF15436.6	gi|297622174|ref|YP_003710311.1|	-	0.15	11.7	0.0	0.25	10.9	0.0	1.2	1	0	0	1	1	1	0	Plasminogen-binding	protein	pgbA	N-terminal
SOR_SNZ	PF01680.17	gi|297622174|ref|YP_003710311.1|	-	0.46	10.2	3.6	0.96	9.2	0.1	2.7	1	1	2	3	3	3	0	SOR/SNZ	family
YGGT	PF02325.17	gi|297622175|ref|YP_003710312.1|	-	2.6e-19	69.4	3.6	3.4e-19	69.0	3.6	1.2	1	0	0	1	1	1	1	YGGT	family
PilM_2	PF11104.8	gi|297622176|ref|YP_003710313.1|	-	2.5e-09	36.6	0.0	4e-09	36.0	0.0	1.4	1	0	0	1	1	1	1	Type	IV	pilus	assembly	protein	PilM;
TssO	PF17561.2	gi|297622176|ref|YP_003710313.1|	-	0.027	14.6	0.3	0.071	13.2	0.3	1.6	1	0	0	1	1	1	0	Type	VI	secretion	system,	TssO
Herpes_U59	PF04529.12	gi|297622176|ref|YP_003710313.1|	-	0.19	10.8	0.0	0.32	10.0	0.0	1.3	1	0	0	1	1	1	0	Herpesvirus	U59	protein
MORN_2	PF07661.13	gi|297622178|ref|YP_003710315.1|	-	9.4e-16	56.1	22.8	0.085	13.1	0.0	11.3	11	2	1	12	12	12	6	MORN	repeat	variant
Dynactin_p62	PF05502.13	gi|297622178|ref|YP_003710315.1|	-	0.047	12.5	0.5	0.072	11.9	0.5	1.2	1	0	0	1	1	1	0	Dynactin	p62	family
TetR_C_8	PF14278.6	gi|297622178|ref|YP_003710315.1|	-	0.12	12.5	0.0	0.27	11.4	0.0	1.6	1	0	0	1	1	1	0	Transcriptional	regulator	C-terminal	region
IlvC	PF01450.19	gi|297622178|ref|YP_003710315.1|	-	0.12	12.6	0.9	14	6.0	0.2	2.3	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
5-FTHF_cyc-lig	PF01812.20	gi|297622179|ref|YP_003710316.1|	-	3.1e-26	92.4	0.0	3.6e-26	92.2	0.0	1.0	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
ComP_DUS	PF16732.5	gi|297622179|ref|YP_003710316.1|	-	0.12	13.3	0.0	0.18	12.7	0.0	1.3	1	0	0	1	1	1	0	Type	IV	minor	pilin	ComP,	DNA	uptake	sequence	receptor
RecA	PF00154.21	gi|297622180|ref|YP_003710317.1|	-	4.6e-133	442.6	1.4	5.7e-133	442.3	1.4	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Rad51	PF08423.11	gi|297622180|ref|YP_003710317.1|	-	3.7e-13	49.3	0.2	2.4e-12	46.7	0.2	1.9	1	1	0	1	1	1	1	Rad51
ATPase	PF06745.13	gi|297622180|ref|YP_003710317.1|	-	1.2e-08	34.6	1.0	1.6e-07	30.9	1.0	2.8	1	1	0	1	1	1	1	KaiC
CobU	PF02283.16	gi|297622180|ref|YP_003710317.1|	-	5.2e-06	26.1	0.0	1e-05	25.2	0.0	1.5	1	0	0	1	1	1	1	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
ATPase_2	PF01637.18	gi|297622180|ref|YP_003710317.1|	-	9.2e-06	25.7	0.0	2e-05	24.6	0.0	1.6	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_24	PF13479.6	gi|297622180|ref|YP_003710317.1|	-	0.00013	21.7	0.0	0.00025	20.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.6	gi|297622180|ref|YP_003710317.1|	-	0.00014	21.5	0.3	0.067	12.8	0.1	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.6	gi|297622180|ref|YP_003710317.1|	-	0.001	19.5	0.1	0.0023	18.3	0.0	1.6	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.29	gi|297622180|ref|YP_003710317.1|	-	0.0018	18.7	0.0	0.0047	17.3	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.27	gi|297622180|ref|YP_003710317.1|	-	0.0038	17.7	0.0	0.0086	16.6	0.0	1.6	1	1	0	1	1	1	1	ABC	transporter
AAA_35	PF14516.6	gi|297622180|ref|YP_003710317.1|	-	0.025	13.4	0.0	0.048	12.5	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
AAA_22	PF13401.6	gi|297622180|ref|YP_003710317.1|	-	0.053	13.8	0.0	0.13	12.6	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
PNPase	PF03726.14	gi|297622180|ref|YP_003710317.1|	-	0.13	12.7	1.5	2.8	8.5	0.0	3.0	3	0	0	3	3	3	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
AAA_14	PF13173.6	gi|297622180|ref|YP_003710317.1|	-	0.14	12.2	0.0	0.42	10.7	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
#
# Program:         hmmscan
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SCAN
# Query file:      /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225.faa
# Target file:     /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225.faa 
# Current dir:     /oak/stanford/groups/akundaje/marinovg/genomes
# Date:            Sun Mar 24 04:24:31 2019
# [ok]