# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- URO-D PF01208.17 AHX10978.1 - 4.4e-79 266.1 0.0 5.4e-79 265.8 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) NadA PF02445.16 AHX10979.1 - 1.6e-36 126.0 0.0 1.8e-36 125.9 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein NadA PF02445.16 AHX10980.1 - 3.5e-39 134.8 0.0 3.8e-39 134.6 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein Mob_synth_C PF06463.13 AHX10980.1 - 0.049 13.6 0.1 0.082 12.8 0.1 1.3 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C CTP_transf_like PF01467.26 AHX10981.1 - 7e-17 62.0 0.0 8.2e-17 61.7 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like HMA PF00403.26 AHX10981.1 - 0.078 13.4 0.1 2.3 8.7 0.0 2.3 2 0 0 2 2 2 0 Heavy-metal-associated domain RGS PF00615.19 AHX10981.1 - 0.1 12.9 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Regulator of G protein signaling domain FKBP_C PF00254.28 AHX10982.1 - 0.04 14.2 0.5 4.3 7.7 0.1 2.4 2 0 0 2 2 2 0 FKBP-type peptidyl-prolyl cis-trans isomerase ParBc PF02195.18 AHX10983.1 - 4e-23 81.5 1.1 5.6e-23 81.0 0.3 1.7 2 0 0 2 2 2 1 ParB-like nuclease domain HTH_ParB PF17762.1 AHX10983.1 - 1.1e-11 44.3 2.3 1.6e-11 43.9 0.4 2.2 2 0 0 2 2 2 1 HTH domain found in ParB protein KorB PF08535.10 AHX10983.1 - 0.00036 20.5 0.1 0.015 15.3 0.0 2.4 2 0 0 2 2 2 1 KorB domain HTH_19 PF12844.7 AHX10983.1 - 0.014 15.4 0.3 0.17 11.9 0.0 2.9 2 1 0 2 2 2 0 Helix-turn-helix domain DUF561 PF04481.12 AHX10983.1 - 0.026 13.7 2.1 0.027 13.7 0.6 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF561) TrmB PF01978.19 AHX10983.1 - 0.052 13.4 0.1 0.17 11.8 0.1 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HATPase_c PF02518.26 AHX10985.1 - 9.3e-27 93.8 0.3 1.8e-26 92.8 0.3 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AHX10985.1 - 4e-18 65.2 0.0 7.9e-18 64.3 0.0 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 AHX10985.1 - 3.4e-06 26.9 0.5 7.3e-06 25.9 0.1 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 AHX10985.1 - 0.014 15.4 0.0 0.023 14.7 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Peptidase_M56 PF05569.11 AHX10985.1 - 0.016 14.4 0.2 0.026 13.7 0.2 1.3 1 0 0 1 1 1 0 BlaR1 peptidase M56 GRIP PF01465.20 AHX10985.1 - 0.039 13.9 0.0 1.5 8.8 0.0 2.4 2 0 0 2 2 2 0 GRIP domain DAO PF01266.24 AHX10986.1 - 5.7e-08 32.7 0.1 1.6e-07 31.3 0.0 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase SBP_bac_6 PF13343.6 AHX10987.1 - 1.4e-17 63.9 0.2 1.9e-17 63.5 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AHX10987.1 - 2.3e-16 60.5 0.0 3e-16 60.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AHX10987.1 - 3.7e-16 59.6 0.0 7.3e-16 58.6 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AHX10987.1 - 2e-13 51.0 0.0 4.3e-13 49.9 0.0 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein RuvX PF03652.15 AHX10988.1 - 4e-22 79.0 0.0 4.7e-22 78.8 0.0 1.0 1 0 0 1 1 1 1 Holliday junction resolvase CDP-OH_P_transf PF01066.21 AHX10990.1 - 3.2e-16 59.9 0.3 3.2e-16 59.9 0.3 2.6 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Oxidored_q3 PF00499.20 AHX10991.1 - 2.5e-28 98.6 16.7 2.5e-28 98.6 16.7 1.5 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ceramidase PF05875.12 AHX10991.1 - 0.058 12.8 11.7 0.11 11.9 11.7 1.5 1 1 0 1 1 1 0 Ceramidase ATP-synt_C PF00137.21 AHX10991.1 - 0.16 12.3 0.3 0.16 12.3 0.3 3.1 2 1 1 3 3 3 0 ATP synthase subunit C HisKA_7TM PF16927.5 AHX10991.1 - 0.48 10.4 17.4 0.58 10.2 17.4 1.1 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase DUF2244 PF10003.9 AHX10991.1 - 0.73 9.5 0.0 0.73 9.5 0.0 2.5 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) Oxidored_q2 PF00420.24 AHX10992.1 - 5e-15 55.0 11.3 7.8e-15 54.4 11.3 1.3 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NAD4L PF06235.11 AHX10992.1 - 0.042 13.8 9.5 0.053 13.5 9.5 1.2 1 0 0 1 1 1 0 NADH dehydrogenase subunit 4L (NAD4L) 2-ph_phosp PF04029.14 AHX10992.1 - 0.1 11.8 1.7 0.12 11.5 1.7 1.1 1 0 0 1 1 1 0 2-phosphosulpholactate phosphatase Proton_antipo_M PF00361.20 AHX10993.1 - 8.6e-90 300.9 21.0 8.6e-90 300.9 21.0 2.7 2 1 1 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 AHX10993.1 - 3.8e-20 71.7 3.9 2.5e-19 69.1 3.9 2.6 1 0 0 1 1 1 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Rad21_Rec8_N PF04825.13 AHX10993.1 - 0.031 14.4 0.0 0.11 12.7 0.0 1.8 2 0 0 2 2 2 0 N terminus of Rad21 / Rec8 like protein Ank_2 PF12796.7 AHX10994.1 - 1.7e-18 67.0 8.6 2.2e-09 37.8 0.5 2.9 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 AHX10994.1 - 6.5e-18 64.8 1.0 0.0014 19.2 0.0 4.1 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 AHX10994.1 - 3.9e-15 54.4 0.7 0.00024 21.3 0.0 4.3 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 AHX10994.1 - 4.7e-15 55.5 1.6 0.00032 20.9 0.0 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 AHX10994.1 - 3.6e-14 52.5 3.1 0.0016 18.8 0.2 4.5 5 0 0 5 5 5 3 Ankyrin repeat Ribosomal_S11 PF00411.19 AHX10994.1 - 0.098 13.1 0.1 0.32 11.4 0.0 1.8 1 1 1 2 2 2 0 Ribosomal protein S11 TGT PF01702.18 AHX10995.1 - 1.1e-100 337.2 0.1 3.9e-100 335.4 0.1 1.7 1 1 0 1 1 1 1 Queuine tRNA-ribosyltransferase L27 PF02828.16 AHX10996.1 - 0.024 14.4 0.1 0.27 11.0 0.0 1.9 1 1 1 2 2 2 0 L27 domain Pro_CA PF00484.19 AHX10997.1 - 2.3e-46 157.9 0.0 2.7e-46 157.7 0.0 1.0 1 0 0 1 1 1 1 Carbonic anhydrase DUF1290 PF06947.12 AHX10997.1 - 0.011 15.8 0.1 0.026 14.6 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1290) HSP70 PF00012.20 AHX10998.1 - 1.9e-260 865.2 14.3 2.3e-260 864.9 14.3 1.1 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 AHX10998.1 - 5.5e-19 68.2 1.6 1.7e-14 53.4 0.1 2.7 2 1 0 2 2 2 2 MreB/Mbl protein DMRL_synthase PF00885.19 AHX10998.1 - 0.00097 19.0 0.2 0.0036 17.1 0.1 2.0 2 0 0 2 2 2 1 6,7-dimethyl-8-ribityllumazine synthase FGGY_C PF02782.16 AHX10998.1 - 0.014 15.1 0.0 0.032 14.0 0.0 1.6 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain DUF1090 PF06476.12 AHX10998.1 - 0.02 15.0 7.0 0.075 13.2 7.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) XRN_N PF03159.18 AHX10998.1 - 3.8 6.9 6.4 22 4.3 0.0 2.3 1 1 1 2 2 2 0 XRN 5'-3' exonuclease N-terminus PseudoU_synth_1 PF01416.20 AHX10999.1 - 2.1e-37 127.9 0.0 9.1e-25 87.2 0.0 2.1 2 0 0 2 2 2 2 tRNA pseudouridine synthase Ank_2 PF12796.7 AHX11001.1 - 1.8e-34 118.2 3.8 6.1e-07 29.9 0.0 9.2 4 2 7 11 11 11 7 Ankyrin repeats (3 copies) Ank_4 PF13637.6 AHX11001.1 - 1.8e-34 117.6 9.7 9.7e-09 35.6 0.0 10.2 5 3 5 10 10 10 7 Ankyrin repeats (many copies) Ank_3 PF13606.6 AHX11001.1 - 6.1e-19 66.1 21.2 0.72 10.6 0.0 14.0 15 0 0 15 15 15 6 Ankyrin repeat Ank_5 PF13857.6 AHX11001.1 - 8.7e-16 57.8 12.4 0.0042 17.4 0.1 9.0 8 2 1 9 9 9 4 Ankyrin repeats (many copies) Ank PF00023.30 AHX11001.1 - 3.2e-15 55.8 21.6 0.88 10.1 0.1 11.9 10 2 0 10 10 10 4 Ankyrin repeat DUF3087 PF11286.8 AHX11001.1 - 0.083 12.3 0.5 0.17 11.4 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) DUF2975 PF11188.8 AHX11001.1 - 0.65 9.9 3.4 1.6 8.6 3.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) Phage_AlpA PF05930.12 AHX11002.1 - 0.12 12.2 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) Vut_1 PF02592.15 AHX11005.1 - 2.3e-29 102.6 17.0 2.3e-29 102.6 17.0 1.7 2 0 0 2 2 2 1 Putative vitamin uptake transporter AIRS_C PF02769.22 AHX11007.1 - 3.8e-29 101.8 0.0 5.3e-29 101.4 0.0 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 AHX11007.1 - 2.4e-15 56.9 0.2 4.5e-15 56.1 0.2 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Oxidored_q2 PF00420.24 AHX11008.1 - 2e-19 69.2 7.3 2.1e-19 69.1 7.3 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2108 PF09881.9 AHX11008.1 - 0.0064 16.4 1.7 0.0064 16.4 1.7 2.1 1 1 1 2 2 2 2 Predicted membrane protein (DUF2108) DUF1430 PF07242.11 AHX11008.1 - 0.35 11.1 4.7 0.13 12.6 1.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1430) SPW PF03779.14 AHX11008.1 - 2.4 7.8 10.4 0.45 10.1 3.2 2.3 2 0 0 2 2 2 0 SPW repeat MnhB PF04039.13 AHX11009.1 - 1.6e-23 83.3 14.8 1.9e-23 83.1 14.8 1.0 1 0 0 1 1 1 1 Domain related to MnhB subunit of Na+/H+ antiporter DUF4040 PF13244.6 AHX11010.1 - 9e-13 48.2 12.0 9e-13 48.2 12.0 2.3 3 0 0 3 3 3 1 Domain of unknown function (DUF4040) Acyl_transf_3 PF01757.22 AHX11010.1 - 0.0021 17.2 4.6 0.003 16.7 4.6 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF2298 PF10060.9 AHX11010.1 - 1.6 7.3 9.5 0.11 11.2 2.3 2.3 1 1 0 1 1 1 0 Uncharacterized membrane protein (DUF2298) PhaG_MnhG_YufB PF03334.14 AHX11011.1 - 4.4e-21 74.9 6.0 4.8e-21 74.8 6.0 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter subunit Methyltrans_RNA PF04452.14 AHX11012.1 - 1.2e-42 145.8 0.0 1.4e-42 145.6 0.0 1.0 1 0 0 1 1 1 1 RNA methyltransferase DUF4468 PF14730.6 AHX11012.1 - 0.11 12.9 0.1 0.46 10.8 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4468) with TBP-like fold HTH_37 PF13744.6 AHX11013.1 - 1.2e-14 54.0 0.0 1.4e-14 53.8 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 AHX11013.1 - 0.0026 17.7 0.1 0.0039 17.2 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain RNA_pol_Rpb6 PF01192.22 AHX11014.1 - 2.3e-06 27.4 0.0 4e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb6 FAD_syn PF06574.12 AHX11015.1 - 3.4e-31 108.3 0.0 5.1e-31 107.7 0.0 1.3 1 0 0 1 1 1 1 FAD synthetase Flavokinase PF01687.17 AHX11015.1 - 6.4e-29 100.5 0.0 1.1e-28 99.8 0.0 1.3 1 0 0 1 1 1 1 Riboflavin kinase CTP_transf_like PF01467.26 AHX11015.1 - 0.03 14.5 0.4 0.083 13.1 0.4 1.9 1 1 0 1 1 1 0 Cytidylyltransferase-like Fis1_TPR_C PF14853.6 AHX11015.1 - 0.18 11.9 0.1 1.1 9.3 0.0 2.2 2 1 1 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat HMMR_N PF15905.5 AHX11016.1 - 0.0033 16.9 1.3 0.0055 16.2 1.3 1.2 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal DUF848 PF05852.11 AHX11016.1 - 0.0065 16.6 1.9 0.56 10.3 0.8 2.2 2 0 0 2 2 2 1 Gammaherpesvirus protein of unknown function (DUF848) Apolipoprotein PF01442.18 AHX11016.1 - 0.018 14.9 0.2 0.035 14.0 0.2 1.4 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF3216 PF11505.8 AHX11016.1 - 0.022 15.0 1.7 1.1 9.5 0.2 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3216) DUF3898 PF13037.6 AHX11016.1 - 0.036 14.2 0.0 0.078 13.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3898) BshC PF10079.9 AHX11016.1 - 0.053 12.3 0.8 0.074 11.8 0.8 1.2 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC mRNA_triPase PF02940.15 AHX11016.1 - 0.064 13.0 0.7 0.099 12.3 0.7 1.2 1 0 0 1 1 1 0 mRNA capping enzyme, beta chain Fib_alpha PF08702.10 AHX11016.1 - 0.11 12.7 0.8 0.3 11.3 0.3 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF2884 PF11101.8 AHX11016.1 - 0.12 11.8 3.7 0.42 10.1 0.8 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2884) Lectin_N PF03954.14 AHX11016.1 - 0.17 11.7 3.2 1.9 8.2 1.0 2.9 2 1 0 2 2 2 0 Hepatic lectin, N-terminal domain Spore_III_AB PF09548.10 AHX11016.1 - 0.19 11.8 0.1 0.6 10.2 0.1 1.7 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) ApoLp-III PF07464.11 AHX11016.1 - 0.29 11.2 5.2 1.1 9.3 0.6 2.7 2 1 1 3 3 3 0 Apolipophorin-III precursor (apoLp-III) DUF4446 PF14584.6 AHX11016.1 - 0.35 10.9 2.5 4.6 7.2 0.8 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) ABC_tran PF00005.27 AHX11017.1 - 4.6e-31 108.2 0.0 7e-31 107.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter Zeta_toxin PF06414.12 AHX11017.1 - 0.016 14.5 0.1 0.027 13.7 0.1 1.2 1 0 0 1 1 1 0 Zeta toxin PRK PF00485.18 AHX11017.1 - 0.038 13.7 0.0 0.06 13.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family ABC_ATPase PF09818.9 AHX11017.1 - 0.39 9.5 1.7 17 4.1 0.9 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class adh_short_C2 PF13561.6 AHX11020.1 - 1.1e-79 267.3 0.0 1.2e-79 267.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AHX11020.1 - 4.9e-17 62.0 0.0 6.5e-17 61.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Enoyl_reductase PF12241.8 AHX11020.1 - 0.018 14.4 0.1 2.5 7.4 0.0 2.1 2 0 0 2 2 2 0 Trans-2-enoyl-CoA reductase catalytic region DUF5625 PF18539.1 AHX11020.1 - 0.064 13.5 0.0 0.094 13.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5625) ThiS PF02597.20 AHX11021.1 - 1.7e-10 41.4 0.0 1.9e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 AHX11021.1 - 0.00098 19.1 0.0 0.0049 16.9 0.0 1.9 2 0 0 2 2 2 1 ThiS-like ubiquitin B3 PF02362.21 AHX11021.1 - 0.12 12.3 0.1 11 5.9 0.0 2.1 1 1 1 2 2 2 0 B3 DNA binding domain MazE_antitoxin PF04014.18 AHX11021.1 - 0.13 12.2 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin Hexapep PF00132.24 AHX11022.1 - 6.4e-15 54.2 4.8 2.7e-06 26.9 0.4 4.0 2 1 1 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AHX11022.1 - 8.2e-05 22.3 5.3 0.014 15.1 0.0 3.7 3 1 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 AHX11022.1 - 0.13 11.2 0.3 0.98 8.3 0.0 1.9 1 1 0 2 2 2 0 L-fucokinase Sdh_cyt PF01127.22 AHX11023.1 - 7.6e-21 74.4 7.6 9.3e-21 74.1 7.6 1.1 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Sdh_cyt PF01127.22 AHX11024.1 - 1.1e-07 31.9 6.4 1.5e-07 31.5 6.3 1.3 1 1 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Yip1 PF04893.17 AHX11024.1 - 0.00012 21.8 2.3 0.00012 21.8 2.3 1.7 1 1 0 1 1 1 1 Yip1 domain CybS PF05328.12 AHX11024.1 - 0.0018 18.0 7.4 0.0072 16.0 7.4 1.8 1 1 0 1 1 1 1 CybS, succinate dehydrogenase cytochrome B small subunit zn-ribbon_14 PF16503.5 AHX11024.1 - 0.03 13.8 0.1 0.046 13.2 0.1 1.2 1 0 0 1 1 1 0 Zinc-ribbon DUF2721 PF11026.8 AHX11024.1 - 2.1 8.2 12.9 0.064 13.1 4.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) DALR_1 PF05746.15 AHX11025.1 - 1.5e-22 80.0 0.0 3.1e-22 79.0 0.0 1.6 1 0 0 1 1 1 1 DALR anticodon binding domain tRNA-synt_1d PF00750.19 AHX11025.1 - 6.4e-14 51.7 0.1 1.5e-13 50.4 0.1 1.5 1 1 0 1 1 1 1 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 AHX11025.1 - 4.8e-12 46.3 0.0 1.2e-11 45.0 0.0 1.7 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1g PF09334.11 AHX11025.1 - 8.8e-06 24.7 0.0 0.88 8.2 0.0 3.4 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 AHX11025.1 - 3.9e-05 23.2 0.0 0.26 10.6 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 AHX11025.1 - 0.0055 15.7 0.0 0.086 11.7 0.0 2.6 3 0 0 3 3 3 1 tRNA synthetases class I (K) Bax1-I PF01027.20 AHX11026.1 - 4.4e-51 173.7 36.3 4.9e-51 173.5 36.3 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF1843 PF08898.10 AHX11027.1 - 4.6e-16 59.1 6.7 18 5.9 0.0 10.2 1 1 15 16 16 16 16 Domain of unknown function (DUF1843) Molybdopterin PF00384.22 AHX11029.1 - 4.9e-49 167.5 0.0 6.6e-24 84.6 0.0 2.7 2 1 1 3 3 3 2 Molybdopterin oxidoreductase Fer2_4 PF13510.6 AHX11029.1 - 9.3e-20 70.5 0.1 2.2e-19 69.2 0.1 1.7 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NADH-G_4Fe-4S_3 PF10588.9 AHX11029.1 - 8.7e-17 60.4 0.1 8.7e-17 60.4 0.1 2.0 2 0 0 2 2 2 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NADH_dhqG_C PF09326.11 AHX11029.1 - 3.8e-10 40.3 0.8 7.3e-10 39.4 0.8 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase subunit G, C-terminal Fer2 PF00111.27 AHX11029.1 - 6.5e-08 32.4 2.1 1.4e-07 31.4 0.3 2.4 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4 PF00037.27 AHX11029.1 - 0.098 12.5 1.3 4.1 7.4 0.4 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain NADHdh PF00146.21 AHX11030.1 - 1.1e-117 392.6 24.3 1.3e-117 392.4 24.3 1.0 1 0 0 1 1 1 1 NADH dehydrogenase BON PF04972.17 AHX11031.1 - 7.1e-25 87.1 3.1 2e-12 47.2 0.1 2.1 2 0 0 2 2 2 2 BON domain Phage_sheath_1N PF17481.2 AHX11031.1 - 0.017 15.6 1.2 0.026 15.0 1.2 1.5 1 1 0 1 1 1 0 Phage tail sheath protein beta-sandwich domain Lyase_1 PF00206.20 AHX11032.1 - 3.9e-105 351.7 0.0 4.9e-105 351.4 0.0 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 AHX11032.1 - 7.3e-23 80.7 0.2 1.6e-22 79.7 0.2 1.6 1 0 0 1 1 1 1 Fumarase C C-terminus AA_kinase PF00696.28 AHX11033.1 - 6.4e-39 134.0 0.4 8.5e-39 133.6 0.4 1.2 1 0 0 1 1 1 1 Amino acid kinase family RNase_PH PF01138.21 AHX11034.1 - 6.5e-39 133.5 0.4 1.5e-19 70.8 0.0 2.9 3 0 0 3 3 3 2 3' exoribonuclease family, domain 1 S1 PF00575.23 AHX11034.1 - 4.8e-13 49.2 1.0 4.8e-13 49.2 1.0 2.1 2 0 0 2 2 2 1 S1 RNA binding domain PNPase PF03726.14 AHX11034.1 - 9.9e-12 45.2 0.6 3e-11 43.7 0.6 1.9 1 0 0 1 1 1 1 Polyribonucleotide nucleotidyltransferase, RNA binding domain RNase_PH_C PF03725.15 AHX11034.1 - 1.6e-09 37.7 3.4 7.8e-06 25.8 0.4 2.8 2 0 0 2 2 2 2 3' exoribonuclease family, domain 2 KH_1 PF00013.29 AHX11034.1 - 7e-05 22.6 0.2 0.00019 21.2 0.2 1.8 1 0 0 1 1 1 1 KH domain Ribosomal_S15 PF00312.22 AHX11035.1 - 1.8e-30 105.0 1.2 2e-30 104.8 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S15 Lyase_1 PF00206.20 AHX11037.1 - 1e-48 166.4 0.0 1.4e-48 165.9 0.0 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 AHX11037.1 - 1.5e-23 83.1 0.0 3.6e-23 81.9 0.0 1.7 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.11 AHX11037.1 - 0.028 14.5 0.1 0.068 13.3 0.1 1.6 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal Ribosomal_L9_C PF03948.14 AHX11038.1 - 5e-20 71.8 0.1 8.4e-20 71.0 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L9, C-terminal domain Ribosomal_L9_N PF01281.19 AHX11038.1 - 1.7e-18 65.9 0.4 4.1e-18 64.7 0.4 1.7 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain Ribosomal_S18 PF01084.20 AHX11039.1 - 2.7e-15 56.3 0.1 3.3e-15 56.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S18 Ribosomal_S6 PF01250.17 AHX11040.1 - 1.1e-15 57.6 0.0 1.3e-15 57.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S6 PBP_like_2 PF12849.7 AHX11042.1 - 8e-20 71.7 0.0 1.1e-19 71.2 0.0 1.1 1 0 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 AHX11042.1 - 0.024 13.8 0.0 0.04 13.0 0.0 1.4 1 1 0 1 1 1 0 PBP superfamily domain MFS_1 PF07690.16 AHX11043.1 - 1.1e-40 139.7 43.4 1.1e-40 139.7 43.4 1.8 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 AHX11043.1 - 3.8e-08 32.6 18.1 3.8e-08 32.6 18.1 3.5 1 1 0 2 2 2 1 Sugar (and other) transporter MFS_3 PF05977.13 AHX11043.1 - 0.00057 18.4 23.2 0.00081 17.9 23.2 1.2 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_4 PF06779.14 AHX11043.1 - 0.00073 18.9 25.8 0.057 12.7 15.3 2.3 1 1 1 2 2 2 2 Uncharacterised MFS-type transporter YbfB TRI12 PF06609.13 AHX11043.1 - 0.0022 16.5 12.0 0.0025 16.3 11.5 1.3 1 1 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) OATP PF03137.20 AHX11043.1 - 0.27 9.5 15.1 0.35 9.1 5.0 3.0 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family EamA PF00892.20 AHX11044.1 - 3.2e-14 53.3 33.2 5.4e-11 42.8 6.8 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF2070 PF09843.9 AHX11044.1 - 0.63 8.3 31.6 0.52 8.6 20.1 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) SURF1 PF02104.15 AHX11046.1 - 2.7e-06 27.7 0.0 3.1e-06 27.5 0.0 1.0 1 0 0 1 1 1 1 SURF1 family ATP-synt_ab PF00006.25 AHX11047.1 - 6.9e-26 91.2 0.0 1.1e-25 90.5 0.0 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain Rho_RNA_bind PF07497.12 AHX11047.1 - 5.1e-24 83.9 0.1 1.2e-23 82.7 0.0 1.7 2 0 0 2 2 2 1 Rho termination factor, RNA-binding domain Rho_N PF07498.12 AHX11047.1 - 0.00032 20.6 2.6 0.00035 20.4 0.6 2.2 2 0 0 2 2 2 1 Rho termination factor, N-terminal domain AAA_25 PF13481.6 AHX11047.1 - 0.0018 17.9 0.1 0.0099 15.5 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA PF00004.29 AHX11047.1 - 0.0044 17.4 0.0 0.029 14.8 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 AHX11047.1 - 0.029 14.3 0.0 0.064 13.2 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_22 PF13401.6 AHX11047.1 - 0.078 13.2 0.7 0.32 11.3 0.0 2.3 3 0 0 3 3 3 0 AAA domain Phage_holin_3_6 PF07332.11 AHX11049.1 - 3.4 7.8 6.7 34 4.5 0.0 2.2 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF202 PF02656.15 AHX11049.1 - 8.9 6.8 5.8 12 6.4 0.0 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF202) DUF2637 PF10935.8 AHX11050.1 - 0.018 14.9 0.7 0.018 14.9 0.7 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2637) DUF2721 PF11026.8 AHX11050.1 - 0.3 11.0 9.3 0.24 11.3 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) DUF4131 PF13567.6 AHX11050.1 - 2.4 7.8 7.5 8.6 6.0 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) ApoL PF05461.11 AHX11052.1 - 0.056 12.8 0.2 0.056 12.8 0.2 1.1 1 0 0 1 1 1 0 Apolipoprotein L DUF3995 PF13160.6 AHX11053.1 - 0.003 17.9 10.6 0.3 11.5 1.4 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF3995) DUF4386 PF14329.6 AHX11053.1 - 0.047 13.6 3.3 0.071 13.0 3.3 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4386) TrbC PF04956.13 AHX11053.1 - 0.074 13.3 0.2 0.074 13.3 0.2 2.2 2 1 0 2 2 2 0 TrbC/VIRB2 family DUF4131 PF13567.6 AHX11053.1 - 3.8 7.2 5.8 27 4.4 1.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) Yip1 PF04893.17 AHX11054.1 - 0.0056 16.4 3.8 0.0081 15.9 3.8 1.2 1 0 0 1 1 1 1 Yip1 domain MscS_TM PF12794.7 AHX11054.1 - 0.027 13.3 1.5 0.59 8.9 2.9 1.9 1 1 1 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 DUF679 PF05078.12 AHX11055.1 - 0.045 13.7 0.5 0.52 10.3 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF679) DUF3021 PF11457.8 AHX11055.1 - 1.1 9.6 7.7 0.098 13.0 1.8 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3021) DUF2070 PF09843.9 AHX11055.1 - 1.4 7.2 3.5 0.93 7.7 0.3 1.8 2 0 0 2 2 2 0 Predicted membrane protein (DUF2070) PHO4 PF01384.20 AHX11056.1 - 0.065 12.3 0.1 0.072 12.1 0.1 1.0 1 0 0 1 1 1 0 Phosphate transporter family BPD_transp_2 PF02653.16 AHX11056.1 - 0.066 12.4 2.4 0.096 11.8 2.4 1.4 1 1 0 1 1 1 0 Branched-chain amino acid transport system / permease component DUF4079 PF13301.6 AHX11058.1 - 0.19 11.9 3.1 0.21 11.8 0.1 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4079) Phage_holin_3_6 PF07332.11 AHX11058.1 - 5.1 7.2 11.8 2.7 8.1 0.0 2.2 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3681 PF12442.8 AHX11058.1 - 7.1 7.2 9.1 0.79 10.2 2.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3681) GatB_N PF02934.15 AHX11059.1 - 1.5e-107 359.1 0.0 1.9e-107 358.7 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 AHX11059.1 - 6.6e-42 142.9 0.1 1.1e-41 142.2 0.1 1.3 1 0 0 1 1 1 1 GatB domain MafB19-deam PF14437.6 AHX11060.1 - 9.6e-22 77.2 0.0 1.1e-21 77.1 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase dCMP_cyt_deam_1 PF00383.23 AHX11060.1 - 1.1e-21 76.6 0.0 1.3e-21 76.3 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Bd3614-deam PF14439.6 AHX11060.1 - 0.013 15.6 0.5 0.22 11.6 0.5 2.1 1 1 0 1 1 1 0 Bd3614-like deaminase APOBEC2 PF18772.1 AHX11060.1 - 0.036 14.1 0.0 0.051 13.6 0.0 1.2 1 0 0 1 1 1 0 APOBEC2 SNAD4 PF18750.1 AHX11060.1 - 0.037 14.2 0.0 0.06 13.5 0.0 1.3 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC3 PF18771.1 AHX11060.1 - 0.17 12.0 0.0 0.26 11.4 0.0 1.4 1 1 0 1 1 1 0 APOBEC3 Glyco_tran_28_C PF04101.16 AHX11061.1 - 8.1e-33 113.8 0.0 1.2e-32 113.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_28 PF03033.20 AHX11061.1 - 1.5e-23 83.4 0.1 3.9e-22 78.8 0.0 2.3 2 0 0 2 2 2 1 Glycosyltransferase family 28 N-terminal domain NDUF_B8 PF05821.11 AHX11061.1 - 0.27 11.0 0.2 0.69 9.8 0.1 1.6 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) Formyl_trans_N PF00551.19 AHX11062.1 - 4.7e-31 107.9 0.0 6.6e-31 107.4 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase Formyl_trans_C PF02911.18 AHX11062.1 - 3.9e-07 30.2 0.0 7.5e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 Formyl transferase, C-terminal domain NAD_synthase PF02540.17 AHX11063.1 - 2.4e-75 252.7 0.2 3e-75 252.5 0.2 1.0 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.21 AHX11063.1 - 7.4e-07 29.1 0.0 8.9e-07 28.9 0.0 1.3 1 1 0 1 1 1 1 Asparagine synthase QueC PF06508.13 AHX11063.1 - 1e-06 28.4 0.1 2.2e-06 27.3 0.0 1.6 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 AHX11063.1 - 0.00014 21.6 0.0 0.00024 20.7 0.0 1.4 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 AHX11063.1 - 0.00035 19.5 0.0 0.0006 18.7 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase DNA_pol3_alpha PF07733.12 AHX11063.1 - 0.01 15.4 0.2 0.7 9.4 0.0 2.3 2 0 0 2 2 2 0 Bacterial DNA polymerase III alpha NTPase domain ATP_bind_3 PF01171.20 AHX11063.1 - 0.079 12.7 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 PP-loop family BPL_LplA_LipB PF03099.19 AHX11064.1 - 9.7e-10 38.5 0.0 1.4e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family TruB_N PF01509.18 AHX11065.1 - 2.7e-49 167.4 0.0 3.3e-49 167.1 0.0 1.1 1 0 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 AHX11065.1 - 3.3e-05 23.9 0.0 5.5e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain Mid2 PF04478.12 AHX11066.1 - 0.076 12.9 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor AJAP1_PANP_C PF15298.6 AHX11066.1 - 0.14 12.4 0.0 0.15 12.3 0.0 1.0 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF4244 PF14029.6 AHX11066.1 - 0.22 11.0 1.3 0.37 10.3 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4244) Cadherin_C_2 PF16492.5 AHX11068.1 - 0.018 15.8 0.0 0.033 14.9 0.0 1.5 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal AAA_2 PF07724.14 AHX11076.1 - 1.2e-56 191.5 0.1 3.1e-55 186.9 0.0 3.0 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 AHX11076.1 - 1.5e-35 121.2 4.5 1.5e-35 121.2 4.5 2.9 1 1 1 2 2 2 1 AAA lid domain ClpB_D2-small PF10431.9 AHX11076.1 - 1e-25 89.6 1.2 3.6e-25 87.8 0.0 2.7 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 AHX11076.1 - 4e-23 82.3 0.0 7.4e-13 49.1 0.0 3.2 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Clp_N PF02861.20 AHX11076.1 - 8.5e-22 77.0 1.0 4.9e-10 39.4 0.0 3.0 2 0 0 2 2 2 2 Clp amino terminal domain, pathogenicity island component AAA_5 PF07728.14 AHX11076.1 - 5.7e-18 65.2 0.8 4.8e-13 49.3 0.0 3.9 3 1 1 4 4 4 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 AHX11076.1 - 1.1e-10 42.2 8.3 6.6e-06 26.6 0.0 5.1 4 3 0 5 5 4 2 AAA ATPase domain Sigma54_activat PF00158.26 AHX11076.1 - 1.6e-07 31.2 0.4 0.00023 20.9 0.1 2.8 2 0 0 2 2 2 2 Sigma-54 interaction domain IstB_IS21 PF01695.17 AHX11076.1 - 2.7e-07 30.5 0.0 0.1 12.3 0.0 3.6 3 0 0 3 3 3 2 IstB-like ATP binding protein TniB PF05621.11 AHX11076.1 - 2.7e-06 26.9 0.0 0.0015 18.0 0.0 3.4 2 1 0 2 2 2 1 Bacterial TniB protein AAA_7 PF12775.7 AHX11076.1 - 1.6e-05 24.5 0.0 0.098 12.2 0.0 2.7 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_22 PF13401.6 AHX11076.1 - 3e-05 24.3 3.7 0.21 11.8 0.0 4.3 3 3 0 3 3 3 2 AAA domain Mg_chelatase PF01078.21 AHX11076.1 - 9e-05 22.0 0.5 2.4 7.5 0.0 3.5 2 1 0 3 3 3 1 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 AHX11076.1 - 0.00016 21.6 0.0 0.9 9.4 0.0 2.9 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 AHX11076.1 - 0.00019 21.7 0.0 0.67 10.2 0.0 2.7 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase AAA_23 PF13476.6 AHX11076.1 - 0.00022 21.8 18.8 0.0062 17.1 9.5 4.0 4 1 0 4 4 3 1 AAA domain AAA_18 PF13238.6 AHX11076.1 - 0.00025 21.6 1.7 0.99 10.0 0.0 3.7 4 1 0 4 4 2 2 AAA domain TsaE PF02367.17 AHX11076.1 - 0.00043 20.3 0.0 0.83 9.7 0.0 2.8 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 AHX11076.1 - 0.00048 20.1 6.4 0.4 10.6 0.0 5.0 3 2 2 5 5 5 2 ATPase domain predominantly from Archaea RuvB_N PF05496.12 AHX11076.1 - 0.00056 19.7 3.5 0.81 9.4 0.0 3.9 3 1 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain zf-C4H2 PF10146.9 AHX11076.1 - 0.00077 19.8 12.5 0.15 12.3 12.0 2.5 2 1 0 2 2 2 1 Zinc finger-containing protein DNA_pol3_delta2 PF13177.6 AHX11076.1 - 0.00079 19.2 0.8 5.1 6.9 0.0 3.7 3 0 0 3 3 3 0 DNA polymerase III, delta subunit AAA_24 PF13479.6 AHX11076.1 - 0.002 17.9 0.0 0.5 10.1 0.0 2.9 2 1 0 2 2 2 1 AAA domain AAA_3 PF07726.11 AHX11076.1 - 0.0029 17.5 0.1 1.3 8.9 0.0 3.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 AHX11076.1 - 0.0072 16.2 0.0 0.42 10.5 0.0 3.0 3 0 0 3 3 2 1 NACHT domain AAA_29 PF13555.6 AHX11076.1 - 0.008 15.9 0.1 0.57 10.0 0.0 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain RNA_helicase PF00910.22 AHX11076.1 - 0.0083 16.5 0.0 6 7.3 0.0 2.7 2 0 0 2 2 2 0 RNA helicase Torsin PF06309.11 AHX11076.1 - 0.018 15.2 0.0 0.051 13.7 0.0 1.8 1 0 0 1 1 1 0 Torsin AAA_28 PF13521.6 AHX11076.1 - 0.018 15.3 0.0 11 6.2 0.0 3.2 3 0 0 3 3 3 0 AAA domain ResIII PF04851.15 AHX11076.1 - 0.027 14.5 0.7 1.7 8.6 0.0 3.7 4 0 0 4 4 4 0 Type III restriction enzyme, res subunit AAA_33 PF13671.6 AHX11076.1 - 0.033 14.4 0.0 7 6.8 0.0 2.9 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 AHX11076.1 - 0.044 13.1 0.1 4.4 6.5 0.0 3.1 2 1 0 2 2 2 0 Zeta toxin DUF3870 PF12986.7 AHX11076.1 - 0.045 14.0 0.1 2.1 8.7 0.1 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3870) AAA_19 PF13245.6 AHX11076.1 - 0.06 13.7 0.1 0.99 9.7 0.0 2.8 3 0 0 3 3 2 0 AAA domain ABC_tran PF00005.27 AHX11076.1 - 0.13 12.8 2.0 6.8 7.2 0.0 3.6 3 1 0 3 3 3 0 ABC transporter Z1 PF10593.9 AHX11076.1 - 0.18 11.3 1.0 0.52 9.8 1.0 1.8 1 0 0 1 1 1 0 Z1 domain HAUS2 PF15003.6 AHX11076.1 - 2.9 7.6 13.4 0.32 10.7 5.2 3.0 3 1 0 3 3 2 0 HAUS augmin-like complex subunit 2 FapA PF03961.13 AHX11076.1 - 3 6.3 15.4 0.3 9.6 9.9 2.0 2 1 0 2 2 2 0 Flagellar Assembly Protein A 5_nucleotid PF05761.14 AHX11076.1 - 8.2 5.2 5.7 15 4.3 5.7 1.3 1 0 0 1 1 1 0 5' nucleotidase family RNase_E_G PF10150.9 AHX11077.1 - 6.8e-79 265.1 3.6 9.1e-79 264.7 3.6 1.2 1 0 0 1 1 1 1 Ribonuclease E/G family S1 PF00575.23 AHX11077.1 - 4.2e-09 36.6 0.2 7.8e-08 32.6 0.1 2.8 2 0 0 2 2 2 1 S1 RNA binding domain FBPase_glpX PF03320.13 AHX11077.1 - 0.043 12.7 0.0 0.089 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DnaJ_CXXCXGXG PF00684.19 AHX11077.1 - 0.13 12.7 0.1 0.23 11.9 0.1 1.4 1 0 0 1 1 1 0 DnaJ central domain 60KD_IMP PF02096.20 AHX11078.1 - 8.2 6.3 10.2 1.4 8.8 3.5 2.6 2 1 0 2 2 2 0 60Kd inner membrane protein QRPTase_C PF01729.19 AHX11079.1 - 1.7e-52 177.6 0.5 2.5e-52 177.0 0.5 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 AHX11079.1 - 1.4e-15 57.1 0.0 2.7e-15 56.2 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain TMP-TENI PF02581.17 AHX11079.1 - 0.041 13.2 0.2 0.19 11.0 0.1 2.1 2 1 0 2 2 2 0 Thiamine monophosphate synthase Ribul_P_3_epim PF00834.19 AHX11079.1 - 0.082 12.3 0.1 0.26 10.6 0.1 1.9 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family Ribosomal_S16 PF00886.19 AHX11081.1 - 4.4e-26 90.7 0.0 5.3e-26 90.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S16 RimM PF01782.18 AHX11082.1 - 4.6e-10 39.6 0.1 2.3e-09 37.3 0.1 2.0 1 1 0 1 1 1 1 RimM N-terminal domain PRC PF05239.16 AHX11082.1 - 0.00012 22.1 0.0 0.00027 20.9 0.0 1.7 2 0 0 2 2 2 1 PRC-barrel domain RmuC PF02646.16 AHX11083.1 - 3.5e-85 285.7 3.0 3.5e-85 285.7 3.0 1.8 2 0 0 2 2 2 1 RmuC family Abi_2 PF07751.11 AHX11083.1 - 0.061 13.6 0.3 0.061 13.6 0.3 2.4 2 2 0 2 2 2 0 Abi-like protein LMBR1 PF04791.16 AHX11083.1 - 0.1 11.5 1.2 0.12 11.3 1.2 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein TPD PF14811.6 AHX11083.1 - 0.11 12.4 2.2 0.14 12.1 0.1 2.2 3 0 0 3 3 3 0 Protein of unknown function TPD sequence-motif CENP-H PF05837.12 AHX11083.1 - 1.7 9.1 7.3 10 6.5 0.3 2.8 2 0 0 2 2 2 0 Centromere protein H (CENP-H) CENP-F_leu_zip PF10473.9 AHX11083.1 - 3.9 7.5 14.3 4.5 7.3 8.7 3.2 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PAS_9 PF13426.7 AHX11084.1 - 6.9e-06 26.3 0.0 1.5e-05 25.2 0.0 1.5 1 0 0 1 1 1 1 PAS domain Sigma_1s PF02454.16 AHX11084.1 - 0.076 13.0 0.2 0.18 11.8 0.2 1.6 1 0 0 1 1 1 0 Sigma 1s protein PAS_4 PF08448.10 AHX11084.1 - 0.12 12.7 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 PAS fold TatC PF00902.18 AHX11085.1 - 7.7e-64 215.3 16.2 9e-64 215.1 16.2 1.0 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) PrmC_N PF17827.1 AHX11086.1 - 5.3e-10 39.8 0.0 1.2e-09 38.6 0.1 1.6 2 0 0 2 2 2 1 PrmC N-terminal domain MTS PF05175.14 AHX11086.1 - 6.5e-09 35.6 0.0 7.4e-08 32.1 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 AHX11086.1 - 2.2e-08 34.1 0.0 3.5e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 AHX11086.1 - 1.3e-05 24.7 0.0 1.8e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase UPF0020 PF01170.18 AHX11086.1 - 2e-05 24.4 0.0 3e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 AHX11086.1 - 3.5e-05 24.4 0.0 8.5e-05 23.2 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 AHX11086.1 - 0.00028 20.6 0.0 0.00047 19.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 AHX11086.1 - 0.0019 18.1 0.0 0.009 15.9 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 AHX11086.1 - 0.035 13.5 0.0 0.051 13.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Eco57I PF07669.11 AHX11086.1 - 0.21 12.1 0.0 0.38 11.3 0.0 1.5 1 0 0 1 1 1 0 Eco57I restriction-modification methylase Synaptobrevin PF00957.21 AHX11087.1 - 1.5 8.7 4.5 3.2 7.6 0.2 3.1 3 0 0 3 3 3 0 Synaptobrevin ATP-synt_ab PF00006.25 AHX11089.1 - 2e-74 249.9 0.1 6e-74 248.3 0.0 1.7 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 AHX11089.1 - 1e-43 148.6 1.9 1.9e-43 147.8 1.9 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 AHX11089.1 - 2.3e-08 34.4 2.8 6.8e-08 32.9 2.8 1.8 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain ATPase PF06745.13 AHX11089.1 - 0.042 13.2 0.2 0.14 11.5 0.2 2.0 1 1 1 2 2 2 0 KaiC OSCP PF00213.18 AHX11090.1 - 1.1e-24 87.4 0.3 1.5e-24 87.0 0.3 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit HTH_9 PF08221.11 AHX11090.1 - 0.13 12.4 0.6 2.5 8.2 0.1 2.2 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain 5-FTHF_cyc-lig PF01812.20 AHX11092.1 - 1.4e-25 90.3 0.0 1.5e-25 90.1 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family YgbB PF02542.16 AHX11094.1 - 1.8e-54 184.2 0.0 2.1e-54 184.0 0.0 1.0 1 0 0 1 1 1 1 YgbB family MacB_PCD PF12704.7 AHX11096.1 - 5.8e-16 59.4 2.8 1.3e-15 58.3 2.8 1.6 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 AHX11096.1 - 1e-08 35.5 4.3 1e-08 35.5 4.3 3.4 3 0 0 3 3 3 1 FtsX-like permease family NPCC PF08058.11 AHX11096.1 - 0.021 14.9 0.4 0.055 13.5 0.4 1.7 1 0 0 1 1 1 0 Nuclear pore complex component TMEM117 PF15113.6 AHX11096.1 - 0.028 13.4 2.0 0.05 12.5 2.0 1.3 1 0 0 1 1 1 0 TMEM117 protein family Trp_oprn_chp PF09534.10 AHX11096.1 - 0.12 12.1 0.5 0.45 10.3 0.0 1.9 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) PseudoU_synth_2 PF00849.22 AHX11097.1 - 3.1e-34 118.4 0.7 4.3e-34 117.9 0.7 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 AHX11097.1 - 3.2e-06 26.8 0.1 6.5e-06 25.8 0.1 1.6 1 0 0 1 1 1 1 S4 domain Phage_integrase PF00589.22 AHX11099.1 - 3.5e-43 147.3 0.1 4.9e-43 146.9 0.1 1.2 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 AHX11099.1 - 2.3e-14 53.5 0.9 1.4e-13 51.0 0.5 2.4 2 1 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 AHX11099.1 - 2.1e-07 31.3 1.4 6.4e-07 29.8 0.8 2.0 2 1 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 AHX11099.1 - 0.0016 18.7 0.8 0.0041 17.4 0.8 1.6 1 0 0 1 1 1 1 Phage integrase SAM-like domain Phage_integr_3 PF16795.5 AHX11099.1 - 0.0095 15.9 0.0 0.12 12.3 0.0 2.3 2 0 0 2 2 2 1 Archaeal phage integrase HTH_52 PF18576.1 AHX11099.1 - 0.036 14.3 0.0 0.29 11.4 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Acetyltransf_11 PF13720.6 AHX11099.1 - 0.066 13.7 0.2 0.51 10.8 0.1 2.4 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DeoC PF01791.9 AHX11102.1 - 5.2e-28 98.3 0.0 6.1e-28 98.0 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase Orf78 PF06024.12 AHX11103.1 - 0.0088 16.3 1.1 5.3 7.4 0.0 2.5 2 0 0 2 2 2 2 Orf78 (ac78) TMEM190 PF15431.6 AHX11103.1 - 0.19 11.9 0.4 0.28 11.3 0.4 1.4 1 1 0 1 1 1 0 Transmembrane protein 190 HlyD_3 PF13437.6 AHX11106.1 - 4.3e-17 62.8 0.2 9e-15 55.3 0.0 2.4 2 0 0 2 2 2 1 HlyD family secretion protein HlyD_D23 PF16576.5 AHX11106.1 - 1e-12 47.7 0.0 2e-12 46.8 0.0 1.4 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 AHX11106.1 - 5.9e-08 32.4 5.3 0.0021 17.9 0.8 3.1 3 0 0 3 3 3 2 Biotin-lipoyl like QRPTase_N PF02749.16 AHX11106.1 - 0.0002 21.3 0.1 0.0053 16.8 0.0 2.8 2 1 1 3 3 3 1 Quinolinate phosphoribosyl transferase, N-terminal domain Biotin_lipoyl PF00364.22 AHX11106.1 - 0.018 14.8 5.8 0.26 11.2 0.1 3.2 3 0 0 3 3 3 0 Biotin-requiring enzyme DUF2931 PF11153.8 AHX11106.1 - 0.14 11.9 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) Na_Ala_symp PF01235.17 AHX11108.1 - 1.3e-80 271.6 29.7 1.7e-80 271.3 29.7 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family Amidohydro_1 PF01979.20 AHX11109.1 - 1.4e-30 106.8 2.7 3.5e-30 105.5 2.7 1.6 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AHX11109.1 - 1.1e-12 48.2 0.0 1.6e-07 31.1 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family DHOase PF12890.7 AHX11109.1 - 4.8e-10 39.5 0.0 1.4e-09 38.0 0.0 1.8 2 0 0 2 2 2 1 Dihydro-orotase-like TatD_DNase PF01026.21 AHX11109.1 - 0.0046 16.4 0.1 0.042 13.2 0.0 2.0 2 0 0 2 2 2 1 TatD related DNase tRNA-synt_2c PF01411.19 AHX11110.1 - 8.3e-195 648.4 0.0 1.1e-194 648.0 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 AHX11110.1 - 1.7e-16 60.0 1.4 4.5e-16 58.7 1.4 1.8 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain CitMHS PF03600.16 AHX11111.1 - 2e-28 99.4 55.0 1.1e-19 70.8 36.5 2.1 1 1 1 2 2 2 2 Citrate transporter Na_sulph_symp PF00939.19 AHX11111.1 - 1.6e-08 34.1 35.4 4.5e-07 29.3 11.8 2.6 2 1 0 2 2 2 2 Sodium:sulfate symporter transmembrane region TPPII PF12580.8 AHX11111.1 - 0.19 11.2 0.3 0.33 10.4 0.3 1.3 1 0 0 1 1 1 0 Tripeptidyl peptidase II Phage_holin_2_4 PF16082.5 AHX11111.1 - 3.9 7.3 7.1 1.1 9.1 0.4 3.0 3 0 0 3 3 3 0 Bacteriophage holin family, superfamily II-like CcmB PF03379.13 AHX11112.1 - 5.9e-11 42.3 4.1 7.7e-11 41.9 4.1 1.1 1 0 0 1 1 1 1 CcmB protein zf-dskA_traR PF01258.17 AHX11113.1 - 4.6e-08 32.9 1.0 6e-08 32.5 0.1 1.7 2 0 0 2 2 2 1 Prokaryotic dksA/traR C4-type zinc finger IDEAL PF08858.10 AHX11113.1 - 0.0014 18.3 0.9 0.011 15.4 1.2 2.2 2 0 0 2 2 2 1 IDEAL domain DUF3683 PF12447.8 AHX11113.1 - 0.086 13.0 0.0 0.094 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3683) DUF5564 PF17719.1 AHX11113.1 - 0.11 12.7 0.1 0.19 11.9 0.0 1.4 2 0 0 2 2 2 0 Family of unknown function (DUF5564) Thy1 PF02511.15 AHX11114.1 - 2.4e-56 190.5 2.7 3.7e-56 189.9 2.7 1.3 1 0 0 1 1 1 1 Thymidylate synthase complementing protein Band_7 PF01145.25 AHX11115.1 - 4.9e-24 85.3 0.1 8e-24 84.6 0.1 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family Lambda_Kil PF06301.11 AHX11115.1 - 0.074 12.7 0.0 0.16 11.6 0.0 1.6 1 0 0 1 1 1 0 Bacteriophage lambda Kil protein Pam16 PF03656.13 AHX11115.1 - 0.15 12.1 1.1 0.28 11.2 0.1 1.9 2 0 0 2 2 2 0 Pam16 Band_7 PF01145.25 AHX11116.1 - 1.6e-30 106.5 1.0 2.1e-30 106.0 1.0 1.1 1 0 0 1 1 1 1 SPFH domain / Band 7 family Gp49 PF05973.14 AHX11116.1 - 0.00087 19.4 0.1 0.0037 17.4 0.1 1.9 2 0 0 2 2 2 1 Phage derived protein Gp49-like (DUF891) DivIVA PF05103.13 AHX11116.1 - 0.028 14.5 3.0 0.048 13.7 3.0 1.4 1 0 0 1 1 1 0 DivIVA protein HHH_8 PF14716.6 AHX11116.1 - 0.35 11.3 3.6 1.1 9.7 3.6 1.8 2 0 0 2 2 2 0 Helix-hairpin-helix domain Trypsin_2 PF13365.6 AHX11117.1 - 2.6e-32 112.8 0.6 4.2e-32 112.1 0.6 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 AHX11117.1 - 3.4e-20 72.1 4.3 1.9e-14 53.7 0.4 2.5 2 0 0 2 2 2 2 PDZ domain Trypsin PF00089.26 AHX11117.1 - 3.9e-16 59.5 0.6 6.6e-16 58.8 0.6 1.3 1 0 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 AHX11117.1 - 3.9e-12 45.8 0.5 2e-07 30.8 0.1 2.9 3 0 0 3 3 3 2 PDZ domain PDZ PF00595.24 AHX11117.1 - 8.4e-12 45.3 7.8 3.9e-08 33.5 0.8 2.7 2 0 0 2 2 2 2 PDZ domain Peptidase_S46 PF10459.9 AHX11117.1 - 4.3e-05 22.4 1.1 0.13 10.9 0.0 2.2 2 0 0 2 2 2 2 Peptidase S46 Helo_like_N PF17111.5 AHX11117.1 - 0.013 14.9 0.1 2 7.7 0.0 2.4 2 0 0 2 2 2 0 Fungal N-terminal domain of STAND proteins Tricorn_PDZ PF14685.6 AHX11117.1 - 0.014 15.3 0.3 0.25 11.3 0.1 2.5 2 0 0 2 2 2 0 Tricorn protease PDZ domain Peptidase_S32 PF05579.13 AHX11117.1 - 0.021 14.0 1.3 0.71 9.0 0.3 2.2 2 0 0 2 2 2 0 Equine arteritis virus serine endopeptidase S32 Peptidase_S7 PF00949.21 AHX11117.1 - 0.031 14.1 0.3 0.13 12.0 0.5 1.9 2 0 0 2 2 2 0 Peptidase S7, Flavivirus NS3 serine protease Peptidase_S29 PF02907.15 AHX11117.1 - 0.082 12.6 0.1 0.19 11.4 0.1 1.6 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease DNA_pol3_alpha PF07733.12 AHX11118.1 - 4.9e-102 341.0 0.0 5.9e-100 334.2 0.0 2.6 2 0 0 2 2 2 2 Bacterial DNA polymerase III alpha NTPase domain DNA_pol3_finger PF17657.1 AHX11118.1 - 8.8e-59 197.6 0.0 1.7e-58 196.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain HHH_6 PF14579.6 AHX11118.1 - 7.7e-18 64.5 0.2 2.8e-17 62.8 0.1 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif PHP PF02811.19 AHX11118.1 - 3.9e-08 33.8 0.0 8.5e-08 32.7 0.0 1.6 1 0 0 1 1 1 1 PHP domain Cu-oxidase_4 PF02578.15 AHX11119.1 - 7.8e-47 159.8 0.0 1.1e-46 159.3 0.0 1.2 1 0 0 1 1 1 1 Multi-copper polyphenol oxidoreductase laccase Smr PF01713.21 AHX11119.1 - 1.5e-14 54.1 0.0 3.9e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Smr domain VHP PF02209.19 AHX11119.1 - 0.13 12.3 0.1 0.28 11.3 0.1 1.5 1 0 0 1 1 1 0 Villin headpiece domain DNA_pol3_beta_2 PF02767.16 AHX11120.1 - 1.7e-28 99.2 2.4 2.2e-23 82.7 0.1 2.5 3 0 0 3 3 3 2 DNA polymerase III beta subunit, central domain DNA_pol3_beta_3 PF02768.15 AHX11120.1 - 1.1e-24 86.6 1.0 1.1e-23 83.3 0.1 2.7 2 1 1 3 3 3 1 DNA polymerase III beta subunit, C-terminal domain DNA_pol3_beta PF00712.19 AHX11120.1 - 2.2e-20 73.0 5.5 7.3e-12 45.5 0.6 3.1 3 0 0 3 3 3 3 DNA polymerase III beta subunit, N-terminal domain HlyD_D23 PF16576.5 AHX11120.1 - 0.062 12.5 0.0 0.14 11.4 0.0 1.6 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion SGS PF05002.15 AHX11120.1 - 0.12 12.5 0.1 0.23 11.6 0.1 1.4 1 0 0 1 1 1 0 SGS domain Iso_dh PF00180.20 AHX11121.1 - 5e-89 298.9 0.5 6.3e-89 298.5 0.5 1.1 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase TT1725 PF18324.1 AHX11121.1 - 4.5e-20 71.8 0.0 1.5e-19 70.1 0.0 2.0 2 0 0 2 2 2 1 Hypothetical protein TT1725 DUF2712 PF10916.8 AHX11121.1 - 0.026 15.2 1.2 0.035 14.8 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2712) Mem_trans PF03547.18 AHX11122.1 - 1.6e-10 40.0 21.5 2.9e-07 29.3 7.5 2.1 1 1 1 2 2 2 2 Membrane transport protein ATP_synt_H PF05493.13 AHX11122.1 - 0.064 13.7 1.7 0.064 13.7 1.7 3.2 2 1 1 3 3 3 0 ATP synthase subunit H Peptidase_M16_C PF05193.21 AHX11124.1 - 1.3e-39 136.2 0.0 2.7e-39 135.1 0.0 1.5 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 AHX11124.1 - 5.7e-39 133.5 0.0 4.7e-38 130.5 0.0 2.0 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) DDR PF08841.10 AHX11124.1 - 0.04 12.9 0.3 0.19 10.7 0.0 2.0 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain AAA_5 PF07728.14 AHX11124.1 - 0.095 12.7 0.1 0.3 11.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Proteasome PF00227.26 AHX11125.1 - 9.5e-26 90.5 2.3 3.3e-25 88.7 2.3 1.7 1 1 0 1 1 1 1 Proteasome subunit AAA_2 PF07724.14 AHX11126.1 - 2.8e-39 134.9 0.1 1.2e-30 106.9 0.1 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA PF00004.29 AHX11126.1 - 3.6e-14 53.3 0.1 6.3e-07 29.9 0.0 3.3 3 1 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AHX11126.1 - 3.2e-06 27.2 0.3 0.00033 20.6 0.0 3.1 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) ClpB_D2-small PF10431.9 AHX11126.1 - 1.6e-05 24.8 1.8 0.00012 22.1 0.0 2.6 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA_22 PF13401.6 AHX11126.1 - 4.9e-05 23.6 0.1 0.0011 19.2 0.0 2.7 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 AHX11126.1 - 0.00084 19.8 0.0 0.0027 18.1 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 AHX11126.1 - 0.00094 19.0 0.5 0.013 15.2 0.0 2.6 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 AHX11126.1 - 0.0017 18.1 0.0 0.067 12.9 0.0 2.9 3 0 0 3 3 3 1 Sigma-54 interaction domain Mg_chelatase PF01078.21 AHX11126.1 - 0.0034 16.8 0.1 0.019 14.4 0.0 2.3 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 AHX11126.1 - 0.0038 16.5 0.0 0.16 11.3 0.0 2.4 2 0 0 2 2 2 1 Zeta toxin MCM PF00493.23 AHX11126.1 - 0.011 14.8 0.2 0.79 8.8 0.0 2.4 2 0 0 2 2 2 0 MCM P-loop domain AAA_33 PF13671.6 AHX11126.1 - 0.012 15.7 0.0 0.029 14.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain Torsin PF06309.11 AHX11126.1 - 0.015 15.4 0.0 0.057 13.5 0.0 1.9 2 0 0 2 2 2 0 Torsin AAA_18 PF13238.6 AHX11126.1 - 0.024 15.2 0.1 0.084 13.4 0.0 2.0 1 1 1 2 2 2 0 AAA domain TniB PF05621.11 AHX11126.1 - 0.026 13.9 0.2 0.12 11.8 0.0 2.0 2 0 0 2 2 2 0 Bacterial TniB protein IstB_IS21 PF01695.17 AHX11126.1 - 0.04 13.7 0.1 0.33 10.7 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 AHX11126.1 - 0.051 13.1 0.0 0.38 10.2 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_28 PF13521.6 AHX11126.1 - 0.1 12.9 0.1 0.27 11.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain IPT PF01745.16 AHX11126.1 - 0.13 11.7 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 Isopentenyl transferase IspD PF01128.19 AHX11127.1 - 4e-53 180.4 0.0 4.5e-53 180.3 0.0 1.0 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transf_3 PF12804.7 AHX11127.1 - 2.5e-11 44.2 0.0 2.8e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 AHX11127.1 - 7.5e-05 22.4 0.0 8.7e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase DHO_dh PF01180.21 AHX11128.1 - 8e-88 294.4 0.2 9.2e-88 294.3 0.2 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Spiralin PF05215.13 AHX11128.1 - 0.033 13.5 3.1 0.058 12.7 3.1 1.4 1 1 0 1 1 1 0 Spiralin EPSP_synthase PF00275.20 AHX11129.1 - 5.3e-38 130.8 0.1 7e-38 130.4 0.1 1.1 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AsmA_2 PF13502.6 AHX11132.1 - 2.2e-08 33.9 5.0 3.8e-07 29.9 0.4 4.0 2 2 1 3 3 3 2 AsmA-like C-terminal region AsmA_1 PF13109.6 AHX11132.1 - 0.00017 21.2 0.4 0.00017 21.2 0.4 5.3 5 1 0 5 5 5 2 AsmA-like C-terminal region MrpF_PhaF PF04066.13 AHX11133.1 - 1.1e-07 32.1 4.0 1.1e-07 32.1 4.0 1.6 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) DUF1304 PF06993.12 AHX11133.1 - 0.035 14.1 2.0 0.04 13.9 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1304) NTP_transf_3 PF12804.7 AHX11134.1 - 5.4e-19 69.1 0.0 7.8e-19 68.6 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 AHX11134.1 - 8.3e-17 60.2 15.7 0.00013 21.6 1.3 4.4 2 1 2 4 4 4 4 Bacterial transferase hexapeptide (six repeats) NTP_transferase PF00483.23 AHX11134.1 - 5.4e-09 36.0 0.0 7.6e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase IspD PF01128.19 AHX11134.1 - 8.6e-07 28.9 0.0 1.7e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CofC PF01983.16 AHX11134.1 - 1.5e-05 24.3 0.0 0.00012 21.3 0.0 2.2 2 0 0 2 2 2 1 Guanylyl transferase CofC like Hexapep_2 PF14602.6 AHX11134.1 - 0.0053 16.5 15.0 0.15 11.9 0.0 5.1 4 1 2 6 6 6 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 AHX11134.1 - 0.011 14.8 0.0 0.021 13.8 0.0 1.4 1 0 0 1 1 1 0 L-fucokinase AICARFT_IMPCHas PF01808.18 AHX11135.1 - 2.1e-100 336.0 0.4 2.7e-100 335.6 0.4 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 AHX11135.1 - 5.7e-21 74.5 1.0 1.4e-20 73.3 0.0 2.1 3 0 0 3 3 3 1 MGS-like domain GSH-S_ATP PF02955.16 AHX11136.1 - 6.3e-38 129.9 0.2 1.8e-37 128.5 0.0 1.8 3 0 0 3 3 3 1 Prokaryotic glutathione synthetase, ATP-grasp domain GSH-S_N PF02951.14 AHX11136.1 - 7.1e-24 84.2 0.0 1.4e-23 83.3 0.0 1.5 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, N-terminal domain RimK PF08443.11 AHX11136.1 - 1.6e-12 47.5 0.0 2.8e-12 46.6 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_YheCD PF14398.6 AHX11136.1 - 0.0008 18.7 0.0 0.0092 15.3 0.0 2.1 2 0 0 2 2 2 1 YheC/D like ATP-grasp DUF3243 PF11588.8 AHX11137.1 - 0.014 15.7 0.0 0.03 14.6 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3243) NMO PF03060.15 AHX11138.1 - 3.9e-10 39.6 0.0 1.2e-09 38.1 0.0 1.9 2 1 0 2 2 2 1 Nitronate monooxygenase Bac_DnaA PF00308.18 AHX11139.1 - 6e-09 36.1 2.1 3.4e-08 33.6 1.0 2.0 1 1 0 2 2 2 1 Bacterial dnaA protein DNA_pol3_delta2 PF13177.6 AHX11139.1 - 0.013 15.3 0.7 0.023 14.5 0.7 1.4 1 1 0 1 1 1 0 DNA polymerase III, delta subunit AAA_22 PF13401.6 AHX11139.1 - 0.035 14.4 0.3 5.9 7.2 0.0 2.4 1 1 1 2 2 2 0 AAA domain tRNA-synt_1f PF01921.18 AHX11139.1 - 0.13 11.1 0.0 0.19 10.6 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (K) AI-2E_transport PF01594.16 AHX11140.1 - 2.5e-41 141.9 40.3 2.8e-41 141.7 40.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter ACR_tran PF00873.19 AHX11141.1 - 1.8e-155 519.2 30.4 2.1e-155 519.0 30.4 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 AHX11141.1 - 8.6e-05 21.6 12.6 8.6e-05 21.6 12.6 3.2 2 1 0 2 2 2 1 MMPL family AsnC_trans_reg PF01037.21 AHX11141.1 - 0.067 13.2 0.6 0.86 9.6 0.0 3.2 5 0 0 5 5 5 0 Lrp/AsnC ligand binding domain DUF2621 PF11084.8 AHX11141.1 - 0.11 12.5 0.0 0.41 10.6 0.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2621) CCB1 PF12046.8 AHX11141.1 - 0.65 9.3 6.8 0.19 11.0 0.4 2.9 2 0 0 2 2 2 0 Cofactor assembly of complex C subunit B GATase_7 PF13537.6 AHX11142.1 - 1e-20 73.8 0.0 2e-20 72.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 AHX11142.1 - 8.5e-20 71.3 0.0 1.3e-19 70.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 AHX11142.1 - 3.2e-06 26.7 0.0 6.1e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 AHX11142.1 - 0.017 14.6 0.1 0.12 11.9 0.1 2.0 1 1 0 1 1 1 0 Phosphoribosyl transferase Elong-fact-P_C PF09285.11 AHX11143.1 - 4.8e-21 74.3 0.7 9e-21 73.4 0.7 1.5 1 0 0 1 1 1 1 Elongation factor P, C-terminal EFP_N PF08207.12 AHX11143.1 - 2e-18 66.1 0.4 5.1e-18 64.8 0.4 1.7 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 AHX11143.1 - 3.1e-13 49.6 1.1 1e-12 47.9 0.3 2.2 3 0 0 3 3 3 1 Elongation factor P (EF-P) OB domain SmpA_OmlA PF04355.13 AHX11144.1 - 0.0086 15.8 0.1 0.014 15.2 0.1 1.3 1 0 0 1 1 1 1 SmpA / OmlA family LPAM_1 PF08139.12 AHX11144.1 - 0.28 11.8 1.9 0.6 10.7 1.9 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site SDF PF00375.18 AHX11145.1 - 1.2e-28 100.3 46.8 4.3e-28 98.4 46.8 1.7 1 1 0 1 1 1 1 Sodium:dicarboxylate symporter family SMC_N PF02463.19 AHX11146.1 - 5.2e-11 42.4 3.5 5.2e-05 22.8 0.4 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AHX11146.1 - 3.6e-07 30.3 2.8 0.0058 16.5 0.3 2.3 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 AHX11146.1 - 2.3e-05 24.9 0.2 0.0017 18.8 0.2 2.4 1 1 0 1 1 1 1 ABC transporter AAA_23 PF13476.6 AHX11146.1 - 3.7e-05 24.3 0.2 7.7e-05 23.3 0.2 1.6 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AHX11146.1 - 6.8e-05 22.7 1.1 0.00012 22.0 1.1 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 AHX11146.1 - 0.0026 18.2 0.2 0.047 14.1 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AHX11146.1 - 0.0065 16.2 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 AHX11146.1 - 0.025 14.2 0.1 0.32 10.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 AHX11146.1 - 0.045 13.2 0.1 0.14 11.7 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region SbcCD_C PF13558.6 AHX11146.1 - 0.069 13.4 0.8 0.45 10.8 0.8 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF815 PF05673.13 AHX11146.1 - 0.072 12.2 0.0 0.17 11.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) RsgA_GTPase PF03193.16 AHX11146.1 - 0.11 12.4 0.2 0.27 11.1 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase Cons_hypoth95 PF03602.15 AHX11148.1 - 3.7e-43 147.3 0.0 4.4e-43 147.0 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 AHX11148.1 - 1e-05 25.4 0.0 1.4e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AHX11148.1 - 1.6e-05 24.5 0.0 2e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain MethyltransfD12 PF02086.15 AHX11148.1 - 2e-05 24.4 0.3 0.13 12.0 0.0 2.2 1 1 1 2 2 2 2 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_25 PF13649.6 AHX11148.1 - 2.4e-05 24.9 0.0 3.7e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 AHX11148.1 - 0.00011 22.0 0.1 0.0034 17.1 0.1 2.1 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.13 AHX11148.1 - 0.0027 17.1 0.0 0.0043 16.5 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_12 PF08242.12 AHX11148.1 - 0.01 16.5 0.0 0.017 15.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain N6-adenineMlase PF10237.9 AHX11148.1 - 0.073 12.9 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase BolA PF01722.18 AHX11149.1 - 1.8e-12 47.4 0.0 2e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 BolA-like protein Glutaredoxin PF00462.24 AHX11150.1 - 2.1e-17 63.1 0.0 3.1e-17 62.5 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin SH3BGR PF04908.15 AHX11150.1 - 0.057 13.6 0.0 0.12 12.5 0.0 1.6 1 1 0 1 1 1 0 SH3-binding, glutamic acid-rich protein BPD_transp_1 PF00528.22 AHX11151.1 - 1.1e-17 64.4 16.0 1.1e-17 64.4 16.0 1.5 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component RTX PF02382.15 AHX11151.1 - 0.13 11.9 0.6 0.21 11.3 0.6 1.2 1 0 0 1 1 1 0 N-terminal domain in RTX protein MscL PF01741.18 AHX11151.1 - 2.6 8.3 7.0 14 6.0 0.8 2.6 2 1 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL GATase PF00117.28 AHX11153.1 - 0.00054 19.8 0.0 0.0083 15.9 0.0 2.1 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 AHX11153.1 - 0.0036 17.1 0.0 0.017 14.9 0.0 1.9 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 AHX11153.1 - 0.036 13.7 0.0 0.064 12.8 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain PriA_C PF18074.1 AHX11155.1 - 2.3e-17 63.6 0.1 2e-16 60.6 0.0 2.4 2 0 0 2 2 2 1 Primosomal protein N C-terminal domain PriA_3primeBD PF17764.1 AHX11155.1 - 4.4e-16 58.6 0.1 1e-15 57.4 0.1 1.7 1 0 0 1 1 1 1 3′ DNA-binding domain (3′BD) DEAD PF00270.29 AHX11155.1 - 1.8e-14 53.9 0.0 9.3e-13 48.3 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 AHX11155.1 - 2e-11 44.2 0.3 4.1e-07 30.3 0.0 3.0 2 0 0 2 2 2 2 Helicase conserved C-terminal domain PriA_CRR PF18319.1 AHX11155.1 - 1.9e-09 37.3 0.7 1.9e-09 37.3 0.7 2.5 3 0 0 3 3 3 1 PriA DNA helicase Cys-rich region (CRR) domain ResIII PF04851.15 AHX11155.1 - 1.6e-07 31.5 0.1 2.8e-07 30.7 0.1 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit PhoH PF02562.16 AHX11155.1 - 0.0032 17.0 0.0 0.0069 15.9 0.0 1.5 1 0 0 1 1 1 1 PhoH-like protein Cbl_N3 PF02762.14 AHX11155.1 - 0.025 14.4 0.0 0.1 12.5 0.0 2.0 2 0 0 2 2 2 0 CBL proto-oncogene N-terminus, SH2-like domain AAA_30 PF13604.6 AHX11155.1 - 0.028 14.1 0.0 0.064 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain AbiEi_4 PF13338.6 AHX11155.1 - 0.065 13.4 0.3 0.14 12.4 0.3 1.6 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin AAA_22 PF13401.6 AHX11155.1 - 0.084 13.1 0.0 0.28 11.4 0.0 1.9 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 AHX11155.1 - 0.09 12.0 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) zf-CHY PF05495.12 AHX11155.1 - 0.11 13.0 2.7 0.22 12.0 2.7 1.4 1 0 0 1 1 1 0 CHY zinc finger Anoctamin PF04547.12 AHX11156.1 - 9.4e-05 21.4 1.0 0.00017 20.5 1.0 1.4 1 0 0 1 1 1 1 Calcium-activated chloride channel YtpI PF14007.6 AHX11156.1 - 0.068 13.3 0.0 0.068 13.3 0.0 2.7 3 0 0 3 3 3 0 YtpI-like protein Abhydrolase_9_N PF15420.6 AHX11156.1 - 0.11 12.5 0.7 2.7 7.9 0.2 2.2 2 0 0 2 2 2 0 Alpha/beta-hydrolase family N-terminus MLANA PF14991.6 AHX11156.1 - 0.34 11.2 2.1 0.4 11.0 0.2 2.1 1 1 2 3 3 3 0 Protein melan-A Claudin_3 PF06653.11 AHX11156.1 - 1.9 8.4 12.2 1.1 9.1 5.3 3.1 3 1 0 3 3 3 0 Tight junction protein, Claudin-like TMEM192 PF14802.6 AHX11156.1 - 4.8 6.2 8.0 1.3 8.1 2.0 2.5 2 2 0 2 2 2 0 TMEM192 family ExoD PF06055.12 AHX11157.1 - 7.9e-56 188.3 6.2 9.6e-56 188.0 6.2 1.1 1 0 0 1 1 1 1 Exopolysaccharide synthesis, ExoD CagX PF03524.15 AHX11158.1 - 3.5e-64 216.4 0.0 4.1e-64 216.2 0.0 1.0 1 0 0 1 1 1 1 Conjugal transfer protein Chordopox_A35R PF05989.12 AHX11159.1 - 0.041 13.8 0.4 0.08 12.8 0.4 1.4 1 0 0 1 1 1 0 Chordopoxvirus A35R protein Doppel PF11466.8 AHX11159.1 - 0.13 11.9 2.7 0.23 11.2 2.7 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel GrpE PF01025.19 AHX11160.1 - 4.5e-46 156.5 5.9 5.5e-46 156.3 5.9 1.1 1 0 0 1 1 1 1 GrpE tRNA-synt_1b PF00579.25 AHX11161.1 - 6.4e-61 206.2 0.0 1.4e-60 205.1 0.0 1.6 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) Ribosomal_L20 PF00453.18 AHX11162.1 - 1.2e-47 160.4 3.7 1.4e-47 160.2 3.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L20 ApbE PF02424.15 AHX11162.1 - 0.14 11.7 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 ApbE family tRNA-synt_2d PF01409.20 AHX11163.1 - 1.3e-90 303.2 0.0 1.6e-90 302.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 AHX11163.1 - 0.02 14.3 0.0 0.59 9.5 0.0 2.4 2 1 0 2 2 2 0 Phenylalanyl tRNA synthetase beta chain CLM domain Phe_tRNA-synt_N PF02912.18 AHX11163.1 - 0.053 13.5 0.3 0.14 12.1 0.0 1.7 2 0 0 2 2 2 0 Aminoacyl tRNA synthetase class II, N-terminal domain LacAB_rpiB PF02502.18 AHX11164.1 - 1.2e-47 161.3 0.1 1.4e-47 161.2 0.1 1.0 1 0 0 1 1 1 1 Ribose/Galactose Isomerase SHMT PF00464.19 AHX11165.1 - 4.5e-168 559.0 0.0 5.3e-168 558.7 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 AHX11165.1 - 6.2e-13 48.6 0.0 8.2e-13 48.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 AHX11165.1 - 3.3e-07 29.9 0.0 2.8e-06 26.9 0.0 2.1 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 AHX11165.1 - 6.3e-05 22.5 0.1 9.1e-05 21.9 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family MCM_N PF14551.6 AHX11166.1 - 0.024 15.2 2.1 0.035 14.7 2.0 1.5 1 1 0 1 1 1 0 MCM N-terminal domain UPF0047 PF01894.17 AHX11166.1 - 0.055 13.6 0.1 0.086 13.0 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0047 Col_cuticle_N PF01484.17 AHX11166.1 - 0.15 12.1 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain TMP-TENI PF02581.17 AHX11167.1 - 1.4e-33 115.7 0.0 1.5e-33 115.6 0.0 1.0 1 0 0 1 1 1 1 Thiamine monophosphate synthase CPSase_L_D2 PF02786.17 AHX11169.1 - 6.4e-90 300.3 0.0 6.2e-58 195.8 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 AHX11169.1 - 1e-34 119.5 0.0 2.8e-34 118.1 0.0 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 AHX11169.1 - 4.6e-16 58.8 0.1 4.2e-15 55.7 0.0 2.8 2 0 0 2 2 2 1 MGS-like domain ATP-grasp PF02222.22 AHX11169.1 - 1e-11 44.7 0.0 1.8e-05 24.4 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain ATPgrasp_Ter PF15632.6 AHX11169.1 - 3.8e-11 42.8 0.0 1.3e-06 28.1 0.0 2.6 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 AHX11169.1 - 2.1e-09 37.7 1.4 4e-06 27.0 0.0 3.5 3 1 0 3 3 3 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 AHX11169.1 - 3e-07 30.2 0.0 0.001 18.7 0.0 2.5 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp_4 PF13535.6 AHX11169.1 - 3.9e-06 26.6 0.0 0.074 12.7 0.0 3.7 3 0 0 3 3 3 2 ATP-grasp domain CoA_binding_2 PF13380.6 AHX11169.1 - 0.00064 20.2 0.1 0.013 16.0 0.0 3.2 4 0 0 4 4 4 1 CoA binding domain RimK PF08443.11 AHX11169.1 - 0.024 14.2 0.0 0.21 11.2 0.0 2.5 2 1 0 2 2 2 0 RimK-like ATP-grasp domain ATP-grasp_2 PF08442.10 AHX11169.1 - 0.084 12.4 0.0 2.3 7.8 0.0 2.9 3 0 0 3 3 3 0 ATP-grasp domain PmbA_TldD PF01523.16 AHX11170.1 - 2.2e-53 181.9 0.3 3.4e-53 181.3 0.3 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Adenylsucc_synt PF00709.21 AHX11171.1 - 2.2e-150 501.3 0.0 2.4e-150 501.1 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase PgpA PF04608.13 AHX11172.1 - 2.7e-10 40.4 10.0 1.2e-09 38.3 10.0 1.9 1 1 0 1 1 1 1 Phosphatidylglycerophosphatase A RseC_MucC PF04246.12 AHX11172.1 - 0.026 14.5 2.5 0.026 14.5 2.5 2.0 3 0 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC DUF1290 PF06947.12 AHX11172.1 - 0.069 13.2 0.5 0.069 13.2 0.5 2.7 2 1 2 4 4 4 0 Protein of unknown function (DUF1290) NAD_Gly3P_dh_N PF01210.23 AHX11174.1 - 1.9e-42 144.9 0.2 5.4e-42 143.4 0.2 1.7 1 1 1 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_Gly3P_dh_C PF07479.14 AHX11174.1 - 3e-32 111.8 0.3 5.8e-32 110.9 0.3 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ApbA PF02558.16 AHX11174.1 - 2.8e-08 33.5 0.1 5.4e-08 32.6 0.1 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 AHX11174.1 - 3.4e-07 30.8 0.6 1.2e-06 29.0 0.1 2.1 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent PDH PF02153.17 AHX11174.1 - 0.0017 17.4 0.0 0.0034 16.4 0.0 1.5 1 0 0 1 1 1 1 Prephenate dehydrogenase TrkA_N PF02254.18 AHX11174.1 - 0.0018 18.5 0.5 0.012 15.8 0.0 2.5 3 1 0 3 3 3 1 TrkA-N domain NAD_binding_2 PF03446.15 AHX11174.1 - 0.0024 18.0 0.0 0.0043 17.2 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_7 PF13241.6 AHX11174.1 - 0.0057 17.1 0.0 0.055 13.9 0.0 2.4 2 1 1 3 3 3 1 Putative NAD(P)-binding Pyr_redox PF00070.27 AHX11174.1 - 0.018 15.6 0.0 0.14 12.8 0.0 2.4 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 AHX11174.1 - 0.023 14.6 0.0 0.07 13.0 0.0 2.0 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 AHX11174.1 - 0.026 14.1 0.1 0.073 12.6 0.1 1.8 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Semialdhyde_dh PF01118.24 AHX11174.1 - 0.028 14.9 0.1 0.23 11.9 0.0 2.3 1 1 1 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 AHX11174.1 - 0.034 14.4 0.1 0.29 11.4 0.0 2.5 1 1 1 2 2 2 0 Saccharopine dehydrogenase NADP binding domain HI0933_like PF03486.14 AHX11174.1 - 0.037 12.7 0.1 2 7.0 0.0 2.2 2 0 0 2 2 2 0 HI0933-like protein STAS PF01740.21 AHX11174.1 - 0.052 13.2 0.4 3.6 7.3 0.0 2.7 2 0 0 2 2 2 0 STAS domain NAD_binding_8 PF13450.6 AHX11174.1 - 0.062 13.5 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DXP_reductoisom PF02670.16 AHX11174.1 - 0.067 13.9 0.6 3.8 8.2 0.0 2.8 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase RadC PF04002.15 AHX11175.1 - 1.4e-33 115.4 0.0 2e-33 114.9 0.0 1.2 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.6 AHX11175.1 - 0.0035 17.1 0.0 0.0052 16.5 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RNase_T PF00929.24 AHX11175.1 - 0.036 14.6 0.0 0.051 14.1 0.0 1.3 1 1 0 1 1 1 0 Exonuclease HTH_19 PF12844.7 AHX11176.1 - 3.8e-08 33.2 0.0 8.7e-08 32.1 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 AHX11176.1 - 1.3e-07 31.6 0.0 3.1e-07 30.4 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 AHX11176.1 - 1e-05 25.8 0.0 1.8e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 AHX11176.1 - 0.0033 17.5 0.1 0.0065 16.6 0.0 1.5 2 0 0 2 2 2 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_38 PF13936.6 AHX11176.1 - 0.009 15.8 0.1 0.023 14.4 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AHX11176.1 - 0.015 15.1 0.0 0.28 11.0 0.0 2.4 1 1 1 2 2 2 0 Homeodomain-like domain HTH_AraC PF00165.23 AHX11176.1 - 0.045 13.9 0.1 3.9 7.7 0.0 3.3 3 0 0 3 3 3 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_26 PF13443.6 AHX11176.1 - 0.063 13.7 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain Linker_histone PF00538.19 AHX11176.1 - 0.076 13.4 0.0 0.18 12.2 0.0 1.6 2 0 0 2 2 2 0 linker histone H1 and H5 family SecA_DEAD PF07517.14 AHX11177.1 - 1.7e-128 428.0 3.5 1.7e-128 428.0 3.5 1.9 2 0 0 2 2 2 1 SecA DEAD-like domain SecA_SW PF07516.13 AHX11177.1 - 1.1e-44 152.9 8.9 1.1e-44 152.9 8.9 2.6 3 1 0 3 3 3 1 SecA Wing and Scaffold domain SecA_PP_bind PF01043.20 AHX11177.1 - 1.6e-38 131.7 0.4 1.6e-38 131.7 0.4 2.6 3 0 0 3 3 3 1 SecA preprotein cross-linking domain DEAD PF00270.29 AHX11177.1 - 2.2e-07 30.8 0.3 1.9e-06 27.8 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 AHX11177.1 - 0.0077 16.6 2.1 0.044 14.1 0.2 3.3 3 1 0 3 3 3 1 Helicase conserved C-terminal domain YchF-GTPase_C PF06071.13 AHX11177.1 - 0.039 14.1 0.2 0.2 11.9 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF933) Response_reg PF00072.24 AHX11178.1 - 1.6e-20 73.4 0.0 2.9e-20 72.5 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AHX11178.1 - 2.3e-15 56.4 0.0 4.3e-15 55.5 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal AIRC PF00731.20 AHX11179.1 - 1.3e-58 196.7 0.2 1.5e-58 196.6 0.2 1.0 1 0 0 1 1 1 1 AIR carboxylase Peptidase_M22 PF00814.25 AHX11180.1 - 2.5e-83 279.9 0.0 2.9e-83 279.7 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 AHX11180.1 - 0.00014 21.6 0.0 0.00021 21.1 0.0 1.4 1 0 0 1 1 1 1 Carbamoyltransferase N-terminus DUF2066 PF09839.9 AHX11180.1 - 0.14 11.5 0.0 0.52 9.7 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2066) NMT1_3 PF16868.5 AHX11181.1 - 4e-87 292.3 0.0 4.6e-87 292.1 0.0 1.0 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 AHX11181.1 - 3.2e-05 24.0 0.0 5.5e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 NMT1/THI5 like Mur_ligase_M PF08245.12 AHX11183.1 - 1.4e-18 67.6 0.3 3.4e-18 66.3 0.3 1.7 1 1 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 AHX11183.1 - 7.9e-06 26.0 0.0 2.4e-05 24.5 0.0 1.8 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain PglD_N PF17836.1 AHX11183.1 - 0.038 14.6 0.1 1.1 9.9 0.0 2.9 3 0 0 3 3 3 0 PglD N-terminal domain polyprenyl_synt PF00348.17 AHX11184.1 - 6.7e-54 182.6 0.7 8.4e-54 182.3 0.7 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase HEPPP_synt_1 PF07307.11 AHX11184.1 - 0.016 14.8 0.3 0.032 13.8 0.3 1.5 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 TauE PF01925.19 AHX11185.1 - 1.4e-38 132.8 32.2 1.8e-38 132.5 32.2 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE FtsH_ext PF06480.15 AHX11185.1 - 8 6.9 6.5 3.9 7.9 0.2 2.6 2 0 0 2 2 2 0 FtsH Extracellular Alph_Pro_TM PF09608.10 AHX11186.1 - 8.5e-60 202.4 0.1 1.5e-59 201.6 0.1 1.4 1 1 0 1 1 1 1 Putative transmembrane protein (Alph_Pro_TM) Porin_4 PF13609.6 AHX11188.1 - 1.4e-10 41.4 1.6 2.9e-10 40.4 0.7 1.8 1 1 1 2 2 2 1 Gram-negative porin Mur_ligase_M PF08245.12 AHX11190.1 - 1.4e-37 129.5 0.0 2.5e-37 128.7 0.0 1.4 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 AHX11190.1 - 2.2e-21 75.9 0.0 4.7e-20 71.6 0.0 2.8 3 0 0 3 3 3 1 Mur ligase family, glutamate ligase domain Metallophos_2 PF12850.7 AHX11190.1 - 0.11 12.7 0.3 0.69 10.1 0.1 2.2 1 1 1 2 2 2 0 Calcineurin-like phosphoesterase superfamily domain Mur_ligase PF01225.25 AHX11190.1 - 0.14 12.5 0.0 0.51 10.7 0.0 2.0 1 0 0 1 1 1 0 Mur ligase family, catalytic domain HhH-GPD PF00730.25 AHX11191.1 - 5.5e-19 68.6 0.0 9e-19 67.9 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 AHX11191.1 - 4.7e-07 29.3 0.0 1.4e-06 27.9 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 AHX11191.1 - 0.00062 20.3 0.2 0.032 14.8 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain IL11 PF07400.11 AHX11191.1 - 0.025 14.2 0.0 0.098 12.3 0.0 1.9 2 0 0 2 2 2 0 Interleukin 11 EndIII_4Fe-2S PF10576.9 AHX11191.1 - 0.048 14.0 4.3 0.079 13.3 4.3 1.4 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III BTD PF09270.10 AHX11191.1 - 0.062 13.5 0.1 0.092 13.0 0.1 1.3 1 0 0 1 1 1 0 Beta-trefoil DNA-binding domain DUF2400 PF09674.10 AHX11191.1 - 0.1 12.6 0.1 0.37 10.7 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) LysR_substrate PF03466.20 AHX11191.1 - 0.16 11.3 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 LysR substrate binding domain CDP-OH_P_transf PF01066.21 AHX11192.1 - 1.2e-13 51.6 1.0 1.2e-13 51.6 1.0 3.2 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase CDP-OH_P_tran_2 PF08009.11 AHX11192.1 - 7.1e-10 38.6 6.9 7.1e-10 38.6 6.9 3.3 4 0 0 4 4 4 1 CDP-alcohol phosphatidyltransferase 2 PS_Dcarbxylase PF02666.15 AHX11193.1 - 3.8e-31 108.2 0.5 3.1e-30 105.2 0.5 1.9 1 1 0 1 1 1 1 Phosphatidylserine decarboxylase LSDAT_prok PF18171.1 AHX11193.1 - 0.027 13.7 0.0 0.038 13.2 0.0 1.3 1 0 0 1 1 1 0 SLOG in TRPM, prokaryote UPF0054 PF02130.17 AHX11194.1 - 5.6e-34 116.7 0.6 6.4e-34 116.5 0.6 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0054 DUF3152 PF11350.8 AHX11194.1 - 0.03 14.0 0.0 0.034 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3152) Peptidase_M10 PF00413.24 AHX11194.1 - 0.12 12.2 1.2 0.18 11.6 1.1 1.4 1 1 0 1 1 1 0 Matrixin CoA_binding PF02629.19 AHX11195.1 - 9e-32 109.6 0.7 9e-32 109.6 0.7 2.2 2 1 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 AHX11195.1 - 7.8e-21 74.5 0.9 1.2e-20 73.8 0.9 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 AHX11195.1 - 1.1e-11 44.7 0.3 1.1e-11 44.7 0.3 1.5 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain ATP-grasp_2 PF08442.10 AHX11196.1 - 4.5e-75 251.7 0.6 1.1e-74 250.3 0.3 1.7 2 0 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 AHX11196.1 - 2.5e-22 79.3 1.3 4.9e-22 78.4 1.3 1.5 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 AHX11196.1 - 1.1e-08 34.8 0.2 3e-08 33.4 0.1 1.7 2 0 0 2 2 2 1 ATP-grasp domain DUF1983 PF09327.11 AHX11196.1 - 0.086 12.9 1.4 0.84 9.8 0.2 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1983) TIM PF00121.18 AHX11198.1 - 2.9e-62 210.2 0.0 3.6e-62 209.9 0.0 1.1 1 0 0 1 1 1 1 Triosephosphate isomerase UPF0176_N PF17773.1 AHX11199.1 - 4.7e-26 91.0 0.0 8.8e-26 90.1 0.0 1.5 1 0 0 1 1 1 1 UPF0176 acylphosphatase like domain Rhodanese PF00581.20 AHX11199.1 - 3.5e-07 30.7 0.0 8.4e-07 29.5 0.0 1.6 1 0 0 1 1 1 1 Rhodanese-like domain Rhodanese_C PF12368.8 AHX11199.1 - 1.3e-05 25.5 1.7 3.3e-05 24.2 1.7 1.7 1 0 0 1 1 1 1 Rhodanase C-terminal DUF3867 PF12983.7 AHX11199.1 - 0.079 13.0 1.0 0.17 11.9 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3867) Lsr2 PF11774.8 AHX11199.1 - 0.14 12.3 0.0 0.26 11.5 0.0 1.4 1 0 0 1 1 1 0 Lsr2 Amidase PF01425.21 AHX11200.1 - 6.5e-141 470.4 0.0 7.3e-141 470.2 0.0 1.0 1 0 0 1 1 1 1 Amidase Ribosomal_L33 PF00471.20 AHX11201.1 - 1.6e-11 44.4 0.5 2e-11 44.2 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L33 CtaG_Cox11 PF04442.14 AHX11202.1 - 1.3e-53 181.1 0.8 1.5e-53 180.9 0.8 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 Bac_DnaA PF00308.18 AHX11204.1 - 2.4e-83 279.3 0.3 4e-83 278.6 0.3 1.4 1 0 0 1 1 1 1 Bacterial dnaA protein Bac_DnaA_C PF08299.11 AHX11204.1 - 7.9e-27 93.1 0.4 2.4e-26 91.6 0.1 2.0 2 0 0 2 2 2 1 Bacterial dnaA protein helix-turn-helix DnaA_N PF11638.8 AHX11204.1 - 1.1e-16 60.3 0.6 3.5e-16 58.7 0.6 1.9 1 0 0 1 1 1 1 DnaA N-terminal domain IstB_IS21 PF01695.17 AHX11204.1 - 6.1e-08 32.6 0.0 1.3e-07 31.5 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 AHX11204.1 - 8.8e-07 29.4 0.5 3.9e-06 27.3 0.0 2.2 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AFG1_ATPase PF03969.16 AHX11204.1 - 1.4e-05 24.2 2.1 0.03 13.2 0.5 2.3 1 1 1 2 2 2 2 AFG1-like ATPase ATPase_2 PF01637.18 AHX11204.1 - 0.00041 20.3 0.2 0.0013 18.7 0.2 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 AHX11204.1 - 0.0069 16.8 0.3 0.07 13.5 0.5 2.5 2 1 0 2 2 2 1 RNA helicase ResIII PF04851.15 AHX11204.1 - 0.021 14.8 0.0 0.043 13.8 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 AHX11204.1 - 0.028 14.8 0.1 0.22 11.8 0.0 2.2 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.6 AHX11204.1 - 0.051 13.9 0.3 4.2 7.6 0.0 2.5 1 1 1 2 2 2 0 AAA domain DUF5616 PF18481.1 AHX11204.1 - 0.062 13.6 1.4 0.13 12.6 0.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF5616) NACHT PF05729.12 AHX11204.1 - 0.081 12.8 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 NACHT domain Semialdhyde_dhC PF02774.18 AHX11205.1 - 5.4e-42 143.9 0.0 6.9e-42 143.6 0.0 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 AHX11205.1 - 6.9e-23 81.4 0.0 1.1e-22 80.7 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_C PF02800.20 AHX11205.1 - 0.00026 20.6 0.2 0.00058 19.5 0.0 1.6 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NmrA PF05368.13 AHX11205.1 - 0.062 12.8 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 NmrA-like family Epimerase PF01370.21 AHX11205.1 - 0.1 12.0 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family DapB_N PF01113.20 AHX11205.1 - 0.15 12.2 0.3 0.42 10.7 0.1 1.9 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus MgtE PF01769.16 AHX11206.1 - 0.11 12.8 2.4 2.4 8.5 0.6 2.1 1 1 1 2 2 2 0 Divalent cation transporter SpoU_methylase PF00588.19 AHX11208.1 - 1.2e-32 113.0 0.0 1.8e-32 112.5 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 AHX11208.1 - 1.8e-06 28.1 0.0 2.9e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding Methyltrn_RNA_4 PF09936.9 AHX11208.1 - 0.14 12.0 0.0 0.67 9.8 0.0 1.9 2 0 0 2 2 2 0 SAM-dependent RNA methyltransferase Ribosomal_S10 PF00338.22 AHX11209.1 - 9.5e-30 102.7 0.0 1.1e-29 102.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e Ribosomal_L3 PF00297.22 AHX11210.1 - 5.3e-15 55.3 3.6 1e-12 47.8 1.3 2.1 1 1 1 2 2 2 2 Ribosomal protein L3 Ribosomal_L4 PF00573.22 AHX11211.1 - 3.2e-57 193.3 0.1 3.5e-57 193.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.20 AHX11212.1 - 5.9e-13 49.0 0.0 6.9e-13 48.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L2_C PF03947.18 AHX11213.1 - 1.8e-54 183.3 2.4 3.2e-54 182.5 2.4 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 AHX11213.1 - 4.8e-26 90.5 0.4 4e-24 84.4 0.3 2.6 2 1 1 3 3 3 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.21 AHX11214.1 - 7.3e-27 93.1 0.4 8.3e-27 92.9 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S19 Ribosomal_L22 PF00237.19 AHX11215.1 - 8.2e-25 87.0 0.4 9e-25 86.9 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.20 AHX11216.1 - 3.2e-36 123.7 0.3 5.1e-36 123.1 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 AHX11216.1 - 2.3e-10 40.1 0.0 5.9e-10 38.8 0.0 1.7 1 0 0 1 1 1 1 KH domain Ribosomal_L16 PF00252.18 AHX11217.1 - 6.8e-36 123.2 0.0 7.6e-36 123.0 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Ribosomal_L29 PF00831.23 AHX11218.1 - 4.7e-13 48.9 0.0 5.5e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein Orthopox_A5L PF06193.11 AHX11218.1 - 0.09 12.2 0.0 0.093 12.2 0.0 1.0 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like Ribosomal_L14 PF00238.19 AHX11219.1 - 6.1e-37 126.4 1.8 6.8e-37 126.3 1.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e DUF2464 PF10240.9 AHX11219.1 - 0.14 11.7 0.1 0.14 11.7 0.1 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 ribosomal_L24 PF17136.4 AHX11220.1 - 2.6e-08 34.1 0.1 4e-08 33.5 0.1 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 AHX11220.1 - 0.00015 21.6 1.4 0.00027 20.8 1.2 1.6 1 1 0 1 1 1 1 KOW motif ATP-synt_ab PF00006.25 AHX11220.1 - 0.088 12.5 0.3 0.086 12.5 0.3 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Ribosomal_L5_C PF00673.21 AHX11221.1 - 2e-32 111.2 0.0 3.1e-32 110.6 0.0 1.3 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 AHX11221.1 - 3.4e-21 75.3 0.0 5.9e-21 74.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 AHX11222.1 - 5.6e-26 90.1 0.5 5.6e-26 90.1 0.5 1.9 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e Ribosomal_S8 PF00410.19 AHX11223.1 - 4.6e-35 120.4 0.0 5.1e-35 120.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.23 AHX11224.1 - 5.1e-07 30.3 0.0 4.3e-06 27.3 0.0 2.0 2 0 0 2 2 2 1 Ribosomal protein L6 Ribosomal_L18p PF00861.22 AHX11225.1 - 1.6e-16 60.7 0.0 2e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_S5_C PF03719.15 AHX11226.1 - 2.6e-21 74.8 0.0 3.9e-21 74.3 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_S5 PF00333.20 AHX11226.1 - 1.7e-20 72.7 1.5 3.2e-20 71.9 1.5 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_L27A PF00828.19 AHX11227.1 - 0.13 12.9 0.0 0.14 12.8 0.0 1.0 1 0 0 1 1 1 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SecY PF00344.20 AHX11228.1 - 2.7e-83 279.8 19.4 2.7e-83 279.8 19.4 1.9 2 0 0 2 2 2 1 SecY translocase ADK PF00406.22 AHX11229.1 - 4.1e-27 95.1 0.0 5.3e-27 94.8 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 AHX11229.1 - 1.4e-12 48.2 0.0 2.6e-12 47.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AHX11229.1 - 1.3e-05 25.4 0.0 1.9e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain Rubredoxin_2 PF18073.1 AHX11229.1 - 0.00044 19.9 1.5 0.0012 18.5 1.5 1.7 1 0 0 1 1 1 1 Rubredoxin metal binding domain ADK_lid PF05191.14 AHX11229.1 - 0.037 14.0 2.1 0.092 12.7 2.1 1.7 1 1 0 1 1 1 0 Adenylate kinase, active site lid AAA_18 PF13238.6 AHX11229.1 - 0.074 13.6 0.0 0.14 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 AHX11229.1 - 0.099 12.4 0.1 0.22 11.2 0.0 1.7 2 0 0 2 2 2 0 Cytidylate kinase zf-ACC PF17848.1 AHX11229.1 - 0.13 12.3 1.1 1.8 8.7 0.0 2.6 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Ribosomal_S13 PF00416.22 AHX11230.1 - 4.5e-27 95.0 0.4 6.2e-25 88.1 0.4 2.0 1 1 0 1 1 1 1 Ribosomal protein S13/S18 RNA_pol_A_CTD PF03118.15 AHX11231.1 - 2e-21 75.5 1.3 3.4e-21 74.8 1.3 1.3 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain RNA_pol_L PF01193.24 AHX11231.1 - 1.4e-18 66.1 0.0 2.1e-18 65.5 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_A_bac PF01000.26 AHX11231.1 - 9.3e-17 61.4 0.0 2e-16 60.3 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain HHH_5 PF14520.6 AHX11231.1 - 0.36 11.5 1.6 1.7 9.3 0.0 2.9 4 0 0 4 4 4 0 Helix-hairpin-helix domain Ribosomal_L17 PF01196.19 AHX11232.1 - 1.4e-30 106.0 0.0 1.7e-30 105.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L17 MerR_1 PF13411.6 AHX11233.1 - 3.7e-21 75.0 0.9 5e-21 74.6 0.2 1.5 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 AHX11233.1 - 5e-05 23.0 0.0 9.4e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein Methyltrn_RNA_4 PF09936.9 AHX11233.1 - 0.027 14.3 0.1 0.033 14.1 0.1 1.1 1 0 0 1 1 1 0 SAM-dependent RNA methyltransferase ImpA_N PF06812.12 AHX11233.1 - 0.03 14.4 0.1 7.6 6.7 0.0 2.1 1 1 1 2 2 2 0 ImpA, N-terminal, type VI secretion system Ribonuc_2-5A PF06479.12 AHX11233.1 - 0.058 13.6 0.2 0.46 10.7 0.0 2.0 1 1 1 2 2 2 0 Ribonuclease 2-5A Ribosomal_L22 PF00237.19 AHX11233.1 - 0.08 13.2 0.2 0.12 12.6 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L22p/L17e PgpA PF04608.13 AHX11234.1 - 9.5e-39 132.7 6.7 1.1e-38 132.5 6.7 1.0 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A IF3_C PF00707.22 AHX11235.1 - 3.9e-24 84.4 0.5 7.6e-24 83.5 0.5 1.5 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain IF3_N PF05198.16 AHX11235.1 - 4.4e-22 78.1 0.9 9.6e-22 77.0 0.9 1.6 1 0 0 1 1 1 1 Translation initiation factor IF-3, N-terminal domain PPI_Ypi1 PF07491.11 AHX11235.1 - 0.1 12.4 1.2 0.16 11.8 0.1 1.9 2 0 0 2 2 2 0 Protein phosphatase inhibitor tRNA-synt_2b PF00587.25 AHX11236.1 - 1.3e-41 142.5 0.0 2.6e-41 141.6 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 AHX11236.1 - 8.6e-13 48.3 0.5 2e-12 47.1 0.2 1.8 2 0 0 2 2 2 1 Anticodon binding domain tRNA_SAD PF07973.14 AHX11236.1 - 2.2e-12 46.9 0.0 4.4e-12 45.9 0.0 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain PPV_E1_C PF00519.17 AHX11236.1 - 0.12 11.2 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Papillomavirus helicase Fer2 PF00111.27 AHX11238.1 - 4.9e-13 48.8 0.2 5.9e-13 48.6 0.2 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain MCR PF18509.1 AHX11238.1 - 0.066 12.8 0.2 0.12 11.9 0.2 1.4 1 0 0 1 1 1 0 Magnetochrome domain HSP70 PF00012.20 AHX11239.1 - 4.2e-140 467.8 2.2 6.7e-140 467.1 2.2 1.3 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 AHX11239.1 - 6.3e-18 64.7 0.9 2.2e-14 53.0 0.0 3.1 3 1 1 4 4 4 2 MreB/Mbl protein BcrAD_BadFG PF01869.20 AHX11239.1 - 0.004 16.7 0.1 0.69 9.3 0.0 2.3 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family SLBP_RNA_bind PF15247.6 AHX11239.1 - 0.11 12.6 0.1 0.33 11.1 0.1 1.7 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain UL16 PF17622.2 AHX11239.1 - 0.16 11.6 0.0 0.29 10.8 0.0 1.3 1 0 0 1 1 1 0 Viral unique long protein 16 DnaJ PF00226.31 AHX11240.1 - 3.6e-05 23.8 0.3 8e-05 22.7 0.3 1.6 1 0 0 1 1 1 1 DnaJ domain HSCB_C PF07743.13 AHX11240.1 - 0.0013 19.2 3.5 0.0013 19.2 3.5 2.0 2 1 0 2 2 2 1 HSCB C-terminal oligomerisation domain Endonuc-PvuII PF09225.10 AHX11240.1 - 0.12 12.1 0.9 1.1 9.0 0.1 2.2 2 0 0 2 2 2 0 Restriction endonuclease PvuII COX16 PF14138.6 AHX11240.1 - 2.6 8.6 5.0 13 6.3 0.3 2.7 3 0 0 3 3 3 0 Cytochrome c oxidase assembly protein COX16 Fe-S_biosyn PF01521.20 AHX11241.1 - 3.2e-11 43.4 0.0 4.2e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis DUF1573 PF07610.11 AHX11241.1 - 0.52 10.4 2.5 1.1 9.3 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1573) NifU_N PF01592.16 AHX11242.1 - 7.1e-55 184.6 0.3 8.1e-55 184.4 0.3 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain Aminotran_5 PF00266.19 AHX11243.1 - 3e-83 279.8 0.0 3.8e-83 279.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 AHX11243.1 - 1e-06 28.3 0.0 1.1e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 AHX11243.1 - 0.0019 17.6 1.0 0.003 16.9 1.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pyridoxal_deC PF00282.19 AHX11243.1 - 0.0057 15.4 0.1 0.0088 14.8 0.1 1.4 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 AHX11244.1 - 4.9e-50 170.5 2.2 6e-50 170.2 2.2 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Rrf2 PF02082.20 AHX11244.1 - 2.6e-20 72.6 0.1 8.6e-20 70.9 0.1 2.0 1 0 0 1 1 1 1 Transcriptional regulator Beta_elim_lyase PF01212.21 AHX11244.1 - 4.9e-05 22.7 0.1 7.7e-05 22.1 0.1 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 AHX11244.1 - 0.00089 18.7 0.0 0.0014 18.0 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family HrcA_DNA-bdg PF03444.15 AHX11244.1 - 0.00097 18.7 0.0 0.0022 17.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Pyridoxal_deC PF00282.19 AHX11244.1 - 0.0089 14.8 0.0 0.015 14.0 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain BPD_transp_1 PF00528.22 AHX11246.1 - 1.9e-05 24.5 46.9 0.00025 20.8 15.4 3.6 2 2 2 4 4 4 2 Binding-protein-dependent transport system inner membrane component Chordopox_A13L PF05961.11 AHX11246.1 - 0.039 14.2 0.1 0.097 12.9 0.1 1.6 1 0 0 1 1 1 0 Chordopoxvirus A13L protein DUF3951 PF13131.6 AHX11246.1 - 0.41 10.9 0.1 0.41 10.9 0.1 4.4 5 0 0 5 5 5 0 Protein of unknown function (DUF3951) Ribosomal_TL5_C PF14693.6 AHX11247.1 - 1.7e-21 76.4 0.3 3.3e-21 75.4 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein TL5, C-terminal domain Ribosomal_L25p PF01386.19 AHX11247.1 - 2.2e-19 69.7 0.0 6.5e-19 68.2 0.0 1.8 2 0 0 2 2 2 1 Ribosomal L25p family Pept_tRNA_hydro PF01195.19 AHX11248.1 - 1.1e-35 123.1 0.0 1.2e-35 123.0 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase R-HINP1I PF11463.8 AHX11248.1 - 0.041 13.3 0.1 0.78 9.1 0.0 2.0 2 0 0 2 2 2 0 R.HinP1I restriction endonuclease GshA PF08886.11 AHX11249.1 - 3.3e-105 351.9 2.7 4.6e-105 351.5 2.7 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase CoaE PF01121.20 AHX11250.1 - 3.1e-25 88.9 0.3 3.6e-25 88.7 0.3 1.1 1 0 0 1 1 1 1 Dephospho-CoA kinase AAA_18 PF13238.6 AHX11250.1 - 6.4e-05 23.5 0.2 0.00012 22.6 0.2 1.4 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 AHX11250.1 - 0.0066 16.3 0.1 0.053 13.4 0.0 2.1 2 0 0 2 2 2 1 Deoxynucleoside kinase Endotoxin_C2 PF18449.1 AHX11250.1 - 0.023 15.0 0.1 26 5.3 0.0 3.2 3 0 0 3 3 3 0 Delta endotoxin NAD_kinase PF01513.21 AHX11251.1 - 1.2e-25 90.3 0.1 1.7e-25 89.8 0.1 1.1 1 0 0 1 1 1 1 ATP-NAD kinase Glutaredoxin PF00462.24 AHX11252.1 - 5.8e-05 23.2 0.0 7.4e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin HIG_1_N PF04588.13 AHX11253.1 - 1.6e-06 28.2 1.6 2e-06 27.9 1.6 1.2 1 0 0 1 1 1 1 Hypoxia induced protein conserved region Sigma70_r3 PF04539.16 AHX11254.1 - 5.3e-22 77.7 0.6 7e-21 74.1 0.0 2.9 2 0 0 2 2 2 1 Sigma-70 region 3 Sigma70_r2 PF04542.14 AHX11254.1 - 2.2e-20 72.2 0.0 6e-20 70.8 0.0 1.8 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 AHX11254.1 - 7.7e-16 57.4 0.1 8.7e-12 44.4 0.0 3.3 2 1 0 2 2 2 2 Sigma-70, region 4 Sigma70_ner PF04546.13 AHX11254.1 - 2.4e-15 57.0 4.7 2.4e-15 57.0 4.7 2.4 2 0 0 2 2 2 1 Sigma-70, non-essential region Sigma70_r1_1 PF03979.14 AHX11254.1 - 3.5e-14 52.6 5.8 1.4e-13 50.6 5.8 2.1 1 0 0 1 1 1 1 Sigma-70 factor, region 1.1 Sigma70_r1_2 PF00140.20 AHX11254.1 - 7.4e-10 38.7 0.9 7.4e-10 38.7 0.9 2.9 3 0 0 3 3 3 1 Sigma-70 factor, region 1.2 Sigma70_r4_2 PF08281.12 AHX11254.1 - 0.00032 20.3 1.3 0.48 10.1 0.0 3.7 3 0 0 3 3 3 2 Sigma-70, region 4 HTH_41 PF14502.6 AHX11254.1 - 0.00041 20.0 0.2 0.063 13.0 0.0 3.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_15 PF12324.8 AHX11254.1 - 0.0023 17.9 0.0 1.3 9.1 0.0 3.4 3 0 0 3 3 3 1 Helix-turn-helix domain of alkylmercury lyase GntR PF00392.21 AHX11254.1 - 0.0065 16.1 0.8 6.6 6.5 0.0 4.1 5 0 0 5 5 5 1 Bacterial regulatory proteins, gntR family TnsD PF15978.5 AHX11254.1 - 0.014 14.4 0.1 0.037 13.0 0.1 1.8 1 1 0 1 1 1 0 Tn7-like transposition protein D AAA_2 PF07724.14 AHX11255.1 - 1.1e-42 146.0 0.1 4.7e-41 140.8 0.0 3.0 3 0 0 3 3 3 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 AHX11255.1 - 7.6e-25 87.9 0.0 8.4e-12 45.7 0.0 2.9 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_9 PF17871.1 AHX11255.1 - 1.5e-20 73.0 0.4 4.2e-20 71.6 0.4 1.9 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 AHX11255.1 - 2.5e-13 50.2 0.0 1.3e-08 34.9 0.0 2.9 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 AHX11255.1 - 2.1e-11 43.8 0.1 9.3e-08 31.9 0.1 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain Clp_N PF02861.20 AHX11255.1 - 7e-10 38.9 3.8 2e-09 37.5 0.8 3.0 3 0 0 3 3 2 1 Clp amino terminal domain, pathogenicity island component AAA_14 PF13173.6 AHX11255.1 - 7.6e-08 32.5 0.1 0.0093 16.0 0.0 3.4 3 0 0 3 3 3 2 AAA domain AAA_22 PF13401.6 AHX11255.1 - 3.3e-07 30.6 0.2 0.053 13.8 0.0 4.1 2 2 0 2 2 2 2 AAA domain AAA_16 PF13191.6 AHX11255.1 - 5.1e-07 30.2 0.2 0.12 12.7 0.0 3.5 2 2 1 4 4 3 2 AAA ATPase domain TniB PF05621.11 AHX11255.1 - 8e-07 28.6 0.0 0.00038 19.9 0.0 3.6 3 1 0 3 3 3 1 Bacterial TniB protein AAA_3 PF07726.11 AHX11255.1 - 3.1e-06 27.1 0.0 6e-05 22.9 0.0 3.0 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 AHX11255.1 - 1.3e-05 25.2 0.3 5.6e-05 23.1 0.3 2.2 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein NACHT PF05729.12 AHX11255.1 - 1.9e-05 24.7 0.0 0.15 12.0 0.0 3.1 3 0 0 3 3 2 2 NACHT domain AAA_7 PF12775.7 AHX11255.1 - 2.6e-05 23.8 0.1 0.11 12.1 0.0 3.1 2 2 0 2 2 2 2 P-loop containing dynein motor region RNA_helicase PF00910.22 AHX11255.1 - 5.6e-05 23.5 0.4 0.12 12.8 0.5 3.5 2 1 0 2 2 2 1 RNA helicase ATPase_2 PF01637.18 AHX11255.1 - 8.2e-05 22.6 12.2 0.032 14.2 0.2 5.2 4 1 1 5 5 5 1 ATPase domain predominantly from Archaea Mg_chelatase PF01078.21 AHX11255.1 - 0.00014 21.3 0.2 7.7 5.8 0.0 3.9 3 1 1 4 4 4 0 Magnesium chelatase, subunit ChlI Torsin PF06309.11 AHX11255.1 - 0.00031 20.9 0.0 0.0012 18.9 0.0 2.0 1 0 0 1 1 1 1 Torsin RuvB_N PF05496.12 AHX11255.1 - 0.00067 19.4 0.2 2.5 7.8 0.0 4.1 4 0 0 4 4 4 1 Holliday junction DNA helicase RuvB P-loop domain Zeta_toxin PF06414.12 AHX11255.1 - 0.00069 19.0 0.0 0.034 13.4 0.0 2.9 3 0 0 3 3 2 1 Zeta toxin TsaE PF02367.17 AHX11255.1 - 0.00088 19.3 0.0 0.3 11.1 0.0 2.9 3 0 0 3 3 3 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 AHX11255.1 - 0.00089 19.0 0.0 2.3 7.9 0.0 3.0 3 0 0 3 3 2 2 IstB-like ATP binding protein DNA_pol3_delta2 PF13177.6 AHX11255.1 - 0.0016 18.2 0.2 0.056 13.2 0.0 2.7 2 0 0 2 2 2 1 DNA polymerase III, delta subunit AAA_33 PF13671.6 AHX11255.1 - 0.0022 18.1 0.0 0.36 11.0 0.0 2.8 3 0 0 3 3 2 1 AAA domain AAA_6 PF12774.7 AHX11255.1 - 0.0085 15.1 0.0 0.02 13.9 0.0 1.6 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region NB-ARC PF00931.22 AHX11255.1 - 0.028 13.6 0.4 5.7 6.0 0.2 3.0 2 1 0 2 2 2 0 NB-ARC domain ResIII PF04851.15 AHX11255.1 - 0.034 14.2 0.2 1.1 9.3 0.0 3.1 4 0 0 4 4 3 0 Type III restriction enzyme, res subunit Roc PF08477.13 AHX11255.1 - 0.056 13.7 0.0 5.1 7.3 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase RsgA_GTPase PF03193.16 AHX11255.1 - 0.059 13.3 0.0 12 5.8 0.0 2.7 2 0 0 2 2 2 0 RsgA GTPase NTPase_1 PF03266.15 AHX11255.1 - 0.062 13.2 0.9 12 5.7 0.0 2.9 3 0 0 3 3 3 0 NTPase AAA_18 PF13238.6 AHX11255.1 - 0.075 13.6 0.0 20 5.7 0.0 3.3 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 AHX11255.1 - 0.22 11.1 0.1 5.6 6.5 0.0 2.9 2 1 1 3 3 3 0 AAA domain PP1_inhibitor PF05361.12 AHX11255.1 - 7.9 6.5 8.5 0.52 10.3 0.3 3.1 4 0 0 4 4 3 0 PKC-activated protein phosphatase-1 inhibitor ABC_tran PF00005.27 AHX11258.1 - 4.7e-30 104.9 0.1 7e-30 104.3 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AHX11258.1 - 3.1e-08 33.8 0.2 0.00055 19.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 AHX11258.1 - 1.5e-06 28.2 0.0 0.022 14.5 0.0 2.1 1 1 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 AHX11258.1 - 7.3e-05 22.3 0.2 0.00066 19.2 0.0 1.9 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AHX11258.1 - 0.00019 21.7 0.3 0.0029 17.9 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AHX11258.1 - 0.0004 20.8 0.2 0.00082 19.8 0.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 AHX11258.1 - 0.0028 17.2 0.5 0.06 12.9 0.2 2.2 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 AHX11258.1 - 0.016 15.0 0.1 3.6 7.3 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.6 AHX11258.1 - 0.019 14.7 0.2 0.21 11.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 AHX11258.1 - 0.027 14.4 0.1 0.064 13.2 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase SRP54 PF00448.22 AHX11258.1 - 0.042 13.5 0.1 0.088 12.4 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_13 PF13166.6 AHX11258.1 - 0.07 11.8 0.0 0.11 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 AHX11258.1 - 0.098 12.8 0.5 0.3 11.2 0.5 1.9 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 AHX11258.1 - 0.12 12.4 0.0 0.29 11.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 AHX11258.1 - 0.14 11.8 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AHX11258.1 - 0.15 12.4 0.0 1.9 8.8 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit CbiA PF01656.23 AHX11258.1 - 0.15 12.1 0.1 0.22 11.6 0.1 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Competence PF03772.16 AHX11261.1 - 3.5e-51 174.1 10.2 4.4e-51 173.7 10.2 1.1 1 0 0 1 1 1 1 Competence protein DUF4131 PF13567.6 AHX11261.1 - 0.004 16.8 0.0 0.004 16.8 0.0 3.1 2 1 0 2 2 2 1 Domain of unknown function (DUF4131) DUF4467 PF14729.6 AHX11261.1 - 0.036 14.4 0.3 0.15 12.4 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function with cystatin-like fold (DUF4467) DUF2847 PF11009.8 AHX11262.1 - 0.12 12.3 0.0 0.15 12.0 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2847) GCV_T PF01571.21 AHX11263.1 - 4.1e-06 26.4 0.0 5e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain YajC PF02699.15 AHX11264.1 - 8.6e-26 89.6 1.8 9.4e-26 89.5 1.8 1.0 1 0 0 1 1 1 1 Preprotein translocase subunit FixQ PF05545.11 AHX11264.1 - 0.14 12.2 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ CusF_Ec PF11604.8 AHX11264.1 - 0.16 12.0 0.7 3.9 7.5 0.2 2.2 2 0 0 2 2 2 0 Copper binding periplasmic protein CusF PdxJ PF03740.13 AHX11265.1 - 2.5e-66 223.1 0.1 2.8e-66 223.0 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthesis protein PdxJ Radical_SAM PF04055.21 AHX11267.1 - 1.6e-10 41.6 0.1 4.6e-10 40.1 0.1 1.7 2 0 0 2 2 2 1 Radical SAM superfamily His_biosynth PF00977.21 AHX11267.1 - 0.031 13.7 0.0 0.045 13.2 0.0 1.2 1 0 0 1 1 1 0 Histidine biosynthesis protein Polyketide_cyc PF03364.20 AHX11268.1 - 1.1e-18 67.6 0.0 1.3e-18 67.4 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 AHX11268.1 - 0.00023 21.5 0.0 0.0003 21.1 0.0 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport COXG PF06240.13 AHX11268.1 - 0.0074 16.0 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) Kinase-PPPase PF03618.14 AHX11269.1 - 3.5e-80 269.5 0.0 4e-80 269.3 0.0 1.0 1 0 0 1 1 1 1 Kinase/pyrophosphorylase CorC_HlyC PF03471.17 AHX11270.1 - 5.7e-14 51.9 0.0 1.4e-13 50.6 0.0 1.7 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 AHX11270.1 - 3e-10 40.4 4.9 1.2e-07 32.0 0.5 2.9 2 1 0 2 2 2 2 CBS domain Fer4 PF00037.27 AHX11272.1 - 8.7e-09 34.8 26.1 7.8e-07 28.7 8.6 3.2 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 AHX11272.1 - 1.8e-07 30.9 16.5 0.00051 20.0 4.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 AHX11272.1 - 2.2e-07 31.7 8.1 0.00034 21.5 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 AHX11272.1 - 5.3e-07 29.7 25.0 0.00019 21.5 1.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 AHX11272.1 - 2.1e-06 27.7 13.7 0.00098 19.2 0.7 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 AHX11272.1 - 8e-06 25.7 21.3 0.00074 19.5 6.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 AHX11272.1 - 8.6e-06 26.3 16.2 5.6e-05 23.6 16.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 AHX11272.1 - 2e-05 24.7 13.3 4.4e-05 23.6 13.4 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 AHX11272.1 - 8.5e-05 22.8 13.2 0.001 19.4 0.6 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain DUF3470 PF11953.8 AHX11272.1 - 9.8e-05 22.2 0.0 0.00016 21.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3470) Fer4_17 PF13534.6 AHX11272.1 - 0.00011 22.7 6.9 0.003 18.0 0.1 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 AHX11272.1 - 0.00047 20.6 8.7 0.0048 17.3 0.0 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_11 PF13247.6 AHX11272.1 - 0.33 11.1 11.1 0.92 9.7 10.6 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 AHX11272.1 - 0.34 11.5 15.5 0.42 11.2 4.3 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Thioredoxin_9 PF14595.6 AHX11272.1 - 0.58 9.9 3.2 4.1 7.2 0.0 2.2 2 0 0 2 2 2 0 Thioredoxin Fer4_15 PF13459.6 AHX11272.1 - 1.4 9.7 11.8 0.11 13.2 2.8 2.5 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 AHX11272.1 - 1.9 9.6 21.0 5.3 8.2 8.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 AHX11272.1 - 2.6 7.9 14.2 0.76 9.6 5.0 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 AHX11272.1 - 6.1 7.1 17.4 1.8 8.8 3.1 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain tRNA-synt_1e PF01406.19 AHX11274.1 - 1.1e-109 366.4 0.0 2.4e-109 365.3 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 AHX11274.1 - 7e-14 51.4 0.0 1.2e-06 27.5 0.0 2.5 2 1 1 3 3 3 2 tRNA synthetases class I (M) DALR_2 PF09190.11 AHX11274.1 - 5.9e-10 39.5 0.1 1.2e-09 38.5 0.1 1.5 1 0 0 1 1 1 1 DALR domain tRNA-synt_1f PF01921.18 AHX11274.1 - 1.2e-05 24.5 0.0 0.021 13.8 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 AHX11274.1 - 1.5e-05 23.5 0.0 8.6e-05 21.0 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Ribul_P_3_epim PF00834.19 AHX11276.1 - 2.1e-70 236.1 0.9 2.6e-70 235.9 0.9 1.1 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family PcrB PF01884.17 AHX11276.1 - 4.5e-06 26.3 0.7 0.091 12.2 0.0 2.5 3 0 0 3 3 3 2 PcrB family Peptidase_M24 PF00557.24 AHX11277.1 - 2.1e-53 181.1 0.0 2.4e-53 181.0 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 COQ7 PF03232.13 AHX11279.1 - 4.9e-57 192.4 0.1 5.5e-57 192.3 0.1 1.0 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 Rubrerythrin PF02915.17 AHX11279.1 - 0.015 15.7 0.0 0.034 14.5 0.0 1.6 1 1 0 1 1 1 0 Rubrerythrin Ferritin_2 PF13668.6 AHX11279.1 - 0.017 15.4 0.2 3 8.0 0.0 2.2 1 1 0 2 2 2 0 Ferritin-like domain DsbB PF02600.16 AHX11280.1 - 2.4e-24 86.5 4.7 2.8e-24 86.2 4.7 1.0 1 0 0 1 1 1 1 Disulfide bond formation protein DsbB TTC5_OB PF16669.5 AHX11280.1 - 0.091 12.5 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat protein 5 OB fold domain DUF3951 PF13131.6 AHX11280.1 - 0.17 12.1 0.3 0.17 12.1 0.3 3.7 3 1 1 4 4 4 0 Protein of unknown function (DUF3951) Sigma70_r4 PF04545.16 AHX11282.1 - 1.8e-15 56.2 0.4 8.1e-14 50.9 0.3 2.9 3 0 0 3 3 3 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 AHX11282.1 - 2.4e-15 56.0 0.0 5.6e-15 54.9 0.0 1.7 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r3 PF04539.16 AHX11282.1 - 0.00035 20.6 2.1 0.025 14.7 0.5 2.6 2 0 0 2 2 2 1 Sigma-70 region 3 Sigma70_r4_2 PF08281.12 AHX11282.1 - 0.0017 18.0 0.6 0.018 14.7 0.3 2.5 2 1 0 2 2 2 1 Sigma-70, region 4 HTH_5 PF01022.20 AHX11282.1 - 0.1 12.5 0.4 0.29 11.0 0.1 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_16 PF12645.7 AHX11282.1 - 0.11 12.6 0.1 0.4 10.8 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_WhiA PF02650.14 AHX11282.1 - 0.41 11.0 2.5 1.3 9.4 0.7 2.6 3 0 0 3 3 3 0 WhiA C-terminal HTH domain Tubulin PF00091.25 AHX11283.1 - 3.7e-37 128.5 0.2 6.2e-37 127.7 0.2 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 AHX11283.1 - 1.6e-33 114.8 1.7 1.6e-33 114.8 1.7 1.9 2 0 0 2 2 2 1 FtsZ family, C-terminal domain MafB PF06255.13 AHX11283.1 - 0.11 11.9 3.6 0.093 12.2 0.6 1.9 2 0 0 2 2 2 0 Neisseria toxin MafB Transpeptidase PF00905.22 AHX11284.1 - 1.2e-48 166.0 0.0 1.5e-48 165.6 0.0 1.1 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 AHX11284.1 - 3.4e-09 37.3 0.0 1.1e-08 35.7 0.0 1.8 2 0 0 2 2 2 1 Penicillin-binding Protein dimerisation domain Ribosomal_S30AE PF02482.19 AHX11285.1 - 3.7e-14 53.3 0.0 6.5e-14 52.5 0.0 1.4 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein Ribosom_S30AE_C PF16321.5 AHX11285.1 - 2.6e-12 46.2 0.1 4.8e-12 45.4 0.1 1.3 1 0 0 1 1 1 1 Sigma 54 modulation/S30EA ribosomal protein C terminus TnpB_IS66 PF05717.13 AHX11285.1 - 0.021 14.8 0.0 0.038 13.9 0.0 1.4 1 0 0 1 1 1 0 IS66 Orf2 like protein tRNA-synt_1b PF00579.25 AHX11286.1 - 5.8e-75 252.3 0.0 7.7e-75 251.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) S4 PF01479.25 AHX11286.1 - 2.9e-07 30.1 0.0 7.1e-07 28.8 0.0 1.6 1 0 0 1 1 1 1 S4 domain DUF4878 PF12870.7 AHX11286.1 - 0.029 14.7 1.9 0.45 10.8 0.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4878) Ferritin PF00210.24 AHX11287.1 - 1.4e-36 125.5 0.5 1.6e-36 125.4 0.5 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 AHX11287.1 - 7.9e-06 26.3 0.9 0.076 13.4 0.1 2.1 2 0 0 2 2 2 2 Rubrerythrin COQ7 PF03232.13 AHX11287.1 - 0.022 14.5 0.2 0.14 11.9 0.0 1.9 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 Ferritin_2 PF13668.6 AHX11287.1 - 0.084 13.1 0.7 0.45 10.7 0.0 2.0 1 1 0 1 1 1 0 Ferritin-like domain Lon_C PF05362.13 AHX11288.1 - 2e-83 278.9 0.9 3.6e-83 278.1 0.9 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain LON_substr_bdg PF02190.16 AHX11288.1 - 2.7e-33 115.6 1.0 2.7e-33 115.6 1.0 2.2 2 0 0 2 2 2 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 AHX11288.1 - 1.1e-21 77.6 0.0 2.9e-21 76.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AHX11288.1 - 2.4e-10 40.5 0.0 6.1e-10 39.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 AHX11288.1 - 1.9e-06 28.4 1.7 0.0012 19.2 1.0 4.0 3 1 0 3 3 3 1 AAA ATPase domain AAA_PrkA PF08298.11 AHX11288.1 - 2e-06 27.0 0.5 9.6e-06 24.7 0.0 2.1 2 0 0 2 2 2 1 PrkA AAA domain ChlI PF13541.6 AHX11288.1 - 2.4e-06 27.4 0.0 7.1e-06 25.9 0.0 1.9 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_22 PF13401.6 AHX11288.1 - 3.6e-05 24.0 0.1 0.0037 17.5 0.1 2.8 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.12 AHX11288.1 - 0.00013 21.8 0.4 0.00044 20.0 0.0 2.0 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 AHX11288.1 - 0.0002 21.1 0.0 0.00043 20.0 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.14 AHX11288.1 - 0.00023 21.4 0.3 0.00075 19.6 0.0 2.0 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) IstB_IS21 PF01695.17 AHX11288.1 - 0.00029 20.6 1.0 0.00062 19.5 0.0 2.1 3 0 0 3 3 2 1 IstB-like ATP binding protein NACHT PF05729.12 AHX11288.1 - 0.00054 19.9 0.0 0.044 13.7 0.0 2.6 2 0 0 2 2 2 1 NACHT domain NB-ARC PF00931.22 AHX11288.1 - 0.00088 18.5 1.1 0.018 14.2 0.0 2.5 2 0 0 2 2 2 1 NB-ARC domain ClpB_D2-small PF10431.9 AHX11288.1 - 0.0014 18.7 0.6 0.0014 18.7 0.6 2.3 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA_18 PF13238.6 AHX11288.1 - 0.0016 19.0 0.0 0.0067 17.0 0.0 2.1 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AHX11288.1 - 0.003 17.5 0.0 0.0091 15.9 0.0 1.8 1 0 0 1 1 1 1 RsgA GTPase AAA_14 PF13173.6 AHX11288.1 - 0.0052 16.8 0.2 0.019 15.0 0.0 2.1 2 0 0 2 2 1 1 AAA domain RNA_helicase PF00910.22 AHX11288.1 - 0.0061 16.9 0.0 0.13 12.7 0.0 2.8 2 0 0 2 2 2 1 RNA helicase AAA_17 PF13207.6 AHX11288.1 - 0.013 15.9 1.0 0.15 12.5 0.0 2.9 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 AHX11288.1 - 0.015 15.3 0.0 0.054 13.5 0.0 1.9 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 AHX11288.1 - 0.019 15.5 2.0 0.089 13.3 0.0 2.7 2 1 0 2 2 2 0 ABC transporter AAA_28 PF13521.6 AHX11288.1 - 0.02 15.1 0.1 0.07 13.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_3 PF07726.11 AHX11288.1 - 0.02 14.7 0.0 0.057 13.3 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 AHX11288.1 - 0.021 15.0 0.0 0.041 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 AHX11288.1 - 0.039 13.7 0.8 4.5 7.0 0.0 2.8 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Parvo_NS1 PF01057.17 AHX11288.1 - 0.041 13.0 0.0 0.081 12.0 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 AHX11288.1 - 0.05 13.2 0.1 0.099 12.2 0.1 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AHX11288.1 - 0.096 12.8 0.0 0.53 10.4 0.0 2.4 2 0 0 2 2 2 0 50S ribosome-binding GTPase TMP-TENI PF02581.17 AHX11289.1 - 6.8e-13 48.3 0.0 7.9e-13 48.1 0.0 1.0 1 0 0 1 1 1 1 Thiamine monophosphate synthase UPF0093 PF03653.13 AHX11290.1 - 1.1e-24 87.3 3.8 1.2e-24 87.2 3.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0093) CopD PF05425.13 AHX11290.1 - 0.022 15.1 4.1 0.027 14.9 4.1 1.1 1 0 0 1 1 1 0 Copper resistance protein D MNHE PF01899.16 AHX11290.1 - 8.7 6.1 11.3 1.6 8.5 7.8 1.5 2 0 0 2 2 2 0 Na+/H+ ion antiporter subunit Gln-synt_C PF00120.24 AHX11291.1 - 1.2e-103 346.8 0.0 1.4e-103 346.5 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 AHX11291.1 - 5.5e-24 83.7 0.1 1.2e-23 82.6 0.1 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain HofP PF10748.9 AHX11291.1 - 0.11 12.1 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 DNA utilization proteins HofP ATP-cone PF03477.16 AHX11292.1 - 1.5e-13 51.1 0.8 2e-13 50.7 0.8 1.2 1 0 0 1 1 1 1 ATP cone domain Lar_restr_allev PF14354.6 AHX11292.1 - 5.8e-05 23.4 0.2 0.0001 22.6 0.2 1.4 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 AHX11292.1 - 0.0079 15.7 1.1 0.11 12.0 0.1 2.3 2 0 0 2 2 2 1 TFIIB zinc-binding TFIIS_C PF01096.18 AHX11292.1 - 0.01 15.7 1.1 0.63 9.9 0.1 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-ribbon_3 PF13248.6 AHX11292.1 - 0.012 15.0 0.3 4.7 6.8 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 AHX11292.1 - 0.041 13.9 1.1 0.077 13.0 1.1 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain A2L_zn_ribbon PF08792.10 AHX11292.1 - 0.14 11.9 0.4 10 5.9 0.1 2.4 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF3268 PF11672.8 AHX11292.1 - 0.16 12.3 0.3 0.36 11.1 0.2 1.6 1 1 0 1 1 1 0 zinc-finger-containing domain zf-ISL3 PF14690.6 AHX11292.1 - 0.7 10.6 2.7 7.4 7.3 0.2 2.4 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-C2H2_4 PF13894.6 AHX11292.1 - 1 10.3 3.1 19 6.4 0.1 2.8 3 0 0 3 3 3 0 C2H2-type zinc finger DUF948 PF06103.11 AHX11293.1 - 5.5 7.3 8.1 6 7.2 4.8 2.7 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) UvrD-helicase PF00580.21 AHX11294.1 - 2.2e-76 257.4 5.2 2.2e-76 257.4 5.2 2.5 2 2 0 2 2 2 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 AHX11294.1 - 3.6e-66 223.9 2.1 3.6e-66 223.9 2.1 2.1 2 1 0 2 2 2 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 AHX11294.1 - 1.4e-31 109.8 0.1 3.7e-31 108.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AHX11294.1 - 1.2e-09 38.1 0.1 0.00089 19.0 0.1 2.4 2 0 0 2 2 2 2 AAA domain UvrD_C_2 PF13538.6 AHX11294.1 - 7.9e-09 35.2 0.0 4.1e-08 32.9 0.0 2.2 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 AHX11294.1 - 7.7e-06 25.8 0.1 0.45 10.2 0.0 3.5 3 1 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_11 PF13086.6 AHX11294.1 - 1.6e-05 24.9 0.0 5.8e-05 23.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 AHX11294.1 - 0.031 14.1 0.1 0.079 12.8 0.1 1.7 1 0 0 1 1 1 0 Helicase TatD_DNase PF01026.21 AHX11296.1 - 1.3e-69 234.5 0.1 1.4e-69 234.3 0.1 1.0 1 0 0 1 1 1 1 TatD related DNase DUF365 PF04033.12 AHX11296.1 - 0.17 12.2 0.0 0.34 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF365) SecB PF02556.14 AHX11298.1 - 2.7e-43 147.3 0.0 3.2e-43 147.0 0.0 1.0 1 0 0 1 1 1 1 Preprotein translocase subunit SecB Tim44 PF04280.15 AHX11299.1 - 1.3e-30 106.5 0.0 2e-30 105.8 0.0 1.2 1 0 0 1 1 1 1 Tim44-like domain DUF4440 PF14534.6 AHX11299.1 - 0.098 13.1 0.0 0.18 12.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) RrnaAD PF00398.20 AHX11300.1 - 5.9e-44 150.1 0.0 7.5e-44 149.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_28 PF02636.17 AHX11300.1 - 0.023 14.3 0.0 0.056 13.1 0.0 1.6 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase NMD3 PF04981.13 AHX11301.1 - 0.019 14.4 0.2 0.035 13.6 0.2 1.4 1 0 0 1 1 1 0 NMD3 family HATPase_c PF02518.26 AHX11302.1 - 2.9e-21 76.1 1.0 9.6e-21 74.4 0.3 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 AHX11302.1 - 7.5e-20 71.2 0.6 2.3e-19 69.6 0.6 1.9 1 0 0 1 1 1 1 Response regulator receiver domain HisKA PF00512.25 AHX11302.1 - 5.4e-10 39.2 0.0 1.5e-09 37.8 0.0 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAUS4 PF14735.6 AHX11302.1 - 0.0026 17.5 0.1 0.0048 16.6 0.1 1.4 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 4 HATPase_c_3 PF13589.6 AHX11302.1 - 0.014 15.3 0.0 0.032 14.1 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TFIID_NTD2 PF04494.15 AHX11302.1 - 0.026 14.7 1.0 1.2 9.4 0.1 2.6 2 0 0 2 2 2 0 WD40 associated region in TFIID subunit, NTD2 domain PAS_9 PF13426.7 AHX11302.1 - 0.13 12.6 0.0 0.69 10.2 0.0 2.4 1 0 0 1 1 1 0 PAS domain PAS_8 PF13188.7 AHX11302.1 - 0.13 12.3 0.0 0.37 10.9 0.0 1.7 1 0 0 1 1 1 0 PAS domain tRNA-synt_2b PF00587.25 AHX11303.1 - 6.9e-37 127.1 0.0 1e-36 126.6 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 AHX11303.1 - 1.5e-09 37.9 0.0 4e-09 36.5 0.0 1.7 1 0 0 1 1 1 1 Anticodon binding domain SPW PF03779.14 AHX11304.1 - 0.028 14.0 1.2 0.16 11.6 0.1 2.3 2 0 0 2 2 2 0 SPW repeat Saf_2TM PF18303.1 AHX11304.1 - 0.43 10.2 6.0 0.089 12.4 1.5 1.9 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain DUF3082 PF11282.8 AHX11304.1 - 0.84 9.9 7.1 0.82 10.0 1.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3082) VIT1 PF01988.19 AHX11304.1 - 5.8 6.7 7.8 3.7 7.4 1.1 2.1 1 1 1 2 2 2 0 VIT family DUF525 PF04379.14 AHX11305.1 - 0.0071 16.6 0.1 0.0093 16.2 0.1 1.1 1 0 0 1 1 1 1 ApaG domain F-box_5 PF18511.1 AHX11305.1 - 0.074 12.6 0.2 0.32 10.6 0.1 2.0 2 1 1 3 3 3 0 F-box PEP-utilizers_C PF02896.18 AHX11306.1 - 1.1e-84 284.1 0.0 2.1e-84 283.1 0.0 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 AHX11306.1 - 1.7e-52 178.8 0.0 3.1e-40 138.4 0.0 3.2 1 1 1 2 2 2 2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 AHX11306.1 - 2.4e-25 88.0 3.6 3.1e-25 87.7 1.9 2.0 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain Putative_PNPOx PF01243.20 AHX11307.1 - 1.3e-18 66.9 0.0 2e-18 66.3 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase PNP_phzG_C PF10590.9 AHX11307.1 - 3.5e-12 46.2 0.2 5.9e-12 45.5 0.2 1.4 1 0 0 1 1 1 1 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Pyridox_oxase_2 PF12766.7 AHX11307.1 - 0.00025 21.6 0.0 0.00048 20.7 0.0 1.5 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 AHX11307.1 - 0.0035 16.9 0.0 0.0049 16.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like SH3_14 PF18343.1 AHX11307.1 - 0.06 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Dda helicase SH3 domain THDPS_N_2 PF14805.6 AHX11308.1 - 2.4e-17 62.9 0.4 3.8e-17 62.3 0.4 1.3 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal Hexapep PF00132.24 AHX11308.1 - 3.5e-16 58.2 13.5 5.2e-07 29.1 0.7 3.8 4 0 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AHX11308.1 - 9.6e-14 50.8 12.5 7.4e-13 48.0 2.6 3.1 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Dus PF01207.17 AHX11310.1 - 2.2e-107 358.8 0.4 2.5e-107 358.5 0.4 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 AHX11310.1 - 5.2e-06 26.1 0.1 9.9e-06 25.2 0.1 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein DHO_dh PF01180.21 AHX11310.1 - 0.00011 21.5 0.6 0.2 10.9 0.1 2.2 1 1 1 2 2 2 2 Dihydroorotate dehydrogenase NMO PF03060.15 AHX11310.1 - 0.00024 20.6 0.1 0.00054 19.5 0.0 1.6 2 0 0 2 2 2 1 Nitronate monooxygenase PEP_mutase PF13714.6 AHX11310.1 - 0.00063 19.3 0.1 0.006 16.1 0.1 2.5 1 1 1 2 2 2 1 Phosphoenolpyruvate phosphomutase IMPDH PF00478.25 AHX11310.1 - 0.0018 17.3 0.1 0.0034 16.4 0.1 1.4 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain DeoC PF01791.9 AHX11310.1 - 0.0031 17.2 0.8 4.1 7.0 0.0 2.8 1 1 2 3 3 3 3 DeoC/LacD family aldolase SOR_SNZ PF01680.17 AHX11310.1 - 0.0075 16.1 0.9 0.77 9.5 0.0 2.5 1 1 1 2 2 2 2 SOR/SNZ family PIN_10 PF18478.1 AHX11310.1 - 0.0082 16.3 0.0 0.016 15.4 0.0 1.5 1 0 0 1 1 1 1 PIN like domain G3P_antiterm PF04309.12 AHX11310.1 - 0.01 15.3 0.0 0.022 14.2 0.0 1.5 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator Pterin_bind PF00809.22 AHX11310.1 - 0.034 13.8 0.9 3.6 7.2 0.0 2.7 2 1 1 3 3 3 0 Pterin binding enzyme TMP-TENI PF02581.17 AHX11310.1 - 0.042 13.2 0.1 0.19 11.1 0.1 2.1 1 1 1 2 2 2 0 Thiamine monophosphate synthase SurE PF01975.17 AHX11311.1 - 3e-35 121.8 0.1 7.8e-35 120.4 0.0 1.6 1 1 1 2 2 2 1 Survival protein SurE FMO-like PF00743.19 AHX11311.1 - 0.041 12.3 0.0 0.052 12.0 0.0 1.1 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like FAD_binding_2 PF00890.24 AHX11313.1 - 3e-123 412.0 2.4 3.9e-123 411.6 2.4 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 AHX11313.1 - 2.1e-44 150.6 0.1 3.2e-44 150.0 0.1 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Thi4 PF01946.17 AHX11313.1 - 1.3e-05 24.5 1.0 0.00047 19.5 0.2 2.6 2 0 0 2 2 2 1 Thi4 family Pyr_redox_2 PF07992.14 AHX11313.1 - 8.6e-05 21.9 1.1 0.00034 20.0 0.4 2.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AHX11313.1 - 0.0034 16.5 2.7 0.08 12.0 1.6 2.4 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 AHX11313.1 - 0.019 14.2 0.8 0.042 13.1 0.8 1.6 1 0 0 1 1 1 0 FAD binding domain FAD_oxidored PF12831.7 AHX11313.1 - 0.044 13.1 6.2 0.71 9.2 1.3 2.5 3 0 0 3 3 3 0 FAD dependent oxidoreductase HI0933_like PF03486.14 AHX11313.1 - 0.054 12.2 1.0 0.18 10.4 0.6 2.0 2 0 0 2 2 2 0 HI0933-like protein DAO PF01266.24 AHX11313.1 - 0.055 13.0 0.4 0.25 10.9 0.2 2.0 2 0 0 2 2 2 0 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AHX11313.1 - 0.18 11.1 0.6 5.4 6.2 0.1 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 AHX11313.1 - 0.34 11.4 2.8 9.7 6.7 0.0 3.1 3 1 0 3 3 2 0 Putative NAD(P)-binding DNA_pol3_delta2 PF13177.6 AHX11314.1 - 6.9e-23 81.2 5.3 1.3e-19 70.6 4.1 2.3 1 1 1 2 2 2 2 DNA polymerase III, delta subunit AAA PF00004.29 AHX11314.1 - 0.024 15.0 0.4 0.041 14.3 0.4 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ADH_zinc_N PF00107.26 AHX11315.1 - 2.5e-10 40.4 0.0 4.5e-10 39.6 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AHX11315.1 - 1.8e-09 38.8 0.0 3.4e-09 37.8 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AHX11315.1 - 7.6e-06 25.8 0.0 1.5e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ETC_C1_NDUFA4 PF04800.12 AHX11316.1 - 2.3e-25 88.6 0.1 2.6e-25 88.5 0.1 1.0 1 0 0 1 1 1 1 ETC complex I subunit conserved region FAD_binding_3 PF01494.19 AHX11317.1 - 2.3e-26 92.9 0.0 2.7e-26 92.6 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 AHX11317.1 - 0.00084 19.5 0.1 0.002 18.3 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain SE PF08491.10 AHX11317.1 - 0.027 13.5 0.0 0.041 12.9 0.0 1.3 1 0 0 1 1 1 0 Squalene epoxidase HI0933_like PF03486.14 AHX11317.1 - 0.038 12.7 0.0 5.8 5.5 0.0 2.1 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox_2 PF07992.14 AHX11317.1 - 0.047 12.9 0.0 0.48 9.6 0.0 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AHX11317.1 - 0.07 12.4 0.0 5.7 6.1 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Porphobil_deam PF01379.20 AHX11318.1 - 3.8e-61 206.2 0.0 4.8e-61 205.8 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 AHX11318.1 - 3.7e-08 33.6 0.5 7.6e-08 32.6 0.1 1.8 2 0 0 2 2 2 1 Porphobilinogen deaminase, C-terminal domain RmlD_sub_bind PF04321.17 AHX11319.1 - 6.9e-16 58.2 0.0 4.3e-11 42.4 0.0 2.3 2 0 0 2 2 2 2 RmlD substrate binding domain 3Beta_HSD PF01073.19 AHX11319.1 - 4.9e-15 55.3 0.1 1.8e-10 40.3 0.1 2.2 1 1 1 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 AHX11319.1 - 6.3e-15 55.3 0.0 1.7e-13 50.6 0.0 2.1 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AHX11319.1 - 1.4e-11 44.6 0.0 2.5e-11 43.8 0.0 1.3 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 AHX11319.1 - 2.9e-11 43.4 0.0 6.7e-11 42.2 0.0 1.5 1 1 0 1 1 1 1 NmrA-like family Sacchrp_dh_NADP PF03435.18 AHX11319.1 - 7e-06 26.3 0.0 1.1e-05 25.7 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_4 PF07993.12 AHX11319.1 - 8e-06 25.2 0.0 0.05 12.8 0.0 2.8 1 1 1 2 2 2 2 Male sterility protein GDP_Man_Dehyd PF16363.5 AHX11319.1 - 0.00052 19.5 0.1 0.0011 18.4 0.0 1.6 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 AHX11319.1 - 0.0055 15.9 0.0 0.0083 15.3 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 AHX11319.1 - 0.021 14.8 0.0 0.064 13.2 0.0 1.7 2 0 0 2 2 2 0 KR domain adh_short PF00106.25 AHX11319.1 - 0.029 13.8 0.0 0.051 13.0 0.0 1.4 1 1 0 1 1 1 0 short chain dehydrogenase ApbA PF02558.16 AHX11319.1 - 0.031 13.9 0.0 0.047 13.3 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Nif11 PF07862.11 AHX11319.1 - 0.22 11.8 0.0 0.46 10.8 0.0 1.5 1 0 0 1 1 1 0 Nif11 domain DprA_WH PF17782.1 AHX11320.1 - 3.4e-05 23.9 0.1 0.00012 22.1 0.1 1.8 2 0 0 2 2 2 1 DprA winged helix domain DNA_processg_A PF02481.15 AHX11322.1 - 0.0012 18.2 0.0 0.0016 17.7 0.0 1.2 1 0 0 1 1 1 1 DNA recombination-mediator protein A PAS_5 PF07310.13 AHX11323.1 - 1.3e-08 34.7 0.0 1.6e-08 34.4 0.0 1.0 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 AHX11323.1 - 0.013 15.7 0.0 0.019 15.2 0.0 1.3 1 0 0 1 1 1 0 PAS fold Pep_deformylase PF01327.21 AHX11324.1 - 1.7e-44 151.2 0.0 2e-44 151.0 0.0 1.1 1 0 0 1 1 1 1 Polypeptide deformylase ALAD PF00490.21 AHX11325.1 - 1e-110 369.8 0.0 1.2e-110 369.6 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase DUF2674 PF10879.8 AHX11325.1 - 0.18 11.4 0.0 0.36 10.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2674) Virul_fac_BrkB PF03631.15 AHX11326.1 - 1.4e-52 178.9 20.5 1.6e-52 178.7 20.5 1.0 1 0 0 1 1 1 1 Virulence factor BrkB DUF1304 PF06993.12 AHX11326.1 - 0.033 14.2 0.2 0.033 14.2 0.2 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1304) CcmF_C PF16327.5 AHX11326.1 - 1.6 7.9 10.6 1.4 8.2 9.6 1.3 1 1 0 1 1 1 0 Cytochrome c-type biogenesis protein CcmF C-terminal ATP-synt_A PF00119.20 AHX11327.1 - 1.1e-53 182.4 33.3 1.3e-53 182.1 33.3 1.0 1 0 0 1 1 1 1 ATP synthase A chain ATP-synt_C PF00137.21 AHX11328.1 - 2.4e-11 43.8 3.6 2.9e-11 43.6 3.6 1.0 1 0 0 1 1 1 1 ATP synthase subunit C YMF19 PF02326.15 AHX11329.1 - 6.7e-15 55.6 3.7 1.3e-12 48.3 1.7 2.5 1 1 2 3 3 3 2 Plant ATP synthase F0 ATP-synt_B PF00430.18 AHX11329.1 - 1.9e-07 31.2 0.0 2.3e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) DUF4015 PF13200.6 AHX11329.1 - 0.054 12.5 0.2 0.18 10.8 0.2 1.7 1 1 0 1 1 1 0 Putative glycosyl hydrolase domain DivIVA PF05103.13 AHX11329.1 - 0.065 13.3 0.7 0.095 12.8 0.7 1.2 1 0 0 1 1 1 0 DivIVA protein ATP-synt_8 PF00895.20 AHX11329.1 - 0.25 11.8 2.4 0.5 10.9 2.4 1.5 1 0 0 1 1 1 0 ATP synthase protein 8 SieB PF14163.6 AHX11329.1 - 2.7 7.5 6.5 7.4 6.1 0.1 2.1 1 1 1 2 2 2 0 Super-infection exclusion protein B ATP-synt_B PF00430.18 AHX11330.1 - 3.4e-08 33.7 5.1 4.3e-08 33.3 5.1 1.1 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) Laminin_II PF06009.12 AHX11330.1 - 0.0022 18.0 1.1 0.0024 17.9 0.3 1.5 2 0 0 2 2 2 1 Laminin Domain II Fib_alpha PF08702.10 AHX11330.1 - 0.0038 17.4 1.2 0.0079 16.4 0.2 1.8 1 1 1 2 2 2 1 Fibrinogen alpha/beta chain family SpoU_sub_bind PF08032.12 AHX11330.1 - 0.0081 16.4 0.5 0.022 15.0 0.3 1.8 1 1 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding CKAP2_C PF15297.6 AHX11330.1 - 0.0082 15.3 0.8 0.011 14.8 0.8 1.1 1 0 0 1 1 1 1 Cytoskeleton-associated protein 2 C-terminus DUF4449 PF14613.6 AHX11330.1 - 0.0098 16.0 1.8 0.011 15.9 0.6 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF4449) Apolipoprotein PF01442.18 AHX11330.1 - 0.011 15.6 2.8 0.011 15.6 2.8 1.7 2 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain DUF948 PF06103.11 AHX11330.1 - 0.011 15.9 0.6 0.036 14.3 0.4 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Frataxin_Cyay PF01491.16 AHX11331.1 - 1.3e-06 28.5 0.0 1.3e-06 28.4 0.0 1.0 1 0 0 1 1 1 1 Frataxin-like domain DMRL_synthase PF00885.19 AHX11332.1 - 1.6e-36 125.2 0.0 1.8e-36 125.1 0.0 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase 60KD_IMP PF02096.20 AHX11333.1 - 4.2e-51 173.1 9.0 8e-51 172.2 9.0 1.5 1 0 0 1 1 1 1 60Kd inner membrane protein YidC_periplas PF14849.6 AHX11333.1 - 4.5e-49 167.9 0.1 5.6e-49 167.5 0.1 1.1 1 0 0 1 1 1 1 YidC periplasmic domain DUF21 PF01595.20 AHX11334.1 - 2.7e-38 131.4 5.9 4e-38 130.9 5.9 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 AHX11334.1 - 6.7e-19 67.7 0.0 1.5e-17 63.4 0.0 2.3 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 AHX11334.1 - 9.1e-05 22.8 0.6 0.0079 16.6 0.0 3.2 3 0 0 3 3 3 1 CBS domain PCRF PF03462.18 AHX11335.1 - 3.8e-67 225.9 0.1 3.8e-67 225.9 0.1 1.5 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 AHX11335.1 - 3.9e-40 136.4 2.7 9e-40 135.2 2.7 1.6 1 0 0 1 1 1 1 RF-1 domain MIR PF02815.19 AHX11335.1 - 0.032 14.1 0.2 0.057 13.3 0.2 1.5 1 0 0 1 1 1 0 MIR domain Acyltransferase PF01553.21 AHX11336.1 - 2.1e-18 66.2 0.0 2.9e-18 65.8 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase S1 PF00575.23 AHX11338.1 - 4.5e-55 183.9 22.6 1.3e-13 51.1 2.4 6.5 6 1 0 6 6 6 6 S1 RNA binding domain RNase_II_C_S1 PF18614.1 AHX11338.1 - 1.2e-07 31.5 0.2 0.12 12.4 0.0 4.2 3 1 0 3 3 3 2 RNase II-type exonuclease C-terminal S1 domain PCB_OB PF17092.5 AHX11338.1 - 7.8e-06 26.6 0.2 0.0066 17.2 0.0 4.5 3 1 2 5 5 5 1 Penicillin-binding protein OB-like domain S1_2 PF13509.6 AHX11338.1 - 4.3e-05 23.5 2.9 14 5.8 0.0 5.9 7 0 0 7 7 7 1 S1 domain Phage_TAC_4 PF08748.11 AHX11338.1 - 0.015 15.6 0.0 1.4 9.3 0.0 3.1 3 0 0 3 3 3 0 Phage tail assembly chaperone RNA_pol_Rbc25 PF08292.12 AHX11338.1 - 0.035 14.4 1.0 28 4.9 0.0 4.0 4 1 0 4 4 4 0 RNA polymerase III subunit Rpc25 CusF_Ec PF11604.8 AHX11338.1 - 0.1 12.6 0.1 15 5.6 0.0 3.7 3 0 0 3 3 3 0 Copper binding periplasmic protein CusF DUF2110 PF09883.9 AHX11338.1 - 0.15 11.6 2.0 15 5.1 0.0 3.5 3 1 1 4 4 4 0 Uncharacterized protein conserved in archaea (DUF2110) Peptidase_S49 PF01343.18 AHX11339.1 - 1e-37 129.5 0.3 1.4e-37 129.0 0.3 1.2 1 0 0 1 1 1 1 Peptidase family S49 SDH_sah PF01972.16 AHX11339.1 - 6e-08 32.0 1.0 8.5e-08 31.5 1.0 1.1 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.23 AHX11339.1 - 3.6e-07 30.2 2.2 9.7e-07 28.8 1.1 2.0 2 0 0 2 2 2 1 Clp protease Succ_CoA_lig PF13607.6 AHX11339.1 - 0.0042 16.9 0.1 0.0079 16.0 0.1 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain ABC_tran PF00005.27 AHX11340.1 - 6.2e-28 98.0 0.0 1e-27 97.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AHX11340.1 - 2.3e-16 60.3 27.3 3.6e-16 59.6 27.3 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 AHX11340.1 - 0.00038 20.0 4.4 0.0034 16.9 4.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AHX11340.1 - 0.0017 18.3 0.0 0.0038 17.1 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 AHX11340.1 - 0.008 15.9 0.1 0.017 14.9 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AHX11340.1 - 0.027 14.8 0.0 0.052 13.9 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 AHX11340.1 - 0.048 13.9 0.0 0.14 12.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AHX11340.1 - 0.072 12.8 0.2 0.39 10.4 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein ABC_membrane_3 PF13748.6 AHX11340.1 - 0.92 8.7 13.8 0.11 11.7 6.2 2.2 2 0 0 2 2 2 0 ABC transporter transmembrane region TMEM215 PF15746.5 AHX11340.1 - 0.95 8.9 3.7 0.45 9.9 0.1 2.1 2 0 0 2 2 2 0 TMEM215 family Ribonuc_red_lgC PF02867.15 AHX11341.1 - 1.6e-110 370.1 0.0 3.3e-71 240.4 0.0 2.1 2 0 0 2 2 2 2 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 AHX11341.1 - 6.4e-14 51.7 0.0 1.2e-13 50.8 0.0 1.5 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain IFNGR1 PF07140.11 AHX11341.1 - 0.1 12.7 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) HIT PF01230.23 AHX11342.1 - 3e-25 88.8 0.0 3.5e-25 88.6 0.0 1.0 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 AHX11342.1 - 2.2e-15 57.1 0.0 2.7e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding PilO PF04350.13 AHX11342.1 - 0.036 14.2 0.1 0.81 9.8 0.0 2.1 1 1 1 2 2 2 0 Pilus assembly protein, PilO Exo_endo_phos PF03372.23 AHX11343.1 - 8.2e-17 61.5 0.0 1e-16 61.2 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family DUF1409 PF07197.12 AHX11343.1 - 0.043 13.7 0.6 0.1 12.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1409) DUF3410 PF11890.8 AHX11343.1 - 0.16 11.8 0.2 0.32 10.8 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) Pribosyltran PF00156.27 AHX11344.1 - 7.1e-06 25.6 0.1 7.9e-06 25.5 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 AHX11344.1 - 3.1e-05 23.5 0.1 3.5e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 AHX11344.1 - 0.00019 21.0 0.1 0.00024 20.7 0.1 1.3 1 1 0 1 1 1 1 Phosphoribosyl transferase PRTase_3 PF15610.6 AHX11344.1 - 0.00081 18.7 0.1 0.00093 18.5 0.1 1.0 1 0 0 1 1 1 1 PRTase ComF-like SecD_SecF PF02355.16 AHX11345.1 - 2.2e-53 180.5 11.1 2.2e-53 180.5 11.1 1.7 2 0 0 2 2 2 1 Protein export membrane protein Sec_GG PF07549.14 AHX11345.1 - 9.5e-09 34.5 2.9 1.7e-08 33.7 2.9 1.5 1 0 0 1 1 1 1 SecD/SecF GG Motif PTA_PTB PF01515.19 AHX11346.1 - 1.5e-68 231.5 0.0 2.5e-68 230.8 0.0 1.4 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase malic PF00390.19 AHX11346.1 - 3e-30 105.4 0.6 6.5e-28 97.8 0.1 2.9 2 1 0 2 2 2 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 AHX11346.1 - 3.6e-13 49.4 0.5 1.9e-12 47.1 0.5 2.1 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain ELFV_dehydrog PF00208.21 AHX11346.1 - 0.078 12.7 6.7 0.033 13.9 1.9 2.6 2 1 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 2-Hacid_dh_C PF02826.19 AHX11346.1 - 0.079 12.3 0.1 0.25 10.7 0.0 1.8 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 AHX11346.1 - 0.17 11.2 1.0 0.49 9.7 1.0 1.7 1 0 0 1 1 1 0 ThiF family Peptidase_M41 PF01434.18 AHX11349.1 - 2.3e-63 213.5 0.4 4.3e-63 212.6 0.4 1.5 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 AHX11349.1 - 2.3e-45 154.3 0.0 5.4e-45 153.1 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 AHX11349.1 - 4e-14 52.1 0.1 2e-13 49.9 0.0 2.1 2 0 0 2 2 2 1 AAA+ lid domain FtsH_ext PF06480.15 AHX11349.1 - 5.5e-09 36.4 1.4 2.5e-08 34.2 0.4 2.2 2 0 0 2 2 2 1 FtsH Extracellular TIP49 PF06068.13 AHX11349.1 - 3.3e-05 23.2 0.0 6.9e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_5 PF07728.14 AHX11349.1 - 0.00026 21.0 0.1 0.0039 17.2 0.1 2.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 AHX11349.1 - 0.00034 21.0 0.0 0.0011 19.3 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 AHX11349.1 - 0.00063 19.5 0.0 0.0047 16.7 0.0 2.5 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 AHX11349.1 - 0.001 19.4 0.3 0.056 13.7 0.1 3.0 2 1 0 3 3 3 1 AAA domain IstB_IS21 PF01695.17 AHX11349.1 - 0.0029 17.3 0.0 0.0056 16.4 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_2 PF07724.14 AHX11349.1 - 0.0041 17.3 0.5 0.12 12.5 0.0 3.2 3 0 0 3 3 3 1 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 AHX11349.1 - 0.021 14.2 1.2 0.042 13.2 0.2 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 AHX11349.1 - 0.07 12.8 0.0 0.25 11.1 0.0 2.0 2 0 0 2 2 1 0 AAA domain AAA_17 PF13207.6 AHX11349.1 - 0.072 13.5 0.0 0.17 12.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 AHX11349.1 - 0.081 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AHX11349.1 - 0.097 12.9 0.1 0.3 11.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 AHX11349.1 - 0.12 12.9 0.2 0.38 11.3 0.2 1.8 1 0 0 1 1 1 0 ABC transporter NACHT PF05729.12 AHX11349.1 - 0.28 11.1 1.4 0.63 9.9 0.1 2.3 3 1 1 4 4 4 0 NACHT domain AAA_19 PF13245.6 AHX11349.1 - 3.3 8.0 4.7 2.1 8.7 0.4 2.6 2 1 0 2 2 2 0 AAA domain B3_4 PF03483.17 AHX11350.1 - 1.2e-56 191.1 0.0 1.9e-56 190.5 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain tRNA_synthFbeta PF17759.1 AHX11350.1 - 2.7e-43 147.9 0.0 4.6e-43 147.2 0.0 1.3 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA_bind PF01588.20 AHX11350.1 - 1e-21 76.8 0.3 1.9e-21 75.9 0.3 1.5 1 0 0 1 1 1 1 Putative tRNA binding domain B5 PF03484.15 AHX11350.1 - 3.4e-18 65.7 0.0 5.2e-16 58.7 0.0 2.9 2 0 0 2 2 2 1 tRNA synthetase B5 domain FDX-ACB PF03147.14 AHX11350.1 - 6.8e-12 45.6 0.0 1.6e-11 44.4 0.0 1.7 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain FtsA PF14450.6 AHX11351.1 - 2e-19 69.9 1.3 2.7e-16 59.8 0.2 2.3 2 1 0 2 2 2 2 Cell division protein FtsA MreB_Mbl PF06723.13 AHX11351.1 - 3.5e-10 39.2 1.1 8.4e-10 38.0 1.1 1.6 1 0 0 1 1 1 1 MreB/Mbl protein SHS2_FTSA PF02491.20 AHX11351.1 - 2.2e-09 37.6 0.4 6.7e-09 36.0 0.0 2.1 2 0 0 2 2 2 1 SHS2 domain inserted in FTSA Hydantoinase_A PF01968.18 AHX11351.1 - 0.02 14.2 0.0 0.54 9.5 0.0 2.3 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase Oxidored_q4 PF00507.19 AHX11353.1 - 2.4e-32 111.0 0.6 2.6e-32 110.9 0.6 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Oxidored_q6 PF01058.22 AHX11354.1 - 9.9e-23 80.4 0.1 1.2e-22 80.1 0.1 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.19 AHX11355.1 - 2.4e-35 121.8 0.0 3.1e-35 121.5 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Gp_dh_C PF02800.20 AHX11356.1 - 6.7e-60 201.3 0.0 8.7e-60 200.9 0.0 1.1 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 AHX11356.1 - 1.6e-30 105.4 0.0 3.9e-30 104.2 0.0 1.7 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 AHX11356.1 - 0.0022 17.9 0.0 0.012 15.6 0.0 2.2 2 1 1 3 3 3 1 Zinc-binding dehydrogenase NAD_binding_3 PF03447.16 AHX11356.1 - 0.084 13.5 0.1 0.87 10.3 0.1 2.2 1 1 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 AHX11356.1 - 0.14 11.5 0.1 0.25 10.7 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PGK PF00162.19 AHX11357.1 - 3.9e-97 325.6 0.0 5.3e-97 325.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoglycerate kinase FTSW_RODA_SPOVE PF01098.19 AHX11358.1 - 8.5e-66 222.4 29.9 9.7e-66 222.2 29.9 1.0 1 0 0 1 1 1 1 Cell cycle protein LYTB PF02401.18 AHX11359.1 - 2.4e-86 289.3 1.1 2.7e-86 289.1 1.1 1.0 1 0 0 1 1 1 1 LytB protein NadA PF02445.16 AHX11359.1 - 0.055 12.6 0.6 0.079 12.1 0.1 1.5 2 0 0 2 2 2 0 Quinolinate synthetase A protein DciA PF05258.12 AHX11360.1 - 0.11 12.9 0.0 0.13 12.7 0.0 1.3 1 1 0 1 1 1 0 Dna[CI] antecedent, DciA HEM4 PF02602.15 AHX11361.1 - 7.1e-12 45.2 0.0 7.9e-12 45.0 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD EAL PF00563.20 AHX11362.1 - 1.5e-50 171.9 0.7 3e-50 171.0 0.2 1.6 2 0 0 2 2 2 1 EAL domain TetR_C_8 PF14278.6 AHX11362.1 - 0.08 13.1 2.7 1.1 9.4 0.2 2.8 2 0 0 2 2 2 0 Transcriptional regulator C-terminal region Hemagglutinin PF00509.18 AHX11362.1 - 0.14 10.6 0.1 0.22 9.9 0.1 1.2 1 0 0 1 1 1 0 Haemagglutinin DXP_redisom_C PF08436.12 AHX11363.1 - 2e-28 98.4 0.0 3.8e-28 97.5 0.0 1.5 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DXP_reductoisom PF02670.16 AHX11363.1 - 6.7e-22 78.6 0.0 1.1e-21 77.9 0.0 1.4 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DXPR_C PF13288.6 AHX11363.1 - 2.1e-15 57.0 0.0 4.1e-15 56.1 0.0 1.5 1 0 0 1 1 1 1 DXP reductoisomerase C-terminal domain Peptidase_C25_C PF03785.14 AHX11363.1 - 0.00073 19.3 0.2 0.76 9.7 0.0 2.5 2 0 0 2 2 2 2 Peptidase family C25, C terminal ig-like domain adh_short PF00106.25 AHX11364.1 - 1.1e-23 83.8 0.0 1.3e-23 83.5 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AHX11364.1 - 9.1e-19 67.9 0.0 1.1e-18 67.7 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AHX11364.1 - 1.1e-05 25.5 0.0 1.4e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 KR domain DUF4709 PF15821.5 AHX11364.1 - 0.079 13.3 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4709) DUF1776 PF08643.10 AHX11364.1 - 0.092 12.1 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Epimerase PF01370.21 AHX11364.1 - 0.12 11.9 0.0 0.2 11.1 0.0 1.5 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Phage_integrase PF00589.22 AHX11365.1 - 1.2e-34 119.6 0.0 1.9e-34 118.9 0.0 1.3 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 AHX11365.1 - 3.4e-08 33.7 0.6 2.7e-07 30.8 0.1 2.6 3 0 0 3 3 3 1 Phage integrase, N-terminal SAM-like domain Integrase_1 PF12835.7 AHX11365.1 - 0.038 14.1 0.0 0.072 13.2 0.0 1.5 1 0 0 1 1 1 0 Integrase GATase_5 PF13507.6 AHX11366.1 - 5.9e-53 179.6 0.0 3.1e-52 177.3 0.0 1.9 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 AHX11366.1 - 0.00039 20.1 0.0 0.00059 19.5 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 AHX11366.1 - 0.003 17.4 0.0 0.006 16.4 0.0 1.5 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 AHX11366.1 - 0.038 13.7 0.0 0.074 12.8 0.0 1.4 1 1 0 1 1 1 0 Glutamine amidotransferase class-I HisKA PF00512.25 AHX11366.1 - 0.074 13.1 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain PP-binding PF00550.25 AHX11368.1 - 7.9e-08 32.6 0.2 2.7e-07 30.8 0.1 1.9 2 0 0 2 2 2 1 Phosphopantetheine attachment site ketoacyl-synt PF00109.26 AHX11369.1 - 3e-47 161.3 0.0 4.4e-47 160.8 0.0 1.2 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 AHX11369.1 - 1.1e-33 115.7 0.1 1.7e-33 115.1 0.1 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain Coprogen_oxidas PF01218.18 AHX11370.1 - 1.5e-95 319.3 0.3 1.9e-95 319.0 0.3 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase gag-asp_proteas PF13975.6 AHX11371.1 - 1.5e-19 70.4 0.0 2e-19 69.9 0.0 1.2 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 AHX11371.1 - 4.5e-14 52.9 0.0 6.4e-14 52.4 0.0 1.2 1 0 0 1 1 1 1 Aspartyl protease Asp_protease PF09668.10 AHX11371.1 - 4e-06 26.6 0.0 1.1e-05 25.2 0.0 1.7 1 1 0 1 1 1 1 Aspartyl protease YhcG_C PF06250.11 AHX11371.1 - 0.042 13.7 0.0 0.067 13.0 0.0 1.4 1 0 0 1 1 1 0 YhcG PDDEXK nuclease domain RVP PF00077.20 AHX11371.1 - 0.052 13.9 0.0 0.14 12.5 0.0 1.6 2 0 0 2 2 2 0 Retroviral aspartyl protease AUDH_Cupin PF18637.1 AHX11371.1 - 0.15 12.0 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Aldos-2-ulose dehydratase/isomerase (AUDH) Cupin domain IAT_beta PF11924.8 AHX11373.1 - 1.4e-10 41.1 0.1 2.5e-10 40.2 0.1 1.4 1 0 0 1 1 1 1 Inverse autotransporter, beta-domain Fe-S_biosyn PF01521.20 AHX11375.1 - 2.6e-09 37.3 0.1 3.1e-07 30.5 0.1 2.2 1 1 0 1 1 1 1 Iron-sulphur cluster biosynthesis DnaJ_C PF01556.18 AHX11375.1 - 0.11 12.6 0.0 0.14 12.2 0.0 1.4 1 1 0 1 1 1 0 DnaJ C terminal domain HD_assoc PF13286.6 AHX11376.1 - 3.8e-25 88.3 0.2 1.8e-24 86.1 0.1 2.1 2 0 0 2 2 2 1 Phosphohydrolase-associated domain HD PF01966.22 AHX11376.1 - 3.4e-17 62.8 1.6 1.2e-16 61.1 0.7 2.2 1 1 1 2 2 2 1 HD domain HDOD PF08668.12 AHX11376.1 - 0.00061 19.3 0.0 0.0011 18.5 0.0 1.4 1 0 0 1 1 1 1 HDOD domain RecO_C PF02565.15 AHX11377.1 - 4.4e-16 59.1 0.1 6.2e-16 58.6 0.1 1.2 1 0 0 1 1 1 1 Recombination protein O C terminal RecO_N PF11967.8 AHX11377.1 - 2.2e-05 24.3 0.0 4.9e-05 23.2 0.0 1.7 1 1 0 1 1 1 1 Recombination protein O N terminal DUF5522 PF17653.1 AHX11377.1 - 0.22 11.5 0.4 18 5.4 0.1 3.1 3 0 0 3 3 3 0 Family of unknown function (DUF5522) SspB PF04386.13 AHX11378.1 - 7.9e-34 116.9 0.0 9.5e-34 116.6 0.0 1.0 1 0 0 1 1 1 1 Stringent starvation protein B DPBB_1 PF03330.18 AHX11379.1 - 1.2e-22 79.9 0.0 2.1e-22 79.2 0.0 1.3 1 0 0 1 1 1 1 Lytic transglycolase Pyr_redox_2 PF07992.14 AHX11380.1 - 3e-66 223.6 0.6 4.7e-66 223.0 0.6 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 AHX11380.1 - 1.9e-32 111.8 0.5 3.5e-32 110.9 0.5 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 AHX11380.1 - 2.3e-21 76.1 5.9 2.7e-18 66.3 0.3 3.2 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AHX11380.1 - 2.4e-14 53.3 1.0 9.6e-14 51.3 1.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AHX11380.1 - 7.5e-10 38.4 0.8 7.5e-10 38.4 0.8 3.1 2 2 1 3 3 3 1 Glucose inhibited division protein A HI0933_like PF03486.14 AHX11380.1 - 9.8e-10 37.7 7.5 7.9e-06 24.8 0.3 3.9 3 1 1 4 4 4 2 HI0933-like protein FAD_oxidored PF12831.7 AHX11380.1 - 2.6e-09 36.9 0.0 4.6e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AHX11380.1 - 6.1e-08 32.8 0.6 0.0036 17.5 0.1 2.7 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 AHX11380.1 - 3e-07 29.9 2.3 8e-07 28.5 0.6 2.4 2 0 0 2 2 2 1 FAD binding domain NAD_binding_9 PF13454.6 AHX11380.1 - 3.6e-06 27.0 0.1 0.086 12.8 0.0 3.3 3 0 0 3 3 3 2 FAD-NAD(P)-binding DAO PF01266.24 AHX11380.1 - 1.7e-05 24.6 5.0 0.0017 18.0 0.2 3.8 4 0 0 4 4 4 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 AHX11380.1 - 3.4e-05 23.1 1.6 0.0047 16.0 0.3 3.2 2 2 1 3 3 3 1 Lycopene cyclase protein Trp_halogenase PF04820.14 AHX11380.1 - 5.4e-05 22.2 0.7 8.2e-05 21.6 0.1 1.7 2 0 0 2 2 2 1 Tryptophan halogenase AlaDh_PNT_C PF01262.21 AHX11380.1 - 0.00014 21.2 0.2 0.42 9.9 0.0 2.4 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 AHX11380.1 - 0.00019 20.8 2.4 0.0015 17.8 0.2 3.0 3 0 0 3 3 3 1 Thi4 family FAD_binding_3 PF01494.19 AHX11380.1 - 0.00034 20.0 1.1 0.012 14.9 0.1 2.3 2 0 0 2 2 2 1 FAD binding domain 3HCDH_N PF02737.18 AHX11380.1 - 0.00087 19.2 3.1 0.016 15.1 0.1 2.8 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 AHX11380.1 - 0.0054 17.2 0.2 2.8 8.4 0.0 2.7 2 1 0 2 2 2 1 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 AHX11380.1 - 0.0097 15.3 1.4 0.027 13.8 0.0 2.4 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K_oxygenase PF13434.6 AHX11380.1 - 0.018 14.2 0.0 0.16 11.1 0.0 2.1 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) XdhC_C PF13478.6 AHX11380.1 - 0.065 13.7 0.0 4.6 7.8 0.0 2.4 2 0 0 2 2 2 0 XdhC Rossmann domain UDPG_MGDP_dh_N PF03721.14 AHX11380.1 - 0.09 12.3 7.3 0.97 9.0 0.9 3.3 3 1 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 AHX11380.1 - 0.11 12.7 1.0 20 5.5 0.2 2.7 2 0 0 2 2 2 0 TrkA-N domain Amino_oxidase PF01593.24 AHX11380.1 - 0.14 11.5 0.0 0.4 9.9 0.0 1.7 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase CBS PF00571.28 AHX11382.1 - 7.5e-20 71.1 5.6 8.4e-09 35.8 0.9 4.1 4 0 0 4 4 4 2 CBS domain MgtE PF01769.16 AHX11382.1 - 2e-18 67.0 11.0 2e-18 67.0 11.0 2.1 3 0 0 3 3 3 1 Divalent cation transporter MgtE_N PF03448.17 AHX11382.1 - 1.5e-14 54.4 2.0 1.5e-14 54.4 2.0 2.5 2 1 0 2 2 2 1 MgtE intracellular N domain PMBR PF09373.10 AHX11382.1 - 0.094 12.9 0.0 1.4 9.2 0.0 2.8 2 0 0 2 2 2 0 Pseudomurein-binding repeat IF3_N PF05198.16 AHX11382.1 - 0.099 12.9 0.1 7 7.0 0.2 2.5 2 0 0 2 2 2 0 Translation initiation factor IF-3, N-terminal domain Phage_capsid PF05065.13 AHX11383.1 - 1.8e-54 184.9 0.0 2e-54 184.8 0.0 1.0 1 0 0 1 1 1 1 Phage capsid family UvrD_C PF13361.6 AHX11384.1 - 4.1e-19 69.2 4.8 5.4e-12 45.8 0.0 3.0 3 0 0 3 3 3 2 UvrD-like helicase C-terminal domain UvrD-helicase PF00580.21 AHX11384.1 - 1.1e-17 64.6 3.5 1.1e-17 64.6 3.5 2.9 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain UvrD_C_2 PF13538.6 AHX11384.1 - 2.4e-10 40.1 0.9 0.0008 19.2 0.0 2.5 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 AHX11384.1 - 2.4e-06 28.0 0.1 3.4e-05 24.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain PDDEXK_1 PF12705.7 AHX11384.1 - 8.8e-06 25.8 0.2 3.1e-05 24.0 0.2 1.9 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily AAA_12 PF13087.6 AHX11384.1 - 0.0003 20.4 0.1 0.0078 15.8 0.0 2.8 2 0 0 2 2 2 1 AAA domain DUF3884 PF13024.6 AHX11384.1 - 0.017 14.7 0.0 0.05 13.2 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) tRNA_Me_trans PF03054.16 AHX11387.1 - 9e-113 376.7 0.2 1e-112 376.5 0.2 1.0 1 0 0 1 1 1 1 tRNA methyl transferase QueC PF06508.13 AHX11387.1 - 1.4e-06 27.9 0.3 1.1e-05 25.0 0.3 2.2 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 AHX11387.1 - 5.1e-05 23.1 0.0 7.3e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.17 AHX11387.1 - 0.00033 19.9 0.1 0.012 14.8 0.2 2.3 2 1 0 2 2 2 1 NAD synthase ThiI PF02568.14 AHX11387.1 - 0.003 17.2 0.4 0.013 15.1 0.2 2.0 2 1 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.20 AHX11387.1 - 0.024 14.4 0.3 0.35 10.6 0.1 2.1 2 0 0 2 2 2 0 PP-loop family Arginosuc_synth PF00764.19 AHX11387.1 - 0.04 13.2 0.1 0.062 12.6 0.1 1.3 1 0 0 1 1 1 0 Arginosuccinate synthase RNase_T PF00929.24 AHX11388.1 - 2.1e-37 129.2 0.0 3e-37 128.7 0.0 1.2 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 AHX11388.1 - 1.5e-08 34.8 0.0 2.7e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 3' exoribonuclease, RNase T-like DNA_pol_A_exo1 PF01612.20 AHX11388.1 - 1.3e-06 28.2 0.0 0.00013 21.8 0.0 2.4 2 1 0 2 2 2 2 3'-5' exonuclease RNase_H_2 PF13482.6 AHX11388.1 - 0.00025 21.1 0.0 0.0011 18.9 0.0 1.9 1 1 0 1 1 1 1 RNase_H superfamily Peptidase_M24 PF00557.24 AHX11390.1 - 4.3e-46 157.3 0.0 6.2e-46 156.7 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N_2 PF16189.5 AHX11390.1 - 9.6e-26 90.8 0.0 2.1e-23 83.2 0.0 2.3 2 0 0 2 2 2 2 Creatinase/Prolidase N-terminal domain Creatinase_N PF01321.18 AHX11390.1 - 2.7e-11 44.2 0.0 8.5e-10 39.4 0.0 2.5 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain Peptidase_M24_C PF16188.5 AHX11390.1 - 3.3e-11 43.1 0.1 2.5e-10 40.2 0.0 2.4 2 0 0 2 2 2 1 C-terminal region of peptidase_M24 Hydrolase_4 PF12146.8 AHX11391.1 - 8.7e-17 61.2 0.0 6e-09 35.5 0.0 2.1 1 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 AHX11391.1 - 4.2e-09 36.4 0.0 1.3e-05 25.0 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 AHX11391.1 - 2.8e-05 23.7 0.0 9.9e-05 21.9 0.0 1.8 1 1 0 1 1 1 1 Prolyl oligopeptidase family UPF0227 PF05728.12 AHX11391.1 - 8.7e-05 22.5 0.0 0.00014 21.8 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) Peptidase_S15 PF02129.18 AHX11391.1 - 0.00052 19.7 0.0 0.88 9.1 0.0 2.2 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_6 PF12697.7 AHX11391.1 - 0.0031 18.2 0.0 0.021 15.4 0.0 2.0 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 AHX11391.1 - 0.0071 16.1 0.0 0.036 13.8 0.0 1.9 2 0 0 2 2 2 1 Alpha/beta hydrolase family DLH PF01738.18 AHX11391.1 - 0.029 13.9 0.0 0.99 8.9 0.0 2.2 2 0 0 2 2 2 0 Dienelactone hydrolase family DUF1007 PF06226.13 AHX11391.1 - 0.095 12.7 0.0 0.71 9.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1007) Abhydrolase_2 PF02230.16 AHX11391.1 - 0.1 12.4 0.0 1.4 8.6 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Cytochrom_C PF00034.21 AHX11392.1 - 8.4e-08 33.2 0.2 3.8e-07 31.1 0.2 2.0 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 AHX11392.1 - 0.004 17.4 0.9 0.019 15.3 0.9 2.0 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Formyl_trans_N PF00551.19 AHX11393.1 - 2.8e-47 160.8 0.1 6e-47 159.7 0.1 1.5 1 1 0 1 1 1 1 Formyl transferase Peptidase_M17 PF00883.21 AHX11394.1 - 2.1e-121 405.0 4.3 2.7e-121 404.7 4.3 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 AHX11394.1 - 2.6e-14 53.2 0.5 9.2e-14 51.4 0.0 2.2 2 0 0 2 2 2 1 Cytosol aminopeptidase family, N-terminal domain tRNA-synt_2 PF00152.20 AHX11395.1 - 4.6e-98 328.2 0.0 5.8e-98 327.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) GAD PF02938.14 AHX11395.1 - 3.8e-14 52.7 0.2 9.9e-14 51.3 0.0 1.8 2 0 0 2 2 2 1 GAD domain tRNA_anti-codon PF01336.25 AHX11395.1 - 8.4e-12 44.9 0.2 2.3e-11 43.5 0.1 1.8 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA-synt_2b PF00587.25 AHX11395.1 - 0.1 12.6 0.1 1.3 9.0 0.1 2.3 1 1 0 2 2 2 0 tRNA synthetase class II core domain (G, H, P, S and T) Mur_ligase_M PF08245.12 AHX11396.1 - 9.1e-33 113.9 0.0 2.1e-32 112.7 0.0 1.6 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 AHX11396.1 - 7.2e-11 42.2 0.0 2e-10 40.7 0.0 1.8 1 0 0 1 1 1 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 AHX11396.1 - 3.4e-09 36.9 0.0 8.2e-09 35.7 0.0 1.6 1 0 0 1 1 1 1 Mur ligase family, catalytic domain LpxD PF04613.14 AHX11396.1 - 0.025 14.3 0.1 0.046 13.5 0.1 1.4 1 0 0 1 1 1 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BPD_transp_1 PF00528.22 AHX11397.1 - 2.2e-18 66.7 25.9 4.9e-17 62.3 18.4 2.4 2 1 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component DUF3333 PF11812.8 AHX11397.1 - 0.00019 21.7 0.3 0.0011 19.2 0.3 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF3333) DUF1430 PF07242.11 AHX11397.1 - 0.027 14.7 2.3 0.027 14.7 2.3 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1430) DUF2626 PF11117.8 AHX11397.1 - 1.7 9.4 8.4 0.87 10.3 0.5 3.4 3 1 1 4 4 4 0 Protein of unknown function (DUF2626) ABC_tran PF00005.27 AHX11398.1 - 6.5e-31 107.7 0.0 9.6e-31 107.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AHX11398.1 - 5.4e-12 46.1 0.9 4.7e-06 26.6 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AHX11398.1 - 1.6e-05 24.4 0.2 0.0002 20.9 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AHX11398.1 - 9.7e-05 22.7 0.1 0.00051 20.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AHX11398.1 - 0.00021 21.0 0.0 0.00046 19.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 AHX11398.1 - 0.00028 20.7 0.9 0.028 14.1 0.3 2.1 1 1 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 AHX11398.1 - 0.0011 18.8 0.0 0.0025 17.8 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AHX11398.1 - 0.0026 18.3 0.1 0.0044 17.6 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AHX11398.1 - 0.0056 17.1 0.0 0.01 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 AHX11398.1 - 0.014 15.4 0.0 0.029 14.3 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 AHX11398.1 - 0.017 15.1 0.2 0.066 13.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) MMR_HSR1 PF01926.23 AHX11398.1 - 0.057 13.5 0.1 0.15 12.1 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase Rad60-SLD PF11976.8 AHX11398.1 - 0.065 13.1 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like AAA_33 PF13671.6 AHX11398.1 - 0.12 12.5 0.1 0.6 10.3 0.1 2.1 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 AHX11398.1 - 0.14 12.7 0.0 0.4 11.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 AHX11398.1 - 0.14 11.9 0.1 0.28 10.9 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.6 AHX11398.1 - 0.15 10.7 0.0 9.1 4.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 AHX11398.1 - 0.21 11.8 0.2 1.3 9.4 0.2 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MttA_Hcf106 PF02416.16 AHX11399.1 - 4.2e-14 51.6 0.9 4.4e-14 51.5 0.9 1.0 1 0 0 1 1 1 1 mttA/Hcf106 family DUF2206 PF09971.9 AHX11399.1 - 0.12 11.1 0.0 0.12 11.1 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) ThiG PF05690.14 AHX11400.1 - 3.5e-103 344.2 0.4 4e-103 344.0 0.4 1.0 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 AHX11400.1 - 0.00029 20.4 0.3 0.003 17.0 0.1 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein NanE PF04131.14 AHX11400.1 - 0.003 16.8 0.8 0.27 10.4 0.1 2.4 1 1 1 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase FMN_dh PF01070.18 AHX11400.1 - 0.011 14.8 0.1 0.015 14.4 0.1 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase DUF4907 PF16250.5 AHX11400.1 - 0.17 11.7 0.0 0.33 10.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4907) Dus PF01207.17 AHX11400.1 - 0.19 10.8 0.6 0.43 9.6 0.1 1.8 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) Pterin_bind PF00809.22 AHX11402.1 - 6.9e-55 186.4 0.0 7.8e-55 186.2 0.0 1.0 1 0 0 1 1 1 1 Pterin binding enzyme HPPK PF01288.20 AHX11403.1 - 2.1e-24 86.2 0.0 2.6e-24 85.9 0.0 1.1 1 0 0 1 1 1 1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) S-AdoMet_synt_C PF02773.16 AHX11404.1 - 2.1e-55 186.5 0.0 1.2e-54 184.1 0.0 2.0 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 AHX11404.1 - 4.1e-32 111.0 0.0 8.1e-32 110.0 0.0 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 AHX11404.1 - 9e-28 96.9 0.0 2.2e-27 95.6 0.0 1.6 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain HTH_28 PF13518.6 AHX11405.1 - 1.8e-05 24.8 0.0 2.3e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AHX11405.1 - 4.3e-05 22.8 0.0 6.1e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 AHX11405.1 - 0.00052 19.7 0.0 0.00075 19.2 0.0 1.2 1 0 0 1 1 1 1 Homeodomain-like domain HTH_40 PF14493.6 AHX11405.1 - 0.00064 20.1 0.0 0.00074 19.9 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 AHX11405.1 - 0.0015 18.5 0.0 0.0022 18.0 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix Terminase_5 PF06056.12 AHX11405.1 - 0.01 15.7 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_Tnp_1 PF01527.20 AHX11405.1 - 0.011 16.1 0.0 0.015 15.6 0.0 1.4 1 1 0 1 1 1 0 Transposase Fe_dep_repress PF01325.19 AHX11405.1 - 0.023 14.9 0.3 3.7 7.8 0.1 2.2 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_Tnp_4 PF13613.6 AHX11405.1 - 0.044 13.5 0.0 0.077 12.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease CENP-B_N PF04218.13 AHX11405.1 - 0.05 13.2 0.0 0.085 12.5 0.0 1.4 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Sec7_N PF12783.7 AHX11405.1 - 0.054 13.4 0.3 0.081 12.8 0.2 1.3 1 1 0 1 1 1 0 Guanine nucleotide exchange factor in Golgi transport N-terminal HTH_psq PF05225.16 AHX11405.1 - 0.071 12.9 0.0 0.41 10.4 0.0 2.0 2 0 0 2 2 2 0 helix-turn-helix, Psq domain HTH_17 PF12728.7 AHX11405.1 - 0.1 12.8 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain YbaB_DNA_bd PF02575.16 AHX11406.1 - 9.7e-22 77.0 1.0 1.2e-21 76.8 1.0 1.1 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family DNA_pol3_delta2 PF13177.6 AHX11407.1 - 7.5e-42 142.9 0.2 1.2e-41 142.2 0.2 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit DNA_pol3_gamma3 PF12169.8 AHX11407.1 - 1.2e-14 54.5 0.0 4.4e-08 33.1 0.0 2.3 1 1 1 2 2 2 2 DNA polymerase III subunits gamma and tau domain III AAA PF00004.29 AHX11407.1 - 6.2e-11 42.8 0.0 2.3e-10 41.0 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 AHX11407.1 - 2.5e-06 27.3 0.1 0.00021 21.1 0.0 2.4 1 1 1 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 AHX11407.1 - 2.2e-05 24.7 0.0 0.00022 21.5 0.0 2.5 1 1 0 1 1 1 1 AAA domain DNA_pol3_delta PF06144.13 AHX11407.1 - 6.3e-05 22.8 0.1 0.00013 21.8 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_5 PF07728.14 AHX11407.1 - 6.9e-05 22.9 0.1 0.00051 20.1 0.0 2.4 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_assoc_2 PF16193.5 AHX11407.1 - 0.00049 20.4 0.2 0.028 14.8 0.2 2.7 1 1 0 1 1 1 1 AAA C-terminal domain AAA_30 PF13604.6 AHX11407.1 - 0.0015 18.3 0.1 0.007 16.1 0.0 2.1 2 1 0 2 2 2 1 AAA domain Rep_fac_C PF08542.11 AHX11407.1 - 0.0018 18.7 0.1 0.0067 16.8 0.0 2.1 2 0 0 2 2 1 1 Replication factor C C-terminal domain AAA_19 PF13245.6 AHX11407.1 - 0.0051 17.2 0.1 0.054 13.8 0.1 2.3 1 1 0 1 1 1 1 AAA domain Bac_DnaA PF00308.18 AHX11407.1 - 0.0078 16.1 1.3 0.083 12.7 1.0 2.3 2 0 0 2 2 2 1 Bacterial dnaA protein AAA_24 PF13479.6 AHX11407.1 - 0.019 14.7 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 AHX11407.1 - 0.027 14.5 0.0 0.071 13.1 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TIP49 PF06068.13 AHX11407.1 - 0.027 13.7 1.1 3.1 6.9 0.1 2.3 1 1 1 2 2 2 0 TIP49 P-loop domain TIP49_C PF17856.1 AHX11407.1 - 0.03 14.5 0.5 0.11 12.7 0.5 2.1 1 0 0 1 1 1 0 TIP49 AAA-lid domain Sigma54_activat PF00158.26 AHX11407.1 - 0.066 12.9 0.1 1.4 8.5 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain DEAD PF00270.29 AHX11407.1 - 0.083 12.7 0.3 2.7 7.7 0.0 2.5 1 1 0 2 2 2 0 DEAD/DEAH box helicase ResIII PF04851.15 AHX11407.1 - 0.097 12.7 0.0 3.4 7.7 0.0 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Haem_oxygenas_2 PF14518.6 AHX11408.1 - 1e-29 103.5 0.0 1.3e-29 103.3 0.0 1.1 1 0 0 1 1 1 1 Iron-containing redox enzyme TENA_THI-4 PF03070.16 AHX11408.1 - 8.6e-27 94.3 0.6 1.1e-26 94.0 0.6 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family DUF4041 PF13250.6 AHX11408.1 - 0.012 15.5 0.1 0.025 14.4 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) HSP90 PF00183.18 AHX11410.1 - 1.5e-103 347.5 9.7 7.8e-102 341.8 7.2 2.1 1 1 1 2 2 2 2 Hsp90 protein HATPase_c_3 PF13589.6 AHX11410.1 - 3.5e-13 49.5 0.1 8.4e-13 48.3 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 AHX11410.1 - 2.2e-11 44.3 0.1 8.5e-11 42.4 0.2 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Styelin PF17562.2 AHX11410.1 - 0.0063 16.8 2.2 0.0086 16.4 0.1 2.4 2 0 0 2 2 2 1 Styelin Bactofilin PF04519.13 AHX11412.1 - 0.0014 18.8 9.3 0.22 11.8 2.7 2.4 1 1 1 2 2 2 2 Polymer-forming cytoskeletal ScsC_N PF18312.1 AHX11412.1 - 0.013 15.3 13.7 27 4.7 0.0 6.0 6 0 0 6 6 6 0 Copper resistance protein ScsC N-terminal domain TssO PF17561.2 AHX11412.1 - 0.056 13.6 1.3 0.19 11.9 0.0 2.3 2 1 0 2 2 2 0 Type VI secretion system, TssO BCA_ABC_TP_C PF12399.8 AHX11412.1 - 1.9 8.5 3.7 3.8e+02 1.2 0.0 4.6 5 0 0 5 5 5 0 Branched-chain amino acid ATP-binding cassette transporter CN_hydrolase PF00795.22 AHX11413.1 - 5.7e-25 88.1 0.0 7.9e-25 87.7 0.0 1.2 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase AsmA PF05170.14 AHX11414.1 - 7.4e-12 44.9 17.3 1.1e-10 41.0 3.6 3.8 4 1 0 4 4 4 3 AsmA family AsmA_2 PF13502.6 AHX11414.1 - 1.2e-08 34.8 8.4 4.6e-07 29.6 3.3 3.1 3 0 0 3 3 3 2 AsmA-like C-terminal region RibD_C PF01872.17 AHX11415.1 - 2.1e-33 115.9 0.0 2.7e-33 115.5 0.0 1.1 1 0 0 1 1 1 1 RibD C-terminal domain dCMP_cyt_deam_1 PF00383.23 AHX11415.1 - 4.5e-19 68.2 0.0 8.6e-19 67.3 0.0 1.5 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Inv-AAD PF18785.1 AHX11415.1 - 1.3e-10 41.2 0.8 4.3e-10 39.5 0.1 2.2 3 1 0 3 3 3 1 Invertebrate-AID/APOBEC-deaminase MafB19-deam PF14437.6 AHX11415.1 - 9.7e-08 31.9 0.0 1.8e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 MafB19-like deaminase DUF655 PF04919.12 AHX11415.1 - 0.013 15.5 0.1 0.029 14.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF655) DNA_ligase_aden PF01653.18 AHX11416.1 - 3e-91 305.8 0.0 4.4e-91 305.3 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent DNA ligase adenylation domain DNA_ligase_OB PF03120.16 AHX11416.1 - 2.3e-30 104.3 2.3 3.1e-30 103.9 0.8 2.0 2 0 0 2 2 2 1 NAD-dependent DNA ligase OB-fold domain BRCT PF00533.26 AHX11416.1 - 5.2e-13 49.2 0.1 8.7e-12 45.3 0.0 2.9 3 0 0 3 3 3 1 BRCA1 C Terminus (BRCT) domain DNA_ligase_ZBD PF03119.16 AHX11416.1 - 2.8e-08 33.6 0.9 5.7e-08 32.6 0.9 1.6 1 0 0 1 1 1 1 NAD-dependent DNA ligase C4 zinc finger domain HHH_2 PF12826.7 AHX11416.1 - 3.4e-08 33.5 0.1 2.3e-07 30.8 0.1 2.4 1 1 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 AHX11416.1 - 4.7e-05 23.9 0.0 0.019 15.6 0.0 2.8 2 0 0 2 2 2 1 Helix-hairpin-helix domain PTCB-BRCT PF12738.7 AHX11416.1 - 0.0006 19.7 0.0 0.002 18.0 0.0 1.9 2 0 0 2 2 2 1 twin BRCT domain 5_3_exonuc PF01367.20 AHX11416.1 - 0.0024 18.4 0.9 0.13 12.9 0.0 3.1 3 0 0 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold FolB PF02152.18 AHX11417.1 - 4.2e-09 36.9 0.1 5e-09 36.7 0.1 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase HSM3_N PF18795.1 AHX11417.1 - 0.011 15.2 1.8 0.017 14.5 1.7 1.4 1 1 0 1 1 1 0 DNA mismatch repair protein HSM3, N terminal domain CPSase_sm_chain PF00988.22 AHX11418.1 - 4.2e-39 133.3 0.0 7.4e-39 132.5 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 AHX11418.1 - 6.4e-36 123.9 0.1 9.7e-36 123.3 0.1 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 AHX11418.1 - 3.1e-07 30.4 0.6 0.00011 22.1 0.6 2.3 1 1 0 1 1 1 1 Peptidase C26 Ribosomal_L31 PF01197.18 AHX11419.1 - 4.8e-15 55.5 0.1 5.7e-15 55.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L31 CBM65_1 PF18259.1 AHX11419.1 - 0.058 13.5 0.0 0.064 13.4 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate binding module 65 domain 1 HAGH_C PF16123.5 AHX11420.1 - 1.3e-21 76.9 0.7 1.9e-21 76.3 0.7 1.3 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 AHX11420.1 - 1.4e-14 54.6 3.9 7.6e-14 52.2 3.9 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 AHX11420.1 - 5.9e-05 23.0 0.0 9.4e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 AHX11420.1 - 0.00014 21.4 0.9 0.00029 20.4 0.7 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_5 PF14597.6 AHX11420.1 - 0.00036 20.1 0.0 0.00047 19.7 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Dak1 PF02733.17 AHX11420.1 - 0.23 10.3 0.0 0.34 9.7 0.0 1.1 1 0 0 1 1 1 0 Dak1 domain DUF1013 PF06242.11 AHX11421.1 - 6.3e-50 168.8 0.1 9.5e-50 168.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1013) DUF2773 PF10971.8 AHX11421.1 - 0.095 12.8 0.4 0.91 9.7 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2773) tRNA-synt_1 PF00133.22 AHX11422.1 - 2.2e-65 221.1 0.1 4.8e-20 71.3 0.2 6.0 2 1 3 5 5 5 5 tRNA synthetases class I (I, L, M and V) tRNA-synt_1_2 PF13603.6 AHX11422.1 - 1.4e-51 174.7 0.0 9e-51 172.0 0.0 2.1 1 1 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1g PF09334.11 AHX11422.1 - 7.6e-32 110.5 0.0 2.7e-21 75.8 0.0 4.1 3 1 1 4 4 4 4 tRNA synthetases class I (M) Anticodon_1 PF08264.13 AHX11422.1 - 7e-09 35.8 0.4 3.2e-08 33.7 0.2 2.2 2 1 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 AHX11422.1 - 1.6e-08 34.3 0.1 0.0056 16.1 0.0 2.7 2 1 1 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 AHX11422.1 - 1.6e-05 24.0 0.0 0.036 13.0 0.1 3.2 4 0 0 4 4 4 2 tRNA synthetases class I (K) tRNA-synt_1d PF00750.19 AHX11422.1 - 0.0018 17.3 0.0 0.0034 16.4 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (R) Lar_restr_allev PF14354.6 AHX11422.1 - 0.15 12.5 1.0 14 6.1 0.5 2.6 2 0 0 2 2 2 0 Restriction alleviation protein Lar HTH_3 PF01381.22 AHX11424.1 - 2.6e-11 43.4 0.2 3.9e-11 42.8 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AHX11424.1 - 2.5e-10 40.2 0.1 5.3e-10 39.2 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 AHX11424.1 - 2e-09 37.8 0.0 2.9e-09 37.2 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Phage_CI_repr PF07022.13 AHX11424.1 - 2.3e-05 24.4 0.0 3.8e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Bacteriophage CI repressor helix-turn-helix domain HTH_31 PF13560.6 AHX11424.1 - 0.00015 22.0 0.0 0.00023 21.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 AHX11424.1 - 0.00078 19.4 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 AHX11424.1 - 0.028 14.3 0.0 0.13 12.2 0.0 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB YdaS_antitoxin PF15943.5 AHX11424.1 - 0.074 12.9 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Peptidase_S24 PF00717.23 AHX11424.1 - 0.1 12.6 0.2 0.24 11.4 0.2 1.7 1 1 0 1 1 1 0 Peptidase S24-like HTH_10 PF04967.12 AHX11424.1 - 0.1 12.4 0.1 7.4 6.5 0.0 2.3 1 1 1 2 2 2 0 HTH DNA binding domain HTH_23 PF13384.6 AHX11424.1 - 0.15 11.9 0.0 5.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain Cytochrom_C_asm PF01578.20 AHX11425.1 - 4.6e-25 88.6 21.0 4.6e-25 88.6 21.0 2.0 2 0 0 2 2 2 2 Cytochrome C assembly protein OTCace_N PF02729.21 AHX11426.1 - 3.7e-32 111.4 0.0 5.8e-32 110.8 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 AHX11426.1 - 1.4e-22 80.4 0.0 3.4e-22 79.2 0.0 1.6 1 1 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DUF1622 PF07784.11 AHX11426.1 - 0.02 14.8 0.2 0.057 13.3 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1622) UDPG_MGDP_dh_C PF03720.15 AHX11426.1 - 0.056 13.9 0.0 0.097 13.1 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SIS PF01380.22 AHX11428.1 - 1.2e-40 138.4 0.6 3.1e-20 72.4 0.1 2.4 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 AHX11428.1 - 3.1e-18 66.2 0.0 5.5e-18 65.5 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 AHX11428.1 - 1.6e-12 47.4 0.1 4e-12 46.1 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.6 AHX11428.1 - 0.002 17.1 0.0 0.0038 16.2 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferases class-II CspB_prodomain PF18425.1 AHX11428.1 - 0.028 14.4 0.1 0.2 11.7 0.1 2.3 2 0 0 2 2 2 0 Csp protease B prodomain GGDEF PF00990.21 AHX11429.1 - 6.7e-46 156.0 0.3 2e-45 154.4 0.2 1.9 2 0 0 2 2 2 1 Diguanylate cyclase, GGDEF domain Response_reg PF00072.24 AHX11429.1 - 8.8e-33 112.8 6.4 3.2e-27 94.9 0.3 2.9 3 0 0 3 3 3 2 Response regulator receiver domain NOG1 PF06858.14 AHX11429.1 - 0.048 13.4 1.6 1.2 8.9 0.0 2.9 3 0 0 3 3 3 0 Nucleolar GTP-binding protein 1 (NOG1) Bac_GDH PF05088.12 AHX11431.1 - 0 1779.0 0.1 0 1778.8 0.1 1.0 1 0 0 1 1 1 1 Bacterial NAD-glutamate dehydrogenase ELFV_dehydrog PF00208.21 AHX11431.1 - 5.8e-05 22.9 0.1 0.00019 21.3 0.0 1.9 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Chalcone PF02431.15 AHX11431.1 - 0.066 12.6 1.4 1.7 8.0 0.1 3.0 3 0 0 3 3 3 0 Chalcone-flavanone isomerase tRNA-synt_1c PF00749.21 AHX11434.1 - 1.5e-60 204.8 0.0 2.4e-60 204.1 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain MNHE PF01899.16 AHX11435.1 - 0.00055 19.7 0.0 0.00055 19.7 0.0 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit KIX_2 PF16987.5 AHX11436.1 - 0.056 13.4 2.1 0.06 13.3 0.3 1.8 2 0 0 2 2 2 0 KIX domain Ribonuc_red_sm PF00268.21 AHX11437.1 - 1.6e-57 195.1 6.3 1.9e-57 194.9 6.3 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain KH_5 PF13184.6 AHX11439.1 - 6.8e-27 93.4 7.0 2.4e-25 88.4 0.2 3.5 4 0 0 4 4 4 2 NusA-like KH domain NusA_N PF08529.11 AHX11439.1 - 1.9e-18 67.0 1.1 4.5e-18 65.8 0.3 2.1 2 0 0 2 2 2 1 NusA N-terminal domain KH_2 PF07650.17 AHX11439.1 - 2.2e-08 33.8 1.6 4.2e-06 26.5 0.2 3.2 1 1 1 2 2 2 1 KH domain HHH_5 PF14520.6 AHX11439.1 - 3.3e-06 27.6 2.7 0.0035 17.9 0.0 3.5 5 0 0 5 5 5 2 Helix-hairpin-helix domain KH_1 PF00013.29 AHX11439.1 - 1e-05 25.2 0.1 0.26 11.1 0.0 2.8 2 0 0 2 2 2 2 KH domain DUF4332 PF14229.6 AHX11439.1 - 0.00014 22.1 0.1 0.25 11.6 0.0 3.1 3 0 0 3 3 3 2 Domain of unknown function (DUF4332) KH_4 PF13083.6 AHX11439.1 - 0.0015 18.3 0.1 0.0087 15.9 0.0 2.3 2 0 0 2 2 2 1 KH domain Sep15_SelM PF08806.11 AHX11439.1 - 0.01 16.0 0.1 0.032 14.4 0.1 2.0 1 0 0 1 1 1 1 Sep15/SelM redox domain S1 PF00575.23 AHX11439.1 - 0.061 13.7 0.2 0.22 11.9 0.2 2.0 1 0 0 1 1 1 0 S1 RNA binding domain FlbD PF06289.11 AHX11439.1 - 8 6.2 7.2 1.6 8.4 0.1 3.5 4 0 0 4 4 4 0 Flagellar and Swarming motility proteins GTP_EFTU PF00009.27 AHX11440.1 - 3.6e-32 111.5 15.5 6.7e-31 107.3 9.9 3.4 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 AHX11440.1 - 1.2e-24 86.4 2.1 4.4e-24 84.6 2.1 2.1 1 0 0 1 1 1 1 Translation-initiation factor 2 MMR_HSR1 PF01926.23 AHX11440.1 - 5.3e-11 42.6 0.5 1.5e-10 41.2 0.5 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 AHX11440.1 - 1.4e-09 38.1 1.3 8.3e-07 29.3 0.1 3.1 2 0 0 2 2 2 2 Elongation factor Tu domain 2 SRPRB PF09439.10 AHX11440.1 - 1.3e-06 28.0 0.6 8.1e-06 25.4 0.6 2.2 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 AHX11440.1 - 7e-05 22.4 2.5 0.00027 20.5 2.5 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B Arf PF00025.21 AHX11440.1 - 7.2e-05 22.3 1.4 0.0002 20.9 0.3 2.1 2 0 0 2 2 2 1 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 AHX11440.1 - 0.00096 19.1 1.2 0.0032 17.4 0.4 2.3 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain Roc PF08477.13 AHX11440.1 - 0.0014 18.8 0.1 0.0036 17.5 0.1 1.7 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase PduV-EutP PF10662.9 AHX11440.1 - 0.0022 17.7 0.7 0.0067 16.2 0.7 1.8 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 AHX11440.1 - 0.0051 16.7 6.6 0.15 11.9 1.0 2.6 1 1 1 2 2 2 2 RsgA GTPase SIS_2 PF13580.6 AHX11440.1 - 0.053 13.5 0.2 0.13 12.2 0.2 1.7 1 0 0 1 1 1 0 SIS domain Dynamin_N PF00350.23 AHX11440.1 - 0.39 10.8 7.5 0.6 10.2 0.0 3.4 3 1 1 4 4 4 0 Dynamin family RBFA PF02033.18 AHX11441.1 - 1.7e-07 31.6 0.4 2.1e-07 31.3 0.4 1.1 1 0 0 1 1 1 1 Ribosome-binding factor A DUF4906 PF16249.5 AHX11441.1 - 0.039 13.8 0.5 0.043 13.7 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4906) PDDEXK_1 PF12705.7 AHX11442.1 - 6e-19 68.9 0.0 1.2e-18 68.0 0.0 1.5 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily AAA_14 PF13173.6 AHX11442.1 - 1.4 9.0 4.2 12 5.9 0.0 3.5 3 1 1 4 4 4 0 AAA domain IMPDH PF00478.25 AHX11443.1 - 2e-138 461.1 5.9 2.2e-138 461.0 5.9 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 AHX11443.1 - 1.2e-21 76.9 2.2 2.8e-10 40.5 0.0 3.3 3 0 0 3 3 3 2 CBS domain FMN_dh PF01070.18 AHX11443.1 - 8.3e-14 51.4 3.2 9.5e-14 51.2 2.4 1.5 2 0 0 2 2 2 1 FMN-dependent dehydrogenase NMO PF03060.15 AHX11443.1 - 4.6e-11 42.7 2.9 4e-08 33.0 2.5 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase His_biosynth PF00977.21 AHX11443.1 - 3e-07 30.1 2.1 0.00041 19.9 0.1 2.4 2 0 0 2 2 2 2 Histidine biosynthesis protein Glu_synthase PF01645.17 AHX11443.1 - 4.3e-06 26.1 3.8 8.1e-06 25.2 3.8 1.4 1 0 0 1 1 1 1 Conserved region in glutamate synthase Dus PF01207.17 AHX11443.1 - 2.2e-05 23.7 1.4 0.04 13.0 0.1 2.2 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NanE PF04131.14 AHX11443.1 - 4.9e-05 22.6 2.3 0.00012 21.4 2.3 1.6 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase G3P_antiterm PF04309.12 AHX11443.1 - 0.00044 19.7 1.6 0.21 11.0 0.1 2.6 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator Ribul_P_3_epim PF00834.19 AHX11443.1 - 0.014 14.8 0.2 0.041 13.3 0.2 1.8 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family DHO_dh PF01180.21 AHX11443.1 - 0.016 14.5 0.4 0.016 14.5 0.4 2.1 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase UDPGP PF01704.18 AHX11443.1 - 0.016 13.9 0.0 0.029 13.0 0.0 1.3 1 0 0 1 1 1 0 UTP--glucose-1-phosphate uridylyltransferase Methyltransf_24 PF13578.6 AHX11443.1 - 0.019 15.9 0.1 0.04 14.9 0.1 1.5 1 0 0 1 1 1 0 Methyltransferase domain ThiG PF05690.14 AHX11443.1 - 0.028 13.7 2.7 0.042 13.2 0.3 2.2 2 1 0 2 2 2 0 Thiazole biosynthesis protein ThiG CSTF2_hinge PF14327.6 AHX11444.1 - 0.0057 17.1 0.1 0.65 10.5 0.0 2.6 2 0 0 2 2 2 1 Hinge domain of cleavage stimulation factor subunit 2 DUF948 PF06103.11 AHX11444.1 - 0.07 13.4 0.6 0.65 10.3 0.1 2.7 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) IMPDH PF00478.25 AHX11445.1 - 5.9e-11 41.9 0.0 6.5e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain UDPGP PF01704.18 AHX11445.1 - 0.0028 16.4 0.0 0.0028 16.4 0.0 1.0 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase DUF1307 PF06998.11 AHX11445.1 - 0.057 13.4 0.0 0.06 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) Baculo_PEP_C PF04513.12 AHX11446.1 - 0.37 10.8 6.5 1.8 8.6 3.2 2.5 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus T7SS_ESX_EspC PF10824.8 AHX11446.1 - 0.85 10.1 3.5 31 5.1 0.2 2.8 2 0 0 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm MlaD PF02470.20 AHX11447.1 - 7e-18 64.7 0.1 9.3e-18 64.3 0.1 1.2 1 0 0 1 1 1 1 MlaD protein YajC PF02699.15 AHX11447.1 - 3 7.8 5.6 22 5.0 5.6 2.0 1 1 0 1 1 1 0 Preprotein translocase subunit NDUFA12 PF05071.16 AHX11448.1 - 2.5e-11 44.3 0.0 2.7e-11 44.2 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase subunit NDUFA12 DUF3085 PF11284.8 AHX11448.1 - 0.12 12.7 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3085) DNA_pol_A_exo1 PF01612.20 AHX11449.1 - 1.2e-34 119.5 0.0 1.5e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 3'-5' exonuclease RecA PF00154.21 AHX11450.1 - 4e-139 462.5 2.3 4.8e-139 462.2 2.3 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Rad51 PF08423.11 AHX11450.1 - 2e-15 56.8 0.6 4.4e-15 55.6 0.6 1.5 1 1 0 1 1 1 1 Rad51 ATPase PF06745.13 AHX11450.1 - 3.7e-11 42.8 3.1 1.9e-08 34.0 3.1 2.9 1 1 0 1 1 1 1 KaiC AAA_24 PF13479.6 AHX11450.1 - 7e-05 22.6 0.0 0.00013 21.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 AHX11450.1 - 0.00016 21.7 0.1 0.00042 20.3 0.0 1.8 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_25 PF13481.6 AHX11450.1 - 0.00081 19.0 0.5 0.024 14.2 0.5 2.2 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 AHX11450.1 - 0.0066 17.0 0.1 0.012 16.1 0.1 1.8 1 1 0 1 1 1 1 ABC transporter DnaB_C PF03796.15 AHX11450.1 - 0.01 15.2 0.0 0.029 13.7 0.0 1.9 2 1 0 2 2 2 0 DnaB-like helicase C terminal domain AAA PF00004.29 AHX11450.1 - 0.011 16.2 0.0 0.029 14.8 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AHX11450.1 - 0.019 15.4 0.1 0.029 14.7 0.1 1.2 1 0 0 1 1 1 0 AAA ATPase domain CobU PF02283.16 AHX11450.1 - 0.025 14.2 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_14 PF13173.6 AHX11450.1 - 0.043 13.8 0.0 0.16 12.0 0.0 2.0 1 1 0 1 1 1 0 AAA domain MobB PF03205.14 AHX11450.1 - 0.043 13.7 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_22 PF13401.6 AHX11450.1 - 0.045 14.0 0.0 0.094 13.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_35 PF14516.6 AHX11450.1 - 0.049 12.5 0.0 0.083 11.7 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain PAXNEB PF05625.11 AHX11450.1 - 0.13 11.4 0.3 0.23 10.5 0.3 1.3 1 0 0 1 1 1 0 PAXNEB protein HATPase_c PF02518.26 AHX11451.1 - 1.3e-13 51.4 0.3 3.3e-13 50.1 0.3 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AHX11451.1 - 1.4e-06 28.2 0.0 3.9e-06 26.8 0.0 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.6 AHX11451.1 - 0.0011 19.0 0.0 0.0023 17.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain TssO PF17561.2 AHX11451.1 - 0.03 14.5 1.0 0.89 9.6 0.2 2.6 2 0 0 2 2 2 0 Type VI secretion system, TssO HATPase_c_3 PF13589.6 AHX11451.1 - 0.035 13.9 0.3 0.14 12.0 0.1 2.0 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Fer2_3 PF13085.6 AHX11452.1 - 1.7e-32 111.6 0.0 3.2e-32 110.8 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 AHX11452.1 - 4.5e-09 36.7 3.6 4.5e-09 36.7 3.6 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 AHX11452.1 - 9.9e-08 32.0 2.7 9.9e-08 32.0 2.7 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 AHX11452.1 - 2.3e-07 31.2 6.4 2.3e-07 31.2 6.4 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer2 PF00111.27 AHX11452.1 - 0.0071 16.3 0.2 0.0071 16.3 0.2 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_9 PF13187.6 AHX11452.1 - 0.021 15.0 7.0 0.021 15.0 7.0 2.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 AHX11452.1 - 0.071 13.3 4.1 0.26 11.5 0.1 2.9 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 AHX11452.1 - 0.097 13.3 14.9 0.05 14.2 8.2 3.0 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 AHX11452.1 - 0.22 12.5 7.2 4.1 8.4 0.7 2.9 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain DnaJ_C PF01556.18 AHX11455.1 - 1.7e-39 135.3 0.0 2.2e-39 134.9 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 AHX11455.1 - 6.6e-28 96.6 8.7 2.5e-27 94.8 6.8 2.4 2 0 0 2 2 2 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 AHX11455.1 - 1.9e-09 37.7 22.1 3.5e-09 36.9 22.1 1.5 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 AHX11455.1 - 0.54 10.3 20.9 0.88 9.6 0.4 3.3 1 1 2 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein MMR_HSR1 PF01926.23 AHX11456.1 - 2.6e-44 149.9 1.8 5.6e-21 74.8 0.3 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase KH_dom-like PF14714.6 AHX11456.1 - 3.6e-20 72.0 0.3 1.2e-19 70.4 0.3 1.9 1 0 0 1 1 1 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FeoB_N PF02421.18 AHX11456.1 - 6.8e-20 71.2 0.6 2.1e-09 37.1 0.1 2.5 2 1 0 2 2 2 2 Ferrous iron transport protein B Roc PF08477.13 AHX11456.1 - 2e-16 60.3 1.9 7.7e-09 35.8 0.1 3.8 3 1 0 3 3 3 2 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 AHX11456.1 - 1.9e-15 56.9 1.3 1.8e-07 30.9 0.3 2.9 2 1 0 2 2 2 2 Ras family AIG1 PF04548.16 AHX11456.1 - 2.8e-09 36.6 3.2 1.9e-05 24.1 0.1 2.7 2 1 1 3 3 3 2 AIG1 family RsgA_GTPase PF03193.16 AHX11456.1 - 2.5e-08 34.0 4.8 0.00077 19.4 0.1 3.6 2 1 1 3 3 3 2 RsgA GTPase Dynamin_N PF00350.23 AHX11456.1 - 3e-08 33.9 9.9 0.074 13.1 0.0 4.9 4 1 1 5 5 5 3 Dynamin family SRPRB PF09439.10 AHX11456.1 - 5.6e-08 32.4 2.9 1e-05 25.1 0.2 3.3 3 1 0 3 3 3 1 Signal recognition particle receptor beta subunit Arf PF00025.21 AHX11456.1 - 5.8e-08 32.4 6.2 0.00015 21.3 0.8 3.7 2 2 0 2 2 2 2 ADP-ribosylation factor family GTP_EFTU PF00009.27 AHX11456.1 - 5.4e-07 29.3 3.5 0.14 11.7 0.1 4.6 2 2 1 3 3 3 2 Elongation factor Tu GTP binding domain AAA_24 PF13479.6 AHX11456.1 - 7.7e-06 25.8 0.0 0.01 15.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain PduV-EutP PF10662.9 AHX11456.1 - 1.1e-05 25.2 2.3 0.25 11.1 0.0 4.2 4 0 0 4 4 4 1 Ethanolamine utilisation - propanediol utilisation MMR_HSR1_Xtn PF16897.5 AHX11456.1 - 0.00014 21.8 1.1 0.011 15.7 0.2 2.6 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain TniB PF05621.11 AHX11456.1 - 0.00034 20.1 0.1 0.36 10.2 0.0 2.4 2 0 0 2 2 2 2 Bacterial TniB protein RNA_helicase PF00910.22 AHX11456.1 - 0.00035 20.9 0.0 1.3 9.5 0.0 2.6 2 0 0 2 2 2 2 RNA helicase ABC_tran PF00005.27 AHX11456.1 - 0.00045 20.7 0.3 1.1 9.8 0.0 2.9 2 1 0 2 2 2 2 ABC transporter MeaB PF03308.16 AHX11456.1 - 0.00082 18.4 0.1 0.045 12.7 0.0 2.6 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Ploopntkinase3 PF18751.1 AHX11456.1 - 0.0011 18.9 0.0 2.2 8.2 0.0 2.5 2 0 0 2 2 2 2 P-loop Nucleotide Kinase3 Septin PF00735.18 AHX11456.1 - 0.0012 18.2 1.3 0.22 10.8 0.1 2.9 3 0 0 3 3 3 1 Septin AAA_14 PF13173.6 AHX11456.1 - 0.0034 17.4 0.3 3.3 7.7 0.1 2.9 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 AHX11456.1 - 0.0043 16.3 1.3 1.3 8.2 0.8 2.9 2 1 0 2 2 2 1 NB-ARC domain AAA_22 PF13401.6 AHX11456.1 - 0.0049 17.2 0.7 5.4 7.3 0.0 3.3 1 1 2 3 3 3 1 AAA domain AAA_18 PF13238.6 AHX11456.1 - 0.0071 16.9 1.9 4.5 7.8 0.0 3.4 3 1 1 4 4 3 1 AAA domain AAA_28 PF13521.6 AHX11456.1 - 0.0099 16.1 0.0 2.5 8.3 0.0 2.7 3 0 0 3 3 2 1 AAA domain AAA_29 PF13555.6 AHX11456.1 - 0.02 14.7 0.1 7.7 6.3 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain NTPase_1 PF03266.15 AHX11456.1 - 0.17 11.8 7.5 7 6.5 0.1 3.9 4 0 0 4 4 4 0 NTPase ATP_bind_1 PF03029.17 AHX11456.1 - 0.23 11.2 1.9 51 3.5 0.0 4.0 4 1 0 5 5 5 0 Conserved hypothetical ATP binding protein NOG1 PF06858.14 AHX11456.1 - 0.25 11.2 4.6 1.7 8.5 0.1 3.5 4 0 0 4 4 4 0 Nucleolar GTP-binding protein 1 (NOG1) tRNA-synt_1 PF00133.22 AHX11457.1 - 4.5e-184 613.1 2.6 6.5e-184 612.5 2.6 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 AHX11457.1 - 1.2e-25 90.3 0.1 2.8e-25 89.1 0.1 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 AHX11457.1 - 4.7e-14 51.9 3.5 9.6e-06 24.6 0.1 4.0 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 AHX11457.1 - 0.0065 15.9 0.0 0.016 14.6 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 AHX11457.1 - 0.023 14.2 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 Pribosyltran PF00156.27 AHX11458.1 - 3.8e-11 42.8 0.2 6.5e-11 42.0 0.2 1.3 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 AHX11458.1 - 0.1 12.0 0.1 0.2 11.1 0.1 1.6 1 1 0 1 1 1 0 Uracil phosphoribosyltransferase SRP54 PF00448.22 AHX11460.1 - 6e-63 212.0 0.4 1e-62 211.3 0.4 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 AHX11460.1 - 1.2e-24 86.8 1.1 5.8e-24 84.6 0.2 2.4 2 0 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.19 AHX11460.1 - 7.5e-17 61.3 1.0 3.9e-16 59.0 1.0 2.3 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 AHX11460.1 - 5.2e-05 23.3 0.8 0.00014 21.9 0.1 2.1 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 AHX11460.1 - 0.00035 20.9 0.2 0.00094 19.5 0.0 1.7 2 0 0 2 2 1 1 AAA domain AAA_31 PF13614.6 AHX11460.1 - 0.00054 19.9 5.7 0.1 12.5 0.5 2.8 1 1 1 2 2 2 2 AAA domain FlgM PF04316.13 AHX11460.1 - 0.0032 17.8 0.0 0.014 15.7 0.0 2.1 1 0 0 1 1 1 1 Anti-sigma-28 factor, FlgM AAA_17 PF13207.6 AHX11460.1 - 0.0039 17.6 0.0 0.011 16.2 0.0 1.8 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 AHX11460.1 - 0.0044 16.3 0.0 0.0088 15.3 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin ParA PF10609.9 AHX11460.1 - 0.0079 15.7 0.1 0.019 14.4 0.1 1.6 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 AHX11460.1 - 0.0083 15.3 4.0 0.35 10.0 0.2 2.7 1 1 1 2 2 2 2 Anion-transporting ATPase ResIII PF04851.15 AHX11460.1 - 0.0087 16.1 0.4 0.026 14.5 0.1 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_15 PF13175.6 AHX11460.1 - 0.017 14.8 0.0 0.033 13.9 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 AHX11460.1 - 0.021 14.9 0.0 0.047 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AHX11460.1 - 0.031 14.7 0.2 0.13 12.7 0.1 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 AHX11460.1 - 0.034 14.3 0.0 0.084 13.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 AHX11460.1 - 0.041 13.0 0.3 0.26 10.4 0.0 1.9 1 1 0 2 2 2 0 G-protein alpha subunit AAA_16 PF13191.6 AHX11460.1 - 0.047 14.1 0.0 0.091 13.1 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 AHX11460.1 - 0.052 14.1 0.1 0.15 12.7 0.1 1.9 1 1 0 1 1 1 0 AAA domain Roc PF08477.13 AHX11460.1 - 0.087 13.1 0.0 0.24 11.6 0.0 1.8 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_7 PF12775.7 AHX11460.1 - 0.1 12.1 0.2 0.47 10.0 0.0 2.1 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_25 PF13481.6 AHX11460.1 - 0.19 11.3 1.9 0.73 9.4 1.8 2.0 1 1 0 1 1 1 0 AAA domain RDD PF06271.12 AHX11462.1 - 1.6e-16 60.8 2.6 2.4e-16 60.2 2.6 1.3 1 0 0 1 1 1 1 RDD family Methyltransf_12 PF08242.12 AHX11463.1 - 7.1e-14 52.4 0.2 1.8e-13 51.1 0.2 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AHX11463.1 - 8.5e-14 51.6 2.1 4.2e-13 49.4 0.7 2.3 2 1 1 3 3 3 1 Methyltransferase domain Methyltransf_23 PF13489.6 AHX11463.1 - 3.5e-13 49.7 0.0 5.2e-13 49.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AHX11463.1 - 8.4e-12 45.7 0.1 2e-11 44.4 0.1 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AHX11463.1 - 2.9e-11 43.9 0.1 7.3e-11 42.6 0.1 1.7 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AHX11463.1 - 4.7e-07 29.5 0.0 7.7e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 AHX11463.1 - 2.7e-06 26.9 0.1 3.9e-06 26.4 0.1 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TPR_19 PF14559.6 AHX11463.1 - 2.1e-05 25.0 0.0 4.1e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat Methyltransf_16 PF10294.9 AHX11463.1 - 0.00026 20.8 0.1 0.00046 20.0 0.1 1.4 1 0 0 1 1 1 1 Lysine methyltransferase TPR_2 PF07719.17 AHX11463.1 - 0.002 18.1 0.0 0.19 11.9 0.0 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat Methyltransf_PK PF05891.12 AHX11463.1 - 0.0022 17.6 0.0 0.0033 17.0 0.0 1.2 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase MetW PF07021.12 AHX11463.1 - 0.0055 16.3 0.1 0.015 14.9 0.1 1.7 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW TehB PF03848.14 AHX11463.1 - 0.0079 15.6 0.1 0.016 14.7 0.1 1.4 1 0 0 1 1 1 1 Tellurite resistance protein TehB TPR_6 PF13174.6 AHX11463.1 - 0.0091 16.6 0.0 0.032 14.9 0.0 2.0 2 0 0 2 2 1 1 Tetratricopeptide repeat NodS PF05401.11 AHX11463.1 - 0.01 15.5 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) PrmA PF06325.13 AHX11463.1 - 0.041 13.3 0.3 0.062 12.7 0.3 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 AHX11463.1 - 0.045 13.5 0.1 0.095 12.4 0.1 1.4 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TPR_8 PF13181.6 AHX11463.1 - 0.091 13.0 0.2 1.2 9.5 0.0 2.8 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 AHX11463.1 - 0.099 13.1 0.7 0.58 10.7 0.1 2.6 4 0 0 4 4 1 0 Tetratricopeptide repeat NMO PF03060.15 AHX11464.1 - 1.4e-39 136.4 0.0 2.1e-37 129.3 0.0 2.0 1 1 0 1 1 1 1 Nitronate monooxygenase ThiG PF05690.14 AHX11464.1 - 2.3e-05 23.8 0.3 3.4e-05 23.3 0.3 1.2 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 AHX11464.1 - 4.8e-05 22.5 0.7 0.037 13.0 0.3 2.4 1 1 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.21 AHX11464.1 - 0.0009 18.8 0.0 0.003 17.0 0.0 1.8 1 1 0 2 2 2 1 Histidine biosynthesis protein LpxI_N PF17930.1 AHX11464.1 - 0.0021 18.0 0.0 0.0048 16.8 0.0 1.6 1 0 0 1 1 1 1 LpxI N-terminal domain DHO_dh PF01180.21 AHX11464.1 - 0.0035 16.6 0.1 0.0049 16.1 0.1 1.2 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase FMN_dh PF01070.18 AHX11464.1 - 0.15 11.0 0.4 0.32 10.0 0.4 1.5 1 1 0 1 1 1 0 FMN-dependent dehydrogenase SRP54 PF00448.22 AHX11466.1 - 4.5e-69 232.0 0.3 7.2e-69 231.4 0.3 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 AHX11466.1 - 1.9e-08 34.4 2.6 1.9e-08 34.4 2.6 2.8 3 0 0 3 3 3 1 SRP54-type protein, helical bundle domain Zeta_toxin PF06414.12 AHX11466.1 - 1.5e-06 27.7 0.0 2.5e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_30 PF13604.6 AHX11466.1 - 8.3e-06 25.6 0.0 1.7e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AHX11466.1 - 2.7e-05 24.5 0.0 6.1e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 AHX11466.1 - 6e-05 22.2 0.2 0.00015 20.9 0.1 1.7 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 AHX11466.1 - 8e-05 22.7 0.0 0.00041 20.4 0.0 2.1 1 1 1 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 AHX11466.1 - 0.00031 20.3 0.3 0.002 17.7 0.2 2.2 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_31 PF13614.6 AHX11466.1 - 0.0013 18.7 3.0 0.0061 16.5 0.1 2.6 2 1 1 3 3 3 1 AAA domain GT-D PF08759.11 AHX11466.1 - 0.0027 17.4 0.1 0.12 12.0 0.0 2.3 2 0 0 2 2 2 1 Glycosyltransferase GT-D fold NTPase_1 PF03266.15 AHX11466.1 - 0.0033 17.3 0.4 0.67 9.8 0.1 2.5 2 0 0 2 2 2 1 NTPase AAA_25 PF13481.6 AHX11466.1 - 0.0066 16.0 0.2 0.035 13.7 0.2 2.1 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 AHX11466.1 - 0.0093 15.9 0.1 0.017 15.0 0.1 1.4 1 0 0 1 1 1 1 NACHT domain Thymidylate_kin PF02223.17 AHX11466.1 - 0.014 15.1 0.7 0.074 12.7 0.1 2.3 3 0 0 3 3 3 0 Thymidylate kinase APS_kinase PF01583.20 AHX11466.1 - 0.016 15.1 0.0 0.043 13.7 0.0 1.7 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA PF00004.29 AHX11466.1 - 0.016 15.6 0.3 0.056 13.9 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF2481 PF10654.9 AHX11466.1 - 0.018 15.0 0.0 0.034 14.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) AAA_33 PF13671.6 AHX11466.1 - 0.018 15.2 0.0 0.033 14.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 AHX11466.1 - 0.022 14.3 0.1 0.062 12.8 0.0 1.8 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_17 PF13207.6 AHX11466.1 - 0.023 15.1 0.1 0.067 13.6 0.0 1.8 2 0 0 2 2 1 0 AAA domain DUF815 PF05673.13 AHX11466.1 - 0.023 13.9 0.2 0.032 13.4 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) cobW PF02492.19 AHX11466.1 - 0.023 14.3 1.1 0.12 12.0 1.1 2.0 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 AHX11466.1 - 0.03 14.8 0.0 0.062 13.8 0.0 1.6 1 0 0 1 1 1 0 ABC transporter KTI12 PF08433.10 AHX11466.1 - 0.041 13.3 0.4 0.094 12.2 0.0 1.7 2 1 0 2 2 2 0 Chromatin associated protein KTI12 ArsA_ATPase PF02374.15 AHX11466.1 - 0.06 12.5 1.9 0.21 10.8 0.1 2.3 3 0 0 3 3 3 0 Anion-transporting ATPase Helicase_RecD PF05127.14 AHX11466.1 - 0.062 13.1 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Helicase SWI2_SNF2 PF18766.1 AHX11466.1 - 0.063 12.9 0.1 0.18 11.4 0.0 1.7 1 1 1 2 2 2 0 SWI2/SNF2 ATPase AAA_14 PF13173.6 AHX11466.1 - 0.071 13.1 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 AHX11466.1 - 0.073 12.8 0.1 0.35 10.6 0.1 2.1 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein adh_short PF00106.25 AHX11466.1 - 0.081 12.4 0.3 0.63 9.5 0.3 2.1 1 1 0 1 1 1 0 short chain dehydrogenase DUF5394 PF17372.2 AHX11466.1 - 0.73 9.3 4.1 1.3 8.5 4.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5394) FtsJ PF01728.19 AHX11467.1 - 2.5e-50 171.1 0.0 3e-50 170.8 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltrans_Mon PF14314.6 AHX11467.1 - 7.7e-05 20.9 0.0 0.00065 17.9 0.0 1.9 2 0 0 2 2 2 1 Virus-capping methyltransferase Methyltr_RsmB-F PF01189.17 AHX11467.1 - 0.00033 20.4 0.0 0.00078 19.1 0.0 1.6 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Fibrillarin PF01269.17 AHX11467.1 - 0.0016 17.6 0.0 0.074 12.2 0.0 2.1 2 0 0 2 2 2 1 Fibrillarin Methyltransf_31 PF13847.6 AHX11467.1 - 0.002 17.9 0.1 0.013 15.3 0.1 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AHX11467.1 - 0.0038 17.1 0.0 0.011 15.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 AHX11467.1 - 0.053 13.3 0.0 0.077 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 AHX11467.1 - 0.12 13.0 0.1 1.2 9.8 0.1 2.6 1 1 1 2 2 2 0 Methyltransferase domain Thymidylate_kin PF02223.17 AHX11468.1 - 5.8e-41 140.2 0.0 7.3e-41 139.9 0.0 1.1 1 0 0 1 1 1 1 Thymidylate kinase AAA_28 PF13521.6 AHX11468.1 - 4.2e-07 30.3 0.0 5.1e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AHX11468.1 - 0.00095 19.4 0.0 0.0019 18.5 0.0 1.5 2 0 0 2 2 2 1 AAA domain dNK PF01712.19 AHX11468.1 - 0.011 15.6 0.1 5.1 6.9 0.1 2.8 2 1 0 2 2 2 0 Deoxynucleoside kinase AAA_18 PF13238.6 AHX11468.1 - 0.052 14.1 0.0 0.82 10.2 0.0 2.2 2 1 0 2 2 2 0 AAA domain PPK2 PF03976.14 AHX11468.1 - 0.06 12.8 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 Polyphosphate kinase 2 (PPK2) MeaB PF03308.16 AHX11468.1 - 0.073 12.0 0.0 0.51 9.3 0.0 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_33 PF13671.6 AHX11468.1 - 0.084 13.0 0.0 0.27 11.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain 2-oxoacid_dh PF00198.23 AHX11469.1 - 3.6e-81 272.0 0.0 4.8e-81 271.6 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 AHX11469.1 - 1.5e-20 72.8 1.2 4.1e-20 71.4 1.2 1.8 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 AHX11469.1 - 7.4e-08 32.6 0.1 1.4e-07 31.7 0.1 1.5 1 0 0 1 1 1 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 AHX11469.1 - 9.5e-06 25.4 1.0 0.0042 16.9 0.0 3.4 2 1 1 3 3 3 1 Biotin-lipoyl like HlyD_D23 PF16576.5 AHX11469.1 - 0.0029 16.8 0.0 0.035 13.3 0.0 2.2 1 1 1 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion PYNP_C PF07831.13 AHX11469.1 - 0.059 13.0 0.3 32 4.3 0.0 3.3 2 1 1 3 3 3 0 Pyrimidine nucleoside phosphorylase C-terminal domain PmbA_TldD PF01523.16 AHX11470.1 - 3.6e-38 132.0 0.2 5.1e-38 131.5 0.2 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase SCO1-SenC PF02630.14 AHX11471.1 - 8.2e-40 135.8 0.0 1e-39 135.5 0.0 1.1 1 0 0 1 1 1 1 SCO1/SenC AhpC-TSA PF00578.21 AHX11471.1 - 0.00051 19.9 0.0 0.00074 19.4 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family RinB PF06116.12 AHX11471.1 - 0.012 15.7 1.2 0.034 14.2 0.1 2.3 3 0 0 3 3 3 0 Transcriptional activator RinB DnaB_C PF03796.15 AHX11472.1 - 6.8e-98 327.1 0.6 6.8e-98 327.1 0.6 1.9 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain DnaB PF00772.21 AHX11472.1 - 2.3e-27 95.1 1.0 6e-27 93.7 1.0 1.8 1 0 0 1 1 1 1 DnaB-like helicase N terminal domain AAA_25 PF13481.6 AHX11472.1 - 1.7e-11 44.1 0.0 3e-11 43.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 AHX11472.1 - 4.8e-07 29.3 0.9 1e-06 28.3 0.1 2.0 2 0 0 2 2 2 1 KaiC Rad51 PF08423.11 AHX11472.1 - 0.00015 21.1 0.1 0.0016 17.8 0.0 2.1 2 0 0 2 2 2 1 Rad51 RecA PF00154.21 AHX11472.1 - 0.0018 17.8 0.0 0.0035 16.8 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA PF00004.29 AHX11472.1 - 0.031 14.7 2.4 2.5 8.5 0.1 2.9 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) FemAB_like PF04339.12 AHX11472.1 - 0.053 12.6 0.0 2.5 7.1 0.0 2.2 2 0 0 2 2 2 0 Peptidogalycan biosysnthesis/recognition IstB_IS21 PF01695.17 AHX11472.1 - 0.084 12.6 0.1 0.47 10.2 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein MMR_HSR1 PF01926.23 AHX11472.1 - 0.22 11.6 0.9 7.8 6.6 0.9 3.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF2175 PF09943.9 AHX11472.1 - 3.6 7.9 5.3 30 5.0 0.9 3.1 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2175) Peptidase_S78 PF04586.17 AHX11474.1 - 5.3e-14 52.7 0.0 5.7e-14 52.6 0.0 1.0 1 0 0 1 1 1 1 Caudovirus prohead serine protease SseC PF04888.12 AHX11475.1 - 0.023 14.3 5.6 5.4 6.5 0.0 2.1 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family EphA2_TM PF14575.6 AHX11475.1 - 0.084 13.8 0.0 0.17 12.8 0.0 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain PSII_Pbs27 PF13326.6 AHX11475.1 - 0.21 11.9 1.7 0.56 10.5 0.6 2.1 2 0 0 2 2 2 0 Photosystem II Pbs27 GlutR_dimer PF00745.20 AHX11475.1 - 0.26 11.7 2.4 23 5.5 0.7 3.0 2 1 1 3 3 3 0 Glutamyl-tRNAGlu reductase, dimerisation domain GMP_synt_C PF00958.22 AHX11475.1 - 0.28 11.3 1.6 20 5.3 0.0 3.2 3 0 0 3 3 3 0 GMP synthase C terminal domain Laminin_I PF06008.14 AHX11475.1 - 0.53 9.9 5.8 2 8.1 1.8 2.2 2 0 0 2 2 2 0 Laminin Domain I SAA PF00277.18 AHX11475.1 - 1.2 9.6 3.9 2.6 8.6 1.8 2.4 1 1 1 2 2 2 0 Serum amyloid A protein Chlorosome_CsmC PF11098.8 AHX11475.1 - 2.2 8.2 9.9 5.6 7.0 0.1 2.5 2 1 0 2 2 2 0 Chlorosome envelope protein C GLYCAM-1 PF05242.11 AHX11475.1 - 3.9 7.6 9.7 0.69 10.0 3.9 2.4 2 1 0 2 2 2 0 Glycosylation-dependent cell adhesion molecule 1 (GlyCAM-1) PseudoU_synth_2 PF00849.22 AHX11476.1 - 3.8e-31 108.3 0.0 6.5e-31 107.6 0.0 1.4 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 AHX11476.1 - 0.00017 21.2 0.0 0.00037 20.1 0.0 1.6 1 0 0 1 1 1 1 S4 domain Pyr_redox_2 PF07992.14 AHX11477.1 - 7.7e-51 173.1 0.0 8.8e-51 172.9 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AHX11477.1 - 3.2e-21 75.9 0.0 1e-16 61.1 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AHX11477.1 - 5.6e-19 68.5 0.8 1.1e-14 54.7 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AHX11477.1 - 5.4e-12 45.5 0.5 1.3e-05 24.5 0.4 4.0 4 0 0 4 4 4 3 Glucose inhibited division protein A FAD_binding_2 PF00890.24 AHX11477.1 - 3.3e-10 39.6 6.0 4.5e-07 29.3 2.6 3.6 4 0 0 4 4 4 2 FAD binding domain DAO PF01266.24 AHX11477.1 - 1.6e-09 37.8 3.2 0.0044 16.6 2.0 3.4 4 0 0 4 4 4 3 FAD dependent oxidoreductase FAD_oxidored PF12831.7 AHX11477.1 - 1.7e-08 34.2 7.7 1.1e-07 31.5 1.2 2.6 3 0 0 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.14 AHX11477.1 - 1.6e-07 30.4 0.5 0.0012 17.7 0.5 3.4 3 0 0 3 3 3 2 HI0933-like protein Thi4 PF01946.17 AHX11477.1 - 2.4e-06 27.0 0.2 0.0045 16.3 0.6 2.4 2 0 0 2 2 2 2 Thi4 family NAD_binding_8 PF13450.6 AHX11477.1 - 1.3e-05 25.3 0.4 0.00044 20.4 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 AHX11477.1 - 1.9e-05 23.9 1.1 0.0054 15.8 1.0 2.9 2 1 1 3 3 3 1 Lycopene cyclase protein NAD_binding_7 PF13241.6 AHX11477.1 - 0.00018 21.9 0.0 0.23 11.9 0.0 2.3 2 0 0 2 2 2 2 Putative NAD(P)-binding FAD_binding_3 PF01494.19 AHX11477.1 - 0.00093 18.5 0.7 0.034 13.4 0.5 2.1 2 0 0 2 2 2 1 FAD binding domain FMO-like PF00743.19 AHX11477.1 - 0.0073 14.8 0.0 0.21 10.0 0.0 2.1 2 0 0 2 2 2 1 Flavin-binding monooxygenase-like Shikimate_DH PF01488.20 AHX11477.1 - 0.016 15.3 0.1 0.26 11.3 0.0 2.3 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_9 PF13454.6 AHX11477.1 - 0.027 14.5 0.1 5.9 6.9 0.0 3.2 4 0 0 4 4 4 0 FAD-NAD(P)-binding K_oxygenase PF13434.6 AHX11477.1 - 0.035 13.3 0.3 0.11 11.6 0.0 1.9 2 1 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 AHX11477.1 - 0.14 11.4 0.9 1.2 8.4 0.8 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 AHX11477.1 - 0.18 10.6 0.9 1.6 7.5 0.5 2.0 2 0 0 2 2 2 0 Tryptophan halogenase AhpC-TSA PF00578.21 AHX11478.1 - 4.5e-32 110.6 0.0 5.6e-32 110.3 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.9 AHX11478.1 - 5.6e-10 38.9 0.0 9.7e-10 38.1 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.10 AHX11478.1 - 1.2e-09 38.0 0.0 1.4e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Redoxin FTSW_RODA_SPOVE PF01098.19 AHX11479.1 - 3e-80 269.9 27.9 3.6e-80 269.7 27.9 1.0 1 0 0 1 1 1 1 Cell cycle protein NDK PF00334.19 AHX11480.1 - 2.2e-52 176.7 0.0 2.4e-52 176.5 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase MurJ PF03023.14 AHX11482.1 - 4.8e-92 308.9 46.8 5.7e-92 308.7 46.8 1.1 1 0 0 1 1 1 1 Lipid II flippase MurJ Polysacc_synt_C PF14667.6 AHX11482.1 - 9.4e-14 51.7 18.4 9.4e-14 51.7 18.4 3.9 3 1 0 4 4 4 1 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 AHX11482.1 - 6.5e-07 29.1 11.1 6.5e-07 29.1 11.1 3.9 3 1 1 4 4 4 2 MatE Proton_antipo_M PF00361.20 AHX11483.1 - 6.5e-54 183.1 28.6 6.5e-54 183.1 28.6 1.8 2 1 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 AHX11483.1 - 1.2e-06 28.4 0.8 8.7e-06 25.7 0.2 2.9 1 1 0 1 1 1 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TPR_21 PF09976.9 AHX11486.1 - 0.0054 16.5 0.1 0.055 13.2 0.0 1.9 1 1 1 2 2 2 1 Tetratricopeptide repeat-like domain HEAT PF02985.22 AHX11486.1 - 0.03 14.6 0.2 2.5 8.6 0.0 3.2 2 1 1 3 3 3 0 HEAT repeat Complex1_49kDa PF00346.19 AHX11487.1 - 2.1e-122 407.5 0.0 2.6e-122 407.2 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 AHX11487.1 - 0.034 13.0 0.0 0.056 12.3 0.0 1.3 1 0 0 1 1 1 0 Nickel-dependent hydrogenase tRNA-synt_2b PF00587.25 AHX11488.1 - 1.6e-31 109.6 0.0 2.9e-31 108.8 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 AHX11488.1 - 1.1e-11 44.9 2.9 1.8e-11 44.2 2.9 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain IPPT PF01715.17 AHX11489.1 - 1.9e-40 139.1 0.0 2.5e-40 138.7 0.0 1.1 1 0 0 1 1 1 1 IPP transferase IPT PF01745.16 AHX11489.1 - 1.3e-05 24.8 0.2 0.0022 17.4 0.0 2.2 2 0 0 2 2 2 2 Isopentenyl transferase IstB_IS21 PF01695.17 AHX11489.1 - 0.012 15.3 0.0 0.022 14.5 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_22 PF13401.6 AHX11489.1 - 0.024 14.9 0.0 0.21 11.9 0.0 2.3 1 1 1 2 2 2 0 AAA domain Vhr1 PF04001.13 AHX11489.1 - 0.035 14.4 0.1 0.067 13.5 0.1 1.4 1 0 0 1 1 1 0 Transcription factor Vhr1 LEH PF07858.12 AHX11489.1 - 0.056 13.6 0.0 0.14 12.3 0.0 1.6 2 0 0 2 2 2 0 Limonene-1,2-epoxide hydrolase catalytic domain T2SSE PF00437.20 AHX11489.1 - 0.07 12.2 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein SnoaL_2 PF12680.7 AHX11489.1 - 0.099 13.3 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 SnoaL-like domain AAA_33 PF13671.6 AHX11489.1 - 0.14 12.3 0.0 0.33 11.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 AHX11489.1 - 0.15 11.5 0.0 0.32 10.4 0.0 1.6 1 1 0 1 1 1 0 Bacterial TniB protein Cytochrom_C_asm PF01578.20 AHX11492.1 - 8.9e-38 130.2 20.0 8.9e-38 130.2 20.0 4.1 3 1 0 3 3 3 1 Cytochrome C assembly protein CcmF_C PF16327.5 AHX11492.1 - 1.5e-26 93.4 6.0 2.1e-26 93.0 4.6 1.9 1 1 1 2 2 2 1 Cytochrome c-type biogenesis protein CcmF C-terminal DUF962 PF06127.11 AHX11492.1 - 0.21 11.7 5.2 13 5.9 0.8 4.1 2 2 1 3 3 3 0 Protein of unknown function (DUF962) DUF5379 PF17350.2 AHX11493.1 - 0.035 14.4 0.3 0.12 12.6 0.3 2.0 1 0 0 1 1 1 0 Family of unknown function (DUF5379) DUF2207 PF09972.9 AHX11493.1 - 0.35 9.6 0.6 3.7 6.2 0.1 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Amastin PF07344.11 AHX11493.1 - 1.1 9.0 10.1 0.99 9.2 1.7 2.5 3 0 0 3 3 3 0 Amastin surface glycoprotein Peptidase_S11 PF00768.20 AHX11494.1 - 2.9e-60 203.7 2.2 4e-60 203.2 2.2 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 AHX11494.1 - 3.8e-11 43.0 0.0 5.4e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family PBP5_C PF07943.13 AHX11494.1 - 4e-08 33.4 0.2 1.6e-07 31.4 0.0 2.0 2 0 0 2 2 2 1 Penicillin-binding protein 5, C-terminal domain RuvA_N PF01330.21 AHX11495.1 - 2e-18 66.2 4.0 7.2e-17 61.2 0.8 2.6 2 1 1 3 3 3 2 RuvA N terminal domain RuvA_C PF07499.13 AHX11495.1 - 3.4e-11 43.4 0.5 1.3e-10 41.6 0.1 2.1 2 0 0 2 2 2 1 RuvA, C-terminal domain HHH_5 PF14520.6 AHX11495.1 - 1.5e-06 28.7 3.0 2.9e-06 27.8 1.9 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix domain TusA PF01206.17 AHX11495.1 - 0.035 13.9 0.0 0.48 10.3 0.0 2.3 2 0 0 2 2 2 0 Sulfurtransferase TusA UBA_6 PF18039.1 AHX11495.1 - 0.08 12.9 0.1 2.7 8.0 0.0 2.7 1 1 1 2 2 2 0 UBA-like domain HHH_6 PF14579.6 AHX11495.1 - 0.091 13.0 0.1 0.32 11.3 0.0 1.9 2 1 0 2 2 2 0 Helix-hairpin-helix motif RuvB_N PF05496.12 AHX11496.1 - 4.5e-77 257.2 0.1 6.5e-77 256.7 0.1 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain RuvB_C PF05491.13 AHX11496.1 - 3.2e-26 91.0 0.4 1.2e-25 89.1 0.0 2.2 3 0 0 3 3 2 1 RuvB C-terminal winged helix domain AAA_lid_4 PF17864.1 AHX11496.1 - 1e-24 86.1 0.2 1.8e-24 85.3 0.2 1.4 1 0 0 1 1 1 1 RuvB AAA lid domain AAA PF00004.29 AHX11496.1 - 6.8e-20 71.8 0.0 1.6e-19 70.6 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AHX11496.1 - 3e-08 33.8 0.1 5.7e-06 26.4 0.1 2.5 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 AHX11496.1 - 4.3e-06 27.2 0.1 0.00039 20.9 0.0 2.6 2 1 1 3 3 3 1 AAA ATPase domain Mg_chelatase PF01078.21 AHX11496.1 - 9.5e-06 25.1 0.6 0.048 13.0 0.0 3.3 1 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 AHX11496.1 - 4.7e-05 22.8 0.0 0.00035 19.9 0.0 2.0 2 0 0 2 2 2 1 TIP49 P-loop domain Sigma54_activat PF00158.26 AHX11496.1 - 7.3e-05 22.5 0.0 0.13 12.0 0.0 2.3 1 1 0 2 2 2 2 Sigma-54 interaction domain AAA_14 PF13173.6 AHX11496.1 - 0.0002 21.4 0.1 0.0021 18.1 0.0 2.5 2 1 1 3 3 3 1 AAA domain RNA_helicase PF00910.22 AHX11496.1 - 0.00021 21.6 0.0 0.00039 20.8 0.0 1.4 1 0 0 1 1 1 1 RNA helicase NB-ARC PF00931.22 AHX11496.1 - 0.00024 20.4 0.0 0.038 13.2 0.0 2.6 3 0 0 3 3 3 1 NB-ARC domain NTPase_1 PF03266.15 AHX11496.1 - 0.0003 20.7 0.1 0.0087 16.0 0.0 2.4 1 1 1 2 2 2 1 NTPase DUF815 PF05673.13 AHX11496.1 - 0.00034 19.8 0.0 0.072 12.2 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 AHX11496.1 - 0.00074 19.8 0.2 0.096 13.0 0.0 2.6 1 1 1 2 2 2 1 AAA domain ResIII PF04851.15 AHX11496.1 - 0.001 19.1 0.0 0.62 10.0 0.0 2.4 1 1 0 2 2 2 1 Type III restriction enzyme, res subunit MCM PF00493.23 AHX11496.1 - 0.0028 16.8 0.0 0.092 11.8 0.0 2.3 1 1 0 1 1 1 1 MCM P-loop domain Rad17 PF03215.15 AHX11496.1 - 0.0033 17.4 0.0 0.0054 16.7 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain IstB_IS21 PF01695.17 AHX11496.1 - 0.0035 17.1 0.1 0.13 12.0 0.1 2.8 2 1 0 2 2 2 1 IstB-like ATP binding protein AAA_3 PF07726.11 AHX11496.1 - 0.0046 16.8 0.0 0.63 9.9 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Bac_DnaA PF00308.18 AHX11496.1 - 0.0051 16.7 0.2 0.059 13.2 0.2 2.4 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_18 PF13238.6 AHX11496.1 - 0.0075 16.8 0.0 0.035 14.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 AHX11496.1 - 0.049 14.1 0.0 0.094 13.2 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_24 PF13479.6 AHX11496.1 - 0.068 12.9 0.1 0.18 11.5 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_7 PF12775.7 AHX11496.1 - 0.07 12.6 0.0 0.2 11.2 0.0 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region NACHT PF05729.12 AHX11496.1 - 0.071 13.0 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_17 PF13207.6 AHX11496.1 - 0.087 13.2 0.0 0.25 11.8 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA_33 PF13671.6 AHX11496.1 - 0.17 12.1 0.0 0.33 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 AHX11496.1 - 0.18 11.8 0.0 0.34 10.9 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_19 PF13245.6 AHX11496.1 - 0.19 12.1 0.2 8.2 6.8 0.0 2.6 1 1 1 2 2 2 0 AAA domain Transket_pyr PF02779.24 AHX11498.1 - 2.2e-58 196.9 0.0 6.2e-58 195.4 0.0 1.8 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain E1_dh PF00676.20 AHX11498.1 - 1.3e-49 168.8 0.0 2e-49 168.2 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component OxoGdeHyase_C PF16870.5 AHX11498.1 - 7e-41 139.5 0.0 1.1e-40 138.8 0.0 1.3 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal 2-oxogl_dehyd_N PF16078.5 AHX11498.1 - 6.5e-06 25.6 0.3 1.7e-05 24.3 0.3 1.6 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase N-terminus Sua5_yciO_yrdC PF01300.18 AHX11499.1 - 8.6e-44 149.2 0.0 9.6e-44 149.0 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination Haemagg_act PF05860.13 AHX11499.1 - 0.0086 16.0 0.2 0.013 15.4 0.2 1.2 1 0 0 1 1 1 1 haemagglutination activity domain Clusterin PF01093.17 AHX11499.1 - 0.019 14.0 0.0 0.023 13.8 0.0 1.1 1 0 0 1 1 1 0 Clusterin Lactamase_B_2 PF12706.7 AHX11500.1 - 4.1e-26 91.8 0.0 4.8e-26 91.5 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 AHX11500.1 - 3.2e-08 33.8 0.0 6.7e-08 32.8 0.0 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Fe-S_assembly PF04384.13 AHX11501.1 - 1.1e-28 99.6 0.6 1.2e-28 99.4 0.6 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster assembly PsbP PF01789.16 AHX11501.1 - 0.18 11.9 0.0 0.18 11.9 0.0 1.0 1 0 0 1 1 1 0 PsbP Ribosomal_S4 PF00163.19 AHX11502.1 - 4.8e-15 56.2 0.4 7.6e-15 55.6 0.4 1.3 1 0 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain S4 PF01479.25 AHX11502.1 - 7.7e-14 51.1 0.1 1.3e-13 50.4 0.1 1.4 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 AHX11502.1 - 0.045 13.6 0.0 0.072 12.9 0.0 1.3 1 0 0 1 1 1 0 S4 domain Dala_Dala_lig_C PF07478.13 AHX11503.1 - 3.1e-22 79.1 0.0 4.2e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 AHX11503.1 - 6.2e-16 58.7 0.2 7.9e-15 55.2 0.2 2.2 1 1 0 1 1 1 1 D-ala D-ala ligase N-terminus ATP-grasp_3 PF02655.14 AHX11503.1 - 6.3e-07 29.6 0.1 4.9e-06 26.7 0.0 2.3 1 1 1 2 2 2 1 ATP-grasp domain CPSase_L_D2 PF02786.17 AHX11503.1 - 0.0087 15.6 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain TTL PF03133.15 AHX11503.1 - 0.014 14.5 0.0 0.15 11.2 0.0 1.9 2 0 0 2 2 2 0 Tubulin-tyrosine ligase family ATPgrasp_Ter PF15632.6 AHX11503.1 - 0.027 14.2 0.0 0.12 12.1 0.0 1.9 1 1 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon DUF1444 PF07285.11 AHX11503.1 - 0.037 13.6 0.0 0.047 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1444) ATPgrasp_ST PF14397.6 AHX11503.1 - 0.052 12.8 0.0 0.085 12.1 0.0 1.3 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp POTRA_1 PF08478.10 AHX11504.1 - 6.8e-09 35.9 0.1 5e-08 33.1 0.1 2.2 2 0 0 2 2 2 1 POTRA domain, FtsQ-type FtsQ PF03799.15 AHX11504.1 - 2.3e-08 34.9 0.1 4.5e-08 33.9 0.1 1.5 1 0 0 1 1 1 1 Cell division protein FtsQ GTP_cyclohydroI PF01227.22 AHX11506.1 - 9e-44 149.0 0.0 9.9e-44 148.9 0.0 1.1 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.6 AHX11506.1 - 0.0025 17.9 0.0 0.0039 17.3 0.0 1.3 1 0 0 1 1 1 1 QueF-like protein ATP-synt PF00231.19 AHX11507.1 - 6.2e-60 203.3 0.0 6.9e-60 203.1 0.0 1.0 1 0 0 1 1 1 1 ATP synthase KASH_CCD PF14662.6 AHX11508.1 - 0.01 15.7 5.0 0.01 15.7 5.0 3.3 2 1 1 3 3 3 0 Coiled-coil region of CCDC155 or KASH YicC_N PF03755.13 AHX11508.1 - 0.011 16.2 0.4 0.032 14.7 0.4 1.8 1 0 0 1 1 1 0 YicC-like family, N-terminal region HMMR_N PF15905.5 AHX11508.1 - 0.014 14.9 15.4 0.24 10.9 4.7 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal Fez1 PF06818.15 AHX11508.1 - 0.027 14.9 11.5 0.049 14.1 2.8 2.5 3 0 0 3 3 3 0 Fez1 Filament PF00038.21 AHX11508.1 - 0.03 13.9 16.9 3.1 7.3 14.9 3.6 1 1 1 2 2 2 0 Intermediate filament protein SlyX PF04102.12 AHX11508.1 - 0.18 12.4 6.5 0.78 10.4 0.0 3.8 2 2 1 3 3 3 0 SlyX GAS PF13851.6 AHX11508.1 - 0.92 8.8 12.6 0.54 9.6 5.5 3.1 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding CENP-F_leu_zip PF10473.9 AHX11508.1 - 1.2 9.1 20.3 3.4 7.7 1.8 3.8 1 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1664 PF07889.12 AHX11508.1 - 1.7 8.7 9.0 11 6.1 0.5 3.5 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 AHX11508.1 - 2.4 8.6 4.9 10 6.7 0.3 3.6 2 2 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) TMF_TATA_bd PF12325.8 AHX11508.1 - 4.5 7.5 15.5 0.19 12.0 1.4 3.5 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding DUF16 PF01519.16 AHX11508.1 - 5.8 7.5 14.1 1.8 9.1 0.6 2.9 1 1 0 2 2 2 0 Protein of unknown function DUF16 MurB_C PF02873.16 AHX11509.1 - 9.4e-27 93.5 0.0 1.7e-26 92.7 0.0 1.4 1 0 0 1 1 1 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FAD_binding_4 PF01565.23 AHX11509.1 - 4.3e-16 58.9 0.0 6.4e-16 58.4 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain AIP3 PF03915.13 AHX11510.1 - 0.14 11.2 9.6 0.19 10.8 9.6 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 Ndc1_Nup PF09531.10 AHX11510.1 - 1.4 7.5 8.4 1.7 7.2 8.4 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF4661 PF15576.6 AHX11510.1 - 1.9 8.4 7.6 2.9 7.7 7.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) Macoilin PF09726.9 AHX11510.1 - 3.7 6.0 12.6 4.2 5.8 12.6 1.1 1 0 0 1 1 1 0 Macoilin family Hid1 PF12722.7 AHX11510.1 - 7.8 4.5 9.8 9.6 4.2 9.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein FBPase_glpX PF03320.13 AHX11511.1 - 9.7e-97 323.5 0.7 1.2e-96 323.3 0.7 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RC-P840_PscD PF10657.9 AHX11511.1 - 0.072 13.2 0.0 0.19 11.9 0.0 1.6 2 0 0 2 2 2 0 Photosystem P840 reaction centre protein PscD Endotoxin_C2 PF18449.1 AHX11511.1 - 0.17 12.2 1.3 5.1 7.5 0.4 2.2 2 0 0 2 2 2 0 Delta endotoxin Topoisom_bac PF01131.20 AHX11512.1 - 5.4e-120 401.2 0.7 7.2e-120 400.8 0.7 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim_C_rpt PF13368.6 AHX11512.1 - 6e-34 115.8 0.7 1.3e-15 57.1 0.0 3.6 3 0 0 3 3 3 3 Topoisomerase C-terminal repeat Toprim PF01751.22 AHX11512.1 - 1.5e-24 86.1 0.1 6.7e-24 84.1 0.0 2.2 2 0 0 2 2 2 1 Toprim domain zf-C4_Topoisom PF01396.19 AHX11512.1 - 9.2e-12 44.5 2.3 6.3e-11 41.9 0.5 2.5 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger Condensin2nSMC PF12422.8 AHX11512.1 - 0.018 15.3 0.0 0.092 12.9 0.0 2.2 2 0 0 2 2 2 0 Condensin II non structural maintenance of chromosomes subunit Fer2_BFD PF04324.15 AHX11512.1 - 0.36 11.2 2.3 0.57 10.6 0.0 2.6 3 0 0 3 3 3 0 BFD-like [2Fe-2S] binding domain Caskin-tail PF16632.5 AHX11512.1 - 0.8 10.2 2.6 30 5.1 0.1 2.7 2 0 0 2 2 2 0 C-terminal region of Caskin Methyltransf_3 PF01596.17 AHX11514.1 - 1.7e-34 118.9 0.0 2.2e-34 118.5 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 AHX11514.1 - 9.8e-14 52.3 0.0 1.3e-13 51.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 AHX11514.1 - 3.2e-11 43.4 0.0 4.5e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 AHX11514.1 - 2.3e-06 27.5 0.0 4e-06 26.7 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 AHX11514.1 - 5.7e-05 22.9 0.0 8e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_25 PF13649.6 AHX11514.1 - 0.00085 20.0 0.0 0.0015 19.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.17 AHX11514.1 - 0.0047 16.1 0.0 0.0065 15.6 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_15 PF09445.10 AHX11514.1 - 0.016 14.7 0.0 0.023 14.3 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase CmcI PF04989.12 AHX11514.1 - 0.023 14.4 0.0 0.034 13.8 0.0 1.2 1 0 0 1 1 1 0 Cephalosporin hydroxylase Methyltr_RsmB-F PF01189.17 AHX11514.1 - 0.047 13.3 0.0 0.077 12.6 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Aconitase PF00330.20 AHX11515.1 - 1.1e-168 562.0 0.0 1.4e-168 561.7 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 AHX11515.1 - 2.2e-43 147.7 0.1 5e-43 146.6 0.0 1.7 2 0 0 2 2 2 1 Aconitase C-terminal domain Acyl_transf_2 PF02273.15 AHX11515.1 - 0.054 12.7 0.0 0.09 12.0 0.0 1.2 1 0 0 1 1 1 0 Acyl transferase Methyltransf_28 PF02636.17 AHX11516.1 - 2e-49 168.6 0.1 1.2e-48 166.0 0.1 1.9 1 1 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase tRNA-synt_1 PF00133.22 AHX11517.1 - 4.3e-105 352.2 0.7 3.3e-103 346.0 0.7 2.7 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 AHX11517.1 - 8.2e-26 90.6 1.1 2.2e-15 56.3 0.0 3.2 3 0 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 AHX11517.1 - 2e-24 86.3 0.3 4.5e-24 85.1 0.3 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.6 AHX11517.1 - 2.1e-09 37.2 0.0 1.9e-08 34.0 0.0 2.1 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 AHX11517.1 - 0.00048 19.6 0.0 0.82 9.0 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 AHX11517.1 - 0.024 13.6 0.0 2.8 6.7 0.0 2.4 2 0 0 2 2 2 0 tRNA synthetases class I (K) PCRF PF03462.18 AHX11518.1 - 6.9e-46 156.6 0.2 6.9e-46 156.6 0.2 1.7 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 AHX11518.1 - 9.6e-40 135.1 1.1 9.6e-40 135.1 1.1 2.1 2 0 0 2 2 2 1 RF-1 domain MIT_C PF16565.5 AHX11518.1 - 0.079 12.9 0.8 3.3 7.7 0.1 2.4 2 0 0 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT Sigma54_AID PF00309.20 AHX11520.1 - 0.089 12.7 5.5 93 3.0 0.0 4.7 4 0 0 4 4 4 0 Sigma-54 factor, Activator interacting domain (AID) Bacillus_HBL PF05791.11 AHX11520.1 - 0.13 12.1 4.1 0.1 12.4 0.5 2.2 2 0 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) HIP1_clath_bdg PF16515.5 AHX11520.1 - 5.7 7.6 16.0 10 6.8 5.7 3.5 3 0 0 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TAN PF11640.8 AHX11520.1 - 7.8 6.6 10.7 0.38 10.9 0.3 3.3 4 1 0 4 4 4 0 Telomere-length maintenance and DNA damage repair DUF2316 PF10078.9 AHX11521.1 - 0.091 13.0 0.1 0.35 11.1 0.1 2.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2316) Baculo_PEP_C PF04513.12 AHX11522.1 - 0.5 10.4 7.4 0.076 13.1 1.5 2.4 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus BATS PF06968.13 AHX11523.1 - 9.2e-17 61.0 0.0 2.3e-16 59.7 0.0 1.7 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 AHX11523.1 - 1.6e-12 48.1 0.0 6e-12 46.3 0.1 1.8 2 0 0 2 2 2 1 Radical SAM superfamily Aminotran_1_2 PF00155.21 AHX11525.1 - 3.1e-49 168.1 0.0 3.8e-49 167.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 AHX11525.1 - 2.9e-09 36.0 0.0 3.8e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 AHX11525.1 - 0.017 14.4 0.0 0.024 13.9 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase OKR_DC_1 PF01276.20 AHX11525.1 - 0.023 13.4 0.1 0.36 9.5 0.1 2.1 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Aminotran_5 PF00266.19 AHX11525.1 - 0.04 12.9 0.0 0.064 12.2 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 AHX11525.1 - 0.053 12.8 0.2 0.14 11.4 0.1 1.8 2 1 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family Abhydrolase_4 PF08386.10 AHX11526.1 - 0.12 12.4 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein Methyltransf_25 PF13649.6 AHX11528.1 - 6.1e-15 55.7 0.0 1.8e-14 54.2 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AHX11528.1 - 2.4e-13 50.6 0.0 5.2e-13 49.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AHX11528.1 - 8e-12 45.8 0.0 2.6e-11 44.1 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AHX11528.1 - 8.3e-12 45.3 0.0 1.3e-11 44.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AHX11528.1 - 6.2e-10 39.1 0.0 1.1e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 AHX11528.1 - 1.6e-07 30.8 0.0 2.4e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain MTS PF05175.14 AHX11528.1 - 6.9e-06 25.7 0.0 1e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 AHX11528.1 - 0.00013 21.7 0.0 0.00018 21.2 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Ubie_methyltran PF01209.18 AHX11528.1 - 0.00019 20.9 0.0 0.00034 20.0 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.6 AHX11528.1 - 0.00079 19.5 0.0 0.0013 18.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Rsm22 PF09243.10 AHX11528.1 - 0.00089 18.6 0.0 0.0013 18.1 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 DREV PF05219.12 AHX11528.1 - 0.0037 16.4 0.0 0.0055 15.8 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase PCMT PF01135.19 AHX11528.1 - 0.0078 16.0 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.7 AHX11528.1 - 0.029 14.3 0.0 0.044 13.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_33 PF10017.9 AHX11528.1 - 0.033 13.4 0.0 0.046 12.9 0.0 1.2 1 0 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent Methyltransf_16 PF10294.9 AHX11528.1 - 0.045 13.5 0.0 0.064 13.0 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase RrnaAD PF00398.20 AHX11528.1 - 0.056 12.5 0.0 0.08 12.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase AdoMet_MTase PF07757.13 AHX11528.1 - 0.12 12.7 0.0 0.22 11.9 0.0 1.4 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase AAA_26 PF13500.6 AHX11529.1 - 1.7e-41 142.2 0.2 1.9e-41 142.1 0.2 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 AHX11529.1 - 0.0085 16.1 0.0 0.014 15.4 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Aminotran_3 PF00202.21 AHX11530.1 - 5.9e-107 357.8 0.0 6.8e-107 357.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 AHX11530.1 - 0.016 14.4 0.0 0.055 12.6 0.0 1.9 1 1 0 1 1 1 0 Aminotransferase class I and II RNase_3_N PF18497.1 AHX11530.1 - 0.2 11.9 1.1 0.95 9.7 0.1 2.5 2 1 0 2 2 2 0 Ribonuclease III N-terminal domain COX2 PF00116.20 AHX11532.1 - 3.6e-53 178.6 0.1 7.9e-53 177.5 0.0 1.6 2 0 0 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain COX2_TM PF02790.15 AHX11532.1 - 2.3e-26 91.7 0.8 4.2e-26 90.9 0.8 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, transmembrane domain Dpy19 PF10034.9 AHX11532.1 - 0.0048 15.2 0.2 0.006 14.9 0.2 1.0 1 0 0 1 1 1 1 Q-cell neuroblast polarisation Sulf_transp PF04143.14 AHX11532.1 - 0.038 13.5 0.1 0.047 13.2 0.1 1.1 1 0 0 1 1 1 0 Sulphur transport DUF2070 PF09843.9 AHX11532.1 - 0.043 12.1 0.5 0.056 11.7 0.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) COX1 PF00115.20 AHX11533.1 - 5.4e-148 493.4 66.6 6.4e-148 493.2 66.6 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I UbiA PF01040.18 AHX11534.1 - 3.5e-55 187.1 31.2 3.5e-55 187.1 31.2 1.4 1 1 0 1 1 1 1 UbiA prenyltransferase family Rieske PF00355.26 AHX11535.1 - 1.4e-13 50.6 0.1 2.3e-13 49.9 0.1 1.4 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain UCR_Fe-S_N PF10399.9 AHX11535.1 - 3.2e-08 32.8 0.1 9.2e-08 31.3 0.0 1.8 2 0 0 2 2 2 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Cytochrome_B PF00033.19 AHX11536.1 - 2.5e-75 252.5 17.4 5.2e-75 251.4 17.4 1.5 1 0 0 1 1 1 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 AHX11536.1 - 3.4e-43 147.6 10.7 3.4e-43 147.6 10.7 2.3 2 0 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB Cytochrom_B_C PF00032.17 AHX11536.1 - 9.7e-40 135.0 2.6 9.7e-40 135.0 2.6 3.7 3 1 0 3 3 3 1 Cytochrome b(C-terminal)/b6/petD TRAM1 PF08390.11 AHX11536.1 - 8.2 6.2 9.1 25 4.6 0.0 3.7 3 1 0 3 3 3 0 TRAM1-like protein Cytochrom_C1 PF02167.15 AHX11537.1 - 2.4e-92 308.6 0.0 2.8e-92 308.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome C1 family Cytochrome_CBB3 PF13442.6 AHX11537.1 - 0.0025 18.1 0.0 0.0053 17.1 0.0 1.6 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 AHX11537.1 - 0.065 14.4 0.2 0.14 13.3 0.2 1.8 1 1 0 1 1 1 0 Cytochrome c Cytochrom_C550 PF14495.6 AHX11537.1 - 0.14 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c-550 domain SecD_SecF PF02355.16 AHX11538.1 - 3.7e-17 62.3 14.8 7.1e-17 61.4 14.8 1.4 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 AHX11538.1 - 0.00015 21.1 0.0 0.00034 20.0 0.0 1.6 1 0 0 1 1 1 1 SecD/SecF GG Motif MMPL PF03176.15 AHX11538.1 - 0.0009 18.3 19.4 0.0015 17.5 19.4 1.3 1 0 0 1 1 1 1 MMPL family ACR_tran PF00873.19 AHX11538.1 - 0.0023 15.7 17.9 0.0042 14.8 17.9 1.3 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Thioesterase PF00975.20 AHX11539.1 - 0.0031 17.6 0.0 0.0053 16.9 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain PGAP1 PF07819.13 AHX11539.1 - 0.025 14.3 0.0 0.056 13.1 0.0 1.6 1 1 0 1 1 1 0 PGAP1-like protein Abhydrolase_3 PF07859.13 AHX11539.1 - 0.048 13.5 0.0 0.071 13.0 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Lipase_3 PF01764.25 AHX11539.1 - 0.073 12.9 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_1 PF00561.20 AHX11539.1 - 0.08 12.6 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Methyltransf_11 PF08241.12 AHX11540.1 - 5.6e-20 71.8 0.0 8.5e-20 71.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AHX11540.1 - 1.3e-18 67.4 0.0 1.7e-18 67.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AHX11540.1 - 9e-16 58.4 0.0 1.6e-15 57.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AHX11540.1 - 7.2e-13 49.1 0.0 1.2e-12 48.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AHX11540.1 - 4.2e-12 46.1 0.0 5.7e-12 45.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 AHX11540.1 - 1.7e-08 34.3 0.0 2.1e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.13 AHX11540.1 - 1.9e-08 34.0 0.2 2.5e-08 33.7 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 AHX11540.1 - 1.3e-05 24.8 0.0 2.1e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_9 PF08003.11 AHX11540.1 - 1.5e-05 24.1 0.0 2.2e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Ubie_methyltran PF01209.18 AHX11540.1 - 1.7e-05 24.3 0.0 3e-05 23.5 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family CMAS PF02353.20 AHX11540.1 - 0.00016 21.1 0.0 0.00024 20.5 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 AHX11540.1 - 0.00018 21.2 0.0 0.00025 20.7 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW DREV PF05219.12 AHX11540.1 - 0.00035 19.7 0.0 0.0004 19.6 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase TehB PF03848.14 AHX11540.1 - 0.00055 19.4 0.1 0.00078 18.9 0.1 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_PK PF05891.12 AHX11540.1 - 0.001 18.6 0.0 0.0015 18.1 0.0 1.2 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Methyltransf_32 PF13679.6 AHX11540.1 - 0.012 15.6 0.0 0.017 15.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain TPMT PF05724.11 AHX11540.1 - 0.055 13.1 0.0 0.095 12.3 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) ACP_syn_III_C PF08541.10 AHX11541.1 - 1.1e-31 108.8 1.6 2.8e-31 107.5 0.0 2.5 3 1 1 4 4 4 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 AHX11541.1 - 6.7e-28 96.4 3.2 1.5e-27 95.2 3.2 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_N PF00108.23 AHX11541.1 - 1.1e-06 28.2 0.3 1.9e-06 27.4 0.3 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain Chal_sti_synt_C PF02797.15 AHX11541.1 - 0.0012 18.9 0.1 0.003 17.6 0.1 1.6 2 0 0 2 2 2 1 Chalcone and stilbene synthases, C-terminal domain Chal_sti_synt_N PF00195.19 AHX11541.1 - 0.0017 17.8 1.1 0.0034 16.9 1.1 1.5 1 1 0 1 1 1 1 Chalcone and stilbene synthases, N-terminal domain Diphthami_syn_2 PF01902.17 AHX11541.1 - 0.045 13.3 0.1 0.078 12.5 0.1 1.4 1 0 0 1 1 1 0 Diphthamide synthase FA_synthesis PF02504.15 AHX11542.1 - 5.5e-91 305.0 0.8 6.3e-91 304.8 0.8 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein 2Fe-2S_thioredx PF01257.19 AHX11544.1 - 1.3e-59 200.2 0.0 1.5e-59 200.0 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin ABC1 PF03109.16 AHX11545.1 - 2e-28 99.0 0.1 3.6e-28 98.1 0.1 1.4 1 0 0 1 1 1 1 ABC1 family APH PF01636.23 AHX11545.1 - 3.7e-05 23.8 0.0 5.2e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 AHX11545.1 - 0.00016 21.1 0.1 0.00032 20.1 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain Rhabdo_NV PF02484.15 AHX11546.1 - 0.1 12.8 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 Rhabdovirus Non-virion protein Bac_DNA_binding PF00216.21 AHX11547.1 - 2e-18 66.4 0.8 2.4e-18 66.1 0.8 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-CCDC81_euk_1 PF14908.6 AHX11547.1 - 1.7e-07 31.3 0.0 2.2e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 HU-HIG PF18291.1 AHX11547.1 - 2.2e-06 27.8 0.2 2.6e-06 27.6 0.2 1.0 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 AHX11547.1 - 0.00011 22.0 0.0 0.00016 21.5 0.0 1.3 1 1 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 AHX11547.1 - 0.00011 22.3 0.0 0.00016 21.7 0.0 1.4 1 1 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 DUF2987 PF11205.8 AHX11547.1 - 0.023 14.6 0.4 0.029 14.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2987) NA37 PF04245.13 AHX11547.1 - 0.044 13.3 0.1 0.044 13.3 0.1 1.1 1 0 0 1 1 1 0 37-kD nucleoid-associated bacterial protein Transcrip_reg PF01709.20 AHX11548.1 - 1.3e-73 247.4 0.2 1.5e-73 247.2 0.2 1.0 1 0 0 1 1 1 1 Transcriptional regulator Rotamase PF00639.21 AHX11548.1 - 0.066 14.2 0.1 0.25 12.3 0.1 2.0 2 0 0 2 2 2 0 PPIC-type PPIASE domain YcgL PF05166.13 AHX11548.1 - 0.093 13.1 0.1 0.25 11.7 0.0 1.8 2 0 0 2 2 2 0 YcgL domain Cpn60_TCP1 PF00118.24 AHX11549.1 - 1.5e-89 300.9 19.1 2.2e-89 300.3 19.1 1.3 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family TraH PF06122.11 AHX11549.1 - 0.0047 16.3 3.2 0.0063 15.8 0.9 1.9 2 0 0 2 2 2 1 Conjugative relaxosome accessory transposon protein Cpn10 PF00166.21 AHX11550.1 - 2.2e-30 104.5 1.0 2.4e-30 104.4 1.0 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit RNase_P_Rpp14 PF01900.19 AHX11551.1 - 0.022 15.0 0.0 0.038 14.2 0.0 1.4 1 0 0 1 1 1 0 Rpp14/Pop5 family SurA_N_3 PF13624.6 AHX11552.1 - 2.1e-25 89.4 1.3 2.1e-25 89.4 1.3 3.0 4 0 0 4 4 4 1 SurA N-terminal domain SurA_N_2 PF13623.6 AHX11552.1 - 5.6e-16 58.7 3.0 1e-15 57.9 0.2 2.6 3 0 0 3 3 3 1 SurA N-terminal domain Rotamase_2 PF13145.6 AHX11552.1 - 6.6e-11 43.1 10.6 0.012 16.4 0.5 4.4 2 1 1 3 3 3 3 PPIC-type PPIASE domain SurA_N PF09312.11 AHX11552.1 - 0.019 15.1 1.1 0.058 13.5 0.5 2.2 2 0 0 2 2 2 0 SurA N-terminal domain HTH_17 PF12728.7 AHX11552.1 - 0.047 13.9 0.1 0.89 9.8 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain PolyA_pol PF01743.20 AHX11553.1 - 6.4e-31 107.4 0.0 1.1e-30 106.6 0.0 1.4 1 0 0 1 1 1 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 AHX11553.1 - 2.7e-08 33.4 0.4 1e-07 31.6 0.4 2.0 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A CdvA PF18822.1 AHX11553.1 - 0.047 13.5 0.3 0.14 12.0 0.3 1.8 1 0 0 1 1 1 0 CdvA-like coiled-coil domain DUF4413 PF14372.6 AHX11554.1 - 0.16 12.4 0.1 0.33 11.3 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4413) DUF4268 PF14088.6 AHX11554.1 - 0.23 11.3 1.4 8.1 6.3 0.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4268) Myc_N PF01056.18 AHX11554.1 - 0.98 9.3 5.8 1.6 8.6 5.6 1.4 1 1 0 1 1 1 0 Myc amino-terminal region DHBP_synthase PF00926.19 AHX11555.1 - 3.3e-55 186.6 0.0 3.7e-55 186.4 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase FtsK_SpoIIIE PF01580.18 AHX11556.1 - 2e-65 220.6 0.7 4.2e-65 219.5 0.7 1.6 1 1 0 1 1 1 1 FtsK/SpoIIIE family FtsK_alpha PF17854.1 AHX11556.1 - 2.8e-26 91.6 0.0 6.6e-26 90.4 0.0 1.7 1 0 0 1 1 1 1 FtsK alpha domain FtsK_gamma PF09397.10 AHX11556.1 - 4.5e-25 87.2 0.1 1.2e-24 85.9 0.1 1.8 1 0 0 1 1 1 1 Ftsk gamma domain FtsK_4TM PF13491.6 AHX11556.1 - 2.4e-05 24.1 7.5 3.7e-05 23.5 3.5 2.2 2 0 0 2 2 2 1 4TM region of DNA translocase FtsK/SpoIIIE AAA_10 PF12846.7 AHX11556.1 - 2.5e-05 23.4 0.0 0.0099 14.8 0.0 2.3 2 0 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 AHX11556.1 - 7.3e-05 23.1 0.0 0.00034 20.9 0.0 2.1 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 AHX11556.1 - 0.00042 19.8 1.3 4.9 6.5 0.2 3.5 3 0 0 3 3 3 2 Bacterial TniB protein T2SSE PF00437.20 AHX11556.1 - 0.00063 18.9 0.0 0.0012 18.0 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein DEAD PF00270.29 AHX11556.1 - 0.00095 19.0 0.6 0.0047 16.7 0.6 2.1 1 1 0 1 1 1 1 DEAD/DEAH box helicase DUF87 PF01935.17 AHX11556.1 - 0.0012 19.0 2.5 0.0027 17.8 0.1 2.7 4 0 0 4 4 4 1 Helicase HerA, central domain TrwB_AAD_bind PF10412.9 AHX11556.1 - 0.026 13.5 0.0 0.093 11.6 0.0 1.8 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_29 PF13555.6 AHX11556.1 - 0.039 13.7 0.1 0.13 12.0 0.1 1.9 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF4064 PF13273.6 AHX11556.1 - 4.8 7.5 13.6 0.31 11.3 7.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) ABC2_membrane_3 PF12698.7 AHX11556.1 - 9.3 5.3 14.6 1.2 8.2 10.0 1.7 2 0 0 2 2 2 0 ABC-2 family transporter protein Acetyltransf_1 PF00583.25 AHX11558.1 - 3.3e-08 33.8 0.1 5.4e-08 33.1 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AHX11558.1 - 8e-08 32.6 0.4 1.4e-07 31.8 0.4 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AHX11558.1 - 2.8e-06 27.3 0.0 5.3e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 AHX11558.1 - 0.0022 18.2 0.0 0.0036 17.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Amidase02_C PF12123.8 AHX11558.1 - 0.032 13.9 0.1 0.19 11.4 0.0 2.3 2 0 0 2 2 2 0 N-acetylmuramoyl-l-alanine amidase Acetyltransf_3 PF13302.7 AHX11558.1 - 0.037 14.7 0.0 0.073 13.7 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 AHX11558.1 - 0.047 13.7 0.0 0.087 12.8 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_4 PF13420.7 AHX11558.1 - 0.094 12.8 0.1 0.61 10.2 0.0 2.2 2 1 0 2 2 2 0 Acetyltransferase (GNAT) domain PriA_3primeBD PF17764.1 AHX11558.1 - 0.11 12.5 0.0 2.1 8.3 0.0 2.3 2 0 0 2 2 2 0 3′ DNA-binding domain (3′BD) Pyr_redox_2 PF07992.14 AHX11560.1 - 1.5e-12 47.4 0.0 1.4e-11 44.2 0.0 2.4 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_20 PF14691.6 AHX11560.1 - 1.1e-05 25.1 1.8 4.5e-05 23.2 0.3 2.8 3 0 0 3 3 3 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox PF00070.27 AHX11560.1 - 0.0015 19.0 0.4 5.2 7.7 0.0 4.4 5 0 0 5 5 5 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AHX11560.1 - 0.061 12.4 0.7 4.9 6.1 0.0 2.7 3 0 0 3 3 3 0 FAD binding domain K_oxygenase PF13434.6 AHX11560.1 - 0.08 12.1 0.0 2.5 7.2 0.0 2.6 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 AHX11560.1 - 0.083 12.1 0.0 0.35 10.1 0.0 2.0 2 0 0 2 2 2 0 FAD binding domain Pyr_redox_3 PF13738.6 AHX11560.1 - 0.15 11.3 0.2 26 3.9 0.0 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AHX11560.1 - 0.18 10.9 0.0 1.1 8.2 0.0 2.2 2 0 0 2 2 2 0 Glucose inhibited division protein A FabA PF07977.13 AHX11561.1 - 4.2e-30 104.2 0.0 4.8e-30 104.0 0.0 1.0 1 0 0 1 1 1 1 FabA-like domain 4HBT PF03061.22 AHX11561.1 - 0.0082 16.5 0.0 0.013 15.9 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily MaoC_dehydratas PF01575.19 AHX11561.1 - 0.084 12.4 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 MaoC like domain OmpH PF03938.14 AHX11562.1 - 4.5e-19 69.2 7.7 5.9e-19 68.8 7.7 1.2 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) SurA_N_3 PF13624.6 AHX11562.1 - 0.039 13.7 1.3 0.071 12.9 0.1 2.0 2 1 0 2 2 2 0 SurA N-terminal domain Atg14 PF10186.9 AHX11562.1 - 0.93 8.5 6.5 1.1 8.3 6.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2203 PF09969.9 AHX11562.1 - 1.4 9.6 4.9 0.5 11.1 2.3 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) M PF02370.16 AHX11562.1 - 1.8 9.4 7.3 0.28 11.8 1.2 3.0 3 0 0 3 3 3 0 M protein repeat Glycos_transf_4 PF00953.21 AHX11563.1 - 1.4e-35 122.7 17.9 1.4e-35 122.7 17.9 2.2 2 1 0 2 2 2 1 Glycosyl transferase family 4 MraY_sig1 PF10555.9 AHX11563.1 - 0.031 13.8 0.0 0.11 12.1 0.0 2.1 1 0 0 1 1 1 0 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 adh_short_C2 PF13561.6 AHX11564.1 - 8.7e-63 212.0 0.2 9.8e-63 211.8 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AHX11564.1 - 8.7e-54 181.9 0.5 1e-53 181.7 0.5 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AHX11564.1 - 2.2e-18 66.8 0.3 3e-18 66.4 0.3 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AHX11564.1 - 7.5e-05 22.3 0.4 0.00029 20.4 0.4 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 AHX11564.1 - 0.00047 19.4 0.1 0.00072 18.8 0.1 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Shikimate_DH PF01488.20 AHX11564.1 - 0.00097 19.2 0.1 0.0017 18.4 0.1 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GDP_Man_Dehyd PF16363.5 AHX11564.1 - 0.0012 18.3 0.0 0.0022 17.5 0.0 1.4 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 AHX11564.1 - 0.0048 16.8 0.0 0.0058 16.5 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding ThiF PF00899.21 AHX11564.1 - 0.026 13.9 0.1 0.048 13.0 0.1 1.4 1 0 0 1 1 1 0 ThiF family F420_oxidored PF03807.17 AHX11564.1 - 0.052 14.1 0.1 0.74 10.4 0.1 2.1 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent NmrA PF05368.13 AHX11564.1 - 0.17 11.4 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family DUF4253 PF14062.6 AHX11564.1 - 0.2 11.8 0.0 0.57 10.4 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4253) RNase_H PF00075.24 AHX11566.1 - 4.2e-45 153.4 0.0 4.7e-45 153.3 0.0 1.0 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.6 AHX11566.1 - 0.00071 19.4 0.0 0.001 18.9 0.0 1.3 1 0 0 1 1 1 1 Reverse transcriptase-like Methyltransf_23 PF13489.6 AHX11567.1 - 2e-12 47.3 0.0 3e-12 46.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AHX11567.1 - 2.4e-10 40.9 0.1 4.9e-10 39.9 0.1 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AHX11567.1 - 1e-06 29.3 0.0 2.9e-06 27.9 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AHX11567.1 - 1e-05 25.4 0.0 4.2e-05 23.4 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AHX11567.1 - 1.8e-05 25.4 0.1 4.9e-05 24.0 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase domain GreA_GreB_N PF03449.15 AHX11568.1 - 6.6e-29 99.9 1.0 1e-28 99.2 1.0 1.3 1 0 0 1 1 1 1 Transcription elongation factor, N-terminal GreA_GreB PF01272.19 AHX11568.1 - 1.3e-28 98.7 0.9 2.7e-28 97.7 0.9 1.5 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term Phage_cap_P2 PF05125.12 AHX11568.1 - 0.057 12.4 0.3 0.068 12.1 0.3 1.1 1 0 0 1 1 1 0 Phage major capsid protein, P2 family Ten1_2 PF15490.6 AHX11568.1 - 0.078 12.7 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Telomere-capping, CST complex subunit Pyr_redox_2 PF07992.14 AHX11569.1 - 6.9e-67 225.7 0.1 1.1e-66 225.1 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 AHX11569.1 - 9e-38 128.9 0.4 6.4e-37 126.2 0.3 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 AHX11569.1 - 2.7e-22 79.1 3.2 8.3e-18 64.7 0.0 3.1 3 0 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AHX11569.1 - 4.1e-14 52.5 2.4 1.8e-09 37.3 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AHX11569.1 - 1.2e-13 50.6 9.6 2.3e-06 26.6 0.4 4.3 3 1 1 4 4 4 3 HI0933-like protein FAD_oxidored PF12831.7 AHX11569.1 - 1.3e-11 44.6 0.3 4.1e-09 36.3 0.1 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AHX11569.1 - 6.4e-11 42.0 8.1 1.5e-07 30.8 1.0 3.8 2 1 2 4 4 4 3 FAD binding domain GIDA PF01134.22 AHX11569.1 - 7.8e-11 41.7 7.8 3.6e-07 29.6 3.4 2.9 2 1 0 2 2 2 2 Glucose inhibited division protein A NAD_binding_8 PF13450.6 AHX11569.1 - 1.9e-08 34.4 7.3 8.7e-06 25.9 0.3 3.3 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AHX11569.1 - 5.4e-08 32.8 4.2 0.00071 19.3 0.2 3.9 2 2 2 4 4 4 2 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 AHX11569.1 - 9.3e-07 28.4 2.2 0.21 10.9 0.1 3.3 3 0 0 3 3 3 3 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 AHX11569.1 - 1.2e-06 28.0 6.0 0.0023 17.2 0.5 3.9 3 1 1 4 4 4 2 FAD binding domain Thi4 PF01946.17 AHX11569.1 - 2.8e-05 23.5 6.9 0.00036 19.9 0.4 2.9 2 1 1 3 3 3 2 Thi4 family Lycopene_cycl PF05834.12 AHX11569.1 - 3.4e-05 23.1 2.2 0.12 11.4 0.8 2.6 3 0 0 3 3 3 2 Lycopene cyclase protein XdhC_C PF13478.6 AHX11569.1 - 0.0067 16.9 0.2 5 7.6 0.0 3.2 3 1 0 3 3 3 1 XdhC Rossmann domain 3HCDH_N PF02737.18 AHX11569.1 - 0.0068 16.3 2.6 0.022 14.6 0.1 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF1609 PF07753.11 AHX11569.1 - 0.025 14.1 0.0 0.18 11.3 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1609) K_oxygenase PF13434.6 AHX11569.1 - 0.027 13.6 0.2 4.3 6.4 0.0 2.7 2 1 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.6 AHX11569.1 - 0.037 14.5 0.3 6.5 7.3 0.0 3.0 3 0 0 3 3 3 0 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 AHX11569.1 - 0.051 13.1 1.8 5.5 6.5 0.0 2.5 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 AHX11569.1 - 0.074 12.4 0.2 0.74 9.2 0.0 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Trp_halogenase PF04820.14 AHX11569.1 - 0.19 10.5 1.5 0.57 9.0 0.1 2.0 2 0 0 2 2 2 0 Tryptophan halogenase Peptidase_M20 PF01546.28 AHX11570.1 - 6.4e-31 107.7 0.0 7.8e-31 107.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AHX11570.1 - 8.2e-19 67.5 0.0 1.4e-18 66.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain GTP_EFTU PF00009.27 AHX11572.1 - 2.2e-52 177.5 0.0 3.4e-52 176.8 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 AHX11572.1 - 1.2e-22 79.7 0.0 2.2e-22 78.9 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G C-terminus MMR_HSR1 PF01926.23 AHX11572.1 - 7.3e-08 32.5 0.1 1.3e-07 31.6 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 AHX11572.1 - 6.9e-05 23.2 0.3 0.00022 21.5 0.3 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 Septin PF00735.18 AHX11572.1 - 0.0065 15.8 0.1 0.011 15.1 0.1 1.2 1 0 0 1 1 1 1 Septin SRPRB PF09439.10 AHX11572.1 - 0.011 15.1 0.0 0.022 14.2 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Dynamin_N PF00350.23 AHX11572.1 - 0.012 15.6 0.0 0.62 10.1 0.0 2.4 1 1 1 2 2 2 0 Dynamin family EFG_II PF14492.6 AHX11572.1 - 0.098 12.8 0.2 0.38 10.9 0.2 2.0 2 1 0 2 2 2 0 Elongation Factor G, domain II DUF4938 PF16292.5 AHX11572.1 - 0.13 11.5 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4938) DNA_pol_A PF00476.20 AHX11573.1 - 4.5e-122 407.7 5.0 6.5e-122 407.2 5.0 1.2 1 0 0 1 1 1 1 DNA polymerase family A 5_3_exonuc_N PF02739.16 AHX11573.1 - 1.2e-45 155.3 0.0 2.4e-45 154.3 0.0 1.6 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain 5_3_exonuc PF01367.20 AHX11573.1 - 2.6e-26 92.1 0.1 2.4e-25 88.9 0.0 2.7 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_2 PF12826.7 AHX11573.1 - 0.019 15.1 0.0 0.096 12.8 0.0 2.2 2 0 0 2 2 2 0 Helix-hairpin-helix motif HHH_5 PF14520.6 AHX11573.1 - 0.019 15.6 0.0 0.056 14.1 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix domain IMS_HHH PF11798.8 AHX11573.1 - 0.03 14.6 0.4 1.5 9.3 0.0 2.9 2 0 0 2 2 2 0 IMS family HHH motif COX3 PF00510.18 AHX11574.1 - 1.1e-83 281.0 20.2 1.5e-83 280.6 20.2 1.2 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III CopD PF05425.13 AHX11574.1 - 0.15 12.4 3.3 0.24 11.8 0.5 2.3 2 0 0 2 2 2 0 Copper resistance protein D RNA_pol_Rpb1_1 PF04997.12 AHX11575.1 - 1.2e-84 284.3 0.0 2.1e-84 283.6 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_5 PF04998.17 AHX11575.1 - 1.7e-66 224.4 0.4 3.6e-66 223.3 0.2 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 AHX11575.1 - 1.1e-36 126.5 0.0 2.3e-33 115.8 0.0 2.8 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 AHX11575.1 - 3e-21 76.0 0.0 8.6e-21 74.5 0.0 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 AHX11575.1 - 3.2e-16 59.2 0.4 8.4e-16 57.9 0.4 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 Peptidase_M23 PF01551.22 AHX11575.1 - 1.6e-05 25.0 0.2 0.53 10.5 0.0 4.8 4 1 1 5 5 5 2 Peptidase family M23 Apocytochr_F_C PF01333.19 AHX11575.1 - 0.0017 18.3 0.0 0.029 14.4 0.0 2.8 3 0 0 3 3 3 1 Apocytochrome F, C-terminal Biotin_lipoyl_2 PF13533.6 AHX11575.1 - 0.01 15.7 0.0 1.1 9.1 0.0 3.4 3 0 0 3 3 3 0 Biotin-lipoyl like YnfE PF17452.2 AHX11575.1 - 0.036 14.3 0.3 0.12 12.7 0.3 1.8 1 0 0 1 1 1 0 Uncharacterized YnfE-like RPN1_C PF18051.1 AHX11575.1 - 0.093 12.8 0.0 0.25 11.4 0.0 1.7 1 0 0 1 1 1 0 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal RNA_pol_Rpb2_6 PF00562.28 AHX11576.1 - 4.6e-150 500.0 0.0 1.2e-149 498.7 0.0 1.6 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_3 PF04565.16 AHX11576.1 - 2.2e-29 101.4 0.0 4.2e-29 100.5 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_2 PF04561.14 AHX11576.1 - 5.3e-29 101.2 1.3 5.9e-18 65.2 0.1 2.8 3 0 0 3 3 3 2 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_1 PF04563.15 AHX11576.1 - 1.7e-25 89.7 0.0 4.3e-25 88.4 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_7 PF04560.20 AHX11576.1 - 1.9e-22 79.4 0.0 5.2e-22 78.0 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_45 PF10385.9 AHX11576.1 - 1.7e-17 63.5 0.7 1.2e-16 60.7 1.1 2.2 2 0 0 2 2 2 1 RNA polymerase beta subunit external 1 domain Biotin_lipoyl_2 PF13533.6 AHX11576.1 - 0.018 14.9 0.2 0.09 12.6 0.1 2.2 2 0 0 2 2 2 0 Biotin-lipoyl like Ribosomal_L12 PF00542.19 AHX11577.1 - 8.7e-17 61.2 3.5 8.7e-17 61.2 3.5 2.5 2 1 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 AHX11577.1 - 5.6e-06 26.0 4.5 5.6e-06 26.0 4.5 1.9 3 0 0 3 3 3 1 Ribosomal protein L7/L12 dimerisation domain Ribosomal_L10 PF00466.20 AHX11578.1 - 3.9e-12 46.2 0.0 5.3e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_L1 PF00687.21 AHX11579.1 - 6.2e-25 88.1 0.0 7.7e-25 87.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L11_N PF03946.14 AHX11580.1 - 3.2e-20 71.7 0.0 6.1e-20 70.8 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 AHX11580.1 - 2.9e-12 46.9 0.1 5.2e-12 46.1 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain NusG PF02357.19 AHX11581.1 - 1.1e-06 29.0 0.0 1.6e-06 28.5 0.0 1.3 1 0 0 1 1 1 1 Transcription termination factor nusG SecE PF00584.20 AHX11582.1 - 9.3e-07 28.7 4.0 9.6e-07 28.6 4.0 1.0 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex DUF1751 PF08551.10 AHX11582.1 - 0.02 15.4 2.3 0.02 15.4 2.3 1.0 1 0 0 1 1 1 0 Eukaryotic integral membrane protein (DUF1751) DC_STAMP PF07782.13 AHX11582.1 - 0.11 12.3 2.2 0.099 12.5 2.2 1.0 1 0 0 1 1 1 0 DC-STAMP-like protein GTP_EFTU PF00009.27 AHX11583.1 - 3e-51 173.7 0.0 4.3e-51 173.2 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 AHX11583.1 - 7.6e-26 90.6 0.0 1.9e-25 89.3 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 AHX11583.1 - 8.1e-18 64.6 7.9 1.6e-16 60.4 4.7 2.6 2 0 0 2 2 2 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 AHX11583.1 - 0.00029 20.9 0.0 0.00059 19.9 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 AHX11584.1 - 3.8e-68 228.9 0.0 5.8e-68 228.3 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 AHX11584.1 - 5.6e-40 135.9 0.0 1.2e-39 134.8 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 AHX11584.1 - 4.6e-30 103.5 0.0 9.1e-30 102.6 0.0 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 AHX11584.1 - 1.6e-29 101.8 0.1 3.4e-29 100.7 0.1 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 AHX11584.1 - 9.3e-16 58.0 0.4 6.8e-15 55.2 0.1 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 RF3_C PF16658.5 AHX11584.1 - 0.00028 20.7 0.0 0.00061 19.6 0.0 1.5 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain MMR_HSR1 PF01926.23 AHX11584.1 - 0.0014 18.7 0.0 0.0027 17.8 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase AIG1 PF04548.16 AHX11584.1 - 0.0095 15.3 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 1 AIG1 family Ribosomal_S7 PF00177.21 AHX11585.1 - 7.1e-48 162.0 1.2 8.3e-48 161.8 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ribosom_S12_S23 PF00164.25 AHX11586.1 - 2e-39 133.8 1.3 2.3e-39 133.5 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Helicase_C PF00271.31 AHX11587.1 - 3.3e-20 72.5 0.7 5.9e-16 58.8 0.2 2.8 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD PF00270.29 AHX11587.1 - 3.8e-20 72.4 3.4 1.9e-19 70.1 0.6 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 AHX11587.1 - 5.7e-10 39.5 0.0 1.2e-09 38.4 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit RecG_wedge PF17191.4 AHX11587.1 - 0.00012 21.8 0.1 0.00032 20.4 0.1 1.8 1 0 0 1 1 1 1 RecG wedge domain AAA_30 PF13604.6 AHX11587.1 - 0.00053 19.8 0.3 0.0013 18.5 0.1 1.7 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AHX11587.1 - 0.0018 18.6 1.3 0.16 12.3 0.2 3.0 2 2 1 3 3 3 1 AAA domain tRNA_anti-codon PF01336.25 AHX11587.1 - 0.012 15.6 0.0 0.047 13.7 0.0 2.1 1 1 0 1 1 1 0 OB-fold nucleic acid binding domain Flavi_DEAD PF07652.14 AHX11587.1 - 0.014 15.4 0.0 0.054 13.5 0.0 2.0 1 1 0 1 1 1 0 Flavivirus DEAD domain TsaE PF02367.17 AHX11587.1 - 0.036 14.1 0.2 0.13 12.2 0.1 2.0 1 1 1 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NADHdh-2_N PF12155.8 AHX11587.1 - 0.037 14.4 0.5 0.12 12.7 0.3 2.0 1 1 1 2 2 2 0 NADH dehydrogenase subunit 2 N-terminal Proton_antipo_M PF00361.20 AHX11589.1 - 1.4e-79 267.4 27.9 1.4e-79 267.4 27.9 1.7 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_M PF00361.20 AHX11590.1 - 1.1e-53 182.4 32.4 1.1e-53 182.4 32.4 2.8 2 1 0 2 2 2 1 Proton-conducting membrane transporter NADHdeh_related PF10125.9 AHX11590.1 - 0.0034 16.8 7.8 0.0034 16.8 7.8 2.8 1 1 2 3 3 3 1 NADH dehydrogenase I, subunit N related protein BPL_LplA_LipB PF03099.19 AHX11591.1 - 4.6e-06 26.6 0.2 8.1e-06 25.8 0.2 1.5 1 1 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.17 AHX11591.1 - 4.9e-06 26.3 0.0 1.1e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain polyprenyl_synt PF00348.17 AHX11592.1 - 2e-37 128.7 0.0 2.4e-37 128.4 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Gln-synt_C PF00120.24 AHX11593.1 - 3.4e-25 88.8 0.0 5.7e-25 88.0 0.0 1.3 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain MlaE PF02405.16 AHX11594.1 - 7.5e-66 221.8 25.0 8.6e-66 221.6 25.0 1.0 1 0 0 1 1 1 1 Permease MlaE Fst_toxin PF13955.6 AHX11594.1 - 0.067 13.1 1.8 0.25 11.3 1.8 2.0 1 0 0 1 1 1 0 Toxin Fst, type I toxin-antitoxin system Trp_oprn_chp PF09534.10 AHX11594.1 - 0.41 10.4 3.8 0.096 12.5 0.7 1.4 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) BIV_Env PF05858.12 AHX11594.1 - 0.47 8.6 3.2 0.56 8.3 3.2 1.1 1 0 0 1 1 1 0 Bovine immunodeficiency virus surface protein (SU) ABC_tran PF00005.27 AHX11595.1 - 2.5e-29 102.5 0.0 3.8e-29 101.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AHX11595.1 - 2e-06 27.9 0.4 0.00034 20.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Mg_chelatase PF01078.21 AHX11595.1 - 0.0019 17.7 0.0 0.0066 15.8 0.0 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 AHX11595.1 - 0.0045 16.9 0.0 0.007 16.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 AHX11595.1 - 0.0073 15.8 0.0 0.016 14.6 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain FtsK_SpoIIIE PF01580.18 AHX11595.1 - 0.0077 15.6 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_29 PF13555.6 AHX11595.1 - 0.011 15.4 0.0 0.022 14.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 AHX11595.1 - 0.043 13.7 0.1 0.07 13.0 0.1 1.3 1 0 0 1 1 1 0 NACHT domain ChitinaseA_N PF08329.10 AHX11595.1 - 0.064 12.9 0.2 0.25 11.0 0.1 1.8 2 0 0 2 2 2 0 Chitinase A, N-terminal domain MCM PF00493.23 AHX11595.1 - 0.068 12.3 0.3 0.7 8.9 0.0 2.1 2 0 0 2 2 2 0 MCM P-loop domain AAA_10 PF12846.7 AHX11595.1 - 0.089 11.7 0.0 0.14 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_23 PF13476.6 AHX11595.1 - 0.12 12.9 0.1 0.19 12.2 0.1 1.4 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 AHX11595.1 - 0.12 12.0 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain ABC_tran PF00005.27 AHX11596.1 - 6.6e-29 101.2 0.0 8.4e-29 100.8 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AHX11596.1 - 4.1e-07 30.1 6.1 0.00049 20.0 0.6 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system NACHT PF05729.12 AHX11596.1 - 0.0011 18.9 0.1 0.0021 18.0 0.1 1.4 1 0 0 1 1 1 1 NACHT domain AAA_23 PF13476.6 AHX11596.1 - 0.003 18.1 1.7 0.0046 17.5 1.6 1.4 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 AHX11596.1 - 0.0035 16.8 0.4 2 7.8 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AHX11596.1 - 0.004 16.9 0.1 0.0086 15.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain PIF1 PF05970.14 AHX11596.1 - 0.0078 15.4 0.1 0.011 14.9 0.1 1.2 1 0 0 1 1 1 1 PIF1-like helicase AAA_16 PF13191.6 AHX11596.1 - 0.013 15.9 0.0 0.016 15.6 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 AHX11596.1 - 0.042 13.6 0.0 0.11 12.3 0.0 1.5 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 AHX11596.1 - 0.062 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_13 PF13166.6 AHX11596.1 - 0.068 11.8 0.2 0.093 11.4 0.2 1.2 1 0 0 1 1 1 0 AAA domain DUF3584 PF12128.8 AHX11596.1 - 0.092 10.3 0.1 0.12 9.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_15 PF13175.6 AHX11596.1 - 0.17 11.6 2.2 0.56 9.9 1.0 2.0 1 1 1 2 2 2 0 AAA ATPase domain TsaE PF02367.17 AHX11597.1 - 6.3e-28 97.3 0.0 7.6e-28 97.0 0.0 1.0 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 AHX11597.1 - 0.00072 19.5 0.1 0.00093 19.2 0.1 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 AHX11597.1 - 0.018 15.4 0.0 0.021 15.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 AHX11597.1 - 0.059 13.4 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) KAP_NTPase PF07693.14 AHX11597.1 - 0.16 11.2 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain RNA_helicase PF00910.22 AHX11597.1 - 0.18 12.2 0.0 0.25 11.8 0.0 1.3 1 0 0 1 1 1 0 RNA helicase RNase_HII PF01351.18 AHX11598.1 - 7.1e-29 101.1 0.1 8.9e-29 100.7 0.1 1.1 1 0 0 1 1 1 1 Ribonuclease HII Endonuclease_5 PF04493.14 AHX11598.1 - 0.091 12.4 0.2 0.27 10.9 0.2 1.9 1 1 0 1 1 1 0 Endonuclease V Peptidase_S11 PF00768.20 AHX11601.1 - 4.5e-67 226.0 1.4 5.6e-67 225.7 1.4 1.0 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 AHX11601.1 - 2.5e-10 40.3 0.0 3.1e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family Peptidase_S13 PF02113.15 AHX11601.1 - 0.0006 18.7 1.2 0.032 13.0 0.1 2.1 1 1 0 2 2 2 2 D-Ala-D-Ala carboxypeptidase 3 (S13) family Transketolase_N PF00456.21 AHX11602.1 - 1.7e-118 395.4 0.0 2.4e-118 394.9 0.0 1.1 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Transket_pyr PF02779.24 AHX11602.1 - 3.8e-37 127.7 0.0 7.8e-37 126.7 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain DXP_synthase_N PF13292.6 AHX11602.1 - 1.5e-07 30.9 0.0 7.7e-05 22.0 0.0 2.6 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 AHX11602.1 - 1.9e-06 27.0 0.0 5.2e-06 25.6 0.0 1.6 2 0 0 2 2 2 1 Dehydrogenase E1 component Transketolase_C PF02780.20 AHX11602.1 - 0.0013 18.6 0.1 0.01 15.7 0.0 2.4 2 1 0 2 2 2 1 Transketolase, C-terminal domain TPP_enzyme_C PF02775.21 AHX11602.1 - 0.0014 18.4 0.1 0.0069 16.2 0.1 2.0 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SIS PF01380.22 AHX11602.1 - 0.14 12.0 0.0 0.32 10.9 0.0 1.5 1 0 0 1 1 1 0 SIS domain Proton_antipo_M PF00361.20 AHX11603.1 - 3.9e-47 160.9 29.5 3.9e-47 160.9 29.5 2.8 2 1 0 2 2 2 1 Proton-conducting membrane transporter NADHdeh_related PF10125.9 AHX11603.1 - 1.8e-07 30.8 5.8 5.9e-07 29.1 5.8 2.0 1 0 0 1 1 1 1 NADH dehydrogenase I, subunit N related protein Proton_antipo_N PF00662.20 AHX11603.1 - 0.064 13.3 0.0 0.064 13.3 0.0 2.9 2 0 0 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GIDA PF01134.22 AHX11604.1 - 2.3e-153 510.9 0.6 3.4e-153 510.4 0.6 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A GIDA_assoc PF13932.6 AHX11604.1 - 1.7e-69 234.2 1.3 2.6e-69 233.6 0.3 1.7 2 0 0 2 2 2 1 GidA associated domain FAD_oxidored PF12831.7 AHX11604.1 - 6.5e-09 35.6 0.9 1e-08 35.0 0.9 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AHX11604.1 - 2.1e-08 33.7 0.8 6.9e-08 32.1 1.1 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 AHX11604.1 - 4.1e-05 23.0 2.1 0.0068 15.7 1.4 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 AHX11604.1 - 0.00044 19.6 0.7 0.13 11.5 0.5 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AHX11604.1 - 0.00072 18.4 3.9 0.062 12.0 1.5 3.1 3 0 0 3 3 3 1 HI0933-like protein DAO PF01266.24 AHX11604.1 - 0.0028 17.3 3.5 0.2 11.2 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox PF00070.27 AHX11604.1 - 0.0073 16.8 0.9 0.018 15.6 0.9 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AHX11604.1 - 0.0087 15.2 4.2 0.0087 15.2 4.2 2.4 3 0 0 3 3 3 1 FAD binding domain NAD_binding_9 PF13454.6 AHX11604.1 - 0.026 14.5 0.0 0.026 14.5 0.0 1.9 2 0 0 2 2 2 0 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 AHX11604.1 - 0.61 9.1 3.3 2.1 7.3 1.2 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein Matrilin_ccoil PF10393.9 AHX11606.1 - 0.0016 18.3 1.1 0.015 15.1 0.4 2.3 2 0 0 2 2 2 1 Trimeric coiled-coil oligomerisation domain of matrilin DUF16 PF01519.16 AHX11606.1 - 0.0049 17.3 0.3 0.0078 16.7 0.3 1.4 1 1 0 1 1 1 1 Protein of unknown function DUF16 Spc7 PF08317.11 AHX11606.1 - 0.0076 15.2 2.5 0.0088 15.0 2.5 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein Leptin PF02024.15 AHX11606.1 - 0.011 15.5 0.2 0.013 15.2 0.2 1.1 1 0 0 1 1 1 0 Leptin Nbl1_Borealin_N PF10444.9 AHX11606.1 - 0.022 14.4 2.0 0.81 9.4 0.4 2.2 2 0 0 2 2 2 0 Nbl1 / Borealin N terminal Viral_P18 PF04521.13 AHX11606.1 - 0.034 13.9 0.8 7.2 6.4 0.1 2.2 2 0 0 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein MerR-DNA-bind PF09278.11 AHX11606.1 - 0.039 14.5 2.2 0.73 10.4 0.6 2.1 2 0 0 2 2 2 0 MerR, DNA binding DUF4455 PF14643.6 AHX11606.1 - 0.041 12.5 1.7 1.7 7.2 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4455) DUF1664 PF07889.12 AHX11606.1 - 0.071 13.1 1.2 0.58 10.2 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) NPV_P10 PF05531.12 AHX11606.1 - 0.071 13.6 0.8 0.82 10.2 0.8 2.2 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein LXG PF04740.12 AHX11606.1 - 0.078 12.7 2.3 0.39 10.4 0.2 2.0 1 1 1 2 2 2 0 LXG domain of WXG superfamily FapA PF03961.13 AHX11606.1 - 0.085 11.5 2.7 0.28 9.8 2.7 1.7 1 1 0 1 1 1 0 Flagellar Assembly Protein A FlaC_arch PF05377.11 AHX11606.1 - 0.13 12.7 1.2 16 6.0 0.1 2.3 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) GBR2_CC PF18455.1 AHX11606.1 - 0.19 11.9 0.1 0.19 11.9 0.1 1.9 2 0 0 2 2 2 0 Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain TMPIT PF07851.13 AHX11606.1 - 0.2 10.9 0.6 0.24 10.6 0.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein XhlA PF10779.9 AHX11606.1 - 0.46 10.7 3.4 8.2 6.7 0.2 2.6 2 1 0 2 2 2 0 Haemolysin XhlA LolA PF03548.15 AHX11607.1 - 2.6e-08 33.7 0.0 3.7e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA CX PF01705.19 AHX11607.1 - 0.21 12.1 0.2 1.2 9.7 0.0 2.3 3 0 0 3 3 3 0 CX module CTP_transf_like PF01467.26 AHX11608.1 - 4.7e-16 59.3 0.0 6.2e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase-like DHHA1 PF02272.19 AHX11609.1 - 1.6e-20 73.9 2.7 1.8e-20 73.7 1.0 2.0 2 0 0 2 2 2 1 DHHA1 domain RecJ_OB PF17768.1 AHX11609.1 - 9.4e-19 67.7 0.0 1.8e-18 66.8 0.0 1.5 1 0 0 1 1 1 1 RecJ OB domain DHH PF01368.20 AHX11609.1 - 6.6e-10 39.1 0.1 1.4e-09 38.1 0.1 1.5 1 0 0 1 1 1 1 DHH family Toprim PF01751.22 AHX11609.1 - 0.11 12.7 0.0 0.43 10.8 0.0 2.0 1 0 0 1 1 1 0 Toprim domain Complex1_51K PF01512.17 AHX11610.1 - 2.4e-50 170.4 0.0 4.9e-50 169.4 0.0 1.5 2 0 0 2 2 2 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.9 AHX11610.1 - 1.4e-29 102.0 0.0 2.4e-29 101.2 0.0 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SLBB PF10531.9 AHX11610.1 - 8.1e-07 28.8 0.1 1.6e-06 27.8 0.1 1.5 1 0 0 1 1 1 1 SLBB domain Mur_ligase_M PF08245.12 AHX11611.1 - 1.4e-10 41.5 0.0 2.6e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 AHX11611.1 - 0.00049 20.3 0.0 0.001 19.3 0.0 1.5 1 0 0 1 1 1 1 Mur ligase family, glutamate ligase domain MnmE_helical PF12631.7 AHX11612.1 - 1.9e-45 155.6 2.3 2.6e-45 155.1 2.3 1.2 1 0 0 1 1 1 1 MnmE helical domain TrmE_N PF10396.9 AHX11612.1 - 3.9e-34 117.4 0.0 1e-33 116.0 0.0 1.8 2 0 0 2 2 1 1 GTP-binding protein TrmE N-terminus MMR_HSR1 PF01926.23 AHX11612.1 - 1.2e-23 83.3 0.1 3.4e-23 81.9 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 AHX11612.1 - 2.3e-10 40.2 0.0 5.2e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 AHX11612.1 - 3.3e-06 27.3 0.1 0.0013 18.9 0.0 2.5 1 1 1 2 2 2 2 Dynamin family GTP_EFTU PF00009.27 AHX11612.1 - 0.00044 19.8 0.1 0.84 9.1 0.0 3.4 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 AHX11612.1 - 0.00089 19.2 0.2 0.11 12.5 0.0 3.2 3 0 0 3 3 3 1 C-terminal region of MMR_HSR1 domain Arf PF00025.21 AHX11612.1 - 0.0016 17.9 0.7 0.014 14.9 0.1 2.5 2 1 0 2 2 2 1 ADP-ribosylation factor family AAA_18 PF13238.6 AHX11612.1 - 0.0026 18.3 0.1 0.009 16.6 0.0 2.2 2 1 0 2 2 2 1 AAA domain ABC_tran PF00005.27 AHX11612.1 - 0.0039 17.7 0.0 0.011 16.3 0.0 1.8 2 0 0 2 2 2 1 ABC transporter AAA_28 PF13521.6 AHX11612.1 - 0.0098 16.1 0.0 0.016 15.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AHX11612.1 - 0.013 15.5 0.5 0.45 10.4 0.0 3.0 3 0 0 3 3 3 0 RsgA GTPase DUF4581 PF15167.6 AHX11612.1 - 0.027 14.6 0.2 0.33 11.1 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4581) NOG1 PF06858.14 AHX11612.1 - 0.11 12.3 0.1 3.2 7.6 0.0 2.9 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) Bac_surface_Ag PF01103.23 AHX11613.1 - 7.9e-47 160.3 2.3 1.5e-46 159.4 2.3 1.5 1 0 0 1 1 1 1 Surface antigen POTRA PF07244.15 AHX11613.1 - 1.8e-44 150.2 21.3 1e-12 48.4 1.2 5.5 5 0 0 5 5 5 5 Surface antigen variable number repeat POTRA_1 PF08478.10 AHX11613.1 - 6.8e-08 32.7 2.9 0.079 13.3 0.0 4.1 4 0 0 4 4 4 3 POTRA domain, FtsQ-type POTRA_2 PF08479.11 AHX11613.1 - 0.0021 17.9 0.9 2 8.3 0.0 4.1 5 0 0 5 5 5 2 POTRA domain, ShlB-type Peptidase_M50 PF02163.22 AHX11614.1 - 4.3e-71 239.1 1.5 4.9e-71 238.9 1.5 1.0 1 0 0 1 1 1 1 Peptidase family M50 PDZ_6 PF17820.1 AHX11614.1 - 1.1e-12 47.6 0.0 1.9e-12 46.8 0.0 1.5 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 AHX11614.1 - 1.5e-08 34.8 0.0 3.8e-08 33.5 0.0 1.7 2 0 0 2 2 2 1 PDZ domain PDZ PF00595.24 AHX11614.1 - 2.4e-07 31.0 0.1 9.5e-07 29.1 0.0 1.9 2 0 0 2 2 2 1 PDZ domain Peptidase_M50B PF13398.6 AHX11614.1 - 0.00016 21.4 0.1 0.00016 21.4 0.1 2.7 3 1 0 3 3 3 1 Peptidase M50B-like DUF3267 PF11667.8 AHX11614.1 - 0.027 14.8 0.1 0.027 14.8 0.1 3.0 4 0 0 4 4 4 0 Putative zincin peptidase GHMP_kinases_N PF00288.26 AHX11615.1 - 3.4e-07 30.4 1.0 5.8e-07 29.7 1.0 1.4 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 AHX11615.1 - 1.9e-05 25.0 0.0 3.7e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 GHMP kinases C terminal BspA_v PF18220.1 AHX11615.1 - 0.085 13.0 0.0 2.6 8.1 0.0 2.2 2 0 0 2 2 2 0 Adhesin BspA variable domain DNA_gyraseB PF00204.25 AHX11616.1 - 2.5e-56 189.9 0.0 4e-56 189.2 0.0 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 AHX11616.1 - 2.8e-27 94.7 0.0 5.7e-27 93.7 0.0 1.5 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 AHX11616.1 - 1.6e-22 80.1 0.3 6.1e-22 78.2 0.2 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 AHX11616.1 - 2.4e-17 63.0 0.0 4.1e-16 59.1 0.0 2.5 2 0 0 2 2 2 1 Toprim domain HATPase_c_3 PF13589.6 AHX11616.1 - 0.00013 21.8 0.1 0.00025 20.9 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim_4 PF13662.6 AHX11616.1 - 0.047 14.2 0.0 0.2 12.1 0.0 2.1 1 0 0 1 1 1 0 Toprim domain AhpC-TSA PF00578.21 AHX11618.1 - 1.2e-29 102.7 0.0 1.4e-29 102.5 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 AHX11618.1 - 3.3e-15 56.1 0.0 3.4e-15 56.0 0.0 1.0 1 0 0 1 1 1 1 Redoxin DUF899 PF05988.12 AHX11618.1 - 0.00075 19.1 0.0 0.00089 18.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) AhpC-TSA_2 PF13911.6 AHX11618.1 - 0.022 14.9 0.0 0.033 14.3 0.0 1.3 1 1 0 1 1 1 0 AhpC/TSA antioxidant enzyme CoA_binding_3 PF13727.6 AHX11618.1 - 0.077 13.0 0.0 0.15 12.0 0.0 1.4 2 0 0 2 2 2 0 CoA-binding domain SSF PF00474.17 AHX11619.1 - 1.5e-48 165.7 31.7 3.1e-48 164.6 31.7 1.5 1 1 0 1 1 1 1 Sodium:solute symporter family Prenyltrans PF00432.21 AHX11619.1 - 0.11 12.3 0.1 0.22 11.3 0.1 1.5 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat Pentapeptide_4 PF13599.6 AHX11620.1 - 7.2e-39 131.8 35.9 6.2e-07 29.5 3.8 7.4 2 1 4 7 7 7 7 Pentapeptide repeats (9 copies) Pentapeptide PF00805.22 AHX11620.1 - 2.6e-23 81.3 32.7 2.1e-05 24.0 0.4 12.1 7 5 5 12 12 12 8 Pentapeptide repeats (8 copies) Pentapeptide_3 PF13576.6 AHX11620.1 - 1.5e-14 53.8 42.3 4.4e-05 23.6 1.5 9.8 6 3 4 10 10 10 5 Pentapeptide repeats (9 copies) CfAFP PF05264.11 AHX11620.1 - 0.0006 19.8 26.1 0.21 11.6 0.7 5.4 2 1 5 7 7 7 4 Choristoneura fumiferana antifreeze protein (CfAFP) Guanylate_kin PF00625.21 AHX11621.1 - 2e-41 141.7 0.1 2.4e-41 141.4 0.1 1.1 1 0 0 1 1 1 1 Guanylate kinase AAA_18 PF13238.6 AHX11621.1 - 4.1e-05 24.1 0.0 8.3e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 AHX11621.1 - 0.00028 20.9 0.2 0.0013 18.8 0.2 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 AHX11621.1 - 0.00052 20.2 0.1 0.0093 16.1 0.1 2.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AHX11621.1 - 0.0014 18.9 0.5 0.11 12.8 0.0 2.9 2 1 1 3 3 3 1 AAA domain NTPase_1 PF03266.15 AHX11621.1 - 0.011 15.7 0.1 0.033 14.1 0.0 1.9 2 0 0 2 2 2 0 NTPase AAA_16 PF13191.6 AHX11621.1 - 0.046 14.1 0.0 0.096 13.1 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 AHX11621.1 - 0.071 12.8 0.0 0.098 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Stathmin PF00836.19 AHX11621.1 - 0.082 12.9 2.8 0.14 12.2 2.8 1.3 1 0 0 1 1 1 0 Stathmin family AAA PF00004.29 AHX11621.1 - 0.083 13.3 0.1 0.16 12.4 0.1 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 AHX11621.1 - 0.085 13.4 0.0 0.12 12.9 0.0 1.6 1 1 0 1 1 1 0 ABC transporter AAA_19 PF13245.6 AHX11621.1 - 0.1 13.0 0.0 0.2 12.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_31 PF13614.6 AHX11621.1 - 0.12 12.2 0.9 0.26 11.2 0.9 1.8 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AHX11621.1 - 0.13 12.1 0.5 0.37 10.7 0.0 1.9 3 0 0 3 3 3 0 RsgA GTPase AAA_23 PF13476.6 AHX11621.1 - 7.3 7.0 12.7 2.9e+02 1.8 12.7 2.2 1 1 0 1 1 1 0 AAA domain SBP_bac_11 PF13531.6 AHX11623.1 - 0.075 12.8 0.0 8.3 6.1 0.0 2.1 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein Citrate_synt PF00285.21 AHX11624.1 - 1.9e-122 408.8 0.0 2.2e-122 408.6 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF5446 PF17522.2 AHX11624.1 - 0.18 12.0 0.2 0.39 10.9 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5446) PGM_PMM_I PF02878.16 AHX11625.1 - 1.2e-36 125.4 0.0 3.1e-36 124.1 0.0 1.7 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 AHX11625.1 - 2.8e-24 85.5 0.0 4.9e-24 84.7 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 AHX11625.1 - 1.9e-17 63.8 0.0 4.5e-17 62.5 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 AHX11625.1 - 0.00026 21.1 0.0 0.0008 19.5 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Fibritin_C PF07921.12 AHX11625.1 - 0.11 12.6 0.1 0.27 11.4 0.1 1.6 1 0 0 1 1 1 0 Fibritin C-terminal region RbsD_FucU PF05025.13 AHX11625.1 - 0.12 12.8 0.0 0.32 11.4 0.0 1.7 1 0 0 1 1 1 0 RbsD / FucU transport protein family NHL PF01436.21 AHX11625.1 - 0.27 11.4 1.1 0.85 9.8 0.5 2.2 2 0 0 2 2 2 0 NHL repeat SurA_N_3 PF13624.6 AHX11626.1 - 6.5e-06 26.0 1.2 1.6e-05 24.7 1.2 1.6 1 1 0 1 1 1 1 SurA N-terminal domain SurA_N_2 PF13623.6 AHX11626.1 - 0.00019 21.3 0.3 0.00049 20.0 0.1 1.8 1 1 1 2 2 2 1 SurA N-terminal domain Rotamase PF00639.21 AHX11626.1 - 0.0012 19.7 0.0 0.0039 18.1 0.0 1.9 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 AHX11626.1 - 0.026 15.3 0.0 0.062 14.1 0.0 1.7 1 1 0 1 1 1 0 PPIC-type PPIASE domain DUF3211 PF11485.8 AHX11626.1 - 0.066 13.4 1.4 0.62 10.3 0.2 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3211) Enolase_C PF00113.22 AHX11627.1 - 3.6e-98 328.5 0.6 4.5e-98 328.1 0.6 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 AHX11627.1 - 5e-46 156.1 0.0 8.4e-46 155.4 0.0 1.4 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 AHX11627.1 - 5.1e-12 45.8 0.0 6.8e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 AHX11627.1 - 7.3e-06 25.3 0.2 1.6e-05 24.2 0.2 1.5 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus Pyrophosphatase PF00719.19 AHX11628.1 - 1.4e-46 158.2 0.0 1.7e-46 157.9 0.0 1.1 1 0 0 1 1 1 1 Inorganic pyrophosphatase Transpeptidase PF00905.22 AHX11629.1 - 7.3e-53 179.8 0.0 9.9e-53 179.3 0.0 1.1 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 AHX11629.1 - 4e-14 53.4 0.1 1e-13 52.1 0.1 1.7 1 0 0 1 1 1 1 Penicillin-binding Protein dimerisation domain DNA_pol_B_exo2 PF10108.9 AHX11630.1 - 6.4e-69 231.9 0.6 7.7e-69 231.6 0.6 1.1 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RNase_H_2 PF13482.6 AHX11630.1 - 6.9e-09 35.9 0.3 2.3e-08 34.2 0.1 2.0 2 1 0 2 2 2 1 RNase_H superfamily DNA_pol_B_exo1 PF03104.19 AHX11630.1 - 0.007 15.5 0.1 0.011 14.9 0.1 1.3 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain HH_signal PF01085.18 AHX11630.1 - 0.026 14.2 0.1 0.052 13.2 0.1 1.5 2 0 0 2 2 2 0 Hedgehog amino-terminal signalling domain tRNA-synt_1c PF00749.21 AHX11631.1 - 1.2e-80 270.8 0.0 1.2e-43 149.2 0.0 2.1 1 1 1 2 2 2 2 tRNA synthetases class I (E and Q), catalytic domain G3P_acyltransf PF02660.15 AHX11632.1 - 7.9e-41 139.8 16.9 8.9e-41 139.7 16.9 1.0 1 0 0 1 1 1 1 Glycerol-3-phosphate acyltransferase MreB_Mbl PF06723.13 AHX11633.1 - 6.2e-139 462.4 6.8 7.2e-139 462.2 6.8 1.0 1 0 0 1 1 1 1 MreB/Mbl protein HSP70 PF00012.20 AHX11633.1 - 4.4e-14 51.6 1.0 1e-13 50.4 0.4 1.9 2 1 0 2 2 2 1 Hsp70 protein FtsA PF14450.6 AHX11633.1 - 1.3e-11 44.9 1.1 4.7e-11 43.0 0.8 2.0 2 0 0 2 2 2 1 Cell division protein FtsA PilM_2 PF11104.8 AHX11633.1 - 9e-10 38.1 0.1 2.1e-05 23.7 0.0 2.4 2 1 0 2 2 2 2 Type IV pilus assembly protein PilM; Actin PF00022.19 AHX11633.1 - 2.4e-08 33.0 0.0 3.4e-07 29.2 0.0 2.0 1 1 0 2 2 2 1 Actin EutA PF06277.11 AHX11633.1 - 0.00041 19.3 1.2 0.00085 18.3 1.2 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation protein EutA DDR PF08841.10 AHX11633.1 - 0.026 13.5 1.7 0.056 12.4 1.6 1.6 1 1 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain T4SS-DNA_transf PF02534.14 AHX11634.1 - 3.2e-144 481.2 0.0 4.2e-144 480.8 0.0 1.0 1 0 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer TraG-D_C PF12696.7 AHX11634.1 - 4.7e-27 94.5 0.0 8.7e-27 93.6 0.0 1.5 1 0 0 1 1 1 1 TraM recognition site of TraD and TraG TrwB_AAD_bind PF10412.9 AHX11634.1 - 1.3e-23 83.6 0.0 2e-23 83.0 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain DUF1641 PF07849.11 AHX11634.1 - 0.064 13.2 0.0 0.24 11.3 0.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1641) Astro_capsid_p PF12226.8 AHX11634.1 - 1.3 8.1 5.6 1.7 7.7 5.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein FYDLN_acid PF09538.10 AHX11634.1 - 9.3 7.0 11.6 17 6.2 11.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) T2SSE PF00437.20 AHX11635.1 - 2.9e-82 275.8 0.1 3.3e-82 275.6 0.1 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_28 PF13521.6 AHX11635.1 - 0.00037 20.8 0.0 0.00058 20.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 AHX11635.1 - 0.0026 17.3 0.0 0.0051 16.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region Mg_chelatase PF01078.21 AHX11635.1 - 0.0038 16.6 0.0 0.011 15.2 0.0 1.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI FtsK_SpoIIIE PF01580.18 AHX11635.1 - 0.0044 16.4 0.2 0.031 13.6 0.2 2.2 1 1 1 2 2 2 1 FtsK/SpoIIIE family Dynamin_N PF00350.23 AHX11635.1 - 0.023 14.8 0.1 0.041 13.9 0.1 1.5 1 0 0 1 1 1 0 Dynamin family IstB_IS21 PF01695.17 AHX11635.1 - 0.035 13.8 0.0 0.059 13.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein TrwB_AAD_bind PF10412.9 AHX11635.1 - 0.054 12.4 0.1 0.12 11.3 0.0 1.5 1 1 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_16 PF13191.6 AHX11635.1 - 0.063 13.7 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 AHX11635.1 - 0.072 13.0 0.1 0.13 12.1 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase PPV_E1_C PF00519.17 AHX11635.1 - 0.11 11.3 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 Papillomavirus helicase RNA_helicase PF00910.22 AHX11635.1 - 0.12 12.8 0.0 0.23 11.8 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 AHX11635.1 - 0.14 11.9 0.0 0.28 10.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Septin PF00735.18 AHX11635.1 - 0.14 11.4 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 Septin Zeta_toxin PF06414.12 AHX11635.1 - 0.14 11.4 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin TsaE PF02367.17 AHX11635.1 - 0.17 11.9 0.0 0.31 11.0 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TrbI PF03743.14 AHX11636.1 - 1.6e-49 168.3 4.0 2.3e-49 167.8 4.0 1.2 1 0 0 1 1 1 1 Bacterial conjugation TrbI-like protein CagX PF03524.15 AHX11637.1 - 7e-52 176.2 1.2 8e-52 176.0 1.2 1.0 1 0 0 1 1 1 1 Conjugal transfer protein UvrD_C_2 PF13538.6 AHX11637.1 - 0.034 14.0 0.0 0.16 11.8 0.0 2.0 2 0 0 2 2 2 0 UvrD-like helicase C-terminal domain VirB8 PF04335.13 AHX11638.1 - 1.9e-49 168.4 0.9 2.1e-49 168.2 0.9 1.0 1 0 0 1 1 1 1 VirB8 protein TraE PF05309.11 AHX11638.1 - 0.6 9.5 4.2 1.6 8.1 4.2 1.7 1 1 0 1 1 1 0 TraE protein GTP_cyclohydro2 PF00925.20 AHX11639.1 - 5e-57 192.0 0.0 7.7e-57 191.4 0.0 1.3 1 0 0 1 1 1 1 GTP cyclohydrolase II DUF2862 PF11061.8 AHX11639.1 - 0.058 13.2 0.0 1.4 8.9 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2862) DAP_epimerase PF01678.19 AHX11640.1 - 2.5e-26 92.2 0.0 1.8e-14 54.0 0.0 2.1 2 0 0 2 2 2 2 Diaminopimelate epimerase DivIC PF04977.15 AHX11641.1 - 3.4e-09 36.3 1.7 4e-09 36.1 1.7 1.1 1 0 0 1 1 1 1 Septum formation initiator Jag_N PF14804.6 AHX11641.1 - 0.041 14.2 0.3 0.078 13.3 0.2 1.5 1 1 0 1 1 1 0 Jag N-terminus Adenylsucc_synt PF00709.21 AHX11641.1 - 0.056 12.3 0.1 0.062 12.2 0.1 1.0 1 0 0 1 1 1 0 Adenylosuccinate synthetase Transket_pyr PF02779.24 AHX11643.1 - 8.3e-51 172.2 0.1 1.1e-50 171.8 0.1 1.1 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 AHX11643.1 - 7e-38 129.3 0.0 1.3e-37 128.4 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain Pentaxin PF00354.17 AHX11643.1 - 0.13 12.0 0.0 3.7 7.2 0.0 2.1 2 0 0 2 2 2 0 Pentaxin family DUF4164 PF13747.6 AHX11644.1 - 0.01 16.1 8.7 0.014 15.7 8.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) ZapA PF05164.13 AHX11645.1 - 8.1e-11 42.2 1.6 9.7e-11 42.0 1.6 1.1 1 0 0 1 1 1 1 Cell division protein ZapA Trigger_N PF05697.13 AHX11646.1 - 2.2e-17 63.7 1.1 2.2e-17 63.7 1.1 2.5 3 1 1 4 4 4 1 Bacterial trigger factor protein (TF) Trigger_C PF05698.14 AHX11646.1 - 1.3e-12 48.0 12.6 1.8e-09 37.8 4.1 3.7 3 1 0 3 3 3 2 Bacterial trigger factor protein (TF) C-terminus FKBP_C PF00254.28 AHX11646.1 - 8.3e-12 45.3 0.1 4.8e-11 42.8 0.0 2.3 2 0 0 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase CLP_protease PF00574.23 AHX11647.1 - 4.9e-82 274.2 0.1 5.7e-82 274.0 0.1 1.0 1 0 0 1 1 1 1 Clp protease AAA_2 PF07724.14 AHX11648.1 - 1.5e-48 165.2 0.0 2.5e-48 164.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 AHX11648.1 - 2e-17 63.9 0.0 7.8e-17 61.9 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 AHX11648.1 - 1e-15 57.5 0.1 2.3e-15 56.4 0.1 1.6 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein zf-C4_ClpX PF06689.13 AHX11648.1 - 1.8e-14 53.3 3.4 1.8e-14 53.3 3.4 2.2 3 0 0 3 3 2 1 ClpX C4-type zinc finger AAA_5 PF07728.14 AHX11648.1 - 8e-08 32.4 0.0 1.7e-06 28.1 0.0 2.8 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) Sigma54_activ_2 PF14532.6 AHX11648.1 - 5.6e-06 26.5 0.0 1.3e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activat PF00158.26 AHX11648.1 - 8.8e-06 25.5 0.0 0.0063 16.2 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 AHX11648.1 - 1.2e-05 25.6 0.5 0.0002 21.7 0.1 2.6 2 1 0 2 2 2 1 AAA domain MCM PF00493.23 AHX11648.1 - 0.0001 21.5 0.1 0.00017 20.7 0.1 1.4 1 0 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 AHX11648.1 - 0.00042 19.8 0.0 0.017 14.5 0.0 2.6 2 1 1 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 AHX11648.1 - 0.00045 19.8 0.0 0.00094 18.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_14 PF13173.6 AHX11648.1 - 0.00047 20.2 0.0 0.00097 19.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.12 AHX11648.1 - 0.00057 19.7 0.0 0.0019 18.0 0.0 1.9 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_15 PF13175.6 AHX11648.1 - 0.00099 18.9 0.6 0.02 14.6 0.1 2.2 1 1 2 3 3 3 1 AAA ATPase domain AAA_24 PF13479.6 AHX11648.1 - 0.002 17.9 0.0 0.0032 17.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AHX11648.1 - 0.0063 17.0 0.0 0.011 16.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AHX11648.1 - 0.011 16.2 0.1 0.057 13.8 0.0 2.0 2 1 0 2 2 2 0 AAA ATPase domain IstB_IS21 PF01695.17 AHX11648.1 - 0.013 15.2 0.0 0.029 14.1 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Rad17 PF03215.15 AHX11648.1 - 0.013 15.4 0.0 0.034 14.1 0.0 1.7 1 1 0 1 1 1 0 Rad17 P-loop domain ABC_tran PF00005.27 AHX11648.1 - 0.014 15.9 0.0 0.031 14.8 0.0 1.6 1 0 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 AHX11648.1 - 0.018 15.5 0.0 0.043 14.2 0.0 1.7 1 1 0 1 1 1 0 RNA helicase ATPase PF06745.13 AHX11648.1 - 0.018 14.4 2.7 0.2 10.9 0.1 2.7 2 1 1 3 3 3 0 KaiC TsaE PF02367.17 AHX11648.1 - 0.028 14.4 0.0 0.077 13.0 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 AHX11648.1 - 0.035 13.2 0.0 0.058 12.4 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 AHX11648.1 - 0.05 13.5 0.0 0.17 11.8 0.0 1.9 2 0 0 2 2 2 0 NACHT domain PhoH PF02562.16 AHX11648.1 - 0.054 12.9 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein DEAD PF00270.29 AHX11648.1 - 0.061 13.1 0.1 0.7 9.6 0.0 2.3 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_29 PF13555.6 AHX11648.1 - 0.08 12.7 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 AHX11648.1 - 0.1 13.1 0.0 0.21 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.7 AHX11648.1 - 0.12 11.2 0.0 0.24 10.3 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_33 PF13671.6 AHX11648.1 - 0.15 12.2 0.0 0.34 11.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain Terminase_6 PF03237.15 AHX11648.1 - 0.17 11.5 0.1 0.64 9.6 0.0 1.8 1 1 0 2 2 2 0 Terminase-like family MreC PF04085.14 AHX11649.1 - 1e-10 41.7 0.2 1.8e-10 40.9 0.2 1.4 1 0 0 1 1 1 1 rod shape-determining protein MreC tRNA_synt_2f PF02092.17 AHX11650.1 - 2.3e-141 472.3 0.0 2.8e-141 472.1 0.0 1.1 1 0 0 1 1 1 1 Glycyl-tRNA synthetase beta subunit DALR_1 PF05746.15 AHX11650.1 - 5.4e-06 26.6 0.0 1.4e-05 25.3 0.0 1.6 1 0 0 1 1 1 1 DALR anticodon binding domain tRNA-synt_2e PF02091.15 AHX11651.1 - 1.6e-122 408.1 0.0 1.8e-122 407.9 0.0 1.0 1 0 0 1 1 1 1 Glycyl-tRNA synthetase alpha subunit N-glycanase_C PF09113.10 AHX11651.1 - 0.0042 16.9 0.4 0.0073 16.1 0.4 1.3 1 0 0 1 1 1 1 Peptide-N-glycosidase F, C terminal Aminotran_1_2 PF00155.21 AHX11652.1 - 4.1e-69 233.5 0.0 4.6e-69 233.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AHX11652.1 - 2e-09 37.2 0.0 7.5e-09 35.4 0.0 1.8 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 AHX11652.1 - 0.00037 19.6 0.0 0.0009 18.3 0.0 1.6 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 AHX11652.1 - 0.00066 18.3 0.0 0.0011 17.6 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme SSB PF00436.25 AHX11653.1 - 1.7e-36 124.4 2.0 2.4e-36 123.9 2.0 1.1 1 0 0 1 1 1 1 Single-strand binding protein family COQ9 PF08511.11 AHX11654.1 - 9.5e-21 73.4 0.1 2.1e-20 72.3 0.1 1.6 1 0 0 1 1 1 1 COQ9 TAL_FSA PF00923.19 AHX11655.1 - 2.5e-54 184.6 0.1 1e-53 182.6 0.1 1.7 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase ATP-synt_DE_N PF02823.16 AHX11656.1 - 4.4e-11 42.5 0.0 5.3e-11 42.3 0.0 1.1 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATP-synt_ab PF00006.25 AHX11657.1 - 3.4e-61 206.6 0.0 4.6e-61 206.2 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 AHX11657.1 - 4.4e-19 68.8 0.1 9.4e-19 67.7 0.1 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain ATPase PF06745.13 AHX11657.1 - 0.0017 17.8 0.2 0.0048 16.3 0.1 1.8 2 0 0 2 2 2 1 KaiC NB-ARC PF00931.22 AHX11657.1 - 0.0096 15.1 0.6 0.034 13.3 0.1 1.9 2 0 0 2 2 2 1 NB-ARC domain AAA_16 PF13191.6 AHX11657.1 - 0.011 16.2 0.0 0.031 14.7 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 AHX11657.1 - 0.011 15.6 0.1 0.022 14.7 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase T3SS_ATPase_C PF18269.1 AHX11657.1 - 0.018 14.9 0.1 0.16 11.8 0.0 2.2 2 0 0 2 2 2 0 T3SS EscN ATPase C-terminal domain ATPase_2 PF01637.18 AHX11657.1 - 0.03 14.3 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ResIII PF04851.15 AHX11657.1 - 0.077 13.0 0.1 13 5.7 0.1 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit ABC_tran PF00005.27 AHX11657.1 - 0.15 12.6 0.1 0.37 11.3 0.1 1.7 1 0 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 AHX11657.1 - 0.2 12.1 0.0 0.45 10.9 0.0 1.6 1 0 0 1 1 1 0 RNA helicase CagE_TrbE_VirB PF03135.14 AHX11660.1 - 6.8e-06 26.3 0.0 1.7e-05 25.0 0.0 1.7 1 0 0 1 1 1 1 CagE, TrbE, VirB family, component of type IV transporter system TrbC PF04956.13 AHX11661.1 - 3.2e-15 56.1 9.2 3.6e-15 56.0 9.2 1.0 1 0 0 1 1 1 1 TrbC/VIRB2 family TrbC PF04956.13 AHX11662.1 - 3.6e-15 56.0 10.9 4.2e-15 55.8 10.9 1.1 1 0 0 1 1 1 1 TrbC/VIRB2 family TrbC PF04956.13 AHX11663.1 - 1.7e-17 63.4 6.9 2e-17 63.2 6.9 1.1 1 0 0 1 1 1 1 TrbC/VIRB2 family GTP_EFTU PF00009.27 AHX11664.1 - 3.3e-52 176.8 0.2 5e-52 176.3 0.2 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain LepA_C PF06421.12 AHX11664.1 - 8.8e-46 154.5 0.5 1.6e-45 153.7 0.5 1.4 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus EFG_C PF00679.24 AHX11664.1 - 1e-20 73.5 0.0 2.7e-20 72.2 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 AHX11664.1 - 8.1e-11 42.2 2.0 9.1e-11 42.0 0.4 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 EFG_II PF14492.6 AHX11664.1 - 2.3e-06 27.6 0.0 7.6e-06 25.9 0.0 1.9 1 1 0 1 1 1 1 Elongation Factor G, domain II MMR_HSR1 PF01926.23 AHX11664.1 - 7.5e-06 26.0 0.0 1.5e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 AHX11664.1 - 0.00011 21.8 0.0 0.0002 21.0 0.0 1.4 1 0 0 1 1 1 1 Ras family Septin PF00735.18 AHX11664.1 - 0.0034 16.7 0.2 2.2 7.5 0.2 2.4 2 0 0 2 2 2 2 Septin SRPRB PF09439.10 AHX11664.1 - 0.0062 16.0 0.0 0.013 14.9 0.0 1.6 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 AHX11664.1 - 0.01 16.1 0.0 0.049 13.9 0.0 2.0 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1_Xtn PF16897.5 AHX11664.1 - 0.011 15.8 0.0 0.024 14.6 0.0 1.6 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain RF3_C PF16658.5 AHX11664.1 - 0.026 14.3 0.0 0.051 13.4 0.0 1.4 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain tRNA-synt_1f PF01921.18 AHX11665.1 - 4e-120 401.0 0.0 5.3e-120 400.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 AHX11665.1 - 0.0043 15.8 0.0 0.0075 15.1 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 AHX11665.1 - 0.038 12.3 0.0 0.052 11.8 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) tRNA-synt_1b PF00579.25 AHX11665.1 - 0.052 12.9 0.0 2.2 7.5 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) ThiF PF00899.21 AHX11667.1 - 8.5e-58 195.6 0.1 1.1e-57 195.2 0.1 1.0 1 0 0 1 1 1 1 ThiF family Shikimate_DH PF01488.20 AHX11667.1 - 0.003 17.6 0.1 0.017 15.2 0.0 1.9 1 1 1 2 2 2 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 AHX11667.1 - 0.0038 17.5 0.9 0.13 12.5 0.2 2.8 1 1 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain DUF373 PF04123.13 AHX11667.1 - 0.079 12.4 0.0 0.3 10.5 0.0 1.6 1 1 0 2 2 2 0 Domain of unknown function (DUF373) NAD_binding_7 PF13241.6 AHX11667.1 - 0.09 13.2 0.0 0.21 12.1 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding Pyr_redox_2 PF07992.14 AHX11668.1 - 1.2e-30 106.8 0.0 1.4e-30 106.5 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AHX11668.1 - 5.6e-25 88.2 0.5 2.1e-20 73.2 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AHX11668.1 - 4.5e-12 46.4 1.0 5.2e-09 36.5 0.0 2.6 3 0 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AHX11668.1 - 1.4e-09 37.2 0.8 0.00039 19.2 0.2 2.8 3 0 0 3 3 3 2 HI0933-like protein FAD_oxidored PF12831.7 AHX11668.1 - 1.8e-06 27.6 0.0 2.5e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 AHX11668.1 - 7.4e-06 25.8 1.1 0.078 12.5 0.7 2.5 1 1 1 2 2 2 2 FAD dependent oxidoreductase K_oxygenase PF13434.6 AHX11668.1 - 0.0002 20.6 0.3 0.0033 16.6 0.0 2.5 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 AHX11668.1 - 0.00026 21.2 0.0 0.00062 20.0 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 AHX11668.1 - 0.0007 18.8 0.2 0.49 9.4 0.1 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_binding_2 PF00890.24 AHX11668.1 - 0.0012 18.1 0.3 0.11 11.5 0.2 2.8 3 0 0 3 3 3 1 FAD binding domain DUF5076 PF16826.5 AHX11668.1 - 0.0012 18.7 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5076) Thi4 PF01946.17 AHX11668.1 - 0.0015 17.9 0.6 0.0045 16.3 0.2 2.0 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 AHX11668.1 - 0.0043 16.4 0.4 0.014 14.7 0.2 1.8 2 0 0 2 2 2 1 FAD binding domain NAD_binding_9 PF13454.6 AHX11668.1 - 0.0045 17.0 1.1 0.093 12.7 0.0 2.5 2 0 0 2 2 2 1 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 AHX11668.1 - 0.047 13.0 0.0 0.094 12.0 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FMO-like PF00743.19 AHX11668.1 - 0.08 11.3 0.0 0.12 10.8 0.0 1.1 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like XdhC_C PF13478.6 AHX11668.1 - 0.082 13.4 0.0 1.3 9.6 0.0 2.2 2 0 0 2 2 2 0 XdhC Rossmann domain Lycopene_cycl PF05834.12 AHX11668.1 - 0.11 11.5 0.2 3.2 6.7 0.2 2.2 1 1 0 2 2 2 0 Lycopene cyclase protein Transposase_20 PF02371.16 AHX11668.1 - 0.12 12.8 0.0 9 6.7 0.0 2.6 2 0 0 2 2 2 0 Transposase IS116/IS110/IS902 family tRNA-synt_His PF13393.6 AHX11669.1 - 2.4e-36 125.6 0.0 3.5e-36 125.1 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 AHX11669.1 - 1.6e-13 51.0 0.0 4e-13 49.7 0.0 1.6 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.20 AHX11669.1 - 5.7e-06 26.0 0.1 1.3e-05 24.8 0.0 1.6 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) HGTP_anticodon PF03129.20 AHX11669.1 - 0.00085 19.4 0.0 0.0019 18.3 0.0 1.6 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2 PF00152.20 AHX11669.1 - 0.093 11.8 0.0 3.8 6.5 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class II (D, K and N) BolA PF01722.18 AHX11670.1 - 2.8e-22 78.8 0.0 3.1e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 BolA-like protein Sugar_tr PF00083.24 AHX11671.1 - 1.7e-15 56.9 30.2 4.7e-10 38.9 6.3 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 AHX11671.1 - 1.8e-08 33.7 34.9 1.8e-08 33.7 34.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF5592 PF17332.2 AHX11671.1 - 4.9 7.8 6.6 11 6.6 5.6 2.2 1 1 0 1 1 1 0 Family of unknown function (DUF5592) Peptidase_S24 PF00717.23 AHX11673.1 - 2.8e-19 68.8 0.1 4.5e-19 68.2 0.1 1.3 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 AHX11673.1 - 3.4e-08 33.4 0.0 0.0017 18.1 0.0 2.7 1 1 0 2 2 2 2 Signal peptidase, peptidase S26 Radical_SAM PF04055.21 AHX11674.1 - 2e-21 77.1 0.0 6.9e-21 75.3 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 AHX11674.1 - 1.6e-14 53.7 0.1 5.1e-14 52.1 0.1 1.8 1 1 0 1 1 1 1 Uncharacterized protein family UPF0004 DUF2183 PF09949.9 AHX11674.1 - 0.01 16.2 0.1 0.27 11.6 0.0 2.7 2 1 1 3 3 3 1 Uncharacterized conserved protein (DUF2183) Octopine_DH PF02317.17 AHX11677.1 - 0.034 14.2 0.0 0.5 10.4 0.0 2.4 2 0 0 2 2 2 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain SK_channel PF03530.14 AHX11678.1 - 0.02 14.9 0.8 0.036 14.1 0.8 1.5 1 0 0 1 1 1 0 Calcium-activated SK potassium channel DUF2560 PF10834.8 AHX11678.1 - 0.2 11.9 0.2 0.2 11.9 0.2 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2560) Dip PF17679.1 AHX11679.1 - 0.044 13.4 0.1 0.067 12.8 0.1 1.2 1 0 0 1 1 1 0 gp37/Dip protein Ferrochelatase PF00762.19 AHX11680.1 - 1.6e-89 300.1 0.0 1.9e-89 299.9 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase Ribosomal_S20p PF01649.18 AHX11682.1 - 2.8e-11 43.9 0.9 3e-11 43.8 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S20 Mur_ligase PF01225.25 AHX11683.1 - 1.5e-17 63.7 0.0 6.9e-17 61.6 0.0 2.1 2 0 0 2 2 2 1 Mur ligase family, catalytic domain Mur_ligase_C PF02875.21 AHX11683.1 - 1.1e-16 60.9 0.0 5.5e-14 52.2 0.0 2.9 3 0 0 3 3 3 2 Mur ligase family, glutamate ligase domain Mur_ligase_M PF08245.12 AHX11683.1 - 1.6e-16 60.9 0.0 3.7e-16 59.7 0.0 1.6 1 1 0 1 1 1 1 Mur ligase middle domain CbiA PF01656.23 AHX11683.1 - 0.0087 16.1 0.5 3 7.9 0.0 2.9 3 1 0 3 3 3 2 CobQ/CobB/MinD/ParA nucleotide binding domain OMPdecase PF00215.24 AHX11684.1 - 7.9e-32 110.7 0.0 8.9e-32 110.5 0.0 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family TerC PF03741.16 AHX11685.1 - 1.3e-33 116.2 18.4 1.8e-33 115.7 18.4 1.2 1 0 0 1 1 1 1 Integral membrane protein TerC family DUF475 PF04332.15 AHX11685.1 - 6.6e-05 22.8 14.8 9.1e-05 22.4 14.8 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF475) TB2_DP1_HVA22 PF03134.19 AHX11685.1 - 0.99 9.4 6.5 0.74 9.8 1.0 2.8 2 1 0 2 2 2 0 TB2/DP1, HVA22 family Carboxyl_trans PF01039.22 AHX11687.1 - 4.7e-171 569.7 0.0 5.7e-171 569.5 0.0 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 AHX11687.1 - 0.00015 21.3 0.0 0.00037 20.1 0.0 1.5 1 0 0 1 1 1 1 Malonate decarboxylase gamma subunit (MdcE) OEP PF02321.18 AHX11689.1 - 1.2e-46 159.0 7.5 1.5e-26 93.4 5.5 2.0 2 0 0 2 2 2 2 Outer membrane efflux protein GcpE PF04551.14 AHX11690.1 - 1.7e-97 326.7 0.0 2e-97 326.4 0.0 1.0 1 0 0 1 1 1 1 GcpE protein Inositol_P PF00459.25 AHX11691.1 - 1.8e-10 40.8 0.0 1.5e-09 37.8 0.0 2.0 1 1 0 1 1 1 1 Inositol monophosphatase family Herpes_UL36 PF03586.13 AHX11692.1 - 0.031 13.6 0.1 0.18 11.1 0.0 2.0 2 0 0 2 2 2 0 Herpesvirus UL36 tegument protein E1_dh PF00676.20 AHX11693.1 - 1.4e-86 290.2 0.0 1.7e-86 289.9 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 AHX11693.1 - 1.6e-06 27.5 0.2 2.4e-06 27.0 0.2 1.3 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 AHX11693.1 - 0.0044 16.8 2.2 0.022 14.6 2.4 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UbiA PF01040.18 AHX11694.1 - 9.3e-38 130.0 19.8 1.1e-37 129.7 19.8 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Flavin_Reduct PF01613.18 AHX11695.1 - 9e-24 84.3 0.0 1.2e-23 83.9 0.0 1.2 1 0 0 1 1 1 1 Flavin reductase like domain RE_NgoFVII PF09565.10 AHX11695.1 - 0.08 12.2 0.0 0.088 12.1 0.0 1.1 1 0 0 1 1 1 0 NgoFVII restriction endonuclease DapB_N PF01113.20 AHX11696.1 - 1.1e-13 51.4 0.0 3.3e-13 49.8 0.0 1.8 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus DapB_C PF05173.14 AHX11696.1 - 2.8e-06 27.3 0.0 3.9e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_C PF05173.14 AHX11697.1 - 2.9e-15 56.3 0.0 3.1e-15 56.2 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus ABC_tran PF00005.27 AHX11698.1 - 5.5e-30 104.7 0.0 7.4e-30 104.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AHX11698.1 - 2.9e-12 47.0 0.0 5.9e-07 29.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AHX11698.1 - 2.1e-08 33.9 1.0 1.4e-06 27.9 1.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AHX11698.1 - 2.6e-07 30.7 0.1 0.00043 20.1 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 AHX11698.1 - 0.00069 20.2 0.0 0.0019 18.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 AHX11698.1 - 0.0012 18.8 0.1 0.0036 17.2 0.0 1.8 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 AHX11698.1 - 0.0033 17.2 0.0 0.0063 16.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AHX11698.1 - 0.0041 17.4 0.1 0.0081 16.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AHX11698.1 - 0.0053 17.2 0.0 0.0083 16.5 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain TniB PF05621.11 AHX11698.1 - 0.035 13.5 0.0 1.1 8.6 0.0 2.9 2 1 1 3 3 3 0 Bacterial TniB protein AAA_13 PF13166.6 AHX11698.1 - 0.039 12.6 0.0 0.13 10.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 AHX11698.1 - 0.05 12.8 0.1 0.11 11.7 0.1 1.6 1 1 0 1 1 1 0 NB-ARC domain Ras PF00071.22 AHX11698.1 - 0.085 12.4 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 Ras family DUF5442 PF17514.2 AHX11698.1 - 0.11 12.7 0.3 0.3 11.3 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5442) SmpB PF01668.18 AHX11700.1 - 5.2e-54 182.0 1.5 6.4e-54 181.7 1.5 1.0 1 0 0 1 1 1 1 SmpB protein AIRS_C PF02769.22 AHX11701.1 - 6.4e-28 97.8 1.2 3.5e-23 82.5 0.1 2.6 2 1 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 AHX11701.1 - 9.8e-17 61.4 0.0 2.1e-11 44.3 0.0 2.7 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 AHX11701.1 - 1.2e-09 38.5 0.7 2.8e-09 37.3 0.7 1.7 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain Propep_M14 PF02244.16 AHX11701.1 - 0.15 12.4 0.7 0.91 10.0 0.0 2.6 3 0 0 3 3 3 0 Carboxypeptidase activation peptide SH3_4 PF06347.13 AHX11702.1 - 2.1e-08 33.9 0.3 5.3e-05 23.0 0.1 2.3 2 0 0 2 2 2 2 Bacterial SH3 domain SH3_3 PF08239.11 AHX11702.1 - 0.047 14.0 0.2 0.09 13.1 0.2 1.5 1 0 0 1 1 1 0 Bacterial SH3 domain MFS_1 PF07690.16 AHX11703.1 - 8.4e-18 64.4 40.4 7.5e-11 41.5 28.6 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Acatn PF13000.7 AHX11703.1 - 2.8e-07 29.4 12.9 2.3e-05 23.1 3.4 2.4 1 1 1 2 2 2 2 Acetyl-coenzyme A transporter 1 DUF423 PF04241.15 AHX11703.1 - 0.27 11.5 0.0 0.27 11.5 0.0 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF423) CPSase_L_D2 PF02786.17 AHX11704.1 - 2.2e-79 265.9 1.0 3.9e-79 265.0 1.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 AHX11704.1 - 1.4e-41 141.5 0.0 4.4e-41 139.9 0.0 1.9 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 AHX11704.1 - 7.5e-34 116.1 0.0 3.4e-33 114.0 0.0 2.2 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 AHX11704.1 - 1.9e-20 72.4 1.2 2.6e-19 68.8 1.1 2.8 2 0 0 2 2 2 1 Biotin-requiring enzyme Dala_Dala_lig_C PF07478.13 AHX11704.1 - 3e-13 49.8 0.1 5.9e-13 48.8 0.1 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Biotin_lipoyl_2 PF13533.6 AHX11704.1 - 6.4e-10 38.7 0.0 0.00039 20.2 0.0 3.0 2 1 1 3 3 3 2 Biotin-lipoyl like ATP-grasp PF02222.22 AHX11704.1 - 6.4e-08 32.4 0.1 1.3e-07 31.3 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 AHX11704.1 - 2.9e-07 30.3 1.6 7.2e-07 29.0 0.3 2.2 2 1 0 2 2 2 1 RimK-like ATP-grasp domain HlyD_D23 PF16576.5 AHX11704.1 - 2.9e-06 26.7 0.1 0.0091 15.2 0.0 2.5 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AHX11704.1 - 0.00022 21.9 0.1 0.35 11.6 0.0 3.3 3 0 0 3 3 3 1 HlyD family secretion protein ATP-grasp_3 PF02655.14 AHX11704.1 - 0.00097 19.2 0.1 0.0019 18.3 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain PTS_EIIA_1 PF00358.20 AHX11704.1 - 0.0024 17.6 0.2 10 5.9 0.0 3.7 2 1 1 3 3 3 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PCC_BT PF18140.1 AHX11704.1 - 0.007 16.7 0.0 0.025 14.9 0.0 1.9 2 0 0 2 2 2 1 Propionyl-coenzyme A carboxylase BT domain Oxidored_nitro PF00148.19 AHX11704.1 - 0.017 13.9 0.1 3.8 6.1 0.0 2.5 3 0 0 3 3 3 0 Nitrogenase component 1 type Oxidoreductase Peptidase_M23 PF01551.22 AHX11704.1 - 0.031 14.5 1.1 1.2 9.4 0.1 3.1 2 1 1 3 3 3 0 Peptidase family M23 GARS_A PF01071.19 AHX11704.1 - 0.036 13.8 0.0 0.086 12.6 0.0 1.6 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RnfC_N PF13375.6 AHX11704.1 - 0.096 12.7 0.2 1.9 8.5 0.2 2.9 2 1 0 2 2 2 0 RnfC Barrel sandwich hybrid domain Pribosyltran_N PF13793.6 AHX11705.1 - 5.6e-23 81.1 0.0 8.7e-22 77.2 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 AHX11705.1 - 7.6e-21 75.0 4.1 7e-18 65.3 0.6 2.9 2 1 1 3 3 3 2 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 AHX11705.1 - 2.4e-14 53.1 1.6 1.9e-13 50.2 0.4 2.2 2 0 0 2 2 2 1 Phosphoribosyl transferase domain NifU PF01106.17 AHX11706.1 - 1.9e-29 101.6 0.1 3.6e-29 100.7 0.1 1.5 1 0 0 1 1 1 1 NifU-like domain Nfu_N PF08712.11 AHX11706.1 - 5.2e-28 96.9 0.0 8.7e-28 96.2 0.0 1.3 1 0 0 1 1 1 1 Scaffold protein Nfu/NifU N terminal PcfK PF14058.6 AHX11706.1 - 0.17 12.1 0.5 0.27 11.5 0.1 1.5 2 0 0 2 2 2 0 PcfK-like protein DnaJ PF00226.31 AHX11707.1 - 1.1e-09 38.3 0.2 2.6e-09 37.1 0.0 1.7 2 0 0 2 2 2 1 DnaJ domain Pam16 PF03656.13 AHX11707.1 - 0.0002 21.4 0.4 0.00062 19.8 0.1 1.8 1 1 1 2 2 2 1 Pam16 SCIMP PF15050.6 AHX11707.1 - 0.0078 16.7 0.5 0.011 16.1 0.5 1.4 1 1 0 1 1 1 1 SCIMP protein DUF4358 PF14270.6 AHX11707.1 - 0.022 15.0 0.3 0.027 14.8 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4358) AI-2E_transport PF01594.16 AHX11707.1 - 0.025 13.7 1.5 0.029 13.5 1.5 1.0 1 0 0 1 1 1 0 AI-2E family transporter DUF4834 PF16118.5 AHX11707.1 - 0.028 15.4 2.6 0.038 15.0 2.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DUF2852 PF11014.8 AHX11707.1 - 0.029 14.5 0.8 0.093 12.9 0.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2852) Popeye PF04831.13 AHX11707.1 - 0.037 14.2 0.5 0.045 13.9 0.5 1.3 1 1 0 1 1 1 0 Popeye protein conserved region Lectin_N PF03954.14 AHX11707.1 - 0.05 13.3 0.3 0.063 13.0 0.3 1.3 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain SIT PF15330.6 AHX11707.1 - 0.081 13.4 0.2 0.12 12.8 0.2 1.4 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT Fer4 PF00037.27 AHX11709.1 - 2.1e-15 55.8 16.0 3.2e-09 36.2 4.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 AHX11709.1 - 2.1e-13 50.6 9.8 3.2e-13 50.1 9.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 AHX11709.1 - 1.7e-11 44.9 5.0 6.3e-06 27.0 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 AHX11709.1 - 2.3e-11 43.7 2.3 6.7e-05 22.9 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 AHX11709.1 - 2.4e-10 40.3 20.7 7.6e-07 29.2 12.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 AHX11709.1 - 1.3e-09 38.1 10.0 2e-09 37.4 10.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 AHX11709.1 - 6e-09 36.2 18.1 2.9e-05 24.4 11.5 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 AHX11709.1 - 8.3e-08 32.0 17.7 0.00023 21.1 5.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 AHX11709.1 - 1.3e-07 31.3 11.1 0.0013 18.7 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 AHX11709.1 - 2e-06 27.9 10.7 0.00017 21.8 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 AHX11709.1 - 3.9e-05 24.1 11.7 0.0035 17.9 12.4 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain c-SKI_SMAD_bind PF08782.10 AHX11709.1 - 0.0017 18.6 5.6 0.11 12.7 0.5 2.2 1 1 1 2 2 2 2 c-SKI Smad4 binding domain Fer4_13 PF13370.6 AHX11709.1 - 0.0023 18.4 14.9 0.15 12.6 2.9 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 AHX11709.1 - 0.0033 18.2 16.5 0.0087 16.9 4.2 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.6 AHX11709.1 - 0.004 17.3 8.2 0.16 12.2 1.0 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.13 AHX11709.1 - 0.015 15.5 4.6 0.18 12.0 0.3 2.2 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_22 PF17179.4 AHX11709.1 - 0.17 12.7 11.4 1.5 9.7 1.7 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain THF_DHG_CYH_C PF02882.19 AHX11710.1 - 4.8e-61 204.7 4.6 7.3e-61 204.2 4.6 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 AHX11710.1 - 4.9e-37 126.7 0.6 7.8e-37 126.1 0.6 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NLE PF08154.12 AHX11710.1 - 0.015 15.8 0.1 0.029 14.9 0.1 1.4 1 0 0 1 1 1 0 NLE (NUC135) domain COX4 PF02936.14 AHX11711.1 - 0.0011 19.1 1.8 0.24 11.4 0.0 3.7 3 0 0 3 3 3 1 Cytochrome c oxidase subunit IV RFXA_RFXANK_bdg PF15289.6 AHX11711.1 - 0.016 15.6 34.5 0.29 11.5 0.6 5.9 1 1 5 6 6 6 0 Regulatory factor X-associated C-terminal binding domain DUF3042 PF11240.8 AHX11711.1 - 0.09 12.8 0.2 4.2 7.5 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3042) SNAP-25 PF00835.19 AHX11711.1 - 0.31 11.3 5.0 19 5.7 0.2 4.0 2 1 3 5 5 5 0 SNAP-25 family RFXA_RFXANK_bdg PF15289.6 AHX11712.1 - 0.00017 21.9 29.5 0.074 13.4 0.8 5.6 2 1 3 5 5 5 4 Regulatory factor X-associated C-terminal binding domain COX4 PF02936.14 AHX11712.1 - 0.0038 17.3 5.6 0.23 11.4 0.0 4.1 4 0 0 4 4 4 1 Cytochrome c oxidase subunit IV PPP1R35_C PF15503.6 AHX11712.1 - 0.047 13.5 5.3 3.1 7.6 0.1 3.5 2 1 1 3 3 3 0 Protein phosphatase 1 regulatory subunit 35 C-terminus DUF896 PF05979.12 AHX11712.1 - 0.31 10.9 6.6 3.9 7.4 1.2 2.9 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF896) DUF4449 PF14613.6 AHX11712.1 - 3.5 7.7 25.3 3.5 7.7 3.6 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF4449) RFXA_RFXANK_bdg PF15289.6 AHX11713.1 - 9.9e-08 32.4 47.3 0.014 15.7 2.1 7.3 1 1 6 7 7 7 5 Regulatory factor X-associated C-terminal binding domain PPP1R35_C PF15503.6 AHX11713.1 - 6.3e-05 22.8 12.7 1.5 8.6 0.1 5.1 4 1 0 4 4 4 4 Protein phosphatase 1 regulatory subunit 35 C-terminus DUF896 PF05979.12 AHX11713.1 - 0.017 14.9 18.3 4.8 7.1 0.5 5.0 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF896) Metallophos PF00149.28 AHX11715.1 - 2.3e-14 54.4 1.3 4.8e-14 53.3 1.3 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 AHX11715.1 - 2.9e-07 30.8 0.0 6.7e-07 29.6 0.0 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PhoD PF09423.10 AHX11715.1 - 0.0081 15.2 0.0 0.012 14.6 0.0 1.2 1 0 0 1 1 1 1 PhoD-like phosphatase PD40 PF07676.12 AHX11716.1 - 2.6e-32 110.1 10.2 2.3e-09 36.9 0.1 6.5 6 0 0 6 6 6 5 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 AHX11716.1 - 3.4e-09 35.9 0.0 0.0096 14.7 0.0 4.9 1 1 2 4 4 4 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region TolB_N PF04052.13 AHX11716.1 - 3.1e-07 30.5 0.1 8.4e-07 29.1 0.1 1.8 1 0 0 1 1 1 1 TolB amino-terminal domain Pectate_lyase22 PF14583.6 AHX11716.1 - 2.8e-06 26.3 0.0 0.0089 14.7 0.1 2.4 1 1 1 2 2 2 2 Oligogalacturonate lyase Gmad1 PF10647.9 AHX11716.1 - 0.00052 19.8 0.0 0.034 13.9 0.0 2.9 1 1 3 4 4 4 2 Lipoprotein LpqB beta-propeller domain eIF2A PF08662.11 AHX11716.1 - 0.026 14.4 0.0 5.9 6.7 0.0 3.1 1 1 2 3 3 3 0 Eukaryotic translation initiation factor eIF2A ANAPC4_WD40 PF12894.7 AHX11716.1 - 0.03 14.6 0.0 2.8 8.3 0.0 3.2 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain DUF4467 PF14729.6 AHX11716.1 - 0.1 13.0 0.0 0.7 10.3 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function with cystatin-like fold (DUF4467) Proteasome_A_N PF10584.9 AHX11716.1 - 0.67 9.7 4.4 57 3.5 0.1 4.4 4 0 0 4 4 4 0 Proteasome subunit A N-terminal signature Aminotran_1_2 PF00155.21 AHX11717.1 - 5.6e-70 236.3 0.0 6.4e-70 236.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 AHX11717.1 - 6e-09 34.9 0.0 9.4e-09 34.3 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AHX11717.1 - 0.0011 18.0 0.0 0.0017 17.4 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 AHX11717.1 - 0.0033 16.8 0.1 0.0045 16.3 0.1 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DUF1843 PF08898.10 AHX11717.1 - 0.13 12.7 0.1 28 5.3 0.0 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1843) Ribosomal_S21 PF01165.20 AHX11718.1 - 3.8e-08 32.9 8.4 1e-07 31.6 8.4 1.8 1 1 0 1 1 1 1 Ribosomal protein S21 CcmE PF03100.15 AHX11719.1 - 9.1e-22 77.4 0.0 1e-21 77.3 0.0 1.0 1 0 0 1 1 1 1 CcmE Lactamase_B PF00753.27 AHX11720.1 - 2.5e-12 47.2 1.5 4.1e-12 46.5 1.5 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 AHX11720.1 - 1.5e-11 44.0 0.1 3.6e-10 39.6 0.1 2.5 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 AHX11720.1 - 1.6e-07 31.1 0.2 1.6e-07 31.1 0.2 1.7 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Gly_acyl_tr_C PF08444.10 AHX11720.1 - 0.12 12.6 0.0 14 6.0 0.0 2.8 2 0 0 2 2 2 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region ssDNA-exonuc_C PF10141.9 AHX11720.1 - 0.15 11.7 0.0 0.28 10.8 0.0 1.4 1 0 0 1 1 1 0 Single-strand DNA-specific exonuclease, C terminal domain B-block_TFIIIC PF04182.12 AHX11720.1 - 0.67 10.1 2.3 2.2 8.5 0.1 2.7 3 0 0 3 3 3 0 B-block binding subunit of TFIIIC Radical_SAM PF04055.21 AHX11722.1 - 2.2e-30 106.2 0.0 6.2e-30 104.8 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 AHX11722.1 - 1.1e-29 102.3 1.2 2e-29 101.5 1.2 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 AHX11722.1 - 0.001 19.0 0.0 0.0024 17.8 0.0 1.7 1 0 0 1 1 1 1 TRAM domain TRAM_2 PF18693.1 AHX11722.1 - 0.0042 17.2 0.2 0.022 14.9 0.0 2.3 2 1 0 2 2 2 1 TRAM domain Ribosomal_S9 PF00380.19 AHX11724.1 - 1e-43 148.7 0.0 1.2e-43 148.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.18 AHX11725.1 - 2.2e-50 170.1 0.0 2.6e-50 169.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L13 Colicin_V PF02674.16 AHX11726.1 - 2.2e-20 73.1 1.7 2.8e-20 72.7 1.7 1.1 1 0 0 1 1 1 1 Colicin V production protein DUF3437 PF11919.8 AHX11726.1 - 0.0032 17.3 0.0 0.0075 16.2 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3437) DctM PF06808.12 AHX11727.1 - 5.1e-73 246.3 51.9 1.5e-70 238.2 51.9 2.2 1 1 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component DUF3394 PF11874.8 AHX11727.1 - 5.2e-44 150.1 0.0 9e-44 149.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3394) A-2_8-polyST PF07388.11 AHX11727.1 - 0.0053 15.4 0.1 0.011 14.4 0.1 1.4 1 0 0 1 1 1 1 Alpha-2,8-polysialyltransferase (POLYST) Sod_Fe_C PF02777.18 AHX11728.1 - 2e-35 121.0 3.4 3.2e-35 120.4 0.1 2.3 2 1 1 3 3 3 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 AHX11728.1 - 2.4e-26 92.0 0.5 4.6e-26 91.1 0.5 1.5 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Peptidase_M22 PF00814.25 AHX11729.1 - 7.9e-05 22.5 0.0 9.4e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family MFS_1 PF07690.16 AHX11730.1 - 1.1e-24 87.0 52.9 1.5e-24 86.6 52.9 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Aldolase_II PF00596.21 AHX11731.1 - 2.4e-39 135.2 0.1 2.9e-39 135.0 0.1 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Aminotran_3 PF00202.21 AHX11732.1 - 2.3e-96 323.0 0.1 3.2e-96 322.5 0.1 1.2 1 0 0 1 1 1 1 Aminotransferase class-III Rsa3 PF14615.6 AHX11732.1 - 0.079 12.5 0.1 0.29 10.8 0.0 2.0 2 0 0 2 2 2 0 Ribosome-assembly protein 3 Pro_isomerase PF00160.21 AHX11733.1 - 4e-49 166.9 0.1 4.4e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SAICAR_synt PF01259.18 AHX11734.1 - 4.3e-61 206.7 0.1 4.8e-61 206.6 0.1 1.0 1 0 0 1 1 1 1 SAICAR synthetase Lum_binding PF00677.17 AHX11735.1 - 7.7e-43 144.4 1.0 3.3e-22 78.3 0.2 2.1 2 0 0 2 2 2 2 Lumazine binding domain LGT PF01790.18 AHX11736.1 - 3.5e-68 229.4 10.6 4e-68 229.3 10.6 1.0 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase COX15-CtaA PF02628.15 AHX11737.1 - 3e-92 309.2 13.0 3.4e-92 309.0 13.0 1.0 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein TrbL PF04610.14 AHX11741.1 - 1.3e-19 70.9 21.7 1.3e-19 70.9 21.7 1.8 2 0 0 2 2 2 1 TrbL/VirB6 plasmid conjugal transfer protein TrbL PF04610.14 AHX11742.1 - 3.7e-25 88.9 29.6 1.3e-24 87.1 24.5 2.2 2 0 0 2 2 2 2 TrbL/VirB6 plasmid conjugal transfer protein CagA PF03507.13 AHX11742.1 - 5.5e-07 29.7 2.9 6.5 6.6 0.0 4.4 4 0 0 4 4 4 4 CagA exotoxin TrbL PF04610.14 AHX11743.1 - 2.3e-25 89.6 27.4 2.3e-25 89.6 27.4 1.8 1 1 1 2 2 2 1 TrbL/VirB6 plasmid conjugal transfer protein TrbL PF04610.14 AHX11744.1 - 5.5e-15 55.7 22.4 5.5e-15 55.7 22.4 4.3 4 0 0 4 4 4 2 TrbL/VirB6 plasmid conjugal transfer protein CagE_TrbE_VirB PF03135.14 AHX11745.1 - 2.5e-56 191.0 0.4 1.4e-55 188.6 0.0 2.4 2 1 1 3 3 3 1 CagE, TrbE, VirB family, component of type IV transporter system AAA_10 PF12846.7 AHX11745.1 - 1.8e-09 37.0 0.0 0.0018 17.2 0.0 2.5 2 0 0 2 2 2 2 AAA-like domain AAA_23 PF13476.6 AHX11745.1 - 2.2e-06 28.3 2.0 0.00014 22.4 0.0 3.1 3 0 0 3 3 3 1 AAA domain FtsK_SpoIIIE PF01580.18 AHX11745.1 - 0.00032 20.1 0.0 0.00068 19.1 0.0 1.5 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_22 PF13401.6 AHX11745.1 - 0.00065 20.0 0.0 0.021 15.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AHX11745.1 - 0.0086 15.8 0.0 0.023 14.4 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain TrwB_AAD_bind PF10412.9 AHX11745.1 - 0.0092 14.9 0.0 0.023 13.6 0.0 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain ABC_tran PF00005.27 AHX11745.1 - 0.0099 16.4 0.0 0.063 13.8 0.0 2.3 2 0 0 2 2 2 1 ABC transporter AAA_16 PF13191.6 AHX11745.1 - 0.018 15.5 0.0 0.17 12.3 0.0 2.4 2 0 0 2 2 2 0 AAA ATPase domain ResIII PF04851.15 AHX11745.1 - 0.02 14.9 0.0 0.13 12.2 0.0 2.2 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit T2SSE PF00437.20 AHX11745.1 - 0.026 13.6 1.0 0.039 13.0 0.0 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_7 PF12775.7 AHX11745.1 - 0.03 13.9 0.0 0.061 12.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF87 PF01935.17 AHX11745.1 - 0.031 14.4 0.1 0.28 11.2 0.0 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_14 PF13173.6 AHX11745.1 - 0.039 14.0 0.4 15 5.6 0.0 2.9 3 0 0 3 3 3 0 AAA domain DEAD PF00270.29 AHX11745.1 - 0.051 13.3 0.1 2.6 7.8 0.0 2.7 3 0 0 3 3 3 0 DEAD/DEAH box helicase AAA PF00004.29 AHX11745.1 - 0.094 13.1 0.5 2.8 8.4 0.0 3.0 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 AHX11745.1 - 0.12 12.1 0.0 0.29 10.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 AHX11745.1 - 0.15 11.6 0.0 0.39 10.3 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain VirB3 PF05101.13 AHX11746.1 - 1.7e-06 28.1 0.0 1.9e-06 28.0 0.0 1.0 1 0 0 1 1 1 1 Type IV secretory pathway, VirB3-like protein ABC_tran PF00005.27 AHX11747.1 - 8.7e-34 117.0 0.1 1.5e-33 116.2 0.1 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AHX11747.1 - 5.3e-26 91.9 15.5 6.9e-26 91.5 15.5 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 AHX11747.1 - 2e-06 27.4 3.8 0.00011 21.8 0.2 2.3 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain DUF87 PF01935.17 AHX11747.1 - 0.0017 18.5 0.1 0.012 15.7 0.0 2.1 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_29 PF13555.6 AHX11747.1 - 0.0029 17.3 0.4 0.007 16.1 0.4 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AHX11747.1 - 0.0072 16.2 0.0 0.022 14.7 0.0 1.8 1 0 0 1 1 1 1 RsgA GTPase AAA_10 PF12846.7 AHX11747.1 - 0.01 14.8 0.1 0.066 12.1 0.0 1.9 2 0 0 2 2 2 0 AAA-like domain AAA_22 PF13401.6 AHX11747.1 - 0.017 15.4 1.2 0.18 12.1 1.2 2.2 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AHX11747.1 - 0.017 14.9 0.5 0.03 14.0 0.5 1.4 1 0 0 1 1 1 0 AAA ATPase domain TniB PF05621.11 AHX11747.1 - 0.021 14.2 0.4 2.9 7.3 0.0 2.5 3 0 0 3 3 3 0 Bacterial TniB protein NB-ARC PF00931.22 AHX11747.1 - 0.025 13.8 0.3 1.7 7.7 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain CbiA PF01656.23 AHX11747.1 - 0.032 14.3 0.1 0.14 12.2 0.1 2.0 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_18 PF13238.6 AHX11747.1 - 0.045 14.3 0.0 0.12 12.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain DUF4528 PF15031.6 AHX11747.1 - 0.049 13.7 1.6 0.19 11.8 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4528) G-alpha PF00503.20 AHX11747.1 - 0.056 12.6 0.1 0.085 12.0 0.1 1.3 1 0 0 1 1 1 0 G-protein alpha subunit AAA_16 PF13191.6 AHX11747.1 - 0.16 12.3 0.1 0.35 11.2 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain Patatin PF01734.22 AHX11748.1 - 4.6e-29 102.1 0.2 1e-28 100.9 0.2 1.6 1 1 0 1 1 1 1 Patatin-like phospholipase Orthopox_F14 PF06076.12 AHX11748.1 - 0.074 13.3 0.1 0.47 10.7 0.0 2.2 2 0 0 2 2 2 0 Orthopoxvirus F14 protein DNA_gyraseB PF00204.25 AHX11748.1 - 0.14 11.6 0.0 0.25 10.8 0.0 1.3 1 0 0 1 1 1 0 DNA gyrase B DUF2207 PF09972.9 AHX11749.1 - 0.22 10.3 1.7 2.9 6.6 0.1 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) MFS_2 PF13347.6 AHX11749.1 - 0.54 8.8 0.0 0.54 8.8 0.0 2.4 2 1 0 3 3 3 0 MFS/sugar transport protein DUF2749 PF10907.8 AHX11749.1 - 0.75 10.0 2.1 3.4 7.9 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) EphA2_TM PF14575.6 AHX11749.1 - 2.7 8.9 5.0 54 4.8 0.0 3.2 3 1 1 4 4 4 0 Ephrin type-A receptor 2 transmembrane domain SUR7 PF06687.12 AHX11749.1 - 4.3 6.9 14.7 22 4.6 0.5 2.6 1 1 1 3 3 3 0 SUR7/PalI family Abhydrolase_1 PF00561.20 AHX11750.1 - 4.2e-15 56.1 0.1 2.7e-14 53.4 0.1 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AHX11750.1 - 5.8e-11 42.1 0.0 9.3e-11 41.4 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 AHX11750.1 - 1.7e-09 38.7 0.0 2.5e-09 38.0 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family DUF676 PF05057.14 AHX11750.1 - 0.00011 21.8 0.0 0.00017 21.2 0.0 1.2 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF1057 PF06342.12 AHX11750.1 - 0.00057 19.0 0.0 0.00077 18.6 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1057) TcA_TcB_BD PF18276.1 AHX11750.1 - 0.0054 15.9 0.0 1.7 7.6 0.0 2.3 2 1 0 2 2 2 2 Tc toxin complex TcA C-terminal TcB-binding domain Acyl_transf_2 PF02273.15 AHX11750.1 - 0.014 14.7 0.1 0.023 13.9 0.1 1.3 1 0 0 1 1 1 0 Acyl transferase DUF915 PF06028.11 AHX11750.1 - 0.029 13.7 0.0 1.3 8.3 0.0 2.5 3 0 0 3 3 3 0 Alpha/beta hydrolase of unknown function (DUF915) Esterase PF00756.20 AHX11750.1 - 0.041 13.5 0.4 0.13 11.9 0.4 1.8 1 1 0 1 1 1 0 Putative esterase DUF5413 PF17434.2 AHX11750.1 - 0.1 12.9 0.1 2.6 8.4 0.0 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5413) DLH PF01738.18 AHX11750.1 - 0.17 11.4 0.0 2.6 7.6 0.1 2.4 2 1 0 2 2 2 0 Dienelactone hydrolase family OMP_b-brl PF13505.6 AHX11751.1 - 8e-06 26.1 4.8 1.1e-05 25.6 4.8 1.3 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain Surface_Ag_2 PF01617.17 AHX11753.1 - 1.2e-09 38.0 5.5 5.4e-08 32.6 5.5 2.0 1 1 0 1 1 1 1 Surface antigen OMP_b-brl PF13505.6 AHX11753.1 - 2.4e-07 31.1 5.6 3.7e-07 30.4 5.6 1.4 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain SecG PF03840.14 AHX11754.1 - 3.2e-11 43.1 11.8 5e-11 42.5 11.8 1.3 1 0 0 1 1 1 1 Preprotein translocase SecG subunit DUF5134 PF17197.4 AHX11754.1 - 0.031 14.2 0.8 0.064 13.1 0.7 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5134) ATP-synt_8 PF00895.20 AHX11754.1 - 0.79 10.2 2.5 6.3 7.3 0.1 2.2 2 0 0 2 2 2 0 ATP synthase protein 8 ODV-E18 PF10717.9 AHX11754.1 - 3.5 7.5 7.1 0.99 9.3 3.1 1.9 1 1 1 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 DUF4389 PF14333.6 AHX11754.1 - 4.7 7.2 10.3 4.7 7.2 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4389) CTP_synth_N PF06418.14 AHX11755.1 - 1.1e-101 339.6 0.2 1.4e-101 339.2 0.2 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 AHX11755.1 - 5.5e-50 169.8 0.0 9.2e-50 169.1 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 AHX11755.1 - 5.9e-05 22.9 1.0 0.28 10.9 0.0 3.1 2 1 1 3 3 3 2 Peptidase C26 Y_phosphatase3 PF13350.6 AHX11756.1 - 0.00096 19.2 0.0 0.0048 16.9 0.0 2.1 2 0 0 2 2 2 1 Tyrosine phosphatase family DUF5314 PF17241.2 AHX11756.1 - 0.0079 15.9 0.3 0.09 12.4 0.0 2.2 2 0 0 2 2 2 1 Family of unknown function (DUF5314) NusB PF01029.18 AHX11757.1 - 3.4e-12 46.7 0.1 4.2e-12 46.5 0.1 1.1 1 0 0 1 1 1 1 NusB family DUF1450 PF07293.11 AHX11757.1 - 0.018 14.8 0.0 0.13 12.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1450) Maf PF02545.14 AHX11758.1 - 1.6e-43 148.5 0.0 1.8e-43 148.3 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein Anth_synt_I_N PF04715.13 AHX11758.1 - 0.11 12.7 0.1 0.54 10.5 0.0 2.1 2 1 0 2 2 2 0 Anthranilate synthase component I, N terminal region eIF-1a PF01176.19 AHX11759.1 - 2.7e-17 62.3 1.0 3.2e-17 62.1 1.0 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DUF1125 PF06563.11 AHX11759.1 - 0.0058 16.5 0.2 0.0089 15.9 0.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1125) AhpC-TSA PF00578.21 AHX11760.1 - 7.7e-16 58.1 0.0 1.5e-15 57.2 0.0 1.5 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 AHX11760.1 - 6.3e-10 39.0 0.0 7.5e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_2 PF13098.6 AHX11760.1 - 0.0027 18.2 0.1 0.0042 17.5 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 AHX11760.1 - 0.097 13.0 0.1 0.16 12.3 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like Na_H_Exchanger PF00999.21 AHX11761.1 - 6.7e-62 209.5 56.0 9.4e-62 209.0 56.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 AHX11761.1 - 1.5e-23 83.2 0.5 3.6e-23 82.0 0.5 1.7 1 0 0 1 1 1 1 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 AHX11761.1 - 4.2e-05 23.2 0.1 8.3e-05 22.2 0.1 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Gp_dh_N PF00044.24 AHX11761.1 - 0.0017 18.7 0.7 0.0049 17.2 0.7 1.9 1 1 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 AHX11761.1 - 0.0052 16.9 0.1 0.013 15.6 0.1 1.6 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 AHX11761.1 - 0.0073 15.7 0.0 0.013 14.9 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PglD_N PF17836.1 AHX11761.1 - 0.028 15.1 0.1 0.066 13.9 0.1 1.6 1 0 0 1 1 1 0 PglD N-terminal domain Sacchrp_dh_NADP PF03435.18 AHX11761.1 - 0.069 13.4 0.1 0.14 12.4 0.1 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 AHX11761.1 - 0.14 12.6 0.2 0.28 11.7 0.2 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding DUF4179 PF13786.6 AHX11761.1 - 0.73 10.3 5.5 3.8 8.1 0.7 3.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4179) GMP_synt_C PF00958.22 AHX11762.1 - 4.9e-39 132.3 0.0 1.2e-38 131.1 0.0 1.7 1 0 0 1 1 1 1 GMP synthase C terminal domain GATase PF00117.28 AHX11762.1 - 1.1e-27 97.1 0.0 1.8e-27 96.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 AHX11762.1 - 5.6e-09 36.1 0.0 2.1e-08 34.2 0.0 2.0 1 1 0 1 1 1 1 Peptidase C26 NAD_synthase PF02540.17 AHX11762.1 - 1.8e-05 24.0 0.0 0.0048 16.0 0.0 2.3 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.16 AHX11762.1 - 0.0063 15.4 0.0 0.01 14.6 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase ThiI PF02568.14 AHX11762.1 - 0.007 16.0 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) GATase_3 PF07685.14 AHX11762.1 - 0.016 14.8 0.0 0.04 13.5 0.0 1.7 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ATP_bind_3 PF01171.20 AHX11762.1 - 0.035 13.9 0.0 0.063 13.0 0.0 1.4 1 0 0 1 1 1 0 PP-loop family ParA PF10609.9 AHX11763.1 - 5.8e-76 255.2 0.1 7.1e-76 254.9 0.1 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 AHX11763.1 - 7.1e-15 55.2 0.0 9.4e-15 54.8 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 AHX11763.1 - 5.5e-10 39.4 0.2 2e-08 34.4 0.2 2.2 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 AHX11763.1 - 6.6e-07 28.9 0.0 9.4e-07 28.4 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 AHX11763.1 - 4.3e-06 26.1 1.4 0.0007 18.9 0.1 2.9 2 1 1 3 3 3 1 Anion-transporting ATPase AAA_26 PF13500.6 AHX11763.1 - 0.00011 22.1 0.9 0.0087 15.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain Fer4_NifH PF00142.18 AHX11763.1 - 0.00034 20.1 0.0 0.017 14.6 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family VirC1 PF07015.11 AHX11763.1 - 0.0056 16.0 0.0 0.016 14.5 0.0 1.7 2 0 0 2 2 2 1 VirC1 protein AAA_25 PF13481.6 AHX11763.1 - 0.019 14.5 0.1 0.036 13.6 0.1 1.4 1 0 0 1 1 1 0 AAA domain OmpA PF00691.20 AHX11764.1 - 2.8e-13 50.0 0.1 3.4e-12 46.6 0.1 2.0 1 1 0 1 1 1 1 OmpA family TPR_16 PF13432.6 AHX11765.1 - 1.2e-05 25.9 0.1 3.6e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 AHX11765.1 - 0.00024 21.5 1.9 0.75 10.6 0.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat ANAPC3 PF12895.7 AHX11765.1 - 0.002 18.3 3.8 1.5 9.1 1.4 2.9 1 1 2 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 AHX11765.1 - 0.0037 17.7 0.5 4.1 8.0 0.0 3.3 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 AHX11765.1 - 0.0052 16.9 3.2 0.027 14.7 1.2 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat YfiO PF13525.6 AHX11765.1 - 0.014 15.1 0.1 0.031 14.0 0.1 1.5 1 1 1 2 2 2 0 Outer membrane lipoprotein TPR_2 PF07719.17 AHX11765.1 - 0.026 14.6 3.1 0.45 10.8 0.5 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 AHX11765.1 - 0.16 12.9 0.1 5.6 8.1 0.0 2.8 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 AHX11765.1 - 0.52 10.2 3.8 0.32 10.9 0.6 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat iPGM_N PF06415.13 AHX11766.1 - 8.9e-58 195.3 0.1 1.8e-57 194.3 0.1 1.5 1 0 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Metalloenzyme PF01676.18 AHX11766.1 - 1.3e-55 188.5 0.3 1.5e-55 188.3 0.3 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 AHX11766.1 - 1.2e-09 38.3 0.2 4.5e-07 29.8 0.0 2.2 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 AHX11766.1 - 0.00068 19.8 0.1 0.0015 18.7 0.1 1.6 1 0 0 1 1 1 1 PglZ domain DegV PF02645.16 AHX11766.1 - 0.016 14.6 0.0 0.03 13.7 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 Alk_phosphatase PF00245.20 AHX11766.1 - 0.029 13.3 0.1 0.064 12.2 0.1 1.5 1 0 0 1 1 1 0 Alkaline phosphatase Methyltransf_31 PF13847.6 AHX11766.1 - 0.085 12.6 0.0 0.22 11.3 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain Hydrolase_4 PF12146.8 AHX11767.1 - 8.9e-09 35.0 0.0 3.3e-08 33.1 0.0 1.7 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Peptidase_S15 PF02129.18 AHX11767.1 - 4.4e-08 33.0 0.0 5.7e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_1 PF00561.20 AHX11767.1 - 0.00012 21.8 0.1 0.00028 20.6 0.0 1.5 1 1 1 2 2 2 1 alpha/beta hydrolase fold DLH PF01738.18 AHX11767.1 - 0.015 14.9 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Dienelactone hydrolase family Abhydrolase_6 PF12697.7 AHX11767.1 - 0.061 13.9 0.0 0.067 13.8 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 AHX11767.1 - 0.075 12.5 0.0 0.62 9.5 0.0 2.1 1 1 1 2 2 2 0 Prolyl oligopeptidase family Abhydrolase_5 PF12695.7 AHX11767.1 - 0.1 12.4 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Esterase PF00756.20 AHX11767.1 - 0.13 11.9 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Putative esterase tRNA-synt_1g PF09334.11 AHX11768.1 - 4.4e-107 358.2 0.9 6.5e-65 219.4 0.0 2.2 1 1 1 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 AHX11768.1 - 1.8e-23 82.7 3.3 1.9e-11 43.0 0.5 3.9 1 1 2 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 AHX11768.1 - 1.6e-11 44.1 0.0 4.1e-06 26.4 0.1 2.6 2 1 1 3 3 3 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 AHX11768.1 - 0.00038 20.4 1.1 0.00075 19.5 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 AHX11768.1 - 0.054 12.4 0.0 4.3 6.1 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (K) Thioredoxin PF00085.20 AHX11769.1 - 6.2e-24 84.0 0.0 6.7e-24 83.9 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 AHX11769.1 - 2.9e-09 37.3 0.0 4.2e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_9 PF14595.6 AHX11769.1 - 4.1e-07 29.8 0.0 4.5e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 AHX11769.1 - 4.9e-07 30.0 0.0 1e-05 25.7 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin-like TraF PF13728.6 AHX11769.1 - 7.3e-07 29.2 0.0 8.4e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein AhpC-TSA PF00578.21 AHX11769.1 - 5.6e-05 23.0 0.0 5.6e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family DUF3088 PF11287.8 AHX11769.1 - 0.0009 19.0 0.0 0.0011 18.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3088) Glutaredoxin PF00462.24 AHX11769.1 - 0.015 15.5 0.0 0.019 15.2 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin Redoxin PF08534.10 AHX11769.1 - 0.025 14.3 0.1 0.049 13.4 0.0 1.5 1 1 1 2 2 2 0 Redoxin HyaE PF07449.11 AHX11769.1 - 0.032 14.2 0.0 0.046 13.7 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Thioredoxin_7 PF13899.6 AHX11769.1 - 0.038 14.2 0.1 0.084 13.1 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like Thioredoxin_3 PF13192.6 AHX11769.1 - 0.1 12.7 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin domain Ribosomal_L19 PF01245.20 AHX11770.1 - 4.7e-33 113.4 0.2 5.5e-33 113.2 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L19 tRNA_m1G_MT PF01746.21 AHX11771.1 - 5.4e-44 150.2 0.0 5.9e-44 150.1 0.0 1.0 1 0 0 1 1 1 1 tRNA (Guanine-1)-methyltransferase Ribosomal_L27 PF01016.19 AHX11772.1 - 9.8e-38 128.0 2.2 1.1e-37 127.9 2.2 1.0 1 0 0 1 1 1 1 Ribosomal L27 protein Ribosomal_L21p PF00829.21 AHX11773.1 - 5.1e-26 90.9 7.7 6e-26 90.7 7.7 1.1 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein Toprim_4 PF13662.6 AHX11775.1 - 7.6e-21 74.4 0.1 1.3e-20 73.7 0.1 1.4 1 0 0 1 1 1 1 Toprim domain RecR PF02132.15 AHX11775.1 - 1.1e-11 44.1 1.3 2.2e-11 43.1 1.3 1.6 1 0 0 1 1 1 1 RecR protein Toprim PF01751.22 AHX11775.1 - 2.2e-05 24.6 0.1 3.9e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 Toprim domain HHH_5 PF14520.6 AHX11775.1 - 0.036 14.7 0.2 0.17 12.5 0.1 2.1 2 1 0 2 2 2 0 Helix-hairpin-helix domain HHH PF00633.23 AHX11775.1 - 0.045 13.6 0.0 0.14 12.1 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix motif Thioredoxin_4 PF13462.6 AHX11776.1 - 6.9e-31 107.6 0.0 8.1e-31 107.4 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 AHX11776.1 - 3.9e-08 33.3 0.0 0.006 16.4 0.0 2.1 2 0 0 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_12 PF18400.1 AHX11776.1 - 0.011 15.6 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_3 PF13192.6 AHX11776.1 - 0.14 12.2 0.0 5 7.2 0.0 2.3 2 0 0 2 2 2 0 Thioredoxin domain DSBA PF01323.20 AHX11778.1 - 2.6e-14 53.4 0.0 5.3e-12 45.9 0.0 2.3 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 AHX11778.1 - 7.9e-10 39.1 0.2 5.2e-09 36.5 0.0 2.2 2 1 0 2 2 2 1 Thioredoxin Thioredoxin_2 PF13098.6 AHX11778.1 - 0.0016 18.8 0.3 0.21 12.1 0.0 2.6 2 1 1 3 3 3 1 Thioredoxin-like domain CaMKII_AD PF08332.10 AHX11778.1 - 0.039 14.1 0.1 0.15 12.2 0.0 1.8 2 0 0 2 2 2 0 Calcium/calmodulin dependent protein kinase II association domain DUF3153 PF11353.8 AHX11778.1 - 0.092 12.3 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3153) ScsC_N PF18312.1 AHX11778.1 - 3.4 7.5 12.2 3.3 7.6 8.7 2.7 2 1 0 2 2 2 0 Copper resistance protein ScsC N-terminal domain rhaM PF05336.13 AHX11779.1 - 0.078 13.1 0.0 0.089 12.9 0.0 1.1 1 0 0 1 1 1 0 L-rhamnose mutarotase HypF_C PF17788.1 AHX11779.1 - 0.18 12.5 0.0 0.27 11.9 0.0 1.4 1 0 0 1 1 1 0 HypF Kae1-like domain DUF2001 PF09393.10 AHX11780.1 - 0.012 15.6 0.6 7.7 6.5 0.0 3.3 2 1 1 3 3 3 0 Phage tail tube protein vATP-synt_AC39 PF01992.16 AHX11780.1 - 0.014 15.0 9.1 0.47 9.9 0.6 3.6 2 2 1 3 3 3 0 ATP synthase (C/AC39) subunit XAF1_C PF18608.1 AHX11780.1 - 0.014 14.9 0.0 13 5.4 0.0 4.2 2 1 3 5 5 5 0 XIAP-associated factor 1 C-terminal domain TM1506 PF08973.10 AHX11780.1 - 0.053 13.2 1.4 0.58 9.8 0.1 3.0 2 2 2 4 4 4 0 Domain of unknown function (DUF1893) Antimicrobial15 PF08110.12 AHX11780.1 - 4.6 7.7 12.0 1.6e+02 2.8 0.1 7.0 6 0 0 6 6 6 0 Ocellatin family SRP54_N PF02881.19 AHX11781.1 - 0.1 12.8 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, helical bundle domain YchF-GTPase_C PF06071.13 AHX11783.1 - 3e-38 129.9 1.3 7.6e-38 128.6 0.5 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 AHX11783.1 - 3.8e-11 43.1 0.0 1.1e-10 41.6 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 AHX11783.1 - 0.044 13.8 0.0 0.13 12.4 0.0 1.8 1 1 0 1 1 1 0 TGS domain PAC2 PF09754.9 AHX11783.1 - 0.14 12.2 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 PAC2 family Peptidase_M16_C PF05193.21 AHX11787.1 - 1.1e-21 77.6 0.2 1.3e-19 70.9 0.1 2.6 3 0 0 3 3 3 2 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 AHX11787.1 - 1.2e-09 38.3 0.0 2.3e-09 37.4 0.0 1.4 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16 PF00675.20 AHX11788.1 - 5.7e-21 75.0 0.1 1.1e-20 74.2 0.1 1.4 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 AHX11788.1 - 5.2e-20 72.2 0.3 1.8e-19 70.5 0.0 1.9 2 0 0 2 2 2 1 Peptidase M16 inactive domain Peptidase_A8 PF01252.18 AHX11789.1 - 3.7e-30 105.0 7.2 4.5e-30 104.7 7.2 1.2 1 0 0 1 1 1 1 Signal peptidase (SPase) II TraL PF07178.11 AHX11789.1 - 0.071 13.6 0.6 0.18 12.3 0.3 1.8 1 1 0 1 1 1 0 TraL protein Peptidase_M32 PF02074.15 AHX11790.1 - 1.9e-49 168.8 0.6 2.8e-26 92.3 0.2 2.6 1 1 0 2 2 2 2 Carboxypeptidase Taq (M32) metallopeptidase NdhM PF10664.9 AHX11790.1 - 0.25 11.6 1.4 2 8.7 0.2 2.8 4 0 0 4 4 4 0 Cyanobacterial and plastid NDH-1 subunit M Ribonucleas_3_3 PF14622.6 AHX11793.1 - 2.2e-29 102.2 0.0 3.4e-29 101.6 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.26 AHX11793.1 - 1.4e-20 73.9 0.0 4e-20 72.4 0.0 1.8 2 0 0 2 2 2 1 Ribonuclease III domain dsrm PF00035.26 AHX11793.1 - 2.4e-14 53.8 0.0 3.8e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Double-stranded RNA binding motif DND1_DSRM PF14709.7 AHX11793.1 - 0.01 16.0 0.0 0.025 14.8 0.0 1.7 1 1 0 1 1 1 0 double strand RNA binding domain from DEAD END PROTEIN 1 RsfS PF02410.15 AHX11794.1 - 3.4e-19 69.1 0.1 3.8e-19 68.9 0.1 1.0 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation FtsL PF04999.13 AHX11795.1 - 0.0071 16.3 0.0 0.0083 16.1 0.0 1.1 1 0 0 1 1 1 1 Cell division protein FtsL Methyltransf_5 PF01795.19 AHX11796.1 - 2.6e-93 312.9 0.2 4.8e-93 312.0 0.2 1.4 1 1 0 1 1 1 1 MraW methylase family Methyltransf_4 PF02390.17 AHX11798.1 - 4.1e-38 130.6 0.0 5.2e-38 130.2 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase DUF938 PF06080.12 AHX11798.1 - 0.15 11.8 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) YfiO PF13525.6 AHX11799.1 - 4.3e-36 124.6 0.7 5.3e-36 124.3 0.7 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein TPR_18 PF13512.6 AHX11799.1 - 8.9e-15 55.1 0.6 3.6e-12 46.6 0.2 2.7 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 AHX11799.1 - 9.7e-09 35.3 0.3 0.073 13.7 0.0 4.6 4 1 0 4 4 4 2 Tetratricopeptide repeat MPS2 PF17060.5 AHX11799.1 - 0.072 12.3 0.2 0.094 12.0 0.2 1.2 1 0 0 1 1 1 0 Monopolar spindle protein 2 TPR_16 PF13432.6 AHX11799.1 - 0.086 13.5 0.1 5.6 7.7 0.1 3.0 2 1 2 4 4 4 0 Tetratricopeptide repeat LPAM_1 PF08139.12 AHX11799.1 - 0.31 11.6 2.4 0.57 10.8 2.4 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site GARS_A PF01071.19 AHX11800.1 - 7.6e-62 208.5 0.0 1e-61 208.1 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 AHX11800.1 - 1.5e-24 86.5 0.0 2.8e-24 85.7 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 AHX11800.1 - 1.8e-14 53.8 0.0 6.5e-14 52.0 0.0 1.9 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain RimK PF08443.11 AHX11800.1 - 9.7e-07 28.6 0.0 2e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp PF02222.22 AHX11800.1 - 1.6e-06 27.8 0.0 6e-06 25.9 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_3 PF02655.14 AHX11800.1 - 1.9e-05 24.8 0.0 3.2e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 AHX11800.1 - 0.00038 20.0 0.0 0.00064 19.3 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_2 PF08442.10 AHX11800.1 - 0.00043 19.9 0.0 0.00068 19.3 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 AHX11800.1 - 0.0043 16.6 0.0 0.0069 15.9 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.6 AHX11800.1 - 0.018 14.7 0.0 0.032 13.8 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain GFO_IDH_MocA PF01408.22 AHX11800.1 - 0.079 13.8 0.0 0.32 11.8 0.0 1.9 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold ExbD PF02472.16 AHX11802.1 - 3.9e-28 98.2 0.4 4.3e-28 98.1 0.4 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR DUF2487 PF10673.9 AHX11802.1 - 0.13 12.3 0.0 0.17 11.9 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2487) DUF2149 PF09919.9 AHX11802.1 - 2.1 8.7 5.7 3.8 7.8 5.7 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) MotA_ExbB PF01618.16 AHX11803.1 - 4.4e-34 117.0 2.6 4.9e-34 116.8 1.8 1.5 1 1 1 2 2 2 1 MotA/TolQ/ExbB proton channel family Mito_carr PF00153.27 AHX11804.1 - 5e-09 36.0 9.5 3.2e-06 27.0 0.3 3.7 3 1 1 4 4 4 2 Mitochondrial carrier protein ArfA PF03889.13 AHX11804.1 - 0.33 10.5 0.6 2.9 7.4 0.2 2.2 2 0 0 2 2 2 0 Alternative ribosome-rescue factor A Mito_carr PF00153.27 AHX11805.1 - 0.0024 17.8 2.6 0.13 12.2 0.0 3.0 3 1 1 4 4 4 2 Mitochondrial carrier protein Ribosomal_L36 PF00444.18 AHX11806.1 - 4.7e-10 39.5 4.4 4.7e-10 39.5 4.4 1.4 2 0 0 2 2 2 1 Ribosomal protein L36 DHDPS PF00701.22 AHX11807.1 - 1.7e-67 227.2 0.1 1.9e-67 227.0 0.1 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family Ni_hydr_CYTB PF01292.20 AHX11808.1 - 8.4e-24 84.2 11.0 1.2e-23 83.7 11.0 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 AHX11808.1 - 8.1e-05 23.1 2.7 8.1e-05 23.1 2.7 2.5 2 1 0 2 2 2 1 Domain of unknown function (DUF4405) Aminotran_4 PF01063.19 AHX11809.1 - 1.3e-36 126.5 0.0 1.8e-36 126.1 0.0 1.2 1 0 0 1 1 1 1 Amino-transferase class IV HAD_2 PF13419.6 AHX11810.1 - 1.3e-21 77.4 0.0 1.5e-21 77.3 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AHX11810.1 - 1.4e-07 32.0 0.0 1.8e-07 31.6 0.0 1.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 AHX11810.1 - 1.4e-06 28.9 0.0 1.7e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 AHX11810.1 - 0.17 12.0 0.0 0.41 10.8 0.0 1.6 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase UDG PF03167.19 AHX11811.1 - 4.6e-46 156.6 0.0 6.2e-46 156.2 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily MlaA PF04333.13 AHX11812.1 - 1.4e-47 162.0 0.0 1.9e-47 161.5 0.0 1.2 1 0 0 1 1 1 1 MlaA lipoprotein MlaC PF05494.12 AHX11813.1 - 1.6e-18 67.0 0.4 2e-18 66.7 0.4 1.0 1 0 0 1 1 1 1 MlaC protein Tox-MPTase4 PF15640.6 AHX11813.1 - 0.0018 18.2 0.2 0.0018 18.2 0.2 1.7 2 1 0 2 2 2 1 Metallopeptidase toxin 4 DUF2610 PF11020.8 AHX11814.1 - 6.9e-11 41.9 0.2 8.1e-11 41.6 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF2610) HlyD_3 PF13437.6 AHX11815.1 - 4.7e-12 46.6 0.7 7.9e-08 33.0 0.0 3.8 4 1 0 4 4 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AHX11815.1 - 1.1e-09 38.0 1.1 4.6e-08 32.8 0.2 2.7 2 0 0 2 2 2 1 Biotin-lipoyl like HlyD_D23 PF16576.5 AHX11815.1 - 3.6e-06 26.4 1.7 0.019 14.2 0.1 2.5 2 1 0 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl PF00364.22 AHX11815.1 - 4.6e-05 23.2 0.2 0.0034 17.2 0.1 2.6 2 0 0 2 2 2 1 Biotin-requiring enzyme HlyD PF00529.20 AHX11815.1 - 0.00013 21.8 0.0 0.00033 20.5 0.0 1.7 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS RnfC_N PF13375.6 AHX11815.1 - 0.0057 16.6 0.5 5.1 7.1 0.0 2.5 2 0 0 2 2 2 2 RnfC Barrel sandwich hybrid domain ApoO PF09769.9 AHX11815.1 - 0.049 13.6 2.5 0.36 10.8 0.2 2.9 3 0 0 3 3 3 0 Apolipoprotein O Peptidase_M23 PF01551.22 AHX11815.1 - 0.097 12.9 0.3 4.6 7.5 0.0 2.6 2 0 0 2 2 2 0 Peptidase family M23 AATF-Che1 PF13339.6 AHX11815.1 - 0.4 11.4 7.3 1.1 9.9 6.4 2.1 1 1 0 1 1 1 0 Apoptosis antagonizing transcription factor Fib_alpha PF08702.10 AHX11815.1 - 1.3 9.2 9.5 1.9 8.7 6.7 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Cob_adeno_trans PF01923.18 AHX11815.1 - 6.2 6.9 8.6 1.1 9.4 1.1 2.7 1 1 2 3 3 3 0 Cobalamin adenosyltransferase Fe-ADH_2 PF13685.6 AHX11816.1 - 9.6e-46 156.5 0.0 1.3e-45 156.1 0.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 AHX11816.1 - 4.6e-10 38.9 0.0 6.2e-10 38.4 0.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 AHX11816.1 - 3.1e-08 33.1 0.5 0.00087 18.5 0.1 2.8 2 1 0 2 2 2 2 3-dehydroquinate synthase Sdh5 PF03937.16 AHX11817.1 - 1.9e-20 72.6 0.0 2.1e-20 72.4 0.0 1.1 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase CTP_transf_1 PF01148.20 AHX11819.1 - 3.7e-44 151.5 15.3 1e-40 140.2 9.8 2.0 1 1 1 2 2 2 2 Cytidylyltransferase family CarS-like PF01864.17 AHX11819.1 - 0.0082 16.1 1.3 0.0082 16.1 1.3 2.1 1 1 1 2 2 2 1 CDP-archaeol synthase Prenyltransf PF01255.19 AHX11820.1 - 6.2e-75 251.6 0.0 7e-75 251.4 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Ferrochelatase PF00762.19 AHX11820.1 - 0.061 12.4 0.0 0.097 11.7 0.0 1.3 1 0 0 1 1 1 0 Ferrochelatase RRF PF01765.19 AHX11821.1 - 4.2e-48 163.4 1.0 4.8e-48 163.2 1.0 1.0 1 0 0 1 1 1 1 Ribosome recycling factor EF-hand_7 PF13499.6 AHX11821.1 - 0.079 13.4 1.5 0.19 12.2 0.1 2.1 2 0 0 2 2 2 0 EF-hand domain pair AA_kinase PF00696.28 AHX11822.1 - 4.9e-23 82.0 0.9 5.8e-23 81.7 0.9 1.1 1 0 0 1 1 1 1 Amino acid kinase family EF_TS PF00889.19 AHX11823.1 - 1.3e-58 198.0 0.4 1.7e-58 197.7 0.4 1.1 1 0 0 1 1 1 1 Elongation factor TS Orbi_VP7 PF00897.17 AHX11823.1 - 0.024 13.6 0.0 0.032 13.2 0.0 1.1 1 0 0 1 1 1 0 Orbivirus inner capsid protein VP7 RBD-FIP PF09457.10 AHX11823.1 - 0.074 13.0 0.0 5.1 7.1 0.0 2.8 3 0 0 3 3 3 0 FIP domain Ribosomal_S2 PF00318.20 AHX11824.1 - 1.3e-84 282.8 0.0 1.6e-84 282.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S2 Ubie_methyltran PF01209.18 AHX11825.1 - 2.6e-75 252.7 0.1 2.9e-75 252.6 0.1 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 AHX11825.1 - 2.4e-19 69.8 0.0 8.5e-19 68.1 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 AHX11825.1 - 1.1e-17 64.5 0.0 9.9e-17 61.4 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 AHX11825.1 - 6.2e-15 55.3 0.0 7.8e-15 55.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AHX11825.1 - 6.4e-10 39.7 0.0 1e-09 39.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AHX11825.1 - 6.1e-07 29.4 0.0 8e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AHX11825.1 - 2.2e-06 27.3 0.0 3.4e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_5 PF01795.19 AHX11825.1 - 3.3e-05 23.5 0.0 0.025 14.1 0.0 2.9 1 1 1 3 3 3 1 MraW methylase family Methyltransf_8 PF05148.15 AHX11825.1 - 0.00057 19.8 0.1 0.0013 18.7 0.0 1.7 2 0 0 2 2 2 1 Hypothetical methyltransferase Met_10 PF02475.16 AHX11825.1 - 0.0026 17.5 0.0 0.0054 16.5 0.0 1.5 2 0 0 2 2 2 1 Met-10+ like-protein Methyltransf_18 PF12847.7 AHX11825.1 - 0.026 14.4 0.0 0.042 13.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Gag_p6 PF08705.11 AHX11826.1 - 0.0014 18.8 35.2 0.028 14.7 0.5 6.0 5 3 0 5 5 5 3 Gag protein p6 CHB_HEX_C PF03174.13 AHX11826.1 - 0.17 11.9 0.3 1.3e+02 2.6 0.0 3.3 3 0 0 3 3 3 0 Chitobiase/beta-hexosaminidase C-terminal domain 2-oxoacid_dh PF00198.23 AHX11827.1 - 5.2e-84 281.3 0.6 7.1e-84 280.9 0.6 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 AHX11827.1 - 2.7e-15 55.9 2.1 7.4e-15 54.6 1.4 2.1 2 0 0 2 2 2 1 Biotin-requiring enzyme E3_binding PF02817.17 AHX11827.1 - 8.6e-13 48.4 0.1 1.8e-12 47.4 0.1 1.6 1 0 0 1 1 1 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 AHX11827.1 - 0.00038 20.2 0.0 0.0011 18.7 0.0 1.8 1 0 0 1 1 1 1 Biotin-lipoyl like Phos_pyr_kin PF08543.12 AHX11828.1 - 2e-70 237.0 0.1 2.2e-70 236.9 0.1 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 AHX11828.1 - 3.2e-06 26.7 0.0 4.3e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HK PF02110.15 AHX11828.1 - 0.007 15.8 1.5 1.2 8.5 0.0 2.5 2 1 1 3 3 3 2 Hydroxyethylthiazole kinase family RuvC PF02075.17 AHX11829.1 - 2.5e-38 131.3 0.0 2.8e-38 131.1 0.0 1.0 1 0 0 1 1 1 1 Crossover junction endodeoxyribonuclease RuvC DUF3882 PF07066.11 AHX11829.1 - 0.057 13.5 0.0 0.089 12.9 0.0 1.3 1 1 0 1 1 1 0 Lactococcus phage M3 protein Ldh_1_N PF00056.23 AHX11830.1 - 5.1e-40 136.8 0.5 8.2e-40 136.2 0.5 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 AHX11830.1 - 1.2e-26 93.6 0.1 1.8e-26 93.1 0.1 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain UDPG_MGDP_dh_N PF03721.14 AHX11830.1 - 0.00037 20.1 0.5 0.0016 18.1 0.5 1.9 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 AHX11830.1 - 0.0015 18.4 1.4 0.014 15.3 0.2 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyco_hydro_4 PF02056.16 AHX11830.1 - 0.0047 16.5 0.2 0.026 14.1 0.0 2.1 2 0 0 2 2 2 1 Family 4 glycosyl hydrolase F420_oxidored PF03807.17 AHX11830.1 - 0.0067 17.0 3.0 0.02 15.5 0.9 2.5 1 1 1 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent DUF357 PF04010.13 AHX11830.1 - 0.11 12.6 0.1 0.26 11.4 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF357) ThiF PF00899.21 AHX11830.1 - 0.25 10.7 3.8 0.2 11.0 1.0 2.1 3 0 0 3 3 3 0 ThiF family dUTPase PF00692.19 AHX11831.1 - 8.4e-34 116.0 0.0 9.7e-34 115.8 0.0 1.0 1 0 0 1 1 1 1 dUTPase DNA_topoisoIV PF00521.20 AHX11833.1 - 5.9e-145 483.4 0.3 5.9e-145 483.4 0.3 1.4 2 0 0 2 2 2 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 AHX11833.1 - 4.2e-60 199.0 13.2 7e-12 44.6 0.1 6.5 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller Aldose_epim PF01263.20 AHX11833.1 - 0.062 12.6 0.0 0.15 11.4 0.0 1.5 1 0 0 1 1 1 0 Aldose 1-epimerase MMR_HSR1 PF01926.23 AHX11834.1 - 4.1e-24 84.9 1.3 2.1e-23 82.6 0.3 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase KH_2 PF07650.17 AHX11834.1 - 6.4e-17 61.2 1.0 6.4e-17 61.2 1.0 1.9 2 0 0 2 2 2 1 KH domain FeoB_N PF02421.18 AHX11834.1 - 9.6e-13 47.9 0.2 1.7e-12 47.1 0.2 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B PduV-EutP PF10662.9 AHX11834.1 - 2.9e-11 43.3 0.3 9.4e-11 41.6 0.3 1.8 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 AHX11834.1 - 1.2e-09 38.3 4.1 1.7e-06 28.1 0.2 2.5 3 0 0 3 3 3 2 RsgA GTPase AIG1 PF04548.16 AHX11834.1 - 2.1e-08 33.7 1.0 3.3e-08 33.1 0.1 1.6 2 0 0 2 2 2 1 AIG1 family Dynamin_N PF00350.23 AHX11834.1 - 3.4e-07 30.5 4.7 0.00077 19.6 1.2 3.1 2 1 1 3 3 3 2 Dynamin family GTP_EFTU PF00009.27 AHX11834.1 - 3.6e-07 29.9 0.4 5.9e-05 22.7 0.3 2.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 AHX11834.1 - 3.6e-05 23.7 0.3 3.6e-05 23.7 0.3 2.3 3 0 0 3 3 3 1 C-terminal region of MMR_HSR1 domain cobW PF02492.19 AHX11834.1 - 6.2e-05 22.7 1.9 0.00093 18.8 0.0 2.8 2 1 1 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 AHX11834.1 - 0.00047 20.4 1.1 0.0027 17.9 1.1 2.2 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 AHX11834.1 - 0.00075 19.1 0.6 0.00075 19.1 0.6 2.2 2 1 0 2 2 2 1 Ras family ABC_tran PF00005.27 AHX11834.1 - 0.011 16.2 1.3 0.018 15.6 0.3 1.8 2 1 0 2 2 2 0 ABC transporter KH_1 PF00013.29 AHX11834.1 - 0.017 14.9 0.4 0.041 13.7 0.4 1.7 1 0 0 1 1 1 0 KH domain DNApol_Exo PF18136.1 AHX11834.1 - 0.025 13.7 0.3 0.052 12.7 0.0 1.6 2 0 0 2 2 2 0 DNA mitochondrial polymerase exonuclease domain AAA_29 PF13555.6 AHX11834.1 - 0.045 13.5 0.0 0.1 12.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain TniB PF05621.11 AHX11834.1 - 0.059 12.8 0.6 1.6 8.1 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein NB-ARC PF00931.22 AHX11834.1 - 0.076 12.2 0.2 0.076 12.2 0.2 1.9 2 1 0 2 2 2 0 NB-ARC domain Acyl_transf_1 PF00698.21 AHX11835.1 - 8.7e-38 130.6 0.2 1e-37 130.3 0.2 1.0 1 0 0 1 1 1 1 Acyl transferase domain SAT PF16073.5 AHX11835.1 - 0.0041 16.9 1.5 0.46 10.2 0.0 2.3 1 1 1 2 2 2 2 Starter unit:ACP transacylase in aflatoxin biosynthesis DUF2974 PF11187.8 AHX11835.1 - 0.078 12.5 0.0 0.15 11.6 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2974) Glyco_hydro_97 PF10566.9 AHX11835.1 - 0.23 10.7 0.0 0.33 10.2 0.0 1.2 1 0 0 1 1 1 0 Glycoside hydrolase 97 zf-CHC2 PF01807.20 AHX11836.1 - 1.1e-31 108.5 0.0 3.3e-31 107.0 0.0 1.9 1 0 0 1 1 1 1 CHC2 zinc finger Toprim_N PF08275.11 AHX11836.1 - 8.6e-31 106.7 0.0 2.2e-30 105.3 0.0 1.7 1 0 0 1 1 1 1 DNA primase catalytic core, N-terminal domain Toprim_2 PF13155.6 AHX11836.1 - 1.4e-17 63.9 0.0 6.5e-17 61.7 0.0 2.2 2 0 0 2 2 2 1 Toprim-like Toprim_4 PF13662.6 AHX11836.1 - 2.3e-16 60.0 0.0 5e-16 58.9 0.0 1.6 1 0 0 1 1 1 1 Toprim domain Toprim PF01751.22 AHX11836.1 - 2.4e-06 27.7 0.0 8.7e-06 25.9 0.0 2.0 1 0 0 1 1 1 1 Toprim domain Toprim_3 PF13362.6 AHX11836.1 - 0.0092 16.3 0.0 0.018 15.4 0.0 1.5 1 0 0 1 1 1 1 Toprim domain ACPS PF01648.20 AHX11837.1 - 1.7e-18 66.8 0.0 1.9e-18 66.6 0.0 1.0 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily CbiD PF01888.17 AHX11838.1 - 0.1 11.9 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 CbiD EPSP_synthase PF00275.20 AHX11839.1 - 1.2e-82 277.8 0.2 1.4e-82 277.7 0.2 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) dUTPase PF00692.19 AHX11840.1 - 6.6e-05 22.6 0.0 0.00012 21.7 0.0 1.4 1 0 0 1 1 1 1 dUTPase ThiC_Rad_SAM PF01964.18 AHX11841.1 - 7e-69 232.6 0.0 9.7e-69 232.1 0.0 1.1 1 0 0 1 1 1 1 Radical SAM ThiC family ThiC-associated PF13667.6 AHX11841.1 - 1.3e-11 44.1 0.0 4e-11 42.6 0.0 1.9 1 1 0 1 1 1 1 ThiC-associated domain Pox_A9 PF04835.12 AHX11841.1 - 0.16 12.1 0.1 0.28 11.4 0.1 1.3 1 0 0 1 1 1 0 A9 protein conserved region ThiC_Rad_SAM PF01964.18 AHX11842.1 - 5.7e-112 374.5 0.0 6.5e-112 374.4 0.0 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family ATP-grasp PF02222.22 AHX11843.1 - 2.2e-42 144.5 0.0 3.2e-42 144.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 AHX11843.1 - 1.2e-12 47.3 0.0 2.4e-12 46.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 AHX11843.1 - 2.4e-05 24.0 0.0 0.00013 21.6 0.0 2.1 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus adh_short PF00106.25 AHX11844.1 - 1.8e-18 66.7 0.0 2.2e-18 66.4 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AHX11844.1 - 6.7e-13 48.7 0.0 8.1e-13 48.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AHX11844.1 - 0.00084 19.3 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AHX11844.1 - 0.011 15.2 0.0 0.021 14.3 0.0 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AHX11844.1 - 0.033 13.6 0.0 0.05 13.0 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Neorickettsia_helminthoeca_str._Oregon-ASM63298v1/GCA_000632985.1_ASM63298v1_protein.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Neorickettsia_helminthoeca_str._Oregon-ASM63298v1/GCA_000632985.1_ASM63298v1_protein.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Neorickettsia_helminthoeca_str._Oregon-ASM63298v1/GCA_000632985.1_ASM63298v1_protein.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Neorickettsia_helminthoeca_str._Oregon-ASM63298v1/GCA_000632985.1_ASM63298v1_protein.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Sun Mar 24 03:12:44 2019 # [ok]