# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LamB PF02264.15 CTQ26094.1 - 3.9e-35 122.5 3.7 4.3e-35 122.3 3.7 1.0 1 0 0 1 1 1 1 LamB porin OMP_b-brl PF13505.6 CTQ26094.1 - 0.0017 18.5 3.3 0.0017 18.5 3.3 1.9 1 1 1 2 2 2 1 Outer membrane protein beta-barrel domain Inhibitor_I36 PF03995.13 CTQ26094.1 - 0.069 13.1 0.4 1.2 9.1 0.1 2.4 2 1 0 2 2 2 0 Peptidase inhibitor family I36 BPD_transp_1 PF00528.22 CTQ26095.1 - 1.3e-13 51.1 16.0 1.3e-13 51.1 16.0 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ26096.1 - 2.2e-15 56.9 23.7 2.2e-15 56.9 23.7 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 CTQ26097.1 - 4.2e-35 121.2 0.0 6.7e-35 120.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 CTQ26097.1 - 4.9e-13 49.1 0.1 1.6e-12 47.4 0.0 2.0 2 0 0 2 2 1 1 TOBE domain AAA_21 PF13304.6 CTQ26097.1 - 7.5e-11 42.4 0.1 0.00028 20.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ26097.1 - 2e-05 25.0 0.1 5.1e-05 23.7 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 CTQ26097.1 - 3.1e-05 23.5 0.0 0.17 11.3 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 CTQ26097.1 - 0.00032 20.5 0.2 0.0011 18.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CTQ26097.1 - 0.00045 20.5 0.2 0.0024 18.2 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ26097.1 - 0.00049 19.8 0.0 0.001 18.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain CbiA PF01656.23 CTQ26097.1 - 0.0019 18.2 0.0 0.0042 17.1 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA PF00004.29 CTQ26097.1 - 0.0058 17.1 0.2 0.039 14.4 0.2 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 CTQ26097.1 - 0.0071 16.5 0.1 0.016 15.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 CTQ26097.1 - 0.016 14.1 0.0 1.4 7.6 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_23 PF13476.6 CTQ26097.1 - 0.016 15.7 0.1 0.026 15.0 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ26097.1 - 0.024 14.2 1.2 0.088 12.4 0.1 2.4 3 0 0 3 3 3 0 AAA domain T2SSE PF00437.20 CTQ26097.1 - 0.026 13.6 0.0 0.039 13.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_15 PF13175.6 CTQ26097.1 - 0.043 13.5 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.6 CTQ26097.1 - 0.045 14.1 0.2 0.12 12.7 0.2 1.7 1 0 0 1 1 1 0 AAA domain DUF3987 PF13148.6 CTQ26097.1 - 0.047 12.7 0.1 0.074 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) AAA_24 PF13479.6 CTQ26097.1 - 0.048 13.4 0.4 0.11 12.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 CTQ26097.1 - 0.053 12.4 0.0 0.096 11.6 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain RsgA_GTPase PF03193.16 CTQ26097.1 - 0.054 13.4 0.1 0.093 12.6 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase SRP54 PF00448.22 CTQ26097.1 - 0.06 13.0 0.0 0.14 11.7 0.0 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain NACHT PF05729.12 CTQ26097.1 - 0.07 13.0 0.1 0.21 11.5 0.1 1.8 2 0 0 2 2 1 0 NACHT domain Dynamin_N PF00350.23 CTQ26097.1 - 0.094 12.8 0.1 7.9 6.5 0.1 2.1 2 0 0 2 2 2 0 Dynamin family AAA_5 PF07728.14 CTQ26097.1 - 0.11 12.5 0.1 0.3 11.1 0.1 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 CTQ26097.1 - 0.13 12.2 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain NB-ARC PF00931.22 CTQ26097.1 - 0.18 10.9 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_28 PF13521.6 CTQ26097.1 - 0.21 11.8 0.5 0.42 10.8 0.1 1.7 2 0 0 2 2 2 0 AAA domain SBP_bac_1 PF01547.25 CTQ26098.1 - 4.6e-25 89.2 4.7 4.6e-25 89.2 4.7 1.6 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ26098.1 - 9.2e-25 87.5 1.6 1.5e-24 86.8 1.6 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 CTQ26098.1 - 2.1e-19 70.5 2.1 2.9e-19 70.0 2.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 CTQ26098.1 - 3.5e-18 66.2 1.4 4.5e-18 65.8 1.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein UTRA PF07702.13 CTQ26099.1 - 8.4e-35 119.7 0.3 1.3e-34 119.1 0.1 1.4 2 0 0 2 2 2 1 UTRA domain GntR PF00392.21 CTQ26099.1 - 2.9e-20 71.7 0.0 4.9e-20 70.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 CTQ26099.1 - 0.0083 15.9 0.0 0.019 14.7 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ26099.1 - 0.017 15.1 0.0 0.032 14.2 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_27 PF13463.6 CTQ26099.1 - 0.078 13.5 0.0 0.23 12.0 0.0 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_41 PF14502.6 CTQ26099.1 - 0.08 12.6 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain FLYWCH PF04500.16 CTQ26100.1 - 0.35 11.0 2.3 0.76 9.9 2.2 1.7 1 1 0 1 1 1 0 FLYWCH zinc finger domain Aminotran_5 PF00266.19 CTQ26101.1 - 1.2e-25 90.2 0.0 1.6e-25 89.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 CTQ26101.1 - 4.2e-06 26.2 0.0 2.8e-05 23.4 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class I and II Hydrolase PF00702.26 CTQ26102.1 - 8.6e-05 22.9 0.0 0.00014 22.3 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CTQ26102.1 - 0.0032 17.6 0.0 0.0059 16.7 0.0 1.4 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase AP4E_app_platf PF14807.6 CTQ26102.1 - 0.18 12.2 0.0 0.3 11.5 0.0 1.4 1 0 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform MFS_1 PF07690.16 CTQ26103.1 - 2.1e-30 105.8 61.8 2.2e-29 102.5 52.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF679 PF05078.12 CTQ26103.1 - 0.0038 17.2 1.6 0.012 15.6 1.6 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF679) RelE PF06296.12 CTQ26104.1 - 1.4e-40 138.2 0.8 1.5e-40 138.0 0.8 1.0 1 0 0 1 1 1 1 RelE toxin of RelE / RelB toxin-antitoxin system HTH_3 PF01381.22 CTQ26105.1 - 2e-08 34.2 0.0 2.7e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ26105.1 - 6.8e-06 26.3 0.0 9.1e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 CTQ26105.1 - 7.6e-05 22.8 0.0 9.4e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_19 PF12844.7 CTQ26105.1 - 0.0022 18.0 0.0 0.0031 17.5 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4447 PF14590.6 CTQ26105.1 - 0.013 15.3 0.0 0.016 15.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4447) HTH_23 PF13384.6 CTQ26105.1 - 0.037 13.8 0.0 0.069 13.0 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain YdaS_antitoxin PF15943.5 CTQ26105.1 - 0.13 12.1 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DUF1198 PF06711.11 CTQ26106.1 - 2.5e-69 231.9 0.1 2.8e-69 231.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1198) FxsA PF04186.13 CTQ26106.1 - 0.0071 16.5 0.0 0.014 15.5 0.0 1.4 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein MFS_1 PF07690.16 CTQ26107.1 - 5.8e-33 114.3 30.4 5.8e-33 114.3 30.4 1.8 2 0 0 2 2 2 1 Major Facilitator Superfamily PrgI PF12666.7 CTQ26107.1 - 1.6 9.5 19.4 1.4 9.6 1.8 4.9 4 2 1 5 5 5 0 PrgI family protein MFS_1 PF07690.16 CTQ26108.1 - 1.5e-47 162.3 41.8 1.5e-47 162.3 41.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily HisKA_3 PF07730.13 CTQ26109.1 - 4.1e-15 56.0 1.9 4.1e-15 56.0 1.9 2.6 2 0 0 2 2 2 1 Histidine kinase MASE1 PF05231.14 CTQ26109.1 - 2.8e-12 46.4 45.2 2.3e-11 43.4 45.2 2.3 1 1 0 1 1 1 1 MASE1 HATPase_c PF02518.26 CTQ26109.1 - 2.3e-06 28.1 0.0 1.4e-05 25.6 0.0 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF2232 PF09991.9 CTQ26109.1 - 0.0099 15.1 0.4 0.026 13.7 0.4 1.7 1 0 0 1 1 1 1 Predicted membrane protein (DUF2232) Response_reg PF00072.24 CTQ26110.1 - 6.7e-25 87.4 0.0 1.1e-24 86.8 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 CTQ26110.1 - 2.1e-22 78.4 0.1 3.9e-22 77.6 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 CTQ26110.1 - 2.8e-05 23.7 0.7 9.3e-05 22.0 0.1 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_Tnp_ISL3 PF13542.6 CTQ26110.1 - 4e-05 22.9 0.0 9.7e-05 21.7 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 CTQ26110.1 - 0.00023 20.9 0.0 0.00047 19.9 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 CTQ26110.1 - 0.0003 20.9 0.7 0.00053 20.1 0.0 1.9 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_24 PF13412.6 CTQ26110.1 - 0.0011 18.5 0.0 0.0025 17.3 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 CTQ26110.1 - 0.0014 18.3 0.0 0.0039 16.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 CTQ26110.1 - 0.0015 18.5 0.0 0.0049 16.9 0.0 2.0 1 1 1 2 2 2 1 Winged helix-turn helix HTH_Tnp_1 PF01527.20 CTQ26110.1 - 0.0021 18.4 0.1 0.0043 17.3 0.1 1.5 1 0 0 1 1 1 1 Transposase Terminase_5 PF06056.12 CTQ26110.1 - 0.0026 17.6 0.0 0.005 16.7 0.0 1.5 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_40 PF14493.6 CTQ26110.1 - 0.0033 17.8 0.0 0.0063 16.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 CTQ26110.1 - 0.0049 16.9 0.0 0.01 15.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Sigma70_r4 PF04545.16 CTQ26110.1 - 0.0095 15.4 0.2 0.03 13.8 0.2 1.8 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_5 PF01022.20 CTQ26110.1 - 0.011 15.6 1.1 0.02 14.8 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Sigma70_ECF PF07638.11 CTQ26110.1 - 0.02 14.8 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 ECF sigma factor HTH_20 PF12840.7 CTQ26110.1 - 0.021 14.8 0.1 0.05 13.7 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 CTQ26110.1 - 0.029 14.2 0.0 0.072 13.0 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_IclR PF09339.10 CTQ26110.1 - 0.032 14.0 0.2 0.082 12.7 0.0 1.8 2 0 0 2 2 1 0 IclR helix-turn-helix domain HTH_AsnC-type PF13404.6 CTQ26110.1 - 0.04 13.8 0.0 0.11 12.3 0.0 1.8 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_10 PF04967.12 CTQ26110.1 - 0.091 12.6 0.1 0.37 10.6 0.1 2.1 1 1 0 1 1 1 0 HTH DNA binding domain HTH_AraC PF00165.23 CTQ26110.1 - 0.14 12.3 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family Cadherin_2 PF08266.12 CTQ26110.1 - 0.15 11.9 0.1 0.26 11.1 0.1 1.4 1 0 0 1 1 1 0 Cadherin-like ACT PF01842.25 CTQ26111.1 - 5.4e-09 35.7 0.0 7.1e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 ACT domain ACT_5 PF13710.6 CTQ26111.1 - 8.4e-09 35.2 0.0 1.5e-08 34.3 0.0 1.4 1 1 0 1 1 1 1 ACT domain ACT_4 PF13291.6 CTQ26111.1 - 0.00014 22.3 0.0 0.0002 21.9 0.0 1.2 1 0 0 1 1 1 1 ACT domain TPP_enzyme_N PF02776.18 CTQ26112.1 - 1.2e-58 197.5 2.3 2.9e-57 193.0 0.1 2.6 2 1 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 CTQ26112.1 - 2.9e-48 163.1 0.3 1.1e-47 161.2 0.3 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 CTQ26112.1 - 2.1e-47 160.7 1.7 2.5e-47 160.5 0.3 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO_dh PF02552.16 CTQ26112.1 - 0.015 15.1 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TisB_toxin PF13939.6 CTQ26113.1 - 4.8e-19 67.8 11.1 5e-19 67.8 11.1 1.0 1 0 0 1 1 1 1 Toxin TisB, type I toxin-antitoxin system Acetyltransf_10 PF13673.7 CTQ26114.1 - 1.5e-16 60.5 0.0 1.9e-16 60.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ26114.1 - 3.4e-11 43.4 0.0 4e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ26114.1 - 1.7e-10 41.2 0.0 2.5e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ26114.1 - 0.00044 20.3 0.0 0.0025 17.9 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ26114.1 - 0.0032 17.4 0.1 0.016 15.2 0.1 1.9 1 1 0 1 1 1 1 FR47-like protein PanZ PF12568.8 CTQ26114.1 - 0.0055 16.4 0.0 0.0065 16.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 CTQ26114.1 - 0.014 15.4 0.1 0.047 13.7 0.1 1.8 2 0 0 2 2 2 0 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 CTQ26114.1 - 0.02 15.0 0.0 0.031 14.4 0.0 1.2 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 CTQ26114.1 - 0.097 12.1 0.0 0.21 11.0 0.0 1.5 2 0 0 2 2 2 0 Putative acetyl-transferase EamA PF00892.20 CTQ26115.1 - 1.1e-16 61.2 31.7 1.1e-12 48.3 9.3 2.2 2 0 0 2 2 2 2 EamA-like transporter family Multi_Drug_Res PF00893.19 CTQ26115.1 - 0.095 13.4 17.7 0.13 12.9 6.7 4.2 2 2 1 3 3 3 0 Small Multidrug Resistance protein Mg_trans_NIPA PF05653.14 CTQ26115.1 - 7.1 5.6 13.2 0.19 10.8 4.3 2.5 1 1 2 3 3 3 0 Magnesium transporter NIPA MFS_1 PF07690.16 CTQ26116.1 - 4.4e-38 131.1 51.1 4.4e-38 131.1 51.1 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_3 PF05977.13 CTQ26116.1 - 1.6e-05 23.5 9.8 1.6e-05 23.5 9.8 2.1 1 1 1 2 2 2 1 Transmembrane secretion effector TRI12 PF06609.13 CTQ26116.1 - 4.3e-05 22.1 3.9 6.9e-05 21.5 3.9 1.3 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) DUF2530 PF10745.9 CTQ26116.1 - 0.013 15.7 0.8 0.013 15.7 0.8 3.9 3 1 1 4 4 4 0 Protein of unknown function (DUF2530) TcpE PF12648.7 CTQ26116.1 - 1.6 9.3 0.0 1.6 9.3 0.0 4.3 3 2 2 5 5 5 0 TcpE family LysR_substrate PF03466.20 CTQ26117.1 - 7.6e-29 100.6 0.0 1.1e-28 100.1 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26117.1 - 1.1e-19 70.1 1.2 2.3e-19 69.1 1.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 CTQ26117.1 - 0.013 15.0 0.0 0.034 13.7 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_30 PF13556.6 CTQ26117.1 - 0.038 13.8 0.1 0.092 12.6 0.0 1.7 1 1 0 1 1 1 0 PucR C-terminal helix-turn-helix domain GntP_permease PF02447.16 CTQ26118.1 - 1.5e-158 528.1 48.0 1.8e-158 527.9 48.0 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 CTQ26118.1 - 4e-14 52.5 55.1 4e-14 52.5 55.1 1.9 1 1 1 2 2 2 1 Citrate transporter Na_H_antiport_2 PF13726.6 CTQ26118.1 - 0.43 10.8 28.1 0.18 11.9 4.8 3.9 3 1 0 3 3 3 0 Na+-H+ antiporter family PALP PF00291.25 CTQ26119.1 - 1.8e-65 221.3 0.3 2.4e-65 220.9 0.3 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme NmrA PF05368.13 CTQ26119.1 - 0.18 11.3 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family TYA PF01021.19 CTQ26120.1 - 0.017 15.4 0.2 0.031 14.6 0.2 1.4 1 0 0 1 1 1 0 TYA transposon protein DUF202 PF02656.15 CTQ26121.1 - 7e-12 45.6 1.0 7e-12 45.6 1.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF202) NADH_dh_m_C1 PF15088.6 CTQ26121.1 - 0.19 11.4 0.7 0.42 10.3 0.3 1.8 2 0 0 2 2 2 0 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial DUF4131 PF13567.6 CTQ26121.1 - 0.76 9.4 7.5 2.4 7.8 7.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Gram_pos_anchor PF00746.21 CTQ26121.1 - 3.3 7.8 0.0 3.3 7.8 0.0 2.7 3 0 0 3 3 3 0 LPXTG cell wall anchor motif DUF202 PF02656.15 CTQ26122.1 - 7.9e-16 58.3 1.5 7.9e-16 58.3 1.5 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF202) NMN_transporter PF04973.12 CTQ26122.1 - 0.0012 18.9 1.1 0.0013 18.7 0.6 1.3 1 1 0 1 1 1 1 Nicotinamide mononucleotide transporter DUF1129 PF06570.11 CTQ26122.1 - 0.0014 18.2 0.3 0.0016 18.0 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) DUF996 PF06195.13 CTQ26122.1 - 0.0039 17.5 0.5 0.0049 17.2 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF996) DctQ PF04290.12 CTQ26122.1 - 0.0074 16.2 3.3 0.011 15.7 3.3 1.3 1 1 0 1 1 1 1 Tripartite ATP-independent periplasmic transporters, DctQ component Trp_oprn_chp PF09534.10 CTQ26122.1 - 0.49 10.2 4.1 1.2 8.9 3.4 1.7 1 1 1 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Glyco_hydro_4 PF02056.16 CTQ26123.1 - 1.3e-65 220.4 0.0 2e-65 219.8 0.0 1.3 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Glyco_hydro_4C PF11975.8 CTQ26123.1 - 2.6e-51 174.7 0.0 3.6e-51 174.2 0.0 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain PTS_EIIC PF02378.18 CTQ26124.1 - 5.4e-71 239.3 32.3 5.4e-71 239.3 32.3 1.6 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ26124.1 - 1.4e-12 46.8 0.8 2.2e-12 46.2 0.1 1.6 2 0 0 2 2 2 1 phosphotransferase system, EIIB EIID-AGA PF03613.14 CTQ26124.1 - 9 5.4 14.4 0.087 12.0 3.5 2.2 2 0 0 2 2 2 0 PTS system mannose/fructose/sorbose family IID component UTRA PF07702.13 CTQ26125.1 - 1.4e-32 112.5 0.0 2e-32 112.0 0.0 1.3 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 CTQ26125.1 - 4.7e-22 77.4 0.0 1.5e-21 75.8 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 CTQ26125.1 - 1.6e-05 24.6 0.1 4.4e-05 23.1 0.0 1.8 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ26125.1 - 0.00042 20.2 0.0 0.0011 18.9 0.0 1.7 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 CTQ26125.1 - 0.0073 16.2 0.0 0.023 14.6 0.0 1.9 1 0 0 1 1 1 1 MarR family RP-C PF03428.13 CTQ26125.1 - 0.014 15.0 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain MarR PF01047.22 CTQ26125.1 - 0.018 14.9 0.0 0.049 13.6 0.0 1.7 1 0 0 1 1 1 0 MarR family UPF0728 PF15092.6 CTQ26125.1 - 0.039 13.8 0.1 0.071 12.9 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 TrmB PF01978.19 CTQ26125.1 - 0.08 12.8 0.0 0.21 11.5 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_41 PF14502.6 CTQ26125.1 - 0.089 12.5 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4423 PF14394.6 CTQ26125.1 - 0.1 12.3 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_7 PF02796.15 CTQ26125.1 - 0.11 12.5 0.0 0.86 9.7 0.0 2.4 1 1 1 2 2 2 0 Helix-turn-helix domain of resolvase HTH_36 PF13730.6 CTQ26125.1 - 0.17 11.9 0.0 0.46 10.5 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Asp-Al_Ex PF06826.12 CTQ26126.1 - 3.2e-89 297.1 44.5 3.1e-47 160.5 16.0 2.2 2 0 0 2 2 2 2 Predicted Permease Membrane Region TrkA_C PF02080.21 CTQ26126.1 - 9.2e-19 67.1 1.7 5.6e-10 38.9 0.4 2.5 2 0 0 2 2 2 2 TrkA-C domain Bro-N PF02498.17 CTQ26127.1 - 0.00034 21.2 0.1 0.0017 19.0 0.0 2.1 3 0 0 3 3 3 1 BRO family, N-terminal domain HSP20 PF00011.21 CTQ26128.1 - 8.3e-21 74.1 0.0 1.1e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 CTQ26128.1 - 8.2e-06 25.3 0.0 9.2e-05 21.9 0.0 2.0 1 1 0 1 1 1 1 HSP20-like domain found in ArsA Glyco_hydro_62 PF03664.13 CTQ26128.1 - 0.18 11.1 0.0 0.33 10.2 0.0 1.4 2 0 0 2 2 2 0 Glycosyl hydrolase family 62 HSP20 PF00011.21 CTQ26129.1 - 4e-22 78.3 0.0 5.5e-22 77.8 0.0 1.2 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 CTQ26129.1 - 0.0084 15.6 0.0 0.014 14.9 0.0 1.4 1 1 0 1 1 1 1 HSP20-like domain found in ArsA DUF1375 PF07119.12 CTQ26130.1 - 3.5e-06 27.3 1.9 7.2e-06 26.3 1.9 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1375) DUF3748 PF12566.8 CTQ26131.1 - 4.6e-56 188.1 3.2 2.9e-54 182.2 1.0 3.3 4 0 0 4 4 4 1 Protein of unknown function (DUF3748) PD40 PF07676.12 CTQ26131.1 - 3e-07 30.2 0.3 0.0014 18.5 0.0 3.9 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat Proteasome_A_N PF10584.9 CTQ26131.1 - 0.037 13.7 0.1 6.9 6.4 0.0 3.3 3 0 0 3 3 3 0 Proteasome subunit A N-terminal signature DPPIV_N PF00930.21 CTQ26131.1 - 0.077 11.7 0.1 25 3.5 0.0 3.6 4 0 0 4 4 4 0 Dipeptidyl peptidase IV (DPP IV) N-terminal region WD40 PF00400.32 CTQ26131.1 - 2.9 8.9 8.2 17 6.5 2.5 4.0 3 1 0 3 3 3 0 WD domain, G-beta repeat MFS_1 PF07690.16 CTQ26132.1 - 7.8e-60 202.6 33.5 7.8e-60 202.6 33.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ26132.1 - 6.8e-07 28.5 28.2 1.6e-06 27.3 27.8 1.9 1 1 0 1 1 1 1 Sugar (and other) transporter SPC12 PF06645.13 CTQ26132.1 - 0.07 13.2 0.1 0.07 13.2 0.1 4.0 4 1 1 5 5 5 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Pkr1 PF08636.10 CTQ26132.1 - 0.59 10.3 12.2 6.1 7.1 3.6 3.6 3 0 0 3 3 3 0 ER protein Pkr1 MR_MLE_C PF13378.6 CTQ26134.1 - 2.1e-55 187.7 0.0 3e-55 187.2 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 CTQ26134.1 - 5.4e-30 104.0 0.0 9.9e-30 103.2 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Aldolase PF01081.19 CTQ26135.1 - 1.9e-29 102.5 0.2 2.4e-29 102.2 0.2 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase TMP-TENI PF02581.17 CTQ26135.1 - 1e-05 24.9 0.0 8e-05 22.0 0.0 2.4 1 1 1 2 2 2 1 Thiamine monophosphate synthase S-AdoMet_synt_C PF02773.16 CTQ26135.1 - 0.12 12.4 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain DGOK PF05035.12 CTQ26136.1 - 5e-92 307.8 0.4 5.6e-92 307.7 0.4 1.0 1 0 0 1 1 1 1 2-keto-3-deoxy-galactonokinase FCD PF07729.12 CTQ26137.1 - 6.5e-26 91.2 7.2 1e-25 90.6 7.2 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 CTQ26137.1 - 2.9e-15 55.7 0.0 6.5e-15 54.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family TFIIE_alpha PF02002.17 CTQ26137.1 - 0.026 14.4 0.1 0.086 12.7 0.1 1.8 1 1 1 2 2 2 0 TFIIE alpha subunit DUF2673 PF10880.8 CTQ26137.1 - 0.089 12.9 0.4 1.1 9.5 0.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2673) DUF1488 PF07369.11 CTQ26137.1 - 0.23 11.5 1.7 4.5 7.3 0.0 3.0 3 1 1 4 4 4 0 Protein of unknown function (DUF1488) Bac_surface_Ag PF01103.23 CTQ26138.1 - 1.3e-11 44.6 6.6 1.7e-11 44.2 6.6 1.1 1 0 0 1 1 1 1 Surface antigen OMP_b-brl PF13505.6 CTQ26139.1 - 0.00083 19.5 1.5 0.0027 17.9 1.1 1.9 1 1 1 2 2 2 2 Outer membrane protein beta-barrel domain Hydrolase_3 PF08282.12 CTQ26140.1 - 9.1e-67 225.5 0.0 1e-66 225.3 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 CTQ26140.1 - 2.4e-16 60.0 0.0 4.4e-08 32.9 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 CTQ26140.1 - 1.1e-09 38.9 3.9 0.00022 21.6 0.1 3.3 2 1 1 3 3 3 3 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 CTQ26140.1 - 0.00016 21.7 0.0 0.0056 16.8 0.0 2.5 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ26140.1 - 0.00041 20.8 1.4 0.48 10.8 0.0 3.0 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CTQ26140.1 - 0.00074 19.6 0.2 0.017 15.2 0.0 2.6 2 1 1 3 3 3 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ26140.1 - 0.019 15.0 0.1 0.16 12.1 0.0 2.2 2 0 0 2 2 2 0 HAD-hyrolase-like DNA_gyraseB PF00204.25 CTQ26141.1 - 8.3e-60 201.2 0.0 1.7e-59 200.2 0.0 1.6 1 0 0 1 1 1 1 DNA gyrase B GyrB_insert PF18053.1 CTQ26141.1 - 8.3e-54 181.9 0.1 1.5e-53 181.1 0.1 1.5 1 0 0 1 1 1 1 DNA gyrase B subunit insert domain DNA_gyraseB_C PF00986.21 CTQ26141.1 - 8.8e-31 105.9 0.1 2.4e-30 104.5 0.1 1.8 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 CTQ26141.1 - 3.3e-22 79.1 0.1 8.3e-22 77.8 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 CTQ26141.1 - 2.7e-18 66.1 0.0 6.9e-18 64.8 0.0 1.7 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 CTQ26141.1 - 0.0018 18.1 0.1 0.0044 16.8 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMC_N PF02463.19 CTQ26142.1 - 1.4e-40 139.1 0.0 1.6e-40 138.9 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 CTQ26142.1 - 4.1e-10 39.9 0.0 5.1e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 CTQ26142.1 - 3.2e-08 34.3 0.2 8.5e-08 32.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 CTQ26142.1 - 1.5e-06 28.3 0.0 3.6e-06 27.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_27 PF13514.6 CTQ26142.1 - 3.8e-06 26.7 0.1 6.7e-06 25.8 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ26142.1 - 0.0007 19.3 0.1 0.0035 17.0 0.0 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_tran PF00005.27 CTQ26142.1 - 0.0045 17.5 0.0 0.025 15.1 0.0 2.0 2 0 0 2 2 2 1 ABC transporter Aim19 PF10315.9 CTQ26142.1 - 0.022 15.1 0.0 0.77 10.1 0.0 2.3 2 0 0 2 2 2 0 Altered inheritance of mitochondria protein 19 AAA_13 PF13166.6 CTQ26142.1 - 0.054 12.2 0.0 0.17 10.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 CTQ26142.1 - 0.054 13.9 3.7 1.3 9.3 3.7 2.6 1 1 0 1 1 1 0 AAA ATPase domain DNA_pol3_beta PF00712.19 CTQ26143.1 - 1.1e-46 157.9 0.0 2e-40 137.7 0.0 3.1 3 0 0 3 3 3 3 DNA polymerase III beta subunit, N-terminal domain DNA_pol3_beta_2 PF02767.16 CTQ26143.1 - 5.5e-46 155.6 0.0 4.5e-40 136.5 0.0 3.4 3 1 0 3 3 3 2 DNA polymerase III beta subunit, central domain DNA_pol3_beta_3 PF02768.15 CTQ26143.1 - 3.3e-45 152.8 0.8 6.5e-45 151.9 0.2 1.8 2 0 0 2 2 2 1 DNA polymerase III beta subunit, C-terminal domain TubC_N PF18563.1 CTQ26143.1 - 0.089 12.8 0.0 1.5 8.9 0.0 2.5 2 0 0 2 2 2 0 TubC N-terminal docking domain Bac_DnaA PF00308.18 CTQ26144.1 - 4.9e-99 330.6 0.2 7.3e-99 330.0 0.2 1.3 1 0 0 1 1 1 1 Bacterial dnaA protein Bac_DnaA_C PF08299.11 CTQ26144.1 - 4.5e-33 113.1 0.3 1.3e-32 111.6 0.1 1.9 2 0 0 2 2 2 1 Bacterial dnaA protein helix-turn-helix DnaA_N PF11638.8 CTQ26144.1 - 1e-20 73.2 0.2 2.3e-20 72.1 0.2 1.7 1 0 0 1 1 1 1 DnaA N-terminal domain IstB_IS21 PF01695.17 CTQ26144.1 - 7.9e-11 42.0 0.0 1.5e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 CTQ26144.1 - 2.9e-06 27.7 0.0 1.6e-05 25.3 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Kinesin PF00225.23 CTQ26144.1 - 0.00082 18.4 0.0 0.0021 17.0 0.0 1.6 1 1 0 1 1 1 1 Kinesin motor domain AAA_16 PF13191.6 CTQ26144.1 - 0.0011 19.4 0.4 0.0055 17.1 0.2 2.4 2 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 CTQ26144.1 - 0.0014 18.6 0.1 0.021 14.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CTQ26144.1 - 0.0059 16.9 2.9 0.9 9.8 1.2 3.3 2 1 0 2 2 2 1 AAA domain NACHT PF05729.12 CTQ26144.1 - 0.025 14.5 0.0 0.056 13.4 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AFG1_ATPase PF03969.16 CTQ26144.1 - 0.033 13.1 0.2 0.093 11.6 0.2 1.7 1 1 0 1 1 1 0 AFG1-like ATPase ATPase_2 PF01637.18 CTQ26144.1 - 0.041 13.8 0.1 0.13 12.1 0.1 1.9 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea DUF3037 PF11236.8 CTQ26144.1 - 0.088 13.2 0.8 12 6.3 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3037) BLOC1S3 PF15753.5 CTQ26144.1 - 0.11 12.6 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 AAA_19 PF13245.6 CTQ26144.1 - 0.11 12.8 0.1 0.4 11.0 0.1 2.1 1 1 0 1 1 1 0 AAA domain Ribosomal_L34 PF00468.17 CTQ26145.1 - 1.8e-24 85.4 9.8 2e-24 85.3 9.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L34 Ribonuclease_P PF00825.18 CTQ26146.1 - 5.1e-30 103.8 0.1 5.6e-30 103.7 0.1 1.0 1 0 0 1 1 1 1 Ribonuclease P YidC_periplas PF14849.6 CTQ26147.1 - 1.5e-86 290.8 2.9 2.1e-86 290.3 2.9 1.2 1 0 0 1 1 1 1 YidC periplasmic domain 60KD_IMP PF02096.20 CTQ26147.1 - 2.4e-60 203.2 14.7 4.1e-60 202.5 14.7 1.4 1 0 0 1 1 1 1 60Kd inner membrane protein MnmE_helical PF12631.7 CTQ26148.1 - 5.2e-61 206.4 1.5 6.2e-61 206.2 1.5 1.1 1 0 0 1 1 1 1 MnmE helical domain TrmE_N PF10396.9 CTQ26148.1 - 4.9e-35 120.3 0.0 1.7e-34 118.6 0.0 2.0 2 0 0 2 2 2 1 GTP-binding protein TrmE N-terminus MMR_HSR1 PF01926.23 CTQ26148.1 - 3.6e-25 88.3 0.0 2.4e-24 85.6 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CTQ26148.1 - 1.3e-07 31.3 0.0 3.8e-07 29.8 0.0 1.7 2 0 0 2 2 2 1 Ferrous iron transport protein B Dynamin_N PF00350.23 CTQ26148.1 - 3.2e-05 24.1 0.0 0.00068 19.7 0.0 2.3 1 1 1 2 2 2 1 Dynamin family Ras PF00071.22 CTQ26148.1 - 0.00018 21.2 0.0 0.00031 20.4 0.0 1.4 1 0 0 1 1 1 1 Ras family AIG1 PF04548.16 CTQ26148.1 - 0.00023 20.6 0.0 0.00051 19.4 0.0 1.6 2 0 0 2 2 2 1 AIG1 family RsgA_GTPase PF03193.16 CTQ26148.1 - 0.00031 20.7 0.0 0.0094 15.9 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase Roc PF08477.13 CTQ26148.1 - 0.0012 19.1 0.0 0.003 17.8 0.0 1.7 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 CTQ26148.1 - 0.0012 19.3 0.0 0.0025 18.3 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_28 PF13521.6 CTQ26148.1 - 0.0058 16.9 0.0 0.014 15.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain Arf PF00025.21 CTQ26148.1 - 0.012 15.1 0.0 0.027 13.9 0.0 1.6 1 1 0 1 1 1 0 ADP-ribosylation factor family SRPRB PF09439.10 CTQ26148.1 - 0.04 13.4 0.0 0.075 12.5 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 CTQ26148.1 - 0.079 12.5 0.0 3.2 7.2 0.0 2.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 CTQ26148.1 - 0.13 11.6 0.0 0.28 10.5 0.0 1.5 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region Acetyltransf_1 PF00583.25 CTQ26149.1 - 3.6e-10 40.1 0.0 4.4e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ26149.1 - 1.7e-09 37.9 0.0 2.3e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ26149.1 - 2.8e-06 27.3 0.0 3.9e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ26149.1 - 0.0014 18.7 0.0 0.0021 18.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ26149.1 - 0.013 15.5 0.0 0.028 14.4 0.0 1.5 1 1 0 1 1 1 0 FR47-like protein Acetyltransf_CG PF14542.6 CTQ26149.1 - 0.061 13.4 0.0 0.094 12.9 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase MFS_1 PF07690.16 CTQ26150.1 - 4.7e-45 154.0 38.4 4.7e-45 154.0 38.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ26150.1 - 2.2e-11 43.3 8.8 2.2e-11 43.3 8.8 3.0 2 2 0 2 2 2 1 Sugar (and other) transporter TRI12 PF06609.13 CTQ26150.1 - 2.5e-10 39.4 2.6 5.1e-10 38.4 2.6 1.5 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_4 PF06779.14 CTQ26150.1 - 1.7e-05 24.3 5.4 1.7e-05 24.3 5.4 2.3 1 1 0 2 2 2 1 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 CTQ26150.1 - 4.9e-05 22.1 0.7 4.9e-05 22.1 0.7 3.6 1 1 3 4 4 4 2 MFS/sugar transport protein MFS_1_like PF12832.7 CTQ26150.1 - 0.18 10.6 17.1 0.042 12.7 1.3 3.1 2 1 1 3 3 3 0 MFS_1 like family LysR_substrate PF03466.20 CTQ26151.1 - 6.5e-13 48.5 5.7 1.2e-12 47.7 5.7 1.4 1 1 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26151.1 - 5.7e-12 45.4 0.0 1.2e-11 44.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_5 PF01022.20 CTQ26151.1 - 0.0031 17.3 0.8 0.0031 17.3 0.8 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family DUF746 PF05344.11 CTQ26151.1 - 0.011 15.5 0.1 0.029 14.2 0.1 1.7 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) Fe_dep_repress PF01325.19 CTQ26151.1 - 0.016 15.4 0.6 0.032 14.4 0.6 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 CTQ26151.1 - 0.04 13.9 0.0 0.088 12.8 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_Mga PF08280.11 CTQ26151.1 - 0.051 13.6 0.0 0.098 12.7 0.0 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Cro PF09048.10 CTQ26151.1 - 0.072 13.1 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Cro HTH_24 PF13412.6 CTQ26151.1 - 0.14 11.7 0.9 0.27 10.8 0.9 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding FMN_red PF03358.15 CTQ26153.1 - 2.4e-38 131.3 0.0 3e-38 131.0 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 CTQ26153.1 - 5.5e-08 32.8 0.0 7.6e-08 32.3 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Xan_ur_permease PF00860.20 CTQ26154.1 - 5.3e-42 143.9 52.9 5.3e-42 143.9 52.9 1.9 1 1 1 2 2 2 2 Permease family HAD_2 PF13419.6 CTQ26155.1 - 4.3e-23 82.3 0.0 5.1e-23 82.1 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ26155.1 - 2.8e-11 44.1 0.0 2.1e-10 41.2 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ26155.1 - 0.00021 21.7 0.0 0.00028 21.4 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ26155.1 - 0.05 13.7 0.0 0.079 13.0 0.0 1.4 1 0 0 1 1 1 0 HAD-hyrolase-like Hydrolase_6 PF13344.6 CTQ26155.1 - 0.12 12.5 0.0 1.2 9.3 0.0 2.3 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Glucosamine_iso PF01182.20 CTQ26156.1 - 3.8e-18 66.2 0.0 5.4e-18 65.7 0.0 1.2 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Esterase PF00756.20 CTQ26157.1 - 1.3e-20 74.1 0.0 5.1e-20 72.2 0.0 1.8 1 1 0 1 1 1 1 Putative esterase CBM_48 PF02922.18 CTQ26157.1 - 1.8e-07 31.4 0.0 4.3e-07 30.2 0.0 1.5 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Abhydrolase_2 PF02230.16 CTQ26157.1 - 0.002 18.0 0.1 0.018 14.8 0.1 2.1 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase DLH PF01738.18 CTQ26157.1 - 0.049 13.2 0.0 0.076 12.6 0.0 1.3 1 0 0 1 1 1 0 Dienelactone hydrolase family LamB PF02264.15 CTQ26158.1 - 7e-82 276.3 20.6 8.4e-82 276.1 20.6 1.1 1 0 0 1 1 1 1 LamB porin Sugarporin_N PF11471.8 CTQ26158.1 - 5.2e-13 48.7 2.2 8.5e-13 48.0 2.2 1.4 1 0 0 1 1 1 1 Maltoporin periplasmic N-terminal extension PhoU PF01895.19 CTQ26159.1 - 1.5e-39 134.3 9.2 3.1e-21 75.6 2.0 2.1 2 0 0 2 2 2 2 PhoU domain HATPase_c_2 PF13581.6 CTQ26159.1 - 0.053 13.5 0.1 0.096 12.6 0.1 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain ABC_tran PF00005.27 CTQ26160.1 - 1.1e-34 119.9 0.0 1.6e-34 119.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26160.1 - 2.6e-10 40.6 0.1 7.9e-05 22.6 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26160.1 - 1.8e-07 30.9 0.0 8.7e-07 28.6 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 CTQ26160.1 - 2.9e-06 27.3 0.0 2.9e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ26160.1 - 5e-05 23.6 0.0 0.00014 22.1 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ26160.1 - 9.8e-05 22.0 0.0 0.00019 21.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ26160.1 - 0.00012 22.1 0.0 0.00027 20.9 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 CTQ26160.1 - 0.00015 22.2 0.0 0.00029 21.3 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 CTQ26160.1 - 0.00031 21.3 1.1 0.00041 20.9 1.1 1.5 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 CTQ26160.1 - 0.00054 19.9 0.0 0.00086 19.3 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain PRK PF00485.18 CTQ26160.1 - 0.0057 16.4 0.0 0.019 14.7 0.0 1.9 3 0 0 3 3 3 1 Phosphoribulokinase / Uridine kinase family AAA_30 PF13604.6 CTQ26160.1 - 0.0097 15.6 0.0 0.18 11.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 CTQ26160.1 - 0.03 14.5 0.0 0.078 13.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain G-alpha PF00503.20 CTQ26160.1 - 0.052 12.7 0.0 0.054 12.6 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_24 PF13479.6 CTQ26160.1 - 0.053 13.2 0.1 0.11 12.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 CTQ26160.1 - 0.071 12.6 0.0 0.24 10.8 0.0 1.9 1 1 0 1 1 1 0 PhoH-like protein IstB_IS21 PF01695.17 CTQ26160.1 - 0.079 12.7 0.1 1.9 8.2 0.0 2.7 3 0 0 3 3 3 0 IstB-like ATP binding protein ATPase_2 PF01637.18 CTQ26160.1 - 0.091 12.7 0.0 0.36 10.7 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 CTQ26160.1 - 0.1 13.0 0.0 0.24 11.8 0.0 1.8 1 0 0 1 1 1 0 RNA helicase Adeno_IVa2 PF02456.15 CTQ26160.1 - 0.11 11.2 0.0 0.37 9.5 0.0 1.7 2 0 0 2 2 2 0 Adenovirus IVa2 protein TniB PF05621.11 CTQ26160.1 - 0.11 11.9 0.0 0.44 9.9 0.0 1.8 2 0 0 2 2 2 0 Bacterial TniB protein AAA_5 PF07728.14 CTQ26160.1 - 0.12 12.4 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 CTQ26160.1 - 0.14 12.4 0.0 0.29 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CTQ26160.1 - 0.15 12.6 0.0 0.29 11.7 0.0 1.6 2 0 0 2 2 1 0 AAA domain APS_kinase PF01583.20 CTQ26160.1 - 0.15 12.0 0.0 0.32 10.9 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_25 PF13481.6 CTQ26160.1 - 0.17 11.5 0.0 0.65 9.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 CTQ26161.1 - 1.1e-29 103.5 18.8 1.1e-29 103.5 18.8 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component CrgA PF06781.12 CTQ26161.1 - 0.41 10.7 0.1 0.41 10.7 0.1 2.9 3 0 0 3 3 3 0 Cell division protein CrgA BPD_transp_1 PF00528.22 CTQ26162.1 - 2.3e-16 60.1 21.9 2.3e-16 60.1 21.9 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1158 PF06643.11 CTQ26162.1 - 0.061 13.8 0.2 0.061 13.8 0.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1158) PBP_like_2 PF12849.7 CTQ26163.1 - 1.4e-60 205.4 7.8 1.8e-60 205.0 7.8 1.1 1 0 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 CTQ26163.1 - 1e-11 44.3 0.0 2.4e-11 43.1 0.0 1.7 1 1 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 CTQ26163.1 - 0.00083 19.2 0.1 0.0016 18.3 0.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SIS PF01380.22 CTQ26164.1 - 3.9e-65 217.6 0.2 3.6e-33 114.2 0.2 2.3 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 CTQ26164.1 - 4.2e-21 75.5 0.1 7.6e-21 74.7 0.1 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 CTQ26164.1 - 1e-14 54.5 0.0 2e-14 53.6 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 CTQ26164.1 - 3.1e-07 29.6 0.1 5.2e-06 25.6 0.1 2.2 2 0 0 2 2 2 1 Glutamine amidotransferases class-II Hexapep PF00132.24 CTQ26165.1 - 2.2e-30 103.2 12.9 2.7e-08 33.2 0.9 5.3 2 1 3 5 5 5 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 CTQ26165.1 - 1.5e-20 74.2 0.9 4.1e-20 72.8 0.9 1.8 1 1 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 CTQ26165.1 - 2e-12 47.2 0.0 3.2e-12 46.6 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep_2 PF14602.6 CTQ26165.1 - 2e-10 40.2 21.4 2e-06 27.4 0.5 5.3 4 1 1 5 5 5 4 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 CTQ26165.1 - 9.8e-08 32.0 0.2 2e-07 31.0 0.0 1.7 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 CTQ26165.1 - 0.00036 20.5 0.0 0.025 14.5 0.0 2.3 2 0 0 2 2 2 1 Cytidylyltransferase Fucokinase PF07959.12 CTQ26165.1 - 0.00043 19.3 0.1 0.044 12.7 0.1 2.8 2 1 1 3 3 3 1 L-fucokinase DUF4954 PF16314.5 CTQ26165.1 - 0.014 13.6 0.2 0.027 12.6 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4954) CofC PF01983.16 CTQ26165.1 - 0.029 13.6 0.0 0.054 12.7 0.0 1.3 1 0 0 1 1 1 0 Guanylyl transferase CofC like ATP-synt_DE_N PF02823.16 CTQ26169.1 - 1.1e-30 105.4 0.1 1.6e-30 104.8 0.1 1.3 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATP-synt_DE PF00401.20 CTQ26169.1 - 2.7e-13 49.9 6.9 4.4e-13 49.3 6.9 1.3 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ATP-synt_ab PF00006.25 CTQ26170.1 - 1.3e-63 214.5 0.0 1.8e-63 214.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 CTQ26170.1 - 1.4e-19 70.4 3.7 3.2e-19 69.2 3.7 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain T3SS_ATPase_C PF18269.1 CTQ26170.1 - 0.024 14.5 1.7 0.11 12.4 0.5 2.6 2 1 0 2 2 2 0 T3SS EscN ATPase C-terminal domain ATP-synt PF00231.19 CTQ26171.1 - 9e-97 324.1 0.0 1e-96 324.0 0.0 1.0 1 0 0 1 1 1 1 ATP synthase ATP-synt_ab PF00006.25 CTQ26172.1 - 2.6e-73 246.2 0.1 4.6e-73 245.4 0.1 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 CTQ26172.1 - 1.3e-45 154.8 0.7 2.4e-45 153.9 0.7 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 CTQ26172.1 - 4.3e-13 49.6 0.1 1e-12 48.4 0.1 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain ATPase PF06745.13 CTQ26172.1 - 6.7e-05 22.4 0.1 0.00012 21.5 0.1 1.4 1 0 0 1 1 1 1 KaiC ATPase_2 PF01637.18 CTQ26172.1 - 0.022 14.7 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea HAS-barrel PF09378.10 CTQ26172.1 - 0.045 13.9 0.1 0.22 11.7 0.0 2.2 2 1 0 2 2 2 0 HAS barrel domain OSCP PF00213.18 CTQ26173.1 - 3.1e-51 173.9 1.1 3.4e-51 173.8 1.1 1.0 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit Uteroglobin PF01099.17 CTQ26173.1 - 0.022 15.1 0.1 0.037 14.4 0.1 1.4 1 0 0 1 1 1 0 Uteroglobin family ATP-synt_B PF00430.18 CTQ26174.1 - 2.1e-40 137.9 19.3 2.5e-40 137.6 19.3 1.1 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) Mt_ATP-synt_B PF05405.14 CTQ26174.1 - 0.014 15.0 5.3 0.03 14.0 4.7 1.6 1 1 1 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) ESM4 PF15952.5 CTQ26174.1 - 0.029 14.8 5.1 0.054 13.9 5.2 1.4 1 1 0 1 1 1 0 Enhancer of split M4 family CRISPR_Cse1 PF09481.10 CTQ26174.1 - 0.034 13.2 6.1 0.04 13.0 6.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein Cse1 (CRISPR_cse1) V-ATPase_G_2 PF16999.5 CTQ26174.1 - 0.045 14.2 27.0 0.037 14.4 25.6 1.6 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit V-ATPase_G PF03179.15 CTQ26174.1 - 0.095 13.2 24.6 0.31 11.6 21.4 2.6 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF719 PF05334.13 CTQ26174.1 - 0.16 12.2 5.2 0.21 11.7 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF719) DivIVA PF05103.13 CTQ26174.1 - 0.26 11.4 22.9 2.1 8.4 22.9 2.1 1 1 0 1 1 1 0 DivIVA protein LMBR1 PF04791.16 CTQ26174.1 - 0.89 8.4 2.2 1.1 8.1 2.2 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein RNA_pol_Rpb2_45 PF10385.9 CTQ26174.1 - 2.2 8.6 10.6 0.13 12.6 2.1 2.6 2 2 0 2 2 2 0 RNA polymerase beta subunit external 1 domain ATP-synt_C PF00137.21 CTQ26175.1 - 1.2e-09 38.3 10.7 1.6e-09 37.9 10.6 1.3 1 1 0 1 1 1 1 ATP synthase subunit C HlyIII PF03006.20 CTQ26175.1 - 0.024 14.4 0.4 0.028 14.1 0.4 1.2 1 0 0 1 1 1 0 Haemolysin-III related ATP-synt_A PF00119.20 CTQ26176.1 - 5.6e-56 189.8 23.1 6.9e-56 189.5 23.1 1.0 1 0 0 1 1 1 1 ATP synthase A chain WHH PF14414.6 CTQ26176.1 - 0.057 13.3 0.3 0.1 12.5 0.3 1.4 1 0 0 1 1 1 0 A nuclease of the HNH/ENDO VII superfamily with conserved WHH CHD5 PF04420.14 CTQ26176.1 - 1.1 9.1 6.1 0.62 9.9 1.5 2.3 2 0 0 2 2 2 0 CHD5-like protein DUF3333 PF11812.8 CTQ26176.1 - 2.8 8.1 5.0 25 5.0 0.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3333) ATP-synt_I PF03899.15 CTQ26177.1 - 1.1e-15 57.8 13.1 1.6e-15 57.3 13.1 1.2 1 0 0 1 1 1 1 ATP synthase I chain GidB PF02527.15 CTQ26178.1 - 7.5e-64 214.4 0.0 8.9e-64 214.2 0.0 1.0 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_31 PF13847.6 CTQ26178.1 - 1.7e-06 27.9 0.0 3.2e-06 27.0 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ26178.1 - 7.6e-05 23.3 0.0 0.00013 22.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ26178.1 - 0.053 13.1 0.0 0.076 12.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain GIDA PF01134.22 CTQ26179.1 - 8.6e-170 565.0 0.0 1.1e-169 564.7 0.0 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A GIDA_assoc PF13932.6 CTQ26179.1 - 2.2e-79 266.5 0.8 3.2e-79 266.0 0.8 1.2 1 0 0 1 1 1 1 GidA associated domain FAD_binding_2 PF00890.24 CTQ26179.1 - 7.3e-08 31.9 3.0 0.00017 20.8 0.3 2.3 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 CTQ26179.1 - 1.6e-07 31.0 3.9 1.6e-07 31.0 3.9 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 CTQ26179.1 - 2.7e-05 23.5 1.6 7.2e-05 22.2 1.6 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 CTQ26179.1 - 4e-05 23.0 1.0 0.00011 21.6 1.0 1.7 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 CTQ26179.1 - 9.5e-05 21.3 3.0 0.0026 16.5 0.2 2.9 3 0 0 3 3 3 1 HI0933-like protein DAO PF01266.24 CTQ26179.1 - 0.00031 20.4 0.6 0.64 9.5 0.0 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 CTQ26179.1 - 0.0046 16.2 1.9 0.032 13.5 1.9 2.1 1 1 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 CTQ26179.1 - 0.0091 16.5 0.2 0.032 14.8 0.2 2.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ26179.1 - 0.13 12.5 0.9 1.3 9.3 0.5 2.7 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 CTQ26179.1 - 0.18 11.0 0.1 0.47 9.6 0.0 1.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 CTQ26179.1 - 0.47 10.4 4.0 0.2 11.6 0.3 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding Flavodoxin_1 PF00258.25 CTQ26180.1 - 2e-23 83.2 0.0 2.2e-23 83.1 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.7 CTQ26180.1 - 0.008 16.4 0.0 0.012 15.9 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain AsnC_trans_reg PF01037.21 CTQ26181.1 - 1.1e-17 63.8 0.1 1.8e-17 63.0 0.1 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 CTQ26181.1 - 6e-13 48.4 0.0 1.4e-12 47.2 0.0 1.7 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 CTQ26181.1 - 7.6e-13 47.8 0.0 1.6e-12 46.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 CTQ26181.1 - 5.5e-06 26.3 0.1 1.2e-05 25.3 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 CTQ26181.1 - 9.4e-05 22.3 0.0 0.00022 21.1 0.0 1.6 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 CTQ26181.1 - 0.00045 20.0 0.0 0.00081 19.2 0.0 1.4 1 0 0 1 1 1 1 MarR family B-block_TFIIIC PF04182.12 CTQ26181.1 - 0.0098 16.0 0.2 0.1 12.8 0.0 2.1 2 0 0 2 2 2 1 B-block binding subunit of TFIIIC HTH_41 PF14502.6 CTQ26181.1 - 0.013 15.2 0.1 0.088 12.5 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_34 PF13601.6 CTQ26181.1 - 0.045 13.9 0.0 0.093 12.9 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_5 PF01022.20 CTQ26181.1 - 0.054 13.4 0.0 0.098 12.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 CTQ26181.1 - 0.14 11.9 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain AsnA PF03590.15 CTQ26182.1 - 1e-94 316.5 0.0 1.3e-94 316.3 0.0 1.1 1 0 0 1 1 1 1 Aspartate-ammonia ligase tRNA-synt_2 PF00152.20 CTQ26182.1 - 0.00025 20.2 0.0 0.0044 16.1 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class II (D, K and N) DUF5569 PF17729.1 CTQ26182.1 - 0.038 13.9 0.0 0.061 13.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5569) Metallophos_3 PF14582.6 CTQ26182.1 - 0.069 12.5 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily VWA_CoxE PF05762.14 CTQ26183.1 - 1.7e-10 40.7 0.0 3.5e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 CTQ26183.1 - 4.2e-07 30.6 0.0 9.8e-07 29.4 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF2201 PF09967.9 CTQ26183.1 - 0.013 15.6 0.0 0.023 14.9 0.0 1.5 1 0 0 1 1 1 0 VWA-like domain (DUF2201) AAA_5 PF07728.14 CTQ26184.1 - 1.8e-25 89.6 0.0 3.1e-25 88.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_8 PF17868.1 CTQ26184.1 - 2e-23 82.0 0.5 5.5e-23 80.6 0.0 2.0 2 0 0 2 2 2 1 AAA lid domain DUF3763 PF12592.8 CTQ26184.1 - 6.2e-22 77.4 3.7 2.7e-21 75.4 3.7 2.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3763) Sigma54_activat PF00158.26 CTQ26184.1 - 0.0002 21.1 0.0 0.0039 16.9 0.0 2.4 1 1 0 1 1 1 1 Sigma-54 interaction domain Mg_chelatase PF01078.21 CTQ26184.1 - 0.0002 20.8 0.2 0.0029 17.0 0.0 2.5 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 CTQ26184.1 - 0.00029 20.7 0.0 0.00062 19.6 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 CTQ26184.1 - 0.0021 18.5 0.0 0.0048 17.3 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CTQ26184.1 - 0.0035 17.7 0.1 0.012 16.0 0.0 2.0 1 1 1 2 2 2 1 AAA ATPase domain IstB_IS21 PF01695.17 CTQ26184.1 - 0.015 15.0 0.0 0.13 11.9 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_2 PF07724.14 CTQ26184.1 - 0.022 14.9 0.0 0.21 11.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) AAA_PrkA PF08298.11 CTQ26184.1 - 0.042 12.8 0.0 2 7.3 0.0 2.1 1 1 0 2 2 2 0 PrkA AAA domain K_trans PF02705.16 CTQ26185.1 - 8.7e-209 694.5 25.1 1e-208 694.3 25.1 1.0 1 0 0 1 1 1 1 K+ potassium transporter RbsD_FucU PF05025.13 CTQ26186.1 - 9.9e-48 162.0 0.3 1.1e-47 161.8 0.3 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family NitrOD5 PF11537.8 CTQ26186.1 - 0.0027 17.8 0.2 0.027 14.6 0.1 2.0 1 1 1 2 2 2 1 Nitrosopumilus output domain 5 Coat_F PF07875.12 CTQ26186.1 - 0.12 12.6 0.6 0.23 11.7 0.6 1.4 1 0 0 1 1 1 0 Coat F domain ABC_tran PF00005.27 CTQ26187.1 - 5.3e-56 188.9 0.3 3.3e-28 98.9 0.1 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ26187.1 - 1.3e-07 31.8 0.1 0.012 15.4 0.0 2.9 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26187.1 - 9.1e-05 22.0 0.4 0.028 13.9 1.2 2.9 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ26187.1 - 0.00045 20.2 0.2 0.025 14.5 0.1 2.5 2 0 0 2 2 2 1 RsgA GTPase AAA_30 PF13604.6 CTQ26187.1 - 0.0021 17.8 6.7 0.0047 16.7 0.4 3.0 3 1 0 3 3 3 1 AAA domain AAA_29 PF13555.6 CTQ26187.1 - 0.0057 16.4 0.4 0.018 14.8 0.1 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain Ploopntkinase3 PF18751.1 CTQ26187.1 - 0.0062 16.5 0.6 0.014 15.4 0.1 1.8 2 0 0 2 2 2 1 P-loop Nucleotide Kinase3 ABC_ATPase PF09818.9 CTQ26187.1 - 0.0064 15.3 2.8 0.27 10.0 0.1 3.2 3 1 0 3 3 3 1 Predicted ATPase of the ABC class AAA_22 PF13401.6 CTQ26187.1 - 0.01 16.1 1.6 0.7 10.2 0.1 3.3 4 0 0 4 4 4 0 AAA domain MMR_HSR1 PF01926.23 CTQ26187.1 - 0.017 15.2 0.1 0.4 10.8 0.1 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase TsaE PF02367.17 CTQ26187.1 - 0.018 15.1 2.2 1.1 9.2 0.2 2.6 2 1 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 CTQ26187.1 - 0.025 15.0 0.4 1.4 9.3 0.1 2.5 2 1 0 2 2 2 0 AAA ATPase domain AAA_15 PF13175.6 CTQ26187.1 - 0.038 13.7 0.0 0.052 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 CTQ26187.1 - 0.04 14.4 0.0 0.099 13.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 CTQ26187.1 - 0.073 12.3 0.8 7.4 5.8 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin MukB PF04310.12 CTQ26187.1 - 0.23 11.2 0.1 0.23 11.2 0.1 1.9 3 0 0 3 3 2 0 MukB N-terminal RNA_helicase PF00910.22 CTQ26187.1 - 0.27 11.6 0.6 2.1 8.8 0.0 2.8 3 0 0 3 3 2 0 RNA helicase AAA PF00004.29 CTQ26187.1 - 0.54 10.7 2.8 57 4.1 0.0 3.7 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) BPD_transp_2 PF02653.16 CTQ26188.1 - 2.1e-52 177.9 43.4 2.1e-52 177.9 43.4 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF543 PF04418.12 CTQ26188.1 - 5.4 7.1 7.1 2.3 8.2 1.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF543) MccV PF17508.2 CTQ26188.1 - 6.5 7.4 8.8 16 6.1 2.1 2.7 2 0 0 2 2 2 0 Microcin V bacteriocin Peripla_BP_4 PF13407.6 CTQ26189.1 - 2.2e-60 204.4 10.9 2.6e-60 204.2 10.9 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ26189.1 - 5.1e-28 98.3 2.0 6.2e-28 98.0 2.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ26189.1 - 1.6e-16 61.1 0.1 6.6e-16 59.1 0.1 1.8 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_6 PF13458.6 CTQ26189.1 - 7e-14 52.2 5.6 1e-13 51.7 4.6 1.5 1 1 1 2 2 2 1 Periplasmic binding protein ABC_sub_bind PF04392.12 CTQ26189.1 - 2.4e-06 27.0 6.8 0.0025 17.1 1.0 2.3 1 1 1 2 2 2 2 ABC transporter substrate binding protein PucR PF07905.11 CTQ26189.1 - 0.029 14.6 0.0 0.51 10.6 0.0 2.4 1 1 1 2 2 2 0 Purine catabolism regulatory protein-like family PfkB PF00294.24 CTQ26190.1 - 1.3e-73 247.9 4.6 1.5e-73 247.7 4.6 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 CTQ26190.1 - 3.4e-15 56.1 0.6 4.8e-15 55.6 0.6 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Peripla_BP_3 PF13377.6 CTQ26191.1 - 1.3e-43 149.3 0.1 3.2e-43 147.9 0.1 1.6 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ26191.1 - 7e-35 120.8 0.0 8.7e-35 120.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 CTQ26191.1 - 8.9e-18 63.8 1.1 1.5e-17 63.1 1.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ26191.1 - 2.1e-17 63.6 0.0 3.8e-17 62.7 0.0 1.4 2 0 0 2 2 2 1 Periplasmic binding protein domain HTH_38 PF13936.6 CTQ26191.1 - 0.069 12.9 0.0 0.69 9.7 0.0 2.6 3 0 0 3 3 3 0 Helix-turn-helix domain Borrelia_REV PF03978.13 CTQ26191.1 - 0.13 12.2 0.3 0.17 11.8 0.3 1.2 1 0 0 1 1 1 0 Borrelia burgdorferi REV protein HTH_Tnp_ISL3 PF13542.6 CTQ26191.1 - 0.14 11.6 0.1 0.26 10.8 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_3 PF01381.22 CTQ26191.1 - 0.15 12.1 0.0 0.47 10.6 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix HTH_35 PF13693.6 CTQ26191.1 - 0.17 11.9 0.0 0.41 10.7 0.0 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding MFS_1 PF07690.16 CTQ26192.1 - 4.5e-53 180.4 58.6 9.2e-46 156.4 44.6 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 CTQ26192.1 - 3.9e-05 22.2 11.0 3.9e-05 22.2 11.0 2.3 2 0 0 2 2 2 2 Transmembrane secretion effector MFS_4 PF06779.14 CTQ26192.1 - 0.0012 18.2 9.4 0.0012 18.2 9.4 3.1 2 1 0 3 3 3 2 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 CTQ26192.1 - 0.036 12.6 40.4 0.051 12.1 8.4 2.7 2 1 0 2 2 2 0 MFS/sugar transport protein Saf_2TM PF18303.1 CTQ26192.1 - 6.8 6.3 10.9 0.76 9.4 0.4 3.3 3 0 0 3 3 3 0 SAVED-fused 2TM effector domain FCD PF07729.12 CTQ26193.1 - 9e-21 74.6 0.4 1.5e-20 73.9 0.4 1.4 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 CTQ26193.1 - 2.9e-19 68.5 0.5 1.3e-18 66.4 0.3 2.2 1 1 1 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 CTQ26193.1 - 4.3e-05 23.4 0.1 0.00033 20.5 0.0 2.2 2 0 0 2 2 2 1 HTH domain ComR_TPR PF18710.1 CTQ26193.1 - 0.0048 16.5 0.1 0.04 13.5 0.0 2.0 1 1 1 2 2 2 1 ComR tetratricopeptide FadR_C PF07840.12 CTQ26193.1 - 0.0076 16.2 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 FadR C-terminal domain PaaX PF07848.12 CTQ26193.1 - 0.041 14.1 0.0 0.1 12.8 0.0 1.6 1 0 0 1 1 1 0 PaaX-like protein HTH_24 PF13412.6 CTQ26193.1 - 0.051 13.1 0.0 0.13 11.9 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 CTQ26193.1 - 0.12 12.2 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_IclR PF09339.10 CTQ26193.1 - 0.14 12.0 0.0 0.35 10.7 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain LamB PF02264.15 CTQ26194.1 - 3.9e-35 122.5 3.7 4.3e-35 122.3 3.7 1.0 1 0 0 1 1 1 1 LamB porin OMP_b-brl PF13505.6 CTQ26194.1 - 0.0017 18.5 3.3 0.0017 18.5 3.3 1.9 1 1 1 2 2 2 1 Outer membrane protein beta-barrel domain Inhibitor_I36 PF03995.13 CTQ26194.1 - 0.069 13.1 0.4 1.2 9.1 0.1 2.4 2 1 0 2 2 2 0 Peptidase inhibitor family I36 DUF1722 PF08349.11 CTQ26195.1 - 3.1e-40 137.1 1.2 4.3e-40 136.6 1.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) DUF523 PF04463.12 CTQ26195.1 - 2.4e-37 128.0 0.0 4e-37 127.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF523) DUF3385 PF11865.8 CTQ26195.1 - 0.024 14.6 0.0 0.037 13.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) DUF3833 PF12915.7 CTQ26196.1 - 1.5e-67 226.3 1.4 1.7e-67 226.1 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3833) DUF4150 PF13665.6 CTQ26196.1 - 0.034 14.3 0.0 0.053 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4150) NOD2_WH PF17779.1 CTQ26196.1 - 0.034 14.5 0.0 0.06 13.7 0.0 1.4 1 0 0 1 1 1 0 NOD2 winged helix domain LPAM_1 PF08139.12 CTQ26196.1 - 0.42 11.2 10.4 0.12 13.0 4.6 2.3 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site Chalcone_3 PF16036.5 CTQ26197.1 - 0.016 15.3 0.0 0.022 14.9 0.0 1.2 1 0 0 1 1 1 0 Chalcone isomerase-like DUF2878 PF11086.8 CTQ26198.1 - 4.3e-27 95.2 30.3 4.9e-27 95.0 30.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2878) CMAS PF02353.20 CTQ26199.1 - 6.4e-89 297.9 0.1 7.9e-89 297.6 0.1 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 CTQ26199.1 - 2.6e-10 40.8 0.0 8.5e-10 39.2 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ26199.1 - 3.6e-10 40.3 0.0 3.3e-09 37.3 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ26199.1 - 2.2e-09 37.4 0.0 1.3e-08 34.9 0.0 2.2 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ26199.1 - 8.9e-06 26.4 0.0 2.2e-05 25.1 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 CTQ26199.1 - 0.00081 19.2 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 CTQ26199.1 - 0.019 14.5 0.0 0.033 13.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_2 PF00891.18 CTQ26199.1 - 0.036 13.3 0.0 0.058 12.7 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain Methyltransf_24 PF13578.6 CTQ26199.1 - 0.062 14.3 0.3 0.49 11.4 0.1 2.5 2 0 0 2 2 2 0 Methyltransferase domain DUF1365 PF07103.11 CTQ26200.1 - 1.6e-73 247.3 1.5 1.8e-73 247.2 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1365) Amino_oxidase PF01593.24 CTQ26201.1 - 9.7e-19 68.0 0.2 5.1e-18 65.6 0.0 1.8 1 1 1 2 2 2 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 CTQ26201.1 - 3.3e-14 52.8 0.7 7.6e-14 51.7 0.2 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 CTQ26201.1 - 5.6e-09 36.0 3.8 6.4e-08 32.6 3.3 2.1 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 CTQ26201.1 - 9.1e-05 21.3 0.0 0.041 12.6 0.3 2.1 2 0 0 2 2 2 2 HI0933-like protein NAD_binding_9 PF13454.6 CTQ26201.1 - 0.0003 20.8 0.1 0.19 11.7 0.2 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 CTQ26201.1 - 0.00055 19.1 0.8 0.00085 18.5 0.8 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 CTQ26201.1 - 0.00089 18.6 0.3 0.0015 17.8 0.3 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 CTQ26201.1 - 0.014 14.7 0.2 0.02 14.1 0.2 1.2 1 0 0 1 1 1 0 Thi4 family ApbA PF02558.16 CTQ26201.1 - 0.13 11.9 0.8 0.42 10.2 0.7 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA adh_short PF00106.25 CTQ26202.1 - 1.7e-36 125.6 0.0 2.1e-36 125.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ26202.1 - 3.6e-22 79.1 0.0 4.6e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ26202.1 - 4.6e-11 42.9 0.1 5.9e-11 42.6 0.1 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ26202.1 - 9e-10 38.4 0.0 2.6e-09 36.9 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 CTQ26202.1 - 5.9e-09 36.1 0.0 7.8e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 CTQ26202.1 - 0.00055 19.1 0.1 0.00068 18.8 0.1 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain F420_oxidored PF03807.17 CTQ26202.1 - 0.0029 18.1 0.0 0.0075 16.8 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GDP_Man_Dehyd PF16363.5 CTQ26202.1 - 0.0043 16.5 0.1 0.021 14.2 0.1 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NmrA PF05368.13 CTQ26202.1 - 0.094 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Shal-type PF11601.8 CTQ26202.1 - 0.096 12.2 0.0 0.22 11.1 0.0 1.6 1 0 0 1 1 1 0 Shal-type voltage-gated potassium channels, N-terminal SnoaL_2 PF12680.7 CTQ26203.1 - 1.7e-17 63.9 0.0 2.2e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain NTF2 PF02136.20 CTQ26203.1 - 5.1e-07 30.3 0.0 6.7e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL PF07366.12 CTQ26203.1 - 4.4e-05 23.3 0.0 6.6e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_4 PF13577.6 CTQ26203.1 - 0.0017 18.5 0.0 0.0023 18.1 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 CTQ26203.1 - 0.043 14.2 0.0 0.061 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) LEH PF07858.12 CTQ26203.1 - 0.1 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Limonene-1,2-epoxide hydrolase catalytic domain MerR_1 PF13411.6 CTQ26205.1 - 1.9e-18 66.3 0.0 4.2e-18 65.2 0.0 1.6 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR PF00376.23 CTQ26205.1 - 1.6e-13 50.2 0.4 3.9e-13 48.9 0.1 1.9 2 0 0 2 2 2 1 MerR family regulatory protein HTH_17 PF12728.7 CTQ26205.1 - 0.00058 20.0 0.0 0.0022 18.1 0.0 2.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 CTQ26205.1 - 0.0056 16.8 4.5 0.024 14.7 0.1 3.6 5 0 0 5 5 5 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ26205.1 - 0.022 14.6 0.0 0.19 11.6 0.0 2.4 2 0 0 2 2 2 0 Homeodomain-like domain Terminase_5 PF06056.12 CTQ26205.1 - 0.059 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) Lipocalin_2 PF08212.12 CTQ26206.1 - 6.6e-45 152.6 0.1 7.6e-45 152.4 0.1 1.0 1 0 0 1 1 1 1 Lipocalin-like domain Lipocalin PF00061.23 CTQ26206.1 - 5e-06 26.8 0.0 6.7e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 Lipocalin / cytosolic fatty-acid binding protein family DUF1294 PF06961.13 CTQ26207.1 - 1.7e-23 82.6 0.9 2.2e-23 82.3 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1294) DUF3311 PF11755.8 CTQ26207.1 - 0.0028 17.6 0.2 0.0086 16.0 0.2 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF3311) DUF3094 PF11293.8 CTQ26207.1 - 0.2 11.4 2.0 0.63 9.8 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) ACR_tran PF00873.19 CTQ26208.1 - 8.8e-235 781.8 1.2 1.1e-234 781.5 1.2 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 CTQ26208.1 - 4.1e-05 22.7 5.2 0.0032 16.4 0.8 2.8 2 0 0 2 2 2 2 MMPL family HlyD_D23 PF16576.5 CTQ26209.1 - 1.5e-59 200.9 0.0 2.1e-59 200.3 0.0 1.3 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_D4 PF16572.5 CTQ26209.1 - 1.2e-27 95.5 1.7 1.2e-26 92.3 0.2 2.4 2 0 0 2 2 2 1 Long alpha hairpin domain of cation efflux system protein, CusB HlyD_3 PF13437.6 CTQ26209.1 - 1.7e-12 48.0 0.2 1.2e-09 38.9 0.1 2.7 2 0 0 2 2 2 2 HlyD family secretion protein HlyD PF00529.20 CTQ26209.1 - 0.00041 20.2 0.8 0.00049 19.9 0.8 1.6 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl_2 PF13533.6 CTQ26209.1 - 0.033 14.0 0.1 6.8 6.6 0.0 2.8 2 0 0 2 2 2 0 Biotin-lipoyl like Biotin_lipoyl PF00364.22 CTQ26209.1 - 0.067 13.0 0.0 4 7.3 0.0 2.5 2 0 0 2 2 2 0 Biotin-requiring enzyme CusF_Ec PF11604.8 CTQ26210.1 - 2.9e-24 84.8 0.1 4.5e-24 84.2 0.1 1.3 1 0 0 1 1 1 1 Copper binding periplasmic protein CusF BamHI PF02923.15 CTQ26210.1 - 0.1 12.4 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Restriction endonuclease BamHI OEP PF02321.18 CTQ26211.1 - 7.8e-47 159.5 37.2 4e-26 92.0 12.3 2.1 2 0 0 2 2 2 2 Outer membrane efflux protein APG6_N PF17675.1 CTQ26211.1 - 0.059 13.9 4.0 0.69 10.4 0.3 2.4 2 0 0 2 2 2 0 Apg6 coiled-coil region Response_reg PF00072.24 CTQ26212.1 - 3e-27 95.0 0.0 4.5e-27 94.4 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ26212.1 - 2.7e-26 91.4 0.0 4.8e-26 90.6 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Peptidase_M29 PF02073.15 CTQ26212.1 - 0.15 10.8 0.0 0.17 10.6 0.0 1.1 1 0 0 1 1 1 0 Thermophilic metalloprotease (M29) MutS_I PF01624.20 CTQ26212.1 - 0.19 12.0 0.0 0.31 11.3 0.0 1.3 1 0 0 1 1 1 0 MutS domain I HATPase_c PF02518.26 CTQ26213.1 - 8.2e-20 71.4 0.0 1.6e-19 70.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ26213.1 - 3.5e-11 43.0 0.7 1.5e-10 41.0 0.7 2.2 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 CTQ26213.1 - 1.1e-10 41.7 0.2 4.9e-10 39.6 0.1 2.3 2 0 0 2 2 2 1 HAMP domain HATPase_c_5 PF14501.6 CTQ26213.1 - 1.3e-06 28.3 0.0 2.2e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 CTQ26213.1 - 2.9e-05 24.0 0.0 8.2e-05 22.6 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain DUF3139 PF11337.8 CTQ26213.1 - 0.027 15.1 1.1 4.7 7.9 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF3566 PF12089.8 CTQ26213.1 - 0.1 13.0 0.1 2.2 8.7 0.0 2.4 2 0 0 2 2 2 0 Transmembrane domain of unknown function (DUF3566) FeoB_associated PF12669.7 CTQ26213.1 - 2.6 8.5 4.0 2 8.9 0.8 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein DUF1778 PF08681.11 CTQ26214.1 - 3.7e-26 90.9 2.2 4.2e-26 90.7 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1778) Acetyltransf_7 PF13508.7 CTQ26215.1 - 4.4e-07 30.2 0.0 5.6e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ26215.1 - 1e-06 28.7 0.0 2.8e-06 27.3 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ26215.1 - 1.7e-05 25.1 0.0 2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 CTQ26215.1 - 0.00021 21.2 0.0 0.00042 20.2 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 CTQ26215.1 - 0.18 12.0 0.0 0.33 11.1 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Cupin_4 PF08007.12 CTQ26216.1 - 1.5e-100 336.7 0.0 1.8e-100 336.5 0.0 1.0 1 0 0 1 1 1 1 Cupin superfamily protein AraC_binding PF02311.19 CTQ26216.1 - 0.0088 15.9 0.1 0.02 14.8 0.1 1.6 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_2 PF07883.11 CTQ26216.1 - 0.05 13.3 0.2 0.28 10.9 0.0 2.2 3 0 0 3 3 3 0 Cupin domain Cupin_8 PF13621.6 CTQ26216.1 - 0.098 12.3 0.1 0.58 9.8 0.0 2.0 2 0 0 2 2 2 0 Cupin-like domain JmjC PF02373.22 CTQ26216.1 - 0.12 12.8 0.0 0.24 11.8 0.0 1.5 1 0 0 1 1 1 0 JmjC domain, hydroxylase Cupin_1 PF00190.22 CTQ26216.1 - 0.21 11.2 0.0 0.37 10.4 0.0 1.4 1 0 0 1 1 1 0 Cupin TAD2 PF18521.1 CTQ26216.1 - 0.72 9.9 3.7 6.7 6.9 0.4 2.7 2 0 0 2 2 2 0 Transactivation domain 2 Stn1_C PF12659.7 CTQ26218.1 - 0.085 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Telomere capping C-terminal wHTH ABC2_membrane_3 PF12698.7 CTQ26219.1 - 1.2e-33 116.6 15.4 1.5e-33 116.4 15.4 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 CTQ26219.1 - 2.7e-26 92.3 14.6 2.7e-26 92.3 14.6 1.9 3 0 0 3 3 3 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 CTQ26219.1 - 6.2e-16 58.5 17.8 8.7e-16 58.0 17.8 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 CTQ26219.1 - 7.2e-05 22.8 12.4 7.2e-05 22.8 12.4 2.9 2 1 1 3 3 3 1 ABC-2 family transporter protein ABC_tran PF00005.27 CTQ26220.1 - 3.5e-54 183.0 0.0 1.5e-25 90.3 0.0 2.7 3 0 0 3 3 3 2 ABC transporter ABC2_membrane_3 PF12698.7 CTQ26220.1 - 4.3e-40 137.9 3.5 5.6e-40 137.5 3.5 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 CTQ26220.1 - 3.2e-20 72.6 4.4 5.4e-20 71.8 4.4 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein AAA_21 PF13304.6 CTQ26220.1 - 1.5e-18 67.7 0.5 3.6e-05 23.7 0.0 4.3 4 0 0 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system ABC2_membrane PF01061.24 CTQ26220.1 - 2.5e-18 66.3 12.8 1.1e-17 64.2 10.6 2.1 2 0 0 2 2 2 1 ABC-2 type transporter AAA_15 PF13175.6 CTQ26220.1 - 7.2e-05 22.7 0.0 1.9 8.1 0.0 3.1 3 0 0 3 3 3 1 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ26220.1 - 0.0001 22.3 0.0 0.1 12.5 0.1 2.3 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 CTQ26220.1 - 0.0003 20.5 0.2 0.4 10.5 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain ABC2_membrane_4 PF12730.7 CTQ26220.1 - 0.00032 20.7 10.4 0.00065 19.7 10.4 1.4 1 0 0 1 1 1 1 ABC-2 family transporter protein AAA_16 PF13191.6 CTQ26220.1 - 0.00037 20.9 0.1 0.14 12.5 0.1 2.9 2 1 0 2 2 2 1 AAA ATPase domain MMR_HSR1 PF01926.23 CTQ26220.1 - 0.004 17.2 0.1 0.7 10.0 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase SbcCD_C PF13558.6 CTQ26220.1 - 0.0045 17.2 0.0 12 6.2 0.0 3.5 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 CTQ26220.1 - 0.0048 17.4 0.3 0.24 11.9 0.1 2.2 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 CTQ26220.1 - 0.013 15.0 0.4 48 3.3 0.0 3.8 4 0 0 4 4 4 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ26220.1 - 0.016 15.5 0.2 6.7 7.0 0.1 3.0 3 1 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 CTQ26220.1 - 0.042 14.2 0.1 4.4 7.7 0.0 2.5 2 0 0 2 2 2 0 RNA helicase AAA_5 PF07728.14 CTQ26220.1 - 0.046 13.7 0.2 4.5 7.3 0.0 2.7 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 CTQ26220.1 - 0.047 13.1 0.1 2.2 7.6 0.0 2.6 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI Rad17 PF03215.15 CTQ26220.1 - 0.053 13.4 0.0 1.7 8.6 0.0 2.2 2 0 0 2 2 2 0 Rad17 P-loop domain AAA PF00004.29 CTQ26220.1 - 0.074 13.5 0.3 8.5 6.8 0.0 2.8 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 CTQ26220.1 - 0.082 12.6 0.0 13 5.5 0.0 2.6 2 0 0 2 2 2 0 AAA domain MeaB PF03308.16 CTQ26220.1 - 0.12 11.4 0.5 13 4.6 0.1 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NIR_SIR PF01077.22 CTQ26220.1 - 0.13 11.8 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain AAA_25 PF13481.6 CTQ26220.1 - 0.17 11.5 0.2 2.4 7.7 0.0 2.7 3 0 0 3 3 3 0 AAA domain HlyD_3 PF13437.6 CTQ26221.1 - 5.8e-17 62.3 0.6 1.8e-11 44.7 0.0 2.6 2 1 0 3 3 3 2 HlyD family secretion protein HlyD_D23 PF16576.5 CTQ26221.1 - 8e-13 48.1 9.0 4.1e-11 42.5 9.0 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 CTQ26221.1 - 1e-11 44.4 0.4 1e-11 44.4 0.4 2.7 3 0 0 3 3 3 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 CTQ26221.1 - 0.00014 21.6 0.1 0.0037 17.1 0.1 2.4 2 0 0 2 2 2 1 Biotin-requiring enzyme HlyD PF00529.20 CTQ26221.1 - 0.0062 16.4 0.2 0.0077 16.1 0.2 1.2 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Peptidase_M23 PF01551.22 CTQ26221.1 - 0.018 15.2 0.0 0.064 13.5 0.0 1.9 2 0 0 2 2 2 0 Peptidase family M23 PTS_EIIA_1 PF00358.20 CTQ26221.1 - 0.074 12.8 0.0 0.2 11.4 0.0 1.6 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DUF4407 PF14362.6 CTQ26221.1 - 0.3 10.4 20.7 0.51 9.6 20.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spc7 PF08317.11 CTQ26221.1 - 0.46 9.3 12.5 0.18 10.7 9.7 1.6 1 1 1 2 2 2 0 Spc7 kinetochore protein FliJ PF02050.16 CTQ26221.1 - 1.1 9.4 19.0 0.35 11.1 13.1 2.1 1 1 1 2 2 2 0 Flagellar FliJ protein DUF3584 PF12128.8 CTQ26221.1 - 8.6 3.7 18.2 12 3.3 18.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) tRNA-synt_1b PF00579.25 CTQ26222.1 - 2.1e-51 175.0 0.0 2.4e-51 174.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Peripla_BP_4 PF13407.6 CTQ26223.1 - 5.7e-51 173.6 0.7 6.8e-51 173.3 0.7 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ26223.1 - 0.00031 20.3 0.0 0.00047 19.7 0.0 1.4 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family ABC_tran PF00005.27 CTQ26224.1 - 1.2e-53 181.3 0.0 2.7e-27 96.0 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ26224.1 - 5.5e-09 36.3 0.1 0.0035 17.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26224.1 - 0.00013 21.5 0.6 0.49 9.8 0.0 3.4 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ26224.1 - 0.0004 20.1 0.0 0.01 15.6 0.0 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ26224.1 - 0.0012 18.7 0.0 0.0018 18.1 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 CTQ26224.1 - 0.0018 18.8 0.1 0.0039 17.7 0.1 1.5 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ26224.1 - 0.0058 16.6 0.1 0.034 14.1 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_25 PF13481.6 CTQ26224.1 - 0.011 15.3 0.4 0.17 11.4 0.0 2.9 3 1 0 3 3 3 0 AAA domain TsaE PF02367.17 CTQ26224.1 - 0.029 14.4 0.0 6 6.9 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 CTQ26224.1 - 0.05 12.9 0.1 0.19 11.0 0.1 1.9 2 0 0 2 2 2 0 Zeta toxin Rad17 PF03215.15 CTQ26224.1 - 0.05 13.5 0.0 0.21 11.5 0.0 1.9 2 0 0 2 2 2 0 Rad17 P-loop domain DUF2866 PF11065.8 CTQ26224.1 - 0.1 12.6 0.0 12 6.0 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2866) ABC_ATPase PF09818.9 CTQ26224.1 - 0.21 10.3 0.6 12 4.6 0.1 2.6 3 0 0 3 3 3 0 Predicted ATPase of the ABC class AAA_22 PF13401.6 CTQ26224.1 - 0.85 9.9 4.3 11 6.2 0.9 3.6 3 1 0 3 3 3 0 AAA domain BPD_transp_2 PF02653.16 CTQ26225.1 - 1e-39 136.3 40.1 1.4e-39 135.9 40.1 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF2583 PF10762.9 CTQ26225.1 - 4.7 7.7 9.7 4.5 7.8 4.6 3.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2583) BPD_transp_2 PF02653.16 CTQ26226.1 - 1.2e-38 132.9 39.8 1.2e-38 132.9 39.8 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Flavodoxin_2 PF02525.17 CTQ26227.1 - 1.9e-56 190.9 0.0 2.2e-56 190.7 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 CTQ26227.1 - 2.6e-14 53.3 0.0 4.5e-14 52.5 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase LysR_substrate PF03466.20 CTQ26228.1 - 7.7e-29 100.6 9.2 1.5e-28 99.6 9.2 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26228.1 - 3.9e-16 58.7 0.1 1.2e-15 57.2 0.1 1.9 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ26228.1 - 0.00016 21.4 0.0 0.00035 20.3 0.0 1.6 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_5 PF01022.20 CTQ26228.1 - 0.094 12.6 0.5 0.31 11.0 0.1 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Glyoxalase PF00903.25 CTQ26229.1 - 2.1e-12 47.3 0.0 2.9e-12 46.9 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 CTQ26229.1 - 0.00023 21.9 0.0 0.00029 21.6 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 CTQ26229.1 - 0.013 15.7 0.0 0.84 9.7 0.0 2.1 2 0 0 2 2 2 0 Glyoxalase-like domain DUF1398 PF07166.11 CTQ26229.1 - 0.077 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) Glyoxalase_4 PF13669.6 CTQ26229.1 - 0.13 12.5 0.0 2.7 8.3 0.0 2.2 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UvrD_C PF13361.6 CTQ26230.1 - 1.1e-12 48.1 0.0 1.7e-05 24.4 0.0 2.4 1 1 1 2 2 2 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 CTQ26230.1 - 8.2e-11 42.4 0.0 1.6e-10 41.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain UvrD-helicase PF00580.21 CTQ26230.1 - 1e-08 35.1 1.0 0.00011 21.8 0.0 2.6 1 1 1 2 2 2 2 UvrD/REP helicase N-terminal domain NERD PF08378.11 CTQ26230.1 - 2.4e-08 34.4 0.2 1.3e-07 32.0 0.0 2.4 2 0 0 2 2 2 1 Nuclease-related domain DUF2075 PF09848.9 CTQ26230.1 - 3.9e-06 26.3 0.1 6.8e-06 25.6 0.1 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 CTQ26230.1 - 9.3e-05 22.5 0.2 0.00024 21.2 0.2 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 CTQ26230.1 - 0.00014 21.7 0.1 0.00039 20.2 0.1 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase UvrD_C_2 PF13538.6 CTQ26230.1 - 0.00035 20.3 0.0 0.00074 19.3 0.0 1.5 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 CTQ26230.1 - 0.0021 17.8 0.0 0.0031 17.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 CTQ26230.1 - 0.0033 17.2 0.0 0.65 9.7 0.0 2.6 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 CTQ26230.1 - 0.0056 17.0 0.0 0.015 15.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ26230.1 - 0.026 14.9 0.0 0.056 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain PhoH PF02562.16 CTQ26230.1 - 0.06 12.8 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein RFXA_RFXANK_bdg PF15289.6 CTQ26230.1 - 0.11 12.9 0.0 0.29 11.5 0.0 1.7 1 0 0 1 1 1 0 Regulatory factor X-associated C-terminal binding domain Aminotran_1_2 PF00155.21 CTQ26231.1 - 3.3e-35 121.9 0.0 4.6e-35 121.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 CTQ26231.1 - 9.9e-16 57.1 0.2 2.2e-15 56.0 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_41 PF14502.6 CTQ26231.1 - 1.1e-06 28.2 0.0 2.4e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Aminotran_MocR PF12897.7 CTQ26231.1 - 4.9e-05 22.3 0.0 0.00024 20.0 0.0 2.0 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase Cys_Met_Meta_PP PF01053.20 CTQ26231.1 - 0.043 12.4 0.0 0.073 11.6 0.0 1.4 1 1 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme HTH_28 PF13518.6 CTQ26231.1 - 0.059 13.5 0.0 0.56 10.4 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain DegT_DnrJ_EryC1 PF01041.17 CTQ26231.1 - 0.091 12.1 0.0 0.16 11.3 0.0 1.4 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family HTH_Tnp_ISL3 PF13542.6 CTQ26231.1 - 0.15 11.5 0.0 1.8 8.0 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 MarR PF01047.22 CTQ26232.1 - 1.7e-10 40.7 0.2 5.5e-10 39.0 0.0 1.9 2 1 1 3 3 3 1 MarR family MarR_2 PF12802.7 CTQ26232.1 - 4.2e-09 36.2 0.0 7.9e-09 35.3 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 CTQ26232.1 - 2.2e-08 34.5 0.1 5e-08 33.3 0.0 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain Rrf2 PF02082.20 CTQ26232.1 - 0.0015 18.8 0.0 0.0032 17.8 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_34 PF13601.6 CTQ26232.1 - 0.0041 17.3 0.0 0.0072 16.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain GntR PF00392.21 CTQ26232.1 - 0.012 15.3 0.1 0.032 13.9 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 CTQ26232.1 - 0.016 14.8 0.0 0.033 13.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 CTQ26232.1 - 0.016 15.0 0.2 0.33 10.8 0.1 2.5 2 0 0 2 2 2 0 IclR helix-turn-helix domain DUF3037 PF11236.8 CTQ26232.1 - 0.13 12.7 0.4 4 7.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3037) HlyD_D23 PF16576.5 CTQ26233.1 - 4.8e-13 48.8 5.1 7.2e-06 25.4 0.5 3.1 1 1 1 3 3 3 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 CTQ26233.1 - 8.9e-11 41.5 0.8 8.9e-11 41.5 0.8 3.1 2 1 0 2 2 2 1 Biotin-lipoyl like HlyD_3 PF13437.6 CTQ26233.1 - 0.00026 21.6 2.1 0.13 12.9 0.2 3.1 2 2 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl PF00364.22 CTQ26233.1 - 0.0011 18.8 0.0 0.0043 16.9 0.0 2.0 2 0 0 2 2 2 1 Biotin-requiring enzyme HlyD PF00529.20 CTQ26233.1 - 0.002 17.9 0.0 0.0032 17.3 0.0 1.4 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS PCRF PF03462.18 CTQ26233.1 - 0.59 10.0 4.3 0.9 9.4 4.3 1.3 1 0 0 1 1 1 0 PCRF domain DUF2955 PF11168.8 CTQ26234.1 - 8.8e-39 132.5 22.7 8.8e-39 132.5 22.7 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF2955) DUF3343 PF11823.8 CTQ26235.1 - 4.1e-11 42.2 0.0 5.1e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3343) BcrAD_BadFG PF01869.20 CTQ26236.1 - 2.6e-66 223.9 0.7 3e-66 223.7 0.7 1.0 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family MreB_Mbl PF06723.13 CTQ26236.1 - 0.022 13.6 0.1 0.44 9.3 0.0 2.2 2 0 0 2 2 2 0 MreB/Mbl protein HGD-D PF06050.13 CTQ26237.1 - 1.9e-79 267.8 0.2 2.2e-79 267.6 0.2 1.0 1 0 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component LcrG PF07216.12 CTQ26237.1 - 0.011 15.6 0.2 6.3 6.8 0.0 3.3 3 0 0 3 3 3 0 LcrG protein DIMCO_N PF16844.5 CTQ26237.1 - 0.13 12.6 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor, N-terminal DUF2164 PF09932.9 CTQ26238.1 - 2.8e-22 78.5 0.6 3.4e-22 78.3 0.6 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2164) MFS_1 PF07690.16 CTQ26239.1 - 2.7e-32 112.1 38.4 2.7e-32 112.1 38.4 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ26239.1 - 7.9e-09 34.9 9.5 7.9e-09 34.9 9.5 2.3 2 1 0 2 2 2 1 Sugar (and other) transporter MFS_4 PF06779.14 CTQ26239.1 - 0.45 9.8 26.5 0.051 12.9 19.7 2.0 1 1 1 2 2 2 0 Uncharacterised MFS-type transporter YbfB DUF445 PF04286.12 CTQ26240.1 - 1.3e-109 367.5 1.0 1.4e-109 367.3 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF445) DUF3206 PF11472.8 CTQ26240.1 - 0.032 14.2 0.1 1.2 9.1 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3206) UPF0147 PF03685.13 CTQ26240.1 - 0.27 11.3 2.2 8.6 6.5 0.1 2.9 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0147) Se-cys_synth_N PF12390.8 CTQ26240.1 - 0.32 11.2 3.7 1.6 9.0 0.0 3.8 4 0 0 4 4 4 0 Selenocysteine synthase N terminal PSK_trans_fac PF07704.11 CTQ26240.1 - 5.8 7.8 6.2 29 5.5 0.1 3.0 3 0 0 3 3 3 0 Rv0623-like transcription factor LysE PF01810.18 CTQ26241.1 - 2.9e-22 79.1 15.8 3.4e-22 78.8 15.8 1.0 1 0 0 1 1 1 1 LysE type translocator AraC_binding PF02311.19 CTQ26242.1 - 3.1e-19 69.2 0.2 5.2e-19 68.5 0.2 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_18 PF12833.7 CTQ26242.1 - 5.5e-16 58.6 0.1 1.1e-15 57.6 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 CTQ26242.1 - 2.3e-08 33.6 0.0 6.2e-08 32.2 0.0 1.7 1 0 0 1 1 1 1 Cupin domain HTH_AraC PF00165.23 CTQ26242.1 - 2.7e-07 30.5 0.0 3.8e-05 23.7 0.0 2.4 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding_2 PF14525.6 CTQ26242.1 - 0.012 15.3 1.2 0.02 14.6 1.2 1.4 1 1 0 1 1 1 0 AraC-binding-like domain Cupin_4 PF08007.12 CTQ26242.1 - 0.051 13.0 0.1 0.12 11.9 0.1 1.6 1 0 0 1 1 1 0 Cupin superfamily protein Transposase_31 PF04754.12 CTQ26243.1 - 6.8e-89 296.9 0.0 8.7e-89 296.5 0.0 1.1 1 0 0 1 1 1 1 Putative transposase, YhgA-like DUF2802 PF10975.8 CTQ26243.1 - 0.0019 18.3 1.7 0.0038 17.3 1.7 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2802) LPD23 PF18838.1 CTQ26243.1 - 0.012 15.4 0.1 0.024 14.4 0.1 1.4 1 0 0 1 1 1 0 Large polyvalent protein associated domain 23 MRP_L53 PF10780.9 CTQ26243.1 - 0.046 13.9 0.1 0.13 12.4 0.1 1.8 1 0 0 1 1 1 0 39S ribosomal protein L53/MRP-L53 Aldedh PF00171.22 CTQ26244.1 - 1.1e-139 466.0 0.2 1.2e-139 465.8 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family YfaZ PF07437.11 CTQ26245.1 - 9.3e-45 152.5 4.8 1e-44 152.3 4.8 1.0 1 0 0 1 1 1 1 YfaZ precursor cobW PF02492.19 CTQ26246.1 - 6.2e-51 172.5 0.2 9.2e-51 171.9 0.2 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 CTQ26246.1 - 6.1e-19 67.7 0.0 1.1e-18 66.9 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 CTQ26246.1 - 0.00083 19.3 0.0 0.8 9.6 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase TsaE PF02367.17 CTQ26246.1 - 0.0029 17.6 0.1 0.006 16.6 0.1 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 CTQ26246.1 - 0.0079 16.4 0.1 0.25 11.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 CTQ26246.1 - 0.017 15.2 0.0 0.2 11.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 CTQ26246.1 - 0.018 15.3 0.0 0.039 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CTQ26246.1 - 0.024 15.2 0.2 0.087 13.4 0.1 2.1 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 CTQ26246.1 - 0.027 14.8 0.1 0.11 12.8 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 CTQ26246.1 - 0.027 15.0 0.0 0.054 14.0 0.0 1.6 1 1 0 1 1 1 0 ABC transporter Viral_helicase1 PF01443.18 CTQ26246.1 - 0.03 14.1 0.0 0.055 13.2 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase MobB PF03205.14 CTQ26246.1 - 0.035 14.0 0.0 0.068 13.1 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 CTQ26246.1 - 0.035 14.5 0.0 0.12 12.8 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 CTQ26246.1 - 0.052 13.6 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 CTQ26246.1 - 0.075 13.1 0.0 0.32 11.1 0.0 2.0 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain YAcAr PF10686.9 CTQ26246.1 - 0.098 12.6 0.3 0.95 9.5 0.0 2.6 2 1 1 3 3 3 0 YspA, cpYpsA-related SLOG family AAA_30 PF13604.6 CTQ26246.1 - 0.12 12.0 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 CTQ26246.1 - 0.13 12.1 0.0 0.3 10.9 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATPase_2 PF01637.18 CTQ26246.1 - 0.14 12.0 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Sel_put PF04328.13 CTQ26247.1 - 1.4e-27 95.5 0.4 1.5e-27 95.4 0.4 1.0 1 0 0 1 1 1 1 Selenoprotein, putative CstA PF02554.14 CTQ26248.1 - 5e-161 535.8 24.6 5e-161 535.8 24.6 2.0 2 1 0 2 2 2 1 Carbon starvation protein CstA CstA_5TM PF13722.6 CTQ26248.1 - 4e-34 117.5 4.6 4e-34 117.5 4.6 2.9 2 0 0 2 2 2 1 5TM C-terminal transporter carbon starvation CstA Peptidase_M56 PF05569.11 CTQ26248.1 - 2.2 7.4 9.5 0.57 9.3 3.8 2.3 2 0 0 2 2 2 0 BlaR1 peptidase M56 Flavin_Reduct PF01613.18 CTQ26251.1 - 1.9e-26 93.0 0.1 2.1e-26 92.8 0.1 1.0 1 0 0 1 1 1 1 Flavin reductase like domain HpaB_N PF11794.8 CTQ26252.1 - 9.8e-94 314.0 0.0 1.3e-93 313.6 0.0 1.1 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 CTQ26252.1 - 1.4e-64 216.9 0.0 2.1e-64 216.4 0.0 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal DUF4588 PF15251.6 CTQ26252.1 - 0.19 11.5 0.0 0.41 10.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4588) HTH_18 PF12833.7 CTQ26253.1 - 1.1e-19 70.5 0.8 1.1e-19 70.5 0.8 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ26253.1 - 9e-12 44.8 0.1 3e-07 30.4 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ26253.1 - 1.7e-08 34.1 0.2 3.1e-08 33.2 0.2 1.4 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 CTQ26253.1 - 1.3e-05 25.1 6.4 1.4e-05 25.1 4.0 2.2 2 1 0 2 2 2 1 AraC-like ligand binding domain Cupin_6 PF12852.7 CTQ26253.1 - 6.4e-05 22.8 1.3 0.0075 16.0 1.3 2.2 1 1 0 1 1 1 1 Cupin AraC_binding_2 PF14525.6 CTQ26253.1 - 0.0029 17.3 1.3 0.0052 16.5 1.3 1.4 1 0 0 1 1 1 1 AraC-binding-like domain tRNA-synt_2 PF00152.20 CTQ26253.1 - 0.13 11.3 0.0 0.18 10.9 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) MFS_1 PF07690.16 CTQ26254.1 - 4.5e-50 170.6 48.2 2.1e-49 168.3 36.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ26254.1 - 3.9e-06 26.4 27.9 1.3e-05 24.7 9.6 2.0 1 1 1 2 2 2 2 Uncharacterised MFS-type transporter YbfB ATG22 PF11700.8 CTQ26254.1 - 0.00043 19.0 0.4 0.00043 19.0 0.4 3.9 1 1 3 4 4 4 2 Vacuole effluxer Atg22 like HpcH_HpaI PF03328.14 CTQ26255.1 - 8.8e-68 227.7 0.0 1e-67 227.5 0.0 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 CTQ26255.1 - 0.11 11.3 0.0 0.17 10.7 0.0 1.2 1 0 0 1 1 1 0 Pyruvate kinase, barrel domain FAA_hydrolase PF01557.18 CTQ26256.1 - 7.1e-07 29.1 0.0 9.3e-07 28.7 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family CHMI PF02962.15 CTQ26257.1 - 2.5e-50 170.0 0.0 2.7e-50 169.8 0.0 1.0 1 0 0 1 1 1 1 5-carboxymethyl-2-hydroxymuconate isomerase LigB PF02900.18 CTQ26258.1 - 2.5e-84 282.6 0.0 2.9e-84 282.4 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase Aldedh PF00171.22 CTQ26259.1 - 1.6e-171 570.9 0.0 1.7e-171 570.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 CTQ26259.1 - 0.15 11.4 0.0 2.9 7.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) FAA_hydrolase PF01557.18 CTQ26260.1 - 8.1e-62 208.7 0.0 9.6e-62 208.5 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family FAA_hydrolase PF01557.18 CTQ26261.1 - 3.8e-41 141.2 0.0 4.4e-41 141.0 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family MarR PF01047.22 CTQ26263.1 - 3.6e-15 55.6 0.1 5.3e-15 55.1 0.1 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 CTQ26263.1 - 3.2e-06 26.9 0.1 6.8e-06 25.9 0.1 1.6 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 CTQ26263.1 - 0.0078 16.7 0.0 0.015 15.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain TetR_C_35 PF18556.1 CTQ26263.1 - 0.066 13.4 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Bacterial Tetracyclin repressor, C-terminal domain Ldh_2 PF02615.14 CTQ26265.1 - 2.2e-102 342.6 0.6 2.5e-102 342.4 0.6 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase Ala_racemase_N PF01168.20 CTQ26266.1 - 3e-16 59.7 0.1 4.4e-16 59.2 0.1 1.2 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain D-ser_dehydrat PF14031.6 CTQ26266.1 - 9.5e-15 55.0 0.0 1.8e-14 54.2 0.0 1.5 1 0 0 1 1 1 1 Putative serine dehydratase domain Histidinol_dh PF00815.20 CTQ26266.1 - 0.098 11.6 0.5 0.14 11.1 0.5 1.1 1 0 0 1 1 1 0 Histidinol dehydrogenase FAST_2 PF08368.12 CTQ26266.1 - 0.13 13.0 0.0 0.27 12.1 0.0 1.5 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 2 Amidohydro_3 PF07969.11 CTQ26267.1 - 2.5e-43 149.2 2.5 1e-40 140.7 2.5 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 CTQ26267.1 - 1.1e-07 31.5 0.1 0.015 14.6 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family Urease_alpha PF00449.20 CTQ26267.1 - 0.13 12.6 0.2 0.38 11.1 0.2 1.8 1 0 0 1 1 1 0 Urease alpha-subunit, N-terminal domain Ribonuc_L-PSP PF01042.21 CTQ26268.1 - 3.1e-23 82.1 0.0 3.9e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP SSF PF00474.17 CTQ26269.1 - 9.7e-41 140.0 40.9 1.3e-40 139.5 40.9 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family DGOK PF05035.12 CTQ26270.1 - 9.2e-97 323.4 0.8 1e-96 323.2 0.8 1.0 1 0 0 1 1 1 1 2-keto-3-deoxy-galactonokinase Aldolase PF01081.19 CTQ26271.1 - 4.4e-28 98.0 0.3 5.1e-28 97.8 0.3 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase TMP-TENI PF02581.17 CTQ26271.1 - 1.8e-05 24.2 0.2 0.0002 20.8 0.2 2.6 1 1 0 1 1 1 1 Thiamine monophosphate synthase DHO_dh PF01180.21 CTQ26271.1 - 0.044 13.0 0.3 0.93 8.6 0.0 2.4 2 1 1 3 3 3 0 Dihydroorotate dehydrogenase NMO PF03060.15 CTQ26271.1 - 0.098 12.0 2.6 2.4 7.4 2.6 2.0 1 1 0 1 1 1 0 Nitronate monooxygenase SIS PF01380.22 CTQ26272.1 - 3e-19 69.2 0.0 4.3e-19 68.7 0.0 1.2 1 0 0 1 1 1 1 SIS domain HTH_6 PF01418.17 CTQ26272.1 - 3.5e-15 55.7 0.1 6.2e-15 55.0 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family SIS_2 PF13580.6 CTQ26272.1 - 8.6e-08 32.3 0.8 0.00011 22.3 0.2 2.5 1 1 1 2 2 2 2 SIS domain HTH_IclR PF09339.10 CTQ26272.1 - 0.047 13.5 0.1 0.14 12.0 0.1 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR PF01047.22 CTQ26272.1 - 0.071 13.0 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 MarR family MarR_2 PF12802.7 CTQ26272.1 - 0.09 12.7 0.2 0.22 11.4 0.2 1.7 1 0 0 1 1 1 0 MarR family Acetyltransf_1 PF00583.25 CTQ26273.1 - 1.5e-14 54.2 0.0 2e-14 53.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ26273.1 - 5.2e-13 49.0 0.0 8.5e-13 48.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ26273.1 - 2.1e-10 40.9 0.0 3.2e-10 40.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ26273.1 - 1.6e-05 25.0 0.1 3.5e-05 23.9 0.1 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 CTQ26273.1 - 0.0022 18.2 0.4 0.0041 17.3 0.1 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ26273.1 - 0.0059 16.7 0.0 0.0093 16.1 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase DUF2156 PF09924.9 CTQ26273.1 - 0.012 14.6 0.0 0.013 14.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2156) Acetyltransf_4 PF13420.7 CTQ26273.1 - 0.012 15.7 0.0 0.014 15.5 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ26273.1 - 0.047 13.7 0.0 0.084 12.9 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein Clp_N PF02861.20 CTQ26273.1 - 0.049 13.8 0.1 0.19 11.9 0.1 2.0 2 0 0 2 2 2 0 Clp amino terminal domain, pathogenicity island component DUF1999 PF09390.10 CTQ26273.1 - 0.07 12.8 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) CSTF_C PF14304.6 CTQ26273.1 - 0.11 12.2 0.7 0.23 11.1 0.2 1.8 2 0 0 2 2 2 0 Transcription termination and cleavage factor C-terminal Acetyltransf_1 PF00583.25 CTQ26274.1 - 5.2e-20 71.8 0.0 3.2e-13 49.9 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ26274.1 - 1.5e-18 66.9 0.0 3e-11 43.4 0.0 2.1 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ26274.1 - 3.7e-16 59.3 0.0 1.7e-10 41.2 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ26274.1 - 3.1e-13 49.5 0.2 6.2e-09 35.7 0.1 2.3 2 0 0 2 2 2 2 FR47-like protein Acetyltransf_3 PF13302.7 CTQ26274.1 - 3.3e-06 27.8 0.1 0.00018 22.2 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ26274.1 - 4.9e-05 23.5 0.0 0.00063 19.9 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ26274.1 - 0.0001 22.4 0.4 0.32 11.2 0.0 2.7 2 1 1 3 3 3 2 GCN5-related N-acetyl-transferase PanZ PF12568.8 CTQ26274.1 - 0.00018 21.3 0.2 0.5 10.1 0.1 2.6 2 1 1 3 3 3 2 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 CTQ26274.1 - 0.0002 21.3 0.1 0.01 15.8 0.0 3.3 2 2 2 4 4 4 1 ESCO1/2 acetyl-transferase Acetyltransf_8 PF13523.6 CTQ26274.1 - 0.00021 21.0 0.1 0.00074 19.2 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ26274.1 - 0.0012 19.0 0.0 0.045 13.8 0.0 2.4 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 CTQ26274.1 - 0.017 14.6 0.0 0.88 9.0 0.0 2.3 2 0 0 2 2 2 0 Putative acetyl-transferase Acetyltransf_6 PF13480.7 CTQ26274.1 - 0.023 14.9 0.3 0.057 13.6 0.1 1.8 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Acetyltransf_18 PF18014.1 CTQ26274.1 - 0.13 12.1 0.0 7.3 6.5 0.0 2.3 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain MFS_1 PF07690.16 CTQ26275.1 - 1.7e-59 201.6 43.1 3.6e-57 193.9 37.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 CTQ26275.1 - 0.035 12.4 21.2 0.076 11.3 0.1 4.0 1 1 3 4 4 4 0 Organic Anion Transporter Polypeptide (OATP) family ADH_N PF08240.12 CTQ26278.1 - 6.6e-33 112.8 2.1 1.7e-32 111.5 2.1 1.7 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 CTQ26278.1 - 1.1e-19 70.7 0.0 1.9e-19 69.9 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 CTQ26278.1 - 8e-11 41.8 0.1 1.1e-10 41.4 0.1 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus AlaDh_PNT_C PF01262.21 CTQ26278.1 - 1.6e-06 27.6 0.3 2.4e-06 27.0 0.3 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ADH_zinc_N_2 PF13602.6 CTQ26278.1 - 7.9e-05 23.7 0.3 0.00026 22.0 0.2 1.8 1 1 0 1 1 1 1 Zinc-binding dehydrogenase 3HCDH_N PF02737.18 CTQ26278.1 - 0.0012 18.8 0.0 0.002 18.1 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 CTQ26278.1 - 0.0012 18.2 0.0 0.0022 17.4 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 CTQ26278.1 - 0.0048 17.0 0.5 0.023 14.8 0.1 2.0 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HI0933_like PF03486.14 CTQ26278.1 - 0.0088 14.8 0.7 0.012 14.3 0.7 1.2 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox_2 PF07992.14 CTQ26278.1 - 0.0089 15.3 0.1 0.014 14.6 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 CTQ26278.1 - 0.013 14.7 0.5 0.02 14.1 0.5 1.2 1 0 0 1 1 1 0 FAD binding domain Pyr_redox_3 PF13738.6 CTQ26278.1 - 0.014 14.7 0.8 0.026 13.8 0.8 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 CTQ26278.1 - 0.015 15.5 0.1 0.028 14.7 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 CTQ26278.1 - 0.02 15.0 0.1 0.037 14.1 0.1 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus XdhC_C PF13478.6 CTQ26278.1 - 0.027 15.0 0.4 0.15 12.5 0.4 2.0 1 1 0 1 1 1 0 XdhC Rossmann domain Pyr_redox PF00070.27 CTQ26278.1 - 0.032 14.8 0.1 0.064 13.8 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 CTQ26278.1 - 0.045 14.0 0.0 0.087 13.1 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_8 PF13450.6 CTQ26278.1 - 0.054 13.7 0.6 0.11 12.7 0.6 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 CTQ26278.1 - 0.054 12.6 2.2 0.084 11.9 2.2 1.3 1 0 0 1 1 1 0 FAD binding domain adh_short PF00106.25 CTQ26278.1 - 0.089 12.2 0.4 0.21 11.0 0.1 1.6 1 1 0 2 2 2 0 short chain dehydrogenase NAD_binding_7 PF13241.6 CTQ26278.1 - 0.09 13.2 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Egg_lysin PF01303.17 CTQ26278.1 - 0.11 12.7 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Egg lysin (Sperm-lysin) Shikimate_DH PF01488.20 CTQ26278.1 - 0.14 12.2 0.0 0.26 11.3 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Thi4 PF01946.17 CTQ26278.1 - 0.14 11.3 0.6 0.29 10.4 0.3 1.6 2 0 0 2 2 2 0 Thi4 family FAD_oxidored PF12831.7 CTQ26278.1 - 0.2 10.9 4.9 0.33 10.2 4.9 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase Mannitol_dh_C PF08125.13 CTQ26279.1 - 5.1e-66 222.6 0.0 6.8e-66 222.2 0.0 1.1 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 CTQ26279.1 - 1.9e-32 112.5 0.0 3.1e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain Sigma54_activat PF00158.26 CTQ26280.1 - 2.2e-48 164.1 0.0 7.3e-48 162.5 0.0 1.9 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 CTQ26280.1 - 4.3e-09 36.6 0.0 2.2e-08 34.3 0.0 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain PRD PF00874.20 CTQ26280.1 - 3.2e-08 33.7 0.2 6.3e-05 23.2 0.0 2.7 2 0 0 2 2 2 2 PRD domain AAA_22 PF13401.6 CTQ26280.1 - 7e-07 29.6 0.1 3.1e-05 24.3 0.0 3.5 3 1 0 3 3 3 1 AAA domain EIIA-man PF03610.16 CTQ26280.1 - 2.7e-06 27.6 0.2 5.6e-06 26.6 0.2 1.5 1 0 0 1 1 1 1 PTS system fructose IIA component AAA_5 PF07728.14 CTQ26280.1 - 5.6e-06 26.4 0.0 1.4e-05 25.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CTQ26280.1 - 0.0002 21.8 0.0 0.0046 17.4 0.0 2.9 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 CTQ26280.1 - 0.00025 21.5 0.0 0.0006 20.2 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 CTQ26280.1 - 0.00098 18.6 0.1 0.022 14.2 0.1 2.3 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 CTQ26280.1 - 0.016 14.9 0.0 0.038 13.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain UPF0122 PF04297.14 CTQ26280.1 - 0.034 14.4 0.0 0.11 12.8 0.0 1.8 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like MCM PF00493.23 CTQ26280.1 - 0.036 13.2 0.0 0.11 11.6 0.0 1.8 1 0 0 1 1 1 0 MCM P-loop domain RuvB_N PF05496.12 CTQ26280.1 - 0.059 13.1 0.0 0.18 11.5 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 CTQ26280.1 - 0.094 11.9 0.0 3.3 6.8 0.0 2.2 2 0 0 2 2 2 0 TIP49 P-loop domain MarR_2 PF12802.7 CTQ26280.1 - 0.12 12.3 0.2 0.9 9.5 0.0 2.5 3 0 0 3 3 3 0 MarR family AAA_29 PF13555.6 CTQ26280.1 - 0.18 11.6 0.0 0.6 9.9 0.0 1.9 2 0 0 2 2 2 0 P-loop containing region of AAA domain EIIA-man PF03610.16 CTQ26281.1 - 3.5e-15 56.2 0.0 4.7e-15 55.8 0.0 1.2 1 0 0 1 1 1 1 PTS system fructose IIA component RecR PF02132.15 CTQ26281.1 - 0.16 11.6 0.0 0.32 10.6 0.0 1.5 1 0 0 1 1 1 0 RecR protein PTSIIB_sorb PF03830.15 CTQ26282.1 - 4.4e-48 163.3 0.3 4.9e-48 163.1 0.3 1.0 1 0 0 1 1 1 1 PTS system sorbose subfamily IIB component EII-Sor PF03609.14 CTQ26283.1 - 3.9e-71 239.1 27.2 4.5e-71 239.0 27.2 1.0 1 0 0 1 1 1 1 PTS system sorbose-specific iic component PetG PF02529.15 CTQ26283.1 - 2.4 8.1 6.0 6.4 6.7 0.4 3.2 2 0 0 2 2 2 0 Cytochrome B6-F complex subunit 5 EIID-AGA PF03613.14 CTQ26284.1 - 1.1e-102 342.8 4.1 1.2e-102 342.6 4.1 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component SIS PF01380.22 CTQ26285.1 - 8.4e-18 64.5 0.0 6.3e-13 48.7 0.0 2.3 2 0 0 2 2 2 2 SIS domain SIS_2 PF13580.6 CTQ26285.1 - 0.00028 20.9 0.0 0.0012 18.8 0.0 2.0 2 0 0 2 2 2 1 SIS domain CbiA PF01656.23 CTQ26285.1 - 0.0025 17.8 0.0 0.0049 16.9 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain PK_C PF02887.16 CTQ26285.1 - 0.075 13.3 0.2 0.15 12.3 0.1 1.6 2 0 0 2 2 2 0 Pyruvate kinase, alpha/beta domain SIS PF01380.22 CTQ26286.1 - 1.8e-14 53.7 0.0 3.8e-11 43.0 0.0 2.3 2 0 0 2 2 2 2 SIS domain MR_MLE_C PF13378.6 CTQ26286.1 - 6.1e-05 22.7 0.1 9.7e-05 22.0 0.1 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like SIS_2 PF13580.6 CTQ26286.1 - 0.00026 21.0 0.3 0.001 19.1 0.1 2.1 2 1 1 3 3 3 1 SIS domain MinC_N PF05209.13 CTQ26286.1 - 0.04 13.9 0.0 0.072 13.1 0.0 1.3 1 0 0 1 1 1 0 Septum formation inhibitor MinC, N-terminal domain DUF2529 PF10740.9 CTQ26286.1 - 0.041 13.5 0.0 0.091 12.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) Transposase_31 PF04754.12 CTQ26287.1 - 1.7e-85 285.8 0.0 2.5e-85 285.2 0.0 1.2 1 0 0 1 1 1 1 Putative transposase, YhgA-like Yae1_N PF09811.9 CTQ26287.1 - 0.095 12.4 5.9 0.17 11.6 5.9 1.4 1 0 0 1 1 1 0 Essential protein Yae1, N terminal Sulfatase PF00884.23 CTQ26288.1 - 4.7e-22 78.8 0.1 7.3e-22 78.1 0.1 1.3 1 0 0 1 1 1 1 Sulfatase DUF4381 PF14316.6 CTQ26288.1 - 0.1 12.8 0.0 0.1 12.8 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) DUF4131 PF13567.6 CTQ26288.1 - 0.25 11.0 4.0 5.1 6.7 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DUF2501 PF10696.9 CTQ26289.1 - 1.7e-24 85.9 8.9 1.7e-24 85.9 8.9 1.7 2 1 0 2 2 2 1 Protein of unknown function (DUF2501) IstB_IS21 PF01695.17 CTQ26290.1 - 5.3e-18 65.4 0.0 7.1e-18 64.9 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 CTQ26290.1 - 1.4e-07 32.0 0.1 2.5e-07 31.2 0.1 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Bac_DnaA PF00308.18 CTQ26290.1 - 4.9e-06 26.5 0.0 6.3e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial dnaA protein ArsA_ATPase PF02374.15 CTQ26290.1 - 4.9e-05 22.7 0.0 8.7e-05 21.8 0.0 1.5 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.23 CTQ26290.1 - 0.0005 20.1 0.0 0.00084 19.4 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.6 CTQ26290.1 - 0.0014 18.4 0.0 0.0025 17.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain PIF1 PF05970.14 CTQ26290.1 - 0.002 17.4 0.4 0.32 10.1 0.0 2.1 1 1 1 2 2 2 2 PIF1-like helicase ResIII PF04851.15 CTQ26290.1 - 0.0046 17.0 0.0 0.0093 16.0 0.0 1.5 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit RuvB_N PF05496.12 CTQ26290.1 - 0.0062 16.3 0.3 0.017 14.9 0.3 1.7 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain RNA_helicase PF00910.22 CTQ26290.1 - 0.0067 16.8 0.1 0.024 15.0 0.1 1.9 1 1 0 1 1 1 1 RNA helicase NTPase_1 PF03266.15 CTQ26290.1 - 0.013 15.4 1.0 2.2 8.1 0.4 2.4 1 1 0 2 2 2 0 NTPase AAA_11 PF13086.6 CTQ26290.1 - 0.013 15.3 0.2 0.6 9.8 0.0 2.4 2 1 1 3 3 3 0 AAA domain PhoH PF02562.16 CTQ26290.1 - 0.015 14.8 0.0 0.024 14.1 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein Sigma54_activat PF00158.26 CTQ26290.1 - 0.027 14.2 0.0 0.052 13.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_5 PF07728.14 CTQ26290.1 - 0.028 14.4 0.2 0.08 12.9 0.1 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 CTQ26290.1 - 0.056 13.6 0.0 0.11 12.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain MeaB PF03308.16 CTQ26290.1 - 0.06 12.3 0.0 0.11 11.4 0.0 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Torsin PF06309.11 CTQ26290.1 - 0.065 13.3 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Torsin DnaT PF17948.1 CTQ26291.1 - 1.4e-25 88.7 0.9 2.5e-25 88.0 0.9 1.4 1 0 0 1 1 1 1 DnaT DNA-binding domain ThrE_2 PF12821.7 CTQ26292.1 - 9.7e-35 119.5 12.2 1.3e-34 119.1 12.2 1.2 1 0 0 1 1 1 1 Threonine/Serine exporter, ThrE ThrE PF06738.12 CTQ26292.1 - 0.00044 19.7 10.5 0.0005 19.5 10.5 1.2 1 0 0 1 1 1 1 Putative threonine/serine exporter ThrE PF06738.12 CTQ26293.1 - 1.5e-66 224.2 8.2 1.7e-66 224.1 8.2 1.0 1 0 0 1 1 1 1 Putative threonine/serine exporter ThrE_2 PF12821.7 CTQ26293.1 - 0.00026 21.1 12.2 0.00045 20.4 12.2 1.4 1 0 0 1 1 1 1 Threonine/Serine exporter, ThrE SpoIIIAC PF06686.11 CTQ26293.1 - 0.3 11.3 5.0 7 6.9 0.2 2.7 2 1 0 2 2 2 0 Stage III sporulation protein AC/AD protein family DUF1616 PF07760.11 CTQ26293.1 - 2.3 7.5 4.9 4.3 6.6 4.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) DUF2109 PF09882.9 CTQ26293.1 - 7.4 6.7 8.5 26 4.9 0.7 3.8 3 1 0 3 3 3 0 Predicted membrane protein (DUF2109) FAD_binding_3 PF01494.19 CTQ26294.1 - 5.6e-85 285.6 0.0 6.4e-85 285.5 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 CTQ26294.1 - 0.00054 20.1 0.0 0.0015 18.8 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 CTQ26294.1 - 0.0018 17.6 0.1 0.0031 16.8 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 CTQ26294.1 - 0.0038 16.5 0.1 0.0059 15.9 0.1 1.4 1 0 0 1 1 1 1 Thi4 family HI0933_like PF03486.14 CTQ26294.1 - 0.049 12.3 0.0 0.089 11.5 0.0 1.4 1 0 0 1 1 1 0 HI0933-like protein Pyr_redox_2 PF07992.14 CTQ26294.1 - 0.11 11.8 0.1 0.17 11.1 0.1 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase HTH_18 PF12833.7 CTQ26295.1 - 2.2e-18 66.3 1.1 2.2e-18 66.3 1.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ26295.1 - 3.8e-12 46.0 0.8 1.6e-07 31.2 0.5 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ26295.1 - 0.0042 16.8 0.0 0.016 14.9 0.1 1.9 2 0 0 2 2 2 1 Cupin domain AraC_binding_2 PF14525.6 CTQ26295.1 - 0.023 14.4 0.6 0.023 14.4 0.6 1.6 2 0 0 2 2 2 0 AraC-binding-like domain GerE PF00196.19 CTQ26296.1 - 1.5e-10 40.4 1.0 1.5e-10 40.4 1.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_38 PF13936.6 CTQ26296.1 - 1.5e-05 24.6 0.1 4.2e-05 23.2 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 CTQ26296.1 - 0.012 15.7 0.0 0.024 14.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix HTH_23 PF13384.6 CTQ26296.1 - 0.053 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain GerE PF00196.19 CTQ26297.1 - 5.5e-13 48.2 0.0 8.7e-13 47.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 CTQ26297.1 - 0.025 14.3 0.0 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Tnp_Tc3_1 PF11427.8 CTQ26297.1 - 0.038 13.8 0.0 0.17 11.7 0.0 2.1 2 0 0 2 2 2 0 Tc3 transposase Sigma70_r4 PF04545.16 CTQ26297.1 - 0.05 13.1 0.0 0.096 12.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 tRNA_edit PF04073.15 CTQ26298.1 - 1.4e-27 96.2 0.1 1.6e-27 96.0 0.1 1.0 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain PTS_EIIC PF02378.18 CTQ26299.1 - 2.1e-56 191.3 27.4 2.1e-56 191.3 27.4 1.4 2 0 0 2 2 2 1 Phosphotransferase system, EIIC FhuF PF06276.12 CTQ26300.1 - 1.6e-31 109.9 2.1 3.2e-31 108.9 2.1 1.5 1 0 0 1 1 1 1 Ferric iron reductase FhuF-like transporter FhuF_C PF11575.8 CTQ26300.1 - 1.3e-07 31.4 6.7 2.3e-07 30.6 6.7 1.4 1 0 0 1 1 1 1 FhuF 2Fe-2S C-terminal domain GGDEF PF00990.21 CTQ26301.1 - 5.5e-46 156.3 0.2 7.1e-46 155.9 0.2 1.1 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 CTQ26301.1 - 0.0017 18.6 0.0 0.0027 17.9 0.0 1.4 1 0 0 1 1 1 1 GGDEF-like domain DUF1435 PF07256.12 CTQ26302.1 - 7.6e-30 102.8 7.8 1.3e-29 102.1 7.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1435) MTS PF05175.14 CTQ26303.1 - 6.9e-61 204.7 0.0 1.1e-60 204.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MTS_N PF08468.11 CTQ26303.1 - 1.6e-56 190.7 0.0 4.1e-56 189.4 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase small domain N-terminal Methyltransf_25 PF13649.6 CTQ26303.1 - 2.8e-12 47.2 0.5 4.3e-11 43.4 0.1 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ26303.1 - 3.4e-11 43.2 0.0 5.6e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ26303.1 - 7.9e-09 36.2 0.1 2.9e-08 34.4 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ26303.1 - 3.2e-07 30.9 0.1 8.8e-07 29.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 CTQ26303.1 - 6.4e-07 29.1 0.0 9.2e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) NodS PF05401.11 CTQ26303.1 - 3.3e-06 26.8 0.0 5.5e-05 22.9 0.0 2.0 2 0 0 2 2 2 1 Nodulation protein S (NodS) Methyltransf_23 PF13489.6 CTQ26303.1 - 2.4e-05 24.2 0.0 9.6e-05 22.3 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_2 PF00891.18 CTQ26303.1 - 0.0006 19.2 0.0 0.00096 18.5 0.0 1.4 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_18 PF12847.7 CTQ26303.1 - 0.001 19.0 0.0 0.0018 18.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_10 PF05971.12 CTQ26303.1 - 0.0022 17.4 0.0 0.0066 15.8 0.0 1.5 1 1 0 1 1 1 1 RNA methyltransferase Cons_hypoth95 PF03602.15 CTQ26303.1 - 0.0054 16.4 0.0 0.0089 15.7 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Ubie_methyltran PF01209.18 CTQ26303.1 - 0.03 13.6 0.0 0.048 13.0 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.6 CTQ26303.1 - 0.034 14.1 0.0 0.056 13.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 CTQ26303.1 - 0.036 13.8 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GidB PF02527.15 CTQ26303.1 - 0.051 12.9 0.1 0.084 12.2 0.1 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_16 PF10294.9 CTQ26303.1 - 0.066 12.9 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase UPF0020 PF01170.18 CTQ26303.1 - 0.071 12.8 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 CMAS PF02353.20 CTQ26303.1 - 0.076 12.3 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase N6_Mtase PF02384.16 CTQ26303.1 - 0.14 11.4 0.0 3.1 7.0 0.0 2.3 3 0 0 3 3 3 0 N-6 DNA Methylase MetW PF07021.12 CTQ26303.1 - 0.16 11.5 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW DNA_III_psi PF03603.13 CTQ26304.1 - 4.2e-45 153.0 0.1 4.8e-45 152.9 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase III psi subunit CSTF_C PF14304.6 CTQ26304.1 - 0.00038 20.0 0.9 0.00071 19.1 0.3 1.8 2 0 0 2 2 2 1 Transcription termination and cleavage factor C-terminal Acetyltransf_1 PF00583.25 CTQ26305.1 - 7.9e-18 64.8 0.0 9.8e-18 64.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ26305.1 - 5.3e-13 49.0 0.0 6.1e-13 48.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ26305.1 - 2.9e-12 46.9 0.0 3.6e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ26305.1 - 1e-10 41.5 0.0 1.4e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 CTQ26305.1 - 6.7e-07 29.6 0.0 7.6e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 CTQ26305.1 - 3.4e-05 24.0 0.0 4.5e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 CTQ26305.1 - 4.6e-05 23.1 0.0 5.9e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_3 PF13302.7 CTQ26305.1 - 8.2e-05 23.3 0.1 0.00011 22.9 0.1 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 CTQ26305.1 - 0.00034 20.3 0.3 0.0012 18.5 0.3 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ26305.1 - 0.00048 20.2 0.0 0.00073 19.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ26305.1 - 0.00071 19.7 0.0 0.0012 18.9 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 CTQ26305.1 - 0.005 16.3 0.0 0.012 15.1 0.0 1.5 1 1 0 1 1 1 1 Putative acetyl-transferase PanZ PF12568.8 CTQ26305.1 - 0.074 12.8 0.2 0.1 12.3 0.2 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ HAD_2 PF13419.6 CTQ26306.1 - 1.6e-20 73.9 0.0 2.3e-20 73.4 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ26306.1 - 2.2e-15 57.5 0.0 6.5e-15 56.0 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ26306.1 - 6e-11 42.2 0.0 1.2e-10 41.3 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 CTQ26306.1 - 7.6e-06 26.4 0.0 1e-05 26.0 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase GTP_EFTU PF00009.27 CTQ26307.1 - 1.9e-46 158.1 0.0 3e-46 157.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain RF3_C PF16658.5 CTQ26307.1 - 2.3e-46 156.9 0.1 3.9e-46 156.1 0.1 1.4 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain GTP_EFTU_D2 PF03144.25 CTQ26307.1 - 5.8e-11 42.6 0.2 2.3e-10 40.7 0.2 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CTQ26307.1 - 0.00011 22.3 0.0 0.00021 21.3 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 CTQ26307.1 - 0.00026 21.0 0.0 0.0005 20.1 0.0 1.4 1 0 0 1 1 1 1 Elongation Factor G, domain II Ras PF00071.22 CTQ26307.1 - 0.049 13.2 0.0 0.095 12.3 0.0 1.4 1 0 0 1 1 1 0 Ras family Phg_2220_C PF09524.10 CTQ26307.1 - 0.053 13.6 0.1 0.12 12.4 0.1 1.5 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) LptE PF04390.12 CTQ26307.1 - 0.12 13.1 0.0 0.26 12.0 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide-assembly Roc PF08477.13 CTQ26307.1 - 0.14 12.3 0.0 0.48 10.7 0.0 1.9 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase BON PF04972.17 CTQ26308.1 - 7.1e-39 132.0 17.1 1.7e-19 69.9 5.0 2.5 2 0 0 2 2 2 2 BON domain MT0933_antitox PF14013.6 CTQ26308.1 - 0.00088 19.5 0.5 0.0027 18.0 0.5 1.8 1 0 0 1 1 1 1 MT0933-like antitoxin protein HMA PF00403.26 CTQ26308.1 - 0.028 14.9 1.2 0.028 14.9 1.2 3.5 1 1 3 4 4 4 0 Heavy-metal-associated domain Aerolysin PF01117.20 CTQ26308.1 - 0.28 10.4 3.8 0.28 10.3 3.0 1.3 1 1 0 1 1 1 0 Aerolysin toxin DUF1328 PF07043.13 CTQ26309.1 - 1.8e-13 50.4 23.6 2.1e-13 50.2 23.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1328) DUF3149 PF11346.8 CTQ26309.1 - 0.09 12.4 0.6 0.09 12.4 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) ThrE PF06738.12 CTQ26309.1 - 0.12 11.7 5.7 0.13 11.6 5.7 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter Pox_A14 PF05767.12 CTQ26309.1 - 0.34 11.1 4.1 0.45 10.7 4.1 1.2 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 IncE PF17627.2 CTQ26309.1 - 1.7 8.7 7.7 2 8.4 7.7 1.0 1 0 0 1 1 1 0 Inclusion membrane protein E FeoB_associated PF12669.7 CTQ26309.1 - 1.9 8.9 7.3 9.3 6.7 0.5 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein Phage_holin_3_6 PF07332.11 CTQ26309.1 - 2.9 8.0 12.1 3.9 7.5 12.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2721 PF11026.8 CTQ26309.1 - 3.8 7.4 7.7 4.7 7.1 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) DUF1676 PF07898.13 CTQ26309.1 - 9.2 6.3 5.6 10 6.1 5.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) Patatin PF01734.22 CTQ26310.1 - 5.1e-20 72.5 1.1 1e-18 68.2 1.1 2.3 1 1 0 1 1 1 1 Patatin-like phospholipase DUF1073 PF06381.11 CTQ26310.1 - 0.1 11.4 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1073) TatD_DNase PF01026.21 CTQ26311.1 - 8.4e-68 228.5 0.0 9.6e-68 228.3 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase TPR_14 PF13428.6 CTQ26311.1 - 2 9.4 9.1 1.5 9.8 0.1 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat Nucleos_tra2_C PF07662.13 CTQ26312.1 - 2.4e-80 269.3 5.9 2.4e-80 269.3 5.9 2.6 2 1 1 3 3 3 1 Na+ dependent nucleoside transporter C-terminus Nucleos_tra2_N PF01773.20 CTQ26312.1 - 1.4e-22 80.1 5.5 1.4e-22 80.1 5.5 3.7 4 1 0 4 4 4 1 Na+ dependent nucleoside transporter N-terminus Gate PF07670.14 CTQ26312.1 - 3.8e-08 33.6 14.9 5.4e-08 33.1 5.6 2.8 2 1 0 2 2 2 2 Nucleoside recognition Herpes_UL49_5 PF05702.11 CTQ26312.1 - 0.02 14.9 2.1 4.8 7.3 0.6 2.9 2 0 0 2 2 2 0 Herpesvirus UL49.5 envelope/tegument protein DeoC PF01791.9 CTQ26313.1 - 5.6e-52 176.7 0.5 6.4e-52 176.5 0.5 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase His_biosynth PF00977.21 CTQ26313.1 - 0.094 12.2 0.2 0.55 9.6 0.0 2.2 2 1 1 3 3 3 0 Histidine biosynthesis protein Glycos_transf_3 PF00591.21 CTQ26314.1 - 1.5e-53 182.0 1.3 2.5e-53 181.2 1.3 1.4 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain PYNP_C PF07831.13 CTQ26314.1 - 2.7e-25 87.8 0.2 5.1e-25 86.9 0.2 1.5 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_trans_3N PF02885.17 CTQ26314.1 - 3.9e-19 68.3 0.1 1.7e-18 66.2 0.1 2.2 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain LT-IIB PF06453.11 CTQ26314.1 - 0.097 12.6 0.0 0.27 11.1 0.0 1.7 1 0 0 1 1 1 0 Type II heat-labile enterotoxin , B subunit (LT-IIB) Metalloenzyme PF01676.18 CTQ26315.1 - 1.5e-37 129.3 0.0 2.2e-37 128.8 0.0 1.3 1 1 0 1 1 1 1 Metalloenzyme superfamily Bac_DNA_binding PF00216.21 CTQ26315.1 - 0.09 13.0 0.0 0.19 12.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial DNA-binding protein PNP_UDP_1 PF01048.20 CTQ26316.1 - 8.7e-41 139.7 1.8 1e-40 139.5 1.8 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Lip_prot_lig_C PF10437.9 CTQ26317.1 - 5.8e-19 67.9 0.0 4.1e-18 65.1 0.0 2.0 2 0 0 2 2 2 1 Bacterial lipoate protein ligase C-terminus BPL_LplA_LipB PF03099.19 CTQ26317.1 - 1.3e-08 34.8 0.0 2.4e-08 33.9 0.0 1.4 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family SMP_2 PF10144.9 CTQ26318.1 - 4.9e-65 218.0 0.1 7.4e-65 217.5 0.1 1.3 1 0 0 1 1 1 1 Bacterial virulence factor haemolysin CHASE8 PF17152.4 CTQ26318.1 - 0.0014 18.9 0.0 0.0027 17.9 0.0 1.6 1 1 0 1 1 1 1 Periplasmic sensor domain TetR_C_16 PF17920.1 CTQ26318.1 - 0.013 15.7 0.6 0.27 11.5 0.0 2.3 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Beta_protein PF14350.6 CTQ26318.1 - 0.058 12.8 0.0 0.08 12.3 0.0 1.2 1 0 0 1 1 1 0 Beta protein DUF4508 PF14969.6 CTQ26318.1 - 0.077 13.3 0.1 0.14 12.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) DUF412 PF04217.13 CTQ26318.1 - 0.093 12.6 0.4 0.18 11.7 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF412 DUF3290 PF11694.8 CTQ26318.1 - 0.13 12.2 0.3 0.39 10.7 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) DUF2157 PF09925.9 CTQ26318.1 - 0.23 11.3 2.1 2.7 7.8 0.3 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2157) LEAP-2 PF07359.11 CTQ26318.1 - 0.45 10.4 2.0 0.34 10.8 0.4 1.6 2 0 0 2 2 2 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) DUF5609 PF18429.1 CTQ26319.1 - 2.2e-21 75.4 0.0 4.9e-21 74.3 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5609) HAD PF12710.7 CTQ26319.1 - 3e-18 66.9 0.1 6.5e-18 65.8 0.1 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ26319.1 - 7.2e-18 65.6 0.9 1.6e-17 64.5 0.9 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 CTQ26319.1 - 1.7e-14 54.2 0.0 5.5e-13 49.2 0.1 2.2 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 CTQ26319.1 - 0.00025 20.5 0.0 0.0025 17.3 0.0 2.0 2 0 0 2 2 2 1 Putative Phosphatase S6PP PF05116.13 CTQ26319.1 - 0.0015 18.2 0.1 0.0038 16.8 0.0 1.6 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase HAD_2 PF13419.6 CTQ26319.1 - 0.023 14.8 0.0 0.15 12.1 0.0 2.0 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase BetR PF08667.10 CTQ26319.1 - 0.12 12.4 0.1 0.99 9.4 0.0 2.1 2 0 0 2 2 2 0 BetR domain ATPase PF06745.13 CTQ26320.1 - 3.8e-18 65.7 0.2 6.2e-11 42.1 0.1 2.2 1 1 1 2 2 2 2 KaiC AAA_25 PF13481.6 CTQ26320.1 - 7.9e-16 58.2 0.1 2e-15 56.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain Rubredoxin_2 PF18073.1 CTQ26320.1 - 1.5e-12 47.0 6.0 2.5e-12 46.3 6.0 1.4 1 0 0 1 1 1 1 Rubredoxin metal binding domain ChlI PF13541.6 CTQ26320.1 - 6.5e-10 38.9 0.1 1.5e-09 37.7 0.0 1.7 2 0 0 2 2 1 1 Subunit ChlI of Mg-chelatase Lon_C PF05362.13 CTQ26320.1 - 2.2e-08 33.9 0.1 5.4e-08 32.6 0.1 1.6 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain DnaB_C PF03796.15 CTQ26320.1 - 7e-08 32.1 0.2 0.00025 20.5 0.0 2.2 1 1 1 2 2 2 2 DnaB-like helicase C terminal domain Rad51 PF08423.11 CTQ26320.1 - 7e-07 28.8 0.4 0.00011 21.5 0.4 2.2 1 1 0 1 1 1 1 Rad51 RecA PF00154.21 CTQ26320.1 - 4e-05 23.2 0.1 6.3e-05 22.6 0.1 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_22 PF13401.6 CTQ26320.1 - 0.00033 20.9 0.0 0.00066 20.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 CTQ26320.1 - 0.0012 18.2 0.5 0.0033 16.7 0.5 1.7 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) GvpD PF07088.11 CTQ26320.1 - 0.0012 17.6 0.1 0.1 11.2 0.0 2.3 1 1 1 2 2 2 1 GvpD gas vesicle protein NTPase_1 PF03266.15 CTQ26320.1 - 0.0024 17.8 0.7 0.17 11.8 0.1 2.5 1 1 1 2 2 2 1 NTPase AAA_16 PF13191.6 CTQ26320.1 - 0.0027 18.1 0.2 0.0069 16.8 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 CTQ26320.1 - 0.0031 17.3 0.0 0.0051 16.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 CTQ26320.1 - 0.0037 17.7 0.1 0.0077 16.7 0.1 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) cobW PF02492.19 CTQ26320.1 - 0.01 15.5 0.0 0.017 14.7 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 CTQ26320.1 - 0.013 16.0 0.0 0.025 15.1 0.0 1.5 1 0 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 CTQ26320.1 - 0.013 14.8 0.2 0.025 13.9 0.2 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_14 PF13173.6 CTQ26320.1 - 0.013 15.5 0.0 0.023 14.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ26320.1 - 0.015 15.1 0.3 0.058 13.1 0.3 1.9 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 CTQ26320.1 - 0.055 12.5 0.2 0.19 10.8 0.0 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein PAXNEB PF05625.11 CTQ26320.1 - 0.074 12.2 0.2 0.12 11.5 0.2 1.2 1 0 0 1 1 1 0 PAXNEB protein AAA_29 PF13555.6 CTQ26320.1 - 0.1 12.4 0.7 0.23 11.2 0.7 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DZR PF12773.7 CTQ26320.1 - 0.11 12.5 1.5 0.17 11.9 0.7 1.7 2 0 0 2 2 2 0 Double zinc ribbon DUF1258 PF06869.12 CTQ26320.1 - 0.14 11.7 0.3 8.2 5.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1258) Herpes_Helicase PF02689.14 CTQ26320.1 - 0.17 9.7 0.0 0.27 9.1 0.0 1.2 1 0 0 1 1 1 0 Helicase XLF PF09302.11 CTQ26320.1 - 0.21 11.7 0.0 0.32 11.1 0.0 1.2 1 0 0 1 1 1 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component tRNA-synt_1f PF01921.18 CTQ26320.1 - 0.25 10.2 0.0 0.39 9.6 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (K) AAA_28 PF13521.6 CTQ26321.1 - 2.9e-27 95.9 0.0 4.4e-27 95.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain HTH_3 PF01381.22 CTQ26321.1 - 1e-09 38.3 0.1 3.6e-09 36.5 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 CTQ26321.1 - 5.3e-07 29.9 0.0 1.2e-06 28.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 CTQ26321.1 - 6.3e-07 29.3 0.1 5.6e-06 26.3 0.0 2.5 3 1 1 4 4 4 1 Helix-turn-helix domain HTH_26 PF13443.6 CTQ26321.1 - 0.00021 21.7 0.0 0.00043 20.7 0.0 1.5 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain CTP_transf_like PF01467.26 CTQ26321.1 - 0.00069 19.8 0.0 0.0068 16.6 0.0 2.3 2 0 0 2 2 2 1 Cytidylyltransferase-like Citrate_ly_lig PF08218.11 CTQ26321.1 - 0.0026 17.5 0.0 0.015 15.0 0.0 2.3 3 0 0 3 3 3 1 Citrate lyase ligase C-terminal domain ABC_tran PF00005.27 CTQ26321.1 - 0.0078 16.7 0.0 0.4 11.2 0.0 2.3 2 0 0 2 2 2 1 ABC transporter HTH_37 PF13744.6 CTQ26321.1 - 0.016 15.1 0.0 0.032 14.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain MMR_HSR1 PF01926.23 CTQ26321.1 - 0.022 14.9 0.0 0.039 14.0 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase HTH_35 PF13693.6 CTQ26321.1 - 0.038 14.0 0.0 0.074 13.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding AAA_29 PF13555.6 CTQ26321.1 - 0.087 12.6 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain FAD_syn PF06574.12 CTQ26321.1 - 0.14 12.0 0.0 0.71 9.7 0.0 2.1 2 0 0 2 2 2 0 FAD synthetase Dynamin_N PF00350.23 CTQ26321.1 - 0.21 11.6 0.4 0.4 10.7 0.4 1.4 1 0 0 1 1 1 0 Dynamin family ABC_tran PF00005.27 CTQ26322.1 - 1.4e-59 200.5 0.1 2.7e-32 112.1 0.0 2.9 3 0 0 3 3 3 2 ABC transporter AAA_21 PF13304.6 CTQ26322.1 - 2.3e-16 60.5 2.8 0.00016 21.6 0.0 4.3 3 1 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 CTQ26322.1 - 8.8e-14 51.3 8.1 2.1e-12 46.9 3.2 2.3 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 CTQ26322.1 - 5e-07 29.4 0.3 0.39 10.1 0.0 4.0 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 CTQ26322.1 - 6.2e-06 26.3 0.1 0.058 13.5 0.0 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_29 PF13555.6 CTQ26322.1 - 1.6e-05 24.6 0.9 0.024 14.4 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ26322.1 - 3.1e-05 24.6 8.0 0.0057 17.2 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CTQ26322.1 - 0.00012 22.4 0.2 0.058 13.7 0.0 3.0 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 CTQ26322.1 - 0.00031 20.7 0.2 0.081 12.8 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase SbcCD_C PF13558.6 CTQ26322.1 - 0.002 18.3 0.9 1.8 8.9 0.0 4.0 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_27 PF13514.6 CTQ26322.1 - 0.0021 17.7 0.4 0.41 10.2 0.0 2.8 3 0 0 3 3 3 1 AAA domain AAA_33 PF13671.6 CTQ26322.1 - 0.0022 18.1 0.2 1.4 9.1 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 CTQ26322.1 - 0.0026 18.2 7.5 2.7 8.3 0.0 3.7 2 1 1 3 3 3 1 AAA ATPase domain AAA_18 PF13238.6 CTQ26322.1 - 0.003 18.1 1.3 2.6 8.6 0.1 3.3 3 1 0 3 3 3 1 AAA domain MeaB PF03308.16 CTQ26322.1 - 0.0033 16.4 0.3 1.4 7.9 0.1 2.3 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_28 PF13521.6 CTQ26322.1 - 0.0066 16.7 0.9 0.58 10.4 0.0 2.9 3 0 0 3 3 2 1 AAA domain AAA_24 PF13479.6 CTQ26322.1 - 0.0076 16.0 0.2 1.4 8.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain Arf PF00025.21 CTQ26322.1 - 0.015 14.8 0.0 1.1 8.7 0.0 2.3 2 0 0 2 2 2 0 ADP-ribosylation factor family Roc PF08477.13 CTQ26322.1 - 0.018 15.3 1.0 1.3 9.2 0.0 2.8 3 0 0 3 3 2 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 CTQ26322.1 - 0.021 14.9 0.1 2.3 8.2 0.0 2.8 3 0 0 3 3 3 0 Dynamin family ATP-synt_ab PF00006.25 CTQ26322.1 - 0.038 13.7 0.2 0.22 11.1 0.0 2.0 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain cobW PF02492.19 CTQ26322.1 - 0.061 12.9 0.5 4 7.0 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.22 CTQ26322.1 - 0.061 12.5 1.1 2 7.5 0.0 2.8 3 0 0 3 3 3 0 NB-ARC domain AAA_25 PF13481.6 CTQ26322.1 - 0.071 12.7 0.3 15 5.1 0.0 3.6 4 0 0 4 4 4 0 AAA domain AAA_30 PF13604.6 CTQ26322.1 - 0.085 12.6 0.5 10 5.8 0.0 2.6 2 0 0 2 2 2 0 AAA domain DLIC PF05783.11 CTQ26322.1 - 0.13 11.1 0.1 6.9 5.4 0.0 2.1 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) AAA_14 PF13173.6 CTQ26322.1 - 0.14 12.2 0.1 7.3 6.6 0.0 3.0 3 0 0 3 3 3 0 AAA domain SRP54 PF00448.22 CTQ26322.1 - 0.21 11.2 0.3 8.7 5.9 0.0 2.4 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Jnk-SapK_ap_N PF09744.9 CTQ26322.1 - 0.35 11.1 11.2 1 9.5 0.1 2.2 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 AAA_13 PF13166.6 CTQ26322.1 - 0.35 9.4 6.6 2.8 6.4 0.0 2.9 3 1 0 3 3 2 0 AAA domain MRP-L46 PF11788.8 CTQ26322.1 - 1.2 9.9 4.5 0.32 11.7 0.9 1.8 2 0 0 2 2 1 0 39S mitochondrial ribosomal protein L46 AAA_15 PF13175.6 CTQ26322.1 - 1.2 8.8 4.4 6.6 6.3 0.0 3.3 5 0 0 5 5 4 0 AAA ATPase domain SLT PF01464.20 CTQ26323.1 - 2.3e-33 114.3 0.1 4.2e-33 113.5 0.1 1.5 1 0 0 1 1 1 1 Transglycosylase SLT domain SLT_L PF14718.6 CTQ26323.1 - 2.8e-23 81.8 6.3 2.8e-23 81.8 6.3 3.4 2 1 0 2 2 2 1 Soluble lytic murein transglycosylase L domain Cucumo_coat PF00760.18 CTQ26323.1 - 0.00052 19.7 0.0 0.0019 17.9 0.0 1.9 1 1 0 1 1 1 1 Cucumovirus coat protein TPR_19 PF14559.6 CTQ26323.1 - 0.0014 19.1 2.7 0.043 14.3 0.3 3.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 CTQ26323.1 - 0.24 12.1 1.9 1.2 9.9 1.9 2.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Trp_repressor PF01371.19 CTQ26324.1 - 1.9e-28 98.4 0.1 2.2e-28 98.2 0.1 1.1 1 0 0 1 1 1 1 Trp repressor protein HTH_5 PF01022.20 CTQ26324.1 - 0.09 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family NTPase_I-T PF01931.18 CTQ26325.1 - 1.9e-52 177.4 0.0 2.1e-52 177.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF84 Phage_tube PF04985.14 CTQ26325.1 - 0.059 13.1 0.0 0.089 12.5 0.0 1.2 1 0 0 1 1 1 0 Phage tail tube protein FII His_Phos_1 PF00300.22 CTQ26326.1 - 1.6e-56 191.1 1.5 1.8e-56 190.9 1.5 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) HTH_18 PF12833.7 CTQ26327.1 - 1.3e-19 70.3 2.1 2.5e-19 69.3 2.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain GyrI-like PF06445.15 CTQ26327.1 - 1.2e-18 67.9 0.0 1.6e-18 67.5 0.0 1.1 1 0 0 1 1 1 1 GyrI-like small molecule binding domain HTH_AraC PF00165.23 CTQ26327.1 - 4.6e-15 55.3 0.1 1.7e-08 34.3 0.2 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cass2 PF14526.6 CTQ26327.1 - 2.1e-09 37.7 0.0 2.8e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 Integron-associated effector binding protein CreA PF05981.12 CTQ26328.1 - 2.5e-59 199.0 0.0 2.8e-59 198.8 0.0 1.0 1 0 0 1 1 1 1 CreA protein Response_reg PF00072.24 CTQ26329.1 - 4.4e-26 91.3 0.0 6.4e-26 90.7 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ26329.1 - 2e-23 82.3 0.0 3.5e-23 81.5 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal HTH_11 PF08279.12 CTQ26329.1 - 0.0033 17.3 0.0 0.064 13.2 0.0 2.8 3 0 0 3 3 3 1 HTH domain FleQ PF06490.11 CTQ26329.1 - 0.061 13.7 0.0 0.52 10.7 0.0 2.0 2 0 0 2 2 2 0 Flagellar regulatory protein FleQ HATPase_c PF02518.26 CTQ26330.1 - 1e-21 77.5 0.0 1.7e-21 76.8 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ26330.1 - 3.6e-12 46.1 0.3 1.2e-11 44.4 0.3 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain dCache_1 PF02743.18 CTQ26330.1 - 1.3e-07 31.7 0.0 3.9e-07 30.1 0.0 1.7 2 0 0 2 2 2 1 Cache domain dCache_3 PF14827.6 CTQ26330.1 - 2e-06 27.6 0.0 3.5e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Double sensory domain of two-component sensor kinase sCache_3_2 PF17203.4 CTQ26330.1 - 0.00014 22.0 0.2 0.00037 20.6 0.2 1.7 1 1 0 1 1 1 1 Single cache domain 3 HAMP PF00672.25 CTQ26330.1 - 0.00025 21.4 2.1 0.0012 19.2 0.0 3.1 4 0 0 4 4 4 1 HAMP domain HATPase_c_5 PF14501.6 CTQ26330.1 - 0.0003 20.7 0.0 0.00063 19.6 0.0 1.4 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.6 CTQ26330.1 - 0.0016 18.3 0.0 0.0027 17.5 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.6 CTQ26330.1 - 0.016 15.5 0.0 0.042 14.1 0.0 1.8 1 0 0 1 1 1 0 GAF domain ACP_PD PF04336.12 CTQ26330.1 - 0.024 15.1 1.9 4.2 7.9 0.0 3.2 3 0 0 3 3 3 0 Acyl carrier protein phosphodiesterase GAF PF01590.26 CTQ26330.1 - 0.039 14.6 0.0 0.11 13.1 0.0 1.8 1 0 0 1 1 1 0 GAF domain sCache_like PF16736.5 CTQ26330.1 - 0.073 13.2 0.0 0.5 10.5 0.0 2.1 2 0 0 2 2 2 0 Single Cache-like CreD PF06123.12 CTQ26331.1 - 2.7e-138 461.4 0.0 3.1e-138 461.2 0.0 1.0 1 0 0 1 1 1 1 Inner membrane protein CreD Response_reg PF00072.24 CTQ26332.1 - 1.4e-27 96.0 0.4 4.6e-27 94.4 0.2 1.8 2 0 0 2 2 2 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ26332.1 - 1.4e-18 66.8 0.0 2.7e-18 65.8 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal SpoU_methylase PF00588.19 CTQ26333.1 - 1.2e-32 113.0 0.0 1.9e-32 112.4 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family Homoserine_dh PF00742.19 CTQ26334.1 - 1.6e-47 161.6 0.0 6.9e-47 159.6 0.0 2.1 2 0 0 2 2 2 1 Homoserine dehydrogenase AA_kinase PF00696.28 CTQ26334.1 - 4.9e-46 157.3 0.6 1.9e-45 155.4 0.1 2.1 2 0 0 2 2 2 1 Amino acid kinase family NAD_binding_3 PF03447.16 CTQ26334.1 - 7.9e-32 110.4 0.0 2.7e-31 108.7 0.0 2.0 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ACT_7 PF13840.6 CTQ26334.1 - 7.8e-19 67.2 1.2 1.4e-08 34.4 0.4 2.7 2 0 0 2 2 2 2 ACT domain ACT PF01842.25 CTQ26334.1 - 2.3e-18 65.6 0.2 1.1e-08 34.6 0.0 2.9 2 0 0 2 2 2 2 ACT domain GHMP_kinases_N PF00288.26 CTQ26335.1 - 3.6e-15 56.0 0.2 7.6e-15 54.9 0.2 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 CTQ26335.1 - 1.5e-10 41.3 0.9 4e-10 39.9 0.0 2.2 2 0 0 2 2 2 1 GHMP kinases C terminal PALP PF00291.25 CTQ26336.1 - 1.6e-23 83.6 0.0 2.3e-23 83.1 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Thr_synth_N PF14821.6 CTQ26336.1 - 4.7e-13 49.1 0.0 1.8e-12 47.3 0.0 2.0 2 0 0 2 2 2 1 Threonine synthase N terminus SmpA_OmlA PF04355.13 CTQ26337.1 - 0.0012 18.6 0.4 0.0069 16.2 0.4 2.0 1 1 0 1 1 1 1 SmpA / OmlA family LPAM_1 PF08139.12 CTQ26337.1 - 0.027 14.9 1.7 0.059 13.9 1.7 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site H2O2_YaaD PF03883.14 CTQ26338.1 - 2.7e-91 305.2 0.0 3.1e-91 305.0 0.0 1.0 1 0 0 1 1 1 1 Peroxide stress protein YaaA Na_Ala_symp PF01235.17 CTQ26339.1 - 2.2e-141 471.7 19.8 2.6e-141 471.5 19.8 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family TAL_FSA PF00923.19 CTQ26340.1 - 6e-102 340.8 0.1 6.8e-102 340.7 0.1 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase MoCF_biosynth PF00994.24 CTQ26341.1 - 6.8e-28 97.1 0.0 8.7e-28 96.8 0.0 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain MFS_1 PF07690.16 CTQ26342.1 - 2.6e-26 92.4 45.5 2.6e-26 92.4 45.5 2.5 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ26342.1 - 9.2e-20 70.9 31.0 2.7e-19 69.4 6.2 2.3 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.6 CTQ26342.1 - 0.18 10.3 26.2 0.0059 15.2 16.4 2.2 2 0 0 2 2 2 0 MFS/sugar transport protein Gpr1_Fun34_YaaH PF01184.19 CTQ26343.1 - 1.3e-42 145.7 20.2 1.5e-42 145.6 20.2 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Ubiq_cyt_C_chap PF03981.12 CTQ26344.1 - 1.2e-19 70.8 0.1 1.7e-19 70.3 0.1 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C chaperone DUF3944 PF13099.6 CTQ26344.1 - 4.9e-17 61.5 0.4 9.4e-17 60.6 0.1 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF3944) Sdh5 PF03937.16 CTQ26344.1 - 0.12 12.4 0.1 1.5 8.8 0.1 2.2 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase DUF2541 PF10807.8 CTQ26345.1 - 2.1e-71 238.1 0.3 2.3e-71 237.9 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2541) HSP70 PF00012.20 CTQ26346.1 - 3e-268 891.0 16.2 3.6e-268 890.7 16.2 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 CTQ26346.1 - 1.1e-14 54.0 3.1 1.3e-12 47.2 0.7 2.6 2 1 0 2 2 2 2 MreB/Mbl protein FGGY_C PF02782.16 CTQ26346.1 - 0.0019 17.9 0.0 0.0051 16.6 0.0 1.7 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FtsA PF14450.6 CTQ26346.1 - 0.41 11.1 10.1 1.7 9.1 0.2 3.9 3 2 0 3 3 3 0 Cell division protein FtsA Lant_dehydr_C PF14028.6 CTQ26346.1 - 2.5 7.6 5.4 0.88 9.0 2.7 1.5 2 0 0 2 2 2 0 Lantibiotic biosynthesis dehydratase C-term FUSC PF04632.12 CTQ26346.1 - 7.4 5.0 6.1 11 4.4 6.1 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family FKBP_N PF01346.18 CTQ26346.1 - 9.7 7.2 17.3 2.9 8.9 8.6 3.1 1 1 1 2 2 2 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DnaJ_C PF01556.18 CTQ26347.1 - 2.4e-46 157.5 0.0 3.1e-46 157.1 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 CTQ26347.1 - 8.1e-29 99.5 4.7 1.2e-28 98.9 4.7 1.3 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 CTQ26347.1 - 9.1e-16 58.0 17.0 1.7e-15 57.1 17.0 1.5 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 CTQ26347.1 - 1.1e-05 25.3 14.5 0.00041 20.2 3.0 3.1 1 1 3 4 4 4 4 Tryptophan RNA-binding attenuator protein inhibitory protein Cytochrome_C7 PF14522.6 CTQ26347.1 - 5e-05 23.2 3.2 0.003 17.5 0.1 2.6 2 0 0 2 2 2 1 Cytochrome c7 and related cytochrome c DUF5351 PF17302.2 CTQ26347.1 - 0.065 13.4 17.1 1.6 9.0 0.4 4.6 4 0 0 4 4 4 0 Family of unknown function (DUF5351) RRM_3 PF08777.11 CTQ26347.1 - 0.1 12.7 0.5 0.2 11.7 0.5 1.4 1 0 0 1 1 1 0 RNA binding motif TackOD1 PF18551.1 CTQ26347.1 - 0.36 10.5 6.1 0.53 9.9 0.9 2.3 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 HypA PF01155.19 CTQ26347.1 - 0.42 10.7 10.3 0.99 9.4 1.3 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_9 PF14369.6 CTQ26347.1 - 0.72 10.2 7.2 12 6.2 0.1 3.4 3 0 0 3 3 3 0 zinc-ribbon Cytochrom_c3_2 PF14537.6 CTQ26347.1 - 0.96 10.0 11.1 3.5 8.2 11.1 2.0 1 1 0 1 1 1 0 Cytochrome c3 Lar_restr_allev PF14354.6 CTQ26347.1 - 1.1 9.7 13.3 6 7.3 3.6 4.2 1 1 3 4 4 4 0 Restriction alleviation protein Lar Na_H_antiport_1 PF06965.12 CTQ26348.1 - 2.9e-150 500.3 34.2 3.3e-150 500.1 34.2 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 HTH_1 PF00126.27 CTQ26349.1 - 8.4e-16 57.7 0.0 1.6e-15 56.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 CTQ26349.1 - 1.2e-10 41.1 0.0 1.7e-10 40.6 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 CTQ26349.1 - 0.079 12.8 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Ribosomal_S20p PF01649.18 CTQ26350.1 - 1.8e-27 95.8 16.1 2e-27 95.6 16.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S20 ABC_tran_Xtn PF12848.7 CTQ26350.1 - 5.3 7.1 11.3 2.1 8.5 4.2 2.0 1 1 1 2 2 2 0 ABC transporter Rad21_Rec8_N PF04825.13 CTQ26351.1 - 0.019 15.1 0.0 0.027 14.6 0.0 1.2 1 0 0 1 1 1 0 N terminus of Rad21 / Rec8 like protein FAD_syn PF06574.12 CTQ26352.1 - 1.4e-58 197.2 0.0 1.9e-58 196.8 0.0 1.2 1 0 0 1 1 1 1 FAD synthetase Flavokinase PF01687.17 CTQ26352.1 - 1.6e-38 131.4 0.0 2.5e-38 130.8 0.0 1.3 1 0 0 1 1 1 1 Riboflavin kinase CTP_transf_like PF01467.26 CTQ26352.1 - 0.00013 22.2 0.0 0.00041 20.6 0.0 2.0 1 1 0 1 1 1 1 Cytidylyltransferase-like tRNA-synt_1 PF00133.22 CTQ26353.1 - 4.2e-229 761.8 0.0 5e-229 761.5 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 CTQ26353.1 - 3.2e-29 101.8 0.0 5.4e-29 101.1 0.0 1.3 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 CTQ26353.1 - 2e-19 69.6 0.1 3.1e-10 39.4 0.0 3.5 3 1 0 3 3 3 3 tRNA synthetases class I (M) zf-FPG_IleRS PF06827.14 CTQ26353.1 - 2.1e-09 37.0 3.1 2.1e-09 37.0 3.1 1.9 2 0 0 2 2 2 1 Zinc finger found in FPG and IleRS tRNA-synt_1e PF01406.19 CTQ26353.1 - 1e-08 34.9 0.0 3.1e-06 26.8 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 CTQ26353.1 - 2.5e-06 26.7 0.1 1.3e-05 24.3 0.0 2.1 3 0 0 3 3 3 1 tRNA synthetases class I (K) tRNA-synt_1_2 PF13603.6 CTQ26353.1 - 7e-05 22.4 0.0 0.00013 21.6 0.0 1.3 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 PAPS_reduct PF01507.19 CTQ26353.1 - 0.13 12.3 0.0 17 5.4 0.0 2.4 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family Peptidase_A8 PF01252.18 CTQ26354.1 - 1.3e-37 129.1 7.8 1.5e-37 129.0 7.8 1.0 1 0 0 1 1 1 1 Signal peptidase (SPase) II NEMP PF10225.9 CTQ26354.1 - 0.011 15.4 0.2 0.017 14.8 0.2 1.4 1 0 0 1 1 1 0 NEMP family MscL PF01741.18 CTQ26354.1 - 0.087 13.1 0.1 0.18 12.1 0.0 1.5 1 1 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL ThrE PF06738.12 CTQ26354.1 - 0.58 9.5 5.0 0.56 9.5 4.0 1.5 1 1 0 1 1 1 0 Putative threonine/serine exporter CbtB PF09489.10 CTQ26354.1 - 1.6 8.9 4.2 11 6.2 0.0 3.5 3 1 1 4 4 4 0 Probable cobalt transporter subunit (CbtB) FKBP_C PF00254.28 CTQ26355.1 - 4.9e-15 55.6 0.0 7e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase LYTB PF02401.18 CTQ26356.1 - 9.5e-92 307.0 0.0 1.1e-91 306.8 0.0 1.0 1 0 0 1 1 1 1 LytB protein TPP_enzyme_M PF00205.22 CTQ26356.1 - 0.1 12.3 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Glyco_hydro_3_C PF01915.22 CTQ26356.1 - 0.13 12.2 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain IU_nuc_hydro PF01156.19 CTQ26357.1 - 1.2e-82 277.9 0.2 1.4e-82 277.7 0.2 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase DUF805 PF05656.14 CTQ26358.1 - 1.1e-21 77.1 3.8 1.3e-21 77.0 3.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF805) Hexose_dehydrat PF03559.14 CTQ26358.1 - 0.18 11.2 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 NDP-hexose 2,3-dehydratase LysR_substrate PF03466.20 CTQ26359.1 - 3.5e-40 137.6 0.6 5.3e-40 137.0 0.6 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26359.1 - 3.8e-19 68.4 0.1 6.9e-19 67.6 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ26359.1 - 0.0077 16.1 0.1 0.019 14.8 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_Tnp_ISL3 PF13542.6 CTQ26359.1 - 0.011 15.2 0.9 0.036 13.5 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_28 PF13518.6 CTQ26359.1 - 0.027 14.6 0.1 0.11 12.7 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 CTQ26359.1 - 0.097 12.3 0.0 0.19 11.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding tRNA_SAD PF07973.14 CTQ26360.1 - 0.00023 21.2 0.0 0.00038 20.5 0.0 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain tRNA-synt_2c PF01411.19 CTQ26360.1 - 0.00037 19.1 0.0 0.00047 18.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) T2SSN PF01203.19 CTQ26360.1 - 0.0053 17.0 0.2 0.011 16.0 0.1 1.6 1 1 0 1 1 1 1 Type II secretion system (T2SS), protein N Response_reg PF00072.24 CTQ26361.1 - 1.1e-19 70.7 0.1 1.8e-19 69.9 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain CitT PF12431.8 CTQ26361.1 - 4.1e-06 27.0 0.0 4.1e-06 27.0 0.0 2.2 2 0 0 2 2 2 1 Transcriptional regulator HTH_IclR PF09339.10 CTQ26361.1 - 0.037 13.8 0.1 0.15 11.9 0.0 2.0 2 0 0 2 2 2 0 IclR helix-turn-helix domain PSK_trans_fac PF07704.11 CTQ26361.1 - 0.097 13.4 0.2 1.9 9.3 0.0 2.4 2 0 0 2 2 2 0 Rv0623-like transcription factor HTH_29 PF13551.6 CTQ26361.1 - 0.1 12.6 0.0 14 5.8 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn helix sCache_3_2 PF17203.4 CTQ26362.1 - 2e-21 76.6 0.3 6.2e-21 75.0 0.2 1.8 2 0 0 2 2 2 1 Single cache domain 3 HATPase_c PF02518.26 CTQ26362.1 - 4.9e-15 56.0 0.0 9.1e-15 55.1 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 CTQ26362.1 - 3.4e-12 46.1 0.1 2.4e-11 43.4 0.0 2.4 3 0 0 3 3 3 1 GHKL domain dCache_1 PF02743.18 CTQ26362.1 - 4e-05 23.5 6.1 0.00067 19.5 0.1 3.5 3 0 0 3 3 3 1 Cache domain SPOB_a PF14689.6 CTQ26362.1 - 0.0001 21.9 2.9 0.00027 20.6 2.9 1.6 1 0 0 1 1 1 1 Sensor_kinase_SpoOB-type, alpha-helical domain dCache_3 PF14827.6 CTQ26362.1 - 0.00023 20.9 0.0 0.00052 19.7 0.0 1.5 1 0 0 1 1 1 1 Double sensory domain of two-component sensor kinase HATPase_c_2 PF13581.6 CTQ26362.1 - 0.0023 17.9 0.0 0.0047 16.9 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.10 CTQ26362.1 - 0.0043 17.3 0.0 0.53 10.6 0.0 2.8 2 0 0 2 2 2 1 PAS fold PAS PF00989.25 CTQ26362.1 - 0.0074 16.3 0.1 0.037 14.0 0.0 2.2 3 0 0 3 3 2 1 PAS fold PAS_8 PF13188.7 CTQ26362.1 - 0.0078 16.2 0.0 0.022 14.8 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 CTQ26362.1 - 0.014 15.7 0.4 0.065 13.5 0.0 2.4 3 0 0 3 3 3 0 PAS domain PAS_7 PF12860.7 CTQ26362.1 - 0.019 15.1 0.1 0.056 13.6 0.0 1.9 2 0 0 2 2 1 0 PAS fold Cache_3-Cache_2 PF17201.4 CTQ26362.1 - 0.024 13.9 0.0 0.072 12.4 0.0 1.8 1 0 0 1 1 1 0 Cache 3/Cache 2 fusion domain sCache_3_3 PF17202.4 CTQ26362.1 - 0.048 14.1 0.0 0.13 12.7 0.0 1.7 1 0 0 1 1 1 0 Single cache domain 3 OAD_beta PF03977.13 CTQ26363.1 - 2.3e-08 33.5 1.8 2.4e-08 33.4 1.8 1.0 1 0 0 1 1 1 1 Na+-transporting oxaloacetate decarboxylase beta subunit 2HCT PF03390.15 CTQ26364.1 - 1.9e-146 488.0 37.2 2.1e-146 487.8 37.2 1.0 1 0 0 1 1 1 1 2-hydroxycarboxylate transporter family Citrate_ly_lig PF08218.11 CTQ26365.1 - 1.2e-82 276.0 0.0 1.6e-82 275.6 0.0 1.1 1 0 0 1 1 1 1 Citrate lyase ligase C-terminal domain Acetyltransf_10 PF13673.7 CTQ26365.1 - 4.4e-05 23.4 0.0 9.3e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ26365.1 - 6.3e-05 23.2 0.0 0.00025 21.3 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ26365.1 - 0.0059 17.0 0.0 0.019 15.4 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain HIGH_NTase1 PF05636.11 CTQ26365.1 - 0.038 13.2 0.0 4.6 6.4 0.0 2.1 2 0 0 2 2 2 0 HIGH Nucleotidyl Transferase ACP PF06857.11 CTQ26366.1 - 4.1e-29 100.6 1.7 4.8e-29 100.4 1.7 1.1 1 0 0 1 1 1 1 Malonate decarboxylase delta subunit (MdcD) HpcH_HpaI PF03328.14 CTQ26367.1 - 3.1e-77 258.6 1.6 3.1e-77 258.6 0.5 1.5 2 0 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 CTQ26367.1 - 2.3e-09 36.9 0.2 3.5e-06 26.4 0.0 2.3 2 1 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold CitF PF04223.12 CTQ26368.1 - 8.1e-248 822.9 1.2 9.3e-248 822.7 1.2 1.0 1 0 0 1 1 1 1 Citrate lyase, alpha subunit (CitF) AcetylCoA_hyd_C PF13336.6 CTQ26368.1 - 0.0032 17.4 0.1 0.0062 16.5 0.1 1.4 1 0 0 1 1 1 1 Acetyl-CoA hydrolase/transferase C-terminal domain CitG PF01874.16 CTQ26369.1 - 9.5e-84 281.4 0.8 1.1e-83 281.2 0.8 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase DapB_C PF05173.14 CTQ26370.1 - 4.1e-43 146.2 0.1 5.8e-43 145.8 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 CTQ26370.1 - 1.8e-42 144.3 1.0 5.3e-42 142.8 0.2 2.0 2 1 1 3 3 3 1 Dihydrodipicolinate reductase, N-terminus CPSase_sm_chain PF00988.22 CTQ26371.1 - 6.8e-53 177.9 0.1 1.1e-52 177.2 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 CTQ26371.1 - 5.5e-50 169.8 0.0 9.6e-50 169.0 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 CTQ26371.1 - 1.2e-07 31.7 0.0 1e-05 25.4 0.0 2.3 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 CTQ26371.1 - 0.0081 16.0 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 DJ-1/PfpI family Ish1 PF10281.9 CTQ26371.1 - 0.18 12.2 0.0 0.41 11.0 0.0 1.6 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein CPSase_L_D2 PF02786.17 CTQ26372.1 - 1.9e-118 393.5 1.9 4e-77 258.5 0.0 2.4 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 CTQ26372.1 - 3.9e-40 137.0 0.0 1.1e-39 135.6 0.0 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 CTQ26372.1 - 8.5e-19 67.5 0.1 4.7e-18 65.2 0.0 2.4 2 0 0 2 2 2 1 MGS-like domain ATP-grasp PF02222.22 CTQ26372.1 - 2e-15 56.8 0.3 9.5e-08 31.8 0.2 2.3 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_3 PF02655.14 CTQ26372.1 - 2.3e-12 47.3 0.4 1.2e-08 35.1 0.0 2.7 2 0 0 2 2 2 2 ATP-grasp domain ATPgrasp_Ter PF15632.6 CTQ26372.1 - 7.1e-12 45.2 0.9 1.8e-07 31.0 0.0 3.3 3 0 0 3 3 3 2 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.13 CTQ26372.1 - 6.5e-11 42.1 0.4 6.4e-06 25.8 0.2 2.3 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp_4 PF13535.6 CTQ26372.1 - 4.7e-10 39.3 0.2 5.5e-05 22.8 0.0 4.5 4 2 0 4 4 4 2 ATP-grasp domain CoA_binding_2 PF13380.6 CTQ26372.1 - 0.00017 22.1 0.0 4 8.0 0.0 4.1 3 1 0 3 3 3 2 CoA binding domain ATP-grasp_5 PF13549.6 CTQ26372.1 - 0.0017 17.9 0.1 5.1 6.5 0.0 3.5 3 0 0 3 3 3 1 ATP-grasp domain SmpA_OmlA PF04355.13 CTQ26372.1 - 0.029 14.2 0.0 0.064 13.1 0.0 1.5 1 0 0 1 1 1 0 SmpA / OmlA family DUF903 PF06004.12 CTQ26373.1 - 3.9e-18 65.1 4.1 4.5e-18 64.9 4.1 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF903) DUF599 PF04654.12 CTQ26373.1 - 0.13 11.6 0.1 0.13 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF599 Flavodoxin_2 PF02525.17 CTQ26374.1 - 5e-39 134.1 0.0 5.8e-39 133.9 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 CTQ26374.1 - 3.8e-07 30.0 0.0 6.1e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Na_H_Exchanger PF00999.21 CTQ26375.1 - 4.3e-62 210.1 50.3 5.6e-62 209.7 50.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 CTQ26375.1 - 7.4e-25 87.5 0.2 6.2e-24 84.5 0.0 2.3 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_7 PF13241.6 CTQ26375.1 - 0.074 13.5 0.0 0.17 12.4 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding DHFR_1 PF00186.19 CTQ26376.1 - 6.9e-59 198.2 0.0 7.7e-59 198.0 0.0 1.0 1 0 0 1 1 1 1 Dihydrofolate reductase Metallophos PF00149.28 CTQ26377.1 - 8.9e-15 55.7 0.1 3.5e-14 53.8 0.0 1.9 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 CTQ26377.1 - 5.7e-05 23.4 0.0 8e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain FBPase_2 PF06874.11 CTQ26377.1 - 0.043 12.1 0.0 0.06 11.6 0.0 1.2 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase DUF525 PF04379.14 CTQ26378.1 - 7e-33 112.7 0.3 8.3e-33 112.5 0.3 1.1 1 0 0 1 1 1 1 ApaG domain DUF4354 PF14263.6 CTQ26378.1 - 0.052 13.4 0.0 0.068 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) Pax2_C PF12403.8 CTQ26378.1 - 0.057 13.5 0.1 0.077 13.1 0.1 1.3 1 0 0 1 1 1 0 Paired-box protein 2 C terminal RrnaAD PF00398.20 CTQ26379.1 - 2e-86 289.3 0.0 2.3e-86 289.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase H2TH PF06831.14 CTQ26379.1 - 0.052 13.5 0.0 0.099 12.6 0.0 1.5 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain PdxA PF04166.12 CTQ26380.1 - 7e-109 363.6 0.0 8.6e-109 363.3 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA Rotamase PF00639.21 CTQ26381.1 - 1.9e-51 173.0 0.2 4.4e-26 91.7 0.0 3.2 4 0 0 4 4 4 2 PPIC-type PPIASE domain Rotamase_3 PF13616.6 CTQ26381.1 - 8.7e-51 171.4 0.0 2.5e-26 92.5 0.0 2.5 2 0 0 2 2 2 2 PPIC-type PPIASE domain SurA_N PF09312.11 CTQ26381.1 - 6.8e-46 155.2 6.9 6.8e-46 155.2 6.9 1.9 2 0 0 2 2 2 1 SurA N-terminal domain Rotamase_2 PF13145.6 CTQ26381.1 - 4e-18 66.4 0.1 2.1e-07 31.8 0.0 2.8 2 1 0 2 2 2 2 PPIC-type PPIASE domain SurA_N_3 PF13624.6 CTQ26381.1 - 1.6e-14 54.0 3.3 1.6e-14 54.0 3.3 2.5 3 0 0 3 3 3 1 SurA N-terminal domain SurA_N_2 PF13623.6 CTQ26381.1 - 3.9e-07 30.0 3.5 3.9e-07 30.0 3.5 2.6 2 1 1 3 3 3 1 SurA N-terminal domain Trigger_C PF05698.14 CTQ26381.1 - 0.0051 16.8 1.5 0.0051 16.8 1.5 2.4 3 1 0 3 3 3 1 Bacterial trigger factor protein (TF) C-terminus Exonuc_VII_S PF02609.16 CTQ26381.1 - 0.097 12.7 0.0 0.3 11.2 0.0 1.9 1 0 0 1 1 1 0 Exonuclease VII small subunit LptD PF04453.14 CTQ26382.1 - 6.2e-110 368.0 29.9 6.2e-110 368.0 29.9 2.2 1 1 1 2 2 2 2 LPS transport system D OstA PF03968.14 CTQ26382.1 - 1.9e-29 102.2 0.6 4.9e-29 100.8 0.6 1.8 1 0 0 1 1 1 1 OstA-like protein TerB PF05099.13 CTQ26383.1 - 8.3e-11 42.0 1.2 2.2e-10 40.7 1.2 1.6 1 0 0 1 1 1 1 Tellurite resistance protein TerB DnaJ PF00226.31 CTQ26383.1 - 4.1e-10 39.7 0.1 8.2e-10 38.7 0.1 1.5 1 0 0 1 1 1 1 DnaJ domain HTH_10 PF04967.12 CTQ26383.1 - 0.0082 15.9 0.0 0.48 10.3 0.0 2.6 2 0 0 2 2 2 1 HTH DNA binding domain NADH_oxidored PF08040.11 CTQ26383.1 - 0.025 14.3 0.1 0.052 13.2 0.1 1.5 1 0 0 1 1 1 0 MNLL subunit Response_reg PF00072.24 CTQ26384.1 - 1.9e-17 63.4 0.0 3.1e-17 62.7 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain CitT PF12431.8 CTQ26384.1 - 1.4e-05 25.3 0.0 2.9e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.10 CTQ26384.1 - 0.0018 18.1 0.0 0.0043 16.8 0.0 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain AbiEi_4 PF13338.6 CTQ26384.1 - 0.0045 17.1 0.1 0.019 15.1 0.1 2.1 1 1 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin DUF977 PF06163.11 CTQ26384.1 - 0.095 12.7 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) sCache_3_2 PF17203.4 CTQ26385.1 - 2.1e-19 70.0 0.6 4.1e-19 69.1 0.6 1.4 1 0 0 1 1 1 1 Single cache domain 3 HATPase_c PF02518.26 CTQ26385.1 - 2e-17 63.7 0.0 4.2e-17 62.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 CTQ26385.1 - 5.8e-11 42.2 0.0 1.8e-10 40.6 0.0 1.9 1 0 0 1 1 1 1 GHKL domain SPOB_a PF14689.6 CTQ26385.1 - 1.2e-08 34.5 1.7 3.3e-08 33.1 1.7 1.7 1 0 0 1 1 1 1 Sensor_kinase_SpoOB-type, alpha-helical domain dCache_3 PF14827.6 CTQ26385.1 - 2.8e-06 27.2 0.0 4.8e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Double sensory domain of two-component sensor kinase HATPase_c_2 PF13581.6 CTQ26385.1 - 4.9e-06 26.5 0.0 1.3e-05 25.2 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.10 CTQ26385.1 - 1.9e-05 24.9 0.0 0.15 12.3 0.0 2.9 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 CTQ26385.1 - 2.8e-05 24.1 0.0 0.00011 22.2 0.0 2.1 2 0 0 2 2 2 1 PAS fold PAS_7 PF12860.7 CTQ26385.1 - 0.0014 18.8 0.4 0.0079 16.4 0.0 2.5 2 1 0 2 2 1 1 PAS fold PAS_8 PF13188.7 CTQ26385.1 - 0.0023 17.9 0.0 0.0058 16.6 0.0 1.7 1 0 0 1 1 1 1 PAS domain dCache_1 PF02743.18 CTQ26385.1 - 0.0054 16.5 0.2 0.014 15.2 0.0 1.7 2 0 0 2 2 2 1 Cache domain PAS_9 PF13426.7 CTQ26385.1 - 0.0055 16.9 0.0 0.038 14.2 0.0 2.3 2 0 0 2 2 2 1 PAS domain CBS PF00571.28 CTQ26385.1 - 0.031 14.7 0.2 0.083 13.4 0.2 1.8 1 0 0 1 1 1 0 CBS domain XPC-binding PF09280.11 CTQ26385.1 - 0.033 13.9 1.3 0.066 13.0 0.3 2.0 2 0 0 2 2 2 0 XPC-binding domain Rsd_AlgQ PF04353.13 CTQ26385.1 - 0.15 12.0 0.5 0.28 11.1 0.1 1.6 2 0 0 2 2 2 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ TssO PF17561.2 CTQ26385.1 - 3.7 7.7 6.4 15 5.6 0.5 2.4 2 0 0 2 2 2 0 Type VI secretion system, TssO 2HCT PF03390.15 CTQ26386.1 - 1.6e-140 468.5 34.1 1.8e-140 468.3 34.1 1.0 1 0 0 1 1 1 1 2-hydroxycarboxylate transporter family CitX PF03802.14 CTQ26387.1 - 9.1e-56 188.2 0.0 1e-55 188.0 0.0 1.0 1 0 0 1 1 1 1 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase PseudoU_synth_2 PF00849.22 CTQ26388.1 - 2.3e-30 105.8 0.0 2.8e-30 105.5 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase DinI PF06183.13 CTQ26388.1 - 0.14 12.5 0.2 0.3 11.4 0.0 1.6 2 0 0 2 2 2 0 DinI-like family RapA_C PF12137.8 CTQ26389.1 - 1.3e-157 524.4 1.0 2e-157 523.8 1.0 1.3 1 0 0 1 1 1 1 RNA polymerase recycling family C-terminal Tudor_RapA PF18337.1 CTQ26389.1 - 1.3e-26 92.5 0.0 3.3e-26 91.2 0.0 1.7 1 0 0 1 1 1 1 RapA N-terminal Tudor like domain Tudor_1_RapA PF18339.1 CTQ26389.1 - 1.5e-23 82.5 0.0 3.1e-23 81.4 0.0 1.6 1 0 0 1 1 1 1 RapA N-terminal Tudor like domain 1 SNF2_N PF00176.23 CTQ26389.1 - 4.9e-20 71.5 0.0 8.3e-20 70.8 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 CTQ26389.1 - 8e-17 61.6 0.0 1.9e-15 57.2 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CTQ26389.1 - 2e-10 40.9 0.0 5e-10 39.6 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 CTQ26389.1 - 1.5e-05 24.8 0.0 5.7e-05 23.0 0.0 1.9 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_34 PF13872.6 CTQ26389.1 - 0.041 12.8 0.0 0.18 10.6 0.0 1.9 1 1 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 DUF1525 PF07511.11 CTQ26389.1 - 0.39 10.9 2.3 4 7.6 2.3 2.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1525) DNA_pol_B PF00136.21 CTQ26390.1 - 3.9e-42 144.5 0.0 6.8e-33 114.1 0.0 2.4 2 0 0 2 2 2 2 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 CTQ26390.1 - 1.6e-12 47.2 0.0 2.8e-06 26.7 0.0 2.3 2 0 0 2 2 2 2 DNA polymerase family B, exonuclease domain DNA_pol_B_2 PF03175.13 CTQ26390.1 - 0.00013 21.0 0.0 0.014 14.3 0.0 2.1 2 0 0 2 2 2 2 DNA polymerase type B, organellar and viral P63C PF10546.9 CTQ26390.1 - 0.13 12.9 0.1 0.29 11.7 0.1 1.6 1 0 0 1 1 1 0 P63C domain Aldolase_II PF00596.21 CTQ26391.1 - 7.5e-48 162.9 0.1 9.2e-48 162.6 0.1 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Glyco_transf_4 PF13439.6 CTQ26391.1 - 0.22 11.5 2.0 0.61 10.1 0.1 2.1 2 0 0 2 2 2 0 Glycosyltransferase Family 4 Arabinose_Isome PF02610.15 CTQ26392.1 - 5.8e-179 594.8 0.1 6.9e-179 594.6 0.1 1.1 1 0 0 1 1 1 1 L-arabinose isomerase Arabinose_Iso_C PF11762.8 CTQ26392.1 - 6.8e-47 158.0 0.0 2.2e-46 156.4 0.0 1.8 2 0 0 2 2 2 1 L-arabinose isomerase C-terminal domain FGGY_C PF02782.16 CTQ26393.1 - 8.8e-38 130.0 0.4 1.6e-37 129.2 0.4 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 CTQ26393.1 - 4.1e-08 33.1 0.0 0.00061 19.4 0.0 2.6 2 1 0 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain XPC-binding PF09280.11 CTQ26393.1 - 0.0084 15.8 0.7 0.028 14.2 0.7 1.9 1 0 0 1 1 1 1 XPC-binding domain LTXXQ PF07813.12 CTQ26393.1 - 1.7 9.4 10.6 4.3 8.1 0.0 3.2 3 0 0 3 3 3 0 LTXXQ motif family protein AraC_binding PF02311.19 CTQ26395.1 - 3.3e-24 85.3 0.9 5.9e-24 84.5 0.9 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_18 PF12833.7 CTQ26395.1 - 2.1e-20 72.7 0.3 5e-20 71.6 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ26395.1 - 2.5e-19 68.9 0.2 1.8e-08 34.2 0.0 2.6 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding_2 PF14525.6 CTQ26395.1 - 4.7e-05 23.1 0.0 8.3e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 AraC-binding-like domain Cupin_2 PF07883.11 CTQ26395.1 - 7.2e-05 22.4 0.1 0.00016 21.3 0.1 1.5 1 0 0 1 1 1 1 Cupin domain Cupin_4 PF08007.12 CTQ26395.1 - 0.025 14.0 0.5 0.032 13.7 0.5 1.4 1 1 0 1 1 1 0 Cupin superfamily protein Cupin_3 PF05899.12 CTQ26395.1 - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF861) SNARE_assoc PF09335.11 CTQ26396.1 - 7.5e-20 71.6 1.5 7.5e-20 71.6 1.5 2.4 2 1 1 3 3 3 1 SNARE associated Golgi protein ABC_tran PF00005.27 CTQ26397.1 - 2.1e-34 118.9 0.0 3.3e-34 118.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26397.1 - 1.2e-10 41.7 2.9 1.4e-07 31.6 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26397.1 - 6e-06 25.9 0.0 2e-05 24.2 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ26397.1 - 3.4e-05 24.3 0.3 6e-05 23.5 0.3 1.4 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ26397.1 - 0.00031 20.7 0.1 0.0013 18.7 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 CTQ26397.1 - 0.00038 20.1 0.0 0.001 18.8 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 CTQ26397.1 - 0.00083 19.6 0.1 0.0035 17.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 CTQ26397.1 - 0.0032 17.7 0.1 0.046 13.9 0.1 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 CTQ26397.1 - 0.0065 16.5 0.0 0.014 15.4 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_25 PF13481.6 CTQ26397.1 - 0.02 14.4 0.0 0.25 10.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 CTQ26397.1 - 0.027 14.5 0.1 0.062 13.3 0.1 1.5 2 0 0 2 2 2 0 Dynamin family DUF87 PF01935.17 CTQ26397.1 - 0.042 13.9 0.0 0.086 12.9 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain Mg_chelatase PF01078.21 CTQ26397.1 - 0.051 12.9 0.1 0.12 11.8 0.0 1.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Dpoe2NT PF12213.8 CTQ26397.1 - 0.056 13.7 0.1 0.095 13.0 0.1 1.3 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal IstB_IS21 PF01695.17 CTQ26397.1 - 0.078 12.7 0.1 0.97 9.1 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_28 PF13521.6 CTQ26397.1 - 0.078 13.2 0.0 0.16 12.2 0.0 1.7 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 CTQ26397.1 - 0.1 13.1 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 CTQ26397.1 - 0.12 12.1 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 CTQ26397.1 - 0.2 12.1 0.0 2 8.9 0.0 2.1 2 0 0 2 2 2 0 RNA helicase BPD_transp_1 PF00528.22 CTQ26398.1 - 6.6e-12 45.6 26.1 8.1e-09 35.5 11.8 3.6 2 2 2 4 4 4 3 Binding-protein-dependent transport system inner membrane component SBP_bac_6 PF13343.6 CTQ26399.1 - 2.2e-17 63.3 1.9 2.8e-17 62.9 1.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ26399.1 - 5e-14 53.0 4.6 8e-14 52.3 4.6 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 CTQ26399.1 - 3.2e-13 49.9 0.2 4.9e-13 49.4 0.2 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SgrR_N PF12793.7 CTQ26400.1 - 8.7e-42 142.0 5.9 1.7e-41 141.0 5.9 1.5 1 0 0 1 1 1 1 Sugar transport-related sRNA regulator N-term SBP_bac_5 PF00496.22 CTQ26400.1 - 7.4e-18 64.7 0.0 2.3e-17 63.0 0.0 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle HTH_Crp_2 PF13545.6 CTQ26400.1 - 0.075 13.0 0.2 0.16 12.0 0.2 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 CTQ26400.1 - 0.13 12.7 0.0 0.36 11.2 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator MFS_1 PF07690.16 CTQ26401.1 - 1.3e-39 136.1 67.5 4.8e-27 94.8 31.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ26401.1 - 3.4e-07 29.4 22.8 3.5e-05 22.8 10.2 2.3 1 1 0 2 2 2 2 MFS_1 like family MFS_2 PF13347.6 CTQ26401.1 - 4.1e-05 22.3 27.3 4.1e-05 22.3 27.3 2.9 1 1 1 2 2 2 1 MFS/sugar transport protein Nuc_H_symport PF03825.16 CTQ26401.1 - 0.00016 20.8 25.2 0.00023 20.3 25.2 1.2 1 0 0 1 1 1 1 Nucleoside H+ symporter DUF3112 PF11309.8 CTQ26401.1 - 0.068 12.6 2.0 0.22 11.0 2.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) MerE PF05052.12 CTQ26401.1 - 2.7 8.0 9.0 0.55 10.2 0.5 3.4 3 1 0 3 3 3 0 MerE protein MFS_1 PF07690.16 CTQ26402.1 - 2.3e-55 187.9 55.8 6.9e-54 183.1 29.1 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ26402.1 - 1.1e-06 27.8 34.3 0.0013 17.7 16.5 3.5 2 2 1 3 3 3 3 Sugar (and other) transporter MFS_4 PF06779.14 CTQ26402.1 - 0.00011 21.6 17.6 0.001 18.5 1.0 2.1 2 0 0 2 2 2 2 Uncharacterised MFS-type transporter YbfB DUF3464 PF11947.8 CTQ26402.1 - 0.00032 20.5 2.0 0.00032 20.5 2.0 1.9 1 1 1 2 2 2 1 Photosynthesis affected mutant 68 ARL6IP6 PF15062.6 CTQ26402.1 - 0.11 12.6 1.6 12 6.2 0.1 3.3 2 1 1 3 3 3 0 Haemopoietic lineage transmembrane helix LysR_substrate PF03466.20 CTQ26403.1 - 9.3e-33 113.3 0.0 1.3e-32 112.9 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26403.1 - 1.1e-17 63.6 0.0 2.2e-17 62.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Ribosomal_S6 PF01250.17 CTQ26403.1 - 0.03 14.6 0.0 0.17 12.2 0.0 2.0 1 1 1 2 2 2 0 Ribosomal protein S6 DHquinase_I PF01487.15 CTQ26404.1 - 3.1e-74 250.1 0.0 3.5e-74 249.9 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase Imm75 PF15660.6 CTQ26404.1 - 0.0072 16.6 0.1 0.018 15.3 0.0 1.6 2 0 0 2 2 2 1 Putative Immunity protein 75 AlkA_N PF06029.11 CTQ26404.1 - 0.036 14.3 0.5 0.18 12.1 0.1 2.2 2 0 0 2 2 2 0 AlkA N-terminal domain DUF4483 PF14825.6 CTQ26404.1 - 0.051 13.3 0.0 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4483) MFS_1 PF07690.16 CTQ26405.1 - 1.3e-27 96.7 58.5 2.1e-23 82.9 43.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily PUCC PF03209.15 CTQ26405.1 - 0.0023 17.0 21.7 0.029 13.4 21.4 2.3 1 1 0 1 1 1 1 PUCC protein Shikimate_dh_N PF08501.11 CTQ26406.1 - 5.1e-30 103.6 0.0 9.7e-30 102.7 0.0 1.5 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 CTQ26406.1 - 1e-12 47.6 0.5 2.1e-12 46.6 0.5 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 CTQ26406.1 - 0.013 15.6 0.0 0.02 15.0 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Oxidored_FMN PF00724.20 CTQ26407.1 - 1.1e-71 241.9 0.0 2.2e-71 240.9 0.0 1.4 2 0 0 2 2 2 1 NADH:flavin oxidoreductase / NADH oxidase family Pyr_redox_2 PF07992.14 CTQ26407.1 - 3.6e-28 98.6 5.8 1.4e-23 83.6 1.5 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ26407.1 - 9e-16 58.2 2.7 1.6e-08 35.0 0.3 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ26407.1 - 4.1e-09 36.6 1.2 2.6e-05 24.3 0.0 3.0 3 0 0 3 3 2 2 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 CTQ26407.1 - 4.1e-08 32.8 4.0 0.00075 18.9 0.1 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 CTQ26407.1 - 8.1e-08 32.0 0.4 2.1e-07 30.7 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 CTQ26407.1 - 9.1e-07 28.3 1.4 1.1e-06 28.0 0.1 1.7 2 0 0 2 2 2 1 Glucose inhibited division protein A HI0933_like PF03486.14 CTQ26407.1 - 3.5e-06 26.0 8.5 6.4e-05 21.8 0.8 2.7 2 1 1 3 3 3 2 HI0933-like protein Pyr_redox_3 PF13738.6 CTQ26407.1 - 6.9e-06 25.5 0.2 0.018 14.3 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 CTQ26407.1 - 1.2e-05 25.7 0.7 0.006 17.0 0.1 2.8 3 0 0 3 3 2 1 Putative NAD(P)-binding 3HCDH_N PF02737.18 CTQ26407.1 - 3.5e-05 23.8 2.6 0.062 13.2 0.6 2.3 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 CTQ26407.1 - 4.8e-05 22.8 0.4 0.016 14.6 0.1 2.4 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_2 PF00890.24 CTQ26407.1 - 0.00011 21.5 1.8 0.00011 21.5 1.8 1.6 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 CTQ26407.1 - 0.00016 21.0 0.8 0.056 12.7 0.1 2.4 2 0 0 2 2 2 2 Thi4 family ThiF PF00899.21 CTQ26407.1 - 0.00023 20.6 0.5 0.15 11.4 0.0 2.5 2 0 0 2 2 2 2 ThiF family DAO PF01266.24 CTQ26407.1 - 0.00031 20.5 1.7 0.23 11.0 0.0 2.6 2 0 0 2 2 2 2 FAD dependent oxidoreductase K_oxygenase PF13434.6 CTQ26407.1 - 0.00039 19.7 0.1 0.19 10.8 0.0 2.2 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) Shikimate_DH PF01488.20 CTQ26407.1 - 0.00041 20.4 2.4 0.012 15.6 0.2 2.7 2 1 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase IMPDH PF00478.25 CTQ26407.1 - 0.0054 15.8 0.0 0.013 14.6 0.0 1.5 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FAD_binding_3 PF01494.19 CTQ26407.1 - 0.01 15.1 0.4 0.52 9.5 0.1 2.2 2 0 0 2 2 2 0 FAD binding domain ELFV_dehydrog PF00208.21 CTQ26407.1 - 0.011 15.5 0.6 0.024 14.4 0.1 1.8 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Dus PF01207.17 CTQ26407.1 - 0.018 14.1 0.2 0.068 12.3 0.0 2.0 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) XdhC_C PF13478.6 CTQ26407.1 - 0.053 14.0 2.8 7.3 7.1 0.0 2.4 2 0 0 2 2 2 0 XdhC Rossmann domain FMO-like PF00743.19 CTQ26407.1 - 0.067 11.6 0.1 10 4.4 0.0 2.4 2 1 0 2 2 2 0 Flavin-binding monooxygenase-like UDPG_MGDP_dh_N PF03721.14 CTQ26407.1 - 0.1 12.2 0.2 1.1 8.8 0.0 2.4 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TACI-CRD2 PF09305.10 CTQ26407.1 - 0.23 11.5 0.9 0.48 10.5 0.9 1.5 1 0 0 1 1 1 0 TACI, cysteine-rich domain ApbA PF02558.16 CTQ26407.1 - 0.28 10.8 1.3 3.3 7.4 0.3 2.5 2 1 0 2 2 2 0 Ketopantoate reductase PanE/ApbA AdoHcyase_NAD PF00670.21 CTQ26407.1 - 0.4 10.7 3.2 3.1 7.9 0.1 3.1 3 1 0 3 3 3 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TrkA_N PF02254.18 CTQ26407.1 - 0.43 10.9 2.9 1.7 8.9 0.1 2.9 3 0 0 3 3 2 0 TrkA-N domain Aconitase_C PF00694.19 CTQ26408.1 - 1e-40 139.1 0.0 1.3e-40 138.7 0.0 1.1 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase PF00330.20 CTQ26409.1 - 9.1e-163 542.5 0.8 1e-162 542.3 0.8 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Spo0M PF07070.11 CTQ26409.1 - 0.13 11.8 0.8 0.23 11.0 0.8 1.3 1 0 0 1 1 1 0 SpoOM protein Iso_dh PF00180.20 CTQ26410.1 - 2.3e-138 461.1 0.0 2.6e-138 460.9 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase HMGL-like PF00682.19 CTQ26411.1 - 3.3e-106 354.7 6.2 4.7e-106 354.2 6.2 1.2 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 CTQ26411.1 - 2.2e-35 121.5 0.1 4.9e-35 120.3 0.1 1.7 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain HTH_1 PF00126.27 CTQ26412.1 - 2.2e-18 65.9 0.0 3.9e-18 65.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 CTQ26412.1 - 8.9e-17 61.1 0.1 1.4e-16 60.5 0.1 1.3 1 0 0 1 1 1 1 LysR substrate binding domain TPP_enzyme_N PF02776.18 CTQ26413.1 - 1.5e-58 197.2 0.5 2.9e-55 186.5 0.2 2.4 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 CTQ26413.1 - 2.4e-50 170.3 0.0 3e-49 166.7 0.0 2.5 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 CTQ26413.1 - 5.6e-47 158.9 0.0 1.1e-46 158.0 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 CTQ26413.1 - 0.0071 16.1 0.9 0.014 15.2 0.5 1.6 2 0 0 2 2 2 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Kindlin_2_N PF18124.1 CTQ26413.1 - 0.018 15.2 0.0 0.044 14.0 0.0 1.7 1 0 0 1 1 1 0 Kindlin-2 N-terminal domain ROQ_II PF18386.1 CTQ26413.1 - 0.12 12.3 0.8 0.3 10.9 0.2 2.0 2 0 0 2 2 2 0 Roquin II domain XFP_N PF09364.10 CTQ26413.1 - 0.15 10.8 0.0 0.27 10.0 0.0 1.3 1 0 0 1 1 1 0 XFP N-terminal domain ALS_ss_C PF10369.9 CTQ26414.1 - 7.5e-26 90.1 0.6 7.9e-24 83.7 0.2 2.2 2 0 0 2 2 2 2 Small subunit of acetolactate synthase ACT_5 PF13710.6 CTQ26414.1 - 1.7e-16 59.8 0.0 4e-16 58.6 0.0 1.7 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 CTQ26414.1 - 4.4e-14 51.9 0.0 8e-14 51.1 0.0 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 CTQ26414.1 - 1.9e-05 25.1 0.2 0.0003 21.3 0.1 2.2 2 0 0 2 2 2 1 ACT domain UvrB_inter PF17757.1 CTQ26414.1 - 0.073 13.3 0.1 0.47 10.7 0.0 2.1 2 1 0 2 2 2 0 UvrB interaction domain LacI PF00356.21 CTQ26415.1 - 2.4e-19 68.8 0.8 5.3e-19 67.7 0.8 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_1 PF00532.21 CTQ26415.1 - 4.3e-13 49.3 0.0 5.8e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ26415.1 - 2.3e-11 44.3 0.1 5.4e-10 39.9 0.0 2.3 2 1 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 CTQ26415.1 - 5.1e-10 39.3 0.0 6.6e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain DUF4543 PF15076.6 CTQ26415.1 - 0.0028 17.7 0.3 0.0087 16.2 0.1 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4543) HTH_3 PF01381.22 CTQ26415.1 - 0.019 15.0 0.0 0.046 13.8 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix LysR_substrate PF03466.20 CTQ26415.1 - 0.07 12.5 2.3 3.7 6.9 0.1 3.1 3 0 0 3 3 3 0 LysR substrate binding domain MraZ PF02381.18 CTQ26416.1 - 1.5e-44 149.8 0.0 2.6e-22 78.6 0.0 2.1 2 0 0 2 2 2 2 MraZ protein, putative antitoxin-like Methyltransf_5 PF01795.19 CTQ26417.1 - 5e-121 404.0 0.0 5.6e-121 403.8 0.0 1.0 1 0 0 1 1 1 1 MraW methylase family Methyltransf_25 PF13649.6 CTQ26417.1 - 0.0046 17.6 0.0 1.1 10.0 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ26417.1 - 0.007 16.2 0.0 0.52 10.1 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_24 PF13578.6 CTQ26417.1 - 0.011 16.7 0.0 0.14 13.2 0.0 2.3 2 1 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ26417.1 - 0.051 14.2 0.0 15 6.3 0.0 2.4 2 0 0 2 2 2 0 Methyltransferase domain FtsJ PF01728.19 CTQ26417.1 - 0.13 12.3 0.0 0.92 9.6 0.0 2.0 1 1 0 1 1 1 0 FtsJ-like methyltransferase FtsL PF04999.13 CTQ26418.1 - 9.6e-36 121.7 0.1 1.1e-35 121.5 0.1 1.1 1 0 0 1 1 1 1 Cell division protein FtsL DivIC PF04977.15 CTQ26418.1 - 0.0096 15.7 0.1 0.013 15.3 0.1 1.1 1 0 0 1 1 1 1 Septum formation initiator Transpeptidase PF00905.22 CTQ26420.1 - 1.4e-84 283.9 0.1 1.8e-84 283.6 0.1 1.1 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 CTQ26420.1 - 2.3e-23 83.4 0.0 7.5e-22 78.5 0.0 2.2 1 1 0 1 1 1 1 Penicillin-binding Protein dimerisation domain DUF1616 PF07760.11 CTQ26420.1 - 0.096 12.1 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) Mur_ligase_M PF08245.12 CTQ26421.1 - 1.4e-50 172.0 0.2 2.2e-50 171.3 0.2 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 CTQ26421.1 - 3.7e-26 91.2 0.0 3.7e-25 88.0 0.0 2.5 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 CTQ26421.1 - 7.2e-13 48.7 0.4 3.2e-12 46.6 0.4 2.2 1 0 0 1 1 1 1 Mur ligase family, catalytic domain GGDEF_2 PF17853.1 CTQ26421.1 - 0.03 14.6 0.3 0.93 9.8 0.0 2.8 2 1 0 2 2 2 0 GGDEF-like domain Mur_ligase_M PF08245.12 CTQ26422.1 - 1.3e-50 172.1 0.1 2e-50 171.5 0.1 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 CTQ26422.1 - 2.4e-15 56.5 0.0 4.7e-14 52.4 0.0 2.6 1 1 1 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 CTQ26422.1 - 8.3e-13 48.5 0.1 8.8e-12 45.2 0.0 2.5 2 0 0 2 2 2 1 Mur ligase family, catalytic domain LpxD PF04613.14 CTQ26422.1 - 0.0048 16.6 0.0 0.011 15.5 0.0 1.6 1 0 0 1 1 1 1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD YAcAr PF10686.9 CTQ26422.1 - 0.01 15.7 0.3 0.096 12.7 0.0 2.7 3 0 0 3 3 3 0 YspA, cpYpsA-related SLOG family Glycos_transf_4 PF00953.21 CTQ26423.1 - 3.3e-34 118.2 16.0 3.3e-34 118.2 16.0 2.1 3 0 0 3 3 3 1 Glycosyl transferase family 4 MraY_sig1 PF10555.9 CTQ26423.1 - 1e-05 24.8 3.3 1e-05 24.8 3.3 2.7 2 0 0 2 2 2 1 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 OapA_N PF08525.11 CTQ26423.1 - 1.9 8.6 8.4 0.49 10.4 0.8 3.2 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif Ndc1_Nup PF09531.10 CTQ26423.1 - 2.3 6.8 6.3 0.089 11.5 0.2 1.7 3 0 0 3 3 3 0 Nucleoporin protein Ndc1-Nup Mur_ligase_M PF08245.12 CTQ26424.1 - 6.4e-29 101.3 0.0 1e-28 100.7 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 CTQ26424.1 - 9.4e-09 35.4 0.0 7.7e-08 32.5 0.0 2.3 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain NAD_binding_7 PF13241.6 CTQ26424.1 - 0.048 14.1 0.1 0.14 12.6 0.0 1.9 2 0 0 2 2 2 0 Putative NAD(P)-binding FTSW_RODA_SPOVE PF01098.19 CTQ26425.1 - 8.5e-129 429.6 23.6 1.1e-128 429.3 23.6 1.0 1 0 0 1 1 1 1 Cell cycle protein Glyco_transf_28 PF03033.20 CTQ26426.1 - 1.7e-48 164.2 0.1 3.1e-48 163.4 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Glyco_tran_28_C PF04101.16 CTQ26426.1 - 1.3e-36 126.1 0.0 1.8e-36 125.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_4 PF13439.6 CTQ26426.1 - 5.8e-09 36.2 0.1 3.7e-08 33.6 0.0 2.0 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 CTQ26426.1 - 2.1e-06 28.2 0.4 2.1e-05 25.0 0.1 2.4 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 CTQ26426.1 - 7.3e-06 26.5 2.7 7.5e-05 23.2 2.2 2.4 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain adh_short PF00106.25 CTQ26426.1 - 0.085 12.3 0.2 1 8.8 0.1 2.1 2 0 0 2 2 2 0 short chain dehydrogenase OTCace PF00185.24 CTQ26426.1 - 0.11 12.6 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FMN_red PF03358.15 CTQ26426.1 - 0.13 12.0 0.6 6.8 6.4 0.0 3.1 2 1 1 3 3 3 0 NADPH-dependent FMN reductase Mur_ligase_M PF08245.12 CTQ26427.1 - 5.5e-30 104.8 0.0 7.4e-30 104.4 0.0 1.2 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase PF01225.25 CTQ26427.1 - 7.9e-30 103.0 1.0 1.5e-29 102.2 0.3 1.8 2 0 0 2 2 2 1 Mur ligase family, catalytic domain Mur_ligase_C PF02875.21 CTQ26427.1 - 8.9e-22 77.2 0.0 3.9e-21 75.1 0.0 2.2 3 0 0 3 3 3 1 Mur ligase family, glutamate ligase domain B_solenoid_dext PF18841.1 CTQ26427.1 - 0.029 14.7 0.2 0.087 13.1 0.2 1.8 1 0 0 1 1 1 0 Beta solenoid repeat from Dextranase Dala_Dala_lig_C PF07478.13 CTQ26428.1 - 1.8e-66 223.6 0.0 2.2e-66 223.3 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 CTQ26428.1 - 2.1e-19 69.9 0.2 9.4e-18 64.6 0.2 2.3 1 1 0 1 1 1 1 D-ala D-ala ligase N-terminus CPSase_L_D2 PF02786.17 CTQ26428.1 - 1.2e-06 28.2 0.0 0.00096 18.7 0.0 2.1 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.6 CTQ26428.1 - 3.9e-05 23.3 0.0 0.0005 19.7 0.0 2.2 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 CTQ26428.1 - 0.0048 16.5 0.0 0.0064 16.1 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.6 CTQ26428.1 - 0.0098 15.2 0.0 0.017 14.4 0.0 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 CTQ26428.1 - 0.028 13.7 0.0 0.079 12.2 0.0 1.6 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp TTL PF03133.15 CTQ26428.1 - 0.029 13.5 0.0 0.041 13.0 0.0 1.2 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family FtsQ PF03799.15 CTQ26429.1 - 1.1e-27 97.1 0.2 1.7e-27 96.5 0.2 1.3 1 0 0 1 1 1 1 Cell division protein FtsQ POTRA_1 PF08478.10 CTQ26429.1 - 2.4e-21 75.8 0.1 4.4e-21 74.9 0.1 1.5 1 0 0 1 1 1 1 POTRA domain, FtsQ-type FtsA PF14450.6 CTQ26430.1 - 4.6e-34 116.9 1.3 1.1e-24 86.8 0.0 2.1 2 0 0 2 2 2 2 Cell division protein FtsA SHS2_FTSA PF02491.20 CTQ26430.1 - 4e-30 104.0 2.2 8.5e-30 103.0 2.2 1.6 1 0 0 1 1 1 1 SHS2 domain inserted in FTSA PilM_2 PF11104.8 CTQ26430.1 - 1.3e-10 40.8 0.5 3.1e-07 29.7 0.1 2.7 2 1 0 2 2 2 2 Type IV pilus assembly protein PilM; MreB_Mbl PF06723.13 CTQ26430.1 - 2e-10 40.0 0.5 2e-10 40.0 0.5 1.9 2 1 1 3 3 3 1 MreB/Mbl protein DDR PF08841.10 CTQ26430.1 - 0.00063 18.8 0.9 0.0021 17.1 0.8 1.8 1 1 1 2 2 2 1 Diol dehydratase reactivase ATPase-like domain EutA PF06277.11 CTQ26430.1 - 0.0011 18.0 0.3 0.0029 16.5 0.1 1.8 2 0 0 2 2 2 1 Ethanolamine utilisation protein EutA Actin PF00022.19 CTQ26430.1 - 0.025 13.2 0.7 4.2 5.9 0.0 2.4 2 1 0 3 3 3 0 Actin HSP70 PF00012.20 CTQ26430.1 - 0.044 12.0 0.7 0.14 10.4 0.2 1.9 2 0 0 2 2 2 0 Hsp70 protein Hydantoinase_A PF01968.18 CTQ26430.1 - 0.047 12.9 0.4 0.15 11.2 0.1 2.0 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase StbA PF06406.11 CTQ26430.1 - 0.062 12.5 0.1 0.63 9.2 0.0 2.2 2 0 0 2 2 2 0 StbA protein ANF_receptor PF01094.28 CTQ26430.1 - 0.16 11.0 0.0 0.22 10.6 0.0 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region SrfB PF07520.11 CTQ26430.1 - 0.17 9.7 0.1 0.97 7.2 0.1 1.8 2 0 0 2 2 2 0 Virulence factor SrfB Tubulin PF00091.25 CTQ26431.1 - 5.9e-42 144.1 0.6 8.7e-42 143.6 0.6 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 CTQ26431.1 - 8.8e-38 128.5 1.2 2.6e-37 127.0 1.2 1.8 1 0 0 1 1 1 1 FtsZ family, C-terminal domain NAD_binding_10 PF13460.6 CTQ26431.1 - 0.005 16.7 0.2 0.016 15.1 0.2 1.9 1 0 0 1 1 1 1 NAD(P)H-binding HATPase_c PF02518.26 CTQ26431.1 - 0.086 13.4 0.2 0.25 11.9 0.0 1.8 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tubulin_2 PF13809.6 CTQ26431.1 - 0.16 11.1 8.2 2.8 7.1 2.8 2.5 1 1 1 2 2 2 0 Tubulin like LpxC PF03331.13 CTQ26432.1 - 1.2e-108 362.7 0.0 1.4e-108 362.5 0.0 1.0 1 0 0 1 1 1 1 UDP-3-O-acyl N-acetylglycosamine deacetylase SecM PF06558.12 CTQ26433.1 - 1.8e-52 177.4 2.4 2.1e-52 177.1 2.4 1.0 1 0 0 1 1 1 1 Secretion monitor precursor protein (SecM) DUF2547 PF10818.8 CTQ26433.1 - 0.00027 21.8 0.2 0.027 15.4 0.0 2.4 1 1 1 2 2 2 2 Protein of unknown function (DUF2547) SecA_DEAD PF07517.14 CTQ26434.1 - 5.3e-132 439.5 0.4 9.4e-132 438.7 0.4 1.4 1 0 0 1 1 1 1 SecA DEAD-like domain SecA_SW PF07516.13 CTQ26434.1 - 1.4e-69 234.1 6.9 1.4e-69 234.1 6.9 1.9 2 0 0 2 2 2 1 SecA Wing and Scaffold domain SecA_PP_bind PF01043.20 CTQ26434.1 - 4.8e-40 136.7 0.2 1.2e-39 135.4 0.2 1.7 1 0 0 1 1 1 1 SecA preprotein cross-linking domain SEC-C PF02810.15 CTQ26434.1 - 7e-11 41.8 9.7 1.2e-10 41.1 9.7 1.4 1 0 0 1 1 1 1 SEC-C motif DEAD PF00270.29 CTQ26434.1 - 0.00029 20.7 0.1 0.0026 17.6 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase DUF2175 PF09943.9 CTQ26434.1 - 0.097 13.0 1.9 0.28 11.5 0.2 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) DUF2764 PF10962.8 CTQ26434.1 - 0.11 12.0 2.2 0.12 11.8 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2764) FOXP-CC PF16159.5 CTQ26434.1 - 0.45 11.2 2.4 2.2 9.0 2.4 2.3 1 0 0 1 1 1 0 FOXP coiled-coil domain Helicase_C PF00271.31 CTQ26434.1 - 0.52 10.7 2.4 3 8.2 0.0 2.7 2 0 0 2 2 2 0 Helicase conserved C-terminal domain NUDIX PF00293.28 CTQ26435.1 - 1.6e-19 70.2 0.0 1.8e-19 70.1 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 CTQ26435.1 - 5.6e-15 55.3 0.0 6.4e-15 55.1 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.6 CTQ26435.1 - 0.13 11.9 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Nucleotide hydrolase YacG PF03884.14 CTQ26436.1 - 2.4e-26 91.2 1.2 3e-26 90.9 1.2 1.1 1 0 0 1 1 1 1 DNA gyrase inhibitor YacG Lar_restr_allev PF14354.6 CTQ26436.1 - 0.037 14.4 0.4 0.058 13.8 0.4 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar ZapD PF07072.11 CTQ26437.1 - 5.3e-78 261.6 3.3 6.1e-78 261.4 3.3 1.0 1 0 0 1 1 1 1 Cell division protein CoaE PF01121.20 CTQ26438.1 - 1.5e-71 239.7 0.2 1.9e-71 239.4 0.2 1.1 1 0 0 1 1 1 1 Dephospho-CoA kinase SKI PF01202.22 CTQ26438.1 - 4e-05 23.8 0.4 0.098 12.8 0.0 2.2 2 0 0 2 2 2 2 Shikimate kinase AAA_33 PF13671.6 CTQ26438.1 - 5.4e-05 23.4 0.6 0.00064 19.9 0.6 2.4 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ26438.1 - 0.00024 20.8 0.6 0.00044 19.9 0.6 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 CTQ26438.1 - 0.0006 20.4 1.4 0.014 15.9 1.3 2.4 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 CTQ26438.1 - 0.00062 20.0 3.1 0.0058 16.9 2.5 2.6 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.6 CTQ26438.1 - 0.0012 19.3 0.7 0.0094 16.4 0.7 2.2 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 CTQ26438.1 - 0.0028 17.8 2.4 0.12 12.5 2.4 2.8 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_22 PF13401.6 CTQ26438.1 - 0.021 15.1 0.2 0.16 12.3 0.0 2.3 1 1 2 3 3 3 0 AAA domain Caudo_TAP PF02413.17 CTQ26438.1 - 0.028 14.6 0.3 0.045 13.9 0.3 1.4 1 0 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK Cytidylate_kin PF02224.18 CTQ26438.1 - 0.033 13.9 0.9 0.11 12.2 0.9 1.9 1 1 0 1 1 1 0 Cytidylate kinase PRK PF00485.18 CTQ26438.1 - 0.059 13.1 1.1 2.2 8.0 0.1 2.2 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Thymidylate_kin PF02223.17 CTQ26438.1 - 0.063 13.0 0.4 0.61 9.7 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase ABC_tran PF00005.27 CTQ26438.1 - 0.063 13.8 1.0 0.13 12.7 1.0 1.9 1 1 0 1 1 1 0 ABC transporter APS_kinase PF01583.20 CTQ26438.1 - 0.081 12.8 0.1 0.15 12.0 0.1 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase CobU PF02283.16 CTQ26438.1 - 0.096 12.3 2.2 1.6 8.3 0.1 2.2 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase tRNA_lig_kinase PF08303.11 CTQ26438.1 - 0.15 12.2 0.0 14 5.7 0.0 2.2 2 0 0 2 2 2 0 tRNA ligase kinase domain AAA_16 PF13191.6 CTQ26438.1 - 0.18 12.1 3.0 0.91 9.9 3.0 2.1 1 1 0 1 1 1 0 AAA ATPase domain IMPDH PF00478.25 CTQ26439.1 - 1.3e-80 271.1 1.3 1.8e-80 270.6 1.3 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 CTQ26439.1 - 1.9e-05 23.9 0.8 2.7e-05 23.3 0.8 1.4 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NBD_C PF17042.5 CTQ26439.1 - 0.0068 16.9 0.1 0.015 15.8 0.0 1.6 1 1 1 2 2 2 1 Nucleotide-binding C-terminal domain dCache_3 PF14827.6 CTQ26439.1 - 0.13 11.9 0.0 0.21 11.2 0.0 1.4 1 1 0 1 1 1 0 Double sensory domain of two-component sensor kinase T2SSF PF00482.23 CTQ26440.1 - 5.8e-56 187.8 8.9 3.9e-29 101.1 2.8 2.4 2 0 0 2 2 2 2 Type II secretion system (T2SS), protein F Nucleos_tra2_N PF01773.20 CTQ26440.1 - 0.48 11.1 4.2 0.94 10.1 0.1 2.7 3 0 0 3 3 3 0 Na+ dependent nucleoside transporter N-terminus T2SSE PF00437.20 CTQ26441.1 - 3.6e-84 282.0 1.6 4.9e-84 281.6 1.6 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_30 PF13604.6 CTQ26441.1 - 8.4e-06 25.6 0.2 2.6e-05 24.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 CTQ26441.1 - 7e-05 23.3 1.6 0.00071 20.0 0.1 2.4 2 1 0 2 2 2 1 AAA ATPase domain T2SSE_N PF05157.15 CTQ26441.1 - 8.1e-05 22.8 0.1 0.00029 21.1 0.1 1.9 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein E, N-terminal domain AAA_22 PF13401.6 CTQ26441.1 - 0.0013 19.0 0.1 0.0061 16.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 CTQ26441.1 - 0.0016 18.3 0.0 0.0016 18.3 0.0 2.3 2 1 0 3 3 3 1 AAA domain AAA_7 PF12775.7 CTQ26441.1 - 0.0072 15.9 0.0 0.026 14.1 0.0 1.9 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_14 PF13173.6 CTQ26441.1 - 0.0085 16.1 0.0 0.018 15.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain Nrap_D3 PF17404.2 CTQ26441.1 - 0.0097 16.0 0.1 0.02 15.0 0.1 1.5 1 0 0 1 1 1 1 Nrap protein domain 3 AAA_19 PF13245.6 CTQ26441.1 - 0.01 16.2 0.2 0.036 14.4 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CTQ26441.1 - 0.028 14.6 0.2 8.7 6.5 0.0 2.5 2 0 0 2 2 2 0 AAA domain ResIII PF04851.15 CTQ26441.1 - 0.06 13.4 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_29 PF13555.6 CTQ26441.1 - 0.063 13.0 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ26441.1 - 0.075 13.5 0.8 0.54 10.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 CTQ26441.1 - 0.094 12.3 0.0 0.21 11.1 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain N_methyl PF07963.12 CTQ26442.1 - 1.2e-10 40.4 1.6 2.3e-10 39.6 1.6 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif Pilin PF00114.19 CTQ26442.1 - 0.00075 20.4 0.1 0.001 20.0 0.1 1.2 1 0 0 1 1 1 1 Pilin (bacterial filament) QRPTase_C PF01729.19 CTQ26443.1 - 8.4e-59 198.1 0.2 1.1e-58 197.7 0.2 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 CTQ26443.1 - 9.6e-26 89.7 0.1 1.5e-24 85.9 0.0 2.5 2 1 1 3 3 3 1 Quinolinate phosphoribosyl transferase, N-terminal domain Biotin_lipoyl PF00364.22 CTQ26443.1 - 0.0024 17.7 0.0 0.0065 16.3 0.0 1.6 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 CTQ26443.1 - 0.0083 15.9 0.0 0.026 14.4 0.0 1.8 1 0 0 1 1 1 1 Biotin-lipoyl like IMPDH PF00478.25 CTQ26443.1 - 0.12 11.3 0.2 0.17 10.8 0.2 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Amidase_2 PF01510.25 CTQ26444.1 - 7.2e-26 91.1 0.0 8.4e-26 90.9 0.0 1.1 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase AmpE PF17113.5 CTQ26445.1 - 5.8e-163 541.0 12.0 6.5e-163 540.9 12.0 1.0 1 0 0 1 1 1 1 Regulatory signalling modulator protein AmpE CobD_Cbib PF03186.13 CTQ26445.1 - 0.058 12.6 6.9 0.99 8.6 6.5 2.7 1 1 0 1 1 1 0 CobD/Cbib protein DUF4044 PF13253.6 CTQ26445.1 - 0.089 12.3 3.6 0.26 10.8 3.6 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) Glyco_hydro_43 PF04616.14 CTQ26446.1 - 2.1e-77 260.3 1.1 2.4e-77 260.1 1.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 MFS_2 PF13347.6 CTQ26447.1 - 4.8e-104 348.3 34.4 5.4e-104 348.1 34.4 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 CTQ26447.1 - 9.3e-12 44.5 26.6 9.3e-12 44.5 26.6 2.0 1 1 0 2 2 2 1 Major Facilitator Superfamily ATG22 PF11700.8 CTQ26447.1 - 0.32 9.6 21.3 0.085 11.5 1.0 3.6 3 1 1 4 4 4 0 Vacuole effluxer Atg22 like AA_permease PF00324.21 CTQ26448.1 - 2.4e-125 418.9 45.6 2.9e-125 418.6 45.6 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ26448.1 - 2.9e-41 141.7 48.3 3.7e-41 141.4 48.3 1.0 1 0 0 1 1 1 1 Amino acid permease GntR PF00392.21 CTQ26450.1 - 6.9e-26 89.7 0.4 1.7e-25 88.4 0.4 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 CTQ26450.1 - 1e-17 64.7 12.3 2.3e-17 63.6 12.3 1.6 1 0 0 1 1 1 1 FCD domain MarR PF01047.22 CTQ26450.1 - 0.00021 21.2 0.2 0.001 19.0 0.0 2.2 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 CTQ26450.1 - 0.00038 20.3 0.4 0.0016 18.3 0.1 2.2 2 0 0 2 2 2 1 MarR family PaaX PF07848.12 CTQ26450.1 - 0.00049 20.3 0.2 0.0061 16.8 0.1 2.3 2 0 0 2 2 2 1 PaaX-like protein HTH_DeoR PF08220.12 CTQ26450.1 - 0.0023 17.6 0.0 0.006 16.3 0.0 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ26450.1 - 0.0029 17.5 0.0 0.0086 16.0 0.0 1.8 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 CTQ26450.1 - 0.003 17.1 0.0 0.0068 15.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 CTQ26450.1 - 0.0046 17.0 0.1 0.021 15.0 0.1 2.1 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 CTQ26450.1 - 0.0053 16.6 0.3 0.022 14.6 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 CTQ26450.1 - 0.019 15.1 0.0 0.033 14.4 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_29 PF13551.6 CTQ26450.1 - 0.051 13.6 0.9 0.12 12.4 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn helix HTH_10 PF04967.12 CTQ26450.1 - 0.087 12.6 0.0 0.24 11.2 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain Rrf2 PF02082.20 CTQ26450.1 - 0.095 13.1 0.0 0.22 11.9 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_27 PF13463.6 CTQ26450.1 - 0.13 12.7 0.5 1 9.9 0.0 2.6 3 0 0 3 3 2 0 Winged helix DNA-binding domain PDH_E1_M PF17831.1 CTQ26451.1 - 6.1e-106 353.1 0.1 1e-105 352.4 0.1 1.4 1 0 0 1 1 1 1 Pyruvate dehydrogenase E1 component middle domain Transketolase_N PF00456.21 CTQ26451.1 - 4.4e-16 58.7 0.0 6e-09 35.3 0.0 2.3 2 0 0 2 2 2 2 Transketolase, thiamine diphosphate binding domain Transketolase_C PF02780.20 CTQ26451.1 - 0.052 13.4 0.0 0.44 10.4 0.0 2.4 2 0 0 2 2 2 0 Transketolase, C-terminal domain PFO_beta_C PF12367.8 CTQ26451.1 - 0.075 13.2 0.0 0.35 11.1 0.0 2.1 1 0 0 1 1 1 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal Viral_DNA_bp PF00747.17 CTQ26451.1 - 0.27 8.3 0.0 0.4 7.8 0.0 1.1 1 0 0 1 1 1 0 ssDNA binding protein 2-oxoacid_dh PF00198.23 CTQ26452.1 - 6.8e-79 264.6 0.0 9.5e-79 264.1 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 CTQ26452.1 - 1.8e-66 219.9 34.2 5e-22 77.5 4.5 3.4 3 0 0 3 3 3 3 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 CTQ26452.1 - 2.1e-15 56.3 9.3 0.0055 16.5 0.0 6.3 6 0 0 6 6 6 4 Biotin-lipoyl like E3_binding PF02817.17 CTQ26452.1 - 2.5e-15 56.5 0.1 2.5e-15 56.5 0.1 2.3 2 0 0 2 2 2 1 e3 binding domain RnfC_N PF13375.6 CTQ26452.1 - 9.2e-13 48.0 13.4 0.00084 19.3 0.8 4.0 3 1 0 3 3 3 3 RnfC Barrel sandwich hybrid domain GCV_H PF01597.19 CTQ26452.1 - 1.3e-09 38.0 16.6 0.0082 16.0 1.5 3.5 3 0 0 3 3 3 3 Glycine cleavage H-protein NQRA PF05896.11 CTQ26452.1 - 2.1e-06 27.4 10.9 0.087 12.2 0.3 3.5 2 1 1 3 3 3 3 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HlyD_D23 PF16576.5 CTQ26452.1 - 8.4e-06 25.1 10.0 0.065 12.4 1.3 5.1 2 2 3 5 5 5 3 Barrel-sandwich domain of CusB or HlyD membrane-fusion PTS_EIIA_1 PF00358.20 CTQ26452.1 - 0.00021 21.1 11.6 4.9 6.9 0.2 6.2 3 3 3 6 6 6 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PYNP_C PF07831.13 CTQ26452.1 - 0.00034 20.2 7.2 13 5.6 0.1 6.1 5 1 1 6 6 6 0 Pyrimidine nucleoside phosphorylase C-terminal domain HlyD_3 PF13437.6 CTQ26452.1 - 0.0014 19.3 16.7 1.1 10.0 2.2 5.7 2 2 3 5 5 5 2 HlyD family secretion protein RNA_pol_inhib PF16857.5 CTQ26452.1 - 0.005 16.6 0.3 30 4.5 0.0 3.7 3 0 0 3 3 3 0 RNA polymerase inhibitor Adeno_knob PF00541.17 CTQ26452.1 - 0.062 13.0 0.0 35 4.1 0.0 3.2 3 0 0 3 3 3 0 Adenoviral fibre protein (knob domain) DUF1223 PF06764.11 CTQ26452.1 - 0.089 12.8 0.0 0.24 11.4 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1223) DUF3597 PF12200.8 CTQ26452.1 - 0.6 10.7 20.5 3.8 8.0 2.0 3.8 3 0 0 3 3 3 0 Domain of unknown function (DUF3597) QRPTase_N PF02749.16 CTQ26452.1 - 0.6 10.2 12.0 26 4.9 0.4 5.3 5 1 0 6 6 6 0 Quinolinate phosphoribosyl transferase, N-terminal domain GCSF PF16647.5 CTQ26452.1 - 3 7.7 5.0 20 5.0 0.2 2.4 2 0 0 2 2 2 0 Granulocyte colony-stimulating factor Pyr_redox_2 PF07992.14 CTQ26453.1 - 1e-61 208.7 5.1 1.4e-61 208.3 5.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 CTQ26453.1 - 4.4e-36 123.5 0.1 1.2e-35 122.0 0.1 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 CTQ26453.1 - 1.2e-17 64.3 5.1 6.1e-15 55.6 1.0 3.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ26453.1 - 2.1e-09 37.1 3.2 4.2e-05 22.9 0.6 3.0 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 CTQ26453.1 - 3.9e-08 33.1 0.3 7.7e-08 32.1 0.3 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 CTQ26453.1 - 4.1e-08 32.7 1.2 2.3e-07 30.3 0.8 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 CTQ26453.1 - 6.4e-06 25.5 1.1 9.4e-05 21.7 0.3 2.6 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 CTQ26453.1 - 1.5e-05 23.9 0.6 0.0026 16.5 0.1 2.3 2 0 0 2 2 2 2 HI0933-like protein AlaDh_PNT_C PF01262.21 CTQ26453.1 - 4.7e-05 22.8 2.8 0.22 10.8 0.1 3.2 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 CTQ26453.1 - 6.8e-05 22.2 0.1 0.00015 21.1 0.1 1.6 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 CTQ26453.1 - 0.00017 21.0 0.4 0.00047 19.5 0.1 1.8 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 CTQ26453.1 - 0.00027 21.1 4.5 0.0012 19.0 0.3 3.0 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 CTQ26453.1 - 0.068 13.1 2.3 6 6.7 0.2 2.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 CTQ26453.1 - 0.2 10.6 0.3 0.78 8.7 0.1 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein DAO PF01266.24 CTQ26453.1 - 7.8 6.0 11.4 0.49 9.9 0.9 3.2 3 1 1 4 4 4 0 FAD dependent oxidoreductase DUF4148 PF13663.6 CTQ26454.1 - 0.042 14.0 0.2 0.072 13.3 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) Bacillus_PapR PF05968.11 CTQ26454.1 - 0.13 12.2 0.7 0.13 12.2 0.7 1.9 2 0 0 2 2 2 0 Bacillus PapR protein PE PF00934.20 CTQ26454.1 - 0.83 10.0 5.2 0.17 12.3 1.1 1.7 2 0 0 2 2 2 0 PE family DUF2950 PF11453.8 CTQ26455.1 - 1.1e-78 264.2 0.7 7.8e-77 258.1 0.7 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF2950) DUF3300 PF11737.8 CTQ26456.1 - 1e-87 293.5 4.8 1e-87 293.5 4.8 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3300) Aconitase_2_N PF06434.13 CTQ26458.1 - 3.1e-98 327.4 0.0 4.5e-98 326.9 0.0 1.2 1 0 0 1 1 1 1 Aconitate hydratase 2 N-terminus Aconitase_B_N PF11791.8 CTQ26458.1 - 5.5e-68 227.9 0.2 9.8e-68 227.1 0.2 1.4 1 0 0 1 1 1 1 Aconitate B N-terminal domain Aconitase PF00330.20 CTQ26458.1 - 2e-40 139.2 0.0 1.2e-38 133.3 0.0 2.4 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Ketoacyl-synt_C PF02801.22 CTQ26458.1 - 0.12 12.4 0.0 0.27 11.3 0.0 1.6 1 0 0 1 1 1 0 Beta-ketoacyl synthase, C-terminal domain UPF0231 PF06062.11 CTQ26459.1 - 1.6e-41 141.3 1.4 1.8e-41 141.2 1.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0231) DUF5395 PF17373.2 CTQ26459.1 - 0.066 13.9 0.1 12 6.6 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5395) AdoMet_dc PF02675.15 CTQ26460.1 - 2.5e-31 108.1 0.0 9.5e-31 106.2 0.0 1.9 2 0 0 2 2 2 1 S-adenosylmethionine decarboxylase RuBisCO_large_N PF02788.16 CTQ26460.1 - 0.0087 16.2 0.2 0.8 9.9 0.0 2.3 2 0 0 2 2 2 2 Ribulose bisphosphate carboxylase large chain, N-terminal domain Col_cuticle_N PF01484.17 CTQ26460.1 - 1.7 8.8 3.6 11 6.1 0.9 2.6 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain Spermine_synth PF01564.17 CTQ26461.1 - 2e-66 223.0 0.0 3.7e-66 222.1 0.0 1.4 2 0 0 2 2 2 1 Spermine/spermidine synthase domain Spermine_synt_N PF17284.2 CTQ26461.1 - 5.8e-20 70.9 0.2 1e-19 70.1 0.2 1.5 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain Methyltransf_25 PF13649.6 CTQ26461.1 - 5.5e-06 27.0 0.1 1.8e-05 25.4 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ26461.1 - 0.00053 20.6 0.0 0.0023 18.5 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ26461.1 - 0.0014 18.4 0.0 0.0023 17.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ26461.1 - 0.0031 17.1 0.0 0.005 16.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 CTQ26461.1 - 0.018 15.8 0.0 0.064 14.0 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ26461.1 - 0.053 13.4 0.0 0.13 12.1 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 CTQ26461.1 - 0.21 11.1 0.5 1.7 8.2 0.1 2.1 1 1 1 2 2 2 0 Methionine biosynthesis protein MetW FKBP_C PF00254.28 CTQ26462.1 - 1.9e-10 40.9 0.0 9.6e-10 38.7 0.0 2.2 2 0 0 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_N PF01346.18 CTQ26462.1 - 2.3e-09 38.1 2.2 2.3e-09 38.1 2.2 6.6 2 2 3 5 5 5 1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PKcGMP_CC PF16808.5 CTQ26462.1 - 0.00058 19.7 8.4 0.21 11.5 0.5 3.7 3 0 0 3 3 3 2 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF3475 PF11961.8 CTQ26462.1 - 0.0049 16.9 7.1 14 5.8 0.2 4.9 3 2 2 5 5 5 1 Domain of unknown function (DUF3475) GAS PF13851.6 CTQ26462.1 - 0.0071 15.7 18.1 0.0071 15.7 18.1 5.1 3 1 4 7 7 7 2 Growth-arrest specific micro-tubule binding DUF2714 PF10896.8 CTQ26462.1 - 0.027 14.5 2.0 0.071 13.2 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2714) SSURE PF11966.8 CTQ26462.1 - 0.046 13.5 18.5 4.1 7.2 0.1 5.9 1 1 4 5 5 5 0 Fibronectin-binding repeat zf-C4H2 PF10146.9 CTQ26462.1 - 0.19 12.0 36.6 0.13 12.5 19.0 3.8 1 1 2 3 3 3 0 Zinc finger-containing protein JIP_LZII PF16471.5 CTQ26462.1 - 1.3 9.2 29.7 0.067 13.4 5.6 5.1 2 1 5 7 7 7 0 JNK-interacting protein leucine zipper II T2SS_PulS_OutS PF09691.10 CTQ26464.1 - 1.8e-09 37.7 0.1 2.4e-09 37.3 0.1 1.1 1 0 0 1 1 1 1 Type II secretion system pilotin lipoprotein (PulS_OutS) Cu-oxidase_3 PF07732.15 CTQ26465.1 - 3.2e-32 111.0 0.1 6.6e-32 110.0 0.1 1.6 1 0 0 1 1 1 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 CTQ26465.1 - 2.4e-27 95.3 4.7 9.5e-25 86.9 2.7 2.4 2 0 0 2 2 2 2 Multicopper oxidase Cu-oxidase PF00394.22 CTQ26465.1 - 3.8e-10 40.1 0.0 2.9e-06 27.5 0.0 3.4 3 1 0 3 3 3 2 Multicopper oxidase TAT_signal PF10518.9 CTQ26465.1 - 5e-05 23.0 0.4 5e-05 23.0 0.4 2.3 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence PQQ PF01011.21 CTQ26466.1 - 6.4e-59 193.3 0.7 1.6e-08 34.0 0.0 8.2 8 0 0 8 8 8 7 PQQ enzyme repeat PQQ_2 PF13360.6 CTQ26466.1 - 4.5e-21 75.5 0.0 2.3e-06 27.3 0.0 4.2 3 1 1 4 4 4 4 PQQ-like domain PQQ_3 PF13570.6 CTQ26466.1 - 3.2e-07 30.6 13.0 2.9 8.5 0.0 8.4 8 3 0 8 8 8 4 PQQ-like domain Pribosyltran PF00156.27 CTQ26467.1 - 1e-24 86.8 0.0 1.3e-24 86.6 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 CTQ26467.1 - 0.013 14.9 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Pro_CA PF00484.19 CTQ26468.1 - 1.5e-50 171.6 0.0 1.9e-50 171.2 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase ABC_tran PF00005.27 CTQ26469.1 - 3.8e-32 111.7 0.0 6.4e-32 110.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26469.1 - 1.4e-13 51.3 2.0 6.8e-09 36.0 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 CTQ26469.1 - 4.8e-05 23.3 0.0 0.067 12.9 0.1 2.1 1 1 1 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 CTQ26469.1 - 0.0022 17.5 0.1 0.059 12.8 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ26469.1 - 0.0032 17.2 0.1 0.007 16.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF4162 PF13732.6 CTQ26469.1 - 0.0037 17.9 0.1 0.015 16.0 0.1 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 CTQ26469.1 - 0.012 15.3 0.0 0.029 14.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 CTQ26469.1 - 0.015 15.8 0.3 0.039 14.5 0.3 1.7 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 CTQ26469.1 - 0.018 14.6 0.0 0.04 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 CTQ26469.1 - 0.022 14.4 0.0 0.036 13.7 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_22 PF13401.6 CTQ26469.1 - 0.069 13.4 0.3 0.43 10.9 0.3 2.2 1 1 0 1 1 1 0 AAA domain RNA_pol_Rpb1_1 PF04997.12 CTQ26469.1 - 0.073 12.4 0.0 0.088 12.1 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 1 CelD_N PF02927.14 CTQ26469.1 - 0.09 13.7 0.0 0.25 12.2 0.0 1.8 1 0 0 1 1 1 0 Cellulase N-terminal ig-like domain ABC2_membrane PF01061.24 CTQ26470.1 - 1.4e-38 132.4 25.5 1.4e-38 132.4 25.5 1.8 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 CTQ26470.1 - 8e-06 25.2 27.7 8e-06 25.2 27.7 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein EIIA-man PF03610.16 CTQ26471.1 - 2.4e-24 85.8 0.0 2.8e-24 85.6 0.0 1.1 1 0 0 1 1 1 1 PTS system fructose IIA component Polysacc_deac_1 PF01522.21 CTQ26472.1 - 9.8e-21 73.9 0.0 1.8e-20 73.0 0.0 1.5 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_transf_4 PF13439.6 CTQ26472.1 - 0.057 13.4 0.9 0.86 9.6 0.2 2.3 2 0 0 2 2 2 0 Glycosyltransferase Family 4 SH3_3 PF08239.11 CTQ26472.1 - 0.057 13.7 0.0 0.39 11.0 0.0 2.4 3 0 0 3 3 3 0 Bacterial SH3 domain Asp_decarbox PF02261.16 CTQ26473.1 - 1.1e-46 157.4 0.1 1.3e-46 157.3 0.1 1.0 1 0 0 1 1 1 1 Aspartate decarboxylase Pantoate_ligase PF02569.15 CTQ26474.1 - 2.9e-102 341.4 0.0 3.3e-102 341.3 0.0 1.0 1 0 0 1 1 1 1 Pantoate-beta-alanine ligase Pantoate_transf PF02548.15 CTQ26475.1 - 3.6e-104 347.7 0.3 4.1e-104 347.6 0.3 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase Asp_Glu_race PF01177.22 CTQ26475.1 - 0.0039 17.1 0.0 0.008 16.0 0.0 1.5 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase HPPK PF01288.20 CTQ26476.1 - 2.6e-36 124.5 0.0 3e-36 124.3 0.0 1.0 1 0 0 1 1 1 1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PolyA_pol_arg_C PF12626.7 CTQ26477.1 - 3.4e-42 143.3 2.7 6.8e-42 142.3 2.7 1.5 1 0 0 1 1 1 1 Polymerase A arginine-rich C-terminus PolyA_pol PF01743.20 CTQ26477.1 - 3.2e-39 134.3 0.4 9.3e-39 132.7 0.1 1.9 2 0 0 2 2 2 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 CTQ26477.1 - 6.4e-20 70.7 0.3 2e-19 69.1 0.1 2.0 2 0 0 2 2 2 1 Probable RNA and SrmB- binding site of polymerase A tRNA-synt_1c PF00749.21 CTQ26478.1 - 1.2e-44 152.5 0.0 1.7e-43 148.7 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain zf-dskA_traR PF01258.17 CTQ26479.1 - 1.7e-10 40.7 3.3 2.6e-10 40.1 3.3 1.3 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger Not3 PF04065.15 CTQ26479.1 - 0.039 13.4 2.2 0.85 9.0 2.3 2.1 1 1 1 2 2 2 0 Not1 N-terminal domain, CCR4-Not complex component DZR PF12773.7 CTQ26479.1 - 0.068 13.2 0.2 0.12 12.4 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon FAM165 PF14981.6 CTQ26479.1 - 0.14 12.0 0.7 3.3 7.6 0.0 2.4 2 0 0 2 2 2 0 FAM165 family SfsA PF03749.13 CTQ26480.1 - 7.2e-50 168.5 0.0 9.3e-50 168.1 0.0 1.1 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain SfsA_N PF17746.1 CTQ26480.1 - 4.1e-21 74.9 0.0 7.6e-21 74.0 0.0 1.4 1 0 0 1 1 1 1 SfsA N-terminal OB domain DUF3883 PF13020.6 CTQ26480.1 - 0.063 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3883) DUF1431 PF07248.12 CTQ26480.1 - 0.1 12.8 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1431) LigT_PEase PF02834.16 CTQ26481.1 - 1.4e-23 82.8 1.2 3.2e-13 49.7 0.1 2.6 2 1 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 CTQ26481.1 - 6.5e-12 45.6 0.1 7.7e-12 45.4 0.1 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily HrpB_C PF08482.10 CTQ26482.1 - 2.1e-54 183.5 1.2 5.1e-54 182.3 1.2 1.7 1 0 0 1 1 1 1 ATP-dependent helicase C-terminal Helicase_C PF00271.31 CTQ26482.1 - 6.5e-13 49.0 0.0 1.2e-12 48.2 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 CTQ26482.1 - 2e-09 37.5 0.0 3.8e-09 36.5 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase HA2 PF04408.23 CTQ26482.1 - 8.9e-09 35.6 0.2 2.4e-08 34.2 0.2 1.7 1 0 0 1 1 1 1 Helicase associated domain (HA2) DUF2732 PF10809.8 CTQ26482.1 - 0.48 10.3 0.0 0.48 10.3 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2732) DiS_P_DiS PF06750.13 CTQ26483.1 - 1.9e-29 101.6 0.1 4.4e-29 100.4 0.1 1.6 2 0 0 2 2 2 1 Bacterial Peptidase A24 N-terminal domain Peptidase_A24 PF01478.18 CTQ26483.1 - 4.7e-25 88.1 10.5 4.7e-25 88.1 10.5 2.4 3 0 0 3 3 3 1 Type IV leader peptidase family T2SSN PF01203.19 CTQ26484.1 - 6.7e-41 140.8 11.3 8.3e-41 140.5 11.3 1.1 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein N T2SSM PF04612.12 CTQ26485.1 - 1.9e-44 151.5 10.9 2.1e-44 151.4 10.9 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein M DUF4131 PF13567.6 CTQ26485.1 - 0.25 11.0 3.4 0.31 10.7 3.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) T2SSL PF05134.13 CTQ26486.1 - 6.4e-46 156.6 9.0 6.4e-46 156.6 9.0 1.6 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein L GspL_C PF12693.7 CTQ26486.1 - 3.5e-28 98.4 6.5 6.5e-28 97.6 6.5 1.5 1 0 0 1 1 1 1 GspL periplasmic domain T2SSK PF03934.13 CTQ26487.1 - 4.3e-81 272.4 6.8 5.1e-81 272.1 6.8 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein K T2SSJ PF11612.8 CTQ26488.1 - 8.6e-37 126.5 1.2 1.1e-36 126.1 1.2 1.1 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein J N_methyl PF07963.12 CTQ26488.1 - 2.6e-07 29.9 4.0 4.2e-07 29.3 4.0 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif T2SSI PF02501.17 CTQ26489.1 - 4.1e-25 87.7 5.8 6.2e-25 87.2 5.8 1.3 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein I N_methyl PF07963.12 CTQ26489.1 - 3.7e-08 32.6 5.0 5.4e-08 32.1 5.0 1.3 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif N_methyl PF07963.12 CTQ26490.1 - 1.6e-06 27.4 4.2 2.5e-06 26.8 4.2 1.3 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif T2SSG PF08334.11 CTQ26491.1 - 6.6e-37 125.9 0.1 7.7e-37 125.7 0.1 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein G N_methyl PF07963.12 CTQ26491.1 - 4.6e-10 38.6 3.4 6.9e-10 38.1 3.4 1.3 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif FUSC PF04632.12 CTQ26491.1 - 0.14 10.6 0.0 0.18 10.3 0.0 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family T2SSF PF00482.23 CTQ26492.1 - 4.4e-57 191.4 16.0 3.7e-32 110.9 1.2 2.4 2 0 0 2 2 2 2 Type II secretion system (T2SS), protein F DUF5383 PF17355.2 CTQ26492.1 - 0.15 12.4 2.1 1.8 8.9 0.4 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5383) T2SSE PF00437.20 CTQ26493.1 - 8.4e-92 307.1 4.2 1.1e-91 306.7 4.2 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 CTQ26493.1 - 0.0001 22.6 0.0 0.00025 21.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ26493.1 - 0.00036 21.0 0.6 0.00079 19.8 0.1 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 CTQ26493.1 - 0.00039 20.1 0.0 0.00096 18.9 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 CTQ26493.1 - 0.0046 16.7 0.0 0.0099 15.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 CTQ26493.1 - 0.0061 17.1 0.0 0.011 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 CTQ26493.1 - 0.0094 15.9 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain ABC_tran PF00005.27 CTQ26493.1 - 0.019 15.5 0.0 0.043 14.3 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_7 PF12775.7 CTQ26493.1 - 0.031 13.8 0.0 0.063 12.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_18 PF13238.6 CTQ26493.1 - 0.04 14.5 0.1 0.11 13.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 CTQ26493.1 - 0.041 14.2 0.0 0.12 12.7 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ26493.1 - 0.047 13.3 0.4 1.2 8.7 0.0 2.7 3 0 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 CTQ26493.1 - 0.059 13.3 0.1 0.54 10.1 0.0 2.2 1 1 1 2 2 2 0 NTPase ATPase_2 PF01637.18 CTQ26493.1 - 0.086 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Zeta_toxin PF06414.12 CTQ26493.1 - 0.087 12.1 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_14 PF13173.6 CTQ26493.1 - 0.092 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 CTQ26493.1 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_5 PF07728.14 CTQ26493.1 - 0.11 12.5 0.1 0.27 11.2 0.1 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) SMC_N PF02463.19 CTQ26493.1 - 0.24 10.8 0.0 0.38 10.1 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Secretin PF00263.21 CTQ26494.1 - 2.3e-50 170.5 5.1 4.6e-50 169.6 5.1 1.5 1 0 0 1 1 1 1 Bacterial type II and III secretion system protein Secretin_N PF03958.17 CTQ26494.1 - 7.8e-41 138.4 25.4 4.2e-17 62.3 1.1 4.3 4 1 0 4 4 4 3 Bacterial type II/III secretion system short domain Spore_YhcN_YlaJ PF09580.10 CTQ26494.1 - 7.9 6.5 7.3 3.1 7.9 0.2 3.2 3 0 0 3 3 3 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) T2SSC PF11356.8 CTQ26495.1 - 5.4e-23 81.4 0.0 9e-23 80.7 0.0 1.3 1 0 0 1 1 1 1 Type II secretion system protein C PDZ_2 PF13180.6 CTQ26495.1 - 3.6e-05 24.0 0.0 6.6e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 CTQ26495.1 - 7e-05 22.6 0.3 0.0004 20.2 0.1 2.1 2 0 0 2 2 2 1 PDZ domain Tricorn_PDZ PF14685.6 CTQ26495.1 - 0.019 14.9 0.0 0.046 13.7 0.0 1.6 2 0 0 2 2 2 0 Tricorn protease PDZ domain PDZ PF00595.24 CTQ26495.1 - 0.062 13.7 0.1 0.14 12.5 0.1 1.6 1 0 0 1 1 1 0 PDZ domain DUF3372 PF11852.8 CTQ26496.1 - 1.7e-47 161.0 0.0 3.4e-47 160.0 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3372) Pullulanase_Ins PF18494.1 CTQ26496.1 - 3.3e-35 120.4 2.0 7.8e-35 119.2 2.0 1.7 1 0 0 1 1 1 1 Pullulanase Ins domain Pullulanase_N2 PF17967.1 CTQ26496.1 - 3.5e-34 118.0 0.1 3.5e-34 118.0 0.1 2.8 4 0 0 4 4 4 1 Pullulanase N2 domain CBM_48 PF02922.18 CTQ26496.1 - 8.8e-19 67.6 0.3 2.1e-18 66.4 0.3 1.7 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PUD PF03714.14 CTQ26496.1 - 3e-10 40.8 0.5 1.3e-09 38.8 0.1 2.3 2 0 0 2 2 2 1 Bacterial pullanase-associated domain Alpha-amylase PF00128.24 CTQ26496.1 - 4e-06 26.6 0.9 0.01 15.4 0.2 2.8 2 1 0 3 3 3 2 Alpha amylase, catalytic domain hDGE_amylase PF14701.6 CTQ26496.1 - 0.0055 15.8 0.0 0.011 14.9 0.0 1.4 1 0 0 1 1 1 1 Glycogen debranching enzyme, glucanotransferase domain Collagen PF01391.18 CTQ26496.1 - 0.059 13.1 3.3 0.11 12.2 3.3 1.4 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) DUF3459 PF11941.8 CTQ26496.1 - 0.075 13.4 0.1 2 8.8 0.1 2.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3459) GHL5 PF14872.6 CTQ26496.1 - 0.082 10.9 0.1 0.12 10.3 0.1 1.1 1 0 0 1 1 1 0 Hypothetical glycoside hydrolase 5 T2SSB PF16537.5 CTQ26497.1 - 2.8e-20 71.7 0.0 3.9e-20 71.2 0.0 1.2 1 0 0 1 1 1 1 Type II secretion system protein B T2SS_PulS_OutS PF09691.10 CTQ26498.1 - 2.4e-35 120.9 0.5 2.8e-35 120.7 0.5 1.0 1 0 0 1 1 1 1 Type II secretion system pilotin lipoprotein (PulS_OutS) LPAM_1 PF08139.12 CTQ26498.1 - 0.033 14.7 0.5 0.065 13.7 0.5 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF1908 PF08926.11 CTQ26498.1 - 0.04 13.0 0.1 0.047 12.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) Transgly PF00912.22 CTQ26499.1 - 1.6e-54 184.0 0.0 3.1e-54 183.1 0.0 1.4 1 0 0 1 1 1 1 Transglycosylase PBP1_TM PF14812.6 CTQ26499.1 - 3.1e-29 101.2 5.2 3.1e-29 101.2 5.2 1.8 2 0 0 2 2 2 1 Transmembrane domain of transglycosylase PBP1 at N-terminal UB2H PF14814.6 CTQ26499.1 - 2e-28 98.2 0.2 3.9e-28 97.3 0.2 1.5 1 0 0 1 1 1 1 Bifunctional transglycosylase second domain Transpeptidase PF00905.22 CTQ26499.1 - 6.7e-27 94.5 0.9 1.7e-26 93.2 0.9 1.7 1 1 0 1 1 1 1 Penicillin binding protein transpeptidase domain UvrB_inter PF17757.1 CTQ26499.1 - 7.2e-07 29.3 0.1 1.6e-06 28.2 0.1 1.5 1 0 0 1 1 1 1 UvrB interaction domain DUF3484 PF11983.8 CTQ26499.1 - 0.088 13.9 7.6 0.46 11.6 6.4 2.7 2 0 0 2 2 2 0 Membrane-attachment and polymerisation-promoting switch TonB_dep_Rec PF00593.24 CTQ26500.1 - 1.6e-59 203.0 36.6 1.6e-59 203.0 36.6 1.9 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 CTQ26500.1 - 1.7e-22 80.0 0.6 4.4e-22 78.7 0.6 1.8 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain ABC_tran PF00005.27 CTQ26501.1 - 3.2e-32 111.9 0.0 4.1e-32 111.5 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 CTQ26501.1 - 1.1e-07 31.5 0.0 0.0026 17.2 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 CTQ26501.1 - 8.4e-07 29.1 0.2 0.0011 18.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ26501.1 - 0.0011 18.7 0.4 0.002 17.8 0.4 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ26501.1 - 0.0044 17.6 0.3 0.0061 17.1 0.3 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 CTQ26501.1 - 0.005 16.6 0.1 0.0072 16.1 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 CTQ26501.1 - 0.0051 15.7 0.3 1.9 7.2 0.0 2.1 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_22 PF13401.6 CTQ26501.1 - 0.023 15.0 0.5 0.16 12.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 CTQ26501.1 - 0.031 14.7 0.5 0.058 13.8 0.5 1.6 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ26501.1 - 0.038 13.9 0.0 0.062 13.2 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 CTQ26501.1 - 0.057 13.6 0.1 0.13 12.4 0.1 1.6 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 CTQ26501.1 - 0.12 12.2 0.0 4.3 7.0 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Peripla_BP_2 PF01497.18 CTQ26502.1 - 1.4e-28 100.1 0.0 1.7e-28 99.8 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein FecCD PF01032.18 CTQ26503.1 - 3.4e-140 466.5 77.3 2.5e-74 250.1 32.9 2.1 2 0 0 2 2 2 2 FecCD transport family DUF4574 PF15141.6 CTQ26503.1 - 6.7 6.7 7.1 15 5.6 0.4 3.6 3 0 0 3 3 3 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Aminotran_3 PF00202.21 CTQ26504.1 - 4.3e-80 269.4 0.0 5.3e-80 269.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 CTQ26504.1 - 0.00056 19.2 0.0 0.00094 18.4 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Voltage_CLC PF00654.20 CTQ26505.1 - 9.5e-94 314.5 38.5 1.3e-90 304.3 32.3 2.2 1 1 1 2 2 2 2 Voltage gated chloride channel Fe-S_biosyn PF01521.20 CTQ26506.1 - 1.4e-20 73.5 0.0 1.5e-20 73.4 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis UPF0126 PF03458.13 CTQ26507.1 - 2.8e-44 148.9 24.2 3e-24 84.7 7.5 2.3 2 0 0 2 2 2 2 UPF0126 domain AzlD PF05437.12 CTQ26507.1 - 0.035 14.3 2.2 0.035 14.3 2.2 3.2 2 2 1 3 3 3 0 Branched-chain amino acid transport protein (AzlD) TRIC PF05197.13 CTQ26507.1 - 0.039 13.5 2.2 0.18 11.3 2.2 2.1 1 1 0 1 1 1 0 TRIC channel Peripla_BP_2 PF01497.18 CTQ26508.1 - 6.7e-30 104.4 0.1 8.1e-30 104.1 0.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein DUF2397 PF09660.10 CTQ26508.1 - 0.026 13.4 0.4 0.036 13.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2397) DUF3391 PF11871.8 CTQ26508.1 - 0.047 14.2 0.1 0.067 13.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) PNP_UDP_1 PF01048.20 CTQ26509.1 - 2.6e-48 164.3 2.8 2.9e-48 164.1 2.8 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily HD_assoc PF13286.6 CTQ26510.1 - 2.1e-10 41.0 2.8 4.5e-05 23.9 0.4 3.5 2 1 1 3 3 3 2 Phosphohydrolase-associated domain HD PF01966.22 CTQ26510.1 - 3.5e-10 40.2 0.0 9.8e-10 38.7 0.0 1.8 1 0 0 1 1 1 1 HD domain Trypsin_2 PF13365.6 CTQ26511.1 - 9.9e-33 114.2 0.7 1.7e-32 113.4 0.7 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ PF00595.24 CTQ26511.1 - 3.7e-29 100.9 8.5 1.1e-15 57.7 0.2 3.1 3 0 0 3 3 3 2 PDZ domain PDZ_2 PF13180.6 CTQ26511.1 - 2e-28 98.6 1.7 1.7e-16 60.3 0.0 2.6 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 CTQ26511.1 - 3e-22 78.2 6.0 8.6e-11 41.5 0.1 3.3 3 1 1 4 4 4 2 PDZ domain Trypsin PF00089.26 CTQ26511.1 - 4.4e-20 72.5 0.3 7.5e-20 71.7 0.3 1.3 1 0 0 1 1 1 1 Trypsin PDZ_1 PF12812.7 CTQ26511.1 - 0.0014 18.6 0.1 2.5 8.2 0.1 2.7 2 0 0 2 2 2 2 PDZ-like domain Tricorn_PDZ PF14685.6 CTQ26511.1 - 0.0023 17.8 1.5 2 8.4 0.1 3.3 3 1 0 3 3 3 2 Tricorn protease PDZ domain DUF3394 PF11874.8 CTQ26511.1 - 0.0035 17.0 0.8 0.27 10.9 0.2 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF3394) Complex1_51K PF01512.17 CTQ26511.1 - 0.077 12.9 0.0 0.21 11.5 0.0 1.7 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase 51 Kd subunit SAF PF08666.12 CTQ26511.1 - 0.089 13.4 0.4 1.1 9.9 0.0 2.7 2 1 1 3 3 3 0 SAF domain Peptidase_S46 PF10459.9 CTQ26511.1 - 0.12 11.0 1.2 0.31 9.6 0.5 1.8 2 0 0 2 2 2 0 Peptidase S46 Diacid_rec PF05651.13 CTQ26512.1 - 4.3e-49 165.6 0.2 6.3e-49 165.1 0.2 1.3 1 0 0 1 1 1 1 Putative sugar diacid recognition HTH_30 PF13556.6 CTQ26512.1 - 1e-22 79.7 5.5 2.8e-22 78.3 1.9 2.7 3 0 0 3 3 3 1 PucR C-terminal helix-turn-helix domain GGDEF_2 PF17853.1 CTQ26512.1 - 5.5e-20 71.8 0.1 1.4e-19 70.4 0.1 1.8 1 0 0 1 1 1 1 GGDEF-like domain GAF_2 PF13185.6 CTQ26512.1 - 0.053 13.8 0.0 0.13 12.5 0.0 1.7 1 0 0 1 1 1 0 GAF domain DUF3461 PF11944.8 CTQ26513.1 - 2.3e-55 186.1 2.2 2.6e-55 185.9 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3461) FIN1 PF17300.2 CTQ26513.1 - 0.16 11.5 1.7 6.3 6.2 0.0 2.1 1 1 1 2 2 2 0 Filaments in between nuclei protein-1 THDPS_N_2 PF14805.6 CTQ26514.1 - 1.9e-25 88.8 0.6 3.1e-25 88.2 0.6 1.3 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal Hexapep_2 PF14602.6 CTQ26514.1 - 5.1e-13 48.5 6.7 7.8e-13 47.9 0.7 2.7 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 CTQ26514.1 - 6e-12 44.8 7.6 1.9e-06 27.4 0.3 3.4 2 1 1 3 3 3 2 Bacterial transferase hexapeptide (six repeats) GlnD_UR_UTase PF08335.11 CTQ26515.1 - 3.4e-33 114.8 0.7 3.4e-33 114.8 0.7 2.7 2 1 0 2 2 2 1 GlnD PII-uridylyltransferase ACT PF01842.25 CTQ26515.1 - 2.1e-19 69.0 0.2 6.1e-09 35.5 0.2 2.7 2 0 0 2 2 2 2 ACT domain HD PF01966.22 CTQ26515.1 - 2.8e-17 63.1 0.4 7.7e-17 61.7 0.4 1.8 1 0 0 1 1 1 1 HD domain NTP_transf_2 PF01909.23 CTQ26515.1 - 1.4e-07 31.7 0.0 3.7e-07 30.3 0.0 1.7 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF294 PF03445.13 CTQ26515.1 - 2.7e-05 24.0 0.0 8.6e-05 22.4 0.0 1.9 1 0 0 1 1 1 1 Putative nucleotidyltransferase DUF294 ACT_4 PF13291.6 CTQ26515.1 - 0.012 16.1 0.0 0.11 13.0 0.0 2.2 2 0 0 2 2 2 0 ACT domain Polbeta PF18765.1 CTQ26515.1 - 0.056 13.5 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase Peptidase_M24 PF00557.24 CTQ26516.1 - 1e-52 178.8 0.1 1.2e-52 178.7 0.1 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 CBM39 PF15886.5 CTQ26516.1 - 0.12 12.3 0.0 8.1 6.4 0.0 2.3 2 0 0 2 2 2 0 Carbohydrate binding domain (family 32) Ribosomal_S2 PF00318.20 CTQ26517.1 - 5.3e-94 313.4 0.0 6e-94 313.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S2 EF_TS PF00889.19 CTQ26518.1 - 1.6e-65 220.6 1.8 1.6e-65 220.6 1.8 1.5 2 0 0 2 2 2 1 Elongation factor TS AA_kinase PF00696.28 CTQ26519.1 - 5.8e-28 98.1 0.3 6.8e-28 97.9 0.3 1.1 1 0 0 1 1 1 1 Amino acid kinase family RRF PF01765.19 CTQ26520.1 - 1e-62 210.9 1.7 1.4e-62 210.4 1.7 1.2 1 0 0 1 1 1 1 Ribosome recycling factor DUF842 PF05811.13 CTQ26520.1 - 0.081 12.6 2.5 0.27 10.9 1.0 2.1 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF842) DXP_reductoisom PF02670.16 CTQ26521.1 - 5.6e-49 166.1 0.4 1.1e-48 165.2 0.4 1.5 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DXPR_C PF13288.6 CTQ26521.1 - 1.6e-39 134.7 0.0 3.6e-39 133.6 0.0 1.6 1 0 0 1 1 1 1 DXP reductoisomerase C-terminal domain DXP_redisom_C PF08436.12 CTQ26521.1 - 8.5e-37 125.2 0.0 2.2e-36 123.9 0.0 1.8 2 0 0 2 2 2 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DUF4265 PF14085.6 CTQ26521.1 - 0.035 14.1 0.1 0.095 12.7 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4265) EccE PF11203.8 CTQ26521.1 - 0.039 14.3 1.0 0.13 12.6 1.0 1.9 1 0 0 1 1 1 0 Putative type VII ESX secretion system translocon, EccE Peptidase_S9 PF00326.21 CTQ26521.1 - 0.089 12.3 0.0 0.23 10.9 0.0 1.6 2 0 0 2 2 2 0 Prolyl oligopeptidase family Prenyltransf PF01255.19 CTQ26522.1 - 2.4e-78 262.7 0.1 2.8e-78 262.5 0.1 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Glyco_hydro_97 PF10566.9 CTQ26522.1 - 0.089 12.1 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Glycoside hydrolase 97 Toprim_3 PF13362.6 CTQ26522.1 - 0.094 13.1 0.0 0.22 11.9 0.0 1.6 2 0 0 2 2 2 0 Toprim domain CTP_transf_1 PF01148.20 CTQ26523.1 - 1.3e-69 234.9 19.6 1.5e-69 234.7 19.6 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family CarS-like PF01864.17 CTQ26523.1 - 0.03 14.3 0.4 0.03 14.3 0.4 2.4 3 0 0 3 3 3 0 CDP-archaeol synthase Phage_holin_3_1 PF05106.12 CTQ26523.1 - 0.13 12.7 3.7 7.5 7.1 1.2 2.8 2 1 1 3 3 3 0 Phage holin family (Lysis protein S) DUF4199 PF13858.6 CTQ26523.1 - 8.9 6.7 19.0 0.31 11.4 4.7 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF4199) Peptidase_M50 PF02163.22 CTQ26524.1 - 7.1e-87 290.8 0.6 9e-87 290.5 0.6 1.1 1 0 0 1 1 1 1 Peptidase family M50 PDZ_6 PF17820.1 CTQ26524.1 - 4e-15 55.4 4.3 1.3e-11 44.1 0.2 2.7 2 0 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 CTQ26524.1 - 3.1e-12 46.6 0.2 1.2e-09 38.4 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 CTQ26524.1 - 5e-12 46.0 0.9 3.3e-09 37.0 0.0 2.3 2 0 0 2 2 2 2 PDZ domain Tricorn_PDZ PF14685.6 CTQ26524.1 - 0.00022 21.1 0.2 0.013 15.4 0.0 2.6 2 0 0 2 2 2 1 Tricorn protease PDZ domain DUF3394 PF11874.8 CTQ26524.1 - 0.042 13.5 0.1 0.12 12.1 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3394) Bac_surface_Ag PF01103.23 CTQ26525.1 - 2.1e-101 339.7 15.7 4.7e-101 338.5 15.7 1.6 1 0 0 1 1 1 1 Surface antigen POTRA PF07244.15 CTQ26525.1 - 1.8e-63 211.1 7.6 2.2e-15 57.0 0.1 5.3 5 0 0 5 5 5 5 Surface antigen variable number repeat POTRA_1 PF08478.10 CTQ26525.1 - 1.2e-06 28.8 0.1 0.1 12.9 0.0 4.4 5 0 0 5 5 5 3 POTRA domain, FtsQ-type POTRA_2 PF08479.11 CTQ26525.1 - 2.8e-06 27.1 0.9 0.053 13.4 0.0 5.3 6 0 0 6 6 6 1 POTRA domain, ShlB-type OmpH PF03938.14 CTQ26526.1 - 6.7e-25 88.0 12.7 7.6e-25 87.9 12.7 1.0 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) EC042_2821 PF18740.1 CTQ26526.1 - 0.064 13.1 1.8 0.09 12.6 1.4 1.4 1 1 0 1 1 1 0 EC042_2821-lke REase Histone PF00125.24 CTQ26526.1 - 0.064 13.6 3.9 0.092 13.1 3.9 1.2 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 Cytochrom_C_2 PF01322.20 CTQ26526.1 - 0.19 12.6 5.1 0.32 11.9 5.1 1.4 1 0 0 1 1 1 0 Cytochrome C' DUF2855 PF11017.8 CTQ26526.1 - 0.24 11.1 3.4 0.28 10.9 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) Siah-Interact_N PF09032.11 CTQ26526.1 - 0.63 10.4 6.3 2 8.8 1.0 2.7 1 1 2 3 3 3 0 Siah interacting protein, N terminal H-kinase_dim PF02895.14 CTQ26526.1 - 2.5 8.6 8.6 0.35 11.3 1.0 2.3 2 1 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain Hexapep PF00132.24 CTQ26527.1 - 1.7e-30 103.5 37.7 4.4e-10 38.9 3.6 5.6 4 1 2 6 6 6 6 Bacterial transferase hexapeptide (six repeats) LpxD PF04613.14 CTQ26527.1 - 2.1e-22 78.7 0.1 3.4e-22 78.0 0.1 1.4 1 0 0 1 1 1 1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Hexapep_2 PF14602.6 CTQ26527.1 - 4.9e-12 45.4 42.6 2.9e-07 30.1 8.8 5.8 3 2 1 4 4 4 3 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 CTQ26527.1 - 0.042 12.0 5.3 0.27 9.3 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4954) FabA PF07977.13 CTQ26528.1 - 8.3e-41 138.9 0.0 9.6e-41 138.6 0.0 1.0 1 0 0 1 1 1 1 FabA-like domain MaoC_dehydratas PF01575.19 CTQ26528.1 - 0.022 14.3 0.0 0.037 13.6 0.0 1.4 1 0 0 1 1 1 0 MaoC like domain 4HBT PF03061.22 CTQ26528.1 - 0.038 14.3 0.0 0.068 13.5 0.0 1.5 1 1 0 1 1 1 0 Thioesterase superfamily PS-DH PF14765.6 CTQ26528.1 - 0.083 12.1 0.0 0.16 11.2 0.0 1.5 1 1 1 2 2 2 0 Polyketide synthase dehydratase Acetyltransf_11 PF13720.6 CTQ26529.1 - 3.1e-31 107.7 0.0 5.5e-31 106.9 0.0 1.4 1 0 0 1 1 1 1 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Hexapep PF00132.24 CTQ26529.1 - 2.5e-26 90.4 24.6 1.1e-08 34.4 7.7 5.6 2 2 4 6 6 6 6 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 CTQ26529.1 - 0.00017 21.3 15.4 0.0014 18.3 2.4 4.1 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 CTQ26529.1 - 0.0018 17.3 0.4 0.37 9.7 0.0 2.1 1 1 1 2 2 2 2 L-fucokinase LpxB PF02684.15 CTQ26530.1 - 2.8e-151 503.6 0.0 3.2e-151 503.4 0.0 1.0 1 0 0 1 1 1 1 Lipid-A-disaccharide synthetase RNase_HII PF01351.18 CTQ26531.1 - 4.2e-38 131.2 0.0 4.8e-38 131.0 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII DNA_pol3_alpha PF07733.12 CTQ26532.1 - 2.7e-104 348.3 0.0 6.4e-104 347.1 0.0 1.6 2 0 0 2 2 2 1 Bacterial DNA polymerase III alpha NTPase domain DNA_pol3_finger PF17657.1 CTQ26532.1 - 1.4e-66 223.0 0.0 2.4e-66 222.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain PHP PF02811.19 CTQ26532.1 - 2.1e-38 132.3 0.0 8.3e-38 130.3 0.0 2.0 2 0 0 2 2 2 1 PHP domain HHH_6 PF14579.6 CTQ26532.1 - 2.5e-25 88.6 0.0 6.7e-25 87.2 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif tRNA_anti-codon PF01336.25 CTQ26532.1 - 9.2e-09 35.2 0.1 1.9e-08 34.2 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain ACCA PF03255.14 CTQ26533.1 - 5.1e-62 208.0 0.1 7.8e-62 207.4 0.1 1.3 1 0 0 1 1 1 1 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Carboxyl_trans PF01039.22 CTQ26533.1 - 1.5e-17 63.5 0.1 1.7e-17 63.2 0.1 1.1 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 CTQ26533.1 - 0.00036 20.1 0.0 0.00052 19.6 0.0 1.2 1 0 0 1 1 1 1 Malonate decarboxylase gamma subunit (MdcE) Med9 PF07544.13 CTQ26533.1 - 0.065 13.3 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 OKR_DC_1 PF01276.20 CTQ26534.1 - 5e-191 634.9 0.0 6.1e-191 634.6 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.15 CTQ26534.1 - 2.6e-46 157.2 0.0 5.2e-46 156.2 0.0 1.5 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain OKR_DC_1_N PF03709.15 CTQ26534.1 - 5.2e-27 94.3 0.0 1.2e-26 93.2 0.0 1.7 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, N-terminal domain Glyoxalase PF00903.25 CTQ26535.1 - 1.8e-22 79.9 0.0 2e-22 79.8 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 CTQ26535.1 - 5e-14 52.5 0.0 5.9e-14 52.3 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 CTQ26535.1 - 4.2e-08 33.5 0.0 5.2e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 CTQ26535.1 - 2.1e-06 28.5 0.0 3.4e-06 27.8 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 CTQ26535.1 - 0.00018 21.4 0.0 0.00028 20.8 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase-like domain ATP_bind_3 PF01171.20 CTQ26536.1 - 1.6e-57 194.2 0.0 2.1e-57 193.8 0.0 1.1 1 0 0 1 1 1 1 PP-loop family TilS_C PF11734.8 CTQ26536.1 - 1.5e-23 82.0 0.0 1.5e-23 82.0 0.0 2.1 2 0 0 2 2 2 1 TilS substrate C-terminal domain TilS PF09179.11 CTQ26536.1 - 5.1e-20 71.7 5.3 5.1e-20 71.7 5.3 2.8 4 0 0 4 4 4 1 TilS substrate binding domain PAPS_reduct PF01507.19 CTQ26536.1 - 0.18 11.8 0.0 0.38 10.8 0.0 1.6 1 1 1 2 2 2 0 Phosphoadenosine phosphosulfate reductase family ROF PF07073.12 CTQ26537.1 - 2e-26 92.0 0.1 2.2e-26 91.8 0.1 1.0 1 0 0 1 1 1 1 Modulator of Rho-dependent transcription termination (ROF) UPF0253 PF06786.12 CTQ26538.1 - 5.1e-36 122.8 1.5 5.6e-36 122.6 1.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0253) YaeQ PF07152.12 CTQ26539.1 - 5.5e-70 234.5 1.1 6.2e-70 234.3 1.1 1.0 1 0 0 1 1 1 1 YaeQ protein BRX PF08381.11 CTQ26539.1 - 0.029 13.7 1.2 0.071 12.5 1.2 1.6 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 RF-1 PF00472.20 CTQ26540.1 - 9.4e-23 80.4 1.1 1.2e-22 80.0 1.1 1.0 1 0 0 1 1 1 1 RF-1 domain DUF3886 PF13025.6 CTQ26540.1 - 1.4 9.1 5.6 2.3 8.5 5.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3886) NlpE_C PF17185.4 CTQ26541.1 - 2e-32 111.3 0.1 5.4e-32 109.9 0.1 1.8 2 0 0 2 2 2 1 NlpE C-terminal OB domain NlpE PF04170.12 CTQ26541.1 - 5.1e-26 91.4 0.0 1.9e-25 89.6 0.0 1.9 2 1 0 2 2 2 1 NlpE N-terminal domain Lipocalin_4 PF13648.6 CTQ26541.1 - 0.056 14.4 0.0 0.39 11.7 0.0 2.1 2 0 0 2 2 2 0 Lipocalin-like domain Peptidase_C92 PF05708.12 CTQ26542.1 - 4.3e-11 43.2 0.0 1.3e-08 35.1 0.0 2.1 2 0 0 2 2 2 2 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family NLPC_P60 PF00877.19 CTQ26542.1 - 6.4e-08 32.6 0.0 8.1e-05 22.6 0.0 2.5 2 1 0 2 2 2 2 NlpC/P60 family tRNA-synt_2b PF00587.25 CTQ26543.1 - 2e-50 171.3 0.0 2.8e-50 170.8 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA_edit PF04073.15 CTQ26543.1 - 8.4e-27 93.7 0.1 1.5e-26 92.8 0.1 1.5 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain HGTP_anticodon PF03129.20 CTQ26543.1 - 4.1e-21 74.9 0.1 8.9e-21 73.9 0.1 1.6 1 0 0 1 1 1 1 Anticodon binding domain TIR_2 PF13676.6 CTQ26543.1 - 0.17 12.5 0.0 0.8 10.3 0.0 2.1 2 0 0 2 2 2 0 TIR domain TrmO PF01980.16 CTQ26544.1 - 1.8e-44 150.8 0.0 2.7e-44 150.2 0.0 1.2 1 0 0 1 1 1 1 tRNA-methyltransferase O TrmO_C PF18389.1 CTQ26544.1 - 1.6e-23 82.6 0.1 2.2e-23 82.1 0.1 1.2 1 0 0 1 1 1 1 TrmO C-terminal domain OSK PF17182.4 CTQ26544.1 - 0.091 12.0 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 OSK domain RcsF PF16358.5 CTQ26545.1 - 2.8e-49 165.8 0.1 3.5e-49 165.4 0.1 1.1 1 0 0 1 1 1 1 RcsF lipoprotein DUF5006 PF16397.5 CTQ26545.1 - 0.28 10.3 0.2 0.39 9.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5006) Lipoprotein_9 PF03180.14 CTQ26546.1 - 8.2e-101 336.0 1.7 9.3e-101 335.9 1.7 1.0 1 0 0 1 1 1 1 NLPA lipoprotein OpuAC PF04069.12 CTQ26546.1 - 6.9e-05 22.5 1.2 8e-05 22.3 0.2 1.5 2 1 0 2 2 2 1 Substrate binding domain of ABC-type glycine betaine transport system Phosphonate-bd PF12974.7 CTQ26546.1 - 0.00056 19.6 0.1 0.0014 18.3 0.0 1.6 2 0 0 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.11 CTQ26546.1 - 0.011 15.7 0.1 0.21 11.5 0.0 2.1 2 0 0 2 2 2 0 NMT1/THI5 like FMN_red PF03358.15 CTQ26546.1 - 0.092 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 NADPH-dependent FMN reductase BPD_transp_1 PF00528.22 CTQ26547.1 - 1.4e-20 73.8 19.0 1.4e-20 73.8 19.0 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 CTQ26548.1 - 5e-37 127.5 0.0 8.2e-37 126.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter NIL PF09383.10 CTQ26548.1 - 9.3e-20 70.3 0.0 1.8e-19 69.4 0.0 1.5 1 0 0 1 1 1 1 NIL domain AAA_21 PF13304.6 CTQ26548.1 - 2.5e-09 37.4 0.3 0.00019 21.4 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26548.1 - 6.8e-07 28.9 0.0 1.4e-06 27.9 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ26548.1 - 4e-05 23.9 0.6 0.00025 21.3 0.6 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ26548.1 - 0.00051 20.5 1.4 0.001 19.4 0.5 1.9 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 CTQ26548.1 - 0.0055 16.4 0.0 0.012 15.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 CTQ26548.1 - 0.0076 15.8 0.0 2.9 7.4 0.0 2.8 3 0 0 3 3 3 1 AAA domain RsgA_GTPase PF03193.16 CTQ26548.1 - 0.015 15.2 0.1 0.029 14.3 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase SbcCD_C PF13558.6 CTQ26548.1 - 0.026 14.8 0.1 0.22 11.8 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TniB PF05621.11 CTQ26548.1 - 0.027 13.9 0.0 0.57 9.6 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein MMR_HSR1 PF01926.23 CTQ26548.1 - 0.039 14.0 0.3 0.2 11.7 0.3 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase ABC_ATPase PF09818.9 CTQ26548.1 - 0.079 11.7 0.1 3.1 6.5 0.0 2.3 2 1 0 2 2 2 0 Predicted ATPase of the ABC class MeaB PF03308.16 CTQ26548.1 - 0.093 11.7 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_23 PF13476.6 CTQ26548.1 - 0.14 12.7 0.1 0.24 11.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain Hydrolase_like PF13242.6 CTQ26549.1 - 1.9e-13 50.2 0.1 4e-13 49.2 0.1 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 CTQ26549.1 - 4.8e-11 43.1 0.1 1.3e-05 25.4 0.0 2.2 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ26549.1 - 4e-08 33.8 0.1 2.5e-07 31.2 0.0 2.2 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 CTQ26549.1 - 2.1e-07 30.8 0.0 4.2e-07 29.8 0.0 1.4 1 1 1 2 2 2 1 Polynucleotide kinase 3 phosphatase Hydrolase_6 PF13344.6 CTQ26549.1 - 3e-05 24.1 0.0 0.00013 22.0 0.0 1.9 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Aldo_ket_red PF00248.21 CTQ26550.1 - 1.6e-53 181.8 0.3 2.7e-51 174.5 0.3 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Sacchrp_dh_NADP PF03435.18 CTQ26550.1 - 0.034 14.4 0.3 0.63 10.3 0.0 2.9 2 1 2 4 4 4 0 Saccharopine dehydrogenase NADP binding domain GlutR_dimer PF00745.20 CTQ26550.1 - 0.13 12.7 0.6 1.6 9.3 0.0 2.4 2 0 0 2 2 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain LysR_substrate PF03466.20 CTQ26551.1 - 3.9e-45 153.8 0.0 5.9e-45 153.2 0.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26551.1 - 8.7e-22 76.8 1.8 3.5e-21 74.9 1.2 2.2 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 CTQ26551.1 - 0.02 14.4 0.0 0.12 12.0 0.1 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding CHASE3 PF05227.13 CTQ26551.1 - 0.06 13.3 1.6 0.12 12.3 1.6 1.4 1 0 0 1 1 1 0 CHASE3 domain MarR_2 PF12802.7 CTQ26551.1 - 0.084 12.8 0.1 0.2 11.5 0.1 1.7 1 0 0 1 1 1 0 MarR family MFS_1 PF07690.16 CTQ26552.1 - 4.5e-49 167.3 72.9 1.2e-39 136.3 46.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ26552.1 - 1.2e-13 51.2 43.6 1.4e-13 50.9 43.6 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Sugar_tr PF00083.24 CTQ26552.1 - 2.9e-09 36.3 37.8 5.7e-08 32.0 14.2 3.2 2 1 1 3 3 3 2 Sugar (and other) transporter Exo_endo_phos PF03372.23 CTQ26553.1 - 3.2e-07 30.1 2.4 1.8e-06 27.7 2.4 2.0 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 CTQ26553.1 - 0.04 13.8 0.0 0.1 12.5 0.0 1.7 2 0 0 2 2 2 0 Endonuclease-reverse transcriptase Methyltransf_11 PF08241.12 CTQ26554.1 - 5e-27 94.4 0.1 8.6e-27 93.6 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ26554.1 - 2.5e-24 85.8 0.1 4.8e-24 84.9 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ26554.1 - 1.8e-23 83.2 0.0 2.5e-23 82.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ26554.1 - 6.3e-23 81.2 0.0 9.6e-23 80.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 CTQ26554.1 - 1.8e-19 70.0 0.0 2.4e-19 69.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 CTQ26554.1 - 5.1e-15 56.0 0.0 9.1e-15 55.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ26554.1 - 7e-09 35.5 0.0 1.1e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_29 PF03141.16 CTQ26554.1 - 6.6e-08 31.6 0.0 8.5e-08 31.2 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_8 PF05148.15 CTQ26554.1 - 7.2e-08 32.5 0.0 6.9e-07 29.3 0.0 2.0 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_9 PF08003.11 CTQ26554.1 - 1e-06 27.9 0.0 1.4e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MetW PF07021.12 CTQ26554.1 - 5.3e-06 26.2 0.0 8.9e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW DREV PF05219.12 CTQ26554.1 - 6.3e-06 25.5 0.0 8.5e-06 25.0 0.0 1.1 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_2 PF00891.18 CTQ26554.1 - 9.2e-06 25.1 0.1 1.2e-05 24.8 0.1 1.1 1 0 0 1 1 1 1 O-methyltransferase domain TehB PF03848.14 CTQ26554.1 - 1.9e-05 24.2 0.0 2.6e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB PrmA PF06325.13 CTQ26554.1 - 3.6e-05 23.3 0.0 6e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 CTQ26554.1 - 0.00039 19.8 0.0 0.00062 19.1 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 CTQ26554.1 - 0.0048 16.9 0.0 0.0073 16.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 CTQ26554.1 - 0.0066 17.4 0.1 0.014 16.4 0.1 1.7 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 CTQ26554.1 - 0.013 14.6 0.0 0.014 14.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.17 CTQ26554.1 - 0.023 14.2 0.0 0.1 12.1 0.0 1.9 1 1 0 1 1 1 0 Putative methyltransferase NodS PF05401.11 CTQ26554.1 - 0.031 13.9 0.0 0.043 13.4 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) TPMT PF05724.11 CTQ26554.1 - 0.032 13.9 0.1 0.05 13.2 0.1 1.4 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) PCMT PF01135.19 CTQ26554.1 - 0.088 12.5 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF3100 PF11299.8 CTQ26554.1 - 0.12 11.8 0.3 0.18 11.2 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3100) NNMT_PNMT_TEMT PF01234.17 CTQ26554.1 - 0.15 11.3 0.0 0.57 9.3 0.0 1.8 1 1 1 2 2 2 0 NNMT/PNMT/TEMT family SLT PF01464.20 CTQ26555.1 - 9.6e-29 99.4 0.0 1.5e-28 98.8 0.0 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain LysM PF01476.20 CTQ26555.1 - 3.8e-28 97.3 0.1 2e-13 50.2 0.2 3.4 3 0 0 3 3 3 2 LysM domain HTH_Tnp_1 PF01527.20 CTQ26555.1 - 0.0051 17.1 0.0 3.4 8.0 0.0 2.7 2 0 0 2 2 2 2 Transposase DUF3071 PF11268.8 CTQ26555.1 - 0.014 15.4 0.0 3.5 7.7 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3071) HTH_23 PF13384.6 CTQ26555.1 - 0.03 14.1 0.5 12 5.8 0.1 2.8 2 0 0 2 2 2 0 Homeodomain-like domain OapA PF04225.12 CTQ26555.1 - 0.049 13.7 0.1 2.1 8.5 0.0 2.8 2 0 0 2 2 2 0 Opacity-associated protein A LysM-like domain HTH_28 PF13518.6 CTQ26555.1 - 0.098 12.8 0.2 25 5.1 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain MerR_1 PF13411.6 CTQ26555.1 - 0.11 12.7 0.0 10 6.3 0.0 3.1 3 0 0 3 3 3 0 MerR HTH family regulatory protein MLTD_N PF06474.12 CTQ26555.1 - 0.59 10.3 2.6 0.5 10.6 0.8 1.8 2 0 0 2 2 2 0 MltD lipid attachment motif HAGH_C PF16123.5 CTQ26556.1 - 1.5e-23 83.1 0.7 2.4e-23 82.4 0.7 1.3 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 CTQ26556.1 - 1.2e-21 77.6 0.0 5.8e-20 72.1 0.0 2.2 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 CTQ26556.1 - 2.2e-06 27.3 0.0 3.8e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 CTQ26556.1 - 0.00037 20.4 0.0 0.00056 19.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 CTQ26556.1 - 0.022 14.2 0.0 0.13 11.7 0.0 2.0 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily domain Methyltransf_11 PF08241.12 CTQ26557.1 - 1e-09 38.9 0.0 1.6e-09 38.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ26557.1 - 0.0025 18.5 0.0 0.004 17.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain LysR_substrate PF03466.20 CTQ26560.1 - 1.3e-42 145.5 0.2 1.6e-42 145.2 0.2 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26560.1 - 3.2e-18 65.4 0.1 3.2e-18 65.4 0.1 1.7 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family LysE PF01810.18 CTQ26561.1 - 2.2e-10 40.3 15.7 2.9e-10 39.9 15.7 1.2 1 0 0 1 1 1 1 LysE type translocator CN_hydrolase PF00795.22 CTQ26562.1 - 8.3e-32 110.5 0.1 9.4e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF1974 PF09317.11 CTQ26563.1 - 5.9e-119 396.8 0.0 7.9e-119 396.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1974) Acyl-CoA_dh_N PF02771.16 CTQ26563.1 - 2e-17 63.9 0.1 7.2e-17 62.1 0.1 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_1 PF00441.24 CTQ26563.1 - 2.2e-12 47.5 2.4 4.9e-12 46.3 2.4 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 CTQ26563.1 - 2.9e-09 37.0 0.0 5.5e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain SIS_2 PF13580.6 CTQ26564.1 - 9.1e-32 110.0 0.2 1.2e-31 109.5 0.2 1.2 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 CTQ26564.1 - 8.7e-08 32.1 0.0 1.6e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 SIS domain Antibiotic_NAT PF02522.14 CTQ26564.1 - 0.12 12.2 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Aminoglycoside 3-N-acetyltransferase GATase_4 PF13230.6 CTQ26565.1 - 8.1e-67 225.0 0.0 8.8e-67 224.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.6 CTQ26565.1 - 0.095 12.9 0.0 0.21 11.8 0.0 1.7 2 0 0 2 2 2 0 Glutamine amidotransferase domain YkuD PF03734.14 CTQ26566.1 - 1.3e-06 28.9 0.2 2.9e-06 27.7 0.0 1.5 1 1 1 2 2 2 1 L,D-transpeptidase catalytic domain NQRA PF05896.11 CTQ26568.1 - 1.3e-108 362.3 0.0 1.6e-108 362.0 0.0 1.1 1 0 0 1 1 1 1 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NQRA_SLBB PF11973.8 CTQ26568.1 - 3.7e-22 78.7 0.5 7.9e-22 77.6 0.5 1.6 1 0 0 1 1 1 1 NQRA C-terminal domain RnfC_N PF13375.6 CTQ26568.1 - 7.2e-07 29.1 0.1 1.3e-06 28.3 0.1 1.4 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Biotin_lipoyl_2 PF13533.6 CTQ26568.1 - 0.00019 21.2 0.2 0.0006 19.6 0.0 1.9 2 0 0 2 2 2 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 CTQ26568.1 - 0.036 13.9 0.1 0.092 12.6 0.1 1.6 1 1 0 1 1 1 0 Biotin-requiring enzyme NQR2_RnfD_RnfE PF03116.15 CTQ26569.1 - 1.2e-107 359.7 27.0 1.3e-107 359.5 27.0 1.0 1 0 0 1 1 1 1 NQR2, RnfD, RnfE family FMN_bind PF04205.14 CTQ26570.1 - 6.4e-15 55.5 0.0 1.3e-14 54.5 0.0 1.5 1 0 0 1 1 1 1 FMN-binding domain Rnf-Nqr PF02508.14 CTQ26571.1 - 1e-59 201.5 15.8 1.1e-59 201.3 15.8 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein ICE2 PF08426.10 CTQ26571.1 - 0.24 10.5 7.5 0.49 9.5 6.7 1.7 1 1 1 2 2 2 0 ICE2 YrhC PF14143.6 CTQ26571.1 - 0.35 11.0 3.6 2.3 8.4 0.0 2.9 3 0 0 3 3 3 0 YrhC-like protein Rnf-Nqr PF02508.14 CTQ26572.1 - 7.4e-59 198.6 18.3 8.3e-59 198.5 18.3 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein DUF2456 PF10445.9 CTQ26572.1 - 0.67 10.1 5.6 2.7 8.1 0.2 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2456) NAD_binding_1 PF00175.21 CTQ26573.1 - 1.6e-17 64.1 0.0 2.6e-17 63.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain Fer2 PF00111.27 CTQ26573.1 - 1.5e-10 40.9 0.8 2.5e-10 40.2 0.8 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 CTQ26573.1 - 1.1e-09 38.5 0.0 5.5e-09 36.3 0.0 2.0 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 CTQ26573.1 - 0.0018 18.4 0.0 0.029 14.5 0.0 2.2 2 0 0 2 2 2 1 Ferric reductase NAD binding domain PDZ PF00595.24 CTQ26573.1 - 0.023 15.0 0.0 0.063 13.6 0.0 1.8 1 0 0 1 1 1 0 PDZ domain Fer2_4 PF13510.6 CTQ26573.1 - 0.1 12.7 0.5 0.39 10.8 0.5 2.0 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain FAD_binding_9 PF08021.11 CTQ26573.1 - 0.13 12.5 0.0 0.22 11.7 0.0 1.4 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain HPS3_C PF14763.6 CTQ26573.1 - 0.18 11.1 0.0 0.34 10.2 0.0 1.4 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3, C-terminal NqrM PF04400.13 CTQ26574.1 - 8.6e-22 76.6 1.6 1.1e-21 76.3 1.6 1.1 1 0 0 1 1 1 1 (Na+)-NQR maturation NqrM PetM PF08041.11 CTQ26574.1 - 0.0042 16.6 4.2 0.0068 16.0 4.2 1.3 1 0 0 1 1 1 1 PetM family of cytochrome b6f complex subunit 7 DUF5345 PF17280.2 CTQ26574.1 - 4.7 7.2 5.5 8.9 6.4 1.2 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5345) GDPD PF03009.17 CTQ26575.1 - 4.9e-22 78.9 0.0 7.2e-22 78.4 0.0 1.3 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family FMN_dh PF01070.18 CTQ26575.1 - 0.00016 20.9 0.0 0.00034 19.7 0.0 1.5 2 0 0 2 2 2 1 FMN-dependent dehydrogenase SH3_16 PF18348.1 CTQ26575.1 - 0.012 15.4 0.0 7.7 6.4 0.0 2.5 2 0 0 2 2 2 0 Bacterial dipeptidyl-peptidase Sh3 domain ThiG PF05690.14 CTQ26575.1 - 0.14 11.4 0.0 0.28 10.5 0.0 1.4 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG IMS PF00817.20 CTQ26576.1 - 1.3e-48 164.8 0.0 1.8e-48 164.3 0.0 1.2 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 CTQ26576.1 - 7.2e-10 39.6 0.0 1.4e-09 38.7 0.0 1.5 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 CTQ26576.1 - 3.6e-06 27.0 0.0 9.2e-06 25.7 0.0 1.7 1 0 0 1 1 1 1 IMS family HHH motif DNA_pol_lambd_f PF10391.9 CTQ26576.1 - 0.0045 16.8 0.0 0.01 15.6 0.0 1.6 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 CTQ26576.1 - 0.009 16.2 0.0 0.018 15.3 0.0 1.4 1 0 0 1 1 1 1 Pathogenicity locus DUF4332 PF14229.6 CTQ26576.1 - 0.026 14.8 0.0 0.042 14.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) Acetyltransf_10 PF13673.7 CTQ26577.1 - 1.3e-17 63.9 0.0 1.6e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ26577.1 - 5.7e-08 33.1 0.0 8e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ26577.1 - 2.9e-05 24.3 0.0 4.4e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Peptidase_M20 PF01546.28 CTQ26578.1 - 5.1e-20 72.1 0.0 8.9e-20 71.3 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ26578.1 - 6.1e-10 39.0 0.0 1.3e-08 34.7 0.0 2.3 2 0 0 2 2 2 1 Peptidase dimerisation domain Pribosyltran PF00156.27 CTQ26579.1 - 4.3e-15 55.6 0.0 5.3e-15 55.3 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain DUF1357 PF07094.11 CTQ26579.1 - 0.26 11.3 0.0 0.34 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1357) DUF1100 PF06500.11 CTQ26580.1 - 9.5e-201 666.9 0.0 1.1e-200 666.7 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1100) AXE1 PF05448.12 CTQ26580.1 - 0.0058 15.3 0.0 0.24 10.0 0.0 2.3 2 1 1 3 3 3 2 Acetyl xylan esterase (AXE1) DLH PF01738.18 CTQ26580.1 - 0.15 11.6 0.0 0.42 10.1 0.0 1.7 2 0 0 2 2 2 0 Dienelactone hydrolase family Crl PF07417.12 CTQ26581.1 - 4.7e-52 175.1 0.2 5.2e-52 175.0 0.2 1.0 1 0 0 1 1 1 1 Sigma factor-binding transcriptional regulator Crl DUF1471 PF07338.13 CTQ26582.1 - 3.7e-08 33.2 1.0 6.8e-08 32.4 1.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) Polyketide_cyc2 PF10604.9 CTQ26583.1 - 1.2e-27 96.9 0.0 1.3e-27 96.8 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 CTQ26583.1 - 0.00042 20.5 0.0 0.00045 20.4 0.0 1.3 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DCX PF03607.17 CTQ26583.1 - 0.0065 16.5 0.0 0.015 15.4 0.0 1.6 2 0 0 2 2 2 1 Doublecortin adh_short_C2 PF13561.6 CTQ26584.1 - 8.6e-41 140.0 1.6 3e-40 138.2 1.6 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ26584.1 - 9.6e-36 123.1 0.7 1.3e-35 122.7 0.7 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ26584.1 - 2e-06 27.8 0.5 3.9e-06 26.9 0.2 1.6 1 1 1 2 2 2 1 KR domain 3HCDH_N PF02737.18 CTQ26584.1 - 2.1e-05 24.5 1.3 0.014 15.2 0.3 2.2 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Epimerase PF01370.21 CTQ26584.1 - 0.12 11.8 0.4 0.28 10.6 0.1 1.7 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family Aldo_ket_red PF00248.21 CTQ26585.1 - 1.3e-48 165.7 0.0 1.6e-48 165.4 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family LysR_substrate PF03466.20 CTQ26586.1 - 2.8e-38 131.4 3.1 4.8e-38 130.6 3.1 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26586.1 - 2.5e-22 78.6 2.0 4e-22 77.9 1.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family ParA PF10609.9 CTQ26586.1 - 0.018 14.5 0.0 0.028 13.9 0.0 1.2 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase HTH_24 PF13412.6 CTQ26586.1 - 0.025 14.1 0.1 0.067 12.8 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_30 PF13556.6 CTQ26586.1 - 0.033 14.0 0.1 0.09 12.6 0.1 1.7 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Mga PF05043.13 CTQ26586.1 - 0.11 13.1 0.1 0.21 12.2 0.1 1.4 1 0 0 1 1 1 0 Mga helix-turn-helix domain FCD PF07729.12 CTQ26588.1 - 3.2e-24 85.8 12.8 4.8e-24 85.2 12.8 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 CTQ26588.1 - 3.7e-13 48.9 0.0 1.2e-12 47.2 0.0 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family DUF480 PF04337.12 CTQ26588.1 - 0.0027 17.8 0.0 0.0042 17.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF480 HTH_41 PF14502.6 CTQ26588.1 - 0.11 12.2 0.0 0.24 11.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Pox_A32 PF04665.12 CTQ26588.1 - 0.11 11.9 0.0 0.17 11.3 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A32 protein AA_permease PF00324.21 CTQ26589.1 - 1.3e-124 416.4 47.2 1.5e-124 416.3 47.2 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ26589.1 - 2e-38 132.4 46.6 2.2e-38 132.2 46.6 1.0 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 CTQ26589.1 - 5.8e-05 22.1 19.7 5.8e-05 22.1 19.7 3.1 2 2 0 2 2 2 1 Spore germination protein Aminotran_3 PF00202.21 CTQ26590.1 - 2.7e-144 480.8 0.1 3.1e-144 480.6 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 CTQ26590.1 - 0.014 14.6 0.1 0.047 12.9 0.1 1.8 1 1 0 1 1 1 0 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 CTQ26590.1 - 0.12 11.7 0.2 0.27 10.5 0.2 1.5 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Aldedh PF00171.22 CTQ26591.1 - 2.6e-176 586.7 0.1 2.9e-176 586.5 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 CTQ26591.1 - 0.24 10.8 0.0 1 8.8 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1487) TilS PF09179.11 CTQ26591.1 - 0.25 11.9 1.0 0.54 10.8 1.0 1.5 1 0 0 1 1 1 0 TilS substrate binding domain DAO PF01266.24 CTQ26592.1 - 1.6e-68 231.9 0.1 2.1e-68 231.5 0.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 CTQ26592.1 - 2.2e-05 23.8 0.7 0.15 11.2 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Mqo PF06039.15 CTQ26592.1 - 2.7e-05 22.9 0.0 0.0067 15.0 0.0 2.3 2 1 0 2 2 2 2 Malate:quinone oxidoreductase (Mqo) Pyr_redox PF00070.27 CTQ26592.1 - 0.00016 22.1 0.3 0.37 11.4 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 CTQ26592.1 - 0.00027 21.0 0.1 0.21 11.6 0.0 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 CTQ26592.1 - 0.0014 17.8 1.0 0.0042 16.2 1.0 1.7 1 1 0 1 1 1 1 FAD binding domain Amino_oxidase PF01593.24 CTQ26592.1 - 0.0036 16.6 0.0 0.0054 16.1 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 CTQ26592.1 - 0.0056 16.9 0.1 0.017 15.3 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 CTQ26592.1 - 0.0068 15.2 0.3 2.5 6.7 0.0 2.1 2 0 0 2 2 2 2 HI0933-like protein Lycopene_cycl PF05834.12 CTQ26592.1 - 0.021 13.9 0.2 0.97 8.4 0.1 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein Trp_halogenase PF04820.14 CTQ26592.1 - 0.023 13.6 0.3 0.55 9.0 0.0 2.0 2 0 0 2 2 2 0 Tryptophan halogenase Pyr_redox_3 PF13738.6 CTQ26592.1 - 0.039 13.2 2.0 0.95 8.6 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 CTQ26592.1 - 0.1 11.8 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Thi4 family CsiD PF08943.10 CTQ26593.1 - 1.6e-149 496.9 0.0 1.8e-149 496.7 0.0 1.0 1 0 0 1 1 1 1 CsiD TauD PF02668.16 CTQ26593.1 - 3.1e-08 33.8 0.1 1.3e-07 31.7 0.1 1.8 1 1 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family YjhX_toxin PF09857.9 CTQ26594.1 - 1.1e-41 140.7 0.2 1.2e-41 140.6 0.2 1.0 1 0 0 1 1 1 1 Putative toxin of bacterial toxin-antitoxin pair Methyltransf_31 PF13847.6 CTQ26595.1 - 3.3e-08 33.5 0.0 4.4e-08 33.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ26595.1 - 9e-08 32.7 0.1 1.4e-07 32.1 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ26595.1 - 1.8e-05 25.3 0.0 3e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 CTQ26595.1 - 0.00016 21.1 0.0 0.00021 20.7 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PCMT PF01135.19 CTQ26595.1 - 0.00057 19.7 0.0 0.0012 18.6 0.0 1.4 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.12 CTQ26595.1 - 0.0058 16.3 0.0 0.0087 15.7 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_23 PF13489.6 CTQ26595.1 - 0.012 15.5 0.0 0.024 14.5 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ26595.1 - 0.016 15.9 0.0 0.028 15.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_24 PF13578.6 CTQ26595.1 - 0.024 15.6 0.0 0.049 14.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.6 CTQ26595.1 - 0.045 13.7 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain GCD14 PF08704.10 CTQ26595.1 - 0.054 13.2 0.0 0.075 12.7 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DOT1 PF08123.13 CTQ26595.1 - 0.07 12.6 0.0 0.16 11.5 0.0 1.5 2 0 0 2 2 2 0 Histone methylation protein DOT1 Methyltransf_15 PF09445.10 CTQ26595.1 - 0.12 11.9 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase GST_C PF00043.25 CTQ26596.1 - 9.1e-12 45.0 0.0 1.4e-11 44.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 CTQ26596.1 - 1.2e-10 41.5 0.0 2.3e-10 40.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 CTQ26596.1 - 3.4e-10 39.8 0.8 8.9e-10 38.5 0.8 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 CTQ26596.1 - 1.6e-09 38.1 0.0 3.1e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ26596.1 - 1.6e-08 34.7 0.0 2.7e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 CTQ26596.1 - 7e-08 32.6 0.0 1.1e-07 32.0 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain EIIC-GAT PF03611.14 CTQ26597.1 - 2.2e-65 221.3 34.2 2.7e-65 221.0 34.2 1.1 1 0 0 1 1 1 1 PTS system sugar-specific permease component CbtB PF09489.10 CTQ26597.1 - 0.35 11.0 1.2 2.8 8.1 1.2 2.6 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtB) 2-Hacid_dh_C PF02826.19 CTQ26598.1 - 6e-58 195.1 0.0 8.4e-58 194.7 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 CTQ26598.1 - 5e-18 65.0 0.0 1.5e-17 63.5 0.0 1.8 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 CTQ26598.1 - 0.0015 18.7 0.4 0.39 10.9 0.1 2.3 2 0 0 2 2 2 2 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 CTQ26598.1 - 0.0083 16.2 0.0 0.02 15.0 0.0 1.6 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NTP_transf_8 PF12281.8 CTQ26598.1 - 0.094 12.7 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Nucleotidyltransferase adh_short_C2 PF13561.6 CTQ26599.1 - 2.6e-54 184.3 0.4 3e-54 184.1 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ26599.1 - 9.5e-51 172.0 0.7 1.1e-50 171.8 0.7 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ26599.1 - 2.4e-14 53.7 0.6 3.4e-14 53.2 0.6 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 CTQ26599.1 - 1e-05 25.0 0.0 1.4e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) Epimerase PF01370.21 CTQ26599.1 - 0.061 12.8 0.1 0.13 11.7 0.0 1.5 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family FGGY_N PF00370.21 CTQ26600.1 - 3.3e-64 216.8 0.0 1.3e-63 214.8 0.0 1.9 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 CTQ26600.1 - 1.6e-29 103.0 0.0 2.4e-29 102.5 0.0 1.3 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 CTQ26600.1 - 7.2e-09 35.5 0.2 1.1e-08 34.9 0.2 1.3 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Hydant_A_N PF05378.13 CTQ26600.1 - 0.081 12.6 0.3 0.13 11.9 0.3 1.3 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase N-terminal region G3P_antiterm PF04309.12 CTQ26601.1 - 1.7e-48 164.3 0.0 1.9e-48 164.2 0.0 1.0 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator DeoC PF01791.9 CTQ26602.1 - 8.1e-20 71.4 0.0 1e-19 71.1 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase Zn_ribbon_2 PF12674.7 CTQ26604.1 - 1.1e-09 38.8 0.3 1.5e-09 38.3 0.3 1.2 1 0 0 1 1 1 1 Putative zinc ribbon domain PknG_rubred PF16919.5 CTQ26604.1 - 0.0069 16.6 0.6 0.011 16.0 0.6 1.3 1 0 0 1 1 1 1 Protein kinase G rubredoxin domain DZR PF12773.7 CTQ26604.1 - 0.0074 16.3 3.7 0.012 15.6 3.7 1.4 1 1 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 CTQ26604.1 - 0.013 15.2 2.0 1.3 8.9 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain TENA_THI-4 PF03070.16 CTQ26604.1 - 0.056 13.2 0.1 0.057 13.2 0.1 1.1 1 0 0 1 1 1 0 TENA/THI-4/PQQC family zinc-ribbons_6 PF07191.12 CTQ26604.1 - 0.058 13.4 0.6 0.074 13.0 0.6 1.2 1 0 0 1 1 1 0 zinc-ribbons Nudix_N_2 PF14803.6 CTQ26604.1 - 0.13 12.2 3.4 0.16 11.9 0.1 2.1 2 0 0 2 2 2 0 Nudix N-terminal Pyr_redox_2 PF07992.14 CTQ26605.1 - 4e-71 239.7 1.2 5.2e-71 239.3 1.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 CTQ26605.1 - 3.1e-32 111.1 0.1 6.7e-32 110.0 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 CTQ26605.1 - 1.2e-22 80.2 3.3 6.7e-20 71.4 0.1 3.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ26605.1 - 7.5e-18 64.8 0.0 1.9e-17 63.5 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 CTQ26605.1 - 3.7e-09 36.2 13.4 2.9e-06 26.6 0.8 4.7 4 1 1 5 5 5 2 FAD binding domain FAD_oxidored PF12831.7 CTQ26605.1 - 9.7e-09 35.1 2.7 9.7e-09 35.1 2.7 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 CTQ26605.1 - 1.7e-07 30.7 5.4 1e-05 24.8 3.2 2.8 2 1 0 2 2 2 1 Glucose inhibited division protein A DAO PF01266.24 CTQ26605.1 - 2e-07 31.0 12.8 0.014 15.0 0.0 3.9 4 0 0 4 4 4 3 FAD dependent oxidoreductase HI0933_like PF03486.14 CTQ26605.1 - 2.2e-07 30.0 6.0 0.00033 19.5 0.4 3.7 3 1 1 4 4 4 2 HI0933-like protein NAD_binding_8 PF13450.6 CTQ26605.1 - 9.1e-07 29.0 7.4 0.0019 18.4 1.0 3.5 3 1 0 3 3 3 2 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 CTQ26605.1 - 1.8e-05 24.2 6.4 0.00071 18.9 0.5 3.2 2 1 1 3 3 3 1 FAD binding domain K_oxygenase PF13434.6 CTQ26605.1 - 2e-05 23.9 0.1 0.00078 18.7 0.0 2.4 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) 3HCDH_N PF02737.18 CTQ26605.1 - 0.0011 18.8 0.0 0.0037 17.2 0.0 1.9 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 CTQ26605.1 - 0.0094 15.3 1.0 0.023 14.0 0.0 2.1 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 CTQ26605.1 - 0.013 14.6 1.4 0.31 10.0 0.1 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein Hydantoinase_A PF01968.18 CTQ26605.1 - 0.044 13.0 0.3 4.7 6.4 0.0 2.3 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase XdhC_C PF13478.6 CTQ26605.1 - 0.052 14.0 0.2 0.7 10.4 0.0 2.5 2 0 0 2 2 2 0 XdhC Rossmann domain Thi4 PF01946.17 CTQ26605.1 - 0.11 11.7 0.3 0.27 10.5 0.1 1.7 2 0 0 2 2 2 0 Thi4 family ANAPC4_WD40 PF12894.7 CTQ26605.1 - 0.11 12.8 0.0 0.29 11.5 0.0 1.6 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain NAD_binding_7 PF13241.6 CTQ26605.1 - 0.12 12.8 1.2 2.3 8.7 0.0 2.6 2 1 0 2 2 2 0 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 CTQ26605.1 - 0.14 11.4 5.3 5.9 6.1 0.0 2.9 2 1 1 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_9 PF13454.6 CTQ26605.1 - 0.46 10.5 9.3 6.1 6.8 0.1 3.3 3 0 0 3 3 3 0 FAD-NAD(P)-binding Trp_halogenase PF04820.14 CTQ26605.1 - 0.51 9.1 5.5 0.13 11.1 0.4 2.4 3 1 0 3 3 3 0 Tryptophan halogenase 2-oxoacid_dh PF00198.23 CTQ26606.1 - 6.4e-84 281.0 0.0 8.4e-84 280.6 0.0 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3_binding PF02817.17 CTQ26606.1 - 1.7e-17 63.5 1.5 1.1e-08 35.2 0.1 2.8 2 0 0 2 2 2 2 e3 binding domain Biotin_lipoyl PF00364.22 CTQ26606.1 - 2e-17 62.8 0.0 1.2e-16 60.3 0.0 2.1 2 0 0 2 2 2 1 Biotin-requiring enzyme QRPTase_N PF02749.16 CTQ26606.1 - 0.026 14.6 0.1 8.4 6.5 0.0 3.1 3 1 1 4 4 4 0 Quinolinate phosphoribosyl transferase, N-terminal domain Biotin_lipoyl_2 PF13533.6 CTQ26606.1 - 0.036 13.9 0.0 5 7.0 0.0 3.3 2 1 1 3 3 3 0 Biotin-lipoyl like SLD3 PF08639.10 CTQ26606.1 - 0.044 12.6 1.3 0.093 11.5 0.1 1.8 1 1 1 2 2 2 0 DNA replication regulator SLD3 Transket_pyr PF02779.24 CTQ26607.1 - 2.7e-58 196.6 0.0 4.4e-58 195.9 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 CTQ26607.1 - 1.2e-39 135.0 0.3 2.2e-39 134.2 0.1 1.6 2 0 0 2 2 2 1 Transketolase, C-terminal domain PFOR_II PF17147.4 CTQ26607.1 - 6.8e-05 23.1 0.1 0.00015 22.0 0.1 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II E1_dh PF00676.20 CTQ26608.1 - 6.3e-83 278.2 0.0 7.2e-83 278.0 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 CTQ26608.1 - 2.8e-07 30.5 2.7 1.2e-06 28.4 2.7 1.9 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 CTQ26608.1 - 0.025 13.8 0.1 0.044 13.0 0.1 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Transketolase_N PF00456.21 CTQ26608.1 - 0.04 12.9 0.0 0.057 12.4 0.0 1.3 1 0 0 1 1 1 0 Transketolase, thiamine diphosphate binding domain GerE PF00196.19 CTQ26609.1 - 1.4e-21 75.8 1.6 3.5e-21 74.5 1.6 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family TPR_MalT PF17874.1 CTQ26609.1 - 4.2e-20 72.4 12.8 8.6e-20 71.4 9.5 2.2 2 0 0 2 2 2 1 MalT-like TPR region AAA_16 PF13191.6 CTQ26609.1 - 1.8e-06 28.4 0.1 1.8e-06 28.4 0.1 2.8 4 0 0 4 4 4 1 AAA ATPase domain Sigma70_r4 PF04545.16 CTQ26609.1 - 5.6e-05 22.6 0.2 0.0002 20.8 0.1 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 AAA_22 PF13401.6 CTQ26609.1 - 0.00014 22.2 0.0 0.0017 18.6 0.0 2.7 3 0 0 3 3 3 1 AAA domain Sigma70_r4_2 PF08281.12 CTQ26609.1 - 0.0012 18.5 0.1 0.0035 17.0 0.1 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 AAA_14 PF13173.6 CTQ26609.1 - 0.004 17.2 0.0 0.032 14.3 0.0 2.3 1 1 0 1 1 1 1 AAA domain HTH_24 PF13412.6 CTQ26609.1 - 0.0051 16.3 0.2 0.014 14.9 0.2 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 CTQ26609.1 - 0.0083 15.9 0.1 0.0083 15.9 0.1 2.1 2 0 0 2 2 2 1 Homeodomain-like domain AAA_30 PF13604.6 CTQ26609.1 - 0.067 12.9 0.1 0.49 10.1 0.0 2.4 3 0 0 3 3 3 0 AAA domain HTH_38 PF13936.6 CTQ26609.1 - 0.14 12.0 0.2 0.42 10.4 0.2 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain AAA_19 PF13245.6 CTQ26609.1 - 0.14 12.4 0.0 0.52 10.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain TPR_4 PF07721.14 CTQ26609.1 - 1.4 9.7 15.0 2.8 8.8 0.2 6.5 7 0 0 7 7 6 0 Tetratricopeptide repeat HNH PF01844.23 CTQ26610.1 - 4.7e-15 55.5 2.5 4.7e-15 55.5 1.3 1.7 2 0 0 2 2 2 1 HNH endonuclease HNH_5 PF14279.6 CTQ26610.1 - 1e-05 25.3 1.5 2.9e-05 23.8 0.1 2.2 2 0 0 2 2 2 1 HNH endonuclease HNH_2 PF13391.6 CTQ26610.1 - 0.0017 18.5 0.6 0.018 15.2 0.6 2.2 1 1 0 1 1 1 1 HNH endonuclease HNH_4 PF13395.6 CTQ26610.1 - 0.0091 15.9 0.0 0.021 14.7 0.0 1.6 1 0 0 1 1 1 1 HNH endonuclease Pox_D5 PF03288.16 CTQ26612.1 - 7.4e-13 48.8 0.0 7.8e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Poxvirus D5 protein-like DUF5375 PF17345.2 CTQ26612.1 - 0.00018 21.3 0.1 0.00034 20.4 0.1 1.5 1 1 0 1 1 1 1 Family of unknown function (DUF5375) RVT_1 PF00078.27 CTQ26613.1 - 4.6e-22 78.6 0.4 2.2e-21 76.4 0.1 1.9 1 1 1 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) Mic1 PF07035.12 CTQ26613.1 - 0.062 13.0 0.1 0.13 12.0 0.1 1.5 1 0 0 1 1 1 0 Colon cancer-associated protein Mic1-like HTH_45 PF14947.6 CTQ26614.1 - 0.032 14.2 0.0 0.058 13.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DUF2922 PF11148.8 CTQ26615.1 - 0.047 13.4 0.5 3 7.6 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2922) VIT_2 PF13757.6 CTQ26615.1 - 0.076 12.9 0.0 5.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Vault protein inter-alpha-trypsin domain DUF1043 PF06295.12 CTQ26615.1 - 0.098 12.7 2.1 0.088 12.8 0.6 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) FliG_N PF14842.6 CTQ26615.1 - 0.17 12.4 0.9 3 8.5 0.3 2.4 2 1 0 2 2 2 0 FliG N-terminal domain Phage_integrase PF00589.22 CTQ26616.1 - 4e-22 78.8 0.0 8.2e-22 77.8 0.0 1.5 2 0 0 2 2 2 1 Phage integrase family Arm-DNA-bind_3 PF13356.6 CTQ26617.1 - 1.6e-08 34.8 0.1 2.6e-08 34.1 0.1 1.4 1 0 0 1 1 1 1 Arm DNA-binding domain Arm-DNA-bind_3 PF13356.6 CTQ26618.1 - 0.0082 16.5 0.0 0.0082 16.5 0.0 1.0 1 0 0 1 1 1 1 Arm DNA-binding domain Aldedh PF00171.22 CTQ26619.1 - 3.3e-21 75.3 2.2 1.7e-16 59.8 0.4 2.2 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF1487 PF07368.11 CTQ26619.1 - 0.094 12.1 0.0 0.18 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) HTH_6 PF01418.17 CTQ26619.1 - 0.13 12.2 0.0 0.32 11.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family MoCF_biosynth PF00994.24 CTQ26619.1 - 0.28 10.8 1.8 44 3.7 0.0 3.8 4 1 1 5 5 5 0 Probable molybdopterin binding domain FlgT_N PF16548.5 CTQ26619.1 - 0.31 11.6 3.1 1.8 9.2 0.1 3.0 3 0 0 3 3 3 0 Flagellar assembly protein T, N-terminal domain AA_kinase PF00696.28 CTQ26620.1 - 7.2e-44 150.2 1.7 9.3e-44 149.8 1.7 1.1 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 CTQ26620.1 - 1.9e-20 72.6 0.0 5.3e-20 71.1 0.0 1.8 1 0 0 1 1 1 1 PUA domain Porin_1 PF00267.21 CTQ26621.1 - 4.1e-143 476.9 23.4 4.6e-143 476.7 23.4 1.0 1 0 0 1 1 1 1 Gram-negative porin Porin_4 PF13609.6 CTQ26621.1 - 2.5e-18 66.9 31.6 2.6e-18 66.8 30.8 1.4 1 1 0 1 1 1 1 Gram-negative porin BBP2_2 PF10082.9 CTQ26621.1 - 0.00031 19.7 0.4 0.0019 17.1 0.0 2.1 2 0 0 2 2 2 1 Putative beta-barrel porin 2 Barstar PF01337.18 CTQ26621.1 - 0.19 11.8 0.9 16 5.6 0.1 2.5 2 0 0 2 2 2 0 Barstar (barnase inhibitor) NLPC_P60 PF00877.19 CTQ26622.1 - 1.8e-23 82.6 0.0 2.2e-23 82.3 0.0 1.1 1 0 0 1 1 1 1 NlpC/P60 family Peptidase_C92 PF05708.12 CTQ26622.1 - 0.011 15.9 0.0 2.4 8.2 0.0 2.4 2 1 1 3 3 3 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family EamA PF00892.20 CTQ26623.1 - 5.7e-23 81.6 37.4 4.6e-12 46.3 18.9 2.3 2 0 0 2 2 2 2 EamA-like transporter family HAD PF12710.7 CTQ26624.1 - 2.5e-34 119.4 0.0 2.8e-34 119.2 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ26624.1 - 6.4e-06 26.6 0.1 9.6e-05 22.8 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF2608 PF11019.8 CTQ26624.1 - 0.083 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2608) BPD_transp_1 PF00528.22 CTQ26627.1 - 3.4e-07 30.2 10.1 3.4e-07 30.2 10.1 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ26628.1 - 3.6e-13 49.7 10.9 3.6e-13 49.7 10.9 1.7 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Herpes_US9 PF06072.11 CTQ26628.1 - 0.49 10.3 2.5 0.65 9.9 0.0 2.4 3 0 0 3 3 3 0 Alphaherpesvirus tegument protein US9 Phosphonate-bd PF12974.7 CTQ26629.1 - 3.9e-49 167.5 0.0 4.5e-49 167.2 0.0 1.0 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.11 CTQ26629.1 - 0.0029 17.6 0.3 0.0086 16.0 0.0 1.9 2 0 0 2 2 2 1 NMT1/THI5 like SBP_bac_3 PF00497.20 CTQ26629.1 - 0.0064 15.9 0.0 0.017 14.5 0.0 1.8 2 1 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 Peptidase_M99_C PF17129.4 CTQ26629.1 - 0.038 14.2 0.0 0.079 13.2 0.0 1.5 1 0 0 1 1 1 0 C-terminal domain of metallo-carboxypeptidase ABC_tran PF00005.27 CTQ26630.1 - 9.8e-31 107.1 0.0 1.6e-30 106.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26630.1 - 2.6e-07 30.8 0.0 0.00076 19.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ26630.1 - 4e-05 23.6 0.4 0.00023 21.1 0.1 2.0 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 CTQ26630.1 - 0.00013 21.5 0.1 0.0075 15.7 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ26630.1 - 0.003 17.3 0.2 0.0065 16.2 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain KdpD PF02702.17 CTQ26630.1 - 0.0044 16.5 0.0 0.0063 16.0 0.0 1.2 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain MMR_HSR1 PF01926.23 CTQ26630.1 - 0.011 15.9 0.1 0.023 14.8 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.6 CTQ26630.1 - 0.011 15.4 0.0 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CTQ26630.1 - 0.036 14.4 0.1 0.13 12.6 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain Cellulase PF00150.18 CTQ26630.1 - 0.036 13.5 0.0 0.047 13.1 0.0 1.1 1 0 0 1 1 1 0 Cellulase (glycosyl hydrolase family 5) AAA_15 PF13175.6 CTQ26630.1 - 0.051 13.3 0.1 5.1 6.7 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain SbcCD_C PF13558.6 CTQ26630.1 - 0.1 12.8 0.4 1 9.6 0.0 2.5 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 CTQ26630.1 - 0.16 12.1 0.0 0.28 11.4 0.0 1.7 1 1 0 1 1 1 0 AAA domain GerE PF00196.19 CTQ26631.1 - 9.6e-12 44.3 0.2 2e-11 43.2 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 CTQ26631.1 - 5.2e-05 22.8 0.1 9.1e-05 22.1 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 CTQ26631.1 - 0.00015 21.4 0.1 0.00029 20.6 0.1 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_7 PF02796.15 CTQ26631.1 - 0.00021 21.3 0.1 0.00041 20.4 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_29 PF13551.6 CTQ26631.1 - 0.011 15.7 0.1 0.019 15.0 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn helix HTH_28 PF13518.6 CTQ26631.1 - 0.014 15.5 0.0 0.023 14.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain MatB PF16449.5 CTQ26632.1 - 1.8e-87 291.4 15.1 2.2e-87 291.1 15.1 1.0 1 0 0 1 1 1 1 Fimbrillin MatB DEAD PF00270.29 CTQ26632.1 - 0.078 12.7 0.5 0.14 11.9 0.3 1.4 1 1 0 1 1 1 0 DEAD/DEAH box helicase EcpB_C PF18649.1 CTQ26633.1 - 2.1e-32 110.9 0.1 5.7e-32 109.5 0.0 1.7 2 0 0 2 2 2 1 EcpB C-terminal domain PapD_N PF00345.20 CTQ26633.1 - 0.0029 17.5 0.0 0.0042 17.0 0.0 1.3 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain CooC_C PF15976.5 CTQ26634.1 - 1.4e-29 102.0 0.0 3.7e-29 100.6 0.0 1.8 1 0 0 1 1 1 1 CS1-pili formation C-terminal TcfC PF16967.5 CTQ26634.1 - 4.1e-27 93.5 0.3 2.5e-26 90.9 0.1 2.4 2 0 0 2 2 2 1 E-set like domain CarbopepD_reg_2 PF13715.6 CTQ26634.1 - 0.0011 19.0 0.0 0.0026 17.7 0.0 1.7 1 0 0 1 1 1 1 CarboxypepD_reg-like domain CarboxypepD_reg PF13620.6 CTQ26634.1 - 0.0037 17.5 2.7 0.0072 16.6 0.0 3.0 4 0 0 4 4 4 1 Carboxypeptidase regulatory-like domain MetallophosN PF16371.5 CTQ26634.1 - 0.068 13.4 0.0 0.21 11.9 0.0 1.8 1 0 0 1 1 1 0 N terminal of Calcineurin-like phosphoesterase DUF4982 PF16355.5 CTQ26634.1 - 0.091 12.7 0.0 28 4.8 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4982) PapD_N PF00345.20 CTQ26636.1 - 1.1e-05 25.3 0.0 1.7e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain BPD_transp_1 PF00528.22 CTQ26637.1 - 4.9e-16 59.0 13.2 4.9e-16 59.0 13.2 1.4 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ26638.1 - 1.3e-10 41.4 7.1 1.3e-10 41.4 7.1 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 CTQ26639.1 - 7.2e-38 130.2 0.1 9.9e-38 129.8 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26639.1 - 5.2e-12 46.2 1.8 1e-06 28.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26639.1 - 1e-07 31.6 0.7 2.2e-06 27.3 0.7 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_13 PF13166.6 CTQ26639.1 - 6.3e-06 25.2 0.0 0.0037 16.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 CTQ26639.1 - 1.1e-05 25.9 2.0 2.8e-05 24.6 1.8 1.8 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ26639.1 - 0.00023 21.1 0.0 0.00045 20.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 CTQ26639.1 - 0.00023 20.8 0.0 0.00046 19.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 CTQ26639.1 - 0.00056 20.1 1.2 0.012 15.8 0.1 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 CTQ26639.1 - 0.0011 19.3 0.4 0.013 15.7 0.4 2.3 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CTQ26639.1 - 0.0011 18.7 0.7 0.0047 16.7 0.7 2.0 1 1 0 1 1 1 1 AAA domain Adeno_IVa2 PF02456.15 CTQ26639.1 - 0.0025 16.7 0.1 0.023 13.5 0.0 2.0 2 0 0 2 2 2 1 Adenovirus IVa2 protein AAA_18 PF13238.6 CTQ26639.1 - 0.0028 18.2 0.0 0.0065 17.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 CTQ26639.1 - 0.0038 17.8 0.0 0.0058 17.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CTQ26639.1 - 0.0088 16.2 0.1 0.018 15.2 0.1 1.7 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 CTQ26639.1 - 0.011 15.7 0.0 0.021 14.7 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DUF87 PF01935.17 CTQ26639.1 - 0.016 15.3 0.1 0.039 14.0 0.1 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA PF00004.29 CTQ26639.1 - 0.018 15.5 0.1 0.26 11.7 0.1 2.5 1 1 1 2 2 2 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 CTQ26639.1 - 0.02 14.1 0.0 0.06 12.5 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain NACHT PF05729.12 CTQ26639.1 - 0.023 14.6 0.1 0.22 11.4 0.0 2.2 2 1 0 2 2 2 0 NACHT domain ABC_ATPase PF09818.9 CTQ26639.1 - 0.023 13.5 0.4 1.8 7.2 0.1 2.6 2 1 0 2 2 2 0 Predicted ATPase of the ABC class NTPase_1 PF03266.15 CTQ26639.1 - 0.031 14.2 0.0 0.63 9.9 0.0 2.2 2 0 0 2 2 2 0 NTPase Rad17 PF03215.15 CTQ26639.1 - 0.05 13.5 0.0 0.087 12.7 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain Cytidylate_kin PF02224.18 CTQ26639.1 - 0.064 13.0 0.1 0.16 11.7 0.1 1.7 1 0 0 1 1 1 0 Cytidylate kinase MMR_HSR1 PF01926.23 CTQ26639.1 - 0.087 12.9 0.2 0.24 11.5 0.1 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_5 PF07728.14 CTQ26639.1 - 0.097 12.7 0.1 1.4 8.9 0.1 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 CTQ26639.1 - 0.099 12.9 1.2 0.46 10.7 0.1 2.4 3 0 0 3 3 3 0 AAA domain AAA_10 PF12846.7 CTQ26639.1 - 0.11 11.4 0.0 0.18 10.7 0.0 1.4 1 0 0 1 1 1 0 AAA-like domain ATP_bind_1 PF03029.17 CTQ26639.1 - 0.13 12.0 0.0 0.45 10.2 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein KAP_NTPase PF07693.14 CTQ26639.1 - 0.15 11.3 0.2 1.9 7.6 0.0 2.0 1 1 0 2 2 2 0 KAP family P-loop domain AAA_15 PF13175.6 CTQ26639.1 - 0.19 11.4 0.1 3.8 7.1 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_24 PF13479.6 CTQ26639.1 - 0.29 10.8 0.4 0.5 10.1 0.0 1.5 2 0 0 2 2 1 0 AAA domain SBP_bac_3 PF00497.20 CTQ26640.1 - 1.8e-62 210.7 0.1 2.1e-62 210.5 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ26640.1 - 9.7e-11 41.9 0.0 5.8e-09 36.2 0.0 2.2 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site ABC_tran PF00005.27 CTQ26643.1 - 9.8e-25 87.7 0.0 1.7e-24 86.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26643.1 - 5.4e-10 39.6 2.3 5.7e-05 23.1 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26643.1 - 0.00076 19.0 0.4 0.052 13.0 0.4 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 CTQ26643.1 - 0.0028 17.4 0.1 0.0055 16.5 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_19 PF13245.6 CTQ26643.1 - 0.0092 16.3 0.2 0.022 15.1 0.1 1.9 1 1 1 2 2 2 1 AAA domain AAA_23 PF13476.6 CTQ26643.1 - 0.015 15.8 0.0 0.021 15.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 CTQ26643.1 - 0.016 15.0 0.1 0.033 13.9 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 CTQ26643.1 - 0.025 14.3 0.1 0.067 12.9 0.0 1.7 2 1 0 2 2 2 0 AAA domain MukB PF04310.12 CTQ26643.1 - 0.027 14.3 0.0 0.046 13.5 0.0 1.4 1 0 0 1 1 1 0 MukB N-terminal SbcCD_C PF13558.6 CTQ26643.1 - 0.047 13.9 0.1 0.25 11.6 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Zeta_toxin PF06414.12 CTQ26643.1 - 0.094 12.0 0.1 0.22 10.8 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin SRP54 PF00448.22 CTQ26643.1 - 0.11 12.2 0.0 0.23 11.1 0.0 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 CTQ26643.1 - 0.11 12.8 0.0 0.23 11.8 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain TrwB_AAD_bind PF10412.9 CTQ26643.1 - 0.14 11.0 0.0 0.27 10.1 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Oxidored_FMN PF00724.20 CTQ26643.1 - 0.2 10.9 0.1 8.8 5.5 0.0 2.1 2 0 0 2 2 2 0 NADH:flavin oxidoreductase / NADH oxidase family ABC_tran PF00005.27 CTQ26644.1 - 4.4e-34 117.9 0.0 5.6e-34 117.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26644.1 - 5.8e-08 32.9 3.0 0.005 16.7 1.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 CTQ26644.1 - 2.6e-05 24.8 0.3 4.3e-05 24.1 0.3 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CTQ26644.1 - 0.0014 18.3 0.2 0.052 13.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CTQ26644.1 - 0.0017 18.1 0.0 0.0037 17.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 CTQ26644.1 - 0.0033 16.9 0.2 0.92 8.9 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain BCA_ABC_TP_C PF12399.8 CTQ26644.1 - 0.0057 16.6 0.0 0.0097 15.8 0.0 1.4 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_22 PF13401.6 CTQ26644.1 - 0.0078 16.5 0.5 0.19 12.0 0.5 2.2 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ26644.1 - 0.0087 16.0 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase Zeta_toxin PF06414.12 CTQ26644.1 - 0.013 14.8 0.0 0.023 13.9 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin IstB_IS21 PF01695.17 CTQ26644.1 - 0.035 13.8 0.1 3.3 7.4 0.0 2.9 2 1 1 3 3 3 0 IstB-like ATP binding protein AAA PF00004.29 CTQ26644.1 - 0.054 13.9 0.2 0.29 11.5 0.1 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 CTQ26644.1 - 0.061 13.4 0.4 0.13 12.4 0.4 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 CTQ26644.1 - 0.069 12.9 0.2 0.26 11.0 0.1 1.8 2 0 0 2 2 2 0 AAA ATPase domain NB-ARC PF00931.22 CTQ26644.1 - 0.085 12.0 0.0 0.38 9.9 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain GPW_gp25 PF04965.14 CTQ26644.1 - 0.1 12.4 0.0 0.24 11.2 0.0 1.6 2 0 0 2 2 2 0 Gene 25-like lysozyme AAA_13 PF13166.6 CTQ26644.1 - 0.11 11.1 0.1 0.15 10.7 0.1 1.1 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 CTQ26644.1 - 0.13 11.7 0.0 0.35 10.3 0.0 1.7 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit cobW PF02492.19 CTQ26644.1 - 0.26 10.9 0.6 0.46 10.1 0.1 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain BPD_transp_2 PF02653.16 CTQ26645.1 - 1.1e-36 126.4 28.1 1.1e-36 126.4 28.1 1.6 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 CTQ26646.1 - 4.9e-47 160.3 42.9 5.7e-47 160.1 42.9 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peripla_BP_6 PF13458.6 CTQ26647.1 - 7.8e-50 170.5 5.8 9.2e-50 170.2 5.8 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 CTQ26647.1 - 5.6e-19 68.5 0.6 5.6e-19 68.5 0.6 1.6 2 1 0 2 2 2 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 CTQ26647.1 - 4.5e-10 39.0 2.0 5.8e-09 35.4 2.0 2.0 1 1 0 1 1 1 1 Periplasmic binding protein domain LppC PF04348.13 CTQ26647.1 - 1.6e-06 27.3 2.6 4.2e-06 25.9 2.6 1.8 1 1 0 1 1 1 1 LppC putative lipoprotein Ribosomal_L18p PF00861.22 CTQ26647.1 - 0.068 13.5 0.3 0.2 12.0 0.3 1.8 1 1 0 1 1 1 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EutC PF05985.11 CTQ26648.1 - 1.3e-88 296.2 0.0 1.5e-88 296.0 0.0 1.0 1 0 0 1 1 1 1 Ethanolamine ammonia-lyase light chain (EutC) EutB PF06751.11 CTQ26649.1 - 7.2e-221 733.6 0.0 8.4e-221 733.4 0.0 1.0 1 0 0 1 1 1 1 Ethanolamine ammonia lyase large subunit (EutB) AA_permease_2 PF13520.6 CTQ26650.1 - 2.3e-41 142.1 49.3 2.8e-41 141.7 49.3 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 CTQ26650.1 - 5e-30 104.5 42.5 6.7e-30 104.1 42.5 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 CTQ26651.1 - 1.3e-114 383.5 40.9 1.5e-114 383.3 40.9 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ26651.1 - 6.5e-45 153.7 47.2 7.5e-45 153.5 47.2 1.0 1 0 0 1 1 1 1 Amino acid permease DUF4131 PF13567.6 CTQ26651.1 - 0.004 16.8 0.9 0.004 16.8 0.9 4.5 4 1 2 6 6 6 1 Domain of unknown function (DUF4131) Trp_oprn_chp PF09534.10 CTQ26651.1 - 0.01 15.6 4.9 0.01 15.6 4.9 2.5 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) S-methyl_trans PF02574.16 CTQ26652.1 - 2.5e-81 273.4 0.0 3.1e-81 273.1 0.0 1.0 1 0 0 1 1 1 1 Homocysteine S-methyltransferase OpuAC PF04069.12 CTQ26653.1 - 9.5e-25 87.6 1.5 1.4e-24 87.0 1.5 1.3 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system NMT1_2 PF13379.6 CTQ26653.1 - 7.4e-21 75.0 2.7 1.6e-20 73.9 2.8 1.5 1 1 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 CTQ26653.1 - 5.7e-19 68.9 0.0 8.1e-19 68.4 0.0 1.3 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 CTQ26653.1 - 2.5e-08 33.8 0.2 3.6e-08 33.3 0.2 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 CTQ26653.1 - 1.5e-05 24.6 0.1 0.023 14.1 0.0 3.0 1 1 2 3 3 3 2 Bacterial extracellular solute-binding proteins, family 3 ABC_tran PF00005.27 CTQ26654.1 - 6.3e-33 114.2 0.0 8.5e-33 113.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26654.1 - 1.9e-06 27.9 0.0 0.039 13.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ26654.1 - 2.6e-05 24.7 0.3 4.6e-05 23.9 0.3 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 CTQ26654.1 - 2.9e-05 24.4 0.0 0.0075 16.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 CTQ26654.1 - 0.00022 21.2 0.0 0.00042 20.2 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 CTQ26654.1 - 0.00023 21.5 0.3 0.0011 19.3 0.3 1.9 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ26654.1 - 0.00075 19.0 0.1 0.095 12.1 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 CTQ26654.1 - 0.0013 18.4 0.4 0.015 15.0 0.4 2.1 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 CTQ26654.1 - 0.0014 18.6 0.0 0.014 15.3 0.0 2.4 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea AAA PF00004.29 CTQ26654.1 - 0.0024 18.3 0.0 0.015 15.7 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 CTQ26654.1 - 0.0041 17.1 0.0 0.0079 16.1 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain T2SSE PF00437.20 CTQ26654.1 - 0.009 15.1 0.0 0.013 14.5 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_23 PF13476.6 CTQ26654.1 - 0.01 16.4 0.0 0.018 15.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ26654.1 - 0.012 15.5 0.6 0.054 13.4 0.1 2.0 2 0 0 2 2 2 0 NACHT domain SbcCD_C PF13558.6 CTQ26654.1 - 0.013 15.7 0.4 0.087 13.1 0.4 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 CTQ26654.1 - 0.066 13.4 0.2 0.26 11.4 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ26654.1 - 0.078 12.5 0.4 0.2 11.2 0.0 1.8 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.6 CTQ26654.1 - 0.083 12.6 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 CTQ26654.1 - 0.099 12.7 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 CTQ26654.1 - 0.12 11.1 0.1 2.4 6.8 0.0 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class Mg_chelatase PF01078.21 CTQ26654.1 - 0.14 11.5 0.0 0.27 10.6 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 CTQ26654.1 - 0.15 12.1 0.2 0.35 10.9 0.1 1.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 CTQ26654.1 - 0.25 11.7 0.0 0.43 11.0 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_24 PF13479.6 CTQ26654.1 - 0.35 10.5 0.5 1 9.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 CTQ26655.1 - 1.5e-23 83.5 15.7 1.5e-23 83.5 15.7 2.0 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component HEAT_PBS PF03130.16 CTQ26655.1 - 6 7.9 7.0 9.4 7.2 0.5 3.8 3 1 0 3 3 3 0 PBS lyase HEAT-like repeat TauD PF02668.16 CTQ26656.1 - 2.3e-67 227.6 4.4 2.6e-67 227.5 4.4 1.0 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family ArsA_ATPase PF02374.15 CTQ26656.1 - 0.084 12.0 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Anion-transporting ATPase Acetyltransf_5 PF13444.6 CTQ26657.1 - 2e-23 83.0 0.0 5e-23 81.7 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acyltransferase PF01553.21 CTQ26657.1 - 1e-11 44.6 0.0 1.7e-11 43.9 0.0 1.4 1 0 0 1 1 1 1 Acyltransferase Y1_Tnp PF01797.16 CTQ26658.1 - 8.1e-05 22.7 0.2 0.00011 22.2 0.2 1.2 1 0 0 1 1 1 1 Transposase IS200 like ALAD PF00490.21 CTQ26659.1 - 4.3e-134 446.7 0.2 4.8e-134 446.5 0.2 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase ComA PF02679.15 CTQ26659.1 - 0.073 12.5 0.0 0.24 10.9 0.0 1.7 2 1 0 2 2 2 0 (2R)-phospho-3-sulfolactate synthase (ComA) Beta-lactamase PF00144.24 CTQ26660.1 - 1.7e-60 205.0 1.5 2.3e-60 204.6 1.5 1.0 1 0 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 CTQ26660.1 - 0.0085 15.6 0.0 0.026 14.0 0.0 1.7 2 0 0 2 2 2 1 D-alanyl-D-alanine carboxypeptidase Isochorismatase PF00857.20 CTQ26661.1 - 1.4e-26 93.8 0.7 1.7e-26 93.5 0.7 1.1 1 0 0 1 1 1 1 Isochorismatase family SbmA_BacA PF05992.12 CTQ26662.1 - 4e-164 545.6 10.2 4e-164 545.6 10.2 1.5 2 0 0 2 2 2 1 SbmA/BacA-like family ABC_membrane_2 PF06472.15 CTQ26662.1 - 9.4e-15 54.7 2.0 9.4e-15 54.7 2.0 2.3 2 1 0 2 2 2 1 ABC transporter transmembrane region 2 DUF1615 PF07759.12 CTQ26663.1 - 3e-147 490.0 0.0 3.5e-147 489.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1615) DUF2755 PF10954.8 CTQ26664.1 - 1.8e-52 175.4 0.6 2e-52 175.3 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2755) DUF2062 PF09835.9 CTQ26664.1 - 0.013 15.4 0.6 0.013 15.4 0.6 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2062) Promethin PF16015.5 CTQ26664.1 - 7 6.6 8.2 7.9 6.5 1.0 2.1 1 1 1 2 2 2 0 Promethin DUF2754 PF10953.8 CTQ26665.1 - 7.9e-45 151.0 3.3 8.4e-45 150.9 3.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2754) DUF2818 PF10993.8 CTQ26665.1 - 0.004 17.7 3.3 1.7 9.3 0.0 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF2818) DUF1761 PF08570.10 CTQ26665.1 - 0.02 15.2 1.5 0.021 15.1 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1761) DUF2207 PF09972.9 CTQ26665.1 - 0.16 10.7 0.1 0.18 10.5 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2627 PF11118.8 CTQ26665.1 - 6.3 7.5 7.4 1.2e+02 3.4 0.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2627) Dala_Dala_lig_C PF07478.13 CTQ26666.1 - 4.8e-83 277.7 0.0 6.8e-83 277.2 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 CTQ26666.1 - 3.8e-29 101.2 0.0 6.9e-29 100.3 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase N-terminus ATP-grasp PF02222.22 CTQ26666.1 - 9e-15 54.7 0.1 1.7e-14 53.8 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 CTQ26666.1 - 4.5e-07 29.6 0.3 7.3e-07 28.9 0.3 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 CTQ26666.1 - 4e-06 27.0 0.0 7.3e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.6 CTQ26666.1 - 4.4e-06 26.4 0.5 5.4e-05 22.9 0.5 2.3 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 CTQ26666.1 - 7.8e-05 22.1 0.0 0.034 13.4 0.0 2.1 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp RimK PF08443.11 CTQ26666.1 - 0.0048 16.5 0.1 0.026 14.1 0.1 2.1 1 1 0 1 1 1 1 RimK-like ATP-grasp domain GARS_A PF01071.19 CTQ26666.1 - 0.0086 15.9 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Extensin-like_C PF06904.12 CTQ26667.1 - 9.5e-54 182.1 0.1 1.1e-53 181.9 0.1 1.0 1 0 0 1 1 1 1 Extensin-like protein C-terminus MFS_1 PF07690.16 CTQ26668.1 - 2.9e-48 164.6 54.3 1.1e-28 100.2 26.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ26668.1 - 1.9e-16 60.0 34.8 2.1e-11 43.4 13.2 3.1 1 1 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 CTQ26668.1 - 4.3e-12 45.6 22.7 5.8e-10 38.6 22.7 2.9 1 1 0 1 1 1 1 MFS_1 like family MFS_3 PF05977.13 CTQ26668.1 - 1.6e-06 26.8 25.5 7.2e-06 24.7 16.8 2.1 1 1 0 2 2 2 2 Transmembrane secretion effector MFS_4 PF06779.14 CTQ26668.1 - 0.0036 16.7 30.8 0.032 13.5 9.1 2.3 2 0 0 2 2 2 2 Uncharacterised MFS-type transporter YbfB PGG PF13962.6 CTQ26668.1 - 7.5 6.4 12.4 1.3 8.9 1.1 3.6 3 0 0 3 3 3 0 Domain of unknown function Anti-adapt_IraP PF10796.9 CTQ26669.1 - 5.1e-32 110.3 3.7 5.6e-32 110.2 3.7 1.0 1 0 0 1 1 1 1 Sigma-S stabilisation anti-adaptor protein HsbA PF12296.8 CTQ26669.1 - 9.8e-05 22.8 0.4 0.0068 16.8 0.0 2.0 1 1 1 2 2 2 2 Hydrophobic surface binding protein A kleA_kleC PF17383.2 CTQ26669.1 - 0.025 14.9 2.0 0.035 14.4 2.0 1.3 1 0 0 1 1 1 0 Uncharacterized KorC regulated protein A DUF2594 PF10769.9 CTQ26669.1 - 0.047 13.7 1.8 0.05 13.6 1.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2594) Alk_phosphatase PF00245.20 CTQ26670.1 - 3.1e-140 467.8 4.7 4.2e-131 437.7 1.8 2.1 1 1 1 2 2 2 2 Alkaline phosphatase Metalloenzyme PF01676.18 CTQ26670.1 - 5.3e-08 32.5 0.1 2.6e-07 30.3 0.1 2.0 1 1 0 1 1 1 1 Metalloenzyme superfamily Sulfatase PF00884.23 CTQ26670.1 - 0.0033 16.9 1.0 0.23 10.8 0.0 3.2 2 2 1 3 3 3 1 Sulfatase Phosphodiest PF01663.22 CTQ26670.1 - 0.058 13.0 0.1 0.076 12.6 0.1 1.5 1 1 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase PT-VENN PF04829.13 CTQ26670.1 - 1.2 9.3 5.1 0.23 11.5 0.8 2.1 2 0 0 2 2 2 0 Pre-toxin domain with VENN motif PsiF_repeat PF07769.14 CTQ26671.1 - 4.8e-35 119.1 18.6 1e-17 63.7 6.5 2.2 2 0 0 2 2 2 2 psiF repeat GPR15L PF15854.5 CTQ26671.1 - 0.021 15.1 0.3 0.049 13.9 0.0 1.6 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 P5CR_dimer PF14748.6 CTQ26672.1 - 2.2e-38 130.7 0.9 4.4e-38 129.7 0.9 1.5 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 CTQ26672.1 - 8.8e-25 87.1 0.4 2e-24 86.0 0.4 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 CTQ26672.1 - 1.1e-08 35.4 0.1 2.7e-08 34.2 0.1 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Sacchrp_dh_NADP PF03435.18 CTQ26672.1 - 0.00036 20.8 0.0 0.00069 19.9 0.0 1.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 CTQ26672.1 - 0.00094 19.3 0.0 0.011 15.9 0.0 2.3 1 1 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GFO_IDH_MocA PF01408.22 CTQ26672.1 - 0.0044 17.8 0.0 0.01 16.7 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold OCD_Mu_crystall PF02423.15 CTQ26672.1 - 0.014 14.4 0.0 0.027 13.4 0.0 1.5 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family ApbA PF02558.16 CTQ26672.1 - 0.023 14.3 2.1 0.21 11.2 2.1 2.1 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 CTQ26672.1 - 0.041 13.2 0.1 0.1 11.9 0.0 1.6 1 1 1 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 CTQ26672.1 - 0.042 13.8 2.4 1.3 9.0 2.4 2.4 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DUF3489 PF11994.8 CTQ26672.1 - 0.17 11.9 0.0 13 5.9 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3489) 3HCDH_N PF02737.18 CTQ26672.1 - 0.55 10.1 4.5 2 8.3 0.0 2.7 2 1 1 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF188 PF02639.14 CTQ26673.1 - 7.9e-50 167.9 0.0 9.1e-50 167.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized BCR, YaiI/YqxD family COG1671 DUF2076 PF09849.9 CTQ26674.1 - 3.2e-70 237.1 14.4 3.8e-70 236.9 14.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) TauE PF01925.19 CTQ26674.1 - 0.002 17.8 0.4 0.26 10.9 0.1 2.1 2 0 0 2 2 2 2 Sulfite exporter TauE/SafE NPV_P10 PF05531.12 CTQ26674.1 - 0.0055 17.1 0.5 0.011 16.2 0.5 1.5 1 0 0 1 1 1 1 Nucleopolyhedrovirus P10 protein DivIC PF04977.15 CTQ26674.1 - 0.064 13.0 0.3 0.12 12.2 0.3 1.3 1 0 0 1 1 1 0 Septum formation initiator RTBV_P12 PF06361.11 CTQ26674.1 - 0.11 12.9 0.2 0.23 11.9 0.2 1.7 1 1 0 1 1 1 0 Rice tungro bacilliform virus P12 protein Adaptin_binding PF10199.9 CTQ26674.1 - 0.16 12.6 2.3 0.68 10.5 0.2 2.4 2 1 0 2 2 2 0 Alpha and gamma adaptin binding protein p34 SKI PF01202.22 CTQ26676.1 - 1.8e-43 148.4 0.0 2e-43 148.2 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase AAA_18 PF13238.6 CTQ26676.1 - 1.3e-07 32.2 0.0 2.9e-07 31.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ26676.1 - 0.00024 21.5 0.2 0.00068 20.1 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 CTQ26676.1 - 0.00036 20.7 0.1 0.0011 19.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 CTQ26676.1 - 0.00054 20.4 0.0 0.0014 19.1 0.0 1.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 CTQ26676.1 - 0.0018 18.0 0.0 0.0031 17.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 CTQ26676.1 - 0.004 17.2 0.0 0.0078 16.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ26676.1 - 0.0052 17.1 0.1 0.011 16.0 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 CTQ26676.1 - 0.0052 17.0 0.1 0.015 15.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 CTQ26676.1 - 0.01 15.8 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Cytidylate_kin PF02224.18 CTQ26676.1 - 0.018 14.8 0.0 0.089 12.5 0.0 2.0 1 1 1 2 2 2 0 Cytidylate kinase RNA_helicase PF00910.22 CTQ26676.1 - 0.024 15.0 0.0 0.095 13.1 0.0 1.8 2 0 0 2 2 2 0 RNA helicase Sigma54_activ_2 PF14532.6 CTQ26676.1 - 0.026 14.6 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain PduV-EutP PF10662.9 CTQ26676.1 - 0.038 13.7 0.0 0.085 12.6 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Rad17 PF03215.15 CTQ26676.1 - 0.076 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain ABC_tran PF00005.27 CTQ26676.1 - 0.081 13.4 0.0 0.14 12.7 0.0 1.6 1 1 0 1 1 1 0 ABC transporter Cytidylate_kin2 PF13189.6 CTQ26676.1 - 0.1 12.7 0.1 0.23 11.6 0.1 1.9 1 1 0 1 1 1 0 Cytidylate kinase-like family ATPase_2 PF01637.18 CTQ26676.1 - 0.16 11.9 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea dNK PF01712.19 CTQ26676.1 - 0.2 11.5 0.0 5.6 6.8 0.0 2.2 2 0 0 2 2 2 0 Deoxynucleoside kinase YaiA PF16362.5 CTQ26677.1 - 4.8e-38 129.0 2.5 5.3e-38 128.9 2.5 1.0 1 0 0 1 1 1 1 YaiA protein AroM PF07302.11 CTQ26678.1 - 8.5e-70 234.5 0.6 9.6e-70 234.4 0.6 1.0 1 0 0 1 1 1 1 AroM protein Ppnp PF06865.11 CTQ26679.1 - 5.6e-37 126.0 0.1 6.2e-37 125.9 0.1 1.0 1 0 0 1 1 1 1 Pyrimidine/purine nucleoside phosphorylase EutQ PF06249.12 CTQ26679.1 - 0.017 14.9 0.0 0.019 14.7 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ RdgC PF04381.12 CTQ26680.1 - 9.6e-127 422.3 2.7 1.1e-126 422.1 2.7 1.0 1 0 0 1 1 1 1 Putative exonuclease, RdgC M PF02370.16 CTQ26680.1 - 6.9 7.6 11.0 0.59 10.9 2.1 3.4 3 0 0 3 3 3 0 M protein repeat ROK PF00480.20 CTQ26681.1 - 1.9e-95 319.8 0.1 2.1e-95 319.6 0.1 1.0 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 CTQ26681.1 - 2.2e-10 40.0 0.3 7.6e-10 38.3 0.3 1.9 1 1 1 2 2 2 1 Glucokinase BcrAD_BadFG PF01869.20 CTQ26681.1 - 3.4e-06 26.8 0.2 0.014 14.9 0.1 2.2 2 1 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family Hydant_A_N PF05378.13 CTQ26681.1 - 0.00033 20.4 1.1 0.00036 20.3 0.1 1.5 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase N-terminal region DEDD_Tnp_IS110 PF01548.17 CTQ26681.1 - 0.0029 17.5 0.0 0.0056 16.6 0.0 1.5 2 0 0 2 2 2 1 Transposase Acetate_kinase PF00871.17 CTQ26681.1 - 0.0069 15.1 0.0 0.0095 14.7 0.0 1.1 1 0 0 1 1 1 1 Acetokinase family baeRF_family2 PF18844.1 CTQ26681.1 - 0.14 12.3 0.5 0.55 10.3 0.0 2.0 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 2 SbcCD_C PF13558.6 CTQ26682.1 - 9.5e-16 57.8 0.6 5.1e-15 55.5 0.6 2.4 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 CTQ26682.1 - 2.6e-13 51.0 90.1 0.067 13.7 90.2 6.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ26682.1 - 3.1e-11 43.2 0.0 6.8e-05 22.4 0.0 3.3 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ26682.1 - 1.3e-07 31.2 0.0 3.5e-07 29.8 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ26682.1 - 0.0037 17.0 0.3 0.03 14.0 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain ABC_tran PF00005.27 CTQ26682.1 - 0.0062 17.1 0.0 0.0062 17.1 0.0 6.2 3 2 0 3 3 1 1 ABC transporter AAA_21 PF13304.6 CTQ26682.1 - 0.01 15.7 0.0 0.024 14.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system cobW PF02492.19 CTQ26682.1 - 0.051 13.2 0.7 0.16 11.5 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 CTQ26682.1 - 0.071 13.0 0.1 1.1 9.2 0.0 3.0 2 0 0 2 2 2 0 RsgA GTPase MMR_HSR1 PF01926.23 CTQ26682.1 - 0.078 13.1 0.1 0.77 9.9 0.0 2.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 CTQ26682.1 - 0.098 12.6 0.2 0.53 10.2 0.0 2.3 2 0 0 2 2 2 0 NTPase AAA_18 PF13238.6 CTQ26682.1 - 0.24 12.0 1.8 5.5 7.6 0.0 3.6 3 0 0 3 3 3 0 AAA domain AAA_22 PF13401.6 CTQ26682.1 - 0.33 11.2 0.0 0.33 11.2 0.0 5.7 4 2 1 5 5 4 0 AAA domain AAA_28 PF13521.6 CTQ26682.1 - 0.43 10.8 0.0 0.43 10.8 0.0 5.7 5 3 1 6 6 3 0 AAA domain AAA_25 PF13481.6 CTQ26682.1 - 0.49 10.0 0.0 0.49 10.0 0.0 3.9 4 2 2 6 6 6 0 AAA domain AAA PF00004.29 CTQ26682.1 - 0.57 10.6 2.8 24 5.3 0.0 3.5 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) SbcD_C PF12320.8 CTQ26683.1 - 4.2e-24 84.6 4.1 8.1e-24 83.8 4.1 1.5 1 0 0 1 1 1 1 Type 5 capsule protein repressor C-terminal domain Metallophos PF00149.28 CTQ26683.1 - 1.5e-15 58.2 0.0 2.7e-15 57.4 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 CTQ26683.1 - 1.3e-09 38.4 0.7 2.2e-08 34.5 0.2 2.6 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase superfamily domain Response_reg PF00072.24 CTQ26684.1 - 7.2e-29 100.2 0.0 1.2e-28 99.6 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ26684.1 - 1.6e-28 98.6 0.0 2.8e-28 97.8 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal PhoR PF11808.8 CTQ26685.1 - 1.1e-27 96.2 9.9 2.1e-27 95.3 9.9 1.5 1 0 0 1 1 1 1 Phosphate regulon sensor protein PhoR HATPase_c PF02518.26 CTQ26685.1 - 1.3e-25 90.1 0.0 2.2e-25 89.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ26685.1 - 1.3e-18 66.7 2.7 2.3e-18 66.0 0.8 2.4 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 CTQ26685.1 - 4.9e-09 36.2 0.0 1.2e-08 34.9 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 CTQ26685.1 - 6.4e-08 32.6 0.0 1e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 CTQ26685.1 - 0.00013 21.8 0.0 0.00022 21.1 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 CTQ26685.1 - 0.016 15.2 0.0 0.039 14.0 0.0 1.7 1 0 0 1 1 1 0 PAS domain HATPase_c_5 PF14501.6 CTQ26685.1 - 0.069 13.1 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 GHKL domain Branch_AA_trans PF05525.13 CTQ26686.1 - 4.5e-159 529.9 33.2 5.2e-159 529.7 33.2 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein AnkUBD PF18418.1 CTQ26686.1 - 0.21 11.7 0.0 0.47 10.6 0.0 1.5 1 0 0 1 1 1 0 Ankyrin ubiquitin-binding domain AA_permease PF00324.21 CTQ26687.1 - 6.2e-106 354.8 48.4 7.3e-106 354.6 48.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ26687.1 - 5.4e-46 157.3 55.1 6.1e-46 157.1 55.1 1.0 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 CTQ26687.1 - 7e-06 25.1 24.7 7e-06 25.1 24.7 3.5 1 1 2 3 3 3 2 Spore germination protein Alpha-amylase PF00128.24 CTQ26688.1 - 3.4e-86 289.9 0.0 5.1e-86 289.3 0.0 1.2 1 0 0 1 1 1 1 Alpha amylase, catalytic domain Alpha-amylase_N PF02903.14 CTQ26688.1 - 1.1e-05 25.5 0.0 2.8e-05 24.3 0.0 1.7 1 0 0 1 1 1 1 Alpha amylase, N-terminal ig-like domain Malt_amylase_C PF16657.5 CTQ26688.1 - 0.00033 20.7 0.0 0.00074 19.6 0.0 1.6 1 0 0 1 1 1 1 Maltogenic Amylase, C-terminal domain DUF3459 PF11941.8 CTQ26688.1 - 0.0048 17.2 0.2 0.039 14.3 0.0 2.6 2 0 0 2 2 2 1 Domain of unknown function (DUF3459) LysR_substrate PF03466.20 CTQ26689.1 - 2.5e-24 85.8 0.4 3.4e-24 85.4 0.4 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26689.1 - 2e-14 53.3 0.0 3.8e-14 52.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Isochorismatase PF00857.20 CTQ26690.1 - 1.8e-24 86.9 0.2 5.4e-24 85.3 0.2 1.7 1 1 0 1 1 1 1 Isochorismatase family ABM PF03992.16 CTQ26691.1 - 1e-07 32.0 0.0 1.5e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF1330 PF07045.11 CTQ26691.1 - 0.01 16.2 0.0 0.019 15.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1330) Amidohydro_3 PF07969.11 CTQ26692.1 - 2.4e-123 413.1 0.6 2.9e-123 412.8 0.6 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 CTQ26692.1 - 2.1e-07 30.6 0.0 1.3e-05 24.7 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family F_bP_aldolase PF01116.20 CTQ26693.1 - 3.3e-93 312.2 0.4 3.7e-93 312.1 0.4 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II ThiG PF05690.14 CTQ26693.1 - 0.0023 17.3 0.6 0.013 14.8 0.1 2.1 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 CTQ26693.1 - 0.072 12.5 0.1 0.22 11.0 0.1 1.7 1 1 0 1 1 1 0 Histidine biosynthesis protein PfkB PF00294.24 CTQ26694.1 - 8.2e-35 120.6 0.0 1.7e-34 119.5 0.0 1.5 1 1 0 1 1 1 1 pfkB family carbohydrate kinase EIIC-GAT PF03611.14 CTQ26695.1 - 2.1e-125 418.9 31.8 2.1e-125 418.9 31.8 1.4 2 0 0 2 2 2 1 PTS system sugar-specific permease component PTS_IIB PF02302.17 CTQ26696.1 - 6.4e-14 52.4 1.0 7.5e-14 52.2 1.0 1.2 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit HyaE PF07449.11 CTQ26696.1 - 0.053 13.5 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE PTS_EIIA_2 PF00359.22 CTQ26697.1 - 3e-24 85.5 0.2 3.6e-24 85.3 0.2 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AhpC-TSA PF00578.21 CTQ26698.1 - 4.4e-35 120.3 0.0 6.7e-35 119.7 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 CTQ26698.1 - 7.5e-19 67.9 0.0 9.5e-19 67.6 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 CTQ26698.1 - 1.1e-12 47.5 0.1 2.4e-12 46.5 0.1 1.6 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Thioredoxin_8 PF13905.6 CTQ26698.1 - 0.017 15.4 0.0 0.033 14.5 0.0 1.5 1 1 0 1 1 1 0 Thioredoxin-like ACP_PD PF04336.12 CTQ26699.1 - 2.1e-31 108.4 3.2 3.2e-31 107.9 3.2 1.3 1 0 0 1 1 1 1 Acyl carrier protein phosphodiesterase Zn_peptidase_2 PF04298.12 CTQ26700.1 - 0.13 11.6 0.1 0.17 11.3 0.1 1.2 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase Queuosine_synth PF02547.15 CTQ26701.1 - 4.8e-132 440.0 0.0 5.4e-132 439.8 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein TGT PF01702.18 CTQ26702.1 - 4.2e-153 509.6 0.0 5.1e-153 509.3 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase YajC PF02699.15 CTQ26703.1 - 1.9e-26 91.8 0.6 2.2e-26 91.5 0.6 1.1 1 0 0 1 1 1 1 Preprotein translocase subunit Orf78 PF06024.12 CTQ26703.1 - 0.0027 18.0 0.1 0.0046 17.2 0.1 1.3 1 0 0 1 1 1 1 Orf78 (ac78) TetR_C_32 PF09209.11 CTQ26703.1 - 0.016 15.2 0.0 0.021 14.8 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain MreC PF04085.14 CTQ26703.1 - 0.017 15.0 0.1 0.022 14.7 0.1 1.2 1 0 0 1 1 1 0 rod shape-determining protein MreC PIRT PF15099.6 CTQ26703.1 - 0.043 13.4 0.0 0.059 13.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family DUF5385 PF17359.2 CTQ26703.1 - 0.15 11.6 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) SecD-TM1 PF13721.6 CTQ26704.1 - 4.2e-32 110.7 3.5 2.5e-29 101.8 0.7 3.3 4 0 0 4 4 4 2 SecD export protein N-terminal TM region SecD_SecF PF02355.16 CTQ26704.1 - 2.7e-15 56.2 11.1 4.9e-15 55.4 11.1 1.3 1 0 0 1 1 1 1 Protein export membrane protein MMPL PF03176.15 CTQ26704.1 - 4.4e-08 32.4 12.4 4.4e-08 32.4 12.4 1.7 2 0 0 2 2 2 1 MMPL family Sec_GG PF07549.14 CTQ26704.1 - 2.4e-06 26.9 0.0 5.4e-06 25.7 0.0 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif Patched PF02460.18 CTQ26704.1 - 2.2 6.3 8.1 3.1 5.8 8.1 1.1 1 0 0 1 1 1 0 Patched family Sterol-sensing PF12349.8 CTQ26704.1 - 3.2 7.6 7.0 6.4 6.6 7.0 1.5 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation SecD_SecF PF02355.16 CTQ26705.1 - 6.7e-69 231.1 12.2 9.7e-69 230.5 12.2 1.2 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 CTQ26705.1 - 7.6e-12 44.3 0.2 1.8e-11 43.1 0.2 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif ACR_tran PF00873.19 CTQ26705.1 - 0.0017 16.1 9.3 0.0021 15.8 9.3 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family PIG-F PF06699.11 CTQ26705.1 - 0.034 14.3 2.5 0.053 13.7 2.5 1.3 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F Peptidase_M19 PF01244.21 CTQ26705.1 - 0.13 11.4 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 Membrane dipeptidase (Peptidase family M19) PRA1 PF03208.19 CTQ26705.1 - 1.3 8.6 8.2 0.2 11.3 1.2 2.3 1 1 1 2 2 2 0 PRA1 family protein Glyoxalase PF00903.25 CTQ26706.1 - 1.4e-07 31.7 0.0 3.6e-07 30.4 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 CTQ26706.1 - 0.00054 20.7 0.0 0.00071 20.3 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain WYL PF13280.6 CTQ26707.1 - 3.1e-19 69.7 0.6 4.8e-19 69.1 0.6 1.3 1 0 0 1 1 1 1 WYL domain HTH_11 PF08279.12 CTQ26707.1 - 4.4e-17 61.8 0.8 7.7e-17 61.0 0.2 1.7 2 0 0 2 2 2 1 HTH domain HTH_DeoR PF08220.12 CTQ26707.1 - 3.2e-05 23.6 0.1 7.1e-05 22.5 0.1 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_22 PF13309.6 CTQ26707.1 - 0.0018 18.3 0.0 0.0039 17.2 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_18 PF12833.7 CTQ26707.1 - 0.014 15.7 0.4 5.7 7.3 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 CTQ26707.1 - 0.014 15.1 0.7 0.071 12.9 0.0 2.5 3 0 0 3 3 3 0 Homeodomain-like domain TetR_N PF00440.23 CTQ26707.1 - 0.015 15.1 0.0 0.036 13.9 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_28 PF13518.6 CTQ26707.1 - 0.017 15.2 0.1 0.042 14.0 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.7 CTQ26707.1 - 0.018 15.1 0.0 0.047 13.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 CTQ26707.1 - 0.035 13.9 2.0 1.1 9.1 0.0 3.1 3 0 0 3 3 3 0 HTH DNA binding domain HTH_29 PF13551.6 CTQ26707.1 - 0.035 14.1 0.1 0.12 12.5 0.1 1.9 2 0 0 2 2 2 0 Winged helix-turn helix HTH_24 PF13412.6 CTQ26707.1 - 0.043 13.4 0.2 0.07 12.7 0.2 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_32 PF13565.6 CTQ26707.1 - 0.05 14.2 5.4 0.45 11.2 0.1 3.0 3 1 0 3 3 3 0 Homeodomain-like domain HTH_36 PF13730.6 CTQ26707.1 - 0.072 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Channel_Tsx PF03502.13 CTQ26708.1 - 2.3e-81 273.2 19.9 2.6e-81 273.0 19.9 1.0 1 0 0 1 1 1 1 Nucleoside-specific channel-forming protein, Tsx LPAM_1 PF08139.12 CTQ26708.1 - 0.012 16.0 1.4 0.012 16.0 1.4 1.7 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site DUF3251 PF11622.8 CTQ26710.1 - 1.1e-78 262.6 3.2 1.2e-78 262.4 3.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3251) LURAP PF14854.6 CTQ26710.1 - 0.044 13.7 0.1 0.072 13.1 0.1 1.3 1 0 0 1 1 1 0 Leucine rich adaptor protein IMPa_helical PF18642.1 CTQ26710.1 - 0.1 13.1 0.1 0.14 12.6 0.1 1.2 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain ATP-cone PF03477.16 CTQ26711.1 - 8.9e-15 55.0 0.1 1.2e-14 54.6 0.1 1.2 1 0 0 1 1 1 1 ATP cone domain Nre_C PF04895.12 CTQ26711.1 - 0.11 12.5 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Archaeal Nre, C-terminal RibD_C PF01872.17 CTQ26712.1 - 3.6e-60 203.2 0.0 4.7e-60 202.8 0.0 1.1 1 0 0 1 1 1 1 RibD C-terminal domain dCMP_cyt_deam_1 PF00383.23 CTQ26712.1 - 9.6e-22 76.8 0.2 1.5e-21 76.2 0.2 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 CTQ26712.1 - 4.1e-12 46.0 0.0 6.6e-12 45.3 0.0 1.4 1 0 0 1 1 1 1 MafB19-like deaminase Inv-AAD PF18785.1 CTQ26712.1 - 0.0032 17.3 0.0 0.011 15.6 0.0 1.8 1 1 0 1 1 1 1 Invertebrate-AID/APOBEC-deaminase Acyltransferase PF01553.21 CTQ26712.1 - 0.023 14.3 0.0 0.043 13.4 0.0 1.4 1 0 0 1 1 1 0 Acyltransferase APOBEC_N PF08210.11 CTQ26712.1 - 0.056 13.3 0.0 0.18 11.7 0.0 1.8 1 1 0 1 1 1 0 APOBEC-like N-terminal domain DMRL_synthase PF00885.19 CTQ26713.1 - 1.5e-55 186.9 0.8 1.6e-55 186.8 0.8 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase NusB PF01029.18 CTQ26714.1 - 9.7e-36 123.0 0.1 1.1e-35 122.8 0.1 1.0 1 0 0 1 1 1 1 NusB family AIRS PF00586.24 CTQ26715.1 - 1.1e-20 74.0 0.0 2.2e-20 73.1 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 CTQ26715.1 - 5.7e-10 39.5 0.0 8e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain PgpA PF04608.13 CTQ26716.1 - 7e-53 178.5 8.9 8e-53 178.3 8.9 1.0 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A TfoX_N PF04993.13 CTQ26716.1 - 0.068 13.4 0.2 0.12 12.6 0.2 1.3 1 0 0 1 1 1 0 TfoX N-terminal domain DUF4281 PF14108.6 CTQ26716.1 - 0.35 11.2 7.8 0.33 11.3 2.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4281) Aldo_ket_red PF00248.21 CTQ26717.1 - 6.7e-76 255.3 0.0 8.2e-76 255.0 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DXP_synthase_N PF13292.6 CTQ26718.1 - 1.5e-115 385.2 0.0 4.5e-115 383.6 0.0 1.7 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.24 CTQ26718.1 - 3.2e-40 137.7 0.0 5.4e-40 137.0 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 CTQ26718.1 - 7e-27 93.8 0.4 1.6e-26 92.6 0.0 1.8 2 0 0 2 2 2 1 Transketolase, C-terminal domain TPP_enzyme_C PF02775.21 CTQ26718.1 - 9.9e-06 25.4 0.0 3.5e-05 23.6 0.1 1.9 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 CTQ26718.1 - 3.2e-05 23.0 0.2 5.4e-05 22.3 0.2 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component Transketolase_N PF00456.21 CTQ26718.1 - 0.0035 16.4 0.0 0.012 14.5 0.1 1.8 3 0 0 3 3 3 1 Transketolase, thiamine diphosphate binding domain polyprenyl_synt PF00348.17 CTQ26719.1 - 6.1e-58 195.9 0.1 7.5e-58 195.6 0.1 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase UbiA PF01040.18 CTQ26719.1 - 0.032 13.5 0.1 0.14 11.4 0.0 1.8 2 0 0 2 2 2 0 UbiA prenyltransferase family Exonuc_VII_S PF02609.16 CTQ26720.1 - 2.2e-21 75.7 1.5 2.6e-21 75.4 1.5 1.1 1 0 0 1 1 1 1 Exonuclease VII small subunit KxDL PF10241.9 CTQ26720.1 - 0.057 13.7 0.1 0.094 13.0 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein ThiI PF02568.14 CTQ26721.1 - 2.8e-80 268.6 0.0 4.3e-80 268.0 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 CTQ26721.1 - 4.4e-26 91.7 2.0 7.8e-26 90.9 0.3 2.1 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 CTQ26721.1 - 0.0011 18.5 0.1 0.27 10.7 0.0 3.1 2 1 1 3 3 3 2 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 CTQ26721.1 - 0.0017 17.9 0.1 0.016 14.7 0.0 2.4 1 1 1 2 2 2 1 Diphthamide synthase tRNA_Me_trans PF03054.16 CTQ26721.1 - 0.042 12.6 0.1 0.12 11.2 0.0 1.8 2 0 0 2 2 2 0 tRNA methyl transferase AHSA1 PF08327.11 CTQ26722.1 - 2.3e-29 102.2 0.1 2.8e-29 101.9 0.1 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein DJ-1_PfpI PF01965.24 CTQ26723.1 - 5.6e-45 153.1 0.0 6.5e-45 152.9 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family ApbA_C PF08546.11 CTQ26724.1 - 2.7e-36 124.5 0.3 3.8e-36 124.0 0.3 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.16 CTQ26724.1 - 1.6e-22 79.8 0.1 3.3e-22 78.8 0.1 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 CTQ26724.1 - 0.0038 17.2 0.2 0.018 15.0 0.1 2.3 2 2 1 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 CTQ26724.1 - 0.029 14.3 0.2 1.3 8.8 0.0 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF520 PF04461.13 CTQ26725.1 - 5.6e-65 218.4 2.6 6.2e-65 218.2 2.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF520) MFS_1 PF07690.16 CTQ26726.1 - 2.2e-46 158.4 65.2 3.5e-41 141.3 43.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ26726.1 - 3.5e-09 36.1 13.5 3.5e-09 36.1 13.5 2.9 2 1 0 2 2 2 1 Sugar (and other) transporter MFS_1_like PF12832.7 CTQ26726.1 - 0.02 13.8 27.9 0.93 8.3 7.4 2.3 1 1 1 2 2 2 0 MFS_1 like family PUCC PF03209.15 CTQ26726.1 - 0.16 10.9 33.8 1.8 7.5 4.0 3.6 1 1 1 2 2 2 0 PUCC protein DUF5391 PF17369.2 CTQ26726.1 - 0.44 10.6 14.9 0.47 10.5 3.1 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5391) GFO_IDH_MocA PF01408.22 CTQ26727.1 - 9.8e-28 97.4 0.0 1.6e-27 96.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 CTQ26727.1 - 7.8e-10 38.8 0.0 2.6e-09 37.1 0.0 1.9 2 0 0 2 2 2 1 Oxidoreductase family, C-terminal alpha/beta domain Mycoplasma_p37 PF06646.11 CTQ26727.1 - 0.022 14.0 0.0 0.034 13.4 0.0 1.2 1 0 0 1 1 1 0 High affinity transport system protein p37 MFS_1 PF07690.16 CTQ26728.1 - 1.9e-55 188.2 86.3 1.1e-39 136.3 45.3 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ26728.1 - 9.5e-25 87.4 37.4 4.5e-23 81.8 15.3 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_4 PF06779.14 CTQ26728.1 - 1.3e-07 31.2 8.9 1.3e-07 31.2 8.9 2.1 2 0 0 2 2 2 1 Uncharacterised MFS-type transporter YbfB PUCC PF03209.15 CTQ26728.1 - 0.0048 16.0 24.9 0.0037 16.3 19.9 2.8 1 1 1 2 2 2 1 PUCC protein AP_endonuc_2 PF01261.24 CTQ26729.1 - 5.5e-16 58.6 0.0 7.4e-16 58.2 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF218 PF02698.17 CTQ26729.1 - 0.052 13.6 0.1 0.11 12.5 0.1 1.6 1 1 0 1 1 1 0 DUF218 domain FAD_binding_2 PF00890.24 CTQ26730.1 - 7.9e-104 348.0 6.2 8.9e-104 347.9 6.2 1.0 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 CTQ26730.1 - 8.8e-16 58.4 2.7 2.7e-15 56.8 2.7 1.8 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_oxidored PF12831.7 CTQ26730.1 - 6.8e-10 38.9 1.0 3e-09 36.7 0.7 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 CTQ26730.1 - 1.6e-08 34.1 0.0 6.8e-05 22.2 0.1 3.0 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ26730.1 - 8.5e-07 28.0 1.1 5.4e-05 22.1 2.9 2.1 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 CTQ26730.1 - 1.5e-05 25.1 2.5 1.5e-05 25.1 2.5 2.7 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 CTQ26730.1 - 0.0001 21.7 2.0 0.0012 18.2 2.4 2.2 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 CTQ26730.1 - 0.00011 21.6 3.1 0.00023 20.5 3.1 1.4 1 0 0 1 1 1 1 Thi4 family Amino_oxidase PF01593.24 CTQ26730.1 - 0.0014 18.0 2.4 0.3 10.3 0.0 3.2 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase Pyr_redox_3 PF13738.6 CTQ26730.1 - 0.025 13.8 0.3 0.05 12.8 0.3 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ26730.1 - 0.026 13.6 4.2 0.072 12.2 4.6 1.5 2 0 0 2 2 2 0 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 CTQ26730.1 - 0.03 13.6 4.0 0.046 13.0 4.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 CTQ26730.1 - 0.093 13.3 0.4 2.5 8.7 1.6 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 CTQ26730.1 - 0.24 10.4 2.4 1.6 7.7 2.2 2.0 2 0 0 2 2 2 0 Lycopene cyclase protein NIPSNAP PF07978.13 CTQ26731.1 - 1.6e-32 111.7 0.2 1.8e-32 111.6 0.2 1.0 1 0 0 1 1 1 1 NIPSNAP DUF2914 PF11141.8 CTQ26731.1 - 0.089 12.5 0.2 0.17 11.6 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2914) FAD_binding_2 PF00890.24 CTQ26732.1 - 7.8e-91 305.2 6.8 8.8e-91 305.0 6.8 1.0 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 CTQ26732.1 - 1.1e-12 48.2 2.4 1.1e-12 48.2 2.4 2.5 2 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_oxidored PF12831.7 CTQ26732.1 - 5.8e-09 35.8 2.6 5.8e-09 35.8 2.6 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 CTQ26732.1 - 1.9e-06 26.9 4.8 6.8e-06 25.0 3.3 2.1 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 CTQ26732.1 - 0.00011 21.6 0.5 0.001 18.4 0.3 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ26732.1 - 0.00064 18.9 4.2 0.015 14.4 4.8 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 CTQ26732.1 - 0.0012 19.1 3.1 0.0012 19.1 3.1 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 CTQ26732.1 - 0.0015 17.8 2.3 0.0059 15.9 2.3 1.9 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 CTQ26732.1 - 0.021 14.1 0.4 0.052 12.8 0.2 1.7 2 0 0 2 2 2 0 FAD binding domain Pyr_redox_3 PF13738.6 CTQ26732.1 - 0.029 13.6 1.1 0.084 12.1 1.1 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HDPD PF02924.14 CTQ26732.1 - 0.076 13.1 1.0 0.3 11.2 1.0 2.1 1 1 0 1 1 1 0 Bacteriophage lambda head decoration protein D MarR_2 PF12802.7 CTQ26732.1 - 0.12 12.3 0.6 0.53 10.2 0.1 2.5 2 0 0 2 2 2 0 MarR family Lycopene_cycl PF05834.12 CTQ26732.1 - 0.49 9.4 2.8 0.22 10.5 0.4 1.6 2 0 0 2 2 2 0 Lycopene cyclase protein Shikimate_dh_N PF08501.11 CTQ26733.1 - 7.3e-20 71.0 0.0 1.5e-19 70.0 0.0 1.5 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain ThiF PF00899.21 CTQ26733.1 - 7.5e-05 22.2 0.1 0.00018 21.0 0.1 1.5 1 0 0 1 1 1 1 ThiF family Shikimate_DH PF01488.20 CTQ26733.1 - 0.043 13.9 0.0 0.12 12.4 0.0 1.7 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase IclR PF01614.18 CTQ26734.1 - 3.1e-24 85.3 0.1 6.2e-24 84.3 0.1 1.4 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 CTQ26734.1 - 4.9e-10 39.1 1.0 2.4e-09 36.8 0.5 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain Tape_meas_lam_C PF09718.10 CTQ26735.1 - 3.1 8.0 9.8 13 6.0 5.3 3.0 1 1 1 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) UbiA PF01040.18 CTQ26736.1 - 7e-62 209.0 21.0 8.4e-62 208.7 21.0 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF3040 PF11239.8 CTQ26736.1 - 0.0076 16.5 0.2 0.0076 16.5 0.2 3.5 4 0 0 4 4 4 1 Protein of unknown function (DUF3040) Gly-zipper_OmpA PF13436.6 CTQ26736.1 - 0.031 14.0 0.1 0.071 12.9 0.1 1.5 1 0 0 1 1 1 0 Glycine-zipper domain COX14 PF14880.6 CTQ26736.1 - 0.53 10.2 7.0 4.1 7.3 0.0 4.1 3 1 0 3 3 3 0 Cytochrome oxidase c assembly COX4_pro PF03626.14 CTQ26737.1 - 2.8e-19 69.3 14.0 3.6e-19 68.9 14.0 1.1 1 0 0 1 1 1 1 Prokaryotic Cytochrome C oxidase subunit IV DUF1218 PF06749.12 CTQ26737.1 - 0.072 13.6 7.6 2.5 8.7 3.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1218) DUF3810 PF12725.7 CTQ26737.1 - 0.19 11.0 8.5 0.25 10.6 8.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF3040 PF11239.8 CTQ26737.1 - 0.52 10.6 4.4 0.73 10.1 2.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DUF3169 PF11368.8 CTQ26737.1 - 0.86 9.1 16.1 2.6 7.5 6.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) Presenilin PF01080.17 CTQ26737.1 - 1.8 7.2 12.5 1.8 7.2 12.5 1.0 1 0 0 1 1 1 0 Presenilin DUF5518 PF17647.1 CTQ26737.1 - 2.9 8.1 16.4 1.3 9.2 5.2 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5518) DUF2976 PF11190.8 CTQ26737.1 - 4.3 7.2 10.9 3 7.7 8.9 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) COX3 PF00510.18 CTQ26738.1 - 6.9e-17 62.1 16.3 9.3e-17 61.7 16.3 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III COX1 PF00115.20 CTQ26739.1 - 4.4e-136 454.2 73.7 4.4e-136 454.2 73.7 2.6 3 0 0 3 3 3 2 Cytochrome C and Quinol oxidase polypeptide I COX_ARM PF06481.14 CTQ26740.1 - 1e-17 63.8 1.8 2.2e-17 62.7 1.8 1.6 1 0 0 1 1 1 1 COX Aromatic Rich Motif COX2 PF00116.20 CTQ26740.1 - 2.7e-06 27.2 0.1 1e-05 25.4 0.0 2.0 1 1 1 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain COX2_TM PF02790.15 CTQ26740.1 - 0.005 17.0 0.3 0.0092 16.1 0.3 1.5 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, transmembrane domain FtsX PF02687.21 CTQ26740.1 - 0.0052 17.2 0.5 0.012 16.1 0.5 1.5 1 0 0 1 1 1 1 FtsX-like permease family Cupredoxin_1 PF13473.6 CTQ26740.1 - 0.011 15.8 0.0 0.036 14.2 0.0 1.8 1 1 0 1 1 1 0 Cupredoxin-like domain TspO_MBR PF03073.15 CTQ26740.1 - 0.067 13.3 4.3 0.12 12.5 4.3 1.4 1 0 0 1 1 1 0 TspO/MBR family Gram_pos_anchor PF00746.21 CTQ26740.1 - 2.2 8.3 3.8 0.55 10.2 0.3 1.8 2 0 0 2 2 2 0 LPXTG cell wall anchor motif MFS_1 PF07690.16 CTQ26741.1 - 2.9e-34 118.5 64.0 1e-29 103.6 37.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Acatn PF13000.7 CTQ26741.1 - 3.4e-12 45.7 10.5 5.1e-11 41.8 5.8 2.5 2 1 0 2 2 2 1 Acetyl-coenzyme A transporter 1 Lipoprotein_16 PF03923.13 CTQ26742.1 - 7.4e-54 181.7 2.9 8.4e-54 181.5 2.9 1.0 1 0 0 1 1 1 1 Uncharacterized lipoprotein LPAM_1 PF08139.12 CTQ26742.1 - 3.2e-05 24.2 0.5 7.7e-05 23.0 0.5 1.7 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site DUF3562 PF12085.8 CTQ26742.1 - 0.025 14.2 0.0 0.062 12.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) STN PF07660.14 CTQ26742.1 - 0.036 13.8 0.2 1.7 8.5 0.0 2.9 3 0 0 3 3 3 0 Secretin and TonB N terminus short domain AcylCoA_DH_N PF12418.8 CTQ26742.1 - 0.094 12.8 0.3 0.17 12.0 0.3 1.4 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase N terminal BolA PF01722.18 CTQ26743.1 - 2.5e-28 98.2 0.1 3e-28 97.9 0.1 1.1 1 0 0 1 1 1 1 BolA-like protein Trigger_N PF05697.13 CTQ26745.1 - 3.7e-42 144.0 0.6 3.7e-42 144.0 0.6 3.3 3 1 0 3 3 3 1 Bacterial trigger factor protein (TF) Trigger_C PF05698.14 CTQ26745.1 - 1.1e-40 139.3 11.1 1.1e-40 139.3 11.1 2.5 2 0 0 2 2 2 1 Bacterial trigger factor protein (TF) C-terminus FKBP_C PF00254.28 CTQ26745.1 - 1.9e-14 53.8 0.4 5.6e-14 52.2 0.4 1.8 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase SurA_N_3 PF13624.6 CTQ26745.1 - 0.013 15.3 2.4 0.024 14.4 1.4 2.1 3 1 0 3 3 3 0 SurA N-terminal domain DUF3811 PF11656.8 CTQ26745.1 - 0.081 13.3 1.4 0.14 12.5 0.1 2.1 2 0 0 2 2 2 0 YjbD family (DUF3811) DUF4172 PF13776.6 CTQ26745.1 - 0.11 12.9 0.7 5.5 7.4 0.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4172) Arabinose_Isome PF02610.15 CTQ26745.1 - 4.9 6.3 8.1 0.38 9.9 0.9 2.5 3 0 0 3 3 3 0 L-arabinose isomerase CLP_protease PF00574.23 CTQ26746.1 - 1.6e-89 298.6 0.1 1.8e-89 298.4 0.1 1.0 1 0 0 1 1 1 1 Clp protease AAA_2 PF07724.14 CTQ26747.1 - 1.6e-48 165.0 0.0 2.6e-48 164.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) zf-C4_ClpX PF06689.13 CTQ26747.1 - 4.5e-21 74.4 3.8 1.4e-20 72.9 3.8 1.9 1 0 0 1 1 1 1 ClpX C4-type zinc finger ClpB_D2-small PF10431.9 CTQ26747.1 - 3.4e-17 62.3 2.8 3.9e-17 62.1 0.7 2.2 3 0 0 3 3 2 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 CTQ26747.1 - 1.2e-15 58.1 0.1 3.7e-15 56.5 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 CTQ26747.1 - 2.5e-07 30.3 0.2 0.00014 21.3 0.5 3.1 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 CTQ26747.1 - 1e-06 28.8 0.0 8.7e-06 25.8 0.1 2.5 3 1 0 3 3 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 CTQ26747.1 - 1.6e-06 28.5 0.5 2e-05 24.9 0.2 2.8 2 1 0 2 2 2 1 AAA domain RuvB_N PF05496.12 CTQ26747.1 - 4.8e-06 26.4 0.1 1.6e-05 24.7 0.1 1.9 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 CTQ26747.1 - 5.9e-06 25.5 0.0 9.7e-06 24.8 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain AAA_16 PF13191.6 CTQ26747.1 - 0.00036 21.0 0.4 0.0012 19.2 0.0 2.1 2 1 0 2 2 2 1 AAA ATPase domain AAA_7 PF12775.7 CTQ26747.1 - 0.00073 19.1 0.0 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 CTQ26747.1 - 0.0008 19.1 0.0 0.15 11.8 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 CTQ26747.1 - 0.0038 17.4 0.0 0.0098 16.0 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain TIP49 PF06068.13 CTQ26747.1 - 0.0039 16.4 0.0 0.0092 15.2 0.0 1.6 1 1 0 1 1 1 1 TIP49 P-loop domain AAA_14 PF13173.6 CTQ26747.1 - 0.0049 16.9 0.0 0.011 15.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 CTQ26747.1 - 0.005 16.6 0.1 0.0083 15.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CTQ26747.1 - 0.0055 17.3 0.0 0.016 15.7 0.0 1.8 1 0 0 1 1 1 1 AAA domain T2SSE PF00437.20 CTQ26747.1 - 0.0068 15.5 0.0 0.014 14.5 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_21 PF13304.6 CTQ26747.1 - 0.0069 16.2 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 CTQ26747.1 - 0.0081 16.7 0.0 0.025 15.1 0.0 1.9 2 0 0 2 2 1 1 ABC transporter NACHT PF05729.12 CTQ26747.1 - 0.0081 16.1 0.0 0.16 11.9 0.0 2.6 2 0 0 2 2 2 1 NACHT domain IstB_IS21 PF01695.17 CTQ26747.1 - 0.0086 15.8 0.1 0.017 14.8 0.1 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein ATPase PF06745.13 CTQ26747.1 - 0.012 14.9 0.2 2.2 7.6 0.0 2.5 2 0 0 2 2 2 0 KaiC AAA_33 PF13671.6 CTQ26747.1 - 0.022 14.9 0.0 0.046 13.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 CTQ26747.1 - 0.043 13.8 0.1 0.097 12.7 0.1 1.6 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_29 PF13555.6 CTQ26747.1 - 0.059 13.1 0.1 0.14 11.9 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ResIII PF04851.15 CTQ26747.1 - 0.079 12.9 0.1 0.31 11.0 0.1 2.1 2 1 0 2 2 1 0 Type III restriction enzyme, res subunit DUF1296 PF06972.11 CTQ26747.1 - 0.091 12.9 0.1 0.41 10.8 0.0 2.2 2 0 0 2 2 1 0 Protein of unknown function (DUF1296) AAA_PrkA PF08298.11 CTQ26747.1 - 0.12 11.3 0.0 0.19 10.6 0.0 1.3 1 0 0 1 1 1 0 PrkA AAA domain AAA_28 PF13521.6 CTQ26747.1 - 0.12 12.6 0.0 0.3 11.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 CTQ26747.1 - 0.12 11.8 0.0 0.32 10.4 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein DEAD PF00270.29 CTQ26747.1 - 0.13 12.1 1.3 0.54 10.0 1.3 2.4 1 1 0 1 1 1 0 DEAD/DEAH box helicase RNA_helicase PF00910.22 CTQ26747.1 - 0.13 12.7 0.0 0.36 11.3 0.0 1.8 1 1 0 1 1 1 0 RNA helicase AAA_8 PF12780.7 CTQ26747.1 - 0.16 11.3 0.0 0.35 10.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 AAA_19 PF13245.6 CTQ26747.1 - 0.16 12.3 2.3 3.7 7.9 0.2 3.1 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 CTQ26747.1 - 0.62 10.5 2.2 1.2 9.6 2.2 1.8 1 1 0 1 1 1 0 AAA domain Lon_C PF05362.13 CTQ26748.1 - 4.1e-98 327.0 0.1 6.9e-98 326.2 0.1 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain LON_substr_bdg PF02190.16 CTQ26748.1 - 1.9e-42 145.5 0.2 1.9e-42 145.5 0.2 1.8 2 0 0 2 2 2 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 CTQ26748.1 - 6.9e-18 65.3 0.0 1.6e-17 64.1 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 CTQ26748.1 - 3.4e-10 40.1 0.0 1.3e-09 38.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) ChlI PF13541.6 CTQ26748.1 - 2.9e-07 30.3 0.0 6.9e-07 29.1 0.0 1.7 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_PrkA PF08298.11 CTQ26748.1 - 1e-05 24.7 0.0 1.9e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 PrkA AAA domain AAA_16 PF13191.6 CTQ26748.1 - 6.7e-05 23.3 0.0 0.00047 20.6 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain IstB_IS21 PF01695.17 CTQ26748.1 - 0.00061 19.6 0.0 0.0017 18.1 0.0 1.7 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_3 PF07726.11 CTQ26748.1 - 0.0013 18.6 0.0 0.0039 17.1 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 CTQ26748.1 - 0.0042 16.9 0.0 0.025 14.3 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 CTQ26748.1 - 0.0096 16.2 0.2 0.1 12.8 0.2 2.5 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.14 CTQ26748.1 - 0.011 15.9 0.0 0.046 13.8 0.0 2.1 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) NACHT PF05729.12 CTQ26748.1 - 0.016 15.2 0.1 0.36 10.7 0.0 2.5 2 0 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 CTQ26748.1 - 0.016 15.7 0.1 0.016 15.7 0.1 2.6 2 1 0 3 3 2 0 AAA domain AAA_14 PF13173.6 CTQ26748.1 - 0.017 15.1 0.0 0.052 13.6 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CTQ26748.1 - 0.049 13.8 0.6 0.13 12.4 0.1 1.9 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 CTQ26748.1 - 0.06 13.2 0.0 0.18 11.7 0.0 1.8 1 0 0 1 1 1 0 RsgA GTPase ClpB_D2-small PF10431.9 CTQ26748.1 - 0.078 13.0 0.8 0.28 11.3 0.8 2.0 1 0 0 1 1 1 0 C-terminal, D2-small domain, of ClpB protein RNA_helicase PF00910.22 CTQ26748.1 - 0.11 12.8 0.0 0.54 10.7 0.0 2.2 2 0 0 2 2 2 0 RNA helicase Phage_GP20 PF06810.11 CTQ26748.1 - 0.12 12.1 7.2 0.32 10.8 7.2 1.7 1 0 0 1 1 1 0 Phage minor structural protein GP20 TsaE PF02367.17 CTQ26748.1 - 0.14 12.2 0.0 0.3 11.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ECH_2 PF16113.5 CTQ26748.1 - 0.18 11.3 1.9 0.46 9.9 1.9 1.7 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase T3SSipB PF16535.5 CTQ26748.1 - 0.3 11.6 4.7 0.67 10.4 4.7 1.7 1 0 0 1 1 1 0 Type III cell invasion protein SipB Bac_DNA_binding PF00216.21 CTQ26749.1 - 5.1e-33 113.1 0.0 5.6e-33 113.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 CTQ26749.1 - 3.1e-07 30.5 0.0 3.3e-07 30.4 0.0 1.0 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 CTQ26749.1 - 0.0082 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 CTQ26749.1 - 0.018 15.1 0.0 0.027 14.6 0.0 1.2 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 CTQ26749.1 - 0.1 12.8 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 1 SurA_N_3 PF13624.6 CTQ26750.1 - 7.4e-52 175.4 10.3 7.4e-52 175.4 10.3 2.8 2 1 1 3 3 3 1 SurA N-terminal domain SurA_N_2 PF13623.6 CTQ26750.1 - 2.5e-35 121.5 6.7 2.5e-35 121.5 6.7 3.4 2 1 2 4 4 4 1 SurA N-terminal domain Rotamase_2 PF13145.6 CTQ26750.1 - 2.1e-34 118.9 23.0 2.3e-24 86.5 0.6 5.3 3 3 2 5 5 5 4 PPIC-type PPIASE domain Rotamase_3 PF13616.6 CTQ26750.1 - 1.1e-16 61.5 5.6 1.7e-14 54.3 0.4 3.8 2 1 0 2 2 2 2 PPIC-type PPIASE domain Rotamase PF00639.21 CTQ26750.1 - 4.6e-13 49.9 0.1 4.6e-13 49.9 0.1 4.3 4 1 0 4 4 4 1 PPIC-type PPIASE domain SurA_N PF09312.11 CTQ26750.1 - 1.8e-08 34.5 4.4 7.2e-08 32.5 4.4 2.1 1 0 0 1 1 1 1 SurA N-terminal domain CFTR_R PF14396.6 CTQ26750.1 - 1 8.8 5.6 0.26 10.8 1.8 1.9 2 0 0 2 2 2 0 Cystic fibrosis TM conductance regulator (CFTR), regulator domain DnaI_N PF07319.11 CTQ26750.1 - 6.6 7.5 8.5 27 5.5 0.1 3.7 2 1 1 3 3 3 0 Primosomal protein DnaI N-terminus HHH_3 PF12836.7 CTQ26751.1 - 7.4e-20 71.0 0.0 9.9e-20 70.6 0.0 1.2 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 CTQ26751.1 - 5.7e-10 38.6 0.1 1.8e-05 24.4 0.0 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif T2SSK PF03934.13 CTQ26751.1 - 0.0001 21.8 0.0 0.00013 21.4 0.0 1.2 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein K HHH_6 PF14579.6 CTQ26751.1 - 0.00028 21.1 0.0 0.00095 19.4 0.0 2.1 1 1 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 CTQ26751.1 - 0.0013 19.3 0.0 0.85 10.3 0.0 2.4 2 0 0 2 2 2 2 Helix-hairpin-helix domain HRDC PF00570.23 CTQ26751.1 - 0.081 12.9 0.0 0.41 10.7 0.0 1.9 2 0 0 2 2 2 0 HRDC domain Acyl-ACP_TE PF01643.17 CTQ26752.1 - 3.1e-15 56.1 0.1 4.8e-07 29.3 0.0 2.0 1 1 1 2 2 2 2 Acyl-ACP thioesterase 4HBT PF03061.22 CTQ26752.1 - 5.5e-15 55.5 0.0 7.2e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 CTQ26752.1 - 1.5e-14 54.5 0.0 1.8e-14 54.3 0.0 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily MaoC_dehydrat_N PF13452.6 CTQ26752.1 - 0.084 13.0 0.0 0.17 12.0 0.0 1.5 1 1 1 2 2 2 0 N-terminal half of MaoC dehydratase SdrG_C_C PF10425.9 CTQ26752.1 - 0.12 12.5 0.0 0.25 11.4 0.0 1.5 2 0 0 2 2 2 0 C-terminus of bacterial fibrinogen-binding adhesin QueC PF06508.13 CTQ26753.1 - 1.6e-83 279.3 0.0 1.9e-83 279.1 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Arginosuc_synth PF00764.19 CTQ26753.1 - 1.1e-05 24.9 0.1 1.8e-05 24.2 0.1 1.3 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.21 CTQ26753.1 - 0.0036 17.0 0.0 0.0054 16.4 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.20 CTQ26753.1 - 0.012 15.4 0.1 0.019 14.7 0.1 1.3 1 0 0 1 1 1 0 PP-loop family Diphthami_syn_2 PF01902.17 CTQ26753.1 - 0.052 13.0 0.0 0.08 12.4 0.0 1.4 1 0 0 1 1 1 0 Diphthamide synthase PAPS_reduct PF01507.19 CTQ26753.1 - 0.078 13.0 0.0 0.15 12.1 0.0 1.5 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.17 CTQ26753.1 - 0.12 11.5 0.0 0.18 10.9 0.0 1.3 1 0 0 1 1 1 0 NAD synthase ThiI PF02568.14 CTQ26753.1 - 0.13 11.8 0.0 0.43 10.1 0.0 1.9 1 1 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) SgrR_N PF12793.7 CTQ26754.1 - 3.5e-37 127.1 2.8 6.8e-37 126.2 2.8 1.5 1 0 0 1 1 1 1 Sugar transport-related sRNA regulator N-term SBP_bac_5 PF00496.22 CTQ26754.1 - 5.2e-15 55.3 0.0 1e-14 54.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle MarR_2 PF12802.7 CTQ26754.1 - 0.0032 17.3 0.2 0.055 13.4 0.1 2.7 3 0 0 3 3 3 1 MarR family HTH_AraC PF00165.23 CTQ26754.1 - 0.013 15.6 0.0 3.3 7.9 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_28 PF13518.6 CTQ26754.1 - 0.015 15.4 0.2 0.037 14.1 0.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 CTQ26754.1 - 0.037 14.4 0.0 0.2 12.0 0.0 2.0 2 0 0 2 2 2 0 Transcriptional regulator Hydrolase_3 PF08282.12 CTQ26755.1 - 9.5e-54 182.8 0.0 1.1e-53 182.6 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 CTQ26755.1 - 5.7e-22 78.4 0.0 2.1e-12 47.1 0.0 2.1 1 1 1 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 CTQ26755.1 - 3.7e-07 30.7 0.0 3.9e-06 27.3 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.16 CTQ26755.1 - 0.02 14.0 0.0 0.52 9.4 0.0 2.2 2 0 0 2 2 2 0 Trehalose-phosphatase HAD PF12710.7 CTQ26755.1 - 0.029 14.8 0.4 4.3 7.7 0.0 2.6 2 2 0 2 2 2 0 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 CTQ26755.1 - 0.1 12.8 0.0 0.18 12.0 0.0 1.5 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase PALP PF00291.25 CTQ26756.1 - 9.1e-44 150.0 0.0 1.1e-43 149.8 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme AsnC_trans_reg PF01037.21 CTQ26757.1 - 6.8e-21 74.0 0.0 9.7e-21 73.5 0.0 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 CTQ26757.1 - 7.7e-17 60.6 0.4 1.4e-16 59.7 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 CTQ26757.1 - 1.5e-16 59.9 0.6 3.3e-16 58.8 0.6 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 CTQ26757.1 - 0.00087 19.2 0.1 0.0014 18.5 0.1 1.3 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.6 CTQ26757.1 - 0.0035 17.3 0.1 0.0079 16.1 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Fiji_64_capsid PF05880.11 CTQ26757.1 - 0.018 13.7 0.0 0.02 13.5 0.0 1.1 1 0 0 1 1 1 0 Fijivirus 64 kDa capsid protein DDRGK PF09756.9 CTQ26757.1 - 0.063 12.9 0.0 0.087 12.4 0.0 1.2 1 0 0 1 1 1 0 DDRGK domain HTH_20 PF12840.7 CTQ26757.1 - 0.085 12.9 0.3 0.15 12.2 0.3 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.22 CTQ26757.1 - 0.098 12.6 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 MarR family DUF2783 PF10932.8 CTQ26757.1 - 0.12 12.1 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2783) ABC_membrane PF00664.23 CTQ26758.1 - 6.2e-36 124.4 3.8 7.7e-36 124.1 3.8 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 CTQ26758.1 - 1.4e-29 103.3 0.0 2.5e-29 102.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 CTQ26758.1 - 0.00071 19.5 0.0 0.0015 18.5 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 CTQ26758.1 - 0.00098 18.6 0.0 0.043 13.3 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CTQ26758.1 - 0.0018 18.8 0.0 0.0033 18.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CTQ26758.1 - 0.0029 18.2 0.1 0.076 13.6 0.0 2.7 3 0 0 3 3 3 1 AAA domain AAA_22 PF13401.6 CTQ26758.1 - 0.0063 16.8 0.3 0.03 14.6 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ26758.1 - 0.018 14.8 0.0 0.042 13.6 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 CTQ26758.1 - 0.043 13.7 0.0 0.077 12.9 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_21 PF13304.6 CTQ26758.1 - 0.097 12.5 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Herpes_LMP1 PF05297.11 CTQ26758.1 - 1.2 8.2 4.1 2.6 7.2 4.1 1.4 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) ABC_membrane PF00664.23 CTQ26759.1 - 2.6e-39 135.6 9.1 3.6e-39 135.1 9.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 CTQ26759.1 - 2.5e-29 102.5 0.0 4.7e-29 101.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 CTQ26759.1 - 3.8e-08 33.1 0.1 4.5e-05 23.0 0.2 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ26759.1 - 0.00086 19.6 0.2 0.0039 17.5 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ26759.1 - 0.00095 19.6 1.6 0.003 18.0 1.6 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ26759.1 - 0.0083 15.9 0.6 0.023 14.4 0.1 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 CTQ26759.1 - 0.02 15.0 0.3 0.16 12.1 0.3 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_25 PF13481.6 CTQ26759.1 - 0.045 13.3 4.0 0.16 11.5 1.6 2.8 2 1 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 CTQ26759.1 - 0.051 13.5 0.0 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase IstB_IS21 PF01695.17 CTQ26759.1 - 0.057 13.2 0.4 4.4 7.0 0.0 2.6 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF87 PF01935.17 CTQ26759.1 - 0.057 13.5 0.2 0.14 12.2 0.1 1.6 2 0 0 2 2 2 0 Helicase HerA, central domain DEAD PF00270.29 CTQ26759.1 - 0.095 12.5 1.1 1.9 8.2 1.1 2.3 1 1 0 1 1 1 0 DEAD/DEAH box helicase AAA_23 PF13476.6 CTQ26759.1 - 0.098 13.1 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 CTQ26759.1 - 0.12 11.5 0.0 0.27 10.4 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain AAA PF00004.29 CTQ26759.1 - 0.16 12.4 0.3 1.9 8.9 0.2 2.5 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 CTQ26759.1 - 0.19 11.9 1.1 0.44 10.7 1.1 1.8 1 1 0 1 1 1 0 AAA domain YbhQ PF11076.8 CTQ26759.1 - 9.8 6.2 10.2 0.23 11.5 1.1 2.8 2 1 1 3 3 3 0 Putative inner membrane protein YbhQ P-II PF00543.22 CTQ26760.1 - 1.8e-41 140.8 1.2 2.1e-41 140.7 1.2 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF3240 PF11582.8 CTQ26760.1 - 0.072 13.2 0.0 0.12 12.5 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3240) Ammonium_transp PF00909.21 CTQ26761.1 - 2e-126 421.9 43.0 2.2e-126 421.8 43.0 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Acyl_CoA_thio PF02551.15 CTQ26762.1 - 2.8e-64 214.9 0.0 1.9e-48 163.7 0.0 3.0 2 1 0 2 2 2 2 Acyl-CoA thioesterase 4HBT_3 PF13622.6 CTQ26762.1 - 1.8e-58 198.7 0.0 2.2e-58 198.4 0.0 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.22 CTQ26762.1 - 0.00071 19.9 0.0 0.013 15.9 0.0 2.2 2 0 0 2 2 2 1 Thioesterase superfamily YscW PF09619.10 CTQ26763.1 - 1.1e-41 141.6 0.3 1.4e-41 141.1 0.3 1.2 1 0 0 1 1 1 1 Type III secretion system lipoprotein chaperone (YscW) DNA_binding_1 PF01035.20 CTQ26764.1 - 6.2e-26 90.3 0.1 7.3e-26 90.1 0.1 1.1 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain DUF1654 PF07867.11 CTQ26764.1 - 0.15 11.8 0.0 2.4 7.9 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1654) DUF2274 PF10038.9 CTQ26766.1 - 0.014 15.9 0.1 0.022 15.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2274) Aminotran_1_2 PF00155.21 CTQ26768.1 - 1.5e-27 96.8 0.0 1.9e-27 96.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 CTQ26768.1 - 4.5e-16 58.2 1.0 4.5e-16 58.2 1.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 CTQ26768.1 - 0.00026 21.3 0.0 0.00061 20.1 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_Crp_2 PF13545.6 CTQ26768.1 - 0.00031 20.6 0.3 0.0014 18.5 0.2 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 CTQ26768.1 - 0.00043 20.2 0.1 0.00098 19.0 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_28 PF13518.6 CTQ26768.1 - 0.0042 17.2 0.8 0.0099 16.0 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 CTQ26768.1 - 0.0047 16.5 0.3 0.017 14.7 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 CTQ26768.1 - 0.007 16.3 0.1 0.016 15.1 0.1 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 CTQ26768.1 - 0.022 14.6 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 CTQ26768.1 - 0.046 13.6 0.6 0.77 9.7 0.1 2.6 2 0 0 2 2 2 0 MarR family HTH_27 PF13463.6 CTQ26768.1 - 0.099 13.2 0.0 0.24 11.9 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_29 PF13551.6 CTQ26768.1 - 0.11 12.5 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix Fe_dep_repress PF01325.19 CTQ26768.1 - 0.2 11.9 0.0 0.5 10.6 0.0 1.7 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain YitT_membrane PF02588.15 CTQ26769.1 - 0.012 15.0 12.6 0.027 13.8 2.8 2.4 1 1 2 3 3 3 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NicO PF03824.16 CTQ26770.1 - 1.5e-44 152.5 17.2 2.2e-44 151.9 17.2 1.2 1 0 0 1 1 1 1 High-affinity nickel-transport protein SfLAP PF11139.8 CTQ26770.1 - 3e-09 36.6 0.0 1.1e-08 34.8 0.0 2.0 1 1 0 1 1 1 1 Sap, sulfolipid-1-addressing protein DsbD_2 PF13386.6 CTQ26770.1 - 2.2e-07 31.0 19.3 1.6e-06 28.2 4.5 3.2 2 2 2 4 4 4 3 Cytochrome C biogenesis protein transmembrane region DsbD PF02683.15 CTQ26770.1 - 0.00022 21.2 1.5 0.00022 21.2 1.5 2.0 2 0 0 2 2 2 1 Cytochrome C biogenesis protein transmembrane region TauE PF01925.19 CTQ26770.1 - 0.00064 19.4 14.9 0.003 17.2 10.6 2.4 1 1 1 2 2 2 1 Sulfite exporter TauE/SafE FAM176 PF14851.6 CTQ26770.1 - 0.0011 18.6 1.5 0.024 14.3 0.6 2.2 2 0 0 2 2 2 1 FAM176 family FAM76 PF16046.5 CTQ26770.1 - 0.012 15.0 4.7 0.016 14.6 4.7 1.1 1 0 0 1 1 1 0 FAM76 protein Abhydrolase_9_N PF15420.6 CTQ26770.1 - 0.021 14.8 11.7 0.03 14.3 4.4 2.3 2 0 0 2 2 2 0 Alpha/beta-hydrolase family N-terminus SARAF PF06682.12 CTQ26770.1 - 0.062 12.9 0.0 0.088 12.4 0.0 1.2 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Cation_efflux PF01545.21 CTQ26770.1 - 0.072 12.8 7.3 0.12 12.1 0.3 3.1 2 2 1 3 3 3 0 Cation efflux family CDC48_2 PF02933.17 CTQ26770.1 - 0.086 12.6 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 V_ATPase_I PF01496.19 CTQ26770.1 - 0.16 9.9 3.7 0.22 9.4 3.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4199 PF13858.6 CTQ26770.1 - 0.49 10.8 4.5 3.8 7.9 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) Apc15p PF05841.11 CTQ26770.1 - 2.2 9.1 8.5 3.3 8.5 8.5 1.2 1 0 0 1 1 1 0 Apc15p protein DUF308 PF03729.13 CTQ26770.1 - 4.9 7.5 24.0 2.6 8.4 5.7 3.3 3 2 0 3 3 2 0 Short repeat of unknown function (DUF308) Tetraspanin PF00335.20 CTQ26770.1 - 6.3 6.4 7.6 4.6 6.9 2.5 2.5 2 1 0 2 2 2 0 Tetraspanin family Trns_repr_metal PF02583.17 CTQ26771.1 - 1.1e-21 76.9 4.1 1.7e-21 76.4 4.1 1.2 1 0 0 1 1 1 1 Metal-sensitive transcriptional repressor Img2 PF05046.14 CTQ26771.1 - 0.0069 16.7 0.2 0.012 15.9 0.2 1.4 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) MCC-bdg_PDZ PF10506.9 CTQ26771.1 - 0.042 13.9 0.5 0.064 13.3 0.5 1.3 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome EAL PF00563.20 CTQ26772.1 - 2e-63 214.1 0.0 3.3e-63 213.4 0.0 1.4 1 0 0 1 1 1 1 EAL domain CSS-motif PF12792.7 CTQ26772.1 - 5.9e-41 140.2 1.7 9e-41 139.7 1.7 1.3 1 0 0 1 1 1 1 CSS motif domain associated with EAL Complex1_LYR_1 PF13232.6 CTQ26772.1 - 0.035 14.7 0.2 0.072 13.7 0.2 1.5 1 0 0 1 1 1 0 Complex1_LYR-like TMEMspv1-c74-12 PF11044.8 CTQ26772.1 - 0.13 12.3 0.3 0.13 12.3 0.3 2.0 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein ABC_tran PF00005.27 CTQ26773.1 - 9.6e-34 116.8 0.0 1.5e-33 116.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 CTQ26773.1 - 1.8e-11 44.7 0.0 5.6e-11 43.1 0.0 2.0 1 0 0 1 1 1 1 MalK OB fold domain AAA_21 PF13304.6 CTQ26773.1 - 5.2e-05 23.2 0.0 0.007 16.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ26773.1 - 9.3e-05 22.4 0.0 0.0002 21.3 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase TOBE_2 PF08402.10 CTQ26773.1 - 0.0003 20.9 0.0 0.0017 18.5 0.0 2.3 1 1 1 2 2 2 2 TOBE domain SMC_N PF02463.19 CTQ26773.1 - 0.00086 18.8 0.3 0.015 14.8 0.1 2.5 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ26773.1 - 0.0014 18.3 0.0 0.0042 16.8 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 CTQ26773.1 - 0.0027 17.9 0.0 0.0064 16.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ26773.1 - 0.0031 17.9 0.0 0.0072 16.7 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ26773.1 - 0.0033 17.7 0.1 0.009 16.3 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 CTQ26773.1 - 0.011 16.3 0.0 0.018 15.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 CTQ26773.1 - 0.017 14.6 0.1 1.9 7.9 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein PEPCK_ATP PF01293.20 CTQ26773.1 - 0.021 13.5 0.1 0.54 8.9 0.0 2.0 2 0 0 2 2 2 0 Phosphoenolpyruvate carboxykinase CysA_C_terminal PF17850.1 CTQ26773.1 - 0.021 15.4 0.1 0.12 13.0 0.0 2.3 2 0 0 2 2 2 0 CysA C-terminal regulatory domain AAA_15 PF13175.6 CTQ26773.1 - 0.025 14.3 0.0 0.04 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_28 PF13521.6 CTQ26773.1 - 0.026 14.8 0.0 0.05 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ26773.1 - 0.05 13.2 0.1 0.11 12.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 CTQ26773.1 - 0.063 13.0 0.0 0.13 12.0 0.0 1.7 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 CTQ26773.1 - 0.065 13.2 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA PF00004.29 CTQ26773.1 - 0.08 13.4 0.0 0.19 12.2 0.0 1.6 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 CTQ26773.1 - 0.15 12.0 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 CTQ26773.1 - 0.16 11.9 0.0 0.41 10.5 0.0 1.7 1 0 0 1 1 1 0 NACHT domain AAA_27 PF13514.6 CTQ26773.1 - 0.18 11.4 0.0 0.62 9.6 0.0 1.9 3 0 0 3 3 3 0 AAA domain DUF5380 PF17351.2 CTQ26774.1 - 0.096 12.6 0.1 0.096 12.6 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5380) SBP_bac_8 PF13416.6 CTQ26775.1 - 3.8e-50 171.3 6.4 4.9e-50 170.9 6.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ26775.1 - 4.7e-33 115.5 13.1 6.5e-33 115.0 13.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ26775.1 - 0.0029 17.0 0.1 1.5 8.2 0.0 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 CTQ26776.1 - 5.4e-22 78.4 23.7 5.4e-22 78.4 23.7 3.1 1 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ26777.1 - 1.9e-19 70.2 14.0 1.9e-19 70.2 14.0 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Glyco_hydro_53 PF07745.13 CTQ26778.1 - 5.1e-125 416.9 1.2 5.9e-125 416.8 1.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 53 Cellulase PF00150.18 CTQ26778.1 - 0.00013 21.5 0.0 0.0003 20.3 0.0 1.6 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Glyco_hydro_cc PF11790.8 CTQ26778.1 - 0.0037 16.8 0.2 0.01 15.4 0.1 1.7 2 0 0 2 2 2 1 Glycosyl hydrolase catalytic core Glyco_hydro_42 PF02449.15 CTQ26779.1 - 3.1e-154 513.9 3.8 3.8e-154 513.5 3.8 1.1 1 0 0 1 1 1 1 Beta-galactosidase Glyco_hydro_42M PF08532.10 CTQ26779.1 - 2.6e-73 245.9 0.0 4.2e-73 245.3 0.0 1.3 1 0 0 1 1 1 1 Beta-galactosidase trimerisation domain Glyco_hydro_42C PF08533.10 CTQ26779.1 - 8.4e-10 38.2 0.0 1.6e-09 37.3 0.0 1.5 1 0 0 1 1 1 1 Beta-galactosidase C-terminal domain DUF4434 PF14488.6 CTQ26779.1 - 0.043 13.8 0.2 0.14 12.1 0.2 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4434) Glyco_hydro_14 PF01373.17 CTQ26779.1 - 0.045 12.7 0.1 0.08 11.9 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 14 PTS_EIIB PF00367.20 CTQ26780.1 - 3.1e-11 42.6 0.0 4.6e-11 42.0 0.0 1.2 1 0 0 1 1 1 1 phosphotransferase system, EIIB PspB PF06667.12 CTQ26780.1 - 0.046 13.8 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Phage shock protein B PT-VENN PF04829.13 CTQ26780.1 - 0.047 13.8 0.1 0.081 13.0 0.1 1.4 1 0 0 1 1 1 0 Pre-toxin domain with VENN motif LamB PF02264.15 CTQ26781.1 - 7e-111 371.8 15.3 7.9e-111 371.6 15.3 1.0 1 0 0 1 1 1 1 LamB porin Peripla_BP_3 PF13377.6 CTQ26782.1 - 5.7e-30 104.8 0.0 1.6e-29 103.4 0.0 1.7 2 0 0 2 2 2 1 Periplasmic binding protein-like domain LacI PF00356.21 CTQ26782.1 - 1.8e-18 66.1 4.1 3e-18 65.3 1.6 2.8 3 0 0 3 3 3 1 Bacterial regulatory proteins, lacI family Peripla_BP_1 PF00532.21 CTQ26782.1 - 1.2e-16 60.9 0.0 1.7e-16 60.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 CTQ26782.1 - 7.8e-15 55.1 0.0 1.1e-14 54.7 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_Tnp_ISL3 PF13542.6 CTQ26782.1 - 0.00079 18.8 0.1 0.0037 16.6 0.0 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 HTH_31 PF13560.6 CTQ26782.1 - 0.002 18.5 1.5 0.013 15.8 0.2 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ26782.1 - 0.0059 16.6 0.1 0.022 14.7 0.1 2.0 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_23 PF13384.6 CTQ26782.1 - 0.0064 16.2 1.2 0.028 14.2 0.1 2.6 3 0 0 3 3 3 1 Homeodomain-like domain HTH_3 PF01381.22 CTQ26782.1 - 0.0085 16.1 1.8 0.013 15.5 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_38 PF13936.6 CTQ26782.1 - 0.015 15.1 0.5 0.26 11.1 0.0 2.9 3 1 0 3 3 3 0 Helix-turn-helix domain TrmB PF01978.19 CTQ26782.1 - 0.02 14.8 0.3 0.051 13.5 0.3 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_10 PF04967.12 CTQ26782.1 - 0.022 14.6 0.0 0.059 13.2 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain HTH_AraC PF00165.23 CTQ26782.1 - 0.026 14.6 0.0 0.058 13.5 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family DUF3069 PF11269.8 CTQ26782.1 - 0.03 14.5 0.4 0.2 11.9 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3069) HTH_35 PF13693.6 CTQ26782.1 - 0.053 13.6 0.2 0.22 11.6 0.2 2.1 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 CTQ26782.1 - 0.073 13.2 0.0 0.61 10.3 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain Nterm_IS4 PF13006.7 CTQ26782.1 - 0.085 13.1 0.1 0.36 11.1 0.0 2.0 2 0 0 2 2 2 0 Insertion element 4 transposase N-terminal NAD_binding_11 PF14833.6 CTQ26782.1 - 0.089 13.0 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Alb1 PF09135.11 CTQ26782.1 - 0.11 13.4 0.6 0.22 12.4 0.6 1.5 1 0 0 1 1 1 0 Alb1 IL31 PF15209.6 CTQ26782.1 - 0.26 11.1 1.1 0.53 10.1 0.6 1.7 2 0 0 2 2 2 0 Interleukin 31 Ribosomal_L31 PF01197.18 CTQ26783.1 - 1.1e-22 80.0 0.4 1.4e-22 79.7 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L31 Ribosomal_L36 PF00444.18 CTQ26784.1 - 5.3e-16 58.5 2.5 7.2e-16 58.1 2.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L36 Acetyltransf_3 PF13302.7 CTQ26785.1 - 1.3e-16 61.5 0.1 1.8e-16 61.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ26785.1 - 0.002 18.3 0.0 0.0032 17.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 CTQ26785.1 - 0.0043 17.2 0.0 0.0057 16.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Aminotran_1_2 PF00155.21 CTQ26786.1 - 5.5e-22 78.4 0.0 8.4e-22 77.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 CTQ26786.1 - 9.6e-11 41.2 1.7 1.7e-10 40.4 0.4 2.2 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 CTQ26786.1 - 0.0016 18.4 0.9 0.0092 15.9 0.3 2.5 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 CTQ26786.1 - 0.0034 16.9 0.2 0.0088 15.6 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ26786.1 - 0.035 14.0 6.5 0.13 12.1 0.2 3.8 3 1 1 4 4 4 0 MarR family DUF1400 PF07176.11 CTQ26786.1 - 0.041 14.2 0.1 0.19 12.0 0.0 2.1 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1400) TetR_C_6 PF13977.6 CTQ26786.1 - 0.049 13.9 5.5 0.1 12.8 0.3 2.9 3 0 0 3 3 3 0 BetI-type transcriptional repressor, C-terminal MarR PF01047.22 CTQ26786.1 - 0.097 12.6 0.0 0.27 11.2 0.0 1.7 1 0 0 1 1 1 0 MarR family OrfB_IS605 PF01385.19 CTQ26786.1 - 0.098 12.9 3.6 0.29 11.4 3.6 1.7 1 0 0 1 1 1 0 Probable transposase HTH_36 PF13730.6 CTQ26786.1 - 0.11 12.5 0.0 0.29 11.1 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_41 PF14502.6 CTQ26786.1 - 0.14 11.8 0.0 0.36 10.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain YlaC PF10777.9 CTQ26787.1 - 7.5e-69 230.5 1.0 8.4e-69 230.3 1.0 1.0 1 0 0 1 1 1 1 Inner membrane protein YlaC DUF5542 PF17696.1 CTQ26787.1 - 2.3 8.4 5.0 4.6 7.5 5.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5542) Mac PF12464.8 CTQ26788.1 - 2.8e-19 69.1 0.5 4.6e-19 68.4 0.5 1.3 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep_2 PF14602.6 CTQ26788.1 - 1.2e-15 57.0 7.6 4.1e-11 42.4 2.8 2.5 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 CTQ26788.1 - 1.9e-14 52.7 8.6 1.3e-10 40.6 5.9 2.5 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) HHA PF05321.11 CTQ26789.1 - 1.9e-33 114.5 0.3 2.2e-33 114.3 0.3 1.0 1 0 0 1 1 1 1 Haemolysin expression modulating protein Pcc1 PF09341.10 CTQ26789.1 - 0.1 12.8 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Transcription factor Pcc1 YbaJ PF10757.9 CTQ26790.1 - 9.6e-63 210.0 1.3 1.1e-62 209.8 1.3 1.0 1 0 0 1 1 1 1 Biofilm formation regulator YbaJ PCNA_C PF02747.15 CTQ26790.1 - 0.039 14.1 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Proliferating cell nuclear antigen, C-terminal domain ACR_tran PF00873.19 CTQ26791.1 - 0 1440.4 14.6 0 1440.2 14.6 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 CTQ26791.1 - 3.2e-09 36.2 28.4 1.3e-06 27.6 12.0 2.4 2 0 0 2 2 2 2 MMPL family SecD_SecF PF02355.16 CTQ26791.1 - 4.9e-06 26.1 26.6 0.0029 17.0 5.1 2.4 2 0 0 2 2 2 2 Protein export membrane protein HlyD_D23 PF16576.5 CTQ26792.1 - 4.2e-13 49.0 2.9 6.6e-12 45.1 2.9 2.7 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 CTQ26792.1 - 1.3e-09 37.8 1.2 2.4e-09 36.9 1.2 1.6 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS HlyD_3 PF13437.6 CTQ26792.1 - 8.8e-09 36.0 4.5 1.7e-06 28.6 0.2 3.3 3 2 0 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 CTQ26792.1 - 3.5e-08 33.2 4.5 0.00047 19.9 0.1 3.6 3 0 0 3 3 3 2 Biotin-lipoyl like TetR_C_2 PF08361.11 CTQ26793.1 - 5.3e-52 175.0 0.8 7.7e-52 174.5 0.8 1.2 1 0 0 1 1 1 1 MAATS-type transcriptional repressor, C-terminal region TetR_N PF00440.23 CTQ26793.1 - 3.7e-20 71.4 0.0 6.1e-20 70.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family DUF4118 PF13493.6 CTQ26793.1 - 0.073 12.9 0.0 0.2 11.5 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) MscS_TM PF12794.7 CTQ26794.1 - 1.2e-92 310.4 33.3 1.2e-92 310.4 33.3 2.1 2 0 0 2 2 2 1 Mechanosensitive ion channel inner membrane domain 1 MscS_porin PF12795.7 CTQ26794.1 - 2.7e-65 220.2 60.5 2.7e-65 220.2 60.5 3.1 3 1 0 3 3 3 1 Mechanosensitive ion channel porin domain MS_channel PF00924.18 CTQ26794.1 - 1.4e-58 197.9 0.4 1.4e-58 197.9 0.4 2.5 2 0 0 2 2 2 1 Mechanosensitive ion channel DUF1657 PF07870.11 CTQ26794.1 - 0.12 12.2 5.0 0.13 12.2 1.7 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1657) RPW8 PF05659.11 CTQ26794.1 - 0.48 10.1 4.4 3.9 7.2 1.3 3.0 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Transposase_31 PF04754.12 CTQ26795.1 - 9.1e-85 283.4 0.1 1.2e-84 283.0 0.1 1.2 1 0 0 1 1 1 1 Putative transposase, YhgA-like DUF1127 PF06568.11 CTQ26795.1 - 0.12 12.1 0.2 0.12 12.1 0.2 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1127) TetR_C_11 PF16859.5 CTQ26795.1 - 0.28 11.5 7.9 0.73 10.2 1.8 3.5 2 1 1 3 3 3 0 Tetracyclin repressor-like, C-terminal domain DUF2496 PF10689.9 CTQ26796.1 - 1.1e-24 85.9 0.7 1.3e-24 85.7 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2496) MbeD_MobD PF04899.12 CTQ26796.1 - 0.11 12.7 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 MbeD/MobD like PriC PF07445.12 CTQ26797.1 - 3.4e-46 157.3 16.7 3.9e-46 157.1 16.7 1.0 1 0 0 1 1 1 1 Primosomal replication protein priC Phosphoesterase PF04185.14 CTQ26797.1 - 0.0045 16.2 0.0 0.0056 15.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoesterase family Sas10_Utp3 PF04000.15 CTQ26797.1 - 0.1 13.2 1.0 0.79 10.4 0.3 2.4 2 2 0 2 2 2 0 Sas10/Utp3/C1D family CCDC-167 PF15188.6 CTQ26797.1 - 0.73 10.2 4.7 3.3 8.1 0.0 3.1 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 167 Casc1_N PF15927.5 CTQ26797.1 - 2.2 7.9 15.4 0.11 12.2 7.7 2.3 1 1 1 2 2 2 0 Cancer susceptibility candidate 1 N-terminus Hpt PF01627.23 CTQ26797.1 - 4.5 7.6 11.2 0.24 11.7 0.9 3.2 3 1 0 3 3 3 0 Hpt domain DUF454 PF04304.13 CTQ26798.1 - 7.6e-42 142.0 14.8 8.6e-42 141.8 14.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF454) VirB3 PF05101.13 CTQ26798.1 - 1.6 9.0 12.3 2.1 8.6 1.1 2.1 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein Pribosyltran PF00156.27 CTQ26799.1 - 2.1e-15 56.6 0.0 2.6e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 CTQ26799.1 - 0.0022 17.5 0.0 0.0028 17.1 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 CTQ26799.1 - 0.11 12.0 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase DNA_pol3_tau_5 PF12170.8 CTQ26800.1 - 1.2e-58 197.1 1.9 3.9e-58 195.5 1.9 1.9 1 0 0 1 1 1 1 DNA polymerase III tau subunit V interacting with alpha DNA_pol3_delta2 PF13177.6 CTQ26800.1 - 3.2e-42 144.1 0.0 5e-42 143.5 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit DNA_pol3_gamma3 PF12169.8 CTQ26800.1 - 1.2e-32 112.8 2.9 3.6e-32 111.2 0.7 2.8 2 1 1 3 3 3 1 DNA polymerase III subunits gamma and tau domain III DNA_pol3_tau_4 PF12168.8 CTQ26800.1 - 3.7e-21 75.4 11.0 3.7e-21 75.4 11.0 2.5 3 0 0 3 3 2 1 DNA polymerase III subunits tau domain IV DnaB-binding AAA PF00004.29 CTQ26800.1 - 3.6e-11 43.6 0.0 8.3e-11 42.4 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 CTQ26800.1 - 3.1e-06 27.0 0.0 0.00018 21.3 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 CTQ26800.1 - 3.6e-05 23.8 0.0 9.1e-05 22.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 CTQ26800.1 - 5.5e-05 23.5 0.5 0.00031 21.0 0.0 2.4 3 0 0 3 3 2 1 AAA domain DNA_pol3_delta PF06144.13 CTQ26800.1 - 0.00088 19.1 0.1 0.0017 18.1 0.1 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit ResIII PF04851.15 CTQ26800.1 - 0.0012 18.9 0.1 0.19 11.7 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_18 PF13238.6 CTQ26800.1 - 0.0021 18.6 0.0 0.0051 17.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ26800.1 - 0.0029 18.0 0.3 0.0029 18.0 0.3 3.9 2 2 1 3 3 2 1 AAA ATPase domain AAA_30 PF13604.6 CTQ26800.1 - 0.0065 16.2 0.0 0.028 14.1 0.0 1.9 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 CTQ26800.1 - 0.0067 15.7 0.1 0.72 9.0 0.0 2.3 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_14 PF13173.6 CTQ26800.1 - 0.013 15.5 0.0 0.034 14.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 CTQ26800.1 - 0.034 13.7 0.0 1.6 8.2 0.0 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_assoc_2 PF16193.5 CTQ26800.1 - 0.092 13.1 2.2 0.14 12.5 0.2 2.4 2 0 0 2 2 2 0 AAA C-terminal domain PIF1 PF05970.14 CTQ26800.1 - 0.094 11.9 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase AAA_24 PF13479.6 CTQ26800.1 - 0.1 12.3 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 CTQ26800.1 - 0.11 12.5 0.1 0.29 11.1 0.1 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE YbaB_DNA_bd PF02575.16 CTQ26801.1 - 4.4e-35 119.8 9.6 5e-35 119.6 9.6 1.0 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family CARM1 PF11531.8 CTQ26801.1 - 0.025 14.8 0.0 0.035 14.3 0.0 1.2 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal DUF3947 PF13135.6 CTQ26801.1 - 0.036 14.3 0.7 0.053 13.7 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3947) IIGP PF05049.13 CTQ26801.1 - 0.043 12.9 0.3 0.061 12.4 0.3 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) NDUF_B5 PF09781.9 CTQ26801.1 - 0.1 12.2 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit PspB PF06667.12 CTQ26801.1 - 0.17 12.0 1.6 10 6.3 0.2 2.3 2 0 0 2 2 2 0 Phage shock protein B CENP-Q PF13094.6 CTQ26801.1 - 0.37 11.0 5.6 8.6 6.5 1.9 2.1 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit bZIP_2 PF07716.15 CTQ26801.1 - 8.1 6.6 8.7 4.5 7.4 3.2 2.2 2 0 0 2 2 2 0 Basic region leucine zipper Toprim_4 PF13662.6 CTQ26802.1 - 1.1e-24 86.7 0.0 1.7e-24 86.1 0.0 1.3 1 0 0 1 1 1 1 Toprim domain RecR PF02132.15 CTQ26802.1 - 1.1e-15 56.9 1.2 2.3e-15 55.9 1.2 1.6 1 0 0 1 1 1 1 RecR protein Toprim PF01751.22 CTQ26802.1 - 2.6e-11 43.6 0.0 4.5e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 Toprim domain FYVE_2 PF02318.16 CTQ26802.1 - 0.047 13.9 0.4 0.23 11.7 0.3 1.9 2 0 0 2 2 2 0 FYVE-type zinc finger HHH PF00633.23 CTQ26802.1 - 0.049 13.5 0.4 0.31 11.0 0.0 2.5 3 0 0 3 3 3 0 Helix-hairpin-helix motif Toprim_2 PF13155.6 CTQ26802.1 - 0.053 13.9 0.0 0.27 11.7 0.0 1.9 2 0 0 2 2 2 0 Toprim-like HHH_5 PF14520.6 CTQ26802.1 - 0.14 12.8 0.0 0.67 10.6 0.0 2.1 2 0 0 2 2 2 0 Helix-hairpin-helix domain HSP90 PF00183.18 CTQ26803.1 - 5.4e-131 438.0 5.7 5.6e-129 431.4 4.9 2.0 1 1 1 2 2 2 2 Hsp90 protein HATPase_c PF02518.26 CTQ26803.1 - 4.1e-14 53.0 0.1 7.7e-14 52.2 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 CTQ26803.1 - 1.3e-13 51.0 0.2 4.3e-13 49.3 0.1 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apolipoprotein PF01442.18 CTQ26803.1 - 0.012 15.5 1.1 0.012 15.5 1.1 2.1 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain HP0268 PF18618.1 CTQ26803.1 - 0.046 14.2 0.0 0.21 12.0 0.0 2.2 1 0 0 1 1 1 0 HP0268 CinA_KH PF18146.1 CTQ26803.1 - 0.11 12.6 0.0 5.4 7.2 0.0 2.9 2 0 0 2 2 2 0 Damage-inducible protein CinA KH domain PE PF00934.20 CTQ26803.1 - 0.19 12.0 1.4 1 9.7 1.4 2.3 1 1 0 1 1 1 0 PE family PhoU PF01895.19 CTQ26803.1 - 2.1 8.9 8.0 4.1 7.9 0.2 3.6 4 1 0 4 4 4 0 PhoU domain ADK PF00406.22 CTQ26804.1 - 9.1e-61 204.4 0.1 1.1e-60 204.1 0.1 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 CTQ26804.1 - 7.8e-28 97.6 0.2 2.1e-27 96.2 0.1 1.7 2 0 0 2 2 2 1 AAA domain ADK_lid PF05191.14 CTQ26804.1 - 1.5e-16 60.1 0.0 2.5e-16 59.3 0.0 1.4 1 0 0 1 1 1 1 Adenylate kinase, active site lid Hydin_ADK PF17213.3 CTQ26804.1 - 9.2e-06 26.1 0.5 0.072 13.4 0.0 2.5 1 1 1 2 2 2 2 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 CTQ26804.1 - 0.00098 19.3 0.0 0.0067 16.6 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CTQ26804.1 - 0.0038 17.8 0.0 0.0076 16.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 CTQ26804.1 - 0.029 14.6 0.0 0.049 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain Ferrochelatase PF00762.19 CTQ26805.1 - 1.1e-108 363.0 0.0 1.4e-108 362.8 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase CbiX PF01903.17 CTQ26805.1 - 4.7e-05 23.7 0.0 0.006 16.9 0.0 2.4 2 0 0 2 2 2 2 CbiX RICTOR_N PF14664.6 CTQ26805.1 - 0.11 11.5 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, N-term PfkB PF00294.24 CTQ26806.1 - 8.9e-13 48.2 0.0 6.6e-08 32.2 0.0 2.5 2 1 0 2 2 2 2 pfkB family carbohydrate kinase Na_H_Exchanger PF00999.21 CTQ26807.1 - 3e-77 260.0 52.9 4.2e-77 259.5 52.9 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 CTQ26807.1 - 4.2e-24 85.0 0.1 6.9e-24 84.3 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain ApbA PF02558.16 CTQ26807.1 - 0.0043 16.7 0.1 0.008 15.8 0.1 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 CTQ26807.1 - 0.0057 16.8 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase B12-binding_2 PF02607.17 CTQ26807.1 - 0.046 14.2 1.0 0.12 12.8 0.1 2.1 2 0 0 2 2 2 0 B12 binding domain Shikimate_DH PF01488.20 CTQ26807.1 - 0.14 12.2 0.2 0.31 11.1 0.1 1.6 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase MFS_1 PF07690.16 CTQ26808.1 - 5e-44 150.7 74.9 6.2e-32 110.9 41.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 CTQ26808.1 - 0.002 16.5 17.6 0.056 11.7 3.0 2.5 2 1 0 2 2 2 2 Organic Anion Transporter Polypeptide (OATP) family 5_nucleotid_C PF02872.18 CTQ26809.1 - 4.4e-33 114.7 0.2 9.7e-33 113.6 0.2 1.6 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 CTQ26809.1 - 2.9e-17 63.9 0.2 4.6e-17 63.2 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase tRNA_edit PF04073.15 CTQ26810.1 - 7.8e-23 80.9 0.2 9e-23 80.7 0.2 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain TraB PF01963.17 CTQ26811.1 - 1.8e-35 123.1 0.0 2.3e-35 122.8 0.0 1.0 1 0 0 1 1 1 1 TraB family Hydrolase PF00702.26 CTQ26813.1 - 6.6e-51 173.6 4.0 6.6e-51 173.6 4.0 1.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 CTQ26813.1 - 4.5e-47 159.9 0.8 4.5e-47 159.9 0.8 2.7 3 0 0 3 3 3 1 E1-E2 ATPase HMA PF00403.26 CTQ26813.1 - 4.1e-28 97.6 0.4 1.7e-15 57.2 0.0 2.6 2 0 0 2 2 2 2 Heavy-metal-associated domain Hydrolase_3 PF08282.12 CTQ26813.1 - 1.7e-09 37.8 0.9 3e-06 27.2 0.8 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ26813.1 - 4.3e-07 30.5 0.6 3.9e-06 27.4 0.3 2.7 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CTQ26813.1 - 0.041 14.0 0.0 0.19 11.8 0.0 1.9 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase T2SSF PF00482.23 CTQ26813.1 - 0.13 12.2 5.3 3.3 7.7 0.2 3.9 4 0 0 4 4 4 0 Type II secretion system (T2SS), protein F tRNA-synt_2_TM PF16995.5 CTQ26813.1 - 0.91 9.2 12.4 0.013 15.2 4.7 1.8 2 0 0 2 2 2 0 Transmembrane region of lysyl-tRNA synthetase CstA_5TM PF13722.6 CTQ26813.1 - 1.8 9.0 17.5 0.071 13.5 0.6 3.6 3 1 0 3 3 3 0 5TM C-terminal transporter carbon starvation CstA MerR_1 PF13411.6 CTQ26814.1 - 5e-19 68.2 0.2 1e-18 67.1 0.0 1.6 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR-DNA-bind PF09278.11 CTQ26814.1 - 1.9e-16 60.4 2.3 3.7e-16 59.4 1.9 1.6 2 0 0 2 2 2 1 MerR, DNA binding MerR PF00376.23 CTQ26814.1 - 1.9e-16 59.5 0.1 4e-16 58.5 0.1 1.6 1 0 0 1 1 1 1 MerR family regulatory protein DUF1836 PF08876.11 CTQ26814.1 - 0.009 16.0 0.0 0.013 15.5 0.0 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF1836) Tup_N PF08581.10 CTQ26814.1 - 0.078 13.3 0.4 1.1 9.6 0.0 2.1 2 0 0 2 2 2 0 Tup N-terminal HTH_Mga PF08280.11 CTQ26814.1 - 0.093 12.8 0.0 0.57 10.3 0.0 2.2 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain NfeD PF01957.18 CTQ26815.1 - 1.8e-19 69.9 0.2 2.9e-19 69.2 0.2 1.3 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding Phage_holin_3_6 PF07332.11 CTQ26815.1 - 0.016 15.2 4.3 0.024 14.7 4.3 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III FixQ PF05545.11 CTQ26815.1 - 0.094 12.7 2.3 0.36 10.8 0.0 2.2 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ Peptidase_U4 PF03419.13 CTQ26815.1 - 0.14 11.4 0.2 0.16 11.2 0.2 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA RseC_MucC PF04246.12 CTQ26815.1 - 0.28 11.1 2.0 0.4 10.6 1.1 1.8 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Band_7 PF01145.25 CTQ26816.1 - 1.1e-33 116.7 1.3 1.1e-33 116.7 1.3 2.1 1 1 1 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 CTQ26816.1 - 5.8e-07 29.5 1.7 1.2e-06 28.5 1.7 1.5 1 0 0 1 1 1 1 C-terminal region of band_7 Band_7_1 PF13421.6 CTQ26816.1 - 0.069 12.8 0.2 0.14 11.8 0.2 1.5 1 0 0 1 1 1 0 SPFH domain-Band 7 family DUF1997 PF09366.10 CTQ26816.1 - 0.1 12.7 0.0 0.62 10.2 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1997) Flot PF15975.5 CTQ26816.1 - 1.8 8.7 14.0 0.27 11.5 6.2 2.4 1 1 0 2 2 2 0 Flotillin ABC_tran PF00005.27 CTQ26817.1 - 3.4e-31 108.6 0.0 5.3e-31 108.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 CTQ26817.1 - 1.4e-11 44.3 0.3 1.8e-07 30.8 0.1 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ26817.1 - 7.6e-07 28.8 0.0 1.9e-06 27.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 CTQ26817.1 - 8.7e-06 25.8 0.3 0.00011 22.2 0.1 2.0 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_16 PF13191.6 CTQ26817.1 - 1.6e-05 25.4 0.0 2.3e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 CTQ26817.1 - 1.7e-05 24.8 1.1 0.0026 17.6 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 CTQ26817.1 - 2.8e-05 24.6 0.6 0.00037 20.9 0.6 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CTQ26817.1 - 6.9e-05 23.1 0.1 0.00025 21.3 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 CTQ26817.1 - 0.0002 21.9 0.6 0.00052 20.6 0.6 1.7 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 CTQ26817.1 - 0.00087 19.3 0.0 0.0016 18.4 0.0 1.5 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 CTQ26817.1 - 0.0011 19.0 0.0 0.015 15.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 CTQ26817.1 - 0.0012 18.5 0.0 0.0093 15.6 0.0 2.0 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 CTQ26817.1 - 0.0013 18.7 0.6 0.015 15.3 0.6 2.2 1 1 0 1 1 1 1 NACHT domain Adeno_IVa2 PF02456.15 CTQ26817.1 - 0.0016 17.3 0.0 0.0024 16.7 0.0 1.2 1 0 0 1 1 1 1 Adenovirus IVa2 protein NTPase_1 PF03266.15 CTQ26817.1 - 0.0018 18.2 1.0 0.064 13.2 0.1 2.1 2 0 0 2 2 2 1 NTPase RsgA_GTPase PF03193.16 CTQ26817.1 - 0.0023 17.8 0.0 0.0048 16.8 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_18 PF13238.6 CTQ26817.1 - 0.0027 18.2 0.0 0.0061 17.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 CTQ26817.1 - 0.0056 16.7 0.1 0.11 12.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 CTQ26817.1 - 0.0078 15.6 0.0 0.015 14.7 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 CTQ26817.1 - 0.011 15.5 0.0 0.029 14.1 0.0 1.7 2 1 0 2 2 1 0 AAA domain AAA_11 PF13086.6 CTQ26817.1 - 0.011 15.5 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 CTQ26817.1 - 0.011 16.1 0.0 0.043 14.2 0.0 1.9 2 0 0 2 2 2 0 RNA helicase T2SSE PF00437.20 CTQ26817.1 - 0.014 14.5 0.0 0.022 13.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein SbcCD_C PF13558.6 CTQ26817.1 - 0.023 14.9 0.1 1.9 8.8 0.1 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 CTQ26817.1 - 0.027 14.2 0.0 0.077 12.7 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 CTQ26817.1 - 0.034 13.7 0.1 0.079 12.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.6 CTQ26817.1 - 0.05 14.0 0.8 5.5 7.4 0.1 2.2 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 CTQ26817.1 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 CTQ26817.1 - 0.087 12.2 0.0 5.5 6.4 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein Cytidylate_kin PF02224.18 CTQ26817.1 - 0.12 12.1 0.2 0.28 10.9 0.1 1.6 1 1 0 1 1 1 0 Cytidylate kinase Viral_helicase1 PF01443.18 CTQ26817.1 - 0.15 11.8 0.0 0.35 10.6 0.0 1.7 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase RuvB_N PF05496.12 CTQ26817.1 - 0.16 11.7 0.0 0.38 10.5 0.0 1.6 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain UPF0014 PF03649.13 CTQ26818.1 - 1.6e-82 276.5 18.0 1.9e-82 276.3 18.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) Ac76 PF05814.11 CTQ26818.1 - 0.11 12.6 0.6 0.11 12.6 0.6 2.3 3 0 0 3 3 3 0 Orf76 (Ac76) EI24 PF07264.11 CTQ26818.1 - 2.3 8.4 10.4 0.72 10.1 6.1 1.9 2 0 0 2 2 2 0 Etoposide-induced protein 2.4 (EI24) TPR_20 PF14561.6 CTQ26819.1 - 7.3e-29 99.9 5.6 7.3e-29 99.9 5.6 3.0 2 1 1 3 3 3 1 Tetratricopeptide repeat Thioredoxin PF00085.20 CTQ26819.1 - 1e-20 73.6 0.0 2.1e-20 72.6 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin TPR_19 PF14559.6 CTQ26819.1 - 7.3e-17 61.7 2.2 7.3e-17 61.7 2.2 3.8 4 0 0 4 4 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 CTQ26819.1 - 4.6e-08 33.2 2.8 1.9e-06 28.0 0.5 2.5 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TraF PF13728.6 CTQ26819.1 - 7.4e-08 32.5 0.1 7.4e-08 32.5 0.1 1.8 2 0 0 2 2 2 1 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 CTQ26819.1 - 2.7e-05 24.4 0.0 0.0011 19.2 0.0 2.5 1 1 1 2 2 2 1 Thioredoxin-like OST3_OST6 PF04756.13 CTQ26819.1 - 0.00015 21.3 0.0 0.0002 20.8 0.0 1.2 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 CTQ26819.1 - 0.00027 21.4 0.0 0.00075 19.9 0.0 1.8 2 0 0 2 2 1 1 Thioredoxin-like domain Thioredoxin_6 PF13848.6 CTQ26819.1 - 0.0023 17.9 0.0 0.0035 17.3 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain BTAD PF03704.17 CTQ26819.1 - 0.0025 18.3 8.6 0.05 14.0 1.4 2.6 2 0 0 2 2 2 2 Bacterial transcriptional activator domain SRP_TPR_like PF17004.5 CTQ26819.1 - 0.0078 16.2 0.2 0.021 14.8 0.2 1.7 1 1 0 1 1 1 1 Putative TPR-like repeat TetR_C_31 PF17940.1 CTQ26819.1 - 0.0085 16.3 3.1 0.24 11.6 0.7 3.2 2 2 1 3 3 3 1 Tetracyclin repressor-like, C-terminal domain HyaE PF07449.11 CTQ26819.1 - 0.013 15.4 0.0 0.031 14.2 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Thioredoxin_3 PF13192.6 CTQ26819.1 - 0.046 13.8 0.0 0.12 12.4 0.0 1.8 1 0 0 1 1 1 0 Thioredoxin domain TPR_12 PF13424.6 CTQ26819.1 - 0.077 13.3 10.4 2.5 8.5 1.4 3.8 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 CTQ26819.1 - 0.085 13.3 0.3 2.4 8.7 0.1 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ26819.1 - 0.12 13.2 19.0 12 7.0 2.1 6.1 2 1 4 6 6 6 0 Tetratricopeptide repeat ChAPs PF09295.10 CTQ26819.1 - 0.2 10.6 3.0 0.49 9.3 2.9 1.5 1 1 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) TPR_5 PF12688.7 CTQ26819.1 - 0.25 11.6 8.8 0.2 11.9 0.9 2.8 1 1 1 2 2 2 0 Tetratrico peptide repeat TPR_2 PF07719.17 CTQ26819.1 - 0.42 10.8 5.4 5.2 7.4 0.6 4.0 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 CTQ26819.1 - 2.6 8.7 11.7 6.6 7.5 0.8 4.5 4 1 0 4 4 4 0 Tetratricopeptide repeat TPR_1 PF00515.28 CTQ26819.1 - 3.9 7.5 5.4 12 5.9 0.4 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 CTQ26819.1 - 5.4 7.0 9.1 17 5.4 0.1 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat adh_short PF00106.25 CTQ26820.1 - 1.3e-42 145.4 0.0 1.6e-42 145.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ26820.1 - 3.3e-30 105.4 0.0 4.2e-30 105.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ26820.1 - 1.4e-13 51.2 0.0 1.9e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 CTQ26820.1 - 3.7e-06 26.5 0.0 2.8e-05 23.6 0.0 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) NAD_binding_10 PF13460.6 CTQ26820.1 - 3.9e-06 26.9 0.0 9.8e-06 25.6 0.0 1.6 1 1 0 1 1 1 1 NAD(P)H-binding Eno-Rase_NADH_b PF12242.8 CTQ26820.1 - 0.0027 17.4 0.0 0.0066 16.2 0.0 1.6 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DNA_pol_lambd_f PF10391.9 CTQ26820.1 - 0.15 11.9 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda Epimerase PF01370.21 CTQ26820.1 - 0.18 11.3 0.0 0.8 9.1 0.0 1.9 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family Lipase_GDSL_2 PF13472.6 CTQ26821.1 - 1.2e-25 91.0 0.0 1.5e-25 90.6 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 CTQ26821.1 - 1.4e-13 51.3 0.0 1.6e-13 51.1 0.0 1.0 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase OSK PF17182.4 CTQ26821.1 - 0.041 13.1 0.0 0.057 12.7 0.0 1.1 1 0 0 1 1 1 0 OSK domain ABC_tran PF00005.27 CTQ26822.1 - 1e-29 103.8 0.0 1.4e-29 103.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26822.1 - 5.2e-07 29.8 0.1 0.0061 16.4 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ26822.1 - 9.9e-05 22.0 0.2 0.0002 21.0 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 CTQ26822.1 - 0.00012 21.6 0.0 0.0063 16.0 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ26822.1 - 0.00027 20.9 0.3 0.00046 20.1 0.3 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 CTQ26822.1 - 0.0005 20.3 0.2 0.0046 17.2 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ26822.1 - 0.0029 18.0 3.1 0.012 16.0 3.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 CTQ26822.1 - 0.0041 16.9 0.0 0.57 9.8 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain NACHT PF05729.12 CTQ26822.1 - 0.02 14.8 0.1 0.04 13.9 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_30 PF13604.6 CTQ26822.1 - 0.052 13.3 0.0 0.094 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 CTQ26822.1 - 0.081 13.0 0.1 0.2 11.8 0.1 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_25 PF13481.6 CTQ26822.1 - 0.096 12.3 0.3 1.2 8.7 0.2 2.6 2 1 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 CTQ26822.1 - 0.11 12.3 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_24 PF13479.6 CTQ26822.1 - 0.16 11.6 0.1 0.28 10.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain DLIC PF05783.11 CTQ26822.1 - 0.19 10.5 0.1 0.25 10.1 0.1 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) G-alpha PF00503.20 CTQ26822.1 - 0.26 10.4 0.0 0.26 10.4 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit MacB_PCD PF12704.7 CTQ26823.1 - 6.2e-05 23.4 3.9 0.036 14.4 0.0 2.8 3 0 0 3 3 3 2 MacB-like periplasmic core domain FtsX PF02687.21 CTQ26823.1 - 0.0028 18.1 43.2 0.018 15.5 8.7 6.1 5 1 1 6 6 6 2 FtsX-like permease family CDC48_N PF02359.18 CTQ26823.1 - 0.031 14.5 0.0 2.1 8.5 0.0 2.3 2 0 0 2 2 2 0 Cell division protein 48 (CDC48), N-terminal domain Molydop_binding PF01568.21 CTQ26823.1 - 0.079 13.0 0.0 10 6.2 0.0 3.0 2 1 0 3 3 3 0 Molydopterin dinucleotide binding domain Rhodanese PF00581.20 CTQ26825.1 - 3.2e-05 24.4 0.0 0.0059 17.1 0.0 3.1 2 1 0 2 2 2 2 Rhodanese-like domain ATP-grasp PF02222.22 CTQ26826.1 - 1.8e-55 187.1 0.0 2.4e-55 186.7 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 CTQ26826.1 - 6.7e-17 60.9 0.0 1.3e-16 60.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain AIRC PF00731.20 CTQ26827.1 - 2.4e-63 212.1 1.1 2.7e-63 212.0 1.1 1.0 1 0 0 1 1 1 1 AIR carboxylase RraB PF06877.11 CTQ26827.1 - 0.036 14.8 0.0 0.061 14.1 0.0 1.3 1 0 0 1 1 1 0 Regulator of ribonuclease activity B DUF2334 PF10096.9 CTQ26827.1 - 0.05 13.3 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) MFMR PF07777.11 CTQ26827.1 - 0.055 14.0 0.4 9.3 6.8 0.1 2.2 1 1 1 2 2 2 0 G-box binding protein MFMR DUF805 PF05656.14 CTQ26828.1 - 0.16 12.4 2.3 0.17 12.3 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF805) VirB3 PF05101.13 CTQ26828.1 - 3 8.2 8.6 1 9.7 5.4 1.8 1 1 1 2 2 2 0 Type IV secretory pathway, VirB3-like protein Saf_2TM PF18303.1 CTQ26828.1 - 7.2 6.2 7.5 1.4 8.5 0.0 2.2 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain Metallophos_2 PF12850.7 CTQ26829.1 - 4.6e-10 39.9 0.9 1.9e-09 37.9 0.9 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 CTQ26829.1 - 1.4e-09 38.8 0.2 3e-09 37.7 0.2 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Pro_isomerase PF00160.21 CTQ26830.1 - 1.1e-48 165.4 1.4 1.3e-48 165.3 1.4 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD tRNA-synt_1e PF01406.19 CTQ26831.1 - 4.2e-145 482.7 0.1 5.6e-145 482.3 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DALR_2 PF09190.11 CTQ26831.1 - 2.8e-26 91.8 5.7 3.8e-26 91.4 2.1 2.6 2 0 0 2 2 2 1 DALR domain tRNA-synt_1g PF09334.11 CTQ26831.1 - 4.3e-15 55.3 1.8 7.6e-07 28.2 0.2 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 CTQ26831.1 - 3.8e-08 32.6 0.1 1.9e-05 23.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 CTQ26831.1 - 3.7e-06 25.5 0.1 1.5e-05 23.5 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Mut7-C PF01927.16 CTQ26831.1 - 0.023 14.8 0.0 0.049 13.7 0.0 1.4 1 0 0 1 1 1 0 Mut7-C RNAse domain DUF5327 PF17261.2 CTQ26831.1 - 0.12 13.1 0.1 0.31 11.8 0.1 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5327) S4_2 PF13275.6 CTQ26832.1 - 7e-24 83.4 0.0 7.3e-24 83.4 0.0 1.0 1 0 0 1 1 1 1 S4 domain THF_DHG_CYH_C PF02882.19 CTQ26833.1 - 1.6e-68 229.1 0.1 2.6e-68 228.4 0.1 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 CTQ26833.1 - 1.2e-40 138.4 0.1 2e-40 137.7 0.1 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UDPG_MGDP_dh_N PF03721.14 CTQ26833.1 - 0.091 12.3 0.0 0.26 10.9 0.0 1.8 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Phage_integrase PF00589.22 CTQ26835.1 - 1.2e-29 103.4 0.0 2.1e-29 102.5 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Arm-DNA-bind_3 PF13356.6 CTQ26835.1 - 1.2e-19 70.4 0.8 2.5e-19 69.4 0.8 1.5 1 0 0 1 1 1 1 Arm DNA-binding domain Phage_int_SAM_3 PF14659.6 CTQ26835.1 - 0.001 19.3 0.0 0.0019 18.4 0.0 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain DUF1655 PF07868.11 CTQ26836.1 - 0.048 13.7 0.1 0.07 13.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1655) DUF1640 PF07798.11 CTQ26837.1 - 0.052 13.6 0.1 4 7.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1640) Phage_AlpA PF05930.12 CTQ26838.1 - 1.6e-16 59.8 0.3 1.9e-16 59.6 0.3 1.1 1 0 0 1 1 1 1 Prophage CP4-57 regulatory protein (AlpA) HTH_17 PF12728.7 CTQ26838.1 - 7.2e-09 35.7 0.1 8.2e-09 35.5 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 CTQ26838.1 - 0.03 14.6 0.0 0.034 14.5 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain RNA_pol_Rpb4 PF03874.16 CTQ26839.1 - 0.13 12.6 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb4 AntA PF08346.12 CTQ26840.1 - 5.4e-25 87.7 0.0 1.9e-24 86.0 0.0 2.0 2 0 0 2 2 2 1 AntA/AntB antirepressor Serpulina_VSP PF05540.11 CTQ26840.1 - 0.12 11.3 0.0 1.1 8.2 0.0 2.0 1 1 0 2 2 2 0 Serpulina hyodysenteriae variable surface protein DUF4222 PF13973.6 CTQ26841.1 - 9.9e-24 82.7 0.3 1.1e-23 82.6 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4222) Phage_ASH PF10554.9 CTQ26842.1 - 1.3e-31 109.1 0.4 3.7e-31 107.6 0.1 1.9 2 0 0 2 2 2 1 Ash protein family HD_4 PF13328.6 CTQ26843.1 - 0.021 14.6 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 HD domain CAMP_factor PF07373.11 CTQ26845.1 - 0.003 17.2 0.0 0.0032 17.1 0.0 1.1 1 0 0 1 1 1 1 CAMP factor (Cfa) Death PF00531.22 CTQ26845.1 - 0.03 14.5 0.3 0.037 14.2 0.3 1.2 1 0 0 1 1 1 0 Death domain DUF927 PF06048.11 CTQ26846.1 - 2.1e-56 191.6 0.0 3.3e-56 191.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF927) SSB PF00436.25 CTQ26847.1 - 3.4e-15 56.0 0.0 5.6e-15 55.3 0.0 1.3 1 1 0 1 1 1 1 Single-strand binding protein family P22_CoatProtein PF11651.8 CTQ26847.1 - 0.043 12.4 0.1 0.05 12.2 0.1 1.2 1 0 0 1 1 1 0 P22 coat protein - gene protein 5 RecJ_OB PF17768.1 CTQ26847.1 - 0.047 13.9 0.0 0.073 13.3 0.0 1.3 1 0 0 1 1 1 0 RecJ OB domain HTH_38 PF13936.6 CTQ26848.1 - 1.4e-06 27.9 0.0 3.1e-06 26.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 CTQ26848.1 - 0.0003 20.8 0.0 0.00095 19.3 0.0 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ26848.1 - 0.0028 17.4 0.0 0.031 14.1 0.0 2.6 3 0 0 3 3 3 1 Homeodomain-like domain Bro-N PF02498.17 CTQ26849.1 - 1.2e-25 90.0 0.1 2.5e-25 89.0 0.1 1.5 1 0 0 1 1 1 1 BRO family, N-terminal domain Dak2 PF02734.17 CTQ26849.1 - 0.06 13.2 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 DAK2 domain DUF2680 PF10925.8 CTQ26851.1 - 0.0024 17.8 7.5 0.022 14.7 0.3 3.4 4 0 0 4 4 4 2 Protein of unknown function (DUF2680) Med10 PF09748.9 CTQ26851.1 - 0.038 14.0 0.1 0.4 10.7 0.1 2.4 2 0 0 2 2 2 0 Transcription factor subunit Med10 of Mediator complex Csm1_N PF18504.1 CTQ26851.1 - 0.047 14.0 3.2 2.2 8.7 1.5 2.8 2 0 0 2 2 2 0 Csm1 N-terminal domain DivIC PF04977.15 CTQ26851.1 - 0.11 12.3 3.4 3 7.7 0.1 3.3 4 0 0 4 4 4 0 Septum formation initiator Seryl_tRNA_N PF02403.22 CTQ26851.1 - 0.12 12.6 1.5 10 6.4 0.3 2.7 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain LPAM_2 PF13627.6 CTQ26851.1 - 0.27 11.1 2.7 0.53 10.2 2.7 1.5 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site CENP-H PF05837.12 CTQ26851.1 - 0.39 11.1 4.1 9.1 6.7 0.4 3.1 3 0 0 3 3 3 0 Centromere protein H (CENP-H) DUF1090 PF06476.12 CTQ26851.1 - 0.49 10.5 0.1 0.49 10.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1090) Bap31_Bap29_C PF18035.1 CTQ26851.1 - 1.2 9.2 4.6 1.6 8.8 0.8 2.5 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain PRKG1_interact PF15898.5 CTQ26851.1 - 1.3 10.0 4.9 2.5 9.0 0.3 2.5 2 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain TMP_2 PF06791.13 CTQ26854.1 - 4.1e-08 33.2 15.6 4.1e-08 33.2 15.6 6.6 5 3 1 7 7 7 2 Prophage tail length tape measure protein DUF4611 PF15387.6 CTQ26854.1 - 4.4 7.6 6.6 16 5.8 0.4 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4611) DNA_processg_A PF02481.15 CTQ26856.1 - 1.2e-61 207.7 0.0 1.5e-61 207.3 0.0 1.1 1 0 0 1 1 1 1 DNA recombination-mediator protein A LDcluster4 PF18306.1 CTQ26856.1 - 4.2e-06 26.4 0.7 1.4e-05 24.8 0.7 1.7 1 1 0 1 1 1 1 SLOG cluster4 family YpsA PF06908.11 CTQ26856.1 - 0.17 11.9 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 YspA SLOG family Pribosyltran PF00156.27 CTQ26857.1 - 0.00056 19.4 0.0 0.00086 18.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain FANC_SAP PF18081.1 CTQ26858.1 - 0.0066 16.6 0.1 0.018 15.2 0.0 1.7 1 1 0 1 1 1 1 Fanconi anemia-associated nuclease SAP domain DUF3800 PF12686.7 CTQ26860.1 - 1.5e-11 45.0 0.7 2.5e-11 44.2 0.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3800) Transthyretin PF00576.21 CTQ26862.1 - 4.3e-37 127.2 0.0 4.9e-37 127.0 0.0 1.0 1 0 0 1 1 1 1 HIUase/Transthyretin family bMG3 PF11974.8 CTQ26862.1 - 0.00018 21.5 0.0 0.00022 21.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial alpha-2-macroglobulin MG3 domain CarboxypepD_reg PF13620.6 CTQ26862.1 - 0.0067 16.7 0.0 0.019 15.2 0.0 1.7 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain SdrD_B PF17210.3 CTQ26862.1 - 0.039 14.2 0.1 0.06 13.6 0.1 1.3 1 0 0 1 1 1 0 SdrD B-like domain Citrate_synt PF00285.21 CTQ26864.1 - 1.2e-107 360.2 0.6 1.4e-107 359.9 0.6 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain GHMP_kinases_N PF00288.26 CTQ26864.1 - 0.66 10.3 3.2 16 5.8 0.2 2.5 2 0 0 2 2 2 0 GHMP kinases N terminal domain Acetyltransf_9 PF13527.7 CTQ26865.1 - 7.4e-13 48.7 0.0 1.4e-12 47.8 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ26865.1 - 8.2e-09 35.5 0.0 1.7e-08 34.4 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ26865.1 - 7e-08 32.7 0.0 1.3e-07 31.8 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ26865.1 - 2.1e-07 31.2 0.0 4.4e-07 30.2 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ26865.1 - 4.8e-06 26.5 0.0 8.9e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein GNAT_acetyltran PF12746.7 CTQ26865.1 - 0.003 17.2 0.0 0.0042 16.7 0.0 1.2 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_CG PF14542.6 CTQ26865.1 - 0.099 12.8 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Lip_A_acyltrans PF03279.13 CTQ26866.1 - 4.8e-105 351.0 0.0 5.4e-105 350.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase RcbX PF02341.15 CTQ26866.1 - 0.18 12.1 0.2 1.1 9.5 0.1 2.1 2 0 0 2 2 2 0 RbcX protein DUF1471 PF07338.13 CTQ26867.1 - 3.5e-20 71.7 0.2 5.1e-20 71.2 0.0 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1471) DUF3087 PF11286.8 CTQ26867.1 - 0.14 11.7 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) CadC_C1 PF18500.1 CTQ26868.1 - 1.7e-79 264.5 2.2 3.1e-79 263.7 2.2 1.4 1 0 0 1 1 1 1 CadC C-terminal domain 1 Trans_reg_C PF00486.28 CTQ26868.1 - 1.1e-18 67.1 0.1 2.2e-18 66.1 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Homez PF11569.8 CTQ26868.1 - 0.015 14.8 0.4 0.037 13.5 0.4 1.7 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez AA_permease_2 PF13520.6 CTQ26869.1 - 1.4e-39 136.2 57.7 2.8e-39 135.1 57.7 1.4 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 CTQ26869.1 - 2.3e-18 66.1 48.1 6.4e-18 64.6 48.2 1.6 1 1 0 1 1 1 1 Amino acid permease Tmemb_18A PF09771.9 CTQ26869.1 - 0.061 13.7 0.9 0.061 13.7 0.9 1.9 2 0 0 2 2 2 0 Transmembrane protein 188 OKR_DC_1 PF01276.20 CTQ26870.1 - 8.3e-197 654.0 0.1 1.2e-196 653.5 0.1 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.15 CTQ26870.1 - 2.4e-46 157.3 1.0 5.8e-46 156.0 0.7 1.9 2 0 0 2 2 2 1 Orn/Lys/Arg decarboxylase, C-terminal domain OKR_DC_1_N PF03709.15 CTQ26870.1 - 2e-28 98.9 0.1 4e-28 97.9 0.1 1.5 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, N-terminal domain Ish1 PF10281.9 CTQ26870.1 - 0.17 12.2 0.1 7.8 6.9 0.0 2.9 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein DUF89 PF01937.19 CTQ26870.1 - 0.19 10.6 0.0 0.32 9.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF89 PTR2 PF00854.21 CTQ26871.1 - 1.6e-83 280.8 14.8 2e-83 280.4 14.8 1.1 1 0 0 1 1 1 1 POT family MFS_1 PF07690.16 CTQ26871.1 - 4e-18 65.5 55.2 9.8e-18 64.2 52.4 2.6 1 1 0 1 1 1 1 Major Facilitator Superfamily CPSase_sm_chain PF00988.22 CTQ26871.1 - 0.078 12.8 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase small chain, CPSase domain DUF4271 PF14093.6 CTQ26871.1 - 0.13 12.1 0.0 0.13 12.1 0.0 3.5 2 2 1 3 3 3 0 Domain of unknown function (DUF4271) DUF872 PF05915.12 CTQ26871.1 - 4.2 7.6 5.6 28 4.9 0.5 3.5 3 0 0 3 3 3 0 Eukaryotic protein of unknown function (DUF872) tRNA-synt_2 PF00152.20 CTQ26873.1 - 4.8e-84 282.1 0.5 6.5e-84 281.7 0.5 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 CTQ26873.1 - 1.4e-15 57.0 0.0 2.5e-15 56.2 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 CTQ26873.1 - 5.4e-05 22.8 2.0 0.1 12.1 0.1 3.0 3 0 0 3 3 3 2 tRNA synthetases class II core domain (F) DPPIV_rep PF18811.1 CTQ26874.1 - 0.075 13.0 0.9 0.38 10.8 0.1 2.3 2 0 0 2 2 2 0 Dipeptidyl peptidase IV (DPP IV) low complexity region Carot_N PF09150.10 CTQ26874.1 - 0.14 12.0 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Orange carotenoid protein, N-terminal AP_endonuc_2 PF01261.24 CTQ26875.1 - 6e-22 78.1 0.1 7.7e-22 77.8 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel GFO_IDH_MocA PF01408.22 CTQ26876.1 - 2.6e-29 102.5 0.1 4.4e-29 101.8 0.1 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 CTQ26876.1 - 6e-09 35.9 0.0 1.2e-08 35.0 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 CTQ26876.1 - 1.4e-07 32.2 0.1 2.4e-07 31.4 0.1 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 CTQ26876.1 - 0.11 12.7 0.5 0.89 9.8 0.5 2.2 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain PTPS_related PF10131.9 CTQ26876.1 - 0.14 10.4 0.0 0.19 10.0 0.0 1.1 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein GFO_IDH_MocA PF01408.22 CTQ26877.1 - 1.9e-27 96.4 0.0 2.8e-27 95.9 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 CTQ26877.1 - 0.00016 22.3 0.0 0.00023 21.8 0.0 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 CTQ26877.1 - 0.0017 18.5 0.0 0.0026 17.8 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 CTQ26877.1 - 0.012 16.2 0.0 0.021 15.4 0.0 1.4 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent G6PD_N PF00479.22 CTQ26877.1 - 0.12 13.0 0.0 0.2 12.3 0.0 1.4 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 CTQ26877.1 - 0.16 11.3 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 CTQ26879.1 - 1.2e-21 77.8 0.3 2e-21 77.0 0.3 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 CTQ26879.1 - 1.2e-07 31.7 0.0 2.3e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain F420_oxidored PF03807.17 CTQ26879.1 - 1.7e-05 25.3 1.1 3.9e-05 24.2 1.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 CTQ26879.1 - 3.1e-05 24.2 0.2 6.7e-05 23.2 0.2 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Semialdhyde_dh PF01118.24 CTQ26879.1 - 0.0025 18.3 0.1 0.0045 17.4 0.1 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 CTQ26879.1 - 0.0028 17.7 0.1 0.0059 16.7 0.1 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase DAO_C PF16901.5 CTQ26879.1 - 0.025 14.4 0.1 0.05 13.5 0.1 1.5 1 0 0 1 1 1 0 C-terminal domain of alpha-glycerophosphate oxidase ApbA PF02558.16 CTQ26879.1 - 0.048 13.3 0.2 0.13 11.9 0.1 1.8 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Peripla_BP_4 PF13407.6 CTQ26880.1 - 5e-34 118.0 0.0 9.5e-34 117.1 0.0 1.4 2 0 0 2 2 2 1 Periplasmic binding protein domain LacI PF00356.21 CTQ26880.1 - 4.6e-09 35.9 0.1 1.8e-08 34.1 0.1 2.0 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_29 PF13551.6 CTQ26880.1 - 0.0012 18.9 0.2 15 5.7 0.1 4.2 3 1 1 4 4 4 2 Winged helix-turn helix Peripla_BP_1 PF00532.21 CTQ26880.1 - 0.0013 18.2 0.0 0.0037 16.7 0.0 1.7 1 1 1 2 2 2 1 Periplasmic binding proteins and sugar binding domain of LacI family HTH_23 PF13384.6 CTQ26880.1 - 0.002 17.9 0.3 13 5.7 0.0 4.1 3 1 1 4 4 4 1 Homeodomain-like domain HTH_31 PF13560.6 CTQ26880.1 - 0.0025 18.1 0.2 0.0025 18.1 0.2 3.1 4 1 0 4 4 4 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ26880.1 - 0.023 14.8 0.2 0.12 12.5 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix HTH_38 PF13936.6 CTQ26880.1 - 0.48 10.2 7.1 10 6.0 0.1 4.3 5 0 0 5 5 5 0 Helix-turn-helix domain Peripla_BP_4 PF13407.6 CTQ26881.1 - 3.6e-61 207.0 14.1 4.2e-61 206.8 14.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ26881.1 - 1.3e-15 57.6 2.0 1.7e-15 57.2 2.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ26881.1 - 7e-10 39.5 0.0 5e-09 36.7 0.0 2.0 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_6 PF13458.6 CTQ26881.1 - 6.8e-09 35.8 5.3 2.5e-07 30.7 1.7 2.0 1 1 1 2 2 2 2 Periplasmic binding protein ANF_receptor PF01094.28 CTQ26881.1 - 0.0022 17.1 0.0 0.0029 16.8 0.0 1.2 1 0 0 1 1 1 1 Receptor family ligand binding region Mub_B2 PF17966.1 CTQ26881.1 - 0.027 15.2 0.2 0.064 14.0 0.2 1.6 1 0 0 1 1 1 0 Mub B2-like domain ABC_tran PF00005.27 CTQ26882.1 - 4e-59 199.1 0.0 5.9e-33 114.3 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ26882.1 - 1.8e-09 37.9 0.0 0.0018 18.1 0.0 3.1 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ26882.1 - 5.4e-05 22.8 0.0 0.0023 17.6 0.0 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ26882.1 - 0.00026 20.9 0.0 0.041 13.8 0.0 2.9 3 0 0 3 3 3 1 RsgA GTPase SMC_N PF02463.19 CTQ26882.1 - 0.0016 17.9 2.2 0.89 9.0 0.0 3.7 3 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 CTQ26882.1 - 0.0029 16.5 1.6 1.9 7.2 0.0 3.8 4 0 0 4 4 4 1 Predicted ATPase of the ABC class MukB PF04310.12 CTQ26882.1 - 0.005 16.7 0.1 0.021 14.6 0.0 2.0 3 0 0 3 3 3 1 MukB N-terminal AAA_30 PF13604.6 CTQ26882.1 - 0.0094 15.7 1.9 0.24 11.1 0.4 3.2 3 1 0 3 3 3 1 AAA domain AAA_23 PF13476.6 CTQ26882.1 - 0.012 16.2 0.0 0.027 15.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 CTQ26882.1 - 0.012 15.9 0.8 0.73 10.1 0.1 3.3 3 1 0 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 CTQ26882.1 - 0.034 14.2 0.0 0.68 10.0 0.0 2.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_16 PF13191.6 CTQ26882.1 - 0.042 14.2 0.2 0.23 11.8 0.0 2.3 2 1 1 3 3 3 0 AAA ATPase domain BPD_transp_2 PF02653.16 CTQ26883.1 - 1.6e-45 155.4 40.7 3.1e-45 154.4 40.7 1.5 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component SLATT_fungal PF18142.1 CTQ26884.1 - 0.02 14.9 0.1 0.02 14.9 0.1 2.0 3 0 0 3 3 3 0 SMODS and SLOG-associating 2TM effector domain mCpol PF18182.1 CTQ26884.1 - 0.13 12.6 0.0 1.5 9.2 0.0 2.1 2 0 0 2 2 2 0 minimal CRISPR polymerase domain LacI PF00356.21 CTQ26885.1 - 1e-20 73.2 0.3 3.9e-20 71.4 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family Peripla_BP_3 PF13377.6 CTQ26885.1 - 5.1e-13 49.7 0.0 1.1e-11 45.4 0.0 2.2 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 CTQ26885.1 - 2.1e-11 43.9 0.0 4e-11 43.0 0.0 1.5 1 1 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ26885.1 - 1.3e-08 34.6 0.0 1.7e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family HTH_10 PF04967.12 CTQ26885.1 - 0.014 15.2 0.1 0.03 14.1 0.1 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_31 PF13560.6 CTQ26885.1 - 0.024 15.0 0.7 0.086 13.2 0.7 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_26 PF13443.6 CTQ26885.1 - 0.026 15.0 0.3 0.067 13.6 0.1 1.8 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain TetR_N PF00440.23 CTQ26885.1 - 0.036 13.9 0.3 0.12 12.2 0.3 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_3 PF01381.22 CTQ26885.1 - 0.13 12.3 0.1 0.38 10.8 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix HTH_19 PF12844.7 CTQ26885.1 - 0.17 11.9 0.0 21 5.2 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 CTQ26885.1 - 0.2 11.6 0.1 0.42 10.5 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Glyco_hydro_32N PF00251.20 CTQ26886.1 - 3.2e-97 325.8 0.0 3.9e-97 325.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 N-terminal domain Glyco_hydro_32C PF08244.12 CTQ26886.1 - 2.5e-10 40.6 0.0 3.8e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 C terminal Glyco_hydro_43 PF04616.14 CTQ26886.1 - 9.3e-06 25.1 0.0 3.6e-05 23.2 0.0 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 43 PTS_EIIC PF02378.18 CTQ26887.1 - 2.3e-50 171.5 37.7 2.3e-50 171.5 37.7 1.9 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ26887.1 - 3.2e-13 48.9 0.0 7.4e-13 47.8 0.0 1.6 1 0 0 1 1 1 1 phosphotransferase system, EIIB LamB PF02264.15 CTQ26888.1 - 4.2e-104 349.5 13.5 6.4e-104 348.9 13.5 1.3 1 0 0 1 1 1 1 LamB porin Sugarporin_N PF11471.8 CTQ26888.1 - 6.1e-19 67.7 6.1 6.1e-19 67.7 6.1 2.2 1 1 1 2 2 1 1 Maltoporin periplasmic N-terminal extension XhlA PF10779.9 CTQ26888.1 - 0.00011 22.4 1.1 0.00032 20.9 1.1 1.8 1 0 0 1 1 1 1 Haemolysin XhlA SKA1 PF07160.12 CTQ26888.1 - 0.001 19.0 3.4 0.0016 18.4 3.4 1.2 1 0 0 1 1 1 1 Spindle and kinetochore-associated protein 1 Fmp27_WPPW PF10359.9 CTQ26888.1 - 0.011 14.7 0.4 0.011 14.7 0.4 1.6 2 0 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain CCDC53 PF10152.9 CTQ26888.1 - 0.022 15.2 0.5 0.035 14.5 0.5 1.2 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex ERM PF00769.19 CTQ26888.1 - 0.041 13.7 14.4 0.06 13.2 14.4 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family DUF4200 PF13863.6 CTQ26888.1 - 0.049 14.0 6.1 0.078 13.4 6.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) Tropomyosin PF00261.20 CTQ26888.1 - 0.058 12.8 12.2 0.086 12.2 12.2 1.1 1 0 0 1 1 1 0 Tropomyosin HemX PF04375.14 CTQ26888.1 - 0.11 11.8 13.9 0.18 11.1 13.9 1.2 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Spc7 PF08317.11 CTQ26888.1 - 0.15 10.9 5.2 0.31 9.9 5.2 1.4 1 0 0 1 1 1 0 Spc7 kinetochore protein ABC_tran_CTD PF16326.5 CTQ26888.1 - 0.25 11.6 10.7 0.7 10.2 10.7 1.7 1 1 0 1 1 1 0 ABC transporter C-terminal domain BLOC1_2 PF10046.9 CTQ26888.1 - 0.27 11.5 4.6 0.63 10.4 4.6 1.6 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GAS PF13851.6 CTQ26888.1 - 0.32 10.3 8.3 0.51 9.7 8.3 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding GrpE PF01025.19 CTQ26888.1 - 1 9.0 5.8 1.7 8.2 5.8 1.3 1 0 0 1 1 1 0 GrpE Rotamase PF00639.21 CTQ26888.1 - 1.3 10.1 4.1 2.6 9.1 3.7 1.8 1 1 0 1 1 1 0 PPIC-type PPIASE domain DUF724 PF05266.14 CTQ26888.1 - 1.3 8.8 6.0 2 8.2 6.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF3450 PF11932.8 CTQ26888.1 - 1.5 8.1 14.8 2.8 7.2 14.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) OmpH PF03938.14 CTQ26888.1 - 2 8.8 14.1 3.3 8.0 14.1 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 CTQ26888.1 - 2.1 7.6 10.0 3.4 6.9 10.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) EzrA PF06160.12 CTQ26888.1 - 2.4 6.2 6.3 3.5 5.7 6.3 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA DUF3584 PF12128.8 CTQ26888.1 - 5.8 4.3 15.0 7.7 3.9 15.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) PfkB PF00294.24 CTQ26889.1 - 3.5e-75 253.1 0.0 3.9e-75 253.0 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HTH_46 PF15977.5 CTQ26890.1 - 9.9e-15 54.3 0.2 1.7e-14 53.6 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA binding Rrf2 PF02082.20 CTQ26890.1 - 0.00053 20.3 0.0 0.001 19.4 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator TrmB PF01978.19 CTQ26890.1 - 0.0041 17.0 0.0 0.0076 16.1 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 CTQ26890.1 - 0.026 14.4 0.0 0.084 12.8 0.0 1.8 2 0 0 2 2 2 0 MarR family HTH_5 PF01022.20 CTQ26890.1 - 0.068 13.0 0.0 2 8.4 0.0 2.6 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 CTQ26890.1 - 0.068 13.1 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_7 PF02796.15 CTQ26890.1 - 0.13 12.4 0.2 0.3 11.2 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_IclR PF09339.10 CTQ26890.1 - 0.14 12.0 0.0 0.33 10.8 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_29 PF13551.6 CTQ26890.1 - 0.17 12.0 0.0 0.4 10.7 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix HTH_24 PF13412.6 CTQ26890.1 - 0.19 11.3 0.1 0.4 10.3 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF3302 PF11742.8 CTQ26891.1 - 2.9e-37 126.7 8.9 3.6e-37 126.4 8.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3302) CbiX PF01903.17 CTQ26891.1 - 0.011 16.0 1.0 0.032 14.6 0.2 1.9 2 0 0 2 2 2 0 CbiX TraQ PF09679.10 CTQ26891.1 - 0.049 13.6 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin chaperone (TraQ) DUF4298 PF14131.6 CTQ26891.1 - 0.062 13.3 0.3 0.097 12.6 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Biotin_lipoyl_2 PF13533.6 CTQ26892.1 - 2.3e-11 43.4 0.2 2.3e-11 43.4 0.2 2.8 3 0 0 3 3 3 1 Biotin-lipoyl like HlyD_D23 PF16576.5 CTQ26892.1 - 1.8e-09 37.2 4.2 3.7e-07 29.6 4.2 3.1 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 CTQ26892.1 - 6.8e-08 33.2 2.6 0.0025 18.5 0.2 2.9 3 0 0 3 3 3 2 HlyD family secretion protein HlyD PF00529.20 CTQ26892.1 - 0.0052 16.6 0.0 0.0093 15.8 0.0 1.6 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 CTQ26892.1 - 0.0078 16.0 0.0 0.19 11.6 0.0 2.5 2 0 0 2 2 2 1 Biotin-requiring enzyme DUF4407 PF14362.6 CTQ26892.1 - 0.01 15.3 5.6 0.021 14.2 5.6 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) DUF4715 PF15835.5 CTQ26892.1 - 0.011 15.8 0.1 0.065 13.3 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4715) Taxilin PF09728.9 CTQ26892.1 - 0.017 14.3 0.1 0.021 14.0 0.1 1.1 1 0 0 1 1 1 0 Myosin-like coiled-coil protein DUF3584 PF12128.8 CTQ26892.1 - 0.39 8.2 9.1 0.54 7.7 9.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Lectin_N PF03954.14 CTQ26892.1 - 1 9.1 4.9 14 5.4 0.2 2.3 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain HrpB7 PF09486.10 CTQ26892.1 - 1.7 9.0 16.8 3.3 8.1 16.8 1.4 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) IFT20 PF14931.6 CTQ26892.1 - 2 8.6 5.2 0.64 10.2 0.8 2.0 1 1 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 APG6_N PF17675.1 CTQ26892.1 - 8.6 6.9 9.0 3.5e+02 1.7 9.0 2.2 1 1 0 1 1 1 0 Apg6 coiled-coil region OEP PF02321.18 CTQ26892.1 - 9.2 6.0 18.0 0.68 9.7 2.1 2.2 2 0 0 2 2 2 0 Outer membrane efflux protein ABC_tran PF00005.27 CTQ26893.1 - 1.3e-25 90.5 0.0 1.8e-25 90.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26893.1 - 6.1e-13 49.2 0.1 1.5e-05 25.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26893.1 - 1.8e-09 37.4 0.1 0.0016 17.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ26893.1 - 1.8e-05 24.4 0.0 3.7e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ26893.1 - 0.00016 22.3 0.0 0.00023 21.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_13 PF13166.6 CTQ26893.1 - 0.0005 18.9 0.0 0.21 10.2 0.0 2.0 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 CTQ26893.1 - 0.00052 19.7 0.6 0.0011 18.5 0.1 2.0 2 1 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 CTQ26893.1 - 0.0019 17.1 0.1 0.23 10.2 0.0 2.6 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_33 PF13671.6 CTQ26893.1 - 0.0026 17.9 0.0 0.014 15.6 0.0 2.1 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ26893.1 - 0.02 14.8 0.0 0.038 13.9 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_22 PF13401.6 CTQ26893.1 - 0.028 14.7 0.2 0.057 13.7 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 CTQ26893.1 - 0.034 13.9 0.0 0.065 12.9 0.0 1.4 2 0 0 2 2 2 0 AAA ATPase domain AAA_16 PF13191.6 CTQ26893.1 - 0.049 14.0 0.3 0.078 13.3 0.3 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 CTQ26893.1 - 0.099 12.2 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ26893.1 - 0.22 11.4 0.8 0.46 10.4 0.2 1.8 2 0 0 2 2 2 0 NACHT domain FecCD PF01032.18 CTQ26894.1 - 2e-88 296.4 37.1 2.5e-88 296.1 37.1 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 CTQ26894.1 - 0.00011 21.9 22.6 0.00011 21.9 22.6 1.4 2 0 0 2 2 2 1 ABC 3 transport family FTR1 PF03239.14 CTQ26894.1 - 0.12 11.5 8.5 0.24 10.5 8.5 1.6 1 0 0 1 1 1 0 Iron permease FTR1 family Peripla_BP_2 PF01497.18 CTQ26895.1 - 1e-22 80.9 0.0 1.4e-22 80.4 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Connexin PF00029.19 CTQ26896.1 - 0.5 10.1 2.4 0.69 9.6 2.4 1.4 1 1 0 1 1 1 0 Connexin YtxH PF12732.7 CTQ26896.1 - 1.2 9.7 12.4 3 8.5 2.9 2.3 1 1 1 2 2 2 0 YtxH-like protein ATP-synt_B PF00430.18 CTQ26896.1 - 2.5 8.2 10.3 2.5 8.2 9.8 1.4 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) Smg8_Smg9 PF10220.9 CTQ26896.1 - 2.5 6.3 6.1 2.8 6.2 6.1 1.0 1 0 0 1 1 1 0 Smg8_Smg9 Presenilin PF01080.17 CTQ26896.1 - 3.1 6.5 5.7 3.6 6.3 5.7 1.0 1 0 0 1 1 1 0 Presenilin Vfa1 PF08432.10 CTQ26896.1 - 6 7.2 11.6 7.8 6.8 11.6 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 RcnB PF11776.8 CTQ26898.1 - 2.3e-21 75.6 0.9 4e-21 74.8 0.9 1.4 1 0 0 1 1 1 1 Nickel/cobalt transporter regulator Peptidase_M20 PF01546.28 CTQ26900.1 - 6.4e-34 117.5 0.2 8.5e-34 117.1 0.2 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ26900.1 - 9.7e-10 38.3 0.1 1.7e-09 37.5 0.1 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain SBP_bac_3 PF00497.20 CTQ26901.1 - 5.5e-61 205.9 0.0 6.2e-61 205.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.11 CTQ26901.1 - 0.0017 18.3 0.0 0.0082 16.1 0.0 1.9 1 1 1 2 2 2 1 NMT1/THI5 like Lig_chan-Glu_bd PF10613.9 CTQ26901.1 - 0.01 16.0 0.0 0.057 13.6 0.0 2.1 1 1 1 2 2 2 0 Ligated ion channel L-glutamate- and glycine-binding site Aldo_ket_red PF00248.21 CTQ26903.1 - 4.1e-71 239.6 0.0 4.6e-71 239.4 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family MoaF_C PF17409.2 CTQ26904.1 - 2.1e-46 156.2 0.0 3.1e-46 155.7 0.0 1.2 1 0 0 1 1 1 1 MoaF C-terminal domain MoaF PF10703.9 CTQ26904.1 - 7.9e-17 61.2 0.0 4.3e-16 58.8 0.0 1.9 2 0 0 2 2 2 1 MoaF N-terminal domain adh_short_C2 PF13561.6 CTQ26905.1 - 8.3e-53 179.3 0.3 1.3e-52 178.8 0.3 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ26905.1 - 3.7e-43 147.3 0.0 4.7e-43 146.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ26905.1 - 2.3e-06 27.7 0.6 4.8e-06 26.6 0.6 1.5 1 1 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 CTQ26905.1 - 0.069 12.3 0.0 0.15 11.1 0.0 1.6 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein TrkA_N PF02254.18 CTQ26905.1 - 0.11 12.7 0.1 0.24 11.7 0.1 1.5 1 0 0 1 1 1 0 TrkA-N domain Pyr_redox PF00070.27 CTQ26905.1 - 0.18 12.4 0.7 0.42 11.2 0.7 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sulfatase PF00884.23 CTQ26906.1 - 9.2e-66 222.3 1.7 1.2e-65 222.0 1.7 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 CTQ26906.1 - 1.5e-09 38.0 0.4 3.4e-08 33.5 0.4 2.2 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4994 PF16385.5 CTQ26906.1 - 0.00086 19.2 0.0 0.0028 17.6 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function DUF1359 PF07097.11 CTQ26906.1 - 0.0049 17.1 0.0 0.01 16.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1359) Sulfatase_C PF14707.6 CTQ26906.1 - 0.021 15.6 0.1 0.11 13.3 0.0 2.0 2 0 0 2 2 2 0 C-terminal region of aryl-sulfatase DUF229 PF02995.17 CTQ26906.1 - 0.15 10.6 0.0 9.2 4.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF229) Radical_SAM PF04055.21 CTQ26907.1 - 7.6e-15 55.7 0.0 1.1e-14 55.2 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 CTQ26907.1 - 0.0089 16.2 0.0 0.019 15.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 CTQ26907.1 - 0.01 16.1 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain TssR PF17643.1 CTQ26907.1 - 0.16 9.9 0.0 0.22 9.4 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssR DUF3641 PF12345.8 CTQ26907.1 - 0.36 10.9 1.9 0.97 9.5 1.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3641) GerE PF00196.19 CTQ26908.1 - 4.4e-16 58.2 1.0 8.1e-16 57.3 1.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 CTQ26908.1 - 1.5e-06 27.8 0.0 4.4e-06 26.3 0.0 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 CTQ26908.1 - 0.00017 21.3 0.4 0.009 15.8 0.0 2.6 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4 PF04545.16 CTQ26908.1 - 0.00028 20.3 0.1 0.00079 18.9 0.1 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 CTQ26908.1 - 0.00058 19.4 0.1 0.0013 18.2 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_10 PF04967.12 CTQ26908.1 - 0.0023 17.7 0.3 0.047 13.5 0.1 2.6 3 0 0 3 3 3 1 HTH DNA binding domain HTH_38 PF13936.6 CTQ26908.1 - 0.0031 17.2 0.1 0.0081 15.9 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 CTQ26908.1 - 0.0056 16.7 0.1 0.015 15.4 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_40 PF14493.6 CTQ26908.1 - 0.012 16.0 0.0 0.031 14.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 CTQ26908.1 - 0.038 13.4 0.0 0.12 11.8 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Sigma70_ECF PF07638.11 CTQ26908.1 - 0.07 13.0 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 ECF sigma factor HTH_20 PF12840.7 CTQ26908.1 - 0.077 13.1 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3071 PF11268.8 CTQ26908.1 - 0.13 12.3 0.1 0.19 11.8 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3071) HTH_Tnp_IS1 PF12759.7 CTQ26908.1 - 0.17 11.5 0.1 0.32 10.6 0.1 1.4 1 0 0 1 1 1 0 InsA C-terminal domain MFS_1 PF07690.16 CTQ26909.1 - 7.9e-14 51.3 65.2 2.4e-11 43.2 53.1 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Hist_deacetyl PF00850.19 CTQ26910.1 - 5.4e-73 246.2 0.0 8.4e-73 245.5 0.0 1.3 1 0 0 1 1 1 1 Histone deacetylase domain PSK_trans_fac PF07704.11 CTQ26910.1 - 0.016 16.0 0.3 0.14 13.0 0.0 2.3 3 0 0 3 3 3 0 Rv0623-like transcription factor HigB_toxin PF09907.9 CTQ26911.1 - 3.9e-32 110.3 0.3 4.7e-32 110.0 0.3 1.1 1 0 0 1 1 1 1 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CedA PF10729.9 CTQ26911.1 - 0.066 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Cell division activator CedA HTH_3 PF01381.22 CTQ26912.1 - 1.2e-05 25.3 0.0 2e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 CTQ26912.1 - 0.0007 19.6 0.0 0.0011 19.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DUF3156 PF11354.8 CTQ26913.1 - 1.8e-62 210.0 0.1 2e-62 209.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3156) AA_permease_2 PF13520.6 CTQ26914.1 - 3.7e-35 121.6 42.0 4.6e-35 121.3 42.0 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 CTQ26914.1 - 4.1e-17 62.0 34.9 6.6e-17 61.3 34.9 1.3 1 0 0 1 1 1 1 Amino acid permease DUF1422 PF07226.11 CTQ26914.1 - 0.025 14.6 0.1 0.094 12.7 0.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) YbgT_YccB PF08173.11 CTQ26914.1 - 0.034 14.3 3.6 0.034 14.3 3.6 4.8 6 0 0 6 6 6 0 Membrane bound YbgT-like protein Cupin_3 PF05899.12 CTQ26915.1 - 9.7e-20 70.0 0.6 1.2e-19 69.8 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 CTQ26915.1 - 2.2e-06 27.3 0.3 1.1e-05 25.0 0.3 2.0 1 1 0 1 1 1 1 Cupin domain EutQ PF06249.12 CTQ26915.1 - 0.043 13.6 0.0 0.047 13.4 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ DAO PF01266.24 CTQ26916.1 - 1.3e-40 140.1 0.1 1.5e-40 139.8 0.1 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 CTQ26916.1 - 7e-07 28.7 0.4 1.2e-06 27.9 0.4 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 CTQ26916.1 - 7.7e-06 25.4 2.2 0.0011 18.3 0.8 2.3 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 CTQ26916.1 - 1.1e-05 24.8 1.1 2.4e-05 23.7 0.5 1.7 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 CTQ26916.1 - 8.8e-05 21.8 3.3 0.00021 20.5 2.4 1.9 2 1 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.19 CTQ26916.1 - 0.0001 21.7 0.1 0.00013 21.3 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 CTQ26916.1 - 0.00012 21.6 0.6 0.00015 21.3 0.6 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CTQ26916.1 - 0.0017 18.5 3.1 0.0035 17.6 1.9 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 CTQ26916.1 - 0.0035 17.9 4.1 0.11 13.0 1.6 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ26916.1 - 0.022 13.5 1.2 0.13 10.9 0.6 2.1 2 0 0 2 2 2 0 HI0933-like protein NAD_binding_9 PF13454.6 CTQ26916.1 - 0.069 13.1 0.9 0.36 10.8 0.9 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding GIDA PF01134.22 CTQ26916.1 - 0.073 12.1 1.6 0.1 11.7 1.6 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Trp_halogenase PF04820.14 CTQ26916.1 - 0.11 11.3 1.9 0.18 10.6 1.9 1.3 1 0 0 1 1 1 0 Tryptophan halogenase Lycopene_cycl PF05834.12 CTQ26916.1 - 0.16 11.0 0.3 0.25 10.4 0.3 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Aldedh PF00171.22 CTQ26917.1 - 8.6e-157 522.3 0.0 1.1e-156 522.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 CTQ26917.1 - 0.023 13.8 0.0 0.034 13.2 0.0 1.2 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) SGL PF08450.12 CTQ26919.1 - 1.1e-10 41.6 0.0 4.8e-05 23.1 0.0 3.1 2 1 0 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region PQQ_2 PF13360.6 CTQ26919.1 - 4.1e-06 26.6 0.3 9.4e-05 22.1 0.2 2.7 1 1 0 1 1 1 1 PQQ-like domain PQQ_3 PF13570.6 CTQ26919.1 - 1.4e-05 25.4 0.7 6.2 7.5 0.0 5.5 7 0 0 7 7 7 2 PQQ-like domain PQQ PF01011.21 CTQ26919.1 - 0.00092 19.0 3.2 0.058 13.3 0.1 4.3 4 0 0 4 4 4 1 PQQ enzyme repeat Lactonase PF10282.9 CTQ26919.1 - 0.016 14.5 0.1 0.7 9.1 0.0 2.9 3 2 0 3 3 3 0 Lactonase, 7-bladed beta-propeller Ribosomal_L14 PF00238.19 CTQ26919.1 - 0.072 13.2 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein L14p/L23e TonB_dep_Rec PF00593.24 CTQ26920.1 - 3.1e-32 113.1 34.9 3.9e-32 112.7 32.0 2.2 1 1 0 2 2 2 1 TonB dependent receptor Plug PF07715.15 CTQ26920.1 - 6.3e-13 49.2 2.2 9.6e-13 48.6 1.0 1.9 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain AA_permease PF00324.21 CTQ26921.1 - 2.3e-117 392.5 41.5 2.7e-117 392.3 41.5 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ26921.1 - 1.1e-45 156.3 43.7 1.4e-45 155.9 43.7 1.1 1 0 0 1 1 1 1 Amino acid permease Nuc_H_symport PF03825.16 CTQ26922.1 - 7.2e-97 324.9 33.9 9.1e-97 324.6 33.9 1.0 1 0 0 1 1 1 1 Nucleoside H+ symporter MFS_1_like PF12832.7 CTQ26922.1 - 3.7e-30 105.1 31.6 7.4e-30 104.1 31.6 1.4 1 1 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 CTQ26922.1 - 2.1e-13 49.9 79.5 1.4e-08 34.1 47.6 2.8 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 CTQ26922.1 - 2e-06 26.9 29.1 3e-06 26.3 29.1 1.2 1 0 0 1 1 1 1 LacY proton/sugar symporter AP_endonuc_2 PF01261.24 CTQ26923.1 - 1.8e-36 125.6 0.4 2.2e-36 125.3 0.4 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 CTQ26923.1 - 4e-20 71.3 0.2 7.6e-20 70.4 0.2 1.5 1 0 0 1 1 1 1 AP endonuclease family 2 C terminus GFO_IDH_MocA PF01408.22 CTQ26924.1 - 5.6e-28 98.2 0.6 9.1e-28 97.5 0.6 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 CTQ26924.1 - 1.2e-09 38.9 0.7 2.8e-09 37.7 0.7 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA_C PF02894.17 CTQ26924.1 - 6.4e-07 29.4 0.0 1.4e-06 28.3 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Sacchrp_dh_NADP PF03435.18 CTQ26924.1 - 2.8e-06 27.6 0.3 5.2e-06 26.7 0.3 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Semialdhyde_dh PF01118.24 CTQ26924.1 - 0.00064 20.2 0.1 0.0015 19.0 0.1 1.7 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.17 CTQ26924.1 - 0.037 14.6 0.1 0.09 13.4 0.1 1.7 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DUF2442 PF10387.9 CTQ26924.1 - 0.053 13.8 0.0 0.37 11.1 0.0 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2442) OCD_Mu_crystall PF02423.15 CTQ26924.1 - 0.055 12.4 0.1 0.089 11.7 0.1 1.3 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family CRA_rpt PF07046.11 CTQ26925.1 - 0.13 12.4 1.8 0.24 11.6 1.8 1.3 1 0 0 1 1 1 0 Cytoplasmic repetitive antigen (CRA) like repeat Peripla_BP_3 PF13377.6 CTQ26926.1 - 6.1e-43 147.0 1.6 1.3e-42 146.0 1.6 1.5 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ26926.1 - 2.5e-26 92.8 0.2 3.6e-26 92.2 0.2 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 CTQ26926.1 - 2.3e-20 73.3 0.0 1.3e-19 70.8 0.0 1.9 1 1 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 CTQ26926.1 - 2.5e-20 72.0 1.4 6.9e-20 70.6 1.4 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_6 PF13458.6 CTQ26926.1 - 3.9e-05 23.5 0.2 0.00032 20.5 0.4 2.0 1 1 0 2 2 2 1 Periplasmic binding protein HTH_7 PF02796.15 CTQ26926.1 - 0.0021 18.1 0.1 0.0053 16.8 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_38 PF13936.6 CTQ26926.1 - 0.0025 17.5 0.5 0.01 15.5 0.1 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain Crp PF00325.20 CTQ26926.1 - 0.0094 15.6 0.0 0.024 14.3 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family Glyco_transf_4 PF13439.6 CTQ26926.1 - 0.013 15.5 0.1 0.023 14.7 0.1 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 HTH_23 PF13384.6 CTQ26926.1 - 0.017 14.9 0.1 0.062 13.1 0.1 2.0 1 1 0 1 1 1 0 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 CTQ26926.1 - 0.019 14.4 0.1 0.051 13.0 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_3 PF01381.22 CTQ26926.1 - 0.024 14.7 0.1 0.066 13.3 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix MRP-L20 PF12824.7 CTQ26926.1 - 0.034 14.3 0.2 0.047 13.9 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 HTH_31 PF13560.6 CTQ26926.1 - 0.043 14.2 0.0 0.043 14.2 0.0 3.1 3 1 0 3 3 3 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ26926.1 - 0.07 13.1 0.1 0.2 11.7 0.1 1.8 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF3853 PF12964.7 CTQ26926.1 - 0.091 12.9 0.0 0.22 11.7 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3853) Trp_repressor PF01371.19 CTQ26926.1 - 0.096 12.8 0.2 0.33 11.1 0.2 1.9 2 0 0 2 2 2 0 Trp repressor protein TnsD PF15978.5 CTQ26926.1 - 0.31 10.0 0.8 0.5 9.3 0.2 1.6 2 0 0 2 2 2 0 Tn7-like transposition protein D MS_channel PF00924.18 CTQ26927.1 - 3.2e-67 226.1 0.2 1.3e-65 220.8 0.2 2.3 1 1 0 1 1 1 1 Mechanosensitive ion channel MFS_1 PF07690.16 CTQ26928.1 - 4.4e-37 127.8 43.9 4.4e-37 127.8 43.9 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ26928.1 - 3.4e-10 39.4 21.1 8.3e-08 31.5 8.5 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter OATP PF03137.20 CTQ26928.1 - 0.93 7.7 10.1 0.028 12.7 0.4 2.8 3 0 0 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family MLTR_LBD PF17765.1 CTQ26929.1 - 5.6e-35 120.9 0.1 7.9e-35 120.5 0.1 1.2 1 0 0 1 1 1 1 MmyB-like transcription regulator ligand binding domain HTH_31 PF13560.6 CTQ26929.1 - 7.8e-15 55.0 5.4 1.8e-14 53.8 3.6 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ26929.1 - 0.026 14.6 0.0 0.065 13.3 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix PAS_8 PF13188.7 CTQ26929.1 - 0.1 12.7 0.0 0.26 11.4 0.0 1.7 1 0 0 1 1 1 0 PAS domain DUF2157 PF09925.9 CTQ26931.1 - 8.6e-06 25.6 8.4 8.6e-06 25.6 8.4 3.4 2 1 1 3 3 3 2 Predicted membrane protein (DUF2157) DUF3852 PF12963.7 CTQ26931.1 - 0.29 11.5 0.1 0.29 11.5 0.1 2.4 4 0 0 4 4 4 0 Protein of unknown function (DUF3852) Gp49 PF05973.14 CTQ26932.1 - 6.6e-23 80.7 0.0 7.7e-23 80.5 0.0 1.1 1 0 0 1 1 1 1 Phage derived protein Gp49-like (DUF891) HTH_3 PF01381.22 CTQ26933.1 - 1.5e-13 50.6 0.0 2.2e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ26933.1 - 2.1e-13 50.4 1.7 2.9e-13 50.0 1.7 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 CTQ26933.1 - 5.9e-10 39.0 0.5 7.7e-10 38.6 0.5 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ26933.1 - 8.3e-06 25.5 0.7 1.3e-05 24.8 0.7 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_19 PF12844.7 CTQ26933.1 - 9.9e-06 25.5 0.0 1.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 CTQ26933.1 - 0.00012 21.8 0.1 0.00018 21.3 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 CTQ26933.1 - 0.00026 21.1 0.0 0.00036 20.7 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_38 PF13936.6 CTQ26933.1 - 0.00035 20.3 0.1 0.00053 19.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 CTQ26933.1 - 0.0005 20.5 0.1 0.00077 19.8 0.1 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_24 PF13412.6 CTQ26933.1 - 0.0036 16.8 0.0 0.006 16.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 CTQ26933.1 - 0.0082 15.7 0.2 0.013 15.0 0.2 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Crp_2 PF13545.6 CTQ26933.1 - 0.0098 15.9 1.1 0.016 15.2 1.1 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 CTQ26933.1 - 0.011 15.1 0.2 0.011 15.1 0.2 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 UMP1 PF05348.11 CTQ26933.1 - 0.023 14.9 0.2 0.029 14.6 0.2 1.1 1 0 0 1 1 1 0 Proteasome maturation factor UMP1 HTH_29 PF13551.6 CTQ26933.1 - 0.026 14.5 0.7 0.1 12.6 0.1 2.1 1 1 2 3 3 3 0 Winged helix-turn helix GerE PF00196.19 CTQ26933.1 - 0.03 13.9 0.0 0.044 13.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family LacI PF00356.21 CTQ26933.1 - 0.035 13.9 0.2 0.055 13.3 0.2 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family MarR_2 PF12802.7 CTQ26933.1 - 0.037 13.9 0.3 0.06 13.2 0.3 1.5 1 0 0 1 1 1 0 MarR family Trp_repressor PF01371.19 CTQ26933.1 - 0.059 13.5 0.4 0.088 13.0 0.4 1.4 1 1 0 1 1 1 0 Trp repressor protein Sigma70_r4_2 PF08281.12 CTQ26933.1 - 0.06 13.0 0.1 0.14 11.9 0.0 1.6 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_7 PF02796.15 CTQ26933.1 - 0.16 12.1 0.7 0.83 9.8 0.3 2.4 1 1 1 2 2 2 0 Helix-turn-helix domain of resolvase Nitroreductase PF00881.24 CTQ26935.1 - 1.9e-31 109.4 0.1 2.3e-31 109.2 0.1 1.1 1 0 0 1 1 1 1 Nitroreductase family GramPos_pilinD1 PF16555.5 CTQ26935.1 - 0.0033 17.6 0.5 2 8.6 0.2 2.4 1 1 1 2 2 2 2 Gram-positive pilin subunit D1, N-terminal domain TM1586_NiRdase PF14512.6 CTQ26935.1 - 0.0072 15.9 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 Putative TM nitroreductase YjbR PF04237.13 CTQ26936.1 - 1.7e-20 73.3 0.0 2.1e-20 73.1 0.0 1.1 1 0 0 1 1 1 1 YjbR TetR_N PF00440.23 CTQ26937.1 - 4.4e-14 52.0 2.1 8.5e-14 51.1 2.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family RGS PF00615.19 CTQ26937.1 - 0.032 14.5 0.0 0.056 13.7 0.0 1.4 1 0 0 1 1 1 0 Regulator of G protein signaling domain KGG PF10685.9 CTQ26937.1 - 0.061 13.6 0.2 0.18 12.1 0.2 1.9 1 0 0 1 1 1 0 Stress-induced bacterial acidophilic repeat motif Lactamase_B_2 PF12706.7 CTQ26938.1 - 6.8e-42 143.3 0.1 1e-41 142.7 0.1 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 CTQ26938.1 - 9.3e-21 74.4 0.0 1.4e-20 73.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 CTQ26938.1 - 0.00047 20.2 0.2 0.0014 18.6 0.1 1.9 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily DUF2793 PF10983.8 CTQ26938.1 - 0.028 14.3 1.8 0.058 13.3 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2793) HTH_18 PF12833.7 CTQ26939.1 - 2.6e-23 82.1 0.4 3.1e-23 81.8 0.4 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ26939.1 - 2.3e-17 62.6 0.1 3.4e-08 33.4 0.0 2.1 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family DUF1158 PF06643.11 CTQ26940.1 - 5.9e-47 158.1 9.1 6.5e-47 158.0 9.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1158) FUSC-like PF12805.7 CTQ26940.1 - 0.47 9.5 5.0 0.58 9.2 5.0 1.4 1 1 0 1 1 1 0 FUSC-like inner membrane protein yccS E1-E2_ATPase PF00122.20 CTQ26941.1 - 1.7e-53 180.9 1.8 1.7e-53 180.9 1.8 3.3 3 1 1 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 CTQ26941.1 - 8e-40 136.5 11.4 8e-40 136.5 11.4 2.0 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 CTQ26941.1 - 1.1e-20 74.9 3.9 2.5e-19 70.4 3.9 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 CTQ26941.1 - 6.2e-19 67.5 0.0 1.6e-18 66.2 0.0 1.8 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 CTQ26941.1 - 4.6e-13 49.1 0.0 9.4e-13 48.1 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 CTQ26941.1 - 7.2e-06 25.9 0.8 0.0011 18.8 0.5 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ26941.1 - 0.0032 17.9 0.1 0.038 14.4 0.0 2.6 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HlyD_D23 PF16576.5 CTQ26942.1 - 2.8e-16 59.4 1.9 5.9e-10 38.7 1.3 2.3 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 CTQ26942.1 - 1.8e-10 40.5 0.2 1.8e-10 40.5 0.2 4.0 4 0 0 4 4 4 1 Biotin-lipoyl like HlyD_3 PF13437.6 CTQ26942.1 - 1.1e-09 38.9 0.2 0.0022 18.7 0.0 3.5 3 1 0 3 3 3 2 HlyD family secretion protein OEP PF02321.18 CTQ26942.1 - 0.041 13.7 11.3 0.072 12.9 11.3 1.3 1 0 0 1 1 1 0 Outer membrane efflux protein Biotin_lipoyl PF00364.22 CTQ26942.1 - 0.097 12.5 0.0 0.47 10.3 0.0 2.1 2 0 0 2 2 2 0 Biotin-requiring enzyme TPR_MLP1_2 PF07926.12 CTQ26942.1 - 0.27 11.3 5.8 0.44 10.6 5.8 1.3 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Plasmid_RAQPRD PF09686.10 CTQ26942.1 - 1.5 9.1 7.6 2.5 8.3 6.0 2.2 1 1 1 2 2 2 0 Plasmid protein of unknown function (Plasmid_RAQPRD) ACR_tran PF00873.19 CTQ26943.1 - 0 1051.7 19.4 0 1051.6 19.4 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 CTQ26943.1 - 7.2e-16 58.0 34.5 3.5e-10 39.3 18.4 3.7 4 0 0 4 4 4 2 MMPL family MCPsignal PF00015.21 CTQ26943.1 - 0.091 12.6 0.4 0.41 10.4 0.1 2.2 2 0 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain SecD_SecF PF02355.16 CTQ26943.1 - 1.3 8.4 32.7 0.1 12.0 16.9 2.3 2 0 0 2 2 2 0 Protein export membrane protein Patched PF02460.18 CTQ26943.1 - 1.4 6.9 14.6 2.9 5.9 14.6 1.5 1 0 0 1 1 1 0 Patched family NAGPA PF09992.9 CTQ26944.1 - 2.3e-21 76.8 0.0 2.9e-21 76.4 0.0 1.1 1 0 0 1 1 1 1 Phosphodiester glycosidase GCS2 PF04107.13 CTQ26945.1 - 2e-68 230.9 0.0 2.4e-68 230.6 0.0 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) Glu_cys_ligase PF04262.14 CTQ26945.1 - 0.059 12.0 0.0 0.097 11.3 0.0 1.3 1 0 0 1 1 1 0 Glutamate-cysteine ligase SBP_bac_5 PF00496.22 CTQ26946.1 - 4.7e-68 229.9 5.5 6e-68 229.5 5.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle HTH_33 PF13592.6 CTQ26946.1 - 0.14 11.8 0.0 0.32 10.7 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix BPD_transp_1 PF00528.22 CTQ26947.1 - 1.5e-40 138.9 12.3 1.5e-40 138.9 12.3 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component MotA_ExbB PF01618.16 CTQ26947.1 - 0.21 11.3 1.7 0.3 10.9 0.3 1.9 2 0 0 2 2 2 0 MotA/TolQ/ExbB proton channel family DUF3169 PF11368.8 CTQ26947.1 - 0.38 10.2 1.9 1.2 8.6 1.9 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) DUF4079 PF13301.6 CTQ26947.1 - 4.6 7.4 10.8 0.19 11.9 2.7 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF4079) BPD_transp_1 PF00528.22 CTQ26948.1 - 8e-18 64.8 15.9 8e-18 64.8 15.9 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ26948.1 - 6.6e-09 35.6 0.4 6.6e-09 35.6 0.4 3.0 4 1 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 CTQ26949.1 - 7.5e-33 113.9 0.0 1e-32 113.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 CTQ26949.1 - 1.9e-19 70.0 0.3 3.3e-19 69.1 0.3 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_16 PF13191.6 CTQ26949.1 - 1.9e-06 28.4 0.2 3.4e-06 27.6 0.2 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ26949.1 - 2.3e-05 24.7 1.0 0.00024 21.4 1.0 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ26949.1 - 0.00027 20.4 0.2 0.0018 17.7 0.2 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF87 PF01935.17 CTQ26949.1 - 0.00073 19.7 0.1 0.0016 18.6 0.1 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain AAA PF00004.29 CTQ26949.1 - 0.0012 19.3 0.1 0.027 14.9 0.1 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 CTQ26949.1 - 0.0017 18.4 0.2 0.18 11.8 0.1 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 CTQ26949.1 - 0.0021 17.7 0.0 0.0021 17.7 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain RNA_helicase PF00910.22 CTQ26949.1 - 0.0044 17.4 0.0 0.011 16.1 0.0 1.7 1 0 0 1 1 1 1 RNA helicase SbcCD_C PF13558.6 CTQ26949.1 - 0.0052 17.0 0.1 0.026 14.8 0.1 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_25 PF13481.6 CTQ26949.1 - 0.0073 15.9 0.3 0.024 14.2 0.3 1.8 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 CTQ26949.1 - 0.017 14.8 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 CTQ26949.1 - 0.022 14.7 0.2 0.17 11.8 0.1 2.1 2 0 0 2 2 2 0 NACHT domain AAA_33 PF13671.6 CTQ26949.1 - 0.022 14.9 0.0 0.051 13.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ26949.1 - 0.036 13.8 0.3 0.25 11.1 0.3 2.0 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CTQ26949.1 - 0.064 13.8 0.1 0.18 12.3 0.0 1.8 1 1 1 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 CTQ26949.1 - 0.075 12.9 0.2 0.14 12.0 0.2 1.4 1 0 0 1 1 1 0 RsgA GTPase TniB PF05621.11 CTQ26949.1 - 0.09 12.2 0.2 1.2 8.6 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein DEAD PF00270.29 CTQ26949.1 - 0.094 12.5 0.0 0.19 11.5 0.0 1.4 1 1 0 1 1 1 0 DEAD/DEAH box helicase Rad17 PF03215.15 CTQ26949.1 - 0.1 12.5 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain Sigma54_activat PF00158.26 CTQ26949.1 - 0.12 12.1 0.7 0.24 11.1 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain CbiA PF01656.23 CTQ26949.1 - 0.16 12.0 0.0 0.29 11.2 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ABC_tran PF00005.27 CTQ26950.1 - 9e-27 94.3 0.0 1.3e-26 93.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 CTQ26950.1 - 5.6e-18 65.2 0.8 1e-17 64.4 0.8 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 CTQ26950.1 - 3.9e-10 40.0 0.1 4.3e-06 26.7 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 CTQ26950.1 - 0.00011 22.4 0.3 0.0013 19.0 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ26950.1 - 0.00052 19.7 0.0 0.0011 18.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 CTQ26950.1 - 0.0007 19.1 0.1 0.0043 16.5 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ26950.1 - 0.0012 19.3 1.0 0.0022 18.4 1.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain FtsK_SpoIIIE PF01580.18 CTQ26950.1 - 0.012 15.0 0.0 0.019 14.3 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family TniB PF05621.11 CTQ26950.1 - 0.04 13.3 0.0 1.6 8.1 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein ABC_ATPase PF09818.9 CTQ26950.1 - 0.064 12.0 0.3 1 8.1 0.1 2.6 2 1 0 2 2 2 0 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 CTQ26950.1 - 0.14 12.1 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase Pox_A32 PF04665.12 CTQ26950.1 - 0.19 11.2 0.1 0.33 10.4 0.1 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein G-alpha PF00503.20 CTQ26950.1 - 0.3 10.2 0.0 0.35 10.0 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit Peptidase_M20 PF01546.28 CTQ26951.1 - 3.6e-39 134.6 0.4 5e-39 134.2 0.4 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 CTQ26951.1 - 4.3e-07 29.8 0.0 1.1e-06 28.4 0.0 1.6 2 0 0 2 2 2 1 Peptidase family M28 M20_dimer PF07687.14 CTQ26951.1 - 1.6e-06 27.9 0.0 3e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Pilus_CpaD PF09476.10 CTQ26951.1 - 0.018 14.8 0.1 0.03 14.1 0.1 1.3 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) EamA PF00892.20 CTQ26952.1 - 1.2e-28 100.0 36.5 3.1e-14 53.3 13.0 2.0 2 0 0 2 2 2 2 EamA-like transporter family LAB_N PF07578.11 CTQ26952.1 - 0.0019 18.2 0.7 0.0072 16.4 0.1 2.3 2 0 0 2 2 2 1 Lipid A Biosynthesis N-terminal domain YfhO PF09586.10 CTQ26952.1 - 7.6 4.6 9.7 0.38 8.9 2.7 1.8 1 1 2 3 3 3 0 Bacterial membrane protein YfhO Aminotran_1_2 PF00155.21 CTQ26953.1 - 4.8e-34 118.1 0.0 6.1e-34 117.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 CTQ26953.1 - 1.1e-10 41.0 5.4 1.9e-10 40.3 0.3 3.1 3 0 0 3 3 3 1 Bacterial regulatory proteins, gntR family Aminotran_MocR PF12897.7 CTQ26953.1 - 0.00021 20.2 0.0 0.00032 19.6 0.0 1.2 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase MarR PF01047.22 CTQ26953.1 - 0.046 13.7 0.1 0.18 11.8 0.0 2.0 2 0 0 2 2 2 0 MarR family Cys_Met_Meta_PP PF01053.20 CTQ26953.1 - 0.05 12.1 0.0 0.076 11.5 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme HTH_Crp_2 PF13545.6 CTQ26953.1 - 0.079 12.9 0.1 0.26 11.3 0.1 1.9 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain GGDEF_2 PF17853.1 CTQ26953.1 - 0.54 10.5 5.0 0.66 10.3 0.3 3.3 3 2 0 3 3 3 0 GGDEF-like domain GntR PF00392.21 CTQ26954.1 - 3.9e-12 45.6 0.0 1.5e-11 43.7 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family Aminotran_1_2 PF00155.21 CTQ26954.1 - 6.9e-10 38.6 0.0 2.4e-09 36.9 0.0 1.8 1 1 0 1 1 1 1 Aminotransferase class I and II DUF2011 PF09428.10 CTQ26954.1 - 0.036 14.3 0.0 0.12 12.7 0.0 1.8 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF2011) Abhydrolase_6 PF12697.7 CTQ26954.1 - 2.2 8.9 9.7 2.3 8.7 2.7 2.3 2 0 0 2 2 2 0 Alpha/beta hydrolase family SBP_bac_3 PF00497.20 CTQ26955.1 - 8e-51 172.6 0.0 9.4e-51 172.4 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ26955.1 - 1.8e-07 31.3 0.0 9.1e-05 22.6 0.0 2.3 1 1 1 2 2 2 2 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 CTQ26955.1 - 0.00047 20.2 0.0 0.00074 19.5 0.0 1.4 1 1 0 1 1 1 1 NMT1/THI5 like BPD_transp_1 PF00528.22 CTQ26956.1 - 3.9e-20 72.4 10.0 6.3e-20 71.7 10.0 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ26957.1 - 7.6e-16 58.4 18.4 7.6e-16 58.4 18.4 1.5 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component EI24 PF07264.11 CTQ26957.1 - 1.2 9.4 19.7 0.11 12.8 8.5 2.1 2 0 0 2 2 2 0 Etoposide-induced protein 2.4 (EI24) ABC_tran PF00005.27 CTQ26958.1 - 4.5e-35 121.2 0.1 6.1e-35 120.7 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26958.1 - 1.5e-11 44.7 0.0 2.4e-06 27.6 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26958.1 - 2.3e-07 30.5 0.3 6.8e-06 25.7 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_13 PF13166.6 CTQ26958.1 - 3.7e-05 22.6 0.0 0.00065 18.5 0.0 2.0 1 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CTQ26958.1 - 0.00061 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 CTQ26958.1 - 0.001 18.8 0.7 0.004 16.9 0.2 1.9 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 CTQ26958.1 - 0.0012 19.4 0.0 0.0021 18.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ26958.1 - 0.0032 17.4 0.0 0.0065 16.4 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase ABC_ATPase PF09818.9 CTQ26958.1 - 0.013 14.3 0.0 1.9 7.2 0.0 2.2 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_16 PF13191.6 CTQ26958.1 - 0.016 15.6 0.4 0.024 15.0 0.4 1.6 1 1 0 1 1 1 0 AAA ATPase domain G-alpha PF00503.20 CTQ26958.1 - 0.023 13.9 0.0 0.023 13.9 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_22 PF13401.6 CTQ26958.1 - 0.084 13.1 0.3 0.23 11.7 0.3 2.0 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ26958.1 - 0.089 12.7 0.1 0.66 9.9 0.0 2.1 2 0 0 2 2 2 0 NACHT domain DUF87 PF01935.17 CTQ26958.1 - 0.1 12.7 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_33 PF13671.6 CTQ26958.1 - 0.12 12.6 0.1 0.21 11.7 0.1 1.8 1 1 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 CTQ26958.1 - 0.15 12.0 0.1 0.57 10.1 0.1 2.1 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea ST7 PF04184.12 CTQ26958.1 - 0.16 10.4 0.1 0.31 9.5 0.0 1.4 2 0 0 2 2 2 0 ST7 protein adh_short PF00106.25 CTQ26959.1 - 2.7e-47 160.8 0.0 3.2e-47 160.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ26959.1 - 1.3e-34 119.8 0.0 1.5e-34 119.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ26959.1 - 1.7e-13 50.9 0.0 2.2e-13 50.5 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ26959.1 - 0.0031 17.0 0.0 0.0061 16.0 0.0 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Aminotran_3 PF00202.21 CTQ26960.1 - 8.3e-94 314.5 0.0 9.9e-94 314.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Defensin_3 PF08131.11 CTQ26961.1 - 0.48 10.7 1.7 18 5.6 0.1 2.2 2 0 0 2 2 2 0 Defensin-like peptide family ABC_tran PF00005.27 CTQ26962.1 - 5.4e-32 111.2 0.0 7.4e-32 110.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26962.1 - 3e-14 53.6 1.2 4.1e-08 33.4 0.2 2.3 1 1 2 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ26962.1 - 5.6e-06 26.9 0.4 7.8e-06 26.4 0.4 1.2 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 CTQ26962.1 - 4.7e-05 22.9 0.2 0.00062 19.3 0.2 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 CTQ26962.1 - 0.00062 20.2 0.0 0.069 13.6 0.0 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CTQ26962.1 - 0.00088 19.6 0.2 0.0054 17.0 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 CTQ26962.1 - 0.002 18.1 0.1 0.45 10.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 CTQ26962.1 - 0.0031 17.2 0.1 0.0059 16.3 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 CTQ26962.1 - 0.0033 18.0 0.0 0.25 11.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 CTQ26962.1 - 0.005 16.8 0.0 0.0088 16.0 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 CTQ26962.1 - 0.0072 15.9 0.0 0.59 9.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 CTQ26962.1 - 0.012 15.4 0.1 0.11 12.2 0.1 2.1 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 CTQ26962.1 - 0.018 15.3 0.1 0.06 13.6 0.0 1.9 2 1 0 2 2 2 0 AAA domain TniB PF05621.11 CTQ26962.1 - 0.052 13.0 0.1 2.1 7.7 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein Rad17 PF03215.15 CTQ26962.1 - 0.055 13.4 0.0 0.091 12.7 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain SbcCD_C PF13558.6 CTQ26962.1 - 0.059 13.6 0.1 0.71 10.2 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 CTQ26962.1 - 0.14 11.8 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 CTQ26962.1 - 0.16 12.1 0.1 0.47 10.6 0.1 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase PRK PF00485.18 CTQ26962.1 - 0.17 11.6 0.0 0.29 10.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family ABC_tran PF00005.27 CTQ26963.1 - 2.3e-22 80.0 0.0 3e-22 79.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 CTQ26963.1 - 1.9e-05 25.2 0.4 3.3e-05 24.4 0.4 1.3 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 CTQ26963.1 - 0.00012 21.5 0.1 0.0022 17.5 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ26963.1 - 0.00024 21.4 0.9 0.0038 17.5 0.9 2.2 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 CTQ26963.1 - 0.00028 20.8 0.1 0.0092 15.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Mg_chelatase PF01078.21 CTQ26963.1 - 0.0021 17.5 0.0 0.0054 16.1 0.0 1.6 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 CTQ26963.1 - 0.0033 17.3 0.5 0.13 12.1 0.0 2.9 2 1 0 2 2 2 1 NACHT domain IstB_IS21 PF01695.17 CTQ26963.1 - 0.032 14.0 0.0 0.32 10.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF87 PF01935.17 CTQ26963.1 - 0.063 13.4 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain RsgA_GTPase PF03193.16 CTQ26963.1 - 0.069 13.1 0.1 0.18 11.7 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase AnmK PF03702.14 CTQ26963.1 - 0.087 11.9 0.1 0.15 11.1 0.0 1.4 2 0 0 2 2 2 0 Anhydro-N-acetylmuramic acid kinase AAA PF00004.29 CTQ26963.1 - 0.11 12.9 0.1 0.39 11.1 0.1 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 CTQ26963.1 - 0.15 12.2 0.8 0.44 10.7 0.4 1.9 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.6 CTQ26963.1 - 0.16 11.8 0.0 0.32 10.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain BPD_transp_1 PF00528.22 CTQ26964.1 - 2.5e-29 102.3 9.7 2.5e-29 102.3 9.7 2.0 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ26964.1 - 8.8e-12 44.8 1.2 8.8e-12 44.8 1.2 2.8 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 CTQ26965.1 - 3.3e-42 144.3 9.2 3.3e-42 144.3 9.2 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3169 PF11368.8 CTQ26965.1 - 0.13 11.8 0.5 0.34 10.4 0.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) SLC3A2_N PF16028.5 CTQ26965.1 - 3.7 7.2 5.1 21 4.8 0.0 3.0 2 1 1 3 3 3 0 Solute carrier family 3 member 2 N-terminus SBP_bac_5 PF00496.22 CTQ26966.1 - 9.7e-68 228.8 6.5 1.2e-67 228.5 6.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Acetyltransf_3 PF13302.7 CTQ26967.1 - 3.3e-16 60.2 0.5 4.4e-16 59.8 0.1 1.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ26967.1 - 6.1e-05 23.2 0.0 8.6e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 CTQ26967.1 - 0.0053 16.9 0.0 0.0075 16.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GMC_oxred_N PF00732.19 CTQ26968.1 - 7.1e-104 347.3 0.0 1.2e-103 346.5 0.0 1.4 2 0 0 2 2 2 1 GMC oxidoreductase GMC_oxred_C PF05199.13 CTQ26968.1 - 5.8e-42 143.6 0.0 9.5e-42 142.9 0.0 1.4 1 0 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 CTQ26968.1 - 0.0018 17.9 0.0 0.23 11.0 0.0 2.9 3 0 0 3 3 3 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 CTQ26968.1 - 0.0092 15.1 0.0 0.013 14.5 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein NAD_binding_8 PF13450.6 CTQ26968.1 - 0.022 15.0 0.0 0.059 13.6 0.0 1.8 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 CTQ26968.1 - 0.023 13.8 0.0 0.31 10.1 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain Pyr_redox_2 PF07992.14 CTQ26968.1 - 0.082 12.1 0.0 0.18 11.0 0.0 1.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 CTQ26968.1 - 0.084 12.1 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Thi4 family Aldedh PF00171.22 CTQ26969.1 - 3.2e-177 589.7 0.0 3.7e-177 589.5 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family TetR_C_6 PF13977.6 CTQ26970.1 - 8.3e-29 100.1 3.8 9.2e-29 100.0 0.8 2.3 1 1 1 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_N PF00440.23 CTQ26970.1 - 3.8e-14 52.2 0.3 8.5e-14 51.1 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family LacI PF00356.21 CTQ26970.1 - 0.018 14.8 0.0 0.034 13.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family DUF3390 PF11870.8 CTQ26970.1 - 0.061 13.7 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) HTH_5 PF01022.20 CTQ26970.1 - 0.11 12.3 0.0 0.42 10.5 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HlyD_D4 PF16572.5 CTQ26970.1 - 0.76 9.7 4.1 7.8 6.5 0.2 3.1 3 0 0 3 3 3 0 Long alpha hairpin domain of cation efflux system protein, CusB TetR_C_28 PF17937.1 CTQ26970.1 - 0.86 10.1 8.7 0.23 12.0 1.2 2.9 3 1 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain TetR_C_31 PF17940.1 CTQ26970.1 - 2.6 8.3 5.9 0.73 10.1 0.5 2.4 2 1 1 3 3 3 0 Tetracyclin repressor-like, C-terminal domain BCCT PF02028.17 CTQ26971.1 - 6.1e-175 582.3 41.2 7.2e-175 582.1 41.2 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DUF5510 PF17629.2 CTQ26971.1 - 0.28 11.1 2.6 1.4 8.9 0.1 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5510) EbsA PF17255.2 CTQ26971.1 - 4.2 7.7 7.3 0.2 12.0 0.5 2.3 2 0 0 2 2 2 0 EbsA-like protein Ivy PF08816.11 CTQ26972.1 - 1.3e-29 102.8 0.1 1.5e-29 102.5 0.1 1.1 1 0 0 1 1 1 1 Inhibitor of vertebrate lysozyme (Ivy) YhfT PF10797.9 CTQ26972.1 - 0.11 11.5 0.3 0.14 11.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function MS_channel PF00924.18 CTQ26973.1 - 3.9e-36 124.5 12.4 1.9e-30 106.0 5.3 2.6 3 0 0 3 3 3 2 Mechanosensitive ion channel Atg14 PF10186.9 CTQ26973.1 - 0.04 13.0 0.2 0.057 12.5 0.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4271 PF14093.6 CTQ26973.1 - 0.86 9.5 19.7 1.5 8.6 11.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4271) SNARE_assoc PF09335.11 CTQ26973.1 - 1.7 9.2 8.3 0.25 11.8 1.1 2.6 2 0 0 2 2 2 0 SNARE associated Golgi protein LysR_substrate PF03466.20 CTQ26974.1 - 2.2e-37 128.5 3.9 3.4e-37 127.8 3.9 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ26974.1 - 2.7e-22 78.5 1.7 6.3e-22 77.3 1.7 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family P22_Cro PF14549.6 CTQ26974.1 - 0.0012 18.6 0.1 0.0023 17.8 0.1 1.4 1 0 0 1 1 1 1 DNA-binding transcriptional regulator Cro HTH_20 PF12840.7 CTQ26974.1 - 0.0061 16.6 0.1 0.016 15.2 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 CTQ26974.1 - 0.018 14.9 0.1 0.076 12.9 0.1 2.1 1 0 0 1 1 1 0 MarR family HTH_5 PF01022.20 CTQ26974.1 - 0.025 14.5 0.6 0.061 13.2 0.6 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_28 PF13518.6 CTQ26974.1 - 0.043 13.9 0.1 0.25 11.5 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.12 CTQ26974.1 - 0.052 13.5 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 HTH domain GST_N_3 PF13417.6 CTQ26975.1 - 1.9e-15 57.0 0.0 4.7e-15 55.8 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ26975.1 - 1.1e-09 38.5 0.0 5.2e-09 36.3 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 CTQ26975.1 - 9.9e-07 29.0 0.0 1.8e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain adh_short_C2 PF13561.6 CTQ26976.1 - 2.5e-67 226.9 1.7 2.9e-67 226.7 1.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ26976.1 - 1.2e-52 178.2 0.6 1.6e-52 177.8 0.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ26976.1 - 7.2e-13 48.8 0.8 9.8e-13 48.4 0.8 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ26976.1 - 0.086 12.3 0.1 0.13 11.7 0.1 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 CTQ26976.1 - 0.096 12.6 0.2 0.31 10.9 0.2 1.8 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain adh_short_C2 PF13561.6 CTQ26977.1 - 4e-65 219.6 0.6 2.9e-64 216.8 0.6 1.8 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ26977.1 - 5.8e-57 192.3 0.2 7.5e-57 191.9 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ26977.1 - 2.4e-15 56.9 0.5 3.2e-15 56.5 0.5 1.2 1 0 0 1 1 1 1 KR domain 2-Hacid_dh_C PF02826.19 CTQ26977.1 - 0.0081 15.5 0.1 0.04 13.3 0.0 2.0 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.21 CTQ26977.1 - 0.045 13.2 0.1 0.071 12.6 0.1 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 CTQ26977.1 - 0.073 13.7 0.1 0.15 12.7 0.1 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Polysacc_synt_2 PF02719.15 CTQ26977.1 - 0.074 12.2 0.1 0.094 11.8 0.1 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 3HCDH_N PF02737.18 CTQ26977.1 - 0.1 12.4 0.2 0.15 11.9 0.2 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BPD_transp_2 PF02653.16 CTQ26978.1 - 1.1e-43 149.4 42.7 1.1e-43 149.4 42.7 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 CTQ26979.1 - 9.3e-54 181.7 0.3 2.8e-28 99.2 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ26979.1 - 5.1e-12 46.2 0.5 0.0011 18.8 0.1 3.2 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26979.1 - 0.00016 21.2 3.0 0.00067 19.2 1.2 2.6 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 CTQ26979.1 - 0.0002 21.2 1.2 0.00055 19.8 0.5 1.9 2 1 1 3 3 3 1 AAA ATPase domain TsaE PF02367.17 CTQ26979.1 - 0.00071 19.6 0.5 1.2 9.2 0.2 3.1 3 1 0 3 3 3 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_29 PF13555.6 CTQ26979.1 - 0.00086 19.0 0.1 0.0093 15.7 0.0 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ26979.1 - 0.00094 19.1 0.3 0.0072 16.3 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_23 PF13476.6 CTQ26979.1 - 0.0019 18.7 0.3 0.015 15.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 CTQ26979.1 - 0.0025 17.5 0.9 0.022 14.5 0.2 2.6 2 1 0 2 2 2 1 AAA domain Dynamin_N PF00350.23 CTQ26979.1 - 0.0043 17.1 0.0 0.11 12.5 0.0 2.2 2 0 0 2 2 2 1 Dynamin family AAA_13 PF13166.6 CTQ26979.1 - 0.0044 15.7 0.2 0.0074 15.0 0.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ26979.1 - 0.011 16.0 4.2 0.49 10.7 0.0 3.5 4 0 0 4 4 4 0 AAA domain IstB_IS21 PF01695.17 CTQ26979.1 - 0.015 15.1 0.7 0.67 9.7 0.1 2.8 3 0 0 3 3 3 0 IstB-like ATP binding protein DLIC PF05783.11 CTQ26979.1 - 0.034 13.0 0.0 0.07 12.0 0.0 1.4 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA PF00004.29 CTQ26979.1 - 0.049 14.1 4.6 0.83 10.1 1.5 3.5 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.7 CTQ26979.1 - 0.073 12.0 0.0 0.17 10.8 0.0 1.6 1 0 0 1 1 1 0 AAA-like domain AAA_24 PF13479.6 CTQ26979.1 - 0.13 12.0 0.1 0.51 10.0 0.0 2.1 3 0 0 3 3 3 0 AAA domain Zeta_toxin PF06414.12 CTQ26979.1 - 0.13 11.5 0.1 2.1 7.6 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin Mg_chelatase PF01078.21 CTQ26979.1 - 0.17 11.3 1.0 6.1 6.2 0.1 3.4 4 0 0 4 4 4 0 Magnesium chelatase, subunit ChlI DUF2291 PF10054.9 CTQ26980.1 - 2.3e-51 174.4 0.1 2.6e-51 174.2 0.1 1.0 1 0 0 1 1 1 1 Predicted periplasmic lipoprotein (DUF2291) Peripla_BP_4 PF13407.6 CTQ26981.1 - 6e-51 173.5 13.4 7.6e-51 173.2 13.4 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ26981.1 - 2.2e-19 70.0 3.2 2.9e-19 69.6 3.2 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ26981.1 - 2.8e-06 27.8 0.2 6.3e-06 26.6 0.1 1.6 2 0 0 2 2 2 1 Periplasmic binding protein-like domain PucR PF07905.11 CTQ26981.1 - 0.00014 22.1 0.1 0.00036 20.8 0.1 1.7 1 0 0 1 1 1 1 Purine catabolism regulatory protein-like family LpxI_N PF17930.1 CTQ26981.1 - 0.042 13.7 3.2 0.11 12.4 0.4 2.5 3 0 0 3 3 3 0 LpxI N-terminal domain Asparaginase_C PF17763.1 CTQ26981.1 - 0.43 10.8 3.3 2.8 8.2 0.1 2.8 2 1 0 2 2 2 0 Glutaminase/Asparaginase C-terminal domain ATPgrasp_N PF18130.1 CTQ26981.1 - 0.48 11.0 6.6 6.1 7.5 0.0 3.2 4 1 0 4 4 4 0 ATP-grasp N-terminal domain NAD_binding_3 PF03447.16 CTQ26981.1 - 0.52 11.0 4.4 0.61 10.7 0.4 2.5 2 1 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain FGGY_N PF00370.21 CTQ26983.1 - 1.1e-59 202.0 0.0 1.5e-59 201.6 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 CTQ26983.1 - 2.4e-43 148.2 1.8 2.8e-43 148.0 0.7 1.7 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain Sugar-bind PF04198.13 CTQ26984.1 - 2.2e-63 213.8 0.0 2.7e-63 213.5 0.0 1.0 1 0 0 1 1 1 1 Putative sugar-binding domain MarR_2 PF12802.7 CTQ26984.1 - 9e-05 22.3 0.0 0.00027 20.8 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 CTQ26984.1 - 0.00083 19.3 0.1 0.0025 17.8 0.0 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_23 PF13384.6 CTQ26984.1 - 0.00085 19.1 0.1 0.0027 17.4 0.1 1.9 1 0 0 1 1 1 1 Homeodomain-like domain MarR PF01047.22 CTQ26984.1 - 0.0016 18.3 0.0 0.0039 17.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 CTQ26984.1 - 0.002 17.7 0.0 0.0057 16.2 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding KORA PF16509.5 CTQ26984.1 - 0.014 15.6 0.2 0.21 11.9 0.1 2.3 2 0 0 2 2 2 0 TrfB plasmid transcriptional repressor KorB PF08535.10 CTQ26984.1 - 0.018 15.1 0.0 0.037 14.1 0.0 1.6 1 0 0 1 1 1 0 KorB domain HTH_29 PF13551.6 CTQ26984.1 - 0.021 14.9 0.0 0.056 13.5 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix Sigma70_r4 PF04545.16 CTQ26984.1 - 0.021 14.3 0.1 0.046 13.2 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_38 PF13936.6 CTQ26984.1 - 0.041 13.6 0.1 0.17 11.6 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 CTQ26984.1 - 0.055 13.2 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 Transketolase_N PF00456.21 CTQ26985.1 - 5.9e-40 137.2 0.0 8.6e-40 136.7 0.0 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 CTQ26985.1 - 2.1e-11 43.5 0.1 9.7e-06 25.0 0.1 2.8 2 1 0 3 3 3 2 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 CTQ26985.1 - 5.2e-08 32.2 0.0 7.2e-08 31.7 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 CTQ26985.1 - 2.3e-06 27.5 0.2 6e-06 26.1 0.2 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Transketolase_C PF02780.20 CTQ26986.1 - 7.5e-29 100.1 0.2 1.2e-28 99.5 0.2 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transket_pyr PF02779.24 CTQ26986.1 - 1.8e-20 73.4 0.0 3e-20 72.6 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain PFOR_II PF17147.4 CTQ26986.1 - 1.2e-05 25.6 0.0 2.4e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II 4PPT_N PF17837.1 CTQ26987.1 - 7.3e-17 61.2 0.8 1.2e-16 60.6 0.8 1.3 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase N-terminal domain ACPS PF01648.20 CTQ26987.1 - 1.8e-11 44.1 0.0 2.6e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily TonB_dep_Rec PF00593.24 CTQ26988.1 - 2.9e-53 182.4 41.3 2.9e-53 182.4 41.3 1.7 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 CTQ26988.1 - 3.3e-29 101.6 0.8 3.3e-29 101.6 0.8 2.1 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain DUF3327 PF11806.8 CTQ26989.1 - 1.5e-43 148.4 2.1 1.5e-43 148.4 2.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF3327) Esterase PF00756.20 CTQ26989.1 - 2.1e-38 132.4 0.0 2.9e-38 132.0 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 CTQ26989.1 - 2.4e-05 23.9 0.1 4.2e-05 23.1 0.1 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family MbtH PF03621.13 CTQ26990.1 - 5.7e-23 80.1 1.1 6.7e-23 79.9 1.1 1.1 1 0 0 1 1 1 1 MbtH-like protein AMP-binding PF00501.28 CTQ26991.1 - 1.7e-98 330.0 0.0 2.4e-98 329.5 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme Condensation PF00668.20 CTQ26991.1 - 6.1e-87 292.2 0.0 7.7e-87 291.9 0.0 1.1 1 0 0 1 1 1 1 Condensation domain Thioesterase PF00975.20 CTQ26991.1 - 5.7e-51 173.8 0.2 8.1e-47 160.3 0.1 2.8 2 0 0 2 2 2 2 Thioesterase domain PP-binding PF00550.25 CTQ26991.1 - 8.8e-12 45.2 0.2 3.5e-11 43.3 0.2 2.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site AMP-binding_C PF13193.6 CTQ26991.1 - 1.8e-06 28.8 0.0 7.2e-06 26.9 0.0 2.1 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Abhydrolase_1 PF00561.20 CTQ26991.1 - 0.022 14.4 0.0 0.056 13.1 0.0 1.6 1 0 0 1 1 1 0 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 CTQ26991.1 - 0.035 14.0 0.3 0.12 12.3 0.0 2.0 2 0 0 2 2 2 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CTQ26991.1 - 0.083 12.1 0.0 0.23 10.7 0.0 1.7 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Lipase_3 PF01764.25 CTQ26991.1 - 0.083 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Lipase (class 3) ABC_tran PF00005.27 CTQ26992.1 - 2.1e-33 115.8 0.0 2.7e-33 115.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ26992.1 - 2.9e-10 40.5 0.4 3.8e-06 26.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ26992.1 - 2.9e-09 36.7 0.0 3.3e-07 30.0 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ26992.1 - 2.6e-06 27.9 0.2 1.1e-05 25.9 0.1 1.7 1 1 1 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 CTQ26992.1 - 3.2e-06 26.8 0.0 5.8e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ26992.1 - 3e-05 23.9 0.0 0.00028 20.7 0.0 1.9 1 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 CTQ26992.1 - 0.00015 22.3 0.3 0.00017 22.2 0.3 1.3 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ26992.1 - 0.00022 21.5 0.2 0.0013 19.1 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 CTQ26992.1 - 0.00037 20.1 0.2 0.0011 18.5 0.1 1.9 1 1 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 CTQ26992.1 - 0.0014 17.5 0.1 0.062 12.1 0.0 2.3 2 1 0 2 2 2 1 Predicted ATPase of the ABC class Rad17 PF03215.15 CTQ26992.1 - 0.0015 18.5 0.0 0.0025 17.7 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain Mg_chelatase PF01078.21 CTQ26992.1 - 0.0018 17.7 0.0 0.0033 16.9 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_27 PF13514.6 CTQ26992.1 - 0.0021 17.7 0.0 0.0037 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 CTQ26992.1 - 0.0022 18.3 0.0 0.006 16.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CTQ26992.1 - 0.0023 17.7 0.0 0.0054 16.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 CTQ26992.1 - 0.0027 17.7 0.2 0.059 13.3 0.0 2.2 2 0 0 2 2 2 1 NACHT domain RsgA_GTPase PF03193.16 CTQ26992.1 - 0.0031 17.4 0.0 0.0054 16.6 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 CTQ26992.1 - 0.0069 16.4 0.1 0.053 13.5 0.0 2.3 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 CTQ26992.1 - 0.0089 16.6 0.0 0.017 15.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain NYN PF01936.18 CTQ26992.1 - 0.012 16.1 0.0 0.017 15.6 0.0 1.2 1 0 0 1 1 1 0 NYN domain ATP-synt_ab PF00006.25 CTQ26992.1 - 0.018 14.7 0.0 0.061 13.0 0.0 1.8 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Adeno_IVa2 PF02456.15 CTQ26992.1 - 0.02 13.7 0.0 0.062 12.1 0.0 1.7 2 0 0 2 2 2 0 Adenovirus IVa2 protein Rad51 PF08423.11 CTQ26992.1 - 0.024 13.9 0.0 0.043 13.1 0.0 1.4 1 0 0 1 1 1 0 Rad51 AAA_14 PF13173.6 CTQ26992.1 - 0.047 13.7 0.0 0.11 12.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 CTQ26992.1 - 0.05 13.7 0.1 0.13 12.4 0.1 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA PF00004.29 CTQ26992.1 - 0.072 13.5 0.0 0.15 12.5 0.0 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 CTQ26992.1 - 0.078 13.4 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 RNA helicase G-alpha PF00503.20 CTQ26992.1 - 0.12 11.5 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_33 PF13671.6 CTQ26992.1 - 0.13 12.4 0.2 0.23 11.6 0.2 1.8 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 CTQ26992.1 - 0.13 11.5 0.0 0.23 10.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin ATPase_2 PF01637.18 CTQ26992.1 - 0.16 11.9 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea FecCD PF01032.18 CTQ26993.1 - 1.7e-84 283.5 36.8 2.1e-84 283.2 36.8 1.0 1 0 0 1 1 1 1 FecCD transport family FecCD PF01032.18 CTQ26994.1 - 3.1e-90 302.4 32.4 3.8e-90 302.1 32.4 1.0 1 0 0 1 1 1 1 FecCD transport family Multi_Drug_Res PF00893.19 CTQ26994.1 - 2.2 9.0 8.8 1.7 9.4 0.9 2.9 3 0 0 3 3 3 0 Small Multidrug Resistance protein MFS_1 PF07690.16 CTQ26995.1 - 2.9e-25 89.0 60.4 1.2e-16 60.7 25.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 CTQ26995.1 - 1.1e-22 80.2 34.6 1.4e-22 79.8 34.6 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector PTR2 PF00854.21 CTQ26995.1 - 0.0029 16.5 1.3 0.62 8.8 0.2 2.3 2 0 0 2 2 2 2 POT family Peripla_BP_2 PF01497.18 CTQ26996.1 - 1.7e-26 93.3 0.0 2.1e-26 92.9 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Chorismate_bind PF00425.18 CTQ26997.1 - 7.6e-67 225.6 0.0 9.5e-67 225.3 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme AMP-binding PF00501.28 CTQ26998.1 - 4.7e-73 246.2 0.0 5.8e-73 245.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CTQ26998.1 - 4.2e-10 40.5 0.2 1.4e-09 38.7 0.2 2.0 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 CTQ26998.1 - 0.021 13.7 0.0 0.047 12.5 0.0 1.5 2 0 0 2 2 2 0 GH3 auxin-responsive promoter SurA_N_2 PF13623.6 CTQ26998.1 - 0.093 12.6 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 SurA N-terminal domain DUF761 PF05553.11 CTQ26998.1 - 0.13 11.8 2.5 3.9 7.1 0.1 2.7 2 0 0 2 2 2 0 Cotton fibre expressed protein Isochorismatase PF00857.20 CTQ26999.1 - 4.8e-39 134.3 0.0 6e-39 134.0 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family PP-binding PF00550.25 CTQ26999.1 - 7.6e-08 32.6 0.1 1.3e-07 31.9 0.1 1.4 1 0 0 1 1 1 1 Phosphopantetheine attachment site adh_short_C2 PF13561.6 CTQ27000.1 - 4.3e-51 173.7 1.2 5.9e-51 173.3 1.2 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27000.1 - 3.7e-45 153.8 2.5 1.5e-44 151.8 2.5 1.7 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ27000.1 - 2.9e-11 43.6 3.4 1.6e-10 41.2 0.2 2.2 2 0 0 2 2 2 1 KR domain Epimerase PF01370.21 CTQ27000.1 - 0.0063 16.0 0.1 0.033 13.7 0.1 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family DFP PF04127.15 CTQ27000.1 - 0.01 15.7 0.1 0.02 14.8 0.1 1.6 1 1 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein NAD_binding_7 PF13241.6 CTQ27000.1 - 0.16 12.4 0.1 0.32 11.5 0.1 1.7 1 1 0 1 1 1 0 Putative NAD(P)-binding 4HBT PF03061.22 CTQ27001.1 - 1.9e-18 66.5 0.1 3e-18 65.9 0.1 1.3 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 CTQ27001.1 - 0.0042 17.2 0.0 0.0057 16.8 0.0 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4442) 4HBT_3 PF13622.6 CTQ27001.1 - 0.093 13.0 0.3 0.12 12.6 0.3 1.2 1 0 0 1 1 1 0 Thioesterase-like superfamily DUF1604 PF07713.13 CTQ27001.1 - 0.12 12.2 0.0 1.8 8.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1604) CstA PF02554.14 CTQ27002.1 - 3.6e-170 565.9 29.7 3.6e-170 565.9 29.7 1.8 2 0 0 2 2 2 1 Carbon starvation protein CstA CstA_5TM PF13722.6 CTQ27002.1 - 4.1e-35 120.6 7.0 4.1e-35 120.6 7.0 3.5 4 0 0 4 4 4 1 5TM C-terminal transporter carbon starvation CstA Baculo_11_kDa PF06143.11 CTQ27002.1 - 1.9 8.2 10.2 6.4 6.4 1.2 3.5 3 1 0 3 3 3 0 Baculovirus 11 kDa family DUF1676 PF07898.13 CTQ27002.1 - 2.7 8.0 6.3 0.21 11.6 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1676) MerE PF05052.12 CTQ27002.1 - 4.8 7.2 8.4 3 7.9 0.4 3.5 3 0 0 3 3 3 0 MerE protein Sel_put PF04328.13 CTQ27003.1 - 1.3e-29 102.0 0.3 1.4e-29 101.9 0.3 1.0 1 0 0 1 1 1 1 Selenoprotein, putative HTH_3 PF01381.22 CTQ27004.1 - 6.1e-12 45.4 0.5 1.2e-11 44.4 0.4 1.5 1 1 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ27004.1 - 2.1e-09 37.6 0.6 3.2e-09 37.0 0.6 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 CTQ27004.1 - 6e-09 35.3 0.1 6.9e-07 28.7 0.1 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.6 CTQ27004.1 - 2.2e-06 27.3 0.7 0.00017 21.3 0.1 2.3 1 1 1 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 CTQ27004.1 - 2.8e-05 24.1 0.2 0.0029 17.7 0.0 2.2 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 CTQ27004.1 - 3.8e-05 23.6 0.0 8e-05 22.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 CTQ27004.1 - 6.6e-05 22.7 0.3 0.0085 15.9 0.2 2.3 1 1 1 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Sigma70_r4_2 PF08281.12 CTQ27004.1 - 8.2e-05 22.2 0.1 0.0021 17.7 0.0 2.3 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 CTQ27004.1 - 9.2e-05 21.9 0.1 0.00067 19.2 0.1 2.1 1 1 1 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 CTQ27004.1 - 0.00042 20.7 0.0 0.0007 20.0 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 CTQ27004.1 - 0.00054 19.9 0.2 0.0012 18.7 0.1 1.6 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.6 CTQ27004.1 - 0.0018 18.1 0.1 0.0044 16.9 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain KORA PF16509.5 CTQ27004.1 - 0.0027 18.0 0.2 0.0052 17.0 0.2 1.5 1 1 0 1 1 1 1 TrfB plasmid transcriptional repressor HTH_Crp_2 PF13545.6 CTQ27004.1 - 0.0038 17.2 0.1 0.64 10.0 0.0 2.3 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain P22_Cro PF14549.6 CTQ27004.1 - 0.0059 16.4 0.9 0.018 14.9 0.1 2.1 2 1 1 3 3 3 1 DNA-binding transcriptional regulator Cro HTH_10 PF04967.12 CTQ27004.1 - 0.0089 15.8 0.1 0.052 13.3 0.0 2.0 2 0 0 2 2 2 1 HTH DNA binding domain Sigma70_ECF PF07638.11 CTQ27004.1 - 0.014 15.3 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 ECF sigma factor MarR_2 PF12802.7 CTQ27004.1 - 0.014 15.2 0.0 0.027 14.3 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_1 PF00126.27 CTQ27004.1 - 0.015 15.3 0.2 0.026 14.5 0.2 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Tnp_ISL3 PF13542.6 CTQ27004.1 - 0.018 14.4 0.1 0.037 13.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Phage_CII PF05269.11 CTQ27004.1 - 0.041 14.1 0.2 11 6.3 0.1 2.6 2 1 1 3 3 3 0 Bacteriophage CII protein GerE PF00196.19 CTQ27004.1 - 0.043 13.4 0.0 0.091 12.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Pou PF00157.17 CTQ27004.1 - 0.05 13.6 0.4 0.4 10.7 0.2 2.3 1 1 1 2 2 2 0 Pou domain - N-terminal to homeobox domain HTH_50 PF18024.1 CTQ27004.1 - 0.065 12.9 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HNF-1_N PF04814.13 CTQ27004.1 - 0.07 13.7 0.0 0.1 13.2 0.0 1.3 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus HTH_AsnC-type PF13404.6 CTQ27004.1 - 0.071 13.0 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain MRP-L20 PF12824.7 CTQ27004.1 - 0.073 13.2 0.0 0.097 12.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 HTH_38 PF13936.6 CTQ27004.1 - 0.078 12.8 0.0 0.24 11.2 0.0 1.8 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_5 PF01022.20 CTQ27004.1 - 0.11 12.4 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Cro PF09048.10 CTQ27004.1 - 0.11 12.5 0.4 0.84 9.7 0.1 2.1 1 1 1 2 2 2 0 Cro Phage_CI_repr PF07022.13 CTQ27004.1 - 0.12 12.5 0.0 0.4 10.8 0.0 1.7 1 1 1 2 2 2 0 Bacteriophage CI repressor helix-turn-helix domain LacI PF00356.21 CTQ27004.1 - 0.14 12.0 0.1 0.6 9.9 0.1 1.9 1 1 1 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_IclR PF09339.10 CTQ27004.1 - 0.15 11.9 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain ParE_toxin PF05016.15 CTQ27005.1 - 6.5e-07 29.9 0.0 9.2e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE adh_short_C2 PF13561.6 CTQ27007.1 - 1.1e-60 205.1 7.0 1.2e-60 205.0 7.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27007.1 - 1.5e-53 181.2 2.2 1.8e-53 180.9 2.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ27007.1 - 5.1e-13 49.3 4.0 7.7e-13 48.7 4.0 1.2 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 CTQ27007.1 - 3.5e-05 23.2 0.1 0.00031 20.1 0.0 2.1 1 1 1 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF1776 PF08643.10 CTQ27007.1 - 5.8e-05 22.6 0.0 0.00018 21.0 0.0 1.7 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) Epimerase PF01370.21 CTQ27007.1 - 0.00024 20.7 0.8 0.0008 18.9 0.8 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 CTQ27007.1 - 0.0054 17.3 2.6 0.0065 17.0 0.9 2.0 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent Eno-Rase_NADH_b PF12242.8 CTQ27007.1 - 0.011 15.4 0.1 0.025 14.3 0.1 1.6 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FAM25 PF15825.5 CTQ27007.1 - 0.063 13.6 0.9 0.15 12.4 0.9 1.7 1 0 0 1 1 1 0 FAM25 family 3HCDH_N PF02737.18 CTQ27007.1 - 0.068 13.1 1.4 0.12 12.2 0.5 1.8 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Fe-ADH PF00465.19 CTQ27008.1 - 7.3e-46 156.6 0.3 8.5e-46 156.4 0.3 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ27008.1 - 2.2e-15 57.0 0.0 3.1e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 CTQ27008.1 - 0.002 17.3 2.2 1 8.4 0.0 2.4 2 0 0 2 2 2 2 3-dehydroquinate synthase GlutR_N PF05201.15 CTQ27008.1 - 0.083 12.6 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, N-terminal domain ABC_tran PF00005.27 CTQ27009.1 - 3.2e-43 147.5 0.0 3.5e-22 79.4 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ27009.1 - 4.4e-06 26.7 1.0 0.071 12.9 0.0 3.7 3 1 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ27009.1 - 5.3e-06 26.1 0.4 9.7e-05 22.0 0.1 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain SMC_N PF02463.19 CTQ27009.1 - 6.9e-06 25.6 0.7 0.27 10.7 0.0 3.2 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ27009.1 - 1e-05 25.5 1.2 0.012 15.6 0.1 2.6 3 0 0 3 3 3 2 RsgA GTPase MMR_HSR1 PF01926.23 CTQ27009.1 - 3.1e-05 24.0 0.1 0.042 13.9 0.0 2.4 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_22 PF13401.6 CTQ27009.1 - 3.1e-05 24.3 3.6 0.42 10.9 2.3 3.3 2 1 0 2 2 2 2 AAA domain AAA_30 PF13604.6 CTQ27009.1 - 4.7e-05 23.2 3.5 0.017 14.9 0.5 3.3 3 1 0 3 3 3 2 AAA domain AAA_23 PF13476.6 CTQ27009.1 - 7.5e-05 23.3 0.1 0.00072 20.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 CTQ27009.1 - 0.00029 21.4 0.8 0.16 12.6 0.0 2.7 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 CTQ27009.1 - 0.002 18.5 2.6 2.1 8.7 0.7 2.8 2 1 0 2 2 2 2 AAA ATPase domain cobW PF02492.19 CTQ27009.1 - 0.002 17.7 0.4 0.37 10.4 0.0 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.6 CTQ27009.1 - 0.0024 17.5 1.1 0.05 13.2 0.6 2.5 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 CTQ27009.1 - 0.0079 16.4 1.3 0.68 10.1 0.1 2.8 2 1 0 2 2 2 1 AAA domain TsaE PF02367.17 CTQ27009.1 - 0.012 15.6 1.3 3 7.9 0.1 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 CTQ27009.1 - 0.017 14.4 0.6 2.2 7.5 0.1 2.4 2 0 0 2 2 2 0 Zeta toxin MeaB PF03308.16 CTQ27009.1 - 0.023 13.7 0.3 4.6 6.1 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 CTQ27009.1 - 0.026 14.4 0.2 1.9 8.4 0.0 2.7 2 0 0 2 2 2 0 NACHT domain MukB PF04310.12 CTQ27009.1 - 0.036 13.9 0.2 0.067 13.0 0.2 1.3 1 0 0 1 1 1 0 MukB N-terminal NB-ARC PF00931.22 CTQ27009.1 - 0.046 12.9 0.2 5.1 6.2 0.0 2.4 2 0 0 2 2 2 0 NB-ARC domain PduV-EutP PF10662.9 CTQ27009.1 - 0.046 13.5 0.1 4.2 7.1 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_27 PF13514.6 CTQ27009.1 - 0.064 12.8 0.1 0.15 11.7 0.1 1.5 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 CTQ27009.1 - 0.087 13.1 0.9 0.89 9.8 0.0 2.7 3 0 0 3 3 3 0 Putative exonuclease SbcCD, C subunit DnaB_C PF03796.15 CTQ27009.1 - 0.096 12.0 0.4 1.5 8.1 0.1 2.5 2 1 1 3 3 3 0 DnaB-like helicase C terminal domain AAA_14 PF13173.6 CTQ27009.1 - 0.11 12.5 0.2 15 5.6 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_28 PF13521.6 CTQ27009.1 - 0.11 12.7 2.1 1.3 9.2 0.1 2.8 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 CTQ27009.1 - 0.2 12.1 0.0 5.6 7.4 0.0 2.3 2 0 0 2 2 2 0 RNA helicase Viral_helicase1 PF01443.18 CTQ27009.1 - 0.24 11.1 0.3 11 5.7 0.0 3.0 4 0 0 4 4 4 0 Viral (Superfamily 1) RNA helicase ATP_bind_1 PF03029.17 CTQ27009.1 - 0.29 10.9 0.9 7.1 6.3 0.1 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein BPD_transp_2 PF02653.16 CTQ27010.1 - 7.6e-36 123.6 43.2 7.6e-36 123.6 43.2 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Peripla_BP_4 PF13407.6 CTQ27011.1 - 1.3e-28 100.3 5.5 1.7e-28 99.9 5.5 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ27011.1 - 1.8e-08 34.1 0.0 2.7e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ27011.1 - 3.1e-08 34.1 0.0 2.7e-06 27.8 0.0 2.2 2 0 0 2 2 2 1 Periplasmic binding protein-like domain YcaO PF02624.16 CTQ27011.1 - 0.17 11.1 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 YcaO cyclodehydratase, ATP-ad Mg2+-binding LVIVD PF08309.11 CTQ27012.1 - 2.4e-07 30.0 0.0 0.72 9.2 0.0 4.9 4 0 0 4 4 4 3 LVIVD repeat SBP56 PF05694.11 CTQ27012.1 - 0.0051 15.7 0.1 21 3.8 0.0 4.2 2 1 2 4 4 4 2 56kDa selenium binding protein (SBP56) Beta_propel PF09826.9 CTQ27012.1 - 0.0059 15.5 0.0 3.5 6.4 0.0 3.7 5 1 0 5 5 5 2 Beta propeller domain APH PF01636.23 CTQ27013.1 - 2.4e-09 37.5 4.1 3.8e-09 36.8 4.1 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family APH_6_hur PF04655.14 CTQ27013.1 - 0.018 14.4 0.2 0.13 11.6 0.1 2.3 2 1 0 2 2 2 0 Aminoglycoside/hydroxyurea antibiotic resistance kinase IF-2B PF01008.17 CTQ27014.1 - 3e-68 230.1 0.0 3.6e-68 229.8 0.0 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family PIN PF01850.21 CTQ27014.1 - 0.1 13.1 0.1 0.56 10.7 0.1 2.0 2 0 0 2 2 2 0 PIN domain His_Phos_2 PF00328.22 CTQ27015.1 - 6.4e-37 127.8 0.0 1.4e-36 126.7 0.0 1.5 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) His_Phos_1 PF00300.22 CTQ27015.1 - 0.052 13.2 0.0 0.79 9.4 0.0 2.5 2 0 0 2 2 2 0 Histidine phosphatase superfamily (branch 1) HalOD2 PF18547.1 CTQ27015.1 - 0.64 10.0 3.8 11 6.0 0.7 2.6 1 1 1 2 2 2 0 Halobacterial output domain 2 MFS_1 PF07690.16 CTQ27016.1 - 6e-38 130.7 40.0 6e-38 130.7 40.0 1.8 2 0 0 2 2 2 1 Major Facilitator Superfamily OATP PF03137.20 CTQ27016.1 - 0.0011 17.4 0.2 0.0011 17.4 0.2 3.3 2 1 1 3 3 3 2 Organic Anion Transporter Polypeptide (OATP) family BatA PF07584.11 CTQ27016.1 - 0.0066 16.8 0.0 0.019 15.3 0.0 1.8 1 0 0 1 1 1 1 Aerotolerance regulator N-terminal ARL6IP6 PF15062.6 CTQ27016.1 - 0.082 13.0 0.0 0.39 10.9 0.0 2.1 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix Inositol_P PF00459.25 CTQ27017.1 - 1.5e-48 165.7 0.0 1.7e-48 165.5 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family Peripla_BP_3 PF13377.6 CTQ27018.1 - 4.2e-16 59.7 0.3 9.6e-16 58.5 0.2 1.7 2 0 0 2 2 2 1 Periplasmic binding protein-like domain LacI PF00356.21 CTQ27018.1 - 1.7e-13 50.1 0.6 3.2e-13 49.2 0.6 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_1 PF00532.21 CTQ27018.1 - 1.7e-12 47.3 0.0 2.6e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family HTH_31 PF13560.6 CTQ27018.1 - 0.00072 19.9 0.2 0.0015 18.8 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Amidohydro_3 PF07969.11 CTQ27019.1 - 2.9e-43 149.0 0.0 1.5e-34 120.3 0.0 2.0 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 CTQ27019.1 - 1.7e-10 40.8 0.0 2.5e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 Amidohydrolase family PucR PF07905.11 CTQ27020.1 - 9.4e-28 96.8 0.1 2.2e-27 95.6 0.1 1.7 1 0 0 1 1 1 1 Purine catabolism regulatory protein-like family HTH_30 PF13556.6 CTQ27020.1 - 7.9e-19 67.2 0.5 1.9e-18 66.0 0.5 1.7 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain GGDEF_2 PF17853.1 CTQ27020.1 - 2e-12 47.4 2.3 3.7e-12 46.5 0.6 2.3 3 0 0 3 3 3 1 GGDEF-like domain HTH_8 PF02954.19 CTQ27020.1 - 5.9e-07 29.2 0.3 2.3e-06 27.3 0.3 2.0 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_1 PF00126.27 CTQ27020.1 - 1.8e-05 24.6 0.2 0.00014 21.7 0.0 2.5 3 0 0 3 3 3 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_23 PF13384.6 CTQ27020.1 - 0.029 14.2 0.2 0.42 10.5 0.0 2.9 3 0 0 3 3 3 0 Homeodomain-like domain TPR_12 PF13424.6 CTQ27020.1 - 0.043 14.1 3.5 3.7 7.9 0.4 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat HTH_11 PF08279.12 CTQ27020.1 - 0.092 12.7 0.0 0.41 10.6 0.0 2.2 1 0 0 1 1 1 0 HTH domain Transp_cyt_pur PF02133.15 CTQ27021.1 - 4.5e-12 45.5 43.6 6.4e-12 45.0 43.6 1.2 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin Aldolase_II PF00596.21 CTQ27022.1 - 4e-40 137.7 0.0 4.5e-40 137.6 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain RuBisCO_large PF00016.20 CTQ27022.1 - 0.089 12.0 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, catalytic domain FGGY_N PF00370.21 CTQ27023.1 - 5.5e-53 180.0 0.0 8.4e-53 179.4 0.0 1.3 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 CTQ27023.1 - 5.8e-29 101.2 0.7 8.7e-29 100.7 0.7 1.3 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 CTQ27023.1 - 0.17 11.3 0.0 0.27 10.7 0.0 1.4 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family 2-Hacid_dh_C PF02826.19 CTQ27024.1 - 1.5e-56 190.6 0.0 4.1e-55 185.9 0.0 2.2 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 CTQ27024.1 - 7e-19 67.8 0.0 8.8e-19 67.5 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 CTQ27024.1 - 1.4e-06 28.6 0.0 3.3e-06 27.4 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 CTQ27024.1 - 0.00015 21.9 0.0 0.00034 20.7 0.0 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IlvN PF07991.12 CTQ27024.1 - 0.0026 17.3 0.0 0.0066 16.0 0.0 1.7 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain XdhC_C PF13478.6 CTQ27024.1 - 0.01 16.3 0.6 0.038 14.5 0.0 2.3 3 1 0 3 3 3 0 XdhC Rossmann domain NAD_binding_7 PF13241.6 CTQ27024.1 - 0.03 14.8 0.1 0.18 12.3 0.0 2.1 2 0 0 2 2 2 0 Putative NAD(P)-binding Ldh_1_N PF00056.23 CTQ27024.1 - 0.44 10.6 1.9 8.7 6.4 0.1 3.0 3 1 0 3 3 3 0 lactate/malate dehydrogenase, NAD binding domain PfkB PF00294.24 CTQ27025.1 - 3e-44 151.5 0.0 3.6e-44 151.3 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 CTQ27025.1 - 0.0017 17.8 0.0 0.0029 17.0 0.0 1.4 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase BPD_transp_2 PF02653.16 CTQ27026.1 - 7.2e-35 120.4 35.6 7.2e-35 120.4 35.6 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 CTQ27027.1 - 2.8e-27 95.6 33.3 4.4e-27 94.9 33.3 1.3 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 CTQ27028.1 - 1.5e-45 155.1 0.0 7.4e-26 91.3 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ27028.1 - 4.7e-11 43.1 0.6 0.00028 20.8 0.1 3.1 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ27028.1 - 0.00066 19.4 0.1 0.0055 16.4 0.0 2.3 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ27028.1 - 0.005 16.8 0.0 0.062 13.2 0.1 2.4 3 0 0 3 3 3 1 RsgA GTPase AAA_23 PF13476.6 CTQ27028.1 - 0.062 13.8 0.1 0.097 13.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ27028.1 - 0.13 11.9 0.1 0.26 11.0 0.1 1.5 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 CTQ27028.1 - 0.14 11.6 0.0 3.2 7.1 0.0 2.5 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 CTQ27028.1 - 0.14 11.8 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_16 PF13191.6 CTQ27028.1 - 0.16 12.3 2.3 5.3 7.4 2.4 2.5 1 1 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 CTQ27028.1 - 0.28 11.2 0.3 1.5 8.9 0.1 2.0 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Peripla_BP_4 PF13407.6 CTQ27029.1 - 1.6e-45 155.7 0.2 1.9e-45 155.4 0.2 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ27029.1 - 8.8e-12 45.0 0.0 1.5e-11 44.3 0.0 1.3 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ27029.1 - 2.9e-08 34.2 0.0 1.9e-07 31.6 0.0 2.0 1 1 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_6 PF13458.6 CTQ27029.1 - 4.9e-07 29.7 2.5 0.00017 21.4 0.1 2.9 2 1 1 3 3 3 3 Periplasmic binding protein Molybdopterin PF00384.22 CTQ27030.1 - 3e-62 211.0 0.0 3.7e-62 210.7 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ27030.1 - 1.1e-26 93.1 0.0 3.2e-26 91.5 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Molybdopterin_N PF18364.1 CTQ27030.1 - 5.9e-09 35.8 0.4 1.4e-08 34.6 0.4 1.7 1 0 0 1 1 1 1 Molybdopterin oxidoreductase N-terminal domain ARD PF03079.14 CTQ27031.1 - 1.1e-34 119.9 0.0 1.3e-34 119.6 0.0 1.0 1 0 0 1 1 1 1 ARD/ARD' family Cupin_2 PF07883.11 CTQ27031.1 - 1.7e-05 24.5 0.1 2.8e-05 23.7 0.1 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 CTQ27031.1 - 0.036 13.7 0.0 0.049 13.2 0.0 1.3 1 0 0 1 1 1 0 Cupin AraC_binding PF02311.19 CTQ27031.1 - 0.059 13.3 0.1 0.083 12.8 0.1 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain Hydrolase PF00702.26 CTQ27032.1 - 5e-07 30.2 0.0 6.8e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CTQ27032.1 - 0.0026 17.9 0.0 0.0054 16.8 0.0 1.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Aminotran_1_2 PF00155.21 CTQ27033.1 - 1.6e-56 192.1 0.0 1.8e-56 191.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 CTQ27033.1 - 5.4e-06 25.2 0.0 7.5e-06 24.7 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 CTQ27033.1 - 8.1e-06 25.0 0.0 1.2e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 CTQ27033.1 - 0.0062 15.9 0.0 0.012 14.9 0.0 1.4 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family ParBc PF02195.18 CTQ27034.1 - 2e-12 47.2 0.0 4.9e-12 46.0 0.0 1.7 1 1 0 1 1 1 1 ParB-like nuclease domain DUF3440 PF11922.8 CTQ27035.1 - 4.5e-37 127.5 0.3 1.4e-26 93.3 0.1 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF3440) PAPS_reduct PF01507.19 CTQ27035.1 - 2.7e-18 66.6 0.0 2e-17 63.8 0.0 2.1 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.20 CTQ27035.1 - 5.9e-05 22.9 0.0 0.00013 21.8 0.0 1.6 1 0 0 1 1 1 1 PP-loop family Phage_int_SAM_4 PF13495.6 CTQ27035.1 - 0.0066 16.9 0.1 0.03 14.8 0.0 2.1 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain QueC PF06508.13 CTQ27035.1 - 0.059 12.9 0.0 0.1 12.1 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC HTH_1 PF00126.27 CTQ27036.1 - 1.7e-18 66.3 0.0 3.5e-18 65.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 CTQ27036.1 - 8.2e-14 51.5 0.0 1.3e-13 50.8 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 CTQ27036.1 - 0.033 14.0 0.0 0.11 12.3 0.0 1.9 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain MarR_2 PF12802.7 CTQ27036.1 - 0.044 13.7 0.1 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 CTQ27036.1 - 0.17 12.1 0.0 0.67 10.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain Thioredoxin_2 PF13098.6 CTQ27037.1 - 2.3e-16 60.2 0.0 4.2e-16 59.4 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_4 PF13462.6 CTQ27037.1 - 2.4e-06 27.8 0.0 9.3e-06 25.9 0.0 1.7 1 1 1 2 2 2 1 Thioredoxin TraF PF13728.6 CTQ27037.1 - 0.035 13.9 0.2 6.5 6.5 0.0 2.2 2 0 0 2 2 2 0 F plasmid transfer operon protein DsbC_N PF10411.9 CTQ27037.1 - 0.068 12.6 0.2 0.16 11.4 0.2 1.6 1 0 0 1 1 1 0 Disulfide bond isomerase protein N-terminus DSBA PF01323.20 CTQ27037.1 - 0.07 12.9 0.1 0.45 10.3 0.0 2.0 2 0 0 2 2 2 0 DSBA-like thioredoxin domain Thioredoxin PF00085.20 CTQ27037.1 - 0.091 12.8 0.4 6.4 6.8 0.0 2.3 2 0 0 2 2 2 0 Thioredoxin AhpC-TSA PF00578.21 CTQ27037.1 - 0.11 12.4 0.0 0.21 11.5 0.0 1.6 1 1 0 1 1 1 0 AhpC/TSA family FliG_M PF14841.6 CTQ27037.1 - 0.14 12.4 0.0 0.27 11.5 0.0 1.5 1 0 0 1 1 1 0 FliG middle domain AhpC-TSA PF00578.21 CTQ27038.1 - 1.1e-32 112.6 0.1 1.3e-32 112.3 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 CTQ27038.1 - 5.2e-12 45.7 0.0 6.5e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 CTQ27038.1 - 1e-06 28.5 0.1 1.9e-06 27.6 0.1 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 CTQ27038.1 - 4.1e-05 23.5 0.0 0.00027 20.9 0.0 2.1 2 0 0 2 2 2 1 SCO1/SenC DUF3986 PF13143.6 CTQ27038.1 - 0.069 14.1 0.2 0.11 13.5 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3986) Pyr_redox_2 PF07992.14 CTQ27039.1 - 7.4e-44 150.1 6.6 1.2e-43 149.4 6.6 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ27039.1 - 5.7e-22 78.3 1.1 1.5e-20 73.7 1.0 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ27039.1 - 2.8e-16 59.9 4.0 1e-14 54.8 0.5 3.2 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ27039.1 - 2e-09 37.1 8.1 0.0055 15.8 0.4 3.6 3 1 1 4 4 4 3 Glucose inhibited division protein A Thioredoxin_3 PF13192.6 CTQ27039.1 - 7.3e-09 35.6 0.0 2.4e-08 33.9 0.0 2.0 1 0 0 1 1 1 1 Thioredoxin domain FAD_binding_2 PF00890.24 CTQ27039.1 - 1.3e-05 24.5 16.8 0.082 12.0 1.1 4.6 2 2 3 5 5 5 3 FAD binding domain HI0933_like PF03486.14 CTQ27039.1 - 1.6e-05 23.8 7.6 0.12 11.0 0.3 3.4 3 0 0 3 3 3 3 HI0933-like protein FAD_oxidored PF12831.7 CTQ27039.1 - 4.2e-05 23.1 14.8 0.00025 20.6 1.6 3.4 2 2 1 3 3 3 2 FAD dependent oxidoreductase Thi4 PF01946.17 CTQ27039.1 - 0.0003 20.1 0.9 0.0062 15.8 0.1 2.3 2 0 0 2 2 2 1 Thi4 family K_oxygenase PF13434.6 CTQ27039.1 - 0.00047 19.4 1.9 0.026 13.7 0.1 2.7 2 1 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 CTQ27039.1 - 0.00088 18.6 3.4 0.0085 15.4 0.5 2.3 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 CTQ27039.1 - 0.00092 19.4 2.5 0.02 15.1 0.2 3.2 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain Glutaredoxin PF00462.24 CTQ27039.1 - 0.0074 16.5 3.5 0.089 13.0 0.0 3.3 3 0 0 3 3 3 1 Glutaredoxin DAO PF01266.24 CTQ27039.1 - 0.011 15.3 15.7 1 8.9 0.5 3.9 4 1 1 5 5 5 0 FAD dependent oxidoreductase FMO-like PF00743.19 CTQ27039.1 - 0.013 14.0 0.0 0.032 12.7 0.0 1.6 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like AlaDh_PNT_C PF01262.21 CTQ27039.1 - 0.013 14.8 0.9 0.14 11.5 0.1 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_9 PF13454.6 CTQ27039.1 - 0.019 15.0 4.7 0.36 10.8 0.1 3.4 3 0 0 3 3 3 0 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 CTQ27039.1 - 0.13 11.3 2.5 16 4.4 0.1 3.0 3 0 0 3 3 3 0 Lycopene cyclase protein NAD_binding_7 PF13241.6 CTQ27039.1 - 0.47 10.9 2.7 1.3 9.5 0.1 2.7 3 1 0 3 3 2 0 Putative NAD(P)-binding Trp_halogenase PF04820.14 CTQ27039.1 - 1.2 7.9 3.4 15 4.3 0.1 2.9 3 0 0 3 3 3 0 Tryptophan halogenase Usp PF00582.26 CTQ27040.1 - 2.1e-26 93.1 0.1 2.4e-26 93.0 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family Fe_dep_repr_C PF02742.15 CTQ27040.1 - 0.089 12.9 0.1 0.34 11.0 0.1 1.9 2 0 0 2 2 2 0 Iron dependent repressor, metal binding and dimerisation domain DNA_photolyase PF00875.18 CTQ27040.1 - 0.094 12.7 0.1 0.14 12.1 0.1 1.5 1 1 0 1 1 1 0 DNA photolyase GreA_GreB PF01272.19 CTQ27041.1 - 7e-20 70.7 0.0 2e-19 69.2 0.0 1.6 2 0 0 2 2 2 1 Transcription elongation factor, GreA/GreB, C-term Rnk_N PF14760.6 CTQ27041.1 - 1.9e-13 50.7 3.1 3.5e-13 49.8 3.1 1.5 1 0 0 1 1 1 1 Rnk N-terminus Ribonuclease_T2 PF00445.18 CTQ27042.1 - 4e-13 50.0 0.0 5.5e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease T2 family PagP PF07017.11 CTQ27045.1 - 1.8e-67 225.3 3.0 2.1e-67 225.1 3.0 1.0 1 0 0 1 1 1 1 Antimicrobial peptide resistance and lipid A acylation protein PagP CSD PF00313.22 CTQ27046.1 - 1.1e-33 114.8 0.5 1.2e-33 114.7 0.5 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 CTQ27046.1 - 1.3e-05 24.7 0.3 2.9e-05 23.7 0.3 1.6 1 1 0 1 1 1 1 Ribonuclease B OB domain CusF_Ec PF11604.8 CTQ27046.1 - 0.095 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Copper binding periplasmic protein CusF S1 PF00575.23 CTQ27046.1 - 0.11 12.9 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 S1 RNA binding domain CRCB PF02537.15 CTQ27047.1 - 9.8e-24 83.5 10.1 1.3e-23 83.2 10.1 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) DUF5500 PF17604.2 CTQ27047.1 - 0.16 12.0 0.0 0.24 11.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5500) CN_hydrolase PF00795.22 CTQ27048.1 - 2.6e-36 125.3 0.0 2.9e-36 125.2 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase MttA_Hcf106 PF02416.16 CTQ27049.1 - 5e-14 51.4 0.2 5.7e-14 51.2 0.2 1.1 1 0 0 1 1 1 1 mttA/Hcf106 family Radical_SAM PF04055.21 CTQ27050.1 - 2.4e-14 54.1 0.0 4e-14 53.3 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily LIAS_N PF16881.5 CTQ27050.1 - 1.5e-07 31.8 0.0 9.9e-07 29.2 0.1 2.0 2 0 0 2 2 2 1 N-terminal domain of lipoyl synthase of Radical_SAM family LysR_substrate PF03466.20 CTQ27051.1 - 1.4e-15 57.3 0.9 1.8e-15 56.9 0.9 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27051.1 - 2.7e-15 56.0 0.0 6.5e-15 54.8 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Mga PF08280.11 CTQ27051.1 - 0.0037 17.2 0.0 0.011 15.8 0.0 1.7 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain Cro PF09048.10 CTQ27051.1 - 0.026 14.6 0.0 0.051 13.6 0.0 1.5 1 0 0 1 1 1 0 Cro HTH_5 PF01022.20 CTQ27051.1 - 0.1 12.5 0.0 0.27 11.1 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.19 CTQ27051.1 - 0.12 12.6 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain BPL_LplA_LipB PF03099.19 CTQ27052.1 - 5.7e-07 29.5 0.0 8.9e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family DUF493 PF04359.14 CTQ27053.1 - 1.3e-28 99.3 0.0 1.5e-28 99.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF493) HisG_C PF08029.11 CTQ27053.1 - 0.034 14.3 0.1 0.04 14.1 0.1 1.2 1 0 0 1 1 1 0 HisG, C-terminal domain Peptidase_S11 PF00768.20 CTQ27054.1 - 5.4e-102 340.3 0.1 7.3e-102 339.9 0.1 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase PBP5_C PF07943.13 CTQ27054.1 - 1.6e-24 86.0 0.0 2.7e-24 85.2 0.0 1.4 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain Beta-lactamase2 PF13354.6 CTQ27054.1 - 2.6e-06 27.2 0.0 4.1e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 CTQ27054.1 - 0.021 14.1 0.0 0.17 11.1 0.0 2.0 1 1 0 2 2 2 0 Beta-lactamase DPBB_1 PF03330.18 CTQ27055.1 - 1.7e-19 69.9 0.0 5e-19 68.4 0.0 1.8 1 0 0 1 1 1 1 Lytic transglycolase SPOR PF05036.13 CTQ27055.1 - 1.8e-14 53.8 3.7 5.1e-14 52.4 3.7 1.8 1 0 0 1 1 1 1 Sporulation related domain FTSW_RODA_SPOVE PF01098.19 CTQ27056.1 - 6.9e-125 416.8 29.9 8.4e-125 416.5 29.9 1.0 1 0 0 1 1 1 1 Cell cycle protein Transpeptidase PF00905.22 CTQ27057.1 - 5.7e-92 308.2 0.1 7.7e-92 307.7 0.1 1.2 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 CTQ27057.1 - 1.5e-45 155.8 0.5 2.3e-45 155.1 0.5 1.3 1 0 0 1 1 1 1 Penicillin-binding Protein dimerisation domain SPOUT_MTase PF02590.17 CTQ27058.1 - 9.6e-47 158.8 0.0 1.1e-46 158.7 0.0 1.0 1 0 0 1 1 1 1 Predicted SPOUT methyltransferase RsfS PF02410.15 CTQ27059.1 - 1.9e-29 102.0 0.2 2.2e-29 101.8 0.2 1.0 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation His_Phos_1 PF00300.22 CTQ27060.1 - 2.1e-52 177.7 0.3 2.3e-52 177.5 0.3 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) CTP_transf_like PF01467.26 CTQ27061.1 - 1.2e-37 129.2 0.0 1.5e-37 129.0 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like HTH_32 PF13565.6 CTQ27061.1 - 6.1 7.5 7.3 69 4.2 3.6 3.0 2 2 0 2 2 2 0 Homeodomain-like domain DNA_pol3_delt_C PF14840.6 CTQ27062.1 - 6.1e-74 246.3 7.4 1.5e-73 245.0 7.4 1.7 1 0 0 1 1 1 1 Processivity clamp loader gamma complex DNA pol III C-term DNA_pol3_delta PF06144.13 CTQ27062.1 - 1.7e-45 154.9 0.1 3.2e-45 154.0 0.1 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit BET PF17035.5 CTQ27062.1 - 0.071 13.3 0.0 0.18 12.0 0.0 1.6 1 0 0 1 1 1 0 Bromodomain extra-terminal - transcription regulation HTH_18 PF12833.7 CTQ27062.1 - 0.29 11.4 2.7 5.4 7.4 0.0 3.4 3 0 0 3 3 3 0 Helix-turn-helix domain LptE PF04390.12 CTQ27063.1 - 8.1e-15 55.4 0.1 1.2e-14 54.9 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide-assembly tRNA-synt_1_2 PF13603.6 CTQ27064.1 - 2.9e-77 258.4 0.0 5.1e-77 257.6 0.0 1.4 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1 PF00133.22 CTQ27064.1 - 7.9e-70 235.8 8.3 1.8e-25 89.3 0.2 6.1 2 1 3 5 5 5 5 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 CTQ27064.1 - 1.7e-32 112.7 0.1 4.3e-23 81.7 0.0 3.9 3 1 1 4 4 4 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 CTQ27064.1 - 6.7e-16 58.6 0.0 1.2e-15 57.8 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 CTQ27064.1 - 0.00023 20.6 0.0 0.57 9.5 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 CTQ27064.1 - 0.00034 19.7 0.0 0.37 9.6 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) Glyco_hydro_15 PF00723.21 CTQ27064.1 - 0.014 14.2 0.1 0.023 13.5 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 15 DUF1451 PF07295.11 CTQ27065.1 - 4e-56 189.1 0.2 4.6e-56 188.9 0.2 1.0 1 0 0 1 1 1 1 Zinc-ribbon containing domain HypA PF01155.19 CTQ27065.1 - 0.035 14.1 0.5 0.08 13.0 0.2 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PhnA_Zn_Ribbon PF08274.12 CTQ27065.1 - 0.036 14.0 2.3 4.7 7.2 0.1 2.4 2 0 0 2 2 2 0 PhnA Zinc-Ribbon T4_Rnl2_C PF18043.1 CTQ27065.1 - 0.044 13.9 0.6 0.082 13.1 0.4 1.6 1 1 0 1 1 1 0 T4 RNA ligase 2 C-terminal TniQ PF06527.11 CTQ27065.1 - 0.046 14.5 0.4 0.097 13.4 0.4 1.5 1 1 0 1 1 1 0 TniQ Apolipoprotein PF01442.18 CTQ27065.1 - 0.05 13.5 3.8 0.085 12.7 3.8 1.4 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Zn-ribbon_8 PF09723.10 CTQ27065.1 - 0.052 13.7 1.2 0.12 12.5 1.2 1.6 1 0 0 1 1 1 0 Zinc ribbon domain ParB PF08775.10 CTQ27065.1 - 0.06 13.8 0.7 0.19 12.2 0.5 1.8 1 1 1 2 2 2 0 ParB family PXA PF02194.15 CTQ27065.1 - 0.065 13.2 0.1 0.073 13.0 0.1 1.1 1 0 0 1 1 1 0 PXA domain zinc_ribbon_10 PF10058.9 CTQ27065.1 - 0.073 12.8 1.8 0.18 11.5 1.8 1.7 1 1 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein zinc_ribbon_2 PF13240.6 CTQ27065.1 - 0.09 12.5 1.6 1.5 8.6 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 CTQ27065.1 - 0.23 11.0 2.4 6.9 6.3 0.2 2.6 2 0 0 2 2 2 0 TFIIB zinc-binding DUF2072 PF09845.9 CTQ27065.1 - 0.53 10.6 2.1 1 9.7 0.2 2.0 2 0 0 2 2 2 0 Zn-ribbon containing protein ADK_lid PF05191.14 CTQ27065.1 - 0.55 10.3 3.3 1.2 9.2 3.3 1.5 1 0 0 1 1 1 0 Adenylate kinase, active site lid TFIIS_C PF01096.18 CTQ27065.1 - 7 6.6 6.3 12 5.8 0.5 2.6 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) Haemagg_act PF05860.13 CTQ27066.1 - 4.3e-30 104.1 7.1 4.3e-30 104.1 7.1 4.5 5 0 0 5 5 5 1 haemagglutination activity domain ShlB PF03865.13 CTQ27067.1 - 1.7e-91 306.9 14.7 2.2e-91 306.5 14.7 1.2 1 0 0 1 1 1 1 Haemolysin secretion/activation protein ShlB/FhaC/HecB POTRA_3 PF17287.2 CTQ27067.1 - 2.4e-15 55.7 0.0 6.3e-15 54.4 0.0 1.7 2 0 0 2 2 2 1 POTRA domain POTRA_2 PF08479.11 CTQ27067.1 - 1.2e-13 50.7 0.7 2.5e-13 49.7 0.1 1.9 2 0 0 2 2 2 1 POTRA domain, ShlB-type ABC_tran PF00005.27 CTQ27068.1 - 3.4e-33 115.0 0.0 4.7e-33 114.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ27068.1 - 5.3e-09 36.3 0.1 0.00073 19.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ27068.1 - 2.5e-07 30.4 0.5 1.1e-06 28.2 0.5 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ27068.1 - 6.5e-05 23.2 0.3 0.00016 21.9 0.3 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ27068.1 - 9.8e-05 22.3 0.1 0.00021 21.3 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 CTQ27068.1 - 0.00025 20.7 0.1 0.00051 19.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 CTQ27068.1 - 0.0004 20.4 0.0 0.00052 20.0 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_33 PF13671.6 CTQ27068.1 - 0.00042 20.5 0.3 0.00072 19.7 0.3 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ27068.1 - 0.00071 20.0 0.1 0.0011 19.4 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 CTQ27068.1 - 0.0033 16.3 1.2 2.7 6.7 0.1 3.0 2 1 0 2 2 2 2 Predicted ATPase of the ABC class DLIC PF05783.11 CTQ27068.1 - 0.01 14.7 0.1 0.015 14.2 0.1 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) TK PF00265.18 CTQ27068.1 - 0.011 15.7 0.1 0.38 10.6 0.0 2.3 2 0 0 2 2 2 0 Thymidine kinase AAA_15 PF13175.6 CTQ27068.1 - 0.012 15.3 0.1 1.9 8.1 0.1 2.1 1 1 0 2 2 2 0 AAA ATPase domain ATPase_2 PF01637.18 CTQ27068.1 - 0.014 15.3 0.3 0.05 13.5 0.1 1.9 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 CTQ27068.1 - 0.017 14.9 0.0 0.03 14.0 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein ATPase PF06745.13 CTQ27068.1 - 0.018 14.4 0.1 0.036 13.4 0.0 1.5 2 0 0 2 2 2 0 KaiC AAA_13 PF13166.6 CTQ27068.1 - 0.019 13.7 0.0 0.24 10.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 CTQ27068.1 - 0.02 14.8 0.4 0.039 13.9 0.4 1.5 1 0 0 1 1 1 0 NTPase cobW PF02492.19 CTQ27068.1 - 0.02 14.5 0.8 0.043 13.4 0.1 1.9 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 CTQ27068.1 - 0.021 15.4 0.3 0.038 14.5 0.3 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ27068.1 - 0.025 14.3 0.3 0.025 14.3 0.3 1.9 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 CTQ27068.1 - 0.027 15.0 0.0 0.051 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 CTQ27068.1 - 0.03 13.4 0.1 0.058 12.4 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_24 PF13479.6 CTQ27068.1 - 0.032 14.0 0.2 0.096 12.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain Septin PF00735.18 CTQ27068.1 - 0.049 12.9 0.0 0.076 12.3 0.0 1.3 1 0 0 1 1 1 0 Septin RNA12 PF10443.9 CTQ27068.1 - 0.057 12.1 0.1 0.082 11.6 0.1 1.2 1 0 0 1 1 1 0 RNA12 protein Mg_chelatase PF01078.21 CTQ27068.1 - 0.064 12.6 0.0 0.17 11.3 0.0 1.7 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 CTQ27068.1 - 0.071 12.6 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region SbcCD_C PF13558.6 CTQ27068.1 - 0.081 13.2 0.9 3.2 8.1 0.3 2.9 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit RNA_helicase PF00910.22 CTQ27068.1 - 0.086 13.2 0.1 0.22 11.9 0.0 1.7 2 0 0 2 2 1 0 RNA helicase ATP_bind_1 PF03029.17 CTQ27068.1 - 0.086 12.6 0.3 0.25 11.1 0.1 1.8 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein Zeta_toxin PF06414.12 CTQ27068.1 - 0.12 11.7 0.1 0.24 10.7 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_25 PF13481.6 CTQ27068.1 - 0.13 11.8 0.6 0.33 10.5 0.2 1.8 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 CTQ27068.1 - 0.14 12.2 0.1 0.55 10.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 CTQ27069.1 - 4.8e-18 65.6 17.1 4.8e-18 65.6 17.1 1.6 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Cytochrom_B_C PF00032.17 CTQ27069.1 - 2.6 8.4 9.2 0.61 10.4 5.1 2.1 2 1 0 2 2 2 0 Cytochrome b(C-terminal)/b6/petD BPD_transp_1 PF00528.22 CTQ27070.1 - 5.3e-26 91.5 6.0 5.3e-26 91.5 6.0 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component PTS_EIIC_2 PF13303.6 CTQ27070.1 - 0.07 12.1 5.9 0.22 10.5 5.9 1.9 1 1 0 1 1 1 0 Phosphotransferase system, EIIC DUF3975 PF13126.6 CTQ27070.1 - 0.96 9.9 6.5 2.6 8.6 0.5 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3975) SBP_bac_3 PF00497.20 CTQ27071.1 - 1.1e-46 159.0 0.2 1.4e-46 158.7 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.11 CTQ27071.1 - 0.00022 21.3 0.1 0.27 11.2 0.1 2.2 1 1 1 2 2 2 2 NMT1/THI5 like DUF3991 PF13154.6 CTQ27071.1 - 0.0048 17.2 0.1 0.37 11.2 0.1 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3991) CN_hydrolase PF00795.22 CTQ27072.1 - 1.3e-39 136.1 0.0 1.7e-39 135.7 0.0 1.2 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase CorC_HlyC PF03471.17 CTQ27073.1 - 1.7e-23 82.4 0.4 6e-23 80.6 0.0 2.1 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 CTQ27073.1 - 1.3e-15 57.6 2.0 8e-08 32.6 0.2 2.6 2 0 0 2 2 2 2 CBS domain UPF0054 PF02130.17 CTQ27074.1 - 1.7e-38 131.3 0.0 2.1e-38 131.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0054 PhoH PF02562.16 CTQ27075.1 - 1.6e-95 318.4 0.0 2.1e-95 318.0 0.0 1.1 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.6 CTQ27075.1 - 1.7e-09 37.7 0.0 3.1e-09 36.8 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 CTQ27075.1 - 7.5e-05 23.1 0.1 0.00033 21.0 0.1 2.0 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 CTQ27075.1 - 0.0015 18.3 0.0 0.0052 16.5 0.0 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein DEAD PF00270.29 CTQ27075.1 - 0.0017 18.2 0.0 0.0041 16.9 0.0 1.8 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 CTQ27075.1 - 0.0061 16.8 0.0 0.018 15.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 CTQ27075.1 - 0.011 15.4 0.0 0.023 14.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain Zot PF05707.12 CTQ27075.1 - 0.054 13.1 0.0 6.1 6.4 0.0 2.4 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) Receptor_IA-2 PF11548.8 CTQ27075.1 - 0.096 12.7 0.1 3.7 7.6 0.0 2.7 3 0 0 3 3 3 0 Protein-tyrosine phosphatase receptor IA-2 UPF0004 PF00919.20 CTQ27076.1 - 3.2e-29 100.9 0.0 5.7e-29 100.1 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 Radical_SAM PF04055.21 CTQ27076.1 - 5.3e-28 98.5 0.0 8.2e-28 97.9 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily TRAM PF01938.20 CTQ27076.1 - 1.3e-18 66.7 0.6 3.1e-18 65.5 0.6 1.7 1 0 0 1 1 1 1 TRAM domain TRAM_2 PF18693.1 CTQ27076.1 - 0.012 15.7 0.5 0.041 14.1 0.5 1.9 1 1 0 1 1 1 0 TRAM domain B12-binding PF02310.19 CTQ27076.1 - 0.018 15.1 0.0 0.59 10.2 0.0 2.9 2 1 1 3 3 3 0 B12 binding domain FAD_binding_3 PF01494.19 CTQ27077.1 - 3.2e-37 128.6 0.2 4.4e-37 128.1 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 CTQ27077.1 - 3.3e-08 33.0 7.6 1.1e-06 28.0 3.7 2.6 2 1 0 2 2 2 2 Lycopene cyclase protein DAO PF01266.24 CTQ27077.1 - 1e-06 28.6 8.3 5e-06 26.3 1.3 2.6 1 1 0 2 2 2 1 FAD dependent oxidoreductase SE PF08491.10 CTQ27077.1 - 2.1e-06 27.0 0.0 7.3e-06 25.2 0.0 1.8 2 0 0 2 2 2 1 Squalene epoxidase Pyr_redox_2 PF07992.14 CTQ27077.1 - 6e-05 22.4 0.7 0.01 15.1 0.2 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ27077.1 - 7.3e-05 22.9 0.1 0.00021 21.5 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 CTQ27077.1 - 0.00011 21.2 5.8 0.0023 16.9 0.1 2.5 1 1 0 2 2 2 2 Tryptophan halogenase 3HCDH_N PF02737.18 CTQ27077.1 - 0.0096 15.8 0.3 0.016 15.1 0.3 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 CTQ27077.1 - 0.023 15.3 0.1 0.042 14.4 0.1 1.4 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Pyr_redox_3 PF13738.6 CTQ27077.1 - 0.061 12.6 0.1 0.58 9.3 0.0 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 CTQ27077.1 - 0.07 12.8 0.1 0.12 12.0 0.1 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Thi4 PF01946.17 CTQ27077.1 - 0.12 11.6 0.6 0.18 11.0 0.2 1.5 2 0 0 2 2 2 0 Thi4 family UDPG_MGDP_dh_N PF03721.14 CTQ27077.1 - 0.15 11.7 1.0 0.24 10.9 1.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox PF00070.27 CTQ27077.1 - 0.16 12.5 0.1 0.36 11.4 0.1 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ27077.1 - 0.17 10.6 3.8 1.6 7.3 1.3 2.2 2 0 0 2 2 2 0 HI0933-like protein NAD_binding_7 PF13241.6 CTQ27077.1 - 0.2 12.1 0.0 0.35 11.3 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding FAD_binding_2 PF00890.24 CTQ27077.1 - 0.21 10.7 9.7 0.042 12.9 5.7 1.9 2 1 0 2 2 2 0 FAD binding domain NAD_binding_9 PF13454.6 CTQ27077.1 - 0.29 11.1 2.2 2.6 8.0 2.2 2.2 1 1 0 1 1 1 0 FAD-NAD(P)-binding FAD_oxidored PF12831.7 CTQ27077.1 - 6.4 6.0 6.8 5.1 6.3 3.2 2.0 2 0 0 2 2 2 0 FAD dependent oxidoreductase Asn_synthase PF00733.21 CTQ27078.1 - 1.8e-105 353.5 0.3 6.8e-60 203.6 0.1 2.1 1 1 1 2 2 2 2 Asparagine synthase GATase_7 PF13537.6 CTQ27078.1 - 1.1e-42 144.9 0.0 3.5e-42 143.2 0.0 1.9 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_6 PF13522.6 CTQ27078.1 - 3e-37 127.8 0.0 7.7e-37 126.5 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase domain DUF3700 PF12481.8 CTQ27078.1 - 5.2e-08 32.6 0.0 1e-07 31.7 0.0 1.4 1 0 0 1 1 1 1 Aluminium induced protein NAD_synthase PF02540.17 CTQ27078.1 - 0.022 13.9 0.0 0.041 13.0 0.0 1.5 1 0 0 1 1 1 0 NAD synthase tRNA_Me_trans PF03054.16 CTQ27078.1 - 0.1 11.4 0.0 0.15 10.8 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase Stealth_CR4 PF17103.5 CTQ27078.1 - 0.11 12.3 0.0 22 5.1 0.0 2.4 2 0 0 2 2 2 0 Stealth protein CR4, conserved region 4 Hydrolase_6 PF13344.6 CTQ27079.1 - 1.7e-23 82.6 0.0 3.3e-23 81.7 0.0 1.5 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ27079.1 - 1e-19 70.3 0.0 2.2e-19 69.3 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 CTQ27079.1 - 2.8e-11 44.1 0.0 7.3e-11 42.8 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CTQ27079.1 - 1.2e-09 38.5 0.0 8.6e-09 35.7 0.0 2.0 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase ROK PF00480.20 CTQ27080.1 - 2.6e-95 319.3 0.7 3.4e-95 318.9 0.7 1.1 1 0 0 1 1 1 1 ROK family MarR PF01047.22 CTQ27080.1 - 3.7e-08 33.2 0.0 1.1e-07 31.7 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 CTQ27080.1 - 4.7e-05 22.9 0.2 4.7e-05 22.9 0.2 2.5 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ27080.1 - 6.5e-05 22.7 1.1 0.0002 21.2 0.3 2.2 2 0 0 2 2 2 1 MarR family Fe_dep_repress PF01325.19 CTQ27080.1 - 0.00014 21.9 0.0 0.00039 20.5 0.0 1.7 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 CTQ27080.1 - 0.0055 16.6 0.1 0.015 15.3 0.1 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 CTQ27080.1 - 0.0059 16.4 0.0 0.016 15.0 0.0 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain SMC_ScpB PF04079.16 CTQ27080.1 - 0.041 13.5 0.2 0.092 12.4 0.2 1.5 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB FeoC PF09012.10 CTQ27080.1 - 0.054 13.6 0.2 0.17 12.0 0.0 1.9 2 0 0 2 2 2 0 FeoC like transcriptional regulator TrmB PF01978.19 CTQ27080.1 - 0.068 13.1 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 CTQ27080.1 - 0.15 12.4 0.6 0.41 11.0 0.1 2.0 2 0 0 2 2 2 0 Transcriptional regulator Amidohydro_1 PF01979.20 CTQ27081.1 - 3.1e-47 161.6 0.1 3.6e-47 161.3 0.1 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 CTQ27081.1 - 2.3e-05 24.1 0.4 5.3e-05 22.9 0.0 1.8 2 0 0 2 2 2 1 Amidohydrolase family Glucosamine_iso PF01182.20 CTQ27082.1 - 2.3e-20 73.5 0.0 3.8e-20 72.8 0.0 1.3 1 1 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PBP_sp32 PF07222.12 CTQ27083.1 - 0.18 11.2 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 PTS_EIIC PF02378.18 CTQ27084.1 - 9.2e-75 251.6 35.1 9.2e-75 251.6 35.1 2.1 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIA_1 PF00358.20 CTQ27084.1 - 3.2e-47 159.4 0.4 5.6e-47 158.7 0.4 1.4 1 0 0 1 1 1 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PTS_EIIB PF00367.20 CTQ27084.1 - 1.6e-12 46.7 0.3 2.8e-12 45.9 0.3 1.4 1 0 0 1 1 1 1 phosphotransferase system, EIIB Peptidase_M23 PF01551.22 CTQ27084.1 - 0.0083 16.3 0.0 0.023 14.9 0.0 1.7 1 0 0 1 1 1 1 Peptidase family M23 Biotin_lipoyl PF00364.22 CTQ27084.1 - 0.032 14.1 0.0 5.6 6.9 0.0 2.9 2 0 0 2 2 2 0 Biotin-requiring enzyme OAD_gamma PF04277.13 CTQ27084.1 - 0.069 13.7 3.2 0.3 11.7 0.1 2.7 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain HemY_N PF07219.13 CTQ27084.1 - 0.079 13.2 0.1 0.079 13.2 0.1 2.4 3 0 0 3 3 3 0 HemY protein N-terminus TPPII_N PF12583.8 CTQ27084.1 - 0.9 10.1 6.5 2.3 8.8 6.5 1.7 1 0 0 1 1 1 0 Tripeptidyl peptidase II N terminal tRNA-synt_1c PF00749.21 CTQ27085.1 - 8.3e-129 429.0 0.0 1.1e-128 428.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 CTQ27085.1 - 9.6e-66 221.0 0.0 3.1e-65 219.3 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain FCSD-flav_bind PF09242.11 CTQ27086.1 - 0.17 12.3 0.0 0.24 11.8 0.0 1.3 1 0 0 1 1 1 0 Flavocytochrome c sulphide dehydrogenase, flavin-binding OprD PF03573.13 CTQ27087.1 - 8.2e-25 87.7 13.1 1.1e-24 87.3 13.1 1.1 1 0 0 1 1 1 1 outer membrane porin, OprD family DUF2749 PF10907.8 CTQ27087.1 - 0.085 13.0 0.1 0.26 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) NdhS PF11623.8 CTQ27087.1 - 0.092 12.4 0.1 0.23 11.1 0.1 1.6 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S MFS_1 PF07690.16 CTQ27088.1 - 1.4e-07 30.8 17.1 1.9e-07 30.3 17.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ27088.1 - 0.00039 19.4 7.0 0.00057 18.9 7.0 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter SpoVAB PF13782.6 CTQ27088.1 - 0.0025 18.1 1.3 0.0025 18.1 1.3 2.1 2 0 0 2 2 2 1 Stage V sporulation protein AB YrhC PF14143.6 CTQ27088.1 - 0.028 14.5 0.3 5.8 7.1 0.0 2.8 2 0 0 2 2 2 0 YrhC-like protein DUF5413 PF17434.2 CTQ27088.1 - 0.11 12.9 7.6 0.041 14.2 4.0 2.1 2 1 0 2 2 2 0 Family of unknown function (DUF5413) DUF4381 PF14316.6 CTQ27088.1 - 0.13 12.5 0.0 0.4 10.9 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) YbfN PF13982.6 CTQ27089.1 - 2.5e-49 165.5 5.6 2.9e-49 165.3 5.6 1.0 1 0 0 1 1 1 1 YbfN-like lipoprotein Peptidase_M13_N PF05649.13 CTQ27089.1 - 0.01 15.6 0.1 0.011 15.5 0.1 1.1 1 0 0 1 1 1 0 Peptidase family M13 CLIP PF12032.8 CTQ27089.1 - 0.37 11.1 2.8 1.1 9.6 2.5 1.9 1 1 1 2 2 2 0 Regulatory CLIP domain of proteinases FUR PF01475.19 CTQ27090.1 - 8.6e-48 161.4 0.2 1e-47 161.2 0.2 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_12 PF08461.10 CTQ27090.1 - 0.0012 18.7 0.0 0.0021 18.0 0.0 1.4 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain PadR PF03551.14 CTQ27090.1 - 0.003 17.5 0.1 0.0062 16.5 0.0 1.5 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family SR1P PF13790.6 CTQ27090.1 - 0.0066 16.5 3.8 0.18 11.9 0.3 2.4 2 0 0 2 2 2 2 SR1 protein HTH_Crp_2 PF13545.6 CTQ27090.1 - 0.034 14.1 0.0 1.4 8.9 0.0 2.5 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Flavodoxin_1 PF00258.25 CTQ27091.1 - 8e-34 116.9 0.0 9.6e-34 116.6 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 CTQ27091.1 - 1.9e-10 40.7 0.0 2.2e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.7 CTQ27091.1 - 2.6e-06 27.7 0.0 3.9e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain FMN_red PF03358.15 CTQ27091.1 - 0.065 13.0 0.0 12 5.6 0.0 2.8 2 1 1 3 3 3 0 NADPH-dependent FMN reductase RHH_1 PF01402.21 CTQ27092.1 - 1.2e-09 37.7 0.7 2.8e-09 36.6 0.7 1.6 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_4 PF13467.6 CTQ27092.1 - 0.079 12.9 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 Ribbon-helix-helix domain Abhydrolase_1 PF00561.20 CTQ27093.1 - 4.9e-21 75.5 0.6 3.5e-17 62.9 0.2 2.2 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 CTQ27093.1 - 7.9e-18 65.9 9.5 9.5e-18 65.6 9.5 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 CTQ27093.1 - 1.4e-08 34.3 0.3 5.7e-07 29.0 0.3 2.2 2 0 0 2 2 2 1 Serine aminopeptidase, S33 PGAP1 PF07819.13 CTQ27093.1 - 7.6e-08 32.3 0.0 0.00021 21.1 0.0 2.2 1 1 1 2 2 2 2 PGAP1-like protein Thioesterase PF00975.20 CTQ27093.1 - 0.0023 18.1 0.0 0.0038 17.4 0.0 1.5 1 1 0 1 1 1 1 Thioesterase domain DUF676 PF05057.14 CTQ27093.1 - 0.0025 17.3 0.0 0.0051 16.3 0.0 1.4 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF915 PF06028.11 CTQ27093.1 - 0.012 15.0 0.0 0.18 11.1 0.0 2.1 1 1 1 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) Ndr PF03096.14 CTQ27093.1 - 0.023 13.4 0.0 0.53 8.9 0.0 2.1 2 0 0 2 2 2 0 Ndr family Esterase PF00756.20 CTQ27093.1 - 0.069 12.8 0.0 0.099 12.3 0.0 1.4 1 0 0 1 1 1 0 Putative esterase Lipase_3 PF01764.25 CTQ27093.1 - 0.14 12.0 0.0 0.29 11.0 0.0 1.5 2 0 0 2 2 2 0 Lipase (class 3) Chlorophyllase2 PF12740.7 CTQ27093.1 - 0.16 10.9 0.0 0.23 10.3 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme SeqA PF03925.13 CTQ27094.1 - 3.3e-49 165.5 0.0 4.4e-49 165.0 0.0 1.2 1 0 0 1 1 1 1 SeqA protein C-terminal domain SeqA_N PF17206.3 CTQ27094.1 - 1.6e-23 81.7 0.6 2.8e-23 80.9 0.6 1.4 1 0 0 1 1 1 1 SeqA protein N-terminal domain PGM_PMM_I PF02878.16 CTQ27095.1 - 9e-36 122.6 0.1 2.5e-35 121.2 0.1 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 CTQ27095.1 - 5.3e-31 107.2 0.0 1.1e-30 106.2 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 CTQ27095.1 - 9.5e-21 74.4 0.0 2.9e-20 72.8 0.0 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 CTQ27095.1 - 1.3e-07 31.7 0.0 3.6e-07 30.3 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Response_reg PF00072.24 CTQ27097.1 - 1.5e-28 99.2 0.0 2.1e-28 98.7 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ27097.1 - 2.1e-22 78.9 0.0 4.8e-22 77.8 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal MarR_2 PF12802.7 CTQ27097.1 - 0.014 15.2 0.1 0.05 13.5 0.1 1.9 1 0 0 1 1 1 0 MarR family KdpD PF02702.17 CTQ27098.1 - 1.4e-96 322.0 0.0 2.1e-96 321.4 0.0 1.3 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain DUF4118 PF13493.6 CTQ27098.1 - 2e-28 98.3 14.3 2e-28 98.3 14.3 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4118) HATPase_c PF02518.26 CTQ27098.1 - 1.5e-22 80.2 0.0 2.6e-22 79.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ27098.1 - 1.7e-10 40.7 1.5 1.7e-10 40.7 1.5 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain GAF_3 PF13492.6 CTQ27098.1 - 4.3e-07 30.3 0.0 1.1e-06 29.0 0.0 1.8 1 0 0 1 1 1 1 GAF domain Usp PF00582.26 CTQ27098.1 - 0.00012 22.6 0.6 0.0027 18.2 0.6 2.7 1 1 0 1 1 1 1 Universal stress protein family HATPase_c_2 PF13581.6 CTQ27098.1 - 0.014 15.4 0.0 0.031 14.2 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain AAA_30 PF13604.6 CTQ27098.1 - 0.041 13.6 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain KdpC PF02669.15 CTQ27099.1 - 4.8e-68 228.6 0.4 5.4e-68 228.4 0.4 1.0 1 0 0 1 1 1 1 K+-transporting ATPase, c chain T7SS_ESX_EspC PF10824.8 CTQ27099.1 - 0.018 15.5 1.6 0.63 10.5 0.3 2.3 2 1 0 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm Hydrolase PF00702.26 CTQ27100.1 - 4.1e-36 125.2 3.6 6.5e-36 124.6 3.6 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 CTQ27100.1 - 1.1e-33 116.2 0.5 1.1e-33 116.2 0.5 2.8 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 CTQ27100.1 - 6.7e-05 22.8 1.0 0.00026 20.8 0.2 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ27100.1 - 9.4e-05 22.9 0.7 0.00079 19.9 0.1 2.6 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase KdpA PF03814.15 CTQ27101.1 - 4.2e-243 807.5 32.7 4.9e-243 807.3 32.7 1.0 1 0 0 1 1 1 1 Potassium-transporting ATPase A subunit DUF2517 PF10725.9 CTQ27102.1 - 2.5e-31 107.2 4.2 2.8e-31 107.1 4.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2517) DUF2919 PF11143.8 CTQ27102.1 - 0.0018 18.6 0.2 0.0019 18.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2919) GT87 PF09594.10 CTQ27102.1 - 0.007 16.1 0.5 0.0072 16.1 0.5 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 87 FAD_binding_7 PF03441.14 CTQ27103.1 - 9.1e-84 280.0 6.0 1.3e-83 279.5 6.0 1.2 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.18 CTQ27103.1 - 1.1e-45 155.5 0.3 3.2e-45 154.1 0.3 1.8 1 0 0 1 1 1 1 DNA photolyase PTR2 PF00854.21 CTQ27104.1 - 1.2e-89 300.9 13.7 1.6e-89 300.6 13.7 1.1 1 0 0 1 1 1 1 POT family MFS_1 PF07690.16 CTQ27104.1 - 6.3e-15 55.0 46.7 2e-14 53.3 42.7 2.7 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF3290 PF11694.8 CTQ27104.1 - 0.022 14.7 1.4 0.022 14.7 1.4 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3290) DUF4271 PF14093.6 CTQ27104.1 - 0.16 11.8 0.0 0.16 11.8 0.0 4.7 3 2 2 5 5 5 0 Domain of unknown function (DUF4271) NIF3 PF01784.18 CTQ27105.1 - 2e-57 194.7 0.0 2.3e-57 194.4 0.0 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) CT_C_D PF02682.16 CTQ27106.1 - 5.9e-70 235.1 0.0 6.7e-70 234.9 0.0 1.0 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain C and D CT_A_B PF02626.15 CTQ27107.1 - 7.6e-98 327.3 0.0 8.7e-98 327.1 0.0 1.0 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain A and B LamB_YcsF PF03746.16 CTQ27108.1 - 7.7e-93 310.6 0.9 8.7e-93 310.4 0.9 1.0 1 0 0 1 1 1 1 LamB/YcsF family DUF969 PF06149.12 CTQ27109.1 - 1.3e-89 299.3 3.1 1.5e-89 299.1 3.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF969) Na_H_antiport_2 PF13726.6 CTQ27109.1 - 0.00027 21.0 1.7 0.00052 20.1 1.7 1.5 1 0 0 1 1 1 1 Na+-H+ antiporter family PrgI PF12666.7 CTQ27109.1 - 3.6 8.4 8.4 13 6.6 4.0 2.9 2 1 0 2 2 2 0 PrgI family protein DUF979 PF06166.12 CTQ27110.1 - 1.7e-126 421.6 21.6 2e-126 421.4 21.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF979) Peptidase_C15 PF01470.17 CTQ27111.1 - 1.7e-81 273.2 0.2 2e-81 273.0 0.2 1.0 1 0 0 1 1 1 1 Pyroglutamyl peptidase H2TH PF06831.14 CTQ27112.1 - 1e-11 44.7 0.0 2e-11 43.7 0.0 1.5 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain Fapy_DNA_glyco PF01149.24 CTQ27112.1 - 4.6e-10 40.1 0.0 1.2e-09 38.8 0.0 1.6 2 0 0 2 2 2 1 Formamidopyrimidine-DNA glycosylase N-terminal domain zf-FPG_IleRS PF06827.14 CTQ27112.1 - 6.2e-08 32.3 4.6 1.2e-07 31.4 4.6 1.5 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS DUF4351 PF14261.6 CTQ27112.1 - 0.031 14.3 0.2 0.094 12.8 0.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4351) FbpA PF05833.11 CTQ27112.1 - 0.092 11.5 0.0 0.12 11.1 0.0 1.2 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) Zn-ribbon_8 PF09723.10 CTQ27112.1 - 0.22 11.7 0.9 0.37 10.9 0.9 1.4 1 0 0 1 1 1 0 Zinc ribbon domain Citrate_synt PF00285.21 CTQ27113.1 - 8.3e-133 442.9 0.1 9.6e-133 442.7 0.1 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Sdh_cyt PF01127.22 CTQ27114.1 - 1e-29 103.0 5.2 1.2e-29 102.8 5.2 1.0 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Sdh_cyt PF01127.22 CTQ27115.1 - 6.1e-06 26.3 13.0 7.3e-06 26.0 13.0 1.2 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CybS PF05328.12 CTQ27115.1 - 0.011 15.4 3.0 0.015 15.0 2.8 1.5 1 1 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit Fumarate_red_C PF02300.17 CTQ27115.1 - 0.29 11.2 12.2 0.65 10.1 12.2 1.6 1 1 0 1 1 1 0 Fumarate reductase subunit C CbtB PF09489.10 CTQ27115.1 - 0.96 9.6 8.3 0.55 10.4 0.6 2.7 2 0 0 2 2 2 0 Probable cobalt transporter subunit (CbtB) FAD_binding_2 PF00890.24 CTQ27116.1 - 6.3e-119 397.8 5.5 7.6e-119 397.5 5.5 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 CTQ27116.1 - 2.2e-35 121.5 0.1 3.4e-35 120.8 0.1 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 CTQ27116.1 - 0.00018 20.9 2.0 0.0024 17.2 0.6 2.6 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ27116.1 - 0.00024 20.3 3.2 0.0021 17.2 0.9 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A HI0933_like PF03486.14 CTQ27116.1 - 0.0051 15.6 0.2 0.0051 15.6 0.2 2.3 3 0 0 3 3 3 1 HI0933-like protein DAO PF01266.24 CTQ27116.1 - 0.016 14.8 5.8 0.36 10.4 5.7 2.3 1 1 0 1 1 1 0 FAD dependent oxidoreductase Thi4 PF01946.17 CTQ27116.1 - 0.07 12.4 0.2 0.85 8.8 0.1 2.2 2 0 0 2 2 2 0 Thi4 family Fer2_3 PF13085.6 CTQ27117.1 - 1.7e-31 108.4 0.0 2.5e-31 107.9 0.0 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 CTQ27117.1 - 4.5e-10 39.9 1.2 8.3e-10 39.1 1.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ27117.1 - 2.8e-08 34.1 4.1 3.4e-07 30.6 4.0 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ27117.1 - 2.5e-07 30.7 1.5 4.8e-07 29.8 1.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ27117.1 - 0.0005 20.2 3.5 0.0031 17.7 3.8 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 CTQ27117.1 - 0.001 19.6 7.1 0.0059 17.2 7.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 CTQ27117.1 - 0.0055 16.9 2.5 0.74 10.0 0.0 2.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 CTQ27117.1 - 0.009 16.9 2.8 2.9 8.9 0.8 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 CTQ27117.1 - 0.24 12.0 8.5 6.4 7.5 2.3 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 CTQ27117.1 - 0.45 10.4 13.7 0.54 10.2 0.5 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 CTQ27117.1 - 4 7.7 11.3 0.59 10.3 0.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Transket_pyr PF02779.24 CTQ27118.1 - 2.3e-67 226.1 0.0 3.7e-67 225.4 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain OxoGdeHyase_C PF16870.5 CTQ27118.1 - 2.7e-54 183.0 0.0 5.7e-54 181.9 0.0 1.6 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal E1_dh PF00676.20 CTQ27118.1 - 1.1e-48 165.8 0.0 2.1e-48 164.8 0.0 1.4 1 0 0 1 1 1 1 Dehydrogenase E1 component 2-oxogl_dehyd_N PF16078.5 CTQ27118.1 - 5.7e-16 57.8 1.4 1.8e-15 56.2 0.4 2.2 2 0 0 2 2 2 1 2-oxoglutarate dehydrogenase N-terminus PFOR_II PF17147.4 CTQ27118.1 - 0.0039 17.5 0.1 0.013 15.8 0.0 1.9 2 0 0 2 2 2 1 Pyruvate:ferredoxin oxidoreductase core domain II 2-oxoacid_dh PF00198.23 CTQ27119.1 - 6.8e-81 271.1 0.0 8.5e-81 270.8 0.0 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 CTQ27119.1 - 8.5e-17 60.8 0.2 1.9e-16 59.6 0.2 1.6 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 CTQ27119.1 - 6.2e-13 48.9 2.6 1.2e-12 47.9 0.3 2.3 2 0 0 2 2 2 1 e3 binding domain Rhamnogal_lyase PF06045.11 CTQ27119.1 - 0.16 11.4 0.1 0.77 9.1 0.1 1.9 1 1 1 2 2 2 0 Rhamnogalacturonate lyase family Stm1_N PF09598.10 CTQ27119.1 - 5 8.0 9.2 11 6.9 1.4 2.5 2 0 0 2 2 2 0 Stm1 ATP-grasp_2 PF08442.10 CTQ27120.1 - 4.9e-84 280.9 0.0 7e-84 280.4 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.19 CTQ27120.1 - 6.3e-25 87.8 3.1 1.2e-24 86.9 3.1 1.5 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 CTQ27120.1 - 1.1e-14 54.4 0.0 2e-14 53.6 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 CTQ27120.1 - 0.00077 19.3 0.0 0.0015 18.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BAT PF15915.5 CTQ27120.1 - 0.062 13.2 0.2 0.86 9.5 0.1 2.2 2 0 0 2 2 2 0 GAF and HTH_10 associated domain CoA_binding PF02629.19 CTQ27121.1 - 1.6e-31 108.8 0.9 1.6e-31 108.8 0.9 2.4 3 1 0 3 3 3 1 CoA binding domain Ligase_CoA PF00549.19 CTQ27121.1 - 5.6e-20 71.7 0.6 8.4e-20 71.1 0.6 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 CTQ27121.1 - 1.2e-11 44.6 0.1 1.9e-11 43.9 0.1 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 CTQ27121.1 - 0.00022 21.7 0.1 0.00095 19.7 0.0 2.1 3 0 0 3 3 3 1 CoA binding domain Cyt_bd_oxida_I PF01654.17 CTQ27123.1 - 8.4e-173 574.8 22.2 9.6e-173 574.6 22.2 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I DUF3704 PF12488.8 CTQ27123.1 - 0.026 14.2 0.3 11 5.8 0.2 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3704) Cyt_bd_oxida_II PF02322.15 CTQ27124.1 - 4.2e-111 371.1 35.4 4.9e-111 370.9 35.4 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II YbgT_YccB PF08173.11 CTQ27125.1 - 1.4e-14 53.9 6.7 1.6e-14 53.7 6.7 1.1 1 0 0 1 1 1 1 Membrane bound YbgT-like protein Cyd_oper_YbgE PF09600.10 CTQ27126.1 - 1e-32 112.3 8.1 1.3e-32 112.0 8.1 1.1 1 0 0 1 1 1 1 Cyd operon protein YbgE (Cyd_oper_YbgE) 4HBT PF03061.22 CTQ27127.1 - 7.2e-19 67.9 0.7 1e-18 67.5 0.7 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 CTQ27127.1 - 5e-10 39.9 0.2 5.5e-10 39.8 0.2 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 CTQ27127.1 - 0.00025 20.4 0.0 0.00029 20.2 0.0 1.1 1 0 0 1 1 1 1 Acyl-ACP thioesterase MotA_ExbB PF01618.16 CTQ27128.1 - 3.3e-41 140.0 0.5 5e-41 139.4 0.5 1.2 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family ExbD PF02472.16 CTQ27129.1 - 1.4e-23 83.4 0.2 1.6e-23 83.3 0.2 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR Radical_SAM PF04055.21 CTQ27129.1 - 0.18 12.2 0.0 0.33 11.3 0.0 1.4 1 1 0 1 1 1 0 Radical SAM superfamily TolA PF06519.11 CTQ27130.1 - 3.4e-37 126.5 0.0 3.4e-37 126.5 0.0 4.0 2 1 2 5 5 5 1 TolA C-terminal TonB_C PF03544.14 CTQ27130.1 - 0.00092 19.6 0.0 0.00092 19.6 0.0 4.0 2 1 3 5 5 5 1 Gram-negative bacterial TonB protein C-terminal THRAP3_BCLAF1 PF15440.6 CTQ27130.1 - 3.2 6.6 40.2 5.3 5.9 40.2 1.3 1 0 0 1 1 1 0 THRAP3/BCLAF1 family PD40 PF07676.12 CTQ27131.1 - 5.6e-40 134.5 2.6 2.7e-11 43.1 0.1 6.4 6 0 0 6 6 6 5 WD40-like Beta Propeller Repeat TolB_N PF04052.13 CTQ27131.1 - 6.1e-34 116.4 0.0 1.4e-33 115.2 0.0 1.6 1 0 0 1 1 1 1 TolB amino-terminal domain DPPIV_N PF00930.21 CTQ27131.1 - 1.7e-11 43.5 0.0 3.8e-08 32.5 0.0 2.8 1 1 1 2 2 2 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region Pectate_lyase22 PF14583.6 CTQ27131.1 - 2.4e-09 36.3 0.1 0.00049 18.9 0.0 3.3 1 1 2 3 3 3 3 Oligogalacturonate lyase Gmad1 PF10647.9 CTQ27131.1 - 4.1e-09 36.6 3.8 3.7e-05 23.6 0.6 4.1 2 1 1 3 3 3 2 Lipoprotein LpqB beta-propeller domain Peptidase_S9_N PF02897.15 CTQ27131.1 - 0.0014 17.6 0.0 0.018 13.9 0.0 2.1 2 0 0 2 2 2 1 Prolyl oligopeptidase, N-terminal beta-propeller domain OmpA PF00691.20 CTQ27132.1 - 5.5e-22 78.0 0.0 9.3e-22 77.2 0.0 1.4 1 0 0 1 1 1 1 OmpA family TolA_bind_tri PF16331.5 CTQ27133.1 - 8.2e-25 86.7 11.9 1.3e-24 86.0 11.9 1.3 1 0 0 1 1 1 1 TolA binding protein trimerisation TPR_6 PF13174.6 CTQ27133.1 - 3.2e-21 74.5 0.2 1.1e-06 28.8 0.0 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 CTQ27133.1 - 1.3e-09 38.5 0.1 1.5e-05 25.6 0.0 3.6 1 1 1 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 CTQ27133.1 - 2.4e-09 36.6 0.0 0.0022 18.0 0.1 3.6 4 0 0 4 4 4 2 Tetratricopeptide repeat YfiO PF13525.6 CTQ27133.1 - 6.2e-09 35.9 1.7 0.00066 19.4 0.2 2.5 1 1 1 2 2 2 2 Outer membrane lipoprotein TPR_18 PF13512.6 CTQ27133.1 - 2.3e-06 27.8 4.1 0.041 14.0 0.2 3.4 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 CTQ27133.1 - 7.8e-06 25.7 0.1 0.29 11.5 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ27133.1 - 8e-05 23.1 0.0 1.9 9.5 0.0 3.8 3 1 1 4 4 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 CTQ27133.1 - 0.00034 21.0 4.2 0.014 15.9 0.1 3.6 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 CTQ27133.1 - 0.00064 19.9 0.2 0.92 10.0 0.4 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF4810 PF16068.5 CTQ27133.1 - 0.0025 18.3 1.8 6.5 7.4 0.0 3.7 2 1 2 4 4 4 1 Domain of unknown function (DUF4810) TPR_21 PF09976.9 CTQ27133.1 - 0.0032 17.2 10.2 0.033 13.9 0.3 3.1 2 1 0 3 3 3 2 Tetratricopeptide repeat-like domain Spc7 PF08317.11 CTQ27133.1 - 0.0034 16.3 0.9 0.0048 15.8 0.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF3552 PF12072.8 CTQ27133.1 - 0.0065 15.9 3.0 0.011 15.2 3.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) HrpB7 PF09486.10 CTQ27133.1 - 0.013 15.9 2.7 0.023 15.1 2.7 1.5 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) ANAPC3 PF12895.7 CTQ27133.1 - 0.019 15.2 0.2 0.097 12.9 0.2 2.2 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 MscS_porin PF12795.7 CTQ27133.1 - 0.03 13.9 18.7 0.88 9.1 13.3 3.0 3 0 0 3 3 3 0 Mechanosensitive ion channel porin domain COG2 PF06148.11 CTQ27133.1 - 0.035 14.2 0.8 0.066 13.3 0.8 1.4 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 TPR_1 PF00515.28 CTQ27133.1 - 0.084 12.7 1.2 2.2 8.2 0.2 2.8 3 0 0 3 3 2 0 Tetratricopeptide repeat IFT57 PF10498.9 CTQ27133.1 - 0.11 11.5 2.7 0.16 10.9 2.7 1.2 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 nos_propeller PF18764.1 CTQ27133.1 - 0.16 11.9 0.1 0.64 10.0 0.0 2.0 2 0 0 2 2 1 0 Nitrous oxide reductase propeller repeat TPR_11 PF13414.6 CTQ27133.1 - 0.25 11.0 7.3 4.3 7.1 0.8 4.0 3 1 1 4 4 4 0 TPR repeat Prominin PF05478.11 CTQ27133.1 - 0.82 7.6 3.5 1.2 7.0 3.5 1.1 1 0 0 1 1 1 0 Prominin SlyX PF04102.12 CTQ27133.1 - 0.89 10.2 11.1 1.9 9.2 10.5 1.8 1 1 1 2 2 2 0 SlyX DUF3915 PF13054.6 CTQ27134.1 - 0.15 12.1 0.0 0.17 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) NadA PF02445.16 CTQ27135.1 - 2e-103 345.7 0.0 2.3e-103 345.5 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein NMN_transporter PF04973.12 CTQ27136.1 - 1.4e-52 178.2 25.1 1.8e-52 177.9 25.1 1.1 1 0 0 1 1 1 1 Nicotinamide mononucleotide transporter LapA_dom PF06305.11 CTQ27136.1 - 0.28 11.0 9.3 1.8 8.5 0.1 3.3 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain Cation_efflux PF01545.21 CTQ27137.1 - 7.3e-51 172.7 14.5 8.8e-51 172.5 14.5 1.1 1 0 0 1 1 1 1 Cation efflux family OPT PF03169.15 CTQ27137.1 - 0.0011 17.7 0.3 0.0011 17.7 0.3 2.1 1 1 1 2 2 2 1 OPT oligopeptide transporter protein Vut_1 PF02592.15 CTQ27137.1 - 0.095 13.0 8.2 0.04 14.3 4.9 1.8 2 0 0 2 2 2 0 Putative vitamin uptake transporter DUF1673 PF07895.11 CTQ27137.1 - 0.36 10.5 1.4 1.6 8.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1673) YbgS PF13985.6 CTQ27138.1 - 9e-50 168.0 17.2 1e-49 167.8 17.2 1.0 1 0 0 1 1 1 1 YbgS-like protein DAHP_synth_1 PF00793.20 CTQ27139.1 - 2.3e-111 371.1 0.0 2.7e-111 370.8 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family His_Phos_1 PF00300.22 CTQ27140.1 - 2.7e-37 128.4 0.0 5.8e-34 117.5 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Aldose_epim PF01263.20 CTQ27141.1 - 1.4e-88 297.1 0.0 1.5e-88 297.0 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase GalKase_gal_bdg PF10509.9 CTQ27142.1 - 3.3e-22 77.8 0.1 6.3e-22 76.9 0.1 1.5 1 0 0 1 1 1 1 Galactokinase galactose-binding signature GHMP_kinases_C PF08544.13 CTQ27142.1 - 1.4e-14 54.2 0.1 3.6e-14 52.9 0.0 1.7 2 0 0 2 2 2 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 CTQ27142.1 - 2.8e-14 53.1 0.3 5.2e-14 52.2 0.3 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GalP_UDP_tr_C PF02744.17 CTQ27143.1 - 3.9e-71 238.2 0.1 8.5e-71 237.1 0.1 1.5 2 0 0 2 2 2 1 Galactose-1-phosphate uridyl transferase, C-terminal domain GalP_UDP_transf PF01087.22 CTQ27143.1 - 1e-70 237.9 0.0 1.5e-70 237.4 0.0 1.2 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, N-terminal domain HIT PF01230.23 CTQ27143.1 - 0.00016 22.4 0.0 0.0011 19.7 0.0 2.1 2 0 0 2 2 2 1 HIT domain DUF4921 PF16268.5 CTQ27143.1 - 0.041 12.7 0.7 0.16 10.7 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4921) GDP_Man_Dehyd PF16363.5 CTQ27144.1 - 1.6e-65 221.7 0.0 1.8e-65 221.5 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 CTQ27144.1 - 4e-61 206.6 0.0 4.8e-61 206.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 CTQ27144.1 - 1.1e-20 73.8 0.0 9e-20 70.8 0.0 1.9 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 CTQ27144.1 - 1.6e-18 66.9 0.0 1.5e-17 63.7 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 CTQ27144.1 - 1.3e-14 54.0 0.0 2.4e-14 53.1 0.0 1.4 2 0 0 2 2 2 1 RmlD substrate binding domain NmrA PF05368.13 CTQ27144.1 - 8e-12 45.2 0.0 4.9e-09 36.1 0.0 2.3 2 0 0 2 2 2 2 NmrA-like family NAD_binding_10 PF13460.6 CTQ27144.1 - 5.6e-11 42.7 0.0 1.3e-10 41.5 0.0 1.6 2 0 0 2 2 2 1 NAD(P)H-binding KR PF08659.10 CTQ27144.1 - 5.3e-08 33.0 0.0 9.6e-08 32.1 0.0 1.4 1 0 0 1 1 1 1 KR domain adh_short PF00106.25 CTQ27144.1 - 7.3e-08 32.1 0.1 1.6e-07 31.0 0.1 1.7 1 1 0 1 1 1 1 short chain dehydrogenase NAD_binding_4 PF07993.12 CTQ27144.1 - 6.6e-06 25.5 0.1 0.00026 20.2 0.1 2.5 1 1 0 1 1 1 1 Male sterility protein UDPG_MGDP_dh_N PF03721.14 CTQ27144.1 - 0.0055 16.3 0.1 0.0089 15.6 0.1 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain adh_short_C2 PF13561.6 CTQ27144.1 - 0.026 14.1 0.1 0.052 13.1 0.0 1.5 2 0 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase Semialdhyde_dh PF01118.24 CTQ27144.1 - 0.13 12.7 0.1 0.39 11.2 0.1 1.7 1 1 1 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain TrkA_N PF02254.18 CTQ27144.1 - 0.16 12.3 0.1 0.71 10.1 0.0 1.9 1 1 1 2 2 2 0 TrkA-N domain ABC_tran PF00005.27 CTQ27145.1 - 9.7e-47 158.9 0.0 1.3e-25 90.5 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ27145.1 - 1e-16 61.6 12.8 3.8e-08 33.5 0.4 4.2 2 2 2 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ27145.1 - 5e-08 33.5 7.0 0.00035 21.0 1.5 3.0 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 CTQ27145.1 - 9.3e-08 31.7 0.1 0.0054 16.5 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ27145.1 - 2.8e-07 30.6 0.3 0.23 11.4 0.1 3.3 2 1 0 3 3 3 2 RsgA GTPase SMC_N PF02463.19 CTQ27145.1 - 3.6e-07 29.8 3.1 0.22 11.0 0.9 4.0 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ27145.1 - 2.4e-06 27.9 2.1 0.12 12.6 0.1 3.6 2 2 0 2 2 2 2 AAA domain AAA_23 PF13476.6 CTQ27145.1 - 2.9e-06 27.9 0.4 0.033 14.7 0.0 2.4 2 1 0 2 2 2 2 AAA domain SbcCD_C PF13558.6 CTQ27145.1 - 3.3e-05 24.0 0.2 0.021 15.1 0.1 3.6 3 1 0 3 3 2 1 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 CTQ27145.1 - 6.1e-05 23.2 0.4 0.1 12.7 0.1 2.8 2 1 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 CTQ27145.1 - 9.5e-05 22.2 3.0 0.22 11.2 0.1 4.5 3 1 1 4 4 4 1 IstB-like ATP binding protein MMR_HSR1 PF01926.23 CTQ27145.1 - 0.0002 21.4 0.5 1.2 9.2 0.0 3.1 3 1 0 3 3 2 2 50S ribosome-binding GTPase NB-ARC PF00931.22 CTQ27145.1 - 0.00032 20.0 0.0 1.6 7.9 0.0 3.4 3 1 0 3 3 3 2 NB-ARC domain AAA_15 PF13175.6 CTQ27145.1 - 0.0006 19.6 0.0 0.36 10.5 0.0 2.6 3 0 0 3 3 3 1 AAA ATPase domain AAA PF00004.29 CTQ27145.1 - 0.00076 19.9 0.1 0.16 12.4 0.0 3.1 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 CTQ27145.1 - 0.0025 17.3 0.0 0.63 9.5 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region RNA_helicase PF00910.22 CTQ27145.1 - 0.0032 17.8 0.0 1.2 9.5 0.0 2.5 2 0 0 2 2 2 1 RNA helicase Mg_chelatase PF01078.21 CTQ27145.1 - 0.0033 16.9 0.0 0.093 12.1 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 CTQ27145.1 - 0.0033 17.7 0.0 0.82 9.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain Dynamin_N PF00350.23 CTQ27145.1 - 0.0038 17.3 0.0 0.3 11.1 0.0 2.3 2 0 0 2 2 2 1 Dynamin family AAA_25 PF13481.6 CTQ27145.1 - 0.0056 16.3 0.6 1.2 8.7 0.4 3.1 2 1 1 3 3 3 1 AAA domain Zeta_toxin PF06414.12 CTQ27145.1 - 0.0059 15.9 0.1 3.5 6.9 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin Ploopntkinase1 PF18748.1 CTQ27145.1 - 0.0089 15.6 0.0 0.76 9.3 0.0 2.3 2 0 0 2 2 2 1 P-loop Nucleotide Kinase1 AAA_18 PF13238.6 CTQ27145.1 - 0.01 16.4 0.0 3.6 8.1 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 CTQ27145.1 - 0.014 15.2 0.4 6.7 6.4 0.0 3.5 3 1 0 3 3 3 0 AAA domain HopA1 PF17914.1 CTQ27145.1 - 0.034 13.9 0.0 3.8 7.2 0.0 2.3 2 0 0 2 2 2 0 HopA1 effector protein family NACHT PF05729.12 CTQ27145.1 - 0.041 13.8 6.9 1.7 8.5 1.5 3.6 3 1 0 3 3 3 0 NACHT domain AAA_10 PF12846.7 CTQ27145.1 - 0.043 12.7 0.2 2.5 6.9 0.0 2.4 2 0 0 2 2 2 0 AAA-like domain DUF3584 PF12128.8 CTQ27145.1 - 0.048 11.2 0.0 0.1 10.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_27 PF13514.6 CTQ27145.1 - 0.074 12.6 0.1 1.4 8.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain DUF2813 PF11398.8 CTQ27145.1 - 0.17 11.1 0.5 2.6 7.2 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) AAA_13 PF13166.6 CTQ27145.1 - 0.29 9.7 0.1 8.5 4.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain TOBE PF03459.17 CTQ27146.1 - 1.1e-26 92.9 0.4 2.7e-13 50.0 0.3 2.3 2 0 0 2 2 2 2 TOBE domain HTH_1 PF00126.27 CTQ27146.1 - 5e-15 55.2 0.0 1.1e-14 54.1 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family TOBE_2 PF08402.10 CTQ27146.1 - 0.0042 17.2 0.3 0.086 13.0 0.0 2.2 1 1 1 2 2 2 1 TOBE domain TOBE_3 PF12857.7 CTQ27146.1 - 0.011 15.7 0.8 0.27 11.2 0.1 2.5 2 0 0 2 2 2 0 TOBE-like domain HTH_29 PF13551.6 CTQ27146.1 - 0.03 14.3 0.1 0.17 11.9 0.0 2.3 2 1 1 3 3 3 0 Winged helix-turn helix HTH_28 PF13518.6 CTQ27146.1 - 0.045 13.9 0.0 0.17 12.0 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain PEX-2N PF09263.10 CTQ27146.1 - 0.1 12.9 0.1 0.27 11.6 0.1 1.8 1 0 0 1 1 1 0 Peroxisome biogenesis factor 1, N-terminal tRNA_anti_2 PF13742.6 CTQ27146.1 - 0.14 12.3 0.0 0.74 10.1 0.0 2.0 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain SBP_bac_11 PF13531.6 CTQ27147.1 - 2.2e-50 171.6 7.5 2.5e-50 171.4 7.5 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ27147.1 - 1.5e-16 61.2 6.0 1.9e-16 60.9 6.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Chorion_1 PF01723.16 CTQ27147.1 - 0.93 9.4 3.6 1.6 8.7 0.1 2.8 2 1 1 3 3 3 0 Chorion protein BPD_transp_1 PF00528.22 CTQ27148.1 - 9.4e-23 80.9 14.8 1.1e-22 80.6 14.8 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Candida_ALS PF05792.13 CTQ27148.1 - 2.6 8.7 4.2 22 5.7 0.1 2.6 3 0 0 3 3 3 0 Candida agglutinin-like (ALS) ABC_tran PF00005.27 CTQ27149.1 - 3e-30 105.5 0.0 4.9e-30 104.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 CTQ27149.1 - 2.1e-17 63.2 0.4 1e-16 60.9 0.1 2.3 2 1 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 CTQ27149.1 - 8.5e-05 22.5 1.3 0.046 13.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ27149.1 - 0.0018 18.2 0.1 0.0034 17.3 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 CTQ27149.1 - 0.0021 17.8 0.0 0.0043 16.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ27149.1 - 0.0024 18.4 0.1 0.004 17.7 0.1 1.3 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ27149.1 - 0.0046 16.4 0.2 0.081 12.3 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ27149.1 - 0.014 15.7 0.4 0.47 10.7 0.1 2.5 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 CTQ27149.1 - 0.02 15.0 0.2 0.033 14.3 0.2 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.6 CTQ27149.1 - 0.031 14.7 0.2 0.061 13.7 0.2 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 CTQ27149.1 - 0.1 12.3 0.0 0.25 11.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 CTQ27149.1 - 0.1 12.6 0.1 0.18 11.9 0.1 1.4 1 0 0 1 1 1 0 Dynamin family SbcCD_C PF13558.6 CTQ27149.1 - 0.2 11.9 0.0 5.8 7.2 0.0 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Hydrolase_3 PF08282.12 CTQ27150.1 - 3.3e-61 207.3 0.0 3.7e-61 207.1 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 CTQ27150.1 - 4e-13 49.5 0.1 1.5e-06 28.0 0.1 2.2 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 CTQ27150.1 - 2e-12 47.9 0.2 5.6e-12 46.4 0.2 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ27150.1 - 1e-08 35.8 4.8 0.0018 18.7 0.1 3.4 2 2 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 CTQ27150.1 - 0.0003 20.8 0.0 0.00095 19.2 0.0 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CTQ27150.1 - 0.0077 16.3 0.1 10 6.1 0.0 3.1 2 1 1 3 3 3 1 Haloacid dehalogenase-like hydrolase Acid_phosphat_B PF03767.14 CTQ27150.1 - 0.019 14.5 1.0 9.5 5.7 0.0 3.1 2 1 1 3 3 3 0 HAD superfamily, subfamily IIIB (Acid phosphatase) Lactonase PF10282.9 CTQ27151.1 - 1.3e-86 291.0 0.0 1.7e-86 290.6 0.0 1.1 1 0 0 1 1 1 1 Lactonase, 7-bladed beta-propeller SGL PF08450.12 CTQ27151.1 - 1.5e-05 24.8 0.0 0.003 17.2 0.0 2.7 2 2 0 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 CTQ27151.1 - 0.0051 17.0 0.0 21 5.4 0.0 4.5 6 0 0 6 6 6 2 Arylesterase YmgB PF10798.8 CTQ27152.1 - 3.8e-23 81.1 1.3 5.6e-23 80.5 1.3 1.3 1 0 0 1 1 1 1 Biofilm development protein YmgB/AriR DUF3598 PF12204.8 CTQ27153.1 - 0.16 11.4 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3598) YmgB PF10798.8 CTQ27154.1 - 8.8e-05 22.3 0.0 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 Biofilm development protein YmgB/AriR Stork_head PF10264.9 CTQ27154.1 - 0.047 13.8 0.0 0.083 13.1 0.0 1.4 1 1 1 2 2 2 0 Winged helix Storkhead-box1 domain EAL PF00563.20 CTQ27155.1 - 2.5e-45 154.9 0.0 3.7e-45 154.3 0.0 1.2 1 0 0 1 1 1 1 EAL domain BLUF PF04940.12 CTQ27155.1 - 4.6e-25 87.6 0.0 7.9e-25 86.8 0.0 1.4 1 0 0 1 1 1 1 Sensors of blue-light using FAD COX5A PF02284.16 CTQ27155.1 - 0.055 13.5 0.2 0.46 10.5 0.0 2.3 2 0 0 2 2 2 0 Cytochrome c oxidase subunit Va MerR_1 PF13411.6 CTQ27156.1 - 3.9e-20 71.7 0.1 1.1e-19 70.2 0.0 1.8 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 CTQ27156.1 - 7.1e-14 51.3 0.0 1.7e-13 50.0 0.0 1.7 1 0 0 1 1 1 1 MerR family regulatory protein HTH_17 PF12728.7 CTQ27156.1 - 6.3e-06 26.3 0.3 4.4e-05 23.6 0.0 2.2 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_Tnp_1 PF01527.20 CTQ27156.1 - 0.00048 20.4 0.8 0.0018 18.5 0.0 2.4 2 1 1 3 3 3 1 Transposase Terminase_5 PF06056.12 CTQ27156.1 - 0.0042 16.9 0.0 0.017 15.0 0.0 2.0 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) MerR_2 PF13591.6 CTQ27156.1 - 0.0053 16.6 0.0 0.013 15.3 0.0 1.6 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_28 PF13518.6 CTQ27156.1 - 0.0055 16.8 0.4 0.02 15.0 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ27156.1 - 0.013 15.3 2.1 0.016 15.0 0.0 2.3 3 0 0 3 3 3 0 Homeodomain-like domain DUF3926 PF13080.6 CTQ27156.1 - 0.17 11.8 0.6 1.5 8.8 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3926) GerE PF00196.19 CTQ27158.1 - 7.3e-09 35.0 0.0 1e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family CENP-B_N PF04218.13 CTQ27158.1 - 0.0026 17.4 0.2 0.0043 16.7 0.2 1.3 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain Intein_splicing PF14890.6 CTQ27158.1 - 0.058 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Intein splicing domain HTH_28 PF13518.6 CTQ27158.1 - 0.16 12.2 0.2 0.44 10.7 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain BDM PF10684.9 CTQ27159.1 - 1.1e-05 25.7 0.0 1.1e-05 25.6 0.0 1.1 1 0 0 1 1 1 1 Putative biofilm-dependent modulation protein YmgB PF10798.8 CTQ27159.1 - 1.3e-05 25.0 0.8 1.5e-05 24.7 0.8 1.1 1 0 0 1 1 1 1 Biofilm development protein YmgB/AriR Tim29 PF10171.9 CTQ27159.1 - 0.007 15.9 0.6 0.0072 15.8 0.6 1.0 1 0 0 1 1 1 1 Translocase of the Inner Mitochondrial membrane 29 ERG2_Sigma1R PF04622.12 CTQ27159.1 - 0.01 15.2 0.3 0.01 15.2 0.3 1.0 1 0 0 1 1 1 0 ERG2 and Sigma1 receptor like protein DUF4451 PF14616.6 CTQ27160.1 - 0.028 14.6 0.1 0.042 14.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4451) Acyl_transf_3 PF01757.22 CTQ27161.1 - 6.4e-14 51.8 37.2 3.7e-10 39.4 27.9 2.0 1 1 1 2 2 2 2 Acyltransferase family Insulin_TMD PF17870.1 CTQ27161.1 - 0.37 10.9 0.1 0.37 10.9 0.1 3.5 4 0 0 4 4 4 0 Insulin receptor trans-membrane segment ACR_tran PF00873.19 CTQ27162.1 - 1.8e-162 542.4 1.2 2.1e-162 542.2 1.2 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 CTQ27162.1 - 0.00067 19.1 4.5 0.00067 19.1 4.5 2.3 2 0 0 2 2 2 2 Protein export membrane protein HlyD_D23 PF16576.5 CTQ27163.1 - 1.5e-09 37.4 1.8 1.5e-09 37.4 1.8 1.9 1 1 1 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 CTQ27163.1 - 4.5e-09 36.0 1.1 5.3e-05 23.0 0.3 2.6 2 0 0 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 CTQ27163.1 - 4.5e-09 36.9 0.4 1.3e-05 25.8 0.0 3.1 3 0 0 3 3 3 2 HlyD family secretion protein Biotin_lipoyl PF00364.22 CTQ27163.1 - 0.001 18.8 0.0 2.1 8.3 0.0 2.6 2 0 0 2 2 2 2 Biotin-requiring enzyme RbcS PF12338.8 CTQ27163.1 - 0.058 13.6 0.5 0.19 12.0 0.1 2.2 2 0 0 2 2 2 0 Ribulose-1,5-bisphosphate carboxylase small subunit Usp PF00582.26 CTQ27165.1 - 4.7e-23 82.3 0.6 5.3e-23 82.1 0.6 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 CTQ27165.1 - 0.0058 16.6 0.1 0.0064 16.5 0.1 1.1 1 0 0 1 1 1 1 DNA photolyase E1-E2_ATPase PF00122.20 CTQ27166.1 - 1e-51 175.0 5.8 1.2e-51 174.8 1.7 2.8 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 CTQ27166.1 - 5.6e-38 130.5 10.9 5.6e-38 130.5 10.9 2.3 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 CTQ27166.1 - 6.3e-21 75.6 2.9 5.4e-20 72.6 2.9 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 CTQ27166.1 - 1e-18 66.8 0.8 3.1e-18 65.2 0.0 2.2 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 CTQ27166.1 - 2.7e-12 46.6 0.0 5.6e-12 45.6 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 CTQ27166.1 - 5.8e-06 26.2 0.9 4e-05 23.5 0.6 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ27166.1 - 0.00025 21.5 0.0 0.00065 20.2 0.0 1.8 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Pectinesterase PF01095.19 CTQ27167.1 - 1.5e-15 56.7 4.0 7.1e-11 41.4 3.1 2.9 3 0 0 3 3 3 2 Pectinesterase Amidohydro_3 PF07969.11 CTQ27168.1 - 2.1e-17 63.8 0.6 5.4e-08 32.7 0.2 2.7 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 CTQ27168.1 - 5.9e-14 52.1 0.0 2.3e-12 46.9 0.0 2.8 1 1 0 1 1 1 1 Amidohydrolase family Arginase PF00491.21 CTQ27169.1 - 6.9e-54 183.2 0.1 1e-53 182.7 0.1 1.2 1 0 0 1 1 1 1 Arginase family DUF2564 PF10819.8 CTQ27169.1 - 0.037 14.4 0.1 0.077 13.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2564) UTRA PF07702.13 CTQ27170.1 - 1.4e-34 119.0 2.3 1.9e-34 118.5 2.3 1.2 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 CTQ27170.1 - 7.7e-24 83.1 0.0 1.4e-23 82.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 CTQ27170.1 - 0.00017 21.3 0.0 0.00039 20.1 0.0 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ27170.1 - 0.0059 16.5 0.0 0.013 15.5 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain RP-C PF03428.13 CTQ27170.1 - 0.007 16.0 0.0 0.023 14.3 0.0 1.8 2 0 0 2 2 2 1 Replication protein C N-terminal domain MarR PF01047.22 CTQ27170.1 - 0.0077 16.1 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 MarR family AbiEi_4 PF13338.6 CTQ27170.1 - 0.017 15.3 0.0 0.051 13.7 0.0 1.8 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin HTH_24 PF13412.6 CTQ27170.1 - 0.025 14.2 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ27170.1 - 0.029 14.3 0.0 0.072 13.0 0.0 1.7 1 0 0 1 1 1 0 MarR family DUF977 PF06163.11 CTQ27170.1 - 0.084 12.8 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) HTH_11 PF08279.12 CTQ27170.1 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_41 PF14502.6 CTQ27170.1 - 0.14 11.9 0.0 0.29 10.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.6 CTQ27170.1 - 0.17 11.8 0.0 0.39 10.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Urocanase_C PF17392.2 CTQ27171.1 - 6.7e-93 309.6 0.3 1e-92 309.0 0.3 1.3 1 0 0 1 1 1 1 Urocanase C-terminal domain Urocanase PF01175.18 CTQ27171.1 - 6.5e-87 290.6 0.0 9.2e-87 290.1 0.0 1.2 1 0 0 1 1 1 1 Urocanase Rossmann-like domain Urocanase_N PF17391.2 CTQ27171.1 - 8.5e-63 209.7 0.0 1.7e-62 208.8 0.0 1.5 1 0 0 1 1 1 1 Urocanase N-terminal domain Lyase_aromatic PF00221.19 CTQ27172.1 - 8.9e-182 604.9 9.0 1e-181 604.7 9.0 1.0 1 0 0 1 1 1 1 Aromatic amino acid lyase AA_permease PF00324.21 CTQ27173.1 - 2.4e-97 326.5 51.4 2.9e-97 326.3 51.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ27173.1 - 1.8e-41 142.4 54.2 2.2e-41 142.1 54.2 1.1 1 0 0 1 1 1 1 Amino acid permease PBP PF01161.20 CTQ27174.1 - 8.8e-39 132.8 0.1 1e-38 132.6 0.1 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Aminotran_3 PF00202.21 CTQ27175.1 - 7.7e-127 423.3 0.0 8.7e-127 423.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.21 CTQ27175.1 - 0.0045 16.3 0.0 0.0069 15.7 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DUF3652 PF12372.8 CTQ27175.1 - 0.036 14.0 1.7 12 5.9 0.1 3.1 3 0 0 3 3 3 0 Huntingtin protein region BATS PF06968.13 CTQ27176.1 - 9.7e-21 73.7 0.0 2.4e-20 72.4 0.0 1.7 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 CTQ27176.1 - 5.5e-19 69.2 0.0 4.7e-18 66.1 0.0 2.3 2 1 0 2 2 2 1 Radical SAM superfamily Aminotran_1_2 PF00155.21 CTQ27177.1 - 1.5e-61 208.6 0.0 1.7e-61 208.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 CTQ27177.1 - 1.8e-06 27.5 0.0 4.5e-06 26.1 0.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 CTQ27177.1 - 5.4e-05 22.3 0.0 0.00011 21.3 0.0 1.4 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 CTQ27177.1 - 0.005 15.4 0.0 0.0071 14.9 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme AA_kinase PF00696.28 CTQ27177.1 - 0.0087 15.7 1.1 0.024 14.3 0.7 1.9 2 1 0 2 2 2 1 Amino acid kinase family DegT_DnrJ_EryC1 PF01041.17 CTQ27177.1 - 0.041 13.2 2.2 0.16 11.2 2.1 1.9 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Methyltransf_11 PF08241.12 CTQ27178.1 - 1.2e-23 83.6 0.0 2.4e-23 82.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ27178.1 - 5e-18 65.6 0.0 1e-17 64.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ27178.1 - 6.6e-14 52.1 0.0 9.3e-14 51.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ27178.1 - 1.3e-10 41.3 0.0 1.8e-10 40.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ27178.1 - 6e-10 39.8 0.0 1e-09 39.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 CTQ27178.1 - 2e-06 27.3 0.0 2.7e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 CTQ27178.1 - 7.3e-05 22.7 0.0 0.00012 22.0 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.14 CTQ27178.1 - 0.0016 18.1 0.1 0.0032 17.0 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase small domain CMAS PF02353.20 CTQ27178.1 - 0.019 14.3 0.0 0.028 13.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_29 PF03141.16 CTQ27178.1 - 0.059 11.9 0.0 0.08 11.5 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase SPAR_C PF11881.8 CTQ27178.1 - 0.065 13.1 0.0 0.097 12.6 0.0 1.2 1 0 0 1 1 1 0 C-terminal domain of SPAR protein FtsJ PF01728.19 CTQ27178.1 - 0.12 12.5 0.0 0.18 11.9 0.0 1.4 1 1 0 1 1 1 0 FtsJ-like methyltransferase TehB PF03848.14 CTQ27178.1 - 0.28 10.6 0.0 0.48 9.8 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB AAA_26 PF13500.6 CTQ27179.1 - 4.6e-37 127.8 0.0 5.7e-37 127.5 0.0 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 CTQ27179.1 - 1.4e-12 47.8 0.0 1.7e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF1611 PF07755.11 CTQ27179.1 - 0.00035 19.9 0.2 0.0048 16.2 0.1 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF1611_C) P-loop domain ABC_tran PF00005.27 CTQ27180.1 - 5.6e-22 78.7 0.0 1.1e-21 77.8 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_16 PF13191.6 CTQ27180.1 - 0.0031 17.9 0.1 0.0053 17.2 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ27180.1 - 0.026 14.8 0.5 0.2 11.9 0.5 2.0 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 CTQ27180.1 - 0.035 14.0 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA_25 PF13481.6 CTQ27180.1 - 0.082 12.5 0.0 0.23 11.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 CTQ27180.1 - 0.22 11.6 0.0 0.36 10.9 0.0 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase UvrB_inter PF17757.1 CTQ27182.1 - 9.6e-32 109.0 0.0 2.3e-31 107.8 0.0 1.7 1 0 0 1 1 1 1 UvrB interaction domain UvrB PF12344.8 CTQ27182.1 - 1.8e-21 75.7 0.3 6.1e-21 74.0 0.0 2.1 2 0 0 2 2 2 1 Ultra-violet resistance protein B Helicase_C PF00271.31 CTQ27182.1 - 5.9e-18 65.2 0.1 3.2e-17 62.9 0.1 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CTQ27182.1 - 1.3e-10 41.5 0.1 2.8e-09 37.2 0.0 2.7 2 1 0 3 3 3 1 Type III restriction enzyme, res subunit UVR PF02151.19 CTQ27182.1 - 3.1e-07 29.9 1.6 8.4e-07 28.5 1.6 1.8 1 0 0 1 1 1 1 UvrB/uvrC motif DEAD PF00270.29 CTQ27182.1 - 0.0004 20.2 0.1 0.01 15.6 0.0 3.1 3 1 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 CTQ27182.1 - 0.00072 19.3 0.0 0.016 14.9 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 CTQ27182.1 - 0.0035 17.7 0.1 2.4 8.5 0.0 2.8 2 1 0 2 2 2 2 AAA domain UB2H PF14814.6 CTQ27182.1 - 0.037 14.1 0.0 0.095 12.7 0.0 1.7 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain UvrD-helicase PF00580.21 CTQ27182.1 - 0.053 13.0 1.0 7.3 6.0 0.0 2.5 3 0 0 3 3 3 0 UvrD/REP helicase N-terminal domain CorA PF01544.18 CTQ27182.1 - 0.72 9.1 3.5 1.6 8.0 0.3 2.4 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein HATPase_c PF02518.26 CTQ27183.1 - 6.8e-14 52.3 0.0 1.2e-13 51.5 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ27183.1 - 1.9e-08 34.2 0.8 1.9e-08 34.2 0.8 2.7 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 CTQ27183.1 - 0.00091 19.6 2.9 0.0028 18.0 0.2 3.2 4 1 0 4 4 4 1 HAMP domain Response_reg PF00072.24 CTQ27184.1 - 1.6e-24 86.2 0.0 2.1e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ27184.1 - 1.2e-20 73.3 0.3 4.2e-20 71.6 0.0 2.0 2 1 0 2 2 2 1 Transcriptional regulatory protein, C terminal DUF1891 PF09004.10 CTQ27184.1 - 0.097 12.3 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1891) Sulfatase PF00884.23 CTQ27185.1 - 5.7e-50 170.5 0.4 7.2e-50 170.1 0.4 1.1 1 0 0 1 1 1 1 Sulfatase EptA_B_N PF08019.12 CTQ27185.1 - 3.2e-39 134.2 9.4 3.2e-39 134.2 9.4 1.7 2 0 0 2 2 2 1 Phosphoethanolamine transferase EptA/EptB UPF0052 PF01933.18 CTQ27186.1 - 1.6e-76 257.4 0.0 1.8e-76 257.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 Cecropin PF00272.19 CTQ27186.1 - 0.077 12.7 0.1 0.22 11.3 0.1 1.8 1 0 0 1 1 1 0 Cecropin family Mob_synth_C PF06463.13 CTQ27188.1 - 1e-38 132.2 0.0 1.7e-38 131.4 0.0 1.4 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 CTQ27188.1 - 6.4e-28 98.2 0.0 9.2e-28 97.7 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 CTQ27188.1 - 1.1e-06 29.0 0.0 2.1e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 CTQ27188.1 - 0.00047 20.3 0.0 0.001 19.2 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF1272 PF06906.11 CTQ27188.1 - 0.045 13.9 2.3 6.8 6.9 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) AhpC-TSA PF00578.21 CTQ27188.1 - 0.057 13.3 0.0 15 5.5 0.0 2.4 2 0 0 2 2 2 0 AhpC/TSA family MoCF_biosynth PF00994.24 CTQ27189.1 - 4e-33 114.1 0.0 4.8e-33 113.9 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoaC PF01967.21 CTQ27190.1 - 2.2e-57 192.9 1.8 2.6e-57 192.7 1.8 1.0 1 0 0 1 1 1 1 MoaC family ThiS PF02597.20 CTQ27191.1 - 1.7e-20 73.4 0.1 1.9e-20 73.3 0.1 1.0 1 0 0 1 1 1 1 ThiS family DUF1586 PF07625.11 CTQ27191.1 - 4 7.6 6.9 3.9 7.6 0.2 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1586) MoaE PF02391.17 CTQ27192.1 - 1.8e-35 121.6 0.0 2.2e-35 121.4 0.0 1.1 1 0 0 1 1 1 1 MoaE protein DAHP_synth_2 PF01474.16 CTQ27192.1 - 0.04 12.4 0.0 0.048 12.2 0.0 1.1 1 0 0 1 1 1 0 Class-II DAHP synthetase family Bax1-I PF01027.20 CTQ27193.1 - 3.4e-59 200.1 37.2 3.9e-59 200.0 37.2 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Caps_synth_CapC PF14102.6 CTQ27193.1 - 0.091 13.2 24.4 6.4 7.2 15.1 2.4 1 1 1 2 2 2 0 Capsule biosynthesis CapC LPG_synthase_TM PF03706.13 CTQ27194.1 - 1.5e-17 64.1 36.8 2.3e-17 63.5 36.8 1.2 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Abhydrolase_9_N PF15420.6 CTQ27194.1 - 0.004 17.2 1.0 0.004 17.2 1.0 2.7 2 1 1 3 3 3 1 Alpha/beta-hydrolase family N-terminus MLANA PF14991.6 CTQ27194.1 - 2.5 8.4 3.5 1.5 9.1 0.1 2.3 2 0 0 2 2 2 0 Protein melan-A PLDc_2 PF13091.6 CTQ27195.1 - 1.6e-40 138.0 0.0 1.1e-24 86.8 0.0 2.1 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 CTQ27195.1 - 4.8e-11 42.4 0.3 1e-06 28.7 0.1 2.5 2 0 0 2 2 2 2 Phospholipase D Active site motif Regulator_TrmB PF11495.8 CTQ27195.1 - 0.00016 20.9 0.0 0.0055 15.9 0.0 2.5 2 1 1 3 3 3 1 Archaeal transcriptional regulator TrmB Glyco_transf_4 PF13439.6 CTQ27195.1 - 0.14 12.2 2.8 2.8 7.9 0.0 3.0 1 1 0 2 2 2 0 Glycosyltransferase Family 4 Exo_endo_phos PF03372.23 CTQ27196.1 - 2.9e-15 56.4 0.2 3.9e-15 56.0 0.2 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 CTQ27196.1 - 0.11 12.3 0.0 0.59 10.0 0.0 2.0 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase YbhQ PF11076.8 CTQ27197.1 - 1.5e-71 238.6 9.3 1.7e-71 238.4 9.3 1.0 1 0 0 1 1 1 1 Putative inner membrane protein YbhQ Aa_trans PF01490.18 CTQ27197.1 - 0.025 13.3 1.3 0.031 13.0 1.3 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein PSII_Ycf12 PF05969.11 CTQ27197.1 - 0.036 14.0 5.7 0.036 14.0 5.7 2.2 2 0 0 2 2 2 0 Photosystem II complex subunit Ycf12 ABC2_membrane_3 PF12698.7 CTQ27198.1 - 2.2e-46 158.6 13.5 2.6e-46 158.3 13.5 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 CTQ27198.1 - 8.1e-36 123.4 13.2 8.9e-35 120.0 9.8 2.2 2 0 0 2 2 2 2 ABC-2 type transporter ABC2_membrane_2 PF12679.7 CTQ27198.1 - 6.6e-27 94.5 8.6 7.9e-27 94.3 8.6 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 CTQ27198.1 - 3.7e-05 23.8 10.5 3.7e-05 23.8 10.5 2.2 2 1 0 2 2 2 1 ABC-2 family transporter protein CcmB PF03379.13 CTQ27198.1 - 0.1 12.1 9.7 0.33 10.4 4.4 2.3 2 0 0 2 2 2 0 CcmB protein Arv1 PF04161.13 CTQ27198.1 - 3.4 7.8 5.9 0.89 9.7 0.4 2.5 3 0 0 3 3 3 0 Arv1-like family DUF373 PF04123.13 CTQ27198.1 - 7.5 5.9 12.1 11 5.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF373) ABC2_membrane_3 PF12698.7 CTQ27199.1 - 7e-38 130.6 15.6 8e-38 130.4 15.6 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 CTQ27199.1 - 1.6e-37 129.4 11.7 1.9e-37 129.1 11.7 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 CTQ27199.1 - 5.5e-23 81.5 34.9 7.4e-22 77.8 21.9 3.0 2 1 1 3 3 3 2 ABC-2 type transporter ABC2_membrane_4 PF12730.7 CTQ27199.1 - 0.0061 16.5 16.8 0.0061 16.5 16.8 2.6 2 1 1 3 3 3 1 ABC-2 family transporter protein DUF5326 PF17260.2 CTQ27199.1 - 0.85 9.8 0.0 0.85 9.8 0.0 4.0 5 0 0 5 5 5 0 Family of unknown function (DUF5326) ABC_tran PF00005.27 CTQ27200.1 - 4.3e-56 189.2 0.0 8.6e-28 97.6 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ27200.1 - 1.6e-18 67.6 1.0 4.2e-05 23.5 0.0 4.2 3 1 0 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 CTQ27200.1 - 1.7e-07 32.0 0.5 0.0026 18.3 0.1 2.3 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 CTQ27200.1 - 2.1e-07 30.5 0.7 0.0052 16.5 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_22 PF13401.6 CTQ27200.1 - 1.2e-05 25.6 0.0 0.0066 16.7 0.0 3.1 3 1 0 3 3 3 1 AAA domain AAA_27 PF13514.6 CTQ27200.1 - 0.00028 20.6 0.2 0.01 15.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 CTQ27200.1 - 0.00029 20.6 0.2 0.049 13.3 0.0 2.6 2 0 0 2 2 2 1 AAA domain MukB PF04310.12 CTQ27200.1 - 0.00037 20.4 0.3 0.68 9.7 0.0 2.3 2 0 0 2 2 2 2 MukB N-terminal AAA_16 PF13191.6 CTQ27200.1 - 0.00059 20.3 0.2 0.11 12.8 0.0 3.0 3 0 0 3 3 3 1 AAA ATPase domain SRP54 PF00448.22 CTQ27200.1 - 0.00085 19.0 0.6 0.39 10.3 0.0 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA PF00004.29 CTQ27200.1 - 0.00094 19.6 0.9 0.47 10.9 0.1 3.4 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 CTQ27200.1 - 0.0015 18.3 0.6 0.63 9.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 CTQ27200.1 - 0.0022 17.9 0.1 1.3 8.9 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase Rad17 PF03215.15 CTQ27200.1 - 0.0023 17.9 0.0 0.23 11.3 0.0 2.2 2 0 0 2 2 2 1 Rad17 P-loop domain CLP1_P PF16575.5 CTQ27200.1 - 0.0036 17.1 0.0 1.4 8.7 0.0 2.3 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop Cdc6_C PF09079.11 CTQ27200.1 - 0.0043 17.0 0.0 1.9 8.5 0.0 2.5 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain MMR_HSR1 PF01926.23 CTQ27200.1 - 0.0054 16.8 0.6 5.4 7.1 0.0 3.2 3 0 0 3 3 3 0 50S ribosome-binding GTPase MeaB PF03308.16 CTQ27200.1 - 0.0059 15.6 1.0 0.76 8.7 0.1 2.3 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Mg_chelatase PF01078.21 CTQ27200.1 - 0.0063 15.9 2.3 1.8 7.9 0.1 2.9 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 CTQ27200.1 - 0.0098 16.1 0.6 0.74 10.0 0.0 2.5 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 CTQ27200.1 - 0.012 15.9 0.1 5.1 7.5 0.0 2.7 2 0 0 2 2 2 0 RNA helicase cobW PF02492.19 CTQ27200.1 - 0.013 15.1 0.8 0.096 12.3 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.23 CTQ27200.1 - 0.014 15.4 0.0 0.31 11.1 0.0 2.4 2 2 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_15 PF13175.6 CTQ27200.1 - 0.019 14.7 0.0 3.1 7.4 0.0 2.9 3 0 0 3 3 3 0 AAA ATPase domain TsaE PF02367.17 CTQ27200.1 - 0.02 14.9 0.4 1.6 8.8 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_5 PF07728.14 CTQ27200.1 - 0.026 14.5 2.2 1.9 8.5 0.1 3.2 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 CTQ27200.1 - 0.028 13.9 0.0 2.2 7.8 0.0 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region SMC_N PF02463.19 CTQ27200.1 - 0.044 13.2 0.0 5.4 6.4 0.0 2.8 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA_14 PF13173.6 CTQ27200.1 - 0.046 13.7 0.0 9.5 6.3 0.0 3.4 3 0 0 3 3 3 0 AAA domain Thymidylate_kin PF02223.17 CTQ27200.1 - 0.048 13.3 0.2 0.73 9.5 0.0 2.5 2 0 0 2 2 2 0 Thymidylate kinase ATP_bind_1 PF03029.17 CTQ27200.1 - 0.057 13.2 0.3 1.2 8.8 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein SbcCD_C PF13558.6 CTQ27200.1 - 0.08 13.2 0.0 36 4.7 0.0 3.4 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit DUF87 PF01935.17 CTQ27200.1 - 0.12 12.5 0.4 6.1 6.9 0.1 2.3 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_28 PF13521.6 CTQ27200.1 - 0.13 12.5 0.7 2.6 8.2 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 CTQ27200.1 - 0.13 12.8 1.0 3 8.4 0.0 2.6 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 CTQ27200.1 - 0.13 12.1 0.5 6.1 6.7 0.0 2.7 3 0 0 3 3 3 0 NTPase NACHT PF05729.12 CTQ27200.1 - 0.24 11.3 1.2 1.1 9.1 0.1 2.4 2 0 0 2 2 2 0 NACHT domain AAA_25 PF13481.6 CTQ27200.1 - 1.6 8.3 4.3 2 7.9 0.2 2.6 3 0 0 3 3 2 0 AAA domain HlyD_D23 PF16576.5 CTQ27201.1 - 2.6e-19 69.3 5.7 3.2e-18 65.7 5.7 2.5 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 CTQ27201.1 - 1e-16 61.5 0.0 4.1e-13 50.0 0.0 3.0 2 1 1 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 CTQ27201.1 - 6.7e-11 41.8 0.0 6.7e-11 41.8 0.0 3.3 4 1 0 4 4 4 1 Biotin-lipoyl like OEP PF02321.18 CTQ27201.1 - 0.003 17.4 30.9 0.0047 16.8 21.8 2.7 1 1 1 2 2 2 1 Outer membrane efflux protein Biotin_lipoyl PF00364.22 CTQ27201.1 - 0.044 13.6 0.0 2.1 8.2 0.0 2.3 2 0 0 2 2 2 0 Biotin-requiring enzyme PI3K_P85_iSH2 PF16454.5 CTQ27201.1 - 0.056 13.0 2.8 0.085 12.5 2.8 1.2 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Big_1 PF02369.16 CTQ27201.1 - 0.083 12.9 0.0 0.39 10.7 0.0 2.2 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 1) Peptidase_M23 PF01551.22 CTQ27201.1 - 0.14 12.4 0.0 0.68 10.2 0.0 2.0 2 0 0 2 2 2 0 Peptidase family M23 TFIIA PF03153.13 CTQ27201.1 - 0.3 11.0 4.9 0.35 10.8 4.9 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit TetR_C_32 PF09209.11 CTQ27202.1 - 4.1e-38 130.2 1.1 8.9e-38 129.1 1.1 1.6 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 CTQ27202.1 - 1.2e-12 47.3 0.6 1.2e-12 47.3 0.6 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family PAC3 PF10178.9 CTQ27202.1 - 0.027 14.6 0.0 0.071 13.3 0.0 1.7 1 0 0 1 1 1 0 Proteasome assembly chaperone 3 LysR_substrate PF03466.20 CTQ27203.1 - 2.4e-26 92.4 0.1 3.3e-26 92.0 0.1 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27203.1 - 1.7e-19 69.5 0.4 2.2e-18 65.9 0.5 2.2 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family MFS_1 PF07690.16 CTQ27204.1 - 1.3e-65 221.7 58.6 1.8e-53 181.7 36.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ27204.1 - 2.9e-07 30.1 20.0 1.4e-05 24.6 4.7 2.5 2 1 0 2 2 2 2 Uncharacterised MFS-type transporter YbfB Sugar_tr PF00083.24 CTQ27204.1 - 4.2e-05 22.6 37.6 8.6e-05 21.6 14.8 2.6 1 1 0 2 2 2 2 Sugar (and other) transporter DUF4381 PF14316.6 CTQ27204.1 - 0.044 14.0 0.7 0.086 13.1 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) DUF1129 PF06570.11 CTQ27204.1 - 5.6 6.4 8.1 0.36 10.3 2.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) adh_short_C2 PF13561.6 CTQ27205.1 - 7.3e-67 225.3 4.7 8.4e-67 225.1 4.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27205.1 - 2.1e-53 180.7 2.9 2.6e-53 180.4 2.9 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ27205.1 - 1.6e-08 34.6 3.4 3.1e-08 33.7 3.4 1.4 1 1 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 CTQ27205.1 - 0.027 14.4 0.3 0.043 13.7 0.3 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Transketolase_N PF00456.21 CTQ27206.1 - 4.1e-41 141.0 0.1 7.3e-41 140.2 0.1 1.3 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain E1_dh PF00676.20 CTQ27206.1 - 7e-05 21.9 0.0 8.4e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 CTQ27206.1 - 0.00094 18.5 0.2 0.14 11.3 0.2 2.4 2 1 1 3 3 3 2 1-deoxy-D-xylulose-5-phosphate synthase FR47 PF08445.10 CTQ27206.1 - 0.086 12.8 0.1 0.39 10.7 0.0 2.0 2 0 0 2 2 2 0 FR47-like protein Transket_pyr PF02779.24 CTQ27207.1 - 8.4e-32 110.3 0.2 1.4e-31 109.5 0.2 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 CTQ27207.1 - 9.5e-28 96.6 0.1 1.6e-27 95.8 0.1 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain PFOR_II PF17147.4 CTQ27207.1 - 0.0045 17.3 0.0 0.0086 16.4 0.0 1.4 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II DEAD PF00270.29 CTQ27209.1 - 3.5e-50 170.2 0.0 8.9e-50 168.9 0.0 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CTQ27209.1 - 1.7e-26 92.7 0.0 6.3e-26 90.9 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CTQ27209.1 - 3.5e-07 30.4 0.0 6.6e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 CTQ27209.1 - 0.00032 21.0 0.0 0.1 12.9 0.0 2.4 2 0 0 2 2 2 2 AAA domain UTP25 PF06862.12 CTQ27209.1 - 0.023 13.5 0.0 1.7 7.3 0.0 3.1 2 1 1 3 3 3 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 UvrD-helicase PF00580.21 CTQ27209.1 - 0.07 12.6 0.0 1 8.8 0.0 1.9 1 1 1 2 2 2 0 UvrD/REP helicase N-terminal domain AAA_22 PF13401.6 CTQ27209.1 - 0.52 10.6 3.1 2.5 8.4 1.7 2.7 2 1 0 2 2 2 0 AAA domain Helicase_C_2 PF13307.6 CTQ27210.1 - 1.9e-25 90.0 0.0 3.4e-25 89.2 0.0 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 CTQ27210.1 - 5.8e-08 32.6 0.0 1e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 DEAD_2 DEAD PF00270.29 CTQ27210.1 - 1.5e-07 31.4 0.1 1.8e-05 24.6 0.0 3.2 4 0 0 4 4 4 1 DEAD/DEAH box helicase ResIII PF04851.15 CTQ27210.1 - 5.6e-07 29.7 0.0 8e-06 26.0 0.0 2.2 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 CTQ27210.1 - 0.088 13.1 0.5 9.1 6.6 0.0 3.2 3 0 0 3 3 3 0 AAA domain Glycos_trans_3N PF02885.17 CTQ27211.1 - 9.9e-10 38.1 0.1 1.7e-09 37.3 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain DUF1471 PF07338.13 CTQ27212.1 - 3.8e-17 62.0 1.3 6.5e-17 61.2 1.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) zf-dskA_traR PF01258.17 CTQ27213.1 - 2.7e-15 56.0 4.1 4.2e-15 55.4 4.1 1.3 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger DZR PF12773.7 CTQ27213.1 - 2.6e-05 24.2 0.8 3.7e-05 23.7 0.8 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 CTQ27213.1 - 0.0077 15.9 2.4 0.1 12.4 0.3 2.3 2 0 0 2 2 2 1 zinc-ribbon domain zf_UBZ PF18439.1 CTQ27213.1 - 0.012 15.2 0.2 0.012 15.2 0.2 1.9 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger C1_1 PF00130.22 CTQ27213.1 - 0.017 15.0 0.5 0.027 14.3 0.5 1.4 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Auto_anti-p27 PF06677.12 CTQ27213.1 - 0.037 14.2 1.4 0.058 13.6 1.4 1.3 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF3811 PF11656.8 CTQ27213.1 - 0.063 13.7 0.0 0.077 13.4 0.0 1.1 1 0 0 1 1 1 0 YjbD family (DUF3811) Nudix_N_2 PF14803.6 CTQ27213.1 - 0.069 13.1 2.7 0.29 11.1 0.1 2.6 3 0 0 3 3 3 0 Nudix N-terminal zf-ribbon_3 PF13248.6 CTQ27213.1 - 0.17 11.3 2.2 0.57 9.7 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF1471 PF07338.13 CTQ27214.1 - 2.3e-13 49.9 0.2 3.3e-13 49.4 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF5437 PF17505.2 CTQ27214.1 - 5.2 7.2 6.9 7.9 6.6 2.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5437) Flavin_Reduct PF01613.18 CTQ27215.1 - 5.1e-17 62.3 0.0 6.8e-17 61.9 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain MKT1_N PF12247.8 CTQ27215.1 - 0.043 14.2 0.0 0.078 13.3 0.0 1.3 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication Methyltransf_10 PF05971.12 CTQ27216.1 - 1.8e-142 474.0 0.0 2.1e-142 473.8 0.0 1.0 1 0 0 1 1 1 1 RNA methyltransferase MTS PF05175.14 CTQ27216.1 - 3.5e-05 23.4 0.0 8.5e-05 22.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 CTQ27216.1 - 0.055 13.3 0.1 0.15 11.8 0.0 1.9 3 0 0 3 3 3 0 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ27216.1 - 0.056 14.2 0.0 0.12 13.1 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain MS_channel PF00924.18 CTQ27217.1 - 2e-42 145.1 0.8 4.7e-42 143.9 0.8 1.7 1 0 0 1 1 1 1 Mechanosensitive ion channel ABC_tran PF00005.27 CTQ27218.1 - 2.1e-37 128.7 0.0 2.8e-37 128.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ27218.1 - 5.5e-11 42.8 0.0 1.1e-05 25.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ27218.1 - 3.2e-09 36.6 0.2 4.1e-05 23.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ27218.1 - 5e-05 23.8 0.2 0.00011 22.7 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ27218.1 - 5.1e-05 22.9 0.0 9.5e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ27218.1 - 0.00016 21.5 0.0 0.02 14.6 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 CTQ27218.1 - 0.00029 21.4 0.1 0.00055 20.5 0.1 1.4 1 0 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 CTQ27218.1 - 0.00057 18.8 0.1 0.46 9.2 0.1 2.3 2 1 0 2 2 2 2 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 CTQ27218.1 - 0.00072 19.5 0.1 0.0014 18.5 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 CTQ27218.1 - 0.00093 19.0 0.4 0.0031 17.2 0.4 1.9 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ27218.1 - 0.0018 18.6 0.1 0.0041 17.4 0.1 1.9 1 1 0 1 1 1 1 AAA domain RNA12 PF10443.9 CTQ27218.1 - 0.0049 15.7 0.0 0.0073 15.1 0.0 1.3 1 0 0 1 1 1 1 RNA12 protein AAA_18 PF13238.6 CTQ27218.1 - 0.0055 17.2 0.0 0.01 16.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain CobU PF02283.16 CTQ27218.1 - 0.0056 16.3 0.5 0.095 12.3 0.0 2.3 1 1 0 2 2 2 1 Cobinamide kinase / cobinamide phosphate guanyltransferase Rad17 PF03215.15 CTQ27218.1 - 0.0064 16.4 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_33 PF13671.6 CTQ27218.1 - 0.0077 16.4 0.1 0.018 15.2 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.6 CTQ27218.1 - 0.012 14.3 0.0 1.5 7.4 0.0 2.0 1 1 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 CTQ27218.1 - 0.014 15.3 0.0 0.026 14.5 0.0 1.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 CTQ27218.1 - 0.018 14.8 0.0 0.55 9.9 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein cobW PF02492.19 CTQ27218.1 - 0.024 14.3 0.1 0.064 12.8 0.0 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.6 CTQ27218.1 - 0.031 13.8 0.1 0.27 10.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 CTQ27218.1 - 0.034 14.4 0.2 0.6 10.4 0.1 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_27 PF13514.6 CTQ27218.1 - 0.042 13.4 0.0 0.085 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ27218.1 - 0.055 13.4 0.0 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 NACHT domain NTPase_1 PF03266.15 CTQ27218.1 - 0.064 13.2 0.1 0.24 11.3 0.0 1.8 2 0 0 2 2 2 0 NTPase AAA_19 PF13245.6 CTQ27218.1 - 0.069 13.5 0.3 0.2 12.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 CTQ27218.1 - 0.073 12.8 0.2 0.14 11.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 CTQ27218.1 - 0.078 12.1 0.0 0.15 11.3 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain Sigma54_activat PF00158.26 CTQ27218.1 - 0.11 12.2 0.0 0.3 10.8 0.0 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain ATPase PF06745.13 CTQ27218.1 - 0.13 11.6 0.1 2.3 7.5 0.0 2.3 2 0 0 2 2 2 0 KaiC CPT PF07931.12 CTQ27218.1 - 0.14 12.0 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_28 PF13521.6 CTQ27218.1 - 0.14 12.4 0.0 0.42 10.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 CTQ27218.1 - 0.15 12.1 0.0 0.49 10.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 CTQ27219.1 - 1.3e-24 87.0 14.6 1.8e-24 86.5 14.6 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component MgtE PF01769.16 CTQ27219.1 - 1.7 9.0 11.6 1.9 8.9 6.6 2.2 2 0 0 2 2 2 0 Divalent cation transporter SBP_bac_3 PF00497.20 CTQ27220.1 - 7.8e-71 238.1 1.6 8.9e-71 237.9 1.6 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ27220.1 - 9.4e-13 48.4 0.1 4.8e-11 42.9 0.1 2.4 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 CTQ27220.1 - 0.00022 21.2 0.5 0.0014 18.6 0.5 2.2 1 1 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 CTQ27220.1 - 0.00028 20.6 0.0 0.0024 17.5 0.0 2.3 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Ferritin PF00210.24 CTQ27221.1 - 1.3e-22 80.3 0.6 1.5e-22 80.1 0.6 1.1 1 0 0 1 1 1 1 Ferritin-like domain IQ_SEC7_PH PF16453.5 CTQ27221.1 - 0.0012 18.8 0.1 0.0029 17.6 0.1 1.8 1 1 0 1 1 1 1 PH domain T7SS_ESX_EspC PF10824.8 CTQ27221.1 - 0.037 14.5 0.8 1.2 9.7 0.2 2.2 2 0 0 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm Tht1 PF04163.12 CTQ27221.1 - 0.071 11.9 0.5 0.55 8.9 0.0 1.9 1 1 1 2 2 2 0 Tht1-like nuclear fusion protein EamA PF00892.20 CTQ27222.1 - 2.7e-22 79.4 33.8 4.6e-18 65.7 12.5 2.2 2 0 0 2 2 2 2 EamA-like transporter family DUF4567 PF15131.6 CTQ27222.1 - 0.067 13.2 1.7 0.37 10.9 0.5 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4567) ATP19 PF11022.8 CTQ27222.1 - 0.61 10.5 3.5 6.3 7.3 0.1 3.4 3 1 1 4 4 4 0 ATP synthase subunit K TPT PF03151.16 CTQ27222.1 - 4.2 6.6 7.0 0.43 9.9 0.7 2.3 3 0 0 3 3 3 0 Triose-phosphate Transporter family OMP_b-brl PF13505.6 CTQ27223.1 - 7.1e-25 88.2 18.1 8.7e-25 87.9 18.1 1.0 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain Ail_Lom PF06316.11 CTQ27223.1 - 4.5e-23 82.0 5.7 1.2e-13 51.2 1.9 2.3 1 1 1 2 2 2 2 Enterobacterial Ail/Lom protein PGG PF13962.6 CTQ27223.1 - 0.0045 16.8 0.3 0.0066 16.3 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function Phenol_MetA_deg PF13557.6 CTQ27223.1 - 0.021 14.8 12.7 0.025 14.6 12.7 1.1 1 0 0 1 1 1 0 Putative MetA-pathway of phenol degradation DUF3575 PF12099.8 CTQ27223.1 - 0.1 11.9 3.4 0.12 11.6 2.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3575) Sulfatase PF00884.23 CTQ27224.1 - 1.5e-39 136.2 3.0 1.9e-39 135.9 3.0 1.1 1 0 0 1 1 1 1 Sulfatase Fe_dep_repr_C PF02742.15 CTQ27226.1 - 5.2e-14 52.1 0.1 1.1e-13 51.0 0.1 1.6 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 CTQ27226.1 - 6e-10 39.2 0.0 1.3e-09 38.1 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 CTQ27226.1 - 1.4e-06 28.2 0.1 3.7e-05 23.6 0.0 2.2 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 CTQ27226.1 - 5.6e-06 26.2 0.2 1.5e-05 24.8 0.1 1.7 1 1 0 1 1 1 1 MarR family MarR PF01047.22 CTQ27226.1 - 7.3e-06 25.8 0.0 1.6e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 MarR family GntR PF00392.21 CTQ27226.1 - 9e-05 22.1 0.3 0.00041 19.9 0.1 2.2 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 CTQ27226.1 - 0.00016 21.5 0.0 0.00027 20.8 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 CTQ27226.1 - 0.00019 20.9 0.0 0.00031 20.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 CTQ27226.1 - 0.00054 19.7 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain AbiEi_4 PF13338.6 CTQ27226.1 - 0.0016 18.6 0.1 0.0038 17.3 0.0 1.8 1 1 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin YdaS_antitoxin PF15943.5 CTQ27226.1 - 0.0032 17.3 0.0 0.0095 15.8 0.0 1.8 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_20 PF12840.7 CTQ27226.1 - 0.0039 17.2 0.0 0.0081 16.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_1 PF00126.27 CTQ27226.1 - 0.005 16.8 0.1 0.018 15.0 0.1 2.0 1 1 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF2250 PF10007.9 CTQ27226.1 - 0.0063 16.6 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_50 PF18024.1 CTQ27226.1 - 0.0064 16.1 0.0 0.016 14.8 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 CTQ27226.1 - 0.012 15.6 0.0 0.02 14.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_DeoR PF08220.12 CTQ27226.1 - 0.013 15.2 0.3 0.89 9.3 0.0 2.6 3 0 0 3 3 2 0 DeoR-like helix-turn-helix domain HTH_27 PF13463.6 CTQ27226.1 - 0.013 15.9 0.2 0.35 11.4 0.0 2.6 2 1 0 2 2 2 0 Winged helix DNA-binding domain HTH_5 PF01022.20 CTQ27226.1 - 0.017 15.0 0.0 0.033 14.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_37 PF13744.6 CTQ27226.1 - 0.019 14.9 0.1 0.049 13.6 0.0 1.7 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 CTQ27226.1 - 0.025 14.4 0.1 0.058 13.2 0.1 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_23 PF13384.6 CTQ27226.1 - 0.027 14.3 0.0 0.096 12.5 0.0 2.1 2 0 0 2 2 2 0 Homeodomain-like domain HTH_45 PF14947.6 CTQ27226.1 - 0.033 14.2 0.0 0.054 13.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_31 PF13560.6 CTQ27226.1 - 0.042 14.2 0.2 0.18 12.1 0.1 2.0 2 1 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.20 CTQ27226.1 - 0.056 13.8 0.0 0.11 12.9 0.0 1.6 1 1 0 1 1 1 0 Transcriptional regulator STD1 PF17235.2 CTQ27226.1 - 0.062 12.9 0.0 0.12 12.1 0.0 1.5 1 1 1 2 2 2 0 STD1/MTH1 TFIIE_alpha PF02002.17 CTQ27226.1 - 0.063 13.1 0.1 0.15 12.0 0.0 1.7 2 0 0 2 2 2 0 TFIIE alpha subunit HTH_38 PF13936.6 CTQ27226.1 - 0.067 13.0 0.0 0.21 11.4 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_6 PF01418.17 CTQ27226.1 - 0.069 13.1 0.0 0.23 11.5 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family HTH_29 PF13551.6 CTQ27226.1 - 0.079 13.0 0.0 0.18 11.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix KORA PF16509.5 CTQ27226.1 - 0.081 13.2 0.2 0.22 11.8 0.1 1.8 1 1 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_47 PF16221.5 CTQ27226.1 - 0.093 12.3 0.1 0.16 11.6 0.1 1.5 1 0 0 1 1 1 0 winged helix-turn-helix DUF2089 PF09862.9 CTQ27226.1 - 0.12 12.4 0.0 0.34 11.0 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2089) HTH_10 PF04967.12 CTQ27226.1 - 0.13 12.1 0.0 0.28 11.0 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain CitMHS PF03600.16 CTQ27227.1 - 1.6e-23 83.4 36.6 1.6e-23 83.4 36.6 1.7 1 1 1 2 2 2 1 Citrate transporter DUF373 PF04123.13 CTQ27227.1 - 5.1 6.4 18.5 0.017 14.6 3.1 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF373) Glyco_hydro_1 PF00232.18 CTQ27228.1 - 1.6e-116 389.4 1.1 1.8e-116 389.2 1.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Cellulase PF00150.18 CTQ27228.1 - 0.0016 17.9 0.0 0.0026 17.2 0.0 1.3 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) UTRA PF07702.13 CTQ27229.1 - 1.6e-29 102.6 0.0 3.2e-29 101.6 0.0 1.4 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 CTQ27229.1 - 6.6e-17 60.9 0.0 1.1e-16 60.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family TNF PF00229.18 CTQ27229.1 - 0.017 15.1 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 TNF(Tumour Necrosis Factor) family HTH_41 PF14502.6 CTQ27229.1 - 0.027 14.2 0.4 0.066 12.9 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.20 CTQ27229.1 - 0.033 14.5 0.0 0.061 13.7 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_Crp_2 PF13545.6 CTQ27229.1 - 0.17 11.9 0.0 0.38 10.7 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Ldt_C PF17969.1 CTQ27230.1 - 1.4e-24 86.6 0.3 3.2e-24 85.4 0.3 1.7 1 0 0 1 1 1 1 L,D-transpeptidase C-terminal domain YkuD PF03734.14 CTQ27230.1 - 5e-17 62.7 0.0 9e-17 61.8 0.0 1.4 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain Y_phosphatase3 PF13350.6 CTQ27231.1 - 1.6e-56 191.9 0.0 1.8e-56 191.7 0.0 1.0 1 0 0 1 1 1 1 Tyrosine phosphatase family ABC_tran PF00005.27 CTQ27232.1 - 3.1e-47 160.5 0.0 2.4e-24 86.4 0.0 2.6 2 0 0 2 2 2 2 ABC transporter ABC_tran_Xtn PF12848.7 CTQ27232.1 - 3.4e-24 84.7 2.2 3.9e-21 74.9 1.6 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ27232.1 - 2.9e-11 43.7 15.1 0.00072 19.5 0.1 4.7 4 1 0 5 5 5 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ27232.1 - 3e-07 30.1 10.6 0.06 12.8 0.9 4.3 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ27232.1 - 4.4e-07 29.5 0.8 0.029 14.1 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ27232.1 - 4.2e-06 26.8 0.5 0.0052 16.7 0.0 2.6 3 0 0 3 3 2 2 RsgA GTPase RNA_helicase PF00910.22 CTQ27232.1 - 2.9e-05 24.4 0.0 0.15 12.4 0.0 2.6 2 0 0 2 2 2 2 RNA helicase MMR_HSR1 PF01926.23 CTQ27232.1 - 3.1e-05 24.0 0.0 0.037 14.1 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_18 PF13238.6 CTQ27232.1 - 0.00014 22.4 0.0 0.097 13.2 0.0 2.8 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.17 CTQ27232.1 - 0.00015 21.9 4.3 0.11 12.6 0.1 3.7 4 0 0 4 4 4 1 Helicase HerA, central domain AAA_24 PF13479.6 CTQ27232.1 - 0.00016 21.4 0.6 0.31 10.7 0.1 2.7 2 0 0 2 2 2 2 AAA domain MeaB PF03308.16 CTQ27232.1 - 0.00023 20.3 2.6 0.022 13.8 0.0 2.7 3 0 0 3 3 3 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 CTQ27232.1 - 0.00026 21.0 0.0 0.14 12.2 0.0 3.5 4 0 0 4 4 3 1 AAA domain AAA_28 PF13521.6 CTQ27232.1 - 0.00075 19.8 0.0 0.42 10.9 0.0 2.7 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 CTQ27232.1 - 0.002 17.5 1.2 0.27 10.6 0.0 2.4 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_33 PF13671.6 CTQ27232.1 - 0.0026 17.9 0.2 3.5 7.8 0.0 2.8 3 0 0 3 3 3 1 AAA domain MukB PF04310.12 CTQ27232.1 - 0.0034 17.2 0.1 0.4 10.5 0.0 2.4 2 0 0 2 2 2 1 MukB N-terminal NACHT PF05729.12 CTQ27232.1 - 0.0047 16.9 3.1 0.36 10.7 0.3 2.7 2 1 0 2 2 2 1 NACHT domain AAA_22 PF13401.6 CTQ27232.1 - 0.0075 16.5 3.5 0.55 10.5 0.3 3.6 3 1 0 3 3 3 1 AAA domain AAA_16 PF13191.6 CTQ27232.1 - 0.0092 16.4 0.0 0.53 10.6 0.0 2.7 3 0 0 3 3 2 1 AAA ATPase domain SbcCD_C PF13558.6 CTQ27232.1 - 0.014 15.6 0.2 12 6.2 0.0 3.3 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 CTQ27232.1 - 0.022 14.5 0.1 3.1 7.5 0.0 2.7 2 1 0 2 2 2 0 AAA domain NB-ARC PF00931.22 CTQ27232.1 - 0.023 13.9 3.3 0.029 13.6 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain AAA_7 PF12775.7 CTQ27232.1 - 0.025 14.1 0.9 0.25 10.9 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA PF00004.29 CTQ27232.1 - 0.027 14.9 0.2 6.4 7.2 0.1 3.3 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) ATP_bind_1 PF03029.17 CTQ27232.1 - 0.05 13.4 0.3 5.4 6.7 0.0 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 CTQ27232.1 - 0.084 12.9 1.8 2 8.5 0.0 2.7 3 0 0 3 3 2 0 Dynamin family Roc PF08477.13 CTQ27232.1 - 0.085 13.1 2.6 0.56 10.4 0.1 2.8 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase BRE1 PF08647.11 CTQ27232.1 - 0.1 12.7 3.7 0.21 11.7 3.7 1.4 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase VirE PF05272.11 CTQ27232.1 - 0.11 12.2 0.1 8.7 6.0 0.0 3.0 3 0 0 3 3 3 0 Virulence-associated protein E Septin PF00735.18 CTQ27232.1 - 0.13 11.5 0.1 2.9 7.1 0.0 2.3 2 0 0 2 2 2 0 Septin CLP1_P PF16575.5 CTQ27232.1 - 0.15 11.8 0.9 10 5.9 0.0 2.7 3 0 0 3 3 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_17 PF13207.6 CTQ27232.1 - 0.21 12.0 1.3 7.6 7.0 0.1 2.8 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 CTQ27232.1 - 0.21 11.3 12.0 0.27 10.9 0.8 3.3 3 1 0 4 4 3 0 AAA ATPase domain TrwB_AAD_bind PF10412.9 CTQ27232.1 - 0.34 9.8 2.1 1.6 7.6 0.1 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_23 PF13476.6 CTQ27232.1 - 0.4 11.1 14.1 0.71 10.3 0.7 3.2 2 1 0 3 3 3 0 AAA domain AAA_25 PF13481.6 CTQ27232.1 - 0.42 10.2 1.5 6.1 6.4 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_5 PF07728.14 CTQ27232.1 - 0.92 9.5 3.2 60 3.6 0.1 3.7 4 0 0 4 4 4 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 CTQ27232.1 - 1.5 8.7 5.9 0.81 9.6 0.1 3.1 5 0 0 5 5 2 0 NTPase Glyco_hydro_31 PF01055.26 CTQ27233.1 - 3.2e-117 392.4 2.0 4.3e-117 392.0 2.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 CTQ27233.1 - 1e-23 83.4 0.1 3.3e-23 81.8 0.1 2.0 1 0 0 1 1 1 1 Galactose mutarotase-like DUF5110 PF17137.4 CTQ27233.1 - 4.1e-08 33.4 0.0 2.2e-07 31.1 0.0 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF5110) DUF4968 PF16338.5 CTQ27233.1 - 2.7e-06 27.6 0.0 5.1e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4968) MFS_1 PF07690.16 CTQ27234.1 - 1e-58 199.0 56.5 1.8e-55 188.3 35.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ27234.1 - 1.7e-08 33.8 26.1 1.5e-07 30.7 8.4 2.4 2 0 0 2 2 2 2 Sugar (and other) transporter Peripla_BP_3 PF13377.6 CTQ27235.1 - 4.3e-27 95.5 1.3 2.2e-26 93.2 0.1 2.5 2 1 0 3 3 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ27235.1 - 4.4e-13 49.3 0.0 6.7e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 CTQ27235.1 - 9.4e-07 28.5 0.3 2.2e-06 27.4 0.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_IclR PF09339.10 CTQ27235.1 - 3.2e-05 23.6 0.2 0.00012 21.8 0.1 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 CTQ27235.1 - 8.9e-05 22.3 0.0 0.00028 20.7 0.0 1.9 1 0 0 1 1 1 1 MarR family HTH_31 PF13560.6 CTQ27235.1 - 0.00042 20.6 0.2 0.0013 19.0 0.2 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ27235.1 - 0.00052 20.0 0.0 0.0011 19.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_29 PF13551.6 CTQ27235.1 - 0.0014 18.6 0.0 0.02 14.9 0.0 2.8 3 0 0 3 3 3 1 Winged helix-turn helix HTH_38 PF13936.6 CTQ27235.1 - 0.0014 18.3 0.0 0.0054 16.5 0.0 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ27235.1 - 0.0014 18.3 0.0 0.0077 16.0 0.0 2.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_5 PF01022.20 CTQ27235.1 - 0.0037 17.1 0.0 0.015 15.2 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 CTQ27235.1 - 0.006 16.1 0.0 0.012 15.1 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 CTQ27235.1 - 0.013 15.3 0.8 0.07 13.0 0.1 2.4 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ27235.1 - 0.025 14.6 0.0 0.061 13.3 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.6 CTQ27235.1 - 0.039 14.1 0.0 0.14 12.3 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain Peripla_BP_4 PF13407.6 CTQ27235.1 - 0.044 13.3 0.0 0.075 12.6 0.0 1.4 1 0 0 1 1 1 0 Periplasmic binding protein domain HTH_Tnp_ISL3 PF13542.6 CTQ27235.1 - 0.071 12.5 0.0 0.19 11.2 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_AraC PF00165.23 CTQ27235.1 - 0.076 13.1 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_7 PF02796.15 CTQ27235.1 - 0.15 12.2 0.0 0.33 11.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Sigma54_DBD PF04552.13 CTQ27235.1 - 0.2 11.4 0.0 0.35 10.6 0.0 1.3 1 0 0 1 1 1 0 Sigma-54, DNA binding domain CENP-B_N PF04218.13 CTQ27235.1 - 0.22 11.2 0.1 0.65 9.7 0.0 1.8 2 0 0 2 2 1 0 CENP-B N-terminal DNA-binding domain DUF1479 PF07350.12 CTQ27236.1 - 9e-143 476.0 0.0 1.1e-142 475.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1479) COG5 PF10392.9 CTQ27236.1 - 0.0059 16.8 0.0 0.0098 16.1 0.0 1.2 1 0 0 1 1 1 1 Golgi transport complex subunit 5 Hydrolase_3 PF08282.12 CTQ27237.1 - 1e-51 176.1 0.0 1.2e-51 176.0 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 CTQ27237.1 - 1.8e-14 53.9 0.0 4.2e-10 39.6 0.0 2.2 1 1 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 CTQ27237.1 - 1.3e-06 28.9 0.7 0.0032 17.8 0.0 3.2 2 1 1 3 3 3 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ27237.1 - 0.00014 22.4 0.0 0.26 11.7 0.0 2.7 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CTQ27237.1 - 0.1 12.6 0.3 0.76 9.8 0.0 2.4 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase PFL-like PF02901.15 CTQ27238.1 - 7.8e-208 692.2 0.0 9.7e-208 691.9 0.0 1.0 1 0 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 CTQ27238.1 - 4.2e-30 104.4 0.0 1.1e-29 103.0 0.0 1.8 1 0 0 1 1 1 1 Glycine radical DUF3029 PF11230.8 CTQ27238.1 - 0.02 13.3 0.0 0.26 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3029) Radical_SAM PF04055.21 CTQ27239.1 - 7.8e-32 111.0 0.0 1.4e-31 110.1 0.0 1.4 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 CTQ27239.1 - 4.2e-11 43.3 0.1 3e-10 40.5 0.1 2.0 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 CTQ27239.1 - 0.00016 21.8 1.5 0.049 13.8 1.5 2.3 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.6 CTQ27239.1 - 0.011 16.3 0.4 0.024 15.1 0.4 1.7 1 0 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I G3P_antiterm PF04309.12 CTQ27239.1 - 0.15 11.4 0.0 0.28 10.6 0.0 1.4 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator ThiF PF00899.21 CTQ27240.1 - 9.2e-63 211.8 0.2 1.1e-62 211.5 0.2 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 CTQ27240.1 - 0.002 18.4 0.9 0.017 15.4 1.0 2.1 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 CTQ27240.1 - 0.016 15.2 0.0 0.03 14.4 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 CTQ27240.1 - 0.017 15.5 0.1 0.03 14.8 0.1 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding DAO PF01266.24 CTQ27240.1 - 0.062 12.9 0.0 0.081 12.5 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 CTQ27240.1 - 0.069 12.4 0.0 0.096 12.0 0.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain ApbA PF02558.16 CTQ27240.1 - 0.1 12.2 0.5 0.19 11.4 0.5 1.4 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 CTQ27240.1 - 0.12 11.6 0.3 0.16 11.2 0.3 1.2 1 0 0 1 1 1 0 FAD binding domain TrkA_N PF02254.18 CTQ27240.1 - 0.12 12.6 0.2 0.85 9.9 0.0 2.0 1 1 1 2 2 2 0 TrkA-N domain 2-Hacid_dh_C PF02826.19 CTQ27240.1 - 0.15 11.4 0.2 0.33 10.3 0.0 1.6 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 CTQ27240.1 - 0.2 11.5 0.0 0.29 11.0 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MoeA_N PF03453.17 CTQ27241.1 - 4.1e-47 159.8 0.4 5.6e-47 159.4 0.4 1.2 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 CTQ27241.1 - 7.2e-28 97.1 0.0 1.1e-27 96.5 0.0 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 CTQ27241.1 - 1.5e-21 76.3 0.0 3.7e-21 75.1 0.0 1.7 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) Asparaginase_2 PF01112.18 CTQ27242.1 - 6.3e-118 393.2 1.0 7.1e-118 393.1 1.0 1.0 1 0 0 1 1 1 1 Asparaginase ABC_tran PF00005.27 CTQ27243.1 - 1.1e-59 200.9 0.0 9.7e-31 107.1 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 CTQ27243.1 - 3.9e-19 68.9 0.1 1.3e-08 35.2 0.0 2.4 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 CTQ27243.1 - 8.5e-12 45.0 0.0 2.2e-06 27.3 0.0 2.7 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ27243.1 - 1.8e-11 44.4 0.8 0.00058 20.2 0.0 3.5 2 2 0 2 2 2 2 AAA domain AAA_16 PF13191.6 CTQ27243.1 - 2.1e-09 38.0 2.8 0.00064 20.1 0.1 2.5 2 1 0 2 2 2 2 AAA ATPase domain AAA_21 PF13304.6 CTQ27243.1 - 4.4e-08 33.3 0.6 0.0022 17.9 0.0 4.1 4 0 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ27243.1 - 2.5e-06 27.1 0.2 0.011 15.4 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ27243.1 - 1e-05 25.5 0.2 0.087 12.7 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase IstB_IS21 PF01695.17 CTQ27243.1 - 7.8e-05 22.5 0.1 0.012 15.4 0.0 2.8 3 0 0 3 3 3 1 IstB-like ATP binding protein AAA_25 PF13481.6 CTQ27243.1 - 0.00039 20.1 0.4 0.19 11.3 0.0 3.1 3 0 0 3 3 3 1 AAA domain AAA_7 PF12775.7 CTQ27243.1 - 0.00095 18.7 0.0 0.33 10.5 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region Mg_chelatase PF01078.21 CTQ27243.1 - 0.0012 18.3 0.0 1.6 8.1 0.0 3.1 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 CTQ27243.1 - 0.0012 19.3 0.2 3.7 8.0 0.0 3.3 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 CTQ27243.1 - 0.0014 18.9 0.0 2.3 8.6 0.0 2.6 2 0 0 2 2 2 1 RNA helicase AAA_5 PF07728.14 CTQ27243.1 - 0.0019 18.2 0.2 1.1 9.2 0.1 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) DUF87 PF01935.17 CTQ27243.1 - 0.0026 17.9 1.1 0.5 10.4 0.2 2.3 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_30 PF13604.6 CTQ27243.1 - 0.0033 17.2 0.3 1.7 8.3 0.2 2.7 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.20 CTQ27243.1 - 0.0039 17.1 0.6 2.4 8.0 0.0 2.3 2 0 0 2 2 2 2 Adenylylsulphate kinase Sigma54_activat PF00158.26 CTQ27243.1 - 0.0053 16.5 0.0 0.91 9.2 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain Zeta_toxin PF06414.12 CTQ27243.1 - 0.0069 15.7 0.1 0.96 8.7 0.1 2.5 2 0 0 2 2 2 1 Zeta toxin AAA_24 PF13479.6 CTQ27243.1 - 0.007 16.1 0.0 2.8 7.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 CTQ27243.1 - 0.0083 16.7 0.0 6.4 7.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain DUF3987 PF13148.6 CTQ27243.1 - 0.0083 15.2 0.1 0.12 11.3 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3987) NACHT PF05729.12 CTQ27243.1 - 0.01 15.8 0.4 1.9 8.4 0.0 2.5 2 0 0 2 2 2 0 NACHT domain FtsK_SpoIIIE PF01580.18 CTQ27243.1 - 0.013 14.8 0.0 0.92 8.8 0.0 2.5 2 0 0 2 2 2 0 FtsK/SpoIIIE family PRK PF00485.18 CTQ27243.1 - 0.02 14.6 0.2 5 6.8 0.1 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AIG1 PF04548.16 CTQ27243.1 - 0.028 13.8 1.3 1.1 8.6 0.3 2.5 2 0 0 2 2 2 0 AIG1 family ATP-synt_ab PF00006.25 CTQ27243.1 - 0.029 14.0 0.0 2.2 7.9 0.0 2.5 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_33 PF13671.6 CTQ27243.1 - 0.03 14.5 0.3 14 5.9 0.0 2.7 2 1 0 2 2 2 0 AAA domain CbiA PF01656.23 CTQ27243.1 - 0.047 13.7 3.2 0.49 10.5 0.1 2.9 3 1 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain TsaE PF02367.17 CTQ27243.1 - 0.067 13.2 0.1 17 5.4 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TrwB_AAD_bind PF10412.9 CTQ27243.1 - 0.08 11.8 0.5 8.2 5.2 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain ResIII PF04851.15 CTQ27243.1 - 0.17 11.9 0.0 0.62 10.1 0.0 1.9 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit MMR_HSR1 PF01926.23 CTQ27243.1 - 0.17 12.0 0.1 15 5.7 0.1 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase Pox_A32 PF04665.12 CTQ27243.1 - 0.28 10.6 0.5 3 7.2 0.1 2.3 2 0 0 2 2 2 0 Poxvirus A32 protein AAA_15 PF13175.6 CTQ27243.1 - 0.3 10.8 0.0 22 4.6 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain Hpr_kinase_C PF07475.12 CTQ27243.1 - 0.64 9.5 2.8 7.5 6.0 0.1 2.6 3 0 0 3 3 2 0 HPr Serine kinase C-terminal domain ATPase PF06745.13 CTQ27243.1 - 3.3 7.0 6.9 5.3 6.3 0.0 3.2 4 0 0 4 4 4 0 KaiC SBP_bac_5 PF00496.22 CTQ27244.1 - 3.3e-99 332.4 10.8 4.2e-99 332.0 10.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Ssl1 PF04056.14 CTQ27244.1 - 0.0033 17.3 0.0 0.0086 15.9 0.0 1.6 2 0 0 2 2 2 1 Ssl1-like BPD_transp_1 PF00528.22 CTQ27245.1 - 7.3e-42 143.2 9.5 7.3e-42 143.2 9.5 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2070 PF09843.9 CTQ27245.1 - 1.3 7.2 6.4 1.6 7.0 6.4 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) BPD_transp_1 PF00528.22 CTQ27246.1 - 2.9e-30 105.4 11.6 2.9e-30 105.4 11.6 2.0 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ27246.1 - 8.3e-16 57.7 0.2 8.3e-16 57.7 0.2 3.4 4 1 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C Gly-zipper_YMGG PF13441.6 CTQ27246.1 - 0.036 13.8 6.8 0.082 12.7 6.8 1.6 1 0 0 1 1 1 0 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 CTQ27246.1 - 0.38 10.8 8.2 1.1 9.3 8.2 1.8 1 0 0 1 1 1 0 Glycine zipper DUF3482 PF11981.8 CTQ27246.1 - 0.52 9.7 3.4 0.96 8.8 3.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Radical_SAM PF04055.21 CTQ27247.1 - 6.6e-34 117.7 0.0 8e-31 107.7 0.0 2.4 2 0 0 2 2 2 2 Radical SAM superfamily UPF0004 PF00919.20 CTQ27247.1 - 1.4e-21 76.3 0.0 2.6e-21 75.5 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM_2 PF18693.1 CTQ27247.1 - 1.5e-21 76.3 1.7 2.8e-21 75.4 1.7 1.5 1 0 0 1 1 1 1 TRAM domain TRAM PF01938.20 CTQ27247.1 - 0.0001 22.2 0.4 0.00022 21.2 0.4 1.6 1 0 0 1 1 1 1 TRAM domain UPF0180 PF03698.13 CTQ27247.1 - 0.0074 16.4 0.2 3.2 8.0 0.1 2.6 2 0 0 2 2 2 2 Uncharacterised protein family (UPF0180) CLP1_P PF16575.5 CTQ27247.1 - 0.032 14.0 0.0 0.06 13.1 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Methyltransf_2 PF00891.18 CTQ27247.1 - 0.032 13.5 0.0 0.13 11.5 0.0 1.9 2 0 0 2 2 2 0 O-methyltransferase domain RNase_II_C_S1 PF18614.1 CTQ27247.1 - 0.095 12.7 0.5 0.19 11.7 0.5 1.5 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain S1 PF00575.23 CTQ27247.1 - 1.5 9.2 3.6 16 5.9 2.6 2.3 1 1 1 2 2 2 0 S1 RNA binding domain LacY_symp PF01306.19 CTQ27248.1 - 2.9e-125 418.3 26.4 3.5e-125 418.0 26.4 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1_like PF12832.7 CTQ27248.1 - 5e-23 81.6 28.9 2.3e-22 79.4 28.9 1.8 1 1 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 CTQ27248.1 - 9.2e-22 77.4 40.2 8e-15 54.6 33.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 CTQ27248.1 - 0.00022 19.9 34.3 0.0028 16.3 24.7 3.1 1 1 1 2 2 2 2 MFS/sugar transport protein TraQ PF09679.10 CTQ27248.1 - 0.24 11.4 2.9 2.9 7.9 0.4 2.6 1 1 1 2 2 2 0 Type-F conjugative transfer system pilin chaperone (TraQ) YliH PF10799.8 CTQ27249.1 - 2.4e-73 244.0 1.5 2.7e-73 243.8 1.5 1.0 1 0 0 1 1 1 1 Biofilm formation protein (YliH/bssR) GSDH PF07995.11 CTQ27250.1 - 8.8e-130 432.8 0.0 1e-129 432.7 0.0 1.0 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase GST_N_3 PF13417.6 CTQ27251.1 - 5.6e-16 58.7 0.0 1e-15 57.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 CTQ27251.1 - 9.8e-15 54.7 0.0 1.7e-14 53.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ27251.1 - 1.9e-12 47.3 0.0 3.9e-12 46.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 CTQ27251.1 - 7.8e-10 38.6 0.3 1.6e-09 37.6 0.3 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 CTQ27251.1 - 3.2e-08 33.7 0.0 5.8e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 CTQ27251.1 - 0.00012 22.8 0.0 0.00031 21.4 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase N-terminal domain GST_C_3 PF14497.6 CTQ27251.1 - 0.0014 18.8 0.0 0.0024 18.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Tom37 PF10568.9 CTQ27251.1 - 0.016 15.6 0.0 0.028 14.7 0.0 1.4 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein GST_C_5 PF16865.5 CTQ27251.1 - 0.042 14.4 0.0 0.067 13.8 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Peptidase_S11 PF00768.20 CTQ27252.1 - 1.5e-96 322.5 0.7 1.9e-96 322.2 0.7 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase PBP5_C PF07943.13 CTQ27252.1 - 8.5e-23 80.4 0.1 1.4e-22 79.7 0.1 1.4 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain Beta-lactamase2 PF13354.6 CTQ27252.1 - 1.4e-11 44.4 0.1 2e-11 43.9 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 CTQ27252.1 - 0.02 14.2 0.7 0.45 9.7 0.1 2.1 1 1 0 2 2 2 0 Beta-lactamase DeoRC PF00455.22 CTQ27253.1 - 8e-41 139.6 0.0 1.2e-40 139.1 0.0 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ27253.1 - 2.2e-13 49.7 0.0 3.5e-13 49.1 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ27253.1 - 0.0035 17.3 0.3 0.0056 16.6 0.3 1.3 1 0 0 1 1 1 1 HTH domain HTH_31 PF13560.6 CTQ27253.1 - 0.014 15.7 0.0 0.034 14.5 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Mga PF08280.11 CTQ27253.1 - 0.015 15.3 0.1 0.024 14.6 0.1 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_23 PF13384.6 CTQ27253.1 - 0.017 14.9 0.2 0.017 14.9 0.2 1.7 2 0 0 2 2 2 0 Homeodomain-like domain HTH_8 PF02954.19 CTQ27253.1 - 0.036 13.9 0.1 0.094 12.5 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family Sigma70_r4 PF04545.16 CTQ27253.1 - 0.062 12.8 0.1 0.16 11.5 0.1 1.7 1 1 0 1 1 1 0 Sigma-70, region 4 PAP2 PF01569.21 CTQ27254.1 - 4.1e-14 52.5 11.2 8e-14 51.6 11.2 1.5 1 0 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 CTQ27254.1 - 5.2e-10 39.3 20.2 6.5e-09 35.7 19.9 2.1 1 1 0 1 1 1 1 PAP2 superfamily DUF2628 PF10947.8 CTQ27254.1 - 7.1 7.1 16.3 0.61 10.5 7.6 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2628) MFS_1 PF07690.16 CTQ27255.1 - 6.4e-27 94.4 41.1 6.4e-27 94.4 41.1 1.3 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ27255.1 - 9.5e-06 24.7 32.3 1.1e-05 24.5 11.6 2.7 1 1 0 2 2 2 2 Sugar (and other) transporter Hydrolase_3 PF08282.12 CTQ27256.1 - 2.5e-54 184.7 0.0 2.8e-54 184.5 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 CTQ27256.1 - 6.1e-13 48.9 0.0 4.4e-09 36.2 0.0 2.2 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.7 CTQ27256.1 - 6.1e-07 30.0 0.0 0.00056 20.4 0.0 2.6 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ27256.1 - 6.6e-06 26.6 0.3 0.00021 21.6 0.3 2.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CTQ27256.1 - 0.077 13.1 0.0 0.28 11.3 0.0 1.9 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase MFS_1 PF07690.16 CTQ27257.1 - 2.8e-23 82.4 59.2 6.2e-16 58.3 25.4 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ27257.1 - 0.049 12.5 34.9 0.12 11.2 12.2 3.2 2 1 1 3 3 3 0 Sugar (and other) transporter TetR_N PF00440.23 CTQ27258.1 - 3.4e-10 39.6 0.2 9.1e-10 38.2 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 CTQ27258.1 - 6.4e-08 32.8 0.4 1.3e-07 31.7 0.1 1.6 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_6 PF13977.6 CTQ27258.1 - 0.0011 19.2 4.3 0.0031 17.7 1.5 2.7 2 1 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_C_28 PF17937.1 CTQ27258.1 - 0.0021 18.5 1.8 0.0025 18.2 0.7 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain ERAP1_C PF11838.8 CTQ27258.1 - 0.029 13.9 0.1 0.045 13.3 0.1 1.4 1 0 0 1 1 1 0 ERAP1-like C-terminal domain Asp-Al_Ex PF06826.12 CTQ27259.1 - 1.4e-82 275.5 49.2 3.2e-42 144.2 25.0 2.1 2 0 0 2 2 2 2 Predicted Permease Membrane Region TrkA_C PF02080.21 CTQ27259.1 - 2.7e-19 68.8 0.5 2e-08 34.0 0.3 2.5 2 0 0 2 2 2 2 TrkA-C domain YbjM PF11045.8 CTQ27260.1 - 6.7e-40 135.9 12.0 7.6e-40 135.7 12.0 1.0 1 0 0 1 1 1 1 Putative inner membrane protein of Enterobacteriaceae DUF2721 PF11026.8 CTQ27260.1 - 0.11 12.4 9.0 0.034 14.0 2.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) UCR_6-4kD PF08997.10 CTQ27260.1 - 0.15 12.1 2.8 0.24 11.4 2.8 1.4 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase complex, 6.4kD protein DUF5518 PF17647.1 CTQ27260.1 - 0.25 11.5 10.7 0.092 12.9 1.2 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5518) Polysacc_synt PF01943.17 CTQ27260.1 - 0.56 9.5 4.7 1 8.7 4.7 1.5 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein Bap31 PF05529.12 CTQ27260.1 - 3 7.7 5.1 11 5.9 0.2 2.1 2 0 0 2 2 2 0 Bap31/Bap29 transmembrane region WTF PF03303.13 CTQ27260.1 - 9.1 5.9 12.6 2.9 7.6 8.6 1.8 1 1 0 2 2 2 0 WTF protein Glutaredoxin PF00462.24 CTQ27261.1 - 1.7e-16 60.1 0.1 2.2e-16 59.8 0.1 1.1 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 CTQ27261.1 - 3.4e-05 24.2 0.0 4.2e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_3 PF13192.6 CTQ27261.1 - 0.00011 22.2 0.1 0.00022 21.2 0.1 1.5 1 1 0 1 1 1 1 Thioredoxin domain Thioredoxin_2 PF13098.6 CTQ27261.1 - 0.0046 17.4 0.1 0.0099 16.3 0.1 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_4 PF13462.6 CTQ27261.1 - 0.02 15.1 0.1 1.7 8.7 0.1 2.0 1 1 1 2 2 2 0 Thioredoxin zf-XS PF03470.14 CTQ27261.1 - 0.061 13.6 0.3 0.66 10.3 0.3 2.1 1 1 0 1 1 1 0 XS zinc finger domain TraF PF13728.6 CTQ27261.1 - 0.071 12.9 0.0 0.078 12.8 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein DUF1418 PF07214.12 CTQ27262.1 - 2.1e-31 107.6 1.5 2.3e-31 107.5 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1418) Sensor_TM1 PF13755.6 CTQ27262.1 - 0.45 10.3 0.1 0.45 10.3 0.1 2.2 2 1 0 2 2 2 0 Sensor N-terminal transmembrane domain E1-E2_ATPase PF00122.20 CTQ27262.1 - 3.3 7.2 4.9 3.8 7.0 4.9 1.0 1 0 0 1 1 1 0 E1-E2 ATPase Nitroreductase PF00881.24 CTQ27263.1 - 1.6e-19 70.6 0.9 1.2e-18 67.7 0.9 2.0 1 1 0 1 1 1 1 Nitroreductase family DUF3665 PF12427.8 CTQ27263.1 - 0.096 12.4 0.0 0.23 11.2 0.0 1.6 1 0 0 1 1 1 0 Branched-chain amino acid aminotransferase RimK PF08443.11 CTQ27264.1 - 6.4e-78 260.7 0.0 7.8e-78 260.4 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain Rimk_N PF18030.1 CTQ27264.1 - 1.7e-39 134.1 0.0 3.5e-39 133.1 0.0 1.5 1 0 0 1 1 1 1 RimK PreATP-grasp domain GSH-S_ATP PF02955.16 CTQ27264.1 - 2.4e-17 62.9 0.2 3.5e-17 62.4 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 CTQ27264.1 - 3.6e-10 40.1 0.0 5.3e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 CTQ27264.1 - 2.5e-09 36.8 0.1 0.0053 16.0 0.0 3.1 1 1 1 2 2 2 2 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 CTQ27264.1 - 8.1e-07 28.8 0.1 1.7e-06 27.7 0.1 1.5 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_YheCD PF14398.6 CTQ27264.1 - 0.011 15.0 0.0 0.08 12.2 0.0 2.2 1 1 0 1 1 1 0 YheC/D like ATP-grasp Arm-DNA-bind_3 PF13356.6 CTQ27264.1 - 0.028 14.8 0.0 0.077 13.4 0.0 1.7 1 0 0 1 1 1 0 Arm DNA-binding domain GARS_A PF01071.19 CTQ27264.1 - 0.044 13.5 0.1 0.073 12.8 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_Ter PF15632.6 CTQ27264.1 - 0.049 13.4 0.0 0.14 12.0 0.0 1.7 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon YbjN PF10722.9 CTQ27265.1 - 3.4e-16 59.5 0.0 4.3e-16 59.1 0.0 1.1 1 0 0 1 1 1 1 Putative bacterial sensory transduction regulator SBP_bac_8 PF13416.6 CTQ27266.1 - 1.4e-34 120.2 3.5 1.7e-34 119.9 3.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ27266.1 - 2.7e-25 89.2 1.7 2.7e-25 89.2 1.7 1.6 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ27266.1 - 1.5e-17 64.5 8.4 2.2e-17 64.0 8.4 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 CTQ27266.1 - 2e-08 34.3 0.0 8.1e-08 32.3 0.0 2.0 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Lipoprotein_8 PF02030.15 CTQ27266.1 - 0.00014 20.8 0.2 0.2 10.3 0.0 2.3 2 0 0 2 2 2 2 Hypothetical lipoprotein (MG045 family) ABC_tran PF00005.27 CTQ27267.1 - 1.4e-38 132.5 0.0 5.3e-38 130.6 0.0 1.8 2 0 0 2 2 2 1 ABC transporter TOBE_2 PF08402.10 CTQ27267.1 - 5e-21 74.7 0.0 1.4e-20 73.2 0.0 1.9 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 CTQ27267.1 - 5.8e-07 29.6 0.0 0.0075 16.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ27267.1 - 0.00032 20.7 0.0 0.00084 19.3 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 CTQ27267.1 - 0.0049 16.3 0.1 0.27 10.6 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ27267.1 - 0.0049 17.3 0.1 0.0088 16.4 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 CTQ27267.1 - 0.0064 16.7 0.1 0.045 14.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CTQ27267.1 - 0.0078 15.9 0.0 0.018 14.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 CTQ27267.1 - 0.015 15.5 0.2 0.051 13.9 0.2 1.9 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 CTQ27267.1 - 0.022 14.7 0.0 0.039 13.9 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_33 PF13671.6 CTQ27267.1 - 0.035 14.3 0.1 0.23 11.6 0.1 2.1 1 1 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 CTQ27267.1 - 0.07 12.8 0.0 0.082 12.6 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_23 PF13476.6 CTQ27267.1 - 0.14 12.6 0.0 0.21 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 CTQ27267.1 - 0.24 10.5 0.0 0.39 9.8 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_25 PF13481.6 CTQ27267.1 - 0.28 10.7 1.4 0.63 9.6 0.0 2.0 2 1 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 CTQ27268.1 - 7.5e-24 84.5 15.7 7.5e-24 84.5 15.7 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ27269.1 - 9.9e-14 51.5 19.2 9.9e-14 51.5 19.2 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component HRG PF16954.5 CTQ27269.1 - 0.3 11.5 5.9 0.8 10.1 0.1 3.7 3 0 0 3 3 3 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene DUF2593 PF10767.9 CTQ27270.1 - 1e-61 207.2 4.7 1.2e-61 206.9 4.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2593) SLATT_1 PF18181.1 CTQ27270.1 - 1.6 8.6 4.9 0.54 10.2 2.2 1.5 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 tRNA_U5-meth_tr PF05958.11 CTQ27271.1 - 8.6e-19 67.7 0.0 1.2e-16 60.7 0.0 2.3 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 CTQ27271.1 - 2.2e-08 34.0 0.0 4.6e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ27271.1 - 1e-05 25.1 0.0 1.6e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 CTQ27271.1 - 4.4e-05 24.1 0.0 0.00012 22.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 CTQ27271.1 - 0.0026 17.4 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.12 CTQ27271.1 - 0.01 16.5 0.0 0.022 15.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.15 CTQ27271.1 - 0.037 13.7 0.0 0.058 13.0 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_4 PF02390.17 CTQ27271.1 - 0.047 13.2 0.0 0.082 12.4 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase NodS PF05401.11 CTQ27271.1 - 0.058 13.0 0.0 0.091 12.4 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_12 PF08242.12 CTQ27271.1 - 0.067 13.9 0.0 0.12 13.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Trans_reg_C PF00486.28 CTQ27272.1 - 1.5e-28 98.7 0.0 3.3e-28 97.6 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 CTQ27272.1 - 1.8e-27 95.7 0.1 2.7e-27 95.2 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain OKR_DC_1_N PF03709.15 CTQ27272.1 - 0.19 12.0 0.0 0.35 11.1 0.0 1.4 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain HisKA PF00512.25 CTQ27273.1 - 9.2e-18 64.1 0.8 4.1e-17 62.0 0.8 2.2 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 CTQ27273.1 - 1.5e-17 64.1 0.0 2.6e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 CTQ27273.1 - 1.1e-06 28.7 0.0 2.3e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 CTQ27273.1 - 0.0007 19.5 0.0 0.0015 18.4 0.0 1.4 1 0 0 1 1 1 1 GHKL domain FA_desaturase PF00487.24 CTQ27273.1 - 0.049 13.5 1.1 0.092 12.6 1.1 1.4 1 0 0 1 1 1 0 Fatty acid desaturase HATPase_c_3 PF13589.6 CTQ27273.1 - 0.12 12.2 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FtsX PF02687.21 CTQ27273.1 - 1.2 9.6 4.8 12 6.4 2.0 2.3 2 0 0 2 2 2 0 FtsX-like permease family SBP_bac_3 PF00497.20 CTQ27274.1 - 8.3e-72 241.3 0.2 9.3e-72 241.1 0.2 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ27274.1 - 4.3e-06 26.9 0.0 0.00021 21.5 0.0 2.3 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 CTQ27274.1 - 0.0014 18.7 0.1 0.0042 17.1 0.0 1.8 2 0 0 2 2 2 1 NMT1/THI5 like Phosphonate-bd PF12974.7 CTQ27274.1 - 0.0081 15.8 0.1 0.022 14.3 0.1 1.7 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein YhfZ_C PF14503.6 CTQ27274.1 - 0.011 15.3 0.2 0.029 13.9 0.2 1.6 1 1 0 1 1 1 0 YhfZ C-terminal domain NMT1_3 PF16868.5 CTQ27274.1 - 0.023 14.2 0.0 0.049 13.0 0.0 1.5 1 0 0 1 1 1 0 NMT1-like family BPD_transp_1 PF00528.22 CTQ27275.1 - 1.2e-13 51.2 8.4 1.2e-13 51.2 8.4 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SPC25 PF06703.11 CTQ27275.1 - 0.58 9.9 3.1 0.46 10.3 0.1 2.1 2 0 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) BPD_transp_1 PF00528.22 CTQ27276.1 - 5.5e-18 65.4 10.7 5.5e-18 65.4 10.7 1.8 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component SBP_bac_3 PF00497.20 CTQ27277.1 - 1.6e-70 237.0 0.9 1.9e-70 236.8 0.9 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ27277.1 - 7.1e-05 23.0 0.0 0.0025 18.0 0.0 2.5 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site Phosphonate-bd PF12974.7 CTQ27277.1 - 0.073 12.7 0.1 0.85 9.2 0.1 2.1 1 1 1 2 2 2 0 ABC transporter, phosphonate, periplasmic substrate-binding protein ABC_tran PF00005.27 CTQ27278.1 - 4.9e-35 121.0 0.0 6.7e-35 120.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ27278.1 - 5.8e-12 46.0 2.2 4.6e-07 29.9 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ27278.1 - 7.6e-07 28.8 0.0 9.4e-05 21.9 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 CTQ27278.1 - 4.5e-05 23.3 0.0 0.06 13.0 0.1 2.1 2 0 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ27278.1 - 0.00017 21.5 0.0 0.00035 20.5 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 CTQ27278.1 - 0.00037 20.9 0.1 0.00056 20.3 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_13 PF13166.6 CTQ27278.1 - 0.0013 17.5 0.0 0.026 13.2 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 CTQ27278.1 - 0.0036 17.8 0.0 0.0061 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ27278.1 - 0.0044 16.7 0.0 0.008 15.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 CTQ27278.1 - 0.0093 16.2 0.1 0.092 13.0 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CTQ27278.1 - 0.02 14.6 0.0 0.051 13.3 0.0 1.8 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 CTQ27278.1 - 0.027 13.3 0.2 0.65 8.7 0.1 2.5 2 1 0 2 2 2 0 Predicted ATPase of the ABC class MMR_HSR1 PF01926.23 CTQ27278.1 - 0.041 14.0 0.0 0.09 12.9 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_18 PF13238.6 CTQ27278.1 - 0.064 13.8 0.1 1 9.9 0.0 2.6 3 0 0 3 3 3 0 AAA domain IstB_IS21 PF01695.17 CTQ27278.1 - 0.073 12.8 0.0 1.1 9.0 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_24 PF13479.6 CTQ27278.1 - 0.1 12.3 0.0 0.35 10.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 CTQ27278.1 - 0.11 12.0 0.1 1.9 8.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain Guanylate_kin PF00625.21 CTQ27278.1 - 0.14 11.9 0.0 0.25 11.0 0.0 1.5 1 0 0 1 1 1 0 Guanylate kinase DUF3828 PF12883.7 CTQ27279.1 - 6.4e-22 78.2 0.0 7.6e-22 78.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3828) MASE5 PF17178.4 CTQ27282.1 - 1.5e-67 227.1 24.3 2.1e-67 226.7 24.3 1.2 1 0 0 1 1 1 1 Membrane-associated sensor GGDEF PF00990.21 CTQ27282.1 - 1.4e-50 171.2 0.0 2.5e-50 170.4 0.0 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 CTQ27282.1 - 0.0014 18.9 0.3 0.0037 17.5 0.2 1.8 1 1 0 1 1 1 1 GGDEF-like domain DUF3290 PF11694.8 CTQ27282.1 - 0.8 9.7 7.9 14 5.7 2.3 3.1 3 1 1 4 4 4 0 Protein of unknown function (DUF3290) Amidase_2 PF01510.25 CTQ27284.1 - 1.5e-25 90.1 0.2 3.4e-25 88.9 0.1 1.6 2 0 0 2 2 2 1 N-acetylmuramoyl-L-alanine amidase PG_binding_1 PF01471.18 CTQ27284.1 - 0.0095 16.1 0.0 0.021 15.0 0.0 1.5 1 0 0 1 1 1 1 Putative peptidoglycan binding domain Epimerase PF01370.21 CTQ27285.1 - 5.1e-25 88.3 0.0 7.6e-25 87.8 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 CTQ27285.1 - 8.4e-18 64.3 0.0 1.1e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 CTQ27285.1 - 1.9e-09 37.0 0.0 2.7e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain GDP_Man_Dehyd PF16363.5 CTQ27285.1 - 1.6e-08 34.3 0.0 4.3e-08 32.9 0.0 1.7 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 CTQ27285.1 - 6e-08 32.8 0.0 8.7e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 CTQ27285.1 - 7e-07 28.9 0.0 1.1e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_4 PF07993.12 CTQ27285.1 - 6.6e-06 25.5 0.0 1.4e-05 24.4 0.0 1.7 1 1 0 1 1 1 1 Male sterility protein adh_short_C2 PF13561.6 CTQ27285.1 - 0.02 14.5 0.1 0.047 13.2 0.0 1.7 2 0 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase NmrA PF05368.13 CTQ27285.1 - 0.025 14.2 0.0 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family ADH_zinc_N PF00107.26 CTQ27285.1 - 0.077 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 CTQ27286.1 - 1.4e-15 57.6 0.1 2.6e-15 56.8 0.1 1.4 1 0 0 1 1 1 1 NAD(P)H-binding DUF2867 PF11066.8 CTQ27286.1 - 8.4e-15 55.4 0.1 1.6e-14 54.5 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2867) Epimerase PF01370.21 CTQ27286.1 - 1.8e-10 40.7 0.0 3.1e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 CTQ27286.1 - 2.2e-08 34.0 0.0 3.1e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 CTQ27286.1 - 0.0013 17.8 0.0 0.002 17.2 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family adh_short PF00106.25 CTQ27286.1 - 0.0031 17.0 0.0 0.0053 16.2 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase RmlD_sub_bind PF04321.17 CTQ27286.1 - 0.018 14.1 0.0 0.031 13.4 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain GDP_Man_Dehyd PF16363.5 CTQ27286.1 - 0.021 14.2 0.0 0.033 13.6 0.0 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Semialdhyde_dh PF01118.24 CTQ27286.1 - 0.037 14.4 0.2 0.11 12.9 0.1 1.8 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain PAC2 PF09754.9 CTQ27286.1 - 0.11 12.4 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 PAC2 family F420_oxidored PF03807.17 CTQ27286.1 - 0.2 12.2 0.2 1.9 9.1 0.0 2.6 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Beta_elim_lyase PF01212.21 CTQ27287.1 - 4.3e-95 318.4 0.0 1.1e-94 317.0 0.0 1.6 1 1 1 2 2 2 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 CTQ27287.1 - 3.9e-09 36.1 0.0 6e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 CTQ27287.1 - 0.016 14.5 0.1 0.5 9.6 0.0 2.1 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 CTQ27287.1 - 0.032 12.8 0.0 0.04 12.4 0.0 1.4 1 1 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme TPP_enzyme_N PF02776.18 CTQ27288.1 - 1.1e-42 145.6 1.3 1.3e-41 142.1 0.2 2.4 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 CTQ27288.1 - 1.1e-40 139.0 1.9 1.5e-40 138.5 0.4 2.1 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 CTQ27288.1 - 3.8e-32 110.9 0.0 8.3e-32 109.8 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 CTQ27288.1 - 0.22 11.2 1.2 2 8.1 0.0 2.3 2 0 0 2 2 2 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DoxX PF07681.12 CTQ27289.1 - 1.1e-18 67.6 12.5 1.1e-18 67.6 12.5 1.6 2 0 0 2 2 2 1 DoxX PRA1 PF03208.19 CTQ27289.1 - 0.21 11.2 3.3 0.39 10.3 3.3 1.4 1 0 0 1 1 1 0 PRA1 family protein DoxD PF04173.13 CTQ27289.1 - 0.26 11.2 5.6 0.23 11.4 3.8 1.7 1 1 1 2 2 2 0 TQO small subunit DoxD DUF3742 PF12553.8 CTQ27289.1 - 1.3 9.1 6.5 0.89 9.7 4.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3742) DUF4044 PF13253.6 CTQ27289.1 - 6.5 6.4 8.2 0.54 9.8 2.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4044) Fer2 PF00111.27 CTQ27290.1 - 3.7e-14 52.4 2.0 8.8e-14 51.2 2.0 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_1 PF00175.21 CTQ27290.1 - 9.6e-08 32.6 0.0 3.3e-07 30.9 0.0 1.9 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 CTQ27290.1 - 1e-07 32.2 0.0 1.9e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Fer2_3 PF13085.6 CTQ27290.1 - 0.2 11.7 0.8 0.39 10.7 0.8 1.5 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Prismane PF03063.20 CTQ27291.1 - 9.1e-156 519.5 0.0 1e-155 519.3 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family DUF3703 PF12487.8 CTQ27291.1 - 0.054 13.3 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3703) Lys_export PF03956.13 CTQ27292.1 - 1.6e-59 200.6 25.2 1.6e-58 197.4 13.8 2.0 2 0 0 2 2 2 2 Lysine exporter LysO EptA_B_N PF08019.12 CTQ27292.1 - 1.6 8.6 15.0 1.3 8.9 2.9 3.2 1 1 2 3 3 3 0 Phosphoethanolamine transferase EptA/EptB MIP PF00230.20 CTQ27293.1 - 1.4e-49 168.9 20.4 1.5e-49 168.7 20.4 1.0 1 0 0 1 1 1 1 Major intrinsic protein DUF2813 PF11398.8 CTQ27295.1 - 6.2e-151 502.9 0.2 8e-151 502.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) AAA_15 PF13175.6 CTQ27295.1 - 3.9e-12 46.6 0.0 1e-08 35.3 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_21 PF13304.6 CTQ27295.1 - 1e-09 38.6 0.1 0.0001 22.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ27295.1 - 3.6e-06 26.6 0.0 9.4e-06 25.3 0.0 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ27295.1 - 0.0014 19.2 0.0 0.0023 18.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ27295.1 - 0.0023 17.4 0.0 0.0039 16.7 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 CTQ27295.1 - 0.016 15.7 0.0 0.079 13.5 0.0 2.1 1 1 0 1 1 1 0 ABC transporter HlyD_D23 PF16576.5 CTQ27297.1 - 9.3e-19 67.5 8.0 2.7e-18 66.0 8.0 1.8 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 CTQ27297.1 - 2.8e-15 56.9 7.8 2.1e-13 50.9 0.1 3.3 2 1 1 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 CTQ27297.1 - 4.7e-09 35.9 3.0 4.7e-09 35.9 3.0 4.5 4 0 0 4 4 4 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 CTQ27297.1 - 0.00017 21.4 1.7 0.03 14.1 0.2 2.9 3 0 0 3 3 3 1 Biotin-requiring enzyme HlyD_2 PF12700.7 CTQ27297.1 - 0.0003 19.7 0.0 0.00064 18.6 0.1 1.6 2 0 0 2 2 2 1 HlyD family secretion protein Peptidase_M23 PF01551.22 CTQ27297.1 - 0.00041 20.5 1.1 0.45 10.8 0.1 2.7 2 0 0 2 2 2 2 Peptidase family M23 PTS_EIIA_1 PF00358.20 CTQ27297.1 - 0.011 15.4 0.5 1.4 8.7 0.1 2.4 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YqfD PF06898.11 CTQ27297.1 - 0.072 11.9 0.8 1.2 7.9 0.1 2.1 2 0 0 2 2 2 0 Putative stage IV sporulation protein YqfD RnfC_N PF13375.6 CTQ27297.1 - 0.14 12.2 1.8 13 5.8 0.2 3.4 3 1 1 4 4 4 0 RnfC Barrel sandwich hybrid domain PS_Dcarbxylase PF02666.15 CTQ27297.1 - 0.14 11.6 0.0 0.51 9.9 0.0 2.0 2 1 0 2 2 2 0 Phosphatidylserine decarboxylase Med9 PF07544.13 CTQ27297.1 - 0.44 10.7 6.6 4.4 7.5 6.6 2.3 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 MscS_porin PF12795.7 CTQ27297.1 - 1.8 8.0 26.9 12 5.3 25.9 2.4 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain TOBE PF03459.17 CTQ27297.1 - 4.7 7.6 7.2 2.5 8.4 0.4 3.8 4 1 0 4 4 3 0 TOBE domain MacB_PCD PF12704.7 CTQ27298.1 - 7.6e-39 134.1 1.9 7.6e-39 134.1 1.9 2.0 2 0 0 2 2 2 1 MacB-like periplasmic core domain ABC_tran PF00005.27 CTQ27298.1 - 1e-31 110.3 0.0 1.9e-31 109.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter FtsX PF02687.21 CTQ27298.1 - 3.5e-12 46.6 11.7 1.3e-11 44.8 3.1 3.3 3 0 0 3 3 3 1 FtsX-like permease family SMC_N PF02463.19 CTQ27298.1 - 1.6e-06 27.8 0.2 0.0029 17.1 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ27298.1 - 0.00033 20.3 0.2 0.00075 19.2 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 CTQ27298.1 - 0.00037 20.4 1.3 0.058 13.2 0.3 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ27298.1 - 0.0048 16.8 0.2 0.014 15.3 0.2 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 CTQ27298.1 - 0.0074 16.7 0.6 0.018 15.4 0.6 1.7 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 CTQ27298.1 - 0.013 15.6 0.0 0.038 14.1 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.6 CTQ27298.1 - 0.017 15.3 0.1 0.097 12.8 0.1 2.2 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ27298.1 - 0.029 14.1 2.2 0.26 11.0 1.9 2.6 2 1 0 2 2 2 0 AAA domain ABC2_membrane_3 PF12698.7 CTQ27298.1 - 0.035 13.2 1.4 0.061 12.4 1.4 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein Glyco_trans_4_4 PF13579.6 CTQ27298.1 - 0.036 14.5 0.8 0.036 14.5 0.8 2.0 2 0 0 2 2 2 0 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 CTQ27298.1 - 0.046 13.7 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase Family 4 AAA_22 PF13401.6 CTQ27298.1 - 0.059 13.6 0.4 0.29 11.4 0.4 2.1 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 CTQ27298.1 - 0.063 13.2 0.1 4.2 7.2 0.0 2.4 2 0 0 2 2 2 0 NTPase AAA_28 PF13521.6 CTQ27298.1 - 0.087 13.1 0.0 0.22 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF4064 PF13273.6 CTQ27298.1 - 0.091 13.0 14.2 0.6 10.4 8.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) AAA_23 PF13476.6 CTQ27298.1 - 0.095 13.2 0.1 0.17 12.4 0.1 1.3 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 CTQ27298.1 - 0.17 12.0 0.5 0.31 11.1 0.5 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain DUF4396 PF14342.6 CTQ27298.1 - 4.6 7.6 11.3 0.13 12.6 0.9 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4396) CSD PF00313.22 CTQ27299.1 - 2.6e-28 97.6 0.1 2.9e-28 97.5 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 CTQ27299.1 - 0.00086 18.9 0.2 0.0011 18.6 0.2 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain ClpS PF02617.17 CTQ27300.1 - 1.4e-34 117.7 0.2 1.7e-34 117.4 0.2 1.1 1 0 0 1 1 1 1 ATP-dependent Clp protease adaptor protein ClpS AAA_2 PF07724.14 CTQ27301.1 - 3e-51 174.0 0.0 1.6e-47 161.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 CTQ27301.1 - 7.9e-30 102.9 2.3 1.2e-29 102.2 1.1 2.0 2 0 0 2 2 1 1 AAA lid domain AAA PF00004.29 CTQ27301.1 - 6.2e-25 88.2 0.1 7.9e-13 49.0 0.0 3.4 2 1 1 3 3 3 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 CTQ27301.1 - 2.2e-24 85.3 0.0 6.2e-24 83.9 0.0 1.9 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 CTQ27301.1 - 1.9e-18 66.8 0.1 1.2e-12 48.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) Clp_N PF02861.20 CTQ27301.1 - 1.6e-16 60.2 1.3 8.2e-15 54.7 1.2 3.0 2 0 0 2 2 2 1 Clp amino terminal domain, pathogenicity island component AAA_16 PF13191.6 CTQ27301.1 - 2.6e-12 47.4 6.5 1.7e-06 28.5 0.2 4.0 4 1 0 4 4 3 2 AAA ATPase domain Sigma54_activat PF00158.26 CTQ27301.1 - 3.7e-12 46.3 0.2 9.5e-05 22.2 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain TniB PF05621.11 CTQ27301.1 - 1e-10 41.4 0.1 1.3e-07 31.2 0.0 3.6 2 2 1 3 3 3 1 Bacterial TniB protein AAA_22 PF13401.6 CTQ27301.1 - 5.3e-08 33.2 2.4 0.028 14.7 0.0 4.2 2 2 1 3 3 3 2 AAA domain ResIII PF04851.15 CTQ27301.1 - 1.1e-06 28.8 0.0 0.023 14.7 0.0 3.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit RuvB_N PF05496.12 CTQ27301.1 - 8.2e-06 25.6 5.9 0.066 13.0 0.3 4.6 3 2 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 CTQ27301.1 - 8.3e-06 25.9 0.0 0.016 15.2 0.0 2.8 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 CTQ27301.1 - 1.7e-05 24.2 0.1 0.23 10.6 0.0 2.7 2 1 0 2 2 2 2 TIP49 P-loop domain AAA_7 PF12775.7 CTQ27301.1 - 2.3e-05 24.0 0.0 0.23 11.0 0.0 2.8 3 0 0 3 3 3 2 P-loop containing dynein motor region IstB_IS21 PF01695.17 CTQ27301.1 - 3.2e-05 23.7 0.0 0.076 12.7 0.0 2.6 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_18 PF13238.6 CTQ27301.1 - 6.5e-05 23.5 0.2 0.053 14.1 0.0 3.1 3 0 0 3 3 3 1 AAA domain AAA_3 PF07726.11 CTQ27301.1 - 0.00016 21.6 0.2 0.0022 17.8 0.1 2.6 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_6 PF12774.7 CTQ27301.1 - 0.00019 20.5 0.0 0.00044 19.3 0.0 1.5 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_25 PF13481.6 CTQ27301.1 - 0.00021 21.0 0.1 0.44 10.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 CTQ27301.1 - 0.00032 20.9 0.0 0.084 13.0 0.0 2.8 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 CTQ27301.1 - 0.00032 20.2 3.4 4.1 6.7 0.1 4.3 3 2 2 5 5 5 1 Magnesium chelatase, subunit ChlI TsaE PF02367.17 CTQ27301.1 - 0.0006 19.8 0.1 0.37 10.8 0.1 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 CTQ27301.1 - 0.0023 18.3 0.0 1.9 8.9 0.0 2.7 2 0 0 2 2 2 1 RNA helicase RsgA_GTPase PF03193.16 CTQ27301.1 - 0.0029 17.5 0.0 1.2 9.0 0.0 2.5 2 0 0 2 2 2 1 RsgA GTPase CbiA PF01656.23 CTQ27301.1 - 0.0075 16.3 0.2 2 8.5 0.0 2.7 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_29 PF13555.6 CTQ27301.1 - 0.011 15.4 0.0 3.1 7.6 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain NACHT PF05729.12 CTQ27301.1 - 0.02 14.8 0.0 0.28 11.1 0.0 2.6 2 0 0 2 2 2 0 NACHT domain IPT PF01745.16 CTQ27301.1 - 0.04 13.3 0.0 0.14 11.5 0.0 1.9 2 0 0 2 2 2 0 Isopentenyl transferase Rad17 PF03215.15 CTQ27301.1 - 0.042 13.8 0.0 1 9.2 0.0 2.4 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_23 PF13476.6 CTQ27301.1 - 0.047 14.2 2.4 2.8 8.4 0.2 3.3 2 1 1 3 3 3 0 AAA domain Zeta_toxin PF06414.12 CTQ27301.1 - 0.053 12.8 2.0 13 5.0 0.0 3.7 4 1 1 5 5 5 0 Zeta toxin DNA_pol3_delta2 PF13177.6 CTQ27301.1 - 0.057 13.2 0.2 2.5 7.9 0.0 3.5 4 0 0 4 4 4 0 DNA polymerase III, delta subunit ParA PF10609.9 CTQ27301.1 - 0.058 12.8 0.1 10 5.5 0.0 2.4 2 0 0 2 2 2 0 NUBPL iron-transfer P-loop NTPase SRP54 PF00448.22 CTQ27301.1 - 0.066 12.8 0.2 8.5 6.0 0.2 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain CHAD PF05235.14 CTQ27301.1 - 0.083 12.8 0.4 0.21 11.5 0.0 1.9 2 0 0 2 2 2 0 CHAD domain Hpr_kinase_C PF07475.12 CTQ27301.1 - 0.11 12.1 0.0 15 5.1 0.0 2.4 2 0 0 2 2 2 0 HPr Serine kinase C-terminal domain ATPase_2 PF01637.18 CTQ27301.1 - 0.13 12.2 2.6 5.4 6.8 0.1 3.6 3 1 1 4 4 4 0 ATPase domain predominantly from Archaea eIF-1a PF01176.19 CTQ27302.1 - 8e-28 96.0 0.0 8.9e-28 95.9 0.0 1.0 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RsgA_N PF16745.5 CTQ27302.1 - 3e-05 23.7 0.0 3.7e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 RsgA N-terminal domain RNase_II_C_S1 PF18614.1 CTQ27302.1 - 0.016 15.1 0.0 0.035 14.1 0.0 1.8 1 1 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain S1 PF00575.23 CTQ27302.1 - 0.027 14.8 0.1 0.033 14.5 0.1 1.2 1 0 0 1 1 1 0 S1 RNA binding domain Myosin_N PF02736.19 CTQ27302.1 - 0.053 13.4 0.0 5.2 7.0 0.0 2.3 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain CSD2 PF17876.1 CTQ27302.1 - 0.1 12.8 0.1 5 7.4 0.0 2.6 1 1 2 3 3 3 0 Cold shock domain Leu_Phe_trans PF03588.14 CTQ27303.1 - 4e-71 238.0 0.0 4.6e-71 237.8 0.0 1.0 1 0 0 1 1 1 1 Leucyl/phenylalanyl-tRNA protein transferase ABC_tran PF00005.27 CTQ27304.1 - 1.7e-33 116.0 0.1 3.9e-33 114.9 0.0 1.6 2 0 0 2 2 1 1 ABC transporter ABC_membrane PF00664.23 CTQ27304.1 - 3.9e-11 43.1 6.1 1.2e-10 41.5 6.0 1.7 1 1 0 1 1 1 1 ABC transporter transmembrane region AAA_21 PF13304.6 CTQ27304.1 - 6.1e-07 29.5 1.2 0.0048 16.8 0.3 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ27304.1 - 8.9e-05 22.0 0.0 0.0071 15.8 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain DUF87 PF01935.17 CTQ27304.1 - 0.00027 21.1 0.0 0.00049 20.3 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_16 PF13191.6 CTQ27304.1 - 0.00039 20.9 1.0 0.0012 19.3 1.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 CTQ27304.1 - 0.0024 17.8 0.3 0.013 15.4 0.0 2.2 2 0 0 2 2 2 1 NACHT domain MMR_HSR1 PF01926.23 CTQ27304.1 - 0.0092 16.1 0.0 0.022 14.8 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 CTQ27304.1 - 0.0099 16.2 0.5 0.048 13.9 0.5 2.2 1 1 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 CTQ27304.1 - 0.012 15.0 0.0 0.041 13.2 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family RsgA_GTPase PF03193.16 CTQ27304.1 - 0.022 14.7 0.0 0.05 13.5 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 CTQ27304.1 - 0.036 13.8 0.0 0.097 12.4 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ27304.1 - 0.051 14.1 0.1 0.098 13.1 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ27304.1 - 0.058 13.0 0.0 0.17 11.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ27304.1 - 0.063 13.0 0.0 0.15 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 CTQ27304.1 - 0.1 12.6 0.0 0.26 11.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF4337 PF14235.6 CTQ27304.1 - 2.9 8.0 6.0 1.7 8.7 3.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) ABC_membrane PF00664.23 CTQ27305.1 - 1.7e-47 162.3 3.5 2.3e-47 161.9 3.5 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 CTQ27305.1 - 2e-25 89.9 0.0 3.7e-25 89.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ27305.1 - 6e-06 26.3 2.9 0.1 12.4 0.2 3.0 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ27305.1 - 5.4e-05 23.6 1.2 0.00012 22.5 0.7 1.8 2 0 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 CTQ27305.1 - 8.1e-05 22.2 0.1 0.14 11.5 0.0 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ27305.1 - 0.00014 21.8 0.0 0.00032 20.7 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 CTQ27305.1 - 0.00071 19.9 0.0 0.0037 17.5 0.0 2.2 1 1 0 1 1 1 1 AAA domain AIG1 PF04548.16 CTQ27305.1 - 0.0042 16.4 0.0 0.0065 15.8 0.0 1.3 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 CTQ27305.1 - 0.0047 17.0 0.5 0.0083 16.2 0.5 1.4 1 0 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.23 CTQ27305.1 - 0.0051 16.9 0.2 0.011 15.8 0.2 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 CTQ27305.1 - 0.0089 15.8 0.0 0.022 14.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.12 CTQ27305.1 - 0.02 14.2 0.0 0.037 13.3 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin ICE2 PF08426.10 CTQ27305.1 - 0.023 13.8 1.8 0.038 13.1 1.8 1.2 1 0 0 1 1 1 0 ICE2 T2SSE PF00437.20 CTQ27305.1 - 0.039 13.0 0.0 0.085 11.9 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 CTQ27305.1 - 0.042 13.2 0.0 0.075 12.4 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family ABC_ATPase PF09818.9 CTQ27305.1 - 0.061 12.1 0.0 0.34 9.7 0.0 1.9 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_25 PF13481.6 CTQ27305.1 - 0.076 12.6 0.0 0.26 10.8 0.0 2.1 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 CTQ27305.1 - 0.089 12.3 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Roc PF08477.13 CTQ27305.1 - 0.092 13.0 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_24 PF13479.6 CTQ27305.1 - 0.097 12.4 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CTQ27305.1 - 0.12 12.6 0.2 0.51 10.5 0.2 2.1 1 1 0 1 1 1 0 AAA domain Pyr_redox_2 PF07992.14 CTQ27306.1 - 7.2e-51 173.2 0.1 8.4e-51 172.9 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ27306.1 - 6.5e-21 74.9 0.0 6.3e-17 61.8 0.0 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ27306.1 - 1.8e-18 66.8 2.2 2.5e-17 63.2 0.4 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ27306.1 - 4e-06 25.8 0.1 0.21 10.2 0.1 4.1 4 1 1 5 5 5 2 HI0933-like protein GIDA PF01134.22 CTQ27306.1 - 2.2e-05 23.7 3.2 0.043 12.9 0.1 3.8 4 0 0 4 4 4 2 Glucose inhibited division protein A FAD_binding_2 PF00890.24 CTQ27306.1 - 6e-05 22.3 4.3 0.0058 15.8 0.1 3.1 3 1 1 4 4 4 2 FAD binding domain FAD_oxidored PF12831.7 CTQ27306.1 - 0.00065 19.2 0.0 0.0011 18.4 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 CTQ27306.1 - 0.00067 19.3 0.0 4.2 6.8 0.0 3.6 4 0 0 4 4 4 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 CTQ27306.1 - 0.012 15.0 0.3 0.79 9.0 0.1 2.2 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain K_oxygenase PF13434.6 CTQ27306.1 - 0.012 14.8 0.0 0.071 12.2 0.0 2.1 1 1 1 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Thi4 PF01946.17 CTQ27306.1 - 0.017 14.4 0.1 0.11 11.7 0.1 2.1 2 0 0 2 2 2 0 Thi4 family NAD_binding_8 PF13450.6 CTQ27306.1 - 0.022 15.0 0.0 0.09 13.0 0.0 2.1 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain FMO-like PF00743.19 CTQ27306.1 - 0.023 13.1 0.0 0.031 12.7 0.0 1.2 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like NAD_binding_7 PF13241.6 CTQ27306.1 - 0.039 14.4 0.0 0.47 10.9 0.0 2.2 2 0 0 2 2 2 0 Putative NAD(P)-binding Shikimate_DH PF01488.20 CTQ27306.1 - 0.04 14.0 0.1 2.2 8.4 0.0 2.6 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Trp_halogenase PF04820.14 CTQ27306.1 - 0.11 11.3 0.3 0.76 8.6 0.1 2.0 2 0 0 2 2 2 0 Tryptophan halogenase AsnC_trans_reg PF01037.21 CTQ27308.1 - 3.2e-25 87.9 0.1 9.3e-25 86.4 0.0 1.7 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 CTQ27308.1 - 1.2e-21 76.0 0.5 3e-21 74.7 0.4 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 CTQ27308.1 - 5.3e-20 71.0 0.4 8.4e-20 70.3 0.4 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR PF01047.22 CTQ27308.1 - 0.0032 17.3 0.0 0.0063 16.4 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 CTQ27308.1 - 0.018 14.9 0.0 0.031 14.1 0.0 1.4 1 0 0 1 1 1 0 MarR family LexA_DNA_bind PF01726.16 CTQ27308.1 - 0.067 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain HTH_Crp_2 PF13545.6 CTQ27308.1 - 0.07 13.1 0.0 0.24 11.4 0.0 1.9 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain E3_UFM1_ligase PF09743.9 CTQ27308.1 - 0.082 12.5 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 Fe_dep_repress PF01325.19 CTQ27308.1 - 0.11 12.7 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain FtsK_SpoIIIE PF01580.18 CTQ27309.1 - 1.2e-74 250.7 0.0 1.8e-74 250.1 0.0 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family FtsK_4TM PF13491.6 CTQ27309.1 - 1.1e-41 142.4 14.2 1.6e-41 141.9 14.2 1.2 1 0 0 1 1 1 1 4TM region of DNA translocase FtsK/SpoIIIE FtsK_alpha PF17854.1 CTQ27309.1 - 5.2e-29 100.4 0.0 9.6e-29 99.5 0.0 1.5 1 0 0 1 1 1 1 FtsK alpha domain FtsK_gamma PF09397.10 CTQ27309.1 - 2.3e-28 97.7 0.1 4.5e-28 96.8 0.1 1.5 1 0 0 1 1 1 1 Ftsk gamma domain AAA_10 PF12846.7 CTQ27309.1 - 6.3e-05 22.1 0.0 0.0059 15.6 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain DUF87 PF01935.17 CTQ27309.1 - 0.00066 19.8 0.1 0.0014 18.7 0.1 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain TniB PF05621.11 CTQ27309.1 - 0.018 14.5 0.0 11 5.4 0.0 3.0 3 0 0 3 3 3 0 Bacterial TniB protein T2SSE PF00437.20 CTQ27309.1 - 0.018 14.1 0.0 0.037 13.1 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein TrwB_AAD_bind PF10412.9 CTQ27309.1 - 0.034 13.0 0.1 0.23 10.3 0.0 1.9 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 CTQ27309.1 - 0.13 12.5 0.0 0.67 10.2 0.0 2.1 1 1 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 CTQ27309.1 - 0.2 10.4 0.0 0.31 9.8 0.0 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein LolA PF03548.15 CTQ27310.1 - 5.1e-58 195.4 4.7 5.9e-58 195.2 4.7 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA DUF2092 PF09865.9 CTQ27310.1 - 1.4e-05 24.5 0.1 0.017 14.5 0.0 2.2 2 0 0 2 2 2 2 Predicted periplasmic protein (DUF2092) DUF1964 PF09244.10 CTQ27310.1 - 0.01 16.3 0.4 0.17 12.3 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1964) DUF5024 PF16427.5 CTQ27310.1 - 0.073 13.4 0.2 0.17 12.3 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5024) Dr_adhesin PF12393.8 CTQ27310.1 - 0.11 12.9 1.1 0.23 11.8 1.1 1.5 1 0 0 1 1 1 0 Dr family adhesin MgsA_C PF12002.8 CTQ27311.1 - 1.2e-66 223.8 1.0 2.3e-66 222.8 1.0 1.5 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal AAA_assoc_2 PF16193.5 CTQ27311.1 - 1.1e-23 83.4 0.9 2.3e-23 82.3 0.2 2.0 2 0 0 2 2 1 1 AAA C-terminal domain AAA PF00004.29 CTQ27311.1 - 5.7e-18 65.6 0.1 3.8e-17 62.9 0.0 2.1 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 CTQ27311.1 - 2.4e-14 53.4 0.0 4.5e-14 52.5 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 CTQ27311.1 - 1.3e-07 32.2 0.5 0.00039 20.9 0.1 3.4 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 CTQ27311.1 - 5.2e-07 29.8 0.1 9.9e-06 25.6 0.1 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 CTQ27311.1 - 5.6e-07 29.1 0.2 0.0013 18.2 0.1 2.4 1 1 1 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 CTQ27311.1 - 7.9e-06 25.7 0.0 0.01 15.5 0.0 2.4 1 1 1 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 CTQ27311.1 - 1.7e-05 25.1 1.5 0.066 13.5 0.0 3.1 1 1 2 3 3 3 2 AAA domain AAA_30 PF13604.6 CTQ27311.1 - 0.00011 22.0 0.5 0.0034 17.1 0.5 2.5 1 1 0 1 1 1 1 AAA domain AAA_3 PF07726.11 CTQ27311.1 - 0.00012 21.9 0.0 0.00079 19.3 0.0 2.3 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 CTQ27311.1 - 0.00014 22.2 0.0 0.03 14.6 0.1 2.5 1 1 1 2 2 2 1 AAA domain IstB_IS21 PF01695.17 CTQ27311.1 - 0.00041 20.1 0.0 0.00093 19.0 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_2 PF07724.14 CTQ27311.1 - 0.00054 20.1 0.0 0.0018 18.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_14 PF13173.6 CTQ27311.1 - 0.0009 19.3 0.0 0.0021 18.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 CTQ27311.1 - 0.0011 19.0 0.2 0.66 10.0 0.1 2.5 2 1 1 3 3 2 1 Type III restriction enzyme, res subunit Sigma54_activ_2 PF14532.6 CTQ27311.1 - 0.0012 19.0 0.0 0.0021 18.2 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain DNA_pol3_delta2 PF13177.6 CTQ27311.1 - 0.0033 17.2 0.0 0.073 12.9 0.0 2.1 1 1 1 2 2 2 1 DNA polymerase III, delta subunit RNA_helicase PF00910.22 CTQ27311.1 - 0.0035 17.7 0.0 0.12 12.8 0.0 2.4 2 0 0 2 2 2 1 RNA helicase ABC_tran PF00005.27 CTQ27311.1 - 0.0036 17.8 0.0 0.0065 17.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_24 PF13479.6 CTQ27311.1 - 0.0037 17.0 0.0 0.007 16.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CTQ27311.1 - 0.0076 16.4 0.1 0.03 14.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 CTQ27311.1 - 0.0081 16.4 0.0 0.032 14.5 0.0 2.1 2 0 0 2 2 1 1 AAA domain DUF815 PF05673.13 CTQ27311.1 - 0.0083 15.3 0.0 0.013 14.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 CTQ27311.1 - 0.012 16.1 0.0 0.029 14.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 CTQ27311.1 - 0.013 15.2 0.0 0.069 12.8 0.0 2.2 3 0 0 3 3 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_11 PF13086.6 CTQ27311.1 - 0.021 14.6 0.0 0.043 13.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ27311.1 - 0.043 13.4 0.0 0.11 12.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 CTQ27311.1 - 0.08 12.3 0.0 2.2 7.7 0.0 2.8 1 1 2 3 3 3 0 Bacterial TniB protein NACHT PF05729.12 CTQ27311.1 - 0.1 12.5 0.0 0.33 10.8 0.0 1.9 2 0 0 2 2 2 0 NACHT domain NTPase_1 PF03266.15 CTQ27311.1 - 0.14 12.0 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 NTPase DUF2075 PF09848.9 CTQ27311.1 - 0.16 11.1 0.6 1.4 8.1 0.5 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Parvo_NS1 PF01057.17 CTQ27311.1 - 0.2 10.7 0.0 0.94 8.5 0.0 2.0 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 tRNA-synt_2b PF00587.25 CTQ27312.1 - 1.6e-36 125.9 0.0 2.4e-36 125.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 CTQ27312.1 - 3.4e-33 114.1 3.7 5.8e-33 113.4 3.7 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Filament PF00038.21 CTQ27312.1 - 0.022 14.3 1.6 0.04 13.5 1.6 1.3 1 0 0 1 1 1 0 Intermediate filament protein I_LWEQ PF01608.17 CTQ27312.1 - 0.11 12.7 0.8 1.1 9.5 0.0 2.4 2 1 1 3 3 3 0 I/LWEQ domain Apt1 PF10351.9 CTQ27312.1 - 0.18 10.7 0.2 0.33 9.8 0.2 1.3 1 0 0 1 1 1 0 Golgi-body localisation protein domain Phage_GP20 PF06810.11 CTQ27312.1 - 0.21 11.4 1.6 0.41 10.5 1.6 1.5 1 1 0 1 1 1 0 Phage minor structural protein GP20 Stathmin PF00836.19 CTQ27312.1 - 0.26 11.3 3.0 0.51 10.3 3.0 1.4 1 0 0 1 1 1 0 Stathmin family FAM184 PF15665.5 CTQ27312.1 - 0.37 10.5 2.8 0.72 9.6 2.8 1.4 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Tropomyosin_1 PF12718.7 CTQ27312.1 - 0.54 10.4 5.6 0.49 10.5 3.6 1.9 2 0 0 2 2 2 0 Tropomyosin like Cep57_CLD_2 PF14197.6 CTQ27312.1 - 1.8 8.7 7.1 6.3 7.0 7.1 1.9 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 TMF_TATA_bd PF12325.8 CTQ27312.1 - 2.3 8.5 8.1 2.1 8.6 4.8 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding Molybdopterin PF00384.22 CTQ27313.1 - 3e-108 362.6 0.0 3.5e-108 362.3 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ27313.1 - 1.3e-28 99.2 0.0 4.1e-28 97.6 0.0 1.9 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 CTQ27313.1 - 4.7e-18 64.9 1.2 8.8e-18 64.1 1.2 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain DmsC PF04976.12 CTQ27314.1 - 2.6e-100 335.4 21.7 3e-100 335.3 21.7 1.0 1 0 0 1 1 1 1 DMSO reductase anchor subunit (DmsC) Anti-adapt_IraP PF10796.9 CTQ27314.1 - 0.075 13.6 0.0 0.17 12.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-S stabilisation anti-adaptor protein CAAD PF14159.6 CTQ27314.1 - 0.12 12.3 0.2 0.12 12.3 0.2 2.8 3 0 0 3 3 3 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DUF998 PF06197.13 CTQ27314.1 - 1.5 8.4 37.9 0.013 15.1 11.4 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF998) MFS_1 PF07690.16 CTQ27316.1 - 1.5e-26 93.2 50.7 2.1e-13 50.0 18.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ27316.1 - 5.7e-11 42.3 33.8 1.4e-10 41.1 33.8 1.6 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Sugar_tr PF00083.24 CTQ27316.1 - 1.7e-07 30.5 14.4 1.7e-07 30.5 14.4 3.2 2 1 0 2 2 2 1 Sugar (and other) transporter MFS_1_like PF12832.7 CTQ27316.1 - 0.00041 19.3 31.0 0.0014 17.6 8.9 2.1 1 1 1 2 2 2 2 MFS_1 like family MFS_2 PF13347.6 CTQ27316.1 - 0.35 9.4 34.0 0.011 14.4 11.0 3.1 1 1 1 3 3 3 0 MFS/sugar transport protein Nterm_IS4 PF13006.7 CTQ27316.1 - 0.47 10.7 2.2 0.43 10.8 0.1 2.0 2 0 0 2 2 2 0 Insertion element 4 transposase N-terminal MFS_3 PF05977.13 CTQ27316.1 - 4.7 5.5 27.6 1.7 7.0 13.8 2.1 2 0 0 2 2 2 0 Transmembrane secretion effector Radical_SAM PF04055.21 CTQ27317.1 - 2.7e-32 112.5 0.1 3.6e-32 112.0 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 CTQ27317.1 - 2.1e-18 66.9 0.1 2.9e-18 66.5 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 CTQ27317.1 - 4.1e-06 26.9 0.3 7.5e-06 26.1 0.1 1.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Prot_ATP_ID_OB PF16450.5 CTQ27317.1 - 0.17 11.9 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Proteasomal ATPase OB C-terminal domain PFL-like PF02901.15 CTQ27318.1 - 4.5e-207 689.7 0.1 6.4e-207 689.2 0.1 1.2 1 0 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 CTQ27318.1 - 1.9e-43 147.3 0.0 5.5e-43 145.8 0.0 1.9 1 0 0 1 1 1 1 Glycine radical Form_Nir_trans PF01226.17 CTQ27319.1 - 8.1e-76 254.5 29.4 9.4e-76 254.3 29.4 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter PEMT PF04191.13 CTQ27319.1 - 0.57 10.6 12.2 0.21 12.0 0.5 3.3 2 2 1 3 3 3 0 Phospholipid methyltransferase Keratin_assoc PF09775.9 CTQ27319.1 - 5 6.8 18.3 0.32 10.6 3.1 3.6 2 1 2 4 4 4 0 Keratinocyte-associated protein 2 YcaO PF02624.16 CTQ27320.1 - 4.1e-82 276.0 0.0 8.6e-82 275.0 0.0 1.5 2 0 0 2 2 2 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding YcaO_C PF18381.1 CTQ27320.1 - 2.9e-67 225.9 0.3 4e-67 225.4 0.3 1.2 1 0 0 1 1 1 1 YcaO cyclodehydratase C-terminal domain DUF421 PF04239.12 CTQ27321.1 - 1.4e-15 57.0 0.0 1.9e-15 56.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF421) Spt4 PF06093.13 CTQ27321.1 - 0.01 15.9 0.7 0.017 15.2 0.7 1.4 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger XK-related PF09815.9 CTQ27321.1 - 0.12 11.4 1.3 0.18 10.8 1.3 1.2 1 0 0 1 1 1 0 XK-related protein Zn_Tnp_IS1595 PF12760.7 CTQ27321.1 - 0.55 10.3 5.9 0.74 9.8 0.4 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Aminotran_5 PF00266.19 CTQ27323.1 - 4.2e-70 236.6 0.0 4.8e-70 236.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V G-gamma PF00631.22 CTQ27323.1 - 0.028 14.4 0.0 0.11 12.6 0.0 1.9 2 0 0 2 2 2 0 GGL domain EPSP_synthase PF00275.20 CTQ27324.1 - 2.5e-156 520.6 0.0 2.8e-156 520.4 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Cytidylate_kin PF02224.18 CTQ27325.1 - 5.2e-83 277.9 0.0 5.9e-83 277.8 0.0 1.0 1 0 0 1 1 1 1 Cytidylate kinase Cytidylate_kin2 PF13189.6 CTQ27325.1 - 9.2e-09 35.7 0.4 2.6e-08 34.2 0.4 1.7 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_17 PF13207.6 CTQ27325.1 - 0.0003 21.2 1.7 0.025 15.0 1.7 2.6 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CTQ27325.1 - 0.00098 19.7 0.0 0.0034 17.9 0.0 2.0 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 CTQ27325.1 - 0.0039 17.3 1.0 0.29 11.2 0.1 3.0 3 0 0 3 3 3 1 Shikimate kinase AAA_33 PF13671.6 CTQ27325.1 - 0.01 16.0 0.2 0.046 13.9 0.2 2.2 1 1 0 1 1 1 0 AAA domain ATP_bind_2 PF03668.15 CTQ27325.1 - 0.012 14.9 0.2 0.068 12.5 0.0 1.9 1 1 0 2 2 2 0 P-loop ATPase protein family ADK PF00406.22 CTQ27325.1 - 0.018 15.1 0.0 0.038 14.1 0.0 1.5 1 0 0 1 1 1 0 Adenylate kinase dNK PF01712.19 CTQ27325.1 - 0.02 14.7 0.1 0.083 12.7 0.0 1.9 2 1 0 2 2 2 0 Deoxynucleoside kinase ABC_tran PF00005.27 CTQ27325.1 - 0.024 15.2 0.0 0.045 14.3 0.0 1.5 1 1 0 1 1 1 0 ABC transporter TsaE PF02367.17 CTQ27325.1 - 0.046 13.7 0.1 0.093 12.7 0.1 1.5 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE S1 PF00575.23 CTQ27326.1 - 7e-100 327.5 36.6 1e-21 77.0 0.7 6.1 6 0 0 6 6 6 6 S1 RNA binding domain PCB_OB PF17092.5 CTQ27326.1 - 1.4e-11 45.1 13.5 0.01 16.6 0.1 6.7 2 1 5 7 7 7 4 Penicillin-binding protein OB-like domain S1_2 PF13509.6 CTQ27326.1 - 0.00018 21.5 9.4 7.3 6.7 0.2 6.2 5 2 0 5 5 5 3 S1 domain CsrA PF02599.16 CTQ27326.1 - 0.003 17.5 4.3 1.9 8.5 0.0 4.5 4 0 0 4 4 4 2 Global regulator protein family BPL_C PF02237.17 CTQ27326.1 - 0.49 10.3 15.0 28 4.7 0.4 6.9 7 0 0 7 7 7 0 Biotin protein ligase C terminal domain DUF1344 PF07076.11 CTQ27326.1 - 2.5 8.1 9.6 1.5 8.8 0.4 4.6 5 1 0 5 5 5 0 Protein of unknown function (DUF1344) Bac_DNA_binding PF00216.21 CTQ27327.1 - 3e-30 104.3 0.0 3.3e-30 104.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 CTQ27327.1 - 1.3e-08 35.0 0.0 1.4e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 CTQ27327.1 - 0.00015 21.5 0.0 0.00021 21.1 0.0 1.2 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 CTQ27327.1 - 0.014 15.5 0.0 0.015 15.4 0.0 1.1 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 1 HU-DNA_bdg PF14848.6 CTQ27327.1 - 0.068 13.2 0.0 0.13 12.3 0.0 1.5 1 1 0 1 1 1 0 DNA-binding domain HU-CCDC81_euk_2 PF18289.1 CTQ27327.1 - 0.12 12.6 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 Ribosomal_L27_C PF18471.1 CTQ27327.1 - 0.2 11.1 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal L27 protein C-terminal domain Competence PF03772.16 CTQ27328.1 - 9.2e-53 179.3 40.7 9.2e-53 179.3 40.7 1.8 2 0 0 2 2 2 1 Competence protein Lactamase_B PF00753.27 CTQ27328.1 - 6.2e-18 65.5 0.4 1e-17 64.8 0.4 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily DUF4131 PF13567.6 CTQ27328.1 - 0.00017 21.3 9.5 0.00017 21.3 9.5 7.2 3 3 2 5 5 5 1 Domain of unknown function (DUF4131) Lactamase_B_2 PF12706.7 CTQ27328.1 - 0.0011 18.6 0.3 0.0026 17.3 0.3 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain ABC_membrane PF00664.23 CTQ27329.1 - 1.2e-60 205.5 15.3 1.6e-60 205.1 15.3 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 CTQ27329.1 - 1.3e-36 126.1 0.2 1.2e-35 123.1 0.0 2.2 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 CTQ27329.1 - 1.1e-09 38.1 6.9 1.7e-09 37.5 3.9 2.4 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ27329.1 - 6e-06 26.7 0.1 1.1e-05 25.8 0.1 1.4 1 0 0 1 1 1 1 AAA ATPase domain DEAD PF00270.29 CTQ27329.1 - 4.7e-05 23.2 0.4 0.00013 21.8 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Zeta_toxin PF06414.12 CTQ27329.1 - 0.00043 19.6 0.1 0.0018 17.6 0.0 2.0 2 0 0 2 2 2 1 Zeta toxin AAA_22 PF13401.6 CTQ27329.1 - 0.0015 18.8 0.3 0.034 14.4 0.3 2.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ27329.1 - 0.0042 16.8 0.1 0.014 15.1 0.1 1.9 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ27329.1 - 0.0046 16.7 0.0 0.0082 15.9 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain DUF87 PF01935.17 CTQ27329.1 - 0.0047 17.1 0.9 0.014 15.5 0.3 2.1 2 1 0 2 2 2 1 Helicase HerA, central domain APS_kinase PF01583.20 CTQ27329.1 - 0.006 16.5 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_24 PF13479.6 CTQ27329.1 - 0.0086 15.8 0.0 0.018 14.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain DUF2075 PF09848.9 CTQ27329.1 - 0.013 14.7 0.1 0.022 14.0 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RsgA_GTPase PF03193.16 CTQ27329.1 - 0.016 15.1 0.1 0.05 13.5 0.0 1.8 2 0 0 2 2 1 0 RsgA GTPase AAA_30 PF13604.6 CTQ27329.1 - 0.017 14.8 0.0 0.049 13.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ27329.1 - 0.019 14.5 0.2 0.065 12.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 CTQ27329.1 - 0.021 15.4 0.1 0.073 13.6 0.1 2.1 1 1 0 1 1 1 0 AAA domain ABC_membrane_2 PF06472.15 CTQ27329.1 - 0.022 14.2 4.9 0.02 14.3 3.6 1.6 1 1 0 1 1 1 0 ABC transporter transmembrane region 2 NB-ARC PF00931.22 CTQ27329.1 - 0.029 13.5 0.0 0.13 11.4 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain AAA PF00004.29 CTQ27329.1 - 0.03 14.7 0.0 0.36 11.2 0.0 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.6 CTQ27329.1 - 0.043 13.6 0.7 1.4 8.6 0.1 2.2 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 CTQ27329.1 - 0.12 12.5 0.0 0.41 10.8 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 CTQ27329.1 - 0.13 12.7 0.2 0.65 10.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain Noelin-1 PF12308.8 CTQ27329.1 - 0.34 10.9 1.1 2 8.4 0.1 2.5 2 0 0 2 2 2 0 Neurogenesis glycoprotein LpxK PF02606.14 CTQ27330.1 - 2.7e-113 378.4 0.1 3.3e-113 378.1 0.1 1.0 1 0 0 1 1 1 1 Tetraacyldisaccharide-1-P 4'-kinase AAA_26 PF13500.6 CTQ27330.1 - 0.012 15.5 0.0 0.032 14.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain MobB PF03205.14 CTQ27330.1 - 0.012 15.5 0.0 0.084 12.8 0.0 2.3 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B Glyco_transf_4 PF13439.6 CTQ27330.1 - 0.05 13.6 0.3 0.16 12.0 0.3 1.9 1 1 0 1 1 1 0 Glycosyltransferase Family 4 HTH_42 PF06224.12 CTQ27331.1 - 1.8e-75 254.5 10.0 2.1e-75 254.3 10.0 1.0 1 0 0 1 1 1 1 Winged helix DNA-binding domain Trm112p PF03966.16 CTQ27332.1 - 2.1e-08 34.6 0.3 3.9e-08 33.8 0.3 1.5 1 1 0 1 1 1 1 Trm112p-like protein zf-RRN7 PF11781.8 CTQ27332.1 - 0.0073 16.0 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF2318 PF10080.9 CTQ27332.1 - 0.014 15.5 0.0 0.017 15.3 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) PADR1 PF08063.12 CTQ27332.1 - 0.053 13.3 0.4 0.066 13.0 0.4 1.1 1 0 0 1 1 1 0 PADR1 (NUC008) domain CTP_transf_3 PF02348.19 CTQ27333.1 - 2.3e-72 243.5 0.0 2.6e-72 243.3 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transf_3 PF12804.7 CTQ27333.1 - 2.6e-14 53.9 0.1 3.1e-14 53.7 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.9 CTQ27333.1 - 0.0017 18.2 0.1 0.0042 16.9 0.2 1.6 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2064) APH PF01636.23 CTQ27334.1 - 1.2e-09 38.5 2.9 1.6e-09 38.1 2.9 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Fructosamin_kin PF03881.14 CTQ27334.1 - 0.0017 17.6 0.3 0.0024 17.2 0.3 1.3 1 1 0 1 1 1 1 Fructosamine kinase STAT_alpha PF01017.20 CTQ27334.1 - 0.025 14.5 0.0 0.038 13.9 0.0 1.3 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF218 PF02698.17 CTQ27335.1 - 2.3e-27 95.6 0.0 2.8e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 DUF218 domain Methyltransf_31 PF13847.6 CTQ27336.1 - 1.5e-16 60.6 0.0 2.3e-16 60.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ27336.1 - 3.2e-16 59.8 0.2 5.6e-16 59.0 0.2 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ27336.1 - 4.1e-15 56.0 0.0 6.8e-15 55.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ27336.1 - 9.5e-15 55.0 0.1 1.6e-14 54.3 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ27336.1 - 3.5e-13 50.1 0.1 6.2e-13 49.3 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 CTQ27336.1 - 9.9e-07 28.3 0.0 1.3e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 CTQ27336.1 - 4e-05 23.2 0.0 5.7e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_24 PF13578.6 CTQ27336.1 - 0.00013 22.9 0.1 0.028 15.4 0.1 2.4 2 0 0 2 2 2 1 Methyltransferase domain CMAS PF02353.20 CTQ27336.1 - 0.0029 17.0 0.0 0.004 16.5 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_15 PF09445.10 CTQ27336.1 - 0.0049 16.5 0.0 0.0074 15.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TehB PF03848.14 CTQ27336.1 - 0.006 16.0 0.0 0.009 15.4 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB DREV PF05219.12 CTQ27336.1 - 0.016 14.3 0.0 0.028 13.5 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase 3HCDH_N PF02737.18 CTQ27336.1 - 0.062 13.2 0.0 0.092 12.6 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFRP PF06399.13 CTQ27336.1 - 0.13 12.1 0.0 0.3 11.0 0.0 1.6 1 0 0 1 1 1 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) CheR PF01739.18 CTQ27336.1 - 0.16 11.4 0.0 5.4 6.4 0.0 2.3 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain MukF_M PF17192.4 CTQ27337.1 - 9.4e-85 282.3 5.1 9.4e-85 282.3 5.1 1.8 2 0 0 2 2 2 1 MukF middle domain MukF_C PF17193.4 CTQ27337.1 - 5.8e-79 263.7 0.5 5.8e-79 263.7 0.5 1.8 2 0 0 2 2 2 1 MukF C-terminal domain KicB PF03882.14 CTQ27337.1 - 4.1e-58 194.6 0.3 1e-57 193.3 0.1 1.8 2 0 0 2 2 2 1 MukF winged-helix domain Replic_Relax PF13814.6 CTQ27337.1 - 0.096 12.7 0.0 0.24 11.5 0.0 1.6 1 0 0 1 1 1 0 Replication-relaxation Baculo_PEP_C PF04513.12 CTQ27337.1 - 4 7.5 6.6 8.9 6.3 2.0 2.6 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MukE PF04288.13 CTQ27338.1 - 9.1e-126 417.4 0.7 1e-125 417.2 0.7 1.0 1 0 0 1 1 1 1 MukE-like family DUF4194 PF13835.6 CTQ27338.1 - 0.0029 17.4 1.0 0.048 13.4 1.0 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4194) Tfb2 PF03849.14 CTQ27338.1 - 0.011 14.8 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 0 Transcription factor Tfb2 MukB PF04310.12 CTQ27339.1 - 4.3e-123 409.4 0.2 4.3e-123 409.4 0.2 3.3 4 0 0 4 4 4 1 MukB N-terminal MukB_hinge PF16330.5 CTQ27339.1 - 1.2e-75 252.8 0.1 1.2e-75 252.8 0.1 4.3 3 1 1 4 4 4 1 MukB hinge domain SbcCD_C PF13558.6 CTQ27339.1 - 1.7e-15 57.0 0.2 8.7e-15 54.7 0.0 2.4 2 0 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 CTQ27339.1 - 4e-08 32.9 0.6 9.2e-08 31.7 0.1 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_tran PF00005.27 CTQ27339.1 - 0.31 11.5 0.0 0.31 11.5 0.0 5.9 4 2 0 4 4 4 0 ABC transporter AAA_15 PF13175.6 CTQ27339.1 - 0.32 10.7 0.0 0.32 10.7 0.0 4.3 4 1 0 4 4 4 0 AAA ATPase domain SMC_N PF02463.19 CTQ27339.1 - 1.2 8.5 9.8 3.7 6.9 0.4 3.1 3 1 0 4 4 4 0 RecF/RecN/SMC N terminal domain Sulfotransfer_4 PF17784.1 CTQ27339.1 - 2.1 8.1 7.9 0.48 10.2 3.1 2.5 2 0 0 2 2 2 0 Sulfotransferase domain YkuD PF03734.14 CTQ27340.1 - 2e-30 106.1 0.0 3.2e-30 105.5 0.0 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain PG_binding_1 PF01471.18 CTQ27340.1 - 1.8e-09 37.7 1.9 1e-07 32.1 0.0 2.9 2 0 0 2 2 2 1 Putative peptidoglycan binding domain Peptidase_M15_2 PF05951.13 CTQ27341.1 - 1.6e-61 206.4 0.0 2.1e-61 206.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF882) Peptidase_M15_3 PF08291.11 CTQ27341.1 - 2.3e-12 47.0 0.0 3.4e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase M15 Lactamase_B PF00753.27 CTQ27342.1 - 6.2e-32 111.2 1.8 7.1e-32 111.0 1.8 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_5 PF14597.6 CTQ27342.1 - 0.0017 17.9 0.0 0.056 12.9 0.0 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 CTQ27342.1 - 0.002 17.6 0.1 0.0022 17.5 0.1 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Aminotran_1_2 PF00155.21 CTQ27343.1 - 2e-93 313.5 0.0 2.3e-93 313.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Porin_1 PF00267.21 CTQ27344.1 - 1.5e-126 422.5 32.4 1.6e-126 422.3 32.4 1.0 1 0 0 1 1 1 1 Gram-negative porin OMP_b-brl PF13505.6 CTQ27344.1 - 5.2 7.2 42.9 0.039 14.1 20.6 2.8 1 1 0 2 2 2 0 Outer membrane protein beta-barrel domain tRNA-synt_2 PF00152.20 CTQ27346.1 - 5.1e-82 275.5 0.0 6.1e-82 275.2 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 CTQ27346.1 - 1.3e-12 47.5 0.3 4e-12 45.9 0.2 1.9 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 CTQ27346.1 - 0.0028 17.2 0.1 1.1 8.6 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) HTH_24 PF13412.6 CTQ27347.1 - 4.4e-18 64.6 0.6 7.8e-18 63.8 0.6 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 CTQ27347.1 - 1.7e-15 56.7 0.2 3.2e-15 55.8 0.2 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 CTQ27347.1 - 2.1e-14 53.1 1.9 3.8e-14 52.2 1.9 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR PF01047.22 CTQ27347.1 - 8.6e-08 32.0 0.1 1.6e-07 31.2 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 CTQ27347.1 - 1e-07 31.8 0.3 1.9e-07 30.9 0.3 1.4 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 CTQ27347.1 - 1.2e-07 31.5 0.2 2.1e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 CTQ27347.1 - 1.3e-07 31.5 0.1 1.3e-06 28.3 0.1 2.1 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_5 PF01022.20 CTQ27347.1 - 2.1e-05 24.3 0.0 4.2e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 CTQ27347.1 - 2.3e-05 24.4 0.0 5.9e-05 23.0 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 CTQ27347.1 - 0.00017 21.3 0.0 0.00034 20.3 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain GYD PF08734.11 CTQ27347.1 - 0.0015 18.5 0.0 0.0026 17.7 0.0 1.4 1 0 0 1 1 1 1 GYD domain HTH_23 PF13384.6 CTQ27347.1 - 0.0022 17.7 0.0 0.0037 17.0 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain LexA_DNA_bind PF01726.16 CTQ27347.1 - 0.0023 17.6 0.1 0.0048 16.6 0.1 1.6 1 1 0 1 1 1 1 LexA DNA binding domain Sigma70_r4_2 PF08281.12 CTQ27347.1 - 0.0042 16.7 0.0 0.0077 15.9 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Rrf2 PF02082.20 CTQ27347.1 - 0.0051 17.1 0.1 0.0099 16.2 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_38 PF13936.6 CTQ27347.1 - 0.0059 16.3 0.5 0.013 15.3 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.6 CTQ27347.1 - 0.012 15.8 0.1 0.063 13.5 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain Sigma70_r4 PF04545.16 CTQ27347.1 - 0.013 15.0 0.0 0.023 14.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 TrmB PF01978.19 CTQ27347.1 - 0.02 14.7 0.0 0.041 13.8 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_9 PF08221.11 CTQ27347.1 - 0.022 14.9 0.0 0.043 13.9 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_Mga PF08280.11 CTQ27347.1 - 0.022 14.8 0.0 0.044 13.8 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_Tnp_ISL3 PF13542.6 CTQ27347.1 - 0.028 13.8 0.1 0.049 13.1 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_3 PF01381.22 CTQ27347.1 - 0.044 13.8 0.0 0.08 13.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix HTH_CodY PF08222.11 CTQ27347.1 - 0.058 13.0 0.5 0.096 12.3 0.5 1.5 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_36 PF13730.6 CTQ27347.1 - 0.07 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_19 PF12844.7 CTQ27347.1 - 0.084 12.9 0.2 0.14 12.2 0.2 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_DeoR PF08220.12 CTQ27347.1 - 0.085 12.6 0.1 0.17 11.6 0.1 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Crp PF00325.20 CTQ27347.1 - 0.1 12.3 0.2 1.8 8.3 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family HTH_1 PF00126.27 CTQ27347.1 - 0.14 12.2 0.1 0.32 11.0 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Fe_dep_repress PF01325.19 CTQ27347.1 - 0.15 12.3 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain PALP PF00291.25 CTQ27349.1 - 1.7e-51 175.4 0.0 1.9e-51 175.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Phage_holin_3_3 PF16083.5 CTQ27349.1 - 0.38 10.9 0.1 0.38 10.9 0.1 1.9 2 0 0 2 2 2 0 LydA holin phage, holin superfamily III Trp_Tyr_perm PF03222.13 CTQ27350.1 - 5.4e-14 52.1 27.3 6.7e-14 51.7 27.3 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF3961 PF13106.6 CTQ27350.1 - 0.33 10.6 0.0 0.33 10.6 0.0 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF3961) Saf_2TM PF18303.1 CTQ27350.1 - 1.3 8.6 6.6 3.1 7.4 1.1 3.0 2 1 1 3 3 3 0 SAVED-fused 2TM effector domain MNSV_P7B PF06692.11 CTQ27350.1 - 1.8 8.6 4.7 4.3 7.4 0.1 3.4 3 0 0 3 3 3 0 Melon necrotic spot virus P7B protein Peptidase_M20 PF01546.28 CTQ27351.1 - 9.5e-34 116.9 0.3 1.3e-33 116.5 0.3 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 CTQ27351.1 - 3.4e-08 33.4 0.1 7.4e-08 32.3 0.0 1.6 2 0 0 2 2 2 1 Peptidase family M28 M20_dimer PF07687.14 CTQ27351.1 - 0.021 14.8 1.5 0.11 12.5 0.1 2.7 3 0 0 3 3 3 0 Peptidase dimerisation domain Peptidase_M20 PF01546.28 CTQ27352.1 - 8e-30 104.1 0.4 1.1e-29 103.7 0.4 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ27352.1 - 6.8e-06 26.0 0.2 3.2e-05 23.8 0.2 2.0 2 0 0 2 2 2 1 Peptidase dimerisation domain NAPRTase PF04095.16 CTQ27353.1 - 5.2e-82 275.1 0.0 8e-82 274.5 0.0 1.3 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family NAPRTase_N PF17767.1 CTQ27353.1 - 1.1e-35 122.7 0.0 1.9e-35 121.9 0.0 1.4 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DUF3458_C PF17432.2 CTQ27354.1 - 6.4e-121 403.6 9.6 9.3e-121 403.1 9.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3458_C) ARM repeats Peptidase_M1 PF01433.20 CTQ27354.1 - 2.1e-55 187.6 1.6 3.7e-55 186.8 1.6 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain DUF3458 PF11940.8 CTQ27354.1 - 2.7e-33 114.3 0.7 1.3e-32 112.1 0.4 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF3458) Ig-like fold Peptidase_M1_N PF17900.1 CTQ27354.1 - 3.1e-16 60.1 0.0 1e-15 58.5 0.0 1.8 2 0 0 2 2 2 1 Peptidase M1 N-terminal domain Ovate PF04844.13 CTQ27354.1 - 0.014 15.3 0.0 0.053 13.5 0.0 1.9 1 0 0 1 1 1 0 Transcriptional repressor, ovate DUF2063 PF09836.9 CTQ27354.1 - 0.046 14.0 0.2 1.4 9.2 0.0 3.2 3 0 0 3 3 3 0 Putative DNA-binding domain XPC-binding PF09280.11 CTQ27354.1 - 0.093 12.5 0.1 6 6.7 0.3 2.5 2 0 0 2 2 2 0 XPC-binding domain PMEI PF04043.15 CTQ27354.1 - 0.13 12.6 1.0 0.31 11.4 0.4 1.9 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor DNA_methylase PF00145.17 CTQ27354.1 - 0.17 11.2 0.0 12 5.1 0.0 2.3 2 0 0 2 2 2 0 C-5 cytosine-specific DNA methylase ABC_tran PF00005.27 CTQ27355.1 - 3.4e-29 102.1 0.0 4.6e-29 101.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 CTQ27355.1 - 1.9e-05 25.0 0.0 4.7e-05 23.7 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CTQ27355.1 - 0.00012 22.2 0.0 0.00027 21.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 CTQ27355.1 - 0.00012 22.0 1.1 0.07 12.9 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ27355.1 - 0.00077 19.9 0.3 0.0012 19.3 0.3 1.4 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 CTQ27355.1 - 0.0017 17.8 0.0 0.35 10.2 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_28 PF13521.6 CTQ27355.1 - 0.0023 18.2 0.0 1 9.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 CTQ27355.1 - 0.0035 17.3 0.1 0.0067 16.3 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase ABC_ATPase PF09818.9 CTQ27355.1 - 0.0037 16.1 0.4 1.2 7.8 0.0 2.7 2 1 0 2 2 2 2 Predicted ATPase of the ABC class MMR_HSR1 PF01926.23 CTQ27355.1 - 0.0092 16.1 0.0 0.014 15.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_30 PF13604.6 CTQ27355.1 - 0.013 15.2 0.8 0.15 11.8 0.3 2.2 1 1 0 2 2 2 0 AAA domain AAA_29 PF13555.6 CTQ27355.1 - 0.018 14.8 0.1 0.039 13.7 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DLIC PF05783.11 CTQ27355.1 - 0.042 12.7 0.0 0.058 12.2 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) NB-ARC PF00931.22 CTQ27355.1 - 0.053 12.7 0.1 0.6 9.3 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain AAA_25 PF13481.6 CTQ27355.1 - 0.084 12.4 1.4 0.2 11.2 0.0 2.1 2 1 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 CTQ27355.1 - 0.35 11.1 1.3 2 8.7 0.2 2.5 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit BPD_transp_1 PF00528.22 CTQ27356.1 - 2.3e-28 99.2 12.3 4e-28 98.4 12.3 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Romo1 PF10247.9 CTQ27356.1 - 0.036 14.4 0.1 0.11 12.9 0.1 1.8 1 0 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 Bac_luciferase PF00296.20 CTQ27357.1 - 2.6e-88 296.5 8.2 3.2e-88 296.2 8.2 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase RNA_pol_Rpo13 PF12136.8 CTQ27357.1 - 0.1 12.5 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase Rpo13 subunit HTH domain NMT1 PF09084.11 CTQ27358.1 - 3.1e-12 46.9 0.0 1.3e-11 44.9 0.0 1.8 2 0 0 2 2 2 1 NMT1/THI5 like SBP_bac_3 PF00497.20 CTQ27358.1 - 3.3e-10 39.8 0.0 9.8e-07 28.4 0.0 2.2 1 1 1 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 NMT1_2 PF13379.6 CTQ27358.1 - 3.7e-10 39.9 0.0 3.3e-09 36.8 0.0 2.0 1 1 0 1 1 1 1 NMT1-like family Phosphonate-bd PF12974.7 CTQ27358.1 - 1.7e-07 31.1 0.1 2.8e-07 30.4 0.1 1.3 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1_3 PF16868.5 CTQ27358.1 - 8.1e-07 28.7 0.0 1.4e-05 24.6 0.0 2.1 2 0 0 2 2 2 1 NMT1-like family OpuAC PF04069.12 CTQ27358.1 - 3.7e-05 23.4 0.1 9e-05 22.2 0.0 1.7 2 1 0 2 2 2 1 Substrate binding domain of ABC-type glycine betaine transport system FMN_red PF03358.15 CTQ27359.1 - 5.1e-35 120.5 0.0 6.7e-35 120.1 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 CTQ27359.1 - 5e-09 36.2 0.0 6e-09 35.9 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin-like fold DHO_dh PF01180.21 CTQ27360.1 - 2.3e-91 306.1 0.1 2.8e-91 305.8 0.1 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase ZapC PF07126.12 CTQ27361.1 - 1.8e-68 229.4 0.0 2.1e-68 229.2 0.0 1.0 1 0 0 1 1 1 1 Cell-division protein ZapC MOSC PF03473.17 CTQ27362.1 - 3.1e-29 101.7 0.0 5.8e-29 100.8 0.0 1.4 1 0 0 1 1 1 1 MOSC domain MOSC_N PF03476.16 CTQ27362.1 - 5.6e-27 94.0 0.0 1.3e-26 92.9 0.0 1.6 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain Fer2 PF00111.27 CTQ27362.1 - 2.5e-13 49.8 0.7 4.7e-13 48.9 0.7 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 CTQ27362.1 - 0.036 14.1 0.0 0.068 13.2 0.0 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 CTQ27362.1 - 0.13 12.4 0.0 0.32 11.1 0.0 1.7 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain UPF0020 PF01170.18 CTQ27363.1 - 2.4e-68 229.7 0.0 3.8e-64 216.0 0.0 2.3 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Methyltrans_SAM PF10672.9 CTQ27363.1 - 3e-22 79.1 0.1 4.8e-22 78.4 0.1 1.2 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase THUMP PF02926.17 CTQ27363.1 - 6.9e-18 65.1 0.0 1.2e-17 64.3 0.0 1.3 1 0 0 1 1 1 1 THUMP domain Cons_hypoth95 PF03602.15 CTQ27363.1 - 1.9e-13 50.4 0.0 3.3e-09 36.7 0.0 3.5 3 0 0 3 3 3 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 CTQ27363.1 - 2.9e-10 40.2 0.0 0.00087 19.1 0.0 3.4 3 0 0 3 3 3 2 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ27363.1 - 4.7e-10 40.0 0.0 0.0016 19.1 0.0 3.5 3 0 0 3 3 3 2 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ27363.1 - 1e-07 32.5 0.0 0.007 17.0 0.0 3.0 2 0 0 2 2 2 2 Methyltransferase domain MTS PF05175.14 CTQ27363.1 - 1.2e-07 31.4 0.0 0.0055 16.3 0.0 2.5 2 0 0 2 2 2 2 Methyltransferase small domain AviRa PF11599.8 CTQ27363.1 - 0.044 13.2 0.1 54 3.1 0.0 3.8 4 1 1 5 5 5 0 RRNA methyltransferase AviRa N6_Mtase PF02384.16 CTQ27363.1 - 0.049 12.9 0.0 0.33 10.2 0.0 2.3 2 1 0 2 2 2 0 N-6 DNA Methylase ABC_tran PF00005.27 CTQ27364.1 - 2.7e-51 173.7 0.7 2.7e-25 89.5 0.0 3.7 3 1 0 3 3 3 2 ABC transporter ABC_tran_CTD PF16326.5 CTQ27364.1 - 4.9e-23 81.1 9.7 1.8e-22 79.4 6.4 2.8 2 0 0 2 2 2 1 ABC transporter C-terminal domain AAA_21 PF13304.6 CTQ27364.1 - 9.2e-20 71.6 6.9 4.7e-05 23.3 0.1 4.3 2 2 2 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 CTQ27364.1 - 1.4e-12 47.5 8.0 3.7e-11 42.9 1.4 2.7 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 CTQ27364.1 - 2.5e-10 40.2 0.2 0.00013 21.5 0.0 4.0 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ27364.1 - 4.2e-10 40.0 0.2 0.00012 22.4 0.0 3.9 2 1 0 2 2 2 2 AAA domain AAA_15 PF13175.6 CTQ27364.1 - 7.3e-09 35.8 0.3 0.0028 17.4 0.0 2.6 3 0 0 3 3 2 2 AAA ATPase domain AAA_23 PF13476.6 CTQ27364.1 - 9.4e-08 32.8 5.3 0.07 13.6 0.0 3.9 5 0 0 5 5 3 2 AAA domain AAA_29 PF13555.6 CTQ27364.1 - 1.2e-07 31.3 0.0 0.012 15.3 0.0 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 CTQ27364.1 - 1.3e-07 32.2 4.5 0.00026 21.4 0.0 3.1 3 0 0 3 3 3 2 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ27364.1 - 4.8e-07 29.8 0.0 0.048 13.6 0.1 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_18 PF13238.6 CTQ27364.1 - 4.6e-06 27.2 0.0 0.04 14.5 0.0 3.0 2 1 0 2 2 2 2 AAA domain AAA_30 PF13604.6 CTQ27364.1 - 6.7e-06 25.9 0.1 0.31 10.7 0.0 3.7 3 1 0 3 3 3 2 AAA domain AAA_33 PF13671.6 CTQ27364.1 - 9.8e-06 25.8 0.0 0.19 11.9 0.0 2.8 2 0 0 2 2 2 2 AAA domain ATP-synt_ab PF00006.25 CTQ27364.1 - 1.1e-05 25.2 0.0 0.018 14.7 0.0 2.1 1 1 1 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain MMR_HSR1 PF01926.23 CTQ27364.1 - 1.2e-05 25.3 0.0 0.12 12.4 0.0 2.6 2 0 0 2 2 2 2 50S ribosome-binding GTPase TsaE PF02367.17 CTQ27364.1 - 1.9e-05 24.7 0.1 0.089 12.8 0.1 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 CTQ27364.1 - 2e-05 25.0 0.0 0.018 15.5 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 CTQ27364.1 - 2.5e-05 24.1 0.0 0.19 11.4 0.0 3.2 3 0 0 3 3 3 2 AAA domain AAA_28 PF13521.6 CTQ27364.1 - 2.9e-05 24.4 1.4 0.095 12.9 0.0 3.3 3 1 0 3 3 2 2 AAA domain AAA_7 PF12775.7 CTQ27364.1 - 3.6e-05 23.4 0.0 0.27 10.7 0.0 2.4 2 0 0 2 2 2 2 P-loop containing dynein motor region RNA_helicase PF00910.22 CTQ27364.1 - 4.2e-05 23.9 0.0 0.24 11.8 0.0 2.7 2 0 0 2 2 2 2 RNA helicase NACHT PF05729.12 CTQ27364.1 - 4.6e-05 23.4 1.0 0.34 10.8 1.3 2.9 2 1 0 2 2 2 2 NACHT domain IstB_IS21 PF01695.17 CTQ27364.1 - 7.5e-05 22.5 0.0 0.83 9.4 0.0 3.2 3 0 0 3 3 3 2 IstB-like ATP binding protein Zeta_toxin PF06414.12 CTQ27364.1 - 0.00013 21.3 0.1 1.5 8.1 0.0 3.4 2 1 1 3 3 3 2 Zeta toxin AAA_25 PF13481.6 CTQ27364.1 - 0.00015 21.4 0.2 0.69 9.5 0.0 3.6 4 0 0 4 4 4 1 AAA domain PduV-EutP PF10662.9 CTQ27364.1 - 0.00017 21.4 0.6 0.32 10.7 0.2 2.4 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation AAA_14 PF13173.6 CTQ27364.1 - 0.00023 21.2 0.0 0.24 11.5 0.0 3.2 4 0 0 4 4 2 1 AAA domain AAA_5 PF07728.14 CTQ27364.1 - 0.0003 20.8 0.2 0.4 10.7 0.0 2.9 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_13 PF13166.6 CTQ27364.1 - 0.0005 18.9 0.9 0.31 9.7 0.0 3.2 3 0 0 3 3 3 1 AAA domain ATPase_2 PF01637.18 CTQ27364.1 - 0.00055 19.9 0.0 0.26 11.2 0.0 2.7 3 0 0 3 3 2 1 ATPase domain predominantly from Archaea Roc PF08477.13 CTQ27364.1 - 0.00056 20.1 0.0 1 9.6 0.0 2.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase NB-ARC PF00931.22 CTQ27364.1 - 0.00073 18.8 0.0 0.98 8.5 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain Rad17 PF03215.15 CTQ27364.1 - 0.00074 19.5 0.0 0.45 10.4 0.0 2.4 2 0 0 2 2 2 1 Rad17 P-loop domain MobB PF03205.14 CTQ27364.1 - 0.0012 18.8 0.1 0.089 12.7 0.0 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B RuvB_N PF05496.12 CTQ27364.1 - 0.0022 17.7 0.0 0.87 9.3 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 CTQ27364.1 - 0.0027 16.9 0.0 1.1 8.3 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF815) cobW PF02492.19 CTQ27364.1 - 0.0046 16.6 0.0 2 8.0 0.0 3.1 3 0 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain T2SSE PF00437.20 CTQ27364.1 - 0.0053 15.9 0.0 0.039 13.0 0.0 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein Dynamin_N PF00350.23 CTQ27364.1 - 0.012 15.6 0.1 1.3 9.1 0.0 2.8 3 0 0 3 3 2 0 Dynamin family dNK PF01712.19 CTQ27364.1 - 0.015 15.1 0.1 3.1 7.6 0.0 2.5 2 0 0 2 2 2 0 Deoxynucleoside kinase G-alpha PF00503.20 CTQ27364.1 - 0.02 14.1 0.0 2.7 7.0 0.0 2.4 2 0 0 2 2 2 0 G-protein alpha subunit Phasin PF05597.11 CTQ27364.1 - 0.02 14.9 3.1 0.73 9.9 0.3 2.9 3 0 0 3 3 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) AAA_10 PF12846.7 CTQ27364.1 - 0.03 13.3 0.1 2 7.2 0.0 2.9 2 1 1 3 3 3 0 AAA-like domain NTPase_1 PF03266.15 CTQ27364.1 - 0.037 13.9 4.3 1.5 8.7 0.1 3.3 3 0 0 3 3 3 0 NTPase MeaB PF03308.16 CTQ27364.1 - 0.038 13.0 0.0 7.3 5.5 0.0 2.4 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Arf PF00025.21 CTQ27364.1 - 0.039 13.4 0.4 6.9 6.1 0.0 2.5 2 0 0 2 2 2 0 ADP-ribosylation factor family Pox_A32 PF04665.12 CTQ27364.1 - 0.043 13.3 0.1 8.1 5.8 0.1 3.1 2 1 1 3 3 3 0 Poxvirus A32 protein AAA_19 PF13245.6 CTQ27364.1 - 0.044 14.1 0.4 0.86 9.9 0.6 2.9 2 1 0 2 2 1 0 AAA domain DLIC PF05783.11 CTQ27364.1 - 0.045 12.6 0.1 1.5 7.6 0.0 2.3 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) SRP54 PF00448.22 CTQ27364.1 - 0.049 13.3 0.9 3.5 7.2 0.2 2.9 2 1 1 3 3 3 0 SRP54-type protein, GTPase domain DUF87 PF01935.17 CTQ27364.1 - 0.052 13.6 3.3 4.4 7.3 0.0 3.9 5 0 0 5 5 3 0 Helicase HerA, central domain EF-hand_14 PF17959.1 CTQ27364.1 - 0.091 13.1 0.0 0.32 11.4 0.0 1.9 1 0 0 1 1 1 0 EF-hand domain FeoB_N PF02421.18 CTQ27364.1 - 0.097 12.2 0.3 6.5 6.3 0.0 2.7 3 0 0 3 3 2 0 Ferrous iron transport protein B Septin PF00735.18 CTQ27364.1 - 0.12 11.6 0.0 9.1 5.5 0.0 2.4 2 0 0 2 2 2 0 Septin Laminin_II PF06009.12 CTQ27364.1 - 0.13 12.2 1.5 0.53 10.3 1.5 2.0 1 0 0 1 1 1 0 Laminin Domain II Mg_chelatase PF01078.21 CTQ27364.1 - 0.15 11.5 0.0 4.8 6.5 0.0 2.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI UPF0242 PF06785.11 CTQ27364.1 - 0.22 11.6 3.0 0.22 11.6 0.4 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus AAA_17 PF13207.6 CTQ27364.1 - 1.1 9.6 5.7 39 4.6 0.4 4.1 3 1 0 3 3 3 0 AAA domain NPV_P10 PF05531.12 CTQ27364.1 - 2.1 8.9 6.0 2 8.9 1.5 2.8 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Spectrin PF00435.21 CTQ27364.1 - 6.5 7.3 13.0 1.4 9.4 5.3 3.6 3 1 1 4 4 3 0 Spectrin repeat DUF3584 PF12128.8 CTQ27364.1 - 7.8 3.9 18.4 3.7 4.9 3.7 3.7 3 1 1 4 4 4 0 Protein of unknown function (DUF3584) PqiA PF04403.13 CTQ27365.1 - 1.6e-92 307.4 31.9 2.4e-54 183.4 15.4 2.1 2 0 0 2 2 2 2 Paraquat-inducible protein A DZR PF12773.7 CTQ27365.1 - 0.00054 19.9 10.0 0.044 13.8 2.0 2.5 2 0 0 2 2 2 2 Double zinc ribbon DUF2116 PF09889.9 CTQ27365.1 - 0.15 12.0 0.2 0.15 12.0 0.2 3.7 3 1 0 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Tmemb_55A PF09788.9 CTQ27365.1 - 0.17 11.0 2.0 0.19 10.8 0.2 2.0 2 0 0 2 2 2 0 Transmembrane protein 55A zf-LITAF-like PF10601.9 CTQ27365.1 - 0.25 11.6 0.0 0.25 11.6 0.0 5.3 6 1 0 6 6 5 0 LITAF-like zinc ribbon domain zf-UDP PF14569.6 CTQ27365.1 - 0.83 9.8 4.9 0.83 9.8 0.1 2.3 2 0 0 2 2 2 0 Zinc-binding RING-finger zinc-ribbons_6 PF07191.12 CTQ27365.1 - 1.1 9.3 9.4 2.8 8.0 1.8 2.6 2 1 0 2 2 2 0 zinc-ribbons Spt4 PF06093.13 CTQ27365.1 - 1.4 9.1 5.7 3.2 7.9 1.6 2.5 2 0 0 2 2 2 0 Spt4/RpoE2 zinc finger zinc_ribbon_4 PF13717.6 CTQ27365.1 - 1.9 8.5 8.6 6.7 6.7 2.5 2.8 2 1 0 2 2 2 0 zinc-ribbon domain Anti-TRAP PF15777.5 CTQ27365.1 - 2.3 8.2 6.0 11 6.1 0.2 3.2 3 0 0 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-ribbon_3 PF13248.6 CTQ27365.1 - 3.3 7.2 14.3 3.5 7.2 0.1 3.3 3 0 0 3 3 3 0 zinc-ribbon domain zf_UBZ PF18439.1 CTQ27365.1 - 3.4 7.3 10.2 27 4.5 0.6 3.6 3 1 0 3 3 3 0 Ubiquitin-Binding Zinc Finger Nudix_N_2 PF14803.6 CTQ27365.1 - 7.2 6.6 7.8 1.4 8.9 1.8 2.6 2 1 0 2 2 2 0 Nudix N-terminal HypA PF01155.19 CTQ27365.1 - 7.3 6.7 10.2 7.5 6.6 0.3 2.7 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MlaD PF02470.20 CTQ27366.1 - 5.7e-39 132.3 0.8 2.9e-15 56.3 0.0 3.5 3 0 0 3 3 3 3 MlaD protein DHC_N2 PF08393.13 CTQ27366.1 - 0.00053 19.2 0.4 0.00078 18.7 0.4 1.1 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 DUF948 PF06103.11 CTQ27366.1 - 0.00072 19.8 2.1 0.0036 17.5 1.3 2.2 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF948) Mrpl_C PF18502.1 CTQ27366.1 - 0.0091 16.3 3.1 0.021 15.1 2.7 1.7 1 1 0 1 1 1 1 54S ribosomal protein L8 C-terminal domain DASH_Duo1 PF08651.10 CTQ27366.1 - 0.015 15.1 1.9 0.033 14.0 0.6 2.2 2 1 0 2 2 2 0 DASH complex subunit Duo1 DUF2959 PF11172.8 CTQ27366.1 - 0.15 12.2 1.2 0.26 11.4 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2959) BLOC1_2 PF10046.9 CTQ27366.1 - 0.16 12.3 2.4 0.42 10.9 2.4 1.8 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FUSC PF04632.12 CTQ27366.1 - 0.2 10.2 0.5 0.27 9.7 0.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DHR10 PF18595.1 CTQ27366.1 - 0.22 11.6 1.6 0.49 10.5 1.6 1.5 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain Fzo_mitofusin PF04799.13 CTQ27366.1 - 0.92 9.0 3.3 1.7 8.2 3.3 1.3 1 0 0 1 1 1 0 fzo-like conserved region SlyX PF04102.12 CTQ27366.1 - 4.9 7.8 5.5 7.1 7.3 1.0 2.6 1 1 1 2 2 2 0 SlyX ABC_trans_aux PF03886.13 CTQ27367.1 - 4.6e-39 133.6 5.4 5.3e-39 133.4 5.4 1.0 1 0 0 1 1 1 1 ABC-type transport auxiliary lipoprotein component FabA PF07977.13 CTQ27368.1 - 8.1e-54 181.0 0.0 1e-53 180.7 0.0 1.1 1 0 0 1 1 1 1 FabA-like domain AAA_32 PF13654.6 CTQ27369.1 - 4.6e-23 81.8 0.0 1.1e-22 80.5 0.0 1.5 2 0 0 2 2 2 1 AAA domain Lon_C PF05362.13 CTQ27369.1 - 2.6e-10 40.2 0.0 4.7e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain Sigma54_activat PF00158.26 CTQ27369.1 - 0.09 12.5 0.0 0.23 11.1 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain MatP PF06303.12 CTQ27370.1 - 2.8e-44 149.6 3.0 2.8e-44 149.6 3.0 1.6 2 0 0 2 2 2 1 MatP N-terminal domain MatP_C PF17414.2 CTQ27370.1 - 4.7e-30 103.6 1.2 4.7e-30 103.6 1.2 1.7 2 0 0 2 2 2 1 MatP C-terminal ribbon-helix-helix domain RHH_4 PF13467.6 CTQ27370.1 - 0.00042 20.1 0.1 0.00082 19.2 0.1 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix domain TMF_TATA_bd PF12325.8 CTQ27370.1 - 0.031 14.5 3.1 1.1 9.5 3.1 2.3 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding ELK PF03789.13 CTQ27370.1 - 0.045 13.8 0.2 0.083 13.0 0.2 1.5 1 0 0 1 1 1 0 ELK domain OmpA_membrane PF01389.17 CTQ27371.1 - 1.5e-74 249.7 3.1 2.1e-74 249.2 3.1 1.2 1 0 0 1 1 1 1 OmpA-like transmembrane domain OmpA PF00691.20 CTQ27371.1 - 2.1e-23 82.5 0.0 4.7e-23 81.4 0.0 1.6 1 0 0 1 1 1 1 OmpA family OMP_b-brl PF13505.6 CTQ27371.1 - 4.6e-19 69.2 14.0 6.6e-19 68.7 14.0 1.2 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain DUF2490 PF10677.9 CTQ27371.1 - 0.052 13.5 0.1 0.44 10.5 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2490) SulA PF03846.14 CTQ27372.1 - 2.9e-57 191.6 4.6 3.7e-57 191.2 4.6 1.1 1 0 0 1 1 1 1 Cell division inhibitor SulA TfoX_C PF04994.13 CTQ27374.1 - 2e-26 91.9 0.1 2.9e-26 91.4 0.1 1.2 1 0 0 1 1 1 1 TfoX C-terminal domain TfoX_N PF04993.13 CTQ27374.1 - 6.9e-22 77.5 0.0 1e-21 76.9 0.0 1.3 1 0 0 1 1 1 1 TfoX N-terminal domain FUSC-like PF12805.7 CTQ27375.1 - 5.3e-107 357.1 7.4 5.3e-107 357.1 7.4 3.2 3 1 0 3 3 3 2 FUSC-like inner membrane protein yccS FUSC_2 PF13515.6 CTQ27375.1 - 1.3e-25 89.9 13.0 1.3e-25 89.9 13.0 2.4 2 0 0 2 2 2 1 Fusaric acid resistance protein-like FUSC PF04632.12 CTQ27375.1 - 1.8e-08 33.4 12.3 1.8e-08 33.4 12.3 3.7 2 1 0 3 3 3 2 Fusaric acid resistance protein family ALMT PF11744.8 CTQ27375.1 - 0.0034 16.3 2.7 0.022 13.6 2.8 2.1 1 1 0 1 1 1 1 Aluminium activated malate transporter DUF1664 PF07889.12 CTQ27375.1 - 0.22 11.6 0.0 8 6.5 0.0 3.2 4 0 0 4 4 4 0 Protein of unknown function (DUF1664) YccF PF03733.13 CTQ27376.1 - 2.5e-28 98.5 29.0 3e-18 66.2 14.7 2.1 2 0 0 2 2 2 2 Inner membrane component domain DHHC PF01529.20 CTQ27376.1 - 0.055 13.6 0.6 0.1 12.7 0.6 1.4 1 1 0 1 1 1 0 DHHC palmitoyltransferase Helicase_IV_N PF12462.8 CTQ27377.1 - 2.2e-62 209.8 1.1 2.2e-62 209.8 1.1 2.0 2 0 0 2 2 2 1 DNA helicase IV / RNA helicase N terminal UvrD-helicase PF00580.21 CTQ27377.1 - 1.7e-41 142.8 0.0 4.9e-41 141.3 0.0 1.8 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 CTQ27377.1 - 7.9e-31 107.4 0.0 1.7e-30 106.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain UvrD_C PF13361.6 CTQ27377.1 - 3.2e-13 49.8 0.0 9.9e-13 48.2 0.0 1.8 2 1 0 2 2 2 1 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 CTQ27377.1 - 6.7e-12 45.1 0.1 4e-06 26.6 0.1 2.7 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 CTQ27377.1 - 3.7e-08 33.3 1.0 2.2e-05 24.3 0.7 2.5 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 CTQ27377.1 - 0.0098 16.2 0.1 4.3 7.6 0.1 2.8 2 0 0 2 2 2 1 AAA domain AAA_12 PF13087.6 CTQ27377.1 - 0.013 15.2 0.0 0.054 13.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 CTQ27377.1 - 0.019 14.7 0.1 3.5 7.3 0.1 3.3 2 1 0 2 2 2 0 Viral (Superfamily 1) RNA helicase MRP-L28 PF09812.9 CTQ27377.1 - 0.11 12.6 1.6 0.23 11.6 1.6 1.5 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L28 AAA_16 PF13191.6 CTQ27377.1 - 0.21 12.0 6.2 11 6.4 6.2 3.0 1 1 0 1 1 1 0 AAA ATPase domain MGS PF02142.22 CTQ27378.1 - 1.3e-18 67.0 0.0 1.7e-18 66.6 0.0 1.2 1 0 0 1 1 1 1 MGS-like domain CoA_binding_2 PF13380.6 CTQ27379.1 - 1.2e-39 135.4 0.1 1.3e-39 135.2 0.1 1.0 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 CTQ27379.1 - 3.5e-05 24.4 0.0 4.8e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 CoA binding domain Cadherin_4 PF17803.1 CTQ27383.1 - 0.0012 19.5 11.4 0.0012 19.5 11.4 7.6 2 2 0 3 3 3 1 Bacterial cadherin-like domain Presenilin PF01080.17 CTQ27383.1 - 2.4 6.9 10.8 4.1 6.1 10.8 1.3 1 0 0 1 1 1 0 Presenilin SLC12 PF03522.15 CTQ27383.1 - 4.7 6.1 6.6 6.5 5.7 6.6 1.1 1 0 0 1 1 1 0 Solute carrier family 12 OEP PF02321.18 CTQ27385.1 - 1.3e-43 149.0 36.9 1.8e-28 99.7 10.1 2.1 2 0 0 2 2 2 2 Outer membrane efflux protein ComP_DUS PF16732.5 CTQ27385.1 - 0.0089 16.9 3.6 0.036 15.0 0.0 3.1 3 1 0 3 3 3 1 Type IV minor pilin ComP, DNA uptake sequence receptor ABC_tran PF00005.27 CTQ27386.1 - 8e-28 97.7 0.1 1.9e-27 96.4 0.1 1.7 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 CTQ27386.1 - 4.9e-26 92.0 8.7 7.3e-26 91.4 8.7 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_21 PF13304.6 CTQ27386.1 - 0.00061 19.7 0.4 0.08 12.7 0.0 2.3 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ27386.1 - 0.00082 18.9 0.0 0.039 13.4 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ27386.1 - 0.003 17.3 0.1 0.007 16.1 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 CTQ27386.1 - 0.0059 16.7 0.2 0.023 14.8 0.1 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 CTQ27386.1 - 0.0061 16.6 0.0 0.21 11.6 0.1 2.3 2 0 0 2 2 2 1 Dynamin family RsgA_GTPase PF03193.16 CTQ27386.1 - 0.027 14.4 0.0 0.065 13.1 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Peptidase_C39 PF03412.15 CTQ27386.1 - 0.037 13.8 0.1 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Peptidase C39 family Colicin_V PF02674.16 CTQ27386.1 - 0.15 12.0 4.1 0.072 13.1 0.4 2.3 1 1 1 2 2 2 0 Colicin V production protein HlyD_3 PF13437.6 CTQ27387.1 - 2.9e-21 76.2 0.5 6.9e-17 62.1 0.1 2.6 2 0 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 CTQ27387.1 - 4.2e-11 42.5 0.8 2.8e-09 36.5 0.8 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 CTQ27387.1 - 2.7e-08 33.5 1.9 4.4e-07 29.6 0.1 2.8 2 0 0 2 2 2 1 Biotin-lipoyl like HlyD PF00529.20 CTQ27387.1 - 7.9e-07 28.9 0.0 1.1e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 CTQ27387.1 - 0.017 15.0 0.3 3.7 7.5 0.0 2.6 2 0 0 2 2 2 0 Biotin-requiring enzyme Peptidase_M23 PF01551.22 CTQ27387.1 - 0.065 13.4 0.1 0.42 10.9 0.0 2.3 2 0 0 2 2 2 0 Peptidase family M23 RnfC_N PF13375.6 CTQ27387.1 - 0.098 12.6 0.1 20 5.2 0.0 3.0 3 0 0 3 3 3 0 RnfC Barrel sandwich hybrid domain fn3_6 PF17766.1 CTQ27387.1 - 0.1 12.8 0.0 2 8.7 0.0 2.6 2 0 0 2 2 2 0 Fibronectin type-III domain OEP PF02321.18 CTQ27387.1 - 0.39 10.5 8.0 0.8 9.5 8.0 1.5 1 0 0 1 1 1 0 Outer membrane efflux protein Glycos_transf_1 PF00534.20 CTQ27388.1 - 1e-26 93.5 0.0 1.9e-26 92.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 CTQ27388.1 - 3.8e-22 79.2 0.0 8.5e-22 78.0 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 CTQ27388.1 - 0.0014 19.0 0.0 0.0062 16.9 0.0 2.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 CTQ27388.1 - 0.0064 16.5 0.0 0.021 14.8 0.0 1.9 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 CTQ27388.1 - 0.029 14.8 0.0 0.16 12.4 0.0 2.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain YokU PF14122.6 CTQ27388.1 - 0.17 11.9 0.1 0.45 10.5 0.1 1.7 1 0 0 1 1 1 0 YokU-like protein, putative antitoxin DUF1778 PF08681.11 CTQ27389.1 - 0.076 13.0 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1778) YccV-like PF08755.11 CTQ27390.1 - 1.9e-20 73.2 0.0 2.1e-20 73.0 0.0 1.0 1 0 0 1 1 1 1 Hemimethylated DNA-binding protein YccV like Methyltrans_SAM PF10672.9 CTQ27391.1 - 1.5e-29 103.1 0.0 2e-29 102.7 0.0 1.2 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase PUA_3 PF17785.1 CTQ27391.1 - 9.6e-20 70.2 0.1 1.8e-19 69.3 0.1 1.5 1 0 0 1 1 1 1 PUA-like domain Cons_hypoth95 PF03602.15 CTQ27391.1 - 1.7e-11 44.1 0.0 2.7e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 CTQ27391.1 - 1.1e-10 41.5 0.1 1.9e-10 40.7 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ27391.1 - 9.5e-07 28.5 0.0 1.5e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 CTQ27391.1 - 5.1e-06 27.1 0.0 1.1e-05 26.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PUA PF01472.20 CTQ27391.1 - 1e-05 25.4 0.0 2.1e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 PUA domain Methyltransf_15 PF09445.10 CTQ27391.1 - 1e-05 25.2 0.0 1.5e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.12 CTQ27391.1 - 0.00032 21.3 0.0 0.001 19.7 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 CTQ27391.1 - 0.0023 17.4 0.0 0.0033 16.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TRM PF02005.16 CTQ27391.1 - 0.008 15.4 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_12 PF08242.12 CTQ27391.1 - 0.027 15.2 0.1 0.081 13.7 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_10 PF05971.12 CTQ27391.1 - 0.15 11.3 0.0 0.22 10.8 0.0 1.1 1 0 0 1 1 1 0 RNA methyltransferase Methyltr_RsmB-F PF01189.17 CTQ27391.1 - 0.16 11.6 0.1 0.87 9.2 0.1 1.9 1 1 0 1 1 1 0 16S rRNA methyltransferase RsmB/F PBP PF01161.20 CTQ27392.1 - 1e-36 126.1 0.0 1.3e-36 125.8 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Peptidase_S3 PF00944.19 CTQ27392.1 - 0.16 11.8 0.1 0.26 11.1 0.1 1.3 1 0 0 1 1 1 0 Alphavirus core protein HTH_18 PF12833.7 CTQ27393.1 - 6.9e-16 58.3 2.8 8.7e-16 58.0 0.8 2.2 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ27393.1 - 2.9e-09 36.8 0.2 0.00027 21.0 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_23 PF13384.6 CTQ27393.1 - 0.00061 19.5 0.5 0.0024 17.6 0.1 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_8 PF02954.19 CTQ27393.1 - 0.0024 17.6 0.1 0.0065 16.2 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family AraC_N PF06719.13 CTQ27393.1 - 0.019 14.6 0.0 0.03 14.0 0.0 1.5 1 1 0 1 1 1 0 AraC-type transcriptional regulator N-terminus HTH_Tnp_ISL3 PF13542.6 CTQ27393.1 - 0.042 13.3 4.2 0.17 11.3 0.1 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 Acylphosphatase PF00708.18 CTQ27394.1 - 2.2e-24 85.7 0.0 2.4e-24 85.5 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase DsrC PF04358.13 CTQ27395.1 - 5.4e-46 155.5 0.0 6e-46 155.4 0.0 1.0 1 0 0 1 1 1 1 DsrC like protein Staph_opine_DH PF10100.9 CTQ27395.1 - 0.15 10.6 0.0 0.15 10.6 0.0 1.2 1 0 0 1 1 1 0 Staphylopine dehydrogenase Bax1-I PF01027.20 CTQ27396.1 - 3.6e-42 144.6 31.5 4.1e-42 144.4 31.5 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF2583 PF10762.9 CTQ27396.1 - 0.059 13.8 1.7 0.2 12.1 1.7 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2583) SBP_bac_5 PF00496.22 CTQ27397.1 - 4.6e-89 299.0 8.2 6e-89 298.6 8.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle EAL PF00563.20 CTQ27398.1 - 5.7e-56 189.7 0.0 7.6e-56 189.3 0.0 1.2 1 0 0 1 1 1 1 EAL domain Fer2 PF00111.27 CTQ27400.1 - 1.4e-12 47.4 3.8 2.5e-12 46.5 3.8 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 CTQ27400.1 - 7.1e-06 26.3 0.0 2e-05 24.8 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 CTQ27400.1 - 1.8e-05 24.9 0.2 0.0043 17.2 0.0 2.9 2 1 0 3 3 3 1 Ferric reductase NAD binding domain NAD_binding_1 PF00175.21 CTQ27400.1 - 6.2e-05 23.6 0.1 0.03 15.0 0.0 2.7 2 1 0 2 2 2 1 Oxidoreductase NAD-binding domain Fer2_3 PF13085.6 CTQ27400.1 - 0.042 13.9 0.8 0.096 12.7 0.8 1.6 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Aldedh PF00171.22 CTQ27401.1 - 1e-171 571.6 0.7 1.1e-171 571.4 0.7 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family PqiA PF04403.13 CTQ27401.1 - 0.15 11.9 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Paraquat-inducible protein A Ring_hydroxyl_A PF00848.19 CTQ27402.1 - 1.3e-22 80.8 1.0 2.1e-21 76.9 1.0 2.1 1 1 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) Rieske PF00355.26 CTQ27402.1 - 1.6e-20 72.8 0.1 2.7e-20 72.1 0.1 1.3 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 CTQ27402.1 - 0.03 14.2 0.0 0.055 13.4 0.0 1.4 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain BCCT PF02028.17 CTQ27403.1 - 1.9e-114 382.8 41.0 2.2e-114 382.6 41.0 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DUF1980 PF09323.10 CTQ27403.1 - 0.1 12.5 0.4 0.82 9.6 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) Myotoxins PF00819.17 CTQ27404.1 - 0.032 14.5 3.2 0.057 13.7 3.2 1.4 1 1 0 1 1 1 0 Myotoxin, crotamine Iso_dh PF00180.20 CTQ27405.1 - 6e-87 292.0 0.0 7.3e-87 291.7 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase LysR_substrate PF03466.20 CTQ27406.1 - 4.4e-38 130.8 3.1 5.9e-38 130.3 3.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27406.1 - 5.6e-17 61.4 1.0 1e-16 60.6 1.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ27406.1 - 0.036 14.0 0.2 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 MarR family HTH_AsnC-type PF13404.6 CTQ27406.1 - 0.051 13.4 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain DAO PF01266.24 CTQ27407.1 - 9.5e-57 193.2 0.2 1.1e-56 193.0 0.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 CTQ27407.1 - 3.1e-05 23.3 0.2 5.1e-05 22.6 0.2 1.4 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 CTQ27407.1 - 6.8e-05 22.3 0.8 0.00011 21.5 0.8 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 CTQ27407.1 - 8.8e-05 21.9 0.1 0.00017 21.0 0.1 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ27407.1 - 0.00019 20.8 1.1 0.067 12.4 0.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ27407.1 - 0.00028 21.0 2.4 0.0011 19.1 2.3 2.1 1 1 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 CTQ27407.1 - 0.00052 19.2 2.1 0.001 18.2 2.1 1.4 1 0 0 1 1 1 1 FAD binding domain Amino_oxidase PF01593.24 CTQ27407.1 - 0.00064 19.1 0.2 0.36 10.1 0.1 2.2 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase Pyr_redox PF00070.27 CTQ27407.1 - 0.0019 18.7 0.2 0.0042 17.6 0.2 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 CTQ27407.1 - 0.0023 17.3 0.0 0.0031 16.9 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 CTQ27407.1 - 0.0033 16.6 0.3 0.0061 15.7 0.3 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 CTQ27407.1 - 0.0071 15.1 0.5 0.042 12.5 0.2 2.0 2 0 0 2 2 2 1 HI0933-like protein UDPG_MGDP_dh_N PF03721.14 CTQ27407.1 - 0.0074 15.9 1.2 0.012 15.2 1.2 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Lycopene_cycl PF05834.12 CTQ27407.1 - 0.042 12.9 2.2 0.23 10.4 0.4 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 CTQ27407.1 - 0.044 13.1 0.1 0.077 12.3 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 CTQ27407.1 - 0.069 13.6 0.0 0.16 12.4 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding ApbA PF02558.16 CTQ27407.1 - 0.091 12.4 0.2 15 5.2 0.0 2.2 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Aldedh PF00171.22 CTQ27408.1 - 6e-172 572.3 0.0 6.8e-172 572.1 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family MMS19_N PF14500.6 CTQ27408.1 - 0.0078 15.8 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Dos2-interacting transcription regulator of RNA-Pol-II LuxC PF05893.14 CTQ27408.1 - 0.12 11.5 0.0 0.23 10.5 0.0 1.4 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) Endotoxin_C2 PF18449.1 CTQ27408.1 - 0.26 11.6 2.2 0.45 10.9 2.2 1.4 1 0 0 1 1 1 0 Delta endotoxin Cupin_2 PF07883.11 CTQ27409.1 - 7.3e-17 60.8 0.1 1.1e-16 60.2 0.1 1.3 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.22 CTQ27409.1 - 2.1e-14 53.3 0.4 3.2e-14 52.7 0.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ27409.1 - 2.6e-10 40.5 0.1 4.4e-10 39.8 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 CTQ27409.1 - 1.1e-08 34.9 0.0 1.8e-08 34.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 CTQ27409.1 - 9.7e-05 22.5 0.0 0.00016 21.7 0.0 1.3 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA AraC_binding PF02311.19 CTQ27409.1 - 0.00018 21.4 0.2 0.00033 20.6 0.2 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_37 PF13744.6 CTQ27409.1 - 0.00025 20.9 0.3 0.00091 19.1 0.3 1.9 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.6 CTQ27409.1 - 0.0056 17.1 0.0 0.012 16.1 0.0 1.5 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 CTQ27409.1 - 0.016 15.1 0.1 0.024 14.5 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Histone_HNS PF00816.21 CTQ27409.1 - 0.11 13.4 0.0 0.15 12.9 0.0 1.3 1 0 0 1 1 1 0 H-NS histone family Cupin_3 PF05899.12 CTQ27409.1 - 0.14 11.9 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Peptidase_C26 PF07722.13 CTQ27410.1 - 2.1e-70 236.8 0.0 2.4e-70 236.6 0.0 1.0 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 CTQ27410.1 - 5.4e-14 52.4 0.0 1.1e-13 51.5 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Gln-synt_C PF00120.24 CTQ27411.1 - 4.4e-100 335.0 0.0 5.4e-100 334.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N_2 PF16952.5 CTQ27411.1 - 0.00045 20.0 0.0 0.0012 18.7 0.0 1.8 2 0 0 2 2 2 1 Glutamine synthetase N-terminal domain AA_permease PF00324.21 CTQ27412.1 - 2e-41 142.1 35.1 2.5e-41 141.8 35.1 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ27412.1 - 2.4e-31 109.0 38.9 2.9e-31 108.7 38.9 1.1 1 0 0 1 1 1 1 Amino acid permease LapA_dom PF06305.11 CTQ27413.1 - 0.028 14.2 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF2981 PF11200.8 CTQ27413.1 - 0.18 11.5 0.3 0.17 11.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) adh_short PF00106.25 CTQ27415.1 - 2.2e-41 141.5 0.0 2.8e-41 141.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ27415.1 - 9.9e-30 103.8 0.6 1.2e-29 103.5 0.6 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ27415.1 - 4.9e-09 36.4 0.8 6.5e-09 35.9 0.8 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ27415.1 - 0.0029 17.1 0.1 0.0052 16.3 0.1 1.5 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 CTQ27415.1 - 0.027 14.4 0.2 0.043 13.7 0.2 1.4 1 0 0 1 1 1 0 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 CTQ27415.1 - 0.11 11.8 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase HxlR PF01638.17 CTQ27416.1 - 1.2e-20 73.1 0.0 2e-20 72.4 0.0 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 CTQ27416.1 - 0.063 13.3 0.0 0.095 12.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix His_Phos_2 PF00328.22 CTQ27417.1 - 2.4e-15 56.8 0.0 1.3e-14 54.4 0.0 1.9 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) YccJ PF13993.6 CTQ27418.1 - 1.3e-39 134.3 1.9 1.5e-39 134.2 1.9 1.0 1 0 0 1 1 1 1 YccJ-like protein FMN_red PF03358.15 CTQ27419.1 - 9.5e-13 48.2 0.1 1.3e-12 47.7 0.1 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_1 PF00258.25 CTQ27419.1 - 1.4e-06 28.6 0.1 5.7e-06 26.6 0.1 1.8 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.7 CTQ27419.1 - 5.5e-06 26.7 0.0 0.00019 21.7 0.0 2.1 1 1 1 2 2 2 1 Flavodoxin domain Flavodoxin_2 PF02525.17 CTQ27419.1 - 4.2e-05 23.3 0.0 5.5e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold EamA PF00892.20 CTQ27421.1 - 1.5e-27 96.4 36.3 2.6e-14 53.6 18.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 CTQ27421.1 - 0.00086 18.7 0.4 0.00086 18.7 0.4 1.5 2 0 0 2 2 2 1 Triose-phosphate Transporter family DUF2070 PF09843.9 CTQ27421.1 - 9.9 4.3 17.1 0.026 12.8 6.2 1.8 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) Xan_ur_permease PF00860.20 CTQ27422.1 - 6e-100 334.7 48.4 6e-100 334.7 48.4 1.3 1 1 0 1 1 1 1 Permease family Flavin_Reduct PF01613.18 CTQ27423.1 - 3e-31 108.6 0.2 3.3e-31 108.4 0.2 1.0 1 0 0 1 1 1 1 Flavin reductase like domain SHP PF03579.13 CTQ27423.1 - 0.073 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Small hydrophobic protein Nitroreductase PF00881.24 CTQ27424.1 - 3.8e-15 56.4 0.0 4.5e-15 56.1 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family Abhydrolase_1 PF00561.20 CTQ27425.1 - 1.9e-20 73.6 0.3 5.6e-18 65.5 0.3 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CTQ27425.1 - 5e-10 39.1 0.1 9.1e-10 38.2 0.1 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 CTQ27425.1 - 1.8e-09 38.5 7.4 2.3e-09 38.2 7.4 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 CTQ27425.1 - 0.0028 16.4 0.0 0.0047 15.7 0.0 1.4 1 1 0 1 1 1 1 Ndr family Thioesterase PF00975.20 CTQ27425.1 - 0.019 15.1 0.6 0.082 13.0 0.6 1.8 1 1 0 1 1 1 0 Thioesterase domain Esterase PF00756.20 CTQ27425.1 - 0.08 12.6 0.1 0.1 12.2 0.1 1.3 1 0 0 1 1 1 0 Putative esterase SpoIISB_antitox PF14185.6 CTQ27425.1 - 0.19 11.6 0.0 0.4 10.6 0.0 1.4 1 0 0 1 1 1 0 Antitoxin SpoIISB, type II toxin-antitoxin system Ribonuc_L-PSP PF01042.21 CTQ27426.1 - 1.3e-31 109.2 0.0 1.5e-31 108.9 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Isochorismatase PF00857.20 CTQ27427.1 - 2.1e-41 142.0 0.0 2.8e-41 141.6 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family Bac_luciferase PF00296.20 CTQ27428.1 - 1.1e-69 235.3 0.5 1.3e-69 235.1 0.5 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Copine PF07002.16 CTQ27428.1 - 0.076 12.5 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 Copine TetR_C_3 PF08362.11 CTQ27429.1 - 5.9e-59 198.1 0.1 7.8e-59 197.7 0.1 1.2 1 0 0 1 1 1 1 YcdC-like protein, C-terminal region TetR_N PF00440.23 CTQ27429.1 - 1.1e-14 53.9 0.4 1.7e-14 53.3 0.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_29 PF17938.1 CTQ27429.1 - 0.0003 20.9 0.0 0.00053 20.1 0.0 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain LprI PF07007.12 CTQ27430.1 - 3.2e-20 72.7 9.3 3.9e-20 72.4 9.3 1.1 1 0 0 1 1 1 1 Lysozyme inhibitor LprI PepSY_2 PF13670.6 CTQ27430.1 - 0.14 12.2 4.7 0.16 12.0 3.4 1.8 2 1 0 2 2 2 0 Peptidase propeptide and YPEB domain TrbI PF03743.14 CTQ27430.1 - 0.37 10.6 1.8 0.56 10.0 1.8 1.2 1 0 0 1 1 1 0 Bacterial conjugation TrbI-like protein Aldedh PF00171.22 CTQ27431.1 - 1.4e-112 376.6 0.1 3e-112 375.5 0.1 1.5 2 0 0 2 2 2 1 Aldehyde dehydrogenase family Pro_dh PF01619.18 CTQ27431.1 - 8.3e-101 337.4 0.0 1.6e-100 336.4 0.0 1.5 1 0 0 1 1 1 1 Proline dehydrogenase Pro_dh-DNA_bdg PF14850.6 CTQ27431.1 - 1.2e-46 157.8 0.0 3.2e-46 156.5 0.0 1.8 1 0 0 1 1 1 1 DNA-binding domain of Proline dehydrogenase PRODH PF18327.1 CTQ27431.1 - 8.2e-19 67.6 2.7 8.2e-19 67.6 2.7 4.4 6 0 0 6 6 6 1 Proline utilization A proline dehydrogenase N-terminal domain SSF PF00474.17 CTQ27432.1 - 1.4e-144 482.0 30.2 1.4e-144 482.0 30.2 1.4 2 0 0 2 2 2 1 Sodium:solute symporter family 4HB_MCP_1 PF12729.7 CTQ27432.1 - 0.56 9.7 4.1 0.16 11.5 0.2 2.1 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction DUF3574 PF12098.8 CTQ27434.1 - 1.9e-40 136.8 0.1 2.3e-40 136.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3574) Nucleos_tra2_C PF07662.13 CTQ27435.1 - 2.5e-59 200.6 15.1 2.5e-59 200.6 15.1 2.1 2 1 0 2 2 2 1 Na+ dependent nucleoside transporter C-terminus Nucleos_tra2_N PF01773.20 CTQ27435.1 - 4.7e-18 65.6 7.2 4.7e-18 65.6 7.2 3.8 2 1 1 3 3 3 1 Na+ dependent nucleoside transporter N-terminus Gate PF07670.14 CTQ27435.1 - 2.5e-05 24.5 8.2 2.5e-05 24.5 8.2 3.8 2 1 2 4 4 4 1 Nucleoside recognition FTR1 PF03239.14 CTQ27436.1 - 7e-73 245.5 13.3 8.3e-73 245.2 13.3 1.0 1 0 0 1 1 1 1 Iron permease FTR1 family MFS_1 PF07690.16 CTQ27436.1 - 2.8e-05 23.2 20.2 2.8e-05 23.2 20.2 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily Abhydrolase_9_N PF15420.6 CTQ27436.1 - 0.02 14.9 9.7 0.014 15.4 8.0 1.7 1 1 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus Flp_Fap PF04964.14 CTQ27436.1 - 0.058 13.2 0.6 0.99 9.3 0.2 2.8 2 0 0 2 2 2 0 Flp/Fap pilin component IDEAL PF08858.10 CTQ27436.1 - 0.093 12.5 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 IDEAL domain HemY_N PF07219.13 CTQ27436.1 - 0.83 9.9 6.7 9.9 6.4 1.1 3.0 2 1 0 2 2 2 0 HemY protein N-terminus DUF4131 PF13567.6 CTQ27436.1 - 2.1 8.0 14.0 0.3 10.7 0.2 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4131) Peptidase_M75 PF09375.10 CTQ27437.1 - 2.9e-44 151.7 2.4 4e-44 151.2 2.4 1.1 1 0 0 1 1 1 1 Imelysin Cupredoxin_1 PF13473.6 CTQ27437.1 - 9e-25 86.8 0.1 1.6e-24 86.0 0.1 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain Dyp_perox PF04261.12 CTQ27438.1 - 8.1e-118 393.1 0.0 9.5e-118 392.9 0.0 1.0 1 0 0 1 1 1 1 Dyp-type peroxidase family TAT_signal PF10518.9 CTQ27438.1 - 0.00025 20.7 0.4 0.00044 20.0 0.4 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence PhoH PF02562.16 CTQ27439.1 - 3.3e-77 258.6 0.0 4.6e-77 258.1 0.0 1.2 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.6 CTQ27439.1 - 1.3e-08 34.8 0.0 2.9e-08 33.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ27439.1 - 3.5e-05 24.1 0.1 0.00032 21.0 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 CTQ27439.1 - 7.5e-05 23.1 0.0 0.033 14.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 CTQ27439.1 - 0.011 15.4 0.0 0.023 14.4 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein DEAD PF00270.29 CTQ27439.1 - 0.028 14.2 0.1 1.7 8.4 0.0 2.7 3 0 0 3 3 3 0 DEAD/DEAH box helicase ResIII PF04851.15 CTQ27439.1 - 0.073 13.1 0.0 0.22 11.5 0.0 1.8 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit DUF2075 PF09848.9 CTQ27439.1 - 0.15 11.3 1.4 1.2 8.3 0.1 2.6 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2075) DSBA PF01323.20 CTQ27440.1 - 1.8e-18 67.0 1.7 3.6e-17 62.8 1.7 2.0 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin PF00085.20 CTQ27440.1 - 4.7e-05 23.3 0.0 0.0089 16.0 0.0 2.3 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_4 PF13462.6 CTQ27440.1 - 5.2e-05 23.5 0.1 9e-05 22.7 0.1 1.3 1 1 0 1 1 1 1 Thioredoxin QSOX_Trx1 PF18108.1 CTQ27440.1 - 0.0022 18.2 0.1 0.72 10.1 0.0 2.3 1 1 1 2 2 2 2 QSOX Trx-like domain Thioredoxin_2 PF13098.6 CTQ27440.1 - 0.049 14.1 0.0 0.17 12.4 0.0 1.8 1 1 0 1 1 1 0 Thioredoxin-like domain Pox_T4_N PF04491.12 CTQ27442.1 - 0.55 10.1 2.0 28 4.7 0.0 3.0 2 1 2 4 4 4 0 Poxvirus T4 protein, N terminus Isochorismatase PF00857.20 CTQ27443.1 - 1.2e-22 80.9 0.0 2.1e-22 80.1 0.0 1.4 1 0 0 1 1 1 1 Isochorismatase family Pirin PF02678.16 CTQ27444.1 - 2.4e-35 120.8 0.3 5.7e-35 119.6 0.2 1.7 2 0 0 2 2 2 1 Pirin Pirin_C PF05726.13 CTQ27444.1 - 3e-30 104.6 0.1 1.1e-29 102.8 0.0 1.8 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Pirin_C_2 PF17954.1 CTQ27444.1 - 0.0026 17.9 0.0 0.0075 16.4 0.0 1.7 2 0 0 2 2 2 1 Quercetinase C-terminal cupin domain LysR_substrate PF03466.20 CTQ27445.1 - 1.3e-40 139.0 7.7 1.7e-40 138.6 7.7 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27445.1 - 1.5e-16 60.1 0.2 3.8e-16 58.8 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family 2-Hacid_dh_C PF02826.19 CTQ27447.1 - 7.5e-43 146.0 0.0 9.5e-43 145.6 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 CTQ27447.1 - 8.2e-06 26.1 0.0 1.3e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 CTQ27447.1 - 0.1 12.6 0.0 0.18 11.8 0.0 1.4 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PHP PF02811.19 CTQ27448.1 - 6.2e-08 33.1 0.1 2e-07 31.4 0.1 1.8 1 1 0 1 1 1 1 PHP domain Nitrate_red_del PF02613.15 CTQ27449.1 - 1.3e-12 47.9 0.3 1.8e-12 47.4 0.3 1.2 1 0 0 1 1 1 1 Nitrate reductase delta subunit DUF1097 PF06496.11 CTQ27450.1 - 4.4e-39 133.9 24.3 5.1e-39 133.7 24.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1097) Macro PF01661.21 CTQ27451.1 - 9.5e-43 145.0 0.2 1.2e-42 144.7 0.2 1.1 1 0 0 1 1 1 1 Macro domain TetR_N PF00440.23 CTQ27452.1 - 3.7e-15 55.5 0.7 7.9e-15 54.4 0.7 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 CTQ27452.1 - 0.00021 21.5 0.9 0.00043 20.5 0.9 1.5 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal HTH_23 PF13384.6 CTQ27452.1 - 0.00025 20.7 0.1 0.00049 19.8 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain TetR_C_31 PF17940.1 CTQ27452.1 - 0.00037 20.7 1.6 0.00037 20.7 1.6 1.9 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain HTH_7 PF02796.15 CTQ27452.1 - 0.0026 17.8 0.0 0.0071 16.4 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_Tnp_ISL3 PF13542.6 CTQ27452.1 - 0.012 15.1 0.0 0.024 14.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_28 PF13518.6 CTQ27452.1 - 0.014 15.6 0.2 0.041 14.0 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain CENP-B_N PF04218.13 CTQ27452.1 - 0.017 14.7 0.0 0.043 13.4 0.0 1.7 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain HTH_AraC PF00165.23 CTQ27452.1 - 0.023 14.8 0.0 0.046 13.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family Acyl_transf_3 PF01757.22 CTQ27453.1 - 2e-31 109.3 50.0 3.2e-31 108.6 50.0 1.3 1 1 0 1 1 1 1 Acyltransferase family Phage_Coat_Gp8 PF05371.12 CTQ27453.1 - 0.0017 18.1 0.1 0.0046 16.7 0.1 1.7 1 0 0 1 1 1 1 Phage major coat protein, Gp8 MdoG PF04349.12 CTQ27455.1 - 9.5e-198 657.9 0.1 1.1e-197 657.8 0.1 1.0 1 0 0 1 1 1 1 Periplasmic glucan biosynthesis protein, MdoG Glycos_transf_2 PF00535.26 CTQ27456.1 - 4.2e-23 82.0 0.0 7.1e-23 81.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 CTQ27456.1 - 1.1e-12 48.2 4.6 1.1e-12 48.2 4.6 3.2 3 1 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 CTQ27456.1 - 2.2e-08 33.7 0.0 5.9e-08 32.4 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family 21 DUF1375 PF07119.12 CTQ27457.1 - 5.6e-08 33.1 8.0 3.3e-06 27.4 8.0 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1375) LPAM_2 PF13627.6 CTQ27457.1 - 0.055 13.3 1.2 0.12 12.3 1.2 1.6 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site MLTD_N PF06474.12 CTQ27457.1 - 0.16 12.1 0.7 0.29 11.3 0.7 1.4 1 0 0 1 1 1 0 MltD lipid attachment motif MsyB PF13984.6 CTQ27458.1 - 1.6e-61 206.0 13.8 1.9e-61 205.8 13.8 1.0 1 0 0 1 1 1 1 MsyB protein MFS_1 PF07690.16 CTQ27459.1 - 1.9e-53 181.7 47.8 2.3e-34 118.9 34.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ27459.1 - 5.2e-12 45.4 31.7 7.4e-06 25.1 7.6 3.1 1 1 1 3 3 3 3 Sugar (and other) transporter MFS_1_like PF12832.7 CTQ27459.1 - 5.7e-12 45.2 15.8 1.1e-10 41.0 15.8 2.2 1 1 0 1 1 1 1 MFS_1 like family MFS_3 PF05977.13 CTQ27459.1 - 0.00023 19.7 22.4 0.00028 19.4 22.4 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector Lip_A_acyltrans PF03279.13 CTQ27460.1 - 2.6e-117 391.2 0.0 2.9e-117 391.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase UPF0176_N PF17773.1 CTQ27461.1 - 2.7e-20 72.5 0.0 4.4e-20 71.8 0.0 1.4 1 0 0 1 1 1 1 UPF0176 acylphosphatase like domain Rhodanese_C PF12368.8 CTQ27461.1 - 1.8e-19 69.9 12.9 3e-19 69.1 12.9 1.4 1 0 0 1 1 1 1 Rhodanase C-terminal Rhodanese PF00581.20 CTQ27461.1 - 8.3e-14 52.0 0.1 1.7e-13 51.0 0.1 1.5 1 0 0 1 1 1 1 Rhodanese-like domain DAO PF01266.24 CTQ27462.1 - 1.4e-45 156.5 0.4 1.5e-45 156.3 0.4 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 CTQ27462.1 - 0.00057 19.2 0.0 0.58 9.4 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ27462.1 - 0.0096 16.1 0.1 0.027 14.7 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 CTQ27462.1 - 0.011 15.0 0.0 0.016 14.5 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ27462.1 - 0.011 14.5 0.0 3 6.5 0.0 2.1 2 0 0 2 2 2 0 HI0933-like protein FAD_oxidored PF12831.7 CTQ27462.1 - 0.011 15.1 0.2 0.019 14.3 0.2 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 CTQ27462.1 - 0.022 13.9 0.0 0.038 13.1 0.0 1.4 1 0 0 1 1 1 0 FAD binding domain Thi4 PF01946.17 CTQ27462.1 - 0.072 12.3 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Thi4 family GIDA PF01134.22 CTQ27462.1 - 0.098 11.7 0.1 0.14 11.2 0.1 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A FAD_binding_3 PF01494.19 CTQ27462.1 - 0.13 11.5 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain 2-Hacid_dh_C PF02826.19 CTQ27462.1 - 0.22 10.9 0.0 0.45 9.9 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 CTQ27462.1 - 0.24 11.2 0.0 0.36 10.7 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BssS PF13991.6 CTQ27463.1 - 6.6e-34 115.8 0.0 7.5e-34 115.6 0.0 1.0 1 0 0 1 1 1 1 BssS protein family Cu2_monooxygen PF01082.20 CTQ27463.1 - 0.036 14.3 0.0 0.048 13.9 0.0 1.2 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain DinI PF06183.13 CTQ27464.1 - 4.7e-29 100.5 0.1 5.8e-29 100.2 0.1 1.1 1 0 0 1 1 1 1 DinI-like family Amidohydro_1 PF01979.20 CTQ27465.1 - 2.1e-22 79.9 0.0 2.9e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_2 PF04909.14 CTQ27465.1 - 0.0039 17.0 0.1 0.0063 16.3 0.1 1.5 1 1 0 1 1 1 1 Amidohydrolase DUF1439 PF07273.12 CTQ27466.1 - 9.8e-54 181.3 0.3 1.1e-53 181.1 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1439) B56 PF01603.20 CTQ27466.1 - 0.025 13.6 0.0 0.037 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein phosphatase 2A regulatory B subunit (B56 family) DUF2993 PF11209.8 CTQ27466.1 - 0.038 14.2 0.1 0.05 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2993) LPAM_1 PF08139.12 CTQ27466.1 - 4 8.1 4.6 29 5.4 4.6 2.3 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site MFS_1 PF07690.16 CTQ27467.1 - 1.5e-31 109.6 49.6 2.2e-21 76.2 26.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ27467.1 - 0.0055 15.6 6.4 0.0055 15.6 6.4 2.3 2 1 0 2 2 2 1 MFS_1 like family Acetyltransf_3 PF13302.7 CTQ27468.1 - 8.2e-19 68.7 0.1 1e-18 68.4 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ27468.1 - 4.4e-09 36.7 0.0 5.6e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ27468.1 - 1.7e-08 34.7 0.0 2.3e-08 34.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 CTQ27468.1 - 2.2e-05 24.2 0.0 3.2e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ27468.1 - 0.14 12.2 0.0 0.26 11.3 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein DUF480 PF04337.12 CTQ27469.1 - 4.6e-63 211.8 0.4 9.6e-63 210.7 0.2 1.6 2 0 0 2 2 2 1 Protein of unknown function, DUF480 DUF1843 PF08898.10 CTQ27469.1 - 0.051 14.1 0.1 0.12 12.9 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1843) Lzipper-MIP1 PF14389.6 CTQ27469.1 - 0.1 12.9 0.3 0.52 10.6 0.0 2.2 2 1 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 BST2 PF16716.5 CTQ27469.1 - 0.12 13.0 0.2 16 6.2 0.0 2.4 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 GFO_IDH_MocA PF01408.22 CTQ27470.1 - 1.5e-25 90.3 0.0 2.3e-25 89.7 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 CTQ27470.1 - 0.025 13.9 0.0 0.055 12.8 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MurJ PF03023.14 CTQ27471.1 - 1.2e-158 528.5 33.7 1.5e-158 528.1 33.7 1.1 1 0 0 1 1 1 1 Lipid II flippase MurJ Polysacc_synt_C PF14667.6 CTQ27471.1 - 3.8e-10 40.0 20.9 3.8e-10 40.0 20.9 3.9 4 1 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain AWPM-19 PF05512.11 CTQ27471.1 - 0.31 11.2 11.3 0.048 13.8 1.6 3.4 3 0 0 3 3 3 0 AWPM-19-like family MFS_1 PF07690.16 CTQ27472.1 - 2.3e-29 102.5 55.5 1.5e-25 89.9 42.7 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ27472.1 - 0.00077 18.9 45.3 0.0021 17.4 44.7 2.0 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB TetR_C_16 PF17920.1 CTQ27472.1 - 1.4 9.2 8.6 0.21 11.8 1.6 2.9 1 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain LysR_substrate PF03466.20 CTQ27473.1 - 4.1e-37 127.6 4.7 5.5e-37 127.2 4.7 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27473.1 - 3.1e-17 62.3 0.4 5.8e-17 61.4 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ27473.1 - 0.0033 17.2 0.6 0.016 15.0 0.3 2.3 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain RNase_E_G PF10150.9 CTQ27474.1 - 1.9e-93 312.8 0.4 3.2e-93 312.0 0.0 1.6 2 0 0 2 2 2 1 Ribonuclease E/G family S1 PF00575.23 CTQ27474.1 - 1.5e-16 60.5 0.0 3.9e-16 59.1 0.0 1.8 1 0 0 1 1 1 1 S1 RNA binding domain PNPase_C PF12111.8 CTQ27474.1 - 6.7e-16 57.4 5.9 6.7e-16 57.4 5.9 2.7 2 0 0 2 2 2 1 Polyribonucleotide phosphorylase C terminal PseudoU_synth_2 PF00849.22 CTQ27475.1 - 2.6e-30 105.6 0.1 4.5e-30 104.9 0.1 1.4 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 CTQ27475.1 - 2.8e-11 43.0 0.4 5.2e-11 42.1 0.4 1.5 1 0 0 1 1 1 1 S4 domain RNaseH_pPIWI_RE PF13032.6 CTQ27475.1 - 0.08 12.8 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 RNaseH domain of pPIWI_RE TGS PF02824.21 CTQ27475.1 - 0.084 12.9 0.0 0.21 11.7 0.0 1.6 1 0 0 1 1 1 0 TGS domain Maf PF02545.14 CTQ27476.1 - 9.7e-49 165.4 0.0 1.1e-48 165.2 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein YceD PF02620.17 CTQ27477.1 - 8.2e-20 71.1 0.6 1.2e-19 70.6 0.6 1.3 1 0 0 1 1 1 1 Large ribosomal RNA subunit accumulation protein YceD DUF2688 PF10892.8 CTQ27477.1 - 0.019 14.5 0.2 0.04 13.4 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) Ribosomal_L32p PF01783.23 CTQ27478.1 - 2.9e-19 69.1 0.6 3.2e-19 68.9 0.6 1.0 1 0 0 1 1 1 1 Ribosomal L32p protein family FA_synthesis PF02504.15 CTQ27479.1 - 2.9e-126 420.9 0.0 3.3e-126 420.7 0.0 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein ACP_syn_III_C PF08541.10 CTQ27480.1 - 1.9e-36 124.1 0.4 5.8e-36 122.6 0.1 2.0 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 CTQ27480.1 - 3.8e-29 100.4 1.7 7.5e-29 99.4 1.7 1.5 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Chal_sti_synt_N PF00195.19 CTQ27480.1 - 4.7e-06 26.2 1.7 8.3e-06 25.4 1.7 1.4 1 0 0 1 1 1 1 Chalcone and stilbene synthases, N-terminal domain Thiolase_N PF00108.23 CTQ27480.1 - 7e-06 25.6 2.1 7e-06 25.6 2.1 1.7 2 1 1 3 3 3 1 Thiolase, N-terminal domain HMG_CoA_synt_N PF01154.17 CTQ27480.1 - 0.0022 17.9 0.3 0.0035 17.2 0.3 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ketoacyl-synt PF00109.26 CTQ27480.1 - 0.0027 17.3 11.6 0.012 15.2 6.1 2.9 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain FAE1_CUT1_RppA PF08392.12 CTQ27480.1 - 0.14 11.5 0.0 0.22 10.8 0.0 1.4 1 0 0 1 1 1 0 FAE1/Type III polyketide synthase-like protein Acyl_transf_1 PF00698.21 CTQ27481.1 - 2.8e-39 135.5 1.5 3.3e-39 135.2 1.5 1.0 1 0 0 1 1 1 1 Acyl transferase domain adh_short_C2 PF13561.6 CTQ27482.1 - 1e-68 231.4 6.8 1.2e-68 231.2 6.8 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27482.1 - 2.7e-61 206.4 4.0 3.2e-61 206.2 4.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ27482.1 - 5.8e-20 72.0 1.4 8.5e-20 71.4 1.4 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 CTQ27482.1 - 1.2e-06 28.5 2.0 1.6e-06 28.2 2.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 CTQ27482.1 - 5.3e-05 22.8 0.2 9.1e-05 22.0 0.2 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family ADH_zinc_N PF00107.26 CTQ27482.1 - 0.062 13.3 1.8 0.11 12.4 0.1 2.1 2 1 0 2 2 2 0 Zinc-binding dehydrogenase DUF1776 PF08643.10 CTQ27482.1 - 0.13 11.6 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) LDcluster4 PF18306.1 CTQ27482.1 - 1.1 8.8 8.1 5.2 6.6 0.7 2.3 2 0 0 2 2 2 0 SLOG cluster4 family PP-binding PF00550.25 CTQ27483.1 - 7.4e-17 61.5 0.2 8.3e-17 61.3 0.2 1.0 1 0 0 1 1 1 1 Phosphopantetheine attachment site PP-binding_2 PF14573.6 CTQ27483.1 - 2.6e-06 27.6 0.9 2.9e-06 27.4 0.9 1.2 1 1 0 1 1 1 1 Acyl-carrier DUF1896 PF08989.10 CTQ27483.1 - 0.028 14.5 0.0 0.032 14.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1896) DUF1493 PF07377.12 CTQ27483.1 - 0.029 14.9 0.4 0.032 14.7 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) Ribosomal_L50 PF10501.9 CTQ27483.1 - 0.033 14.3 0.0 0.044 13.9 0.0 1.4 1 1 0 1 1 1 0 Ribosomal subunit 39S HLH PF00010.26 CTQ27483.1 - 0.065 13.2 0.0 0.083 12.9 0.0 1.3 1 0 0 1 1 1 0 Helix-loop-helix DNA-binding domain ketoacyl-synt PF00109.26 CTQ27484.1 - 2.4e-63 214.1 1.7 2.4e-63 214.1 1.7 1.7 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 CTQ27484.1 - 3.6e-40 136.6 0.7 6.9e-40 135.7 0.7 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 CTQ27484.1 - 1.7e-05 24.3 2.2 2.4e-05 23.9 0.8 1.9 2 0 0 2 2 2 1 Thiolase, N-terminal domain ACP_syn_III PF08545.10 CTQ27484.1 - 0.00019 21.2 8.6 0.28 11.1 0.0 3.9 3 1 0 3 3 3 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAsynt_C_assoc PF16197.5 CTQ27484.1 - 0.073 13.5 0.1 0.3 11.6 0.1 2.1 2 0 0 2 2 2 0 Ketoacyl-synthetase C-terminal extension Aminotran_4 PF01063.19 CTQ27485.1 - 1.2e-47 162.6 0.0 1.4e-47 162.4 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV YceG PF02618.16 CTQ27486.1 - 4.8e-80 269.0 0.0 5.6e-80 268.8 0.0 1.0 1 0 0 1 1 1 1 YceG-like family Thymidylate_kin PF02223.17 CTQ27487.1 - 4.4e-57 192.8 0.0 5e-57 192.6 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_28 PF13521.6 CTQ27487.1 - 4.4e-06 27.0 0.1 6e-06 26.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 CTQ27487.1 - 0.00026 20.9 0.0 0.21 11.4 0.0 2.2 2 0 0 2 2 2 2 Deoxynucleoside kinase AAA_18 PF13238.6 CTQ27487.1 - 0.0017 18.9 0.1 0.011 16.2 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ27487.1 - 0.015 15.6 0.0 0.023 15.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 CTQ27487.1 - 0.039 14.4 0.1 0.36 11.2 0.1 2.2 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CTQ27487.1 - 0.056 13.6 0.8 0.72 10.0 0.8 2.4 1 1 0 1 1 1 0 AAA domain DNA_pol3_delta2 PF13177.6 CTQ27488.1 - 7e-42 143.0 0.0 1e-41 142.4 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit DNApol3-delta_C PF09115.10 CTQ27488.1 - 2.7e-37 127.8 6.2 5.6e-37 126.8 6.2 1.6 1 0 0 1 1 1 1 DNA polymerase III, delta subunit, C terminal EPF PF17181.4 CTQ27488.1 - 1.6 8.8 5.6 0.2 11.7 1.3 1.7 2 0 0 2 2 2 0 Epidermal patterning factor proteins TatD_DNase PF01026.21 CTQ27489.1 - 8.2e-75 251.5 0.0 9.3e-75 251.3 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase AP_endonuc_2 PF01261.24 CTQ27489.1 - 0.03 13.7 0.0 0.42 10.0 0.0 2.2 1 1 1 2 2 2 0 Xylose isomerase-like TIM barrel PTS_EIIC PF02378.18 CTQ27490.1 - 1.1e-84 284.2 32.8 1.1e-84 284.2 32.8 1.5 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ27490.1 - 1.5e-13 50.0 0.3 2.6e-13 49.2 0.3 1.4 1 0 0 1 1 1 1 phosphotransferase system, EIIB MscS_TM PF12794.7 CTQ27490.1 - 0.096 11.5 0.5 0.24 10.2 0.5 1.7 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 HIT PF01230.23 CTQ27491.1 - 2.9e-29 101.7 0.0 3.3e-29 101.5 0.0 1.0 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 CTQ27491.1 - 3e-22 79.2 0.0 3.3e-22 79.1 0.0 1.0 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding DUF1425 PF07233.12 CTQ27492.1 - 3.3e-25 87.8 0.0 3.9e-25 87.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1425) LpoB PF13036.6 CTQ27493.1 - 8.1e-36 123.2 0.0 9.7e-36 122.9 0.0 1.1 1 0 0 1 1 1 1 Peptidoglycan-synthase activator LpoB DUF2076 PF09849.9 CTQ27493.1 - 0.006 16.7 5.7 0.0069 16.5 5.7 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) DUF3280 PF11684.8 CTQ27493.1 - 0.013 16.0 0.1 0.02 15.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2380) Helitron_like_N PF14214.6 CTQ27493.1 - 0.17 12.1 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Helitron helicase-like domain at N-terminus APH PF01636.23 CTQ27494.1 - 3.1e-13 50.2 8.6 1.2e-12 48.3 8.6 1.8 1 1 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 CTQ27494.1 - 2e-05 24.3 0.0 3e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase Glyco_hydro_3 PF00933.21 CTQ27495.1 - 3.9e-98 328.8 0.0 5e-98 328.4 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain UPF0227 PF05728.12 CTQ27496.1 - 4.5e-70 235.4 0.0 5.1e-70 235.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) Pyr_redox_2 PF07992.14 CTQ27497.1 - 1.6e-70 237.7 0.2 1.9e-70 237.5 0.2 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ27497.1 - 2.9e-17 63.0 1.6 2.5e-10 40.8 0.4 3.0 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 CTQ27497.1 - 3.1e-09 36.9 6.0 0.039 13.6 0.0 4.1 3 1 1 4 4 4 3 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 CTQ27497.1 - 6.4e-06 25.5 2.3 0.23 10.5 0.1 3.6 3 1 0 3 3 3 3 Lycopene cyclase protein NAD_binding_9 PF13454.6 CTQ27497.1 - 1.9e-05 24.7 2.7 0.012 15.6 0.0 3.6 3 1 1 4 4 4 2 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 CTQ27497.1 - 0.00031 20.9 2.0 0.039 14.2 0.2 2.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 CTQ27497.1 - 0.0013 17.5 0.4 0.69 8.5 0.0 3.4 3 0 0 3 3 3 1 HI0933-like protein Pyr_redox_3 PF13738.6 CTQ27497.1 - 0.0016 17.8 0.0 0.71 9.1 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 CTQ27497.1 - 0.0017 17.5 0.0 1.7 7.7 0.0 2.3 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) Trp_halogenase PF04820.14 CTQ27497.1 - 0.0051 15.7 1.4 0.4 9.5 0.1 2.9 3 0 0 3 3 3 1 Tryptophan halogenase FAD_binding_3 PF01494.19 CTQ27497.1 - 0.025 13.8 1.6 4.7 6.4 0.1 2.9 3 0 0 3 3 3 0 FAD binding domain TrkA_N PF02254.18 CTQ27497.1 - 0.051 13.8 0.1 3.1 8.1 0.0 2.4 2 0 0 2 2 2 0 TrkA-N domain ApbA PF02558.16 CTQ27497.1 - 0.09 12.4 2.0 8.8 6.0 0.2 2.3 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA ThiF PF00899.21 CTQ27497.1 - 0.1 12.0 1.3 1.3 8.3 0.1 2.3 2 0 0 2 2 2 0 ThiF family Rick_17kDa_Anti PF05433.15 CTQ27498.1 - 1.1e-11 44.4 18.4 1.1e-11 44.4 18.4 2.3 2 1 0 2 2 2 1 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 CTQ27498.1 - 3.4e-05 23.7 16.4 3.4e-05 23.7 16.4 2.4 2 0 0 2 2 2 1 Glycine zipper Gly-zipper_YMGG PF13441.6 CTQ27498.1 - 0.00033 20.3 17.7 0.00033 20.3 17.7 2.2 2 0 0 2 2 2 1 YMGG-like Gly-zipper TraT PF05818.12 CTQ27498.1 - 0.0013 18.5 1.4 0.0013 18.5 1.4 1.6 2 0 0 2 2 2 1 Enterobacterial TraT complement resistance protein Chlam_OMP6 PF03504.13 CTQ27498.1 - 0.062 13.6 0.1 0.13 12.6 0.0 1.5 2 0 0 2 2 2 0 Chlamydia cysteine-rich outer membrane protein 6 DUF533 PF04391.12 CTQ27498.1 - 3.3 7.2 6.0 5.1 6.6 2.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF533) Bacteriocin_IIc PF10439.9 CTQ27498.1 - 9.4 6.4 21.3 0.26 11.4 8.9 2.2 2 0 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide TonB_dep_Rec PF00593.24 CTQ27499.1 - 2.1e-28 100.4 49.8 3.9e-28 99.5 49.7 1.5 1 1 0 1 1 1 1 TonB dependent receptor Plug PF07715.15 CTQ27499.1 - 3e-19 69.6 1.1 7e-19 68.4 1.1 1.7 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain TetR_N PF00440.23 CTQ27500.1 - 7.4e-15 54.5 0.2 1.6e-14 53.4 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_13 PF16925.5 CTQ27500.1 - 4.2e-05 23.5 0.3 0.00015 21.7 0.1 1.9 2 1 1 3 3 3 1 Tetracyclin repressor-like, C-terminal domain TetR_C_11 PF16859.5 CTQ27500.1 - 0.00023 21.5 0.6 0.00059 20.1 0.1 1.9 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_17 PF17922.1 CTQ27500.1 - 0.0093 16.1 0.0 0.021 14.9 0.0 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_6 PF13977.6 CTQ27500.1 - 0.0099 16.1 0.3 0.0099 16.1 0.3 2.0 2 1 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal DUF885 PF05960.11 CTQ27500.1 - 0.02 14.6 0.5 0.024 14.3 0.5 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) HTH_Tnp_Tc5 PF03221.16 CTQ27500.1 - 0.036 14.1 0.0 0.11 12.5 0.0 1.9 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain DUF1367 PF07105.11 CTQ27500.1 - 0.042 13.5 0.0 0.072 12.7 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1367) SLED PF12140.8 CTQ27500.1 - 0.061 13.8 0.1 0.11 13.0 0.1 1.4 1 0 0 1 1 1 0 SLED domain DUF1471 PF07338.13 CTQ27501.1 - 1.5e-19 69.7 0.1 2.1e-19 69.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) Ldt_C PF17969.1 CTQ27502.1 - 5.7e-26 91.0 0.1 9e-26 90.4 0.1 1.3 1 0 0 1 1 1 1 L,D-transpeptidase C-terminal domain YkuD PF03734.14 CTQ27502.1 - 1.4e-18 67.7 0.0 2.2e-18 67.1 0.0 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain LysM PF01476.20 CTQ27502.1 - 6.2e-08 32.6 0.0 2.1e-07 30.9 0.0 1.9 2 0 0 2 2 2 1 LysM domain TRCF PF03461.15 CTQ27503.1 - 1.8e-30 105.2 0.5 1.9e-29 101.9 0.0 2.7 3 0 0 3 3 3 1 TRCF domain CarD_CdnL_TRCF PF02559.16 CTQ27503.1 - 8.4e-25 87.3 0.0 3.4e-24 85.4 0.0 2.1 1 0 0 1 1 1 1 CarD-like/TRCF domain Helicase_C PF00271.31 CTQ27503.1 - 1.1e-21 77.2 1.1 8.1e-18 64.8 0.3 2.5 2 0 0 2 2 2 2 Helicase conserved C-terminal domain UvrB_inter PF17757.1 CTQ27503.1 - 1.7e-21 76.2 0.0 4.4e-21 74.9 0.0 1.8 1 0 0 1 1 1 1 UvrB interaction domain DEAD PF00270.29 CTQ27503.1 - 5.1e-21 75.2 0.1 1.4e-20 73.8 0.1 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 CTQ27503.1 - 2.8e-12 47.0 0.0 1.3e-11 44.8 0.0 2.2 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit UB2H PF14814.6 CTQ27503.1 - 3.7e-07 30.1 0.1 3.1e-05 23.9 0.0 2.8 2 0 0 2 2 2 1 Bifunctional transglycosylase second domain ERCC3_RAD25_C PF16203.5 CTQ27503.1 - 0.00044 19.6 0.0 0.00097 18.4 0.0 1.5 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 CTQ27503.1 - 0.22 11.8 1.0 2.1 8.6 0.2 3.1 2 1 0 2 2 2 0 AAA domain MacB_PCD PF12704.7 CTQ27504.1 - 8.3e-15 55.7 0.8 8.3e-15 55.7 0.8 1.9 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 CTQ27504.1 - 9.7e-14 51.6 5.9 9.7e-14 51.6 5.9 2.9 3 0 0 3 3 3 1 FtsX-like permease family Pam17 PF08566.10 CTQ27504.1 - 0.014 15.3 1.6 0.034 14.0 0.5 2.1 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 Gly-zipper_Omp PF13488.6 CTQ27504.1 - 0.016 15.2 1.4 0.041 13.9 1.4 1.7 1 0 0 1 1 1 0 Glycine zipper Rick_17kDa_Anti PF05433.15 CTQ27504.1 - 0.076 12.9 4.8 0.21 11.5 4.2 2.1 2 0 0 2 2 2 0 Glycine zipper 2TM domain Sigma_reg_N PF13800.6 CTQ27504.1 - 0.71 10.2 4.7 1.2 9.4 0.0 2.8 3 0 0 3 3 3 0 Sigma factor regulator N-terminal ABC_tran PF00005.27 CTQ27505.1 - 2e-35 122.3 0.0 2.8e-35 121.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 CTQ27505.1 - 1.4e-06 27.9 0.4 5e-05 22.8 0.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 CTQ27505.1 - 2.5e-06 27.5 0.6 0.05 13.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ27505.1 - 2.2e-05 24.9 2.3 8.1e-05 23.1 2.3 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ27505.1 - 0.0001 22.0 0.4 0.00018 21.2 0.4 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 CTQ27505.1 - 0.0016 18.6 1.2 0.012 15.8 1.2 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ27505.1 - 0.0047 16.8 0.1 0.0078 16.1 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase SbcCD_C PF13558.6 CTQ27505.1 - 0.0062 16.7 0.1 0.15 12.3 0.1 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 CTQ27505.1 - 0.017 14.9 0.4 0.27 10.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 CTQ27505.1 - 0.019 15.2 0.9 0.1 12.9 0.2 2.1 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 CTQ27505.1 - 0.046 13.1 0.1 0.078 12.3 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family MMR_HSR1 PF01926.23 CTQ27505.1 - 0.12 12.5 0.1 0.28 11.3 0.1 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase NB-ARC PF00931.22 CTQ27505.1 - 0.16 11.1 0.4 0.47 9.6 0.1 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_28 PF13521.6 CTQ27505.1 - 0.17 12.2 0.3 0.34 11.1 0.3 1.5 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 CTQ27505.1 - 0.18 11.9 0.8 0.35 10.9 0.8 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_18 PF13238.6 CTQ27505.1 - 0.19 12.3 2.3 0.52 10.9 2.3 2.0 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 CTQ27505.1 - 0.2 12.1 0.1 0.34 11.4 0.1 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ27505.1 - 0.32 10.9 1.5 0.49 10.3 0.5 1.7 2 0 0 2 2 2 0 NACHT domain MacB_PCD PF12704.7 CTQ27506.1 - 2.3e-15 57.5 1.0 2.3e-15 57.5 1.0 2.6 3 0 0 3 3 3 2 MacB-like periplasmic core domain FtsX PF02687.21 CTQ27506.1 - 2.2e-12 47.3 13.1 7.4e-12 45.6 2.4 3.2 3 0 0 3 3 3 2 FtsX-like permease family Sensor PF13796.6 CTQ27506.1 - 0.0027 17.8 11.1 0.8 9.7 0.2 3.2 2 1 0 2 2 2 2 Putative sensor ROK PF00480.20 CTQ27507.1 - 3.1e-66 223.8 0.0 3.5e-66 223.7 0.0 1.0 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 CTQ27507.1 - 2.9e-09 36.4 0.0 2e-08 33.6 0.0 1.9 1 1 0 1 1 1 1 Glucokinase SIR2 PF02146.17 CTQ27508.1 - 2.3e-50 171.0 0.0 3.1e-50 170.5 0.0 1.2 1 0 0 1 1 1 1 Sir2 family Glyco_transf_28 PF03033.20 CTQ27508.1 - 0.007 16.4 0.1 0.051 13.6 0.1 2.1 2 0 0 2 2 2 1 Glycosyltransferase family 28 N-terminal domain TPP_enzyme_M PF00205.22 CTQ27508.1 - 0.088 12.5 0.0 0.23 11.2 0.0 1.7 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain ATPase_gene1 PF09527.10 CTQ27509.1 - 0.0044 17.2 0.6 0.01 16.0 0.6 1.6 1 0 0 1 1 1 1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Sugar-bind PF04198.13 CTQ27510.1 - 9.5e-79 264.1 0.4 1.4e-78 263.6 0.4 1.2 1 0 0 1 1 1 1 Putative sugar-binding domain HTH_28 PF13518.6 CTQ27510.1 - 1.4e-07 31.5 1.1 9.2e-06 25.7 0.3 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 CTQ27510.1 - 1.1e-06 28.0 0.4 3.5e-06 26.4 0.5 1.8 2 0 0 2 2 1 1 Sigma-70, region 4 HTH_23 PF13384.6 CTQ27510.1 - 8.3e-05 22.3 0.1 8.3e-05 22.3 0.1 2.7 3 0 0 3 3 3 1 Homeodomain-like domain HTH_24 PF13412.6 CTQ27510.1 - 9.2e-05 21.9 0.0 0.00018 21.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 CTQ27510.1 - 9.3e-05 22.3 0.0 0.00033 20.6 0.0 1.9 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 CTQ27510.1 - 0.0011 18.8 0.3 0.006 16.5 0.1 2.3 2 0 0 2 2 2 1 MarR family Rrf2 PF02082.20 CTQ27510.1 - 0.0017 18.7 0.4 0.0044 17.3 0.1 1.9 2 0 0 2 2 2 1 Transcriptional regulator Sigma70_r4_2 PF08281.12 CTQ27510.1 - 0.0019 17.9 0.2 0.0044 16.7 0.2 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_36 PF13730.6 CTQ27510.1 - 0.0097 15.8 0.0 0.023 14.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 CTQ27510.1 - 0.015 15.3 0.2 0.045 13.8 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn helix TrmB PF01978.19 CTQ27510.1 - 0.027 14.4 0.1 0.063 13.2 0.1 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF134 PF02001.16 CTQ27510.1 - 0.069 13.7 0.1 0.5 10.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function DUF134 Sigma70_r3 PF04539.16 CTQ27510.1 - 0.1 12.7 0.0 0.28 11.3 0.0 1.7 1 0 0 1 1 1 0 Sigma-70 region 3 CENP-B_N PF04218.13 CTQ27510.1 - 0.13 11.9 0.1 0.85 9.3 0.1 2.3 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain Phage_antitermQ PF06530.12 CTQ27510.1 - 0.14 12.1 0.2 0.54 10.2 0.1 1.9 2 0 0 2 2 2 0 Phage antitermination protein Q TIM PF00121.18 CTQ27511.1 - 3.1e-79 265.8 0.0 3.5e-79 265.6 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase CLIP1_ZNF PF16641.5 CTQ27511.1 - 0.081 12.8 0.1 0.081 12.8 0.1 2.7 3 0 0 3 3 3 0 CLIP1 zinc knuckle PdxA PF04166.12 CTQ27512.1 - 1.4e-90 303.5 0.1 1.7e-90 303.3 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA Rapsyn_N PF10579.9 CTQ27512.1 - 0.036 14.2 0.0 0.095 12.8 0.0 1.7 1 0 0 1 1 1 0 Rapsyn N-terminal myristoylation and linker region SBD_N PF07005.11 CTQ27513.1 - 8.1e-57 192.6 2.5 8.1e-57 192.6 2.5 1.7 2 0 0 2 2 2 1 Sugar-binding N-terminal domain EIIBC-GUT_N PF03612.14 CTQ27513.1 - 1.4e-49 168.3 0.3 3.3e-49 167.1 0.1 1.9 2 0 0 2 2 2 1 Sorbitol phosphotransferase enzyme II N-terminus NBD_C PF17042.5 CTQ27513.1 - 1.4e-31 110.3 0.1 1.4e-31 110.3 0.1 1.9 2 0 0 2 2 2 1 Nucleotide-binding C-terminal domain KdgT PF03812.13 CTQ27514.1 - 1.6e-108 362.7 31.8 1.8e-108 362.5 31.8 1.0 1 0 0 1 1 1 1 2-keto-3-deoxygluconate permease DUF2953 PF11167.8 CTQ27514.1 - 0.031 14.3 6.4 0.14 12.3 0.7 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2953) DUF5619 PF18505.1 CTQ27514.1 - 0.036 14.1 0.1 0.06 13.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5619) TMEM238 PF15125.6 CTQ27514.1 - 7.8 6.8 14.0 0.44 10.8 1.4 3.2 3 0 0 3 3 3 0 TMEM238 protein family PTSIIA_gutA PF03829.13 CTQ27515.1 - 6.8e-34 116.1 0.0 7.6e-34 116.0 0.0 1.0 1 0 0 1 1 1 1 PTS system glucitol/sorbitol-specific IIA component LacAB_rpiB PF02502.18 CTQ27516.1 - 4.2e-48 162.9 0.4 4.9e-48 162.7 0.4 1.0 1 0 0 1 1 1 1 Ribose/Galactose Isomerase TAL_FSA PF00923.19 CTQ27517.1 - 2.5e-95 319.1 0.0 2.8e-95 319.0 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase AMP-binding PF00501.28 CTQ27518.1 - 7.6e-86 288.3 0.0 9.6e-86 288.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CTQ27518.1 - 3.8e-13 50.2 0.0 7.3e-13 49.3 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Aldedh PF00171.22 CTQ27519.1 - 2.7e-19 69.0 0.2 3.4e-10 39.0 0.0 3.2 3 0 0 3 3 3 3 Aldehyde dehydrogenase family SBP_bac_6 PF13343.6 CTQ27520.1 - 5.9e-38 130.7 2.7 7.9e-38 130.3 2.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 CTQ27520.1 - 1.6e-37 129.9 6.5 2e-37 129.6 6.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 CTQ27520.1 - 5.1e-13 49.3 0.0 8e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ27520.1 - 1e-12 48.7 9.0 1.8e-12 47.9 9.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Lipoprotein_8 PF02030.15 CTQ27520.1 - 3.1e-09 36.1 0.6 1.2e-08 34.1 0.1 2.0 2 1 0 2 2 2 1 Hypothetical lipoprotein (MG045 family) BPD_transp_1 PF00528.22 CTQ27521.1 - 1.7e-19 70.3 16.3 1.7e-19 70.3 16.3 2.1 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component DUF3341 PF11821.8 CTQ27521.1 - 0.32 10.6 8.6 0.4 10.3 7.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3341) BPD_transp_1 PF00528.22 CTQ27522.1 - 5.8e-18 65.3 16.1 5.8e-18 65.3 16.1 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 CTQ27523.1 - 1.3e-36 126.1 0.0 2.7e-36 125.1 0.0 1.5 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 CTQ27523.1 - 1.5e-08 34.7 0.0 3.6e-08 33.5 0.0 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 CTQ27523.1 - 2.1e-06 27.8 0.0 0.037 13.8 0.0 2.7 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system TniB PF05621.11 CTQ27523.1 - 1.5e-05 24.5 0.4 0.0071 15.8 0.3 3.2 3 0 0 3 3 3 1 Bacterial TniB protein AAA_22 PF13401.6 CTQ27523.1 - 1.8e-05 25.0 0.7 0.00012 22.3 0.7 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ27523.1 - 4.4e-05 23.0 0.7 0.0018 17.7 0.7 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 CTQ27523.1 - 0.00059 20.3 0.0 0.0066 16.9 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 CTQ27523.1 - 0.0023 17.9 0.0 0.004 17.1 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 CTQ27523.1 - 0.0052 16.7 0.2 0.022 14.7 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 CTQ27523.1 - 0.0074 16.7 0.3 0.014 15.8 0.3 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 CTQ27523.1 - 0.0082 15.7 0.1 0.73 9.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 CTQ27523.1 - 0.018 15.3 0.0 1.5 9.0 0.0 2.5 2 1 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 CTQ27523.1 - 0.019 13.8 0.0 0.15 10.9 0.0 2.1 1 1 0 1 1 1 0 Predicted ATPase of the ABC class AAA_18 PF13238.6 CTQ27523.1 - 0.037 14.6 0.0 0.13 12.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 CTQ27523.1 - 0.073 13.1 0.3 0.27 11.2 0.1 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 CTQ27523.1 - 0.075 13.1 0.0 0.45 10.5 0.0 2.3 3 0 0 3 3 2 0 AAA domain PhoH PF02562.16 CTQ27523.1 - 0.086 12.3 0.1 2.3 7.6 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein sCache_3_2 PF17203.4 CTQ27523.1 - 0.11 12.6 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Single cache domain 3 AAA_30 PF13604.6 CTQ27523.1 - 0.11 12.2 0.0 0.5 10.1 0.0 2.0 3 0 0 3 3 3 0 AAA domain Mg_chelatase PF01078.21 CTQ27523.1 - 0.13 11.6 0.0 0.25 10.7 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI SbcCD_C PF13558.6 CTQ27523.1 - 0.15 12.3 0.1 1.4 9.2 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 CTQ27523.1 - 0.19 11.5 0.1 0.46 10.3 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ27523.1 - 0.24 11.9 2.2 0.36 11.3 0.4 2.0 2 0 0 2 2 2 0 AAA domain Peptidase_M20 PF01546.28 CTQ27524.1 - 2.3e-17 63.4 0.7 4.4e-17 62.5 0.7 1.5 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ27524.1 - 3.2e-11 43.1 0.5 8.7e-11 41.7 0.2 1.8 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M42 PF05343.14 CTQ27524.1 - 4.2e-08 32.6 0.1 9.3e-05 21.6 0.0 2.2 2 0 0 2 2 2 2 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 CTQ27524.1 - 0.017 14.8 0.1 0.032 13.9 0.1 1.5 1 0 0 1 1 1 0 Peptidase family M28 Alba PF01918.21 CTQ27524.1 - 0.13 12.1 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Alba Cupin_4 PF08007.12 CTQ27525.1 - 9.5e-104 347.3 0.0 1.1e-103 347.0 0.0 1.1 1 0 0 1 1 1 1 Cupin superfamily protein Cupin_2 PF07883.11 CTQ27525.1 - 0.0038 16.9 0.2 0.21 11.3 0.0 2.6 2 0 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 CTQ27525.1 - 0.016 14.9 0.0 0.025 14.2 0.0 1.3 1 0 0 1 1 1 0 Cupin Cupin_8 PF13621.6 CTQ27525.1 - 0.03 14.1 0.1 0.081 12.6 0.0 1.7 2 0 0 2 2 2 0 Cupin-like domain AraC_binding PF02311.19 CTQ27525.1 - 0.051 13.5 0.1 0.18 11.7 0.0 2.1 2 0 0 2 2 2 0 AraC-like ligand binding domain PhoQ_Sensor PF08918.10 CTQ27526.1 - 7.6e-86 286.5 0.9 1.1e-85 286.0 0.1 1.6 2 0 0 2 2 2 1 PhoQ Sensor HATPase_c PF02518.26 CTQ27526.1 - 2.9e-13 50.3 0.0 5.7e-13 49.4 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 CTQ27526.1 - 6e-06 26.1 0.0 1.2e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 GHKL domain HAMP PF00672.25 CTQ27526.1 - 0.00041 20.7 0.7 0.0015 18.9 0.1 2.2 2 0 0 2 2 2 1 HAMP domain HisKA PF00512.25 CTQ27526.1 - 0.0042 17.1 4.6 0.0079 16.2 0.1 3.0 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 CTQ27526.1 - 0.014 15.2 0.0 0.027 14.3 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 CTQ27526.1 - 0.033 14.1 0.0 0.063 13.2 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Suv3_C_1 PF18147.1 CTQ27526.1 - 0.15 12.0 0.0 0.31 11.0 0.0 1.5 1 0 0 1 1 1 0 Suv3 C-terminal domain 1 Wbp11 PF09429.10 CTQ27526.1 - 0.48 10.9 2.3 8.8 6.8 0.4 2.4 2 0 0 2 2 2 0 WW domain binding protein 11 Response_reg PF00072.24 CTQ27527.1 - 5.9e-25 87.6 0.0 9.4e-25 87.0 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ27527.1 - 1.8e-20 72.8 0.1 3.4e-20 71.9 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal FleQ PF06490.11 CTQ27527.1 - 0.0029 18.0 0.0 0.0047 17.3 0.0 1.3 1 0 0 1 1 1 1 Flagellar regulatory protein FleQ AraC_binding PF02311.19 CTQ27528.1 - 5.2e-24 84.7 0.7 8.5e-24 84.0 0.7 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_18 PF12833.7 CTQ27528.1 - 7.1e-17 61.5 0.5 1.6e-16 60.3 0.5 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ27528.1 - 6.4e-09 35.7 0.1 1.1e-05 25.3 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ27529.1 - 3.8e-12 45.7 0.7 6.1e-12 45.1 0.5 1.3 1 1 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 CTQ27529.1 - 6.8e-05 22.8 0.0 8.8e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 CTQ27529.1 - 0.00013 21.6 0.0 0.00019 21.0 0.0 1.3 1 0 0 1 1 1 1 Cupin EutQ PF06249.12 CTQ27529.1 - 0.00013 21.8 0.0 0.00018 21.3 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ MannoseP_isomer PF01050.18 CTQ27529.1 - 0.00029 20.7 0.1 0.00033 20.6 0.1 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_3 PF05899.12 CTQ27529.1 - 0.00032 20.3 0.1 0.00054 19.6 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_7 PF12973.7 CTQ27529.1 - 0.00042 20.2 0.1 0.00081 19.3 0.0 1.6 2 0 0 2 2 2 1 ChrR Cupin-like domain ARD PF03079.14 CTQ27529.1 - 0.004 17.3 0.1 0.0049 17.1 0.1 1.2 1 0 0 1 1 1 1 ARD/ARD' family Cupin_6 PF12852.7 CTQ27529.1 - 0.012 15.4 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Cupin HgmA PF04209.13 CTQ27529.1 - 0.039 12.7 0.0 0.04 12.6 0.0 1.1 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase DUF4437 PF14499.6 CTQ27529.1 - 0.051 12.7 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4437) Lyase_1 PF00206.20 CTQ27530.1 - 7.9e-82 275.1 0.0 9.8e-82 274.8 0.0 1.1 1 0 0 1 1 1 1 Lyase ASL_C PF08328.11 CTQ27530.1 - 5.9e-53 177.9 0.2 2.4e-52 175.9 0.0 2.1 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminal DUF489 PF04356.12 CTQ27531.1 - 1.8e-74 249.9 0.4 2.1e-74 249.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF489) tRNA_Me_trans PF03054.16 CTQ27532.1 - 4.5e-144 479.6 0.0 5.2e-144 479.4 0.0 1.0 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 CTQ27532.1 - 3.7e-09 36.1 0.0 3.6e-07 29.6 0.0 2.2 2 0 0 2 2 2 2 NAD synthase ThiI PF02568.14 CTQ27532.1 - 1.5e-07 31.3 0.0 2.1e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 CTQ27532.1 - 0.00016 21.3 0.0 0.00049 19.7 0.0 1.8 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 CTQ27532.1 - 0.00022 21.0 0.0 0.00028 20.6 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase Diphthami_syn_2 PF01902.17 CTQ27532.1 - 0.076 12.5 0.0 0.17 11.3 0.0 1.6 2 0 0 2 2 2 0 Diphthamide synthase ATP_bind_3 PF01171.20 CTQ27532.1 - 0.11 12.3 0.2 0.37 10.5 0.1 2.0 2 1 0 2 2 2 0 PP-loop family NUDIX PF00293.28 CTQ27533.1 - 5.4e-17 62.1 0.1 6.8e-17 61.7 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain PseudoU_synth_2 PF00849.22 CTQ27534.1 - 2.6e-14 53.6 0.1 5.8e-13 49.2 0.0 2.6 1 1 1 2 2 2 1 RNA pseudouridylate synthase Iso_dh PF00180.20 CTQ27535.1 - 6.3e-118 393.9 0.0 7.2e-118 393.7 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase tRNA_synt_1c_R1 PF04558.15 CTQ27535.1 - 0.086 12.8 0.1 0.61 10.1 0.0 2.0 2 0 0 2 2 2 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 HTH_5 PF01022.20 CTQ27536.1 - 1.7e-08 34.2 0.0 3e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 CTQ27536.1 - 2.7e-08 33.8 0.4 6.7e-08 32.5 0.4 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 CTQ27536.1 - 0.00061 19.6 0.1 0.033 14.1 0.2 2.4 2 0 0 2 2 2 1 MarR family MarR PF01047.22 CTQ27536.1 - 0.00063 19.6 0.0 0.012 15.5 0.0 2.3 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 CTQ27536.1 - 0.0064 16.4 0.0 0.017 15.0 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 CTQ27536.1 - 0.0064 16.3 0.3 0.017 14.9 0.3 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 CTQ27536.1 - 0.028 14.0 0.0 0.058 13.0 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 CTQ27536.1 - 0.038 14.2 0.0 0.66 10.2 0.0 2.4 2 0 0 2 2 2 0 Winged helix DNA-binding domain ACT PF01842.25 CTQ27537.1 - 8.6e-05 22.2 0.7 0.0095 15.7 0.1 2.8 2 2 1 3 3 3 2 ACT domain ACT_4 PF13291.6 CTQ27537.1 - 0.079 13.6 0.0 9 7.0 0.0 2.2 2 0 0 2 2 2 0 ACT domain ABM PF03992.16 CTQ27538.1 - 1e-13 51.2 0.0 1.3e-13 50.8 0.0 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase ADH_N PF08240.12 CTQ27540.1 - 1.5e-29 102.1 0.2 7e-29 99.9 0.1 2.0 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.6 CTQ27540.1 - 2.3e-11 43.4 0.0 4.7e-11 42.4 0.0 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-associated ADH_zinc_N PF00107.26 CTQ27540.1 - 2.4e-08 34.0 0.0 3.8e-07 30.1 0.0 2.3 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 CTQ27540.1 - 0.0033 18.5 0.2 0.021 15.9 0.2 2.1 1 1 0 1 1 1 1 Zinc-binding dehydrogenase Pyr_redox_2 PF07992.14 CTQ27540.1 - 0.019 14.2 0.2 0.14 11.3 0.0 2.5 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Glu_dehyd_C PF16912.5 CTQ27540.1 - 0.025 14.1 0.0 0.14 11.6 0.0 2.2 3 0 0 3 3 3 0 Glucose dehydrogenase C-terminus Pyr_redox_3 PF13738.6 CTQ27540.1 - 0.032 13.5 0.0 0.054 12.7 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ27540.1 - 0.047 12.4 0.0 0.065 11.9 0.0 1.2 1 0 0 1 1 1 0 HI0933-like protein AlaDh_PNT_C PF01262.21 CTQ27540.1 - 0.08 12.2 0.1 0.16 11.2 0.0 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 CTQ27540.1 - 0.083 12.5 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KGG PF10685.9 CTQ27541.1 - 3.9e-19 68.3 16.2 3.7e-10 39.7 5.2 2.7 3 0 0 3 3 3 2 Stress-induced bacterial acidophilic repeat motif DUF892 PF05974.12 CTQ27542.1 - 6.3e-55 185.5 12.7 7e-55 185.4 12.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) Rubrerythrin PF02915.17 CTQ27542.1 - 0.012 16.1 7.8 0.053 13.9 7.8 2.0 1 1 0 1 1 1 0 Rubrerythrin DUF1847 PF08901.11 CTQ27542.1 - 0.02 14.6 2.6 0.031 13.9 1.8 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1847) DUF892 PF05974.12 CTQ27543.1 - 5.3e-48 163.0 0.6 5.8e-48 162.9 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) HrpJ PF07201.11 CTQ27543.1 - 0.0082 16.5 0.2 0.013 15.8 0.2 1.3 1 0 0 1 1 1 1 HrpJ-like domain HTH_46 PF15977.5 CTQ27543.1 - 0.013 15.5 0.2 0.024 14.6 0.2 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding Ferritin PF00210.24 CTQ27543.1 - 0.02 14.8 2.6 0.076 13.0 0.1 2.1 2 0 0 2 2 2 0 Ferritin-like domain Peptidase_M30 PF10460.9 CTQ27543.1 - 0.079 11.9 0.0 0.15 11.0 0.0 1.6 2 0 0 2 2 2 0 Peptidase M30 Mn_catalase PF05067.12 CTQ27544.1 - 1.1e-91 306.7 0.0 1.3e-91 306.5 0.0 1.0 1 0 0 1 1 1 1 Manganese containing catalase COQ7 PF03232.13 CTQ27544.1 - 9.2e-05 22.3 0.0 0.068 12.9 0.0 2.2 2 0 0 2 2 2 2 Ubiquinone biosynthesis protein COQ7 Rubrerythrin PF02915.17 CTQ27544.1 - 0.11 12.9 0.0 3.7 7.9 0.0 2.2 2 0 0 2 2 2 0 Rubrerythrin Cyt_bd_oxida_I PF01654.17 CTQ27546.1 - 4.8e-165 549.2 23.2 5.4e-165 549.1 23.2 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I DUF4235 PF14019.6 CTQ27546.1 - 0.0019 18.2 0.4 0.0019 18.2 0.4 3.1 3 0 0 3 3 3 1 Protein of unknown function (DUF4235) Cyt_bd_oxida_II PF02322.15 CTQ27547.1 - 5.2e-96 321.6 37.5 5.9e-96 321.4 37.5 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II HTH_39 PF14090.6 CTQ27550.1 - 2.7e-07 30.2 0.2 2.4e-06 27.2 0.0 2.5 3 0 0 3 3 3 1 Helix-turn-helix domain Ribosomal_S18 PF01084.20 CTQ27550.1 - 0.14 12.4 0.6 0.26 11.5 0.6 1.4 1 0 0 1 1 1 0 Ribosomal protein S18 EAL PF00563.20 CTQ27553.1 - 1.5e-17 63.9 0.0 1.7e-17 63.8 0.0 1.1 1 0 0 1 1 1 1 EAL domain QLQ PF08880.11 CTQ27554.1 - 0.12 12.1 1.3 0.19 11.5 1.3 1.3 1 0 0 1 1 1 0 QLQ UbiD PF01977.16 CTQ27555.1 - 1.5e-97 327.1 0.0 1.7e-97 326.9 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LysR_substrate PF03466.20 CTQ27556.1 - 1.1e-41 142.5 4.8 1.1e-41 142.5 4.8 1.5 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27556.1 - 7.9e-22 77.0 3.8 1.5e-21 76.0 3.8 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ27556.1 - 0.0029 17.4 1.7 0.011 15.6 1.7 2.0 1 1 0 1 1 1 1 PucR C-terminal helix-turn-helix domain MarR_2 PF12802.7 CTQ27556.1 - 0.024 14.5 0.4 0.15 11.9 0.4 2.2 2 0 0 2 2 2 0 MarR family GGDEF PF00990.21 CTQ27557.1 - 2.1e-44 151.1 0.6 1.4e-43 148.4 0.1 2.3 2 0 0 2 2 2 1 Diguanylate cyclase, GGDEF domain HAMP PF00672.25 CTQ27557.1 - 4.5e-07 30.1 0.4 3.3e-06 27.4 0.0 2.6 2 0 0 2 2 2 1 HAMP domain GAF PF01590.26 CTQ27557.1 - 0.00043 20.9 0.0 0.0013 19.3 0.0 2.0 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 CTQ27557.1 - 0.0018 18.6 0.4 0.014 15.7 0.0 2.5 2 0 0 2 2 2 1 GAF domain GAF_3 PF13492.6 CTQ27557.1 - 0.01 16.2 0.0 0.025 14.9 0.0 1.7 1 0 0 1 1 1 0 GAF domain Spore_III_AB PF09548.10 CTQ27557.1 - 0.041 14.0 0.9 0.18 11.9 0.9 2.3 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) GGDEF_2 PF17853.1 CTQ27557.1 - 0.057 13.7 6.9 0.06 13.6 0.1 3.5 2 1 0 3 3 3 0 GGDEF-like domain COX4 PF02936.14 CTQ27557.1 - 0.19 11.8 0.0 3.2 7.8 0.0 2.6 2 0 0 2 2 2 0 Cytochrome c oxidase subunit IV HD PF01966.22 CTQ27558.1 - 4.5e-28 97.9 5.7 4.8e-18 65.5 0.2 2.4 2 0 0 2 2 2 2 HD domain HD_5 PF13487.6 CTQ27558.1 - 3.5e-13 49.6 0.6 1.3e-12 47.8 0.2 2.2 2 0 0 2 2 2 1 HD domain HDOD PF08668.12 CTQ27558.1 - 1.8e-12 47.2 0.1 2.2e-05 24.0 0.1 2.3 2 0 0 2 2 2 2 HDOD domain HD_6 PF18019.1 CTQ27558.1 - 0.1 12.7 2.6 2.5 8.2 0.0 2.7 2 1 0 2 2 2 0 HD domain Asparaginase PF00710.20 CTQ27559.1 - 3.4e-57 193.1 1.5 4.7e-57 192.6 1.5 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 CTQ27559.1 - 7.5e-24 84.2 0.1 3.5e-23 82.0 0.0 2.2 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain Lip_A_acyltrans PF03279.13 CTQ27560.1 - 1.6e-96 323.0 0.0 1.8e-96 322.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase LysE PF01810.18 CTQ27561.1 - 1.4e-51 174.7 13.5 1.7e-51 174.4 13.5 1.1 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 CTQ27561.1 - 0.0031 17.2 4.1 0.009 15.7 4.1 1.9 1 1 0 1 1 1 1 Integral membrane protein TerC family VitK2_biosynth PF02621.14 CTQ27561.1 - 0.013 15.0 0.0 0.018 14.6 0.0 1.1 1 0 0 1 1 1 0 Menaquinone biosynthesis Mntp PF02659.15 CTQ27561.1 - 0.072 12.8 6.9 0.22 11.3 6.0 2.3 1 1 0 1 1 1 0 Putative manganese efflux pump DUF373 PF04123.13 CTQ27561.1 - 0.086 12.3 10.2 0.022 14.2 6.3 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF373) DUF2534 PF10749.9 CTQ27562.1 - 7.1e-40 135.0 1.7 7.9e-40 134.9 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2534) IncD PF17628.2 CTQ27562.1 - 0.036 13.8 0.7 0.042 13.6 0.7 1.1 1 0 0 1 1 1 0 Inclusion membrane protein D DUF3671 PF12420.8 CTQ27562.1 - 0.11 12.6 1.0 0.15 12.1 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function TCR_zetazeta PF11628.8 CTQ27562.1 - 0.2 11.4 1.0 0.46 10.2 1.0 1.7 1 1 0 1 1 1 0 T-cell surface glycoprotein CD3 zeta chain GGDEF PF00990.21 CTQ27563.1 - 4.9e-41 140.2 1.2 2e-40 138.2 0.0 2.4 3 0 0 3 3 3 1 Diguanylate cyclase, GGDEF domain GAF_2 PF13185.6 CTQ27563.1 - 1.4e-10 41.6 0.0 2.7e-10 40.7 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 CTQ27563.1 - 8.8e-06 26.4 0.3 2.5e-05 24.9 0.1 1.8 2 1 0 2 2 2 1 GAF domain GAF_3 PF13492.6 CTQ27563.1 - 4.1e-05 23.9 0.0 0.0001 22.7 0.0 1.7 1 0 0 1 1 1 1 GAF domain Autoind_bind PF03472.15 CTQ27563.1 - 0.0041 16.6 0.0 0.05 13.1 0.0 2.3 1 1 1 2 2 2 1 Autoinducer binding domain DUF333 PF03891.15 CTQ27565.1 - 4.2e-18 65.3 0.0 5.2e-18 65.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF333) DUF488 PF04343.13 CTQ27566.1 - 9.7e-32 110.1 1.0 1.1e-31 110.0 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF488 DUF523 PF04463.12 CTQ27567.1 - 9.3e-37 126.1 0.0 1.1e-36 126.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF523) TetR_C_7 PF14246.6 CTQ27567.1 - 0.045 13.8 0.0 0.089 12.8 0.0 1.4 1 0 0 1 1 1 0 AefR-like transcriptional repressor, C-terminal domain GATase PF00117.28 CTQ27568.1 - 5.2e-17 62.2 0.0 6.1e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 CTQ27568.1 - 0.00033 20.5 0.0 0.00048 19.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 CTQ27568.1 - 0.09 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ThuA PF06283.11 CTQ27568.1 - 0.11 12.8 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Trehalose utilisation MFS_1 PF07690.16 CTQ27569.1 - 6.6e-25 87.8 53.6 4.9e-22 78.3 51.0 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF2306 PF10067.9 CTQ27569.1 - 0.035 14.3 17.6 0.23 11.6 2.1 3.2 2 2 0 2 2 2 0 Predicted membrane protein (DUF2306) PTPS_related PF10131.9 CTQ27569.1 - 0.96 7.7 5.7 0.081 11.2 0.7 1.7 2 0 0 2 2 2 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein HTH_18 PF12833.7 CTQ27570.1 - 2e-19 69.6 0.4 3.3e-19 68.9 0.4 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ27570.1 - 3.3e-08 33.4 0.0 0.00087 19.3 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ27570.1 - 0.0018 18.0 0.0 0.003 17.2 0.0 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 CTQ27570.1 - 0.012 15.5 0.0 0.027 14.4 0.0 1.7 1 1 0 1 1 1 0 AraC-like ligand binding domain NCD2 PF04905.13 CTQ27570.1 - 0.053 13.5 0.0 0.51 10.3 0.0 2.1 1 1 1 2 2 2 0 NAB conserved region 2 (NCD2) Cupin_7 PF12973.7 CTQ27570.1 - 0.073 13.0 0.0 0.19 11.7 0.0 1.7 1 0 0 1 1 1 0 ChrR Cupin-like domain HTH_23 PF13384.6 CTQ27570.1 - 0.26 11.1 1.4 0.76 9.7 0.7 2.1 1 1 1 2 2 2 0 Homeodomain-like domain DUF441 PF04284.13 CTQ27571.1 - 4.8e-46 156.2 18.5 5.5e-46 156.0 18.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF441) CPP1-like PF11833.8 CTQ27571.1 - 0.37 10.4 6.9 0.086 12.5 3.6 1.7 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like tRNA_edit PF04073.15 CTQ27572.1 - 1.7e-24 86.2 0.0 2.2e-24 85.9 0.0 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain Glyco_transf_9 PF01075.17 CTQ27573.1 - 2.1e-12 46.9 0.1 4.8e-12 45.7 0.1 1.6 1 1 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Lipase_GDSL_3 PF14606.6 CTQ27573.1 - 0.0013 18.9 0.1 0.036 14.2 0.0 2.2 2 0 0 2 2 2 1 GDSL-like Lipase/Acylhydrolase family Zeta_toxin PF06414.12 CTQ27573.1 - 0.0056 16.0 0.0 0.0099 15.2 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin Glyco_transf_4 PF13439.6 CTQ27573.1 - 0.026 14.6 2.3 0.12 12.4 0.1 2.3 2 0 0 2 2 2 0 Glycosyltransferase Family 4 DinI PF06183.13 CTQ27574.1 - 4.4e-22 78.2 0.1 5.4e-22 77.9 0.1 1.1 1 0 0 1 1 1 1 DinI-like family HTH_Tnp_Tc3_2 PF01498.18 CTQ27574.1 - 0.075 13.3 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Transposase Peptidase_S24 PF00717.23 CTQ27575.1 - 5.6e-12 45.4 0.0 8.1e-12 44.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase S24-like IMS PF00817.20 CTQ27576.1 - 1.7e-33 115.8 0.0 7.1e-33 113.7 0.0 2.0 2 0 0 2 2 2 1 impB/mucB/samB family DUF4113 PF13438.6 CTQ27576.1 - 1.1e-22 79.8 0.1 2.7e-22 78.6 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4113) IMS_C PF11799.8 CTQ27576.1 - 3.5e-14 53.5 0.0 1.1e-13 52.0 0.0 1.7 2 0 0 2 2 2 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 CTQ27576.1 - 2.3e-07 30.7 0.1 5.6e-07 29.5 0.1 1.7 1 0 0 1 1 1 1 IMS family HHH motif DNA_pol_lambd_f PF10391.9 CTQ27576.1 - 0.054 13.3 0.1 0.41 10.5 0.0 2.5 2 0 0 2 2 2 0 Fingers domain of DNA polymerase lambda LysR_substrate PF03466.20 CTQ27577.1 - 2.5e-39 134.8 0.1 4.6e-39 133.9 0.1 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27577.1 - 1.1e-19 70.1 0.8 1.9e-19 69.4 0.8 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ27577.1 - 0.082 12.7 0.1 0.17 11.7 0.1 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain VirC2 PF07181.11 CTQ27577.1 - 0.093 12.2 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 VirC2 protein adh_short_C2 PF13561.6 CTQ27578.1 - 6.4e-60 202.6 1.8 7.9e-60 202.3 1.8 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27578.1 - 1.4e-48 164.9 0.6 1.7e-48 164.7 0.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ27578.1 - 7.6e-12 45.5 2.3 1.1e-11 45.0 2.3 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ27578.1 - 0.002 17.7 0.4 0.013 14.9 0.4 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Eno-Rase_NADH_b PF12242.8 CTQ27578.1 - 0.012 15.3 0.4 0.023 14.4 0.4 1.4 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NAD_binding_2 PF03446.15 CTQ27578.1 - 0.076 13.2 0.1 0.54 10.4 0.0 2.0 1 1 1 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Helicase_RecD PF05127.14 CTQ27578.1 - 0.13 12.1 0.2 0.3 10.9 0.0 1.6 2 0 0 2 2 2 0 Helicase ADH_zinc_N PF00107.26 CTQ27578.1 - 0.14 12.2 2.3 0.75 9.8 2.3 2.0 1 1 0 1 1 1 0 Zinc-binding dehydrogenase CwsA PF10814.8 CTQ27578.1 - 0.15 12.3 2.4 0.13 12.4 0.4 1.8 2 0 0 2 2 2 0 Cell wall synthesis protein CwsA MFS_1 PF07690.16 CTQ27579.1 - 9.7e-32 110.2 54.6 9.7e-32 110.2 54.6 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily LysR_substrate PF03466.20 CTQ27580.1 - 2.3e-23 82.7 4.0 3.4e-23 82.1 4.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27580.1 - 6.7e-17 61.2 0.0 1.2e-16 60.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ27580.1 - 0.0081 15.9 0.0 0.02 14.7 0.0 1.6 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain LigT_PEase PF02834.16 CTQ27580.1 - 0.017 15.3 0.0 0.049 13.8 0.0 1.7 1 0 0 1 1 1 0 LigT like Phosphoesterase MarR PF01047.22 CTQ27580.1 - 0.039 13.9 0.0 0.089 12.7 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 CTQ27580.1 - 0.087 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 HTH domain DUF4188 PF13826.6 CTQ27581.1 - 0.025 14.9 0.1 0.026 14.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4188) Phage_tail_T PF06223.12 CTQ27581.1 - 0.096 13.2 0.1 0.14 12.7 0.1 1.2 1 0 0 1 1 1 0 Minor tail protein T GSHPx PF00255.19 CTQ27582.1 - 9.5e-42 141.0 0.0 1.1e-41 140.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione peroxidase AhpC-TSA PF00578.21 CTQ27582.1 - 3.5e-05 23.7 0.0 4.6e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 CTQ27582.1 - 0.018 14.8 0.0 0.026 14.2 0.0 1.2 1 0 0 1 1 1 0 Redoxin LPAM_1 PF08139.12 CTQ27583.1 - 2.7 8.7 4.5 1.7 9.3 1.2 2.2 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site DUF444 PF04285.12 CTQ27584.1 - 5.9e-187 621.9 2.4 6.7e-187 621.7 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF444) HALZ PF02183.18 CTQ27584.1 - 0.038 14.2 1.4 17 5.7 1.5 2.6 2 0 0 2 2 2 0 Homeobox associated leucine zipper AAA_PrkA PF08298.11 CTQ27585.1 - 2.1e-179 596.0 0.0 2.9e-179 595.5 0.0 1.2 1 0 0 1 1 1 1 PrkA AAA domain PrkA PF06798.12 CTQ27585.1 - 1.4e-74 251.0 2.2 5.6e-74 249.0 2.5 1.8 2 0 0 2 2 2 1 PrkA serine protein kinase C-terminal domain AAA_16 PF13191.6 CTQ27585.1 - 4.1e-05 24.0 0.0 0.00012 22.5 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 CTQ27585.1 - 0.0012 18.8 0.3 0.016 15.2 0.1 2.7 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 CTQ27585.1 - 0.0093 16.2 0.0 0.048 13.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 CTQ27585.1 - 0.14 11.5 0.0 0.41 10.0 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Med31 PF05669.12 CTQ27585.1 - 1.1 9.4 6.8 0.46 10.5 0.9 2.7 1 1 1 2 2 2 0 SOH1 MipA PF06629.12 CTQ27586.1 - 1.6e-51 175.6 10.4 1.8e-51 175.4 10.4 1.0 1 0 0 1 1 1 1 MltA-interacting protein MipA OMP_b-brl PF13505.6 CTQ27586.1 - 0.00025 21.2 11.3 0.0021 18.2 11.3 2.0 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain Aldo_ket_red PF00248.21 CTQ27587.1 - 2.4e-57 194.4 0.1 6.2e-56 189.7 0.1 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Aldose_epim PF01263.20 CTQ27588.1 - 3.3e-43 148.1 0.1 4e-43 147.8 0.1 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase Gp_dh_C PF02800.20 CTQ27589.1 - 2.8e-73 244.7 0.0 4e-73 244.2 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 CTQ27589.1 - 3.1e-42 143.0 1.3 1.1e-41 141.3 0.4 2.1 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 CTQ27589.1 - 0.00026 21.1 1.4 0.0021 18.2 1.4 2.4 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 2-Hacid_dh_C PF02826.19 CTQ27589.1 - 0.028 13.8 0.1 0.067 12.5 0.1 1.6 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SelR PF01641.18 CTQ27590.1 - 2.4e-54 182.6 0.1 2.8e-54 182.4 0.1 1.0 1 0 0 1 1 1 1 SelR domain zf-B_box PF00643.24 CTQ27590.1 - 0.034 14.3 0.6 6.6 7.0 0.1 2.4 2 0 0 2 2 2 0 B-box zinc finger Yippee-Mis18 PF03226.14 CTQ27590.1 - 0.072 13.3 0.2 0.16 12.2 0.2 1.6 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF1315 PF07023.12 CTQ27591.1 - 2.3e-26 91.7 0.1 3e-26 91.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1315) Birna_RdRp PF04197.12 CTQ27591.1 - 0.06 11.7 0.0 0.071 11.4 0.0 1.0 1 0 0 1 1 1 0 Birnavirus RNA dependent RNA polymerase (VP1) HNH PF01844.23 CTQ27592.1 - 8e-12 45.1 8.3 1e-11 44.8 8.3 1.2 1 0 0 1 1 1 1 HNH endonuclease Ima1_N PF09779.9 CTQ27592.1 - 0.041 14.8 0.7 4.4 8.2 0.1 2.1 2 0 0 2 2 2 0 Ima1 N-terminal domain Endonuclease_7 PF02945.15 CTQ27592.1 - 1.9 8.4 6.7 3.8 7.5 6.7 1.5 1 1 0 1 1 1 0 Recombination endonuclease VII Glyco_hydro_18 PF00704.28 CTQ27593.1 - 2.3e-65 221.4 1.4 2.7e-65 221.2 1.4 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 Isochorismatase PF00857.20 CTQ27594.1 - 3.9e-34 118.4 0.0 4.7e-34 118.1 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family Asparaginase PF00710.20 CTQ27595.1 - 5.1e-65 218.6 0.0 7.7e-65 218.0 0.0 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 CTQ27595.1 - 3.1e-32 111.2 0.3 5.1e-32 110.5 0.3 1.4 1 0 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain WHIM1 PF15612.6 CTQ27595.1 - 0.049 13.2 0.0 0.11 12.0 0.0 1.6 1 0 0 1 1 1 0 WSTF, HB1, Itc1p, MBD9 motif 1 Peptidase_S49 PF01343.18 CTQ27596.1 - 5.3e-98 325.2 0.1 2.3e-51 173.8 0.0 2.3 2 0 0 2 2 2 2 Peptidase family S49 CLP_protease PF00574.23 CTQ27596.1 - 3.8e-07 30.2 0.2 8.7e-05 22.5 0.2 2.6 2 0 0 2 2 2 2 Clp protease SDH_sah PF01972.16 CTQ27596.1 - 0.00022 20.4 0.1 0.00045 19.3 0.1 1.4 1 0 0 1 1 1 1 Serine dehydrogenase proteinase ECH_1 PF00378.20 CTQ27596.1 - 0.0097 15.2 0.6 0.96 8.7 0.3 3.1 3 1 0 3 3 3 1 Enoyl-CoA hydratase/isomerase Nitroreductase PF00881.24 CTQ27597.1 - 6.7e-24 84.8 0.0 7.7e-24 84.6 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 CTQ27597.1 - 0.008 15.8 0.0 2.7 7.5 0.0 2.2 2 0 0 2 2 2 2 Putative TM nitroreductase PAP2 PF01569.21 CTQ27599.1 - 4e-15 55.8 0.0 6.8e-15 55.0 0.0 1.3 1 0 0 1 1 1 1 PAP2 superfamily RANK_CRD_2 PF18278.1 CTQ27599.1 - 0.23 11.6 0.4 0.63 10.2 0.1 1.8 2 0 0 2 2 2 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 AIRS_C PF02769.22 CTQ27600.1 - 1.9e-30 106.1 0.7 2.5e-30 105.7 0.7 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 CTQ27600.1 - 9.8e-19 67.8 0.7 9.8e-19 67.8 0.7 2.8 3 1 0 3 3 3 1 AIR synthase related protein, N-terminal domain Topoisom_bac PF01131.20 CTQ27601.1 - 2.8e-112 375.8 0.0 3.3e-112 375.5 0.0 1.0 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 CTQ27601.1 - 5.8e-17 61.8 0.0 1.2e-16 60.7 0.0 1.6 1 0 0 1 1 1 1 Toprim domain FYRC PF05965.14 CTQ27601.1 - 0.031 14.4 0.0 0.66 10.2 0.0 2.4 2 0 0 2 2 2 0 F/Y rich C-terminus Toprim_4 PF13662.6 CTQ27601.1 - 0.12 12.9 0.0 0.5 10.9 0.0 2.0 2 0 0 2 2 2 0 Toprim domain ADH_zinc_N PF00107.26 CTQ27602.1 - 6.5e-26 90.8 0.4 1.3e-25 89.8 0.4 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 CTQ27602.1 - 5.6e-24 85.7 0.0 9.7e-24 84.9 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 CTQ27602.1 - 6.2e-11 42.2 0.3 7.3e-10 38.7 0.4 2.2 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain adh_short PF00106.25 CTQ27602.1 - 0.012 15.1 0.1 0.022 14.2 0.1 1.4 1 0 0 1 1 1 0 short chain dehydrogenase ADH_N_2 PF16884.5 CTQ27602.1 - 0.17 11.8 0.0 0.48 10.3 0.0 1.7 2 0 0 2 2 2 0 N-terminal domain of oxidoreductase ELFV_dehydrog PF00208.21 CTQ27603.1 - 2.3e-87 292.8 2.2 2.8e-87 292.5 2.2 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 CTQ27603.1 - 1.2e-49 167.5 0.0 2.7e-49 166.4 0.0 1.6 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AlaDh_PNT_C PF01262.21 CTQ27603.1 - 0.0082 15.5 7.8 0.009 15.3 0.4 2.7 2 1 1 3 3 3 1 Alanine dehydrogenase/PNT, C-terminal domain XdhC_C PF13478.6 CTQ27603.1 - 0.028 14.9 0.3 3.2 8.3 0.1 2.9 3 0 0 3 3 3 0 XdhC Rossmann domain NAD_binding_7 PF13241.6 CTQ27603.1 - 0.051 14.0 0.1 0.089 13.2 0.1 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 CTQ27603.1 - 0.076 12.4 0.1 0.14 11.5 0.1 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUDIX PF00293.28 CTQ27604.1 - 3.8e-18 65.8 0.0 4.6e-18 65.5 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 CTQ27604.1 - 6.8e-12 45.4 0.6 8.2e-12 45.1 0.6 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.6 CTQ27604.1 - 0.068 12.7 0.0 0.085 12.4 0.0 1.1 1 0 0 1 1 1 0 Nucleotide hydrolase CDP-OH_P_transf PF01066.21 CTQ27605.1 - 1e-08 35.8 4.0 1e-08 35.8 4.0 2.4 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Rhodanese PF00581.20 CTQ27606.1 - 9.9e-29 100.0 0.0 3.2e-11 43.7 0.0 3.1 3 0 0 3 3 3 3 Rhodanese-like domain Ish1 PF10281.9 CTQ27606.1 - 0.0011 19.2 3.0 0.98 9.8 0.0 3.0 3 0 0 3 3 3 2 Putative stress-responsive nuclear envelope protein GYF_2 PF14237.6 CTQ27606.1 - 0.015 15.1 0.0 11 6.0 0.0 2.8 2 0 0 2 2 2 0 GYF domain 2 SAP PF02037.27 CTQ27606.1 - 0.051 13.3 0.0 3.4 7.5 0.0 2.4 2 0 0 2 2 2 0 SAP domain LEM PF03020.15 CTQ27606.1 - 0.19 11.3 0.0 3 7.5 0.0 2.5 2 0 0 2 2 2 0 LEM domain ABC_tran PF00005.27 CTQ27607.1 - 7.9e-28 97.7 0.0 9.5e-28 97.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ27607.1 - 1.5e-05 25.0 1.1 0.0025 17.7 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ27607.1 - 0.00061 19.5 0.0 0.001 18.7 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ27607.1 - 0.0018 18.2 0.0 0.0026 17.7 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 CTQ27607.1 - 0.0019 18.6 0.2 0.004 17.5 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 CTQ27607.1 - 0.0041 16.7 0.1 0.012 15.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 CTQ27607.1 - 0.028 14.9 0.0 0.041 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 CTQ27607.1 - 0.031 14.6 0.0 0.09 13.0 0.0 1.8 2 1 0 2 2 2 0 AAA domain SMC_N PF02463.19 CTQ27607.1 - 0.042 13.3 0.0 3.2 7.1 0.0 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_33 PF13671.6 CTQ27607.1 - 0.048 13.8 0.6 0.17 12.0 0.6 2.0 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 CTQ27607.1 - 0.075 13.3 0.2 0.56 10.5 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit NACHT PF05729.12 CTQ27607.1 - 0.09 12.7 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 NACHT domain BPD_transp_1 PF00528.22 CTQ27608.1 - 7.2e-13 48.7 30.5 4.4e-08 33.1 11.0 2.8 2 2 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component MotA_ExbB PF01618.16 CTQ27608.1 - 3.7 7.3 8.9 2.4 7.9 3.2 2.5 2 0 0 2 2 2 0 MotA/TolQ/ExbB proton channel family SBP_bac_8 PF13416.6 CTQ27609.1 - 3.4e-15 56.6 0.0 5.3e-15 56.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ27609.1 - 4.4e-05 23.6 0.2 0.00044 20.3 0.2 2.0 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein CMD PF02627.20 CTQ27610.1 - 1.6e-11 44.1 0.9 5.7e-11 42.3 0.0 2.0 2 0 0 2 2 2 1 Carboxymuconolactone decarboxylase family SNARE_assoc PF09335.11 CTQ27611.1 - 9.1e-24 84.2 8.8 9.1e-24 84.2 8.8 2.4 2 1 1 3 3 3 2 SNARE associated Golgi protein SNARE_assoc PF09335.11 CTQ27612.1 - 2.5e-25 89.3 6.8 2.5e-25 89.3 6.8 1.8 2 0 0 2 2 2 1 SNARE associated Golgi protein Exo_endo_phos PF03372.23 CTQ27613.1 - 8.2e-23 81.1 0.1 9.7e-23 80.9 0.1 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 CTQ27613.1 - 0.0056 16.5 0.0 0.6 10.0 0.0 2.3 2 0 0 2 2 2 2 Endonuclease-reverse transcriptase Aminotran_3 PF00202.21 CTQ27614.1 - 1.9e-124 415.4 0.0 2.3e-124 415.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 CTQ27614.1 - 4.1e-05 22.9 0.0 5.2e-05 22.6 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 CTQ27614.1 - 0.00028 19.9 0.0 0.00049 19.2 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V AstA PF04958.12 CTQ27615.1 - 2.9e-144 479.8 0.0 3.2e-144 479.6 0.0 1.0 1 0 0 1 1 1 1 Arginine N-succinyltransferase beta subunit Aldedh PF00171.22 CTQ27616.1 - 3.9e-114 381.7 0.0 4.7e-114 381.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family CHRD PF07452.12 CTQ27616.1 - 0.026 15.5 1.6 0.028 15.4 0.0 1.9 2 0 0 2 2 2 0 CHRD domain AstB PF04996.12 CTQ27617.1 - 1.7e-205 682.9 0.0 1.9e-205 682.7 0.0 1.0 1 0 0 1 1 1 1 Succinylarginine dihydrolase AstE_AspA PF04952.14 CTQ27618.1 - 1.3e-65 221.4 0.0 1.6e-65 221.1 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Peptidase_M14 PF00246.24 CTQ27618.1 - 0.16 11.7 0.5 0.86 9.3 0.1 2.0 2 0 0 2 2 2 0 Zinc carboxypeptidase LTXXQ PF07813.12 CTQ27619.1 - 2.4e-24 86.0 7.8 4.2e-24 85.3 7.8 1.4 1 0 0 1 1 1 1 LTXXQ motif family protein Metal_resist PF13801.6 CTQ27619.1 - 2.5e-12 47.1 7.7 5.3e-12 46.0 6.6 1.9 1 1 1 2 2 2 2 Heavy-metal resistance DUF2362 PF10154.9 CTQ27619.1 - 0.0024 16.9 1.3 0.0027 16.7 1.3 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2362) DUF4890 PF16231.5 CTQ27619.1 - 0.0029 18.1 6.6 0.0039 17.7 6.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4890) MlaC PF05494.12 CTQ27619.1 - 0.022 14.5 0.5 5.6 6.7 0.2 2.3 2 1 0 2 2 2 0 MlaC protein DUF2680 PF10925.8 CTQ27619.1 - 0.81 9.7 8.5 23 5.1 1.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2680) GIY-YIG PF01541.24 CTQ27620.1 - 0.023 15.0 0.0 0.053 13.8 0.0 1.7 1 1 0 1 1 1 0 GIY-YIG catalytic domain NAD_synthase PF02540.17 CTQ27621.1 - 2.9e-77 259.1 0.0 3.4e-77 258.8 0.0 1.0 1 0 0 1 1 1 1 NAD synthase SmpA_OmlA PF04355.13 CTQ27622.1 - 9.7e-11 41.3 0.2 1.2e-10 41.0 0.2 1.1 1 0 0 1 1 1 1 SmpA / OmlA family PTS_IIB PF02302.17 CTQ27623.1 - 8.7e-16 58.4 0.0 1.1e-15 58.0 0.0 1.2 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit PTS_EIIC PF02378.18 CTQ27624.1 - 2.2e-47 161.7 31.9 2.2e-47 161.7 31.9 1.5 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_IIA PF02255.16 CTQ27625.1 - 7.4e-33 112.5 5.8 8.5e-33 112.3 5.8 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIA subunit HTH_18 PF12833.7 CTQ27626.1 - 3.2e-19 69.0 0.1 8e-19 67.7 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ27626.1 - 5.6e-18 64.6 2.2 1.7e-10 40.7 0.3 2.7 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ27626.1 - 6.2e-09 35.4 0.5 1e-08 34.8 0.5 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 CTQ27626.1 - 7.4e-06 25.9 0.5 1.4e-05 25.0 0.5 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain AraC_binding_2 PF14525.6 CTQ27626.1 - 0.0015 18.3 0.0 0.002 17.8 0.0 1.2 1 0 0 1 1 1 1 AraC-binding-like domain Cupin_7 PF12973.7 CTQ27626.1 - 0.0043 16.9 0.2 0.0078 16.1 0.2 1.4 1 0 0 1 1 1 1 ChrR Cupin-like domain EutQ PF06249.12 CTQ27626.1 - 0.0059 16.4 0.0 0.01 15.6 0.0 1.3 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.12 CTQ27626.1 - 0.012 15.3 0.0 0.022 14.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF861) JmjC PF02373.22 CTQ27626.1 - 0.017 15.6 0.1 0.032 14.6 0.1 1.5 1 0 0 1 1 1 0 JmjC domain, hydroxylase Cupin_6 PF12852.7 CTQ27626.1 - 0.027 14.2 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 Cupin Gifsy-2 PF13856.6 CTQ27626.1 - 0.038 14.4 0.0 0.096 13.1 0.0 1.7 1 0 0 1 1 1 0 ATP-binding sugar transporter from pro-phage SAM_DrpA PF18255.1 CTQ27626.1 - 0.051 13.8 0.0 0.15 12.4 0.0 1.9 1 0 0 1 1 1 0 DNA processing protein A sterile alpha motif domain Lyx_isomer PF07385.12 CTQ27626.1 - 0.096 11.9 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 D-lyxose isomerase TRM13 PF05206.14 CTQ27626.1 - 0.14 11.7 0.0 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase TRM13 Glyco_hydro_4 PF02056.16 CTQ27627.1 - 1.3e-75 253.0 0.0 2.1e-75 252.3 0.0 1.4 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Glyco_hydro_4C PF11975.8 CTQ27627.1 - 7.3e-35 120.9 0.0 1.4e-34 120.1 0.0 1.4 2 0 0 2 2 2 1 Family 4 glycosyl hydrolase C-terminal domain Ldh_1_N PF00056.23 CTQ27627.1 - 0.022 14.9 0.1 0.073 13.2 0.0 1.8 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain YdjC PF04794.12 CTQ27628.1 - 3.3e-58 197.4 0.1 3.7e-58 197.3 0.1 1.0 1 0 0 1 1 1 1 YdjC-like protein Catalase PF00199.19 CTQ27629.1 - 7.2e-179 594.8 0.0 9.5e-179 594.4 0.0 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 CTQ27629.1 - 8.1e-18 64.4 0.0 1.7e-17 63.3 0.0 1.6 1 0 0 1 1 1 1 Catalase-related immune-responsive Catalase_C PF18011.1 CTQ27629.1 - 4.7e-15 55.5 0.0 7.1e-15 54.9 0.0 1.3 1 0 0 1 1 1 1 C-terminal domain found in long catalases DJ-1_PfpI PF01965.24 CTQ27629.1 - 0.014 15.2 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 DJ-1/PfpI family CedA PF10729.9 CTQ27630.1 - 1.2e-52 175.6 1.6 1.5e-52 175.4 1.6 1.1 1 0 0 1 1 1 1 Cell division activator CedA SDF PF00375.18 CTQ27631.1 - 7.6e-103 344.5 34.8 9.1e-103 344.3 34.8 1.1 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family Pox_A14 PF05767.12 CTQ27631.1 - 0.043 14.0 1.0 0.2 11.9 0.5 2.4 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 YdjM PF04307.14 CTQ27632.1 - 1.7e-33 115.3 5.9 2.2e-33 115.0 5.9 1.1 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF2227 PF09988.9 CTQ27632.1 - 0.011 15.6 2.5 0.76 9.6 0.6 2.4 1 1 1 2 2 2 0 Uncharacterized metal-binding protein (DUF2227) adh_short_C2 PF13561.6 CTQ27633.1 - 1e-56 192.1 0.2 1.3e-56 191.8 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27633.1 - 2.3e-56 190.4 0.4 3e-56 190.0 0.4 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ27633.1 - 2.3e-08 34.2 0.6 3.2e-08 33.7 0.6 1.2 1 0 0 1 1 1 1 KR domain HAD_2 PF13419.6 CTQ27634.1 - 4.5e-24 85.5 0.0 5.2e-24 85.3 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ27634.1 - 3.6e-17 63.4 0.0 9.4e-15 55.5 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ27634.1 - 1.4e-05 25.6 0.2 2.3e-05 24.9 0.2 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ27634.1 - 7.8e-05 22.7 0.0 0.00013 21.9 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like YniB PF14002.6 CTQ27635.1 - 8.1e-80 266.4 3.7 9.2e-80 266.2 3.7 1.0 1 0 0 1 1 1 1 YniB-like protein Molybdopterin PF00384.22 CTQ27635.1 - 0.062 12.2 0.0 0.081 11.9 0.0 1.1 1 0 0 1 1 1 0 Molybdopterin oxidoreductase RseC_MucC PF04246.12 CTQ27635.1 - 0.3 11.1 3.3 0.31 11.0 1.4 1.9 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF2207 PF09972.9 CTQ27635.1 - 1.3 7.7 5.5 0.67 8.7 1.0 1.9 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) 4HBT PF03061.22 CTQ27636.1 - 5.9e-20 71.4 0.2 8.7e-20 70.9 0.2 1.2 1 0 0 1 1 1 1 Thioesterase superfamily MaoC_dehydratas PF01575.19 CTQ27636.1 - 0.019 14.5 0.1 0.025 14.1 0.1 1.2 1 0 0 1 1 1 0 MaoC like domain PS-DH PF14765.6 CTQ27636.1 - 0.13 11.5 0.0 0.17 11.1 0.0 1.1 1 0 0 1 1 1 0 Polyketide synthase dehydratase TonB_dep_Rec PF00593.24 CTQ27637.1 - 2.2e-55 189.4 32.5 2.2e-55 189.4 32.5 1.7 2 0 0 2 2 2 1 TonB dependent receptor Plug PF07715.15 CTQ27637.1 - 7.8e-30 103.6 0.8 2.5e-29 102.0 0.8 2.0 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain IspA PF04279.15 CTQ27638.1 - 2.1e-72 243.0 21.6 2.4e-72 242.8 21.6 1.0 1 0 0 1 1 1 1 Intracellular septation protein A DUF202 PF02656.15 CTQ27638.1 - 0.018 15.5 0.7 0.018 15.5 0.7 3.6 2 1 0 3 3 3 0 Domain of unknown function (DUF202) TauE PF01925.19 CTQ27638.1 - 0.06 13.0 18.5 0.042 13.5 11.8 2.0 1 1 1 2 2 2 0 Sulfite exporter TauE/SafE MgtC PF02308.16 CTQ27638.1 - 0.11 12.8 3.2 0.42 11.0 3.1 2.0 1 1 0 1 1 1 0 MgtC family Wzy_C PF04932.15 CTQ27638.1 - 3.2 7.4 16.6 4.7e+03 -2.9 16.6 2.4 1 1 0 1 1 1 0 O-Antigen ligase DUF3619 PF12279.8 CTQ27638.1 - 5.6 7.3 5.2 4.9 7.5 0.2 2.6 1 1 1 3 3 3 0 Protein of unknown function (DUF3619) UPF0259 PF06790.11 CTQ27639.1 - 3.9e-97 324.9 15.8 4.3e-97 324.7 15.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0259) CxxCxxCC PF03692.15 CTQ27640.1 - 1.8e-11 44.6 2.8 2.6e-11 44.0 2.8 1.2 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain OmpW PF03922.14 CTQ27641.1 - 1.2e-70 237.3 0.1 1.4e-70 237.1 0.1 1.0 1 0 0 1 1 1 1 OmpW family OMP_b-brl PF13505.6 CTQ27641.1 - 9.9e-12 45.3 5.3 1.2e-11 45.0 5.3 1.1 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain OprF PF05736.11 CTQ27641.1 - 2.9e-05 23.9 0.0 7.5e-05 22.6 0.0 1.8 1 1 0 1 1 1 1 OprF membrane domain OMP_b-brl_2 PF13568.6 CTQ27641.1 - 0.0064 16.5 0.2 0.012 15.6 0.2 1.7 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain Opacity PF02462.15 CTQ27641.1 - 0.0099 16.0 0.1 0.032 14.3 0.0 1.7 1 1 0 2 2 2 1 Opacity family porin protein Autotransporter PF03797.19 CTQ27641.1 - 0.031 13.9 4.9 1.4 8.5 0.1 2.9 1 1 1 2 2 2 0 Autotransporter beta-domain Porin_5 PF16930.5 CTQ27641.1 - 0.08 11.4 0.1 0.11 10.9 0.1 1.2 1 0 0 1 1 1 0 Putative porin PKHD_C PF18331.1 CTQ27642.1 - 1.1e-19 70.2 0.9 2e-19 69.4 0.9 1.4 1 0 0 1 1 1 1 PKHD-type hydroxylase C-terminal domain 2OG-FeII_Oxy_3 PF13640.6 CTQ27642.1 - 3.3e-13 50.3 0.0 4.9e-13 49.8 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 CTQ27642.1 - 0.11 13.0 0.0 0.22 12.0 0.0 1.6 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily TonB_dep_Rec PF00593.24 CTQ27643.1 - 6.7e-54 184.5 45.2 6.7e-54 184.5 45.2 1.5 1 1 0 1 1 1 1 TonB dependent receptor Plug PF07715.15 CTQ27643.1 - 1.1e-18 67.8 5.6 1.2e-18 67.6 3.0 2.4 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain adh_short PF00106.25 CTQ27644.1 - 5.5e-21 74.9 0.0 6.7e-21 74.6 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ27644.1 - 1.3e-19 70.7 0.0 1.6e-19 70.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 CTQ27644.1 - 0.00047 19.7 0.0 0.00099 18.6 0.0 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family KR PF08659.10 CTQ27644.1 - 0.0058 16.6 0.0 0.0076 16.2 0.0 1.2 1 0 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 CTQ27644.1 - 0.074 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase THF_DHG_CYH_C PF02882.19 CTQ27644.1 - 0.14 11.5 0.0 5.6 6.2 0.0 2.1 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ADH_zinc_N PF00107.26 CTQ27646.1 - 0.00029 20.8 0.4 0.00054 19.9 0.3 1.5 1 1 0 1 1 1 1 Zinc-binding dehydrogenase DapB_N PF01113.20 CTQ27646.1 - 0.0034 17.5 0.0 0.006 16.7 0.0 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus MAF_flag10 PF01973.18 CTQ27646.1 - 0.043 13.5 0.0 0.067 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF115 MarR_2 PF12802.7 CTQ27648.1 - 2.8e-11 43.1 0.1 4.9e-11 42.3 0.1 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 CTQ27648.1 - 3.5e-09 36.4 0.0 5.5e-09 35.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 CTQ27648.1 - 7.7e-05 23.1 0.0 0.00014 22.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 CTQ27648.1 - 9.6e-05 22.2 0.0 0.00016 21.5 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 CTQ27648.1 - 0.00029 20.3 0.0 0.00084 18.9 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 CTQ27648.1 - 0.00068 19.6 0.1 0.0029 17.6 0.0 2.0 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain HTH_29 PF13551.6 CTQ27648.1 - 0.001 19.0 0.1 0.0024 17.8 0.0 1.6 2 0 0 2 2 1 1 Winged helix-turn helix Fe_dep_repress PF01325.19 CTQ27648.1 - 0.0017 18.5 0.0 0.0035 17.5 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_1 PF00126.27 CTQ27648.1 - 0.0021 18.0 0.0 0.0039 17.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_11 PF08279.12 CTQ27648.1 - 0.0021 17.9 0.0 0.0079 16.1 0.0 1.9 2 0 0 2 2 2 1 HTH domain Crp PF00325.20 CTQ27648.1 - 0.0026 17.4 0.0 0.0049 16.5 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family HTH_28 PF13518.6 CTQ27648.1 - 0.0031 17.6 0.1 0.0076 16.4 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 CTQ27648.1 - 0.0063 16.3 1.4 0.014 15.2 0.0 2.2 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_38 PF13936.6 CTQ27648.1 - 0.0098 15.6 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 CTQ27648.1 - 0.014 15.2 0.0 0.027 14.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_23 PF13384.6 CTQ27648.1 - 0.046 13.5 0.1 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 Homeodomain-like domain HTH_20 PF12840.7 CTQ27648.1 - 0.07 13.2 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_DeoR PF08220.12 CTQ27648.1 - 0.093 12.5 0.0 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_36 PF13730.6 CTQ27648.1 - 0.1 12.6 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Trp_syntA PF00290.20 CTQ27649.1 - 4.9e-99 330.4 0.0 5.6e-99 330.2 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 CTQ27649.1 - 0.023 14.1 0.0 0.052 13.0 0.0 1.5 2 0 0 2 2 2 0 Histidine biosynthesis protein PALP PF00291.25 CTQ27650.1 - 4e-49 167.6 0.4 4.7e-49 167.4 0.4 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Mic1 PF07035.12 CTQ27650.1 - 0.12 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 Colon cancer-associated protein Mic1-like IGPS PF00218.21 CTQ27651.1 - 1e-97 326.3 0.2 1.7e-97 325.6 0.0 1.4 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase PRAI PF00697.22 CTQ27651.1 - 7.4e-61 205.3 0.0 1.1e-60 204.7 0.0 1.3 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase QRPTase_C PF01729.19 CTQ27651.1 - 0.059 13.1 0.1 0.14 11.9 0.1 1.6 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain Glycos_transf_3 PF00591.21 CTQ27652.1 - 7.4e-101 337.0 0.2 1.2e-100 336.3 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain GATase PF00117.28 CTQ27652.1 - 4.9e-44 150.4 0.0 8.7e-44 149.6 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Glycos_trans_3N PF02885.17 CTQ27652.1 - 5.3e-17 61.4 0.6 3e-15 55.8 0.1 2.6 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain Peptidase_C26 PF07722.13 CTQ27652.1 - 4.1e-06 26.7 0.2 1.4e-05 25.0 0.2 1.9 1 1 0 1 1 1 1 Peptidase C26 Glyco_transf_4 PF13439.6 CTQ27652.1 - 0.061 13.3 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Phage_TAC_11 PF11836.8 CTQ27652.1 - 0.077 13.1 6.4 0.21 11.8 0.8 2.5 2 0 0 2 2 2 0 Phage tail tube protein, GTA-gp10 Chorismate_bind PF00425.18 CTQ27653.1 - 1.9e-83 280.0 0.0 2.8e-83 279.5 0.0 1.2 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 CTQ27653.1 - 9.1e-15 55.1 0.0 1.3e-13 51.3 0.0 2.6 2 1 0 2 2 2 1 Anthranilate synthase component I, N terminal region BPL_C PF02237.17 CTQ27653.1 - 0.11 12.4 0.0 0.36 10.8 0.1 1.8 2 0 0 2 2 2 0 Biotin protein ligase C terminal domain Lipase_GDSL_3 PF14606.6 CTQ27653.1 - 0.13 12.4 0.1 0.47 10.6 0.0 2.0 2 0 0 2 2 2 0 GDSL-like Lipase/Acylhydrolase family PHP PF02811.19 CTQ27654.1 - 3.1e-07 30.8 0.1 4.5e-07 30.3 0.1 1.3 1 1 0 1 1 1 1 PHP domain Sua5_yciO_yrdC PF01300.18 CTQ27655.1 - 2e-46 157.8 0.0 2.4e-46 157.5 0.0 1.1 1 0 0 1 1 1 1 Telomere recombination DUF3878 PF12994.7 CTQ27655.1 - 0.16 11.4 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function, E. rectale Gene description (DUF3878) EamA PF00892.20 CTQ27656.1 - 1.2e-27 96.8 31.9 1.6e-14 54.2 13.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF2070 PF09843.9 CTQ27656.1 - 1.5 7.1 6.3 0.16 10.2 0.9 1.8 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) NADH-u_ox-rdase PF10785.9 CTQ27656.1 - 2.2 9.1 4.9 1.4 9.7 1.5 2.5 2 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit LysR_substrate PF03466.20 CTQ27657.1 - 1.2e-40 139.1 3.0 2.2e-40 138.3 3.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27657.1 - 1.4e-19 69.8 2.0 1.7e-19 69.5 0.8 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ27657.1 - 0.069 13.0 0.1 0.18 11.6 0.1 1.7 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain MarR_2 PF12802.7 CTQ27657.1 - 0.094 12.6 0.2 0.31 11.0 0.2 1.9 1 0 0 1 1 1 0 MarR family HemX PF04375.14 CTQ27658.1 - 0.023 14.0 0.1 0.024 14.0 0.1 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase PAAR_motif PF05488.13 CTQ27660.1 - 0.0019 18.3 1.0 0.014 15.6 1.6 2.1 1 1 1 2 2 2 1 PAAR motif PAAR_motif PF05488.13 CTQ27661.1 - 4.1e-12 46.1 1.0 5.6e-12 45.6 1.0 1.2 1 0 0 1 1 1 1 PAAR motif PseudoU_synth_2 PF00849.22 CTQ27663.1 - 2e-16 60.5 0.0 6.2e-16 58.9 0.0 1.8 2 1 0 2 2 2 1 RNA pseudouridylate synthase S4 PF01479.25 CTQ27663.1 - 8.2e-11 41.4 0.3 2.4e-10 39.9 0.3 1.9 1 0 0 1 1 1 1 S4 domain CobA_CobO_BtuR PF02572.15 CTQ27664.1 - 1.1e-59 201.5 0.0 1.4e-59 201.2 0.0 1.1 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Co_AT_N PF12557.8 CTQ27664.1 - 3.2e-06 26.9 4.7 3.2e-06 26.9 4.7 1.9 2 0 0 2 2 2 1 Cob(I)alamin adenosyltransferase N terminal Smr PF01713.21 CTQ27664.1 - 0.034 14.5 0.1 2.1 8.8 0.0 2.3 2 0 0 2 2 2 0 Smr domain IstB_IS21 PF01695.17 CTQ27664.1 - 0.046 13.5 0.2 8.8 6.0 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein Phosphonate-bd PF12974.7 CTQ27664.1 - 0.066 12.8 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein ResIII PF04851.15 CTQ27664.1 - 0.25 11.3 0.4 0.52 10.3 0.2 1.6 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit adh_short PF00106.25 CTQ27665.1 - 1.1e-51 175.1 0.0 1.2e-51 174.9 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ27665.1 - 1.9e-39 135.6 0.0 4.2e-39 134.5 0.0 1.5 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ27665.1 - 1.3e-14 54.6 0.0 1.7e-14 54.2 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ27665.1 - 0.00095 18.7 0.0 0.0048 16.4 0.0 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 CTQ27665.1 - 0.0035 16.8 0.0 0.004 16.5 0.0 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) Polysacc_synt_2 PF02719.15 CTQ27665.1 - 0.0064 15.7 0.0 0.0081 15.3 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Peptidase_S49_N PF08496.10 CTQ27666.1 - 4.7e-59 198.9 2.7 9.2e-59 197.9 2.7 1.5 1 0 0 1 1 1 1 Peptidase family S49 N-terminal Peptidase_S49 PF01343.18 CTQ27666.1 - 3.2e-43 147.3 0.0 5.7e-43 146.5 0.0 1.4 1 0 0 1 1 1 1 Peptidase family S49 SDH_sah PF01972.16 CTQ27666.1 - 0.00018 20.6 0.2 0.00031 19.8 0.2 1.4 1 0 0 1 1 1 1 Serine dehydrogenase proteinase DAG1 PF05454.11 CTQ27666.1 - 0.044 13.2 0.1 0.083 12.3 0.1 1.4 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) HemX PF04375.14 CTQ27666.1 - 0.089 12.1 4.4 0.15 11.3 4.4 1.3 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase UPF0239 PF06783.11 CTQ27666.1 - 0.094 12.9 2.6 0.25 11.6 2.6 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0239) RRP14 PF15459.6 CTQ27666.1 - 0.15 12.7 7.2 0.3 11.7 7.2 1.5 1 0 0 1 1 1 0 60S ribosome biogenesis protein Rrp14 DUF2498 PF10692.9 CTQ27667.1 - 1.2e-42 143.7 0.1 1.3e-42 143.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2498) Aldedh PF00171.22 CTQ27667.1 - 0.019 13.5 0.0 0.023 13.2 0.0 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family Topoisom_bac PF01131.20 CTQ27668.1 - 4.6e-128 427.7 0.4 4.6e-128 427.7 0.4 1.6 2 0 0 2 2 2 1 DNA topoisomerase Topo_Zn_Ribbon PF08272.11 CTQ27668.1 - 8.6e-38 127.7 0.2 2e-22 78.6 2.1 2.5 2 0 0 2 2 2 2 Topoisomerase I zinc-ribbon-like Toprim PF01751.22 CTQ27668.1 - 1.7e-34 118.1 0.0 4.2e-34 116.9 0.0 1.7 1 0 0 1 1 1 1 Toprim domain zf-C4_Topoisom PF01396.19 CTQ27668.1 - 7.4e-18 64.1 18.0 2.7e-11 43.1 2.4 4.5 4 1 0 4 4 4 2 Topoisomerase DNA binding C4 zinc finger Toprim_4 PF13662.6 CTQ27668.1 - 0.018 15.5 0.1 0.26 11.8 0.0 2.9 3 0 0 3 3 3 0 Toprim domain DUF2399 PF09664.10 CTQ27668.1 - 0.058 13.3 0.2 0.8 9.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function C-terminus (DUF2399) Toprim_2 PF13155.6 CTQ27668.1 - 0.13 12.8 0.0 0.53 10.7 0.0 2.1 1 0 0 1 1 1 0 Toprim-like Zn_ribbon_recom PF13408.6 CTQ27668.1 - 0.17 12.5 10.7 0.64 10.6 0.0 3.6 3 0 0 3 3 3 0 Recombinase zinc beta ribbon domain DUF1722 PF08349.11 CTQ27668.1 - 0.17 12.2 0.5 0.84 9.9 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1722) OrfB_Zn_ribbon PF07282.11 CTQ27668.1 - 0.3 11.0 6.4 1.9 8.5 0.0 3.4 3 0 0 3 3 3 0 Putative transposase DNA-binding domain DZR PF12773.7 CTQ27668.1 - 1.2 9.2 6.7 54 3.9 6.5 2.7 1 1 1 2 2 2 0 Double zinc ribbon YhfH PF14149.6 CTQ27668.1 - 2.7 8.1 6.8 51 4.0 0.4 3.5 3 0 0 3 3 3 0 YhfH-like protein zinc_ribbon_2 PF13240.6 CTQ27668.1 - 9.8 6.1 7.3 73 3.3 0.1 3.5 3 0 0 3 3 3 0 zinc-ribbon domain LysR_substrate PF03466.20 CTQ27669.1 - 2.8e-40 137.9 0.0 3.7e-40 137.5 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27669.1 - 3.5e-15 55.7 0.0 6.5e-15 54.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Aconitase PF00330.20 CTQ27671.1 - 2.3e-184 613.7 0.0 3e-184 613.4 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 CTQ27671.1 - 2.1e-49 167.2 0.0 3.5e-49 166.5 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain GTP_cyclohydro2 PF00925.20 CTQ27672.1 - 1.1e-67 226.7 0.0 1.3e-67 226.5 0.0 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase II PAP2 PF01569.21 CTQ27673.1 - 8e-30 103.4 5.3 8e-30 103.4 5.3 2.0 1 1 1 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 CTQ27673.1 - 1e-06 28.6 13.0 1e-06 28.6 13.0 1.9 1 1 0 1 1 1 1 PAP2 superfamily Halogen_Hydrol PF10112.9 CTQ27673.1 - 0.17 11.8 0.2 10 6.1 0.0 2.2 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PAP2_C PF14360.6 CTQ27673.1 - 5 7.7 10.5 0.084 13.4 1.6 2.3 2 1 0 2 2 2 0 PAP2 superfamily C-terminal LapA_dom PF06305.11 CTQ27674.1 - 9e-21 73.5 0.9 9e-21 73.5 0.9 1.9 2 0 0 2 2 2 1 Lipopolysaccharide assembly protein A domain DUF2304 PF10066.9 CTQ27674.1 - 0.0093 16.2 3.0 0.44 10.8 0.0 2.2 1 1 0 2 2 2 2 Uncharacterized conserved protein (DUF2304) DUF4148 PF13663.6 CTQ27674.1 - 0.0097 16.1 0.3 2.3 8.5 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4148) Yip1 PF04893.17 CTQ27674.1 - 0.03 14.1 6.3 0.034 13.9 6.3 1.1 1 0 0 1 1 1 0 Yip1 domain DUF948 PF06103.11 CTQ27674.1 - 0.054 13.8 0.8 0.17 12.2 0.0 1.9 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) TPR_14 PF13428.6 CTQ27675.1 - 1.9e-15 56.2 19.9 0.029 15.2 0.9 7.8 6 2 2 8 8 7 6 Tetratricopeptide repeat TPR_2 PF07719.17 CTQ27675.1 - 1.5e-13 49.7 4.5 0.0072 16.4 0.0 6.6 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 CTQ27675.1 - 2.8e-13 50.1 12.5 2.2e-06 28.1 0.3 4.8 2 2 2 5 5 5 4 Tetratricopeptide repeat Rubredoxin_2 PF18073.1 CTQ27675.1 - 4.1e-13 48.8 5.9 6.7e-13 48.1 5.9 1.4 1 0 0 1 1 1 1 Rubredoxin metal binding domain TPR_7 PF13176.6 CTQ27675.1 - 1.6e-12 46.5 13.3 0.0058 16.6 0.0 7.1 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_8 PF13181.6 CTQ27675.1 - 7.9e-12 44.4 2.2 0.072 13.3 0.0 6.9 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_16 PF13432.6 CTQ27675.1 - 4.4e-11 43.2 7.1 0.25 12.0 1.5 5.4 4 1 0 5 5 5 3 Tetratricopeptide repeat TPR_1 PF00515.28 CTQ27675.1 - 1.5e-10 40.4 2.0 0.15 11.9 0.0 6.1 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 CTQ27675.1 - 1.5e-08 34.8 16.1 0.00023 21.4 0.4 5.3 3 1 3 6 6 6 4 Tetratricopeptide repeat ANAPC3 PF12895.7 CTQ27675.1 - 8.2e-08 32.4 1.0 0.0017 18.5 0.0 4.6 1 1 4 5 5 5 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 CTQ27675.1 - 2.1e-06 28.0 15.5 0.12 13.1 0.0 7.4 8 0 0 8 8 7 1 Tetratricopeptide repeat TPR_9 PF13371.6 CTQ27675.1 - 2.8e-05 24.2 3.2 0.16 12.1 1.3 4.0 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_4 PF07721.14 CTQ27675.1 - 6.3e-05 23.2 0.4 19 6.2 0.1 5.0 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_11 PF13414.6 CTQ27675.1 - 0.00011 21.8 0.0 0.17 11.6 0.0 3.9 3 0 0 3 3 3 1 TPR repeat TPR_17 PF13431.6 CTQ27675.1 - 0.00023 21.3 0.2 15 6.3 0.0 4.5 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_21 PF09976.9 CTQ27675.1 - 0.00024 20.8 13.3 0.0053 16.5 2.1 3.1 1 1 1 3 3 3 2 Tetratricopeptide repeat-like domain TPR_10 PF13374.6 CTQ27675.1 - 0.00059 19.6 8.4 11 6.1 0.1 6.3 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_20 PF14561.6 CTQ27675.1 - 0.0017 18.6 14.9 0.56 10.6 0.1 5.3 3 2 2 5 5 5 2 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 CTQ27675.1 - 0.0019 17.8 4.0 0.0071 16.0 2.4 2.4 2 0 0 2 2 2 1 Bacterial type III secretion protein (HrpB1_HrpK) T4SS_TraI PF16932.5 CTQ27675.1 - 0.0093 15.2 0.0 0.018 14.2 0.0 1.4 1 0 0 1 1 1 1 Type IV secretory system, conjugal DNA-protein transfer RIP PF00161.19 CTQ27675.1 - 0.011 15.3 0.1 0.074 12.6 0.0 2.1 2 0 0 2 2 2 0 Ribosome inactivating protein Rapsyn_N PF10579.9 CTQ27675.1 - 0.019 15.0 0.6 2.3 8.4 0.0 4.0 4 1 1 5 5 5 0 Rapsyn N-terminal myristoylation and linker region PPR PF01535.20 CTQ27675.1 - 0.032 14.5 4.9 14 6.2 0.1 5.2 5 0 0 5 5 5 0 PPR repeat Leuk-A4-hydro_C PF09127.11 CTQ27675.1 - 0.097 12.8 1.2 5.7 7.1 0.1 3.1 2 2 1 3 3 3 0 Leukotriene A4 hydrolase, C-terminal zinc_ribbon_15 PF17032.5 CTQ27675.1 - 0.1 13.4 0.2 0.18 12.6 0.2 1.4 1 0 0 1 1 1 0 zinc-ribbon family SPG48 PF14764.6 CTQ27675.1 - 0.14 12.7 0.1 0.46 11.0 0.0 2.0 2 0 0 2 2 2 0 AP-5 complex subunit, vesicle trafficking Zn_Tnp_IS1 PF03811.13 CTQ27675.1 - 0.23 11.2 1.9 13 5.7 0.1 2.4 2 0 0 2 2 2 0 InsA N-terminal domain zf-CCHC_3 PF13917.6 CTQ27675.1 - 0.34 10.9 3.6 0.95 9.5 3.6 1.7 1 0 0 1 1 1 0 Zinc knuckle Zn-ribbon_8 PF09723.10 CTQ27675.1 - 0.74 10.0 2.6 1.8 8.7 2.6 1.7 1 1 0 1 1 1 0 Zinc ribbon domain OMPdecase PF00215.24 CTQ27676.1 - 2e-51 174.8 0.0 2.2e-51 174.6 0.0 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family AP_endonuc_2 PF01261.24 CTQ27676.1 - 0.11 11.9 0.8 0.71 9.3 0.2 2.7 2 1 0 2 2 2 0 Xylose isomerase-like TIM barrel SUI1 PF01253.22 CTQ27677.1 - 1e-17 64.4 0.3 1.3e-17 64.1 0.3 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DUF2019 PF09450.10 CTQ27677.1 - 0.096 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2019) Gly-zipper_Omp PF13488.6 CTQ27678.1 - 2.5e-07 30.6 13.5 4e-07 29.9 13.5 1.4 1 0 0 1 1 1 1 Glycine zipper Rick_17kDa_Anti PF05433.15 CTQ27678.1 - 3.7e-07 29.9 22.6 5.2e-07 29.4 22.6 1.2 1 0 0 1 1 1 1 Glycine zipper 2TM domain Gly-zipper_YMGG PF13441.6 CTQ27678.1 - 0.0017 18.0 23.8 0.0076 16.0 23.8 1.9 1 1 0 1 1 1 1 YMGG-like Gly-zipper DUF4337 PF14235.6 CTQ27678.1 - 0.12 12.4 0.6 0.14 12.2 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Gly-zipper_OmpA PF13436.6 CTQ27678.1 - 0.32 10.8 24.5 2.2 8.1 24.6 2.0 1 1 0 1 1 1 0 Glycine-zipper domain DUF2892 PF11127.8 CTQ27678.1 - 0.94 9.6 5.8 0.2 11.7 1.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) TraT PF05818.12 CTQ27678.1 - 1.3 8.7 6.8 1.4 8.5 6.8 1.1 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein DeoRC PF00455.22 CTQ27679.1 - 1.8e-41 141.8 0.0 3.7e-41 140.7 0.0 1.5 2 0 0 2 2 2 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ27679.1 - 2.3e-14 52.9 0.2 4.5e-14 51.9 0.2 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ27679.1 - 2.4e-09 37.0 0.4 2.2e-07 30.7 0.1 2.3 2 0 0 2 2 2 1 HTH domain HTH_Mga PF08280.11 CTQ27679.1 - 7.1e-07 29.2 0.0 2.8e-06 27.3 0.0 1.9 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_24 PF13412.6 CTQ27679.1 - 1.1e-05 24.8 0.6 0.0002 20.8 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 CTQ27679.1 - 0.00031 20.5 0.0 0.00066 19.5 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain GntR PF00392.21 CTQ27679.1 - 0.0021 17.6 0.1 0.0047 16.6 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_5 PF01022.20 CTQ27679.1 - 0.0024 17.7 0.0 0.0051 16.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 CTQ27679.1 - 0.003 17.5 0.9 0.049 13.6 0.1 2.3 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 CTQ27679.1 - 0.003 17.4 0.1 0.016 15.1 0.0 2.0 2 0 0 2 2 2 1 MarR family Put_DNA-bind_N PF06971.13 CTQ27679.1 - 0.0032 17.5 0.1 0.0078 16.2 0.1 1.7 1 0 0 1 1 1 1 Putative DNA-binding protein N-terminus HTH_36 PF13730.6 CTQ27679.1 - 0.0049 16.8 0.1 0.065 13.2 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ27679.1 - 0.009 16.0 0.3 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 CTQ27679.1 - 0.019 14.5 0.1 0.045 13.3 0.0 1.7 2 0 0 2 2 1 0 Sigma-70, region 4 FaeA PF04703.12 CTQ27679.1 - 0.024 15.0 0.2 0.076 13.4 0.0 1.8 2 0 0 2 2 2 0 FaeA-like protein Rrf2 PF02082.20 CTQ27679.1 - 0.03 14.7 0.1 0.086 13.2 0.0 1.8 2 0 0 2 2 1 0 Transcriptional regulator Sigma70_r4_2 PF08281.12 CTQ27679.1 - 0.035 13.8 0.1 0.29 10.8 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 MerR PF00376.23 CTQ27679.1 - 0.06 13.1 0.3 0.18 11.6 0.1 1.9 2 0 0 2 2 2 0 MerR family regulatory protein HTH_IclR PF09339.10 CTQ27679.1 - 0.07 12.9 0.1 0.17 11.7 0.1 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 CTQ27679.1 - 0.07 12.6 0.1 0.27 10.7 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_29 PF13551.6 CTQ27679.1 - 0.081 13.0 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix CENP-B_N PF04218.13 CTQ27679.1 - 0.085 12.5 0.0 0.23 11.1 0.0 1.7 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain RepL PF05732.11 CTQ27679.1 - 0.11 11.9 0.0 0.64 9.4 0.0 2.0 2 0 0 2 2 2 0 Firmicute plasmid replication protein (RepL) HTH_3 PF01381.22 CTQ27679.1 - 0.13 12.3 0.2 1.3 9.1 0.0 2.4 2 1 0 2 2 2 0 Helix-turn-helix HTH_10 PF04967.12 CTQ27679.1 - 0.15 11.9 0.2 0.38 10.6 0.0 1.8 2 0 0 2 2 2 0 HTH DNA binding domain RNB PF00773.19 CTQ27681.1 - 1e-83 281.4 0.0 1.3e-83 281.1 0.0 1.1 1 0 0 1 1 1 1 RNB domain OB_RNB PF08206.11 CTQ27681.1 - 3.6e-19 68.2 0.0 8.1e-19 67.1 0.0 1.7 1 0 0 1 1 1 1 Ribonuclease B OB domain S1 PF00575.23 CTQ27681.1 - 6.3e-12 45.7 3.0 3.3e-10 40.2 0.7 2.4 2 0 0 2 2 2 2 S1 RNA binding domain CSD2 PF17876.1 CTQ27681.1 - 6.9e-12 45.4 0.0 1.8e-08 34.4 0.0 2.7 2 0 0 2 2 2 2 Cold shock domain PilZ PF07238.14 CTQ27681.1 - 0.025 14.9 0.0 0.13 12.6 0.0 2.2 2 0 0 2 2 2 0 PilZ domain adh_short_C2 PF13561.6 CTQ27683.1 - 4.6e-85 284.9 0.4 5.1e-85 284.7 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27683.1 - 6.8e-15 55.0 0.0 8.5e-15 54.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ27683.1 - 0.013 15.4 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 KR domain HutD PF05962.11 CTQ27684.1 - 8.3e-44 149.7 0.0 9.3e-44 149.6 0.0 1.0 1 0 0 1 1 1 1 HutD DUF1005 PF06219.12 CTQ27684.1 - 0.21 10.6 0.3 0.25 10.3 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1005) Transp_cyt_pur PF02133.15 CTQ27685.1 - 1.8e-53 181.9 42.0 4.4e-53 180.6 42.0 1.5 1 1 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin ABC_tran PF00005.27 CTQ27686.1 - 2.1e-32 112.5 0.0 3.2e-32 111.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 CTQ27686.1 - 5.3e-06 26.7 0.1 3.2e-05 24.2 0.1 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ27686.1 - 2.4e-05 23.9 0.5 0.00049 19.6 0.5 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ27686.1 - 0.00013 21.9 0.1 0.00064 19.7 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_15 PF13175.6 CTQ27686.1 - 0.00036 20.4 0.0 0.00039 20.2 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ27686.1 - 0.00093 18.9 0.0 0.0019 17.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 CTQ27686.1 - 0.0026 17.6 0.0 0.0065 16.3 0.0 1.7 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF87 PF01935.17 CTQ27686.1 - 0.0027 17.8 0.0 0.0043 17.2 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain IstB_IS21 PF01695.17 CTQ27686.1 - 0.0027 17.4 0.1 0.038 13.7 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein DUF3652 PF12372.8 CTQ27686.1 - 0.0031 17.4 0.2 0.0057 16.5 0.2 1.4 1 0 0 1 1 1 1 Huntingtin protein region AAA_23 PF13476.6 CTQ27686.1 - 0.0068 16.9 0.1 0.014 15.9 0.1 1.5 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 CTQ27686.1 - 0.016 15.1 0.1 0.036 14.0 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 CTQ27686.1 - 0.025 14.3 0.0 0.074 12.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 CTQ27686.1 - 0.027 13.3 0.3 0.65 8.7 0.1 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class DUF2847 PF11009.8 CTQ27686.1 - 0.028 14.3 0.0 0.05 13.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2847) AAA PF00004.29 CTQ27686.1 - 0.028 14.8 0.0 0.36 11.3 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CTQ27686.1 - 0.028 14.8 0.0 0.046 14.1 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 CTQ27686.1 - 0.044 14.0 0.0 0.084 13.0 0.0 1.6 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 CTQ27686.1 - 0.052 13.9 0.2 0.16 12.3 0.1 2.0 2 1 0 2 2 2 0 RNA helicase G-alpha PF00503.20 CTQ27686.1 - 0.052 12.7 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_13 PF13166.6 CTQ27686.1 - 0.061 12.0 0.0 0.3 9.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 CTQ27686.1 - 0.082 11.8 0.0 0.11 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain Mg_chelatase PF01078.21 CTQ27686.1 - 0.12 11.8 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RDV-p3 PF09231.10 CTQ27686.1 - 0.13 10.0 0.0 0.21 9.3 0.0 1.3 1 0 0 1 1 1 0 Rice dwarf virus p3 MMR_HSR1 PF01926.23 CTQ27686.1 - 0.14 12.2 0.1 0.27 11.3 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase ABC_tran PF00005.27 CTQ27687.1 - 8.9e-30 104.0 0.0 4.9e-28 98.3 0.0 2.1 2 0 0 2 2 2 1 ABC transporter oligo_HPY PF08352.12 CTQ27687.1 - 1.7e-17 63.7 0.0 4.6e-17 62.3 0.1 1.7 2 0 0 2 2 2 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 CTQ27687.1 - 1.9e-07 31.2 1.9 8e-06 25.9 0.2 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ27687.1 - 0.00026 20.5 0.0 0.00071 19.1 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 CTQ27687.1 - 0.0048 17.3 0.1 0.2 12.1 0.0 2.4 2 1 1 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CTQ27687.1 - 0.0085 16.4 0.1 2.5 8.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 CTQ27687.1 - 0.014 15.9 0.0 3.8 8.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 CTQ27687.1 - 0.028 14.8 0.1 0.11 12.9 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 CTQ27687.1 - 0.096 12.7 0.0 0.25 11.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 CTQ27687.1 - 0.18 11.6 0.1 0.36 10.6 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain BPD_transp_1 PF00528.22 CTQ27688.1 - 2.1e-19 70.0 13.8 2.1e-19 70.0 13.8 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ27688.1 - 1.6e-09 37.6 0.0 1.6e-09 37.6 0.0 3.4 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C Chal_sti_synt_N PF00195.19 CTQ27688.1 - 0.066 12.6 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain BPD_transp_1 PF00528.22 CTQ27689.1 - 1.4e-43 148.8 13.1 1.4e-43 148.8 13.1 2.1 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 CTQ27690.1 - 8.3e-83 278.4 0.0 9.7e-83 278.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle HTH_ABP1_N PF18107.1 CTQ27690.1 - 0.031 14.0 0.1 0.072 12.8 0.1 1.6 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain Epimerase PF01370.21 CTQ27691.1 - 1.4e-17 63.9 0.0 2.2e-17 63.3 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 CTQ27691.1 - 2.3e-12 47.2 2.6 2.9e-12 46.8 0.4 2.2 3 1 0 3 3 3 1 NAD(P)H-binding NmrA PF05368.13 CTQ27691.1 - 2e-06 27.5 0.1 3.5e-06 26.8 0.1 1.4 1 0 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 CTQ27691.1 - 3.4e-06 26.4 0.1 7.7e-06 25.2 0.1 1.5 1 1 0 1 1 1 1 RmlD substrate binding domain TrkA_N PF02254.18 CTQ27691.1 - 8.5e-05 22.8 0.0 0.00022 21.5 0.0 1.6 2 0 0 2 2 2 1 TrkA-N domain GDP_Man_Dehyd PF16363.5 CTQ27691.1 - 0.0013 18.3 0.0 0.012 15.1 0.0 2.1 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 CTQ27691.1 - 0.0056 15.7 0.0 0.01 14.9 0.0 1.4 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family ApbA PF02558.16 CTQ27691.1 - 0.006 16.2 0.3 0.014 15.1 0.1 1.7 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_4 PF07993.12 CTQ27691.1 - 0.0091 15.2 0.0 0.017 14.3 0.0 1.5 1 0 0 1 1 1 1 Male sterility protein adh_short PF00106.25 CTQ27691.1 - 0.049 13.1 0.1 0.08 12.4 0.1 1.3 1 0 0 1 1 1 0 short chain dehydrogenase DapB_N PF01113.20 CTQ27691.1 - 0.17 12.0 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus MLTR_LBD PF17765.1 CTQ27692.1 - 4.7e-44 150.5 0.9 4.7e-44 150.5 0.9 1.6 2 0 0 2 2 2 1 MmyB-like transcription regulator ligand binding domain HTH_31 PF13560.6 CTQ27692.1 - 2.3e-20 72.7 5.5 6e-20 71.4 5.5 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ27692.1 - 0.002 18.1 0.0 0.0052 16.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_18 PF12833.7 CTQ27693.1 - 7.4e-21 74.2 2.3 1.7e-20 73.0 2.3 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ27693.1 - 9.3e-15 54.3 0.2 1.9e-06 27.8 0.1 2.7 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Gln-synt_C PF00120.24 CTQ27693.1 - 0.19 10.7 0.0 0.34 9.9 0.0 1.4 1 0 0 1 1 1 0 Glutamine synthetase, catalytic domain Peptidase_M20 PF01546.28 CTQ27695.1 - 3.7e-32 111.7 0.3 4.9e-32 111.3 0.3 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ27695.1 - 9e-13 48.1 0.3 1.9e-12 47.0 0.3 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain MFS_1 PF07690.16 CTQ27696.1 - 5.5e-41 140.7 65.1 3.7e-27 95.2 34.3 2.4 1 1 0 2 2 2 2 Major Facilitator Superfamily Sigma54_activat PF00158.26 CTQ27697.1 - 4.5e-62 208.7 0.0 6.6e-62 208.1 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 CTQ27697.1 - 8.3e-21 74.5 0.0 3.7e-20 72.4 0.0 2.0 2 1 0 2 2 2 1 Sigma-54 interaction domain HTH_8 PF02954.19 CTQ27697.1 - 1.8e-07 30.8 2.2 1.1e-06 28.3 2.8 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 CTQ27697.1 - 8.8e-07 29.0 0.0 1.4e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 CTQ27697.1 - 1.2e-06 28.0 0.0 0.0014 18.0 0.0 2.2 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA PF00004.29 CTQ27697.1 - 0.0023 18.4 0.0 0.0045 17.4 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 CTQ27697.1 - 0.0033 17.5 0.0 0.0065 16.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) HTH_23 PF13384.6 CTQ27697.1 - 0.034 14.0 0.1 0.5 10.2 0.1 2.4 2 0 0 2 2 2 0 Homeodomain-like domain AAA_16 PF13191.6 CTQ27697.1 - 0.034 14.5 0.2 0.07 13.5 0.0 1.8 2 1 0 2 2 2 0 AAA ATPase domain AAA_7 PF12775.7 CTQ27697.1 - 0.16 11.5 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region PspA_IM30 PF04012.12 CTQ27698.1 - 8.7e-49 166.1 36.6 1e-48 165.9 36.6 1.0 1 0 0 1 1 1 1 PspA/IM30 family DUF1664 PF07889.12 CTQ27698.1 - 0.53 10.3 17.0 0.08 13.0 2.0 3.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) rRNA_proc-arch PF13234.6 CTQ27698.1 - 2.3 8.0 14.1 0.13 12.2 1.1 2.3 1 1 1 2 2 2 0 rRNA-processing arch domain PspB PF06667.12 CTQ27699.1 - 9.8e-31 105.6 0.3 1.1e-30 105.5 0.3 1.0 1 0 0 1 1 1 1 Phage shock protein B P22_AR_C PF10548.9 CTQ27699.1 - 0.068 13.3 2.1 0.09 13.0 0.0 1.9 1 1 1 2 2 2 0 P22AR C-terminal domain BatA PF07584.11 CTQ27699.1 - 0.4 11.1 5.0 0.52 10.7 5.0 1.4 1 1 0 1 1 1 0 Aerotolerance regulator N-terminal PspC PF04024.12 CTQ27700.1 - 2.1e-14 53.1 1.4 3.1e-14 52.5 1.4 1.2 1 0 0 1 1 1 1 PspC domain FixQ PF05545.11 CTQ27700.1 - 0.44 10.5 5.0 0.67 10.0 5.0 1.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Phageshock_PspD PF09584.10 CTQ27701.1 - 1.6e-35 120.9 5.2 1.9e-35 120.7 5.2 1.0 1 0 0 1 1 1 1 Phage shock protein PspD (Phageshock_PspD) DUF463 PF04317.12 CTQ27702.1 - 1e-185 617.9 0.0 1.1e-185 617.8 0.0 1.0 1 0 0 1 1 1 1 YcjX-like family, DUF463 Chlorophyllase PF07224.11 CTQ27702.1 - 0.15 11.0 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase AAA_22 PF13401.6 CTQ27702.1 - 0.19 12.0 0.1 4.2 7.6 0.0 2.7 3 0 0 3 3 3 0 AAA domain DUF697 PF05128.12 CTQ27703.1 - 9.5e-54 181.5 2.5 1.3e-53 181.1 0.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF697) EcsC PF12787.7 CTQ27703.1 - 0.019 14.6 0.2 0.037 13.7 0.1 1.5 1 1 0 1 1 1 0 EcsC protein family GspL_C PF12693.7 CTQ27703.1 - 2 8.2 8.1 0.5 10.2 1.9 2.7 2 1 0 3 3 3 0 GspL periplasmic domain LysR_substrate PF03466.20 CTQ27704.1 - 7.7e-37 126.7 1.3 1e-36 126.3 1.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27704.1 - 2.1e-18 66.0 1.7 2.1e-18 66.0 1.7 1.7 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 CTQ27704.1 - 0.013 15.1 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Glyco_hydro_4 PF02056.16 CTQ27705.1 - 1.1e-60 204.4 0.0 1.5e-60 203.9 0.0 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Glyco_hydro_4C PF11975.8 CTQ27705.1 - 9.5e-51 172.8 0.0 6.3e-50 170.1 0.0 2.0 2 0 0 2 2 2 1 Family 4 glycosyl hydrolase C-terminal domain Peptidase_M7 PF02031.16 CTQ27705.1 - 0.096 12.8 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Streptomyces extracellular neutral proteinase (M7) family Sigma54_activat PF00158.26 CTQ27706.1 - 1e-52 178.3 0.0 1.5e-52 177.7 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_50 PF18024.1 CTQ27706.1 - 6.4e-22 76.9 0.3 1.3e-21 75.9 0.3 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma54_activ_2 PF14532.6 CTQ27706.1 - 5.4e-17 62.2 0.0 1.2e-16 61.1 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain PAS_4 PF08448.10 CTQ27706.1 - 5.7e-05 23.3 0.0 0.00015 22.0 0.0 1.8 1 1 0 1 1 1 1 PAS fold AAA PF00004.29 CTQ27706.1 - 0.00016 22.1 0.0 0.00032 21.1 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PAS PF00989.25 CTQ27706.1 - 0.00051 20.0 0.0 0.00097 19.1 0.0 1.5 1 0 0 1 1 1 1 PAS fold HTH_Tnp_ISL3 PF13542.6 CTQ27706.1 - 0.001 18.5 0.0 0.0026 17.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 AAA_5 PF07728.14 CTQ27706.1 - 0.0014 18.7 0.0 0.0061 16.6 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) PAS_8 PF13188.7 CTQ27706.1 - 0.0024 17.8 0.0 0.008 16.2 0.0 1.9 1 0 0 1 1 1 1 PAS domain ACT PF01842.25 CTQ27706.1 - 0.0046 16.7 0.0 0.014 15.2 0.1 1.9 2 0 0 2 2 2 1 ACT domain PAS_9 PF13426.7 CTQ27706.1 - 0.0069 16.6 0.0 0.015 15.5 0.0 1.6 1 0 0 1 1 1 1 PAS domain AAA_2 PF07724.14 CTQ27706.1 - 0.011 15.8 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) HTH_38 PF13936.6 CTQ27706.1 - 0.048 13.4 0.1 0.11 12.3 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Mg_chelatase PF01078.21 CTQ27706.1 - 0.05 13.0 0.1 4.8 6.5 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI NUMOD1 PF07453.13 CTQ27706.1 - 0.073 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 NUMOD1 domain AbrB PF05145.12 CTQ27707.1 - 2.4e-97 325.7 58.3 2.1e-96 322.6 45.7 2.0 1 1 1 2 2 2 2 Transition state regulatory protein AbrB Redoxin PF08534.10 CTQ27708.1 - 3.8e-31 107.8 0.1 4.5e-31 107.5 0.1 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 CTQ27708.1 - 6.6e-15 55.1 0.0 8e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family MR_MLE_N PF02746.16 CTQ27709.1 - 8.1e-27 93.8 0.5 1.8e-26 92.7 0.0 1.8 2 0 0 2 2 2 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MR_MLE_C PF13378.6 CTQ27709.1 - 1.2e-25 90.4 1.4 1.5e-25 90.0 0.4 1.6 2 0 0 2 2 2 1 Enolase C-terminal domain-like Peptidase_M14 PF00246.24 CTQ27710.1 - 4.1e-11 43.2 0.0 1.1e-10 41.8 0.0 1.5 1 1 0 1 1 1 1 Zinc carboxypeptidase AstE_AspA PF04952.14 CTQ27710.1 - 4.9e-06 25.8 0.0 7.1e-06 25.3 0.0 1.2 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family DUF2817 PF10994.8 CTQ27710.1 - 0.00034 20.1 0.0 0.00041 19.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2817) SBP_bac_5 PF00496.22 CTQ27711.1 - 1.1e-86 291.2 10.6 1.4e-86 290.8 10.6 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF4038 PF13204.6 CTQ27711.1 - 0.053 13.2 0.2 0.76 9.4 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4038) SBP_bac_3 PF00497.20 CTQ27711.1 - 0.057 12.8 0.2 0.23 10.8 0.0 1.9 2 0 0 2 2 2 0 Bacterial extracellular solute-binding proteins, family 3 Pro-kuma_activ PF09286.11 CTQ27713.1 - 0.14 12.5 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Pro-kumamolisin, activation domain LysR_substrate PF03466.20 CTQ27714.1 - 3.4e-35 121.3 0.3 3.4e-35 121.3 0.3 1.6 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27714.1 - 1.7e-23 82.3 2.0 3e-23 81.5 2.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ27714.1 - 0.0038 17.1 0.2 0.011 15.6 0.1 1.8 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 CTQ27714.1 - 0.0086 15.6 0.0 0.016 14.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 CTQ27714.1 - 0.03 14.4 0.4 0.062 13.4 0.4 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 CTQ27714.1 - 0.052 13.0 0.1 0.2 11.1 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_IclR PF09339.10 CTQ27714.1 - 0.08 12.8 2.5 0.094 12.5 0.1 2.3 3 0 0 3 3 3 0 IclR helix-turn-helix domain HTH_28 PF13518.6 CTQ27714.1 - 0.097 12.8 0.2 0.27 11.4 0.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Hydrolase_4 PF12146.8 CTQ27715.1 - 3.1e-05 23.4 0.1 0.063 12.5 0.1 2.4 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 CTQ27715.1 - 7.8e-05 22.3 0.1 0.00098 18.7 0.0 2.4 2 1 0 2 2 2 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 CTQ27715.1 - 0.00012 21.7 0.1 0.00045 19.9 0.1 1.8 2 0 0 2 2 2 1 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_1 PF00561.20 CTQ27715.1 - 0.00021 21.0 0.0 0.0024 17.6 0.0 2.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 CTQ27715.1 - 0.00059 18.6 0.0 0.0014 17.4 0.0 1.6 2 0 0 2 2 2 1 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 CTQ27715.1 - 0.0022 17.5 0.6 0.018 14.6 0.6 2.2 2 0 0 2 2 2 1 Prolyl oligopeptidase family BAAT_C PF08840.11 CTQ27715.1 - 0.0035 17.3 0.0 0.0051 16.8 0.0 1.3 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal MFS_1 PF07690.16 CTQ27716.1 - 1.5e-31 109.6 62.7 1.5e-27 96.5 48.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF3341 PF11821.8 CTQ27716.1 - 0.031 13.9 0.9 0.031 13.9 0.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3341) DUF5337 PF17272.2 CTQ27716.1 - 0.24 11.3 0.1 0.24 11.3 0.1 3.2 2 0 0 2 2 2 0 Family of unknown function (DUF5337) Aldo_ket_red PF00248.21 CTQ27717.1 - 3.6e-38 131.4 0.1 1.9e-36 125.8 0.1 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Glyco_hydro_2 PF00703.21 CTQ27718.1 - 7.4e-09 36.3 0.0 1.6e-08 35.2 0.0 1.6 2 0 0 2 2 2 1 Glycosyl hydrolases family 2 Glyco_hydro_2_N PF02837.18 CTQ27718.1 - 4.4e-06 26.7 0.1 1.9e-05 24.6 0.1 1.9 1 1 0 1 1 1 1 Glycosyl hydrolases family 2, sugar binding domain Glyco_hydro_2_C PF02836.17 CTQ27718.1 - 2.7e-05 23.4 0.2 0.00028 20.1 0.2 2.2 1 1 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Mannosidase_ig PF17786.1 CTQ27718.1 - 7.5e-05 23.3 0.0 0.00027 21.5 0.0 1.9 2 0 0 2 2 2 1 Mannosidase Ig/CBM-like domain BetaGal_dom4_5 PF13364.6 CTQ27718.1 - 0.03 14.9 0.1 0.07 13.7 0.1 1.6 1 0 0 1 1 1 0 Beta-galactosidase jelly roll domain Response_reg PF00072.24 CTQ27719.1 - 1.9e-42 144.0 0.1 5.6e-22 78.0 0.0 2.7 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.26 CTQ27719.1 - 3.1e-31 108.2 0.0 6.1e-31 107.2 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ27719.1 - 8.4e-22 77.0 0.1 8.4e-22 77.0 0.1 3.0 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS_7 PF12860.7 CTQ27719.1 - 9e-14 51.6 0.0 1.1e-12 48.1 0.0 2.4 2 0 0 2 2 2 1 PAS fold PAS_3 PF08447.12 CTQ27719.1 - 1.4e-12 47.7 0.0 3.8e-10 39.9 0.0 2.7 2 0 0 2 2 2 1 PAS fold Hpt PF01627.23 CTQ27719.1 - 3.1e-09 37.0 2.5 2.8e-08 33.9 2.5 2.8 1 0 0 1 1 1 1 Hpt domain HATPase_c_3 PF13589.6 CTQ27719.1 - 0.032 14.1 0.0 0.064 13.1 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF3131 PF11329.8 CTQ27721.1 - 3.1e-113 378.6 0.8 3.6e-113 378.3 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3131) DUF3131 PF11329.8 CTQ27722.1 - 2.5e-147 490.8 0.9 2.9e-147 490.5 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3131) DUF4422 PF14393.6 CTQ27722.1 - 0.12 12.2 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4422) DUF3131 PF11329.8 CTQ27723.1 - 2.6e-86 290.0 0.7 3e-86 289.8 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3131) FlhE PF06366.13 CTQ27723.1 - 0.024 14.6 0.1 0.41 10.6 0.0 2.7 3 0 0 3 3 3 0 Flagellar protein FlhE Glycos_transf_2 PF00535.26 CTQ27724.1 - 1.7e-17 63.8 0.0 5.9e-17 62.0 0.0 1.8 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 CTQ27724.1 - 5.7e-11 42.8 0.1 4e-10 40.0 0.1 2.1 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 CTQ27724.1 - 4.3e-08 32.8 0.0 8.4e-07 28.6 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.6 CTQ27724.1 - 3.9e-06 26.9 5.6 3.9e-06 26.9 5.6 3.5 2 1 0 2 2 2 1 Glycosyl transferase family group 2 OpgC_C PF10129.9 CTQ27725.1 - 3.7e-47 160.9 22.4 4.2e-47 160.8 22.4 1.0 1 0 0 1 1 1 1 OpgC protein DUF1624 PF07786.12 CTQ27725.1 - 0.44 10.1 23.1 2.6 7.5 21.8 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.22 CTQ27725.1 - 1.1 8.2 36.7 1.9 7.5 36.7 1.5 1 1 0 1 1 1 0 Acyltransferase family OpgC_C PF10129.9 CTQ27726.1 - 1.1e-09 37.7 2.6 1.2e-09 37.6 2.6 1.0 1 0 0 1 1 1 1 OpgC protein Hen1_Lam_C PF18441.1 CTQ27727.1 - 0.17 11.7 0.0 0.9 9.4 0.0 2.0 2 0 0 2 2 2 0 Hen1 La-motif C-terminal domain SpoIIE PF07228.12 CTQ27728.1 - 1.1e-34 120.1 0.0 2.1e-34 119.2 0.0 1.4 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Response_reg PF00072.24 CTQ27728.1 - 7.6e-28 96.9 0.0 1.2e-27 96.3 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain STAS PF01740.21 CTQ27729.1 - 1.2e-12 47.5 0.0 1.3e-12 47.3 0.0 1.0 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 CTQ27729.1 - 1.8e-08 34.6 0.0 2.4e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 STAS domain HATPase_c_2 PF13581.6 CTQ27730.1 - 2.2e-17 63.2 0.0 2.6e-17 62.9 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain DUF2061 PF09834.9 CTQ27730.1 - 0.091 13.3 0.0 0.15 12.6 0.0 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2061) LysR_substrate PF03466.20 CTQ27731.1 - 6.1e-38 130.3 1.2 6.1e-38 130.3 1.2 1.5 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27731.1 - 1.1e-18 66.9 1.2 2.3e-18 65.9 1.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF3322 PF11795.8 CTQ27731.1 - 0.13 12.2 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) adh_short_C2 PF13561.6 CTQ27732.1 - 3.4e-51 174.0 0.6 4.1e-51 173.8 0.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27732.1 - 3.4e-41 140.9 0.2 4e-41 140.6 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ27732.1 - 4.8e-08 33.1 0.2 7.2e-08 32.5 0.2 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ27732.1 - 1e-05 25.2 0.4 8.8e-05 22.1 0.4 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 CTQ27732.1 - 0.0014 18.0 0.0 0.0021 17.5 0.0 1.2 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) Glyco_trans_4_4 PF13579.6 CTQ27732.1 - 0.0043 17.5 0.2 0.14 12.6 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain HEAT_2 PF13646.6 CTQ27732.1 - 0.034 14.5 0.5 0.44 11.0 0.0 2.5 2 2 0 2 2 2 0 HEAT repeats NmrA PF05368.13 CTQ27732.1 - 0.085 12.4 0.3 3 7.4 0.0 2.1 2 0 0 2 2 2 0 NmrA-like family HD PF01966.22 CTQ27733.1 - 2.4e-10 40.7 4.3 7.2e-10 39.1 2.2 2.7 2 1 0 2 2 2 1 HD domain DUF3361 PF11841.8 CTQ27733.1 - 0.0092 15.9 0.2 0.098 12.6 0.0 2.6 3 0 0 3 3 3 1 Domain of unknown function (DUF3361) DJ-1_PfpI PF01965.24 CTQ27734.1 - 8.9e-51 172.0 0.0 1e-50 171.8 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 CTQ27734.1 - 0.00039 20.2 0.0 0.00049 19.9 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I ThiJ_like PF17124.5 CTQ27734.1 - 0.0045 16.7 0.0 0.024 14.3 0.0 2.0 1 1 1 2 2 2 1 ThiJ/PfpI family-like Peptidase_C26 PF07722.13 CTQ27734.1 - 0.058 13.1 0.1 0.13 12.0 0.1 1.7 1 1 0 1 1 1 0 Peptidase C26 Catalase_C PF18011.1 CTQ27734.1 - 0.059 13.0 0.0 0.12 12.0 0.0 1.5 1 1 0 1 1 1 0 C-terminal domain found in long catalases GATase_3 PF07685.14 CTQ27734.1 - 0.064 12.8 0.0 0.089 12.4 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain T6SS_VipA PF05591.12 CTQ27735.1 - 2.4e-53 180.1 3.5 2.7e-53 179.9 3.5 1.0 1 0 0 1 1 1 1 Type VI secretion system, VipA, VC_A0107 or Hcp2 GerD PF17898.1 CTQ27735.1 - 0.0085 16.0 0.1 0.013 15.5 0.1 1.4 1 1 0 1 1 1 1 Spore germination GerD central core domain VipB PF05943.12 CTQ27736.1 - 2.9e-167 556.8 0.0 3.4e-167 556.5 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion protein, EvpB/VC_A0108, tail sheath PaaA_PaaC PF05138.12 CTQ27736.1 - 0.061 12.5 0.1 0.17 11.0 0.1 1.7 2 0 0 2 2 2 0 Phenylacetic acid catabolic protein T6SS_VasE PF05936.12 CTQ27737.1 - 7.2e-138 459.9 6.3 8.1e-138 459.7 6.3 1.0 1 0 0 1 1 1 1 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DotU PF09850.9 CTQ27738.1 - 1.6e-35 122.7 0.2 1.8e-35 122.6 0.2 1.0 1 0 0 1 1 1 1 Type VI secretion system protein DotU OmpA PF00691.20 CTQ27739.1 - 1.2e-16 60.8 0.0 2.6e-16 59.8 0.0 1.5 1 0 0 1 1 1 1 OmpA family DUF4131 PF13567.6 CTQ27739.1 - 0.00082 19.1 6.3 0.019 14.7 1.8 2.6 2 0 0 2 2 2 2 Domain of unknown function (DUF4131) T6SS_HCP PF05638.12 CTQ27740.1 - 4.3e-37 127.4 0.1 5e-37 127.2 0.1 1.0 1 0 0 1 1 1 1 Type VI secretion system effector, Hcp Inhibitor_I24 PF10465.9 CTQ27740.1 - 0.076 13.0 0.2 0.12 12.4 0.2 1.3 1 0 0 1 1 1 0 PinA peptidase inhibitor AAA_2 PF07724.14 CTQ27741.1 - 4.3e-39 134.4 0.0 2.7e-38 131.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 CTQ27741.1 - 9.9e-31 105.8 0.0 2.1e-30 104.7 0.0 1.6 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 CTQ27741.1 - 3.2e-20 72.9 0.0 1.4e-09 38.5 0.0 2.8 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 CTQ27741.1 - 5e-15 55.7 0.2 5.3e-10 39.4 0.0 3.0 2 1 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CTQ27741.1 - 3.4e-13 50.3 14.9 6.9e-07 29.8 0.1 6.8 5 3 2 7 7 6 2 AAA ATPase domain ClpB_D2-small PF10431.9 CTQ27741.1 - 4.9e-13 48.9 0.0 3.3e-12 46.3 0.0 2.4 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA_22 PF13401.6 CTQ27741.1 - 3.4e-09 37.1 1.5 0.0069 16.7 0.0 4.8 4 1 0 4 4 4 2 AAA domain AAA_25 PF13481.6 CTQ27741.1 - 5e-08 32.8 3.9 0.043 13.4 0.0 4.4 3 1 1 4 4 4 2 AAA domain NACHT PF05729.12 CTQ27741.1 - 8.3e-06 25.8 0.3 0.0016 18.4 0.0 3.4 3 1 0 3 3 2 1 NACHT domain IstB_IS21 PF01695.17 CTQ27741.1 - 9.8e-06 25.4 0.2 0.11 12.2 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein ATPase_2 PF01637.18 CTQ27741.1 - 1e-05 25.6 0.0 0.53 10.2 0.0 3.5 3 1 0 3 3 3 2 ATPase domain predominantly from Archaea AAA_7 PF12775.7 CTQ27741.1 - 1.3e-05 24.8 0.0 0.058 12.9 0.0 2.4 2 0 0 2 2 2 2 P-loop containing dynein motor region Sigma54_activat PF00158.26 CTQ27741.1 - 2.2e-05 24.2 0.0 0.00077 19.2 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain Clp_N PF02861.20 CTQ27741.1 - 4.1e-05 23.6 0.4 0.012 15.7 0.1 2.9 2 0 0 2 2 2 1 Clp amino terminal domain, pathogenicity island component TniB PF05621.11 CTQ27741.1 - 7.2e-05 22.3 0.0 1.5 8.2 0.0 3.5 3 0 0 3 3 3 2 Bacterial TniB protein AAA_24 PF13479.6 CTQ27741.1 - 0.00014 21.6 0.0 0.041 13.6 0.0 2.9 3 0 0 3 3 3 1 AAA domain AAA_23 PF13476.6 CTQ27741.1 - 0.00014 22.4 0.0 0.14 12.7 0.0 3.3 3 0 0 3 3 3 1 AAA domain Zeta_toxin PF06414.12 CTQ27741.1 - 0.00025 20.4 0.0 0.14 11.5 0.0 2.4 2 0 0 2 2 2 1 Zeta toxin AAA_33 PF13671.6 CTQ27741.1 - 0.00056 20.1 0.2 1.5 9.0 0.0 3.3 3 0 0 3 3 3 1 AAA domain AAA_30 PF13604.6 CTQ27741.1 - 0.00074 19.3 0.6 2.3 7.9 0.1 3.4 3 1 0 3 3 2 2 AAA domain RNA_helicase PF00910.22 CTQ27741.1 - 0.0012 19.2 0.0 4.8 7.6 0.0 3.4 4 0 0 4 4 2 0 RNA helicase ResIII PF04851.15 CTQ27741.1 - 0.0013 18.8 0.0 0.2 11.7 0.0 3.1 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit AAA_18 PF13238.6 CTQ27741.1 - 0.0046 17.5 0.4 1.9 9.0 0.1 2.7 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CTQ27741.1 - 0.0057 16.4 0.1 1.9 8.3 0.1 2.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_14 PF13173.6 CTQ27741.1 - 0.0058 16.7 0.0 3.4 7.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 CTQ27741.1 - 0.0074 16.6 0.2 4.1 7.6 0.1 3.0 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 CTQ27741.1 - 0.011 14.9 0.1 0.31 10.2 0.0 2.4 3 0 0 3 3 2 0 TIP49 P-loop domain TsaE PF02367.17 CTQ27741.1 - 0.011 15.7 0.1 5.6 7.0 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 CTQ27741.1 - 0.013 15.4 0.3 1.6 8.6 0.0 3.1 3 1 1 4 4 3 0 RsgA GTPase AAA_19 PF13245.6 CTQ27741.1 - 0.016 15.6 2.1 8.6 6.7 0.1 3.4 3 1 0 3 3 2 0 AAA domain Mg_chelatase PF01078.21 CTQ27741.1 - 0.017 14.5 0.4 14 5.0 0.0 3.4 2 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI SRP54 PF00448.22 CTQ27741.1 - 0.022 14.4 0.1 0.81 9.3 0.1 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DUF815 PF05673.13 CTQ27741.1 - 0.027 13.6 0.0 1 8.5 0.0 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF815) Roc PF08477.13 CTQ27741.1 - 0.031 14.5 0.0 3.8 7.7 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 CTQ27741.1 - 0.031 14.8 0.8 33 5.0 0.0 3.5 3 0 0 3 3 3 0 ABC transporter PhoH PF02562.16 CTQ27741.1 - 0.041 13.3 0.1 2.2 7.7 0.2 2.5 2 0 0 2 2 2 0 PhoH-like protein AAA_6 PF12774.7 CTQ27741.1 - 0.047 12.7 0.0 0.14 11.1 0.0 1.7 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region AAA_11 PF13086.6 CTQ27741.1 - 0.089 12.6 0.0 1.3 8.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 CTQ27741.1 - 0.1 12.5 0.0 5.1 7.0 0.0 2.6 3 0 0 3 3 2 0 Rad17 P-loop domain Phage_GPD PF05954.11 CTQ27742.1 - 2e-62 211.2 3.2 3.1e-62 210.6 3.2 1.3 1 0 0 1 1 1 1 Phage late control gene D protein (GPD) DUF2345 PF10106.9 CTQ27742.1 - 1e-47 161.8 1.4 2.9e-47 160.3 1.4 1.7 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2345) T6SS_Vgr PF13296.6 CTQ27742.1 - 1.4e-35 121.7 3.4 1.5e-35 121.6 0.3 2.6 2 1 1 3 3 3 1 Putative type VI secretion system Rhs element Vgr Sarcoglycan_1 PF04790.13 CTQ27742.1 - 0.02 14.2 0.4 0.038 13.3 0.4 1.4 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein HAP1_N PF04849.13 CTQ27742.1 - 0.11 11.6 0.2 0.25 10.5 0.2 1.5 1 0 0 1 1 1 0 HAP1 N-terminal conserved region Chlorovi_GP_rpt PF06598.11 CTQ27744.1 - 0.026 14.6 1.3 0.032 14.3 0.3 1.7 2 0 0 2 2 2 0 Chlorovirus glycoprotein repeat Peptidase_M23 PF01551.22 CTQ27745.1 - 0.0034 17.5 0.0 0.0097 16.1 0.0 1.7 1 0 0 1 1 1 1 Peptidase family M23 Helveticin_J PF17312.2 CTQ27746.1 - 0.019 14.1 0.7 0.028 13.5 0.7 1.3 1 0 0 1 1 1 0 Bacteriocin helveticin-J rve_3 PF13683.6 CTQ27749.1 - 3.2e-27 94.1 1.3 4.5e-27 93.6 0.1 1.9 2 0 0 2 2 2 1 Integrase core domain rve PF00665.26 CTQ27749.1 - 8e-24 84.1 0.0 2e-23 82.8 0.0 1.7 1 0 0 1 1 1 1 Integrase core domain HTH_Tnp_1 PF01527.20 CTQ27749.1 - 1.4e-23 83.0 2.8 1.3e-21 76.7 0.9 2.6 2 0 0 2 2 2 1 Transposase HTH_21 PF13276.6 CTQ27749.1 - 9.2e-12 44.9 5.4 9.8e-11 41.6 5.1 2.4 2 0 0 2 2 2 1 HTH-like domain HTH_23 PF13384.6 CTQ27749.1 - 9.4e-08 31.6 5.9 4.1e-06 26.4 0.0 4.1 3 0 0 3 3 3 1 Homeodomain-like domain HTH_28 PF13518.6 CTQ27749.1 - 5.1e-06 26.5 3.6 0.00014 21.9 0.0 4.0 4 1 0 4 4 4 1 Helix-turn-helix domain Terminase_5 PF06056.12 CTQ27749.1 - 1e-05 25.3 0.3 0.0043 16.9 0.0 2.9 2 0 0 2 2 2 1 Putative ATPase subunit of terminase (gpP-like) rve_2 PF13333.6 CTQ27749.1 - 1.4e-05 25.1 0.0 4.1e-05 23.7 0.0 1.8 1 0 0 1 1 1 1 Integrase core domain HTH_29 PF13551.6 CTQ27749.1 - 0.00012 22.0 0.0 0.00012 22.0 0.0 3.8 4 2 0 4 4 4 1 Winged helix-turn helix HTH_Tnp_1_2 PF13022.6 CTQ27749.1 - 0.00041 20.5 0.5 0.013 15.6 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix of insertion element transposase HTH_18 PF12833.7 CTQ27749.1 - 0.001 19.3 0.1 0.03 14.6 0.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain DDE_Tnp_IS240 PF13610.6 CTQ27749.1 - 0.0035 17.6 0.0 0.012 15.9 0.0 1.9 2 0 0 2 2 2 1 DDE domain HTH_Tnp_IS630 PF01710.16 CTQ27749.1 - 0.0065 16.5 3.5 0.021 14.8 0.4 2.4 1 1 1 2 2 2 1 Transposase HTH_22 PF13309.6 CTQ27749.1 - 0.013 15.6 0.1 0.11 12.6 0.0 2.4 2 0 0 2 2 2 0 HTH domain HTH_17 PF12728.7 CTQ27749.1 - 0.013 15.7 0.1 0.11 12.7 0.0 2.7 2 1 0 2 2 2 0 Helix-turn-helix domain Phage_AlpA PF05930.12 CTQ27749.1 - 0.064 13.1 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) DUF1492 PF07374.11 CTQ27749.1 - 0.08 13.1 0.0 0.19 11.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) GP3_package PF16677.5 CTQ27749.1 - 0.15 12.2 0.7 0.3 11.2 0.1 1.8 2 0 0 2 2 2 0 DNA-packaging protein gp3 DivIC PF04977.15 CTQ27749.1 - 2.3 8.0 4.4 0.99 9.2 1.6 1.8 2 0 0 2 2 2 0 Septum formation initiator IcmF-related PF06761.12 CTQ27754.1 - 1.1e-67 228.8 8.4 1.9e-67 228.0 8.4 1.4 1 0 0 1 1 1 1 Intracellular multiplication and human macrophage-killing IcmF_C PF06744.12 CTQ27754.1 - 1.9e-53 181.1 1.9 4.4e-53 179.9 1.9 1.7 1 0 0 1 1 1 1 Type VI secretion protein IcmF C-terminal T3SS_needle_reg PF09025.10 CTQ27754.1 - 0.25 11.3 2.9 3.8 7.5 0.2 3.1 3 0 0 3 3 3 0 YopR, type III needle-polymerisation regulator T6SS_VasJ PF16989.5 CTQ27755.1 - 1.1e-73 247.8 8.3 2.4e-73 246.8 8.3 1.6 1 0 0 1 1 1 1 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ ImpA_N PF06812.12 CTQ27755.1 - 1.3e-23 83.3 0.2 6.2e-23 81.2 0.0 2.3 2 0 0 2 2 2 1 ImpA, N-terminal, type VI secretion system THB PF18362.1 CTQ27755.1 - 1.3 8.7 3.4 25 4.6 0.5 2.7 2 0 0 2 2 2 0 Tri-helix bundle domain PAAR_motif PF05488.13 CTQ27756.1 - 8.4e-10 38.7 3.3 1.9e-09 37.6 3.0 1.7 1 1 1 2 2 2 2 PAAR motif Ntox44 PF15607.6 CTQ27757.1 - 0.025 14.9 0.1 0.04 14.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial toxin 44 T6SS_TssF PF05947.12 CTQ27759.1 - 5.5e-183 609.8 0.1 6.1e-183 609.6 0.1 1.0 1 0 0 1 1 1 1 Type VI secretion system, TssF T6SS_TssG PF06996.11 CTQ27760.1 - 3.2e-67 226.9 0.0 3.8e-67 226.6 0.0 1.1 1 0 0 1 1 1 1 Type VI secretion, TssG T6SS-SciN PF12790.7 CTQ27761.1 - 1.9e-29 101.8 0.1 2.4e-29 101.5 0.1 1.1 1 0 0 1 1 1 1 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 CbbQ_C PF08406.10 CTQ27762.1 - 0.084 13.1 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 CbbQ/NirQ/NorQ C-terminal adh_short_C2 PF13561.6 CTQ27763.1 - 1.3e-52 178.7 0.1 1.7e-52 178.3 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27763.1 - 1.5e-44 151.8 0.0 1.8e-44 151.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 CTQ27763.1 - 4.5e-07 29.6 0.0 9.5e-07 28.5 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 CTQ27763.1 - 0.00031 20.7 0.1 0.00036 20.5 0.1 1.2 1 0 0 1 1 1 1 NAD(P)H-binding F420_oxidored PF03807.17 CTQ27763.1 - 0.001 19.6 0.1 0.0021 18.6 0.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent KR PF08659.10 CTQ27763.1 - 0.0022 18.0 0.1 0.0031 17.5 0.1 1.3 1 0 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 CTQ27763.1 - 0.023 13.8 0.0 0.033 13.3 0.0 1.1 1 0 0 1 1 1 0 RmlD substrate binding domain Eno-Rase_NADH_b PF12242.8 CTQ27763.1 - 0.06 13.1 1.2 0.2 11.4 0.2 2.4 3 0 0 3 3 3 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase TetR_N PF00440.23 CTQ27764.1 - 3.7e-11 42.6 0.1 6.7e-11 41.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family adh_short_C2 PF13561.6 CTQ27765.1 - 2e-49 168.3 0.6 2.3e-49 168.1 0.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27765.1 - 4.8e-45 153.4 0.0 5.8e-45 153.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ27765.1 - 9.6e-11 41.9 0.1 1.4e-10 41.4 0.1 1.1 1 0 0 1 1 1 1 KR domain HEAT_2 PF13646.6 CTQ27765.1 - 0.011 16.2 0.0 0.031 14.6 0.0 1.7 1 0 0 1 1 1 0 HEAT repeats AraC_N PF06719.13 CTQ27767.1 - 3.8e-37 127.2 0.0 5.9e-37 126.6 0.0 1.3 1 0 0 1 1 1 1 AraC-type transcriptional regulator N-terminus HTH_18 PF12833.7 CTQ27767.1 - 1.8e-19 69.7 1.2 1.8e-19 69.7 1.2 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ27767.1 - 1.2e-11 44.4 0.0 2.9e-05 24.1 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family TetR_N PF00440.23 CTQ27767.1 - 0.00019 21.1 0.0 0.00068 19.4 0.0 2.0 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_15 PF12324.8 CTQ27767.1 - 0.0015 18.4 0.1 2.1 8.4 0.0 2.6 2 0 0 2 2 2 2 Helix-turn-helix domain of alkylmercury lyase HTH_31 PF13560.6 CTQ27767.1 - 0.0043 17.4 0.8 2.7 8.4 0.0 3.5 1 1 2 3 3 3 1 Helix-turn-helix domain AraC_binding_2 PF14525.6 CTQ27767.1 - 0.0066 16.1 0.9 0.0066 16.1 0.9 2.0 2 0 0 2 2 2 1 AraC-binding-like domain HTH_24 PF13412.6 CTQ27767.1 - 0.0083 15.7 0.0 2.3 7.8 0.0 2.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 CTQ27767.1 - 0.014 15.2 0.1 1.2 9.0 0.0 2.7 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_23 PF13384.6 CTQ27767.1 - 0.071 12.9 0.2 0.43 10.5 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain DUF1471 PF07338.13 CTQ27768.1 - 5.8e-09 35.8 0.9 7.2e-09 35.5 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) NmrA PF05368.13 CTQ27769.1 - 1.8e-16 60.4 0.0 2.1e-16 60.2 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family Sacchrp_dh_NADP PF03435.18 CTQ27769.1 - 0.061 13.6 1.1 0.15 12.4 0.4 1.9 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain DUF3404 PF11884.8 CTQ27769.1 - 0.17 11.1 0.0 0.25 10.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) LysR_substrate PF03466.20 CTQ27770.1 - 8.6e-45 152.7 1.9 1.4e-44 152.0 1.9 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27770.1 - 1.7e-16 59.9 0.7 4.1e-16 58.7 0.7 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ27770.1 - 0.028 14.3 0.1 0.11 12.4 0.0 2.0 2 0 0 2 2 2 0 MarR family HTH_IclR PF09339.10 CTQ27770.1 - 0.029 14.2 0.0 0.15 11.9 0.0 2.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain LysR_substrate PF03466.20 CTQ27771.1 - 6.8e-25 87.7 5.1 9.8e-25 87.1 5.1 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27771.1 - 1.1e-16 60.5 0.0 1.8e-16 59.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ27771.1 - 0.032 14.0 0.0 0.065 13.0 0.0 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Lactamase_B PF00753.27 CTQ27772.1 - 3.3e-23 82.7 0.2 4.8e-23 82.2 0.2 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 CTQ27772.1 - 1.2e-06 28.2 0.1 2.3e-06 27.3 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 CTQ27772.1 - 0.058 13.3 0.1 0.095 12.6 0.1 1.7 1 1 0 1 1 1 0 Beta-lactamase superfamily domain NmrA PF05368.13 CTQ27773.1 - 9.8e-50 169.3 0.0 1.2e-49 169.0 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 CTQ27773.1 - 1.7e-20 73.7 0.2 2.1e-20 73.4 0.2 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 CTQ27773.1 - 2.9e-07 30.2 0.1 4.3e-07 29.6 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 CTQ27773.1 - 0.095 11.7 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 CTQ27773.1 - 0.12 11.8 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase TetR_N PF00440.23 CTQ27774.1 - 1.8e-15 56.5 0.0 4.5e-15 55.2 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 CTQ27774.1 - 2.8e-05 24.4 4.6 2.8e-05 24.4 4.6 2.2 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain CENP-B_N PF04218.13 CTQ27774.1 - 0.003 17.2 0.0 0.0047 16.5 0.0 1.3 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain HTH_IclR PF09339.10 CTQ27774.1 - 0.061 13.1 3.0 0.39 10.6 0.0 3.5 4 1 0 4 4 4 0 IclR helix-turn-helix domain LacI PF00356.21 CTQ27774.1 - 0.064 13.1 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family ADH_zinc_N_2 PF13602.6 CTQ27775.1 - 6.3e-25 88.8 0.1 1e-24 88.1 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 CTQ27775.1 - 8.5e-15 54.9 0.3 2e-14 53.7 0.3 1.7 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 CTQ27775.1 - 4.1e-09 36.3 0.0 1.1e-08 34.9 0.0 1.7 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 CTQ27775.1 - 0.0084 16.0 0.1 0.023 14.6 0.1 1.8 1 0 0 1 1 1 1 N-terminal domain of oxidoreductase ELFV_dehydrog PF00208.21 CTQ27775.1 - 0.044 13.5 0.0 0.088 12.5 0.0 1.4 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AlaDh_PNT_C PF01262.21 CTQ27775.1 - 0.054 12.8 0.2 0.098 11.9 0.2 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain adh_short PF00106.25 CTQ27775.1 - 0.1 12.1 1.4 0.11 11.9 0.4 1.6 2 0 0 2 2 2 0 short chain dehydrogenase Aminotran_1_2 PF00155.21 CTQ27776.1 - 4.3e-61 207.1 0.0 5.4e-61 206.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Lipoprotein_9 PF03180.14 CTQ27777.1 - 3.7e-51 173.5 0.0 4.1e-51 173.4 0.0 1.0 1 0 0 1 1 1 1 NLPA lipoprotein KNOX1 PF03790.13 CTQ27777.1 - 0.024 14.3 0.1 9.8 6.0 0.0 2.5 2 0 0 2 2 2 0 KNOX1 domain ABC_tran PF00005.27 CTQ27778.1 - 2.3e-35 122.1 0.0 3.6e-35 121.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter NIL PF09383.10 CTQ27778.1 - 6e-18 64.5 0.1 1.2e-17 63.5 0.1 1.6 1 0 0 1 1 1 1 NIL domain AAA_21 PF13304.6 CTQ27778.1 - 8.6e-06 25.8 2.3 0.042 13.7 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ27778.1 - 3.9e-05 23.2 0.7 0.0002 20.9 0.7 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ27778.1 - 0.00061 20.1 0.3 0.0047 17.2 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ27778.1 - 0.0063 16.9 0.1 0.014 15.7 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ27778.1 - 0.0066 16.2 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ27778.1 - 0.0097 16.4 0.1 0.018 15.5 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CTQ27778.1 - 0.023 14.4 0.0 0.089 12.5 0.0 2.1 2 1 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 CTQ27778.1 - 0.04 13.8 0.0 0.08 12.8 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 CTQ27778.1 - 0.045 13.8 0.0 0.13 12.4 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase ABC_ATPase PF09818.9 CTQ27778.1 - 0.071 11.9 0.8 5 5.8 0.1 2.5 2 1 0 2 2 2 0 Predicted ATPase of the ABC class PA28_beta PF02252.18 CTQ27778.1 - 0.079 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Proteasome activator pa28 beta subunit AAA_18 PF13238.6 CTQ27778.1 - 0.1 13.1 0.0 0.21 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 CTQ27779.1 - 3.8e-21 75.7 16.1 5.4e-21 75.2 16.1 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component O-antigen_lig PF13425.6 CTQ27779.1 - 3.5 6.3 6.3 0.41 9.4 1.0 1.9 2 0 0 2 2 2 0 O-antigen ligase like membrane protein Aminotran_1_2 PF00155.21 CTQ27780.1 - 2.9e-80 270.2 0.0 3.3e-80 270.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II YitT_membrane PF02588.15 CTQ27781.1 - 4.4e-32 111.1 16.0 5.3e-32 110.9 16.0 1.0 1 0 0 1 1 1 1 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABC2_membrane_5 PF13346.6 CTQ27781.1 - 8.9 5.8 14.8 0.65 9.5 8.9 1.8 2 0 0 2 2 2 0 ABC-2 family transporter protein AsnC_trans_reg PF01037.21 CTQ27782.1 - 5.1e-17 61.6 0.0 8.2e-17 60.9 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 CTQ27782.1 - 4.4e-14 52.0 1.1 8.2e-14 51.2 0.7 1.7 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 CTQ27782.1 - 1.5e-12 46.9 2.7 2.4e-12 46.2 1.5 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 CTQ27782.1 - 0.0025 17.7 0.2 0.0053 16.7 0.2 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 CTQ27782.1 - 0.0026 17.7 0.4 0.014 15.3 0.2 2.2 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain TrmB PF01978.19 CTQ27782.1 - 0.031 14.2 0.1 0.082 12.8 0.0 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 CTQ27782.1 - 0.037 13.8 0.5 0.1 12.4 0.5 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_34 PF13601.6 CTQ27782.1 - 0.042 14.0 0.1 0.14 12.4 0.1 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_20 PF12840.7 CTQ27782.1 - 0.055 13.5 0.2 0.17 12.0 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain BCIP PF13862.6 CTQ27782.1 - 0.17 11.6 0.0 0.28 11.0 0.0 1.3 1 0 0 1 1 1 0 p21-C-terminal region-binding protein AA_permease PF00324.21 CTQ27783.1 - 2.3e-114 382.7 42.2 2.7e-114 382.4 42.2 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ27783.1 - 2e-39 135.6 44.9 2.6e-39 135.3 44.9 1.1 1 0 0 1 1 1 1 Amino acid permease DPM3 PF08285.11 CTQ27783.1 - 8.7 6.6 21.6 0.29 11.3 1.8 3.8 3 1 0 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF3093 PF11292.8 CTQ27784.1 - 0.013 15.8 4.4 0.75 10.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3093) DUF4337 PF14235.6 CTQ27784.1 - 0.03 14.4 0.7 0.03 14.4 0.7 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) Neurensin PF14927.6 CTQ27784.1 - 0.19 11.4 6.0 0.2 11.4 3.5 2.3 1 1 0 1 1 1 0 Neurensin YrhK PF14145.6 CTQ27784.1 - 0.2 11.5 8.2 1.1 9.2 0.1 3.1 3 0 0 3 3 3 0 YrhK-like protein PhoLip_ATPase_C PF16212.5 CTQ27784.1 - 1.4 8.6 6.8 2 8.1 6.6 1.4 1 1 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal DUF1418 PF07214.12 CTQ27784.1 - 3.5 7.6 6.5 0.25 11.2 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1418) DUF373 PF04123.13 CTQ27784.1 - 6.4 6.1 13.9 6.5 6.1 2.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF373) DUF3867 PF12983.7 CTQ27785.1 - 0.029 14.4 0.0 0.029 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3867) GFO_IDH_MocA PF01408.22 CTQ27786.1 - 4.3e-25 88.9 0.1 6.5e-25 88.3 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 CTQ27786.1 - 1.6e-13 50.7 0.0 2.6e-13 50.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 CTQ27786.1 - 7.9e-09 36.2 0.0 1.5e-08 35.3 0.0 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 CTQ27786.1 - 0.00012 22.5 0.0 0.0002 21.8 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 CTQ27786.1 - 0.00034 20.9 0.0 0.0013 18.9 0.0 1.9 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 CTQ27786.1 - 0.00046 20.7 0.0 0.00085 19.9 0.0 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DeoRC PF00455.22 CTQ27787.1 - 7.5e-42 143.0 0.0 9.9e-42 142.6 0.0 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ27787.1 - 1.3e-17 63.3 0.5 2.3e-17 62.5 0.5 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ27787.1 - 3.8e-07 29.9 0.3 7.7e-07 29.0 0.3 1.5 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 CTQ27787.1 - 7.9e-06 25.7 0.2 2.2e-05 24.2 0.2 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family GntR PF00392.21 CTQ27787.1 - 2e-05 24.1 0.3 6.1e-05 22.6 0.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 CTQ27787.1 - 0.00032 20.6 0.1 0.00065 19.6 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 CTQ27787.1 - 0.0069 16.2 0.4 0.02 14.7 0.4 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 CTQ27787.1 - 0.013 15.1 0.4 0.027 14.0 0.4 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Put_DNA-bind_N PF06971.13 CTQ27787.1 - 0.02 14.9 0.5 0.044 13.8 0.5 1.6 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus MarR_2 PF12802.7 CTQ27787.1 - 0.026 14.4 0.2 0.058 13.3 0.2 1.5 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.20 CTQ27787.1 - 0.051 13.9 0.4 0.12 12.7 0.1 1.8 2 0 0 2 2 2 0 Transcriptional regulator PaaX PF07848.12 CTQ27787.1 - 0.068 13.4 0.0 0.19 12.0 0.0 1.8 1 0 0 1 1 1 0 PaaX-like protein DUF742 PF05331.11 CTQ27787.1 - 0.087 12.6 0.4 0.66 9.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF742) HTH_29 PF13551.6 CTQ27787.1 - 0.1 12.7 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Mga PF08280.11 CTQ27787.1 - 0.11 12.5 0.1 0.22 11.6 0.1 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_20 PF12840.7 CTQ27787.1 - 0.13 12.4 1.0 0.4 10.8 0.2 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_34 PF13601.6 CTQ27787.1 - 0.15 12.3 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain DprA_WH PF17782.1 CTQ27787.1 - 0.16 12.1 2.5 0.15 12.2 0.7 1.9 2 0 0 2 2 2 0 DprA winged helix domain E3_UFM1_ligase PF09743.9 CTQ27787.1 - 0.2 11.2 0.1 0.31 10.6 0.1 1.4 1 1 0 1 1 1 0 E3 UFM1-protein ligase 1 CorA PF01544.18 CTQ27788.1 - 3.2e-61 207.2 0.0 3.8e-61 206.9 0.0 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein DEAD PF00270.29 CTQ27789.1 - 3.4e-44 150.7 0.0 3.5e-43 147.4 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CTQ27789.1 - 1.4e-28 99.5 0.0 2.1e-27 95.7 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DbpA PF03880.15 CTQ27789.1 - 2.2e-21 75.6 0.0 4.2e-21 74.7 0.0 1.5 1 0 0 1 1 1 1 DbpA RNA binding domain ResIII PF04851.15 CTQ27789.1 - 1.6e-06 28.3 0.0 2.8e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Toxin_2 PF00451.19 CTQ27789.1 - 0.14 12.5 0.4 0.27 11.6 0.4 1.5 1 0 0 1 1 1 0 Scorpion short toxin, BmKK2 ATP_bind_3 PF01171.20 CTQ27790.1 - 1.4e-13 51.1 0.0 2e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 CTQ27790.1 - 0.19 11.8 0.0 0.94 9.5 0.0 2.0 1 1 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Usp PF00582.26 CTQ27791.1 - 2.8e-24 86.2 0.1 3.2e-24 86.0 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family KTSC PF13619.6 CTQ27792.1 - 7.1e-17 61.0 0.2 8e-17 60.8 0.2 1.0 1 0 0 1 1 1 1 KTSC domain CcmE PF03100.15 CTQ27792.1 - 0.011 15.7 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 CcmE Porin_1 PF00267.21 CTQ27794.1 - 6.7e-150 499.2 31.3 7.6e-150 499.0 31.3 1.0 1 0 0 1 1 1 1 Gram-negative porin POR_N PF01855.19 CTQ27796.1 - 2.2e-82 276.3 0.7 3.7e-82 275.5 0.7 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 CTQ27796.1 - 7.8e-34 117.3 0.0 1.4e-33 116.5 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase EKR PF10371.9 CTQ27796.1 - 4.1e-23 80.9 0.0 8e-23 80.0 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function PFOR_II PF17147.4 CTQ27796.1 - 5.8e-16 58.7 0.0 1.8e-15 57.1 0.0 1.9 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Fer4_16 PF13484.6 CTQ27796.1 - 3.1e-10 40.8 8.0 7.9e-10 39.5 8.0 1.8 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 CTQ27796.1 - 3.8e-10 40.2 8.9 1.2e-09 38.6 8.9 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain TPP_enzyme_C PF02775.21 CTQ27796.1 - 8.1e-10 38.7 0.1 2.2e-09 37.3 0.1 1.8 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Fer4 PF00037.27 CTQ27796.1 - 6.7e-08 32.0 20.8 9.4e-05 22.1 3.9 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 CTQ27796.1 - 1.6e-07 31.4 12.1 1.6e-07 31.4 12.1 2.6 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ27796.1 - 1.7e-07 31.0 19.4 1.8e-05 24.6 2.6 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 CTQ27796.1 - 2.2e-07 30.9 21.1 9.6e-07 28.9 10.5 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ27796.1 - 6.4e-07 29.4 12.9 8.7e-06 25.8 12.8 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 CTQ27796.1 - 7.8e-06 26.3 8.7 1.9e-05 25.1 7.7 2.3 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 CTQ27796.1 - 2.6e-05 24.1 18.0 0.005 16.9 3.6 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 CTQ27796.1 - 0.00024 21.2 4.1 0.049 13.8 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ27796.1 - 0.00043 20.7 10.8 0.00043 20.7 10.8 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Transketolase_C PF02780.20 CTQ27796.1 - 0.00054 19.8 0.5 0.0031 17.4 0.0 2.4 3 0 0 3 3 3 1 Transketolase, C-terminal domain FlgM PF04316.13 CTQ27796.1 - 0.015 15.6 0.1 0.076 13.4 0.1 2.3 1 0 0 1 1 1 0 Anti-sigma-28 factor, FlgM Fer4_3 PF12798.7 CTQ27796.1 - 0.025 15.5 4.8 0.025 15.5 4.8 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 CTQ27796.1 - 0.052 14.3 3.6 1.6 9.5 0.3 2.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 CTQ27796.1 - 0.19 12.3 11.7 0.23 12.0 0.7 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 CTQ27796.1 - 0.25 12.0 17.8 0.57 10.8 1.3 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 CTQ27796.1 - 0.74 10.7 6.4 3.4 8.6 0.1 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain DUF333 PF03891.15 CTQ27798.1 - 2.9e-14 53.0 0.7 3.8e-14 52.6 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF333) InvH PF04741.12 CTQ27798.1 - 0.13 12.2 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 InvH outer membrane lipoprotein META PF03724.16 CTQ27799.1 - 7.1e-20 71.0 0.3 8.5e-20 70.7 0.3 1.1 1 0 0 1 1 1 1 META domain DUF2857 PF11198.8 CTQ27799.1 - 0.053 13.3 0.1 0.072 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) 2-Hacid_dh_C PF02826.19 CTQ27800.1 - 1e-53 181.3 0.0 1.6e-53 180.7 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 CTQ27800.1 - 3.8e-35 120.5 0.0 4.4e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 CTQ27800.1 - 0.00026 21.1 0.0 0.00054 20.1 0.0 1.5 1 1 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.15 CTQ27800.1 - 0.00026 21.2 0.0 0.00094 19.4 0.0 1.9 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase XdhC_C PF13478.6 CTQ27800.1 - 0.0015 19.1 0.1 0.01 16.3 0.0 2.3 3 0 0 3 3 3 1 XdhC Rossmann domain CoA_binding_2 PF13380.6 CTQ27800.1 - 0.022 15.3 0.0 0.071 13.6 0.0 1.8 1 1 0 1 1 1 0 CoA binding domain IlvN PF07991.12 CTQ27800.1 - 0.14 11.8 0.0 0.33 10.5 0.0 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain SNARE_assoc PF09335.11 CTQ27801.1 - 2.2e-11 44.3 7.6 2.2e-11 44.3 7.6 1.5 1 1 0 1 1 1 1 SNARE associated Golgi protein DctA-YdbH PF11739.8 CTQ27803.1 - 2.3e-63 213.7 0.1 9.7e-63 211.6 0.1 2.1 2 0 0 2 2 2 1 Dicarboxylate transport DUF748 PF05359.11 CTQ27803.1 - 0.039 14.1 0.1 0.7 10.1 0.0 3.2 4 0 0 4 4 4 0 Domain of Unknown Function (DUF748) Lipoprotein_19 PF13617.6 CTQ27804.1 - 6.3e-18 64.2 4.1 8e-18 63.9 4.1 1.1 1 0 0 1 1 1 1 YnbE-like lipoprotein DUF1318 PF07027.12 CTQ27805.1 - 7.3e-30 103.3 0.5 8.4e-30 103.1 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1318) PG_binding_3 PF09374.10 CTQ27805.1 - 0.084 13.2 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 Predicted Peptidoglycan domain AraC_binding_2 PF14525.6 CTQ27806.1 - 1e-23 83.9 1.8 1.4e-23 83.4 1.8 1.2 1 0 0 1 1 1 1 AraC-binding-like domain HTH_18 PF12833.7 CTQ27806.1 - 2.8e-22 78.8 0.1 5.7e-22 77.8 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ27806.1 - 1.8e-11 43.8 0.1 4.8e-09 36.1 0.0 2.8 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ27806.1 - 0.12 12.1 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Cupin domain Aldedh PF00171.22 CTQ27807.1 - 4e-161 536.6 0.0 4.6e-161 536.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ApbA PF02558.16 CTQ27808.1 - 2.6e-23 82.4 0.0 3.6e-23 81.9 0.0 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA ApbA_C PF08546.11 CTQ27808.1 - 7e-23 81.2 0.0 9.3e-23 80.8 0.0 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal F420_oxidored PF03807.17 CTQ27808.1 - 0.00014 22.4 0.0 0.00032 21.2 0.0 1.6 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.23 CTQ27808.1 - 0.0035 17.3 0.1 0.013 15.5 0.1 1.8 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Shikimate_DH PF01488.20 CTQ27808.1 - 0.007 16.4 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase COG7 PF10191.9 CTQ27808.1 - 0.11 10.7 0.0 0.16 10.1 0.0 1.2 1 0 0 1 1 1 0 Golgi complex component 7 (COG7) NAD_binding_2 PF03446.15 CTQ27808.1 - 0.13 12.4 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase ADH_N PF08240.12 CTQ27809.1 - 0.00021 21.2 0.0 0.00034 20.5 0.0 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 CTQ27809.1 - 0.00038 21.5 0.0 0.0013 19.8 0.0 1.9 1 1 1 2 2 2 1 Zinc-binding dehydrogenase Cu_amine_oxid PF01179.20 CTQ27810.1 - 8.9e-128 426.7 0.1 1.1e-127 426.3 0.1 1.1 1 0 0 1 1 1 1 Copper amine oxidase, enzyme domain Cu_amine_oxidN3 PF02728.16 CTQ27810.1 - 1.5e-30 105.6 0.0 1.8e-28 98.9 0.0 2.7 2 0 0 2 2 2 1 Copper amine oxidase, N3 domain Cu_amine_oxidN2 PF02727.16 CTQ27810.1 - 1.3e-28 99.0 1.0 2.3e-28 98.3 0.1 1.9 2 0 0 2 2 2 1 Copper amine oxidase, N2 domain Cu_amine_oxidN1 PF07833.11 CTQ27810.1 - 5.6e-13 49.2 0.0 1.7e-12 47.6 0.0 1.8 1 0 0 1 1 1 1 Copper amine oxidase N-terminal domain Aldedh PF00171.22 CTQ27811.1 - 1.6e-59 201.6 0.1 2e-59 201.3 0.1 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family MaoC_dehydratas PF01575.19 CTQ27811.1 - 8e-32 109.4 0.0 1.6e-31 108.5 0.0 1.4 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 CTQ27811.1 - 0.058 13.5 0.0 0.2 11.8 0.0 2.0 1 0 0 1 1 1 0 N-terminal half of MaoC dehydratase PaaA_PaaC PF05138.12 CTQ27812.1 - 1.4e-98 329.3 0.8 1.5e-98 329.1 0.8 1.0 1 0 0 1 1 1 1 Phenylacetic acid catabolic protein PaaB PF06243.11 CTQ27813.1 - 1.2e-39 134.4 0.1 1.4e-39 134.2 0.1 1.1 1 0 0 1 1 1 1 Phenylacetic acid degradation B PaaA_PaaC PF05138.12 CTQ27814.1 - 4.7e-95 317.7 0.0 5.2e-95 317.5 0.0 1.0 1 0 0 1 1 1 1 Phenylacetic acid catabolic protein DUF2399 PF09664.10 CTQ27814.1 - 0.047 13.6 0.0 0.075 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2399) PG_binding_3 PF09374.10 CTQ27814.1 - 0.05 13.9 0.2 0.13 12.6 0.2 1.7 1 0 0 1 1 1 0 Predicted Peptidoglycan domain FeS_assembly_P PF01883.19 CTQ27815.1 - 1.1e-07 31.9 0.0 3.3e-07 30.4 0.0 1.7 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein Zn_Tnp_IS1595 PF12760.7 CTQ27815.1 - 0.0051 16.8 5.3 0.015 15.3 5.5 1.7 1 1 0 1 1 1 1 Transposase zinc-ribbon domain zf-HIT PF04438.16 CTQ27815.1 - 0.011 15.6 4.2 0.62 10.0 0.1 2.4 2 0 0 2 2 2 0 HIT zinc finger Zn_ribbon_SprT PF17283.2 CTQ27815.1 - 0.085 12.8 2.9 0.19 11.7 2.9 1.6 1 0 0 1 1 1 0 SprT-like zinc ribbon domain zf-ribbon_3 PF13248.6 CTQ27815.1 - 0.088 12.2 2.0 0.26 10.8 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 CTQ27815.1 - 0.19 11.9 9.3 0.86 9.8 0.7 2.7 2 0 0 2 2 2 0 Zinc ribbon domain zinc-ribbons_6 PF07191.12 CTQ27815.1 - 0.67 10.0 5.3 4 7.5 4.9 2.0 1 1 0 1 1 1 0 zinc-ribbons Zn_Tnp_IS1 PF03811.13 CTQ27815.1 - 2 8.2 11.0 0.82 9.5 7.3 2.3 2 1 0 2 2 2 0 InsA N-terminal domain zf-Dof PF02701.15 CTQ27815.1 - 4.8 7.4 6.7 15 5.8 4.6 2.5 1 1 0 1 1 1 0 Dof domain, zinc finger NAD_binding_1 PF00175.21 CTQ27816.1 - 3.7e-18 66.1 0.0 6e-18 65.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain Fer2 PF00111.27 CTQ27816.1 - 1.1e-15 57.4 0.6 1.9e-15 56.6 0.6 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 CTQ27816.1 - 5.7e-12 45.9 0.0 9.3e-12 45.2 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 CTQ27816.1 - 0.00018 21.7 0.0 0.0016 18.6 0.0 2.0 2 0 0 2 2 2 1 Ferric reductase NAD binding domain DUF4512 PF14975.6 CTQ27816.1 - 0.077 13.8 0.0 0.14 12.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4512) ECH_1 PF00378.20 CTQ27817.1 - 6.2e-71 238.6 0.0 6.9e-71 238.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 CTQ27817.1 - 2.5e-36 125.9 1.2 4.7e-29 101.9 0.1 2.1 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Phage-MuB_C PF09077.11 CTQ27817.1 - 0.059 13.3 0.3 0.13 12.1 0.3 1.7 1 0 0 1 1 1 0 Mu B transposition protein, C terminal ECH_1 PF00378.20 CTQ27818.1 - 1.6e-60 204.5 0.0 1.8e-60 204.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 CTQ27818.1 - 1.2e-36 126.9 0.0 1.2e-34 120.3 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase 3HCDH_N PF02737.18 CTQ27819.1 - 8.7e-65 218.0 0.5 5.7e-64 215.3 0.1 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 CTQ27819.1 - 6.5e-48 161.3 0.0 5.8e-28 97.3 0.0 2.5 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 3HCDH_RFF PF18321.1 CTQ27819.1 - 5.2e-13 49.2 0.4 5.2e-13 49.2 0.4 2.7 3 1 0 3 3 3 1 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NAD_binding_2 PF03446.15 CTQ27819.1 - 6.1e-06 26.5 0.3 3.2e-05 24.1 0.2 2.2 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 CTQ27819.1 - 0.00094 19.2 0.5 0.0027 17.7 0.5 2.0 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 CTQ27819.1 - 0.012 15.2 0.4 0.026 14.1 0.4 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F420_oxidored PF03807.17 CTQ27819.1 - 0.018 15.6 1.4 0.018 15.6 1.4 2.2 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 CTQ27819.1 - 0.035 13.4 2.8 0.037 13.3 1.2 1.8 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 CTQ27819.1 - 0.06 13.6 0.5 0.06 13.6 0.5 2.7 3 1 0 3 3 3 0 TrkA-N domain MORN PF02493.20 CTQ27819.1 - 0.081 12.9 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 MORN repeat 2-Hacid_dh_C PF02826.19 CTQ27819.1 - 0.12 11.8 0.4 0.29 10.5 0.2 1.6 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 CTQ27819.1 - 0.23 12.0 0.5 0.54 10.9 0.5 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 4HBT PF03061.22 CTQ27820.1 - 5.9e-20 71.4 0.0 8.7e-20 70.9 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 CTQ27820.1 - 8.4e-05 22.7 0.0 0.00011 22.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) 4HBT_3 PF13622.6 CTQ27820.1 - 0.0043 17.3 0.2 0.0057 16.9 0.2 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily PS-DH PF14765.6 CTQ27820.1 - 0.013 14.8 0.0 0.013 14.7 0.0 1.2 1 0 0 1 1 1 0 Polyketide synthase dehydratase 4HBT_2 PF13279.6 CTQ27820.1 - 0.074 13.5 0.0 0.079 13.5 0.0 1.2 1 0 0 1 1 1 0 Thioesterase-like superfamily YiiD_C PF09500.10 CTQ27820.1 - 0.078 12.8 0.0 0.14 12.0 0.0 1.6 1 1 0 1 1 1 0 Putative thioesterase (yiiD_Cterm) Thiolase_N PF00108.23 CTQ27821.1 - 2.5e-74 249.9 0.0 3.4e-74 249.5 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 CTQ27821.1 - 3.2e-46 156.0 0.5 3.2e-46 156.0 0.5 1.6 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 CTQ27821.1 - 4.5e-05 23.1 0.0 0.00013 21.6 0.0 1.8 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain AMP-binding_C_2 PF14535.6 CTQ27822.1 - 2.1e-26 92.1 0.0 4e-26 91.1 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 CTQ27822.1 - 2.3e-15 56.1 0.0 3.8e-15 55.4 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme PaaX_C PF08223.11 CTQ27823.1 - 9.4e-30 102.8 0.1 1.5e-29 102.1 0.1 1.3 1 0 0 1 1 1 1 PaaX-like protein C-terminal domain PaaX PF07848.12 CTQ27823.1 - 4.8e-25 87.6 0.4 9.6e-25 86.6 0.4 1.5 1 0 0 1 1 1 1 PaaX-like protein DHR-2 PF06920.13 CTQ27823.1 - 0.092 11.4 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Dock homology region 2 Hexapep PF00132.24 CTQ27824.1 - 2.1e-13 49.4 15.9 1.3e-07 31.1 4.0 4.0 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 CTQ27824.1 - 1.7e-06 27.6 13.1 0.00093 18.9 4.5 3.5 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase GFA PF04828.14 CTQ27825.1 - 3.3e-09 36.9 1.7 3.3e-09 36.9 1.7 1.7 2 0 0 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme Flavodoxin_2 PF02525.17 CTQ27826.1 - 6.3e-47 159.9 0.0 7.2e-47 159.7 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 CTQ27826.1 - 2.3e-10 40.5 0.0 2.8e-10 40.1 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase DUF3418 PF11898.8 CTQ27828.1 - 2.8e-237 789.1 1.2 3.8e-237 788.7 1.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) OB_NTP_bind PF07717.16 CTQ27828.1 - 6.1e-19 68.2 0.0 1.1e-18 67.3 0.0 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold HA2 PF04408.23 CTQ27828.1 - 3.9e-18 65.7 0.0 9.2e-18 64.5 0.0 1.6 1 0 0 1 1 1 1 Helicase associated domain (HA2) Helicase_C PF00271.31 CTQ27828.1 - 5.1e-11 42.9 0.0 2.3e-10 40.8 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 CTQ27828.1 - 5e-06 26.4 0.0 1.3e-05 25.1 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_19 PF13245.6 CTQ27828.1 - 0.00014 22.2 0.7 0.00038 20.8 0.0 2.1 3 0 0 3 3 2 1 AAA domain T2SSE PF00437.20 CTQ27828.1 - 0.00015 20.9 0.0 0.00031 19.9 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 CTQ27828.1 - 0.00016 21.9 0.0 0.00076 19.8 0.0 2.2 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 CTQ27828.1 - 0.0092 15.3 0.0 0.032 13.5 0.0 1.8 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 CTQ27828.1 - 0.014 15.1 0.0 0.03 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ27828.1 - 0.026 14.4 3.9 0.023 14.6 0.7 2.5 2 1 0 2 2 1 0 NACHT domain PhoH PF02562.16 CTQ27828.1 - 0.034 13.6 0.0 0.089 12.2 0.0 1.7 1 0 0 1 1 1 0 PhoH-like protein ResIII PF04851.15 CTQ27828.1 - 0.042 13.8 0.0 12 5.9 0.0 2.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_23 PF13476.6 CTQ27828.1 - 0.36 11.3 1.1 0.78 10.2 0.0 2.2 3 0 0 3 3 1 0 AAA domain Methyltransf_3 PF01596.17 CTQ27829.1 - 9.2e-41 139.3 0.0 1.1e-40 139.1 0.0 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 CTQ27829.1 - 1.1e-15 58.5 0.0 2e-15 57.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ27829.1 - 9.9e-08 31.9 0.0 1.4e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 CTQ27829.1 - 9.7e-07 28.7 0.0 1.1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 CTQ27829.1 - 0.0026 18.4 0.0 0.0046 17.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 CTQ27829.1 - 0.0031 17.2 0.0 0.0042 16.8 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Cons_hypoth95 PF03602.15 CTQ27829.1 - 0.033 13.8 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 CTQ27829.1 - 0.13 12.2 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_15 PF09445.10 CTQ27829.1 - 0.18 11.4 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase OEP PF02321.18 CTQ27830.1 - 6.1e-45 153.3 37.7 2e-23 83.2 14.8 2.1 2 0 0 2 2 2 2 Outer membrane efflux protein YkyA PF10368.9 CTQ27830.1 - 0.00065 19.4 2.3 0.0013 18.4 2.3 1.5 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein CsoSCA PF08936.10 CTQ27830.1 - 0.0099 14.6 0.2 0.019 13.6 0.2 1.5 1 0 0 1 1 1 1 Carboxysome Shell Carbonic Anhydrase DUF16 PF01519.16 CTQ27830.1 - 0.023 15.2 2.1 0.3 11.6 0.3 2.6 2 1 0 2 2 2 0 Protein of unknown function DUF16 MLTD_N PF06474.12 CTQ27830.1 - 0.068 13.4 0.3 0.17 12.1 0.3 1.7 1 0 0 1 1 1 0 MltD lipid attachment motif Jnk-SapK_ap_N PF09744.9 CTQ27830.1 - 2.6 8.3 8.1 1.8 8.8 1.2 2.3 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 HlyD_3 PF13437.6 CTQ27831.1 - 9.7e-18 64.8 4.2 1.2e-14 54.9 0.4 2.7 2 0 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 CTQ27831.1 - 2.3e-17 63.0 11.3 5.2e-14 52.0 8.6 3.2 2 1 0 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 CTQ27831.1 - 1.8e-12 46.9 0.5 2.4e-12 46.6 0.5 1.3 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl_2 PF13533.6 CTQ27831.1 - 1e-10 41.2 13.9 1.2e-10 41.1 0.3 4.0 4 0 0 4 4 4 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 CTQ27831.1 - 0.014 15.2 0.2 9.1 6.2 0.0 2.9 3 0 0 3 3 3 0 Biotin-requiring enzyme DivIC PF04977.15 CTQ27831.1 - 7.2 6.5 10.5 2.2 8.1 3.7 3.2 3 1 1 4 4 4 0 Septum formation initiator MFS_1 PF07690.16 CTQ27832.1 - 1.3e-08 34.2 43.8 1.3e-08 34.2 43.8 2.9 2 1 0 2 2 2 1 Major Facilitator Superfamily DUF3546 PF12066.8 CTQ27832.1 - 0.27 11.5 0.0 0.45 10.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3546) IncD PF17628.2 CTQ27832.1 - 5.3 6.8 9.8 2.4 8.0 0.1 3.6 3 1 1 4 4 4 0 Inclusion membrane protein D MarR_2 PF12802.7 CTQ27833.1 - 3.9e-11 42.7 0.2 9.7e-11 41.4 0.2 1.7 1 0 0 1 1 1 1 MarR family MarR PF01047.22 CTQ27833.1 - 7.8e-11 41.7 0.0 1.5e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 CTQ27833.1 - 2.6e-09 37.4 0.2 7e-09 36.1 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 CTQ27833.1 - 4.5e-07 29.6 0.7 8.8e-07 28.6 0.2 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain GntR PF00392.21 CTQ27833.1 - 3.5e-05 23.4 1.7 0.0005 19.7 0.2 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 CTQ27833.1 - 0.00019 21.2 0.1 0.00086 19.1 0.0 2.0 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB SMC_ScpB PF04079.16 CTQ27833.1 - 0.00019 21.1 2.7 0.00061 19.4 0.2 2.0 1 1 1 2 2 2 1 Segregation and condensation complex subunit ScpB HTH_11 PF08279.12 CTQ27833.1 - 0.0032 17.4 0.0 0.0077 16.2 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.6 CTQ27833.1 - 0.0033 17.3 0.2 0.0033 17.3 0.2 1.9 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain Dimerisation2 PF16864.5 CTQ27833.1 - 0.0098 15.9 0.0 0.017 15.1 0.0 1.5 1 1 0 1 1 1 1 Dimerisation domain Rrf2 PF02082.20 CTQ27833.1 - 0.014 15.8 0.4 0.053 13.9 0.0 2.0 2 0 0 2 2 2 0 Transcriptional regulator LexA_DNA_bind PF01726.16 CTQ27833.1 - 0.017 14.9 0.0 0.047 13.5 0.0 1.7 1 0 0 1 1 1 0 LexA DNA binding domain HTH_24 PF13412.6 CTQ27833.1 - 0.018 14.6 0.2 0.46 10.1 0.0 2.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_45 PF14947.6 CTQ27833.1 - 0.018 15.0 0.1 0.052 13.5 0.0 1.8 1 1 1 2 2 2 0 Winged helix-turn-helix Fe_dep_repress PF01325.19 CTQ27833.1 - 0.025 14.8 0.0 0.061 13.5 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Dimerisation PF08100.11 CTQ27833.1 - 0.03 14.3 0.5 0.1 12.6 0.1 2.0 2 1 1 3 3 3 0 Dimerisation domain HTH_37 PF13744.6 CTQ27833.1 - 0.035 14.1 0.1 0.28 11.2 0.1 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain PadR PF03551.14 CTQ27833.1 - 0.045 13.7 0.0 0.089 12.8 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family YdaS_antitoxin PF15943.5 CTQ27833.1 - 0.053 13.4 0.0 0.098 12.5 0.0 1.5 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HxlR PF01638.17 CTQ27833.1 - 0.087 12.7 1.6 0.25 11.2 0.1 2.1 1 1 1 2 2 2 0 HxlR-like helix-turn-helix HTH_36 PF13730.6 CTQ27833.1 - 0.09 12.8 0.0 0.21 11.5 0.0 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.7 CTQ27833.1 - 0.13 12.3 1.6 0.26 11.4 0.5 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain B-block_TFIIIC PF04182.12 CTQ27833.1 - 0.14 12.4 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC LysR_substrate PF03466.20 CTQ27834.1 - 1.3e-29 103.1 0.0 1.9e-29 102.5 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27834.1 - 3.7e-19 68.4 0.7 8.2e-19 67.3 0.3 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_28 PF13518.6 CTQ27834.1 - 0.0011 19.1 0.0 0.0018 18.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_30 PF13556.6 CTQ27834.1 - 0.0027 17.5 0.1 0.0051 16.6 0.1 1.4 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain MarR PF01047.22 CTQ27834.1 - 0.033 14.1 0.0 0.059 13.3 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_24 PF13412.6 CTQ27834.1 - 0.045 13.3 0.1 0.1 12.2 0.1 1.6 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ27834.1 - 0.1 12.5 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF2089 PF09862.9 CTQ27834.1 - 0.18 11.8 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) Aldo_ket_red PF00248.21 CTQ27835.1 - 7.6e-79 264.9 0.0 9.4e-79 264.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family ELFV_dehydrog PF00208.21 CTQ27836.1 - 1.6e-73 247.5 0.3 2e-73 247.1 0.3 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 CTQ27836.1 - 1e-54 183.9 0.0 1.9e-54 183.0 0.0 1.5 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 CTQ27836.1 - 8.2e-05 22.0 0.4 0.00015 21.2 0.4 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 CTQ27836.1 - 0.015 14.6 0.4 0.025 13.9 0.4 1.2 1 0 0 1 1 1 0 ThiF family Ad_Cy_reg PF16701.5 CTQ27836.1 - 0.072 12.8 0.1 3 7.5 0.0 2.4 2 0 0 2 2 2 0 Adenylate cyclase regulatory domain AdoHcyase_NAD PF00670.21 CTQ27836.1 - 0.081 13.0 0.2 0.19 11.8 0.2 1.6 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_7 PF13241.6 CTQ27836.1 - 0.099 13.1 0.2 0.17 12.3 0.2 1.6 1 1 0 1 1 1 0 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 CTQ27836.1 - 0.16 11.2 1.5 0.29 10.4 1.5 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Aminotran_3 PF00202.21 CTQ27837.1 - 4.4e-121 404.4 0.0 5.4e-121 404.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 CTQ27837.1 - 0.019 14.2 0.1 0.052 12.7 0.1 1.7 1 1 0 1 1 1 0 Aminotransferase class I and II Aminotran_5 PF00266.19 CTQ27837.1 - 0.023 13.7 0.0 0.043 12.8 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 CTQ27837.1 - 0.058 12.7 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family AstA PF04958.12 CTQ27838.1 - 5.2e-132 439.5 0.0 5.9e-132 439.3 0.0 1.0 1 0 0 1 1 1 1 Arginine N-succinyltransferase beta subunit Aldedh PF00171.22 CTQ27839.1 - 1.8e-117 392.7 0.0 2.2e-117 392.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family AstB PF04996.12 CTQ27840.1 - 6.2e-218 723.8 0.7 7e-218 723.7 0.7 1.0 1 0 0 1 1 1 1 Succinylarginine dihydrolase IFP_35_N PF07334.13 CTQ27840.1 - 0.18 11.9 0.0 0.41 10.8 0.0 1.5 1 0 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus AstE_AspA PF04952.14 CTQ27841.1 - 2.5e-53 181.0 0.3 3.1e-53 180.7 0.3 1.1 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Peptidase_M14 PF00246.24 CTQ27841.1 - 0.26 11.0 0.0 0.55 10.0 0.0 1.4 1 0 0 1 1 1 0 Zinc carboxypeptidase AA_permease PF00324.21 CTQ27842.1 - 7.5e-92 308.4 46.3 9.2e-92 308.1 46.3 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ27842.1 - 4.3e-42 144.4 52.8 4.8e-42 144.3 52.8 1.0 1 0 0 1 1 1 1 Amino acid permease Aa_trans PF01490.18 CTQ27842.1 - 0.0096 14.7 35.4 0.018 13.7 35.4 1.5 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein CoatB PF10389.9 CTQ27842.1 - 3.2 7.7 8.5 0.26 11.1 2.3 2.6 2 0 0 2 2 2 0 Bacteriophage coat protein B Sugar_tr PF00083.24 CTQ27843.1 - 9.9e-29 100.5 25.8 9.2e-25 87.4 8.1 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 CTQ27843.1 - 5.4e-27 94.6 45.8 3.9e-16 58.9 17.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily PgpA PF04608.13 CTQ27843.1 - 0.2 11.7 0.1 0.2 11.7 0.1 3.8 2 1 1 3 3 3 0 Phosphatidylglycerophosphatase A DUF218 PF02698.17 CTQ27844.1 - 1.8e-14 53.9 0.0 2.5e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 DUF218 domain Aldedh PF00171.22 CTQ27845.1 - 1.3e-164 548.1 0.4 1.5e-164 548.0 0.4 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 CTQ27845.1 - 0.075 12.5 0.1 0.16 11.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) Gp_dh_C PF02800.20 CTQ27846.1 - 1.1e-58 197.3 0.1 1.6e-58 196.8 0.1 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 CTQ27846.1 - 4.4e-35 120.1 0.0 1.1e-34 118.8 0.0 1.7 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 CTQ27846.1 - 0.021 14.2 0.0 0.049 13.0 0.0 1.6 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 CTQ27846.1 - 0.021 15.4 0.6 0.11 13.2 0.0 2.4 3 1 0 3 3 3 0 Homoserine dehydrogenase, NAD binding domain Pmp3 PF01679.17 CTQ27847.1 - 7.2e-18 64.5 8.0 7.5e-18 64.5 8.0 1.0 1 0 0 1 1 1 1 Proteolipid membrane potential modulator DUF2273 PF10031.9 CTQ27847.1 - 0.02 14.9 9.6 0.13 12.3 1.5 2.1 1 1 1 2 2 2 0 Small integral membrane protein (DUF2273) DUF1398 PF07166.11 CTQ27848.1 - 1.6e-46 157.2 0.6 1.8e-46 157.0 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1398) TusA PF01206.17 CTQ27849.1 - 2.9e-19 68.7 0.0 3.2e-19 68.5 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 CTQ27849.1 - 0.034 14.0 0.0 0.087 12.7 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) Sulf_transp PF04143.14 CTQ27850.1 - 1.3e-47 162.9 36.2 3.8e-25 89.1 16.4 2.3 2 0 0 2 2 2 2 Sulphur transport DUF4073 PF13285.6 CTQ27850.1 - 0.058 13.0 0.4 0.091 12.4 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4073) DUF1304 PF06993.12 CTQ27851.1 - 1.8e-41 140.5 10.2 2.1e-41 140.3 10.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1304) FA_desaturase PF00487.24 CTQ27851.1 - 3.3 7.5 9.4 4.7 7.0 9.4 1.4 1 1 0 1 1 1 0 Fatty acid desaturase DUF4451 PF14616.6 CTQ27852.1 - 0.066 13.4 0.1 0.098 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4451) YdfZ PF14001.6 CTQ27853.1 - 5.3e-36 122.9 0.1 5.8e-36 122.7 0.1 1.0 1 0 0 1 1 1 1 YdfZ protein CorA PF01544.18 CTQ27855.1 - 8.7e-48 163.1 2.3 1e-47 162.8 2.3 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein MscS_TM PF12794.7 CTQ27855.1 - 0.0082 15.0 1.6 0.046 12.6 0.1 2.2 2 0 0 2 2 2 1 Mechanosensitive ion channel inner membrane domain 1 Aminotran_1_2 PF00155.21 CTQ27856.1 - 2e-54 185.2 0.0 2.2e-54 185.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 CTQ27856.1 - 0.00033 20.1 0.0 0.00052 19.4 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 CTQ27856.1 - 0.0044 16.0 0.0 0.011 14.7 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 CTQ27856.1 - 0.0093 14.5 0.0 0.013 14.0 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme PTS_EIIC PF02378.18 CTQ27857.1 - 2.7e-85 286.3 29.0 4.6e-85 285.5 29.0 1.4 1 0 0 1 1 1 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ27857.1 - 2e-16 59.1 0.2 5.4e-16 57.8 0.2 1.7 1 0 0 1 1 1 1 phosphotransferase system, EIIB Peripla_BP_1 PF00532.21 CTQ27858.1 - 5.5e-74 249.1 0.0 8.6e-74 248.4 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ27858.1 - 7.8e-20 71.8 0.1 4.1e-19 69.5 0.1 2.2 2 1 0 2 2 2 1 Periplasmic binding protein-like domain LacI PF00356.21 CTQ27858.1 - 1.4e-18 66.4 0.2 3.3e-18 65.2 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ27858.1 - 4.1e-17 62.6 0.0 6e-17 62.1 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_3 PF01381.22 CTQ27858.1 - 0.003 17.6 0.1 0.003 17.6 0.1 2.5 3 0 0 3 3 3 1 Helix-turn-helix HTH_7 PF02796.15 CTQ27858.1 - 0.037 14.1 0.5 1.3 9.2 0.1 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase DUF945 PF06097.11 CTQ27859.1 - 3e-133 445.3 18.3 3.5e-133 445.1 18.3 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF945) GspL_C PF12693.7 CTQ27859.1 - 0.073 12.9 5.2 0.35 10.7 0.3 3.7 3 1 1 4 4 4 0 GspL periplasmic domain PMI_typeI PF01238.21 CTQ27860.1 - 6.6e-108 361.2 0.0 9.5e-108 360.7 0.0 1.2 1 0 0 1 1 1 1 Phosphomannose isomerase type I Cupin_2 PF07883.11 CTQ27860.1 - 2.9e-05 23.7 0.0 0.0026 17.5 0.0 2.4 2 0 0 2 2 2 1 Cupin domain Cupin_6 PF12852.7 CTQ27860.1 - 0.033 13.9 0.1 0.41 10.4 0.0 2.3 2 0 0 2 2 2 0 Cupin AraC_binding_2 PF14525.6 CTQ27860.1 - 0.059 13.0 1.1 0.082 12.6 0.1 1.7 2 0 0 2 2 2 0 AraC-binding-like domain Fumerase_C PF05683.12 CTQ27861.1 - 1.4e-88 295.6 0.0 2.2e-88 294.9 0.0 1.4 1 0 0 1 1 1 1 Fumarase C-terminus Fumerase PF05681.14 CTQ27861.1 - 1.3e-85 287.1 0.0 1.7e-85 286.8 0.0 1.1 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) Myosin_head PF00063.21 CTQ27861.1 - 0.14 10.3 0.0 0.2 9.8 0.0 1.1 1 0 0 1 1 1 0 Myosin head (motor domain) MobB PF03205.14 CTQ27862.1 - 3.4e-48 162.9 0.0 4e-48 162.7 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 CTQ27862.1 - 0.012 15.2 0.0 0.015 14.9 0.0 1.5 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 CTQ27862.1 - 0.014 15.7 0.1 0.02 15.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain PRK PF00485.18 CTQ27862.1 - 0.1 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NTP_transf_3 PF12804.7 CTQ27863.1 - 4e-36 124.8 0.2 5.1e-36 124.4 0.2 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF1040 PF06288.13 CTQ27864.1 - 2.1e-46 156.2 0.5 2.4e-46 156.0 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) APH PF01636.23 CTQ27865.1 - 2.1e-43 149.0 4.2 2.1e-43 149.0 4.2 1.7 1 1 1 2 2 2 1 Phosphotransferase enzyme family EcKinase PF02958.20 CTQ27865.1 - 0.0096 15.3 0.0 0.023 14.0 0.0 1.5 1 1 0 1 1 1 1 Ecdysteroid kinase DSBA PF01323.20 CTQ27866.1 - 6.3e-29 101.1 5.3 5.4e-28 98.1 5.3 1.9 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 CTQ27866.1 - 9.7e-10 38.9 0.0 1.4e-09 38.3 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin PF00085.20 CTQ27866.1 - 0.0039 17.2 0.5 0.26 11.3 0.2 2.5 2 1 0 2 2 2 1 Thioredoxin Lpp-LpqN PF10738.9 CTQ27866.1 - 0.011 15.2 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 Probable lipoprotein LpqN DUF3088 PF11287.8 CTQ27866.1 - 0.018 14.8 0.0 0.097 12.5 0.0 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3088) Acyltransferase PF01553.21 CTQ27867.1 - 9.2e-13 48.0 0.0 1.2e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase DNA_pol_A PF00476.20 CTQ27868.1 - 1.2e-159 531.4 0.0 1.7e-159 530.9 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family A 5_3_exonuc_N PF02739.16 CTQ27868.1 - 1.7e-54 184.0 0.0 3.4e-54 183.0 0.0 1.5 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain DNA_pol_A_exo1 PF01612.20 CTQ27868.1 - 1.1e-42 145.8 0.1 1.9e-42 145.0 0.1 1.4 1 0 0 1 1 1 1 3'-5' exonuclease 5_3_exonuc PF01367.20 CTQ27868.1 - 5.5e-31 107.0 0.0 1.6e-30 105.6 0.0 1.9 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold HHH PF00633.23 CTQ27868.1 - 0.009 15.8 1.2 0.038 13.9 0.1 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix motif Prok-E2_E PF14462.6 CTQ27868.1 - 0.036 13.9 0.0 0.083 12.7 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic E2 family E HHH_5 PF14520.6 CTQ27868.1 - 0.038 14.6 0.0 0.14 12.8 0.0 2.0 1 0 0 1 1 1 0 Helix-hairpin-helix domain HHH_2 PF12826.7 CTQ27868.1 - 0.08 13.0 0.0 0.26 11.4 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix motif XPG_N PF00752.17 CTQ27868.1 - 0.12 12.9 0.0 0.54 10.8 0.0 2.1 2 0 0 2 2 2 0 XPG N-terminal domain MMR_HSR1 PF01926.23 CTQ27869.1 - 6.5e-20 71.3 0.0 9.3e-20 70.8 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 CTQ27869.1 - 6e-09 36.0 0.1 0.00018 21.4 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 CTQ27869.1 - 3.5e-06 26.6 0.1 5.8e-06 25.9 0.1 1.4 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 CTQ27869.1 - 0.00032 20.3 0.2 0.006 16.1 0.1 2.1 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 CTQ27869.1 - 0.001 19.1 0.0 0.19 11.8 0.1 2.3 1 1 1 2 2 2 2 Dynamin family SRPRB PF09439.10 CTQ27869.1 - 0.046 13.2 0.0 0.12 11.8 0.0 1.7 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit Septin PF00735.18 CTQ27869.1 - 0.05 12.9 0.1 4.1 6.6 0.0 2.1 2 0 0 2 2 2 0 Septin YihI PF04220.12 CTQ27870.1 - 1.1e-55 187.6 14.8 1.3e-55 187.4 14.8 1.0 1 0 0 1 1 1 1 Der GTPase activator (YihI) Radical_SAM PF04055.21 CTQ27871.1 - 2.6e-18 66.9 0.0 4.8e-18 66.1 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily HemN_C PF06969.16 CTQ27871.1 - 4.8e-10 39.3 0.0 2.2e-09 37.2 0.0 2.3 1 0 0 1 1 1 1 HemN C-terminal domain Sigma54_activat PF00158.26 CTQ27872.1 - 8.9e-71 237.0 0.0 1.3e-70 236.4 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain Response_reg PF00072.24 CTQ27872.1 - 7.1e-31 106.7 0.0 1.4e-30 105.7 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Sigma54_activ_2 PF14532.6 CTQ27872.1 - 5e-24 85.0 0.0 2.7e-23 82.6 0.0 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 CTQ27872.1 - 7.7e-17 60.8 2.8 2e-15 56.3 1.5 2.5 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 CTQ27872.1 - 1.7e-08 34.6 0.0 3.9e-08 33.4 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 CTQ27872.1 - 1.8e-05 24.9 0.0 3.1e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 CTQ27872.1 - 0.0014 19.1 0.0 0.0039 17.6 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 CTQ27872.1 - 0.01 15.2 0.1 1 8.7 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 CTQ27872.1 - 0.022 14.3 0.0 0.1 12.1 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region MCM PF00493.23 CTQ27872.1 - 0.068 12.2 0.0 0.16 11.0 0.0 1.5 1 1 0 1 1 1 0 MCM P-loop domain AAA_16 PF13191.6 CTQ27872.1 - 0.085 13.2 0.5 0.23 11.8 0.1 2.1 1 1 0 1 1 1 0 AAA ATPase domain FleQ PF06490.11 CTQ27872.1 - 0.12 12.8 0.0 0.4 11.1 0.0 1.9 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ HATPase_c PF02518.26 CTQ27873.1 - 1.1e-17 64.5 0.0 2e-17 63.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ27873.1 - 3.7e-14 52.5 0.3 2e-13 50.1 0.0 2.4 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 CTQ27873.1 - 9.8e-06 25.5 0.0 2.8e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 CTQ27873.1 - 0.00022 21.5 0.0 0.00048 20.3 0.0 1.7 1 1 0 1 1 1 1 PAS fold PAS_8 PF13188.7 CTQ27873.1 - 0.00043 20.2 0.0 0.0014 18.6 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 CTQ27873.1 - 0.00065 19.9 0.0 0.0013 18.9 0.0 1.5 1 0 0 1 1 1 1 PAS domain DUF1688 PF07958.11 CTQ27873.1 - 0.02 13.6 0.1 0.03 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1688) Gln-synt_C PF00120.24 CTQ27874.1 - 2.4e-138 460.9 0.0 2.9e-138 460.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 CTQ27874.1 - 1.9e-32 110.9 0.1 3.6e-32 109.9 0.1 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain GTP_EFTU PF00009.27 CTQ27875.1 - 3e-57 193.3 0.1 5.1e-57 192.6 0.1 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 CTQ27875.1 - 4.7e-22 77.8 0.0 1.4e-21 76.3 0.0 1.8 2 0 0 2 2 2 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 CTQ27875.1 - 2e-11 44.1 4.5 4e-11 43.2 3.8 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CTQ27875.1 - 3.4e-07 30.3 0.4 1.7e-06 28.1 0.1 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase EFG_II PF14492.6 CTQ27875.1 - 3.6e-05 23.8 0.5 0.00012 22.1 0.1 2.1 3 0 0 3 3 3 1 Elongation Factor G, domain II Septin PF00735.18 CTQ27875.1 - 0.00083 18.7 0.1 0.0013 18.0 0.1 1.2 1 0 0 1 1 1 1 Septin FeoB_N PF02421.18 CTQ27875.1 - 0.016 14.7 0.0 0.21 11.1 0.0 2.9 2 1 0 2 2 2 0 Ferrous iron transport protein B Dynamin_N PF00350.23 CTQ27875.1 - 0.06 13.4 0.1 0.57 10.2 0.0 2.3 2 1 1 3 3 3 0 Dynamin family SRPRB PF09439.10 CTQ27875.1 - 0.09 12.2 0.1 0.26 10.7 0.1 1.7 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Roc PF08477.13 CTQ27875.1 - 0.17 12.1 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase HAD_2 PF13419.6 CTQ27876.1 - 2.7e-10 40.6 0.0 4.1e-10 40.0 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ27876.1 - 6.2e-08 33.2 0.0 2.2e-07 31.4 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ27876.1 - 1.5e-06 28.1 0.0 4e-06 26.8 0.0 1.7 2 0 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 CTQ27876.1 - 0.00015 22.2 0.4 0.00036 21.0 0.2 1.7 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Acid_PPase PF12689.7 CTQ27876.1 - 0.00042 20.2 0.0 0.0044 16.9 0.0 2.1 1 1 0 1 1 1 1 Acid Phosphatase PerC PF06069.11 CTQ27876.1 - 0.052 13.8 0.0 0.092 13.0 0.0 1.5 1 0 0 1 1 1 0 PerC transcriptional activator SHOCT PF09851.9 CTQ27876.1 - 0.1 12.3 0.0 0.38 10.5 0.0 1.8 2 0 0 2 2 2 0 Short C-terminal domain TrmB PF01978.19 CTQ27876.1 - 0.12 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB PNK3P PF08645.11 CTQ27876.1 - 0.12 12.1 0.0 0.34 10.6 0.0 1.9 1 1 0 1 1 1 0 Polynucleotide kinase 3 phosphatase Virul_fac_BrkB PF03631.15 CTQ27877.1 - 7.6e-57 192.9 26.2 9e-57 192.6 26.2 1.0 1 0 0 1 1 1 1 Virulence factor BrkB SpoIIIAC PF06686.11 CTQ27877.1 - 4.3 7.6 7.4 3.7 7.8 0.1 2.8 3 0 0 3 3 3 0 Stage III sporulation protein AC/AD protein family Tyr_Deacylase PF02580.16 CTQ27878.1 - 6.3e-55 185.7 0.0 7.7e-55 185.4 0.0 1.0 1 0 0 1 1 1 1 D-Tyr-tRNA(Tyr) deacylase YiiD_C PF09500.10 CTQ27879.1 - 3.6e-47 159.8 0.0 5.1e-47 159.3 0.0 1.2 1 0 0 1 1 1 1 Putative thioesterase (yiiD_Cterm) Acetyltransf_1 PF00583.25 CTQ27879.1 - 9.4e-14 51.7 0.0 1.4e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ27879.1 - 6.5e-13 48.7 0.0 1.1e-12 48.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ27879.1 - 1.3e-07 31.9 0.0 2.5e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_5 PF13444.6 CTQ27879.1 - 0.00046 20.9 0.0 0.00078 20.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ27879.1 - 0.0018 18.2 0.0 0.004 17.1 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein DUF4442 PF14539.6 CTQ27879.1 - 0.0032 17.6 0.0 0.006 16.7 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) Acetyltransf_4 PF13420.7 CTQ27879.1 - 0.0079 16.3 0.0 0.014 15.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain ATE_C PF04377.15 CTQ27879.1 - 0.099 13.3 0.0 0.17 12.5 0.0 1.3 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, C terminus Abhydrolase_3 PF07859.13 CTQ27880.1 - 1.6e-66 224.2 0.3 2.2e-66 223.8 0.3 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 CTQ27880.1 - 2.2e-06 26.8 0.1 8.4e-06 24.9 0.1 1.7 1 1 0 1 1 1 1 Carboxylesterase family Say1_Mug180 PF10340.9 CTQ27880.1 - 2.5e-05 23.3 0.0 3.9e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Steryl acetyl hydrolase AXE1 PF05448.12 CTQ27880.1 - 0.0048 15.6 0.0 0.061 12.0 0.0 2.0 2 0 0 2 2 2 1 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 CTQ27880.1 - 0.011 15.2 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family Thioesterase PF00975.20 CTQ27880.1 - 0.015 15.4 0.3 0.027 14.6 0.3 1.4 1 0 0 1 1 1 0 Thioesterase domain Chlorophyllase2 PF12740.7 CTQ27880.1 - 0.018 14.0 0.0 0.031 13.2 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase enzyme Sel_put PF04328.13 CTQ27880.1 - 0.02 14.9 0.0 0.038 14.0 0.0 1.4 1 0 0 1 1 1 0 Selenoprotein, putative DLH PF01738.18 CTQ27880.1 - 0.074 12.6 0.0 1.8 8.0 0.0 2.2 1 1 1 2 2 2 0 Dienelactone hydrolase family Esterase PF00756.20 CTQ27880.1 - 0.12 12.1 0.5 0.24 11.0 0.2 1.6 2 0 0 2 2 2 0 Putative esterase Lipase_3 PF01764.25 CTQ27880.1 - 0.14 12.0 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) RHH_3 PF12651.7 CTQ27881.1 - 5.9e-06 26.1 0.5 7.9e-06 25.7 0.5 1.2 1 0 0 1 1 1 1 Ribbon-helix-helix domain RHH_1 PF01402.21 CTQ27881.1 - 2.2e-05 24.2 1.7 3.4e-05 23.6 1.7 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family VAPB_antitox PF02697.14 CTQ27881.1 - 0.11 13.3 0.6 0.64 10.8 0.6 1.9 1 1 0 1 1 1 0 Putative antitoxin PIN PF01850.21 CTQ27882.1 - 4.2e-19 69.2 0.0 4.6e-19 69.1 0.0 1.0 1 0 0 1 1 1 1 PIN domain DUF4411 PF14367.6 CTQ27882.1 - 0.0034 17.3 0.2 0.0066 16.4 0.1 1.6 1 1 1 2 2 2 1 Domain of unknown function (DUF4411) DUF5615 PF18480.1 CTQ27882.1 - 0.014 15.1 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) Porphobil_deam PF01379.20 CTQ27882.1 - 0.037 13.5 0.0 0.039 13.5 0.0 1.1 1 0 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain PIN_12 PF16289.5 CTQ27882.1 - 0.069 13.7 0.0 3.5 8.1 0.0 2.1 1 1 1 2 2 2 0 PIN domain FdhE PF04216.12 CTQ27883.1 - 9.8e-117 389.9 0.5 1.1e-116 389.7 0.5 1.0 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation DZR PF12773.7 CTQ27883.1 - 0.012 15.7 7.7 0.62 10.1 3.8 2.8 1 1 1 2 2 2 0 Double zinc ribbon Elf1 PF05129.13 CTQ27883.1 - 0.07 13.2 4.6 1.2 9.2 1.4 2.8 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zf-ribbon_3 PF13248.6 CTQ27883.1 - 0.08 12.4 5.5 0.68 9.4 0.1 3.3 3 0 0 3 3 3 0 zinc-ribbon domain Stc1 PF12898.7 CTQ27883.1 - 0.11 13.1 3.7 0.19 12.3 3.7 1.5 1 0 0 1 1 1 0 Stc1 domain Zn_Tnp_IS1595 PF12760.7 CTQ27883.1 - 0.18 11.8 5.5 0.45 10.5 0.2 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 CTQ27883.1 - 0.63 10.5 6.5 15 6.0 6.5 2.8 1 1 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_6 PF14599.6 CTQ27883.1 - 1 9.5 5.2 1.1 9.4 1.9 2.5 2 0 0 2 2 2 0 Zinc-ribbon zinc_ribbon_15 PF17032.5 CTQ27883.1 - 1.9 9.3 5.7 4.5 8.1 5.7 1.7 1 1 1 2 2 2 0 zinc-ribbon family HypA PF01155.19 CTQ27883.1 - 6.8 6.8 9.4 31 4.7 5.8 2.8 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-IS66 PF13005.7 CTQ27883.1 - 7.7 7.0 8.4 70 3.9 5.1 2.9 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 Ni_hydr_CYTB PF01292.20 CTQ27884.1 - 1e-22 80.6 19.3 1.3e-22 80.2 19.3 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 CTQ27884.1 - 3.2e-05 24.4 30.4 0.0021 18.6 13.5 2.5 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) PapJ PF14855.6 CTQ27884.1 - 0.087 12.5 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Pilus-assembly fibrillin subunit, chaperone PepSY_TM PF03929.16 CTQ27884.1 - 0.25 11.0 20.2 0.012 15.3 8.8 2.1 1 1 1 2 2 2 0 PepSY-associated TM region DUF4179 PF13786.6 CTQ27884.1 - 5.7 7.5 10.0 28 5.3 0.8 3.3 2 2 1 3 3 3 0 Domain of unknown function (DUF4179) Fer4_11 PF13247.6 CTQ27885.1 - 3.6e-25 88.0 7.8 3.6e-25 88.0 7.8 1.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Form-deh_trans PF09163.11 CTQ27885.1 - 1.4e-21 76.0 0.2 2.9e-21 75.0 0.2 1.5 1 0 0 1 1 1 1 Formate dehydrogenase N, transmembrane Fer4_7 PF12838.7 CTQ27885.1 - 3.3e-15 56.4 22.0 5.8e-08 33.2 5.3 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ27885.1 - 2.3e-12 46.9 22.8 6.8e-06 26.2 9.2 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ27885.1 - 1.8e-11 43.9 25.8 1.2e-06 28.5 10.5 3.5 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ27885.1 - 2.8e-08 33.5 33.9 0.0004 20.3 2.8 4.9 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_21 PF14697.6 CTQ27885.1 - 2.8e-07 30.5 27.0 5.4e-06 26.4 7.5 3.7 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 CTQ27885.1 - 5.9e-07 29.0 36.4 8.1e-05 22.3 2.7 5.4 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_2 PF12797.7 CTQ27885.1 - 3.5e-06 26.8 29.4 0.014 15.4 2.8 4.4 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.6 CTQ27885.1 - 0.0001 23.2 25.5 0.31 12.0 0.0 5.0 2 1 3 6 6 6 1 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 CTQ27885.1 - 0.00031 21.5 39.2 0.37 11.8 3.4 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_17 PF13534.6 CTQ27885.1 - 0.00031 21.2 24.1 0.49 11.0 4.3 4.1 1 1 3 5 5 5 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ27885.1 - 0.00036 20.8 33.5 0.048 14.2 3.5 4.5 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_22 PF17179.4 CTQ27885.1 - 0.0017 19.2 11.6 0.1 13.4 0.7 3.8 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ27885.1 - 0.0023 18.3 27.3 0.045 14.2 7.5 3.9 2 2 0 2 2 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 CTQ27885.1 - 0.0098 16.6 13.2 0.15 12.8 0.3 3.7 2 1 0 2 2 2 1 4Fe-4S single cluster domain Fer4_20 PF14691.6 CTQ27885.1 - 0.024 14.4 0.4 0.024 14.4 0.4 4.0 3 1 1 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_13 PF13370.6 CTQ27885.1 - 0.034 14.7 0.6 0.034 14.7 0.6 4.1 3 1 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 CTQ27885.1 - 0.059 13.6 23.0 0.11 12.7 3.8 4.0 2 1 2 4 4 4 0 4Fe-4S dicluster domain Molybdopterin PF00384.22 CTQ27886.1 - 7.9e-22 77.8 0.0 7.6e-21 74.6 0.0 2.1 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ27886.1 - 5.4e-17 61.8 0.0 1.4e-16 60.5 0.0 1.7 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 CTQ27887.1 - 1.7e-19 69.5 0.2 4.3e-19 68.3 0.1 1.7 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain Molybdopterin PF00384.22 CTQ27887.1 - 2.8e-06 26.6 0.1 3.7e-06 26.2 0.1 1.3 1 1 0 1 1 1 1 Molybdopterin oxidoreductase TAT_signal PF10518.9 CTQ27887.1 - 0.0063 16.3 5.5 0.022 14.6 5.5 2.0 1 1 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Rieske_3 PF18465.1 CTQ27887.1 - 0.0094 16.2 0.5 0.54 10.5 0.6 2.8 2 1 1 3 3 3 1 Rieske 3Fe-4S FdhD-NarQ PF02634.15 CTQ27888.1 - 3.9e-69 233.0 0.1 4.5e-69 232.7 0.1 1.0 1 0 0 1 1 1 1 FdhD/NarQ family DUF1471 PF07338.13 CTQ27890.1 - 8.7e-11 41.6 4.1 1.2e-10 41.2 4.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF4148 PF13663.6 CTQ27890.1 - 0.57 10.4 8.5 1.8 8.8 4.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) PFK PF00365.20 CTQ27891.1 - 5.9e-62 209.6 0.6 7e-62 209.3 0.6 1.0 1 0 0 1 1 1 1 Phosphofructokinase DAGK_cat PF00781.24 CTQ27891.1 - 0.028 14.0 0.0 0.096 12.3 0.0 2.0 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain PTS_IIB PF02302.17 CTQ27892.1 - 1.1e-08 35.6 1.3 1.6e-08 35.1 1.3 1.3 1 1 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit Gp45_2 PF17470.2 CTQ27892.1 - 0.071 13.1 0.2 0.13 12.3 0.2 1.4 1 0 0 1 1 1 0 Phage gene product 45.2 DUF2834 PF11196.8 CTQ27892.1 - 0.2 12.0 0.0 0.25 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2834) EIIC-GAT PF03611.14 CTQ27893.1 - 9.6e-121 403.6 37.9 1.4e-120 403.1 37.9 1.2 1 0 0 1 1 1 1 PTS system sugar-specific permease component F_bP_aldolase PF01116.20 CTQ27894.1 - 2.2e-87 293.1 0.5 2.4e-87 293.0 0.5 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II MscS_porin PF12795.7 CTQ27895.1 - 0.0037 16.8 5.2 0.012 15.2 0.2 2.0 1 1 1 2 2 2 2 Mechanosensitive ion channel porin domain IFP_35_N PF07334.13 CTQ27895.1 - 0.059 13.4 0.3 0.097 12.8 0.3 1.4 1 0 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Prefoldin_2 PF01920.20 CTQ27895.1 - 0.21 11.5 3.5 0.44 10.5 1.6 1.9 2 0 0 2 2 2 0 Prefoldin subunit PTS_EIIA_2 PF00359.22 CTQ27896.1 - 6.7e-28 97.4 0.0 7.7e-28 97.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ploopntkinase3 PF18751.1 CTQ27896.1 - 0.023 14.6 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_18 PF13238.6 CTQ27897.1 - 0.00036 21.1 0.0 0.00057 20.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain Hydin_ADK PF17213.3 CTQ27897.1 - 0.0019 18.5 0.0 0.0027 18.0 0.0 1.2 1 0 0 1 1 1 1 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 CTQ27897.1 - 0.0027 17.9 0.0 0.018 15.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain CPT PF07931.12 CTQ27897.1 - 0.0084 16.0 0.0 0.014 15.2 0.0 1.4 1 1 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein SKI PF01202.22 CTQ27897.1 - 0.015 15.4 0.0 0.14 12.2 0.0 2.0 2 0 0 2 2 2 0 Shikimate kinase KTI12 PF08433.10 CTQ27897.1 - 0.038 13.4 0.0 0.061 12.8 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Zeta_toxin PF06414.12 CTQ27897.1 - 0.096 11.9 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin Cytidylate_kin PF02224.18 CTQ27897.1 - 0.11 12.3 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Cytidylate kinase AAA_22 PF13401.6 CTQ27897.1 - 0.17 12.2 0.0 0.75 10.1 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CTQ27897.1 - 0.18 12.2 0.1 0.39 11.1 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA_17 PF13207.6 CTQ27897.1 - 0.21 12.0 0.0 0.51 10.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain AzlD PF05437.12 CTQ27898.1 - 1.5e-10 41.2 10.4 1.8e-10 40.8 10.4 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) AzlC PF03591.14 CTQ27899.1 - 3.8e-27 95.4 8.6 6.2e-27 94.7 8.6 1.3 1 0 0 1 1 1 1 AzlC protein DUF3464 PF11947.8 CTQ27899.1 - 1.6 8.5 2.8 1.9 8.2 1.6 1.7 1 1 1 2 2 2 0 Photosynthesis affected mutant 68 DUF983 PF06170.12 CTQ27899.1 - 6.5 7.2 7.3 1.8 9.0 0.6 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF983) HTH_3 PF01381.22 CTQ27900.1 - 8.2e-13 48.2 0.0 1.5e-12 47.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ27900.1 - 2.8e-11 43.6 0.6 7e-11 42.3 0.6 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 CTQ27900.1 - 1.1e-07 31.5 0.0 1.7e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 Cupin domain HTH_26 PF13443.6 CTQ27900.1 - 2.5e-07 31.0 0.0 4.4e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_19 PF12844.7 CTQ27900.1 - 5.5e-06 26.3 0.0 1.1e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 CTQ27900.1 - 0.00025 20.8 0.1 0.00052 19.8 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 CTQ27900.1 - 0.00084 19.1 0.4 0.0021 17.8 0.4 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_37 PF13744.6 CTQ27900.1 - 0.0014 18.5 0.0 0.0026 17.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_1 PF00190.22 CTQ27900.1 - 0.005 16.5 0.0 0.0084 15.7 0.0 1.3 1 0 0 1 1 1 1 Cupin Cupin_6 PF12852.7 CTQ27900.1 - 0.005 16.6 0.0 0.0093 15.7 0.0 1.5 1 0 0 1 1 1 1 Cupin HTH_Tnp_1 PF01527.20 CTQ27900.1 - 0.015 15.6 0.3 0.035 14.4 0.1 1.7 2 0 0 2 2 1 0 Transposase TetR_N PF00440.23 CTQ27900.1 - 0.017 14.9 0.3 0.033 14.0 0.3 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family Sigma70_r4 PF04545.16 CTQ27900.1 - 0.029 13.9 0.1 0.067 12.7 0.1 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_38 PF13936.6 CTQ27900.1 - 0.036 13.8 0.7 0.15 11.8 0.2 2.1 1 1 1 2 2 2 0 Helix-turn-helix domain CENP-B_N PF04218.13 CTQ27900.1 - 0.056 13.1 0.2 0.22 11.2 0.0 1.9 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain AraC_binding PF02311.19 CTQ27900.1 - 0.057 13.3 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_3 PF05899.12 CTQ27900.1 - 0.066 12.9 0.0 0.13 12.0 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF861) HTH_23 PF13384.6 CTQ27900.1 - 0.074 12.9 0.3 0.23 11.3 0.1 1.9 2 0 0 2 2 2 0 Homeodomain-like domain LacI PF00356.21 CTQ27900.1 - 0.078 12.8 0.2 0.18 11.6 0.0 1.7 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family Peripla_BP_1 PF00532.21 CTQ27901.1 - 3.4e-54 184.2 0.0 4e-54 183.9 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ27901.1 - 1.9e-14 54.4 0.4 3.6e-14 53.4 0.4 1.5 1 0 0 1 1 1 1 Periplasmic binding protein-like domain LacI PF00356.21 CTQ27901.1 - 2e-12 46.7 0.1 4.1e-12 45.7 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_3 PF01381.22 CTQ27901.1 - 0.0001 22.3 0.0 0.00036 20.5 0.1 1.9 2 0 0 2 2 1 1 Helix-turn-helix Peripla_BP_4 PF13407.6 CTQ27901.1 - 0.00011 21.9 0.0 0.00021 21.0 0.0 1.5 2 0 0 2 2 2 1 Periplasmic binding protein domain HTH_Tnp_ISL3 PF13542.6 CTQ27901.1 - 0.00032 20.1 0.0 0.00091 18.6 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 CTQ27901.1 - 0.00065 19.4 0.0 0.0018 18.0 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_38 PF13936.6 CTQ27901.1 - 0.0016 18.1 2.1 0.0026 17.5 0.1 2.5 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_11 PF08279.12 CTQ27901.1 - 0.0017 18.2 0.4 0.015 15.2 0.3 2.7 3 1 0 3 3 2 1 HTH domain HTH_24 PF13412.6 CTQ27901.1 - 0.0019 17.7 0.4 0.0086 15.6 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 CTQ27901.1 - 0.0058 16.6 0.1 1 9.4 0.0 2.7 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_10 PF04967.12 CTQ27901.1 - 0.0092 15.8 0.1 0.11 12.3 0.0 2.4 2 0 0 2 2 2 1 HTH DNA binding domain Sigma70_r4_2 PF08281.12 CTQ27901.1 - 0.013 15.2 0.1 0.042 13.5 0.1 1.9 2 0 0 2 2 1 0 Sigma-70, region 4 HTH_7 PF02796.15 CTQ27901.1 - 0.02 14.9 0.0 0.065 13.3 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_28 PF13518.6 CTQ27901.1 - 0.022 14.9 0.0 0.076 13.1 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3465 PF11948.8 CTQ27901.1 - 0.033 14.1 0.1 0.066 13.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3465) HTH_36 PF13730.6 CTQ27901.1 - 0.034 14.1 0.0 0.081 12.9 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 CTQ27901.1 - 0.037 13.9 0.2 2.7 8.0 0.0 2.9 2 0 0 2 2 2 0 MarR family HTH_29 PF13551.6 CTQ27901.1 - 0.051 13.6 0.4 0.2 11.7 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn helix HTH_IclR PF09339.10 CTQ27901.1 - 0.062 13.1 0.1 0.2 11.5 0.1 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain Crp PF00325.20 CTQ27901.1 - 0.067 12.9 0.0 0.24 11.1 0.0 2.0 2 0 0 2 2 1 0 Bacterial regulatory proteins, crp family GntR PF00392.21 CTQ27901.1 - 0.075 12.7 0.1 0.43 10.3 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_8 PF02954.19 CTQ27901.1 - 0.097 12.5 0.2 0.89 9.4 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family HTH_31 PF13560.6 CTQ27901.1 - 0.13 12.6 3.8 0.18 12.2 0.1 3.1 3 1 0 3 3 3 0 Helix-turn-helix domain HTH_50 PF18024.1 CTQ27901.1 - 0.13 11.8 0.1 0.28 10.8 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain GerE PF00196.19 CTQ27901.1 - 0.18 11.4 0.1 0.36 10.4 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DUF4148 PF13663.6 CTQ27901.1 - 0.52 10.5 2.1 1.1 9.4 0.2 2.6 3 0 0 3 3 2 0 Domain of unknown function (DUF4148) Melibiase PF02065.18 CTQ27902.1 - 3.5e-118 394.5 0.0 4.5e-118 394.2 0.0 1.1 1 0 0 1 1 1 1 Melibiase Glyco_hydro_36N PF16875.5 CTQ27902.1 - 4e-43 147.8 0.0 8.9e-43 146.7 0.0 1.5 2 0 0 2 2 2 1 Glycosyl hydrolase family 36 N-terminal domain Glyco_hydro_36C PF16874.5 CTQ27902.1 - 1.5e-09 38.2 0.0 3.1e-09 37.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolase family 36 C-terminal domain Melibiase_2 PF16499.5 CTQ27902.1 - 0.033 13.3 0.0 0.068 12.3 0.0 1.4 1 0 0 1 1 1 0 Alpha galactosidase A LacY_symp PF01306.19 CTQ27903.1 - 2.8e-195 648.9 28.1 3.7e-195 648.5 28.1 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1 PF07690.16 CTQ27903.1 - 1.2e-24 86.9 47.8 1.7e-23 83.1 38.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ27903.1 - 3.3e-24 85.5 31.1 6.8e-24 84.4 29.8 2.1 1 1 1 2 2 2 1 MFS_1 like family MFS_2 PF13347.6 CTQ27903.1 - 1.3e-08 33.9 28.8 1.3e-08 33.9 28.8 2.0 1 1 1 2 2 2 1 MFS/sugar transport protein Wzz PF02706.15 CTQ27903.1 - 6 7.2 7.0 19 5.6 0.0 3.4 3 0 0 3 3 3 0 Chain length determinant protein rhaM PF05336.13 CTQ27904.1 - 7.4e-29 100.0 1.7 8.2e-29 99.8 1.7 1.0 1 0 0 1 1 1 1 L-rhamnose mutarotase DAO PF01266.24 CTQ27904.1 - 0.015 14.9 0.0 0.017 14.8 0.0 1.0 1 0 0 1 1 1 0 FAD dependent oxidoreductase Oxidored_nitro PF00148.19 CTQ27904.1 - 0.059 12.1 0.0 0.065 12.0 0.0 1.0 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase ABM PF03992.16 CTQ27904.1 - 0.12 12.5 2.7 0.17 12.0 2.7 1.3 1 1 0 1 1 1 0 Antibiotic biosynthesis monooxygenase Fe-ADH PF00465.19 CTQ27905.1 - 1.3e-121 405.9 3.1 1.4e-121 405.8 3.1 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ27905.1 - 4.7e-15 56.0 1.1 8.5e-08 32.2 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase BPD_transp_2 PF02653.16 CTQ27906.1 - 1.8e-47 161.7 39.6 1.8e-47 161.7 39.6 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 CTQ27907.1 - 1.8e-42 145.3 39.5 2.8e-42 144.7 39.5 1.3 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 CTQ27908.1 - 1.3e-55 187.6 0.0 3.8e-31 108.4 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ27908.1 - 1.8e-06 28.0 1.6 0.0086 15.9 0.0 3.3 3 1 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ27908.1 - 2.1e-05 24.5 0.0 0.0075 16.2 0.0 3.0 4 0 0 4 4 4 1 RsgA GTPase AAA_29 PF13555.6 CTQ27908.1 - 4.4e-05 23.1 0.0 0.0012 18.5 0.0 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ27908.1 - 0.00012 22.7 0.1 0.00041 20.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CTQ27908.1 - 0.00045 20.5 2.6 0.0047 17.2 0.5 3.0 2 2 0 2 2 2 1 AAA domain SMC_N PF02463.19 CTQ27908.1 - 0.00061 19.3 0.4 0.2 11.0 0.0 3.0 3 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 CTQ27908.1 - 0.00079 19.2 0.0 0.0011 18.7 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain TsaE PF02367.17 CTQ27908.1 - 0.0044 17.0 0.0 1.6 8.7 0.0 2.5 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 CTQ27908.1 - 0.0059 16.3 1.7 0.1 12.3 0.4 3.2 3 1 0 3 3 3 1 AAA domain ABC_ATPase PF09818.9 CTQ27908.1 - 0.022 13.6 3.5 1.3 7.7 0.2 3.0 3 0 0 3 3 3 0 Predicted ATPase of the ABC class MMR_HSR1 PF01926.23 CTQ27908.1 - 0.029 14.5 0.1 0.82 9.8 0.1 2.5 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_16 PF13191.6 CTQ27908.1 - 0.039 14.3 0.2 0.68 10.3 0.1 2.6 2 1 0 2 2 2 0 AAA ATPase domain AAA_33 PF13671.6 CTQ27908.1 - 0.12 12.5 0.4 1.3 9.2 0.4 2.5 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ27908.1 - 0.14 11.7 1.4 1.2 8.6 0.1 2.7 3 0 0 3 3 3 0 AAA domain DUF815 PF05673.13 CTQ27908.1 - 0.16 11.1 0.0 0.66 9.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF815) DLIC PF05783.11 CTQ27908.1 - 0.19 10.5 0.0 0.65 8.8 0.0 1.7 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) Peripla_BP_4 PF13407.6 CTQ27909.1 - 4.9e-60 203.3 10.3 5.8e-60 203.0 10.3 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ27909.1 - 6.5e-07 29.0 0.3 1.4e-06 28.0 0.3 1.5 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family AGT PF11440.8 CTQ27909.1 - 0.083 11.9 0.1 0.21 10.6 0.0 1.6 2 0 0 2 2 2 0 DNA alpha-glucosyltransferase Aldolase_II PF00596.21 CTQ27910.1 - 1.2e-35 123.1 0.0 1.5e-35 122.8 0.0 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain RhaA PF06134.11 CTQ27911.1 - 9.3e-235 779.4 0.0 1.1e-234 779.2 0.0 1.0 1 0 0 1 1 1 1 L-rhamnose isomerase (RhaA) FeS_assembly_P PF01883.19 CTQ27911.1 - 0.18 12.0 0.3 16 5.7 0.0 3.1 3 0 0 3 3 3 0 Iron-sulfur cluster assembly protein FGGY_N PF00370.21 CTQ27912.1 - 1.1e-29 103.8 0.0 1.4e-29 103.4 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 CTQ27912.1 - 1.2e-26 93.7 0.4 3.4e-26 92.2 0.1 1.8 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain HTH_18 PF12833.7 CTQ27913.1 - 1.9e-26 92.1 0.7 4.6e-26 90.9 0.7 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 CTQ27913.1 - 7.9e-23 80.9 1.2 7.9e-23 80.9 1.2 1.8 2 0 0 2 2 2 1 AraC-like ligand binding domain HTH_AraC PF00165.23 CTQ27913.1 - 5.4e-22 77.4 0.1 1.2e-10 41.2 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ27913.1 - 2.7e-05 23.8 1.5 5e-05 22.9 1.5 1.4 1 0 0 1 1 1 1 Cupin domain AAA_34 PF13872.6 CTQ27913.1 - 0.014 14.3 0.1 0.018 14.0 0.1 1.1 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 HTH_18 PF12833.7 CTQ27914.1 - 3.9e-22 78.3 0.1 9.7e-22 77.0 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 CTQ27914.1 - 3.5e-20 72.3 1.6 4.9e-20 71.8 0.2 1.8 1 1 1 2 2 2 1 AraC-like ligand binding domain HTH_AraC PF00165.23 CTQ27914.1 - 1.3e-18 66.6 0.1 1.8e-11 43.8 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ27914.1 - 4.4e-06 26.3 0.0 8.9e-06 25.3 0.0 1.4 1 0 0 1 1 1 1 Cupin domain ARD PF03079.14 CTQ27914.1 - 0.038 14.2 0.0 0.067 13.4 0.0 1.4 1 0 0 1 1 1 0 ARD/ARD' family RhaT PF06379.12 CTQ27915.1 - 1e-214 712.2 33.1 1.1e-214 712.0 33.1 1.0 1 0 0 1 1 1 1 L-rhamnose-proton symport protein (RhaT) Sod_Fe_C PF02777.18 CTQ27917.1 - 1.4e-40 137.5 0.2 3.5e-40 136.3 0.0 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 CTQ27917.1 - 8.2e-34 115.9 2.5 1.3e-33 115.3 2.5 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Spore_YpjB PF09577.10 CTQ27917.1 - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) MOSC PF03473.17 CTQ27918.1 - 3.7e-21 75.5 0.0 5.3e-21 75.0 0.0 1.2 1 0 0 1 1 1 1 MOSC domain 3-alpha PF03475.14 CTQ27918.1 - 1.7e-12 47.0 0.1 2.7e-12 46.3 0.1 1.3 1 0 0 1 1 1 1 3-alpha domain 7TM_GPCR_Srt PF10321.9 CTQ27918.1 - 0.024 13.6 0.0 0.032 13.2 0.0 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt HATPase_c PF02518.26 CTQ27919.1 - 3.1e-22 79.2 0.0 4e-21 75.6 0.0 2.5 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ27919.1 - 1e-13 51.1 5.0 1.3e-13 50.7 3.7 2.0 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain CpxA_peri PF16527.5 CTQ27919.1 - 6.7e-11 42.7 0.0 1.6e-10 41.5 0.0 1.6 1 0 0 1 1 1 1 Two-component sensor protein CpxA, periplasmic domain HAMP PF00672.25 CTQ27919.1 - 1.5e-10 41.3 0.0 4.8e-10 39.7 0.0 1.9 1 0 0 1 1 1 1 HAMP domain HATPase_c_3 PF13589.6 CTQ27919.1 - 1e-05 25.4 0.0 2e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 CTQ27919.1 - 7.7e-05 22.7 0.0 0.00014 21.8 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Response_reg PF00072.24 CTQ27920.1 - 2.1e-29 101.9 0.4 3.6e-29 101.2 0.4 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ27920.1 - 1.2e-21 76.5 0.4 2.7e-21 75.4 0.1 1.8 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal FleQ PF06490.11 CTQ27920.1 - 0.016 15.6 0.1 0.024 15.0 0.1 1.3 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ LTXXQ PF07813.12 CTQ27921.1 - 7.6e-22 78.0 12.9 7.6e-22 78.0 12.9 1.9 1 1 1 2 2 2 1 LTXXQ motif family protein Metal_resist PF13801.6 CTQ27921.1 - 1.2e-08 35.2 16.5 6.9e-07 29.5 7.2 2.3 1 1 1 2 2 2 2 Heavy-metal resistance Sua5_yciO_yrdC PF01300.18 CTQ27921.1 - 0.063 12.8 0.8 0.12 11.9 0.8 1.6 1 1 0 1 1 1 0 Telomere recombination Cation_efflux PF01545.21 CTQ27922.1 - 3.7e-46 157.4 14.3 4.4e-46 157.1 14.3 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 CTQ27922.1 - 1.4e-25 89.2 0.1 2.1e-25 88.7 0.1 1.2 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF1129 PF06570.11 CTQ27922.1 - 0.032 13.7 1.3 0.042 13.3 0.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF4271 PF14093.6 CTQ27922.1 - 0.23 11.3 3.0 0.14 12.0 0.8 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4271) PFK PF00365.20 CTQ27923.1 - 4.1e-107 357.7 0.8 4.9e-107 357.5 0.8 1.1 1 0 0 1 1 1 1 Phosphofructokinase NAD_kinase PF01513.21 CTQ27923.1 - 0.0019 17.5 0.1 0.0036 16.5 0.0 1.4 2 0 0 2 2 2 1 ATP-NAD kinase RraA-like PF03737.15 CTQ27924.1 - 1.2e-34 119.7 0.1 1.3e-34 119.5 0.1 1.0 1 0 0 1 1 1 1 Aldolase/RraA UbiA PF01040.18 CTQ27925.1 - 2.3e-40 138.5 16.6 3.3e-40 138.0 16.6 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF5362 PF17319.2 CTQ27925.1 - 0.0051 16.6 0.4 0.0051 16.6 0.4 2.5 2 0 0 2 2 2 1 Family of unknown function (DUF5362) AAA_2 PF07724.14 CTQ27926.1 - 8.1e-51 172.5 0.4 9.9e-42 142.9 0.1 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA PF00004.29 CTQ27926.1 - 2.3e-16 60.4 0.0 2.7e-07 31.1 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 CTQ27926.1 - 1.6e-07 31.4 0.1 1.3e-05 25.2 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 CTQ27926.1 - 3.9e-07 30.4 0.0 0.00014 22.2 0.0 2.5 2 0 0 2 2 2 1 AAA domain ClpB_D2-small PF10431.9 CTQ27926.1 - 1.1e-06 28.6 0.7 4.8e-06 26.5 0.1 2.3 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein MCM PF00493.23 CTQ27926.1 - 4.3e-05 22.7 0.3 0.0018 17.4 0.0 2.2 2 0 0 2 2 2 1 MCM P-loop domain AAA_16 PF13191.6 CTQ27926.1 - 0.00023 21.6 0.7 0.00098 19.5 0.2 2.3 2 1 0 2 2 2 1 AAA ATPase domain Mg_chelatase PF01078.21 CTQ27926.1 - 0.00026 20.4 0.1 0.0036 16.7 0.0 2.7 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 CTQ27926.1 - 0.001 18.8 0.1 0.02 14.6 0.0 2.7 2 1 1 3 3 3 1 Sigma-54 interaction domain RuvB_N PF05496.12 CTQ27926.1 - 0.0018 18.1 0.8 0.087 12.6 0.0 2.9 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 CTQ27926.1 - 0.0018 18.8 0.1 0.006 17.1 0.0 2.0 2 0 0 2 2 1 1 AAA domain TniB PF05621.11 CTQ27926.1 - 0.0084 15.5 0.2 0.025 14.0 0.0 1.9 2 0 0 2 2 2 1 Bacterial TniB protein IstB_IS21 PF01695.17 CTQ27926.1 - 0.0087 15.8 0.0 0.024 14.4 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.6 CTQ27926.1 - 0.0093 16.2 0.6 0.043 14.1 0.0 2.5 3 1 0 3 3 2 1 AAA domain TIP49 PF06068.13 CTQ27926.1 - 0.014 14.7 0.6 0.08 12.1 0.0 2.1 2 0 0 2 2 2 0 TIP49 P-loop domain AAA_33 PF13671.6 CTQ27926.1 - 0.015 15.5 0.0 0.032 14.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 CTQ27926.1 - 0.015 15.3 0.0 4 7.5 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 CTQ27926.1 - 0.037 13.8 0.2 0.14 11.9 0.1 2.1 2 1 0 2 2 2 0 AAA domain TsaE PF02367.17 CTQ27926.1 - 0.039 14.0 0.0 0.14 12.1 0.0 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 CTQ27926.1 - 0.045 13.3 0.0 0.13 11.8 0.0 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 CTQ27926.1 - 0.048 13.5 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 CTQ27926.1 - 0.063 13.8 0.0 0.25 11.8 0.0 2.0 2 1 0 2 2 2 0 ABC transporter SRP54 PF00448.22 CTQ27926.1 - 0.073 12.7 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain DEAD PF00270.29 CTQ27926.1 - 0.083 12.7 0.0 1.3 8.8 0.0 2.3 2 0 0 2 2 2 0 DEAD/DEAH box helicase Zeta_toxin PF06414.12 CTQ27926.1 - 0.084 12.1 0.0 0.18 11.1 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin ATP-synt_ab PF00006.25 CTQ27926.1 - 0.11 12.2 0.1 0.45 10.1 0.0 1.9 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain RNA_helicase PF00910.22 CTQ27926.1 - 0.12 12.7 0.0 1.1 9.7 0.0 2.2 2 0 0 2 2 2 0 RNA helicase ResIII PF04851.15 CTQ27926.1 - 0.74 9.8 3.6 1.7 8.6 0.0 2.9 3 1 1 4 4 4 0 Type III restriction enzyme, res subunit Proteasome PF00227.26 CTQ27927.1 - 3.3e-23 82.2 0.3 5.7e-23 81.4 0.3 1.4 1 1 0 1 1 1 1 Proteasome subunit ALF PF03752.13 CTQ27927.1 - 0.035 14.1 1.8 0.064 13.2 0.8 2.1 1 1 1 2 2 2 0 Short repeats of unknown function PspC PF04024.12 CTQ27927.1 - 0.12 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 PspC domain SPOR PF05036.13 CTQ27928.1 - 3.9e-16 59.2 1.9 7.9e-16 58.2 0.0 2.5 3 0 0 3 3 3 1 Sporulation related domain TFIIA PF03153.13 CTQ27928.1 - 0.032 14.2 33.6 0.037 14.0 33.6 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Tsc35 PF15079.6 CTQ27928.1 - 4.3 6.8 9.0 6.7 6.2 9.0 1.3 1 0 0 1 1 1 0 Testis-specific protein 35 PAT1 PF09770.9 CTQ27928.1 - 6.1 5.0 30.4 7 4.8 30.4 1.1 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Peripla_BP_3 PF13377.6 CTQ27929.1 - 2.7e-42 144.9 0.0 6.1e-42 143.8 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ27929.1 - 1.1e-34 120.2 0.0 1.6e-34 119.7 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 CTQ27929.1 - 1.9e-19 69.1 0.5 3.9e-19 68.2 0.5 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ27929.1 - 2.1e-13 50.4 0.0 9.9e-13 48.3 0.0 1.9 1 1 0 1 1 1 1 Periplasmic binding protein domain HTH_Tnp_ISL3 PF13542.6 CTQ27929.1 - 0.067 12.6 0.2 0.14 11.6 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 PriA_3primeBD PF17764.1 CTQ27931.1 - 2.2e-32 110.8 0.0 5.1e-32 109.6 0.0 1.7 1 0 0 1 1 1 1 3′ DNA-binding domain (3′BD) PriA_C PF18074.1 CTQ27931.1 - 3.4e-19 69.5 0.1 3.9e-18 66.1 0.0 2.8 3 1 0 3 3 3 1 Primosomal protein N C-terminal domain DEAD PF00270.29 CTQ27931.1 - 2.5e-15 56.7 0.0 4.2e-15 56.0 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 CTQ27931.1 - 8.2e-13 48.7 0.0 1.5e-12 47.9 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 CTQ27931.1 - 8.1e-10 39.0 0.0 7e-05 23.1 0.0 2.6 2 0 0 2 2 2 2 Helicase conserved C-terminal domain PriA_CRR PF18319.1 CTQ27931.1 - 2.2e-08 34.0 15.3 2.2e-08 34.0 15.3 2.9 3 0 0 3 3 3 1 PriA DNA helicase Cys-rich region (CRR) domain AAA_30 PF13604.6 CTQ27931.1 - 0.0025 17.6 1.6 0.016 15.0 0.0 2.5 3 0 0 3 3 3 1 AAA domain zinc-ribbons_6 PF07191.12 CTQ27931.1 - 0.0079 16.2 4.5 0.016 15.1 4.5 1.5 1 0 0 1 1 1 1 zinc-ribbons TrwB_AAD_bind PF10412.9 CTQ27931.1 - 0.048 12.6 0.0 0.089 11.7 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_19 PF13245.6 CTQ27931.1 - 0.094 13.0 0.0 0.31 11.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain zinc_ribbon_5 PF13719.6 CTQ27931.1 - 0.097 12.4 2.9 0.87 9.4 0.3 2.5 2 0 0 2 2 2 0 zinc-ribbon domain LAL_C2 PF18603.1 CTQ27931.1 - 0.12 12.6 0.0 19 5.5 0.0 2.6 2 0 0 2 2 2 0 L-amino acid ligase C-terminal domain 2 AAA_22 PF13401.6 CTQ27931.1 - 0.14 12.4 0.0 0.75 10.1 0.0 2.3 1 1 1 2 2 2 0 AAA domain zf-H2C2_5 PF13909.6 CTQ27931.1 - 0.35 10.6 0.1 0.35 10.6 0.1 3.0 3 0 0 3 3 3 0 C2H2-type zinc-finger domain Zn_Tnp_IS1595 PF12760.7 CTQ27931.1 - 0.95 9.5 11.5 13 5.9 6.3 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Ribosomal_L31 PF01197.18 CTQ27933.1 - 1.3e-29 102.2 0.2 1.5e-29 102.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L31 Zn_ribbon_SprT PF17283.2 CTQ27933.1 - 0.055 13.4 0.8 0.17 11.8 0.8 1.8 1 1 0 1 1 1 0 SprT-like zinc ribbon domain MetJ PF01340.20 CTQ27934.1 - 1.5e-58 194.8 0.0 1.7e-58 194.6 0.0 1.0 1 0 0 1 1 1 1 Met Apo-repressor, MetJ SWI2_SNF2 PF18766.1 CTQ27934.1 - 0.033 13.9 0.0 0.036 13.7 0.0 1.1 1 0 0 1 1 1 0 SWI2/SNF2 ATPase AphA_like PF14557.6 CTQ27934.1 - 0.094 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Putative AphA-like transcriptional regulator Cys_Met_Meta_PP PF01053.20 CTQ27935.1 - 1.7e-142 474.5 0.0 2e-142 474.3 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 CTQ27935.1 - 4e-08 32.8 0.0 5.6e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 CTQ27935.1 - 0.00036 19.6 0.0 0.00052 19.1 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V AA_kinase PF00696.28 CTQ27936.1 - 2e-44 152.0 0.1 3.2e-44 151.3 0.1 1.3 1 0 0 1 1 1 1 Amino acid kinase family Homoserine_dh PF00742.19 CTQ27936.1 - 2.1e-43 148.2 0.0 3.6e-43 147.5 0.0 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 CTQ27936.1 - 2.8e-25 89.3 0.0 9.8e-25 87.5 0.0 2.0 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Zn_Tnp_IS1 PF03811.13 CTQ27937.1 - 1.7e-06 27.6 5.1 4e-06 26.4 5.1 1.6 1 0 0 1 1 1 1 InsA N-terminal domain Lar_restr_allev PF14354.6 CTQ27937.1 - 0.047 14.1 0.4 1.4 9.4 0.4 2.4 2 0 0 2 2 2 0 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.7 CTQ27937.1 - 0.34 10.9 6.9 0.2 11.7 3.4 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_4 PF13717.6 CTQ27937.1 - 8 6.5 6.5 1.4 8.9 2.4 1.9 2 0 0 2 2 2 0 zinc-ribbon domain 5_nucleotid_C PF02872.18 CTQ27938.1 - 1.7e-38 132.3 0.1 5.1e-38 130.8 0.0 1.8 2 0 0 2 2 2 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 CTQ27938.1 - 4.1e-12 47.0 2.2 1.7e-11 45.1 1.6 1.9 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase CMD PF02627.20 CTQ27939.1 - 7.3e-23 80.4 0.1 9.1e-23 80.1 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family HTH_1 PF00126.27 CTQ27940.1 - 1e-21 76.6 0.5 2.4e-21 75.4 0.5 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 CTQ27940.1 - 5e-18 65.2 6.2 9.2e-18 64.4 6.2 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 CTQ27940.1 - 0.0067 16.2 0.2 0.016 15.0 0.2 1.7 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain Mga PF05043.13 CTQ27940.1 - 0.0079 16.8 0.1 0.014 15.9 0.1 1.3 1 0 0 1 1 1 1 Mga helix-turn-helix domain HTH_24 PF13412.6 CTQ27940.1 - 0.034 13.7 0.0 0.097 12.3 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PBP_like PF12727.7 CTQ27940.1 - 0.048 12.8 0.0 0.079 12.1 0.0 1.5 1 1 0 1 1 1 0 PBP superfamily domain MarR_2 PF12802.7 CTQ27940.1 - 0.34 10.8 2.6 3.2 7.7 0.1 3.1 3 1 0 3 3 3 0 MarR family MTHFR PF02219.17 CTQ27941.1 - 1.9e-108 362.2 0.0 2.1e-108 362.0 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase EamA PF00892.20 CTQ27943.1 - 4e-47 159.8 41.2 1.1e-25 90.4 15.3 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 CTQ27943.1 - 6.3e-05 22.5 13.0 0.00024 20.6 2.9 2.0 1 1 1 2 2 2 2 Triose-phosphate Transporter family DUF1465 PF07323.12 CTQ27943.1 - 0.51 10.2 1.3 0.79 9.6 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Fe-ADH PF00465.19 CTQ27944.1 - 2.6e-65 220.6 6.4 3e-65 220.4 6.4 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ27944.1 - 2.7e-32 112.4 0.3 3.5e-32 112.1 0.3 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 CTQ27944.1 - 0.0054 15.9 3.0 0.13 11.4 3.0 2.7 1 1 0 1 1 1 1 3-dehydroquinate synthase TAL_FSA PF00923.19 CTQ27945.1 - 3.9e-46 157.7 0.0 1.6e-45 155.6 0.0 1.8 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase Nab2 PF11517.8 CTQ27945.1 - 0.14 12.5 0.0 0.25 11.7 0.0 1.4 1 0 0 1 1 1 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) HTH_18 PF12833.7 CTQ27946.1 - 2.6e-22 78.9 0.1 4.8e-22 78.0 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ27946.1 - 1.1e-18 66.8 0.1 2.3e-13 49.9 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_4 PF08007.12 CTQ27946.1 - 0.013 15.0 0.1 0.026 14.0 0.1 1.5 1 0 0 1 1 1 0 Cupin superfamily protein DUF4129 PF13559.6 CTQ27946.1 - 0.1 12.9 0.4 0.28 11.5 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4129) ZinT PF09223.11 CTQ27947.1 - 1e-84 282.9 2.7 1.2e-84 282.7 2.7 1.0 1 0 0 1 1 1 1 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment PEPcase PF00311.17 CTQ27948.1 - 8.2e-294 976.7 0.0 1.1e-293 976.3 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase PEPcase_2 PF14010.6 CTQ27948.1 - 9.8e-06 24.3 0.0 1.9e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Peptidase_M20 PF01546.28 CTQ27949.1 - 1.6e-32 112.9 0.0 2.1e-32 112.5 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ27949.1 - 4.8e-24 84.4 0.0 7.5e-24 83.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 CTQ27949.1 - 0.0011 18.7 0.0 0.0018 18.0 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M28 TetR_C_33 PF13305.6 CTQ27949.1 - 0.023 15.5 0.0 0.096 13.4 0.0 2.0 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Peptidase_M42 PF05343.14 CTQ27949.1 - 0.056 12.5 0.0 0.092 11.8 0.0 1.3 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase Semialdhyde_dh PF01118.24 CTQ27950.1 - 2.2e-33 115.3 0.0 4.2e-33 114.3 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 CTQ27950.1 - 9e-17 61.7 0.0 1.4e-16 61.2 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain DapB_N PF01113.20 CTQ27950.1 - 0.00073 19.6 0.0 0.0015 18.7 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus DUF4459 PF14673.6 CTQ27950.1 - 0.011 15.6 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4459) GFO_IDH_MocA PF01408.22 CTQ27950.1 - 0.015 16.1 0.0 0.043 14.7 0.0 1.8 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Epimerase PF01370.21 CTQ27950.1 - 0.016 14.7 0.0 0.025 14.1 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family NmrA PF05368.13 CTQ27950.1 - 0.1 12.2 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family AA_kinase PF00696.28 CTQ27951.1 - 2.7e-40 138.5 2.7 3e-40 138.3 2.7 1.0 1 0 0 1 1 1 1 Amino acid kinase family Smr PF01713.21 CTQ27951.1 - 0.02 15.3 0.1 0.26 11.7 0.0 2.5 2 1 1 3 3 3 0 Smr domain Lyase_1 PF00206.20 CTQ27952.1 - 3e-100 335.6 0.0 6.8e-100 334.5 0.0 1.6 2 0 0 2 2 2 1 Lyase ASL_C2 PF14698.6 CTQ27952.1 - 1.5e-25 89.8 0.2 4.6e-25 88.2 0.0 2.0 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal FUSC PF04632.12 CTQ27952.1 - 0.025 13.1 3.1 0.045 12.3 3.1 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family ADSL_C PF10397.9 CTQ27952.1 - 0.093 13.3 0.6 0.62 10.7 0.0 2.6 2 0 0 2 2 2 0 Adenylosuccinate lyase C-terminus K-box PF01486.17 CTQ27952.1 - 0.38 10.9 3.5 1.7 8.8 0.5 2.8 3 1 1 4 4 4 0 K-box region LysR_substrate PF03466.20 CTQ27953.1 - 8.2e-55 185.4 0.3 1.2e-54 184.9 0.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27953.1 - 4.1e-21 74.7 0.6 9.1e-21 73.6 0.2 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ27953.1 - 0.0076 16.0 0.1 0.02 14.7 0.1 1.7 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain Pyr_redox_2 PF07992.14 CTQ27954.1 - 7.5e-58 196.1 0.0 9.4e-58 195.7 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 CTQ27954.1 - 4.7e-30 104.1 0.8 4.7e-30 104.1 0.8 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 CTQ27954.1 - 6.8e-18 65.0 3.0 5.3e-16 58.9 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ27954.1 - 6.6e-08 32.2 0.2 0.0012 18.2 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 CTQ27954.1 - 2.4e-06 27.2 0.0 3.9e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CTQ27954.1 - 6.3e-06 26.3 1.1 0.00014 22.0 0.2 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 CTQ27954.1 - 1.5e-05 24.3 2.9 0.00019 20.6 2.2 2.3 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 CTQ27954.1 - 0.00013 21.3 0.9 0.00034 19.9 0.5 1.9 2 0 0 2 2 2 1 Thi4 family HI0933_like PF03486.14 CTQ27954.1 - 0.00048 18.9 2.5 0.039 12.6 1.4 3.1 4 1 0 4 4 4 1 HI0933-like protein GIDA PF01134.22 CTQ27954.1 - 0.0011 18.1 3.7 0.45 9.5 2.3 3.4 3 1 0 3 3 3 2 Glucose inhibited division protein A K_oxygenase PF13434.6 CTQ27954.1 - 0.0011 18.1 0.0 0.0022 17.2 0.0 1.4 1 0 0 1 1 1 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 CTQ27954.1 - 0.0011 18.3 0.0 0.023 14.0 0.0 2.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 CTQ27954.1 - 0.0016 17.8 2.4 0.0023 17.2 0.5 2.2 3 0 0 3 3 3 1 FAD binding domain 3HCDH_N PF02737.18 CTQ27954.1 - 0.0084 16.0 1.1 1.5 8.7 0.0 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 CTQ27954.1 - 0.017 15.1 0.3 4.9 7.1 0.4 2.7 2 1 0 2 2 2 0 FAD-NAD(P)-binding 2-Hacid_dh_C PF02826.19 CTQ27954.1 - 0.017 14.5 0.6 0.048 13.0 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TetR_N PF00440.23 CTQ27955.1 - 3.2e-08 33.2 1.9 3.4e-08 33.2 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 CTQ27955.1 - 0.0018 19.0 2.6 0.0018 19.0 2.6 1.7 2 1 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1 PF01527.20 CTQ27955.1 - 0.0048 17.2 0.0 1.2 9.5 0.0 3.2 3 0 0 3 3 3 1 Transposase DUF1422 PF07226.11 CTQ27956.1 - 6e-51 171.2 1.1 6.7e-51 171.1 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1422) Bax1-I PF01027.20 CTQ27956.1 - 0.0021 17.9 3.9 0.0025 17.7 3.9 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF1772 PF08592.11 CTQ27956.1 - 5.8 7.2 7.0 5.9 7.2 4.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1772) tRNA_U5-meth_tr PF05958.11 CTQ27957.1 - 2.1e-190 632.2 0.2 2.4e-190 632.1 0.2 1.0 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_25 PF13649.6 CTQ27957.1 - 2.6e-06 28.0 0.0 1.8e-05 25.3 0.0 2.3 2 1 0 3 3 3 1 Methyltransferase domain Methyltransf_4 PF02390.17 CTQ27957.1 - 6.2e-05 22.5 0.1 0.00011 21.7 0.1 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_15 PF09445.10 CTQ27957.1 - 0.00022 20.8 0.0 0.00038 20.1 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 CTQ27957.1 - 0.00022 20.9 0.2 0.00078 19.1 0.2 1.8 1 1 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 CTQ27957.1 - 0.00047 19.8 0.1 0.0009 18.8 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 CTQ27957.1 - 0.00087 19.9 0.0 0.0025 18.4 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 CTQ27957.1 - 0.0026 17.2 0.1 0.0042 16.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 CTQ27957.1 - 0.015 15.1 0.1 0.031 14.1 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain Met_10 PF02475.16 CTQ27957.1 - 0.018 14.8 0.0 0.027 14.2 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein DUF3164 PF11363.8 CTQ27957.1 - 0.029 14.0 0.0 0.059 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3164) Methyltransf_12 PF08242.12 CTQ27957.1 - 0.083 13.6 0.0 0.21 12.4 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain TonB_dep_Rec PF00593.24 CTQ27958.1 - 1.4e-39 137.3 56.8 3.4e-39 136.0 56.9 1.6 1 1 0 1 1 1 1 TonB dependent receptor Plug PF07715.15 CTQ27958.1 - 9.1e-28 97.0 0.8 9.1e-28 97.0 0.8 2.0 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain Pro_Al_protease PF02983.14 CTQ27958.1 - 0.068 13.2 0.1 0.24 11.5 0.1 1.9 1 0 0 1 1 1 0 Alpha-lytic protease prodomain Asp_Glu_race PF01177.22 CTQ27959.1 - 8.5e-26 91.2 0.0 1e-25 90.9 0.0 1.1 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Lyase_1 PF00206.20 CTQ27960.1 - 5.2e-121 403.8 0.2 7.4e-121 403.3 0.2 1.2 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 CTQ27960.1 - 3.8e-25 88.0 0.4 1.5e-24 86.2 0.1 2.1 2 0 0 2 2 2 1 Fumarase C C-terminus Ter PF05472.11 CTQ27961.1 - 1.2e-134 448.0 0.6 1.4e-134 447.8 0.6 1.0 1 0 0 1 1 1 1 DNA replication terminus site-binding protein (Ter protein) HATPase_c PF02518.26 CTQ27962.1 - 1.6e-21 76.9 0.0 3e-21 76.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ27962.1 - 4.9e-07 29.7 1.1 4.9e-07 29.7 1.1 2.4 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 CTQ27962.1 - 4.1e-06 27.1 0.1 1.5e-05 25.2 0.0 2.1 2 0 0 2 2 2 1 HAMP domain HATPase_c_3 PF13589.6 CTQ27962.1 - 6.5e-05 22.8 0.0 0.0001 22.1 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 CTQ27962.1 - 0.002 18.1 0.0 0.0036 17.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain R3H PF01424.22 CTQ27962.1 - 0.027 14.5 0.1 0.25 11.3 0.0 2.5 2 0 0 2 2 2 0 R3H domain HATPase_c_5 PF14501.6 CTQ27962.1 - 0.12 12.3 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 GHKL domain Holin_BlyA PF05102.12 CTQ27962.1 - 3.2 7.8 5.2 2.5 8.1 0.0 2.3 2 0 0 2 2 2 0 holin, BlyA family Trans_reg_C PF00486.28 CTQ27964.1 - 3.3e-21 75.1 0.2 7.1e-21 74.1 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 CTQ27964.1 - 1.8e-20 73.2 0.0 2.6e-20 72.6 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain GlpM PF06942.12 CTQ27965.1 - 1.1e-50 170.5 8.0 1.3e-50 170.3 8.0 1.0 1 0 0 1 1 1 1 GlpM protein adh_short_C2 PF13561.6 CTQ27966.1 - 1.8e-25 89.9 0.0 2.2e-25 89.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ27966.1 - 1.4e-22 80.1 0.0 1.7e-22 79.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 CTQ27966.1 - 0.00063 19.3 0.1 2.4 7.6 0.0 3.0 2 1 1 3 3 3 3 NAD dependent epimerase/dehydratase family KR PF08659.10 CTQ27966.1 - 0.00079 19.4 0.3 0.0029 17.5 0.3 1.8 1 1 0 1 1 1 1 KR domain AA_permease_2 PF13520.6 CTQ27967.1 - 8.8e-74 248.8 33.9 1e-73 248.6 33.9 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 CTQ27967.1 - 1.3e-13 50.4 35.6 4.6e-13 48.6 35.5 1.9 1 1 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 CTQ27967.1 - 5.1e-08 32.1 8.1 9.7e-08 31.2 8.1 1.4 1 0 0 1 1 1 1 Spore germination protein FixS PF03597.15 CTQ27967.1 - 1.2 8.9 0.0 1.2 8.9 0.0 4.2 4 0 0 4 4 4 0 Cytochrome oxidase maturation protein cbb3-type DUF1471 PF07338.13 CTQ27968.1 - 2.2e-58 194.0 10.4 1.3e-19 69.9 0.2 3.5 3 0 0 3 3 3 3 Protein of unknown function (DUF1471) AlaDh_PNT_C PF01262.21 CTQ27970.1 - 8.8e-76 253.9 2.1 1.3e-75 253.4 2.1 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain AlaDh_PNT_N PF05222.15 CTQ27970.1 - 4.2e-51 172.8 0.1 8.8e-51 171.8 0.1 1.6 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, N-terminal domain PNTB_4TM PF12769.7 CTQ27970.1 - 1.7e-36 124.5 7.8 5.7e-36 122.8 7.8 1.9 1 0 0 1 1 1 1 4TM region of pyridine nucleotide transhydrogenase, mitoch 2-Hacid_dh_C PF02826.19 CTQ27970.1 - 0.00019 20.8 0.4 0.042 13.2 0.1 2.8 2 1 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 CTQ27970.1 - 0.011 14.9 0.7 0.022 14.0 0.7 1.5 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF3392 PF11872.8 CTQ27970.1 - 0.025 14.8 2.9 0.069 13.4 2.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3392) Pyr_redox PF00070.27 CTQ27970.1 - 0.064 13.8 0.3 0.31 11.6 0.3 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase PNTB PF02233.16 CTQ27971.1 - 6.6e-205 681.4 19.3 7.4e-205 681.2 19.3 1.0 1 0 0 1 1 1 1 NAD(P) transhydrogenase beta subunit TPP_enzyme_M PF00205.22 CTQ27971.1 - 0.014 15.1 1.0 0.084 12.6 0.1 2.7 2 1 1 3 3 3 0 Thiamine pyrophosphate enzyme, central domain AA_kinase PF00696.28 CTQ27971.1 - 0.024 14.2 0.0 0.055 13.1 0.0 1.6 2 0 0 2 2 2 0 Amino acid kinase family O-antigen_lig PF13425.6 CTQ27971.1 - 4 6.1 9.1 0.31 9.8 2.8 2.0 2 0 0 2 2 2 0 O-antigen ligase like membrane protein OPT PF03169.15 CTQ27971.1 - 6.4 5.3 22.9 0.31 9.6 7.6 2.5 2 1 0 2 2 2 0 OPT oligopeptide transporter protein Phage_holin_2_4 PF16082.5 CTQ27971.1 - 9.5 6.0 11.6 0.11 12.2 0.6 3.1 3 1 0 3 3 3 0 Bacteriophage holin family, superfamily II-like YdiH PF15930.5 CTQ27972.1 - 5.9e-43 144.8 1.6 6.8e-43 144.7 1.6 1.0 1 0 0 1 1 1 1 Domain of unknown function Usp PF00582.26 CTQ27973.1 - 8.2e-36 123.6 0.0 3.3e-19 69.8 0.0 2.1 2 0 0 2 2 2 2 Universal stress protein family cNMP_binding PF00027.29 CTQ27974.1 - 2e-16 59.8 0.0 4.3e-16 58.8 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Crp PF00325.20 CTQ27974.1 - 6.1e-16 57.8 0.5 1e-15 57.0 0.5 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family HTH_Crp_2 PF13545.6 CTQ27974.1 - 9.3e-16 57.6 0.1 1.6e-15 56.8 0.1 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 CTQ27974.1 - 0.0089 15.9 0.0 0.027 14.4 0.0 1.8 2 0 0 2 2 2 1 MarR family DNA_binding_1 PF01035.20 CTQ27975.1 - 4.5e-35 119.6 0.4 6.1e-35 119.2 0.4 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 CTQ27975.1 - 2e-12 47.7 0.0 2.7e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABG_transport PF03806.13 CTQ27977.1 - 2.3e-198 659.5 31.5 2.6e-198 659.4 31.5 1.0 1 0 0 1 1 1 1 AbgT putative transporter family M20_dimer PF07687.14 CTQ27978.1 - 1.1e-05 25.3 0.6 5.1e-05 23.2 0.6 2.1 1 1 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 CTQ27978.1 - 1.1e-05 25.2 0.0 2.6e-05 24.0 0.0 1.7 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M20 PF01546.28 CTQ27979.1 - 7.4e-31 107.5 3.4 1.1e-30 106.9 3.4 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ27979.1 - 5.3e-11 42.4 0.2 1.2e-10 41.3 0.2 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain LysR_substrate PF03466.20 CTQ27980.1 - 1.7e-37 128.8 0.0 2.5e-37 128.3 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ27980.1 - 7.9e-19 67.4 0.9 7.9e-19 67.4 0.9 2.4 3 0 0 3 3 3 1 Bacterial regulatory helix-turn-helix protein, lysR family Smr PF01713.21 CTQ27981.1 - 3.5e-18 65.7 0.0 5.3e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 Smr domain ClpS PF02617.17 CTQ27981.1 - 0.13 12.1 0.1 4.5 7.1 0.0 2.2 2 0 0 2 2 2 0 ATP-dependent Clp protease adaptor protein ClpS Helo_like_N PF17111.5 CTQ27981.1 - 0.14 11.5 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins IclR PF01614.18 CTQ27982.1 - 1.1e-34 119.1 0.1 1.7e-34 118.4 0.1 1.3 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 CTQ27982.1 - 1.1e-13 50.7 0.0 3.3e-13 49.2 0.0 1.9 1 0 0 1 1 1 1 IclR helix-turn-helix domain Rrf2 PF02082.20 CTQ27982.1 - 5e-06 26.8 0.0 7.1e-05 23.1 0.0 2.4 2 0 0 2 2 2 1 Transcriptional regulator TrmB PF01978.19 CTQ27982.1 - 0.00028 20.7 0.0 0.00098 19.0 0.0 1.9 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 CTQ27982.1 - 0.00089 18.8 0.0 0.032 13.8 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ27982.1 - 0.0012 18.7 0.1 0.0044 16.9 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_9 PF08221.11 CTQ27982.1 - 0.0022 18.0 0.0 0.0083 16.2 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_5 PF01022.20 CTQ27982.1 - 0.0094 15.8 0.0 0.024 14.5 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 CTQ27982.1 - 0.01 15.8 0.0 0.024 14.6 0.0 1.6 1 0 0 1 1 1 0 HTH domain RP-C PF03428.13 CTQ27982.1 - 0.017 14.8 0.0 0.038 13.7 0.0 1.5 1 0 0 1 1 1 0 Replication protein C N-terminal domain RPA_C PF08784.11 CTQ27982.1 - 0.08 13.6 0.0 0.28 11.9 0.0 1.8 2 0 0 2 2 2 0 Replication protein A C terminal CoA_trans PF01144.23 CTQ27983.1 - 1.6e-69 233.6 0.1 1.8e-69 233.4 0.1 1.0 1 0 0 1 1 1 1 Coenzyme A transferase CoA_trans PF01144.23 CTQ27984.1 - 1.5e-38 132.4 0.0 1.7e-38 132.2 0.0 1.0 1 0 0 1 1 1 1 Coenzyme A transferase Thiolase_N PF00108.23 CTQ27985.1 - 5.9e-74 248.7 0.1 7.9e-74 248.3 0.1 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 CTQ27985.1 - 1.6e-44 150.5 1.4 2.8e-44 149.7 1.4 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 CTQ27985.1 - 2.8e-06 27.1 0.3 7.3e-06 25.7 0.3 1.7 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Lyase_1 PF00206.20 CTQ27986.1 - 5.3e-53 180.4 0.0 8.3e-53 179.8 0.0 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 CTQ27986.1 - 5e-17 62.2 0.4 1.6e-16 60.6 0.4 2.0 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus UCR_Fe-S_N PF10399.9 CTQ27986.1 - 0.0024 17.2 0.4 0.0078 15.5 0.4 1.8 1 0 0 1 1 1 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Abhydrolase_1 PF00561.20 CTQ27987.1 - 3e-19 69.7 0.0 8.3e-11 42.0 0.1 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CTQ27987.1 - 1.3e-13 50.8 0.3 2e-13 50.2 0.3 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 CTQ27987.1 - 4.3e-13 50.4 4.8 5.7e-13 50.0 4.8 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 CTQ27987.1 - 4.1e-06 25.7 0.0 5.4e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 Ndr family Abhydrolase_4 PF08386.10 CTQ27987.1 - 0.011 15.9 0.1 0.061 13.4 0.0 2.1 2 0 0 2 2 2 0 TAP-like protein DUF3323 PF11796.8 CTQ27987.1 - 0.018 15.0 1.6 0.039 13.8 1.6 1.5 1 0 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) Esterase PF00756.20 CTQ27987.1 - 0.026 14.2 0.3 0.071 12.7 0.1 1.8 1 1 0 2 2 2 0 Putative esterase Peptidase_S9 PF00326.21 CTQ27987.1 - 0.032 13.7 0.0 0.92 8.9 0.0 2.2 2 0 0 2 2 2 0 Prolyl oligopeptidase family Ser_hydrolase PF06821.13 CTQ27987.1 - 0.062 13.2 0.2 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 Serine hydrolase CMD PF02627.20 CTQ27988.1 - 7.1e-24 83.7 0.1 1e-23 83.2 0.1 1.2 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family MS_channel PF00924.18 CTQ27989.1 - 4e-28 98.4 0.1 6.6e-28 97.7 0.1 1.4 1 0 0 1 1 1 1 Mechanosensitive ion channel Fumerase_C PF05683.12 CTQ27990.1 - 2.8e-88 294.6 0.0 4.6e-88 293.9 0.0 1.4 1 0 0 1 1 1 1 Fumarase C-terminus Fumerase PF05681.14 CTQ27990.1 - 6.4e-86 288.1 0.0 8.4e-86 287.7 0.0 1.1 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) Myosin_head PF00063.21 CTQ27990.1 - 0.062 11.5 0.0 0.11 10.7 0.0 1.3 1 0 0 1 1 1 0 Myosin head (motor domain) LolA PF03548.15 CTQ27990.1 - 0.15 11.8 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 Outer membrane lipoprotein carrier protein LolA Na_sulph_symp PF00939.19 CTQ27991.1 - 5.1e-150 500.6 40.9 5.9e-150 500.4 40.9 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 CTQ27991.1 - 3.4e-10 39.6 38.1 3.4e-10 39.6 38.1 3.1 1 1 2 3 3 3 2 Citrate transporter DUF4181 PF13789.6 CTQ27991.1 - 3.7 7.9 11.5 0.2 11.9 0.5 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4181) FAD_binding_2 PF00890.24 CTQ27993.1 - 2.6e-87 293.6 8.5 4.2e-87 292.9 8.5 1.3 1 0 0 1 1 1 1 FAD binding domain Oxidored_FMN PF00724.20 CTQ27993.1 - 7.4e-73 245.8 0.0 1.3e-72 245.0 0.0 1.4 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family FAD_oxidored PF12831.7 CTQ27993.1 - 2.4e-15 56.8 1.3 4.4e-15 56.0 1.3 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 CTQ27993.1 - 4.7e-12 46.2 1.5 3.2e-10 40.1 0.5 2.8 2 1 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 CTQ27993.1 - 1.5e-10 40.3 2.5 1.5e-10 40.3 2.5 2.3 2 1 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 CTQ27993.1 - 1.1e-08 34.7 5.6 3.1e-05 23.3 0.7 2.4 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ27993.1 - 2.8e-06 27.8 1.3 0.041 14.5 0.6 2.9 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ27993.1 - 3.5e-06 27.1 0.2 1.1e-05 25.6 0.2 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FMN_bind PF04205.14 CTQ27993.1 - 3.7e-06 27.4 0.9 2.5e-05 24.7 0.4 2.6 2 0 0 2 2 2 1 FMN-binding domain GIDA PF01134.22 CTQ27993.1 - 7.5e-06 25.3 5.3 0.00079 18.6 1.5 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_binding_3 PF01494.19 CTQ27993.1 - 2e-05 24.0 0.4 4.4e-05 22.9 0.4 1.5 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 CTQ27993.1 - 3.2e-05 23.3 1.0 0.0056 16.0 0.3 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 CTQ27993.1 - 0.0069 15.7 0.9 0.0069 15.7 0.9 3.3 3 0 0 3 3 3 1 Thi4 family MCRA PF06100.11 CTQ27993.1 - 0.011 14.6 0.7 1.3 7.7 0.0 2.1 2 0 0 2 2 2 0 MCRA family Amino_oxidase PF01593.24 CTQ27993.1 - 0.024 13.9 0.9 1.4 8.1 0.0 2.3 1 1 1 2 2 2 0 Flavin containing amine oxidoreductase DHO_dh PF01180.21 CTQ27993.1 - 0.026 13.8 0.0 0.076 12.2 0.0 1.8 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase Lycopene_cycl PF05834.12 CTQ27993.1 - 0.13 11.3 1.4 0.24 10.4 1.4 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein Ribosomal_S9 PF00380.19 CTQ27993.1 - 0.57 10.7 3.7 5.4 7.6 2.3 3.0 2 1 0 2 2 2 0 Ribosomal protein S9/S16 ApbE PF02424.15 CTQ27994.1 - 1.3e-75 254.3 0.0 1.6e-75 254.0 0.0 1.0 1 0 0 1 1 1 1 ApbE family Gene66 PF02053.15 CTQ27994.1 - 0.046 13.4 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Gene 66 (IR5) protein Response_reg PF00072.24 CTQ27995.1 - 4.8e-21 75.0 0.1 7.1e-21 74.5 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain CitT PF12431.8 CTQ27995.1 - 0.00022 21.5 0.1 0.00053 20.3 0.1 1.7 1 0 0 1 1 1 1 Transcriptional regulator sCache_3_2 PF17203.4 CTQ27996.1 - 3.3e-23 82.4 0.8 3.9e-20 72.4 0.5 2.3 2 0 0 2 2 2 2 Single cache domain 3 HATPase_c PF02518.26 CTQ27996.1 - 8.9e-17 61.6 0.0 2.9e-16 59.9 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPOB_a PF14689.6 CTQ27996.1 - 2.8e-09 36.5 0.3 6.3e-09 35.4 0.3 1.5 1 0 0 1 1 1 1 Sensor_kinase_SpoOB-type, alpha-helical domain PAS PF00989.25 CTQ27996.1 - 1.3e-07 31.6 0.0 1.9e-06 27.9 0.0 2.4 2 0 0 2 2 2 1 PAS fold HATPase_c_5 PF14501.6 CTQ27996.1 - 2.7e-06 27.2 0.0 5.8e-06 26.1 0.0 1.5 1 0 0 1 1 1 1 GHKL domain sCache_3_3 PF17202.4 CTQ27996.1 - 6.2e-06 26.6 0.0 0.16 12.4 0.0 2.8 2 1 1 3 3 3 2 Single cache domain 3 dCache_3 PF14827.6 CTQ27996.1 - 8.7e-05 22.3 0.1 0.037 13.7 0.0 2.6 2 0 0 2 2 2 2 Double sensory domain of two-component sensor kinase dCache_1 PF02743.18 CTQ27996.1 - 0.00028 20.8 0.0 0.0052 16.6 0.0 2.7 3 1 0 3 3 3 1 Cache domain PAS_4 PF08448.10 CTQ27996.1 - 0.00043 20.5 0.1 0.053 13.8 0.0 3.3 2 1 0 2 2 2 1 PAS fold HATPase_c_3 PF13589.6 CTQ27996.1 - 0.0017 18.2 0.0 0.0029 17.4 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 CTQ27996.1 - 0.0077 16.2 0.0 0.019 15.0 0.0 1.6 1 0 0 1 1 1 1 PAS domain HemY_N PF07219.13 CTQ27996.1 - 0.16 12.1 3.0 0.38 11.0 0.2 2.2 2 0 0 2 2 2 0 HemY protein N-terminus CBP_GIL PF10995.8 CTQ27997.1 - 0.0052 15.5 1.0 0.0052 15.5 1.0 1.2 1 0 0 1 1 1 1 Cellulose biosynthesis GIL SIS_2 PF13580.6 CTQ27998.1 - 3.3e-07 30.4 0.1 7.3e-07 29.3 0.1 1.6 1 1 0 1 1 1 1 SIS domain SIS PF01380.22 CTQ27998.1 - 1.6e-06 28.0 0.2 2.1e-05 24.4 0.0 2.2 1 1 1 2 2 2 1 SIS domain Mqo PF06039.15 CTQ27999.1 - 6.3e-229 760.5 0.2 7.3e-229 760.3 0.2 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) DAO PF01266.24 CTQ27999.1 - 1.7e-08 34.4 0.0 2.8e-08 33.7 0.0 1.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase K_oxygenase PF13434.6 CTQ27999.1 - 0.0017 17.6 0.0 0.01 15.0 0.0 2.0 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 CTQ27999.1 - 0.0087 15.3 0.0 0.015 14.6 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 CTQ27999.1 - 0.036 13.3 0.0 0.41 9.8 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase LysR_substrate PF03466.20 CTQ28000.1 - 1.4e-34 119.3 0.2 1.9e-34 118.9 0.2 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28000.1 - 9.2e-09 35.1 0.0 1.9e-08 34.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Acyl_transf_1 PF00698.21 CTQ28001.1 - 8.5e-23 81.3 1.5 1.3e-22 80.7 1.5 1.3 1 1 0 1 1 1 1 Acyl transferase domain SAT PF16073.5 CTQ28001.1 - 0.098 12.4 0.4 0.41 10.3 0.3 2.0 2 0 0 2 2 2 0 Starter unit:ACP transacylase in aflatoxin biosynthesis MdcG PF10620.9 CTQ28002.1 - 6.8e-53 179.4 9.7 7.6e-53 179.3 9.7 1.0 1 0 0 1 1 1 1 Phosphoribosyl-dephospho-CoA transferase MdcG Mem_trans PF03547.18 CTQ28003.1 - 3.9e-62 209.9 30.8 7.9e-36 123.3 5.7 2.0 1 1 1 2 2 2 2 Membrane transport protein PIRT PF15099.6 CTQ28003.1 - 8.5 6.0 8.3 0.58 9.7 1.6 2.3 3 0 0 3 3 3 0 Phosphoinositide-interacting protein family MdcE PF06833.11 CTQ28004.1 - 1.1e-102 342.5 1.8 1.2e-102 342.3 1.8 1.0 1 0 0 1 1 1 1 Malonate decarboxylase gamma subunit (MdcE) Carboxyl_trans PF01039.22 CTQ28004.1 - 0.0072 15.0 2.1 0.009 14.7 2.1 1.1 1 0 0 1 1 1 1 Carboxyl transferase domain Carboxyl_trans PF01039.22 CTQ28005.1 - 2.7e-16 59.3 0.2 3.4e-16 58.9 0.2 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain ACP PF06857.11 CTQ28006.1 - 1.2e-19 70.3 0.0 1.4e-19 70.1 0.0 1.0 1 0 0 1 1 1 1 Malonate decarboxylase delta subunit (MdcD) CitG PF01874.16 CTQ28007.1 - 1.6e-70 237.9 10.3 2.1e-70 237.6 10.3 1.1 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase Mal_decarbox_Al PF16957.5 CTQ28008.1 - 2e-295 980.3 0.0 2.3e-295 980.1 0.0 1.0 1 0 0 1 1 1 1 Malonate decarboxylase, alpha subunit, transporter CoA_trans PF01144.23 CTQ28008.1 - 0.0062 16.0 0.0 0.012 15.0 0.0 1.5 1 0 0 1 1 1 1 Coenzyme A transferase AI-2E_transport PF01594.16 CTQ28009.1 - 1.2e-69 235.0 44.9 1.4e-69 234.8 44.9 1.0 1 0 0 1 1 1 1 AI-2E family transporter Multi_Drug_Res PF00893.19 CTQ28011.1 - 9.2e-25 87.1 13.5 9.2e-25 87.1 13.5 1.3 1 1 0 1 1 1 1 Small Multidrug Resistance protein UPF0060 PF02694.15 CTQ28011.1 - 0.048 13.9 10.0 0.055 13.7 10.0 1.0 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family CRT-like PF08627.10 CTQ28011.1 - 0.15 11.0 5.5 0.16 10.9 5.5 1.0 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like EamA PF00892.20 CTQ28011.1 - 0.43 10.8 19.3 0.68 10.1 19.3 1.4 1 1 0 1 1 1 0 EamA-like transporter family Multi_Drug_Res PF00893.19 CTQ28012.1 - 4.4e-28 97.8 7.5 5.5e-28 97.5 7.5 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 CTQ28012.1 - 0.00029 21.0 9.8 0.00037 20.7 9.8 1.2 1 0 0 1 1 1 1 EamA-like transporter family TMEM234 PF10639.9 CTQ28012.1 - 0.0021 18.1 0.1 0.0025 17.8 0.1 1.2 1 1 0 1 1 1 1 Putative transmembrane family 234 Nuc_sug_transp PF04142.15 CTQ28012.1 - 0.057 12.6 0.5 0.057 12.6 0.5 1.7 1 1 1 2 2 2 0 Nucleotide-sugar transporter DUF3493 PF11998.8 CTQ28012.1 - 0.084 13.0 1.1 0.084 13.0 1.1 2.3 1 1 1 2 2 2 0 Low psii accumulation1 / Rep27 UPF0060 PF02694.15 CTQ28012.1 - 0.12 12.6 9.5 0.24 11.7 9.6 1.5 1 1 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family DUF4064 PF13273.6 CTQ28012.1 - 0.33 11.3 12.9 1.2 9.4 1.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) DUF805 PF05656.14 CTQ28012.1 - 2.1 8.8 7.1 9.5 6.7 7.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF805) DUF751 PF05421.11 CTQ28012.1 - 3.2 8.6 6.5 0.27 12.0 1.1 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF751) Trypsin PF00089.26 CTQ28013.1 - 1.2e-08 35.0 0.1 3e-07 30.5 0.1 2.3 1 1 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 CTQ28013.1 - 7.1e-07 30.2 0.0 1.1e-06 29.6 0.0 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain DUF5545 PF17699.1 CTQ28013.1 - 0.049 13.5 0.0 0.072 12.9 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5545) SLC12 PF03522.15 CTQ28016.1 - 3.7 6.5 13.3 4.1 6.3 13.3 1.0 1 0 0 1 1 1 0 Solute carrier family 12 MMR1 PF08505.10 CTQ28016.1 - 4 7.7 16.5 6.8 6.9 16.5 1.3 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein Presenilin PF01080.17 CTQ28016.1 - 4.5 5.9 16.8 5.1 5.7 16.8 1.1 1 0 0 1 1 1 0 Presenilin CCSAP PF15748.5 CTQ28016.1 - 7.7 6.6 27.2 8.7 6.4 27.2 1.0 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated Peptidase_M32 PF02074.15 CTQ28018.1 - 9.7e-170 565.5 0.0 1.1e-169 565.3 0.0 1.0 1 0 0 1 1 1 1 Carboxypeptidase Taq (M32) metallopeptidase MFS_1 PF07690.16 CTQ28019.1 - 1.7e-36 125.9 66.2 2.3e-28 99.1 29.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28019.1 - 4.6e-10 38.9 14.9 4.6e-10 38.9 14.9 2.1 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 CTQ28019.1 - 0.0015 17.4 10.1 0.0015 17.4 10.1 2.9 2 2 1 3 3 3 3 MFS_1 like family LysR_substrate PF03466.20 CTQ28020.1 - 2.2e-43 148.1 2.9 3.1e-43 147.6 2.9 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28020.1 - 3.1e-22 78.3 3.0 5e-22 77.6 1.4 2.2 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family ROK PF00480.20 CTQ28021.1 - 4.6e-51 174.0 0.0 5.8e-51 173.7 0.0 1.1 1 0 0 1 1 1 1 ROK family Fe_dep_repress PF01325.19 CTQ28021.1 - 0.0011 19.1 0.0 0.0025 18.0 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 CTQ28021.1 - 0.0018 18.1 0.0 0.006 16.5 0.0 1.9 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 CTQ28021.1 - 0.007 16.2 0.1 0.017 15.0 0.1 1.7 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 CTQ28021.1 - 0.077 13.5 0.0 0.22 12.1 0.0 1.8 1 0 0 1 1 1 0 Winged helix DNA-binding domain AAA_26 PF13500.6 CTQ28022.1 - 7.5e-31 107.5 0.0 8.6e-31 107.3 0.0 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 CTQ28022.1 - 1.7e-12 47.5 0.0 2.3e-12 47.1 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF1611 PF07755.11 CTQ28022.1 - 0.001 18.4 0.1 0.0021 17.4 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1611_C) P-loop domain Voltage_CLC PF00654.20 CTQ28023.1 - 3.9e-72 243.4 39.0 3.9e-72 243.4 39.0 2.0 1 1 1 2 2 2 2 Voltage gated chloride channel Nitrate_red_del PF02613.15 CTQ28024.1 - 3.5e-23 82.1 0.3 5.6e-23 81.5 0.3 1.4 1 0 0 1 1 1 1 Nitrate reductase delta subunit Pilt PF15453.6 CTQ28024.1 - 0.52 9.6 1.0 0.65 9.3 1.0 1.1 1 0 0 1 1 1 0 Protein incorporated later into Tight Junctions DmsC PF04976.12 CTQ28025.1 - 1.4e-89 300.2 20.0 1.6e-89 300.1 20.0 1.0 1 0 0 1 1 1 1 DMSO reductase anchor subunit (DmsC) DUF2613 PF11021.8 CTQ28025.1 - 4.2 7.6 11.1 1.7 8.8 0.3 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF2613) DUF4345 PF14248.6 CTQ28025.1 - 8.3 6.3 31.8 0.32 10.9 2.7 3.7 1 1 1 3 3 3 0 Domain of unknown function (DUF4345) Molybdopterin PF00384.22 CTQ28026.1 - 1e-90 304.8 0.0 1.2e-90 304.5 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ28026.1 - 1.1e-28 99.5 0.0 2.7e-28 98.2 0.0 1.7 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 CTQ28026.1 - 4.9e-14 52.1 1.0 9.2e-14 51.2 1.0 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain DUF1161 PF06649.12 CTQ28027.1 - 7.6e-21 74.1 0.1 9.2e-21 73.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1161) UPF0257 PF06788.13 CTQ28028.1 - 2.1e-119 397.6 0.2 2.3e-119 397.5 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0257) Acetyltransf_3 PF13302.7 CTQ28029.1 - 4.5e-21 76.0 0.0 5.4e-21 75.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ28029.1 - 5.9e-14 52.3 0.2 8.7e-14 51.8 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ28029.1 - 3e-08 34.0 0.1 6e-08 33.0 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 CTQ28029.1 - 2.7e-07 30.4 0.0 8.3e-07 28.8 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ28029.1 - 4e-06 26.8 0.1 5.7e-06 26.3 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ28029.1 - 1.3e-05 25.0 0.0 2.6e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 CTQ28029.1 - 0.00069 19.8 0.3 0.00087 19.5 0.3 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 CTQ28029.1 - 0.017 14.7 0.0 0.044 13.3 0.0 1.6 1 1 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_15 PF17013.5 CTQ28029.1 - 0.071 12.6 0.1 0.24 10.9 0.1 1.6 1 1 0 1 1 1 0 Putative acetyl-transferase DUF1283 PF06932.11 CTQ28030.1 - 7.9e-42 141.4 6.0 9.7e-42 141.1 6.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1283) RXLR PF16810.5 CTQ28030.1 - 0.0097 16.4 0.4 0.012 16.1 0.4 1.1 1 0 0 1 1 1 1 RXLR phytopathogen effector protein, Avirulence activity TSP_3 PF02412.18 CTQ28030.1 - 0.093 12.4 1.1 0.15 11.8 1.1 1.3 1 0 0 1 1 1 0 Thrombospondin type 3 repeat UPF0060 PF02694.15 CTQ28032.1 - 7.4e-45 151.6 10.5 8e-45 151.5 10.5 1.0 1 0 0 1 1 1 1 Uncharacterised BCR, YnfA/UPF0060 family MFS_1 PF07690.16 CTQ28033.1 - 2.3e-56 191.3 57.3 6.2e-54 183.2 35.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 CTQ28033.1 - 0.00023 19.6 8.0 0.017 13.5 0.0 3.4 2 2 1 3 3 3 3 Organic Anion Transporter Polypeptide (OATP) family DUF4381 PF14316.6 CTQ28033.1 - 0.0029 17.9 1.6 0.0029 17.9 1.6 2.2 1 1 0 2 2 2 1 Domain of unknown function (DUF4381) DUF2905 PF11146.8 CTQ28033.1 - 0.45 10.7 5.8 14 6.0 0.1 3.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2905) Mannitol_dh_C PF08125.13 CTQ28034.1 - 1.6e-94 316.0 0.0 2.1e-94 315.6 0.0 1.2 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 CTQ28034.1 - 5.4e-50 169.5 0.0 8.5e-50 168.8 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain Usp PF00582.26 CTQ28035.1 - 5.5e-26 91.8 0.0 6.3e-26 91.6 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family TetR_C_9 PF14514.6 CTQ28035.1 - 0.075 13.2 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain FCD PF07729.12 CTQ28036.1 - 4.6e-23 82.0 8.3 6.9e-23 81.4 8.3 1.2 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 CTQ28036.1 - 2.9e-17 62.0 0.1 1.2e-16 60.1 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 CTQ28036.1 - 0.098 12.9 0.0 0.24 11.6 0.0 1.7 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain adh_short PF00106.25 CTQ28037.1 - 2.6e-53 180.4 0.0 3.2e-53 180.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ28037.1 - 2.9e-37 128.5 0.0 3.5e-37 128.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ28037.1 - 1.6e-11 44.4 0.0 2.3e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ28037.1 - 1.6e-06 27.7 0.2 7.6e-06 25.6 0.1 2.2 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 CTQ28037.1 - 8.2e-05 22.6 0.1 9.7e-05 22.3 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 CTQ28037.1 - 0.00023 20.4 0.0 0.00051 19.3 0.0 1.6 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein F420_oxidored PF03807.17 CTQ28037.1 - 0.00026 21.5 0.2 0.00065 20.2 0.0 1.7 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent RmlD_sub_bind PF04321.17 CTQ28037.1 - 0.009 15.1 0.0 0.016 14.3 0.0 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 CTQ28037.1 - 0.018 14.6 0.0 0.028 14.0 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family Glyco_hydro_101 PF12905.7 CTQ28037.1 - 0.065 12.6 0.0 0.17 11.3 0.0 1.6 2 0 0 2 2 2 0 Endo-alpha-N-acetylgalactosaminidase Maf_N PF08383.11 CTQ28037.1 - 0.099 12.4 0.4 12 5.7 0.4 2.5 1 1 1 2 2 2 0 Maf N-terminal region Sacchrp_dh_NADP PF03435.18 CTQ28037.1 - 0.1 12.9 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Peptidase_M3 PF01432.20 CTQ28038.1 - 6.8e-133 444.3 0.1 8.5e-133 444.0 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M3 SnoaL_2 PF12680.7 CTQ28039.1 - 7e-06 26.6 0.1 8.3e-06 26.4 0.1 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 CTQ28039.1 - 0.031 14.1 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase HTH_18 PF12833.7 CTQ28040.1 - 6.1e-26 90.5 0.6 1.4e-25 89.3 0.6 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ28040.1 - 2.3e-13 49.9 0.0 3.7e-06 26.9 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 CTQ28040.1 - 3.2e-07 30.3 0.3 6.6e-07 29.3 0.1 1.7 2 1 0 2 2 2 1 AraC-like ligand binding domain Cupin_2 PF07883.11 CTQ28040.1 - 0.00028 20.5 0.4 0.00045 19.9 0.4 1.2 1 0 0 1 1 1 1 Cupin domain HTH_23 PF13384.6 CTQ28040.1 - 0.0016 18.2 0.6 0.76 9.6 0.0 2.5 2 0 0 2 2 2 2 Homeodomain-like domain HTH_28 PF13518.6 CTQ28040.1 - 0.019 15.1 0.4 5.5 7.2 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain SRAP PF02586.14 CTQ28041.1 - 5e-49 166.8 0.0 5.6e-49 166.6 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) GerE PF00196.19 CTQ28042.1 - 1.6e-12 46.7 0.4 1.6e-12 46.7 0.4 1.9 3 0 0 3 3 3 1 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 CTQ28042.1 - 0.0014 18.3 0.0 0.0041 16.9 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_40 PF14493.6 CTQ28042.1 - 0.0038 17.7 0.2 0.017 15.6 0.3 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_38 PF13936.6 CTQ28042.1 - 0.0077 16.0 0.2 0.033 14.0 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain DUF3342 PF11822.8 CTQ28042.1 - 0.023 14.9 0.0 0.051 13.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) HTH_50 PF18024.1 CTQ28042.1 - 0.023 14.3 0.1 0.047 13.3 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 CTQ28042.1 - 0.027 14.5 0.0 0.054 13.5 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix HTH_24 PF13412.6 CTQ28042.1 - 0.082 12.5 0.0 0.24 11.0 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 CTQ28042.1 - 0.11 12.3 0.0 0.3 10.8 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 Terminase_5 PF06056.12 CTQ28042.1 - 0.22 11.4 0.2 0.57 10.1 0.0 1.8 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) HSP20 PF00011.21 CTQ28045.1 - 2.1e-14 53.5 0.0 2.6e-14 53.2 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 CTQ28045.1 - 0.00089 18.8 0.0 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CinA PF02464.17 CTQ28046.1 - 9.8e-51 171.4 3.2 1.1e-50 171.2 3.2 1.0 1 0 0 1 1 1 1 Competence-damaged protein EAL PF00563.20 CTQ28047.1 - 2.5e-46 158.1 0.0 4.1e-46 157.4 0.0 1.3 1 0 0 1 1 1 1 EAL domain BLUF PF04940.12 CTQ28047.1 - 2.6e-22 78.7 0.0 4.7e-22 77.9 0.0 1.4 1 0 0 1 1 1 1 Sensors of blue-light using FAD Rz1 PF06085.11 CTQ28047.1 - 0.5 10.2 2.5 1.2 8.9 2.5 1.6 1 0 0 1 1 1 0 Lipoprotein Rz1 precursor GerE PF00196.19 CTQ28049.1 - 3.2e-12 45.8 0.1 5.2e-12 45.1 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 CTQ28049.1 - 0.0038 17.0 0.0 0.0086 15.8 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.12 CTQ28049.1 - 0.068 13.1 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_40 PF14493.6 CTQ28049.1 - 0.083 13.3 0.1 0.26 11.8 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 CTQ28049.1 - 0.085 12.5 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_24 PF13412.6 CTQ28049.1 - 0.14 11.8 0.1 0.45 10.1 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 CTQ28049.1 - 0.19 11.3 0.0 0.35 10.4 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_18 PF12833.7 CTQ28050.1 - 6.4e-16 58.4 0.5 1e-15 57.7 0.5 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ28050.1 - 2.3e-08 33.9 0.3 2.5e-07 30.6 0.1 2.4 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family GyrI-like PF06445.15 CTQ28050.1 - 1.7e-05 25.2 0.0 3.7e-05 24.1 0.0 1.7 2 0 0 2 2 2 1 GyrI-like small molecule binding domain Cass2 PF14526.6 CTQ28050.1 - 0.0018 18.4 0.0 0.0025 18.0 0.0 1.3 1 0 0 1 1 1 1 Integron-associated effector binding protein HTH_36 PF13730.6 CTQ28050.1 - 0.017 15.0 0.0 0.05 13.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain GntP_permease PF02447.16 CTQ28051.1 - 1e-128 429.8 46.7 1.2e-128 429.5 46.7 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 CTQ28051.1 - 1.8e-14 53.7 46.5 7.4e-14 51.6 46.5 1.9 1 1 0 1 1 1 1 Citrate transporter UPF0767 PF15990.5 CTQ28051.1 - 0.12 12.5 0.0 0.33 11.1 0.0 1.7 1 0 0 1 1 1 0 UPF0767 family Na_H_antiport_2 PF13726.6 CTQ28051.1 - 2 8.6 27.9 1.3 9.2 2.7 3.3 3 0 0 3 3 3 0 Na+-H+ antiporter family AP_endonuc_2 PF01261.24 CTQ28052.1 - 8.4e-37 126.7 0.2 9.9e-37 126.4 0.2 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Aldolase_II PF00596.21 CTQ28053.1 - 1.5e-41 142.4 0.0 1.7e-41 142.2 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain SBD_N PF07005.11 CTQ28054.1 - 2.6e-65 220.4 0.1 6.7e-65 219.0 0.0 1.7 2 0 0 2 2 2 1 Sugar-binding N-terminal domain NBD_C PF17042.5 CTQ28054.1 - 2.4e-38 132.3 0.1 4.3e-38 131.5 0.1 1.4 1 0 0 1 1 1 1 Nucleotide-binding C-terminal domain YAcAr PF10686.9 CTQ28054.1 - 0.084 12.8 0.3 0.77 9.7 0.2 2.6 2 0 0 2 2 2 0 YspA, cpYpsA-related SLOG family NAD_binding_2 PF03446.15 CTQ28055.1 - 1.3e-36 126.2 3.5 1.9e-36 125.6 3.5 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 CTQ28055.1 - 7.5e-35 119.8 0.3 7.5e-35 119.8 0.3 2.2 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 3HCDH_N PF02737.18 CTQ28055.1 - 5.1e-05 23.2 0.6 0.0002 21.3 0.6 2.0 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 CTQ28055.1 - 0.00049 19.5 0.1 0.00088 18.7 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 CTQ28055.1 - 0.001 19.6 0.3 0.003 18.1 0.1 1.9 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 CTQ28055.1 - 0.0092 15.6 0.1 0.25 10.9 0.1 2.3 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 CTQ28055.1 - 0.015 15.6 0.0 0.034 14.4 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain GIDA PF01134.22 CTQ28055.1 - 0.89 8.6 3.4 1.2 8.1 3.4 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A DeoRC PF00455.22 CTQ28056.1 - 1.6e-50 171.2 0.6 2.5e-50 170.5 0.6 1.3 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ28056.1 - 4.7e-18 64.7 1.0 1.2e-17 63.3 1.0 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ28056.1 - 1.5e-10 40.8 0.3 2.8e-10 40.0 0.3 1.4 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 CTQ28056.1 - 1.1e-05 24.9 0.6 4.5e-05 22.9 0.3 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 CTQ28056.1 - 5.6e-05 23.0 0.4 0.00014 21.7 0.1 1.8 2 0 0 2 2 2 1 MarR family GntR PF00392.21 CTQ28056.1 - 6.2e-05 22.6 0.5 0.00014 21.4 0.5 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 CTQ28056.1 - 0.00013 21.8 2.2 0.00032 20.5 0.8 2.3 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 CTQ28056.1 - 0.00018 21.5 0.6 0.001 19.1 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain Rrf2 PF02082.20 CTQ28056.1 - 0.00025 21.3 0.2 0.00066 20.0 0.2 1.7 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 CTQ28056.1 - 0.00034 20.7 0.4 0.00074 19.7 0.1 1.7 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain PaaX PF07848.12 CTQ28056.1 - 0.00049 20.3 0.2 0.00091 19.4 0.2 1.5 1 0 0 1 1 1 1 PaaX-like protein DUF1670 PF07900.11 CTQ28056.1 - 0.0011 18.4 0.2 0.0017 17.8 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) AbiEi_4 PF13338.6 CTQ28056.1 - 0.0023 18.1 0.1 0.0095 16.1 0.1 2.2 2 0 0 2 2 2 1 Transcriptional regulator, AbiEi antitoxin HTH_5 PF01022.20 CTQ28056.1 - 0.0026 17.6 0.2 0.011 15.5 0.2 2.1 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF977 PF06163.11 CTQ28056.1 - 0.0069 16.3 0.2 0.017 15.0 0.2 1.6 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF977) HTH_23 PF13384.6 CTQ28056.1 - 0.0096 15.7 0.1 0.023 14.5 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Mga PF08280.11 CTQ28056.1 - 0.013 15.5 0.0 0.029 14.4 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain TrmB PF01978.19 CTQ28056.1 - 0.034 14.0 0.2 0.067 13.1 0.2 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 CTQ28056.1 - 0.059 13.4 0.3 0.25 11.4 0.3 2.1 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.6 CTQ28056.1 - 0.06 13.5 0.0 0.18 12.0 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 CTQ28056.1 - 0.067 13.0 0.3 0.19 11.6 0.3 1.8 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain DUF370 PF04025.12 CTQ28056.1 - 0.13 12.4 0.2 0.66 10.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF370) MerR PF00376.23 CTQ28056.1 - 0.2 11.5 0.3 1.8 8.4 0.1 2.7 2 1 0 2 2 2 0 MerR family regulatory protein Sigma70_r4 PF04545.16 CTQ28056.1 - 0.87 9.2 5.3 0.16 11.6 0.4 2.3 3 0 0 3 3 3 0 Sigma-70, region 4 Beta-lactamase2 PF13354.6 CTQ28057.1 - 4.6e-37 127.6 0.1 5.7e-37 127.3 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 CTQ28057.1 - 4e-32 111.8 0.5 8.7e-32 110.7 0.5 1.5 1 1 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 CTQ28057.1 - 0.0029 17.1 0.0 0.004 16.6 0.0 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Exonuc_VIII PF06630.11 CTQ28058.1 - 0.053 13.4 0.0 0.061 13.2 0.0 1.1 1 0 0 1 1 1 0 Enterobacterial exodeoxyribonuclease VIII AAA_21 PF13304.6 CTQ28059.1 - 6.8e-26 91.8 1.3 1.2e-24 87.7 1.3 2.1 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 CTQ28059.1 - 3.6e-19 69.7 0.0 4.2e-11 43.2 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 CTQ28059.1 - 4.4e-13 49.2 0.0 1.4e-08 34.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CTQ28059.1 - 5.1e-09 36.9 0.0 7.5e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 CTQ28059.1 - 4.3e-05 24.0 0.0 0.0009 19.8 0.0 2.3 1 1 0 1 1 1 1 ABC transporter AAA_25 PF13481.6 CTQ28059.1 - 0.017 14.7 0.0 0.036 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_27 PF13514.6 CTQ28059.1 - 0.024 14.2 0.0 0.051 13.2 0.0 1.5 2 0 0 2 2 2 0 AAA domain DUF2813 PF11398.8 CTQ28059.1 - 0.03 13.6 0.2 0.052 12.8 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) AAA_29 PF13555.6 CTQ28059.1 - 0.076 12.8 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain LacY_symp PF01306.19 CTQ28060.1 - 3.8e-206 684.7 29.8 4.6e-206 684.4 29.8 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1 PF07690.16 CTQ28060.1 - 7.4e-23 81.0 47.0 2.1e-22 79.5 42.3 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ28060.1 - 3.5e-20 72.2 30.8 3.4e-19 69.0 30.5 2.1 1 1 0 1 1 1 1 MFS_1 like family Halogen_Hydrol PF10112.9 CTQ28060.1 - 1.8 8.6 4.4 25 4.8 0.1 2.9 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Glyco_hydro_2_C PF02836.17 CTQ28061.1 - 1.5e-112 375.6 0.0 2e-112 375.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Glyco_hydro_2_N PF02837.18 CTQ28061.1 - 1e-57 194.7 0.2 2.6e-57 193.4 0.1 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 2, sugar binding domain Bgal_small_N PF02929.17 CTQ28061.1 - 1.6e-57 194.9 0.0 2.6e-57 194.2 0.0 1.3 1 0 0 1 1 1 1 Beta galactosidase small chain DUF4981 PF16353.5 CTQ28061.1 - 1.5e-16 60.7 0.0 4.3e-16 59.2 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function(DUF4981) Glyco_hydro_2 PF00703.21 CTQ28061.1 - 9.5e-11 42.3 0.0 1.9e-10 41.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 2 Peripla_BP_3 PF13377.6 CTQ28062.1 - 8.3e-32 110.8 0.1 8.3e-32 110.8 0.1 2.0 2 1 0 2 2 2 1 Periplasmic binding protein-like domain LacI PF00356.21 CTQ28062.1 - 1.1e-19 69.9 0.7 8.7e-19 67.1 0.7 2.2 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family Peripla_BP_1 PF00532.21 CTQ28062.1 - 4.5e-16 59.1 0.0 5.8e-16 58.7 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 CTQ28062.1 - 3.5e-10 39.9 0.0 5.6e-10 39.2 0.0 1.4 1 1 0 1 1 1 1 Periplasmic binding protein domain HTH_31 PF13560.6 CTQ28062.1 - 0.00011 22.4 1.5 0.00054 20.3 1.5 2.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ28062.1 - 0.0011 19.0 0.1 0.009 16.0 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix HTH_35 PF13693.6 CTQ28062.1 - 0.0011 18.9 0.1 0.0056 16.7 0.1 2.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 CTQ28062.1 - 0.0047 16.9 0.4 0.054 13.5 0.4 2.5 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_23 PF13384.6 CTQ28062.1 - 0.0049 16.6 1.9 0.019 14.8 0.2 2.8 2 0 0 2 2 2 1 Homeodomain-like domain MarR_2 PF12802.7 CTQ28062.1 - 0.0078 16.1 0.2 0.041 13.8 0.2 2.4 1 0 0 1 1 1 1 MarR family HTH_Tnp_ISL3 PF13542.6 CTQ28062.1 - 0.013 14.9 0.1 0.06 12.8 0.2 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_10 PF04967.12 CTQ28062.1 - 0.014 15.2 0.0 0.041 13.7 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain OKR_DC_1_N PF03709.15 CTQ28062.1 - 0.047 14.0 0.0 12 6.2 0.0 2.7 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain HTH_26 PF13443.6 CTQ28062.1 - 0.054 13.9 0.1 0.27 11.7 0.0 2.2 2 0 0 2 2 1 0 Cro/C1-type HTH DNA-binding domain Mannitol_dh PF01232.23 CTQ28062.1 - 0.057 13.6 0.1 0.4 10.8 0.0 2.2 2 1 0 2 2 2 0 Mannitol dehydrogenase Rossmann domain HTH_38 PF13936.6 CTQ28062.1 - 0.067 13.0 0.2 0.2 11.4 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 CTQ28062.1 - 0.072 12.6 0.1 0.23 11.0 0.1 1.9 1 0 0 1 1 1 0 Sigma-70, region 4 TetR_N PF00440.23 CTQ28062.1 - 0.088 12.6 0.1 0.22 11.3 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family TrmB PF01978.19 CTQ28062.1 - 0.14 12.0 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_AraC PF00165.23 CTQ28062.1 - 0.19 11.9 0.0 0.37 10.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family YdaS_antitoxin PF15943.5 CTQ28062.1 - 0.19 11.6 1.6 0.2 11.6 0.1 1.8 2 0 0 2 2 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_IclR PF09339.10 CTQ28062.1 - 0.98 9.3 5.8 4.3 7.2 0.1 3.6 3 0 0 3 3 3 0 IclR helix-turn-helix domain Acetyltransf_10 PF13673.7 CTQ28063.1 - 2.9e-11 43.4 0.1 3.5e-11 43.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ28063.1 - 9.9e-11 41.9 0.1 1.3e-10 41.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ28063.1 - 5.3e-09 36.4 0.1 9e-09 35.6 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ28063.1 - 6.9e-06 26.2 0.1 4.2e-05 23.6 0.1 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ28063.1 - 0.032 14.2 0.0 0.057 13.4 0.0 1.5 1 0 0 1 1 1 0 FR47-like protein Dzip-like_N PF13815.6 CTQ28063.1 - 0.073 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal DUF4177 PF13783.6 CTQ28064.1 - 2.9e-09 37.1 0.0 3.2e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4177) HTH_18 PF12833.7 CTQ28065.1 - 3.7e-22 78.4 3.2 6.3e-22 77.6 3.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain DJ-1_PfpI PF01965.24 CTQ28065.1 - 6.7e-16 58.5 0.0 9.2e-16 58.1 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family HTH_AraC PF00165.23 CTQ28065.1 - 1.2e-14 54.0 0.2 3.2e-06 27.1 0.1 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family TetR_N PF00440.23 CTQ28065.1 - 0.00096 18.9 0.3 1.9 8.4 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory proteins, tetR family DUF3046 PF11248.8 CTQ28065.1 - 0.06 13.7 0.4 5.3 7.5 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3046) Rhodanese PF00581.20 CTQ28066.1 - 3.5e-06 27.5 0.0 5.1e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain Meth_synt_2 PF01717.18 CTQ28067.1 - 1.6e-05 24.4 0.0 1.6e-05 24.3 0.0 1.0 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain PdxA PF04166.12 CTQ28068.1 - 1.5e-75 254.3 0.1 1.6e-75 254.1 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA DeoRC PF00455.22 CTQ28069.1 - 5.2e-48 163.0 0.0 7.5e-48 162.5 0.0 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ28069.1 - 3.2e-17 62.0 0.2 6.3e-17 61.1 0.2 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain DprA_WH PF17782.1 CTQ28069.1 - 3.2e-05 23.9 0.6 0.00039 20.5 0.0 2.5 2 0 0 2 2 2 1 DprA winged helix domain HTH_11 PF08279.12 CTQ28069.1 - 6.6e-05 22.8 0.0 0.00023 21.0 0.0 1.9 2 0 0 2 2 2 1 HTH domain HTH_5 PF01022.20 CTQ28069.1 - 0.0018 18.1 0.0 0.0043 16.9 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family GntR PF00392.21 CTQ28069.1 - 0.0031 17.1 0.1 0.0085 15.7 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family Replic_Relax PF13814.6 CTQ28069.1 - 0.012 15.7 0.0 0.022 14.8 0.0 1.4 1 0 0 1 1 1 0 Replication-relaxation Fe_dep_repress PF01325.19 CTQ28069.1 - 0.025 14.8 0.0 0.045 14.0 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_9 PF08221.11 CTQ28069.1 - 0.029 14.5 0.1 0.11 12.6 0.0 2.1 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Rrf2 PF02082.20 CTQ28069.1 - 0.082 13.3 0.0 0.31 11.4 0.0 2.0 1 0 0 1 1 1 0 Transcriptional regulator Ldh_1_N PF00056.23 CTQ28070.1 - 9.8e-33 113.2 0.1 1.7e-32 112.5 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 CTQ28070.1 - 4.7e-20 72.2 0.0 1e-19 71.1 0.0 1.5 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Shikimate_DH PF01488.20 CTQ28070.1 - 0.00016 21.7 0.0 0.00025 21.1 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 CTQ28070.1 - 0.00021 21.8 0.2 0.00041 20.9 0.2 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 CTQ28070.1 - 0.0011 19.2 0.1 0.0025 18.1 0.1 1.7 1 0 0 1 1 1 1 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 CTQ28070.1 - 0.0048 16.5 0.1 0.0096 15.5 0.1 1.6 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 CTQ28070.1 - 0.0066 16.9 0.0 0.012 16.0 0.0 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding DAO PF01266.24 CTQ28070.1 - 0.023 14.3 0.2 0.057 13.0 0.0 1.8 3 0 0 3 3 3 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 CTQ28070.1 - 0.024 13.9 0.3 0.037 13.3 0.3 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain CoA_binding PF02629.19 CTQ28070.1 - 0.037 14.7 0.1 0.097 13.4 0.1 1.8 1 0 0 1 1 1 0 CoA binding domain 3HCDH_N PF02737.18 CTQ28070.1 - 0.044 13.7 0.2 0.067 13.1 0.2 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 CTQ28070.1 - 0.048 14.5 0.0 0.085 13.7 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Sacchrp_dh_NADP PF03435.18 CTQ28070.1 - 0.065 13.5 0.1 0.13 12.6 0.1 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 CTQ28070.1 - 0.11 12.2 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Acetyltransf_1 PF00583.25 CTQ28071.1 - 2.7e-14 53.4 0.0 3.4e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ28071.1 - 6.1e-11 42.6 0.0 7.4e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ28071.1 - 4.2e-09 36.4 0.0 5.6e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ28071.1 - 2.1e-06 27.6 0.0 3.2e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 CTQ28071.1 - 0.0095 16.1 0.0 0.019 15.1 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase LysR_substrate PF03466.20 CTQ28072.1 - 1.4e-43 148.7 0.4 2.1e-43 148.2 0.4 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28072.1 - 9.6e-18 63.9 2.1 1e-17 63.8 0.5 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family Aldedh PF00171.22 CTQ28073.1 - 2.9e-139 464.5 1.1 3.6e-139 464.2 1.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family baeRF_family2 PF18844.1 CTQ28073.1 - 0.036 14.1 2.9 0.086 12.9 0.1 2.7 3 0 0 3 3 3 0 Bacterial archaeo-eukaryotic release factor family 2 Glutaminase PF04960.15 CTQ28074.1 - 4.2e-113 377.3 0.0 4.8e-113 377.1 0.0 1.0 1 0 0 1 1 1 1 Glutaminase 30K_MP_core PF17644.1 CTQ28074.1 - 0.064 13.1 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Core domain of 30K viral movement proteins DUF4186 PF13811.6 CTQ28075.1 - 2.4e-51 172.3 0.0 2.8e-51 172.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4186) GGDEF PF00990.21 CTQ28076.1 - 7e-29 100.7 0.1 9.5e-29 100.2 0.1 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Acetyltransf_1 PF00583.25 CTQ28077.1 - 2.7e-12 46.9 0.0 3.3e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ28077.1 - 3.2e-12 46.5 0.0 4.1e-12 46.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ28077.1 - 1.2e-08 35.3 0.0 1.6e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ28077.1 - 2.4e-05 24.4 0.0 5.2e-05 23.3 0.0 1.6 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ28077.1 - 5.7e-05 23.3 0.0 7.8e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ28077.1 - 9.2e-05 22.3 0.0 0.00015 21.7 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 CTQ28077.1 - 0.0041 16.8 0.1 0.0049 16.6 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_CG PF14542.6 CTQ28077.1 - 0.0054 16.8 0.0 0.0089 16.1 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Abhydrolase_9 PF10081.9 CTQ28077.1 - 0.032 13.3 0.0 0.42 9.6 0.0 2.0 2 0 0 2 2 2 0 Alpha/beta-hydrolase family Acetyltransf_13 PF13880.6 CTQ28077.1 - 0.12 12.3 0.1 0.25 11.4 0.1 1.5 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Anticodon_1 PF08264.13 CTQ28077.1 - 0.2 11.6 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA Mannitol_dh_C PF08125.13 CTQ28078.1 - 8.5e-76 254.7 0.0 1.1e-75 254.3 0.0 1.1 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 CTQ28078.1 - 1.1e-39 136.0 0.0 8.3e-39 133.2 0.0 2.3 3 0 0 3 3 3 1 Mannitol dehydrogenase Rossmann domain Acetyltransf_1 PF00583.25 CTQ28079.1 - 1.8e-12 47.5 0.0 2.2e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ28079.1 - 3.7e-09 36.9 0.0 4.6e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ28079.1 - 5.3e-07 29.6 0.0 6.5e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ28079.1 - 4.4e-05 23.4 0.0 7.3e-05 22.7 0.0 1.4 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 CTQ28079.1 - 0.00011 22.9 0.0 0.00015 22.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ28079.1 - 0.002 18.2 0.0 0.0029 17.7 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase NAT PF04768.13 CTQ28079.1 - 0.01 15.5 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase Nop10p PF04135.12 CTQ28079.1 - 0.047 13.7 0.1 0.081 13.0 0.1 1.5 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family Tautomerase_2 PF14552.6 CTQ28080.1 - 1.2e-05 25.3 0.1 1.3e-05 25.2 0.1 1.0 1 0 0 1 1 1 1 Tautomerase enzyme DUF2207 PF09972.9 CTQ28082.1 - 0.37 9.5 8.6 0.42 9.3 8.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) T6SS_HCP PF05638.12 CTQ28083.1 - 6.5e-28 97.7 0.0 7.3e-28 97.6 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion system effector, Hcp Tautomerase_2 PF14552.6 CTQ28084.1 - 1.5e-26 92.3 0.1 2e-26 91.9 0.1 1.2 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase PF01361.21 CTQ28084.1 - 0.01 15.8 0.0 0.18 11.7 0.0 2.2 1 1 0 2 2 2 1 Tautomerase enzyme CMD PF02627.20 CTQ28085.1 - 3.1e-20 72.0 0.1 3.8e-20 71.7 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family DUF5476 PF17570.2 CTQ28085.1 - 0.085 13.3 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5476) Methyltransf_23 PF13489.6 CTQ28086.1 - 3.1e-13 49.9 0.0 4.2e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ28086.1 - 8.4e-12 45.6 0.0 1.3e-11 45.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ28086.1 - 5.4e-10 39.3 0.0 7.1e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ28086.1 - 1.4e-09 38.5 0.0 2.4e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ28086.1 - 8.5e-09 36.1 0.0 1.3e-08 35.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 CTQ28086.1 - 0.006 16.7 0.0 0.0082 16.3 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase MTS PF05175.14 CTQ28086.1 - 0.017 14.6 0.0 0.026 14.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_4 PF02390.17 CTQ28086.1 - 0.018 14.5 0.0 6.5 6.2 0.0 2.2 2 0 0 2 2 2 0 Putative methyltransferase DUF3843 PF12954.7 CTQ28086.1 - 0.052 12.5 0.0 0.067 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3843) DUF4350 PF14258.6 CTQ28086.1 - 0.13 12.7 0.0 0.35 11.3 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) DUF3265 PF11665.8 CTQ28087.1 - 0.05 13.8 0.3 0.084 13.1 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3265) MFS_1 PF07690.16 CTQ28089.1 - 7e-27 94.3 61.1 1.5e-13 50.4 32.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ28091.1 - 1.1e-80 271.7 45.1 1.3e-80 271.4 45.1 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1 PF07690.16 CTQ28091.1 - 8.9e-14 51.2 60.8 3.4e-12 46.0 44.1 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily GPDPase_memb PF10110.9 CTQ28091.1 - 0.00041 19.2 0.2 0.00041 19.2 0.2 2.2 2 1 1 3 3 3 1 Membrane domain of glycerophosphoryl diester phosphodiesterase LysR_substrate PF03466.20 CTQ28092.1 - 2.3e-26 92.4 3.2 3.6e-26 91.8 3.2 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28092.1 - 3e-18 65.5 3.0 4.8e-18 64.9 0.6 2.5 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_20 PF12840.7 CTQ28092.1 - 0.011 15.7 0.5 0.045 13.8 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 CTQ28092.1 - 0.062 12.9 0.1 0.2 11.2 0.1 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 CTQ28092.1 - 0.093 12.7 0.2 0.26 11.2 0.1 1.7 2 0 0 2 2 2 0 MarR family NMO PF03060.15 CTQ28093.1 - 2.9e-76 257.0 0.1 3.4e-76 256.8 0.1 1.0 1 0 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.25 CTQ28093.1 - 9.9e-06 24.8 0.6 0.0016 17.6 0.0 2.4 2 1 1 3 3 3 2 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 CTQ28093.1 - 0.0003 20.0 0.9 0.00048 19.4 0.0 1.7 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 CTQ28093.1 - 0.00082 18.8 1.0 0.0022 17.4 0.2 2.0 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 CTQ28093.1 - 0.0033 16.9 0.0 0.0054 16.2 0.0 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein TMP-TENI PF02581.17 CTQ28093.1 - 0.023 14.0 0.5 0.023 14.0 0.5 2.1 2 1 0 2 2 2 0 Thiamine monophosphate synthase DHO_dh PF01180.21 CTQ28093.1 - 0.075 12.2 0.2 0.12 11.6 0.2 1.3 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase Dus PF01207.17 CTQ28093.1 - 0.088 11.9 0.1 0.17 10.9 0.0 1.5 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) FMN_dh PF01070.18 CTQ28093.1 - 0.1 11.6 5.2 0.046 12.7 1.5 2.0 2 0 0 2 2 2 0 FMN-dependent dehydrogenase BPD_transp_1 PF00528.22 CTQ28094.1 - 2.2e-20 73.2 13.9 2.2e-20 73.2 13.9 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 CTQ28095.1 - 1.8e-34 119.2 0.0 2.7e-34 118.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28095.1 - 5.2e-07 29.8 0.3 0.022 14.6 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28095.1 - 7.1e-05 22.3 0.4 0.00093 18.7 0.4 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ28095.1 - 0.00026 21.4 1.2 0.00054 20.4 1.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ28095.1 - 0.00027 21.2 0.9 0.0044 17.3 0.9 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ28095.1 - 0.004 16.9 0.2 0.009 15.7 0.2 1.7 1 1 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ28095.1 - 0.012 15.6 0.0 0.021 14.7 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 CTQ28095.1 - 0.015 15.8 0.1 0.027 15.0 0.1 1.3 1 0 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 CTQ28095.1 - 0.016 14.0 0.8 2.2 7.0 0.2 2.2 2 0 0 2 2 2 0 Predicted ATPase of the ABC class MMR_HSR1 PF01926.23 CTQ28095.1 - 0.023 14.8 0.2 0.041 14.0 0.2 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase SbcCD_C PF13558.6 CTQ28095.1 - 0.036 14.3 0.6 0.23 11.7 0.6 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TniB PF05621.11 CTQ28095.1 - 0.044 13.2 0.1 0.64 9.4 0.1 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_30 PF13604.6 CTQ28095.1 - 0.1 12.3 0.6 0.58 9.8 0.6 2.0 1 1 0 1 1 1 0 AAA domain Lipoprotein_9 PF03180.14 CTQ28096.1 - 2.8e-76 255.7 0.6 3.2e-76 255.5 0.6 1.0 1 0 0 1 1 1 1 NLPA lipoprotein DIOX_N PF14226.6 CTQ28097.1 - 8.3e-38 129.8 0.0 1.6e-37 128.8 0.0 1.5 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal 2OG-FeII_Oxy PF03171.20 CTQ28097.1 - 1.3e-19 70.5 0.0 3.5e-19 69.2 0.0 1.7 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily VF530 PF09905.9 CTQ28098.1 - 8.6e-34 115.5 0.0 1.3e-33 115.0 0.0 1.2 1 0 0 1 1 1 1 DNA-binding protein VF530 3-HAO PF06052.12 CTQ28099.1 - 3.6e-05 23.5 0.0 4.6e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 3-hydroxyanthranilic acid dioxygenase Cupin_2 PF07883.11 CTQ28099.1 - 5.7e-05 22.8 0.4 7.3e-05 22.4 0.4 1.3 1 0 0 1 1 1 1 Cupin domain cNMP_binding PF00027.29 CTQ28099.1 - 0.0044 17.1 0.0 0.0053 16.8 0.0 1.3 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain Peptidase_M23 PF01551.22 CTQ28099.1 - 0.055 13.7 0.1 0.1 12.8 0.1 1.5 2 0 0 2 2 2 0 Peptidase family M23 CE2_N PF17996.1 CTQ28099.1 - 0.14 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Carbohydrate esterase 2 N-terminal Glyoxalase_3 PF13468.6 CTQ28100.1 - 7.7e-41 140.1 1.4 1.2e-40 139.5 1.4 1.3 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 CTQ28100.1 - 0.019 15.2 0.1 0.98 9.7 0.0 2.4 2 1 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.25 CTQ28100.1 - 0.034 14.3 0.0 0.21 11.8 0.0 2.2 2 1 1 3 3 3 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Cupin_6 PF12852.7 CTQ28101.1 - 9.1e-31 107.0 0.4 1.2e-30 106.6 0.4 1.2 1 0 0 1 1 1 1 Cupin HTH_18 PF12833.7 CTQ28101.1 - 2.3e-19 69.4 3.1 3.3e-19 68.9 2.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ28101.1 - 6.9e-16 57.9 0.0 2.3e-07 30.8 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 CTQ28101.1 - 7.9e-05 22.6 0.0 0.00065 19.6 0.0 2.2 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_2 PF07883.11 CTQ28101.1 - 0.0023 17.6 0.0 0.0053 16.4 0.0 1.6 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 CTQ28101.1 - 0.003 17.2 0.0 0.006 16.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) MFS_1 PF07690.16 CTQ28102.1 - 1.7e-33 116.0 70.1 4.3e-32 111.4 60.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28102.1 - 6.6e-10 38.4 15.6 6.6e-10 38.4 15.6 2.9 1 1 2 3 3 3 2 Sugar (and other) transporter MFS_1_like PF12832.7 CTQ28102.1 - 0.12 11.3 34.7 0.22 10.4 12.0 2.1 1 1 1 2 2 2 0 MFS_1 like family Fer2 PF00111.27 CTQ28103.1 - 6.7e-12 45.2 1.3 1.4e-11 44.1 1.3 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_1 PF00175.21 CTQ28103.1 - 1.3e-05 25.8 0.1 8.6e-05 23.1 0.0 2.3 2 1 0 2 2 2 1 Oxidoreductase NAD-binding domain Fer2_4 PF13510.6 CTQ28103.1 - 0.0027 17.7 0.0 0.05 13.7 0.0 2.3 1 1 1 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_6 PF08030.12 CTQ28103.1 - 0.004 17.3 0.3 0.56 10.3 0.3 2.6 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Rieske PF00355.26 CTQ28104.1 - 3.4e-17 62.1 0.1 5.9e-17 61.4 0.1 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain LysR_substrate PF03466.20 CTQ28105.1 - 5e-33 114.2 5.5 6.8e-33 113.8 5.5 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28105.1 - 3.5e-18 65.3 0.4 1.2e-17 63.6 0.4 1.9 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_50 PF18024.1 CTQ28105.1 - 0.014 15.0 0.1 0.028 14.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_30 PF13556.6 CTQ28105.1 - 0.025 14.4 0.0 0.084 12.7 0.0 1.8 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 CTQ28105.1 - 0.026 13.9 0.0 0.066 12.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_28 PF13518.6 CTQ28105.1 - 0.052 13.7 2.5 0.069 13.3 0.0 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain FAD_binding_3 PF01494.19 CTQ28106.1 - 3.1e-21 76.0 0.0 3.7e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Amino_oxidase PF01593.24 CTQ28106.1 - 1.9e-07 30.8 0.0 0.0018 17.7 0.0 2.2 1 1 1 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 CTQ28106.1 - 8.1e-06 26.0 0.2 2e-05 24.7 0.2 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 CTQ28106.1 - 2e-05 24.0 0.1 0.0036 16.6 0.7 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 CTQ28106.1 - 0.00034 19.8 1.5 0.00053 19.2 1.5 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 CTQ28106.1 - 0.0015 17.8 0.1 0.021 14.1 0.6 2.0 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ28106.1 - 0.017 14.2 1.1 0.025 13.7 1.1 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A DAO PF01266.24 CTQ28106.1 - 0.024 14.2 2.0 0.12 11.9 1.0 2.1 2 0 0 2 2 2 0 FAD dependent oxidoreductase HI0933_like PF03486.14 CTQ28106.1 - 0.087 11.5 1.1 0.17 10.5 0.7 1.6 2 0 0 2 2 2 0 HI0933-like protein NAD_binding_9 PF13454.6 CTQ28106.1 - 0.13 12.2 0.7 26 4.8 0.0 3.0 3 0 0 3 3 3 0 FAD-NAD(P)-binding Xan_ur_permease PF00860.20 CTQ28107.1 - 5.9e-82 275.4 35.5 8.3e-82 274.9 35.5 1.1 1 0 0 1 1 1 1 Permease family YfhO PF09586.10 CTQ28107.1 - 0.27 9.4 0.2 0.41 8.8 0.2 1.2 1 0 0 1 1 1 0 Bacterial membrane protein YfhO OHCU_decarbox PF09349.10 CTQ28108.1 - 7.2e-39 133.8 2.5 8e-39 133.6 2.5 1.0 1 0 0 1 1 1 1 OHCU decarboxylase DUF935 PF06074.12 CTQ28108.1 - 0.0051 15.6 1.2 0.0058 15.4 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF935) DUF2336 PF10098.9 CTQ28108.1 - 0.0067 15.9 7.3 0.0097 15.4 7.3 1.2 1 0 0 1 1 1 1 Uncharacterised protein conserved in bacteria (DUF2336) Transthyretin PF00576.21 CTQ28109.1 - 3.2e-24 85.7 0.0 3.6e-24 85.6 0.0 1.0 1 0 0 1 1 1 1 HIUase/Transthyretin family CarboxypepD_reg PF13620.6 CTQ28109.1 - 8.4e-06 26.0 0.1 1e-05 25.7 0.1 1.2 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain bMG3 PF11974.8 CTQ28109.1 - 9.1e-05 22.4 0.0 0.00011 22.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial alpha-2-macroglobulin MG3 domain Big_3_5 PF16640.5 CTQ28109.1 - 0.0021 18.2 0.5 0.0031 17.7 0.5 1.2 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 3) CarbopepD_reg_2 PF13715.6 CTQ28109.1 - 0.049 13.6 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 CarboxypepD_reg-like domain Big_1 PF02369.16 CTQ28109.1 - 0.06 13.4 0.1 0.073 13.1 0.1 1.2 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) SpaA PF17802.1 CTQ28109.1 - 0.078 13.3 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Prealbumin-like fold domain SdrD_B PF17210.3 CTQ28109.1 - 0.13 12.5 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 SdrD B-like domain phage_tail_N PF08400.10 CTQ28109.1 - 0.15 12.0 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Prophage tail fibre N-terminal DUF3244 PF11589.8 CTQ28109.1 - 0.18 11.9 0.0 0.34 11.0 0.0 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3244) HTH_3 PF01381.22 CTQ28110.1 - 5.7e-12 45.5 0.0 9.1e-12 44.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 CTQ28110.1 - 3e-08 33.6 0.0 3.8e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 CTQ28110.1 - 4.3e-08 33.0 0.1 5.3e-08 32.7 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 CTQ28110.1 - 6.6e-08 32.8 0.0 7.9e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 CTQ28110.1 - 2e-05 24.9 0.0 2.8e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain MarR PF01047.22 CTQ28110.1 - 0.0065 16.4 0.2 0.033 14.1 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_25 PF13413.6 CTQ28110.1 - 0.015 15.1 0.0 0.024 14.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 CTQ28110.1 - 0.071 12.7 0.2 0.27 10.8 0.1 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF1400 PF07176.11 CTQ28110.1 - 0.088 13.1 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1400) YdaS_antitoxin PF15943.5 CTQ28110.1 - 0.099 12.5 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HipA_C PF07804.12 CTQ28111.1 - 5.3e-52 176.6 0.0 6.9e-52 176.2 0.0 1.1 1 0 0 1 1 1 1 HipA-like C-terminal domain Couple_hipA PF13657.6 CTQ28111.1 - 5.8e-25 87.8 0.0 1.2e-24 86.8 0.0 1.6 1 0 0 1 1 1 1 HipA N-terminal domain CotH PF08757.11 CTQ28111.1 - 0.0071 15.9 0.0 0.073 12.6 0.0 2.2 2 0 0 2 2 2 1 CotH kinase protein GHL10 PF02638.15 CTQ28112.1 - 4e-116 387.5 1.8 5e-116 387.1 1.8 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase-like 10 Melibiase PF02065.18 CTQ28112.1 - 8.3e-05 21.7 0.0 0.00013 21.0 0.0 1.3 1 0 0 1 1 1 1 Melibiase DUF4434 PF14488.6 CTQ28112.1 - 0.0032 17.5 0.0 0.0075 16.3 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4434) Glyco_hydro_66 PF13199.6 CTQ28112.1 - 0.057 12.1 0.0 0.086 11.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 66 Fimbrial PF00419.20 CTQ28113.1 - 5.7e-13 49.4 0.0 8.5e-13 48.8 0.0 1.2 1 0 0 1 1 1 1 Fimbrial protein FimA PF16970.5 CTQ28113.1 - 0.092 12.9 0.4 11 6.3 0.0 2.3 2 0 0 2 2 2 0 Type-1 fimbrial protein, A Usher PF00577.20 CTQ28114.1 - 4.2e-168 560.7 12.2 5e-168 560.4 12.2 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_N PF13954.6 CTQ28114.1 - 1.9e-39 135.0 0.0 3.6e-39 134.1 0.0 1.5 1 0 0 1 1 1 1 PapC N-terminal domain PapC_C PF13953.6 CTQ28114.1 - 2.5e-20 72.1 0.0 7e-20 70.6 0.0 1.8 1 0 0 1 1 1 1 PapC C-terminal domain DUF884 PF05959.11 CTQ28114.1 - 0.18 11.4 0.0 0.34 10.5 0.0 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF884) PapD_N PF00345.20 CTQ28115.1 - 9e-41 138.7 0.0 2.5e-40 137.2 0.0 1.6 2 0 0 2 2 2 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 CTQ28115.1 - 8.5e-14 51.7 0.0 3.1e-13 49.9 0.0 1.9 2 0 0 2 2 2 1 Pili assembly chaperone PapD, C-terminal domain Tad PF13400.6 CTQ28115.1 - 0.051 13.9 0.1 0.11 12.9 0.1 1.5 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like ASH PF15780.5 CTQ28115.1 - 0.14 12.4 0.1 0.35 11.1 0.0 1.7 2 0 0 2 2 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Fimbrial PF00419.20 CTQ28116.1 - 6.4e-19 68.7 6.4 8.7e-19 68.3 6.4 1.2 1 0 0 1 1 1 1 Fimbrial protein FimA PF16970.5 CTQ28116.1 - 0.0011 19.1 3.0 0.0057 16.8 2.4 2.5 1 1 0 1 1 1 1 Type-1 fimbrial protein, A DIM PF08194.12 CTQ28117.1 - 0.048 13.9 1.1 0.1 12.8 1.1 1.6 1 1 0 1 1 1 0 DIM protein Peptidase_M24 PF00557.24 CTQ28118.1 - 6.6e-49 166.4 0.5 7.4e-49 166.3 0.5 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 ParD_like PF11903.8 CTQ28119.1 - 7e-25 86.9 0.1 7.8e-25 86.8 0.1 1.0 1 0 0 1 1 1 1 ParD-like antitoxin of type II bacterial toxin-antitoxin system EAL PF00563.20 CTQ28121.1 - 2.5e-71 240.0 0.0 3.7e-71 239.4 0.0 1.3 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 CTQ28121.1 - 2e-36 125.2 0.0 3.5e-36 124.4 0.0 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_9 PF13426.7 CTQ28121.1 - 2.6e-12 46.9 0.0 6.6e-12 45.6 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 CTQ28121.1 - 9.8e-08 32.0 0.0 2.5e-07 30.7 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 CTQ28121.1 - 0.00087 19.5 0.0 0.0021 18.3 0.0 1.7 1 1 0 1 1 1 1 PAS fold PAS_3 PF08447.12 CTQ28121.1 - 0.0012 19.1 0.2 0.004 17.4 0.1 2.1 2 0 0 2 2 2 1 PAS fold GGDEF_2 PF17853.1 CTQ28121.1 - 0.0099 16.1 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 1 GGDEF-like domain GCH_III PF05165.12 CTQ28121.1 - 0.091 12.0 0.0 0.67 9.2 0.0 2.0 1 1 1 2 2 2 0 GTP cyclohydrolase III Esterase PF00756.20 CTQ28122.1 - 2.7e-12 46.9 0.1 4.5e-12 46.2 0.1 1.4 1 1 0 1 1 1 1 Putative esterase Abhydrolase_6 PF12697.7 CTQ28122.1 - 0.0023 18.6 0.6 0.0023 18.6 0.6 2.1 1 1 1 2 2 2 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 CTQ28122.1 - 0.0088 15.5 0.0 0.03 13.8 0.0 1.7 2 0 0 2 2 2 1 Prolyl oligopeptidase family CBP_BcsF PF11120.8 CTQ28124.1 - 0.3 11.2 5.3 0.074 13.2 2.3 1.6 1 1 1 2 2 2 0 Cellulose biosynthesis protein BcsF PTS_EIIA_2 PF00359.22 CTQ28126.1 - 1e-22 80.6 0.6 1.2e-22 80.4 0.6 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Sugar_tr PF00083.24 CTQ28127.1 - 4.6e-104 348.8 27.9 5.3e-104 348.6 27.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 CTQ28127.1 - 1.2e-34 119.8 46.6 8.4e-30 103.9 21.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 CTQ28127.1 - 3.7e-09 35.6 3.1 3.7e-09 35.6 3.1 2.1 2 0 0 2 2 2 2 Fungal trichothecene efflux pump (TRI12) MscL PF01741.18 CTQ28127.1 - 4.5 7.6 7.3 1.3 9.4 0.0 3.0 3 0 0 3 3 3 0 Large-conductance mechanosensitive channel, MscL Glyco_hydro_4 PF02056.16 CTQ28128.1 - 2.3e-59 200.0 0.0 3.4e-59 199.5 0.0 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Glyco_hydro_4C PF11975.8 CTQ28128.1 - 1.3e-50 172.4 0.0 1.7e-50 172.0 0.0 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain PTS_EIIC PF02378.18 CTQ28129.1 - 7.2e-50 169.8 30.7 9.2e-50 169.5 30.7 1.1 1 0 0 1 1 1 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ28129.1 - 7.1e-11 41.4 5.9 6e-10 38.5 0.1 2.4 2 0 0 2 2 2 2 phosphotransferase system, EIIB UTRA PF07702.13 CTQ28130.1 - 5.8e-33 113.7 0.1 8.7e-33 113.1 0.1 1.2 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 CTQ28130.1 - 5.8e-21 73.9 0.1 1e-20 73.1 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 CTQ28130.1 - 1.3e-05 24.8 0.1 4.5e-05 23.1 0.0 1.8 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ28130.1 - 0.0054 16.6 0.1 0.013 15.4 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_41 PF14502.6 CTQ28130.1 - 0.0067 16.1 0.1 0.014 15.0 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 CTQ28130.1 - 0.07 13.5 0.0 0.16 12.3 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_12 PF08461.10 CTQ28130.1 - 0.071 13.1 0.2 4.2 7.4 0.0 3.0 3 0 0 3 3 3 0 Ribonuclease R winged-helix domain TauE PF01925.19 CTQ28131.1 - 1.5e-32 113.1 35.4 1.8e-32 112.9 35.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE RseC_MucC PF04246.12 CTQ28131.1 - 0.15 12.0 0.0 0.15 12.0 0.0 3.0 2 1 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC LysR_substrate PF03466.20 CTQ28132.1 - 4.9e-39 133.9 7.5 9.5e-39 132.9 7.5 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28132.1 - 1.8e-17 63.0 3.0 5.2e-17 61.5 0.6 2.4 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family Terminase_4 PF05119.12 CTQ28132.1 - 0.0076 16.7 0.1 0.24 11.8 0.0 2.5 2 0 0 2 2 2 1 Phage terminase, small subunit SBP_bac_11 PF13531.6 CTQ28132.1 - 0.071 12.8 1.8 0.15 11.8 1.3 1.9 2 1 0 2 2 2 0 Bacterial extracellular solute-binding protein NAD_binding_2 PF03446.15 CTQ28133.1 - 2.4e-35 122.0 0.1 3.8e-35 121.4 0.1 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 CTQ28133.1 - 2.1e-14 53.8 0.1 4.2e-14 52.8 0.1 1.5 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ApbA PF02558.16 CTQ28133.1 - 2.2e-07 30.6 0.2 1.1e-06 28.4 0.2 2.0 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 CTQ28133.1 - 2.8e-07 31.0 0.2 8e-07 29.6 0.1 1.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 CTQ28133.1 - 3.7e-06 26.6 0.0 8e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 2-Hacid_dh_C PF02826.19 CTQ28133.1 - 1.5e-05 24.5 0.0 2.8e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 CTQ28133.1 - 4.4e-05 23.5 0.4 0.00034 20.6 0.3 2.5 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 CTQ28133.1 - 0.00052 19.9 0.2 0.0031 17.4 0.0 1.8 1 1 1 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 CTQ28133.1 - 0.0019 18.3 0.0 0.0041 17.2 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 CTQ28133.1 - 0.011 16.0 0.0 0.047 13.9 0.0 1.9 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain PDH PF02153.17 CTQ28133.1 - 0.061 12.3 0.0 0.087 11.8 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase NAD_binding_10 PF13460.6 CTQ28133.1 - 0.09 12.7 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 NAD(P)H-binding Diacid_rec PF05651.13 CTQ28134.1 - 9.8e-42 141.8 2.3 1.4e-41 141.3 2.3 1.3 1 0 0 1 1 1 1 Putative sugar diacid recognition HTH_30 PF13556.6 CTQ28134.1 - 7.3e-13 48.1 1.1 1.9e-12 46.8 0.1 2.3 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain GGDEF_2 PF17853.1 CTQ28134.1 - 2.1e-09 37.7 2.0 1.1e-08 35.4 0.6 2.3 2 0 0 2 2 2 1 GGDEF-like domain GAF_2 PF13185.6 CTQ28134.1 - 0.00016 22.0 1.1 0.0013 19.1 0.2 2.4 2 0 0 2 2 2 1 GAF domain HTH_8 PF02954.19 CTQ28134.1 - 0.0013 18.5 0.2 0.005 16.6 0.2 2.1 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family Gly_kinase PF02595.15 CTQ28135.1 - 1.9e-127 425.3 1.7 2.1e-127 425.1 1.7 1.0 1 0 0 1 1 1 1 Glycerate kinase family Succ_CoA_lig PF13607.6 CTQ28135.1 - 0.13 12.1 0.0 0.3 10.9 0.0 1.6 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain MFS_1 PF07690.16 CTQ28136.1 - 4.1e-46 157.5 39.7 1.5e-26 93.2 14.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28136.1 - 1.5e-16 60.4 21.7 3.1e-16 59.3 21.7 1.5 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.6 CTQ28136.1 - 1.9e-12 46.5 13.3 4.9e-12 45.1 13.4 1.7 1 1 0 1 1 1 1 MFS/sugar transport protein MFS_1_like PF12832.7 CTQ28136.1 - 0.0023 16.9 9.7 0.071 11.9 9.7 2.7 1 1 0 1 1 1 1 MFS_1 like family SGL PF08450.12 CTQ28137.1 - 1.1e-78 264.3 0.0 1.2e-78 264.1 0.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region DUF5122 PF17164.4 CTQ28137.1 - 0.067 13.5 0.1 4.8 7.6 0.0 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF5122) beta-propeller MFS_1 PF07690.16 CTQ28138.1 - 4.2e-38 131.2 46.9 4.2e-38 131.2 46.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily ATG22 PF11700.8 CTQ28138.1 - 0.066 11.8 17.2 0.0035 16.0 8.6 2.6 2 1 0 2 2 2 0 Vacuole effluxer Atg22 like Thiolase_N PF00108.23 CTQ28139.1 - 2e-80 269.9 0.1 2.9e-80 269.4 0.1 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 CTQ28139.1 - 6.4e-43 145.3 0.4 6.2e-42 142.1 0.2 2.4 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 CTQ28139.1 - 9.3e-05 22.1 4.2 0.0025 17.4 0.5 3.0 2 1 1 3 3 3 2 Beta-ketoacyl synthase, N-terminal domain HemY_N PF07219.13 CTQ28139.1 - 0.014 15.6 0.1 0.41 10.9 0.0 2.9 3 0 0 3 3 3 0 HemY protein N-terminus ACP_syn_III PF08545.10 CTQ28139.1 - 0.017 15.0 0.8 0.59 10.0 0.1 2.7 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ketoacyl-synt_C PF02801.22 CTQ28139.1 - 0.064 13.3 0.2 9.7 6.2 0.0 3.8 3 1 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain adh_short_C2 PF13561.6 CTQ28140.1 - 4.9e-68 229.2 6.0 5.6e-68 229.0 6.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ28140.1 - 1.1e-62 211.0 2.4 1.4e-62 210.7 2.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ28140.1 - 2.3e-19 70.0 2.3 3.8e-19 69.3 2.3 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ28140.1 - 2.9e-05 23.6 0.8 5.4e-05 22.8 0.2 1.9 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 CTQ28140.1 - 0.0013 18.3 0.7 0.034 13.7 0.5 2.2 2 0 0 2 2 2 1 NmrA-like family ADH_zinc_N PF00107.26 CTQ28140.1 - 0.0076 16.2 2.5 0.11 12.5 1.8 2.6 1 1 1 2 2 2 1 Zinc-binding dehydrogenase B12-binding PF02310.19 CTQ28140.1 - 0.015 15.4 0.2 0.031 14.3 0.2 1.5 1 0 0 1 1 1 0 B12 binding domain 2-Hacid_dh_C PF02826.19 CTQ28140.1 - 0.039 13.3 1.1 0.045 13.1 0.2 1.6 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 CTQ28140.1 - 0.067 13.1 0.2 0.12 12.2 0.2 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CoA_trans PF01144.23 CTQ28141.1 - 3.1e-32 111.7 2.2 4.4e-28 98.2 0.0 2.7 2 1 0 2 2 2 2 Coenzyme A transferase AcetylCoA_hydro PF02550.15 CTQ28141.1 - 0.0014 18.6 0.2 1.5 8.8 0.0 3.2 3 0 0 3 3 3 1 Acetyl-CoA hydrolase/transferase N-terminal domain Mal_decarbox_Al PF16957.5 CTQ28141.1 - 0.019 13.3 0.0 0.031 12.6 0.0 1.2 1 0 0 1 1 1 0 Malonate decarboxylase, alpha subunit, transporter AMP-binding PF00501.28 CTQ28142.1 - 9.5e-80 268.2 0.0 1.1e-79 268.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CTQ28142.1 - 7.5e-17 62.1 0.0 1.6e-16 61.0 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain LysR_substrate PF03466.20 CTQ28143.1 - 7.5e-37 126.7 0.0 2e-36 125.3 0.0 1.6 1 1 1 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28143.1 - 1.4e-16 60.2 1.1 2.3e-16 59.5 1.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ28143.1 - 0.028 14.3 0.1 0.06 13.2 0.1 1.5 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 CTQ28143.1 - 0.083 13.0 2.5 0.78 9.9 0.0 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain CMD PF02627.20 CTQ28145.1 - 6.6e-20 71.0 3.1 8.9e-20 70.5 3.1 1.2 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family HTH_23 PF13384.6 CTQ28145.1 - 0.033 14.0 0.1 0.065 13.1 0.1 1.5 1 0 0 1 1 1 0 Homeodomain-like domain Cupin_7 PF12973.7 CTQ28146.1 - 1.4e-45 153.1 0.0 9.4e-37 124.8 0.0 2.1 2 0 0 2 2 2 2 ChrR Cupin-like domain Cupin_2 PF07883.11 CTQ28146.1 - 0.00016 21.3 3.4 0.00099 18.8 1.5 2.8 2 2 0 2 2 2 1 Cupin domain DUF4863 PF16155.5 CTQ28146.1 - 0.0017 18.3 0.0 0.0026 17.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4863) DUF4437 PF14499.6 CTQ28146.1 - 0.0028 16.8 0.1 0.098 11.8 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4437) DMSP_lyase PF16867.5 CTQ28146.1 - 0.0045 16.7 0.2 0.0085 15.7 0.2 1.4 1 0 0 1 1 1 1 Dimethlysulfonioproprionate lyase Amino_oxidase PF01593.24 CTQ28147.1 - 2.9e-31 109.3 0.0 6.1e-18 65.3 0.0 2.0 1 1 1 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 CTQ28147.1 - 3.5e-15 56.0 0.0 9.4e-15 54.6 0.0 1.8 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 CTQ28147.1 - 7.8e-07 28.7 0.5 1.1e-06 28.1 0.5 1.2 1 0 0 1 1 1 1 FAD binding domain FAD_binding_2 PF00890.24 CTQ28147.1 - 1.8e-05 24.0 0.0 3.9e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 CTQ28147.1 - 9.8e-05 21.9 0.0 0.00013 21.5 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 CTQ28147.1 - 0.00033 19.5 0.3 0.0005 18.9 0.3 1.2 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.17 CTQ28147.1 - 0.00072 18.9 0.2 0.0011 18.3 0.2 1.2 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 CTQ28147.1 - 0.00086 19.0 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 CTQ28147.1 - 0.0054 16.0 0.0 0.006 15.9 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ28147.1 - 0.015 14.4 0.4 0.019 14.0 0.4 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A Lycopene_cycl PF05834.12 CTQ28147.1 - 0.12 11.4 0.0 0.2 10.7 0.0 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein Pyr_redox PF00070.27 CTQ28147.1 - 0.18 12.4 0.4 0.4 11.3 0.4 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ28147.1 - 0.18 11.0 0.6 0.32 10.2 0.6 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ADH_N PF08240.12 CTQ28148.1 - 1.2e-26 92.7 2.1 1.2e-26 92.7 2.1 1.7 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 CTQ28148.1 - 2e-17 63.4 1.1 2.4e-17 63.1 0.2 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 CTQ28148.1 - 4.3e-05 24.6 0.2 0.00011 23.2 0.2 1.8 1 1 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 CTQ28148.1 - 0.00068 19.2 0.7 0.0011 18.5 0.7 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus 2-Hacid_dh_C PF02826.19 CTQ28148.1 - 0.019 14.3 0.3 0.034 13.5 0.3 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 CTQ28148.1 - 0.028 13.7 1.5 0.048 13.0 1.5 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FeoA PF04023.14 CTQ28148.1 - 0.034 14.4 0.2 0.77 10.1 0.0 2.9 3 0 0 3 3 3 0 FeoA domain ELFV_dehydrog PF00208.21 CTQ28148.1 - 0.049 13.4 0.1 0.075 12.7 0.1 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ADH_N_2 PF16884.5 CTQ28148.1 - 0.18 11.7 0.0 0.76 9.7 0.0 2.0 2 0 0 2 2 2 0 N-terminal domain of oxidoreductase ThiF PF00899.21 CTQ28148.1 - 0.19 11.1 0.6 0.33 10.3 0.6 1.3 1 0 0 1 1 1 0 ThiF family Thioredoxin PF00085.20 CTQ28149.1 - 1.3e-27 95.8 0.0 1.4e-27 95.6 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 CTQ28149.1 - 0.00014 22.3 0.0 0.0034 17.8 0.0 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 CTQ28149.1 - 0.00015 22.0 0.0 0.00021 21.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_9 PF14595.6 CTQ28149.1 - 0.00063 19.5 0.0 0.00077 19.2 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 CTQ28149.1 - 0.00069 19.5 0.0 0.00083 19.3 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Glutaredoxin PF00462.24 CTQ28149.1 - 0.0053 16.9 0.0 0.0091 16.2 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_7 PF13899.6 CTQ28149.1 - 0.013 15.6 0.0 0.022 14.9 0.0 1.3 1 1 0 1 1 1 0 Thioredoxin-like Thioredoxin_3 PF13192.6 CTQ28149.1 - 0.02 14.9 0.0 0.026 14.6 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin domain TraF PF13728.6 CTQ28149.1 - 0.034 14.0 0.0 0.04 13.7 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein Redoxin PF08534.10 CTQ28149.1 - 0.039 13.7 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 Redoxin CMD PF02627.20 CTQ28150.1 - 1.2e-07 31.6 0.1 5.3e-07 29.6 0.0 1.9 2 0 0 2 2 2 1 Carboxymuconolactone decarboxylase family Cyt_bd_oxida_I PF01654.17 CTQ28151.1 - 1.5e-160 534.4 24.9 1.7e-160 534.2 24.9 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I Cyt_bd_oxida_II PF02322.15 CTQ28152.1 - 7.4e-94 314.5 34.5 8.4e-94 314.3 34.5 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II LysR_substrate PF03466.20 CTQ28153.1 - 1.1e-34 119.7 0.0 1.3e-34 119.4 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28153.1 - 1.5e-17 63.3 0.1 2.5e-17 62.6 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_29 PF13551.6 CTQ28153.1 - 0.06 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix GerE PF00196.19 CTQ28153.1 - 0.073 12.6 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Trp_Tyr_perm PF03222.13 CTQ28154.1 - 0.00052 19.2 36.1 0.00067 18.8 36.1 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF3899 PF13038.6 CTQ28154.1 - 0.058 13.9 0.3 0.058 13.9 0.3 4.4 3 2 1 4 4 4 0 Domain of unknown function (DUF3899) Aminotran_1_2 PF00155.21 CTQ28155.1 - 6.7e-32 111.0 0.0 8.4e-32 110.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 CTQ28155.1 - 7.1e-08 31.7 0.0 3.7e-07 29.3 0.0 2.0 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase DegT_DnrJ_EryC1 PF01041.17 CTQ28155.1 - 0.0038 16.6 0.0 0.0061 15.9 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 CTQ28156.1 - 3.2e-103 345.2 0.0 4.3e-103 344.8 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 CTQ28156.1 - 0.023 14.0 0.0 0.059 12.7 0.0 1.6 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 CTQ28156.1 - 0.18 10.7 0.0 0.37 9.7 0.0 1.5 2 0 0 2 2 2 0 Aminotransferase class-V LysR_substrate PF03466.20 CTQ28157.1 - 2.1e-28 99.1 0.0 3.5e-28 98.4 0.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28157.1 - 5.6e-18 64.6 1.5 9.5e-18 63.9 1.5 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_5 PF01022.20 CTQ28157.1 - 0.045 13.6 0.4 0.11 12.4 0.4 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 CTQ28157.1 - 0.069 13.2 1.0 0.15 12.1 1.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain PEMT PF04191.13 CTQ28158.1 - 6.9e-13 48.9 1.1 6.9e-13 48.9 1.1 1.7 2 0 0 2 2 2 1 Phospholipid methyltransferase ICMT PF04140.14 CTQ28158.1 - 5.9e-07 29.8 1.2 9.3e-07 29.2 0.3 1.8 1 1 1 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.17 CTQ28158.1 - 5.4e-05 22.1 0.0 6.8e-05 21.8 0.0 1.1 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family DUF1295 PF06966.12 CTQ28158.1 - 0.018 14.6 0.2 0.021 14.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1295) DUF4375 PF14300.6 CTQ28158.1 - 0.024 14.9 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4375) OppC_N PF12911.7 CTQ28158.1 - 4 7.5 6.1 0.64 10.0 0.6 2.5 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C PRA1 PF03208.19 CTQ28158.1 - 4.9 6.8 9.4 2.2 7.9 6.9 1.6 1 1 0 1 1 1 0 PRA1 family protein MFS_1 PF07690.16 CTQ28159.1 - 5.3e-55 186.8 31.1 5.3e-55 186.8 31.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28159.1 - 9.5e-10 37.9 28.3 2.6e-07 29.9 6.7 2.1 1 1 0 2 2 2 2 Sugar (and other) transporter Peptidase_M20 PF01546.28 CTQ28160.1 - 1.5e-34 119.5 0.2 1.8e-34 119.3 0.2 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ28160.1 - 1.9e-13 50.3 0.1 1.8e-12 47.1 0.0 2.3 1 1 1 2 2 2 1 Peptidase dimerisation domain Aldo_ket_red PF00248.21 CTQ28161.1 - 1.6e-57 194.9 0.0 1.9e-57 194.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family GrpB PF04229.14 CTQ28162.1 - 1.1e-32 113.5 0.0 1.2e-32 113.3 0.0 1.0 1 0 0 1 1 1 1 GrpB protein Response_reg PF00072.24 CTQ28163.1 - 2.5e-27 95.3 0.0 6.8e-27 93.9 0.0 1.8 2 0 0 2 2 2 1 Response regulator receiver domain Sigma54_activ_2 PF14532.6 CTQ28163.1 - 8.7e-18 64.8 0.0 1.3e-17 64.2 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 CTQ28163.1 - 2.3e-10 40.1 0.6 7.2e-10 38.5 0.4 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family Sigma54_activat PF00158.26 CTQ28163.1 - 2.8e-09 36.9 0.0 1.8e-06 27.7 0.0 2.4 1 1 1 2 2 2 2 Sigma-54 interaction domain DUF4350 PF14258.6 CTQ28163.1 - 0.0053 17.2 0.0 2.5 8.6 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4350) HATPase_c PF02518.26 CTQ28164.1 - 5.3e-16 59.1 0.0 1.1e-15 58.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ28164.1 - 1.6e-07 31.3 0.3 1.6e-07 31.3 0.3 4.1 4 1 0 4 4 4 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 CTQ28164.1 - 2.4e-06 27.8 1.5 1.8e-05 25.0 0.2 3.3 2 0 0 2 2 2 1 HAMP domain HATPase_c_2 PF13581.6 CTQ28164.1 - 0.00076 19.4 0.0 0.0019 18.2 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 CTQ28164.1 - 0.023 14.6 0.0 0.088 12.7 0.0 1.9 2 0 0 2 2 2 0 GHKL domain 4HB_MCP_1 PF12729.7 CTQ28164.1 - 0.033 13.8 0.1 0.033 13.8 0.1 3.2 3 2 1 4 4 4 0 Four helix bundle sensory module for signal transduction HATPase_c_3 PF13589.6 CTQ28164.1 - 0.046 13.5 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MnmE_helical PF12631.7 CTQ28164.1 - 1 9.5 9.6 0.1 12.8 1.5 2.5 2 1 0 2 2 2 0 MnmE helical domain SPATA1_C PF15743.5 CTQ28164.1 - 1.3 9.1 10.5 2.3 8.3 0.3 2.9 3 0 0 3 3 3 0 Spermatogenesis-associated C-terminus SOAR PF16533.5 CTQ28164.1 - 4.5 7.3 6.4 9.4 6.3 0.2 3.2 3 0 0 3 3 3 0 STIM1 Orai1-activating region SBP_bac_6 PF13343.6 CTQ28165.1 - 2.3e-34 118.9 0.0 2.8e-34 118.6 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 CTQ28165.1 - 2.1e-21 76.7 0.9 3.6e-21 76.0 0.1 1.7 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 CTQ28165.1 - 1.1e-12 48.4 0.0 1.4e-12 48.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ28165.1 - 0.00061 19.8 0.0 0.0017 18.4 0.0 1.7 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein MFS_1 PF07690.16 CTQ28167.1 - 1.6e-47 162.1 38.6 1.1e-46 159.4 32.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 CTQ28167.1 - 0.00015 20.2 2.4 0.00015 20.2 2.4 4.1 3 1 1 4 4 4 3 Organic Anion Transporter Polypeptide (OATP) family LacY_symp PF01306.19 CTQ28167.1 - 0.013 14.3 29.6 0.015 14.1 10.7 3.2 2 2 1 3 3 3 0 LacY proton/sugar symporter MFS_4 PF06779.14 CTQ28167.1 - 0.21 10.9 21.5 2.7 7.2 21.5 2.1 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB LysM PF01476.20 CTQ28168.1 - 1.3e-12 47.6 0.0 2.6e-12 46.6 0.0 1.6 1 0 0 1 1 1 1 LysM domain BON PF04972.17 CTQ28168.1 - 2.7e-10 40.4 4.7 3.7e-10 40.0 4.7 1.2 1 0 0 1 1 1 1 BON domain Phage_tail_X PF05489.12 CTQ28168.1 - 0.12 12.0 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Phage Tail Protein X LysE PF01810.18 CTQ28169.1 - 7.2e-31 107.2 7.3 8.3e-31 107.0 7.3 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 CTQ28169.1 - 0.075 12.7 1.2 0.12 12.0 1.2 1.8 1 1 0 1 1 1 0 Integral membrane protein TerC family PTS_EIIC PF02378.18 CTQ28170.1 - 1.8e-06 27.2 36.2 1.8e-06 27.2 36.2 2.8 1 1 1 2 2 2 1 Phosphotransferase system, EIIC Gag_spuma PF03276.14 CTQ28170.1 - 0.0071 14.8 2.9 0.013 14.0 2.9 1.3 1 0 0 1 1 1 1 Spumavirus gag protein PTS_IIB PF02302.17 CTQ28171.1 - 1.9e-18 66.9 4.6 2.2e-18 66.8 4.6 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit PTS_EIIA_2 PF00359.22 CTQ28172.1 - 8.4e-34 116.5 0.1 9.6e-34 116.4 0.1 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Orthopox_B11R PF07033.11 CTQ28172.1 - 0.069 12.9 0.6 1.3 8.8 0.0 2.4 3 0 0 3 3 3 0 Orthopoxvirus B11R protein Ribul_P_3_epim PF00834.19 CTQ28173.1 - 1.5e-62 210.5 0.1 1.7e-62 210.3 0.1 1.1 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 CTQ28173.1 - 0.0089 15.8 0.1 0.05 13.4 0.0 2.1 1 1 2 3 3 3 1 Quinolinate phosphoribosyl transferase, C-terminal domain EIIC-GAT PF03611.14 CTQ28174.1 - 1.7e-144 481.8 40.1 2e-144 481.6 40.1 1.0 1 0 0 1 1 1 1 PTS system sugar-specific permease component PTS_IIB PF02302.17 CTQ28175.1 - 4.7e-17 62.5 1.0 5.2e-17 62.3 1.0 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF948 PF06103.11 CTQ28175.1 - 0.012 15.9 0.2 0.015 15.6 0.2 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Glucokinase PF02685.16 CTQ28175.1 - 0.055 12.5 0.0 0.056 12.4 0.0 1.0 1 0 0 1 1 1 0 Glucokinase B12-binding PF02310.19 CTQ28175.1 - 0.1 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 B12 binding domain PTS_EIIA_2 PF00359.22 CTQ28176.1 - 9.2e-32 109.9 0.0 1e-31 109.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Peripla_BP_3 PF13377.6 CTQ28177.1 - 1e-25 91.0 0.0 2.1e-25 90.0 0.0 1.5 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ28177.1 - 1.6e-15 57.3 0.0 2e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 CTQ28177.1 - 7e-15 54.6 0.0 1.5e-14 53.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ28177.1 - 1.7e-06 27.8 0.0 5.4e-05 22.9 0.0 2.3 1 1 1 2 2 2 2 Periplasmic binding protein domain HTH_24 PF13412.6 CTQ28177.1 - 0.0039 16.7 0.0 0.01 15.3 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Tnp_ISL3 PF13542.6 CTQ28177.1 - 0.042 13.3 0.7 0.12 11.9 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 CTQ28177.1 - 0.043 13.6 0.0 0.1 12.4 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain GntR PF00392.21 CTQ28177.1 - 0.046 13.4 0.0 0.12 12.0 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Sigma70_r4 PF04545.16 CTQ28177.1 - 0.049 13.2 0.1 0.11 12.0 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_3 PF01381.22 CTQ28177.1 - 0.076 13.1 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix MarR PF01047.22 CTQ28177.1 - 0.085 12.8 0.0 0.51 10.3 0.0 2.1 2 0 0 2 2 2 0 MarR family HTH_Crp_2 PF13545.6 CTQ28177.1 - 0.16 12.0 0.0 0.34 10.9 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_10 PF04967.12 CTQ28177.1 - 0.17 11.7 0.0 0.36 10.7 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_DeoR PF08220.12 CTQ28177.1 - 0.18 11.6 0.0 0.42 10.4 0.0 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Methyltransf_4 PF02390.17 CTQ28177.1 - 0.18 11.2 0.0 1.2 8.5 0.0 2.1 2 0 0 2 2 2 0 Putative methyltransferase MFS_1 PF07690.16 CTQ28180.1 - 9.1e-37 126.8 51.6 1.2e-20 73.8 32.2 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Acetyltransf_3 PF13302.7 CTQ28181.1 - 1e-26 94.3 0.2 1.3e-26 94.0 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ28181.1 - 1.7e-10 41.1 0.1 2.3e-10 40.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 CTQ28181.1 - 2.9e-07 30.3 1.9 1.5e-06 27.9 0.5 2.4 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ28181.1 - 7.7e-07 29.4 0.0 8.9e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ28181.1 - 3.3e-05 23.8 0.1 5.5e-05 23.1 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 CTQ28181.1 - 0.00059 20.2 0.6 0.0014 19.0 0.2 1.7 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ28181.1 - 0.014 15.3 0.5 0.021 14.8 0.5 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 CTQ28181.1 - 0.022 14.3 0.1 0.04 13.5 0.0 1.4 2 0 0 2 2 2 0 GNAT acetyltransferase TetR_N PF00440.23 CTQ28182.1 - 1.7e-13 50.1 0.2 4.4e-13 48.8 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_7 PF02796.15 CTQ28182.1 - 0.00074 19.5 0.0 0.0015 18.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_Tnp_1_2 PF13022.6 CTQ28182.1 - 0.00096 19.3 0.1 0.0021 18.2 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix of insertion element transposase HTH_23 PF13384.6 CTQ28182.1 - 0.018 14.8 0.0 0.048 13.5 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain TetR_C_6 PF13977.6 CTQ28182.1 - 0.023 14.9 0.0 0.041 14.1 0.0 1.4 1 0 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal HTH_AraC PF00165.23 CTQ28182.1 - 0.032 14.4 0.0 0.063 13.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_22 PF13309.6 CTQ28182.1 - 0.062 13.4 0.1 0.13 12.3 0.1 1.5 1 0 0 1 1 1 0 HTH domain Haem_oxygenas_2 PF14518.6 CTQ28183.1 - 3e-36 124.9 0.0 4.5e-36 124.3 0.0 1.3 1 0 0 1 1 1 1 Iron-containing redox enzyme ExsD PF16806.5 CTQ28183.1 - 0.16 11.9 0.0 2.1 8.2 0.0 2.1 2 0 0 2 2 2 0 Antiactivator protein ExsD Phytoreo_Pns PF05451.11 CTQ28183.1 - 0.21 10.7 0.0 0.29 10.2 0.0 1.2 1 0 0 1 1 1 0 Phytoreovirus nonstructural protein Pns10/11 EamA PF00892.20 CTQ28184.1 - 3.7e-36 124.3 30.6 3.5e-19 69.3 12.6 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 CTQ28184.1 - 0.001 18.5 4.3 0.59 9.4 0.2 3.0 2 1 0 3 3 3 2 Triose-phosphate Transporter family UAA PF08449.11 CTQ28184.1 - 0.42 9.8 4.4 9.3 5.3 1.5 2.5 2 0 0 2 2 2 0 UAA transporter family MFS_1 PF07690.16 CTQ28185.1 - 1e-44 152.9 63.5 2.4e-37 128.7 38.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28185.1 - 1.7e-34 119.5 24.3 4.9e-25 88.3 7.0 2.1 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 CTQ28185.1 - 2.1e-07 30.2 17.6 0.00017 20.6 0.8 3.1 1 1 0 2 2 2 2 MFS_1 like family MFS_5 PF05631.14 CTQ28185.1 - 0.00054 19.0 3.2 0.0045 15.9 0.5 2.3 2 1 0 2 2 2 2 Sugar-tranasporters, 12 TM BT1 PF03092.16 CTQ28185.1 - 0.15 10.2 6.7 0.17 10.1 0.4 2.2 1 1 1 2 2 2 0 BT1 family NAD_binding_9 PF13454.6 CTQ28186.1 - 1.6e-28 99.6 0.0 2.9e-28 98.8 0.0 1.4 1 0 0 1 1 1 1 FAD-NAD(P)-binding DAO PF01266.24 CTQ28186.1 - 0.00021 21.0 0.8 0.0022 17.6 0.0 2.5 1 1 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CTQ28186.1 - 0.013 15.7 0.0 0.033 14.4 0.0 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 CTQ28186.1 - 0.27 10.4 0.4 1.4 8.1 0.0 2.0 2 0 0 2 2 2 0 Thi4 family Oxidored_FMN PF00724.20 CTQ28187.1 - 4.8e-64 216.8 0.0 5.5e-64 216.6 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Dus PF01207.17 CTQ28187.1 - 2e-06 27.1 0.0 2.8e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.12 CTQ28187.1 - 0.00028 20.3 0.0 0.00041 19.8 0.0 1.2 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator MR_MLE_C PF13378.6 CTQ28187.1 - 0.064 12.8 0.0 0.96 9.0 0.0 2.2 2 0 0 2 2 2 0 Enolase C-terminal domain-like DivIVA PF05103.13 CTQ28188.1 - 0.0039 17.3 33.6 0.13 12.4 10.5 2.6 1 1 2 3 3 3 3 DivIVA protein YtxH PF12732.7 CTQ28188.1 - 0.0048 17.4 34.2 0.023 15.2 8.7 3.1 1 1 2 3 3 3 2 YtxH-like protein Apolipoprotein PF01442.18 CTQ28188.1 - 0.005 16.7 20.3 0.047 13.6 20.4 2.0 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain Cor1 PF04803.12 CTQ28188.1 - 0.036 14.3 8.7 0.047 13.9 8.7 1.2 1 0 0 1 1 1 0 Cor1/Xlr/Xmr conserved region V-ATPase_G_2 PF16999.5 CTQ28188.1 - 0.067 13.6 35.3 0.053 13.9 24.7 2.3 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF883 PF05957.13 CTQ28188.1 - 0.089 13.4 24.0 2 9.1 2.5 3.1 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) PA26 PF04636.13 CTQ28188.1 - 0.38 9.6 6.6 0.45 9.4 6.6 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) Calc_CGRP_IAPP PF00214.19 CTQ28188.1 - 0.56 10.6 6.5 1.7 9.0 6.5 1.9 1 1 0 1 1 1 0 Calcitonin / CGRP / IAPP family Prominin PF05478.11 CTQ28188.1 - 1.3 6.9 5.5 1.6 6.6 5.5 1.2 1 0 0 1 1 1 0 Prominin Phasin PF05597.11 CTQ28188.1 - 1.4 8.9 17.7 2.7 8.0 3.7 2.7 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF3584 PF12128.8 CTQ28188.1 - 2.3 5.6 23.9 3 5.2 23.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF4239 PF14023.6 CTQ28188.1 - 2.5 7.8 4.7 3.9 7.1 4.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DASH_Spc19 PF08287.11 CTQ28188.1 - 2.9 7.8 14.6 1.3 8.9 12.1 1.7 1 1 0 1 1 1 0 Spc19 YlqD PF11068.8 CTQ28188.1 - 3.8 7.9 18.3 3.3 8.1 4.3 2.1 1 1 1 2 2 2 0 YlqD protein Golgin_A5 PF09787.9 CTQ28188.1 - 4.4 6.7 17.8 5.7 6.3 17.8 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 SAPS PF04499.15 CTQ28188.1 - 4.5 5.9 10.2 5.3 5.7 10.2 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein vATP-synt_E PF01991.18 CTQ28188.1 - 7.3 5.9 30.7 9.2 5.6 12.8 2.5 1 1 1 2 2 2 0 ATP synthase (E/31 kDa) subunit LysR_substrate PF03466.20 CTQ28189.1 - 2.5e-36 125.0 3.1 3.4e-36 124.6 3.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28189.1 - 1.2e-19 70.0 0.1 6.2e-19 67.7 0.2 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ28189.1 - 0.0015 18.3 0.2 0.0029 17.4 0.2 1.4 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_29 PF13551.6 CTQ28189.1 - 0.041 13.9 0.0 0.11 12.5 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn helix HTH_28 PF13518.6 CTQ28189.1 - 0.096 12.8 0.1 0.2 11.8 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.22 CTQ28189.1 - 0.13 12.2 0.0 0.35 10.8 0.0 1.7 1 0 0 1 1 1 0 MarR family NMO PF03060.15 CTQ28190.1 - 7e-54 183.4 7.4 8.7e-53 179.8 7.4 1.9 1 1 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 CTQ28190.1 - 7.6e-06 25.2 2.3 1.3e-05 24.4 2.0 1.4 1 1 0 1 1 1 1 FMN-dependent dehydrogenase His_biosynth PF00977.21 CTQ28190.1 - 0.00032 20.2 0.1 0.00067 19.2 0.1 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.25 CTQ28190.1 - 0.0008 18.5 7.1 0.0063 15.6 1.4 3.1 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain TMP-TENI PF02581.17 CTQ28190.1 - 0.0012 18.2 0.6 0.004 16.5 0.3 1.9 2 0 0 2 2 2 1 Thiamine monophosphate synthase NanE PF04131.14 CTQ28190.1 - 0.048 12.8 0.1 0.15 11.3 0.1 1.8 1 1 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase Asparaginase_C PF17763.1 CTQ28190.1 - 0.089 13.0 0.6 0.31 11.3 0.0 2.1 2 1 0 2 2 2 0 Glutaminase/Asparaginase C-terminal domain Dus PF01207.17 CTQ28190.1 - 0.099 11.7 0.1 0.17 10.9 0.1 1.4 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) Peptidase_M20 PF01546.28 CTQ28191.1 - 4.1e-27 95.2 0.4 5.6e-27 94.8 0.4 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 CTQ28191.1 - 1.9e-08 34.3 0.0 3.1e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M28 M20_dimer PF07687.14 CTQ28191.1 - 4.8e-05 23.2 0.0 0.00018 21.4 0.0 1.8 2 0 0 2 2 2 1 Peptidase dimerisation domain Aminotran_5 PF00266.19 CTQ28192.1 - 4.3e-27 95.0 0.0 4.3e-26 91.8 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 CTQ28192.1 - 0.056 12.7 0.0 0.095 12.0 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family ABC_tran PF00005.27 CTQ28193.1 - 3.8e-36 124.6 0.0 5e-36 124.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28193.1 - 6.2e-12 45.9 0.5 8.8e-06 25.7 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28193.1 - 6e-10 38.9 0.1 1.2e-09 37.9 0.1 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ28193.1 - 3.2e-05 23.6 0.1 7e-05 22.5 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 CTQ28193.1 - 0.00031 21.0 0.5 0.0025 18.1 0.5 2.0 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 CTQ28193.1 - 0.00063 18.7 0.2 1.2 7.8 0.0 2.9 2 1 0 2 2 2 2 Predicted ATPase of the ABC class NB-ARC PF00931.22 CTQ28193.1 - 0.00094 18.4 0.1 0.0063 15.7 0.1 1.9 1 1 0 1 1 1 1 NB-ARC domain AAA_23 PF13476.6 CTQ28193.1 - 0.003 18.1 0.1 0.0075 16.8 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CTQ28193.1 - 0.0053 16.5 0.0 0.013 15.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ28193.1 - 0.0054 17.1 0.1 0.0093 16.4 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ28193.1 - 0.012 15.6 0.2 0.024 14.5 0.2 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_15 PF13175.6 CTQ28193.1 - 0.019 14.7 0.0 0.029 14.1 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 CTQ28193.1 - 0.041 14.0 0.1 0.073 13.1 0.1 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase ATPase PF06745.13 CTQ28193.1 - 0.05 12.9 0.1 0.36 10.1 0.0 2.0 2 0 0 2 2 2 0 KaiC AAA_25 PF13481.6 CTQ28193.1 - 0.082 12.5 0.1 0.96 9.0 0.0 2.2 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 CTQ28193.1 - 0.13 12.2 0.1 0.32 10.9 0.1 1.6 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 CTQ28193.1 - 0.14 12.2 0.1 20 5.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) BPD_transp_1 PF00528.22 CTQ28194.1 - 1.7e-14 53.9 8.7 1.7e-14 53.9 8.7 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ28195.1 - 2e-18 66.8 10.2 2.7e-18 66.4 10.2 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_3 PF00497.20 CTQ28196.1 - 7.2e-46 156.4 0.0 8.4e-46 156.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ28196.1 - 7.6e-05 22.9 0.0 0.0029 17.8 0.0 2.2 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 CTQ28196.1 - 0.0091 16.0 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 NMT1/THI5 like HTH_6 PF01418.17 CTQ28198.1 - 1.2e-12 47.6 0.0 2.2e-12 46.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 CTQ28198.1 - 2e-09 37.4 0.0 3e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 SIS domain HTH_Crp_2 PF13545.6 CTQ28198.1 - 3.2e-05 23.8 0.1 0.0015 18.5 0.0 3.3 3 1 0 3 3 3 1 Crp-like helix-turn-helix domain LacI PF00356.21 CTQ28198.1 - 0.00059 19.6 0.0 0.0015 18.3 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family MarR_2 PF12802.7 CTQ28198.1 - 0.007 16.2 0.1 0.04 13.8 0.0 2.4 2 0 0 2 2 2 1 MarR family HTH_IclR PF09339.10 CTQ28198.1 - 0.011 15.6 0.0 0.053 13.3 0.0 2.2 2 0 0 2 2 2 0 IclR helix-turn-helix domain MarR PF01047.22 CTQ28198.1 - 0.019 14.9 0.0 0.14 12.1 0.0 2.4 3 0 0 3 3 3 0 MarR family Crp PF00325.20 CTQ28198.1 - 0.024 14.3 0.3 0.073 12.7 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family HTH_3 PF01381.22 CTQ28198.1 - 0.034 14.2 0.1 0.084 13.0 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix Phage_min_cap2 PF06152.11 CTQ28198.1 - 0.037 12.9 0.1 0.052 12.5 0.1 1.2 1 0 0 1 1 1 0 Phage minor capsid protein 2 TP_methylase PF00590.20 CTQ28198.1 - 0.043 13.7 0.1 0.12 12.3 0.1 1.7 1 1 0 1 1 1 0 Tetrapyrrole (Corrin/Porphyrin) Methylases HHH_5 PF14520.6 CTQ28198.1 - 0.047 14.3 0.0 0.11 13.1 0.0 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix domain HTH_24 PF13412.6 CTQ28198.1 - 0.049 13.2 0.0 0.15 11.7 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Secretin_N PF03958.17 CTQ28198.1 - 0.066 13.6 0.4 0.47 10.9 0.0 2.7 2 2 0 2 2 2 0 Bacterial type II/III secretion system short domain HTH_36 PF13730.6 CTQ28198.1 - 0.08 12.9 0.0 0.23 11.4 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_26 PF13443.6 CTQ28198.1 - 0.15 12.5 0.1 0.53 10.8 0.0 1.9 2 0 0 2 2 1 0 Cro/C1-type HTH DNA-binding domain G_glu_transpept PF01019.21 CTQ28199.1 - 1.6e-127 426.4 0.0 1.8e-127 426.3 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase DUF4089 PF13318.6 CTQ28200.1 - 1.3e-17 64.0 0.5 1.4e-17 63.8 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4089) Amidase PF01425.21 CTQ28201.1 - 2.4e-101 340.0 0.0 3.4e-101 339.4 0.0 1.2 1 0 0 1 1 1 1 Amidase DUF3225 PF11533.8 CTQ28202.1 - 2.2e-60 201.9 0.2 2.5e-60 201.7 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3225) DUF4440 PF14534.6 CTQ28202.1 - 1e-06 29.1 0.6 1.3e-06 28.7 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.6 CTQ28202.1 - 8.8e-05 22.8 0.1 0.00011 22.4 0.1 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.7 CTQ28202.1 - 0.0057 17.3 0.7 0.0074 16.9 0.7 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_4 PF13577.6 CTQ28202.1 - 0.062 13.4 0.5 0.12 12.6 0.5 1.4 1 1 0 1 1 1 0 SnoaL-like domain Acetyltransf_1 PF00583.25 CTQ28203.1 - 6.4e-07 29.6 0.0 6.7e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ28203.1 - 1.4e-05 25.4 0.0 2.4e-05 24.7 0.0 1.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ28203.1 - 3.9e-05 23.6 0.1 5.3e-05 23.2 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ28203.1 - 0.096 12.8 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase FR47 PF08445.10 CTQ28203.1 - 0.13 12.3 0.4 3.3 7.7 0.1 2.6 1 1 2 3 3 3 0 FR47-like protein Semialdhyde_dhC PF02774.18 CTQ28204.1 - 6.8e-42 143.6 0.0 9e-42 143.2 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 CTQ28204.1 - 1.1e-23 84.0 0.0 4.6e-23 82.0 0.0 2.0 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain HxlR PF01638.17 CTQ28205.1 - 1.3e-21 76.2 0.0 2.1e-21 75.6 0.0 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 CTQ28205.1 - 0.0029 17.5 0.0 0.0055 16.6 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family MarR PF01047.22 CTQ28205.1 - 0.06 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 MarR family HlyD_D23 PF16576.5 CTQ28206.1 - 2e-21 76.2 5.8 9.1e-19 67.5 5.8 2.3 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 CTQ28206.1 - 5.3e-18 65.7 1.6 7.2e-14 52.4 0.0 2.8 2 1 1 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 CTQ28206.1 - 1.1e-13 50.7 3.3 1.1e-13 50.7 3.3 3.4 3 0 0 3 3 3 1 Biotin-lipoyl like HlyD PF00529.20 CTQ28206.1 - 5.1e-07 29.5 0.1 7.6e-07 28.9 0.1 1.2 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 CTQ28206.1 - 0.00047 19.9 0.0 0.019 14.8 0.1 2.5 2 0 0 2 2 2 1 Biotin-requiring enzyme YqfD PF06898.11 CTQ28206.1 - 0.098 11.5 0.1 0.15 10.9 0.1 1.4 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD ComP_DUS PF16732.5 CTQ28206.1 - 3.5 8.6 7.6 40 5.2 0.1 2.6 2 0 0 2 2 2 0 Type IV minor pilin ComP, DNA uptake sequence receptor Mobilization_B PF17511.2 CTQ28206.1 - 9.8 6.5 18.6 0.037 14.4 4.0 2.3 1 1 1 2 2 2 0 Mobilization protein B MFS_1 PF07690.16 CTQ28207.1 - 4.2e-38 131.2 45.6 4.2e-38 131.2 45.6 2.0 2 0 0 2 2 2 1 Major Facilitator Superfamily DNA_pol_A PF00476.20 CTQ28207.1 - 0.22 10.6 0.1 0.32 10.0 0.1 1.1 1 0 0 1 1 1 0 DNA polymerase family A ketoacyl-synt PF00109.26 CTQ28208.1 - 7.5e-61 205.9 2.5 1.3e-60 205.2 2.5 1.4 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 CTQ28208.1 - 5.2e-34 116.8 3.1 7.9e-34 116.2 1.7 2.0 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 CTQ28208.1 - 2.9e-05 23.6 1.6 5e-05 22.8 0.4 1.8 2 0 0 2 2 2 1 Thiolase, N-terminal domain PSI_PSAK PF01241.18 CTQ28208.1 - 0.028 14.4 3.1 0.046 13.7 0.2 2.8 2 1 1 3 3 3 0 Photosystem I psaG / psaK ACP_syn_III PF08545.10 CTQ28208.1 - 0.14 12.0 2.4 1.2 9.0 0.8 2.6 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DMT_YdcZ PF04657.13 CTQ28209.1 - 0.01 16.1 0.1 0.013 15.8 0.1 1.1 1 0 0 1 1 1 0 Putative inner membrane exporter, YdcZ DUF1422 PF07226.11 CTQ28209.1 - 0.096 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) ASCH PF04266.14 CTQ28211.1 - 6.3e-24 84.6 0.0 7.6e-24 84.3 0.0 1.1 1 0 0 1 1 1 1 ASCH domain DUF2691 PF10903.8 CTQ28212.1 - 0.15 11.9 0.1 0.57 10.0 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2691) HTH_18 PF12833.7 CTQ28213.1 - 2.9e-18 65.9 0.3 6.9e-18 64.7 0.1 1.7 1 1 1 2 2 2 1 Helix-turn-helix domain AraC_binding PF02311.19 CTQ28213.1 - 2.8e-10 40.2 0.3 5.5e-10 39.3 0.3 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_AraC PF00165.23 CTQ28213.1 - 1.1e-07 31.8 0.1 0.026 14.6 0.1 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ28213.1 - 0.0016 18.1 0.0 0.0028 17.3 0.0 1.3 1 0 0 1 1 1 1 Cupin domain Raf1_HTH PF18579.1 CTQ28213.1 - 0.1 12.3 0.0 2.2 8.0 0.0 2.3 2 0 0 2 2 2 0 Rubisco accumulation factor 1 helix turn helix domain GATase PF00117.28 CTQ28214.1 - 8e-15 55.1 0.0 1.1e-14 54.6 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 CTQ28214.1 - 0.0035 17.1 0.0 0.0053 16.5 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 CTQ28214.1 - 0.021 14.4 0.0 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Abhydrolase_1 PF00561.20 CTQ28216.1 - 1e-16 61.4 0.0 1.6e-09 37.8 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 CTQ28216.1 - 1.5e-12 48.6 0.0 2.5e-12 47.9 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 CTQ28216.1 - 3.9e-11 42.7 0.0 6.2e-11 42.0 0.0 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 CTQ28216.1 - 1.6e-06 28.4 0.0 2.3e-06 27.9 0.0 1.3 1 1 0 1 1 1 1 Thioesterase domain BAAT_C PF08840.11 CTQ28216.1 - 1.8e-06 28.1 0.0 2.5e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Ser_hydrolase PF06821.13 CTQ28216.1 - 2.2e-05 24.4 0.0 0.014 15.3 0.0 2.1 1 1 0 2 2 2 2 Serine hydrolase FSH1 PF03959.13 CTQ28216.1 - 5.1e-05 23.0 0.0 0.0002 21.1 0.0 1.8 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Ndr PF03096.14 CTQ28216.1 - 0.0003 19.6 0.0 0.00056 18.7 0.0 1.4 1 1 0 1 1 1 1 Ndr family UPF0227 PF05728.12 CTQ28216.1 - 0.00053 20.0 0.0 0.001 19.1 0.0 1.6 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0227) Palm_thioest PF02089.15 CTQ28216.1 - 0.00055 19.8 0.0 0.00069 19.5 0.0 1.3 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Abhydrolase_5 PF12695.7 CTQ28216.1 - 0.0025 17.6 0.0 0.013 15.3 0.0 1.9 2 0 0 2 2 2 1 Alpha/beta hydrolase family DLH PF01738.18 CTQ28216.1 - 0.0027 17.3 0.0 0.063 12.8 0.0 2.1 2 0 0 2 2 2 1 Dienelactone hydrolase family Esterase PF00756.20 CTQ28216.1 - 0.0029 17.3 0.0 0.0029 17.3 0.0 1.2 1 0 0 1 1 1 1 Putative esterase PGAP1 PF07819.13 CTQ28216.1 - 0.012 15.4 0.0 0.04 13.6 0.0 1.7 1 1 1 2 2 2 0 PGAP1-like protein Abhydrolase_3 PF07859.13 CTQ28216.1 - 0.033 14.0 0.0 0.12 12.2 0.0 1.8 1 1 0 1 1 1 0 alpha/beta hydrolase fold LIDHydrolase PF10230.9 CTQ28216.1 - 0.043 13.4 0.0 0.11 12.1 0.0 1.4 1 1 0 1 1 1 0 Lipid-droplet associated hydrolase DUF676 PF05057.14 CTQ28216.1 - 0.1 12.1 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Abhydrolase_2 PF02230.16 CTQ28216.1 - 0.12 12.1 0.0 0.34 10.7 0.0 1.7 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Esterase_phd PF10503.9 CTQ28216.1 - 0.13 11.7 0.0 1.1 8.7 0.0 2.0 1 1 0 2 2 2 0 Esterase PHB depolymerase DUF2048 PF09752.9 CTQ28216.1 - 0.18 10.9 0.0 1.9 7.5 0.0 2.0 2 0 0 2 2 2 0 Abhydrolase domain containing 18 HTH_18 PF12833.7 CTQ28218.1 - 3.4e-19 68.9 0.1 9.5e-19 67.5 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ28218.1 - 1.7e-09 37.5 0.4 0.00023 21.2 0.3 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 CTQ28218.1 - 3.9e-09 36.5 0.1 6.1e-09 35.9 0.1 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_2 PF07883.11 CTQ28218.1 - 0.0001 21.9 0.1 0.00018 21.2 0.1 1.4 1 0 0 1 1 1 1 Cupin domain TauE PF01925.19 CTQ28219.1 - 1.5e-33 116.4 39.4 1.9e-33 116.0 39.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF5353 PF17304.2 CTQ28219.1 - 4.3 7.1 12.3 0.51 10.1 1.2 3.2 3 0 0 3 3 3 0 Family of unknown function (DUF5353) Polysacc_deac_1 PF01522.21 CTQ28220.1 - 5.6e-10 39.2 0.2 2.4e-09 37.1 0.0 2.1 2 0 0 2 2 2 1 Polysaccharide deacetylase Asp_Glu_race PF01177.22 CTQ28221.1 - 6.9e-11 42.4 0.8 8.7e-11 42.1 0.8 1.1 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Amdase PF17645.1 CTQ28221.1 - 1.9e-05 24.4 0.5 1.9e-05 24.4 0.5 1.7 2 1 0 2 2 2 1 Arylmalonate decarboxylase PEP-utilizers PF00391.23 CTQ28221.1 - 0.11 12.3 1.2 0.2 11.4 0.1 2.0 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain FCD PF07729.12 CTQ28222.1 - 1.5e-16 60.9 3.7 1.5e-16 60.9 3.7 1.8 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 CTQ28222.1 - 2.9e-16 58.9 0.1 6.5e-16 57.7 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 CTQ28222.1 - 0.019 14.9 0.0 0.037 14.0 0.0 1.5 1 0 0 1 1 1 0 HTH domain TFIIE_alpha PF02002.17 CTQ28222.1 - 0.13 12.1 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit Fe_dep_repress PF01325.19 CTQ28222.1 - 0.17 12.1 0.1 1.7 8.9 0.0 2.2 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Transp_cyt_pur PF02133.15 CTQ28223.1 - 1.5e-84 284.3 34.2 1.8e-84 284.0 34.2 1.0 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin DUF2976 PF11190.8 CTQ28223.1 - 0.0043 16.8 7.5 0.13 12.1 0.0 4.3 3 2 2 5 5 5 2 Protein of unknown function (DUF2976) PRD1_DD PF11087.8 CTQ28223.1 - 0.088 12.5 4.7 0.43 10.3 1.3 2.9 2 0 0 2 2 2 0 PRD1 phage membrane DNA delivery Amidohydro_1 PF01979.20 CTQ28224.1 - 5.5e-68 229.8 0.0 6.3e-68 229.6 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 CTQ28224.1 - 2.9e-17 63.3 0.1 4.8e-10 39.5 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family Peripla_BP_1 PF00532.21 CTQ28224.1 - 0.11 11.9 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family GGDEF PF00990.21 CTQ28225.1 - 3.1e-36 124.6 0.0 4.7e-36 124.0 0.0 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_4 PF08448.10 CTQ28225.1 - 4.9e-09 36.4 0.0 3e-07 30.7 0.0 2.4 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 CTQ28225.1 - 3.4e-08 33.3 0.0 0.011 15.7 0.0 2.5 2 0 0 2 2 2 2 PAS domain PAS_9 PF13426.7 CTQ28225.1 - 2.4e-06 27.7 0.0 0.00024 21.3 0.0 2.5 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 CTQ28225.1 - 4.6e-05 23.4 0.0 0.054 13.5 0.0 3.2 3 0 0 3 3 3 1 PAS fold Peripla_BP_4 PF13407.6 CTQ28226.1 - 2e-20 73.5 0.0 2.7e-20 73.0 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 CTQ28226.1 - 1.7e-11 43.7 0.6 3.5e-11 42.7 0.6 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family ANF_receptor PF01094.28 CTQ28226.1 - 0.067 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Receptor family ligand binding region HTH_31 PF13560.6 CTQ28226.1 - 0.75 10.2 6.5 0.18 12.2 1.1 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain AP_endonuc_2 PF01261.24 CTQ28227.1 - 2.6e-34 118.5 0.1 4.3e-34 117.8 0.1 1.4 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel GFO_IDH_MocA PF01408.22 CTQ28228.1 - 9.3e-27 94.2 0.0 1.5e-26 93.5 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 CTQ28228.1 - 2.9e-10 40.2 0.0 5.8e-10 39.2 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain DUF4056 PF13265.6 CTQ28229.1 - 7.3e-130 432.1 0.0 9.1e-130 431.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4056) TENA_THI-4 PF03070.16 CTQ28231.1 - 4.7e-48 163.8 0.0 5.4e-48 163.6 0.0 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family ABC_tran PF00005.27 CTQ28232.1 - 2.2e-26 93.0 0.0 3.1e-26 92.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28232.1 - 1.1e-08 35.2 0.0 0.00019 21.3 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ28232.1 - 0.0001 22.7 0.7 0.00017 22.0 0.7 1.4 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 CTQ28232.1 - 0.00053 19.5 0.1 0.0048 16.3 0.0 1.9 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ28232.1 - 0.0015 18.5 0.0 0.0033 17.3 0.0 1.5 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 CTQ28232.1 - 0.064 13.0 0.0 0.15 11.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_33 PF13671.6 CTQ28232.1 - 0.085 13.0 0.0 0.15 12.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ28232.1 - 0.087 12.5 1.7 0.24 11.1 1.7 1.8 1 1 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 CTQ28233.1 - 4.9e-25 88.3 16.5 8.7e-25 87.5 16.5 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Shadoo PF14999.6 CTQ28233.1 - 0.41 10.8 2.2 0.74 9.9 2.2 1.4 1 0 0 1 1 1 0 Shadow of prion protein, neuroprotective NMT1 PF09084.11 CTQ28234.1 - 1.4e-65 221.3 0.1 1.7e-65 221.0 0.1 1.1 1 0 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.20 CTQ28234.1 - 5.6e-07 29.2 0.4 1.5e-06 27.8 0.3 1.6 1 1 1 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 NMT1_2 PF13379.6 CTQ28234.1 - 0.0039 16.9 0.1 0.036 13.8 0.1 2.1 1 1 0 1 1 1 1 NMT1-like family YhfZ_C PF14503.6 CTQ28234.1 - 0.0039 16.8 0.0 0.0054 16.3 0.0 1.1 1 0 0 1 1 1 1 YhfZ C-terminal domain LysR_substrate PF03466.20 CTQ28234.1 - 0.0073 15.7 1.3 0.097 12.0 0.4 3.2 2 1 0 2 2 2 1 LysR substrate binding domain Phosphonate-bd PF12974.7 CTQ28234.1 - 0.014 15.0 0.5 0.28 10.7 0.2 2.3 1 1 1 2 2 2 0 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1_3 PF16868.5 CTQ28234.1 - 0.023 14.1 0.0 0.032 13.6 0.0 1.2 1 0 0 1 1 1 0 NMT1-like family Aminotran_3 PF00202.21 CTQ28235.1 - 3.5e-101 338.8 0.0 4.2e-101 338.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 CTQ28235.1 - 0.0042 16.3 0.0 0.026 13.7 0.0 1.9 2 0 0 2 2 2 1 Aminotransferase class I and II Pyridoxal_deC PF00282.19 CTQ28236.1 - 8.6e-65 218.9 0.1 1.1e-64 218.5 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 CTQ28236.1 - 2.4e-10 40.2 0.7 6.6e-10 38.7 0.7 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase SepSecS PF05889.13 CTQ28236.1 - 2.7e-06 26.3 0.0 1.2e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_5 PF00266.19 CTQ28236.1 - 0.00028 20.0 0.5 0.0019 17.2 0.5 2.3 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 CTQ28236.1 - 0.0074 15.5 0.0 0.056 12.6 0.0 2.1 2 0 0 2 2 2 1 Aminotransferase class I and II LysR_substrate PF03466.20 CTQ28237.1 - 1.7e-22 79.8 4.3 2.4e-22 79.3 4.3 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28237.1 - 2.1e-16 59.6 1.0 4.9e-16 58.4 1.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family SKA2 PF16740.5 CTQ28237.1 - 0.058 13.2 0.1 0.095 12.5 0.1 1.3 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 DsbD PF02683.15 CTQ28238.1 - 3.2e-13 50.1 15.4 2.4e-12 47.2 15.4 2.0 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region AhpC-TSA PF00578.21 CTQ28238.1 - 4.8e-11 42.6 0.0 7.3e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 CTQ28238.1 - 1.2e-09 38.0 0.0 1.8e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 CTQ28238.1 - 7.1e-06 26.3 0.0 1.1e-05 25.6 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 CTQ28238.1 - 0.0085 16.1 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 CTQ28238.1 - 0.084 13.3 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain DUF2975 PF11188.8 CTQ28238.1 - 0.22 11.4 3.2 0.33 10.8 0.4 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) HATPase_c PF02518.26 CTQ28239.1 - 1.8e-20 73.5 0.0 3e-20 72.8 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ28239.1 - 1.9e-05 24.6 0.6 6.1e-05 23.0 0.6 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 CTQ28239.1 - 6e-05 23.4 0.2 0.00032 21.0 0.2 2.4 1 0 0 1 1 1 1 HAMP domain HATPase_c_3 PF13589.6 CTQ28239.1 - 0.00065 19.5 0.0 0.001 18.9 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 CTQ28239.1 - 0.025 14.5 0.5 0.16 11.9 0.0 2.2 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain TetR_C_31 PF17940.1 CTQ28239.1 - 1.9 8.8 10.3 0.14 12.3 2.9 3.1 2 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Response_reg PF00072.24 CTQ28240.1 - 1.6e-32 112.0 0.2 2.5e-32 111.4 0.2 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ28240.1 - 1.5e-19 69.9 0.3 2.7e-19 69.0 0.3 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Abhydrolase_1 PF00561.20 CTQ28241.1 - 3.8e-18 66.1 0.1 6.2e-18 65.4 0.1 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 CTQ28241.1 - 7.1e-11 43.1 5.0 9.2e-11 42.8 5.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 CTQ28241.1 - 5.3e-05 22.6 0.0 7.7e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 CTQ28241.1 - 0.046 13.4 0.2 0.076 12.7 0.2 1.3 1 0 0 1 1 1 0 Putative esterase CHASE2 PF05226.11 CTQ28241.1 - 0.067 12.9 0.2 0.42 10.3 0.1 2.0 2 0 0 2 2 2 0 CHASE2 domain Abhydrolase_5 PF12695.7 CTQ28241.1 - 0.1 12.4 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family Peptidase_M19 PF01244.21 CTQ28242.1 - 8.8e-94 314.2 0.0 9.9e-94 314.1 0.0 1.0 1 0 0 1 1 1 1 Membrane dipeptidase (Peptidase family M19) Amidohydro_2 PF04909.14 CTQ28242.1 - 0.00042 20.2 0.0 0.0012 18.7 0.0 1.6 1 1 0 1 1 1 1 Amidohydrolase Lactamase_B_2 PF12706.7 CTQ28243.1 - 1.3e-44 152.2 0.1 1.5e-44 151.9 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain TENA_THI-4 PF03070.16 CTQ28244.1 - 7.6e-69 231.7 0.2 8.7e-69 231.5 0.2 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Ecotin PF03974.13 CTQ28244.1 - 0.08 12.9 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Ecotin PqqD PF05402.12 CTQ28245.1 - 1.6e-14 53.9 0.1 2e-14 53.6 0.1 1.1 1 0 0 1 1 1 1 Coenzyme PQQ synthesis protein D (PqqD) Flu_M1_C PF08289.11 CTQ28245.1 - 0.12 12.6 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Influenza Matrix protein (M1) C-terminal domain Lant_dehydr_N PF04738.13 CTQ28245.1 - 0.12 10.4 0.0 0.13 10.3 0.0 1.0 1 0 0 1 1 1 0 Lantibiotic dehydratase, N terminus DUF4863 PF16155.5 CTQ28245.1 - 0.15 11.9 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4863) Radical_SAM PF04055.21 CTQ28246.1 - 1e-22 81.3 0.0 1.5e-22 80.8 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 CTQ28246.1 - 1.3e-06 28.8 0.0 2.9e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 CTQ28246.1 - 4.5e-06 27.0 0.0 7.6e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 CTQ28246.1 - 8.2e-06 25.9 0.5 1.6e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain Peptidase_M16 PF00675.20 CTQ28247.1 - 9.6e-37 126.2 0.0 2.2e-36 125.1 0.0 1.6 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 CTQ28247.1 - 5.1e-05 23.4 0.0 0.0029 17.6 0.0 3.0 2 1 0 2 2 2 1 Peptidase M16 inactive domain DUF5543 PF17697.1 CTQ28247.1 - 0.047 14.0 0.1 6.6 7.0 0.0 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5543) GATase PF00117.28 CTQ28248.1 - 3.8e-18 65.9 0.0 8.4e-18 64.8 0.0 1.5 2 0 0 2 2 2 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 CTQ28248.1 - 3.9e-08 33.3 0.4 1.9e-07 31.1 0.4 1.8 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 CTQ28248.1 - 0.034 13.8 0.0 0.046 13.3 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Transpeptidase PF00905.22 CTQ28249.1 - 1.3e-78 264.3 0.1 1.7e-78 263.9 0.1 1.1 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 CTQ28249.1 - 6.2e-45 153.7 0.0 1.3e-44 152.7 0.0 1.5 1 0 0 1 1 1 1 Penicillin-binding Protein dimerisation domain DMT_YdcZ PF04657.13 CTQ28250.1 - 6.1e-34 117.3 21.0 7e-34 117.1 21.0 1.0 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ DMT_YdcZ PF04657.13 CTQ28251.1 - 2.4e-31 108.9 15.8 2.7e-31 108.7 15.8 1.0 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ LysR_substrate PF03466.20 CTQ28252.1 - 2.8e-35 121.6 0.2 4.7e-35 120.8 0.2 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28252.1 - 1e-17 63.8 0.1 1.9e-17 63.0 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_38 PF13936.6 CTQ28252.1 - 0.075 12.8 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 CTQ28252.1 - 0.084 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding peroxidase PF00141.23 CTQ28253.1 - 3.7e-83 278.7 0.0 8.7e-46 156.4 0.0 2.2 2 0 0 2 2 2 2 Peroxidase AFG1_ATPase PF03969.16 CTQ28254.1 - 1.9e-86 290.3 0.1 2.3e-86 290.0 0.1 1.1 1 0 0 1 1 1 1 AFG1-like ATPase AAA_16 PF13191.6 CTQ28254.1 - 1.2e-05 25.8 0.4 0.018 15.4 0.0 2.7 1 1 0 2 2 2 2 AAA ATPase domain TniB PF05621.11 CTQ28254.1 - 8.7e-05 22.0 0.0 0.11 11.9 0.0 3.1 2 1 1 3 3 3 1 Bacterial TniB protein AAA_22 PF13401.6 CTQ28254.1 - 0.06 13.6 0.0 0.32 11.3 0.0 2.2 2 1 0 2 2 2 0 AAA domain MgtC PF02308.16 CTQ28255.1 - 1.7e-38 131.7 10.7 3e-38 130.9 10.7 1.4 1 0 0 1 1 1 1 MgtC family Sugar_tr PF00083.24 CTQ28257.1 - 6.9e-33 114.2 32.1 8.3e-33 113.9 32.1 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 CTQ28257.1 - 6.3e-29 101.0 49.6 5.5e-21 74.9 27.5 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ28257.1 - 1.6 8.0 31.6 0.011 15.0 10.1 2.1 1 1 1 2 2 2 0 Uncharacterised MFS-type transporter YbfB UNC-93 PF05978.16 CTQ28257.1 - 8.4 6.1 21.7 1.1 9.0 9.6 2.5 2 0 0 2 2 2 0 Ion channel regulatory protein UNC-93 PTS_IIA PF02255.16 CTQ28258.1 - 5.8e-31 106.4 2.4 6.6e-31 106.2 2.4 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIA subunit PTS_IIB PF02302.17 CTQ28259.1 - 7.4e-22 77.9 1.2 8.4e-22 77.7 1.2 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit Abhydrolase_3 PF07859.13 CTQ28260.1 - 2.1e-18 67.0 0.1 2.8e-18 66.5 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 CTQ28260.1 - 6.1e-14 52.0 0.7 2.1e-07 30.6 0.0 2.5 3 0 0 3 3 3 2 Prolyl oligopeptidase family COesterase PF00135.28 CTQ28260.1 - 1.1e-09 37.7 0.1 6.7e-09 35.2 0.1 1.9 1 1 0 1 1 1 1 Carboxylesterase family Hydrolase_4 PF12146.8 CTQ28260.1 - 2.6e-06 26.9 0.0 0.051 12.8 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 CTQ28260.1 - 0.001 18.7 0.2 0.023 14.2 0.0 2.6 1 1 1 2 2 2 1 Dienelactone hydrolase family Abhydrolase_4 PF08386.10 CTQ28260.1 - 0.0035 17.4 0.0 0.0082 16.2 0.0 1.6 1 0 0 1 1 1 1 TAP-like protein Esterase_phd PF10503.9 CTQ28260.1 - 0.0099 15.4 0.3 0.75 9.2 0.1 2.7 2 1 0 2 2 2 1 Esterase PHB depolymerase Abhydrolase_1 PF00561.20 CTQ28260.1 - 0.03 14.0 0.1 1.1 8.8 0.0 2.2 1 1 1 2 2 2 0 alpha/beta hydrolase fold FSH1 PF03959.13 CTQ28260.1 - 0.11 12.2 0.1 0.32 10.6 0.1 1.7 1 1 0 1 1 1 0 Serine hydrolase (FSH1) LamB PF02264.15 CTQ28261.1 - 2.6e-18 67.1 3.5 3.8e-18 66.5 3.5 1.2 1 0 0 1 1 1 1 LamB porin HTH_18 PF12833.7 CTQ28262.1 - 2.8e-12 46.7 0.0 6.8e-12 45.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 CTQ28262.1 - 1e-06 28.7 0.2 1.9e-06 27.8 0.2 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_AraC PF00165.23 CTQ28262.1 - 2e-06 27.7 0.2 5.7e-06 26.3 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 CTQ28262.1 - 3.5e-06 26.6 0.0 6.5e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Cupin domain Nmad5 PF18757.1 CTQ28262.1 - 0.0031 17.8 0.5 0.017 15.3 0.1 2.0 2 0 0 2 2 2 1 Nucleotide modification associated domain 5 Bac_rhamnosid6H PF17389.2 CTQ28263.1 - 1.8e-42 145.8 0.0 2.5e-42 145.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Bac_rhamnosid_N PF08531.10 CTQ28263.1 - 6.3e-29 101.0 0.0 1.1e-28 100.2 0.0 1.3 1 0 0 1 1 1 1 Alpha-L-rhamnosidase N-terminal domain Bac_rhamnosid PF05592.11 CTQ28263.1 - 7.8e-12 45.1 0.0 1.7e-11 44.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase concanavalin-like domain Bac_rhamnosid_C PF17390.2 CTQ28263.1 - 2.7e-09 36.7 0.1 9e-09 35.0 0.0 1.9 2 0 0 2 2 2 1 Bacterial alpha-L-rhamnosidase C-terminal domain PTS_EIIC PF02378.18 CTQ28264.1 - 5.1e-39 134.2 41.5 5.1e-39 134.2 41.5 1.4 1 1 0 1 1 1 1 Phosphotransferase system, EIIC DAD PF02109.16 CTQ28264.1 - 0.055 13.8 1.3 0.26 11.6 1.3 2.2 1 0 0 1 1 1 0 DAD family LysR_substrate PF03466.20 CTQ28265.1 - 3.7e-27 95.1 0.0 5.5e-27 94.5 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28265.1 - 5.3e-16 58.3 0.1 8.5e-16 57.7 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ28265.1 - 0.0069 16.2 0.1 0.014 15.1 0.1 1.4 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_20 PF12840.7 CTQ28265.1 - 0.081 13.0 0.1 0.22 11.6 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 CTQ28265.1 - 0.091 12.7 0.0 0.26 11.2 0.0 1.7 1 0 0 1 1 1 0 MarR family Molybdopterin PF00384.22 CTQ28266.1 - 4.2e-22 78.7 0.0 6.4e-22 78.1 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ28266.1 - 2.2e-16 59.8 0.0 4e-16 59.0 0.0 1.4 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain PcrB PF01884.17 CTQ28266.1 - 0.028 13.9 0.0 0.14 11.6 0.0 2.0 1 1 0 1 1 1 0 PcrB family Bestrophin PF01062.21 CTQ28268.1 - 4.2e-62 210.2 1.1 4.7e-62 210.0 1.1 1.0 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Cation_efflux PF01545.21 CTQ28269.1 - 2.4e-43 148.2 10.6 2.9e-43 147.9 10.6 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 CTQ28269.1 - 3.3e-23 81.6 0.7 5.5e-23 80.9 0.7 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter SseC PF04888.12 CTQ28269.1 - 0.11 12.1 7.7 0.044 13.4 1.1 2.1 1 1 0 2 2 2 0 Secretion system effector C (SseC) like family SBP_bac_3 PF00497.20 CTQ28271.1 - 1.9e-21 76.5 0.0 2.1e-21 76.4 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Ribosomal_L12_N PF16320.5 CTQ28271.1 - 0.11 12.2 0.1 0.18 11.5 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain DUF2236 PF09995.9 CTQ28272.1 - 1.7e-55 188.7 7.6 2e-55 188.5 7.6 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2236) OsmC PF02566.19 CTQ28273.1 - 1.7e-19 70.1 0.1 2.2e-19 69.8 0.1 1.1 1 0 0 1 1 1 1 OsmC-like protein BOF PF04076.13 CTQ28276.1 - 4.8e-32 110.1 0.0 5.8e-32 109.8 0.0 1.1 1 0 0 1 1 1 1 Bacterial OB fold (BOF) protein Dr_adhesin PF12393.8 CTQ28276.1 - 0.036 14.3 1.7 0.077 13.3 1.7 1.6 1 0 0 1 1 1 0 Dr family adhesin tRNA_anti-codon PF01336.25 CTQ28276.1 - 0.077 13.0 0.0 0.27 11.2 0.0 1.9 1 1 0 1 1 1 0 OB-fold nucleic acid binding domain DUF1214 PF06742.11 CTQ28277.1 - 0.039 14.4 0.0 0.06 13.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1214) DUF5305 PF17231.2 CTQ28277.1 - 0.12 11.8 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF421 PF04239.12 CTQ28278.1 - 2.6e-15 56.1 0.1 3.8e-15 55.6 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF421) VP7 PF00434.18 CTQ28278.1 - 0.17 11.0 5.4 0.28 10.3 5.2 1.4 1 1 0 1 1 1 0 Glycoprotein VP7 adh_short PF00106.25 CTQ28279.1 - 3.6e-40 137.5 1.1 4.9e-40 137.1 1.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ28279.1 - 2.7e-25 89.3 1.3 3.7e-25 88.8 1.3 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ28279.1 - 3.2e-12 46.7 1.3 4.5e-12 46.3 1.3 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 CTQ28279.1 - 0.0098 15.8 0.8 0.015 15.2 0.8 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NmrA PF05368.13 CTQ28279.1 - 0.12 11.9 0.7 0.21 11.1 0.7 1.3 1 0 0 1 1 1 0 NmrA-like family GIDA PF01134.22 CTQ28279.1 - 0.25 10.4 1.3 0.38 9.8 1.3 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A Alpha-amylase PF00128.24 CTQ28280.1 - 2.4e-61 208.2 0.0 9e-61 206.3 0.0 1.7 1 1 0 1 1 1 1 Alpha amylase, catalytic domain Malt_amylase_C PF16657.5 CTQ28280.1 - 0.0034 17.5 0.0 0.007 16.5 0.0 1.6 1 0 0 1 1 1 1 Maltogenic Amylase, C-terminal domain hDGE_amylase PF14701.6 CTQ28280.1 - 0.013 14.6 0.0 0.02 14.0 0.0 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme, glucanotransferase domain GAF_3 PF13492.6 CTQ28281.1 - 0.055 13.8 0.1 0.11 12.8 0.1 1.5 1 1 1 2 2 2 0 GAF domain CinA_KH PF18146.1 CTQ28281.1 - 0.06 13.5 0.2 0.084 13.0 0.2 1.2 1 0 0 1 1 1 0 Damage-inducible protein CinA KH domain DUF892 PF05974.12 CTQ28282.1 - 4.2e-42 143.9 0.9 4.6e-42 143.7 0.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) DUF4281 PF14108.6 CTQ28282.1 - 0.011 16.1 0.1 0.017 15.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4281) Ferritin PF00210.24 CTQ28282.1 - 0.055 13.4 0.8 1.1 9.1 0.8 2.1 1 1 0 1 1 1 0 Ferritin-like domain PPR_3 PF13812.6 CTQ28282.1 - 0.12 12.4 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Pentatricopeptide repeat domain Vir_act_alpha_C PF10400.9 CTQ28282.1 - 0.16 12.7 6.0 0.44 11.2 3.7 2.4 2 1 0 2 2 2 0 Virulence activator alpha C-term KGG PF10685.9 CTQ28284.1 - 3.3e-19 68.5 16.3 3.7e-10 39.7 5.2 2.9 3 0 0 3 3 3 2 Stress-induced bacterial acidophilic repeat motif adh_short_C2 PF13561.6 CTQ28285.1 - 3.5e-58 196.9 0.0 4.4e-58 196.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ28285.1 - 2.6e-47 160.8 0.0 3.3e-47 160.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ28285.1 - 7.4e-10 39.0 0.0 1e-09 38.6 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF2543 PF10820.8 CTQ28286.1 - 1.2e-47 160.0 5.1 1.3e-47 159.8 5.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2543) Mannitol_dh_C PF08125.13 CTQ28286.1 - 0.016 14.7 0.3 0.017 14.6 0.3 1.1 1 0 0 1 1 1 0 Mannitol dehydrogenase C-terminal domain LysR_substrate PF03466.20 CTQ28287.1 - 1.9e-40 138.5 3.1 2.7e-40 138.0 3.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28287.1 - 3e-17 62.3 0.3 5.8e-17 61.4 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_29 PF13551.6 CTQ28287.1 - 0.00026 21.0 2.9 0.00053 20.0 0.3 2.2 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 CTQ28287.1 - 0.00059 19.9 2.1 0.016 15.3 0.4 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ28287.1 - 0.0018 18.0 0.6 0.059 13.2 0.1 2.5 2 0 0 2 2 2 1 Homeodomain-like domain HTH_IclR PF09339.10 CTQ28287.1 - 0.0038 17.0 0.1 0.029 14.2 0.1 2.4 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 CTQ28287.1 - 0.02 14.8 0.6 0.67 9.9 0.1 2.6 2 0 0 2 2 2 0 MarR family HTH_8 PF02954.19 CTQ28287.1 - 0.033 14.0 1.4 0.068 13.0 0.1 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family HTH_Crp_2 PF13545.6 CTQ28287.1 - 0.056 13.4 0.3 1.2 9.2 0.2 2.8 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain HTH_24 PF13412.6 CTQ28287.1 - 0.17 11.4 0.2 0.41 10.2 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Lactamase_B PF00753.27 CTQ28288.1 - 7.9e-08 32.5 0.0 7.8e-07 29.3 0.0 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Ribosomal_S22 PF08136.11 CTQ28289.1 - 7.3e-33 112.7 2.0 7.6e-33 112.6 2.0 1.0 1 0 0 1 1 1 1 30S ribosomal protein subunit S22 family Malic_M PF03949.15 CTQ28290.1 - 6e-107 356.7 0.2 8.2e-107 356.3 0.2 1.2 1 0 0 1 1 1 1 Malic enzyme, NAD binding domain malic PF00390.19 CTQ28290.1 - 1.6e-78 262.7 0.0 3e-78 261.8 0.0 1.5 1 0 0 1 1 1 1 Malic enzyme, N-terminal domain ABC_tran PF00005.27 CTQ28292.1 - 3.5e-42 144.2 0.0 3.8e-25 89.0 0.0 3.8 3 1 0 3 3 3 2 ABC transporter AAA_21 PF13304.6 CTQ28292.1 - 2.4e-13 50.6 12.9 0.0044 16.9 0.7 4.2 3 1 0 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28292.1 - 2.2e-09 37.1 0.4 0.24 10.8 0.0 4.4 4 0 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ28292.1 - 8.9e-07 29.4 7.8 0.00028 21.3 0.2 3.6 3 1 0 3 3 3 2 AAA ATPase domain MMR_HSR1 PF01926.23 CTQ28292.1 - 1.3e-06 28.4 0.0 0.051 13.7 0.0 3.5 3 1 0 3 3 3 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 CTQ28292.1 - 3.3e-06 27.1 0.1 0.019 14.9 0.0 2.7 3 0 0 3 3 3 2 RsgA GTPase AAA_29 PF13555.6 CTQ28292.1 - 2e-05 24.2 3.8 0.034 13.9 0.2 3.0 3 0 0 3 3 3 2 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ28292.1 - 3.1e-05 23.9 0.0 0.026 14.2 0.1 2.5 2 0 0 2 2 2 2 AAA ATPase domain NACHT PF05729.12 CTQ28292.1 - 0.00021 21.2 0.4 0.14 12.1 0.2 2.6 2 0 0 2 2 2 2 NACHT domain AAA_22 PF13401.6 CTQ28292.1 - 0.00025 21.3 0.1 0.23 11.7 0.1 2.9 2 1 0 2 2 2 1 AAA domain AAA_23 PF13476.6 CTQ28292.1 - 0.00028 21.4 3.5 0.2 12.1 0.3 3.1 3 0 0 3 3 3 2 AAA domain SbcCD_C PF13558.6 CTQ28292.1 - 0.0011 19.1 1.8 0.69 10.2 0.3 3.7 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit ABC_tran_Xtn PF12848.7 CTQ28292.1 - 0.0021 18.0 1.6 0.0048 16.9 1.6 1.5 1 0 0 1 1 1 1 ABC transporter ATP-synt_ab PF00006.25 CTQ28292.1 - 0.0022 17.7 0.0 0.38 10.4 0.0 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_28 PF13521.6 CTQ28292.1 - 0.0046 17.2 0.0 4.7 7.4 0.0 3.0 3 0 0 3 3 3 1 AAA domain RNA_helicase PF00910.22 CTQ28292.1 - 0.0091 16.4 0.0 5.4 7.4 0.0 2.6 2 0 0 2 2 2 1 RNA helicase DUF2813 PF11398.8 CTQ28292.1 - 0.011 15.0 1.1 2.1 7.5 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2813) PduV-EutP PF10662.9 CTQ28292.1 - 0.023 14.4 0.2 0.6 9.8 0.1 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_25 PF13481.6 CTQ28292.1 - 0.048 13.2 0.9 3.1 7.3 0.1 3.0 3 0 0 3 3 3 0 AAA domain DUF815 PF05673.13 CTQ28292.1 - 0.049 12.8 0.9 2.3 7.3 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) KAP_NTPase PF07693.14 CTQ28292.1 - 0.052 12.8 0.0 4.5 6.4 0.0 2.4 2 1 0 2 2 2 0 KAP family P-loop domain Zeta_toxin PF06414.12 CTQ28292.1 - 0.054 12.8 2.2 8.7 5.6 0.1 3.1 3 0 0 3 3 3 0 Zeta toxin DUF87 PF01935.17 CTQ28292.1 - 0.067 13.3 0.0 1.4 8.9 0.0 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_18 PF13238.6 CTQ28292.1 - 0.087 13.4 0.0 11 6.6 0.1 2.7 2 0 0 2 2 2 0 AAA domain MeaB PF03308.16 CTQ28292.1 - 0.14 11.1 0.3 0.82 8.6 0.1 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Mg_chelatase PF01078.21 CTQ28292.1 - 0.14 11.5 0.4 4.5 6.6 0.1 2.6 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI Acetyltransf_1 PF00583.25 CTQ28293.1 - 5.4e-13 49.2 0.1 9e-13 48.5 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ28293.1 - 1.1e-11 44.7 0.0 2.9e-11 43.4 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain MarR_2 PF12802.7 CTQ28293.1 - 3.4e-11 42.9 1.9 1e-10 41.3 0.4 2.3 2 0 0 2 2 2 1 MarR family Acetyltransf_7 PF13508.7 CTQ28293.1 - 7.8e-11 42.3 0.0 2.1e-10 40.9 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain HTH_27 PF13463.6 CTQ28293.1 - 9.6e-09 35.6 0.1 2.2e-08 34.5 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 CTQ28293.1 - 1.3e-07 31.4 0.0 2.6e-07 30.4 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 CTQ28293.1 - 0.00021 21.0 4.2 0.00067 19.4 0.7 2.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain Acetyltransf_4 PF13420.7 CTQ28293.1 - 0.0053 16.9 0.0 0.009 16.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ28293.1 - 0.0077 16.2 0.0 0.03 14.3 0.0 2.0 1 0 0 1 1 1 1 FR47-like protein TrmB PF01978.19 CTQ28293.1 - 0.015 15.2 0.1 0.029 14.3 0.1 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Acetyltransf_9 PF13527.7 CTQ28293.1 - 0.027 14.6 0.0 1.4 9.0 0.0 2.8 2 1 0 2 2 2 0 Acetyltransferase (GNAT) domain Fe_dep_repress PF01325.19 CTQ28293.1 - 0.04 14.1 0.2 0.085 13.1 0.2 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_5 PF01022.20 CTQ28293.1 - 0.056 13.3 0.2 0.17 11.8 0.1 1.8 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family KORA PF16509.5 CTQ28293.1 - 0.083 13.2 0.0 0.53 10.6 0.0 2.3 2 0 0 2 2 2 0 TrfB plasmid transcriptional repressor Acetyltransf_CG PF14542.6 CTQ28293.1 - 0.11 12.7 0.0 1.1 9.4 0.0 2.4 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase Pyrophosphatase PF00719.19 CTQ28294.1 - 1.4e-45 154.9 0.0 1.7e-45 154.7 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase ADH_N PF08240.12 CTQ28295.1 - 1.3e-29 102.2 7.0 1.3e-29 102.2 7.0 1.8 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 CTQ28295.1 - 1.9e-25 89.3 2.1 3.5e-25 88.5 2.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 CTQ28295.1 - 3.6e-10 41.0 0.8 5.7e-10 40.4 0.8 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase CoA_binding PF02629.19 CTQ28295.1 - 0.017 15.8 1.1 0.044 14.5 1.1 1.7 1 0 0 1 1 1 0 CoA binding domain Methyltransf_25 PF13649.6 CTQ28295.1 - 0.024 15.3 0.2 0.052 14.2 0.2 1.5 1 0 0 1 1 1 0 Methyltransferase domain 2-Hacid_dh_C PF02826.19 CTQ28295.1 - 0.1 12.0 0.1 0.2 11.0 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SBP_bac_5 PF00496.22 CTQ28296.1 - 1.4e-70 238.2 2.1 1.8e-70 237.8 2.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 CTQ28297.1 - 5.7e-27 94.6 16.2 5.7e-27 94.6 16.2 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Peptidase_M50 PF02163.22 CTQ28297.1 - 0.15 11.3 1.8 0.3 10.3 1.8 1.4 1 0 0 1 1 1 0 Peptidase family M50 BPD_transp_1 PF00528.22 CTQ28298.1 - 1.2e-22 80.5 15.2 1.2e-22 80.5 15.2 2.2 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component XK-related PF09815.9 CTQ28298.1 - 0.00041 19.5 2.5 0.00079 18.6 2.5 1.5 1 0 0 1 1 1 1 XK-related protein MscL PF01741.18 CTQ28298.1 - 0.73 10.1 2.9 1.9 8.8 2.9 1.7 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL ABC_tran PF00005.27 CTQ28299.1 - 1.5e-63 213.3 0.1 3.3e-31 108.6 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ28299.1 - 9.9e-17 61.7 13.0 2.6e-08 34.0 0.6 4.1 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 CTQ28299.1 - 2.5e-12 47.2 2.7 2.1e-05 24.8 0.2 3.5 2 2 0 2 2 2 2 AAA domain SMC_N PF02463.19 CTQ28299.1 - 1.5e-11 44.2 0.8 7.8e-05 22.2 0.0 3.0 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ28299.1 - 3.3e-10 40.6 11.1 3e-06 27.7 4.1 3.0 2 1 0 2 2 2 2 AAA ATPase domain oligo_HPY PF08352.12 CTQ28299.1 - 5.1e-10 39.7 0.1 0.0019 18.7 0.0 2.5 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_29 PF13555.6 CTQ28299.1 - 1.7e-08 34.1 0.2 0.0033 17.1 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ28299.1 - 1.1e-06 28.6 0.1 0.0085 16.0 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA PF00004.29 CTQ28299.1 - 1.5e-06 28.7 0.4 0.75 10.2 0.1 3.8 3 1 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 CTQ28299.1 - 1.4e-05 25.7 0.0 0.039 14.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_15 PF13175.6 CTQ28299.1 - 1.9e-05 24.5 0.0 0.11 12.1 0.0 3.0 3 0 0 3 3 3 1 AAA ATPase domain AAA_5 PF07728.14 CTQ28299.1 - 2.8e-05 24.1 1.1 1.2 9.1 0.0 3.5 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 CTQ28299.1 - 4.5e-05 23.2 4.2 1.1 8.9 0.0 4.2 3 1 1 4 4 4 2 Sigma-54 interaction domain PRK PF00485.18 CTQ28299.1 - 5.8e-05 22.9 0.0 0.069 12.9 0.0 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 CTQ28299.1 - 5.9e-05 23.0 5.9 0.069 13.1 0.0 3.3 2 1 0 3 3 3 2 NACHT domain Mg_chelatase PF01078.21 CTQ28299.1 - 6.3e-05 22.5 0.0 0.13 11.6 0.0 3.2 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 CTQ28299.1 - 0.00013 21.6 3.5 0.67 9.5 1.7 4.2 3 1 0 3 3 3 1 AAA domain AAA_33 PF13671.6 CTQ28299.1 - 0.00014 22.0 5.8 0.56 10.4 0.2 4.0 2 2 0 2 2 2 2 AAA domain TsaE PF02367.17 CTQ28299.1 - 0.00014 21.8 0.1 0.78 9.7 0.1 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE MobB PF03205.14 CTQ28299.1 - 0.00015 21.6 0.2 0.29 11.0 0.0 2.8 3 0 0 3 3 2 2 Molybdopterin guanine dinucleotide synthesis protein B TniB PF05621.11 CTQ28299.1 - 0.00016 21.2 1.6 2 7.8 0.1 4.5 4 0 0 4 4 4 1 Bacterial TniB protein IstB_IS21 PF01695.17 CTQ28299.1 - 0.00017 21.4 3.1 0.18 11.5 0.0 3.6 4 0 0 4 4 4 2 IstB-like ATP binding protein NTPase_1 PF03266.15 CTQ28299.1 - 0.00017 21.6 0.1 4.6 7.1 0.0 3.4 3 0 0 3 3 3 0 NTPase T2SSE PF00437.20 CTQ28299.1 - 0.00025 20.2 1.4 0.087 11.9 0.0 3.0 2 1 0 2 2 2 1 Type II/IV secretion system protein SbcCD_C PF13558.6 CTQ28299.1 - 0.00034 20.8 1.3 0.35 11.1 0.2 4.2 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_19 PF13245.6 CTQ28299.1 - 0.00039 20.8 0.6 0.67 10.3 0.0 2.7 3 0 0 3 3 2 2 AAA domain AAA_7 PF12775.7 CTQ28299.1 - 0.00062 19.3 0.0 0.54 9.7 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_24 PF13479.6 CTQ28299.1 - 0.00068 19.4 0.0 0.75 9.5 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 CTQ28299.1 - 0.0013 19.2 0.0 1.2 9.7 0.0 2.8 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.17 CTQ28299.1 - 0.0014 18.8 1.1 0.92 9.6 0.1 2.6 2 0 0 2 2 2 1 Helicase HerA, central domain DEAD PF00270.29 CTQ28299.1 - 0.0021 17.9 1.9 0.5 10.1 0.5 3.1 2 2 0 2 2 2 1 DEAD/DEAH box helicase RNA_helicase PF00910.22 CTQ28299.1 - 0.0028 18.0 0.0 1.5 9.3 0.0 2.5 2 0 0 2 2 2 1 RNA helicase NB-ARC PF00931.22 CTQ28299.1 - 0.0034 16.6 0.1 2.1 7.5 0.0 2.5 2 0 0 2 2 2 1 NB-ARC domain CbiA PF01656.23 CTQ28299.1 - 0.0035 17.4 1.9 0.74 9.9 0.1 2.8 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain PduV-EutP PF10662.9 CTQ28299.1 - 0.0037 17.0 1.1 3.3 7.4 0.0 2.7 3 0 0 3 3 2 1 Ethanolamine utilisation - propanediol utilisation MMR_HSR1 PF01926.23 CTQ28299.1 - 0.0041 17.2 0.0 1.9 8.6 0.0 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 CTQ28299.1 - 0.0041 17.3 0.1 1.4 9.2 0.0 2.4 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase APS_kinase PF01583.20 CTQ28299.1 - 0.0051 16.7 0.2 2 8.3 0.0 2.6 2 0 0 2 2 2 1 Adenylylsulphate kinase ATP-synt_ab PF00006.25 CTQ28299.1 - 0.0063 16.2 0.0 4.3 6.9 0.0 2.6 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain SRP54 PF00448.22 CTQ28299.1 - 0.0073 15.9 0.0 2.2 7.8 0.0 2.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Zeta_toxin PF06414.12 CTQ28299.1 - 0.0088 15.3 0.1 3.7 6.8 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin ATPase PF06745.13 CTQ28299.1 - 0.015 14.7 0.2 3.8 6.8 0.0 2.7 2 0 0 2 2 2 0 KaiC TrwB_AAD_bind PF10412.9 CTQ28299.1 - 0.016 14.2 0.1 2.5 6.9 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain PhoH PF02562.16 CTQ28299.1 - 0.016 14.6 0.4 4.6 6.6 0.0 3.0 3 0 0 3 3 3 0 PhoH-like protein cobW PF02492.19 CTQ28299.1 - 0.024 14.2 0.1 3.6 7.1 0.0 2.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Pox_A32 PF04665.12 CTQ28299.1 - 0.029 13.8 1.3 6.6 6.1 0.0 2.5 3 0 0 3 3 2 0 Poxvirus A32 protein G-alpha PF00503.20 CTQ28299.1 - 0.035 13.3 0.0 3.3 6.8 0.0 2.2 2 0 0 2 2 2 0 G-protein alpha subunit FtsK_SpoIIIE PF01580.18 CTQ28299.1 - 0.039 13.3 0.2 4.7 6.5 0.0 2.7 3 0 0 3 3 2 0 FtsK/SpoIIIE family AAA_28 PF13521.6 CTQ28299.1 - 0.055 13.7 0.0 12 6.1 0.0 2.7 2 0 0 2 2 2 0 AAA domain ResIII PF04851.15 CTQ28299.1 - 0.07 13.1 0.0 1.7 8.7 0.0 2.7 3 0 0 3 3 2 0 Type III restriction enzyme, res subunit AAA_13 PF13166.6 CTQ28299.1 - 0.076 11.6 0.0 3.8 6.0 0.0 2.9 4 0 0 4 4 3 0 AAA domain AAA_30 PF13604.6 CTQ28299.1 - 0.2 11.4 10.1 2.2 8.0 0.0 3.7 3 1 1 4 4 3 0 AAA domain Bac_luciferase PF00296.20 CTQ28300.1 - 3.3e-41 141.8 7.8 5e-41 141.1 7.8 1.3 1 0 0 1 1 1 1 Luciferase-like monooxygenase CMD PF02627.20 CTQ28301.1 - 1.2e-13 50.9 1.0 3.6e-13 49.4 0.2 2.3 2 0 0 2 2 2 1 Carboxymuconolactone decarboxylase family MFS_1 PF07690.16 CTQ28302.1 - 9.8e-36 123.4 69.8 2.8e-34 118.6 54.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28302.1 - 1.6e-10 40.5 14.4 1.6e-10 40.5 14.4 3.0 3 0 0 3 3 3 1 Sugar (and other) transporter MFS_4 PF06779.14 CTQ28302.1 - 0.032 13.5 42.3 0.041 13.2 42.3 1.0 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 CTQ28302.1 - 0.039 12.5 36.3 0.096 11.2 7.5 2.6 1 1 1 2 2 2 0 MFS/sugar transport protein Glyoxalase PF00903.25 CTQ28303.1 - 2.1e-09 37.7 0.0 2.4e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 CTQ28303.1 - 0.054 13.8 0.0 0.074 13.3 0.0 1.3 1 0 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 CTQ28303.1 - 0.11 13.3 0.1 0.14 13.0 0.1 1.2 1 0 0 1 1 1 0 Glyoxalase-like domain PPK2 PF03976.14 CTQ28304.1 - 1.3e-96 322.5 0.1 1.6e-96 322.3 0.1 1.0 1 0 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) Thymidylate_kin PF02223.17 CTQ28304.1 - 0.1 12.3 0.1 2.4 7.8 0.0 2.4 1 1 1 2 2 2 0 Thymidylate kinase CcdA PF07362.12 CTQ28305.1 - 0.00095 19.6 0.1 0.0014 19.0 0.1 1.3 1 1 0 1 1 1 1 Post-segregation antitoxin CcdA CcdB PF01845.17 CTQ28306.1 - 2e-28 98.6 0.1 2.2e-28 98.4 0.1 1.0 1 0 0 1 1 1 1 CcdB protein Ni_hydr_CYTB PF01292.20 CTQ28307.1 - 2.3e-19 69.7 17.8 2.8e-19 69.4 17.8 1.1 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 CTQ28307.1 - 0.12 12.9 29.7 0.42 11.2 12.9 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) OppC_N PF12911.7 CTQ28307.1 - 2.5 8.2 11.5 0.72 9.9 0.9 3.4 3 1 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C Fer4_11 PF13247.6 CTQ28308.1 - 1.1e-25 89.6 8.6 1.1e-25 89.6 8.6 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Form-deh_trans PF09163.11 CTQ28308.1 - 4e-19 68.1 0.1 7.6e-19 67.2 0.1 1.4 1 0 0 1 1 1 1 Formate dehydrogenase N, transmembrane Fer4_7 PF12838.7 CTQ28308.1 - 3e-14 53.3 25.4 3.6e-07 30.7 7.7 3.1 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ28308.1 - 7.9e-11 42.0 27.5 4.2e-06 26.8 9.2 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ28308.1 - 8.8e-11 41.8 27.2 1.3e-06 28.4 10.6 3.7 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ28308.1 - 1.3e-09 37.7 34.3 4.4e-05 23.4 3.0 5.0 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4 PF00037.27 CTQ28308.1 - 2.2e-07 30.4 36.9 3.7e-05 23.4 3.0 5.6 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_2 PF12797.7 CTQ28308.1 - 4.7e-07 29.5 28.3 0.0079 16.2 1.2 4.6 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 CTQ28308.1 - 6.7e-07 29.3 28.1 4e-06 26.9 7.8 3.8 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 CTQ28308.1 - 8.8e-07 29.4 17.8 0.037 14.6 3.6 4.3 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ28308.1 - 5.1e-06 26.6 32.7 0.0017 18.7 2.9 4.5 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 CTQ28308.1 - 0.00033 21.5 30.6 0.15 13.0 0.0 5.1 2 1 4 6 6 6 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 CTQ28308.1 - 0.0022 18.8 41.6 0.33 12.0 3.3 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain GP120 PF00516.18 CTQ28308.1 - 0.0097 14.6 0.3 0.016 13.8 0.3 1.3 1 0 0 1 1 1 1 Envelope glycoprotein GP120 Fer4_18 PF13746.6 CTQ28308.1 - 0.034 14.3 22.4 0.082 13.1 3.7 4.0 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 CTQ28308.1 - 0.076 12.8 0.6 0.076 12.8 0.6 4.1 2 1 2 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_22 PF17179.4 CTQ28308.1 - 0.079 13.8 18.3 0.21 12.4 2.1 3.8 3 1 1 4 4 4 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ28308.1 - 0.09 13.2 33.4 0.21 12.0 2.9 4.2 2 2 3 5 5 5 0 4Fe-4S dicluster domain APC_u14 PF16635.5 CTQ28308.1 - 0.1 13.2 0.0 0.18 12.4 0.0 1.4 1 0 0 1 1 1 0 Unstructured region on APC between SAMP and APC_crr Molybdopterin PF00384.22 CTQ28309.1 - 4.5e-25 88.5 0.0 1.2e-21 77.3 0.0 2.2 2 0 0 2 2 2 2 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ28309.1 - 1.9e-16 60.1 0.0 6.9e-16 58.2 0.0 2.0 1 1 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 CTQ28310.1 - 1.6e-20 72.8 0.2 3.9e-20 71.6 0.1 1.7 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain Molybdopterin PF00384.22 CTQ28310.1 - 1.5e-06 27.5 0.1 1.8e-06 27.2 0.1 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase TAT_signal PF10518.9 CTQ28310.1 - 0.031 14.1 3.3 0.084 12.8 3.3 1.8 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Rieske_3 PF18465.1 CTQ28310.1 - 0.11 12.7 0.7 0.53 10.6 0.5 2.1 2 1 1 3 3 3 0 Rieske 3Fe-4S EamA PF00892.20 CTQ28311.1 - 6.5e-13 49.0 42.8 2.5e-07 30.9 20.8 2.1 2 0 0 2 2 2 2 EamA-like transporter family PHO4 PF01384.20 CTQ28311.1 - 1.5 7.8 19.8 2.4 7.1 19.8 1.5 1 1 0 1 1 1 0 Phosphate transporter family 7TMR-DISM_7TM PF07695.11 CTQ28311.1 - 6.8 6.5 28.2 0.095 12.6 9.5 2.3 1 1 1 2 2 2 0 7TM diverse intracellular signalling adh_short_C2 PF13561.6 CTQ28312.1 - 4.3e-52 177.0 0.3 6.8e-52 176.4 0.3 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ28312.1 - 7.7e-51 172.3 0.0 9.6e-51 172.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ28312.1 - 4.1e-07 30.1 0.5 7.9e-07 29.1 0.5 1.6 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ28312.1 - 0.029 13.8 0.1 0.29 10.6 0.0 2.1 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family NAD_binding_1 PF00175.21 CTQ28313.1 - 9.8e-21 74.5 0.0 1.6e-20 73.8 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain Fer2 PF00111.27 CTQ28313.1 - 3.3e-15 55.8 4.6 7.3e-14 51.5 4.2 2.2 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 CTQ28313.1 - 1.3e-14 54.3 0.0 2.3e-14 53.5 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 CTQ28313.1 - 0.0021 18.2 0.0 0.16 12.1 0.0 2.2 2 0 0 2 2 2 1 Ferric reductase NAD binding domain Ring_hydroxyl_B PF00866.18 CTQ28314.1 - 2.6e-44 150.8 0.3 3e-44 150.6 0.3 1.0 1 0 0 1 1 1 1 Ring hydroxylating beta subunit SnoaL_4 PF13577.6 CTQ28314.1 - 8.1e-05 22.8 0.0 0.00014 22.0 0.0 1.4 1 1 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.7 CTQ28314.1 - 0.16 12.6 0.3 0.23 12.1 0.3 1.7 1 1 0 1 1 1 0 SnoaL-like domain Rieske PF00355.26 CTQ28315.1 - 3.5e-21 74.9 0.0 7e-21 74.0 0.0 1.5 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Ring_hydroxyl_A PF00848.19 CTQ28315.1 - 7.8e-19 68.5 0.4 1.2e-18 67.8 0.4 1.2 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) Rieske_2 PF13806.6 CTQ28315.1 - 0.024 14.6 0.0 0.045 13.7 0.0 1.4 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain Aromatic_hydrox PF11723.8 CTQ28315.1 - 0.15 11.6 0.1 1.2 8.6 0.0 2.4 2 1 0 2 2 2 0 Homotrimeric ring hydroxylase Dioxygenase_C PF00775.21 CTQ28316.1 - 7.9e-64 214.4 0.0 1e-63 214.1 0.0 1.1 1 0 0 1 1 1 1 Dioxygenase Dioxygenase_N PF04444.14 CTQ28316.1 - 1.8e-22 79.0 0.4 3e-22 78.3 0.4 1.4 1 0 0 1 1 1 1 Catechol dioxygenase N terminus CarboxypepD_reg PF13620.6 CTQ28316.1 - 3.4e-05 24.0 0.0 0.00014 22.0 0.0 1.9 2 0 0 2 2 2 1 Carboxypeptidase regulatory-like domain MIase PF02426.16 CTQ28317.1 - 1.4e-40 137.3 0.0 1.5e-40 137.2 0.0 1.0 1 0 0 1 1 1 1 Muconolactone delta-isomerase GYD PF08734.11 CTQ28317.1 - 0.0037 17.2 0.0 0.0052 16.7 0.0 1.1 1 0 0 1 1 1 1 GYD domain MR_MLE_C PF13378.6 CTQ28318.1 - 1.2e-46 159.1 1.5 1.7e-46 158.6 1.5 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 CTQ28318.1 - 5.2e-32 110.5 0.1 1.3e-31 109.3 0.1 1.6 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HHH_5 PF14520.6 CTQ28318.1 - 0.052 14.2 0.4 4.2 8.1 0.0 2.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain IclR PF01614.18 CTQ28319.1 - 6e-32 110.2 0.4 1.5e-31 108.9 0.1 1.8 2 0 0 2 2 2 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 CTQ28319.1 - 2.4e-13 49.7 0.4 2.4e-13 49.7 0.4 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain Rrf2 PF02082.20 CTQ28319.1 - 0.00014 22.1 0.0 0.00045 20.5 0.0 1.8 1 0 0 1 1 1 1 Transcriptional regulator HTH_9 PF08221.11 CTQ28319.1 - 0.00066 19.7 0.9 0.0029 17.7 0.4 2.2 3 0 0 3 3 3 1 RNA polymerase III subunit RPC82 helix-turn-helix domain MarR_2 PF12802.7 CTQ28319.1 - 0.00099 19.0 1.4 0.0018 18.1 0.2 2.1 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.12 CTQ28319.1 - 0.001 19.0 0.1 0.0047 16.8 0.0 2.1 2 0 0 2 2 2 1 HTH domain GntR PF00392.21 CTQ28319.1 - 0.0011 18.6 0.0 0.0044 16.6 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_5 PF01022.20 CTQ28319.1 - 0.0033 17.2 0.0 0.012 15.4 0.0 2.0 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_DeoR PF08220.12 CTQ28319.1 - 0.012 15.3 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_24 PF13412.6 CTQ28319.1 - 0.038 13.6 0.2 0.11 12.1 0.2 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TrmB PF01978.19 CTQ28319.1 - 0.045 13.6 0.0 0.097 12.6 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF977 PF06163.11 CTQ28319.1 - 0.089 12.7 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) Dimerisation2 PF16864.5 CTQ28319.1 - 0.096 12.7 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Dimerisation domain Cullin PF00888.22 CTQ28319.1 - 0.12 10.9 0.0 0.16 10.5 0.0 1.1 1 0 0 1 1 1 0 Cullin family MFS_1 PF07690.16 CTQ28320.1 - 8e-43 146.7 97.4 2e-39 135.6 57.0 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28320.1 - 0.31 9.8 30.5 1.7 7.4 10.7 3.0 2 2 0 2 2 2 0 Sugar (and other) transporter TMEM100 PF16311.5 CTQ28320.1 - 0.39 10.3 3.5 0.37 10.4 0.2 2.6 2 0 0 2 2 2 0 Transmembrane protein 100 TetR_N PF00440.23 CTQ28321.1 - 8.6e-12 44.7 0.4 1.6e-11 43.8 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 CTQ28321.1 - 1.7e-06 28.2 0.4 1.7e-06 28.2 0.4 2.1 2 0 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_C_27 PF17935.1 CTQ28321.1 - 0.00056 19.9 0.4 0.004 17.2 0.0 2.2 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_17 PF17922.1 CTQ28321.1 - 0.0094 16.0 0.0 0.016 15.3 0.0 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain MFS_1 PF07690.16 CTQ28322.1 - 5.2e-11 42.1 68.0 5.2e-11 42.1 68.0 2.2 1 1 1 2 2 2 1 Major Facilitator Superfamily Molybdopterin PF00384.22 CTQ28323.1 - 6.3e-171 569.1 0.0 7.7e-171 568.8 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ28323.1 - 4.6e-21 74.9 0.0 1.6e-20 73.2 0.0 1.9 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Nitr_red_alph_N PF14710.6 CTQ28323.1 - 4.7e-17 62.2 4.3 1.6e-16 60.5 4.3 2.0 1 0 0 1 1 1 1 Respiratory nitrate reductase alpha N-terminal Molybdop_Fe4S4 PF04879.16 CTQ28323.1 - 0.004 17.1 0.2 0.013 15.5 0.1 1.9 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain Fer4_11 PF13247.6 CTQ28324.1 - 7.9e-38 128.6 5.3 1.9e-37 127.4 5.3 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Nitr_red_bet_C PF14711.6 CTQ28324.1 - 2.3e-29 100.9 0.0 4.3e-29 100.0 0.0 1.5 1 0 0 1 1 1 1 Respiratory nitrate reductase beta C-terminal Fer4_10 PF13237.6 CTQ28324.1 - 1.7e-08 34.5 15.8 9.1e-06 25.7 3.8 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 CTQ28324.1 - 9e-08 32.6 17.8 4.9e-05 23.8 5.1 3.6 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ28324.1 - 8.4e-06 25.6 18.8 0.0056 16.7 0.2 3.9 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 CTQ28324.1 - 0.00096 19.3 18.3 0.0078 16.4 4.2 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 CTQ28324.1 - 0.01 15.6 24.0 0.016 15.0 2.0 4.9 5 0 0 5 5 4 0 4Fe-4S binding domain Fer4_2 PF12797.7 CTQ28324.1 - 0.01 15.9 22.0 0.014 15.5 1.9 4.0 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_13 PF13370.6 CTQ28324.1 - 0.018 15.5 8.9 0.036 14.6 0.2 3.5 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 CTQ28324.1 - 0.023 15.4 5.9 2.2 9.1 0.1 3.3 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_21 PF14697.6 CTQ28324.1 - 0.042 14.0 21.4 0.076 13.2 4.1 3.1 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ28324.1 - 0.16 12.4 0.1 0.16 12.4 0.1 3.8 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 CTQ28324.1 - 0.19 12.3 15.0 1.4 9.5 0.2 3.9 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ28324.1 - 0.26 11.9 24.6 0.22 12.1 0.9 4.1 4 0 0 4 4 3 0 4Fe-4S binding domain Nitrate_red_del PF02613.15 CTQ28325.1 - 3.7e-12 46.4 0.5 9.6e-12 45.1 0.2 1.8 1 1 1 2 2 2 1 Nitrate reductase delta subunit Nitrate_red_gam PF02665.14 CTQ28326.1 - 6.4e-79 264.5 11.6 7.2e-79 264.4 11.6 1.0 1 0 0 1 1 1 1 Nitrate reductase gamma subunit Acetyltransf_2 PF00797.17 CTQ28327.1 - 2.9e-82 276.1 0.0 3.4e-82 275.9 0.0 1.0 1 0 0 1 1 1 1 N-acetyltransferase SnoaL PF07366.12 CTQ28327.1 - 0.023 14.5 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase BPD_transp_1 PF00528.22 CTQ28328.1 - 4e-26 91.9 37.2 1.4e-14 54.3 14.8 4.0 3 1 2 5 5 5 2 Binding-protein-dependent transport system inner membrane component SBP_bac_6 PF13343.6 CTQ28329.1 - 4.3e-32 111.5 1.1 5.8e-32 111.1 1.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 CTQ28329.1 - 9.1e-28 97.6 5.3 1.2e-27 97.1 5.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 CTQ28329.1 - 1.3e-25 90.8 2.8 1.5e-25 90.6 2.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ28329.1 - 2.1e-17 64.1 6.3 2.8e-17 63.7 6.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like_2 PF12849.7 CTQ28329.1 - 0.0064 16.2 1.0 0.65 9.6 1.0 2.6 1 1 0 1 1 1 1 PBP superfamily domain Rhomboid_N PF12122.8 CTQ28329.1 - 0.012 15.7 0.0 3.5 7.9 0.0 2.7 3 0 0 3 3 3 0 Cytoplasmic N-terminal domain of rhomboid serine protease PPR_2 PF13041.6 CTQ28329.1 - 0.037 14.2 0.0 0.076 13.2 0.0 1.5 1 0 0 1 1 1 0 PPR repeat family ABC_tran PF00005.27 CTQ28330.1 - 1e-35 123.2 0.0 1.4e-35 122.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28330.1 - 4.3e-10 39.9 0.1 0.00019 21.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ28330.1 - 4.8e-05 23.8 1.6 0.00037 20.9 1.6 2.0 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ28330.1 - 0.00033 20.6 0.0 0.00062 19.7 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase NACHT PF05729.12 CTQ28330.1 - 0.00042 20.3 0.3 0.063 13.2 0.1 2.2 2 0 0 2 2 2 1 NACHT domain Rad17 PF03215.15 CTQ28330.1 - 0.00059 19.8 0.0 0.00088 19.2 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 CTQ28330.1 - 0.00075 19.2 0.0 0.0014 18.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 CTQ28330.1 - 0.0028 17.9 0.1 0.017 15.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 CTQ28330.1 - 0.0075 16.5 0.1 0.027 14.7 0.1 1.9 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 CTQ28330.1 - 0.013 15.1 0.1 0.052 13.1 0.1 1.9 2 1 0 2 2 2 0 AAA domain AAA PF00004.29 CTQ28330.1 - 0.024 15.1 0.0 0.22 11.9 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 CTQ28330.1 - 0.025 14.6 0.1 0.052 13.6 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 CTQ28330.1 - 0.031 14.8 0.0 0.049 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CTQ28330.1 - 0.045 13.9 0.4 0.31 11.2 0.1 2.1 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 CTQ28330.1 - 0.05 13.8 0.4 0.84 9.9 0.4 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 CTQ28330.1 - 0.055 14.0 0.0 0.084 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 CTQ28330.1 - 0.07 12.5 0.0 11 5.3 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 CTQ28330.1 - 0.096 12.8 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase ATPase_2 PF01637.18 CTQ28330.1 - 0.1 12.5 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_14 PF13173.6 CTQ28330.1 - 0.15 12.1 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 CTQ28330.1 - 0.2 12.0 0.0 0.43 11.0 0.0 1.5 1 0 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 CTQ28330.1 - 0.24 10.5 0.0 0.46 9.6 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain Flavin_Reduct PF01613.18 CTQ28331.1 - 4.2e-12 46.4 0.0 5.3e-12 46.0 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain Arabinose_bd PF12625.7 CTQ28331.1 - 0.064 13.3 0.1 0.34 11.0 0.0 1.9 2 0 0 2 2 2 0 Arabinose-binding domain of AraC transcription regulator, N-term Tautomerase PF01361.21 CTQ28332.1 - 1.9e-14 53.3 0.0 2.6e-14 52.9 0.0 1.2 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_2 PF14552.6 CTQ28332.1 - 0.0042 17.1 0.0 0.0053 16.8 0.0 1.1 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_3 PF14832.6 CTQ28332.1 - 0.029 14.6 0.0 0.039 14.2 0.0 1.3 1 1 0 1 1 1 0 Putative oxalocrotonate tautomerase enzyme Mqo PF06039.15 CTQ28332.1 - 0.12 10.9 0.1 0.13 10.8 0.1 1.0 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) GST_N_3 PF13417.6 CTQ28333.1 - 1.7e-08 34.7 0.0 3.5e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ28333.1 - 1.7e-06 28.2 0.0 4.9e-06 26.7 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 CTQ28333.1 - 9e-06 26.0 0.0 1.8e-05 25.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 CTQ28333.1 - 0.001 19.2 0.0 0.0024 18.0 0.0 1.6 1 1 1 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 CTQ28333.1 - 0.0029 17.6 1.1 0.0072 16.3 0.3 2.2 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 CTQ28333.1 - 0.07 13.4 0.0 0.17 12.1 0.0 1.6 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain SBP_bac_3 PF00497.20 CTQ28334.1 - 2.7e-31 108.8 0.0 3.2e-31 108.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 ABC_tran PF00005.27 CTQ28335.1 - 4.6e-35 121.1 0.0 6.2e-35 120.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28335.1 - 4e-17 63.0 0.2 5.2e-09 36.3 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28335.1 - 5.3e-09 35.8 0.0 0.00022 20.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ28335.1 - 2.8e-05 23.7 0.0 5.6e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 CTQ28335.1 - 3e-05 23.0 0.3 0.041 12.7 0.1 2.9 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_16 PF13191.6 CTQ28335.1 - 3.7e-05 24.2 0.1 8.1e-05 23.1 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_13 PF13166.6 CTQ28335.1 - 4.2e-05 22.4 0.0 0.032 12.9 0.0 2.1 1 1 0 2 2 2 2 AAA domain AAA_15 PF13175.6 CTQ28335.1 - 0.00012 21.9 0.0 0.01 15.6 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain ATPase_2 PF01637.18 CTQ28335.1 - 0.00034 20.6 0.0 0.00078 19.4 0.0 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_23 PF13476.6 CTQ28335.1 - 0.00037 21.0 0.1 0.00075 20.1 0.0 1.5 2 0 0 2 2 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ28335.1 - 0.00063 19.7 0.0 0.0015 18.4 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 CTQ28335.1 - 0.00096 19.4 0.2 0.0035 17.6 0.2 2.1 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 CTQ28335.1 - 0.0017 18.5 0.1 0.38 11.0 0.1 3.1 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_14 PF13173.6 CTQ28335.1 - 0.0036 17.4 0.0 0.057 13.4 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 CTQ28335.1 - 0.0056 16.8 0.0 0.012 15.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain cobW PF02492.19 CTQ28335.1 - 0.009 15.6 0.1 0.033 13.8 0.0 1.9 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 CTQ28335.1 - 0.017 15.1 0.0 0.048 13.6 0.0 1.7 2 0 0 2 2 2 0 NACHT domain MMR_HSR1 PF01926.23 CTQ28335.1 - 0.018 15.1 0.6 0.31 11.1 0.6 2.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.6 CTQ28335.1 - 0.018 14.8 0.0 0.049 13.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 CTQ28335.1 - 0.025 15.1 0.0 0.055 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 CTQ28335.1 - 0.028 14.3 0.0 0.068 13.1 0.0 1.7 2 0 0 2 2 1 0 Adenylylsulphate kinase AAA_24 PF13479.6 CTQ28335.1 - 0.031 14.0 0.1 0.063 13.0 0.0 1.6 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.6 CTQ28335.1 - 0.048 13.2 0.3 0.2 11.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain CobU PF02283.16 CTQ28335.1 - 0.055 13.0 0.1 2.5 7.6 0.0 2.7 2 1 1 3 3 3 0 Cobinamide kinase / cobinamide phosphate guanyltransferase Adeno_IVa2 PF02456.15 CTQ28335.1 - 0.058 12.2 0.0 0.097 11.4 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein G-alpha PF00503.20 CTQ28335.1 - 0.06 12.5 0.0 0.59 9.2 0.0 2.0 1 1 0 2 2 2 0 G-protein alpha subunit AAA_5 PF07728.14 CTQ28335.1 - 0.063 13.3 0.1 0.72 9.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_27 PF13514.6 CTQ28335.1 - 0.077 12.6 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 CTQ28335.1 - 0.081 12.8 0.0 0.26 11.2 0.0 1.7 2 0 0 2 2 2 0 Rad17 P-loop domain oligo_HPY PF08352.12 CTQ28335.1 - 0.088 13.3 0.0 0.19 12.2 0.0 1.6 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region AAA PF00004.29 CTQ28335.1 - 0.1 13.0 0.0 1.1 9.7 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 CTQ28335.1 - 0.1 12.8 0.1 0.48 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain RNA12 PF10443.9 CTQ28335.1 - 0.1 11.3 0.0 0.13 11.0 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein NB-ARC PF00931.22 CTQ28335.1 - 0.11 11.7 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain Zeta_toxin PF06414.12 CTQ28335.1 - 0.13 11.5 0.0 0.24 10.6 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin BPD_transp_1 PF00528.22 CTQ28336.1 - 2.5e-16 60.0 18.1 2.5e-16 60.0 18.1 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Acetyltransf_1 PF00583.25 CTQ28337.1 - 4.6e-12 46.2 0.2 6.2e-12 45.8 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ28337.1 - 2.3e-08 34.0 0.0 3e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ28337.1 - 9.3e-08 32.4 0.1 1.3e-07 31.9 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 CTQ28337.1 - 0.0018 18.2 0.0 0.0034 17.3 0.0 1.4 1 0 0 1 1 1 1 ESCO1/2 acetyl-transferase NMT PF01233.19 CTQ28337.1 - 0.0022 17.8 0.0 0.0031 17.4 0.0 1.2 1 0 0 1 1 1 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Acetyltransf_CG PF14542.6 CTQ28337.1 - 0.0059 16.7 0.1 0.014 15.5 0.1 1.7 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 CTQ28337.1 - 0.0067 16.4 0.1 0.01 15.8 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 CTQ28337.1 - 0.082 13.0 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain CIDE-N PF02017.15 CTQ28337.1 - 0.11 12.5 0.0 0.59 10.2 0.0 2.0 2 0 0 2 2 2 0 CIDE-N domain SBP_bac_3 PF00497.20 CTQ28338.1 - 3.5e-40 137.8 0.2 4.3e-40 137.5 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ28338.1 - 0.12 12.6 0.0 0.22 11.8 0.0 1.5 1 1 0 1 1 1 0 Ligated ion channel L-glutamate- and glycine-binding site Bac_luciferase PF00296.20 CTQ28339.1 - 1.4e-63 215.3 2.2 2e-63 214.7 2.2 1.3 1 0 0 1 1 1 1 Luciferase-like monooxygenase Peptidase_M20 PF01546.28 CTQ28340.1 - 4.3e-30 105.0 0.5 5.4e-30 104.6 0.5 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ28340.1 - 8.9e-12 44.9 0.0 2.1e-11 43.7 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Bac_luciferase PF00296.20 CTQ28341.1 - 2.5e-29 102.7 12.7 1.2e-28 100.5 12.7 1.8 1 1 0 1 1 1 1 Luciferase-like monooxygenase Glyco_tranf_2_4 PF13704.6 CTQ28341.1 - 0.0088 16.5 0.0 0.029 14.9 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase family 2 SKI PF01202.22 CTQ28342.1 - 0.00011 22.3 0.0 0.00033 20.8 0.0 1.7 2 0 0 2 2 2 1 Shikimate kinase AAA_33 PF13671.6 CTQ28342.1 - 0.00016 21.8 0.1 0.00023 21.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CTQ28342.1 - 0.0002 21.9 0.0 0.00046 20.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 CTQ28342.1 - 0.0002 21.6 0.3 0.00044 20.5 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CTQ28342.1 - 0.00021 21.6 0.0 0.0024 18.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain Cytidylate_kin PF02224.18 CTQ28342.1 - 0.00091 19.0 0.0 0.0013 18.5 0.0 1.2 1 0 0 1 1 1 1 Cytidylate kinase AAA_16 PF13191.6 CTQ28342.1 - 0.0019 18.6 0.0 0.0034 17.8 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 CTQ28342.1 - 0.0058 16.6 0.0 0.012 15.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 CTQ28342.1 - 0.0068 16.8 0.0 0.011 16.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 CTQ28342.1 - 0.0074 16.2 0.0 0.021 14.7 0.0 1.7 2 0 0 2 2 2 1 NACHT domain RNA_helicase PF00910.22 CTQ28342.1 - 0.013 15.9 0.0 0.02 15.3 0.0 1.3 1 0 0 1 1 1 0 RNA helicase ABC_tran PF00005.27 CTQ28342.1 - 0.013 16.0 0.0 0.024 15.2 0.0 1.4 1 0 0 1 1 1 0 ABC transporter Ploopntkinase3 PF18751.1 CTQ28342.1 - 0.014 15.3 0.2 2.2 8.1 0.0 2.3 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 CPT PF07931.12 CTQ28342.1 - 0.025 14.4 0.0 0.046 13.6 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PRK PF00485.18 CTQ28342.1 - 0.037 13.8 0.0 0.058 13.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family DUF87 PF01935.17 CTQ28342.1 - 0.052 13.6 0.0 0.081 13.0 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_17 PF13207.6 CTQ28342.1 - 0.061 13.8 0.0 0.15 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 CTQ28342.1 - 0.066 13.3 0.0 0.11 12.6 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase Cytidylate_kin2 PF13189.6 CTQ28342.1 - 0.07 13.2 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Cytidylate kinase-like family AAA_29 PF13555.6 CTQ28342.1 - 0.075 12.8 0.5 0.17 11.6 0.5 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ28342.1 - 0.094 12.6 0.0 0.21 11.5 0.0 1.5 2 0 0 2 2 2 0 RsgA GTPase C-C_Bond_Lyase PF15617.6 CTQ28342.1 - 0.097 11.8 0.1 0.13 11.4 0.1 1.1 1 0 0 1 1 1 0 C-C_Bond_Lyase of the TIM-Barrel fold APS_kinase PF01583.20 CTQ28342.1 - 0.14 12.1 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase NB-ARC PF00931.22 CTQ28342.1 - 0.18 11.0 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.6 CTQ28342.1 - 0.21 11.3 0.0 0.33 10.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 CTQ28342.1 - 0.3 10.9 0.0 0.4 10.4 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein LysR_substrate PF03466.20 CTQ28343.1 - 3.9e-40 137.5 3.1 6e-40 136.9 3.1 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28343.1 - 2.6e-21 75.3 1.8 5.5e-21 74.3 1.8 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_20 PF12840.7 CTQ28343.1 - 0.028 14.5 0.5 0.11 12.6 0.5 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain Mga PF05043.13 CTQ28343.1 - 0.058 14.0 0.0 0.13 12.9 0.0 1.5 1 0 0 1 1 1 0 Mga helix-turn-helix domain Cro PF09048.10 CTQ28343.1 - 0.082 13.0 0.0 0.25 11.4 0.0 1.8 1 0 0 1 1 1 0 Cro AA_permease PF00324.21 CTQ28344.1 - 1.2e-126 423.2 40.9 1.4e-126 422.9 40.9 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ28344.1 - 4.5e-42 144.4 44.3 5.7e-42 144.0 44.3 1.0 1 0 0 1 1 1 1 Amino acid permease DUF903 PF06004.12 CTQ28345.1 - 4.9e-23 80.8 1.5 5.6e-23 80.6 1.5 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF903) LPAM_1 PF08139.12 CTQ28345.1 - 0.1 13.1 6.0 1 10.0 6.0 2.1 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site SGL PF08450.12 CTQ28346.1 - 8.4e-11 41.9 0.2 0.013 15.1 0.1 3.1 1 1 2 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region PQQ PF01011.21 CTQ28346.1 - 2.7e-06 27.0 0.1 1 9.4 0.1 4.5 4 0 0 4 4 4 2 PQQ enzyme repeat Glu_cyclase_2 PF05096.12 CTQ28346.1 - 2.7e-05 23.7 0.2 0.086 12.3 0.0 2.4 1 1 1 2 2 2 2 Glutamine cyclotransferase PQQ_2 PF13360.6 CTQ28346.1 - 0.0001 22.0 1.9 0.00029 20.5 1.2 2.1 1 1 0 1 1 1 1 PQQ-like domain Cytochrom_D1 PF02239.16 CTQ28346.1 - 0.00017 20.3 0.1 0.066 11.7 0.0 2.8 3 0 0 3 3 3 2 Cytochrome D1 heme domain Lactonase PF10282.9 CTQ28346.1 - 0.00048 19.5 0.8 2 7.6 0.0 3.4 2 1 2 4 4 4 2 Lactonase, 7-bladed beta-propeller Phytase-like PF13449.6 CTQ28346.1 - 0.0072 16.3 0.6 0.057 13.4 0.2 2.4 1 1 1 2 2 2 1 Esterase-like activity of phytase PQQ_3 PF13570.6 CTQ28346.1 - 0.0082 16.6 2.8 8.3 7.0 0.1 4.5 4 1 0 4 4 4 1 PQQ-like domain RcsD_ABL PF16359.5 CTQ28346.1 - 0.11 12.6 0.0 0.27 11.4 0.0 1.6 1 0 0 1 1 1 0 RcsD-ABL domain TonB_dep_Rec PF00593.24 CTQ28347.1 - 4.9e-56 191.5 31.0 4.9e-56 191.5 31.0 2.0 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 CTQ28347.1 - 7.7e-22 77.9 5.5 8.2e-22 77.8 3.2 2.2 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain OMP_b-brl_3 PF14905.6 CTQ28347.1 - 2e-12 46.8 3.5 2e-12 46.8 3.5 2.0 2 0 0 2 2 2 1 Outer membrane protein beta-barrel family Amidohydro_3 PF07969.11 CTQ28348.1 - 2e-72 245.2 2.5 2.3e-72 245.0 2.5 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 CTQ28348.1 - 7.9e-16 58.3 0.2 3e-15 56.4 0.0 1.9 2 0 0 2 2 2 1 Amidohydrolase family TatD_DNase PF01026.21 CTQ28348.1 - 0.11 11.8 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 TatD related DNase DUF406 PF04175.12 CTQ28349.1 - 1.8e-29 102.1 0.4 2e-29 101.9 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF406) IU_nuc_hydro PF01156.19 CTQ28351.1 - 3.3e-90 302.8 0.1 3.7e-90 302.6 0.1 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase ADH_N_2 PF16884.5 CTQ28352.1 - 6.8e-45 151.4 0.0 1.4e-44 150.4 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain of oxidoreductase ADH_zinc_N PF00107.26 CTQ28352.1 - 1.1e-17 64.2 0.0 1.6e-17 63.7 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 CTQ28352.1 - 2.3e-12 48.1 0.0 3.6e-12 47.5 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase HTH_3 PF01381.22 CTQ28353.1 - 6e-13 48.6 0.0 9e-13 48.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 CTQ28353.1 - 2.3e-09 37.1 0.0 4.1e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 CTQ28353.1 - 2.3e-09 37.4 0.6 4e-09 36.7 0.6 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 CTQ28353.1 - 7.9e-05 22.3 0.0 0.00014 21.5 0.0 1.5 1 0 0 1 1 1 1 Cupin domain HTH_25 PF13413.6 CTQ28353.1 - 0.00026 20.8 0.2 0.00047 20.0 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 CTQ28353.1 - 0.00049 20.5 0.0 0.00078 19.8 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 CTQ28353.1 - 0.13 12.2 0.4 0.26 11.3 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain TetR_N PF00440.23 CTQ28353.1 - 0.15 11.9 0.0 0.79 9.6 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_IclR PF09339.10 CTQ28353.1 - 0.16 11.8 0.3 0.55 10.1 0.0 1.9 2 0 0 2 2 2 0 IclR helix-turn-helix domain Acetyltransf_4 PF13420.7 CTQ28355.1 - 1.4e-18 67.5 0.0 1.6e-18 67.3 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ28355.1 - 5.6e-16 58.8 0.1 7.2e-16 58.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 CTQ28355.1 - 1.9e-12 48.1 0.1 2.2e-12 47.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ28355.1 - 1.5e-09 37.8 0.0 2.1e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ28355.1 - 1.8e-09 37.9 0.1 2.7e-09 37.3 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ28355.1 - 2.4e-09 37.0 0.0 4.7e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein GNAT_acetyltran PF12746.7 CTQ28355.1 - 1.1e-06 28.4 0.0 1.3e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_CG PF14542.6 CTQ28355.1 - 0.00032 20.8 0.0 0.00052 20.1 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 CTQ28355.1 - 0.0082 16.2 0.1 0.057 13.5 0.1 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain DMT_YdcZ PF04657.13 CTQ28356.1 - 2.7e-19 69.8 23.7 3e-19 69.7 23.7 1.0 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ DUF872 PF05915.12 CTQ28356.1 - 2 8.6 6.7 1.5 9.1 3.4 2.1 2 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF2526 PF10735.9 CTQ28357.1 - 2.1e-43 146.4 6.0 2.3e-43 146.2 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2526) Acyl-CoA_ox_N PF14749.6 CTQ28357.1 - 0.013 16.0 0.5 0.014 15.9 0.5 1.1 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal SBP_bac_5 PF00496.22 CTQ28358.1 - 6.9e-95 318.2 5.6 9.8e-95 317.7 5.6 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Aldedh PF00171.22 CTQ28359.1 - 1.7e-136 455.5 0.3 1.9e-136 455.3 0.3 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Abhydrolase_6 PF12697.7 CTQ28360.1 - 4.7e-18 66.6 2.1 5.6e-18 66.4 2.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 CTQ28360.1 - 5.5e-16 59.0 0.0 9.1e-16 58.3 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CTQ28360.1 - 3.1e-08 33.2 0.0 4.8e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 CTQ28360.1 - 0.00018 21.7 0.1 0.00022 21.4 0.1 1.3 1 0 0 1 1 1 1 Thioesterase domain PGAP1 PF07819.13 CTQ28360.1 - 0.0028 17.4 0.0 0.45 10.2 0.0 2.2 2 0 0 2 2 2 2 PGAP1-like protein Lipase_3 PF01764.25 CTQ28360.1 - 0.049 13.5 0.2 0.074 12.9 0.2 1.2 1 0 0 1 1 1 0 Lipase (class 3) Kazal_2 PF07648.15 CTQ28360.1 - 0.053 13.7 0.0 0.095 12.8 0.0 1.3 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain Abhydrolase_3 PF07859.13 CTQ28360.1 - 0.077 12.8 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF915 PF06028.11 CTQ28360.1 - 0.1 11.9 0.1 0.33 10.3 0.0 1.7 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) Toxin_GhoT_OrtT PF10753.9 CTQ28361.1 - 2.3e-25 88.6 6.8 2.6e-25 88.4 6.8 1.0 1 0 0 1 1 1 1 Toxin GhoT_OrtT DUF5325 PF17259.2 CTQ28361.1 - 0.014 15.3 1.5 0.017 15.0 1.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5325) PelG PF16933.5 CTQ28361.1 - 0.021 13.7 4.3 0.021 13.7 4.3 1.0 1 0 0 1 1 1 0 Putative exopolysaccharide Exporter (EPS-E) PsbN PF02468.15 CTQ28363.1 - 0.046 13.6 0.0 0.078 12.8 0.0 1.5 1 0 0 1 1 1 0 Photosystem II reaction centre N protein (psbN) Aldedh PF00171.22 CTQ28364.1 - 5.7e-164 546.0 0.2 6.4e-164 545.8 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 CTQ28364.1 - 0.18 10.8 0.0 0.29 10.1 0.0 1.5 1 1 0 1 1 1 0 Acyl-CoA reductase (LuxC) BPD_transp_1 PF00528.22 CTQ28365.1 - 2.6e-10 40.3 16.4 2.6e-10 40.3 16.4 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ28366.1 - 7.2e-16 58.5 18.9 7.2e-16 58.5 18.9 2.3 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component DUF1182 PF06681.13 CTQ28366.1 - 0.011 15.3 2.0 0.011 15.3 2.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1182) ABC_tran PF00005.27 CTQ28367.1 - 2.9e-33 115.3 0.0 4.9e-33 114.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 CTQ28367.1 - 1.2e-14 54.2 0.5 3.1e-14 52.9 0.5 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 CTQ28367.1 - 9.7e-06 25.6 0.3 0.01 15.7 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28367.1 - 0.0052 16.2 0.8 0.091 12.2 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain PhoH PF02562.16 CTQ28367.1 - 0.028 13.9 0.1 5.4 6.4 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein AAA_22 PF13401.6 CTQ28367.1 - 0.028 14.7 0.7 0.16 12.2 0.7 2.1 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CTQ28367.1 - 0.06 13.7 1.0 0.22 11.9 1.0 2.2 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 CTQ28367.1 - 0.089 12.5 0.1 0.22 11.3 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 CTQ28367.1 - 0.14 12.6 0.5 1.4 9.4 0.5 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SBP_bac_8 PF13416.6 CTQ28368.1 - 2.2e-24 86.7 4.0 2.9e-24 86.4 4.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ28368.1 - 1.6e-20 74.3 6.2 2.1e-20 73.9 6.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ28368.1 - 7.7e-14 51.7 1.0 4.8e-09 36.0 0.2 2.1 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein Ral PF11058.8 CTQ28368.1 - 0.013 15.0 0.0 0.068 12.7 0.0 2.0 2 0 0 2 2 2 0 Antirestriction protein Ral Glyco_hydro_62 PF03664.13 CTQ28368.1 - 0.056 12.8 0.5 0.13 11.6 0.0 1.7 2 0 0 2 2 2 0 Glycosyl hydrolase family 62 Phosphonate-bd PF12974.7 CTQ28368.1 - 0.093 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein UPF0004 PF00919.20 CTQ28368.1 - 0.14 12.2 0.0 0.32 11.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein family UPF0004 Aminotran_1_2 PF00155.21 CTQ28369.1 - 2.4e-32 112.5 0.0 3.3e-32 112.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 CTQ28369.1 - 4.5e-12 45.4 0.0 1.5e-11 43.8 0.0 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Cys_Met_Meta_PP PF01053.20 CTQ28369.1 - 0.028 13.0 0.0 0.043 12.3 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme APH PF01636.23 CTQ28369.1 - 0.037 14.0 2.1 0.049 13.5 0.7 1.9 2 0 0 2 2 2 0 Phosphotransferase enzyme family GGDEF_2 PF17853.1 CTQ28369.1 - 0.059 13.6 0.1 0.22 11.8 0.1 2.0 1 0 0 1 1 1 0 GGDEF-like domain Aminotran_MocR PF12897.7 CTQ28369.1 - 0.11 11.2 0.0 0.14 11.0 0.0 1.2 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Cyt_bd_oxida_I PF01654.17 CTQ28371.1 - 1e-165 551.5 22.5 1.1e-165 551.3 22.5 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I DUF4235 PF14019.6 CTQ28371.1 - 0.036 14.1 7.3 0.055 13.6 0.2 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF4235) Cyt_bd_oxida_II PF02322.15 CTQ28372.1 - 1.8e-95 319.8 34.3 2.1e-95 319.6 34.3 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II TMEM252 PF15664.5 CTQ28372.1 - 0.082 12.6 0.2 0.16 11.7 0.2 1.4 1 0 0 1 1 1 0 Transmembrane protein 252 family DUF2474 PF10617.9 CTQ28373.1 - 6.1e-17 61.2 9.8 6.5e-17 61.1 9.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2474) DUF2554 PF10829.8 CTQ28375.1 - 3.3e-27 94.7 1.5 3.5e-27 94.6 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2554) Peptidase_U32 PF01136.19 CTQ28376.1 - 1.2e-73 247.1 0.1 5.3e-71 238.5 0.0 2.2 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.8 CTQ28376.1 - 1e-18 67.9 0.0 2e-18 67.0 0.0 1.5 1 0 0 1 1 1 1 Collagenase HTH_3 PF01381.22 CTQ28377.1 - 5.4e-16 58.4 0.0 7.2e-16 58.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ28377.1 - 1e-10 41.8 0.0 1.8e-10 41.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 CTQ28377.1 - 5.1e-09 35.7 0.1 8.6e-09 35.0 0.1 1.3 1 0 0 1 1 1 1 Cupin domain HTH_19 PF12844.7 CTQ28377.1 - 2.7e-06 27.3 0.0 3.5e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 CTQ28377.1 - 4.3e-06 26.5 0.0 6.9e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 CTQ28377.1 - 0.00024 21.5 0.0 0.00033 21.0 0.0 1.2 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 CTQ28377.1 - 0.0017 18.3 0.1 0.0025 17.7 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 CTQ28377.1 - 0.066 13.2 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 HTH domain HTH_23 PF13384.6 CTQ28377.1 - 0.1 12.4 0.1 0.2 11.5 0.1 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_IclR PF09339.10 CTQ28377.1 - 0.13 12.1 0.1 0.26 11.1 0.1 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain BenE PF03594.13 CTQ28378.1 - 1.1e-139 465.4 52.2 1.3e-139 465.2 52.2 1.0 1 0 0 1 1 1 1 Benzoate membrane transport protein HTH_AraC PF00165.23 CTQ28379.1 - 3.9e-24 84.2 0.0 9.2e-11 41.6 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 CTQ28379.1 - 5.9e-23 80.9 1.3 1.2e-22 80.0 0.8 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 CTQ28379.1 - 0.0061 16.3 0.3 0.25 11.1 0.0 2.8 3 0 0 3 3 3 1 IclR helix-turn-helix domain EamA PF00892.20 CTQ28380.1 - 2.6e-26 92.4 40.5 1.1e-15 58.0 15.1 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF3313 PF11769.8 CTQ28381.1 - 4e-55 186.5 0.1 4.6e-55 186.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3313) TehB PF03848.14 CTQ28382.1 - 2.4e-97 324.0 0.0 2.7e-97 323.8 0.0 1.0 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_25 PF13649.6 CTQ28382.1 - 7.9e-13 48.9 0.0 1.1e-12 48.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ28382.1 - 5.4e-11 42.6 0.0 6.4e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ28382.1 - 4.5e-10 40.0 0.0 6.5e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ28382.1 - 6.6e-10 39.6 0.0 9.7e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ28382.1 - 1.7e-07 31.1 0.0 2.1e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ28382.1 - 4.8e-06 26.2 0.0 6.2e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 CTQ28382.1 - 0.0061 16.2 0.0 0.0084 15.7 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) TPMT PF05724.11 CTQ28382.1 - 0.011 15.5 0.0 0.03 14.0 0.0 1.6 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) SLAC1 PF03595.17 CTQ28383.1 - 1.2e-39 136.5 27.4 1.4e-39 136.3 27.4 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel FHIPEP PF00771.20 CTQ28383.1 - 0.12 10.8 0.2 0.17 10.3 0.2 1.1 1 0 0 1 1 1 0 FHIPEP family B_solenoid_ydck PF18836.1 CTQ28384.1 - 5.3e-19 67.2 25.1 4.9e-08 32.5 1.0 7.5 7 1 1 8 8 8 4 Beta solenoid repeat from YDCK Hexapep PF00132.24 CTQ28384.1 - 1.8e-07 30.6 2.5 2.7 7.8 0.1 5.7 4 1 0 5 5 5 3 Bacterial transferase hexapeptide (six repeats) Bactofilin PF04519.13 CTQ28384.1 - 7.7e-05 22.9 4.3 0.02 15.2 0.8 3.3 1 1 2 3 3 3 1 Polymer-forming cytoskeletal Fucokinase PF07959.12 CTQ28384.1 - 0.053 12.4 1.1 1 8.2 0.3 2.3 1 1 1 3 3 3 0 L-fucokinase DUF2572 PF10833.8 CTQ28384.1 - 0.14 11.9 0.2 0.35 10.6 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2572) Acetyltransf_3 PF13302.7 CTQ28385.1 - 1.4e-16 61.5 0.0 1.7e-16 61.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ28385.1 - 1.3e-09 38.3 0.0 1.7e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 CTQ28385.1 - 1.8e-08 34.7 0.1 2.5e-08 34.2 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 CTQ28385.1 - 0.0038 16.9 0.1 0.0075 16.0 0.1 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ28385.1 - 0.081 12.9 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain MdoG PF04349.12 CTQ28386.1 - 3.4e-181 603.3 0.0 4e-181 603.1 0.0 1.0 1 0 0 1 1 1 1 Periplasmic glucan biosynthesis protein, MdoG TAT_signal PF10518.9 CTQ28386.1 - 0.00025 20.7 2.1 0.00053 19.7 2.1 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence EpoR_lig-bind PF09067.10 CTQ28386.1 - 0.17 12.1 0.2 1.9 8.7 0.0 2.3 2 0 0 2 2 2 0 Erythropoietin receptor, ligand binding ADH_zinc_N PF00107.26 CTQ28387.1 - 1.2e-23 83.5 3.1 1.9e-23 82.9 3.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 CTQ28387.1 - 2.3e-23 82.1 0.5 4.3e-23 81.3 0.5 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 CTQ28387.1 - 1.5e-10 40.9 1.1 2.2e-10 40.4 1.1 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 CTQ28387.1 - 4.5e-06 27.7 0.2 8.6e-06 26.8 0.2 1.5 1 1 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 CTQ28387.1 - 0.036 13.3 5.0 0.064 12.6 5.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain MTS PF05175.14 CTQ28387.1 - 0.063 12.8 0.5 0.14 11.7 0.5 1.6 1 1 0 1 1 1 0 Methyltransferase small domain Methyltransf_25 PF13649.6 CTQ28387.1 - 0.12 13.1 0.1 0.38 11.5 0.1 1.9 1 0 0 1 1 1 0 Methyltransferase domain COesterase PF00135.28 CTQ28388.1 - 2.9e-102 343.2 0.0 1.3e-88 298.1 0.0 2.0 2 0 0 2 2 2 2 Carboxylesterase family Abhydrolase_3 PF07859.13 CTQ28388.1 - 1.2e-10 41.6 0.9 1.9e-09 37.7 0.9 2.5 2 1 0 2 2 2 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 CTQ28388.1 - 0.0023 17.5 0.0 0.0045 16.5 0.0 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family Say1_Mug180 PF10340.9 CTQ28388.1 - 0.08 11.8 0.1 0.68 8.7 0.1 1.9 1 1 0 1 1 1 0 Steryl acetyl hydrolase HgmA PF04209.13 CTQ28388.1 - 0.13 11.0 0.2 0.19 10.4 0.2 1.1 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase DUF1338 PF07063.13 CTQ28389.1 - 3.6e-120 401.0 0.2 4.2e-120 400.8 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1338) VEK-30 PF12107.8 CTQ28389.1 - 0.28 11.1 0.2 0.28 11.1 0.2 2.3 2 0 0 2 2 2 0 Plasminogen (Pg) ligand in fibrinolytic pathway Dioxygenase_C PF00775.21 CTQ28390.1 - 1.9e-55 187.1 0.0 2.4e-55 186.8 0.0 1.1 1 0 0 1 1 1 1 Dioxygenase PCDO_beta_N PF12391.8 CTQ28390.1 - 1.4e-15 56.6 1.5 2.7e-15 55.7 1.5 1.5 1 0 0 1 1 1 1 Protocatechuate 3,4-dioxygenase beta subunit N terminal CarboxypepD_reg PF13620.6 CTQ28390.1 - 8e-06 26.0 0.0 3.4e-05 24.0 0.0 2.0 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain DUF4198 PF10670.9 CTQ28390.1 - 0.22 11.8 0.0 0.37 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4198) MTHFR PF02219.17 CTQ28390.1 - 0.24 10.7 0.0 0.33 10.2 0.0 1.1 1 0 0 1 1 1 0 Methylenetetrahydrofolate reductase Dioxygenase_C PF00775.21 CTQ28391.1 - 3.1e-20 72.4 0.0 2.5e-19 69.4 0.0 1.9 1 1 0 1 1 1 1 Dioxygenase LysR_substrate PF03466.20 CTQ28392.1 - 3e-34 118.2 0.0 4.5e-34 117.6 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28392.1 - 1.5e-18 66.5 4.7 1.6e-18 66.4 3.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_20 PF12840.7 CTQ28392.1 - 0.013 15.5 0.4 0.21 11.7 0.2 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_30 PF13556.6 CTQ28392.1 - 0.11 12.4 0.6 0.2 11.5 0.6 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain PQQ PF01011.21 CTQ28393.1 - 5.9e-39 130.2 1.0 1.2e-06 28.1 0.0 7.7 7 0 0 7 7 7 6 PQQ enzyme repeat PQQ_2 PF13360.6 CTQ28393.1 - 6.2e-22 78.3 1.0 6.1e-06 26.0 0.0 4.4 2 1 2 4 4 4 4 PQQ-like domain PQQ_3 PF13570.6 CTQ28393.1 - 7.3e-07 29.5 30.5 0.3 11.6 0.0 9.5 8 4 0 8 8 8 3 PQQ-like domain O-antigen_lig PF13425.6 CTQ28393.1 - 1.4 7.6 3.9 2.1 7.1 3.9 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein ADH_N PF08240.12 CTQ28394.1 - 9.5e-26 89.8 1.6 9.5e-26 89.8 1.6 2.0 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 CTQ28394.1 - 4.4e-23 81.7 0.3 7.6e-23 80.9 0.3 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 CTQ28394.1 - 2.3e-07 31.9 0.0 5.2e-07 30.8 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 CTQ28394.1 - 6.9e-05 22.4 0.0 0.00014 21.5 0.0 1.5 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus MinC_C PF03775.16 CTQ28394.1 - 0.0021 18.0 1.4 0.2 11.7 0.5 2.2 2 0 0 2 2 2 1 Septum formation inhibitor MinC, C-terminal domain 2-Hacid_dh_C PF02826.19 CTQ28394.1 - 0.033 13.6 0.1 0.055 12.8 0.1 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Met_10 PF02475.16 CTQ28394.1 - 0.068 12.9 0.1 0.11 12.2 0.1 1.4 1 0 0 1 1 1 0 Met-10+ like-protein CLLAC PF15675.5 CTQ28394.1 - 1.5 8.4 3.5 2.7 7.6 3.5 1.3 1 0 0 1 1 1 0 CLLAC-motif containing domain Trns_repr_metal PF02583.17 CTQ28395.1 - 2.5e-19 69.4 0.5 2.8e-19 69.3 0.5 1.0 1 0 0 1 1 1 1 Metal-sensitive transcriptional repressor Ni_hydr_CYTB PF01292.20 CTQ28396.1 - 1.5e-22 80.1 14.0 1.7e-22 79.9 14.0 1.0 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 CTQ28396.1 - 0.001 19.5 7.3 0.0069 16.9 1.4 2.6 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) Cytochrom_B561 PF03188.16 CTQ28396.1 - 0.041 14.0 6.7 0.15 12.2 0.5 2.6 2 1 0 2 2 2 0 Eukaryotic cytochrome b561 NapE PF06796.11 CTQ28398.1 - 0.029 13.9 0.9 0.05 13.1 0.9 1.4 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE DUF2070 PF09843.9 CTQ28398.1 - 0.78 7.9 3.5 0.77 8.0 3.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) HxlR PF01638.17 CTQ28399.1 - 3e-19 68.7 0.0 4e-19 68.2 0.0 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 CTQ28399.1 - 0.13 12.3 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix MFS_1 PF07690.16 CTQ28400.1 - 3.5e-31 108.4 85.0 4.1e-25 88.5 43.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ28400.1 - 0.071 12.4 43.1 0.38 10.0 43.1 2.0 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB A_deaminase PF00962.22 CTQ28401.1 - 1e-100 337.3 0.0 1.2e-100 337.1 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase GFO_IDH_MocA PF01408.22 CTQ28402.1 - 1.1e-24 87.6 0.0 1.5e-24 87.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 CTQ28402.1 - 2.1e-16 60.0 0.0 3.4e-16 59.3 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 CTQ28402.1 - 0.00025 21.7 0.0 0.00051 20.7 0.0 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 CTQ28402.1 - 0.0034 17.8 0.0 0.0063 16.9 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Glyco_hydro_1 PF00232.18 CTQ28403.1 - 7.2e-173 575.2 0.0 8.1e-173 575.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 HHA PF05321.11 CTQ28404.1 - 5.1e-28 97.2 0.0 6.7e-28 96.8 0.0 1.2 1 0 0 1 1 1 1 Haemolysin expression modulating protein NAD_synthase PF02540.17 CTQ28404.1 - 0.034 13.3 0.5 0.04 13.0 0.5 1.1 1 0 0 1 1 1 0 NAD synthase DUF2569 PF10754.9 CTQ28405.1 - 8.3e-40 136.5 14.7 9.2e-40 136.4 14.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2569) DUF2070 PF09843.9 CTQ28405.1 - 4.4 5.5 11.2 5 5.3 11.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Rnf-Nqr PF02508.14 CTQ28406.1 - 3.1e-60 203.1 23.5 3.5e-60 202.9 23.5 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein Fer4_21 PF14697.6 CTQ28407.1 - 3.3e-16 59.2 15.6 3.3e-16 59.2 15.6 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain FeS PF04060.13 CTQ28407.1 - 5e-12 45.3 3.6 5e-12 45.3 3.6 2.2 3 0 0 3 3 1 1 Putative Fe-S cluster Fer4 PF00037.27 CTQ28407.1 - 1.1e-10 40.8 25.5 4.3e-06 26.3 7.3 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 CTQ28407.1 - 7.2e-09 35.7 32.1 1e-06 28.8 15.1 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 CTQ28407.1 - 3.2e-08 34.0 17.2 0.00024 21.6 1.1 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ28407.1 - 5.2e-07 29.5 27.2 1.1e-05 25.3 5.3 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 CTQ28407.1 - 6.1e-07 30.3 19.0 0.0002 22.2 2.5 2.9 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 CTQ28407.1 - 9.7e-06 25.4 21.3 0.00019 21.3 2.8 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 CTQ28407.1 - 9.7e-06 25.6 15.4 9.7e-06 25.6 15.4 3.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 CTQ28407.1 - 0.0067 17.3 4.7 0.0067 17.3 4.7 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_4 PF12800.7 CTQ28407.1 - 0.0094 16.4 21.1 0.13 12.9 3.0 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_22 PF17179.4 CTQ28407.1 - 0.032 15.1 0.4 0.032 15.1 0.4 2.6 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 CTQ28407.1 - 0.12 13.2 17.3 0.56 11.0 3.8 3.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_17 PF13534.6 CTQ28407.1 - 0.29 11.7 23.6 0.32 11.6 3.6 3.1 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 CTQ28407.1 - 1.8 8.8 15.1 2.5 8.3 3.5 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Complex1_51K PF01512.17 CTQ28408.1 - 3.4e-46 156.9 1.6 4.5e-46 156.5 0.0 2.1 2 0 0 2 2 2 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit RnfC_N PF13375.6 CTQ28408.1 - 4e-33 113.4 0.0 9.6e-33 112.2 0.0 1.7 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain SLBB PF10531.9 CTQ28408.1 - 3.1e-13 49.3 0.2 7.4e-13 48.2 0.2 1.7 1 0 0 1 1 1 1 SLBB domain Fer4_7 PF12838.7 CTQ28408.1 - 8.1e-09 35.9 7.6 2.5e-08 34.4 7.6 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 CTQ28408.1 - 2.8e-08 33.2 13.8 0.0002 21.1 3.5 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 CTQ28408.1 - 6.9e-08 32.5 9.8 2.9e-07 30.5 10.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ28408.1 - 2.1e-06 27.8 10.0 7.9e-06 26.0 10.0 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ28408.1 - 4e-06 27.2 19.5 1.2e-05 25.6 9.0 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 CTQ28408.1 - 5.9e-06 26.1 14.9 0.0049 16.9 3.1 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 CTQ28408.1 - 1.3e-05 26.0 12.2 0.014 16.3 1.9 3.5 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 CTQ28408.1 - 1.4e-05 25.5 11.2 0.0002 21.8 10.2 2.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ28408.1 - 2.4e-05 24.5 8.7 0.037 14.5 0.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 CTQ28408.1 - 0.00017 21.6 6.7 0.00057 20.0 6.7 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain NQRA PF05896.11 CTQ28408.1 - 0.00019 21.0 0.0 0.00046 19.7 0.0 1.6 1 1 0 1 1 1 1 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Fer4_6 PF12837.7 CTQ28408.1 - 0.00055 19.9 15.4 0.026 14.6 3.2 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 CTQ28408.1 - 0.00075 19.7 9.3 0.0062 16.7 0.6 3.0 1 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 CTQ28408.1 - 0.0022 18.8 5.0 0.13 13.2 0.6 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 CTQ28408.1 - 0.0056 17.2 13.3 0.04 14.5 0.9 3.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I NQRA_SLBB PF11973.8 CTQ28408.1 - 0.02 15.5 0.0 0.051 14.2 0.0 1.7 1 0 0 1 1 1 0 NQRA C-terminal domain Fer4_3 PF12798.7 CTQ28408.1 - 0.033 15.1 19.3 0.066 14.2 3.7 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain NQR2_RnfD_RnfE PF03116.15 CTQ28409.1 - 5.3e-107 357.6 17.3 6e-107 357.4 17.3 1.0 1 0 0 1 1 1 1 NQR2, RnfD, RnfE family FMN_bind PF04205.14 CTQ28410.1 - 7.1e-19 68.2 0.1 1.4e-18 67.3 0.1 1.5 1 0 0 1 1 1 1 FMN-binding domain Acetyltransf_7 PF13508.7 CTQ28410.1 - 0.094 13.2 0.0 0.17 12.3 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Rnf-Nqr PF02508.14 CTQ28411.1 - 9.4e-62 208.1 11.0 1.1e-61 207.9 11.0 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein HhH-GPD PF00730.25 CTQ28412.1 - 6.7e-19 68.3 0.0 9.9e-19 67.8 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 CTQ28412.1 - 1.5e-07 30.9 0.0 3.1e-07 29.9 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 CTQ28412.1 - 0.00029 21.1 3.8 0.00046 20.4 3.8 1.3 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III PTR2 PF00854.21 CTQ28414.1 - 1.1e-89 301.1 20.2 1.5e-89 300.7 20.2 1.1 1 0 0 1 1 1 1 POT family MFS_1 PF07690.16 CTQ28414.1 - 7.8e-18 64.5 54.5 7.8e-17 61.2 53.1 2.6 1 1 1 2 2 2 2 Major Facilitator Superfamily TMEM213 PF15192.6 CTQ28414.1 - 0.31 11.0 1.4 31 4.6 0.0 2.5 2 0 0 2 2 2 0 TMEM213 family GST_C PF00043.25 CTQ28415.1 - 3.8e-13 49.5 0.1 6e-13 48.8 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 CTQ28415.1 - 1.1e-10 41.6 0.0 3.3e-10 40.2 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 CTQ28415.1 - 7e-09 35.8 0.1 1.3e-08 34.9 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 CTQ28415.1 - 3.3e-08 33.7 0.0 7.1e-08 32.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 CTQ28415.1 - 6.3e-08 32.9 0.0 1.2e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 CTQ28415.1 - 7.5e-08 32.3 0.8 1.5e-07 31.3 0.8 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 CTQ28415.1 - 0.024 14.4 0.1 0.18 11.6 0.1 2.2 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Phos_pyr_kin PF08543.12 CTQ28416.1 - 1.5e-15 57.2 0.0 2e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 CTQ28416.1 - 2.5e-11 43.4 0.1 7.4e-11 41.9 0.1 1.8 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 CTQ28416.1 - 6.1e-05 22.6 0.1 0.00033 20.2 0.1 2.0 1 1 0 1 1 1 1 Carbohydrate kinase SsgA PF04686.12 CTQ28416.1 - 0.012 15.6 0.0 0.039 14.0 0.0 1.8 2 0 0 2 2 2 0 Streptomyces sporulation and cell division protein, SsgA tRNA-synt_1b PF00579.25 CTQ28417.1 - 1.7e-92 309.8 0.0 2.2e-92 309.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) S4 PF01479.25 CTQ28417.1 - 0.0001 22.0 0.0 0.00024 20.7 0.0 1.7 1 0 0 1 1 1 1 S4 domain Putative_PNPOx PF01243.20 CTQ28418.1 - 1.9e-24 85.7 0.0 2.6e-24 85.2 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase PNP_phzG_C PF10590.9 CTQ28418.1 - 1.2e-18 66.9 1.6 1.2e-18 66.9 1.6 2.1 2 0 0 2 2 2 1 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Pyrid_ox_like PF16242.5 CTQ28418.1 - 0.004 16.8 0.0 0.0077 15.8 0.0 1.4 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like ThuA PF06283.11 CTQ28418.1 - 0.057 13.6 0.0 0.084 13.1 0.0 1.2 1 0 0 1 1 1 0 Trehalose utilisation MliC PF09864.9 CTQ28419.1 - 1.5e-16 60.1 0.1 1.9e-16 59.8 0.1 1.2 1 0 0 1 1 1 1 Membrane-bound lysozyme-inhibitor of c-type lysozyme LPAM_1 PF08139.12 CTQ28419.1 - 0.92 10.1 3.5 16 6.2 3.5 2.2 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site AnmK PF03702.14 CTQ28420.1 - 1.2e-172 574.1 0.0 1.4e-172 573.9 0.0 1.0 1 0 0 1 1 1 1 Anhydro-N-acetylmuramic acid kinase FGGY_C PF02782.16 CTQ28420.1 - 0.1 12.3 0.1 0.24 11.1 0.1 1.6 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain Rick_17kDa_Anti PF05433.15 CTQ28421.1 - 7.7e-08 32.1 26.4 1.7e-07 31.0 26.4 1.6 1 0 0 1 1 1 1 Glycine zipper 2TM domain Gly-zipper_YMGG PF13441.6 CTQ28421.1 - 0.04 13.7 26.3 0.088 12.6 26.3 1.6 1 0 0 1 1 1 0 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 CTQ28421.1 - 0.04 13.9 26.1 0.13 12.2 25.6 2.1 1 1 1 2 2 2 0 Glycine zipper POR_N PF01855.19 CTQ28421.1 - 0.44 10.3 2.6 0.52 10.0 2.6 1.2 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DUF533 PF04391.12 CTQ28421.1 - 0.78 9.3 4.1 1.2 8.7 4.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF533) DUF2076 PF09849.9 CTQ28421.1 - 6.6 6.7 14.5 18 5.3 14.5 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Bacteriocin_IIc PF10439.9 CTQ28421.1 - 8.4 6.6 21.4 29 4.9 21.4 2.0 1 1 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Gly-zipper_OmpA PF13436.6 CTQ28421.1 - 8.8 6.2 28.8 1.8 8.4 11.1 2.6 1 1 1 2 2 2 0 Glycine-zipper domain MASE4 PF17158.4 CTQ28422.1 - 3.5e-73 245.8 37.6 3.5e-73 245.8 37.6 1.6 1 1 1 2 2 2 1 Membrane-associated sensor, integral membrane domain GGDEF PF00990.21 CTQ28422.1 - 4.5e-45 153.3 0.1 6.2e-45 152.8 0.1 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain MarR PF01047.22 CTQ28423.1 - 8e-19 67.3 1.3 1.5e-18 66.5 0.2 1.9 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 CTQ28423.1 - 4.4e-12 46.3 0.6 1.7e-11 44.5 0.1 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 CTQ28423.1 - 2.5e-11 43.3 0.2 5.7e-11 42.1 0.1 1.7 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 CTQ28423.1 - 3.9e-05 23.5 1.1 6.9e-05 22.8 0.3 1.9 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain B-block_TFIIIC PF04182.12 CTQ28423.1 - 0.00015 21.9 0.4 0.0035 17.5 0.1 2.2 2 0 0 2 2 2 1 B-block binding subunit of TFIIIC HxlR PF01638.17 CTQ28423.1 - 0.0015 18.3 1.0 0.0032 17.3 0.2 2.0 1 1 2 3 3 3 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 CTQ28423.1 - 0.0031 17.3 0.4 0.093 12.6 0.0 2.8 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 CTQ28423.1 - 0.0034 16.9 0.5 0.011 15.3 0.1 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 CTQ28423.1 - 0.0039 17.1 0.1 0.022 14.7 0.0 2.0 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 CTQ28423.1 - 0.01 15.8 0.6 0.061 13.3 0.0 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain Replic_Relax PF13814.6 CTQ28423.1 - 0.015 15.4 0.2 0.017 15.2 0.2 1.2 1 0 0 1 1 1 0 Replication-relaxation GntR PF00392.21 CTQ28423.1 - 0.016 14.8 1.0 0.033 13.9 0.0 2.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family DUF4423 PF14394.6 CTQ28423.1 - 0.022 14.5 0.6 0.27 10.9 0.1 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4423) HTH_20 PF12840.7 CTQ28423.1 - 0.025 14.6 0.5 0.13 12.3 0.0 2.3 3 0 0 3 3 3 0 Helix-turn-helix domain LexA_DNA_bind PF01726.16 CTQ28423.1 - 0.032 14.0 0.0 0.091 12.5 0.0 1.7 1 0 0 1 1 1 0 LexA DNA binding domain DUF4756 PF15948.5 CTQ28423.1 - 0.063 13.1 0.5 0.12 12.3 0.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4756) RsbU_N PF08673.10 CTQ28423.1 - 0.076 13.1 0.3 0.23 11.6 0.0 1.8 2 0 0 2 2 2 0 Phosphoserine phosphatase RsbU, N-terminal domain Fe_dep_repress PF01325.19 CTQ28423.1 - 0.1 12.8 0.0 0.22 11.8 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_1 PF00126.27 CTQ28423.1 - 0.15 12.0 0.9 0.93 9.5 0.1 2.7 2 1 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF1656 PF07869.12 CTQ28424.1 - 2e-12 46.9 6.4 2e-12 46.9 6.4 1.4 1 1 1 2 2 2 1 Protein of unknown function (DUF1656) Biotin_lipoyl_2 PF13533.6 CTQ28425.1 - 8e-17 60.8 9.8 1.6e-16 59.9 0.7 3.0 3 0 0 3 3 3 2 Biotin-lipoyl like HlyD_3 PF13437.6 CTQ28425.1 - 2.5e-16 60.3 0.8 6.1e-10 39.7 0.0 2.8 2 1 1 3 3 3 2 HlyD family secretion protein HlyD_D23 PF16576.5 CTQ28425.1 - 3e-15 56.0 6.3 6.7e-14 51.6 6.3 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 CTQ28425.1 - 2.9e-06 27.1 1.2 5.8e-06 26.1 1.2 1.6 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 CTQ28425.1 - 0.00015 21.5 0.4 0.84 9.5 0.1 2.7 3 0 0 3 3 3 2 Biotin-requiring enzyme HlyD_2 PF12700.7 CTQ28425.1 - 0.006 15.4 0.0 0.021 13.6 0.0 1.7 2 0 0 2 2 2 1 HlyD family secretion protein FUSC PF04632.12 CTQ28426.1 - 2.3e-165 551.8 39.0 2.6e-165 551.7 39.0 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family FUSC_2 PF13515.6 CTQ28426.1 - 6e-15 55.5 11.2 6e-15 55.5 11.2 2.8 2 1 0 2 2 2 1 Fusaric acid resistance protein-like ArAE_1 PF06081.11 CTQ28426.1 - 0.0063 16.7 4.7 0.0063 16.7 4.7 2.9 2 1 0 2 2 2 1 Aromatic acid exporter family member 1 Gemini_AL3 PF01407.17 CTQ28426.1 - 0.12 12.2 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Geminivirus AL3 protein ALMT PF11744.8 CTQ28426.1 - 2.3 6.9 5.0 4.6 5.9 5.0 1.4 1 0 0 1 1 1 0 Aluminium activated malate transporter Sod_Cu PF00080.20 CTQ28427.1 - 8e-29 100.6 0.6 9.4e-29 100.4 0.6 1.0 1 0 0 1 1 1 1 Copper/zinc superoxide dismutase (SODC) Aldo_ket_red PF00248.21 CTQ28428.1 - 4.4e-44 150.8 0.0 8.5e-44 149.9 0.0 1.4 1 1 0 1 1 1 1 Aldo/keto reductase family DUF1289 PF06945.13 CTQ28429.1 - 3e-20 71.7 7.1 3.7e-20 71.4 7.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1289) DUF2550 PF10739.9 CTQ28429.1 - 0.028 14.4 0.1 0.032 14.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2550) Flu_B_NS1 PF02942.14 CTQ28429.1 - 0.15 11.2 0.2 0.15 11.1 0.2 1.1 1 0 0 1 1 1 0 Influenza B non-structural protein (NS1) TetR_C_13 PF16925.5 CTQ28430.1 - 8.4e-13 48.3 0.0 1.3e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 CTQ28430.1 - 6.7e-11 41.8 0.0 1.1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family SPOC PF07744.13 CTQ28430.1 - 0.073 13.0 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 SPOC domain Oxidored_FMN PF00724.20 CTQ28431.1 - 1e-87 294.6 0.0 1.2e-87 294.4 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Glyoxalase PF00903.25 CTQ28432.1 - 4.8e-25 88.2 0.0 5.5e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 CTQ28432.1 - 1.3e-08 35.1 0.0 9.4e-08 32.3 0.0 1.9 1 1 1 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 CTQ28432.1 - 4.1e-06 27.5 0.0 7.3e-06 26.7 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain CppA_N PF14506.6 CTQ28432.1 - 0.0027 17.8 0.0 0.0035 17.4 0.0 1.4 1 0 0 1 1 1 1 CppA N-terminal Glyoxalase_2 PF12681.7 CTQ28432.1 - 0.018 14.9 0.0 0.043 13.7 0.0 1.6 1 1 0 1 1 1 0 Glyoxalase-like domain Glyoxalase_3 PF13468.6 CTQ28432.1 - 0.074 13.2 0.0 3 7.9 0.0 2.1 1 1 0 1 1 1 0 Glyoxalase-like domain RNase_T PF00929.24 CTQ28433.1 - 3.3e-38 131.8 0.0 3.8e-38 131.6 0.0 1.0 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 CTQ28433.1 - 1.2e-05 25.4 0.0 6.8e-05 22.9 0.0 1.8 1 1 0 1 1 1 1 3' exoribonuclease, RNase T-like Glutaredoxin PF00462.24 CTQ28434.1 - 7.1e-19 67.8 0.0 1.2e-18 67.1 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin NLPC_P60 PF00877.19 CTQ28435.1 - 9.9e-32 109.1 0.0 2.1e-31 108.0 0.0 1.6 1 0 0 1 1 1 1 NlpC/P60 family DUF1175 PF06672.11 CTQ28435.1 - 0.00011 22.0 0.0 0.15 11.7 0.0 2.6 1 1 1 2 2 2 2 Protein of unknown function (DUF1175) Peptidase_C92 PF05708.12 CTQ28435.1 - 0.0017 18.5 0.1 0.091 12.8 0.0 2.6 2 1 0 2 2 2 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Amidase_5 PF05382.13 CTQ28435.1 - 0.0061 16.5 0.0 0.014 15.3 0.0 1.6 1 1 0 1 1 1 1 Bacteriophage peptidoglycan hydrolase CHAP PF05257.16 CTQ28435.1 - 0.01 16.4 0.1 0.052 14.1 0.1 2.2 1 1 0 1 1 1 0 CHAP domain Amidase_6 PF12671.7 CTQ28435.1 - 0.029 14.5 0.0 0.061 13.4 0.0 1.5 1 0 0 1 1 1 0 Putative amidase domain LRAT PF04970.13 CTQ28435.1 - 1.2 9.5 0.0 1.2 9.5 0.0 2.2 2 1 0 2 2 2 0 Lecithin retinol acyltransferase DAG_kinase_N PF14513.6 CTQ28435.1 - 6.6 6.9 6.6 2.6 8.2 3.9 1.6 1 1 1 2 2 2 0 Diacylglycerol kinase N-terminus HTH_18 PF12833.7 CTQ28436.1 - 4.9e-18 65.2 0.9 7.1e-18 64.7 0.9 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ28436.1 - 2e-13 50.1 3.7 2.4e-08 33.9 0.5 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Sod_Fe_C PF02777.18 CTQ28437.1 - 1.2e-40 137.8 1.0 1.2e-39 134.6 0.1 2.5 3 0 0 3 3 3 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 CTQ28437.1 - 1.9e-35 121.2 0.7 3.1e-35 120.5 0.7 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain MFS_1 PF07690.16 CTQ28438.1 - 2e-32 112.5 42.9 2e-32 112.5 42.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ28438.1 - 1.5e-11 44.2 41.5 1.8e-11 44.0 41.5 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Sugar_tr PF00083.24 CTQ28438.1 - 1.1e-05 24.5 12.4 1.1e-05 24.5 12.4 2.6 2 1 0 2 2 2 1 Sugar (and other) transporter GPI2 PF06432.11 CTQ28438.1 - 5.1 6.5 8.4 2.2 7.7 4.2 2.3 1 1 1 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase Peripla_BP_3 PF13377.6 CTQ28439.1 - 9.8e-41 139.8 0.0 2.3e-40 138.7 0.0 1.5 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ28439.1 - 1.3e-34 119.9 0.0 1.6e-34 119.7 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 CTQ28439.1 - 1.1e-19 71.0 0.0 1.6e-19 70.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 CTQ28439.1 - 2.8e-19 68.6 0.7 5.8e-19 67.6 0.7 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family PucR PF07905.11 CTQ28439.1 - 0.011 16.0 0.0 0.026 14.8 0.0 1.6 1 1 0 1 1 1 0 Purine catabolism regulatory protein-like family HTH_Tnp_ISL3 PF13542.6 CTQ28439.1 - 0.023 14.1 0.4 0.062 12.7 0.4 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_3 PF01381.22 CTQ28439.1 - 0.04 14.0 0.1 0.15 12.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix HTH_24 PF13412.6 CTQ28439.1 - 0.065 12.8 0.3 1.1 8.8 0.1 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 CTQ28439.1 - 0.12 12.2 2.6 1 9.2 0.1 2.6 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_23 PF13384.6 CTQ28439.1 - 0.13 12.1 0.2 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 Homeodomain-like domain LysR_substrate PF03466.20 CTQ28440.1 - 1.2e-28 99.9 0.1 2.1e-28 99.1 0.1 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28440.1 - 2.7e-20 72.0 0.1 5.5e-20 71.1 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ28440.1 - 0.033 14.1 0.1 0.19 11.7 0.0 2.0 2 0 0 2 2 2 0 MarR family HTH_30 PF13556.6 CTQ28440.1 - 0.04 13.7 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain MFS_1 PF07690.16 CTQ28441.1 - 1.8e-42 145.5 43.6 1.8e-42 145.5 43.6 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28441.1 - 2.1e-11 43.4 2.6 2.1e-11 43.4 2.6 2.2 2 0 0 2 2 2 1 Sugar (and other) transporter MFS_2 PF13347.6 CTQ28441.1 - 4.3e-06 25.5 7.6 4.3e-06 25.5 7.6 2.7 1 1 1 2 2 2 1 MFS/sugar transport protein CMAS PF02353.20 CTQ28442.1 - 7.5e-102 340.3 0.3 1e-101 339.8 0.3 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 CTQ28442.1 - 3e-16 59.9 0.0 6e-16 58.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ28442.1 - 1.4e-15 57.5 0.0 2.2e-15 56.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ28442.1 - 1.7e-15 57.5 0.0 3.1e-15 56.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ28442.1 - 5.3e-10 39.3 0.0 1.1e-09 38.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ28442.1 - 4.6e-09 36.9 0.0 9.7e-09 35.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ28442.1 - 3.4e-06 26.7 0.0 5.8e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 CTQ28442.1 - 4.8e-05 23.2 0.0 7e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.12 CTQ28442.1 - 9.2e-05 22.1 0.1 0.00019 21.1 0.1 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW FtsJ PF01728.19 CTQ28442.1 - 0.00043 20.4 0.0 0.00088 19.4 0.0 1.5 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_32 PF13679.6 CTQ28442.1 - 0.00091 19.2 0.0 0.0014 18.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 CTQ28442.1 - 0.044 13.4 0.0 1.4 8.5 0.0 2.2 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) GCD14 PF08704.10 CTQ28442.1 - 0.049 13.3 0.0 0.076 12.7 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_PK PF05891.12 CTQ28442.1 - 0.072 12.6 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase RrnaAD PF00398.20 CTQ28442.1 - 0.091 11.8 0.0 0.16 11.0 0.0 1.4 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Lum_binding PF00677.17 CTQ28443.1 - 4e-47 158.1 2.4 4.8e-23 81.0 0.1 2.2 2 0 0 2 2 2 2 Lumazine binding domain MatE PF01554.18 CTQ28444.1 - 2.6e-74 248.3 27.8 2.1e-40 138.0 6.6 3.0 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.6 CTQ28444.1 - 3.8e-09 36.7 6.1 3.8e-09 36.7 6.1 4.9 3 2 2 5 5 5 2 Polysaccharide biosynthesis C-terminal domain DUF5389 PF17364.2 CTQ28444.1 - 0.0092 16.0 3.1 1.1 9.3 0.2 2.9 2 1 0 2 2 2 2 Family of unknown function (DUF5389) DUF2574 PF10836.8 CTQ28445.1 - 0.025 14.4 1.1 0.033 14.0 1.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2574) Spore_coat_CotO PF14153.6 CTQ28445.1 - 0.27 11.1 9.2 0.28 11.1 9.2 1.1 1 0 0 1 1 1 0 Spore coat protein CotO YbgS PF13985.6 CTQ28445.1 - 0.52 10.6 9.7 0.63 10.3 9.7 1.1 1 0 0 1 1 1 0 YbgS-like protein MMR1 PF08505.10 CTQ28445.1 - 0.65 10.2 5.5 0.71 10.1 5.5 1.0 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein Presenilin PF01080.17 CTQ28445.1 - 0.71 8.6 3.8 0.79 8.4 3.8 1.1 1 0 0 1 1 1 0 Presenilin Coilin_N PF15862.5 CTQ28445.1 - 1.5 8.7 6.2 1.9 8.3 6.2 1.3 1 0 0 1 1 1 0 Coilin N-terminus CCDC53 PF10152.9 CTQ28445.1 - 1.6 9.1 8.0 1.9 8.9 8.0 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex DUF2561 PF10812.8 CTQ28445.1 - 2.9 7.9 8.9 3.8 7.5 8.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2561) Kei1 PF08552.11 CTQ28445.1 - 3.9 7.3 7.0 5 6.9 7.0 1.2 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 RNA_pol_Rpc4 PF05132.14 CTQ28445.1 - 6.9 7.1 10.0 9 6.7 10.0 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 Lysine_decarbox PF03641.14 CTQ28446.1 - 4.4e-43 146.5 0.2 5.2e-43 146.3 0.2 1.1 1 0 0 1 1 1 1 Possible lysine decarboxylase LDcluster4 PF18306.1 CTQ28446.1 - 4.3e-17 62.1 0.9 5.5e-17 61.8 0.9 1.1 1 0 0 1 1 1 1 SLOG cluster4 family DUF1580 PF07618.11 CTQ28447.1 - 0.048 13.3 0.8 17 5.1 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1580) PSCyt2 PF07583.11 CTQ28447.1 - 0.056 13.4 0.0 0.61 10.0 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1549) QVR PF17064.5 CTQ28447.1 - 0.17 12.2 0.6 44 4.4 0.0 2.8 1 1 2 3 3 3 0 Sleepless protein LBR_tudor PF09465.10 CTQ28447.1 - 0.23 11.3 0.7 23 4.9 0.0 3.0 3 0 0 3 3 3 0 Lamin-B receptor of TUDOR domain Bee_toxin PF17454.2 CTQ28447.1 - 2.1 8.5 4.1 77 3.4 0.1 3.2 2 1 1 3 3 3 0 Honey bee toxin Phage_holin_3_6 PF07332.11 CTQ28448.1 - 0.56 10.3 4.2 0.71 9.9 4.2 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III LysR_substrate PF03466.20 CTQ28450.1 - 1.2e-26 93.4 2.5 1.9e-26 92.7 2.5 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28450.1 - 1.2e-17 63.6 3.4 2.3e-17 62.7 3.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Lactamase_B PF00753.27 CTQ28452.1 - 1.9e-26 93.3 1.8 4.3e-26 92.2 1.8 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 CTQ28452.1 - 4.5e-10 39.4 0.0 6.9e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 CTQ28452.1 - 3.6e-05 23.7 0.0 9.8e-05 22.3 0.0 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 CTQ28452.1 - 0.0013 18.2 0.0 0.003 17.0 0.0 1.6 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily domain CysA_C_terminal PF17850.1 CTQ28452.1 - 0.043 14.4 0.2 0.57 10.8 0.0 2.8 3 0 0 3 3 3 0 CysA C-terminal regulatory domain Trans_reg_C PF00486.28 CTQ28454.1 - 4.5e-09 36.3 0.1 9.7e-09 35.2 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal DUF4178 PF13785.6 CTQ28454.1 - 0.17 12.0 0.0 0.22 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4178) HTH_23 PF13384.6 CTQ28455.1 - 0.014 15.2 0.2 0.099 12.5 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain DUF2285 PF10074.9 CTQ28455.1 - 0.023 15.3 1.6 0.023 15.3 0.3 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2285) Fucokinase PF07959.12 CTQ28455.1 - 0.04 12.8 0.1 0.06 12.3 0.1 1.2 1 0 0 1 1 1 0 L-fucokinase DUF1471 PF07338.13 CTQ28456.1 - 4.5e-08 32.9 3.3 5.9e-08 32.6 3.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) PepSY_2 PF13670.6 CTQ28456.1 - 0.045 13.8 1.9 0.052 13.6 1.9 1.1 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain Pro_CA PF00484.19 CTQ28457.1 - 1.6e-47 161.7 0.0 1.9e-47 161.4 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase LysE PF01810.18 CTQ28458.1 - 4.1e-35 121.0 8.8 4.9e-35 120.7 8.8 1.1 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 CTQ28458.1 - 0.089 12.5 7.5 0.41 10.3 7.5 2.2 1 1 0 1 1 1 0 Integral membrane protein TerC family DeoRC PF00455.22 CTQ28459.1 - 1.5e-40 138.7 0.1 2e-40 138.4 0.1 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ28459.1 - 1.1e-14 53.9 0.0 2.1e-14 53.0 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ28459.1 - 2.6e-07 30.5 0.0 4.5e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_Mga PF08280.11 CTQ28459.1 - 5.5e-05 23.1 0.0 0.00011 22.2 0.0 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_AsnC-type PF13404.6 CTQ28459.1 - 0.00025 20.8 0.2 0.00054 19.7 0.2 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 CTQ28459.1 - 0.0031 17.6 0.1 0.006 16.6 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 CTQ28459.1 - 0.004 17.5 0.0 0.0092 16.3 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator GntR PF00392.21 CTQ28459.1 - 0.0047 16.6 0.1 0.011 15.4 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family Put_DNA-bind_N PF06971.13 CTQ28459.1 - 0.005 16.8 0.0 0.011 15.8 0.0 1.5 1 0 0 1 1 1 1 Putative DNA-binding protein N-terminus HTH_12 PF08461.10 CTQ28459.1 - 0.033 14.1 0.0 0.07 13.1 0.0 1.6 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_24 PF13412.6 CTQ28459.1 - 0.036 13.6 0.1 0.071 12.7 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Peptidase_C41 PF05417.11 CTQ28459.1 - 0.082 12.7 0.3 0.21 11.4 0.1 1.7 2 0 0 2 2 2 0 Hepatitis E cysteine protease MarR_2 PF12802.7 CTQ28459.1 - 0.12 12.2 0.1 0.26 11.2 0.1 1.5 1 0 0 1 1 1 0 MarR family FeoC PF09012.10 CTQ28459.1 - 0.12 12.4 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_32 PF13565.6 CTQ28459.1 - 0.13 12.9 0.2 0.26 11.9 0.2 1.5 1 0 0 1 1 1 0 Homeodomain-like domain Fe_dep_repress PF01325.19 CTQ28459.1 - 0.16 12.2 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Glyoxalase PF00903.25 CTQ28460.1 - 4.1e-08 33.5 0.0 5e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 CTQ28460.1 - 9.8e-05 23.1 0.0 0.00013 22.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 CTQ28460.1 - 0.00031 21.0 0.1 0.00058 20.1 0.1 1.4 1 1 1 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAT PF00302.18 CTQ28461.1 - 1.9e-21 76.9 0.0 2.3e-21 76.7 0.0 1.0 1 0 0 1 1 1 1 Chloramphenicol acetyltransferase 2-oxoacid_dh PF00198.23 CTQ28461.1 - 0.0067 15.9 0.0 1.1 8.6 0.0 2.2 2 0 0 2 2 2 2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SBP_bac_5 PF00496.22 CTQ28462.1 - 5e-80 269.3 2.3 6.3e-80 268.9 2.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 CTQ28463.1 - 5e-42 143.7 17.4 5.1e-42 143.7 9.7 2.2 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ28464.1 - 4.9e-27 94.9 6.5 1e-26 93.8 6.5 1.5 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ28464.1 - 3.5e-13 49.3 0.7 3.5e-13 49.3 0.7 3.3 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C DUF4731 PF15875.5 CTQ28464.1 - 0.015 15.5 0.0 0.041 14.1 0.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4731) BatA PF07584.11 CTQ28464.1 - 0.058 13.8 4.1 0.25 11.8 4.1 2.1 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal EMC3_TMCO1 PF01956.16 CTQ28464.1 - 1.7 8.4 5.5 7.3 6.3 0.0 2.8 3 1 0 3 3 3 0 Integral membrane protein EMC3/TMCO1-like ABC_tran PF00005.27 CTQ28465.1 - 1e-28 100.5 0.0 1.4e-28 100.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 CTQ28465.1 - 1.9e-19 69.9 0.2 3.6e-19 69.0 0.2 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 CTQ28465.1 - 0.00012 21.7 0.3 0.0018 17.7 0.3 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ28465.1 - 0.0015 18.8 0.2 0.015 15.6 0.2 2.1 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 CTQ28465.1 - 0.0023 17.3 0.1 0.056 12.8 0.1 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_21 PF13304.6 CTQ28465.1 - 0.0029 17.5 0.0 0.015 15.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ28465.1 - 0.022 15.1 0.2 0.042 14.2 0.2 1.7 1 1 0 1 1 1 0 AAA ATPase domain IstB_IS21 PF01695.17 CTQ28465.1 - 0.03 14.1 0.1 0.22 11.2 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 CTQ28465.1 - 0.035 13.6 0.0 0.063 12.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region ATP-synt_ab PF00006.25 CTQ28465.1 - 0.048 13.3 0.6 0.056 13.1 0.5 1.4 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Sigma54_activat PF00158.26 CTQ28465.1 - 0.056 13.2 0.5 0.31 10.7 0.0 2.0 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA PF00004.29 CTQ28465.1 - 0.087 13.2 0.1 0.2 12.1 0.0 1.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 CTQ28465.1 - 0.19 11.5 0.0 0.34 10.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 CTQ28466.1 - 1.5e-27 96.8 0.0 1.9e-27 96.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 CTQ28466.1 - 2.6e-19 69.5 0.9 4.2e-19 68.8 0.9 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 CTQ28466.1 - 3.2e-07 30.5 1.4 0.0019 18.0 0.0 2.7 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 CTQ28466.1 - 0.0023 18.2 0.6 0.011 16.0 0.6 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ28466.1 - 0.0036 17.7 0.0 0.0053 17.2 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ28466.1 - 0.09 12.5 0.2 0.17 11.6 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain PRK PF00485.18 CTQ28466.1 - 0.2 11.4 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family RcnB PF11776.8 CTQ28467.1 - 0.0002 21.4 0.1 0.00038 20.5 0.1 1.5 1 0 0 1 1 1 1 Nickel/cobalt transporter regulator DUF1236 PF06823.12 CTQ28467.1 - 0.0014 18.5 0.0 0.002 18.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1236) Collagen PF01391.18 CTQ28467.1 - 0.094 12.5 20.4 0.21 11.3 20.4 1.6 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) DinB PF05163.12 CTQ28468.1 - 3.7e-10 40.0 0.1 4.9e-10 39.6 0.1 1.2 1 0 0 1 1 1 1 DinB family DinB_2 PF12867.7 CTQ28468.1 - 2.4e-08 34.5 0.5 3e-08 34.2 0.5 1.1 1 0 0 1 1 1 1 DinB superfamily Condensin2nSMC PF12422.8 CTQ28469.1 - 0.17 12.0 0.0 3.2 7.9 0.0 2.0 1 1 1 2 2 2 0 Condensin II non structural maintenance of chromosomes subunit MFS_1 PF07690.16 CTQ28471.1 - 9.1e-42 143.2 53.3 9.1e-42 143.2 53.3 2.4 1 1 1 2 2 2 1 Major Facilitator Superfamily PMD PF10536.9 CTQ28471.1 - 0.2 10.8 0.4 0.28 10.3 0.4 1.2 1 0 0 1 1 1 0 Plant mobile domain LysR_substrate PF03466.20 CTQ28472.1 - 7.7e-51 172.4 0.5 9.7e-51 172.1 0.5 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28472.1 - 5.8e-17 61.4 2.2 5.8e-17 61.4 2.2 2.7 3 0 0 3 3 3 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ28472.1 - 0.068 13.1 0.4 0.22 11.5 0.1 2.0 2 0 0 2 2 2 0 MarR family HTH_AsnC-type PF13404.6 CTQ28472.1 - 0.14 12.0 0.2 0.39 10.6 0.2 1.8 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain DIOX_N PF14226.6 CTQ28473.1 - 3.6e-19 69.6 0.0 6.3e-19 68.9 0.0 1.4 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal 2OG-FeII_Oxy PF03171.20 CTQ28473.1 - 5.2e-19 68.6 0.0 8.4e-19 67.9 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Amidohydro_1 PF01979.20 CTQ28474.1 - 2.1e-42 145.7 0.0 2.6e-42 145.4 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 CTQ28474.1 - 1.5e-09 37.9 5.2 4.5e-08 33.0 2.8 2.5 1 1 1 2 2 2 2 Amidohydrolase family NMT1 PF09084.11 CTQ28475.1 - 2.6e-24 86.4 0.0 3.8e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like DUF3875 PF12991.7 CTQ28475.1 - 0.18 11.8 0.0 0.36 10.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3875) LysR_substrate PF03466.20 CTQ28476.1 - 7.6e-38 130.0 0.0 1e-37 129.5 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28476.1 - 4.4e-17 61.8 3.3 6.1e-17 61.3 0.5 2.5 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_50 PF18024.1 CTQ28476.1 - 0.16 11.6 0.1 0.41 10.3 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Fer2 PF00111.27 CTQ28477.1 - 3.4e-10 39.7 2.5 5.9e-10 39.0 2.5 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_1 PF00175.21 CTQ28477.1 - 8.2e-05 23.2 0.0 0.00026 21.6 0.0 1.9 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 CTQ28477.1 - 0.00052 20.3 0.0 0.0027 18.0 0.0 2.1 3 0 0 3 3 3 1 Oxidoreductase FAD-binding domain Fer2_4 PF13510.6 CTQ28477.1 - 0.0015 18.6 0.2 0.0038 17.2 0.2 1.7 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 CTQ28477.1 - 0.01 15.8 0.3 0.023 14.7 0.1 1.7 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain NAD_binding_6 PF08030.12 CTQ28477.1 - 0.017 15.3 0.5 3.4 7.8 0.2 2.5 1 1 1 2 2 2 0 Ferric reductase NAD binding domain Amidohydro_3 PF07969.11 CTQ28478.1 - 5.6e-15 55.8 6.4 5.3e-09 36.1 3.3 2.4 1 1 1 2 2 2 2 Amidohydrolase family Ribonuc_L-PSP PF01042.21 CTQ28479.1 - 1.4e-15 57.3 0.0 4e-13 49.5 0.0 2.1 1 1 0 1 1 1 1 Endoribonuclease L-PSP Creatininase PF02633.14 CTQ28480.1 - 6.4e-68 228.8 0.0 8e-68 228.5 0.0 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase NMT1 PF09084.11 CTQ28481.1 - 2.4e-26 93.0 0.1 8.7e-26 91.2 0.0 1.9 2 2 0 2 2 2 1 NMT1/THI5 like Phosphonate-bd PF12974.7 CTQ28481.1 - 0.026 14.1 0.0 0.04 13.5 0.0 1.2 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein ABC_tran PF00005.27 CTQ28482.1 - 2.9e-31 108.8 0.0 4e-31 108.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 CTQ28482.1 - 0.00066 20.0 0.2 0.0032 17.7 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ28482.1 - 0.0017 18.8 0.0 0.003 18.0 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ28482.1 - 0.0042 16.8 0.1 0.0098 15.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ28482.1 - 0.0047 16.8 0.0 0.0085 16.0 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase Rad17 PF03215.15 CTQ28482.1 - 0.0095 15.9 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA PF00004.29 CTQ28482.1 - 0.021 15.3 0.0 0.079 13.4 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 CTQ28482.1 - 0.026 14.5 0.5 0.054 13.4 0.5 1.9 1 1 0 1 1 1 0 NACHT domain AAA_25 PF13481.6 CTQ28482.1 - 0.029 13.9 0.1 0.099 12.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 CTQ28482.1 - 0.034 14.5 0.0 0.28 11.6 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_21 PF13304.6 CTQ28482.1 - 0.042 13.7 0.0 0.25 11.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_5 PF07728.14 CTQ28482.1 - 0.045 13.8 0.1 0.16 12.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 CTQ28482.1 - 0.051 13.5 0.0 0.14 12.0 0.0 1.6 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_30 PF13604.6 CTQ28482.1 - 0.07 12.8 0.0 0.2 11.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 CTQ28482.1 - 0.16 11.3 0.1 0.4 10.0 0.0 1.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI NB-ARC PF00931.22 CTQ28482.1 - 0.17 11.1 0.1 0.32 10.2 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain SMC_N PF02463.19 CTQ28482.1 - 0.21 11.0 0.0 6.7 6.1 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain BPD_transp_1 PF00528.22 CTQ28483.1 - 6.1e-25 88.0 20.2 6.1e-25 88.0 20.2 2.2 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component FAD_binding_4 PF01565.23 CTQ28484.1 - 1.5e-26 92.8 0.2 6.5e-26 90.7 0.2 1.9 2 0 0 2 2 2 1 FAD binding domain FAD-oxidase_C PF02913.19 CTQ28484.1 - 0.026 14.2 0.0 0.063 12.9 0.0 1.7 1 0 0 1 1 1 0 FAD linked oxidases, C-terminal domain Formyl_trans_N PF00551.19 CTQ28484.1 - 0.07 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Formyl transferase DUF535 PF04393.13 CTQ28487.1 - 1.2e-43 149.4 0.0 1.5e-43 149.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF535) LysR_substrate PF03466.20 CTQ28490.1 - 2.8e-41 141.2 1.2 4.3e-41 140.6 1.2 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28490.1 - 3.4e-18 65.3 2.6 3.4e-18 65.3 2.6 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family PBP_like PF12727.7 CTQ28490.1 - 0.00024 20.3 0.0 0.038 13.1 0.0 2.2 1 1 1 2 2 2 2 PBP superfamily domain CoA_trans PF01144.23 CTQ28491.1 - 1e-74 250.6 0.1 1.2e-74 250.4 0.1 1.0 1 0 0 1 1 1 1 Coenzyme A transferase CoA_trans PF01144.23 CTQ28492.1 - 3.5e-40 137.7 1.5 3.9e-40 137.5 1.5 1.0 1 0 0 1 1 1 1 Coenzyme A transferase AcetylCoA_hyd_C PF13336.6 CTQ28492.1 - 7.1e-07 29.3 0.2 9.9e-07 28.8 0.2 1.3 1 0 0 1 1 1 1 Acetyl-CoA hydrolase/transferase C-terminal domain Thiolase_N PF00108.23 CTQ28493.1 - 8.2e-102 340.0 0.1 1.1e-101 339.6 0.1 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 CTQ28493.1 - 6.3e-51 171.2 0.9 1.1e-50 170.3 0.9 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 CTQ28493.1 - 1.6e-07 31.1 3.1 9.1e-07 28.7 0.5 3.0 3 0 0 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 CTQ28493.1 - 0.32 10.9 4.0 4.8 7.1 0.3 2.9 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 3HCDH_N PF02737.18 CTQ28494.1 - 3.4e-52 176.9 0.0 4.8e-52 176.4 0.0 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 CTQ28494.1 - 6.1e-19 68.4 0.0 1e-18 67.7 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.23 CTQ28494.1 - 1.1e-05 25.4 0.0 3.9e-05 23.7 0.0 1.9 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 CTQ28494.1 - 9e-05 22.7 0.0 0.0002 21.6 0.0 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 CTQ28494.1 - 0.0052 16.5 0.1 0.0092 15.6 0.1 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 CTQ28494.1 - 0.0067 15.7 0.0 0.011 15.0 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 CTQ28494.1 - 0.0071 16.9 0.0 0.014 15.9 0.0 1.7 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_8 PF13450.6 CTQ28494.1 - 0.0076 16.5 0.1 0.017 15.3 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 CTQ28494.1 - 0.0082 16.7 0.0 0.015 15.8 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 CTQ28494.1 - 0.011 15.3 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 CTQ28494.1 - 0.011 15.3 0.0 0.025 14.2 0.0 1.5 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIDA PF01134.22 CTQ28494.1 - 0.036 13.1 0.1 0.049 12.7 0.1 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A CbiA PF01656.23 CTQ28494.1 - 0.052 13.6 0.0 0.077 13.0 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Regnase_1_C PF18561.1 CTQ28494.1 - 0.079 12.7 0.1 2.3 8.0 0.0 2.7 2 0 0 2 2 2 0 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain AlaDh_PNT_C PF01262.21 CTQ28494.1 - 0.12 11.7 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DUF4131 PF13567.6 CTQ28495.1 - 0.14 11.8 0.1 0.14 11.8 0.1 4.1 4 1 1 5 5 5 0 Domain of unknown function (DUF4131) DUF3169 PF11368.8 CTQ28495.1 - 0.34 10.4 0.0 0.34 10.4 0.0 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF3169) adh_short_C2 PF13561.6 CTQ28496.1 - 1.3e-56 191.8 0.7 2.1e-56 191.1 0.7 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ28496.1 - 3.6e-52 176.7 0.5 4.5e-52 176.4 0.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ28496.1 - 3.5e-09 36.8 0.8 5.1e-09 36.3 0.8 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ28496.1 - 0.0078 15.7 0.2 0.022 14.2 0.2 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 CTQ28496.1 - 0.11 11.9 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) LysR_substrate PF03466.20 CTQ28497.1 - 2.3e-33 115.3 0.2 3.1e-33 114.9 0.2 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28497.1 - 6.7e-26 90.0 0.5 1.7e-25 88.7 0.5 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 CTQ28497.1 - 0.0049 16.4 0.0 0.011 15.3 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 CTQ28497.1 - 0.091 12.6 0.0 1.3 8.9 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_10 PF04967.12 CTQ28497.1 - 0.096 12.5 0.0 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain HTH_8 PF02954.19 CTQ28497.1 - 0.15 11.9 0.0 0.43 10.4 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family EFG_II PF14492.6 CTQ28497.1 - 0.17 12.0 0.0 0.36 10.9 0.0 1.5 1 0 0 1 1 1 0 Elongation Factor G, domain II AAL_decarboxy PF03306.13 CTQ28498.1 - 2.7e-85 285.2 0.1 3.1e-85 284.9 0.1 1.0 1 0 0 1 1 1 1 Alpha-acetolactate decarboxylase DUF3748 PF12566.8 CTQ28498.1 - 0.057 13.4 0.0 0.099 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3748) TPP_enzyme_N PF02776.18 CTQ28499.1 - 5.5e-53 179.1 2.1 4.6e-50 169.6 1.6 2.5 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 CTQ28499.1 - 2.5e-39 134.5 0.5 6.2e-39 133.2 0.1 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 CTQ28499.1 - 6.4e-31 106.9 0.0 4.5e-30 104.2 0.0 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 CTQ28499.1 - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit HTH_18 PF12833.7 CTQ28499.1 - 0.2 12.0 1.0 0.48 10.7 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain adh_short PF00106.25 CTQ28500.1 - 8.4e-63 211.4 2.7 9.9e-63 211.1 2.7 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ28500.1 - 5.7e-61 206.1 2.4 7.6e-61 205.6 2.4 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ28500.1 - 1.7e-13 50.9 0.9 2.3e-13 50.4 0.9 1.2 1 0 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 CTQ28500.1 - 0.00015 22.1 0.5 0.00027 21.2 0.5 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 3Beta_HSD PF01073.19 CTQ28500.1 - 0.0011 18.1 0.4 0.0014 17.7 0.4 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family 3HCDH_N PF02737.18 CTQ28500.1 - 0.015 15.2 1.6 0.025 14.4 1.6 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 CTQ28500.1 - 0.081 13.5 1.7 0.17 12.5 1.7 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Epimerase PF01370.21 CTQ28500.1 - 0.12 11.8 0.9 0.17 11.3 0.9 1.4 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Acetyltransf_3 PF13302.7 CTQ28501.1 - 6.5e-26 91.7 0.0 7.8e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ28501.1 - 2.3e-05 24.6 0.0 2.9e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family TPR_14 PF13428.6 CTQ28504.1 - 7.3e-05 23.3 14.6 0.28 12.1 0.5 5.1 1 1 3 4 4 4 3 Tetratricopeptide repeat ANAPC3 PF12895.7 CTQ28504.1 - 0.00036 20.7 0.0 0.00068 19.8 0.0 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 CTQ28504.1 - 0.005 16.9 0.5 0.27 11.4 0.0 3.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 CTQ28504.1 - 0.02 15.6 4.6 0.02 15.6 4.6 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 CTQ28504.1 - 0.02 15.5 1.5 0.79 10.5 0.1 3.8 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 CTQ28504.1 - 0.063 13.8 14.8 0.32 11.5 0.1 3.7 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_9 PF13371.6 CTQ28504.1 - 0.12 12.5 8.3 1.5 9.0 1.3 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat CcmH PF03918.14 CTQ28505.1 - 1.3e-53 180.1 0.1 1.6e-53 179.9 0.1 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein DUF3797 PF12677.7 CTQ28505.1 - 0.044 13.7 0.0 0.073 13.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) LT-IIB PF06453.11 CTQ28505.1 - 0.046 13.6 0.0 1.1 9.2 0.0 2.2 2 1 0 2 2 2 0 Type II heat-labile enterotoxin , B subunit (LT-IIB) zf-DNL PF05180.12 CTQ28505.1 - 0.066 13.2 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 DNL zinc finger CpXC PF14353.6 CTQ28505.1 - 0.069 13.2 0.0 0.096 12.7 0.0 1.3 1 0 0 1 1 1 0 CpXC protein DUF4381 PF14316.6 CTQ28505.1 - 0.12 12.6 1.3 9.1 6.5 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) HTH_38 PF13936.6 CTQ28505.1 - 0.12 12.1 0.4 0.33 10.7 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain CG-1 PF03859.16 CTQ28505.1 - 0.15 11.8 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 CG-1 domain DUF2092 PF09865.9 CTQ28505.1 - 0.2 11.0 3.1 3.1 7.1 0.1 2.1 1 1 1 2 2 2 0 Predicted periplasmic protein (DUF2092) Redoxin PF08534.10 CTQ28506.1 - 1.5e-24 86.3 0.0 1.9e-24 86.0 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 CTQ28506.1 - 5.3e-15 55.4 0.0 6.7e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_2 PF13098.6 CTQ28506.1 - 3.2e-05 24.3 0.0 4.8e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 CTQ28506.1 - 0.00047 20.4 0.0 0.00077 19.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 CTQ28506.1 - 0.0063 16.5 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 CTQ28506.1 - 0.018 15.2 0.0 0.03 14.5 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like CcmF_C PF16327.5 CTQ28507.1 - 1.4e-127 425.5 9.1 1.4e-127 425.5 9.1 2.7 3 1 0 3 3 3 1 Cytochrome c-type biogenesis protein CcmF C-terminal Cytochrom_C_asm PF01578.20 CTQ28507.1 - 8.7e-56 189.1 20.4 8.7e-56 189.1 20.4 2.6 2 1 0 2 2 2 1 Cytochrome C assembly protein DUF5313 PF17240.2 CTQ28507.1 - 0.49 10.8 3.9 1.7 9.1 3.9 1.9 1 0 0 1 1 1 0 Family of unknown function (DUF5313) DUF2339 PF10101.9 CTQ28507.1 - 2.1 6.8 70.9 2.4 6.6 11.8 2.3 1 1 0 2 2 2 0 Predicted membrane protein (DUF2339) CcmE PF03100.15 CTQ28508.1 - 8.9e-42 142.1 0.0 1e-41 141.9 0.0 1.0 1 0 0 1 1 1 1 CcmE DUF3951 PF13131.6 CTQ28508.1 - 0.072 13.3 0.2 0.33 11.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3951) CcmD PF04995.14 CTQ28509.1 - 2.1e-16 59.7 7.7 4.1e-16 58.8 7.7 1.5 1 0 0 1 1 1 1 Heme exporter protein D (CcmD) DUF5472 PF17566.2 CTQ28509.1 - 0.016 15.2 0.3 0.019 14.9 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5472) Cytochrom_C_asm PF01578.20 CTQ28510.1 - 6.2e-30 104.6 21.0 6.2e-30 104.6 21.0 1.4 2 0 0 2 2 2 1 Cytochrome C assembly protein CcmB PF03379.13 CTQ28511.1 - 5.5e-83 277.7 31.5 6.3e-83 277.5 31.5 1.0 1 0 0 1 1 1 1 CcmB protein ABC2_membrane PF01061.24 CTQ28511.1 - 0.00022 20.7 10.4 0.00022 20.7 10.4 1.9 1 1 1 2 2 2 1 ABC-2 type transporter BTP PF05232.12 CTQ28511.1 - 0.0093 16.0 1.7 0.0093 16.0 1.7 3.5 3 2 1 4 4 4 1 Chlorhexidine efflux transporter ABC_tran PF00005.27 CTQ28512.1 - 2.4e-27 96.1 0.0 3e-27 95.8 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28512.1 - 5.4e-12 46.1 0.1 6.9e-06 26.1 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28512.1 - 0.00026 20.5 0.0 0.047 13.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain Zeta_toxin PF06414.12 CTQ28512.1 - 0.049 12.9 0.1 0.74 9.1 0.1 2.1 2 0 0 2 2 2 0 Zeta toxin NACHT PF05729.12 CTQ28512.1 - 0.057 13.3 0.1 0.73 9.7 0.0 2.2 2 0 0 2 2 2 0 NACHT domain AAA_30 PF13604.6 CTQ28512.1 - 0.063 13.0 0.0 0.14 11.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 CTQ28512.1 - 0.077 13.5 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 AAA domain Roc PF08477.13 CTQ28512.1 - 0.096 12.9 0.0 3 8.1 0.0 2.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_25 PF13481.6 CTQ28512.1 - 0.1 12.2 2.1 5.7 6.5 2.1 2.6 1 1 0 1 1 1 0 AAA domain DUF3584 PF12128.8 CTQ28512.1 - 0.11 10.0 0.1 0.15 9.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) RsgA_GTPase PF03193.16 CTQ28512.1 - 0.23 11.4 0.0 0.35 10.8 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase Cytochrom_C PF00034.21 CTQ28513.1 - 5.8e-24 85.1 0.0 4.6e-10 40.5 0.0 3.6 3 1 0 3 3 3 3 Cytochrome c Cytochrome_CBB3 PF13442.6 CTQ28513.1 - 1.5e-23 82.9 0.3 1e-10 41.8 0.0 3.9 3 1 0 3 3 3 3 Cytochrome C oxidase, cbb3-type, subunit III Paired_CXXCH_1 PF09699.10 CTQ28513.1 - 6.3e-05 22.6 2.4 3.8 7.3 0.0 3.3 3 0 0 3 3 3 3 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_C7 PF14522.6 CTQ28513.1 - 0.00063 19.7 0.1 16 5.6 0.0 3.3 3 0 0 3 3 3 2 Cytochrome c7 and related cytochrome c DHOR PF06537.11 CTQ28513.1 - 0.021 13.5 0.1 0.59 8.7 0.0 2.6 3 0 0 3 3 3 0 Di-haem oxidoreductase, putative peroxidase Cytochrom_C550 PF14495.6 CTQ28513.1 - 0.049 13.3 1.5 6.8 6.4 0.0 3.9 4 1 1 5 5 5 0 Cytochrome c-550 domain PSCyt1 PF07635.11 CTQ28513.1 - 0.21 12.2 0.9 44 4.8 0.0 4.1 3 1 1 4 4 4 0 Planctomycete cytochrome C GSu_C4xC__C2xCH PF09698.10 CTQ28513.1 - 2.5 9.0 11.3 10 7.0 0.1 3.8 4 0 0 4 4 4 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) GMC_oxred_C PF05199.13 CTQ28514.1 - 4.1e-23 82.5 0.0 8.3e-23 81.5 0.0 1.5 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_N PF00732.19 CTQ28514.1 - 1.1e-08 34.9 0.0 4.6e-08 32.8 0.0 2.0 2 1 0 2 2 2 1 GMC oxidoreductase FAD_binding_3 PF01494.19 CTQ28514.1 - 0.0032 16.8 0.1 0.0091 15.3 0.0 1.8 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 CTQ28514.1 - 0.0059 15.9 0.1 0.62 9.2 0.0 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 CTQ28514.1 - 0.022 14.1 0.0 0.047 13.1 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 CTQ28514.1 - 0.029 14.0 0.0 0.06 12.9 0.0 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Pyr_redox PF00070.27 CTQ28514.1 - 0.037 14.6 1.8 1.6 9.4 0.7 2.9 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 CTQ28514.1 - 0.043 13.4 0.0 0.16 11.6 0.0 1.9 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Lycopene_cycl PF05834.12 CTQ28514.1 - 0.11 11.6 0.1 0.17 10.9 0.1 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein 3HCDH_N PF02737.18 CTQ28514.1 - 0.12 12.3 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 CTQ28514.1 - 0.16 11.7 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F420_oxidored PF03807.17 CTQ28514.1 - 0.17 12.5 0.0 0.47 11.1 0.0 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Gluconate_2-dh3 PF13618.6 CTQ28515.1 - 1.7e-38 131.9 0.1 2.9e-38 131.2 0.0 1.4 2 0 0 2 2 2 1 Gluconate 2-dehydrogenase subunit 3 Peptidase_C69 PF03577.15 CTQ28515.1 - 0.013 14.4 0.0 0.02 13.9 0.0 1.1 1 0 0 1 1 1 0 Peptidase family C69 UCR_Fe-S_N PF10399.9 CTQ28515.1 - 0.1 12.0 6.2 0.29 10.5 4.6 2.6 2 1 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DUF2164 PF09932.9 CTQ28515.1 - 0.13 12.3 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) Glyoxalase PF00903.25 CTQ28516.1 - 1.4e-08 34.9 0.0 1.7e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABC_tran PF00005.27 CTQ28517.1 - 3e-35 121.7 0.0 4.8e-35 121.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28517.1 - 2.4e-08 34.2 0.6 0.0041 17.0 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ28517.1 - 0.00028 21.3 0.1 0.00055 20.4 0.1 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ28517.1 - 0.00058 19.6 0.2 0.0016 18.2 0.2 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain TOBE_2 PF08402.10 CTQ28517.1 - 0.015 15.5 0.0 0.3 11.3 0.0 2.6 2 0 0 2 2 2 0 TOBE domain AAA_22 PF13401.6 CTQ28517.1 - 0.016 15.5 0.2 0.11 12.7 0.1 2.0 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 CTQ28517.1 - 0.018 15.0 0.2 0.066 13.1 0.0 1.8 2 0 0 2 2 2 0 NACHT domain cobW PF02492.19 CTQ28517.1 - 0.021 14.4 0.1 0.036 13.7 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 CTQ28517.1 - 0.025 14.3 0.4 0.044 13.5 0.4 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CTQ28517.1 - 0.03 14.5 0.1 0.06 13.5 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 CTQ28517.1 - 0.03 14.7 0.0 0.097 13.1 0.1 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 CTQ28517.1 - 0.031 14.2 0.1 0.054 13.4 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase SMC_N PF02463.19 CTQ28517.1 - 0.038 13.4 0.0 0.92 8.9 0.0 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CTQ28517.1 - 0.05 14.1 0.0 0.076 13.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CTQ28517.1 - 0.063 13.8 0.0 0.13 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ28517.1 - 0.075 12.6 0.2 0.16 11.5 0.2 1.5 1 0 0 1 1 1 0 AAA domain DLIC PF05783.11 CTQ28517.1 - 0.12 11.2 0.2 0.17 10.6 0.2 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_28 PF13521.6 CTQ28517.1 - 0.14 12.4 0.1 0.26 11.5 0.1 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 CTQ28517.1 - 0.17 11.9 0.1 0.31 11.0 0.1 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_ATPase PF09818.9 CTQ28517.1 - 0.19 10.5 0.7 7.6 5.2 0.2 2.4 2 1 0 2 2 2 0 Predicted ATPase of the ABC class NB-ARC PF00931.22 CTQ28517.1 - 0.21 10.7 0.3 0.34 10.1 0.3 1.2 1 0 0 1 1 1 0 NB-ARC domain BPD_transp_1 PF00528.22 CTQ28518.1 - 7.7e-22 77.9 35.1 5.1e-13 49.2 16.2 3.5 3 1 1 4 4 4 2 Binding-protein-dependent transport system inner membrane component Gas_vesicle PF00741.18 CTQ28518.1 - 0.02 15.0 0.6 0.092 12.9 0.6 2.2 1 0 0 1 1 1 0 Gas vesicle protein UPF0242 PF06785.11 CTQ28518.1 - 0.033 14.3 4.1 0.078 13.1 4.1 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus SBP_bac_8 PF13416.6 CTQ28519.1 - 4.8e-22 79.1 3.5 4.8e-22 79.1 3.5 1.5 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 CTQ28519.1 - 3.6e-16 59.6 1.0 5.9e-16 58.9 1.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ28519.1 - 1.1e-14 54.5 0.2 1.6e-14 53.9 0.2 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ28519.1 - 2.1e-13 50.9 8.4 2.9e-13 50.4 7.2 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Ldh_2 PF02615.14 CTQ28521.1 - 2.9e-108 362.0 2.8 3.3e-108 361.8 2.8 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase Molybdopterin PF00384.22 CTQ28522.1 - 6.2e-90 302.2 0.0 1.1e-89 301.3 0.0 1.4 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ28522.1 - 2.2e-30 105.0 0.0 4.2e-30 104.0 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 CTQ28522.1 - 7.8e-13 48.2 0.2 1.5e-12 47.3 0.2 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Peptidase_M20 PF01546.28 CTQ28523.1 - 4e-31 108.3 0.1 5.4e-31 107.9 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ28523.1 - 1.1e-13 51.0 0.0 2.6e-13 49.8 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 CTQ28523.1 - 0.11 12.2 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M28 MFS_1 PF07690.16 CTQ28525.1 - 3.9e-24 85.2 55.9 5.7e-17 61.7 24.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ28525.1 - 2.6e-09 36.9 35.4 4.3e-09 36.1 35.4 1.3 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 CTQ28525.1 - 0.027 13.3 24.5 0.24 10.2 6.8 2.3 1 1 1 2 2 2 0 MFS_1 like family Glyoxalase PF00903.25 CTQ28526.1 - 1.2e-14 54.6 0.4 1.7e-14 54.1 0.4 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 CTQ28526.1 - 0.0042 17.8 0.1 0.0059 17.4 0.1 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 CTQ28526.1 - 0.03 14.3 0.0 0.056 13.4 0.0 1.4 1 0 0 1 1 1 0 Glyoxalase-like domain MFS_1 PF07690.16 CTQ28528.1 - 1.2e-32 113.3 37.3 1.2e-32 113.3 37.3 1.6 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28528.1 - 5.3e-08 32.2 9.7 5.3e-08 32.2 9.7 2.3 2 1 0 2 2 2 1 Sugar (and other) transporter Glyoxalase PF00903.25 CTQ28529.1 - 1.6e-05 25.1 0.0 5e-05 23.5 0.0 1.7 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 CTQ28529.1 - 0.015 16.1 0.0 0.021 15.6 0.0 1.3 1 1 0 1 1 1 0 Glyoxalase-like domain DUF1062 PF06353.12 CTQ28530.1 - 1.5e-43 148.9 0.3 2e-43 148.4 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1062) zf-H2C2_5 PF13909.6 CTQ28530.1 - 0.037 13.8 3.3 0.1 12.3 3.3 1.8 1 0 0 1 1 1 0 C2H2-type zinc-finger domain zinc_ribbon_4 PF13717.6 CTQ28530.1 - 0.1 12.5 1.7 10 6.1 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain ABC_tran PF00005.27 CTQ28531.1 - 4e-35 121.3 0.0 5.1e-35 121.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28531.1 - 3.7e-12 46.7 0.0 2.4e-06 27.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28531.1 - 8.4e-09 35.2 0.1 4.5e-05 23.0 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ28531.1 - 1.8e-05 24.4 0.0 3.2e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ28531.1 - 0.00019 21.3 0.0 0.007 16.1 0.0 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 CTQ28531.1 - 0.00073 20.1 0.0 0.0011 19.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CTQ28531.1 - 0.001 18.8 0.0 0.0014 18.4 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ28531.1 - 0.0015 18.9 0.0 0.004 17.5 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 CTQ28531.1 - 0.0018 17.1 0.1 1.4 7.6 0.1 3.0 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_22 PF13401.6 CTQ28531.1 - 0.0025 18.1 0.0 0.0072 16.6 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.6 CTQ28531.1 - 0.0031 16.2 0.0 0.035 12.8 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_24 PF13479.6 CTQ28531.1 - 0.0075 16.0 0.0 0.014 15.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CTQ28531.1 - 0.008 16.3 0.1 0.013 15.6 0.1 1.7 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 CTQ28531.1 - 0.0083 16.1 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 CTQ28531.1 - 0.0099 15.8 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase IstB_IS21 PF01695.17 CTQ28531.1 - 0.019 14.7 0.0 0.035 13.8 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein PhoH PF02562.16 CTQ28531.1 - 0.02 14.4 0.0 0.039 13.4 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein NTPase_1 PF03266.15 CTQ28531.1 - 0.021 14.7 0.1 0.043 13.7 0.1 1.5 1 0 0 1 1 1 0 NTPase FtsK_SpoIIIE PF01580.18 CTQ28531.1 - 0.027 13.8 0.0 0.054 12.8 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family NACHT PF05729.12 CTQ28531.1 - 0.039 13.9 0.0 0.086 12.8 0.0 1.7 2 0 0 2 2 1 0 NACHT domain ATPase_2 PF01637.18 CTQ28531.1 - 0.048 13.6 0.0 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea cobW PF02492.19 CTQ28531.1 - 0.071 12.7 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SbcCD_C PF13558.6 CTQ28531.1 - 0.08 13.2 0.2 1.1 9.5 0.2 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_28 PF13521.6 CTQ28531.1 - 0.084 13.1 0.0 0.24 11.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 CTQ28531.1 - 0.085 13.4 0.2 0.19 12.3 0.2 1.6 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 CTQ28531.1 - 0.086 12.6 0.2 0.19 11.5 0.1 1.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA PF00004.29 CTQ28531.1 - 0.11 13.0 0.0 21 5.5 0.0 2.4 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 CTQ28531.1 - 0.11 12.8 0.1 0.15 12.4 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 CTQ28531.1 - 0.14 12.1 0.0 0.38 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) PRK PF00485.18 CTQ28531.1 - 0.15 11.8 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family CobU PF02283.16 CTQ28531.1 - 0.16 11.5 0.0 5.1 6.6 0.0 2.2 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase G-alpha PF00503.20 CTQ28531.1 - 0.25 10.4 0.0 0.3 10.2 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit BPD_transp_1 PF00528.22 CTQ28532.1 - 1.8e-23 83.2 6.8 1.8e-23 83.2 6.8 1.5 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2754 PF10953.8 CTQ28532.1 - 0.031 14.5 0.1 0.068 13.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) SBP_bac_3 PF00497.20 CTQ28533.1 - 3.6e-62 209.7 1.1 4.1e-62 209.5 1.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ28533.1 - 7.6e-12 45.5 0.1 3.8e-10 40.0 0.1 2.4 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 CTQ28533.1 - 0.0076 16.2 0.5 0.029 14.3 0.3 1.9 1 1 1 2 2 2 1 NMT1/THI5 like LTD PF00932.19 CTQ28533.1 - 0.019 15.3 0.0 0.1 12.9 0.0 2.1 1 1 0 1 1 1 0 Lamin Tail Domain SIS PF01380.22 CTQ28534.1 - 1.8e-11 44.0 0.0 2.9e-11 43.3 0.0 1.3 1 0 0 1 1 1 1 SIS domain HTH_6 PF01418.17 CTQ28534.1 - 1.4e-08 34.6 0.0 4.5e-08 33.0 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS_2 PF13580.6 CTQ28534.1 - 0.029 14.4 0.1 5.7 7.0 0.2 2.6 1 1 1 2 2 2 0 SIS domain Lactamase_B_2 PF12706.7 CTQ28534.1 - 0.093 12.2 0.0 0.38 10.3 0.0 1.8 2 0 0 2 2 2 0 Beta-lactamase superfamily domain Spo0A_C PF08769.11 CTQ28534.1 - 0.14 12.2 0.1 0.33 11.1 0.1 1.6 1 0 0 1 1 1 0 Sporulation initiation factor Spo0A C terminal DUF1318 PF07027.12 CTQ28534.1 - 0.15 12.5 0.7 1.4 9.4 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1318) Peripla_BP_2 PF01497.18 CTQ28535.1 - 1.7e-18 67.1 0.0 2.2e-18 66.7 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein YdaS_antitoxin PF15943.5 CTQ28535.1 - 0.061 13.2 0.0 0.17 11.8 0.0 1.7 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DUF4224 PF13986.6 CTQ28535.1 - 0.12 12.3 0.4 0.66 9.9 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) FecCD PF01032.18 CTQ28536.1 - 7.4e-80 268.3 34.5 9e-80 268.0 34.5 1.0 1 0 0 1 1 1 1 FecCD transport family FecCD PF01032.18 CTQ28537.1 - 4.1e-83 278.9 37.3 5e-83 278.7 37.3 1.0 1 0 0 1 1 1 1 FecCD transport family ABC_tran PF00005.27 CTQ28538.1 - 7.2e-29 101.0 0.0 9.9e-29 100.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28538.1 - 6.3e-10 39.3 0.2 7.9e-05 22.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28538.1 - 5e-07 29.4 0.0 0.023 14.1 0.1 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ28538.1 - 2.5e-05 23.9 0.3 5.1e-05 22.9 0.3 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.12 CTQ28538.1 - 4.9e-05 22.7 0.1 8.1e-05 22.0 0.1 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_16 PF13191.6 CTQ28538.1 - 0.00029 21.3 0.2 0.00092 19.6 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 CTQ28538.1 - 0.00035 20.4 0.0 0.002 17.9 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 CTQ28538.1 - 0.00056 19.7 0.0 0.0009 19.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 CTQ28538.1 - 0.0018 17.9 0.2 0.006 16.2 0.1 1.9 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 CTQ28538.1 - 0.0021 18.6 0.3 0.0034 17.9 0.3 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CTQ28538.1 - 0.0021 18.2 0.1 0.0078 16.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 CTQ28538.1 - 0.0026 16.6 0.4 0.2 10.4 0.4 2.2 2 0 0 2 2 2 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 CTQ28538.1 - 0.0095 15.9 0.1 0.015 15.2 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase NACHT PF05729.12 CTQ28538.1 - 0.014 15.3 0.6 0.026 14.4 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 CTQ28538.1 - 0.041 14.1 0.4 0.2 11.9 0.1 2.1 2 0 0 2 2 2 0 AAA domain APS_kinase PF01583.20 CTQ28538.1 - 0.05 13.5 0.1 0.077 12.9 0.1 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_27 PF13514.6 CTQ28538.1 - 0.07 12.7 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 CTQ28538.1 - 0.098 11.7 0.1 0.16 11.0 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NTPase_1 PF03266.15 CTQ28538.1 - 0.1 12.5 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 NTPase Mg_chelatase PF01078.21 CTQ28538.1 - 0.11 11.9 0.1 0.17 11.2 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI FtsK_SpoIIIE PF01580.18 CTQ28538.1 - 0.11 11.9 0.1 0.16 11.3 0.1 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_28 PF13521.6 CTQ28538.1 - 0.12 12.7 0.4 0.52 10.5 0.1 2.0 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 CTQ28538.1 - 0.14 11.7 0.8 0.29 10.7 0.5 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.17 CTQ28538.1 - 0.14 11.9 0.2 3.1 7.5 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_5 PF07728.14 CTQ28538.1 - 0.16 12.0 0.6 0.86 9.6 0.1 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 CTQ28538.1 - 0.18 11.5 0.1 0.37 10.5 0.1 1.9 2 1 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 CTQ28538.1 - 0.19 11.4 0.1 0.44 10.2 0.1 1.6 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_18 PF13238.6 CTQ28538.1 - 0.22 12.0 0.2 0.57 10.7 0.1 1.7 2 0 0 2 2 1 0 AAA domain AAA_14 PF13173.6 CTQ28538.1 - 0.23 11.5 0.1 0.56 10.2 0.1 1.7 2 0 0 2 2 2 0 AAA domain TonB_dep_Rec PF00593.24 CTQ28539.1 - 2.1e-62 212.5 30.1 2.1e-62 212.5 30.1 1.5 1 1 0 1 1 1 1 TonB dependent receptor Plug PF07715.15 CTQ28539.1 - 1.3e-14 54.7 0.3 4.8e-14 52.8 0.3 2.1 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain LRR_10 PF18805.1 CTQ28539.1 - 0.086 12.5 0.1 0.21 11.3 0.1 1.6 1 0 0 1 1 1 0 Leucine-rich repeat Laminin_G_2 PF02210.24 CTQ28539.1 - 0.095 13.3 0.1 0.27 11.8 0.1 1.8 1 0 0 1 1 1 0 Laminin G domain ABC_tran PF00005.27 CTQ28540.1 - 2.2e-32 112.5 0.0 3.1e-32 112.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28540.1 - 3.8e-05 23.6 0.1 0.012 15.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ28540.1 - 0.0001 22.7 0.9 0.00036 20.9 0.8 2.0 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ28540.1 - 0.00011 22.2 0.0 0.00041 20.3 0.0 1.9 3 0 0 3 3 3 1 RsgA GTPase AAA_22 PF13401.6 CTQ28540.1 - 0.00054 20.2 0.0 0.001 19.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ28540.1 - 0.0029 17.3 0.0 0.0081 15.9 0.0 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_33 PF13671.6 CTQ28540.1 - 0.0029 17.8 0.1 0.46 10.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 CTQ28540.1 - 0.0034 17.3 0.0 0.0058 16.6 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_28 PF13521.6 CTQ28540.1 - 0.0038 17.5 0.1 0.043 14.0 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 CTQ28540.1 - 0.024 14.6 0.1 0.055 13.5 0.1 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 CTQ28540.1 - 0.04 14.5 0.1 0.067 13.7 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ28540.1 - 0.047 13.3 0.0 0.11 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 CTQ28540.1 - 0.051 13.0 0.0 0.08 12.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NACHT PF05729.12 CTQ28540.1 - 0.055 13.4 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA PF00004.29 CTQ28540.1 - 0.062 13.7 0.0 0.13 12.7 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 CTQ28540.1 - 0.071 13.2 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase IstB_IS21 PF01695.17 CTQ28540.1 - 0.14 11.8 0.1 0.99 9.1 0.0 2.3 2 1 1 3 3 3 0 IstB-like ATP binding protein RNA_helicase PF00910.22 CTQ28540.1 - 0.19 12.1 0.0 0.45 10.9 0.0 1.6 2 0 0 2 2 1 0 RNA helicase BPD_transp_1 PF00528.22 CTQ28541.1 - 5.9e-14 52.2 18.0 5.9e-14 52.2 18.0 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component NMT1_2 PF13379.6 CTQ28542.1 - 5.9e-17 62.2 0.0 1.4e-16 60.9 0.0 1.5 1 1 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 CTQ28542.1 - 4.8e-16 59.4 0.0 6.9e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 CTQ28542.1 - 0.0053 16.4 0.0 0.022 14.4 0.0 1.9 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein TAT_signal PF10518.9 CTQ28542.1 - 0.013 15.3 0.2 0.013 15.3 0.2 2.2 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence VitK2_biosynth PF02621.14 CTQ28542.1 - 0.065 12.7 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 Menaquinone biosynthesis NMT1 PF09084.11 CTQ28543.1 - 8.1e-16 58.6 0.0 1.1e-15 58.1 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 CTQ28543.1 - 1.1e-13 51.5 1.0 1.6e-13 50.9 1.0 1.2 1 0 0 1 1 1 1 NMT1-like family Phosphonate-bd PF12974.7 CTQ28543.1 - 4.9e-13 49.2 0.1 1e-12 48.2 0.1 1.5 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 CTQ28543.1 - 1.4e-11 44.2 0.0 7.5e-08 32.1 0.0 2.3 1 1 1 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 NMT1_3 PF16868.5 CTQ28543.1 - 3.4e-05 23.4 0.0 6.4e-05 22.5 0.0 1.4 1 1 0 1 1 1 1 NMT1-like family Acyl-CoA_dh_2 PF08028.11 CTQ28544.1 - 3.7e-11 43.4 1.4 8.5e-11 42.3 0.1 2.2 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 CTQ28544.1 - 8.9e-10 38.7 0.0 1.6e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 CTQ28544.1 - 1e-09 38.8 0.3 2.9e-09 37.3 0.3 1.8 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 CTQ28544.1 - 7.4e-06 26.6 0.1 1.5e-05 25.6 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Bac_luciferase PF00296.20 CTQ28545.1 - 3.8e-73 246.7 7.4 4.9e-73 246.3 7.4 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase LysR_substrate PF03466.20 CTQ28546.1 - 2.1e-31 108.9 4.2 3.2e-31 108.3 4.2 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28546.1 - 1.3e-17 63.5 1.3 3.9e-17 61.9 1.3 1.9 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ28546.1 - 0.0018 18.1 0.9 0.0066 16.3 0.1 2.3 2 0 0 2 2 2 1 MarR family HTH_30 PF13556.6 CTQ28546.1 - 0.0045 16.8 0.7 0.013 15.3 0.7 1.8 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_50 PF18024.1 CTQ28546.1 - 0.0045 16.6 0.0 0.011 15.3 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_8 PF02954.19 CTQ28546.1 - 0.0073 16.1 0.2 0.023 14.5 0.2 1.9 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_24 PF13412.6 CTQ28546.1 - 0.017 14.7 0.1 0.051 13.1 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 CTQ28546.1 - 0.055 13.4 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 CTQ28546.1 - 0.093 12.9 0.0 0.25 11.5 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain NUMOD1 PF07453.13 CTQ28546.1 - 0.11 12.7 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 NUMOD1 domain Replic_Relax PF13814.6 CTQ28546.1 - 0.16 12.0 0.5 0.24 11.5 0.5 1.3 1 0 0 1 1 1 0 Replication-relaxation HTH_AsnC-type PF13404.6 CTQ28546.1 - 0.18 11.6 0.1 0.18 11.6 0.1 2.3 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain CDO_I PF05995.12 CTQ28547.1 - 2.4e-09 36.7 0.1 3.2e-09 36.3 0.1 1.2 1 0 0 1 1 1 1 Cysteine dioxygenase type I Peptidase_S3 PF00944.19 CTQ28547.1 - 0.066 13.0 0.0 4.3 7.1 0.0 2.1 2 0 0 2 2 2 0 Alphavirus core protein Rhodanese PF00581.20 CTQ28548.1 - 2.2e-36 124.6 0.0 1.6e-09 38.2 0.0 4.3 4 0 0 4 4 4 4 Rhodanese-like domain Cu-oxidase_4 PF02578.15 CTQ28549.1 - 9.1e-41 140.0 0.0 1.1e-40 139.6 0.0 1.0 1 0 0 1 1 1 1 Multi-copper polyphenol oxidoreductase laccase MFS_1 PF07690.16 CTQ28550.1 - 8.7e-37 126.9 76.8 1.2e-34 119.8 49.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28550.1 - 2.9e-16 59.4 14.2 2.9e-16 59.4 14.2 3.0 2 1 1 3 3 3 2 Sugar (and other) transporter MFS_4 PF06779.14 CTQ28550.1 - 1.3e-10 41.2 45.9 1.7e-10 40.7 45.9 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB P5-ATPase PF12409.8 CTQ28550.1 - 0.39 10.8 6.7 7.3 6.7 1.4 2.7 2 0 0 2 2 2 0 P5-type ATPase cation transporter HMGL-like PF00682.19 CTQ28551.1 - 2.6e-74 250.1 5.2 3.3e-74 249.8 5.2 1.1 1 0 0 1 1 1 1 HMGL-like DmpG_comm PF07836.11 CTQ28551.1 - 4.4e-31 106.2 0.3 1.1e-30 104.9 0.3 1.7 1 0 0 1 1 1 1 DmpG-like communication domain SOUL PF04832.12 CTQ28551.1 - 0.083 13.1 0.0 0.21 11.7 0.0 1.7 2 0 0 2 2 2 0 SOUL heme-binding protein Hydrolase_like PF13242.6 CTQ28551.1 - 1.5 8.9 4.7 14 5.8 0.1 4.0 5 1 1 6 6 6 0 HAD-hyrolase-like AcetDehyd-dimer PF09290.11 CTQ28552.1 - 6.9e-63 211.0 1.3 1.1e-62 210.3 1.3 1.3 1 0 0 1 1 1 1 Prokaryotic acetaldehyde dehydrogenase, dimerisation Semialdhyde_dh PF01118.24 CTQ28552.1 - 6e-14 52.5 0.2 4.9e-13 49.6 0.0 2.3 2 1 1 3 3 3 1 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.17 CTQ28552.1 - 0.0004 20.9 0.2 0.0012 19.4 0.2 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 CTQ28552.1 - 0.0031 18.3 0.1 0.0074 17.1 0.1 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 CTQ28552.1 - 0.091 12.1 0.6 0.21 10.9 0.1 1.8 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 CTQ28552.1 - 0.11 12.5 0.2 0.31 11.1 0.2 1.7 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_3 PF03447.16 CTQ28552.1 - 0.2 12.3 1.9 1.3 9.7 0.0 2.7 3 0 0 3 3 3 0 Homoserine dehydrogenase, NAD binding domain FAA_hydrolase PF01557.18 CTQ28553.1 - 8.8e-19 68.0 0.0 1.1e-18 67.7 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family FbpC_C_terminal PF17845.1 CTQ28553.1 - 0.11 12.7 0.2 0.37 10.9 0.1 1.9 2 0 0 2 2 2 0 FbpC C-terminal regulatory nucleotide binding domain Abhydrolase_1 PF00561.20 CTQ28554.1 - 8.7e-25 87.8 0.2 6.5e-15 55.5 0.2 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 CTQ28554.1 - 3.6e-22 80.0 0.2 4.2e-22 79.8 0.2 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 CTQ28554.1 - 1.2e-15 57.4 0.0 7.1e-15 54.9 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 CTQ28554.1 - 0.0033 16.2 0.0 0.0039 15.9 0.0 1.2 1 0 0 1 1 1 1 Ndr family FokI_N PF02981.15 CTQ28554.1 - 0.0042 17.3 0.0 0.0081 16.3 0.0 1.4 1 0 0 1 1 1 1 Restriction endonuclease FokI, recognition domain Esterase PF00756.20 CTQ28554.1 - 0.008 15.9 0.1 0.016 14.8 0.1 1.5 1 0 0 1 1 1 1 Putative esterase DUF1057 PF06342.12 CTQ28554.1 - 0.012 14.7 0.0 0.017 14.2 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Peptidase_S9 PF00326.21 CTQ28554.1 - 0.056 12.9 0.1 0.32 10.4 0.0 2.3 2 1 1 3 3 3 0 Prolyl oligopeptidase family Abhydrolase_4 PF08386.10 CTQ28554.1 - 0.071 13.2 0.0 0.21 11.7 0.0 1.8 2 0 0 2 2 2 0 TAP-like protein DUF915 PF06028.11 CTQ28554.1 - 0.091 12.1 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) DUF2048 PF09752.9 CTQ28554.1 - 0.11 11.6 0.2 1.2 8.1 0.2 2.0 2 0 0 2 2 2 0 Abhydrolase domain containing 18 LigB PF02900.18 CTQ28555.1 - 1.5e-81 273.4 0.0 1.8e-81 273.2 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase TrfA PF07042.11 CTQ28555.1 - 0.22 10.5 0.0 0.35 9.9 0.0 1.3 1 0 0 1 1 1 0 TrfA protein FAD_binding_3 PF01494.19 CTQ28556.1 - 1.9e-83 280.6 0.0 2.4e-83 280.3 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 CTQ28556.1 - 1.5e-05 24.4 0.0 0.0026 17.1 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ28556.1 - 7.6e-05 22.1 0.0 0.00076 18.8 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ28556.1 - 0.00041 19.2 0.4 0.0018 17.0 1.0 1.7 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.27 CTQ28556.1 - 0.00046 20.7 0.4 0.0011 19.5 0.3 1.7 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ28556.1 - 0.0017 18.5 0.1 0.004 17.4 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 CTQ28556.1 - 0.0058 16.3 1.3 0.047 13.3 0.4 2.5 3 0 0 3 3 3 1 FAD dependent oxidoreductase Thi4 PF01946.17 CTQ28556.1 - 0.0062 15.8 0.2 0.01 15.1 0.2 1.3 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 CTQ28556.1 - 0.018 14.1 0.6 0.045 12.8 0.3 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein 2-Hacid_dh_C PF02826.19 CTQ28556.1 - 0.037 13.4 0.0 0.25 10.7 0.1 2.2 3 0 0 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 CTQ28556.1 - 0.038 13.3 0.0 0.066 12.6 0.0 1.3 1 0 0 1 1 1 0 ThiF family UDPG_MGDP_dh_N PF03721.14 CTQ28556.1 - 0.065 12.8 0.3 0.1 12.2 0.3 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 CTQ28556.1 - 0.12 12.6 0.1 0.25 11.6 0.1 1.6 1 0 0 1 1 1 0 TrkA-N domain FAD_oxidored PF12831.7 CTQ28556.1 - 0.14 11.5 0.4 3.5 6.9 0.9 2.1 2 0 0 2 2 2 0 FAD dependent oxidoreductase IclR PF01614.18 CTQ28557.1 - 1.9e-13 50.4 0.2 3.1e-13 49.7 0.2 1.3 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 CTQ28557.1 - 2e-11 43.5 1.0 2e-11 43.5 1.0 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR PF01047.22 CTQ28557.1 - 1.1e-06 28.5 0.0 5.1e-06 26.3 0.0 2.1 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 CTQ28557.1 - 7.3e-06 25.8 0.7 1.9e-05 24.5 0.1 2.0 2 0 0 2 2 1 1 MarR family HTH_24 PF13412.6 CTQ28557.1 - 4.6e-05 22.9 0.0 9.1e-05 21.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 CTQ28557.1 - 9.2e-05 22.3 0.2 0.00066 19.6 0.1 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain GAF_2 PF13185.6 CTQ28557.1 - 0.00056 20.2 0.2 0.002 18.4 0.1 1.9 2 0 0 2 2 2 1 GAF domain TrmB PF01978.19 CTQ28557.1 - 0.0017 18.2 0.0 0.0059 16.5 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB GAF PF01590.26 CTQ28557.1 - 0.0024 18.5 0.1 0.0076 16.9 0.1 1.8 2 0 0 2 2 2 1 GAF domain HTH_29 PF13551.6 CTQ28557.1 - 0.0053 16.7 0.2 0.014 15.4 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn helix HTH_11 PF08279.12 CTQ28557.1 - 0.014 15.3 0.1 0.038 13.9 0.0 1.8 2 0 0 2 2 1 0 HTH domain DUF4194 PF13835.6 CTQ28557.1 - 0.027 14.2 0.7 3.7 7.3 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4194) HTH_23 PF13384.6 CTQ28557.1 - 0.042 13.7 0.1 0.48 10.3 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain HTH_28 PF13518.6 CTQ28557.1 - 0.043 13.9 0.0 0.14 12.3 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 CTQ28557.1 - 0.055 13.1 2.2 0.16 11.7 0.1 2.5 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 CTQ28557.1 - 0.058 13.7 0.0 0.36 11.2 0.0 2.3 2 0 0 2 2 2 0 Transcriptional regulator HTH_20 PF12840.7 CTQ28557.1 - 0.068 13.2 0.6 0.26 11.4 0.2 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_36 PF13730.6 CTQ28557.1 - 0.092 12.7 0.0 0.2 11.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Peripla_BP_2 PF01497.18 CTQ28558.1 - 1.9e-29 102.9 0.5 2.5e-29 102.5 0.5 1.2 1 0 0 1 1 1 1 Periplasmic binding protein KdpD PF02702.17 CTQ28558.1 - 0.027 13.9 0.0 1.5 8.2 0.0 2.2 2 0 0 2 2 2 0 Osmosensitive K+ channel His kinase sensor domain FecCD PF01032.18 CTQ28559.1 - 1.1e-86 290.8 34.1 1.3e-86 290.5 34.1 1.0 1 0 0 1 1 1 1 FecCD transport family ABC2_membrane_3 PF12698.7 CTQ28559.1 - 0.094 11.8 8.4 0.14 11.3 8.4 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.27 CTQ28560.1 - 4.3e-22 79.1 0.0 6.7e-22 78.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28560.1 - 1.1e-11 45.1 0.1 2.2e-07 31.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28560.1 - 9e-06 25.3 0.2 0.034 13.6 0.2 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ28560.1 - 8e-05 22.3 0.0 0.00017 21.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ28560.1 - 0.015 15.0 0.1 0.98 9.1 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_23 PF13476.6 CTQ28560.1 - 0.11 13.0 0.1 0.16 12.4 0.1 1.2 1 0 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 CTQ28560.1 - 0.17 10.7 0.2 6.9 5.3 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class SBP_bac_11 PF13531.6 CTQ28561.1 - 2.9e-42 145.0 0.1 3.3e-42 144.8 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF1027 PF06265.11 CTQ28561.1 - 0.13 12.3 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1027) Shikimate_dh_N PF08501.11 CTQ28562.1 - 4.8e-12 46.0 0.0 8.8e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain ThiF PF00899.21 CTQ28562.1 - 2e-06 27.3 0.4 3.7e-06 26.5 0.4 1.4 1 0 0 1 1 1 1 ThiF family ApbA PF02558.16 CTQ28562.1 - 0.0025 17.5 0.1 0.0036 16.9 0.1 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Shikimate_DH PF01488.20 CTQ28562.1 - 0.004 17.2 0.0 0.0076 16.3 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_8 PF13450.6 CTQ28562.1 - 0.0068 16.6 0.2 0.013 15.7 0.2 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 CTQ28562.1 - 0.013 15.4 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DAO PF01266.24 CTQ28562.1 - 0.027 14.1 2.8 0.038 13.6 2.3 1.4 1 1 0 1 1 1 0 FAD dependent oxidoreductase 2-Hacid_dh_C PF02826.19 CTQ28562.1 - 0.029 13.7 0.0 0.043 13.2 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 CTQ28562.1 - 0.052 12.8 0.0 0.077 12.2 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF2656 PF10847.8 CTQ28562.1 - 0.058 13.5 0.0 0.78 9.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2656) adh_short PF00106.25 CTQ28562.1 - 0.06 12.8 0.0 0.089 12.2 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase FAD_binding_3 PF01494.19 CTQ28562.1 - 0.065 12.5 1.1 0.11 11.7 0.8 1.5 2 0 0 2 2 2 0 FAD binding domain Glyco_tran_WecB PF03808.13 CTQ28562.1 - 0.081 12.9 0.0 0.19 11.7 0.0 1.5 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family Sacchrp_dh_NADP PF03435.18 CTQ28562.1 - 0.14 12.4 0.1 0.33 11.2 0.1 1.7 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain MFS_1 PF07690.16 CTQ28563.1 - 2.5e-56 191.1 32.2 2.5e-56 191.1 32.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28563.1 - 0.17 10.7 33.5 0.31 9.8 11.7 2.9 2 2 1 3 3 3 0 Sugar (and other) transporter DUF3464 PF11947.8 CTQ28563.1 - 0.37 10.5 5.5 0.057 13.2 1.0 1.9 2 0 0 2 2 2 0 Photosynthesis affected mutant 68 AP_endonuc_2 PF01261.24 CTQ28564.1 - 1.2e-34 119.6 0.1 2.5e-34 118.5 0.1 1.6 2 0 0 2 2 2 1 Xylose isomerase-like TIM barrel Glyoxalase_5 PF14696.6 CTQ28564.1 - 2.7e-28 98.9 0.0 2.2e-27 96.0 0.0 2.1 2 0 0 2 2 2 1 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Glyoxalase_4 PF13669.6 CTQ28564.1 - 5.7e-07 29.8 0.1 0.013 15.8 0.0 2.7 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.25 CTQ28564.1 - 1.1e-06 28.8 0.0 3.7e-06 27.2 0.0 1.8 2 0 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TetR_C_29 PF17938.1 CTQ28565.1 - 7.7e-32 109.9 0.0 1.2e-31 109.2 0.0 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 CTQ28565.1 - 2.2e-13 49.8 0.5 4.4e-13 48.8 0.5 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 CTQ28565.1 - 3.2e-05 24.2 0.5 0.00035 20.8 0.0 2.5 2 1 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_4 PF08359.11 CTQ28565.1 - 0.0025 18.0 0.0 0.0037 17.4 0.0 1.3 1 0 0 1 1 1 1 YsiA-like protein, C-terminal region GCV_T PF01571.21 CTQ28565.1 - 0.018 14.4 0.0 0.034 13.5 0.0 1.3 1 0 0 1 1 1 0 Aminomethyltransferase folate-binding domain Cytochrom_B562 PF07361.11 CTQ28565.1 - 0.024 15.3 0.0 0.046 14.4 0.0 1.5 1 0 0 1 1 1 0 Cytochrome b562 dCache_1 PF02743.18 CTQ28565.1 - 0.14 12.0 0.0 0.29 10.9 0.0 1.5 2 0 0 2 2 2 0 Cache domain DUF2767 PF10965.8 CTQ28566.1 - 1.3e-34 117.9 0.5 1.5e-34 117.8 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2767) PK PF00224.21 CTQ28568.1 - 2.9e-151 503.3 10.6 3.5e-151 503.0 10.6 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 CTQ28568.1 - 1.6e-29 102.5 0.8 4.8e-29 101.0 0.3 2.1 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 CTQ28568.1 - 0.00024 20.3 0.3 0.00084 18.5 0.3 2.0 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family LPP PF04728.13 CTQ28569.1 - 8.6e-26 90.1 10.2 1e-25 89.9 10.2 1.1 1 0 0 1 1 1 1 Lipoprotein leucine-zipper Alanine_zipper PF11839.8 CTQ28569.1 - 0.00014 22.2 8.9 0.00018 21.8 7.3 1.7 1 1 1 2 2 2 1 Alanine-zipper, major outer membrane lipoprotein JIP_LZII PF16471.5 CTQ28569.1 - 0.00039 20.5 0.2 0.0038 17.4 0.1 2.0 1 1 1 2 2 2 1 JNK-interacting protein leucine zipper II MctB PF11382.8 CTQ28569.1 - 0.00063 19.6 0.9 0.00069 19.4 0.9 1.0 1 0 0 1 1 1 1 Copper transport outer membrane protein, MctB TMF_DNA_bd PF12329.8 CTQ28569.1 - 0.0017 18.3 0.2 0.0021 18.0 0.2 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 CTQ28569.1 - 0.0018 18.0 0.1 0.0022 17.7 0.1 1.2 1 0 0 1 1 1 1 Septum formation initiator ADIP PF11559.8 CTQ28569.1 - 0.0029 17.7 1.4 0.0034 17.5 1.4 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF948 PF06103.11 CTQ28569.1 - 0.0036 17.5 0.2 0.004 17.4 0.2 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) EzrA PF06160.12 CTQ28569.1 - 0.0038 15.5 0.4 0.0041 15.4 0.4 1.0 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA NPV_P10 PF05531.12 CTQ28569.1 - 0.0073 16.7 2.5 0.011 16.2 2.5 1.3 1 0 0 1 1 1 1 Nucleopolyhedrovirus P10 protein TPR_MLP1_2 PF07926.12 CTQ28569.1 - 0.011 15.8 2.0 0.013 15.6 2.0 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein YscO PF07321.12 CTQ28569.1 - 0.013 15.5 1.6 0.014 15.3 1.6 1.0 1 0 0 1 1 1 0 Type III secretion protein YscO DUF1664 PF07889.12 CTQ28569.1 - 0.013 15.5 0.2 0.017 15.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Tropomyosin_1 PF12718.7 CTQ28569.1 - 0.014 15.5 1.2 0.016 15.3 1.2 1.1 1 0 0 1 1 1 0 Tropomyosin like DUF16 PF01519.16 CTQ28569.1 - 0.019 15.4 0.1 0.023 15.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF16 Cluap1 PF10234.9 CTQ28569.1 - 0.025 14.0 1.2 0.031 13.7 1.2 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 ZapB PF06005.12 CTQ28569.1 - 0.026 15.0 0.5 0.034 14.6 0.5 1.1 1 0 0 1 1 1 0 Cell division protein ZapB DUF3138 PF11336.8 CTQ28569.1 - 0.029 13.0 0.7 0.03 13.0 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Atg14 PF10186.9 CTQ28569.1 - 0.029 13.5 0.5 0.031 13.4 0.5 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 EspB_PE PF18625.1 CTQ28569.1 - 0.03 14.8 1.6 0.034 14.6 1.6 1.3 1 1 0 1 1 1 0 ESX-1 secreted protein B PE domain Spc7 PF08317.11 CTQ28569.1 - 0.033 13.1 0.4 0.037 12.9 0.4 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein TolA_bind_tri PF16331.5 CTQ28569.1 - 0.034 14.2 0.7 0.052 13.6 0.7 1.3 1 0 0 1 1 1 0 TolA binding protein trimerisation COG2 PF06148.11 CTQ28569.1 - 0.037 14.1 0.2 0.04 14.0 0.2 1.1 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 AKNA PF12443.8 CTQ28569.1 - 0.053 14.2 0.1 0.063 13.9 0.1 1.2 1 0 0 1 1 1 0 AT-hook-containing transcription factor FlaC_arch PF05377.11 CTQ28569.1 - 0.055 13.9 0.2 0.073 13.5 0.2 1.3 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) MbeD_MobD PF04899.12 CTQ28569.1 - 0.065 13.4 0.7 0.1 12.7 0.3 1.5 1 1 0 1 1 1 0 MbeD/MobD like SlyX PF04102.12 CTQ28569.1 - 0.17 12.5 1.7 0.22 12.2 1.7 1.2 1 0 0 1 1 1 0 SlyX XhlA PF10779.9 CTQ28569.1 - 0.79 10.0 6.3 0.26 11.5 1.4 2.2 2 1 1 3 3 2 0 Haemolysin XhlA DUF4407 PF14362.6 CTQ28569.1 - 1.8 7.9 8.0 0.28 10.5 3.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Ldt_C PF17969.1 CTQ28570.1 - 3.5e-24 85.3 0.0 8.7e-24 84.0 0.0 1.7 2 0 0 2 2 2 1 L,D-transpeptidase C-terminal domain YkuD PF03734.14 CTQ28570.1 - 4.2e-20 72.6 0.0 6.7e-20 72.0 0.0 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain LysM PF01476.20 CTQ28570.1 - 1.5e-06 28.2 0.0 3.3e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 LysM domain DUF2749 PF10907.8 CTQ28570.1 - 0.13 12.5 0.4 0.54 10.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) SufE PF02657.15 CTQ28571.1 - 6.7e-41 139.0 0.0 7.6e-41 138.8 0.0 1.0 1 0 0 1 1 1 1 Fe-S metabolism associated domain Aminotran_5 PF00266.19 CTQ28572.1 - 2.2e-152 507.3 0.0 2.5e-152 507.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 CTQ28572.1 - 0.00092 18.6 0.6 0.0013 18.1 0.6 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 CTQ28572.1 - 0.0069 15.0 0.0 0.029 12.9 0.0 1.7 1 1 1 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 CTQ28572.1 - 0.066 12.5 0.0 0.073 12.3 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase UPF0051 PF01458.17 CTQ28573.1 - 3.4e-70 236.1 0.2 4.3e-70 235.8 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) DUF3576 PF12100.8 CTQ28573.1 - 0.15 12.2 0.2 4.7 7.4 0.0 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF3576) ABC_tran PF00005.27 CTQ28574.1 - 1.1e-19 71.4 0.0 1.4e-19 71.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 CTQ28574.1 - 2.5e-07 30.4 0.4 0.013 15.0 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 CTQ28574.1 - 1.3e-05 25.2 0.0 0.0045 16.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ28574.1 - 0.00062 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ28574.1 - 0.0046 16.9 0.0 0.0071 16.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_33 PF13671.6 CTQ28574.1 - 0.014 15.5 0.0 0.018 15.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 CTQ28574.1 - 0.016 15.2 0.1 8 6.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_13 PF13166.6 CTQ28574.1 - 0.02 13.6 0.0 0.031 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 CTQ28574.1 - 0.02 15.4 0.1 0.045 14.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 CTQ28574.1 - 0.024 15.2 0.0 0.034 14.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 CTQ28574.1 - 0.027 14.7 0.1 0.078 13.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 CTQ28574.1 - 0.035 13.7 0.0 0.062 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 CTQ28574.1 - 0.035 14.4 0.4 0.28 11.5 0.4 2.2 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 CTQ28574.1 - 0.047 13.3 0.0 0.086 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 CTQ28574.1 - 0.084 12.6 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Cytidylate kinase UPF0051 PF01458.17 CTQ28575.1 - 6.4e-69 232.0 0.0 8e-69 231.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) CHIPS PF11434.8 CTQ28575.1 - 0.059 13.2 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS DUF3463 PF11946.8 CTQ28575.1 - 0.078 12.8 0.3 0.16 11.8 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) Fe-S_biosyn PF01521.20 CTQ28576.1 - 1.4e-18 67.1 0.0 1.6e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis DoxX PF07681.12 CTQ28578.1 - 3.1e-07 30.9 9.6 5.4e-07 30.1 9.6 1.3 1 0 0 1 1 1 1 DoxX DoxX_2 PF13564.6 CTQ28578.1 - 0.051 13.7 8.1 0.062 13.4 7.8 1.5 1 1 0 1 1 1 0 DoxX-like family TetR_C_7 PF14246.6 CTQ28579.1 - 5.5e-26 90.9 1.3 6.1e-25 87.6 0.1 2.1 1 1 1 2 2 2 1 AefR-like transcriptional repressor, C-terminal domain TetR_N PF00440.23 CTQ28579.1 - 4.3e-15 55.2 0.9 9.1e-15 54.2 0.9 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 CTQ28579.1 - 5.3e-05 23.4 1.5 0.00011 22.3 1.5 1.5 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_C_11 PF16859.5 CTQ28579.1 - 0.0016 18.7 1.0 0.0016 18.7 1.0 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 CTQ28579.1 - 0.0052 16.9 0.0 0.0083 16.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase TetR_C_27 PF17935.1 CTQ28579.1 - 0.022 14.8 0.0 0.042 13.9 0.0 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain STPPase_N PF16891.5 CTQ28579.1 - 0.032 14.7 0.0 6.7 7.2 0.0 2.6 2 0 0 2 2 2 0 Serine-threonine protein phosphatase N-terminal domain TOBE_3 PF12857.7 CTQ28579.1 - 0.077 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 TOBE-like domain TetR_C_25 PF17933.1 CTQ28579.1 - 0.085 13.2 0.1 1.8 9.0 0.0 2.3 2 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TetR_C_24 PF17932.1 CTQ28579.1 - 0.11 12.8 0.0 0.32 11.3 0.0 1.8 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain PT-TG PF14449.6 CTQ28579.1 - 0.11 12.3 0.0 0.32 10.9 0.0 1.7 2 0 0 2 2 2 0 Pre-toxin TG FMN_dh PF01070.18 CTQ28580.1 - 1.2e-123 412.6 0.5 1.4e-123 412.4 0.5 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 CTQ28580.1 - 1.2e-07 31.5 0.2 1.8e-07 30.9 0.2 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.25 CTQ28580.1 - 4.7e-05 22.6 0.1 0.00012 21.2 0.1 1.7 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain IGPS PF00218.21 CTQ28580.1 - 0.01 15.0 0.0 0.017 14.3 0.0 1.2 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase Glu_synthase PF01645.17 CTQ28580.1 - 0.022 13.9 0.6 0.035 13.3 0.6 1.3 1 0 0 1 1 1 0 Conserved region in glutamate synthase ThiG PF05690.14 CTQ28580.1 - 0.2 10.9 2.7 4.5 6.5 0.4 2.8 2 1 1 3 3 3 0 Thiazole biosynthesis protein ThiG B277 PF17623.2 CTQ28580.1 - 0.21 10.6 0.1 0.31 10.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function ACR_tran PF00873.19 CTQ28581.1 - 4.2e-147 491.5 4.4 5.5e-147 491.1 4.4 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family ABC_membrane PF00664.23 CTQ28581.1 - 0.0035 17.0 1.1 0.0035 17.0 1.1 2.7 3 0 0 3 3 3 1 ABC transporter transmembrane region HTH_55 PF18622.1 CTQ28581.1 - 0.051 13.9 0.0 0.14 12.5 0.0 1.7 1 0 0 1 1 1 0 RctB helix turn helix domain HlyD_D23 PF16576.5 CTQ28582.1 - 1.2e-12 47.6 4.2 1.8e-12 47.0 4.2 1.2 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 CTQ28582.1 - 1.8e-11 44.6 2.1 4.5e-08 33.7 0.3 2.8 2 1 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 CTQ28582.1 - 1.3e-08 34.5 14.1 1.7e-07 30.9 1.1 2.9 3 0 0 3 3 3 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 CTQ28582.1 - 0.00022 21.0 0.1 0.28 11.0 0.2 2.4 2 0 0 2 2 2 2 Biotin-requiring enzyme PTS_EIIA_1 PF00358.20 CTQ28582.1 - 0.0031 17.2 0.0 0.14 11.9 0.0 2.3 2 0 0 2 2 2 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SHOCT PF09851.9 CTQ28582.1 - 0.022 14.5 0.0 0.052 13.3 0.0 1.6 1 0 0 1 1 1 0 Short C-terminal domain Peptidase_M23 PF01551.22 CTQ28582.1 - 0.098 12.9 0.1 8.9 6.6 0.0 2.5 2 0 0 2 2 2 0 Peptidase family M23 TetR_N PF00440.23 CTQ28583.1 - 9.9e-14 50.9 1.3 2.4e-13 49.6 1.3 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_27 PF17935.1 CTQ28583.1 - 7.6e-12 45.2 0.0 1.2e-11 44.7 0.0 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_24 PF17932.1 CTQ28583.1 - 0.0047 17.2 0.3 0.22 11.8 0.2 2.2 1 1 1 2 2 2 2 Tetracyclin repressor-like, C-terminal domain OMPdecase PF00215.24 CTQ28583.1 - 0.061 12.9 0.1 0.14 11.7 0.0 1.6 1 1 1 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family TetR_C_4 PF08359.11 CTQ28583.1 - 0.11 12.6 0.1 1.2 9.2 0.1 2.2 1 1 0 1 1 1 0 YsiA-like protein, C-terminal region WIYLD PF10440.9 CTQ28583.1 - 0.13 12.1 0.0 0.33 10.8 0.0 1.7 1 1 0 1 1 1 0 Ubiquitin-binding WIYLD domain NAD_binding_10 PF13460.6 CTQ28584.1 - 1.8e-11 44.3 0.3 3.1e-11 43.5 0.3 1.4 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 CTQ28584.1 - 2.6e-10 40.2 0.0 4.1e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 CTQ28584.1 - 1.3e-05 24.4 0.1 0.00032 19.9 0.1 2.4 1 1 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 CTQ28584.1 - 8.3e-05 22.3 0.0 0.00013 21.6 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 CTQ28584.1 - 0.00049 19.6 0.1 0.00097 18.6 0.1 1.6 1 0 0 1 1 1 1 short chain dehydrogenase 3Beta_HSD PF01073.19 CTQ28584.1 - 0.19 10.7 0.0 0.27 10.2 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family LysR_substrate PF03466.20 CTQ28585.1 - 3e-30 105.2 10.4 4e-30 104.8 10.4 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28585.1 - 2.9e-16 59.2 0.6 7.5e-16 57.8 0.6 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Peripla_BP_2 PF01497.18 CTQ28586.1 - 1.6e-32 113.0 0.1 2.1e-32 112.6 0.1 1.2 1 0 0 1 1 1 1 Periplasmic binding protein FecCD PF01032.18 CTQ28587.1 - 8.7e-89 297.6 40.4 1.1e-88 297.3 40.4 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 CTQ28587.1 - 6.8e-05 22.5 26.3 6.8e-05 22.5 26.3 2.0 2 1 0 2 2 2 1 ABC 3 transport family ABC_tran PF00005.27 CTQ28588.1 - 2.7e-34 118.6 0.0 3.6e-34 118.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28588.1 - 8.9e-09 35.6 0.1 8.9e-05 22.4 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28588.1 - 4.7e-05 22.9 0.1 0.00036 20.1 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ28588.1 - 0.00031 21.2 0.3 0.00056 20.3 0.3 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 CTQ28588.1 - 0.0075 16.0 0.0 0.25 11.0 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain CutC PF03932.14 CTQ28588.1 - 0.02 14.4 0.0 0.036 13.5 0.0 1.4 1 0 0 1 1 1 0 CutC family BCA_ABC_TP_C PF12399.8 CTQ28588.1 - 0.036 14.0 0.0 0.091 12.7 0.0 1.7 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter AAA PF00004.29 CTQ28588.1 - 0.042 14.3 0.0 0.087 13.3 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 CTQ28588.1 - 0.044 13.7 0.0 0.069 13.1 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 CTQ28588.1 - 0.06 13.1 0.0 0.16 11.7 0.0 1.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_5 PF07728.14 CTQ28588.1 - 0.09 12.8 0.2 0.55 10.2 0.1 2.1 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 CTQ28588.1 - 0.14 12.7 0.0 0.24 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain MFS_1 PF07690.16 CTQ28589.1 - 2e-26 92.7 43.6 3e-26 92.2 43.6 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ28589.1 - 1.8e-06 27.1 13.2 7.1e-06 25.1 7.3 2.1 1 1 1 2 2 2 2 MFS_1 like family DUF2516 PF10724.9 CTQ28589.1 - 0.2 12.0 3.3 0.54 10.6 0.2 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF2516) Sugar_tr PF00083.24 CTQ28589.1 - 7.4 5.3 15.7 1.1 8.0 8.9 2.4 1 1 1 2 2 2 0 Sugar (and other) transporter Meth_synt_2 PF01717.18 CTQ28590.1 - 9.8e-40 136.8 0.0 1.9e-39 135.9 0.0 1.4 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain CNP1 PF08750.11 CTQ28590.1 - 0.00037 20.5 0.0 0.00065 19.7 0.0 1.3 1 0 0 1 1 1 1 CNP1-like family Meth_synt_1 PF08267.12 CTQ28590.1 - 0.002 17.7 0.0 0.0088 15.6 0.0 2.0 2 1 0 2 2 2 1 Cobalamin-independent synthase, N-terminal domain DUF1852 PF08908.11 CTQ28591.1 - 4.3e-179 594.4 4.5 4.9e-179 594.3 4.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1852) LPAM_1 PF08139.12 CTQ28592.1 - 0.16 12.6 3.9 0.36 11.4 3.9 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF4148 PF13663.6 CTQ28592.1 - 0.23 11.7 2.8 0.27 11.5 2.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4148) Transgly_assoc PF04226.13 CTQ28593.1 - 3.8e-16 59.1 12.3 3.8e-16 59.1 12.3 2.2 1 1 1 2 2 2 1 Transglycosylase associated protein DUF5518 PF17647.1 CTQ28593.1 - 9.7e-05 22.5 17.4 0.00011 22.4 17.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5518) Gly-zipper_YMGG PF13441.6 CTQ28593.1 - 0.46 10.3 6.1 0.24 11.1 3.8 1.7 1 1 1 2 2 2 0 YMGG-like Gly-zipper DUF2306 PF10067.9 CTQ28593.1 - 0.64 10.2 5.5 0.24 11.6 2.9 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2306) DUF2632 PF10943.8 CTQ28593.1 - 1.3 8.5 5.9 1.6 8.3 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2632) Trep_Strep PF09605.10 CTQ28593.1 - 4 7.4 15.3 1.1 9.3 7.6 2.2 1 1 1 2 2 2 0 Hypothetical bacterial integral membrane protein (Trep_Strep) FeoB_C PF07664.12 CTQ28593.1 - 5.6 6.7 14.8 1 9.1 0.3 3.0 1 1 2 3 3 3 0 Ferrous iron transport protein B C terminus DUF2537 PF10801.8 CTQ28593.1 - 7.2 6.9 14.7 1 9.6 1.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2537) DUF4282 PF14110.6 CTQ28593.1 - 8.9 7.1 13.4 2.4 8.9 8.5 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4282) 4HBT PF03061.22 CTQ28594.1 - 1.7e-15 57.1 0.5 2.4e-15 56.6 0.5 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 CTQ28594.1 - 0.11 12.6 0.0 0.13 12.4 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4442) FAD-oxidase_C PF02913.19 CTQ28595.1 - 9.6e-66 221.9 0.0 1.6e-65 221.3 0.0 1.4 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 CTQ28595.1 - 6e-38 129.7 0.0 1.4e-37 128.5 0.0 1.7 1 0 0 1 1 1 1 FAD binding domain Fer4_8 PF13183.6 CTQ28595.1 - 6.8e-13 48.9 0.9 1.6e-12 47.6 0.9 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain BBE PF08031.12 CTQ28595.1 - 0.001 19.1 0.2 0.0079 16.3 0.0 2.3 2 0 0 2 2 2 1 Berberine and berberine like Fer4_20 PF14691.6 CTQ28595.1 - 0.0019 17.9 0.3 0.0042 16.8 0.3 1.5 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_17 PF13534.6 CTQ28595.1 - 0.0034 17.9 4.3 0.037 14.6 4.3 2.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 CTQ28595.1 - 0.031 14.4 0.1 0.065 13.4 0.1 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 CTQ28595.1 - 0.04 14.5 0.2 0.04 14.5 0.2 1.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ28595.1 - 0.47 10.6 5.3 1.2 9.3 3.2 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain AI-2E_transport PF01594.16 CTQ28596.1 - 1.1e-57 195.7 38.7 1.2e-57 195.5 38.7 1.0 1 0 0 1 1 1 1 AI-2E family transporter PPDK_N PF01326.19 CTQ28597.1 - 2e-120 402.0 0.3 2.9e-120 401.5 0.3 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 CTQ28597.1 - 6.3e-60 202.8 0.0 1.3e-59 201.7 0.0 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 CTQ28597.1 - 5.5e-27 93.3 0.3 1.8e-26 91.6 0.3 2.0 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 CTQ28597.1 - 0.036 13.3 0.0 0.16 11.1 0.0 2.1 3 0 0 3 3 3 0 Divergent polysaccharide deacetylase HpcH_HpaI PF03328.14 CTQ28597.1 - 0.056 12.6 0.3 0.25 10.4 0.0 2.3 3 0 0 3 3 3 0 HpcH/HpaI aldolase/citrate lyase family Kinase-PPPase PF03618.14 CTQ28599.1 - 4.4e-72 242.9 0.0 4.9e-72 242.8 0.0 1.0 1 0 0 1 1 1 1 Kinase/pyrophosphorylase DAHP_synth_1 PF00793.20 CTQ28600.1 - 5.1e-105 350.3 0.0 6.2e-105 350.0 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family DBD_HTH PF18430.1 CTQ28600.1 - 0.14 11.9 0.2 1.3 8.8 0.0 2.3 2 0 0 2 2 2 0 Putative DNA-binding domain hemP PF10636.9 CTQ28601.1 - 4.9e-17 61.5 0.5 7.5e-17 60.8 0.5 1.3 1 0 0 1 1 1 1 Hemin uptake protein hemP UPF0061 PF02696.14 CTQ28602.1 - 2.4e-158 527.8 0.0 2.7e-158 527.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, YdiU/UPF0061 family Ubiq_cyt_C_chap PF03981.12 CTQ28602.1 - 0.051 13.7 1.6 0.42 10.7 0.2 2.6 3 0 0 3 3 3 0 Ubiquinol-cytochrome C chaperone NLPC_P60 PF00877.19 CTQ28603.1 - 4.9e-30 103.7 0.0 6e-30 103.4 0.0 1.1 1 0 0 1 1 1 1 NlpC/P60 family DUF1175 PF06672.11 CTQ28603.1 - 0.007 16.1 0.0 0.029 14.0 0.0 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF1175) CHAP PF05257.16 CTQ28603.1 - 0.13 12.8 0.0 0.22 12.1 0.0 1.4 1 0 0 1 1 1 0 CHAP domain ABC_tran PF00005.27 CTQ28604.1 - 2.1e-22 80.1 0.0 3.5e-22 79.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28604.1 - 1.7e-11 44.5 0.1 2.6e-06 27.5 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 CTQ28604.1 - 8.3e-06 26.3 0.5 1.7e-05 25.2 0.5 1.5 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 CTQ28604.1 - 8.3e-05 22.1 0.1 0.27 10.6 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ28604.1 - 0.00032 20.4 0.0 0.00064 19.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 CTQ28604.1 - 0.0015 18.7 0.2 0.048 13.8 0.1 2.2 2 0 0 2 2 2 1 AAA domain SbcCD_C PF13558.6 CTQ28604.1 - 0.0047 17.1 0.0 0.0096 16.1 0.0 1.6 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 CTQ28604.1 - 0.0048 16.8 0.0 0.041 13.8 0.0 2.0 2 0 0 2 2 2 1 RsgA GTPase AAA_25 PF13481.6 CTQ28604.1 - 0.0055 16.3 0.7 0.056 13.0 0.7 2.4 1 1 0 1 1 1 1 AAA domain CCDC32 PF14989.6 CTQ28604.1 - 0.0081 16.2 0.0 0.041 13.9 0.0 1.9 2 0 0 2 2 2 1 Coiled-coil domain containing 32 AAA_22 PF13401.6 CTQ28604.1 - 0.016 15.5 0.4 0.14 12.4 0.4 2.1 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 CTQ28604.1 - 0.033 14.7 0.0 0.052 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ28604.1 - 0.057 13.1 0.3 0.62 9.8 0.1 2.2 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 CTQ28604.1 - 0.064 12.8 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain EccE PF11203.8 CTQ28604.1 - 0.12 12.7 1.3 0.32 11.4 0.7 2.1 2 1 0 2 2 2 0 Putative type VII ESX secretion system translocon, EccE AAA_15 PF13175.6 CTQ28604.1 - 0.14 11.8 0.0 1.3 8.6 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA_28 PF13521.6 CTQ28604.1 - 0.16 12.2 0.0 0.31 11.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.22 CTQ28604.1 - 0.19 11.3 0.4 0.35 10.5 0.1 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain GSHPx PF00255.19 CTQ28605.1 - 1.6e-44 149.9 0.1 2e-44 149.6 0.1 1.1 1 0 0 1 1 1 1 Glutathione peroxidase Redoxin PF08534.10 CTQ28605.1 - 2e-06 27.6 0.0 0.00021 21.0 0.0 2.1 2 0 0 2 2 2 2 Redoxin AhpC-TSA PF00578.21 CTQ28605.1 - 0.00014 21.7 0.1 0.0004 20.3 0.0 1.8 2 1 0 2 2 2 1 AhpC/TSA family Lipoprotein_9 PF03180.14 CTQ28606.1 - 3.3e-84 281.7 1.1 3.8e-84 281.5 1.1 1.0 1 0 0 1 1 1 1 NLPA lipoprotein DUF4223 PF13978.6 CTQ28606.1 - 0.006 16.5 0.1 0.013 15.5 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF4223) Phosphonate-bd PF12974.7 CTQ28606.1 - 0.0092 15.6 0.1 0.047 13.3 0.0 1.9 2 0 0 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein LPAM_1 PF08139.12 CTQ28606.1 - 0.52 10.9 6.2 1.9 9.1 6.2 2.0 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site FecCD PF01032.18 CTQ28607.1 - 1.2e-87 293.8 36.5 1.5e-87 293.5 36.5 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 CTQ28607.1 - 7.5e-06 25.6 15.1 1.4e-05 24.7 15.1 1.4 1 0 0 1 1 1 1 ABC 3 transport family NUP PF06516.11 CTQ28607.1 - 0.057 12.6 0.0 0.079 12.2 0.0 1.1 1 0 0 1 1 1 0 Purine nucleoside permease (NUP) DUF2116 PF09889.9 CTQ28608.1 - 0.64 10.0 0.0 0.64 10.0 0.0 3.8 4 0 0 4 4 4 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) UL45 PF05473.12 CTQ28608.1 - 0.83 9.3 0.0 0.83 9.3 0.0 2.5 3 0 0 3 3 3 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF1294 PF06961.13 CTQ28608.1 - 3.1 8.1 6.5 2.8 8.3 0.1 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1294) LysR_substrate PF03466.20 CTQ28609.1 - 7.6e-23 81.0 0.2 1e-22 80.5 0.2 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28609.1 - 2.2e-18 66.0 0.2 4.5e-18 65.0 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DAO PF01266.24 CTQ28610.1 - 1.1e-57 196.2 0.1 1.3e-57 196.0 0.1 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CTQ28610.1 - 2.6e-08 34.0 0.4 1.3e-07 31.8 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 CTQ28610.1 - 4.3e-08 32.3 0.0 0.00019 20.2 0.1 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_2 PF00890.24 CTQ28610.1 - 6.1e-06 25.6 0.9 1.1e-05 24.8 0.9 1.6 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 CTQ28610.1 - 2e-05 24.0 0.0 5.1e-05 22.7 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ28610.1 - 7.7e-05 23.2 0.1 0.00018 22.0 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ28610.1 - 0.001 18.4 0.0 0.033 13.4 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 CTQ28610.1 - 0.0023 17.2 0.0 0.0033 16.7 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_9 PF13454.6 CTQ28610.1 - 0.0027 17.7 0.1 0.2 11.6 0.1 2.4 2 0 0 2 2 2 1 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 CTQ28610.1 - 0.0039 16.5 0.1 0.0066 15.8 0.1 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 CTQ28610.1 - 0.0046 16.2 0.1 0.0069 15.7 0.1 1.2 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 CTQ28610.1 - 0.0065 15.6 0.1 0.012 14.7 0.1 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A Amino_oxidase PF01593.24 CTQ28610.1 - 0.0097 15.2 1.0 0.15 11.3 0.1 2.4 2 1 0 2 2 2 1 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 CTQ28610.1 - 0.011 15.1 0.0 0.031 13.6 0.0 1.7 2 0 0 2 2 2 0 FAD dependent oxidoreductase ApbA PF02558.16 CTQ28610.1 - 0.013 15.1 0.2 0.031 13.9 0.2 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 CTQ28610.1 - 0.078 13.4 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding Glyco_trans_4_4 PF13579.6 CTQ28610.1 - 0.11 12.9 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain UDPG_MGDP_dh_N PF03721.14 CTQ28610.1 - 0.12 11.9 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 CTQ28610.1 - 0.13 12.1 0.1 0.24 11.3 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 CTQ28610.1 - 0.77 10.4 2.9 0.58 10.8 0.1 2.2 3 0 0 3 3 2 0 NADP oxidoreductase coenzyme F420-dependent Ribonuc_L-PSP PF01042.21 CTQ28611.1 - 2.3e-23 82.5 0.0 2.8e-23 82.2 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Bac_DNA_binding PF00216.21 CTQ28612.1 - 2.6e-30 104.5 0.1 2.9e-30 104.3 0.1 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 CTQ28612.1 - 1.2e-07 31.8 0.0 1.5e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 CTQ28612.1 - 1.8e-06 27.7 0.0 2.7e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 CTQ28612.1 - 0.0091 16.1 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 HU-DNA_bdg PF14848.6 CTQ28612.1 - 0.17 11.9 0.0 2.2 8.3 0.0 2.1 2 0 0 2 2 2 0 DNA-binding domain B3_4 PF03483.17 CTQ28613.1 - 7.4e-72 240.6 0.0 1.1e-71 240.1 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain tRNA_synthFbeta PF17759.1 CTQ28613.1 - 1e-54 185.2 0.0 1.8e-54 184.4 0.0 1.4 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA_bind PF01588.20 CTQ28613.1 - 1.5e-28 98.7 0.1 4.3e-28 97.3 0.1 1.8 1 0 0 1 1 1 1 Putative tRNA binding domain FDX-ACB PF03147.14 CTQ28613.1 - 5.5e-28 97.2 0.3 1.4e-27 96.0 0.1 1.8 2 0 0 2 2 2 1 Ferredoxin-fold anticodon binding domain B5 PF03484.15 CTQ28613.1 - 4.6e-22 78.1 0.5 2.3e-21 75.9 0.2 2.4 2 0 0 2 2 2 1 tRNA synthetase B5 domain PhetRS_B1 PF18262.1 CTQ28613.1 - 0.00091 19.4 0.0 1.1 9.5 0.0 3.8 4 0 0 4 4 4 1 Phe-tRNA synthetase beta subunit B1 domain tRNA-synt_2d PF01409.20 CTQ28614.1 - 9.2e-108 359.3 0.1 1.1e-107 359.1 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Phe_tRNA-synt_N PF02912.18 CTQ28614.1 - 4.6e-27 93.7 1.6 7.7e-27 93.0 1.1 1.7 2 0 0 2 2 2 1 Aminoacyl tRNA synthetase class II, N-terminal domain tRNA_synthFbeta PF17759.1 CTQ28614.1 - 0.00013 21.4 0.0 0.00082 18.9 0.0 2.2 3 0 0 3 3 3 1 Phenylalanyl tRNA synthetase beta chain CLM domain FAD-oxidase_C PF02913.19 CTQ28614.1 - 0.043 13.4 0.2 0.69 9.5 0.1 2.1 1 1 1 2 2 2 0 FAD linked oxidases, C-terminal domain Ribosomal_L20 PF00453.18 CTQ28616.1 - 4.3e-49 165.1 9.4 4.9e-49 164.9 9.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L20 SMC_ScpA PF02616.14 CTQ28616.1 - 0.0054 16.7 0.5 0.0081 16.1 0.5 1.2 1 0 0 1 1 1 1 Segregation and condensation protein ScpA IF3_C PF00707.22 CTQ28618.1 - 1.3e-37 127.6 0.5 2.1e-37 126.9 0.5 1.3 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain IF3_N PF05198.16 CTQ28618.1 - 2.7e-21 75.6 0.3 6.6e-21 74.4 0.0 1.8 2 0 0 2 2 2 1 Translation initiation factor IF-3, N-terminal domain DUF2303 PF10065.9 CTQ28618.1 - 0.022 13.9 0.1 0.029 13.5 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) tRNA-synt_2b PF00587.25 CTQ28619.1 - 3.9e-51 173.6 0.0 8.5e-51 172.4 0.0 1.6 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 CTQ28619.1 - 1.4e-23 82.8 1.6 4.2e-23 81.3 1.6 1.8 1 0 0 1 1 1 1 Anticodon binding domain TGS PF02824.21 CTQ28619.1 - 1.2e-14 54.1 0.1 7.1e-13 48.4 0.0 2.5 2 0 0 2 2 2 1 TGS domain tRNA_SAD PF07973.14 CTQ28619.1 - 2.2e-14 53.2 0.0 4.6e-14 52.2 0.0 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DUF481 PF04338.12 CTQ28622.1 - 6.5e-55 186.4 8.6 7.5e-55 186.2 8.6 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF481 PfkB PF00294.24 CTQ28623.1 - 1.2e-56 192.2 0.1 1.5e-56 192.0 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 CTQ28623.1 - 9.5e-06 25.2 0.0 1.6e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 CTQ28623.1 - 0.013 15.0 0.1 0.017 14.6 0.1 1.2 1 0 0 1 1 1 0 Carbohydrate kinase GhoS PF11080.8 CTQ28624.1 - 4e-38 129.3 0.1 4.4e-38 129.1 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease GhoS Fructosamin_kin PF03881.14 CTQ28625.1 - 5.1e-113 377.1 0.0 5.8e-113 376.9 0.0 1.0 1 0 0 1 1 1 1 Fructosamine kinase APH PF01636.23 CTQ28625.1 - 6.2e-22 78.7 1.8 9.3e-22 78.1 1.8 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family TonB_N PF16031.5 CTQ28626.1 - 2.7e-36 125.0 55.2 3.6e-36 124.6 55.2 1.2 1 0 0 1 1 1 1 TonB polyproline region TonB_C PF03544.14 CTQ28626.1 - 1.7e-17 63.6 0.0 3.6e-17 62.6 0.0 1.6 1 0 0 1 1 1 1 Gram-negative bacterial TonB protein C-terminal YCII PF03795.14 CTQ28627.1 - 2.1e-26 92.1 0.0 2.4e-26 92.0 0.0 1.0 1 0 0 1 1 1 1 YCII-related domain DUF1330 PF07045.11 CTQ28627.1 - 0.00014 22.1 0.0 0.00019 21.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1330) YceI PF04264.13 CTQ28628.1 - 9.2e-37 126.8 1.4 1.1e-36 126.6 1.4 1.1 1 0 0 1 1 1 1 YceI-like domain PLDc_2 PF13091.6 CTQ28631.1 - 1.8e-37 128.2 0.0 1e-22 80.5 0.0 2.5 3 0 0 3 3 3 2 PLD-like domain PLDc PF00614.22 CTQ28631.1 - 4.6e-16 58.3 0.9 2.2e-07 30.8 0.0 2.7 3 0 0 3 3 3 2 Phospholipase D Active site motif PLDc_N PF13396.6 CTQ28631.1 - 5.5e-07 29.4 5.6 1.2e-06 28.3 5.6 1.6 1 0 0 1 1 1 1 Phospholipase_D-nuclease N-terminal DUF440 PF04269.12 CTQ28632.1 - 2.8e-45 152.7 0.4 3.1e-45 152.6 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF440 Ion_trans PF00520.31 CTQ28633.1 - 6.3e-27 94.4 19.0 7.8e-27 94.1 19.0 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 CTQ28633.1 - 1.9e-16 59.8 9.8 1.9e-16 59.8 9.8 2.3 2 1 1 3 3 3 1 Ion channel PKD_channel PF08016.12 CTQ28633.1 - 1e-05 24.4 3.4 1e-05 24.4 3.4 2.1 1 1 0 2 2 2 2 Polycystin cation channel DZR PF12773.7 CTQ28633.1 - 0.00059 19.8 1.8 0.0009 19.2 1.8 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 CTQ28633.1 - 0.0015 18.2 1.7 0.0069 16.1 0.1 2.1 2 0 0 2 2 2 1 zinc-ribbon domain UPF0547 PF10571.9 CTQ28633.1 - 0.88 9.7 7.2 1.2 9.3 0.6 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 ABC_tran PF00005.27 CTQ28634.1 - 1.9e-31 109.4 0.0 2.6e-31 109.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 CTQ28634.1 - 5.5e-19 68.4 0.1 9.7e-19 67.7 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 CTQ28634.1 - 0.00024 21.4 0.1 0.0027 18.0 0.1 2.3 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ28634.1 - 0.0025 17.3 0.0 0.0045 16.5 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 CTQ28634.1 - 0.0032 17.3 0.1 1.1 9.0 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system PRK PF00485.18 CTQ28634.1 - 0.028 14.2 0.3 0.08 12.7 0.1 1.8 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 CTQ28634.1 - 0.029 14.3 0.2 0.055 13.4 0.2 1.4 1 0 0 1 1 1 0 NACHT domain GlgX_C PF18390.1 CTQ28634.1 - 0.029 14.1 0.0 0.054 13.3 0.0 1.4 1 0 0 1 1 1 0 Glycogen debranching enzyme C-terminal domain AAA PF00004.29 CTQ28634.1 - 0.051 14.0 0.0 0.12 12.8 0.0 1.6 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 CTQ28634.1 - 0.055 13.4 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 CTQ28634.1 - 0.058 13.1 0.1 0.1 12.4 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain MobB PF03205.14 CTQ28634.1 - 0.069 13.0 0.1 0.14 12.0 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.6 CTQ28634.1 - 0.073 13.5 0.1 0.11 12.9 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 CTQ28634.1 - 0.081 13.0 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase RNA_helicase PF00910.22 CTQ28634.1 - 0.11 12.9 0.0 0.22 11.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 CTQ28634.1 - 0.12 12.0 0.3 0.45 10.2 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain TniB PF05621.11 CTQ28634.1 - 0.13 11.6 0.6 0.94 8.8 0.1 2.1 2 0 0 2 2 2 0 Bacterial TniB protein NB-ARC PF00931.22 CTQ28634.1 - 0.18 10.9 0.0 0.27 10.4 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_13 PF13166.6 CTQ28634.1 - 0.34 9.5 0.3 0.94 8.0 0.1 1.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 CTQ28635.1 - 8.8e-28 97.5 0.0 1.2e-27 97.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 CTQ28635.1 - 1.4e-21 76.7 0.1 2.7e-21 75.9 0.1 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 CTQ28635.1 - 1.2e-06 28.6 0.5 4.7e-06 26.6 0.0 1.9 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28635.1 - 0.00039 19.9 0.2 0.00093 18.7 0.2 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain IstB_IS21 PF01695.17 CTQ28635.1 - 0.019 14.7 0.2 0.9 9.2 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_29 PF13555.6 CTQ28635.1 - 0.07 12.9 1.5 0.1 12.3 0.5 1.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain BPD_transp_1 PF00528.22 CTQ28636.1 - 9.8e-26 90.6 9.4 9.8e-26 90.6 9.4 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ28636.1 - 2e-13 50.1 0.4 2e-13 50.1 0.4 3.3 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 CTQ28637.1 - 7.1e-39 133.5 18.7 7.1e-39 133.5 18.7 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BCLP PF12304.8 CTQ28637.1 - 7.4 6.1 8.7 1.4 8.4 1.2 2.5 2 1 0 2 2 2 0 Beta-casein like protein SBP_bac_5 PF00496.22 CTQ28638.1 - 6.5e-86 288.6 9.1 8.6e-86 288.2 9.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle MarC PF01914.17 CTQ28639.1 - 7.6e-75 250.8 10.7 8.5e-75 250.6 10.7 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DUF3087 PF11286.8 CTQ28639.1 - 1 8.8 5.4 0.9 9.0 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3087) Trp_oprn_chp PF09534.10 CTQ28639.1 - 1 9.1 4.0 1.3 8.7 0.5 2.3 1 1 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) YrvL PF14184.6 CTQ28639.1 - 5.1 7.2 14.4 4 7.6 1.7 3.1 2 2 1 3 3 3 0 Regulatory protein YrvL PNTB_4TM PF12769.7 CTQ28639.1 - 8 7.0 10.9 14 6.3 1.2 3.0 2 2 0 2 2 2 0 4TM region of pyridine nucleotide transhydrogenase, mitoch Fe-ADH PF00465.19 CTQ28641.1 - 7.7e-114 380.3 0.3 1.2e-113 379.7 0.3 1.3 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Aldedh PF00171.22 CTQ28641.1 - 1.1e-28 100.0 3.4 1.5e-27 96.2 3.4 2.0 1 1 0 1 1 1 1 Aldehyde dehydrogenase family Fe-ADH_2 PF13685.6 CTQ28641.1 - 1.2e-15 57.9 1.0 2.4e-06 27.4 1.2 2.6 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase HTH_AsnC-type PF13404.6 CTQ28641.1 - 0.066 13.1 0.5 0.36 10.7 0.0 2.4 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DUF3235 PF11574.8 CTQ28641.1 - 6.3 7.7 6.9 4.3 8.3 0.0 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF3235) TK PF00265.18 CTQ28642.1 - 3.7e-51 173.5 0.0 4.2e-51 173.3 0.0 1.0 1 0 0 1 1 1 1 Thymidine kinase AAA_22 PF13401.6 CTQ28642.1 - 0.06 13.6 0.0 0.086 13.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain Histone_HNS PF00816.21 CTQ28643.1 - 2.6e-20 73.0 4.4 2.6e-20 73.0 4.4 1.9 1 1 1 2 2 2 1 H-NS histone family DUF3037 PF11236.8 CTQ28643.1 - 0.0032 17.9 0.6 0.0041 17.6 0.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3037) TetR_C_24 PF17932.1 CTQ28643.1 - 0.026 14.8 0.9 0.037 14.3 0.9 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain PaaX_C PF08223.11 CTQ28643.1 - 0.034 14.4 0.0 0.046 14.0 0.0 1.3 1 0 0 1 1 1 0 PaaX-like protein C-terminal domain NTP_transferase PF00483.23 CTQ28644.1 - 1.7e-26 93.3 0.0 2.2e-26 93.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 CTQ28644.1 - 2.3e-07 31.3 0.0 3.4e-07 30.7 0.0 1.4 1 1 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 CTQ28644.1 - 0.0034 17.2 0.0 0.0094 15.7 0.0 1.7 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 CTQ28644.1 - 0.029 14.3 0.1 0.044 13.7 0.1 1.2 1 0 0 1 1 1 0 Cytidylyltransferase 3HCDH_N PF02737.18 CTQ28644.1 - 0.092 12.6 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF4833 PF16117.5 CTQ28644.1 - 0.11 12.5 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4833) Response_reg PF00072.24 CTQ28645.1 - 9.2e-30 103.1 0.1 1.6e-29 102.3 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain BRCT_3 PF18428.1 CTQ28645.1 - 0.17 11.9 0.0 0.31 11.1 0.0 1.5 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain Patatin PF01734.22 CTQ28646.1 - 9.8e-24 84.7 0.9 3.2e-23 83.0 0.9 1.8 1 1 0 1 1 1 1 Patatin-like phospholipase PriC PF07445.12 CTQ28646.1 - 0.16 11.9 0.3 0.28 11.1 0.3 1.3 1 0 0 1 1 1 0 Primosomal replication protein priC UPF0225 PF17775.1 CTQ28647.1 - 2.9e-31 108.2 0.0 3.4e-31 108.0 0.0 1.1 1 0 0 1 1 1 1 UPF0225 domain SEC-C PF02810.15 CTQ28647.1 - 2.1e-17 62.7 22.7 6.4e-11 42.0 11.5 2.2 2 0 0 2 2 2 2 SEC-C motif CW_binding_1 PF01473.20 CTQ28647.1 - 0.0044 17.3 0.4 0.0098 16.2 0.4 1.6 1 0 0 1 1 1 1 Putative cell wall binding repeat Formyl_trans_N PF00551.19 CTQ28648.1 - 1.5e-54 184.5 0.0 1.8e-54 184.2 0.0 1.1 1 0 0 1 1 1 1 Formyl transferase ACT PF01842.25 CTQ28648.1 - 2.7e-08 33.4 0.0 5.8e-08 32.4 0.0 1.6 1 0 0 1 1 1 1 ACT domain HTH_24 PF13412.6 CTQ28650.1 - 2.3e-15 55.9 0.5 4.9e-15 54.8 0.2 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 CTQ28650.1 - 4.5e-14 52.0 1.8 5.9e-14 51.6 0.8 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 CTQ28650.1 - 2.9e-11 43.2 0.0 4.6e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_20 PF12840.7 CTQ28650.1 - 0.00021 21.3 0.1 0.00045 20.2 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 CTQ28650.1 - 0.00043 20.2 0.0 0.00082 19.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 CTQ28650.1 - 0.00088 19.7 0.1 0.0042 17.5 0.1 2.0 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 CTQ28650.1 - 0.0019 17.9 0.2 0.0046 16.7 0.2 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 CTQ28650.1 - 0.0026 17.6 0.7 0.0047 16.8 0.7 1.6 1 1 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 CTQ28650.1 - 0.0075 16.2 0.3 0.016 15.2 0.1 1.6 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain LexA_DNA_bind PF01726.16 CTQ28650.1 - 0.017 14.9 0.0 0.03 14.1 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain DUF294_C PF10335.9 CTQ28650.1 - 0.021 14.6 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase substrate binding domain DUF620 PF04788.12 CTQ28650.1 - 0.066 12.6 0.0 0.088 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF620) DUF501 PF04417.12 CTQ28650.1 - 0.097 12.5 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF501) RuvB_C PF05491.13 CTQ28650.1 - 0.18 11.7 0.0 0.37 10.7 0.0 1.5 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain DDRGK PF09756.9 CTQ28650.1 - 0.24 11.0 0.0 0.42 10.2 0.0 1.4 1 0 0 1 1 1 0 DDRGK domain EamA PF00892.20 CTQ28651.1 - 9.9e-30 103.5 43.3 6e-17 62.1 14.0 2.0 2 0 0 2 2 2 2 EamA-like transporter family Adipogenin PF15202.6 CTQ28651.1 - 5.3 7.1 7.4 3.7 7.7 1.1 2.7 2 0 0 2 2 2 0 Adipogenin Nitrate_red_gam PF02665.14 CTQ28652.1 - 3.6e-79 265.4 9.2 4e-79 265.2 9.2 1.0 1 0 0 1 1 1 1 Nitrate reductase gamma subunit Nitrate_red_del PF02613.15 CTQ28653.1 - 2.9e-11 43.5 3.4 2.9e-11 43.5 3.4 1.8 1 1 1 2 2 2 1 Nitrate reductase delta subunit Fer4_11 PF13247.6 CTQ28654.1 - 9.8e-38 128.3 5.7 2.2e-37 127.2 5.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Nitr_red_bet_C PF14711.6 CTQ28654.1 - 2.7e-30 103.9 0.0 4.8e-30 103.1 0.0 1.4 1 0 0 1 1 1 1 Respiratory nitrate reductase beta C-terminal Fer4_7 PF12838.7 CTQ28654.1 - 4.9e-09 36.6 15.9 8.4e-06 26.3 4.7 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ28654.1 - 1.3e-08 34.8 15.8 1.2e-05 25.3 4.1 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ28654.1 - 7.5e-06 25.8 19.7 0.0028 17.7 0.2 3.9 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 CTQ28654.1 - 0.00049 20.2 17.9 0.01 15.9 4.7 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 CTQ28654.1 - 0.0098 15.9 22.7 0.014 15.5 1.9 4.0 4 0 0 4 4 3 3 4Fe-4S binding domain Fer4 PF00037.27 CTQ28654.1 - 0.016 15.0 2.0 0.016 15.0 2.0 4.8 5 0 0 5 5 4 0 4Fe-4S binding domain Fer4_15 PF13459.6 CTQ28654.1 - 0.021 15.5 7.9 1.2 9.9 0.1 3.5 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 CTQ28654.1 - 0.047 14.2 9.2 0.048 14.2 0.1 3.5 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 CTQ28654.1 - 0.058 13.9 14.3 1.2 9.8 0.1 4.0 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 CTQ28654.1 - 0.082 13.1 21.8 0.091 12.9 1.1 3.1 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ28654.1 - 0.25 11.8 0.2 0.25 11.8 0.2 3.8 3 1 1 4 4 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ28654.1 - 2.2 9.0 24.5 1 10.1 0.9 3.9 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 CTQ28654.1 - 3.4 8.7 15.8 66 4.6 0.2 3.9 2 1 0 2 2 2 0 4Fe-4S double cluster binding domain Molybdopterin PF00384.22 CTQ28655.1 - 2.1e-189 630.0 0.0 3.7e-189 629.2 0.0 1.4 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ28655.1 - 2.2e-24 85.6 0.1 1.6e-22 79.6 0.0 2.5 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Nitr_red_alph_N PF14710.6 CTQ28655.1 - 3.1e-17 62.7 4.0 9.1e-17 61.2 4.0 1.9 1 0 0 1 1 1 1 Respiratory nitrate reductase alpha N-terminal Molybdop_Fe4S4 PF04879.16 CTQ28655.1 - 0.0053 16.7 0.1 0.013 15.5 0.1 1.6 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain MFS_1 PF07690.16 CTQ28656.1 - 1.4e-14 53.8 62.9 1.4e-14 53.8 62.9 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily HisKA_3 PF07730.13 CTQ28657.1 - 1.4e-18 67.2 2.9 1.9e-18 66.7 0.6 2.6 2 0 0 2 2 2 1 Histidine kinase HATPase_c PF02518.26 CTQ28657.1 - 2.8e-11 43.9 0.8 9.8e-11 42.2 0.1 2.4 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 CTQ28657.1 - 6.4e-11 42.5 1.3 1.8e-10 41.1 0.5 2.2 2 0 0 2 2 2 1 HAMP domain PilJ PF13675.6 CTQ28657.1 - 2.3e-09 37.3 3.5 2.3e-09 37.3 3.5 4.0 4 1 1 5 5 5 1 Type IV pili methyl-accepting chemotaxis transducer N-term HATPase_c_2 PF13581.6 CTQ28657.1 - 0.0001 22.2 0.0 0.00027 20.9 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 CTQ28657.1 - 0.00064 19.6 0.0 0.002 18.0 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NES_C_h PF18208.1 CTQ28657.1 - 0.0062 16.8 1.2 0.023 14.9 0.2 2.2 2 0 0 2 2 2 1 Nicking enzyme C-terminal middle helical domain Spectrin PF00435.21 CTQ28657.1 - 5.7 7.5 11.0 5.3 7.6 5.6 3.2 2 1 0 2 2 2 0 Spectrin repeat Response_reg PF00072.24 CTQ28658.1 - 8.2e-31 106.5 0.1 1.3e-30 105.9 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 CTQ28658.1 - 3.9e-23 80.7 0.4 8.7e-23 79.6 0.4 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 CTQ28658.1 - 4.2e-10 39.2 0.5 8.4e-10 38.2 0.1 1.7 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 CTQ28658.1 - 4.8e-07 29.2 0.2 1.7e-06 27.5 0.2 2.0 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 CTQ28658.1 - 7.8e-06 25.6 0.3 3.7e-05 23.4 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 CTQ28658.1 - 0.00011 21.7 0.1 0.0003 20.3 0.1 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 CTQ28658.1 - 0.00019 21.1 0.1 0.00053 19.7 0.0 1.9 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 CTQ28658.1 - 0.0073 16.4 0.1 0.025 14.7 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_20 PF12840.7 CTQ28658.1 - 0.0089 16.1 0.1 0.027 14.5 0.0 1.9 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_7 PF02796.15 CTQ28658.1 - 0.016 15.2 0.0 0.036 14.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase MarR_2 PF12802.7 CTQ28658.1 - 0.025 14.4 0.0 0.068 13.1 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_29 PF13551.6 CTQ28658.1 - 0.039 14.0 0.0 0.12 12.4 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn helix CENP-B_N PF04218.13 CTQ28658.1 - 0.047 13.3 0.4 0.081 12.6 0.4 1.4 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain HTH_11 PF08279.12 CTQ28658.1 - 0.059 13.3 0.2 0.23 11.4 0.2 2.1 1 0 0 1 1 1 0 HTH domain HTH_40 PF14493.6 CTQ28658.1 - 0.12 12.8 0.2 0.32 11.5 0.1 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain IAT_beta PF11924.8 CTQ28659.1 - 8.9e-100 333.6 2.0 1.1e-99 333.3 2.0 1.1 1 0 0 1 1 1 1 Inverse autotransporter, beta-domain Molybdopterin PF00384.22 CTQ28660.1 - 1.8e-79 267.8 0.0 2.5e-79 267.3 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ28660.1 - 3.4e-26 91.4 0.1 7.2e-26 90.4 0.1 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 CTQ28660.1 - 3.3e-19 68.6 1.3 3.3e-19 68.6 1.3 1.8 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain Fer2_BFD PF04324.15 CTQ28660.1 - 1.9e-10 40.9 2.0 4e-10 39.9 2.0 1.6 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain Pyr_redox_2 PF07992.14 CTQ28661.1 - 2.2e-94 316.0 0.2 3.2e-47 161.2 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ28661.1 - 4.8e-31 107.2 5.8 1.5e-14 54.3 0.0 4.2 5 0 0 5 5 3 2 Pyridine nucleotide-disulphide oxidoreductase Rieske_2 PF13806.6 CTQ28661.1 - 5.5e-30 103.4 0.0 1.3e-29 102.2 0.0 1.7 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Rubredoxin_C PF18267.1 CTQ28661.1 - 4.2e-26 90.7 0.0 1.5e-11 44.0 0.0 2.7 2 0 0 2 2 2 2 Rubredoxin NAD+ reductase C-terminal domain NIR_SIR PF01077.22 CTQ28661.1 - 6.5e-18 64.7 0.0 1.1e-17 64.0 0.0 1.4 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Fer2_BFD PF04324.15 CTQ28661.1 - 2.7e-17 62.9 4.6 3.6e-10 40.0 4.7 2.7 2 0 0 2 2 2 2 BFD-like [2Fe-2S] binding domain Pyr_redox_3 PF13738.6 CTQ28661.1 - 8.2e-14 51.5 0.0 2.2e-06 27.1 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR_ferr PF03460.17 CTQ28661.1 - 9.2e-11 41.4 0.0 2.3e-10 40.2 0.0 1.7 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain DAO PF01266.24 CTQ28661.1 - 7.7e-08 32.3 13.7 0.052 13.1 2.5 5.4 5 1 1 6 6 6 3 FAD dependent oxidoreductase GIDA PF01134.22 CTQ28661.1 - 3e-07 29.9 9.4 0.036 13.2 2.5 4.0 3 1 1 4 4 4 2 Glucose inhibited division protein A HI0933_like PF03486.14 CTQ28661.1 - 5.5e-06 25.3 4.3 5.1 5.7 0.8 5.9 6 1 1 7 7 7 1 HI0933-like protein NAD_binding_8 PF13450.6 CTQ28661.1 - 1.4e-05 25.2 3.3 0.06 13.6 0.9 3.0 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 CTQ28661.1 - 2.3e-05 23.8 6.7 0.036 13.4 0.1 2.5 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Amino_oxidase PF01593.24 CTQ28661.1 - 6e-05 22.5 0.1 0.044 13.1 0.0 2.8 3 0 0 3 3 3 2 Flavin containing amine oxidoreductase K_oxygenase PF13434.6 CTQ28661.1 - 0.00011 21.5 0.0 0.13 11.3 0.0 3.5 4 0 0 4 4 4 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 CTQ28661.1 - 0.00077 19.5 19.7 0.94 9.5 0.0 6.6 6 1 1 7 7 7 2 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 CTQ28661.1 - 0.0035 17.8 3.7 5.9 7.4 0.0 3.7 4 0 0 4 4 3 1 Putative NAD(P)-binding FAD_binding_2 PF00890.24 CTQ28661.1 - 0.12 11.4 17.5 0.35 9.9 1.5 4.1 3 1 1 4 4 4 0 FAD binding domain 3HCDH_N PF02737.18 CTQ28661.1 - 0.16 11.8 4.7 3 7.7 0.2 2.6 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 CTQ28661.1 - 0.31 11.3 2.5 84 3.5 0.1 4.3 5 0 0 5 5 5 0 TrkA-N domain AdoHcyase_NAD PF00670.21 CTQ28661.1 - 0.33 11.0 2.0 1.8 8.6 0.3 2.4 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FAD_oxidored PF12831.7 CTQ28661.1 - 0.39 10.0 8.0 5.8 6.1 3.7 2.6 2 0 0 2 2 2 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 CTQ28661.1 - 1.5 8.0 10.5 1.3 8.2 0.6 2.4 2 0 0 2 2 2 0 FAD binding domain ABC_tran PF00005.27 CTQ28662.1 - 8.2e-33 113.8 0.0 1.3e-32 113.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 CTQ28662.1 - 7.2e-05 22.7 0.1 0.00015 21.7 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 CTQ28662.1 - 0.00025 21.5 0.0 0.00041 20.8 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 CTQ28662.1 - 0.00041 20.2 0.1 0.61 9.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ28662.1 - 0.00069 19.3 0.7 0.0021 17.8 0.2 2.0 1 1 1 2 2 2 1 P-loop containing region of AAA domain AAA PF00004.29 CTQ28662.1 - 0.00092 19.6 0.1 0.0095 16.4 0.1 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 CTQ28662.1 - 0.011 15.9 0.8 0.16 12.1 0.8 2.3 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 CTQ28662.1 - 0.013 15.6 0.2 0.049 13.7 0.1 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase ABC_ATPase PF09818.9 CTQ28662.1 - 0.02 13.7 1.2 0.047 12.5 0.1 2.1 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA_23 PF13476.6 CTQ28662.1 - 0.023 15.2 0.3 0.036 14.5 0.3 1.3 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ28662.1 - 0.065 12.8 1.3 0.11 12.0 0.0 2.0 3 0 0 3 3 3 0 AAA domain ATP-synt_ab PF00006.25 CTQ28662.1 - 0.088 12.5 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_22 PF13401.6 CTQ28662.1 - 0.099 12.9 1.3 0.36 11.1 0.8 2.4 2 1 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 CTQ28662.1 - 0.1 12.9 0.1 1.1 9.5 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Dynamin_N PF00350.23 CTQ28662.1 - 0.12 12.4 0.0 0.26 11.3 0.0 1.6 1 0 0 1 1 1 0 Dynamin family FeoB_N PF02421.18 CTQ28662.1 - 0.18 11.3 0.6 0.28 10.7 0.1 1.5 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA_15 PF13175.6 CTQ28662.1 - 0.2 11.3 0.1 0.28 10.8 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 CTQ28662.1 - 0.2 11.5 0.1 2.6 7.9 0.0 2.2 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_5 PF07728.14 CTQ28662.1 - 0.23 11.5 1.8 1.1 9.2 0.2 2.8 2 1 2 4 4 4 0 AAA domain (dynein-related subfamily) G-alpha PF00503.20 CTQ28662.1 - 0.25 10.5 0.1 0.33 10.1 0.1 1.4 1 1 0 1 1 1 0 G-protein alpha subunit SMC_N PF02463.19 CTQ28662.1 - 0.26 10.7 0.3 13 5.2 0.1 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 CTQ28662.1 - 0.33 10.9 1.2 0.41 10.6 0.2 1.7 2 0 0 2 2 2 0 NACHT domain BPD_transp_1 PF00528.22 CTQ28663.1 - 2e-20 73.3 16.5 2e-20 73.3 16.5 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF5359 PF17313.2 CTQ28663.1 - 0.093 12.7 0.9 0.22 11.5 0.9 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5359) LPAM_1 PF08139.12 CTQ28663.1 - 0.29 11.7 0.1 0.29 11.7 0.1 3.5 5 0 0 5 5 5 0 Prokaryotic membrane lipoprotein lipid attachment site NMT1_2 PF13379.6 CTQ28664.1 - 9.8e-105 349.8 0.1 1.3e-104 349.4 0.1 1.1 1 0 0 1 1 1 1 NMT1-like family TAT_signal PF10518.9 CTQ28664.1 - 7.3e-05 22.5 1.5 0.00023 20.9 1.5 1.9 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence NMT1 PF09084.11 CTQ28664.1 - 0.0019 18.2 0.0 0.014 15.3 0.0 2.0 2 0 0 2 2 2 1 NMT1/THI5 like NIT PF08376.10 CTQ28665.1 - 8.7e-44 150.7 1.2 8.7e-44 150.7 1.2 2.4 3 0 0 3 3 3 1 Nitrate and nitrite sensing ANTAR PF03861.14 CTQ28665.1 - 1.2e-18 66.6 5.1 5.7e-18 64.5 5.1 2.2 1 0 0 1 1 1 1 ANTAR domain DUF2203 PF09969.9 CTQ28665.1 - 0.39 11.4 4.3 0.89 10.3 1.3 2.8 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2203) DrsE PF02635.15 CTQ28666.1 - 1.2e-22 80.5 0.1 1.3e-22 80.3 0.1 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DUF1883 PF08980.10 CTQ28667.1 - 2.8e-06 27.2 0.0 1.9e-05 24.5 0.0 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF1883) ChaC PF04752.12 CTQ28668.1 - 3.1e-53 180.5 0.0 3.8e-53 180.2 0.0 1.1 1 0 0 1 1 1 1 ChaC-like protein GGACT PF06094.12 CTQ28668.1 - 0.0036 17.9 0.0 0.0054 17.3 0.0 1.2 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like ChaB PF06150.12 CTQ28669.1 - 8.7e-28 96.7 6.7 1e-27 96.4 6.7 1.1 1 0 0 1 1 1 1 ChaB Na_Ca_ex PF01699.24 CTQ28670.1 - 1.2e-22 80.5 39.2 9.5e-15 54.9 17.3 2.2 2 0 0 2 2 2 2 Sodium/calcium exchanger protein DAHP_synth_1 PF00793.20 CTQ28671.1 - 7.5e-69 231.6 0.0 8.7e-69 231.4 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family Transglut_core2 PF13369.6 CTQ28672.1 - 6.2e-40 136.3 0.0 8.4e-40 135.9 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily TPR_9 PF13371.6 CTQ28672.1 - 1.9e-25 88.8 1.0 1.9e-25 88.8 1.0 2.2 3 0 0 3 3 3 1 Tetratricopeptide repeat SirB PF04247.12 CTQ28673.1 - 2.3e-40 137.4 6.1 2.6e-40 137.3 6.1 1.0 1 0 0 1 1 1 1 Invasion gene expression up-regulator, SirB DUF2339 PF10101.9 CTQ28673.1 - 0.00047 18.9 7.5 0.00055 18.7 7.5 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2339) Ac76 PF05814.11 CTQ28673.1 - 0.11 12.5 1.0 0.24 11.4 1.0 1.5 1 0 0 1 1 1 0 Orf76 (Ac76) DUF2981 PF11200.8 CTQ28673.1 - 0.21 11.3 0.8 0.31 10.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) DUF3488 PF11992.8 CTQ28673.1 - 3 6.7 10.6 0.59 9.0 3.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3488) Methyltransf_31 PF13847.6 CTQ28674.1 - 1.5e-21 76.8 0.0 2.1e-21 76.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmC_N PF17827.1 CTQ28674.1 - 3e-19 69.4 2.2 4.7e-19 68.8 1.1 1.9 2 0 0 2 2 1 1 PrmC N-terminal domain MTS PF05175.14 CTQ28674.1 - 1.6e-16 60.3 0.1 1.1e-15 57.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_25 PF13649.6 CTQ28674.1 - 1.1e-09 38.9 0.1 6.4e-09 36.4 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ28674.1 - 4.2e-07 29.9 0.0 4e-06 26.8 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 CTQ28674.1 - 5.4e-07 29.2 0.0 8.4e-07 28.6 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_11 PF08241.12 CTQ28674.1 - 8.4e-07 29.6 0.0 1.4e-05 25.6 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ28674.1 - 6.8e-06 26.7 0.0 4.7e-05 24.1 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 CTQ28674.1 - 9.4e-05 21.9 0.0 0.00013 21.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.18 CTQ28674.1 - 0.00015 21.5 0.0 0.00024 20.8 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_16 PF10294.9 CTQ28674.1 - 0.00019 21.2 0.0 0.00027 20.7 0.0 1.2 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_15 PF09445.10 CTQ28674.1 - 0.00024 20.7 0.0 0.00035 20.2 0.0 1.1 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 CTQ28674.1 - 0.00035 20.3 0.0 0.0007 19.3 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PCMT PF01135.19 CTQ28674.1 - 0.00041 20.2 0.0 0.00058 19.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_2 PF00891.18 CTQ28674.1 - 0.0013 18.0 0.0 0.0045 16.3 0.0 1.8 2 0 0 2 2 2 1 O-methyltransferase domain Methyltransf_32 PF13679.6 CTQ28674.1 - 0.0068 16.4 0.0 0.0096 15.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 CTQ28674.1 - 0.011 15.7 0.0 0.02 14.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 CTQ28674.1 - 0.014 14.9 0.0 0.023 14.1 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB GATase_4 PF13230.6 CTQ28674.1 - 0.046 12.6 0.0 0.062 12.2 0.0 1.2 1 0 0 1 1 1 0 Glutamine amidotransferases class-II Ubie_methyltran PF01209.18 CTQ28674.1 - 0.09 12.1 0.0 0.3 10.4 0.0 1.7 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family Methyltransf_3 PF01596.17 CTQ28674.1 - 0.1 11.8 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase PCRF PF03462.18 CTQ28675.1 - 8.7e-76 254.1 0.4 8.7e-76 254.1 0.4 1.6 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 CTQ28675.1 - 3.5e-40 136.6 0.3 3.5e-40 136.6 0.3 2.0 3 0 0 3 3 3 1 RF-1 domain HR1 PF02185.16 CTQ28675.1 - 0.0049 17.0 0.6 0.012 15.7 0.6 1.7 1 0 0 1 1 1 1 Hr1 repeat ABC_tran_CTD PF16326.5 CTQ28675.1 - 0.0059 16.8 0.8 0.0059 16.8 0.8 2.8 1 1 1 2 2 2 1 ABC transporter C-terminal domain GlutR_N PF05201.15 CTQ28676.1 - 9.5e-52 174.6 0.0 2.6e-51 173.2 0.0 1.8 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.20 CTQ28676.1 - 2e-50 170.4 0.9 4.3e-50 169.4 0.9 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.20 CTQ28676.1 - 1.5e-24 86.3 3.4 1.5e-24 86.3 3.4 2.1 2 0 0 2 2 2 1 Glutamyl-tRNAGlu reductase, dimerisation domain OCD_Mu_crystall PF02423.15 CTQ28676.1 - 1.3e-06 27.6 0.8 2.9e-06 26.4 0.8 1.5 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family F420_oxidored PF03807.17 CTQ28676.1 - 1.3e-05 25.7 0.9 8.4e-05 23.1 0.8 2.5 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 CTQ28676.1 - 0.00058 20.1 1.6 0.0014 18.9 0.2 2.4 3 1 0 3 3 3 1 Saccharopine dehydrogenase NADP binding domain GFO_IDH_MocA PF01408.22 CTQ28676.1 - 0.0057 17.5 0.8 0.025 15.4 0.1 2.3 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold UPF0181 PF03701.14 CTQ28676.1 - 0.025 14.2 0.0 0.15 11.7 0.0 2.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0181) T2SSF PF00482.23 CTQ28676.1 - 0.86 9.6 4.7 0.62 10.0 1.0 2.4 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein F DUF3323 PF11796.8 CTQ28676.1 - 1.6 8.5 10.0 0.12 12.3 2.8 2.6 3 1 0 3 3 3 0 Protein of unknown function N-terminus (DUF3323) LolB PF03550.14 CTQ28677.1 - 1.2e-47 161.8 0.8 1.4e-47 161.5 0.8 1.1 1 0 0 1 1 1 1 Outer membrane lipoprotein LolB DUF4292 PF14125.6 CTQ28677.1 - 0.00049 19.8 0.0 0.48 10.1 0.0 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4292) DUF3261 PF11659.8 CTQ28677.1 - 0.0045 16.8 0.4 0.0059 16.5 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3261) GHMP_kinases_N PF00288.26 CTQ28678.1 - 2.5e-11 43.6 0.3 5e-11 42.7 0.3 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 CTQ28678.1 - 4.2e-06 27.0 0.0 7.6e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 GHMP kinases C terminal Pribosyltran_N PF13793.6 CTQ28679.1 - 3.6e-50 168.8 0.1 2.3e-49 166.2 0.0 2.2 2 1 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 CTQ28679.1 - 5.3e-31 108.1 0.7 9.6e-31 107.2 0.7 1.5 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 CTQ28679.1 - 8.8e-19 67.6 2.1 1.1e-18 67.2 0.4 1.9 3 0 0 3 3 3 1 Phosphoribosyl transferase domain UPRTase PF14681.6 CTQ28679.1 - 0.0045 16.5 0.0 0.0072 15.8 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 CTQ28679.1 - 0.13 11.7 0.0 0.24 10.9 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosyl transferase Sulfate_transp PF00916.20 CTQ28680.1 - 1.3e-76 257.9 26.1 1.3e-76 257.9 26.1 1.4 2 0 0 2 2 2 1 Sulfate permease family STAS PF01740.21 CTQ28680.1 - 2.5e-11 43.2 0.0 3.9e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 STAS domain MerR_1 PF13411.6 CTQ28681.1 - 4.2e-19 68.4 0.2 1.5e-18 66.6 0.1 2.0 2 0 0 2 2 2 1 MerR HTH family regulatory protein TipAS PF07739.13 CTQ28681.1 - 1.4e-14 54.6 4.2 9.6e-08 32.6 0.3 2.5 2 1 0 2 2 2 2 TipAS antibiotic-recognition domain MerR PF00376.23 CTQ28681.1 - 1.7e-14 53.3 0.5 8.7e-14 51.0 0.3 2.3 2 0 0 2 2 2 1 MerR family regulatory protein MerR-DNA-bind PF09278.11 CTQ28681.1 - 3.1e-05 24.4 4.2 3.1e-05 24.4 4.2 3.8 3 1 1 4 4 4 1 MerR, DNA binding HTH_31 PF13560.6 CTQ28681.1 - 0.0015 18.9 3.9 0.3 11.5 0.1 3.5 3 1 0 3 3 3 2 Helix-turn-helix domain Myb_DNA-bind_5 PF13873.6 CTQ28681.1 - 0.013 15.5 0.1 3.2 7.9 0.1 2.6 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain WHIM1 PF15612.6 CTQ28681.1 - 0.091 12.3 0.0 0.24 11.0 0.0 1.8 1 0 0 1 1 1 0 WSTF, HB1, Itc1p, MBD9 motif 1 HTH_23 PF13384.6 CTQ28681.1 - 0.11 12.3 2.5 0.46 10.4 0.1 3.0 3 0 0 3 3 3 0 Homeodomain-like domain DUF2583 PF10762.9 CTQ28682.1 - 1.6e-47 159.9 0.8 1.8e-47 159.7 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2583) CPP1-like PF11833.8 CTQ28682.1 - 0.018 14.7 1.7 0.022 14.4 1.7 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF5134 PF17197.4 CTQ28682.1 - 0.11 12.3 0.9 0.14 12.0 0.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5134) DUF4282 PF14110.6 CTQ28682.1 - 0.22 12.3 3.1 0.28 11.9 3.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) Pept_tRNA_hydro PF01195.19 CTQ28683.1 - 7e-56 188.9 0.0 7.9e-56 188.7 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase YchF-GTPase_C PF06071.13 CTQ28684.1 - 4.3e-40 135.8 0.8 1e-39 134.6 0.3 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 CTQ28684.1 - 1.2e-21 76.9 0.0 2.6e-21 75.8 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CTQ28684.1 - 4.7e-09 36.0 0.0 3.1e-08 33.3 0.0 2.1 2 0 0 2 2 2 1 Ferrous iron transport protein B TGS PF02824.21 CTQ28684.1 - 0.032 14.3 0.6 0.2 11.7 0.2 2.5 2 1 0 2 2 2 0 TGS domain DUF1869 PF08956.10 CTQ28685.1 - 0.00011 22.0 0.0 0.0002 21.2 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1869) Peripla_BP_4 PF13407.6 CTQ28686.1 - 3e-51 174.5 12.1 3.4e-51 174.3 12.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ28686.1 - 5.2e-13 49.1 1.7 5.7e-13 48.9 1.7 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_6 PF13458.6 CTQ28686.1 - 1.6e-05 24.8 5.5 5e-05 23.1 4.6 1.8 1 1 1 2 2 2 1 Periplasmic binding protein Peripla_BP_3 PF13377.6 CTQ28686.1 - 0.00084 19.7 0.2 0.0044 17.3 0.0 2.2 2 1 0 2 2 2 1 Periplasmic binding protein-like domain ANF_receptor PF01094.28 CTQ28686.1 - 0.0017 17.6 0.0 0.013 14.6 0.0 2.1 2 0 0 2 2 2 1 Receptor family ligand binding region PGM_PMM_I PF02878.16 CTQ28686.1 - 0.095 12.4 0.3 2.4 7.9 0.0 2.6 2 1 1 3 3 3 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VasL PF12486.8 CTQ28687.1 - 2.5e-53 179.9 13.2 7e-52 175.2 8.5 2.4 2 0 0 2 2 2 2 Type VI secretion system, EvfB, or VasL ImpA_N PF06812.12 CTQ28687.1 - 2.7e-20 72.7 2.4 4.7e-20 71.9 0.1 2.5 2 1 1 3 3 3 1 ImpA, N-terminal, type VI secretion system DHR10 PF18595.1 CTQ28687.1 - 0.13 12.3 0.7 0.55 10.3 0.1 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain GlnD_UR_UTase PF08335.11 CTQ28687.1 - 0.94 9.6 8.8 1.1 9.4 0.8 2.3 2 0 0 2 2 2 0 GlnD PII-uridylyltransferase GPW_gp25 PF04965.14 CTQ28688.1 - 3.2e-11 42.8 0.0 4.4e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 Gene 25-like lysozyme T6SS-SciN PF12790.7 CTQ28689.1 - 3.6e-33 113.8 0.2 4.5e-33 113.5 0.2 1.1 1 0 0 1 1 1 1 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 Lyx_isomer PF07385.12 CTQ28689.1 - 0.028 13.7 0.0 0.039 13.2 0.0 1.1 1 0 0 1 1 1 0 D-lyxose isomerase DUF1363 PF07101.11 CTQ28689.1 - 0.18 12.1 0.0 0.26 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1363) LPAM_1 PF08139.12 CTQ28689.1 - 0.4 11.3 0.2 0.4 11.3 0.2 1.9 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site LPAM_2 PF13627.6 CTQ28689.1 - 0.49 10.3 2.1 0.92 9.4 2.1 1.5 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site T6SS_TssG PF06996.11 CTQ28690.1 - 5.4e-75 252.4 0.0 6.3e-75 252.2 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion, TssG T6SS_TssF PF05947.12 CTQ28691.1 - 7.5e-186 619.2 0.1 8.4e-186 619.1 0.1 1.0 1 0 0 1 1 1 1 Type VI secretion system, TssF IcmF-related PF06761.12 CTQ28692.1 - 7.2e-72 242.5 17.6 1.9e-71 241.1 17.6 1.8 1 0 0 1 1 1 1 Intracellular multiplication and human macrophage-killing IcmF_C PF06744.12 CTQ28692.1 - 8.7e-52 175.7 2.3 2.5e-51 174.2 2.3 1.8 1 0 0 1 1 1 1 Type VI secretion protein IcmF C-terminal zf_Hakai PF18408.1 CTQ28693.1 - 0.071 12.8 0.4 0.13 12.0 0.4 1.4 1 0 0 1 1 1 0 C2H2 Hakai zinc finger domain PAAR_motif PF05488.13 CTQ28694.1 - 2.4e-22 78.9 7.4 2.7e-22 78.7 7.4 1.0 1 0 0 1 1 1 1 PAAR motif SBP_bac_1 PF01547.25 CTQ28696.1 - 0.091 12.7 0.0 0.091 12.7 0.0 1.0 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein FGE-sulfatase PF03781.16 CTQ28698.1 - 3.4e-36 125.1 0.0 6.8e-36 124.2 0.0 1.4 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 FGE-sulfatase PF03781.16 CTQ28699.1 - 7.5e-37 127.3 0.0 2.1e-36 125.9 0.0 1.5 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 FGE-sulfatase PF03781.16 CTQ28700.1 - 1.1e-37 130.1 0.0 1.2e-37 129.9 0.0 1.1 1 0 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 HALZ PF02183.18 CTQ28701.1 - 0.013 15.7 0.2 0.035 14.3 0.2 1.6 1 0 0 1 1 1 0 Homeobox associated leucine zipper Phage_GPD PF05954.11 CTQ28702.1 - 5.6e-68 229.5 4.3 6.3e-68 229.3 3.4 1.5 2 0 0 2 2 2 1 Phage late control gene D protein (GPD) DUF2345 PF10106.9 CTQ28702.1 - 1.1e-54 184.5 5.1 2.1e-54 183.5 5.1 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2345) T6SS_Vgr PF13296.6 CTQ28702.1 - 3.9e-33 113.8 0.6 1.1e-32 112.3 0.6 1.9 1 0 0 1 1 1 1 Putative type VI secretion system Rhs element Vgr Sarcoglycan_1 PF04790.13 CTQ28702.1 - 0.0092 15.4 0.8 0.092 12.1 0.1 2.6 2 1 1 3 3 3 1 Sarcoglycan complex subunit protein Cthe_2159 PF14262.6 CTQ28702.1 - 0.14 11.5 2.4 0.25 10.7 1.8 1.7 1 1 0 1 1 1 0 Carbohydrate-binding domain-containing protein Cthe_2159 Sugarporin_N PF11471.8 CTQ28702.1 - 0.22 11.5 2.6 0.56 10.2 2.6 1.7 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension OmpA PF00691.20 CTQ28703.1 - 5.5e-19 68.4 0.0 1e-18 67.5 0.0 1.5 1 0 0 1 1 1 1 OmpA family UbiA PF01040.18 CTQ28703.1 - 0.51 9.6 4.6 0.45 9.8 1.0 2.1 2 0 0 2 2 2 0 UbiA prenyltransferase family DUF4131 PF13567.6 CTQ28703.1 - 2.1 8.0 5.6 1.6 8.3 3.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DotU PF09850.9 CTQ28704.1 - 2.2e-40 138.6 2.5 2.8e-40 138.3 2.5 1.0 1 0 0 1 1 1 1 Type VI secretion system protein DotU SfLAP PF11139.8 CTQ28704.1 - 0.023 14.1 1.0 0.035 13.5 1.0 1.3 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein DUF2849 PF11011.8 CTQ28704.1 - 0.33 11.7 2.9 2 9.2 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2849) T6SS_VasE PF05936.12 CTQ28705.1 - 1.2e-133 445.9 7.3 1.4e-133 445.7 7.3 1.0 1 0 0 1 1 1 1 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE GGACT PF06094.12 CTQ28706.1 - 2.3e-16 60.5 0.0 2.6e-16 60.3 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 CTQ28706.1 - 0.021 15.2 0.0 0.025 14.9 0.0 1.2 1 0 0 1 1 1 0 AIG2-like family DUF2058 PF09831.9 CTQ28707.1 - 4e-59 199.7 12.0 4.6e-59 199.5 12.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2058) Dynactin_p62 PF05502.13 CTQ28707.1 - 0.052 12.3 2.8 0.053 12.3 2.8 1.1 1 0 0 1 1 1 0 Dynactin p62 family DUF2229 PF09989.9 CTQ28707.1 - 0.18 11.4 2.0 0.28 10.8 2.0 1.3 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) EMC3_TMCO1 PF01956.16 CTQ28707.1 - 1.9 8.2 9.3 3.4 7.4 9.3 1.4 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like PseudoU_synth_2 PF00849.22 CTQ28708.1 - 2.3e-26 92.8 0.0 3.2e-26 92.3 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase CSD PF00313.22 CTQ28709.1 - 5.2e-09 35.8 0.1 8e-09 35.2 0.1 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain LysR_substrate PF03466.20 CTQ28710.1 - 7.5e-43 146.3 0.7 9.5e-43 146.0 0.7 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28710.1 - 1.1e-19 70.1 0.2 2.5e-19 69.0 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family PBP_like PF12727.7 CTQ28710.1 - 3.7e-05 22.9 0.0 0.0018 17.4 0.0 2.4 2 1 0 2 2 2 1 PBP superfamily domain HTH_50 PF18024.1 CTQ28710.1 - 0.00074 19.1 0.3 0.0028 17.2 0.0 2.1 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_30 PF13556.6 CTQ28710.1 - 0.08 12.7 0.6 0.21 11.4 0.3 1.9 1 1 1 2 2 2 0 PucR C-terminal helix-turn-helix domain SBP_bac_11 PF13531.6 CTQ28711.1 - 1.4e-39 136.2 2.1 1.7e-39 135.9 2.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ28711.1 - 0.00019 21.5 0.0 0.34 10.8 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein Sugar_tr PF00083.24 CTQ28712.1 - 7.5e-33 114.1 37.6 7.3e-24 84.4 11.2 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 CTQ28712.1 - 1.2e-30 106.6 82.8 1.6e-24 86.5 51.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily PGF-CTERM PF18204.1 CTQ28712.1 - 0.2 11.6 3.6 0.45 10.6 0.2 3.4 2 0 0 2 2 2 0 PGF-CTERM motif LysR_substrate PF03466.20 CTQ28713.1 - 9.9e-20 70.8 3.5 1.8e-19 69.9 3.5 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28713.1 - 1.2e-14 54.0 0.0 3.4e-14 52.5 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Acetyltransf_1 PF00583.25 CTQ28714.1 - 1e-18 67.6 0.0 1.3e-18 67.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ28714.1 - 3e-10 40.1 0.0 3.8e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ28714.1 - 2.8e-09 37.3 0.0 4.4e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 CTQ28714.1 - 0.00019 22.1 0.0 0.00023 21.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ28714.1 - 0.00034 20.8 0.0 0.00043 20.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ28714.1 - 0.00072 19.5 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 CTQ28714.1 - 0.0054 16.8 0.0 0.0091 16.1 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_6 PF13480.7 CTQ28714.1 - 0.023 14.9 0.0 0.036 14.2 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 CTQ28714.1 - 0.037 13.5 0.0 0.039 13.4 0.0 1.1 1 0 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_9 PF13527.7 CTQ28714.1 - 0.048 13.7 0.0 0.075 13.1 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 CTQ28714.1 - 0.12 12.1 0.0 0.65 9.7 0.0 1.9 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain PEPCK_ATP PF01293.20 CTQ28715.1 - 2.5e-200 666.0 0.0 2.9e-200 665.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_33 PF13671.6 CTQ28715.1 - 0.025 14.7 0.0 0.14 12.4 0.0 2.2 3 0 0 3 3 3 0 AAA domain AAA_16 PF13191.6 CTQ28715.1 - 0.087 13.2 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain LysR_substrate PF03466.20 CTQ28716.1 - 1.1e-17 64.1 0.0 1.5e-17 63.6 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28716.1 - 5.1e-14 52.0 0.7 1.2e-13 50.8 0.0 2.0 3 0 0 3 3 3 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ28716.1 - 0.08 12.8 0.0 0.43 10.4 0.0 2.0 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Ribosom_S30AE_C PF16321.5 CTQ28716.1 - 0.15 11.8 0.1 0.28 10.9 0.1 1.4 1 0 0 1 1 1 0 Sigma 54 modulation/S30EA ribosomal protein C terminus ABC_tran PF00005.27 CTQ28717.1 - 4.8e-31 108.1 0.0 7.1e-31 107.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28717.1 - 3.7e-12 46.7 2.9 5.1e-07 29.8 0.3 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28717.1 - 6e-05 22.6 0.1 0.19 11.1 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ28717.1 - 0.00027 20.6 0.1 0.00077 19.2 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 CTQ28717.1 - 0.00028 21.3 0.1 0.0005 20.5 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain BCA_ABC_TP_C PF12399.8 CTQ28717.1 - 0.0011 18.9 0.0 0.0018 18.1 0.0 1.4 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter RsgA_GTPase PF03193.16 CTQ28717.1 - 0.0047 16.9 0.0 0.0092 15.9 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 CTQ28717.1 - 0.013 15.1 0.0 0.03 13.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 CTQ28717.1 - 0.02 14.6 0.1 0.044 13.5 0.0 1.5 2 0 0 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 CTQ28717.1 - 0.035 13.8 0.3 1.2 8.8 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 CTQ28717.1 - 0.042 14.0 0.2 0.2 11.8 0.1 2.1 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 CTQ28717.1 - 0.049 13.4 0.1 0.61 9.8 0.0 2.3 2 1 0 2 2 2 0 IstB-like ATP binding protein AAA_10 PF12846.7 CTQ28717.1 - 0.06 12.3 0.0 0.088 11.7 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain MMR_HSR1 PF01926.23 CTQ28717.1 - 0.07 13.2 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 CTQ28717.1 - 0.072 13.6 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ28717.1 - 0.11 12.4 0.1 0.28 11.1 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 CTQ28717.1 - 0.14 12.5 0.3 0.82 9.9 0.3 2.1 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 CTQ28718.1 - 1.1e-27 97.2 0.0 3.8e-27 95.5 0.0 1.8 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28718.1 - 4.2e-10 39.9 0.3 6.7e-05 22.8 0.2 2.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 CTQ28718.1 - 4.5e-07 29.7 0.7 7.7e-07 28.9 0.7 1.4 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_23 PF13476.6 CTQ28718.1 - 4.4e-06 27.3 0.3 7e-06 26.7 0.3 1.2 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ28718.1 - 2.5e-05 23.8 0.1 0.012 15.0 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 CTQ28718.1 - 0.00027 20.7 0.1 0.0023 17.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CTQ28718.1 - 0.00098 19.4 0.3 0.022 15.0 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CTQ28718.1 - 0.0018 17.9 0.1 0.0038 16.9 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ28718.1 - 0.0021 17.9 0.0 0.0059 16.4 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 CTQ28718.1 - 0.0024 18.3 0.8 0.022 15.1 0.8 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 CTQ28718.1 - 0.0075 15.9 0.7 0.49 9.9 0.2 2.5 2 1 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 CTQ28718.1 - 0.011 14.6 0.6 0.27 10.0 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 CTQ28718.1 - 0.013 15.4 0.0 0.027 14.4 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_27 PF13514.6 CTQ28718.1 - 0.021 14.4 0.2 0.18 11.4 0.0 2.4 2 1 1 3 3 3 0 AAA domain SRP54 PF00448.22 CTQ28718.1 - 0.022 14.4 0.1 0.047 13.3 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain FeoB_N PF02421.18 CTQ28718.1 - 0.036 13.6 0.2 0.096 12.2 0.2 1.7 1 0 0 1 1 1 0 Ferrous iron transport protein B MMR_HSR1 PF01926.23 CTQ28718.1 - 0.07 13.2 0.1 0.12 12.4 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase BPD_transp_2 PF02653.16 CTQ28719.1 - 2.4e-48 164.7 33.5 2.4e-48 164.7 33.5 2.1 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF3382 PF11862.8 CTQ28719.1 - 1.5e-19 70.0 2.5 1.5e-19 70.0 2.5 4.5 5 0 0 5 5 5 1 Domain of unknown function (DUF3382) YqjK PF13997.6 CTQ28719.1 - 2.2 8.6 6.1 0.57 10.5 0.4 2.7 2 0 0 2 2 2 0 YqjK-like protein DUF443 PF04276.12 CTQ28719.1 - 2.4 7.9 7.0 1.5 8.6 1.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF443) BPD_transp_2 PF02653.16 CTQ28720.1 - 6.1e-53 179.7 40.5 7.6e-53 179.4 40.5 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Phageshock_PspD PF09584.10 CTQ28720.1 - 0.026 14.6 0.1 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 Phage shock protein PspD (Phageshock_PspD) B12D PF06522.11 CTQ28720.1 - 5.4 6.9 5.1 8.7 6.2 0.9 3.3 3 0 0 3 3 3 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Peripla_BP_6 PF13458.6 CTQ28721.1 - 1.1e-62 212.7 8.5 1.2e-62 212.6 8.5 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 CTQ28721.1 - 1.3e-22 80.4 0.0 2.2e-22 79.7 0.0 1.3 1 1 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 CTQ28721.1 - 5.9e-20 71.6 0.0 8.3e-20 71.1 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain PhnG PF06754.12 CTQ28721.1 - 0.0033 17.4 0.0 0.045 13.7 0.0 2.3 2 0 0 2 2 2 1 Phosphonate metabolism protein PhnG Toprim_2 PF13155.6 CTQ28721.1 - 0.043 14.2 0.1 0.093 13.2 0.1 1.6 1 0 0 1 1 1 0 Toprim-like PGM_PMM_I PF02878.16 CTQ28721.1 - 0.1 12.3 0.4 0.38 10.5 0.1 2.1 3 0 0 3 3 3 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PFL-like PF02901.15 CTQ28722.1 - 6.2e-195 649.6 0.0 8.3e-195 649.2 0.0 1.1 1 0 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 CTQ28722.1 - 7.4e-41 139.0 0.0 1.3e-40 138.1 0.0 1.5 1 0 0 1 1 1 1 Glycine radical Acetate_kinase PF00871.17 CTQ28723.1 - 1.8e-150 501.0 0.0 2e-150 500.8 0.0 1.0 1 0 0 1 1 1 1 Acetokinase family Trp_Tyr_perm PF03222.13 CTQ28724.1 - 9.9e-09 34.7 27.4 1.4e-08 34.2 27.4 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family SPC25 PF06703.11 CTQ28724.1 - 0.14 12.0 1.1 3.7 7.3 0.1 2.7 2 0 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) PALP PF00291.25 CTQ28725.1 - 1.7e-76 257.4 0.3 2.2e-76 257.1 0.3 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HTH_9 PF08221.11 CTQ28725.1 - 0.057 13.5 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain LysR_substrate PF03466.20 CTQ28726.1 - 2.1e-30 105.7 0.0 3e-30 105.2 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28726.1 - 1.1e-17 63.7 0.0 2.2e-17 62.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family NMT1 PF09084.11 CTQ28726.1 - 0.14 12.1 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 NMT1/THI5 like Phosphonate-bd PF12974.7 CTQ28728.1 - 4.7e-15 55.8 0.0 8.2e-15 55.1 0.0 1.3 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein DUF1039 PF06287.11 CTQ28728.1 - 0.0047 17.3 0.1 0.012 16.0 0.1 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1039) SBP_bac_3 PF00497.20 CTQ28728.1 - 0.11 11.9 0.0 0.17 11.3 0.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 FA_desaturase PF00487.24 CTQ28729.1 - 1.9e-29 103.3 35.6 1.9e-29 103.3 35.6 2.0 1 1 1 2 2 2 1 Fatty acid desaturase T5orf172 PF10544.9 CTQ28730.1 - 2.6e-11 44.0 0.0 7.9e-11 42.4 0.0 1.8 1 1 0 1 1 1 1 T5orf172 domain MUG113 PF13455.6 CTQ28730.1 - 5.1e-08 33.5 0.1 1.4e-07 32.1 0.0 1.8 1 1 1 2 2 2 1 Meiotically up-regulated gene 113 Proteasome PF00227.26 CTQ28731.1 - 2.6e-06 27.1 0.0 7.5e-06 25.6 0.0 1.8 1 1 0 1 1 1 1 Proteasome subunit Phage_base_V PF04717.12 CTQ28731.1 - 0.071 13.0 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector Transglut_core PF01841.19 CTQ28732.1 - 8.5e-24 84.2 0.4 1.5e-23 83.4 0.4 1.4 1 0 0 1 1 1 1 Transglutaminase-like superfamily Bact_transglu_N PF08379.10 CTQ28732.1 - 1.4e-21 77.2 0.1 9e-21 74.6 0.0 2.2 2 0 0 2 2 2 1 Bacterial transglutaminase-like N-terminal region Alpha-E PF04168.12 CTQ28733.1 - 8.3e-79 265.4 9.2 9.3e-79 265.2 9.2 1.0 1 0 0 1 1 1 1 A predicted alpha-helical domain with a conserved ER motif. CP_ATPgrasp_2 PF14403.6 CTQ28734.1 - 1.8e-162 540.5 0.0 2.1e-162 540.3 0.0 1.0 1 0 0 1 1 1 1 Circularly permuted ATP-grasp type 2 CP_ATPgrasp_1 PF04174.13 CTQ28734.1 - 1.4e-155 517.3 0.2 1.8e-155 517.0 0.2 1.1 1 0 0 1 1 1 1 A circularly permuted ATPgrasp Trehalase PF01204.18 CTQ28736.1 - 6.2e-169 563.1 2.9 7.8e-169 562.8 2.9 1.1 1 0 0 1 1 1 1 Trehalase GDE_C PF06202.14 CTQ28736.1 - 8.6e-08 31.5 0.0 1.6e-07 30.6 0.0 1.4 1 1 0 1 1 1 1 Amylo-alpha-1,6-glucosidase Bac_rhamnosid6H PF17389.2 CTQ28736.1 - 0.0002 20.8 0.3 0.00031 20.1 0.3 1.3 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glyco_hydro_63 PF03200.16 CTQ28736.1 - 0.00057 18.8 1.6 0.014 14.1 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolase family 63 C-terminal domain Herpes_UL25 PF01499.16 CTQ28736.1 - 0.052 12.1 0.0 0.075 11.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL25 family TonB_dep_Rec PF00593.24 CTQ28737.1 - 1.1e-48 167.3 30.0 1.1e-48 167.3 30.0 1.9 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 CTQ28737.1 - 2.7e-24 85.8 0.6 6.8e-24 84.5 0.6 1.7 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain DUF560 PF04575.13 CTQ28737.1 - 0.0021 17.5 3.5 0.72 9.2 0.0 3.0 3 1 0 3 3 3 2 Protein of unknown function (DUF560) SLT PF01464.20 CTQ28738.1 - 3.2e-28 97.7 0.0 4.1e-28 97.4 0.0 1.1 1 0 0 1 1 1 1 Transglycosylase SLT domain Transglycosylas PF06737.14 CTQ28738.1 - 0.036 14.7 0.0 0.073 13.7 0.0 1.5 1 0 0 1 1 1 0 Transglycosylase-like domain SLT_2 PF13406.6 CTQ28738.1 - 0.13 11.5 0.3 0.54 9.4 0.1 1.9 1 1 1 2 2 2 0 Transglycosylase SLT domain Pollen_allerg_1 PF01357.21 CTQ28738.1 - 0.15 12.1 0.5 1.8 8.6 0.2 2.6 2 1 1 3 3 3 0 Pollen allergen Peptidase_S66C PF17676.1 CTQ28739.1 - 8.8e-30 103.8 0.0 1.3e-29 103.2 0.0 1.3 1 0 0 1 1 1 1 LD-carboxypeptidase C-terminal domain Peptidase_S66 PF02016.15 CTQ28739.1 - 5.9e-23 81.3 0.0 9.4e-23 80.6 0.0 1.3 1 0 0 1 1 1 1 LD-carboxypeptidase N-terminal domain Na_H_Exchanger PF00999.21 CTQ28740.1 - 6e-59 199.8 46.0 7.2e-59 199.5 46.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_C PF02080.21 CTQ28740.1 - 5.7e-11 42.1 0.0 1.1e-10 41.2 0.0 1.5 1 0 0 1 1 1 1 TrkA-C domain CorC_HlyC PF03471.17 CTQ28740.1 - 4.2e-10 39.5 0.1 7.4e-10 38.7 0.1 1.4 1 0 0 1 1 1 1 Transporter associated domain Ala_racemase_N PF01168.20 CTQ28741.1 - 7.2e-68 228.5 0.1 1e-67 228.0 0.1 1.2 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Ala_racemase_C PF00842.21 CTQ28741.1 - 5.6e-41 139.2 0.2 8.8e-41 138.6 0.2 1.3 1 0 0 1 1 1 1 Alanine racemase, C-terminal domain DAO PF01266.24 CTQ28742.1 - 7e-73 246.2 1.2 8.4e-73 246.0 1.2 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 CTQ28742.1 - 4.6e-08 33.5 0.0 4.3e-05 24.0 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ28742.1 - 1.4e-07 31.7 0.1 4.8e-06 26.7 0.1 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 CTQ28742.1 - 2.8e-07 30.0 0.1 0.00032 20.0 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 CTQ28742.1 - 8e-07 28.5 1.2 0.0086 15.2 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain ApbA PF02558.16 CTQ28742.1 - 1.4e-06 28.1 0.0 2e-05 24.3 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA HI0933_like PF03486.14 CTQ28742.1 - 4e-06 25.8 0.1 0.041 12.6 0.0 2.3 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_3 PF01494.19 CTQ28742.1 - 2.2e-05 23.9 0.5 0.0018 17.6 0.2 2.2 2 0 0 2 2 2 1 FAD binding domain AlaDh_PNT_C PF01262.21 CTQ28742.1 - 0.00012 21.4 0.0 0.0002 20.7 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Amino_oxidase PF01593.24 CTQ28742.1 - 0.0003 20.2 0.0 0.27 10.5 0.0 2.2 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase UDPG_MGDP_dh_N PF03721.14 CTQ28742.1 - 0.00046 19.8 0.0 0.00079 19.0 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_oxidored PF12831.7 CTQ28742.1 - 0.0005 19.5 1.0 0.35 10.1 0.8 2.7 1 1 1 2 2 2 2 FAD dependent oxidoreductase Trp_halogenase PF04820.14 CTQ28742.1 - 0.00088 18.2 0.1 0.8 8.5 0.0 2.2 2 0 0 2 2 2 2 Tryptophan halogenase 3HCDH_N PF02737.18 CTQ28742.1 - 0.0025 17.7 0.1 0.005 16.7 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 CTQ28742.1 - 0.007 16.6 0.0 0.014 15.7 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain GIDA PF01134.22 CTQ28742.1 - 0.041 12.9 0.4 0.33 10.0 0.2 2.0 2 0 0 2 2 2 0 Glucose inhibited division protein A F420_oxidored PF03807.17 CTQ28742.1 - 0.043 14.4 0.0 0.1 13.2 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent XdhC_C PF13478.6 CTQ28742.1 - 0.057 13.9 0.0 0.14 12.7 0.0 1.7 1 0 0 1 1 1 0 XdhC Rossmann domain Sacchrp_dh_NADP PF03435.18 CTQ28742.1 - 0.084 13.1 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Thi4 PF01946.17 CTQ28742.1 - 0.087 12.0 0.1 1.4 8.1 0.0 2.1 2 0 0 2 2 2 0 Thi4 family GDI PF00996.18 CTQ28742.1 - 0.1 11.1 0.0 2.4 6.6 0.0 2.0 2 0 0 2 2 2 0 GDP dissociation inhibitor NAD_Gly3P_dh_N PF01210.23 CTQ28742.1 - 0.14 12.2 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 CTQ28742.1 - 0.16 12.1 0.0 0.3 11.2 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 CTQ28742.1 - 0.16 11.3 0.0 0.3 10.4 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 CTQ28742.1 - 0.2 12.1 0.0 0.32 11.5 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding SpoVR PF04293.13 CTQ28743.1 - 1.2e-176 587.6 10.5 1.3e-176 587.4 10.5 1.0 1 0 0 1 1 1 1 SpoVR like protein P21-Arc PF04062.14 CTQ28743.1 - 0.043 13.9 0.1 0.094 12.8 0.1 1.5 1 0 0 1 1 1 0 ARP2/3 complex ARPC3 (21 kDa) subunit FadR_C PF07840.12 CTQ28744.1 - 7.2e-72 240.6 0.0 9e-72 240.3 0.0 1.1 1 0 0 1 1 1 1 FadR C-terminal domain GntR PF00392.21 CTQ28744.1 - 2.7e-20 71.8 0.0 5.7e-20 70.7 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 CTQ28744.1 - 1.4e-06 28.8 0.0 2.9e-06 27.7 0.0 1.5 2 0 0 2 2 2 1 FCD domain HTH_Crp_2 PF13545.6 CTQ28744.1 - 0.0001 22.2 0.0 0.00018 21.4 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 CTQ28744.1 - 0.00014 21.7 0.0 0.00027 20.7 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 CTQ28744.1 - 0.002 17.9 1.9 0.059 13.2 0.2 2.8 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_24 PF13412.6 CTQ28744.1 - 0.0042 16.6 0.9 0.0098 15.4 0.1 2.0 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 CTQ28744.1 - 0.0059 16.8 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_28 PF13518.6 CTQ28744.1 - 0.0077 16.3 0.2 0.2 11.8 0.1 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain PaaX PF07848.12 CTQ28744.1 - 0.028 14.6 0.0 0.08 13.2 0.0 1.7 1 0 0 1 1 1 0 PaaX-like protein Rrf2 PF02082.20 CTQ28744.1 - 0.032 14.6 0.0 0.074 13.4 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator MarR PF01047.22 CTQ28744.1 - 0.073 13.0 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 MarR family Cut8 PF08559.10 CTQ28744.1 - 0.19 11.3 0.0 0.29 10.7 0.0 1.3 1 0 0 1 1 1 0 Cut8, nuclear proteasome tether protein NhaB PF06450.12 CTQ28745.1 - 3.2e-290 963.3 23.0 3.7e-290 963.1 23.0 1.0 1 0 0 1 1 1 1 Bacterial Na+/H+ antiporter B (NhaB) CitMHS PF03600.16 CTQ28745.1 - 3.9e-06 26.3 48.0 0.00017 20.9 1.3 3.5 2 2 1 3 3 3 3 Citrate transporter ETRAMP PF09716.10 CTQ28745.1 - 0.51 10.4 1.6 52 4.0 0.9 3.8 2 1 1 3 3 3 0 Malarial early transcribed membrane protein (ETRAMP) DsbB PF02600.16 CTQ28746.1 - 1.4e-45 155.3 15.9 1.7e-45 155.0 15.9 1.0 1 0 0 1 1 1 1 Disulfide bond formation protein DsbB DUF1971 PF09313.11 CTQ28747.1 - 1.5e-27 95.4 0.0 1.9e-27 95.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1971) Cupin_2 PF07883.11 CTQ28747.1 - 0.0035 17.0 0.1 0.0056 16.4 0.1 1.4 1 1 0 1 1 1 1 Cupin domain CxxCxxCC PF03692.15 CTQ28748.1 - 2e-08 34.8 10.4 3.5e-08 34.0 10.4 1.4 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain FAA_hydrolase PF01557.18 CTQ28749.1 - 1.2e-52 178.7 0.0 1.3e-52 178.6 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family TYA PF01021.19 CTQ28749.1 - 0.17 12.3 0.0 0.35 11.2 0.0 1.5 2 0 0 2 2 2 0 TYA transposon protein YcgL PF05166.13 CTQ28750.1 - 3.9e-33 113.6 0.2 5.4e-33 113.2 0.2 1.2 1 0 0 1 1 1 1 YcgL domain UPF0180 PF03698.13 CTQ28750.1 - 0.054 13.7 0.1 0.09 13.0 0.1 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0180) MinC_N PF05209.13 CTQ28751.1 - 3.4e-33 113.7 0.0 4.5e-33 113.3 0.0 1.2 1 0 0 1 1 1 1 Septum formation inhibitor MinC, N-terminal domain MinC_C PF03775.16 CTQ28751.1 - 4.6e-31 106.8 0.0 8.1e-31 106.0 0.0 1.4 1 0 0 1 1 1 1 Septum formation inhibitor MinC, C-terminal domain DUF1204 PF06721.11 CTQ28751.1 - 0.22 11.0 0.0 0.27 10.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1204) AAA_31 PF13614.6 CTQ28752.1 - 9.8e-22 77.7 0.3 1.9e-21 76.8 0.3 1.4 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 CTQ28752.1 - 4.8e-20 71.9 0.1 6.4e-20 71.5 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 CTQ28752.1 - 6.6e-17 61.8 1.1 1.2e-15 57.7 1.1 2.5 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 CTQ28752.1 - 1.4e-10 40.8 2.7 1.5e-09 37.5 1.9 2.2 2 0 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 CTQ28752.1 - 1.4e-09 37.7 0.6 2.9e-09 36.6 0.6 1.5 1 1 0 1 1 1 1 ATPase MipZ CBP_BcsQ PF06564.12 CTQ28752.1 - 4.1e-07 29.7 0.0 7.3e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 CTQ28752.1 - 2.5e-05 23.9 0.2 0.0007 19.1 0.1 2.5 2 1 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_24 PF13479.6 CTQ28752.1 - 0.00027 20.7 0.1 0.0004 20.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain CLP1_P PF16575.5 CTQ28752.1 - 0.0018 18.1 0.1 0.0081 16.0 0.1 1.9 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop SRP54 PF00448.22 CTQ28752.1 - 0.0049 16.5 2.5 0.022 14.4 1.2 2.1 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_26 PF13500.6 CTQ28752.1 - 0.0076 16.1 4.3 2 8.2 1.4 3.0 2 1 1 3 3 3 1 AAA domain VirC1 PF07015.11 CTQ28752.1 - 0.0088 15.4 0.2 0.02 14.2 0.2 1.5 1 0 0 1 1 1 1 VirC1 protein DUF87 PF01935.17 CTQ28752.1 - 0.012 15.7 0.4 0.04 14.0 0.4 1.9 1 1 0 1 1 1 0 Helicase HerA, central domain CobA_CobO_BtuR PF02572.15 CTQ28752.1 - 0.023 15.0 0.9 0.077 13.2 0.9 1.8 1 1 0 1 1 1 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP adh_short PF00106.25 CTQ28752.1 - 0.027 13.9 0.3 8.4 5.8 0.2 2.5 3 0 0 3 3 3 0 short chain dehydrogenase AAA_25 PF13481.6 CTQ28752.1 - 0.089 12.4 2.2 0.73 9.4 2.4 2.2 2 1 0 2 2 2 0 AAA domain MeaB PF03308.16 CTQ28752.1 - 0.26 10.2 1.6 0.73 8.8 1.7 1.7 1 1 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_30 PF13604.6 CTQ28752.1 - 0.68 9.6 2.5 1.6 8.4 2.5 1.5 1 0 0 1 1 1 0 AAA domain MinE PF03776.14 CTQ28753.1 - 4.3e-25 87.5 0.2 5e-25 87.3 0.2 1.0 1 0 0 1 1 1 1 Septum formation topological specificity factor MinE DUF4364 PF14277.6 CTQ28753.1 - 0.049 13.4 0.1 0.051 13.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DNA_pol_A_exo1 PF01612.20 CTQ28754.1 - 1.2e-41 142.4 0.0 4.1e-41 140.6 0.0 1.8 2 0 0 2 2 2 1 3'-5' exonuclease HRDC PF00570.23 CTQ28754.1 - 1.6e-16 60.1 0.1 6.4e-15 54.9 0.0 2.7 3 0 0 3 3 3 1 HRDC domain AMP-binding PF00501.28 CTQ28755.1 - 1.4e-114 383.0 0.0 1.7e-114 382.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CTQ28755.1 - 4.4e-17 62.8 1.1 3.8e-16 59.8 0.3 2.6 2 1 0 2 2 2 1 AMP-binding enzyme C-terminal domain Pept_S41_N PF18294.1 CTQ28755.1 - 0.04 13.9 0.4 1.1 9.4 0.0 2.4 2 0 0 2 2 2 0 Peptidase S41 N-terminal domain AMP-binding_C_2 PF14535.6 CTQ28755.1 - 0.12 12.7 0.0 0.35 11.2 0.0 1.8 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain Slp PF03843.13 CTQ28756.1 - 2.7e-48 163.2 0.0 3.4e-48 162.9 0.0 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein Slp family Peptidase_M22 PF00814.25 CTQ28757.1 - 2.6e-29 102.8 0.0 3.4e-29 102.4 0.0 1.2 1 0 0 1 1 1 1 Glycoprotease family Helicase_C_2 PF13307.6 CTQ28758.1 - 3.5e-34 118.4 0.0 6e-34 117.7 0.0 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD PF00270.29 CTQ28758.1 - 7.7e-08 32.3 1.2 0.0003 20.6 0.1 3.5 4 0 0 4 4 4 2 DEAD/DEAH box helicase ResIII PF04851.15 CTQ28758.1 - 5.5e-07 29.8 0.0 1.4e-05 25.2 0.0 2.7 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.15 CTQ28758.1 - 4.6e-05 23.1 0.0 8.2e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 DEAD_2 DUF2075 PF09848.9 CTQ28758.1 - 0.008 15.5 0.4 0.15 11.3 0.1 2.2 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) POTRA_2 PF08479.11 CTQ28758.1 - 0.15 11.9 0.0 0.46 10.4 0.0 1.8 1 0 0 1 1 1 0 POTRA domain, ShlB-type Ribonuc_L-PSP PF01042.21 CTQ28759.1 - 1.6e-28 99.1 0.4 1.8e-28 99.0 0.4 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP UPF0181 PF03701.14 CTQ28760.1 - 2.5e-27 94.2 3.8 2.9e-27 94.0 3.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0181) Chorismate_bind PF00425.18 CTQ28761.1 - 8.5e-91 304.1 0.0 1.1e-90 303.7 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 CTQ28761.1 - 7.8e-24 84.5 0.0 3.2e-23 82.5 0.0 2.0 2 0 0 2 2 2 1 Anthranilate synthase component I, N terminal region NUDIX PF00293.28 CTQ28762.1 - 5.2e-15 55.7 0.0 7.8e-15 55.1 0.0 1.4 1 1 0 1 1 1 1 NUDIX domain SDH_alpha PF03313.15 CTQ28763.1 - 1.1e-94 316.9 6.0 1.5e-94 316.5 6.0 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain SDH_beta PF03315.15 CTQ28763.1 - 2.4e-56 190.4 0.0 5.1e-56 189.3 0.0 1.6 1 0 0 1 1 1 1 Serine dehydratase beta chain EAL PF00563.20 CTQ28764.1 - 3.4e-58 197.0 0.0 4.7e-58 196.5 0.0 1.2 1 0 0 1 1 1 1 EAL domain CSS-motif PF12792.7 CTQ28764.1 - 2.5e-27 95.7 0.1 4.8e-27 94.8 0.1 1.3 1 0 0 1 1 1 1 CSS motif domain associated with EAL TerC PF03741.16 CTQ28765.1 - 8.5e-49 165.7 14.5 1.2e-48 165.2 14.5 1.2 1 0 0 1 1 1 1 Integral membrane protein TerC family CorC_HlyC PF03471.17 CTQ28765.1 - 9.9e-18 63.9 0.1 2.4e-17 62.7 0.1 1.7 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 CTQ28765.1 - 8.2e-05 23.0 0.5 0.05 14.1 0.1 3.1 3 0 0 3 3 3 2 CBS domain DUF475 PF04332.15 CTQ28765.1 - 0.045 13.5 8.5 0.031 14.0 5.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF475) UPF0182 PF03699.13 CTQ28765.1 - 2.9 5.9 5.2 4.2 5.4 5.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) PTSIIB_sorb PF03830.15 CTQ28766.1 - 6.8e-55 185.4 1.1 1.1e-54 184.7 1.1 1.3 1 0 0 1 1 1 1 PTS system sorbose subfamily IIB component EIIA-man PF03610.16 CTQ28766.1 - 5.7e-36 123.3 0.0 1.3e-35 122.1 0.0 1.6 1 0 0 1 1 1 1 PTS system fructose IIA component Ribosomal_60s PF00428.19 CTQ28766.1 - 0.36 11.4 6.3 0.33 11.6 3.3 2.4 3 0 0 3 3 3 0 60s Acidic ribosomal protein EII-Sor PF03609.14 CTQ28767.1 - 2.8e-75 252.7 38.3 3.2e-75 252.5 38.3 1.0 1 0 0 1 1 1 1 PTS system sorbose-specific iic component Poxvirus_B22R_C PF13168.6 CTQ28767.1 - 3.4 7.1 7.4 11 5.5 2.0 2.4 2 0 0 2 2 2 0 Poxvirus B22R protein C-terminal EIID-AGA PF03613.14 CTQ28768.1 - 1.3e-112 375.3 1.3 1.4e-112 375.2 1.3 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component DUF986 PF06173.12 CTQ28769.1 - 3.7e-59 199.1 5.4 4.2e-59 198.9 5.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF986) Mntp PF02659.15 CTQ28770.1 - 2.5e-53 179.9 17.2 6e-53 178.7 10.8 2.0 2 0 0 2 2 2 2 Putative manganese efflux pump DUF373 PF04123.13 CTQ28770.1 - 0.27 10.6 4.2 0.37 10.2 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF3918 PF13056.6 CTQ28770.1 - 4.3 7.0 0.0 4.3 7.0 0.0 3.8 4 0 0 4 4 4 0 Protein of unknown function (DUF3918) Methyltransf_11 PF08241.12 CTQ28771.1 - 4e-15 56.2 0.0 1.3e-14 54.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ28771.1 - 3.4e-14 53.3 0.0 7.8e-14 52.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ28771.1 - 5.3e-12 45.8 0.0 8.6e-12 45.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ28771.1 - 2.1e-06 28.4 0.0 4.7e-06 27.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ28771.1 - 7.9e-06 25.8 0.0 1.9e-05 24.5 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 CTQ28771.1 - 9.9e-05 21.8 0.0 0.00018 20.9 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.6 CTQ28771.1 - 0.0037 17.2 0.0 0.0057 16.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 CTQ28771.1 - 0.0049 16.5 0.0 0.007 16.0 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_29 PF03141.16 CTQ28771.1 - 0.036 12.6 0.0 0.048 12.2 0.0 1.3 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase tRNA_U5-meth_tr PF05958.11 CTQ28771.1 - 0.04 12.9 0.0 0.058 12.4 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase AdoMet_MTase PF07757.13 CTQ28771.1 - 0.045 14.1 0.0 0.095 13.0 0.0 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase MTS PF05175.14 CTQ28771.1 - 0.052 13.1 0.0 0.083 12.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain MetW PF07021.12 CTQ28771.1 - 0.057 13.0 0.0 0.084 12.5 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW CMAS PF02353.20 CTQ28771.1 - 0.12 11.6 0.0 0.18 11.1 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Pox_MCEL PF03291.16 CTQ28771.1 - 0.13 11.3 0.0 0.28 10.2 0.0 1.5 1 1 0 1 1 1 0 mRNA capping enzyme DLH PF01738.18 CTQ28771.1 - 0.16 11.5 0.0 0.3 10.6 0.0 1.4 1 0 0 1 1 1 0 Dienelactone hydrolase family PrmA PF06325.13 CTQ28771.1 - 0.25 10.7 0.0 0.38 10.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Transpeptidase PF00905.22 CTQ28772.1 - 1.9e-74 250.7 0.0 2.3e-74 250.4 0.0 1.1 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 CTQ28772.1 - 3.1e-18 66.8 0.0 1.2e-16 61.6 0.0 2.4 1 1 0 1 1 1 1 Penicillin-binding Protein dimerisation domain CSD PF00313.22 CTQ28773.1 - 3e-33 113.5 1.6 3.2e-33 113.4 1.6 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 CTQ28773.1 - 0.0012 18.5 0.4 0.0015 18.1 0.4 1.4 1 1 0 1 1 1 1 Ribonuclease B OB domain YebO PF13974.6 CTQ28777.1 - 6.9e-34 115.8 1.2 8e-34 115.6 1.2 1.0 1 0 0 1 1 1 1 YebO-like protein DUF4381 PF14316.6 CTQ28777.1 - 0.0082 16.4 0.9 0.01 16.1 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4381) OSTbeta PF15048.6 CTQ28777.1 - 0.0089 16.2 0.1 0.012 15.8 0.1 1.1 1 0 0 1 1 1 1 Organic solute transporter subunit beta protein CHASE3 PF05227.13 CTQ28777.1 - 0.011 15.7 2.5 0.013 15.4 2.5 1.1 1 0 0 1 1 1 0 CHASE3 domain RTTN_N PF14726.6 CTQ28777.1 - 0.018 15.8 0.6 0.025 15.4 0.6 1.2 1 0 0 1 1 1 0 Rotatin, an armadillo repeat protein, centriole functioning VirArc_Nuclease PF12187.8 CTQ28778.1 - 0.024 14.2 0.0 0.024 14.2 0.0 1.1 1 0 0 1 1 1 0 Viral/Archaeal nuclease YobH PF13996.6 CTQ28779.1 - 5.8e-38 128.8 2.4 6.5e-38 128.6 2.4 1.0 1 0 0 1 1 1 1 YobH-like protein IclR PF01614.18 CTQ28780.1 - 7e-49 165.0 0.1 4.8e-47 159.0 0.0 2.5 3 0 0 3 3 3 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 CTQ28780.1 - 4.6e-14 51.9 0.4 1.9e-13 50.0 0.0 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.6 CTQ28780.1 - 1.7e-05 24.3 0.0 6.7e-05 22.4 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 CTQ28780.1 - 0.00019 21.2 0.1 0.00071 19.4 0.1 2.0 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 CTQ28780.1 - 0.00052 19.8 0.0 0.0013 18.6 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 CTQ28780.1 - 0.00074 19.4 0.1 0.0026 17.7 0.0 1.9 2 0 0 2 2 2 1 HTH domain Fe_dep_repress PF01325.19 CTQ28780.1 - 0.0028 17.8 0.2 0.01 16.0 0.2 2.0 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_26 PF13443.6 CTQ28780.1 - 0.0036 17.7 0.6 0.53 10.7 0.1 2.4 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain MarR_2 PF12802.7 CTQ28780.1 - 0.0042 17.0 0.1 0.011 15.6 0.0 1.7 2 0 0 2 2 2 1 MarR family Rrf2 PF02082.20 CTQ28780.1 - 0.0057 17.0 0.1 0.017 15.4 0.1 1.9 1 1 0 1 1 1 1 Transcriptional regulator Mga PF05043.13 CTQ28780.1 - 0.006 17.2 0.3 0.017 15.7 0.1 1.8 2 0 0 2 2 2 1 Mga helix-turn-helix domain MarR PF01047.22 CTQ28780.1 - 0.0061 16.5 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.6 CTQ28780.1 - 0.0085 16.1 0.1 0.023 14.7 0.0 1.8 2 0 0 2 2 1 1 Winged helix-turn-helix FUR PF01475.19 CTQ28780.1 - 0.012 15.7 0.0 0.021 15.0 0.0 1.5 1 0 0 1 1 1 0 Ferric uptake regulator family HTH_20 PF12840.7 CTQ28780.1 - 0.026 14.6 0.1 0.13 12.3 0.0 2.2 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_6 PF01418.17 CTQ28780.1 - 0.03 14.3 0.1 0.085 12.9 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family Dimerisation2 PF16864.5 CTQ28780.1 - 0.047 13.7 0.1 0.18 11.8 0.0 1.9 1 1 1 2 2 2 0 Dimerisation domain HTH_AsnC-type PF13404.6 CTQ28780.1 - 0.055 13.3 0.0 0.27 11.1 0.0 2.0 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain PadR PF03551.14 CTQ28780.1 - 0.062 13.3 0.1 0.15 12.1 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family MFS_1 PF07690.16 CTQ28781.1 - 5.8e-51 173.5 45.3 5.8e-51 173.5 45.3 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28781.1 - 8.9e-07 28.1 13.7 8.9e-07 28.1 13.7 3.2 2 2 1 3 3 3 1 Sugar (and other) transporter OATP PF03137.20 CTQ28781.1 - 0.025 12.9 13.6 0.078 11.3 2.4 2.4 2 0 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Peptidase_M48 PF01435.18 CTQ28782.1 - 1.5e-39 135.8 1.0 4.1e-39 134.4 1.0 1.7 1 1 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 CTQ28782.1 - 4.3e-05 22.9 0.0 7.7e-05 22.0 0.0 1.5 1 0 0 1 1 1 1 BlaR1 peptidase M56 Peptidase_M1 PF01433.20 CTQ28782.1 - 0.0048 16.5 0.0 0.0071 15.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain SprT-like PF10263.9 CTQ28782.1 - 0.049 13.5 0.0 0.08 12.8 0.0 1.3 1 0 0 1 1 1 0 SprT-like family DUF2614 PF11023.8 CTQ28782.1 - 6.3 6.9 6.5 0.5 10.5 1.4 1.8 2 0 0 2 2 2 0 Zinc-ribbon containing domain Phage_holin_3_6 PF07332.11 CTQ28782.1 - 8.2 6.5 9.7 1.1 9.3 2.4 2.4 2 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III TSP_NTD PF17804.1 CTQ28783.1 - 6.7e-58 196.1 5.7 6.7e-58 196.1 5.7 1.6 2 0 0 2 2 2 1 Tail specific protease N-terminal domain Peptidase_S41 PF03572.18 CTQ28783.1 - 5.3e-53 179.0 0.1 8.8e-53 178.3 0.1 1.4 1 0 0 1 1 1 1 Peptidase family S41 DUF3340 PF11818.8 CTQ28783.1 - 2.5e-42 144.7 4.1 6.3e-42 143.4 4.1 1.7 1 0 0 1 1 1 1 C-terminal domain of tail specific protease (DUF3340) PDZ PF00595.24 CTQ28783.1 - 6.5e-15 55.3 0.5 1.4e-14 54.2 0.5 1.6 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 CTQ28783.1 - 4.1e-06 26.5 1.2 1.5e-05 24.8 1.2 1.9 1 1 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 CTQ28783.1 - 0.00025 21.3 0.7 0.00069 19.9 0.7 1.8 1 0 0 1 1 1 1 PDZ domain ProQ PF04352.13 CTQ28784.1 - 3.5e-42 142.7 0.4 6.8e-42 141.8 0.1 1.6 1 1 1 2 2 2 1 ProQ/FINO family ProQ_C PF17516.2 CTQ28784.1 - 5.4e-24 83.4 1.8 9.1e-24 82.6 1.8 1.4 1 0 0 1 1 1 1 ProQ C-terminal domain S1 PF00575.23 CTQ28784.1 - 0.0071 16.7 0.1 0.03 14.6 0.1 2.1 2 1 1 3 3 3 1 S1 RNA binding domain PARP_reg PF02877.14 CTQ28784.1 - 0.015 15.4 0.0 0.03 14.4 0.0 1.4 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase, regulatory domain eIF2_C PF09173.11 CTQ28784.1 - 0.1 12.9 0.0 0.36 11.1 0.1 1.8 2 0 0 2 2 2 0 Initiation factor eIF2 gamma, C terminal DUF4407 PF14362.6 CTQ28784.1 - 5.3 6.3 8.6 7.1 5.9 8.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) GAF_2 PF13185.6 CTQ28785.1 - 4.1e-12 46.6 0.2 5.3e-12 46.2 0.2 1.2 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 CTQ28785.1 - 8.1e-08 33.0 0.1 1e-07 32.7 0.1 1.2 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 CTQ28785.1 - 0.0079 16.5 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 GAF domain PqiA PF04403.13 CTQ28786.1 - 5.1e-79 263.5 32.1 6.6e-43 146.2 11.9 2.0 2 0 0 2 2 2 2 Paraquat-inducible protein A XAF1_C PF18608.1 CTQ28786.1 - 0.028 14.0 0.6 0.094 12.3 0.6 1.8 1 0 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain Cytochrome_C7 PF14522.6 CTQ28786.1 - 0.075 13.0 2.2 0.1 12.6 0.4 2.0 2 0 0 2 2 2 0 Cytochrome c7 and related cytochrome c Tmemb_55A PF09788.9 CTQ28786.1 - 0.44 9.6 2.4 0.55 9.3 0.5 2.2 2 1 0 2 2 2 0 Transmembrane protein 55A zinc-ribbons_6 PF07191.12 CTQ28786.1 - 0.8 9.7 3.9 4.1 7.5 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbons Zn-ribbon_8 PF09723.10 CTQ28786.1 - 6.1 7.1 9.7 0.26 11.4 0.5 2.9 2 1 1 3 3 3 0 Zinc ribbon domain DUF983 PF06170.12 CTQ28786.1 - 7.7 7.0 0.0 7.7 7.0 0.0 5.3 7 1 0 7 7 7 0 Protein of unknown function (DUF983) MlaD PF02470.20 CTQ28787.1 - 1.5e-69 230.3 9.0 8.9e-16 58.0 0.1 7.4 7 0 0 7 7 7 7 MlaD protein Herpes_HEPA PF03324.14 CTQ28787.1 - 0.038 14.4 0.0 11 6.5 0.0 3.2 3 0 0 3 3 3 0 Herpesvirus DNA helicase/primase complex associated protein Methyltr_RsmB-F PF01189.17 CTQ28788.1 - 3.5e-47 160.6 0.0 4.9e-47 160.2 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 CTQ28788.1 - 3e-28 98.2 0.0 5.4e-28 97.3 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltranf_PUA PF13636.6 CTQ28788.1 - 3.9e-12 46.0 0.0 7.8e-12 45.0 0.0 1.6 1 0 0 1 1 1 1 RNA-binding PUA-like domain of methyltransferase RsmF Methyltransf_31 PF13847.6 CTQ28788.1 - 4.4e-05 23.3 0.0 6.9e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 CTQ28788.1 - 0.0009 19.4 0.0 0.0014 18.8 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_25 PF13649.6 CTQ28788.1 - 0.023 15.4 0.1 0.11 13.2 0.1 2.1 1 1 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 CTQ28788.1 - 0.031 14.0 0.0 0.067 12.9 0.0 1.5 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 CTQ28788.1 - 0.098 12.5 0.0 5.2 6.9 0.0 2.3 1 1 0 1 1 1 0 Methyltransferase domain Ubie_methyltran PF01209.18 CTQ28788.1 - 0.11 11.9 0.0 0.25 10.6 0.0 1.6 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family DUF1480 PF07351.13 CTQ28789.1 - 5.2e-43 145.2 0.1 5.7e-43 145.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1480) DUF1482 PF07358.11 CTQ28790.1 - 3.6e-33 113.2 0.4 4e-33 113.1 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1482) Metallophos PF00149.28 CTQ28791.1 - 4.4e-13 50.2 0.3 9e-13 49.2 0.3 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 CTQ28791.1 - 0.004 17.4 0.0 0.0054 16.9 0.0 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF535 PF04393.13 CTQ28792.1 - 9.3e-99 330.2 1.2 1.1e-98 330.0 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF535) DUF2511 PF10709.9 CTQ28793.1 - 1e-44 150.7 0.0 1.2e-44 150.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2511) CopD PF05425.13 CTQ28794.1 - 1.4e-19 70.4 10.2 1.4e-19 70.4 10.2 3.5 3 1 1 4 4 4 1 Copper resistance protein D CopC PF04234.12 CTQ28795.1 - 1.8e-25 89.8 0.7 2.2e-25 89.5 0.7 1.1 1 0 0 1 1 1 1 CopC domain MG2 PF01835.19 CTQ28795.1 - 0.002 18.5 0.0 0.0028 18.1 0.0 1.4 1 1 0 1 1 1 1 MG2 domain Big_5 PF13205.6 CTQ28795.1 - 0.0084 16.8 0.1 0.011 16.4 0.1 1.2 1 0 0 1 1 1 1 Bacterial Ig-like domain FlgD_ig PF13860.6 CTQ28795.1 - 0.039 13.8 0.1 0.095 12.6 0.1 1.7 1 1 0 1 1 1 0 FlgD Ig-like domain DNA_pol3_theta PF06440.11 CTQ28796.1 - 1.9e-37 126.7 0.1 2.1e-37 126.6 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase III, theta subunit MMM1 PF10296.9 CTQ28796.1 - 0.014 14.4 0.1 0.014 14.4 0.1 1.1 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 RNase_T PF00929.24 CTQ28797.1 - 6.4e-14 52.8 0.0 9.4e-13 49.0 0.0 2.1 1 1 0 1 1 1 1 Exonuclease Peptidase_S9_N PF02897.15 CTQ28798.1 - 1.7e-104 349.9 1.7 2.2e-104 349.5 1.7 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Peptidase_S9 PF00326.21 CTQ28798.1 - 6.4e-67 225.1 0.1 9.7e-67 224.5 0.1 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF533 PF04391.12 CTQ28799.1 - 6.8e-50 169.1 1.8 6.8e-50 169.1 1.8 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF533) TerB PF05099.13 CTQ28799.1 - 0.012 15.5 1.7 0.02 14.9 0.9 1.7 1 1 1 2 2 2 0 Tellurite resistance protein TerB YtxH PF12732.7 CTQ28799.1 - 2 9.0 6.5 18 5.9 5.8 2.6 2 1 0 2 2 2 0 YtxH-like protein YebG PF07130.12 CTQ28800.1 - 4.4e-32 109.7 3.2 5.6e-32 109.4 3.2 1.1 1 0 0 1 1 1 1 YebG protein Thyroglob_assoc PF16597.5 CTQ28800.1 - 0.1 12.9 0.7 0.19 12.1 0.7 1.4 1 0 0 1 1 1 0 Thyroglobulin_1 repeat associated disordered domain ATP-grasp PF02222.22 CTQ28801.1 - 1.6e-56 190.6 0.0 2.6e-56 189.9 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 CTQ28801.1 - 1.2e-06 28.2 0.0 9.5e-06 25.3 0.0 2.3 2 1 0 2 2 2 1 D-ala D-ala ligase C-terminus CPSase_L_D2 PF02786.17 CTQ28801.1 - 5.4e-06 26.1 0.0 1.2e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 CTQ28801.1 - 2.8e-05 24.2 0.0 6.1e-05 23.1 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain Epimerase PF01370.21 CTQ28801.1 - 0.00066 19.2 0.0 0.0012 18.4 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 2-Hacid_dh_C PF02826.19 CTQ28801.1 - 0.0021 17.5 0.0 0.0039 16.6 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LAL_C2 PF18603.1 CTQ28801.1 - 0.003 17.7 1.1 0.003 17.7 1.1 1.9 2 0 0 2 2 2 1 L-amino acid ligase C-terminal domain 2 GARS_A PF01071.19 CTQ28801.1 - 0.016 15.0 0.0 0.033 13.9 0.0 1.5 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 3HCDH_N PF02737.18 CTQ28801.1 - 0.11 12.4 0.0 0.24 11.3 0.0 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aldolase PF01081.19 CTQ28802.1 - 1.2e-88 295.7 0.9 1.4e-88 295.5 0.9 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase HMGL-like PF00682.19 CTQ28802.1 - 0.00096 18.8 0.3 0.0014 18.2 0.3 1.2 1 0 0 1 1 1 1 HMGL-like IMPDH PF00478.25 CTQ28802.1 - 0.094 11.7 0.7 0.14 11.2 0.7 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain ILVD_EDD PF00920.21 CTQ28803.1 - 4.2e-157 523.9 0.0 4.9e-157 523.7 0.0 1.0 1 0 0 1 1 1 1 Dehydratase family NDUF_B7 PF05676.13 CTQ28803.1 - 0.01 15.5 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) zf-A20 PF01754.16 CTQ28803.1 - 0.41 10.6 1.4 0.76 9.8 1.4 1.4 1 0 0 1 1 1 0 A20-like zinc finger G6PD_C PF02781.16 CTQ28804.1 - 2.1e-117 391.4 0.0 2.8e-117 391.1 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain G6PD_N PF00479.22 CTQ28804.1 - 1.4e-57 195.2 0.0 8.8e-57 192.6 0.0 2.0 2 0 0 2 2 2 1 Glucose-6-phosphate dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 CTQ28804.1 - 0.0028 18.5 0.0 0.0059 17.4 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold HTH_6 PF01418.17 CTQ28805.1 - 9.3e-32 108.8 0.3 4.9e-31 106.5 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 CTQ28805.1 - 3.2e-28 98.2 0.2 6.2e-28 97.3 0.2 1.5 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 CTQ28805.1 - 1.2e-10 41.6 2.0 7.4e-07 29.3 0.1 2.5 1 1 1 2 2 2 2 SIS domain HTH_IclR PF09339.10 CTQ28805.1 - 0.0021 17.8 1.3 0.008 16.0 0.1 2.6 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 CTQ28805.1 - 0.0073 15.7 0.0 0.017 14.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_24 PF13412.6 CTQ28805.1 - 0.018 14.6 0.0 0.053 13.1 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding SKA2 PF16740.5 CTQ28805.1 - 0.1 12.4 0.8 16 5.3 0.0 2.4 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 MarR_2 PF12802.7 CTQ28805.1 - 0.11 12.4 0.3 0.82 9.6 0.0 2.3 2 0 0 2 2 2 0 MarR family MarR PF01047.22 CTQ28805.1 - 0.14 12.1 0.0 0.51 10.3 0.0 1.9 2 0 0 2 2 2 0 MarR family PK PF00224.21 CTQ28806.1 - 3.5e-130 434.0 4.4 4.9e-130 433.4 4.4 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 CTQ28806.1 - 1.3e-29 102.8 0.2 3.4e-29 101.4 0.2 1.7 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Lip_A_acyltrans PF03279.13 CTQ28807.1 - 1.8e-100 336.0 0.0 2e-100 335.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase Peptidase_M23 PF01551.22 CTQ28808.1 - 7.8e-34 115.8 0.3 2.9e-33 113.9 0.2 2.0 2 0 0 2 2 2 1 Peptidase family M23 OapA PF04225.12 CTQ28808.1 - 6.1e-11 42.3 0.8 1.7e-07 31.3 0.0 2.9 1 1 0 2 2 2 2 Opacity-associated protein A LysM-like domain OapA_N PF08525.11 CTQ28808.1 - 4e-09 36.2 0.1 6.9e-09 35.4 0.1 1.4 1 0 0 1 1 1 1 Opacity-associated protein A N-terminal motif LysM PF01476.20 CTQ28808.1 - 8.4e-09 35.4 1.2 1.6e-08 34.5 0.2 2.0 2 0 0 2 2 2 1 LysM domain Biotin_lipoyl_2 PF13533.6 CTQ28808.1 - 0.11 12.3 0.0 0.39 10.6 0.0 2.0 1 0 0 1 1 1 0 Biotin-lipoyl like ZnuA PF01297.17 CTQ28809.1 - 2.8e-59 200.6 0.0 3.1e-59 200.5 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic ABC_tran PF00005.27 CTQ28810.1 - 1.2e-28 100.3 0.0 1.7e-28 99.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28810.1 - 2.3e-08 34.2 1.4 0.00057 19.8 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ28810.1 - 0.0014 18.5 0.1 0.0065 16.4 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 CTQ28810.1 - 0.0028 17.4 0.2 0.0066 16.2 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 CTQ28810.1 - 0.0051 16.4 2.2 0.045 13.3 2.2 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ28810.1 - 0.0068 15.9 0.1 1 8.7 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ28810.1 - 0.016 15.6 0.3 0.028 14.8 0.3 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 CTQ28810.1 - 0.026 14.8 0.6 0.12 12.6 0.6 2.0 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 CTQ28810.1 - 0.026 13.9 0.0 0.054 12.9 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MutS_V PF00488.21 CTQ28810.1 - 0.05 13.6 0.1 10 6.1 0.0 2.1 2 0 0 2 2 2 0 MutS domain V AAA_23 PF13476.6 CTQ28810.1 - 0.061 13.8 0.0 0.09 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ28810.1 - 0.098 12.4 0.0 0.27 10.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 CTQ28810.1 - 0.1 12.8 0.0 2.4 8.4 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ABC_ATPase PF09818.9 CTQ28810.1 - 0.11 11.2 0.4 1.1 8.0 0.0 2.2 2 1 0 2 2 2 0 Predicted ATPase of the ABC class Rad17 PF03215.15 CTQ28810.1 - 0.15 12.0 0.1 0.29 11.0 0.1 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_27 PF13514.6 CTQ28810.1 - 0.16 11.5 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_PrkA PF08298.11 CTQ28810.1 - 0.25 10.2 0.1 0.38 9.6 0.1 1.1 1 0 0 1 1 1 0 PrkA AAA domain ABC-3 PF00950.17 CTQ28811.1 - 3.8e-87 292.1 26.3 4.2e-87 291.9 26.3 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 CTQ28811.1 - 9.2e-06 24.9 28.2 9.5e-06 24.8 27.5 1.3 1 1 0 1 1 1 1 FecCD transport family DUF883 PF05957.13 CTQ28811.1 - 7.4 7.3 10.8 5.9 7.6 0.7 2.9 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF883) RuvB_N PF05496.12 CTQ28812.1 - 4.1e-82 273.6 0.0 5.7e-82 273.2 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_lid_4 PF17864.1 CTQ28812.1 - 5.2e-32 109.4 0.6 9.5e-32 108.6 0.6 1.5 1 0 0 1 1 1 1 RuvB AAA lid domain RuvB_C PF05491.13 CTQ28812.1 - 1.7e-25 88.7 0.0 2.9e-25 87.9 0.0 1.4 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain AAA PF00004.29 CTQ28812.1 - 5.5e-20 72.1 0.0 2e-19 70.4 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 CTQ28812.1 - 1.9e-08 34.4 0.0 0.0007 19.6 0.0 2.3 1 1 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 CTQ28812.1 - 7.2e-05 23.1 0.1 0.028 14.7 0.0 2.5 1 1 1 2 2 2 1 AAA domain Mg_chelatase PF01078.21 CTQ28812.1 - 0.00012 21.5 0.2 0.046 13.1 0.0 2.5 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 CTQ28812.1 - 0.00022 21.1 0.0 0.15 11.9 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 CTQ28812.1 - 0.00053 20.0 0.0 0.0008 19.4 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain Sigma54_activat PF00158.26 CTQ28812.1 - 0.0009 19.0 0.0 0.88 9.3 0.0 2.2 1 1 1 2 2 2 2 Sigma-54 interaction domain TIP49 PF06068.13 CTQ28812.1 - 0.0012 18.1 0.3 0.0089 15.3 0.0 2.1 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_16 PF13191.6 CTQ28812.1 - 0.0025 18.2 0.3 0.14 12.5 0.0 2.6 2 1 0 3 3 2 1 AAA ATPase domain AAA_14 PF13173.6 CTQ28812.1 - 0.0045 17.0 0.0 0.009 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CTQ28812.1 - 0.0056 17.2 0.0 0.02 15.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain DUF4129 PF13559.6 CTQ28812.1 - 0.017 15.4 0.6 0.087 13.1 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4129) NTPase_1 PF03266.15 CTQ28812.1 - 0.021 14.8 0.2 0.16 11.9 0.0 2.1 1 1 1 2 2 2 0 NTPase RNA_helicase PF00910.22 CTQ28812.1 - 0.032 14.6 0.0 0.057 13.8 0.0 1.4 1 0 0 1 1 1 0 RNA helicase DUF815 PF05673.13 CTQ28812.1 - 0.032 13.4 0.0 2 7.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF815) Bac_DnaA PF00308.18 CTQ28812.1 - 0.044 13.6 0.0 0.32 10.8 0.0 2.1 2 0 0 2 2 2 0 Bacterial dnaA protein TsaE PF02367.17 CTQ28812.1 - 0.045 13.8 0.0 0.082 12.9 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 CTQ28812.1 - 0.047 13.4 0.0 0.12 12.0 0.0 1.7 1 1 0 1 1 1 0 AAA domain MCM PF00493.23 CTQ28812.1 - 0.052 12.6 0.0 3.7 6.6 0.0 2.2 1 1 1 2 2 2 0 MCM P-loop domain AAA_17 PF13207.6 CTQ28812.1 - 0.07 13.6 0.0 0.15 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 CTQ28812.1 - 0.07 12.3 0.0 0.14 11.3 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain IstB_IS21 PF01695.17 CTQ28812.1 - 0.078 12.7 0.5 0.39 10.4 0.1 2.3 2 1 0 2 2 2 0 IstB-like ATP binding protein AAA_33 PF13671.6 CTQ28812.1 - 0.12 12.5 0.0 0.54 10.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 CTQ28812.1 - 0.14 12.5 0.5 2.4 8.5 0.1 2.3 1 1 1 2 2 2 0 AAA domain TniB PF05621.11 CTQ28812.1 - 0.14 11.6 0.0 2.8 7.3 0.0 2.2 1 1 1 2 2 2 0 Bacterial TniB protein HTH_15 PF12324.8 CTQ28812.1 - 0.14 12.1 0.0 0.34 10.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase AAA_28 PF13521.6 CTQ28812.1 - 0.15 12.3 0.3 0.36 11.1 0.0 1.7 2 0 0 2 2 1 0 AAA domain Sigma54_activ_2 PF14532.6 CTQ28812.1 - 0.19 11.9 0.0 0.34 11.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_tran PF00005.27 CTQ28812.1 - 0.19 12.3 0.0 0.33 11.5 0.0 1.4 1 0 0 1 1 1 0 ABC transporter RuvA_N PF01330.21 CTQ28813.1 - 1.1e-20 73.4 0.0 4.3e-20 71.6 0.0 1.9 2 0 0 2 2 2 1 RuvA N terminal domain HHH_5 PF14520.6 CTQ28813.1 - 1.2e-16 61.0 0.3 2.9e-16 59.8 0.3 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain RuvA_C PF07499.13 CTQ28813.1 - 8.4e-15 55.0 1.6 8.4e-15 55.0 1.6 1.9 2 0 0 2 2 2 1 RuvA, C-terminal domain HHH PF00633.23 CTQ28813.1 - 3.3e-08 33.0 0.2 0.00081 19.1 0.1 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif IMS_HHH PF11798.8 CTQ28813.1 - 0.0021 18.3 0.1 0.023 15.0 0.0 2.4 2 0 0 2 2 2 1 IMS family HHH motif HHH_3 PF12836.7 CTQ28813.1 - 0.0085 16.3 0.2 0.51 10.6 0.2 2.3 1 1 1 2 2 2 2 Helix-hairpin-helix motif Transposase_20 PF02371.16 CTQ28813.1 - 0.0089 16.3 0.0 0.36 11.2 0.0 2.4 2 0 0 2 2 2 1 Transposase IS116/IS110/IS902 family HHH_8 PF14716.6 CTQ28813.1 - 0.01 16.2 0.1 0.27 11.6 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix domain HHH_2 PF12826.7 CTQ28813.1 - 0.017 15.2 0.0 6.7 6.9 0.0 2.6 2 1 1 3 3 3 0 Helix-hairpin-helix motif LcrG PF07216.12 CTQ28813.1 - 0.083 12.8 0.1 0.23 11.4 0.0 1.7 2 0 0 2 2 2 0 LcrG protein 5_3_exonuc PF01367.20 CTQ28813.1 - 0.1 13.2 0.2 1.5 9.4 0.0 2.3 1 1 1 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold DUF3173 PF11372.8 CTQ28813.1 - 0.12 12.3 0.0 7.9 6.4 0.0 2.9 4 0 0 4 4 4 0 Domain of unknown function (DUF3173) FeS_assembly_P PF01883.19 CTQ28813.1 - 0.15 12.2 0.6 5.4 7.3 0.1 2.4 2 0 0 2 2 2 0 Iron-sulfur cluster assembly protein RuvC PF02075.17 CTQ28814.1 - 2.5e-68 228.6 0.6 3e-68 228.4 0.6 1.0 1 0 0 1 1 1 1 Crossover junction endodeoxyribonuclease RuvC DUF3882 PF07066.11 CTQ28814.1 - 0.00085 19.4 0.0 0.002 18.2 0.0 1.7 1 1 0 1 1 1 1 Lactococcus phage M3 protein NeuB PF03102.14 CTQ28814.1 - 0.015 14.8 0.1 0.019 14.4 0.1 1.1 1 0 0 1 1 1 0 NeuB family Transcrip_reg PF01709.20 CTQ28815.1 - 1.3e-94 316.2 0.1 1.4e-94 316.0 0.1 1.0 1 0 0 1 1 1 1 Transcriptional regulator NUDIX PF00293.28 CTQ28816.1 - 1.2e-20 73.9 1.1 1.3e-20 73.8 1.1 1.0 1 0 0 1 1 1 1 NUDIX domain tRNA-synt_2 PF00152.20 CTQ28817.1 - 1.1e-106 356.5 0.0 1.3e-106 356.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) GAD PF02938.14 CTQ28817.1 - 2.2e-31 107.9 0.1 4.3e-31 107.0 0.1 1.5 1 0 0 1 1 1 1 GAD domain tRNA_anti-codon PF01336.25 CTQ28817.1 - 2e-16 59.7 0.0 4.6e-16 58.6 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 CTQ28817.1 - 0.00066 19.2 0.1 0.53 9.7 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Isochorismatase PF00857.20 CTQ28818.1 - 1.6e-40 139.1 0.0 1.9e-40 138.9 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family DUF72 PF01904.18 CTQ28819.1 - 2.1e-50 171.8 0.5 2.9e-50 171.4 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 MAPEG PF01124.18 CTQ28820.1 - 3.1e-25 88.5 10.1 3.6e-25 88.4 10.1 1.0 1 0 0 1 1 1 1 MAPEG family Methyltransf_25 PF13649.6 CTQ28821.1 - 1.1e-13 51.7 0.0 2.6e-13 50.5 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ28821.1 - 3.8e-11 43.5 0.0 7.6e-11 42.5 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ28821.1 - 1.9e-10 40.7 0.0 2.9e-10 40.1 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 CTQ28821.1 - 1.2e-09 37.8 0.0 2.3e-09 36.9 0.0 1.4 1 1 0 1 1 1 1 O-methyltransferase domain Methyltransf_12 PF08242.12 CTQ28821.1 - 2.6e-09 37.7 0.0 4.3e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 CTQ28821.1 - 1.3e-05 24.6 0.0 2.7e-05 23.6 0.0 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 CTQ28821.1 - 1.7e-05 24.7 0.0 2.3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ28821.1 - 6.2e-05 22.6 0.0 9.1e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain CheR PF01739.18 CTQ28821.1 - 0.00047 19.7 0.0 0.59 9.6 0.0 2.2 1 1 0 2 2 2 2 CheR methyltransferase, SAM binding domain PCMT PF01135.19 CTQ28821.1 - 0.0015 18.4 0.0 0.002 17.9 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 CTQ28821.1 - 0.0034 17.5 0.0 0.012 15.7 0.0 1.6 1 1 0 2 2 2 1 FtsJ-like methyltransferase Rsm22 PF09243.10 CTQ28821.1 - 0.0068 15.7 0.0 0.013 14.8 0.0 1.4 2 0 0 2 2 2 1 Mitochondrial small ribosomal subunit Rsm22 Met_10 PF02475.16 CTQ28821.1 - 0.0079 16.0 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.7 CTQ28821.1 - 0.02 14.8 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 CTQ28821.1 - 0.048 13.3 0.0 0.085 12.5 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 PrmA PF06325.13 CTQ28821.1 - 0.13 11.6 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 CTQ28821.1 - 0.15 11.6 0.0 0.42 10.0 0.0 1.7 2 0 0 2 2 2 0 Putative methyltransferase Methyltransf_9 PF08003.11 CTQ28822.1 - 9.2e-170 563.6 0.0 1e-169 563.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_23 PF13489.6 CTQ28822.1 - 1.8e-11 44.1 0.0 3.1e-11 43.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ28822.1 - 2e-09 37.4 0.0 3.3e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ28822.1 - 1.8e-07 31.8 0.0 3.9e-07 30.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ28822.1 - 2e-07 31.6 0.0 4.6e-07 30.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ28822.1 - 7.1e-06 26.7 0.0 1.3e-05 25.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 CTQ28822.1 - 8.6e-05 22.0 0.0 0.00013 21.3 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PCMT PF01135.19 CTQ28822.1 - 0.012 15.4 0.1 0.066 13.0 0.1 1.9 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CutC PF03932.14 CTQ28823.1 - 6.8e-76 254.3 0.0 8e-76 254.0 0.0 1.0 1 0 0 1 1 1 1 CutC family YecM PF06185.12 CTQ28824.1 - 4e-70 235.1 0.0 4.6e-70 234.9 0.0 1.0 1 0 0 1 1 1 1 YecM protein tRNA-synt_1d PF00750.19 CTQ28825.1 - 1.8e-172 573.1 0.6 2.2e-172 572.8 0.6 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 CTQ28825.1 - 2.9e-34 117.8 0.0 1.9e-33 115.2 0.1 2.2 2 0 0 2 2 2 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 CTQ28825.1 - 1.2e-22 80.3 0.1 4.1e-22 78.6 0.1 2.0 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 CTQ28825.1 - 0.0025 17.2 0.1 0.0039 16.6 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 CTQ28825.1 - 0.035 12.8 0.1 0.064 12.0 0.1 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 CTQ28825.1 - 0.072 11.3 0.0 0.11 10.8 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) Glyco_hydro_88 PF07470.13 CTQ28826.1 - 1.4e-106 356.5 5.5 1.8e-106 356.1 5.5 1.2 1 0 0 1 1 1 1 Glycosyl Hydrolase Family 88 MFS_2 PF13347.6 CTQ28827.1 - 9.3e-53 179.3 35.6 1.1e-52 179.0 35.6 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 CTQ28827.1 - 5.6e-17 61.7 34.1 5.6e-17 61.7 34.1 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF3959 PF13105.6 CTQ28827.1 - 2.1 7.8 6.5 4.4 6.7 6.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Usp PF00582.26 CTQ28828.1 - 3.7e-13 50.2 0.0 4.1e-13 50.0 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family PSD4 PF07631.11 CTQ28828.1 - 0.11 13.1 0.1 0.16 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1592) Glyco_transf_20 PF00982.21 CTQ28829.1 - 4.4e-146 487.3 0.0 5.1e-146 487.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 Metal_resist PF13801.6 CTQ28829.1 - 0.18 12.0 3.0 1.4 9.1 1.3 2.3 2 0 0 2 2 2 0 Heavy-metal resistance Trehalose_PPase PF02358.16 CTQ28830.1 - 2e-55 187.5 0.0 2.4e-55 187.2 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase Hydrolase_3 PF08282.12 CTQ28830.1 - 4.7e-11 42.9 0.0 7.5e-06 25.9 0.0 2.1 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 CTQ28830.1 - 6.9e-05 22.5 0.0 0.00026 20.6 0.0 1.8 1 1 0 1 1 1 1 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 CTQ28830.1 - 0.0076 16.6 0.5 0.22 11.8 0.5 2.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase BPD_transp_2 PF02653.16 CTQ28831.1 - 1.2e-44 152.5 35.6 1.2e-44 152.5 35.6 1.8 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component PDR_CDR PF06422.12 CTQ28831.1 - 0.023 14.6 2.0 0.033 14.1 0.6 1.9 2 0 0 2 2 2 0 CDR ABC transporter ABC_tran PF00005.27 CTQ28832.1 - 2.6e-54 183.4 0.0 1e-32 113.5 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ28832.1 - 2.6e-13 50.5 1.5 0.00028 20.8 0.1 3.1 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28832.1 - 0.00092 18.7 0.1 0.021 14.3 0.1 2.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ28832.1 - 0.001 19.0 1.1 0.0091 15.9 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 CTQ28832.1 - 0.0072 16.0 0.5 0.023 14.4 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 CTQ28832.1 - 0.0093 16.0 0.5 1.3 9.2 0.1 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase TsaE PF02367.17 CTQ28832.1 - 0.04 13.9 0.3 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_22 PF13401.6 CTQ28832.1 - 0.044 14.1 0.3 1.6 9.0 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_15 PF13175.6 CTQ28832.1 - 0.046 13.4 0.1 0.39 10.4 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_23 PF13476.6 CTQ28832.1 - 0.052 14.1 0.0 0.087 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ28832.1 - 0.12 12.1 0.5 0.76 9.5 0.0 2.4 2 1 0 2 2 2 0 AAA domain Peripla_BP_1 PF00532.21 CTQ28833.1 - 3.9e-88 295.5 0.0 4.6e-88 295.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 CTQ28833.1 - 1.1e-19 71.0 0.6 1.4e-19 70.7 0.6 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_3 PF13377.6 CTQ28833.1 - 0.0015 18.9 0.0 0.0056 17.0 0.0 1.9 1 1 1 2 2 2 1 Periplasmic binding protein-like domain Ferritin PF00210.24 CTQ28834.1 - 1.8e-18 66.8 0.1 2.1e-18 66.6 0.1 1.1 1 0 0 1 1 1 1 Ferritin-like domain MFS_2 PF13347.6 CTQ28835.1 - 5e-55 186.8 34.3 5.6e-55 186.6 34.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 CTQ28835.1 - 2.6e-10 39.7 36.7 2.6e-10 39.7 36.7 2.3 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF4059 PF13268.6 CTQ28835.1 - 9 6.8 9.2 8.3 6.9 0.0 4.1 3 1 1 4 4 4 0 Protein of unknown function (DUF4059) DUF2766 PF10964.8 CTQ28836.1 - 1e-44 150.4 2.3 1.2e-44 150.2 2.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2766) MFS_1 PF07690.16 CTQ28837.1 - 2.9e-44 151.5 43.2 2.9e-44 151.5 43.2 2.3 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_3 PF05977.13 CTQ28837.1 - 1.5e-06 26.9 22.7 0.0012 17.3 7.2 2.2 2 0 0 2 2 2 2 Transmembrane secretion effector TRI12 PF06609.13 CTQ28837.1 - 2.2e-05 23.1 7.7 2.6e-05 22.9 6.7 1.5 1 1 1 2 2 2 1 Fungal trichothecene efflux pump (TRI12) LacAB_rpiB PF02502.18 CTQ28838.1 - 3.9e-30 104.7 0.0 4.9e-30 104.3 0.0 1.2 1 0 0 1 1 1 1 Ribose/Galactose Isomerase DUF3666 PF12408.8 CTQ28838.1 - 2e-22 78.1 0.1 3.4e-22 77.4 0.1 1.4 1 0 0 1 1 1 1 Ribose-5-phosphate isomerase NPM1-C PF16276.5 CTQ28839.1 - 0.03 14.3 0.2 0.046 13.7 0.2 1.3 1 0 0 1 1 1 0 Nucleophosmin C-terminal domain Ferritin PF00210.24 CTQ28840.1 - 2.3e-35 121.6 5.0 2.7e-35 121.4 5.0 1.0 1 0 0 1 1 1 1 Ferritin-like domain DUF2492 PF10678.9 CTQ28841.1 - 4.4e-35 119.8 0.1 4.9e-35 119.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2492) Trp_Tyr_perm PF03222.13 CTQ28842.1 - 3.1e-134 447.9 27.5 3.6e-134 447.7 27.5 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 CTQ28842.1 - 4.6e-09 35.5 17.1 4.6e-09 35.5 17.1 2.1 2 1 0 2 2 2 1 Transmembrane amino acid transporter protein UPF0149 PF03695.13 CTQ28843.1 - 7.9e-31 107.7 5.6 9.1e-31 107.5 5.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0149) SEC-C PF02810.15 CTQ28843.1 - 2.6e-11 43.2 9.6 4.2e-11 42.6 9.6 1.4 1 0 0 1 1 1 1 SEC-C motif DHDPS PF00701.22 CTQ28844.1 - 1.5e-35 122.3 0.0 1.7e-35 122.1 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family CDP-OH_P_transf PF01066.21 CTQ28845.1 - 3.7e-17 62.9 1.5 3.7e-17 62.9 1.5 2.7 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF202 PF02656.15 CTQ28845.1 - 1.1 9.7 13.7 67 4.0 12.7 2.7 1 1 0 1 1 1 0 Domain of unknown function (DUF202) UvrC_HhH_N PF08459.11 CTQ28846.1 - 1.8e-45 154.6 0.0 4.2e-45 153.4 0.0 1.6 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.24 CTQ28846.1 - 8.5e-11 42.0 0.1 1.7e-10 41.0 0.1 1.5 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.19 CTQ28846.1 - 3.5e-10 39.3 2.7 7.1e-10 38.3 2.7 1.5 1 0 0 1 1 1 1 UvrB/uvrC motif HHH PF00633.23 CTQ28846.1 - 3e-09 36.3 0.1 0.00022 20.9 0.0 2.8 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_5 PF14520.6 CTQ28846.1 - 2.4e-08 34.4 0.0 6.6e-08 33.1 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_3 PF12836.7 CTQ28846.1 - 8.3e-06 26.0 0.2 0.049 13.9 0.0 3.2 3 0 0 3 3 3 2 Helix-hairpin-helix motif HHH_2 PF12826.7 CTQ28846.1 - 5.7e-05 23.1 0.0 0.00012 22.1 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif Response_reg PF00072.24 CTQ28847.1 - 1.6e-29 102.3 0.0 2.9e-29 101.5 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 CTQ28847.1 - 6.2e-21 73.7 2.8 7e-21 73.5 0.2 2.3 3 0 0 3 3 3 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 CTQ28847.1 - 2.4e-06 27.1 0.3 4.8e-06 26.1 0.1 1.6 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.6 CTQ28847.1 - 0.00029 20.6 0.0 0.0022 17.7 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 CTQ28847.1 - 0.0024 17.8 0.2 0.0082 16.1 0.0 2.0 3 0 0 3 3 2 1 Winged helix-turn helix HTH_24 PF13412.6 CTQ28847.1 - 0.005 16.4 0.1 0.013 15.1 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_7 PF02796.15 CTQ28847.1 - 0.0089 16.1 0.1 0.024 14.7 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_Mga PF08280.11 CTQ28847.1 - 0.01 15.8 0.1 0.026 14.5 0.1 1.7 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_28 PF13518.6 CTQ28847.1 - 0.019 15.1 0.1 0.27 11.4 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 CTQ28847.1 - 0.028 13.9 0.1 0.12 11.9 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 DUF2089 PF09862.9 CTQ28847.1 - 0.031 14.3 0.0 0.048 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) Terminase_5 PF06056.12 CTQ28847.1 - 0.065 13.1 0.1 0.25 11.2 0.0 1.9 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) HTH_5 PF01022.20 CTQ28847.1 - 0.068 13.1 0.2 0.21 11.5 0.1 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_40 PF14493.6 CTQ28847.1 - 0.086 13.3 0.0 0.22 12.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 CTQ28847.1 - 0.13 12.3 0.2 0.32 11.0 0.0 1.8 2 0 0 2 2 1 0 HTH domain DUF2594 PF10769.9 CTQ28848.1 - 7.4e-40 134.9 3.4 8e-40 134.7 3.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2594) ATP-grasp PF02222.22 CTQ28848.1 - 0.013 15.1 0.1 0.014 15.0 0.1 1.1 1 0 0 1 1 1 0 ATP-grasp domain Anti-adapt_IraP PF10796.9 CTQ28848.1 - 0.044 14.4 3.1 0.05 14.2 3.1 1.1 1 0 0 1 1 1 0 Sigma-S stabilisation anti-adaptor protein DUF5327 PF17261.2 CTQ28848.1 - 0.12 13.1 6.6 0.47 11.2 1.8 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5327) Autoind_bind PF03472.15 CTQ28849.1 - 5.9e-30 103.7 0.0 9.1e-30 103.1 0.0 1.3 1 0 0 1 1 1 1 Autoinducer binding domain GerE PF00196.19 CTQ28849.1 - 4.6e-22 77.3 0.2 7.9e-22 76.6 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_20 PF12840.7 CTQ28849.1 - 0.003 17.6 0.4 0.097 12.7 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ28849.1 - 0.054 13.3 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain Sigma70_r4_2 PF08281.12 CTQ28849.1 - 0.074 12.7 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 ABC_tran PF00005.27 CTQ28850.1 - 6.3e-36 123.9 0.0 9.2e-36 123.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28850.1 - 2.6e-13 50.5 0.0 2.5e-06 27.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ28850.1 - 1.8e-09 37.4 0.1 2.5e-08 33.6 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ28850.1 - 4.1e-07 30.4 0.1 3.7e-06 27.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 CTQ28850.1 - 1.3e-05 24.2 0.9 0.17 10.6 0.0 2.9 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_16 PF13191.6 CTQ28850.1 - 3.8e-05 24.1 0.2 9.5e-05 22.8 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ28850.1 - 7.8e-05 22.3 0.0 0.00014 21.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ28850.1 - 0.0001 22.1 0.0 0.042 13.5 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_13 PF13166.6 CTQ28850.1 - 0.00011 21.0 0.0 0.034 12.8 0.0 2.0 1 1 0 2 2 2 2 AAA domain AAA_23 PF13476.6 CTQ28850.1 - 0.00026 21.5 0.0 0.00051 20.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CTQ28850.1 - 0.00036 20.7 0.0 0.00095 19.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 CTQ28850.1 - 0.00066 19.7 0.1 0.035 14.0 0.0 2.1 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_25 PF13481.6 CTQ28850.1 - 0.0012 18.4 0.2 0.12 12.0 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 CTQ28850.1 - 0.0013 18.5 0.2 0.0026 17.5 0.1 1.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ28850.1 - 0.0021 18.0 0.1 0.0038 17.1 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase NACHT PF05729.12 CTQ28850.1 - 0.0023 17.9 0.0 0.0052 16.7 0.0 1.6 1 0 0 1 1 1 1 NACHT domain PhoH PF02562.16 CTQ28850.1 - 0.0038 16.7 0.0 0.0068 15.9 0.0 1.4 1 0 0 1 1 1 1 PhoH-like protein NB-ARC PF00931.22 CTQ28850.1 - 0.0059 15.8 0.1 0.012 14.9 0.1 1.7 1 1 0 1 1 1 1 NB-ARC domain AAA_24 PF13479.6 CTQ28850.1 - 0.0071 16.1 0.0 0.017 14.8 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 CTQ28850.1 - 0.0079 16.6 0.1 1.2 9.6 0.0 2.4 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) cobW PF02492.19 CTQ28850.1 - 0.0091 15.6 0.1 0.023 14.3 0.0 1.7 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 CTQ28850.1 - 0.016 15.5 0.3 0.044 14.0 0.0 1.9 2 1 0 2 2 2 0 AAA domain TniB PF05621.11 CTQ28850.1 - 0.024 14.0 0.0 7.3 6.0 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein G-alpha PF00503.20 CTQ28850.1 - 0.034 13.3 0.0 0.042 13.0 0.0 1.4 1 1 0 1 1 1 0 G-protein alpha subunit T2SSE PF00437.20 CTQ28850.1 - 0.05 12.7 3.8 0.11 11.6 0.1 2.6 2 1 1 3 3 3 0 Type II/IV secretion system protein IstB_IS21 PF01695.17 CTQ28850.1 - 0.05 13.3 0.1 0.5 10.1 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_18 PF13238.6 CTQ28850.1 - 0.053 14.1 0.2 0.12 12.9 0.1 1.7 2 1 0 2 2 1 0 AAA domain AAA_19 PF13245.6 CTQ28850.1 - 0.056 13.8 0.1 0.18 12.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain RecA PF00154.21 CTQ28850.1 - 0.058 12.8 0.2 0.32 10.4 0.0 2.1 2 1 1 3 3 2 0 recA bacterial DNA recombination protein MobB PF03205.14 CTQ28850.1 - 0.06 13.2 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SbcCD_C PF13558.6 CTQ28850.1 - 0.066 13.4 0.1 0.96 9.7 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_14 PF13173.6 CTQ28850.1 - 0.068 13.2 0.0 0.51 10.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 CTQ28850.1 - 0.075 12.5 0.0 0.16 11.5 0.0 1.5 1 1 0 1 1 1 0 P-loop containing dynein motor region Rad17 PF03215.15 CTQ28850.1 - 0.077 12.9 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain Pox_A32 PF04665.12 CTQ28850.1 - 0.08 12.4 0.0 0.37 10.2 0.0 1.8 2 0 0 2 2 2 0 Poxvirus A32 protein NTPase_1 PF03266.15 CTQ28850.1 - 0.11 12.4 0.2 1.7 8.5 0.1 2.2 2 0 0 2 2 2 0 NTPase MMR_HSR1 PF01926.23 CTQ28850.1 - 0.12 12.5 0.0 0.23 11.5 0.0 1.7 2 0 0 2 2 1 0 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 CTQ28850.1 - 0.14 11.9 0.0 0.61 9.8 0.0 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein PduV-EutP PF10662.9 CTQ28850.1 - 0.15 11.8 0.0 0.33 10.7 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ATP-synt_ab PF00006.25 CTQ28850.1 - 0.17 11.5 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain TsaE PF02367.17 CTQ28850.1 - 0.17 11.9 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE BPD_transp_1 PF00528.22 CTQ28851.1 - 6.3e-26 91.2 11.3 8.4e-26 90.8 11.3 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component PALP PF00291.25 CTQ28852.1 - 2.4e-52 178.2 0.5 2.7e-52 178.0 0.5 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme SBP_bac_3 PF00497.20 CTQ28853.1 - 3.1e-71 239.4 0.7 3.7e-71 239.1 0.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ28853.1 - 3.1e-11 43.5 0.0 9.3e-11 41.9 0.0 1.8 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site Phosphonate-bd PF12974.7 CTQ28853.1 - 0.01 15.4 0.3 0.48 10.0 0.3 3.0 1 1 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.11 CTQ28853.1 - 0.019 14.9 0.4 0.12 12.2 0.2 2.0 1 1 1 2 2 2 0 NMT1/THI5 like Alpha-amylase PF00128.24 CTQ28854.1 - 1.4e-23 84.0 0.2 2.5e-23 83.2 0.2 1.3 1 0 0 1 1 1 1 Alpha amylase, catalytic domain Glyco_hydro_70 PF02324.16 CTQ28854.1 - 7.4e-11 41.0 0.1 0.00029 19.2 0.1 3.0 3 0 0 3 3 3 3 Glycosyl hydrolase family 70 Alpha-amylase_C PF02806.18 CTQ28854.1 - 6.8e-07 29.7 0.1 3.2e-06 27.5 0.0 2.2 2 0 0 2 2 2 1 Alpha amylase, C-terminal all-beta domain DUF1939 PF09154.10 CTQ28854.1 - 0.041 14.1 0.9 0.14 12.4 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1939) Malt_amylase_C PF16657.5 CTQ28854.1 - 0.065 13.4 0.0 0.19 11.8 0.0 1.8 1 0 0 1 1 1 0 Maltogenic Amylase, C-terminal domain YedD PF13987.6 CTQ28855.1 - 3.3e-53 178.0 0.0 4e-53 177.7 0.0 1.1 1 0 0 1 1 1 1 YedD-like protein LPAM_1 PF08139.12 CTQ28855.1 - 0.068 13.7 2.5 0.15 12.6 2.5 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site GerE PF00196.19 CTQ28856.1 - 9.8e-18 63.5 2.2 1.8e-17 62.6 2.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_40 PF14493.6 CTQ28856.1 - 0.069 13.6 0.5 0.23 11.9 0.5 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain DSRB PF10781.9 CTQ28857.1 - 5.4e-36 122.1 0.1 6e-36 121.9 0.1 1.0 1 0 0 1 1 1 1 Dextransucrase DSRB DUF2525 PF10733.9 CTQ28858.1 - 6.7e-31 106.4 0.7 8e-31 106.1 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2525) CHASE7 PF17151.4 CTQ28859.1 - 1.7e-78 262.5 0.3 2.6e-78 261.9 0.3 1.3 1 0 0 1 1 1 1 Periplasmic sensor domain GGDEF PF00990.21 CTQ28859.1 - 1.6e-46 158.0 0.1 2.6e-46 157.3 0.1 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 CTQ28859.1 - 0.0058 16.9 0.2 0.022 15.0 0.2 2.0 1 0 0 1 1 1 1 GGDEF-like domain DUF808 PF05661.12 CTQ28860.1 - 3.2e-114 381.1 11.5 3.8e-114 380.8 11.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF808) TerC PF03741.16 CTQ28860.1 - 0.0052 16.5 0.5 0.0052 16.5 0.5 2.3 1 1 1 2 2 2 1 Integral membrane protein TerC family AAA_11 PF13086.6 CTQ28860.1 - 0.26 11.1 0.0 0.31 10.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain SirB PF04247.12 CTQ28860.1 - 0.32 11.1 4.7 0.96 9.6 4.7 1.9 1 0 0 1 1 1 0 Invasion gene expression up-regulator, SirB EamA PF00892.20 CTQ28861.1 - 9.9e-38 129.4 48.4 3.5e-19 69.3 23.5 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 CTQ28861.1 - 0.0017 17.8 12.7 0.19 11.0 0.6 2.1 1 1 1 2 2 2 2 Triose-phosphate Transporter family Vsr PF03852.15 CTQ28862.1 - 2.3e-34 117.1 0.1 3.6e-34 116.4 0.1 1.3 1 0 0 1 1 1 1 DNA mismatch endonuclease Vsr DNA_methylase PF00145.17 CTQ28863.1 - 7.4e-75 252.4 0.0 9.6e-75 252.0 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase DNA_meth_N PF18284.1 CTQ28863.1 - 4.7e-21 74.4 1.6 2.8e-19 68.7 1.2 2.4 2 0 0 2 2 2 1 DNA methylase N-terminal domain Cons_hypoth95 PF03602.15 CTQ28863.1 - 0.12 12.0 0.0 0.26 10.9 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical protein 95 HD PF01966.22 CTQ28864.1 - 7.3e-13 48.8 0.1 1.4e-12 47.9 0.1 1.4 1 0 0 1 1 1 1 HD domain DUF4310 PF14187.6 CTQ28865.1 - 0.0073 16.0 0.2 0.0088 15.7 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4310) Porin_1 PF00267.21 CTQ28866.1 - 1.4e-149 498.1 27.1 1.6e-149 498.0 27.1 1.0 1 0 0 1 1 1 1 Gram-negative porin Porin_4 PF13609.6 CTQ28866.1 - 1.8e-21 77.2 31.8 2.4e-21 76.8 31.8 1.1 1 0 0 1 1 1 1 Gram-negative porin Peptidase_M90 PF06167.12 CTQ28867.1 - 8.9e-64 215.4 0.0 1.1e-63 215.2 0.0 1.0 1 0 0 1 1 1 1 Glucose-regulated metallo-peptidase M90 Ribonuc_L-PSP PF01042.21 CTQ28868.1 - 3e-25 88.6 0.0 3.4e-25 88.4 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP LysR_substrate PF03466.20 CTQ28869.1 - 2.3e-37 128.4 0.7 3.7e-37 127.7 0.7 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28869.1 - 7.7e-19 67.4 1.5 1.7e-18 66.3 1.5 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_IclR PF09339.10 CTQ28869.1 - 0.0073 16.1 0.4 0.018 14.9 0.4 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain Sec8_exocyst PF04048.14 CTQ28869.1 - 0.012 15.5 0.0 0.017 15.0 0.0 1.2 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain HTH_30 PF13556.6 CTQ28869.1 - 0.014 15.2 0.6 0.028 14.2 0.6 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 CTQ28869.1 - 0.027 13.9 0.2 0.79 9.2 0.2 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 MarR_2 PF12802.7 CTQ28869.1 - 0.04 13.8 0.1 0.13 12.2 0.1 1.8 1 0 0 1 1 1 0 MarR family HTH_31 PF13560.6 CTQ28869.1 - 0.048 14.0 0.1 0.13 12.6 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain ExbD PF02472.16 CTQ28869.1 - 0.15 12.3 0.0 0.24 11.6 0.0 1.3 1 0 0 1 1 1 0 Biopolymer transport protein ExbD/TolR Ldt_C PF17969.1 CTQ28870.1 - 1.3e-24 86.7 0.1 2.2e-24 85.9 0.1 1.4 1 0 0 1 1 1 1 L,D-transpeptidase C-terminal domain YkuD PF03734.14 CTQ28870.1 - 1.2e-16 61.4 0.0 1.9e-16 60.8 0.0 1.2 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain LysR_substrate PF03466.20 CTQ28871.1 - 8.3e-41 139.7 0.3 1.3e-40 139.0 0.2 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28871.1 - 4.7e-13 48.9 0.0 1.1e-12 47.7 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 CTQ28871.1 - 0.00093 18.7 0.1 0.0028 17.2 0.1 1.9 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 CTQ28871.1 - 0.0016 18.5 0.6 0.0075 16.4 0.3 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 CTQ28871.1 - 0.0097 15.8 0.1 0.02 14.8 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF1670 PF07900.11 CTQ28871.1 - 0.055 12.8 0.0 0.089 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) HTH_Crp_2 PF13545.6 CTQ28871.1 - 0.056 13.4 0.1 0.15 12.1 0.1 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MarR PF01047.22 CTQ28871.1 - 0.058 13.3 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 MarR family Sigma70_r4 PF04545.16 CTQ28871.1 - 0.07 12.7 0.6 0.38 10.3 0.2 2.5 3 0 0 3 3 3 0 Sigma-70, region 4 HTH_20 PF12840.7 CTQ28871.1 - 0.08 13.0 0.0 0.31 11.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 CTQ28871.1 - 0.081 12.7 0.1 0.64 9.9 0.0 2.5 3 0 0 3 3 3 0 IclR helix-turn-helix domain Mga PF05043.13 CTQ28871.1 - 0.11 13.1 0.1 0.57 10.8 0.1 1.9 2 0 0 2 2 2 0 Mga helix-turn-helix domain HTH_11 PF08279.12 CTQ28871.1 - 0.14 12.1 0.1 0.31 11.0 0.1 1.6 1 0 0 1 1 1 0 HTH domain UPF0122 PF04297.14 CTQ28871.1 - 0.16 12.2 0.0 0.51 10.6 0.0 1.9 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like LysR_substrate PF03466.20 CTQ28872.1 - 2.9e-31 108.5 0.4 3.9e-31 108.0 0.4 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28872.1 - 1.3e-21 76.3 0.1 3.2e-21 75.0 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family NMT1_2 PF13379.6 CTQ28872.1 - 0.11 12.2 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 NMT1-like family Chorismate_bind PF00425.18 CTQ28873.1 - 5.9e-69 232.5 0.0 7.4e-69 232.2 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme MFS_1 PF07690.16 CTQ28874.1 - 3.1e-13 49.4 89.4 4e-09 35.9 49.1 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Acatn PF13000.7 CTQ28874.1 - 9.5e-05 21.1 4.3 0.00028 19.5 4.3 1.7 1 1 0 1 1 1 1 Acetyl-coenzyme A transporter 1 ABC_tran PF00005.27 CTQ28875.1 - 1.2e-29 103.6 0.0 2.1e-29 102.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 CTQ28875.1 - 1.8e-07 31.1 7.2 4.4e-07 29.8 6.9 1.8 1 1 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 CTQ28875.1 - 3.2e-07 30.0 0.0 2.1e-05 24.1 0.0 2.3 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain Zeta_toxin PF06414.12 CTQ28875.1 - 0.0013 18.0 0.0 0.0028 17.0 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_16 PF13191.6 CTQ28875.1 - 0.0057 17.0 0.2 0.022 15.1 0.2 2.1 1 1 0 1 1 1 1 AAA ATPase domain SRP54 PF00448.22 CTQ28875.1 - 0.0081 15.8 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain RsgA_GTPase PF03193.16 CTQ28875.1 - 0.0089 15.9 0.0 0.017 15.0 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_21 PF13304.6 CTQ28875.1 - 0.018 14.9 0.0 2 8.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 CTQ28875.1 - 0.021 15.1 0.0 0.082 13.2 0.0 2.0 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CTQ28875.1 - 0.03 14.5 0.5 0.87 9.7 0.0 2.8 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 CTQ28875.1 - 0.043 13.5 0.4 0.32 10.7 0.0 2.3 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.6 CTQ28875.1 - 0.082 13.5 0.0 0.22 12.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain CytB6-F_Fe-S PF08802.10 CTQ28875.1 - 0.11 12.6 0.3 0.52 10.4 0.3 2.2 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit AAA PF00004.29 CTQ28875.1 - 0.2 12.1 0.4 1.7 9.0 0.1 2.7 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF2061 PF09834.9 CTQ28875.1 - 1.5 9.3 6.7 0.43 11.1 1.7 2.5 2 0 0 2 2 2 0 Predicted membrane protein (DUF2061) ABC_tran PF00005.27 CTQ28876.1 - 2e-32 112.6 0.0 3.8e-32 111.7 0.0 1.5 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 CTQ28876.1 - 2.3e-21 76.6 0.9 3.5e-21 76.1 0.9 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_16 PF13191.6 CTQ28876.1 - 3.4e-06 27.5 0.3 9.3e-06 26.1 0.3 1.7 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 CTQ28876.1 - 4.1e-06 26.4 0.0 0.00034 20.1 0.0 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ28876.1 - 7.3e-05 22.7 0.0 0.00014 21.8 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 CTQ28876.1 - 0.00013 22.3 0.0 0.0014 18.9 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 CTQ28876.1 - 0.00068 20.1 0.0 0.011 16.2 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 CTQ28876.1 - 0.00086 18.6 0.3 0.0049 16.2 0.0 2.3 3 0 0 3 3 3 1 Zeta toxin AAA_30 PF13604.6 CTQ28876.1 - 0.0021 17.8 0.0 0.0067 16.2 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CTQ28876.1 - 0.0049 17.0 0.0 0.016 15.3 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 CTQ28876.1 - 0.0053 16.6 0.0 0.11 12.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 CTQ28876.1 - 0.0071 15.9 3.8 0.062 12.9 0.0 2.8 3 0 0 3 3 3 1 AAA domain AAA_29 PF13555.6 CTQ28876.1 - 0.019 14.7 0.0 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 CTQ28876.1 - 0.02 15.4 0.0 0.042 14.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 CTQ28876.1 - 0.028 14.2 0.0 0.29 10.9 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_24 PF13479.6 CTQ28876.1 - 0.035 13.8 0.0 0.078 12.7 0.0 1.7 1 1 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 CTQ28876.1 - 0.052 13.3 0.0 0.096 12.4 0.0 1.4 1 0 0 1 1 1 0 Cytidylate kinase Sigma54_activat PF00158.26 CTQ28876.1 - 0.088 12.5 0.1 1.4 8.6 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_5 PF07728.14 CTQ28876.1 - 0.096 12.7 0.0 0.36 10.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF1995 PF09353.10 CTQ28876.1 - 0.12 12.4 0.2 0.53 10.3 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1995) DUF2207 PF09972.9 CTQ28876.1 - 0.13 11.0 8.0 0.047 12.5 0.5 2.3 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) AAA_14 PF13173.6 CTQ28876.1 - 0.13 12.3 0.0 2.8 8.0 0.0 2.9 3 1 0 3 3 3 0 AAA domain AAA_7 PF12775.7 CTQ28876.1 - 0.16 11.5 0.0 0.32 10.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region NB-ARC PF00931.22 CTQ28876.1 - 0.17 11.1 0.0 1.9 7.6 0.0 2.4 3 0 0 3 3 3 0 NB-ARC domain MMR_HSR1 PF01926.23 CTQ28876.1 - 0.21 11.7 0.0 0.8 9.8 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase HTH_18 PF12833.7 CTQ28877.1 - 1.5e-18 66.8 0.7 1.5e-18 66.8 0.7 2.2 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ28877.1 - 1.5e-07 31.3 0.1 5.6e-07 29.5 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_7 PF02796.15 CTQ28877.1 - 0.0053 16.8 0.0 7.7 6.7 0.0 3.0 3 0 0 3 3 3 2 Helix-turn-helix domain of resolvase Sigma70_r3 PF04539.16 CTQ28877.1 - 0.044 13.9 0.0 0.079 13.1 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 region 3 AMP-binding PF00501.28 CTQ28878.1 - 3.4e-93 312.5 0.0 5e-93 312.0 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme Condensation PF00668.20 CTQ28878.1 - 4e-52 177.4 0.0 1.2e-26 93.5 0.0 2.2 2 0 0 2 2 2 2 Condensation domain PP-binding PF00550.25 CTQ28878.1 - 4.6e-30 103.8 0.2 3.2e-09 37.0 0.0 3.9 3 0 0 3 3 3 3 Phosphopantetheine attachment site AMP-binding_C PF13193.6 CTQ28878.1 - 2.1e-10 41.4 0.1 8.2e-05 23.5 0.0 2.7 2 0 0 2 2 2 2 AMP-binding enzyme C-terminal domain Methyltransf_12 PF08242.12 CTQ28878.1 - 1e-09 39.0 0.0 2.9e-09 37.6 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ28878.1 - 5e-08 33.0 0.1 7.9e-07 29.1 0.0 2.9 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ28878.1 - 2.8e-07 31.1 0.0 9.2e-07 29.5 0.0 2.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ28878.1 - 1.9e-05 25.2 0.0 5.2e-05 23.8 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ28878.1 - 0.00066 19.5 0.0 0.0014 18.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain ketoacyl-synt PF00109.26 CTQ28879.1 - 1.2e-74 251.1 0.0 2.4e-74 250.1 0.0 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Acyl_transf_1 PF00698.21 CTQ28879.1 - 1.2e-52 179.4 0.9 2e-52 178.7 0.9 1.3 1 0 0 1 1 1 1 Acyl transferase domain Methyltransf_12 PF08242.12 CTQ28879.1 - 1.1e-41 141.5 0.1 1.1e-21 77.5 0.0 3.0 3 0 0 3 3 2 2 Methyltransferase domain Ketoacyl-synt_C PF02801.22 CTQ28879.1 - 5.2e-40 136.1 0.1 1.2e-39 134.9 0.1 1.7 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KR PF08659.10 CTQ28879.1 - 1.7e-37 129.1 3.8 5.8e-37 127.3 0.8 3.1 3 0 0 3 3 3 1 KR domain Condensation PF00668.20 CTQ28879.1 - 9.8e-33 113.5 0.8 1.7e-32 112.7 0.8 1.3 1 0 0 1 1 1 1 Condensation domain PP-binding PF00550.25 CTQ28879.1 - 1.5e-24 86.1 0.4 4.1e-13 49.5 0.0 3.2 3 0 0 3 3 3 2 Phosphopantetheine attachment site Methyltransf_25 PF13649.6 CTQ28879.1 - 2.5e-22 79.4 0.0 2.2e-10 41.1 0.0 3.3 2 0 0 2 2 2 2 Methyltransferase domain Thioesterase PF00975.20 CTQ28879.1 - 9.4e-21 75.0 1.0 2.9e-20 73.4 1.0 2.0 1 1 0 1 1 1 1 Thioesterase domain Methyltransf_23 PF13489.6 CTQ28879.1 - 1.5e-20 73.7 0.0 3.6e-10 39.9 0.0 2.9 3 0 0 3 3 2 2 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ28879.1 - 1e-17 64.3 0.0 4e-09 36.4 0.0 2.6 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ28879.1 - 1.2e-17 64.3 0.0 2.6e-08 34.4 0.0 2.8 2 0 0 2 2 2 2 Methyltransferase domain KAsynt_C_assoc PF16197.5 CTQ28879.1 - 6.1e-15 55.7 0.0 1.4e-13 51.2 0.0 2.8 3 0 0 3 3 2 1 Ketoacyl-synthetase C-terminal extension Ubie_methyltran PF01209.18 CTQ28879.1 - 1.2e-10 41.2 0.0 0.00028 20.3 0.0 2.3 2 0 0 2 2 2 2 ubiE/COQ5 methyltransferase family adh_short_C2 PF13561.6 CTQ28879.1 - 7.6e-08 32.2 0.1 7.6e-08 32.2 0.1 1.8 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase Methyltransf_33 PF10017.9 CTQ28879.1 - 1.1e-07 31.3 0.0 1.1e-05 24.7 0.0 2.4 2 0 0 2 2 2 1 Histidine-specific methyltransferase, SAM-dependent adh_short PF00106.25 CTQ28879.1 - 1.4e-07 31.2 0.0 2.9e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 short chain dehydrogenase Thiolase_N PF00108.23 CTQ28879.1 - 8.5e-07 28.6 0.4 1.7e-06 27.6 0.4 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain DUF938 PF06080.12 CTQ28879.1 - 3.3e-06 27.0 0.0 0.015 15.0 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF938) Methyltransf_16 PF10294.9 CTQ28879.1 - 2.8e-05 23.9 0.0 0.0055 16.4 0.0 2.5 2 0 0 2 2 2 1 Lysine methyltransferase Methyltransf_2 PF00891.18 CTQ28879.1 - 4.7e-05 22.8 0.0 0.0026 17.1 0.0 2.4 2 0 0 2 2 2 1 O-methyltransferase domain Methyltransf_28 PF02636.17 CTQ28879.1 - 0.0078 15.9 0.0 2.3 7.8 0.0 2.4 2 0 0 2 2 2 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_24 PF13578.6 CTQ28879.1 - 0.01 16.8 0.1 0.65 11.1 0.0 3.5 2 0 0 2 2 2 0 Methyltransferase domain Hydrolase_4 PF12146.8 CTQ28879.1 - 0.028 13.7 0.1 0.15 11.3 0.0 2.2 2 0 0 2 2 2 0 Serine aminopeptidase, S33 RrnaAD PF00398.20 CTQ28879.1 - 0.041 13.0 0.0 3.4 6.6 0.0 2.3 2 0 0 2 2 2 0 Ribosomal RNA adenine dimethylase Epimerase PF01370.21 CTQ28879.1 - 0.047 13.1 0.1 0.087 12.3 0.1 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family GFO_IDH_MocA PF01408.22 CTQ28880.1 - 2.7e-24 86.3 0.0 5.3e-24 85.3 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Thioesterase PF00975.20 CTQ28881.1 - 8.8e-67 225.6 0.2 1e-66 225.4 0.2 1.0 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_6 PF12697.7 CTQ28881.1 - 1.2e-05 26.0 8.1 2.3e-05 25.1 8.1 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 CTQ28881.1 - 0.00017 21.0 0.0 0.0014 17.9 0.0 2.0 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 CTQ28881.1 - 0.0017 18.0 0.0 0.083 12.5 0.0 2.2 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 CTQ28881.1 - 0.012 15.5 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 CTQ28881.1 - 0.12 12.2 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase Chlorophyllase2 PF12740.7 CTQ28881.1 - 0.18 10.7 0.0 0.29 10.0 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme AMP-binding PF00501.28 CTQ28882.1 - 9.3e-79 265.0 0.0 1.1e-78 264.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CTQ28882.1 - 6.3e-15 55.9 0.2 9.1e-14 52.2 0.0 2.7 3 0 0 3 3 3 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 CTQ28882.1 - 0.046 12.6 0.0 7.7 5.2 0.0 2.1 2 0 0 2 2 2 0 GH3 auxin-responsive promoter TonB_dep_Rec PF00593.24 CTQ28883.1 - 2.9e-48 165.9 26.8 3.7e-48 165.6 26.8 1.2 1 0 0 1 1 1 1 TonB dependent receptor Plug PF07715.15 CTQ28883.1 - 8.8e-15 55.2 1.9 1.8e-14 54.2 1.9 1.5 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain OMP_b-brl_3 PF14905.6 CTQ28883.1 - 5.5e-07 28.9 2.2 7e-06 25.3 0.4 2.6 2 1 0 2 2 2 1 Outer membrane protein beta-barrel family OMP_b-brl PF13505.6 CTQ28883.1 - 0.0014 18.8 3.8 0.0043 17.2 3.8 1.9 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain DUF481 PF04338.12 CTQ28883.1 - 0.11 12.5 3.1 2 8.4 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function, DUF481 hnRNP_Q_AcD PF18360.1 CTQ28885.1 - 0.13 12.3 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain Phage_AlpA PF05930.12 CTQ28886.1 - 8.3e-26 89.6 0.2 9.4e-26 89.4 0.2 1.1 1 0 0 1 1 1 1 Prophage CP4-57 regulatory protein (AlpA) HTH_17 PF12728.7 CTQ28886.1 - 0.0003 20.9 0.1 0.00036 20.7 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2857 PF11198.8 CTQ28888.1 - 2.3e-63 213.1 0.0 2.6e-63 212.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2857) zf-dskA_traR PF01258.17 CTQ28889.1 - 5.4e-11 42.2 0.6 5.4e-11 42.2 0.6 1.6 2 0 0 2 2 2 1 Prokaryotic dksA/traR C4-type zinc finger HypA PF01155.19 CTQ28889.1 - 0.013 15.6 0.7 0.016 15.2 0.7 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2116 PF09889.9 CTQ28889.1 - 0.013 15.5 2.9 0.013 15.5 2.9 2.1 2 1 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DZR PF12773.7 CTQ28889.1 - 0.03 14.3 2.6 0.093 12.8 2.6 1.8 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 CTQ28889.1 - 0.049 13.1 0.6 5.3 6.6 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain C1_1 PF00130.22 CTQ28889.1 - 0.1 12.5 2.1 0.21 11.5 1.2 2.0 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) AAA_13 PF13166.6 CTQ28889.1 - 0.15 10.6 0.5 0.17 10.5 0.5 1.1 1 0 0 1 1 1 0 AAA domain FYVE PF01363.21 CTQ28889.1 - 0.66 10.2 5.2 3.8 7.7 4.4 2.2 1 1 0 1 1 1 0 FYVE zinc finger HHA PF05321.11 CTQ28890.1 - 1.3e-14 54.3 0.0 1.4e-14 54.2 0.0 1.0 1 0 0 1 1 1 1 Haemolysin expression modulating protein SLT PF01464.20 CTQ28893.1 - 5.3e-18 64.8 0.0 7.4e-18 64.3 0.0 1.2 1 0 0 1 1 1 1 Transglycosylase SLT domain TrbC PF04956.13 CTQ28894.1 - 8.5e-19 67.6 3.3 9e-19 67.5 3.3 1.0 1 0 0 1 1 1 1 TrbC/VIRB2 family CagE_TrbE_VirB PF03135.14 CTQ28895.1 - 4.8e-43 147.7 0.0 1e-42 146.6 0.0 1.6 1 0 0 1 1 1 1 CagE, TrbE, VirB family, component of type IV transporter system VirB3 PF05101.13 CTQ28895.1 - 1.1e-13 51.1 4.7 2.7e-13 50.0 4.7 1.6 1 0 0 1 1 1 1 Type IV secretory pathway, VirB3-like protein TrwB_AAD_bind PF10412.9 CTQ28895.1 - 0.0066 15.4 0.0 0.52 9.1 0.0 2.2 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain AAA_23 PF13476.6 CTQ28895.1 - 0.012 16.2 0.0 0.12 12.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 CTQ28895.1 - 0.028 14.1 0.0 0.063 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain T4SS PF07996.11 CTQ28896.1 - 2.7e-46 158.5 10.4 3.5e-46 158.1 10.4 1.1 1 0 0 1 1 1 1 Type IV secretion system proteins BLOC1_2 PF10046.9 CTQ28896.1 - 0.011 16.0 1.0 0.011 16.0 1.0 3.1 2 2 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Peptidase_M16_C PF05193.21 CTQ28896.1 - 0.05 13.6 0.2 0.16 11.9 0.1 1.8 1 1 0 2 2 2 0 Peptidase M16 inactive domain DUF4296 PF14129.6 CTQ28897.1 - 0.039 14.5 0.0 0.06 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4296) TrbL PF04610.14 CTQ28898.1 - 2.6e-42 145.0 19.4 2.6e-42 145.0 19.4 1.6 1 1 0 1 1 1 1 TrbL/VirB6 plasmid conjugal transfer protein DUF1129 PF06570.11 CTQ28898.1 - 2.8 7.4 13.7 0.75 9.2 9.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) Bac_export_2 PF01312.19 CTQ28898.1 - 5.8 6.0 12.8 1.8 7.7 7.3 2.3 2 0 0 2 2 2 0 FlhB HrpN YscU SpaS Family VirB8 PF04335.13 CTQ28899.1 - 1.6e-54 185.0 6.0 1.8e-54 184.8 6.0 1.0 1 0 0 1 1 1 1 VirB8 protein CagX PF03524.15 CTQ28900.1 - 1.6e-54 184.8 2.9 2.8e-54 184.0 2.9 1.4 1 1 0 1 1 1 1 Conjugal transfer protein TrbI PF03743.14 CTQ28901.1 - 3.4e-42 144.4 0.2 6.8e-42 143.4 0.0 1.6 2 0 0 2 2 2 1 Bacterial conjugation TrbI-like protein T2SSE PF00437.20 CTQ28902.1 - 5.2e-40 137.2 0.0 6.6e-40 136.9 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_7 PF12775.7 CTQ28902.1 - 0.0024 17.4 0.0 0.0038 16.8 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region ABC_tran PF00005.27 CTQ28902.1 - 0.05 14.1 0.0 0.082 13.4 0.0 1.3 1 0 0 1 1 1 0 ABC transporter MetallophosN PF16371.5 CTQ28902.1 - 0.16 12.2 0.0 0.35 11.2 0.0 1.5 1 0 0 1 1 1 0 N terminal of Calcineurin-like phosphoesterase TrbM PF07424.11 CTQ28904.1 - 0.00028 20.9 0.7 0.00035 20.6 0.1 1.4 2 0 0 2 2 2 1 TrbM T4SS-DNA_transf PF02534.14 CTQ28906.1 - 3.8e-08 32.6 0.0 0.00024 20.1 0.0 2.8 2 1 1 3 3 3 2 Type IV secretory system Conjugative DNA transfer TrwB_AAD_bind PF10412.9 CTQ28906.1 - 1.4e-07 30.8 0.0 0.0017 17.4 0.0 2.3 2 1 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain TraG-D_C PF12696.7 CTQ28906.1 - 2.1e-05 24.5 0.0 3.8e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 TraM recognition site of TraD and TraG AAA_10 PF12846.7 CTQ28906.1 - 3e-05 23.1 0.0 4.9e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain DUF87 PF01935.17 CTQ28906.1 - 0.00022 21.4 0.0 0.00035 20.7 0.0 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain DUF1129 PF06570.11 CTQ28906.1 - 2 7.9 4.1 30 4.0 3.9 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1129) Cytochrom_C550 PF14495.6 CTQ28907.1 - 0.12 12.1 0.0 0.29 10.8 0.0 1.6 2 0 0 2 2 2 0 Cytochrome c-550 domain DEAD PF00270.29 CTQ28908.1 - 3.6e-17 62.7 0.0 7.1e-17 61.7 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 CTQ28908.1 - 1.2e-08 35.2 0.0 2.1e-08 34.3 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 CTQ28908.1 - 5.3e-06 26.8 0.0 2.3e-05 24.7 0.0 2.1 1 1 0 1 1 1 1 Helicase conserved C-terminal domain TRAPPC-Trs85 PF12739.7 CTQ28908.1 - 0.21 10.5 0.1 0.38 9.7 0.1 1.3 1 0 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit DUF1837 PF08878.11 CTQ28909.1 - 2.2e-09 37.5 0.0 3.2e-09 36.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1837) SPRY PF00622.28 CTQ28909.1 - 0.035 14.2 0.0 0.076 13.1 0.0 1.7 2 0 0 2 2 2 0 SPRY domain MPTase-PolyVal PF18818.1 CTQ28910.1 - 1.8e-47 160.5 0.0 2.9e-47 159.8 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase superfamily domain DUF1738 PF08401.11 CTQ28910.1 - 1.2e-35 122.4 0.1 2.2e-35 121.5 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1738) EpmC PF04315.12 CTQ28910.1 - 0.019 14.7 0.0 0.035 13.8 0.0 1.4 1 0 0 1 1 1 0 Elongation factor P hydroxylase Tox-MPTase3 PF15639.6 CTQ28910.1 - 0.039 13.8 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 Metallopeptidase toxin 3 mCpol PF18182.1 CTQ28912.1 - 1.3e-34 118.9 1.7 1.4e-34 118.8 1.7 1.0 1 0 0 1 1 1 1 minimal CRISPR polymerase domain Peptidase_M73 PF12389.8 CTQ28912.1 - 0.0091 15.9 0.3 0.012 15.5 0.3 1.1 1 0 0 1 1 1 1 Camelysin metallo-endopeptidase Prok-JAB PF14464.6 CTQ28914.1 - 4.2e-12 45.9 0.0 5.3e-12 45.5 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.21 CTQ28914.1 - 0.0083 16.1 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-E2_B PF14461.6 CTQ28915.1 - 1.4e-25 89.5 0.0 3.2e-25 88.4 0.0 1.6 1 0 0 1 1 1 1 Prokaryotic E2 family B ThiF PF00899.21 CTQ28915.1 - 7.2e-20 71.4 0.0 1.1e-19 70.8 0.0 1.2 1 0 0 1 1 1 1 ThiF family Fic PF02661.18 CTQ28915.1 - 0.039 14.8 0.0 0.4 11.6 0.0 2.5 2 0 0 2 2 2 0 Fic/DOC family NAD_binding_7 PF13241.6 CTQ28915.1 - 0.11 12.9 0.0 0.41 11.1 0.0 1.9 1 1 0 1 1 1 0 Putative NAD(P)-binding Patatin PF01734.22 CTQ28917.1 - 2.2e-28 99.9 0.1 3.5e-28 99.2 0.1 1.3 1 0 0 1 1 1 1 Patatin-like phospholipase Ald_deCOase PF11266.8 CTQ28917.1 - 0.1 12.3 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Long-chain fatty aldehyde decarbonylase SMODS PF18144.1 CTQ28921.1 - 8.8e-06 26.0 1.0 3.7e-05 23.9 0.2 2.2 2 1 0 2 2 2 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain NTP_transf_2 PF01909.23 CTQ28921.1 - 0.00043 20.5 0.1 0.00086 19.6 0.1 1.6 1 0 0 1 1 1 1 Nucleotidyltransferase domain Patatin PF01734.22 CTQ28922.1 - 1.4e-25 90.7 2.0 1.3e-24 87.5 2.0 2.1 1 1 0 1 1 1 1 Patatin-like phospholipase MdcE PF06833.11 CTQ28922.1 - 0.025 14.1 0.1 0.039 13.4 0.1 1.3 1 0 0 1 1 1 0 Malonate decarboxylase gamma subunit (MdcE) Na_H_Exchanger PF00999.21 CTQ28924.1 - 1.7e-64 218.0 43.3 2.1e-64 217.7 43.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TetR_C_13 PF16925.5 CTQ28925.1 - 1.2e-46 157.3 0.3 1.7e-46 156.9 0.3 1.2 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 CTQ28925.1 - 2.7e-08 33.5 0.0 5.1e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 CTQ28925.1 - 0.0005 20.4 0.9 0.0036 17.6 1.1 2.1 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain ADH_zinc_N PF00107.26 CTQ28926.1 - 6.2e-14 52.1 0.1 1.1e-13 51.2 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Epimerase PF01370.21 CTQ28926.1 - 7.8e-05 22.2 0.1 0.00098 18.7 0.1 2.2 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family ADH_N PF08240.12 CTQ28926.1 - 0.00023 21.0 0.0 0.00041 20.2 0.0 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 CTQ28926.1 - 0.0021 17.9 0.0 0.0075 16.2 0.0 1.8 1 1 0 1 1 1 1 N-terminal domain of oxidoreductase adh_short PF00106.25 CTQ28926.1 - 0.0096 15.4 0.0 0.015 14.7 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase AlaDh_PNT_C PF01262.21 CTQ28926.1 - 0.062 12.6 0.3 0.086 12.1 0.3 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain GDP_Man_Dehyd PF16363.5 CTQ28926.1 - 0.24 10.8 0.1 0.38 10.1 0.1 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Gate PF07670.14 CTQ28927.1 - 1.1e-11 45.0 17.7 8.7e-06 26.0 5.5 2.9 2 1 1 3 3 3 2 Nucleoside recognition Hydrolase_4 PF12146.8 CTQ28928.1 - 2.7e-13 49.8 0.0 6.4e-13 48.5 0.0 1.7 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 CTQ28928.1 - 2.3e-07 31.7 15.2 2.3e-07 31.7 15.2 2.3 2 1 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 CTQ28928.1 - 6.6e-07 29.2 0.1 1.2e-06 28.3 0.1 1.5 1 0 0 1 1 1 1 alpha/beta hydrolase fold Chlorophyllase2 PF12740.7 CTQ28928.1 - 0.0063 15.5 0.0 0.011 14.7 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_3 PF07859.13 CTQ28928.1 - 0.0091 15.9 0.1 0.019 14.8 0.1 1.6 1 0 0 1 1 1 1 alpha/beta hydrolase fold Thioesterase PF00975.20 CTQ28928.1 - 0.088 12.9 0.0 0.21 11.7 0.0 1.6 1 0 0 1 1 1 0 Thioesterase domain DUF915 PF06028.11 CTQ28928.1 - 0.2 11.0 0.0 0.34 10.2 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) PmrD PF11183.8 CTQ28929.1 - 1e-37 128.1 0.1 1.1e-37 128.0 0.1 1.0 1 0 0 1 1 1 1 Polymyxin resistance protein PmrD AMNp_N PF10423.9 CTQ28930.1 - 3.1e-51 173.1 0.1 5.5e-51 172.3 0.1 1.4 1 0 0 1 1 1 1 Bacterial AMP nucleoside phosphorylase N-terminus PNP_UDP_1 PF01048.20 CTQ28930.1 - 7.4e-20 71.2 0.0 1.1e-19 70.6 0.0 1.2 1 0 0 1 1 1 1 Phosphorylase superfamily GntR PF00392.21 CTQ28930.1 - 0.19 11.4 0.3 0.63 9.7 0.0 2.0 2 1 0 2 2 2 0 Bacterial regulatory proteins, gntR family MatE PF01554.18 CTQ28931.1 - 4.4e-57 192.2 29.4 3.4e-35 121.1 10.4 2.6 3 0 0 3 3 3 2 MatE Pkinase PF00069.25 CTQ28933.1 - 0.0018 17.7 0.0 0.0049 16.3 0.0 1.7 1 1 0 1 1 1 1 Protein kinase domain B PF02216.16 CTQ28933.1 - 0.8 9.7 3.8 0.83 9.7 0.0 2.6 2 0 0 2 2 2 0 B domain GGDEF PF00990.21 CTQ28934.1 - 2.4e-42 144.4 0.1 3.4e-42 143.9 0.1 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GAF PF01590.26 CTQ28934.1 - 3e-09 37.6 0.0 5.3e-09 36.8 0.0 1.4 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 CTQ28934.1 - 5e-07 30.1 0.0 8.9e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 GAF domain GGDEF_2 PF17853.1 CTQ28934.1 - 0.09 13.0 0.0 0.19 12.0 0.0 1.6 1 0 0 1 1 1 0 GGDEF-like domain GAF_3 PF13492.6 CTQ28934.1 - 0.1 13.0 0.0 0.23 11.8 0.0 1.6 1 0 0 1 1 1 0 GAF domain Abhydrolase_1 PF00561.20 CTQ28935.1 - 4.5e-29 101.9 1.3 9.6e-29 100.8 1.3 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CTQ28935.1 - 1.2e-23 83.6 1.4 2.4e-23 82.6 1.4 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 CTQ28935.1 - 4.5e-20 73.2 1.8 5.7e-20 72.9 1.8 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 CTQ28935.1 - 5.9e-09 35.7 0.8 1.1e-06 28.3 0.0 2.1 2 0 0 2 2 2 2 Prolyl oligopeptidase family DLH PF01738.18 CTQ28935.1 - 3e-05 23.7 0.0 0.0048 16.5 0.0 2.2 1 1 1 2 2 2 2 Dienelactone hydrolase family Abhydrolase_4 PF08386.10 CTQ28935.1 - 0.00014 22.0 0.0 0.0039 17.3 0.0 2.4 2 0 0 2 2 2 1 TAP-like protein Peptidase_S15 PF02129.18 CTQ28935.1 - 0.0014 18.3 0.4 0.026 14.1 0.4 2.1 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) AXE1 PF05448.12 CTQ28935.1 - 0.0014 17.4 0.1 0.022 13.5 0.0 2.4 2 1 1 3 3 3 1 Acetyl xylan esterase (AXE1) Abhydrolase_5 PF12695.7 CTQ28935.1 - 0.0026 17.6 0.2 1.7 8.4 0.1 2.2 2 0 0 2 2 2 2 Alpha/beta hydrolase family DUF915 PF06028.11 CTQ28935.1 - 0.0065 15.8 0.0 0.014 14.7 0.0 1.5 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF915) Esterase_phd PF10503.9 CTQ28935.1 - 0.03 13.8 0.1 0.074 12.5 0.0 1.8 2 0 0 2 2 2 0 Esterase PHB depolymerase Ndr PF03096.14 CTQ28935.1 - 0.046 12.4 0.0 0.067 11.9 0.0 1.2 1 0 0 1 1 1 0 Ndr family EHN PF06441.12 CTQ28935.1 - 0.046 14.1 0.7 0.083 13.3 0.1 1.8 2 0 0 2 2 1 0 Epoxide hydrolase N terminus DUF1129 PF06570.11 CTQ28936.1 - 0.12 11.8 1.3 0.22 11.0 1.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) UbiA PF01040.18 CTQ28936.1 - 0.75 9.0 29.2 0.95 8.7 29.2 1.1 1 0 0 1 1 1 0 UbiA prenyltransferase family LysR_substrate PF03466.20 CTQ28937.1 - 6.6e-31 107.3 6.2 1e-30 106.7 6.2 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28937.1 - 4.8e-18 64.9 1.4 1.6e-17 63.2 1.4 2.0 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_20 PF12840.7 CTQ28937.1 - 0.039 14.0 0.3 0.11 12.6 0.3 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_50 PF18024.1 CTQ28937.1 - 0.047 13.3 2.2 0.075 12.7 0.5 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain DUF1869 PF08956.10 CTQ28938.1 - 6.9e-36 122.0 0.9 1e-34 118.2 0.5 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF1869) DUF1971 PF09313.11 CTQ28939.1 - 7.8e-24 83.5 0.0 9.4e-24 83.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1971) Cupin_2 PF07883.11 CTQ28939.1 - 0.033 13.9 0.1 0.084 12.6 0.0 1.8 2 0 0 2 2 2 0 Cupin domain EAL PF00563.20 CTQ28940.1 - 7.8e-79 264.5 0.0 1e-78 264.2 0.0 1.1 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 CTQ28940.1 - 1.2e-34 119.4 0.0 2.3e-34 118.5 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Gsf2 PF11055.8 CTQ28941.1 - 0.01 14.6 0.3 0.014 14.1 0.3 1.1 1 0 0 1 1 1 0 Glucose signalling factor 2 DUF4079 PF13301.6 CTQ28941.1 - 0.086 13.0 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4079) Oxidored_molyb PF00174.19 CTQ28942.1 - 9.4e-06 25.3 0.0 2.2e-05 24.2 0.0 1.6 1 1 1 2 2 2 1 Oxidoreductase molybdopterin binding domain MFS_1 PF07690.16 CTQ28943.1 - 8.7e-27 94.0 52.3 6.7e-16 58.1 25.2 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ28943.1 - 1.4e-21 76.9 29.7 2.1e-19 69.7 29.7 2.0 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.6 CTQ28943.1 - 8.3e-13 47.7 18.1 8.3e-13 47.7 18.1 2.8 1 1 1 2 2 2 1 MFS/sugar transport protein LysR_substrate PF03466.20 CTQ28945.1 - 2.2e-38 131.7 7.5 2.8e-38 131.4 7.5 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28945.1 - 6.9e-15 54.7 0.0 1.7e-14 53.5 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ28945.1 - 0.0016 18.2 0.0 0.004 16.9 0.0 1.7 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_50 PF18024.1 CTQ28945.1 - 0.026 14.1 0.1 0.062 12.9 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 CTQ28945.1 - 0.052 13.1 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.6 CTQ28945.1 - 0.077 12.8 0.0 0.21 11.4 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_24 PF13412.6 CTQ28945.1 - 0.097 12.2 0.1 0.19 11.3 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_3 PF01381.22 CTQ28945.1 - 0.13 12.3 0.1 0.26 11.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix HTH_8 PF02954.19 CTQ28945.1 - 0.15 11.9 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family HTH_11 PF08279.12 CTQ28945.1 - 0.15 12.0 0.1 0.33 10.9 0.1 1.5 1 0 0 1 1 1 0 HTH domain Tautomerase_2 PF14552.6 CTQ28946.1 - 1.1e-27 96.0 0.1 4.7e-27 93.9 0.0 1.8 1 1 1 2 2 2 1 Tautomerase enzyme Tautomerase PF01361.21 CTQ28946.1 - 5.1e-11 42.3 0.0 2.3e-08 33.9 0.0 2.1 2 0 0 2 2 2 2 Tautomerase enzyme HPP PF04982.13 CTQ28947.1 - 7.2e-41 139.2 12.5 7.2e-41 139.2 12.5 1.9 2 0 0 2 2 2 1 HPP family Tic110 PF16940.5 CTQ28947.1 - 0.057 11.9 0.1 0.093 11.2 0.1 1.2 1 0 0 1 1 1 0 Chloroplast envelope transporter AdoHcyase_NAD PF00670.21 CTQ28948.1 - 5e-34 117.7 0.1 1.1e-33 116.6 0.1 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 CTQ28948.1 - 1.9e-13 50.1 0.1 3.3e-13 49.4 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase PF05221.17 CTQ28948.1 - 4e-12 45.9 0.3 6.4e-12 45.2 0.3 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase IlvN PF07991.12 CTQ28948.1 - 5.5e-07 29.3 0.8 1e-06 28.5 0.8 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 CTQ28948.1 - 1.8e-05 24.8 0.2 6e-05 23.1 0.1 1.8 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 CTQ28948.1 - 0.00021 21.7 0.5 0.00052 20.4 0.5 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 CTQ28948.1 - 0.00028 20.2 1.4 0.00055 19.3 1.4 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain THF_DHG_CYH_C PF02882.19 CTQ28948.1 - 0.00093 18.5 1.4 0.0051 16.1 1.4 2.0 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TrkA_N PF02254.18 CTQ28948.1 - 0.002 18.4 0.4 0.0059 16.9 0.4 1.8 1 1 0 1 1 1 1 TrkA-N domain F420_oxidored PF03807.17 CTQ28948.1 - 0.0086 16.6 1.1 0.018 15.6 1.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 CTQ28948.1 - 0.031 14.2 0.9 0.055 13.3 0.9 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 CTQ28948.1 - 0.034 14.1 1.6 0.034 14.1 1.6 2.5 4 0 0 4 4 4 0 Zinc-binding dehydrogenase DUF1188 PF06690.11 CTQ28948.1 - 0.034 13.7 0.0 0.05 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Sacchrp_dh_NADP PF03435.18 CTQ28948.1 - 0.073 13.3 0.4 0.14 12.4 0.4 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DBI_PRT PF02277.17 CTQ28949.1 - 3.9e-115 384.6 14.1 4.4e-115 384.4 14.1 1.0 1 0 0 1 1 1 1 Phosphoribosyltransferase CobS PF02654.15 CTQ28950.1 - 1.5e-53 182.1 20.6 1.7e-53 181.9 20.6 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase DUF496 PF04363.12 CTQ28951.1 - 6.6e-46 154.3 9.4 7.5e-46 154.1 9.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF496) FbpA PF05833.11 CTQ28951.1 - 0.0057 15.5 0.6 0.0063 15.3 0.6 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) FUSC PF04632.12 CTQ28952.1 - 1.5e-15 56.8 6.2 2.1e-15 56.3 6.2 1.2 1 0 0 1 1 1 1 Fusaric acid resistance protein family FUSC_2 PF13515.6 CTQ28952.1 - 7.2e-14 52.0 10.6 1.2e-13 51.3 10.4 1.5 1 1 0 1 1 1 1 Fusaric acid resistance protein-like GtrA PF04138.14 CTQ28952.1 - 0.1 12.8 0.2 0.1 12.8 0.2 2.4 2 0 0 2 2 2 0 GtrA-like protein DUF21 PF01595.20 CTQ28952.1 - 0.42 10.3 7.4 1.3 8.7 0.1 2.4 1 1 1 2 2 2 0 Cyclin M transmembrane N-terminal domain GyrI-like PF06445.15 CTQ28953.1 - 3.2e-20 73.0 0.2 3.5e-20 72.9 0.2 1.0 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 CTQ28953.1 - 5.5e-19 68.8 0.0 6.2e-19 68.6 0.0 1.0 1 0 0 1 1 1 1 Integron-associated effector binding protein Peptidase_S11 PF00768.20 CTQ28954.1 - 1.1e-96 323.0 0.0 1.5e-96 322.5 0.0 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase PBP5_C PF07943.13 CTQ28954.1 - 9.7e-25 86.6 0.3 1.5e-24 86.0 0.3 1.3 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain Beta-lactamase2 PF13354.6 CTQ28954.1 - 2.4e-11 43.6 0.0 3.3e-11 43.2 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 CTQ28954.1 - 0.02 14.2 0.2 0.9 8.7 0.0 2.3 2 0 0 2 2 2 0 Beta-lactamase Exonuc_X-T_C PF08411.10 CTQ28955.1 - 7.6e-101 336.7 0.6 9.4e-101 336.4 0.6 1.1 1 0 0 1 1 1 1 Exonuclease C-terminal RNase_T PF00929.24 CTQ28955.1 - 2.5e-30 106.2 0.0 5.2e-30 105.2 0.0 1.6 1 0 0 1 1 1 1 Exonuclease CTD_bind PF04818.13 CTQ28955.1 - 0.065 14.1 1.0 0.55 11.1 0.2 2.6 3 0 0 3 3 3 0 RNA polymerase II-binding domain. GTP_EFTU PF00009.27 CTQ28956.1 - 7.8e-65 218.1 0.0 1.1e-64 217.5 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 CTQ28956.1 - 7.2e-48 161.4 0.0 1.3e-47 160.6 0.0 1.4 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 CTQ28956.1 - 3.1e-36 123.3 0.0 6.8e-36 122.2 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 CTQ28956.1 - 1.3e-31 108.5 0.2 3.1e-31 107.3 0.2 1.7 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 CTQ28956.1 - 2.3e-18 66.3 0.2 8.7e-18 64.5 0.1 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 2 RF3_C PF16658.5 CTQ28956.1 - 1.5e-06 28.0 0.0 3e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain MMR_HSR1 PF01926.23 CTQ28956.1 - 0.026 14.6 0.0 0.048 13.7 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase HTH_20 PF12840.7 CTQ28957.1 - 6e-12 45.4 0.1 1e-11 44.7 0.1 1.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 CTQ28957.1 - 5.1e-05 23.0 0.0 0.0001 22.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF3459 PF11941.8 CTQ28957.1 - 0.14 12.5 1.0 0.71 10.2 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3459) AA_permease_2 PF13520.6 CTQ28958.1 - 1.3e-33 116.5 38.3 1.7e-33 116.1 38.3 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 CTQ28958.1 - 1.5e-33 116.1 36.6 1.9e-33 115.8 36.6 1.1 1 0 0 1 1 1 1 Amino acid permease LysR_substrate PF03466.20 CTQ28959.1 - 9.8e-24 83.9 6.8 1.3e-22 80.2 6.8 2.1 1 1 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ28959.1 - 1.1e-14 54.1 0.0 2e-14 53.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Epimerase PF01370.21 CTQ28960.1 - 3.2e-08 33.4 0.0 5.2e-07 29.4 0.0 2.1 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_2 PF03446.15 CTQ28960.1 - 0.00045 20.4 0.0 0.00062 20.0 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 CTQ28960.1 - 0.00063 19.4 0.0 0.0026 17.4 0.0 1.8 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_10 PF13460.6 CTQ28960.1 - 0.00082 19.3 0.0 0.0011 19.0 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding 3HCDH_N PF02737.18 CTQ28960.1 - 0.07 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3Beta_HSD PF01073.19 CTQ28960.1 - 0.2 10.6 0.0 0.26 10.3 0.0 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family HisG PF01634.18 CTQ28961.1 - 3e-48 163.8 0.0 4.1e-48 163.4 0.0 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 CTQ28961.1 - 8e-25 86.8 0.1 1.7e-24 85.7 0.1 1.6 1 0 0 1 1 1 1 HisG, C-terminal domain Toprim_3 PF13362.6 CTQ28961.1 - 0.037 14.4 0.0 2.8 8.4 0.0 2.4 1 1 1 2 2 2 0 Toprim domain NMT1 PF09084.11 CTQ28961.1 - 0.12 12.3 0.0 0.54 10.2 0.0 1.9 1 1 0 1 1 1 0 NMT1/THI5 like Histidinol_dh PF00815.20 CTQ28962.1 - 1.1e-162 541.8 4.1 1.2e-162 541.6 4.1 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase Aminotran_1_2 PF00155.21 CTQ28963.1 - 1.4e-64 218.6 0.0 1.6e-64 218.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II MLTR_LBD PF17765.1 CTQ28963.1 - 0.025 14.7 0.0 0.043 13.9 0.0 1.4 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain Cys_Met_Meta_PP PF01053.20 CTQ28963.1 - 0.035 12.6 0.0 0.05 12.1 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.13 CTQ28963.1 - 0.071 12.0 0.0 0.1 11.5 0.0 1.2 1 0 0 1 1 1 0 Allinase IGPD PF00475.18 CTQ28964.1 - 9.6e-65 217.3 0.4 1.4e-64 216.8 0.4 1.2 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase HAD_2 PF13419.6 CTQ28964.1 - 9.6e-06 25.8 0.0 0.004 17.3 0.0 2.4 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase PNK3P PF08645.11 CTQ28964.1 - 1.2e-05 25.1 0.0 3.4e-05 23.6 0.0 1.8 2 0 0 2 2 2 1 Polynucleotide kinase 3 phosphatase Hydrolase_like PF13242.6 CTQ28964.1 - 1.4e-05 25.0 0.0 3.2e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 CTQ28964.1 - 0.097 12.8 0.0 0.3 11.2 0.0 1.9 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ28964.1 - 0.15 12.3 0.0 0.99 9.6 0.0 2.3 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase GATase PF00117.28 CTQ28965.1 - 2.3e-18 66.7 0.0 2.5e-18 66.5 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 CTQ28965.1 - 3.1e-07 30.4 0.0 0.00033 20.6 0.0 2.1 2 0 0 2 2 2 2 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 CTQ28965.1 - 3.7e-07 30.1 0.1 0.0033 17.2 0.0 2.1 2 0 0 2 2 2 2 Peptidase C26 GATase_3 PF07685.14 CTQ28965.1 - 1.9e-05 24.4 0.0 2.7e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain His_biosynth PF00977.21 CTQ28966.1 - 2.3e-74 249.7 0.1 2.6e-74 249.5 0.1 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein PEP_mutase PF13714.6 CTQ28966.1 - 1.9e-05 24.2 0.1 7e-05 22.4 0.1 1.8 2 0 0 2 2 2 1 Phosphoenolpyruvate phosphomutase NMO PF03060.15 CTQ28966.1 - 6.3e-05 22.5 3.9 0.0087 15.5 1.1 2.1 2 0 0 2 2 2 2 Nitronate monooxygenase Trp_syntA PF00290.20 CTQ28966.1 - 0.00015 20.8 1.3 0.00027 19.9 0.2 1.8 2 0 0 2 2 2 1 Tryptophan synthase alpha chain TMP-TENI PF02581.17 CTQ28966.1 - 0.00022 20.6 0.7 0.038 13.3 0.2 2.1 2 0 0 2 2 2 2 Thiamine monophosphate synthase Dus PF01207.17 CTQ28966.1 - 0.00026 20.2 0.1 0.58 9.2 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) IGPS PF00218.21 CTQ28966.1 - 0.00037 19.7 0.0 0.16 11.1 0.0 2.2 2 0 0 2 2 2 2 Indole-3-glycerol phosphate synthase NanE PF04131.14 CTQ28966.1 - 0.003 16.8 0.3 0.0089 15.2 0.0 1.8 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 CTQ28966.1 - 0.0061 15.9 1.2 0.0091 15.3 0.3 1.6 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 CTQ28966.1 - 0.031 13.3 0.8 0.14 11.1 0.1 1.9 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 CTQ28966.1 - 0.07 12.1 5.7 1.1 8.2 1.5 2.2 2 0 0 2 2 2 0 FMN-dependent dehydrogenase G3P_antiterm PF04309.12 CTQ28966.1 - 0.11 11.9 0.1 0.22 10.9 0.1 1.5 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator His_biosynth PF00977.21 CTQ28967.1 - 3.4e-77 259.0 0.7 3.8e-77 258.8 0.7 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 CTQ28967.1 - 8.8e-07 28.3 0.1 0.00026 20.2 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.15 CTQ28967.1 - 6.5e-05 22.5 0.5 0.02 14.3 0.1 2.1 2 0 0 2 2 2 2 Nitronate monooxygenase ThiG PF05690.14 CTQ28967.1 - 0.00014 21.2 0.2 0.0024 17.2 0.1 2.0 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 CTQ28967.1 - 0.0013 18.1 0.0 0.089 12.1 0.0 2.3 2 0 0 2 2 2 1 Thiamine monophosphate synthase FMN_dh PF01070.18 CTQ28967.1 - 0.038 13.0 0.1 0.33 9.9 0.1 1.8 1 1 1 2 2 2 0 FMN-dependent dehydrogenase G3P_antiterm PF04309.12 CTQ28967.1 - 0.073 12.5 0.0 0.54 9.6 0.0 2.1 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator DHO_dh PF01180.21 CTQ28967.1 - 0.12 11.6 0.0 0.88 8.7 0.0 2.0 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase IMPDH PF00478.25 CTQ28967.1 - 0.15 11.0 0.3 0.92 8.4 0.1 1.9 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain PRA-CH PF01502.18 CTQ28968.1 - 4.3e-32 109.8 0.0 6.8e-32 109.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase PRA-PH PF01503.17 CTQ28968.1 - 4.8e-18 65.4 0.3 6.9e-18 64.9 0.3 1.2 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 CTQ28968.1 - 0.028 14.6 0.1 0.047 13.9 0.1 1.4 1 0 0 1 1 1 0 MazG nucleotide pyrophosphohydrolase domain Glycos_transf_2 PF00535.26 CTQ28969.1 - 7.6e-32 110.5 0.1 1.3e-31 109.7 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 CTQ28969.1 - 2.4e-16 60.0 0.6 4.5e-16 59.2 0.6 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 CTQ28969.1 - 1.5e-12 47.9 0.0 2.2e-12 47.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 MPS2 PF17060.5 CTQ28969.1 - 0.00015 21.2 2.8 0.00023 20.5 2.8 1.3 1 0 0 1 1 1 1 Monopolar spindle protein 2 UPF0242 PF06785.11 CTQ28969.1 - 0.00028 21.0 7.1 0.00047 20.3 7.1 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Atg14 PF10186.9 CTQ28969.1 - 0.0044 16.2 7.4 0.0077 15.4 7.4 1.3 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 HAP1_N PF04849.13 CTQ28969.1 - 0.0046 16.2 9.4 0.0072 15.6 9.4 1.2 1 0 0 1 1 1 1 HAP1 N-terminal conserved region KASH_CCD PF14662.6 CTQ28969.1 - 0.0059 16.4 10.1 0.0095 15.8 10.1 1.3 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Spc7 PF08317.11 CTQ28969.1 - 0.01 14.7 7.6 0.018 14.0 7.6 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein APG6_N PF17675.1 CTQ28969.1 - 0.016 15.7 11.5 0.029 14.9 11.5 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Tho2 PF11262.8 CTQ28969.1 - 0.017 14.3 4.7 0.028 13.6 4.7 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Exonuc_VII_L PF02601.15 CTQ28969.1 - 0.02 14.5 4.2 0.031 13.8 4.2 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Dynactin_p22 PF07426.11 CTQ28969.1 - 0.045 13.6 7.1 0.099 12.5 7.1 1.6 1 0 0 1 1 1 0 Dynactin subunit p22 DUF4407 PF14362.6 CTQ28969.1 - 0.048 13.0 4.9 0.079 12.3 4.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Med21 PF11221.8 CTQ28969.1 - 0.06 13.6 5.1 0.13 12.5 5.1 1.5 1 0 0 1 1 1 0 Subunit 21 of Mediator complex OmpH PF03938.14 CTQ28969.1 - 0.065 13.6 10.9 0.11 12.8 10.9 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2721 PF11026.8 CTQ28969.1 - 0.08 12.8 2.6 7 6.5 0.5 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2721) Glyco_tranf_2_4 PF13704.6 CTQ28969.1 - 0.087 13.3 0.4 0.087 13.3 0.4 2.6 3 0 0 3 3 2 0 Glycosyl transferase family 2 TMF_DNA_bd PF12329.8 CTQ28969.1 - 0.1 12.6 11.9 0.19 11.7 11.9 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding HAUS6_N PF14661.6 CTQ28969.1 - 0.2 11.2 5.4 0.32 10.6 5.4 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF848 PF05852.11 CTQ28969.1 - 0.28 11.3 5.1 0.51 10.4 5.1 1.3 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) DUF1515 PF07439.11 CTQ28969.1 - 0.31 11.1 1.4 0.62 10.1 1.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) ADIP PF11559.8 CTQ28969.1 - 0.37 10.9 12.5 0.67 10.0 11.5 1.6 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding CC2-LZ PF16516.5 CTQ28969.1 - 0.39 11.1 10.1 0.084 13.2 2.4 2.4 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator YabA PF06156.13 CTQ28969.1 - 0.43 11.3 4.6 0.82 10.3 4.6 1.5 1 0 0 1 1 1 0 Initiation control protein YabA DUF2968 PF11180.8 CTQ28969.1 - 0.45 10.1 12.2 0.97 9.0 10.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) DUF16 PF01519.16 CTQ28969.1 - 0.73 10.4 8.2 2.4 8.7 8.3 1.9 1 1 0 1 1 1 0 Protein of unknown function DUF16 Seryl_tRNA_N PF02403.22 CTQ28969.1 - 0.81 9.9 8.5 1.5 9.1 8.5 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain FAM76 PF16046.5 CTQ28969.1 - 0.84 8.9 7.3 1.2 8.4 7.3 1.1 1 0 0 1 1 1 0 FAM76 protein SlyX PF04102.12 CTQ28969.1 - 1 10.0 10.7 6.9 7.4 2.8 2.9 1 1 1 2 2 2 0 SlyX GAT PF03127.14 CTQ28969.1 - 1.1 9.7 9.5 0.26 11.6 5.6 2.1 2 0 0 2 2 1 0 GAT domain TMF_TATA_bd PF12325.8 CTQ28969.1 - 1.2 9.4 11.8 2.4 8.4 3.5 2.2 1 1 0 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF641 PF04859.12 CTQ28969.1 - 1.3 9.4 9.8 34 4.8 9.8 2.3 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF3847 PF12958.7 CTQ28969.1 - 1.7 8.8 7.5 3.5 7.8 6.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3847) FapA PF03961.13 CTQ28969.1 - 1.7 7.2 5.7 2.4 6.7 5.7 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A TMPIT PF07851.13 CTQ28969.1 - 1.8 7.7 5.9 3 7.0 5.9 1.3 1 0 0 1 1 1 0 TMPIT-like protein Csm1_N PF18504.1 CTQ28969.1 - 2 8.8 13.7 0.93 9.9 2.6 2.4 1 1 1 2 2 2 0 Csm1 N-terminal domain ZapB PF06005.12 CTQ28969.1 - 2.2 8.8 13.5 8.7 6.9 13.4 2.0 1 1 0 1 1 1 0 Cell division protein ZapB HIP1_clath_bdg PF16515.5 CTQ28969.1 - 3.4 8.3 13.2 7.5 7.2 10.2 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 bZIP_Maf PF03131.17 CTQ28969.1 - 4.1 8.0 10.9 1.3 9.6 6.3 2.3 1 1 1 2 2 2 0 bZIP Maf transcription factor Val_tRNA-synt_C PF10458.9 CTQ28969.1 - 4.8 7.6 10.7 2.2 8.6 3.5 2.3 1 1 1 2 2 2 0 Valyl tRNA synthetase tRNA binding arm ABC_tran_CTD PF16326.5 CTQ28969.1 - 5.9 7.2 11.8 18 5.7 8.9 2.3 1 1 1 2 2 2 0 ABC transporter C-terminal domain MIP-T3_C PF17749.1 CTQ28969.1 - 6.8 6.6 12.8 0.081 12.9 2.1 2.6 3 0 0 3 3 3 0 Microtubule-binding protein MIP-T3 C-terminal region Trimer_CC PF08954.11 CTQ28969.1 - 8.7 6.0 11.1 0.14 11.7 3.2 2.0 2 0 0 2 2 2 0 Trimerisation motif Dzip-like_N PF13815.6 CTQ28969.1 - 9.8 6.2 10.0 2.4 8.2 0.7 2.3 1 1 1 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal Glycos_transf_1 PF00534.20 CTQ28970.1 - 2.9e-26 92.0 0.0 5.3e-26 91.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 CTQ28970.1 - 7.9e-19 68.4 0.0 1.5e-18 67.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 CTQ28970.1 - 8.1e-19 68.0 0.7 1.4e-18 67.3 0.7 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 CTQ28970.1 - 8.9e-09 35.6 0.0 3e-08 33.9 0.0 1.9 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 CTQ28970.1 - 0.00016 21.7 0.0 0.00027 21.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_2 PF00535.26 CTQ28971.1 - 3.6e-17 62.7 0.0 4.9e-17 62.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 CTQ28971.1 - 3.5e-12 46.7 0.0 5.5e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 CTQ28971.1 - 7.8e-07 29.5 0.0 1.6e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 CTQ28971.1 - 0.00086 18.8 0.0 0.0013 18.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Antimicrobial12 PF08107.11 CTQ28971.1 - 0.51 10.1 2.1 0.39 10.5 0.4 1.7 2 0 0 2 2 2 0 Pleurocidin family GLF PF03275.13 CTQ28972.1 - 1.1e-76 257.2 6.3 1.6e-76 256.6 6.3 1.2 1 0 0 1 1 1 1 UDP-galactopyranose mutase NAD_binding_8 PF13450.6 CTQ28972.1 - 2e-17 63.2 0.2 4.7e-17 62.0 0.2 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 CTQ28972.1 - 2.1e-06 27.3 0.0 2.6e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 CTQ28972.1 - 5.9e-06 26.3 0.0 1e-05 25.6 0.0 1.3 1 0 0 1 1 1 1 FAD-NAD(P)-binding DAO PF01266.24 CTQ28972.1 - 1.5e-05 24.8 0.3 3e-05 23.8 0.3 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 CTQ28972.1 - 1.7e-05 25.3 0.1 3.7e-05 24.2 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 CTQ28972.1 - 6.4e-05 22.3 0.1 0.00013 21.3 0.0 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 CTQ28972.1 - 0.00071 18.9 0.0 0.0011 18.3 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain ApbA PF02558.16 CTQ28972.1 - 0.00093 18.9 0.1 0.0019 17.8 0.1 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 CTQ28972.1 - 0.0018 17.9 0.1 0.0032 17.1 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_oxidored PF12831.7 CTQ28972.1 - 0.002 17.5 0.0 0.0027 17.1 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 CTQ28972.1 - 0.0041 16.3 0.1 0.0059 15.7 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain DUF1188 PF06690.11 CTQ28972.1 - 0.0042 16.7 0.0 0.0068 16.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1188) Thi4 PF01946.17 CTQ28972.1 - 0.01 15.1 0.0 0.018 14.3 0.0 1.4 1 0 0 1 1 1 0 Thi4 family 3HCDH_N PF02737.18 CTQ28972.1 - 0.012 15.6 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HI0933_like PF03486.14 CTQ28972.1 - 0.059 12.1 0.2 0.092 11.4 0.2 1.2 1 0 0 1 1 1 0 HI0933-like protein Epimerase PF01370.21 CTQ28972.1 - 0.1 12.1 0.8 0.36 10.3 0.2 1.9 1 1 1 2 2 2 0 NAD dependent epimerase/dehydratase family K_oxygenase PF13434.6 CTQ28972.1 - 0.13 11.4 1.4 0.23 10.5 0.1 2.0 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) F420_oxidored PF03807.17 CTQ28972.1 - 0.14 12.8 0.0 0.32 11.6 0.0 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DUF4422 PF14393.6 CTQ28973.1 - 5e-74 249.0 4.5 1.2e-73 247.8 4.5 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4422) Glyco_transf_8 PF01501.20 CTQ28973.1 - 4.2e-43 147.7 2.4 8.4e-43 146.8 2.4 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 8 Glyco_transf_24 PF18404.1 CTQ28973.1 - 9.2e-06 25.3 0.1 2.5e-05 23.8 0.0 1.7 2 0 0 2 2 2 1 Glucosyltransferase 24 HlyE PF06109.13 CTQ28973.1 - 0.00077 18.9 3.2 0.035 13.4 0.6 2.2 2 0 0 2 2 2 2 Haemolysin E (HlyE) ABC_tran PF00005.27 CTQ28974.1 - 5.2e-17 62.6 0.1 2.5e-16 60.5 0.1 1.9 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ28974.1 - 0.00012 22.1 1.6 0.098 12.4 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ28974.1 - 0.0088 15.8 0.2 0.016 14.9 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain NTPase_1 PF03266.15 CTQ28974.1 - 0.025 14.5 4.3 0.87 9.5 0.2 2.2 2 0 0 2 2 2 0 NTPase AAA_30 PF13604.6 CTQ28974.1 - 0.039 13.7 1.0 0.077 12.7 1.0 1.6 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 CTQ28974.1 - 0.1 11.4 0.0 0.18 10.5 0.0 1.3 1 0 0 1 1 1 0 Predicted ATPase of the ABC class ABC2_membrane PF01061.24 CTQ28975.1 - 4.7e-16 58.8 30.7 4.7e-16 58.8 30.7 1.4 1 1 0 1 1 1 1 ABC-2 type transporter DUF3185 PF11381.8 CTQ28975.1 - 5.6 7.1 9.4 8.1 6.5 0.2 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF3185) GDP_Man_Dehyd PF16363.5 CTQ28976.1 - 4.1e-59 200.7 0.0 4.9e-59 200.4 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 CTQ28976.1 - 5.4e-58 196.3 0.1 6.2e-58 196.1 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 CTQ28976.1 - 1.4e-21 76.8 0.0 1.9e-21 76.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 CTQ28976.1 - 4.4e-17 62.1 0.0 5.2e-17 61.9 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 CTQ28976.1 - 2.3e-13 50.0 0.0 2.7e-12 46.4 0.0 2.1 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 CTQ28976.1 - 2.8e-09 36.5 0.0 1e-05 24.9 0.0 2.3 2 0 0 2 2 2 2 Male sterility protein adh_short PF00106.25 CTQ28976.1 - 7.5e-09 35.3 0.0 5.3e-08 32.5 0.0 2.0 2 0 0 2 2 2 1 short chain dehydrogenase NAD_binding_10 PF13460.6 CTQ28976.1 - 1.2e-06 28.5 0.0 3.2e-06 27.2 0.0 1.7 2 1 0 2 2 2 1 NAD(P)H-binding KR PF08659.10 CTQ28976.1 - 0.00016 21.6 0.0 0.00042 20.3 0.0 1.6 1 1 0 1 1 1 1 KR domain adh_short_C2 PF13561.6 CTQ28976.1 - 0.00063 19.4 0.1 0.0011 18.5 0.0 1.5 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase 3HCDH_N PF02737.18 CTQ28976.1 - 0.17 11.7 0.0 0.39 10.6 0.0 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 CTQ28977.1 - 3.2e-34 118.1 0.2 5.3e-34 117.4 0.2 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 CTQ28977.1 - 1.6e-26 92.3 0.0 3.2e-26 91.4 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 CTQ28977.1 - 2.5e-09 37.5 1.1 6.6e-07 29.7 0.1 2.6 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 3HCDH_N PF02737.18 CTQ28977.1 - 0.00021 21.3 0.2 0.00062 19.7 0.0 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ldh_1_N PF00056.23 CTQ28977.1 - 0.0037 17.3 0.9 0.0093 16.1 0.9 1.7 1 1 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Glyco_hydro_4 PF02056.16 CTQ28977.1 - 0.0044 16.6 0.7 0.051 13.1 0.1 2.5 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase ZnuA PF01297.17 CTQ28977.1 - 0.0081 15.6 0.4 2.3 7.5 0.0 2.9 3 1 0 3 3 3 1 Zinc-uptake complex component A periplasmic ApbA PF02558.16 CTQ28977.1 - 0.016 14.8 0.0 0.031 13.9 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 CTQ28977.1 - 0.019 14.9 0.1 0.036 14.0 0.1 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Methyltransf_16 PF10294.9 CTQ28977.1 - 0.025 14.3 0.3 0.054 13.2 0.1 1.6 2 0 0 2 2 2 0 Lysine methyltransferase 2-Hacid_dh_C PF02826.19 CTQ28977.1 - 0.033 13.6 0.4 0.64 9.4 0.0 2.4 2 1 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF2204 PF09970.9 CTQ28977.1 - 0.035 13.7 0.1 0.072 12.7 0.1 1.5 1 0 0 1 1 1 0 Nucleotidyl transferase of unknown function (DUF2204) F420_oxidored PF03807.17 CTQ28977.1 - 0.04 14.5 0.2 1.1 9.9 0.0 3.1 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent CoA_binding_2 PF13380.6 CTQ28977.1 - 0.099 13.1 0.1 2.8 8.5 0.0 2.7 3 1 0 3 3 2 0 CoA binding domain PGM_PMM_I PF02878.16 CTQ28978.1 - 5.4e-34 116.9 0.0 1.4e-33 115.5 0.0 1.6 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 CTQ28978.1 - 1.6e-23 83.1 0.0 2.5e-23 82.4 0.0 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 CTQ28978.1 - 3.8e-23 82.0 0.2 8.2e-23 81.0 0.2 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 CTQ28978.1 - 7.7e-11 42.0 0.1 2e-10 40.7 0.1 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain NTP_transferase PF00483.23 CTQ28979.1 - 2.3e-76 256.7 0.0 1e-75 254.5 0.0 1.9 2 0 0 2 2 2 1 Nucleotidyl transferase MannoseP_isomer PF01050.18 CTQ28979.1 - 2.2e-64 215.9 0.2 4.5e-64 214.9 0.2 1.5 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_2 PF07883.11 CTQ28979.1 - 3.9e-12 45.7 0.2 8.1e-12 44.7 0.2 1.6 1 0 0 1 1 1 1 Cupin domain NTP_transf_3 PF12804.7 CTQ28979.1 - 2.1e-09 37.9 0.0 5.2e-09 36.7 0.0 1.8 1 1 0 1 1 1 1 MobA-like NTP transferase domain AraC_binding PF02311.19 CTQ28979.1 - 5.4e-05 23.1 0.1 0.00014 21.7 0.1 1.7 1 0 0 1 1 1 1 AraC-like ligand binding domain DUF1088 PF06469.11 CTQ28979.1 - 0.02 14.6 0.0 0.035 13.8 0.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1088) CENP-C_C PF11699.8 CTQ28979.1 - 0.039 14.2 0.0 0.072 13.3 0.0 1.4 1 0 0 1 1 1 0 Mif2/CENP-C like Maf PF02545.14 CTQ28979.1 - 0.064 13.1 0.1 8.7 6.2 0.1 2.4 1 1 1 2 2 2 0 Maf-like protein 6PGD PF00393.19 CTQ28980.1 - 1.1e-133 445.0 0.1 1.7e-133 444.5 0.1 1.3 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 CTQ28980.1 - 6.9e-52 175.8 0.0 1.5e-51 174.7 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 CTQ28980.1 - 0.00054 19.6 0.0 0.0011 18.7 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Shikimate_DH PF01488.20 CTQ28980.1 - 0.0012 19.0 0.1 0.0029 17.7 0.0 1.6 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 CTQ28980.1 - 0.0015 19.1 0.0 0.005 17.4 0.0 2.0 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 CTQ28980.1 - 0.011 15.6 0.0 0.019 14.8 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 CTQ28980.1 - 0.029 13.7 0.0 0.051 12.9 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 CTQ28980.1 - 0.071 13.1 0.0 0.17 11.8 0.0 1.7 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IlvN PF07991.12 CTQ28980.1 - 0.12 12.0 0.0 0.76 9.3 0.0 2.2 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Bac_transf PF02397.16 CTQ28981.1 - 1.6e-66 223.4 0.1 1.6e-66 223.4 0.1 1.8 2 0 0 2 2 2 1 Bacterial sugar transferase CoA_binding_3 PF13727.6 CTQ28981.1 - 3.4e-30 105.3 0.1 6e-30 104.5 0.1 1.4 1 0 0 1 1 1 1 CoA-binding domain Ac76 PF05814.11 CTQ28981.1 - 5.3 7.1 8.5 3.7 7.6 1.9 2.7 2 0 0 2 2 2 0 Orf76 (Ac76) Glycos_transf_1 PF00534.20 CTQ28982.1 - 2.6e-26 92.2 0.0 5.4e-26 91.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 CTQ28982.1 - 8.4e-19 68.3 0.0 1.5e-18 67.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 CTQ28982.1 - 2.4e-10 40.7 0.1 3.8e-10 40.0 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Ku PF02735.16 CTQ28982.1 - 0.024 14.4 0.0 0.041 13.6 0.0 1.4 1 0 0 1 1 1 0 Ku70/Ku80 beta-barrel domain Glyco_trans_4_4 PF13579.6 CTQ28982.1 - 0.086 13.3 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain Polysacc_synt_3 PF13440.6 CTQ28983.1 - 2e-53 181.5 16.6 2e-53 181.5 16.6 2.3 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 CTQ28983.1 - 8.8e-18 64.6 25.0 8.8e-18 64.6 25.0 3.0 1 1 1 3 3 3 2 Polysaccharide biosynthesis protein PS_pyruv_trans PF04230.13 CTQ28985.1 - 1.9e-07 31.3 1.0 1e-06 28.9 0.1 2.5 3 1 0 3 3 3 1 Polysaccharide pyruvyl transferase Glycos_transf_1 PF00534.20 CTQ28986.1 - 2.2e-15 56.6 0.1 5.7e-15 55.3 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 CTQ28986.1 - 4.6e-14 53.0 0.0 8.9e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 CTQ28986.1 - 1.4e-05 25.2 0.0 6.4e-05 23.0 0.0 2.0 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 CTQ28987.1 - 3.4e-31 108.1 0.1 5.5e-31 107.4 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 CTQ28987.1 - 1.1e-27 97.1 0.0 2.4e-27 96.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 CTQ28987.1 - 5.7e-05 23.4 0.0 0.00011 22.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Mei4 PF13971.6 CTQ28987.1 - 0.015 14.8 0.3 0.029 13.9 0.0 1.5 2 0 0 2 2 2 0 Meiosis-specific protein Mei4 EpsG PF14897.6 CTQ28988.1 - 4.1e-20 72.3 55.4 4.1e-20 72.3 55.4 1.9 2 0 0 2 2 2 1 EpsG family Cellulase PF00150.18 CTQ28991.1 - 8.9e-09 35.2 1.1 1.3e-08 34.6 1.1 1.2 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Glyco_hydro_cc PF11790.8 CTQ28991.1 - 7.2e-08 32.3 0.0 1.1e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase catalytic core Glyco_hydro_53 PF07745.13 CTQ28991.1 - 0.0018 17.4 0.4 0.0024 16.9 0.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 53 Glycos_transf_2 PF00535.26 CTQ28992.1 - 2.7e-21 76.1 0.4 4.6e-21 75.4 0.4 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 CTQ28992.1 - 5.4e-09 35.9 0.3 9e-09 35.2 0.3 1.5 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_1 PF00534.20 CTQ28993.1 - 2e-23 82.8 0.0 3.3e-23 82.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 CTQ28993.1 - 7.5e-16 58.8 0.0 1.2e-15 58.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 CTQ28993.1 - 1.3e-08 35.0 0.0 1.7e-07 31.4 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 CTQ28993.1 - 0.00086 19.7 0.0 0.0016 18.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 GNVR PF13807.6 CTQ28995.1 - 2e-34 117.4 1.0 6.2e-34 115.8 1.0 1.9 1 0 0 1 1 1 1 G-rich domain on putative tyrosine kinase Wzz PF02706.15 CTQ28995.1 - 1.8e-24 85.9 0.1 1.8e-24 85.9 0.1 2.3 2 0 0 2 2 2 1 Chain length determinant protein AAA_31 PF13614.6 CTQ28995.1 - 7.7e-09 35.7 1.7 6.7e-08 32.6 0.1 3.0 2 1 0 2 2 2 1 AAA domain CbiA PF01656.23 CTQ28995.1 - 1.6e-05 24.9 0.0 5.7e-05 23.2 0.0 2.0 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 CTQ28995.1 - 0.00011 22.1 0.4 0.63 9.8 0.1 2.7 2 0 0 2 2 2 2 AAA domain ParA PF10609.9 CTQ28995.1 - 0.00037 20.0 0.6 0.0013 18.2 0.6 2.0 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_25 PF13481.6 CTQ28995.1 - 0.00073 19.2 0.0 0.0019 17.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 CTQ28995.1 - 0.0056 16.0 3.1 0.026 13.9 0.0 2.3 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain MipZ PF09140.11 CTQ28995.1 - 0.0083 15.4 0.0 0.022 14.1 0.0 1.6 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 CTQ28995.1 - 0.023 13.9 3.7 12 4.9 0.0 3.9 4 0 0 4 4 4 0 Anion-transporting ATPase LMBR1 PF04791.16 CTQ28995.1 - 0.035 13.0 0.3 0.058 12.3 0.3 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein Zeta_toxin PF06414.12 CTQ28995.1 - 0.04 13.2 0.2 0.19 11.0 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin Fer4_NifH PF00142.18 CTQ28995.1 - 0.051 13.0 0.0 0.14 11.6 0.0 1.7 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family IstB_IS21 PF01695.17 CTQ28995.1 - 0.06 13.1 0.2 0.17 11.6 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SSM PF04612.12 CTQ28995.1 - 1.1 9.3 4.7 0.29 11.2 0.6 2.1 2 1 1 3 3 3 0 Type II secretion system (T2SS), protein M Tup_N PF08581.10 CTQ28995.1 - 2.1 8.7 7.9 0.39 11.0 2.7 2.4 2 0 0 2 2 2 0 Tup N-terminal LMWPc PF01451.21 CTQ28996.1 - 5.4e-39 133.8 0.0 6e-39 133.7 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase Poly_export PF02563.16 CTQ28997.1 - 4.1e-29 100.6 0.2 2.1e-28 98.4 0.1 2.2 3 0 0 3 3 3 1 Polysaccharide biosynthesis/export protein Wza_C PF18412.1 CTQ28997.1 - 1.3e-17 63.2 0.3 2.6e-17 62.2 0.3 1.5 1 0 0 1 1 1 1 Outer-membrane lipoprotein Wza C-terminal domain SLBB PF10531.9 CTQ28997.1 - 2.8e-14 52.7 0.2 1.5e-07 31.2 0.0 2.7 2 0 0 2 2 2 2 SLBB domain Caps_assemb_Wzi PF14052.6 CTQ28998.1 - 1.4e-106 356.9 19.7 1.8e-106 356.6 19.7 1.1 1 0 0 1 1 1 1 Capsule assembly protein Wzi PAP2 PF01569.21 CTQ28999.1 - 1.5e-10 41.0 9.0 1.5e-10 41.0 9.0 2.1 1 1 1 2 2 2 1 PAP2 superfamily NTP_transferase PF00483.23 CTQ29000.1 - 5.1e-21 75.4 0.0 6.3e-21 75.1 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 CTQ29000.1 - 7.5e-07 29.6 0.0 1.5e-06 28.7 0.0 1.5 1 1 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 CTQ29000.1 - 0.02 14.8 0.0 0.06 13.3 0.0 1.7 2 0 0 2 2 2 0 Cytidylyltransferase EFP_N PF08207.12 CTQ29000.1 - 0.23 11.5 0.7 0.55 10.3 0.7 1.6 1 0 0 1 1 1 0 Elongation factor P (EF-P) KOW-like domain TerC PF03741.16 CTQ29002.1 - 4.4e-50 169.9 16.8 6.7e-50 169.3 16.8 1.3 1 0 0 1 1 1 1 Integral membrane protein TerC family CorC_HlyC PF03471.17 CTQ29002.1 - 3.6e-21 75.0 0.2 6.6e-20 70.9 0.0 2.4 1 1 1 2 2 2 1 Transporter associated domain CBS PF00571.28 CTQ29002.1 - 1.5e-14 54.1 0.2 1.2e-07 32.1 0.0 2.7 2 0 0 2 2 2 2 CBS domain AsmA PF05170.14 CTQ29003.1 - 1.1e-35 123.5 7.8 1.2e-19 70.6 6.0 2.1 1 1 1 2 2 2 2 AsmA family AsmA_2 PF13502.6 CTQ29003.1 - 4.3e-25 88.6 17.8 2.2e-20 73.2 7.3 3.9 3 1 1 4 4 4 2 AsmA-like C-terminal region DUF3971 PF13116.6 CTQ29003.1 - 0.0066 16.1 1.6 0.58 9.7 0.0 2.7 3 0 0 3 3 3 2 Protein of unknown function Gyro_capsid PF04162.12 CTQ29003.1 - 0.1 11.1 0.0 0.16 10.4 0.0 1.2 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) AsmA_1 PF13109.6 CTQ29003.1 - 0.17 11.3 0.0 1.8 8.0 0.0 2.2 2 0 0 2 2 2 0 AsmA-like C-terminal region DCD PF06559.11 CTQ29004.1 - 1.5e-10 40.5 0.0 1.1e-07 31.0 0.0 2.0 1 1 1 2 2 2 2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.19 CTQ29004.1 - 4.9e-08 32.7 0.0 6e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 dUTPase PRK PF00485.18 CTQ29005.1 - 1.2e-44 152.4 0.0 1.4e-44 152.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 CTQ29005.1 - 5.6e-05 23.7 0.0 0.0001 22.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain CoaE PF01121.20 CTQ29005.1 - 0.00015 21.5 0.4 0.4 10.3 0.0 2.1 2 0 0 2 2 2 2 Dephospho-CoA kinase APS_kinase PF01583.20 CTQ29005.1 - 0.00098 19.0 0.0 0.16 11.9 0.0 2.3 2 0 0 2 2 2 1 Adenylylsulphate kinase ABC_tran PF00005.27 CTQ29005.1 - 0.0079 16.7 0.0 0.0098 16.4 0.0 1.4 1 1 0 1 1 1 1 ABC transporter dNK PF01712.19 CTQ29005.1 - 0.018 14.9 0.0 0.84 9.4 0.0 2.1 1 1 0 1 1 1 0 Deoxynucleoside kinase AAA_16 PF13191.6 CTQ29005.1 - 0.062 13.7 0.0 0.093 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain KTI12 PF08433.10 CTQ29005.1 - 0.096 12.1 0.1 0.54 9.7 0.0 1.9 2 0 0 2 2 2 0 Chromatin associated protein KTI12 RNA_helicase PF00910.22 CTQ29005.1 - 0.14 12.5 0.0 0.29 11.5 0.0 1.6 1 1 0 1 1 1 0 RNA helicase AAA_17 PF13207.6 CTQ29005.1 - 0.15 12.4 0.1 1.5 9.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain AlkA_N PF06029.11 CTQ29006.1 - 6.3e-30 103.8 0.0 1.3e-29 102.9 0.0 1.5 1 0 0 1 1 1 1 AlkA N-terminal domain HhH-GPD PF00730.25 CTQ29006.1 - 9.8e-10 38.9 0.0 1.7e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 CTQ29006.1 - 0.06 13.2 0.0 0.15 12.0 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_5 PF14520.6 CTQ29006.1 - 0.098 13.3 0.0 22 5.8 0.0 2.6 1 1 1 2 2 2 0 Helix-hairpin-helix domain HSP70 PF00012.20 CTQ29007.1 - 7.6e-20 70.6 0.0 1.2e-12 46.8 0.0 2.9 2 1 0 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 CTQ29007.1 - 4.5e-08 32.3 0.1 1.6e-05 23.9 0.0 2.6 3 0 0 3 3 3 2 MreB/Mbl protein StbA PF06406.11 CTQ29007.1 - 0.0073 15.6 0.0 0.037 13.3 0.0 2.1 2 0 0 2 2 2 1 StbA protein FGGY_C PF02782.16 CTQ29007.1 - 0.014 15.1 0.1 0.14 11.8 0.1 2.2 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain Ppx-GppA PF02541.16 CTQ29007.1 - 0.028 13.9 0.1 0.051 13.0 0.1 1.3 1 0 0 1 1 1 0 Ppx/GppA phosphatase family MutL PF13941.6 CTQ29007.1 - 0.11 11.1 0.0 0.28 9.7 0.0 1.6 2 0 0 2 2 2 0 MutL protein DDR PF08841.10 CTQ29007.1 - 0.16 10.9 0.0 0.28 10.1 0.0 1.3 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain HATPase_c PF02518.26 CTQ29008.1 - 5.9e-21 75.1 0.0 1e-20 74.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 7TMR-DISMED2 PF07696.11 CTQ29008.1 - 1.7e-17 63.7 0.2 3.7e-17 62.6 0.2 1.6 1 0 0 1 1 1 1 7TMR-DISM extracellular 2 HisKA PF00512.25 CTQ29008.1 - 1.6e-09 37.6 0.6 3.1e-09 36.7 0.6 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain 7TMR-DISM_7TM PF07695.11 CTQ29008.1 - 3.1e-06 27.2 29.2 1.1e-05 25.5 29.5 1.8 1 1 0 1 1 1 1 7TM diverse intracellular signalling HATPase_c_5 PF14501.6 CTQ29008.1 - 0.016 15.1 0.0 0.04 13.8 0.0 1.6 1 0 0 1 1 1 0 GHKL domain HATPase_c_2 PF13581.6 CTQ29008.1 - 0.055 13.4 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Response_reg PF00072.24 CTQ29009.1 - 8.3e-19 67.8 0.0 1.3e-18 67.1 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ29009.1 - 1.9e-11 43.9 0.1 4e-11 42.8 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal DUF3653 PF12375.8 CTQ29009.1 - 0.12 12.5 0.0 0.3 11.2 0.0 1.6 1 1 0 1 1 1 0 Phage protein GerE PF00196.19 CTQ29011.1 - 3.3e-05 23.3 0.0 5.6e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family LRV_FeS PF05484.11 CTQ29011.1 - 0.052 13.5 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 LRV protein FeS4 cluster SDF PF00375.18 CTQ29012.1 - 4e-97 325.7 45.6 4.5e-97 325.5 45.6 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family Biotin_lipoyl_2 PF13533.6 CTQ29013.1 - 8.3e-16 57.6 4.7 3.5e-15 55.5 1.9 2.7 2 0 0 2 2 2 1 Biotin-lipoyl like HlyD_3 PF13437.6 CTQ29013.1 - 3.1e-13 50.3 2.3 1.5e-06 28.8 0.4 2.6 2 0 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 CTQ29013.1 - 1.9e-10 40.3 5.4 4.5e-10 39.1 5.4 1.7 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl PF00364.22 CTQ29013.1 - 0.0013 18.5 1.5 0.0086 15.9 0.0 2.9 4 0 0 4 4 4 1 Biotin-requiring enzyme PTS_EIIA_1 PF00358.20 CTQ29013.1 - 0.0024 17.6 0.1 0.019 14.7 0.0 2.4 3 0 0 3 3 3 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Peptidase_M23 PF01551.22 CTQ29013.1 - 0.068 13.4 0.7 2.9 8.2 0.0 2.9 2 1 0 2 2 2 0 Peptidase family M23 BMFP PF04380.13 CTQ29013.1 - 0.074 13.5 1.6 0.16 12.5 1.6 1.6 1 0 0 1 1 1 0 Membrane fusogenic activity VWA_3_C PF18571.1 CTQ29013.1 - 0.082 12.8 0.7 0.25 11.2 0.0 2.2 2 0 0 2 2 2 0 von Willebrand factor type A C-terminal domain PYNP_C PF07831.13 CTQ29013.1 - 0.1 12.3 0.1 4.3 7.1 0.0 2.6 2 0 0 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain ACR_tran PF00873.19 CTQ29014.1 - 0 1212.1 28.5 0 1212.0 28.5 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 CTQ29014.1 - 4e-09 35.8 9.7 4e-09 35.8 9.7 2.8 3 0 0 3 3 3 1 MMPL family SecD_SecF PF02355.16 CTQ29014.1 - 2.7e-07 30.2 27.4 0.00011 21.7 15.4 2.6 2 0 0 2 2 2 2 Protein export membrane protein PHTB1_C PF14728.6 CTQ29014.1 - 0.055 12.6 0.1 0.19 10.8 0.0 1.8 2 0 0 2 2 2 0 PTHB1 C-terminus Man-6-P_recep PF02157.15 CTQ29014.1 - 0.27 10.3 0.5 0.54 9.3 0.5 1.4 1 0 0 1 1 1 0 Mannose-6-phosphate receptor ACR_tran PF00873.19 CTQ29015.1 - 0 1207.7 12.9 0 1207.5 12.9 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 CTQ29015.1 - 4.1e-10 39.3 17.5 2.1e-06 27.2 5.3 2.5 2 0 0 2 2 2 2 Protein export membrane protein MMPL PF03176.15 CTQ29015.1 - 2.1e-09 36.8 27.5 2.4e-07 30.0 8.2 3.2 4 0 0 4 4 4 2 MMPL family Patched PF02460.18 CTQ29015.1 - 0.031 12.3 10.4 0.052 11.6 10.4 1.2 1 0 0 1 1 1 0 Patched family MFS_1 PF07690.16 CTQ29016.1 - 6.3e-46 156.9 50.6 6.3e-46 156.9 50.6 2.6 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 CTQ29016.1 - 1.1e-08 33.9 28.2 1.4e-08 33.6 14.3 2.2 2 0 0 2 2 2 2 Transmembrane secretion effector Sugar_tr PF00083.24 CTQ29016.1 - 2.2e-06 26.8 10.5 2.2e-06 26.8 10.5 3.2 2 2 1 3 3 3 2 Sugar (and other) transporter HATPase_c PF02518.26 CTQ29017.1 - 5.2e-19 68.8 0.0 1e-18 67.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 CTQ29017.1 - 4.5e-16 59.0 2.7 1.8e-15 57.0 0.2 2.9 3 0 0 3 3 3 1 HAMP domain HisKA PF00512.25 CTQ29017.1 - 7.7e-12 45.1 3.1 8.2e-12 45.0 0.3 2.6 4 0 0 4 4 4 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 CTQ29017.1 - 0.011 15.7 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 GHKL domain Baculo_PEP_C PF04513.12 CTQ29017.1 - 0.11 12.5 0.1 0.27 11.3 0.1 1.6 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus betaPIX_CC PF16523.5 CTQ29017.1 - 0.12 12.2 0.1 0.27 11.1 0.1 1.5 1 0 0 1 1 1 0 betaPIX coiled coil Response_reg PF00072.24 CTQ29018.1 - 1.1e-24 86.8 0.0 1.6e-24 86.2 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ29018.1 - 8.9e-24 83.4 0.1 1.6e-23 82.5 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Elongin_A PF06881.11 CTQ29018.1 - 0.047 14.2 0.1 0.079 13.5 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase II transcription factor SIII (Elongin) subunit A HTH_11 PF08279.12 CTQ29018.1 - 0.13 12.3 0.2 0.41 10.6 0.2 2.0 1 1 0 1 1 1 0 HTH domain Peptidase_U32 PF01136.19 CTQ29019.1 - 4.8e-97 323.7 0.0 6.4e-97 323.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase family U32 Peptidase_U32_C PF16325.5 CTQ29019.1 - 1.2e-20 73.5 0.0 3.3e-20 72.1 0.0 1.8 2 0 0 2 2 2 1 Peptidase family U32 C-terminal domain Nup35_RRM_2 PF14605.6 CTQ29019.1 - 0.025 14.6 0.0 2.8 8.0 0.0 3.1 3 1 0 3 3 3 0 Nup53/35/40-type RNA recognition motif Tachystatin_B PF11478.8 CTQ29019.1 - 0.35 10.9 4.1 0.14 12.1 0.6 2.0 2 0 0 2 2 2 0 Antimicrobial chitin binding protein tachystatin B DAGK_cat PF00781.24 CTQ29020.1 - 2.1e-27 95.3 0.4 3e-27 94.7 0.4 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NAD_kinase PF01513.21 CTQ29020.1 - 0.06 12.5 0.1 0.076 12.2 0.1 1.2 1 0 0 1 1 1 0 ATP-NAD kinase HAD_2 PF13419.6 CTQ29021.1 - 3.4e-31 108.7 0.0 4.4e-31 108.3 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ29021.1 - 3.8e-20 73.1 0.0 1.2e-19 71.5 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ29021.1 - 8.9e-07 28.9 0.0 1.5e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 CTQ29021.1 - 5.8e-06 26.8 0.5 1.3e-05 25.7 0.2 1.7 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 CTQ29021.1 - 1.6e-05 24.9 0.1 0.00069 19.7 0.1 2.6 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase NIF PF03031.18 CTQ29021.1 - 0.0016 18.3 0.0 0.004 16.9 0.0 1.8 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase Hydrolase_3 PF08282.12 CTQ29021.1 - 0.014 15.2 0.0 0.32 10.7 0.0 2.1 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase MFS_1 PF07690.16 CTQ29022.1 - 7e-31 107.4 78.7 1.9e-19 69.8 43.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ29022.1 - 0.0049 15.8 0.6 0.0049 15.8 0.6 3.5 1 1 2 3 3 3 1 MFS_1 like family DUF5325 PF17259.2 CTQ29022.1 - 0.15 12.0 0.2 0.15 12.0 0.2 4.8 6 2 0 6 6 6 0 Family of unknown function (DUF5325) FGGY_N PF00370.21 CTQ29023.1 - 2.6e-75 253.2 0.0 3.4e-75 252.8 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 CTQ29023.1 - 9.8e-38 129.9 0.7 1.7e-37 129.1 0.7 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 CTQ29023.1 - 0.00075 19.1 0.1 0.066 12.7 0.0 2.7 2 1 1 3 3 3 1 BadF/BadG/BcrA/BcrD ATPase family Mannitol_dh_C PF08125.13 CTQ29024.1 - 1.4e-89 299.8 0.0 1.9e-89 299.4 0.0 1.2 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 CTQ29024.1 - 2.3e-44 151.2 0.0 3.8e-44 150.5 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain DUF523 PF04463.12 CTQ29024.1 - 0.095 12.7 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF523) Sugar-bind PF04198.13 CTQ29025.1 - 1.9e-74 250.0 0.0 2.4e-74 249.7 0.0 1.1 1 0 0 1 1 1 1 Putative sugar-binding domain HTH_23 PF13384.6 CTQ29025.1 - 9.2e-06 25.3 0.3 2.6e-05 23.9 0.1 1.9 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 CTQ29025.1 - 0.00014 21.9 0.1 0.0004 20.5 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ29025.1 - 0.00019 21.4 0.0 0.00042 20.2 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_29 PF13551.6 CTQ29025.1 - 0.00059 19.8 0.0 0.0012 18.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn helix HTH_24 PF13412.6 CTQ29025.1 - 0.0034 16.9 0.1 0.0081 15.7 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ29025.1 - 0.0052 16.6 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 MarR family Sigma70_r4_2 PF08281.12 CTQ29025.1 - 0.021 14.5 0.0 0.04 13.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Sigma70_r4 PF04545.16 CTQ29025.1 - 0.043 13.3 0.0 0.098 12.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 GntR PF00392.21 CTQ29025.1 - 0.07 12.8 0.0 0.16 11.6 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_38 PF13936.6 CTQ29025.1 - 0.073 12.8 0.0 0.21 11.4 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 CTQ29025.1 - 0.14 12.0 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain LacI PF00356.21 CTQ29026.1 - 4.8e-16 58.3 0.1 8.8e-16 57.4 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ29026.1 - 2.2e-12 47.1 0.0 3e-12 46.7 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ29026.1 - 1e-09 38.2 0.0 1.6e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family HTH_3 PF01381.22 CTQ29026.1 - 8.9e-06 25.7 0.1 2.3e-05 24.4 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix Peripla_BP_3 PF13377.6 CTQ29026.1 - 7.6e-05 23.1 0.0 0.0035 17.7 0.0 2.4 2 1 0 2 2 2 1 Periplasmic binding protein-like domain IF2_N PF04760.15 CTQ29026.1 - 0.012 15.4 0.0 0.03 14.1 0.0 1.7 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region HTH_19 PF12844.7 CTQ29026.1 - 0.027 14.5 0.1 0.059 13.4 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_26 PF13443.6 CTQ29026.1 - 0.036 14.5 0.1 0.086 13.3 0.1 1.7 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 CTQ29026.1 - 0.087 13.2 0.1 0.4 11.1 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain EZH2_WD-Binding PF11616.8 CTQ29026.1 - 0.17 12.0 0.1 0.34 11.0 0.1 1.5 1 0 0 1 1 1 0 WD repeat binding protein EZH2 HTH_10 PF04967.12 CTQ29026.1 - 0.18 11.6 0.1 0.65 9.8 0.1 2.1 1 1 0 1 1 1 0 HTH DNA binding domain adh_short PF00106.25 CTQ29027.1 - 3.2e-58 196.4 0.0 4.2e-58 196.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ29027.1 - 1.3e-41 142.7 0.1 1.5e-41 142.5 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ29027.1 - 1e-10 41.8 0.2 1.5e-10 41.3 0.2 1.2 1 0 0 1 1 1 1 KR domain 2-Hacid_dh_C PF02826.19 CTQ29027.1 - 0.015 14.6 0.1 0.024 14.0 0.1 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.21 CTQ29027.1 - 0.018 14.5 0.3 0.046 13.2 0.3 1.8 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 CTQ29027.1 - 0.03 13.5 0.0 0.041 13.0 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF1776 PF08643.10 CTQ29027.1 - 0.035 13.5 0.0 0.055 12.8 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Pyr_redox PF00070.27 CTQ29027.1 - 0.036 14.6 0.1 0.073 13.6 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 CTQ29027.1 - 0.04 13.8 0.1 0.063 13.2 0.1 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FGGY_C PF02782.16 CTQ29028.1 - 1.1e-47 162.3 2.4 1.6e-47 161.8 1.7 1.6 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 CTQ29028.1 - 3.4e-31 108.7 0.0 5.4e-31 108.0 0.0 1.3 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain BcrAD_BadFG PF01869.20 CTQ29028.1 - 0.065 12.7 0.1 0.11 11.9 0.0 1.5 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family MFS_1 PF07690.16 CTQ29029.1 - 1.2e-29 103.4 80.1 1.2e-19 70.4 43.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ29029.1 - 0.0014 17.6 17.6 0.43 9.4 0.1 3.6 1 1 2 3 3 3 3 MFS_1 like family DeoC PF01791.9 CTQ29030.1 - 6e-74 248.6 0.1 7.1e-74 248.4 0.1 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase Phos_pyr_kin PF08543.12 CTQ29031.1 - 2.2e-93 312.2 0.0 2.5e-93 312.0 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 CTQ29031.1 - 4e-07 29.6 0.2 4.9e-07 29.4 0.2 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HK PF02110.15 CTQ29032.1 - 3.1e-93 311.7 6.3 4e-93 311.3 6.3 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 CTQ29032.1 - 2.6e-05 23.7 1.6 3.7e-05 23.2 1.6 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 CTQ29032.1 - 0.00023 20.7 2.1 0.00029 20.4 2.1 1.1 1 0 0 1 1 1 1 Carbohydrate kinase TPP_enzyme_C PF02775.21 CTQ29032.1 - 0.08 12.7 3.9 0.33 10.7 0.0 2.7 2 1 1 3 3 3 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Robl_LC7 PF03259.17 CTQ29032.1 - 7.6 6.4 9.1 2.8 7.8 1.0 3.2 3 0 0 3 3 3 0 Roadblock/LC7 domain Usp PF00582.26 CTQ29033.1 - 1.1e-08 35.7 0.2 1.4e-08 35.3 0.2 1.1 1 0 0 1 1 1 1 Universal stress protein family Oxidored_nitro PF00148.19 CTQ29033.1 - 0.026 13.3 0.0 0.037 12.8 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase LysR_substrate PF03466.20 CTQ29034.1 - 6.8e-33 113.8 8.9 9.9e-33 113.3 8.9 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29034.1 - 4.8e-15 55.2 5.6 6e-15 55.0 2.2 2.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family SBP_bac_3 PF00497.20 CTQ29034.1 - 0.024 14.0 0.0 0.036 13.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 DAGK_cat PF00781.24 CTQ29034.1 - 0.14 11.7 0.2 0.35 10.5 0.1 1.7 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain TetM_leader PF08076.11 CTQ29035.1 - 0.094 12.5 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 Tetracycline resistance determinant leader peptide Adenine_deam_C PF13382.6 CTQ29036.1 - 5.7e-42 142.9 0.0 2.5e-41 140.9 0.0 1.9 2 0 0 2 2 2 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 CTQ29036.1 - 9.6e-22 77.8 0.4 1.9e-20 73.5 0.4 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 CTQ29036.1 - 2.7e-08 33.8 0.3 0.00012 21.7 0.1 2.4 2 0 0 2 2 2 2 Amidohydrolase family Alpha_L_fucos PF01120.17 CTQ29036.1 - 0.3 10.5 0.0 0.44 9.9 0.0 1.1 1 0 0 1 1 1 0 Alpha-L-fucosidase Xan_ur_permease PF00860.20 CTQ29037.1 - 3.1e-29 101.8 40.5 4.3e-29 101.4 40.5 1.2 1 0 0 1 1 1 1 Permease family LysR_substrate PF03466.20 CTQ29038.1 - 6.3e-39 133.5 2.8 6.3e-39 133.5 2.8 1.6 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29038.1 - 1.2e-16 60.4 1.6 3.2e-16 59.0 1.6 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family RcnB PF11776.8 CTQ29039.1 - 7.8e-19 67.5 0.1 1.1e-18 67.0 0.1 1.3 1 0 0 1 1 1 1 Nickel/cobalt transporter regulator Acetyltransf_7 PF13508.7 CTQ29040.1 - 4.1e-16 59.2 0.0 5.3e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ29040.1 - 2.3e-15 56.8 0.0 3e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ29040.1 - 7.3e-15 55.0 0.0 9.6e-15 54.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 CTQ29040.1 - 0.085 13.0 0.1 0.14 12.3 0.1 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ29040.1 - 0.2 11.8 0.0 0.43 10.7 0.0 1.6 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase ParA PF10609.9 CTQ29041.1 - 1.1e-100 336.1 0.2 1.4e-100 335.8 0.2 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 CTQ29041.1 - 3e-12 46.7 0.0 7.3e-12 45.5 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 CTQ29041.1 - 3.1e-10 40.3 0.5 1.2e-08 35.1 0.1 2.2 2 0 0 2 2 2 1 AAA domain MipZ PF09140.11 CTQ29041.1 - 4.1e-08 32.8 0.0 8.6e-08 31.8 0.0 1.5 1 1 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.18 CTQ29041.1 - 7.6e-08 32.1 0.0 0.00036 20.1 0.0 2.3 2 1 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family FeS_assembly_P PF01883.19 CTQ29041.1 - 0.00075 19.6 0.0 0.0018 18.4 0.0 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein ArsA_ATPase PF02374.15 CTQ29041.1 - 0.00077 18.7 3.1 0.0019 17.4 0.5 2.4 2 1 1 3 3 3 1 Anion-transporting ATPase VirC1 PF07015.11 CTQ29041.1 - 0.0054 16.0 0.1 0.011 15.0 0.1 1.5 1 0 0 1 1 1 1 VirC1 protein AAA_25 PF13481.6 CTQ29041.1 - 0.025 14.2 0.1 0.051 13.2 0.1 1.5 1 0 0 1 1 1 0 AAA domain CBP_BcsQ PF06564.12 CTQ29041.1 - 0.034 13.6 0.4 0.46 9.9 0.2 2.2 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ MeaB PF03308.16 CTQ29041.1 - 0.074 12.0 0.2 0.11 11.4 0.2 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 CTQ29041.1 - 0.096 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_26 PF13500.6 CTQ29041.1 - 0.16 11.8 2.1 12 5.7 0.1 2.6 2 1 0 2 2 2 0 AAA domain tRNA-synt_1g PF09334.11 CTQ29042.1 - 6.6e-167 555.2 0.1 8.2e-167 554.9 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 CTQ29042.1 - 1.2e-21 76.6 0.0 3e-21 75.3 0.0 1.7 2 0 0 2 2 2 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 CTQ29042.1 - 2.8e-17 62.2 1.0 1.5e-11 43.3 0.1 2.6 3 0 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 CTQ29042.1 - 8.6e-14 51.6 0.6 5.9e-06 25.8 0.0 2.4 2 1 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 CTQ29042.1 - 3.2e-07 29.6 0.0 0.00032 19.7 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) Anticodon_1 PF08264.13 CTQ29042.1 - 0.0028 17.6 0.9 0.0037 17.2 0.1 1.7 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA DUF1456 PF07308.13 CTQ29043.1 - 2.9e-46 155.6 0.1 1.3e-22 79.9 0.0 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF1456) Response_reg PF00072.24 CTQ29044.1 - 4.5e-26 91.2 0.0 1.6e-25 89.4 0.0 1.8 1 1 1 2 2 2 1 Response regulator receiver domain LytTR PF04397.15 CTQ29044.1 - 7.1e-23 80.7 0.0 1.6e-22 79.6 0.0 1.6 1 0 0 1 1 1 1 LytTr DNA-binding domain 5TM-5TMR_LYT PF07694.12 CTQ29045.1 - 1.1e-58 197.5 14.0 1.7e-58 196.9 14.0 1.3 1 0 0 1 1 1 1 5TMR of 5TMR-LYT His_kinase PF06580.13 CTQ29045.1 - 4e-24 84.7 0.9 8.6e-24 83.7 0.9 1.6 1 0 0 1 1 1 1 Histidine kinase GAF_2 PF13185.6 CTQ29045.1 - 1.5e-08 35.1 0.0 4.7e-08 33.4 0.0 1.8 2 0 0 2 2 2 1 GAF domain GAF_3 PF13492.6 CTQ29045.1 - 1.4e-07 31.9 0.0 5.4e-07 30.0 0.0 1.9 2 0 0 2 2 2 1 GAF domain HATPase_c PF02518.26 CTQ29045.1 - 3.7e-05 24.2 0.0 0.004 17.7 0.0 2.5 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SpoVT_C PF15714.5 CTQ29045.1 - 4.3e-05 23.6 0.0 8.4e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Stage V sporulation protein T C-terminal, transcription factor ECF-ribofla_trS PF07155.12 CTQ29045.1 - 0.00086 19.4 7.6 0.002 18.2 7.6 1.6 1 0 0 1 1 1 1 ECF-type riboflavin transporter, S component ECF_trnsprt PF12822.7 CTQ29045.1 - 0.16 12.0 13.1 0.57 10.3 13.1 1.8 1 1 0 1 1 1 0 ECF transporter, substrate-specific component BPD_transp_1 PF00528.22 CTQ29046.1 - 1.2e-21 77.3 17.5 1.2e-21 77.3 17.5 1.7 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Ldr_toxin PF13940.6 CTQ29046.1 - 0.035 14.2 1.4 0.035 14.2 1.4 3.4 5 1 0 5 5 5 0 Toxin Ldr, type I toxin-antitoxin system ABC_tran PF00005.27 CTQ29047.1 - 1.6e-32 112.9 0.0 2.2e-32 112.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ29047.1 - 8.8e-07 29.0 0.1 0.018 14.9 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system CBS PF00571.28 CTQ29047.1 - 1.2e-05 25.7 0.0 5.6e-05 23.5 0.0 2.2 2 0 0 2 2 2 1 CBS domain AAA_16 PF13191.6 CTQ29047.1 - 4.6e-05 23.9 0.6 0.00019 21.9 0.3 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 CTQ29047.1 - 0.00024 20.8 0.0 0.00045 19.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ29047.1 - 0.00041 20.2 0.0 0.00056 19.7 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 CTQ29047.1 - 0.0006 19.6 0.0 0.0013 18.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 CTQ29047.1 - 0.0012 18.2 0.0 0.0019 17.5 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 CTQ29047.1 - 0.0034 17.7 0.1 0.014 15.7 0.0 2.0 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 CTQ29047.1 - 0.0049 16.8 0.0 0.0085 16.0 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase G-alpha PF00503.20 CTQ29047.1 - 0.012 14.8 0.0 0.015 14.5 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit SMC_N PF02463.19 CTQ29047.1 - 0.027 13.9 0.0 1.7 8.0 0.1 2.1 1 1 1 2 2 2 0 RecF/RecN/SMC N terminal domain FtsK_SpoIIIE PF01580.18 CTQ29047.1 - 0.074 12.4 0.1 0.13 11.6 0.1 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_25 PF13481.6 CTQ29047.1 - 0.18 11.4 0.8 0.34 10.4 0.1 1.8 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 CTQ29048.1 - 1.7e-20 73.5 18.1 1.7e-20 73.5 18.1 2.7 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Patched PF02460.18 CTQ29048.1 - 2.3 6.2 2.9 3.2 5.7 2.9 1.1 1 0 0 1 1 1 0 Patched family OpuAC PF04069.12 CTQ29049.1 - 2.7e-61 207.4 4.1 3.2e-61 207.2 4.1 1.1 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Glyco_hydro_3 PF00933.21 CTQ29050.1 - 6.6e-99 331.3 0.0 9.2e-99 330.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Glyco_hydro_3_C PF01915.22 CTQ29050.1 - 2.4e-62 210.5 0.3 7.1e-62 209.0 0.2 1.8 2 0 0 2 2 2 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 CTQ29050.1 - 3.9e-23 81.3 0.1 7.8e-23 80.4 0.1 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain CARDB PF07705.11 CTQ29050.1 - 0.035 14.4 0.0 0.082 13.2 0.0 1.6 1 0 0 1 1 1 0 CARDB Ig_GlcNase PF18368.1 CTQ29050.1 - 0.13 12.4 0.1 0.33 11.1 0.1 1.6 1 0 0 1 1 1 0 Exo-beta-D-glucosaminidase Ig-fold domain Lact-deh-memb PF09330.11 CTQ29051.1 - 5.9e-149 495.2 2.3 7.8e-149 494.8 2.3 1.2 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding FAD_binding_4 PF01565.23 CTQ29051.1 - 9e-09 35.2 0.0 1.5e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Acetyltransf_4 PF13420.7 CTQ29052.1 - 1.2e-17 64.5 0.0 1.4e-17 64.3 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ29052.1 - 1.3e-08 35.1 0.1 1.7e-08 34.7 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 CTQ29052.1 - 1.7e-06 28.8 0.0 2e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ29052.1 - 0.0001 22.7 0.0 0.00016 22.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ29052.1 - 0.00017 21.5 0.0 0.00026 20.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF1194 PF06707.11 CTQ29052.1 - 0.18 11.0 0.0 0.51 9.5 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1194) Peptidase_S11 PF00768.20 CTQ29053.1 - 2.5e-83 279.2 0.4 3.2e-83 278.9 0.4 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 CTQ29053.1 - 2.8e-10 40.2 0.3 4.5e-10 39.5 0.3 1.3 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 CTQ29053.1 - 0.0024 17.2 1.6 0.29 10.3 0.1 2.2 2 0 0 2 2 2 2 Beta-lactamase Peptidase_S13 PF02113.15 CTQ29053.1 - 0.004 15.9 1.8 0.51 9.0 0.4 2.1 2 0 0 2 2 2 2 D-Ala-D-Ala carboxypeptidase 3 (S13) family DUF1282 PF06930.12 CTQ29054.1 - 1.2e-35 122.9 10.7 1.4e-35 122.6 10.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1282) Yip1 PF04893.17 CTQ29054.1 - 6.7e-28 97.5 14.3 6.7e-28 97.5 14.3 1.5 1 1 0 1 1 1 1 Yip1 domain DUF697 PF05128.12 CTQ29054.1 - 0.38 10.4 5.2 0.58 9.9 4.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF697) Vpu PF00558.19 CTQ29054.1 - 0.59 9.9 3.1 0.71 9.7 0.6 2.2 2 0 0 2 2 2 0 Vpu protein SNARE_assoc PF09335.11 CTQ29055.1 - 3.9e-19 69.3 5.6 3.9e-19 69.3 5.6 1.5 2 0 0 2 2 2 1 SNARE associated Golgi protein DUF4051 PF13260.6 CTQ29055.1 - 0.13 12.1 5.2 0.35 10.6 5.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) RseC_MucC PF04246.12 CTQ29055.1 - 0.7 9.9 3.4 2.1 8.3 0.1 2.3 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF2650 PF10853.8 CTQ29055.1 - 1.4 8.7 3.6 3 7.6 3.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) OEP PF02321.18 CTQ29056.1 - 5.2e-33 114.4 24.2 2.3e-18 66.7 9.7 2.1 2 0 0 2 2 2 2 Outer membrane efflux protein Autoind_bind PF03472.15 CTQ29056.1 - 0.033 13.7 0.0 0.082 12.4 0.0 1.7 1 0 0 1 1 1 0 Autoinducer binding domain Glyco_hydro_1 PF00232.18 CTQ29058.1 - 8e-154 512.4 0.0 9e-154 512.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Cellulase PF00150.18 CTQ29058.1 - 0.00013 21.5 0.0 0.00026 20.5 0.0 1.4 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) PTS_EIIA_1 PF00358.20 CTQ29059.1 - 1.7e-49 166.8 0.0 3.3e-49 165.8 0.0 1.5 1 0 0 1 1 1 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PTS_EIIC PF02378.18 CTQ29059.1 - 6.7e-23 81.2 29.7 6.7e-23 81.2 29.7 1.9 1 1 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ29059.1 - 7.1e-15 54.2 0.3 1.2e-14 53.5 0.3 1.4 1 0 0 1 1 1 1 phosphotransferase system, EIIB Biotin_lipoyl_2 PF13533.6 CTQ29059.1 - 2e-05 24.3 0.0 0.00017 21.3 0.1 2.4 3 0 0 3 3 3 1 Biotin-lipoyl like PRD PF00874.20 CTQ29060.1 - 1.3e-43 147.2 2.5 3.3e-21 75.4 0.0 2.2 2 0 0 2 2 2 2 PRD domain CAT_RBD PF03123.15 CTQ29060.1 - 2.3e-23 81.9 0.1 4.2e-23 81.0 0.1 1.4 1 0 0 1 1 1 1 CAT RNA binding domain Pepdidase_M14_N PF18027.1 CTQ29060.1 - 0.078 13.3 0.4 0.13 12.6 0.4 1.3 1 0 0 1 1 1 0 Cytosolic carboxypeptidase N-terminal domain OprB PF04966.12 CTQ29061.1 - 1e-58 199.6 5.4 1.2e-58 199.4 5.4 1.0 1 0 0 1 1 1 1 Carbohydrate-selective porin, OprB family Dus PF01207.17 CTQ29062.1 - 1.2e-89 300.5 0.0 1.4e-89 300.2 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 CTQ29062.1 - 0.023 14.2 0.0 0.039 13.4 0.0 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein ATP-synt_D PF01813.17 CTQ29062.1 - 0.073 12.9 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 ATP synthase subunit D LrgA PF03788.14 CTQ29063.1 - 1e-29 102.3 10.3 1.3e-29 102.0 10.3 1.1 1 0 0 1 1 1 1 LrgA family LrgB PF04172.16 CTQ29063.1 - 0.019 14.5 5.0 0.024 14.1 5.0 1.2 1 0 0 1 1 1 0 LrgB-like family MarC PF01914.17 CTQ29063.1 - 6.3 6.1 11.8 1.7 8.0 3.6 2.7 2 1 1 3 3 3 0 MarC family integral membrane protein LrgB PF04172.16 CTQ29064.1 - 1.5e-79 266.4 16.9 1.7e-79 266.3 16.9 1.0 1 0 0 1 1 1 1 LrgB-like family DUF677 PF05055.12 CTQ29064.1 - 0.15 10.9 1.0 0.21 10.5 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF677) DUF2070 PF09843.9 CTQ29064.1 - 2.2 6.5 14.0 6.8 4.9 14.0 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) dCMP_cyt_deam_2 PF08211.12 CTQ29065.1 - 3.1e-43 147.2 0.9 1.2e-42 145.3 0.1 2.1 2 1 0 2 2 2 1 Cytidine and deoxycytidylate deaminase zinc-binding region dCMP_cyt_deam_1 PF00383.23 CTQ29065.1 - 7e-13 48.3 0.0 8.2e-11 41.7 0.0 2.2 2 0 0 2 2 2 2 Cytidine and deoxycytidylate deaminase zinc-binding region DUF5447 PF17525.2 CTQ29065.1 - 0.19 12.2 0.0 0.34 11.4 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5447) MafB19-deam PF14437.6 CTQ29065.1 - 0.2 11.4 0.0 0.38 10.5 0.0 1.5 1 1 0 1 1 1 0 MafB19-like deaminase Pput2613-deam PF14427.6 CTQ29065.1 - 0.21 11.5 0.0 0.34 10.8 0.0 1.3 1 0 0 1 1 1 0 Pput_2613-like deaminase DUF218 PF02698.17 CTQ29067.1 - 2.7e-17 63.0 0.0 3.6e-17 62.6 0.0 1.1 1 0 0 1 1 1 1 DUF218 domain Peptidase_M64 PF09471.10 CTQ29067.1 - 0.17 11.4 0.0 5.7 6.4 0.1 2.1 2 0 0 2 2 2 0 IgA Peptidase M64 BPD_transp_2 PF02653.16 CTQ29068.1 - 7.9e-49 166.2 39.9 7.9e-49 166.2 39.9 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 CTQ29069.1 - 6.3e-49 166.0 0.3 1.6e-28 99.9 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ29069.1 - 7.1e-10 39.2 0.0 0.00068 19.5 0.0 3.3 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 CTQ29069.1 - 0.00097 19.7 0.2 0.0043 17.6 0.0 2.0 2 1 0 2 2 2 1 AAA domain DUF2813 PF11398.8 CTQ29069.1 - 0.0011 18.4 0.0 0.0016 17.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) AAA_29 PF13555.6 CTQ29069.1 - 0.0011 18.6 0.0 0.0028 17.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 CTQ29069.1 - 0.0017 17.8 2.8 0.013 14.9 0.7 2.8 2 2 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ29069.1 - 0.0025 18.2 0.0 0.0056 17.1 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_27 PF13514.6 CTQ29069.1 - 0.0047 16.5 0.0 0.0089 15.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ29069.1 - 0.0054 16.7 0.1 0.025 14.5 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_15 PF13175.6 CTQ29069.1 - 0.026 14.3 0.3 0.079 12.7 0.1 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.6 CTQ29069.1 - 0.06 13.6 0.1 0.19 12.0 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 CTQ29069.1 - 0.065 11.9 0.1 4.7 5.7 0.0 2.4 3 0 0 3 3 3 0 AAA domain AAA_30 PF13604.6 CTQ29069.1 - 0.12 12.1 0.0 0.46 10.2 0.0 2.0 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 CTQ29069.1 - 0.18 12.1 0.1 82 3.5 0.0 3.2 3 0 0 3 3 3 0 Putative exonuclease SbcCD, C subunit Peripla_BP_4 PF13407.6 CTQ29070.1 - 1.1e-64 218.5 12.6 1.4e-64 218.2 12.6 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ29070.1 - 6.4e-10 38.9 1.7 4e-09 36.3 1.7 1.9 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ29070.1 - 3.5e-07 30.7 0.1 6.8e-07 29.8 0.1 1.4 1 0 0 1 1 1 1 Periplasmic binding protein-like domain PucR PF07905.11 CTQ29070.1 - 0.022 15.0 0.2 0.098 12.9 0.0 2.0 2 0 0 2 2 2 0 Purine catabolism regulatory protein-like family Peripla_BP_3 PF13377.6 CTQ29071.1 - 1e-32 113.8 0.1 6.3e-32 111.2 0.0 2.0 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ29071.1 - 9.1e-22 77.8 0.0 1.5e-21 77.0 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 CTQ29071.1 - 1.6e-20 72.6 0.9 3.9e-20 71.4 0.9 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ29071.1 - 1e-17 64.6 0.0 1.6e-17 64.0 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_3 PF01381.22 CTQ29071.1 - 0.0016 18.4 0.0 0.0033 17.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_Tnp_ISL3 PF13542.6 CTQ29071.1 - 0.0019 17.5 0.5 0.0053 16.1 0.5 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_31 PF13560.6 CTQ29071.1 - 0.0027 18.0 0.1 0.0081 16.5 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma54_DBD PF04552.13 CTQ29071.1 - 0.0089 15.8 0.9 0.31 10.7 0.2 2.2 1 1 1 2 2 2 1 Sigma-54, DNA binding domain HTH_38 PF13936.6 CTQ29071.1 - 0.01 15.5 2.6 0.086 12.6 0.1 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_7 PF02796.15 CTQ29071.1 - 0.013 15.5 0.1 0.028 14.5 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Trp_repressor PF01371.19 CTQ29071.1 - 0.019 15.1 0.0 0.044 13.9 0.0 1.6 1 0 0 1 1 1 0 Trp repressor protein HTH_23 PF13384.6 CTQ29071.1 - 0.027 14.3 0.1 0.081 12.7 0.1 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_IclR PF09339.10 CTQ29071.1 - 0.038 13.8 0.0 0.23 11.3 0.0 2.3 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_24 PF13412.6 CTQ29071.1 - 0.055 13.0 1.0 0.14 11.8 0.1 2.2 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 CTQ29071.1 - 0.1 13.1 0.0 0.2 12.1 0.0 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain TetR_N PF00440.23 CTQ29071.1 - 0.11 12.3 0.2 0.27 11.1 0.2 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family DUF418 PF04235.12 CTQ29072.1 - 1e-45 155.6 17.6 1e-45 155.6 17.6 2.8 2 1 1 3 3 3 1 Protein of unknown function (DUF418) GTP_cyclohydroI PF01227.22 CTQ29073.1 - 1e-62 210.8 0.4 1.2e-62 210.5 0.4 1.1 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.6 CTQ29073.1 - 0.05 13.8 0.0 0.095 12.9 0.0 1.4 1 0 0 1 1 1 0 QueF-like protein Esterase PF00756.20 CTQ29074.1 - 1.3e-69 234.7 0.0 1.5e-69 234.5 0.0 1.0 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 CTQ29074.1 - 1.3e-06 28.0 0.0 2e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 CTQ29074.1 - 6.8e-06 25.5 0.2 0.00058 19.2 0.1 2.1 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Esterase_phd PF10503.9 CTQ29074.1 - 0.00028 20.4 0.2 0.31 10.5 0.0 2.4 2 1 0 2 2 2 2 Esterase PHB depolymerase Abhydrolase_6 PF12697.7 CTQ29074.1 - 0.0045 17.6 3.7 0.0045 17.6 3.7 1.6 1 1 0 2 2 2 1 Alpha/beta hydrolase family Chlorophyllase2 PF12740.7 CTQ29074.1 - 0.013 14.4 0.0 0.019 13.9 0.0 1.4 1 1 0 1 1 1 0 Chlorophyllase enzyme Lipase_3 PF01764.25 CTQ29074.1 - 0.03 14.2 0.0 0.04 13.8 0.0 1.2 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_1 PF00561.20 CTQ29074.1 - 0.04 13.6 0.1 0.1 12.2 0.1 1.7 1 1 1 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 CTQ29074.1 - 0.053 13.4 0.5 0.62 9.9 0.5 2.2 1 1 0 1 1 1 0 alpha/beta hydrolase fold Chlorophyllase PF07224.11 CTQ29074.1 - 0.093 11.7 0.0 0.14 11.2 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase TonB_dep_Rec PF00593.24 CTQ29075.1 - 6.4e-63 214.3 26.0 8e-63 213.9 26.0 1.3 1 0 0 1 1 1 1 TonB dependent receptor Plug PF07715.15 CTQ29075.1 - 1.5e-33 115.5 1.1 3.2e-33 114.5 0.3 2.0 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain OMP_b-brl_3 PF14905.6 CTQ29075.1 - 1.7e-15 56.9 2.7 6.3e-15 55.1 0.3 2.2 2 0 0 2 2 2 1 Outer membrane protein beta-barrel family BBP2 PF07642.11 CTQ29075.1 - 0.0012 18.1 1.2 0.0012 18.1 1.2 2.1 3 1 1 4 4 4 1 Putative beta-barrel porin-2, OmpL-like. bbp2 DUF5020 PF16412.5 CTQ29075.1 - 0.043 13.7 0.0 0.84 9.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5020) DUF4354 PF14263.6 CTQ29076.1 - 0.079 12.8 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) Cas1_AcylT PF07779.12 CTQ29077.1 - 0.063 12.2 0.3 0.074 12.0 0.3 1.0 1 0 0 1 1 1 0 10 TM Acyl Transferase domain found in Cas1p AA_permease PF00324.21 CTQ29078.1 - 9e-146 486.2 42.3 1e-145 486.1 42.3 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ29078.1 - 2.2e-38 132.2 49.5 4.1e-38 131.3 49.6 1.4 1 1 0 1 1 1 1 Amino acid permease LysR_substrate PF03466.20 CTQ29080.1 - 1.5e-49 168.2 1.3 2.3e-49 167.6 1.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29080.1 - 1.7e-16 59.9 1.1 1.7e-16 59.9 1.1 2.8 3 0 0 3 3 3 1 Bacterial regulatory helix-turn-helix protein, lysR family PBP_like PF12727.7 CTQ29080.1 - 0.00068 18.8 0.0 0.0016 17.6 0.0 1.7 1 1 0 1 1 1 1 PBP superfamily domain Cons_hypoth698 PF03601.14 CTQ29082.1 - 5e-112 373.7 24.7 5.7e-112 373.5 24.7 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 698 AP_endonuc_2 PF01261.24 CTQ29083.1 - 3.8e-43 147.4 0.3 6.3e-43 146.7 0.3 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Flagellin_IN PF07196.13 CTQ29083.1 - 0.016 15.4 0.2 0.041 14.1 0.2 1.7 1 0 0 1 1 1 0 Flagellin hook IN motif PTS_IIB PF02302.17 CTQ29084.1 - 2.1e-19 70.0 0.6 1.2e-18 67.6 0.3 2.2 2 0 0 2 2 2 1 PTS system, Lactose/Cellobiose specific IIB subunit PTS_EIIC PF02378.18 CTQ29084.1 - 7e-17 61.4 31.9 7e-17 61.4 31.9 3.0 1 1 1 2 2 2 1 Phosphotransferase system, EIIC MFS_Mycoplasma PF07672.13 CTQ29084.1 - 0.28 10.4 4.8 0.12 11.7 0.8 2.1 1 1 1 2 2 2 0 Mycoplasma MFS transporter PfkB PF00294.24 CTQ29085.1 - 2.9e-68 230.4 0.0 3.6e-68 230.1 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 CTQ29085.1 - 0.0034 16.8 0.0 0.0051 16.2 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PTS_EIIA_2 PF00359.22 CTQ29086.1 - 3.6e-34 117.7 0.0 1.7e-28 99.4 0.0 2.5 2 1 0 2 2 2 2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PTS-HPr PF00381.19 CTQ29086.1 - 7.7e-26 90.2 1.6 1.7e-25 89.0 0.1 2.5 3 1 0 3 3 3 1 PTS HPr component phosphorylation site Nif11 PF07862.11 CTQ29086.1 - 0.088 13.1 0.1 0.44 10.9 0.1 2.2 1 0 0 1 1 1 0 Nif11 domain Usp PF00582.26 CTQ29086.1 - 0.097 13.2 0.3 0.097 13.2 0.3 2.0 2 0 0 2 2 2 0 Universal stress protein family MFS_1 PF07690.16 CTQ29087.1 - 7.6e-48 163.2 70.0 2.6e-35 122.0 36.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ29087.1 - 7.4e-10 38.2 20.8 1.5e-09 37.2 19.6 2.1 1 1 1 2 2 2 1 MFS_1 like family MFS_2 PF13347.6 CTQ29087.1 - 0.037 12.6 35.4 0.0053 15.4 22.5 2.7 1 1 1 2 2 2 0 MFS/sugar transport protein CxxCxxCC PF03692.15 CTQ29088.1 - 1e-05 26.1 3.9 2.7e-05 24.7 3.9 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain Elong-fact-P_C PF09285.11 CTQ29089.1 - 3.9e-19 68.1 0.0 9.1e-19 67.0 0.0 1.6 1 0 0 1 1 1 1 Elongation factor P, C-terminal EFP_N PF08207.12 CTQ29089.1 - 2.4e-16 59.5 0.3 6e-16 58.2 0.2 1.8 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 CTQ29089.1 - 3.4e-14 52.6 2.1 6e-14 51.8 2.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain UxuA PF03786.13 CTQ29090.1 - 3.4e-154 512.9 0.0 3.9e-154 512.7 0.0 1.0 1 0 0 1 1 1 1 D-mannonate dehydratase (UxuA) AP_endonuc_2 PF01261.24 CTQ29090.1 - 2.4e-07 30.4 0.1 1.3e-06 28.0 0.1 2.1 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel RE_XamI PF09572.10 CTQ29090.1 - 0.1 12.3 0.0 0.26 11.0 0.0 1.6 2 0 0 2 2 2 0 XamI restriction endonuclease Mannitol_dh_C PF08125.13 CTQ29091.1 - 4.6e-96 321.1 0.0 6.2e-96 320.6 0.0 1.2 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 CTQ29091.1 - 3.1e-50 170.2 0.0 4.8e-50 169.6 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain cobW PF02492.19 CTQ29092.1 - 3.2e-39 134.3 0.0 4.5e-39 133.8 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 CTQ29092.1 - 2.8e-06 27.2 0.0 6.4e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain AAA_22 PF13401.6 CTQ29092.1 - 0.038 14.3 0.0 0.086 13.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 CTQ29092.1 - 0.04 13.0 0.0 0.07 12.2 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Viral_helicase1 PF01443.18 CTQ29092.1 - 0.23 11.2 0.0 0.34 10.6 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase PAP2 PF01569.21 CTQ29093.1 - 6.4e-13 48.6 4.7 6.4e-13 48.6 4.7 1.9 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 CTQ29093.1 - 9.8e-07 28.6 11.6 1.9e-06 27.7 11.6 1.5 1 1 0 1 1 1 1 PAP2 superfamily PAP2_C PF14360.6 CTQ29093.1 - 0.081 13.5 0.4 0.081 13.5 0.4 2.5 2 1 0 2 2 2 0 PAP2 superfamily C-terminal NLPC_P60 PF00877.19 CTQ29094.1 - 6.5e-34 116.1 0.0 1e-33 115.5 0.0 1.3 1 0 0 1 1 1 1 NlpC/P60 family Peptidase_C92 PF05708.12 CTQ29094.1 - 0.0012 19.0 0.0 0.6 10.2 0.0 2.3 1 1 1 2 2 2 2 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family PCYCGC PF13798.6 CTQ29094.1 - 0.0064 16.4 0.0 0.013 15.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function with PCYCGC motif LRAT PF04970.13 CTQ29094.1 - 0.022 15.1 0.0 0.045 14.1 0.0 1.5 1 0 0 1 1 1 0 Lecithin retinol acyltransferase DHQS PF01959.16 CTQ29094.1 - 0.04 12.8 0.0 0.062 12.2 0.0 1.2 1 0 0 1 1 1 0 3-dehydroquinate synthase II Cupin_3 PF05899.12 CTQ29094.1 - 0.054 13.2 0.0 1.2 8.8 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF861) DUF1287 PF06940.11 CTQ29094.1 - 0.13 11.9 0.0 0.38 10.4 0.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF1287) EAL PF00563.20 CTQ29095.1 - 2.7e-62 210.4 0.1 3.8e-62 209.9 0.1 1.2 1 0 0 1 1 1 1 EAL domain CSS-motif PF12792.7 CTQ29095.1 - 1.6e-41 142.1 0.5 5.7e-40 137.0 0.1 2.2 2 0 0 2 2 2 2 CSS motif domain associated with EAL SBP_bac_5 PF00496.22 CTQ29096.1 - 8.4e-69 232.3 4.4 1.2e-68 231.9 4.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 CTQ29097.1 - 6.3e-41 140.1 14.7 6.3e-41 140.1 14.7 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Renin_r PF07850.14 CTQ29097.1 - 1.3 9.7 2.7 3.3 8.3 0.3 2.6 2 0 0 2 2 2 0 Renin receptor-like protein BPD_transp_1 PF00528.22 CTQ29098.1 - 9.1e-29 100.5 15.2 1.8e-28 99.6 15.2 1.6 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ29098.1 - 3.8e-06 26.8 0.1 3.8e-06 26.8 0.1 4.0 5 1 0 5 5 5 1 N-terminal TM domain of oligopeptide transport permease C DUF4044 PF13253.6 CTQ29098.1 - 0.13 11.8 0.3 0.34 10.4 0.3 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) ABC_tran PF00005.27 CTQ29099.1 - 1.6e-57 193.8 0.0 3.2e-29 102.2 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ29099.1 - 4.8e-12 46.3 12.9 8.2e-06 25.8 0.1 4.1 2 2 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system oligo_HPY PF08352.12 CTQ29099.1 - 2.9e-10 40.5 0.0 0.00017 22.0 0.0 2.5 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 CTQ29099.1 - 1.3e-09 37.8 5.8 0.00026 20.5 0.3 3.7 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ29099.1 - 9.2e-09 35.7 1.9 0.00063 20.0 0.1 3.4 2 2 0 2 2 2 2 AAA domain AAA_16 PF13191.6 CTQ29099.1 - 3.9e-06 27.4 6.3 0.001 19.5 0.7 2.7 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 CTQ29099.1 - 6.8e-06 25.7 0.2 0.078 12.7 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_13 PF13166.6 CTQ29099.1 - 0.00011 21.1 0.0 0.0077 14.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 CTQ29099.1 - 0.00026 20.6 0.7 0.25 10.9 0.1 3.1 3 1 0 3 3 3 2 AAA domain SbcCD_C PF13558.6 CTQ29099.1 - 0.00032 20.9 0.1 0.23 11.7 0.0 3.6 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_7 PF12775.7 CTQ29099.1 - 0.0023 17.5 0.1 1.3 8.5 0.0 2.4 2 0 0 2 2 2 2 P-loop containing dynein motor region RsgA_GTPase PF03193.16 CTQ29099.1 - 0.0028 17.6 0.7 1.1 9.1 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase Mg_chelatase PF01078.21 CTQ29099.1 - 0.0051 16.2 0.2 0.64 9.4 0.0 2.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 CTQ29099.1 - 0.0058 16.6 0.8 6.9 6.7 0.0 3.2 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) Pox_A32 PF04665.12 CTQ29099.1 - 0.017 14.6 1.7 3.3 7.1 0.1 2.7 3 0 0 3 3 3 0 Poxvirus A32 protein DUF87 PF01935.17 CTQ29099.1 - 0.13 12.3 4.0 5.2 7.1 0.1 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain NB-ARC PF00931.22 CTQ29099.1 - 0.14 11.3 0.2 37 3.4 0.0 3.3 4 0 0 4 4 4 0 NB-ARC domain Sigma54_activat PF00158.26 CTQ29099.1 - 0.17 11.6 1.6 7.3 6.3 0.0 3.3 4 0 0 4 4 4 0 Sigma-54 interaction domain AAA_24 PF13479.6 CTQ29099.1 - 0.2 11.4 1.0 19 4.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 CTQ29099.1 - 0.25 11.5 1.7 14 5.8 0.3 3.0 2 2 0 2 2 2 0 AAA domain AIG1 PF04548.16 CTQ29099.1 - 0.34 10.2 3.7 4.2 6.6 0.4 2.5 2 0 0 2 2 2 0 AIG1 family NACHT PF05729.12 CTQ29099.1 - 0.49 10.3 4.7 12 5.8 0.0 3.7 3 1 0 3 3 3 0 NACHT domain YejG PF13989.6 CTQ29100.1 - 7.9e-50 167.7 0.0 8.9e-50 167.6 0.0 1.0 1 0 0 1 1 1 1 YejG-like protein Transglycosylas PF06737.14 CTQ29100.1 - 0.084 13.5 0.0 0.13 12.9 0.0 1.3 1 0 0 1 1 1 0 Transglycosylase-like domain MFS_1 PF07690.16 CTQ29101.1 - 1.6e-47 162.2 96.6 6.9e-45 153.5 53.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ29101.1 - 1.2e-12 47.5 12.7 1.2e-12 47.5 12.7 2.1 1 1 1 2 2 2 1 Sugar (and other) transporter Folate_carrier PF01770.18 CTQ29101.1 - 3.9e-06 25.9 1.2 3.9e-06 25.9 1.2 2.3 1 1 0 2 2 2 1 Reduced folate carrier MFS_4 PF06779.14 CTQ29101.1 - 4.4e-06 26.2 37.0 6.6e-06 25.6 37.0 1.3 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB EIIC-GAT PF03611.14 CTQ29101.1 - 0.39 9.8 32.9 0.054 12.6 12.0 3.4 1 1 2 3 3 3 0 PTS system sugar-specific permease component PseudoU_synth_2 PF00849.22 CTQ29102.1 - 3.9e-18 66.0 0.0 1.4e-17 64.2 0.0 1.8 1 1 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 CTQ29102.1 - 7.3e-11 41.6 0.1 1.4e-10 40.7 0.1 1.5 1 0 0 1 1 1 1 S4 domain ResIII PF04851.15 CTQ29103.1 - 3.9e-23 82.3 0.0 6.4e-23 81.6 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 CTQ29103.1 - 3.2e-14 53.2 0.0 8.9e-14 51.8 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 CTQ29103.1 - 1.9e-09 37.5 0.1 7.4e-08 32.4 0.0 2.5 2 1 0 2 2 2 1 DEAD/DEAH box helicase SWI2_SNF2 PF18766.1 CTQ29103.1 - 3.7e-07 30.1 0.0 7.6e-07 29.0 0.0 1.5 2 0 0 2 2 2 1 SWI2/SNF2 ATPase AAA_30 PF13604.6 CTQ29103.1 - 5e-05 23.1 0.1 0.00013 21.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain UPF0547 PF10571.9 CTQ29103.1 - 0.00026 21.0 7.3 0.0019 18.2 2.3 2.4 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 DZR PF12773.7 CTQ29103.1 - 0.0027 17.7 5.0 0.02 14.9 1.6 2.5 2 0 0 2 2 2 1 Double zinc ribbon zf-tcix PF14952.6 CTQ29103.1 - 0.009 15.6 3.2 0.031 13.9 0.3 2.3 2 0 0 2 2 2 1 Putative treble-clef, zinc-finger, Zn-binding AAA_22 PF13401.6 CTQ29103.1 - 0.044 14.0 0.2 0.14 12.4 0.2 1.8 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 CTQ29103.1 - 0.056 12.7 0.0 0.085 12.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) zinc_ribbon_2 PF13240.6 CTQ29103.1 - 0.19 11.5 12.3 0.69 9.7 0.2 2.9 3 0 0 3 3 3 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 CTQ29103.1 - 0.22 11.0 9.6 3.5 7.2 4.1 3.0 2 1 1 3 3 3 0 zinc-ribbon domain Ribosomal_L25p PF01386.19 CTQ29104.1 - 3.9e-24 85.0 0.1 4.3e-24 84.8 0.1 1.0 1 0 0 1 1 1 1 Ribosomal L25p family HTH_1 PF00126.27 CTQ29105.1 - 2.3e-13 49.9 0.9 6.6e-13 48.4 0.9 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 CTQ29105.1 - 4.3e-07 29.5 0.9 8e-07 28.6 0.9 1.5 1 0 0 1 1 1 1 LysR substrate binding domain HTH_23 PF13384.6 CTQ29105.1 - 0.087 12.6 0.1 0.74 9.7 0.0 2.4 2 0 0 2 2 2 0 Homeodomain-like domain Beta-lactamase PF00144.24 CTQ29106.1 - 8.7e-38 130.4 3.4 1.3e-37 129.8 3.4 1.2 1 0 0 1 1 1 1 Beta-lactamase NUDIX PF00293.28 CTQ29107.1 - 1.5e-05 25.1 0.1 2.1e-05 24.6 0.1 1.3 1 0 0 1 1 1 1 NUDIX domain RNA_pol_inhib PF16857.5 CTQ29107.1 - 0.092 12.5 0.8 0.23 11.3 0.8 1.7 1 0 0 1 1 1 0 RNA polymerase inhibitor DeoRC PF00455.22 CTQ29108.1 - 1.1e-42 145.7 0.7 1.4e-42 145.4 0.7 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ29108.1 - 1.4e-15 56.8 0.2 2.4e-15 56.0 0.2 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ29108.1 - 1.3e-08 34.7 0.2 2.5e-08 33.7 0.2 1.6 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 CTQ29108.1 - 5.8e-06 25.9 2.3 1e-05 25.0 0.5 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_Mga PF08280.11 CTQ29108.1 - 0.00082 19.4 0.1 0.0015 18.6 0.1 1.3 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain Put_DNA-bind_N PF06971.13 CTQ29108.1 - 0.0074 16.3 0.7 0.019 14.9 0.2 2.0 2 0 0 2 2 2 1 Putative DNA-binding protein N-terminus FeoC PF09012.10 CTQ29108.1 - 0.0097 16.0 0.1 0.02 15.0 0.1 1.4 1 0 0 1 1 1 1 FeoC like transcriptional regulator Mga PF05043.13 CTQ29108.1 - 0.012 16.1 0.1 0.02 15.5 0.1 1.3 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_20 PF12840.7 CTQ29108.1 - 0.016 15.3 0.1 0.041 13.9 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain DDRGK PF09756.9 CTQ29108.1 - 0.047 13.3 0.1 0.072 12.7 0.1 1.2 1 0 0 1 1 1 0 DDRGK domain FaeA PF04703.12 CTQ29108.1 - 0.055 13.9 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein Rrf2 PF02082.20 CTQ29108.1 - 0.12 12.8 0.4 0.28 11.5 0.1 1.7 2 0 0 2 2 2 0 Transcriptional regulator Fe_dep_repress PF01325.19 CTQ29108.1 - 0.16 12.2 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain NA37 PF04245.13 CTQ29109.1 - 1.3e-96 323.8 0.0 1.5e-96 323.6 0.0 1.0 1 0 0 1 1 1 1 37-kD nucleoid-associated bacterial protein DUF1414 PF07208.11 CTQ29110.1 - 1.7e-25 88.7 1.1 1.7e-25 88.7 1.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1414) DUF4487 PF14868.6 CTQ29110.1 - 0.063 12.1 0.2 0.074 11.9 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4487) DUF3413 PF11893.8 CTQ29111.1 - 3.1e-103 344.2 14.2 4.2e-103 343.8 14.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3413) Sulfatase PF00884.23 CTQ29111.1 - 4.2e-28 98.6 1.7 9.4e-28 97.5 0.3 2.1 2 0 0 2 2 2 1 Sulfatase DUF229 PF02995.17 CTQ29111.1 - 3.2e-07 29.3 0.0 0.00054 18.7 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF229) Phosphodiest PF01663.22 CTQ29111.1 - 0.0023 17.6 0.0 0.59 9.7 0.0 2.2 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF1501 PF07394.12 CTQ29111.1 - 0.065 12.3 0.0 0.11 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) Metalloenzyme PF01676.18 CTQ29111.1 - 0.076 12.4 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Metalloenzyme superfamily AI-2E_transport PF01594.16 CTQ29112.1 - 2.9e-50 171.3 34.0 3.9e-50 170.9 34.0 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF3149 PF11346.8 CTQ29112.1 - 0.25 11.0 0.2 0.25 11.0 0.2 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF3149) Wzy_C_2 PF11846.8 CTQ29112.1 - 1.4 8.8 5.5 0.62 9.9 0.2 2.5 3 0 0 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal Oleosin PF01277.17 CTQ29112.1 - 3.5 7.4 15.4 6.7 6.5 5.0 3.0 2 0 0 2 2 2 0 Oleosin Ecotin PF03974.13 CTQ29113.1 - 8.1e-54 180.8 0.0 9.5e-54 180.6 0.0 1.0 1 0 0 1 1 1 1 Ecotin Mqo PF06039.15 CTQ29114.1 - 5.2e-230 764.1 0.0 6e-230 763.9 0.0 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) DAO PF01266.24 CTQ29114.1 - 2.3e-07 30.7 0.1 4.8e-07 29.7 0.1 1.5 1 1 1 2 2 2 1 FAD dependent oxidoreductase Sulfate_transp PF00916.20 CTQ29115.1 - 3.1e-38 131.5 45.0 9.4e-23 80.6 11.0 2.4 2 1 1 3 3 3 2 Sulfate permease family MFS_MOT1 PF16983.5 CTQ29115.1 - 5.2e-08 33.3 45.6 2.1e-05 24.9 6.6 4.1 4 0 0 4 4 4 3 Molybdate transporter of MFS superfamily HCO3_cotransp PF00955.21 CTQ29115.1 - 9.5 4.9 17.6 0.036 12.9 1.6 3.3 2 1 0 3 3 3 0 HCO3- transporter family MgtE PF01769.16 CTQ29116.1 - 1.4e-24 86.8 11.3 2.4e-24 86.1 11.3 1.4 1 0 0 1 1 1 1 Divalent cation transporter MgtE_N PF03448.17 CTQ29116.1 - 1.9e-23 83.0 0.4 1.9e-23 83.0 0.4 2.9 3 0 0 3 3 3 1 MgtE intracellular N domain CBS PF00571.28 CTQ29116.1 - 3.1e-10 40.3 0.7 2e-05 24.9 0.3 2.7 2 0 0 2 2 2 2 CBS domain DUF3659 PF12396.8 CTQ29116.1 - 0.053 13.5 0.5 20 5.2 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3659) IreB PF06135.12 CTQ29116.1 - 0.17 12.1 0.0 0.44 10.8 0.0 1.7 1 0 0 1 1 1 0 IreB regulatory phosphoprotein ABC_tran PF00005.27 CTQ29117.1 - 7.3e-27 94.5 0.0 1.4e-26 93.7 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ29117.1 - 1.2e-06 28.6 0.1 0.017 15.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ29117.1 - 6.3e-06 25.8 0.6 0.0036 16.8 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ29117.1 - 0.00078 19.9 0.2 0.0018 18.7 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain ABC_membrane PF00664.23 CTQ29117.1 - 0.0016 18.2 7.2 0.0017 18.1 6.2 1.6 1 1 0 1 1 1 1 ABC transporter transmembrane region AAA_15 PF13175.6 CTQ29117.1 - 0.0027 17.5 0.1 0.036 13.8 0.1 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 CTQ29117.1 - 0.0045 16.7 0.4 0.016 14.9 0.4 1.9 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 CTQ29117.1 - 0.0061 15.4 0.0 1.4 7.6 0.0 2.2 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_25 PF13481.6 CTQ29117.1 - 0.079 12.5 0.2 0.22 11.1 0.2 1.8 1 1 0 1 1 1 0 AAA domain Ploopntkinase3 PF18751.1 CTQ29117.1 - 0.081 12.8 0.2 0.26 11.2 0.1 1.9 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 AAA_28 PF13521.6 CTQ29117.1 - 0.09 13.0 0.1 1.8 8.8 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 CTQ29117.1 - 0.22 12.0 0.1 0.39 11.2 0.1 1.3 1 0 0 1 1 1 0 AAA domain 2OG-FeII_Oxy_2 PF13532.6 CTQ29118.1 - 1.7e-53 181.7 0.0 1.9e-53 181.6 0.0 1.0 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Ada_Zn_binding PF02805.16 CTQ29119.1 - 5.9e-31 106.3 10.4 1.4e-30 105.1 10.4 1.7 1 0 0 1 1 1 1 Metal binding domain of Ada DNA_binding_1 PF01035.20 CTQ29119.1 - 5e-30 103.5 1.0 5e-30 103.5 1.0 2.2 2 1 0 2 2 2 1 6-O-methylguanine DNA methyltransferase, DNA binding domain HTH_AraC PF00165.23 CTQ29119.1 - 2.9e-19 68.7 0.0 1.2e-10 41.2 0.0 3.2 4 0 0 4 4 4 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 CTQ29119.1 - 1e-18 67.4 0.7 2.7e-18 66.0 0.7 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain Methyltransf_1N PF02870.15 CTQ29119.1 - 1.2e-05 26.0 0.0 2.1e-05 25.2 0.0 1.5 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HTH_15 PF12324.8 CTQ29119.1 - 0.17 11.9 0.0 5.2 7.1 0.0 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain of alkylmercury lyase ApbE PF02424.15 CTQ29120.1 - 3.4e-78 262.7 0.1 4.2e-78 262.4 0.1 1.0 1 0 0 1 1 1 1 ApbE family Transglut_core2 PF13369.6 CTQ29120.1 - 0.027 14.1 0.0 0.095 12.3 0.0 1.9 2 0 0 2 2 2 0 Transglutaminase-like superfamily Porin_1 PF00267.21 CTQ29121.1 - 6.1e-154 512.5 29.4 6.9e-154 512.3 29.4 1.0 1 0 0 1 1 1 1 Gram-negative porin RcsD_ABL PF16359.5 CTQ29122.1 - 2.1e-40 137.0 0.1 6.9e-40 135.4 0.1 2.0 1 0 0 1 1 1 1 RcsD-ABL domain Hpt PF01627.23 CTQ29122.1 - 4.6e-12 46.0 0.6 1.6e-11 44.3 0.0 2.4 2 0 0 2 2 2 1 Hpt domain HATPase_c PF02518.26 CTQ29122.1 - 6.2e-08 33.1 0.0 1.5e-07 31.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 CTQ29123.1 - 6.9e-25 87.4 0.1 1.1e-24 86.7 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 CTQ29123.1 - 6.9e-19 67.1 0.3 1.2e-18 66.4 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 CTQ29123.1 - 5.2e-05 22.8 0.3 0.00016 21.3 0.2 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 CTQ29123.1 - 7.2e-05 22.2 0.1 0.00016 21.1 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 CTQ29123.1 - 0.00077 19.2 0.0 0.0017 18.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ29123.1 - 0.0014 18.4 0.0 0.0039 16.9 0.0 1.7 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 CTQ29123.1 - 0.16 12.0 0.0 0.59 10.2 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn helix TerB PF05099.13 CTQ29123.1 - 0.19 11.7 0.0 0.35 10.8 0.0 1.4 1 0 0 1 1 1 0 Tellurite resistance protein TerB RcsC PF09456.10 CTQ29124.1 - 2e-34 117.4 0.1 1.1e-33 115.1 0.0 2.3 2 0 0 2 2 2 1 RcsC Alpha-Beta-Loop (ABL) Response_reg PF00072.24 CTQ29124.1 - 1.7e-29 102.3 0.1 3.5e-29 101.2 0.1 1.6 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 CTQ29124.1 - 5.8e-29 100.9 0.0 1.2e-28 99.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ29124.1 - 1.8e-16 59.9 0.8 6.5e-16 58.1 0.0 2.5 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 CTQ29124.1 - 0.058 13.3 0.1 0.22 11.5 0.0 2.0 2 0 0 2 2 2 0 GHKL domain OKR_DC_1_N PF03709.15 CTQ29124.1 - 0.1 12.9 0.2 4.3 7.7 0.0 2.9 3 0 0 3 3 3 0 Orn/Lys/Arg decarboxylase, N-terminal domain DNA_topoisoIV PF00521.20 CTQ29125.1 - 1.9e-153 511.4 0.0 2.4e-153 511.1 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 CTQ29125.1 - 9.4e-82 268.3 12.0 5.2e-16 57.9 0.2 6.6 7 0 0 7 7 7 6 DNA gyrase C-terminal domain, beta-propeller Methyltransf_23 PF13489.6 CTQ29126.1 - 3.2e-23 82.4 0.0 4e-23 82.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ29126.1 - 2.5e-22 79.3 0.1 5.1e-22 78.3 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ29126.1 - 2.5e-19 69.8 0.1 3.9e-19 69.1 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ29126.1 - 4.2e-18 65.6 0.0 5.3e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ29126.1 - 1.5e-15 57.8 0.0 2.3e-15 57.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 CTQ29126.1 - 3.7e-11 42.8 0.0 4.6e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family CMAS PF02353.20 CTQ29126.1 - 7.5e-10 38.5 0.0 9.5e-10 38.2 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase NodS PF05401.11 CTQ29126.1 - 2.1e-09 37.3 0.0 2.6e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 CTQ29126.1 - 6.9e-07 29.0 0.0 1e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 CTQ29126.1 - 2.1e-06 27.4 0.0 2.9e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_9 PF08003.11 CTQ29126.1 - 5.1e-05 22.4 0.1 6.4e-05 22.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MetW PF07021.12 CTQ29126.1 - 6.3e-05 22.6 0.0 9.2e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.6 CTQ29126.1 - 0.0017 18.4 0.1 0.0023 17.9 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 CTQ29126.1 - 0.02 14.2 0.2 0.062 12.6 0.2 1.7 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G TPMT PF05724.11 CTQ29126.1 - 0.048 13.3 0.0 0.11 12.2 0.0 1.6 2 0 0 2 2 2 0 Thiopurine S-methyltransferase (TPMT) DREV PF05219.12 CTQ29126.1 - 0.049 12.7 0.0 0.094 11.8 0.0 1.4 1 1 0 1 1 1 0 DREV methyltransferase Sterol_MT_C PF08498.10 CTQ29126.1 - 0.087 13.2 0.1 1.3 9.4 0.0 2.4 1 1 1 2 2 2 0 Sterol methyltransferase C-terminal Methyltransf_18 PF12847.7 CTQ29126.1 - 0.11 12.4 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 CTQ29126.1 - 0.12 11.7 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Ribonuc_red_lgC PF02867.15 CTQ29127.1 - 9.6e-122 407.2 0.0 1e-119 400.4 0.0 2.3 1 1 0 1 1 1 1 Ribonucleotide reductase, barrel domain ATP-cone PF03477.16 CTQ29127.1 - 6.1e-16 58.8 0.1 1.5e-15 57.5 0.1 1.8 1 0 0 1 1 1 1 ATP cone domain Ribonuc_red_lgN PF00317.21 CTQ29127.1 - 2.8e-13 49.7 0.1 7.5e-13 48.3 0.1 1.8 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain Ribonuc_red_sm PF00268.21 CTQ29128.1 - 2.5e-50 171.5 1.2 3.3e-50 171.1 1.2 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Fer2 PF00111.27 CTQ29129.1 - 2.3e-12 46.7 1.1 2.5e-12 46.5 1.1 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 CTQ29129.1 - 0.017 15.1 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain GDPD PF03009.17 CTQ29130.1 - 1e-75 254.8 0.1 1.2e-75 254.7 0.1 1.0 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family CRISPR_Cas2 PF09827.9 CTQ29130.1 - 0.0014 18.8 0.1 0.0028 17.8 0.1 1.5 1 0 0 1 1 1 1 CRISPR associated protein Cas2 DUF1730 PF08331.10 CTQ29130.1 - 0.073 13.0 0.6 0.65 10.0 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1730) MFS_1 PF07690.16 CTQ29131.1 - 2.3e-46 158.4 35.3 7.5e-45 153.4 27.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF4131 PF13567.6 CTQ29131.1 - 5.4 6.6 16.0 0.25 11.0 1.9 4.0 5 1 1 6 6 6 0 Domain of unknown function (DUF4131) DAO PF01266.24 CTQ29132.1 - 5.8e-54 184.0 2.1 8.1e-54 183.5 2.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer2_BFD PF04324.15 CTQ29132.1 - 1e-09 38.6 3.2 2.9e-09 37.1 3.2 1.9 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain FAD_oxidored PF12831.7 CTQ29132.1 - 6.2e-08 32.4 1.0 5.2e-07 29.4 1.0 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 CTQ29132.1 - 6.7e-07 28.7 4.9 8.6e-06 25.1 4.9 2.1 1 1 0 1 1 1 1 FAD binding domain DAO_C PF16901.5 CTQ29132.1 - 1.3e-05 25.0 0.0 2.4e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase FAD_binding_3 PF01494.19 CTQ29132.1 - 1.4e-05 24.5 2.2 0.0001 21.7 2.2 2.0 1 1 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 CTQ29132.1 - 0.00023 21.3 0.9 0.0011 19.2 1.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 CTQ29132.1 - 0.00034 20.0 0.0 0.0033 16.7 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 CTQ29132.1 - 0.0023 17.2 0.2 0.011 15.0 0.1 2.0 2 0 0 2 2 2 1 Thi4 family HI0933_like PF03486.14 CTQ29132.1 - 0.0024 16.7 0.1 0.011 14.5 0.1 1.8 2 0 0 2 2 2 1 HI0933-like protein 3HCDH_N PF02737.18 CTQ29132.1 - 0.011 15.6 0.1 0.018 14.9 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 CTQ29132.1 - 0.013 16.0 0.1 0.42 11.2 0.3 2.8 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ29132.1 - 0.035 13.2 1.3 0.053 12.6 1.3 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 CTQ29132.1 - 0.042 13.1 0.8 0.062 12.6 0.8 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 CTQ29132.1 - 0.28 10.3 0.1 5.8 6.0 0.0 2.0 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 CTQ29133.1 - 6.1e-51 173.8 0.0 7e-51 173.6 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 CTQ29133.1 - 2.2e-07 30.8 2.6 7.6e-06 25.7 2.6 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 CTQ29133.1 - 7.2e-05 22.2 0.0 0.00018 20.9 0.1 1.6 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 CTQ29133.1 - 0.0015 18.7 0.3 0.0015 18.7 0.3 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 CTQ29133.1 - 0.0021 17.4 0.3 0.0031 16.8 0.3 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 CTQ29133.1 - 0.0024 17.2 0.8 0.0036 16.6 0.0 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ29133.1 - 0.005 16.0 0.1 0.16 11.0 0.2 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A HI0933_like PF03486.14 CTQ29133.1 - 0.009 14.8 0.1 0.017 13.9 0.1 1.4 1 0 0 1 1 1 1 HI0933-like protein Lycopene_cycl PF05834.12 CTQ29133.1 - 0.014 14.5 0.1 0.67 8.9 0.2 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein Pyr_redox PF00070.27 CTQ29133.1 - 0.089 13.4 0.1 0.36 11.4 0.0 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 CTQ29133.1 - 0.26 10.6 0.4 0.41 9.9 0.4 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase CCG PF02754.16 CTQ29134.1 - 1.1e-32 112.1 0.8 1.6e-16 60.3 0.1 2.4 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 CTQ29134.1 - 2.3e-10 40.8 5.6 2.3e-10 40.8 5.6 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 CTQ29134.1 - 5.8e-07 30.0 6.5 5.8e-07 30.0 6.5 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ29134.1 - 1.2e-06 28.6 12.8 0.0014 18.7 0.4 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ29134.1 - 2.5e-06 27.5 11.8 0.00085 19.4 1.2 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 CTQ29134.1 - 4.5e-06 27.2 9.5 4.5e-06 27.2 9.5 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ29134.1 - 0.00034 20.9 17.0 0.0042 17.5 1.5 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4 PF00037.27 CTQ29134.1 - 0.00051 19.8 17.5 0.0033 17.2 2.6 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 CTQ29134.1 - 0.00075 19.6 12.6 0.094 12.9 1.0 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 CTQ29134.1 - 0.0057 17.6 13.4 0.1 13.5 0.6 2.8 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 CTQ29134.1 - 0.016 15.3 18.7 0.059 13.5 1.5 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_6 PF12837.7 CTQ29134.1 - 0.051 13.7 21.5 0.052 13.7 3.9 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 CTQ29134.1 - 0.099 13.5 9.8 0.76 10.7 0.7 2.8 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 CTQ29134.1 - 0.11 12.3 7.4 0.26 11.1 0.2 2.6 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 CTQ29134.1 - 0.23 11.7 10.0 0.43 10.8 0.2 2.7 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 CTQ29134.1 - 1.1 10.3 16.9 0.45 11.6 4.1 2.9 2 0 0 2 2 2 0 4Fe-4S binding domain TACI-CRD2 PF09305.10 CTQ29134.1 - 1.4 9.0 10.4 0.28 11.2 1.5 2.9 2 0 0 2 2 2 0 TACI, cysteine-rich domain Fer4_13 PF13370.6 CTQ29134.1 - 3.6 8.2 16.0 2.8 8.6 0.3 3.0 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I c-SKI_SMAD_bind PF08782.10 CTQ29134.1 - 5.1 7.4 6.1 12 6.2 0.2 2.6 2 0 0 2 2 2 0 c-SKI Smad4 binding domain HpcH_HpaI PF03328.14 CTQ29135.1 - 1.1e-65 220.8 0.0 1.3e-65 220.6 0.0 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family MFS_1 PF07690.16 CTQ29136.1 - 1.5e-45 155.7 42.1 1.5e-45 155.7 42.1 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily O-antigen_lig PF13425.6 CTQ29136.1 - 1.2 7.9 3.8 2.3 6.9 3.8 1.5 1 0 0 1 1 1 0 O-antigen ligase like membrane protein MR_MLE_C PF13378.6 CTQ29137.1 - 1.3e-38 132.7 0.0 1.7e-38 132.4 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 CTQ29137.1 - 2.3e-08 34.3 0.0 3.7e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IclR PF01614.18 CTQ29138.1 - 1.7e-39 134.6 0.0 2.2e-39 134.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 CTQ29138.1 - 2e-07 30.7 0.1 1.1e-06 28.3 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 CTQ29138.1 - 0.0081 16.0 0.0 0.024 14.5 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 CTQ29138.1 - 0.0087 15.9 0.0 0.06 13.2 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 CTQ29138.1 - 0.014 15.2 0.0 0.032 14.1 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 CTQ29138.1 - 0.015 15.6 0.0 0.035 14.5 0.0 1.6 1 0 0 1 1 1 0 Penicillinase repressor DUF742 PF05331.11 CTQ29138.1 - 0.037 13.8 0.0 0.072 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF742) MoCF_biosynth PF00994.24 CTQ29139.1 - 1.1e-32 112.7 0.0 2.5e-31 108.3 0.0 2.2 2 0 0 2 2 2 1 Probable molybdopterin binding domain Glyco_trans_4_4 PF13579.6 CTQ29139.1 - 0.0019 18.6 2.1 0.04 14.4 0.8 2.3 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain CinA_KH PF18146.1 CTQ29139.1 - 0.0047 17.0 0.0 0.017 15.3 0.0 1.9 2 0 0 2 2 2 1 Damage-inducible protein CinA KH domain CinA PF02464.17 CTQ29139.1 - 0.0069 16.0 0.5 2 8.0 0.0 2.6 3 0 0 3 3 3 2 Competence-damaged protein YfaZ PF07437.11 CTQ29140.1 - 1.4e-77 259.4 4.3 1.6e-77 259.2 4.3 1.0 1 0 0 1 1 1 1 YfaZ precursor LptD PF04453.14 CTQ29140.1 - 0.0003 20.1 0.0 0.0003 20.1 0.0 1.1 1 0 0 1 1 1 1 LPS transport system D OMP_b-brl PF13505.6 CTQ29140.1 - 0.012 15.8 11.8 0.076 13.1 11.8 2.5 1 1 0 1 1 1 0 Outer membrane protein beta-barrel domain OmpA_membrane PF01389.17 CTQ29140.1 - 0.017 14.8 0.1 0.4 10.4 0.0 2.3 1 1 0 2 2 2 0 OmpA-like transmembrane domain BBP2 PF07642.11 CTQ29140.1 - 0.03 13.5 0.1 0.033 13.4 0.1 1.2 1 0 0 1 1 1 0 Putative beta-barrel porin-2, OmpL-like. bbp2 Alpha-amyl_C2 PF07821.12 CTQ29140.1 - 0.085 13.1 0.2 0.15 12.3 0.2 1.4 1 0 0 1 1 1 0 Alpha-amylase C-terminal beta-sheet domain OEP PF02321.18 CTQ29140.1 - 3.4 7.4 4.0 64 3.3 2.6 2.6 1 1 1 2 2 2 0 Outer membrane efflux protein Transposase_31 PF04754.12 CTQ29141.1 - 8.4e-89 296.6 0.0 1.1e-88 296.2 0.0 1.2 1 0 0 1 1 1 1 Putative transposase, YhgA-like Yae1_N PF09811.9 CTQ29141.1 - 0.05 13.3 10.1 0.11 12.2 10.1 1.6 1 0 0 1 1 1 0 Essential protein Yae1, N terminal Zwilch PF09817.9 CTQ29141.1 - 0.063 11.7 0.0 0.085 11.3 0.0 1.1 1 0 0 1 1 1 0 RZZ complex, subunit zwilch NUDIX PF00293.28 CTQ29142.1 - 1e-19 70.8 0.0 1.2e-19 70.7 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 CTQ29142.1 - 0.00016 21.6 0.0 0.00039 20.4 0.0 1.6 1 1 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 CTQ29142.1 - 0.049 13.1 0.1 0.11 12.0 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4916) AMP-binding PF00501.28 CTQ29143.1 - 9.1e-53 179.4 0.2 5.6e-51 173.5 0.2 2.1 1 1 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CTQ29143.1 - 1.8e-07 32.0 0.1 4.8e-07 30.7 0.1 1.8 1 1 0 1 1 1 1 AMP-binding enzyme C-terminal domain MR_MLE_C PF13378.6 CTQ29144.1 - 5.2e-18 65.4 0.3 8e-18 64.8 0.3 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like Phage-A118_gp45 PF10653.9 CTQ29144.1 - 0.093 12.8 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein gp45 of Bacteriophage A118 Enolase_like_N PF18374.1 CTQ29144.1 - 0.095 12.1 0.1 0.2 11.1 0.1 1.5 1 0 0 1 1 1 0 Enolase N-terminal domain-like ECH_1 PF00378.20 CTQ29145.1 - 4.9e-79 265.2 0.0 5.9e-79 264.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 CTQ29145.1 - 2.4e-23 83.2 0.2 2.9e-23 82.9 0.2 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 CTQ29145.1 - 0.022 14.7 0.2 0.62 10.0 0.0 2.3 2 0 0 2 2 2 0 Peptidase family S49 SDH_sah PF01972.16 CTQ29145.1 - 0.11 11.5 0.0 0.16 10.9 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DUF1666 PF07891.12 CTQ29145.1 - 0.18 11.5 0.2 0.26 10.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1666) Abhydrolase_6 PF12697.7 CTQ29146.1 - 1.7e-15 58.2 7.7 2.1e-15 57.9 7.7 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 CTQ29146.1 - 8.4e-15 55.1 1.0 1.1e-14 54.8 1.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CTQ29146.1 - 5.8e-08 32.3 0.1 8.4e-08 31.8 0.1 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 CTQ29146.1 - 0.00031 20.9 0.3 0.00069 19.8 0.2 1.6 1 1 1 2 2 2 1 Thioesterase domain DUF915 PF06028.11 CTQ29146.1 - 0.012 15.0 0.0 0.097 12.0 0.1 2.0 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) Abhydrolase_5 PF12695.7 CTQ29146.1 - 0.013 15.2 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family TPP_enzyme_M_2 PF16582.5 CTQ29147.1 - 3.6e-83 278.4 13.2 5.6e-83 277.8 13.2 1.3 1 0 0 1 1 1 1 Middle domain of thiamine pyrophosphate TPP_enzyme_N PF02776.18 CTQ29147.1 - 3.8e-30 104.8 2.1 1.3e-26 93.2 0.1 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 CTQ29147.1 - 2e-11 43.9 0.0 6.3e-11 42.3 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DUF2016 PF09436.10 CTQ29147.1 - 0.21 11.4 3.9 0.33 10.8 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF2016) Chorismate_bind PF00425.18 CTQ29148.1 - 7.8e-65 219.0 0.0 9.9e-65 218.7 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Acetyltransf_10 PF13673.7 CTQ29149.1 - 3.7e-18 65.7 0.0 4.1e-18 65.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ29149.1 - 4.2e-09 36.7 0.1 5.2e-09 36.4 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ29149.1 - 3.9e-08 33.6 0.0 5.5e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ29149.1 - 1.9e-07 31.2 0.1 4.8e-07 29.9 0.1 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_5 PF13444.6 CTQ29149.1 - 0.015 16.0 0.2 0.12 13.1 0.1 2.0 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ29149.1 - 0.042 14.0 0.0 0.071 13.2 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Lactamase_B_2 PF12706.7 CTQ29150.1 - 5.1e-20 71.9 0.0 1.4e-09 37.8 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 CTQ29150.1 - 3.6e-06 27.1 0.1 8.1e-06 26.0 0.1 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 CTQ29150.1 - 0.00015 21.3 0.1 0.00062 19.4 0.0 1.9 2 0 0 2 2 2 1 tRNase Z endonuclease SurA_N PF09312.11 CTQ29150.1 - 0.2 11.7 0.4 0.33 11.0 0.4 1.2 1 0 0 1 1 1 0 SurA N-terminal domain Proton_antipo_M PF00361.20 CTQ29151.1 - 7.5e-89 297.8 27.5 1.6e-88 296.8 27.5 1.5 1 0 0 1 1 1 1 Proton-conducting membrane transporter NADHdeh_related PF10125.9 CTQ29151.1 - 7.7e-06 25.4 4.8 3.2e-05 23.4 4.8 2.1 1 0 0 1 1 1 1 NADH dehydrogenase I, subunit N related protein NADH_dehy_S2_C PF06444.11 CTQ29151.1 - 0.054 14.0 2.6 1.1 9.8 0.0 3.3 2 0 0 2 2 2 0 NADH dehydrogenase subunit 2 C-terminus Proton_antipo_M PF00361.20 CTQ29152.1 - 1.5e-69 234.4 27.1 2.9e-69 233.5 27.1 1.5 1 0 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 CTQ29152.1 - 0.11 12.6 0.1 0.11 12.6 0.1 3.7 4 0 0 4 4 4 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PrgI PF12666.7 CTQ29152.1 - 1 10.1 0.0 1 10.1 0.0 5.4 3 2 0 3 3 3 0 PrgI family protein Proton_antipo_M PF00361.20 CTQ29153.1 - 6.8e-98 327.5 22.9 6.8e-98 327.5 22.9 2.4 3 0 0 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 CTQ29153.1 - 7.7e-23 80.3 3.2 7.7e-23 80.3 3.2 3.0 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q2 PF00420.24 CTQ29154.1 - 8.1e-21 73.6 6.4 8.8e-21 73.5 6.4 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NAD4L PF06235.11 CTQ29154.1 - 0.0099 15.9 1.8 0.013 15.5 1.8 1.2 1 0 0 1 1 1 1 NADH dehydrogenase subunit 4L (NAD4L) DUF4481 PF14800.6 CTQ29154.1 - 0.034 13.6 0.2 0.045 13.2 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4481) ATP1G1_PLM_MAT8 PF02038.16 CTQ29154.1 - 0.057 12.9 1.1 0.057 12.9 1.1 1.9 3 0 0 3 3 3 0 ATP1G1/PLM/MAT8 family DUF5392 PF17370.2 CTQ29154.1 - 0.065 13.3 1.3 0.079 13.0 1.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5392) Gram_pos_anchor PF00746.21 CTQ29154.1 - 8.8 6.4 7.9 9 6.4 0.9 3.0 3 0 0 3 3 3 0 LPXTG cell wall anchor motif Oxidored_q3 PF00499.20 CTQ29155.1 - 1.3e-33 115.8 18.1 1.6e-33 115.4 18.1 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF2109 PF09882.9 CTQ29155.1 - 0.0081 16.2 7.0 0.022 14.8 7.0 1.8 1 1 0 1 1 1 1 Predicted membrane protein (DUF2109) Frizzled PF01534.17 CTQ29155.1 - 0.046 12.8 2.4 0.047 12.7 1.6 1.3 1 1 0 1 1 1 0 Frizzled/Smoothened family membrane region PIRT PF15099.6 CTQ29155.1 - 0.53 9.9 5.3 9.6 5.8 1.5 2.4 1 1 1 2 2 2 0 Phosphoinositide-interacting protein family DUF2070 PF09843.9 CTQ29155.1 - 2.3 6.4 11.2 2.7 6.2 11.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ABC2_membrane_3 PF12698.7 CTQ29155.1 - 4.4 6.3 18.5 5.8 5.9 18.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF3810 PF12725.7 CTQ29155.1 - 9.1 5.5 6.0 5.9 6.1 4.3 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3810) Fer4 PF00037.27 CTQ29156.1 - 5.5e-14 51.3 16.9 7e-09 35.1 0.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 CTQ29156.1 - 2.4e-11 44.0 10.6 4e-11 43.3 10.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 CTQ29156.1 - 1.8e-10 41.6 5.7 0.00013 22.8 0.0 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 CTQ29156.1 - 1e-09 38.4 8.8 0.00016 21.7 4.7 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ29156.1 - 2.1e-09 37.7 1.1 0.0013 19.2 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ29156.1 - 4e-09 36.5 19.4 9e-06 25.7 12.9 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ29156.1 - 5.4e-08 32.9 9.4 3.4e-07 30.3 10.3 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 CTQ29156.1 - 1.2e-07 32.2 4.5 0.0051 17.3 0.6 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 CTQ29156.1 - 7.4e-06 25.8 12.7 0.01 15.8 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 CTQ29156.1 - 5.3e-05 23.1 17.3 0.0046 17.0 0.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 CTQ29156.1 - 0.00069 19.9 13.0 0.068 13.7 1.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 CTQ29156.1 - 0.003 17.7 4.0 0.54 10.5 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 CTQ29156.1 - 0.0087 16.9 3.6 0.0087 16.9 3.6 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_13 PF13370.6 CTQ29156.1 - 0.064 13.8 12.2 0.53 10.9 1.4 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 CTQ29156.1 - 0.066 13.3 5.3 1.2 9.3 0.2 2.2 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_22 PF17179.4 CTQ29156.1 - 1.4 9.8 14.9 3.1 8.7 2.2 2.2 1 1 0 2 2 2 0 4Fe-4S dicluster domain c-SKI_SMAD_bind PF08782.10 CTQ29156.1 - 2.4 8.5 5.3 2.7 8.3 0.9 2.2 2 0 0 2 2 2 0 c-SKI Smad4 binding domain NADHdh PF00146.21 CTQ29157.1 - 1.3e-120 402.3 18.6 1.5e-120 402.1 18.6 1.0 1 0 0 1 1 1 1 NADH dehydrogenase NADH-G_4Fe-4S_3 PF10588.9 CTQ29158.1 - 5e-15 54.7 0.2 1.2e-14 53.6 0.2 1.7 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer2_4 PF13510.6 CTQ29158.1 - 2.8e-12 46.5 0.2 2.4e-11 43.5 0.1 2.7 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Molybdop_Fe4S4 PF04879.16 CTQ29158.1 - 3.5e-11 42.9 0.1 9.9e-11 41.5 0.1 1.9 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Molybdopterin PF00384.22 CTQ29158.1 - 6.6e-11 41.8 0.0 1.2e-08 34.4 0.0 2.2 2 0 0 2 2 2 2 Molybdopterin oxidoreductase Fer2 PF00111.27 CTQ29158.1 - 3.1e-09 36.7 1.5 5.6e-09 35.8 0.2 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Molydop_binding PF01568.21 CTQ29158.1 - 3.7e-06 26.9 0.0 1.2e-05 25.2 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain TPP_enzyme_M PF00205.22 CTQ29158.1 - 0.03 14.1 4.9 0.092 12.5 2.5 2.6 2 1 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain Fer4_6 PF12837.7 CTQ29158.1 - 2.8 8.2 9.5 0.25 11.5 0.6 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4 PF00037.27 CTQ29158.1 - 7.6 6.5 9.6 1.5 8.8 0.5 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain Complex1_51K PF01512.17 CTQ29159.1 - 1.1e-50 171.5 0.0 1.5e-50 171.0 0.0 1.2 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.9 CTQ29159.1 - 1.5e-26 92.2 0.0 2.8e-26 91.4 0.0 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SLBB PF10531.9 CTQ29159.1 - 2.5e-07 30.4 0.1 5.8e-07 29.3 0.1 1.6 1 0 0 1 1 1 1 SLBB domain 2Fe-2S_thioredx PF01257.19 CTQ29160.1 - 2.7e-50 170.0 0.0 3.2e-50 169.8 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin Complex1_49kDa PF00346.19 CTQ29161.1 - 1.2e-102 342.7 0.0 1.5e-102 342.3 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 CTQ29161.1 - 7.9e-41 139.5 0.1 1.9e-40 138.3 0.1 1.7 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Oxidored_q6 PF01058.22 CTQ29162.1 - 2.8e-22 79.0 0.2 3.9e-22 78.5 0.2 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Oxidored_q4 PF00507.19 CTQ29163.1 - 2.3e-31 107.9 0.5 2.3e-31 107.9 0.5 1.5 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Phage_holin_3_6 PF07332.11 CTQ29163.1 - 0.027 14.5 8.3 0.48 10.5 0.0 2.1 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III K_trans PF02705.16 CTQ29163.1 - 0.094 11.2 1.8 0.15 10.5 1.8 1.3 1 0 0 1 1 1 0 K+ potassium transporter LysR_substrate PF03466.20 CTQ29165.1 - 7.5e-28 97.3 0.3 1.3e-27 96.5 0.3 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29165.1 - 4.8e-18 64.9 1.7 8.6e-18 64.0 1.7 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Aminotran_1_2 PF00155.21 CTQ29166.1 - 8.8e-47 160.0 0.0 9.8e-47 159.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 CTQ29166.1 - 3.6e-06 26.5 0.0 5.5e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 CTQ29166.1 - 0.00059 18.9 0.0 0.00097 18.2 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 CTQ29166.1 - 0.011 15.1 0.0 0.016 14.5 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase Aminotran_MocR PF12897.7 CTQ29166.1 - 0.02 13.7 0.0 0.029 13.2 0.0 1.2 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Cys_Met_Meta_PP PF01053.20 CTQ29166.1 - 0.065 11.7 0.0 0.098 11.2 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme HD_2 PF12917.7 CTQ29167.1 - 7.4e-77 257.2 0.8 8.4e-77 257.0 0.8 1.0 1 0 0 1 1 1 1 HD containing hydrolase-like enzyme HD_3 PF13023.6 CTQ29167.1 - 2.8e-17 63.1 0.3 3.4e-17 62.9 0.3 1.1 1 0 0 1 1 1 1 HD domain HD PF01966.22 CTQ29167.1 - 7.9e-09 35.8 0.3 1.1e-08 35.3 0.3 1.2 1 0 0 1 1 1 1 HD domain HDOD PF08668.12 CTQ29167.1 - 0.043 13.3 0.0 0.057 12.9 0.0 1.3 1 0 0 1 1 1 0 HDOD domain CAS_C PF12026.8 CTQ29167.1 - 0.052 13.6 0.1 0.071 13.2 0.1 1.2 1 0 0 1 1 1 0 Crk-Associated Substrate C-terminal domain CitMHS PF03600.16 CTQ29168.1 - 1.4e-58 198.5 44.2 1.2e-37 129.7 11.7 2.1 2 0 0 2 2 2 2 Citrate transporter TrkA_C PF02080.21 CTQ29168.1 - 2.5e-25 88.1 0.8 1.2e-11 44.3 0.1 2.3 2 0 0 2 2 2 2 TrkA-C domain Na_sulph_symp PF00939.19 CTQ29168.1 - 4.9e-22 78.6 47.6 9e-12 44.8 17.2 3.6 2 2 1 3 3 3 3 Sodium:sulfate symporter transmembrane region DctM PF06808.12 CTQ29168.1 - 2.3e-11 43.2 46.5 5e-09 35.5 19.4 2.8 2 1 0 2 2 2 2 Tripartite ATP-independent periplasmic transporter, DctM component HAD_2 PF13419.6 CTQ29169.1 - 5.9e-25 88.4 0.0 7.2e-25 88.1 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ29169.1 - 8.3e-17 62.2 0.0 1.7e-11 44.8 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ29169.1 - 1.2e-08 35.6 0.0 1.4e-08 35.3 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ29169.1 - 1e-05 25.5 0.0 3.4e-05 23.8 0.0 1.9 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 CTQ29169.1 - 0.00022 21.3 0.1 0.0011 19.1 0.1 2.2 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase YfbU PF03887.14 CTQ29170.1 - 2.4e-70 235.9 1.4 2.7e-70 235.7 1.4 1.0 1 0 0 1 1 1 1 YfbU domain WASH-7_mid PF14744.6 CTQ29170.1 - 0.093 11.8 0.3 0.17 11.0 0.3 1.3 1 0 0 1 1 1 0 WASH complex subunit 7 DUF412 PF04217.13 CTQ29171.1 - 1.6e-57 193.3 0.1 1.8e-57 193.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF412 Acetate_kinase PF00871.17 CTQ29172.1 - 1.3e-176 587.1 0.1 1.5e-176 586.9 0.1 1.0 1 0 0 1 1 1 1 Acetokinase family BcrAD_BadFG PF01869.20 CTQ29172.1 - 0.054 13.0 0.1 0.089 12.3 0.1 1.5 1 1 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family PTA_PTB PF01515.19 CTQ29173.1 - 3.8e-128 427.3 0.3 6.8e-128 426.5 0.3 1.4 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase AAA_26 PF13500.6 CTQ29173.1 - 2.5e-50 171.0 0.3 4.9e-50 170.1 0.3 1.5 1 0 0 1 1 1 1 AAA domain DRTGG PF07085.12 CTQ29173.1 - 2.2e-30 104.6 0.1 1.1e-29 102.3 0.0 2.2 2 0 0 2 2 2 1 DRTGG domain LPD7 PF18821.1 CTQ29173.1 - 0.055 13.6 0.0 21 5.3 0.0 3.4 3 0 0 3 3 3 0 Large polyvalent protein-associated domain 7 NUDIX PF00293.28 CTQ29174.1 - 2.7e-18 66.3 0.1 4.2e-18 65.7 0.1 1.3 1 0 0 1 1 1 1 NUDIX domain ATP_bind_2 PF03668.15 CTQ29174.1 - 0.14 11.4 0.1 0.18 11.1 0.1 1.1 1 0 0 1 1 1 0 P-loop ATPase protein family Metallophos_2 PF12850.7 CTQ29175.1 - 1.8e-24 86.8 0.0 2.4e-24 86.4 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 CTQ29175.1 - 5.5e-11 43.4 0.0 1e-10 42.5 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase NFACT-C PF11923.8 CTQ29175.1 - 0.21 11.5 0.0 0.33 10.9 0.0 1.3 1 0 0 1 1 1 0 NFACT protein C-terminal domain GST_C_4 PF14834.6 CTQ29176.1 - 5.4e-70 233.2 1.3 7.3e-70 232.7 1.3 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 CTQ29176.1 - 6.6e-11 42.5 0.0 1.2e-10 41.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 CTQ29176.1 - 4.1e-10 39.9 0.0 7.2e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ29176.1 - 2e-08 34.4 0.0 3.2e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 CTQ29176.1 - 0.016 15.9 0.0 0.044 14.5 0.0 1.8 1 1 0 1 1 1 0 Glutathione S-transferase N-terminal domain GST_N PF02798.20 CTQ29177.1 - 2.9e-13 49.9 0.0 5e-13 49.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 CTQ29177.1 - 6.4e-11 42.1 0.1 1.4e-10 41.1 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 CTQ29177.1 - 9.6e-11 42.0 0.0 1.7e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 CTQ29177.1 - 1e-10 41.6 0.0 1.6e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 CTQ29177.1 - 2.4e-09 37.4 0.0 4.4e-09 36.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 CTQ29177.1 - 8.1e-07 29.2 0.0 1.3e-06 28.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain FolB PF02152.18 CTQ29178.1 - 1.2e-24 87.0 0.5 1.3e-24 86.8 0.5 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase HTH_19 PF12844.7 CTQ29178.1 - 0.11 12.5 0.3 0.35 10.9 0.3 1.8 1 1 0 1 1 1 0 Helix-turn-helix domain Epimerase PF01370.21 CTQ29179.1 - 9.1e-22 77.7 0.0 1.2e-21 77.2 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1731 PF08338.11 CTQ29179.1 - 1e-18 66.8 0.2 2.7e-18 65.5 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1731) GDP_Man_Dehyd PF16363.5 CTQ29179.1 - 8.5e-08 32.0 0.0 9.4e-06 25.2 0.0 2.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 CTQ29179.1 - 1.2e-05 25.3 0.0 1.8e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 CTQ29179.1 - 0.0002 20.6 0.0 0.0011 18.3 0.0 2.0 2 0 0 2 2 2 1 Male sterility protein NmrA PF05368.13 CTQ29179.1 - 0.0033 17.0 0.0 0.0049 16.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 CTQ29179.1 - 0.0064 15.6 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 CTQ29179.1 - 0.051 12.7 0.0 3.5 6.7 0.0 2.1 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein F420_oxidored PF03807.17 CTQ29179.1 - 0.064 13.8 0.0 0.14 12.8 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent adh_short PF00106.25 CTQ29179.1 - 0.17 11.3 0.0 0.43 10.0 0.0 1.6 2 0 0 2 2 2 0 short chain dehydrogenase 3Beta_HSD PF01073.19 CTQ29179.1 - 0.19 10.7 0.0 0.28 10.2 0.0 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Glyco_trans_4_4 PF13579.6 CTQ29179.1 - 0.22 12.0 4.7 0.059 13.8 1.4 1.7 2 1 0 2 2 2 0 Glycosyl transferase 4-like domain NAD_binding_2 PF03446.15 CTQ29179.1 - 0.24 11.6 0.0 0.47 10.6 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Acetyltransf_3 PF13302.7 CTQ29180.1 - 1.1e-24 87.6 0.0 1.4e-24 87.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ29180.1 - 9e-09 35.6 0.0 1.1e-08 35.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 CTQ29180.1 - 0.0017 18.0 0.0 0.0035 17.0 0.0 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ29180.1 - 0.0017 18.7 0.0 0.0025 18.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ29180.1 - 0.021 14.9 0.0 0.027 14.6 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ29180.1 - 0.04 13.9 0.0 0.062 13.3 0.0 1.2 1 0 0 1 1 1 0 FR47-like protein ABC_tran PF00005.27 CTQ29181.1 - 2.3e-33 115.6 0.1 3.3e-33 115.1 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ29181.1 - 4.6e-12 46.4 0.6 3.3e-06 27.2 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ29181.1 - 6.5e-08 32.3 0.4 2e-07 30.7 0.4 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 CTQ29181.1 - 0.00035 20.4 0.0 0.016 14.9 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 CTQ29181.1 - 0.00058 19.5 0.1 0.0011 18.7 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 CTQ29181.1 - 0.0029 16.5 0.1 0.74 8.5 0.0 2.4 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_13 PF13166.6 CTQ29181.1 - 0.0031 16.2 0.0 0.37 9.4 0.0 2.0 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 CTQ29181.1 - 0.0079 16.6 0.2 0.015 15.7 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 CTQ29181.1 - 0.0091 16.2 0.0 0.036 14.2 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 CTQ29181.1 - 0.013 16.0 0.1 0.026 15.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 CTQ29181.1 - 0.018 14.2 0.0 0.02 14.1 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit PRK PF00485.18 CTQ29181.1 - 0.025 14.3 0.0 0.041 13.6 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family RsgA_GTPase PF03193.16 CTQ29181.1 - 0.057 13.3 0.1 0.12 12.3 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_24 PF13479.6 CTQ29181.1 - 0.086 12.5 0.0 0.2 11.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 CTQ29181.1 - 0.098 12.6 0.0 0.38 10.7 0.0 2.0 3 0 0 3 3 3 0 NACHT domain AAA_22 PF13401.6 CTQ29181.1 - 0.14 12.4 0.5 0.73 10.1 0.1 2.0 2 1 0 2 2 2 0 AAA domain DUF87 PF01935.17 CTQ29181.1 - 0.18 11.8 0.7 0.47 10.5 0.7 1.8 1 1 0 1 1 1 0 Helicase HerA, central domain BPD_transp_1 PF00528.22 CTQ29182.1 - 1.4e-13 50.9 15.1 2e-13 50.5 15.1 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Stevor PF17410.2 CTQ29182.1 - 0.29 10.7 4.3 0.036 13.6 0.5 1.6 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame FtsX PF02687.21 CTQ29182.1 - 2.9 8.4 12.3 0.64 10.5 0.9 2.5 2 0 0 2 2 2 0 FtsX-like permease family BPD_transp_1 PF00528.22 CTQ29183.1 - 2.4e-23 82.9 11.6 2.9e-23 82.5 11.6 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component MFS_Mycoplasma PF07672.13 CTQ29183.1 - 0.12 11.6 0.0 0.12 11.6 0.0 2.5 2 2 0 3 3 3 0 Mycoplasma MFS transporter DUF872 PF05915.12 CTQ29183.1 - 3.5 7.8 7.1 0.68 10.1 0.1 2.4 1 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) SBP_bac_3 PF00497.20 CTQ29184.1 - 7.6e-64 215.2 0.1 8.7e-64 215.0 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ29184.1 - 3.6e-05 23.9 0.1 0.002 18.3 0.1 2.3 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 CTQ29184.1 - 0.00055 19.9 0.0 0.007 16.3 0.0 2.0 1 1 1 2 2 2 1 NMT1/THI5 like YhfZ_C PF14503.6 CTQ29184.1 - 0.17 11.4 0.0 3.5 7.1 0.0 2.0 1 1 1 2 2 2 0 YhfZ C-terminal domain SBP_bac_3 PF00497.20 CTQ29185.1 - 2.1e-61 207.2 0.4 2.4e-61 207.0 0.4 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ29185.1 - 0.00059 20.0 0.0 0.011 15.9 0.0 2.4 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 CTQ29185.1 - 0.00065 19.7 0.0 0.019 14.9 0.0 2.1 1 1 0 2 2 2 1 NMT1/THI5 like Flavoprotein PF02441.19 CTQ29186.1 - 7.5e-24 84.3 0.0 9.6e-24 83.9 0.0 1.1 1 0 0 1 1 1 1 Flavoprotein CTP_transf_like PF01467.26 CTQ29186.1 - 0.047 13.9 0.0 0.1 12.8 0.0 1.6 1 0 0 1 1 1 0 Cytidylyltransferase-like DUF3018 PF11455.8 CTQ29186.1 - 0.094 12.7 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3018) Semialdhyde_dh PF01118.24 CTQ29186.1 - 0.14 12.6 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain GATase_6 PF13522.6 CTQ29187.1 - 6.3e-16 58.8 0.0 1.5e-15 57.6 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 CTQ29187.1 - 3.6e-14 52.7 0.0 7.7e-14 51.7 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 CTQ29187.1 - 3.8e-08 33.0 0.0 7.4e-08 32.1 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.6 CTQ29187.1 - 1.9e-05 23.7 0.0 9.1e-05 21.5 0.0 1.9 2 0 0 2 2 2 1 Glutamine amidotransferases class-II PRTase_2 PF15609.6 CTQ29187.1 - 0.16 11.4 0.0 0.33 10.4 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosyl transferase Colicin_V PF02674.16 CTQ29188.1 - 3.3e-38 130.9 9.0 3.9e-38 130.7 9.0 1.0 1 0 0 1 1 1 1 Colicin V production protein Phage_holin_4_1 PF05105.12 CTQ29188.1 - 0.11 12.6 4.6 1.3 9.2 0.2 2.6 2 1 1 3 3 3 0 Bacteriophage holin family Rick_17kDa_Anti PF05433.15 CTQ29188.1 - 0.22 11.4 1.8 0.35 10.8 1.8 1.4 1 0 0 1 1 1 0 Glycine zipper 2TM domain DUF1218 PF06749.12 CTQ29188.1 - 0.31 11.6 4.3 0.86 10.2 4.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1218) SPC25 PF06703.11 CTQ29188.1 - 9.2 6.0 6.8 15 5.4 2.8 2.5 1 1 1 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) SPOR PF05036.13 CTQ29189.1 - 3.2e-10 40.2 0.0 4.8e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 Sporulation related domain Mur_ligase_M PF08245.12 CTQ29190.1 - 4.5e-10 39.8 0.0 7.5e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 CTQ29190.1 - 4.8e-08 33.1 0.0 1.1e-07 32.0 0.0 1.6 1 0 0 1 1 1 1 Mur ligase family, glutamate ligase domain Carboxyl_trans PF01039.22 CTQ29191.1 - 8.9e-17 60.9 0.1 1.7e-16 60.0 0.1 1.5 1 1 0 1 1 1 1 Carboxyl transferase domain zf-ACC PF17848.1 CTQ29191.1 - 9.8e-15 54.3 3.2 1.7e-14 53.6 3.2 1.4 1 0 0 1 1 1 1 Acetyl-coA carboxylase zinc finger domain zf-ribbon_3 PF13248.6 CTQ29191.1 - 0.034 13.6 0.4 3.7 7.1 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.7 CTQ29191.1 - 0.089 12.8 0.4 0.18 11.9 0.4 1.4 1 0 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 CTQ29191.1 - 0.12 12.5 1.2 0.32 11.1 1.2 1.7 1 0 0 1 1 1 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 CTQ29191.1 - 0.13 12.2 1.3 0.28 11.1 1.3 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Ogr_Delta PF04606.12 CTQ29191.1 - 0.15 12.1 0.1 0.35 10.9 0.1 1.6 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger zf-FPG_IleRS PF06827.14 CTQ29191.1 - 0.21 11.5 1.0 0.52 10.2 1.0 1.6 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS Auto_anti-p27 PF06677.12 CTQ29191.1 - 1 9.6 4.1 0.29 11.3 0.8 1.8 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) SNARE_assoc PF09335.11 CTQ29193.1 - 3.3e-26 92.1 3.6 3.3e-26 92.1 3.6 2.1 3 0 0 3 3 3 1 SNARE associated Golgi protein CTP_transf_1 PF01148.20 CTQ29193.1 - 0.023 14.5 6.7 0.044 13.5 1.9 2.1 2 0 0 2 2 2 0 Cytidylyltransferase family DUF2929 PF11151.8 CTQ29193.1 - 0.55 10.6 6.6 4.3 7.7 0.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2929) Doppel PF11466.8 CTQ29193.1 - 0.71 9.6 4.2 1 9.1 0.3 2.8 3 0 0 3 3 3 0 Prion-like protein Doppel PseudoU_synth_1 PF01416.20 CTQ29194.1 - 1.1e-40 138.4 0.2 1.4e-28 99.5 0.0 2.1 2 0 0 2 2 2 2 tRNA pseudouridine synthase Semialdhyde_dhC PF02774.18 CTQ29195.1 - 1.5e-37 129.4 0.0 2e-37 129.1 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 CTQ29195.1 - 6.7e-25 87.9 0.0 1.6e-24 86.7 0.0 1.6 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DXP_reductoisom PF02670.16 CTQ29195.1 - 0.0028 18.4 0.0 0.0047 17.6 0.0 1.3 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase NmrA PF05368.13 CTQ29195.1 - 0.0071 15.9 0.1 0.011 15.3 0.1 1.3 1 0 0 1 1 1 1 NmrA-like family F420_oxidored PF03807.17 CTQ29195.1 - 0.017 15.7 0.2 0.04 14.5 0.2 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_4 PF07993.12 CTQ29195.1 - 0.033 13.4 0.0 0.049 12.8 0.0 1.2 1 0 0 1 1 1 0 Male sterility protein RmlD_sub_bind PF04321.17 CTQ29195.1 - 0.034 13.3 0.1 0.048 12.7 0.1 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain Epimerase PF01370.21 CTQ29195.1 - 0.084 12.3 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 CTQ29195.1 - 0.1 12.4 0.2 0.18 11.7 0.2 1.4 1 0 0 1 1 1 0 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 CTQ29195.1 - 0.16 12.2 0.1 0.33 11.2 0.1 1.6 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 CTQ29196.1 - 4.2e-31 107.7 0.0 7.1e-31 106.9 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF3410 PF11890.8 CTQ29196.1 - 8.9e-29 99.1 0.0 1.4e-28 98.4 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3410) 2-Hacid_dh PF00389.30 CTQ29196.1 - 1.9e-18 66.4 0.0 2.7e-18 65.9 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 CTQ29196.1 - 0.034 14.3 0.0 0.1 12.8 0.0 1.8 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Sulf_transp PF04143.14 CTQ29197.1 - 0.38 10.3 2.6 0.53 9.8 2.6 1.3 1 0 0 1 1 1 0 Sulphur transport NifQ PF04891.12 CTQ29197.1 - 1.1 9.6 4.4 6 7.2 2.0 2.9 2 1 1 3 3 3 0 NifQ MFS_1 PF07690.16 CTQ29198.1 - 2.5e-31 108.9 64.6 1.8e-15 56.8 30.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ29198.1 - 4.5e-06 25.8 16.7 0.00063 18.7 9.3 2.3 2 0 0 2 2 2 2 MFS_1 like family ketoacyl-synt PF00109.26 CTQ29199.1 - 1.3e-39 136.3 2.7 2e-39 135.7 2.7 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 CTQ29199.1 - 9.6e-30 103.0 1.2 2.7e-29 101.6 0.4 2.1 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 CTQ29199.1 - 0.00014 22.3 0.0 0.00024 21.5 0.0 1.4 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension Thiolase_N PF00108.23 CTQ29199.1 - 0.0004 19.8 0.1 0.00077 18.9 0.1 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain Methyltransf_30 PF05430.11 CTQ29200.1 - 3e-49 166.0 0.0 4.7e-49 165.4 0.0 1.3 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase DAO PF01266.24 CTQ29200.1 - 4.3e-49 168.0 2.0 4.3e-49 168.0 2.0 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CTQ29200.1 - 0.05 13.8 0.9 0.38 11.0 0.1 2.9 4 0 0 4 4 4 0 NAD(P)-binding Rossmann-like domain YfcL PF08891.11 CTQ29201.1 - 7e-37 125.6 0.1 7.9e-37 125.5 0.1 1.0 1 0 0 1 1 1 1 YfcL protein EpmC PF04315.12 CTQ29202.1 - 2.2e-80 268.1 0.1 2.6e-80 267.9 0.1 1.0 1 0 0 1 1 1 1 Elongation factor P hydroxylase TauE PF01925.19 CTQ29203.1 - 6.8e-43 147.0 30.2 8.2e-43 146.7 30.2 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Peptidase_M74 PF03411.13 CTQ29204.1 - 2.1e-95 318.8 0.0 2.5e-95 318.6 0.0 1.0 1 0 0 1 1 1 1 Penicillin-insensitive murein endopeptidase Chorismate_synt PF01264.21 CTQ29205.1 - 1e-141 471.4 0.0 1.2e-141 471.2 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase MTS PF05175.14 CTQ29206.1 - 2.4e-17 63.0 0.0 3.1e-16 59.4 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 CTQ29206.1 - 1.5e-13 50.8 0.0 2.6e-13 50.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CTQ29206.1 - 7.2e-10 39.4 0.0 1.6e-09 38.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 CTQ29206.1 - 8.5e-08 31.9 0.0 1.2e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 CTQ29206.1 - 1.4e-07 31.2 0.0 2.2e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 CTQ29206.1 - 1e-05 25.3 0.0 1.8e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Met_10 PF02475.16 CTQ29206.1 - 0.00012 21.9 0.0 0.00019 21.2 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein UPF0020 PF01170.18 CTQ29206.1 - 0.00025 20.8 0.4 0.00093 18.9 0.4 1.8 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Ubie_methyltran PF01209.18 CTQ29206.1 - 0.00039 19.8 0.0 0.00063 19.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 CTQ29206.1 - 0.0004 20.3 0.0 0.00073 19.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ29206.1 - 0.00043 21.0 0.0 0.0023 18.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ29206.1 - 0.0023 17.8 0.0 0.0073 16.2 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ29206.1 - 0.0037 17.9 0.0 0.011 16.3 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 CTQ29206.1 - 0.0063 15.8 0.0 0.01 15.2 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain N6_Mtase PF02384.16 CTQ29206.1 - 0.034 13.4 0.0 0.069 12.4 0.0 1.5 1 1 0 1 1 1 0 N-6 DNA Methylase Methyltransf_24 PF13578.6 CTQ29206.1 - 0.038 15.0 0.1 0.2 12.7 0.0 2.1 3 0 0 3 3 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 CTQ29206.1 - 0.043 13.6 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Rsm22 PF09243.10 CTQ29206.1 - 0.049 12.9 0.0 0.082 12.2 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 Methyltransf_10 PF05971.12 CTQ29206.1 - 0.074 12.4 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 RNA methyltransferase PrmC_N PF17827.1 CTQ29206.1 - 0.087 13.4 0.2 0.69 10.5 0.2 2.4 1 1 0 1 1 1 0 PrmC N-terminal domain Methyltransf_4 PF02390.17 CTQ29206.1 - 0.21 11.1 0.0 0.48 9.9 0.0 1.6 1 0 0 1 1 1 0 Putative methyltransferase Smr PF01713.21 CTQ29207.1 - 2e-17 63.3 0.1 3.5e-17 62.5 0.1 1.4 1 0 0 1 1 1 1 Smr domain His_Phos_1 PF00300.22 CTQ29208.1 - 4e-08 33.2 0.0 7.8e-07 29.0 0.0 2.0 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) 3HCDH_N PF02737.18 CTQ29209.1 - 2.1e-57 193.9 0.0 3.7e-57 193.1 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 CTQ29209.1 - 9.9e-43 146.3 0.1 1.9e-42 145.3 0.1 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 CTQ29209.1 - 7.2e-35 119.5 0.0 1.1e-25 90.0 0.0 2.7 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 CTQ29209.1 - 6.6e-28 98.2 0.0 6.6e-28 98.2 0.0 1.8 2 0 0 2 2 2 1 Enoyl-CoA hydratase/isomerase Thiolase_N PF00108.23 CTQ29210.1 - 7.5e-60 202.5 0.3 1.1e-59 202.0 0.3 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 CTQ29210.1 - 8.1e-37 125.6 0.5 2.3e-36 124.2 0.1 1.9 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 CTQ29210.1 - 0.00069 19.3 6.3 0.0024 17.5 1.9 3.1 3 1 0 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain DUF406 PF04175.12 CTQ29211.1 - 2.5e-37 127.2 0.7 2.8e-37 127.1 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF406) Toluene_X PF03349.16 CTQ29212.1 - 1.7e-147 491.5 13.9 1.9e-147 491.3 13.9 1.0 1 0 0 1 1 1 1 Outer membrane protein transport protein (OMPP1/FadL/TodX) YadA_anchor PF03895.15 CTQ29212.1 - 0.0022 18.1 9.8 0.16 12.1 0.0 5.2 4 2 1 5 5 5 1 YadA-like membrane anchor domain DUF2490 PF10677.9 CTQ29212.1 - 0.014 15.4 5.6 3 7.7 2.7 4.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2490) Glycoamylase PF10091.9 CTQ29212.1 - 0.025 14.2 0.9 0.057 13.0 0.1 2.1 2 1 1 3 3 3 0 Putative glucoamylase MlaA PF04333.13 CTQ29213.1 - 2.5e-67 226.4 0.0 3.2e-67 226.0 0.0 1.0 1 0 0 1 1 1 1 MlaA lipoprotein Form_Nir_trans PF01226.17 CTQ29214.1 - 1.4e-41 142.4 15.9 1.6e-41 142.2 15.9 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter Cupin_2 PF07883.11 CTQ29215.1 - 0.00014 21.5 0.1 0.00029 20.5 0.1 1.6 1 1 0 1 1 1 1 Cupin domain FdtA PF05523.11 CTQ29215.1 - 0.11 12.2 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 WxcM-like, C-terminal LysR_substrate PF03466.20 CTQ29217.1 - 4e-48 163.6 6.4 6.4e-48 162.9 6.4 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29217.1 - 1.9e-25 88.6 2.8 2.4e-25 88.2 0.7 2.3 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ29217.1 - 0.00063 19.5 1.4 0.0013 18.4 0.1 2.1 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain HTH_5 PF01022.20 CTQ29217.1 - 0.03 14.2 0.0 0.063 13.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family dCMP_cyt_deam_1 PF00383.23 CTQ29218.1 - 5.7e-20 71.1 0.0 7.5e-20 70.7 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 CTQ29218.1 - 8.9e-16 57.9 0.0 1e-15 57.7 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC_N PF08210.11 CTQ29218.1 - 0.031 14.2 0.0 0.032 14.1 0.0 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain SNAD4 PF18750.1 CTQ29218.1 - 0.082 13.0 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC3 PF18771.1 CTQ29218.1 - 0.16 12.1 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 APOBEC3 Bd3614-deam PF14439.6 CTQ29218.1 - 0.57 10.3 2.1 13 5.9 2.2 2.2 1 1 0 1 1 1 0 Bd3614-like deaminase MFS_1 PF07690.16 CTQ29219.1 - 8.9e-28 97.2 57.4 1.1e-26 93.6 43.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ29219.1 - 1.8e-09 37.0 23.0 1.4e-05 24.2 8.7 2.1 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_4 PF06779.14 CTQ29219.1 - 8.5e-09 35.2 32.6 2.6e-08 33.6 32.6 1.9 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 CTQ29219.1 - 2.5e-07 29.6 13.9 1.3e-05 24.0 3.1 2.4 2 1 0 2 2 2 2 MFS/sugar transport protein Peptidase_M48_N PF16491.5 CTQ29219.1 - 2.6 7.9 4.6 35 4.2 0.1 3.3 3 0 0 3 3 3 0 CAAX prenyl protease N-terminal, five membrane helices Aminotran_1_2 PF00155.21 CTQ29221.1 - 6.2e-59 200.0 0.0 7.6e-59 199.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 CTQ29221.1 - 0.0055 16.0 0.0 0.009 15.3 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 CTQ29221.1 - 0.056 12.0 0.0 0.082 11.4 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.13 CTQ29221.1 - 0.079 11.8 0.0 0.83 8.5 0.0 2.0 2 0 0 2 2 2 0 Allinase 5TM-5TMR_LYT PF07694.12 CTQ29222.1 - 4.2e-43 146.8 14.9 7e-43 146.0 14.9 1.4 1 0 0 1 1 1 1 5TMR of 5TMR-LYT His_kinase PF06580.13 CTQ29222.1 - 1.6e-24 86.1 1.1 4e-24 84.7 1.1 1.7 1 0 0 1 1 1 1 Histidine kinase ECF-ribofla_trS PF07155.12 CTQ29222.1 - 5.2e-08 33.1 14.0 1.6e-07 31.5 14.2 1.7 1 1 0 1 1 1 1 ECF-type riboflavin transporter, S component HATPase_c PF02518.26 CTQ29222.1 - 1.6e-06 28.6 0.0 3.5e-06 27.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.6 CTQ29222.1 - 4.7e-05 23.7 0.0 0.00029 21.1 0.0 2.1 2 0 0 2 2 2 1 GAF domain ECF_trnsprt PF12822.7 CTQ29222.1 - 0.00018 21.7 15.3 0.00066 19.8 15.4 1.8 1 1 0 1 1 1 1 ECF transporter, substrate-specific component GAF PF01590.26 CTQ29222.1 - 0.00067 20.3 1.3 0.0017 19.0 0.0 2.3 3 0 0 3 3 3 1 GAF domain HATPase_c_2 PF13581.6 CTQ29222.1 - 0.02 14.9 0.0 0.037 14.0 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF1269 PF06897.12 CTQ29222.1 - 0.37 11.1 2.7 2 8.7 0.8 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) DUF3792 PF12670.7 CTQ29222.1 - 0.49 10.6 15.7 0.13 12.4 3.9 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3792) LytTR PF04397.15 CTQ29223.1 - 2.3e-31 107.9 0.9 4e-31 107.1 0.4 1.7 2 0 0 2 2 2 1 LytTr DNA-binding domain Response_reg PF00072.24 CTQ29223.1 - 1e-23 83.6 0.1 1.7e-23 82.9 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Glucokinase PF02685.16 CTQ29224.1 - 1.6e-121 405.2 0.0 1.8e-121 405.0 0.0 1.0 1 0 0 1 1 1 1 Glucokinase PaaX_C PF08223.11 CTQ29224.1 - 0.027 14.8 0.0 0.043 14.1 0.0 1.3 1 0 0 1 1 1 0 PaaX-like protein C-terminal domain Voltage_CLC PF00654.20 CTQ29226.1 - 5.9e-20 71.8 36.8 5.9e-20 71.8 36.8 2.1 1 1 1 2 2 2 2 Voltage gated chloride channel TPP_enzyme_N PF02776.18 CTQ29227.1 - 2.6e-33 115.1 0.4 1.1e-32 113.0 0.1 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 CTQ29227.1 - 4.5e-19 68.7 0.0 1.8e-18 66.8 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 CTQ29227.1 - 2e-18 66.4 0.1 1.8e-17 63.4 0.0 2.3 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain Aldo_ket_red PF00248.21 CTQ29228.1 - 3e-67 226.9 0.0 3.4e-67 226.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF2502 PF10697.9 CTQ29229.1 - 2.2e-18 66.4 25.2 3.2e-18 65.8 25.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2502) Nramp PF01566.18 CTQ29230.1 - 3.8e-125 417.6 28.9 4.9e-125 417.2 28.9 1.1 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein AA_permease_C PF13906.6 CTQ29230.1 - 0.27 11.3 5.8 0.11 12.6 1.4 2.7 2 0 0 2 2 2 0 C-terminus of AA_permease Nucleos_tra2_C PF07662.13 CTQ29231.1 - 3.5e-62 209.9 14.9 3.5e-62 209.9 14.9 2.4 3 1 0 3 3 3 1 Na+ dependent nucleoside transporter C-terminus Nucleos_tra2_N PF01773.20 CTQ29231.1 - 6.5e-20 71.5 4.7 6.5e-20 71.5 4.7 4.0 3 1 0 3 3 3 1 Na+ dependent nucleoside transporter N-terminus Gate PF07670.14 CTQ29231.1 - 2e-06 28.0 8.1 2e-06 28.0 8.1 4.3 2 1 2 4 4 4 2 Nucleoside recognition EAL PF00563.20 CTQ29232.1 - 3.2e-56 190.5 0.1 4.9e-56 189.9 0.1 1.2 1 0 0 1 1 1 1 EAL domain MASE1 PF05231.14 CTQ29232.1 - 1.3e-18 67.2 19.8 2.2e-18 66.5 19.8 1.2 1 0 0 1 1 1 1 MASE1 GGDEF PF00990.21 CTQ29232.1 - 2.4e-06 27.4 0.0 4.3e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain MASE1 PF05231.14 CTQ29233.1 - 4.3e-09 35.9 13.3 5e-09 35.7 13.3 1.0 1 0 0 1 1 1 1 MASE1 DUF2070 PF09843.9 CTQ29233.1 - 3.4 5.9 11.3 4.1 5.6 11.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF1323 PF07037.11 CTQ29235.1 - 1.1e-50 171.1 0.0 1.3e-50 170.9 0.0 1.0 1 0 0 1 1 1 1 Putative transcription regulator (DUF1323) HTH_29 PF13551.6 CTQ29235.1 - 4.7e-05 23.3 0.0 8.8e-05 22.5 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.6 CTQ29235.1 - 8.5e-05 22.2 0.3 0.00028 20.6 0.0 1.9 2 0 0 2 2 2 1 Homeodomain-like domain HTH_Tnp_Mu_1 PF02316.16 CTQ29235.1 - 0.00014 22.0 0.5 0.00052 20.2 0.5 1.8 1 1 0 1 1 1 1 Mu DNA-binding domain HTH_17 PF12728.7 CTQ29235.1 - 0.00051 20.2 0.0 0.00085 19.5 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain Terminase_5 PF06056.12 CTQ29235.1 - 0.00065 19.5 0.0 0.001 18.9 0.0 1.3 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_3 PF01381.22 CTQ29235.1 - 0.00076 19.5 0.0 0.0013 18.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_28 PF13518.6 CTQ29235.1 - 0.0011 19.1 0.2 0.0028 17.7 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain DUF4224 PF13986.6 CTQ29235.1 - 0.0015 18.4 0.0 0.0039 17.0 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4224) HTH_38 PF13936.6 CTQ29235.1 - 0.0017 18.1 0.3 0.0085 15.8 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 CTQ29235.1 - 0.017 15.5 0.0 0.047 14.0 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ29235.1 - 0.024 14.6 0.1 0.084 12.9 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain ANT PF03374.14 CTQ29235.1 - 0.026 14.8 0.0 0.11 12.9 0.0 1.9 2 0 0 2 2 2 0 Phage antirepressor protein KilAC domain HTH_24 PF13412.6 CTQ29235.1 - 0.057 13.0 0.0 0.14 11.7 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Glycos_trans_3N PF02885.17 CTQ29235.1 - 0.18 11.6 0.1 6.5 6.7 0.0 2.2 2 0 0 2 2 2 0 Glycosyl transferase family, helical bundle domain HTH_Tnp_1_2 PF13022.6 CTQ29235.1 - 0.4 10.8 1.1 0.78 9.9 0.1 1.9 3 0 0 3 3 3 0 Helix-turn-helix of insertion element transposase DUF1323 PF07037.11 CTQ29236.1 - 4.5e-53 178.8 0.0 5e-53 178.6 0.0 1.0 1 0 0 1 1 1 1 Putative transcription regulator (DUF1323) HTH_17 PF12728.7 CTQ29236.1 - 7.7e-06 26.0 0.0 1.5e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ29236.1 - 5.3e-05 22.9 0.0 0.00012 21.8 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 CTQ29236.1 - 0.0008 19.4 0.4 0.0013 18.7 0.1 1.6 2 0 0 2 2 2 1 Winged helix-turn helix Crp PF00325.20 CTQ29236.1 - 0.002 17.7 0.0 0.0058 16.3 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, crp family HTH_Crp_2 PF13545.6 CTQ29236.1 - 0.0022 17.9 0.0 0.0048 16.8 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain YdaS_antitoxin PF15943.5 CTQ29236.1 - 0.0099 15.7 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT MarR_2 PF12802.7 CTQ29236.1 - 0.01 15.7 0.0 0.05 13.5 0.0 2.0 2 1 0 2 2 2 0 MarR family HTH_26 PF13443.6 CTQ29236.1 - 0.015 15.7 0.1 0.049 14.1 0.0 1.8 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Terminase_5 PF06056.12 CTQ29236.1 - 0.015 15.1 0.2 0.028 14.3 0.0 1.5 2 0 0 2 2 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_38 PF13936.6 CTQ29236.1 - 0.017 14.9 0.0 0.064 13.0 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.22 CTQ29236.1 - 0.017 15.2 0.0 0.029 14.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix Integrase_1 PF12835.7 CTQ29236.1 - 0.029 14.5 0.0 0.037 14.1 0.0 1.2 1 0 0 1 1 1 0 Integrase AbiEi_4 PF13338.6 CTQ29236.1 - 0.081 13.1 0.1 0.31 11.2 0.0 2.0 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin Phage_CI_repr PF07022.13 CTQ29236.1 - 0.088 12.9 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain HTH_20 PF12840.7 CTQ29236.1 - 0.093 12.8 0.1 0.4 10.8 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 CTQ29236.1 - 0.12 12.0 0.0 0.33 10.5 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding tRNA-synt_1c PF00749.21 CTQ29237.1 - 3.8e-121 403.8 0.0 5.6e-121 403.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain HTH_15 PF12324.8 CTQ29237.1 - 0.015 15.2 0.1 0.4 10.7 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase DUF3150 PF11348.8 CTQ29237.1 - 0.088 12.0 0.0 0.14 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) LysR_substrate PF03466.20 CTQ29239.1 - 1.6e-45 155.0 3.9 1.6e-45 155.0 3.9 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29239.1 - 1.4e-22 79.4 3.9 7.1e-22 77.1 1.8 2.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family SAM_1 PF00536.30 CTQ29240.1 - 0.0004 20.8 0.0 0.0031 17.9 0.0 1.9 2 0 0 2 2 2 1 SAM domain (Sterile alpha motif) SBF_like PF13593.6 CTQ29241.1 - 1.5e-100 336.6 23.8 1.7e-100 336.4 23.8 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) SBF PF01758.16 CTQ29241.1 - 2.9e-09 36.9 13.4 2.9e-09 36.9 13.4 2.4 2 1 0 2 2 2 1 Sodium Bile acid symporter family DUF4083 PF13314.6 CTQ29241.1 - 3.3 7.7 5.2 1.5 8.8 1.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) QSregVF_b PF12843.7 CTQ29242.1 - 1.4e-28 98.6 0.1 1.5e-28 98.5 0.1 1.0 1 0 0 1 1 1 1 Putative quorum-sensing-regulated virulence factor DNA_ligase_aden PF01653.18 CTQ29243.1 - 8.9e-142 471.8 0.0 1.4e-141 471.2 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent DNA ligase adenylation domain DNA_ligase_OB PF03120.16 CTQ29243.1 - 8.6e-36 121.7 1.5 2.3e-35 120.3 1.5 1.8 1 0 0 1 1 1 1 NAD-dependent DNA ligase OB-fold domain HHH_2 PF12826.7 CTQ29243.1 - 4.8e-25 87.4 0.2 3.6e-22 78.2 0.3 3.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 CTQ29243.1 - 1e-14 54.9 0.2 6.5e-06 26.7 0.1 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix domain BRCT PF00533.26 CTQ29243.1 - 2e-13 50.5 0.0 4.7e-13 49.3 0.0 1.6 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain DNA_ligase_ZBD PF03119.16 CTQ29243.1 - 1.8e-10 40.6 4.7 5.3e-10 39.1 4.7 1.9 1 0 0 1 1 1 1 NAD-dependent DNA ligase C4 zinc finger domain PTCB-BRCT PF12738.7 CTQ29243.1 - 6.9e-06 25.9 0.0 1.6e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 twin BRCT domain HHH PF00633.23 CTQ29243.1 - 8e-05 22.3 0.1 0.00061 19.5 0.0 2.6 3 0 0 3 3 3 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 CTQ29243.1 - 0.058 14.0 0.1 0.75 10.4 0.0 2.5 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold HHH_3 PF12836.7 CTQ29243.1 - 0.15 12.3 0.0 30 5.0 0.0 3.3 3 0 0 3 3 3 0 Helix-hairpin-helix motif DUF1799 PF08809.11 CTQ29243.1 - 0.19 12.0 0.0 0.41 10.9 0.0 1.6 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) ZipA_C PF04354.13 CTQ29244.1 - 4.2e-50 168.9 0.4 5.5e-50 168.5 0.4 1.1 1 0 0 1 1 1 1 ZipA, C-terminal FtsZ-binding domain TFIIA PF03153.13 CTQ29244.1 - 0.61 10.0 21.7 0.87 9.5 21.7 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit EI24 PF07264.11 CTQ29245.1 - 2.3e-41 142.0 21.1 2.7e-41 141.8 21.1 1.0 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) PALP PF00291.25 CTQ29246.1 - 8.6e-69 232.2 0.2 9.8e-69 232.0 0.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ADH_zinc_N PF00107.26 CTQ29246.1 - 0.019 14.9 0.7 0.23 11.5 0.4 2.5 2 1 0 2 2 2 0 Zinc-binding dehydrogenase DFP PF04127.15 CTQ29246.1 - 0.029 14.2 0.1 0.056 13.3 0.1 1.4 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein PTS-HPr PF00381.19 CTQ29247.1 - 2.2e-28 98.3 0.2 2.4e-28 98.2 0.2 1.0 1 0 0 1 1 1 1 PTS HPr component phosphorylation site MG1 PF17790.1 CTQ29247.1 - 0.013 15.9 0.0 0.017 15.5 0.0 1.3 1 1 0 1 1 1 0 Macroglobulin domain MG1 PEP-utilizers_C PF02896.18 CTQ29248.1 - 1.3e-126 421.7 0.2 1.7e-126 421.3 0.2 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilisers_N PF05524.13 CTQ29248.1 - 3.3e-29 101.4 4.2 3.3e-29 101.4 4.2 2.5 3 0 0 3 3 3 1 PEP-utilising enzyme, N-terminal PEP-utilizers PF00391.23 CTQ29248.1 - 2.3e-23 81.7 0.2 8.6e-23 79.9 0.2 2.1 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain HpcH_HpaI PF03328.14 CTQ29248.1 - 0.00011 21.5 0.5 0.00032 19.9 0.1 1.9 2 0 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family CHASE7 PF17151.4 CTQ29248.1 - 0.024 14.3 0.1 0.044 13.4 0.1 1.3 1 0 0 1 1 1 0 Periplasmic sensor domain PTS_EIIA_1 PF00358.20 CTQ29249.1 - 1.6e-49 166.9 1.3 1.9e-49 166.6 1.3 1.1 1 0 0 1 1 1 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Biotin_lipoyl_2 PF13533.6 CTQ29249.1 - 0.034 14.0 0.1 0.57 10.0 0.0 2.6 3 0 0 3 3 3 0 Biotin-lipoyl like RnfC_N PF13375.6 CTQ29249.1 - 0.067 13.1 0.4 2.5 8.1 0.1 2.9 2 1 1 3 3 3 0 RnfC Barrel sandwich hybrid domain Phos_pyr_kin PF08543.12 CTQ29251.1 - 2.3e-22 79.6 0.0 2.8e-22 79.3 0.0 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 CTQ29251.1 - 9.9e-10 38.2 0.1 1.7e-09 37.4 0.1 1.4 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Aminotran_1_2 PF00155.21 CTQ29252.1 - 5.7e-28 98.1 0.0 7e-28 97.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 CTQ29252.1 - 1.9e-17 62.7 1.0 5.8e-17 61.1 0.1 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family DegT_DnrJ_EryC1 PF01041.17 CTQ29252.1 - 5.5e-06 25.9 0.0 8.9e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family HTH_36 PF13730.6 CTQ29252.1 - 0.0073 16.2 0.0 0.025 14.5 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ29252.1 - 0.079 12.9 0.0 0.4 10.7 0.0 2.3 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 CTQ29252.1 - 0.17 12.2 0.0 5.1 7.5 0.1 2.4 2 0 0 2 2 2 0 Transcriptional regulator HTH_41 PF14502.6 CTQ29252.1 - 0.18 11.5 0.0 0.34 10.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4440 PF14534.6 CTQ29253.1 - 1.4e-10 41.5 0.0 1.6e-10 41.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.6 CTQ29253.1 - 2.6e-09 37.4 0.0 3.2e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.7 CTQ29253.1 - 1.1e-06 29.3 0.0 1.4e-06 28.9 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_4 PF13577.6 CTQ29253.1 - 0.012 15.7 0.1 0.016 15.3 0.1 1.2 1 0 0 1 1 1 0 SnoaL-like domain CaMKII_AD PF08332.10 CTQ29253.1 - 0.058 13.5 0.1 0.13 12.4 0.1 1.5 1 1 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II association domain PALP PF00291.25 CTQ29254.1 - 9.7e-69 232.0 0.3 1.5e-68 231.4 0.3 1.3 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ABC_tran PF00005.27 CTQ29255.1 - 3.4e-38 131.2 0.0 5.3e-38 130.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ29255.1 - 2.1e-09 37.6 0.0 0.0014 18.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ29255.1 - 3.6e-09 36.4 0.0 5.9e-09 35.7 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TOBE_3 PF12857.7 CTQ29255.1 - 1.7e-08 34.3 0.1 1e-07 31.7 0.0 2.3 1 1 1 2 2 2 1 TOBE-like domain AAA_16 PF13191.6 CTQ29255.1 - 0.00011 22.6 1.1 0.0012 19.3 1.1 2.2 1 1 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 CTQ29255.1 - 0.00087 19.2 0.4 0.036 14.0 0.1 2.2 2 0 0 2 2 2 1 NACHT domain AAA_24 PF13479.6 CTQ29255.1 - 0.00089 19.0 0.1 0.16 11.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 CTQ29255.1 - 0.00095 19.1 0.1 0.0018 18.2 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 CTQ29255.1 - 0.00097 19.4 0.2 0.0039 17.5 0.2 1.9 1 1 0 1 1 1 1 AAA domain DLIC PF05783.11 CTQ29255.1 - 0.0011 17.9 0.0 0.0017 17.3 0.0 1.2 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA PF00004.29 CTQ29255.1 - 0.0012 19.3 0.0 0.013 15.9 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) CysA_C_terminal PF17850.1 CTQ29255.1 - 0.0014 19.2 0.3 0.0061 17.1 0.1 2.3 2 0 0 2 2 1 1 CysA C-terminal regulatory domain AAA_28 PF13521.6 CTQ29255.1 - 0.0017 18.6 0.1 0.0041 17.4 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATPase PF06745.13 CTQ29255.1 - 0.0021 17.5 0.1 1.8 7.8 0.0 2.2 2 0 0 2 2 2 2 KaiC AAA_29 PF13555.6 CTQ29255.1 - 0.0031 17.2 0.1 0.0073 16.0 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ29255.1 - 0.0032 18.0 0.1 0.0061 17.1 0.1 1.4 1 0 0 1 1 1 1 AAA domain TniB PF05621.11 CTQ29255.1 - 0.0047 16.4 0.1 0.22 10.9 0.1 2.3 2 0 0 2 2 2 1 Bacterial TniB protein SbcCD_C PF13558.6 CTQ29255.1 - 0.0057 16.9 0.1 0.063 13.5 0.1 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 CTQ29255.1 - 0.011 15.4 0.4 0.032 14.0 0.0 1.8 2 1 0 2 2 2 0 AAA domain PhoH PF02562.16 CTQ29255.1 - 0.015 14.8 0.0 1.2 8.5 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein NTPase_1 PF03266.15 CTQ29255.1 - 0.016 15.1 0.2 0.1 12.5 0.0 2.0 2 0 0 2 2 2 0 NTPase AAA_18 PF13238.6 CTQ29255.1 - 0.021 15.4 0.0 0.06 13.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 CTQ29255.1 - 0.024 13.5 0.5 1.3 7.7 0.0 2.7 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.6 CTQ29255.1 - 0.043 14.0 2.4 0.32 11.2 2.4 2.2 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ29255.1 - 0.048 13.2 0.4 0.48 10.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 CTQ29255.1 - 0.061 12.9 0.0 0.18 11.4 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain TsaE PF02367.17 CTQ29255.1 - 0.074 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 CTQ29255.1 - 0.076 12.1 0.2 0.85 8.6 0.1 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_14 PF13173.6 CTQ29255.1 - 0.11 12.6 0.0 0.78 9.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 CTQ29255.1 - 0.11 12.7 0.0 1.9 8.7 0.0 2.2 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_5 PF07728.14 CTQ29255.1 - 0.12 12.4 0.3 0.46 10.5 0.0 2.0 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 CTQ29255.1 - 0.13 11.4 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain cobW PF02492.19 CTQ29255.1 - 0.13 11.8 0.3 0.3 10.6 0.1 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RecA PF00154.21 CTQ29255.1 - 0.13 11.7 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein APS_kinase PF01583.20 CTQ29255.1 - 0.15 12.0 0.3 16 5.4 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase DEAD PF00270.29 CTQ29255.1 - 0.15 11.8 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase BPD_transp_1 PF00528.22 CTQ29256.1 - 1.6e-14 54.1 13.1 1.6e-14 54.1 13.1 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF4013 PF13197.6 CTQ29256.1 - 0.00084 19.2 5.2 0.00084 19.2 5.2 2.8 2 1 0 2 2 2 1 Protein of unknown function (DUF4013) DUF4199 PF13858.6 CTQ29256.1 - 6.9 7.0 11.3 1.1 9.6 4.5 2.9 2 1 2 4 4 4 0 Protein of unknown function (DUF4199) BPD_transp_1 PF00528.22 CTQ29257.1 - 2.9e-33 115.2 13.4 2.9e-33 115.2 13.4 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Abhydrolase_9_N PF15420.6 CTQ29257.1 - 0.068 13.2 0.4 0.068 13.2 0.4 2.5 2 1 0 2 2 2 0 Alpha/beta-hydrolase family N-terminus SBP_bac_11 PF13531.6 CTQ29258.1 - 5.7e-40 137.5 0.3 7.6e-40 137.1 0.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ29258.1 - 1.1e-19 71.6 8.3 1.4e-19 71.2 8.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ29258.1 - 2.3e-07 30.5 0.6 4.2e-07 29.6 0.6 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 CTQ29258.1 - 6.8e-07 29.4 4.3 6.8e-07 29.4 4.3 2.0 1 1 0 2 2 2 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 CTQ29258.1 - 9.8e-05 21.5 0.0 0.00018 20.7 0.0 1.4 1 0 0 1 1 1 1 PBP superfamily domain PBP_like_2 PF12849.7 CTQ29258.1 - 0.092 12.4 2.1 1.4 8.5 2.1 3.0 1 1 0 1 1 1 0 PBP superfamily domain TFIIE_alpha PF02002.17 CTQ29258.1 - 0.095 12.6 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit Dyp_perox PF04261.12 CTQ29259.1 - 4.1e-95 318.5 0.0 5.5e-95 318.1 0.0 1.2 1 0 0 1 1 1 1 Dyp-type peroxidase family DUF1131 PF06572.12 CTQ29260.1 - 1.8e-81 271.9 0.3 2e-81 271.7 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1131) DUF2919 PF11143.8 CTQ29261.1 - 3.4e-48 163.7 10.4 3.7e-48 163.6 10.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2919) Acetyltransf_1 PF00583.25 CTQ29262.1 - 2.6e-20 72.8 0.1 3.3e-20 72.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ29262.1 - 2.3e-13 50.4 0.3 3.9e-13 49.6 0.3 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ29262.1 - 1.1e-12 48.0 0.0 1.6e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ29262.1 - 2.1e-08 34.3 0.1 1.1e-06 28.7 0.1 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ29262.1 - 2.5e-08 33.8 0.0 3.5e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.7 CTQ29262.1 - 3.2e-07 30.6 0.1 4.3e-07 30.2 0.1 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 CTQ29262.1 - 0.00044 20.0 0.0 0.00053 19.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_4 PF13420.7 CTQ29262.1 - 0.0023 18.1 0.0 0.0041 17.3 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 CTQ29262.1 - 0.0038 17.9 0.0 0.0047 17.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ29262.1 - 0.015 15.4 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 CTQ29262.1 - 0.016 14.7 0.0 0.017 14.6 0.0 1.2 1 0 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_13 PF13880.6 CTQ29262.1 - 0.052 13.5 0.0 0.08 12.9 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Gly_acyl_tr_C PF08444.10 CTQ29262.1 - 0.084 13.1 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region GNAT_acetyltran PF12746.7 CTQ29262.1 - 0.18 11.3 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase Amidase_3 PF01520.18 CTQ29263.1 - 2.2e-52 177.7 0.0 4.1e-52 176.8 0.0 1.4 1 1 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase TAT_signal PF10518.9 CTQ29263.1 - 0.0081 16.0 1.9 0.0081 16.0 1.9 1.9 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence RICTOR_phospho PF14665.6 CTQ29263.1 - 0.11 12.8 0.2 18 5.7 0.1 3.0 3 0 0 3 3 3 0 Rapamycin-insensitive companion of mTOR, phosphorylation-site Coprogen_oxidas PF01218.18 CTQ29264.1 - 2.7e-133 443.3 0.0 3e-133 443.1 0.0 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase HTH_18 PF12833.7 CTQ29265.1 - 6.7e-23 80.8 0.9 3.4e-22 78.5 0.0 2.5 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ29265.1 - 7.3e-14 51.4 0.0 3.1e-07 30.3 0.0 3.3 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family Glyoxalase_4 PF13669.6 CTQ29265.1 - 0.0061 16.8 0.1 0.19 12.0 0.0 3.0 3 0 0 3 3 3 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HTH_11 PF08279.12 CTQ29265.1 - 0.019 14.9 0.0 0.05 13.6 0.0 1.7 1 0 0 1 1 1 0 HTH domain EutK_C PF16365.5 CTQ29266.1 - 5.9e-38 128.7 2.2 5.9e-38 128.7 2.2 2.0 2 0 0 2 2 2 1 Ethanolamine utilization protein EutK C-terminus BMC PF00936.19 CTQ29266.1 - 1.2e-21 76.5 2.7 2.7e-21 75.4 0.9 2.0 2 0 0 2 2 2 1 BMC domain FaeA PF04703.12 CTQ29266.1 - 0.0071 16.7 0.0 0.022 15.2 0.0 1.7 2 0 0 2 2 2 1 FaeA-like protein HTH_IclR PF09339.10 CTQ29266.1 - 0.01 15.6 0.3 0.028 14.2 0.3 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain TrmB PF01978.19 CTQ29266.1 - 0.065 13.1 0.0 0.16 11.9 0.0 1.6 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB BMC PF00936.19 CTQ29267.1 - 6.4e-20 70.9 0.9 3e-11 43.1 0.4 2.3 2 0 0 2 2 2 2 BMC domain EutC PF05985.11 CTQ29268.1 - 4.3e-79 265.1 0.0 5.8e-79 264.7 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine ammonia-lyase light chain (EutC) TANGO2 PF05742.12 CTQ29268.1 - 0.068 13.2 0.0 0.094 12.7 0.0 1.1 1 0 0 1 1 1 0 Transport and Golgi organisation 2 EutB PF06751.11 CTQ29269.1 - 2.4e-204 679.1 0.1 2.7e-204 679.0 0.1 1.0 1 0 0 1 1 1 1 Ethanolamine ammonia lyase large subunit (EutB) EutA PF06277.11 CTQ29270.1 - 2.8e-174 580.5 0.0 3.2e-174 580.3 0.0 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutA FtsA PF14450.6 CTQ29270.1 - 3.9e-05 24.0 0.1 0.079 13.4 0.0 2.4 2 0 0 2 2 2 2 Cell division protein FtsA MreB_Mbl PF06723.13 CTQ29270.1 - 0.014 14.3 1.4 0.037 12.8 0.3 2.1 2 0 0 2 2 2 0 MreB/Mbl protein Ppx-GppA PF02541.16 CTQ29270.1 - 0.028 13.8 0.0 0.049 13.1 0.0 1.3 1 0 0 1 1 1 0 Ppx/GppA phosphatase family EutH PF04346.12 CTQ29271.1 - 3.6e-140 467.1 44.3 4.1e-140 466.9 44.3 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation protein, EutH Fe-ADH PF00465.19 CTQ29273.1 - 2.3e-112 375.5 11.1 2.6e-112 375.3 11.1 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ29273.1 - 6.1e-18 65.4 4.4 9.6e-09 35.3 0.0 2.3 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase FtsA PF14450.6 CTQ29274.1 - 5.9e-08 33.1 0.1 1.3e-07 32.0 0.0 1.6 2 0 0 2 2 2 1 Cell division protein FtsA MreB_Mbl PF06723.13 CTQ29274.1 - 1.9e-07 30.2 0.0 8.6e-05 21.5 0.0 2.9 2 1 1 3 3 3 2 MreB/Mbl protein PilM_2 PF11104.8 CTQ29274.1 - 5.7e-06 25.6 0.0 9.2e-06 24.9 0.0 1.3 1 0 0 1 1 1 1 Type IV pilus assembly protein PilM; EutA PF06277.11 CTQ29274.1 - 0.0015 17.5 0.1 0.0021 17.0 0.1 1.3 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutA HSP70 PF00012.20 CTQ29274.1 - 0.0085 14.3 1.0 0.0098 14.1 0.1 1.5 2 0 0 2 2 2 1 Hsp70 protein DDR PF08841.10 CTQ29274.1 - 0.012 14.7 0.1 0.019 14.0 0.1 1.3 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain Ppx-GppA PF02541.16 CTQ29274.1 - 0.09 12.2 0.1 0.12 11.8 0.1 1.1 1 0 0 1 1 1 0 Ppx/GppA phosphatase family Aldedh PF00171.22 CTQ29275.1 - 5.4e-32 110.9 13.7 3.1e-31 108.4 13.7 1.8 1 1 0 1 1 1 1 Aldehyde dehydrogenase family CMV_1a PF12467.8 CTQ29275.1 - 1.8 8.9 5.6 0.65 10.3 0.3 2.6 2 1 0 3 3 3 0 Cucumber mosaic virus 1a protein family EutN_CcmL PF03319.13 CTQ29276.1 - 1.7e-28 99.0 0.2 2e-28 98.8 0.2 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutN/carboxysome BMC PF00936.19 CTQ29277.1 - 1.2e-27 95.7 6.2 1.5e-27 95.4 6.2 1.1 1 0 0 1 1 1 1 BMC domain PTA_PTB PF01515.19 CTQ29278.1 - 3.8e-114 381.3 0.0 4.4e-114 381.1 0.0 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase SPDY PF03771.16 CTQ29278.1 - 0.34 10.9 3.5 0.71 9.9 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF317) Cob_adeno_trans PF01923.18 CTQ29279.1 - 3e-12 47.0 0.1 4.6e-12 46.4 0.1 1.2 1 0 0 1 1 1 1 Cobalamin adenosyltransferase EutQ PF06249.12 CTQ29280.1 - 1.8e-66 222.6 0.0 2.4e-66 222.2 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.12 CTQ29280.1 - 8e-08 31.9 0.0 1.9e-07 30.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 CTQ29280.1 - 7.5e-06 25.6 0.0 1.7e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 Cupin domain AraC_binding_2 PF14525.6 CTQ29280.1 - 0.0069 16.1 0.1 0.024 14.3 0.0 1.8 2 1 0 2 2 2 1 AraC-binding-like domain AraC_binding PF02311.19 CTQ29280.1 - 0.0075 16.2 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_6 PF12852.7 CTQ29280.1 - 0.043 13.5 0.0 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 Cupin PduV-EutP PF10662.9 CTQ29281.1 - 8e-28 97.0 0.0 9.2e-28 96.8 0.0 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation MMR_HSR1 PF01926.23 CTQ29281.1 - 2.3e-05 24.4 0.1 0.00015 21.8 0.1 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase ABC_tran PF00005.27 CTQ29281.1 - 3.5e-05 24.3 0.0 3.5e-05 24.3 0.0 1.2 1 1 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 CTQ29281.1 - 3.7e-05 23.7 0.0 0.011 15.6 0.1 2.4 2 1 0 2 2 2 1 RsgA GTPase GTP_EFTU PF00009.27 CTQ29281.1 - 0.00014 21.4 0.0 0.31 10.5 0.0 2.4 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain dNK PF01712.19 CTQ29281.1 - 0.001 19.0 0.6 0.12 12.2 0.1 2.1 1 1 1 2 2 2 1 Deoxynucleoside kinase cobW PF02492.19 CTQ29281.1 - 0.0016 18.1 0.1 0.0095 15.5 0.0 1.9 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 CTQ29281.1 - 0.0018 18.4 0.1 0.03 14.4 0.0 2.1 2 0 0 2 2 2 1 Dynamin family AAA_28 PF13521.6 CTQ29281.1 - 0.003 17.8 0.0 0.0051 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain FeoB_N PF02421.18 CTQ29281.1 - 0.0063 16.1 0.3 0.014 14.9 0.3 1.9 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_23 PF13476.6 CTQ29281.1 - 0.0076 16.8 0.0 0.01 16.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 CTQ29281.1 - 0.01 15.7 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 CTQ29281.1 - 0.029 14.6 0.0 0.043 14.1 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 CTQ29281.1 - 0.031 14.0 0.0 0.052 13.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRPRB PF09439.10 CTQ29281.1 - 0.068 12.6 0.0 0.099 12.1 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_18 PF13238.6 CTQ29281.1 - 0.086 13.4 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 CTQ29281.1 - 0.15 11.8 0.1 0.4 10.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain Arf PF00025.21 CTQ29281.1 - 0.18 11.2 0.0 1.4 8.4 0.0 2.2 3 0 0 3 3 3 0 ADP-ribosylation factor family ATP_bind_1 PF03029.17 CTQ29281.1 - 0.19 11.5 0.0 0.82 9.4 0.0 1.9 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein Roc PF08477.13 CTQ29281.1 - 0.21 11.8 0.0 0.38 11.0 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Septin PF00735.18 CTQ29281.1 - 0.23 10.7 0.0 0.33 10.2 0.0 1.2 1 0 0 1 1 1 0 Septin BMC PF00936.19 CTQ29282.1 - 2.7e-11 43.3 0.1 3.6e-11 42.9 0.1 1.2 1 0 0 1 1 1 1 BMC domain Glyco_transf_21 PF13506.6 CTQ29282.1 - 0.074 12.5 0.1 0.085 12.3 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 21 PTA_PTB PF01515.19 CTQ29283.1 - 1.5e-101 339.9 0.0 2e-101 339.5 0.0 1.2 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase malic PF00390.19 CTQ29283.1 - 6.6e-31 107.5 0.2 1.7e-28 99.7 0.2 2.5 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 CTQ29283.1 - 5.7e-22 78.2 4.3 1.3e-21 77.1 1.1 2.7 2 1 0 2 2 2 1 Malic enzyme, NAD binding domain ELFV_dehydrog PF00208.21 CTQ29283.1 - 0.0032 17.2 0.4 0.011 15.5 0.4 1.9 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Oxidored_nitro PF00148.19 CTQ29283.1 - 0.012 14.4 0.1 0.037 12.8 0.1 1.8 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Amidase_2 PF01510.25 CTQ29283.1 - 0.19 12.2 0.0 0.44 11.0 0.0 1.6 1 0 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase TAL_FSA PF00923.19 CTQ29284.1 - 1e-99 333.5 0.0 1.2e-99 333.3 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase Transketolase_N PF00456.21 CTQ29285.1 - 7.1e-170 564.3 0.0 1e-169 563.8 0.0 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Transket_pyr PF02779.24 CTQ29285.1 - 2.4e-47 160.9 0.1 6.4e-47 159.5 0.1 1.7 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 CTQ29285.1 - 4.9e-19 68.4 0.0 1e-18 67.4 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain DXP_synthase_N PF13292.6 CTQ29285.1 - 6.7e-06 25.5 0.0 0.018 14.2 0.0 2.3 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 CTQ29285.1 - 0.00013 21.8 0.4 0.096 12.5 0.1 3.4 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 CTQ29285.1 - 0.0009 18.3 0.0 0.0016 17.4 0.0 1.3 1 0 0 1 1 1 1 Dehydrogenase E1 component XFP_C PF09363.10 CTQ29285.1 - 0.028 13.9 0.0 0.049 13.1 0.0 1.3 1 0 0 1 1 1 0 XFP C-terminal domain DUF1176 PF06674.11 CTQ29286.1 - 3.5e-98 329.1 0.0 3.9e-98 328.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1176) NUDIX PF00293.28 CTQ29287.1 - 4.3e-10 39.7 0.1 5.7e-10 39.3 0.1 1.2 1 0 0 1 1 1 1 NUDIX domain Fer4_20 PF14691.6 CTQ29288.1 - 1.5e-36 124.6 1.6 1.5e-36 124.6 1.6 5.1 2 1 2 5 5 5 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.14 CTQ29288.1 - 2.1e-26 92.8 0.1 2.1e-21 76.5 0.1 1.9 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Fer4_9 PF13187.6 CTQ29288.1 - 1.9e-12 47.1 39.4 1.6e-07 31.4 9.9 4.1 4 0 0 4 4 4 3 4Fe-4S dicluster domain Pyr_redox PF00070.27 CTQ29288.1 - 1.2e-10 41.8 0.6 0.00047 20.7 0.0 3.5 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Fer4_11 PF13247.6 CTQ29288.1 - 7.2e-10 38.9 13.9 7.2e-10 38.9 13.9 2.7 3 0 0 3 3 1 1 4Fe-4S dicluster domain Pyr_redox_3 PF13738.6 CTQ29288.1 - 9.4e-09 34.9 0.1 0.0033 16.7 0.2 2.8 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ29288.1 - 1.7e-08 34.5 0.0 5.3e-08 33.0 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Fer4_7 PF12838.7 CTQ29288.1 - 7.8e-08 32.8 54.6 0.00025 21.6 12.7 4.5 1 1 3 4 4 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ29288.1 - 7.9e-08 32.1 48.2 5.8e-05 23.0 2.0 6.2 6 0 0 6 6 5 3 4Fe-4S binding domain Fer4 PF00037.27 CTQ29288.1 - 1.2e-06 28.0 1.8 1.2e-06 28.0 1.8 6.4 8 1 0 8 8 5 3 4Fe-4S binding domain FAD_binding_3 PF01494.19 CTQ29288.1 - 1.4e-06 27.8 0.3 6.7e-06 25.6 0.0 2.1 2 0 0 2 2 2 1 FAD binding domain FMO-like PF00743.19 CTQ29288.1 - 5.5e-06 25.1 0.0 4.7e-05 22.0 0.0 2.0 2 0 0 2 2 2 1 Flavin-binding monooxygenase-like Fer4_10 PF13237.6 CTQ29288.1 - 6.2e-06 26.2 11.3 6.2e-06 26.2 11.3 4.8 2 2 2 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 CTQ29288.1 - 3.8e-05 23.5 49.1 0.0015 18.5 1.9 6.0 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_21 PF14697.6 CTQ29288.1 - 7.6e-05 22.8 30.2 0.001 19.2 11.7 4.4 2 2 2 4 4 4 2 4Fe-4S dicluster domain Thi4 PF01946.17 CTQ29288.1 - 9.4e-05 21.8 0.1 0.00024 20.4 0.0 1.7 2 0 0 2 2 2 1 Thi4 family NAD_binding_7 PF13241.6 CTQ29288.1 - 0.0002 21.7 0.0 0.44 11.0 0.0 3.0 2 1 0 2 2 2 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 CTQ29288.1 - 0.00029 20.2 0.7 0.34 10.2 0.0 2.8 2 1 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 CTQ29288.1 - 0.00047 19.6 1.1 0.00069 19.1 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 CTQ29288.1 - 0.00051 18.9 0.5 0.00084 18.1 0.1 1.6 2 0 0 2 2 2 1 HI0933-like protein Shikimate_DH PF01488.20 CTQ29288.1 - 0.00056 20.0 0.0 0.47 10.5 0.0 2.7 3 0 0 3 3 2 1 Shikimate / quinate 5-dehydrogenase Fer4_4 PF12800.7 CTQ29288.1 - 0.00087 19.6 3.5 0.00087 19.6 3.5 6.3 6 0 0 6 6 6 2 4Fe-4S binding domain 2-Hacid_dh_C PF02826.19 CTQ29288.1 - 0.0019 17.6 0.0 0.0073 15.7 0.0 2.0 3 0 0 3 3 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DAO PF01266.24 CTQ29288.1 - 0.0023 17.6 0.5 0.008 15.8 0.3 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase F420_oxidored PF03807.17 CTQ29288.1 - 0.0052 17.3 0.1 3.9 8.1 0.0 3.5 3 0 0 3 3 2 1 NADP oxidoreductase coenzyme F420-dependent Fer4_8 PF13183.6 CTQ29288.1 - 0.0066 16.9 9.2 0.0066 16.9 9.2 4.5 2 1 1 3 3 3 1 4Fe-4S dicluster domain XdhC_C PF13478.6 CTQ29288.1 - 0.011 16.3 0.0 1.9 9.0 0.0 2.7 2 0 0 2 2 2 0 XdhC Rossmann domain NAD_binding_9 PF13454.6 CTQ29288.1 - 0.012 15.6 0.5 0.052 13.5 0.2 2.2 3 0 0 3 3 1 0 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 CTQ29288.1 - 0.013 14.7 0.3 0.048 12.7 0.1 2.1 2 0 0 2 2 2 0 FAD binding domain Fer4_16 PF13484.6 CTQ29288.1 - 0.014 16.4 37.7 0.85 10.6 3.9 6.1 3 1 2 5 5 5 0 4Fe-4S double cluster binding domain Amino_oxidase PF01593.24 CTQ29288.1 - 0.034 13.4 1.2 1.5 8.0 0.0 2.8 3 0 0 3 3 3 0 Flavin containing amine oxidoreductase K_oxygenase PF13434.6 CTQ29288.1 - 0.052 12.7 0.0 10 5.2 0.0 2.3 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Fer4_17 PF13534.6 CTQ29288.1 - 0.14 12.7 43.2 0.038 14.5 9.3 5.0 3 1 1 4 4 4 0 4Fe-4S dicluster domain ACR_tran PF00873.19 CTQ29289.1 - 0 1403.7 11.0 0 1403.6 11.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 CTQ29289.1 - 1.1e-10 41.0 33.2 3.5e-08 32.8 10.7 3.3 3 0 0 3 3 3 2 MMPL family SecD_SecF PF02355.16 CTQ29289.1 - 3e-06 26.7 23.4 0.00059 19.3 2.0 2.3 2 0 0 2 2 2 2 Protein export membrane protein Y2_Tnp PF04986.13 CTQ29289.1 - 0.17 11.9 0.0 0.38 10.8 0.0 1.5 1 0 0 1 1 1 0 Putative transposase DUF2993 PF11209.8 CTQ29289.1 - 2 8.6 6.9 4.5 7.5 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2993) EbsA PF17255.2 CTQ29289.1 - 8.8 6.7 6.0 17 5.8 0.5 3.0 3 0 0 3 3 3 0 EbsA-like protein ArsC PF03960.15 CTQ29290.1 - 2.8e-17 62.5 0.0 3.2e-17 62.3 0.0 1.0 1 0 0 1 1 1 1 ArsC family Glutaredoxin PF00462.24 CTQ29290.1 - 0.036 14.3 0.0 0.051 13.8 0.0 1.2 1 0 0 1 1 1 0 Glutaredoxin Peptidase_M20 PF01546.28 CTQ29291.1 - 1.8e-43 148.7 0.0 2.3e-43 148.3 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 CTQ29291.1 - 1.8e-23 82.5 0.0 4.3e-23 81.3 0.0 1.7 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 CTQ29291.1 - 0.033 13.9 0.0 0.16 11.6 0.0 1.9 2 0 0 2 2 2 0 Peptidase family M28 Peptidase_M18 PF02127.15 CTQ29291.1 - 0.082 11.7 0.0 0.11 11.2 0.0 1.1 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) UPF0370 PF13980.6 CTQ29292.1 - 2.4e-32 110.8 12.2 2.7e-32 110.6 12.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0370) PhoR PF11808.8 CTQ29292.1 - 0.046 14.1 0.0 0.055 13.9 0.0 1.1 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR Abhydrolase_2 PF02230.16 CTQ29293.1 - 4e-47 160.8 0.0 4.6e-47 160.6 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase DLH PF01738.18 CTQ29293.1 - 5.2e-09 36.0 0.0 7.1e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 CTQ29293.1 - 4.5e-05 23.0 0.0 0.16 11.4 0.0 2.9 2 1 1 3 3 3 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 CTQ29293.1 - 0.0057 15.9 0.1 0.25 10.6 0.0 2.5 2 1 1 3 3 3 1 Serine aminopeptidase, S33 FSH1 PF03959.13 CTQ29293.1 - 0.0081 15.8 0.1 0.017 14.8 0.1 1.6 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Esterase PF00756.20 CTQ29293.1 - 0.082 12.5 0.0 0.089 12.4 0.0 1.2 1 0 0 1 1 1 0 Putative esterase Helicase_RecD PF05127.14 CTQ29294.1 - 1e-42 146.0 0.3 7.9e-41 139.8 0.3 2.3 1 1 0 1 1 1 1 Helicase tRNA_bind_3 PF17176.4 CTQ29294.1 - 1.4e-36 125.4 8.4 4.1e-36 123.9 8.4 1.9 1 0 0 1 1 1 1 tRNA-binding domain GNAT_acetyltr_2 PF13718.6 CTQ29294.1 - 4.1e-26 91.8 0.1 5.4e-16 58.7 0.0 2.2 1 1 1 2 2 2 2 GNAT acetyltransferase 2 AAA_30 PF13604.6 CTQ29294.1 - 1.4e-06 28.2 0.8 3.9e-06 26.7 0.5 1.9 1 1 1 2 2 2 1 AAA domain DUF1726 PF08351.11 CTQ29294.1 - 0.00025 20.9 0.0 0.0005 20.0 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1726) Acetyltransf_7 PF13508.7 CTQ29294.1 - 0.00053 20.4 0.0 0.0012 19.3 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ29294.1 - 0.00076 19.4 0.0 0.0018 18.2 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain AAA_22 PF13401.6 CTQ29294.1 - 0.0033 17.7 0.0 0.81 10.0 0.0 2.9 2 1 1 3 3 3 1 AAA domain Acetyltransf_1 PF00583.25 CTQ29294.1 - 0.013 15.7 0.1 0.037 14.2 0.0 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) family AAA_16 PF13191.6 CTQ29294.1 - 1.1 9.6 7.4 0.079 13.3 0.6 2.5 2 2 1 3 3 3 0 AAA ATPase domain Zn_peptidase PF04228.13 CTQ29295.1 - 3.5e-140 466.5 0.6 3.9e-140 466.3 0.6 1.0 1 0 0 1 1 1 1 Putative neutral zinc metallopeptidase SAICAR_synt PF01259.18 CTQ29296.1 - 2.9e-60 204.0 0.0 3.3e-60 203.8 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase Peptidase_M42 PF05343.14 CTQ29296.1 - 0.035 13.1 0.0 0.051 12.6 0.0 1.2 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase Lipoprotein_18 PF06804.11 CTQ29297.1 - 1.8e-108 362.4 0.8 2.1e-108 362.2 0.8 1.0 1 0 0 1 1 1 1 NlpB/DapX lipoprotein DHDPS PF00701.22 CTQ29298.1 - 2e-121 404.2 0.1 2.2e-121 404.0 0.1 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family ACT_6 PF13740.6 CTQ29299.1 - 3.1e-26 91.1 0.1 2e-24 85.4 0.0 2.6 2 1 0 2 2 2 1 ACT domain ACT PF01842.25 CTQ29299.1 - 4.1e-06 26.5 0.0 0.0024 17.6 0.0 2.3 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 CTQ29299.1 - 4.3e-05 24.0 0.0 0.087 13.4 0.0 3.1 3 0 0 3 3 3 2 ACT domain AhpC-TSA PF00578.21 CTQ29300.1 - 6.2e-39 132.7 0.0 7.6e-39 132.5 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 CTQ29300.1 - 5.3e-27 94.3 0.0 6.3e-27 94.1 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 CTQ29300.1 - 8.1e-06 25.8 0.0 1.3e-05 25.2 0.0 1.3 1 1 0 1 1 1 1 SCO1/SenC AhpC-TSA_2 PF13911.6 CTQ29300.1 - 8.5e-05 22.6 0.0 0.00013 22.0 0.0 1.4 1 1 0 1 1 1 1 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 CTQ29300.1 - 0.00041 20.0 0.0 0.00044 19.9 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) GSHPx PF00255.19 CTQ29300.1 - 0.0053 16.3 0.0 0.008 15.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione peroxidase Thioredoxin_8 PF13905.6 CTQ29300.1 - 0.11 12.9 0.0 0.15 12.4 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like AI-2E_transport PF01594.16 CTQ29301.1 - 2.3e-84 283.4 41.3 2.6e-84 283.2 41.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter Peptidase_M48 PF01435.18 CTQ29302.1 - 8e-27 94.3 0.1 1.5e-26 93.4 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M48 TPR_19 PF14559.6 CTQ29302.1 - 5.8e-14 52.4 10.5 1.4e-07 31.9 0.3 3.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ29302.1 - 2.6e-06 27.8 12.4 0.027 15.3 0.0 4.8 4 1 0 4 4 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 CTQ29302.1 - 0.00067 20.3 8.9 0.19 12.4 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 CTQ29302.1 - 0.00081 19.3 1.5 0.58 10.4 0.1 4.1 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 CTQ29302.1 - 0.0015 18.9 14.9 0.023 15.3 0.1 5.0 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 CTQ29302.1 - 0.004 17.7 4.5 1.9 9.3 0.2 4.3 3 0 0 3 3 3 1 Tetratricopeptide repeat DUF4157 PF13699.6 CTQ29302.1 - 0.012 15.8 0.2 0.012 15.8 0.2 2.3 3 0 0 3 3 2 0 Domain of unknown function (DUF4157) TPR_11 PF13414.6 CTQ29302.1 - 0.017 14.8 0.8 10 5.9 0.1 3.4 3 0 0 3 3 3 0 TPR repeat ANAPC3 PF12895.7 CTQ29302.1 - 0.033 14.4 0.5 5.2 7.4 0.1 3.2 1 1 1 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 DUF2268 PF10026.9 CTQ29302.1 - 0.066 12.8 0.1 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 Predicted Zn-dependent protease (DUF2268) RPN1_RPN2_N PF17781.1 CTQ29302.1 - 0.11 11.9 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 RPN1/RPN2 N-terminal domain GerPE PF10970.8 CTQ29302.1 - 0.12 12.5 0.1 0.47 10.6 0.0 1.9 2 0 0 2 2 2 0 Spore germination protein GerPE TPR_8 PF13181.6 CTQ29302.1 - 0.2 12.0 0.7 18 5.9 0.0 3.9 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 CTQ29302.1 - 0.34 11.2 7.9 6.5 7.1 0.8 4.0 3 1 0 3 3 3 0 Tetratricopeptide repeat ArsC PF03960.15 CTQ29303.1 - 3.1e-21 75.1 0.1 3.6e-21 74.9 0.1 1.1 1 0 0 1 1 1 1 ArsC family Glutaredoxin PF00462.24 CTQ29303.1 - 0.057 13.6 0.0 0.086 13.1 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin Transposase_31 PF04754.12 CTQ29304.1 - 4.9e-86 287.5 0.1 6.4e-86 287.2 0.1 1.1 1 0 0 1 1 1 1 Putative transposase, YhgA-like FANCF PF11107.8 CTQ29304.1 - 0.04 13.1 0.7 0.053 12.7 0.7 1.2 1 0 0 1 1 1 0 Fanconi anemia group F protein (FANCF) Bac_DnaA PF00308.18 CTQ29305.1 - 2.3e-18 66.9 0.0 2e-17 63.8 0.0 1.9 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_16 PF13191.6 CTQ29305.1 - 0.056 13.8 1.0 0.59 10.5 1.0 2.4 1 1 0 1 1 1 0 AAA ATPase domain Xan_ur_permease PF00860.20 CTQ29306.1 - 7.8e-107 357.3 43.1 7.8e-107 357.3 43.1 1.4 2 0 0 2 2 2 1 Permease family DUF1201 PF06716.11 CTQ29306.1 - 0.1 12.6 2.1 0.38 10.8 2.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1201) UPRTase PF14681.6 CTQ29307.1 - 6.3e-65 218.5 0.0 7.1e-65 218.3 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 CTQ29307.1 - 4.2e-14 52.4 0.2 6.3e-14 51.8 0.2 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 CTQ29307.1 - 0.034 14.2 0.0 0.06 13.4 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain DUF3263 PF11662.8 CTQ29307.1 - 0.14 12.0 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3263) Glyco_hydro_1 PF00232.18 CTQ29308.1 - 1.4e-132 442.3 1.5 1.6e-132 442.1 1.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Cellulase PF00150.18 CTQ29308.1 - 0.0029 17.1 0.0 0.0048 16.4 0.0 1.3 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) ROK PF00480.20 CTQ29309.1 - 6.7e-41 140.7 0.0 8.5e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 CTQ29309.1 - 0.0067 15.5 0.1 9.6 5.1 0.0 3.0 3 0 0 3 3 3 2 Glucokinase AIRS_C PF02769.22 CTQ29310.1 - 1.8e-38 132.1 0.0 2.9e-38 131.4 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 CTQ29310.1 - 2e-15 57.2 0.6 3.5e-15 56.4 0.6 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Formyl_trans_N PF00551.19 CTQ29311.1 - 1.5e-65 220.4 0.0 1.7e-65 220.2 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase PP_kinase_C_1 PF17941.1 CTQ29312.1 - 1.3e-74 249.2 0.2 2.2e-74 248.5 0.2 1.4 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain 1 PP_kinase_C PF13090.6 CTQ29312.1 - 9.9e-70 233.5 0.0 5.9e-67 224.4 0.0 2.4 2 0 0 2 2 2 2 Polyphosphate kinase C-terminal domain 2 PP_kinase PF02503.17 CTQ29312.1 - 9.6e-45 152.7 0.8 1.5e-44 152.0 0.8 1.3 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PP_kinase_N PF13089.6 CTQ29312.1 - 7.6e-32 109.8 1.6 2.1e-31 108.4 1.6 1.8 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PLDc_2 PF13091.6 CTQ29312.1 - 2.5e-15 56.6 0.1 2.4e-10 40.4 0.3 2.9 2 1 0 2 2 2 2 PLD-like domain MR_MLE_C PF13378.6 CTQ29312.1 - 0.0062 16.1 0.2 0.012 15.2 0.2 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like Pyr_redox PF00070.27 CTQ29312.1 - 0.1 13.2 0.0 0.63 10.6 0.0 2.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Ppx-GppA PF02541.16 CTQ29313.1 - 8.3e-101 337.2 0.1 1.8e-100 336.0 0.0 1.6 2 0 0 2 2 2 1 Ppx/GppA phosphatase family FtsA PF14450.6 CTQ29313.1 - 0.0093 16.4 0.3 0.33 11.4 0.0 2.9 2 2 0 2 2 2 1 Cell division protein FtsA HD PF01966.22 CTQ29313.1 - 0.044 14.0 0.0 0.13 12.5 0.0 1.8 2 0 0 2 2 2 0 HD domain EAL PF00563.20 CTQ29314.1 - 3.7e-63 213.2 0.0 5.2e-63 212.7 0.0 1.2 1 0 0 1 1 1 1 EAL domain MASE1 PF05231.14 CTQ29314.1 - 1.2e-37 129.7 37.9 1.7e-37 129.2 37.9 1.1 1 0 0 1 1 1 1 MASE1 DUF2633 PF11119.8 CTQ29315.1 - 2e-32 110.9 0.5 2.3e-32 110.7 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2633) Cation_ATPase_C PF00689.21 CTQ29315.1 - 0.017 14.8 0.1 0.018 14.7 0.1 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus Sigma_reg_N PF13800.6 CTQ29315.1 - 0.097 13.0 0.0 0.11 12.8 0.0 1.0 1 0 0 1 1 1 0 Sigma factor regulator N-terminal LysR_substrate PF03466.20 CTQ29316.1 - 2.4e-44 151.2 4.2 3.9e-44 150.5 4.2 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29316.1 - 3e-20 71.9 2.0 7.7e-20 70.6 2.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family PBP_like PF12727.7 CTQ29316.1 - 0.0014 17.7 0.2 0.039 13.1 0.0 2.4 1 1 1 2 2 2 1 PBP superfamily domain Glyco_trans_1_3 PF13528.6 CTQ29316.1 - 0.0016 17.8 0.1 0.0026 17.1 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 1 SulA PF03846.14 CTQ29316.1 - 0.011 15.6 0.0 3.2 7.7 0.0 2.3 2 0 0 2 2 2 0 Cell division inhibitor SulA HemN_C PF06969.16 CTQ29316.1 - 0.07 13.2 0.1 0.22 11.6 0.0 1.9 2 0 0 2 2 2 0 HemN C-terminal domain HTH_24 PF13412.6 CTQ29316.1 - 0.078 12.6 0.1 0.54 9.9 0.0 2.4 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 CTQ29316.1 - 0.083 12.8 0.0 2.3 8.2 0.0 2.9 4 0 0 4 4 4 0 MarR family P22_Cro PF14549.6 CTQ29316.1 - 0.14 12.0 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro MFS_1 PF07690.16 CTQ29317.1 - 1.8e-14 53.5 50.6 7.5e-14 51.4 39.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Radical_SAM PF04055.21 CTQ29318.1 - 1.3e-10 41.9 0.0 2.2e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 CTQ29318.1 - 6.6e-08 33.0 0.1 1.7e-07 31.7 0.1 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 CTQ29318.1 - 0.0046 17.2 0.0 0.0046 17.2 0.0 1.8 2 1 0 2 2 2 1 4Fe-4S single cluster domain DUF1284 PF06935.11 CTQ29318.1 - 0.046 14.2 0.3 0.11 13.0 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1284) DUF3641 PF12345.8 CTQ29318.1 - 0.048 13.7 0.2 0.092 12.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3641) Sulfatase PF00884.23 CTQ29319.1 - 4.8e-42 144.4 0.7 8.1e-42 143.7 0.7 1.4 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 CTQ29319.1 - 3.6e-06 26.8 0.2 0.046 13.3 0.0 2.3 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4976 PF16347.5 CTQ29319.1 - 0.00025 21.3 0.2 0.00067 19.9 0.2 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4976) DUF229 PF02995.17 CTQ29319.1 - 0.0038 15.9 0.0 0.0055 15.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase_C PF14707.6 CTQ29319.1 - 0.0055 17.4 0.2 0.012 16.3 0.2 1.5 1 0 0 1 1 1 1 C-terminal region of aryl-sulfatase Metalloenzyme PF01676.18 CTQ29319.1 - 0.11 11.9 0.0 0.21 10.9 0.0 1.4 1 0 0 1 1 1 0 Metalloenzyme superfamily GMP_synt_C PF00958.22 CTQ29320.1 - 4.1e-44 148.5 0.0 1e-43 147.3 0.0 1.7 1 0 0 1 1 1 1 GMP synthase C terminal domain GATase PF00117.28 CTQ29320.1 - 3.3e-42 144.4 0.0 4.8e-42 143.9 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 CTQ29320.1 - 5.8e-10 39.3 0.0 1.2e-09 38.3 0.0 1.5 1 0 0 1 1 1 1 Peptidase C26 NAD_synthase PF02540.17 CTQ29320.1 - 6.9e-09 35.2 0.1 1.1e-06 27.9 0.1 2.3 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.16 CTQ29320.1 - 1.4e-05 24.1 0.1 6.7e-05 21.8 0.1 1.9 2 0 0 2 2 2 1 tRNA methyl transferase ThiI PF02568.14 CTQ29320.1 - 0.0031 17.1 0.1 0.0054 16.3 0.1 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 CTQ29320.1 - 0.0045 16.7 0.0 0.026 14.2 0.0 1.9 2 0 0 2 2 2 1 Asparagine synthase QueC PF06508.13 CTQ29320.1 - 0.01 15.4 0.0 2.9 7.4 0.0 2.5 3 0 0 3 3 3 0 Queuosine biosynthesis protein QueC SNO PF01174.19 CTQ29320.1 - 0.016 15.0 0.0 0.1 12.4 0.0 2.2 1 1 0 1 1 1 0 SNO glutamine amidotransferase family PAPS_reduct PF01507.19 CTQ29320.1 - 0.13 12.3 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.20 CTQ29320.1 - 0.16 11.7 0.0 0.33 10.7 0.0 1.7 1 0 0 1 1 1 0 PP-loop family IMPDH PF00478.25 CTQ29321.1 - 1.2e-160 534.2 8.3 1.4e-160 534.0 8.3 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 CTQ29321.1 - 2.6e-17 63.0 2.1 5.8e-09 36.3 0.1 3.6 2 1 1 3 3 3 2 CBS domain NMO PF03060.15 CTQ29321.1 - 9e-11 41.7 13.4 1.6e-05 24.5 8.2 2.4 1 1 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.18 CTQ29321.1 - 1.8e-08 33.8 8.2 2.3e-08 33.5 5.2 2.3 2 0 0 2 2 2 1 FMN-dependent dehydrogenase His_biosynth PF00977.21 CTQ29321.1 - 0.00039 19.9 4.0 0.0065 16.0 4.0 2.4 1 1 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.14 CTQ29321.1 - 0.0031 16.9 7.1 0.0031 16.9 7.1 2.5 4 0 0 4 4 4 1 Thiazole biosynthesis protein ThiG Glu_synthase PF01645.17 CTQ29321.1 - 0.0059 15.8 6.5 0.0059 15.8 6.5 1.7 2 0 0 2 2 2 1 Conserved region in glutamate synthase NanE PF04131.14 CTQ29321.1 - 0.0063 15.7 4.0 0.043 13.0 4.0 2.5 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase TMP-TENI PF02581.17 CTQ29321.1 - 0.0092 15.3 5.5 0.014 14.8 3.2 2.1 1 1 1 2 2 2 1 Thiamine monophosphate synthase Radical_SAM PF04055.21 CTQ29321.1 - 0.012 16.0 0.2 3 8.2 0.0 2.5 2 1 0 2 2 2 0 Radical SAM superfamily DHO_dh PF01180.21 CTQ29321.1 - 0.039 13.2 9.3 0.036 13.3 3.1 2.3 1 1 1 2 2 2 0 Dihydroorotate dehydrogenase PK PF00224.21 CTQ29321.1 - 0.19 10.6 2.5 0.5 9.2 0.0 2.4 3 0 0 3 3 3 0 Pyruvate kinase, barrel domain G3P_antiterm PF04309.12 CTQ29321.1 - 0.67 9.3 3.0 0.47 9.9 0.4 2.0 3 0 0 3 3 3 0 Glycerol-3-phosphate responsive antiterminator Aldolase PF01081.19 CTQ29321.1 - 1.1 8.6 5.6 0.47 9.8 0.7 2.5 2 1 1 3 3 3 0 KDPG and KHG aldolase Exonuc_VII_L PF02601.15 CTQ29322.1 - 2e-103 346.1 3.9 2.6e-103 345.8 3.9 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit tRNA_anti_2 PF13742.6 CTQ29322.1 - 6.9e-34 115.9 0.2 1.2e-32 111.9 0.0 2.4 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA_anti-codon PF01336.25 CTQ29322.1 - 7e-09 35.6 0.0 2e-08 34.1 0.0 1.9 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain bMG10 PF17973.1 CTQ29322.1 - 0.022 15.0 0.3 0.26 11.5 0.0 2.5 2 0 0 2 2 2 0 Bacterial Alpha-2-macroglobulin MG10 domain Glyco_tran_WecB PF03808.13 CTQ29322.1 - 0.067 13.1 0.4 4.8 7.1 0.1 2.5 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family DUF1508 PF07411.12 CTQ29322.1 - 0.12 12.2 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1508) DUF1987 PF09345.10 CTQ29322.1 - 0.17 11.5 0.1 0.86 9.3 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1987) zinc-ribbons_6 PF07191.12 CTQ29323.1 - 3.7e-28 97.3 5.2 4.1e-28 97.2 5.2 1.0 1 0 0 1 1 1 1 zinc-ribbons Nop10p PF04135.12 CTQ29323.1 - 0.003 17.6 1.0 0.0046 17.0 0.2 1.8 1 1 1 2 2 2 1 Nucleolar RNA-binding protein, Nop10p family DZR PF12773.7 CTQ29323.1 - 0.0059 16.6 9.3 0.08 13.0 9.3 2.3 1 1 0 1 1 1 1 Double zinc ribbon zf-RING_4 PF14570.6 CTQ29323.1 - 0.017 14.9 5.0 1 9.2 5.0 2.3 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain DNA_ligase_ZBD PF03119.16 CTQ29323.1 - 0.018 15.1 7.9 0.031 14.3 2.1 2.4 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Auto_anti-p27 PF06677.12 CTQ29323.1 - 0.09 13.0 8.2 1.3 9.2 1.3 2.2 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_4 PF13717.6 CTQ29323.1 - 0.12 12.3 10.3 3.2 7.7 1.2 3.6 2 1 0 3 3 3 0 zinc-ribbon domain DUF2614 PF11023.8 CTQ29323.1 - 0.14 12.3 4.0 0.69 10.0 0.3 2.1 1 1 1 2 2 2 0 Zinc-ribbon containing domain zf-ribbon_3 PF13248.6 CTQ29323.1 - 0.25 10.8 7.9 3.1 7.3 0.7 3.1 3 0 0 3 3 3 0 zinc-ribbon domain PolC_DP2 PF03833.13 CTQ29323.1 - 0.29 9.0 3.0 0.27 9.1 3.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DiS_P_DiS PF06750.13 CTQ29323.1 - 0.31 11.2 7.3 4.5 7.4 7.4 2.5 1 1 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain Rad50_zn_hook PF04423.14 CTQ29323.1 - 0.44 10.4 8.7 0.6 10.0 0.3 2.6 1 1 2 3 3 3 0 Rad50 zinc hook motif zf-CHY PF05495.12 CTQ29323.1 - 0.51 10.9 8.7 1.1 9.9 8.8 1.6 1 1 0 1 1 1 0 CHY zinc finger Trm112p PF03966.16 CTQ29323.1 - 0.92 10.1 8.3 7.5 7.2 0.4 2.7 1 1 0 2 2 2 0 Trm112p-like protein DUF2256 PF10013.9 CTQ29323.1 - 1.3 9.2 6.8 4.3 7.5 0.3 3.1 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) HypA PF01155.19 CTQ29323.1 - 1.5 8.9 8.3 2.1 8.4 7.5 1.8 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2396 PF09654.10 CTQ29323.1 - 1.9 8.6 4.6 0.31 11.2 0.4 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF2396) Zn-ribbon_8 PF09723.10 CTQ29323.1 - 2 8.6 14.5 1.2 9.4 5.1 3.4 2 1 1 3 3 3 0 Zinc ribbon domain zf-P11 PF03854.14 CTQ29323.1 - 2.1 8.1 9.7 5.5 6.7 1.1 3.0 2 1 1 3 3 3 0 P-11 zinc finger YacG PF03884.14 CTQ29323.1 - 2.4 8.0 7.9 8.7 6.2 1.0 2.5 2 1 0 2 2 2 0 DNA gyrase inhibitor YacG GFO_IDH_MocA PF01408.22 CTQ29324.1 - 3.3e-07 31.1 0.0 6.1e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold G6PD_N PF00479.22 CTQ29324.1 - 0.00057 20.6 0.0 0.00086 20.0 0.0 1.3 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain MMR_HSR1 PF01926.23 CTQ29325.1 - 8.5e-56 186.9 0.1 3e-28 98.2 0.0 2.4 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 CTQ29325.1 - 3e-32 111.3 0.0 1.2e-16 60.7 0.0 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B KH_dom-like PF14714.6 CTQ29325.1 - 2.3e-27 95.1 0.0 1.2e-26 92.9 0.0 2.1 2 0 0 2 2 2 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GTP_EFTU PF00009.27 CTQ29325.1 - 6e-21 74.9 0.4 1.3e-10 41.2 0.1 5.0 2 2 0 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 CTQ29325.1 - 1.4e-11 44.7 0.0 0.021 14.9 0.0 4.5 2 2 2 4 4 4 3 Dynamin family AIG1 PF04548.16 CTQ29325.1 - 6.7e-09 35.4 0.1 5.3e-05 22.6 0.1 2.4 2 0 0 2 2 2 2 AIG1 family RsgA_GTPase PF03193.16 CTQ29325.1 - 2.4e-08 34.1 0.0 0.037 13.9 0.0 3.9 4 0 0 4 4 4 2 RsgA GTPase Ras PF00071.22 CTQ29325.1 - 1.6e-06 27.9 0.0 0.0043 16.7 0.0 3.0 2 2 0 2 2 2 2 Ras family Roc PF08477.13 CTQ29325.1 - 3.5e-06 27.2 0.0 0.24 11.6 0.0 3.8 2 2 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase AAA_24 PF13479.6 CTQ29325.1 - 8.1e-05 22.4 0.0 0.2 11.4 0.0 3.1 2 2 0 2 2 2 2 AAA domain ABC_tran PF00005.27 CTQ29325.1 - 0.00013 22.5 0.0 0.54 10.8 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_22 PF13401.6 CTQ29325.1 - 0.00015 22.0 0.5 1.5 9.1 0.0 3.5 3 1 1 4 4 3 2 AAA domain PduV-EutP PF10662.9 CTQ29325.1 - 0.00035 20.3 0.0 1.9 8.3 0.0 3.6 2 2 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation cobW PF02492.19 CTQ29325.1 - 0.00058 19.5 4.4 0.39 10.3 0.3 3.9 2 2 2 4 4 4 1 CobW/HypB/UreG, nucleotide-binding domain TniB PF05621.11 CTQ29325.1 - 0.00075 18.9 0.0 0.89 8.9 0.0 2.5 2 1 0 2 2 2 2 Bacterial TniB protein ATP_bind_1 PF03029.17 CTQ29325.1 - 0.0012 18.7 0.0 0.16 11.7 0.0 3.5 3 1 0 4 4 4 1 Conserved hypothetical ATP binding protein NB-ARC PF00931.22 CTQ29325.1 - 0.0017 17.6 0.0 1.2 8.2 0.0 2.5 2 0 0 2 2 2 2 NB-ARC domain MeaB PF03308.16 CTQ29325.1 - 0.0017 17.4 0.2 6.8 5.6 0.0 3.5 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RNA_helicase PF00910.22 CTQ29325.1 - 0.0027 18.1 0.0 3.8 7.9 0.0 2.6 2 0 0 2 2 2 1 RNA helicase NTPase_1 PF03266.15 CTQ29325.1 - 0.0037 17.2 0.3 5 7.0 0.0 3.0 3 0 0 3 3 3 2 NTPase SRPRB PF09439.10 CTQ29325.1 - 0.0055 16.1 0.0 0.24 10.8 0.0 2.5 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit Nuc_deoxyri_tr2 PF15891.5 CTQ29325.1 - 0.0062 16.8 0.1 1.4 9.3 0.0 2.5 2 0 0 2 2 2 1 Nucleoside 2-deoxyribosyltransferase like SRP54 PF00448.22 CTQ29325.1 - 0.012 15.2 0.1 0.89 9.2 0.0 2.7 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain AAA_18 PF13238.6 CTQ29325.1 - 0.018 15.6 0.0 7.2 7.2 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 CTQ29325.1 - 0.022 14.9 0.0 4.5 7.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 CTQ29325.1 - 0.024 15.0 0.2 25 5.2 0.0 3.5 3 1 0 3 3 2 0 AAA ATPase domain AAA_25 PF13481.6 CTQ29325.1 - 0.037 13.6 0.3 21 4.6 0.0 3.7 3 1 0 3 3 3 0 AAA domain MMR_HSR1_Xtn PF16897.5 CTQ29325.1 - 0.039 14.0 0.0 4.5 7.3 0.0 2.4 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain AAA_29 PF13555.6 CTQ29325.1 - 0.052 13.3 0.0 14 5.5 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain Septin PF00735.18 CTQ29325.1 - 0.096 11.9 0.0 13 4.9 0.0 2.7 3 0 0 3 3 3 0 Septin Ploopntkinase3 PF18751.1 CTQ29325.1 - 0.099 12.5 0.0 1.9 8.4 0.0 2.4 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 NOG1 PF06858.14 CTQ29325.1 - 0.26 11.1 2.6 1.8 8.4 0.2 3.1 2 2 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) PQQ_2 PF13360.6 CTQ29326.1 - 5.4e-61 206.2 10.8 1.3e-54 185.3 8.3 2.4 1 1 1 2 2 2 2 PQQ-like domain PQQ_3 PF13570.6 CTQ29326.1 - 2.9e-39 132.5 22.3 1.9e-06 28.2 0.0 8.5 8 0 0 8 8 8 8 PQQ-like domain PQQ PF01011.21 CTQ29326.1 - 4.8e-38 127.3 10.4 1.5e-07 31.0 0.3 7.2 7 0 0 7 7 7 5 PQQ enzyme repeat LVIVD PF08309.11 CTQ29326.1 - 0.11 11.8 0.5 6 6.3 0.1 2.5 2 0 0 2 2 2 0 LVIVD repeat Biotin_lipoyl_2 PF13533.6 CTQ29326.1 - 0.13 12.1 0.1 17 5.3 0.1 2.8 2 0 0 2 2 2 0 Biotin-lipoyl like RHS_repeat PF05593.14 CTQ29326.1 - 1.6 9.4 4.3 38 4.9 0.0 3.8 3 0 0 3 3 3 0 RHS Repeat TPR_21 PF09976.9 CTQ29327.1 - 8.6e-57 192.0 8.2 9.7e-57 191.8 8.2 1.0 1 0 0 1 1 1 1 Tetratricopeptide repeat-like domain TPR_19 PF14559.6 CTQ29327.1 - 1.8e-05 25.2 7.3 4.7e-05 23.8 3.3 2.8 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 CTQ29327.1 - 9.5e-05 23.0 3.9 0.033 14.9 0.7 3.0 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_MalT PF17874.1 CTQ29327.1 - 0.0021 17.5 10.6 0.012 15.0 2.3 1.8 1 1 1 2 2 2 2 MalT-like TPR region TPR_2 PF07719.17 CTQ29327.1 - 0.014 15.5 4.6 1.4 9.2 0.0 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ29327.1 - 0.037 14.8 9.0 6.2 7.9 0.3 4.1 3 1 0 4 4 4 0 Tetratricopeptide repeat TPR_12 PF13424.6 CTQ29327.1 - 0.04 14.2 4.7 0.16 12.3 0.8 3.1 2 1 2 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 CTQ29327.1 - 3.3 8.6 6.9 2.2 9.1 0.1 3.2 4 0 0 4 4 4 0 Tetratricopeptide repeat tRNA-synt_His PF13393.6 CTQ29328.1 - 9.6e-46 156.5 0.0 1.2e-45 156.1 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 CTQ29328.1 - 1.2e-39 136.1 0.0 1.7e-39 135.6 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 CTQ29328.1 - 8.7e-11 41.8 0.1 2.2e-10 40.5 0.0 1.7 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2 PF00152.20 CTQ29328.1 - 0.00076 18.6 0.0 0.23 10.5 0.0 2.8 2 1 0 2 2 2 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 CTQ29328.1 - 0.0044 16.5 0.0 0.11 12.0 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) GcpE PF04551.14 CTQ29329.1 - 2e-131 438.3 0.1 2.3e-131 438.0 0.1 1.0 1 0 0 1 1 1 1 GcpE protein DUF4115 PF13464.6 CTQ29330.1 - 2.6e-23 82.0 0.0 5.1e-23 81.0 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4115) HTH_25 PF13413.6 CTQ29330.1 - 1e-14 54.1 0.3 1.7e-14 53.4 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 CTQ29330.1 - 2.3e-09 37.5 0.4 2.3e-09 37.5 0.4 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ29330.1 - 1.4e-06 28.2 0.0 3e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 CTQ29330.1 - 1.5e-06 28.2 0.0 2.5e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ29330.1 - 0.052 13.4 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_37 PF13744.6 CTQ29330.1 - 0.11 12.5 0.1 0.33 10.9 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain SOG2 PF10428.9 CTQ29330.1 - 4.6 6.3 9.8 6.4 5.9 9.8 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein Radical_SAM PF04055.21 CTQ29331.1 - 3.6e-16 60.0 0.1 9.3e-16 58.7 0.1 1.7 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 CTQ29331.1 - 0.0011 19.1 0.0 0.0023 18.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Sirohm_synth_C PF14823.6 CTQ29331.1 - 0.16 11.7 1.0 1.9 8.2 0.1 2.4 1 1 1 2 2 2 0 Sirohaem biosynthesis protein C-terminal NDK PF00334.19 CTQ29332.1 - 5.3e-54 181.9 0.0 5.9e-54 181.7 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Transgly PF00912.22 CTQ29333.1 - 2.6e-49 167.1 0.0 3.5e-49 166.7 0.0 1.2 1 0 0 1 1 1 1 Transglycosylase BiPBP_C PF06832.12 CTQ29333.1 - 8.6e-18 64.2 0.1 2.6e-17 62.7 0.1 1.9 1 0 0 1 1 1 1 Penicillin-Binding Protein C-terminus Family Transpeptidase PF00905.22 CTQ29333.1 - 2e-11 43.7 0.0 1.5e-10 40.7 0.0 1.9 1 1 0 1 1 1 1 Penicillin binding protein transpeptidase domain DUF2914 PF11141.8 CTQ29333.1 - 0.037 13.8 0.0 0.095 12.5 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2914) VirB8 PF04335.13 CTQ29333.1 - 0.13 12.1 0.3 0.22 11.3 0.3 1.2 1 0 0 1 1 1 0 VirB8 protein bMG1 PF17970.1 CTQ29334.1 - 3.5e-49 165.2 0.2 7.7e-49 164.1 0.2 1.6 1 0 0 1 1 1 1 Bacterial Alpha-2-macroglobulin MG1 domain bMG5 PF17972.1 CTQ29334.1 - 3.9e-44 150.1 0.6 7.3e-42 142.7 0.0 3.7 3 0 0 3 3 3 1 Bacterial Alpha-2-macroglobulin MG5 domain bMG6 PF17962.1 CTQ29334.1 - 5.9e-31 106.9 4.3 8.7e-31 106.4 2.1 2.5 3 0 0 3 3 2 1 Bacterial macroglobulin domain 6 bMG10 PF17973.1 CTQ29334.1 - 1.4e-29 102.9 0.0 3.8e-29 101.5 0.0 1.8 1 0 0 1 1 1 1 Bacterial Alpha-2-macroglobulin MG10 domain MG2 PF01835.19 CTQ29334.1 - 9.3e-23 80.5 0.0 5.9e-20 71.5 0.0 3.8 2 0 0 2 2 2 1 MG2 domain bMG3 PF11974.8 CTQ29334.1 - 7.2e-22 77.4 0.1 7.1e-21 74.2 0.1 2.7 2 0 0 2 2 2 1 Bacterial alpha-2-macroglobulin MG3 domain A2M_BRD PF07703.14 CTQ29334.1 - 3.7e-15 56.5 0.0 1.1e-14 55.0 0.0 1.9 1 0 0 1 1 1 1 Alpha-2-macroglobulin bait region domain A2M PF00207.22 CTQ29334.1 - 2.7e-08 33.5 0.0 7.1e-08 32.2 0.0 1.7 1 0 0 1 1 1 1 Alpha-2-macroglobulin family TED_complement PF07678.14 CTQ29334.1 - 3.4e-08 32.9 0.0 6.7e-08 31.9 0.0 1.4 1 0 0 1 1 1 1 A-macroglobulin TED domain Big_1 PF02369.16 CTQ29334.1 - 0.0015 18.5 0.1 0.1 12.7 0.0 3.4 2 0 0 2 2 2 1 Bacterial Ig-like domain (group 1) CarboxypepD_reg PF13620.6 CTQ29334.1 - 0.0047 17.2 0.0 0.82 10.0 0.0 4.3 3 0 0 3 3 3 1 Carboxypeptidase regulatory-like domain MG4 PF17789.1 CTQ29334.1 - 0.013 15.6 0.0 1.2 9.4 0.0 2.8 2 0 0 2 2 2 0 Macroglobulin domain MG4 DUF1513 PF07433.11 CTQ29334.1 - 0.1 11.7 0.1 1.3 8.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1513) SPDY PF03771.16 CTQ29334.1 - 0.14 12.1 0.8 2.2 8.3 0.1 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF317) Rhodanese PF00581.20 CTQ29335.1 - 2.2e-32 111.7 0.0 6.3e-17 62.0 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain AAA_25 PF13481.6 CTQ29336.1 - 0.15 11.6 0.3 0.3 10.6 0.1 1.6 2 0 0 2 2 2 0 AAA domain SseB_C PF14581.6 CTQ29337.1 - 2.8e-29 101.3 0.0 4.9e-29 100.6 0.0 1.4 1 0 0 1 1 1 1 SseB protein C-terminal domain SseB PF07179.12 CTQ29337.1 - 1e-25 90.4 0.6 1.5e-25 89.8 0.6 1.3 1 0 0 1 1 1 1 SseB protein N-terminal domain Peptidase_M17 PF00883.21 CTQ29338.1 - 6.9e-106 354.0 0.0 8.1e-106 353.8 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain DUF3663 PF12404.8 CTQ29338.1 - 5.6e-31 106.4 0.3 1.1e-30 105.5 0.3 1.5 1 0 0 1 1 1 1 Peptidase Fe-S_assembly PF04384.13 CTQ29339.1 - 1.5e-32 111.9 1.9 1.7e-32 111.8 1.9 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster assembly Fer2 PF00111.27 CTQ29340.1 - 9.3e-16 57.6 4.1 1.3e-15 57.1 4.1 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 CTQ29340.1 - 0.00085 19.3 0.9 0.0014 18.6 0.9 1.6 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain HSP70 PF00012.20 CTQ29341.1 - 3.8e-198 659.5 0.0 4.5e-198 659.2 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 CTQ29341.1 - 1.2e-14 53.9 0.1 3.6e-13 49.1 0.1 2.5 2 0 0 2 2 2 2 MreB/Mbl protein HSCB_C PF07743.13 CTQ29342.1 - 2.6e-17 63.1 7.3 8.4e-17 61.4 4.9 2.2 2 0 0 2 2 2 1 HSCB C-terminal oligomerisation domain DnaJ PF00226.31 CTQ29342.1 - 3.9e-07 30.1 0.1 6.8e-07 29.3 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain EF-hand_14 PF17959.1 CTQ29342.1 - 0.022 15.1 0.4 0.043 14.2 0.4 1.7 1 1 0 1 1 1 0 EF-hand domain Fe-S_biosyn PF01521.20 CTQ29343.1 - 3.4e-26 91.6 0.0 3.7e-26 91.5 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis NifU_N PF01592.16 CTQ29344.1 - 2.1e-57 192.8 0.2 2.3e-57 192.6 0.2 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain Aminotran_5 PF00266.19 CTQ29345.1 - 6.3e-89 298.5 0.0 7.5e-89 298.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 CTQ29345.1 - 6.8e-07 28.1 0.0 4.3e-06 25.5 0.0 1.9 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 CTQ29345.1 - 3.6e-05 23.2 0.1 4.6e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 CTQ29345.1 - 0.019 14.3 0.2 0.035 13.4 0.2 1.4 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Rrf2 PF02082.20 CTQ29346.1 - 3.2e-27 94.7 0.0 5.7e-27 93.9 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 CTQ29346.1 - 0.0086 15.9 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HrcA_DNA-bdg PF03444.15 CTQ29346.1 - 0.0096 15.6 0.3 0.017 14.8 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_24 PF13412.6 CTQ29346.1 - 0.015 14.9 0.0 0.038 13.5 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_47 PF16221.5 CTQ29346.1 - 0.075 12.6 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 winged helix-turn-helix HTH_AraC PF00165.23 CTQ29346.1 - 0.079 13.1 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family Fe_dep_repress PF01325.19 CTQ29346.1 - 0.18 12.0 0.0 0.4 10.9 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain SpoU_methylase PF00588.19 CTQ29347.1 - 1.7e-33 115.8 0.1 3e-33 115.0 0.1 1.4 2 0 0 2 2 2 1 SpoU rRNA Methylase family Methyltrn_RNA_4 PF09936.9 CTQ29347.1 - 0.00088 19.2 0.0 0.045 13.6 0.0 2.2 1 1 1 2 2 2 2 SAM-dependent RNA methyltransferase DUF531 PF04407.12 CTQ29347.1 - 0.073 13.2 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF531) Inositol_P PF00459.25 CTQ29348.1 - 5.6e-75 252.3 0.0 6.3e-75 252.2 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 CTQ29348.1 - 0.12 11.8 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 Fructose-1-6-bisphosphatase, N-terminal domain NicO PF03824.16 CTQ29350.1 - 8.3e-38 130.3 23.5 2.7e-35 122.1 18.8 2.6 2 1 0 2 2 2 1 High-affinity nickel-transport protein PAP_PilO PF06864.12 CTQ29350.1 - 4.6 6.0 7.1 0.96 8.2 0.9 2.1 2 0 0 2 2 2 0 Pilin accessory protein (PilO) DUF1007 PF06226.13 CTQ29351.1 - 9.4e-59 198.9 0.1 1.1e-58 198.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1007) PRD PF00874.20 CTQ29352.1 - 9e-18 64.4 0.0 2.5e-10 40.5 0.0 2.4 2 0 0 2 2 2 2 PRD domain DUF2996 PF11210.8 CTQ29352.1 - 0.092 13.2 0.0 0.31 11.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2996) MFS_1_like PF12832.7 CTQ29353.1 - 7.1e-44 150.2 31.6 2e-43 148.7 31.6 1.6 1 1 0 1 1 1 1 MFS_1 like family LacY_symp PF01306.19 CTQ29353.1 - 3.1e-15 55.9 22.5 4.8e-15 55.2 22.5 1.2 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1 PF07690.16 CTQ29353.1 - 2.2e-11 43.3 58.5 2.4e-08 33.3 46.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Nuc_H_symport PF03825.16 CTQ29353.1 - 7.5e-11 41.6 25.0 1e-10 41.2 25.0 1.1 1 0 0 1 1 1 1 Nucleoside H+ symporter Aldose_epim PF01263.20 CTQ29354.1 - 5.6e-18 65.3 0.0 7.4e-18 64.9 0.0 1.1 1 0 0 1 1 1 1 Aldose 1-epimerase Lipocalin_9 PF17186.4 CTQ29354.1 - 0.0061 16.8 0.0 0.015 15.5 0.0 1.6 1 1 1 2 2 2 1 Lipocalin-like domain DUF4384 PF14326.6 CTQ29354.1 - 0.027 14.6 0.0 0.075 13.2 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4384) Sugar_tr PF00083.24 CTQ29355.1 - 2e-111 373.1 21.7 2.3e-111 372.8 21.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 CTQ29355.1 - 3.3e-32 111.8 50.0 8.4e-22 77.6 20.9 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily ROK PF00480.20 CTQ29358.1 - 2.8e-36 125.5 0.0 3.6e-36 125.1 0.0 1.1 1 0 0 1 1 1 1 ROK family HTH_24 PF13412.6 CTQ29358.1 - 6.8e-05 22.3 0.3 0.00017 21.1 0.3 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ29358.1 - 0.0012 18.6 0.0 0.0027 17.5 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 CTQ29358.1 - 0.0021 18.0 0.1 0.0045 16.9 0.1 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_20 PF12840.7 CTQ29358.1 - 0.0035 17.4 0.1 0.0082 16.2 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 CTQ29358.1 - 0.0038 17.1 0.0 0.0077 16.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_37 PF13744.6 CTQ29358.1 - 0.024 14.6 0.1 0.085 12.8 0.1 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 CTQ29358.1 - 0.025 14.4 0.1 0.059 13.2 0.1 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain UPF0175 PF03683.13 CTQ29358.1 - 0.033 13.9 0.1 1.9 8.2 0.0 2.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0175) Phage_rep_O PF04492.13 CTQ29358.1 - 0.05 14.2 0.0 0.13 12.9 0.0 1.7 1 0 0 1 1 1 0 Bacteriophage replication protein O HTH_5 PF01022.20 CTQ29358.1 - 0.08 12.8 0.3 0.18 11.7 0.3 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DoxX PF07681.12 CTQ29359.1 - 9.1e-17 61.4 12.9 1.6e-16 60.7 12.9 1.4 1 0 0 1 1 1 1 DoxX SURF4 PF02077.15 CTQ29359.1 - 9.4e-09 35.2 5.4 2.4e-08 33.9 5.4 1.7 1 1 0 1 1 1 1 SURF4 family DUF2062 PF09835.9 CTQ29359.1 - 1.1 9.1 10.6 0.078 12.8 6.0 1.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2062) SHMT PF00464.19 CTQ29360.1 - 1e-189 630.3 0.4 1.1e-189 630.1 0.4 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 CTQ29360.1 - 3e-09 36.5 0.0 4.2e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 CTQ29360.1 - 0.00042 19.7 0.0 0.001 18.4 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.20 CTQ29360.1 - 0.00074 18.4 0.0 0.0024 16.7 0.0 1.7 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain NAD_binding_1 PF00175.21 CTQ29361.1 - 3e-17 63.2 0.0 5.6e-17 62.4 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain Globin PF00042.22 CTQ29361.1 - 6.8e-15 55.6 0.0 1.5e-14 54.4 0.0 1.6 1 0 0 1 1 1 1 Globin FAD_binding_6 PF00970.24 CTQ29361.1 - 7.1e-09 35.9 0.0 1.5e-08 34.9 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Protoglobin PF11563.8 CTQ29361.1 - 0.0004 20.3 0.0 0.00063 19.7 0.0 1.3 1 0 0 1 1 1 1 Protoglobin DUF1987 PF09345.10 CTQ29361.1 - 0.0062 16.2 0.0 0.021 14.5 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1987) BshC PF10079.9 CTQ29361.1 - 0.0085 14.9 0.0 0.012 14.4 0.0 1.1 1 0 0 1 1 1 1 Bacillithiol biosynthesis BshC P-II PF00543.22 CTQ29362.1 - 2.9e-44 149.8 4.0 3.3e-44 149.7 4.0 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Nit_Regul_Hom PF10126.9 CTQ29362.1 - 0.093 12.8 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII Sigma54_activat PF00158.26 CTQ29363.1 - 1.7e-72 242.6 0.0 9.1e-72 240.2 0.0 1.9 2 0 0 2 2 2 1 Sigma-54 interaction domain Response_reg PF00072.24 CTQ29363.1 - 7.4e-30 103.4 0.0 1.5e-29 102.5 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Sigma54_activ_2 PF14532.6 CTQ29363.1 - 4.6e-24 85.1 0.0 3.8e-23 82.2 0.0 2.5 2 1 0 2 2 2 1 Sigma-54 interaction domain AAA_5 PF07728.14 CTQ29363.1 - 1.6e-06 28.1 0.0 3e-06 27.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 CTQ29363.1 - 8.1e-05 23.1 0.0 0.00018 22.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 CTQ29363.1 - 0.0086 16.2 0.0 0.018 15.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) HTH_8 PF02954.19 CTQ29363.1 - 0.011 15.5 0.2 0.032 14.0 0.2 1.9 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family Mg_chelatase PF01078.21 CTQ29363.1 - 0.028 13.8 0.0 7.8 5.8 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI IDEAL PF08858.10 CTQ29363.1 - 0.054 13.2 1.3 0.13 12.0 0.1 2.3 2 0 0 2 2 2 0 IDEAL domain UPF0175 PF03683.13 CTQ29363.1 - 0.068 12.9 0.0 0.19 11.4 0.0 1.8 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0175) TIP49 PF06068.13 CTQ29363.1 - 0.074 12.2 0.0 0.14 11.3 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_16 PF13191.6 CTQ29363.1 - 0.11 12.8 0.1 0.39 11.1 0.1 2.1 1 1 1 2 2 2 0 AAA ATPase domain Glycos_transf_1 PF00534.20 CTQ29363.1 - 0.12 11.9 0.0 0.3 10.6 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 Lipoprotein_20 PF13942.6 CTQ29364.1 - 1.5e-76 256.2 4.7 1.8e-76 255.9 4.7 1.0 1 0 0 1 1 1 1 YfhG lipoprotein DUF5320 PF17253.2 CTQ29364.1 - 0.45 11.6 1.8 0.87 10.7 1.8 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5320) HATPase_c PF02518.26 CTQ29365.1 - 7.6e-17 61.8 0.0 1.4e-16 61.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ29365.1 - 7e-15 54.8 1.0 7e-15 54.8 1.0 2.4 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 CTQ29365.1 - 0.0057 16.5 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 GHKL domain DUF1098 PF06497.11 CTQ29365.1 - 0.0094 16.4 0.0 0.024 15.1 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1098) HATPase_c_2 PF13581.6 CTQ29365.1 - 0.013 15.5 0.0 0.029 14.3 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain 4HB_MCP_1 PF12729.7 CTQ29365.1 - 0.03 13.9 0.1 7.6 6.0 0.0 2.4 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction HAMP PF00672.25 CTQ29365.1 - 0.037 14.4 1.9 0.12 12.8 0.0 2.7 3 0 0 3 3 3 0 HAMP domain Clc-like PF07062.12 CTQ29365.1 - 0.043 13.3 0.3 0.11 11.9 0.0 1.7 2 0 0 2 2 2 0 Clc-like HR1 PF02185.16 CTQ29365.1 - 0.11 12.6 1.4 7.6 6.7 0.5 3.2 3 0 0 3 3 3 0 Hr1 repeat GATase_5 PF13507.6 CTQ29366.1 - 1.9e-103 345.1 0.0 3.1e-103 344.4 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain FGAR-AT_N PF18076.1 CTQ29366.1 - 5.8e-44 148.8 0.0 1.1e-43 147.8 0.0 1.5 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase N-terminal AIRS_C PF02769.22 CTQ29366.1 - 1.9e-43 148.3 2.6 5.7e-27 94.8 0.0 2.4 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain FGAR-AT_linker PF18072.1 CTQ29366.1 - 1.7e-23 82.8 0.0 5.6e-23 81.2 0.0 2.0 2 0 0 2 2 2 1 Formylglycinamide ribonucleotide amidotransferase linker domain AIRS PF00586.24 CTQ29366.1 - 0.082 13.6 3.8 0.74 10.5 0.0 3.7 4 0 0 4 4 4 0 AIR synthase related protein, N-terminal domain SBP_bac_3 PF00497.20 CTQ29367.1 - 2.5e-32 112.1 0.5 3.9e-32 111.5 0.5 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 SLT PF01464.20 CTQ29367.1 - 2.5e-23 81.9 0.0 4.6e-23 81.1 0.0 1.4 1 0 0 1 1 1 1 Transglycosylase SLT domain Lysozyme_like PF13702.6 CTQ29367.1 - 0.01 15.6 0.0 0.026 14.2 0.0 1.8 1 1 0 1 1 1 0 Lysozyme-like MafB19-deam PF14437.6 CTQ29368.1 - 2.4e-33 114.8 0.0 3.5e-33 114.3 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase dCMP_cyt_deam_1 PF00383.23 CTQ29368.1 - 1.9e-27 95.1 0.0 2.9e-27 94.5 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region SNAD4 PF18750.1 CTQ29368.1 - 0.0001 22.4 0.0 0.0006 19.9 0.0 1.9 2 0 0 2 2 2 1 Secreted Novel AID/APOBEC-like Deaminase 4 Bd3614-deam PF14439.6 CTQ29368.1 - 0.00045 20.3 0.0 0.00069 19.7 0.0 1.5 1 0 0 1 1 1 1 Bd3614-like deaminase APOBEC2 PF18772.1 CTQ29368.1 - 0.0078 16.3 0.0 0.015 15.3 0.0 1.4 2 0 0 2 2 2 1 APOBEC2 NAD2 PF18782.1 CTQ29368.1 - 0.011 15.9 0.0 0.021 15.0 0.0 1.4 2 0 0 2 2 2 0 Novel AID APOBEC clade 2 NAD1 PF18778.1 CTQ29368.1 - 0.011 15.8 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 APOBEC_N PF08210.11 CTQ29368.1 - 0.013 15.4 0.0 0.018 14.9 0.0 1.3 1 0 0 1 1 1 0 APOBEC-like N-terminal domain APOBEC3 PF18771.1 CTQ29368.1 - 0.023 14.8 0.0 0.12 12.5 0.0 1.9 2 0 0 2 2 2 0 APOBEC3 HAD PF12710.7 CTQ29369.1 - 1.7e-11 44.9 0.0 2.1e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HTH_6 PF01418.17 CTQ29370.1 - 8.5e-30 102.6 0.1 2.2e-29 101.3 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 CTQ29370.1 - 5.4e-29 100.7 0.8 8.2e-29 100.1 0.8 1.3 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 CTQ29370.1 - 1.4e-05 25.2 0.2 0.0011 19.0 0.0 2.5 1 1 1 2 2 2 1 SIS domain HTH_IclR PF09339.10 CTQ29370.1 - 0.0013 18.5 0.0 1.5 8.7 0.0 2.6 2 0 0 2 2 2 2 IclR helix-turn-helix domain DUF2388 PF09498.10 CTQ29370.1 - 0.0025 17.8 0.0 0.0095 15.9 0.0 2.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2388) Rrf2 PF02082.20 CTQ29370.1 - 0.025 14.9 0.6 0.8 10.1 0.0 2.7 3 0 0 3 3 3 0 Transcriptional regulator Fe_dep_repress PF01325.19 CTQ29370.1 - 0.078 13.2 0.0 5.9 7.2 0.0 2.5 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 CTQ29370.1 - 0.12 12.3 0.2 2.3 8.2 0.0 2.4 2 0 0 2 2 2 0 MarR family Fer4_7 PF12838.7 CTQ29371.1 - 9.9e-07 29.3 11.8 1.7e-06 28.5 11.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 CTQ29371.1 - 1.6e-06 27.7 16.4 4.4e-06 26.3 2.7 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 CTQ29371.1 - 5e-06 26.3 11.8 0.00095 19.1 2.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 CTQ29371.1 - 1.4e-05 25.1 11.6 2.8e-05 24.2 11.8 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain GF_recep_IV PF14843.6 CTQ29371.1 - 0.00014 21.7 6.6 0.00017 21.4 6.6 1.1 1 0 0 1 1 1 1 Growth factor receptor domain IV Fer4_21 PF14697.6 CTQ29371.1 - 0.00016 21.7 13.8 0.0003 20.8 13.8 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ29371.1 - 0.00045 20.3 14.4 0.002 18.2 14.8 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ29371.1 - 0.006 16.6 16.7 0.042 13.9 4.8 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 CTQ29371.1 - 0.02 15.8 14.5 0.025 15.5 6.7 2.3 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 CTQ29371.1 - 0.023 15.2 2.6 0.023 15.2 2.6 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 CTQ29371.1 - 0.057 13.9 13.2 28 5.3 13.2 2.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 CTQ29371.1 - 0.11 13.1 14.3 0.16 12.5 5.6 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 CTQ29371.1 - 0.36 10.6 12.6 0.063 13.1 1.7 2.1 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_3 PF12798.7 CTQ29371.1 - 0.67 11.0 16.0 2.8 9.1 3.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain ACPS PF01648.20 CTQ29372.1 - 2e-24 85.9 0.0 2.3e-24 85.7 0.0 1.0 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily Tecti-min-caps PF09300.10 CTQ29372.1 - 0.025 14.6 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 Tectiviridae, minor capsid PdxJ PF03740.13 CTQ29373.1 - 7.6e-109 362.3 3.9 8.6e-109 362.1 3.9 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthesis protein PdxJ AP_endonuc_2 PF01261.24 CTQ29373.1 - 0.00015 21.3 2.2 0.0015 18.0 2.2 2.4 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel RecO_N PF11967.8 CTQ29374.1 - 5.2e-23 80.8 0.0 8.2e-23 80.2 0.0 1.3 1 0 0 1 1 1 1 Recombination protein O N terminal RecO_C PF02565.15 CTQ29374.1 - 5.7e-23 81.5 0.1 1.1e-22 80.6 0.1 1.5 1 1 0 1 1 1 1 Recombination protein O C terminal MMR_HSR1 PF01926.23 CTQ29375.1 - 1.6e-24 86.1 0.1 3.3e-24 85.1 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase KH_2 PF07650.17 CTQ29375.1 - 4.7e-20 71.2 0.5 1.9e-19 69.2 0.8 2.0 2 0 0 2 2 1 1 KH domain FeoB_N PF02421.18 CTQ29375.1 - 3.3e-15 56.0 0.3 5.1e-15 55.3 0.3 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 CTQ29375.1 - 5.9e-09 35.7 1.2 1.3e-06 28.1 1.2 2.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 CTQ29375.1 - 3e-08 33.7 1.3 0.00029 20.8 0.1 2.3 1 1 1 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 CTQ29375.1 - 6.1e-08 32.9 0.5 8.4e-05 22.7 0.2 2.3 1 1 1 2 2 2 2 Dynamin family AIG1 PF04548.16 CTQ29375.1 - 2.1e-07 30.5 0.0 3.5e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 AIG1 family PduV-EutP PF10662.9 CTQ29375.1 - 7.8e-06 25.7 0.3 8.3e-05 22.4 0.3 2.2 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation Ras PF00071.22 CTQ29375.1 - 0.00021 20.9 0.1 0.0067 16.0 0.1 2.7 2 1 0 2 2 2 1 Ras family AAA_22 PF13401.6 CTQ29375.1 - 0.00024 21.4 0.0 0.00048 20.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain Roc PF08477.13 CTQ29375.1 - 0.0057 16.9 1.0 0.059 13.6 0.4 2.5 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase DUF521 PF04412.13 CTQ29375.1 - 0.012 14.3 0.0 0.018 13.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) cobW PF02492.19 CTQ29375.1 - 0.016 14.8 2.0 0.69 9.5 0.2 2.3 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1_Xtn PF16897.5 CTQ29375.1 - 0.017 15.1 0.0 0.036 14.1 0.0 1.6 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain SRPRB PF09439.10 CTQ29375.1 - 0.023 14.1 0.0 0.043 13.2 0.0 1.5 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit ABC_tran PF00005.27 CTQ29375.1 - 0.057 13.9 0.3 0.085 13.4 0.3 1.6 1 1 0 1 1 1 0 ABC transporter NB-ARC PF00931.22 CTQ29375.1 - 0.058 12.6 0.0 0.45 9.7 0.0 2.1 2 0 0 2 2 2 0 NB-ARC domain PcrB PF01884.17 CTQ29375.1 - 0.073 12.5 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 PcrB family AAA_16 PF13191.6 CTQ29375.1 - 0.12 12.8 0.3 0.42 11.0 0.2 2.1 2 1 0 2 2 2 0 AAA ATPase domain Ribonucleas_3_3 PF14622.6 CTQ29376.1 - 2.8e-34 118.0 0.0 4e-34 117.5 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.26 CTQ29376.1 - 3.8e-20 72.5 0.0 7.7e-20 71.5 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease III domain dsrm PF00035.26 CTQ29376.1 - 6.1e-15 55.7 0.0 1e-14 55.0 0.0 1.4 1 0 0 1 1 1 1 Double-stranded RNA binding motif DND1_DSRM PF14709.7 CTQ29376.1 - 9.1e-06 25.8 0.0 1.7e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 double strand RNA binding domain from DEAD END PROTEIN 1 Peptidase_S24 PF00717.23 CTQ29377.1 - 7.4e-21 73.9 0.2 1.3e-20 73.1 0.2 1.4 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 CTQ29377.1 - 6.9e-09 35.6 0.0 5.4e-07 29.5 0.0 2.6 2 1 0 2 2 2 2 Signal peptidase, peptidase S26 GTP_EFTU PF00009.27 CTQ29378.1 - 1.2e-52 178.3 0.1 2.5e-52 177.3 0.1 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain LepA_C PF06421.12 CTQ29378.1 - 1.1e-49 167.1 1.4 1.7e-49 166.4 1.4 1.3 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus EFG_C PF00679.24 CTQ29378.1 - 2.4e-19 69.1 0.0 5.3e-19 68.1 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 CTQ29378.1 - 9e-12 45.2 0.4 2.1e-11 44.1 0.4 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CTQ29378.1 - 3.6e-05 23.8 0.0 0.00016 21.7 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase EFG_II PF14492.6 CTQ29378.1 - 0.0002 21.3 0.0 0.00072 19.6 0.0 1.9 1 1 0 1 1 1 1 Elongation Factor G, domain II Ras PF00071.22 CTQ29378.1 - 0.0005 19.7 0.0 0.00091 18.9 0.0 1.4 1 0 0 1 1 1 1 Ras family RF3_C PF16658.5 CTQ29378.1 - 0.04 13.7 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain SRPRB PF09439.10 CTQ29378.1 - 0.081 12.4 0.0 0.19 11.1 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit RseC_MucC PF04246.12 CTQ29379.1 - 1.6e-33 115.4 0.8 1.8e-33 115.2 0.8 1.0 1 0 0 1 1 1 1 Positive regulator of sigma(E), RseC/MucC MucB_RseB PF03888.14 CTQ29380.1 - 4.6e-60 202.2 0.0 6.6e-60 201.7 0.0 1.2 1 0 0 1 1 1 1 MucB/RseB N-terminal domain MucB_RseB_C PF17188.4 CTQ29380.1 - 1e-27 96.2 0.0 1.8e-27 95.4 0.0 1.4 1 0 0 1 1 1 1 MucB/RseB C-terminal domain LolA_like PF17131.4 CTQ29380.1 - 9.5e-05 22.2 0.0 0.00015 21.5 0.0 1.2 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein RseA_N PF03872.13 CTQ29381.1 - 2.1e-36 124.2 1.0 2.1e-36 124.2 1.0 1.9 2 0 0 2 2 2 1 Anti sigma-E protein RseA, N-terminal domain RseA_C PF03873.13 CTQ29381.1 - 9.1e-26 89.9 1.5 9.1e-26 89.9 1.5 3.3 3 1 1 4 4 4 1 Anti sigma-E protein RseA, C-terminal domain RskA PF10099.9 CTQ29381.1 - 0.042 14.1 9.6 0.11 12.8 9.6 1.7 1 1 0 1 1 1 0 Anti-sigma-K factor rskA Sigma70_r4_2 PF08281.12 CTQ29382.1 - 1.8e-19 69.1 0.2 4.8e-19 67.8 0.2 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 CTQ29382.1 - 6e-18 64.4 0.3 1.2e-17 63.4 0.3 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 CTQ29382.1 - 6.2e-11 41.6 0.0 1.6e-10 40.3 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 CTQ29382.1 - 1.3e-08 35.0 0.2 5.2e-08 33.0 0.2 1.9 1 1 0 1 1 1 1 ECF sigma factor HTH_23 PF13384.6 CTQ29382.1 - 0.0002 21.1 0.0 0.00053 19.7 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain FAD_binding_2 PF00890.24 CTQ29384.1 - 4.7e-102 342.2 2.1 5.6e-102 341.9 2.1 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 CTQ29384.1 - 9.7e-14 51.5 0.0 2.2e-13 50.3 0.0 1.6 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 CTQ29384.1 - 1.4e-10 40.9 1.4 1.2e-05 24.7 0.2 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 CTQ29384.1 - 7.7e-10 38.9 6.6 4.2e-09 36.4 6.5 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase GMC_oxred_N PF00732.19 CTQ29384.1 - 0.00053 19.4 0.5 0.83 9.0 0.1 2.2 2 0 0 2 2 2 2 GMC oxidoreductase Thi4 PF01946.17 CTQ29384.1 - 0.00057 19.2 5.3 0.27 10.4 0.3 3.2 3 1 1 4 4 4 2 Thi4 family FAD_binding_3 PF01494.19 CTQ29384.1 - 0.00094 18.5 0.2 0.0017 17.7 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 CTQ29384.1 - 0.0018 17.0 0.3 0.12 11.1 0.1 2.9 3 0 0 3 3 3 1 HI0933-like protein Lycopene_cycl PF05834.12 CTQ29384.1 - 0.0025 16.9 0.1 0.0043 16.2 0.1 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein NAD_binding_8 PF13450.6 CTQ29384.1 - 0.0027 17.9 0.2 0.0088 16.3 0.2 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 CTQ29384.1 - 0.035 13.4 0.2 0.11 11.7 0.1 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ29384.1 - 0.055 12.5 1.4 0.77 8.8 1.4 2.1 1 1 0 1 1 1 0 Glucose inhibited division protein A K_oxygenase PF13434.6 CTQ29384.1 - 0.056 12.6 0.2 1.3 8.1 0.1 2.1 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Retrotrans_gag PF03732.17 CTQ29384.1 - 0.081 13.2 0.0 0.2 11.9 0.0 1.6 1 0 0 1 1 1 0 Retrotransposon gag protein NAD_binding_9 PF13454.6 CTQ29384.1 - 0.12 12.4 0.3 1.7 8.7 0.1 2.5 2 0 0 2 2 2 0 FAD-NAD(P)-binding MTS PF05175.14 CTQ29385.1 - 1.9e-13 50.3 0.0 3.9e-13 49.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 CTQ29385.1 - 5.4e-11 43.1 0.0 3.2e-10 40.6 0.0 2.0 1 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ29385.1 - 1.9e-09 37.5 0.0 4.3e-09 36.3 0.0 1.5 1 1 1 2 2 2 1 Methyltransferase domain PrmA PF06325.13 CTQ29385.1 - 9.2e-07 28.5 0.0 1.4e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_3 PF01596.17 CTQ29385.1 - 2.4e-06 26.9 0.0 3.5e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_32 PF13679.6 CTQ29385.1 - 3e-06 27.3 0.0 3.9e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ29385.1 - 7.9e-06 26.4 0.0 0.00013 22.5 0.0 2.1 1 1 0 2 2 2 1 Methyltransferase domain UPF0020 PF01170.18 CTQ29385.1 - 1.7e-05 24.6 0.0 2.1e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 RrnaAD PF00398.20 CTQ29385.1 - 2.6e-05 23.5 0.0 3e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_23 PF13489.6 CTQ29385.1 - 6.6e-05 22.8 0.0 0.00062 19.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 CTQ29385.1 - 8e-05 22.4 0.0 0.00011 21.9 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PCMT PF01135.19 CTQ29385.1 - 0.00017 21.4 0.0 0.00025 20.9 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PRMT5 PF05185.16 CTQ29385.1 - 0.00076 19.4 0.0 0.0011 18.9 0.0 1.1 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase Methyltransf_12 PF08242.12 CTQ29385.1 - 0.0099 16.6 0.0 0.031 15.0 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.7 CTQ29385.1 - 0.02 14.8 0.0 0.042 13.8 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_24 PF13578.6 CTQ29385.1 - 0.044 14.8 0.0 0.079 14.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 CTQ29385.1 - 0.072 12.4 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_10 PF05971.12 CTQ29385.1 - 0.077 12.3 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 RNA methyltransferase FtsJ PF01728.19 CTQ29385.1 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_16 PF10294.9 CTQ29385.1 - 0.15 11.8 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Met_10 PF02475.16 CTQ29385.1 - 0.22 11.2 0.0 0.28 10.9 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein DEAD PF00270.29 CTQ29386.1 - 3.9e-47 160.3 0.1 2e-46 157.9 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CTQ29386.1 - 3.2e-32 111.2 0.0 3.6e-30 104.6 0.0 2.5 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CTQ29386.1 - 9e-09 35.6 0.1 1.9e-08 34.5 0.0 1.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 CTQ29386.1 - 8.8e-05 22.9 0.2 0.00033 21.0 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ29386.1 - 0.017 15.4 0.1 0.065 13.5 0.0 2.0 1 1 1 2 2 2 0 AAA domain CMS1 PF14617.6 CTQ29386.1 - 0.053 12.9 0.0 0.053 12.9 0.0 2.6 2 0 0 2 2 2 0 U3-containing 90S pre-ribosomal complex subunit Shikimate_DH PF01488.20 CTQ29386.1 - 0.11 12.6 0.2 1.9 8.5 0.0 2.4 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Gly_radical PF01228.21 CTQ29387.1 - 9.4e-23 80.8 0.0 1.8e-22 79.9 0.0 1.5 2 0 0 2 2 2 1 Glycine radical UDG PF03167.19 CTQ29388.1 - 2e-27 96.1 0.0 2.9e-27 95.6 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily SpoU_methylase PF00588.19 CTQ29389.1 - 3.4e-32 111.5 0.0 5.2e-32 111.0 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 CTQ29389.1 - 4.3e-13 49.3 0.0 9.8e-13 48.2 0.0 1.6 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding Thioredoxin PF00085.20 CTQ29390.1 - 6.1e-27 93.6 0.0 2.4e-26 91.7 0.0 1.8 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_2 PF13098.6 CTQ29390.1 - 2.2e-10 40.9 0.6 2e-09 37.9 0.1 2.2 2 1 0 2 2 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 CTQ29390.1 - 3.9e-06 27.1 0.0 0.0003 21.1 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_7 PF13899.6 CTQ29390.1 - 1.3e-05 25.3 0.1 0.0002 21.5 0.0 2.2 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_9 PF14595.6 CTQ29390.1 - 9.1e-05 22.2 0.0 0.00011 22.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 CTQ29390.1 - 0.00016 21.1 0.0 0.00018 20.9 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Redoxin PF08534.10 CTQ29390.1 - 0.00054 19.7 0.0 0.0014 18.4 0.0 1.6 1 1 1 2 2 2 1 Redoxin zinc_ribbon_4 PF13717.6 CTQ29390.1 - 0.00082 19.3 0.2 0.0019 18.1 0.2 1.7 1 0 0 1 1 1 1 zinc-ribbon domain Thioredoxin_3 PF13192.6 CTQ29390.1 - 0.00098 19.1 0.1 0.0063 16.5 0.0 2.1 2 0 0 2 2 2 1 Thioredoxin domain TraF PF13728.6 CTQ29390.1 - 0.0021 17.9 0.0 0.0027 17.6 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein HyaE PF07449.11 CTQ29390.1 - 0.0025 17.7 0.0 0.0038 17.2 0.0 1.3 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE zinc_ribbon_13 PF09855.9 CTQ29390.1 - 0.0095 16.1 0.0 0.02 15.1 0.0 1.7 1 0 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) AhpC-TSA PF00578.21 CTQ29390.1 - 0.01 15.8 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA family Thioredoxin_6 PF13848.6 CTQ29390.1 - 0.076 12.9 0.0 0.089 12.7 0.0 1.3 1 1 0 1 1 1 0 Thioredoxin-like domain zinc_ribbon_5 PF13719.6 CTQ29390.1 - 0.41 10.5 3.0 0.33 10.7 0.5 2.0 2 0 0 2 2 2 0 zinc-ribbon domain DTW PF03942.15 CTQ29391.1 - 5.2e-40 137.3 0.0 6e-40 137.1 0.0 1.0 1 0 0 1 1 1 1 DTW domain ATP-grasp_5 PF13549.6 CTQ29392.1 - 2.3e-76 256.1 0.4 2.3e-75 252.8 0.1 2.3 2 0 0 2 2 2 1 ATP-grasp domain Succ_CoA_lig PF13607.6 CTQ29392.1 - 5.4e-46 155.8 0.1 9.6e-46 155.0 0.1 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 CTQ29392.1 - 1.4e-21 77.1 0.0 3e-20 72.8 0.0 2.9 2 0 0 2 2 2 1 CoA binding domain Acetyltransf_1 PF00583.25 CTQ29392.1 - 3.6e-08 33.7 0.0 8.6e-08 32.4 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 CTQ29392.1 - 4.5e-08 33.9 0.0 1.1e-07 32.6 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ29392.1 - 0.00027 21.1 0.0 0.92 9.6 0.0 2.3 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ29392.1 - 0.00095 19.1 0.0 0.0021 18.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain CoA_binding PF02629.19 CTQ29392.1 - 0.0075 16.9 0.0 0.023 15.4 0.0 1.8 2 0 0 2 2 2 1 CoA binding domain Acetyltransf_7 PF13508.7 CTQ29392.1 - 0.021 15.3 0.0 0.05 14.0 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ29392.1 - 0.031 14.2 0.0 0.16 12.0 0.0 2.1 2 0 0 2 2 2 0 FR47-like protein OKR_DC_1_N PF03709.15 CTQ29392.1 - 0.15 12.3 0.1 3.4 8.0 0.0 3.0 3 0 0 3 3 3 0 Orn/Lys/Arg decarboxylase, N-terminal domain PLDc_2 PF13091.6 CTQ29393.1 - 1.2e-29 102.8 0.0 4.4e-21 75.2 0.0 2.3 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 CTQ29393.1 - 3.2e-13 49.3 1.5 3.8e-07 30.0 0.1 2.6 2 0 0 2 2 2 2 Phospholipase D Active site motif Phage_tail_APC PF16778.5 CTQ29393.1 - 0.0016 18.3 0.2 0.0056 16.5 0.2 2.0 1 0 0 1 1 1 1 Phage tail assembly chaperone protein DUF2279 PF10043.9 CTQ29394.1 - 1.1e-09 39.0 0.6 1.3e-09 38.7 0.6 1.1 1 0 0 1 1 1 1 Predicted periplasmic lipoprotein (DUF2279) Sugar_tr PF00083.24 CTQ29395.1 - 1.2e-35 123.3 35.3 2.4e-25 89.3 9.9 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 CTQ29395.1 - 6.9e-24 84.4 46.4 1e-15 57.6 17.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 CTQ29395.1 - 2.2e-07 29.8 35.4 0.0042 15.7 19.3 4.4 1 1 2 3 3 3 3 MFS/sugar transport protein MFS_1_like PF12832.7 CTQ29395.1 - 3.4e-06 26.2 14.2 0.00087 18.2 6.3 3.8 2 2 1 3 3 3 2 MFS_1 like family AzlD PF05437.12 CTQ29395.1 - 0.047 13.9 0.4 0.047 13.9 0.4 4.6 3 1 2 5 5 5 0 Branched-chain amino acid transport protein (AzlD) AAA_2 PF07724.14 CTQ29396.1 - 7.7e-58 195.4 0.0 2.4e-55 187.3 0.0 2.8 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 CTQ29396.1 - 1.5e-35 121.2 4.6 1.5e-35 121.2 4.6 3.3 3 1 1 4 4 3 1 AAA lid domain ClpB_D2-small PF10431.9 CTQ29396.1 - 2.2e-28 98.1 0.2 2.2e-28 98.1 0.2 2.6 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein Clp_N PF02861.20 CTQ29396.1 - 1.7e-27 95.3 2.1 7.5e-14 51.6 0.2 3.5 3 0 0 3 3 3 2 Clp amino terminal domain, pathogenicity island component AAA PF00004.29 CTQ29396.1 - 1.6e-26 93.3 0.0 1.6e-13 51.2 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 CTQ29396.1 - 1e-18 67.6 0.0 5e-13 49.2 0.0 3.2 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CTQ29396.1 - 3.1e-12 47.2 7.9 3.9e-05 24.1 0.1 5.5 5 2 1 6 6 5 2 AAA ATPase domain Sigma54_activat PF00158.26 CTQ29396.1 - 2.9e-09 36.9 0.0 3.6e-06 26.8 0.0 3.1 2 2 0 2 2 2 1 Sigma-54 interaction domain AAA_22 PF13401.6 CTQ29396.1 - 3.6e-08 33.8 6.0 0.013 15.7 0.2 5.0 3 2 0 3 3 3 2 AAA domain TniB PF05621.11 CTQ29396.1 - 1.3e-06 28.0 0.1 0.012 15.1 0.0 4.0 2 2 1 3 3 3 1 Bacterial TniB protein AAA_18 PF13238.6 CTQ29396.1 - 1.7e-06 28.6 0.4 0.41 11.2 0.0 4.6 4 0 0 4 4 4 2 AAA domain RuvB_N PF05496.12 CTQ29396.1 - 2e-06 27.6 0.1 0.48 10.2 0.0 4.7 5 0 0 5 5 5 1 Holliday junction DNA helicase RuvB P-loop domain IstB_IS21 PF01695.17 CTQ29396.1 - 1.3e-05 25.1 0.1 0.045 13.5 0.0 3.0 3 0 0 3 3 2 2 IstB-like ATP binding protein AAA_14 PF13173.6 CTQ29396.1 - 5.5e-05 23.2 0.0 0.61 10.1 0.0 3.6 3 0 0 3 3 3 1 AAA domain ATPase_2 PF01637.18 CTQ29396.1 - 5.9e-05 23.1 0.9 2.2 8.1 0.1 4.3 3 2 0 4 4 3 1 ATPase domain predominantly from Archaea AAA_24 PF13479.6 CTQ29396.1 - 6.3e-05 22.8 0.0 0.038 13.7 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 CTQ29396.1 - 7.8e-05 22.3 0.0 0.2 11.2 0.0 2.7 3 0 0 3 3 2 2 P-loop containing dynein motor region Roc PF08477.13 CTQ29396.1 - 0.0002 21.5 0.0 0.71 10.1 0.0 2.5 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase RNA_helicase PF00910.22 CTQ29396.1 - 0.0003 21.1 0.0 1.1 9.6 0.0 3.1 3 0 0 3 3 2 2 RNA helicase TsaE PF02367.17 CTQ29396.1 - 0.00057 19.9 0.0 1.7 8.7 0.0 3.3 3 0 0 3 3 3 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 CTQ29396.1 - 0.00069 19.6 0.0 1.5 8.7 0.0 2.8 2 0 0 2 2 2 2 RsgA GTPase Mg_chelatase PF01078.21 CTQ29396.1 - 0.0012 18.3 0.2 3 7.2 0.0 3.5 2 1 1 3 3 3 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 CTQ29396.1 - 0.0017 18.3 0.0 0.16 11.9 0.0 2.6 2 0 0 2 2 2 1 NACHT domain AAA_3 PF07726.11 CTQ29396.1 - 0.0021 17.9 0.1 1.5 8.7 0.0 3.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF815 PF05673.13 CTQ29396.1 - 0.0023 17.1 0.3 0.54 9.4 0.0 3.2 3 1 0 3 3 3 1 Protein of unknown function (DUF815) AAA_28 PF13521.6 CTQ29396.1 - 0.0024 18.1 2.1 1.5 9.0 0.3 4.1 3 1 1 4 4 3 1 AAA domain ABC_tran PF00005.27 CTQ29396.1 - 0.0079 16.7 2.4 3.1 8.3 0.0 3.7 3 1 0 3 3 3 1 ABC transporter ResIII PF04851.15 CTQ29396.1 - 0.012 15.6 0.0 9.7 6.2 0.0 3.4 2 1 0 3 3 3 0 Type III restriction enzyme, res subunit AAA_25 PF13481.6 CTQ29396.1 - 0.013 15.1 0.0 0.51 9.9 0.0 3.0 3 0 0 3 3 2 0 AAA domain Zeta_toxin PF06414.12 CTQ29396.1 - 0.013 14.8 0.0 2.3 7.4 0.0 2.9 3 0 0 3 3 2 0 Zeta toxin AAA_19 PF13245.6 CTQ29396.1 - 0.015 15.7 0.1 0.84 10.0 0.1 3.2 3 1 0 3 3 3 0 AAA domain ATP_bind_1 PF03029.17 CTQ29396.1 - 0.024 14.4 0.3 1.3 8.8 0.0 3.0 3 0 0 3 3 2 0 Conserved hypothetical ATP binding protein NTPase_1 PF03266.15 CTQ29396.1 - 0.025 14.5 0.0 4.9 7.0 0.0 2.9 2 0 0 2 2 2 0 NTPase AAA_33 PF13671.6 CTQ29396.1 - 0.033 14.4 0.0 18 5.5 0.0 3.1 2 0 0 2 2 2 0 AAA domain DNA_pol3_delta2 PF13177.6 CTQ29396.1 - 0.045 13.5 0.0 11 5.7 0.0 2.7 2 0 0 2 2 2 0 DNA polymerase III, delta subunit AAA_29 PF13555.6 CTQ29396.1 - 0.054 13.2 0.0 11 5.9 0.0 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain SRP54 PF00448.22 CTQ29396.1 - 0.062 12.9 0.0 2.2 7.9 0.0 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain PduV-EutP PF10662.9 CTQ29396.1 - 0.1 12.3 0.0 1.9 8.2 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Torsin PF06309.11 CTQ29396.1 - 0.21 11.7 0.0 0.59 10.2 0.0 1.7 1 0 0 1 1 1 0 Torsin Cu-oxidase_4 PF02578.15 CTQ29397.1 - 4e-80 268.7 0.0 4.5e-80 268.6 0.0 1.0 1 0 0 1 1 1 1 Multi-copper polyphenol oxidoreductase laccase PseudoU_synth_2 PF00849.22 CTQ29398.1 - 3.2e-30 105.3 0.0 4.4e-30 104.9 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 CTQ29398.1 - 2e-10 40.2 0.0 3.4e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 S4 domain TruB_N PF01509.18 CTQ29398.1 - 0.06 13.7 0.0 0.1 13.0 0.0 1.3 1 0 0 1 1 1 0 TruB family pseudouridylate synthase (N terminal domain) YfiO PF13525.6 CTQ29399.1 - 4.6e-84 281.2 4.8 5.5e-84 281.0 4.8 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein TPR_18 PF13512.6 CTQ29399.1 - 1.8e-69 232.5 6.7 5.2e-69 231.0 3.8 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 CTQ29399.1 - 0.00015 21.9 0.3 0.45 10.8 0.0 2.8 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 CTQ29399.1 - 0.011 15.9 0.1 4.1 7.6 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 CTQ29399.1 - 0.012 16.3 9.5 0.34 11.7 0.1 4.5 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_21 PF09976.9 CTQ29399.1 - 0.022 14.5 2.0 0.03 14.0 0.1 2.1 2 1 1 3 3 3 0 Tetratricopeptide repeat-like domain TPR_16 PF13432.6 CTQ29399.1 - 0.029 15.0 0.7 0.92 10.2 0.1 2.7 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ29399.1 - 0.039 14.8 0.1 7.4 7.7 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 CTQ29399.1 - 0.049 14.1 1.7 0.36 11.4 0.9 2.7 1 1 1 2 2 2 0 Tetratricopeptide repeat Ribosomal_S30AE PF02482.19 CTQ29400.1 - 3.2e-22 79.1 0.0 3.7e-22 78.9 0.0 1.1 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein PDT PF00800.18 CTQ29401.1 - 5.6e-61 205.6 0.2 8.1e-61 205.0 0.2 1.2 1 0 0 1 1 1 1 Prephenate dehydratase CM_2 PF01817.21 CTQ29401.1 - 1.6e-17 63.6 1.4 2.9e-17 62.8 1.4 1.4 1 0 0 1 1 1 1 Chorismate mutase type II WWE PF02825.20 CTQ29401.1 - 0.079 13.6 0.0 0.17 12.5 0.0 1.5 1 0 0 1 1 1 0 WWE domain SGL PF08450.12 CTQ29402.1 - 3.4e-74 249.5 0.0 3.9e-74 249.3 0.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 CTQ29402.1 - 0.033 14.3 0.0 0.074 13.2 0.0 1.6 2 0 0 2 2 2 0 Strictosidine synthase Arylesterase PF01731.20 CTQ29402.1 - 0.068 13.4 0.0 5.3 7.3 0.0 2.4 2 0 0 2 2 2 0 Arylesterase PDH PF02153.17 CTQ29403.1 - 3.1e-30 105.0 0.0 7.8e-30 103.7 0.0 1.6 2 0 0 2 2 2 1 Prephenate dehydrogenase CM_2 PF01817.21 CTQ29403.1 - 1.3e-20 73.5 0.2 3.2e-20 72.3 0.1 1.7 2 0 0 2 2 2 1 Chorismate mutase type II F420_oxidored PF03807.17 CTQ29403.1 - 0.0028 18.2 1.8 1.5 9.4 1.3 3.5 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NmrA PF05368.13 CTQ29403.1 - 0.0047 16.5 0.0 0.0071 15.9 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family Rhodanese PF00581.20 CTQ29403.1 - 0.053 14.1 0.0 19 5.8 0.0 2.4 2 0 0 2 2 2 0 Rhodanese-like domain DAHP_synth_1 PF00793.20 CTQ29404.1 - 2.2e-107 358.0 0.0 2.7e-107 357.7 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family DUF4154 PF13689.6 CTQ29405.1 - 1.1e-30 106.8 0.0 1.2e-30 106.6 0.0 1.0 1 0 0 1 1 1 1 YfiR/HmsC-like GGDEF PF00990.21 CTQ29406.1 - 5e-44 149.9 0.2 8.6e-44 149.1 0.2 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain CHASE8 PF17152.4 CTQ29406.1 - 7.8e-31 106.4 0.1 2.5e-30 104.7 0.1 1.9 1 0 0 1 1 1 1 Periplasmic sensor domain Prominin PF05478.11 CTQ29406.1 - 0.075 11.0 0.8 0.54 8.2 0.1 2.0 2 0 0 2 2 2 0 Prominin GAPES3 PF17154.4 CTQ29406.1 - 0.12 12.4 0.0 0.32 11.0 0.0 1.7 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain OmpA PF00691.20 CTQ29407.1 - 3.9e-19 68.8 0.1 5.4e-19 68.4 0.1 1.2 1 0 0 1 1 1 1 OmpA family LPAM_1 PF08139.12 CTQ29407.1 - 0.12 12.9 0.1 0.26 11.9 0.1 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site MLTD_N PF06474.12 CTQ29407.1 - 1.1 9.5 4.7 0.22 11.7 1.1 1.7 2 0 0 2 2 2 0 MltD lipid attachment motif PepSY_TM PF03929.16 CTQ29408.1 - 8e-58 196.4 14.9 1.3e-57 195.7 14.9 1.3 1 0 0 1 1 1 1 PepSY-associated TM region DUF423 PF04241.15 CTQ29408.1 - 0.1 12.8 1.7 0.17 12.1 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF423) DUF2946 PF11162.8 CTQ29409.1 - 6.4e-18 65.5 14.7 1.5e-17 64.3 14.7 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2946) Virul_fac_BrkB PF03631.15 CTQ29409.1 - 0.033 13.8 0.2 0.46 10.1 0.0 2.0 2 0 0 2 2 2 0 Virulence factor BrkB Ribosomal_L19 PF01245.20 CTQ29410.1 - 1.1e-49 167.0 3.7 1.2e-49 166.9 3.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L19 MG2 PF01835.19 CTQ29410.1 - 0.098 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 MG2 domain tRNA_m1G_MT PF01746.21 CTQ29411.1 - 5.4e-72 241.6 0.0 6.5e-72 241.3 0.0 1.1 1 0 0 1 1 1 1 tRNA (Guanine-1)-methyltransferase RimM PF01782.18 CTQ29412.1 - 2.5e-26 91.7 0.0 3.7e-26 91.2 0.0 1.3 1 0 0 1 1 1 1 RimM N-terminal domain PRC PF05239.16 CTQ29412.1 - 9.5e-10 38.4 0.5 1.9e-09 37.5 0.5 1.5 1 0 0 1 1 1 1 PRC-barrel domain DUF2846 PF11008.8 CTQ29412.1 - 0.17 11.9 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2846) Ribosomal_S16 PF00886.19 CTQ29413.1 - 1.3e-24 86.0 0.1 1.6e-24 85.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S16 AAA_26 PF13500.6 CTQ29413.1 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 CTQ29414.1 - 1.2e-75 253.5 0.3 1.8e-75 252.9 0.3 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 CTQ29414.1 - 7.1e-33 113.2 5.0 7.1e-33 113.2 5.0 3.4 3 1 1 4 4 4 1 Signal peptide binding domain SRP54_N PF02881.19 CTQ29414.1 - 7.5e-22 77.4 2.9 1.1e-21 76.9 0.2 2.7 3 0 0 3 3 3 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 CTQ29414.1 - 3.4e-07 30.4 0.0 1.5e-06 28.3 0.0 2.3 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zeta_toxin PF06414.12 CTQ29414.1 - 3.5e-05 23.2 0.1 7.4e-05 22.1 0.1 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_30 PF13604.6 CTQ29414.1 - 0.00035 20.3 0.8 0.00096 18.9 0.5 2.0 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 CTQ29414.1 - 0.0013 18.3 1.0 0.0068 16.0 1.0 2.1 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_31 PF13614.6 CTQ29414.1 - 0.0015 18.5 0.4 0.012 15.5 0.1 2.2 1 1 1 2 2 2 1 AAA domain AAA_22 PF13401.6 CTQ29414.1 - 0.0052 17.1 0.0 0.017 15.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 CTQ29414.1 - 0.01 15.7 0.1 0.018 14.9 0.1 1.4 1 0 0 1 1 1 1 Helicase AAA_33 PF13671.6 CTQ29414.1 - 0.011 15.9 0.0 0.022 14.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain Peptidase_C23 PF05379.11 CTQ29414.1 - 0.017 15.2 0.0 5.5 7.2 0.0 2.7 2 0 0 2 2 2 0 Carlavirus endopeptidase AAA_24 PF13479.6 CTQ29414.1 - 0.02 14.7 0.0 0.041 13.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 CTQ29414.1 - 0.032 14.1 0.1 0.15 12.0 0.0 2.1 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_16 PF13191.6 CTQ29414.1 - 0.12 12.8 0.1 0.34 11.3 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 CTQ29414.1 - 0.21 11.7 1.0 1.4 9.0 0.5 2.6 1 1 1 2 2 2 0 50S ribosome-binding GTPase KTI12 PF08433.10 CTQ29414.1 - 0.31 10.4 1.9 0.76 9.2 0.1 2.1 2 0 0 2 2 2 0 Chromatin associated protein KTI12 Cytochrom_C_asm PF01578.20 CTQ29415.1 - 1.6e-43 148.9 18.8 1.6e-43 148.9 18.8 1.5 1 1 0 1 1 1 1 Cytochrome C assembly protein DUF1686 PF07937.11 CTQ29415.1 - 0.022 14.6 1.1 0.085 12.7 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1686) DUF21 PF01595.20 CTQ29416.1 - 5.7e-50 169.4 2.3 8.5e-50 168.9 2.3 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 CTQ29416.1 - 4.1e-19 68.4 0.1 1e-18 67.1 0.1 1.7 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 CTQ29416.1 - 1.2e-06 28.9 0.7 2.4e-05 24.7 0.1 2.9 1 1 1 2 2 2 1 CBS domain DUF4239 PF14023.6 CTQ29416.1 - 0.071 12.8 0.1 0.13 11.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) GrpE PF01025.19 CTQ29417.1 - 8.8e-47 158.9 6.0 1.2e-46 158.5 6.0 1.3 1 1 0 1 1 1 1 GrpE Csm1_N PF18504.1 CTQ29417.1 - 0.019 15.3 1.4 0.054 13.8 1.4 1.8 1 0 0 1 1 1 0 Csm1 N-terminal domain ADK PF00406.22 CTQ29417.1 - 0.11 12.6 2.2 0.16 12.1 0.7 1.8 2 0 0 2 2 2 0 Adenylate kinase DMSP_lyase PF16867.5 CTQ29417.1 - 0.24 11.0 1.5 7.1 6.2 0.0 2.2 1 1 1 2 2 2 0 Dimethlysulfonioproprionate lyase PKcGMP_CC PF16808.5 CTQ29417.1 - 0.36 10.7 3.3 1.1 9.1 1.3 2.6 1 1 1 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase NAD_kinase PF01513.21 CTQ29418.1 - 1.2e-75 254.4 0.0 1.5e-75 254.1 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase Rdx PF10262.9 CTQ29418.1 - 0.15 12.3 0.0 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 Rdx family AAA_23 PF13476.6 CTQ29419.1 - 1e-18 68.6 1.7 1.8e-17 64.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 CTQ29419.1 - 2.1e-18 66.6 0.0 5.1e-18 65.3 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ29419.1 - 7.1e-06 25.7 0.0 1.8e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 CTQ29419.1 - 0.00093 19.1 0.3 1.1 9.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 CTQ29419.1 - 0.0018 18.1 0.0 0.0081 15.9 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain ABC_tran PF00005.27 CTQ29419.1 - 0.0033 17.9 2.4 1.1 9.8 0.0 3.4 3 1 0 3 3 3 1 ABC transporter AAA_22 PF13401.6 CTQ29419.1 - 0.0056 17.0 6.8 0.15 12.3 2.1 4.1 2 2 0 3 3 3 1 AAA domain NTPase_P4 PF11602.8 CTQ29419.1 - 0.051 12.8 0.0 0.08 12.1 0.0 1.2 1 0 0 1 1 1 0 ATPase P4 of dsRNA bacteriophage phi-12 DUF812 PF05667.11 CTQ29419.1 - 5.9 5.7 12.1 8.9 5.1 12.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) SmpA_OmlA PF04355.13 CTQ29420.1 - 8.4e-27 92.8 0.3 1.1e-26 92.5 0.3 1.1 1 0 0 1 1 1 1 SmpA / OmlA family Sulfolobus_pRN PF05584.11 CTQ29420.1 - 0.094 12.8 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein Ub-RnfH PF03658.14 CTQ29421.1 - 1.7e-33 114.8 0.2 2e-33 114.6 0.2 1.0 1 0 0 1 1 1 1 RnfH family Ubiquitin Polyketide_cyc PF03364.20 CTQ29422.1 - 1.3e-30 106.3 0.0 1.5e-30 106.1 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 CTQ29422.1 - 2.3e-08 34.4 0.0 2.7e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport RNase_PH PF01138.21 CTQ29422.1 - 0.13 12.8 0.0 0.18 12.3 0.0 1.2 1 0 0 1 1 1 0 3' exoribonuclease family, domain 1 SmpB PF01668.18 CTQ29423.1 - 9.6e-56 187.7 0.1 1.1e-55 187.5 0.1 1.0 1 0 0 1 1 1 1 SmpB protein DUF4824 PF16106.5 CTQ29423.1 - 0.063 12.5 0.0 0.092 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4824) PepSY_2 PF13670.6 CTQ29423.1 - 0.067 13.2 0.1 0.32 11.0 0.1 2.0 1 1 1 2 2 2 0 Peptidase propeptide and YPEB domain NTP_transf_2 PF01909.23 CTQ29424.1 - 0.0059 16.9 0.0 0.0088 16.3 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 CTQ29424.1 - 0.025 14.7 0.0 0.046 13.8 0.0 1.4 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase LysR_substrate PF03466.20 CTQ29425.1 - 3.8e-45 153.8 1.7 5.3e-45 153.4 1.7 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29425.1 - 1.6e-17 63.2 0.2 3.1e-17 62.3 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HemN_C PF06969.16 CTQ29425.1 - 0.092 12.8 0.0 0.69 10.0 0.0 2.4 3 0 0 3 3 3 0 HemN C-terminal domain Flavin_Reduct PF01613.18 CTQ29426.1 - 3.2e-08 33.8 0.0 4.1e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Flavin reductase like domain HTH_18 PF12833.7 CTQ29427.1 - 3.1e-23 81.8 0.1 4e-23 81.5 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ29427.1 - 7.2e-16 57.8 0.0 9.3e-08 32.0 0.0 2.2 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family PP2C PF00481.21 CTQ29427.1 - 0.11 12.1 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein phosphatase 2C Arm_2 PF04826.13 CTQ29427.1 - 0.15 11.4 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 Armadillo-like HTH_Tnp_ISL3 PF13542.6 CTQ29427.1 - 0.17 11.3 1.1 0.33 10.4 0.1 2.0 3 0 0 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 Biotin_lipoyl_2 PF13533.6 CTQ29428.1 - 1.7e-20 72.5 2.9 1.1e-17 63.6 0.2 3.0 3 0 0 3 3 3 2 Biotin-lipoyl like HlyD_D23 PF16576.5 CTQ29428.1 - 1e-17 64.1 2.2 2.1e-17 63.0 2.2 1.5 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 CTQ29428.1 - 8e-11 42.6 0.7 2.8e-05 24.8 0.0 3.4 3 1 0 3 3 3 2 HlyD family secretion protein Biotin_lipoyl PF00364.22 CTQ29428.1 - 0.004 16.9 0.0 0.075 12.9 0.0 2.4 2 0 0 2 2 2 1 Biotin-requiring enzyme ACR_tran PF00873.19 CTQ29429.1 - 0 1143.6 10.4 0 1143.4 10.4 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 CTQ29429.1 - 1.8e-12 46.8 32.1 4e-10 39.1 14.9 2.5 2 0 0 2 2 2 2 MMPL family SecD_SecF PF02355.16 CTQ29429.1 - 0.00038 19.9 15.5 0.00038 19.9 15.5 2.4 2 0 0 2 2 2 1 Protein export membrane protein Patched PF02460.18 CTQ29429.1 - 0.41 8.7 14.8 0.84 7.6 14.8 1.5 1 0 0 1 1 1 0 Patched family Rrf2 PF02082.20 CTQ29430.1 - 1.5e-13 50.9 0.0 2.3e-13 50.3 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator LysR_substrate PF03466.20 CTQ29431.1 - 1.8e-30 105.9 0.0 2.6e-30 105.4 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29431.1 - 1.4e-17 63.4 0.4 4e-17 61.9 0.4 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_23 PF13384.6 CTQ29431.1 - 0.019 14.7 0.0 0.057 13.2 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain Arginase PF00491.21 CTQ29432.1 - 1.1e-82 277.7 0.0 1.3e-82 277.4 0.0 1.0 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.7 CTQ29432.1 - 0.2 11.9 0.1 0.29 11.3 0.1 1.2 1 0 0 1 1 1 0 UPF0489 domain AP_endonuc_2 PF01261.24 CTQ29433.1 - 2.2e-08 33.8 0.0 3.1e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel YobH PF13996.6 CTQ29433.1 - 0.0068 16.4 0.0 1.4 9.0 0.0 2.3 2 0 0 2 2 2 2 YobH-like protein DIOX_N PF14226.6 CTQ29434.1 - 1.3e-32 113.1 0.0 2.3e-32 112.2 0.0 1.5 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal 2OG-FeII_Oxy PF03171.20 CTQ29434.1 - 1.6e-15 57.4 0.0 5e-15 55.8 0.0 1.7 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily SBP_bac_3 PF00497.20 CTQ29435.1 - 3.1e-44 151.1 0.0 3.8e-44 150.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 ABC_tran PF00005.27 CTQ29436.1 - 4.2e-32 111.5 0.0 7.2e-32 110.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter BPD_transp_1 PF00528.22 CTQ29436.1 - 8.3e-15 55.0 15.2 8.3e-15 55.0 15.2 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component AAA_21 PF13304.6 CTQ29436.1 - 8.1e-11 42.3 0.3 2.3e-05 24.3 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ29436.1 - 3.8e-07 29.8 0.3 0.00049 19.6 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ29436.1 - 0.00038 20.1 0.1 0.001 18.8 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 CTQ29436.1 - 0.0012 19.1 0.2 0.0087 16.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 CTQ29436.1 - 0.0021 18.4 0.3 0.0053 17.1 0.1 1.9 2 1 0 2 2 1 1 AAA ATPase domain AAA_33 PF13671.6 CTQ29436.1 - 0.0026 17.9 0.0 0.0051 17.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 CTQ29436.1 - 0.0075 16.8 0.1 0.0075 16.8 0.1 1.4 2 0 0 2 2 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ29436.1 - 0.0079 16.1 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 CTQ29436.1 - 0.0089 15.8 0.0 0.019 14.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 CTQ29436.1 - 0.013 14.4 1.5 4.1 6.1 0.2 2.9 2 1 0 2 2 2 0 Predicted ATPase of the ABC class ATPase_2 PF01637.18 CTQ29436.1 - 0.016 15.1 0.0 0.032 14.1 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 CTQ29436.1 - 0.027 13.6 0.1 0.045 12.9 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA PF00004.29 CTQ29436.1 - 0.028 14.8 0.0 2.3 8.6 0.0 2.4 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 CTQ29436.1 - 0.048 13.4 0.1 0.091 12.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 CTQ29436.1 - 0.057 13.1 0.3 1.5 8.5 0.2 2.0 2 0 0 2 2 2 0 AAA ATPase domain PhoH PF02562.16 CTQ29436.1 - 0.071 12.6 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_18 PF13238.6 CTQ29436.1 - 0.084 13.4 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 CTQ29436.1 - 0.09 12.4 0.1 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.22 CTQ29436.1 - 0.09 12.4 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain PRK PF00485.18 CTQ29436.1 - 0.092 12.5 0.2 0.15 11.8 0.2 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_28 PF13521.6 CTQ29436.1 - 0.098 12.9 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 CTQ29436.1 - 0.13 12.6 0.0 0.27 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ29436.1 - 0.14 12.0 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_13 PF13166.6 CTQ29436.1 - 0.17 10.5 0.1 7.6 5.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 CTQ29436.1 - 0.22 11.4 0.2 0.55 10.1 0.1 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Aldolase_II PF00596.21 CTQ29437.1 - 3.7e-47 160.7 0.1 4.9e-47 160.3 0.1 1.2 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain 2-Hacid_dh_C PF02826.19 CTQ29438.1 - 2.6e-43 147.4 0.0 3.4e-43 147.1 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 CTQ29438.1 - 4.1e-07 30.3 0.0 6.5e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh PF00389.30 CTQ29438.1 - 0.0032 17.1 0.0 0.0098 15.6 0.0 1.7 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ApbA PF02558.16 CTQ29438.1 - 0.0033 17.1 0.3 0.0056 16.3 0.3 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 CTQ29438.1 - 0.012 16.2 0.1 0.029 14.9 0.1 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent ThiF PF00899.21 CTQ29438.1 - 0.062 12.6 0.0 0.13 11.6 0.0 1.5 1 0 0 1 1 1 0 ThiF family 3HCDH_N PF02737.18 CTQ29438.1 - 0.071 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 CTQ29438.1 - 0.16 11.9 0.1 0.29 11.1 0.1 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus adh_short PF00106.25 CTQ29439.1 - 3.2e-43 147.5 0.3 5.3e-43 146.8 0.3 1.3 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ29439.1 - 1.3e-39 136.2 2.9 3.2e-39 134.9 2.9 1.5 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ29439.1 - 1.8e-07 31.3 0.4 3.3e-07 30.4 0.4 1.4 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ29439.1 - 0.001 18.6 0.3 0.0024 17.4 0.0 1.7 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 CTQ29439.1 - 0.0025 17.7 0.8 0.047 13.6 0.2 2.1 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 CTQ29439.1 - 0.022 15.3 3.1 0.11 13.1 0.3 2.5 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent TMEM220 PF15071.6 CTQ29440.1 - 1.3 9.8 6.6 0.33 11.7 1.0 2.3 2 1 0 2 2 2 0 Transmembrane family 220, helix SBP_bac_3 PF00497.20 CTQ29441.1 - 5.1e-46 156.9 0.1 6.1e-46 156.6 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 GerE PF00196.19 CTQ29442.1 - 6.7e-13 48.0 0.0 1.2e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Fimbrial PF00419.20 CTQ29443.1 - 3e-17 63.3 0.8 3.6e-17 63.1 0.8 1.1 1 0 0 1 1 1 1 Fimbrial protein Invasin_D3 PF09134.10 CTQ29443.1 - 0.26 11.6 3.2 0.95 9.8 0.6 2.7 1 1 1 2 2 2 0 Invasin, domain 3 PapD_N PF00345.20 CTQ29444.1 - 4.5e-39 133.2 0.2 1e-38 132.0 0.0 1.6 2 0 0 2 2 2 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 CTQ29444.1 - 1.3e-07 31.8 0.1 3.4e-07 30.5 0.1 1.8 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain 2H-phosphodiest PF08975.10 CTQ29444.1 - 0.16 11.9 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1868) Usher PF00577.20 CTQ29445.1 - 9.5e-176 585.9 23.2 1.2e-175 585.6 23.2 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_N PF13954.6 CTQ29445.1 - 2.1e-31 108.9 0.0 6.4e-31 107.3 0.0 1.9 2 0 0 2 2 2 1 PapC N-terminal domain PapC_C PF13953.6 CTQ29445.1 - 3.9e-14 52.2 0.9 1.3e-13 50.5 0.0 2.4 3 0 0 3 3 3 1 PapC C-terminal domain Pertactin PF03212.14 CTQ29445.1 - 0.016 15.1 0.3 0.048 13.6 0.1 1.9 2 0 0 2 2 2 0 Pertactin Fimbrial PF00419.20 CTQ29446.1 - 7.3e-13 49.0 1.3 3.1e-11 43.7 0.1 2.2 2 0 0 2 2 2 2 Fimbrial protein Usher PF00577.20 CTQ29448.1 - 3.3e-183 610.5 20.8 3.9e-183 610.3 20.8 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_N PF13954.6 CTQ29448.1 - 4.8e-41 140.2 0.0 1e-40 139.1 0.0 1.6 1 0 0 1 1 1 1 PapC N-terminal domain PapC_C PF13953.6 CTQ29448.1 - 1e-18 66.9 0.4 8.1e-18 64.0 0.0 2.7 2 0 0 2 2 2 1 PapC C-terminal domain PapD_N PF00345.20 CTQ29449.1 - 4.8e-42 142.8 0.1 6.3e-42 142.4 0.1 1.1 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 CTQ29449.1 - 3.6e-17 62.5 0.3 7.8e-17 61.4 0.3 1.6 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain Fimbrial PF00419.20 CTQ29450.1 - 2e-17 63.8 3.7 2e-17 63.8 3.7 1.5 2 0 0 2 2 2 1 Fimbrial protein FimA PF16970.5 CTQ29450.1 - 1.4e-07 31.8 3.7 1.4e-07 31.8 3.7 1.6 1 1 1 2 2 2 1 Type-1 fimbrial protein, A Aldedh PF00171.22 CTQ29452.1 - 4.1e-162 539.9 0.0 4.6e-162 539.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Sigma54_activat PF00158.26 CTQ29453.1 - 6.6e-57 191.9 0.0 1e-56 191.2 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 CTQ29453.1 - 4.5e-16 59.2 0.0 1.5e-15 57.5 0.0 1.9 1 1 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 CTQ29453.1 - 3.4e-10 39.5 0.4 9.4e-10 38.1 0.4 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family GAF PF01590.26 CTQ29453.1 - 7.7e-06 26.6 0.3 3.1e-05 24.6 0.1 2.1 3 0 0 3 3 2 1 GAF domain AAA_5 PF07728.14 CTQ29453.1 - 0.0002 21.4 0.0 0.00052 20.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) HTH_30 PF13556.6 CTQ29453.1 - 0.0019 17.9 0.4 0.006 16.4 0.4 1.9 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain Mg_chelatase PF01078.21 CTQ29453.1 - 0.0045 16.4 0.0 0.016 14.6 0.0 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI HTH_23 PF13384.6 CTQ29453.1 - 0.01 15.6 0.2 0.034 14.0 0.2 1.8 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.6 CTQ29453.1 - 0.036 14.1 0.1 0.11 12.6 0.1 1.9 1 0 0 1 1 1 0 Winged helix-turn helix AAA_3 PF07726.11 CTQ29453.1 - 0.074 12.9 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) HTH_17 PF12728.7 CTQ29453.1 - 0.088 13.0 0.1 0.19 12.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_psq PF05225.16 CTQ29453.1 - 0.092 12.5 0.1 0.23 11.2 0.1 1.6 1 0 0 1 1 1 0 helix-turn-helix, Psq domain IFR3_antag PF14754.6 CTQ29453.1 - 0.14 11.4 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 Papain-like auto-proteinase HTH_1 PF00126.27 CTQ29453.1 - 0.14 12.1 1.2 0.4 10.7 0.2 2.3 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 CTQ29454.1 - 4.2e-41 140.6 6.8 8.3e-41 139.7 6.4 1.6 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29454.1 - 2.6e-17 62.5 3.7 2.9e-17 62.3 1.6 2.2 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ29454.1 - 0.043 13.6 1.8 0.23 11.3 0.2 2.5 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Flavodoxin_2 PF02525.17 CTQ29455.1 - 3.7e-40 137.7 0.0 4.3e-40 137.6 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 CTQ29455.1 - 1.1e-08 34.9 0.0 1.4e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase HTH_5 PF01022.20 CTQ29456.1 - 1.4e-15 56.9 0.0 2e-15 56.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 CTQ29456.1 - 5.6e-12 45.0 0.0 8.5e-12 44.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ29456.1 - 1e-11 44.5 0.3 1.5e-10 40.8 0.1 2.2 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 CTQ29456.1 - 7.7e-11 41.9 1.1 1.4e-10 41.1 1.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 CTQ29456.1 - 1.9e-07 30.9 0.0 3.3e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 CTQ29456.1 - 1.2e-05 25.0 0.4 2.7e-05 23.9 0.3 1.7 1 1 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ29456.1 - 1.4e-05 24.9 0.1 2.5e-05 24.2 0.1 1.4 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_AsnC-type PF13404.6 CTQ29456.1 - 2.9e-05 23.8 0.3 4.8e-05 23.1 0.3 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Rrf2 PF02082.20 CTQ29456.1 - 0.00047 20.4 0.0 0.00085 19.6 0.0 1.5 2 0 0 2 2 1 1 Transcriptional regulator HTH_10 PF04967.12 CTQ29456.1 - 0.0022 17.8 0.0 0.0043 16.8 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain Fe_dep_repress PF01325.19 CTQ29456.1 - 0.0035 17.5 0.0 0.0087 16.2 0.0 1.6 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain LexA_DNA_bind PF01726.16 CTQ29456.1 - 0.0047 16.7 0.1 0.0075 16.0 0.1 1.4 1 0 0 1 1 1 1 LexA DNA binding domain HTH_1 PF00126.27 CTQ29456.1 - 0.011 15.6 0.2 0.22 11.5 0.1 2.2 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_11 PF08279.12 CTQ29456.1 - 0.012 15.6 0.0 0.041 13.8 0.0 1.8 2 0 0 2 2 2 0 HTH domain AbiEi_4 PF13338.6 CTQ29456.1 - 0.015 15.5 0.1 0.029 14.5 0.1 1.4 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin RP-C PF03428.13 CTQ29456.1 - 0.017 14.8 0.1 0.043 13.5 0.0 1.6 2 0 0 2 2 2 0 Replication protein C N-terminal domain HTH_34 PF13601.6 CTQ29456.1 - 0.046 13.9 0.0 0.062 13.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_27 PF13463.6 CTQ29456.1 - 0.063 13.8 0.0 0.09 13.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain TrmB PF01978.19 CTQ29456.1 - 0.066 13.1 0.0 0.12 12.3 0.0 1.4 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 CTQ29456.1 - 0.089 12.7 0.0 0.14 12.0 0.0 1.3 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_29 PF13551.6 CTQ29456.1 - 0.09 12.8 0.1 0.41 10.7 0.0 1.9 1 1 0 2 2 2 0 Winged helix-turn helix HTH_28 PF13518.6 CTQ29456.1 - 0.095 12.8 0.0 0.22 11.7 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MerR PF00376.23 CTQ29456.1 - 0.12 12.2 0.1 1.3 8.9 0.0 2.2 2 0 0 2 2 2 0 MerR family regulatory protein Rhodanese PF00581.20 CTQ29457.1 - 2e-12 47.6 0.0 3.4e-12 46.8 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain DUF2892 PF11127.8 CTQ29457.1 - 3e-11 43.2 6.8 3e-11 43.2 6.8 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2892) FliMN_C PF01052.20 CTQ29457.1 - 0.14 12.2 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Type III flagellar switch regulator (C-ring) FliN C-term Asp_Arg_Hydrox PF05118.15 CTQ29458.1 - 1.5e-47 161.3 0.0 2.1e-47 160.9 0.0 1.2 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase Cupin_2 PF07883.11 CTQ29458.1 - 0.0076 15.9 0.0 0.03 14.0 0.0 1.8 2 0 0 2 2 2 1 Cupin domain MliC PF09864.9 CTQ29459.1 - 0.016 15.2 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 Membrane-bound lysozyme-inhibitor of c-type lysozyme Histone_HNS PF00816.21 CTQ29460.1 - 1e-19 71.1 7.0 1.3e-19 70.8 6.5 1.4 1 1 0 1 1 1 1 H-NS histone family Pex19 PF04614.12 CTQ29460.1 - 0.021 14.6 1.5 0.035 13.9 0.3 1.7 1 1 1 2 2 2 0 Pex19 protein family ATPgrasp_Ter PF15632.6 CTQ29460.1 - 0.023 14.5 0.1 0.032 14.0 0.1 1.2 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon DUF3037 PF11236.8 CTQ29460.1 - 0.074 13.5 0.2 0.1 13.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3037) DcpS_C PF11969.8 CTQ29460.1 - 0.084 13.4 0.3 0.12 12.9 0.3 1.2 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme C-term binding Vps39_2 PF10367.9 CTQ29460.1 - 0.24 11.9 0.9 0.3 11.5 0.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 AlaE PF06610.13 CTQ29462.1 - 3.5e-67 224.8 8.6 4e-67 224.6 8.6 1.0 1 0 0 1 1 1 1 L-alanine exporter ATPase_gene1 PF09527.10 CTQ29462.1 - 0.025 14.8 0.0 0.053 13.7 0.0 1.6 1 0 0 1 1 1 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DUF2002 PF09400.10 CTQ29463.1 - 8.1e-61 202.9 0.2 9.1e-61 202.7 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2002) DUF883 PF05957.13 CTQ29464.1 - 9.2e-23 80.7 2.1 1.3e-22 80.2 2.1 1.2 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) Activator-TraM PF11657.8 CTQ29464.1 - 0.00054 19.8 0.8 0.00058 19.7 0.8 1.1 1 0 0 1 1 1 1 Transcriptional activator TraM WXG100 PF06013.12 CTQ29464.1 - 0.0037 17.5 2.6 0.0053 17.0 2.6 1.3 1 0 0 1 1 1 1 Proteins of 100 residues with WXG PrmC_N PF17827.1 CTQ29464.1 - 0.039 14.5 1.2 0.039 14.5 0.1 1.6 2 0 0 2 2 2 0 PrmC N-terminal domain ACCA PF03255.14 CTQ29464.1 - 0.06 13.2 0.2 0.077 12.9 0.2 1.1 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Syntaxin_2 PF14523.6 CTQ29464.1 - 0.088 13.2 0.6 0.11 12.9 0.6 1.1 1 0 0 1 1 1 0 Syntaxin-like protein YtxH PF12732.7 CTQ29464.1 - 2.2 8.9 9.5 1.1 9.8 1.7 2.8 2 1 0 2 2 2 0 YtxH-like protein Aminotran_1_2 PF00155.21 CTQ29465.1 - 3.2e-22 79.2 0.0 4.4e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 CTQ29465.1 - 3.3e-16 58.7 1.2 7.1e-16 57.6 0.3 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_41 PF14502.6 CTQ29465.1 - 0.0049 16.5 0.0 0.0098 15.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain CMD PF02627.20 CTQ29466.1 - 8.9e-20 70.5 0.6 4.7e-19 68.2 0.3 2.0 2 0 0 2 2 2 1 Carboxymuconolactone decarboxylase family DUF309 PF03745.14 CTQ29466.1 - 0.048 13.4 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF309) Glutaredoxin PF00462.24 CTQ29467.1 - 3.5e-13 49.5 0.0 4.4e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_3 PF13192.6 CTQ29467.1 - 0.0027 17.7 0.0 0.0035 17.4 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain GST_N_3 PF13417.6 CTQ29467.1 - 0.034 14.5 0.0 0.042 14.3 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Head-tail_con PF12236.8 CTQ29467.1 - 0.068 11.6 0.0 0.08 11.4 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage head to tail connecting protein DUF836 PF05768.14 CTQ29467.1 - 0.091 13.2 0.0 0.092 13.2 0.0 1.1 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) GST_N PF02798.20 CTQ29467.1 - 0.13 12.6 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Flavodoxin_NdrI PF07972.11 CTQ29468.1 - 2.4e-45 153.6 0.0 2.7e-45 153.4 0.0 1.0 1 0 0 1 1 1 1 NrdI Flavodoxin like DUF563 PF04577.14 CTQ29468.1 - 0.087 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF563) Ribonuc_red_lgC PF02867.15 CTQ29469.1 - 1.4e-141 472.6 0.0 1.7e-139 465.7 0.0 2.6 2 1 0 2 2 2 1 Ribonucleotide reductase, barrel domain RNR_N PF08343.10 CTQ29469.1 - 1.8e-25 88.8 0.0 1.5e-24 85.8 0.0 2.2 2 0 0 2 2 2 1 Ribonucleotide reductase N-terminal Ribonuc_red_lgN PF00317.21 CTQ29469.1 - 3.3e-11 43.0 0.0 9.2e-11 41.6 0.0 1.8 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain Ribonuc_red_sm PF00268.21 CTQ29470.1 - 1.6e-84 283.7 0.0 1.9e-84 283.5 0.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain ABC_tran PF00005.27 CTQ29471.1 - 1.9e-33 115.9 0.0 3.9e-33 114.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter CBS PF00571.28 CTQ29471.1 - 2.3e-09 37.6 0.0 1.6e-05 25.2 0.0 2.9 2 0 0 2 2 2 2 CBS domain AAA_16 PF13191.6 CTQ29471.1 - 0.00026 21.4 0.3 0.00097 19.6 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 CTQ29471.1 - 0.0011 18.8 0.0 0.073 12.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 CTQ29471.1 - 0.0026 17.5 0.0 0.023 14.4 0.0 2.4 2 1 1 3 3 3 1 AAA domain AAA_22 PF13401.6 CTQ29471.1 - 0.0027 18.0 1.0 0.055 13.7 0.5 2.8 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CTQ29471.1 - 0.0029 17.3 0.0 0.006 16.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 CTQ29471.1 - 0.0029 16.5 0.2 0.26 10.1 0.0 2.1 2 0 0 2 2 2 1 Predicted ATPase of the ABC class SMC_N PF02463.19 CTQ29471.1 - 0.0041 16.6 0.2 0.12 11.8 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ29471.1 - 0.018 15.0 0.0 0.036 14.0 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_18 PF13238.6 CTQ29471.1 - 0.027 15.0 0.0 0.076 13.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 CTQ29471.1 - 0.032 14.7 0.1 0.67 10.4 0.1 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) BCA_ABC_TP_C PF12399.8 CTQ29471.1 - 0.063 13.2 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter APS_kinase PF01583.20 CTQ29471.1 - 0.073 13.0 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_33 PF13671.6 CTQ29471.1 - 0.1 12.7 0.1 0.19 11.9 0.1 1.7 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 CTQ29471.1 - 0.16 12.2 0.0 0.41 10.9 0.0 1.7 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF87 PF01935.17 CTQ29471.1 - 0.17 12.0 0.2 0.37 10.8 0.0 1.6 2 0 0 2 2 2 0 Helicase HerA, central domain BPD_transp_1 PF00528.22 CTQ29472.1 - 3e-26 92.3 16.1 3e-26 92.3 16.1 2.3 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OpuAC PF04069.12 CTQ29473.1 - 4.2e-57 193.7 4.2 4.9e-57 193.4 4.2 1.1 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system PepSY_2 PF13670.6 CTQ29473.1 - 0.019 14.9 0.1 0.057 13.4 0.1 1.8 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain AzlC PF03591.14 CTQ29474.1 - 7.4e-38 130.1 8.3 7.4e-38 130.1 8.3 1.8 2 0 0 2 2 2 1 AzlC protein PIG-F PF06699.11 CTQ29474.1 - 0.66 10.1 7.4 0.06 13.5 2.1 1.9 2 0 0 2 2 2 0 GPI biosynthesis protein family Pig-F Bacteriocin_IIc PF10439.9 CTQ29474.1 - 6 7.1 9.0 3.6 7.8 1.3 2.6 2 0 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide AzlD PF05437.12 CTQ29475.1 - 3.1e-14 52.9 7.3 3.6e-14 52.7 7.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) MarR PF01047.22 CTQ29476.1 - 6.8e-17 61.1 3.2 1.5e-16 60.0 0.2 2.5 2 1 0 2 2 2 1 MarR family MarR_2 PF12802.7 CTQ29476.1 - 9.9e-09 35.0 0.0 1.8e-08 34.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 CTQ29476.1 - 7.2e-06 26.4 0.2 2.3e-05 24.8 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 CTQ29476.1 - 0.00022 21.1 0.7 0.00057 19.8 0.1 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_34 PF13601.6 CTQ29476.1 - 0.00037 20.6 0.0 0.00072 19.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 CTQ29476.1 - 0.00096 18.7 0.2 0.026 14.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 CTQ29476.1 - 0.0054 16.6 0.0 0.0086 15.9 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FtsK_gamma PF09397.10 CTQ29476.1 - 0.0099 15.7 0.1 0.42 10.4 0.0 2.3 2 0 0 2 2 2 1 Ftsk gamma domain HTH_IclR PF09339.10 CTQ29476.1 - 0.018 14.8 0.0 0.036 13.9 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain PadR PF03551.14 CTQ29476.1 - 0.041 13.8 0.4 0.12 12.4 0.1 1.9 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family Rrf2 PF02082.20 CTQ29476.1 - 0.058 13.7 0.1 0.14 12.6 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator HlyD PF00529.20 CTQ29477.1 - 2.6e-16 59.3 0.8 4.9e-16 58.4 0.8 1.5 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS HlyD_D23 PF16576.5 CTQ29477.1 - 7.3e-15 54.8 8.5 2.4e-10 40.0 0.7 2.4 2 0 0 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 CTQ29477.1 - 4.4e-14 53.1 3.8 9.1e-11 42.4 0.1 2.7 2 1 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 CTQ29477.1 - 3.9e-07 29.8 1.1 3.9e-07 29.8 1.1 3.6 4 0 0 4 4 4 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 CTQ29477.1 - 0.0038 17.0 0.0 0.062 13.1 0.0 2.3 2 0 0 2 2 2 1 Biotin-requiring enzyme Orf78 PF06024.12 CTQ29477.1 - 0.0081 16.4 0.3 0.03 14.6 0.0 2.0 2 0 0 2 2 2 1 Orf78 (ac78) MFS_1 PF07690.16 CTQ29478.1 - 2.6e-53 181.2 37.9 2.6e-53 181.2 37.9 2.0 2 0 0 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 CTQ29478.1 - 0.00038 18.9 26.2 0.0029 16.0 0.3 4.0 4 1 1 5 5 5 3 Organic Anion Transporter Polypeptide (OATP) family Herpes_US9 PF06072.11 CTQ29478.1 - 0.15 12.0 0.2 2.5 8.0 0.0 2.6 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 MFS_2 PF13347.6 CTQ29478.1 - 0.23 10.0 32.3 0.067 11.7 6.5 3.6 3 2 0 3 3 3 0 MFS/sugar transport protein HMGL-like PF00682.19 CTQ29479.1 - 1.1e-73 248.1 0.0 1.4e-73 247.7 0.0 1.2 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 CTQ29479.1 - 1.4e-21 76.7 0.0 2.4e-21 76.1 0.0 1.3 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain HTH_18 PF12833.7 CTQ29480.1 - 1.9e-21 76.1 1.6 2.7e-21 75.6 0.8 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ29480.1 - 2e-12 46.9 0.1 1.8e-05 24.7 0.0 2.8 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 CTQ29480.1 - 1.8e-07 31.1 0.1 4.1e-07 30.0 0.1 1.6 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_2 PF07883.11 CTQ29480.1 - 3.3e-07 29.9 0.3 5.4e-07 29.2 0.3 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding_2 PF14525.6 CTQ29480.1 - 0.0047 16.6 0.3 0.0047 16.6 0.3 2.0 2 1 0 2 2 2 1 AraC-binding-like domain WXG100 PF06013.12 CTQ29480.1 - 0.055 13.7 0.1 0.11 12.7 0.1 1.5 1 0 0 1 1 1 0 Proteins of 100 residues with WXG HTH_23 PF13384.6 CTQ29480.1 - 0.095 12.5 0.5 9.1 6.2 0.0 2.4 2 0 0 2 2 2 0 Homeodomain-like domain HTH_31 PF13560.6 CTQ29480.1 - 0.3 11.4 3.6 0.99 9.8 3.5 2.0 1 1 0 1 1 1 0 Helix-turn-helix domain LuxS PF02664.15 CTQ29481.1 - 7.4e-62 207.6 0.1 8.6e-62 207.4 0.1 1.0 1 0 0 1 1 1 1 S-Ribosylhomocysteinase (LuxS) Glu_cys_ligase PF04262.14 CTQ29482.1 - 4.2e-172 571.9 0.0 6e-172 571.4 0.0 1.2 1 0 0 1 1 1 1 Glutamate-cysteine ligase SNARE_assoc PF09335.11 CTQ29483.1 - 1.2e-10 41.9 6.2 1.7e-10 41.4 6.2 1.2 1 0 0 1 1 1 1 SNARE associated Golgi protein HAD_2 PF13419.6 CTQ29484.1 - 2.5e-29 102.6 0.0 2.8e-29 102.5 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ29484.1 - 9.6e-17 62.0 0.1 3.3e-16 60.2 0.1 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ29484.1 - 1.7e-05 25.3 0.1 2.5e-05 24.8 0.1 1.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ29484.1 - 5e-05 23.3 0.1 0.00015 21.8 0.1 1.8 1 0 0 1 1 1 1 HAD-hyrolase-like BON PF04972.17 CTQ29485.1 - 3.7e-17 62.4 1.8 4.6e-17 62.1 1.8 1.1 1 0 0 1 1 1 1 BON domain CsrA PF02599.16 CTQ29487.1 - 2.3e-27 94.7 1.5 2.6e-27 94.5 1.5 1.0 1 0 0 1 1 1 1 Global regulator protein family S1 PF00575.23 CTQ29487.1 - 0.031 14.6 0.6 0.16 12.3 0.4 1.8 1 1 1 2 2 2 0 S1 RNA binding domain tRNA-synt_2c PF01411.19 CTQ29488.1 - 1.4e-238 792.9 0.0 1.9e-238 792.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 CTQ29488.1 - 1.5e-32 112.9 3.4 1.5e-32 112.9 3.4 1.9 2 0 0 2 2 1 1 DHHA1 domain tRNA_SAD PF07973.14 CTQ29488.1 - 1.8e-18 66.3 0.2 8.4e-18 64.2 0.2 2.3 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Leu_zip PF15294.6 CTQ29488.1 - 0.00086 18.9 1.4 0.00086 18.9 1.4 1.6 2 0 0 2 2 2 1 Leucine zipper Dynamitin PF04912.14 CTQ29488.1 - 0.0095 15.3 2.2 0.17 11.2 1.4 2.2 2 0 0 2 2 2 1 Dynamitin Peptidase_M23 PF01551.22 CTQ29488.1 - 0.044 14.0 2.7 6.7 7.0 0.3 2.7 2 0 0 2 2 2 0 Peptidase family M23 HypA PF01155.19 CTQ29488.1 - 0.2 11.7 0.2 0.73 9.9 0.1 2.0 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PI3K_P85_iSH2 PF16454.5 CTQ29488.1 - 0.5 9.9 5.4 3.5 7.2 0.9 2.3 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4618 PF15397.6 CTQ29488.1 - 0.85 9.0 5.3 0.31 10.4 1.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4618) DUF3450 PF11932.8 CTQ29488.1 - 2 7.7 8.2 0.17 11.2 2.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Spc7 PF08317.11 CTQ29488.1 - 3 6.6 8.3 0.61 8.9 2.7 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein ZapB PF06005.12 CTQ29488.1 - 4.7 7.7 11.7 0.2 12.1 2.7 2.4 2 0 0 2 2 2 0 Cell division protein ZapB RecX PF02631.16 CTQ29489.1 - 1.3e-31 109.6 0.4 2.7e-31 108.5 0.1 1.6 2 0 0 2 2 2 1 RecX family RecA PF00154.21 CTQ29490.1 - 3.6e-142 472.5 2.5 4.3e-142 472.2 2.5 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Rad51 PF08423.11 CTQ29490.1 - 2.2e-12 46.8 0.7 6.3e-12 45.3 0.7 1.6 1 1 0 1 1 1 1 Rad51 ATPase PF06745.13 CTQ29490.1 - 8.4e-10 38.4 0.3 3.5e-08 33.1 0.3 2.7 1 1 0 1 1 1 1 KaiC AAA_24 PF13479.6 CTQ29490.1 - 9.9e-06 25.4 0.0 1.6e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 CTQ29490.1 - 3.8e-05 23.7 0.0 8.7e-05 22.5 0.0 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 CTQ29490.1 - 0.0004 20.8 0.0 0.00071 20.0 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 CTQ29490.1 - 0.00052 19.6 0.6 0.036 13.7 0.6 2.5 1 1 0 1 1 1 1 AAA domain AAA_35 PF14516.6 CTQ29490.1 - 0.013 14.4 0.0 0.021 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain CbiA PF01656.23 CTQ29490.1 - 0.014 15.5 0.0 0.027 14.5 0.0 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain PAXNEB PF05625.11 CTQ29490.1 - 0.017 14.3 0.6 0.026 13.7 0.6 1.2 1 0 0 1 1 1 0 PAXNEB protein AAA PF00004.29 CTQ29490.1 - 0.032 14.6 0.0 0.072 13.5 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CobU PF02283.16 CTQ29490.1 - 0.034 13.7 0.0 0.067 12.8 0.0 1.5 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase MobB PF03205.14 CTQ29490.1 - 0.035 14.0 0.0 0.12 12.2 0.0 1.9 1 1 1 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_22 PF13401.6 CTQ29490.1 - 0.037 14.3 0.0 0.075 13.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 CTQ29490.1 - 0.05 13.6 0.0 0.16 12.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain TK PF00265.18 CTQ29490.1 - 0.059 13.2 0.0 0.099 12.5 0.0 1.3 1 0 0 1 1 1 0 Thymidine kinase CinA PF02464.17 CTQ29491.1 - 4.7e-59 198.4 1.8 5.4e-59 198.2 1.8 1.0 1 0 0 1 1 1 1 Competence-damaged protein ZnuA PF01297.17 CTQ29492.1 - 6.6e-76 255.1 0.0 7.4e-76 254.9 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic ABC-3 PF00950.17 CTQ29493.1 - 2.9e-51 174.4 27.1 3.3e-51 174.3 27.1 1.0 1 0 0 1 1 1 1 ABC 3 transport family FeoB_C PF07664.12 CTQ29493.1 - 0.014 15.0 0.1 0.014 15.0 0.1 3.7 5 1 1 6 6 6 0 Ferrous iron transport protein B C terminus ABC_tran PF00005.27 CTQ29494.1 - 2.4e-23 83.2 0.0 3.6e-23 82.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 CTQ29494.1 - 7.5e-09 35.3 0.0 0.0012 18.3 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 CTQ29494.1 - 1.2e-07 31.9 0.1 0.00028 20.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 CTQ29494.1 - 0.0012 19.0 0.2 0.0066 16.7 0.2 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 CTQ29494.1 - 0.002 18.7 0.1 0.0029 18.1 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 CTQ29494.1 - 0.0042 16.9 0.1 0.0064 16.3 0.1 1.2 1 0 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 CTQ29494.1 - 0.005 15.7 0.2 0.0078 15.1 0.2 1.2 1 0 0 1 1 1 1 Predicted ATPase of the ABC class AAA_22 PF13401.6 CTQ29494.1 - 0.0085 16.4 0.2 0.038 14.2 0.0 1.9 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CTQ29494.1 - 0.016 15.0 0.2 0.031 14.0 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 CTQ29494.1 - 0.02 14.5 0.3 0.054 13.1 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 CTQ29494.1 - 0.04 14.1 0.3 0.11 12.7 0.1 1.7 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 CTQ29494.1 - 0.06 13.4 0.1 0.13 12.4 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 CTQ29494.1 - 0.083 12.8 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 CTQ29494.1 - 0.084 13.3 0.7 0.14 12.5 0.6 1.7 1 1 0 1 1 1 0 AAA ATPase domain HlyD_D4 PF16572.5 CTQ29494.1 - 0.1 12.5 0.1 0.21 11.4 0.1 1.5 1 0 0 1 1 1 0 Long alpha hairpin domain of cation efflux system protein, CusB AAA_14 PF13173.6 CTQ29494.1 - 0.14 12.2 0.1 0.49 10.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 CTQ29494.1 - 0.15 12.0 1.0 0.26 11.2 0.4 1.6 2 0 0 2 2 2 0 NACHT domain Viral_helicase1 PF01443.18 CTQ29494.1 - 0.19 11.4 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NTPase_1 PF03266.15 CTQ29494.1 - 0.21 11.5 0.3 12 5.8 0.0 2.1 2 0 0 2 2 2 0 NTPase SLT_2 PF13406.6 CTQ29495.1 - 3.7e-91 305.4 0.0 4.3e-91 305.2 0.0 1.0 1 0 0 1 1 1 1 Transglycosylase SLT domain SLT PF01464.20 CTQ29495.1 - 0.0088 15.7 0.0 0.17 11.6 0.0 2.2 2 0 0 2 2 2 1 Transglycosylase SLT domain Glucosaminidase PF01832.20 CTQ29495.1 - 0.043 14.3 0.0 0.11 13.1 0.0 1.7 1 0 0 1 1 1 0 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EII-GUT PF03608.13 CTQ29496.1 - 3.7e-76 254.7 0.5 4.3e-76 254.5 0.5 1.0 1 0 0 1 1 1 1 PTS system enzyme II sorbitol-specific factor EIIBC-GUT_N PF03612.14 CTQ29497.1 - 1.3e-70 236.9 0.2 1.6e-70 236.6 0.2 1.1 1 0 0 1 1 1 1 Sorbitol phosphotransferase enzyme II N-terminus EIIBC-GUT_C PF07663.11 CTQ29497.1 - 6.6e-43 144.8 4.0 6.6e-43 144.8 4.0 2.2 2 0 0 2 2 2 1 Sorbitol phosphotransferase enzyme II C-terminus Gate PF07670.14 CTQ29497.1 - 0.002 18.4 2.7 0.002 18.4 2.7 1.6 2 0 0 2 2 2 1 Nucleoside recognition PTSIIA_gutA PF03829.13 CTQ29498.1 - 2.4e-40 136.9 0.0 2.7e-40 136.8 0.0 1.0 1 0 0 1 1 1 1 PTS system glucitol/sorbitol-specific IIA component SfsA_N PF17746.1 CTQ29498.1 - 0.025 14.7 0.0 0.088 13.0 0.0 1.8 2 0 0 2 2 2 0 SfsA N-terminal OB domain adh_short PF00106.25 CTQ29499.1 - 2.7e-48 164.0 0.1 3.2e-48 163.8 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 CTQ29499.1 - 1.1e-40 139.6 0.0 2.1e-40 138.8 0.0 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CTQ29499.1 - 0.0004 20.3 0.5 0.00069 19.6 0.5 1.4 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ29499.1 - 0.0028 17.1 0.0 0.14 11.5 0.1 2.1 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 CTQ29499.1 - 0.0059 16.5 0.3 0.0097 15.8 0.3 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 CTQ29499.1 - 0.032 14.5 0.2 0.054 13.7 0.2 1.4 1 0 0 1 1 1 0 TrkA-N domain PocR PF10114.9 CTQ29499.1 - 0.041 13.7 0.0 0.68 9.7 0.0 2.1 2 0 0 2 2 2 0 Sensory domain found in PocR F420_oxidored PF03807.17 CTQ29499.1 - 0.046 14.3 0.1 0.25 11.9 0.2 2.0 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent GutM PF06923.11 CTQ29500.1 - 5e-35 119.8 0.0 5.6e-35 119.7 0.0 1.0 1 0 0 1 1 1 1 Glucitol operon activator protein (GutM) DeoRC PF00455.22 CTQ29501.1 - 5.5e-52 175.9 0.8 8e-52 175.4 0.4 1.5 2 0 0 2 2 2 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ29501.1 - 5.3e-21 74.1 0.2 1.2e-20 73.0 0.1 1.7 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ29501.1 - 7.5e-09 35.4 0.1 1.7e-08 34.2 0.0 1.6 2 0 0 2 2 2 1 HTH domain HTH_5 PF01022.20 CTQ29501.1 - 0.0026 17.6 0.0 0.016 15.1 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family FeoC PF09012.10 CTQ29501.1 - 0.0037 17.3 0.0 0.0077 16.3 0.0 1.5 1 0 0 1 1 1 1 FeoC like transcriptional regulator HTH_IclR PF09339.10 CTQ29501.1 - 0.0057 16.4 0.1 0.01 15.6 0.1 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain Rrf2 PF02082.20 CTQ29501.1 - 0.0077 16.6 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator GntR PF00392.21 CTQ29501.1 - 0.008 15.8 0.0 0.018 14.7 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FaeA PF04703.12 CTQ29501.1 - 0.0099 16.2 0.0 0.027 14.8 0.0 1.7 1 0 0 1 1 1 1 FaeA-like protein HTH_AsnC-type PF13404.6 CTQ29501.1 - 0.012 15.4 0.0 0.03 14.2 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 CTQ29501.1 - 0.012 15.7 0.0 0.024 14.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Put_DNA-bind_N PF06971.13 CTQ29501.1 - 0.015 15.3 0.0 0.046 13.7 0.0 1.8 2 0 0 2 2 2 0 Putative DNA-binding protein N-terminus HTH_24 PF13412.6 CTQ29501.1 - 0.023 14.2 0.0 0.058 13.0 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Type2_restr_D3 PF16902.5 CTQ29501.1 - 0.029 14.3 0.0 0.075 13.0 0.0 1.7 1 0 0 1 1 1 0 Type-2 restriction enzyme D3 domain MarR PF01047.22 CTQ29501.1 - 0.035 14.0 0.1 0.065 13.2 0.1 1.4 1 0 0 1 1 1 0 MarR family UPF0052 PF01933.18 CTQ29501.1 - 0.075 12.3 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0052 DDRGK PF09756.9 CTQ29501.1 - 0.14 11.8 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain SIS PF01380.22 CTQ29502.1 - 7.8e-32 109.9 0.1 1.5e-31 109.0 0.1 1.4 1 0 0 1 1 1 1 SIS domain CBS PF00571.28 CTQ29502.1 - 2.2e-15 56.8 0.2 1.3e-06 28.7 0.0 2.7 3 0 0 3 3 3 2 CBS domain Sigma54_activat PF00158.26 CTQ29503.1 - 8.6e-67 224.0 0.0 1.3e-66 223.4 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 CTQ29503.1 - 1.2e-22 80.5 0.0 3.4e-22 79.0 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain GAF PF01590.26 CTQ29503.1 - 2.3e-09 38.0 0.2 6.6e-09 36.5 0.0 1.8 2 0 0 2 2 2 1 GAF domain GAF_2 PF13185.6 CTQ29503.1 - 1.4e-06 28.7 3.2 1.6e-06 28.5 0.4 2.3 3 0 0 3 3 2 1 GAF domain Mg_chelatase PF01078.21 CTQ29503.1 - 1.7e-06 27.6 0.1 0.067 12.6 0.0 2.4 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA PF00004.29 CTQ29503.1 - 1.1e-05 25.9 0.0 2.4e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 CTQ29503.1 - 0.00015 20.9 0.0 0.00027 20.1 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain AAA_5 PF07728.14 CTQ29503.1 - 0.00015 21.7 0.0 0.00031 20.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) HTH_8 PF02954.19 CTQ29503.1 - 0.0062 16.3 1.5 0.017 14.9 1.3 1.9 1 1 0 1 1 1 1 Bacterial regulatory protein, Fis family GAF_3 PF13492.6 CTQ29503.1 - 0.014 15.8 0.3 0.23 11.8 0.0 2.6 3 0 0 3 3 3 0 GAF domain DBD_HTH PF18430.1 CTQ29503.1 - 0.058 13.2 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 Putative DNA-binding domain AAA_2 PF07724.14 CTQ29503.1 - 0.087 12.9 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) IstB_IS21 PF01695.17 CTQ29503.1 - 0.1 12.3 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 CTQ29503.1 - 0.25 10.8 0.0 0.42 10.1 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Rubredoxin PF00301.20 CTQ29504.1 - 1.1e-20 73.4 3.3 1.9e-20 72.6 3.3 1.5 1 0 0 1 1 1 1 Rubredoxin Flavodoxin_1 PF00258.25 CTQ29504.1 - 1.8e-12 47.7 0.0 3e-12 47.0 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin Lactamase_B PF00753.27 CTQ29504.1 - 2.1e-10 40.9 0.2 3e-10 40.5 0.2 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 CTQ29504.1 - 1.6e-06 27.8 0.6 3.3e-06 26.8 0.6 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 CTQ29504.1 - 0.021 14.2 0.0 0.039 13.4 0.0 1.3 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain YliH PF10799.8 CTQ29504.1 - 0.062 13.2 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Biofilm formation protein (YliH/bssR) Lactamase_B_3 PF13483.6 CTQ29504.1 - 0.081 12.8 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DnaT PF17948.1 CTQ29504.1 - 0.11 12.2 0.3 0.29 10.9 0.0 1.8 2 0 0 2 2 2 0 DnaT DNA-binding domain DUF829 PF05705.14 CTQ29504.1 - 0.13 12.1 0.0 0.89 9.4 0.0 1.9 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF829) PHD PF00628.29 CTQ29504.1 - 0.21 11.5 1.4 0.51 10.3 1.4 1.7 1 1 0 1 1 1 0 PHD-finger Pyr_redox_2 PF07992.14 CTQ29505.1 - 1.4e-51 175.5 0.0 1.8e-51 175.1 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rbx_binding PF18113.1 CTQ29505.1 - 9.8e-21 73.3 0.0 1.9e-20 72.4 0.0 1.5 1 0 0 1 1 1 1 Rubredoxin binding C-terminal domain Pyr_redox PF00070.27 CTQ29505.1 - 2.2e-20 73.0 0.0 5.1e-19 68.6 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ29505.1 - 2.3e-14 53.4 0.0 2.8e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 CTQ29505.1 - 7.9e-10 38.4 0.1 1.2e-06 28.0 0.0 3.0 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 CTQ29505.1 - 6.9e-09 35.7 2.8 0.0035 17.0 0.5 3.2 2 1 1 3 3 3 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 CTQ29505.1 - 1.2e-07 31.1 1.6 0.0098 15.0 0.0 3.1 3 0 0 3 3 3 2 Lycopene cyclase protein NAD_binding_7 PF13241.6 CTQ29505.1 - 6.2e-06 26.6 0.0 0.00069 20.0 0.0 2.4 2 0 0 2 2 2 1 Putative NAD(P)-binding HI0933_like PF03486.14 CTQ29505.1 - 4.1e-05 22.5 1.1 0.12 11.1 0.0 3.1 3 0 0 3 3 3 2 HI0933-like protein NAD_binding_9 PF13454.6 CTQ29505.1 - 9.6e-05 22.4 2.7 0.22 11.5 0.3 4.0 3 1 1 4 4 4 1 FAD-NAD(P)-binding ThiF PF00899.21 CTQ29505.1 - 0.0002 20.8 0.1 0.00034 20.1 0.1 1.3 1 0 0 1 1 1 1 ThiF family TrkA_N PF02254.18 CTQ29505.1 - 0.00023 21.4 0.0 0.26 11.6 0.0 2.5 2 0 0 2 2 2 2 TrkA-N domain 3HCDH_N PF02737.18 CTQ29505.1 - 0.00032 20.6 0.4 0.001 19.0 0.2 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 CTQ29505.1 - 0.0017 17.7 2.4 0.023 14.0 0.4 2.2 1 1 1 2 2 2 1 FAD binding domain ApbA PF02558.16 CTQ29505.1 - 0.013 15.1 0.3 0.17 11.5 0.1 2.6 3 0 0 3 3 3 0 Ketopantoate reductase PanE/ApbA AlaDh_PNT_C PF01262.21 CTQ29505.1 - 0.02 14.2 0.4 0.091 12.1 0.2 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 CTQ29505.1 - 0.027 14.0 0.0 0.053 13.1 0.0 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amino_oxidase PF01593.24 CTQ29505.1 - 0.033 13.5 0.0 0.043 13.1 0.0 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 CTQ29505.1 - 0.034 14.4 0.0 0.17 12.1 0.0 2.2 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 CTQ29505.1 - 0.044 12.9 0.1 0.1 11.6 0.2 1.6 2 0 0 2 2 2 0 Glucose inhibited division protein A Shikimate_DH PF01488.20 CTQ29505.1 - 0.048 13.7 0.2 1 9.4 0.0 2.3 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 CTQ29505.1 - 0.049 14.2 0.8 9.9 6.8 0.1 2.8 3 1 0 3 3 2 0 NADP oxidoreductase coenzyme F420-dependent adh_short PF00106.25 CTQ29505.1 - 0.082 12.4 0.3 0.18 11.2 0.3 1.6 1 1 0 1 1 1 0 short chain dehydrogenase UAF_Rrn10 PF05234.11 CTQ29505.1 - 0.11 12.7 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 UAF complex subunit Rrn10 NicO PF03824.16 CTQ29506.1 - 1.6e-88 296.8 18.1 2e-88 296.4 18.1 1.1 1 0 0 1 1 1 1 High-affinity nickel-transport protein Sua5_yciO_yrdC PF01300.18 CTQ29507.1 - 3.9e-45 153.5 0.0 6.3e-45 152.9 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.12 CTQ29507.1 - 3.6e-32 109.8 18.4 2.3e-16 59.3 5.5 3.1 3 0 0 3 3 3 2 HypF finger HypF_C PF17788.1 CTQ29507.1 - 8.5e-30 103.5 0.1 1.5e-29 102.6 0.1 1.4 1 0 0 1 1 1 1 HypF Kae1-like domain Acylphosphatase PF00708.18 CTQ29507.1 - 2.5e-10 40.6 0.0 4.1e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 Acylphosphatase DZR PF12773.7 CTQ29507.1 - 0.0059 16.6 4.8 0.25 11.4 0.4 2.8 2 0 0 2 2 2 2 Double zinc ribbon Zn-ribbon_8 PF09723.10 CTQ29507.1 - 2.9 8.1 12.0 8.4 6.6 2.7 3.9 4 0 0 4 4 4 0 Zinc ribbon domain Fer4_6 PF12837.7 CTQ29508.1 - 9.3e-15 54.0 37.8 4.8e-07 29.6 2.6 4.7 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.27 CTQ29508.1 - 4.3e-14 51.6 42.2 6.6e-08 32.1 3.2 5.8 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_7 PF12838.7 CTQ29508.1 - 3.2e-12 46.8 34.0 9.3e-08 32.5 10.1 2.9 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ29508.1 - 8e-12 45.1 27.5 3.4e-06 27.1 8.3 3.0 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 CTQ29508.1 - 1e-10 41.0 35.8 3e-05 23.9 2.3 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_11 PF13247.6 CTQ29508.1 - 1.1e-10 41.5 15.2 5.4e-08 32.9 7.0 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 CTQ29508.1 - 8.2e-09 36.3 28.5 0.0084 17.0 4.3 4.5 4 1 0 4 4 4 4 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 CTQ29508.1 - 2.3e-08 34.0 36.9 3.2e-06 27.2 10.1 3.8 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_3 PF12798.7 CTQ29508.1 - 2.2e-07 31.3 45.1 0.0056 17.5 6.2 4.6 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_8 PF13183.6 CTQ29508.1 - 6.8e-06 26.4 32.1 0.0045 17.4 9.3 2.8 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 CTQ29508.1 - 9.7e-06 25.6 36.5 0.0067 16.5 12.8 3.7 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ29508.1 - 8.5e-05 22.8 4.2 8.5e-05 22.8 4.2 5.4 4 2 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.6 CTQ29508.1 - 0.021 15.4 2.0 0.021 15.4 2.0 4.4 2 2 4 6 6 6 0 4Fe-4S dicluster domain ETF_QO PF05187.13 CTQ29508.1 - 0.47 10.6 15.1 0.58 10.3 4.3 2.7 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_20 PF14691.6 CTQ29508.1 - 3.1 7.6 37.6 0.45 10.3 4.0 4.1 1 1 3 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Peripla_BP_3 PF13377.6 CTQ29509.1 - 8.8e-34 117.2 0.0 1.7e-33 116.3 0.0 1.5 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ29509.1 - 2.5e-23 82.9 0.0 3.1e-23 82.6 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 CTQ29509.1 - 4e-21 74.5 0.3 7.9e-21 73.6 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ29509.1 - 5.5e-16 58.9 0.0 9e-16 58.2 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_38 PF13936.6 CTQ29509.1 - 0.0002 21.0 0.3 0.26 11.1 0.0 2.9 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_31 PF13560.6 CTQ29509.1 - 0.002 18.4 0.1 0.0053 17.1 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ29509.1 - 0.0034 17.4 0.0 0.0068 16.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix TetR_N PF00440.23 CTQ29509.1 - 0.0089 15.8 0.1 0.026 14.3 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family MarR_2 PF12802.7 CTQ29509.1 - 0.038 13.9 0.2 1.1 9.2 0.0 2.5 2 0 0 2 2 2 0 MarR family HTH_IclR PF09339.10 CTQ29509.1 - 0.077 12.8 0.1 0.24 11.2 0.0 1.9 2 0 0 2 2 2 0 IclR helix-turn-helix domain DUF1995 PF09353.10 CTQ29509.1 - 0.096 12.7 0.0 0.25 11.4 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF1995) HTH_7 PF02796.15 CTQ29509.1 - 0.1 12.7 0.0 0.88 9.7 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase TrmB PF01978.19 CTQ29509.1 - 0.16 11.9 0.1 0.44 10.5 0.1 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB PTS_EIIC PF02378.18 CTQ29510.1 - 2.1e-40 138.7 29.2 2.1e-40 138.7 29.2 1.5 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ29510.1 - 2.5e-16 58.8 0.1 4.3e-16 58.1 0.1 1.4 1 0 0 1 1 1 1 phosphotransferase system, EIIB Glyco_hydro_1 PF00232.18 CTQ29511.1 - 7.4e-136 453.2 0.1 1e-135 452.7 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Cellulase PF00150.18 CTQ29511.1 - 0.054 12.9 0.0 0.088 12.2 0.0 1.4 1 0 0 1 1 1 0 Cellulase (glycosyl hydrolase family 5) SymE_toxin PF08845.10 CTQ29512.1 - 4e-19 68.4 0.0 5.2e-19 68.0 0.0 1.2 1 0 0 1 1 1 1 Toxin SymE, type I toxin-antitoxin system HycI PF01750.18 CTQ29513.1 - 1.3e-28 99.4 0.0 1.6e-28 99.2 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease HycH PF07450.11 CTQ29514.1 - 7.1e-55 184.9 0.0 8e-55 184.7 0.0 1.0 1 0 0 1 1 1 1 Formate hydrogenlyase maturation protein HycH Oxidored_q6 PF01058.22 CTQ29515.1 - 2e-23 82.6 0.1 2.9e-23 82.1 0.1 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.27 CTQ29516.1 - 8.3e-14 50.7 11.1 7.8e-09 35.0 1.3 3.0 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 CTQ29516.1 - 1.8e-12 47.6 9.0 1.8e-12 47.6 9.0 2.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ29516.1 - 6.3e-12 45.5 21.0 1.9e-09 37.6 10.3 3.0 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ29516.1 - 4.7e-09 35.9 12.1 7.2e-06 25.8 2.9 3.8 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_10 PF13237.6 CTQ29516.1 - 9.8e-09 35.2 10.9 9.8e-09 35.2 10.9 3.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 CTQ29516.1 - 2.4e-07 30.8 7.8 2.4e-07 30.8 7.8 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 CTQ29516.1 - 1.2e-06 29.3 24.7 0.0015 19.5 1.9 3.6 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 CTQ29516.1 - 0.00012 22.0 12.1 0.0038 17.2 4.2 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_3 PF12798.7 CTQ29516.1 - 0.00027 21.7 19.4 0.0045 17.8 7.3 3.8 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.6 CTQ29516.1 - 0.00034 21.0 12.8 0.00034 21.0 12.8 3.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 CTQ29516.1 - 0.00038 21.0 22.1 0.0022 18.5 11.4 3.6 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ29516.1 - 0.00073 19.9 12.3 0.0022 18.4 3.2 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_22 PF17179.4 CTQ29516.1 - 0.0076 17.1 6.5 0.13 13.1 1.9 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 CTQ29516.1 - 0.055 14.0 20.8 0.15 12.6 4.8 3.3 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 CTQ29516.1 - 0.14 12.4 15.8 0.19 11.9 0.4 2.9 1 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 CTQ29516.1 - 7.4 7.4 16.8 0.37 11.6 0.9 3.1 3 1 0 3 3 3 0 4Fe-4S single cluster domain Complex1_49kDa PF00346.19 CTQ29517.1 - 2.2e-47 161.4 0.0 1.7e-34 119.2 0.0 2.2 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 CTQ29517.1 - 1.5e-27 96.7 0.0 3.1e-27 95.6 0.0 1.5 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NiFeSe_Hases PF00374.19 CTQ29517.1 - 2e-13 50.1 5.0 6.9e-13 48.3 0.1 3.1 4 0 0 4 4 4 1 Nickel-dependent hydrogenase NADHdh PF00146.21 CTQ29518.1 - 4e-47 161.0 16.4 4.6e-47 160.8 16.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Proton_antipo_M PF00361.20 CTQ29519.1 - 4.7e-37 127.8 24.4 4.7e-37 127.8 24.4 2.2 2 1 0 2 2 2 1 Proton-conducting membrane transporter DUF2985 PF11204.8 CTQ29519.1 - 0.0082 16.3 0.2 0.088 13.0 0.2 2.8 1 0 0 1 1 1 1 Protein of unknown function (DUF2985) Fer4_7 PF12838.7 CTQ29520.1 - 1.2e-13 51.4 23.7 1.6e-05 25.4 13.3 3.2 3 0 0 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ29520.1 - 1.4e-11 43.9 33.0 0.0017 18.3 1.1 4.6 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.27 CTQ29520.1 - 4.6e-11 42.0 37.7 9.7e-07 28.4 1.3 5.3 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_16 PF13484.6 CTQ29520.1 - 9.6e-11 42.5 16.5 0.0068 17.3 0.7 4.4 4 1 0 4 4 4 4 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 CTQ29520.1 - 8.1e-10 38.7 26.5 1.3e-05 25.3 12.0 3.1 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_11 PF13247.6 CTQ29520.1 - 1.5e-09 37.9 17.4 8.6e-08 32.2 4.8 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ29520.1 - 9.9e-07 28.8 30.7 0.055 13.6 8.9 4.0 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_2 PF12797.7 CTQ29520.1 - 1.7e-05 24.6 34.3 0.02 14.9 3.2 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 CTQ29520.1 - 1.8e-05 24.8 31.4 0.0026 17.9 12.4 3.8 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 CTQ29520.1 - 5.7e-05 23.8 42.1 0.13 13.3 7.0 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 CTQ29520.1 - 0.00077 19.9 27.8 0.0031 17.9 12.4 3.0 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ29520.1 - 0.0011 19.3 33.7 0.0057 17.1 1.8 4.7 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.6 CTQ29520.1 - 0.0042 17.6 26.7 1.1 9.9 12.5 3.8 2 1 1 3 3 3 1 4Fe-4S dicluster domain ETF_QO PF05187.13 CTQ29520.1 - 0.015 15.4 12.0 0.02 15.0 3.3 2.9 2 1 1 3 3 3 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_5 PF12801.7 CTQ29520.1 - 0.021 14.7 1.9 3.2 7.8 0.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 CTQ29520.1 - 1.1 9.8 24.3 2.8 8.6 0.9 3.4 3 1 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 CTQ29520.1 - 3 8.7 19.9 0.98 10.2 7.3 3.7 3 1 0 3 3 3 0 4Fe-4S single cluster domain HycA_repressor PF11046.8 CTQ29521.1 - 4.5e-74 247.5 0.6 5.1e-74 247.3 0.6 1.0 1 0 0 1 1 1 1 Transcriptional repressor of hyc and hyp operons HypA PF01155.19 CTQ29522.1 - 6.8e-29 100.1 6.5 7.6e-29 100.0 6.5 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_9 PF14369.6 CTQ29522.1 - 0.064 13.5 8.2 0.14 12.4 8.2 1.6 1 0 0 1 1 1 0 zinc-ribbon cobW PF02492.19 CTQ29523.1 - 9.5e-35 119.8 0.0 1.3e-34 119.4 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Zeta_toxin PF06414.12 CTQ29523.1 - 0.0055 16.0 0.0 0.0073 15.6 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin Arf PF00025.21 CTQ29523.1 - 0.012 15.1 0.0 0.054 12.9 0.0 1.9 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_16 PF13191.6 CTQ29523.1 - 0.013 15.9 0.0 0.021 15.2 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.6 CTQ29523.1 - 0.043 14.2 0.0 0.06 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 CTQ29523.1 - 0.046 13.6 0.1 0.11 12.4 0.1 1.8 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B T2SSE PF00437.20 CTQ29523.1 - 0.079 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein HupF_HypC PF01455.18 CTQ29524.1 - 1.8e-25 88.8 1.1 2.2e-25 88.6 1.1 1.1 1 0 0 1 1 1 1 HupF/HypC family HypD PF01924.16 CTQ29525.1 - 1.8e-150 500.9 0.0 2e-150 500.8 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family AIRS_C PF02769.22 CTQ29526.1 - 3.2e-25 89.1 1.9 5.6e-25 88.3 1.9 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 CTQ29526.1 - 1.3e-16 61.0 1.5 3.1e-16 59.8 1.5 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Sigma54_activat PF00158.26 CTQ29527.1 - 4.7e-70 234.6 0.1 8.4e-70 233.8 0.1 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 CTQ29527.1 - 2.1e-21 76.5 0.0 9.3e-21 74.4 0.0 2.1 2 1 0 2 2 2 1 Sigma-54 interaction domain GAF PF01590.26 CTQ29527.1 - 1.3e-18 67.9 0.3 8.7e-13 49.1 0.0 2.5 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 CTQ29527.1 - 3.1e-14 53.5 0.2 7.5e-11 42.5 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_3 PF13492.6 CTQ29527.1 - 1.3e-10 41.7 0.0 2.4e-09 37.6 0.0 2.7 2 0 0 2 2 2 1 GAF domain AAA_5 PF07728.14 CTQ29527.1 - 1.1e-07 31.9 0.1 2.4e-07 30.8 0.1 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 CTQ29527.1 - 2.3e-06 28.1 0.0 6.4e-06 26.6 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) HTH_8 PF02954.19 CTQ29527.1 - 0.00026 20.7 0.2 0.00026 20.7 0.2 2.3 3 0 0 3 3 3 1 Bacterial regulatory protein, Fis family Mg_chelatase PF01078.21 CTQ29527.1 - 0.0016 17.9 0.5 0.64 9.4 0.1 2.9 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 CTQ29527.1 - 0.0058 17.0 0.3 0.02 15.3 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 CTQ29527.1 - 0.0095 15.7 0.0 0.09 12.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 CTQ29527.1 - 0.011 15.5 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_19 PF13245.6 CTQ29527.1 - 0.015 15.6 0.1 6.1 7.2 0.3 3.5 2 1 0 2 2 2 0 AAA domain ABC_tran PF00005.27 CTQ29527.1 - 0.043 14.3 0.1 0.41 11.2 0.0 2.5 2 0 0 2 2 2 0 ABC transporter HTH_50 PF18024.1 CTQ29527.1 - 0.052 13.2 0.2 0.14 11.8 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Glyco_hydro_1 PF00232.18 CTQ29528.1 - 2.6e-110 368.9 0.9 3e-110 368.7 0.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Cellulase PF00150.18 CTQ29528.1 - 0.00016 21.2 0.0 0.0003 20.3 0.0 1.3 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) CBM_35 PF16990.5 CTQ29529.1 - 4.1e-48 162.6 0.5 1.2e-47 161.1 0.2 1.9 2 0 0 2 2 2 1 Carbohydrate binding module (family 35) PhoD_N PF16655.5 CTQ29529.1 - 0.088 13.3 0.1 0.42 11.2 0.0 2.1 2 0 0 2 2 2 0 PhoD-like phosphatase, N-terminal domain CamS PF07537.11 CTQ29529.1 - 0.12 11.6 0.0 0.2 10.8 0.0 1.2 1 0 0 1 1 1 0 CamS sex pheromone cAM373 precursor Pur_ac_phosph_N PF16656.5 CTQ29529.1 - 0.27 11.8 0.1 0.27 11.8 0.1 2.7 3 0 0 3 3 3 0 Purple acid Phosphatase, N-terminal domain LamB PF02264.15 CTQ29530.1 - 1.4e-88 298.3 16.7 1.6e-88 298.1 16.7 1.0 1 0 0 1 1 1 1 LamB porin PTS_EIIC PF02378.18 CTQ29531.1 - 1.6e-45 155.5 24.4 2.1e-45 155.2 24.4 1.1 1 0 0 1 1 1 1 Phosphotransferase system, EIIC PTS_IIB PF02302.17 CTQ29532.1 - 4.3e-20 72.2 0.2 4.8e-20 72.0 0.2 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DSBA PF01323.20 CTQ29532.1 - 0.05 13.4 0.0 0.059 13.1 0.0 1.2 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Rimk_N PF18030.1 CTQ29532.1 - 0.081 13.3 0.1 3.8 8.0 0.0 2.2 1 1 0 2 2 2 0 RimK PreATP-grasp domain ATP-grasp_6 PF18419.1 CTQ29532.1 - 0.11 12.2 0.1 7.2 6.3 0.0 2.4 2 0 0 2 2 2 0 ATP-grasp-like domain PTS_EIIC PF02378.18 CTQ29533.1 - 1.9e-53 181.6 31.0 1.9e-53 181.6 31.0 1.4 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_IIA PF02255.16 CTQ29534.1 - 3.5e-32 110.3 7.0 4e-32 110.1 7.0 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIA subunit HemY_N PF07219.13 CTQ29534.1 - 0.16 12.2 3.2 0.15 12.2 2.5 1.4 1 1 0 1 1 1 0 HemY protein N-terminus ROK PF00480.20 CTQ29535.1 - 5.8e-69 232.8 0.0 6.7e-69 232.6 0.0 1.0 1 0 0 1 1 1 1 ROK family BcrAD_BadFG PF01869.20 CTQ29535.1 - 4.3e-05 23.1 0.0 0.012 15.1 0.0 2.3 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family Glucokinase PF02685.16 CTQ29535.1 - 0.00014 21.0 0.1 0.0023 17.0 0.1 2.5 1 1 0 1 1 1 1 Glucokinase baeRF_family2 PF18844.1 CTQ29535.1 - 0.041 13.9 0.0 0.073 13.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 Hydant_A_N PF05378.13 CTQ29535.1 - 0.068 12.9 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase N-terminal region DEDD_Tnp_IS110 PF01548.17 CTQ29535.1 - 0.13 12.1 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Transposase FGGY_N PF00370.21 CTQ29535.1 - 0.25 10.9 0.0 0.38 10.3 0.0 1.2 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain Peripla_BP_3 PF13377.6 CTQ29536.1 - 1.1e-24 87.7 0.0 2.4e-24 86.6 0.0 1.6 1 0 0 1 1 1 1 Periplasmic binding protein-like domain LacI PF00356.21 CTQ29536.1 - 3.5e-17 61.9 0.6 6.8e-17 61.0 0.6 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_1 PF00532.21 CTQ29536.1 - 5.2e-08 32.6 0.0 7.5e-08 32.1 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family HTH_31 PF13560.6 CTQ29536.1 - 0.00016 21.9 0.7 0.00034 20.9 0.7 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Peripla_BP_4 PF13407.6 CTQ29536.1 - 0.0057 16.3 0.6 0.025 14.2 0.5 2.0 1 1 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 CTQ29536.1 - 0.027 14.1 0.3 0.52 9.9 0.3 2.0 1 1 1 2 2 2 0 Periplasmic binding protein ZnuA PF01297.17 CTQ29537.1 - 3.4e-73 246.2 0.0 3.9e-73 246.0 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic ABC_tran PF00005.27 CTQ29538.1 - 3.4e-28 98.9 0.0 5.7e-28 98.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ29538.1 - 5.4e-12 46.1 0.0 6.2e-05 23.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ29538.1 - 2.8e-06 26.9 0.3 0.00049 19.6 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 CTQ29538.1 - 0.00027 21.1 0.1 0.0017 18.6 0.1 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 CTQ29538.1 - 0.00031 20.4 0.1 0.00079 19.1 0.1 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_33 PF13671.6 CTQ29538.1 - 0.0054 16.9 0.0 0.02 15.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 CTQ29538.1 - 0.017 15.6 0.0 0.027 15.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 CTQ29538.1 - 0.025 14.7 0.0 0.057 13.5 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 CTQ29538.1 - 0.037 13.7 0.0 0.097 12.4 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ29538.1 - 0.067 13.1 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase T2SSE PF00437.20 CTQ29538.1 - 0.082 12.0 0.0 1.3 8.0 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_25 PF13481.6 CTQ29538.1 - 0.096 12.3 0.0 0.27 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 CTQ29538.1 - 0.17 12.5 0.0 0.42 11.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain ABC-3 PF00950.17 CTQ29539.1 - 6.9e-83 278.1 25.2 7.8e-83 277.9 25.2 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 CTQ29539.1 - 3e-10 39.6 23.6 3e-10 39.6 23.6 1.6 1 1 1 2 2 2 1 FecCD transport family ABC-3 PF00950.17 CTQ29540.1 - 1.1e-74 251.2 31.4 1.3e-74 251.0 31.4 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 CTQ29540.1 - 0.00023 20.3 29.3 0.00023 20.3 29.3 1.5 1 1 0 1 1 1 1 FecCD transport family YgbA_NO PF11756.8 CTQ29541.1 - 4e-40 136.5 1.3 4.6e-40 136.3 1.3 1.0 1 0 0 1 1 1 1 Nitrous oxide-stimulated promoter AFOR_C PF01314.18 CTQ29541.1 - 0.047 12.7 0.2 0.05 12.6 0.2 1.1 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 LysR_substrate PF03466.20 CTQ29542.1 - 4.7e-29 101.3 0.6 6.5e-29 100.8 0.6 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29542.1 - 6.3e-17 61.3 0.2 1.3e-16 60.3 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF3800 PF12686.7 CTQ29542.1 - 0.11 13.1 0.0 0.16 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3800) Mem_trans PF03547.18 CTQ29544.1 - 1e-28 99.8 38.0 8.1e-15 54.1 17.2 2.0 1 1 1 2 2 2 2 Membrane transport protein TPP_enzyme_N PF02776.18 CTQ29545.1 - 7.2e-45 152.7 0.4 1.9e-41 141.6 0.0 2.5 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 CTQ29545.1 - 2.2e-19 69.8 0.0 4.2e-19 68.8 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 CTQ29545.1 - 4.2e-08 33.0 0.0 1.2e-07 31.5 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain E1_dh PF00676.20 CTQ29545.1 - 0.0025 16.8 0.0 0.0037 16.3 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component Rdx PF10262.9 CTQ29546.1 - 1.3e-32 111.8 0.0 1.5e-32 111.6 0.0 1.1 1 0 0 1 1 1 1 Rdx family Prim-Pol PF09250.11 CTQ29546.1 - 0.071 13.5 0.0 0.071 13.5 0.0 1.0 1 0 0 1 1 1 0 Bifunctional DNA primase/polymerase, N-terminal TonB_dep_Rec PF00593.24 CTQ29548.1 - 4.1e-39 135.8 40.0 4.1e-39 135.8 40.0 2.1 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 CTQ29548.1 - 7.1e-11 42.6 5.6 2.5e-10 40.9 5.6 1.9 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain OMP_b-brl_3 PF14905.6 CTQ29548.1 - 7.7e-08 31.7 17.9 7.7e-08 31.7 17.9 2.4 1 1 1 2 2 2 1 Outer membrane protein beta-barrel family HemS PF05171.12 CTQ29549.1 - 2.5e-80 266.7 0.6 1.2e-40 138.4 0.0 2.1 2 0 0 2 2 2 2 Haemin-degrading HemS.ChuX domain ChuX_HutX PF06228.13 CTQ29549.1 - 1.6e-63 212.5 1.6 6.9e-33 113.3 0.4 2.2 2 0 0 2 2 2 2 Haem utilisation ChuX/HutX Peripla_BP_2 PF01497.18 CTQ29550.1 - 2.5e-26 92.7 0.1 2.9e-26 92.5 0.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein DUF4131 PF13567.6 CTQ29550.1 - 0.084 12.5 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) FecCD PF01032.18 CTQ29551.1 - 1.9e-91 306.3 38.6 2.3e-91 306.0 38.6 1.0 1 0 0 1 1 1 1 FecCD transport family ABC_tran PF00005.27 CTQ29552.1 - 3.1e-24 86.1 0.0 4.6e-24 85.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ29552.1 - 1.4e-12 48.0 0.0 1.4e-05 25.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ29552.1 - 1.6e-07 31.0 0.0 0.005 16.3 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ29552.1 - 3e-05 23.7 0.1 5.8e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 CTQ29552.1 - 3.4e-05 24.3 0.6 6.8e-05 23.3 0.6 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 CTQ29552.1 - 9.8e-05 22.9 0.0 0.00013 22.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ29552.1 - 0.00038 20.4 0.0 0.00074 19.5 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase Mg_chelatase PF01078.21 CTQ29552.1 - 0.0034 16.8 0.1 0.013 14.9 0.1 1.9 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 CTQ29552.1 - 0.0044 17.3 0.0 0.021 15.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 CTQ29552.1 - 0.0053 16.5 0.0 0.0087 15.8 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain SbcCD_C PF13558.6 CTQ29552.1 - 0.012 15.9 0.0 0.02 15.1 0.0 1.4 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 CTQ29552.1 - 0.022 14.5 0.1 0.035 13.8 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 CTQ29552.1 - 0.042 14.1 0.0 0.14 12.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 CTQ29552.1 - 0.045 13.3 1.1 0.2 11.2 0.2 2.2 1 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 CTQ29552.1 - 0.056 13.5 0.0 0.098 12.7 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.6 CTQ29552.1 - 0.057 13.6 0.4 0.37 11.0 0.1 2.2 1 1 1 2 2 2 0 AAA domain Sigma54_activat PF00158.26 CTQ29552.1 - 0.073 12.8 0.0 1.4 8.6 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain MukB PF04310.12 CTQ29552.1 - 0.12 12.2 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 MukB N-terminal AAA_27 PF13514.6 CTQ29552.1 - 0.21 11.2 0.0 0.37 10.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 CTQ29552.1 - 0.23 11.1 0.0 0.61 9.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain BCA_ABC_TP_C PF12399.8 CTQ29552.1 - 0.24 11.4 0.6 4.1 7.4 0.0 2.6 3 0 0 3 3 2 0 Branched-chain amino acid ATP-binding cassette transporter DUF3584 PF12128.8 CTQ29552.1 - 0.36 8.3 0.3 0.48 7.9 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) MutS_V PF00488.21 CTQ29553.1 - 9e-90 299.8 0.2 1.8e-89 298.8 0.2 1.5 1 0 0 1 1 1 1 MutS domain V MutS_I PF01624.20 CTQ29553.1 - 5.9e-44 148.9 0.0 1.6e-43 147.5 0.0 1.8 2 0 0 2 2 2 1 MutS domain I MutS_III PF05192.18 CTQ29553.1 - 4.3e-39 134.7 1.2 9.5e-39 133.6 1.2 1.6 1 0 0 1 1 1 1 MutS domain III MutS_II PF05188.17 CTQ29553.1 - 2.1e-34 118.7 0.0 5.1e-34 117.5 0.0 1.7 1 0 0 1 1 1 1 MutS domain II MutS_IV PF05190.18 CTQ29553.1 - 6.9e-29 100.1 0.1 1.8e-28 98.7 0.1 1.8 1 0 0 1 1 1 1 MutS family domain IV Noelin-1 PF12308.8 CTQ29553.1 - 0.22 11.5 0.3 0.7 9.9 0.3 1.8 1 0 0 1 1 1 0 Neurogenesis glycoprotein HOK_GEF PF01848.16 CTQ29554.1 - 2.7e-20 71.5 2.3 3e-20 71.4 2.3 1.0 1 0 0 1 1 1 1 Hok/gef family Zn_Tnp_IS1595 PF12760.7 CTQ29555.1 - 0.0041 17.1 0.5 0.0067 16.4 0.5 1.4 1 0 0 1 1 1 1 Transposase zinc-ribbon domain DUF1062 PF06353.12 CTQ29555.1 - 0.16 12.8 0.0 0.19 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1062) PhnA_Zn_Ribbon PF08274.12 CTQ29555.1 - 0.63 10.0 4.4 2.2 8.3 0.3 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon UbiD PF01977.16 CTQ29556.1 - 1.5e-105 353.4 0.0 1.7e-105 353.2 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Flavoprotein PF02441.19 CTQ29557.1 - 3e-24 85.6 0.1 3.3e-24 85.4 0.1 1.1 1 0 0 1 1 1 1 Flavoprotein MarR PF01047.22 CTQ29558.1 - 1.8e-14 53.4 0.4 2.2e-13 49.9 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 CTQ29558.1 - 3.8e-11 43.3 0.1 5.6e-11 42.8 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 CTQ29558.1 - 2.1e-08 33.9 0.2 3.7e-08 33.1 0.2 1.4 1 0 0 1 1 1 1 MarR family PadR PF03551.14 CTQ29558.1 - 0.00056 19.8 0.0 0.00086 19.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF505 PF04458.12 CTQ29558.1 - 0.013 13.9 0.0 0.015 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HxlR PF01638.17 CTQ29558.1 - 0.036 13.9 0.0 0.077 12.9 0.0 1.5 1 1 0 1 1 1 0 HxlR-like helix-turn-helix TetR_C_25 PF17933.1 CTQ29558.1 - 0.08 13.3 0.1 0.14 12.5 0.1 1.6 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Fe_dep_repress PF01325.19 CTQ29558.1 - 0.11 12.7 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Penicillinase_R PF03965.16 CTQ29558.1 - 0.12 12.7 0.0 0.19 12.1 0.0 1.6 1 1 0 1 1 1 0 Penicillinase repressor LysR_substrate PF03466.20 CTQ29559.1 - 6.5e-44 149.8 8.4 6.5e-44 149.8 8.4 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29559.1 - 3.5e-17 62.1 1.8 6.9e-17 61.2 1.8 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family FeoB_C PF07664.12 CTQ29559.1 - 0.072 12.8 0.1 0.16 11.7 0.1 1.6 1 0 0 1 1 1 0 Ferrous iron transport protein B C terminus MFS_1 PF07690.16 CTQ29560.1 - 1.1e-47 162.8 57.4 1.3e-34 119.7 33.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ29560.1 - 5.8e-05 22.5 22.9 5.8e-05 22.5 22.9 1.3 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Sugar_tr PF00083.24 CTQ29560.1 - 0.00026 20.0 11.8 0.00026 20.0 11.8 2.5 2 1 0 2 2 2 1 Sugar (and other) transporter MFS_2 PF13347.6 CTQ29560.1 - 0.0066 15.1 30.6 0.014 14.0 10.8 2.6 2 1 1 3 3 3 2 MFS/sugar transport protein TRI12 PF06609.13 CTQ29560.1 - 0.032 12.6 12.0 0.41 9.0 5.3 2.1 2 0 0 2 2 2 0 Fungal trichothecene efflux pump (TRI12) DUF4440 PF14534.6 CTQ29561.1 - 0.0001 22.6 0.1 0.00013 22.3 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 CTQ29561.1 - 0.047 14.3 0.1 0.059 14.0 0.1 1.1 1 0 0 1 1 1 0 SnoaL-like domain Sigma70_r2 PF04542.14 CTQ29562.1 - 1.6e-21 75.8 0.6 3.3e-21 74.8 0.2 1.8 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r3 PF04539.16 CTQ29562.1 - 4.1e-21 74.9 9.3 1.3e-20 73.3 1.8 3.3 4 0 0 4 4 4 1 Sigma-70 region 3 Sigma70_r4 PF04545.16 CTQ29562.1 - 3.8e-17 61.5 3.7 2.5e-15 55.7 2.8 2.6 2 0 0 2 2 2 2 Sigma-70, region 4 Sigma70_r1_2 PF00140.20 CTQ29562.1 - 9.8e-12 44.7 0.1 3e-11 43.1 0.1 1.9 1 0 0 1 1 1 1 Sigma-70 factor, region 1.2 Peptidase_M23 PF01551.22 CTQ29563.1 - 1.5e-31 108.5 1.4 1.5e-31 108.5 1.4 2.5 3 1 1 4 4 4 1 Peptidase family M23 LysM PF01476.20 CTQ29563.1 - 2.3e-10 40.4 0.1 7.3e-10 38.8 0.0 1.9 2 0 0 2 2 2 1 LysM domain Biotin_lipoyl_2 PF13533.6 CTQ29563.1 - 0.0026 17.5 0.0 0.23 11.3 0.0 3.0 3 0 0 3 3 3 1 Biotin-lipoyl like PCMT PF01135.19 CTQ29564.1 - 8.2e-77 257.7 0.0 9.6e-77 257.5 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 CTQ29564.1 - 3.9e-06 26.1 0.0 4.9e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 CTQ29564.1 - 1.4e-05 25.7 0.0 2.6e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ29564.1 - 1.6e-05 24.7 0.0 2.1e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ29564.1 - 0.0027 18.3 0.0 0.0045 17.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ29564.1 - 0.0047 16.8 0.0 0.0084 16.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 CTQ29564.1 - 0.012 15.6 0.0 0.019 15.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain NodS PF05401.11 CTQ29564.1 - 0.064 12.9 0.0 0.092 12.4 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) CMAS PF02353.20 CTQ29564.1 - 0.065 12.5 0.0 0.093 12.0 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DREV PF05219.12 CTQ29564.1 - 0.12 11.5 0.0 0.19 10.8 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase MTS PF05175.14 CTQ29564.1 - 0.15 11.6 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain SurE PF01975.17 CTQ29565.1 - 2.9e-57 193.6 0.0 3.6e-57 193.3 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE TruD PF01142.18 CTQ29566.1 - 4.7e-61 206.9 0.0 1.6e-41 142.5 0.0 2.0 2 0 0 2 2 2 2 tRNA pseudouridine synthase D (TruD) YgbB PF02542.16 CTQ29567.1 - 9.2e-67 224.1 0.0 1e-66 224.0 0.0 1.0 1 0 0 1 1 1 1 YgbB family IspD PF01128.19 CTQ29568.1 - 4.9e-90 301.1 0.0 5.7e-90 300.9 0.0 1.0 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transf_3 PF12804.7 CTQ29568.1 - 2e-16 60.8 1.8 2.7e-16 60.3 1.8 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain DivIC PF04977.15 CTQ29569.1 - 2e-30 104.4 0.0 2.8e-30 103.9 0.0 1.2 1 0 0 1 1 1 1 Septum formation initiator CENP-H PF05837.12 CTQ29569.1 - 0.048 14.1 0.2 0.067 13.6 0.2 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) FtsL PF04999.13 CTQ29569.1 - 0.11 12.5 0.2 0.17 11.9 0.2 1.4 1 1 0 1 1 1 0 Cell division protein FtsL DUF3561 PF12084.8 CTQ29570.1 - 7e-48 161.1 7.8 7.7e-48 160.9 7.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3561) APS_kinase PF01583.20 CTQ29571.1 - 9.5e-74 246.5 0.0 1.2e-73 246.2 0.0 1.1 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.6 CTQ29571.1 - 7.2e-07 29.5 0.0 1.1e-06 28.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CTQ29571.1 - 1.7e-05 25.4 0.0 2.8e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain KTI12 PF08433.10 CTQ29571.1 - 0.00021 20.9 0.0 0.00029 20.4 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 CbiA PF01656.23 CTQ29571.1 - 0.00059 19.9 0.0 0.00082 19.4 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 CTQ29571.1 - 0.00069 20.0 0.4 0.0011 19.4 0.4 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ29571.1 - 0.0032 17.2 0.2 0.007 16.1 0.0 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain SRP54 PF00448.22 CTQ29571.1 - 0.0053 16.4 0.0 0.0072 16.0 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain ParA PF10609.9 CTQ29571.1 - 0.0059 16.1 0.0 0.0085 15.6 0.0 1.3 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase MeaB PF03308.16 CTQ29571.1 - 0.0064 15.5 0.0 0.0089 15.0 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 CTQ29571.1 - 0.011 15.1 0.0 0.017 14.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 CTQ29571.1 - 0.011 15.5 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain Torsin PF06309.11 CTQ29571.1 - 0.021 14.9 0.0 0.039 14.1 0.0 1.5 1 0 0 1 1 1 0 Torsin AAA_22 PF13401.6 CTQ29571.1 - 0.025 14.9 0.0 0.044 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 CTQ29571.1 - 0.036 13.8 0.0 0.057 13.1 0.0 1.3 1 0 0 1 1 1 0 Thymidylate kinase AAA_17 PF13207.6 CTQ29571.1 - 0.046 14.1 0.1 0.1 13.0 0.0 1.7 2 0 0 2 2 1 0 AAA domain ABC_tran PF00005.27 CTQ29571.1 - 0.047 14.2 0.0 0.063 13.8 0.0 1.6 1 1 0 1 1 1 0 ABC transporter ATP_bind_1 PF03029.17 CTQ29571.1 - 0.048 13.4 0.0 0.093 12.5 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein PRK PF00485.18 CTQ29571.1 - 0.052 13.3 0.0 0.09 12.5 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Ploopntkinase1 PF18748.1 CTQ29571.1 - 0.14 11.6 0.0 8.5 5.8 0.0 2.1 2 0 0 2 2 2 0 P-loop Nucleotide Kinase1 RNA_helicase PF00910.22 CTQ29571.1 - 0.22 11.9 0.0 0.38 11.2 0.0 1.4 1 0 0 1 1 1 0 RNA helicase G-alpha PF00503.20 CTQ29571.1 - 0.24 10.5 0.0 0.32 10.1 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit GTP_EFTU PF00009.27 CTQ29572.1 - 1.8e-44 151.6 0.0 2.4e-44 151.2 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 CTQ29572.1 - 5.2e-07 29.7 0.0 9.4e-06 25.7 0.0 2.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 CTQ29572.1 - 9.6e-06 25.9 0.1 2e-05 24.9 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 SRPRB PF09439.10 CTQ29572.1 - 0.014 14.8 0.0 0.84 9.0 0.0 2.3 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 CTQ29572.1 - 0.042 13.4 0.0 0.24 10.9 0.0 2.2 2 1 0 2 2 2 0 Ferrous iron transport protein B Roc PF08477.13 CTQ29572.1 - 0.042 14.1 0.0 14 5.9 0.0 2.3 1 1 1 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase PAPS_reduct PF01507.19 CTQ29573.1 - 2.7e-66 222.9 0.0 3.2e-66 222.7 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family TP_methylase PF00590.20 CTQ29574.1 - 4.9e-52 177.0 2.0 9.8e-52 176.0 2.0 1.5 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases NAD_binding_7 PF13241.6 CTQ29574.1 - 9.7e-29 99.9 0.1 2.5e-28 98.6 0.1 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding CysG_dimeriser PF10414.9 CTQ29574.1 - 3.9e-20 71.3 2.6 1.7e-19 69.3 2.6 2.2 1 0 0 1 1 1 1 Sirohaem synthase dimerisation region Sirohm_synth_M PF14824.6 CTQ29574.1 - 8.6e-09 34.7 0.4 1.8e-08 33.6 0.4 1.6 1 0 0 1 1 1 1 Sirohaem biosynthesis protein central Shikimate_DH PF01488.20 CTQ29574.1 - 0.001 19.1 0.4 0.0046 17.0 0.0 2.2 2 1 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase LSDAT_prok PF18171.1 CTQ29574.1 - 0.032 13.5 0.1 0.12 11.7 0.0 2.0 2 0 0 2 2 2 0 SLOG in TRPM, prokaryote Peptidase_M28 PF04389.17 CTQ29575.1 - 8.6e-32 110.4 0.0 1.4e-31 109.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M20 PF01546.28 CTQ29575.1 - 2.5e-05 24.1 0.0 4.6e-05 23.2 0.0 1.6 2 0 0 2 2 2 1 Peptidase family M20/M25/M40 Peptidase_M42 PF05343.14 CTQ29575.1 - 0.00022 20.4 0.1 0.0049 15.9 0.0 2.1 2 0 0 2 2 2 1 M42 glutamyl aminopeptidase PAPS_reduct PF01507.19 CTQ29576.1 - 5.4e-52 176.3 0.0 6.7e-52 176.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family DDE_Tnp_1 PF01609.21 CTQ29576.1 - 0.094 12.3 0.0 0.15 11.7 0.0 1.4 1 1 0 1 1 1 0 Transposase DDE domain LisH PF08513.11 CTQ29576.1 - 0.15 12.1 0.2 0.37 10.8 0.2 1.7 1 0 0 1 1 1 0 LisH YceG PF02618.16 CTQ29576.1 - 0.17 11.4 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 YceG-like family NIR_SIR PF01077.22 CTQ29577.1 - 3.9e-52 176.0 0.1 1.6e-47 161.0 0.1 2.3 2 0 0 2 2 2 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 CTQ29577.1 - 4.2e-29 100.2 0.1 6.2e-13 48.4 0.0 3.2 3 0 0 3 3 3 2 Nitrite/Sulfite reductase ferredoxin-like half domain RHH_1 PF01402.21 CTQ29577.1 - 0.18 11.8 0.4 1.8 8.7 0.0 2.6 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family Flavodoxin_1 PF00258.25 CTQ29578.1 - 1.1e-32 113.2 0.2 2.7e-32 111.9 0.2 1.7 1 0 0 1 1 1 1 Flavodoxin FAD_binding_1 PF00667.20 CTQ29578.1 - 1.7e-27 96.4 0.0 1.4e-25 90.2 0.0 2.3 1 1 0 1 1 1 1 FAD binding domain NAD_binding_1 PF00175.21 CTQ29578.1 - 7.4e-22 78.1 0.0 1.7e-21 76.9 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain PTPS PF01242.19 CTQ29579.1 - 5.6e-34 116.7 0.0 6.2e-34 116.6 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Fer4_14 PF13394.6 CTQ29580.1 - 4.2e-13 49.5 0.0 8.9e-13 48.4 0.0 1.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 CTQ29580.1 - 1.6e-09 38.3 0.0 2.4e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 CTQ29580.1 - 2.5e-06 27.8 0.1 4.1e-06 27.1 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain NAD_binding_4 PF07993.12 CTQ29581.1 - 5.1e-38 130.7 0.0 6.5e-38 130.4 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Epimerase PF01370.21 CTQ29581.1 - 1.1e-11 44.7 0.0 1.5e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 CTQ29581.1 - 5.3e-06 26.1 0.0 9.1e-06 25.3 0.0 1.4 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 CTQ29581.1 - 0.00035 19.7 0.0 0.00057 19.0 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 CTQ29581.1 - 0.0027 16.9 0.0 0.0039 16.4 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Enolase_C PF00113.22 CTQ29582.1 - 1.7e-142 474.0 2.6 2.1e-142 473.7 2.6 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 CTQ29582.1 - 8.7e-58 194.2 0.3 2.1e-57 192.9 0.3 1.7 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 CTQ29582.1 - 1.3e-06 28.2 0.0 3.3e-06 26.8 0.0 1.7 1 1 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 CTQ29582.1 - 0.00037 19.7 0.4 0.0012 18.1 0.1 1.9 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus CTP_synth_N PF06418.14 CTQ29583.1 - 2.8e-125 417.0 0.0 3.7e-125 416.6 0.0 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 CTQ29583.1 - 3.2e-65 219.5 0.0 5.8e-65 218.6 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 CTQ29583.1 - 7.6e-11 42.2 0.2 2.4e-09 37.3 0.0 2.8 2 1 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 CTQ29583.1 - 0.0099 15.9 0.0 0.015 15.4 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MazG PF03819.17 CTQ29585.1 - 1.6e-37 127.5 2.5 1.5e-27 95.5 0.0 2.7 2 0 0 2 2 2 2 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 CTQ29585.1 - 1.1e-09 38.6 3.3 0.0012 19.2 0.5 3.3 3 1 0 3 3 3 2 Phosphoribosyl-ATP pyrophosphohydrolase DUF3168 PF11367.8 CTQ29585.1 - 0.024 14.8 0.2 0.1 12.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3168) HD_4 PF13328.6 CTQ29586.1 - 3.3e-39 134.1 0.7 7.4e-39 133.0 0.7 1.6 1 0 0 1 1 1 1 HD domain RelA_SpoT PF04607.17 CTQ29586.1 - 5.8e-37 126.5 0.2 1.9e-36 124.9 0.0 2.0 2 0 0 2 2 2 1 Region found in RelA / SpoT proteins TGS PF02824.21 CTQ29586.1 - 6.7e-22 77.3 0.1 5.1e-21 74.5 0.0 2.5 2 0 0 2 2 2 1 TGS domain ACT_4 PF13291.6 CTQ29586.1 - 2.9e-18 66.2 1.1 6.8e-18 65.0 1.1 1.6 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 CTQ29586.1 - 2.3e-10 40.0 0.3 8.2e-10 38.3 0.3 2.0 1 0 0 1 1 1 1 ACT domain Prok-JAB PF14464.6 CTQ29586.1 - 0.023 14.5 0.2 0.066 13.0 0.1 1.8 1 1 0 1 1 1 0 Prokaryotic homologs of the JAB domain AAA_26 PF13500.6 CTQ29586.1 - 0.044 13.6 0.2 0.37 10.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain tRNA_U5-meth_tr PF05958.11 CTQ29587.1 - 2.9e-27 95.6 0.0 9.8e-26 90.6 0.0 2.7 2 1 0 2 2 2 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 CTQ29587.1 - 3e-13 49.8 0.0 5.7e-13 48.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain TRAM PF01938.20 CTQ29587.1 - 5.8e-10 39.0 0.6 1.1e-09 38.1 0.4 1.6 2 0 0 2 2 1 1 TRAM domain Methyltransf_25 PF13649.6 CTQ29587.1 - 2.2e-09 37.9 0.0 7.5e-09 36.2 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 CTQ29587.1 - 3.4e-07 30.2 0.0 6.4e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 CTQ29587.1 - 9.1e-06 24.9 0.0 1.7e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Met_10 PF02475.16 CTQ29587.1 - 1.5e-05 24.9 0.0 2.3e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 CTQ29587.1 - 2.6e-05 24.0 0.0 5.5e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 CTQ29587.1 - 7.4e-05 22.4 0.0 0.00014 21.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 CTQ29587.1 - 0.00011 22.8 0.0 0.00052 20.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ29587.1 - 0.00087 19.2 0.0 0.0021 17.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 CTQ29587.1 - 0.002 17.6 0.0 0.0062 16.0 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase Methyltr_RsmB-F PF01189.17 CTQ29587.1 - 0.0033 17.1 0.0 0.0071 16.0 0.0 1.5 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F UPF0020 PF01170.18 CTQ29587.1 - 0.013 15.2 0.0 5.3 6.7 0.0 3.1 2 1 0 2 2 2 0 Putative RNA methylase family UPF0020 Ubie_methyltran PF01209.18 CTQ29587.1 - 0.019 14.3 0.0 0.03 13.6 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family PrmA PF06325.13 CTQ29587.1 - 0.047 13.1 0.0 0.21 10.9 0.0 2.0 3 0 0 3 3 3 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 CTQ29587.1 - 0.072 12.7 0.0 0.51 9.9 0.0 2.0 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase FtsJ PF01728.19 CTQ29587.1 - 0.083 13.0 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 FtsJ-like methyltransferase CMAS PF02353.20 CTQ29587.1 - 0.084 12.2 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase TPMT PF05724.11 CTQ29587.1 - 0.1 12.2 0.0 0.26 10.9 0.0 1.6 2 0 0 2 2 2 0 Thiopurine S-methyltransferase (TPMT) DUF2222 PF09984.9 CTQ29588.1 - 3.9e-53 179.3 0.1 8.5e-53 178.2 0.1 1.6 1 0 0 1 1 1 1 Uncharacterised signal transduction histidine kinase domain (DUF2222) HATPase_c PF02518.26 CTQ29588.1 - 6.5e-32 110.4 0.3 1.1e-31 109.6 0.3 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 CTQ29588.1 - 1.6e-27 95.9 1.8 1.6e-27 95.9 1.8 2.6 3 0 0 3 3 3 1 Response regulator receiver domain HisKA PF00512.25 CTQ29588.1 - 1.2e-19 70.1 7.2 2.9e-19 68.9 0.3 4.1 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain Hpt PF01627.23 CTQ29588.1 - 3.5e-13 49.6 0.4 3.5e-13 49.6 0.4 2.7 2 0 0 2 2 2 1 Hpt domain HAMP PF00672.25 CTQ29588.1 - 1.6e-06 28.3 2.5 1.8e-06 28.2 1.0 1.9 2 0 0 2 2 2 1 HAMP domain SelB-wing_1 PF09105.10 CTQ29588.1 - 0.011 15.7 0.0 0.034 14.1 0.0 1.8 1 0 0 1 1 1 0 Elongation factor SelB, winged helix HATPase_c_3 PF13589.6 CTQ29588.1 - 0.032 14.0 0.0 0.074 12.9 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1640 PF07798.11 CTQ29588.1 - 0.078 13.0 4.1 0.16 12.0 2.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1640) Gly_kinase PF02595.15 CTQ29589.1 - 1.6e-150 501.2 9.4 1.8e-150 501.0 9.4 1.0 1 0 0 1 1 1 1 Glycerate kinase family MR_MLE_C PF13378.6 CTQ29590.1 - 1.6e-36 125.9 0.2 2.4e-36 125.4 0.2 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 CTQ29590.1 - 0.0046 17.2 0.1 0.0092 16.2 0.1 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Radical_SAM PF04055.21 CTQ29590.1 - 0.0051 17.2 0.0 0.091 13.1 0.0 2.2 2 0 0 2 2 2 1 Radical SAM superfamily MR_MLE_C PF13378.6 CTQ29591.1 - 5.5e-39 134.0 0.2 8.9e-39 133.3 0.2 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 CTQ29591.1 - 3.3e-08 33.7 0.2 6e-08 32.9 0.2 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Flavodoxin_1 PF00258.25 CTQ29594.1 - 4.3e-23 82.1 0.0 4.9e-23 81.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin PseudoU_synth_2 PF00849.22 CTQ29595.1 - 5.9e-29 101.2 0.0 7.7e-29 100.8 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF446 PF04287.12 CTQ29596.1 - 5.2e-34 116.2 0.9 5.8e-34 116.1 0.9 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase C Syd PF07348.12 CTQ29597.1 - 8.9e-68 227.4 0.0 1e-67 227.2 0.0 1.0 1 0 0 1 1 1 1 Syd protein (SUKH-2) N_NLPC_P60 PF12912.7 CTQ29597.1 - 0.1 12.9 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 NLPC_P60 stabilising domain, N term QueF_N PF14819.6 CTQ29598.1 - 7.1e-48 161.5 0.0 1.6e-47 160.3 0.0 1.6 2 0 0 2 2 2 1 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term QueF PF14489.6 CTQ29598.1 - 3.3e-33 113.7 0.0 1e-26 92.9 0.0 2.2 2 0 0 2 2 2 2 QueF-like protein DUF3412 PF11892.8 CTQ29599.1 - 1.7e-55 186.3 0.0 3.2e-55 185.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3412) DUF4478 PF14793.6 CTQ29599.1 - 1.9e-46 156.4 0.1 4e-46 155.4 0.1 1.6 1 0 0 1 1 1 1 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Lysine_decarbox PF03641.14 CTQ29599.1 - 7.6e-35 119.9 0.0 1.2e-34 119.3 0.0 1.3 1 0 0 1 1 1 1 Possible lysine decarboxylase LDcluster4 PF18306.1 CTQ29599.1 - 1.8e-05 24.4 0.0 3.2e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 SLOG cluster4 family DUF3961 PF13106.6 CTQ29600.1 - 0.065 12.9 0.1 0.065 12.9 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3961) ELK PF03789.13 CTQ29600.1 - 0.071 13.2 0.1 0.13 12.3 0.1 1.5 1 0 0 1 1 1 0 ELK domain SDH_alpha PF03313.15 CTQ29601.1 - 4.2e-94 315.1 11.0 5.3e-94 314.7 11.0 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain SDH_beta PF03315.15 CTQ29601.1 - 6.1e-56 189.1 0.1 1.1e-55 188.2 0.1 1.4 1 0 0 1 1 1 1 Serine dehydratase beta chain CT_C_D PF02682.16 CTQ29601.1 - 0.013 15.3 0.0 0.068 12.9 0.0 2.1 1 1 0 1 1 1 0 Carboxyltransferase domain, subdomain C and D MmgE_PrpD PF03972.14 CTQ29601.1 - 0.027 13.0 2.0 0.043 12.3 2.0 1.2 1 0 0 1 1 1 0 MmgE/PrpD family NMT1_2 PF13379.6 CTQ29602.1 - 5e-17 62.4 0.4 7.9e-17 61.8 0.4 1.2 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 CTQ29602.1 - 6.4e-17 62.2 0.0 8.6e-17 61.8 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like OpuAC PF04069.12 CTQ29602.1 - 1.3e-12 47.9 0.6 1.7e-12 47.5 0.6 1.1 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system SBP_bac_3 PF00497.20 CTQ29602.1 - 7.2e-09 35.4 0.0 1.2e-08 34.6 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1_3 PF16868.5 CTQ29602.1 - 1.1e-07 31.5 0.0 1.5e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 NMT1-like family Phosphonate-bd PF12974.7 CTQ29602.1 - 1.1e-07 31.7 0.1 1.6e-07 31.2 0.1 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein HEM4 PF02602.15 CTQ29602.1 - 0.06 12.7 0.0 0.27 10.5 0.0 1.9 2 0 0 2 2 2 0 Uroporphyrinogen-III synthase HemD Acyl-CoA_dh_M PF02770.19 CTQ29603.1 - 1.1e-09 38.4 0.1 3.1e-09 36.9 0.1 1.8 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 CTQ29603.1 - 2.9e-06 27.6 12.6 3.3e-06 27.4 10.9 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 CTQ29603.1 - 5.1e-05 23.9 0.0 0.00014 22.5 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain ArgoMid PF16487.5 CTQ29603.1 - 0.08 13.2 0.1 0.35 11.1 0.0 2.2 3 0 0 3 3 3 0 Mid domain of argonaute Sugar_tr PF00083.24 CTQ29604.1 - 2.1e-34 119.2 21.5 2.8e-34 118.8 21.5 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 CTQ29604.1 - 1.7e-24 86.4 74.4 4.8e-23 81.7 38.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 CTQ29604.1 - 1.3 7.2 6.3 2.7 6.2 0.6 2.5 1 1 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Lipoprotein_9 PF03180.14 CTQ29605.1 - 1.4e-36 125.8 0.0 1.8e-36 125.4 0.0 1.0 1 0 0 1 1 1 1 NLPA lipoprotein DUF4010 PF13194.6 CTQ29605.1 - 0.12 12.0 0.1 0.21 11.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4010) BPD_transp_1 PF00528.22 CTQ29606.1 - 6.9e-15 55.3 15.3 6.9e-15 55.3 15.3 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3487 PF11990.8 CTQ29606.1 - 1.5 8.7 14.8 0.82 9.6 0.6 3.4 1 1 3 4 4 4 0 Protein of unknown function (DUF3487) ABC_tran PF00005.27 CTQ29607.1 - 3e-33 115.3 0.0 4.3e-33 114.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 CTQ29607.1 - 1.6e-08 34.3 0.1 0.00014 21.4 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 CTQ29607.1 - 6.2e-08 32.8 0.1 0.0017 18.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 CTQ29607.1 - 9.6e-08 32.4 0.1 0.003 17.9 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 CTQ29607.1 - 0.00029 21.3 3.7 0.00069 20.0 3.4 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 CTQ29607.1 - 0.00061 19.4 0.1 0.11 12.1 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CTQ29607.1 - 0.0013 18.4 0.0 0.0025 17.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain TniB PF05621.11 CTQ29607.1 - 0.0017 17.8 0.0 0.098 12.1 0.0 2.3 2 0 0 2 2 2 1 Bacterial TniB protein AAA_23 PF13476.6 CTQ29607.1 - 0.0023 18.5 0.0 0.0037 17.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain NIL PF09383.10 CTQ29607.1 - 0.0031 17.3 0.1 0.016 15.1 0.1 2.2 1 1 0 1 1 1 1 NIL domain AAA PF00004.29 CTQ29607.1 - 0.0031 17.9 0.0 0.057 13.8 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 CTQ29607.1 - 0.0038 17.0 0.1 0.46 10.2 0.0 2.9 2 1 1 3 3 3 1 IstB-like ATP binding protein RsgA_GTPase PF03193.16 CTQ29607.1 - 0.0099 15.8 0.1 0.017 15.0 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_33 PF13671.6 CTQ29607.1 - 0.028 14.6 0.0 0.055 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 CTQ29607.1 - 0.04 13.3 0.1 2.1 7.6 0.0 2.1 2 0 0 2 2 2 0 KaiC Rad51 PF08423.11 CTQ29607.1 - 0.055 12.7 0.0 3.6 6.8 0.0 2.1 2 0 0 2 2 2 0 Rad51 NB-ARC PF00931.22 CTQ29607.1 - 0.11 11.6 0.0 0.16 11.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Pilus_CpaD PF09476.10 CTQ29607.1 - 0.12 12.1 0.1 0.23 11.2 0.1 1.4 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) SbcCD_C PF13558.6 CTQ29607.1 - 0.15 12.4 0.1 0.89 9.8 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ETF PF01012.21 CTQ29607.1 - 0.25 11.2 2.3 6.7 6.6 0.7 2.7 3 0 0 3 3 3 0 Electron transfer flavoprotein domain Bac_luciferase PF00296.20 CTQ29608.1 - 1.8e-53 182.0 0.3 2.4e-53 181.6 0.3 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Amidohydro_2 PF04909.14 CTQ29608.1 - 0.02 14.7 0.1 0.066 13.0 0.0 1.8 2 0 0 2 2 2 0 Amidohydrolase NAD_binding_9 PF13454.6 CTQ29609.1 - 3.4e-33 114.8 1.3 1.8e-30 106.0 0.1 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding DAO PF01266.24 CTQ29609.1 - 7.2e-09 35.7 3.3 4.5e-08 33.1 3.2 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CTQ29609.1 - 8.8e-08 32.3 0.1 3.8e-07 30.2 0.1 2.2 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 CTQ29609.1 - 6.1e-07 29.0 0.0 1.2e-05 24.7 0.0 2.4 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 CTQ29609.1 - 6.3e-06 25.6 0.1 0.16 11.1 0.0 2.8 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 CTQ29609.1 - 2.4e-05 24.8 0.7 0.001 19.6 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 CTQ29609.1 - 0.0026 16.7 0.1 0.0026 16.7 0.1 1.4 2 0 0 2 2 2 1 Tryptophan halogenase HI0933_like PF03486.14 CTQ29609.1 - 0.02 13.6 0.0 0.11 11.2 0.0 2.0 2 0 0 2 2 2 0 HI0933-like protein Thi4 PF01946.17 CTQ29609.1 - 0.03 13.6 0.1 0.054 12.7 0.1 1.4 1 0 0 1 1 1 0 Thi4 family GIDA PF01134.22 CTQ29609.1 - 0.12 11.5 0.1 0.96 8.5 0.1 2.0 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_binding_2 PF00890.24 CTQ29609.1 - 0.14 11.2 4.9 0.23 10.5 0.1 2.2 2 0 0 2 2 2 0 FAD binding domain Bac_luciferase PF00296.20 CTQ29610.1 - 1.1e-89 301.0 3.3 1.3e-89 300.7 3.3 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Sigma54_activat PF00158.26 CTQ29611.1 - 8.7e-67 224.0 0.0 1.3e-66 223.4 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 CTQ29611.1 - 5.4e-22 78.4 0.0 1.6e-21 76.9 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 CTQ29611.1 - 2.6e-08 34.0 0.0 5.8e-08 32.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) HTH_8 PF02954.19 CTQ29611.1 - 3.3e-08 33.2 3.4 6.8e-08 32.2 0.2 2.9 2 1 0 2 2 2 1 Bacterial regulatory protein, Fis family NMT1 PF09084.11 CTQ29611.1 - 3.4e-07 30.4 0.0 5e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 CTQ29611.1 - 4.5e-05 23.3 0.0 8.7e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 NMT1-like family Phosphonate-bd PF12974.7 CTQ29611.1 - 0.00014 21.5 0.0 0.00028 20.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein AAA_2 PF07724.14 CTQ29611.1 - 0.00041 20.5 0.0 0.0024 18.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 CTQ29611.1 - 0.00066 19.2 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA PF00004.29 CTQ29611.1 - 0.00073 20.0 0.0 0.0013 19.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SBP_bac_3 PF00497.20 CTQ29611.1 - 0.0047 16.4 0.0 0.014 14.8 0.0 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 AAA_16 PF13191.6 CTQ29611.1 - 0.0079 16.6 1.1 0.037 14.4 0.3 2.3 2 1 0 2 2 2 1 AAA ATPase domain HTH_30 PF13556.6 CTQ29611.1 - 0.015 15.1 0.4 0.046 13.5 0.4 1.8 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_17 PF12728.7 CTQ29611.1 - 0.016 15.4 0.0 0.059 13.6 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain Mg_chelatase PF01078.21 CTQ29611.1 - 0.024 14.0 0.0 1.6 8.1 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI HTH_23 PF13384.6 CTQ29611.1 - 0.037 13.8 0.0 0.094 12.5 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 CTQ29611.1 - 0.075 13.2 2.3 0.63 10.2 0.1 3.2 3 0 0 3 3 3 0 Helix-turn-helix domain AAA_22 PF13401.6 CTQ29611.1 - 0.085 13.1 0.1 0.29 11.4 0.0 1.9 2 0 0 2 2 1 0 AAA domain HTH_29 PF13551.6 CTQ29611.1 - 0.11 12.5 1.9 0.29 11.2 0.1 2.6 3 0 0 3 3 3 0 Winged helix-turn helix AAA_19 PF13245.6 CTQ29611.1 - 0.21 11.9 0.3 10 6.4 0.3 2.6 1 1 0 1 1 1 0 AAA domain OpuAC PF04069.12 CTQ29611.1 - 0.22 11.1 0.0 0.32 10.5 0.0 1.3 1 0 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system 5_3_exonuc_N PF02739.16 CTQ29612.1 - 3.9e-29 101.6 0.0 5.7e-29 101.1 0.0 1.2 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain 5_3_exonuc PF01367.20 CTQ29612.1 - 6.5e-26 90.8 0.0 1e-25 90.1 0.0 1.3 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold Fe-ADH PF00465.19 CTQ29613.1 - 2e-114 382.2 4.7 2.3e-114 382.0 4.7 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ29613.1 - 1.2e-17 64.4 0.4 3.2e-11 43.4 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase PORR PF11955.8 CTQ29613.1 - 0.2 10.5 0.0 0.29 10.0 0.0 1.1 1 0 0 1 1 1 0 Plant organelle RNA recognition domain Aldolase_II PF00596.21 CTQ29614.1 - 8.5e-49 166.0 1.0 1e-48 165.8 1.0 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Securin PF04856.13 CTQ29615.1 - 0.018 15.0 0.5 0.022 14.7 0.5 1.1 1 0 0 1 1 1 0 Securin sister-chromatid separation inhibitor MFS_1 PF07690.16 CTQ29616.1 - 2.7e-19 69.3 35.7 2.7e-19 69.3 35.7 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ29616.1 - 0.00034 19.6 26.2 0.018 13.9 23.1 2.6 1 1 1 2 2 2 1 Sugar (and other) transporter OATP PF03137.20 CTQ29616.1 - 0.00093 17.6 14.9 0.012 13.9 5.2 3.0 1 1 1 2 2 2 2 Organic Anion Transporter Polypeptide (OATP) family Viral_Beta_CD PF04530.12 CTQ29616.1 - 0.15 12.3 0.6 0.33 11.3 0.0 1.8 2 0 0 2 2 2 0 Viral Beta C/D like family Fucose_iso_N1 PF07881.12 CTQ29617.1 - 1.4e-83 278.8 0.1 2.3e-83 278.2 0.1 1.3 1 0 0 1 1 1 1 L-fucose isomerase, first N-terminal domain Fucose_iso_N2 PF07882.12 CTQ29617.1 - 7.8e-81 270.0 0.6 1.1e-80 269.4 0.6 1.2 1 0 0 1 1 1 1 L-fucose isomerase, second N-terminal domain Fucose_iso_C PF02952.17 CTQ29617.1 - 7.2e-55 184.6 0.0 1.3e-54 183.8 0.0 1.4 1 0 0 1 1 1 1 L-fucose isomerase, C-terminal domain FGGY_N PF00370.21 CTQ29618.1 - 3.9e-79 265.7 0.0 5.2e-79 265.3 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 CTQ29618.1 - 1.6e-23 83.5 0.2 2.6e-22 79.5 0.2 2.5 1 1 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 CTQ29618.1 - 1.4e-06 28.1 0.2 0.0082 15.7 0.0 2.3 2 1 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family RbsD_FucU PF05025.13 CTQ29619.1 - 6.7e-37 126.9 0.0 7.7e-37 126.7 0.0 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family Oxidored_q6 PF01058.22 CTQ29619.1 - 0.08 12.8 0.0 0.12 12.2 0.0 1.4 1 1 0 1 1 1 0 NADH ubiquinone oxidoreductase, 20 Kd subunit DeoRC PF00455.22 CTQ29620.1 - 5.2e-44 150.0 0.0 1e-43 149.1 0.0 1.4 2 0 0 2 2 2 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ29620.1 - 2.6e-19 68.7 3.0 5.5e-18 64.5 3.2 2.3 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ29620.1 - 1e-10 41.4 1.6 2.4e-10 40.2 1.6 1.6 1 0 0 1 1 1 1 HTH domain HTH_Mga PF08280.11 CTQ29620.1 - 1.8e-07 31.1 0.5 4.3e-07 29.9 0.5 1.6 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain GntR PF00392.21 CTQ29620.1 - 1.1e-06 28.2 0.4 2.6e-06 27.0 0.3 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 CTQ29620.1 - 0.0003 20.6 0.0 0.00056 19.7 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 CTQ29620.1 - 0.00035 20.5 0.8 0.00068 19.6 0.8 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TFIIE_alpha PF02002.17 CTQ29620.1 - 0.0082 16.0 0.1 0.013 15.3 0.1 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit Sigma70_r4 PF04545.16 CTQ29620.1 - 0.0082 15.6 0.2 0.018 14.6 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_36 PF13730.6 CTQ29620.1 - 0.011 15.6 0.4 0.031 14.2 0.2 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain Mga PF05043.13 CTQ29620.1 - 0.02 15.5 0.1 0.044 14.4 0.1 1.5 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_9 PF08221.11 CTQ29620.1 - 0.042 13.9 0.3 0.042 13.9 0.3 1.7 2 0 0 2 2 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_23 PF13384.6 CTQ29620.1 - 0.044 13.6 0.2 0.13 12.1 0.2 1.8 1 0 0 1 1 1 0 Homeodomain-like domain DUF1670 PF07900.11 CTQ29620.1 - 0.053 12.9 0.0 0.074 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) DUF977 PF06163.11 CTQ29620.1 - 0.056 13.4 0.1 1.4 8.9 0.0 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF977) HTH_AsnC-type PF13404.6 CTQ29620.1 - 0.057 13.3 0.3 0.14 12.0 0.3 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Put_DNA-bind_N PF06971.13 CTQ29620.1 - 0.1 12.6 0.1 0.24 11.5 0.1 1.6 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus HTH_24 PF13412.6 CTQ29620.1 - 0.14 11.7 1.3 0.23 11.1 0.4 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Phage_NinH PF06322.11 CTQ29620.1 - 0.15 12.0 0.1 0.35 10.8 0.1 1.6 1 0 0 1 1 1 0 Phage NinH protein Rrf2 PF02082.20 CTQ29620.1 - 0.15 12.4 0.2 0.33 11.3 0.2 1.5 1 0 0 1 1 1 0 Transcriptional regulator RlmM_FDX PF18125.1 CTQ29621.1 - 3e-31 107.7 0.7 7.5e-31 106.4 0.1 2.0 2 0 0 2 2 2 1 RlmM ferredoxin-like domain FtsJ PF01728.19 CTQ29621.1 - 7.5e-09 35.9 0.0 9.3e-08 32.4 0.0 2.1 2 0 0 2 2 2 1 FtsJ-like methyltransferase DUF4222 PF13973.6 CTQ29621.1 - 5.4e-05 22.7 0.5 0.69 9.6 0.0 3.5 3 0 0 3 3 3 2 Domain of unknown function (DUF4222) Spt5-NGN PF03439.13 CTQ29621.1 - 0.035 14.0 0.0 0.066 13.1 0.0 1.4 1 0 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section MIT_C PF16565.5 CTQ29621.1 - 0.14 12.1 0.0 0.3 11.0 0.0 1.5 2 0 0 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT DUF423 PF04241.15 CTQ29622.1 - 3.6e-23 81.6 6.8 3.6e-23 81.6 6.8 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF423) Phage_holin_3_6 PF07332.11 CTQ29622.1 - 0.0034 17.4 7.8 0.0034 17.4 7.8 2.1 1 1 1 2 2 2 1 Putative Actinobacterial Holin-X, holin superfamily III LysR_substrate PF03466.20 CTQ29623.1 - 6.4e-41 140.0 1.2 6.9e-41 139.9 0.5 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29623.1 - 1.1e-21 76.5 1.7 2.4e-21 75.4 1.7 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ29623.1 - 0.12 12.2 0.5 0.25 11.2 0.5 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DUF903 PF06004.12 CTQ29624.1 - 6.6e-25 86.8 2.2 7.7e-25 86.5 2.2 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF903) Aminotran_5 PF00266.19 CTQ29625.1 - 4.1e-135 450.5 0.0 4.6e-135 450.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 CTQ29625.1 - 0.00098 17.8 0.0 0.0014 17.2 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 CTQ29625.1 - 0.0054 16.1 0.1 0.013 14.8 0.1 1.6 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family ABM PF03992.16 CTQ29625.1 - 0.13 12.4 0.4 0.57 10.3 0.0 2.1 2 0 0 2 2 2 0 Antibiotic biosynthesis monooxygenase SufE PF02657.15 CTQ29626.1 - 4.6e-37 126.6 0.0 5.2e-37 126.4 0.0 1.0 1 0 0 1 1 1 1 Fe-S metabolism associated domain Nitr_red_alph_N PF14710.6 CTQ29626.1 - 0.041 14.3 1.6 7.9 7.0 0.0 2.6 3 0 0 3 3 3 0 Respiratory nitrate reductase alpha N-terminal ThiF PF00899.21 CTQ29627.1 - 2.7e-36 125.2 1.2 4.4e-36 124.5 1.2 1.3 1 1 0 1 1 1 1 ThiF family DAO PF01266.24 CTQ29627.1 - 0.00065 19.4 0.8 0.0013 18.4 0.6 1.6 2 1 0 2 2 2 1 FAD dependent oxidoreductase Sacchrp_dh_NADP PF03435.18 CTQ29627.1 - 0.0013 19.0 0.4 0.0049 17.1 0.4 2.0 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain UDPG_MGDP_dh_N PF03721.14 CTQ29627.1 - 0.0027 17.3 1.2 0.0063 16.1 1.0 1.7 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 CTQ29627.1 - 0.0027 17.6 0.1 0.0044 16.9 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 CTQ29627.1 - 0.0041 17.6 0.4 0.019 15.4 0.4 2.1 1 1 0 1 1 1 1 Putative NAD(P)-binding ELFV_dehydrog PF00208.21 CTQ29627.1 - 0.033 13.9 0.1 0.068 12.9 0.1 1.5 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FAD_binding_3 PF01494.19 CTQ29627.1 - 0.085 12.1 0.3 0.12 11.6 0.3 1.3 1 0 0 1 1 1 0 FAD binding domain Shikimate_DH PF01488.20 CTQ29627.1 - 0.095 12.8 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase MltA PF03562.17 CTQ29628.1 - 1.1e-42 146.4 1.2 1.2e-40 139.7 1.2 2.2 1 1 0 1 1 1 1 MltA specific insert domain 3D PF06725.11 CTQ29628.1 - 2.6e-25 88.4 0.0 5.4e-25 87.4 0.0 1.5 1 0 0 1 1 1 1 3D domain Death PF00531.22 CTQ29628.1 - 0.14 12.3 0.2 2.6 8.3 0.0 2.1 2 0 0 2 2 2 0 Death domain DBI_PRT PF02277.17 CTQ29629.1 - 4.9e-118 394.1 12.7 5.5e-118 394.0 12.7 1.0 1 0 0 1 1 1 1 Phosphoribosyltransferase NblA PF04485.12 CTQ29629.1 - 0.03 14.7 0.0 0.057 13.8 0.0 1.3 1 0 0 1 1 1 0 Phycobilisome degradation protein nblA CobU PF02283.16 CTQ29630.1 - 6.6e-62 208.0 0.0 7.5e-62 207.9 0.0 1.0 1 0 0 1 1 1 1 Cobinamide kinase / cobinamide phosphate guanyltransferase preATP-grasp_3 PF18301.1 CTQ29630.1 - 0.28 11.5 1.5 16 5.9 0.0 2.5 2 1 0 2 2 2 0 pre ATP-grasp 3 domain GATase_3 PF07685.14 CTQ29631.1 - 2.6e-57 193.6 0.0 3.6e-57 193.1 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 CTQ29631.1 - 7.3e-22 78.2 0.0 2.4e-21 76.5 0.0 1.8 2 0 0 2 2 2 1 AAA domain CbiA PF01656.23 CTQ29631.1 - 2.9e-21 75.8 0.0 5.2e-21 75.0 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain GATase PF00117.28 CTQ29631.1 - 3.8e-06 26.8 0.0 7.2e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 CTQ29631.1 - 0.0055 16.5 0.0 0.011 15.5 0.0 1.6 1 0 0 1 1 1 1 Peptidase C26 SNO PF01174.19 CTQ29631.1 - 0.011 15.6 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 SNO glutamine amidotransferase family ABC_tran PF00005.27 CTQ29632.1 - 1.4e-29 103.3 0.0 2.2e-29 102.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ29632.1 - 4e-12 46.6 0.1 1e-05 25.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 CTQ29632.1 - 1.9e-06 27.9 0.0 0.0082 15.9 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 CTQ29632.1 - 6.7e-06 25.7 0.0 1.2e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CTQ29632.1 - 0.00042 20.9 0.0 0.00069 20.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ29632.1 - 0.00065 19.4 0.0 0.0015 18.2 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 CTQ29632.1 - 0.0092 15.6 0.1 0.022 14.3 0.1 1.7 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 CTQ29632.1 - 0.02 13.9 0.1 0.16 10.9 0.1 2.1 1 1 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_5 PF07728.14 CTQ29632.1 - 0.027 14.4 0.1 0.16 12.0 0.1 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CTQ29632.1 - 0.036 14.5 0.1 0.082 13.3 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 CTQ29632.1 - 0.073 13.2 0.0 0.21 11.7 0.0 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase His_Phos_1 PF00300.22 CTQ29632.1 - 0.09 12.5 0.1 20 4.8 0.1 2.8 2 1 1 3 3 3 0 Histidine phosphatase superfamily (branch 1) MukB PF04310.12 CTQ29632.1 - 0.14 12.0 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 MukB N-terminal AAA_28 PF13521.6 CTQ29632.1 - 0.16 12.2 0.0 0.32 11.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CTQ29632.1 - 0.17 12.1 0.1 0.27 11.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain CbiQ PF02361.16 CTQ29633.1 - 5.2e-47 160.3 19.7 5.8e-47 160.1 19.7 1.0 1 0 0 1 1 1 1 Cobalt transport protein DUF2244 PF10003.9 CTQ29633.1 - 3.5 7.3 11.0 0.44 10.2 6.0 2.1 1 1 1 2 2 2 0 Integral membrane protein (DUF2244) CbiN PF02553.15 CTQ29634.1 - 1.1e-28 99.0 0.3 1.5e-28 98.6 0.3 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN Gram_pos_anchor PF00746.21 CTQ29634.1 - 0.21 11.6 0.3 1.9 8.5 0.0 2.1 2 0 0 2 2 2 0 LPXTG cell wall anchor motif CbiM PF01891.16 CTQ29635.1 - 3e-54 184.0 16.1 4.2e-54 183.5 16.1 1.2 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region TP_methylase PF00590.20 CTQ29636.1 - 1.5e-39 136.2 0.8 1.8e-39 135.9 0.8 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF1302 PF06980.11 CTQ29636.1 - 0.18 10.4 0.0 0.24 10.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1302) CbiK PF06180.11 CTQ29637.1 - 4.7e-103 344.1 0.0 5.3e-103 343.9 0.0 1.0 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) CbiX PF01903.17 CTQ29637.1 - 3.1e-05 24.3 0.0 0.0043 17.4 0.0 2.4 2 0 0 2 2 2 2 CbiX CbiJ PF02571.14 CTQ29638.1 - 6e-72 241.9 0.0 7.3e-72 241.7 0.0 1.0 1 0 0 1 1 1 1 Precorrin-6x reductase CbiJ/CobK TP_methylase PF00590.20 CTQ29639.1 - 3.8e-39 134.8 0.3 4.4e-39 134.6 0.3 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiG_N PF11760.8 CTQ29640.1 - 2.6e-34 117.0 0.6 6.8e-34 115.7 0.5 1.7 2 0 0 2 2 2 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.16 CTQ29640.1 - 2.1e-24 86.3 0.0 1.2e-23 83.9 0.0 2.0 2 0 0 2 2 2 1 Cobalamin synthesis G C-terminus CbiG_mid PF11761.8 CTQ29640.1 - 5.7e-09 36.0 0.0 1.2e-08 34.9 0.0 1.6 1 0 0 1 1 1 1 Cobalamin biosynthesis central region TP_methylase PF00590.20 CTQ29641.1 - 4e-45 154.4 0.8 4.7e-45 154.2 0.8 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 CTQ29641.1 - 0.075 13.4 0.0 0.23 11.8 0.0 1.8 1 1 0 1 1 1 0 Radical SAM superfamily MTS PF05175.14 CTQ29642.1 - 1e-08 34.9 0.2 3.1e-08 33.4 0.2 1.8 1 1 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 CTQ29642.1 - 1.2e-07 31.8 0.1 1.5e-07 31.4 0.1 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 CTQ29642.1 - 2.7e-07 30.5 0.1 6.6e-07 29.2 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 CTQ29642.1 - 1.8e-06 27.7 0.1 2.7e-06 27.2 0.1 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 GidB PF02527.15 CTQ29642.1 - 3.6e-06 26.4 0.0 4.2e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PrmA PF06325.13 CTQ29642.1 - 5.7e-06 25.9 0.1 7.1e-06 25.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 CTQ29642.1 - 2.3e-05 24.0 0.0 4e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_25 PF13649.6 CTQ29642.1 - 3.9e-05 24.3 0.1 0.00012 22.7 0.1 1.8 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.7 CTQ29642.1 - 6.3e-05 23.0 0.1 8.5e-05 22.5 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ29642.1 - 0.00032 21.4 0.1 0.00092 19.9 0.0 1.7 1 1 1 2 2 2 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 CTQ29642.1 - 0.0031 17.2 0.1 0.0059 16.3 0.1 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Met_10 PF02475.16 CTQ29642.1 - 0.0035 17.1 0.0 0.0044 16.8 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_11 PF08241.12 CTQ29642.1 - 0.0066 17.1 0.1 0.02 15.5 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase domain CMAS PF02353.20 CTQ29642.1 - 0.0071 15.7 0.0 0.013 14.8 0.0 1.4 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 CTQ29642.1 - 0.049 13.5 0.0 0.091 12.6 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 CTQ29642.1 - 0.068 12.9 0.0 0.29 10.8 0.0 1.8 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 Methyltransf_2 PF00891.18 CTQ29642.1 - 0.077 12.3 0.0 0.11 11.8 0.0 1.3 1 1 0 1 1 1 0 O-methyltransferase domain RrnaAD PF00398.20 CTQ29642.1 - 0.09 11.8 0.0 0.18 10.9 0.0 1.4 2 0 0 2 2 2 0 Ribosomal RNA adenine dimethylase FtsJ PF01728.19 CTQ29642.1 - 0.096 12.8 0.0 7.8 6.6 0.0 2.1 2 0 0 2 2 2 0 FtsJ-like methyltransferase DOT1 PF08123.13 CTQ29642.1 - 0.14 11.6 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 TP_methylase PF00590.20 CTQ29643.1 - 1.5e-29 103.5 0.2 2.2e-29 102.9 0.2 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiD PF01888.17 CTQ29644.1 - 4.5e-92 307.9 3.6 5.4e-92 307.7 3.6 1.1 1 0 0 1 1 1 1 CbiD DUF3042 PF11240.8 CTQ29644.1 - 0.037 14.0 0.2 0.1 12.6 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3042) CbiC PF02570.15 CTQ29645.1 - 5.8e-66 221.9 0.0 6.6e-66 221.7 0.0 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase Fucose_iso_N1 PF07881.12 CTQ29645.1 - 0.03 14.2 0.0 0.04 13.8 0.0 1.2 1 0 0 1 1 1 0 L-fucose isomerase, first N-terminal domain CobD_Cbib PF03186.13 CTQ29646.1 - 1.8e-106 355.4 1.4 2.2e-106 355.1 1.4 1.0 1 0 0 1 1 1 1 CobD/Cbib protein GATase_3 PF07685.14 CTQ29647.1 - 8e-38 130.0 0.0 1.1e-37 129.6 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 CTQ29647.1 - 1.3e-22 80.2 0.0 1.8e-22 79.7 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 CTQ29647.1 - 5.9e-18 65.4 0.2 8.9e-11 42.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain DUF1611 PF07755.11 CTQ29647.1 - 0.0021 17.3 0.0 0.0057 16.0 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF1611_C) P-loop domain MobB PF03205.14 CTQ29647.1 - 0.033 14.1 0.0 0.084 12.8 0.0 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B PRK PF00485.18 CTQ29647.1 - 0.041 13.6 0.1 2.8 7.6 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family PocR PF10114.9 CTQ29649.1 - 1.3e-43 148.6 0.1 3.5e-43 147.2 0.0 1.7 2 0 0 2 2 2 1 Sensory domain found in PocR HTH_AraC PF00165.23 CTQ29649.1 - 3.9e-26 90.6 0.5 8.7e-12 44.8 0.4 2.6 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 CTQ29649.1 - 1e-20 73.8 0.1 1.7e-20 73.1 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MIP PF00230.20 CTQ29650.1 - 1.8e-62 211.0 13.3 2.2e-62 210.7 13.3 1.0 1 0 0 1 1 1 1 Major intrinsic protein DUF4040 PF13244.6 CTQ29650.1 - 0.36 11.0 5.3 0.19 11.9 2.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4040) BMC PF00936.19 CTQ29651.1 - 1.1e-28 99.0 7.4 1.3e-28 98.8 7.4 1.0 1 0 0 1 1 1 1 BMC domain BMC PF00936.19 CTQ29652.1 - 2.6e-26 91.4 12.2 5.2e-14 52.0 4.1 2.6 3 0 0 3 3 3 2 BMC domain Dehydratase_LU PF02286.15 CTQ29653.1 - 0 1030.1 0.2 0 1029.9 0.2 1.0 1 0 0 1 1 1 1 Dehydratase large subunit Keratin_2_head PF16208.5 CTQ29653.1 - 0.078 13.1 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 Keratin type II head Dehydratase_MU PF02288.15 CTQ29654.1 - 6.4e-36 122.6 0.2 4.5e-35 119.9 0.0 2.0 2 0 0 2 2 2 1 Dehydratase medium subunit TraC PF07820.12 CTQ29654.1 - 0.15 12.4 0.1 0.47 10.8 0.0 1.8 2 0 0 2 2 2 0 TraC-like protein Dehydratase_SU PF02287.15 CTQ29655.1 - 2.2e-60 202.5 1.3 2.7e-60 202.3 1.3 1.1 1 0 0 1 1 1 1 Dehydratase small subunit NIR_SIR_ferr PF03460.17 CTQ29655.1 - 0.07 13.0 0.1 0.14 12.0 0.1 1.5 1 0 0 1 1 1 0 Nitrite/Sulfite reductase ferredoxin-like half domain kleA_kleC PF17383.2 CTQ29655.1 - 1.2 9.6 4.2 17 5.8 0.3 2.6 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A DDR PF08841.10 CTQ29656.1 - 7.9e-161 534.5 1.5 7.9e-161 534.5 1.5 2.2 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain DDR_swiveling PF18427.1 CTQ29656.1 - 8.6e-77 256.7 2.2 2.1e-76 255.4 2.2 1.7 1 0 0 1 1 1 1 DD-reactivating factor swiveling domain FtsA PF14450.6 CTQ29656.1 - 3.8e-05 24.0 0.8 0.39 11.2 0.7 2.8 2 1 0 2 2 2 2 Cell division protein FtsA Ppx-GppA PF02541.16 CTQ29656.1 - 0.018 14.5 0.6 0.074 12.5 0.1 2.1 2 0 0 2 2 2 0 Ppx/GppA phosphatase family Spore_YtfJ PF09579.10 CTQ29656.1 - 0.042 14.0 0.1 0.12 12.6 0.1 1.8 1 0 0 1 1 1 0 Sporulation protein YtfJ (Spore_YtfJ) Apocytochr_F_C PF01333.19 CTQ29656.1 - 0.068 13.2 0.1 0.17 11.9 0.1 1.7 1 0 0 1 1 1 0 Apocytochrome F, C-terminal Dehydratase_MU PF02288.15 CTQ29657.1 - 1.2e-33 115.2 0.0 1.4e-33 115.1 0.0 1.0 1 0 0 1 1 1 1 Dehydratase medium subunit BMC PF00936.19 CTQ29658.1 - 1.3e-29 102.0 6.6 1.6e-29 101.7 6.6 1.1 1 0 0 1 1 1 1 BMC domain BMC PF00936.19 CTQ29659.1 - 8.5e-21 73.7 3.8 1.1e-20 73.4 3.8 1.1 1 0 0 1 1 1 1 BMC domain PTAC PF06130.12 CTQ29660.1 - 2.9e-44 149.1 0.0 8.1e-25 86.8 0.0 2.1 2 0 0 2 2 2 2 Phosphate propanoyltransferase PDU_like PF15953.5 CTQ29661.1 - 1.8e-54 184.0 0.1 2e-54 183.8 0.1 1.0 1 0 0 1 1 1 1 Putative propanediol utilisation EutN_CcmL PF03319.13 CTQ29662.1 - 3.2e-30 104.5 0.3 3.7e-30 104.4 0.3 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutN/carboxysome Cob_adeno_trans PF01923.18 CTQ29663.1 - 4.1e-52 176.6 0.4 6.2e-52 176.0 0.4 1.3 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Haem_degrading PF03928.14 CTQ29663.1 - 4e-28 97.9 0.5 4e-28 97.9 0.5 1.8 2 0 0 2 2 2 1 Haem-degrading DUF4702 PF15774.5 CTQ29663.1 - 0.021 13.8 0.0 0.031 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4702) AAA_16 PF13191.6 CTQ29663.1 - 0.095 13.1 4.8 0.07 13.5 3.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain Aldedh PF00171.22 CTQ29664.1 - 9e-31 106.9 0.2 3.1e-25 88.6 0.2 2.1 2 0 0 2 2 2 2 Aldehyde dehydrogenase family Fe-ADH PF00465.19 CTQ29665.1 - 9.6e-107 356.9 0.9 1.1e-106 356.8 0.9 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ29665.1 - 9.2e-16 58.3 0.1 1.3e-15 57.8 0.1 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Complex1_51K PF01512.17 CTQ29666.1 - 6e-41 139.8 0.1 1.1e-40 139.0 0.1 1.4 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit RnfC_N PF13375.6 CTQ29666.1 - 7.4e-14 51.5 0.1 1.8e-13 50.3 0.1 1.7 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain SLBB PF10531.9 CTQ29666.1 - 7.8e-10 38.5 0.4 1.4e-09 37.6 0.4 1.5 1 0 0 1 1 1 1 SLBB domain Fer4_17 PF13534.6 CTQ29666.1 - 1e-07 32.4 4.3 1.7e-07 31.6 4.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 CTQ29666.1 - 9.7e-05 22.9 4.7 0.00019 22.0 4.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ29666.1 - 0.00049 20.2 5.3 0.0017 18.5 5.5 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ29666.1 - 0.0011 19.4 2.1 1.1 9.8 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ29666.1 - 0.0018 18.3 10.2 0.063 13.4 1.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 CTQ29666.1 - 0.006 16.7 5.1 0.39 10.9 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Biotin_lipoyl PF00364.22 CTQ29666.1 - 0.016 15.0 0.0 0.056 13.3 0.0 1.9 2 0 0 2 2 2 0 Biotin-requiring enzyme Fer4_2 PF12797.7 CTQ29666.1 - 0.016 15.2 12.6 0.51 10.5 2.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 CTQ29666.1 - 0.062 13.8 9.9 1.3 9.7 0.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 CTQ29666.1 - 0.068 14.1 9.7 2.5 9.1 10.5 2.3 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain BMC PF00936.19 CTQ29667.1 - 1.3e-42 143.6 10.1 5.3e-21 74.4 0.2 2.0 2 0 0 2 2 2 2 BMC domain Proteasome PF00227.26 CTQ29667.1 - 0.055 13.0 0.1 0.093 12.2 0.1 1.3 1 0 0 1 1 1 0 Proteasome subunit Formyl_trans_N PF00551.19 CTQ29667.1 - 0.061 13.1 0.3 0.18 11.6 0.1 1.8 1 1 1 2 2 2 0 Formyl transferase BMC PF00936.19 CTQ29668.1 - 6.1e-13 48.6 0.3 9.2e-13 48.0 0.3 1.2 1 0 0 1 1 1 1 BMC domain PduV-EutP PF10662.9 CTQ29669.1 - 1.1e-57 193.7 0.0 1.3e-57 193.6 0.0 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 CTQ29669.1 - 0.00027 20.9 0.0 0.65 9.9 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 CTQ29669.1 - 0.012 15.8 0.0 0.026 14.7 0.0 1.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 CTQ29669.1 - 0.018 14.5 0.0 0.024 14.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein SRPRB PF09439.10 CTQ29669.1 - 0.02 14.3 0.0 0.03 13.7 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 CTQ29669.1 - 0.035 14.2 0.0 0.46 10.6 0.0 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.6 CTQ29669.1 - 0.044 14.2 0.0 0.051 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 CTQ29669.1 - 0.088 13.3 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 CTQ29669.1 - 0.19 12.2 0.0 0.27 11.7 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Rad17 PF03215.15 CTQ29669.1 - 0.25 11.2 0.0 0.5 10.3 0.0 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain Acetate_kinase PF00871.17 CTQ29670.1 - 2.6e-148 493.9 0.0 2.9e-148 493.7 0.0 1.0 1 0 0 1 1 1 1 Acetokinase family GHMP_kinases_N PF00288.26 CTQ29671.1 - 1.9e-08 34.4 0.1 4.2e-08 33.3 0.1 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 CTQ29671.1 - 0.0071 16.7 0.0 0.013 15.8 0.0 1.4 1 0 0 1 1 1 1 GHMP kinases C terminal Aminotran_1_2 PF00155.21 CTQ29672.1 - 1e-40 140.0 0.0 1.2e-40 139.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.13 CTQ29672.1 - 0.0063 15.4 0.0 2.4 7.0 0.0 2.2 2 0 0 2 2 2 2 Allinase HTH_8 PF02954.19 CTQ29672.1 - 0.0066 16.2 2.9 0.1 12.4 0.1 3.2 4 0 0 4 4 4 1 Bacterial regulatory protein, Fis family Amidase_3 PF01520.18 CTQ29673.1 - 8.3e-50 169.3 0.3 1.2e-49 168.8 0.3 1.2 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase AMIN PF11741.8 CTQ29673.1 - 1.6e-25 89.0 0.0 2.9e-25 88.2 0.0 1.4 1 0 0 1 1 1 1 AMIN domain AA_kinase PF00696.28 CTQ29674.1 - 7.5e-34 117.4 0.3 1.1e-33 116.8 0.3 1.3 1 0 0 1 1 1 1 Amino acid kinase family Acetyltransf_1 PF00583.25 CTQ29674.1 - 3.9e-09 36.8 0.0 5.7e-08 33.0 0.0 2.5 1 1 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ29674.1 - 2e-06 28.1 0.0 2.6e-05 24.6 0.0 2.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ29674.1 - 0.00095 19.1 0.0 0.0081 16.1 0.0 2.3 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ29674.1 - 0.074 13.1 0.0 0.26 11.4 0.0 2.0 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain AAA_30 PF13604.6 CTQ29676.1 - 3.1e-32 111.9 0.6 1e-31 110.2 0.4 1.9 1 1 1 2 2 2 1 AAA domain AAA_19 PF13245.6 CTQ29676.1 - 2.7e-30 105.7 0.1 5e-30 104.8 0.1 1.5 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 CTQ29676.1 - 5e-20 72.1 0.0 9e-20 71.3 0.0 1.4 1 0 0 1 1 1 1 Helicase UvrD_C_2 PF13538.6 CTQ29676.1 - 3.1e-14 52.5 0.2 6.7e-14 51.5 0.2 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 CTQ29676.1 - 1.1e-10 41.6 1.0 3.5e-05 23.7 0.0 3.4 2 1 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_11 PF13086.6 CTQ29676.1 - 3.3e-09 36.9 0.1 5.3e-06 26.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain SH3_13 PF18335.1 CTQ29676.1 - 8.4e-08 31.9 0.0 1.8e-07 30.9 0.0 1.6 1 0 0 1 1 1 1 ATP-dependent RecD-like DNA helicase SH3 domain UvrD-helicase PF00580.21 CTQ29676.1 - 6.7e-07 29.1 0.3 1.4e-06 28.1 0.3 1.4 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_22 PF13401.6 CTQ29676.1 - 1.1e-05 25.8 0.0 2.5e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 CTQ29676.1 - 0.00012 21.5 0.0 0.00037 19.8 0.0 1.9 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_28 PF13521.6 CTQ29676.1 - 0.0037 17.5 0.1 0.0084 16.4 0.1 1.6 1 0 0 1 1 1 1 AAA domain PhoH PF02562.16 CTQ29676.1 - 0.0053 16.2 0.0 0.01 15.3 0.0 1.4 1 0 0 1 1 1 1 PhoH-like protein AAA_16 PF13191.6 CTQ29676.1 - 0.0053 17.2 0.6 0.02 15.3 0.6 2.1 1 1 0 1 1 1 1 AAA ATPase domain T2SSE PF00437.20 CTQ29676.1 - 0.0058 15.7 0.0 0.014 14.5 0.0 1.6 2 0 0 2 2 2 1 Type II/IV secretion system protein UvrD_C PF13361.6 CTQ29676.1 - 0.0072 15.7 0.1 0.014 14.8 0.1 1.4 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain MukB PF04310.12 CTQ29676.1 - 0.031 14.1 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 MukB N-terminal CbiA PF01656.23 CTQ29676.1 - 0.045 13.8 0.8 0.09 12.8 0.8 1.4 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA PF00004.29 CTQ29676.1 - 0.093 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.22 CTQ29676.1 - 0.11 12.1 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_18 PF13238.6 CTQ29676.1 - 0.15 12.6 0.1 4.6 7.8 0.1 2.9 2 1 0 2 2 2 0 AAA domain Herpes_Helicase PF02689.14 CTQ29676.1 - 0.24 9.3 0.1 4.8 5.0 0.0 2.0 2 0 0 2 2 2 0 Helicase ATPase PF06745.13 CTQ29676.1 - 0.25 10.6 0.0 0.41 10.0 0.0 1.2 1 0 0 1 1 1 0 KaiC NTPase_1 PF03266.15 CTQ29676.1 - 0.26 11.2 0.4 0.58 10.1 0.4 1.5 1 0 0 1 1 1 0 NTPase UvrD-helicase PF00580.21 CTQ29677.1 - 7e-62 209.8 0.0 1.5e-61 208.6 0.0 1.5 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 CTQ29677.1 - 5.9e-19 68.6 0.0 5.6e-17 62.2 0.0 2.6 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 CTQ29677.1 - 8.8e-19 68.3 0.0 1e-17 64.8 0.0 2.6 2 1 0 2 2 2 1 AAA domain UvrD_C_2 PF13538.6 CTQ29677.1 - 2.4e-07 30.5 0.3 0.0071 16.1 0.0 2.6 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain PDDEXK_1 PF12705.7 CTQ29677.1 - 8.8e-06 25.8 0.1 7.5e-05 22.8 0.1 2.6 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily AAA_30 PF13604.6 CTQ29677.1 - 0.00073 19.3 0.1 0.65 9.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 CTQ29677.1 - 0.015 15.6 0.4 5.9 7.2 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_11 PF13086.6 CTQ29677.1 - 0.029 14.2 0.0 0.1 12.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain Ig_mannosidase PF17753.1 CTQ29677.1 - 0.14 11.9 0.0 0.33 10.7 0.0 1.5 1 0 0 1 1 1 0 Ig-fold domain Peptidase_M16_M PF16187.5 CTQ29678.1 - 1e-51 175.9 1.8 1.8e-51 175.1 1.8 1.4 1 0 0 1 1 1 1 Middle or third domain of peptidase_M16 Peptidase_M16 PF00675.20 CTQ29678.1 - 2.3e-38 131.5 0.0 4.5e-38 130.6 0.0 1.5 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 CTQ29678.1 - 2.2e-32 112.6 0.0 7.4e-17 62.0 0.0 3.1 3 0 0 3 3 3 2 Peptidase M16 inactive domain Exonuc_V_gamma PF04257.14 CTQ29679.1 - 2.5e-299 994.9 1.0 3.3e-299 994.5 1.0 1.1 1 0 0 1 1 1 1 Exodeoxyribonuclease V, gamma subunit RecC_C PF17946.1 CTQ29679.1 - 1.3e-68 230.7 6.2 5.6e-68 228.7 6.2 2.2 1 0 0 1 1 1 1 RecC C-terminal domain Vir_act_alpha_C PF10400.9 CTQ29679.1 - 0.13 13.0 1.5 1 10.1 0.0 3.3 3 0 0 3 3 3 0 Virulence activator alpha C-term T2SSppdC PF12528.8 CTQ29680.1 - 1.4e-20 73.9 5.3 1.7e-20 73.6 5.3 1.1 1 0 0 1 1 1 1 Type II secretion prepilin peptidase dependent protein C N_methyl PF07963.12 CTQ29680.1 - 0.00018 20.9 0.2 0.00031 20.2 0.2 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif DUF2509 PF10713.9 CTQ29681.1 - 1.3e-32 112.6 4.0 1.6e-32 112.4 4.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2509) N_methyl PF07963.12 CTQ29682.1 - 1.5e-06 27.5 1.9 2.8e-06 26.6 1.9 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif N_methyl PF07963.12 CTQ29683.1 - 5e-06 25.8 0.5 9.8e-06 24.9 0.5 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif PAP_PilO PF06864.12 CTQ29683.1 - 0.035 12.9 0.1 0.048 12.5 0.1 1.2 1 0 0 1 1 1 0 Pilin accessory protein (PilO) TPR_21 PF09976.9 CTQ29683.1 - 0.096 12.4 0.3 0.14 11.9 0.3 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain Thymidylat_synt PF00303.19 CTQ29684.1 - 3.3e-128 426.5 0.0 3.6e-128 426.3 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase LGT PF01790.18 CTQ29685.1 - 5.9e-76 254.9 9.8 6.9e-76 254.7 9.8 1.0 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase DUF4191 PF13829.6 CTQ29685.1 - 0.076 12.3 0.4 2.5 7.4 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) DUF4328 PF14219.6 CTQ29685.1 - 0.17 11.4 1.1 12 5.4 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4328) DUF202 PF02656.15 CTQ29685.1 - 0.54 10.8 8.9 7.8 7.0 2.4 3.7 3 1 0 3 3 3 0 Domain of unknown function (DUF202) EamA PF00892.20 CTQ29685.1 - 1.2 9.3 15.7 0.74 10.0 1.6 3.9 4 0 0 4 4 4 0 EamA-like transporter family PEP-utilizers_C PF02896.18 CTQ29686.1 - 1.7e-105 352.3 0.0 2.7e-105 351.7 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilisers_N PF05524.13 CTQ29686.1 - 9.3e-23 80.6 1.9 9.3e-23 80.6 1.9 2.3 2 0 0 2 2 2 1 PEP-utilising enzyme, N-terminal GAF PF01590.26 CTQ29686.1 - 6.7e-17 62.4 0.1 1.9e-16 60.9 0.1 1.8 1 0 0 1 1 1 1 GAF domain PEP-utilizers PF00391.23 CTQ29686.1 - 4.2e-16 58.4 0.9 9.1e-16 57.3 0.5 1.8 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain GAF_2 PF13185.6 CTQ29686.1 - 2.1e-14 54.0 0.1 4.9e-14 52.8 0.1 1.7 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 CTQ29686.1 - 2.4e-10 40.8 0.1 7.2e-10 39.3 0.1 1.9 1 1 0 1 1 1 1 GAF domain Lipase_GDSL PF00657.22 CTQ29686.1 - 0.0054 16.7 0.0 3.8 7.4 0.0 2.3 2 0 0 2 2 2 2 GDSL-like Lipase/Acylhydrolase HpcH_HpaI PF03328.14 CTQ29686.1 - 0.05 12.7 0.0 0.12 11.5 0.0 1.6 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family NUDIX PF00293.28 CTQ29687.1 - 6.2e-27 94.2 0.0 8.3e-27 93.8 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain DUF3613 PF12266.8 CTQ29687.1 - 0.096 12.5 0.1 1.5 8.6 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3613) MutH PF02976.15 CTQ29688.1 - 2.4e-33 114.2 0.0 3.4e-33 113.7 0.0 1.2 1 0 0 1 1 1 1 DNA mismatch repair enzyme MutH TerC PF03741.16 CTQ29689.1 - 3e-53 180.2 15.2 3.9e-53 179.8 15.2 1.1 1 0 0 1 1 1 1 Integral membrane protein TerC family DUF903 PF06004.12 CTQ29690.1 - 6.8e-24 83.5 5.0 7.8e-24 83.3 5.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF903) CopK PF11525.8 CTQ29690.1 - 0.015 14.9 0.5 1.1 9.0 0.1 2.1 1 1 1 2 2 2 0 Copper resistance protein K Aldo_ket_red PF00248.21 CTQ29691.1 - 2.3e-71 240.4 0.0 2.5e-71 240.3 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family YdiH PF15930.5 CTQ29691.1 - 0.1 12.8 0.0 0.28 11.4 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function MFS_1 PF07690.16 CTQ29692.1 - 1.4e-15 57.1 44.3 1.4e-15 57.1 44.3 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF1427 PF07235.11 CTQ29692.1 - 1.1 9.3 6.4 0.55 10.2 3.4 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1427) AMP-binding PF00501.28 CTQ29693.1 - 5.8e-69 232.7 0.0 8.5e-69 232.2 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme Acyltransferase PF01553.21 CTQ29693.1 - 8.4e-17 61.1 0.0 2.2e-16 59.7 0.0 1.6 2 0 0 2 2 2 1 Acyltransferase AMP-binding_C PF13193.6 CTQ29693.1 - 0.0006 20.7 0.0 0.0014 19.5 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Peripla_BP_3 PF13377.6 CTQ29695.1 - 4.9e-38 131.1 0.7 1.1e-37 129.9 0.2 1.8 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ29695.1 - 3e-26 92.5 0.0 4.5e-26 91.9 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 CTQ29695.1 - 1.2e-21 76.3 1.8 3.1e-21 74.9 1.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ29695.1 - 7.3e-13 48.7 0.0 1.4e-12 47.7 0.0 1.5 1 1 0 1 1 1 1 Periplasmic binding protein domain HTH_Tnp_ISL3 PF13542.6 CTQ29695.1 - 0.0009 18.6 0.3 0.0034 16.8 0.3 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_3 PF01381.22 CTQ29695.1 - 0.0078 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ29695.1 - 0.026 14.9 0.3 0.13 12.7 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 CTQ29695.1 - 0.041 13.7 0.0 0.12 12.2 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain MerR PF00376.23 CTQ29695.1 - 0.049 13.4 0.2 0.11 12.3 0.2 1.6 1 0 0 1 1 1 0 MerR family regulatory protein HTH_17 PF12728.7 CTQ29695.1 - 0.063 13.5 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3853 PF12964.7 CTQ29695.1 - 0.081 13.1 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3853) HTH_26 PF13443.6 CTQ29695.1 - 0.11 12.9 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain PucR PF07905.11 CTQ29695.1 - 0.13 12.5 0.0 0.33 11.3 0.0 1.6 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family HTH_38 PF13936.6 CTQ29695.1 - 0.32 10.8 3.4 0.44 10.4 0.1 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain Acetyltransf_1 PF00583.25 CTQ29696.1 - 1.1e-12 48.2 0.0 1.4e-12 47.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 CTQ29696.1 - 3.4e-10 40.1 0.0 4.9e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ29696.1 - 2.2e-09 37.6 0.1 3.5e-09 37.0 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ29696.1 - 3.6e-09 36.6 0.0 4.5e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ29696.1 - 3.4e-05 23.9 0.0 6.2e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 CTQ29696.1 - 0.0047 17.6 0.1 0.0056 17.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ29696.1 - 0.025 14.5 0.1 0.068 13.2 0.1 1.7 1 1 0 1 1 1 0 FR47-like protein GntR PF00392.21 CTQ29697.1 - 2.2e-22 78.5 0.1 5.3e-22 77.2 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 CTQ29697.1 - 5.6e-20 72.0 10.5 8.2e-20 71.5 10.5 1.2 1 0 0 1 1 1 1 FCD domain Rrf2 PF02082.20 CTQ29697.1 - 0.026 14.9 0.0 0.051 13.9 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator TrmB PF01978.19 CTQ29697.1 - 0.07 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Glyco_hydro_1 PF00232.18 CTQ29698.1 - 7.1e-99 331.3 2.0 8.2e-99 331.1 2.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Cellulase PF00150.18 CTQ29698.1 - 0.0015 18.0 0.7 0.0029 17.1 0.7 1.4 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) PTS_EIIC PF02378.18 CTQ29699.1 - 1.2e-44 152.7 28.8 1.2e-44 152.7 28.8 1.8 2 0 0 2 2 2 1 Phosphotransferase system, EIIC Peripla_BP_3 PF13377.6 CTQ29700.1 - 9e-32 110.7 0.0 8.7e-31 107.5 0.0 2.1 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ29700.1 - 7e-29 101.1 0.0 9e-29 100.8 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 CTQ29700.1 - 4.5e-20 71.2 0.1 8.8e-20 70.2 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ29700.1 - 8e-18 64.9 0.0 1.1e-17 64.4 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 CTQ29700.1 - 2e-05 24.4 0.0 7.7e-05 22.5 0.0 1.7 2 0 0 2 2 2 1 Periplasmic binding protein PucR PF07905.11 CTQ29700.1 - 0.0018 18.5 0.0 0.0038 17.5 0.0 1.5 1 0 0 1 1 1 1 Purine catabolism regulatory protein-like family HTH_31 PF13560.6 CTQ29700.1 - 0.015 15.6 0.0 0.049 14.0 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain Orn_Arg_deC_N PF02784.16 CTQ29701.1 - 5.2e-63 212.7 0.0 6.4e-63 212.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 CTQ29701.1 - 8.2e-26 90.1 0.0 9.8e-26 89.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FAM92 PF06730.11 CTQ29702.1 - 0.15 11.5 0.3 0.21 11.0 0.3 1.2 1 0 0 1 1 1 0 FAM92 protein LysR_substrate PF03466.20 CTQ29703.1 - 1.6e-43 148.5 6.7 2.1e-43 148.1 6.7 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29703.1 - 2.2e-19 69.1 2.3 3.1e-19 68.7 0.9 2.1 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ29703.1 - 0.00022 20.9 0.1 0.00049 19.8 0.1 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_23 PF13384.6 CTQ29703.1 - 0.00097 18.9 0.0 0.0021 17.8 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 CTQ29703.1 - 0.0034 17.5 0.0 0.0089 16.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ29703.1 - 0.031 14.3 0.1 0.084 12.9 0.1 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Phage_NinH PF06322.11 CTQ29703.1 - 0.044 13.7 0.0 0.084 12.8 0.0 1.4 1 0 0 1 1 1 0 Phage NinH protein HTH_Tnp_ISL3 PF13542.6 CTQ29703.1 - 0.059 12.8 0.1 0.13 11.7 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 MarR_2 PF12802.7 CTQ29703.1 - 0.071 13.0 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 MarR family DUF2089 PF09862.9 CTQ29703.1 - 0.17 11.9 0.0 0.38 10.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) Asp_Glu_race PF01177.22 CTQ29704.1 - 5.9e-57 193.1 0.0 6.7e-57 192.9 0.0 1.0 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Pantoate_transf PF02548.15 CTQ29704.1 - 0.0076 15.7 0.3 0.012 15.0 0.1 1.4 2 0 0 2 2 2 1 Ketopantoate hydroxymethyltransferase Peripla_BP_1 PF00532.21 CTQ29704.1 - 0.067 12.6 0.2 1.3 8.4 0.0 2.7 2 1 1 3 3 3 0 Periplasmic binding proteins and sugar binding domain of LacI family Asp_Glu_race_2 PF14669.6 CTQ29704.1 - 0.17 11.5 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 Putative aspartate racemase Cupin_2 PF07883.11 CTQ29705.1 - 1e-14 54.0 0.2 1.3e-14 53.6 0.2 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 CTQ29705.1 - 7e-06 26.0 0.0 9.5e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_7 PF12973.7 CTQ29705.1 - 0.00013 21.8 0.0 0.00017 21.4 0.0 1.2 1 0 0 1 1 1 1 ChrR Cupin-like domain Cupin_3 PF05899.12 CTQ29705.1 - 0.00014 21.5 0.0 0.00017 21.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) DMSP_lyase PF16867.5 CTQ29705.1 - 0.0029 17.3 0.0 0.0035 17.0 0.0 1.1 1 0 0 1 1 1 1 Dimethlysulfonioproprionate lyase Cupin_1 PF00190.22 CTQ29705.1 - 0.0043 16.7 0.1 0.0054 16.3 0.1 1.2 1 0 0 1 1 1 1 Cupin Pirin PF02678.16 CTQ29705.1 - 0.084 12.9 0.1 0.092 12.7 0.1 1.3 1 0 0 1 1 1 0 Pirin BPD_transp_1 PF00528.22 CTQ29706.1 - 1.3e-16 60.9 24.5 1.3e-16 60.9 24.5 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ29707.1 - 9.7e-18 64.6 16.3 9.7e-18 64.6 16.3 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SNARE_assoc PF09335.11 CTQ29707.1 - 4.8 7.7 12.5 1.3 9.6 3.4 3.7 3 2 1 4 4 4 0 SNARE associated Golgi protein Gemini_mov PF01708.16 CTQ29707.1 - 6.3 6.6 7.6 5.8 6.8 0.1 3.3 4 0 0 4 4 4 0 Geminivirus putative movement protein ABC_tran PF00005.27 CTQ29708.1 - 1.5e-28 100.0 0.0 2.5e-28 99.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 CTQ29708.1 - 1.2e-07 32.5 0.0 4.1e-07 30.7 0.0 2.0 1 0 0 1 1 1 1 MalK OB fold domain TOBE_2 PF08402.10 CTQ29708.1 - 7.8e-06 26.0 0.0 2.7e-05 24.2 0.0 2.0 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 CTQ29708.1 - 0.00014 21.8 0.1 0.13 12.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 CTQ29708.1 - 0.00057 20.1 0.0 0.037 14.3 0.0 2.7 2 1 0 2 2 2 1 TOBE domain Rad17 PF03215.15 CTQ29708.1 - 0.00066 19.7 0.0 0.00098 19.1 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain CysA_C_terminal PF17850.1 CTQ29708.1 - 0.0023 18.4 0.1 0.025 15.1 0.0 2.6 2 0 0 2 2 2 1 CysA C-terminal regulatory domain SMC_N PF02463.19 CTQ29708.1 - 0.014 14.8 0.1 0.049 13.1 0.1 1.8 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ29708.1 - 0.015 15.7 0.1 0.038 14.4 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ29708.1 - 0.061 13.2 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_22 PF13401.6 CTQ29708.1 - 0.091 13.0 0.1 0.24 11.6 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ29708.1 - 0.12 12.1 0.1 0.2 11.3 0.1 1.5 1 1 0 1 1 1 0 AAA domain SBP_bac_1 PF01547.25 CTQ29709.1 - 7e-29 101.8 10.2 1.1e-28 101.2 10.2 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 CTQ29709.1 - 2.4e-24 86.6 8.2 3.1e-24 86.3 8.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SelB-wing_2 PF09106.11 CTQ29709.1 - 0.055 13.7 0.1 1.8 8.8 0.0 2.9 2 1 0 2 2 2 0 Elongation factor SelB, winged helix Porin_8 PF16966.5 CTQ29710.1 - 6.6e-191 634.0 10.1 7.7e-191 633.8 10.1 1.0 1 0 0 1 1 1 1 Porin-like glycoporin RafY Sugarporin_N PF11471.8 CTQ29710.1 - 7.8e-10 38.6 0.6 1.8e-09 37.4 0.6 1.6 1 0 0 1 1 1 1 Maltoporin periplasmic N-terminal extension WASH_WAHD PF11945.8 CTQ29710.1 - 0.017 14.6 0.0 0.025 14.1 0.0 1.1 1 0 0 1 1 1 0 WAHD domain of WASH complex DivIC PF04977.15 CTQ29710.1 - 0.068 12.9 0.2 0.13 12.1 0.2 1.4 1 0 0 1 1 1 0 Septum formation initiator Tropomyosin PF00261.20 CTQ29710.1 - 0.16 11.4 1.5 0.23 10.8 1.5 1.1 1 0 0 1 1 1 0 Tropomyosin Glyco_hydro_32N PF00251.20 CTQ29711.1 - 1.6e-105 353.0 0.2 2.3e-105 352.5 0.2 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 N-terminal domain Glyco_hydro_32C PF08244.12 CTQ29711.1 - 7.5e-23 81.3 0.0 1e-22 80.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 C terminal Glyco_hydro_43 PF04616.14 CTQ29711.1 - 3.8e-07 29.7 0.2 5.3e-05 22.7 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 LacY_symp PF01306.19 CTQ29712.1 - 2e-126 422.1 24.4 2.4e-126 421.8 24.4 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1_like PF12832.7 CTQ29712.1 - 3.2e-24 85.5 22.2 2.9e-23 82.4 20.8 2.4 1 1 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 CTQ29712.1 - 7.9e-18 64.5 41.3 1.9e-16 59.9 30.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ29712.1 - 2.7 6.7 26.3 0.83 8.4 3.2 3.5 2 2 1 3 3 3 0 Sugar (and other) transporter Peripla_BP_1 PF00532.21 CTQ29713.1 - 1.5e-47 162.4 0.0 1.9e-47 162.0 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ29713.1 - 2.8e-21 76.5 0.0 3.5e-20 73.0 0.1 2.1 2 0 0 2 2 2 1 Periplasmic binding protein-like domain LacI PF00356.21 CTQ29713.1 - 1.1e-16 60.3 0.2 1.9e-16 59.6 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ29713.1 - 0.027 14.1 0.0 3.8 7.0 0.0 2.5 3 0 0 3 3 3 0 Periplasmic binding protein domain HTH_31 PF13560.6 CTQ29713.1 - 0.13 12.7 1.0 1 9.7 0.1 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 CTQ29713.1 - 0.14 12.0 0.0 0.81 9.6 0.0 2.2 2 0 0 2 2 2 0 Homeodomain-like domain Sugar_tr PF00083.24 CTQ29714.1 - 2.3e-132 442.1 31.0 2.7e-132 441.9 31.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 CTQ29714.1 - 1e-39 136.5 57.3 1.7e-37 129.2 32.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 CTQ29714.1 - 3.1e-09 35.8 5.4 3.1e-09 35.8 5.4 1.8 2 1 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 CTQ29714.1 - 6.4e-05 21.7 7.4 6.4e-05 21.7 7.4 3.5 2 1 2 4 4 4 1 MFS/sugar transport protein OATP PF03137.20 CTQ29714.1 - 1.2 7.3 19.1 7.2 4.8 1.3 3.2 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family MFS_4 PF06779.14 CTQ29714.1 - 1.2 8.3 34.1 0.2 10.9 12.3 2.5 3 0 0 3 3 3 0 Uncharacterised MFS-type transporter YbfB adh_short_C2 PF13561.6 CTQ29715.1 - 1.1e-55 188.8 0.1 1.3e-55 188.5 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ29715.1 - 2.1e-54 184.0 0.3 2.6e-54 183.7 0.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ29715.1 - 0.00036 20.5 0.1 0.00059 19.8 0.1 1.4 1 0 0 1 1 1 1 KR domain Pectate_lyase22 PF14583.6 CTQ29716.1 - 1.6e-209 695.4 0.5 1.8e-209 695.2 0.5 1.0 1 0 0 1 1 1 1 Oligogalacturonate lyase PD40 PF07676.12 CTQ29716.1 - 1.6e-10 40.7 3.3 0.00048 20.0 0.2 4.1 4 0 0 4 4 4 3 WD40-like Beta Propeller Repeat KdgM PF06178.13 CTQ29717.1 - 8.1e-61 205.5 7.3 9.1e-61 205.3 7.3 1.0 1 0 0 1 1 1 1 Oligogalacturonate-specific porin protein (KdgM) Porin_4 PF13609.6 CTQ29717.1 - 0.00023 21.0 15.1 0.00098 19.0 12.5 2.2 1 1 0 1 1 1 1 Gram-negative porin OMP_b-brl PF13505.6 CTQ29717.1 - 0.019 15.1 16.3 1.3 9.1 16.3 3.1 1 1 0 1 1 1 0 Outer membrane protein beta-barrel domain Thiolase_N PF00108.23 CTQ29718.1 - 1.5e-102 342.4 1.3 2.2e-102 341.9 1.3 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 CTQ29718.1 - 3.2e-51 172.1 0.4 7.7e-51 170.9 0.2 1.8 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 CTQ29718.1 - 3.3e-08 33.4 1.1 9.3e-07 28.7 0.6 2.8 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 CTQ29718.1 - 0.0013 18.5 0.7 0.023 14.5 0.1 2.9 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LysR_substrate PF03466.20 CTQ29719.1 - 5.6e-25 87.9 5.3 8.4e-25 87.4 3.4 2.1 2 1 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29719.1 - 9.6e-20 70.3 0.5 1.8e-19 69.4 0.5 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Tnp_ISL3 PF13542.6 CTQ29719.1 - 0.068 12.6 0.0 0.23 10.9 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_38 PF13936.6 CTQ29719.1 - 0.13 12.0 0.4 0.26 11.1 0.4 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain BTP PF05232.12 CTQ29720.1 - 4.3e-44 148.4 13.5 2.4e-23 81.9 1.7 2.0 2 0 0 2 2 2 2 Chlorhexidine efflux transporter S_4TM PF18159.1 CTQ29720.1 - 1.6 8.0 4.8 0.44 9.8 0.3 1.9 2 0 0 2 2 2 0 SMODS-associating 4TM effector domain Saf_2TM PF18303.1 CTQ29721.1 - 0.062 12.9 0.2 0.062 12.9 0.2 2.9 3 0 0 3 3 3 0 SAVED-fused 2TM effector domain AA_permease_2 PF13520.6 CTQ29721.1 - 4.4 6.0 45.2 7.1 5.3 45.2 1.3 1 0 0 1 1 1 0 Amino acid permease Aldo_ket_red PF00248.21 CTQ29722.1 - 1.3e-48 165.7 0.0 7.4e-47 160.0 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family PilZ PF07238.14 CTQ29724.1 - 1.7e-05 25.1 0.1 0.00043 20.6 0.2 2.5 2 1 0 2 2 2 1 PilZ domain GerE PF00196.19 CTQ29725.1 - 1.6e-15 56.4 0.3 2.9e-15 55.5 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family DUF2089 PF09862.9 CTQ29725.1 - 0.058 13.4 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) Sigma70_r4 PF04545.16 CTQ29725.1 - 0.06 12.9 0.0 0.13 11.8 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 CTQ29725.1 - 0.069 12.8 0.0 0.19 11.5 0.0 1.8 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.6 CTQ29725.1 - 0.15 11.9 0.0 0.39 10.6 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain EAL PF00563.20 CTQ29726.1 - 3.3e-28 98.8 0.2 4.7e-28 98.3 0.2 1.1 1 0 0 1 1 1 1 EAL domain Fimbrial PF00419.20 CTQ29727.1 - 0.00079 19.7 0.0 0.00098 19.4 0.0 1.1 1 0 0 1 1 1 1 Fimbrial protein Fimbrial PF00419.20 CTQ29728.1 - 3.9e-16 59.7 4.5 4.7e-14 52.9 0.8 2.1 2 0 0 2 2 2 2 Fimbrial protein Usher PF00577.20 CTQ29729.1 - 2.1e-188 627.7 17.5 2.1e-188 627.7 17.5 1.4 2 0 0 2 2 2 1 Outer membrane usher protein PapC_N PF13954.6 CTQ29729.1 - 5.2e-37 127.1 0.2 1e-35 122.9 0.0 2.4 2 0 0 2 2 2 1 PapC N-terminal domain PapC_C PF13953.6 CTQ29729.1 - 5e-08 32.6 0.0 1.7e-07 30.9 0.0 2.0 1 0 0 1 1 1 1 PapC C-terminal domain PapD_N PF00345.20 CTQ29730.1 - 3.4e-42 143.3 0.1 1.5e-41 141.2 0.0 2.0 2 1 1 3 3 3 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 CTQ29730.1 - 1e-15 57.8 0.4 2.5e-15 56.5 0.4 1.7 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain GW PF13457.6 CTQ29731.1 - 0.24 12.0 3.3 3.7 8.2 0.1 2.3 2 0 0 2 2 2 0 GW (Gly-Tryp) dipeptide domain DUF1471 PF07338.13 CTQ29732.1 - 2.8e-08 33.6 1.1 3.5e-08 33.3 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) EamA PF00892.20 CTQ29733.1 - 4.2e-34 117.7 37.2 1.3e-18 67.5 17.8 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 CTQ29733.1 - 0.06 12.7 4.3 0.083 12.2 4.3 1.2 1 0 0 1 1 1 0 Triose-phosphate Transporter family Peptidase_U4 PF03419.13 CTQ29733.1 - 3.3 6.9 14.0 4.3 6.5 8.5 2.3 1 1 1 2 2 2 0 Sporulation factor SpoIIGA MarR PF01047.22 CTQ29734.1 - 5.2e-12 45.5 0.0 9.5e-12 44.7 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 CTQ29734.1 - 2e-10 40.4 0.2 5.8e-10 38.9 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 CTQ29734.1 - 1.7e-06 28.4 0.0 3.1e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.6 CTQ29734.1 - 0.00012 22.2 0.0 0.00021 21.4 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 CTQ29734.1 - 0.00021 21.3 0.3 0.0046 17.0 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HxlR PF01638.17 CTQ29734.1 - 0.0003 20.6 0.0 0.00048 19.9 0.0 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix LexA_DNA_bind PF01726.16 CTQ29734.1 - 0.018 14.8 0.0 0.038 13.8 0.0 1.6 1 0 0 1 1 1 0 LexA DNA binding domain HTH_24 PF13412.6 CTQ29734.1 - 0.041 13.4 0.0 0.07 12.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF294_C PF10335.9 CTQ29734.1 - 0.055 13.3 0.6 0.096 12.5 0.6 1.4 1 0 0 1 1 1 0 Putative nucleotidyltransferase substrate binding domain NicO PF03824.16 CTQ29735.1 - 1e-26 94.0 15.8 2.8e-18 66.3 3.1 2.1 1 1 1 2 2 2 2 High-affinity nickel-transport protein DsbD_2 PF13386.6 CTQ29735.1 - 0.12 12.3 18.2 0.024 14.6 12.4 2.6 1 1 2 3 3 3 0 Cytochrome C biogenesis protein transmembrane region YtpI PF14007.6 CTQ29735.1 - 1.3 9.2 8.6 10 6.3 0.5 3.5 2 1 1 3 3 3 0 YtpI-like protein Phage_integrase PF00589.22 CTQ29737.1 - 9.2e-49 165.5 0.0 1e-48 165.3 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family Phage_integrase PF00589.22 CTQ29738.1 - 4.6e-48 163.3 0.7 5.3e-48 163.1 0.7 1.0 1 0 0 1 1 1 1 Phage integrase family BTRD1 PF17660.1 CTQ29738.1 - 0.049 13.5 0.1 0.13 12.0 0.1 1.8 1 0 0 1 1 1 0 Bacterial tandem repeat domain 1 DUF3435 PF11917.8 CTQ29738.1 - 0.061 12.2 0.8 0.16 10.9 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3435) Fimbrial PF00419.20 CTQ29739.1 - 2.6e-22 79.7 11.0 2.6e-22 79.7 11.0 1.4 2 0 0 2 2 2 1 Fimbrial protein FimA PF16970.5 CTQ29739.1 - 0.0021 18.3 17.0 0.028 14.6 11.4 2.9 1 1 1 2 2 2 1 Type-1 fimbrial protein, A Sugarporin_N PF11471.8 CTQ29739.1 - 1.7 8.6 8.7 0.14 12.1 3.3 2.0 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension Fimbrial PF00419.20 CTQ29740.1 - 1.2e-22 80.9 0.0 1.4e-22 80.6 0.0 1.0 1 0 0 1 1 1 1 Fimbrial protein FimA PF16970.5 CTQ29740.1 - 0.0056 16.9 0.4 0.53 10.5 0.0 2.2 2 0 0 2 2 2 2 Type-1 fimbrial protein, A PapD_N PF00345.20 CTQ29741.1 - 1.3e-38 131.7 0.0 2.3e-38 130.9 0.0 1.4 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 CTQ29741.1 - 1.9e-11 44.2 0.4 5.8e-11 42.6 0.2 1.9 2 0 0 2 2 2 1 Pili assembly chaperone PapD, C-terminal domain Usher PF00577.20 CTQ29742.1 - 1.9e-220 733.4 20.9 2.4e-220 733.1 20.9 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_N PF13954.6 CTQ29742.1 - 6.3e-51 172.2 0.0 1.6e-50 170.9 0.0 1.7 1 0 0 1 1 1 1 PapC N-terminal domain PapC_C PF13953.6 CTQ29742.1 - 1.1e-24 86.0 0.0 3.1e-24 84.5 0.0 1.9 1 0 0 1 1 1 1 PapC C-terminal domain HCMVantigenic_N PF12154.8 CTQ29742.1 - 0.061 13.4 0.2 0.18 11.9 0.2 1.7 1 0 0 1 1 1 0 Glycoprotein B N-terminal antigenic domain of HCMV PEGA PF08308.11 CTQ29742.1 - 0.1 12.5 0.0 2.9 7.9 0.0 2.6 2 0 0 2 2 2 0 PEGA domain Fimbrial PF00419.20 CTQ29743.1 - 1.9e-20 73.7 2.6 2.3e-20 73.4 2.6 1.0 1 0 0 1 1 1 1 Fimbrial protein Gal-bind_lectin PF00337.22 CTQ29743.1 - 0.081 12.5 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Galactoside-binding lectin Big_3_5 PF16640.5 CTQ29744.1 - 0.057 13.6 12.2 0.054 13.7 6.1 3.1 1 1 0 2 2 2 0 Bacterial Ig-like domain (group 3) FimH_man-bind PF09160.10 CTQ29745.1 - 8.7e-63 210.3 1.1 1.6e-62 209.5 1.1 1.4 1 0 0 1 1 1 1 FimH, mannose binding Fimbrial PF00419.20 CTQ29745.1 - 1.6e-07 31.7 8.7 1.6e-07 31.7 8.7 2.6 2 2 0 2 2 2 1 Fimbrial protein EAL PF00563.20 CTQ29746.1 - 3.6e-51 174.0 0.3 5.3e-51 173.4 0.3 1.3 1 0 0 1 1 1 1 EAL domain HTH_23 PF13384.6 CTQ29746.1 - 0.00087 19.0 0.1 0.0042 16.8 0.1 2.2 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 CTQ29746.1 - 0.0022 18.1 0.1 0.018 15.1 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_20 PF12840.7 CTQ29746.1 - 0.12 12.4 4.2 3.2 7.9 0.1 3.5 3 0 0 3 3 3 0 Helix-turn-helix domain GerE PF00196.19 CTQ29746.1 - 0.12 11.9 0.1 0.22 11.1 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Acetyltransf_CG PF14542.6 CTQ29747.1 - 1.8e-21 76.0 0.0 2.1e-21 75.9 0.0 1.0 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_1 PF00583.25 CTQ29747.1 - 2.6e-05 24.4 0.0 2.9e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ29747.1 - 5e-05 23.2 0.0 6.2e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ29747.1 - 0.00038 20.8 0.0 0.00044 20.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ29747.1 - 0.0044 17.0 0.0 0.0047 16.9 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 CTQ29747.1 - 0.0064 16.6 0.0 0.0085 16.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Fer4_19 PF06902.11 CTQ29748.1 - 6.4e-28 96.6 0.1 7.2e-28 96.5 0.1 1.0 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Ytca PF17090.5 CTQ29749.1 - 7.9e-19 67.9 10.2 1e-18 67.5 10.2 1.2 1 0 0 1 1 1 1 Uncharacterised protein family HlyD_3 PF13437.6 CTQ29750.1 - 1.9e-18 67.1 2.4 1.9e-12 47.8 0.1 2.9 2 2 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 CTQ29750.1 - 1.2e-16 60.2 1.2 2.9e-14 52.6 0.0 3.0 3 0 0 3 3 3 2 Biotin-lipoyl like HlyD_D23 PF16576.5 CTQ29750.1 - 2.7e-15 56.2 2.3 2.8e-13 49.6 2.3 2.5 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 CTQ29750.1 - 0.00046 20.0 0.0 0.00091 19.1 0.0 1.7 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 CTQ29750.1 - 0.0016 18.2 0.0 2.7 7.9 0.0 2.8 3 0 0 3 3 3 2 Biotin-requiring enzyme HlyD_2 PF12700.7 CTQ29750.1 - 0.12 11.1 0.0 1.7 7.3 0.0 2.0 2 0 0 2 2 2 0 HlyD family secretion protein Baculo_PEP_C PF04513.12 CTQ29750.1 - 0.19 11.7 1.8 0.36 10.9 0.0 2.2 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus FUSC PF04632.12 CTQ29751.1 - 2.1e-79 267.8 50.4 2.4e-79 267.6 50.4 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family FUSC_2 PF13515.6 CTQ29751.1 - 3.9e-07 30.2 15.4 3.9e-07 30.2 15.4 2.6 2 0 0 2 2 2 1 Fusaric acid resistance protein-like ALMT PF11744.8 CTQ29751.1 - 0.0012 17.8 1.4 0.0012 17.8 1.4 2.3 2 0 0 2 2 2 1 Aluminium activated malate transporter Flagellin_N PF00669.20 CTQ29751.1 - 0.045 13.9 1.9 0.9 9.6 1.1 2.3 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region OEP PF02321.18 CTQ29752.1 - 1.2e-34 119.7 30.3 4.1e-20 72.4 11.0 2.1 2 0 0 2 2 2 2 Outer membrane efflux protein DUF1889 PF08986.10 CTQ29754.1 - 1.4e-45 154.5 0.0 1.6e-45 154.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1889) FMN_red PF03358.15 CTQ29754.1 - 0.14 11.9 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 NADPH-dependent FMN reductase PTR2 PF00854.21 CTQ29755.1 - 3.7e-63 213.7 27.2 5.1e-63 213.3 24.7 2.5 1 1 1 2 2 2 1 POT family MFS_1 PF07690.16 CTQ29755.1 - 2e-21 76.3 69.6 2.6e-17 62.8 41.9 2.2 1 1 0 2 2 2 2 Major Facilitator Superfamily YfhO PF09586.10 CTQ29755.1 - 0.87 7.7 13.7 0.089 11.0 5.2 2.2 2 0 0 2 2 2 0 Bacterial membrane protein YfhO ArsC PF03960.15 CTQ29756.1 - 1.2e-18 66.8 0.0 1.5e-18 66.6 0.0 1.1 1 0 0 1 1 1 1 ArsC family PGM_PMM_IV PF00408.20 CTQ29756.1 - 0.0028 17.8 0.0 0.01 16.0 0.0 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Glutaredoxin PF00462.24 CTQ29756.1 - 0.01 16.0 0.0 0.023 14.9 0.0 1.8 1 1 0 1 1 1 0 Glutaredoxin MEDS PF14417.6 CTQ29756.1 - 0.042 13.7 0.0 0.058 13.2 0.0 1.2 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain ArsB PF02040.15 CTQ29757.1 - 2.5e-151 504.7 31.2 2.9e-151 504.6 31.2 1.0 1 0 0 1 1 1 1 Arsenical pump membrane protein CitMHS PF03600.16 CTQ29757.1 - 3.2e-22 79.1 47.2 3.2e-22 79.1 47.2 2.0 1 1 1 2 2 2 1 Citrate transporter Na_sulph_symp PF00939.19 CTQ29757.1 - 0.0062 15.6 31.7 0.022 13.8 17.0 2.8 2 1 1 3 3 3 2 Sodium:sulfate symporter transmembrane region PsaX PF08078.12 CTQ29757.1 - 0.077 13.0 0.3 0.077 13.0 0.3 2.3 2 0 0 2 2 2 0 PsaX family HTH_5 PF01022.20 CTQ29758.1 - 2.1e-15 56.3 1.4 3.3e-15 55.7 1.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 CTQ29758.1 - 1.8e-08 34.3 0.3 2.7e-08 33.8 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 CTQ29758.1 - 0.018 14.6 0.1 0.029 13.9 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding YCII PF03795.14 CTQ29759.1 - 2e-10 40.9 0.0 2.3e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 YCII-related domain DUF1349 PF07081.11 CTQ29760.1 - 1.2e-65 220.6 0.0 1.3e-65 220.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1349) GH43_C2 PF17851.1 CTQ29760.1 - 6.2e-05 22.8 0.0 8e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Beta xylosidase C-terminal Concanavalin A-like domain LysR_substrate PF03466.20 CTQ29762.1 - 7e-30 103.9 0.0 9.9e-30 103.5 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29762.1 - 1.5e-22 79.3 0.1 2.7e-22 78.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_28 PF13518.6 CTQ29762.1 - 0.0069 16.5 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_30 PF13556.6 CTQ29762.1 - 0.0076 16.0 0.1 0.018 14.9 0.1 1.6 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain MarR_2 PF12802.7 CTQ29762.1 - 0.023 14.6 0.0 0.044 13.7 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_8 PF02954.19 CTQ29762.1 - 0.026 14.3 0.0 0.063 13.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family MarR PF01047.22 CTQ29762.1 - 0.12 12.3 0.0 0.3 11.0 0.0 1.7 1 0 0 1 1 1 0 MarR family Flavodoxin_2 PF02525.17 CTQ29764.1 - 2.8e-37 128.4 0.0 3.4e-37 128.1 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 CTQ29764.1 - 0.0031 17.3 0.0 0.0064 16.2 0.0 1.7 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Aldo_ket_red PF00248.21 CTQ29765.1 - 3.4e-65 220.2 0.0 3.8e-65 220.0 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family B12-binding PF02310.19 CTQ29765.1 - 0.05 13.6 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 B12 binding domain DUF1314 PF07013.11 CTQ29765.1 - 0.06 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1314) CMD PF02627.20 CTQ29766.1 - 1e-38 131.2 0.7 3.4e-18 65.5 0.0 2.3 2 0 0 2 2 2 2 Carboxymuconolactone decarboxylase family NAD_binding_4 PF07993.12 CTQ29767.1 - 8.7e-10 38.2 0.1 9.7e-10 38.0 0.1 1.0 1 0 0 1 1 1 1 Male sterility protein Epimerase PF01370.21 CTQ29767.1 - 0.0012 18.3 0.0 0.0013 18.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 CTQ29767.1 - 0.0024 17.0 0.0 0.0026 17.0 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 CTQ29767.1 - 0.0068 16.3 0.0 0.0076 16.2 0.0 1.1 1 0 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 CTQ29767.1 - 0.027 13.9 0.0 0.027 13.9 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Semialdhyde_dh PF01118.24 CTQ29767.1 - 0.18 12.3 0.0 0.18 12.3 0.0 1.1 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain FUSC_2 PF13515.6 CTQ29768.1 - 4.2e-06 26.9 7.5 4.7e-06 26.7 7.5 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein-like GerE PF00196.19 CTQ29769.1 - 1.3e-16 59.9 0.2 2.3e-16 59.1 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Response_reg PF00072.24 CTQ29769.1 - 3.1e-16 59.5 0.0 4.7e-16 58.9 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Sigma70_r4 PF04545.16 CTQ29769.1 - 0.00017 21.0 0.1 0.00039 19.9 0.0 1.6 1 1 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 CTQ29769.1 - 0.00021 20.9 0.3 0.00046 19.8 0.3 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 CTQ29769.1 - 0.079 12.8 0.0 0.2 11.5 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_Tnp_4 PF13613.6 CTQ29769.1 - 0.18 11.6 0.1 0.4 10.5 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease LIP PF03583.14 CTQ29770.1 - 3.8e-20 72.4 0.1 5.2e-20 71.9 0.1 1.2 1 0 0 1 1 1 1 Secretory lipase Hydrolase_4 PF12146.8 CTQ29770.1 - 5.7e-10 38.9 0.0 1.3e-09 37.6 0.0 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 CTQ29770.1 - 1.5e-09 38.8 0.1 2.1e-09 38.3 0.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 CTQ29770.1 - 2.7e-06 27.1 0.0 8.6e-05 22.2 0.0 2.4 2 1 0 2 2 2 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 CTQ29770.1 - 1.5e-05 24.6 0.3 0.0073 15.8 0.0 2.3 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_3 PF07859.13 CTQ29770.1 - 0.00082 19.3 0.3 0.056 13.3 0.3 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_1 PF00561.20 CTQ29770.1 - 0.0011 18.7 0.2 0.0015 18.2 0.2 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Chlorophyllase PF07224.11 CTQ29770.1 - 0.0032 16.5 0.0 0.0064 15.5 0.0 1.4 1 0 0 1 1 1 1 Chlorophyllase Chlorophyllase2 PF12740.7 CTQ29770.1 - 0.014 14.3 0.0 0.027 13.4 0.0 1.5 1 0 0 1 1 1 0 Chlorophyllase enzyme Abhydrolase_2 PF02230.16 CTQ29770.1 - 0.067 13.0 0.0 2.2 8.0 0.0 2.2 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Esterase PF00756.20 CTQ29770.1 - 0.082 12.5 0.1 3 7.4 0.0 2.9 4 0 0 4 4 4 0 Putative esterase rve PF00665.26 CTQ29771.1 - 1e-16 61.2 0.1 1.2e-16 60.9 0.1 1.1 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 CTQ29771.1 - 2.7e-06 27.0 0.0 4.1e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_1_2 PF13586.6 CTQ29771.1 - 0.022 15.1 0.0 0.032 14.6 0.0 1.3 1 0 0 1 1 1 0 Transposase DDE domain rve_2 PF13333.6 CTQ29771.1 - 0.03 14.5 0.4 0.07 13.3 0.1 1.8 2 0 0 2 2 2 0 Integrase core domain LysR_substrate PF03466.20 CTQ29772.1 - 1.6e-23 83.2 1.3 1.6e-23 83.2 1.3 1.8 1 1 1 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29772.1 - 2.8e-13 49.6 0.2 6.7e-13 48.4 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ29772.1 - 0.017 15.0 0.2 0.11 12.4 0.2 2.5 2 0 0 2 2 2 0 MarR family MFS_1 PF07690.16 CTQ29773.1 - 2.5e-39 135.2 47.7 4.8e-39 134.3 47.7 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ29773.1 - 8.9e-09 34.7 28.8 5e-07 29.0 15.4 2.3 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 CTQ29773.1 - 0.0011 17.9 11.1 0.0011 17.9 11.1 2.1 2 0 0 2 2 2 2 MFS_1 like family MTABC_N PF16185.5 CTQ29773.1 - 0.048 13.2 0.6 0.12 11.9 0.6 1.7 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region Peptidase_M23 PF01551.22 CTQ29774.1 - 1.4e-30 105.4 1.7 3.1e-30 104.2 1.7 1.6 1 0 0 1 1 1 1 Peptidase family M23 LysM PF01476.20 CTQ29774.1 - 9.7e-16 57.6 2.1 1e-15 57.5 0.0 2.1 3 0 0 3 3 3 1 LysM domain Biotin_lipoyl_2 PF13533.6 CTQ29774.1 - 0.0055 16.5 0.0 0.16 11.8 0.0 2.5 2 0 0 2 2 2 1 Biotin-lipoyl like RnfC_N PF13375.6 CTQ29774.1 - 0.023 14.6 0.0 0.69 9.9 0.0 2.5 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain OapA PF04225.12 CTQ29774.1 - 0.15 12.2 0.0 0.4 10.8 0.0 1.7 2 0 0 2 2 2 0 Opacity-associated protein A LysM-like domain NUDIX PF00293.28 CTQ29775.1 - 6.5e-22 78.0 0.0 8.8e-22 77.6 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Nrap_D4 PF17405.2 CTQ29775.1 - 0.13 11.6 0.0 0.21 10.9 0.0 1.4 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 tRNA-synt_2 PF00152.20 CTQ29776.1 - 1.1e-81 274.4 0.2 1.4e-81 274.0 0.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 CTQ29776.1 - 5.9e-15 55.0 0.1 1.1e-14 54.2 0.1 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 CTQ29776.1 - 3.8e-05 23.3 0.9 0.1 12.1 0.1 2.9 3 0 0 3 3 3 2 tRNA synthetases class II core domain (F) PCRF PF03462.18 CTQ29777.1 - 1.2e-56 191.7 3.0 2.3e-56 190.7 0.2 2.0 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 CTQ29777.1 - 8.8e-41 138.5 1.4 1.5e-40 137.7 1.4 1.4 1 0 0 1 1 1 1 RF-1 domain TcpS PF17456.2 CTQ29777.1 - 0.01 15.9 0.9 4.9 7.2 0.2 2.5 2 0 0 2 2 2 0 Toxin-coregulated pilus protein S DUF2408 PF10303.9 CTQ29777.1 - 0.041 14.5 2.5 5.9 7.5 0.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2408) MCU PF04678.13 CTQ29777.1 - 0.3 11.2 1.9 0.9 9.6 0.2 2.1 2 0 0 2 2 2 0 Mitochondrial calcium uniporter Tup_N PF08581.10 CTQ29777.1 - 0.81 10.0 8.2 3.2 8.1 3.1 2.4 2 0 0 2 2 2 0 Tup N-terminal DUF4140 PF13600.6 CTQ29777.1 - 1.1 9.7 7.2 2.7 8.5 0.9 2.7 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) BLOC1_2 PF10046.9 CTQ29777.1 - 2.8 8.3 8.7 3.5 8.0 0.1 3.2 3 0 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sugarporin_N PF11471.8 CTQ29777.1 - 6.3 6.8 6.5 0.3 11.1 0.8 1.8 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension DHHA1 PF02272.19 CTQ29778.1 - 1.4e-27 96.8 0.0 3.8e-27 95.4 0.0 1.8 2 0 0 2 2 2 1 DHHA1 domain RecJ_OB PF17768.1 CTQ29778.1 - 7e-19 68.1 0.0 1.1e-18 67.4 0.0 1.4 1 0 0 1 1 1 1 RecJ OB domain DHH PF01368.20 CTQ29778.1 - 2.8e-08 33.9 0.0 5e-08 33.1 0.0 1.4 1 0 0 1 1 1 1 DHH family Glyco_transf_4 PF13439.6 CTQ29778.1 - 0.14 12.1 0.2 0.28 11.2 0.2 1.5 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Thioredoxin_2 PF13098.6 CTQ29779.1 - 5.9e-28 97.5 0.0 8.7e-28 96.9 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain DsbC_N PF10411.9 CTQ29779.1 - 3.3e-15 55.3 0.0 8.8e-15 53.9 0.1 1.6 2 0 0 2 2 2 1 Disulfide bond isomerase protein N-terminus Thioredoxin_4 PF13462.6 CTQ29779.1 - 2.6e-07 30.9 0.0 0.026 14.7 0.0 2.4 1 1 1 2 2 2 2 Thioredoxin DSBA PF01323.20 CTQ29779.1 - 3.8e-07 30.1 0.1 0.017 14.9 0.0 2.5 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin PF00085.20 CTQ29779.1 - 0.0082 16.1 0.0 1.2 9.2 0.0 2.4 2 0 0 2 2 2 1 Thioredoxin Glutaredoxin PF00462.24 CTQ29779.1 - 0.15 12.3 0.0 1.1 9.5 0.0 2.4 3 0 0 3 3 3 0 Glutaredoxin TraF PF13728.6 CTQ29779.1 - 0.17 11.7 0.1 1.2 8.9 0.0 2.2 1 1 2 3 3 3 0 F plasmid transfer operon protein Phage_integrase PF00589.22 CTQ29780.1 - 4.7e-56 189.3 0.0 6.5e-56 188.8 0.0 1.2 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 CTQ29780.1 - 1e-25 89.8 2.4 1e-25 89.8 2.4 2.3 2 1 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 CTQ29780.1 - 2.9e-07 30.9 1.5 1.3e-06 28.7 0.1 2.5 2 1 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Flavodoxin_1 PF00258.25 CTQ29781.1 - 1.4e-25 90.2 0.0 1.6e-25 90.0 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 CTQ29781.1 - 0.013 15.2 0.0 0.028 14.1 0.0 1.6 1 1 0 1 1 1 0 Flavodoxin domain Cpta_toxin PF07254.12 CTQ29782.1 - 2.1e-55 186.2 10.7 2.3e-55 186.1 10.7 1.0 1 0 0 1 1 1 1 Membrane-bound toxin component of toxin-antitoxin system PMT PF02366.18 CTQ29782.1 - 0.017 14.7 1.3 0.026 14.1 1.3 1.3 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Sdh5 PF03937.16 CTQ29783.1 - 7.3e-25 86.7 0.4 8.4e-25 86.5 0.4 1.0 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase RE_XamI PF09572.10 CTQ29783.1 - 0.04 13.6 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 XamI restriction endonuclease GP88 PF17338.2 CTQ29783.1 - 0.15 11.5 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Gene product 88 GCV_T PF01571.21 CTQ29784.1 - 7.3e-10 38.7 0.0 2.3e-09 37.0 0.0 1.7 1 1 1 2 2 2 1 Aminomethyltransferase folate-binding domain HlyIII PF03006.20 CTQ29785.1 - 3.5e-39 134.8 20.2 4.1e-39 134.6 20.2 1.0 1 0 0 1 1 1 1 Haemolysin-III related Claudin_2 PF13903.6 CTQ29785.1 - 1.8 8.3 16.1 0.68 9.7 5.2 2.6 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction SID-1_RNA_chan PF13965.6 CTQ29785.1 - 6.2 5.1 9.0 6.6 5.0 9.0 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 ASCH PF04266.14 CTQ29787.1 - 6.9e-15 55.6 0.0 7.7e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 ASCH domain DUF3850 PF12961.7 CTQ29787.1 - 0.00045 20.2 0.1 0.00076 19.5 0.1 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF3850) SH3_9 PF14604.6 CTQ29787.1 - 0.14 12.0 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Variant SH3 domain HTH_6 PF01418.17 CTQ29788.1 - 1.1e-15 57.3 0.1 7.9e-15 54.6 0.0 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 CTQ29788.1 - 9.9e-14 51.3 0.0 1.6e-13 50.6 0.0 1.3 1 0 0 1 1 1 1 SIS domain HTH_IclR PF09339.10 CTQ29788.1 - 0.00035 20.3 0.0 0.00076 19.2 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 CTQ29788.1 - 0.00037 20.0 0.0 0.00067 19.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding LacI PF00356.21 CTQ29788.1 - 0.00071 19.3 0.0 0.0018 18.1 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family RepL PF05732.11 CTQ29788.1 - 0.0017 17.8 0.1 0.0026 17.2 0.1 1.2 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_Crp_2 PF13545.6 CTQ29788.1 - 0.0035 17.3 0.0 0.0086 16.0 0.0 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_17 PF12728.7 CTQ29788.1 - 0.01 16.0 0.0 0.025 14.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 CTQ29788.1 - 0.012 15.4 0.0 0.024 14.5 0.0 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 CTQ29788.1 - 0.016 15.2 0.0 0.036 14.0 0.0 1.6 1 0 0 1 1 1 0 HTH domain TrmB PF01978.19 CTQ29788.1 - 0.018 14.9 0.1 0.036 14.0 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 CTQ29788.1 - 0.02 14.8 0.0 0.051 13.5 0.0 1.7 1 0 0 1 1 1 0 MarR family SIS_2 PF13580.6 CTQ29788.1 - 0.022 14.8 0.1 3.2 7.8 0.0 2.2 1 1 1 2 2 2 0 SIS domain HTH_50 PF18024.1 CTQ29788.1 - 0.045 13.4 0.3 0.15 11.7 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.22 CTQ29788.1 - 0.075 13.1 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix GntR PF00392.21 CTQ29788.1 - 0.096 12.3 0.0 0.19 11.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family TetR_N PF00440.23 CTQ29788.1 - 0.12 12.2 0.1 0.29 11.0 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_Tnp_ISL3 PF13542.6 CTQ29788.1 - 0.12 11.8 0.2 0.55 9.7 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 CTQ29788.1 - 0.14 12.0 0.0 0.33 10.8 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_38 PF13936.6 CTQ29788.1 - 0.15 11.8 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Glyco_hydro_1 PF00232.18 CTQ29789.1 - 9.4e-132 439.6 2.5 1.1e-131 439.4 2.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Cellulase PF00150.18 CTQ29789.1 - 0.0034 16.9 0.1 0.0057 16.1 0.1 1.3 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) DsbC PF11412.8 CTQ29791.1 - 5.7e-17 61.9 0.0 1e-16 61.1 0.0 1.4 1 0 0 1 1 1 1 Disulphide bond corrector protein DsbC Thioredoxin_7 PF13899.6 CTQ29791.1 - 1.1e-12 47.9 0.1 1.9e-12 47.2 0.1 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredox_DsbH PF03190.15 CTQ29791.1 - 0.001 19.0 0.0 0.0018 18.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin PF00085.20 CTQ29791.1 - 0.03 14.3 0.1 0.054 13.5 0.1 1.3 1 0 0 1 1 1 0 Thioredoxin Thioredoxin_2 PF13098.6 CTQ29791.1 - 0.048 14.1 0.0 0.079 13.4 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain IncE PF17627.2 CTQ29791.1 - 1.4 9.0 4.1 0.61 10.1 0.8 2.1 1 1 1 2 2 2 0 Inclusion membrane protein E Thioredoxin_4 PF13462.6 CTQ29792.1 - 3.7e-20 72.7 0.0 4.4e-20 72.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 CTQ29792.1 - 1.8e-15 57.2 1.8 4.1e-14 52.8 1.8 2.1 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 CTQ29792.1 - 7.9e-12 45.6 0.2 1.6e-10 41.4 0.2 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 CTQ29792.1 - 0.00028 20.9 0.0 0.4 10.8 0.0 2.3 2 0 0 2 2 2 2 Thioredoxin domain Thioredoxin PF00085.20 CTQ29792.1 - 0.0015 18.5 0.1 0.0051 16.8 0.0 1.8 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_8 PF13905.6 CTQ29792.1 - 0.06 13.7 0.0 0.24 11.8 0.0 1.9 2 0 0 2 2 2 0 Thioredoxin-like DUF411 PF04214.13 CTQ29792.1 - 0.076 13.0 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF AhpC-TSA PF00578.21 CTQ29793.1 - 2.7e-13 49.9 0.0 3.6e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 CTQ29793.1 - 1.5e-11 44.2 0.0 1.9e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin PF00085.20 CTQ29793.1 - 6.4e-09 35.7 0.0 2.8e-05 24.0 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_8 PF13905.6 CTQ29793.1 - 4.3e-07 30.2 0.0 8.9e-07 29.2 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 CTQ29793.1 - 7.3e-06 26.4 0.0 1.4e-05 25.5 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain TraF PF13728.6 CTQ29793.1 - 0.0033 17.3 0.0 0.0063 16.4 0.0 1.4 1 1 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_9 PF14595.6 CTQ29793.1 - 0.027 14.3 0.0 0.047 13.5 0.0 1.4 2 0 0 2 2 2 0 Thioredoxin adh_short_C2 PF13561.6 CTQ29794.1 - 6.5e-55 186.2 3.8 7.6e-55 186.0 3.8 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ29794.1 - 2.1e-46 157.9 3.2 2.6e-46 157.5 3.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ29794.1 - 3.7e-14 53.0 2.7 5.4e-14 52.5 2.7 1.2 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 CTQ29794.1 - 0.0026 17.1 0.3 0.018 14.4 0.2 2.2 2 1 1 3 3 3 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 CTQ29794.1 - 0.0065 16.0 0.4 0.013 15.0 0.4 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 CTQ29794.1 - 0.085 12.2 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase GDC-P PF02347.16 CTQ29795.1 - 4.2e-202 671.7 3.9 2.3e-190 633.0 0.9 3.0 2 1 0 2 2 2 2 Glycine cleavage system P-protein Beta_elim_lyase PF01212.21 CTQ29795.1 - 1.6e-07 30.9 0.1 4.1e-07 29.6 0.1 1.6 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 CTQ29795.1 - 0.00014 20.9 1.1 0.0034 16.4 0.0 2.2 2 0 0 2 2 2 1 Aminotransferase class-V Pyridoxal_deC PF00282.19 CTQ29795.1 - 0.021 13.5 0.0 4.5 5.9 0.0 2.4 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain Aminotran_1_2 PF00155.21 CTQ29795.1 - 0.066 12.4 0.0 0.25 10.4 0.0 1.9 2 0 0 2 2 2 0 Aminotransferase class I and II GCV_H PF01597.19 CTQ29796.1 - 8.8e-50 167.7 0.2 9.7e-50 167.5 0.2 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein RnfC_N PF13375.6 CTQ29796.1 - 0.0024 17.8 0.0 0.0032 17.4 0.0 1.3 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Biotin_lipoyl PF00364.22 CTQ29796.1 - 0.02 14.7 0.2 0.051 13.4 0.2 1.7 1 1 1 2 2 2 0 Biotin-requiring enzyme GCV_T PF01571.21 CTQ29797.1 - 1.2e-79 267.3 0.2 1.5e-79 267.0 0.2 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 CTQ29797.1 - 4.8e-14 52.0 0.1 1e-13 51.0 0.1 1.5 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain POPLD PF08170.12 CTQ29797.1 - 0.041 14.2 0.0 0.077 13.4 0.0 1.4 1 0 0 1 1 1 0 POPLD (NUC188) domain FAD_binding_3 PF01494.19 CTQ29798.1 - 5e-30 104.9 0.1 6.8e-30 104.5 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 CTQ29798.1 - 1.7e-05 24.1 5.7 0.058 12.4 4.7 3.1 2 1 0 2 2 2 1 Lycopene cyclase protein DAO PF01266.24 CTQ29798.1 - 0.0001 22.0 3.8 0.00015 21.5 2.8 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CTQ29798.1 - 0.00012 22.3 0.7 0.00031 20.9 0.7 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 CTQ29798.1 - 0.00012 21.3 1.3 0.00012 21.3 1.3 1.9 2 0 0 2 2 2 1 FAD binding domain Trp_halogenase PF04820.14 CTQ29798.1 - 0.00018 20.5 3.8 0.003 16.5 0.2 2.2 2 0 0 2 2 2 2 Tryptophan halogenase SE PF08491.10 CTQ29798.1 - 0.00018 20.7 0.0 0.00033 19.8 0.0 1.4 1 0 0 1 1 1 1 Squalene epoxidase Thi4 PF01946.17 CTQ29798.1 - 0.0019 17.5 0.4 0.066 12.5 0.4 2.2 2 0 0 2 2 2 1 Thi4 family Pyr_redox PF00070.27 CTQ29798.1 - 0.0025 18.3 0.1 0.0051 17.4 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 CTQ29798.1 - 0.0064 15.8 0.1 0.013 14.8 0.1 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ29798.1 - 0.025 13.9 1.0 0.042 13.1 1.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ29798.1 - 0.076 11.7 2.2 0.32 9.6 1.5 1.9 2 0 0 2 2 2 0 HI0933-like protein IlvN PF07991.12 CTQ29798.1 - 0.13 11.8 0.0 0.4 10.2 0.0 1.8 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 CTQ29798.1 - 0.15 12.6 0.1 3.4 8.2 0.1 2.3 1 1 0 1 1 1 0 Putative NAD(P)-binding 3HCDH_N PF02737.18 CTQ29798.1 - 0.31 10.9 1.6 0.87 9.4 1.6 1.9 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 CTQ29799.1 - 3.5e-26 92.3 0.2 4.3e-26 92.0 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 CTQ29799.1 - 8.8e-06 25.0 0.1 0.42 9.6 0.0 3.0 3 0 0 3 3 3 3 Lycopene cyclase protein Pyr_redox_2 PF07992.14 CTQ29799.1 - 1.6e-05 24.3 0.0 0.056 12.7 0.0 2.1 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 CTQ29799.1 - 8e-05 21.7 0.7 0.096 11.5 0.2 2.3 2 1 0 2 2 2 2 Tryptophan halogenase DAO PF01266.24 CTQ29799.1 - 9.2e-05 22.2 2.2 0.00027 20.6 0.9 2.0 1 1 1 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 CTQ29799.1 - 0.0003 21.3 0.0 0.086 13.4 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase SE PF08491.10 CTQ29799.1 - 0.0018 17.3 0.0 0.0026 16.9 0.0 1.2 1 0 0 1 1 1 1 Squalene epoxidase NAD_binding_9 PF13454.6 CTQ29799.1 - 0.008 16.2 0.2 0.3 11.1 0.1 2.5 2 0 0 2 2 2 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 CTQ29799.1 - 0.012 15.8 0.6 0.041 14.1 0.1 2.2 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Erythro-docking PF09277.11 CTQ29799.1 - 0.1 12.5 0.1 8.4 6.4 0.1 2.6 2 0 0 2 2 2 0 Erythronolide synthase, docking Peptidase_M24 PF00557.24 CTQ29800.1 - 1.7e-65 220.6 0.1 2.3e-65 220.2 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 AMP_N PF05195.16 CTQ29800.1 - 3.4e-35 120.5 0.0 7.2e-35 119.4 0.0 1.6 1 0 0 1 1 1 1 Aminopeptidase P, N-terminal domain UPF0149 PF03695.13 CTQ29801.1 - 1.9e-39 135.7 1.1 2.1e-39 135.6 1.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0149) ZapA PF05164.13 CTQ29802.1 - 7.8e-20 71.1 1.6 9.7e-20 70.8 1.6 1.1 1 0 0 1 1 1 1 Cell division protein ZapA DUF3482 PF11981.8 CTQ29802.1 - 0.00078 18.9 3.8 0.00098 18.6 3.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) PriC PF07445.12 CTQ29802.1 - 0.012 15.5 4.5 0.016 15.2 4.5 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC PEP-utilisers_N PF05524.13 CTQ29802.1 - 0.03 14.5 2.8 0.048 13.8 2.8 1.3 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal Flu_NS2 PF00601.19 CTQ29802.1 - 0.037 14.3 0.3 0.066 13.5 0.1 1.5 1 1 0 1 1 1 0 Influenza non-structural protein (NS2) Fib_alpha PF08702.10 CTQ29802.1 - 0.077 13.2 1.8 0.11 12.7 1.8 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family YtxH PF12732.7 CTQ29802.1 - 0.093 13.3 0.3 0.14 12.7 0.3 1.3 1 1 0 1 1 1 0 YtxH-like protein DUF2205 PF10224.9 CTQ29802.1 - 0.21 11.6 4.3 0.88 9.6 0.3 2.1 2 0 0 2 2 2 0 Short coiled-coil protein WXG100 PF06013.12 CTQ29802.1 - 0.24 11.7 5.0 5.9 7.2 0.8 2.1 2 0 0 2 2 2 0 Proteins of 100 residues with WXG DUF5320 PF17253.2 CTQ29802.1 - 1.2 10.3 5.3 10 7.3 0.6 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5320) 5-FTHF_cyc-lig PF01812.20 CTQ29803.1 - 4.3e-45 153.9 0.0 4.8e-45 153.7 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family 2-Hacid_dh_C PF02826.19 CTQ29804.1 - 2.9e-52 176.6 0.0 4.7e-52 175.9 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 CTQ29804.1 - 7.4e-37 126.0 0.0 1.2e-36 125.4 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 CTQ29804.1 - 8.2e-07 28.7 0.0 2.1e-06 27.4 0.0 1.7 1 0 0 1 1 1 1 ACT domain NAD_binding_2 PF03446.15 CTQ29804.1 - 2.1e-05 24.7 1.1 0.00015 21.9 0.1 2.4 3 0 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 CTQ29804.1 - 0.022 14.6 0.1 0.89 9.4 0.0 2.5 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACT_4 PF13291.6 CTQ29804.1 - 0.041 14.5 0.0 0.098 13.3 0.0 1.6 1 0 0 1 1 1 0 ACT domain Ldh_1_N PF00056.23 CTQ29804.1 - 0.049 13.7 0.2 0.13 12.3 0.1 1.8 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain Rib_5-P_isom_A PF06026.14 CTQ29805.1 - 2.7e-58 196.4 0.5 3.2e-58 196.1 0.5 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 CTQ29805.1 - 0.00011 22.1 0.1 0.0012 18.7 0.0 2.3 1 1 0 2 2 2 1 DeoR C terminal sensor domain HTH_1 PF00126.27 CTQ29806.1 - 7.3e-19 67.5 1.5 1.1e-18 66.9 0.1 2.1 3 0 0 3 3 3 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 CTQ29806.1 - 1.3e-13 50.8 1.6 2e-13 50.2 1.6 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 CTQ29806.1 - 0.035 13.9 0.0 0.079 12.8 0.0 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain SIMPL PF04402.14 CTQ29807.1 - 5e-45 154.4 6.6 6.1e-45 154.1 6.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) DUF1611_N PF17396.2 CTQ29807.1 - 0.011 15.9 0.0 0.13 12.5 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_N) Rossmann-like domain LysE PF01810.18 CTQ29808.1 - 7.8e-55 185.3 17.8 8.8e-55 185.2 17.8 1.0 1 0 0 1 1 1 1 LysE type translocator TMEM208_SND2 PF05620.11 CTQ29808.1 - 5.1 6.9 6.9 1.1 9.0 0.8 2.2 2 0 0 2 2 2 0 SRP-independent targeting protein 2/TMEM208 MS_channel PF00924.18 CTQ29809.1 - 5.7e-58 195.9 1.7 5.7e-58 195.9 1.7 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel TM_helix PF05552.12 CTQ29809.1 - 5.6e-15 55.1 3.3 5.6e-15 55.1 3.3 2.3 2 0 0 2 2 2 1 Conserved TM helix F_bP_aldolase PF01116.20 CTQ29810.1 - 1.3e-89 300.4 0.1 1.6e-89 300.2 0.1 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II MR_MLE_C PF13378.6 CTQ29810.1 - 0.14 11.7 0.1 0.22 11.0 0.1 1.4 1 0 0 1 1 1 0 Enolase C-terminal domain-like PGK PF00162.19 CTQ29811.1 - 1.3e-138 462.0 0.5 1.5e-138 461.9 0.5 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase TFIIE_beta PF02186.15 CTQ29811.1 - 0.12 12.6 0.0 4.4 7.7 0.0 2.5 2 0 0 2 2 2 0 TFIIE beta subunit core domain Gp_dh_C PF02800.20 CTQ29812.1 - 1.6e-55 187.0 0.3 2.2e-55 186.6 0.3 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 CTQ29812.1 - 1.7e-33 115.0 0.1 1e-32 112.5 0.0 2.1 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 CTQ29812.1 - 0.00024 21.8 0.1 0.00087 19.9 0.1 1.9 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.20 CTQ29812.1 - 0.012 15.7 0.6 0.12 12.5 0.1 2.7 2 1 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 CTQ29812.1 - 0.022 15.6 0.5 0.068 14.0 0.1 2.2 2 2 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold TrkA_N PF02254.18 CTQ29812.1 - 0.023 15.0 0.1 0.049 13.9 0.1 1.6 1 0 0 1 1 1 0 TrkA-N domain Asp23 PF03780.13 CTQ29812.1 - 0.12 12.8 0.1 0.35 11.3 0.0 1.8 2 0 0 2 2 2 0 Asp23 family, cell envelope-related function HTH_1 PF00126.27 CTQ29813.1 - 2e-20 72.5 1.6 3.8e-20 71.6 1.6 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 CTQ29813.1 - 9.1e-13 48.0 0.0 3.6e-12 46.1 0.0 1.8 1 1 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 CTQ29813.1 - 0.061 13.1 1.5 0.13 12.1 1.5 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DUF413 PF04219.12 CTQ29814.1 - 1.7e-40 136.9 0.1 2e-40 136.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF Mg_chelatase PF01078.21 CTQ29815.1 - 1.1e-90 302.6 0.0 2.2e-90 301.6 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI ChlI PF13541.6 CTQ29815.1 - 3.6e-44 149.5 0.0 6.3e-44 148.7 0.0 1.4 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase Mg_chelatase_C PF13335.6 CTQ29815.1 - 3.4e-29 101.3 6.8 7.4e-29 100.2 6.8 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI C-terminal AAA_5 PF07728.14 CTQ29815.1 - 1.9e-13 50.6 0.0 2.2e-12 47.1 0.0 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) MCM PF00493.23 CTQ29815.1 - 6e-12 45.1 0.0 1.7e-09 37.1 0.0 2.2 2 0 0 2 2 2 2 MCM P-loop domain Sigma54_activat PF00158.26 CTQ29815.1 - 6.6e-06 25.9 0.0 9.3e-05 22.2 0.0 2.4 2 1 0 2 2 2 1 Sigma-54 interaction domain AAA_32 PF13654.6 CTQ29815.1 - 0.00035 19.5 0.1 0.018 13.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 CTQ29815.1 - 0.00043 20.7 0.3 0.0022 18.4 0.3 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CTQ29815.1 - 0.0011 19.3 2.2 0.0019 18.6 0.2 2.5 2 1 0 2 2 2 1 AAA ATPase domain AAA_33 PF13671.6 CTQ29815.1 - 0.0015 18.7 1.3 0.11 12.6 0.0 2.6 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 CTQ29815.1 - 0.0018 18.0 0.3 0.17 11.7 0.0 2.9 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 CTQ29815.1 - 0.0031 17.8 0.2 0.01 16.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 CTQ29815.1 - 0.0048 16.5 0.7 0.18 11.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain Sigma54_activ_2 PF14532.6 CTQ29815.1 - 0.008 16.3 0.0 0.24 11.5 0.0 2.5 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_7 PF12775.7 CTQ29815.1 - 0.013 15.0 0.0 0.048 13.2 0.0 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region IstB_IS21 PF01695.17 CTQ29815.1 - 0.019 14.7 0.1 0.051 13.3 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein ABC_tran PF00005.27 CTQ29815.1 - 0.019 15.5 0.1 0.26 11.8 0.0 2.3 2 0 0 2 2 2 0 ABC transporter AAA_24 PF13479.6 CTQ29815.1 - 0.029 14.1 0.0 0.053 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 CTQ29815.1 - 0.066 13.5 0.2 0.23 11.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain TPP_enzyme_N PF02776.18 CTQ29816.1 - 3.9e-57 192.6 5.0 1.3e-56 190.9 0.2 3.4 3 1 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 CTQ29816.1 - 4.9e-51 172.5 0.3 2.7e-49 166.9 0.0 2.9 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 CTQ29816.1 - 3.2e-43 146.7 0.1 7.8e-43 145.5 0.1 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 CTQ29816.1 - 0.0027 17.5 0.3 0.0052 16.6 0.3 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg XFP_N PF09364.10 CTQ29816.1 - 0.15 10.8 0.1 0.33 9.7 0.1 1.6 1 1 0 1 1 1 0 XFP N-terminal domain ACT_5 PF13710.6 CTQ29817.1 - 4.5e-27 93.7 0.0 5.5e-27 93.4 0.0 1.1 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 CTQ29817.1 - 0.00057 20.4 0.0 0.00068 20.2 0.0 1.1 1 0 0 1 1 1 1 ACT domain Aminotran_4 PF01063.19 CTQ29818.1 - 5.9e-50 170.2 0.0 6.8e-50 170.0 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV ILVD_EDD PF00920.21 CTQ29819.1 - 1.7e-220 733.0 2.7 1.9e-220 732.9 2.7 1.0 1 0 0 1 1 1 1 Dehydratase family Ribosomal_S27 PF01599.19 CTQ29819.1 - 1.8 8.8 5.8 20 5.4 0.8 3.3 4 0 0 4 4 4 0 Ribosomal protein S27a PALP PF00291.25 CTQ29820.1 - 7.4e-79 265.2 2.1 1.1e-78 264.6 2.1 1.3 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Thr_dehydrat_C PF00585.18 CTQ29820.1 - 3e-59 196.8 0.0 2.4e-28 97.7 0.0 2.4 2 0 0 2 2 2 2 C-terminal regulatory domain of Threonine dehydratase LysR_substrate PF03466.20 CTQ29821.1 - 1.8e-37 128.8 0.5 2.9e-37 128.1 0.5 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29821.1 - 1e-21 76.6 0.4 1.9e-21 75.8 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ29821.1 - 0.00016 21.4 0.1 0.00033 20.4 0.1 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain MarR PF01047.22 CTQ29821.1 - 0.02 14.8 0.0 0.045 13.7 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_24 PF13412.6 CTQ29821.1 - 0.026 14.1 0.4 0.07 12.7 0.0 1.9 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ29821.1 - 0.052 13.4 0.1 0.13 12.2 0.1 1.7 1 0 0 1 1 1 0 MarR family HTH_23 PF13384.6 CTQ29821.1 - 0.058 13.2 0.0 0.53 10.2 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain SBP_bac_11 PF13531.6 CTQ29821.1 - 0.074 12.8 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein Mga PF05043.13 CTQ29821.1 - 0.082 13.5 0.0 1.2 9.7 0.0 2.2 2 0 0 2 2 2 0 Mga helix-turn-helix domain Fe_dep_repress PF01325.19 CTQ29821.1 - 0.12 12.6 0.0 0.28 11.4 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.7 CTQ29821.1 - 0.14 12.2 0.6 8.2 6.6 0.1 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain IlvN PF07991.12 CTQ29822.1 - 9.2e-59 197.7 0.2 1.5e-58 197.0 0.2 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 CTQ29822.1 - 1.7e-53 180.8 1.0 4.6e-28 98.3 0.0 2.3 2 0 0 2 2 2 2 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 CTQ29822.1 - 0.00029 20.3 0.0 0.00057 19.3 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 CTQ29822.1 - 0.006 17.0 0.1 0.019 15.4 0.0 1.9 2 0 0 2 2 2 1 Putative NAD(P)-binding AdoHcyase_NAD PF00670.21 CTQ29822.1 - 0.019 15.1 0.0 0.04 14.0 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F420_oxidored PF03807.17 CTQ29822.1 - 0.039 14.5 0.1 0.93 10.1 0.0 2.9 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 CTQ29822.1 - 0.039 13.6 0.0 0.071 12.8 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Rotamase_3 PF13616.6 CTQ29824.1 - 1.7e-20 73.7 0.0 1.9e-20 73.5 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.21 CTQ29824.1 - 3.4e-20 72.8 0.0 4.8e-20 72.3 0.0 1.2 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 CTQ29824.1 - 4e-05 24.4 0.0 4.5e-05 24.3 0.0 1.0 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 CTQ29825.1 - 1.4e-20 74.0 0.0 1.7e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.21 CTQ29825.1 - 1.1e-16 61.6 0.0 1.5e-16 61.1 0.0 1.2 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 CTQ29825.1 - 0.039 14.8 0.0 0.045 14.6 0.0 1.1 1 0 0 1 1 1 0 PPIC-type PPIASE domain UvrD-helicase PF00580.21 CTQ29826.1 - 2.3e-74 250.8 0.4 5e-73 246.4 0.4 2.3 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 CTQ29826.1 - 1.3e-72 245.1 0.1 8.8e-72 242.4 0.1 2.0 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 CTQ29826.1 - 2.6e-36 125.1 0.1 4.8e-36 124.3 0.1 1.5 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 CTQ29826.1 - 1.9e-10 40.4 0.0 1.7e-09 37.4 0.0 2.5 2 1 0 2 2 2 1 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 CTQ29826.1 - 8.5e-10 38.7 0.4 2.4e-05 24.1 0.2 2.4 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 CTQ29826.1 - 1.9e-06 27.8 0.5 0.015 15.0 0.0 3.5 3 1 0 3 3 3 2 Viral (Superfamily 1) RNA helicase Exonuc_V_gamma PF04257.14 CTQ29826.1 - 0.00081 17.7 0.1 0.0029 15.9 0.0 1.9 2 0 0 2 2 2 1 Exodeoxyribonuclease V, gamma subunit PhoH PF02562.16 CTQ29826.1 - 0.1 12.0 0.1 0.78 9.2 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein RESP18 PF14948.6 CTQ29826.1 - 0.13 12.6 0.1 0.38 11.1 0.1 1.7 1 0 0 1 1 1 0 RESP18 domain DUF554 PF04474.12 CTQ29827.1 - 8.4e-63 211.8 18.3 9.6e-63 211.6 18.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF554) Amidohydro_2 PF04909.14 CTQ29828.1 - 4.7e-38 131.6 0.1 6e-38 131.3 0.1 1.1 1 0 0 1 1 1 1 Amidohydrolase SAICAR_synt PF01259.18 CTQ29828.1 - 0.029 14.0 0.0 0.044 13.4 0.0 1.3 1 0 0 1 1 1 0 SAICAR synthetase DUF1778 PF08681.11 CTQ29828.1 - 0.047 13.6 1.1 7.4 6.6 0.0 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1778) LysR_substrate PF03466.20 CTQ29829.1 - 4.3e-22 78.5 3.1 6.5e-22 77.9 3.1 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29829.1 - 3.1e-14 52.7 0.0 6e-14 51.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Ppx-GppA PF02541.16 CTQ29830.1 - 3e-100 335.4 1.1 4.1e-100 334.9 1.1 1.2 1 0 0 1 1 1 1 Ppx/GppA phosphatase family DEAD PF00270.29 CTQ29831.1 - 4.7e-46 156.7 0.0 7.8e-45 152.8 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CTQ29831.1 - 8.7e-30 103.3 0.0 1.3e-28 99.5 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CTQ29831.1 - 1.1e-05 25.5 0.0 1.9e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 CTQ29831.1 - 0.0057 15.9 0.0 0.0083 15.4 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 CTQ29831.1 - 0.02 15.2 0.0 0.067 13.5 0.0 1.9 1 1 0 1 1 1 0 AAA domain Thioredoxin PF00085.20 CTQ29832.1 - 6.3e-34 116.1 0.0 7e-34 115.9 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 CTQ29832.1 - 8.6e-08 32.6 0.1 7e-07 29.7 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 CTQ29832.1 - 5e-07 30.0 0.0 3.5e-05 24.0 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_9 PF14595.6 CTQ29832.1 - 7.8e-05 22.5 0.0 8.2e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin TraF PF13728.6 CTQ29832.1 - 8.4e-05 22.5 0.0 0.0001 22.2 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_3 PF13192.6 CTQ29832.1 - 0.0022 18.0 0.0 0.0029 17.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain AhpC-TSA PF00578.21 CTQ29832.1 - 0.0057 16.6 0.0 0.012 15.5 0.0 1.5 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_6 PF13848.6 CTQ29832.1 - 0.0088 16.0 0.0 0.018 15.0 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain Redoxin PF08534.10 CTQ29832.1 - 0.0089 15.7 0.0 0.028 14.1 0.0 1.7 1 1 1 2 2 2 1 Redoxin OST3_OST6 PF04756.13 CTQ29832.1 - 0.011 15.2 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family DSBA PF01323.20 CTQ29832.1 - 0.065 13.0 0.0 1.5 8.6 0.0 2.0 1 1 1 2 2 2 0 DSBA-like thioredoxin domain DUF836 PF05768.14 CTQ29832.1 - 0.07 13.6 0.0 0.1 13.0 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Thioredoxin_7 PF13899.6 CTQ29832.1 - 0.084 13.1 0.0 0.15 12.3 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin-like HyaE PF07449.11 CTQ29832.1 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Rho_RNA_bind PF07497.12 CTQ29833.1 - 1.5e-32 111.3 0.0 3.1e-32 110.2 0.0 1.6 1 0 0 1 1 1 1 Rho termination factor, RNA-binding domain ATP-synt_ab PF00006.25 CTQ29833.1 - 7.8e-23 81.2 0.0 1.1e-22 80.7 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain Rho_N PF07498.12 CTQ29833.1 - 2e-17 62.8 0.5 2.1e-16 59.6 0.2 2.5 2 0 0 2 2 2 1 Rho termination factor, N-terminal domain NACHT PF05729.12 CTQ29833.1 - 6e-05 23.0 0.0 0.00011 22.2 0.0 1.3 1 0 0 1 1 1 1 NACHT domain OB_RNB PF08206.11 CTQ29833.1 - 0.002 17.8 0.0 0.0046 16.6 0.0 1.6 1 0 0 1 1 1 1 Ribonuclease B OB domain AAA_25 PF13481.6 CTQ29833.1 - 0.0025 17.4 0.1 0.0097 15.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 CTQ29833.1 - 0.0036 17.7 0.0 0.0076 16.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CTQ29833.1 - 0.0085 16.4 0.0 0.023 15.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain Terminase_GpA PF05876.12 CTQ29833.1 - 0.086 11.4 0.0 6.7 5.1 0.0 2.1 2 0 0 2 2 2 0 Phage terminase large subunit (GpA) FtsK_SpoIIIE PF01580.18 CTQ29833.1 - 0.097 12.0 0.0 0.2 11.0 0.0 1.4 1 1 0 1 1 1 0 FtsK/SpoIIIE family DnaB_C PF03796.15 CTQ29833.1 - 0.12 11.7 0.0 0.22 10.8 0.0 1.5 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain DUF1912 PF08930.10 CTQ29833.1 - 0.14 12.4 0.1 27 5.0 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1912) Glycos_transf_4 PF00953.21 CTQ29834.1 - 8.4e-30 103.9 20.5 8.4e-30 103.9 20.5 2.5 3 0 0 3 3 3 1 Glycosyl transferase family 4 TMEM100 PF16311.5 CTQ29834.1 - 0.0067 16.0 2.6 0.033 13.8 0.2 2.6 2 0 0 2 2 2 1 Transmembrane protein 100 MgtC PF02308.16 CTQ29834.1 - 0.069 13.5 0.5 0.069 13.5 0.5 3.5 3 1 0 3 3 3 0 MgtC family Cu PF17563.2 CTQ29834.1 - 0.16 12.2 0.2 0.36 11.1 0.2 1.5 1 0 0 1 1 1 0 Cupiennin Wzz PF02706.15 CTQ29835.1 - 3.8e-12 46.3 1.5 4.9e-12 46.0 0.0 2.0 2 0 0 2 2 2 1 Chain length determinant protein RGS PF00615.19 CTQ29835.1 - 0.049 13.9 0.3 0.098 12.9 0.3 1.5 1 0 0 1 1 1 0 Regulator of G protein signaling domain GNVR PF13807.6 CTQ29835.1 - 0.084 12.8 0.4 0.24 11.4 0.0 2.0 2 0 0 2 2 2 0 G-rich domain on putative tyrosine kinase Epimerase_2 PF02350.19 CTQ29836.1 - 3.4e-127 424.1 0.0 3.8e-127 423.9 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_4 PF13579.6 CTQ29836.1 - 0.00041 20.8 0.0 0.001 19.6 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 CTQ29836.1 - 0.00085 19.4 0.0 0.0021 18.1 0.0 1.7 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 CTQ29836.1 - 0.055 13.5 0.0 0.094 12.7 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like Glycos_transf_1 PF00534.20 CTQ29836.1 - 0.15 11.6 0.0 0.37 10.3 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 UDPG_MGDP_dh_N PF03721.14 CTQ29837.1 - 3.3e-59 199.6 0.1 9.2e-58 194.9 0.1 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 CTQ29837.1 - 2.6e-27 94.9 0.0 5.2e-27 93.9 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 CTQ29837.1 - 9.8e-19 67.7 0.0 2.6e-18 66.4 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 CTQ29837.1 - 5.1e-07 30.0 0.1 4.3e-06 27.0 0.1 2.4 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 CTQ29837.1 - 0.0034 17.3 0.0 0.0076 16.2 0.0 1.7 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 CTQ29837.1 - 0.004 17.4 1.2 0.022 15.0 0.2 2.5 2 0 0 2 2 2 1 TrkA-N domain ApbA PF02558.16 CTQ29837.1 - 0.014 15.1 0.6 0.11 12.2 0.1 2.7 4 1 0 4 4 4 0 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 CTQ29837.1 - 0.022 14.1 0.1 0.35 10.2 0.0 2.2 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 CTQ29837.1 - 0.03 14.3 0.1 4.9 7.1 0.0 2.8 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CIF PF16374.5 CTQ29837.1 - 0.067 13.3 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Cycle inhibiting factor (CIF) Methyltransf_4 PF02390.17 CTQ29837.1 - 0.086 12.3 0.0 0.22 11.0 0.0 1.7 1 0 0 1 1 1 0 Putative methyltransferase Pyr_redox_2 PF07992.14 CTQ29837.1 - 0.14 11.4 0.1 0.23 10.7 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GDP_Man_Dehyd PF16363.5 CTQ29838.1 - 2.5e-98 329.5 0.0 2.9e-98 329.3 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 CTQ29838.1 - 5.9e-75 251.8 0.0 7.1e-75 251.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 CTQ29838.1 - 1.3e-17 63.9 0.0 1.9e-17 63.4 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 CTQ29838.1 - 1.1e-14 54.1 0.0 1.8e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 CTQ29838.1 - 4.9e-14 52.1 0.0 1.4e-13 50.7 0.0 1.5 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 CTQ29838.1 - 2e-12 46.8 0.0 2.1e-08 33.7 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein Sacchrp_dh_NADP PF03435.18 CTQ29838.1 - 2.4e-06 27.8 0.1 3.9e-06 27.1 0.1 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain adh_short PF00106.25 CTQ29838.1 - 4.7e-06 26.2 0.3 0.0018 17.8 0.1 2.3 2 0 0 2 2 2 2 short chain dehydrogenase KR PF08659.10 CTQ29838.1 - 1.4e-05 25.1 0.1 0.00011 22.2 0.1 2.1 2 0 0 2 2 2 1 KR domain MarR_2 PF12802.7 CTQ29838.1 - 0.024 14.5 0.2 1.5 8.8 0.0 2.9 3 0 0 3 3 3 0 MarR family NTP_transferase PF00483.23 CTQ29839.1 - 1.4e-69 234.5 0.0 1.6e-69 234.2 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 CTQ29839.1 - 1.6e-10 41.6 0.0 2.2e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 CTQ29839.1 - 0.00084 19.1 0.0 0.0012 18.6 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Acetyltransf_1 PF00583.25 CTQ29840.1 - 0.0028 17.9 0.2 0.0051 17.0 0.2 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family DegT_DnrJ_EryC1 PF01041.17 CTQ29841.1 - 6.9e-85 285.5 0.0 8.3e-85 285.2 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 CTQ29841.1 - 2.3e-09 36.9 0.1 4.9e-09 35.8 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 CTQ29841.1 - 6.4e-06 25.4 0.0 9.8e-06 24.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V OKR_DC_1 PF01276.20 CTQ29841.1 - 0.00014 20.7 0.0 0.00034 19.5 0.0 1.6 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Beta_elim_lyase PF01212.21 CTQ29841.1 - 0.00042 19.7 0.1 0.00082 18.7 0.1 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 CTQ29841.1 - 0.013 14.1 0.1 0.02 13.4 0.1 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme GCD14 PF08704.10 CTQ29841.1 - 0.15 11.7 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Polysacc_synt PF01943.17 CTQ29842.1 - 4.3e-11 42.7 16.1 4.3e-11 42.7 16.1 1.6 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 CTQ29842.1 - 1.7e-08 34.1 7.4 3e-08 33.3 7.4 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Glyco_transf_56 PF07429.11 CTQ29843.1 - 1.9e-181 602.9 0.0 2.2e-181 602.7 0.0 1.0 1 0 0 1 1 1 1 4-alpha-L-fucosyltransferase glycosyl transferase group 56 WzyE PF06899.11 CTQ29844.1 - 4.9e-252 836.6 46.4 5.5e-252 836.4 46.4 1.0 1 0 0 1 1 1 1 WzyE protein, O-antigen assembly polymerase Glyco_tran_WecB PF03808.13 CTQ29845.1 - 5.2e-52 176.2 0.2 6.6e-52 175.9 0.2 1.1 1 0 0 1 1 1 1 Glycosyl transferase WecB/TagA/CpsF family AA_permease PF00324.21 CTQ29846.1 - 1.7e-101 340.2 53.7 2.1e-101 339.9 53.7 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ29846.1 - 2.7e-39 135.2 55.5 3.7e-39 134.8 55.5 1.1 1 0 0 1 1 1 1 Amino acid permease HemY_N PF07219.13 CTQ29848.1 - 2.8e-36 124.0 2.7 2.8e-36 124.0 2.7 3.4 3 1 1 4 4 4 1 HemY protein N-terminus TPR_2 PF07719.17 CTQ29848.1 - 2.5e-07 30.3 14.9 1.8e-05 24.5 0.0 5.1 5 2 2 7 7 7 2 Tetratricopeptide repeat TPR_19 PF14559.6 CTQ29848.1 - 0.00027 21.4 18.5 1.1 9.9 0.6 5.1 3 2 2 5 5 5 4 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ29848.1 - 0.00082 20.0 30.8 0.0039 17.9 0.5 6.8 5 2 3 8 8 7 2 Tetratricopeptide repeat TPR_1 PF00515.28 CTQ29848.1 - 0.0041 16.9 1.2 0.054 13.3 0.0 3.4 4 0 0 4 4 4 1 Tetratricopeptide repeat MAS20 PF02064.15 CTQ29848.1 - 0.012 15.7 0.3 1.4 9.0 0.0 3.1 2 1 1 3 3 3 0 MAS20 protein import receptor TPR_8 PF13181.6 CTQ29848.1 - 0.015 15.5 0.2 15 6.1 0.1 3.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 CTQ29848.1 - 0.025 15.2 3.4 0.025 15.2 3.4 4.8 4 2 1 5 5 5 0 Tetratricopeptide repeat TPR_9 PF13371.6 CTQ29848.1 - 0.06 13.5 13.2 0.43 10.8 0.3 3.9 2 2 1 3 3 3 0 Tetratricopeptide repeat DUF4834 PF16118.5 CTQ29848.1 - 0.23 12.4 0.0 0.23 12.4 0.0 1.8 2 0 0 2 2 1 0 Domain of unknown function (DUF4834) Claudin_3 PF06653.11 CTQ29848.1 - 0.45 10.4 2.8 0.69 9.8 2.8 1.2 1 0 0 1 1 1 0 Tight junction protein, Claudin-like TPR_6 PF13174.6 CTQ29848.1 - 1.2 10.0 9.8 2.2 9.1 0.0 4.1 5 0 0 5 5 4 0 Tetratricopeptide repeat TPR_12 PF13424.6 CTQ29848.1 - 1.5 9.1 15.4 4.4 7.7 0.6 3.8 4 2 0 4 4 3 0 Tetratricopeptide repeat OppC_N PF12911.7 CTQ29848.1 - 2.3 8.2 8.2 9.2 6.3 2.0 2.8 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C HemX PF04375.14 CTQ29849.1 - 1.7e-129 432.0 30.5 2.3e-129 431.5 30.5 1.1 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase Tweety PF04906.13 CTQ29849.1 - 2.6e-05 23.1 0.8 4.6e-05 22.3 0.8 1.3 1 0 0 1 1 1 1 Tweety DUF1043 PF06295.12 CTQ29849.1 - 0.004 17.2 3.7 0.016 15.2 3.7 2.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1043) ETRAMP PF09716.10 CTQ29849.1 - 0.0071 16.4 2.5 0.011 15.8 0.2 2.2 2 0 0 2 2 2 1 Malarial early transcribed membrane protein (ETRAMP) DUF4446 PF14584.6 CTQ29849.1 - 0.011 15.7 1.2 0.032 14.2 1.2 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) Tropomyosin PF00261.20 CTQ29849.1 - 0.021 14.2 7.2 0.042 13.2 7.2 1.4 1 0 0 1 1 1 0 Tropomyosin PrgH PF09480.10 CTQ29849.1 - 0.028 13.8 4.3 2 7.6 4.3 2.2 1 1 0 1 1 1 0 Type III secretion system protein PrgH-EprH (PrgH) PHD_3 PF13922.6 CTQ29849.1 - 0.08 13.3 0.5 0.34 11.3 0.5 2.1 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx Cortex-I_coil PF09304.10 CTQ29849.1 - 0.11 12.7 10.8 0.66 10.2 9.1 2.8 2 1 0 2 2 1 0 Cortexillin I, coiled coil DUF1664 PF07889.12 CTQ29849.1 - 0.2 11.7 7.7 0.047 13.7 2.2 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) V_ATPase_I PF01496.19 CTQ29849.1 - 0.2 9.6 2.4 0.42 8.5 2.4 1.5 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Ppx-GppA PF02541.16 CTQ29849.1 - 0.43 10.0 4.4 0.95 8.8 4.4 1.6 1 0 0 1 1 1 0 Ppx/GppA phosphatase family TMPIT PF07851.13 CTQ29849.1 - 0.81 8.9 3.7 1.7 7.8 3.7 1.4 1 0 0 1 1 1 0 TMPIT-like protein FlaC_arch PF05377.11 CTQ29849.1 - 0.89 10.0 4.5 0.88 10.0 1.3 2.7 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) KELK PF15796.5 CTQ29849.1 - 0.96 10.0 9.1 0.58 10.7 6.2 2.3 2 0 0 2 2 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF4795 PF16043.5 CTQ29849.1 - 1.6 8.3 11.1 0.39 10.3 3.3 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4795) VIT1 PF01988.19 CTQ29849.1 - 1.8 8.4 5.8 0.92 9.3 2.9 2.0 2 0 0 2 2 2 0 VIT family Allexi_40kDa PF05549.11 CTQ29849.1 - 3.1 7.3 6.9 1.9 7.9 2.5 2.4 3 0 0 3 3 3 0 Allexivirus 40kDa protein ApoO PF09769.9 CTQ29849.1 - 3.1 7.7 6.9 11 6.0 2.7 3.0 3 0 0 3 3 3 0 Apolipoprotein O DUF948 PF06103.11 CTQ29849.1 - 3.2 8.1 8.9 0.59 10.4 3.0 2.8 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) HEM4 PF02602.15 CTQ29850.1 - 6.3e-39 133.7 0.0 7e-39 133.5 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Oxidored_nitro PF00148.19 CTQ29850.1 - 0.2 10.3 0.0 0.24 10.1 0.0 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Porphobil_deam PF01379.20 CTQ29851.1 - 3e-82 275.1 0.0 3.8e-82 274.7 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 CTQ29851.1 - 5.7e-24 84.3 0.1 1.1e-23 83.4 0.1 1.5 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain Adenylate_cycl PF01295.18 CTQ29852.1 - 4e-253 841.5 0.0 4.8e-253 841.2 0.0 1.0 1 0 0 1 1 1 1 Adenylate cyclase, class-I Adenyl_cycl_N PF12633.7 CTQ29852.1 - 4.1e-84 281.5 0.0 1.8e-80 269.6 0.0 2.3 2 0 0 2 2 2 2 Adenylate cyclase NT domain Frataxin_Cyay PF01491.16 CTQ29853.1 - 1.5e-30 105.4 0.1 1.7e-30 105.3 0.1 1.0 1 0 0 1 1 1 1 Frataxin-like domain LPAM_2 PF13627.6 CTQ29854.1 - 1.8e-09 37.2 3.9 2.4e-09 36.8 3.9 1.2 1 0 0 1 1 1 1 Prokaryotic lipoprotein-attachment site DAP_epimerase PF01678.19 CTQ29855.1 - 2.6e-70 234.2 0.4 1e-34 119.3 0.0 2.0 2 0 0 2 2 2 2 Diaminopimelate epimerase PhzC-PhzF PF02567.16 CTQ29855.1 - 0.00014 21.5 0.0 0.00018 21.1 0.0 1.1 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein DUF4968 PF16338.5 CTQ29855.1 - 0.067 13.5 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4968) DUF484 PF04340.12 CTQ29856.1 - 5.7e-78 261.7 0.5 6.7e-78 261.5 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF484 Phage_integrase PF00589.22 CTQ29857.1 - 9.3e-53 178.5 0.0 1.3e-52 178.1 0.0 1.2 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 CTQ29857.1 - 6.4e-23 80.9 0.1 1.5e-22 79.7 0.1 1.6 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 CTQ29857.1 - 0.00033 21.1 0.0 0.0008 19.8 0.0 1.7 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain DUF3435 PF11917.8 CTQ29857.1 - 0.17 10.8 0.1 0.23 10.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) HAD_2 PF13419.6 CTQ29858.1 - 1.6e-14 54.4 0.0 3.8e-14 53.2 0.0 1.6 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ29858.1 - 3e-11 44.0 0.0 4.4e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ29858.1 - 2.7e-10 40.1 0.0 7e-10 38.8 0.0 1.7 1 0 0 1 1 1 1 HAD-hyrolase-like PGP_phosphatase PF09419.10 CTQ29858.1 - 0.17 11.5 0.1 5.4 6.6 0.0 2.8 3 1 0 3 3 3 0 Mitochondrial PGP phosphatase UvrD-helicase PF00580.21 CTQ29859.1 - 1.8e-76 257.7 0.0 5.2e-76 256.2 0.0 1.8 2 0 0 2 2 2 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 CTQ29859.1 - 4.9e-76 256.4 0.0 1.7e-75 254.6 0.0 1.8 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 CTQ29859.1 - 1.2e-32 113.2 0.0 5.7e-32 111.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 CTQ29859.1 - 1.4e-10 41.2 0.0 5.7e-05 22.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain UvrD_C_2 PF13538.6 CTQ29859.1 - 5.4e-10 38.9 0.0 1.2e-09 37.8 0.0 1.7 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 CTQ29859.1 - 0.0024 17.7 0.0 1.1 9.0 0.0 3.2 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase SpoIIAA-like PF11964.8 CTQ29859.1 - 0.024 15.7 0.0 0.23 12.6 0.0 2.7 3 0 0 3 3 3 0 SpoIIAA-like DUF3553 PF12073.8 CTQ29859.1 - 0.031 14.0 0.1 0.063 13.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3553) PhoH PF02562.16 CTQ29859.1 - 0.036 13.5 0.1 1.9 7.9 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein CorA PF01544.18 CTQ29860.1 - 4.4e-57 193.6 0.5 5.1e-57 193.4 0.5 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein TPR_14 PF13428.6 CTQ29860.1 - 0.12 13.2 0.3 2.5 9.2 0.1 3.0 1 1 1 2 2 2 0 Tetratricopeptide repeat EamA PF00892.20 CTQ29861.1 - 1.3e-20 73.9 35.6 6.1e-16 58.8 14.5 2.1 2 0 0 2 2 2 2 EamA-like transporter family ALMT PF11744.8 CTQ29861.1 - 0.0029 16.5 0.2 0.0045 15.9 0.2 1.2 1 0 0 1 1 1 1 Aluminium activated malate transporter FixS PF03597.15 CTQ29861.1 - 0.014 15.1 1.4 0.014 15.1 1.4 5.1 7 0 0 7 7 7 0 Cytochrome oxidase maturation protein cbb3-type Nuc_sug_transp PF04142.15 CTQ29861.1 - 0.079 12.1 3.4 0.076 12.2 1.8 1.8 1 1 1 2 2 2 0 Nucleotide-sugar transporter DUF2070 PF09843.9 CTQ29861.1 - 1 7.5 20.3 0.81 7.9 10.7 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) RseC_MucC PF04246.12 CTQ29861.1 - 5.2 7.0 12.5 1.4 8.8 1.3 3.5 2 2 1 3 3 3 0 Positive regulator of sigma(E), RseC/MucC 4HBT PF03061.22 CTQ29862.1 - 2.5e-18 66.2 0.3 3.6e-18 65.7 0.3 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 CTQ29862.1 - 2.9e-05 24.5 0.3 4.1e-05 24.0 0.3 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily DUF4442 PF14539.6 CTQ29862.1 - 0.023 14.9 0.1 0.16 12.1 0.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4442) GP52 PF17468.2 CTQ29862.1 - 0.05 13.8 0.2 0.15 12.2 0.0 1.9 2 0 0 2 2 2 0 Phage gene product 52 PLA1 PF02253.15 CTQ29863.1 - 5.3e-89 298.2 5.1 6.3e-89 298.0 5.1 1.0 1 0 0 1 1 1 1 Phospholipase A1 RQC PF09382.10 CTQ29864.1 - 1.2e-36 125.0 0.0 2.7e-36 123.8 0.0 1.6 1 0 0 1 1 1 1 RQC domain Helicase_C PF00271.31 CTQ29864.1 - 2.6e-25 88.9 0.0 9e-21 74.3 0.0 2.8 3 0 0 3 3 3 2 Helicase conserved C-terminal domain HRDC PF00570.23 CTQ29864.1 - 3.5e-23 81.4 0.0 7.2e-23 80.4 0.0 1.6 1 0 0 1 1 1 1 HRDC domain DEAD PF00270.29 CTQ29864.1 - 1.5e-21 76.9 0.0 5.9e-20 71.7 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase RecQ_Zn_bind PF16124.5 CTQ29864.1 - 2.9e-15 56.7 0.3 8.9e-15 55.2 0.1 2.1 2 0 0 2 2 2 1 RecQ zinc-binding LysE PF01810.18 CTQ29865.1 - 1.9e-54 184.1 13.4 2.2e-54 183.9 13.4 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 CTQ29865.1 - 3.2e-05 23.7 7.1 7.2e-05 22.5 7.1 1.8 1 1 0 1 1 1 1 Integral membrane protein TerC family DUF808 PF05661.12 CTQ29865.1 - 0.0058 15.7 1.6 0.0084 15.2 0.1 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF808) Nitrate_red_gam PF02665.14 CTQ29865.1 - 5.5 6.5 12.0 0.23 11.0 3.3 2.1 1 1 0 2 2 2 0 Nitrate reductase gamma subunit Transposase_31 PF04754.12 CTQ29866.1 - 2.9e-44 151.1 0.2 4e-44 150.7 0.2 1.2 1 0 0 1 1 1 1 Putative transposase, YhgA-like HTH_26 PF13443.6 CTQ29866.1 - 0.2 12.1 1.1 0.45 11.0 0.1 2.1 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain LysE PF01810.18 CTQ29868.1 - 6.5e-49 166.0 14.0 7.5e-49 165.8 14.0 1.0 1 0 0 1 1 1 1 LysE type translocator Hydrolase_4 PF12146.8 CTQ29869.1 - 2.2e-56 190.8 0.1 2.7e-56 190.5 0.1 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 CTQ29869.1 - 3.4e-26 92.4 0.0 5.4e-26 91.8 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 CTQ29869.1 - 3e-11 44.4 4.3 4.3e-11 43.9 4.3 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 CTQ29869.1 - 0.00092 18.8 0.0 0.0014 18.3 0.0 1.2 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase LCAT PF02450.15 CTQ29869.1 - 0.24 10.5 0.0 0.34 10.0 0.0 1.1 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase Porin_8 PF16966.5 CTQ29869.1 - 0.25 10.3 0.1 16 4.3 0.0 2.1 2 0 0 2 2 2 0 Porin-like glycoporin RafY Hydrolase_3 PF08282.12 CTQ29870.1 - 4e-65 220.1 0.0 4.5e-65 219.9 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 CTQ29870.1 - 1.6e-16 60.6 0.0 3.9e-08 33.1 0.0 2.1 1 1 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 CTQ29870.1 - 4.8e-10 40.1 0.1 3.3e-05 24.3 0.0 3.0 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 CTQ29870.1 - 0.00014 22.0 0.0 0.00093 19.3 0.0 2.2 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ29870.1 - 0.00036 21.0 1.9 0.03 14.7 0.0 3.2 3 1 1 4 4 4 1 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.16 CTQ29870.1 - 0.018 14.2 0.0 3.1 6.9 0.0 2.1 2 0 0 2 2 2 0 Trehalose-phosphatase EamA PF00892.20 CTQ29871.1 - 3.4e-20 72.6 36.8 7.5e-11 42.4 9.6 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF2070 PF09843.9 CTQ29871.1 - 7.8 4.7 16.7 7.5 4.7 16.1 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) LysR_substrate PF03466.20 CTQ29872.1 - 3.9e-44 150.5 3.9 5.7e-44 150.0 3.9 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29872.1 - 3.2e-16 59.0 1.2 7e-16 57.9 1.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ29872.1 - 0.043 13.6 0.3 0.1 12.4 0.3 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Meth_synt_2 PF01717.18 CTQ29873.1 - 1.4e-168 560.2 0.0 5.9e-161 535.1 0.0 2.7 3 0 0 3 3 3 2 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 CTQ29873.1 - 3.9e-134 447.1 0.0 3.7e-125 417.6 0.0 2.2 2 0 0 2 2 2 2 Cobalamin-independent synthase, N-terminal domain DLH PF01738.18 CTQ29874.1 - 2.7e-75 252.6 0.0 3.2e-75 252.4 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 CTQ29874.1 - 9e-07 28.6 0.0 0.00012 21.6 0.0 2.2 1 1 1 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 CTQ29874.1 - 9.5e-05 22.2 0.1 0.0036 17.0 0.0 2.3 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 CTQ29874.1 - 9.9e-05 22.2 0.0 0.00016 21.6 0.0 1.2 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 CTQ29874.1 - 0.00018 20.8 0.1 0.53 9.5 0.0 2.6 2 1 1 3 3 3 2 Serine aminopeptidase, S33 BAAT_C PF08840.11 CTQ29874.1 - 0.00025 21.0 0.2 0.27 11.1 0.4 2.9 1 1 1 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Esterase_phd PF10503.9 CTQ29874.1 - 0.016 14.7 0.1 0.057 12.9 0.0 1.9 2 0 0 2 2 2 0 Esterase PHB depolymerase Abhydrolase_5 PF12695.7 CTQ29874.1 - 0.079 12.7 0.0 0.29 10.9 0.0 1.9 1 1 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_6 PF12697.7 CTQ29874.1 - 0.13 12.8 5.3 0.92 10.1 5.0 2.1 1 1 0 1 1 1 0 Alpha/beta hydrolase family PNP_UDP_1 PF01048.20 CTQ29875.1 - 1.8e-39 135.4 1.7 2e-39 135.2 1.7 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily RmuC PF02646.16 CTQ29876.1 - 2.6e-106 355.0 1.3 2.6e-106 355.0 1.3 2.3 2 1 0 2 2 2 1 RmuC family DUF1043 PF06295.12 CTQ29876.1 - 0.0014 18.7 17.1 0.063 13.3 2.3 4.0 2 1 2 4 4 4 1 Protein of unknown function (DUF1043) DUF3456 PF11938.8 CTQ29876.1 - 0.0039 17.7 1.9 0.0095 16.5 1.9 1.7 1 0 0 1 1 1 1 TLR4 regulator and MIR-interacting MSAP DUF4047 PF13256.6 CTQ29876.1 - 0.029 14.6 1.1 0.15 12.3 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) LMP PF04778.12 CTQ29876.1 - 0.097 12.6 5.1 1.3 8.9 1.4 2.5 1 1 1 2 2 2 0 LMP repeated region Prefoldin_3 PF13758.6 CTQ29876.1 - 0.099 12.7 8.5 0.03 14.4 3.9 2.5 2 0 0 2 2 2 0 Prefoldin subunit CASP_C PF08172.12 CTQ29876.1 - 0.18 11.1 15.2 0.054 12.8 12.4 1.6 2 0 0 2 2 2 0 CASP C terminal SOGA PF11365.8 CTQ29876.1 - 0.69 11.1 14.1 4.9 8.4 0.0 4.0 2 1 3 5 5 5 0 Protein SOGA DUF842 PF05811.13 CTQ29876.1 - 0.75 9.5 3.9 0.26 11.0 0.3 2.1 3 0 0 3 3 3 0 Eukaryotic protein of unknown function (DUF842) Mer2 PF09074.10 CTQ29876.1 - 0.93 9.3 8.2 0.27 11.0 4.4 2.0 2 1 0 2 2 2 0 Mer2 DUF1664 PF07889.12 CTQ29876.1 - 1.7 8.7 7.0 2.3 8.3 1.4 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) LXG PF04740.12 CTQ29876.1 - 1.8 8.2 9.4 0.25 11.0 1.8 2.8 3 0 0 3 3 3 0 LXG domain of WXG superfamily Folliculin PF11704.8 CTQ29876.1 - 3.6 7.5 7.2 1.2 9.0 3.9 1.8 2 0 0 2 2 2 0 Vesicle coat protein involved in Golgi to plasma membrane transport Prefoldin_2 PF01920.20 CTQ29876.1 - 4.2 7.4 14.0 1.4 8.9 5.2 3.2 3 0 0 3 3 3 0 Prefoldin subunit Baculo_PEP_C PF04513.12 CTQ29876.1 - 6 6.9 12.9 0.98 9.5 3.8 3.2 3 1 1 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus GrpE PF01025.19 CTQ29876.1 - 7.3 6.2 13.0 13 5.4 9.8 2.7 2 1 0 2 2 2 0 GrpE Ubie_methyltran PF01209.18 CTQ29877.1 - 9.8e-111 368.7 0.1 1.1e-110 368.5 0.1 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 CTQ29877.1 - 1e-23 83.9 0.0 2e-23 82.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ29877.1 - 2.5e-22 79.4 0.0 4.9e-22 78.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ29877.1 - 6.6e-19 68.2 0.0 1.2e-18 67.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ29877.1 - 7.2e-16 58.5 0.0 9.8e-16 58.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ29877.1 - 5.1e-13 49.6 0.0 9.8e-13 48.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 CTQ29877.1 - 2.3e-06 27.5 0.0 3.6e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 CTQ29877.1 - 0.00014 21.6 0.0 0.00035 20.3 0.0 1.6 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 CTQ29877.1 - 0.0006 19.4 0.0 0.0011 18.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.15 CTQ29877.1 - 0.0024 17.8 0.1 0.0054 16.6 0.0 1.7 2 0 0 2 2 2 1 Hypothetical methyltransferase GCD14 PF08704.10 CTQ29877.1 - 0.014 15.1 0.0 0.094 12.4 0.0 1.8 1 1 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit Methyltr_RsmB-F PF01189.17 CTQ29877.1 - 0.014 15.0 0.0 0.049 13.3 0.0 1.7 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F MetW PF07021.12 CTQ29877.1 - 0.044 13.4 0.1 0.1 12.2 0.1 1.5 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW Rsm22 PF09243.10 CTQ29877.1 - 0.064 12.5 0.0 0.1 11.8 0.0 1.4 1 1 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 NNMT_PNMT_TEMT PF01234.17 CTQ29877.1 - 0.072 12.3 0.0 0.41 9.8 0.0 1.9 1 1 1 2 2 2 0 NNMT/PNMT/TEMT family SCP2 PF02036.17 CTQ29878.1 - 8.1e-20 71.2 0.1 1.2e-19 70.6 0.1 1.2 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 CTQ29878.1 - 0.05 13.9 0.0 0.07 13.4 0.0 1.2 1 0 0 1 1 1 0 Alkyl sulfatase C-terminal Sugarporin_N PF11471.8 CTQ29878.1 - 0.092 12.7 1.4 0.19 11.7 1.4 1.5 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension ABC1 PF03109.16 CTQ29879.1 - 5e-35 120.2 0.0 1.1e-34 119.1 0.0 1.6 1 0 0 1 1 1 1 ABC1 family APH PF01636.23 CTQ29879.1 - 0.092 12.6 0.3 0.55 10.1 0.3 2.4 1 1 0 1 1 1 0 Phosphotransferase enzyme family LPAM_1 PF08139.12 CTQ29879.1 - 0.22 12.1 0.2 0.51 10.9 0.2 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site MttA_Hcf106 PF02416.16 CTQ29880.1 - 4.9e-15 54.6 0.6 7.9e-15 53.9 0.6 1.5 1 1 0 1 1 1 1 mttA/Hcf106 family DUF2207 PF09972.9 CTQ29880.1 - 0.06 12.1 0.0 0.06 12.1 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FAM209 PF15206.6 CTQ29880.1 - 0.074 12.8 0.0 0.085 12.7 0.0 1.1 1 0 0 1 1 1 0 FAM209 family DUF4834 PF16118.5 CTQ29880.1 - 0.083 13.9 0.0 0.11 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF1980 PF09323.10 CTQ29880.1 - 0.087 12.7 0.1 0.1 12.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Conotoxin PF02950.17 CTQ29880.1 - 0.09 13.8 1.4 0.84 10.7 1.4 2.0 1 1 0 1 1 1 0 Conotoxin FH2 PF02181.23 CTQ29881.1 - 0.0028 16.8 1.0 0.0034 16.6 1.0 1.1 1 0 0 1 1 1 1 Formin Homology 2 Domain MttA_Hcf106 PF02416.16 CTQ29881.1 - 0.013 14.8 7.2 0.055 12.8 6.6 2.2 1 1 0 1 1 1 0 mttA/Hcf106 family Fas_alpha_ACP PF18325.1 CTQ29881.1 - 0.017 15.5 0.0 0.024 15.0 0.0 1.3 1 0 0 1 1 1 0 Fatty acid synthase subunit alpha Acyl carrier domain DUF1854 PF08909.11 CTQ29881.1 - 0.075 12.8 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1854) RapA_C PF12137.8 CTQ29881.1 - 0.092 11.8 4.2 0.056 12.5 2.6 1.4 1 1 0 1 1 1 0 RNA polymerase recycling family C-terminal CCDC53 PF10152.9 CTQ29881.1 - 0.57 10.6 9.7 0.79 10.1 9.7 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex ATP-synt_B PF00430.18 CTQ29881.1 - 2.2 8.4 8.1 3.1 7.9 1.1 2.2 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) TatC PF00902.18 CTQ29882.1 - 3.2e-65 219.8 23.0 4.3e-65 219.4 23.0 1.2 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) TatD_DNase PF01026.21 CTQ29883.1 - 8.2e-68 228.5 0.0 9.3e-68 228.3 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase NusG PF02357.19 CTQ29884.1 - 1.2e-18 67.3 0.0 1.8e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 Transcription termination factor nusG KOW PF00467.29 CTQ29884.1 - 0.11 12.5 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 KOW motif UbiD PF01977.16 CTQ29885.1 - 2.7e-173 576.5 0.0 3.1e-173 576.3 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NAD_binding_1 PF00175.21 CTQ29886.1 - 3e-21 76.1 0.0 5e-21 75.4 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 CTQ29886.1 - 2.5e-05 24.5 0.0 7.8e-05 23.0 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain FAD_binding_8 PF08022.12 CTQ29886.1 - 0.056 13.5 0.0 0.083 13.0 0.0 1.3 1 0 0 1 1 1 0 FAD-binding domain NAD_binding_6 PF08030.12 CTQ29886.1 - 0.21 11.7 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Thiolase_N PF00108.23 CTQ29887.1 - 2.6e-86 289.2 0.3 3.7e-86 288.7 0.3 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 CTQ29887.1 - 2.8e-51 172.3 0.2 2.8e-51 172.3 0.2 1.7 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 CTQ29887.1 - 2.5e-05 24.0 0.5 2.5e-05 24.0 0.5 1.8 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 CTQ29887.1 - 0.0011 18.8 0.2 0.41 10.5 0.1 2.5 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 3HCDH_N PF02737.18 CTQ29888.1 - 5.8e-61 205.5 0.3 1.8e-60 203.9 0.2 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 CTQ29888.1 - 5.5e-39 134.0 0.0 1.4e-38 132.7 0.0 1.6 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 CTQ29888.1 - 1.1e-34 119.0 0.8 3.2e-25 88.6 0.1 3.2 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 CTQ29888.1 - 6.5e-22 78.5 0.0 1.1e-21 77.7 0.0 1.4 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Peptidase_M24 PF00557.24 CTQ29889.1 - 4e-44 150.8 0.2 5e-44 150.5 0.2 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF3793 PF12672.7 CTQ29889.1 - 0.012 15.7 0.0 0.022 14.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3793) FCD PF07729.12 CTQ29889.1 - 0.015 15.7 1.8 0.048 14.1 0.8 2.0 2 0 0 2 2 2 0 FCD domain UPF0029 PF01205.19 CTQ29890.1 - 1.1e-26 93.3 0.0 1.5e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF1949 PF09186.11 CTQ29890.1 - 1.2e-17 63.6 0.0 2.2e-17 62.7 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1949) EFG_C PF00679.24 CTQ29890.1 - 0.021 14.8 0.0 0.035 14.1 0.0 1.3 1 0 0 1 1 1 0 Elongation factor G C-terminus TrkH PF02386.16 CTQ29891.1 - 1.1e-93 314.4 16.8 4e-93 312.5 16.8 1.7 1 1 0 1 1 1 1 Cation transport protein Flavodoxin_5 PF12724.7 CTQ29892.1 - 1.4e-52 177.8 0.0 1.8e-52 177.4 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.25 CTQ29892.1 - 2.7e-05 24.4 0.0 4.2e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 CTQ29892.1 - 0.0059 16.3 0.0 0.0085 15.8 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin domain SBP_bac_5 PF00496.22 CTQ29892.1 - 0.03 13.3 0.0 0.048 12.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle Peptidase_M48 PF01435.18 CTQ29893.1 - 4.4e-26 91.9 0.1 6.7e-26 91.3 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M48 LPAM_1 PF08139.12 CTQ29893.1 - 0.0078 16.6 0.3 0.016 15.7 0.3 1.5 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site OprD PF03573.13 CTQ29895.1 - 2.4e-124 415.4 14.1 2.7e-124 415.2 14.1 1.0 1 0 0 1 1 1 1 outer membrane porin, OprD family TPP_enzyme_N PF02776.18 CTQ29896.1 - 1.5e-42 145.1 2.3 2.3e-42 144.5 0.6 2.1 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 CTQ29896.1 - 9.4e-32 109.9 0.4 3.4e-31 108.1 0.2 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 CTQ29896.1 - 2.8e-20 72.5 0.0 5.9e-20 71.4 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain DXP_synthase_N PF13292.6 CTQ29896.1 - 0.061 12.5 0.1 0.14 11.4 0.1 1.5 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Aldedh PF00171.22 CTQ29897.1 - 2e-164 547.5 0.0 2.2e-164 547.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 CTQ29897.1 - 0.00044 19.4 0.0 0.00078 18.6 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) NIPSNAP PF07978.13 CTQ29897.1 - 0.037 14.2 0.0 0.078 13.2 0.0 1.5 1 0 0 1 1 1 0 NIPSNAP DUF108 PF01958.18 CTQ29898.1 - 1.1e-29 102.6 0.1 1.9e-29 101.9 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.16 CTQ29898.1 - 1.9e-12 47.9 0.1 8.1e-12 45.8 0.0 2.0 3 0 0 3 3 3 1 Homoserine dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 CTQ29898.1 - 0.0047 17.0 0.0 0.0082 16.2 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase DapB_N PF01113.20 CTQ29898.1 - 0.011 15.8 0.0 0.019 15.1 0.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus adh_short_C2 PF13561.6 CTQ29899.1 - 7e-44 150.1 0.0 1.1e-43 149.5 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ29899.1 - 2.3e-42 144.7 0.0 2.7e-42 144.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ29899.1 - 4.2e-08 33.3 0.0 8.5e-08 32.3 0.0 1.5 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ29899.1 - 0.0097 15.4 0.0 0.014 14.9 0.0 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Glyco_tran_WecB PF03808.13 CTQ29899.1 - 0.014 15.3 0.0 0.037 14.0 0.0 1.7 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family DUF1776 PF08643.10 CTQ29899.1 - 0.076 12.4 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Abhydrolase_1 PF00561.20 CTQ29900.1 - 2.1e-18 66.9 0.6 1.3e-17 64.3 0.6 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 CTQ29900.1 - 6.8e-17 62.8 11.5 8.3e-17 62.5 11.5 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 CTQ29900.1 - 3.6e-11 42.8 1.2 9.5e-11 41.4 1.2 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 CTQ29900.1 - 2.2e-05 23.3 0.0 3e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Ndr family Ser_hydrolase PF06821.13 CTQ29900.1 - 0.00012 22.0 0.0 0.0035 17.2 0.0 2.2 2 0 0 2 2 2 1 Serine hydrolase Thioesterase PF00975.20 CTQ29900.1 - 0.0002 21.6 0.7 0.00023 21.3 0.7 1.2 1 0 0 1 1 1 1 Thioesterase domain Esterase PF00756.20 CTQ29900.1 - 0.034 13.8 0.1 0.045 13.4 0.1 1.3 1 0 0 1 1 1 0 Putative esterase Acyl_transf_1 PF00698.21 CTQ29900.1 - 0.053 13.0 0.1 0.053 13.0 0.1 1.5 2 0 0 2 2 2 0 Acyl transferase domain Abhydrolase_5 PF12695.7 CTQ29900.1 - 0.056 13.2 0.0 0.14 11.9 0.0 1.6 1 1 0 1 1 1 0 Alpha/beta hydrolase family Lipase_3 PF01764.25 CTQ29900.1 - 0.095 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) Cupin_2 PF07883.11 CTQ29901.1 - 4.6e-11 42.3 0.0 7.5e-11 41.6 0.0 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 CTQ29901.1 - 1.7e-06 27.7 0.0 2.5e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Cupin FdtA PF05523.11 CTQ29901.1 - 6.6e-06 25.9 0.0 8.8e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 WxcM-like, C-terminal ARD PF03079.14 CTQ29901.1 - 0.001 19.3 0.1 0.0011 19.2 0.1 1.3 1 1 0 1 1 1 1 ARD/ARD' family Auxin_BP PF02041.16 CTQ29901.1 - 0.051 13.2 0.0 0.066 12.9 0.0 1.3 1 0 0 1 1 1 0 Auxin binding protein Cupin_3 PF05899.12 CTQ29901.1 - 0.052 13.2 0.0 0.086 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF861) 3-HAO PF06052.12 CTQ29901.1 - 0.072 12.7 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyanthranilic acid dioxygenase MFS_1 PF07690.16 CTQ29902.1 - 3.5e-44 151.2 44.6 3.5e-44 151.2 44.6 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily Pyr_redox_2 PF07992.14 CTQ29903.1 - 3.3e-52 177.6 0.0 4e-52 177.3 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 CTQ29903.1 - 1.7e-19 70.1 0.1 5.3e-19 68.6 0.1 1.9 1 0 0 1 1 1 1 Reductase C-terminal Pyr_redox PF00070.27 CTQ29903.1 - 1.1e-12 48.3 0.2 2.7e-10 40.6 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ29903.1 - 6.3e-09 35.9 1.2 2.1e-05 24.7 0.2 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 CTQ29903.1 - 7e-06 25.4 0.2 0.0012 18.1 0.0 2.6 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 CTQ29903.1 - 3.9e-05 22.5 2.0 0.37 9.5 0.2 3.7 3 1 1 4 4 4 2 HI0933-like protein DAO PF01266.24 CTQ29903.1 - 6.2e-05 22.7 10.5 0.027 14.1 0.4 3.7 2 2 1 4 4 4 3 FAD dependent oxidoreductase GIDA PF01134.22 CTQ29903.1 - 7.2e-05 22.0 0.7 0.017 14.3 0.1 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 CTQ29903.1 - 0.0002 20.7 0.4 0.26 10.5 0.1 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 CTQ29903.1 - 0.00083 19.8 0.0 0.82 10.1 0.0 2.4 2 0 0 2 2 2 2 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 CTQ29903.1 - 0.0017 17.8 0.6 0.0047 16.3 0.0 1.9 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 CTQ29903.1 - 0.0037 17.2 0.7 0.0087 16.0 0.1 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 CTQ29903.1 - 0.0065 15.8 0.0 0.083 12.1 0.0 2.1 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 CTQ29903.1 - 0.0072 15.6 0.2 0.97 8.6 0.0 2.2 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 CTQ29903.1 - 0.011 14.8 4.9 0.86 8.6 0.2 3.0 3 0 0 3 3 3 0 FAD binding domain Trp_halogenase PF04820.14 CTQ29903.1 - 0.041 12.7 1.4 0.42 9.4 0.1 2.7 3 0 0 3 3 3 0 Tryptophan halogenase IlvN PF07991.12 CTQ29903.1 - 0.051 13.1 0.0 2.6 7.6 0.0 2.4 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Lycopene_cycl PF05834.12 CTQ29903.1 - 0.069 12.2 1.3 1.8 7.5 0.1 2.5 3 0 0 3 3 3 0 Lycopene cyclase protein TrkA_N PF02254.18 CTQ29903.1 - 0.18 12.0 0.2 14 6.0 0.0 2.6 2 0 0 2 2 2 0 TrkA-N domain Glyoxalase PF00903.25 CTQ29904.1 - 1.5e-13 51.1 0.2 1.5e-12 47.8 0.1 2.4 2 1 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 CTQ29904.1 - 0.0022 18.2 0.1 0.8 10.0 0.1 3.1 2 1 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 CTQ29904.1 - 0.045 14.5 0.0 0.17 12.7 0.0 1.9 2 0 0 2 2 2 0 Glyoxalase-like domain Glyoxalase_3 PF13468.6 CTQ29904.1 - 0.1 12.7 0.1 1.4 9.0 0.0 2.6 2 1 1 3 3 3 0 Glyoxalase-like domain IclR PF01614.18 CTQ29905.1 - 3.4e-20 72.2 0.0 5.4e-20 71.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 CTQ29905.1 - 9.6e-16 57.3 0.3 1.9e-15 56.4 0.3 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 CTQ29905.1 - 3.2e-05 23.7 0.0 8.1e-05 22.4 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 CTQ29905.1 - 0.0037 17.2 0.0 0.0078 16.1 0.0 1.5 1 0 0 1 1 1 1 MarR family sCache_3_2 PF17203.4 CTQ29905.1 - 0.0048 17.0 0.2 3 8.0 0.0 2.3 2 0 0 2 2 2 2 Single cache domain 3 HTH_20 PF12840.7 CTQ29905.1 - 0.039 14.0 0.2 0.1 12.7 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_27 PF13463.6 CTQ29905.1 - 0.069 13.6 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR_2 PF12802.7 CTQ29905.1 - 0.083 12.8 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 MarR family Replic_Relax PF13814.6 CTQ29905.1 - 0.19 11.8 0.1 0.27 11.3 0.1 1.2 1 0 0 1 1 1 0 Replication-relaxation adh_short_C2 PF13561.6 CTQ29906.1 - 1.9e-60 204.4 2.1 2.1e-60 204.2 2.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ29906.1 - 2.4e-47 160.9 1.6 2.8e-47 160.7 1.6 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ29906.1 - 4e-14 52.9 2.1 5.6e-14 52.5 2.1 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CTQ29906.1 - 0.0018 17.8 0.6 0.0034 16.9 0.6 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 CTQ29906.1 - 0.019 14.9 1.3 0.024 14.5 0.5 1.5 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Methyltransf_25 PF13649.6 CTQ29906.1 - 0.13 13.0 0.1 0.25 12.1 0.1 1.5 1 0 0 1 1 1 0 Methyltransferase domain Rieske PF00355.26 CTQ29907.1 - 2.3e-18 65.9 0.0 3.9e-18 65.2 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Aromatic_hydrox PF11723.8 CTQ29907.1 - 0.023 14.2 0.2 0.15 11.5 0.0 2.1 1 1 0 2 2 2 0 Homotrimeric ring hydroxylase Rieske PF00355.26 CTQ29909.1 - 1.1e-19 70.1 0.0 1.3e-19 69.9 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 CTQ29909.1 - 1.3e-15 57.2 0.0 1.5e-15 57.0 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain MFS_1 PF07690.16 CTQ29910.1 - 2.4e-24 85.9 41.0 1.4e-19 70.2 17.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Arginase PF00491.21 CTQ29912.1 - 2e-85 286.7 0.3 2.4e-85 286.4 0.3 1.0 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.7 CTQ29912.1 - 0.18 12.0 0.1 0.27 11.4 0.1 1.3 1 0 0 1 1 1 0 UPF0489 domain Orn_Arg_deC_N PF02784.16 CTQ29913.1 - 1.1e-71 241.1 0.1 1.6e-71 240.6 0.1 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Arg_decarb_HB PF17810.1 CTQ29913.1 - 8.5e-24 83.6 0.8 2.5e-23 82.1 0.8 1.9 1 0 0 1 1 1 1 Arginine decarboxylase helical bundle domain Arg_decarbox_C PF17944.1 CTQ29913.1 - 1.2e-16 61.0 3.5 1.9e-16 60.3 1.2 2.5 2 0 0 2 2 2 1 Arginine decarboxylase C-terminal helical extension S-AdoMet_synt_C PF02773.16 CTQ29914.1 - 4e-70 234.2 0.0 7.7e-70 233.2 0.0 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 CTQ29914.1 - 1.4e-46 157.6 0.0 4.5e-46 156.0 0.0 1.8 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 CTQ29914.1 - 2.9e-43 146.6 0.1 5.4e-43 145.7 0.1 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 CTQ29914.1 - 0.11 11.3 0.4 1.1 8.0 0.1 2.3 2 1 1 3 3 3 0 S-adenosylmethionine synthetase (AdoMet synthetase) Sugar_tr PF00083.24 CTQ29915.1 - 7.7e-139 463.4 28.2 8.7e-139 463.2 28.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 CTQ29915.1 - 6e-42 143.8 44.9 7.8e-31 107.3 16.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 CTQ29915.1 - 1.5e-09 36.8 5.6 1.5e-09 36.8 5.6 2.1 2 0 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 CTQ29915.1 - 3.9e-08 32.3 36.1 1.1e-07 30.8 4.8 3.6 3 1 0 3 3 3 2 MFS/sugar transport protein PglL_A PF15864.5 CTQ29915.1 - 0.28 11.0 0.1 0.28 11.0 0.1 2.9 2 0 0 2 2 2 0 Protein glycosylation ligase SHR3_chaperone PF08229.11 CTQ29915.1 - 2.5 7.0 7.5 48 2.9 0.6 3.4 2 2 1 3 3 3 0 ER membrane protein SH3 SprT-like PF10263.9 CTQ29916.1 - 1e-17 64.0 0.1 1.6e-17 63.4 0.0 1.3 1 1 0 1 1 1 1 SprT-like family Zn_ribbon_SprT PF17283.2 CTQ29916.1 - 9.9e-09 35.0 4.8 1.9e-08 34.0 4.8 1.4 1 0 0 1 1 1 1 SprT-like zinc ribbon domain DUF45 PF01863.17 CTQ29916.1 - 4.8e-05 23.5 0.7 0.00012 22.2 0.3 1.6 1 1 0 2 2 2 1 Protein of unknown function DUF45 DUF3267 PF11667.8 CTQ29916.1 - 0.14 12.5 0.1 0.21 11.9 0.1 1.3 1 0 0 1 1 1 0 Putative zincin peptidase zf-CSL PF05207.13 CTQ29916.1 - 0.47 10.2 5.4 3.4 7.5 0.5 2.3 1 1 1 2 2 2 0 CSL zinc finger Endonuclease_1 PF04231.13 CTQ29917.1 - 7.3e-48 163.3 6.5 1.3e-47 162.5 6.5 1.4 1 1 0 1 1 1 1 Endonuclease I Methyltrans_RNA PF04452.14 CTQ29918.1 - 4.2e-72 242.2 0.1 4.8e-72 242.0 0.1 1.0 1 0 0 1 1 1 1 RNA methyltransferase Helicase_IV_N PF12462.8 CTQ29918.1 - 0.018 15.0 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal GSH-S_ATP PF02955.16 CTQ29919.1 - 2.6e-79 264.7 0.0 3.8e-79 264.2 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain GSH-S_N PF02951.14 CTQ29919.1 - 1.2e-47 160.9 0.0 1.9e-47 160.3 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, N-terminal domain RimK PF08443.11 CTQ29919.1 - 6.9e-10 38.8 0.0 9.8e-10 38.3 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_YheCD PF14398.6 CTQ29919.1 - 7.5e-07 28.7 0.0 1.2e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATP-grasp_3 PF02655.14 CTQ29919.1 - 0.045 13.8 0.0 0.063 13.3 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain DUF179 PF02622.15 CTQ29920.1 - 1.1e-48 165.2 0.0 1.3e-48 165.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 RuvX PF03652.15 CTQ29921.1 - 1.4e-42 145.3 0.0 1.5e-42 145.2 0.0 1.0 1 0 0 1 1 1 1 Holliday junction resolvase Erythro-docking PF09277.11 CTQ29921.1 - 0.024 14.5 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 Erythronolide synthase, docking GerE PF00196.19 CTQ29922.1 - 2.7e-20 71.7 0.0 4.4e-20 71.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_24 PF13412.6 CTQ29922.1 - 0.002 17.6 0.1 0.0054 16.3 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 CTQ29922.1 - 0.0055 16.3 0.0 0.0098 15.6 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 CTQ29922.1 - 0.019 14.8 0.0 0.038 13.8 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_10 PF04967.12 CTQ29922.1 - 0.15 11.9 0.1 1.1 9.1 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain T2SSE PF00437.20 CTQ29923.1 - 6.7e-41 140.2 0.0 9e-41 139.7 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_16 PF13191.6 CTQ29923.1 - 0.00016 22.1 0.3 0.00039 20.8 0.3 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 CTQ29923.1 - 0.001 18.8 0.0 0.0033 17.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CTQ29923.1 - 0.0012 18.6 1.0 0.0018 18.0 0.3 1.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain FtsK_SpoIIIE PF01580.18 CTQ29923.1 - 0.0014 18.0 0.5 0.003 17.0 0.2 1.6 2 0 0 2 2 2 1 FtsK/SpoIIIE family ABC_tran PF00005.27 CTQ29923.1 - 0.0015 19.1 0.0 0.0024 18.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 CTQ29923.1 - 0.0027 18.0 0.0 0.0054 17.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain DUF87 PF01935.17 CTQ29923.1 - 0.0063 16.6 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_23 PF13476.6 CTQ29923.1 - 0.0083 16.6 0.0 0.013 16.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 CTQ29923.1 - 0.012 15.9 0.4 0.021 15.1 0.4 1.6 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 CTQ29923.1 - 0.028 13.3 0.1 0.047 12.6 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain PELOTA_1 PF15608.6 CTQ29923.1 - 0.071 13.0 0.1 0.15 12.0 0.1 1.5 1 0 0 1 1 1 0 PELOTA RNA binding domain NTPase_P4 PF11602.8 CTQ29923.1 - 0.097 11.9 0.2 0.16 11.2 0.2 1.2 1 0 0 1 1 1 0 ATPase P4 of dsRNA bacteriophage phi-12 AAA_25 PF13481.6 CTQ29923.1 - 0.15 11.6 1.0 0.31 10.6 1.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 CTQ29923.1 - 0.16 11.5 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ATP_bind_1 PF03029.17 CTQ29923.1 - 0.23 11.2 0.0 0.36 10.6 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Zeta_toxin PF06414.12 CTQ29923.1 - 0.26 10.6 0.3 0.43 9.8 0.3 1.5 1 1 0 1 1 1 0 Zeta toxin Ala_racemase_N PF01168.20 CTQ29924.1 - 4.5e-31 108.2 0.4 5.3e-31 108.0 0.4 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain YGGT PF02325.17 CTQ29925.1 - 1.3e-36 124.8 23.1 3e-21 75.6 3.7 2.6 1 1 2 3 3 3 2 YGGT family DUF167 PF02594.16 CTQ29926.1 - 1.4e-26 92.4 0.2 1.6e-26 92.2 0.2 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Ham1p_like PF01725.16 CTQ29927.1 - 2e-62 210.5 0.0 2.2e-62 210.3 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Radical_SAM PF04055.21 CTQ29928.1 - 9.4e-20 71.7 0.0 1.4e-19 71.0 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily HemN_C PF06969.16 CTQ29928.1 - 5.4e-10 39.2 0.1 1.4e-09 37.9 0.1 1.8 1 0 0 1 1 1 1 HemN C-terminal domain Fer4_14 PF13394.6 CTQ29928.1 - 0.077 13.1 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain TPR_1 PF00515.28 CTQ29928.1 - 0.09 12.6 0.1 0.22 11.4 0.1 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 CTQ29928.1 - 0.11 12.7 3.6 0.55 10.5 0.1 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat HTH_45 PF14947.6 CTQ29928.1 - 0.19 11.7 0.0 1.5 8.9 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DUF2884 PF11101.8 CTQ29929.1 - 3.4e-41 141.2 0.2 3.9e-41 141.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2884) Cadherin_4 PF17803.1 CTQ29929.1 - 0.13 12.9 0.0 0.27 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial cadherin-like domain DUF469 PF04320.14 CTQ29930.1 - 5.9e-42 142.6 0.4 6.9e-42 142.4 0.4 1.0 1 0 0 1 1 1 1 Protein with unknown function (DUF469) Methyltransf_4 PF02390.17 CTQ29931.1 - 7.9e-62 207.8 0.0 9.6e-62 207.5 0.0 1.1 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_25 PF13649.6 CTQ29931.1 - 0.00059 20.5 0.0 0.0012 19.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 CTQ29931.1 - 0.025 13.8 0.0 0.03 13.5 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_24 PF13578.6 CTQ29931.1 - 0.13 13.3 0.0 0.25 12.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain NUDIX_4 PF14815.6 CTQ29932.1 - 8.2e-24 83.7 0.1 1.4e-23 82.9 0.1 1.4 1 0 0 1 1 1 1 NUDIX domain HhH-GPD PF00730.25 CTQ29932.1 - 3e-22 79.1 0.0 4.9e-22 78.4 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 CTQ29932.1 - 5.9e-09 35.3 0.0 1.2e-08 34.4 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 CTQ29932.1 - 4e-05 23.8 4.5 7.5e-05 22.9 4.5 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_8 PF14716.6 CTQ29932.1 - 0.18 12.2 0.0 0.35 11.3 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix domain Iron_traffic PF04362.14 CTQ29933.1 - 1.4e-40 136.9 0.4 1.5e-40 136.8 0.4 1.0 1 0 0 1 1 1 1 Bacterial Fe(2+) trafficking DUF5412 PF17428.2 CTQ29933.1 - 0.031 14.1 0.1 0.042 13.7 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5412) Mltc_N PF11873.8 CTQ29934.1 - 1.1e-68 230.1 0.0 1.5e-68 229.7 0.0 1.2 1 0 0 1 1 1 1 Membrane-bound lytic murein transglycosylase C, N-terminal domain SLT PF01464.20 CTQ29934.1 - 9.2e-32 109.2 0.1 2e-31 108.1 0.1 1.6 1 0 0 1 1 1 1 Transglycosylase SLT domain Lysozyme_like PF13702.6 CTQ29934.1 - 0.0006 19.5 0.1 0.015 15.0 0.1 2.3 1 1 0 1 1 1 1 Lysozyme-like SLT_2 PF13406.6 CTQ29934.1 - 0.0013 18.1 0.0 0.0023 17.2 0.0 1.4 1 0 0 1 1 1 1 Transglycosylase SLT domain Nuc_H_symport PF03825.16 CTQ29935.1 - 2.2e-179 596.6 34.3 2.5e-179 596.4 34.3 1.0 1 0 0 1 1 1 1 Nucleoside H+ symporter MFS_1_like PF12832.7 CTQ29935.1 - 4.8e-22 78.4 32.5 3.4e-21 75.5 32.5 1.9 1 1 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 CTQ29935.1 - 3.6e-14 52.5 65.4 1e-09 37.8 15.5 2.7 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 CTQ29935.1 - 0.00093 18.1 31.0 0.0023 16.8 31.0 1.8 1 1 0 1 1 1 1 LacY proton/sugar symporter OKR_DC_1 PF01276.20 CTQ29936.1 - 8.3e-198 657.3 0.0 1e-197 656.9 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.15 CTQ29936.1 - 1.2e-48 164.7 0.0 2.9e-48 163.5 0.0 1.7 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain OKR_DC_1_N PF03709.15 CTQ29936.1 - 4.3e-14 52.7 0.1 1.5e-13 51.0 0.0 1.9 2 0 0 2 2 2 1 Orn/Lys/Arg decarboxylase, N-terminal domain Beta_elim_lyase PF01212.21 CTQ29936.1 - 0.0035 16.7 0.0 0.0051 16.1 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DUF554 PF04474.12 CTQ29937.1 - 1.4e-65 220.8 26.2 1.6e-65 220.7 26.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF554) SPC12 PF06645.13 CTQ29937.1 - 5.2 7.2 13.4 2.1 8.5 0.1 3.1 3 0 0 3 3 3 0 Microsomal signal peptidase 12 kDa subunit (SPC12) NACHT PF05729.12 CTQ29939.1 - 3e-06 27.3 1.2 0.012 15.6 0.0 3.5 2 1 1 3 3 3 2 NACHT domain AAA_22 PF13401.6 CTQ29939.1 - 0.0017 18.6 0.0 0.29 11.4 0.0 3.4 3 0 0 3 3 3 1 AAA domain AAA_18 PF13238.6 CTQ29939.1 - 0.0044 17.6 0.2 0.16 12.5 0.0 3.0 2 1 0 2 2 2 1 AAA domain DUF87 PF01935.17 CTQ29939.1 - 0.062 13.4 0.0 0.22 11.6 0.0 2.0 1 0 0 1 1 1 0 Helicase HerA, central domain AAA PF00004.29 CTQ29939.1 - 0.074 13.5 0.0 0.22 11.9 0.0 1.9 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 CTQ29939.1 - 0.16 11.1 0.0 0.34 10.0 0.0 1.5 1 0 0 1 1 1 0 MCM P-loop domain HSA PF07529.13 CTQ29940.1 - 0.11 12.8 0.2 0.13 12.7 0.2 1.0 1 0 0 1 1 1 0 HSA Annexin PF00191.20 CTQ29941.1 - 0.069 13.2 0.2 0.14 12.3 0.1 1.6 2 0 0 2 2 2 0 Annexin Acetyltransf_7 PF13508.7 CTQ29942.1 - 2e-08 34.5 0.0 2.8e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ29942.1 - 1e-07 32.0 0.0 3.2e-07 30.3 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ29942.1 - 1.5e-05 25.2 0.0 1.9e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 CTQ29942.1 - 0.06 13.3 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein DUF1778 PF08681.11 CTQ29943.1 - 3.1e-25 87.9 4.7 3.8e-25 87.6 4.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1778) RHH_1 PF01402.21 CTQ29943.1 - 0.00054 19.8 1.9 0.00079 19.3 1.0 1.8 2 1 0 2 2 2 1 Ribbon-helix-helix protein, copG family PALP PF00291.25 CTQ29945.1 - 1.4e-60 205.2 0.0 1.8e-60 204.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CBS PF00571.28 CTQ29945.1 - 8.1e-17 61.4 0.6 5.2e-09 36.4 0.1 3.3 4 0 0 4 4 4 2 CBS domain Cys_Met_Meta_PP PF01053.20 CTQ29946.1 - 2.1e-141 470.9 0.0 2.3e-141 470.8 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 CTQ29946.1 - 7.6e-05 22.0 0.0 0.00019 20.7 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 CTQ29946.1 - 0.0011 18.3 0.1 0.0024 17.2 0.1 1.6 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 CTQ29946.1 - 0.018 14.0 0.0 0.025 13.5 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-V Beta_elim_lyase PF01212.21 CTQ29946.1 - 0.022 14.0 0.0 0.037 13.3 0.0 1.4 1 0 0 1 1 1 0 Beta-eliminating lyase DUF4880 PF16220.5 CTQ29946.1 - 9.4 6.2 10.5 2.7 8.0 2.2 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4880) LysR_substrate PF03466.20 CTQ29947.1 - 3.1e-47 160.7 7.1 4.7e-47 160.0 7.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ29947.1 - 2e-18 66.1 0.7 4.9e-18 64.8 0.7 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family adh_short_C2 PF13561.6 CTQ29948.1 - 5.7e-16 58.8 0.0 7e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ29948.1 - 7.1e-13 48.5 0.5 1.2e-10 41.1 0.5 2.1 1 1 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 CTQ29948.1 - 3.7e-06 26.6 0.1 4.8e-06 26.2 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family KR PF08659.10 CTQ29948.1 - 4.6e-06 26.7 0.2 0.00079 19.4 0.0 2.1 1 1 1 2 2 2 2 KR domain RmlD_sub_bind PF04321.17 CTQ29948.1 - 2.5e-05 23.5 0.1 3.6e-05 23.0 0.1 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain DapB_N PF01113.20 CTQ29948.1 - 0.0017 18.5 2.0 0.018 15.1 0.2 2.1 1 1 1 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 CTQ29948.1 - 0.005 17.1 0.3 0.037 14.3 0.2 2.1 1 1 1 2 2 2 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 CTQ29948.1 - 0.022 14.6 1.0 0.067 13.1 1.0 1.8 1 1 0 1 1 1 0 NAD(P)H-binding THF_DHG_CYH_C PF02882.19 CTQ29948.1 - 0.097 12.0 0.4 0.16 11.3 0.0 1.5 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF2713 PF10897.8 CTQ29949.1 - 0.029 14.0 0.0 0.03 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2713) Aminotran_1_2 PF00155.21 CTQ29951.1 - 6e-36 124.4 0.0 7.1e-36 124.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 CTQ29951.1 - 4.8e-13 48.7 0.0 9.8e-13 47.7 0.0 1.6 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase Beta_elim_lyase PF01212.21 CTQ29951.1 - 0.001 18.4 0.0 0.0018 17.6 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 CTQ29951.1 - 0.0081 14.7 0.0 0.011 14.3 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 CTQ29951.1 - 0.013 14.9 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family MreC PF04085.14 CTQ29951.1 - 0.11 12.4 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 rod shape-determining protein MreC Aminotran_3 PF00202.21 CTQ29951.1 - 0.13 10.9 0.0 0.69 8.5 0.0 1.8 1 1 0 1 1 1 0 Aminotransferase class-III GSP_synth PF03738.14 CTQ29952.1 - 1.4e-65 221.9 0.0 1.9e-65 221.5 0.0 1.1 1 0 0 1 1 1 1 Glutathionylspermidine synthase preATP-grasp CHAP PF05257.16 CTQ29952.1 - 7.3e-12 45.7 0.0 2e-11 44.3 0.0 1.8 1 0 0 1 1 1 1 CHAP domain Thioredoxin_4 PF13462.6 CTQ29953.1 - 1e-05 25.7 0.0 2e-05 24.8 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin Glutaredoxin PF00462.24 CTQ29953.1 - 0.15 12.3 0.0 0.5 10.6 0.0 1.9 2 0 0 2 2 2 0 Glutaredoxin GST_C_2 PF13410.6 CTQ29954.1 - 3.5e-09 36.6 0.1 3.5e-09 36.6 0.1 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 CTQ29954.1 - 5.6e-06 26.6 0.0 1.2e-05 25.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 CTQ29954.1 - 1.1e-05 25.6 0.3 2.4e-05 24.4 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 CTQ29954.1 - 2.7e-05 24.3 0.0 4.8e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 CTQ29954.1 - 4.1e-05 23.8 0.0 0.00013 22.1 0.0 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 CTQ29954.1 - 0.00068 20.0 0.0 0.0016 18.8 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF2623 PF11115.8 CTQ29955.1 - 1.7e-47 159.4 3.7 1.9e-47 159.2 3.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2623) DLH PF01738.18 CTQ29956.1 - 5.2e-52 176.5 0.2 6.3e-52 176.3 0.2 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 CTQ29956.1 - 2.1e-05 24.2 0.2 5.7e-05 22.8 0.1 1.8 1 1 1 2 2 2 1 X-Pro dipeptidyl-peptidase (S15 family) Peptidase_S9 PF00326.21 CTQ29956.1 - 0.00036 20.1 2.0 0.38 10.2 0.2 2.5 1 1 1 2 2 2 2 Prolyl oligopeptidase family BAAT_C PF08840.11 CTQ29956.1 - 0.0032 17.4 2.2 0.051 13.5 0.1 2.4 1 1 0 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_3 PF07859.13 CTQ29956.1 - 0.081 12.8 0.4 0.49 10.2 0.0 2.3 2 1 1 3 3 3 0 alpha/beta hydrolase fold GAF_2 PF13185.6 CTQ29956.1 - 0.11 12.8 0.1 0.33 11.2 0.1 1.7 1 1 1 2 2 2 0 GAF domain UPF0114 PF03350.16 CTQ29957.1 - 4.4e-36 123.7 4.9 4.4e-36 123.7 4.9 1.4 2 0 0 2 2 2 1 Uncharacterized protein family, UPF0114 RPAP3_C PF13877.6 CTQ29957.1 - 0.14 12.7 0.4 13 6.4 0.0 2.2 1 1 1 2 2 2 0 Potential Monad-binding region of RPAP3 SYS1 PF09801.9 CTQ29957.1 - 0.15 12.2 4.2 0.38 10.9 0.1 2.2 2 0 0 2 2 2 0 Integral membrane protein S linking to the trans Golgi network Glyco_hydro_43 PF04616.14 CTQ29958.1 - 1.4e-61 208.3 0.5 1.9e-61 207.9 0.5 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 GH43_C2 PF17851.1 CTQ29958.1 - 5.1e-23 81.9 0.0 7.4e-23 81.3 0.0 1.2 1 0 0 1 1 1 1 Beta xylosidase C-terminal Concanavalin A-like domain MFS_2 PF13347.6 CTQ29959.1 - 1e-102 343.9 39.3 1.2e-102 343.7 39.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 CTQ29959.1 - 2.9e-13 49.5 34.2 2.9e-13 49.5 34.2 2.1 1 1 0 2 2 2 1 Major Facilitator Superfamily Rubella_Capsid PF05750.11 CTQ29959.1 - 0.24 11.0 0.1 0.36 10.4 0.1 1.1 1 0 0 1 1 1 0 Rubella capsid protein BT1 PF03092.16 CTQ29959.1 - 2.2 6.4 21.2 0.33 9.1 2.6 2.6 2 1 1 3 3 3 0 BT1 family ExbD PF02472.16 CTQ29960.1 - 1.9e-31 109.0 0.4 2.1e-31 108.8 0.4 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR NETI PF14044.6 CTQ29960.1 - 0.2 11.4 0.1 11 5.8 0.0 2.3 2 0 0 2 2 2 0 NETI protein MotA_ExbB PF01618.16 CTQ29961.1 - 2.3e-33 114.7 2.3 4.9e-33 113.6 2.3 1.6 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family LapA_dom PF06305.11 CTQ29961.1 - 0.22 11.4 6.0 0.065 13.1 1.5 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Cys_Met_Meta_PP PF01053.20 CTQ29963.1 - 5.6e-119 397.1 0.0 6.3e-119 396.9 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 CTQ29963.1 - 0.0035 16.3 0.0 0.0054 15.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V SNARE_assoc PF09335.11 CTQ29964.1 - 5.8e-19 68.8 4.4 5.8e-19 68.8 4.4 1.8 3 0 0 3 3 3 1 SNARE associated Golgi protein AraC_N PF06719.13 CTQ29965.1 - 1.2e-37 128.9 0.0 1.7e-37 128.3 0.0 1.3 1 0 0 1 1 1 1 AraC-type transcriptional regulator N-terminus HTH_18 PF12833.7 CTQ29965.1 - 3.8e-22 78.4 0.6 7.5e-22 77.4 0.6 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ29965.1 - 2.1e-19 69.1 0.5 7e-09 35.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family TetR_N PF00440.23 CTQ29965.1 - 0.004 16.9 0.2 0.03 14.1 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Fe-ADH PF00465.19 CTQ29966.1 - 1.1e-94 317.2 0.1 1.4e-94 317.0 0.1 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ29966.1 - 3.8e-10 39.9 0.1 4.8e-06 26.5 0.0 2.3 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 CTQ29966.1 - 0.00044 19.5 0.1 0.17 11.0 0.0 2.7 3 0 0 3 3 3 2 3-dehydroquinate synthase Aldo_ket_red PF00248.21 CTQ29967.1 - 8.6e-51 172.9 0.0 2.8e-48 164.6 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Acetyltransf_1 PF00583.25 CTQ29968.1 - 1.8e-07 31.4 0.0 2.2e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ29968.1 - 1.4e-06 28.2 0.0 1.9e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ29968.1 - 0.0018 18.6 0.0 0.003 18.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ29968.1 - 0.031 14.4 0.0 0.039 14.1 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Radical_SAM_N PF08497.10 CTQ29969.1 - 1.6e-145 484.0 0.0 2.1e-145 483.6 0.0 1.2 1 0 0 1 1 1 1 Radical SAM N-terminal DUF3362 PF11842.8 CTQ29969.1 - 8e-44 149.6 0.7 1.5e-43 148.7 0.7 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3362) Radical_SAM PF04055.21 CTQ29969.1 - 3e-20 73.3 0.1 7.7e-20 71.9 0.1 1.8 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 CTQ29969.1 - 0.0047 17.0 0.0 1.8 8.6 0.0 2.7 2 1 0 2 2 2 2 B12 binding domain Helitron_like_N PF14214.6 CTQ29969.1 - 0.063 13.5 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Helitron helicase-like domain at N-terminus Cu-oxidase_3 PF07732.15 CTQ29970.1 - 9e-24 83.8 0.2 3.5e-23 81.9 0.1 2.0 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 CTQ29970.1 - 7.8e-13 48.3 0.0 1.5e-12 47.4 0.0 1.4 1 0 0 1 1 1 1 Multicopper oxidase TAT_signal PF10518.9 CTQ29970.1 - 0.0016 18.2 1.5 0.0033 17.2 1.5 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Cu-oxidase PF00394.22 CTQ29970.1 - 0.0017 18.5 0.0 0.0035 17.5 0.0 1.4 1 0 0 1 1 1 1 Multicopper oxidase Acyltransferase PF01553.21 CTQ29971.1 - 4.6e-32 110.5 0.0 6.7e-32 109.9 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase DNA_topoisoIV PF00521.20 CTQ29972.1 - 1.7e-134 448.9 0.0 2e-134 448.7 0.0 1.0 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 CTQ29972.1 - 5.7e-15 54.5 0.0 7.2e-08 31.8 0.0 3.0 2 0 0 2 2 2 2 DNA gyrase C-terminal domain, beta-propeller DUF4890 PF16231.5 CTQ29972.1 - 0.024 15.1 0.8 0.076 13.5 0.8 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4890) SWIRM-assoc_1 PF16495.5 CTQ29972.1 - 0.26 11.3 5.7 0.65 10.0 5.7 1.7 1 0 0 1 1 1 0 SWIRM-associated region 1 GyrI-like PF06445.15 CTQ29973.1 - 8e-36 123.7 0.0 1.4e-35 122.9 0.0 1.4 1 0 0 1 1 1 1 GyrI-like small molecule binding domain HTH_18 PF12833.7 CTQ29973.1 - 5.4e-22 77.9 0.9 1.3e-21 76.6 0.9 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ29973.1 - 1.1e-14 54.0 0.1 4.3e-07 29.9 0.0 2.6 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cass2 PF14526.6 CTQ29973.1 - 2e-09 37.8 0.0 4.2e-09 36.7 0.0 1.6 2 0 0 2 2 2 1 Integron-associated effector binding protein BOF PF04076.13 CTQ29974.1 - 5.4e-41 138.8 1.4 6.6e-41 138.5 1.4 1.1 1 0 0 1 1 1 1 Bacterial OB fold (BOF) protein Trans_reg_C PF00486.28 CTQ29975.1 - 9.2e-23 80.1 0.1 2e-22 79.1 0.1 1.6 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 CTQ29975.1 - 2.9e-21 75.7 0.0 3.9e-21 75.3 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain RHH_1 PF01402.21 CTQ29975.1 - 0.097 12.6 2.1 1.8 8.6 0.4 3.3 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family HATPase_c PF02518.26 CTQ29976.1 - 3.6e-18 66.1 0.0 5.7e-18 65.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ29976.1 - 5.1e-13 48.9 1.6 1.5e-12 47.4 1.6 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain 2CSK_N PF08521.10 CTQ29976.1 - 5.9e-05 23.2 0.3 0.00026 21.1 0.2 2.1 2 1 0 2 2 2 1 Two-component sensor kinase N-terminal HATPase_c_3 PF13589.6 CTQ29976.1 - 0.024 14.5 0.0 0.044 13.6 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF3232 PF11554.8 CTQ29976.1 - 0.13 12.7 0.1 1.3 9.4 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3232) HATPase_c_5 PF14501.6 CTQ29976.1 - 0.13 12.2 0.0 1.1 9.3 0.0 2.1 1 1 0 1 1 1 0 GHKL domain Flavodoxin_2 PF02525.17 CTQ29977.1 - 1e-36 126.5 0.6 1.8e-36 125.7 0.6 1.3 1 1 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 CTQ29977.1 - 0.045 13.5 0.1 0.46 10.2 0.1 2.1 1 1 0 1 1 1 0 NADPH-dependent FMN reductase ABM PF03992.16 CTQ29978.1 - 6.1e-26 90.3 0.4 7.3e-26 90.1 0.4 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF4188 PF13826.6 CTQ29978.1 - 0.053 13.9 0.1 0.059 13.7 0.1 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4188) DNA_gyraseB PF00204.25 CTQ29979.1 - 9.3e-40 135.9 0.0 2.2e-39 134.7 0.0 1.6 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 CTQ29979.1 - 4.2e-24 84.5 1.0 9.3e-24 83.4 1.0 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 CTQ29979.1 - 7.1e-17 61.9 0.1 1.3e-16 61.1 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 CTQ29979.1 - 3.7e-11 43.2 0.0 6.9e-11 42.3 0.0 1.5 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 CTQ29979.1 - 0.00094 19.0 0.0 0.002 18.0 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPRIM_C PF16898.5 CTQ29979.1 - 0.017 15.4 0.0 0.032 14.5 0.0 1.4 1 0 0 1 1 1 0 C-terminal associated domain of TOPRIM UPF0227 PF05728.12 CTQ29980.1 - 8.3e-70 234.5 0.0 9.3e-70 234.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) Abhydrolase_6 PF12697.7 CTQ29980.1 - 0.00048 20.8 0.7 0.019 15.6 0.1 2.1 1 1 1 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 CTQ29980.1 - 0.034 13.4 0.0 0.12 11.6 0.0 1.9 1 1 0 2 2 2 0 Serine aminopeptidase, S33 DUF2048 PF09752.9 CTQ29980.1 - 0.18 10.9 0.0 0.29 10.2 0.0 1.2 1 0 0 1 1 1 0 Abhydrolase domain containing 18 Metallophos PF00149.28 CTQ29981.1 - 1.2e-18 68.4 0.4 1.5e-18 68.1 0.4 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 CTQ29981.1 - 3.6e-08 33.8 0.1 6.5e-08 32.9 0.1 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF1249 PF06853.12 CTQ29982.1 - 1.5e-41 141.0 0.4 1.8e-41 140.8 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1249) LuxS PF02664.15 CTQ29982.1 - 0.14 11.9 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 S-Ribosylhomocysteinase (LuxS) NUDIX PF00293.28 CTQ29983.1 - 2.3e-12 47.1 0.6 3.1e-12 46.7 0.6 1.2 1 0 0 1 1 1 1 NUDIX domain DUF3892 PF13031.6 CTQ29983.1 - 0.035 14.7 0.1 2 9.1 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3892) HTH_Tnp_1 PF01527.20 CTQ29983.1 - 0.056 13.8 1.0 0.76 10.1 0.1 2.4 2 0 0 2 2 2 0 Transposase OEP PF02321.18 CTQ29984.1 - 4e-59 199.6 39.7 1.9e-32 112.6 16.0 2.1 2 0 0 2 2 2 2 Outer membrane efflux protein DisA-linker PF10635.9 CTQ29984.1 - 0.6 9.9 5.1 0.21 11.4 0.4 2.4 2 0 0 2 2 2 0 DisA bacterial checkpoint controller linker region DUF148 PF02520.17 CTQ29984.1 - 2.7 8.1 14.3 4.1 7.5 0.2 4.1 2 1 1 4 4 4 0 Domain of unknown function DUF148 MnmE_helical PF12631.7 CTQ29984.1 - 6.8 6.8 8.4 4.7 7.3 0.3 2.8 2 2 0 2 2 2 0 MnmE helical domain DUF1190 PF06693.11 CTQ29985.1 - 8.5e-57 192.0 13.8 1.1e-56 191.7 13.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1190) SARAF PF06682.12 CTQ29985.1 - 0.0001 22.1 5.2 0.00012 21.8 5.2 1.1 1 0 0 1 1 1 1 SOCE-associated regulatory factor of calcium homoeostasis GSP_synth PF03738.14 CTQ29986.1 - 5.6e-160 532.6 0.1 6.3e-160 532.5 0.1 1.0 1 0 0 1 1 1 1 Glutathionylspermidine synthase preATP-grasp TRCF PF03461.15 CTQ29986.1 - 0.13 12.6 0.0 0.31 11.4 0.0 1.6 1 0 0 1 1 1 0 TRCF domain LigB PF02900.18 CTQ29987.1 - 3.4e-27 95.2 0.0 4e-27 95.0 0.0 1.1 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase DltD PF04914.12 CTQ29987.1 - 0.24 10.7 0.0 0.32 10.3 0.0 1.1 1 0 0 1 1 1 0 DltD protein Zip PF02535.22 CTQ29988.1 - 4.7e-30 105.0 23.0 7.1e-24 84.6 9.7 2.1 1 1 1 2 2 2 2 ZIP Zinc transporter DHBP_synthase PF00926.19 CTQ29989.1 - 4.8e-83 277.4 1.2 5.5e-83 277.2 1.2 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase BMFP PF04380.13 CTQ29990.1 - 1.1e-28 99.5 4.7 1.2e-28 99.3 4.7 1.0 1 0 0 1 1 1 1 Membrane fusogenic activity Sugarporin_N PF11471.8 CTQ29990.1 - 0.035 14.1 0.9 0.066 13.2 0.9 1.4 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension MobC PF05713.11 CTQ29990.1 - 0.085 13.3 0.2 2.6 8.6 0.0 2.3 2 1 0 2 2 2 0 Bacterial mobilisation protein (MobC) SlyX PF04102.12 CTQ29990.1 - 0.54 10.9 4.9 2.9 8.6 4.9 2.3 1 1 0 1 1 1 0 SlyX PfkB PF00294.24 CTQ29992.1 - 1.6e-55 188.5 0.2 5.4e-55 186.8 0.0 1.8 2 0 0 2 2 2 1 pfkB family carbohydrate kinase CTP_transf_like PF01467.26 CTQ29992.1 - 5.3e-15 55.9 0.0 9.9e-15 55.0 0.0 1.5 1 0 0 1 1 1 1 Cytidylyltransferase-like Phos_pyr_kin PF08543.12 CTQ29992.1 - 3e-07 30.1 0.0 8.5e-07 28.6 0.0 1.7 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 CTQ29992.1 - 1.2e-05 24.9 0.1 2.3e-05 24.0 0.1 1.5 1 0 0 1 1 1 1 Carbohydrate kinase Pantoate_ligase PF02569.15 CTQ29992.1 - 0.03 13.5 0.3 0.13 11.4 0.1 1.9 2 0 0 2 2 2 0 Pantoate-beta-alanine ligase FAD_syn PF06574.12 CTQ29992.1 - 0.035 14.0 0.0 0.13 12.1 0.0 1.9 2 0 0 2 2 2 0 FAD synthetase DUF4394 PF14339.6 CTQ29992.1 - 0.091 12.1 0.0 0.21 10.9 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) GlnE PF03710.15 CTQ29993.1 - 8.2e-199 657.7 7.1 3e-101 338.0 0.7 2.7 3 0 0 3 3 3 2 Glutamate-ammonia ligase adenylyltransferase GlnD_UR_UTase PF08335.11 CTQ29993.1 - 2.5e-59 199.6 10.9 7.2e-46 155.9 2.0 3.1 3 0 0 3 3 3 2 GlnD PII-uridylyltransferase CYTH PF01928.21 CTQ29994.1 - 1.9e-32 112.6 0.1 3.7e-32 111.7 0.1 1.5 1 0 0 1 1 1 1 CYTH domain SH3_3 PF08239.11 CTQ29995.1 - 4.8e-10 39.6 0.3 7.9e-10 38.9 0.3 1.3 1 0 0 1 1 1 1 Bacterial SH3 domain Cep57_MT_bd PF06657.13 CTQ29995.1 - 0.00044 20.6 0.7 0.0074 16.7 0.2 2.2 2 0 0 2 2 2 1 Centrosome microtubule-binding domain of Cep57 DUF948 PF06103.11 CTQ29995.1 - 0.00072 19.8 0.6 0.0015 18.8 0.6 1.5 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) SH3_4 PF06347.13 CTQ29995.1 - 0.0015 18.3 0.0 0.0034 17.2 0.0 1.6 1 1 0 1 1 1 1 Bacterial SH3 domain Ax_dynein_light PF10211.9 CTQ29995.1 - 0.0028 17.6 0.4 0.0045 17.0 0.4 1.3 1 0 0 1 1 1 1 Axonemal dynein light chain DUF4407 PF14362.6 CTQ29995.1 - 0.0045 16.4 0.3 0.0045 16.4 0.3 1.6 2 0 0 2 2 1 1 Domain of unknown function (DUF4407) TolA_bind_tri PF16331.5 CTQ29995.1 - 0.0087 16.1 1.5 0.015 15.3 1.5 1.4 1 0 0 1 1 1 1 TolA binding protein trimerisation DUF2408 PF10303.9 CTQ29995.1 - 0.0096 16.5 0.2 0.012 16.2 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2408) Seryl_tRNA_N PF02403.22 CTQ29995.1 - 0.01 16.0 5.0 0.019 15.2 5.0 1.4 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF3584 PF12128.8 CTQ29995.1 - 0.013 13.0 1.5 0.018 12.6 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) TPR_MLP1_2 PF07926.12 CTQ29995.1 - 0.016 15.3 5.7 0.017 15.2 1.9 2.1 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein HALZ PF02183.18 CTQ29995.1 - 0.017 15.3 1.1 0.54 10.5 0.2 2.3 2 0 0 2 2 2 0 Homeobox associated leucine zipper ADIP PF11559.8 CTQ29995.1 - 0.02 15.0 4.2 0.037 14.1 3.7 1.6 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF5082 PF16888.5 CTQ29995.1 - 0.021 15.1 2.9 0.18 12.1 1.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) GW PF13457.6 CTQ29995.1 - 0.021 15.4 1.0 0.07 13.7 0.0 2.2 2 1 0 2 2 2 0 GW (Gly-Tryp) dipeptide domain Prefoldin_2 PF01920.20 CTQ29995.1 - 0.025 14.5 2.1 0.8 9.7 0.0 2.3 1 1 1 2 2 2 0 Prefoldin subunit dCache_3 PF14827.6 CTQ29995.1 - 0.026 14.2 0.2 0.076 12.7 0.1 1.7 2 0 0 2 2 2 0 Double sensory domain of two-component sensor kinase CEP63 PF17045.5 CTQ29995.1 - 0.031 14.2 1.0 0.045 13.7 1.0 1.1 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa Prominin PF05478.11 CTQ29995.1 - 0.045 11.7 2.6 0.054 11.5 2.6 1.0 1 0 0 1 1 1 0 Prominin GAS PF13851.6 CTQ29995.1 - 0.048 13.0 5.1 0.076 12.3 4.6 1.5 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding FlaC_arch PF05377.11 CTQ29995.1 - 0.061 13.7 2.0 1.4 9.4 0.4 2.4 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) UPF0242 PF06785.11 CTQ29995.1 - 0.077 13.1 1.9 0.11 12.5 1.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Phlebovirus_NSM PF07246.11 CTQ29995.1 - 0.089 12.2 3.5 0.46 9.8 3.4 1.8 1 1 0 1 1 1 0 Phlebovirus nonstructural protein NS-M BAR PF03114.18 CTQ29995.1 - 0.11 12.1 2.4 0.16 11.6 2.4 1.1 1 0 0 1 1 1 0 BAR domain TMF_DNA_bd PF12329.8 CTQ29995.1 - 0.13 12.3 4.7 2.1 8.4 2.2 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding LPP PF04728.13 CTQ29995.1 - 0.13 12.7 5.5 0.87 10.0 0.1 2.5 2 0 0 2 2 2 0 Lipoprotein leucine-zipper Swi5 PF07061.11 CTQ29995.1 - 0.18 11.9 2.0 14 5.8 0.0 2.3 2 0 0 2 2 2 0 Swi5 TnpV PF14198.6 CTQ29995.1 - 0.18 11.8 1.4 0.31 11.0 1.4 1.4 1 0 0 1 1 1 0 Transposon-encoded protein TnpV DUF5320 PF17253.2 CTQ29995.1 - 0.31 12.1 1.0 16 6.6 0.0 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DivIVA PF05103.13 CTQ29995.1 - 0.43 10.7 5.1 3.3 7.8 5.7 1.9 1 1 1 2 2 2 0 DivIVA protein DUF1664 PF07889.12 CTQ29995.1 - 0.53 10.3 4.2 0.79 9.8 4.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 CTQ29995.1 - 0.55 10.4 4.7 0.86 9.8 4.7 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family PRKG1_interact PF15898.5 CTQ29995.1 - 0.56 11.1 5.4 3.7 8.5 2.7 2.3 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain GIT_CC PF16559.5 CTQ29995.1 - 0.56 10.1 4.9 0.58 10.1 3.5 1.8 2 0 0 2 2 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor FlxA PF14282.6 CTQ29995.1 - 0.62 10.1 6.7 7.9 6.5 6.3 2.3 1 1 0 1 1 1 0 FlxA-like protein PolyA_pol PF01743.20 CTQ29996.1 - 8.8e-19 68.2 0.0 2.9e-18 66.5 0.0 1.9 1 1 0 1 1 1 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 CTQ29996.1 - 3.7e-15 55.4 0.1 8.9e-15 54.2 0.1 1.6 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A HD PF01966.22 CTQ29996.1 - 6.6e-12 45.7 1.6 2.7e-11 43.7 0.1 2.2 2 0 0 2 2 2 1 HD domain BacA PF02673.18 CTQ29997.1 - 3.1e-87 292.5 17.2 3.6e-87 292.3 17.2 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA FeoB_C PF07664.12 CTQ29997.1 - 6.3 6.6 12.5 2.1 8.1 2.0 3.5 3 0 0 3 3 3 0 Ferrous iron transport protein B C terminus FolB PF02152.18 CTQ29998.1 - 5.3e-32 110.7 0.4 6e-32 110.5 0.4 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase G3P_acyltransf PF02660.15 CTQ29999.1 - 4e-49 166.8 9.2 4.6e-49 166.6 9.2 1.0 1 0 0 1 1 1 1 Glycerol-3-phosphate acyltransferase UreD PF01774.17 CTQ30001.1 - 6.1e-45 153.8 0.0 7.6e-45 153.4 0.0 1.1 1 0 0 1 1 1 1 UreD urease accessory protein Urease_gamma PF00547.18 CTQ30002.1 - 6.1e-47 158.0 0.1 6.7e-47 157.8 0.1 1.0 1 0 0 1 1 1 1 Urease, gamma subunit Urease_beta PF00699.20 CTQ30003.1 - 1.7e-45 153.0 0.1 1.9e-45 152.9 0.1 1.0 1 0 0 1 1 1 1 Urease beta subunit Amidohydro_1 PF01979.20 CTQ30004.1 - 1.6e-84 284.2 1.3 2e-84 283.9 1.3 1.1 1 0 0 1 1 1 1 Amidohydrolase family Urease_alpha PF00449.20 CTQ30004.1 - 4.1e-56 188.5 1.4 7.9e-56 187.6 1.4 1.5 1 0 0 1 1 1 1 Urease alpha-subunit, N-terminal domain Amidohydro_3 PF07969.11 CTQ30004.1 - 4.8e-15 56.0 0.9 6.6e-08 32.4 0.0 2.7 2 1 0 2 2 2 2 Amidohydrolase family Molybdopterin_N PF18364.1 CTQ30004.1 - 0.04 13.9 0.1 1.1 9.3 0.1 3.1 3 0 0 3 3 3 0 Molybdopterin oxidoreductase N-terminal domain UreE_C PF05194.12 CTQ30005.1 - 3.9e-30 104.2 8.2 5.2e-30 103.8 8.2 1.2 1 0 0 1 1 1 1 UreE urease accessory protein, C-terminal domain UreE_N PF02814.15 CTQ30005.1 - 2.8e-13 49.3 0.2 4.5e-13 48.6 0.2 1.3 1 0 0 1 1 1 1 UreE urease accessory protein, N-terminal domain UreF PF01730.16 CTQ30006.1 - 1.1e-32 113.4 2.7 1.1e-32 113.4 2.7 1.7 2 0 0 2 2 2 1 UreF cobW PF02492.19 CTQ30007.1 - 2.7e-40 137.9 0.0 3.1e-40 137.6 0.0 1.0 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 CTQ30007.1 - 0.00017 20.7 0.0 0.22 10.5 0.0 2.0 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 CTQ30007.1 - 0.0074 16.4 0.0 0.016 15.3 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase Zeta_toxin PF06414.12 CTQ30007.1 - 0.01 15.1 0.0 0.015 14.5 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 CTQ30007.1 - 0.012 16.0 0.0 0.016 15.6 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 CTQ30007.1 - 0.019 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 CTQ30007.1 - 0.031 14.8 0.0 0.11 12.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain GTP_EFTU PF00009.27 CTQ30007.1 - 0.034 13.7 0.1 1.2 8.7 0.0 2.6 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain KAP_NTPase PF07693.14 CTQ30007.1 - 0.058 12.6 0.0 0.058 12.6 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain AAA_18 PF13238.6 CTQ30007.1 - 0.064 13.8 0.0 0.11 13.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 CTQ30007.1 - 0.085 13.4 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter MobB PF03205.14 CTQ30007.1 - 0.097 12.6 0.1 0.54 10.2 0.1 2.0 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 CTQ30007.1 - 0.1 13.0 0.0 0.18 12.2 0.0 1.7 1 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.6 CTQ30007.1 - 0.15 11.8 0.0 0.31 10.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system ORF_12_N PF18042.1 CTQ30007.1 - 0.16 12.4 0.0 0.35 11.3 0.0 1.5 1 0 0 1 1 1 0 ORF 12 gene product N-terminal Transp_cyt_pur PF02133.15 CTQ30008.1 - 1.7e-09 37.0 43.7 6.1e-09 35.2 43.7 1.8 1 1 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin La_HTH_kDCL PF18177.1 CTQ30008.1 - 0.17 12.2 0.0 0.34 11.2 0.0 1.5 1 0 0 1 1 1 0 La HTH in kinetoplastid DICER domain Zn_ribbon_SprT PF17283.2 CTQ30008.1 - 0.25 11.3 1.2 0.43 10.5 1.2 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Peptidase_M22 PF00814.25 CTQ30009.1 - 6.9e-104 347.3 0.0 7.9e-104 347.1 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 CTQ30009.1 - 2.4e-07 30.7 0.0 0.00014 21.6 0.0 2.1 2 0 0 2 2 2 2 Carbamoyltransferase N-terminus BcrAD_BadFG PF01869.20 CTQ30009.1 - 0.0006 19.4 0.0 0.0029 17.1 0.0 1.9 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family TrwC PF08751.11 CTQ30009.1 - 0.16 11.4 0.0 0.31 10.5 0.0 1.4 1 1 0 1 1 1 0 TrwC relaxase Ribosomal_S21 PF01165.20 CTQ30010.1 - 6e-22 77.1 6.5 6e-22 77.1 6.5 1.9 1 1 1 2 2 2 1 Ribosomal protein S21 Toprim_N PF08275.11 CTQ30011.1 - 4.8e-43 146.3 0.0 7.7e-43 145.6 0.0 1.3 1 0 0 1 1 1 1 DNA primase catalytic core, N-terminal domain zf-CHC2 PF01807.20 CTQ30011.1 - 3.8e-41 138.9 0.1 7e-41 138.0 0.1 1.4 1 0 0 1 1 1 1 CHC2 zinc finger DnaG_DnaB_bind PF08278.11 CTQ30011.1 - 4.3e-32 111.3 0.2 4.3e-32 111.3 0.2 1.9 3 0 0 3 3 3 1 DNA primase DnaG DnaB-binding Toprim_2 PF13155.6 CTQ30011.1 - 3e-14 53.2 0.0 7e-14 52.0 0.0 1.7 1 0 0 1 1 1 1 Toprim-like Toprim_4 PF13662.6 CTQ30011.1 - 1.5e-13 51.0 0.0 3.8e-13 49.7 0.0 1.6 1 0 0 1 1 1 1 Toprim domain DnaB_bind PF10410.9 CTQ30011.1 - 1.9e-12 47.2 0.0 6.5e-12 45.5 0.0 2.0 2 0 0 2 2 2 1 DnaB-helicase binding domain of primase Toprim PF01751.22 CTQ30011.1 - 1.5e-09 38.0 0.0 2.8e-09 37.1 0.0 1.5 1 0 0 1 1 1 1 Toprim domain Toprim_3 PF13362.6 CTQ30011.1 - 1.1e-07 32.1 0.0 2.1e-07 31.2 0.0 1.5 1 0 0 1 1 1 1 Toprim domain Sigma70_ner PF04546.13 CTQ30012.1 - 8.8e-75 251.1 9.3 8.8e-75 251.1 9.3 2.8 3 0 0 3 3 3 1 Sigma-70, non-essential region Sigma70_r1_1 PF03979.14 CTQ30012.1 - 6.6e-30 103.0 5.1 6.6e-30 103.0 5.1 2.9 2 0 0 2 2 2 1 Sigma-70 factor, region 1.1 Sigma70_r3 PF04539.16 CTQ30012.1 - 3.8e-29 100.6 1.0 3.8e-29 100.6 1.0 3.9 4 0 0 4 4 3 1 Sigma-70 region 3 Sigma70_r2 PF04542.14 CTQ30012.1 - 6.8e-22 77.0 0.3 1.8e-21 75.7 0.3 1.8 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 CTQ30012.1 - 1e-18 66.6 0.8 1e-18 66.6 0.8 3.5 3 0 0 3 3 3 1 Sigma-70, region 4 Sigma70_r1_2 PF00140.20 CTQ30012.1 - 2.2e-13 50.0 0.3 1.8e-12 47.0 0.1 2.6 2 0 0 2 2 2 1 Sigma-70 factor, region 1.2 HTH_25 PF13413.6 CTQ30012.1 - 0.36 10.7 3.4 30 4.6 0.0 3.7 3 0 0 3 3 3 0 Helix-turn-helix domain Sun2_CC2 PF18580.1 CTQ30012.1 - 0.48 10.7 5.0 2.4 8.4 0.3 3.2 3 0 0 3 3 3 0 SUN2 coiled coil domain 2 CENP-B_dimeris PF09026.10 CTQ30012.1 - 1.6 9.2 14.6 0.053 13.9 7.9 2.0 2 0 0 2 2 1 0 Centromere protein B dimerisation domain Cwf_Cwc_15 PF04889.12 CTQ30012.1 - 3.1 7.5 12.4 0.06 13.1 5.5 1.7 2 0 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein FlgN PF05130.12 CTQ30012.1 - 9.1 6.8 11.5 2.3 8.7 0.5 4.0 4 1 0 4 4 4 0 FlgN protein UDG PF03167.19 CTQ30013.1 - 1.9e-24 86.4 0.0 2.2e-24 86.2 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Phage_GPD PF05954.11 CTQ30016.1 - 4.1e-43 147.8 0.1 5.1e-43 147.5 0.1 1.1 1 0 0 1 1 1 1 Phage late control gene D protein (GPD) GCV_T PF01571.21 CTQ30016.1 - 0.087 12.2 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Aminomethyltransferase folate-binding domain Phage_P2_GpU PF06995.11 CTQ30017.1 - 6.9e-43 145.1 0.0 8.2e-43 144.8 0.0 1.1 1 0 0 1 1 1 1 Phage P2 GpU PhageMin_Tail PF10145.9 CTQ30018.1 - 4.9e-37 127.7 22.0 4.9e-37 127.7 22.0 5.4 3 2 0 4 4 3 1 Phage-related minor tail protein Rotamase_2 PF13145.6 CTQ30018.1 - 0.02 15.8 2.0 0.02 15.8 2.0 4.4 4 1 0 4 4 2 0 PPIC-type PPIASE domain DUF2207 PF09972.9 CTQ30018.1 - 0.02 13.7 0.2 0.042 12.6 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1418 PF07214.12 CTQ30018.1 - 0.15 11.9 0.3 0.37 10.7 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) DUF21 PF01595.20 CTQ30018.1 - 0.26 11.0 4.2 0.73 9.5 4.2 1.8 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain SecD-TM1 PF13721.6 CTQ30018.1 - 2.7 8.5 10.5 11 6.5 1.9 3.4 2 1 1 3 3 3 0 SecD export protein N-terminal TM region Cluap1 PF10234.9 CTQ30018.1 - 2.8 7.3 14.4 6.8 6.0 14.4 1.6 1 0 0 1 1 1 0 Clusterin-associated protein-1 Lectin_N PF03954.14 CTQ30018.1 - 2.8 7.7 6.4 3 7.6 3.6 2.4 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Fez1 PF06818.15 CTQ30018.1 - 3.6 8.0 18.4 2.6 8.4 14.3 2.7 3 0 0 3 3 3 0 Fez1 DUF4763 PF15960.5 CTQ30018.1 - 5.5 6.2 11.6 18 4.6 11.7 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4763) DUF4201 PF13870.6 CTQ30018.1 - 6.7 6.4 15.4 12 5.5 6.0 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) Phage_P2_GpE PF06528.12 CTQ30019.1 - 2.1e-23 81.5 0.0 2.3e-23 81.4 0.0 1.0 1 0 0 1 1 1 1 Phage P2 GpE Phage_TAC_7 PF10109.9 CTQ30020.1 - 5.2e-10 39.3 0.1 5.8e-10 39.2 0.1 1.0 1 0 0 1 1 1 1 Phage tail assembly chaperone proteins, E, or 41 or 14 Phage_tube PF04985.14 CTQ30021.1 - 1.2e-61 207.2 0.0 1.4e-61 207.1 0.0 1.0 1 0 0 1 1 1 1 Phage tail tube protein FII Phage_sheath_1 PF04984.14 CTQ30022.1 - 1.5e-33 116.1 0.9 2.3e-33 115.4 0.1 1.8 2 0 0 2 2 2 1 Phage tail sheath protein subtilisin-like domain Phage_sheath_1C PF17482.2 CTQ30022.1 - 6.2e-18 64.7 0.0 9.8e-18 64.1 0.0 1.3 1 0 0 1 1 1 1 Phage tail sheath C-terminal domain DUF3751 PF12571.8 CTQ30023.1 - 6.3e-48 162.7 0.0 1.1e-47 161.8 0.0 1.4 1 0 0 1 1 1 1 Phage tail-collar fibre protein Phage_fiber_2 PF03406.13 CTQ30023.1 - 4e-14 51.9 0.0 7.3e-14 51.0 0.0 1.5 1 0 0 1 1 1 1 Phage tail fibre repeat End_beta_barrel PF12195.8 CTQ30024.1 - 0.00023 21.0 0.2 0.00085 19.2 0.2 2.0 1 0 0 1 1 1 1 Beta barrel domain of bacteriophage endosialidase Tail_P2_I PF09684.10 CTQ30025.1 - 7.5e-45 152.2 1.2 9.6e-45 151.8 1.2 1.1 1 0 0 1 1 1 1 Phage tail protein (Tail_P2_I) Coatomer_g_Cpla PF16381.5 CTQ30025.1 - 0.038 14.1 0.1 0.064 13.4 0.1 1.3 1 0 0 1 1 1 0 Coatomer subunit gamma-1 C-terminal appendage platform Baseplate_J PF04865.14 CTQ30026.1 - 4.5e-26 91.5 1.8 5.6e-26 91.2 0.5 1.8 2 0 0 2 2 2 1 Baseplate J-like protein GPW_gp25 PF04965.14 CTQ30027.1 - 2.1e-15 56.3 0.0 2.4e-15 56.1 0.0 1.1 1 0 0 1 1 1 1 Gene 25-like lysozyme Phage_base_V PF04717.12 CTQ30028.1 - 2.8e-46 156.0 0.1 5.4e-46 155.1 0.0 1.5 2 0 0 2 2 2 1 Type VI secretion system, phage-baseplate injector Phage_spike PF18715.1 CTQ30028.1 - 5e-25 87.3 6.3 2.1e-24 85.3 1.5 2.6 1 1 1 2 2 2 2 Phage spike trimer Phage_tail_S PF05069.13 CTQ30029.1 - 1.6e-38 131.9 1.3 1.7e-38 131.7 1.3 1.0 1 0 0 1 1 1 1 Phage virion morphogenesis family P2_Phage_GpR PF06891.11 CTQ30030.1 - 3.6e-42 143.5 0.0 4.2e-42 143.3 0.0 1.0 1 0 0 1 1 1 1 P2 phage tail completion protein R (GpR) MSC PF09402.10 CTQ30032.1 - 0.023 14.2 0.9 0.028 13.9 0.9 1.1 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain Phage_lysozyme PF00959.19 CTQ30033.1 - 1.3e-19 70.6 0.0 1.7e-19 70.3 0.0 1.1 1 0 0 1 1 1 1 Phage lysozyme Phage_holin_3_2 PF04550.12 CTQ30034.1 - 1e-40 138.2 4.1 1.1e-40 138.0 4.1 1.0 1 0 0 1 1 1 1 Phage holin family 2 Phage_tail_X PF05489.12 CTQ30035.1 - 1.3e-28 98.4 0.1 1.5e-28 98.3 0.1 1.0 1 0 0 1 1 1 1 Phage Tail Protein X Phage_GPL PF05926.11 CTQ30036.1 - 1.6e-50 170.7 0.0 1.8e-50 170.5 0.0 1.0 1 0 0 1 1 1 1 Phage head completion protein (GPL) Phage_term_smal PF05944.12 CTQ30037.1 - 1.1e-39 135.4 0.0 1.7e-39 134.8 0.0 1.3 1 0 0 1 1 1 1 Phage small terminase subunit TPR_2 PF07719.17 CTQ30037.1 - 0.019 15.1 0.1 0.038 14.1 0.1 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 CTQ30037.1 - 0.13 12.1 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Phage_cap_P2 PF05125.12 CTQ30038.1 - 8.9e-144 478.4 1.7 1e-143 478.3 1.7 1.0 1 0 0 1 1 1 1 Phage major capsid protein, P2 family Phage_GPO PF05929.11 CTQ30039.1 - 4.3e-106 354.5 0.2 4.9e-106 354.3 0.2 1.0 1 0 0 1 1 1 1 Phage capsid scaffolding protein (GPO) serine peptidase COG5 PF10392.9 CTQ30039.1 - 0.012 15.8 0.9 0.025 14.7 0.9 1.5 1 0 0 1 1 1 0 Golgi transport complex subunit 5 Apolipoprotein PF01442.18 CTQ30039.1 - 0.018 14.9 5.0 0.03 14.2 5.0 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 CTQ30039.1 - 0.018 15.0 5.3 0.083 12.9 4.8 2.0 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Rab5-bind PF09311.11 CTQ30039.1 - 0.033 13.6 2.1 0.05 13.0 2.1 1.2 1 0 0 1 1 1 0 Rabaptin-like protein Cep57_CLD PF14073.6 CTQ30039.1 - 0.036 14.1 5.4 0.055 13.5 5.4 1.2 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 PIN_8 PF18476.1 CTQ30039.1 - 0.094 12.6 1.6 0.14 12.0 1.6 1.2 1 0 0 1 1 1 0 PIN like domain ABC_tran_CTD PF16326.5 CTQ30039.1 - 0.34 11.2 2.3 0.63 10.3 1.1 2.0 1 1 1 2 2 2 0 ABC transporter C-terminal domain TORC_N PF12884.7 CTQ30039.1 - 1 10.2 4.0 1.1 10.1 0.7 2.1 1 1 1 2 2 2 0 Transducer of regulated CREB activity, N terminus Terminase_6 PF03237.15 CTQ30040.1 - 3.2e-57 193.6 0.0 6.1e-57 192.7 0.0 1.5 1 0 0 1 1 1 1 Terminase-like family Terminase_6C PF17289.2 CTQ30040.1 - 2.6e-41 141.3 0.1 1.4e-40 138.9 0.0 2.2 2 0 0 2 2 2 1 Terminase RNaseH-like domain Terminase_5 PF06056.12 CTQ30040.1 - 3e-25 87.9 1.3 3.7e-25 87.6 0.3 1.7 2 0 0 2 2 2 1 Putative ATPase subunit of terminase (gpP-like) HTH_23 PF13384.6 CTQ30040.1 - 4.7e-06 26.2 0.0 1.2e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 CTQ30040.1 - 1.7e-05 24.8 0.9 5.9e-05 23.1 0.2 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.6 CTQ30040.1 - 6.2e-05 22.9 0.0 0.00013 21.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix Sigma70_r4_2 PF08281.12 CTQ30040.1 - 0.00012 21.6 0.0 0.00044 19.9 0.0 2.0 1 0 0 1 1 1 1 Sigma-70, region 4 Phage_terminase PF10668.9 CTQ30040.1 - 0.002 18.1 0.0 0.0041 17.1 0.0 1.5 1 0 0 1 1 1 1 Phage terminase small subunit Phage_portal PF04860.12 CTQ30041.1 - 6.4e-11 42.0 0.0 9.1e-11 41.5 0.0 1.1 1 0 0 1 1 1 1 Phage portal protein Ribosomal_L9_N PF01281.19 CTQ30041.1 - 0.054 13.1 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L9, N-terminal domain MethyltransfD12 PF02086.15 CTQ30042.1 - 6.7e-17 62.0 1.9 1.4e-16 61.0 1.9 1.4 1 1 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase ParBc PF02195.18 CTQ30043.1 - 0.013 15.8 0.0 0.026 14.8 0.0 1.5 1 0 0 1 1 1 0 ParB-like nuclease domain DinI PF06183.13 CTQ30044.1 - 2.7e-20 72.4 1.4 2.1e-19 69.6 0.2 2.2 2 0 0 2 2 2 1 DinI-like family Phage_GPA PF05840.13 CTQ30045.1 - 5e-129 430.0 0.1 6.7e-129 429.5 0.1 1.2 1 0 0 1 1 1 1 Bacteriophage replication gene A protein (GPA) DUF3850 PF12961.7 CTQ30046.1 - 1.3e-20 73.2 0.0 1.9e-20 72.6 0.0 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF3850) ASCH PF04266.14 CTQ30046.1 - 0.0036 17.9 0.0 0.0038 17.8 0.0 1.2 1 0 0 1 1 1 1 ASCH domain DUF5405 PF17399.2 CTQ30047.1 - 1.4e-15 57.3 0.0 1.5e-15 57.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5405) SeqA_N PF17206.3 CTQ30047.1 - 0.14 11.5 0.6 12 5.3 0.1 2.4 2 0 0 2 2 2 0 SeqA protein N-terminal domain RNase_T PF00929.24 CTQ30048.1 - 4.3e-18 66.4 0.0 5.4e-18 66.1 0.0 1.1 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 CTQ30048.1 - 2.2e-05 24.5 0.6 9.7e-05 22.4 0.6 2.0 1 1 0 1 1 1 1 3' exoribonuclease, RNase T-like zf-dskA_traR PF01258.17 CTQ30049.1 - 6.7e-09 35.5 5.2 6.7e-09 35.5 5.2 1.7 2 0 0 2 2 2 1 Prokaryotic dksA/traR C4-type zinc finger DZR PF12773.7 CTQ30049.1 - 0.0032 17.5 0.4 0.0043 17.0 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon Auto_anti-p27 PF06677.12 CTQ30049.1 - 0.045 13.9 0.9 0.064 13.4 0.9 1.2 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) LIM PF00412.22 CTQ30049.1 - 0.051 13.8 0.1 0.072 13.3 0.1 1.4 1 1 0 1 1 1 0 LIM domain ArfGap PF01412.18 CTQ30049.1 - 0.069 13.2 0.3 0.092 12.8 0.2 1.3 1 1 0 1 1 1 0 Putative GTPase activating protein for Arf zf_UBZ PF18439.1 CTQ30049.1 - 0.073 12.7 0.3 0.073 12.7 0.3 2.1 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger DUF2732 PF10809.8 CTQ30050.1 - 9.9e-24 83.0 4.6 1.1e-23 82.8 4.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2732) DUF2724 PF10893.8 CTQ30052.1 - 9.7e-24 83.0 0.2 1.1e-23 82.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2724) Phage_CP76 PF06892.11 CTQ30053.1 - 6.5e-69 230.4 0.2 7.3e-69 230.3 0.2 1.0 1 0 0 1 1 1 1 Phage regulatory protein CII (CP76) IF2_N PF04760.15 CTQ30053.1 - 0.14 12.0 0.0 1.1 9.2 0.0 2.2 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HTH_17 PF12728.7 CTQ30054.1 - 0.088 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain MerR_2 PF13591.6 CTQ30054.1 - 0.17 11.8 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 MerR HTH family regulatory protein Phage_CI_C PF16452.5 CTQ30055.1 - 5.6e-33 113.3 0.0 7.7e-33 112.8 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage CI repressor C-terminal domain Phage_CI_repr PF07022.13 CTQ30055.1 - 1.5e-24 85.8 0.0 3.2e-24 84.8 0.0 1.5 2 0 0 2 2 2 1 Bacteriophage CI repressor helix-turn-helix domain Phage_integrase PF00589.22 CTQ30056.1 - 7.6e-26 90.9 0.2 2.8e-13 50.0 0.0 2.5 2 0 0 2 2 2 2 Phage integrase family SelB-wing_3 PF09107.11 CTQ30056.1 - 0.13 11.9 0.2 0.3 10.8 0.2 1.6 1 0 0 1 1 1 0 Elongation factor SelB, winged helix HdeA PF06411.11 CTQ30060.1 - 3.4e-08 33.5 0.0 3.8e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 HdeA/HdeB family SSXRD PF09514.10 CTQ30060.1 - 0.13 11.9 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 SSXRD motif Response_reg PF00072.24 CTQ30061.1 - 1.3e-27 96.2 0.1 1.8e-27 95.7 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 CTQ30061.1 - 6.5e-14 51.2 0.0 1.1e-13 50.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 CTQ30061.1 - 0.0022 17.6 0.0 0.0044 16.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 CTQ30061.1 - 0.0038 16.7 0.0 0.0078 15.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 SBP_bac_3 PF00497.20 CTQ30062.1 - 3.9e-35 121.3 0.0 3.7e-17 62.5 0.0 2.8 3 0 0 3 3 3 2 Bacterial extracellular solute-binding proteins, family 3 HATPase_c PF02518.26 CTQ30062.1 - 1.6e-26 93.0 0.0 3.8e-26 91.8 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 CTQ30062.1 - 1.3e-25 89.7 0.1 1.5e-24 86.3 0.0 3.0 4 0 0 4 4 4 1 Response regulator receiver domain HisKA PF00512.25 CTQ30062.1 - 9.4e-15 54.4 0.1 9.4e-15 54.4 0.1 4.1 3 1 0 3 3 3 1 His Kinase A (phospho-acceptor) domain Hpt PF01627.23 CTQ30062.1 - 5e-10 39.5 0.7 5e-10 39.5 0.7 2.8 2 0 0 2 2 2 1 Hpt domain TMEM51 PF15345.6 CTQ30062.1 - 0.12 12.2 0.1 0.25 11.2 0.1 1.4 1 0 0 1 1 1 0 Transmembrane protein 51 YfdX PF10938.8 CTQ30063.1 - 3.6e-47 160.0 7.3 3.6e-47 160.0 7.3 1.9 2 0 0 2 2 2 1 YfdX protein TarH PF02203.15 CTQ30063.1 - 0.094 12.6 10.8 0.073 13.0 5.2 2.7 2 1 1 3 3 3 0 Tar ligand binding domain homologue Reductase_C PF14759.6 CTQ30063.1 - 0.11 13.1 1.9 0.22 12.1 0.9 2.1 2 0 0 2 2 2 0 Reductase C-terminal DUF308 PF03729.13 CTQ30064.1 - 1.4e-20 73.3 29.2 2.5e-10 40.5 13.2 3.1 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) 7TMR-DISM_7TM PF07695.11 CTQ30064.1 - 0.17 11.7 28.3 0.16 11.8 20.0 2.1 1 1 0 2 2 2 0 7TM diverse intracellular signalling DUF2070 PF09843.9 CTQ30064.1 - 0.29 9.4 11.5 0.027 12.8 6.5 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) DUF3040 PF11239.8 CTQ30064.1 - 7.5 6.9 17.2 0.4 11.0 1.3 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3040) YfhO PF09586.10 CTQ30064.1 - 7.8 4.6 13.4 9.6 4.3 13.4 1.2 1 0 0 1 1 1 0 Bacterial membrane protein YfhO HdeA PF06411.11 CTQ30065.1 - 2.8e-23 81.9 0.7 3.1e-23 81.7 0.7 1.0 1 0 0 1 1 1 1 HdeA/HdeB family ZF-HD_dimer PF04770.12 CTQ30065.1 - 0.11 12.9 0.1 2.9 8.3 0.0 2.3 2 0 0 2 2 2 0 ZF-HD protein dimerisation region CmlA_N PF18456.1 CTQ30065.1 - 0.11 11.8 0.0 0.17 11.2 0.0 1.3 1 1 1 2 2 2 0 Diiron non-heme beta-hydroxylase N-terminal domain MIP PF00230.20 CTQ30066.1 - 8.2e-69 231.8 14.9 9.2e-69 231.6 14.9 1.0 1 0 0 1 1 1 1 Major intrinsic protein TauE PF01925.19 CTQ30066.1 - 0.35 10.5 33.6 2.8 7.5 20.4 3.2 1 1 1 2 2 2 0 Sulfite exporter TauE/SafE DDR PF08841.10 CTQ30067.1 - 2.1e-155 516.7 7.4 3.6e-155 515.9 7.4 1.4 1 0 0 1 1 1 1 Diol dehydratase reactivase ATPase-like domain DDR_swiveling PF18427.1 CTQ30067.1 - 4.7e-71 238.0 0.4 1e-70 236.9 0.4 1.6 1 0 0 1 1 1 1 DD-reactivating factor swiveling domain BcrAD_BadFG PF01869.20 CTQ30067.1 - 0.00034 20.2 0.5 0.27 10.7 0.2 2.5 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.6 CTQ30067.1 - 0.0046 17.4 3.7 2 8.9 0.3 3.0 3 0 0 3 3 3 2 Cell division protein FtsA Ppx-GppA PF02541.16 CTQ30067.1 - 0.007 15.8 0.7 0.1 12.0 0.1 2.2 2 0 0 2 2 2 1 Ppx/GppA phosphatase family Methyltransf_17 PF12692.7 CTQ30067.1 - 0.063 13.3 0.2 0.17 11.9 0.2 1.7 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase Dehydratase_SU PF02287.15 CTQ30068.1 - 8.6e-60 200.6 0.3 9.8e-60 200.4 0.3 1.0 1 0 0 1 1 1 1 Dehydratase small subunit HTH_Tnp_ISL3 PF13542.6 CTQ30068.1 - 0.016 14.6 0.3 0.035 13.5 0.3 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Dehydratase_MU PF02288.15 CTQ30069.1 - 4.7e-36 123.0 0.0 7.5e-36 122.3 0.0 1.3 1 0 0 1 1 1 1 Dehydratase medium subunit Dehydratase_LU PF02286.15 CTQ30070.1 - 0 1034.8 3.2 0 1034.6 3.2 1.0 1 0 0 1 1 1 1 Dehydratase large subunit Haem_degrading PF03928.14 CTQ30071.1 - 5.2e-30 104.0 0.8 5.8e-30 103.8 0.8 1.0 1 0 0 1 1 1 1 Haem-degrading Diacid_rec PF05651.13 CTQ30071.1 - 0.032 13.9 1.1 0.039 13.6 0.2 1.7 2 0 0 2 2 2 0 Putative sugar diacid recognition DUF4715 PF15835.5 CTQ30071.1 - 0.14 12.2 0.0 0.25 11.4 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4715) Fe-ADH PF00465.19 CTQ30072.1 - 2.6e-128 427.9 2.4 3e-128 427.7 2.4 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ30072.1 - 6.7e-18 65.3 2.1 5.2e-16 59.1 2.1 2.1 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Hydrolase PF00702.26 CTQ30072.1 - 0.00054 20.3 0.1 0.027 14.8 0.0 2.4 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Lamprin PF06403.11 CTQ30072.1 - 0.075 13.0 0.5 0.075 13.0 0.5 1.8 2 0 0 2 2 2 0 Lamprin Dehydratase_MU PF02288.15 CTQ30073.1 - 1.9e-24 85.6 0.0 2e-24 85.5 0.0 1.0 1 0 0 1 1 1 1 Dehydratase medium subunit Cob_adeno_trans PF01923.18 CTQ30074.1 - 6.5e-50 169.5 0.5 7.3e-50 169.3 0.5 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Sigma54_activat PF00158.26 CTQ30075.1 - 3.8e-36 124.3 0.1 8.4e-36 123.2 0.0 1.6 2 0 0 2 2 2 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 CTQ30075.1 - 1.9e-18 66.9 0.0 5e-18 65.6 0.0 1.7 1 0 0 1 1 1 1 Sigma-54 interaction domain PAS PF00989.25 CTQ30075.1 - 4.6e-15 55.6 0.1 2.2e-14 53.4 0.0 2.2 3 0 0 3 3 3 1 PAS fold HTH_8 PF02954.19 CTQ30075.1 - 4.8e-13 48.7 0.1 4.8e-13 48.7 0.1 2.2 3 0 0 3 3 2 1 Bacterial regulatory protein, Fis family GAF PF01590.26 CTQ30075.1 - 1.2e-06 29.1 0.2 1.4e-05 25.7 0.1 2.6 3 0 0 3 3 2 1 GAF domain PAS_4 PF08448.10 CTQ30075.1 - 3.8e-06 27.1 0.0 0.028 14.7 0.0 2.8 2 0 0 2 2 2 2 PAS fold AAA_5 PF07728.14 CTQ30075.1 - 0.00049 20.1 0.0 0.0013 18.7 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 CTQ30075.1 - 0.006 16.7 0.0 0.014 15.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) HTH_50 PF18024.1 CTQ30075.1 - 0.015 14.9 0.0 0.037 13.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain AAA_7 PF12775.7 CTQ30075.1 - 0.02 14.4 0.0 0.046 13.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_16 PF13191.6 CTQ30075.1 - 0.027 14.9 0.6 0.1 13.0 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA PF00004.29 CTQ30075.1 - 0.042 14.3 0.0 0.11 12.9 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PAS_8 PF13188.7 CTQ30075.1 - 0.063 13.3 0.1 0.16 12.0 0.1 1.7 1 0 0 1 1 1 0 PAS domain PAS_9 PF13426.7 CTQ30075.1 - 0.087 13.1 0.0 0.77 10.0 0.0 2.4 2 0 0 2 2 2 0 PAS domain PAS_7 PF12860.7 CTQ30075.1 - 0.098 12.8 0.1 0.25 11.5 0.1 1.8 1 0 0 1 1 1 0 PAS fold HTH_17 PF12728.7 CTQ30075.1 - 0.15 12.3 0.0 0.45 10.7 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Fe-ADH PF00465.19 CTQ30076.1 - 8.5e-68 228.8 4.1 9.7e-68 228.6 4.1 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ30076.1 - 9.8e-35 120.4 0.4 1.4e-34 120.0 0.4 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase PFK PF00365.20 CTQ30076.1 - 0.0012 18.2 0.1 0.007 15.7 0.0 2.0 2 0 0 2 2 2 1 Phosphofructokinase FAD_binding_4 PF01565.23 CTQ30076.1 - 0.032 14.0 0.1 0.74 9.5 0.0 2.9 4 0 0 4 4 4 0 FAD binding domain RibD_C PF01872.17 CTQ30076.1 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 RibD C-terminal domain Dak1 PF02733.17 CTQ30078.1 - 1.3e-126 421.8 0.0 1.5e-126 421.5 0.0 1.0 1 0 0 1 1 1 1 Dak1 domain Dak2 PF02734.17 CTQ30079.1 - 1.4e-54 184.6 0.4 1.7e-54 184.3 0.4 1.0 1 0 0 1 1 1 1 DAK2 domain EIIA-man PF03610.16 CTQ30080.1 - 5.5e-25 87.9 0.6 1.2e-24 86.7 0.6 1.6 1 0 0 1 1 1 1 PTS system fructose IIA component PEP-utilisers_N PF05524.13 CTQ30080.1 - 2.7e-20 72.7 2.6 7.1e-20 71.3 2.6 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, N-terminal PTS-HPr PF00381.19 CTQ30080.1 - 1.8e-16 60.1 0.1 4.1e-16 59.0 0.1 1.7 1 0 0 1 1 1 1 PTS HPr component phosphorylation site PEP-utilizers PF00391.23 CTQ30080.1 - 5e-12 45.4 0.0 1.1e-11 44.2 0.0 1.6 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Dak1 PF02733.17 CTQ30081.1 - 5.9e-97 324.3 0.9 8.5e-97 323.8 0.9 1.2 1 0 0 1 1 1 1 Dak1 domain Dak2 PF02734.17 CTQ30081.1 - 1.7e-39 135.5 5.9 3.4e-39 134.5 5.9 1.5 1 0 0 1 1 1 1 DAK2 domain FAD_binding_9 PF08021.11 CTQ30082.1 - 1.3e-30 106.1 0.0 2e-30 105.5 0.0 1.3 1 0 0 1 1 1 1 Siderophore-interacting FAD-binding domain SIP PF04954.13 CTQ30082.1 - 1.6e-20 73.8 0.2 2.3e-20 73.3 0.2 1.2 1 0 0 1 1 1 1 Siderophore-interacting protein PadR PF03551.14 CTQ30083.1 - 1.1e-14 54.2 0.1 2.6e-14 52.9 0.0 1.7 1 1 1 2 2 2 1 Transcriptional regulator PadR-like family RTP PF02334.16 CTQ30083.1 - 0.044 14.4 0.0 0.11 13.2 0.0 1.6 1 1 1 2 2 2 0 Replication terminator protein Aminotran_3 PF00202.21 CTQ30085.1 - 4.5e-104 348.3 0.0 6.5e-104 347.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-III GFO_IDH_MocA PF01408.22 CTQ30085.1 - 0.13 13.1 0.1 0.34 11.7 0.1 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold ABM PF03992.16 CTQ30087.1 - 7.3e-19 67.7 0.0 8.4e-19 67.5 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DeoC PF01791.9 CTQ30088.1 - 2.1e-17 63.6 0.0 3.1e-17 63.0 0.0 1.3 1 0 0 1 1 1 1 DeoC/LacD family aldolase ThiG PF05690.14 CTQ30088.1 - 0.031 13.6 0.1 0.16 11.2 0.0 1.9 1 1 1 2 2 2 0 Thiazole biosynthesis protein ThiG Peripla_BP_4 PF13407.6 CTQ30089.1 - 2.8e-54 184.4 3.0 3.5e-54 184.1 3.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ30089.1 - 0.0013 18.2 0.0 0.002 17.6 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_6 PF13458.6 CTQ30089.1 - 0.0018 18.0 5.4 0.094 12.4 0.1 2.4 1 1 1 2 2 2 2 Periplasmic binding protein Glyco_tran_WecB PF03808.13 CTQ30089.1 - 0.048 13.6 0.1 0.25 11.3 0.0 2.0 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family BPD_transp_2 PF02653.16 CTQ30090.1 - 7.8e-44 149.8 41.0 9.7e-44 149.5 41.0 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 CTQ30091.1 - 4.6e-46 157.1 42.2 4.6e-46 157.1 42.2 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 CTQ30092.1 - 2.8e-50 170.4 0.0 1e-26 94.1 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ30092.1 - 1.5e-13 51.3 0.1 0.0025 17.7 0.0 3.2 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ30092.1 - 0.00066 19.6 0.0 0.058 13.3 0.2 2.9 3 0 0 3 3 3 1 RsgA GTPase AAA_30 PF13604.6 CTQ30092.1 - 0.0042 16.8 0.2 0.022 14.5 0.0 2.2 2 1 0 2 2 2 1 AAA domain MukB PF04310.12 CTQ30092.1 - 0.0068 16.2 0.2 0.016 15.0 0.1 1.7 2 0 0 2 2 2 1 MukB N-terminal AAA_29 PF13555.6 CTQ30092.1 - 0.012 15.4 0.6 0.031 14.0 0.2 1.9 2 0 0 2 2 2 0 P-loop containing region of AAA domain SMC_N PF02463.19 CTQ30092.1 - 0.032 13.7 0.0 3.6 7.0 0.1 2.3 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CTQ30092.1 - 0.07 13.6 0.8 0.1 13.1 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 CTQ30092.1 - 0.095 12.9 0.7 3.2 7.9 0.1 3.2 2 2 0 2 2 2 0 AAA domain AAA_22 PF13401.6 CTQ30092.1 - 0.12 12.7 3.3 2.1 8.6 1.6 3.3 3 1 0 3 3 3 0 AAA domain ABC_ATPase PF09818.9 CTQ30092.1 - 0.13 11.0 3.5 1.4 7.6 0.0 3.0 3 0 0 3 3 3 0 Predicted ATPase of the ABC class AAA_28 PF13521.6 CTQ30092.1 - 0.16 12.2 0.3 1.3 9.2 0.2 2.5 2 1 1 3 3 3 0 AAA domain TsaE PF02367.17 CTQ30092.1 - 0.17 11.9 1.2 6.1 6.9 0.1 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 CTQ30092.1 - 1.1 8.8 4.4 9.2 5.8 0.1 3.5 3 1 1 4 4 4 0 AAA domain Sugar-bind PF04198.13 CTQ30093.1 - 1.4e-64 217.7 0.4 1.8e-64 217.4 0.4 1.1 1 0 0 1 1 1 1 Putative sugar-binding domain Sigma70_r4 PF04545.16 CTQ30093.1 - 0.00013 21.4 0.0 0.0004 19.8 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 MarR_2 PF12802.7 CTQ30093.1 - 0.001 18.9 0.0 0.0047 16.8 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 CTQ30093.1 - 0.0016 18.4 0.0 0.0059 16.6 0.0 1.9 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 CTQ30093.1 - 0.035 13.7 0.0 0.12 11.9 0.0 2.0 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_31 PF13560.6 CTQ30093.1 - 0.09 13.1 1.5 1.6 9.2 0.1 3.0 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_37 PF13744.6 CTQ30093.1 - 0.094 12.7 0.0 0.31 11.0 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain FGGY_N PF00370.21 CTQ30094.1 - 2.9e-50 171.1 0.0 4.8e-50 170.4 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 CTQ30094.1 - 6.3e-17 62.0 0.1 1.1e-16 61.2 0.1 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain RVT_3 PF13456.6 CTQ30094.1 - 0.1 12.4 0.3 6.2 6.7 0.1 2.5 2 0 0 2 2 2 0 Reverse transcriptase-like Oxidored_FMN PF00724.20 CTQ30095.1 - 3.7e-101 338.8 0.0 4.6e-101 338.5 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Pyr_redox_2 PF07992.14 CTQ30095.1 - 9.9e-23 80.8 0.0 2.5e-22 79.5 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ30095.1 - 1.7e-08 34.5 1.1 5e-08 33.1 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 CTQ30095.1 - 4.8e-07 29.3 0.4 0.032 13.5 0.0 3.5 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ30095.1 - 5.7e-07 30.0 3.1 0.00053 20.5 0.1 4.2 4 1 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ30095.1 - 1e-05 24.4 0.2 1e-05 24.4 0.2 1.9 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.24 CTQ30095.1 - 9.2e-05 21.7 0.4 0.00024 20.3 0.4 1.7 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 CTQ30095.1 - 0.00011 21.7 0.3 0.0002 20.9 0.3 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 CTQ30095.1 - 0.00044 19.9 15.1 0.003 17.2 0.5 4.3 3 3 0 4 4 4 2 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 CTQ30095.1 - 0.0087 15.7 0.3 0.73 9.4 0.0 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 CTQ30095.1 - 0.0099 15.8 2.6 0.15 11.9 0.1 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIDA PF01134.22 CTQ30095.1 - 0.014 14.5 2.6 0.028 13.5 0.1 2.3 2 0 0 2 2 2 0 Glucose inhibited division protein A 2-Hacid_dh_C PF02826.19 CTQ30095.1 - 0.017 14.5 0.1 7.6 5.8 0.0 2.5 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 CTQ30095.1 - 0.018 14.4 0.2 0.17 11.2 0.1 2.2 2 0 0 2 2 2 0 ThiF family NAD_binding_9 PF13454.6 CTQ30095.1 - 0.022 14.8 3.9 0.18 11.8 0.1 3.2 4 0 0 4 4 4 0 FAD-NAD(P)-binding FAD_binding_3 PF01494.19 CTQ30095.1 - 0.023 14.0 2.8 2.2 7.4 0.4 2.3 2 0 0 2 2 2 0 FAD binding domain NAD_binding_2 PF03446.15 CTQ30095.1 - 0.034 14.3 0.3 3.6 7.7 0.0 3.3 3 0 0 3 3 3 0 NAD binding domain of 6-phosphogluconate dehydrogenase Lycopene_cycl PF05834.12 CTQ30095.1 - 0.078 12.0 0.2 0.078 12.0 0.2 1.5 2 0 0 2 2 2 0 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 CTQ30095.1 - 0.17 11.2 0.0 0.17 11.2 0.0 2.5 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain MTS PF05175.14 CTQ30096.1 - 1.8e-57 193.6 0.0 1.2e-55 187.7 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_25 PF13649.6 CTQ30096.1 - 8.3e-09 36.0 0.0 2.3e-08 34.6 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CTQ30096.1 - 3.1e-07 30.3 0.0 9.6e-07 28.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ30096.1 - 1.6e-06 28.8 0.0 5.9e-06 26.9 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 CTQ30096.1 - 2.4e-05 23.9 0.0 5.1e-05 22.8 0.0 1.5 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_16 PF10294.9 CTQ30096.1 - 0.00018 21.3 0.0 0.0068 16.2 0.0 2.3 2 0 0 2 2 2 1 Lysine methyltransferase Cons_hypoth95 PF03602.15 CTQ30096.1 - 0.00036 20.2 0.0 0.00064 19.4 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 CTQ30096.1 - 0.0018 18.9 0.0 0.005 17.5 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 CTQ30096.1 - 0.0028 17.6 0.0 0.0056 16.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_10 PF05971.12 CTQ30096.1 - 0.017 14.5 0.0 0.026 13.8 0.0 1.3 1 0 0 1 1 1 0 RNA methyltransferase B3_4 PF03483.17 CTQ30097.1 - 3.1e-17 62.8 0.0 4.3e-17 62.3 0.0 1.2 1 0 0 1 1 1 1 B3/4 domain Cupin_2 PF07883.11 CTQ30098.1 - 4.6e-12 45.5 0.1 7.4e-12 44.8 0.1 1.3 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.22 CTQ30098.1 - 4e-11 42.8 0.2 7.4e-11 41.9 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ30098.1 - 1.1e-07 32.1 0.0 2.3e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 CTQ30098.1 - 1.8e-07 31.1 0.0 2.9e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 CTQ30098.1 - 7e-06 26.4 0.1 1.4e-05 25.4 0.1 1.5 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 CTQ30098.1 - 0.00056 19.7 0.1 0.0012 18.6 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 CTQ30098.1 - 0.092 12.7 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain FeoC PF09012.10 CTQ30098.1 - 0.1 12.7 0.2 0.19 11.9 0.2 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator DUF45 PF01863.17 CTQ30099.1 - 3.8e-11 43.4 0.1 3.8e-11 43.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.10 CTQ30099.1 - 0.00022 21.4 3.9 0.00031 20.9 3.0 1.5 1 1 0 1 1 1 1 WLM domain Peptidase_M56 PF05569.11 CTQ30099.1 - 0.022 14.0 0.2 0.032 13.4 0.2 1.3 1 0 0 1 1 1 0 BlaR1 peptidase M56 SprT-like PF10263.9 CTQ30099.1 - 0.024 14.5 0.2 0.036 13.9 0.2 1.4 1 1 0 1 1 1 0 SprT-like family LPD14 PF18827.1 CTQ30099.1 - 0.088 13.1 0.0 0.18 12.0 0.0 1.5 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 14 GFO_IDH_MocA PF01408.22 CTQ30100.1 - 2.7e-28 99.2 0.1 4.1e-28 98.6 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 CTQ30100.1 - 0.0035 18.0 0.1 0.0059 17.2 0.1 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain TerC PF03741.16 CTQ30101.1 - 3.3e-56 189.8 13.2 3.3e-56 189.8 13.2 1.9 2 0 0 2 2 2 1 Integral membrane protein TerC family MLANA PF14991.6 CTQ30101.1 - 0.048 14.0 0.8 1.2 9.5 0.1 2.6 2 0 0 2 2 2 0 Protein melan-A PHO4 PF01384.20 CTQ30101.1 - 0.76 8.8 19.2 0.64 9.0 3.5 2.2 1 1 1 2 2 2 0 Phosphate transporter family SDF PF00375.18 CTQ30102.1 - 3.4e-63 214.0 36.0 4e-63 213.8 36.0 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family Imp-YgjV PF10688.9 CTQ30103.1 - 2.4e-56 190.0 14.1 2.7e-56 189.8 14.1 1.0 1 0 0 1 1 1 1 Bacterial inner membrane protein CPP1-like PF11833.8 CTQ30103.1 - 5.3 6.6 7.5 11 5.6 4.4 2.1 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like GD_AH_C PF04295.13 CTQ30104.1 - 1.7e-155 517.7 0.0 2.4e-155 517.2 0.0 1.2 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus SAF PF08666.12 CTQ30104.1 - 9.2e-17 61.4 1.1 1.7e-16 60.6 1.1 1.4 1 0 0 1 1 1 1 SAF domain DAPDH_C PF16654.5 CTQ30104.1 - 0.035 13.9 0.0 0.13 12.1 0.0 2.0 1 0 0 1 1 1 0 Diaminopimelic acid dehydrogenase C-terminal domain UxaC PF02614.14 CTQ30105.1 - 3.8e-227 754.7 0.1 4.2e-227 754.5 0.1 1.0 1 0 0 1 1 1 1 Glucuronate isomerase MFS_1 PF07690.16 CTQ30106.1 - 1.4e-56 192.0 42.3 1.1e-47 162.8 21.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily GntR PF00392.21 CTQ30107.1 - 1.1e-22 79.4 0.3 2.1e-22 78.5 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 CTQ30107.1 - 1.7e-18 67.2 3.7 2.6e-18 66.6 3.7 1.3 1 0 0 1 1 1 1 FCD domain Rrf2 PF02082.20 CTQ30107.1 - 0.0027 18.0 0.0 0.0077 16.6 0.0 1.8 1 0 0 1 1 1 1 Transcriptional regulator HTH_46 PF15977.5 CTQ30107.1 - 0.004 17.1 0.2 0.026 14.5 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA binding HTH_11 PF08279.12 CTQ30107.1 - 0.12 12.4 0.3 0.57 10.2 0.0 2.2 2 0 0 2 2 2 0 HTH domain SNARE_assoc PF09335.11 CTQ30108.1 - 5.1e-22 78.6 4.0 1e-21 77.6 4.0 1.5 1 0 0 1 1 1 1 SNARE associated Golgi protein SecD-TM1 PF13721.6 CTQ30109.1 - 2.5e-13 50.4 0.0 2.9e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 SecD export protein N-terminal TM region DUF1090 PF06476.12 CTQ30110.1 - 2.4e-37 127.4 17.5 2.7e-37 127.2 17.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1090) DUF4148 PF13663.6 CTQ30110.1 - 0.011 15.9 1.4 0.37 11.0 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4148) ABC_tran_CTD PF16326.5 CTQ30110.1 - 0.013 15.7 12.4 0.3 11.3 12.2 2.4 1 1 0 1 1 1 0 ABC transporter C-terminal domain PepSY_2 PF13670.6 CTQ30110.1 - 0.026 14.5 0.0 0.067 13.2 0.0 1.7 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain FliJ PF02050.16 CTQ30110.1 - 0.14 12.4 19.8 8.1 6.7 19.8 2.8 1 1 0 1 1 1 0 Flagellar FliJ protein Viral_env_E26 PF11050.8 CTQ30110.1 - 0.28 10.5 4.3 0.58 9.5 4.3 1.5 1 1 0 1 1 1 0 Virus envelope protein E26 DUF1682 PF07946.14 CTQ30110.1 - 0.29 10.3 9.7 0.32 10.2 9.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) FapA PF03961.13 CTQ30110.1 - 0.41 9.2 8.6 0.5 8.9 8.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Exonuc_VII_L PF02601.15 CTQ30110.1 - 0.54 9.8 10.3 0.58 9.7 10.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3043 PF11241.8 CTQ30110.1 - 0.71 9.9 5.1 1.1 9.3 5.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) EMC3_TMCO1 PF01956.16 CTQ30110.1 - 0.82 9.4 11.9 0.32 10.7 8.5 1.8 1 1 1 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Gastrin PF00918.17 CTQ30110.1 - 0.96 10.4 6.9 1.4 9.9 6.9 1.3 1 0 0 1 1 1 0 Gastrin/cholecystokinin family O-antigen_lig PF13425.6 CTQ30110.1 - 0.97 8.1 2.3 1.1 7.9 2.3 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein U1snRNP70_N PF12220.8 CTQ30110.1 - 3.5 8.3 11.2 20 5.9 11.2 2.0 1 1 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal DUF4407 PF14362.6 CTQ30110.1 - 5.1 6.4 12.4 6.5 6.0 12.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FUSC PF04632.12 CTQ30110.1 - 8.3 4.8 5.3 8.9 4.7 5.3 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF883 PF05957.13 CTQ30111.1 - 3.3e-31 107.8 2.3 3.7e-31 107.6 2.3 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) ApoLp-III PF07464.11 CTQ30111.1 - 0.00028 21.0 1.0 0.00044 20.4 1.0 1.3 1 0 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) YtxH PF12732.7 CTQ30111.1 - 0.0014 19.1 13.3 0.18 12.4 1.3 2.9 2 1 0 2 2 2 2 YtxH-like protein Apolipoprotein PF01442.18 CTQ30111.1 - 0.0031 17.4 5.7 0.004 17.1 5.7 1.1 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF4404 PF14357.6 CTQ30111.1 - 0.014 16.1 4.2 0.019 15.6 2.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) HisKA_3 PF07730.13 CTQ30111.1 - 0.018 15.5 0.5 0.018 15.5 0.5 2.0 1 1 1 2 2 2 0 Histidine kinase Gly-zipper_YMGG PF13441.6 CTQ30111.1 - 0.024 14.4 0.0 0.033 13.9 0.0 1.2 1 0 0 1 1 1 0 YMGG-like Gly-zipper RelB_leu_zip PF16180.5 CTQ30111.1 - 0.053 13.5 0.1 0.068 13.2 0.1 1.3 1 0 0 1 1 1 0 RelB leucine zipper RNase_E_G PF10150.9 CTQ30111.1 - 0.066 12.6 0.4 0.076 12.4 0.4 1.0 1 0 0 1 1 1 0 Ribonuclease E/G family Mt_ATP-synt_B PF05405.14 CTQ30111.1 - 0.069 12.8 0.2 0.084 12.5 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF543 PF04418.12 CTQ30111.1 - 0.071 13.1 0.1 0.1 12.6 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF543) DUF1451 PF07295.11 CTQ30111.1 - 0.13 12.3 1.4 0.18 11.9 0.6 1.6 1 1 1 2 2 2 0 Zinc-ribbon containing domain MCU PF04678.13 CTQ30111.1 - 0.14 12.2 0.1 0.16 12.0 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter Spore_III_AB PF09548.10 CTQ30111.1 - 0.14 12.2 2.7 0.079 13.1 0.4 1.6 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) Nbl1_Borealin_N PF10444.9 CTQ30111.1 - 0.22 11.2 1.0 6.5 6.5 0.3 2.2 2 0 0 2 2 2 0 Nbl1 / Borealin N terminal Phage_holin_3_6 PF07332.11 CTQ30112.1 - 1.5e-18 66.8 14.1 1.9e-18 66.6 14.1 1.0 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III Serinc PF03348.15 CTQ30112.1 - 0.054 12.4 1.1 0.066 12.1 1.1 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) DUF4131 PF13567.6 CTQ30112.1 - 1.1 8.9 4.2 1.7 8.3 4.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) YqjK PF13997.6 CTQ30113.1 - 5.1e-30 103.5 9.7 6.6e-30 103.2 9.7 1.1 1 0 0 1 1 1 1 YqjK-like protein DUF2508 PF10704.9 CTQ30113.1 - 0.044 14.0 0.2 0.055 13.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2508) DoxX PF07681.12 CTQ30114.1 - 1.8e-17 63.7 12.9 2.9e-17 63.0 12.9 1.3 1 0 0 1 1 1 1 DoxX DUF1270 PF06900.11 CTQ30114.1 - 0.00019 21.7 5.8 0.073 13.5 0.2 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF1270) SURF4 PF02077.15 CTQ30114.1 - 0.00072 19.2 1.0 0.00094 18.8 1.0 1.5 1 1 0 1 1 1 1 SURF4 family DoxD PF04173.13 CTQ30114.1 - 0.0092 15.9 1.6 0.0092 15.9 1.6 1.8 1 1 1 2 2 2 1 TQO small subunit DoxD DoxX_2 PF13564.6 CTQ30114.1 - 0.014 15.4 8.6 0.02 15.0 8.5 1.3 1 1 0 1 1 1 0 DoxX-like family GST_N_2 PF13409.6 CTQ30115.1 - 2.6e-22 78.9 0.0 5.4e-22 77.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 CTQ30115.1 - 9.3e-13 48.0 0.0 2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 CTQ30115.1 - 2.4e-06 27.7 0.0 6.6e-06 26.3 0.0 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 CTQ30115.1 - 0.00011 22.3 0.0 0.0002 21.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 CTQ30115.1 - 0.00023 21.5 0.0 0.0036 17.7 0.0 2.2 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 CTQ30115.1 - 0.067 13.0 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DUF805 PF05656.14 CTQ30116.1 - 1.4e-34 118.6 2.3 1.6e-34 118.5 2.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF805) LysR_substrate PF03466.20 CTQ30117.1 - 1.2e-17 64.0 0.4 1.8e-17 63.4 0.4 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ30117.1 - 1.5e-16 60.0 0.1 5.4e-16 58.3 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ30117.1 - 0.0062 16.4 0.6 0.026 14.4 0.1 2.1 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 CTQ30117.1 - 0.021 14.9 0.7 0.094 12.8 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Pirin_C_2 PF17954.1 CTQ30118.1 - 4.3e-24 84.5 0.3 2.1e-23 82.3 0.1 1.9 2 0 0 2 2 2 1 Quercetinase C-terminal cupin domain Pirin PF02678.16 CTQ30118.1 - 6.8e-23 80.7 0.0 1.3e-22 79.9 0.0 1.4 1 0 0 1 1 1 1 Pirin Cupin_2 PF07883.11 CTQ30118.1 - 0.0004 20.0 0.0 0.0016 18.1 0.0 1.9 2 0 0 2 2 2 1 Cupin domain Pirin_C PF05726.13 CTQ30118.1 - 0.033 14.5 0.1 5.4 7.4 0.0 2.2 2 0 0 2 2 2 0 Pirin C-terminal cupin domain Cupin_3 PF05899.12 CTQ30118.1 - 0.047 13.4 0.0 0.98 9.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF861) EutQ PF06249.12 CTQ30118.1 - 0.087 12.6 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ LTXXQ PF07813.12 CTQ30120.1 - 9.3e-06 26.3 0.2 1.4e-05 25.7 0.2 1.3 1 0 0 1 1 1 1 LTXXQ motif family protein DUF4509 PF14970.6 CTQ30120.1 - 0.0061 16.5 0.3 0.0075 16.2 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4509) Metal_resist PF13801.6 CTQ30120.1 - 0.0074 16.5 0.1 0.0096 16.1 0.1 1.2 1 0 0 1 1 1 1 Heavy-metal resistance Vac14_Fab1_bd PF12755.7 CTQ30120.1 - 0.043 14.4 1.0 0.12 13.0 0.3 1.9 1 1 1 2 2 2 0 Vacuolar 14 Fab1-binding region RNA_pol_Rpb5_C PF01191.19 CTQ30120.1 - 0.051 13.4 0.5 1.3 8.9 0.0 2.7 1 1 0 2 2 2 0 RNA polymerase Rpb5, C-terminal domain DUF2680 PF10925.8 CTQ30120.1 - 1.2 9.2 6.7 0.76 9.8 1.8 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2680) tRNA_anti-like PF12869.7 CTQ30121.1 - 3.3e-36 124.3 0.0 3.7e-36 124.2 0.0 1.0 1 0 0 1 1 1 1 tRNA_anti-like DUF4839 PF16127.5 CTQ30121.1 - 0.087 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4839) Arb1 PF09692.10 CTQ30122.1 - 5.2 6.1 5.3 3.4 6.7 0.8 1.9 1 1 1 2 2 2 0 Argonaute siRNA chaperone (ARC) complex subunit Arb1 Gly_kinase PF02595.15 CTQ30125.1 - 1.5e-149 498.0 6.6 1.6e-149 497.9 6.6 1.0 1 0 0 1 1 1 1 Glycerate kinase family NAD_binding_2 PF03446.15 CTQ30126.1 - 1.7e-51 174.5 1.6 2.8e-51 173.8 1.6 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 CTQ30126.1 - 5.9e-38 129.8 2.2 5.9e-38 129.8 2.2 1.5 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 CTQ30126.1 - 3.9e-09 37.0 1.3 5.7e-08 33.2 0.2 2.4 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 CTQ30126.1 - 2.8e-06 26.8 0.1 9.1e-06 25.1 0.1 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 CTQ30126.1 - 0.00016 21.6 0.3 0.00043 20.2 0.1 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 CTQ30126.1 - 0.01 15.4 0.2 0.025 14.2 0.1 1.7 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_N PF05222.15 CTQ30126.1 - 0.043 14.1 0.0 0.1 12.9 0.0 1.6 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, N-terminal domain Shikimate_DH PF01488.20 CTQ30126.1 - 0.043 13.9 0.8 0.11 12.5 0.1 2.0 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.18 CTQ30126.1 - 0.053 13.8 0.0 0.18 12.1 0.0 1.9 1 0 0 1 1 1 0 TrkA-N domain UDPG_MGDP_dh PF00984.19 CTQ30126.1 - 0.13 12.5 0.2 0.33 11.2 0.2 1.8 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, central domain HpcH_HpaI PF03328.14 CTQ30127.1 - 7.6e-62 208.3 0.0 8.7e-62 208.1 0.0 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 CTQ30127.1 - 0.011 14.6 0.0 0.014 14.3 0.0 1.2 1 0 0 1 1 1 0 Pyruvate kinase, barrel domain PEP-utilizers_C PF02896.18 CTQ30127.1 - 0.11 11.6 0.0 4.8 6.2 0.0 2.2 2 0 0 2 2 2 0 PEP-utilising enzyme, TIM barrel domain MFS_1 PF07690.16 CTQ30128.1 - 3.5e-53 180.8 53.5 1.5e-47 162.3 41.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ30128.1 - 0.00078 18.4 38.7 0.01 14.8 12.2 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter GD_AH_C PF04295.13 CTQ30129.1 - 4.8e-146 486.6 0.0 5.6e-146 486.3 0.0 1.0 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus SAF PF08666.12 CTQ30129.1 - 1.9e-13 50.8 1.1 6.7e-13 49.1 0.4 2.2 2 0 0 2 2 2 1 SAF domain TP_methylase PF00590.20 CTQ30130.1 - 1.2e-29 103.8 0.7 1.5e-29 103.5 0.1 1.5 2 0 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases UPA PF17217.3 CTQ30130.1 - 0.044 13.7 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 UPA domain LppC PF04348.13 CTQ30131.1 - 1.3e-132 443.4 26.3 3.1e-85 287.0 0.3 2.0 2 0 0 2 2 2 2 LppC putative lipoprotein ANAPC3 PF12895.7 CTQ30131.1 - 0.018 15.2 2.0 0.036 14.3 0.7 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 CTQ30131.1 - 0.069 13.7 17.7 0.11 13.0 1.9 4.0 3 1 1 4 4 4 0 Tetratricopeptide repeat UPF0102 PF02021.17 CTQ30132.1 - 2.6e-26 91.6 0.1 3.2e-26 91.4 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 Vsr PF03852.15 CTQ30132.1 - 0.022 14.6 0.0 0.035 13.9 0.0 1.3 1 0 0 1 1 1 0 DNA mismatch endonuclease Vsr SIS_2 PF13580.6 CTQ30133.1 - 3.1e-33 114.7 1.4 3.7e-33 114.5 1.4 1.1 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 CTQ30133.1 - 4.1e-07 29.9 0.6 1.3e-05 25.1 0.0 2.5 3 0 0 3 3 3 1 SIS domain HobA PF12163.8 CTQ30133.1 - 0.031 13.9 0.0 0.044 13.4 0.0 1.2 1 0 0 1 1 1 0 DNA replication regulator BON PF04972.17 CTQ30134.1 - 1e-30 105.8 3.1 4.2e-15 55.8 0.3 2.2 2 0 0 2 2 2 2 BON domain ArsP_1 PF03773.13 CTQ30135.1 - 1.9e-36 125.8 35.6 7.2e-26 91.0 26.3 2.1 1 1 1 2 2 2 2 Predicted permease NAD_binding_10 PF13460.6 CTQ30136.1 - 1.7e-08 34.6 0.0 2.6e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 CTQ30136.1 - 3.7e-06 27.4 0.0 3.3e-05 24.3 0.0 2.2 2 1 1 3 3 3 1 Semialdehyde dehydrogenase, NAD binding domain Epimerase PF01370.21 CTQ30136.1 - 0.00038 20.0 0.0 0.00062 19.3 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 CTQ30136.1 - 0.033 13.3 0.0 1.4 8.0 0.0 2.2 2 1 0 2 2 2 0 Male sterility protein DJ-1_PfpI PF01965.24 CTQ30137.1 - 4e-53 179.6 0.0 4.5e-53 179.4 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 CTQ30137.1 - 0.00046 20.0 0.0 0.00088 19.1 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 CTQ30137.1 - 0.0078 15.8 0.0 0.011 15.3 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 CTQ30137.1 - 0.029 14.1 0.0 0.056 13.2 0.0 1.5 1 1 0 1 1 1 0 Peptidase C26 SNO PF01174.19 CTQ30137.1 - 0.063 13.1 0.0 0.08 12.8 0.0 1.3 1 0 0 1 1 1 0 SNO glutamine amidotransferase family GATase_5 PF13507.6 CTQ30137.1 - 0.12 11.5 0.0 0.23 10.5 0.0 1.5 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain GIY-YIG PF01541.24 CTQ30139.1 - 3.5e-14 52.8 0.0 4.6e-14 52.4 0.0 1.1 1 0 0 1 1 1 1 GIY-YIG catalytic domain Acetyltransf_7 PF13508.7 CTQ30140.1 - 6.1e-12 45.8 0.1 8.8e-12 45.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ30140.1 - 2.8e-09 37.2 0.1 3.8e-09 36.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 CTQ30140.1 - 3.9e-08 33.4 0.0 5.6e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ30140.1 - 2.5e-05 24.2 0.0 4.8e-05 23.3 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ30140.1 - 0.00043 20.4 0.0 0.00088 19.4 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_6 PF13480.7 CTQ30140.1 - 0.051 13.7 0.5 0.11 12.6 0.5 1.5 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 CTQ30140.1 - 0.24 10.8 0.0 0.32 10.5 0.0 1.2 1 0 0 1 1 1 0 Putative acetyl-transferase SCP2 PF02036.17 CTQ30141.1 - 4.2e-17 62.5 0.0 6.3e-17 61.9 0.0 1.2 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 CTQ30141.1 - 0.00028 21.1 0.0 0.00063 20.0 0.0 1.5 1 1 1 2 2 2 1 Alkyl sulfatase C-terminal MDMPI_C PF07398.11 CTQ30141.1 - 0.013 16.3 0.2 0.02 15.7 0.2 1.3 1 0 0 1 1 1 0 MDMPI C-terminal domain Peptidase_U32 PF01136.19 CTQ30142.1 - 1e-66 224.5 0.0 1.3e-66 224.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family U32 DNAPolymera_Pol PF11590.8 CTQ30142.1 - 0.077 12.9 1.2 7.6 6.5 0.2 2.4 2 0 0 2 2 2 0 DNA polymerase catalytic subunit Pol AP_endonuc_2 PF01261.24 CTQ30142.1 - 0.16 11.4 1.4 0.21 11.0 0.5 1.7 2 1 0 2 2 2 0 Xylose isomerase-like TIM barrel Peptidase_U32 PF01136.19 CTQ30143.1 - 4.1e-12 45.8 0.0 5.6e-12 45.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase family U32 Bac_luciferase PF00296.20 CTQ30144.1 - 1.5e-35 123.2 0.3 1.9e-34 119.6 0.3 1.9 1 1 0 1 1 1 1 Luciferase-like monooxygenase Trp_Tyr_perm PF03222.13 CTQ30145.1 - 2e-149 497.9 26.3 2.3e-149 497.7 26.3 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 CTQ30145.1 - 1.1e-06 27.6 17.5 1.7e-06 27.0 17.5 1.3 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DEAD PF00270.29 CTQ30147.1 - 1.6e-51 174.5 0.0 5.5e-51 172.8 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CTQ30147.1 - 4.6e-31 107.4 0.0 4.2e-29 101.1 0.1 2.7 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DbpA PF03880.15 CTQ30147.1 - 1.3e-20 73.1 0.0 3.1e-20 71.9 0.0 1.7 1 0 0 1 1 1 1 DbpA RNA binding domain DEADboxA PF12343.8 CTQ30147.1 - 4.4e-17 62.4 44.2 4.4e-17 62.4 44.2 2.7 2 0 0 2 2 2 1 Cold shock protein DEAD box A ResIII PF04851.15 CTQ30147.1 - 0.00012 22.1 0.0 0.00035 20.6 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 CTQ30147.1 - 0.0066 15.8 0.5 0.014 14.7 0.0 1.7 2 0 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit AAA_30 PF13604.6 CTQ30147.1 - 0.029 14.1 0.0 0.065 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain DRTGG PF07085.12 CTQ30147.1 - 0.13 12.1 0.0 0.48 10.2 0.0 1.9 2 0 0 2 2 2 0 DRTGG domain AAA_22 PF13401.6 CTQ30147.1 - 0.99 9.7 3.1 3.8 7.8 0.2 3.1 3 1 0 3 3 3 0 AAA domain TPR_2 PF07719.17 CTQ30148.1 - 6.7e-15 53.9 13.5 5.7e-05 22.9 0.0 4.8 5 0 0 5 5 4 4 Tetratricopeptide repeat TPR_1 PF00515.28 CTQ30148.1 - 4.5e-14 51.6 7.7 1.2e-05 24.9 0.0 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 CTQ30148.1 - 6.8e-11 41.7 2.8 0.00012 21.7 1.2 4.2 3 1 1 4 4 4 2 TPR repeat TPR_9 PF13371.6 CTQ30148.1 - 2.5e-10 40.3 9.2 1.7e-05 24.8 0.9 2.7 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 CTQ30148.1 - 3.4e-10 39.3 0.9 0.035 14.3 0.0 3.9 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ30148.1 - 4.3e-08 33.3 9.1 0.0028 18.4 0.0 5.1 2 1 3 5 5 5 3 Tetratricopeptide repeat TPR_19 PF14559.6 CTQ30148.1 - 2.3e-06 28.0 3.4 2.8e-05 24.5 0.1 3.4 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 CTQ30148.1 - 4.3e-06 27.3 16.3 0.002 18.7 2.4 3.7 2 1 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 CTQ30148.1 - 7.9e-05 22.8 7.8 1.5 9.4 0.0 5.0 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 CTQ30148.1 - 0.0013 18.9 14.8 0.22 11.8 0.6 3.8 3 1 1 4 4 3 2 Tetratricopeptide repeat TAtT PF16811.5 CTQ30148.1 - 0.0074 15.6 0.6 1.5 8.0 0.1 2.3 2 0 0 2 2 2 2 TRAP transporter T-component TPR_7 PF13176.6 CTQ30148.1 - 0.016 15.2 8.1 11 6.3 0.1 4.5 4 1 0 4 4 4 0 Tetratricopeptide repeat TPR_10 PF13374.6 CTQ30148.1 - 0.031 14.2 7.7 3.7 7.5 0.0 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 CTQ30148.1 - 0.037 14.7 13.3 17 6.3 0.0 5.5 5 0 0 5 5 5 0 Tetratricopeptide repeat RPN7 PF10602.9 CTQ30148.1 - 0.038 13.7 1.0 0.22 11.2 0.2 2.4 2 1 0 2 2 2 0 26S proteasome subunit RPN7 IF-2 PF11987.8 CTQ30148.1 - 0.055 13.6 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Translation-initiation factor 2 RNase_PH PF01138.21 CTQ30149.1 - 1.2e-42 145.5 0.0 2.3e-21 76.7 0.0 2.6 2 0 0 2 2 2 2 3' exoribonuclease family, domain 1 PNPase PF03726.14 CTQ30149.1 - 7.2e-26 90.5 1.7 7.2e-26 90.5 1.7 2.0 2 0 0 2 2 2 1 Polyribonucleotide nucleotidyltransferase, RNA binding domain S1 PF00575.23 CTQ30149.1 - 3e-22 78.8 3.4 3e-22 78.8 3.4 2.6 2 0 0 2 2 2 1 S1 RNA binding domain RNase_PH_C PF03725.15 CTQ30149.1 - 4.9e-21 74.5 2.1 4.2e-14 52.3 0.1 2.8 2 0 0 2 2 2 2 3' exoribonuclease family, domain 2 KH_1 PF00013.29 CTQ30149.1 - 3.5e-09 36.4 2.8 3.5e-09 36.4 2.8 2.2 2 0 0 2 2 2 1 KH domain KH_2 PF07650.17 CTQ30149.1 - 0.0011 18.8 3.2 0.0019 18.0 0.2 2.7 2 0 0 2 2 2 1 KH domain S1_2 PF13509.6 CTQ30149.1 - 0.0012 18.8 0.0 0.0074 16.3 0.0 2.4 1 1 1 2 2 2 1 S1 domain DUF4172 PF13776.6 CTQ30149.1 - 0.12 12.7 0.6 0.59 10.5 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4172) Ribosomal_S15 PF00312.22 CTQ30150.1 - 7.6e-38 128.6 1.0 8.5e-38 128.4 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S15 TruB_N PF01509.18 CTQ30151.1 - 1.6e-56 190.8 0.0 2.1e-56 190.4 0.0 1.2 1 0 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 CTQ30151.1 - 4.6e-22 77.9 0.1 8.1e-22 77.2 0.1 1.4 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain TruB-C_2 PF09157.11 CTQ30151.1 - 9.9e-20 70.3 0.1 2.6e-19 69.0 0.1 1.8 1 0 0 1 1 1 1 Pseudouridine synthase II TruB, C-terminal RBFA PF02033.18 CTQ30152.1 - 2.1e-33 114.9 0.0 2.5e-33 114.7 0.0 1.1 1 0 0 1 1 1 1 Ribosome-binding factor A DUF3047 PF11249.8 CTQ30152.1 - 0.013 14.9 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3047) GTP_EFTU PF00009.27 CTQ30153.1 - 9.9e-37 126.4 1.7 8e-35 120.1 1.7 3.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 CTQ30153.1 - 1.2e-36 125.0 2.0 4.1e-36 123.3 2.0 2.0 1 0 0 1 1 1 1 Translation-initiation factor 2 IF2_N PF04760.15 CTQ30153.1 - 1.7e-24 85.4 5.6 7.8e-15 54.4 1.2 2.8 2 0 0 2 2 2 2 Translation initiation factor IF-2, N-terminal region IF2_assoc PF08364.11 CTQ30153.1 - 7.5e-16 58.1 4.6 7.5e-16 58.1 4.6 2.3 2 0 0 2 2 2 1 Bacterial translation initiation factor IF-2 associated region MMR_HSR1 PF01926.23 CTQ30153.1 - 6e-10 39.2 0.1 2.1e-09 37.5 0.1 2.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 CTQ30153.1 - 8.3e-10 38.9 6.6 8.6e-07 29.3 0.4 4.0 3 0 0 3 3 3 2 Elongation factor Tu domain 2 Ras PF00071.22 CTQ30153.1 - 8.1e-06 25.5 0.2 6.2e-05 22.7 0.0 2.6 2 0 0 2 2 2 1 Ras family Arf PF00025.21 CTQ30153.1 - 3.6e-05 23.3 0.0 0.00014 21.4 0.0 2.0 2 0 0 2 2 2 1 ADP-ribosylation factor family FeoB_N PF02421.18 CTQ30153.1 - 0.00017 21.2 0.0 0.00045 19.8 0.0 1.8 1 0 0 1 1 1 1 Ferrous iron transport protein B PduV-EutP PF10662.9 CTQ30153.1 - 0.0021 17.8 0.1 0.0074 16.0 0.0 2.0 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation MMR_HSR1_Xtn PF16897.5 CTQ30153.1 - 0.0034 17.4 0.1 0.025 14.6 0.0 2.5 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain Roc PF08477.13 CTQ30153.1 - 0.0037 17.5 0.0 0.0097 16.1 0.0 1.8 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 CTQ30153.1 - 0.0055 16.2 0.0 0.0055 16.2 0.0 2.5 2 1 0 2 2 2 1 Signal recognition particle receptor beta subunit GTP_EFTU_D4 PF14578.6 CTQ30153.1 - 0.15 12.0 2.9 0.35 10.8 0.2 2.8 2 0 0 2 2 2 0 Elongation factor Tu domain 4 NusA_N PF08529.11 CTQ30154.1 - 3.8e-38 130.6 8.4 1.1e-37 129.1 8.4 1.8 1 0 0 1 1 1 1 NusA N-terminal domain KH_5 PF13184.6 CTQ30154.1 - 6.2e-29 99.9 3.5 1.7e-27 95.3 0.2 3.0 3 0 0 3 3 3 1 NusA-like KH domain HHH_5 PF14520.6 CTQ30154.1 - 5.7e-16 58.9 2.0 4.2e-10 40.1 0.3 3.2 2 1 1 3 3 3 2 Helix-hairpin-helix domain S1 PF00575.23 CTQ30154.1 - 5e-05 23.6 1.3 0.0001 22.6 0.1 2.3 2 0 0 2 2 2 1 S1 RNA binding domain DUF4332 PF14229.6 CTQ30154.1 - 0.012 15.9 0.2 6.2 7.1 0.3 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4332) KH_2 PF07650.17 CTQ30154.1 - 0.017 15.0 4.3 0.027 14.3 0.0 3.3 4 0 0 4 4 4 0 KH domain KH_4 PF13083.6 CTQ30154.1 - 0.027 14.3 0.2 0.29 11.0 0.0 2.8 2 0 0 2 2 2 0 KH domain DNA_pol_lambd_f PF10391.9 CTQ30154.1 - 0.13 12.1 0.0 8.7 6.3 0.0 3.2 3 0 0 3 3 3 0 Fingers domain of DNA polymerase lambda HHH_2 PF12826.7 CTQ30154.1 - 0.38 10.9 4.4 4.2 7.5 0.1 3.1 3 0 0 3 3 3 0 Helix-hairpin-helix motif DUF150 PF02576.17 CTQ30155.1 - 3.9e-28 97.7 0.1 7.7e-28 96.7 0.1 1.5 1 0 0 1 1 1 1 RimP N-terminal domain DUF150_C PF17384.2 CTQ30155.1 - 1e-22 80.0 0.1 1.5e-22 79.5 0.1 1.3 1 0 0 1 1 1 1 RimP C-terminal SH3 domain Arginosuc_synth PF00764.19 CTQ30157.1 - 3.7e-56 191.1 0.0 4.6e-56 190.8 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 CTQ30157.1 - 0.017 14.6 0.0 0.034 13.7 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC HTH_46 PF15977.5 CTQ30158.1 - 1.1e-27 95.8 0.8 1.9e-27 95.0 0.8 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA binding cNMP_binding PF00027.29 CTQ30158.1 - 3.8e-06 26.9 0.0 7.8e-06 25.9 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain SWIRM PF04433.17 CTQ30158.1 - 0.022 15.1 0.1 0.035 14.4 0.1 1.4 1 0 0 1 1 1 0 SWIRM domain Rrf2 PF02082.20 CTQ30158.1 - 0.024 15.0 0.1 0.042 14.2 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator YfaZ PF07437.11 CTQ30159.1 - 2e-56 190.5 5.7 2.2e-56 190.4 5.7 1.0 1 0 0 1 1 1 1 YfaZ precursor OMP_b-brl PF13505.6 CTQ30159.1 - 0.00032 20.9 12.4 0.00087 19.5 12.4 1.7 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain NHS PF15273.6 CTQ30160.1 - 0.025 13.7 0.2 0.026 13.7 0.2 1.0 1 0 0 1 1 1 0 NHS-like DUF3446 PF11928.8 CTQ30160.1 - 0.051 13.9 0.2 0.1 12.9 0.2 1.4 1 0 0 1 1 1 0 Early growth response N-terminal domain SecG PF03840.14 CTQ30161.1 - 7e-22 77.3 11.4 8.6e-22 77.0 11.4 1.1 1 0 0 1 1 1 1 Preprotein translocase SecG subunit PGM_PMM_I PF02878.16 CTQ30162.1 - 4e-45 152.9 0.0 1.6e-44 151.0 0.0 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 CTQ30162.1 - 7e-31 106.8 0.1 1.2e-30 106.0 0.1 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 CTQ30162.1 - 4.1e-20 72.3 0.2 1.2e-19 70.8 0.1 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 CTQ30162.1 - 1.3e-15 57.3 1.4 2.8e-15 56.2 0.5 2.2 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF384 PF04064.13 CTQ30162.1 - 0.22 11.4 0.7 0.38 10.7 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF384) Pterin_bind PF00809.22 CTQ30163.1 - 2e-91 306.1 0.0 2.3e-91 305.8 0.0 1.0 1 0 0 1 1 1 1 Pterin binding enzyme Peptidase_M41 PF01434.18 CTQ30164.1 - 3.8e-73 245.4 0.1 6.5e-73 244.7 0.1 1.4 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 CTQ30164.1 - 2.5e-46 157.4 0.0 6.9e-46 155.9 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) FtsH_ext PF06480.15 CTQ30164.1 - 3.9e-17 62.6 0.2 3.9e-17 62.6 0.2 1.8 2 0 0 2 2 2 1 FtsH Extracellular AAA_lid_3 PF17862.1 CTQ30164.1 - 1.7e-11 43.7 0.1 3.4e-11 42.8 0.1 1.5 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 CTQ30164.1 - 3.2e-06 27.2 0.0 1.6e-05 24.9 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 CTQ30164.1 - 7.1e-06 25.5 0.0 1.3e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain RuvB_N PF05496.12 CTQ30164.1 - 0.00026 20.8 0.0 0.001 18.9 0.0 2.0 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 CTQ30164.1 - 0.0019 18.4 0.0 0.0048 17.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ30164.1 - 0.0028 18.0 1.6 0.048 14.1 0.1 2.7 3 1 1 4 4 2 1 AAA ATPase domain CSTF2_hinge PF14327.6 CTQ30164.1 - 0.0034 17.8 0.1 0.0091 16.4 0.1 1.7 1 0 0 1 1 1 1 Hinge domain of cleavage stimulation factor subunit 2 AAA_2 PF07724.14 CTQ30164.1 - 0.0039 17.3 0.1 0.018 15.2 0.0 2.2 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) IstB_IS21 PF01695.17 CTQ30164.1 - 0.004 16.9 0.0 0.0089 15.8 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein Mg_chelatase PF01078.21 CTQ30164.1 - 0.0041 16.5 0.2 0.0096 15.3 0.2 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 CTQ30164.1 - 0.0067 16.7 0.4 0.2 11.9 0.1 2.8 2 1 1 3 3 3 1 AAA domain ABC_tran PF00005.27 CTQ30164.1 - 0.024 15.1 0.7 0.23 12.0 0.1 2.5 3 0 0 3 3 2 0 ABC transporter Zeta_toxin PF06414.12 CTQ30164.1 - 0.052 12.8 0.1 0.12 11.6 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin Sigma54_activat PF00158.26 CTQ30164.1 - 0.053 13.2 0.0 0.29 10.8 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 CTQ30164.1 - 0.072 12.6 0.2 0.22 11.0 0.2 1.8 1 1 0 1 1 1 0 P-loop containing dynein motor region PhoH PF02562.16 CTQ30164.1 - 0.099 12.1 0.3 0.24 10.8 0.3 1.6 1 0 0 1 1 1 0 PhoH-like protein AAA_24 PF13479.6 CTQ30164.1 - 0.12 12.1 0.0 0.42 10.3 0.0 1.9 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 CTQ30164.1 - 0.13 12.4 0.0 0.35 11.0 0.0 1.7 2 0 0 2 2 1 0 Sigma-54 interaction domain AAA_PrkA PF08298.11 CTQ30164.1 - 0.15 11.0 0.0 0.25 10.2 0.0 1.3 1 0 0 1 1 1 0 PrkA AAA domain AAA_14 PF13173.6 CTQ30164.1 - 0.15 12.1 0.0 0.37 10.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 CTQ30164.1 - 0.16 12.2 0.0 0.37 11.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF4245 PF14030.6 CTQ30164.1 - 0.21 11.6 0.5 1.5 8.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4245) FtsJ PF01728.19 CTQ30165.1 - 5.9e-58 195.9 0.0 7.2e-58 195.6 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_25 PF13649.6 CTQ30165.1 - 0.037 14.7 0.5 2.3 9.0 0.2 3.0 2 1 1 3 3 3 0 Methyltransferase domain CRS1_YhbY PF01985.21 CTQ30166.1 - 3.9e-22 78.2 0.6 4.7e-22 77.9 0.6 1.1 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain Tafi-CsgC PF10610.9 CTQ30166.1 - 0.15 12.3 1.8 0.35 11.1 0.3 2.0 2 1 0 2 2 2 0 Thin aggregative fimbriae synthesis protein GreA_GreB_N PF03449.15 CTQ30167.1 - 1.2e-32 111.9 1.6 1.7e-32 111.4 1.6 1.3 1 0 0 1 1 1 1 Transcription elongation factor, N-terminal GreA_GreB PF01272.19 CTQ30167.1 - 7.7e-30 102.6 0.2 1.1e-29 102.1 0.2 1.2 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term DDR_swiveling PF18427.1 CTQ30167.1 - 0.058 13.4 0.2 0.64 10.0 0.1 2.1 1 1 1 2 2 2 0 DD-reactivating factor swiveling domain Peptidase_S13 PF02113.15 CTQ30168.1 - 1.7e-170 567.5 0.0 2e-170 567.3 0.0 1.0 1 0 0 1 1 1 1 D-Ala-D-Ala carboxypeptidase 3 (S13) family Beta-lactamase2 PF13354.6 CTQ30168.1 - 4.5e-06 26.4 0.3 0.00026 20.6 0.2 2.9 2 1 0 2 2 2 1 Beta-lactamase enzyme family Transpeptidase PF00905.22 CTQ30168.1 - 0.068 12.4 1.3 0.45 9.7 0.0 2.4 2 1 0 2 2 2 0 Penicillin binding protein transpeptidase domain TrbL PF04610.14 CTQ30168.1 - 0.33 10.7 1.5 0.37 10.5 0.1 1.7 2 0 0 2 2 2 0 TrbL/VirB6 plasmid conjugal transfer protein GTP1_OBG PF01018.22 CTQ30169.1 - 1.8e-59 199.8 5.7 2.6e-59 199.3 5.7 1.2 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 CTQ30169.1 - 8.8e-24 83.8 0.0 1.6e-23 82.9 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CTQ30169.1 - 6.6e-10 38.7 0.0 4e-07 29.7 0.0 2.1 2 0 0 2 2 2 2 Ferrous iron transport protein B MeaB PF03308.16 CTQ30169.1 - 0.0098 14.9 0.5 1.3 8.0 0.0 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 CTQ30169.1 - 0.046 13.6 0.0 0.33 10.8 0.0 2.1 2 0 0 2 2 2 0 RsgA GTPase ATP_bind_1 PF03029.17 CTQ30169.1 - 0.13 12.0 0.0 7.1 6.3 0.0 2.3 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein Gtr1_RagA PF04670.12 CTQ30169.1 - 0.16 11.3 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Ribosomal_L27 PF01016.19 CTQ30172.1 - 2.4e-39 133.2 2.5 2.7e-39 133.1 2.5 1.0 1 0 0 1 1 1 1 Ribosomal L27 protein Ribosomal_L21p PF00829.21 CTQ30174.1 - 5.3e-37 126.1 3.0 5.9e-37 126.0 3.0 1.0 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein polyprenyl_synt PF00348.17 CTQ30175.1 - 1.5e-75 253.6 0.2 1.8e-75 253.3 0.2 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase UbiA PF01040.18 CTQ30175.1 - 0.09 12.1 0.2 0.36 10.1 0.2 1.8 2 0 0 2 2 2 0 UbiA prenyltransferase family HEPPP_synt_1 PF07307.11 CTQ30175.1 - 0.11 12.1 0.1 0.17 11.5 0.1 1.3 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 HTH_35 PF13693.6 CTQ30176.1 - 1.8e-34 117.6 0.2 2.1e-34 117.4 0.2 1.0 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding EPSP_synthase PF00275.20 CTQ30177.1 - 6.3e-132 440.2 0.3 7.2e-132 440.0 0.3 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BolA PF01722.18 CTQ30179.1 - 1.6e-14 53.9 0.0 1.8e-14 53.7 0.0 1.1 1 0 0 1 1 1 1 BolA-like protein DUF3206 PF11472.8 CTQ30179.1 - 0.13 12.3 0.0 0.22 11.5 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3206) GP70 PF17429.2 CTQ30179.1 - 0.15 11.9 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Gene product 70 STAS_2 PF13466.6 CTQ30180.1 - 2.3e-15 56.7 2.2 2.7e-15 56.5 2.2 1.1 1 0 0 1 1 1 1 STAS domain STAS PF01740.21 CTQ30180.1 - 8e-05 22.3 0.0 8e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 STAS domain MlaC PF05494.12 CTQ30181.1 - 4.3e-54 182.7 0.1 5.1e-54 182.5 0.1 1.1 1 0 0 1 1 1 1 MlaC protein MlaD PF02470.20 CTQ30182.1 - 5.3e-22 77.9 0.0 7.3e-22 77.5 0.0 1.2 1 0 0 1 1 1 1 MlaD protein MlaE PF02405.16 CTQ30183.1 - 2.9e-72 242.8 18.1 3.6e-72 242.5 18.1 1.1 1 0 0 1 1 1 1 Permease MlaE ABC_tran PF00005.27 CTQ30184.1 - 3.4e-28 98.9 0.0 4.6e-28 98.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30184.1 - 6e-08 32.9 0.2 0.0013 18.6 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ30184.1 - 0.00057 19.8 0.0 0.00085 19.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 CTQ30184.1 - 0.0011 19.4 0.0 0.0014 19.0 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ30184.1 - 0.0029 17.9 0.0 0.0054 17.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ30184.1 - 0.0084 15.8 0.1 0.017 14.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 CTQ30184.1 - 0.015 14.9 0.6 0.071 12.7 0.6 2.3 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 CTQ30184.1 - 0.016 15.7 0.1 0.023 15.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 CTQ30184.1 - 0.024 14.4 0.0 0.036 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 CTQ30184.1 - 0.046 12.5 5.5 0.82 8.4 0.8 2.5 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA_28 PF13521.6 CTQ30184.1 - 0.068 13.4 0.3 2.2 8.5 0.2 2.4 2 1 1 3 3 3 0 AAA domain AAA_14 PF13173.6 CTQ30184.1 - 0.084 12.9 0.0 0.27 11.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_3 PF07726.11 CTQ30184.1 - 0.091 12.6 0.0 0.2 11.5 0.0 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 CTQ30184.1 - 0.12 12.8 0.0 0.42 11.0 0.0 1.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 CTQ30184.1 - 0.24 11.3 0.6 0.44 10.4 0.6 1.4 1 0 0 1 1 1 0 NACHT domain Na_Ca_ex PF01699.24 CTQ30185.1 - 4.7e-55 185.7 32.9 2.6e-28 98.9 13.7 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Glyco_transf_6 PF03414.13 CTQ30185.1 - 0.13 11.0 0.0 0.22 10.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 6 DUF4401 PF14351.6 CTQ30185.1 - 0.41 9.9 28.0 1.9 7.7 28.0 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4401) SIT PF15330.6 CTQ30185.1 - 0.68 10.4 0.0 0.68 10.4 0.0 2.8 4 0 0 4 4 4 0 SHP2-interacting transmembrane adaptor protein, SIT SIS PF01380.22 CTQ30186.1 - 1.4e-34 118.8 0.1 1.8e-33 115.2 0.0 2.2 2 0 0 2 2 2 1 SIS domain CBS PF00571.28 CTQ30186.1 - 1.6e-14 54.1 2.2 2.4e-06 27.9 0.3 3.3 3 0 0 3 3 3 2 CBS domain SIS_2 PF13580.6 CTQ30186.1 - 8.6e-05 22.6 1.6 0.0027 17.7 0.0 2.3 1 1 1 2 2 2 1 SIS domain DUF2529 PF10740.9 CTQ30186.1 - 0.0045 16.6 0.0 0.0069 16.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2529) Hydrolase_3 PF08282.12 CTQ30187.1 - 1.2e-11 44.8 0.0 2.4e-09 37.3 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ30187.1 - 0.00035 20.9 0.0 0.0043 17.4 0.0 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CTQ30187.1 - 0.00048 20.3 0.1 0.011 15.9 0.0 2.5 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase S6PP PF05116.13 CTQ30187.1 - 0.091 12.3 0.0 0.41 10.1 0.0 1.8 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase LptC PF06835.13 CTQ30188.1 - 5.9e-56 188.8 0.6 6.6e-56 188.6 0.6 1.0 1 0 0 1 1 1 1 Lipopolysaccharide-assembly, LptC-related OstA PF03968.14 CTQ30189.1 - 6.6e-33 113.3 2.2 8.3e-33 113.0 2.2 1.1 1 0 0 1 1 1 1 OstA-like protein LptC PF06835.13 CTQ30189.1 - 6e-06 26.0 0.3 0.023 14.3 0.1 2.2 2 0 0 2 2 2 2 Lipopolysaccharide-assembly, LptC-related Big_9 PF17963.1 CTQ30189.1 - 0.048 14.4 1.0 0.099 13.4 0.6 1.7 1 1 0 1 1 1 0 Bacterial Ig domain ABC_tran PF00005.27 CTQ30190.1 - 6.3e-34 117.4 0.0 1e-33 116.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 CTQ30190.1 - 5.4e-08 32.6 0.0 1.1e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 CTQ30190.1 - 0.00045 20.1 2.1 0.16 11.8 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30190.1 - 0.01 15.3 0.1 3.5 7.0 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain T2SSE PF00437.20 CTQ30190.1 - 0.021 13.9 0.0 0.031 13.3 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_23 PF13476.6 CTQ30190.1 - 0.052 14.1 0.2 0.1 13.1 0.0 1.5 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 CTQ30190.1 - 0.095 13.0 0.2 0.88 9.8 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Sigma54_DBD PF04552.13 CTQ30191.1 - 4.2e-71 237.8 0.3 8.1e-71 236.9 0.3 1.5 1 0 0 1 1 1 1 Sigma-54, DNA binding domain Sigma54_CBD PF04963.13 CTQ30191.1 - 6.6e-62 208.5 0.4 6.6e-62 208.5 0.4 1.9 2 0 0 2 2 2 1 Sigma-54 factor, core binding domain Sigma54_AID PF00309.20 CTQ30191.1 - 4e-16 58.6 20.9 1.3e-15 57.0 20.9 2.0 1 0 0 1 1 1 1 Sigma-54 factor, Activator interacting domain (AID) Ribosomal_S30AE PF02482.19 CTQ30192.1 - 3.9e-26 91.6 0.4 4.4e-26 91.5 0.4 1.0 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein P2_N PF18628.1 CTQ30192.1 - 0.083 12.6 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Viral coat protein P2 N-terminal domain PTS_EIIA_2 PF00359.22 CTQ30193.1 - 2.8e-37 127.8 0.1 3.2e-37 127.6 0.1 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATP_bind_2 PF03668.15 CTQ30194.1 - 5.2e-146 485.3 0.0 5.9e-146 485.1 0.0 1.0 1 0 0 1 1 1 1 P-loop ATPase protein family AAA_18 PF13238.6 CTQ30194.1 - 0.032 14.8 0.0 0.46 11.0 0.1 2.6 2 1 0 2 2 2 0 AAA domain CPT PF07931.12 CTQ30194.1 - 0.047 13.5 0.0 1.6 8.5 0.0 2.2 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_28 PF13521.6 CTQ30194.1 - 0.06 13.6 0.0 0.12 12.6 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 CTQ30194.1 - 0.081 13.2 0.0 0.21 11.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CTQ30194.1 - 0.11 12.6 0.0 0.42 10.8 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CTQ30194.1 - 0.12 12.7 0.2 0.31 11.4 0.2 1.8 1 1 0 1 1 1 0 AAA ATPase domain FtsK_SpoIIIE PF01580.18 CTQ30194.1 - 0.13 11.6 0.2 0.13 11.6 0.2 1.5 2 0 0 2 2 2 0 FtsK/SpoIIIE family PTS-HPr PF00381.19 CTQ30195.1 - 3.6e-22 78.4 0.8 4e-22 78.3 0.8 1.0 1 0 0 1 1 1 1 PTS HPr component phosphorylation site Transgly PF00912.22 CTQ30196.1 - 4.9e-51 172.7 0.0 6e-51 172.4 0.0 1.1 1 0 0 1 1 1 1 Transglycosylase DJ-1_PfpI PF01965.24 CTQ30197.1 - 0.00093 19.0 0.0 0.0031 17.3 0.0 1.8 1 1 0 1 1 1 1 DJ-1/PfpI family Catalase_C PF18011.1 CTQ30197.1 - 0.07 12.8 0.0 0.16 11.6 0.0 1.6 2 0 0 2 2 2 0 C-terminal domain found in long catalases HKR_ArcB_TM PF18415.1 CTQ30198.1 - 3.3e-30 104.7 6.4 3.3e-30 104.7 6.4 1.8 1 1 1 2 2 2 1 Histidine kinase receptor ArcB trans-membrane domain HATPase_c PF02518.26 CTQ30198.1 - 1.1e-29 103.2 0.0 2.4e-29 102.1 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 CTQ30198.1 - 5.6e-22 78.0 0.3 1.2e-21 76.9 0.3 1.6 1 0 0 1 1 1 1 Response regulator receiver domain PAS PF00989.25 CTQ30198.1 - 7.6e-18 64.6 0.0 2.3e-17 63.0 0.0 1.9 1 0 0 1 1 1 1 PAS fold HisKA PF00512.25 CTQ30198.1 - 3.4e-16 59.0 2.1 2.5e-15 56.2 0.1 2.8 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 CTQ30198.1 - 1.2e-14 54.4 0.0 2.8e-14 53.3 0.0 1.7 1 0 0 1 1 1 1 PAS fold Hpt PF01627.23 CTQ30198.1 - 1.7e-11 44.2 1.2 1.3e-10 41.3 0.0 2.8 2 1 0 2 2 2 1 Hpt domain PAS_9 PF13426.7 CTQ30198.1 - 6.1e-06 26.4 0.0 1.5e-05 25.2 0.0 1.7 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 CTQ30198.1 - 0.00041 20.2 0.0 0.0011 18.9 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCB1 PF12046.8 CTQ30198.1 - 0.00069 19.0 0.6 0.0013 18.1 0.6 1.4 1 0 0 1 1 1 1 Cofactor assembly of complex C subunit B PAS_8 PF13188.7 CTQ30198.1 - 0.0044 17.0 0.0 0.019 15.0 0.0 2.2 2 0 0 2 2 2 1 PAS domain Atg14 PF10186.9 CTQ30198.1 - 1.3 8.1 5.2 2.1 7.3 5.2 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ING PF12998.7 CTQ30198.1 - 1.5 9.5 9.5 1.9 9.2 7.2 2.3 2 0 0 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding UxuA PF03786.13 CTQ30199.1 - 1.6e-157 523.8 0.0 1.8e-157 523.6 0.0 1.0 1 0 0 1 1 1 1 D-mannonate dehydratase (UxuA) AP_endonuc_2 PF01261.24 CTQ30199.1 - 4.6e-11 42.6 0.0 6.5e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel ADH_N PF08240.12 CTQ30200.1 - 8.6e-35 118.9 1.9 1.3e-34 118.4 1.9 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 CTQ30200.1 - 1.2e-15 57.6 0.0 2.4e-15 56.7 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 CTQ30200.1 - 7e-06 25.7 0.0 1.3e-05 24.7 0.0 1.5 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 CTQ30200.1 - 0.00041 21.4 0.0 0.00086 20.4 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Shikimate_DH PF01488.20 CTQ30200.1 - 0.0024 18.0 0.0 0.0052 16.8 0.0 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.18 CTQ30200.1 - 0.0029 17.8 0.2 0.012 15.9 0.2 1.9 1 1 1 2 2 2 1 TrkA-N domain DapB_N PF01113.20 CTQ30200.1 - 0.025 14.7 0.0 0.044 13.9 0.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus PALP PF00291.25 CTQ30200.1 - 0.092 12.1 0.1 0.14 11.6 0.1 1.2 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme NADH_4Fe-4S PF10589.9 CTQ30200.1 - 0.11 12.6 1.0 0.35 11.0 1.0 1.8 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MFS_1 PF07690.16 CTQ30201.1 - 5.9e-64 216.2 65.4 2.1e-56 191.3 41.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ30201.1 - 5.4e-10 38.7 35.0 7.1e-10 38.3 35.0 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter OATP PF03137.20 CTQ30201.1 - 0.00048 18.6 29.2 0.00098 17.5 10.4 3.5 1 1 2 3 3 3 3 Organic Anion Transporter Polypeptide (OATP) family MFS_4 PF06779.14 CTQ30201.1 - 0.00053 19.4 32.5 0.028 13.7 32.5 2.0 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB DUF4381 PF14316.6 CTQ30201.1 - 0.29 11.4 0.0 0.29 11.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Radical_SAM_C PF16199.5 CTQ30202.1 - 3.6e-17 62.1 0.0 8.2e-17 61.0 0.0 1.6 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 CTQ30202.1 - 1.5e-15 57.9 0.0 2.4e-15 57.3 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily zf-4CXXC_R1 PF10497.9 CTQ30202.1 - 0.05 13.8 0.0 0.13 12.5 0.0 1.7 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 GATase_2 PF00310.21 CTQ30204.1 - 2.5e-176 586.5 0.0 3.3e-176 586.1 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Glu_synthase PF01645.17 CTQ30204.1 - 5.4e-158 525.9 0.0 9.8e-158 525.1 0.0 1.4 2 0 0 2 2 2 1 Conserved region in glutamate synthase Glu_syn_central PF04898.14 CTQ30204.1 - 5e-105 351.0 0.1 1e-104 350.0 0.0 1.5 2 0 0 2 2 2 1 Glutamate synthase central domain GXGXG PF01493.19 CTQ30204.1 - 4.3e-75 251.5 5.7 8.6e-75 250.5 5.7 1.5 1 0 0 1 1 1 1 GXGXG motif FMN_dh PF01070.18 CTQ30204.1 - 1.9e-05 23.8 0.6 0.00011 21.4 0.3 2.0 2 0 0 2 2 2 1 FMN-dependent dehydrogenase Fer4_20 PF14691.6 CTQ30205.1 - 4e-38 129.6 0.4 6.5e-38 129.0 0.4 1.3 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.14 CTQ30205.1 - 2e-29 102.8 5.3 7.9e-24 84.4 2.6 1.9 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ30205.1 - 3.3e-11 43.0 0.4 0.00012 21.4 0.0 2.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ30205.1 - 7.7e-11 42.4 3.4 0.00038 21.0 0.2 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CTQ30205.1 - 6.6e-09 35.9 0.1 1.6e-08 34.7 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 CTQ30205.1 - 1.4e-06 27.9 0.1 2.5e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 CTQ30205.1 - 3.3e-06 26.5 0.0 7.3e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 CTQ30205.1 - 4e-06 26.4 0.1 1.6e-05 24.4 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 CTQ30205.1 - 8.9e-06 26.1 0.7 0.07 13.6 0.1 2.8 2 1 0 2 2 2 2 Putative NAD(P)-binding FAD_binding_2 PF00890.24 CTQ30205.1 - 1.2e-05 24.6 0.8 0.0017 17.5 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 CTQ30205.1 - 2.1e-05 23.4 0.1 4.6e-05 22.3 0.1 1.5 1 0 0 1 1 1 1 HI0933-like protein FMO-like PF00743.19 CTQ30205.1 - 2.4e-05 23.0 0.1 0.0058 15.1 0.0 2.1 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like 2-Hacid_dh_C PF02826.19 CTQ30205.1 - 5.9e-05 22.5 0.0 0.0016 17.8 0.0 2.7 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DAO PF01266.24 CTQ30205.1 - 0.00014 21.6 0.3 0.0025 17.5 0.0 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase Shikimate_DH PF01488.20 CTQ30205.1 - 0.0004 20.5 0.0 0.83 9.7 0.0 2.9 3 0 0 3 3 3 2 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 CTQ30205.1 - 0.00088 19.8 0.2 4 8.1 0.0 3.6 4 1 1 5 5 4 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_9 PF13454.6 CTQ30205.1 - 0.0023 18.0 0.6 0.065 13.2 0.2 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding K_oxygenase PF13434.6 CTQ30205.1 - 0.0035 16.6 0.0 2.9 6.9 0.0 2.7 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 CTQ30205.1 - 0.004 16.5 1.4 0.4 9.9 0.0 2.8 2 1 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain IlvN PF07991.12 CTQ30205.1 - 0.01 15.4 0.1 0.43 10.1 0.0 2.3 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain AdoHcyase_NAD PF00670.21 CTQ30205.1 - 0.01 15.9 0.8 1.8 8.6 0.0 2.4 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 CTQ30205.1 - 0.012 15.6 0.0 0.024 14.6 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Fer4_7 PF12838.7 CTQ30205.1 - 0.032 14.8 2.6 0.11 13.1 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Amino_oxidase PF01593.24 CTQ30205.1 - 0.068 12.4 0.0 0.32 10.2 0.0 2.0 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase GIDA PF01134.22 CTQ30205.1 - 0.11 11.6 0.2 0.18 10.9 0.2 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A Lycopene_cycl PF05834.12 CTQ30205.1 - 0.12 11.4 0.4 0.18 10.8 0.4 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein 3HCDH_N PF02737.18 CTQ30205.1 - 0.14 12.0 0.1 0.27 11.1 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XdhC_C PF13478.6 CTQ30205.1 - 0.15 12.5 0.1 1.9 9.0 0.0 2.2 2 0 0 2 2 2 0 XdhC Rossmann domain NanE PF04131.14 CTQ30206.1 - 6.5e-84 279.9 0.0 7.7e-84 279.7 0.0 1.0 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase IMPDH PF00478.25 CTQ30206.1 - 0.058 12.4 1.6 0.62 9.0 0.0 2.4 3 0 0 3 3 3 0 IMP dehydrogenase / GMP reductase domain Molybdopterin_N PF18364.1 CTQ30206.1 - 0.17 11.9 0.1 1.2 9.2 0.0 2.2 2 0 0 2 2 2 0 Molybdopterin oxidoreductase N-terminal domain SspB PF04386.13 CTQ30207.1 - 1.8e-43 148.2 0.0 2e-43 148.1 0.0 1.0 1 0 0 1 1 1 1 Stringent starvation protein B GST_N PF02798.20 CTQ30208.1 - 5.3e-22 77.9 0.0 6.1e-20 71.4 0.0 2.2 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 CTQ30208.1 - 8.8e-17 61.3 0.0 1.6e-16 60.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ30208.1 - 3e-13 49.9 0.1 6.3e-13 48.8 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 CTQ30208.1 - 3.4e-12 46.4 0.0 5e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 CTQ30208.1 - 5.3e-08 32.8 0.1 1.1e-07 31.7 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 CTQ30208.1 - 0.023 14.9 0.0 0.046 13.9 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin GST_C_5 PF16865.5 CTQ30208.1 - 0.084 13.5 0.0 0.21 12.2 0.0 1.6 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Ribosomal_S9 PF00380.19 CTQ30209.1 - 6.6e-47 159.0 1.4 7.5e-47 158.8 1.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Flg_hook PF02120.16 CTQ30209.1 - 0.13 12.1 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK Ribosomal_L13 PF00572.18 CTQ30210.1 - 4.1e-57 191.8 0.4 5.5e-57 191.4 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L13 AFG1_ATPase PF03969.16 CTQ30211.1 - 1.7e-160 533.8 0.0 2e-160 533.6 0.0 1.0 1 0 0 1 1 1 1 AFG1-like ATPase DUF4262 PF14081.6 CTQ30211.1 - 0.15 12.3 0.1 0.25 11.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4262) DUF1043 PF06295.12 CTQ30213.1 - 1.8e-47 160.3 0.1 2e-47 160.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1043) DUF3958 PF13125.6 CTQ30213.1 - 0.00091 19.4 4.3 0.0011 19.1 4.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3958) HemX PF04375.14 CTQ30213.1 - 0.0011 18.3 0.2 0.0014 18.0 0.2 1.1 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase Apolipoprotein PF01442.18 CTQ30213.1 - 0.011 15.6 4.7 0.017 15.0 4.7 1.3 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain HrpB7 PF09486.10 CTQ30213.1 - 0.027 14.8 2.1 0.034 14.5 2.1 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) MctB PF11382.8 CTQ30213.1 - 0.045 13.5 0.1 0.069 12.9 0.1 1.2 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB KAP PF05804.12 CTQ30213.1 - 0.067 11.3 0.1 0.075 11.2 0.1 1.0 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) KRAP_IP3R_bind PF14722.6 CTQ30213.1 - 0.072 12.8 0.3 0.086 12.6 0.3 1.1 1 0 0 1 1 1 0 Ki-ras-induced actin-interacting protein-IP3R-interacting domain AAA_9 PF12781.7 CTQ30213.1 - 0.076 12.1 0.7 0.1 11.7 0.7 1.1 1 0 0 1 1 1 0 ATP-binding dynein motor region Exonuc_VII_L PF02601.15 CTQ30213.1 - 0.079 12.5 0.4 0.09 12.3 0.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF2501 PF10696.9 CTQ30213.1 - 0.09 13.1 0.0 0.15 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2501) DUF4514 PF14986.6 CTQ30213.1 - 0.17 11.9 0.6 0.27 11.2 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4514) YtxH PF12732.7 CTQ30213.1 - 9.3 6.9 5.9 52 4.5 5.9 2.3 1 1 0 1 1 1 0 YtxH-like protein Trypsin_2 PF13365.6 CTQ30214.1 - 4.4e-30 105.6 0.1 7e-30 104.9 0.1 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 CTQ30214.1 - 3.4e-28 97.8 0.3 5.4e-17 61.9 0.0 2.6 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 CTQ30214.1 - 4.1e-26 91.2 6.7 7.7e-15 55.0 0.1 3.2 3 0 0 3 3 3 2 PDZ domain PDZ_6 PF17820.1 CTQ30214.1 - 4.1e-19 68.2 2.2 6.5e-09 35.5 0.0 2.8 3 0 0 3 3 3 2 PDZ domain Trypsin PF00089.26 CTQ30214.1 - 1.4e-15 57.7 0.0 2.3e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 Trypsin Tricorn_PDZ PF14685.6 CTQ30214.1 - 0.0073 16.2 0.4 0.16 12.0 0.1 2.8 2 0 0 2 2 2 1 Tricorn protease PDZ domain Peptidase_S46 PF10459.9 CTQ30214.1 - 0.0078 14.9 0.1 0.19 10.3 0.7 2.0 2 0 0 2 2 2 1 Peptidase S46 GRASP55_65 PF04495.14 CTQ30214.1 - 0.032 14.6 0.0 3.6 7.9 0.0 2.4 1 1 1 2 2 2 0 GRASP55/65 PDZ-like domain LSM PF01423.22 CTQ30214.1 - 0.11 12.2 0.0 0.28 10.9 0.0 1.6 1 0 0 1 1 1 0 LSM domain Trypsin_2 PF13365.6 CTQ30215.1 - 1.9e-30 106.8 0.3 2.8e-30 106.2 0.3 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 CTQ30215.1 - 3e-17 63.2 0.0 6e-17 62.2 0.0 1.4 1 1 0 1 1 1 1 Trypsin PDZ_2 PF13180.6 CTQ30215.1 - 3.9e-14 52.7 1.0 1.8e-13 50.6 0.2 2.3 2 0 0 2 2 2 1 PDZ domain PDZ PF00595.24 CTQ30215.1 - 2.3e-12 47.1 1.5 2.3e-12 47.1 1.5 2.5 3 0 0 3 3 3 1 PDZ domain PDZ_6 PF17820.1 CTQ30215.1 - 1.1e-09 38.0 0.8 1.1e-09 38.0 0.8 2.2 2 0 0 2 2 2 1 PDZ domain Peptidase_S46 PF10459.9 CTQ30215.1 - 0.17 10.5 1.4 0.7 8.5 0.5 1.9 2 0 0 2 2 2 0 Peptidase S46 CitG PF01874.16 CTQ30216.1 - 3.3e-07 30.2 0.8 0.0011 18.6 0.1 3.2 1 1 1 2 2 2 2 ATP:dephospho-CoA triphosphoribosyl transferase OAD_beta PF03977.13 CTQ30217.1 - 2.3e-08 33.5 1.8 2.4e-08 33.4 1.8 1.0 1 0 0 1 1 1 1 Na+-transporting oxaloacetate decarboxylase beta subunit PYC_OADA PF02436.18 CTQ30218.1 - 1.3e-38 132.8 0.0 1.7e-38 132.3 0.0 1.1 1 0 0 1 1 1 1 Conserved carboxylase domain Biotin_lipoyl PF00364.22 CTQ30218.1 - 3.5e-18 65.2 0.3 3.5e-18 65.2 0.3 1.9 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 CTQ30218.1 - 1e-11 44.5 2.0 1.3e-06 28.2 0.0 3.1 2 1 1 3 3 3 2 Biotin-lipoyl like HlyD_3 PF13437.6 CTQ30218.1 - 8e-06 26.5 0.6 0.096 13.4 0.0 2.6 2 0 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 CTQ30218.1 - 7.5e-05 22.1 0.5 0.23 10.7 0.0 2.3 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion PTS_EIIA_1 PF00358.20 CTQ30218.1 - 0.0021 17.8 0.3 6.2 6.6 0.0 3.2 2 1 1 3 3 3 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Peptidase_M23 PF01551.22 CTQ30218.1 - 0.0034 17.5 0.1 0.0089 16.2 0.1 1.7 1 0 0 1 1 1 1 Peptidase family M23 FliO PF04347.13 CTQ30218.1 - 0.12 12.7 0.0 0.26 11.6 0.0 1.6 1 0 0 1 1 1 0 Flagellar biosynthesis protein, FliO Siah-Interact_N PF09032.11 CTQ30218.1 - 0.3 11.4 1.3 32 4.9 0.0 3.0 3 0 0 3 3 3 0 Siah interacting protein, N terminal OAD_gamma PF04277.13 CTQ30219.1 - 1.3e-16 60.9 0.2 1.6e-16 60.6 0.2 1.1 1 0 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain RhodobacterPufX PF11511.8 CTQ30219.1 - 0.006 16.2 1.8 0.0089 15.6 1.8 1.2 1 0 0 1 1 1 1 Intrinsic membrane protein PufX ABC2_membrane_3 PF12698.7 CTQ30219.1 - 0.63 9.1 3.4 0.73 8.9 3.4 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Fumerase_C PF05683.12 CTQ30220.1 - 7e-38 130.0 0.0 8.6e-38 129.7 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus Yqai PF09466.10 CTQ30220.1 - 0.12 12.7 0.1 0.28 11.5 0.0 1.7 2 0 0 2 2 2 0 Hypothetical protein Yqai Fumerase PF05681.14 CTQ30221.1 - 8.3e-77 258.2 0.0 9.4e-77 258.1 0.0 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) CitMHS PF03600.16 CTQ30222.1 - 4.2e-48 164.1 51.4 1.6e-32 112.9 19.5 2.1 1 1 1 2 2 2 2 Citrate transporter Na_sulph_symp PF00939.19 CTQ30222.1 - 1.5e-32 113.3 44.1 8e-30 104.3 44.1 3.0 1 1 0 1 1 1 1 Sodium:sulfate symporter transmembrane region DctM PF06808.12 CTQ30222.1 - 4.9e-09 35.5 47.5 3.4e-08 32.7 19.9 2.1 1 1 0 2 2 2 2 Tripartite ATP-independent periplasmic transporter, DctM component OCIA PF07051.11 CTQ30222.1 - 0.6 10.2 2.8 1.1 9.3 0.2 2.7 3 0 0 3 3 3 0 Ovarian carcinoma immunoreactive antigen (OCIA) FCD PF07729.12 CTQ30223.1 - 4.8e-22 78.7 7.4 8.5e-22 77.9 7.4 1.4 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 CTQ30223.1 - 3.7e-14 52.1 0.7 1.2e-13 50.4 0.8 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_15 PF12324.8 CTQ30223.1 - 0.0016 18.4 0.2 1.1 9.3 0.1 2.9 2 1 0 2 2 2 2 Helix-turn-helix domain of alkylmercury lyase HTH_DeoR PF08220.12 CTQ30223.1 - 0.014 15.2 0.4 0.26 11.1 0.0 2.8 2 1 1 3 3 3 0 DeoR-like helix-turn-helix domain HTH_24 PF13412.6 CTQ30223.1 - 0.018 14.6 0.2 0.1 12.2 0.1 2.3 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding Mnd1 PF03962.15 CTQ30223.1 - 0.078 13.3 0.0 0.36 11.1 0.0 2.0 2 0 0 2 2 2 0 Mnd1 HTH domain Sigma70_r4 PF04545.16 CTQ30223.1 - 0.15 11.6 1.7 0.46 10.1 0.1 2.5 3 0 0 3 3 3 0 Sigma-70, region 4 GntR PF00392.21 CTQ30224.1 - 7e-17 60.8 0.4 1.2e-16 60.1 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 CTQ30224.1 - 3.9e-07 29.5 0.0 1.1e-06 28.1 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 CTQ30224.1 - 3.4e-05 23.6 1.0 0.00052 19.8 0.1 2.9 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ30224.1 - 7e-05 22.7 0.3 0.00058 19.8 0.1 2.4 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 CTQ30224.1 - 0.00013 21.8 0.0 0.00033 20.6 0.0 1.7 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.16 CTQ30224.1 - 0.00018 21.0 0.2 0.00081 18.9 0.1 2.3 2 0 0 2 2 2 1 Sigma-70, region 4 FCD PF07729.12 CTQ30224.1 - 0.00034 21.1 0.3 0.00072 20.0 0.3 1.7 1 0 0 1 1 1 1 FCD domain MarR PF01047.22 CTQ30224.1 - 0.00035 20.4 0.1 0.0011 18.9 0.0 1.9 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 CTQ30224.1 - 0.00054 19.8 0.0 0.0011 18.8 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FaeA PF04703.12 CTQ30224.1 - 0.0011 19.3 0.2 0.008 16.5 0.0 2.3 2 0 0 2 2 2 1 FaeA-like protein HTH_36 PF13730.6 CTQ30224.1 - 0.0039 17.1 0.0 0.024 14.6 0.0 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_DeoR PF08220.12 CTQ30224.1 - 0.011 15.5 0.0 0.028 14.2 0.0 1.8 1 1 0 1 1 1 0 DeoR-like helix-turn-helix domain MarR_2 PF12802.7 CTQ30224.1 - 0.012 15.5 0.4 0.044 13.7 0.0 2.1 2 0 0 2 2 2 0 MarR family EAP30 PF04157.16 CTQ30224.1 - 0.016 14.5 0.1 0.029 13.7 0.1 1.4 1 0 0 1 1 1 0 EAP30/Vps36 family HTH_29 PF13551.6 CTQ30224.1 - 0.017 15.1 0.0 0.053 13.5 0.0 1.9 1 0 0 1 1 1 0 Winged helix-turn helix HTH_28 PF13518.6 CTQ30224.1 - 0.019 15.1 0.0 0.065 13.4 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 CTQ30224.1 - 0.035 13.9 0.3 0.094 12.6 0.1 1.9 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Rrf2 PF02082.20 CTQ30224.1 - 0.039 14.3 0.1 0.26 11.7 0.1 2.2 2 0 0 2 2 2 0 Transcriptional regulator HTH_54 PF18607.1 CTQ30224.1 - 0.1 12.7 0.0 0.28 11.3 0.0 1.7 2 0 0 2 2 1 0 ParA helix turn helix domain HTH_23 PF13384.6 CTQ30224.1 - 0.12 12.2 0.4 0.44 10.4 0.1 2.2 2 1 0 2 2 2 0 Homeodomain-like domain Ldh_1_C PF02866.18 CTQ30225.1 - 1.2e-51 175.0 0.0 1.7e-51 174.4 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 CTQ30225.1 - 4.6e-46 156.4 0.6 6.5e-46 155.9 0.6 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 CTQ30225.1 - 0.2 12.1 1.2 0.38 11.2 0.3 2.0 2 1 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain Arg_repressor PF01316.21 CTQ30226.1 - 2.4e-26 91.3 0.1 3.5e-26 90.7 0.1 1.3 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain Arg_repressor_C PF02863.18 CTQ30226.1 - 4.2e-21 74.6 0.2 8.1e-21 73.6 0.2 1.5 1 0 0 1 1 1 1 Arginine repressor, C-terminal domain DUF4911 PF16256.5 CTQ30226.1 - 0.086 12.8 0.0 0.2 11.7 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4911) DUF1471 PF07338.13 CTQ30228.1 - 8.4e-22 76.9 0.1 1.2e-21 76.4 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF1471 PF07338.13 CTQ30229.1 - 4.7e-23 80.9 0.1 7.3e-23 80.3 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) Barstar PF01337.18 CTQ30230.1 - 9e-06 25.6 0.6 1.2e-05 25.2 0.6 1.3 1 1 0 1 1 1 1 Barstar (barnase inhibitor) FUSC PF04632.12 CTQ30231.1 - 3.1e-139 465.5 28.7 3.5e-139 465.3 28.7 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family FUSC_2 PF13515.6 CTQ30231.1 - 2.7e-12 46.9 40.4 8.8e-12 45.3 17.6 3.0 2 1 1 3 3 3 2 Fusaric acid resistance protein-like DUF2470 PF10615.9 CTQ30231.1 - 0.17 12.5 0.1 0.46 11.2 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2470) Biotin_lipoyl_2 PF13533.6 CTQ30232.1 - 6.3e-22 77.2 3.2 4.4e-19 68.0 4.4 2.7 2 0 0 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 CTQ30232.1 - 1.9e-15 57.4 2.1 2.7e-10 40.9 0.0 2.9 2 1 1 3 3 3 2 HlyD family secretion protein HlyD_D23 PF16576.5 CTQ30232.1 - 5.5e-15 55.2 5.8 7.4e-15 54.7 3.7 2.1 2 1 0 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 CTQ30232.1 - 2.2e-09 37.1 0.0 5.4e-09 35.8 0.0 1.6 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 CTQ30232.1 - 0.0062 16.3 0.0 0.4 10.6 0.1 2.4 2 0 0 2 2 2 1 Biotin-requiring enzyme DUF1656 PF07869.12 CTQ30233.1 - 1.2e-20 73.3 11.3 1.4e-20 73.0 11.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1656) LysR_substrate PF03466.20 CTQ30234.1 - 1.2e-41 142.4 0.0 1.7e-41 141.9 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ30234.1 - 7.8e-20 70.6 1.0 7.8e-20 70.6 1.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ30234.1 - 0.076 12.9 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 MarR family PmbA_TldD PF01523.16 CTQ30235.1 - 3.2e-68 230.6 0.7 5e-68 230.0 0.7 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase DUF3971 PF13116.6 CTQ30236.1 - 1.2e-98 330.3 0.4 1.5e-97 326.7 0.3 2.2 2 0 0 2 2 2 1 Protein of unknown function AsmA_2 PF13502.6 CTQ30236.1 - 1e-61 208.4 9.1 7e-60 202.4 0.8 4.1 3 1 1 4 4 4 3 AsmA-like C-terminal region AsmA_1 PF13109.6 CTQ30236.1 - 0.2 11.1 0.0 0.81 9.1 0.0 1.9 2 0 0 2 2 2 0 AsmA-like C-terminal region RNase_E_G PF10150.9 CTQ30237.1 - 2.3e-102 342.0 2.7 2.4e-102 342.0 1.8 1.4 2 0 0 2 2 2 1 Ribonuclease E/G family S1 PF00575.23 CTQ30237.1 - 3e-07 30.7 0.6 1.6e-06 28.4 0.0 2.3 2 0 0 2 2 2 1 S1 RNA binding domain HARE-HTH PF05066.13 CTQ30237.1 - 0.13 12.6 0.0 0.6 10.5 0.0 2.2 1 0 0 1 1 1 0 HB1, ASXL, restriction endonuclease HTH domain Maf PF02545.14 CTQ30238.1 - 1.4e-59 200.7 0.0 1.5e-59 200.5 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein MreD PF04093.12 CTQ30239.1 - 3.3e-45 154.0 19.8 3.7e-45 153.9 19.8 1.0 1 0 0 1 1 1 1 rod shape-determining protein MreD MreC PF04085.14 CTQ30240.1 - 7.6e-37 126.5 0.3 1.1e-36 126.0 0.3 1.2 1 0 0 1 1 1 1 rod shape-determining protein MreC MreB_Mbl PF06723.13 CTQ30241.1 - 3.1e-150 499.5 3.6 3.8e-150 499.2 3.6 1.0 1 0 0 1 1 1 1 MreB/Mbl protein HSP70 PF00012.20 CTQ30241.1 - 3.8e-13 48.5 0.3 8.2e-13 47.4 0.1 1.6 1 1 0 2 2 2 1 Hsp70 protein FtsA PF14450.6 CTQ30241.1 - 4.6e-11 43.1 0.2 1.5e-10 41.4 0.0 1.9 2 0 0 2 2 2 1 Cell division protein FtsA Actin PF00022.19 CTQ30241.1 - 5.1e-10 38.5 0.1 3.5e-06 25.9 0.0 2.2 1 1 0 2 2 2 2 Actin PilM_2 PF11104.8 CTQ30241.1 - 2.4e-07 30.1 0.1 0.0053 15.8 0.0 2.4 3 0 0 3 3 3 2 Type IV pilus assembly protein PilM; Ppx-GppA PF02541.16 CTQ30241.1 - 0.00058 19.4 0.1 0.0011 18.5 0.1 1.4 1 0 0 1 1 1 1 Ppx/GppA phosphatase family EutA PF06277.11 CTQ30241.1 - 0.0026 16.7 0.2 0.0041 16.0 0.2 1.3 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutA DDR PF08841.10 CTQ30241.1 - 0.0042 16.1 0.5 0.011 14.7 0.1 1.8 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain EAL PF00563.20 CTQ30242.1 - 4.2e-34 118.1 0.1 7.9e-34 117.2 0.1 1.4 1 0 0 1 1 1 1 EAL domain GAPES4 PF17157.4 CTQ30242.1 - 4.5e-31 107.1 0.1 1.1e-30 105.9 0.1 1.7 1 0 0 1 1 1 1 Gammaproteobacterial periplasmic sensor domain GGDEF PF00990.21 CTQ30242.1 - 5.9e-26 91.1 0.0 9.7e-26 90.4 0.0 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Oxidored_molyb PF00174.19 CTQ30243.1 - 7.4e-30 103.8 0.0 1.2e-29 103.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Ferric_reduct PF01794.19 CTQ30244.1 - 7.7e-16 58.3 7.8 7.7e-16 58.3 7.8 2.3 2 1 1 3 3 3 2 Ferric reductase like transmembrane component DHquinase_II PF01220.19 CTQ30245.1 - 5.8e-61 204.2 0.2 6.5e-61 204.0 0.2 1.0 1 0 0 1 1 1 1 Dehydroquinase class II Rotavirus_VP1 PF12289.8 CTQ30245.1 - 0.099 11.7 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP1 C-terminal domain Biotin_lipoyl PF00364.22 CTQ30246.1 - 3.1e-25 87.8 0.8 3.1e-25 87.8 0.8 1.7 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 CTQ30246.1 - 4.3e-05 23.2 1.1 0.069 13.0 0.2 2.6 1 1 1 2 2 2 2 Biotin-lipoyl like RnfC_N PF13375.6 CTQ30246.1 - 0.018 15.0 1.1 0.037 14.0 0.8 1.8 1 1 1 2 2 2 0 RnfC Barrel sandwich hybrid domain GCV_H PF01597.19 CTQ30246.1 - 0.062 13.2 0.7 0.15 12.0 0.2 1.9 2 1 0 2 2 2 0 Glycine cleavage H-protein Prot_ATP_OB_N PF17758.1 CTQ30246.1 - 0.16 11.6 0.4 2 8.2 0.1 2.4 2 1 0 2 2 2 0 Proteasomal ATPase OB N-terminal domain CPSase_L_D2 PF02786.17 CTQ30247.1 - 1.4e-85 286.1 0.1 2e-85 285.6 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 CTQ30247.1 - 3.4e-44 149.9 0.0 7.7e-44 148.7 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 CTQ30247.1 - 4.3e-38 129.7 0.0 9.2e-38 128.7 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp_3 PF02655.14 CTQ30247.1 - 4.3e-08 33.4 0.0 7.3e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 CTQ30247.1 - 4.9e-08 32.7 0.0 1.2e-07 31.5 0.0 1.6 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 CTQ30247.1 - 5e-08 32.7 0.0 1e-07 31.7 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 CTQ30247.1 - 0.0061 16.3 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_4 PF13535.6 CTQ30247.1 - 0.034 13.7 0.0 0.18 11.4 0.0 2.1 3 1 1 4 4 4 0 ATP-grasp domain DUF997 PF06196.12 CTQ30248.1 - 9.7e-29 99.2 3.8 1.1e-28 99.0 3.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF997) DUF4212 PF13937.6 CTQ30248.1 - 2.4 8.6 8.3 5.3 7.5 8.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4212) SSF PF00474.17 CTQ30249.1 - 5.6e-136 453.6 29.2 7.3e-136 453.2 29.2 1.1 1 0 0 1 1 1 1 Sodium:solute symporter family PrmA PF06325.13 CTQ30250.1 - 1.5e-105 352.9 0.0 1.6e-105 352.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 CTQ30250.1 - 1.6e-10 41.0 0.0 2.2e-10 40.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ30250.1 - 4.1e-10 39.5 0.0 6.1e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 CTQ30250.1 - 9.8e-09 35.8 0.0 2.4e-08 34.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CTQ30250.1 - 2.3e-06 27.5 0.0 4.1e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CTQ30250.1 - 3.6e-06 27.6 0.0 7.3e-06 26.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CTQ30250.1 - 5.7e-06 26.9 0.0 1.7e-05 25.3 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 CTQ30250.1 - 2.9e-05 23.8 0.0 7.4e-05 22.5 0.0 1.6 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 CTQ30250.1 - 3.1e-05 23.9 0.0 4.9e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 CTQ30250.1 - 0.00014 21.7 0.0 0.00018 21.3 0.0 1.2 1 0 0 1 1 1 1 DNA methylase Met_10 PF02475.16 CTQ30250.1 - 0.00017 21.4 0.0 0.00027 20.8 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_32 PF13679.6 CTQ30250.1 - 0.00021 21.3 0.0 0.00031 20.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 CTQ30250.1 - 0.0011 18.8 0.0 0.0016 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 CTQ30250.1 - 0.0025 17.5 0.7 0.011 15.4 0.6 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_9 PF08003.11 CTQ30250.1 - 0.004 16.1 0.0 0.006 15.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) CMAS PF02353.20 CTQ30250.1 - 0.0064 15.8 0.0 0.0093 15.3 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_15 PF09445.10 CTQ30250.1 - 0.02 14.5 0.0 0.028 14.0 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Ubie_methyltran PF01209.18 CTQ30250.1 - 0.11 11.9 0.0 0.24 10.7 0.0 1.5 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family Dus PF01207.17 CTQ30251.1 - 2.9e-116 387.9 0.0 3.2e-116 387.8 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 CTQ30251.1 - 1e-05 25.1 0.2 0.0012 18.4 0.1 1.8 1 1 1 2 2 2 2 Histidine biosynthesis protein DHO_dh PF01180.21 CTQ30251.1 - 2.5e-05 23.6 0.0 0.004 16.4 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase PEP_mutase PF13714.6 CTQ30251.1 - 0.0043 16.5 0.0 0.0087 15.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase NanE PF04131.14 CTQ30251.1 - 0.019 14.1 0.0 0.048 12.9 0.0 1.7 1 0 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase DUF561 PF04481.12 CTQ30251.1 - 0.024 13.8 0.0 0.034 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF561) NMO PF03060.15 CTQ30251.1 - 0.076 12.4 0.7 0.18 11.2 0.1 1.8 1 1 0 2 2 2 0 Nitronate monooxygenase Oxidored_FMN PF00724.20 CTQ30251.1 - 0.088 12.1 0.0 7.1 5.8 0.0 2.5 2 1 0 2 2 2 0 NADH:flavin oxidoreductase / NADH oxidase family HTH_8 PF02954.19 CTQ30252.1 - 2.6e-14 52.7 0.4 3.8e-14 52.2 0.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family Phage_NinH PF06322.11 CTQ30252.1 - 0.00053 19.8 0.1 0.0011 18.8 0.1 1.5 1 0 0 1 1 1 1 Phage NinH protein DUF3333 PF11812.8 CTQ30252.1 - 0.025 14.8 0.3 0.029 14.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) HTH_30 PF13556.6 CTQ30252.1 - 0.1 12.4 0.1 0.26 11.1 0.0 1.7 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Inhibitor_I24 PF10465.9 CTQ30252.1 - 0.14 12.1 0.1 0.17 11.9 0.1 1.1 1 0 0 1 1 1 0 PinA peptidase inhibitor TetR_C_2 PF08361.11 CTQ30253.1 - 1.2e-36 125.5 0.1 3e-36 124.2 0.1 1.6 2 0 0 2 2 2 1 MAATS-type transcriptional repressor, C-terminal region TetR_N PF00440.23 CTQ30253.1 - 5.4e-17 61.3 0.1 8.5e-17 60.7 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HlyD_D23 PF16576.5 CTQ30254.1 - 1.8e-15 56.7 0.7 8.7e-15 54.5 0.7 2.1 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 CTQ30254.1 - 1e-13 51.0 0.0 1.6e-13 50.3 0.0 1.5 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl_2 PF13533.6 CTQ30254.1 - 2.6e-12 46.4 0.3 3.6e-08 33.1 0.1 2.8 2 0 0 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 CTQ30254.1 - 3.2e-11 43.8 4.8 2.2e-07 31.5 0.1 3.4 3 0 0 3 3 3 2 HlyD family secretion protein ACR_tran PF00873.19 CTQ30255.1 - 0 1431.4 21.1 0 1431.2 21.1 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 CTQ30255.1 - 2.3e-08 33.4 29.2 5.5e-07 28.8 10.0 2.5 2 0 0 2 2 2 2 MMPL family SecD_SecF PF02355.16 CTQ30255.1 - 3.3e-07 29.9 27.2 0.00061 19.2 3.1 2.5 2 0 0 2 2 2 2 Protein export membrane protein DUF3561 PF12084.8 CTQ30255.1 - 0.048 13.7 0.2 0.048 13.7 0.2 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3561) LPAM_1 PF08139.12 CTQ30256.1 - 0.0054 17.1 3.1 0.0054 17.1 3.1 2.8 3 0 0 3 3 3 1 Prokaryotic membrane lipoprotein lipid attachment site FlaE PF07559.14 CTQ30256.1 - 0.017 15.7 0.0 0.017 15.7 0.0 1.0 1 0 0 1 1 1 0 Flagellar basal body protein FlaE Gram_pos_anchor PF00746.21 CTQ30256.1 - 2.5 8.1 5.3 9.5 6.3 0.9 2.2 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Hexapep PF00132.24 CTQ30257.1 - 9.4e-18 63.2 10.8 3.7e-09 35.9 1.7 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 CTQ30257.1 - 5.3e-07 29.3 12.3 0.0013 18.4 6.6 4.1 3 1 1 4 4 4 3 Hexapeptide repeat of succinyl-transferase DUF1488 PF07369.11 CTQ30258.1 - 1.1e-31 108.7 0.1 1.2e-31 108.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1488) Shikimate_dh_N PF08501.11 CTQ30259.1 - 1.2e-24 86.4 0.0 1.9e-24 85.7 0.0 1.4 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 CTQ30259.1 - 4.5e-09 36.5 0.0 7.6e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase SDH_C PF18317.1 CTQ30259.1 - 6e-07 29.1 0.8 1e-06 28.4 0.8 1.4 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Sua5_yciO_yrdC PF01300.18 CTQ30260.1 - 1.2e-43 148.7 0.0 1.3e-43 148.5 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination zf-C4_Topoisom PF01396.19 CTQ30261.1 - 3.8e-54 180.2 21.8 1.7e-17 62.9 0.6 4.2 4 0 0 4 4 4 4 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.6 CTQ30261.1 - 4.9e-06 25.7 14.9 0.21 11.0 0.1 5.4 5 0 0 5 5 5 3 zinc-ribbon domain Zn-ribbon_8 PF09723.10 CTQ30261.1 - 0.00015 21.8 17.2 0.19 11.9 0.5 4.6 5 0 0 5 5 4 2 Zinc ribbon domain zinc_ribbon_2 PF13240.6 CTQ30261.1 - 0.00022 20.8 17.3 0.56 10.0 0.3 5.6 5 0 0 5 5 5 2 zinc-ribbon domain Auto_anti-p27 PF06677.12 CTQ30261.1 - 0.00058 20.0 12.2 1.2 9.3 0.6 4.5 4 0 0 4 4 4 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.7 CTQ30261.1 - 0.003 17.5 18.2 2.5e+03 -1.4 18.6 4.2 1 1 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.12 CTQ30261.1 - 0.0094 15.4 11.9 0.55 9.8 0.1 4.3 4 0 0 4 4 4 1 TFIIB zinc-binding Ogr_Delta PF04606.12 CTQ30261.1 - 0.0098 15.9 22.4 0.51 10.4 0.1 5.7 4 2 0 4 4 4 2 Ogr/Delta-like zinc finger zf-ISL3 PF14690.6 CTQ30261.1 - 0.029 15.0 10.4 5.4 7.8 0.2 4.4 4 0 0 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Toprim_C_rpt PF13368.6 CTQ30261.1 - 0.039 14.0 0.0 4.7 7.3 0.0 2.6 2 1 0 2 2 2 0 Topoisomerase C-terminal repeat zf-Mss51 PF13824.6 CTQ30261.1 - 0.055 13.6 10.7 5.9 7.1 0.4 4.3 4 0 0 4 4 4 0 Zinc-finger of mitochondrial splicing suppressor 51 YacG PF03884.14 CTQ30261.1 - 0.058 13.1 14.9 3.4 7.5 0.8 4.3 4 0 0 4 4 4 0 DNA gyrase inhibitor YacG zf-RRN7 PF11781.8 CTQ30261.1 - 0.12 12.1 0.3 0.12 12.1 0.3 4.1 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Zn_Tnp_IS1 PF03811.13 CTQ30261.1 - 0.15 11.9 23.1 0.48 10.2 0.7 4.7 4 1 0 4 4 4 0 InsA N-terminal domain zinc_ribbon_4 PF13717.6 CTQ30261.1 - 0.18 11.8 11.7 20 5.2 0.1 5.0 6 0 0 6 6 4 0 zinc-ribbon domain zf_UBZ PF18439.1 CTQ30261.1 - 0.19 11.3 13.0 17 5.1 0.1 5.4 5 0 0 5 5 5 0 Ubiquitin-Binding Zinc Finger DUF35_N PF12172.8 CTQ30261.1 - 0.31 11.0 0.1 0.31 11.0 0.1 4.8 5 0 0 5 5 5 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Ribosomal_S27e PF01667.17 CTQ30261.1 - 0.36 10.6 8.2 0.72 9.6 0.3 3.9 3 1 0 4 4 4 0 Ribosomal protein S27 DUF2752 PF10825.8 CTQ30261.1 - 0.36 10.9 4.9 24 5.1 0.0 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2752) ADK_lid PF05191.14 CTQ30261.1 - 0.39 10.8 14.3 3.5 7.7 0.0 4.6 4 1 0 4 4 4 0 Adenylate kinase, active site lid RNA_POL_M_15KD PF02150.16 CTQ30261.1 - 0.44 10.4 14.6 0.58 10.1 0.2 4.5 4 1 0 4 4 4 0 RNA polymerases M/15 Kd subunit DUF983 PF06170.12 CTQ30261.1 - 0.45 11.0 3.0 36 4.8 0.0 3.8 4 0 0 4 4 4 0 Protein of unknown function (DUF983) zf-CGNR PF11706.8 CTQ30261.1 - 0.49 10.3 0.1 0.49 10.3 0.1 3.0 4 0 0 4 4 3 0 CGNR zinc finger VP_N-CPKC PF11475.8 CTQ30261.1 - 1 9.4 6.9 21 5.2 0.0 4.2 4 0 0 4 4 4 0 Virion protein N terminal domain HypA PF01155.19 CTQ30261.1 - 1 9.4 15.6 57 3.8 0.1 3.8 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Mu-like_Com PF10122.9 CTQ30261.1 - 1.3 8.6 7.1 3.1 7.3 0.1 3.7 4 0 0 4 4 4 0 Mu-like prophage protein Com Zn_ribbon_SprT PF17283.2 CTQ30261.1 - 1.3 9.0 13.1 6.2 6.8 1.7 4.8 5 0 0 5 5 5 0 SprT-like zinc ribbon domain DUF1272 PF06906.11 CTQ30261.1 - 1.5 9.0 15.6 4.1 7.6 0.1 4.6 4 2 0 4 4 4 0 Protein of unknown function (DUF1272) PhnA_Zn_Ribbon PF08274.12 CTQ30261.1 - 1.8 8.6 13.5 9.4 6.3 0.2 4.3 3 1 0 3 3 3 0 PhnA Zinc-Ribbon Terminase_GpA PF05876.12 CTQ30261.1 - 2.5 6.6 7.6 0.11 11.0 1.0 1.8 2 0 0 2 2 2 0 Phage terminase large subunit (GpA) zf-TFIIB PF13453.6 CTQ30261.1 - 2.5 7.5 15.7 7 6.1 0.3 4.4 4 0 0 4 4 4 0 Transcription factor zinc-finger PADR1 PF08063.12 CTQ30261.1 - 3.7 7.4 20.1 2.7 7.8 0.8 4.8 4 2 0 4 4 4 0 PADR1 (NUC008) domain Nudix_N_2 PF14803.6 CTQ30261.1 - 5.3 7.1 21.4 3.7 7.6 0.4 5.5 5 2 0 5 5 5 0 Nudix N-terminal DUF494 PF04361.13 CTQ30262.1 - 7.3e-58 194.8 5.5 8.1e-58 194.6 5.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF494) DNA_processg_A PF02481.15 CTQ30263.1 - 2.2e-71 239.5 0.0 2.8e-71 239.1 0.0 1.1 1 0 0 1 1 1 1 DNA recombination-mediator protein A DprA_WH PF17782.1 CTQ30263.1 - 2.5e-10 40.3 0.5 5.6e-10 39.2 0.5 1.6 1 0 0 1 1 1 1 DprA winged helix domain LDcluster4 PF18306.1 CTQ30263.1 - 0.1 12.2 0.1 0.19 11.3 0.1 1.4 1 1 0 1 1 1 0 SLOG cluster4 family Pep_deformylase PF01327.21 CTQ30264.1 - 1.1e-50 171.3 0.3 1.3e-50 171.1 0.3 1.0 1 0 0 1 1 1 1 Polypeptide deformylase Formyl_trans_N PF00551.19 CTQ30265.1 - 5.8e-54 182.6 0.0 8.6e-54 182.0 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase Formyl_trans_C PF02911.18 CTQ30265.1 - 2.7e-32 111.0 0.1 4e-32 110.4 0.1 1.3 1 0 0 1 1 1 1 Formyl transferase, C-terminal domain Methyltr_RsmB-F PF01189.17 CTQ30266.1 - 1.4e-76 256.6 0.0 2.1e-76 256.1 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F NusB PF01029.18 CTQ30266.1 - 1.5e-25 90.0 0.0 2.7e-25 89.1 0.0 1.4 1 0 0 1 1 1 1 NusB family Methyltransf_31 PF13847.6 CTQ30266.1 - 1.9e-09 37.5 0.0 8.3e-09 35.4 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain FtsJ PF01728.19 CTQ30266.1 - 9.4e-07 29.1 0.0 1.7e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_25 PF13649.6 CTQ30266.1 - 8.3e-06 26.4 0.0 4e-05 24.2 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 CTQ30266.1 - 1.2e-05 25.0 0.0 0.00015 21.3 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_5 PF01795.19 CTQ30266.1 - 0.00045 19.8 0.0 0.0012 18.4 0.0 1.6 2 0 0 2 2 2 1 MraW methylase family Methyltr_RsmF_N PF17125.5 CTQ30266.1 - 0.001 19.5 0.0 0.0023 18.4 0.0 1.6 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltransf_15 PF09445.10 CTQ30266.1 - 0.0053 16.4 0.0 0.0097 15.5 0.0 1.5 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 CTQ30266.1 - 0.013 15.2 0.0 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Ubie_methyltran PF01209.18 CTQ30266.1 - 0.058 12.7 0.0 0.18 11.1 0.0 1.7 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family TAF6_C PF07571.13 CTQ30266.1 - 0.17 12.2 0.1 0.45 10.9 0.0 1.7 2 0 0 2 2 1 0 TAF6 C-terminal HEAT repeat domain TrkA_N PF02254.18 CTQ30267.1 - 1.9e-57 192.5 3.4 7e-29 100.4 0.0 2.5 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 CTQ30267.1 - 8.3e-25 86.4 0.4 4.3e-11 42.5 0.2 3.0 2 0 0 2 2 2 2 TrkA-C domain F420_oxidored PF03807.17 CTQ30267.1 - 4.8e-11 43.1 3.4 0.00035 21.1 0.2 3.8 3 2 0 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 CTQ30267.1 - 7.1e-11 42.5 2.7 0.00023 21.6 0.1 3.3 2 1 1 3 3 3 2 Putative NAD(P)-binding Shikimate_DH PF01488.20 CTQ30267.1 - 5.4e-10 39.5 1.6 1.7e-05 24.9 0.5 2.8 2 1 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 CTQ30267.1 - 2.2e-09 37.7 1.2 0.00044 20.5 0.2 2.6 2 0 0 2 2 2 2 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 CTQ30267.1 - 3.6e-09 36.5 0.2 0.0022 17.7 0.0 3.1 3 0 0 3 3 3 2 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 CTQ30267.1 - 1.3e-06 28.4 1.9 0.033 14.1 0.3 2.4 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_10 PF13460.6 CTQ30267.1 - 1.7e-06 28.0 4.1 0.0044 16.9 0.5 2.5 2 1 0 2 2 2 2 NAD(P)H-binding NAD_binding_2 PF03446.15 CTQ30267.1 - 4.9e-06 26.8 1.1 0.044 14.0 0.3 2.7 2 0 0 2 2 2 2 NAD binding domain of 6-phosphogluconate dehydrogenase GFO_IDH_MocA PF01408.22 CTQ30267.1 - 0.00014 22.6 0.7 0.0091 16.8 0.1 2.8 3 0 0 3 3 2 1 Oxidoreductase family, NAD-binding Rossmann fold Pyr_redox PF00070.27 CTQ30267.1 - 0.00015 22.2 2.0 0.45 11.1 0.0 3.1 4 0 0 4 4 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 CTQ30267.1 - 0.00017 21.0 0.2 0.066 12.4 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.23 CTQ30267.1 - 0.0002 21.4 0.5 0.37 10.8 0.0 3.1 2 2 1 3 3 3 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AlaDh_PNT_C PF01262.21 CTQ30267.1 - 0.0002 20.7 6.3 0.03 13.6 0.2 3.1 2 1 1 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain Epimerase PF01370.21 CTQ30267.1 - 0.0019 17.7 1.3 0.8 9.1 0.1 2.5 2 0 0 2 2 2 2 NAD dependent epimerase/dehydratase family UDPG_MGDP_dh_N PF03721.14 CTQ30267.1 - 0.0024 17.5 0.0 0.02 14.5 0.0 2.3 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF1188 PF06690.11 CTQ30267.1 - 0.0033 17.0 0.1 2.9 7.4 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF1188) NAD_binding_8 PF13450.6 CTQ30267.1 - 0.011 15.9 0.1 5.9 7.2 0.0 2.9 3 0 0 3 3 2 0 NAD(P)-binding Rossmann-like domain XdhC_C PF13478.6 CTQ30267.1 - 0.014 15.9 0.6 1.2 9.6 0.0 2.7 2 1 0 2 2 2 0 XdhC Rossmann domain adh_short PF00106.25 CTQ30267.1 - 0.019 14.4 1.0 0.56 9.6 0.1 2.9 3 0 0 3 3 3 0 short chain dehydrogenase DAO PF01266.24 CTQ30267.1 - 0.03 13.9 0.2 1.4 8.5 0.0 2.3 2 0 0 2 2 2 0 FAD dependent oxidoreductase ThiF PF00899.21 CTQ30267.1 - 0.11 11.8 1.4 6.4 6.0 0.3 2.4 2 0 0 2 2 2 0 ThiF family eIF-1a PF01176.19 CTQ30267.1 - 0.19 11.6 0.5 30 4.5 0.0 3.5 3 0 0 3 3 3 0 Translation initiation factor 1A / IF-1 MscL PF01741.18 CTQ30268.1 - 1.3e-46 157.8 1.2 1.5e-46 157.7 1.2 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL UPF0239 PF06783.11 CTQ30268.1 - 0.0059 16.8 0.3 0.0096 16.1 0.0 1.5 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0239) DUF3487 PF11990.8 CTQ30268.1 - 0.093 12.6 1.2 2.5 8.0 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) ArfA PF03889.13 CTQ30269.1 - 9.2e-27 92.3 2.3 1.2e-26 91.9 2.3 1.2 1 0 0 1 1 1 1 Alternative ribosome-rescue factor A MerR_1 PF13411.6 CTQ30270.1 - 4.3e-21 74.8 0.3 4.3e-21 74.8 0.3 1.5 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR-DNA-bind PF09278.11 CTQ30270.1 - 2.3e-19 69.7 5.9 3.6e-19 69.0 5.9 1.3 1 0 0 1 1 1 1 MerR, DNA binding MerR PF00376.23 CTQ30270.1 - 9.7e-13 47.7 0.0 1.9e-12 46.7 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein DUF1992 PF09350.10 CTQ30271.1 - 2.8e-24 85.1 0.0 4.1e-24 84.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1992) Ribosomal_L17 PF01196.19 CTQ30272.1 - 1.2e-34 119.1 0.0 1.4e-34 118.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L17 RNA_pol_L PF01193.24 CTQ30273.1 - 2.5e-24 84.5 0.0 4.1e-24 83.8 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_A_CTD PF03118.15 CTQ30273.1 - 4.5e-24 84.0 0.1 8e-24 83.2 0.1 1.4 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain RNA_pol_A_bac PF01000.26 CTQ30273.1 - 8.2e-24 84.1 0.2 1.9e-23 83.0 0.1 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L_2 PF13656.6 CTQ30273.1 - 0.00012 21.8 0.0 0.61 9.9 0.0 2.6 2 0 0 2 2 2 2 RNA polymerase Rpb3/Rpb11 dimerisation domain YjbH PF06082.11 CTQ30273.1 - 0.27 10.0 0.1 0.41 9.4 0.1 1.2 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH Ribosomal_S4 PF00163.19 CTQ30274.1 - 1.9e-32 112.0 2.3 1.9e-32 112.0 2.3 1.6 2 0 0 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain S4 PF01479.25 CTQ30274.1 - 5.9e-19 67.5 0.5 1.2e-18 66.5 0.5 1.6 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 CTQ30274.1 - 0.011 15.5 0.4 0.023 14.5 0.4 1.5 1 0 0 1 1 1 0 S4 domain E1_dh PF00676.20 CTQ30274.1 - 0.042 12.8 0.1 0.059 12.3 0.1 1.2 1 0 0 1 1 1 0 Dehydrogenase E1 component SAM_DrpA PF18255.1 CTQ30274.1 - 0.095 13.0 0.1 0.18 12.0 0.1 1.4 1 0 0 1 1 1 0 DNA processing protein A sterile alpha motif domain TyrRSs_C PF16714.5 CTQ30274.1 - 0.096 12.5 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain Ribosomal_S11 PF00411.19 CTQ30275.1 - 1.4e-54 183.2 0.8 1.7e-54 182.9 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 Ribosomal_S13 PF00416.22 CTQ30276.1 - 1.5e-34 119.2 6.8 9.4e-33 113.3 6.8 2.0 1 1 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 CTQ30276.1 - 0.0049 15.7 0.0 0.0051 15.6 0.0 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) SecY PF00344.20 CTQ30277.1 - 4.4e-118 394.0 18.6 5.5e-118 393.7 18.6 1.1 1 0 0 1 1 1 1 SecY translocase Orf78 PF06024.12 CTQ30277.1 - 0.23 11.8 0.4 0.9 9.9 0.4 2.0 1 0 0 1 1 1 0 Orf78 (ac78) Ribosomal_L27A PF00828.19 CTQ30278.1 - 5.1e-33 114.5 2.0 6.6e-33 114.1 2.0 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 CTQ30278.1 - 0.025 14.0 0.2 0.041 13.3 0.2 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L30 PF00327.20 CTQ30279.1 - 9.2e-19 67.1 0.1 1e-18 66.9 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_S5_C PF03719.15 CTQ30281.1 - 1.2e-30 104.8 0.5 2.2e-30 103.9 0.5 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_S5 PF00333.20 CTQ30281.1 - 4.4e-30 103.4 2.6 7.9e-30 102.6 2.6 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_L18p PF00861.22 CTQ30282.1 - 7.5e-44 148.8 4.5 8.2e-44 148.7 4.5 1.0 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L5e PF17144.4 CTQ30282.1 - 0.0032 17.5 0.1 0.0036 17.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 TM1506 PF08973.10 CTQ30282.1 - 0.087 12.5 0.2 0.17 11.5 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1893) Ribosomal_L6 PF00347.23 CTQ30283.1 - 5.8e-40 135.8 0.2 1.1e-18 67.6 0.0 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Ribosomal_S8 PF00410.19 CTQ30284.1 - 2.3e-49 166.6 0.1 2.5e-49 166.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 CTQ30285.1 - 7.5e-27 92.9 1.6 1e-26 92.4 1.6 1.2 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e Ribosomal_L5_C PF00673.21 CTQ30286.1 - 3.8e-41 139.2 0.0 6e-41 138.5 0.0 1.3 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 CTQ30286.1 - 6e-29 100.2 0.3 1.1e-28 99.3 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 DUF2862 PF11061.8 CTQ30286.1 - 0.05 13.4 0.1 0.24 11.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2862) ribosomal_L24 PF17136.4 CTQ30287.1 - 1.3e-23 83.2 0.1 1.3e-23 83.2 0.1 1.6 2 0 0 2 2 2 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 CTQ30287.1 - 3.5e-05 23.6 3.2 8.2e-05 22.4 3.2 1.7 1 0 0 1 1 1 1 KOW motif Ribosomal_L14 PF00238.19 CTQ30288.1 - 7.9e-55 184.2 1.0 8.7e-55 184.0 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Gp58 PF07902.11 CTQ30288.1 - 0.064 11.5 0.1 0.073 11.3 0.1 1.0 1 0 0 1 1 1 0 gp58-like protein Ribosomal_S17 PF00366.20 CTQ30289.1 - 4.6e-34 116.3 2.2 5.4e-34 116.1 2.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_L29 PF00831.23 CTQ30290.1 - 3.6e-23 81.3 7.7 4e-23 81.1 7.7 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein MRP-L47 PF06984.13 CTQ30290.1 - 0.0011 19.1 2.7 0.0013 18.8 2.7 1.1 1 0 0 1 1 1 1 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) Ribosomal_L16 PF00252.18 CTQ30291.1 - 2.1e-46 157.2 0.4 2.3e-46 157.0 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Ribosomal_S3_C PF00189.20 CTQ30292.1 - 1.1e-41 141.2 0.9 2.1e-41 140.3 0.9 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 CTQ30292.1 - 4.2e-19 68.2 3.4 9.5e-19 67.0 3.4 1.6 1 0 0 1 1 1 1 KH domain KH_4 PF13083.6 CTQ30292.1 - 0.00032 20.5 0.2 0.00074 19.3 0.2 1.7 1 1 0 1 1 1 1 KH domain MRP-S24 PF14955.6 CTQ30292.1 - 0.026 14.5 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S24 Ribosomal_L22 PF00237.19 CTQ30293.1 - 2.7e-34 117.5 2.0 3e-34 117.4 2.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S19 PF00203.21 CTQ30294.1 - 1.3e-35 121.1 0.0 1.5e-35 120.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19 Ribosomal_L2_C PF03947.18 CTQ30295.1 - 1.3e-55 187.0 3.1 2e-55 186.3 3.1 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 CTQ30295.1 - 2.9e-34 116.8 0.9 8.5e-34 115.4 0.9 1.7 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L23 PF00276.20 CTQ30296.1 - 6.1e-31 106.6 4.7 7e-31 106.5 4.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L23 ubiquitin PF00240.23 CTQ30296.1 - 0.0031 17.2 0.3 0.0046 16.7 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin family P16-Arc PF04699.14 CTQ30296.1 - 0.049 14.1 0.5 0.061 13.8 0.5 1.1 1 0 0 1 1 1 0 ARP2/3 complex 16 kDa subunit (p16-Arc) WHEP-TRS PF00458.20 CTQ30296.1 - 0.051 13.7 1.9 0.13 12.5 1.9 1.7 1 0 0 1 1 1 0 WHEP-TRS domain Cadherin-like PF12733.7 CTQ30296.1 - 0.071 13.6 0.2 0.086 13.4 0.2 1.1 1 0 0 1 1 1 0 Cadherin-like beta sandwich domain DnaJ PF00226.31 CTQ30296.1 - 0.15 12.2 0.3 0.34 11.1 0.1 1.7 2 0 0 2 2 2 0 DnaJ domain Ribosomal_L4 PF00573.22 CTQ30297.1 - 7e-64 215.1 1.0 7.8e-64 214.9 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.22 CTQ30299.1 - 9.7e-15 54.4 7.5 1.9e-14 53.4 5.7 2.1 1 1 1 2 2 2 2 Ribosomal protein L3 Ribosomal_S10 PF00338.22 CTQ30300.1 - 2.1e-35 120.9 0.1 2.3e-35 120.7 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e Peptidase_A24 PF01478.18 CTQ30302.1 - 4.3e-21 75.3 10.8 6.7e-21 74.7 4.9 2.2 2 0 0 2 2 2 2 Type IV leader peptidase family YesK PF14150.6 CTQ30302.1 - 0.22 11.8 3.0 0.17 12.1 0.7 1.9 1 1 0 1 1 1 0 YesK-like protein Ferritin PF00210.24 CTQ30303.1 - 6.1e-38 130.0 2.5 7.3e-38 129.7 2.5 1.1 1 0 0 1 1 1 1 Ferritin-like domain DUF1241 PF06840.11 CTQ30303.1 - 0.01 15.5 0.0 0.019 14.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) Fer2_BFD PF04324.15 CTQ30304.1 - 3e-14 53.1 0.2 3.9e-14 52.7 0.2 1.2 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain GTP_EFTU PF00009.27 CTQ30306.1 - 2.5e-67 226.2 0.1 3.9e-67 225.6 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 CTQ30306.1 - 1.2e-44 151.0 0.0 2.6e-44 149.9 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 CTQ30306.1 - 4.3e-34 116.4 0.0 9.6e-34 115.3 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 CTQ30306.1 - 1.2e-28 99.0 0.0 3e-28 97.7 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 CTQ30306.1 - 2.4e-16 59.9 0.2 6.5e-16 58.5 0.2 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 CTQ30306.1 - 8.3e-07 28.9 0.2 3.1e-06 27.0 0.0 1.9 2 0 0 2 2 2 1 Class II release factor RF3, C-terminal domain Slu7 PF11708.8 CTQ30306.1 - 0.13 12.0 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Pre-mRNA splicing Prp18-interacting factor Ribosomal_S7 PF00177.21 CTQ30307.1 - 1.5e-64 216.1 2.6 1.7e-64 216.0 2.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e ArgJ PF01960.18 CTQ30307.1 - 0.023 13.4 0.0 0.029 13.1 0.0 1.2 1 0 0 1 1 1 0 ArgJ family Ribosom_S12_S23 PF00164.25 CTQ30308.1 - 4.7e-43 145.4 1.0 5.4e-43 145.2 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S12 PF17487.2 CTQ30308.1 - 0.1 13.3 0.0 0.19 12.5 0.0 1.4 1 1 0 1 1 1 0 Ribosomal protein S12 DsrH PF04077.12 CTQ30309.1 - 6.7e-26 90.2 0.1 7.4e-26 90.1 0.1 1.0 1 0 0 1 1 1 1 DsrH like protein DUF4350 PF14258.6 CTQ30309.1 - 0.034 14.6 0.1 0.11 12.9 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4350) DrsE PF02635.15 CTQ30310.1 - 5.5e-23 81.5 0.0 6.1e-23 81.4 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE PF02635.15 CTQ30311.1 - 1.5e-27 96.3 0.0 1.7e-27 96.1 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family PAS_6 PF08348.11 CTQ30312.1 - 2.3e-36 124.2 0.1 4e-36 123.4 0.1 1.4 1 0 0 1 1 1 1 YheO-like PAS domain HTH_22 PF13309.6 CTQ30312.1 - 6.6e-19 67.8 0.3 1.1e-18 67.1 0.3 1.3 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.6 CTQ30312.1 - 8.4e-06 25.4 0.0 1.8e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_7 PF02796.15 CTQ30312.1 - 0.00029 20.8 0.1 0.001 19.1 0.1 1.9 2 1 0 2 2 2 1 Helix-turn-helix domain of resolvase DUF658 PF04936.12 CTQ30312.1 - 0.0041 16.9 0.1 0.0065 16.2 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF658) HTH_17 PF12728.7 CTQ30312.1 - 0.0045 17.1 0.0 0.008 16.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_10 PF04967.12 CTQ30312.1 - 0.026 14.3 0.1 0.055 13.3 0.1 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_29 PF13551.6 CTQ30312.1 - 0.031 14.3 0.0 0.063 13.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix dCache_1 PF02743.18 CTQ30312.1 - 0.056 13.2 0.0 0.13 12.0 0.0 1.6 1 1 0 1 1 1 0 Cache domain GerE PF00196.19 CTQ30312.1 - 0.086 12.4 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Phage_CI_repr PF07022.13 CTQ30312.1 - 0.1 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain DUF3791 PF12668.7 CTQ30312.1 - 0.12 12.4 0.1 0.37 10.9 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3791) HTH_28 PF13518.6 CTQ30312.1 - 0.14 12.3 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MerR PF00376.23 CTQ30312.1 - 0.14 11.9 0.0 0.28 11.0 0.0 1.5 1 0 0 1 1 1 0 MerR family regulatory protein FKBP_C PF00254.28 CTQ30313.1 - 1.1e-29 102.6 0.0 9.8e-28 96.3 0.0 2.5 2 1 0 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_N PF01346.18 CTQ30313.1 - 2.8e-22 79.5 8.5 5.4e-22 78.6 8.5 1.5 1 0 0 1 1 1 1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XhlA PF10779.9 CTQ30313.1 - 0.11 12.7 0.6 0.26 11.5 0.6 1.6 1 0 0 1 1 1 0 Haemolysin XhlA DUF4827 PF16109.5 CTQ30313.1 - 0.14 12.1 2.2 9 6.2 0.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4827) DUF3811 PF11656.8 CTQ30313.1 - 0.92 9.9 7.2 0.23 11.9 3.2 2.0 2 0 0 2 2 2 0 YjbD family (DUF3811) SlyX PF04102.12 CTQ30314.1 - 4.2e-23 81.7 3.7 4.6e-23 81.6 3.7 1.0 1 0 0 1 1 1 1 SlyX Sugarporin_N PF11471.8 CTQ30314.1 - 0.0065 16.4 0.3 0.0065 16.4 0.3 1.6 2 0 0 2 2 2 1 Maltoporin periplasmic N-terminal extension DUF641 PF04859.12 CTQ30314.1 - 0.012 16.0 1.2 0.014 15.8 1.2 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Tropomyosin PF00261.20 CTQ30314.1 - 0.014 14.8 2.0 0.018 14.4 2.0 1.1 1 0 0 1 1 1 0 Tropomyosin DUF16 PF01519.16 CTQ30314.1 - 0.026 15.0 0.4 0.03 14.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 Cep57_CLD_2 PF14197.6 CTQ30314.1 - 0.034 14.2 1.3 0.067 13.3 1.3 1.5 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 Prefoldin_2 PF01920.20 CTQ30314.1 - 0.056 13.4 1.1 0.077 13.0 1.1 1.2 1 0 0 1 1 1 0 Prefoldin subunit QWRF PF04484.12 CTQ30314.1 - 0.063 13.0 0.4 0.075 12.8 0.4 1.1 1 0 0 1 1 1 0 QWRF family Atg14 PF10186.9 CTQ30314.1 - 0.086 11.9 0.3 0.098 11.7 0.3 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YgbB PF02542.16 CTQ30314.1 - 0.089 13.1 0.2 0.098 12.9 0.2 1.0 1 0 0 1 1 1 0 YgbB family MPS2 PF17060.5 CTQ30314.1 - 0.15 11.3 0.4 0.16 11.2 0.4 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 FKBP_C PF00254.28 CTQ30315.1 - 1.4e-09 38.1 0.0 2e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF2387 PF09526.10 CTQ30317.1 - 5.5e-19 68.1 2.5 6.3e-19 67.9 2.5 1.1 1 0 0 1 1 1 1 Probable metal-binding protein (DUF2387) Zn_Tnp_IS1595 PF12760.7 CTQ30317.1 - 0.00079 19.4 0.5 0.00079 19.4 0.5 1.5 2 0 0 2 2 2 1 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 CTQ30317.1 - 0.005 17.2 1.4 0.0063 16.9 1.4 1.1 1 0 0 1 1 1 1 Restriction alleviation protein Lar zf-ribbon_3 PF13248.6 CTQ30317.1 - 0.0074 15.7 0.7 1.3 8.5 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zf-TFIIB PF13453.6 CTQ30317.1 - 0.0081 15.5 1.0 0.014 14.7 0.9 1.4 1 1 0 1 1 1 1 Transcription factor zinc-finger Elf1 PF05129.13 CTQ30317.1 - 0.028 14.4 1.8 0.035 14.2 1.8 1.3 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like GATA PF00320.27 CTQ30317.1 - 0.029 14.0 0.3 0.044 13.4 0.3 1.3 1 0 0 1 1 1 0 GATA zinc finger OrfB_Zn_ribbon PF07282.11 CTQ30317.1 - 0.033 14.1 1.4 0.041 13.8 1.4 1.3 1 1 0 1 1 1 0 Putative transposase DNA-binding domain PhnA_Zn_Ribbon PF08274.12 CTQ30317.1 - 0.043 13.8 0.3 0.076 13.0 0.3 1.4 1 1 0 1 1 1 0 PhnA Zinc-Ribbon eIF-5_eIF-2B PF01873.17 CTQ30317.1 - 0.043 13.7 0.5 0.059 13.3 0.5 1.2 1 0 0 1 1 1 0 Domain found in IF2B/IF5 Rubredoxin_2 PF18073.1 CTQ30317.1 - 0.047 13.4 2.7 1.7 8.4 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zinc_ribbon_4 PF13717.6 CTQ30317.1 - 0.063 13.2 4.3 0.31 11.0 4.3 2.0 1 1 0 1 1 1 0 zinc-ribbon domain TFIIS_C PF01096.18 CTQ30317.1 - 0.086 12.7 4.4 1.7 8.6 0.6 2.6 2 1 1 3 3 3 0 Transcription factor S-II (TFIIS) DZR PF12773.7 CTQ30317.1 - 0.096 12.7 2.7 0.31 11.1 2.7 1.8 1 1 0 1 1 1 0 Double zinc ribbon BIR PF00653.21 CTQ30317.1 - 0.1 13.3 0.7 0.1 13.3 0.7 1.8 1 1 1 2 2 2 0 Inhibitor of Apoptosis domain zf-IS66 PF13005.7 CTQ30317.1 - 0.12 12.8 3.2 1.5 9.3 0.7 2.2 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 CpXC PF14353.6 CTQ30317.1 - 0.13 12.3 2.1 4.7 7.3 2.1 2.1 1 1 0 1 1 1 0 CpXC protein Ribosomal_S27e PF01667.17 CTQ30317.1 - 0.13 11.9 2.0 0.3 10.8 2.0 1.6 1 1 0 1 1 1 0 Ribosomal protein S27 ADD_ATRX PF17981.1 CTQ30317.1 - 0.93 9.4 4.4 0.5 10.3 0.3 2.1 1 1 1 2 2 2 0 Cysteine Rich ADD domain Zn-ribbon_8 PF09723.10 CTQ30317.1 - 1.9 8.7 5.8 13 6.0 0.5 2.2 1 1 2 3 3 3 0 Zinc ribbon domain Na_H_Exchanger PF00999.21 CTQ30318.1 - 8.7e-66 222.3 49.0 1.2e-65 221.8 49.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 CTQ30318.1 - 6.6e-25 87.6 0.0 1.2e-24 86.8 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain 2-Hacid_dh_C PF02826.19 CTQ30318.1 - 0.032 13.6 0.1 0.085 12.2 0.1 1.7 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 CTQ30318.1 - 0.034 14.4 0.0 0.064 13.5 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 CTQ30318.1 - 0.078 13.0 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase FAD_binding_3 PF01494.19 CTQ30318.1 - 0.1 11.8 0.1 0.14 11.4 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain DUF4781 PF16013.5 CTQ30318.1 - 3.1 6.5 6.0 0.37 9.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4781) Flavodoxin_2 PF02525.17 CTQ30319.1 - 2e-37 128.9 0.0 2.3e-37 128.7 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 CTQ30319.1 - 0.0014 18.4 0.0 0.0024 17.6 0.0 1.6 1 0 0 1 1 1 1 NADPH-dependent FMN reductase ABC_tran PF00005.27 CTQ30320.1 - 2.8e-51 173.6 3.7 1.8e-25 90.0 0.0 3.7 4 0 0 4 4 3 2 ABC transporter ABC_tran_Xtn PF12848.7 CTQ30320.1 - 4.9e-29 100.2 4.1 4.9e-29 100.2 4.1 3.2 2 1 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 CTQ30320.1 - 4.8e-15 56.2 12.5 0.0027 17.6 0.4 4.3 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30320.1 - 4.5e-08 32.8 0.8 0.091 12.2 0.0 4.2 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 CTQ30320.1 - 1e-07 32.0 0.2 0.0024 18.0 0.0 2.9 2 1 0 2 2 2 2 50S ribosome-binding GTPase ABC_tran_CTD PF16326.5 CTQ30320.1 - 7.1e-07 29.4 10.1 7.1e-07 29.4 10.1 2.6 3 0 0 3 3 1 1 ABC transporter C-terminal domain AAA_29 PF13555.6 CTQ30320.1 - 5.2e-06 26.1 1.7 0.054 13.3 0.1 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ30320.1 - 7.6e-06 25.9 1.7 0.037 13.9 0.1 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_18 PF13238.6 CTQ30320.1 - 8.7e-06 26.3 0.1 0.18 12.4 0.0 3.4 3 0 0 3 3 2 2 AAA domain AAA_16 PF13191.6 CTQ30320.1 - 1.9e-05 25.1 6.1 0.0024 18.2 0.0 3.2 4 0 0 4 4 2 2 AAA ATPase domain KAP_NTPase PF07693.14 CTQ30320.1 - 0.00018 20.8 1.9 0.07 12.4 0.1 2.8 2 2 0 2 2 2 2 KAP family P-loop domain RNA_helicase PF00910.22 CTQ30320.1 - 0.00046 20.5 0.4 0.93 9.9 0.0 2.8 3 0 0 3 3 2 1 RNA helicase DUF815 PF05673.13 CTQ30320.1 - 0.00055 19.2 0.9 1.3 8.1 0.1 3.4 2 1 1 3 3 3 1 Protein of unknown function (DUF815) MeaB PF03308.16 CTQ30320.1 - 0.00063 18.8 7.1 0.068 12.1 0.2 2.9 3 0 0 3 3 3 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Val_tRNA-synt_C PF10458.9 CTQ30320.1 - 0.00098 19.4 0.7 0.00098 19.4 0.7 2.7 3 0 0 3 3 1 1 Valyl tRNA synthetase tRNA binding arm Zeta_toxin PF06414.12 CTQ30320.1 - 0.0011 18.2 1.3 0.56 9.5 0.1 2.6 2 0 0 2 2 2 1 Zeta toxin AAA PF00004.29 CTQ30320.1 - 0.0019 18.6 0.1 3.5 8.1 0.0 2.9 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 CTQ30320.1 - 0.0026 17.0 0.0 0.43 9.7 0.0 2.5 2 0 0 2 2 2 1 NB-ARC domain AAA_28 PF13521.6 CTQ30320.1 - 0.0033 17.7 0.0 4.9 7.4 0.0 3.0 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 CTQ30320.1 - 0.0042 17.3 2.3 1.7 8.9 0.0 3.1 3 0 0 3 3 2 1 AAA domain ATP-synt_ab PF00006.25 CTQ30320.1 - 0.0046 16.6 1.0 0.16 11.6 0.0 2.6 3 0 0 3 3 2 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_25 PF13481.6 CTQ30320.1 - 0.0092 15.6 0.1 1.2 8.7 0.0 2.9 2 0 0 2 2 2 1 AAA domain DUF1192 PF06698.11 CTQ30320.1 - 0.0094 16.0 9.6 0.2 11.7 3.8 2.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1192) Dynamin_N PF00350.23 CTQ30320.1 - 0.01 15.9 5.5 0.2 11.7 0.0 3.8 4 0 0 4 4 4 0 Dynamin family AAA_24 PF13479.6 CTQ30320.1 - 0.018 14.8 1.6 2.7 7.7 0.1 2.5 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 CTQ30320.1 - 0.029 14.5 1.5 9.1 6.4 0.0 3.3 3 0 0 3 3 3 0 AAA domain NACHT PF05729.12 CTQ30320.1 - 0.03 14.2 5.6 1 9.2 0.1 3.2 3 0 0 3 3 3 0 NACHT domain NTPase_1 PF03266.15 CTQ30320.1 - 0.031 14.2 1.0 7.1 6.5 0.0 2.6 2 0 0 2 2 2 0 NTPase FeoB_N PF02421.18 CTQ30320.1 - 0.033 13.7 0.1 8.9 5.8 0.0 2.5 2 0 0 2 2 2 0 Ferrous iron transport protein B PduV-EutP PF10662.9 CTQ30320.1 - 0.042 13.6 1.6 4.3 7.1 0.2 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation MobB PF03205.14 CTQ30320.1 - 0.045 13.7 1.0 7.4 6.5 0.1 2.5 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_15 PF13175.6 CTQ30320.1 - 0.06 13.0 0.3 0.06 13.0 0.3 3.9 4 1 1 5 5 4 0 AAA ATPase domain DUF1283 PF06932.11 CTQ30320.1 - 0.061 13.5 3.5 0.12 12.6 3.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) SbcCD_C PF13558.6 CTQ30320.1 - 0.073 13.3 2.9 0.73 10.1 0.1 3.7 3 2 0 3 3 2 0 Putative exonuclease SbcCD, C subunit Roc PF08477.13 CTQ30320.1 - 0.08 13.2 0.9 9.9 6.4 0.1 2.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Lzipper-MIP1 PF14389.6 CTQ30320.1 - 0.1 12.9 0.3 0.1 12.9 0.3 3.7 4 0 0 4 4 2 0 Leucine-zipper of ternary complex factor MIP1 AAA_30 PF13604.6 CTQ30320.1 - 0.11 12.2 4.9 5.6 6.6 0.1 3.3 3 1 0 3 3 2 0 AAA domain AAA_5 PF07728.14 CTQ30320.1 - 0.15 12.0 2.0 6.8 6.7 0.1 2.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) TsaE PF02367.17 CTQ30320.1 - 0.18 11.8 0.4 8.6 6.4 0.0 2.7 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_23 PF13476.6 CTQ30320.1 - 0.24 11.9 0.1 0.24 11.9 0.1 4.1 3 1 0 3 3 3 0 AAA domain SlyX PF04102.12 CTQ30320.1 - 0.28 11.8 11.3 0.98 10.1 0.9 3.4 3 0 0 3 3 2 0 SlyX DUF87 PF01935.17 CTQ30320.1 - 0.37 10.8 10.9 1.2 9.2 0.1 3.4 4 0 0 4 4 4 0 Helicase HerA, central domain DUF4094 PF13334.6 CTQ30320.1 - 0.62 10.5 2.6 1.9 8.9 2.6 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) FliD_N PF02465.18 CTQ30320.1 - 0.9 10.3 7.6 0.077 13.7 0.8 2.4 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus dNK PF01712.19 CTQ30320.1 - 0.95 9.3 5.9 13 5.6 0.0 3.2 3 0 0 3 3 3 0 Deoxynucleoside kinase Trimer_CC PF08954.11 CTQ30320.1 - 1 9.0 6.2 0.37 10.4 1.9 2.6 2 0 0 2 2 2 0 Trimerisation motif DUF3287 PF11690.8 CTQ30320.1 - 1.3 8.8 3.8 0.49 10.1 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) AAA_13 PF13166.6 CTQ30320.1 - 1.5 7.4 13.3 5.3 5.6 0.1 3.7 4 0 0 4 4 4 0 AAA domain Cytochrom_B562 PF07361.11 CTQ30320.1 - 4.6 7.9 9.7 11 6.7 1.9 2.7 2 0 0 2 2 2 0 Cytochrome b562 DivIC PF04977.15 CTQ30320.1 - 4.9 7.0 17.7 1.1 9.1 1.5 2.8 3 0 0 3 3 2 0 Septum formation initiator Snf7 PF03357.21 CTQ30320.1 - 5.5 6.6 16.2 7.4 6.1 4.0 2.3 2 0 0 2 2 2 0 Snf7 DUF4407 PF14362.6 CTQ30320.1 - 6.7 6.0 15.7 4 6.7 8.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) SKA1 PF07160.12 CTQ30320.1 - 9.6 6.0 9.8 1.3 8.8 3.6 2.3 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 Abhydrolase_1 PF00561.20 CTQ30321.1 - 1.7e-20 73.7 0.0 2.2e-20 73.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CTQ30321.1 - 6.5e-08 32.1 0.0 9.5e-08 31.6 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2048 PF09752.9 CTQ30321.1 - 0.00041 19.6 0.0 0.62 9.1 0.0 2.1 2 0 0 2 2 2 2 Abhydrolase domain containing 18 Peptidase_S15 PF02129.18 CTQ30321.1 - 0.0024 17.5 0.0 0.0031 17.1 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Peptidase_S9 PF00326.21 CTQ30321.1 - 0.027 13.9 0.3 7 6.1 0.0 2.7 2 1 1 3 3 3 0 Prolyl oligopeptidase family UPF0270 PF06794.12 CTQ30322.1 - 4e-36 122.9 0.0 4.8e-36 122.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0270) HU-CCDC81_bac_2 PF18175.1 CTQ30322.1 - 0.0031 17.4 0.0 0.0045 16.8 0.0 1.2 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 PRK PF00485.18 CTQ30323.1 - 1.1e-75 253.7 0.0 1.3e-75 253.4 0.0 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.12 CTQ30323.1 - 0.13 11.5 0.0 0.93 8.7 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin OsmC PF02566.19 CTQ30324.1 - 1e-19 70.8 0.1 1.3e-19 70.5 0.1 1.1 1 0 0 1 1 1 1 OsmC-like protein DUF5086 PF16985.5 CTQ30324.1 - 0.026 14.4 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5086) cNMP_binding PF00027.29 CTQ30325.1 - 3.4e-24 84.7 0.0 5.4e-24 84.1 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HTH_Crp_2 PF13545.6 CTQ30325.1 - 4.3e-14 52.2 0.1 2.2e-13 50.0 0.0 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Crp PF00325.20 CTQ30325.1 - 5e-09 35.7 0.1 9.2e-09 34.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family MarR_2 PF12802.7 CTQ30325.1 - 0.00016 21.5 0.0 0.0012 18.7 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_23 PF13384.6 CTQ30325.1 - 0.00053 19.7 0.0 0.0014 18.4 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain RepL PF05732.11 CTQ30325.1 - 0.0011 18.5 0.1 0.16 11.4 0.1 2.3 2 0 0 2 2 2 1 Firmicute plasmid replication protein (RepL) HTH_36 PF13730.6 CTQ30325.1 - 0.0014 18.6 0.0 0.0068 16.3 0.0 2.1 3 0 0 3 3 3 1 Helix-turn-helix domain MarR PF01047.22 CTQ30325.1 - 0.0074 16.2 0.1 0.029 14.3 0.1 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 CTQ30325.1 - 0.0088 15.6 0.2 0.023 14.2 0.2 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 CTQ30325.1 - 0.021 14.4 0.8 0.057 12.9 0.2 2.0 3 0 0 3 3 3 0 Sigma-70, region 4 HTH_7 PF02796.15 CTQ30325.1 - 0.057 13.5 0.1 0.23 11.5 0.1 2.1 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Rrf2 PF02082.20 CTQ30325.1 - 0.091 13.1 0.2 0.85 10.0 0.0 2.3 2 0 0 2 2 2 0 Transcriptional regulator HhH-GPD PF00730.25 CTQ30325.1 - 0.1 13.1 0.0 0.16 12.4 0.0 1.4 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein HTH_11 PF08279.12 CTQ30325.1 - 0.11 12.5 0.4 0.24 11.4 0.1 1.8 2 0 0 2 2 2 0 HTH domain HTH_38 PF13936.6 CTQ30325.1 - 0.12 12.1 0.1 0.47 10.2 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain DUF4868 PF16162.5 CTQ30325.1 - 0.13 12.2 0.0 0.31 10.9 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4868) RPA_C PF08784.11 CTQ30325.1 - 0.14 12.8 0.1 0.29 11.8 0.1 1.5 1 0 0 1 1 1 0 Replication protein A C terminal FUSC-like PF12805.7 CTQ30326.1 - 5.9e-66 222.4 3.2 5.9e-66 222.4 3.2 3.0 3 0 0 3 3 3 2 FUSC-like inner membrane protein yccS FUSC_2 PF13515.6 CTQ30326.1 - 5.4e-21 75.0 11.7 5.4e-21 75.0 11.7 2.5 2 0 0 2 2 2 1 Fusaric acid resistance protein-like FUSC PF04632.12 CTQ30326.1 - 8.2e-10 37.9 8.2 8.2e-10 37.9 8.2 3.1 2 2 0 2 2 2 1 Fusaric acid resistance protein family Dpy-30 PF05186.13 CTQ30326.1 - 0.04 13.6 0.0 0.15 11.7 0.0 2.0 1 0 0 1 1 1 0 Dpy-30 motif Aminotran_3 PF00202.21 CTQ30327.1 - 2.2e-139 464.6 0.1 2.7e-139 464.3 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 CTQ30327.1 - 0.00052 19.3 0.0 0.00099 18.4 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 CTQ30327.1 - 0.0063 15.5 0.1 0.015 14.3 0.1 1.6 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 CTQ30327.1 - 0.0072 15.6 0.0 0.015 14.6 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase DUF4038 PF13204.6 CTQ30327.1 - 0.19 11.3 0.1 3.6 7.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4038) GATase PF00117.28 CTQ30328.1 - 1.7e-53 181.2 0.0 1.9e-53 181.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 CTQ30328.1 - 3.1e-10 40.2 0.1 1.8e-09 37.7 0.1 1.8 1 1 0 1 1 1 1 Peptidase C26 Fic PF02661.18 CTQ30329.1 - 1.6e-14 54.5 0.0 2.7e-14 53.8 0.0 1.3 1 0 0 1 1 1 1 Fic/DOC family DUF2559 PF10832.8 CTQ30330.1 - 3.4e-31 107.1 2.5 3.7e-31 107.0 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2559) Pro_isomerase PF00160.21 CTQ30331.1 - 6.7e-50 169.4 1.0 7.8e-50 169.2 1.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MFS_1 PF07690.16 CTQ30332.1 - 1.6e-20 73.4 46.7 1.6e-20 73.4 46.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Phage_holin_2_3 PF16080.5 CTQ30332.1 - 0.11 12.2 1.6 0.39 10.5 0.0 2.8 2 0 0 2 2 2 0 Bacteriophage holin family HP1 AA_permease_C PF13906.6 CTQ30332.1 - 0.76 9.9 10.0 1.6 8.9 1.6 4.2 3 0 0 3 3 3 0 C-terminus of AA_permease Amidohydro_3 PF07969.11 CTQ30333.1 - 2.2e-56 192.3 0.0 2.8e-55 188.7 0.0 2.0 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 CTQ30333.1 - 3.1e-13 49.8 0.0 4e-13 49.4 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family RP-C PF03428.13 CTQ30333.1 - 0.14 11.8 0.1 0.25 11.0 0.1 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain TatD_DNase PF01026.21 CTQ30333.1 - 0.14 11.5 0.0 0.24 10.7 0.0 1.3 1 0 0 1 1 1 0 TatD related DNase Pyr_redox_2 PF07992.14 CTQ30334.1 - 5.3e-53 180.2 0.3 9.7e-53 179.3 0.3 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer2_BFD PF04324.15 CTQ30334.1 - 5.7e-21 74.6 3.2 1.2e-14 54.3 2.9 2.7 2 0 0 2 2 2 2 BFD-like [2Fe-2S] binding domain Pyr_redox PF00070.27 CTQ30334.1 - 3.6e-17 62.7 0.7 3.6e-17 62.7 0.7 3.6 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR PF01077.22 CTQ30334.1 - 5.2e-16 58.6 0.2 1.6e-15 57.0 0.0 1.9 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 CTQ30334.1 - 7.5e-11 41.7 0.0 1.9e-10 40.4 0.0 1.7 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Pyr_redox_3 PF13738.6 CTQ30334.1 - 1.6e-10 40.8 0.0 2.2e-10 40.3 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rubredoxin_C PF18267.1 CTQ30334.1 - 5e-10 39.2 0.1 1.4e-09 37.7 0.1 1.8 1 0 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain GIDA PF01134.22 CTQ30334.1 - 0.0021 17.2 0.2 0.027 13.5 0.2 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 CTQ30334.1 - 0.0025 17.8 4.5 1 9.4 0.0 3.8 2 2 2 4 4 4 1 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 CTQ30334.1 - 0.0038 16.6 0.9 0.0071 15.7 0.2 1.7 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 CTQ30334.1 - 0.015 14.0 2.1 3.9 6.1 0.1 3.1 2 1 1 3 3 3 0 HI0933-like protein K_oxygenase PF13434.6 CTQ30334.1 - 0.035 13.3 0.0 0.43 9.7 0.0 2.4 2 1 1 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.6 CTQ30334.1 - 0.037 14.5 0.1 11 6.5 0.0 2.8 2 0 0 2 2 2 0 Putative NAD(P)-binding FAD_binding_2 PF00890.24 CTQ30334.1 - 0.039 13.0 2.7 2.2 7.3 0.0 2.4 2 0 0 2 2 2 0 FAD binding domain NAD_binding_8 PF13450.6 CTQ30334.1 - 0.12 12.6 0.1 0.65 10.3 0.2 2.2 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 CTQ30334.1 - 0.17 11.1 2.7 0.18 11.0 1.4 1.5 1 1 0 1 1 1 0 FAD binding domain 3HCDH_N PF02737.18 CTQ30334.1 - 0.84 9.5 4.7 0.93 9.4 0.5 2.7 2 1 1 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DAO PF01266.24 CTQ30334.1 - 3.5 7.1 5.7 39 3.7 0.0 3.5 3 1 1 4 4 4 0 FAD dependent oxidoreductase Rieske_2 PF13806.6 CTQ30335.1 - 6.9e-39 132.0 0.0 7.6e-39 131.8 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain TP_methylase PF00590.20 CTQ30336.1 - 1.3e-48 165.7 0.1 2.1e-48 165.1 0.1 1.3 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases NAD_binding_7 PF13241.6 CTQ30336.1 - 1.1e-27 96.4 0.2 4.2e-26 91.4 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding CysG_dimeriser PF10414.9 CTQ30336.1 - 6.6e-18 64.2 4.6 6.6e-18 64.2 4.6 2.0 2 0 0 2 2 2 1 Sirohaem synthase dimerisation region Sirohm_synth_M PF14824.6 CTQ30336.1 - 4.4e-09 35.6 0.8 9.1e-09 34.6 0.2 1.9 2 0 0 2 2 2 1 Sirohaem biosynthesis protein central Radical_SAM PF04055.21 CTQ30336.1 - 0.021 15.2 0.0 0.24 11.8 0.0 2.5 3 0 0 3 3 3 0 Radical SAM superfamily Shikimate_DH PF01488.20 CTQ30336.1 - 0.081 13.0 0.0 6.2 6.9 0.0 2.6 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Pyr_redox_2 PF07992.14 CTQ30336.1 - 0.1 11.8 0.0 5.1 6.2 0.1 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase tRNA-synt_1b PF00579.25 CTQ30337.1 - 2.7e-89 299.4 0.0 3.6e-89 299.0 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) HAD_2 PF13419.6 CTQ30338.1 - 2.1e-35 122.4 0.0 3.3e-35 121.8 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ30338.1 - 3.7e-25 89.4 0.1 4.7e-25 89.1 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ30338.1 - 4.4e-15 56.6 0.2 1.1e-14 55.3 0.2 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ30338.1 - 6.3e-11 42.2 0.0 1.6e-10 40.9 0.0 1.7 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_3 PF08282.12 CTQ30338.1 - 6.5e-06 26.1 0.0 0.74 9.5 0.0 3.1 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 CTQ30338.1 - 0.00061 19.9 0.0 0.096 12.8 0.0 2.3 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Ribul_P_3_epim PF00834.19 CTQ30339.1 - 2e-91 304.8 0.0 2.3e-91 304.6 0.0 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 CTQ30339.1 - 9e-06 25.6 0.0 0.0033 17.2 0.0 2.5 2 1 0 3 3 3 2 Quinolinate phosphoribosyl transferase, C-terminal domain FMN_dh PF01070.18 CTQ30339.1 - 0.00039 19.6 2.6 0.05 12.6 0.1 2.2 2 0 0 2 2 2 2 FMN-dependent dehydrogenase TMP-TENI PF02581.17 CTQ30339.1 - 0.014 14.8 0.0 0.074 12.4 0.0 1.9 2 0 0 2 2 2 0 Thiamine monophosphate synthase PGM_PMM_II PF02879.16 CTQ30339.1 - 0.036 14.7 0.0 0.49 11.0 0.0 2.2 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IMPDH PF00478.25 CTQ30339.1 - 0.062 12.3 0.5 2.1 7.2 0.0 2.1 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain Orbi_VP5 PF00901.17 CTQ30339.1 - 0.096 11.1 0.1 0.26 9.6 0.0 1.6 2 0 0 2 2 2 0 Orbivirus outer capsid protein VP5 DUF4516 PF14990.6 CTQ30339.1 - 0.12 12.1 0.6 0.36 10.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4516) MethyltransfD12 PF02086.15 CTQ30340.1 - 4.5e-70 236.3 0.4 5.5e-70 236.0 0.4 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Cons_hypoth95 PF03602.15 CTQ30340.1 - 0.16 11.6 0.0 0.37 10.4 0.1 1.6 2 0 0 2 2 2 0 Conserved hypothetical protein 95 SPOR PF05036.13 CTQ30341.1 - 6e-12 45.8 0.0 1.1e-11 44.9 0.0 1.5 1 0 0 1 1 1 1 Sporulation related domain PBP1_TM PF14812.6 CTQ30341.1 - 0.0072 16.7 1.7 0.0072 16.7 1.7 2.6 1 1 1 2 2 2 1 Transmembrane domain of transglycosylase PBP1 at N-terminal DHQ_synthase PF01761.20 CTQ30342.1 - 7.1e-111 369.6 0.0 8.5e-111 369.3 0.0 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 CTQ30342.1 - 1.3e-15 57.8 0.1 2.7e-14 53.5 0.1 2.1 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 CTQ30342.1 - 5.1e-07 28.8 0.8 8e-06 24.9 0.1 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase SKI PF01202.22 CTQ30343.1 - 4.4e-56 189.4 0.5 4.9e-56 189.2 0.5 1.0 1 0 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 CTQ30343.1 - 8.3e-09 35.7 0.1 6.5e-07 29.6 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CTQ30343.1 - 6.9e-08 33.1 0.0 9.4e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 CTQ30343.1 - 4.5e-06 26.9 0.2 0.00037 20.7 0.0 2.4 1 1 1 2 2 2 1 Cytidylate kinase-like family Cytidylate_kin PF02224.18 CTQ30343.1 - 1.6e-05 24.7 0.6 0.00015 21.6 0.0 2.4 2 1 1 3 3 3 1 Cytidylate kinase dNK PF01712.19 CTQ30343.1 - 3e-05 24.0 0.1 0.022 14.6 0.0 2.2 2 0 0 2 2 2 2 Deoxynucleoside kinase AAA_16 PF13191.6 CTQ30343.1 - 0.00067 20.1 0.1 0.0023 18.3 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 CTQ30343.1 - 0.00085 19.8 0.0 0.0021 18.5 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CTQ30343.1 - 0.001 19.3 0.0 0.0016 18.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain TsaE PF02367.17 CTQ30343.1 - 0.0024 17.9 0.0 0.0044 17.0 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 CTQ30343.1 - 0.0025 18.3 0.2 0.0084 16.6 0.2 1.9 1 1 0 1 1 1 1 ABC transporter APS_kinase PF01583.20 CTQ30343.1 - 0.0036 17.2 0.1 0.0075 16.2 0.1 1.6 1 1 0 1 1 1 1 Adenylylsulphate kinase AAA_7 PF12775.7 CTQ30343.1 - 0.0045 16.5 0.0 0.0095 15.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_17 PF13207.6 CTQ30343.1 - 0.0088 16.5 2.5 0.065 13.7 1.4 2.7 1 1 1 2 2 2 1 AAA domain AAA_5 PF07728.14 CTQ30343.1 - 0.0092 16.0 0.0 0.023 14.7 0.0 1.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Ploopntkinase3 PF18751.1 CTQ30343.1 - 0.011 15.7 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 RNA_helicase PF00910.22 CTQ30343.1 - 0.016 15.6 0.0 0.029 14.8 0.0 1.6 1 0 0 1 1 1 0 RNA helicase AAA_PrkA PF08298.11 CTQ30343.1 - 0.023 13.6 0.0 0.043 12.7 0.0 1.4 1 0 0 1 1 1 0 PrkA AAA domain AAA_25 PF13481.6 CTQ30343.1 - 0.025 14.1 0.3 0.15 11.6 0.3 2.0 1 1 0 1 1 1 0 AAA domain AAA_2 PF07724.14 CTQ30343.1 - 0.03 14.4 1.1 0.48 10.5 1.1 2.3 1 1 1 2 2 2 0 AAA domain (Cdc48 subfamily) AAA_28 PF13521.6 CTQ30343.1 - 0.032 14.5 0.0 0.2 11.9 0.0 2.1 2 1 0 2 2 2 0 AAA domain His_biosynth PF00977.21 CTQ30343.1 - 0.037 13.5 0.1 0.047 13.1 0.1 1.2 1 0 0 1 1 1 0 Histidine biosynthesis protein AAA_29 PF13555.6 CTQ30343.1 - 0.043 13.6 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ30343.1 - 0.044 13.7 0.0 0.096 12.6 0.0 1.6 2 0 0 2 2 1 0 RsgA GTPase PduV-EutP PF10662.9 CTQ30343.1 - 0.062 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_24 PF13479.6 CTQ30343.1 - 0.071 12.8 0.0 0.095 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 CTQ30343.1 - 0.076 12.4 0.1 0.12 11.7 0.0 1.6 2 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI MMR_HSR1 PF01926.23 CTQ30343.1 - 0.078 13.1 0.1 0.4 10.8 0.1 2.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase GTP_EFTU PF00009.27 CTQ30343.1 - 0.098 12.2 0.0 0.11 12.0 0.0 1.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain IstB_IS21 PF01695.17 CTQ30343.1 - 0.1 12.3 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_14 PF13173.6 CTQ30343.1 - 0.11 12.5 0.1 0.35 10.9 0.0 1.9 1 1 1 2 2 2 0 AAA domain Secretin PF00263.21 CTQ30344.1 - 5.1e-46 156.4 0.6 1.1e-45 155.4 0.6 1.5 1 0 0 1 1 1 1 Bacterial type II and III secretion system protein Secretin_N PF03958.17 CTQ30344.1 - 3.5e-08 33.7 0.3 1.5e-06 28.5 0.0 3.1 2 1 0 2 2 2 1 Bacterial type II/III secretion system short domain STN PF07660.14 CTQ30344.1 - 7.9e-08 32.0 0.1 6.2e-05 22.7 0.0 2.7 2 0 0 2 2 2 2 Secretin and TonB N terminus short domain HofP PF10748.9 CTQ30345.1 - 4.1e-36 123.4 0.6 4.8e-36 123.2 0.6 1.0 1 0 0 1 1 1 1 DNA utilization proteins HofP DR2241 PF18069.1 CTQ30345.1 - 0.021 14.7 0.1 0.036 13.9 0.1 1.3 1 0 0 1 1 1 0 DR2241 stabilising domain PilN PF05137.13 CTQ30347.1 - 0.00029 20.9 0.0 0.00057 20.0 0.0 1.6 1 0 0 1 1 1 1 Fimbrial assembly protein (PilN) Gyro_capsid PF04162.12 CTQ30347.1 - 0.0055 15.3 0.0 0.0076 14.8 0.0 1.2 1 0 0 1 1 1 1 Gyrovirus capsid protein (VP1) PilM_2 PF11104.8 CTQ30348.1 - 1.1e-05 24.7 0.0 0.00031 19.9 0.0 2.0 2 0 0 2 2 2 2 Type IV pilus assembly protein PilM; T2SSL PF05134.13 CTQ30348.1 - 0.011 15.1 0.9 0.015 14.6 0.9 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein L Transgly PF00912.22 CTQ30349.1 - 2.6e-65 219.2 0.0 5.7e-65 218.1 0.0 1.6 1 0 0 1 1 1 1 Transglycosylase PCB_OB PF17092.5 CTQ30349.1 - 2.2e-29 102.5 1.6 4.9e-29 101.3 1.6 1.7 1 0 0 1 1 1 1 Penicillin-binding protein OB-like domain Transpeptidase PF00905.22 CTQ30349.1 - 1e-24 87.3 0.3 4.3e-23 82.0 0.0 2.7 2 1 0 2 2 2 1 Penicillin binding protein transpeptidase domain DUF3502 PF12010.8 CTQ30349.1 - 0.065 13.9 0.0 0.16 12.6 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) NUDIX PF00293.28 CTQ30350.1 - 1.3e-13 51.2 0.0 1.8e-13 50.7 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain IgaA PF07095.11 CTQ30351.1 - 0 1142.3 0.0 0 1142.1 0.0 1.0 1 0 0 1 1 1 1 Intracellular growth attenuator protein IgaA DUF4381 PF14316.6 CTQ30351.1 - 0.011 15.9 12.3 1.2 9.3 0.2 4.3 4 0 0 4 4 4 0 Domain of unknown function (DUF4381) ANTH PF07651.16 CTQ30351.1 - 0.09 11.8 0.0 0.17 10.8 0.0 1.4 1 0 0 1 1 1 0 ANTH domain HAD_2 PF13419.6 CTQ30352.1 - 2.5e-10 40.7 0.0 1e-09 38.7 0.0 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CTQ30352.1 - 2.3e-09 37.9 0.5 1.4e-06 28.8 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ30352.1 - 1.6e-07 31.9 0.5 3.1e-07 31.0 0.4 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 CTQ30352.1 - 0.0011 19.0 0.5 0.014 15.5 0.5 2.5 1 1 1 2 2 2 1 Haloacid dehalogenase-like hydrolase S4 PF01479.25 CTQ30353.1 - 4.2e-13 48.8 0.0 6.4e-13 48.2 0.0 1.3 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 CTQ30353.1 - 0.023 14.5 0.0 0.08 12.8 0.0 1.9 2 0 0 2 2 2 0 S4 domain HSP33 PF01430.19 CTQ30354.1 - 5.5e-85 285.0 0.1 6.2e-85 284.8 0.1 1.0 1 0 0 1 1 1 1 Hsp33 protein PEPCK_ATP PF01293.20 CTQ30355.1 - 1.4e-210 699.9 0.0 1.6e-210 699.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_33 PF13671.6 CTQ30355.1 - 4.5e-06 26.9 0.2 0.09 12.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 CTQ30355.1 - 0.13 11.9 0.2 0.67 9.5 0.0 2.2 3 0 0 3 3 3 0 AAA domain HATPase_c PF02518.26 CTQ30356.1 - 2.4e-20 73.1 0.0 4.4e-20 72.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ30356.1 - 6.4e-10 38.9 0.0 1.5e-09 37.7 0.0 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 CTQ30356.1 - 2.2e-08 34.4 0.1 5.9e-07 29.8 0.0 3.0 3 0 0 3 3 3 1 HAMP domain HATPase_c_2 PF13581.6 CTQ30356.1 - 0.00043 20.2 0.0 0.00091 19.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 CTQ30356.1 - 0.035 13.9 0.0 0.057 13.2 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 CTQ30357.1 - 9.6e-30 103.0 0.0 1.4e-29 102.5 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ30357.1 - 9.1e-23 80.1 0.0 2.2e-22 78.9 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal FleQ PF06490.11 CTQ30357.1 - 0.006 17.0 0.0 0.012 16.0 0.0 1.5 2 0 0 2 2 2 1 Flagellar regulatory protein FleQ GreA_GreB_N PF03449.15 CTQ30358.1 - 1.4e-26 92.4 0.5 2.1e-26 91.9 0.5 1.3 1 0 0 1 1 1 1 Transcription elongation factor, N-terminal GreA_GreB PF01272.19 CTQ30358.1 - 2.6e-22 78.5 0.0 4e-22 77.9 0.0 1.3 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term Crl PF07417.12 CTQ30358.1 - 0.088 12.9 0.1 0.17 12.0 0.0 1.5 1 1 0 1 1 1 0 Sigma factor-binding transcriptional regulator Crl Tex_N PF09371.10 CTQ30359.1 - 1.3e-72 243.3 0.8 2.2e-72 242.6 0.8 1.4 1 0 0 1 1 1 1 Tex-like protein N-terminal domain Tex_YqgF PF16921.5 CTQ30359.1 - 1.1e-50 171.3 0.3 1.8e-50 170.6 0.3 1.4 1 0 0 1 1 1 1 Tex protein YqgF-like domain HHH_3 PF12836.7 CTQ30359.1 - 9.6e-29 99.4 0.0 2e-28 98.4 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_9 PF17674.1 CTQ30359.1 - 5.2e-24 84.9 0.0 1.7e-23 83.3 0.0 2.0 1 0 0 1 1 1 1 HHH domain S1 PF00575.23 CTQ30359.1 - 5.2e-22 78.0 0.4 1.1e-21 77.0 0.4 1.5 1 0 0 1 1 1 1 S1 RNA binding domain HHH_7 PF14635.6 CTQ30359.1 - 4e-10 40.0 0.0 1.3e-09 38.3 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif YqgF PF14639.6 CTQ30359.1 - 8e-07 29.0 0.0 1.6e-06 27.9 0.0 1.5 1 0 0 1 1 1 1 Holliday-junction resolvase-like of SPT6 HHH_6 PF14579.6 CTQ30359.1 - 0.022 15.0 0.1 0.11 12.7 0.0 2.2 2 0 0 2 2 2 0 Helix-hairpin-helix motif ALIX_LYPXL_bnd PF13949.6 CTQ30359.1 - 0.068 12.5 0.2 0.13 11.5 0.2 1.4 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV FeoA PF04023.14 CTQ30360.1 - 9.6e-08 32.2 0.0 1e-07 32.1 0.0 1.1 1 0 0 1 1 1 1 FeoA domain FeoB_N PF02421.18 CTQ30361.1 - 4e-64 214.9 0.1 7.5e-64 214.0 0.1 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 CTQ30361.1 - 1.9e-49 166.6 16.7 4.4e-37 126.8 0.6 3.0 3 0 0 3 3 3 2 Nucleoside recognition FeoB_C PF07664.12 CTQ30361.1 - 6.3e-22 77.0 1.0 6.3e-22 77.0 1.0 2.7 3 0 0 3 3 2 1 Ferrous iron transport protein B C terminus MMR_HSR1 PF01926.23 CTQ30361.1 - 1.7e-19 70.0 0.0 3.2e-19 69.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 CTQ30361.1 - 5.2e-06 26.0 0.0 8.5e-06 25.3 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit FeoB_Cyto PF17910.1 CTQ30361.1 - 5.5e-06 26.8 0.0 1.1e-05 25.9 0.0 1.5 1 0 0 1 1 1 1 FeoB cytosolic helical domain RsgA_GTPase PF03193.16 CTQ30361.1 - 0.001 19.0 0.5 0.79 9.6 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 CTQ30361.1 - 0.0014 18.7 0.5 0.89 9.6 0.2 2.2 1 1 1 2 2 2 2 Dynamin family GTP_EFTU PF00009.27 CTQ30361.1 - 0.0019 17.8 0.2 0.27 10.8 0.2 2.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain ATP_bind_1 PF03029.17 CTQ30361.1 - 0.0045 16.8 0.4 0.13 12.0 0.1 2.2 1 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AIG1 PF04548.16 CTQ30361.1 - 0.16 11.2 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 AIG1 family FeoC PF09012.10 CTQ30362.1 - 7.6e-14 51.5 1.4 8.1e-14 51.4 1.4 1.0 1 0 0 1 1 1 1 FeoC like transcriptional regulator TrmB PF01978.19 CTQ30362.1 - 0.0017 18.2 0.0 0.002 18.0 0.0 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 CTQ30362.1 - 0.051 13.5 0.1 0.063 13.2 0.1 1.2 1 0 0 1 1 1 0 MarR family SelB-wing_2 PF09106.11 CTQ30362.1 - 0.055 13.7 0.2 0.097 12.9 0.1 1.6 2 0 0 2 2 2 0 Elongation factor SelB, winged helix DUF1471 PF07338.13 CTQ30363.1 - 2.4e-18 65.8 0.1 3.5e-18 65.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF4156 PF13698.6 CTQ30363.1 - 0.037 14.4 0.1 0.045 14.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) Abhydrolase_1 PF00561.20 CTQ30364.1 - 4.6e-26 92.0 0.0 5.8e-26 91.7 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 CTQ30364.1 - 6e-15 56.4 7.4 7.4e-15 56.2 7.4 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 CTQ30364.1 - 1.1e-10 41.2 0.1 2.4e-10 40.1 0.1 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 CTQ30364.1 - 0.00081 19.6 0.0 0.001 19.3 0.0 1.1 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_5 PF12695.7 CTQ30364.1 - 0.0038 17.0 0.0 0.0088 15.8 0.0 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase family PGAP1 PF07819.13 CTQ30364.1 - 0.2 11.4 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein Pribosyltran PF00156.27 CTQ30365.1 - 4.4e-06 26.3 0.0 7e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 CTQ30365.1 - 0.025 14.1 0.0 0.034 13.6 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase UPRTase PF14681.6 CTQ30365.1 - 0.033 13.6 0.0 0.048 13.1 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Atu4866 PF11512.8 CTQ30365.1 - 0.13 12.6 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Agrobacterium tumefaciens protein Atu4866 DZR PF12773.7 CTQ30365.1 - 1.1 9.3 10.7 2.1 8.4 2.8 2.3 1 1 1 2 2 2 0 Double zinc ribbon NifU PF01106.17 CTQ30367.1 - 2e-20 72.7 0.0 3.2e-20 72.1 0.0 1.4 1 0 0 1 1 1 1 NifU-like domain Fe-S_biosyn PF01521.20 CTQ30367.1 - 3.5e-13 49.7 0.0 8.6e-13 48.5 0.0 1.6 2 0 0 2 2 2 1 Iron-sulphur cluster biosynthesis Cas_Csn2 PF09711.10 CTQ30367.1 - 0.16 11.6 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csn2) GntP_permease PF02447.16 CTQ30368.1 - 4.5e-185 615.5 43.1 5.1e-185 615.3 43.1 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 CTQ30368.1 - 6.2e-29 101.1 39.4 9.1e-29 100.6 39.4 1.2 1 0 0 1 1 1 1 Citrate transporter Na_H_antiporter PF03553.14 CTQ30368.1 - 6.8e-05 22.2 17.8 6.8e-05 22.2 17.8 2.4 1 1 0 2 2 2 1 Na+/H+ antiporter family DUF3007 PF11460.8 CTQ30368.1 - 0.0088 16.3 0.8 0.04 14.2 0.8 2.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3007) Na_H_antiport_2 PF13726.6 CTQ30368.1 - 0.016 15.3 26.4 0.02 15.0 10.6 3.5 3 0 0 3 3 3 0 Na+-H+ antiporter family SpecificRecomb PF10136.9 CTQ30368.1 - 0.29 9.4 2.7 0.58 8.4 2.7 1.4 1 0 0 1 1 1 0 Site-specific recombinase Glyco_hydro_77 PF02446.17 CTQ30369.1 - 2.1e-133 445.6 0.1 2.9e-133 445.2 0.1 1.1 1 0 0 1 1 1 1 4-alpha-glucanotransferase DUF1330 PF07045.11 CTQ30369.1 - 0.037 14.3 0.2 0.082 13.3 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1330) Phosphorylase PF00343.20 CTQ30370.1 - 0 1038.3 0.0 0 1038.1 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase TPR_MalT PF17874.1 CTQ30372.1 - 4e-110 368.3 24.6 4e-110 368.3 24.6 2.7 3 0 0 3 3 3 1 MalT-like TPR region GerE PF00196.19 CTQ30372.1 - 1.5e-20 72.4 0.0 4.5e-20 70.9 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family AAA_16 PF13191.6 CTQ30372.1 - 1.8e-06 28.5 3.9 2.7e-06 27.9 0.1 3.3 2 1 1 3 3 3 1 AAA ATPase domain TPR_8 PF13181.6 CTQ30372.1 - 4.8e-06 26.4 0.3 0.11 12.8 0.1 5.7 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_2 PF07719.17 CTQ30372.1 - 0.00085 19.3 7.5 1.5 9.1 0.2 6.8 7 0 0 7 7 6 1 Tetratricopeptide repeat RPN7 PF10602.9 CTQ30372.1 - 0.0012 18.6 0.0 1.4 8.6 0.0 3.3 1 1 2 3 3 3 1 26S proteasome subunit RPN7 Sigma70_r4_2 PF08281.12 CTQ30372.1 - 0.0021 17.7 0.0 0.011 15.4 0.0 2.3 1 0 0 1 1 1 1 Sigma-70, region 4 TPR_19 PF14559.6 CTQ30372.1 - 0.0025 18.3 18.1 1.5 9.4 0.3 6.1 3 3 2 5 5 5 1 Tetratricopeptide repeat TPR_12 PF13424.6 CTQ30372.1 - 0.0034 17.6 26.8 0.053 13.8 1.2 7.4 8 1 0 8 8 8 2 Tetratricopeptide repeat HTH_23 PF13384.6 CTQ30372.1 - 0.0035 17.1 0.0 0.011 15.5 0.0 2.0 1 0 0 1 1 1 1 Homeodomain-like domain TPR_4 PF07721.14 CTQ30372.1 - 0.0038 17.7 13.0 21 6.1 0.5 7.1 8 0 0 8 8 6 0 Tetratricopeptide repeat AAA_22 PF13401.6 CTQ30372.1 - 0.0076 16.5 2.2 0.18 12.1 0.0 3.7 3 2 0 3 3 3 1 AAA domain Sigma70_r4 PF04545.16 CTQ30372.1 - 0.018 14.6 0.0 0.05 13.1 0.0 1.8 1 0 0 1 1 1 0 Sigma-70, region 4 Penicillinase_R PF03965.16 CTQ30372.1 - 0.04 14.3 0.4 0.33 11.3 0.0 2.7 2 0 0 2 2 2 0 Penicillinase repressor AAA_30 PF13604.6 CTQ30372.1 - 0.066 12.9 0.0 0.77 9.4 0.0 2.8 3 0 0 3 3 3 0 AAA domain HTH_38 PF13936.6 CTQ30372.1 - 0.084 12.7 0.0 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain ANAPC3 PF12895.7 CTQ30372.1 - 0.18 12.0 5.2 9.3 6.6 0.1 4.3 3 1 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 CTQ30372.1 - 3.9 8.6 17.0 1.2e+02 4.0 0.1 7.3 6 0 0 6 6 6 0 Tetratricopeptide repeat DeoRC PF00455.22 CTQ30373.1 - 5.9e-55 185.6 0.2 7.6e-55 185.2 0.2 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ30373.1 - 2.3e-24 84.9 0.0 4e-24 84.1 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ30373.1 - 1e-07 31.8 0.1 1.9e-07 30.9 0.1 1.4 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 CTQ30373.1 - 4.3e-06 26.3 0.0 9.4e-06 25.2 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family DUF977 PF06163.11 CTQ30373.1 - 0.00039 20.4 0.1 0.0009 19.2 0.0 1.5 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF977) CoA_trans PF01144.23 CTQ30373.1 - 0.0017 17.8 0.0 0.0024 17.3 0.0 1.3 1 0 0 1 1 1 1 Coenzyme A transferase Put_DNA-bind_N PF06971.13 CTQ30373.1 - 0.0063 16.5 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 Putative DNA-binding protein N-terminus TFIIE_alpha PF02002.17 CTQ30373.1 - 0.014 15.2 0.0 0.033 14.0 0.0 1.6 1 0 0 1 1 1 0 TFIIE alpha subunit GCD14 PF08704.10 CTQ30373.1 - 0.022 14.4 0.0 0.063 12.9 0.0 1.7 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit Phage_rep_O PF04492.13 CTQ30373.1 - 0.025 15.2 0.1 0.11 13.1 0.0 2.0 2 0 0 2 2 2 0 Bacteriophage replication protein O DDRGK PF09756.9 CTQ30373.1 - 0.029 14.0 0.2 0.048 13.2 0.2 1.3 1 0 0 1 1 1 0 DDRGK domain HTH_24 PF13412.6 CTQ30373.1 - 0.036 13.6 0.3 0.12 12.0 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DXP_reductoisom PF02670.16 CTQ30373.1 - 0.039 14.7 0.0 0.11 13.2 0.0 1.8 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Rio2_N PF09202.11 CTQ30373.1 - 0.047 13.9 0.0 1.5 9.1 0.0 2.4 2 0 0 2 2 2 0 Rio2, N-terminal HTH_Tnp_Tc3_2 PF01498.18 CTQ30373.1 - 0.051 13.8 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 Transposase MarR_2 PF12802.7 CTQ30373.1 - 0.057 13.3 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 CTQ30373.1 - 0.1 12.8 0.1 0.28 11.3 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.20 CTQ30373.1 - 0.11 12.9 0.0 0.23 11.8 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator Sigma70_r1_1 PF03979.14 CTQ30373.1 - 0.13 12.4 0.1 0.22 11.6 0.1 1.4 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 Arg_repressor PF01316.21 CTQ30373.1 - 0.36 10.6 1.8 0.45 10.3 0.5 1.8 2 0 0 2 2 2 0 Arginine repressor, DNA binding domain Rhomboid_N PF12122.8 CTQ30374.1 - 1.4e-28 98.9 0.1 2.4e-28 98.1 0.1 1.4 1 0 0 1 1 1 1 Cytoplasmic N-terminal domain of rhomboid serine protease Rhomboid PF01694.22 CTQ30374.1 - 3.4e-27 95.3 17.4 3.4e-27 95.3 17.4 1.5 2 0 0 2 2 2 1 Rhomboid family NAGLU PF05089.12 CTQ30374.1 - 0.024 13.6 0.0 0.038 12.9 0.0 1.3 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain Rhodanese PF00581.20 CTQ30375.1 - 7.7e-16 58.5 0.1 1.5e-15 57.6 0.1 1.5 1 1 0 1 1 1 1 Rhodanese-like domain DAO PF01266.24 CTQ30376.1 - 6.3e-48 164.1 0.8 7.1e-48 164.0 0.0 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO_C PF16901.5 CTQ30376.1 - 4.9e-14 52.3 0.1 1.4e-13 50.8 0.0 1.8 2 0 0 2 2 2 1 C-terminal domain of alpha-glycerophosphate oxidase Pyr_redox_2 PF07992.14 CTQ30376.1 - 0.0015 17.8 0.1 0.0079 15.5 0.1 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 CTQ30376.1 - 0.0053 16.2 3.8 0.26 10.6 2.8 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CTQ30376.1 - 0.0073 16.5 1.1 0.027 14.7 0.8 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 CTQ30376.1 - 0.011 14.8 5.4 0.54 9.3 3.9 2.2 2 0 0 2 2 2 0 FAD binding domain 3HCDH_N PF02737.18 CTQ30376.1 - 0.02 14.8 0.1 0.032 14.1 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 CTQ30376.1 - 0.24 10.4 1.5 0.4 9.7 1.5 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein GIDA PF01134.22 CTQ30376.1 - 0.36 9.9 2.2 0.56 9.2 2.2 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Phosphorylase PF00343.20 CTQ30377.1 - 0 1086.9 0.0 0 1086.7 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase Glyco_transf_5 PF08323.11 CTQ30378.1 - 4.8e-72 242.6 0.0 1.9e-71 240.6 0.0 1.8 2 0 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 CTQ30378.1 - 2.3e-13 50.1 0.0 3.5e-13 49.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 CTQ30378.1 - 3.8e-12 46.5 0.5 8.3e-11 42.2 1.6 2.5 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 CTQ30378.1 - 5.3e-10 40.0 6.6 2.9e-08 34.3 3.7 3.1 2 2 1 3 3 3 2 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 CTQ30378.1 - 2e-06 28.3 0.0 3.8e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 NTP_transferase PF00483.23 CTQ30379.1 - 5.7e-70 235.7 0.0 7e-70 235.4 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 CTQ30379.1 - 3.6e-09 37.2 0.0 5.9e-09 36.5 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 CTQ30379.1 - 0.039 12.9 0.0 0.52 9.2 0.0 2.0 2 0 0 2 2 2 0 L-fucokinase Hexapep PF00132.24 CTQ30379.1 - 0.18 11.6 2.7 0.69 9.7 0.0 2.8 2 1 1 3 3 3 0 Bacterial transferase hexapeptide (six repeats) GlgX_C PF18390.1 CTQ30380.1 - 8.1e-46 153.8 1.9 1.8e-45 152.6 1.9 1.7 1 0 0 1 1 1 1 Glycogen debranching enzyme C-terminal domain CBM_48 PF02922.18 CTQ30380.1 - 3.8e-18 65.6 0.0 1e-17 64.2 0.0 1.8 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 CTQ30380.1 - 1.4e-15 57.7 0.0 9e-06 25.5 0.0 3.1 2 1 1 3 3 3 3 Alpha amylase, catalytic domain Glyco_hydro_31 PF01055.26 CTQ30380.1 - 0.0017 17.6 0.0 0.0029 16.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 CBM_48 PF02922.18 CTQ30381.1 - 1e-30 105.9 0.2 1.5e-25 89.3 0.1 2.8 3 0 0 3 3 3 2 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase_C PF02806.18 CTQ30381.1 - 5.2e-22 78.1 0.0 9.8e-22 77.2 0.0 1.5 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 CTQ30381.1 - 6.3e-11 42.4 0.1 1.1e-07 31.7 0.0 2.4 2 1 1 3 3 3 2 Alpha amylase, catalytic domain Glyco_hydro_70 PF02324.16 CTQ30381.1 - 0.012 13.9 0.0 0.018 13.3 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 70 AMPK1_CBM PF16561.5 CTQ30381.1 - 0.11 12.7 0.1 0.75 10.0 0.1 2.3 2 0 0 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase Semialdhyde_dhC PF02774.18 CTQ30382.1 - 1.7e-61 207.5 0.0 2.1e-61 207.2 0.0 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 CTQ30382.1 - 5.9e-24 84.8 0.0 1.2e-23 83.8 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain GntP_permease PF02447.16 CTQ30384.1 - 3.4e-159 530.2 41.6 3.8e-159 530.1 41.6 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 CTQ30384.1 - 3.1e-17 62.7 36.3 4.8e-17 62.1 36.3 1.3 1 0 0 1 1 1 1 Citrate transporter Na_H_antiport_2 PF13726.6 CTQ30384.1 - 0.0056 16.8 5.5 0.0056 16.8 5.5 2.9 3 1 0 3 3 3 1 Na+-H+ antiporter family DUF4017 PF13209.6 CTQ30384.1 - 0.38 10.7 6.2 1.1 9.2 0.2 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF4017) SKI PF01202.22 CTQ30385.1 - 7.7e-12 45.6 0.0 9.2e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 CTQ30385.1 - 2.9e-07 30.7 0.0 4.6e-07 30.1 0.0 1.3 1 1 0 1 1 1 1 AAA domain APS_kinase PF01583.20 CTQ30385.1 - 4.6e-06 26.6 0.0 5.7e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_18 PF13238.6 CTQ30385.1 - 4.4e-05 24.0 0.0 6.5e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ30385.1 - 0.00024 21.5 0.0 0.00052 20.4 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ30385.1 - 0.0009 19.5 0.0 0.0013 19.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain Ploopntkinase1 PF18748.1 CTQ30385.1 - 0.004 16.7 0.0 0.83 9.1 0.0 2.3 2 1 0 2 2 2 2 P-loop Nucleotide Kinase1 Cytidylate_kin PF02224.18 CTQ30385.1 - 0.0057 16.4 0.0 0.0081 15.9 0.0 1.3 1 0 0 1 1 1 1 Cytidylate kinase Cytidylate_kin2 PF13189.6 CTQ30385.1 - 0.026 14.6 0.0 0.039 14.1 0.0 1.5 1 1 0 1 1 1 0 Cytidylate kinase-like family AAA_17 PF13207.6 CTQ30385.1 - 0.033 14.6 0.0 0.084 13.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 CTQ30385.1 - 0.035 13.3 0.0 0.037 13.3 0.0 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 CTQ30385.1 - 0.041 14.3 0.0 0.049 14.1 0.0 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 CTQ30385.1 - 0.069 12.8 0.0 12 5.5 0.0 2.1 1 1 0 2 2 2 0 Thymidylate kinase dNK PF01712.19 CTQ30385.1 - 0.072 12.9 0.1 0.45 10.3 0.0 2.0 1 1 0 2 2 2 0 Deoxynucleoside kinase Zeta_toxin PF06414.12 CTQ30385.1 - 0.089 12.1 0.0 0.13 11.5 0.0 1.3 1 1 0 1 1 1 0 Zeta toxin AAA_25 PF13481.6 CTQ30385.1 - 0.097 12.2 0.0 0.51 9.9 0.1 2.1 1 1 1 2 2 2 0 AAA domain ResIII PF04851.15 CTQ30385.1 - 0.11 12.4 0.0 0.44 10.5 0.0 1.8 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Peripla_BP_1 PF00532.21 CTQ30386.1 - 1.8e-30 106.4 0.0 2.3e-30 106.0 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ30386.1 - 1.5e-23 83.9 0.0 2.7e-23 83.1 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein-like domain LacI PF00356.21 CTQ30386.1 - 5.8e-18 64.4 0.0 1.3e-17 63.3 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 CTQ30386.1 - 1.2e-12 48.0 0.0 1.5e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_10 PF04967.12 CTQ30386.1 - 0.017 14.9 0.0 0.069 13.0 0.0 2.1 2 0 0 2 2 2 0 HTH DNA binding domain HTH_3 PF01381.22 CTQ30386.1 - 0.019 15.0 0.1 0.076 13.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix HTH_23 PF13384.6 CTQ30386.1 - 0.042 13.6 0.0 0.14 12.0 0.0 1.9 1 1 1 2 2 2 0 Homeodomain-like domain HTH_31 PF13560.6 CTQ30386.1 - 0.058 13.7 0.0 0.14 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Crp PF00325.20 CTQ30386.1 - 0.071 12.8 0.0 0.17 11.6 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family Pirin PF02678.16 CTQ30387.1 - 5e-37 126.2 0.2 7.4e-37 125.6 0.2 1.3 1 0 0 1 1 1 1 Pirin Pirin_C_2 PF17954.1 CTQ30387.1 - 8.1e-29 99.6 0.7 2.5e-28 98.1 0.3 1.9 2 0 0 2 2 2 1 Quercetinase C-terminal cupin domain Cupin_2 PF07883.11 CTQ30387.1 - 1.2e-07 31.4 0.2 5.9e-07 29.1 0.1 2.1 2 0 0 2 2 2 1 Cupin domain Pirin_C PF05726.13 CTQ30387.1 - 0.0013 19.0 0.0 0.66 10.4 0.0 2.2 2 0 0 2 2 2 2 Pirin C-terminal cupin domain 2OG-FeII_Oxy PF03171.20 CTQ30387.1 - 0.12 12.9 0.0 0.53 10.8 0.0 2.1 2 1 0 2 2 2 0 2OG-Fe(II) oxygenase superfamily GFO_IDH_MocA PF01408.22 CTQ30388.1 - 2.6e-28 99.2 0.0 3.8e-28 98.7 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 CTQ30388.1 - 4.8e-14 52.4 0.0 1e-13 51.3 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 CTQ30388.1 - 2.6e-05 24.8 0.1 4.7e-05 24.0 0.1 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Bactofilin PF04519.13 CTQ30389.1 - 9.9e-21 73.9 6.1 1.3e-20 73.5 6.1 1.2 1 0 0 1 1 1 1 Polymer-forming cytoskeletal MinC_C PF03775.16 CTQ30389.1 - 0.12 12.4 2.7 0.12 12.4 0.9 1.9 2 0 0 2 2 2 0 Septum formation inhibitor MinC, C-terminal domain Acetyltransf_1 PF00583.25 CTQ30390.1 - 3.8e-16 59.4 0.0 4.4e-16 59.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 CTQ30390.1 - 1.3e-11 44.9 0.0 1.5e-11 44.7 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ30390.1 - 4.9e-11 42.7 0.0 6e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 CTQ30390.1 - 1.2e-10 42.2 0.0 1.4e-10 42.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 CTQ30390.1 - 1.1e-07 31.7 0.2 1.6e-07 31.1 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ30390.1 - 2.8e-07 30.9 0.0 3.7e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CTQ30390.1 - 0.00029 20.9 0.0 0.0031 17.6 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ30390.1 - 0.0009 19.2 0.0 0.0015 18.4 0.0 1.4 1 1 0 1 1 1 1 FR47-like protein G_glu_transpept PF01019.21 CTQ30391.1 - 3.3e-192 639.8 0.8 3.7e-192 639.6 0.8 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase DUF2756 PF10956.8 CTQ30392.1 - 1.4e-48 163.7 30.0 1.6e-48 163.5 30.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2756) Mitofilin PF09731.9 CTQ30392.1 - 0.17 10.7 8.8 0.2 10.5 8.8 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Presenilin PF01080.17 CTQ30392.1 - 0.53 9.0 2.9 0.52 9.0 2.9 1.1 1 0 0 1 1 1 0 Presenilin GDPD PF03009.17 CTQ30393.1 - 2.5e-40 138.9 0.0 3.1e-40 138.6 0.0 1.1 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family GDPD_2 PF13653.6 CTQ30393.1 - 0.00016 22.0 2.0 0.00042 20.7 0.0 2.6 3 0 0 3 3 3 1 Glycerophosphoryl diester phosphodiesterase family ABC_tran PF00005.27 CTQ30394.1 - 2.6e-30 105.7 0.0 4.5e-30 104.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 CTQ30394.1 - 8.5e-15 55.3 0.2 3e-14 53.6 0.2 2.0 1 0 0 1 1 1 1 MalK OB fold domain TOBE_2 PF08402.10 CTQ30394.1 - 6.9e-08 32.5 0.0 2.3e-07 30.8 0.0 2.0 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 CTQ30394.1 - 1.7e-07 31.7 0.1 4.8e-07 30.3 0.1 1.9 1 0 0 1 1 1 1 CysA C-terminal regulatory domain AAA_21 PF13304.6 CTQ30394.1 - 2.4e-07 30.9 0.0 0.013 15.3 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_33 PF13671.6 CTQ30394.1 - 0.00026 21.2 0.0 0.00049 20.3 0.0 1.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ30394.1 - 0.00026 20.9 0.0 0.00049 20.0 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 CTQ30394.1 - 0.0011 19.3 0.7 0.0061 17.0 0.7 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ30394.1 - 0.0022 18.3 0.1 0.0087 16.3 0.0 1.9 2 1 0 2 2 2 1 AAA domain AAA PF00004.29 CTQ30394.1 - 0.0028 18.1 0.0 0.14 12.6 0.0 2.6 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 CTQ30394.1 - 0.0059 16.6 0.0 0.0086 16.0 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 CTQ30394.1 - 0.008 15.6 0.0 0.25 10.7 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 CTQ30394.1 - 0.011 15.2 0.0 0.037 13.4 0.0 1.7 1 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 CTQ30394.1 - 0.014 15.1 0.0 0.031 14.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 CTQ30394.1 - 0.02 15.4 0.1 0.072 13.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 CTQ30394.1 - 0.02 14.4 0.1 0.066 12.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 CTQ30394.1 - 0.043 13.7 0.2 0.24 11.3 0.0 2.1 2 0 0 2 2 2 0 NACHT domain AAA_28 PF13521.6 CTQ30394.1 - 0.057 13.7 0.0 0.14 12.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 CTQ30394.1 - 0.079 12.9 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 CTQ30394.1 - 0.086 13.2 0.0 0.38 11.1 0.0 2.0 2 0 0 2 2 2 0 RNA helicase NB-ARC PF00931.22 CTQ30394.1 - 0.11 11.6 0.1 0.19 10.9 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_23 PF13476.6 CTQ30394.1 - 0.12 12.9 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 CTQ30394.1 - 0.12 11.8 0.1 1.2 8.5 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein Zeta_toxin PF06414.12 CTQ30394.1 - 0.15 11.3 0.0 0.33 10.2 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_5 PF07728.14 CTQ30394.1 - 0.16 11.9 0.3 0.48 10.4 0.0 1.9 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) BPD_transp_1 PF00528.22 CTQ30395.1 - 1.1e-20 74.1 19.8 1.1e-20 74.1 19.8 2.1 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ30396.1 - 1.2e-18 67.5 21.4 1.2e-18 67.5 21.4 1.9 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 CTQ30397.1 - 1.2e-42 146.7 13.1 1.5e-42 146.3 13.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ30397.1 - 6.1e-35 121.7 12.8 8.5e-35 121.2 12.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ30397.1 - 0.0002 20.9 0.1 0.14 11.6 0.0 2.4 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein F_bP_aldolase PF01116.20 CTQ30397.1 - 0.0051 16.3 0.1 0.22 10.9 0.1 2.1 2 0 0 2 2 2 2 Fructose-bisphosphate aldolase class-II Fic PF02661.18 CTQ30398.1 - 1.6e-08 35.3 0.1 9.8e-08 32.8 0.1 2.0 1 1 0 1 1 1 1 Fic/DOC family PhdYeFM_antitox PF02604.19 CTQ30399.1 - 1.3e-17 63.3 0.1 1.5e-17 63.2 0.1 1.1 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system PHD_like PF12910.7 CTQ30399.1 - 0.027 14.5 0.0 0.027 14.5 0.0 1.2 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system ABC_tran PF00005.27 CTQ30400.1 - 1.6e-33 116.1 0.0 2.3e-33 115.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30400.1 - 3.5e-09 36.9 4.6 0.00014 21.8 0.3 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ30400.1 - 0.00097 18.8 0.1 0.0023 17.7 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ30400.1 - 0.0044 17.0 0.1 0.01 15.7 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 CTQ30400.1 - 0.0074 15.7 0.1 2.5 7.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ30400.1 - 0.0078 16.6 0.3 0.014 15.8 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain BCA_ABC_TP_C PF12399.8 CTQ30400.1 - 0.011 15.6 0.1 0.022 14.7 0.1 1.4 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter MMR_HSR1 PF01926.23 CTQ30400.1 - 0.021 14.9 0.1 0.032 14.3 0.1 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 CTQ30400.1 - 0.024 15.1 0.2 0.043 14.3 0.2 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CTQ30400.1 - 0.027 14.1 0.6 0.099 12.2 0.2 1.9 1 1 0 2 2 2 0 AAA domain AAA_15 PF13175.6 CTQ30400.1 - 0.029 14.1 0.1 0.056 13.2 0.1 1.3 1 0 0 1 1 1 0 AAA ATPase domain Septin PF00735.18 CTQ30400.1 - 0.032 13.5 0.0 0.049 12.9 0.0 1.2 1 0 0 1 1 1 0 Septin SbcCD_C PF13558.6 CTQ30400.1 - 0.06 13.6 0.2 0.63 10.3 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit cobW PF02492.19 CTQ30400.1 - 0.098 12.2 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 CTQ30400.1 - 0.11 12.7 0.3 0.24 11.6 0.3 2.0 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ30400.1 - 0.11 12.2 0.4 0.2 11.4 0.4 1.7 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 CTQ30400.1 - 0.11 11.3 0.1 1.7 7.3 0.1 2.5 3 0 0 3 3 3 0 Predicted ATPase of the ABC class AAA_13 PF13166.6 CTQ30400.1 - 0.12 11.0 0.0 0.17 10.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ30400.1 - 0.13 12.1 0.6 0.3 11.0 0.1 1.8 2 0 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 CTQ30400.1 - 0.18 12.0 1.0 0.83 9.9 0.2 2.0 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 CTQ30400.1 - 0.19 11.7 0.1 0.38 10.8 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 CTQ30400.1 - 0.31 11.3 1.5 0.69 10.1 1.4 1.9 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 CTQ30401.1 - 3e-32 112.0 0.0 4.6e-32 111.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 CTQ30401.1 - 2.6e-11 43.2 0.1 5.5e-11 42.1 0.1 1.6 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 CTQ30401.1 - 2.7e-07 30.7 0.4 0.0022 17.8 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 CTQ30401.1 - 2.5e-05 24.9 0.2 5.4e-05 23.8 0.3 1.7 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 CTQ30401.1 - 5.8e-05 23.0 0.3 0.035 13.8 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 CTQ30401.1 - 0.00064 20.0 0.9 0.02 15.2 0.9 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ30401.1 - 0.00087 18.8 0.1 0.21 11.0 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ30401.1 - 0.002 18.5 0.4 0.0068 16.8 0.4 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ30401.1 - 0.0078 15.9 0.0 0.016 14.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 CTQ30401.1 - 0.016 14.9 0.1 0.14 11.8 0.0 2.1 2 1 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 CTQ30401.1 - 0.036 14.0 0.0 0.082 12.8 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase FeoB_N PF02421.18 CTQ30401.1 - 0.063 12.8 0.1 0.12 11.9 0.1 1.4 1 0 0 1 1 1 0 Ferrous iron transport protein B SRP54 PF00448.22 CTQ30401.1 - 0.068 12.8 0.2 0.24 11.0 0.0 1.9 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain T2SSE PF00437.20 CTQ30401.1 - 0.081 12.0 0.2 1.9 7.5 0.0 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_33 PF13671.6 CTQ30401.1 - 0.082 13.1 0.0 0.15 12.3 0.0 1.6 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 CTQ30401.1 - 0.12 12.4 0.0 0.48 10.5 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase Rad17 PF03215.15 CTQ30401.1 - 0.14 12.1 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain BPD_transp_2 PF02653.16 CTQ30402.1 - 3.4e-60 203.5 27.9 3.4e-60 203.5 27.9 2.0 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF3382 PF11862.8 CTQ30402.1 - 1.1e-23 83.4 9.2 1.1e-23 83.4 9.2 3.2 4 1 1 5 5 5 1 Domain of unknown function (DUF3382) BPD_transp_2 PF02653.16 CTQ30403.1 - 3e-69 233.2 42.2 3.4e-69 233.0 42.2 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peripla_BP_6 PF13458.6 CTQ30404.1 - 4.6e-62 210.7 5.3 5.4e-62 210.4 5.3 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 CTQ30404.1 - 1.3e-29 103.4 0.0 1.8e-29 103.0 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 CTQ30404.1 - 1.4e-19 70.4 0.0 1.8e-19 70.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Fe-ADH PF00465.19 CTQ30404.1 - 0.0016 17.3 0.0 0.0029 16.5 0.0 1.3 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase PGM_PMM_I PF02878.16 CTQ30404.1 - 0.085 12.6 0.4 4.4 7.0 0.0 2.7 3 0 0 3 3 3 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PanZ PF12568.8 CTQ30406.1 - 7.5e-53 177.6 0.1 8.3e-53 177.5 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_1 PF00583.25 CTQ30406.1 - 2.7e-06 27.6 0.0 2.8e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ30406.1 - 3.2e-05 23.9 0.0 3.4e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ30406.1 - 0.00058 20.2 0.0 0.00082 19.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ30406.1 - 0.0034 17.3 0.1 0.0073 16.2 0.1 1.5 1 0 0 1 1 1 1 FR47-like protein Lsm_C PF14894.6 CTQ30406.1 - 0.025 14.3 0.0 8.2 6.3 0.0 2.3 2 0 0 2 2 2 0 Lsm C-terminal Peripla_BP_6 PF13458.6 CTQ30407.1 - 1.4e-57 196.0 8.1 1.6e-57 195.7 8.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 CTQ30407.1 - 3.8e-25 88.7 0.0 7.1e-25 87.8 0.0 1.4 1 1 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 CTQ30407.1 - 7.8e-19 67.9 0.0 1e-18 67.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Fe-ADH PF00465.19 CTQ30407.1 - 0.0041 16.0 0.0 0.0069 15.2 0.0 1.3 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase PGM_PMM_I PF02878.16 CTQ30407.1 - 0.0093 15.7 0.3 0.088 12.5 0.0 2.3 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Trp_Tyr_perm PF03222.13 CTQ30408.1 - 4.1e-32 111.7 27.7 6.3e-32 111.1 27.7 1.2 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 CTQ30408.1 - 2.3e-09 36.5 26.5 1.9e-08 33.4 17.9 2.9 2 1 0 2 2 2 2 Transmembrane amino acid transporter protein Aminotran_3 PF00202.21 CTQ30409.1 - 4.3e-130 434.0 0.0 4.8e-130 433.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 CTQ30409.1 - 0.00014 21.1 0.0 0.0017 17.6 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class I and II Aminotran_1_2 PF00155.21 CTQ30410.1 - 5.3e-22 78.5 0.0 7.3e-22 78.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 CTQ30410.1 - 7.9e-16 57.5 0.1 2.3e-15 56.0 0.1 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 CTQ30410.1 - 0.0096 16.3 0.0 0.024 15.0 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.12 CTQ30410.1 - 0.024 14.6 0.0 0.066 13.2 0.0 1.7 1 0 0 1 1 1 0 HTH domain HTH_24 PF13412.6 CTQ30410.1 - 0.029 13.9 0.0 0.1 12.1 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 CTQ30411.1 - 9.8e-19 66.6 1.2 7.1e-17 60.7 0.3 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 CTQ30411.1 - 1.1e-16 60.4 0.0 2e-16 59.5 0.0 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r1_2 PF00140.20 CTQ30411.1 - 0.00018 21.4 0.2 0.0005 20.0 0.2 1.7 1 0 0 1 1 1 1 Sigma-70 factor, region 1.2 KORA PF16509.5 CTQ30411.1 - 0.0011 19.2 0.6 0.42 10.9 0.2 2.5 2 0 0 2 2 2 1 TrfB plasmid transcriptional repressor HTH_10 PF04967.12 CTQ30411.1 - 0.0039 16.9 0.0 0.19 11.6 0.0 2.8 2 0 0 2 2 2 1 HTH DNA binding domain Sigma70_r3 PF04539.16 CTQ30411.1 - 0.0074 16.4 2.4 4.1 7.6 0.5 2.9 2 0 0 2 2 2 2 Sigma-70 region 3 HTH_25 PF13413.6 CTQ30411.1 - 0.021 14.7 0.9 0.54 10.2 0.1 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 CTQ30411.1 - 0.022 14.6 1.8 0.39 10.6 0.1 2.7 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain GerE PF00196.19 CTQ30411.1 - 0.027 14.0 0.0 1.3 8.7 0.0 2.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family UCR_14kD PF02271.16 CTQ30411.1 - 0.03 14.3 0.6 0.29 11.1 0.0 2.6 2 1 0 2 2 2 0 Ubiquinol-cytochrome C reductase complex 14kD subunit HTH_3 PF01381.22 CTQ30411.1 - 0.055 13.5 0.5 0.41 10.7 0.0 2.4 3 0 0 3 3 2 0 Helix-turn-helix SANT_DAMP1_like PF16282.5 CTQ30411.1 - 0.068 13.4 0.1 0.15 12.2 0.1 1.6 1 0 0 1 1 1 0 SANT/Myb-like domain of DAMP1 HTH_31 PF13560.6 CTQ30411.1 - 0.075 13.4 1.0 3 8.3 0.2 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 CTQ30411.1 - 0.078 12.8 0.1 3.2 7.7 0.1 2.7 2 0 0 2 2 2 0 Homeodomain-like domain ENT PF03735.14 CTQ30411.1 - 0.11 12.5 3.2 11 6.2 0.5 3.3 2 1 0 2 2 2 0 ENT domain DUF5412 PF17428.2 CTQ30411.1 - 0.13 12.2 0.1 0.24 11.2 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5412) MerR PF00376.23 CTQ30411.1 - 0.13 12.0 0.1 5.4 6.9 0.0 2.6 2 0 0 2 2 2 0 MerR family regulatory protein 2Fe-2S_thioredx PF01257.19 CTQ30411.1 - 0.16 11.9 0.0 0.58 10.0 0.0 1.9 2 0 0 2 2 2 0 Thioredoxin-like [2Fe-2S] ferredoxin GntR PF00392.21 CTQ30411.1 - 0.44 10.2 3.0 1.6 8.4 0.0 2.8 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family IF2_N PF04760.15 CTQ30411.1 - 1 9.2 6.4 8 6.4 0.0 3.9 5 0 0 5 5 5 0 Translation initiation factor IF-2, N-terminal region FtsX_ECD PF18075.1 CTQ30412.1 - 6.7e-16 58.7 0.0 1.1e-15 58.0 0.0 1.3 1 0 0 1 1 1 1 FtsX extracellular domain FtsX PF02687.21 CTQ30412.1 - 0.00013 22.4 3.9 0.00013 22.4 3.9 3.0 3 0 0 3 3 3 1 FtsX-like permease family Peptidase_A24 PF01478.18 CTQ30412.1 - 0.21 12.0 9.3 2.2 8.7 7.1 2.5 2 1 0 2 2 2 0 Type IV leader peptidase family DUF3951 PF13131.6 CTQ30412.1 - 2 8.7 4.8 11 6.3 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3951) ABC_tran PF00005.27 CTQ30413.1 - 4.1e-37 127.8 0.0 5.3e-37 127.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30413.1 - 1.6e-06 28.2 0.0 0.0084 15.9 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ30413.1 - 2.5e-05 23.9 0.0 5.6e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CTQ30413.1 - 0.0003 20.8 0.0 0.00053 19.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 CTQ30413.1 - 0.00071 20.0 0.1 0.00091 19.7 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 CTQ30413.1 - 0.0047 17.4 0.1 0.0071 16.9 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 CTQ30413.1 - 0.011 15.4 0.2 0.25 10.9 0.1 2.3 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 CTQ30413.1 - 0.05 13.3 0.1 0.083 12.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 CTQ30413.1 - 0.058 13.5 0.0 0.077 13.1 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.6 CTQ30413.1 - 0.077 13.3 0.3 0.19 12.0 0.1 1.7 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 CTQ30413.1 - 0.088 13.0 0.0 0.38 10.9 0.1 1.8 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 CTQ30413.1 - 0.14 12.1 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 NTPase SRP54 PF00448.22 CTQ30414.1 - 8.2e-79 263.8 1.9 1.3e-78 263.1 1.9 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 CTQ30414.1 - 7.3e-14 51.8 2.0 7.9e-14 51.6 0.4 2.0 2 0 0 2 2 1 1 SRP54-type protein, helical bundle domain Zeta_toxin PF06414.12 CTQ30414.1 - 1.3e-07 31.1 0.1 2.4e-07 30.2 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_30 PF13604.6 CTQ30414.1 - 1.1e-05 25.2 0.8 2.5e-05 24.1 0.8 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ30414.1 - 0.0001 22.6 0.2 0.00055 20.2 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 CTQ30414.1 - 0.00011 22.6 0.2 0.00037 20.9 0.2 1.9 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 CTQ30414.1 - 0.0007 20.1 0.1 0.0026 18.3 0.0 2.0 1 1 1 2 2 2 1 ABC transporter APS_kinase PF01583.20 CTQ30414.1 - 0.00075 19.4 0.0 0.0017 18.2 0.0 1.6 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_16 PF13191.6 CTQ30414.1 - 0.0013 19.2 0.1 0.0013 19.2 0.1 2.5 1 1 0 2 2 1 1 AAA ATPase domain CbiA PF01656.23 CTQ30414.1 - 0.0016 18.5 0.2 0.0083 16.2 0.2 2.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.6 CTQ30414.1 - 0.0017 18.5 0.1 0.0017 18.5 0.1 2.2 3 0 0 3 3 2 1 AAA domain AAA_31 PF13614.6 CTQ30414.1 - 0.0046 16.9 0.2 0.008 16.1 0.2 1.4 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 CTQ30414.1 - 0.0055 16.0 0.2 0.0084 15.4 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 CTQ30414.1 - 0.0068 16.8 0.1 0.015 15.7 0.1 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 CTQ30414.1 - 0.0087 15.8 0.4 0.033 13.9 0.1 2.1 2 0 0 2 2 2 1 Thymidylate kinase AAA_24 PF13479.6 CTQ30414.1 - 0.013 15.2 0.1 0.47 10.1 0.1 2.4 2 1 0 2 2 2 0 AAA domain MeaB PF03308.16 CTQ30414.1 - 0.015 14.3 0.5 0.034 13.1 0.5 1.7 1 1 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 CTQ30414.1 - 0.015 15.3 0.0 0.027 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 CTQ30414.1 - 0.048 13.6 1.3 0.64 9.9 0.3 2.4 2 0 0 2 2 2 0 NTPase MMR_HSR1 PF01926.23 CTQ30414.1 - 0.069 13.2 0.5 0.29 11.2 0.5 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase TrwB_AAD_bind PF10412.9 CTQ30414.1 - 0.078 11.9 0.3 0.21 10.4 0.1 1.7 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain ArsA_ATPase PF02374.15 CTQ30414.1 - 0.092 11.9 0.8 0.25 10.5 0.3 1.9 2 0 0 2 2 2 0 Anion-transporting ATPase AAA_5 PF07728.14 CTQ30414.1 - 0.13 12.2 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.17 CTQ30414.1 - 0.15 11.8 0.2 0.91 9.3 0.1 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_7 PF12775.7 CTQ30414.1 - 0.21 11.1 0.1 0.38 10.2 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Cons_hypoth95 PF03602.15 CTQ30415.1 - 1.5e-61 207.2 0.0 1.8e-61 207.0 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 CTQ30415.1 - 0.00017 21.1 0.0 0.00023 20.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain MethyltransfD12 PF02086.15 CTQ30415.1 - 0.014 15.1 0.0 1.7 8.3 0.0 2.1 1 1 0 2 2 2 0 D12 class N6 adenine-specific DNA methyltransferase RrnaAD PF00398.20 CTQ30415.1 - 0.07 12.2 0.0 0.095 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DUF1145 PF06611.12 CTQ30416.1 - 5.7e-27 93.5 10.2 9.4e-27 92.8 10.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1145) EutH PF04346.12 CTQ30416.1 - 0.0084 15.3 1.0 0.0091 15.2 1.0 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation protein, EutH DUF2500 PF10694.9 CTQ30417.1 - 3.7e-29 101.4 0.1 4.1e-29 101.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2500) YhhN PF07947.14 CTQ30418.1 - 7.8e-41 139.7 24.0 9.8e-41 139.4 24.0 1.1 1 0 0 1 1 1 1 YhhN family E1-E2_ATPase PF00122.20 CTQ30419.1 - 9e-47 158.9 0.8 3.3e-46 157.1 0.0 2.3 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 CTQ30419.1 - 7.5e-38 130.9 5.7 7.5e-38 130.9 5.7 1.7 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 CTQ30419.1 - 4.1e-12 46.4 0.1 9.6e-12 45.2 0.1 1.6 1 0 0 1 1 1 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 CTQ30419.1 - 8.3e-08 32.3 3.4 8.1e-06 25.8 1.6 2.6 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ30419.1 - 0.2 12.0 0.9 1.2 9.5 0.2 2.7 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase FeS_assembly_P PF01883.19 CTQ30419.1 - 0.57 10.4 3.6 5.9 7.1 0.1 4.0 5 0 0 5 5 5 0 Iron-sulfur cluster assembly protein TusA PF01206.17 CTQ30420.1 - 8.8e-26 89.5 0.0 9.8e-26 89.4 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 CTQ30420.1 - 0.00031 20.6 0.1 0.00038 20.3 0.1 1.4 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) Vut_1 PF02592.15 CTQ30421.1 - 4.6e-36 124.4 13.0 4.6e-36 124.4 13.0 1.7 2 0 0 2 2 2 1 Putative vitamin uptake transporter DUF373 PF04123.13 CTQ30421.1 - 0.32 10.4 3.4 0.45 9.9 3.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF373) DcrB PF08786.11 CTQ30422.1 - 6.2e-31 107.1 1.3 8e-31 106.8 1.3 1.1 1 0 0 1 1 1 1 DcrB MFS_1 PF07690.16 CTQ30423.1 - 8.7e-26 90.7 65.3 2e-14 53.3 48.4 2.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ30423.1 - 0.0078 15.1 21.1 0.0063 15.4 16.6 2.1 2 0 0 2 2 2 1 MFS_1 like family Gram_pos_anchor PF00746.21 CTQ30423.1 - 0.028 14.3 1.5 0.028 14.3 1.5 4.2 5 0 0 5 5 5 0 LPXTG cell wall anchor motif DUF4006 PF13179.6 CTQ30423.1 - 0.066 13.1 0.2 0.2 11.6 0.2 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF4006) MFS_3 PF05977.13 CTQ30423.1 - 0.92 7.8 19.8 0.0059 15.1 6.4 2.2 2 0 0 2 2 2 0 Transmembrane secretion effector AI-2E_transport PF01594.16 CTQ30424.1 - 3.4e-75 253.2 37.8 3.8e-75 253.1 37.8 1.0 1 0 0 1 1 1 1 AI-2E family transporter EamA PF00892.20 CTQ30425.1 - 4.8e-05 23.6 16.6 0.00011 22.4 16.6 1.6 1 1 0 1 1 1 1 EamA-like transporter family Multi_Drug_Res PF00893.19 CTQ30425.1 - 0.0026 18.4 4.5 0.0026 18.4 4.5 2.0 1 1 1 2 2 2 1 Small Multidrug Resistance protein DUF202 PF02656.15 CTQ30425.1 - 0.094 13.2 10.6 0.41 11.1 1.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF202) Fun_ATP-synt_8 PF05933.13 CTQ30425.1 - 3.3 8.0 7.0 23 5.3 0.2 3.4 2 1 1 3 3 3 0 Fungal ATP synthase protein 8 (A6L) DUF2070 PF09843.9 CTQ30425.1 - 3.4 5.8 6.2 3.9 5.7 6.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) EamA PF00892.20 CTQ30426.1 - 3.8e-14 53.0 4.3 4.3e-14 52.9 4.3 1.1 1 0 0 1 1 1 1 EamA-like transporter family Multi_Drug_Res PF00893.19 CTQ30426.1 - 8.1e-11 42.4 0.3 1.2e-10 41.9 0.3 1.2 1 0 0 1 1 1 1 Small Multidrug Resistance protein TMEM234 PF10639.9 CTQ30426.1 - 1.8e-06 28.0 0.0 2.5e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Putative transmembrane family 234 DUF2157 PF09925.9 CTQ30426.1 - 0.00011 22.0 4.8 0.00012 21.8 4.3 1.3 1 1 0 1 1 1 1 Predicted membrane protein (DUF2157) DUF202 PF02656.15 CTQ30426.1 - 0.032 14.7 7.1 0.13 12.8 7.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF5345 PF17280.2 CTQ30426.1 - 0.2 11.7 0.7 0.61 10.1 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5345) DUF3040 PF11239.8 CTQ30426.1 - 0.26 11.6 7.0 0.2 12.0 0.5 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) MCU PF04678.13 CTQ30426.1 - 0.31 11.1 0.5 0.46 10.6 0.1 1.4 2 0 0 2 2 2 0 Mitochondrial calcium uniporter DUF4131 PF13567.6 CTQ30426.1 - 0.94 9.1 12.9 0.42 10.2 7.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) PMT PF02366.18 CTQ30427.1 - 8.5e-51 172.9 17.1 8.5e-51 172.9 17.1 1.7 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT_2 PF13231.6 CTQ30427.1 - 9.6e-14 51.9 17.4 9.6e-14 51.9 17.4 2.9 2 1 1 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF2368 PF10166.9 CTQ30427.1 - 4 7.1 7.3 35 4.0 0.5 3.6 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2368) Polysacc_deac_1 PF01522.21 CTQ30428.1 - 7.4e-09 35.6 0.0 1.3e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase Epimerase PF01370.21 CTQ30429.1 - 7.6e-44 150.0 0.0 1.1e-43 149.4 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Formyl_trans_N PF00551.19 CTQ30429.1 - 1.7e-25 89.8 0.0 2.6e-25 89.2 0.0 1.3 1 0 0 1 1 1 1 Formyl transferase GDP_Man_Dehyd PF16363.5 CTQ30429.1 - 3.9e-25 89.0 0.0 5.4e-25 88.5 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Formyl_trans_C PF02911.18 CTQ30429.1 - 2.2e-18 66.3 0.0 5.4e-18 65.1 0.0 1.6 1 0 0 1 1 1 1 Formyl transferase, C-terminal domain 3Beta_HSD PF01073.19 CTQ30429.1 - 5.6e-06 25.6 0.0 8e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 CTQ30429.1 - 0.0013 18.7 0.0 0.0028 17.6 0.0 1.6 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 CTQ30429.1 - 0.0093 15.2 0.0 0.73 9.0 0.0 2.3 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 CTQ30429.1 - 0.18 10.9 0.0 0.3 10.1 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Glycos_transf_2 PF00535.26 CTQ30430.1 - 1.2e-32 113.1 0.0 1.6e-32 112.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 CTQ30430.1 - 4.4e-15 56.2 0.1 1e-14 55.0 0.1 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 CTQ30430.1 - 3.3e-06 26.8 0.0 4.6e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 CTQ30430.1 - 0.0002 21.8 0.1 0.00058 20.3 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 2 DegT_DnrJ_EryC1 PF01041.17 CTQ30431.1 - 1.3e-132 442.5 0.0 1.4e-132 442.4 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 CTQ30431.1 - 4.1e-09 36.1 0.0 6.2e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 CTQ30431.1 - 8.1e-08 31.2 0.1 1.1e-07 30.8 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 CTQ30431.1 - 4.8e-05 22.8 0.6 0.00012 21.5 0.6 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.20 CTQ30431.1 - 0.032 13.0 0.0 0.063 12.0 0.0 1.5 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain PA_decarbox PF05870.11 CTQ30432.1 - 1.2e-86 288.2 0.1 1.4e-86 288.0 0.1 1.0 1 0 0 1 1 1 1 Phenolic acid decarboxylase (PAD) MoaF PF10703.9 CTQ30432.1 - 0.0012 18.7 0.0 0.0016 18.3 0.0 1.2 1 0 0 1 1 1 1 MoaF N-terminal domain MoaF_C PF17409.2 CTQ30432.1 - 0.022 14.4 0.2 0.029 14.0 0.2 1.2 1 0 0 1 1 1 0 MoaF C-terminal domain LysR_substrate PF03466.20 CTQ30433.1 - 2.1e-20 73.0 5.8 2.1e-20 73.0 5.8 2.2 2 1 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ30433.1 - 6.3e-17 61.3 1.0 1.4e-16 60.2 1.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family SBP_bac_5 PF00496.22 CTQ30434.1 - 4.8e-86 289.1 0.2 5.9e-86 288.8 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 CTQ30435.1 - 3.7e-43 147.4 10.9 3.7e-43 147.4 10.9 1.8 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Renin_r PF07850.14 CTQ30435.1 - 0.021 15.4 0.4 0.065 13.8 0.4 1.8 1 0 0 1 1 1 0 Renin receptor-like protein BPD_transp_1 PF00528.22 CTQ30436.1 - 2.4e-27 95.9 10.4 2.4e-27 95.9 10.4 2.1 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ30436.1 - 0.0085 16.1 0.8 0.0085 16.1 0.8 3.1 2 0 0 2 2 2 1 N-terminal TM domain of oligopeptide transport permease C DUF3169 PF11368.8 CTQ30436.1 - 1.3 8.5 5.2 0.59 9.6 2.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) ABC_tran PF00005.27 CTQ30437.1 - 5.5e-22 78.8 0.0 7.4e-22 78.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30437.1 - 0.00015 21.7 0.1 0.00024 21.0 0.0 1.5 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30437.1 - 0.00053 19.5 0.0 0.00087 18.8 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ30437.1 - 0.0041 17.4 0.6 0.021 15.1 0.6 2.0 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 CTQ30438.1 - 5.7e-33 114.3 0.0 7.3e-33 114.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 CTQ30438.1 - 1.4e-06 28.6 0.3 5.5e-06 26.7 0.3 1.8 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 CTQ30438.1 - 1.1e-05 25.4 0.4 0.0022 17.9 0.2 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ30438.1 - 0.00095 19.1 0.0 0.0023 17.9 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 CTQ30438.1 - 0.0031 17.9 2.4 0.0063 16.9 2.3 1.6 1 1 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.17 CTQ30438.1 - 0.0043 16.8 0.3 1.2 8.8 0.1 2.2 2 0 0 2 2 2 2 IstB-like ATP binding protein Mg_chelatase PF01078.21 CTQ30438.1 - 0.0094 15.3 0.5 0.016 14.6 0.5 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 CTQ30438.1 - 0.011 15.7 2.3 0.062 13.2 0.0 2.2 2 0 0 2 2 2 0 NACHT domain SMC_N PF02463.19 CTQ30438.1 - 0.012 15.1 0.1 0.28 10.6 0.1 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 CTQ30438.1 - 0.025 14.7 0.0 0.044 13.9 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_25 PF13481.6 CTQ30438.1 - 0.025 14.1 2.9 0.26 10.8 2.9 2.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 CTQ30438.1 - 0.03 14.1 0.0 0.056 13.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 CTQ30438.1 - 0.041 14.3 0.0 0.15 12.5 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 CTQ30438.1 - 0.06 12.5 0.1 0.11 11.6 0.1 1.6 1 1 0 1 1 1 0 NB-ARC domain Sigma54_activat PF00158.26 CTQ30438.1 - 0.089 12.5 0.5 0.46 10.2 0.0 2.0 2 0 0 2 2 2 0 Sigma-54 interaction domain SbcCD_C PF13558.6 CTQ30438.1 - 0.17 12.1 0.2 0.7 10.2 0.2 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 CTQ30438.1 - 0.2 12.2 0.2 0.5 10.9 0.2 1.8 1 1 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 CTQ30438.1 - 0.22 11.3 0.1 0.43 10.3 0.1 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation RNA_helicase PF00910.22 CTQ30438.1 - 0.24 11.8 0.0 0.42 11.0 0.0 1.4 1 0 0 1 1 1 0 RNA helicase G-alpha PF00503.20 CTQ30438.1 - 0.28 10.3 0.0 0.33 10.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit NikR_C PF08753.11 CTQ30439.1 - 6.3e-28 96.8 6.7 8.2e-28 96.4 6.7 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 CTQ30439.1 - 1.7e-10 40.4 0.7 3.2e-10 39.6 0.7 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family DUF503 PF04456.12 CTQ30439.1 - 0.055 13.3 0.2 0.086 12.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF503) VapB_antitoxin PF09957.9 CTQ30439.1 - 0.32 10.9 1.8 0.47 10.4 0.8 1.9 2 1 0 2 2 2 0 Bacterial antitoxin of type II TA system, VapB MgtE PF01769.16 CTQ30440.1 - 1.6e-27 96.3 9.0 2.7e-27 95.6 9.0 1.4 1 0 0 1 1 1 1 Divalent cation transporter CBS PF00571.28 CTQ30440.1 - 3.4e-08 33.8 0.1 0.011 16.1 0.0 2.4 2 0 0 2 2 2 2 CBS domain HI0933_like PF03486.14 CTQ30441.1 - 2.2e-155 517.4 0.0 2.5e-155 517.2 0.0 1.0 1 0 0 1 1 1 1 HI0933-like protein FAD_binding_2 PF00890.24 CTQ30441.1 - 8.5e-11 41.6 0.7 8.4e-07 28.4 0.5 2.6 3 0 0 3 3 3 2 FAD binding domain DAO PF01266.24 CTQ30441.1 - 3.9e-10 39.8 2.2 0.00034 20.3 0.0 2.9 2 1 1 3 3 3 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 CTQ30441.1 - 2.3e-09 36.9 0.0 6.5e-09 35.4 0.0 1.8 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ30441.1 - 1.6e-08 34.2 0.3 0.0023 17.2 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 CTQ30441.1 - 1.5e-07 30.9 1.0 0.00022 20.4 0.1 2.6 3 0 0 3 3 3 2 Glucose inhibited division protein A FAD_oxidored PF12831.7 CTQ30441.1 - 3e-06 26.9 0.0 4.9e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CTQ30441.1 - 3.8e-06 27.0 1.0 9.3e-06 25.8 1.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 CTQ30441.1 - 9e-05 23.0 0.2 0.13 12.9 0.1 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 CTQ30441.1 - 0.00088 18.4 0.4 0.026 13.6 0.5 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein FAD_binding_3 PF01494.19 CTQ30441.1 - 0.00098 18.5 0.1 0.7 9.1 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain Amino_oxidase PF01593.24 CTQ30441.1 - 0.011 15.0 0.0 0.23 10.7 0.0 2.1 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 CTQ30441.1 - 0.015 15.3 0.0 0.085 12.8 0.0 2.2 1 1 0 1 1 1 0 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 CTQ30441.1 - 0.029 13.7 0.0 0.044 13.1 0.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 CTQ30441.1 - 0.067 12.4 0.1 0.14 11.4 0.1 1.5 1 0 0 1 1 1 0 Thi4 family PHO4 PF01384.20 CTQ30442.1 - 8.4e-89 297.9 18.1 9.8e-89 297.7 18.1 1.0 1 0 0 1 1 1 1 Phosphate transporter family Myc_target_1 PF15179.6 CTQ30442.1 - 0.0022 17.9 1.4 0.082 12.8 0.0 2.5 2 0 0 2 2 2 2 Myc target protein 1 UspB PF10625.9 CTQ30443.1 - 5.3e-54 180.7 0.9 6.2e-54 180.5 0.9 1.0 1 0 0 1 1 1 1 Universal stress protein B (UspB) PsbN PF02468.15 CTQ30443.1 - 2.8 7.9 0.0 2.8 7.9 0.0 2.8 3 0 0 3 3 3 0 Photosystem II reaction centre N protein (psbN) DUF1413 PF07205.11 CTQ30444.1 - 0.064 13.3 0.0 0.084 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1413) Usp PF00582.26 CTQ30445.1 - 2.6e-21 76.6 0.0 2.9e-21 76.5 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family TPP_enzyme_M PF00205.22 CTQ30445.1 - 0.049 13.4 0.0 0.72 9.6 0.0 2.6 2 1 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain ETF PF01012.21 CTQ30445.1 - 0.076 12.9 0.0 0.96 9.3 0.0 2.1 2 0 0 2 2 2 0 Electron transfer flavoprotein domain PTR2 PF00854.21 CTQ30446.1 - 3.5e-90 302.7 20.0 4.7e-90 302.3 20.0 1.1 1 0 0 1 1 1 1 POT family MFS_1 PF07690.16 CTQ30446.1 - 6e-13 48.4 61.2 7.4e-11 41.6 31.8 2.9 1 1 0 2 2 2 2 Major Facilitator Superfamily DUF5337 PF17272.2 CTQ30446.1 - 0.0036 17.1 10.8 0.21 11.4 0.4 4.1 3 0 0 3 3 3 2 Family of unknown function (DUF5337) SAM_MT PF04445.13 CTQ30447.1 - 3.5e-105 350.6 0.0 4e-105 350.4 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent methyltransferase Peptidase_M3 PF01432.20 CTQ30448.1 - 1.3e-175 585.1 0.0 1.6e-175 584.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M3 PAP2 PF01569.21 CTQ30449.1 - 5e-14 52.2 0.0 8.6e-14 51.5 0.0 1.3 1 0 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 CTQ30449.1 - 0.00019 21.2 0.1 0.00047 19.9 0.1 1.7 1 1 0 1 1 1 1 PAP2 superfamily DUF4224 PF13986.6 CTQ30449.1 - 0.022 14.7 0.2 0.052 13.4 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4224) RsmJ PF04378.13 CTQ30450.1 - 3.6e-117 389.9 0.0 4.2e-117 389.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA large subunit methyltransferase D, RlmJ Cons_hypoth95 PF03602.15 CTQ30450.1 - 0.0061 16.2 0.0 0.6 9.7 0.0 2.5 3 0 0 3 3 3 2 Conserved hypothetical protein 95 Pyr_redox_2 PF07992.14 CTQ30451.1 - 1.3e-67 228.1 0.8 1.9e-67 227.5 0.8 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 CTQ30451.1 - 9.5e-37 125.6 0.8 1.1e-35 122.2 0.3 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 CTQ30451.1 - 1.2e-16 61.0 1.6 1.4e-16 60.8 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CTQ30451.1 - 6.8e-16 58.4 2.9 1.2e-15 57.5 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CTQ30451.1 - 0.0035 16.1 0.6 8.6 4.9 0.0 3.1 3 0 0 3 3 3 2 HI0933-like protein AlaDh_PNT_C PF01262.21 CTQ30451.1 - 0.025 13.9 0.8 0.31 10.3 0.0 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 CTQ30451.1 - 0.037 13.4 0.5 0.3 10.4 0.5 2.0 2 0 0 2 2 2 0 FAD dependent oxidoreductase GIDA PF01134.22 CTQ30451.1 - 0.16 11.0 5.9 0.2 10.7 1.7 2.5 2 1 0 2 2 2 0 Glucose inhibited division protein A K_oxygenase PF13434.6 CTQ30451.1 - 0.17 11.0 0.0 0.31 10.1 0.0 1.4 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 CTQ30451.1 - 0.19 10.8 5.2 3.5 6.6 0.1 2.7 4 0 0 4 4 4 0 FAD binding domain GST_N PF02798.20 CTQ30452.1 - 2.8e-15 56.4 0.0 5.4e-15 55.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 CTQ30452.1 - 5.2e-14 52.4 0.0 1.1e-13 51.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ30452.1 - 1.4e-13 50.9 0.0 2.8e-13 50.0 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 CTQ30452.1 - 4.8e-05 23.5 0.0 7.7e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 CTQ30452.1 - 8.5e-05 22.5 0.0 0.00018 21.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 CTQ30452.1 - 0.0026 17.9 0.0 0.0047 17.1 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Fe-ADH PF00465.19 CTQ30453.1 - 3.8e-87 292.5 0.0 4.3e-87 292.3 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 CTQ30453.1 - 6.1e-12 45.8 0.0 9.3e-06 25.5 0.0 2.2 1 1 1 2 2 2 2 Iron-containing alcohol dehydrogenase CW_binding_2 PF04122.12 CTQ30453.1 - 0.024 15.3 0.2 0.24 12.1 0.0 2.5 2 0 0 2 2 2 0 Putative cell wall binding repeat 2 Trehalase PF01204.18 CTQ30454.1 - 5.9e-163 543.4 0.1 8e-163 542.9 0.1 1.2 1 0 0 1 1 1 1 Trehalase Bac_rhamnosid6H PF17389.2 CTQ30454.1 - 0.0076 15.5 0.0 0.012 14.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DUF346 PF03984.13 CTQ30454.1 - 0.031 14.0 3.5 0.04 13.7 0.1 2.6 3 0 0 3 3 3 0 Repeat of unknown function (DUF346) Glyco_hydro_36 PF17167.4 CTQ30454.1 - 0.031 13.0 0.0 0.055 12.1 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase 36 superfamily, catalytic domain Acetyltransf_3 PF13302.7 CTQ30455.1 - 1.5e-23 84.0 0.0 1.8e-23 83.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ30455.1 - 1.6e-08 34.9 0.0 1.8e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ30455.1 - 1.2e-07 32.0 0.0 1.5e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 CTQ30455.1 - 4.2e-07 29.7 0.0 1.2e-06 28.2 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ30455.1 - 0.0074 16.2 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein adh_short_C2 PF13561.6 CTQ30456.1 - 2.1e-53 181.3 0.5 2.6e-53 181.0 0.5 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 CTQ30456.1 - 3.7e-44 150.5 0.1 4.6e-44 150.2 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 CTQ30456.1 - 1.1e-10 41.8 0.2 1.6e-10 41.2 0.2 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 CTQ30456.1 - 0.0096 15.3 0.0 0.014 14.8 0.0 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) Epimerase PF01370.21 CTQ30456.1 - 0.11 11.9 0.2 0.58 9.6 0.1 1.9 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family LysR_substrate PF03466.20 CTQ30457.1 - 6.6e-44 149.8 0.2 3.3e-43 147.5 0.1 1.8 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ30457.1 - 6e-20 71.0 0.9 2e-19 69.3 1.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_IclR PF09339.10 CTQ30457.1 - 0.046 13.5 0.1 0.21 11.4 0.1 2.1 2 0 0 2 2 2 0 IclR helix-turn-helix domain Virul_fac_BrkB PF03631.15 CTQ30458.1 - 4.9e-50 170.5 16.8 6e-50 170.3 16.8 1.1 1 0 0 1 1 1 1 Virulence factor BrkB DUF5510 PF17629.2 CTQ30458.1 - 0.019 14.9 2.2 1 9.4 0.1 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5510) GtrA PF04138.14 CTQ30458.1 - 4.8 7.4 13.1 0.7 10.1 6.7 2.7 2 1 1 3 3 3 0 GtrA-like protein DUF4381 PF14316.6 CTQ30458.1 - 7.3 6.8 9.8 0.42 10.8 3.4 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4381) Sugar_tr PF00083.24 CTQ30459.1 - 8.3e-32 110.6 32.3 7.2e-23 81.2 9.5 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 CTQ30459.1 - 2.9e-27 95.5 60.5 6.2e-15 55.0 28.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily AsmA PF05170.14 CTQ30460.1 - 1e-151 506.8 0.0 1.2e-151 506.6 0.0 1.0 1 0 0 1 1 1 1 AsmA family AsmA_2 PF13502.6 CTQ30460.1 - 1.3e-17 64.1 5.9 1.2e-15 57.7 2.5 3.2 2 1 1 3 3 3 2 AsmA-like C-terminal region DUF748 PF05359.11 CTQ30460.1 - 0.021 15.0 0.9 23 5.1 0.0 4.2 3 1 2 5 5 5 0 Domain of Unknown Function (DUF748) PfkB PF00294.24 CTQ30461.1 - 1.2e-72 244.8 0.1 1.4e-72 244.6 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Peptidase_M16_C PF05193.21 CTQ30462.1 - 6.7e-20 71.9 0.0 2.3e-19 70.1 0.0 1.9 2 1 0 2 2 2 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 CTQ30462.1 - 3.8e-07 30.2 0.0 6.1e-06 26.3 0.0 2.3 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) DDR_swiveling PF18427.1 CTQ30462.1 - 0.12 12.4 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 DD-reactivating factor swiveling domain Ku_PK_bind PF08785.11 CTQ30462.1 - 0.15 12.3 0.2 1.8 8.7 0.3 2.3 2 0 0 2 2 2 0 Ku C terminal domain like SDF PF00375.18 CTQ30464.1 - 6.5e-112 374.4 40.2 7.4e-112 374.2 40.2 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family EAL PF00563.20 CTQ30465.1 - 1.3e-55 188.6 0.1 2.2e-55 187.8 0.1 1.4 1 0 0 1 1 1 1 EAL domain GAPES3 PF17154.4 CTQ30465.1 - 5.7e-51 171.6 1.3 3.8e-50 168.9 1.9 2.0 2 0 0 2 2 2 1 Gammaproteobacterial periplasmic sensor domain HAMP PF00672.25 CTQ30465.1 - 1.3e-08 35.1 0.5 3.6e-08 33.6 0.5 1.8 1 0 0 1 1 1 1 HAMP domain GGDEF PF00990.21 CTQ30465.1 - 2.7e-08 33.7 0.0 1.6e-07 31.2 0.0 2.3 2 1 1 3 3 3 1 Diguanylate cyclase, GGDEF domain CHASE8 PF17152.4 CTQ30465.1 - 0.015 15.5 0.6 0.1 12.9 0.2 2.6 3 0 0 3 3 3 0 Periplasmic sensor domain BCSC_C PF05420.11 CTQ30466.1 - 5.3e-120 400.6 14.7 8.8e-120 399.9 14.7 1.4 1 0 0 1 1 1 1 Cellulose synthase operon protein C C-terminus (BCSC_C) TPR_16 PF13432.6 CTQ30466.1 - 2.4e-26 92.1 80.3 9.1e-09 35.8 2.5 10.2 10 0 0 10 10 10 6 Tetratricopeptide repeat TPR_19 PF14559.6 CTQ30466.1 - 1.4e-25 89.6 62.4 5e-07 30.1 2.5 10.3 8 2 2 11 11 11 6 Tetratricopeptide repeat TPR_2 PF07719.17 CTQ30466.1 - 1e-15 56.5 39.3 0.014 15.5 0.0 12.3 13 0 0 13 13 13 5 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ30466.1 - 1.5e-14 53.4 64.9 0.0027 18.4 0.6 12.9 9 4 4 13 13 13 5 Tetratricopeptide repeat TPR_11 PF13414.6 CTQ30466.1 - 3.6e-12 45.8 31.3 0.0035 17.0 0.2 9.6 8 2 2 10 10 10 4 TPR repeat TPR_20 PF14561.6 CTQ30466.1 - 7.9e-12 45.3 24.1 0.0026 18.0 0.5 7.5 6 2 1 7 7 7 5 Tetratricopeptide repeat TPR_8 PF13181.6 CTQ30466.1 - 5.1e-11 41.9 15.2 0.015 15.4 0.0 9.0 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_1 PF00515.28 CTQ30466.1 - 7.6e-11 41.4 17.6 0.092 12.6 0.0 8.9 9 0 0 9 9 9 3 Tetratricopeptide repeat TPR_12 PF13424.6 CTQ30466.1 - 1e-10 41.7 46.1 0.00055 20.2 0.1 8.7 8 1 0 9 9 9 5 Tetratricopeptide repeat TPR_9 PF13371.6 CTQ30466.1 - 8.7e-09 35.4 47.8 0.049 13.8 0.6 9.1 6 2 3 9 9 9 5 Tetratricopeptide repeat TPR_7 PF13176.6 CTQ30466.1 - 1.6e-06 27.7 31.4 0.048 13.7 0.0 10.1 11 1 1 12 12 10 3 Tetratricopeptide repeat ANAPC3 PF12895.7 CTQ30466.1 - 0.00072 19.7 6.1 8 6.8 0.0 6.1 5 2 2 7 7 7 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 CTQ30466.1 - 0.0011 18.3 5.6 0.0011 18.3 5.6 7.8 4 2 4 8 8 8 3 Tetratricopeptide repeat TPR_6 PF13174.6 CTQ30466.1 - 0.0024 18.4 55.9 2.3 9.1 0.1 13.0 13 0 0 13 13 12 1 Tetratricopeptide repeat TPR_17 PF13431.6 CTQ30466.1 - 0.031 14.6 21.3 0.21 12.0 0.1 7.6 10 0 0 10 10 8 0 Tetratricopeptide repeat KAsynt_C_assoc PF16197.5 CTQ30466.1 - 0.14 12.7 0.0 0.6 10.6 0.0 2.1 1 0 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension Glyco_hydro_8 PF01270.17 CTQ30467.1 - 1.1e-115 386.2 0.1 1.3e-115 385.9 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 8 BcsB PF03170.13 CTQ30468.1 - 4.4e-221 735.5 1.3 5.1e-221 735.3 1.3 1.0 1 0 0 1 1 1 1 Bacterial cellulose synthase subunit End_N_terminal PF12218.8 CTQ30468.1 - 0.065 12.9 0.0 1.9 8.3 0.0 2.5 2 0 0 2 2 2 0 N terminal extension of bacteriophage endosialidase Glycos_transf_2 PF00535.26 CTQ30469.1 - 6.8e-34 117.1 0.0 1.1e-33 116.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 CTQ30469.1 - 1e-17 64.7 0.6 1e-17 64.7 0.6 3.2 3 1 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 CTQ30469.1 - 1.1e-17 64.7 0.0 1.8e-17 64.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Cellulose_synt PF03552.14 CTQ30469.1 - 9.3e-16 57.5 6.6 7.1e-13 48.0 3.3 3.3 1 1 2 3 3 3 2 Cellulose synthase Glyco_transf_21 PF13506.6 CTQ30469.1 - 3.5e-13 49.4 0.0 6.6e-13 48.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 PilZ PF07238.14 CTQ30469.1 - 5.5e-13 49.1 0.0 1e-12 48.3 0.0 1.4 1 0 0 1 1 1 1 PilZ domain CBP_BcsQ PF06564.12 CTQ30470.1 - 8.6e-108 359.2 1.3 9.6e-108 359.1 1.3 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ AAA_31 PF13614.6 CTQ30470.1 - 3.5e-07 30.3 0.0 5.3e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 CTQ30470.1 - 1e-05 25.6 0.0 3.4e-05 23.9 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 CTQ30470.1 - 0.014 14.6 0.0 0.021 14.0 0.0 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase MipZ PF09140.11 CTQ30470.1 - 0.059 12.7 0.0 0.55 9.5 0.0 2.0 1 1 0 1 1 1 0 ATPase MipZ CBP_BcsR PF10945.8 CTQ30471.1 - 1.1e-22 79.2 1.3 1.3e-22 79.0 1.3 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsR CBP_BcsO PF17037.5 CTQ30471.1 - 0.085 13.0 0.0 0.09 12.9 0.0 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsO CBP_GIL PF10995.8 CTQ30472.1 - 2.2e-207 689.8 0.1 2.6e-207 689.6 0.1 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis GIL CBP_BcsF PF11120.8 CTQ30473.1 - 1.4e-26 92.4 1.5 1.5e-26 92.2 1.5 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsF DUF2367 PF10164.9 CTQ30473.1 - 0.17 12.4 0.0 0.22 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) CBP_BcsG PF11658.8 CTQ30474.1 - 7.5e-236 783.5 0.0 8.4e-236 783.4 0.0 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG Glyco_hydro_8 PF01270.17 CTQ30475.1 - 1e-102 343.5 6.1 1.2e-102 343.3 6.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 8 Cellsynth_D PF03500.13 CTQ30476.1 - 1.6e-10 41.0 0.1 2e-10 40.7 0.1 1.1 1 0 0 1 1 1 1 Cellulose synthase subunit D BCSC_C PF05420.11 CTQ30477.1 - 6.7e-139 462.8 22.6 6.7e-139 462.8 22.6 2.2 2 0 0 2 2 2 1 Cellulose synthase operon protein C C-terminus (BCSC_C) TPR_19 PF14559.6 CTQ30477.1 - 5.3e-25 87.7 73.7 3.3e-06 27.5 0.2 12.3 6 5 8 14 14 14 8 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ30477.1 - 4.1e-13 48.9 74.0 7.7e-06 26.3 0.7 14.2 13 5 4 17 17 14 5 Tetratricopeptide repeat TPR_16 PF13432.6 CTQ30477.1 - 4e-09 37.0 77.8 0.0022 18.6 4.4 11.0 8 2 2 10 10 10 4 Tetratricopeptide repeat TPR_2 PF07719.17 CTQ30477.1 - 4e-07 29.6 32.6 0.15 12.2 0.4 9.9 10 0 0 10 10 8 3 Tetratricopeptide repeat ANAPC3 PF12895.7 CTQ30477.1 - 1.1e-06 28.7 22.3 1.5 9.1 0.0 7.5 4 3 2 7 7 7 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 CTQ30477.1 - 1.9e-06 27.9 25.1 0.073 13.5 0.0 9.6 11 0 0 11 11 10 3 Tetratricopeptide repeat TPR_11 PF13414.6 CTQ30477.1 - 2.5e-06 27.0 21.1 0.096 12.4 0.1 6.8 6 0 0 6 6 6 2 TPR repeat TPR_8 PF13181.6 CTQ30477.1 - 4.1e-05 23.4 13.2 1.9 8.9 0.4 7.5 9 0 0 9 9 5 2 Tetratricopeptide repeat OMP_b-brl PF13505.6 CTQ30477.1 - 0.0019 18.4 19.8 0.0056 16.8 19.8 1.9 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain DUF4919 PF16266.5 CTQ30477.1 - 0.0021 18.0 3.1 1.7 8.5 0.0 4.1 4 0 0 4 4 4 1 Domain of unknown function (DUF4919) TPR_20 PF14561.6 CTQ30477.1 - 0.006 16.9 46.3 0.66 10.3 0.0 9.7 6 3 3 10 10 10 4 Tetratricopeptide repeat TPR_1 PF00515.28 CTQ30477.1 - 0.013 15.3 16.0 0.26 11.2 0.6 6.7 7 0 0 7 7 7 0 Tetratricopeptide repeat Opacity PF02462.15 CTQ30477.1 - 0.046 13.8 1.2 0.095 12.8 0.3 2.1 2 0 0 2 2 1 0 Opacity family porin protein TPR_9 PF13371.6 CTQ30477.1 - 0.053 13.7 38.3 0.02 15.0 2.7 7.9 8 2 0 8 8 7 0 Tetratricopeptide repeat TAF1_subA PF14929.6 CTQ30477.1 - 0.1 12.0 0.0 0.25 10.7 0.0 1.6 1 0 0 1 1 1 0 TAF RNA Polymerase I subunit A TPR_4 PF07721.14 CTQ30477.1 - 0.19 12.4 0.1 0.19 12.4 0.1 13.3 13 0 0 13 13 12 0 Tetratricopeptide repeat TPR_6 PF13174.6 CTQ30477.1 - 0.72 10.6 0.0 0.72 10.6 0.0 13.9 16 0 0 16 16 14 0 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 CTQ30477.1 - 5 7.6 24.0 2.5 8.6 2.1 5.0 3 1 1 4 4 4 0 Alkyl sulfatase dimerisation BcsB PF03170.13 CTQ30478.1 - 1.7e-191 637.7 0.3 2.3e-191 637.3 0.3 1.0 1 0 0 1 1 1 1 Bacterial cellulose synthase subunit FAP PF07174.11 CTQ30478.1 - 0.46 9.9 13.5 0.75 9.2 13.5 1.4 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Glycos_transf_2 PF00535.26 CTQ30479.1 - 3.1e-33 115.0 0.0 4.8e-33 114.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 CTQ30479.1 - 3e-18 66.6 0.1 1.5e-17 64.2 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 CTQ30479.1 - 8.9e-18 64.9 3.4 8.9e-18 64.9 3.4 2.5 2 1 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 CTQ30479.1 - 2.1e-15 56.7 0.0 3.6e-15 55.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Cellulose_synt PF03552.14 CTQ30479.1 - 1e-11 44.1 7.4 2.7e-07 29.5 1.5 3.2 1 1 1 3 3 3 3 Cellulose synthase PilZ PF07238.14 CTQ30479.1 - 1e-08 35.4 0.2 2e-08 34.4 0.2 1.5 1 0 0 1 1 1 1 PilZ domain TPPK_C PF12555.8 CTQ30479.1 - 7.4 6.7 15.4 1.4 9.0 0.4 3.3 4 0 0 4 4 4 0 Thiamine pyrophosphokinase C terminal CBP_BcsQ PF06564.12 CTQ30480.1 - 7.6e-38 130.3 0.0 1e-37 129.9 0.0 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ CbiA PF01656.23 CTQ30480.1 - 5.8e-22 78.1 0.0 7.5e-22 77.7 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 CTQ30480.1 - 1.3e-15 57.8 0.0 2.2e-15 57.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 CTQ30480.1 - 1e-10 41.5 1.2 3.2e-09 36.6 0.0 2.4 2 1 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 CTQ30480.1 - 2.1e-06 27.2 0.0 3e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Anion-transporting ATPase Fer4_NifH PF00142.18 CTQ30480.1 - 3.4e-06 26.7 0.1 0.01 15.3 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.11 CTQ30480.1 - 1.1e-05 24.9 0.0 2.8e-05 23.5 0.0 1.8 1 1 0 1 1 1 1 ATPase MipZ VirC1 PF07015.11 CTQ30480.1 - 0.0026 17.1 0.1 0.0054 16.1 0.1 1.5 1 0 0 1 1 1 1 VirC1 protein CLP1_P PF16575.5 CTQ30480.1 - 0.0071 16.2 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_25 PF13481.6 CTQ30480.1 - 0.012 15.2 0.0 0.025 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CTQ30480.1 - 0.021 15.2 0.1 0.035 14.5 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain SRP54 PF00448.22 CTQ30480.1 - 0.086 12.5 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain APS_kinase PF01583.20 CTQ30480.1 - 0.16 11.9 0.0 0.29 11.0 0.0 1.5 1 1 0 1 1 1 0 Adenylylsulphate kinase CBP_BcsO PF17037.5 CTQ30481.1 - 6.9e-11 42.7 19.8 3e-09 37.3 19.8 2.2 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsO CCDC53 PF10152.9 CTQ30481.1 - 0.43 11.0 3.3 0.54 10.7 3.3 1.3 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex ABC_tran PF00005.27 CTQ30483.1 - 6.3e-32 111.0 0.0 8.5e-32 110.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 CTQ30483.1 - 3.6e-19 69.1 0.3 7.3e-19 68.1 0.3 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region IstB_IS21 PF01695.17 CTQ30483.1 - 0.0025 17.5 0.0 0.0045 16.8 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_21 PF13304.6 CTQ30483.1 - 0.0053 16.6 0.1 1.2 8.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30483.1 - 0.0062 16.0 0.0 0.012 15.1 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ30483.1 - 0.0087 16.5 0.0 0.014 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ30483.1 - 0.0087 16.3 1.2 0.025 14.9 1.2 1.9 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ30483.1 - 0.013 15.4 0.1 0.027 14.4 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 CTQ30483.1 - 0.028 14.2 0.2 0.054 13.3 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATP-synt_ab PF00006.25 CTQ30483.1 - 0.21 11.2 0.0 0.38 10.4 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Tub_N PF16322.5 CTQ30483.1 - 0.22 11.9 0.7 0.33 11.3 0.7 1.2 1 0 0 1 1 1 0 Tubby N-terminal ATPase PF06745.13 CTQ30483.1 - 0.29 10.4 0.5 1 8.6 0.2 1.8 2 0 0 2 2 2 0 KaiC ABC_tran PF00005.27 CTQ30484.1 - 5.8e-28 98.1 0.0 8e-28 97.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 CTQ30484.1 - 1.7e-19 70.1 0.1 2.8e-19 69.4 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 CTQ30484.1 - 8.5e-07 28.6 0.0 1.3e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 CTQ30484.1 - 1.9e-06 27.9 0.1 2.1e-05 24.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 CTQ30484.1 - 0.0052 17.1 1.8 1.6 9.0 0.1 2.2 2 0 0 2 2 2 2 AAA domain ABC_ATPase PF09818.9 CTQ30484.1 - 0.087 11.6 0.2 0.25 10.1 0.2 1.8 1 1 0 1 1 1 0 Predicted ATPase of the ABC class AAA_16 PF13191.6 CTQ30484.1 - 0.11 12.8 0.5 0.36 11.2 0.5 1.9 1 1 0 1 1 1 0 AAA ATPase domain Herpes_ori_bp PF02399.15 CTQ30484.1 - 0.19 9.8 0.2 0.26 9.3 0.2 1.1 1 0 0 1 1 1 0 Origin of replication binding protein AAA_29 PF13555.6 CTQ30484.1 - 0.2 11.4 0.0 0.38 10.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain BPD_transp_1 PF00528.22 CTQ30485.1 - 2.1e-30 105.8 17.2 2.3e-30 105.7 12.5 2.2 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ30485.1 - 2.4e-16 59.4 0.6 2.4e-16 59.4 0.6 3.7 4 0 0 4 4 4 2 N-terminal TM domain of oligopeptide transport permease C DUF624 PF04854.14 CTQ30485.1 - 0.096 12.8 0.1 0.096 12.8 0.1 3.0 4 0 0 4 4 4 0 Protein of unknown function, DUF624 BPD_transp_1 PF00528.22 CTQ30486.1 - 6.5e-46 156.4 15.5 6.5e-46 156.4 15.5 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 CTQ30487.1 - 2.3e-109 365.8 8.9 2.9e-109 365.5 8.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Ank_2 PF12796.7 CTQ30488.1 - 4.1e-35 120.2 14.2 4.6e-09 36.8 0.1 4.8 2 2 4 6 6 6 6 Ankyrin repeats (3 copies) Ank_5 PF13857.6 CTQ30488.1 - 8.1e-29 99.3 6.4 9.6e-09 35.3 0.1 6.3 4 2 1 6 6 6 6 Ankyrin repeats (many copies) Ank_4 PF13637.6 CTQ30488.1 - 2.1e-26 92.0 0.6 0.00024 21.6 0.0 7.4 2 2 6 8 8 8 7 Ankyrin repeats (many copies) Ank_3 PF13606.6 CTQ30488.1 - 2.9e-22 76.3 0.5 0.33 11.7 0.0 8.9 9 0 0 9 9 9 6 Ankyrin repeat Ank PF00023.30 CTQ30488.1 - 9.2e-20 70.1 13.5 0.0001 22.6 0.1 8.1 7 1 0 7 7 7 5 Ankyrin repeat PSII_Ycf12 PF05969.11 CTQ30488.1 - 3 7.9 5.1 7 6.7 0.6 2.8 2 0 0 2 2 2 0 Photosystem II complex subunit Ycf12 Sulfatase PF00884.23 CTQ30489.1 - 3.8e-46 157.9 0.1 4.8e-46 157.6 0.1 1.1 1 0 0 1 1 1 1 Sulfatase EptA_B_N PF08019.12 CTQ30489.1 - 3.6e-20 72.4 4.2 3.6e-20 72.4 4.2 1.6 2 0 0 2 2 2 1 Phosphoethanolamine transferase EptA/EptB Maff2 PF12750.7 CTQ30489.1 - 0.19 11.6 1.2 0.82 9.5 0.0 2.4 2 0 0 2 2 2 0 Maff2 family MFS_1 PF07690.16 CTQ30491.1 - 1e-31 110.2 47.3 3.9e-18 65.5 18.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ30491.1 - 0.049 12.5 33.3 0.021 13.7 4.9 3.4 3 1 0 3 3 3 0 Sugar (and other) transporter Adenine_glyco PF03352.13 CTQ30493.1 - 8.7e-81 269.9 0.0 9.9e-81 269.7 0.0 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase RBD PF02196.15 CTQ30493.1 - 0.11 12.6 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Raf-like Ras-binding domain Acetyltransf_10 PF13673.7 CTQ30494.1 - 8.4e-14 51.6 0.0 9.9e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ30494.1 - 6e-11 42.6 0.0 8.3e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ30494.1 - 1.2e-09 38.4 0.0 1.6e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 CTQ30494.1 - 0.022 14.7 0.0 0.043 13.8 0.0 1.5 1 1 0 1 1 1 0 FR47-like protein Acetyltransf_13 PF13880.6 CTQ30494.1 - 0.064 13.2 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Molybdopterin PF00384.22 CTQ30495.1 - 3.4e-104 349.2 0.0 4.2e-104 348.9 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ30495.1 - 2.7e-27 95.0 0.1 7.7e-27 93.5 0.0 1.9 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Molybdopterin_N PF18364.1 CTQ30495.1 - 3.3e-09 36.6 0.1 2.6e-08 33.7 0.1 2.4 2 0 0 2 2 2 1 Molybdopterin oxidoreductase N-terminal domain OmpA PF00691.20 CTQ30496.1 - 2.7e-23 82.2 0.4 3.8e-23 81.7 0.4 1.2 1 0 0 1 1 1 1 OmpA family Gly-zipper_Omp PF13488.6 CTQ30496.1 - 3.6e-13 49.3 15.9 8.3e-13 48.1 15.9 1.7 1 0 0 1 1 1 1 Glycine zipper Gly-zipper_YMGG PF13441.6 CTQ30496.1 - 3.6e-09 36.2 20.9 8.2e-09 35.1 20.9 1.6 1 0 0 1 1 1 1 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 CTQ30496.1 - 2.9e-05 23.8 23.1 7.6e-05 22.5 23.1 1.7 1 0 0 1 1 1 1 Glycine zipper 2TM domain Pilus_CpaD PF09476.10 CTQ30496.1 - 0.035 13.9 1.3 0.1 12.3 0.4 1.9 2 0 0 2 2 2 0 Pilus biogenesis CpaD protein (pilus_cpaD) Gly-zipper_OmpA PF13436.6 CTQ30496.1 - 0.036 13.8 24.9 0.12 12.2 24.9 2.0 1 1 0 1 1 1 0 Glycine-zipper domain Peripla_BP_1 PF00532.21 CTQ30497.1 - 1.9e-24 86.6 0.0 2.9e-24 86.0 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ30497.1 - 2.1e-24 86.7 0.1 1.9e-22 80.3 0.1 2.2 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 CTQ30497.1 - 1.7e-16 60.6 0.0 2.2e-16 60.2 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 CTQ30497.1 - 5.7e-11 42.0 0.0 3.3e-09 36.4 0.0 2.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family HTH_3 PF01381.22 CTQ30497.1 - 0.00067 19.7 0.1 0.0017 18.3 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 CTQ30497.1 - 0.0021 18.1 0.1 0.005 16.8 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 CTQ30497.1 - 0.018 15.4 1.8 0.06 13.7 0.0 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain CbiJ PF02571.14 CTQ30497.1 - 0.058 12.9 0.0 0.25 10.8 0.0 1.9 1 1 1 2 2 2 0 Precorrin-6x reductase CbiJ/CobK TetR_N PF00440.23 CTQ30497.1 - 0.061 13.1 0.3 0.35 10.7 0.1 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family AP_endonuc_2 PF01261.24 CTQ30498.1 - 1.2e-06 28.1 0.1 3.1e-05 23.5 0.0 2.2 2 0 0 2 2 2 2 Xylose isomerase-like TIM barrel PfkB PF00294.24 CTQ30499.1 - 3.3e-62 210.5 1.2 3.7e-62 210.3 1.2 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 CTQ30499.1 - 0.00017 21.0 0.0 0.00029 20.3 0.0 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase MFS_1 PF07690.16 CTQ30500.1 - 5.2e-55 186.8 51.2 8.2e-42 143.4 17.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ30500.1 - 2.4e-05 23.4 32.3 7.9e-05 21.7 32.2 2.0 1 1 0 1 1 1 1 Sugar (and other) transporter ATG22 PF11700.8 CTQ30500.1 - 0.012 14.3 18.8 0.011 14.4 16.2 1.9 1 1 1 2 2 2 0 Vacuole effluxer Atg22 like MFS_4 PF06779.14 CTQ30500.1 - 0.039 13.3 29.8 0.42 9.8 29.8 2.0 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB YrvL PF14184.6 CTQ30500.1 - 7.6 6.7 8.5 6 7.0 4.8 2.7 2 1 1 3 3 3 0 Regulatory protein YrvL 2-Hacid_dh_C PF02826.19 CTQ30501.1 - 2.4e-63 212.7 0.0 4.6e-63 211.8 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 CTQ30501.1 - 1.5e-29 102.3 0.1 1.8e-29 102.1 0.1 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 CTQ30501.1 - 0.00011 22.4 0.1 0.00084 19.5 0.0 2.2 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase DUF3053 PF11254.8 CTQ30502.1 - 2.4e-92 308.5 7.9 2.8e-92 308.3 7.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3053) MFS_1 PF07690.16 CTQ30503.1 - 6.8e-52 176.5 57.4 5e-36 124.4 24.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ30503.1 - 1.6e-29 103.1 35.3 6.1e-28 97.9 8.6 2.1 1 1 0 2 2 2 2 Sugar (and other) transporter MFS_4 PF06779.14 CTQ30503.1 - 3.5e-08 33.2 10.7 3.5e-08 33.2 10.7 2.1 1 1 0 2 2 2 1 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 CTQ30503.1 - 4.9e-05 22.3 6.3 4.9e-05 22.3 6.3 2.1 1 1 1 2 2 2 2 MFS_1 like family UPF0227 PF05728.12 CTQ30503.1 - 0.016 15.2 1.0 0.12 12.3 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) MFS_2 PF13347.6 CTQ30503.1 - 0.027 13.0 38.7 0.0062 15.1 11.6 3.3 2 2 2 4 4 4 0 MFS/sugar transport protein DUF1512 PF07431.12 CTQ30503.1 - 0.091 11.7 0.9 0.16 10.9 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1512) HTH_3 PF01381.22 CTQ30504.1 - 1.3e-05 25.1 0.0 1.9e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ30504.1 - 7.9e-05 22.9 0.0 9.6e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 CTQ30504.1 - 0.00029 21.0 0.0 0.00034 20.7 0.0 1.1 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA MerR PF00376.23 CTQ30504.1 - 0.018 14.8 0.0 0.028 14.2 0.0 1.3 1 0 0 1 1 1 0 MerR family regulatory protein UAE_UbL PF14732.6 CTQ30504.1 - 0.097 13.3 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin/SUMO-activating enzyme ubiquitin-like domain Phage_terminase PF10668.9 CTQ30504.1 - 0.12 12.3 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Phage terminase small subunit CSD PF00313.22 CTQ30506.1 - 8.8e-33 112.0 0.2 9.5e-33 111.9 0.2 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 CTQ30506.1 - 3.2e-05 23.5 0.5 5.3e-05 22.8 0.5 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain ABC_tran PF00005.27 CTQ30507.1 - 2.5e-35 122.0 0.0 5.6e-16 59.3 0.0 3.3 3 1 0 3 3 2 2 ABC transporter AAA_21 PF13304.6 CTQ30507.1 - 5.4e-19 69.1 5.7 0.00027 20.9 0.1 4.2 2 2 0 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30507.1 - 3.5e-10 39.7 0.0 0.0022 17.5 0.0 4.2 3 1 1 4 4 4 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ30507.1 - 2.9e-05 24.0 0.0 0.082 12.8 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 CTQ30507.1 - 4e-05 24.1 21.3 0.0014 19.0 2.7 3.2 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 CTQ30507.1 - 7.4e-05 23.0 2.4 0.12 12.6 0.2 3.1 3 1 0 3 3 3 2 AAA domain NACHT PF05729.12 CTQ30507.1 - 7.6e-05 22.7 0.9 0.052 13.5 0.1 2.9 3 0 0 3 3 2 1 NACHT domain MMR_HSR1 PF01926.23 CTQ30507.1 - 0.00069 19.7 0.0 0.93 9.6 0.0 2.7 3 0 0 3 3 2 2 50S ribosome-binding GTPase AAA_5 PF07728.14 CTQ30507.1 - 0.0016 18.5 0.6 1.2 9.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA PF00004.29 CTQ30507.1 - 0.0021 18.5 0.3 0.43 11.0 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 CTQ30507.1 - 0.0024 17.7 0.0 1.6 8.3 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_30 PF13604.6 CTQ30507.1 - 0.0032 17.2 9.3 0.28 10.9 0.0 3.4 4 0 0 4 4 3 2 AAA domain NB-ARC PF00931.22 CTQ30507.1 - 0.0076 15.5 0.0 1.1 8.4 0.0 2.3 2 0 0 2 2 2 1 NB-ARC domain AAA_29 PF13555.6 CTQ30507.1 - 0.008 15.9 0.1 0.74 9.6 0.0 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 CTQ30507.1 - 0.0086 16.3 0.8 0.57 10.5 0.0 3.6 3 1 0 3 3 2 1 Putative exonuclease SbcCD, C subunit AAA_24 PF13479.6 CTQ30507.1 - 0.012 15.4 0.0 0.45 10.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 CTQ30507.1 - 0.015 14.9 0.8 0.25 10.9 0.1 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 CTQ30507.1 - 0.015 15.8 5.6 0.59 10.6 0.6 2.8 3 0 0 3 3 3 0 AAA domain AAA_14 PF13173.6 CTQ30507.1 - 0.026 14.5 0.0 0.31 11.1 0.0 2.5 3 0 0 3 3 2 0 AAA domain TsaE PF02367.17 CTQ30507.1 - 0.03 14.3 0.5 1.2 9.1 0.1 2.5 2 1 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 CTQ30507.1 - 0.033 14.6 0.1 1.9 8.9 0.0 2.3 2 0 0 2 2 2 0 RNA helicase FeoB_N PF02421.18 CTQ30507.1 - 0.037 13.6 0.0 1.5 8.4 0.0 2.3 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA_28 PF13521.6 CTQ30507.1 - 0.038 14.2 5.8 0.28 11.4 0.0 3.3 3 0 0 3 3 3 0 AAA domain ATPase_2 PF01637.18 CTQ30507.1 - 0.084 12.8 0.2 1.5 8.7 0.0 2.2 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea MobB PF03205.14 CTQ30507.1 - 0.089 12.7 0.9 4.7 7.1 0.0 2.6 3 0 0 3 3 2 0 Molybdopterin guanine dinucleotide synthesis protein B Roc PF08477.13 CTQ30507.1 - 0.14 12.4 0.1 24 5.2 0.0 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran_Xtn PF12848.7 CTQ30507.1 - 0.14 12.2 10.7 0.16 12.0 9.3 1.8 1 1 0 1 1 1 0 ABC transporter PduV-EutP PF10662.9 CTQ30507.1 - 0.17 11.6 1.3 1.8 8.3 0.2 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_11 PF13086.6 CTQ30507.1 - 0.29 10.9 2.8 8 6.2 2.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 CTQ30507.1 - 0.32 10.6 0.0 0.32 10.6 0.0 3.7 4 0 0 4 4 4 0 AAA domain AAA_33 PF13671.6 CTQ30507.1 - 0.35 11.0 0.0 0.35 11.0 0.0 3.4 3 1 0 3 3 3 0 AAA domain AAA_13 PF13166.6 CTQ30507.1 - 0.4 9.3 2.3 31 3.0 0.0 2.9 3 0 0 3 3 3 0 AAA domain AAA_18 PF13238.6 CTQ30507.1 - 0.49 10.9 5.7 1.7 9.2 0.0 3.3 4 0 0 4 4 2 0 AAA domain SRP54 PF00448.22 CTQ30507.1 - 0.92 9.1 4.3 8.2 6.0 0.0 2.9 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain HOK_GEF PF01848.16 CTQ30508.1 - 1.4e-21 75.6 3.5 1.7e-21 75.3 3.5 1.1 1 0 0 1 1 1 1 Hok/gef family tRNA_synt_2f PF02092.17 CTQ30509.1 - 1.2e-215 717.5 0.0 1.7e-215 717.0 0.0 1.2 1 0 0 1 1 1 1 Glycyl-tRNA synthetase beta subunit DALR_1 PF05746.15 CTQ30509.1 - 9.1e-08 32.3 1.3 2.4e-07 30.9 1.3 1.7 1 0 0 1 1 1 1 DALR anticodon binding domain tRNA-synt_2e PF02091.15 CTQ30510.1 - 3.3e-150 498.9 0.0 3.8e-150 498.7 0.0 1.0 1 0 0 1 1 1 1 Glycyl-tRNA synthetase alpha subunit YsaB PF13983.6 CTQ30511.1 - 6.1e-45 151.4 1.7 7.1e-45 151.2 1.7 1.0 1 0 0 1 1 1 1 YsaB-like lipoprotein Acyl_transf_3 PF01757.22 CTQ30512.1 - 3.7e-26 92.0 37.4 4.6e-26 91.7 37.4 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF1600 PF07667.11 CTQ30512.1 - 0.16 12.1 7.3 0.36 11.0 5.6 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1600) YiaAB PF05360.14 CTQ30513.1 - 6.6e-41 138.3 12.1 3.5e-21 75.2 1.2 2.1 2 0 0 2 2 2 2 yiaA/B two helix domain AbrB PF05145.12 CTQ30513.1 - 0.015 14.3 1.5 0.019 14.0 1.5 1.1 1 0 0 1 1 1 0 Transition state regulatory protein AbrB Wzy_C_2 PF11846.8 CTQ30513.1 - 0.04 13.8 1.3 0.33 10.9 0.1 2.0 2 0 0 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal DUF4956 PF16316.5 CTQ30513.1 - 0.041 13.5 1.5 0.044 13.5 0.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4956) DUF1218 PF06749.12 CTQ30513.1 - 0.17 12.4 10.3 0.34 11.4 0.3 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1218) Colicin_V PF02674.16 CTQ30513.1 - 0.75 9.8 10.0 5.9 6.9 10.4 2.2 1 1 0 1 1 1 0 Colicin V production protein MARVEL PF01284.23 CTQ30513.1 - 0.98 9.4 9.9 0.21 11.6 4.9 1.9 1 1 1 2 2 2 0 Membrane-associating domain DUF308 PF03729.13 CTQ30513.1 - 1.1 9.6 13.0 5.3 7.4 0.9 2.3 2 0 0 2 2 2 0 Short repeat of unknown function (DUF308) DUF3040 PF11239.8 CTQ30513.1 - 2.7 8.3 8.7 1.8 8.9 2.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) DUF202 PF02656.15 CTQ30513.1 - 4 8.0 9.4 6.1 7.4 0.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF202) FA_desaturase PF00487.24 CTQ30513.1 - 6.4 6.5 12.2 9.2 6.0 8.3 1.9 1 1 1 2 2 2 0 Fatty acid desaturase YiaAB PF05360.14 CTQ30514.1 - 1.8e-19 69.7 9.4 3.5e-12 46.4 0.6 2.1 2 0 0 2 2 2 2 yiaA/B two helix domain PsaL PF02605.15 CTQ30514.1 - 0.015 15.0 0.3 0.03 14.0 0.1 1.7 2 1 0 2 2 2 0 Photosystem I reaction centre subunit XI DUF998 PF06197.13 CTQ30514.1 - 0.13 11.9 9.9 1.3 8.6 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF998) Peptidase_M50B PF13398.6 CTQ30514.1 - 0.23 11.1 6.3 0.097 12.3 0.8 2.0 1 1 1 2 2 2 0 Peptidase M50B-like FGGY_N PF00370.21 CTQ30515.1 - 1.7e-81 273.4 0.0 2.2e-81 273.0 0.0 1.1 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 CTQ30515.1 - 1.7e-33 116.1 1.5 3.1e-33 115.2 1.5 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 CTQ30515.1 - 0.0011 18.5 0.1 0.016 14.7 0.0 2.1 2 0 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family AP_endonuc_2 PF01261.24 CTQ30516.1 - 8.5e-05 22.1 0.0 0.0071 15.8 0.0 2.2 1 1 1 2 2 2 2 Xylose isomerase-like TIM barrel Peripla_BP_4 PF13407.6 CTQ30517.1 - 3.3e-61 207.1 13.2 4e-61 206.8 13.2 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ30517.1 - 1.8e-13 50.5 1.6 3.3e-13 49.7 1.6 1.4 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ30517.1 - 4.3e-05 23.9 0.1 9.9e-05 22.7 0.1 1.5 2 0 0 2 2 2 1 Periplasmic binding protein-like domain ABC_tran PF00005.27 CTQ30518.1 - 1.1e-52 178.2 0.1 3.7e-30 105.2 0.1 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ30518.1 - 4.4e-12 46.4 0.1 9e-05 22.4 0.0 3.1 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30518.1 - 0.00056 19.4 1.8 0.58 9.6 0.1 3.1 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ30518.1 - 0.0009 18.9 0.0 0.003 17.3 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ30518.1 - 0.0027 18.2 0.0 0.0068 16.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CTQ30518.1 - 0.0086 16.0 0.2 0.046 13.6 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase AAA_15 PF13175.6 CTQ30518.1 - 0.01 15.6 0.0 0.02 14.6 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain MCM PF00493.23 CTQ30518.1 - 0.01 14.9 0.0 0.022 13.8 0.0 1.5 1 0 0 1 1 1 0 MCM P-loop domain ABC_ATPase PF09818.9 CTQ30518.1 - 0.012 14.4 2.0 4.5 6.0 0.1 3.3 3 1 0 3 3 3 0 Predicted ATPase of the ABC class DEAD PF00270.29 CTQ30518.1 - 0.014 15.2 1.0 3.9 7.2 0.5 2.9 2 1 0 2 2 2 0 DEAD/DEAH box helicase SbcCD_C PF13558.6 CTQ30518.1 - 0.016 15.4 0.1 1 9.6 0.0 3.0 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 CTQ30518.1 - 0.019 14.7 0.0 0.11 12.2 0.0 2.2 2 1 0 2 2 2 0 AAA domain AAA_22 PF13401.6 CTQ30518.1 - 0.031 14.6 8.7 0.076 13.3 2.9 3.3 3 1 0 3 3 3 0 AAA domain TniB PF05621.11 CTQ30518.1 - 0.033 13.6 0.7 0.35 10.2 0.1 2.6 3 0 0 3 3 3 0 Bacterial TniB protein AAA_25 PF13481.6 CTQ30518.1 - 0.036 13.7 0.7 0.31 10.6 0.1 2.7 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 CTQ30518.1 - 0.045 13.9 0.5 0.37 10.9 0.5 2.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CTQ30518.1 - 0.045 14.1 1.1 0.85 10.0 0.4 2.8 2 1 1 3 3 3 0 AAA ATPase domain TsaE PF02367.17 CTQ30518.1 - 0.061 13.3 0.1 1.1 9.3 0.0 2.6 3 0 0 3 3 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 CTQ30518.1 - 0.1 12.5 0.1 0.29 11.0 0.0 1.8 2 0 0 2 2 2 0 NACHT domain DLIC PF05783.11 CTQ30518.1 - 0.17 10.7 0.0 0.41 9.4 0.0 1.5 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) G-alpha PF00503.20 CTQ30518.1 - 0.23 10.6 0.0 0.37 9.9 0.0 1.4 1 0 0 1 1 1 0 G-protein alpha subunit BPD_transp_2 PF02653.16 CTQ30519.1 - 1.4e-47 162.1 51.5 1.4e-47 162.1 51.5 2.0 2 1 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF1072 PF06380.11 CTQ30519.1 - 0.26 11.2 3.5 1.8 8.5 3.5 2.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) Peripla_BP_3 PF13377.6 CTQ30520.1 - 2.7e-36 125.4 0.0 5.6e-36 124.4 0.0 1.5 1 0 0 1 1 1 1 Periplasmic binding protein-like domain HTH_AraC PF00165.23 CTQ30520.1 - 3.2e-23 81.3 0.0 1.2e-12 47.6 0.1 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 CTQ30520.1 - 1.1e-19 70.4 0.0 3.3e-19 68.9 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain Peripla_BP_4 PF13407.6 CTQ30520.1 - 1.5e-09 37.8 0.0 2.5e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain Glucosaminidase PF01832.20 CTQ30521.1 - 1.1e-17 64.2 0.3 1.9e-17 63.5 0.3 1.3 1 0 0 1 1 1 1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Alpha-amylase PF00128.24 CTQ30522.1 - 2.7e-38 132.4 8.6 9.3e-38 130.6 8.6 1.9 1 1 0 1 1 1 1 Alpha amylase, catalytic domain DUF5484 PF17583.2 CTQ30522.1 - 0.13 12.0 5.8 0.86 9.3 0.0 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5484) Aminotran_1_2 PF00155.21 CTQ30523.1 - 2.7e-21 76.1 0.0 1.4e-20 73.8 0.0 1.8 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 CTQ30523.1 - 0.004 16.5 0.0 0.007 15.7 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_MocR PF12897.7 CTQ30523.1 - 0.023 13.5 0.0 0.14 10.9 0.0 2.1 2 1 0 2 2 2 0 Alanine-glyoxylate amino-transferase Cys_Met_Meta_PP PF01053.20 CTQ30523.1 - 0.059 11.9 0.0 0.088 11.3 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Fer4_7 PF12838.7 CTQ30524.1 - 3.1e-13 50.1 32.4 6.9e-06 26.6 10.8 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 CTQ30524.1 - 6.1e-13 48.0 37.7 7.6e-08 31.9 1.2 5.7 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_11 PF13247.6 CTQ30524.1 - 9.1e-13 48.2 15.9 9.1e-13 48.2 15.9 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ30524.1 - 1.2e-12 47.7 30.1 2e-06 27.9 12.4 2.5 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ30524.1 - 1.6e-12 46.9 38.2 9e-06 25.6 2.3 4.8 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_2 PF12797.7 CTQ30524.1 - 2.5e-11 42.9 36.5 1.1e-05 25.2 2.3 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_10 PF13237.6 CTQ30524.1 - 2.5e-09 37.1 35.3 1.4e-06 28.3 12.0 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 CTQ30524.1 - 3.2e-09 37.6 29.4 0.0087 17.0 1.1 4.4 3 1 1 4 4 4 4 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 CTQ30524.1 - 4.7e-07 29.8 41.0 0.00059 20.1 3.4 5.4 4 2 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 CTQ30524.1 - 1.3e-06 28.4 32.4 0.0025 17.9 11.8 3.5 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 CTQ30524.1 - 1.1e-05 25.9 46.0 0.0093 16.8 6.0 4.5 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_8 PF13183.6 CTQ30524.1 - 2.1e-05 24.9 32.2 0.0004 20.8 9.4 3.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 CTQ30524.1 - 0.024 15.2 35.0 0.12 13.0 2.8 4.3 1 1 5 6 6 6 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 CTQ30524.1 - 0.04 14.5 1.9 0.04 14.5 1.9 4.7 3 2 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 CTQ30524.1 - 0.05 14.3 0.6 0.05 14.3 0.6 4.0 3 1 0 3 3 3 0 4Fe-4S single cluster domain Fer4_5 PF12801.7 CTQ30524.1 - 0.057 13.4 5.3 2 8.4 0.2 2.6 3 0 0 3 3 3 0 4Fe-4S binding domain ETF_QO PF05187.13 CTQ30524.1 - 0.068 13.3 13.2 0.35 11.0 1.6 2.5 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_20 PF14691.6 CTQ30524.1 - 0.24 11.2 37.4 0.097 12.4 2.6 4.1 1 1 3 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GTP_EFTU PF00009.27 CTQ30525.1 - 6.6e-33 113.9 0.1 2.6e-32 111.9 0.1 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SelB-wing_3 PF09107.11 CTQ30525.1 - 2.8e-18 65.3 1.3 7e-18 64.0 1.3 1.8 1 0 0 1 1 1 1 Elongation factor SelB, winged helix SelB-wing_2 PF09106.11 CTQ30525.1 - 9.5e-15 54.6 3.4 9.5e-15 54.6 3.4 3.1 4 0 0 4 4 4 1 Elongation factor SelB, winged helix GTP_EFTU_D2 PF03144.25 CTQ30525.1 - 3.7e-08 33.6 0.1 9.1e-08 32.4 0.1 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CTQ30525.1 - 4.2e-06 26.8 0.0 9.1e-06 25.7 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 CTQ30525.1 - 0.019 14.8 0.0 0.051 13.5 0.0 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 4 PduV-EutP PF10662.9 CTQ30525.1 - 0.028 14.2 0.0 8.3 6.2 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 CTQ30525.1 - 0.039 13.4 0.0 0.074 12.5 0.0 1.5 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit eIF2_C PF09173.11 CTQ30525.1 - 0.13 12.5 0.0 0.62 10.4 0.0 2.2 2 0 0 2 2 2 0 Initiation factor eIF2 gamma, C terminal SelA PF03841.13 CTQ30526.1 - 1.3e-176 587.1 0.0 1.5e-176 586.9 0.0 1.0 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Se-cys_synth_N PF12390.8 CTQ30526.1 - 3.3e-10 40.0 1.5 3.3e-10 40.0 1.5 3.6 3 0 0 3 3 3 1 Selenocysteine synthase N terminal Aminotran_5 PF00266.19 CTQ30526.1 - 0.0023 17.0 1.2 0.0037 16.3 0.1 1.8 2 1 0 2 2 2 1 Aminotransferase class-V PKS_DE PF18369.1 CTQ30526.1 - 0.51 10.9 3.8 19 5.9 0.5 3.0 2 0 0 2 2 2 0 Polyketide synthase dimerisation element domain GST_N_3 PF13417.6 CTQ30527.1 - 1.6e-17 63.6 0.0 2.6e-17 63.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ30527.1 - 6.7e-11 42.3 0.0 1.1e-10 41.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 CTQ30527.1 - 2e-07 31.2 0.0 8e-07 29.3 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 CTQ30527.1 - 3e-07 30.6 0.0 4e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain HlyD PF00529.20 CTQ30528.1 - 0.0055 16.6 0.0 0.0055 16.6 0.0 1.0 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS TetR_C_6 PF13977.6 CTQ30528.1 - 0.067 13.4 0.0 0.067 13.4 0.0 1.0 1 0 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal PTS_EIIA_2 PF00359.22 CTQ30529.1 - 2.4e-33 115.0 0.0 4.1e-33 114.3 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PTS_EIIC PF02378.18 CTQ30529.1 - 2e-21 76.3 37.2 2.3e-21 76.2 32.0 3.2 2 1 0 2 2 2 1 Phosphotransferase system, EIIC PTS_IIB PF02302.17 CTQ30529.1 - 7.2e-10 39.4 0.0 2.1e-09 37.9 0.0 1.8 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF2975 PF11188.8 CTQ30529.1 - 3.5 7.5 8.1 5.7 6.8 0.6 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2975) Mannitol_dh_C PF08125.13 CTQ30530.1 - 3.9e-69 232.9 0.0 7.1e-69 232.0 0.0 1.4 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 CTQ30530.1 - 4.2e-27 95.2 0.1 8.3e-27 94.2 0.1 1.5 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain 3HCDH_N PF02737.18 CTQ30530.1 - 0.0088 15.9 0.2 0.025 14.4 0.2 1.8 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 CTQ30530.1 - 0.042 14.1 0.4 0.11 12.8 0.4 1.8 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain MtlR PF05068.12 CTQ30531.1 - 7.3e-62 208.2 0.0 8.7e-62 208.0 0.0 1.1 1 0 0 1 1 1 1 Mannitol repressor DNA_pol3_theta PF06440.11 CTQ30532.1 - 0.00012 21.7 0.1 0.00015 21.3 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase III, theta subunit DUF2810 PF10928.8 CTQ30533.1 - 3.8e-34 116.5 1.2 6.6e-34 115.7 1.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2810) DUF825 PF05695.12 CTQ30533.1 - 0.14 9.3 0.0 0.14 9.3 0.0 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF825) DUF1192 PF06698.11 CTQ30533.1 - 0.22 11.6 7.6 0.24 11.5 2.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) ACCA PF03255.14 CTQ30533.1 - 0.51 10.2 4.5 0.63 9.9 4.5 1.2 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YabA PF06156.13 CTQ30533.1 - 0.68 10.6 4.9 1.3 9.7 4.9 1.6 1 1 0 1 1 1 0 Initiation control protein YabA ABC_tran_CTD PF16326.5 CTQ30533.1 - 1.5 9.2 10.8 0.34 11.2 6.7 2.1 1 1 1 2 2 2 0 ABC transporter C-terminal domain HALZ PF02183.18 CTQ30533.1 - 2 8.7 8.1 0.53 10.6 0.5 3.0 2 1 1 3 3 3 0 Homeobox associated leucine zipper CHD5 PF04420.14 CTQ30533.1 - 2.4 8.0 6.4 1.8 8.4 5.4 1.3 1 1 0 1 1 1 0 CHD5-like protein DivIC PF04977.15 CTQ30533.1 - 2.6 7.9 9.8 3.4 7.5 5.5 2.5 1 1 1 2 2 2 0 Septum formation initiator FlaC_arch PF05377.11 CTQ30533.1 - 2.9 8.3 9.3 11 6.5 1.5 2.7 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Lactate_perm PF02652.14 CTQ30534.1 - 7.9e-229 760.7 40.3 8.9e-229 760.5 40.3 1.0 1 0 0 1 1 1 1 L-lactate permease FCD PF07729.12 CTQ30535.1 - 1.4e-23 83.6 8.7 1.4e-23 83.6 8.7 1.9 3 0 0 3 3 3 1 FCD domain GntR PF00392.21 CTQ30535.1 - 1.7e-21 75.6 1.8 3.4e-21 74.7 1.8 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 CTQ30535.1 - 0.0014 18.9 0.0 0.0028 18.0 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_Crp_2 PF13545.6 CTQ30535.1 - 0.011 15.7 0.5 0.022 14.7 0.5 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.6 CTQ30535.1 - 0.012 15.2 1.5 0.073 12.6 0.1 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 CTQ30535.1 - 0.029 14.2 0.3 0.076 12.8 0.3 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain RPA_C PF08784.11 CTQ30535.1 - 0.048 14.3 0.0 0.15 12.7 0.0 1.8 2 0 0 2 2 2 0 Replication protein A C terminal HTH_29 PF13551.6 CTQ30535.1 - 0.085 12.9 1.0 1.4 9.0 0.2 2.6 2 1 1 3 3 3 0 Winged helix-turn helix PaaX PF07848.12 CTQ30535.1 - 0.091 13.0 0.3 0.2 11.9 0.3 1.5 1 0 0 1 1 1 0 PaaX-like protein HTH_36 PF13730.6 CTQ30535.1 - 0.1 12.5 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain FMN_dh PF01070.18 CTQ30536.1 - 3.3e-123 411.1 0.0 4e-123 410.9 0.0 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 CTQ30536.1 - 6.2e-06 25.4 3.0 4.7e-05 22.5 0.8 2.2 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 CTQ30536.1 - 8.4e-06 25.4 1.3 1.2e-05 24.8 1.3 1.1 1 0 0 1 1 1 1 Nitronate monooxygenase Glu_synthase PF01645.17 CTQ30536.1 - 0.00035 19.8 0.3 0.00052 19.3 0.3 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase ThiG PF05690.14 CTQ30536.1 - 0.0074 15.6 0.5 0.75 9.1 0.4 2.2 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG IGPS PF00218.21 CTQ30536.1 - 0.0079 15.4 0.0 0.014 14.6 0.0 1.4 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 CTQ30536.1 - 0.069 12.6 0.1 0.51 9.8 0.1 2.0 1 1 1 2 2 2 0 Histidine biosynthesis protein SpoU_methylase PF00588.19 CTQ30537.1 - 2.1e-33 115.5 0.0 2.4e-33 115.3 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family Malate_DH PF12434.8 CTQ30537.1 - 0.0046 17.0 0.1 0.0091 16.0 0.1 1.5 1 0 0 1 1 1 1 Malate dehydrogenase enzyme SATase_N PF06426.14 CTQ30538.1 - 1e-39 135.1 0.3 1.5e-39 134.6 0.3 1.3 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal Hexapep PF00132.24 CTQ30538.1 - 5.7e-12 44.9 5.4 6.6e-10 38.3 0.9 2.8 2 1 1 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 CTQ30538.1 - 0.00058 19.5 1.1 0.00058 19.5 1.1 2.3 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase Gly-zipper_OmpA PF13436.6 CTQ30538.1 - 6.8 6.6 8.2 1.1 9.1 3.6 2.1 2 1 0 2 2 2 0 Glycine-zipper domain NAD_Gly3P_dh_C PF07479.14 CTQ30539.1 - 6e-52 175.7 0.9 9.5e-52 175.1 0.9 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 CTQ30539.1 - 3.2e-49 166.9 0.0 4.9e-49 166.3 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 CTQ30539.1 - 7.3e-09 35.4 0.0 1.3e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 CTQ30539.1 - 3.6e-05 24.3 0.0 0.00049 20.6 0.0 2.5 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 CTQ30539.1 - 0.00033 20.9 0.0 0.0008 19.6 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 CTQ30539.1 - 0.00038 20.1 0.0 0.0018 17.9 0.0 2.1 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIDA PF01134.22 CTQ30539.1 - 0.00062 19.0 0.1 0.001 18.3 0.1 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A TrkA_N PF02254.18 CTQ30539.1 - 0.0019 18.4 0.0 0.026 14.8 0.0 2.6 3 0 0 3 3 3 1 TrkA-N domain NAD_binding_8 PF13450.6 CTQ30539.1 - 0.0034 17.6 0.1 0.011 15.9 0.1 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 CTQ30539.1 - 0.0043 16.9 0.1 0.0077 16.1 0.1 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rossmann-like PF10727.9 CTQ30539.1 - 0.0055 16.6 1.5 0.027 14.4 0.5 2.5 2 1 0 2 2 2 1 Rossmann-like domain Pyr_redox_2 PF07992.14 CTQ30539.1 - 0.016 14.5 0.1 0.032 13.5 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase IlvN PF07991.12 CTQ30539.1 - 0.1 12.2 0.1 1.4 8.5 0.1 2.2 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain SecB PF02556.14 CTQ30540.1 - 1.7e-57 193.3 0.1 2.1e-57 193.0 0.1 1.0 1 0 0 1 1 1 1 Preprotein translocase subunit SecB Glutaredoxin PF00462.24 CTQ30541.1 - 3.1e-23 81.8 0.0 3.6e-23 81.5 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 CTQ30541.1 - 2e-06 28.1 0.0 2.2e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ30541.1 - 0.00066 19.9 0.0 0.00078 19.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain SH3BGR PF04908.15 CTQ30541.1 - 0.004 17.3 0.0 0.006 16.7 0.0 1.3 1 1 0 1 1 1 1 SH3-binding, glutamic acid-rich protein DUF836 PF05768.14 CTQ30541.1 - 0.0064 16.9 0.0 0.0087 16.5 0.0 1.3 1 1 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Rhodanese PF00581.20 CTQ30542.1 - 3.7e-17 62.8 0.0 4.5e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain Metalloenzyme PF01676.18 CTQ30543.1 - 1.6e-86 289.7 0.3 1.9e-86 289.5 0.3 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily iPGM_N PF06415.13 CTQ30543.1 - 1e-81 273.5 1.0 1.8e-81 272.7 1.0 1.4 1 0 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Sulfatase PF00884.23 CTQ30543.1 - 0.012 15.1 0.0 0.019 14.3 0.0 1.4 1 0 0 1 1 1 0 Sulfatase PglZ PF08665.12 CTQ30543.1 - 0.018 15.2 0.0 0.04 14.0 0.0 1.5 1 0 0 1 1 1 0 PglZ domain PPR_long PF17177.4 CTQ30543.1 - 0.041 13.2 0.0 0.073 12.4 0.0 1.3 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Peptidase_M23 PF01551.22 CTQ30544.1 - 6.2e-27 93.7 0.2 1.7e-26 92.3 0.2 1.7 1 0 0 1 1 1 1 Peptidase family M23 DegQ PF08181.11 CTQ30544.1 - 0.03 14.4 2.2 0.034 14.3 0.1 2.0 2 0 0 2 2 2 0 DegQ (SacQ) family DUF16 PF01519.16 CTQ30544.1 - 0.077 13.5 22.6 0.12 12.9 6.4 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF16 FPP PF05911.11 CTQ30544.1 - 0.22 9.7 30.7 0.0076 14.5 5.8 2.0 2 0 0 2 2 2 0 Filament-like plant protein, long coiled-coil HemX PF04375.14 CTQ30544.1 - 0.28 10.4 40.5 0.19 11.0 14.4 2.3 2 0 0 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase AAA_13 PF13166.6 CTQ30544.1 - 0.54 8.8 28.1 0.049 12.3 7.8 2.1 2 0 0 2 2 2 0 AAA domain ATG16 PF08614.11 CTQ30544.1 - 1.1 9.5 48.1 0.087 13.0 14.5 2.4 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Cob_adeno_trans PF01923.18 CTQ30544.1 - 1.1 9.3 16.7 0.091 12.9 3.5 2.3 2 0 0 2 2 2 0 Cobalamin adenosyltransferase Spc7 PF08317.11 CTQ30544.1 - 1.1 8.0 43.7 2.2 7.1 16.1 2.6 2 1 0 2 2 2 0 Spc7 kinetochore protein DUF5082 PF16888.5 CTQ30544.1 - 2.2 8.6 32.1 0.88 9.9 4.4 3.4 2 1 0 3 3 3 0 Domain of unknown function (DUF5082) GAS PF13851.6 CTQ30544.1 - 5.3 6.3 42.5 1.4 8.2 13.4 2.8 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3793 PF12672.7 CTQ30544.1 - 7.5 6.6 7.4 4.6 7.3 3.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3793) Taxilin PF09728.9 CTQ30544.1 - 8.5 5.4 40.6 3.2 6.8 38.2 1.4 1 1 1 2 2 2 0 Myosin-like coiled-coil protein DUF1664 PF07889.12 CTQ30544.1 - 8.9 6.4 18.2 1.3 9.0 5.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Polysacc_deac_2 PF04748.13 CTQ30545.1 - 7.4e-77 257.3 0.3 8.8e-77 257.1 0.3 1.1 1 0 0 1 1 1 1 Divergent polysaccharide deacetylase Peptidase_S11 PF00768.20 CTQ30545.1 - 0.1 12.0 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase Glycos_transf_2 PF00535.26 CTQ30546.1 - 1.5e-15 57.4 0.0 2.2e-15 56.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 CTQ30546.1 - 8e-08 32.7 0.1 1.5e-07 31.9 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 CTQ30546.1 - 4.9e-05 23.3 0.0 6.5e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 CTQ30546.1 - 0.12 11.8 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 ADH_N PF08240.12 CTQ30547.1 - 4.9e-32 110.0 2.0 1.1e-31 108.9 2.0 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 CTQ30547.1 - 3.2e-27 95.1 0.1 5.3e-27 94.4 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 CTQ30547.1 - 5.6e-08 32.5 0.1 1.4e-07 31.2 0.1 1.6 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 CTQ30547.1 - 3.1e-06 28.3 0.0 6.4e-06 27.3 0.0 1.5 2 0 0 2 2 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 CTQ30547.1 - 0.00018 20.9 0.4 0.00027 20.3 0.4 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 CTQ30547.1 - 0.011 15.1 0.2 0.015 14.5 0.2 1.2 1 0 0 1 1 1 0 FAD binding domain HI0933_like PF03486.14 CTQ30547.1 - 0.019 13.7 0.3 0.026 13.3 0.3 1.1 1 0 0 1 1 1 0 HI0933-like protein Pyr_redox_2 PF07992.14 CTQ30547.1 - 0.029 13.6 0.0 0.04 13.2 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 CTQ30547.1 - 0.039 13.3 1.7 0.053 12.9 1.7 1.1 1 0 0 1 1 1 0 FAD dependent oxidoreductase MTS PF05175.14 CTQ30547.1 - 0.053 13.1 0.1 0.09 12.3 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase small domain FAD_binding_2 PF00890.24 CTQ30547.1 - 0.054 12.6 0.3 0.071 12.2 0.3 1.1 1 0 0 1 1 1 0 FAD binding domain Pyr_redox_3 PF13738.6 CTQ30547.1 - 0.077 12.2 0.1 0.12 11.6 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CTQ30547.1 - 0.11 13.1 0.4 0.26 11.8 0.4 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Methyltransf_25 PF13649.6 CTQ30547.1 - 0.12 13.1 0.0 0.23 12.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Aminotran_1_2 PF00155.21 CTQ30548.1 - 1.7e-78 264.4 0.0 1.9e-78 264.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 CTQ30548.1 - 8.8e-05 22.0 0.1 0.00031 20.2 0.1 1.9 2 1 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 CTQ30548.1 - 0.00015 20.8 0.0 0.00055 19.0 0.0 1.7 2 0 0 2 2 2 1 Aminotransferase class-V SHMT PF00464.19 CTQ30548.1 - 0.0013 17.4 0.0 0.0059 15.2 0.0 2.0 1 1 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 CTQ30548.1 - 0.008 15.5 0.3 0.021 14.1 0.2 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase HATPase_c_5 PF14501.6 CTQ30548.1 - 0.021 14.7 0.0 0.048 13.6 0.0 1.6 1 0 0 1 1 1 0 GHKL domain OKR_DC_1 PF01276.20 CTQ30548.1 - 0.12 11.0 0.0 0.25 10.0 0.0 1.5 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Cys_Met_Meta_PP PF01053.20 CTQ30548.1 - 0.16 10.5 0.0 0.25 9.8 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Epimerase PF01370.21 CTQ30549.1 - 4.1e-45 154.1 0.0 5.2e-45 153.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 CTQ30549.1 - 6.2e-22 78.4 0.0 9e-22 77.9 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 CTQ30549.1 - 3.6e-12 45.9 0.0 5.1e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 CTQ30549.1 - 2.7e-09 36.6 0.0 6.1e-09 35.4 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 CTQ30549.1 - 2.1e-05 23.8 0.0 0.008 15.4 0.0 2.4 2 0 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 CTQ30549.1 - 4.8e-05 22.6 0.1 0.059 12.5 0.1 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein KR PF08659.10 CTQ30549.1 - 0.068 13.1 0.2 0.23 11.3 0.2 1.9 1 1 0 1 1 1 0 KR domain adh_short PF00106.25 CTQ30549.1 - 0.14 11.6 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase ThiF PF00899.21 CTQ30549.1 - 0.23 10.8 0.2 2.8 7.2 0.4 2.0 2 0 0 2 2 2 0 ThiF family Glyco_transf_9 PF01075.17 CTQ30550.1 - 4e-86 288.4 0.0 4.9e-86 288.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) PS_pyruv_trans PF04230.13 CTQ30550.1 - 0.00031 20.8 0.0 0.057 13.3 0.0 2.3 2 0 0 2 2 2 2 Polysaccharide pyruvyl transferase Glyco_transf_9 PF01075.17 CTQ30551.1 - 8.6e-78 261.1 0.4 1.1e-77 260.7 0.4 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Thioredoxin_9 PF14595.6 CTQ30551.1 - 0.021 14.6 0.0 0.11 12.3 0.0 1.9 2 0 0 2 2 2 0 Thioredoxin Epimerase_2 PF02350.19 CTQ30551.1 - 0.12 11.2 0.0 0.17 10.7 0.0 1.2 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase MAF_flag10 PF01973.18 CTQ30552.1 - 0.001 18.8 0.0 0.0051 16.5 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function DUF115 Wzy_C PF04932.15 CTQ30553.1 - 1.3e-16 60.6 6.8 1.3e-16 60.6 6.8 3.8 3 1 1 4 4 4 2 O-Antigen ligase TctB PF07331.11 CTQ30553.1 - 0.01 16.1 5.2 0.01 16.1 5.2 3.4 2 1 0 3 3 3 0 Tripartite tricarboxylate transporter TctB family Flp_Fap PF04964.14 CTQ30553.1 - 0.084 12.7 0.2 0.29 11.0 0.2 2.0 1 0 0 1 1 1 0 Flp/Fap pilin component Glyco_transf_9 PF01075.17 CTQ30554.1 - 1.5e-13 50.7 0.0 4.3e-13 49.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase family 9 (heptosyltransferase) Polysacc_deac_1 PF01522.21 CTQ30555.1 - 0.12 12.3 0.0 0.42 10.5 0.0 1.9 2 0 0 2 2 2 0 Polysaccharide deacetylase Glyco_transf_9 PF01075.17 CTQ30556.1 - 3.2e-53 180.6 0.0 4e-53 180.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Glyco_transf_4 PF13439.6 CTQ30556.1 - 9.2e-05 22.5 0.8 0.0063 16.5 0.2 2.2 2 0 0 2 2 2 2 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 CTQ30557.1 - 7.4e-25 87.5 0.0 1.3e-24 86.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 CTQ30557.1 - 1.9e-21 76.9 0.0 9.7e-21 74.6 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 CTQ30557.1 - 2.1e-17 63.6 0.7 4.4e-17 62.6 0.7 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 CTQ30557.1 - 3.8e-06 27.4 1.1 1e-05 26.0 1.1 1.9 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 CTQ30557.1 - 0.012 16.0 0.0 0.025 14.9 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 CTQ30558.1 - 3.5e-20 72.2 0.0 6.2e-20 71.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 CTQ30558.1 - 1.4e-16 61.1 0.0 2.5e-16 60.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 CTQ30558.1 - 6.1e-15 55.6 0.2 3.2e-14 53.3 0.1 2.0 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 CTQ30558.1 - 1.9e-06 28.4 3.6 1.6e-05 25.4 1.9 2.3 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_tran_WecB PF03808.13 CTQ30558.1 - 0.04 13.9 0.0 0.43 10.5 0.0 2.2 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family Glycos_transf_2 PF00535.26 CTQ30559.1 - 5.1e-24 85.0 0.0 8e-24 84.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 CTQ30559.1 - 3.3e-07 30.1 0.0 4.9e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 CTQ30559.1 - 8.1e-07 29.2 0.0 3.6e-06 27.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 CTQ30559.1 - 4.5e-06 27.1 0.3 4e-05 24.0 0.0 2.3 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glycos_transf_N PF04413.16 CTQ30560.1 - 1.4e-68 230.1 0.0 6.7e-68 227.8 0.0 1.9 2 0 0 2 2 2 1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Glycos_transf_1 PF00534.20 CTQ30560.1 - 0.00012 21.6 0.0 0.00033 20.2 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_2 PF00535.26 CTQ30561.1 - 1.5e-20 73.7 0.1 2.1e-20 73.2 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 CTQ30561.1 - 1.3e-09 38.4 0.1 3.3e-09 37.1 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 CTQ30561.1 - 0.00033 20.6 0.0 0.00042 20.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 CTQ30561.1 - 0.00054 19.5 0.0 0.00083 18.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 HdeA PF06411.11 CTQ30561.1 - 0.0032 17.6 0.0 0.11 12.7 0.0 2.2 2 0 0 2 2 2 1 HdeA/HdeB family CTP_transf_like PF01467.26 CTQ30562.1 - 5.3e-22 78.6 0.0 6.2e-22 78.3 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like Citrate_ly_lig PF08218.11 CTQ30562.1 - 4.3e-06 26.5 0.1 8.7e-06 25.5 0.0 1.4 2 0 0 2 2 2 1 Citrate lyase ligase C-terminal domain H2TH PF06831.14 CTQ30563.1 - 5.8e-33 112.7 0.0 8.6e-33 112.2 0.0 1.3 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain Fapy_DNA_glyco PF01149.24 CTQ30563.1 - 1.1e-30 106.6 0.0 2e-30 105.8 0.0 1.4 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase N-terminal domain zf-FPG_IleRS PF06827.14 CTQ30563.1 - 5e-08 32.7 5.4 9.9e-08 31.7 5.4 1.5 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS Auto_anti-p27 PF06677.12 CTQ30563.1 - 0.033 14.4 1.9 0.064 13.4 1.9 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) FbpA PF05833.11 CTQ30563.1 - 0.05 12.4 0.0 0.064 12.0 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) Ribosomal_L33 PF00471.20 CTQ30564.1 - 1.3e-18 67.2 1.5 1.4e-18 67.0 1.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L33 Ribosomal_L28 PF00830.19 CTQ30565.1 - 1.8e-25 88.9 1.7 2.1e-25 88.7 1.7 1.1 1 0 0 1 1 1 1 Ribosomal L28 family RadC PF04002.15 CTQ30566.1 - 4.6e-45 152.5 0.0 9.3e-45 151.5 0.0 1.5 2 0 0 2 2 2 1 RadC-like JAB domain HHH_2 PF12826.7 CTQ30566.1 - 0.00074 19.6 0.1 0.0016 18.5 0.1 1.6 1 1 0 1 1 1 1 Helix-hairpin-helix motif Prok-JAB PF14464.6 CTQ30566.1 - 0.001 18.8 0.0 0.0016 18.2 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain DFP PF04127.15 CTQ30568.1 - 2e-73 246.2 3.3 4.3e-73 245.1 0.2 2.1 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 CTQ30568.1 - 1.7e-42 144.8 0.1 2.8e-42 144.2 0.1 1.3 1 0 0 1 1 1 1 Flavoprotein PALP PF00291.25 CTQ30568.1 - 0.45 9.9 4.7 0.23 10.9 1.2 2.2 2 2 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme Glyco_trans_4_4 PF13579.6 CTQ30568.1 - 3 8.3 7.8 3.7 8.0 2.6 2.6 1 1 2 3 3 3 0 Glycosyl transferase 4-like domain dUTPase PF00692.19 CTQ30569.1 - 1.6e-43 147.5 0.0 1.8e-43 147.3 0.0 1.0 1 0 0 1 1 1 1 dUTPase TetR_N PF00440.23 CTQ30570.1 - 3.2e-09 36.4 0.0 5.5e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_16 PF17920.1 CTQ30570.1 - 0.047 13.9 0.5 1.3 9.3 0.0 2.8 3 1 1 4 4 4 0 Tetracyclin repressor-like, C-terminal domain DUF390 PF04094.14 CTQ30570.1 - 0.074 11.3 0.2 0.071 11.4 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) TetR_C_15 PF17918.1 CTQ30570.1 - 0.093 13.5 0.4 1.5 9.6 0.0 2.5 1 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain MtrH PF02007.18 CTQ30570.1 - 0.24 10.4 0.0 0.33 10.0 0.0 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase MtrH subunit Pribosyltran PF00156.27 CTQ30571.1 - 4.6e-12 45.7 0.0 6.8e-12 45.2 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 CTQ30571.1 - 0.06 12.8 0.0 0.093 12.2 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase RNase_PH PF01138.21 CTQ30572.1 - 3e-24 86.0 0.0 5.3e-24 85.2 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 CTQ30572.1 - 5.3e-13 48.8 0.3 8.5e-13 48.1 0.3 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 BrnA_antitoxin PF14384.6 CTQ30572.1 - 0.089 13.3 0.1 23 5.6 0.0 2.4 2 0 0 2 2 2 0 BrnA antitoxin of type II toxin-antitoxin system ABC2_membrane_3 PF12698.7 CTQ30573.1 - 1.3e-41 142.9 17.5 1.5e-41 142.7 17.5 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 CTQ30573.1 - 4.9e-29 101.3 21.2 3.4e-28 98.5 17.9 2.1 2 0 0 2 2 2 2 ABC-2 type transporter ABC2_membrane_2 PF12679.7 CTQ30573.1 - 9.7e-22 77.6 9.6 1.3e-21 77.2 9.6 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 CTQ30573.1 - 7.4e-09 35.8 10.9 1.6e-07 31.5 8.8 2.3 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 CTQ30574.1 - 3.7e-33 114.9 0.0 7.8e-33 113.9 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 CTQ30574.1 - 2.8e-10 40.5 0.2 4.1e-07 30.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30574.1 - 4.9e-05 22.9 0.0 0.00039 19.9 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CTQ30574.1 - 0.00068 20.2 0.0 0.001 19.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 CTQ30574.1 - 0.0026 17.6 0.0 0.9 9.2 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain SbcCD_C PF13558.6 CTQ30574.1 - 0.038 14.2 0.0 0.47 10.7 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 CTQ30574.1 - 0.054 13.2 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 CTQ30574.1 - 0.058 13.8 0.0 0.35 11.3 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CTQ30574.1 - 0.074 13.4 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 CTQ30574.1 - 0.15 12.3 0.4 2.2 8.6 0.4 2.4 1 1 0 1 1 1 0 AAA domain HlyD_3 PF13437.6 CTQ30575.1 - 7.7e-17 61.9 0.0 2.3e-14 53.9 0.0 2.9 2 1 1 3 3 3 1 HlyD family secretion protein HlyD_D23 PF16576.5 CTQ30575.1 - 5.6e-08 32.3 0.3 6e-06 25.6 0.3 2.3 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl PF00364.22 CTQ30575.1 - 0.0023 17.7 0.0 0.14 12.0 0.0 2.5 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 CTQ30575.1 - 0.0072 16.1 0.9 0.029 14.2 0.0 2.4 3 0 0 3 3 3 1 Biotin-lipoyl like HBM PF16591.5 CTQ30575.1 - 0.0078 15.7 3.0 0.011 15.2 3.0 1.2 1 0 0 1 1 1 1 Helical bimodular sensor domain LPAM_1 PF08139.12 CTQ30575.1 - 0.054 14.0 0.1 0.12 13.0 0.1 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site APG6_N PF17675.1 CTQ30575.1 - 1.2 9.7 7.8 0.52 10.9 5.1 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region Acetyltransf_5 PF13444.6 CTQ30576.1 - 5.9e-18 65.5 0.0 9.7e-18 64.7 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acyltransferase PF01553.21 CTQ30576.1 - 7.8e-07 28.8 0.4 1.9e-06 27.5 0.3 1.8 2 0 0 2 2 2 1 Acyltransferase YicC_N PF03755.13 CTQ30577.1 - 6.2e-44 150.1 0.0 6.2e-44 150.1 0.0 2.1 2 1 0 2 2 2 1 YicC-like family, N-terminal region DUF1732 PF08340.11 CTQ30577.1 - 2.8e-34 116.9 7.3 2.8e-34 116.9 7.3 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1732) Cnn_1N PF07989.11 CTQ30577.1 - 2 8.6 10.3 1.2 9.3 1.0 2.7 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 PEP_mutase PF13714.6 CTQ30578.1 - 2.8e-70 236.5 0.1 3.1e-70 236.3 0.1 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase Pantoate_transf PF02548.15 CTQ30578.1 - 7.2e-05 22.3 0.0 0.0001 21.8 0.0 1.2 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase DNA_binding_1 PF01035.20 CTQ30579.1 - 1.7e-27 95.4 0.2 4e-27 94.2 0.2 1.7 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Ada_Zn_binding PF02805.16 CTQ30579.1 - 1.2e-26 92.4 1.6 3.5e-26 91.0 1.6 1.8 1 0 0 1 1 1 1 Metal binding domain of Ada HTH_18 PF12833.7 CTQ30579.1 - 2.7e-14 53.2 0.3 9.5e-14 51.4 0.3 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain Methyltransf_1N PF02870.15 CTQ30579.1 - 2.3e-08 34.7 0.0 1.1e-07 32.6 0.0 2.1 2 0 0 2 2 2 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HTH_Tnp_ISL3 PF13542.6 CTQ30579.1 - 1.6 8.2 4.8 2.6 7.6 0.2 3.4 3 1 0 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 Voltage_CLC PF00654.20 CTQ30580.1 - 5.6e-64 216.6 43.8 7.5e-64 216.2 34.3 2.5 1 1 2 3 3 3 3 Voltage gated chloride channel UPF0126 PF03458.13 CTQ30581.1 - 8.6e-42 140.9 23.0 1.3e-21 76.2 5.2 2.5 3 0 0 3 3 3 2 UPF0126 domain ThrE PF06738.12 CTQ30581.1 - 0.54 9.6 11.7 0.17 11.2 4.5 2.4 1 1 0 2 2 2 0 Putative threonine/serine exporter DNA_ligase_aden PF01653.18 CTQ30582.1 - 1.6e-22 80.0 0.0 3.8e-21 75.5 0.0 2.1 1 1 0 1 1 1 1 NAD-dependent DNA ligase adenylation domain DNA_ligase_OB PF03120.16 CTQ30582.1 - 6.2e-15 54.9 0.5 1.1e-14 54.1 0.5 1.4 1 0 0 1 1 1 1 NAD-dependent DNA ligase OB-fold domain HHH PF00633.23 CTQ30582.1 - 4.9e-06 26.1 0.1 0.046 13.6 0.0 2.9 3 0 0 3 3 3 2 Helix-hairpin-helix motif HHH_5 PF14520.6 CTQ30582.1 - 0.0031 18.1 0.0 17 6.1 0.0 3.6 3 0 0 3 3 3 2 Helix-hairpin-helix domain DUF3701 PF12482.8 CTQ30582.1 - 0.02 14.9 0.1 0.02 14.9 0.1 3.5 3 0 0 3 3 3 0 Phage integrase protein RNA_ligase PF09414.10 CTQ30582.1 - 0.038 14.3 0.0 0.066 13.5 0.0 1.4 1 0 0 1 1 1 0 RNA ligase Guanylate_kin PF00625.21 CTQ30583.1 - 5.5e-70 234.7 0.0 6.4e-70 234.5 0.0 1.0 1 0 0 1 1 1 1 Guanylate kinase AAA_16 PF13191.6 CTQ30583.1 - 0.0011 19.4 0.5 0.008 16.6 0.5 2.0 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ30583.1 - 0.0017 18.3 0.1 0.0063 16.4 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_33 PF13671.6 CTQ30583.1 - 0.0023 18.1 0.0 0.011 15.9 0.0 2.2 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 CTQ30583.1 - 0.0033 17.5 0.0 0.01 15.9 0.0 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 CTQ30583.1 - 0.0035 17.6 0.0 0.03 14.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 CTQ30583.1 - 0.0069 16.9 0.0 0.0074 16.8 0.0 1.4 1 1 0 1 1 1 1 ABC transporter AAA_18 PF13238.6 CTQ30583.1 - 0.048 14.2 0.0 0.22 12.1 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 CTQ30583.1 - 0.084 13.3 0.0 0.32 11.4 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Viral_helicase1 PF01443.18 CTQ30583.1 - 0.089 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase CPT PF07931.12 CTQ30583.1 - 0.12 12.2 0.1 0.29 10.9 0.1 1.7 1 1 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein Rad17 PF03215.15 CTQ30583.1 - 0.18 11.7 0.0 0.41 10.5 0.0 1.6 1 1 0 1 1 1 0 Rad17 P-loop domain RNA_pol_Rpb6 PF01192.22 CTQ30584.1 - 1.2e-15 57.1 0.1 2e-15 56.4 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb6 HD_4 PF13328.6 CTQ30585.1 - 2.7e-53 179.9 0.8 5e-53 179.0 0.8 1.4 1 0 0 1 1 1 1 HD domain RelA_SpoT PF04607.17 CTQ30585.1 - 1.3e-35 122.2 0.3 4.1e-35 120.6 0.0 2.0 2 0 0 2 2 2 1 Region found in RelA / SpoT proteins TGS PF02824.21 CTQ30585.1 - 8.9e-22 76.9 0.0 2.4e-21 75.6 0.0 1.8 1 0 0 1 1 1 1 TGS domain ACT_4 PF13291.6 CTQ30585.1 - 4.4e-15 56.0 1.9 1.5e-14 54.3 1.1 2.3 2 0 0 2 2 2 1 ACT domain HD PF01966.22 CTQ30585.1 - 5.4e-13 49.2 2.3 1.5e-12 47.8 0.4 2.5 2 1 1 3 3 3 1 HD domain TFIIS_M PF07500.14 CTQ30585.1 - 0.016 15.7 0.1 0.016 15.7 0.1 2.5 3 1 0 3 3 3 0 Transcription factor S-II (TFIIS), central domain DUF2007 PF09413.10 CTQ30585.1 - 0.07 13.3 0.0 0.59 10.3 0.0 2.5 2 1 0 2 2 2 0 Putative prokaryotic signal transducing protein EMC3_TMCO1 PF01956.16 CTQ30585.1 - 0.13 12.0 0.4 0.28 10.9 0.4 1.5 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like SpoU_methylase PF00588.19 CTQ30586.1 - 1e-36 126.2 0.1 1.4e-36 125.8 0.1 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_methylas_C PF12105.8 CTQ30586.1 - 2.6e-24 84.6 2.0 4.3e-24 83.9 2.0 1.4 1 0 0 1 1 1 1 SpoU, rRNA methylase, C-terminal RuvC PF02075.17 CTQ30586.1 - 0.059 13.2 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 Crossover junction endodeoxyribonuclease RuvC SLATT_1 PF18181.1 CTQ30586.1 - 0.065 13.2 2.6 1.1 9.2 0.5 2.3 1 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 RecG_wedge PF17191.4 CTQ30587.1 - 8.3e-23 80.8 0.0 1.2e-22 80.2 0.0 1.3 1 0 0 1 1 1 1 RecG wedge domain DEAD PF00270.29 CTQ30587.1 - 6.2e-20 71.7 0.3 2.6e-19 69.7 0.1 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CTQ30587.1 - 1.5e-19 70.4 0.0 9.8e-17 61.3 0.0 2.4 2 0 0 2 2 2 2 Helicase conserved C-terminal domain ResIII PF04851.15 CTQ30587.1 - 1.7e-11 44.4 0.0 2.7e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit tRNA_anti-codon PF01336.25 CTQ30587.1 - 2.8e-08 33.6 0.0 5.9e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain SecA_DEAD PF07517.14 CTQ30587.1 - 4.9e-07 29.3 0.0 9.7e-07 28.4 0.0 1.5 1 0 0 1 1 1 1 SecA DEAD-like domain AAA_30 PF13604.6 CTQ30587.1 - 5.6e-05 22.9 1.0 0.00021 21.1 1.0 1.8 1 1 0 1 1 1 1 AAA domain SNF2_N PF00176.23 CTQ30587.1 - 0.0016 17.2 0.0 0.0022 16.8 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF2075 PF09848.9 CTQ30587.1 - 0.006 15.9 0.1 0.0087 15.3 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) Helicase_RecD PF05127.14 CTQ30587.1 - 0.023 14.5 0.1 0.054 13.3 0.1 1.6 1 0 0 1 1 1 0 Helicase RC-P840_PscD PF10657.9 CTQ30587.1 - 0.068 13.3 0.0 0.98 9.5 0.0 2.2 2 0 0 2 2 2 0 Photosystem P840 reaction centre protein PscD AAA_22 PF13401.6 CTQ30587.1 - 0.14 12.4 0.7 5.2 7.3 0.2 3.3 1 1 0 2 2 2 0 AAA domain FBPase_glpX PF03320.13 CTQ30588.1 - 1.1e-133 444.9 7.5 1.2e-133 444.7 7.5 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DUF4265 PF14085.6 CTQ30588.1 - 0.043 13.8 0.0 11 6.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4265) NAD_binding_1 PF00175.21 CTQ30589.1 - 2.1e-18 66.9 0.0 2.9e-18 66.5 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 CTQ30589.1 - 7e-06 26.3 0.0 1.6e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 CTQ30589.1 - 0.015 15.4 0.0 0.37 10.9 0.0 2.1 1 1 0 2 2 2 0 Ferric reductase NAD binding domain DUF805 PF05656.14 CTQ30590.1 - 2.1e-20 73.1 5.5 2.7e-20 72.7 5.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF805) CTP_transf_1 PF01148.20 CTQ30590.1 - 0.012 15.4 4.3 0.014 15.2 4.3 1.0 1 0 0 1 1 1 0 Cytidylyltransferase family Trep_Strep PF09605.10 CTQ30590.1 - 0.24 11.3 8.7 0.05 13.6 4.7 1.7 1 1 1 2 2 2 0 Hypothetical bacterial integral membrane protein (Trep_Strep) DUF1454 PF07305.12 CTQ30591.1 - 2.2e-81 271.9 0.1 2.6e-81 271.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1454) HBM PF16591.5 CTQ30591.1 - 0.016 14.7 0.1 0.026 13.9 0.1 1.4 1 1 0 1 1 1 0 Helical bimodular sensor domain TIM PF00121.18 CTQ30592.1 - 3.6e-94 314.7 0.3 4.1e-94 314.5 0.3 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase DUF3254 PF11630.8 CTQ30592.1 - 0.089 13.0 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3254) Na_sulph_symp PF00939.19 CTQ30593.1 - 1.4e-22 80.4 24.4 1.9e-22 80.0 24.4 1.1 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 CTQ30593.1 - 6.4e-16 58.4 29.5 1.1e-15 57.6 29.5 1.3 1 0 0 1 1 1 1 Citrate transporter CDH PF02611.15 CTQ30594.1 - 8.1e-92 306.9 0.0 9.3e-92 306.7 0.0 1.0 1 0 0 1 1 1 1 CDP-diacylglycerol pyrophosphatase SBP_bac_11 PF13531.6 CTQ30595.1 - 3.7e-47 161.0 0.1 4.4e-47 160.8 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ30595.1 - 6.5e-19 69.0 2.6 8.1e-19 68.7 2.6 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ30595.1 - 7.5e-12 45.2 0.9 2.1e-11 43.7 0.5 1.6 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 CTQ30595.1 - 2.8e-08 33.9 0.7 4.5e-08 33.3 0.7 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 CTQ30595.1 - 0.00027 20.1 0.0 0.00044 19.4 0.0 1.5 1 1 0 1 1 1 1 PBP superfamily domain ZapB PF06005.12 CTQ30596.1 - 7e-26 90.5 16.9 1e-25 90.0 16.9 1.2 1 0 0 1 1 1 1 Cell division protein ZapB DHR10 PF18595.1 CTQ30596.1 - 0.00012 22.2 13.4 0.00015 21.8 13.4 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain PspA_IM30 PF04012.12 CTQ30596.1 - 0.00078 19.1 7.4 0.00086 18.9 7.4 1.0 1 0 0 1 1 1 1 PspA/IM30 family UPF0242 PF06785.11 CTQ30596.1 - 0.0015 18.7 10.8 0.0018 18.4 10.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF3450 PF11932.8 CTQ30596.1 - 0.0015 17.8 10.6 0.0018 17.7 10.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) CtIP_N PF10482.9 CTQ30596.1 - 0.0024 17.9 11.3 0.016 15.3 3.5 2.0 2 0 0 2 2 2 2 Tumour-suppressor protein CtIP N-terminal domain Leu_zip PF15294.6 CTQ30596.1 - 0.0027 17.3 6.2 0.0033 17.0 6.2 1.2 1 0 0 1 1 1 1 Leucine zipper YabA PF06156.13 CTQ30596.1 - 0.0033 18.0 7.8 0.0043 17.7 7.8 1.2 1 0 0 1 1 1 1 Initiation control protein YabA HemX PF04375.14 CTQ30596.1 - 0.0061 15.9 8.8 0.0064 15.8 8.8 1.0 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase Herpes_UL6 PF01763.16 CTQ30596.1 - 0.0085 14.7 4.7 0.0092 14.6 4.7 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like Uso1_p115_C PF04871.13 CTQ30596.1 - 0.012 16.0 9.4 0.013 15.9 9.4 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region CENP-F_leu_zip PF10473.9 CTQ30596.1 - 0.012 15.6 10.4 0.014 15.4 10.4 1.2 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cep57_CLD_2 PF14197.6 CTQ30596.1 - 0.012 15.6 7.4 0.017 15.2 6.6 1.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 KASH_CCD PF14662.6 CTQ30596.1 - 0.013 15.3 12.5 0.013 15.3 12.5 1.0 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH betaPIX_CC PF16523.5 CTQ30596.1 - 0.014 15.2 4.1 0.018 14.9 4.1 1.2 1 0 0 1 1 1 0 betaPIX coiled coil ADIP PF11559.8 CTQ30596.1 - 0.018 15.2 9.2 0.02 15.0 9.2 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding CENP-H PF05837.12 CTQ30596.1 - 0.021 15.2 8.3 0.025 15.0 8.3 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF4763 PF15960.5 CTQ30596.1 - 0.024 13.9 8.2 0.027 13.8 8.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) DUF4201 PF13870.6 CTQ30596.1 - 0.027 14.2 8.3 0.028 14.2 8.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) APG6_N PF17675.1 CTQ30596.1 - 0.028 14.9 12.8 0.033 14.7 12.8 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region TMF_TATA_bd PF12325.8 CTQ30596.1 - 0.031 14.5 11.5 0.034 14.4 11.5 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DUF2353 PF09789.9 CTQ30596.1 - 0.031 13.6 8.4 0.036 13.4 8.4 1.0 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) GIT_CC PF16559.5 CTQ30596.1 - 0.034 14.0 8.4 0.043 13.7 6.4 2.0 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Seryl_tRNA_N PF02403.22 CTQ30596.1 - 0.039 14.2 7.1 0.048 13.9 7.1 1.2 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain dCache_2 PF08269.11 CTQ30596.1 - 0.041 13.0 4.0 0.047 12.9 4.0 1.0 1 0 0 1 1 1 0 Cache domain bZIP_2 PF07716.15 CTQ30596.1 - 0.049 13.7 15.2 0.2 11.8 2.6 2.8 1 1 2 3 3 3 0 Basic region leucine zipper RasGEF_N_2 PF14663.6 CTQ30596.1 - 0.069 13.5 2.9 0.079 13.4 2.9 1.0 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain FlaC_arch PF05377.11 CTQ30596.1 - 0.092 13.2 9.0 0.96 9.9 4.7 2.1 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF4757 PF15949.5 CTQ30596.1 - 0.1 13.1 7.2 0.13 12.7 7.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4757) Cnn_1N PF07989.11 CTQ30596.1 - 0.11 12.6 9.0 0.15 12.2 8.2 1.6 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Jnk-SapK_ap_N PF09744.9 CTQ30596.1 - 0.12 12.6 12.4 0.15 12.3 12.4 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 COG6 PF06419.11 CTQ30596.1 - 0.13 10.4 5.6 0.15 10.3 5.6 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 HAUS6_N PF14661.6 CTQ30596.1 - 0.15 11.6 4.6 0.17 11.4 4.6 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF1664 PF07889.12 CTQ30596.1 - 0.16 12.0 4.3 0.21 11.7 4.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Atg14 PF10186.9 CTQ30596.1 - 0.18 10.8 5.8 0.21 10.6 5.8 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TPR_MLP1_2 PF07926.12 CTQ30596.1 - 0.19 11.8 13.8 0.73 9.9 13.8 1.8 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein bZIP_1 PF00170.21 CTQ30596.1 - 0.21 11.7 10.3 3.7 7.7 0.6 2.4 1 1 1 2 2 2 0 bZIP transcription factor JIP_LZII PF16471.5 CTQ30596.1 - 0.23 11.7 9.9 1.6 8.9 8.5 2.3 1 1 2 3 3 2 0 JNK-interacting protein leucine zipper II CLZ PF16526.5 CTQ30596.1 - 0.33 11.3 9.6 0.31 11.4 2.2 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF2203 PF09969.9 CTQ30596.1 - 0.35 11.6 5.5 0.4 11.4 5.5 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) UPF0225 PF17775.1 CTQ30596.1 - 0.39 11.6 2.5 0.5 11.2 2.5 1.1 1 0 0 1 1 1 0 UPF0225 domain DUF4140 PF13600.6 CTQ30596.1 - 0.43 11.1 6.1 0.74 10.3 5.6 1.5 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF2205 PF10224.9 CTQ30596.1 - 0.64 10.1 10.5 0.69 10.0 1.4 2.1 1 1 1 2 2 2 0 Short coiled-coil protein Tox-ODYAM1 PF15642.6 CTQ30596.1 - 0.68 8.8 5.9 0.69 8.8 5.9 1.0 1 0 0 1 1 1 0 Toxin in Odyssella and Amoebophilus CCDC-167 PF15188.6 CTQ30596.1 - 0.7 10.3 8.1 1.2 9.6 8.1 1.5 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 TSC22 PF01166.18 CTQ30596.1 - 0.78 10.1 9.9 3.8 7.9 2.5 2.5 1 1 1 2 2 2 0 TSC-22/dip/bun family DivIC PF04977.15 CTQ30596.1 - 0.85 9.4 11.9 0.17 11.7 5.0 2.1 1 1 1 2 2 2 0 Septum formation initiator Tho2 PF11262.8 CTQ30596.1 - 0.89 8.7 5.2 1 8.5 5.2 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 TMPIT PF07851.13 CTQ30596.1 - 1.3 8.2 5.3 1.3 8.1 5.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein CC2-LZ PF16516.5 CTQ30596.1 - 2 8.8 12.3 2.2 8.7 2.4 2.1 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Spc24 PF08286.11 CTQ30596.1 - 2.3 8.5 11.0 38 4.6 11.0 2.0 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 KxDL PF10241.9 CTQ30596.1 - 2.8 8.3 8.9 1.8 8.9 1.4 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein HALZ PF02183.18 CTQ30596.1 - 3.7 7.8 12.5 1.6 9.0 1.0 2.8 3 0 0 3 3 3 0 Homeobox associated leucine zipper SlyX PF04102.12 CTQ30596.1 - 5 7.8 12.9 2 9.1 5.8 2.4 1 1 1 2 2 2 0 SlyX OmpH PF03938.14 CTQ30596.1 - 5.6 7.3 13.2 10 6.4 13.2 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) MIP PF00230.20 CTQ30597.1 - 5.9e-72 242.1 12.3 6.8e-72 241.9 12.3 1.0 1 0 0 1 1 1 1 Major intrinsic protein FGGY_N PF00370.21 CTQ30598.1 - 4.8e-93 311.2 0.2 6.5e-93 310.8 0.2 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 CTQ30598.1 - 6.6e-63 212.0 0.4 4.8e-62 209.2 0.5 2.0 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain Glt_symporter PF03616.14 CTQ30599.1 - 1.9e-159 530.2 22.5 2.4e-159 529.9 22.5 1.1 1 0 0 1 1 1 1 Sodium/glutamate symporter TraQ PF09679.10 CTQ30599.1 - 1.2 9.1 7.6 0.12 12.3 0.4 2.9 2 1 1 3 3 3 0 Type-F conjugative transfer system pilin chaperone (TraQ) Xan_ur_permease PF00860.20 CTQ30600.1 - 4.3e-108 361.5 39.6 5.8e-108 361.1 39.6 1.2 1 0 0 1 1 1 1 Permease family SprB PF13573.6 CTQ30600.1 - 0.037 13.8 0.3 0.075 12.8 0.3 1.5 1 0 0 1 1 1 0 SprB repeat DUF3925 PF13063.6 CTQ30600.1 - 0.73 10.1 4.9 1.3 9.3 0.9 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3925) YtpI PF14007.6 CTQ30600.1 - 1.4 9.1 6.9 0.93 9.7 0.7 3.0 2 0 0 2 2 2 0 YtpI-like protein AsmA PF05170.14 CTQ30601.1 - 5.8e-22 78.2 4.6 1.2e-16 60.6 0.3 3.0 2 1 1 3 3 3 3 AsmA family DUF2125 PF09898.9 CTQ30601.1 - 7e-05 22.6 7.6 0.0055 16.4 0.7 3.3 3 0 0 3 3 3 2 Uncharacterized protein conserved in bacteria (DUF2125) AsmA_2 PF13502.6 CTQ30601.1 - 9.9e-05 22.0 10.8 0.001 18.7 0.2 4.8 3 1 0 5 5 5 1 AsmA-like C-terminal region DUF4097 PF13349.6 CTQ30601.1 - 0.0045 16.4 0.0 0.26 10.6 0.0 2.6 1 1 0 1 1 1 1 Putative adhesin PTS_EIIC PF02378.18 CTQ30602.1 - 6.8e-58 196.2 29.8 8.4e-58 195.9 29.8 1.1 1 0 0 1 1 1 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ30602.1 - 5.2e-13 48.2 0.9 9.8e-13 47.4 0.9 1.5 1 0 0 1 1 1 1 phosphotransferase system, EIIB YbjM PF11045.8 CTQ30602.1 - 0.013 15.7 3.7 0.014 15.6 0.3 2.8 3 0 0 3 3 3 0 Putative inner membrane protein of Enterobacteriaceae DUF3681 PF12442.8 CTQ30602.1 - 0.15 12.6 0.0 0.15 12.6 0.0 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF3681) Glyco_hydro_4C PF11975.8 CTQ30603.1 - 1.3e-38 133.2 0.1 1.8e-38 132.7 0.1 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain Glyco_hydro_4 PF02056.16 CTQ30603.1 - 1.5e-27 96.4 0.0 2.2e-27 95.8 0.0 1.3 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase FCD PF07729.12 CTQ30603.1 - 0.06 13.8 0.6 6.4 7.2 0.1 2.5 2 0 0 2 2 2 0 FCD domain HTH_6 PF01418.17 CTQ30604.1 - 2e-11 43.7 0.1 1.7e-10 40.7 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 CTQ30604.1 - 1.9e-07 31.0 0.0 4.3e-07 29.8 0.0 1.5 1 1 0 1 1 1 1 SIS domain SIS_2 PF13580.6 CTQ30604.1 - 0.0019 18.2 0.0 0.5 10.4 0.0 2.2 1 1 0 2 2 2 2 SIS domain MarR_2 PF12802.7 CTQ30604.1 - 0.028 14.3 0.0 0.056 13.3 0.0 1.5 1 0 0 1 1 1 0 MarR family MarR PF01047.22 CTQ30604.1 - 0.16 11.9 0.0 1.4 8.9 0.0 2.2 2 0 0 2 2 2 0 MarR family Glyco_hydro_31 PF01055.26 CTQ30605.1 - 6.8e-122 407.8 3.0 9.2e-122 407.4 3.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 CTQ30605.1 - 4.6e-17 62.1 0.3 3.6e-16 59.2 0.1 2.5 2 0 0 2 2 2 1 Galactose mutarotase-like MFS_2 PF13347.6 CTQ30606.1 - 7.3e-105 351.0 36.0 8.6e-105 350.7 36.0 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF3237 PF11578.8 CTQ30607.1 - 8.8e-34 116.5 0.0 9.9e-34 116.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3237) ADH_zinc_N_2 PF13602.6 CTQ30608.1 - 4e-21 76.5 0.2 6.5e-21 75.8 0.2 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 CTQ30608.1 - 4.7e-11 42.8 0.0 1.4e-10 41.3 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 CTQ30608.1 - 2.7e-06 27.2 0.0 5.4e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Epimerase PF01370.21 CTQ30608.1 - 0.0048 16.4 0.1 0.0075 15.8 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family TrkA_N PF02254.18 CTQ30608.1 - 0.056 13.7 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain DapB_N PF01113.20 CTQ30608.1 - 0.09 12.9 0.1 0.24 11.5 0.0 1.7 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus ABM PF03992.16 CTQ30609.1 - 9.6e-18 64.1 0.0 1.1e-17 63.9 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase CDH PF02611.15 CTQ30609.1 - 0.081 12.5 0.0 0.096 12.3 0.0 1.1 1 0 0 1 1 1 0 CDP-diacylglycerol pyrophosphatase HTH_46 PF15977.5 CTQ30610.1 - 7e-29 99.6 0.3 1.1e-28 99.1 0.3 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA binding Rrf2 PF02082.20 CTQ30610.1 - 0.0035 17.7 0.0 0.0072 16.6 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 CTQ30610.1 - 0.008 16.0 0.1 0.014 15.2 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_36 PF13730.6 CTQ30610.1 - 0.022 14.7 0.0 0.046 13.7 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 CTQ30610.1 - 0.029 13.9 0.3 0.053 13.1 0.3 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TrmB PF01978.19 CTQ30610.1 - 0.13 12.1 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB ADH_N PF08240.12 CTQ30611.1 - 2e-26 92.0 4.9 4e-26 91.0 4.9 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 CTQ30611.1 - 1.4e-23 83.3 0.0 2.8e-23 82.3 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 CTQ30611.1 - 7.2e-07 28.7 0.2 1.4e-06 27.8 0.2 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ADH_zinc_N_2 PF13602.6 CTQ30611.1 - 4.4e-05 24.5 0.0 8.4e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 CTQ30611.1 - 4.8e-05 22.8 0.0 7.7e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 CTQ30611.1 - 0.0029 17.8 0.5 0.006 16.8 0.5 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Oxidored_nitro PF00148.19 CTQ30611.1 - 0.0061 15.3 0.0 0.0086 14.8 0.0 1.1 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase HTH_18 PF12833.7 CTQ30612.1 - 2.1e-20 72.8 1.0 3.9e-20 71.9 1.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ30612.1 - 2.6e-16 59.3 0.0 8.3e-07 29.0 0.0 2.7 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family DJ-1_PfpI PF01965.24 CTQ30612.1 - 2.1e-08 34.1 0.0 2.9e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family Spem1 PF15670.5 CTQ30612.1 - 0.082 12.5 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 Lactamase_B_2 PF12706.7 CTQ30613.1 - 6.1e-11 42.2 0.7 8.3e-11 41.8 0.7 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 CTQ30613.1 - 2e-10 40.8 0.0 3e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 CTQ30613.1 - 2.2e-06 27.8 0.5 3.8e-06 27.1 0.5 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily NUDIX PF00293.28 CTQ30615.1 - 1.1e-18 67.6 0.2 1.8e-18 66.8 0.2 1.4 1 0 0 1 1 1 1 NUDIX domain DUF4130 PF13566.6 CTQ30615.1 - 0.024 14.7 0.0 0.037 14.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4130 PIN_10 PF18478.1 CTQ30615.1 - 0.096 12.9 0.1 0.17 12.1 0.1 1.3 1 0 0 1 1 1 0 PIN like domain EF-1_beta_acid PF10587.9 CTQ30615.1 - 0.96 10.0 3.7 2.5 8.6 3.7 1.7 1 0 0 1 1 1 0 Eukaryotic elongation factor 1 beta central acidic region EamA PF00892.20 CTQ30616.1 - 5.6e-28 97.8 31.0 3.5e-15 56.4 10.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family DAD PF02109.16 CTQ30616.1 - 0.0085 16.4 0.0 0.045 14.1 0.0 2.2 2 1 1 3 3 3 1 DAD family Nucleos_tra2_N PF01773.20 CTQ30616.1 - 0.3 11.7 5.6 0.68 10.6 3.8 2.7 1 1 1 2 2 2 0 Na+ dependent nucleoside transporter N-terminus Lipoprotein_9 PF03180.14 CTQ30617.1 - 1.3e-93 312.5 0.1 1.4e-93 312.3 0.1 1.0 1 0 0 1 1 1 1 NLPA lipoprotein OpuAC PF04069.12 CTQ30617.1 - 0.0033 17.1 0.1 0.0051 16.4 0.1 1.6 1 1 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Cupin_6 PF12852.7 CTQ30618.1 - 9e-30 103.8 5.9 9e-30 103.8 5.9 1.7 2 1 0 2 2 2 1 Cupin HTH_18 PF12833.7 CTQ30618.1 - 9.9e-21 73.8 4.1 1.6e-20 73.1 4.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ30618.1 - 4.6e-16 58.4 0.1 3.1e-08 33.5 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 CTQ30618.1 - 2.5e-09 37.1 1.1 2.5e-09 37.1 1.1 1.9 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_2 PF07883.11 CTQ30618.1 - 1.7e-07 30.9 0.2 3.7e-07 29.8 0.2 1.5 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 CTQ30618.1 - 3.9e-06 26.5 0.2 8.5e-06 25.4 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF861) CMD PF02627.20 CTQ30619.1 - 6.2e-15 55.0 1.8 3.1e-12 46.4 0.8 2.3 1 1 0 2 2 2 2 Carboxymuconolactone decarboxylase family CPSase_L_D3 PF02787.19 CTQ30619.1 - 0.00031 21.1 0.1 0.11 12.9 0.0 2.2 1 1 1 2 2 2 2 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HTH_26 PF13443.6 CTQ30619.1 - 0.013 15.9 0.0 0.093 13.2 0.0 2.2 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain mTERF PF02536.14 CTQ30619.1 - 0.095 11.6 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 mTERF Acetyltransf_11 PF13720.6 CTQ30619.1 - 0.12 12.8 0.1 15 6.1 0.0 2.8 2 1 0 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF1348 PF07080.11 CTQ30620.1 - 8.8e-66 219.7 6.7 1e-65 219.5 6.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1348) SnoaL_2 PF12680.7 CTQ30620.1 - 0.00016 22.3 0.9 0.0002 21.9 0.9 1.2 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 CTQ30620.1 - 0.022 15.1 0.1 0.031 14.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) DUF3757 PF12582.8 CTQ30620.1 - 0.16 12.4 2.2 0.21 12.0 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3757) Putative_PNPOx PF01243.20 CTQ30621.1 - 0.0014 18.7 0.0 0.0022 18.1 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase bZIP_2 PF07716.15 CTQ30621.1 - 0.0051 16.9 5.7 0.01 15.9 5.7 1.5 1 0 0 1 1 1 1 Basic region leucine zipper DUF1192 PF06698.11 CTQ30621.1 - 0.017 15.2 0.5 0.036 14.1 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) ABC_tran_CTD PF16326.5 CTQ30621.1 - 0.042 14.1 0.5 0.072 13.3 0.5 1.4 1 0 0 1 1 1 0 ABC transporter C-terminal domain DUF465 PF04325.13 CTQ30621.1 - 0.075 13.1 1.3 0.16 12.0 1.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF465) RBD-FIP PF09457.10 CTQ30621.1 - 0.77 9.7 4.1 8.1 6.4 3.1 2.3 2 0 0 2 2 2 0 FIP domain GIT_CC PF16559.5 CTQ30621.1 - 1 9.3 5.5 1.9 8.4 5.5 1.4 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor LysR_substrate PF03466.20 CTQ30623.1 - 2.2e-39 135.0 8.3 2.9e-39 134.6 8.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ30623.1 - 1e-17 63.8 1.8 1.9e-17 62.9 1.8 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 CTQ30623.1 - 0.008 15.7 0.2 0.024 14.2 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MFS_1 PF07690.16 CTQ30624.1 - 1.6e-54 185.2 53.8 2.1e-54 184.8 46.8 2.2 2 0 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ30624.1 - 2.7e-11 43.0 29.2 6.2e-11 41.8 12.8 2.6 2 0 0 2 2 2 2 Sugar (and other) transporter TRI12 PF06609.13 CTQ30624.1 - 3.4e-10 39.0 25.0 5.3e-09 35.1 25.0 2.4 1 1 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_1_like PF12832.7 CTQ30624.1 - 4.9e-06 25.7 6.9 4.9e-06 25.7 6.9 2.5 3 0 0 3 3 3 1 MFS_1 like family OATP PF03137.20 CTQ30624.1 - 0.32 9.2 10.8 0.05 11.9 1.0 2.4 2 0 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family TetR_N PF00440.23 CTQ30625.1 - 4.7e-13 48.7 0.1 7.6e-13 48.0 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family MerR PF00376.23 CTQ30625.1 - 0.00022 20.9 0.0 0.18 11.6 0.0 2.3 2 0 0 2 2 2 2 MerR family regulatory protein TetR_C_3 PF08362.11 CTQ30625.1 - 0.00043 20.3 0.1 0.00062 19.7 0.1 1.2 1 0 0 1 1 1 1 YcdC-like protein, C-terminal region TetR_C_29 PF17938.1 CTQ30625.1 - 0.0011 19.1 0.0 0.0019 18.3 0.0 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_11 PF16859.5 CTQ30625.1 - 0.0015 18.8 0.5 0.0085 16.4 0.1 2.3 1 1 2 3 3 3 1 Tetracyclin repressor-like, C-terminal domain TetR_C_21 PF17926.1 CTQ30625.1 - 0.0016 18.5 0.0 0.0035 17.5 0.0 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain MerR_1 PF13411.6 CTQ30625.1 - 0.014 15.5 0.0 4.3 7.5 0.0 2.3 2 0 0 2 2 2 0 MerR HTH family regulatory protein Exc PF07825.11 CTQ30625.1 - 0.1 12.6 0.0 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 Excisionase-like protein Acetyltransf_1 PF00583.25 CTQ30626.1 - 5.6e-12 45.9 0.0 6.2e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ30626.1 - 8.2e-11 41.9 0.1 9.3e-11 41.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ30626.1 - 1.9e-10 41.0 0.2 2.2e-10 40.8 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ30626.1 - 1.6e-06 28.0 0.1 2.5e-06 27.3 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 CTQ30626.1 - 0.0004 20.5 0.0 0.00053 20.1 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 CTQ30626.1 - 0.0012 19.0 0.0 0.0015 18.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 CTQ30626.1 - 0.0013 18.5 0.0 0.0019 17.9 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 CTQ30626.1 - 0.018 15.0 0.0 0.029 14.3 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_16 PF05301.11 CTQ30626.1 - 0.035 13.9 0.0 0.044 13.5 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 Acetyltransf_9 PF13527.7 CTQ30626.1 - 0.037 14.1 0.0 0.062 13.4 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain TRI12 PF06609.13 CTQ30627.1 - 0.12 10.8 0.0 0.12 10.7 0.0 1.0 1 0 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) HlyD_D23 PF16576.5 CTQ30628.1 - 6.9e-14 51.6 0.3 2.2e-13 50.0 0.3 1.8 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 CTQ30628.1 - 1e-09 39.0 1.7 4.9e-05 24.0 0.0 2.8 3 0 0 3 3 3 2 HlyD family secretion protein HlyD PF00529.20 CTQ30628.1 - 1.2e-09 37.9 0.4 4.9e-09 36.0 0.3 2.0 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl_2 PF13533.6 CTQ30628.1 - 1.4e-09 37.6 1.6 2.5e-08 33.6 0.1 3.3 3 0 0 3 3 3 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 CTQ30628.1 - 0.15 11.9 0.7 1.8 8.4 0.0 2.9 3 1 0 3 3 3 0 Biotin-requiring enzyme ACR_tran PF00873.19 CTQ30629.1 - 0 1225.8 15.0 0 1225.6 15.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 CTQ30629.1 - 6.6e-07 28.9 26.9 0.00031 20.2 12.3 2.4 2 0 0 2 2 2 2 Protein export membrane protein OEP PF02321.18 CTQ30630.1 - 2.2e-49 167.9 24.3 1.7e-28 99.8 3.4 2.0 2 0 0 2 2 2 2 Outer membrane efflux protein YkyA PF10368.9 CTQ30630.1 - 0.032 13.9 0.8 0.25 11.0 1.2 2.0 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein FliJ PF02050.16 CTQ30630.1 - 0.072 13.3 5.5 3.2 8.0 0.1 3.3 3 0 0 3 3 3 0 Flagellar FliJ protein MFS_1 PF07690.16 CTQ30631.1 - 4.1e-47 160.8 44.8 4.1e-47 160.8 44.8 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_4 PF06779.14 CTQ30631.1 - 8.2e-11 41.8 31.8 1.1e-10 41.4 31.8 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Sugar_tr PF00083.24 CTQ30631.1 - 4.3e-10 39.0 8.1 4.3e-10 39.0 8.1 2.2 1 1 0 2 2 2 1 Sugar (and other) transporter MFS_3 PF05977.13 CTQ30631.1 - 0.00092 17.7 27.5 0.0013 17.3 27.5 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector S10_plectin PF03501.15 CTQ30631.1 - 0.08 13.0 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Plectin/S10 domain ATP_synt_H PF05493.13 CTQ30631.1 - 4.8 7.7 7.8 32 5.1 0.2 4.0 3 0 0 3 3 3 0 ATP synthase subunit H SIS_2 PF13580.6 CTQ30632.1 - 5.2e-08 33.0 1.7 7.7e-08 32.4 0.4 2.0 2 1 0 2 2 2 1 SIS domain SIS PF01380.22 CTQ30632.1 - 7.1e-07 29.1 1.9 3.1e-06 27.1 0.1 2.4 2 1 0 2 2 2 1 SIS domain UBA_4 PF14555.6 CTQ30632.1 - 0.0018 18.0 1.4 0.098 12.5 0.1 3.2 2 1 1 3 3 3 1 UBA-like domain PTS_EIIC PF02378.18 CTQ30633.1 - 1.3e-33 116.5 35.4 1.3e-33 116.5 35.4 1.9 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ30633.1 - 9.5e-13 47.4 0.1 1.7e-12 46.6 0.1 1.5 1 0 0 1 1 1 1 phosphotransferase system, EIIB GSAP-16 PF14959.6 CTQ30633.1 - 0.21 11.5 0.1 0.48 10.3 0.0 1.6 2 0 0 2 2 2 0 gamma-Secretase-activating protein C-term EamA PF00892.20 CTQ30634.1 - 3e-40 137.6 40.7 1.8e-20 73.5 20.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family QCR10 PF09796.9 CTQ30634.1 - 1.5 8.9 6.9 0.41 10.7 0.7 3.0 3 0 0 3 3 3 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) DUF1932 PF09130.11 CTQ30636.1 - 1.3e-17 63.6 0.1 2.6e-17 62.5 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1932) NAD_binding_2 PF03446.15 CTQ30636.1 - 6.1e-09 36.2 0.0 1.3e-08 35.1 0.0 1.6 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 CTQ30636.1 - 0.00041 20.9 0.6 0.0025 18.4 0.1 2.5 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_11 PF14833.6 CTQ30636.1 - 0.063 13.5 0.2 0.16 12.2 0.0 1.9 2 0 0 2 2 2 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Sacchrp_dh_NADP PF03435.18 CTQ30636.1 - 0.078 13.2 0.0 0.16 12.3 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Uroplakin_II PF07353.12 CTQ30636.1 - 0.12 11.9 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 Uroplakin II NAD_Gly3P_dh_N PF01210.23 CTQ30636.1 - 0.12 12.3 0.4 1.5 8.8 0.4 2.4 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HET-S PF17108.5 CTQ30636.1 - 0.18 11.5 1.0 0.39 10.5 1.0 1.5 1 0 0 1 1 1 0 N-terminal small S protein of HET, non-prionic PrpF PF04303.13 CTQ30637.1 - 7.6e-111 370.7 0.0 8.8e-111 370.4 0.0 1.0 1 0 0 1 1 1 1 PrpF protein Pro_racemase PF05544.11 CTQ30637.1 - 0.019 14.0 0.1 0.042 12.9 0.0 1.5 2 0 0 2 2 2 0 Proline racemase RraA-like PF03737.15 CTQ30638.1 - 4e-37 127.7 2.9 5.5e-37 127.2 2.9 1.2 1 0 0 1 1 1 1 Aldolase/RraA PIG-L PF02585.17 CTQ30639.1 - 3.2e-23 82.8 0.2 4.4e-23 82.4 0.2 1.2 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase Glyco_trans_4_2 PF13477.6 CTQ30639.1 - 0.0062 16.6 0.1 0.18 11.8 0.1 2.2 1 1 0 1 1 1 1 Glycosyl transferase 4-like Sugar-bind PF04198.13 CTQ30639.1 - 0.082 12.0 0.1 0.12 11.4 0.1 1.3 1 0 0 1 1 1 0 Putative sugar-binding domain LysR_substrate PF03466.20 CTQ30640.1 - 3.3e-35 121.4 4.7 3.3e-35 121.4 4.7 1.6 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ30640.1 - 7.1e-34 115.6 2.1 4.4e-18 65.0 0.0 3.5 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 CTQ30640.1 - 0.0002 21.2 1.5 0.96 9.4 0.1 3.3 3 0 0 3 3 3 2 MarR family HTH_24 PF13412.6 CTQ30640.1 - 0.003 17.1 0.0 0.24 11.0 0.0 3.3 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding Cro PF09048.10 CTQ30640.1 - 0.0077 16.2 0.2 3.5 7.8 0.1 2.5 2 0 0 2 2 2 2 Cro HTH_23 PF13384.6 CTQ30640.1 - 0.024 14.5 0.1 2.6 8.0 0.0 2.6 2 0 0 2 2 2 0 Homeodomain-like domain TP6A_N PF04406.14 CTQ30640.1 - 0.03 14.3 0.1 0.1 12.6 0.0 1.9 2 0 0 2 2 2 0 Type IIB DNA topoisomerase HTH_CodY PF08222.11 CTQ30640.1 - 0.07 12.7 0.0 7 6.3 0.0 2.5 2 0 0 2 2 2 0 CodY helix-turn-helix domain MarR PF01047.22 CTQ30640.1 - 0.076 12.9 0.1 17 5.4 0.0 2.8 2 0 0 2 2 2 0 MarR family LigB PF02900.18 CTQ30641.1 - 9.6e-62 208.5 0.0 2.5e-61 207.2 0.0 1.6 2 0 0 2 2 2 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase LigA PF07746.11 CTQ30641.1 - 2e-33 114.4 0.1 3.7e-33 113.5 0.1 1.5 1 0 0 1 1 1 1 Aromatic-ring-opening dioxygenase LigAB, LigA subunit MFS_1 PF07690.16 CTQ30642.1 - 1.6e-53 181.9 66.0 1.1e-40 139.7 38.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ30642.1 - 2.2e-20 73.0 30.7 5.1e-20 71.8 11.3 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_4 PF06779.14 CTQ30642.1 - 1.4e-08 34.4 10.9 1.4e-08 34.4 10.9 2.2 1 1 0 2 2 2 1 Uncharacterised MFS-type transporter YbfB MFS_3 PF05977.13 CTQ30642.1 - 4.2e-06 25.4 5.7 4.2e-06 25.4 5.7 2.1 2 0 0 2 2 2 1 Transmembrane secretion effector MFS_1_like PF12832.7 CTQ30642.1 - 4e-05 22.6 8.2 4e-05 22.6 8.2 2.7 2 1 1 3 3 3 1 MFS_1 like family BT1 PF03092.16 CTQ30642.1 - 0.0051 15.1 0.2 0.0051 15.1 0.2 3.2 2 2 1 3 3 3 2 BT1 family LacI PF00356.21 CTQ30643.1 - 3.4e-18 65.1 0.6 6.5e-18 64.2 0.6 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_3 PF13377.6 CTQ30643.1 - 6.2e-09 36.4 0.0 2.4e-08 34.5 0.0 1.8 2 0 0 2 2 2 1 Periplasmic binding protein-like domain HTH_31 PF13560.6 CTQ30643.1 - 2.1e-05 24.8 0.2 6e-05 23.3 0.2 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ30643.1 - 0.0056 16.7 0.2 0.013 15.5 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix ArgJ PF01960.18 CTQ30643.1 - 0.066 11.9 0.1 0.11 11.1 0.1 1.3 1 0 0 1 1 1 0 ArgJ family HTH_IclR PF09339.10 CTQ30643.1 - 0.12 12.2 0.0 0.3 10.9 0.0 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 CTQ30643.1 - 0.13 11.7 0.2 0.27 10.7 0.2 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 PTS_IIB PF02302.17 CTQ30644.1 - 1.5e-18 67.3 0.0 1.6e-18 67.1 0.0 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit PTS_EIIC PF02378.18 CTQ30645.1 - 1.1e-51 175.8 27.7 1.7e-51 175.2 27.7 1.3 1 0 0 1 1 1 1 Phosphotransferase system, EIIC PTS_IIA PF02255.16 CTQ30646.1 - 1.5e-31 108.3 2.1 1.7e-31 108.1 2.1 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIA subunit DDE_3 PF13358.6 CTQ30647.1 - 1.4e-24 86.5 0.0 2.2e-24 85.9 0.0 1.3 1 0 0 1 1 1 1 DDE superfamily endonuclease HTH_23 PF13384.6 CTQ30647.1 - 1.8e-11 43.5 0.5 4.5e-10 39.0 0.1 2.8 2 0 0 2 2 2 1 Homeodomain-like domain HTH_32 PF13565.6 CTQ30647.1 - 1.4e-08 35.2 0.3 1.4e-08 35.2 0.3 2.3 3 0 0 3 3 3 1 Homeodomain-like domain HTH_29 PF13551.6 CTQ30647.1 - 2.2e-08 34.0 1.4 7.5e-08 32.3 0.5 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 CTQ30647.1 - 5.4e-07 29.6 0.9 2.7e-06 27.4 0.2 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_33 PF13592.6 CTQ30647.1 - 1.8e-06 27.5 0.4 1.8e-06 27.5 0.4 2.7 3 0 0 3 3 3 1 Winged helix-turn helix HTH_38 PF13936.6 CTQ30647.1 - 0.079 12.7 0.1 0.19 11.5 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain ABC_tran PF00005.27 CTQ30648.1 - 9.7e-26 90.9 0.0 1.7e-25 90.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30648.1 - 6.1e-08 32.8 4.6 4e-06 26.9 0.8 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ30648.1 - 7.1e-06 25.7 0.8 1.6e-05 24.5 0.8 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 CTQ30648.1 - 8.1e-06 25.4 0.7 0.00049 19.6 0.3 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CTQ30648.1 - 3e-05 24.6 0.7 4.5e-05 24.0 0.7 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 CTQ30648.1 - 0.00086 19.1 0.5 0.0012 18.6 0.5 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 CTQ30648.1 - 0.0023 17.6 0.1 0.0043 16.6 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ30648.1 - 0.0025 18.2 0.2 0.004 17.5 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain Phage_AlpA PF05930.12 CTQ30648.1 - 0.0047 16.7 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 Prophage CP4-57 regulatory protein (AlpA) NACHT PF05729.12 CTQ30648.1 - 0.0071 16.3 0.0 0.014 15.4 0.0 1.5 1 0 0 1 1 1 1 NACHT domain AAA_30 PF13604.6 CTQ30648.1 - 0.014 15.1 1.9 0.033 13.9 0.2 2.1 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 CTQ30648.1 - 0.015 15.4 0.1 0.032 14.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 CTQ30648.1 - 0.017 14.5 0.1 0.031 13.7 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ABC_ATPase PF09818.9 CTQ30648.1 - 0.017 14.0 3.6 0.022 13.6 2.0 1.8 2 0 0 2 2 2 0 Predicted ATPase of the ABC class SbcCD_C PF13558.6 CTQ30648.1 - 0.018 15.2 0.5 0.15 12.3 0.5 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 CTQ30648.1 - 0.022 15.1 2.0 0.07 13.4 0.2 2.1 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 CTQ30648.1 - 0.034 14.1 0.2 0.065 13.1 0.2 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_27 PF13514.6 CTQ30648.1 - 0.053 13.1 0.1 0.086 12.4 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.7 CTQ30648.1 - 0.061 12.2 0.0 0.099 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain ATPase_2 PF01637.18 CTQ30648.1 - 0.07 13.0 0.1 0.14 12.0 0.1 1.7 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 CTQ30648.1 - 0.12 12.4 0.3 3.7 7.6 0.1 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA PF00004.29 CTQ30648.1 - 0.15 12.4 0.5 0.67 10.4 0.5 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF839 PF05787.13 CTQ30649.1 - 4.2e-181 603.7 1.8 4.8e-181 603.5 1.8 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF839) TAT_signal PF10518.9 CTQ30649.1 - 0.0074 16.1 0.1 0.0074 16.1 0.1 1.9 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence Phage_integrase PF00589.22 CTQ30650.1 - 3.5e-19 69.2 0.0 7.7e-19 68.1 0.0 1.5 1 0 0 1 1 1 1 Phage integrase family Arm-DNA-bind_3 PF13356.6 CTQ30650.1 - 7.9e-18 64.6 0.0 1.4e-17 63.8 0.0 1.5 1 0 0 1 1 1 1 Arm DNA-binding domain Phage_int_SAM_3 PF14659.6 CTQ30650.1 - 0.00013 22.1 0.0 0.00029 21.1 0.0 1.6 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Peripla_BP_2 PF01497.18 CTQ30653.1 - 4.6e-22 78.7 0.0 5.6e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Thioredox_DsbH PF03190.15 CTQ30653.1 - 0.18 11.8 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF255 FecCD PF01032.18 CTQ30654.1 - 8.5e-82 274.6 34.9 1e-81 274.4 34.9 1.0 1 0 0 1 1 1 1 FecCD transport family DUF1294 PF06961.13 CTQ30654.1 - 0.091 13.0 0.1 0.091 13.0 0.1 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF1294) ABC-3 PF00950.17 CTQ30654.1 - 0.49 9.8 20.7 0.1 12.1 16.1 2.3 1 1 0 1 1 1 0 ABC 3 transport family FUR PF01475.19 CTQ30656.1 - 4.8e-08 33.2 0.0 6e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family PadR PF03551.14 CTQ30656.1 - 0.023 14.7 0.0 0.036 14.0 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family PRA-CH PF01502.18 CTQ30657.1 - 6.7e-35 118.8 1.1 9.4e-35 118.3 1.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase cobW PF02492.19 CTQ30658.1 - 1.4e-59 200.6 0.3 1.8e-59 200.3 0.3 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 CTQ30658.1 - 4.3e-28 97.1 0.1 1.1e-27 95.8 0.1 1.7 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 CTQ30658.1 - 2.3e-05 24.4 0.1 0.071 13.0 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase MeaB PF03308.16 CTQ30658.1 - 0.0028 16.7 0.1 0.19 10.7 0.0 2.3 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 CTQ30658.1 - 0.0092 16.4 0.1 0.023 15.1 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain T2SSE PF00437.20 CTQ30658.1 - 0.011 14.9 0.2 0.022 13.8 0.0 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein ATPase_2 PF01637.18 CTQ30658.1 - 0.016 15.1 0.0 0.029 14.3 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea TsaE PF02367.17 CTQ30658.1 - 0.024 14.6 0.0 0.046 13.7 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Viral_helicase1 PF01443.18 CTQ30658.1 - 0.043 13.5 0.0 0.069 12.9 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Zeta_toxin PF06414.12 CTQ30658.1 - 0.092 12.0 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin MobB PF03205.14 CTQ30658.1 - 0.099 12.5 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_22 PF13401.6 CTQ30658.1 - 0.12 12.6 0.1 0.42 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain GTP_EFTU PF00009.27 CTQ30658.1 - 0.12 11.9 0.1 19 4.7 0.0 2.3 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain ABC_tran PF00005.27 CTQ30658.1 - 0.14 12.7 0.1 0.33 11.5 0.1 1.8 1 1 0 1 1 1 0 ABC transporter MMR_HSR1 PF01926.23 CTQ30658.1 - 0.18 11.9 0.1 0.49 10.5 0.0 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase FeoB_N PF02421.18 CTQ30659.1 - 7e-13 48.4 0.0 1.1e-12 47.7 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 CTQ30659.1 - 6.9e-12 45.6 7.7 3.2e-05 24.2 2.5 2.9 3 0 0 3 3 3 2 Nucleoside recognition MMR_HSR1 PF01926.23 CTQ30659.1 - 8.1e-12 45.2 0.0 1.5e-11 44.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 CTQ30659.1 - 1.9e-07 31.3 0.2 3.2e-05 24.1 0.0 2.2 1 1 1 2 2 2 2 Dynamin family RsgA_GTPase PF03193.16 CTQ30659.1 - 0.0043 17.0 0.0 0.02 14.8 0.0 2.0 2 0 0 2 2 2 1 RsgA GTPase SRPRB PF09439.10 CTQ30659.1 - 0.045 13.2 0.0 0.068 12.6 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Pyr_redox_3 PF13738.6 CTQ30660.1 - 2.2e-92 309.6 0.0 2.5e-92 309.4 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 CTQ30660.1 - 3.2e-10 39.7 0.0 8.4e-10 38.3 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 CTQ30660.1 - 6.9e-06 26.1 0.1 0.035 14.1 0.2 3.0 2 1 0 2 2 2 2 FAD-NAD(P)-binding K_oxygenase PF13434.6 CTQ30660.1 - 3.2e-05 23.2 0.0 0.014 14.6 0.0 2.5 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 CTQ30660.1 - 8.3e-05 21.5 0.1 0.15 10.8 0.5 2.6 4 0 0 4 4 4 2 HI0933-like protein FAD_binding_3 PF01494.19 CTQ30660.1 - 0.0013 18.0 0.4 0.0021 17.4 0.4 1.2 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 CTQ30660.1 - 0.002 18.3 0.1 0.0057 16.8 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 CTQ30660.1 - 0.0036 17.8 0.5 1.1 9.9 0.5 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 CTQ30660.1 - 0.0039 16.3 0.0 0.092 11.8 0.1 2.6 3 0 0 3 3 3 1 Lycopene cyclase protein Etmic-2 PF06670.11 CTQ30660.1 - 0.0054 15.7 0.0 0.008 15.2 0.0 1.1 1 0 0 1 1 1 1 Microneme protein Etmic-2 DAO PF01266.24 CTQ30660.1 - 0.011 15.4 0.1 0.029 14.0 0.1 1.7 1 0 0 1 1 1 0 FAD dependent oxidoreductase Trp_halogenase PF04820.14 CTQ30660.1 - 0.041 12.7 0.4 0.064 12.1 0.4 1.2 1 0 0 1 1 1 0 Tryptophan halogenase GIDA PF01134.22 CTQ30660.1 - 0.05 12.7 0.2 3.2 6.7 0.4 2.8 3 0 0 3 3 3 0 Glucose inhibited division protein A DUF4147 PF13660.6 CTQ30660.1 - 0.091 12.3 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4147) TrkA_N PF02254.18 CTQ30660.1 - 0.13 12.6 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Thi4 PF01946.17 CTQ30660.1 - 0.24 10.6 0.7 0.81 8.9 0.1 1.9 2 0 0 2 2 2 0 Thi4 family tRNA-synt_1e PF01406.19 CTQ30661.1 - 4.2e-134 446.6 0.0 5.3e-134 446.3 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DALR_2 PF09190.11 CTQ30661.1 - 3.5e-23 81.8 0.9 7.2e-23 80.8 0.9 1.6 1 0 0 1 1 1 1 DALR domain tRNA-synt_1g PF09334.11 CTQ30661.1 - 4.2e-15 55.4 0.2 2.7e-07 29.7 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 CTQ30661.1 - 6.4e-08 31.3 0.0 3.2e-05 22.4 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 CTQ30661.1 - 3.1e-05 23.1 0.0 0.018 14.0 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) FUR PF01475.19 CTQ30662.1 - 4.7e-10 39.7 0.6 1.4e-09 38.1 0.0 1.8 1 1 1 2 2 2 1 Ferric uptake regulator family SNCAIP_SNCA_bd PF16700.5 CTQ30662.1 - 0.0011 18.6 0.5 0.002 17.8 0.5 1.5 1 0 0 1 1 1 1 Synphilin-1 alpha-Synuclein-binding domain PadR PF03551.14 CTQ30662.1 - 0.03 14.3 0.0 0.057 13.4 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Gin PF10764.9 CTQ30662.1 - 0.13 12.2 0.8 0.47 10.4 0.1 2.0 2 0 0 2 2 2 0 Inhibitor of sigma-G Gin zf_UBZ PF18439.1 CTQ30662.1 - 0.14 11.8 7.0 1 9.0 0.1 2.9 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger Sgf11 PF08209.11 CTQ30662.1 - 0.27 10.8 1.6 13 5.4 0.1 2.5 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) RNA_POL_M_15KD PF02150.16 CTQ30662.1 - 0.36 10.7 2.6 1.3 9.0 0.0 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit cobW PF02492.19 CTQ30663.1 - 3.7e-25 88.5 0.0 5.8e-25 87.9 0.0 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 CTQ30663.1 - 1.7e-18 66.3 0.0 3.3e-18 65.4 0.0 1.5 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain MobB PF03205.14 CTQ30663.1 - 1.2e-05 25.3 0.0 1.9e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 CTQ30663.1 - 0.0004 20.9 0.0 0.00074 20.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ30663.1 - 0.00046 20.5 0.3 0.002 18.4 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 CTQ30663.1 - 0.001 19.5 0.4 0.0049 17.3 0.2 2.3 2 1 0 2 2 1 1 AAA ATPase domain MeaB PF03308.16 CTQ30663.1 - 0.0017 17.4 0.0 0.0028 16.7 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB TsaE PF02367.17 CTQ30663.1 - 0.0032 17.5 0.1 0.0063 16.5 0.1 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE TrwB_AAD_bind PF10412.9 CTQ30663.1 - 0.0042 16.0 0.1 0.029 13.3 0.0 2.0 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain SRPRB PF09439.10 CTQ30663.1 - 0.0093 15.4 0.2 0.02 14.4 0.1 1.6 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_33 PF13671.6 CTQ30663.1 - 0.011 15.8 0.0 0.019 15.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 CTQ30663.1 - 0.016 14.3 0.1 0.025 13.6 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 CTQ30663.1 - 0.017 15.0 0.2 0.12 12.3 0.0 2.3 3 0 0 3 3 2 0 NACHT domain AAA_14 PF13173.6 CTQ30663.1 - 0.018 15.1 0.3 0.11 12.5 0.1 2.3 2 1 0 2 2 2 0 AAA domain SRP54 PF00448.22 CTQ30663.1 - 0.029 14.0 0.1 0.081 12.5 0.1 1.7 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain PduV-EutP PF10662.9 CTQ30663.1 - 0.046 13.5 0.0 0.1 12.4 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ATPase_2 PF01637.18 CTQ30663.1 - 0.064 13.2 0.0 5 7.0 0.0 2.3 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Viral_helicase1 PF01443.18 CTQ30663.1 - 0.074 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Guanylate_kin PF00625.21 CTQ30663.1 - 0.077 12.7 0.0 0.17 11.5 0.0 1.6 1 0 0 1 1 1 0 Guanylate kinase Zeta_toxin PF06414.12 CTQ30663.1 - 0.078 12.3 0.0 0.18 11.0 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin KTI12 PF08433.10 CTQ30663.1 - 0.081 12.4 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DnaB_C PF03796.15 CTQ30663.1 - 0.092 12.1 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain KAP_NTPase PF07693.14 CTQ30663.1 - 0.13 11.5 0.0 0.18 11.0 0.0 1.3 1 0 0 1 1 1 0 KAP family P-loop domain AAA_30 PF13604.6 CTQ30663.1 - 0.13 11.9 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 CTQ30663.1 - 0.14 12.7 0.0 0.24 11.9 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA PF00004.29 CTQ30663.1 - 0.18 12.3 0.2 1.3 9.5 0.1 2.4 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) zf-dskA_traR PF01258.17 CTQ30664.1 - 3.5e-09 36.4 0.0 5.9e-09 35.7 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger Complex1_LYR PF05347.15 CTQ30664.1 - 0.058 13.4 1.6 9.9 6.3 0.3 2.6 2 0 0 2 2 2 0 Complex 1 protein (LYR family) GCHY-1 PF02649.14 CTQ30665.1 - 6.1e-68 229.1 0.0 7.1e-68 228.9 0.0 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 Hexapep PF00132.24 CTQ30666.1 - 7.5e-16 57.2 14.3 2.6e-06 26.9 0.3 4.5 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Fucokinase PF07959.12 CTQ30666.1 - 0.0017 17.4 0.1 0.0034 16.4 0.1 1.4 1 1 0 1 1 1 1 L-fucokinase Hexapep_2 PF14602.6 CTQ30666.1 - 0.51 10.1 8.9 4.5 7.1 0.1 3.5 3 1 0 3 3 3 0 Hexapeptide repeat of succinyl-transferase PTPS PF01242.19 CTQ30667.1 - 4.5e-11 42.8 6.5 0.00015 21.7 0.1 3.1 2 1 0 2 2 2 2 6-pyruvoyl tetrahydropterin synthase DUF1460 PF07313.12 CTQ30668.1 - 9.3e-78 260.5 0.2 1.2e-77 260.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1460) ABC-3 PF00950.17 CTQ30669.1 - 2e-73 247.1 27.1 2.2e-73 246.9 27.1 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 CTQ30669.1 - 1.9e-05 23.9 26.8 1.9e-05 23.9 26.8 1.2 1 1 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 CTQ30670.1 - 2.2e-81 273.2 24.1 2.4e-81 273.0 24.1 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 CTQ30670.1 - 5.4e-11 42.1 22.3 5.4e-11 42.1 22.3 1.7 1 1 1 2 2 2 1 FecCD transport family ABC_tran PF00005.27 CTQ30671.1 - 8.9e-27 94.3 0.0 1.2e-26 93.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30671.1 - 1.4e-11 44.8 0.2 2.1e-06 27.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30671.1 - 2.1e-05 24.0 0.1 0.033 13.6 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ30671.1 - 0.00017 21.2 0.1 0.00039 20.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 CTQ30671.1 - 0.007 16.6 0.0 0.14 12.4 0.0 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 CTQ30671.1 - 0.041 14.4 0.1 0.098 13.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 CTQ30671.1 - 0.1 12.7 0.1 0.28 11.3 0.1 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_13 PF13166.6 CTQ30671.1 - 0.21 10.2 0.2 14 4.2 0.2 2.0 2 0 0 2 2 2 0 AAA domain ZnuA PF01297.17 CTQ30672.1 - 2.5e-70 236.8 0.0 2.9e-70 236.6 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic DUF5339 PF17274.2 CTQ30672.1 - 0.13 13.1 0.1 0.36 11.7 0.1 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5339) tRNA-synt_2b PF00587.25 CTQ30673.1 - 4.7e-41 140.7 0.0 6.9e-41 140.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 CTQ30673.1 - 8.7e-18 64.3 0.1 5.8e-17 61.6 0.2 2.3 2 0 0 2 2 2 1 Anticodon binding domain TGS PF02824.21 CTQ30673.1 - 1e-08 35.1 0.0 1.9e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 TGS domain tRNA_SAD PF07973.14 CTQ30673.1 - 0.02 15.0 0.0 0.043 13.9 0.0 1.5 1 0 0 1 1 1 0 Threonyl and Alanyl tRNA synthetase second additional domain AstE_AspA PF04952.14 CTQ30674.1 - 0.0017 17.5 0.0 0.0023 17.0 0.0 1.2 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Amidohydro_1 PF01979.20 CTQ30675.1 - 1.3e-17 64.2 0.1 2.4e-16 60.0 0.1 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 CTQ30675.1 - 6.4e-08 32.5 0.9 3e-05 23.7 0.0 2.7 2 1 0 3 3 3 2 Amidohydrolase family WG_beta_rep PF14903.6 CTQ30675.1 - 0.11 12.8 0.1 0.27 11.6 0.1 1.6 1 0 0 1 1 1 0 WG containing repeat ALAD PF00490.21 CTQ30676.1 - 7.3e-136 452.5 0.1 8.3e-136 452.3 0.1 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase DAO PF01266.24 CTQ30678.1 - 3.9e-40 138.5 0.2 4.5e-40 138.3 0.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 CTQ30678.1 - 1.1e-08 34.7 0.0 6.3e-05 22.3 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 CTQ30678.1 - 3.3e-08 33.7 0.7 0.002 18.1 0.3 2.4 2 1 0 2 2 2 2 FAD-NAD(P)-binding HI0933_like PF03486.14 CTQ30678.1 - 3.1e-07 29.4 3.3 0.0045 15.7 0.1 2.4 2 0 0 2 2 2 2 HI0933-like protein NAD_binding_8 PF13450.6 CTQ30678.1 - 8.6e-07 29.1 1.0 6e-06 26.4 1.2 2.1 1 1 1 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 CTQ30678.1 - 6.2e-06 26.7 3.1 7.2e-05 23.3 0.9 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 CTQ30678.1 - 4.1e-05 23.6 0.0 7.5e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Amino_oxidase PF01593.24 CTQ30678.1 - 4.3e-05 23.0 0.0 0.13 11.5 0.1 2.4 2 1 0 2 2 2 2 Flavin containing amine oxidoreductase Pyr_redox_3 PF13738.6 CTQ30678.1 - 0.00019 20.8 0.0 0.12 11.6 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_2 PF03446.15 CTQ30678.1 - 0.00038 20.7 0.1 0.00072 19.8 0.1 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_7 PF13241.6 CTQ30678.1 - 0.00052 20.4 0.0 0.0011 19.3 0.0 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding FAD_binding_2 PF00890.24 CTQ30678.1 - 0.00056 19.1 5.1 0.0045 16.1 3.2 2.5 2 1 1 3 3 3 1 FAD binding domain Thi4 PF01946.17 CTQ30678.1 - 0.00072 18.9 0.3 0.0012 18.1 0.3 1.3 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 CTQ30678.1 - 0.00085 18.5 0.1 0.13 11.3 0.2 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_Gly3P_dh_N PF01210.23 CTQ30678.1 - 0.0011 19.0 0.5 0.0025 17.8 0.1 1.8 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Shikimate_DH PF01488.20 CTQ30678.1 - 0.0017 18.4 0.1 0.0039 17.3 0.1 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 CTQ30678.1 - 0.002 17.4 0.1 0.0043 16.4 0.1 1.5 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain ApbA PF02558.16 CTQ30678.1 - 0.002 17.8 0.1 0.0036 16.9 0.1 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA FMO-like PF00743.19 CTQ30678.1 - 0.0028 16.2 0.1 0.004 15.6 0.1 1.2 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like FAD_binding_3 PF01494.19 CTQ30678.1 - 0.0029 16.9 0.0 0.0041 16.4 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain 2-Hacid_dh_C PF02826.19 CTQ30678.1 - 0.0068 15.8 0.2 0.015 14.7 0.2 1.6 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 CTQ30678.1 - 0.0084 16.4 0.0 0.029 14.6 0.0 1.9 2 0 0 2 2 1 1 TrkA-N domain F420_oxidored PF03807.17 CTQ30678.1 - 0.017 15.7 0.5 0.044 14.4 0.2 1.8 2 0 0 2 2 1 0 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 CTQ30678.1 - 0.019 14.5 0.1 0.039 13.5 0.1 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Lycopene_cycl PF05834.12 CTQ30678.1 - 0.028 13.5 0.0 0.37 9.8 0.0 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein IlvN PF07991.12 CTQ30678.1 - 0.14 11.7 0.1 0.22 11.1 0.1 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Cytochrom_D1 PF02239.16 CTQ30679.1 - 0.0049 15.4 0.1 0.29 9.6 0.0 2.3 1 1 0 2 2 2 2 Cytochrome D1 heme domain ZnuA PF01297.17 CTQ30680.1 - 4.2e-78 262.3 0.1 4.7e-78 262.1 0.1 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Ribosomal_S8 PF00410.19 CTQ30680.1 - 0.0098 15.8 0.0 0.063 13.2 0.0 2.1 2 0 0 2 2 2 1 Ribosomal protein S8 DUF276 PF03434.13 CTQ30680.1 - 0.017 14.3 0.1 0.023 13.9 0.1 1.2 1 0 0 1 1 1 0 DUF276 HEM4 PF02602.15 CTQ30680.1 - 0.039 13.3 0.1 0.057 12.8 0.1 1.2 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD ABC-3 PF00950.17 CTQ30681.1 - 2.8e-53 181.1 33.5 3.4e-53 180.8 33.5 1.0 1 0 0 1 1 1 1 ABC 3 transport family DUF1534 PF07551.11 CTQ30681.1 - 0.041 13.6 0.4 0.09 12.5 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1534) rve PF00665.26 CTQ30683.1 - 1.4e-31 109.2 0.0 2.4e-31 108.4 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.6 CTQ30683.1 - 2.5e-13 49.9 1.8 2.5e-13 49.9 1.8 2.0 2 0 0 2 2 2 1 HTH-like domain rve_2 PF13333.6 CTQ30683.1 - 7.8e-13 48.4 0.2 1.3e-12 47.7 0.2 1.3 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 CTQ30683.1 - 7.7e-12 44.8 0.1 1.7e-11 43.7 0.1 1.6 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 CTQ30683.1 - 1e-07 32.3 0.3 1.7e-07 31.5 0.3 1.4 1 0 0 1 1 1 1 DDE domain HTH_Tnp_1 PF01527.20 CTQ30684.1 - 3.1e-16 59.4 0.1 4.3e-16 59.0 0.1 1.2 1 0 0 1 1 1 1 Transposase HTH_23 PF13384.6 CTQ30684.1 - 1.8e-06 27.6 2.4 2.5e-06 27.1 0.2 2.0 1 1 1 2 2 2 1 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 CTQ30684.1 - 2.8e-05 23.5 0.0 4.3e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_28 PF13518.6 CTQ30684.1 - 3.4e-05 23.9 0.2 7.2e-05 22.8 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_17 PF12728.7 CTQ30684.1 - 0.00034 20.7 0.0 0.00098 19.3 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_22 PF13309.6 CTQ30684.1 - 0.00049 20.1 0.0 0.0017 18.4 0.0 1.9 1 1 0 1 1 1 1 HTH domain TetR_N PF00440.23 CTQ30684.1 - 0.00054 19.7 0.2 0.003 17.3 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_3 PF01381.22 CTQ30684.1 - 0.00063 19.7 0.0 0.0032 17.5 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix HTH_10 PF04967.12 CTQ30684.1 - 0.0007 19.4 0.1 0.021 14.6 0.0 2.2 2 0 0 2 2 2 1 HTH DNA binding domain HTH_31 PF13560.6 CTQ30684.1 - 0.0025 18.1 0.2 0.004 17.5 0.2 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 CTQ30684.1 - 0.004 17.1 0.0 0.009 16.0 0.0 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain LZ_Tnp_IS481 PF13011.6 CTQ30684.1 - 0.0044 17.5 0.1 0.0056 17.2 0.1 1.4 1 1 0 1 1 1 1 leucine-zipper of insertion element IS481 HTH_7 PF02796.15 CTQ30684.1 - 0.0078 16.3 0.0 0.015 15.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase MerR PF00376.23 CTQ30684.1 - 0.0085 15.8 0.0 0.017 14.9 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR_1 PF13411.6 CTQ30684.1 - 0.011 15.8 0.0 0.024 14.7 0.0 1.6 1 0 0 1 1 1 0 MerR HTH family regulatory protein HTH_Tnp_1_2 PF13022.6 CTQ30684.1 - 0.011 15.8 0.0 0.015 15.4 0.0 1.3 1 1 0 1 1 1 0 Helix-turn-helix of insertion element transposase Terminase_5 PF06056.12 CTQ30684.1 - 0.014 15.3 0.0 0.025 14.5 0.0 1.5 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) Sigma70_r4_2 PF08281.12 CTQ30684.1 - 0.021 14.5 1.8 0.039 13.6 0.1 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 zf-CCCH_6 PF18585.1 CTQ30684.1 - 0.023 14.5 0.1 0.055 13.4 0.1 1.6 2 0 0 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 Sigma70_r4 PF04545.16 CTQ30684.1 - 0.028 13.9 0.8 0.43 10.1 0.3 2.6 2 1 1 3 3 3 0 Sigma-70, region 4 HTH_Tnp_IS630 PF01710.16 CTQ30684.1 - 0.038 14.0 0.2 0.051 13.6 0.2 1.2 1 1 0 1 1 1 0 Transposase Bap31_Bap29_C PF18035.1 CTQ30684.1 - 0.049 13.6 0.3 0.072 13.1 0.3 1.3 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain HTH_38 PF13936.6 CTQ30684.1 - 0.062 13.1 0.8 0.26 11.1 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_26 PF13443.6 CTQ30684.1 - 0.098 13.1 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF2946 PF11162.8 CTQ30686.1 - 8e-06 26.5 4.0 9e-06 26.3 4.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2946) TonB_dep_Rec PF00593.24 CTQ30687.1 - 2.2e-44 153.1 20.6 3e-44 152.7 20.6 1.1 1 0 0 1 1 1 1 TonB dependent receptor Plug PF07715.15 CTQ30687.1 - 6e-09 36.4 0.1 2.4e-08 34.5 0.0 2.0 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain OMP_b-brl PF13505.6 CTQ30687.1 - 0.0072 16.5 3.3 0.0072 16.5 3.3 3.5 2 1 2 4 4 4 2 Outer membrane protein beta-barrel domain DUF2534 PF10749.9 CTQ30688.1 - 6.5e-36 122.4 1.4 7.3e-36 122.2 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2534) DUF716 PF04819.12 CTQ30688.1 - 0.013 15.1 0.2 0.015 14.9 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF716) WTF PF03303.13 CTQ30688.1 - 0.15 11.8 1.1 0.17 11.6 1.1 1.1 1 0 0 1 1 1 0 WTF protein DDOST_48kD PF03345.14 CTQ30688.1 - 0.16 10.8 0.2 0.19 10.6 0.2 1.1 1 0 0 1 1 1 0 Oligosaccharyltransferase 48 kDa subunit beta FtsX PF02687.21 CTQ30688.1 - 0.34 11.4 4.0 0.42 11.1 4.0 1.1 1 0 0 1 1 1 0 FtsX-like permease family HTH_Tnp_IS1 PF12759.7 CTQ30689.1 - 2.7e-31 106.9 0.4 4.1e-31 106.3 0.4 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 CTQ30689.1 - 1.4e-21 75.9 6.2 1.4e-21 75.9 6.2 1.9 2 0 0 2 2 2 1 InsA N-terminal domain FdhE PF04216.12 CTQ30689.1 - 0.0029 17.5 1.1 0.0032 17.4 1.1 1.1 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation zinc_ribbon_4 PF13717.6 CTQ30689.1 - 0.0062 16.4 2.9 0.014 15.3 2.9 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 CTQ30689.1 - 0.0062 16.3 0.0 0.01 15.6 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain zinc_ribbon_10 PF10058.9 CTQ30689.1 - 0.0079 15.9 0.8 0.013 15.2 0.8 1.3 1 0 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein HTH_28 PF13518.6 CTQ30689.1 - 0.016 15.3 0.0 0.024 14.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Zn_Tnp_IS1595 PF12760.7 CTQ30689.1 - 0.06 13.3 1.8 0.12 12.4 1.8 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Elf1 PF05129.13 CTQ30689.1 - 0.063 13.3 0.2 0.078 13.0 0.2 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zf-Dof PF02701.15 CTQ30689.1 - 0.085 13.0 4.6 0.19 11.9 4.3 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger zf-ISL3 PF14690.6 CTQ30689.1 - 0.32 11.7 5.0 5.3 7.8 0.2 2.6 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DDE_Tnp_IS1 PF03400.13 CTQ30690.1 - 1.7e-46 157.8 0.3 1.8e-46 157.7 0.3 1.0 1 0 0 1 1 1 1 IS1 transposase Mac PF12464.8 CTQ30691.1 - 1.1e-06 28.7 0.0 1.4e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Maltose acetyltransferase LacY_symp PF01306.19 CTQ30692.1 - 7.7e-205 680.4 42.5 8.8e-205 680.2 42.5 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1 PF07690.16 CTQ30692.1 - 6.7e-23 81.2 55.8 2.7e-21 75.9 42.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 CTQ30692.1 - 1.4e-20 73.6 41.6 4e-20 72.0 41.6 1.7 1 1 0 1 1 1 1 MFS_1 like family DUF5432 PF17497.2 CTQ30692.1 - 1.6 8.9 7.4 0.6 10.2 3.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5432) Glyco_hydro_2_C PF02836.17 CTQ30694.1 - 7.7e-125 416.0 0.0 1e-124 415.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Glyco_hydro_2_N PF02837.18 CTQ30694.1 - 9.6e-73 243.6 0.2 2.8e-72 242.1 0.1 1.9 2 0 0 2 2 2 1 Glycosyl hydrolases family 2, sugar binding domain Bgal_small_N PF02929.17 CTQ30694.1 - 3.5e-60 203.6 0.1 5.5e-60 203.0 0.1 1.3 1 0 0 1 1 1 1 Beta galactosidase small chain DUF4981 PF16353.5 CTQ30694.1 - 2.5e-17 63.2 0.0 7.3e-17 61.6 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function(DUF4981) Glyco_hydro_2 PF00703.21 CTQ30694.1 - 6.5e-16 59.0 0.0 1.9e-15 57.5 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolases family 2 Peripla_BP_3 PF13377.6 CTQ30695.1 - 1.1e-31 110.4 0.5 2.6e-31 109.2 0.0 1.9 2 1 0 2 2 2 1 Periplasmic binding protein-like domain LacI PF00356.21 CTQ30695.1 - 1.1e-22 79.6 3.2 7.1e-22 76.9 1.9 2.6 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family Peripla_BP_1 PF00532.21 CTQ30695.1 - 1.1e-20 74.3 0.2 1.6e-20 73.7 0.2 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 CTQ30695.1 - 2.5e-15 56.8 0.0 3.8e-15 56.2 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_Crp_2 PF13545.6 CTQ30695.1 - 0.0021 18.0 0.0 0.017 15.1 0.0 2.5 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_3 PF01381.22 CTQ30695.1 - 0.0023 18.0 0.1 0.019 15.0 0.0 2.5 3 0 0 3 3 3 1 Helix-turn-helix Sigma54_DBD PF04552.13 CTQ30695.1 - 0.03 14.0 0.0 0.084 12.6 0.0 1.7 1 0 0 1 1 1 0 Sigma-54, DNA binding domain HTH_Tnp_ISL3 PF13542.6 CTQ30695.1 - 0.042 13.3 0.2 0.41 10.1 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 TrmB PF01978.19 CTQ30695.1 - 0.072 13.0 0.1 0.15 12.0 0.1 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB ADH_zinc_N_2 PF13602.6 CTQ30697.1 - 1.2e-10 42.6 0.0 2.1e-10 41.8 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 CTQ30697.1 - 1.2e-08 35.0 0.0 4.3e-08 33.2 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 CTQ30697.1 - 2e-08 34.1 0.0 3.2e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain EAL PF00563.20 CTQ30698.1 - 1.3e-06 28.1 0.0 1.4e-06 28.0 0.0 1.0 1 0 0 1 1 1 1 EAL domain TnpB_IS66 PF05717.13 CTQ30700.1 - 4.9e-38 129.1 0.0 5.9e-38 128.9 0.0 1.1 1 0 0 1 1 1 1 IS66 Orf2 like protein ABC_tran PF00005.27 CTQ30701.1 - 2e-33 115.8 0.0 2.7e-33 115.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30701.1 - 3e-12 47.0 0.3 8.6e-05 22.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30701.1 - 2.5e-09 36.9 0.0 0.0002 20.9 0.0 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ30701.1 - 4.8e-06 26.2 0.1 1.1e-05 25.1 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CTQ30701.1 - 6e-06 26.2 0.0 0.0047 16.7 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 CTQ30701.1 - 1.4e-05 25.7 0.0 1.7e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ30701.1 - 0.00014 22.3 0.2 0.00037 20.9 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ30701.1 - 0.00046 20.1 0.1 0.0011 18.8 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase MukB PF04310.12 CTQ30701.1 - 0.0025 17.7 0.1 0.084 12.7 0.0 2.2 1 1 1 2 2 2 1 MukB N-terminal AAA_14 PF13173.6 CTQ30701.1 - 0.0042 17.1 0.0 0.15 12.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 CTQ30701.1 - 0.0064 15.3 0.1 0.92 8.2 0.0 2.1 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_25 PF13481.6 CTQ30701.1 - 0.0073 15.9 2.1 0.031 13.9 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CTQ30701.1 - 0.009 16.3 0.3 0.035 14.4 0.3 1.9 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 CTQ30701.1 - 0.0097 15.8 0.2 0.022 14.7 0.1 1.5 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_27 PF13514.6 CTQ30701.1 - 0.016 14.8 0.5 0.08 12.5 0.0 2.1 3 0 0 3 3 3 0 AAA domain AAA_5 PF07728.14 CTQ30701.1 - 0.019 15.0 0.3 0.16 12.0 0.0 2.2 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 CTQ30701.1 - 0.021 14.2 0.0 0.035 13.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI SbcCD_C PF13558.6 CTQ30701.1 - 0.086 13.1 0.1 1.1 9.5 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ATPase_2 PF01637.18 CTQ30701.1 - 0.11 12.3 0.0 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea FecCD PF01032.18 CTQ30702.1 - 2e-95 319.4 24.0 2.5e-95 319.1 24.0 1.1 1 0 0 1 1 1 1 FecCD transport family FecCD PF01032.18 CTQ30703.1 - 1.3e-84 283.9 29.1 1.5e-84 283.7 29.1 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 CTQ30703.1 - 6.4e-08 32.4 12.6 6.4e-08 32.4 12.6 1.9 1 1 1 2 2 2 1 ABC 3 transport family Peripla_BP_2 PF01497.18 CTQ30704.1 - 8.8e-30 104.0 0.3 1e-29 103.8 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein DUF1151 PF06625.11 CTQ30704.1 - 0.052 13.5 0.0 0.09 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1151) TonB_dep_Rec PF00593.24 CTQ30705.1 - 5.8e-48 164.9 38.0 5.8e-48 164.9 38.0 1.4 1 1 0 1 1 1 1 TonB dependent receptor Plug PF07715.15 CTQ30705.1 - 9.5e-20 71.2 0.4 3.1e-19 69.5 0.4 2.0 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain OMP_b-brl_3 PF14905.6 CTQ30705.1 - 2.9e-10 39.7 11.8 4.7e-10 39.0 8.7 2.4 2 1 0 2 2 2 1 Outer membrane protein beta-barrel family STN PF07660.14 CTQ30705.1 - 4.2e-10 39.3 0.0 1.3e-09 37.7 0.0 1.9 1 0 0 1 1 1 1 Secretin and TonB N terminus short domain FecR PF04773.13 CTQ30706.1 - 6.3e-17 62.0 0.7 9.7e-17 61.4 0.7 1.3 1 0 0 1 1 1 1 FecR protein DUF4880 PF16220.5 CTQ30706.1 - 5.6e-09 35.7 11.5 5.6e-09 35.7 11.5 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4880) DUF4974 PF16344.5 CTQ30706.1 - 1e-05 25.4 0.0 2e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4974) DUF2570 PF10828.8 CTQ30706.1 - 0.22 11.3 0.0 0.22 11.3 0.0 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2570) Sigma70_r4_2 PF08281.12 CTQ30707.1 - 1.7e-15 56.5 0.3 3.7e-15 55.3 0.0 1.7 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 CTQ30707.1 - 6.9e-13 48.2 0.1 1.1e-12 47.5 0.1 1.3 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 CTQ30707.1 - 1.2e-08 34.3 0.0 2.6e-08 33.3 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 CTQ30707.1 - 1.1e-05 25.5 0.1 2.3e-05 24.3 0.1 1.6 1 1 0 1 1 1 1 ECF sigma factor HTH_23 PF13384.6 CTQ30707.1 - 0.00017 21.3 0.0 0.00042 20.0 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_24 PF13412.6 CTQ30707.1 - 0.00028 20.4 0.0 0.00052 19.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PCI PF01399.27 CTQ30707.1 - 0.0045 17.5 0.0 0.0076 16.7 0.0 1.4 1 0 0 1 1 1 1 PCI domain HTH_11 PF08279.12 CTQ30707.1 - 0.0074 16.2 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_36 PF13730.6 CTQ30707.1 - 0.0091 15.9 0.0 0.02 14.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 CTQ30707.1 - 0.013 15.6 0.0 0.029 14.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain GerE PF00196.19 CTQ30707.1 - 0.016 14.7 0.0 0.038 13.5 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_Tnp_4 PF13613.6 CTQ30707.1 - 0.017 14.9 0.0 0.035 13.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_40 PF14493.6 CTQ30707.1 - 0.018 15.5 0.0 0.05 14.1 0.0 1.7 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_3 PF01381.22 CTQ30707.1 - 0.022 14.8 0.1 0.054 13.6 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix HTH_Mga PF08280.11 CTQ30707.1 - 0.023 14.7 0.0 0.046 13.8 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain MarR_2 PF12802.7 CTQ30707.1 - 0.032 14.1 0.0 0.076 12.9 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_7 PF02796.15 CTQ30707.1 - 0.038 14.1 0.1 0.19 11.9 0.0 2.2 3 0 0 3 3 2 0 Helix-turn-helix domain of resolvase HTH_38 PF13936.6 CTQ30707.1 - 0.043 13.6 0.0 0.13 12.1 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain TnsD PF15978.5 CTQ30707.1 - 0.054 12.5 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_IclR PF09339.10 CTQ30707.1 - 0.08 12.8 0.1 0.21 11.4 0.0 1.8 2 0 0 2 2 1 0 IclR helix-turn-helix domain HTH_10 PF04967.12 CTQ30707.1 - 0.084 12.7 0.0 0.21 11.4 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain HTH_9 PF08221.11 CTQ30707.1 - 0.11 12.6 0.1 3.3 7.9 0.0 2.3 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_29 PF13551.6 CTQ30707.1 - 0.13 12.3 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix Peripla_BP_5 PF13433.6 CTQ30711.1 - 6.2e-74 249.2 0.0 7.2e-74 248.9 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 CTQ30711.1 - 6.5e-33 114.8 0.0 8.4e-33 114.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 CTQ30711.1 - 0.014 14.5 0.0 0.99 8.4 0.0 2.2 2 0 0 2 2 2 0 Receptor family ligand binding region ANTAR PF03861.14 CTQ30712.1 - 2e-07 30.7 4.0 5.8e-07 29.2 4.0 1.8 1 0 0 1 1 1 1 ANTAR domain Response_reg PF00072.24 CTQ30712.1 - 1.6e-05 25.1 0.1 5.1e-05 23.4 0.0 1.9 3 0 0 3 3 3 1 Response regulator receiver domain TnpV PF14198.6 CTQ30712.1 - 0.077 13.0 0.6 0.12 12.4 0.6 1.4 1 0 0 1 1 1 0 Transposon-encoded protein TnpV BPD_transp_1 PF00528.22 CTQ30713.1 - 3.4e-20 72.6 17.3 3.4e-20 72.6 17.3 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 CTQ30713.1 - 1e-05 25.4 8.4 1.7e-05 24.7 0.2 2.9 2 0 0 2 2 2 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 CTQ30714.1 - 1.1e-40 139.3 15.0 1.1e-40 139.3 15.0 1.4 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 CTQ30715.1 - 5.6e-101 338.2 0.2 6.7e-101 338.0 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle FmdA_AmdA PF03069.15 CTQ30716.1 - 2.5e-58 197.7 0.0 3.1e-37 128.3 0.0 2.0 1 1 1 2 2 2 2 Acetamidase/Formamidase family ABC_tran PF00005.27 CTQ30717.1 - 8.8e-61 204.4 0.0 3.1e-30 105.5 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 CTQ30717.1 - 4.3e-15 56.0 0.7 3e-08 34.1 0.2 2.5 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 CTQ30717.1 - 1.7e-10 40.7 0.1 0.00023 20.6 0.0 2.9 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CTQ30717.1 - 1.6e-09 38.1 4.6 0.0016 18.7 1.1 3.5 2 2 0 2 2 2 2 AAA domain AAA_21 PF13304.6 CTQ30717.1 - 1.6e-07 31.4 2.7 4.8e-05 23.3 0.1 3.5 4 0 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ30717.1 - 4.4e-05 23.2 1.5 0.24 11.2 0.1 3.1 3 0 0 3 3 3 2 P-loop containing region of AAA domain AAA PF00004.29 CTQ30717.1 - 0.0001 22.7 1.5 0.013 15.9 0.0 3.7 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 CTQ30717.1 - 0.00014 21.3 0.1 1.5 8.1 0.0 3.3 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI PRK PF00485.18 CTQ30717.1 - 0.0005 19.9 0.0 0.045 13.5 0.0 2.4 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family ATP-synt_ab PF00006.25 CTQ30717.1 - 0.00058 19.6 0.1 0.76 9.4 0.0 2.4 2 1 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain DUF87 PF01935.17 CTQ30717.1 - 0.00079 19.6 0.2 0.38 10.8 0.0 2.5 2 0 0 2 2 2 1 Helicase HerA, central domain RsgA_GTPase PF03193.16 CTQ30717.1 - 0.001 19.0 0.1 1.5 8.7 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase RNA_helicase PF00910.22 CTQ30717.1 - 0.0014 19.0 0.0 0.15 12.5 0.0 2.5 2 0 0 2 2 2 1 RNA helicase AAA_16 PF13191.6 CTQ30717.1 - 0.0021 18.5 3.9 0.11 12.8 0.1 2.9 2 2 0 2 2 2 1 AAA ATPase domain Sigma54_activat PF00158.26 CTQ30717.1 - 0.0023 17.7 0.1 4 7.1 0.0 3.3 3 0 0 3 3 3 1 Sigma-54 interaction domain AAA_5 PF07728.14 CTQ30717.1 - 0.0055 16.7 0.5 3.8 7.5 0.1 3.4 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 CTQ30717.1 - 0.0066 16.2 0.7 1.3 8.7 0.0 2.7 3 0 0 3 3 3 1 AAA domain AAA_23 PF13476.6 CTQ30717.1 - 0.012 16.1 0.0 0.61 10.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 CTQ30717.1 - 0.014 14.9 0.1 2.6 7.5 0.1 2.6 3 0 0 3 3 2 0 P-loop containing dynein motor region NACHT PF05729.12 CTQ30717.1 - 0.024 14.6 3.3 2.1 8.3 0.1 3.3 4 0 0 4 4 4 0 NACHT domain tRNA_lig_kinase PF08303.11 CTQ30717.1 - 0.025 14.7 0.0 0.12 12.5 0.0 1.9 2 0 0 2 2 2 0 tRNA ligase kinase domain AAA_18 PF13238.6 CTQ30717.1 - 0.033 14.8 0.0 0.5 10.9 0.0 2.4 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 CTQ30717.1 - 0.034 14.1 0.1 0.17 11.8 0.0 2.1 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_19 PF13245.6 CTQ30717.1 - 0.078 13.3 0.3 12 6.2 0.0 2.8 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 CTQ30717.1 - 0.089 12.9 0.0 0.99 9.5 0.0 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase ResIII PF04851.15 CTQ30717.1 - 0.15 12.0 0.1 0.62 10.0 0.0 2.1 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit IstB_IS21 PF01695.17 CTQ30717.1 - 0.19 11.5 1.9 24 4.6 0.0 3.7 4 0 0 4 4 4 0 IstB-like ATP binding protein ATPase PF06745.13 CTQ30717.1 - 0.25 10.6 2.1 10 5.4 0.0 2.8 3 0 0 3 3 3 0 KaiC Hpr_kinase_C PF07475.12 CTQ30717.1 - 0.34 10.4 1.4 3.4 7.1 0.0 2.5 2 0 0 2 2 2 0 HPr Serine kinase C-terminal domain CbiA PF01656.23 CTQ30717.1 - 0.44 10.6 3.0 13 5.8 0.0 3.2 4 0 0 4 4 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain DEAD PF00270.29 CTQ30717.1 - 1.1 8.9 3.3 0.73 9.6 0.5 2.2 2 1 0 2 2 1 0 DEAD/DEAH box helicase Creatininase PF02633.14 CTQ30718.1 - 5.7e-12 45.6 0.0 6e-12 45.5 0.0 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase DUF2913 PF11140.8 CTQ30720.1 - 1.4e-16 60.9 0.4 1.7e-16 60.6 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2913) DDE_Tnp_1_5 PF13737.6 CTQ30722.1 - 3.1e-45 153.1 0.0 1.3e-44 151.1 0.0 2.0 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 CTQ30722.1 - 8.4e-24 84.4 0.8 1.1e-23 84.0 0.8 1.2 1 0 0 1 1 1 1 Transposase DDE domain rve_3 PF13683.6 CTQ30723.1 - 5.7e-32 109.3 0.2 7.3e-32 109.0 0.2 1.2 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 CTQ30723.1 - 2.7e-05 24.3 0.1 3.6e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 Integrase core domain rve PF00665.26 CTQ30723.1 - 0.00012 22.3 0.0 0.002 18.3 0.0 2.1 2 0 0 2 2 2 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 CTQ30723.1 - 0.075 13.3 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 DDE domain Y2_Tnp PF04986.13 CTQ30724.1 - 2.7e-23 83.0 0.0 3e-23 82.8 0.0 1.0 1 0 0 1 1 1 1 Putative transposase Response_reg PF00072.24 CTQ30725.1 - 2.3e-25 88.9 0.3 4.4e-25 88.0 0.3 1.5 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 CTQ30725.1 - 1.4e-18 66.1 0.0 3.9e-18 64.8 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 CTQ30725.1 - 4.5e-05 23.1 0.0 0.00013 21.7 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_38 PF13936.6 CTQ30725.1 - 8e-05 22.3 0.0 0.00026 20.7 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 CTQ30725.1 - 0.00039 20.0 0.0 0.0011 18.6 0.0 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 CTQ30725.1 - 0.00069 19.1 0.0 0.0036 16.8 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 CTQ30725.1 - 0.0086 16.2 0.0 0.034 14.3 0.0 2.1 1 1 0 1 1 1 1 Helix-turn-helix domain Sigma70_ECF PF07638.11 CTQ30725.1 - 0.013 15.4 0.0 0.03 14.2 0.0 1.5 1 1 0 1 1 1 0 ECF sigma factor Sigma70_r4 PF04545.16 CTQ30725.1 - 0.016 14.7 0.0 0.048 13.2 0.0 1.9 1 0 0 1 1 1 0 Sigma-70, region 4 LexA_DNA_bind PF01726.16 CTQ30725.1 - 0.037 13.8 0.0 0.37 10.6 0.0 2.5 1 1 0 1 1 1 0 LexA DNA binding domain MarR_2 PF12802.7 CTQ30725.1 - 0.075 12.9 0.0 0.21 11.5 0.0 1.8 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 CTQ30725.1 - 0.1 12.6 0.0 1.6 8.8 0.0 2.5 2 0 0 2 2 2 0 HTH domain TrmB PF01978.19 CTQ30725.1 - 0.15 12.0 0.0 0.33 10.9 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HATPase_c PF02518.26 CTQ30726.1 - 3.8e-24 85.4 0.1 6.9e-24 84.5 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 CTQ30726.1 - 1.4e-21 76.8 0.0 3.3e-21 75.5 0.0 1.7 1 0 0 1 1 1 1 Response regulator receiver domain HisKA PF00512.25 CTQ30726.1 - 8.2e-15 54.6 0.5 3.8e-14 52.5 0.1 2.5 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 CTQ30726.1 - 0.0056 16.5 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FleQ PF06490.11 CTQ30726.1 - 0.033 14.5 0.0 0.073 13.5 0.0 1.6 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ TssO PF17561.2 CTQ30726.1 - 1.5 8.9 5.3 6.5 6.8 0.9 2.7 1 1 1 2 2 2 0 Type VI secretion system, TssO Peripla_BP_5 PF13433.6 CTQ30728.1 - 2.1e-135 451.4 0.2 2.5e-135 451.1 0.2 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 CTQ30728.1 - 2.2e-75 254.5 0.6 2.2e-75 254.5 0.6 1.3 2 0 0 2 2 2 1 Periplasmic binding protein ANF_receptor PF01094.28 CTQ30728.1 - 1.7e-09 37.2 0.0 2.2e-09 36.9 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region Gag_p30 PF02093.16 CTQ30728.1 - 0.11 12.0 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Gag P30 core shell protein BPD_transp_2 PF02653.16 CTQ30729.1 - 1.2e-45 155.8 35.5 1.4e-45 155.6 35.5 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 CTQ30730.1 - 1.8e-38 132.3 29.3 2.7e-38 131.7 29.3 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 CTQ30731.1 - 2e-29 102.9 0.0 5.5e-29 101.4 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 CTQ30731.1 - 6.3e-08 32.8 0.8 0.00013 21.9 0.3 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30731.1 - 7.5e-08 32.1 0.5 1.8e-06 27.5 0.5 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CTQ30731.1 - 4.1e-07 30.7 0.1 5.8e-07 30.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 CTQ30731.1 - 3.5e-06 27.0 0.3 5.1e-06 26.4 0.3 1.3 1 0 0 1 1 1 1 AAA ATPase domain BCA_ABC_TP_C PF12399.8 CTQ30731.1 - 0.00013 21.8 0.0 0.0003 20.6 0.0 1.7 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter RsgA_GTPase PF03193.16 CTQ30731.1 - 0.00026 20.9 0.0 0.00073 19.5 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 CTQ30731.1 - 0.00034 20.3 0.1 0.00063 19.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 CTQ30731.1 - 0.0015 18.9 0.2 0.0027 18.1 0.2 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CTQ30731.1 - 0.0019 18.5 0.1 0.0093 16.2 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CTQ30731.1 - 0.0049 16.6 0.5 0.16 11.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 CTQ30731.1 - 0.029 14.4 0.1 0.065 13.3 0.1 1.6 1 0 0 1 1 1 0 AAA domain DUF5590 PF17881.1 CTQ30731.1 - 0.031 14.4 0.1 0.061 13.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5590) ATPase_2 PF01637.18 CTQ30731.1 - 0.039 13.9 0.3 0.072 13.0 0.3 1.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_27 PF13514.6 CTQ30731.1 - 0.068 12.8 0.0 0.1 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.6 CTQ30731.1 - 0.079 11.6 0.0 0.099 11.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 CTQ30731.1 - 0.086 12.7 0.1 0.21 11.5 0.0 1.5 1 1 0 1 1 1 0 Rad17 P-loop domain AAA_16 PF13191.6 CTQ30731.1 - 0.097 13.1 0.1 0.23 11.8 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 CTQ30731.1 - 0.17 11.5 0.7 0.28 10.7 0.2 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 CTQ30732.1 - 4e-30 105.1 0.0 5.8e-30 104.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30732.1 - 7.5e-08 32.5 0.3 0.0074 16.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Mg_chelatase PF01078.21 CTQ30732.1 - 2.6e-05 23.7 0.8 0.0031 16.9 0.1 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 CTQ30732.1 - 0.0029 17.6 0.1 0.0046 16.9 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase NACHT PF05729.12 CTQ30732.1 - 0.0049 16.8 0.7 0.014 15.4 0.1 1.9 2 0 0 2 2 2 1 NACHT domain AAA PF00004.29 CTQ30732.1 - 0.0057 17.1 0.2 0.023 15.1 0.2 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 CTQ30732.1 - 0.0064 15.7 0.5 0.011 14.9 0.1 1.5 2 0 0 2 2 2 1 NB-ARC domain AAA_22 PF13401.6 CTQ30732.1 - 0.0078 16.5 0.4 0.072 13.4 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CTQ30732.1 - 0.0089 15.8 0.3 0.019 14.7 0.3 1.7 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 CTQ30732.1 - 0.01 15.9 0.2 0.05 13.7 0.1 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase SbcCD_C PF13558.6 CTQ30732.1 - 0.014 15.6 0.0 0.45 10.8 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MobB PF03205.14 CTQ30732.1 - 0.016 15.1 0.1 0.039 13.8 0.1 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SMC_N PF02463.19 CTQ30732.1 - 0.02 14.3 0.2 0.65 9.4 0.1 2.1 1 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 CTQ30732.1 - 0.023 13.5 1.1 1.1 7.9 0.3 2.6 2 1 0 2 2 2 0 Predicted ATPase of the ABC class TsaE PF02367.17 CTQ30732.1 - 0.029 14.4 0.1 0.06 13.4 0.1 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_15 PF13175.6 CTQ30732.1 - 0.033 13.9 0.1 0.094 12.4 0.1 1.6 1 1 0 2 2 2 0 AAA ATPase domain AAA_29 PF13555.6 CTQ30732.1 - 0.037 13.8 0.1 0.071 12.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF3638 PF12340.8 CTQ30732.1 - 0.052 12.9 0.0 0.074 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3638) AAA_23 PF13476.6 CTQ30732.1 - 0.054 14.0 0.1 0.11 13.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 CTQ30732.1 - 0.066 12.7 0.1 0.1 12.1 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_25 PF13481.6 CTQ30732.1 - 0.069 12.7 0.1 0.19 11.3 0.1 1.7 2 0 0 2 2 2 0 AAA domain TrbI_Ftype PF09677.10 CTQ30732.1 - 0.071 13.4 0.9 0.78 10.1 0.1 2.2 1 1 1 2 2 2 0 Type-F conjugative transfer system protein (TrbI_Ftype) MukB PF04310.12 CTQ30732.1 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 MukB N-terminal AAA_14 PF13173.6 CTQ30732.1 - 0.076 13.1 0.1 1.4 9.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 CTQ30732.1 - 0.079 12.4 0.1 13 5.2 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein AAA_16 PF13191.6 CTQ30732.1 - 0.1 13.0 0.1 0.23 11.8 0.1 1.6 1 0 0 1 1 1 0 AAA ATPase domain SRP54 PF00448.22 CTQ30732.1 - 0.16 11.6 0.8 0.36 10.4 0.2 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_33 PF13671.6 CTQ30732.1 - 0.2 11.8 0.1 0.37 11.0 0.1 1.8 1 1 0 1 1 1 0 AAA domain CN_hydrolase PF00795.22 CTQ30733.1 - 7.3e-31 107.5 0.0 8.7e-31 107.2 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Amidohydro_2 PF04909.14 CTQ30733.1 - 0.11 12.3 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase DDE_Tnp_IS1 PF03400.13 CTQ30734.1 - 3.8e-51 172.8 0.5 4.2e-51 172.7 0.5 1.0 1 0 0 1 1 1 1 IS1 transposase HTH_Tnp_IS1 PF12759.7 CTQ30735.1 - 7.4e-31 105.5 0.2 1.2e-30 104.9 0.2 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 CTQ30735.1 - 2.6e-19 68.6 6.0 6.1e-19 67.5 6.0 1.6 1 0 0 1 1 1 1 InsA N-terminal domain FdhE PF04216.12 CTQ30735.1 - 0.0021 18.0 1.5 0.0025 17.8 1.5 1.1 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation zinc_ribbon_4 PF13717.6 CTQ30735.1 - 0.0029 17.5 3.3 0.0068 16.3 3.1 1.7 1 1 1 2 2 2 2 zinc-ribbon domain zinc_ribbon_10 PF10058.9 CTQ30735.1 - 0.0095 15.7 0.8 0.015 15.0 0.8 1.3 1 0 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein HTH_23 PF13384.6 CTQ30735.1 - 0.013 15.3 0.0 0.023 14.5 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 CTQ30735.1 - 0.018 15.2 0.0 0.035 14.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Zn_Tnp_IS1595 PF12760.7 CTQ30735.1 - 0.025 14.5 1.7 0.047 13.7 1.7 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Elf1 PF05129.13 CTQ30735.1 - 0.045 13.8 0.1 0.055 13.5 0.1 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zf-Dof PF02701.15 CTQ30735.1 - 0.12 12.6 4.5 0.25 11.5 4.3 1.7 1 1 0 1 1 1 0 Dof domain, zinc finger zf-ISL3 PF14690.6 CTQ30735.1 - 0.22 12.2 5.7 1.8 9.3 0.3 2.6 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 HTH_Tnp_1 PF01527.20 CTQ30736.1 - 7.3e-07 29.4 0.0 8.7e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Transposase Epsilon_antitox PF08998.11 CTQ30736.1 - 0.0075 16.5 0.0 0.0094 16.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial epsilon antitoxin HTH_Tnp_ISL3 PF13542.6 CTQ30736.1 - 0.05 13.0 0.0 0.085 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_17 PF12728.7 CTQ30738.1 - 4.7e-18 65.1 0.0 6.2e-18 64.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain AbiEi_4 PF13338.6 CTQ30738.1 - 0.0027 17.8 0.1 0.006 16.7 0.1 1.7 1 1 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin HSP20 PF00011.21 CTQ30739.1 - 1.6e-29 102.1 0.9 2.1e-29 101.7 0.9 1.2 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 CTQ30739.1 - 3.3e-11 42.6 0.0 5.5e-11 41.9 0.0 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA DUF4747 PF15931.5 CTQ30739.1 - 0.063 12.9 0.2 0.097 12.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4747) AAA_2 PF07724.14 CTQ30740.1 - 5.4e-56 189.4 0.2 1.1e-51 175.3 0.0 2.8 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 CTQ30740.1 - 1.1e-32 112.0 3.8 2.9e-32 110.7 3.8 1.8 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 CTQ30740.1 - 8.8e-28 97.4 0.0 2.8e-15 56.9 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Clp_N PF02861.20 CTQ30740.1 - 2.1e-26 91.8 2.2 2.1e-15 56.6 0.0 2.8 2 0 0 2 2 2 2 Clp amino terminal domain, pathogenicity island component ClpB_D2-small PF10431.9 CTQ30740.1 - 2e-21 75.8 0.0 9.3e-21 73.7 0.0 2.3 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 CTQ30740.1 - 2.7e-17 63.1 0.2 1.2e-10 41.5 0.0 3.1 2 1 0 2 2 2 2 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 CTQ30740.1 - 5.8e-11 42.4 0.1 2.3e-07 30.6 0.0 3.1 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_16 PF13191.6 CTQ30740.1 - 8.6e-10 39.3 11.4 0.00045 20.6 0.1 5.1 4 2 0 5 5 5 2 AAA ATPase domain AAA_22 PF13401.6 CTQ30740.1 - 3.3e-08 33.9 0.3 0.033 14.5 0.0 3.8 2 2 0 2 2 2 2 AAA domain TniB PF05621.11 CTQ30740.1 - 8.7e-08 31.8 0.0 3.8e-05 23.2 0.0 3.5 2 1 0 2 2 2 1 Bacterial TniB protein AAA_7 PF12775.7 CTQ30740.1 - 5e-07 29.4 0.0 0.042 13.4 0.0 2.6 2 0 0 2 2 2 2 P-loop containing dynein motor region IstB_IS21 PF01695.17 CTQ30740.1 - 6.4e-07 29.3 0.0 0.02 14.6 0.0 2.9 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_18 PF13238.6 CTQ30740.1 - 8.1e-07 29.7 0.1 0.076 13.6 0.0 3.0 2 0 0 2 2 2 2 AAA domain RuvB_N PF05496.12 CTQ30740.1 - 1.5e-06 28.0 0.5 0.23 11.2 0.0 4.4 4 0 0 4 4 4 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 CTQ30740.1 - 5.2e-06 26.5 0.0 0.064 13.3 0.0 2.7 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 CTQ30740.1 - 2.7e-05 24.2 0.5 1.5 8.7 0.0 3.7 2 1 1 3 3 3 1 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 CTQ30740.1 - 6.6e-05 22.9 0.0 0.59 10.0 0.0 2.9 2 1 0 3 3 3 2 RsgA GTPase NACHT PF05729.12 CTQ30740.1 - 7.7e-05 22.7 0.0 0.49 10.3 0.0 3.8 4 0 0 4 4 3 1 NACHT domain AAA_33 PF13671.6 CTQ30740.1 - 0.00015 21.9 2.9 2.5 8.2 0.1 5.0 4 1 0 4 4 3 1 AAA domain RNA_helicase PF00910.22 CTQ30740.1 - 0.00019 21.7 0.0 0.82 10.1 0.0 3.3 4 0 0 4 4 3 1 RNA helicase AAA_28 PF13521.6 CTQ30740.1 - 0.00031 21.0 1.1 0.99 9.6 0.0 3.3 3 0 0 3 3 3 2 AAA domain TsaE PF02367.17 CTQ30740.1 - 0.00039 20.4 0.0 0.99 9.4 0.0 2.6 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_3 PF07726.11 CTQ30740.1 - 0.0004 20.3 0.0 0.42 10.5 0.0 3.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Roc PF08477.13 CTQ30740.1 - 0.00073 19.7 0.0 1.1 9.4 0.0 2.5 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase AAA_25 PF13481.6 CTQ30740.1 - 0.00078 19.1 0.1 0.1 12.2 0.0 2.8 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 CTQ30740.1 - 0.00078 18.7 1.6 0.35 10.0 0.0 3.1 3 0 0 3 3 3 1 Protein of unknown function (DUF815) Mg_chelatase PF01078.21 CTQ30740.1 - 0.0011 18.4 0.0 3.4 7.0 0.0 3.2 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 CTQ30740.1 - 0.0013 18.1 0.4 0.57 9.4 0.0 3.2 3 0 0 3 3 3 1 Zeta toxin TIP49 PF06068.13 CTQ30740.1 - 0.0016 17.7 2.1 0.18 11.0 0.0 3.3 4 0 0 4 4 3 1 TIP49 P-loop domain AAA_23 PF13476.6 CTQ30740.1 - 0.0027 18.2 2.7 1 9.8 0.0 3.3 2 1 0 2 2 2 1 AAA domain ResIII PF04851.15 CTQ30740.1 - 0.0034 17.4 0.0 2.1 8.4 0.0 3.4 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit ABC_tran PF00005.27 CTQ30740.1 - 0.0034 17.9 0.0 1.3 9.5 0.0 2.9 2 0 0 2 2 2 1 ABC transporter ABC_tran_CTD PF16326.5 CTQ30740.1 - 0.008 16.4 6.2 0.019 15.2 4.3 2.8 2 0 0 2 2 1 1 ABC transporter C-terminal domain DNA_pol3_delta2 PF13177.6 CTQ30740.1 - 0.013 15.3 0.0 1.2 8.9 0.0 2.5 2 0 0 2 2 2 0 DNA polymerase III, delta subunit Torsin PF06309.11 CTQ30740.1 - 0.015 15.4 0.0 0.06 13.5 0.0 1.9 2 0 0 2 2 1 0 Torsin AAA_24 PF13479.6 CTQ30740.1 - 0.024 14.4 0.0 8.4 6.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 CTQ30740.1 - 0.025 14.9 2.6 0.58 10.5 0.6 3.5 1 1 1 2 2 2 0 AAA domain AAA_29 PF13555.6 CTQ30740.1 - 0.028 14.1 0.0 7.4 6.4 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain Bac_DnaA PF00308.18 CTQ30740.1 - 0.05 13.4 0.0 11 5.8 0.0 2.6 2 0 0 2 2 2 0 Bacterial dnaA protein NTPase_1 PF03266.15 CTQ30740.1 - 0.067 13.1 0.5 14 5.6 0.1 3.3 2 1 0 3 3 3 0 NTPase DUF87 PF01935.17 CTQ30740.1 - 0.071 13.2 0.6 0.76 9.8 0.0 2.9 3 1 0 3 3 3 0 Helicase HerA, central domain CHD5 PF04420.14 CTQ30740.1 - 0.84 9.5 1.8 1.6 8.6 1.8 1.4 1 0 0 1 1 1 0 CHD5-like protein HlyE PF06109.13 CTQ30741.1 - 0.34 10.2 1.3 0.4 9.9 0.5 1.5 1 1 1 2 2 2 0 Haemolysin E (HlyE) PsiE PF06146.12 CTQ30742.1 - 4.6e-17 62.2 3.4 4.6e-17 62.2 3.4 2.3 2 0 0 2 2 2 1 Phosphate-starvation-inducible E GGDEF PF00990.21 CTQ30742.1 - 0.00012 21.8 0.0 0.0002 21.2 0.0 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain DUF2339 PF10101.9 CTQ30742.1 - 0.013 14.1 3.1 0.018 13.6 3.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2339) RseC_MucC PF04246.12 CTQ30742.1 - 8.5 6.3 7.0 22 5.0 0.0 2.3 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Peptidase_M48 PF01435.18 CTQ30743.1 - 7.8e-31 107.4 0.0 1.1e-30 106.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 SprT-like PF10263.9 CTQ30743.1 - 0.00056 19.7 0.0 0.00082 19.2 0.0 1.4 1 0 0 1 1 1 1 SprT-like family SLATT_1 PF18181.1 CTQ30743.1 - 0.083 12.8 4.6 0.5 10.3 0.5 2.4 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 Peptidase_M56 PF05569.11 CTQ30743.1 - 0.13 11.4 0.0 0.21 10.7 0.0 1.2 1 0 0 1 1 1 0 BlaR1 peptidase M56 TPR_MLP1_2 PF07926.12 CTQ30744.1 - 0.017 15.2 0.6 0.02 14.9 0.6 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Syntaxin PF00804.25 CTQ30744.1 - 0.018 14.7 0.5 0.021 14.5 0.5 1.1 1 0 0 1 1 1 0 Syntaxin Endotoxin_N PF03945.14 CTQ30744.1 - 0.084 12.6 0.1 0.091 12.5 0.1 1.1 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain Gluconate_2-dh3 PF13618.6 CTQ30744.1 - 0.12 12.6 0.3 0.39 10.9 0.3 1.8 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 rve PF00665.26 CTQ30745.1 - 1.3e-19 70.5 0.0 4.3e-19 68.9 0.0 1.8 1 1 1 2 2 2 1 Integrase core domain rve_2 PF13333.6 CTQ30745.1 - 5.6e-13 48.9 0.1 5.6e-13 48.9 0.1 1.8 2 0 0 2 2 2 1 Integrase core domain HTH_21 PF13276.6 CTQ30745.1 - 1.1e-12 47.9 4.8 2.2e-12 46.9 4.8 1.4 1 0 0 1 1 1 1 HTH-like domain rve_3 PF13683.6 CTQ30745.1 - 5.8e-08 32.4 0.0 3.9e-07 29.8 0.0 2.3 2 0 0 2 2 2 1 Integrase core domain Acetyltransf_10 PF13673.7 CTQ30746.1 - 4.4e-09 36.4 0.1 1.2e-08 34.9 0.1 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ30746.1 - 7e-07 29.6 0.0 1e-06 29.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ30746.1 - 3.2e-05 24.1 0.0 4.2e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Antimicrobial_7 PF08102.11 CTQ30746.1 - 0.073 13.3 0.0 0.35 11.1 0.0 2.0 2 0 0 2 2 2 0 Scorpion antimicrobial peptide DUF1778 PF08681.11 CTQ30747.1 - 7.2e-25 86.7 1.9 7.8e-25 86.6 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1778) WD40_alt PF14077.6 CTQ30748.1 - 0.18 11.7 0.0 0.34 10.8 0.0 1.6 1 1 0 1 1 1 0 Alternative WD40 repeat motif HHA PF05321.11 CTQ30751.1 - 2.2e-28 98.3 0.2 2.5e-28 98.2 0.2 1.0 1 0 0 1 1 1 1 Haemolysin expression modulating protein EZH2_N PF18601.1 CTQ30752.1 - 0.031 14.6 0.3 0.91 9.9 0.0 2.2 1 1 1 2 2 2 0 EZH2 N-terminal domain COX8 PF02285.15 CTQ30752.1 - 0.73 9.8 3.3 1.8 8.5 3.3 1.7 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII Ni_hydr_CYTB PF01292.20 CTQ30752.1 - 3.5 7.2 11.5 0.4 10.3 5.1 2.1 1 1 0 2 2 2 0 Prokaryotic cytochrome b561 PaaX PF07848.12 CTQ30754.1 - 0.043 14.0 0.1 0.12 12.6 0.0 1.9 2 0 0 2 2 2 0 PaaX-like protein NodS PF05401.11 CTQ30754.1 - 0.12 12.0 0.0 0.4 10.3 0.0 1.7 2 0 0 2 2 2 0 Nodulation protein S (NodS) HTH_5 PF01022.20 CTQ30756.1 - 1.2e-15 57.1 0.7 1.8e-15 56.5 0.7 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 CTQ30756.1 - 1.7e-08 34.3 0.2 3e-08 33.6 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 CTQ30756.1 - 0.046 13.7 0.0 0.13 12.2 0.0 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain KilA-N PF04383.13 CTQ30756.1 - 0.16 11.9 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 KilA-N domain ArsD PF06953.11 CTQ30757.1 - 7.5e-47 158.7 0.0 8.3e-47 158.6 0.0 1.0 1 0 0 1 1 1 1 Arsenical resistance operon trans-acting repressor ArsD Thioredoxin_3 PF13192.6 CTQ30757.1 - 0.016 15.3 0.0 0.021 14.9 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin domain ArsA_ATPase PF02374.15 CTQ30758.1 - 9.6e-100 333.7 0.0 2.8e-56 191.0 0.0 4.0 2 2 1 3 3 3 3 Anion-transporting ATPase CbiA PF01656.23 CTQ30758.1 - 4.9e-21 75.1 0.0 5.2e-10 39.5 0.0 2.5 2 1 0 2 2 2 2 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 CTQ30758.1 - 8.4e-19 68.2 0.0 3.5e-10 40.1 0.0 2.7 2 1 0 2 2 2 2 AAA domain ParA PF10609.9 CTQ30758.1 - 1.4e-12 47.6 0.5 3.3e-05 23.5 0.1 2.6 2 0 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 CTQ30758.1 - 1.2e-11 44.6 0.3 2e-05 24.2 0.0 2.6 3 0 0 3 3 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_16 PF13191.6 CTQ30758.1 - 6.6e-08 33.1 2.4 0.0014 19.0 0.1 3.3 3 1 0 3 3 3 2 AAA ATPase domain AAA_25 PF13481.6 CTQ30758.1 - 8.7e-08 32.0 1.5 0.00054 19.6 0.3 2.9 2 1 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 CTQ30758.1 - 8.9e-08 32.1 0.2 0.0071 16.1 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein CBP_BcsQ PF06564.12 CTQ30758.1 - 1e-07 31.7 0.3 0.0018 17.8 0.0 2.9 3 0 0 3 3 3 2 Cellulose biosynthesis protein BcsQ SRP54 PF00448.22 CTQ30758.1 - 1.1e-07 31.7 2.3 0.0022 17.7 0.0 3.2 4 0 0 4 4 3 2 SRP54-type protein, GTPase domain PhoH PF02562.16 CTQ30758.1 - 6.8e-07 28.9 0.4 0.029 13.8 0.1 2.9 2 1 0 2 2 2 2 PhoH-like protein MeaB PF03308.16 CTQ30758.1 - 3e-06 26.4 0.3 0.0067 15.4 0.0 2.4 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB RuvB_N PF05496.12 CTQ30758.1 - 7.3e-06 25.8 0.2 0.00014 21.6 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_30 PF13604.6 CTQ30758.1 - 2.9e-05 23.9 0.1 0.014 15.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.20 CTQ30758.1 - 6e-05 23.0 0.1 0.19 11.6 0.0 2.4 2 0 0 2 2 2 2 Adenylylsulphate kinase NB-ARC PF00931.22 CTQ30758.1 - 0.00011 21.5 0.1 0.019 14.2 0.0 2.3 2 0 0 2 2 2 1 NB-ARC domain ATP_bind_1 PF03029.17 CTQ30758.1 - 0.00041 20.2 2.0 0.75 9.5 0.1 2.9 3 0 0 3 3 3 2 Conserved hypothetical ATP binding protein Thymidylate_kin PF02223.17 CTQ30758.1 - 0.00072 19.3 0.3 0.66 9.6 0.0 3.0 3 1 0 4 4 3 1 Thymidylate kinase AAA_18 PF13238.6 CTQ30758.1 - 0.0015 19.0 0.1 0.13 12.8 0.0 2.8 3 0 0 3 3 2 1 AAA domain AAA PF00004.29 CTQ30758.1 - 0.0016 18.9 0.1 0.11 12.9 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 CTQ30758.1 - 0.0024 17.8 2.1 0.65 9.9 0.1 3.1 3 0 0 3 3 3 1 NTPase MipZ PF09140.11 CTQ30758.1 - 0.0029 16.9 3.4 0.47 9.7 0.2 3.0 4 0 0 4 4 3 1 ATPase MipZ AAA_24 PF13479.6 CTQ30758.1 - 0.0045 16.7 0.0 0.76 9.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CTQ30758.1 - 0.0066 16.7 0.2 0.15 12.3 0.1 2.9 3 1 0 3 3 2 1 AAA domain PIF1 PF05970.14 CTQ30758.1 - 0.0067 15.6 0.1 2.6 7.1 0.0 2.6 3 0 0 3 3 3 1 PIF1-like helicase AAA_33 PF13671.6 CTQ30758.1 - 0.0067 16.6 0.2 0.13 12.4 0.1 2.6 2 1 0 2 2 2 1 AAA domain NACHT PF05729.12 CTQ30758.1 - 0.013 15.4 3.9 0.15 12.0 0.5 3.3 3 1 0 3 3 3 0 NACHT domain ABC_tran PF00005.27 CTQ30758.1 - 0.014 15.9 0.0 0.67 10.5 0.0 2.7 3 0 0 3 3 2 0 ABC transporter RsgA_GTPase PF03193.16 CTQ30758.1 - 0.017 15.0 0.2 1.1 9.1 0.0 2.5 2 0 0 2 2 2 0 RsgA GTPase AAA_29 PF13555.6 CTQ30758.1 - 0.019 14.7 0.4 1.4 8.7 0.2 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain ResIII PF04851.15 CTQ30758.1 - 0.023 14.7 0.0 9.4 6.2 0.0 2.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_7 PF12775.7 CTQ30758.1 - 0.024 14.1 0.1 1 8.8 0.0 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region VirC1 PF07015.11 CTQ30758.1 - 0.034 13.5 0.7 3 7.1 0.0 2.3 2 0 0 2 2 2 0 VirC1 protein RNA_helicase PF00910.22 CTQ30758.1 - 0.058 13.8 0.1 1.8 9.0 0.0 2.4 2 0 0 2 2 2 0 RNA helicase Mg_chelatase PF01078.21 CTQ30758.1 - 0.068 12.5 0.5 0.47 9.8 0.1 2.5 3 0 0 3 3 2 0 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 CTQ30758.1 - 0.075 13.0 0.0 1.1 9.2 0.0 2.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) TsaE PF02367.17 CTQ30758.1 - 0.075 13.0 0.2 1.2 9.2 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Helicase_RecD PF05127.14 CTQ30758.1 - 0.081 12.8 0.1 8.2 6.2 0.0 2.5 2 0 0 2 2 2 0 Helicase AAA_23 PF13476.6 CTQ30758.1 - 0.1 13.1 0.0 2 8.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain KTI12 PF08433.10 CTQ30758.1 - 0.11 11.9 0.1 3.1 7.1 0.0 2.2 2 0 0 2 2 2 0 Chromatin associated protein KTI12 Zeta_toxin PF06414.12 CTQ30758.1 - 0.11 11.7 0.1 7.3 5.8 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin Sigma54_activat PF00158.26 CTQ30758.1 - 0.13 12.0 0.0 8.5 6.0 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain Gtr1_RagA PF04670.12 CTQ30758.1 - 0.14 11.5 0.3 2.1 7.6 0.1 2.7 3 0 0 3 3 3 0 Gtr1/RagA G protein conserved region LpxK PF02606.14 CTQ30758.1 - 0.14 11.2 2.1 8.1 5.4 0.2 2.2 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase DnaB_C PF03796.15 CTQ30758.1 - 0.14 11.4 0.0 4.7 6.5 0.0 2.3 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain Roc PF08477.13 CTQ30758.1 - 0.23 11.7 0.9 6.3 7.0 0.1 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ATPase PF06745.13 CTQ30758.1 - 0.25 10.7 1.3 12 5.2 0.1 2.5 2 1 0 2 2 2 0 KaiC PduV-EutP PF10662.9 CTQ30758.1 - 0.72 9.6 1.8 1.4 8.7 0.1 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation CobA_CobO_BtuR PF02572.15 CTQ30758.1 - 1 9.6 5.8 6.4 7.0 0.1 3.4 3 1 1 4 4 3 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ArsB PF02040.15 CTQ30759.1 - 1e-158 529.1 37.6 1.2e-158 528.9 37.6 1.0 1 0 0 1 1 1 1 Arsenical pump membrane protein CitMHS PF03600.16 CTQ30759.1 - 1e-23 84.0 48.3 1e-23 84.0 48.3 2.0 1 1 1 2 2 2 1 Citrate transporter Na_sulph_symp PF00939.19 CTQ30759.1 - 0.0042 16.2 40.0 0.068 12.2 21.3 2.7 1 1 1 2 2 2 2 Sodium:sulfate symporter transmembrane region ArsC PF03960.15 CTQ30760.1 - 4.2e-20 71.5 0.0 7.3e-20 70.7 0.0 1.4 1 1 0 1 1 1 1 ArsC family PGM_PMM_IV PF00408.20 CTQ30760.1 - 0.014 15.6 0.5 0.21 11.8 0.0 2.3 2 1 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, C-terminal domain Glutaredoxin PF00462.24 CTQ30760.1 - 0.019 15.2 0.0 0.26 11.5 0.0 2.2 1 1 1 2 2 2 0 Glutaredoxin Acetyltransf_4 PF13420.7 CTQ30761.1 - 4.6e-17 62.6 0.0 5.2e-17 62.4 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ30761.1 - 1.7e-16 60.5 0.1 2.2e-16 60.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 CTQ30761.1 - 1.4e-10 42.0 0.0 1.6e-10 41.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ30761.1 - 2.3e-08 34.3 0.1 3.8e-08 33.6 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ30761.1 - 2.5e-08 33.9 0.0 4e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 CTQ30761.1 - 0.00022 21.4 0.2 0.00031 20.9 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ30761.1 - 0.00051 20.1 0.0 0.00094 19.3 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Trp_halogenase PF04820.14 CTQ30761.1 - 0.099 11.5 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Tryptophan halogenase DUF1194 PF06707.11 CTQ30761.1 - 0.11 11.7 0.0 3.8 6.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1194) ArsA_ATPase PF02374.15 CTQ30762.1 - 2e-22 79.7 0.0 3e-12 46.3 0.0 2.0 1 1 1 2 2 2 2 Anion-transporting ATPase ArsA_ATPase PF02374.15 CTQ30763.1 - 9e-67 225.4 0.2 2.7e-52 177.8 0.0 3.1 2 1 0 2 2 2 2 Anion-transporting ATPase AAA_31 PF13614.6 CTQ30763.1 - 3.5e-21 75.9 0.0 6.6e-12 45.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain CbiA PF01656.23 CTQ30763.1 - 2.4e-20 72.9 0.0 4e-09 36.6 0.0 2.4 2 1 0 2 2 2 2 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 CTQ30763.1 - 1.9e-12 47.2 0.5 3.9e-06 26.5 0.2 2.5 2 0 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 CTQ30763.1 - 1.2e-09 38.1 0.1 0.0014 18.2 0.0 2.3 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_16 PF13191.6 CTQ30763.1 - 1.6e-08 35.1 0.1 0.0022 18.4 0.0 3.2 3 0 0 3 3 3 2 AAA ATPase domain AAA_25 PF13481.6 CTQ30763.1 - 1.6e-08 34.4 6.9 0.00011 21.9 0.5 3.3 2 1 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 CTQ30763.1 - 6.1e-08 32.6 0.3 0.0053 16.5 0.0 2.6 2 0 0 2 2 2 2 IstB-like ATP binding protein SRP54 PF00448.22 CTQ30763.1 - 6.9e-08 32.3 2.4 0.0041 16.8 0.5 3.2 3 0 0 3 3 3 2 SRP54-type protein, GTPase domain MeaB PF03308.16 CTQ30763.1 - 2e-07 30.3 3.3 0.00051 19.1 0.8 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB PhoH PF02562.16 CTQ30763.1 - 2.5e-07 30.3 3.0 0.003 17.0 0.0 2.8 3 1 0 3 3 3 2 PhoH-like protein CBP_BcsQ PF06564.12 CTQ30763.1 - 4.6e-07 29.5 0.5 0.0018 17.8 0.0 2.4 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ APS_kinase PF01583.20 CTQ30763.1 - 4.7e-06 26.6 0.1 0.022 14.6 0.0 2.3 2 0 0 2 2 2 2 Adenylylsulphate kinase MipZ PF09140.11 CTQ30763.1 - 6.3e-06 25.7 1.4 0.0012 18.2 0.1 3.0 3 0 0 3 3 3 1 ATPase MipZ VirC1 PF07015.11 CTQ30763.1 - 0.00013 21.3 0.7 0.09 12.1 0.1 2.4 2 0 0 2 2 2 2 VirC1 protein NB-ARC PF00931.22 CTQ30763.1 - 0.0003 20.1 1.0 0.17 11.1 0.2 2.3 2 0 0 2 2 2 2 NB-ARC domain ATP_bind_1 PF03029.17 CTQ30763.1 - 0.00047 20.0 4.9 0.27 11.0 0.1 3.2 4 0 0 4 4 3 2 Conserved hypothetical ATP binding protein NACHT PF05729.12 CTQ30763.1 - 0.0016 18.4 3.4 0.71 9.8 0.5 2.8 2 0 0 2 2 2 2 NACHT domain PIF1 PF05970.14 CTQ30763.1 - 0.0017 17.6 0.1 0.99 8.5 0.0 2.2 2 0 0 2 2 2 2 PIF1-like helicase AAA_33 PF13671.6 CTQ30763.1 - 0.0017 18.5 0.1 0.16 12.1 0.0 2.5 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 CTQ30763.1 - 0.0019 17.9 0.0 0.66 9.6 0.0 2.4 2 0 0 2 2 2 1 Thymidylate kinase AAA_30 PF13604.6 CTQ30763.1 - 0.0024 17.6 5.1 0.031 14.0 0.5 2.6 3 0 0 3 3 3 1 AAA domain AAA PF00004.29 CTQ30763.1 - 0.0025 18.3 2.6 0.36 11.2 0.1 2.6 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 CTQ30763.1 - 0.0039 16.9 1.1 1.8 8.3 0.1 2.9 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 CTQ30763.1 - 0.004 16.5 0.3 0.52 9.6 0.2 2.5 2 0 0 2 2 2 1 Zeta toxin TIP49 PF06068.13 CTQ30763.1 - 0.0056 15.9 0.3 0.058 12.6 0.1 2.0 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_22 PF13401.6 CTQ30763.1 - 0.0075 16.5 0.8 1.9 8.8 0.1 2.7 2 1 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 CTQ30763.1 - 0.012 15.5 2.8 1.6 8.6 0.4 2.6 2 0 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 CTQ30763.1 - 0.019 14.9 0.2 6.1 6.7 0.1 2.6 2 0 0 2 2 2 0 RsgA GTPase Mg_chelatase PF01078.21 CTQ30763.1 - 0.037 13.4 0.1 2.3 7.6 0.1 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 CTQ30763.1 - 0.042 13.6 0.2 15 5.5 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_18 PF13238.6 CTQ30763.1 - 0.044 14.3 2.9 5.5 7.6 0.0 3.0 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 CTQ30763.1 - 0.056 13.9 0.0 3.2 8.3 0.0 2.7 2 1 0 2 2 2 0 ABC transporter AAA_7 PF12775.7 CTQ30763.1 - 0.058 12.9 0.4 0.95 8.9 0.1 2.1 2 0 0 2 2 2 0 P-loop containing dynein motor region RuvB_N PF05496.12 CTQ30763.1 - 0.062 13.1 0.7 5.5 6.7 0.1 2.7 3 0 0 3 3 2 0 Holliday junction DNA helicase RuvB P-loop domain Glyco_trans_4_4 PF13579.6 CTQ30763.1 - 0.079 13.4 0.3 0.079 13.4 0.3 3.1 2 1 0 2 2 1 0 Glycosyl transferase 4-like domain MobB PF03205.14 CTQ30763.1 - 0.089 12.7 0.5 5.9 6.8 0.1 2.5 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Glyco_transf_28 PF03033.20 CTQ30763.1 - 0.1 12.7 0.3 0.9 9.6 0.0 2.5 3 0 0 3 3 3 0 Glycosyltransferase family 28 N-terminal domain Helicase_RecD PF05127.14 CTQ30763.1 - 0.15 11.9 0.4 9.3 6.1 0.0 2.7 3 0 0 3 3 3 0 Helicase RNA_helicase PF00910.22 CTQ30763.1 - 0.21 12.0 0.1 20 5.7 0.0 2.3 2 0 0 2 2 2 0 RNA helicase LpxK PF02606.14 CTQ30763.1 - 0.25 10.4 4.1 5.2 6.1 0.7 2.4 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase CLP1_P PF16575.5 CTQ30763.1 - 0.33 10.7 0.7 23 4.7 0.0 2.6 3 0 0 3 3 3 0 mRNA cleavage and polyadenylation factor CLP1 P-loop ArsD PF06953.11 CTQ30764.1 - 3.2e-31 108.2 0.0 3.7e-31 108.0 0.0 1.0 1 0 0 1 1 1 1 Arsenical resistance operon trans-acting repressor ArsD Thioredoxin_3 PF13192.6 CTQ30764.1 - 7.8e-05 22.7 0.0 0.00016 21.6 0.0 1.8 1 1 0 1 1 1 1 Thioredoxin domain Sigma70_r2 PF04542.14 CTQ30765.1 - 2.2e-13 49.7 2.5 4.1e-13 48.9 2.5 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 CTQ30765.1 - 9.5e-09 34.8 0.1 1.9e-08 33.9 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 CTQ30765.1 - 2.2e-05 23.9 0.6 3.6e-05 23.2 0.6 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Baculo_PEP_N PF04512.12 CTQ30765.1 - 0.08 13.2 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, N terminus FMN_red PF03358.15 CTQ30766.1 - 7.1e-27 94.1 0.0 9.4e-27 93.7 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 CTQ30766.1 - 0.025 14.3 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin-like fold TrbI PF03743.14 CTQ30766.1 - 0.056 13.3 0.0 0.085 12.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial conjugation TrbI-like protein HTH_20 PF12840.7 CTQ30767.1 - 7.7e-12 45.1 0.3 1.2e-11 44.5 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 CTQ30767.1 - 2.8e-05 23.8 0.7 2.8e-05 23.8 0.7 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 CTQ30767.1 - 4.2e-05 23.3 0.4 6.5e-05 22.7 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 CTQ30767.1 - 0.0017 18.2 0.0 0.0024 17.7 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 CTQ30767.1 - 0.011 15.3 0.0 0.019 14.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ30767.1 - 0.031 14.2 0.2 0.052 13.5 0.2 1.4 1 1 0 1 1 1 0 MarR family NinF PF05810.12 CTQ30767.1 - 0.043 13.7 0.2 0.061 13.2 0.2 1.2 1 0 0 1 1 1 0 NinF protein HTH_9 PF08221.11 CTQ30767.1 - 0.062 13.4 0.2 0.11 12.6 0.2 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Acetyltransf_4 PF13420.7 CTQ30768.1 - 3.1e-16 59.9 0.0 3.6e-16 59.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ30768.1 - 3.9e-12 46.4 0.1 4.8e-12 46.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 CTQ30768.1 - 1.1e-08 35.8 0.1 1.4e-08 35.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ30768.1 - 1.1e-07 32.1 0.0 1.9e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ30768.1 - 0.00016 21.6 0.0 0.00023 21.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ30768.1 - 0.038 13.9 0.0 0.061 13.3 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein MIP PF00230.20 CTQ30769.1 - 9.1e-24 84.4 11.4 3.5e-23 82.5 11.4 1.7 1 1 0 1 1 1 1 Major intrinsic protein DUF1576 PF07613.11 CTQ30769.1 - 0.009 15.5 2.1 0.019 14.5 2.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1576) DDE_Tnp_ISL3 PF01610.17 CTQ30770.1 - 1.9e-18 67.1 0.0 3e-18 66.4 0.0 1.3 1 0 0 1 1 1 1 Transposase zf-ISL3 PF14690.6 CTQ30770.1 - 8e-07 29.6 8.1 1.5e-06 28.7 8.1 1.5 1 0 0 1 1 1 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DDE_Tnp_ISL3 PF01610.17 CTQ30771.1 - 1.3e-12 47.9 1.1 1.5e-12 47.8 0.2 1.6 2 0 0 2 2 2 1 Transposase HTH_29 PF13551.6 CTQ30771.1 - 1.9e-06 27.8 0.4 1.8e-05 24.6 0.1 2.5 2 0 0 2 2 2 1 Winged helix-turn helix HTH_17 PF12728.7 CTQ30771.1 - 7.6e-05 22.8 0.0 0.00032 20.8 0.0 2.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 CTQ30771.1 - 0.00031 20.7 0.4 0.00085 19.4 0.4 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Sigma70_r4_2 PF08281.12 CTQ30771.1 - 0.004 16.8 0.0 0.0098 15.5 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 CTQ30771.1 - 0.0077 16.0 0.5 0.0077 16.0 0.5 3.3 4 0 0 4 4 4 1 Homeodomain-like domain Phage_AlpA PF05930.12 CTQ30771.1 - 0.011 15.5 0.0 0.029 14.2 0.0 1.6 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) HTH_28 PF13518.6 CTQ30771.1 - 0.016 15.3 8.5 0.018 15.1 0.3 4.0 4 0 0 4 4 4 0 Helix-turn-helix domain HTH_38 PF13936.6 CTQ30771.1 - 0.016 14.9 0.2 0.038 13.8 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MerR PF00376.23 CTQ30771.1 - 0.018 14.8 1.0 0.041 13.7 0.1 2.1 2 0 0 2 2 2 0 MerR family regulatory protein HTH_IclR PF09339.10 CTQ30771.1 - 0.065 13.1 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain ParE_toxin PF05016.15 CTQ30772.1 - 0.029 15.0 0.0 0.031 14.9 0.0 1.1 1 0 0 1 1 1 0 ParE toxin of type II toxin-antitoxin system, parDE TP53IP5 PF15331.6 CTQ30773.1 - 4.4 7.4 12.6 5.3 7.1 12.6 1.0 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 HATPase_c PF02518.26 CTQ30774.1 - 2.2e-16 60.4 0.0 5.6e-16 59.0 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ30774.1 - 8.5e-10 38.5 0.5 1.9e-09 37.4 0.5 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 CTQ30774.1 - 1.2e-06 28.8 0.1 3.4e-06 27.3 0.1 1.9 1 0 0 1 1 1 1 HAMP domain HATPase_c_5 PF14501.6 CTQ30774.1 - 3.5e-06 26.8 0.0 2.1e-05 24.4 0.0 2.2 3 0 0 3 3 3 1 GHKL domain CBM39 PF15886.5 CTQ30774.1 - 0.043 13.7 0.1 0.1 12.5 0.1 1.6 1 0 0 1 1 1 0 Carbohydrate binding domain (family 32) MIS13 PF08202.11 CTQ30774.1 - 0.36 10.1 2.0 0.24 10.6 0.2 1.5 2 0 0 2 2 2 0 Mis12-Mtw1 protein family Response_reg PF00072.24 CTQ30775.1 - 3.5e-26 91.6 0.0 5.3e-26 91.0 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ30775.1 - 6.7e-25 87.0 0.4 1.7e-24 85.7 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal CopD PF05425.13 CTQ30776.1 - 2.1e-21 76.3 8.4 2.1e-21 76.3 8.4 3.3 2 1 1 3 3 3 1 Copper resistance protein D DUF4149 PF13664.6 CTQ30776.1 - 0.0023 18.2 2.9 0.0023 18.2 2.9 3.2 4 0 0 4 4 4 1 Domain of unknown function (DUF4149) CopC PF04234.12 CTQ30777.1 - 3e-23 82.7 0.1 3.6e-23 82.4 0.1 1.1 1 0 0 1 1 1 1 CopC domain Big_5 PF13205.6 CTQ30777.1 - 1.9e-05 25.3 0.1 2.3e-05 25.1 0.1 1.1 1 0 0 1 1 1 1 Bacterial Ig-like domain DUF2808 PF10989.8 CTQ30777.1 - 0.086 12.8 0.0 0.099 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2808) CopB PF05275.11 CTQ30778.1 - 3.5e-87 291.3 2.6 4.3e-87 291.1 2.6 1.1 1 0 0 1 1 1 1 Copper resistance protein B precursor (CopB) OMP_b-brl PF13505.6 CTQ30778.1 - 0.0026 17.9 0.1 0.0053 16.9 0.1 1.5 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain Cu-oxidase_3 PF07732.15 CTQ30779.1 - 1.6e-49 166.9 2.2 4.7e-40 136.3 0.3 3.3 3 0 0 3 3 3 2 Multicopper oxidase Cu-oxidase PF00394.22 CTQ30779.1 - 3.6e-40 137.7 1.1 6.2e-38 130.4 0.1 3.8 4 1 0 4 4 4 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 CTQ30779.1 - 2.6e-31 108.2 2.7 1.9e-25 89.2 0.5 3.3 2 1 0 2 2 2 2 Multicopper oxidase TAT_signal PF10518.9 CTQ30779.1 - 0.0046 16.7 0.2 0.009 15.8 0.2 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Speriolin_N PF15058.6 CTQ30779.1 - 0.024 14.7 0.0 0.051 13.7 0.0 1.5 1 0 0 1 1 1 0 Speriolin N terminus DapB_C PF05173.14 CTQ30779.1 - 0.12 12.4 0.0 0.28 11.2 0.0 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, C-terminus NUT PF12881.7 CTQ30780.1 - 0.014 13.8 0.4 0.015 13.8 0.4 1.0 1 0 0 1 1 1 0 NUT protein Peptidase_M23 PF01551.22 CTQ30781.1 - 4.9e-26 90.8 0.3 7.2e-26 90.2 0.3 1.3 1 0 0 1 1 1 1 Peptidase family M23 SpoVR PF04293.13 CTQ30781.1 - 0.075 11.7 0.0 0.11 11.2 0.0 1.1 1 0 0 1 1 1 0 SpoVR like protein DUF2933 PF11666.8 CTQ30782.1 - 5.2e-24 84.0 8.5 6.4e-24 83.7 8.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2933) COX6A PF02046.15 CTQ30782.1 - 0.037 14.5 1.8 2 8.9 0.3 2.0 1 1 1 2 2 2 0 Cytochrome c oxidase subunit VIa DUF4148 PF13663.6 CTQ30782.1 - 0.096 12.9 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) E1-E2_ATPase PF00122.20 CTQ30783.1 - 3.8e-58 196.0 0.3 8.6e-58 194.8 0.3 1.6 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 CTQ30783.1 - 9.1e-45 153.5 4.9 1.3e-44 153.0 4.9 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase YHS PF04945.13 CTQ30783.1 - 3.3e-20 71.9 0.5 3.6e-19 68.6 0.1 2.4 2 0 0 2 2 2 1 YHS domain Hydrolase_3 PF08282.12 CTQ30783.1 - 5.5e-07 29.6 1.0 0.00049 19.9 0.3 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 CTQ30783.1 - 9.1e-06 26.2 0.1 2.5e-05 24.8 0.1 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase RibD_C PF01872.17 CTQ30783.1 - 0.0075 16.1 0.1 0.012 15.4 0.1 1.3 1 0 0 1 1 1 1 RibD C-terminal domain Hydrolase_6 PF13344.6 CTQ30783.1 - 0.076 13.1 0.0 0.25 11.5 0.0 2.0 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase MASE3 PF17159.4 CTQ30783.1 - 1.3 8.6 9.6 0.023 14.3 1.5 2.1 3 0 0 3 3 3 0 Membrane-associated sensor domain DUF411 PF04214.13 CTQ30784.1 - 8.7e-24 83.3 1.4 8.7e-24 83.3 1.4 1.9 2 0 0 2 2 2 1 Protein of unknown function, DUF ACR_tran PF00873.19 CTQ30785.1 - 2.1e-238 793.8 2.0 2.6e-238 793.5 2.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 CTQ30785.1 - 6.1e-05 22.1 13.3 0.017 14.0 4.0 2.6 2 0 0 2 2 2 2 MMPL family SecD_SecF PF02355.16 CTQ30785.1 - 0.28 10.5 9.8 1.2 8.5 2.6 2.6 2 0 0 2 2 2 0 Protein export membrane protein WTF PF03303.13 CTQ30785.1 - 0.71 9.6 3.8 0.65 9.7 0.0 2.5 3 0 0 3 3 3 0 WTF protein Wzy_C PF04932.15 CTQ30785.1 - 6.8 6.3 17.5 0.043 13.4 0.6 3.7 3 1 0 3 3 3 0 O-Antigen ligase HlyD_D23 PF16576.5 CTQ30786.1 - 9.8e-63 211.2 0.0 1.3e-62 210.8 0.0 1.2 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_D4 PF16572.5 CTQ30786.1 - 6.4e-23 80.4 0.1 1.3e-21 76.1 0.0 2.4 2 0 0 2 2 2 1 Long alpha hairpin domain of cation efflux system protein, CusB HlyD_3 PF13437.6 CTQ30786.1 - 7.6e-14 52.3 1.8 2.3e-11 44.3 0.1 3.2 4 0 0 4 4 4 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 CTQ30786.1 - 0.0037 17.1 0.1 1.1 9.2 0.0 2.6 2 0 0 2 2 2 2 Biotin-lipoyl like HlyD PF00529.20 CTQ30786.1 - 0.011 15.6 0.4 0.041 13.8 0.0 2.2 3 0 0 3 3 3 0 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 CTQ30786.1 - 0.05 13.4 0.1 13 5.7 0.0 2.8 2 0 0 2 2 2 0 Biotin-requiring enzyme CusF_Ec PF11604.8 CTQ30787.1 - 1.4e-20 73.0 0.1 2.1e-20 72.4 0.1 1.3 1 0 0 1 1 1 1 Copper binding periplasmic protein CusF OEP PF02321.18 CTQ30788.1 - 3.3e-50 170.5 31.6 1e-27 97.1 8.4 2.0 2 0 0 2 2 2 2 Outer membrane efflux protein NPV_P10 PF05531.12 CTQ30788.1 - 0.055 13.9 0.0 1.5 9.3 0.4 2.5 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein TPR_MLP1_2 PF07926.12 CTQ30788.1 - 0.53 10.3 15.5 0.06 13.4 4.0 2.5 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein Response_reg PF00072.24 CTQ30789.1 - 1.3e-26 92.9 0.0 2.1e-26 92.3 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ30789.1 - 3e-25 88.1 0.0 6.3e-25 87.1 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal HATPase_c PF02518.26 CTQ30790.1 - 2.9e-22 79.3 0.0 1e-21 77.5 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ30790.1 - 9.9e-11 41.5 0.5 2.9e-10 40.0 0.5 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 CTQ30790.1 - 2.2e-08 33.9 0.0 4.3e-08 33.0 0.0 1.5 1 0 0 1 1 1 1 GHKL domain HAMP PF00672.25 CTQ30790.1 - 3.9e-07 30.3 0.4 1.1e-06 29.0 0.1 1.9 2 0 0 2 2 2 1 HAMP domain DUF3139 PF11337.8 CTQ30790.1 - 0.011 16.4 0.6 0.79 10.4 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) HATPase_c_2 PF13581.6 CTQ30790.1 - 0.045 13.7 0.0 0.12 12.3 0.0 1.8 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain PspB PF06667.12 CTQ30790.1 - 0.2 11.7 0.1 0.2 11.7 0.1 2.2 2 0 0 2 2 2 0 Phage shock protein B DDE_Tnp_ISL3 PF01610.17 CTQ30792.1 - 7.7e-20 71.6 0.0 8.7e-20 71.5 0.0 1.1 1 0 0 1 1 1 1 Transposase Transposase_mut PF00872.18 CTQ30792.1 - 0.26 10.1 0.0 0.28 10.0 0.0 1.1 1 0 0 1 1 1 0 Transposase, Mutator family MurB_C PF02873.16 CTQ30793.1 - 4.4e-38 130.0 0.0 7e-38 129.4 0.0 1.3 1 0 0 1 1 1 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FAD_binding_4 PF01565.23 CTQ30793.1 - 1.1e-22 80.3 0.1 4.7e-22 78.2 0.1 2.0 2 0 0 2 2 2 1 FAD binding domain DUF498 PF04430.14 CTQ30793.1 - 0.023 14.8 0.1 0.36 10.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF498/DUF598) BPL_LplA_LipB PF03099.19 CTQ30794.1 - 2.5e-23 82.4 0.0 3.7e-23 81.9 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.12 CTQ30794.1 - 7.2e-13 48.3 0.0 1.8e-12 47.0 0.0 1.7 1 0 0 1 1 1 1 HTH domain BPL_C PF02237.17 CTQ30794.1 - 3.3e-11 42.9 0.2 7.2e-11 41.8 0.2 1.6 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain HTH_24 PF13412.6 CTQ30794.1 - 0.0052 16.3 0.1 0.034 13.7 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 CTQ30794.1 - 0.016 15.1 0.0 0.041 13.8 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 CTQ30794.1 - 0.06 13.3 0.0 0.63 10.1 0.0 2.6 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain PRK PF00485.18 CTQ30795.1 - 1.4e-13 51.0 0.0 2.3e-13 50.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 CTQ30795.1 - 0.068 13.7 0.0 0.36 11.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 CTQ30795.1 - 0.075 13.3 0.0 0.18 12.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_31 PF13614.6 CTQ30796.1 - 1.1e-27 97.1 0.0 1.6e-27 96.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 CTQ30796.1 - 3.3e-12 46.6 0.0 4.3e-12 46.2 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 CTQ30796.1 - 5.6e-06 26.0 0.4 0.031 13.7 0.0 2.4 2 0 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase MerR PF00376.23 CTQ30796.1 - 0.00012 21.8 0.0 0.003 17.3 0.0 2.4 2 0 0 2 2 2 1 MerR family regulatory protein ArsA_ATPase PF02374.15 CTQ30796.1 - 0.00035 19.8 0.0 0.023 13.9 0.0 2.2 2 0 0 2 2 2 1 Anion-transporting ATPase VirC1 PF07015.11 CTQ30796.1 - 0.00043 19.7 0.3 0.22 10.8 0.0 2.4 2 1 1 3 3 3 2 VirC1 protein HTH_31 PF13560.6 CTQ30796.1 - 0.0022 18.3 0.1 0.019 15.3 0.0 2.2 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ30796.1 - 0.012 15.6 0.0 0.029 14.4 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix MerR_1 PF13411.6 CTQ30796.1 - 0.017 15.2 0.0 0.046 13.8 0.0 1.7 1 1 0 1 1 1 0 MerR HTH family regulatory protein MipZ PF09140.11 CTQ30796.1 - 0.059 12.7 0.1 3.4 6.9 0.0 2.2 2 0 0 2 2 2 0 ATPase MipZ Phage_Cox PF10743.9 CTQ30796.1 - 0.069 13.2 0.0 0.18 11.9 0.0 1.7 1 0 0 1 1 1 0 Regulatory phage protein cox HTH_17 PF12728.7 CTQ30796.1 - 0.16 12.1 0.0 0.39 10.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain SoPB_HTH PF18090.1 CTQ30797.1 - 6.4e-21 74.3 0.0 1.1e-20 73.5 0.0 1.4 1 0 0 1 1 1 1 Centromere-binding protein HTH domain ParBc PF02195.18 CTQ30797.1 - 5.5e-12 45.8 0.0 1.4e-11 44.5 0.0 1.7 1 0 0 1 1 1 1 ParB-like nuclease domain Peptidase_S74 PF13884.6 CTQ30798.1 - 1.6e-08 34.7 0.0 3.3e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 Chaperone of endosialidase DUF3611 PF12263.8 CTQ30798.1 - 0.095 12.6 0.9 0.18 11.7 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) DUF1983 PF09327.11 CTQ30799.1 - 1.5e-15 57.0 0.9 1.5e-15 57.0 0.9 6.9 6 0 0 6 6 6 1 Domain of unknown function (DUF1983) DUF3672 PF12421.8 CTQ30799.1 - 0.0063 16.4 0.6 0.0063 16.4 0.6 3.2 3 0 0 3 3 3 1 Fibronectin type III protein Y_Y_Y PF07495.13 CTQ30799.1 - 0.15 12.1 0.1 0.46 10.5 0.1 1.8 1 0 0 1 1 1 0 Y_Y_Y domain Nbl1_Borealin_N PF10444.9 CTQ30799.1 - 7.6 6.3 7.0 4.1 7.1 1.1 3.6 4 0 0 4 4 4 0 Nbl1 / Borealin N terminal Lambda_tail_I PF06805.12 CTQ30800.1 - 4.4e-09 36.6 0.0 1.2e-08 35.2 0.0 1.7 2 0 0 2 2 2 1 Bacteriophage lambda tail assembly protein I NLPC_P60 PF00877.19 CTQ30802.1 - 3.5e-21 75.2 0.1 5e-21 74.7 0.1 1.2 1 0 0 1 1 1 1 NlpC/P60 family Prok-JAB PF14464.6 CTQ30802.1 - 9.3e-15 54.4 0.2 1.4e-14 53.9 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain CHAP PF05257.16 CTQ30802.1 - 0.04 14.5 0.4 0.078 13.6 0.4 1.4 1 0 0 1 1 1 0 CHAP domain Phage_tail_L PF05100.12 CTQ30803.1 - 4.6e-79 264.5 0.0 5.2e-79 264.3 0.0 1.0 1 0 0 1 1 1 1 Phage minor tail protein L Phage_min_tail PF05939.13 CTQ30804.1 - 2.3e-37 127.7 0.0 2.5e-37 127.6 0.0 1.0 1 0 0 1 1 1 1 Phage minor tail protein PhageMin_Tail PF10145.9 CTQ30805.1 - 7e-24 84.8 20.5 7e-24 84.8 20.5 5.2 2 1 1 4 4 4 1 Phage-related minor tail protein Phage_HK97_TLTM PF06120.11 CTQ30805.1 - 3.1e-07 29.9 0.7 3.1e-07 29.9 0.7 2.9 2 0 0 2 2 2 1 Tail length tape measure protein Tape_meas_lam_C PF09718.10 CTQ30805.1 - 0.041 14.0 0.4 0.041 14.0 0.4 3.8 4 0 0 4 4 4 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) DUF910 PF06014.11 CTQ30805.1 - 0.085 12.9 1.9 0.12 12.4 0.1 2.3 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF910) F-protein PF00469.20 CTQ30805.1 - 0.18 11.4 4.5 0.63 9.6 4.5 1.9 1 0 0 1 1 1 0 Negative factor, (F-Protein) or Nef Phage_TAC_14 PF16462.5 CTQ30806.1 - 5.2e-33 113.6 0.1 5.8e-33 113.5 0.1 1.0 1 0 0 1 1 1 1 Phage tail assembly chaperone protein, TAC Phage_TTP_13 PF16463.5 CTQ30807.1 - 1.6e-77 257.7 0.1 1.8e-77 257.5 0.1 1.0 1 0 0 1 1 1 1 Phage tail tube protein family Phage_tail_3 PF08813.11 CTQ30807.1 - 9.9e-05 22.0 0.0 0.00028 20.5 0.0 1.6 1 1 1 2 2 2 1 Phage tail tube protein, TTP Fn3-like PF14310.6 CTQ30807.1 - 0.15 12.2 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 Fibronectin type III-like domain HK97-gp10_like PF04883.12 CTQ30808.1 - 4.9e-08 33.8 0.3 1.1e-07 32.7 0.2 1.6 1 1 1 2 2 2 1 Bacteriophage HK97-gp10, putative tail-component Phage_H_T_join PF05521.11 CTQ30810.1 - 4.1e-05 24.0 0.1 4.9e-05 23.8 0.1 1.1 1 0 0 1 1 1 1 Phage head-tail joining protein Phage_connect_1 PF05135.13 CTQ30811.1 - 3.3e-07 30.7 0.1 4.3e-07 30.4 0.1 1.2 1 0 0 1 1 1 1 Phage gp6-like head-tail connector protein SAS-6_N PF16531.5 CTQ30811.1 - 0.038 14.6 0.0 0.052 14.1 0.0 1.2 1 0 0 1 1 1 0 Centriolar protein SAS N-terminal Phage_capsid PF05065.13 CTQ30813.1 - 5e-48 163.8 0.2 6.3e-47 160.2 0.0 2.0 2 0 0 2 2 2 1 Phage capsid family FlxA PF14282.6 CTQ30813.1 - 0.0022 18.0 2.3 0.004 17.1 2.3 1.4 1 0 0 1 1 1 1 FlxA-like protein Fe-ADH_2 PF13685.6 CTQ30813.1 - 0.03 14.0 0.1 0.046 13.4 0.1 1.3 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase Peptidase_S49 PF01343.18 CTQ30814.1 - 7.4e-35 120.2 0.4 1e-34 119.7 0.4 1.2 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.23 CTQ30814.1 - 0.04 13.8 0.1 0.1 12.5 0.1 1.6 2 0 0 2 2 2 0 Clp protease Phage_portal PF04860.12 CTQ30815.1 - 3.7e-89 299.0 0.0 4.3e-89 298.8 0.0 1.0 1 0 0 1 1 1 1 Phage portal protein Terminase_1 PF03354.15 CTQ30816.1 - 1.8e-76 257.6 0.0 2.1e-76 257.4 0.0 1.0 1 0 0 1 1 1 1 Phage Terminase Terminase_4 PF05119.12 CTQ30817.1 - 1.9e-10 41.1 0.0 2.2e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Phage terminase, small subunit CdiI_2 PF18593.1 CTQ30819.1 - 0.068 13.8 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 CdiI immunity protein Phasin PF05597.11 CTQ30821.1 - 0.056 13.4 0.0 0.92 9.5 0.0 2.2 2 0 0 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF4406 PF14359.6 CTQ30822.1 - 4.6e-32 110.3 0.0 5.2e-32 110.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4406) Nuc_deoxyrib_tr PF05014.15 CTQ30822.1 - 3.2e-05 23.9 0.0 4.1e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase DUF1937 PF09152.10 CTQ30822.1 - 0.0048 17.7 0.0 0.16 12.8 0.0 2.2 1 1 0 1 1 1 1 Domain of unknown function (DUF1937) TrbC PF04956.13 CTQ30825.1 - 0.13 12.5 3.9 0.2 11.9 1.4 2.0 1 1 0 2 2 2 0 TrbC/VIRB2 family Peptidase_S41_N PF11918.8 CTQ30825.1 - 0.14 12.4 0.1 0.2 11.9 0.1 1.3 1 0 0 1 1 1 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP N6_N4_Mtase PF01555.18 CTQ30827.1 - 2.8e-41 141.7 0.0 9.3e-41 140.0 0.0 1.7 1 1 0 1 1 1 1 DNA methylase Methyltransf_11 PF08241.12 CTQ30827.1 - 0.017 15.8 0.0 0.13 12.9 0.0 2.4 2 1 0 2 2 2 0 Methyltransferase domain MTS PF05175.14 CTQ30827.1 - 0.021 14.4 0.0 0.069 12.7 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase small domain UPF0020 PF01170.18 CTQ30827.1 - 0.068 12.8 0.2 0.72 9.5 0.0 2.2 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 HTH_24 PF13412.6 CTQ30828.1 - 0.0026 17.3 0.0 0.0038 16.8 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding FeoC PF09012.10 CTQ30828.1 - 0.034 14.2 0.0 0.045 13.8 0.0 1.2 1 0 0 1 1 1 0 FeoC like transcriptional regulator Dor1 PF04124.12 CTQ30829.1 - 0.00029 19.6 0.0 0.00033 19.5 0.0 1.0 1 0 0 1 1 1 1 Dor1-like family Gp49 PF05973.14 CTQ30830.1 - 6.3e-26 90.3 0.1 7.1e-26 90.2 0.1 1.0 1 0 0 1 1 1 1 Phage derived protein Gp49-like (DUF891) Rtt106_N PF18215.1 CTQ30830.1 - 0.038 13.7 0.0 0.16 11.7 0.0 1.9 2 0 0 2 2 2 0 Histone chaperone Rtt106 N-terminal domain HTH_3 PF01381.22 CTQ30831.1 - 7.2e-11 42.0 0.1 1.2e-10 41.3 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ30831.1 - 4.9e-10 39.6 0.0 6.3e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 CTQ30831.1 - 4.7e-09 36.1 0.0 5.7e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 CTQ30831.1 - 2.8e-08 33.7 0.0 4.8e-08 32.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 CTQ30831.1 - 0.00025 21.4 0.0 0.00042 20.7 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_24 PF13412.6 CTQ30831.1 - 0.00033 20.2 0.0 0.00052 19.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 CTQ30831.1 - 0.00067 19.5 0.0 0.00095 19.0 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_25 PF13413.6 CTQ30831.1 - 0.0037 17.1 0.0 0.0067 16.3 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 CTQ30831.1 - 0.0091 15.8 0.0 0.017 14.9 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain MarR PF01047.22 CTQ30831.1 - 0.018 14.9 0.0 0.028 14.4 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_38 PF13936.6 CTQ30831.1 - 0.021 14.6 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 CTQ30831.1 - 0.042 13.4 0.0 0.063 12.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 YdaS_antitoxin PF15943.5 CTQ30831.1 - 0.046 13.6 0.0 0.12 12.3 0.0 1.7 1 1 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_11 PF08279.12 CTQ30831.1 - 0.088 12.8 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_Crp_2 PF13545.6 CTQ30831.1 - 0.12 12.3 0.0 0.26 11.3 0.0 1.5 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain FeoC PF09012.10 CTQ30833.1 - 0.13 12.4 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator GIT_CC PF16559.5 CTQ30835.1 - 0.0065 16.3 0.2 0.011 15.5 0.2 1.4 1 0 0 1 1 1 1 GIT coiled-coil Rho guanine nucleotide exchange factor Shugoshin_N PF07558.11 CTQ30835.1 - 0.047 13.5 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region PglZ PF08665.12 CTQ30835.1 - 0.057 13.5 0.1 0.086 12.9 0.1 1.2 1 0 0 1 1 1 0 PglZ domain K-box PF01486.17 CTQ30835.1 - 0.062 13.5 0.0 0.12 12.6 0.0 1.4 1 1 0 1 1 1 0 K-box region bZIP_1 PF00170.21 CTQ30835.1 - 0.063 13.4 0.1 0.13 12.4 0.1 1.4 1 0 0 1 1 1 0 bZIP transcription factor RNase_T PF00929.24 CTQ30837.1 - 3e-23 83.2 0.3 1.8e-22 80.6 0.3 1.9 1 1 0 1 1 1 1 Exonuclease Phage_antiter_Q PF06323.11 CTQ30839.1 - 4.5e-74 248.7 4.1 5.1e-74 248.6 4.1 1.0 1 0 0 1 1 1 1 Phage antitermination protein Q Rootletin PF15035.6 CTQ30839.1 - 0.066 13.2 0.9 0.1 12.6 0.9 1.3 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Herpes_MCP PF03122.14 CTQ30839.1 - 0.1 10.1 0.0 0.13 9.7 0.0 1.1 1 0 0 1 1 1 0 Herpes virus major capsid protein HTH_3 PF01381.22 CTQ30840.1 - 3.7e-11 42.9 0.1 5.9e-11 42.2 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CTQ30840.1 - 1.6e-06 28.4 0.1 2.6e-06 27.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 CTQ30840.1 - 4.6e-05 23.2 0.0 8.8e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 CTQ30840.1 - 0.0013 18.7 0.0 0.0027 17.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_CI_repr PF07022.13 CTQ30840.1 - 0.013 15.6 0.0 19 5.5 0.0 3.1 2 1 1 3 3 3 0 Bacteriophage CI repressor helix-turn-helix domain Peptidase_S24 PF00717.23 CTQ30840.1 - 0.023 14.6 0.1 0.051 13.5 0.1 1.7 1 0 0 1 1 1 0 Peptidase S24-like HTH_37 PF13744.6 CTQ30840.1 - 0.14 12.1 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Herpes_ori_bp PF02399.15 CTQ30841.1 - 6.8e-07 27.8 0.0 0.00012 20.3 0.0 2.2 1 1 0 1 1 1 1 Origin of replication binding protein PCMT PF01135.19 CTQ30841.1 - 0.0025 17.6 0.0 0.0057 16.4 0.0 1.5 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Toprim_3 PF13362.6 CTQ30841.1 - 0.0078 16.6 0.0 0.034 14.5 0.0 2.2 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 CTQ30841.1 - 0.016 15.6 0.0 8.3 6.9 0.0 3.2 3 0 0 3 3 3 0 Toprim-like DUF3262 PF11660.8 CTQ30842.1 - 0.077 13.4 1.7 0.092 13.2 0.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3262) Glyco_tranf_2_4 PF13704.6 CTQ30843.1 - 0.017 15.6 0.4 0.035 14.6 0.2 1.5 2 0 0 2 2 2 0 Glycosyl transferase family 2 Glyco_trans_4_5 PF16994.5 CTQ30843.1 - 0.045 13.4 0.6 0.055 13.1 0.6 1.1 1 0 0 1 1 1 0 Glycosyl-transferase family 4 Colicin_im PF03857.13 CTQ30844.1 - 4e-05 23.6 10.7 4e-05 23.6 10.7 1.6 2 0 0 2 2 2 1 Colicin immunity protein Cucumopine_C PF18631.1 CTQ30844.1 - 0.062 13.3 1.2 0.092 12.7 1.2 1.4 1 1 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain DPM3 PF08285.11 CTQ30844.1 - 9.6 6.5 8.7 0.6 10.4 1.3 2.5 2 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Colicin PF01024.19 CTQ30845.1 - 8.5e-29 100.7 5.8 1.2e-28 100.2 5.8 1.2 1 0 0 1 1 1 1 Colicin pore forming domain LtuB PF17455.2 CTQ30847.1 - 0.053 14.1 0.1 0.055 14.1 0.1 1.1 1 0 0 1 1 1 0 Late transcription unit B Sugarporin_N PF11471.8 CTQ30848.1 - 0.0032 17.4 0.4 0.0066 16.4 0.4 1.5 1 0 0 1 1 1 1 Maltoporin periplasmic N-terminal extension Arg_decarbox_C PF17944.1 CTQ30848.1 - 0.27 11.8 3.7 0.54 10.8 0.2 2.3 1 1 1 2 2 2 0 Arginine decarboxylase C-terminal helical extension Bro-N PF02498.17 CTQ30849.1 - 1e-21 77.4 0.0 3.3e-21 75.8 0.0 1.8 2 0 0 2 2 2 1 BRO family, N-terminal domain Telomere_res PF16684.5 CTQ30850.1 - 6.3e-19 68.5 0.0 1.1e-18 67.7 0.0 1.6 1 1 0 1 1 1 1 Telomere resolvase Tub PF01167.18 CTQ30850.1 - 0.027 14.2 1.8 0.73 9.5 0.2 2.5 2 1 0 2 2 2 0 Tub family AnfO_nitrog PF09582.10 CTQ30850.1 - 0.029 13.7 1.0 0.089 12.1 0.8 1.9 2 0 0 2 2 2 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) DUF2254 PF10011.9 CTQ30851.1 - 1.5e-92 310.3 3.8 1.7e-92 310.1 3.8 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) DUF2304 PF10066.9 CTQ30851.1 - 0.013 15.7 3.2 0.013 15.7 3.2 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Phage_holin_6_1 PF09682.10 CTQ30851.1 - 0.63 10.5 7.9 3.2 8.2 0.7 2.4 2 0 0 2 2 2 0 Bacteriophage holin of superfamily 6 (Holin_LLH) YrvL PF14184.6 CTQ30851.1 - 4.1 7.5 13.6 0.16 12.1 4.2 2.5 2 0 0 2 2 2 0 Regulatory protein YrvL BCCT PF02028.17 CTQ30852.1 - 4.6e-195 648.7 41.1 5.4e-195 648.5 41.1 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter Claudin_3 PF06653.11 CTQ30852.1 - 0.008 16.1 1.2 0.008 16.1 1.2 3.3 3 1 1 4 4 4 1 Tight junction protein, Claudin-like NDUF_B12 PF08122.12 CTQ30852.1 - 0.64 10.1 0.1 0.64 10.1 0.1 3.2 3 0 0 3 3 3 0 NADH-ubiquinone oxidoreductase B12 subunit family DUF1192 PF06698.11 CTQ30853.1 - 0.018 15.1 0.3 0.021 14.9 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) Herpes_BLRF2 PF05812.12 CTQ30853.1 - 0.026 14.7 0.4 0.029 14.5 0.4 1.2 1 0 0 1 1 1 0 Herpesvirus BLRF2 protein Ribosomal_L29 PF00831.23 CTQ30853.1 - 0.035 14.1 3.7 0.044 13.7 3.7 1.1 1 0 0 1 1 1 0 Ribosomal L29 protein LEM PF03020.15 CTQ30853.1 - 0.17 11.5 5.7 1.5 8.4 0.6 2.9 2 1 0 2 2 2 0 LEM domain rve PF00665.26 CTQ30854.1 - 2.3e-26 92.3 0.0 3.7e-26 91.6 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 CTQ30854.1 - 5.8e-22 77.6 0.5 1.3e-21 76.5 0.5 1.7 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.6 CTQ30854.1 - 1e-18 67.2 7.2 1.9e-18 66.3 7.2 1.4 1 0 0 1 1 1 1 HTH-like domain rve_3 PF13683.6 CTQ30854.1 - 2.2e-13 49.8 0.0 4.1e-13 48.9 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 CTQ30854.1 - 6.1e-07 29.8 0.0 1.2e-06 28.8 0.0 1.5 1 0 0 1 1 1 1 DDE domain HTH_13 PF11972.8 CTQ30854.1 - 0.0016 18.5 0.3 0.0034 17.4 0.3 1.5 1 0 0 1 1 1 1 HTH DNA binding domain SecE PF00584.20 CTQ30856.1 - 6.4e-20 70.8 1.2 6.4e-20 70.8 1.2 2.8 3 0 0 3 3 3 1 SecE/Sec61-gamma subunits of protein translocation complex TRIQK PF15168.6 CTQ30856.1 - 0.067 13.1 0.1 0.067 13.1 0.1 2.4 2 2 0 2 2 2 0 Triple QxxK/R motif-containing protein family DUF1129 PF06570.11 CTQ30856.1 - 0.55 9.7 5.2 0.71 9.3 5.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Trp_oprn_chp PF09534.10 CTQ30856.1 - 2.7 7.8 11.7 3.2 7.5 11.7 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) NusG PF02357.19 CTQ30857.1 - 1.4e-27 96.0 0.0 2.1e-27 95.5 0.0 1.3 1 0 0 1 1 1 1 Transcription termination factor nusG KOW PF00467.29 CTQ30857.1 - 1.6e-08 34.2 0.2 5.9e-08 32.4 0.1 2.0 2 0 0 2 2 2 1 KOW motif Ribosomal_L11_N PF03946.14 CTQ30858.1 - 2.8e-32 110.3 0.3 5.1e-32 109.5 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 CTQ30858.1 - 7.7e-26 90.4 2.3 1.2e-25 89.8 2.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain DUF3140 PF11338.8 CTQ30858.1 - 0.037 14.4 0.2 0.13 12.7 0.1 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3140) AAA_lid_3 PF17862.1 CTQ30858.1 - 0.099 12.5 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA+ lid domain Ribosomal_L1 PF00687.21 CTQ30859.1 - 3.2e-53 180.5 0.2 4.1e-53 180.1 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family DUF3418 PF11898.8 CTQ30859.1 - 0.11 11.1 0.2 0.16 10.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) Ribosomal_L10 PF00466.20 CTQ30860.1 - 2.7e-25 88.4 0.0 3.9e-25 87.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L10 DUF349 PF03993.12 CTQ30860.1 - 0.3 11.4 2.7 0.44 10.9 0.0 2.3 2 1 0 2 2 2 0 Domain of Unknown Function (DUF349) Ribosomal_L12 PF00542.19 CTQ30861.1 - 5.6e-31 106.7 7.7 5.6e-31 106.7 7.7 1.6 2 1 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 CTQ30861.1 - 3e-17 62.0 9.5 3e-17 62.0 9.5 3.2 2 1 2 4 4 4 1 Ribosomal protein L7/L12 dimerisation domain Ribosomal_60s PF00428.19 CTQ30861.1 - 3.2 8.4 18.2 0.097 13.3 5.4 2.7 1 1 1 2 2 2 0 60s Acidic ribosomal protein RNA_pol_Rpb2_6 PF00562.28 CTQ30862.1 - 2.1e-159 530.8 0.1 3.7e-158 526.7 0.2 2.3 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 CTQ30862.1 - 1.5e-58 197.6 0.0 3.7e-58 196.4 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 CTQ30862.1 - 4.1e-31 107.0 0.0 9e-31 105.9 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_45 PF10385.9 CTQ30862.1 - 5e-29 100.4 0.1 6.1e-28 96.9 0.2 2.8 2 0 0 2 2 2 1 RNA polymerase beta subunit external 1 domain RNA_pol_Rpb2_7 PF04560.20 CTQ30862.1 - 7.5e-28 96.8 0.1 2e-27 95.4 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_2 PF04561.14 CTQ30862.1 - 6.1e-26 91.2 1.7 1.4e-15 57.4 0.1 3.3 3 0 0 3 3 3 2 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb1_1 PF04997.12 CTQ30863.1 - 1.5e-89 300.4 0.0 2.3e-89 299.8 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_5 PF04998.17 CTQ30863.1 - 1e-77 261.2 0.0 1.6e-77 260.6 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 CTQ30863.1 - 1.4e-37 129.5 0.1 4.1e-27 95.4 0.0 2.8 2 1 1 3 3 3 2 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 CTQ30863.1 - 2e-26 92.8 0.0 4.8e-26 91.6 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 CTQ30863.1 - 4.9e-19 68.3 0.3 1.3e-18 66.9 0.3 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 DcuA_DcuB PF03605.14 CTQ30864.1 - 1.3e-148 494.9 22.6 1.5e-148 494.6 22.6 1.0 1 0 0 1 1 1 1 Anaerobic c4-dicarboxylate membrane transporter DUF2206 PF09971.9 CTQ30864.1 - 0.13 11.0 5.9 0.019 13.7 0.7 2.3 3 0 0 3 3 3 0 Predicted membrane protein (DUF2206) PTS_IIA PF02255.16 CTQ30865.1 - 3.9e-31 107.0 4.6 4.4e-31 106.8 4.6 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIA subunit Ecm33 PF12454.8 CTQ30865.1 - 0.5 10.6 2.6 3 8.0 0.1 2.6 3 0 0 3 3 3 0 GPI-anchored cell wall organization protein PTS_IIB PF02302.17 CTQ30866.1 - 1.8e-25 89.5 2.0 2e-25 89.3 2.0 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit Rimk_N PF18030.1 CTQ30866.1 - 0.064 13.6 0.0 4.5 7.7 0.0 2.1 1 1 1 2 2 2 0 RimK PreATP-grasp domain GGDEF PF00990.21 CTQ30867.1 - 6.1e-32 110.6 0.0 9.2e-32 110.0 0.0 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain dCache_1 PF02743.18 CTQ30867.1 - 7.8e-21 75.0 0.0 1.4e-20 74.2 0.0 1.4 1 0 0 1 1 1 1 Cache domain DUF485 PF04341.12 CTQ30867.1 - 0.018 15.0 1.4 1.2 9.1 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function, DUF485 BATS PF06968.13 CTQ30868.1 - 1.2e-21 76.7 0.0 2.5e-21 75.6 0.0 1.6 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 CTQ30868.1 - 2.7e-09 37.6 0.0 5e-09 36.8 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily DUF3253 PF11625.8 CTQ30868.1 - 0.34 11.2 2.3 7 7.0 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3253) ThiG PF05690.14 CTQ30869.1 - 3e-109 364.1 3.9 3.4e-109 363.9 3.9 1.0 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 CTQ30869.1 - 1.1e-05 25.0 0.1 3.7e-05 23.3 0.1 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein IMPDH PF00478.25 CTQ30869.1 - 0.0042 16.1 1.1 0.006 15.6 1.1 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 CTQ30869.1 - 0.0064 15.7 0.2 0.013 14.7 0.2 1.6 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase FMN_dh PF01070.18 CTQ30869.1 - 0.01 14.9 1.0 0.016 14.3 1.0 1.3 1 0 0 1 1 1 0 FMN-dependent dehydrogenase DUF5488 PF17590.2 CTQ30869.1 - 0.35 10.6 1.4 2.5 7.9 0.9 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5488) ThiS PF02597.20 CTQ30870.1 - 3.4e-14 53.2 0.0 3.6e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 CTQ30870.1 - 0.00095 19.2 0.0 0.0075 16.3 0.0 1.9 1 1 0 1 1 1 1 ThiS-like ubiquitin ThiF PF00899.21 CTQ30871.1 - 5.3e-64 215.9 0.0 6.5e-64 215.6 0.0 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 CTQ30871.1 - 2.7e-05 24.4 0.9 0.00016 21.9 0.9 1.9 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 CTQ30871.1 - 0.016 15.6 0.0 0.034 14.6 0.0 1.5 1 1 0 1 1 1 0 Putative NAD(P)-binding ApbA PF02558.16 CTQ30871.1 - 0.018 14.7 0.1 0.03 13.9 0.1 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Shikimate_DH PF01488.20 CTQ30871.1 - 0.095 12.8 0.1 0.61 10.1 0.0 2.1 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase TMP-TENI PF02581.17 CTQ30872.1 - 4.6e-55 185.7 0.2 5.5e-55 185.5 0.2 1.0 1 0 0 1 1 1 1 Thiamine monophosphate synthase ThiC_Rad_SAM PF01964.18 CTQ30873.1 - 3e-199 662.0 0.0 6.6e-199 660.9 0.0 1.5 1 1 0 1 1 1 1 Radical SAM ThiC family ThiC-associated PF13667.6 CTQ30873.1 - 2.4e-34 117.0 0.2 6.6e-34 115.6 0.0 1.9 2 0 0 2 2 2 1 ThiC-associated domain Rsd_AlgQ PF04353.13 CTQ30874.1 - 1.9e-53 180.5 0.2 2.2e-53 180.3 0.2 1.0 1 0 0 1 1 1 1 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CTP_transf_3 PF02348.19 CTQ30874.1 - 0.0014 18.6 0.0 0.0019 18.2 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase NUDIX PF00293.28 CTQ30875.1 - 3.1e-17 62.8 0.4 7.4e-17 61.6 0.0 1.7 2 0 0 2 2 2 1 NUDIX domain zf-NADH-PPase PF09297.11 CTQ30875.1 - 4.5e-12 45.4 7.0 7.7e-12 44.7 7.0 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain DZR PF12773.7 CTQ30875.1 - 0.011 15.7 1.7 0.019 15.0 1.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 CTQ30875.1 - 0.018 14.7 3.5 0.12 12.1 1.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain C1_1 PF00130.22 CTQ30875.1 - 0.07 13.0 3.3 0.12 12.3 3.3 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Ogr_Delta PF04606.12 CTQ30875.1 - 0.2 11.6 3.1 0.5 10.4 3.1 1.7 1 1 0 1 1 1 0 Ogr/Delta-like zinc finger Zn_ribbon_recom PF13408.6 CTQ30875.1 - 0.34 11.4 6.3 2 9.0 6.3 2.1 1 1 0 1 1 1 0 Recombinase zinc beta ribbon domain PknG_rubred PF16919.5 CTQ30875.1 - 1.1 9.4 2.5 2.1 8.5 1.0 2.0 1 1 1 2 2 2 0 Protein kinase G rubredoxin domain zf-Mss51 PF13824.6 CTQ30875.1 - 3.8 7.7 6.0 1.1 9.5 2.6 1.9 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 URO-D PF01208.17 CTQ30876.1 - 6.8e-142 472.7 0.0 7.7e-142 472.5 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Endonuclease_5 PF04493.14 CTQ30877.1 - 2.7e-72 242.6 0.0 3.2e-72 242.4 0.0 1.0 1 0 0 1 1 1 1 Endonuclease V UvrC_HhH_N PF08459.11 CTQ30877.1 - 0.074 13.0 0.0 0.1 12.5 0.0 1.3 1 1 0 1 1 1 0 UvrC Helix-hairpin-helix N-terminal DUF416 PF04222.12 CTQ30878.1 - 1.1e-82 276.1 0.2 1.2e-82 275.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF416) Bac_DNA_binding PF00216.21 CTQ30879.1 - 6.7e-33 112.8 0.7 7.3e-33 112.6 0.7 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 CTQ30879.1 - 1.6e-08 34.7 0.0 1.7e-08 34.6 0.0 1.0 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 CTQ30879.1 - 4e-06 26.6 0.0 5.4e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 CTQ30879.1 - 0.00087 19.4 0.0 0.0013 18.9 0.0 1.2 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 CTQ30879.1 - 0.0027 17.8 0.0 0.003 17.7 0.0 1.1 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 NA37 PF04245.13 CTQ30879.1 - 0.083 12.4 0.0 0.084 12.3 0.0 1.1 1 0 0 1 1 1 0 37-kD nucleoid-associated bacterial protein DUF1481 PF07356.12 CTQ30880.1 - 5.8e-69 231.6 0.8 6.8e-69 231.4 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1481) Metal_resist PF13801.6 CTQ30881.1 - 1.5e-27 96.3 2.5 1.9e-27 95.9 2.5 1.1 1 0 0 1 1 1 1 Heavy-metal resistance DUF4337 PF14235.6 CTQ30881.1 - 0.002 18.3 2.5 0.0023 18.0 2.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4337) DUF3106 PF11304.8 CTQ30881.1 - 0.017 15.6 2.3 0.023 15.1 2.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3106) DUF3450 PF11932.8 CTQ30881.1 - 0.048 13.0 5.0 0.057 12.7 5.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Vps5 PF09325.10 CTQ30881.1 - 0.11 12.1 2.7 0.13 11.7 2.7 1.1 1 0 0 1 1 1 0 Vps5 C terminal like DUF4250 PF14056.6 CTQ30881.1 - 0.13 12.2 1.0 0.2 11.6 0.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) LTXXQ PF07813.12 CTQ30881.1 - 0.27 12.0 5.3 0.46 11.2 5.2 1.4 1 1 0 1 1 1 0 LTXXQ motif family protein HATPase_c PF02518.26 CTQ30882.1 - 8.3e-24 84.3 0.0 2.9e-23 82.5 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 CTQ30882.1 - 9.8e-14 51.2 1.2 3.6e-13 49.3 0.0 2.5 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain sCache_3_2 PF17203.4 CTQ30882.1 - 3.1e-09 37.1 0.0 8.8e-09 35.6 0.0 1.8 1 0 0 1 1 1 1 Single cache domain 3 HATPase_c_3 PF13589.6 CTQ30882.1 - 5.9e-05 22.9 0.1 0.00015 21.6 0.0 1.6 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 CTQ30882.1 - 0.00026 20.9 0.0 0.00047 20.0 0.0 1.4 1 0 0 1 1 1 1 GHKL domain dCache_1 PF02743.18 CTQ30882.1 - 0.0037 17.1 0.0 0.014 15.2 0.0 1.9 2 0 0 2 2 2 1 Cache domain HPTransfase PF10090.9 CTQ30882.1 - 0.0039 17.0 0.0 0.011 15.6 0.0 1.8 1 0 0 1 1 1 1 Histidine phosphotransferase C-terminal domain HATPase_c_2 PF13581.6 CTQ30882.1 - 0.004 17.1 0.0 0.01 15.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain DUF4079 PF13301.6 CTQ30882.1 - 0.064 13.4 1.2 1.8 8.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) Sigma54_activat PF00158.26 CTQ30883.1 - 2.6e-72 242.0 0.0 4e-72 241.4 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain Response_reg PF00072.24 CTQ30883.1 - 1.3e-29 102.6 0.1 2.6e-29 101.7 0.1 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Sigma54_activ_2 PF14532.6 CTQ30883.1 - 1.1e-23 83.8 0.0 3e-23 82.5 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 CTQ30883.1 - 3.8e-15 55.4 0.7 3.8e-15 55.4 0.7 2.3 3 0 0 3 3 3 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 CTQ30883.1 - 1e-07 32.0 0.0 2.3e-07 30.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 CTQ30883.1 - 0.00033 21.1 0.0 0.00078 19.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 CTQ30883.1 - 0.0012 18.3 0.1 0.067 12.6 0.1 2.4 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI HTH_30 PF13556.6 CTQ30883.1 - 0.0038 17.0 0.1 0.012 15.4 0.1 1.8 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain AAA_19 PF13245.6 CTQ30883.1 - 0.0051 17.1 0.1 0.041 14.2 0.1 2.4 1 1 0 1 1 1 1 AAA domain HTH_23 PF13384.6 CTQ30883.1 - 0.0098 15.7 0.1 0.045 13.5 0.0 2.2 2 0 0 2 2 2 1 Homeodomain-like domain AAA_2 PF07724.14 CTQ30883.1 - 0.014 15.5 0.0 0.05 13.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) FleQ PF06490.11 CTQ30883.1 - 0.017 15.4 0.1 0.048 14.0 0.1 1.7 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ HTH_28 PF13518.6 CTQ30883.1 - 0.018 15.2 0.1 0.067 13.3 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain MCM PF00493.23 CTQ30883.1 - 0.048 12.7 0.0 0.13 11.3 0.0 1.7 1 1 0 1 1 1 0 MCM P-loop domain Phage_NinH PF06322.11 CTQ30883.1 - 0.063 13.2 0.1 0.17 11.8 0.1 1.6 1 0 0 1 1 1 0 Phage NinH protein HTH_1 PF00126.27 CTQ30883.1 - 0.072 13.1 0.2 0.35 10.9 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family TIP49 PF06068.13 CTQ30883.1 - 0.082 12.1 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_22 PF13401.6 CTQ30883.1 - 0.089 13.1 0.1 0.38 11.0 0.0 2.1 1 1 1 2 2 2 0 AAA domain AAA_3 PF07726.11 CTQ30883.1 - 0.094 12.6 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) GARS_A PF01071.19 CTQ30884.1 - 3.6e-84 281.4 0.1 5e-84 280.9 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 CTQ30884.1 - 4.7e-36 123.4 0.1 9.7e-36 122.4 0.1 1.6 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 CTQ30884.1 - 4.7e-30 103.7 0.2 6.8e-29 100.0 0.1 2.3 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_3 PF02655.14 CTQ30884.1 - 2.2e-06 27.8 0.0 3.9e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 CTQ30884.1 - 1e-05 25.1 0.1 2.1e-05 24.1 0.1 1.5 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 CTQ30884.1 - 0.00016 21.3 0.0 0.00025 20.7 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.6 CTQ30884.1 - 0.0014 18.2 0.0 0.0065 16.1 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 CTQ30884.1 - 0.02 14.2 0.0 1.2 8.3 0.0 2.1 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp RimK PF08443.11 CTQ30884.1 - 0.055 13.1 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 RimK-like ATP-grasp domain ATP-grasp_2 PF08442.10 CTQ30884.1 - 0.082 12.5 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain tRNA_synt_1c_R1 PF04558.15 CTQ30884.1 - 0.22 11.5 0.0 0.35 10.9 0.0 1.2 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 AICARFT_IMPCHas PF01808.18 CTQ30885.1 - 4.7e-120 400.5 5.7 5.7e-120 400.2 5.7 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 CTQ30885.1 - 3.3e-30 104.1 0.0 9.3e-30 102.7 0.0 1.8 1 0 0 1 1 1 1 MGS-like domain CoA_binding_2 PF13380.6 CTQ30885.1 - 0.062 13.8 0.4 3.1 8.3 0.0 3.0 3 0 0 3 3 3 0 CoA binding domain ApbA PF02558.16 CTQ30886.1 - 0.029 14.0 0.0 0.03 14.0 0.0 1.0 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA SpoVG PF04026.12 CTQ30886.1 - 0.14 12.3 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 SpoVG Acetyltransf_10 PF13673.7 CTQ30887.1 - 1e-15 57.8 0.0 1.3e-15 57.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ30887.1 - 1.8e-12 47.5 0.0 2.5e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ30887.1 - 3.6e-10 40.1 0.0 4.9e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 CTQ30887.1 - 0.00024 21.0 0.0 0.00078 19.4 0.0 1.8 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.7 CTQ30887.1 - 0.011 15.8 0.0 0.027 14.6 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CTQ30887.1 - 0.044 13.9 0.0 0.067 13.3 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Pfk_N PF18468.1 CTQ30887.1 - 0.049 14.1 0.0 0.088 13.2 0.0 1.4 1 0 0 1 1 1 0 Phosphofructokinase N-terminal domain yeast PanZ PF12568.8 CTQ30887.1 - 0.067 12.9 0.0 0.11 12.2 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_CG PF14542.6 CTQ30887.1 - 0.1 12.7 0.0 0.18 12.0 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase HTS PF04204.16 CTQ30888.1 - 1.4e-132 441.2 0.0 1.5e-132 441.0 0.0 1.0 1 0 0 1 1 1 1 Homoserine O-succinyltransferase Malate_synthase PF01274.22 CTQ30889.1 - 1.2e-210 700.2 0.0 1.4e-210 700.0 0.0 1.0 1 0 0 1 1 1 1 Malate synthase HpcH_HpaI PF03328.14 CTQ30889.1 - 0.029 13.5 0.0 0.054 12.6 0.0 1.5 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family ICL PF00463.21 CTQ30890.1 - 2.9e-115 385.7 0.1 5.4e-62 210.0 0.0 2.0 1 1 1 2 2 2 2 Isocitrate lyase family PEP_mutase PF13714.6 CTQ30890.1 - 9.4e-18 64.5 0.0 2.4e-17 63.2 0.0 1.6 1 1 0 1 1 1 1 Phosphoenolpyruvate phosphomutase AceK PF06315.11 CTQ30891.1 - 1.2e-243 809.8 0.0 1.4e-243 809.6 0.0 1.0 1 0 0 1 1 1 1 Isocitrate dehydrogenase kinase/phosphatase (AceK) IclR PF01614.18 CTQ30892.1 - 1.3e-41 141.4 0.0 2.2e-41 140.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 CTQ30892.1 - 2.6e-18 65.5 2.0 4.3e-18 64.8 0.9 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 CTQ30892.1 - 0.0033 17.3 0.0 0.0068 16.3 0.0 1.5 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 CTQ30892.1 - 0.0092 16.3 0.0 0.028 14.8 0.0 1.8 1 0 0 1 1 1 1 Transcriptional regulator HTH_24 PF13412.6 CTQ30892.1 - 0.012 15.1 0.0 0.049 13.2 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 CTQ30892.1 - 0.016 15.1 0.1 0.032 14.2 0.1 1.5 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 CTQ30892.1 - 0.059 13.4 0.2 0.14 12.2 0.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ30892.1 - 0.13 12.2 0.2 0.59 10.2 0.1 2.1 2 1 0 2 2 2 0 Crp-like helix-turn-helix domain Met_synt_B12 PF02965.17 CTQ30893.1 - 3.2e-128 426.9 0.0 5.1e-128 426.3 0.0 1.3 1 0 0 1 1 1 1 Vitamin B12 dependent methionine synthase, activation domain S-methyl_trans PF02574.16 CTQ30893.1 - 1.9e-80 270.5 0.0 4.2e-80 269.4 0.0 1.6 1 0 0 1 1 1 1 Homocysteine S-methyltransferase Pterin_bind PF00809.22 CTQ30893.1 - 8e-64 215.6 0.4 9.2e-63 212.2 0.3 2.6 2 0 0 2 2 2 1 Pterin binding enzyme B12-binding_2 PF02607.17 CTQ30893.1 - 1.2e-25 89.8 0.2 4.6e-25 87.9 0.2 2.1 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.19 CTQ30893.1 - 8e-19 67.9 0.7 3.7e-18 65.7 0.2 2.4 2 0 0 2 2 2 1 B12 binding domain Na_Pi_cotrans PF02690.15 CTQ30894.1 - 7.9e-41 139.4 24.8 8.2e-33 113.4 10.3 2.3 2 0 0 2 2 2 2 Na+/Pi-cotransporter PhoU PF01895.19 CTQ30894.1 - 0.00041 20.8 7.6 0.097 13.1 2.8 3.3 2 1 1 3 3 3 2 PhoU domain RPW8 PF05659.11 CTQ30894.1 - 0.12 12.0 0.4 0.24 11.1 0.4 1.5 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Peptidase_S51 PF03575.17 CTQ30895.1 - 1.3e-58 198.1 0.0 1.5e-58 197.9 0.0 1.0 1 0 0 1 1 1 1 Peptidase family S51 BPL_N PF09825.9 CTQ30895.1 - 0.034 13.2 0.0 0.052 12.6 0.0 1.2 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal PseudoU_synth_2 PF00849.22 CTQ30896.1 - 1.8e-15 57.4 0.0 9.2e-15 55.1 0.0 1.9 1 1 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 CTQ30896.1 - 8.6e-15 54.2 1.1 5.1e-14 51.7 0.0 2.7 2 1 1 3 3 3 1 S4 domain S4_2 PF13275.6 CTQ30896.1 - 0.0016 18.2 0.0 0.0039 17.0 0.0 1.6 1 0 0 1 1 1 1 S4 domain DUF3811 PF11656.8 CTQ30897.1 - 1.8e-38 130.8 7.7 2e-38 130.7 7.7 1.0 1 0 0 1 1 1 1 YjbD family (DUF3811) PVL_ORF50 PF07768.11 CTQ30897.1 - 0.096 13.0 4.0 0.12 12.7 4.0 1.1 1 0 0 1 1 1 0 PVL ORF-50-like family SBF PF01758.16 CTQ30898.1 - 2.3e-40 138.3 20.5 2.3e-40 138.3 20.5 1.6 1 1 0 1 1 1 1 Sodium Bile acid symporter family SBF_like PF13593.6 CTQ30898.1 - 5.7e-20 71.9 21.6 6.3e-20 71.7 21.6 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) AA_kinase PF00696.28 CTQ30899.1 - 1.9e-47 161.9 0.2 3.1e-47 161.2 0.2 1.3 1 0 0 1 1 1 1 Amino acid kinase family ACT PF01842.25 CTQ30899.1 - 2.5e-07 30.3 0.0 3.2e-06 26.8 0.1 2.5 2 0 0 2 2 2 1 ACT domain ACT_7 PF13840.6 CTQ30899.1 - 2.2e-06 27.4 0.0 0.059 13.2 0.0 2.9 2 0 0 2 2 2 2 ACT domain PGI PF00342.19 CTQ30902.1 - 5.6e-256 849.7 0.2 6.4e-256 849.6 0.2 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase Hexapep PF00132.24 CTQ30903.1 - 7.3e-19 66.7 17.8 7.7e-09 34.9 0.1 5.2 3 2 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 CTQ30903.1 - 1.2e-14 53.8 16.9 3.6e-07 29.8 6.1 4.0 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 CTQ30903.1 - 0.0042 15.3 0.7 0.0079 14.4 0.6 1.5 1 1 1 2 2 2 2 Domain of unknown function (DUF4954) Acetyltransf_1 PF00583.25 CTQ30904.1 - 1.3e-09 38.3 0.1 1.6e-09 38.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CTQ30904.1 - 1.8e-07 31.1 0.0 2.6e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 CTQ30904.1 - 2.1e-05 25.2 0.2 2.6e-05 24.9 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CTQ30904.1 - 0.017 15.5 0.0 0.03 14.7 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ30904.1 - 0.08 12.9 0.0 0.13 12.2 0.0 1.5 1 1 0 1 1 1 0 FR47-like protein Ribonuc_L-PSP PF01042.21 CTQ30905.1 - 9.1e-41 138.7 0.6 1e-40 138.5 0.6 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP AzlD PF05437.12 CTQ30906.1 - 1.9e-16 60.0 7.3 2.2e-16 59.9 7.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) DUF4118 PF13493.6 CTQ30906.1 - 0.0087 15.8 3.0 0.0087 15.8 3.0 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4118) AzlC PF03591.14 CTQ30907.1 - 1.3e-33 116.3 9.8 1.3e-33 116.3 9.8 2.1 2 0 0 2 2 2 1 AzlC protein SDH_alpha PF03313.15 CTQ30908.1 - 4.6e-45 154.3 10.1 4.7e-45 154.3 7.3 2.0 2 0 0 2 2 2 1 Serine dehydratase alpha chain DUF3446 PF11928.8 CTQ30908.1 - 0.12 12.7 0.4 0.35 11.2 0.4 1.8 1 0 0 1 1 1 0 Early growth response N-terminal domain MmgE_PrpD PF03972.14 CTQ30908.1 - 6.9 5.1 11.0 1.5 7.3 6.8 1.9 2 1 0 2 2 2 0 MmgE/PrpD family PsiE PF06146.12 CTQ30909.1 - 3.6e-15 56.1 7.3 3.6e-15 56.1 7.3 1.7 2 0 0 2 2 2 1 Phosphate-starvation-inducible E Ytca PF17090.5 CTQ30909.1 - 0.083 13.4 1.9 0.083 13.4 1.9 2.4 2 1 0 2 2 2 0 Uncharacterised protein family BPD_transp_1 PF00528.22 CTQ30910.1 - 1.8e-14 53.9 16.5 1.8e-14 53.9 16.5 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component OATP PF03137.20 CTQ30910.1 - 0.063 11.6 0.3 0.11 10.7 0.3 1.4 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family MalF_P2 PF14785.6 CTQ30911.1 - 3.3e-59 199.6 0.1 4.1e-59 199.3 0.1 1.1 1 0 0 1 1 1 1 Maltose transport system permease protein MalF P2 domain BPD_transp_1 PF00528.22 CTQ30911.1 - 6.8e-22 78.1 17.8 6.8e-22 78.1 17.8 2.7 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component TM_PBP2_N PF16296.5 CTQ30911.1 - 0.00034 20.7 0.0 0.00034 20.7 0.0 3.1 4 0 0 4 4 4 1 N-terminal of TM subunit in PBP-dependent ABC transporters DUF3339 PF11820.8 CTQ30911.1 - 0.014 15.5 1.0 0.15 12.3 0.5 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3339) DUF4534 PF15049.6 CTQ30911.1 - 0.016 15.0 2.8 0.016 15.0 2.8 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4534) SBP_bac_8 PF13416.6 CTQ30912.1 - 2.9e-41 142.2 8.5 4.2e-41 141.6 8.5 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ30912.1 - 3.4e-40 138.9 15.1 5e-40 138.4 15.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein ABC_tran PF00005.27 CTQ30913.1 - 8e-32 110.6 0.0 1.4e-31 109.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 CTQ30913.1 - 1.3e-13 51.6 0.1 7.6e-13 49.1 0.0 2.4 2 0 0 2 2 2 1 MalK OB fold domain TOBE_2 PF08402.10 CTQ30913.1 - 1.9e-12 47.2 0.2 5.6e-12 45.6 0.2 1.9 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 CTQ30913.1 - 2.8e-06 27.4 0.1 0.0052 16.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ30913.1 - 9.4e-06 25.6 0.2 0.00045 20.2 0.0 2.5 3 0 0 3 3 3 1 RsgA GTPase SMC_N PF02463.19 CTQ30913.1 - 9.6e-05 21.9 0.2 0.085 12.3 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CTQ30913.1 - 0.00059 20.3 0.2 0.0014 19.0 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CTQ30913.1 - 0.0019 17.9 0.0 0.0039 16.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 CTQ30913.1 - 0.0068 16.6 0.1 0.021 15.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 CTQ30913.1 - 0.0078 16.7 0.0 0.012 16.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ30913.1 - 0.0086 16.3 0.0 0.027 14.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 CTQ30913.1 - 0.01 15.4 0.0 0.034 13.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 CTQ30913.1 - 0.019 14.7 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 CTQ30913.1 - 0.031 14.2 0.0 0.044 13.7 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA PF00004.29 CTQ30913.1 - 0.04 14.3 0.1 0.089 13.2 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 CTQ30913.1 - 0.041 14.0 0.0 0.091 12.9 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase TOBE PF03459.17 CTQ30913.1 - 0.044 14.1 0.8 0.28 11.5 0.3 2.4 2 0 0 2 2 2 0 TOBE domain AAA_28 PF13521.6 CTQ30913.1 - 0.046 14.0 0.1 0.1 12.9 0.1 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ30913.1 - 0.058 13.3 0.3 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 NACHT domain ATPase_2 PF01637.18 CTQ30913.1 - 0.067 13.1 0.0 0.095 12.6 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_30 PF13604.6 CTQ30913.1 - 0.097 12.4 0.0 0.43 10.3 0.0 2.2 2 1 0 2 2 2 0 AAA domain FeoB_N PF02421.18 CTQ30913.1 - 0.12 11.9 0.1 9.6 5.7 0.0 2.3 2 0 0 2 2 2 0 Ferrous iron transport protein B RNA_helicase PF00910.22 CTQ30913.1 - 0.14 12.6 0.0 0.27 11.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 CTQ30913.1 - 0.19 10.9 0.1 0.33 10.1 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain Ras PF00071.22 CTQ30913.1 - 0.21 11.1 0.2 14 5.2 0.1 2.4 2 0 0 2 2 2 0 Ras family LamB PF02264.15 CTQ30914.1 - 3e-144 481.6 23.1 3.4e-144 481.4 23.1 1.0 1 0 0 1 1 1 1 LamB porin OMP_b-brl PF13505.6 CTQ30914.1 - 0.021 14.9 19.1 0.035 14.2 6.2 3.8 2 1 2 4 4 4 0 Outer membrane protein beta-barrel domain MalM PF07148.12 CTQ30915.1 - 5e-49 165.5 0.0 8.4e-49 164.8 0.0 1.4 1 0 0 1 1 1 1 Maltose operon periplasmic protein precursor (MalM) Chor_lyase PF04345.13 CTQ30916.1 - 2.2e-33 115.2 0.0 2.7e-33 115.0 0.0 1.0 1 0 0 1 1 1 1 Chorismate lyase UbiA PF01040.18 CTQ30917.1 - 2.8e-68 229.9 22.6 3.4e-68 229.7 22.6 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF2516 PF10724.9 CTQ30917.1 - 5.4 7.4 11.4 3.6 7.9 0.3 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2516) Acyltransferase PF01553.21 CTQ30918.1 - 1.7e-26 92.5 0.0 2.9e-26 91.7 0.0 1.4 1 0 0 1 1 1 1 Acyltransferase DUF4148 PF13663.6 CTQ30918.1 - 0.0048 17.0 0.3 2.3 8.5 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4148) SelB-wing_2 PF09106.11 CTQ30918.1 - 0.29 11.4 4.5 0.54 10.5 0.4 3.4 4 0 0 4 4 4 0 Elongation factor SelB, winged helix DAGK_prokar PF01219.19 CTQ30919.1 - 1.3e-34 118.1 5.5 1.4e-34 117.9 5.5 1.0 1 0 0 1 1 1 1 Prokaryotic diacylglycerol kinase LexA_DNA_bind PF01726.16 CTQ30920.1 - 1.5e-31 108.0 0.2 3e-31 107.0 0.2 1.5 1 0 0 1 1 1 1 LexA DNA binding domain Peptidase_S24 PF00717.23 CTQ30920.1 - 2.7e-15 56.1 0.4 4.3e-15 55.4 0.4 1.3 1 0 0 1 1 1 1 Peptidase S24-like HTH_20 PF12840.7 CTQ30920.1 - 0.00029 20.8 0.0 0.00068 19.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 CTQ30920.1 - 0.002 18.4 0.0 0.0052 17.1 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_Crp_2 PF13545.6 CTQ30920.1 - 0.005 16.8 0.1 0.012 15.5 0.1 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain CSD2 PF17876.1 CTQ30920.1 - 0.013 15.6 0.1 0.038 14.2 0.1 1.7 2 0 0 2 2 2 0 Cold shock domain Sigma70_r4 PF04545.16 CTQ30920.1 - 0.015 14.8 0.1 0.13 11.8 0.0 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 MatE PF01554.18 CTQ30921.1 - 1.4e-43 148.3 32.3 1.1e-34 119.5 6.9 2.8 3 1 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 CTQ30921.1 - 1.1e-05 25.5 14.6 1.1e-05 25.5 14.6 4.8 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Sarcoglycan_1 PF04790.13 CTQ30921.1 - 0.93 8.8 2.3 1.9 7.8 2.3 1.5 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein CsbD PF05532.12 CTQ30922.1 - 3.1e-22 78.2 8.3 3.6e-22 78.0 8.3 1.1 1 0 0 1 1 1 1 CsbD-like FUR PF01475.19 CTQ30923.1 - 1.9e-15 57.1 0.0 3.1e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 Ferric uptake regulator family Penicillinase_R PF03965.16 CTQ30923.1 - 0.018 15.4 0.0 0.028 14.8 0.0 1.3 1 0 0 1 1 1 0 Penicillinase repressor TrmB PF01978.19 CTQ30923.1 - 0.02 14.8 0.0 0.04 13.8 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 CTQ30923.1 - 0.045 13.6 0.1 0.83 9.6 0.1 2.7 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family PadR PF03551.14 CTQ30923.1 - 0.058 13.4 0.0 0.19 11.7 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_57 PF18679.1 CTQ30923.1 - 0.14 12.5 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 ThcOx helix turn helix domain Cupin_2 PF07883.11 CTQ30924.1 - 6.8e-18 64.2 0.3 9.7e-18 63.7 0.3 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 CTQ30924.1 - 0.00021 20.9 0.0 0.00029 20.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 CTQ30924.1 - 0.061 12.9 0.0 0.17 11.5 0.0 1.5 1 1 0 1 1 1 0 Cupin Dus PF01207.17 CTQ30925.1 - 6.8e-95 317.7 0.0 7.9e-95 317.5 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 CTQ30925.1 - 0.14 11.6 0.0 0.5 9.8 0.0 1.7 2 0 0 2 2 2 0 Histidine biosynthesis protein Phageshock_PspG PF09583.10 CTQ30926.1 - 9.9e-26 89.8 25.9 1.1e-25 89.7 25.9 1.0 1 0 0 1 1 1 1 Phage shock protein G (Phageshock_PspG) SpoIIM PF01944.17 CTQ30926.1 - 0.051 13.6 7.2 0.054 13.5 7.2 1.0 1 0 0 1 1 1 0 Stage II sporulation protein M DUF3742 PF12553.8 CTQ30926.1 - 0.084 13.0 3.7 0.096 12.8 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) Phlebovirus_G1 PF07243.11 CTQ30926.1 - 0.24 9.7 2.8 0.26 9.6 2.8 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 DUF2207 PF09972.9 CTQ30926.1 - 8 5.1 7.8 10 4.7 7.8 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ADH_zinc_N PF00107.26 CTQ30927.1 - 4.2e-28 97.9 0.1 7.5e-28 97.1 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 CTQ30927.1 - 9.6e-18 65.5 0.0 1.5e-17 64.9 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 CTQ30927.1 - 1.3e-10 41.2 0.1 3.6e-10 39.7 0.0 1.7 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain YAcAr PF10686.9 CTQ30927.1 - 0.037 14.0 0.1 0.066 13.2 0.1 1.4 1 0 0 1 1 1 0 YspA, cpYpsA-related SLOG family DnaB_C PF03796.15 CTQ30928.1 - 2.4e-111 371.2 0.2 3.3e-111 370.7 0.2 1.2 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain DnaB PF00772.21 CTQ30928.1 - 1.5e-37 127.8 0.0 3.4e-37 126.7 0.0 1.6 1 0 0 1 1 1 1 DnaB-like helicase N terminal domain AAA_25 PF13481.6 CTQ30928.1 - 3.2e-09 36.6 0.0 5.7e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 CTQ30928.1 - 0.0018 17.7 0.0 0.0046 16.3 0.0 1.7 1 0 0 1 1 1 1 KaiC AAA_33 PF13671.6 CTQ30928.1 - 0.0023 18.1 0.0 0.011 15.9 0.0 2.2 1 1 0 1 1 1 1 AAA domain Ala_racemase_N PF01168.20 CTQ30929.1 - 1.2e-72 244.1 0.1 1.5e-72 243.8 0.1 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Ala_racemase_C PF00842.21 CTQ30929.1 - 1.1e-39 135.1 0.2 1.6e-39 134.6 0.2 1.2 1 0 0 1 1 1 1 Alanine racemase, C-terminal domain Aminotran_1_2 PF00155.21 CTQ30930.1 - 1.1e-82 278.1 0.0 1.2e-82 278.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Acid_phosphat_B PF03767.14 CTQ30931.1 - 1.4e-44 152.4 0.0 1.6e-44 152.2 0.0 1.0 1 0 0 1 1 1 1 HAD superfamily, subfamily IIIB (Acid phosphatase) HAD PF12710.7 CTQ30931.1 - 0.0056 17.1 0.0 0.051 14.0 0.0 2.1 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 CTQ30931.1 - 0.0067 16.5 0.0 0.014 15.4 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 CTQ30931.1 - 0.13 12.3 0.1 0.13 12.3 0.1 1.6 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 CTQ30931.1 - 0.21 11.3 1.2 0.64 9.7 0.0 2.1 2 1 1 3 3 3 0 haloacid dehalogenase-like hydrolase UPF0047 PF01894.17 CTQ30932.1 - 1.5e-35 121.8 0.0 1.7e-35 121.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 YjbR PF04237.13 CTQ30933.1 - 4.2e-18 65.7 0.1 4.9e-18 65.5 0.1 1.1 1 0 0 1 1 1 1 YjbR UvrA_inter PF17760.1 CTQ30934.1 - 5.4e-38 129.4 0.0 1.5e-37 128.0 0.0 1.8 1 0 0 1 1 1 1 UvrA interaction domain UvrA_DNA-bind PF17755.1 CTQ30934.1 - 1.8e-37 128.1 0.0 3.3e-36 124.0 0.0 2.6 3 0 0 3 3 2 1 UvrA DNA-binding domain ABC_tran PF00005.27 CTQ30934.1 - 5.3e-22 78.8 0.0 1.2e-05 25.8 0.0 4.9 4 1 0 4 4 4 4 ABC transporter SMC_N PF02463.19 CTQ30934.1 - 2.1e-11 43.7 0.0 0.028 13.9 0.0 4.3 4 1 0 4 4 4 4 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CTQ30934.1 - 1.3e-07 31.3 0.2 0.0012 18.6 0.1 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 CTQ30934.1 - 1.4e-07 32.1 0.3 0.028 14.8 0.1 3.6 3 1 0 3 3 3 2 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ30934.1 - 8e-06 25.9 0.0 0.035 14.0 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase DnaJ_CXXCXGXG PF00684.19 CTQ30934.1 - 2.3e-05 24.7 2.8 0.015 15.6 0.2 3.5 3 0 0 3 3 3 1 DnaJ central domain AAA_22 PF13401.6 CTQ30934.1 - 4.5e-05 23.8 0.9 1.2 9.4 0.0 3.9 4 0 0 4 4 3 2 AAA domain AAA_23 PF13476.6 CTQ30934.1 - 9.4e-05 23.0 3.5 0.42 11.1 0.1 3.0 3 0 0 3 3 3 2 AAA domain AAA_25 PF13481.6 CTQ30934.1 - 0.00027 20.6 0.1 0.12 11.9 0.0 2.8 3 0 0 3 3 2 1 AAA domain AAA_18 PF13238.6 CTQ30934.1 - 0.00066 20.2 0.1 2.9 8.4 0.0 2.9 2 0 0 2 2 2 2 AAA domain cobW PF02492.19 CTQ30934.1 - 0.0014 18.2 0.4 0.13 11.8 0.1 2.6 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 CTQ30934.1 - 0.0015 18.7 0.0 2.9 8.1 0.0 3.2 4 0 0 4 4 3 1 AAA domain NACHT PF05729.12 CTQ30934.1 - 0.0025 17.8 0.0 0.37 10.7 0.0 2.4 2 0 0 2 2 2 1 NACHT domain APS_kinase PF01583.20 CTQ30934.1 - 0.0042 17.0 0.1 1.5 8.7 0.0 2.8 2 0 0 2 2 2 1 Adenylylsulphate kinase T2SSE PF00437.20 CTQ30934.1 - 0.0049 16.0 0.1 3.2 6.7 0.0 2.5 2 0 0 2 2 2 2 Type II/IV secretion system protein DUF2075 PF09848.9 CTQ30934.1 - 0.0059 15.9 0.0 0.9 8.7 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 CTQ30934.1 - 0.0061 16.3 0.0 0.4 10.4 0.0 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_21 PF13304.6 CTQ30934.1 - 0.0066 16.3 7.3 0.62 9.8 0.0 4.0 4 0 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 CTQ30934.1 - 0.01 15.6 0.1 8.6 6.0 0.0 3.3 3 0 0 3 3 3 0 AAA domain ATPase PF06745.13 CTQ30934.1 - 0.012 14.9 0.0 5.8 6.2 0.0 2.5 2 0 0 2 2 2 0 KaiC AAA_14 PF13173.6 CTQ30934.1 - 0.03 14.4 0.0 15 5.6 0.0 3.3 3 0 0 3 3 3 0 AAA domain ATPase_2 PF01637.18 CTQ30934.1 - 0.041 13.8 0.0 4.7 7.1 0.0 2.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 CTQ30934.1 - 0.062 13.0 0.1 8.1 6.1 0.0 3.0 3 0 0 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 CTQ30934.1 - 0.069 13.2 0.1 3.6 7.7 0.0 2.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_7 PF12775.7 CTQ30934.1 - 0.1 12.1 0.1 18 4.8 0.0 2.6 2 0 0 2 2 2 0 P-loop containing dynein motor region MeaB PF03308.16 CTQ30934.1 - 0.11 11.5 0.1 2.3 7.1 0.0 2.4 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_28 PF13521.6 CTQ30934.1 - 0.15 12.3 0.1 18 5.5 0.0 2.6 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 CTQ30934.1 - 0.27 11.1 0.8 4.2 7.3 0.1 2.7 3 0 0 3 3 3 0 NTPase Zn-ribbon_8 PF09723.10 CTQ30934.1 - 6.7 6.9 9.5 6.3 7.0 0.3 3.6 3 0 0 3 3 3 0 Zinc ribbon domain SSB PF00436.25 CTQ30936.1 - 1.8e-43 146.8 0.6 2.2e-43 146.5 0.6 1.1 1 0 0 1 1 1 1 Single-strand binding protein family SBP_bac_3 PF00497.20 CTQ30937.1 - 1.1e-23 83.8 0.0 2e-23 83.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 SLT PF01464.20 CTQ30937.1 - 3.7e-16 58.8 0.0 7.6e-16 57.8 0.0 1.5 1 0 0 1 1 1 1 Transglycosylase SLT domain Lig_chan-Glu_bd PF10613.9 CTQ30937.1 - 0.00028 21.1 0.0 0.00048 20.3 0.0 1.5 1 0 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site TonB_dep_Rec PF00593.24 CTQ30939.1 - 1.4e-52 180.2 35.8 1.4e-52 180.2 35.8 1.7 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 CTQ30939.1 - 3.9e-26 91.7 1.0 1.5e-25 89.9 1.0 2.0 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain HTH_18 PF12833.7 CTQ30940.1 - 7.9e-23 80.5 0.1 1e-22 80.2 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ30940.1 - 2e-18 66.0 0.0 2.8e-08 33.6 0.0 2.2 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Tannase PF07519.11 CTQ30941.1 - 7.6e-116 387.8 0.0 1e-115 387.3 0.0 1.1 1 0 0 1 1 1 1 Tannase and feruloyl esterase Peptidase_S9 PF00326.21 CTQ30941.1 - 0.0003 20.3 0.2 0.037 13.5 0.0 2.4 2 0 0 2 2 2 2 Prolyl oligopeptidase family Esterase PF00756.20 CTQ30941.1 - 0.082 12.5 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Putative esterase SERTA PF06031.13 CTQ30942.1 - 0.0061 16.2 0.0 0.0079 15.8 0.0 1.1 1 0 0 1 1 1 1 SERTA motif Bac_surface_Ag PF01103.23 CTQ30943.1 - 2.4e-90 303.3 14.1 4.5e-90 302.4 14.1 1.5 1 0 0 1 1 1 1 Surface antigen POTRA PF07244.15 CTQ30943.1 - 1.5e-54 182.5 1.2 4.5e-15 56.0 0.1 5.3 5 0 0 5 5 5 5 Surface antigen variable number repeat POTRA_2 PF08479.11 CTQ30943.1 - 8.3e-05 22.3 0.4 4.3 7.2 0.0 4.6 4 1 0 4 4 4 2 POTRA domain, ShlB-type POTRA_1 PF08478.10 CTQ30943.1 - 0.00034 20.8 1.5 0.24 11.7 0.0 3.8 4 0 0 4 4 4 2 POTRA domain, FtsQ-type DUF3575 PF12099.8 CTQ30943.1 - 0.091 12.1 1.0 0.19 11.0 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3575) PmrD PF11183.8 CTQ30944.1 - 4.8e-06 26.6 0.1 5.9e-06 26.3 0.1 1.1 1 0 0 1 1 1 1 Polymyxin resistance protein PmrD Inositol_P PF00459.25 CTQ30945.1 - 1.1e-46 159.5 0.0 1.3e-46 159.3 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family XPB_DRD PF18458.1 CTQ30945.1 - 0.022 14.6 0.1 0.082 12.8 0.1 1.9 2 0 0 2 2 2 0 Xeroderma pigmentosum group B helicase damage recognition domain Peripla_BP_3 PF13377.6 CTQ30946.1 - 3.9e-26 92.4 3.0 3.4e-25 89.3 0.6 2.6 3 0 0 3 3 3 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 CTQ30946.1 - 2.6e-16 60.0 0.0 4.7e-16 59.1 0.0 1.4 2 0 0 2 2 2 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ30946.1 - 2.2e-15 56.8 0.0 3.2e-15 56.3 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 CTQ30946.1 - 2.5e-15 56.0 0.8 4.9e-15 55.1 0.8 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family TetR_N PF00440.23 CTQ30946.1 - 0.00066 19.4 0.6 0.19 11.5 0.2 3.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family PucR PF07905.11 CTQ30946.1 - 0.0043 17.3 0.0 0.014 15.7 0.0 1.8 1 1 0 1 1 1 1 Purine catabolism regulatory protein-like family HTH_31 PF13560.6 CTQ30946.1 - 0.0066 16.8 0.8 0.0066 16.8 0.8 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 CTQ30946.1 - 0.0091 15.9 2.7 0.018 14.9 0.2 2.8 3 0 0 3 3 3 1 MarR family HTH_Crp_2 PF13545.6 CTQ30946.1 - 0.016 15.1 0.2 0.094 12.7 0.1 2.3 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Hpr_kinase_N PF02603.16 CTQ30946.1 - 0.027 14.5 0.0 0.054 13.5 0.0 1.4 1 0 0 1 1 1 0 HPr Serine kinase N terminus HTH_3 PF01381.22 CTQ30946.1 - 0.06 13.4 0.0 0.23 11.5 0.0 1.9 1 1 0 1 1 1 0 Helix-turn-helix HTH_19 PF12844.7 CTQ30946.1 - 0.071 13.1 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain LPD22 PF18834.1 CTQ30946.1 - 0.11 12.8 1.5 0.48 10.7 0.0 2.5 2 1 1 3 3 3 0 Large polyvalent protein associated domain 22 HTH_11 PF08279.12 CTQ30946.1 - 0.13 12.2 0.2 0.58 10.2 0.0 2.3 2 0 0 2 2 2 0 HTH domain HTH_24 PF13412.6 CTQ30946.1 - 0.28 10.8 0.9 0.57 9.8 0.1 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Lactamase_B_2 PF12706.7 CTQ30947.1 - 2.2e-14 53.4 0.1 2.7e-14 53.2 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 CTQ30947.1 - 4.2e-09 36.7 0.2 7.9e-09 35.8 0.0 1.5 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 CTQ30947.1 - 0.041 13.3 0.0 0.056 12.9 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 CTQ30947.1 - 0.082 12.8 0.0 0.17 11.7 0.0 1.5 1 1 0 1 1 1 0 Beta-lactamase superfamily domain RMMBL PF07521.12 CTQ30947.1 - 0.097 12.6 0.0 0.29 11.1 0.0 1.7 2 0 0 2 2 2 0 Zn-dependent metallo-hydrolase RNA specificity domain ABC_tran PF00005.27 CTQ30948.1 - 7.1e-34 117.3 0.0 1.2e-33 116.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30948.1 - 3.9e-07 30.2 0.9 0.0062 16.4 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30948.1 - 5.2e-07 29.3 0.1 4.9e-06 26.1 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ30948.1 - 3.8e-05 23.6 0.0 7.8e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase Mg_chelatase PF01078.21 CTQ30948.1 - 0.00012 21.5 0.0 0.00085 18.8 0.0 2.0 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 CTQ30948.1 - 0.00016 22.1 0.0 0.0068 16.8 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) T2SSE PF00437.20 CTQ30948.1 - 0.00048 19.3 0.0 0.0011 18.1 0.0 1.6 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_23 PF13476.6 CTQ30948.1 - 0.0005 20.6 0.1 0.001 19.6 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ30948.1 - 0.00053 20.4 0.1 0.0013 19.2 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 CTQ30948.1 - 0.00095 19.2 0.0 0.0026 17.8 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 CTQ30948.1 - 0.0018 18.6 1.7 0.026 14.8 0.7 2.8 2 1 0 2 2 2 1 AAA domain TOBE_2 PF08402.10 CTQ30948.1 - 0.0028 17.8 0.1 0.023 14.8 0.0 2.5 2 0 0 2 2 2 1 TOBE domain AAA_29 PF13555.6 CTQ30948.1 - 0.0031 17.2 0.0 0.0067 16.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 CTQ30948.1 - 0.0087 15.7 0.2 0.052 13.1 0.0 2.1 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 CTQ30948.1 - 0.01 15.6 0.9 0.12 12.1 0.0 2.6 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_28 PF13521.6 CTQ30948.1 - 0.01 16.1 0.0 0.021 15.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CTQ30948.1 - 0.013 15.3 0.0 0.026 14.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CTQ30948.1 - 0.015 15.8 0.0 0.038 14.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 CTQ30948.1 - 0.022 14.8 0.0 0.073 13.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) FeoB_N PF02421.18 CTQ30948.1 - 0.022 14.3 0.4 0.085 12.4 0.0 2.0 2 0 0 2 2 2 0 Ferrous iron transport protein B Dynamin_N PF00350.23 CTQ30948.1 - 0.025 14.6 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 Dynamin family PIF1 PF05970.14 CTQ30948.1 - 0.034 13.3 0.0 0.054 12.7 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase NACHT PF05729.12 CTQ30948.1 - 0.038 13.9 0.5 0.085 12.8 0.1 1.8 2 0 0 2 2 1 0 NACHT domain Rad17 PF03215.15 CTQ30948.1 - 0.044 13.7 0.0 0.074 13.0 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_19 PF13245.6 CTQ30948.1 - 0.051 13.9 0.1 0.15 12.4 0.1 1.7 1 1 1 2 2 2 0 AAA domain SRP54 PF00448.22 CTQ30948.1 - 0.06 13.0 0.1 1 9.0 0.0 2.1 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain TsaE PF02367.17 CTQ30948.1 - 0.061 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 CTQ30948.1 - 0.078 13.1 0.3 0.22 11.7 0.2 1.9 1 1 0 1 1 1 0 AAA domain T6PP_N PF18572.1 CTQ30948.1 - 0.11 12.4 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain RNA_helicase PF00910.22 CTQ30948.1 - 0.11 12.9 0.0 0.23 11.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 CTQ30948.1 - 0.11 12.0 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 CTQ30948.1 - 0.11 12.1 0.0 0.34 10.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 CTQ30948.1 - 0.14 11.9 0.1 0.26 11.0 0.1 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation cobW PF02492.19 CTQ30948.1 - 0.17 11.5 0.0 0.39 10.3 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SBP_bac_8 PF13416.6 CTQ30949.1 - 6.8e-25 88.4 9.6 9.1e-25 88.0 9.3 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ30949.1 - 5.5e-15 56.1 12.2 8.7e-15 55.5 12.2 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ30949.1 - 3.3e-12 46.4 1.3 1e-11 44.7 1.3 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 CTQ30949.1 - 5.2e-09 36.2 1.3 2.6e-08 33.9 1.3 2.0 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 CTQ30950.1 - 4.6e-13 49.3 19.9 4.6e-13 49.3 19.9 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 CTQ30951.1 - 5.6e-17 62.1 15.4 5.6e-17 62.1 15.4 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2645 PF10840.8 CTQ30951.1 - 1.7 9.4 6.4 1.3 9.7 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2645) YjcB PF15940.5 CTQ30952.1 - 1.4e-45 153.4 3.5 1.5e-45 153.2 3.5 1.0 1 0 0 1 1 1 1 Family of unknown function EAL PF00563.20 CTQ30953.1 - 3.9e-63 213.1 0.0 5.3e-63 212.7 0.0 1.2 1 0 0 1 1 1 1 EAL domain CSS-motif PF12792.7 CTQ30953.1 - 3.2e-40 137.9 0.7 5.1e-40 137.2 0.7 1.3 1 0 0 1 1 1 1 CSS motif domain associated with EAL CBM26 PF16738.5 CTQ30953.1 - 0.038 14.2 0.2 0.09 13.1 0.2 1.6 1 0 0 1 1 1 0 Starch-binding module 26 HTH_18 PF12833.7 CTQ30954.1 - 1.2e-23 83.2 1.7 1.4e-23 82.9 1.7 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ30954.1 - 4.8e-19 67.9 0.2 1.9e-12 46.9 0.1 2.1 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family MerR PF00376.23 CTQ30955.1 - 9.6e-15 54.1 0.2 2.2e-14 52.9 0.0 1.7 2 0 0 2 2 2 1 MerR family regulatory protein MerR-DNA-bind PF09278.11 CTQ30955.1 - 2.1e-14 53.8 0.1 3.2e-14 53.2 0.1 1.3 1 0 0 1 1 1 1 MerR, DNA binding MerR_1 PF13411.6 CTQ30955.1 - 1e-12 47.9 0.0 1.6e-12 47.3 0.0 1.3 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_17 PF12728.7 CTQ30955.1 - 0.012 15.8 0.0 0.021 15.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain TPP_enzyme_M PF00205.22 CTQ30955.1 - 0.022 14.5 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain HTH_3 PF01381.22 CTQ30955.1 - 0.032 14.3 0.0 1.2 9.3 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix DUF2670 PF10875.8 CTQ30955.1 - 0.16 12.1 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) GST_N PF02798.20 CTQ30956.1 - 2.3e-18 66.3 0.0 3.4e-18 65.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 CTQ30956.1 - 1.4e-13 51.0 0.0 2.5e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 CTQ30956.1 - 7e-13 48.7 0.0 1.3e-12 47.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 CTQ30956.1 - 2.3e-05 24.5 0.0 4e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 CTQ30956.1 - 0.00019 21.6 0.0 0.00035 20.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 CTQ30956.1 - 0.00066 19.7 0.5 0.0016 18.4 0.4 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Xan_ur_permease PF00860.20 CTQ30957.1 - 2.6e-87 293.1 48.8 3.2e-87 292.8 48.8 1.1 1 0 0 1 1 1 1 Permease family MFS_MOT1 PF16983.5 CTQ30957.1 - 0.0096 16.3 14.7 0.0096 16.3 14.7 3.8 3 1 1 4 4 4 2 Molybdate transporter of MFS superfamily AcrZ PF10766.9 CTQ30957.1 - 0.12 11.9 0.2 0.12 11.9 0.2 4.1 5 0 0 5 5 5 0 Multidrug efflux pump-associated protein AcrZ Na_H_Exchanger PF00999.21 CTQ30958.1 - 3.9e-75 253.0 42.8 5e-75 252.7 42.8 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF4271 PF14093.6 CTQ30958.1 - 0.21 11.5 6.2 1.3 8.9 0.5 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF4271) LysR_substrate PF03466.20 CTQ30959.1 - 4.4e-43 147.1 0.3 5.5e-43 146.8 0.3 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 CTQ30959.1 - 4.5e-22 77.8 0.2 1.3e-21 76.3 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 CTQ30959.1 - 0.055 13.3 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain MarR PF01047.22 CTQ30959.1 - 0.084 12.8 0.0 0.2 11.6 0.0 1.7 1 0 0 1 1 1 0 MarR family CNOT1_TTP_bind PF16417.5 CTQ30959.1 - 0.13 11.4 0.0 0.72 9.0 0.0 2.0 3 0 0 3 3 3 0 CCR4-NOT transcription complex subunit 1 TTP binding domain PBP_like PF12727.7 CTQ30959.1 - 0.15 11.2 0.0 0.26 10.4 0.0 1.4 1 0 0 1 1 1 0 PBP superfamily domain Fe_dep_repress PF01325.19 CTQ30959.1 - 0.19 12.0 0.0 0.39 11.0 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain LrgA PF03788.14 CTQ30960.1 - 5.1e-24 84.0 12.1 5.1e-24 84.0 12.1 1.4 1 1 0 1 1 1 1 LrgA family LrgB PF04172.16 CTQ30961.1 - 3.3e-67 226.1 13.7 3.8e-67 226.0 13.7 1.0 1 0 0 1 1 1 1 LrgB-like family LrgA PF03788.14 CTQ30961.1 - 0.97 9.4 13.8 0.25 11.3 6.6 2.7 2 1 0 2 2 2 0 LrgA family Fimbrial PF00419.20 CTQ30962.1 - 2.7e-12 47.2 7.2 3.2e-12 47.0 7.2 1.1 1 0 0 1 1 1 1 Fimbrial protein PapD_N PF00345.20 CTQ30963.1 - 9.5e-39 132.2 0.1 6.8e-38 129.4 0.0 2.0 2 0 0 2 2 2 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 CTQ30963.1 - 1.6e-12 47.6 0.6 3.2e-12 46.6 0.3 1.7 2 0 0 2 2 2 1 Pili assembly chaperone PapD, C-terminal domain Usher PF00577.20 CTQ30964.1 - 1.1e-170 569.2 25.5 1.4e-170 568.8 25.5 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_N PF13954.6 CTQ30964.1 - 1e-39 135.8 0.0 2.5e-39 134.6 0.0 1.7 1 0 0 1 1 1 1 PapC N-terminal domain PapC_C PF13953.6 CTQ30964.1 - 3.7e-21 74.7 0.0 1.3e-20 72.9 0.0 2.0 1 0 0 1 1 1 1 PapC C-terminal domain Fimbrial PF00419.20 CTQ30965.1 - 8.6e-11 42.3 1.1 1.1e-10 42.0 1.1 1.1 1 0 0 1 1 1 1 Fimbrial protein Fimbrial PF00419.20 CTQ30966.1 - 6.7e-09 36.2 11.7 6.7e-09 36.2 11.7 2.2 2 1 0 2 2 2 1 Fimbrial protein SSF PF00474.17 CTQ30967.1 - 1.3e-134 449.1 39.9 2.1e-134 448.5 39.9 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family DUF2818 PF10993.8 CTQ30967.1 - 0.086 13.4 0.0 0.086 13.4 0.0 4.0 4 1 0 4 4 4 0 Protein of unknown function (DUF2818) DUF4094 PF13334.6 CTQ30967.1 - 2.1 8.8 4.9 17 5.9 1.0 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) DUF485 PF04341.12 CTQ30968.1 - 1.2e-33 114.9 0.3 1.3e-33 114.8 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF485 DUF2207 PF09972.9 CTQ30968.1 - 0.11 11.3 1.4 0.12 11.2 1.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) AMP-binding PF00501.28 CTQ30970.1 - 8.8e-94 314.5 0.0 1.1e-93 314.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CTQ30970.1 - 1e-26 93.7 0.0 2.2e-26 92.6 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 CTQ30970.1 - 3.6e-19 68.4 0.2 3.6e-19 68.4 0.2 2.1 2 0 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus SDF PF00375.18 CTQ30972.1 - 6.8e-115 384.2 37.1 7.7e-115 384.0 37.1 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family Sel1 PF08238.12 CTQ30973.1 - 7.8e-13 48.6 13.5 0.00057 20.5 2.2 4.8 5 0 0 5 5 5 4 Sel1 repeat TPR_16 PF13432.6 CTQ30973.1 - 4.5e-05 24.0 15.8 0.15 12.8 3.7 3.3 2 1 1 3 3 3 3 Tetratricopeptide repeat ANAPC3 PF12895.7 CTQ30973.1 - 0.00037 20.7 2.6 0.0033 17.6 1.7 2.7 1 1 2 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 CTQ30973.1 - 0.023 14.7 3.9 0.17 12.0 0.2 3.4 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 CTQ30973.1 - 0.031 14.4 8.7 0.06 13.5 1.2 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 CTQ30973.1 - 0.039 14.8 14.4 0.74 10.8 2.5 3.4 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 CTQ30973.1 - 0.042 14.4 14.8 0.69 10.5 4.0 3.4 2 2 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 CTQ30973.1 - 0.044 13.7 2.6 7.2 6.6 0.2 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat HemY_N PF07219.13 CTQ30973.1 - 0.14 12.3 6.5 0.093 12.9 1.0 2.5 1 1 1 2 2 2 0 HemY protein N-terminus TPR_12 PF13424.6 CTQ30973.1 - 0.21 11.9 6.2 2.1 8.7 3.8 2.9 1 1 2 3 3 3 0 Tetratricopeptide repeat Molybdopterin PF00384.22 CTQ30974.1 - 1.6e-85 287.6 0.0 3.7e-85 286.5 0.0 1.5 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 CTQ30974.1 - 1.2e-26 93.0 0.0 2.2e-26 92.1 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdopterin PF00384.22 CTQ30975.1 - 5.7e-19 68.4 0.0 6.7e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.16 CTQ30975.1 - 1.3e-16 60.3 0.8 2.1e-16 59.7 0.8 1.3 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Response_reg PF00072.24 CTQ30976.1 - 9.5e-24 83.7 0.2 1.8e-23 82.9 0.2 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 CTQ30976.1 - 1.3e-21 76.5 0.2 2.2e-21 75.7 0.2 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal OKR_DC_1_N PF03709.15 CTQ30976.1 - 0.0031 17.8 0.0 0.0055 17.0 0.0 1.4 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, N-terminal domain FleQ PF06490.11 CTQ30976.1 - 0.007 16.7 0.2 0.02 15.3 0.1 1.8 2 0 0 2 2 2 1 Flagellar regulatory protein FleQ ThiG PF05690.14 CTQ30976.1 - 0.029 13.7 0.1 0.042 13.1 0.1 1.4 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG GHMP_kinases_C PF08544.13 CTQ30976.1 - 0.034 14.5 0.3 5 7.6 0.2 3.1 2 1 1 3 3 3 0 GHMP kinases C terminal AbiEi_3 PF11459.8 CTQ30977.1 - 1.1e-47 161.7 0.0 2.9e-47 160.3 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulator, AbiEi antitoxin, Type IV TA system AbiEi_3_N PF17194.4 CTQ30977.1 - 1.8e-34 117.6 1.5 2.7e-34 117.1 1.0 1.5 2 0 0 2 2 2 1 Transcriptional regulator, AbiEi antitoxin N-terminal domain CNDH2_N PF06278.11 CTQ30977.1 - 0.15 12.3 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, N-terminal AbiEii PF08843.11 CTQ30978.1 - 1.8e-38 132.8 0.1 2.5e-38 132.4 0.1 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system PfkB PF00294.24 CTQ30979.1 - 9.4e-37 126.9 0.0 1.1e-36 126.7 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Sigma54_activ_2 PF14532.6 CTQ30979.1 - 0.11 12.6 0.0 0.48 10.5 0.0 2.0 3 0 0 3 3 3 0 Sigma-54 interaction domain Peripla_BP_4 PF13407.6 CTQ30980.1 - 8.6e-56 189.4 9.8 1e-55 189.1 9.8 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ30980.1 - 1.7e-17 63.7 0.9 2.8e-17 63.0 0.2 1.5 2 0 0 2 2 2 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 CTQ30980.1 - 2.6e-06 27.9 0.1 1e-05 26.0 0.0 1.9 1 1 1 2 2 2 1 Periplasmic binding protein-like domain BPD_transp_2 PF02653.16 CTQ30981.1 - 5.5e-44 150.3 49.1 9.1e-44 149.6 49.1 1.3 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 CTQ30982.1 - 9.1e-53 178.5 0.3 4.7e-31 108.1 0.1 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ30982.1 - 8.6e-10 38.9 1.0 0.013 15.4 0.0 3.2 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CTQ30982.1 - 0.00054 19.5 0.3 0.98 8.8 0.1 2.5 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 CTQ30982.1 - 0.001 19.0 0.4 0.013 15.4 0.0 2.5 2 0 0 2 2 2 1 RsgA GTPase AAA_30 PF13604.6 CTQ30982.1 - 0.0014 18.4 2.8 0.0069 16.1 2.8 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ30982.1 - 0.0034 17.1 0.2 0.011 15.4 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CTQ30982.1 - 0.016 15.7 0.1 0.032 14.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 CTQ30982.1 - 0.02 15.2 3.3 0.35 11.1 1.2 3.3 3 1 0 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 CTQ30982.1 - 0.027 14.6 0.1 0.52 10.4 0.0 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase TsaE PF02367.17 CTQ30982.1 - 0.035 14.1 1.4 0.52 10.3 0.1 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 CTQ30982.1 - 0.041 14.3 2.2 0.41 11.0 0.8 2.5 2 1 0 2 2 2 0 AAA ATPase domain AAA_27 PF13514.6 CTQ30982.1 - 0.056 13.0 0.6 0.16 11.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 CTQ30982.1 - 0.062 13.5 0.3 14 6.0 0.0 3.2 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit TniB PF05621.11 CTQ30982.1 - 0.064 12.7 1.4 0.7 9.3 0.4 2.6 3 0 0 3 3 3 0 Bacterial TniB protein Zeta_toxin PF06414.12 CTQ30982.1 - 0.1 11.9 1.5 5.8 6.2 0.1 2.4 2 0 0 2 2 2 0 Zeta toxin AAA_25 PF13481.6 CTQ30982.1 - 0.2 11.2 0.8 0.82 9.2 0.1 2.3 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 CTQ30982.1 - 0.21 12.0 0.0 0.66 10.4 0.0 1.8 2 0 0 2 2 2 0 RNA helicase AAA_10 PF12846.7 CTQ30982.1 - 0.23 10.4 2.2 0.36 9.7 0.0 2.3 3 0 0 3 3 3 0 AAA-like domain AAA PF00004.29 CTQ30982.1 - 0.46 10.9 3.4 12 6.3 0.1 3.2 4 0 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) HATPase_c PF02518.26 CTQ30983.1 - 3.5e-19 69.4 0.0 6.1e-19 68.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 CTQ30983.1 - 5.3e-10 39.4 0.0 1.5e-09 38.0 0.0 1.8 1 0 0 1 1 1 1 Response regulator receiver domain HAMP PF00672.25 CTQ30983.1 - 4.9e-09 36.4 1.4 2.2e-08 34.3 0.1 2.9 2 0 0 2 2 2 1 HAMP domain HisKA PF00512.25 CTQ30983.1 - 5e-06 26.5 0.2 5e-06 26.5 0.2 3.8 3 1 1 4 4 4 1 His Kinase A (phospho-acceptor) domain FleQ PF06490.11 CTQ30983.1 - 0.00095 19.5 0.1 0.0039 17.5 0.1 2.1 1 0 0 1 1 1 1 Flagellar regulatory protein FleQ HATPase_c_3 PF13589.6 CTQ30983.1 - 0.006 16.4 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tetraspanin PF00335.20 CTQ30983.1 - 0.014 15.2 0.2 0.18 11.5 0.0 2.1 2 0 0 2 2 2 0 Tetraspanin family DUF4407 PF14362.6 CTQ30984.1 - 0.099 12.0 5.1 0.11 11.9 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GCIP PF13324.6 CTQ30984.1 - 0.13 11.9 3.2 0.16 11.6 3.2 1.3 1 1 0 1 1 1 0 Grap2 and cyclin-D-interacting Atg14 PF10186.9 CTQ30984.1 - 0.16 11.0 4.7 0.17 11.0 4.7 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3552 PF12072.8 CTQ30984.1 - 0.25 10.7 10.4 0.34 10.3 10.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Lactamase_B_2 PF12706.7 CTQ30985.1 - 1.4e-13 50.8 0.1 2.4e-13 50.1 0.1 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 CTQ30985.1 - 0.0037 17.3 0.7 0.0067 16.5 0.7 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily LcrR PF09621.10 CTQ30985.1 - 0.16 11.4 0.0 0.97 8.9 0.0 1.9 2 0 0 2 2 2 0 Type III secretion system regulator (LcrR) AAA_18 PF13238.6 CTQ30986.1 - 2.3e-07 31.4 0.0 7.7e-07 29.7 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CTQ30986.1 - 1.6e-05 25.1 0.0 9.2e-05 22.6 0.0 2.0 1 1 0 1 1 1 1 AAA domain Guanylate_kin PF00625.21 CTQ30986.1 - 0.00014 21.6 0.0 0.00025 20.8 0.0 1.4 1 1 0 1 1 1 1 Guanylate kinase ABC_tran PF00005.27 CTQ30986.1 - 0.0013 19.2 0.0 0.0018 18.8 0.0 1.4 1 1 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 CTQ30986.1 - 0.028 14.8 0.1 0.23 11.8 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain Ploopntkinase3 PF18751.1 CTQ30986.1 - 0.032 14.2 0.0 0.28 11.1 0.0 2.0 1 1 1 2 2 2 0 P-loop Nucleotide Kinase3 AAA_29 PF13555.6 CTQ30986.1 - 0.033 13.9 0.0 0.055 13.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 CTQ30986.1 - 0.053 13.8 0.0 0.18 12.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 CTQ30986.1 - 0.057 13.3 0.0 0.074 12.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase Amidohydro_3 PF07969.11 CTQ30987.1 - 5.4e-14 52.5 7.2 4.4e-12 46.2 3.2 2.3 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 CTQ30987.1 - 2.4e-10 40.3 1.7 1.2e-09 38.0 1.7 2.1 1 1 0 1 1 1 1 Amidohydrolase family Atu4866 PF11512.8 CTQ30987.1 - 0.009 16.4 1.1 5.6 7.4 0.4 2.4 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Prim-Pol PF09250.11 CTQ30987.1 - 0.088 13.2 0.2 0.34 11.2 0.1 2.1 1 1 2 3 3 3 0 Bifunctional DNA primase/polymerase, N-terminal NAD_binding_7 PF13241.6 CTQ30987.1 - 0.15 12.6 0.0 0.32 11.5 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding ABC_tran PF00005.27 CTQ30988.1 - 9.1e-30 104.0 0.0 1.1e-29 103.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 CTQ30988.1 - 2.1e-07 31.5 0.0 2.8e-07 31.1 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 CTQ30988.1 - 7.4e-07 28.8 0.0 0.00026 20.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_33 PF13671.6 CTQ30988.1 - 2.4e-06 27.8 0.0 5.5e-06 26.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CTQ30988.1 - 0.00034 20.9 0.0 0.00052 20.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 CTQ30988.1 - 0.00065 19.4 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 CTQ30988.1 - 0.00071 19.5 0.0 0.68 9.7 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 CTQ30988.1 - 0.0012 18.8 0.0 0.0016 18.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 CTQ30988.1 - 0.007 16.0 0.1 0.019 14.6 0.0 1.7 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 CTQ30988.1 - 0.0091 15.9 0.0 0.019 14.9 0.0 1.5 1 0 0 1 1 1 1 NACHT domain AAA_30 PF13604.6 CTQ30988.1 - 0.0097 15.6 0.0 0.031 14.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 CTQ30988.1 - 0.041 13.2 0.0 0.073 12.4 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family SbcCD_C PF13558.6 CTQ30988.1 - 0.041 14.1 0.1 0.47 10.7 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Viral_helicase1 PF01443.18 CTQ30988.1 - 0.042 13.6 0.0 0.068 12.9 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_7 PF12775.7 CTQ30988.1 - 0.072 12.6 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_14 PF13173.6 CTQ30988.1 - 0.078 13.0 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 CTQ30988.1 - 0.08 13.4 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 CTQ30988.1 - 0.086 13.1 0.0 0.15 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 CTQ30988.1 - 0.091 11.9 0.0 0.12 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) RNA_helicase PF00910.22 CTQ30988.1 - 0.092 13.1 0.0 0.16 12.4 0.0 1.4 1 0 0 1 1 1 0 RNA helicase MukB PF04310.12 CTQ30988.1 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 MukB N-terminal MMR_HSR1 PF01926.23 CTQ30988.1 - 0.11 12.6 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase TsaE PF02367.17 CTQ30988.1 - 0.11 12.5 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 CTQ30988.1 - 0.12 12.1 0.0 0.36 10.5 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein NB-ARC PF00931.22 CTQ30988.1 - 0.12 11.5 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain cobW PF02492.19 CTQ30988.1 - 0.14 11.7 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Septin PF00735.18 CTQ30988.1 - 0.23 10.7 0.0 0.31 10.3 0.0 1.1 1 0 0 1 1 1 0 Septin ABC_tran PF00005.27 CTQ30989.1 - 5.8e-32 111.1 0.0 7.7e-32 110.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 CTQ30989.1 - 6.6e-09 36.0 0.0 0.0014 18.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ30989.1 - 1.8e-06 27.6 0.0 6.3e-06 25.8 0.0 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain oligo_HPY PF08352.12 CTQ30989.1 - 6.4e-06 26.6 0.0 1.1e-05 25.8 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_23 PF13476.6 CTQ30989.1 - 6.2e-05 23.6 0.0 6.6e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ30989.1 - 7.2e-05 23.2 0.3 0.00012 22.5 0.3 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CTQ30989.1 - 0.0011 19.2 0.0 0.0065 16.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 CTQ30989.1 - 0.0016 18.2 0.1 0.0039 16.9 0.1 1.7 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 CTQ30989.1 - 0.0022 17.9 0.1 0.0053 16.7 0.0 1.7 2 0 0 2 2 2 1 NACHT domain AAA_33 PF13671.6 CTQ30989.1 - 0.0032 17.7 0.1 0.0075 16.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 CTQ30989.1 - 0.0033 16.9 0.0 0.0078 15.7 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain MobB PF03205.14 CTQ30989.1 - 0.0047 16.8 0.1 0.0079 16.1 0.1 1.3 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B RsgA_GTPase PF03193.16 CTQ30989.1 - 0.0083 16.0 0.1 0.016 15.1 0.0 1.5 2 0 0 2 2 1 1 RsgA GTPase AAA_25 PF13481.6 CTQ30989.1 - 0.0096 15.5 0.9 0.067 12.8 0.9 2.1 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CTQ30989.1 - 0.0098 16.4 0.0 0.021 15.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 CTQ30989.1 - 0.013 15.2 0.0 0.28 10.8 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_5 PF07728.14 CTQ30989.1 - 0.017 15.1 0.0 0.039 13.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA PF00004.29 CTQ30989.1 - 0.024 15.1 0.0 0.55 10.7 0.0 2.2 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 CTQ30989.1 - 0.025 13.8 0.0 0.036 13.2 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain SbcCD_C PF13558.6 CTQ30989.1 - 0.029 14.6 0.0 0.066 13.5 0.0 1.6 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_19 PF13245.6 CTQ30989.1 - 0.031 14.6 0.0 0.067 13.5 0.0 1.6 1 1 0 1 1 1 0 AAA domain PRK PF00485.18 CTQ30989.1 - 0.032 14.0 0.0 0.062 13.0 0.0 1.5 2 0 0 2 2 1 0 Phosphoribulokinase / Uridine kinase family NTPase_1 PF03266.15 CTQ30989.1 - 0.037 13.9 0.2 0.4 10.6 0.1 2.0 2 0 0 2 2 2 0 NTPase cobW PF02492.19 CTQ30989.1 - 0.04 13.5 0.1 0.061 12.9 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 CTQ30989.1 - 0.054 13.4 0.0 0.097 12.6 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_27 PF13514.6 CTQ30989.1 - 0.077 12.6 0.2 4 7.0 0.0 2.4 2 1 1 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 CTQ30989.1 - 0.097 12.8 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_28 PF13521.6 CTQ30989.1 - 0.1 12.8 0.0 0.31 11.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 CTQ30989.1 - 0.11 11.8 0.1 0.19 11.0 0.1 1.3 1 0 0 1 1 1 0 Zeta toxin DUF87 PF01935.17 CTQ30989.1 - 0.14 12.3 0.1 0.24 11.4 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Rad17 PF03215.15 CTQ30989.1 - 0.16 11.9 0.0 0.84 9.5 0.0 1.9 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_24 PF13479.6 CTQ30989.1 - 0.18 11.5 0.1 0.28 10.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain Roc PF08477.13 CTQ30989.1 - 0.19 12.0 0.1 0.44 10.8 0.0 1.6 2 0 0 2 2 1 0 Ras of Complex, Roc, domain of DAPkinase TsaE PF02367.17 CTQ30989.1 - 0.19 11.7 0.0 0.41 10.7 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 CTQ30989.1 - 0.22 11.9 0.0 0.4 11.1 0.0 1.4 1 0 0 1 1 1 0 RNA helicase PhnJ PF06007.11 CTQ30990.1 - 1.7e-149 496.3 0.0 2e-149 496.1 0.0 1.0 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnJ PhnI PF05861.12 CTQ30991.1 - 7.4e-154 511.8 0.0 8.5e-154 511.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial phosphonate metabolism protein (PhnI) PhnG PF06754.12 CTQ30991.1 - 8.9e-05 22.5 0.0 0.00016 21.7 0.0 1.5 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnG PhnH PF05845.12 CTQ30992.1 - 6.1e-62 208.7 0.4 6.8e-62 208.6 0.4 1.0 1 0 0 1 1 1 1 Bacterial phosphonate metabolism protein (PhnH) PhnG PF06754.12 CTQ30993.1 - 2.3e-51 173.5 0.3 2.6e-51 173.3 0.3 1.0 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnG UTRA PF07702.13 CTQ30994.1 - 1.3e-29 102.8 0.2 2.4e-29 102.0 0.2 1.4 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 CTQ30994.1 - 7.3e-21 73.6 1.2 1.5e-20 72.6 0.2 2.1 3 0 0 3 3 3 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 CTQ30994.1 - 1.1e-05 25.3 0.0 2.5e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 CTQ30994.1 - 2.1e-05 24.7 0.0 0.00069 19.9 0.0 2.6 2 1 1 3 3 3 1 Transcriptional regulator MarR_2 PF12802.7 CTQ30994.1 - 7.4e-05 22.6 0.1 0.00038 20.3 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 CTQ30994.1 - 0.0015 18.5 0.2 0.0045 16.9 0.2 1.9 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 CTQ30994.1 - 0.013 15.4 0.0 0.027 14.3 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Cullin_Nedd8 PF10557.9 CTQ30994.1 - 0.014 15.4 0.0 0.03 14.3 0.0 1.5 1 0 0 1 1 1 0 Cullin protein neddylation domain HTH_36 PF13730.6 CTQ30994.1 - 0.018 15.0 0.0 0.045 13.7 0.0 1.7 2 0 0 2 2 1 0 Helix-turn-helix domain RP-C PF03428.13 CTQ30994.1 - 0.019 14.6 0.1 0.056 13.1 0.0 1.8 2 0 0 2 2 2 0 Replication protein C N-terminal domain HTH_DeoR PF08220.12 CTQ30994.1 - 0.021 14.6 0.2 0.059 13.1 0.2 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ30994.1 - 0.031 14.2 0.0 0.091 12.7 0.0 1.8 1 0 0 1 1 1 0 HTH domain HTH_IclR PF09339.10 CTQ30994.1 - 0.04 13.7 0.1 0.13 12.0 0.0 1.9 2 0 0 2 2 2 0 IclR helix-turn-helix domain PaaX PF07848.12 CTQ30994.1 - 0.079 13.2 1.0 0.17 12.2 0.2 1.9 2 0 0 2 2 2 0 PaaX-like protein 3-dmu-9_3-mt PF06983.13 CTQ30995.1 - 6.9e-05 23.4 0.2 0.00065 20.2 0.2 1.9 1 1 0 1 1 1 1 3-demethylubiquinone-9 3-methyltransferase Glyoxalase PF00903.25 CTQ30995.1 - 0.00011 22.5 0.0 0.00017 21.8 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PhnA PF03831.14 CTQ30996.1 - 8.5e-35 118.5 4.8 1e-34 118.2 4.8 1.1 1 0 0 1 1 1 1 PhnA domain PhnA_Zn_Ribbon PF08274.12 CTQ30996.1 - 1.2e-13 50.7 6.3 2e-13 50.0 6.3 1.4 1 0 0 1 1 1 1 PhnA Zinc-Ribbon TF_Zn_Ribbon PF08271.12 CTQ30996.1 - 5.4e-05 22.6 0.9 5.4e-05 22.6 0.9 1.7 2 0 0 2 2 2 1 TFIIB zinc-binding zf-RRN7 PF11781.8 CTQ30996.1 - 0.00015 21.4 1.1 0.00026 20.6 1.1 1.4 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 PADR1 PF08063.12 CTQ30996.1 - 0.0035 17.1 1.7 0.0063 16.3 1.7 1.4 1 0 0 1 1 1 1 PADR1 (NUC008) domain Zn_Tnp_IS1595 PF12760.7 CTQ30996.1 - 0.019 14.9 1.8 0.033 14.2 1.8 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain TFIIS_C PF01096.18 CTQ30996.1 - 0.031 14.1 2.6 1.6 8.7 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) A2L_zn_ribbon PF08792.10 CTQ30996.1 - 0.036 13.8 0.8 0.08 12.7 0.8 1.6 1 0 0 1 1 1 0 A2L zinc ribbon domain zinc-ribbons_6 PF07191.12 CTQ30996.1 - 0.078 13.0 1.2 0.13 12.2 1.2 1.3 1 0 0 1 1 1 0 zinc-ribbons zf-TFIIB PF13453.6 CTQ30996.1 - 0.092 12.1 0.8 11 5.5 0.2 2.3 2 0 0 2 2 2 0 Transcription factor zinc-finger OrfB_Zn_ribbon PF07282.11 CTQ30996.1 - 0.11 12.4 0.9 0.2 11.6 0.9 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain UPF0547 PF10571.9 CTQ30996.1 - 0.12 12.5 5.4 0.54 10.4 0.3 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 HypA PF01155.19 CTQ30996.1 - 0.24 11.4 0.9 0.32 11.0 0.3 1.5 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Auto_anti-p27 PF06677.12 CTQ30996.1 - 0.29 11.3 2.2 0.49 10.6 2.2 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C2H2_3 PF13878.6 CTQ30996.1 - 0.35 10.7 2.6 14 5.6 0.1 2.5 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-ribbon_3 PF13248.6 CTQ30996.1 - 0.5 9.9 4.5 9 5.9 0.1 2.6 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 CTQ30996.1 - 0.95 9.4 4.0 24 5.0 4.0 2.5 1 1 0 1 1 1 0 zinc-ribbon domain Sugar_tr PF00083.24 CTQ30997.1 - 1.3e-66 225.3 24.6 2.2e-66 224.6 24.6 1.3 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 CTQ30997.1 - 6.1e-34 117.5 40.6 2.8e-25 89.0 15.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Osmo_CC PF08946.10 CTQ30997.1 - 4.9e-23 81.1 7.0 7.8e-23 80.5 7.0 1.3 1 0 0 1 1 1 1 Osmosensory transporter coiled coil MFS_2 PF13347.6 CTQ30997.1 - 8e-06 24.7 19.5 8e-06 24.7 19.5 2.0 1 1 2 3 3 3 2 MFS/sugar transport protein MerR-DNA-bind PF09278.11 CTQ30997.1 - 0.057 14.0 0.2 0.13 12.8 0.2 1.6 1 0 0 1 1 1 0 MerR, DNA binding CLZ PF16526.5 CTQ30997.1 - 0.16 12.3 0.1 0.32 11.4 0.1 1.4 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Prefoldin PF02996.17 CTQ30997.1 - 0.16 11.9 0.7 0.28 11.1 0.7 1.3 1 0 0 1 1 1 0 Prefoldin subunit ABC_tran_CTD PF16326.5 CTQ30997.1 - 0.27 11.5 1.4 0.48 10.7 1.4 1.3 1 0 0 1 1 1 0 ABC transporter C-terminal domain DUF1043 PF06295.12 CTQ30997.1 - 0.52 10.3 1.7 0.87 9.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) HTH_AraC PF00165.23 CTQ30998.1 - 9.5e-20 70.2 0.7 5.1e-09 36.0 0.1 3.0 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 CTQ30998.1 - 2.7e-19 69.2 0.1 5.5e-19 68.2 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 CTQ30998.1 - 5.3e-05 22.9 0.0 0.0001 21.9 0.0 1.4 1 0 0 1 1 1 1 Cupin domain Rrf2 PF02082.20 CTQ30998.1 - 0.064 13.6 0.1 0.16 12.3 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator Glyco_hydro_4 PF02056.16 CTQ31000.1 - 6.1e-77 257.3 0.0 8.3e-77 256.9 0.0 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Glyco_hydro_4C PF11975.8 CTQ31000.1 - 3.2e-60 203.8 0.0 4.2e-60 203.4 0.0 1.1 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain MFS_2 PF13347.6 CTQ31001.1 - 1.8e-82 277.2 44.5 2.1e-82 277.0 44.5 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Tetraspanin PF00335.20 CTQ31001.1 - 5.6 6.6 10.8 0.24 11.1 3.5 2.3 2 1 0 2 2 2 0 Tetraspanin family StbA PF06406.11 CTQ31002.1 - 5.7e-126 420.1 0.0 6.3e-126 419.9 0.0 1.0 1 0 0 1 1 1 1 StbA protein Hydantoinase_A PF01968.18 CTQ31002.1 - 0.00034 20.0 0.4 0.037 13.3 0.1 2.3 1 1 1 2 2 2 2 Hydantoinase/oxoprolinase ALP_N PF17989.1 CTQ31002.1 - 0.016 15.4 0.0 0.031 14.4 0.0 1.6 1 1 0 1 1 1 0 Actin like proteins N terminal domain Plasmid_stab_B PF10784.9 CTQ31003.1 - 9.4e-16 57.4 0.2 1.4e-15 56.9 0.2 1.3 1 0 0 1 1 1 1 Plasmid stability protein Ribosomal_60s PF00428.19 CTQ31003.1 - 0.0087 16.6 3.5 0.013 16.1 3.5 1.2 1 0 0 1 1 1 1 60s Acidic ribosomal protein MerR_2 PF13591.6 CTQ31004.1 - 5.3e-27 93.5 0.2 6e-27 93.3 0.2 1.0 1 0 0 1 1 1 1 MerR HTH family regulatory protein NRBF2 PF08961.10 CTQ31004.1 - 0.2 11.3 0.4 0.26 10.9 0.4 1.2 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator DnaJ_C PF01556.18 CTQ31005.1 - 6e-32 110.8 0.0 8e-32 110.4 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 CTQ31005.1 - 1.4e-22 79.6 2.3 2.9e-22 78.6 2.3 1.5 1 0 0 1 1 1 1 DnaJ domain PTPlike_phytase PF14566.6 CTQ31005.1 - 0.14 12.3 0.6 0.22 11.6 0.6 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate BILBO1_N PF18281.1 CTQ31005.1 - 0.52 10.8 2.5 0.82 10.1 0.7 2.0 1 1 1 2 2 2 0 BILBO1 N-terminal domain TerC PF03741.16 CTQ31006.1 - 2e-43 148.2 14.3 2e-43 148.2 14.3 1.4 2 0 0 2 2 2 1 Integral membrane protein TerC family YfhO PF09586.10 CTQ31006.1 - 0.47 8.6 1.9 0.65 8.1 1.9 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Thioredoxin_4 PF13462.6 CTQ31008.1 - 1.6e-12 47.9 1.0 4.3e-12 46.5 0.0 1.9 1 1 1 2 2 2 1 Thioredoxin ScsC_N PF18312.1 CTQ31008.1 - 4e-12 45.7 6.3 7.9e-12 44.8 5.1 2.2 2 0 0 2 2 2 1 Copper resistance protein ScsC N-terminal domain DSBA PF01323.20 CTQ31008.1 - 5.3e-09 36.1 6.9 1.2e-08 35.0 3.0 2.7 2 1 0 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 CTQ31008.1 - 1.4e-06 28.7 2.6 4.1e-05 24.0 0.4 2.9 2 1 0 2 2 2 1 Thioredoxin-like domain Thioredoxin PF00085.20 CTQ31008.1 - 0.0051 16.8 0.5 0.061 13.3 0.0 2.5 3 0 0 3 3 3 1 Thioredoxin Thioredoxin_3 PF13192.6 CTQ31008.1 - 0.075 13.1 0.1 18 5.5 0.0 2.5 2 0 0 2 2 2 0 Thioredoxin domain PgaD PF13994.6 CTQ31009.1 - 2e-21 76.6 4.8 5.6e-21 75.2 4.8 1.6 1 1 0 1 1 1 1 PgaD-like protein DUF4381 PF14316.6 CTQ31009.1 - 1.7 8.9 6.5 0.35 11.1 2.9 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4381) Glyco_tranf_2_3 PF13641.6 CTQ31010.1 - 4.3e-38 131.5 0.0 6.9e-38 130.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 CTQ31010.1 - 1.9e-35 122.2 0.0 2.7e-35 121.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 CTQ31010.1 - 1.1e-23 84.2 12.9 1.1e-23 84.2 12.9 2.7 2 1 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 CTQ31010.1 - 5.6e-16 58.5 0.1 8.8e-16 57.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 CTQ31010.1 - 5.8e-08 32.5 0.0 1.1e-07 31.6 0.0 1.4 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Chitin_synth_2 PF03142.15 CTQ31010.1 - 9.4e-07 27.8 4.1 5e-05 22.1 0.0 2.7 2 1 1 3 3 3 2 Chitin synthase Glyco_tranf_2_4 PF13704.6 CTQ31010.1 - 0.0056 17.2 0.1 0.012 16.1 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Cellulose_synt PF03552.14 CTQ31010.1 - 0.077 11.5 5.1 0.11 11.0 5.1 1.1 1 0 0 1 1 1 0 Cellulose synthase GHL13 PF14883.6 CTQ31011.1 - 4.4e-147 489.4 3.5 7.4e-147 488.6 3.5 1.4 1 0 0 1 1 1 1 Hypothetical glycosyl hydrolase family 13 Polysacc_deac_1 PF01522.21 CTQ31011.1 - 4.3e-26 91.2 0.0 2.6e-25 88.7 0.0 2.2 2 0 0 2 2 2 1 Polysaccharide deacetylase GHL10 PF02638.15 CTQ31011.1 - 2.1e-06 27.1 0.6 8.3e-06 25.1 0.1 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase-like 10 DUF560 PF04575.13 CTQ31012.1 - 8.9e-05 22.1 4.2 0.00025 20.6 1.3 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF560) TPR_14 PF13428.6 CTQ31012.1 - 0.016 16.0 0.3 0.016 16.0 0.3 9.1 8 3 3 11 11 11 0 Tetratricopeptide repeat Nterm_IS4 PF13006.7 CTQ31012.1 - 0.14 12.4 0.5 1.1 9.5 0.3 2.4 2 0 0 2 2 2 0 Insertion element 4 transposase N-terminal TPR_2 PF07719.17 CTQ31012.1 - 0.52 10.6 0.0 0.52 10.6 0.0 4.2 5 0 0 5 5 5 0 Tetratricopeptide repeat JAKMIP_CC3 PF16034.5 CTQ31012.1 - 1.3 8.9 3.9 0.4 10.6 0.4 1.9 2 0 0 2 2 2 0 JAKMIP CC3 domain GerE PF00196.19 CTQ31013.1 - 1.3e-06 27.8 0.1 2e-06 27.2 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_7 PF02796.15 CTQ31013.1 - 0.00088 19.3 0.0 0.0019 18.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase E2 PF08199.11 CTQ31013.1 - 0.019 14.9 0.5 1 9.3 0.0 2.4 2 0 0 2 2 2 0 Bacteriophage E2-like protein PerC PF06069.11 CTQ31014.1 - 1.7e-27 95.5 0.4 2e-27 95.3 0.4 1.0 1 0 0 1 1 1 1 PerC transcriptional activator MIT PF04212.18 CTQ31014.1 - 0.0072 16.4 0.2 0.015 15.4 0.2 1.5 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain BDV_P40 PF06407.11 CTQ31014.1 - 0.019 14.1 0.0 0.022 13.9 0.0 1.1 1 0 0 1 1 1 0 Borna disease virus P40 protein Glyco_hydro_125 PF06824.11 CTQ31014.1 - 0.11 11.4 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Metal-independent alpha-mannosidase (GH125) DUF1176 PF06674.11 CTQ31015.1 - 2.8e-89 299.8 0.1 4.2e-89 299.2 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1176) TetR_C_31 PF17940.1 CTQ31016.1 - 0.035 14.3 2.2 0.14 12.3 0.1 2.2 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 CTQ31016.1 - 0.045 13.6 0.0 0.094 12.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family DsbC PF11412.8 CTQ31017.1 - 3.3e-35 120.7 0.2 5.9e-35 119.9 0.2 1.4 1 0 0 1 1 1 1 Disulphide bond corrector protein DsbC DsbD PF02683.15 CTQ31017.1 - 2e-19 70.3 18.9 2.9e-19 69.8 18.9 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Thioredoxin_7 PF13899.6 CTQ31017.1 - 1.1e-13 51.2 0.1 2.3e-13 50.1 0.1 1.5 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 CTQ31017.1 - 6e-10 39.6 0.0 9.7e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 CTQ31017.1 - 1.8e-08 34.3 0.0 2.9e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin DsbD_2 PF13386.6 CTQ31017.1 - 1.3e-07 31.8 25.4 1.3e-07 31.8 25.4 2.2 2 1 0 2 2 2 1 Cytochrome C biogenesis protein transmembrane region CutA1 PF03091.15 CTQ31018.1 - 2.5e-32 110.7 0.1 2.8e-32 110.5 0.1 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein DcuA_DcuB PF03605.14 CTQ31019.1 - 1.4e-153 511.2 25.1 1.7e-153 510.9 25.1 1.1 1 0 0 1 1 1 1 Anaerobic c4-dicarboxylate membrane transporter CitMHS PF03600.16 CTQ31019.1 - 2.7 7.1 50.7 0.46 9.6 37.2 2.6 1 1 1 2 2 2 0 Citrate transporter Lyase_1 PF00206.20 CTQ31020.1 - 2.9e-109 365.2 0.0 3.5e-109 365.0 0.0 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 CTQ31020.1 - 1e-16 61.0 0.0 3.6e-16 59.3 0.0 2.0 1 0 0 1 1 1 1 Fumarase C C-terminus FxsA PF04186.13 CTQ31021.1 - 1.6e-33 115.1 7.4 2e-33 114.8 7.4 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein AA_permease_2 PF13520.6 CTQ31022.1 - 2.7e-29 102.3 31.8 3.4e-29 101.9 31.8 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 CTQ31022.1 - 2.1e-08 33.2 33.3 7.5e-08 31.4 33.2 1.7 1 1 0 1 1 1 1 Amino acid permease Cpn10 PF00166.21 CTQ31023.1 - 6.4e-30 103.1 1.5 7e-30 102.9 1.5 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Cpn60_TCP1 PF00118.24 CTQ31024.1 - 1.1e-95 321.1 19.3 1.8e-95 320.5 19.3 1.3 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF4156 PF13698.6 CTQ31025.1 - 3.4e-32 110.6 0.4 4e-32 110.4 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4156) YjeJ PF15922.5 CTQ31026.1 - 4.9e-123 409.9 0.4 5.5e-123 409.7 0.4 1.0 1 0 0 1 1 1 1 YjeJ-like ABC_tran PF00005.27 CTQ31027.1 - 5.9e-11 43.0 0.0 8.4e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 CTQ31027.1 - 3.5e-06 26.6 0.0 3.9e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Usher PF00577.20 CTQ31028.1 - 1.1e-180 602.2 25.3 1.4e-180 601.9 25.3 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_N PF13954.6 CTQ31028.1 - 2.2e-42 144.5 0.0 5.2e-42 143.3 0.0 1.7 1 0 0 1 1 1 1 PapC N-terminal domain OEP PF02321.18 CTQ31028.1 - 1.8 8.3 6.5 13 5.5 2.0 2.9 2 0 0 2 2 2 0 Outer membrane efflux protein PapD_N PF00345.20 CTQ31029.1 - 1.8e-37 128.0 0.0 2.8e-37 127.4 0.0 1.3 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 CTQ31029.1 - 1.8e-14 53.8 1.0 4.6e-14 52.5 0.5 1.9 2 0 0 2 2 2 1 Pili assembly chaperone PapD, C-terminal domain DUF5001 PF16392.5 CTQ31029.1 - 2.3e-05 24.2 0.0 0.0014 18.5 0.0 2.7 2 1 0 2 2 2 1 Ig-like domain Fimbrial PF00419.20 CTQ31030.1 - 8.1e-10 39.2 11.9 8.9e-10 39.0 11.5 1.2 1 1 0 1 1 1 1 Fimbrial protein SRC-1 PF08832.10 CTQ31030.1 - 0.067 14.3 1.1 0.13 13.3 0.1 2.0 2 0 0 2 2 2 0 Steroid receptor coactivator DUF2574 PF10836.8 CTQ31030.1 - 6.1 6.8 10.7 3.9 7.4 2.8 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2574) Trans_reg_C PF00486.28 CTQ31031.1 - 1.8e-12 47.2 0.0 2.7e-12 46.6 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Renin_r PF07850.14 CTQ31031.1 - 0.099 13.3 0.0 0.17 12.5 0.0 1.3 1 0 0 1 1 1 0 Renin receptor-like protein PsbJ PF01788.17 CTQ31031.1 - 0.22 11.4 4.9 0.4 10.6 4.9 1.3 1 0 0 1 1 1 0 PsbJ Radical_SAM PF04055.21 CTQ31032.1 - 2.1e-09 37.9 0.0 2.1e-08 34.7 0.0 2.2 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 CTQ31032.1 - 2e-06 28.1 0.0 6.7e-06 26.4 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 CTQ31032.1 - 6.8e-06 26.2 0.0 1.4e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Elong-fact-P_C PF09285.11 CTQ31033.1 - 2.9e-26 91.0 0.4 7e-26 89.7 0.4 1.7 1 0 0 1 1 1 1 Elongation factor P, C-terminal EFP_N PF08207.12 CTQ31033.1 - 4.6e-24 84.2 0.0 1.5e-23 82.6 0.0 1.9 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 CTQ31033.1 - 6.3e-23 80.6 0.0 1.2e-22 79.7 0.0 1.5 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain Entericidin PF08085.11 CTQ31034.1 - 2.9e-07 30.3 1.9 4.3e-07 29.7 1.9 1.3 1 0 0 1 1 1 1 Entericidin EcnA/B family LPAM_1 PF08139.12 CTQ31034.1 - 1.1 9.9 5.6 1.8 9.2 1.1 2.2 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site Multi_Drug_Res PF00893.19 CTQ31035.1 - 1e-31 109.4 12.4 1e-31 109.4 12.4 1.3 2 0 0 2 2 2 1 Small Multidrug Resistance protein EamA PF00892.20 CTQ31035.1 - 0.0049 17.1 14.3 0.0063 16.7 14.3 1.2 1 0 0 1 1 1 1 EamA-like transporter family Lipocalin_2 PF08212.12 CTQ31036.1 - 3.3e-40 137.4 0.0 3.9e-40 137.1 0.0 1.0 1 0 0 1 1 1 1 Lipocalin-like domain Lipocalin PF00061.23 CTQ31036.1 - 6.4e-05 23.2 0.0 8.4e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Lipocalin / cytosolic fatty-acid binding protein family Fumarate_red_D PF02313.17 CTQ31037.1 - 9.9e-51 170.6 5.7 1.1e-50 170.5 5.7 1.0 1 0 0 1 1 1 1 Fumarate reductase subunit D Fumarate_red_C PF02300.17 CTQ31038.1 - 7.1e-56 187.7 6.2 8e-56 187.6 6.2 1.0 1 0 0 1 1 1 1 Fumarate reductase subunit C Sdh_cyt PF01127.22 CTQ31038.1 - 0.013 15.5 1.1 0.013 15.5 1.1 2.0 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Fer2_3 PF13085.6 CTQ31039.1 - 7.9e-31 106.3 0.0 1.5e-30 105.4 0.0 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 CTQ31039.1 - 1.7e-11 44.4 1.7 1.7e-11 44.4 1.7 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ31039.1 - 1.1e-10 41.5 1.8 1.1e-10 41.5 1.8 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 CTQ31039.1 - 1.1e-08 35.4 12.4 6.4e-07 29.8 3.6 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 CTQ31039.1 - 1.4e-07 32.0 11.5 2.5e-06 28.0 3.5 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 CTQ31039.1 - 3.8e-07 30.2 5.0 0.0014 18.8 0.6 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 CTQ31039.1 - 1e-05 26.4 1.7 1e-05 26.4 1.7 2.2 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.27 CTQ31039.1 - 0.00036 20.2 1.4 0.00036 20.2 1.4 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 CTQ31039.1 - 0.00039 20.6 7.4 0.024 14.8 0.1 2.7 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ31039.1 - 0.0018 18.6 1.3 0.0018 18.6 1.3 2.7 3 0 0 3 3 2 1 4Fe-4S binding domain Fer2 PF00111.27 CTQ31039.1 - 0.0039 17.1 0.0 0.0039 17.1 0.0 2.0 2 0 0 2 2 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_2 PF12797.7 CTQ31039.1 - 0.0055 16.7 1.7 0.0055 16.7 1.7 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 CTQ31039.1 - 0.01 15.9 2.6 0.01 15.9 2.6 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 CTQ31039.1 - 0.018 15.6 0.4 0.018 15.6 0.4 2.9 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 CTQ31039.1 - 0.11 13.5 3.7 0.11 13.5 3.7 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 CTQ31039.1 - 0.49 10.6 14.2 0.18 12.0 7.9 2.6 2 1 0 2 2 1 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 CTQ31039.1 - 1.8 9.5 9.9 1.3 9.9 0.4 2.7 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 CTQ31039.1 - 3.2 8.6 8.0 3.2 8.6 0.1 2.7 3 0 0 3 3 2 0 4Fe-4S single cluster domain FAD_binding_2 PF00890.24 CTQ31040.1 - 1.2e-115 386.9 0.8 1.2e-115 386.9 0.8 1.4 2 0 0 2 2 2 1 FAD binding domain Succ_DH_flav_C PF02910.20 CTQ31040.1 - 2.4e-38 131.0 0.0 4.2e-38 130.2 0.0 1.4 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 CTQ31040.1 - 5.4e-10 39.0 0.9 0.00018 20.9 0.7 3.0 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 CTQ31040.1 - 0.00079 18.7 0.1 0.0082 15.4 0.1 2.3 2 0 0 2 2 2 1 Thi4 family HI0933_like PF03486.14 CTQ31040.1 - 0.00081 18.2 0.3 0.014 14.1 0.1 2.6 3 0 0 3 3 3 1 HI0933-like protein GIDA PF01134.22 CTQ31040.1 - 0.0061 15.7 3.2 0.046 12.8 2.5 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A Myb_DNA-bind_4 PF13837.6 CTQ31040.1 - 0.014 15.7 0.0 0.23 11.8 0.0 2.3 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain DAO PF01266.24 CTQ31040.1 - 0.054 13.1 5.0 0.045 13.3 2.1 2.4 2 1 0 2 2 2 0 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 CTQ31040.1 - 0.13 11.3 0.5 0.24 10.4 0.5 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein Intein_splicing PF14890.6 CTQ31040.1 - 0.15 12.0 0.0 0.3 11.0 0.0 1.4 1 0 0 1 1 1 0 Intein splicing domain FAD_oxidored PF12831.7 CTQ31040.1 - 1.2 8.4 8.3 2.7 7.3 3.4 2.9 3 0 0 3 3 3 0 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 CTQ31040.1 - 5.3 6.2 5.2 4.3 6.5 2.5 2.2 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase tRNA-synt_2 PF00152.20 CTQ31041.1 - 1.7e-47 162.0 0.0 3.3e-47 161.1 0.0 1.4 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) AA_permease_2 PF13520.6 CTQ31042.1 - 5e-31 108.0 60.3 6.4e-31 107.6 60.3 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 CTQ31042.1 - 1.6e-10 40.2 53.4 3.4e-10 39.1 53.4 1.5 1 1 0 1 1 1 1 Amino acid permease MscS_TM PF12794.7 CTQ31043.1 - 6.1e-112 373.8 20.0 6.1e-112 373.8 20.0 2.3 2 0 0 2 2 2 1 Mechanosensitive ion channel inner membrane domain 1 MscS_porin PF12795.7 CTQ31043.1 - 2.6e-53 181.0 61.5 2.6e-53 181.0 61.5 3.0 1 1 2 3 3 3 1 Mechanosensitive ion channel porin domain MS_channel PF00924.18 CTQ31043.1 - 4.2e-53 180.0 0.4 1.4e-52 178.3 0.4 2.0 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF2909 PF11137.8 CTQ31043.1 - 0.25 11.3 0.0 0.25 11.3 0.0 4.1 4 1 1 5 5 5 0 Protein of unknown function (DUF2909) PS_Dcarbxylase PF02666.15 CTQ31044.1 - 5.8e-59 199.0 0.0 6.9e-59 198.8 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase RsgA_GTPase PF03193.16 CTQ31045.1 - 2e-55 187.3 0.0 2.7e-55 186.8 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 CTQ31045.1 - 8.6e-06 25.8 0.0 1.6e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CTQ31045.1 - 7.8e-05 22.2 0.1 0.29 10.6 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B ABC_tran PF00005.27 CTQ31045.1 - 0.00067 20.2 0.6 0.01 16.4 0.0 2.3 2 0 0 2 2 2 1 ABC transporter AAA_29 PF13555.6 CTQ31045.1 - 0.005 16.6 0.0 0.0096 15.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 CTQ31045.1 - 0.0058 17.0 0.1 0.037 14.4 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain cobW PF02492.19 CTQ31045.1 - 0.0082 15.7 0.4 1.4 8.5 0.1 2.3 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain GTP_EFTU PF00009.27 CTQ31045.1 - 0.016 14.8 0.2 0.22 11.0 0.0 2.5 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain AAA_21 PF13304.6 CTQ31045.1 - 0.054 13.3 0.1 0.1 12.4 0.1 1.5 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system IIGP PF05049.13 CTQ31045.1 - 0.14 11.2 0.0 0.21 10.6 0.0 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA_22 PF13401.6 CTQ31045.1 - 0.16 12.2 0.4 0.62 10.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 CTQ31045.1 - 0.18 11.8 1.3 0.42 10.7 0.7 1.8 1 1 1 2 2 2 0 Dynamin family RNase_T PF00929.24 CTQ31046.1 - 6.1e-36 124.4 0.0 6.9e-36 124.3 0.0 1.0 1 0 0 1 1 1 1 Exonuclease SBP_bac_3 PF00497.20 CTQ31047.1 - 3.8e-59 199.8 1.4 4.3e-59 199.7 1.4 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 CTQ31047.1 - 7e-05 23.0 0.0 0.0045 17.2 0.0 2.3 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site DUF5623 PF18536.1 CTQ31047.1 - 0.11 12.7 0.0 0.35 11.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5623) DUF1730 PF08331.10 CTQ31050.1 - 1.2e-24 86.0 0.0 2.7e-24 84.8 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1730) Fer4_16 PF13484.6 CTQ31050.1 - 3.1e-19 69.7 3.7 5.5e-19 68.9 3.7 1.4 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 CTQ31050.1 - 6.7e-05 23.0 0.8 0.019 15.1 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 CTQ31050.1 - 0.0001 22.3 5.0 0.016 15.3 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 CTQ31050.1 - 0.00058 20.4 7.7 0.0045 17.6 7.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 CTQ31050.1 - 0.0056 17.1 2.4 0.31 11.5 1.6 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 CTQ31050.1 - 0.026 14.7 7.1 1.8 8.8 3.3 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 CTQ31050.1 - 0.11 12.6 15.1 0.95 9.7 5.2 2.9 2 2 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 CTQ31050.1 - 0.19 11.6 15.0 0.091 12.6 6.1 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_3 PF12798.7 CTQ31050.1 - 0.22 12.6 10.6 3 9.0 4.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 CTQ31050.1 - 0.39 10.9 5.0 5.1 7.3 2.0 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 CTQ31050.1 - 1.6 9.4 8.2 22 5.8 3.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Carb_kinase PF01256.17 CTQ31051.1 - 2.5e-75 253.1 0.8 2.5e-75 253.1 0.8 1.5 2 0 0 2 2 2 1 Carbohydrate kinase YjeF_N PF03853.15 CTQ31051.1 - 3.4e-44 150.7 0.2 6.7e-44 149.8 0.2 1.5 1 0 0 1 1 1 1 YjeF-related protein N-terminus HK PF02110.15 CTQ31051.1 - 0.00059 19.3 0.5 0.001 18.5 0.5 1.3 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family acVLRF1 PF18859.1 CTQ31051.1 - 0.018 15.3 0.2 0.1 12.9 0.0 2.3 2 0 0 2 2 2 0 Actinobacteria/chloroflexi VLRF1 release factor TsaE PF02367.17 CTQ31052.1 - 2.8e-42 143.6 0.0 3.4e-42 143.4 0.0 1.0 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 CTQ31052.1 - 0.009 16.2 0.0 0.011 15.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 CTQ31052.1 - 0.025 15.0 0.0 0.036 14.4 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_22 PF13401.6 CTQ31052.1 - 0.031 14.6 0.0 0.042 14.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 CTQ31052.1 - 0.053 13.6 0.0 0.053 13.6 0.0 1.3 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_16 PF13191.6 CTQ31052.1 - 0.097 13.0 0.1 0.15 12.4 0.1 1.3 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 CTQ31052.1 - 0.14 12.0 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 NACHT domain PRK PF00485.18 CTQ31052.1 - 0.2 11.4 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.12 CTQ31052.1 - 0.22 10.8 0.0 0.48 9.7 0.0 1.5 2 0 0 2 2 2 0 Zeta toxin AAA_13 PF13166.6 CTQ31052.1 - 0.24 10.0 0.0 0.29 9.7 0.0 1.0 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 CTQ31052.1 - 0.26 11.0 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain Amidase_3 PF01520.18 CTQ31053.1 - 2.9e-49 167.5 0.0 4.6e-49 166.9 0.0 1.3 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase AMIN PF11741.8 CTQ31053.1 - 0.0019 18.3 0.4 0.0056 16.8 0.2 2.0 2 0 0 2 2 2 1 AMIN domain DNA_mis_repair PF01119.19 CTQ31054.1 - 9.5e-35 118.9 0.0 1.5e-34 118.2 0.0 1.3 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.11 CTQ31054.1 - 3.4e-26 91.8 0.3 6.8e-26 90.8 0.3 1.5 1 0 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.6 CTQ31054.1 - 2.3e-13 50.1 0.0 3.8e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 CTQ31054.1 - 9.5e-07 29.3 0.0 2.1e-06 28.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPPT PF01715.17 CTQ31055.1 - 2.3e-87 292.6 0.0 2.7e-87 292.3 0.0 1.0 1 0 0 1 1 1 1 IPP transferase IPT PF01745.16 CTQ31055.1 - 1.2e-05 24.8 0.0 0.00084 18.8 0.0 2.1 2 0 0 2 2 2 1 Isopentenyl transferase AAA_33 PF13671.6 CTQ31055.1 - 0.0005 20.3 0.0 0.0057 16.8 0.0 2.4 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 CTQ31055.1 - 0.0073 15.6 0.0 0.034 13.4 0.0 2.1 2 0 0 2 2 2 1 Zeta toxin AAA_16 PF13191.6 CTQ31055.1 - 0.0075 16.7 1.2 0.035 14.5 1.2 2.3 1 1 0 1 1 1 1 AAA ATPase domain TIP49 PF06068.13 CTQ31055.1 - 0.0078 15.5 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain Cytidylate_kin PF02224.18 CTQ31055.1 - 0.046 13.4 0.0 1 9.1 0.0 2.2 2 0 0 2 2 2 0 Cytidylate kinase PduV-EutP PF10662.9 CTQ31055.1 - 0.14 11.9 0.0 0.32 10.7 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Hfq PF17209.3 CTQ31056.1 - 4.2e-31 106.4 0.1 5.1e-31 106.1 0.1 1.1 1 0 0 1 1 1 1 Hfq protein LSM PF01423.22 CTQ31056.1 - 0.0029 17.2 0.0 0.0038 16.9 0.0 1.3 1 0 0 1 1 1 1 LSM domain GTP-bdg_N PF13167.6 CTQ31057.1 - 7e-31 106.7 0.0 1.6e-30 105.6 0.0 1.6 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal GTP-bdg_M PF16360.5 CTQ31057.1 - 2.2e-29 101.9 10.7 4.6e-29 100.8 10.7 1.6 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region MMR_HSR1 PF01926.23 CTQ31057.1 - 1.1e-20 73.8 0.1 3.9e-20 72.0 0.1 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CTQ31057.1 - 1.7e-07 30.9 0.0 2.8e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 CTQ31057.1 - 1.7e-06 28.0 0.1 0.047 13.6 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase Arf PF00025.21 CTQ31057.1 - 0.00013 21.5 1.3 0.0011 18.5 1.3 2.1 1 1 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 CTQ31057.1 - 0.00031 20.4 0.0 0.19 11.2 0.0 2.4 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain TniB PF05621.11 CTQ31057.1 - 0.0039 16.6 0.1 0.0073 15.7 0.1 1.4 1 0 0 1 1 1 1 Bacterial TniB protein MMR_HSR1_Xtn PF16897.5 CTQ31057.1 - 0.0071 16.4 0.0 0.017 15.1 0.0 1.6 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain SRPRB PF09439.10 CTQ31057.1 - 0.014 14.8 0.0 0.027 13.9 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Roc PF08477.13 CTQ31057.1 - 0.018 15.2 0.1 4.1 7.7 0.0 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 CTQ31057.1 - 0.03 13.5 0.1 0.51 9.4 0.0 2.2 2 0 0 2 2 2 0 G-protein alpha subunit Dynamin_N PF00350.23 CTQ31057.1 - 0.03 14.4 0.1 0.35 10.9 0.0 2.3 1 1 1 2 2 2 0 Dynamin family cobW PF02492.19 CTQ31057.1 - 0.037 13.6 2.6 1.2 8.7 0.5 2.4 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 CTQ31057.1 - 0.043 14.3 0.0 0.29 11.6 0.0 2.3 2 0 0 2 2 2 0 ABC transporter ATP_bind_1 PF03029.17 CTQ31057.1 - 0.047 13.5 0.6 0.16 11.8 0.1 1.7 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein Ras PF00071.22 CTQ31057.1 - 0.18 11.4 0.0 0.5 9.9 0.0 1.8 1 1 0 1 1 1 0 Ras family Band_7 PF01145.25 CTQ31058.1 - 2.8e-30 105.7 1.9 4.4e-30 105.0 1.9 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family HflK_N PF12221.8 CTQ31058.1 - 1.7e-15 56.7 12.9 4.8e-15 55.3 12.9 1.8 1 0 0 1 1 1 1 Bacterial membrane protein N terminal DivIVA PF05103.13 CTQ31058.1 - 0.063 13.4 2.4 0.12 12.5 2.4 1.4 1 0 0 1 1 1 0 DivIVA protein SCAB_CC PF16712.5 CTQ31058.1 - 0.14 12.0 1.6 0.26 11.1 1.6 1.4 1 0 0 1 1 1 0 Coiled-coil regions of plant-specific actin-binding protein Band_7 PF01145.25 CTQ31059.1 - 5e-34 117.8 1.0 7.7e-34 117.2 1.0 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family CCP_MauG PF03150.14 CTQ31059.1 - 0.066 13.9 0.6 0.13 12.9 0.5 1.7 2 1 0 2 2 2 0 Di-haem cytochrome c peroxidase Band_7_1 PF13421.6 CTQ31059.1 - 0.1 12.3 0.1 0.2 11.4 0.1 1.5 1 0 0 1 1 1 0 SPFH domain-Band 7 family MccV PF17508.2 CTQ31060.1 - 0.016 15.8 1.9 0.3 11.6 0.1 2.1 1 1 1 2 2 2 0 Microcin V bacteriocin DUF2065 PF09838.9 CTQ31061.1 - 4.9e-22 77.7 5.8 5.4e-22 77.6 5.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2065) Phenyl_P_gamma PF09662.10 CTQ31061.1 - 0.062 13.5 0.0 0.068 13.3 0.0 1.1 1 0 0 1 1 1 0 Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma) Adenylsucc_synt PF00709.21 CTQ31063.1 - 1.2e-177 591.0 0.0 1.4e-177 590.8 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Rrf2 PF02082.20 CTQ31064.1 - 4.5e-25 87.8 0.2 8.1e-25 87.0 0.1 1.4 2 0 0 2 2 2 1 Transcriptional regulator HTH_27 PF13463.6 CTQ31064.1 - 3.9e-05 24.1 0.1 0.00014 22.2 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain TrmB PF01978.19 CTQ31064.1 - 0.0005 19.9 0.5 0.0018 18.2 0.1 2.0 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 CTQ31064.1 - 0.014 15.6 0.1 0.025 14.8 0.1 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.21 CTQ31064.1 - 0.014 15.0 0.0 0.029 14.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 CTQ31064.1 - 0.018 15.0 0.0 0.044 13.7 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_36 PF13730.6 CTQ31064.1 - 0.028 14.4 0.0 0.057 13.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 CTQ31064.1 - 0.072 13.1 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain RNB PF00773.19 CTQ31065.1 - 1.4e-110 369.7 0.0 2e-110 369.1 0.0 1.2 1 0 0 1 1 1 1 RNB domain OB_RNB PF08206.11 CTQ31065.1 - 1.5e-28 98.2 10.0 4.5e-22 77.5 0.1 4.4 4 0 0 4 4 4 2 Ribonuclease B OB domain CSD2 PF17876.1 CTQ31065.1 - 1.5e-26 92.3 0.1 6.1e-24 84.0 0.0 2.7 2 0 0 2 2 2 1 Cold shock domain S1 PF00575.23 CTQ31065.1 - 2.4e-17 63.0 0.2 5e-17 62.0 0.2 1.6 1 0 0 1 1 1 1 S1 RNA binding domain HTH_12 PF08461.10 CTQ31065.1 - 3e-15 55.9 1.7 6.9e-15 54.8 1.7 1.7 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain RNase_II_C_S1 PF18614.1 CTQ31065.1 - 0.00015 21.6 0.2 0.0014 18.5 0.0 2.6 3 0 0 3 3 3 1 RNase II-type exonuclease C-terminal S1 domain MetOD2 PF18548.1 CTQ31065.1 - 0.015 15.4 0.5 0.04 14.0 0.5 1.7 1 0 0 1 1 1 0 Metanogen output domain 2 TFIIE_beta PF02186.15 CTQ31065.1 - 0.026 14.8 0.6 0.12 12.7 0.1 2.4 3 0 0 3 3 3 0 TFIIE beta subunit core domain OB_Dis3 PF17849.1 CTQ31065.1 - 0.096 12.7 0.0 0.24 11.5 0.0 1.6 1 0 0 1 1 1 0 Dis3-like cold-shock domain 2 (CSD2) RNA_pol_Rbc25 PF08292.12 CTQ31065.1 - 0.1 12.8 0.7 0.39 11.0 0.0 2.1 2 0 0 2 2 2 0 RNA polymerase III subunit Rpc25 Rho_RNA_bind PF07497.12 CTQ31065.1 - 0.11 12.3 0.0 0.44 10.4 0.0 2.0 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain Sucrose_synth PF00862.19 CTQ31065.1 - 0.18 10.1 0.0 0.27 9.5 0.0 1.2 1 0 0 1 1 1 0 Sucrose synthase SpoU_methylase PF00588.19 CTQ31066.1 - 2e-40 138.3 0.1 3.6e-40 137.4 0.0 1.4 2 0 0 2 2 2 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 CTQ31066.1 - 4.9e-20 71.6 0.2 3.9e-19 68.7 0.2 2.0 2 0 0 2 2 2 1 RNA 2'-O ribose methyltransferase substrate binding AAA_16 PF13191.6 CTQ31066.1 - 0.11 12.8 0.5 0.31 11.4 0.3 1.8 2 0 0 2 2 2 0 AAA ATPase domain AidB_N PF18158.1 CTQ31067.1 - 2e-57 193.5 0.0 6.1e-57 191.9 0.0 1.9 1 0 0 1 1 1 1 Adaptive response protein AidB N-terminal domain Acyl-CoA_dh_1 PF00441.24 CTQ31067.1 - 5.1e-28 98.2 0.7 5.1e-28 98.2 0.7 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 CTQ31067.1 - 2.5e-16 59.6 0.0 4e-16 59.0 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 CTQ31067.1 - 3.5e-08 33.8 1.6 2.9e-07 30.8 0.1 2.4 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain DUF1471 PF07338.13 CTQ31068.1 - 2.3e-19 69.1 0.1 3.9e-19 68.4 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF1471 PF07338.13 CTQ31069.1 - 1.3e-17 63.4 0.2 1.7e-17 63.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) Tom5 PF10642.9 CTQ31069.1 - 0.053 13.6 0.2 0.14 12.2 0.2 1.8 1 1 0 1 1 1 0 Mitochondrial import receptor subunit or translocase Peptidase_S9 PF00326.21 CTQ31071.1 - 2e-16 60.1 0.1 1.7e-15 57.1 0.1 2.0 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 CTQ31071.1 - 4.3e-16 58.9 0.1 2.5e-10 40.0 0.0 2.0 1 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 CTQ31071.1 - 5.1e-08 33.8 3.2 6.4e-08 33.5 3.2 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 CTQ31071.1 - 2.4e-07 30.7 0.5 0.00015 21.5 0.3 2.8 1 1 1 2 2 2 2 alpha/beta hydrolase fold DLH PF01738.18 CTQ31071.1 - 1.5e-06 27.9 0.0 2.3e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_2 PF02230.16 CTQ31071.1 - 2.2e-06 27.7 0.0 0.00052 19.9 0.0 2.9 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase PAF-AH_p_II PF03403.13 CTQ31071.1 - 1.1e-05 24.1 0.1 0.00021 20.0 0.0 2.0 2 0 0 2 2 2 1 Platelet-activating factor acetylhydrolase, isoform II Abhydrolase_5 PF12695.7 CTQ31071.1 - 1.6e-05 24.7 0.0 0.0044 16.8 0.0 2.6 3 0 0 3 3 3 1 Alpha/beta hydrolase family Esterase PF00756.20 CTQ31071.1 - 3.6e-05 23.5 0.0 4.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Chlorophyllase2 PF12740.7 CTQ31071.1 - 0.00031 19.8 0.0 0.00041 19.3 0.0 1.1 1 0 0 1 1 1 1 Chlorophyllase enzyme AXE1 PF05448.12 CTQ31071.1 - 0.0014 17.3 0.0 1.6 7.3 0.0 3.0 3 0 0 3 3 3 1 Acetyl xylan esterase (AXE1) Esterase_phd PF10503.9 CTQ31071.1 - 0.002 17.7 0.0 0.013 15.0 0.0 2.1 1 1 0 1 1 1 1 Esterase PHB depolymerase Chlorophyllase PF07224.11 CTQ31071.1 - 0.0022 17.1 0.0 0.0035 16.4 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase Peptidase_S15 PF02129.18 CTQ31071.1 - 0.041 13.5 0.1 0.073 12.6 0.1 1.6 1 1 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) BAAT_C PF08840.11 CTQ31071.1 - 0.13 12.1 0.0 0.66 9.9 0.0 1.9 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal DeoRC PF00455.22 CTQ31072.1 - 2e-36 125.3 0.0 2.7e-36 124.9 0.0 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 CTQ31072.1 - 8e-20 70.3 0.3 2.2e-19 69.0 0.1 1.8 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 CTQ31072.1 - 1.3e-06 28.3 0.2 3e-06 27.1 0.1 1.6 2 0 0 2 2 1 1 HTH domain AbiEi_4 PF13338.6 CTQ31072.1 - 0.00025 21.1 0.0 0.00058 20.0 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin HTH_29 PF13551.6 CTQ31072.1 - 0.00035 20.5 0.3 0.0013 18.7 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn helix Fe_dep_repress PF01325.19 CTQ31072.1 - 0.00039 20.6 0.0 0.00089 19.4 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 CTQ31072.1 - 0.0016 17.9 0.1 0.0085 15.6 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 CTQ31072.1 - 0.0043 17.1 0.0 0.016 15.3 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 CTQ31072.1 - 0.0053 16.6 0.3 0.011 15.7 0.1 1.7 2 0 0 2 2 2 1 MarR family HTH_17 PF12728.7 CTQ31072.1 - 0.0077 16.4 0.0 0.017 15.3 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Ribosomal_S25 PF03297.15 CTQ31072.1 - 0.0083 16.3 0.1 0.023 14.9 0.0 1.7 2 0 0 2 2 1 1 S25 ribosomal protein HTH_23 PF13384.6 CTQ31072.1 - 0.012 15.4 0.1 0.034 13.9 0.0 1.8 2 0 0 2 2 2 0 Homeodomain-like domain HTH_28 PF13518.6 CTQ31072.1 - 0.021 15.0 0.0 0.043 13.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 CTQ31072.1 - 0.021 14.6 0.0 0.068 13.0 0.0 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain TFIIE_alpha PF02002.17 CTQ31072.1 - 0.053 13.4 0.0 0.096 12.6 0.0 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_5 PF01022.20 CTQ31072.1 - 0.055 13.4 0.1 0.25 11.2 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family AbiEi_3_N PF17194.4 CTQ31072.1 - 0.059 13.4 0.3 0.2 11.7 0.0 2.0 2 1 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin N-terminal domain DUF4423 PF14394.6 CTQ31072.1 - 0.15 11.7 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Kelch_6 PF13964.6 CTQ31072.1 - 0.16 12.3 0.0 2.5 8.5 0.0 2.3 2 0 0 2 2 2 0 Kelch motif Replic_Relax PF13814.6 CTQ31072.1 - 0.18 11.9 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Replication-relaxation Lactamase_B_3 PF13483.6 CTQ31073.1 - 8.5e-15 55.0 0.0 1.1e-14 54.6 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 CTQ31073.1 - 6.7e-14 51.9 0.2 8.9e-14 51.5 0.2 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 CTQ31073.1 - 0.017 15.1 2.3 0.089 12.8 1.7 2.1 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily TM231 PF10149.9 CTQ31073.1 - 0.071 12.4 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 231 EIIC-GAT PF03611.14 CTQ31074.1 - 1.6e-121 406.1 45.6 1.6e-121 406.1 45.6 1.4 2 0 0 2 2 2 1 PTS system sugar-specific permease component Tweety PF04906.13 CTQ31074.1 - 0.028 13.1 2.3 0.057 12.1 2.3 1.6 1 0 0 1 1 1 0 Tweety PTS_IIB PF02302.17 CTQ31075.1 - 1.1e-13 51.7 0.1 1.3e-13 51.5 0.1 1.1 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit PNP_UDP_1 PF01048.20 CTQ31075.1 - 0.052 12.8 0.1 0.058 12.6 0.1 1.0 1 0 0 1 1 1 0 Phosphorylase superfamily PTS_EIIA_2 PF00359.22 CTQ31076.1 - 3e-32 111.5 0.0 3.4e-32 111.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Chlorophyllase2 PF12740.7 CTQ31076.1 - 0.13 11.2 0.0 0.16 10.9 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme OMPdecase PF00215.24 CTQ31077.1 - 1.4e-27 96.8 0.4 1.6e-27 96.6 0.4 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family QRPTase_C PF01729.19 CTQ31077.1 - 0.00059 19.7 0.0 0.43 10.3 0.0 2.1 2 0 0 2 2 2 2 Quinolinate phosphoribosyl transferase, C-terminal domain Me-amine-dh_H PF06433.11 CTQ31077.1 - 0.092 11.6 0.7 0.18 10.6 0.6 1.4 1 1 0 1 1 1 0 Methylamine dehydrogenase heavy chain (MADH) AP_endonuc_2 PF01261.24 CTQ31078.1 - 8.5e-35 120.1 0.0 1.3e-34 119.5 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Radical_SAM PF04055.21 CTQ31078.1 - 0.0057 17.0 0.0 0.7 10.3 0.0 2.8 2 1 0 2 2 2 1 Radical SAM superfamily HTH_Tnp_1 PF01527.20 CTQ31078.1 - 0.023 15.0 0.3 0.091 13.1 0.0 2.1 2 1 0 2 2 2 0 Transposase Rhabdo_NV PF02484.15 CTQ31078.1 - 0.11 12.6 0.0 8.1 6.7 0.0 2.3 2 0 0 2 2 2 0 Rhabdovirus Non-virion protein DPRP PF04244.13 CTQ31078.1 - 0.13 12.1 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Deoxyribodipyrimidine photo-lyase-related protein ComA PF02679.15 CTQ31078.1 - 0.18 11.3 0.0 0.68 9.3 0.0 1.9 1 1 1 2 2 2 0 (2R)-phospho-3-sulfolactate synthase (ComA) Aldolase_II PF00596.21 CTQ31079.1 - 3.2e-46 157.6 0.6 3.8e-46 157.4 0.6 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain MFS_1 PF07690.16 CTQ31080.1 - 1.3e-37 129.6 40.9 1.3e-22 80.3 12.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CTQ31080.1 - 2.3e-16 59.7 20.8 2.4e-08 33.3 12.4 2.1 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 CTQ31080.1 - 9.2e-10 37.9 16.8 1.4e-05 24.1 13.6 2.2 1 1 0 2 2 2 2 MFS_1 like family LacY_symp PF01306.19 CTQ31080.1 - 0.0067 15.3 13.5 0.035 12.9 0.1 3.4 2 1 1 3 3 3 2 LacY proton/sugar symporter Phage_r1t_holin PF16945.5 CTQ31080.1 - 0.056 13.6 0.0 0.24 11.6 0.0 2.1 1 0 0 1 1 1 0 Putative lactococcus lactis phage r1t holin MFS_3 PF05977.13 CTQ31080.1 - 0.13 10.6 16.5 0.12 10.7 0.5 2.3 2 0 0 2 2 2 0 Transmembrane secretion effector Tetraspanin PF00335.20 CTQ31080.1 - 0.22 11.2 0.1 0.22 11.2 0.1 2.7 2 1 0 3 3 3 0 Tetraspanin family Mlo PF03094.15 CTQ31080.1 - 0.44 8.8 2.6 0.37 9.1 0.7 1.7 2 0 0 2 2 2 0 Mlo family DUF1471 PF07338.13 CTQ31081.1 - 2.6e-16 59.3 0.0 4e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) Ribosomal_S6 PF01250.17 CTQ31082.1 - 5.1e-28 97.2 0.0 6.7e-28 96.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S6 DUF2313 PF10076.9 CTQ31082.1 - 0.044 13.7 0.0 0.31 10.9 0.0 1.9 1 1 1 2 2 2 0 Uncharacterised protein conserved in bacteria (DUF2313) SSB PF00436.25 CTQ31083.1 - 7.7e-11 42.0 0.0 8.2e-11 41.9 0.0 1.0 1 0 0 1 1 1 1 Single-strand binding protein family Ribosomal_S18 PF01084.20 CTQ31084.1 - 7.5e-25 86.9 0.5 9.8e-25 86.5 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein S18 Ribosomal_L9_C PF03948.14 CTQ31086.1 - 1.6e-24 86.2 2.0 2.4e-24 85.6 2.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L9, C-terminal domain Ribosomal_L9_N PF01281.19 CTQ31086.1 - 2.8e-22 78.0 0.4 6.5e-22 76.8 0.4 1.7 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain Cep57_MT_bd PF06657.13 CTQ31086.1 - 0.013 16.0 0.1 0.019 15.4 0.1 1.3 1 0 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 OapA PF04225.12 CTQ31087.1 - 5.9e-34 116.0 0.1 8.7e-34 115.5 0.1 1.2 1 0 0 1 1 1 1 Opacity-associated protein A LysM-like domain OapA_N PF08525.11 CTQ31087.1 - 3.8e-08 33.1 3.0 5.9e-08 32.5 3.0 1.3 1 0 0 1 1 1 1 Opacity-associated protein A N-terminal motif Csd3_N PF18059.1 CTQ31087.1 - 0.1 13.1 0.0 0.17 12.4 0.0 1.3 1 0 0 1 1 1 0 Csd3 N-terminal DUF4106 PF13388.6 CTQ31087.1 - 0.82 8.8 8.2 1 8.5 8.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) FKBP_C PF00254.28 CTQ31088.1 - 7.8e-27 93.4 0.0 1.5e-26 92.5 0.0 1.5 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_N PF01346.18 CTQ31088.1 - 1.1e-19 71.1 0.1 1.4e-19 70.8 0.1 1.1 1 0 0 1 1 1 1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AA_permease PF00324.21 CTQ31089.1 - 2.6e-120 402.2 46.2 2.9e-120 402.1 46.2 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 CTQ31089.1 - 4.3e-47 160.9 48.4 5.6e-47 160.5 48.4 1.0 1 0 0 1 1 1 1 Amino acid permease SLATT_1 PF18181.1 CTQ31089.1 - 3.5 7.6 4.7 5.3 7.0 2.2 2.6 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 Vpu PF00558.19 CTQ31089.1 - 4.9 7.0 6.0 1.3 8.8 0.1 2.6 2 0 0 2 2 2 0 Vpu protein Hemerythrin PF01814.23 CTQ31090.1 - 3.3e-27 95.7 0.5 5.2e-27 95.1 0.5 1.3 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain ScdA_N PF04405.14 CTQ31090.1 - 1.2e-19 69.7 0.0 2.1e-19 68.9 0.0 1.4 1 0 0 1 1 1 1 Domain of Unknown function (DUF542) EamA PF00892.20 CTQ31091.1 - 1.9e-19 70.2 28.2 3.2e-14 53.3 8.4 2.2 2 0 0 2 2 2 2 EamA-like transporter family DUF423 PF04241.15 CTQ31091.1 - 2.3 8.5 6.8 5.5 7.3 0.4 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF423) AraC_binding PF02311.19 CTQ31092.1 - 1.1e-22 80.4 0.8 1.1e-22 80.4 0.8 1.6 2 0 0 2 2 2 1 AraC-like ligand binding domain HTH_18 PF12833.7 CTQ31092.1 - 1.3e-20 73.5 1.5 2.9e-20 72.3 1.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ31092.1 - 4.9e-19 67.9 0.1 1.3e-08 34.8 0.0 3.1 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family NmrA PF05368.13 CTQ31093.1 - 1.9e-23 83.2 0.4 4.1e-23 82.2 0.5 1.4 2 0 0 2 2 2 1 NmrA-like family NAD_binding_10 PF13460.6 CTQ31093.1 - 9.3e-22 77.8 3.7 1.6e-21 77.0 3.7 1.4 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 CTQ31093.1 - 3.1e-06 26.4 0.1 8.3e-06 25.0 0.1 1.6 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 CTQ31093.1 - 6e-06 25.6 0.0 1e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 Male sterility protein TrkA_N PF02254.18 CTQ31093.1 - 3.1e-05 24.2 0.2 7.2e-05 23.0 0.2 1.7 1 0 0 1 1 1 1 TrkA-N domain Epimerase PF01370.21 CTQ31093.1 - 0.0003 20.3 0.2 0.00077 19.0 0.2 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 CTQ31093.1 - 0.074 12.2 0.1 1.4 7.9 0.1 2.6 2 1 0 2 2 2 0 Polysaccharide biosynthesis protein HxlR PF01638.17 CTQ31094.1 - 2.8e-31 107.2 0.0 4.9e-31 106.4 0.0 1.3 2 0 0 2 2 2 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 CTQ31094.1 - 0.02 14.7 0.0 0.076 12.9 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_34 PF13601.6 CTQ31094.1 - 0.03 14.5 0.0 0.039 14.1 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR PF01047.22 CTQ31094.1 - 0.033 14.1 0.0 0.063 13.2 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_12 PF08461.10 CTQ31094.1 - 0.083 12.9 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Chlorophyllase2 PF12740.7 CTQ31094.1 - 0.14 11.1 0.1 5.8 5.7 0.0 2.0 1 1 1 2 2 2 0 Chlorophyllase enzyme HTH_45 PF14947.6 CTQ31094.1 - 0.19 11.7 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix 5_nucleotid_C PF02872.18 CTQ31095.1 - 7.9e-23 81.4 0.0 2.2e-22 79.9 0.0 1.8 2 0 0 2 2 2 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 CTQ31095.1 - 2e-12 48.1 0.0 3.6e-12 47.2 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Inositol_P PF00459.25 CTQ31096.1 - 1.6e-50 172.2 0.0 1.9e-50 171.9 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 CTQ31096.1 - 0.086 12.3 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Fructose-1-6-bisphosphatase, N-terminal domain YtfJ_HI0045 PF09695.10 CTQ31097.1 - 5.9e-78 260.0 1.1 6.7e-78 259.8 1.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (YtfJ_HI0045) ATP-synt_10 PF05176.14 CTQ31097.1 - 0.0077 15.5 0.1 0.0095 15.2 0.1 1.3 1 1 0 1 1 1 1 ATP10 protein DUF4174 PF13778.6 CTQ31097.1 - 0.038 14.5 0.0 0.053 14.0 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4174) Pyridox_ox_2 PF12900.7 CTQ31097.1 - 0.044 13.8 0.0 0.077 13.0 0.0 1.4 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF1007 PF06226.13 CTQ31097.1 - 0.15 12.0 1.2 0.16 11.9 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1007) DUF1107 PF06526.12 CTQ31098.1 - 1.8e-29 101.4 0.4 2e-29 101.2 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1107) HTH_18 PF12833.7 CTQ31099.1 - 1.7e-22 79.5 0.0 3.5e-22 78.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 CTQ31099.1 - 1.1e-14 54.1 0.0 5.7e-06 26.3 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 CTQ31099.1 - 4.2e-13 49.4 0.3 7.1e-13 48.6 0.3 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain AraC_binding_2 PF14525.6 CTQ31099.1 - 0.02 14.6 0.1 0.047 13.4 0.0 1.5 2 0 0 2 2 2 0 AraC-binding-like domain Cupin_2 PF07883.11 CTQ31099.1 - 0.1 12.3 0.0 0.42 10.4 0.0 2.0 2 0 0 2 2 2 0 Cupin domain dCache_3 PF14827.6 CTQ31099.1 - 0.16 11.6 0.1 0.23 11.0 0.1 1.3 1 0 0 1 1 1 0 Double sensory domain of two-component sensor kinase Glyco_hydro_42 PF02449.15 CTQ31100.1 - 1.9e-78 264.4 6.0 2.4e-78 264.1 6.0 1.1 1 0 0 1 1 1 1 Beta-galactosidase Glyco_hydro_42M PF08532.10 CTQ31100.1 - 2.5e-29 102.3 0.0 4.8e-29 101.4 0.0 1.5 1 0 0 1 1 1 1 Beta-galactosidase trimerisation domain Glyco_hydro_35 PF01301.19 CTQ31100.1 - 9.9e-05 22.1 0.7 0.0002 21.1 0.7 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 35 Glyco_hydro_2_C PF02836.17 CTQ31100.1 - 0.00012 21.3 0.1 0.00085 18.5 0.1 2.2 1 1 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Cellulase PF00150.18 CTQ31100.1 - 0.00059 19.4 0.1 0.001 18.5 0.1 1.3 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Glyco_hydro_42C PF08533.10 CTQ31100.1 - 0.08 12.7 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain LacY_symp PF01306.19 CTQ31101.1 - 3e-137 457.7 34.3 3.7e-137 457.5 34.3 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1_like PF12832.7 CTQ31101.1 - 4.6e-20 71.8 30.5 5.6e-19 68.3 30.5 2.1 1 1 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 CTQ31101.1 - 3.7e-17 62.3 39.1 3.7e-17 62.3 39.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 CTQ31101.1 - 1.3e-07 30.6 28.4 4.8e-07 28.7 28.3 2.0 1 1 0 1 1 1 1 MFS/sugar transport protein DUF21 PF01595.20 CTQ31102.1 - 4.2e-40 137.3 4.1 7.9e-40 136.4 4.1 1.4 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 CTQ31102.1 - 1.4e-22 79.5 0.1 3.1e-22 78.4 0.1 1.6 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 CTQ31102.1 - 6.2e-06 26.6 1.5 0.0027 18.1 0.1 3.3 4 0 0 4 4 4 2 CBS domain PMSR PF01625.21 CTQ31103.1 - 5.9e-68 227.9 1.1 6.9e-68 227.6 1.1 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Metal_resist PF13801.6 CTQ31103.1 - 0.044 14.0 0.5 0.096 12.9 0.5 1.5 1 0 0 1 1 1 0 Heavy-metal resistance DUF4853 PF16145.5 CTQ31103.1 - 0.072 13.2 0.2 3.6 7.7 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4853) Bac_surface_Ag PF01103.23 CTQ31104.1 - 1e-33 117.3 3.9 2.1e-33 116.2 3.9 1.5 1 1 0 1 1 1 1 Surface antigen POTRA_TamA_1 PF17243.2 CTQ31104.1 - 6.5e-22 77.4 0.0 1.3e-21 76.5 0.0 1.5 1 0 0 1 1 1 1 POTRA domain TamA domain 1 POTRA PF07244.15 CTQ31104.1 - 3.6e-14 53.1 0.0 4e-09 36.9 0.0 3.5 3 0 0 3 3 3 2 Surface antigen variable number repeat TamB PF04357.13 CTQ31105.1 - 1.6e-68 231.7 21.1 1.4e-67 228.6 3.4 5.6 4 3 1 5 5 5 3 TamB, inner membrane protein subunit of TAM complex T2SSN PF01203.19 CTQ31105.1 - 0.00046 20.5 37.3 0.042 14.1 6.5 7.5 4 2 4 8 8 8 3 Type II secretion system (T2SS), protein N DUF2807 PF10988.8 CTQ31105.1 - 0.034 13.9 0.2 26 4.5 0.0 4.1 4 1 0 4 4 4 0 Putative auto-transporter adhesin, head GIN domain Bactofilin PF04519.13 CTQ31105.1 - 0.074 13.4 3.2 4.4 7.7 0.0 5.0 5 1 0 5 5 5 0 Polymer-forming cytoskeletal GGACT PF06094.12 CTQ31106.1 - 6.5e-24 84.9 0.2 7.3e-24 84.7 0.2 1.0 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like Pyrophosphatase PF00719.19 CTQ31108.1 - 1.2e-55 187.7 0.0 1.4e-55 187.5 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase InPase PF18823.1 CTQ31108.1 - 0.028 14.1 0.0 0.08 12.6 0.0 1.7 2 0 0 2 2 2 0 Inorganic Pyrophosphatase Peripla_BP_4 PF13407.6 CTQ31109.1 - 3.2e-43 148.1 8.8 4.1e-43 147.8 8.8 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 CTQ31109.1 - 1.8e-17 63.7 0.2 2.3e-17 63.4 0.2 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family ABC_sub_bind PF04392.12 CTQ31109.1 - 6.9e-08 32.1 1.7 0.00042 19.6 0.6 2.1 2 0 0 2 2 2 2 ABC transporter substrate binding protein Peripla_BP_6 PF13458.6 CTQ31109.1 - 6.2e-07 29.4 1.4 9.3e-07 28.8 1.4 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_3 PF13377.6 CTQ31109.1 - 4.9e-06 27.0 0.0 1.3e-05 25.5 0.0 1.7 2 0 0 2 2 2 1 Periplasmic binding protein-like domain PucR PF07905.11 CTQ31109.1 - 0.026 14.8 0.0 0.056 13.7 0.0 1.5 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family ABC_tran PF00005.27 CTQ31110.1 - 3.1e-52 176.7 0.0 2.9e-31 108.8 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CTQ31110.1 - 1.9e-13 50.9 3.8 0.00027 20.9 0.1 3.1 2 1 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 CTQ31110.1 - 4.2e-05 23.2 0.0 0.00011 21.9 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 CTQ31110.1 - 7.7e-05 22.5 0.1 0.00052 19.8 0.1 2.4 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.19 CTQ31110.1 - 9e-05 22.0 1.2 0.28 10.6 0.0 2.9 3 1 0 4 4 4 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CTQ31110.1 - 0.00034 21.2 0.0 0.00054 20.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ31110.1 - 0.00037 20.9 0.3 0.0039 17.6 0.1 2.5 2 1 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 CTQ31110.1 - 0.00039 20.4 0.0 0.00075 19.4 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase ABC_ATPase PF09818.9 CTQ31110.1 - 0.00091 18.1 3.2 0.78 8.5 0.1 3.6 3 1 0 3 3 3 2 Predicted ATPase of the ABC class AAA_22 PF13401.6 CTQ31110.1 - 0.001 19.3 0.9 0.001 19.3 0.9 2.9 3 1 0 3 3 2 1 AAA domain MMR_HSR1 PF01926.23 CTQ31110.1 - 0.01 15.9 0.0 0.029 14.5 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF2813 PF11398.8 CTQ31110.1 - 0.012 14.9 0.1 0.023 14.0 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) SbcCD_C PF13558.6 CTQ31110.1 - 0.012 15.8 0.1 5.2 7.4 0.1 3.0 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 CTQ31110.1 - 0.014 15.1 0.0 0.089 12.5 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA_13 PF13166.6 CTQ31110.1 - 0.017 13.8 0.3 1.4 7.5 0.1 2.0 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 CTQ31110.1 - 0.053 13.5 0.6 0.81 9.7 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 CTQ31110.1 - 0.073 12.8 0.7 2.9 7.6 0.0 2.6 3 0 0 3 3 3 0 IstB-like ATP binding protein FeoB_N PF02421.18 CTQ31110.1 - 0.1 12.1 0.2 0.99 8.9 0.0 2.1 2 0 0 2 2 2 0 Ferrous iron transport protein B DUF815 PF05673.13 CTQ31110.1 - 0.11 11.7 0.0 0.2 10.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DLIC PF05783.11 CTQ31110.1 - 0.13 11.1 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_27 PF13514.6 CTQ31110.1 - 0.2 11.2 0.2 0.67 9.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 CTQ31110.1 - 3 8.3 4.9 4.3 7.8 0.9 2.6 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) BPD_transp_2 PF02653.16 CTQ31111.1 - 8.7e-49 166.1 45.1 1.1e-48 165.7 45.1 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 CTQ31112.1 - 5.1e-42 143.9 45.5 7.6e-42 143.3 45.5 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component FBPase PF00316.20 CTQ31113.1 - 5.3e-85 283.7 0.2 6.8e-85 283.3 0.2 1.1 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Mur_ligase PF01225.25 CTQ31114.1 - 6.4e-20 71.3 0.0 2.2e-19 69.6 0.0 1.9 2 0 0 2 2 2 1 Mur ligase family, catalytic domain Mur_ligase_M PF08245.12 CTQ31114.1 - 8.2e-18 65.1 0.0 1.1e-17 64.6 0.0 1.2 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 CTQ31114.1 - 2.5e-10 40.4 0.1 8.5e-10 38.8 0.0 2.0 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Acetyltransf_10 PF13673.7 CTQ31115.1 - 1.7e-09 37.7 0.0 2.3e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CTQ31115.1 - 3.3e-09 37.0 0.1 4.7e-09 36.5 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ31115.1 - 8.8e-09 35.7 0.0 1.4e-08 35.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ31115.1 - 0.021 14.8 0.0 0.046 13.7 0.0 1.6 1 1 0 1 1 1 0 FR47-like protein Acetyltransf_CG PF14542.6 CTQ31115.1 - 0.046 13.8 0.2 0.1 12.7 0.0 1.7 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase DUF4432 PF14486.6 CTQ31116.1 - 3.9e-113 377.2 0.0 4.7e-113 377.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4432) DUF4232 PF14016.6 CTQ31116.1 - 0.067 13.3 0.2 0.54 10.4 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4232) LPAM_1 PF08139.12 CTQ31116.1 - 0.41 11.2 1.6 0.78 10.4 1.6 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF615 PF04751.14 CTQ31117.1 - 1.3e-56 190.8 8.2 1.6e-56 190.6 8.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF615) RICH PF05062.12 CTQ31117.1 - 0.0067 16.7 1.3 0.014 15.7 0.4 2.0 1 1 0 1 1 1 1 RICH domain EntA_Immun PF08951.10 CTQ31117.1 - 0.02 15.3 0.6 0.34 11.3 0.1 2.4 2 0 0 2 2 2 0 Enterocin A Immunity Birna_RdRp PF04197.12 CTQ31117.1 - 0.087 11.1 0.6 0.1 10.9 0.6 1.0 1 0 0 1 1 1 0 Birnavirus RNA dependent RNA polymerase (VP1) Tox-REase-7 PF15649.6 CTQ31117.1 - 0.11 12.9 0.3 0.7 10.2 0.2 2.0 2 0 0 2 2 2 0 Restriction endonuclease fold toxin 7 DUF1266 PF06889.11 CTQ31117.1 - 0.28 11.2 1.3 2.4 8.2 1.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1266) Wbp11 PF09429.10 CTQ31117.1 - 6.3 7.3 11.8 0.17 12.3 3.4 2.5 2 1 1 3 3 3 0 WW domain binding protein 11 HSCB_C PF07743.13 CTQ31117.1 - 9.6 6.8 8.3 15 6.2 1.1 3.0 1 1 2 3 3 3 0 HSCB C-terminal oligomerisation domain PmbA_TldD PF01523.16 CTQ31118.1 - 1.4e-61 208.8 0.0 2.3e-61 208.1 0.0 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Cytochrom_B562 PF07361.11 CTQ31119.1 - 3.6e-32 111.1 4.5 4.2e-32 110.8 4.5 1.1 1 0 0 1 1 1 1 Cytochrome b562 SMBP PF16785.5 CTQ31119.1 - 0.0099 16.1 4.6 0.013 15.7 4.6 1.1 1 0 0 1 1 1 1 Small metal-binding protein PSII_Pbs27 PF13326.6 CTQ31119.1 - 0.028 14.7 2.9 0.065 13.6 2.9 1.6 1 1 0 1 1 1 0 Photosystem II Pbs27 LUC7 PF03194.15 CTQ31119.1 - 0.032 13.9 1.2 0.036 13.7 1.2 1.1 1 0 0 1 1 1 0 LUC7 N_terminus PRD PF00874.20 CTQ31120.1 - 0.00036 20.8 0.0 0.00051 20.3 0.0 1.3 1 0 0 1 1 1 1 PRD domain PilJ PF13675.6 CTQ31120.1 - 0.028 14.4 0.1 0.047 13.7 0.1 1.3 1 0 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term Gly_rich_SFCGS PF14272.6 CTQ31121.1 - 6.6e-60 200.1 6.1 7.4e-60 199.9 6.1 1.0 1 0 0 1 1 1 1 Glycine-rich SFCGS LacAB_rpiB PF02502.18 CTQ31121.1 - 0.0061 16.6 0.2 0.0086 16.1 0.2 1.3 1 1 0 1 1 1 1 Ribose/Galactose Isomerase DUF1685 PF07939.11 CTQ31121.1 - 0.17 11.7 0.1 0.27 11.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) DUF4312 PF14189.6 CTQ31122.1 - 8.6e-35 118.6 1.1 9.9e-35 118.4 1.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4312) DUF4152 PF13680.6 CTQ31122.1 - 0.12 11.8 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4152) DUF4311 PF14188.6 CTQ31123.1 - 3.6e-123 409.3 10.7 4.6e-123 408.9 10.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4311) DUF2232 PF09991.9 CTQ31123.1 - 0.001 18.4 3.6 0.001 18.4 3.6 1.9 2 0 0 2 2 2 1 Predicted membrane protein (DUF2232) LrgA PF03788.14 CTQ31123.1 - 0.17 11.9 7.0 2.5 8.1 0.5 2.4 2 0 0 2 2 2 0 LrgA family DUF4310 PF14187.6 CTQ31124.1 - 8e-108 358.9 26.7 9.2e-108 358.7 26.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4310) Amidohydro_1 PF01979.20 CTQ31125.1 - 2.9e-10 40.0 0.1 4.7e-08 32.7 0.1 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 CTQ31125.1 - 2.3e-06 27.4 0.1 0.00095 18.7 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family MarR_2 PF12802.7 CTQ31125.1 - 0.082 12.8 2.1 0.36 10.8 0.2 2.8 3 0 0 3 3 3 0 MarR family SelA PF03841.13 CTQ31126.1 - 6.4e-14 51.7 2.1 5.9e-13 48.5 2.1 2.2 1 1 0 1 1 1 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.20 CTQ31126.1 - 1.2e-07 30.6 0.1 1.7e-06 26.8 0.0 2.1 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 CTQ31126.1 - 9.3e-06 25.1 3.5 1.5e-05 24.5 3.5 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 CTQ31126.1 - 0.00029 20.3 1.7 0.00045 19.6 1.7 1.4 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family KDGP_aldolase PF07071.11 CTQ31127.1 - 2.2e-109 364.3 0.1 2.6e-109 364.1 0.1 1.0 1 0 0 1 1 1 1 KDGP aldolase Aldolase PF01081.19 CTQ31127.1 - 0.037 13.4 0.0 0.055 12.9 0.0 1.4 1 0 0 1 1 1 0 KDPG and KHG aldolase Arabinose_bd PF12625.7 CTQ31127.1 - 0.088 12.9 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Arabinose-binding domain of AraC transcription regulator, N-term Lactonase PF10282.9 CTQ31128.1 - 4e-102 342.0 0.0 4.6e-102 341.8 0.0 1.0 1 0 0 1 1 1 1 Lactonase, 7-bladed beta-propeller SGL PF08450.12 CTQ31128.1 - 3.4e-09 36.7 0.1 0.00079 19.1 0.0 4.1 2 2 0 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 CTQ31128.1 - 1.9e-06 28.0 0.0 0.054 13.7 0.0 4.5 5 0 0 5 5 5 1 Arylesterase DUF1513 PF07433.11 CTQ31128.1 - 1.3e-05 24.4 0.1 0.00041 19.5 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1513) PepSY PF03413.19 CTQ31128.1 - 0.011 16.3 0.0 0.35 11.5 0.0 2.7 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain NHL PF01436.21 CTQ31128.1 - 0.05 13.7 0.0 2.3 8.4 0.0 3.4 3 0 0 3 3 3 0 NHL repeat Big_9 PF17963.1 CTQ31128.1 - 0.11 13.3 1.8 53 4.6 0.0 4.4 3 3 2 5 5 5 0 Bacterial Ig domain PRD PF00874.20 CTQ31129.1 - 5.5e-22 77.9 0.0 2.5e-19 69.4 0.1 2.9 2 0 0 2 2 2 1 PRD domain PTS_EIIA_2 PF00359.22 CTQ31129.1 - 6.9e-19 68.2 0.1 2.1e-18 66.6 0.0 1.8 2 0 0 2 2 2 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Mga PF05043.13 CTQ31129.1 - 1.9e-16 60.4 0.4 4.3e-11 43.2 0.0 3.1 3 0 0 3 3 3 2 Mga helix-turn-helix domain HTH_11 PF08279.12 CTQ31129.1 - 3.7e-14 52.4 0.2 7.7e-10 38.6 0.1 2.5 2 0 0 2 2 2 2 HTH domain HTH_DeoR PF08220.12 CTQ31129.1 - 1.3e-05 24.9 1.5 0.0012 18.5 0.3 2.8 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_Mga PF08280.11 CTQ31129.1 - 2.1e-05 24.4 0.2 0.0075 16.3 0.0 3.0 3 0 0 3 3 3 1 M protein trans-acting positive regulator (MGA) HTH domain PuR_N PF09182.10 CTQ31129.1 - 0.013 15.4 0.1 1.1 9.2 0.0 2.5 2 0 0 2 2 2 0 Bacterial purine repressor, N-terminal Glyco_hydro_4 PF02056.16 CTQ31129.1 - 0.018 14.6 0.1 0.64 9.5 0.0 2.4 2 0 0 2 2 2 0 Family 4 glycosyl hydrolase HTH_24 PF13412.6 CTQ31129.1 - 0.021 14.4 0.1 0.06 12.9 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 CTQ31129.1 - 0.032 13.9 0.0 0.08 12.6 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 Sigma70_r4 PF04545.16 CTQ31129.1 - 0.04 13.5 0.1 0.14 11.7 0.1 1.9 1 0 0 1 1 1 0 Sigma-70, region 4 GntR PF00392.21 CTQ31129.1 - 0.069 12.8 0.1 0.7 9.6 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family DprA_WH PF17782.1 CTQ31129.1 - 0.12 12.6 0.3 0.12 12.6 0.3 2.0 2 0 0 2 2 2 0 DprA winged helix domain RelB PF04221.12 CTQ31130.1 - 3.2e-14 52.6 0.1 3.4e-14 52.6 0.1 1.0 1 0 0 1 1 1 1 RelB antitoxin FAM180 PF15173.6 CTQ31130.1 - 0.092 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 FAM180 family ParE_toxin PF05016.15 CTQ31131.1 - 2.3e-10 41.0 0.1 2.7e-10 40.7 0.1 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE ParE-like_toxin PF15781.5 CTQ31131.1 - 3.7e-08 33.2 0.0 4.6e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 ParE-like toxin of type II bacterial toxin-antitoxin system Fer4_12 PF13353.6 CTQ31132.1 - 1.9e-51 174.0 0.0 2.2e-51 173.8 0.0 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 CTQ31132.1 - 4.1e-35 120.5 0.0 5e-35 120.2 0.0 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 CTQ31132.1 - 0.00041 20.8 0.0 0.00047 20.6 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily NRDD PF13597.6 CTQ31133.1 - 2.4e-182 607.7 0.0 2.9e-182 607.4 0.0 1.1 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Gly_radical PF01228.21 CTQ31133.1 - 1.6e-27 96.1 0.0 7.1e-27 94.0 0.0 2.1 3 0 0 3 3 3 1 Glycine radical ATP-cone PF03477.16 CTQ31133.1 - 2.8e-22 79.1 0.4 4.3e-21 75.3 0.2 2.4 2 0 0 2 2 2 1 ATP cone domain UvrA_inter PF17760.1 CTQ31133.1 - 0.014 15.5 0.0 0.033 14.3 0.0 1.6 1 0 0 1 1 1 0 UvrA interaction domain OrfB_Zn_ribbon PF07282.11 CTQ31133.1 - 0.1 12.5 1.3 0.27 11.2 1.3 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Anti-TRAP PF15777.5 CTQ31133.1 - 0.15 12.0 1.6 0.35 10.9 1.6 1.5 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF4051 PF13260.6 CTQ31133.1 - 0.18 11.5 0.6 0.44 10.3 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) NOB1_Zn_bind PF08772.11 CTQ31133.1 - 0.44 10.7 3.2 0.96 9.7 3.2 1.5 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like HypA PF01155.19 CTQ31133.1 - 2.1 8.4 4.5 2 8.4 1.8 2.2 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HTH_6 PF01418.17 CTQ31134.1 - 5.1e-13 48.8 0.0 9.3e-13 48.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 CTQ31134.1 - 0.0005 19.9 0.1 0.00083 19.2 0.1 1.4 1 0 0 1 1 1 1 SIS domain MarR PF01047.22 CTQ31134.1 - 0.015 15.2 0.0 0.034 14.1 0.0 1.6 1 0 0 1 1 1 0 MarR family TetR_N PF00440.23 CTQ31134.1 - 0.036 13.9 0.2 0.077 12.8 0.2 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family SIS_2 PF13580.6 CTQ31134.1 - 0.039 14.0 0.2 0.11 12.5 0.1 1.7 1 1 1 2 2 2 0 SIS domain LacI PF00356.21 CTQ31134.1 - 0.049 13.4 0.1 0.097 12.5 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family HTH_Crp_2 PF13545.6 CTQ31134.1 - 0.07 13.1 0.1 0.27 11.2 0.1 2.0 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain AdoMet_dc PF02675.15 CTQ31134.1 - 0.087 13.1 0.2 6.7 7.0 0.0 2.3 1 1 1 2 2 2 0 S-adenosylmethionine decarboxylase Bunya_G2 PF03563.13 CTQ31134.1 - 0.13 11.5 0.1 0.17 11.1 0.1 1.1 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 PTS_IIB PF02302.17 CTQ31135.1 - 1.3e-20 73.9 0.4 1.4e-20 73.7 0.4 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF4982 PF16355.5 CTQ31135.1 - 0.024 14.6 0.2 0.031 14.2 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4982) Glyco_hydro_4 PF02056.16 CTQ31136.1 - 1e-52 178.3 0.1 1.7e-52 177.7 0.1 1.3 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Glyco_hydro_4C PF11975.8 CTQ31136.1 - 1.2e-48 166.0 0.0 2.3e-48 165.0 0.0 1.5 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain Ldh_1_N PF00056.23 CTQ31136.1 - 0.014 15.5 0.2 0.14 12.3 0.0 2.5 3 0 0 3 3 3 0 lactate/malate dehydrogenase, NAD binding domain PTS_EIIC PF02378.18 CTQ31137.1 - 4.7e-60 203.3 28.7 4.7e-60 203.3 28.7 1.3 2 0 0 2 2 2 1 Phosphotransferase system, EIIC DUF2061 PF09834.9 CTQ31137.1 - 0.0075 16.8 5.1 0.49 10.9 0.2 3.4 3 0 0 3 3 3 2 Predicted membrane protein (DUF2061) Alpha-amylase PF00128.24 CTQ31138.1 - 6.6e-126 420.4 0.1 9.4e-126 419.9 0.1 1.2 1 0 0 1 1 1 1 Alpha amylase, catalytic domain DUF3459 PF11941.8 CTQ31138.1 - 8.7e-12 45.2 0.7 1.1e-09 38.5 0.6 2.8 2 0 0 2 2 2 1 Domain of unknown function (DUF3459) Malt_amylase_C PF16657.5 CTQ31138.1 - 4.7e-05 23.4 0.0 9.8e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 Maltogenic Amylase, C-terminal domain hDGE_amylase PF14701.6 CTQ31138.1 - 0.0023 17.1 0.0 0.0035 16.5 0.0 1.1 1 0 0 1 1 1 1 Glycogen debranching enzyme, glucanotransferase domain PTS_EIIC PF02378.18 CTQ31139.1 - 9.3e-33 113.6 25.9 1.7e-32 112.8 25.9 1.4 1 0 0 1 1 1 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 CTQ31139.1 - 1.5e-12 46.8 0.1 2.7e-12 45.9 0.1 1.5 1 0 0 1 1 1 1 phosphotransferase system, EIIB LacI PF00356.21 CTQ31140.1 - 2.2e-21 75.4 0.1 4.8e-21 74.3 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_3 PF13377.6 CTQ31140.1 - 2.7e-18 66.9 0.4 6.5e-18 65.6 0.2 1.8 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 CTQ31140.1 - 5.3e-12 45.7 0.0 1.1e-11 44.7 0.0 1.6 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family HTH_31 PF13560.6 CTQ31140.1 - 0.00034 20.9 0.1 0.00099 19.4 0.1 1.9 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 CTQ31140.1 - 0.00036 20.5 0.1 0.00091 19.2 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix HTH_23 PF13384.6 CTQ31140.1 - 0.0015 18.2 0.1 0.0052 16.5 0.0 2.0 1 1 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.10 CTQ31140.1 - 0.002 17.9 0.0 0.0053 16.5 0.0 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 CTQ31140.1 - 0.0031 17.4 0.1 0.032 14.1 0.0 2.4 2 0 0 2 2 2 1 MarR family HTH_7 PF02796.15 CTQ31140.1 - 0.0058 16.7 0.0 0.018 15.1 0.0 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_Tnp_ISL3 PF13542.6 CTQ31140.1 - 0.011 15.1 0.0 0.026 13.9 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Peripla_BP_4 PF13407.6 CTQ31140.1 - 0.011 15.3 0.1 0.11 12.0 0.1 2.2 2 0 0 2 2 2 0 Periplasmic binding protein domain CENP-B_N PF04218.13 CTQ31140.1 - 0.023 14.3 0.0 0.062 12.9 0.0 1.7 1 1 0 1 1 1 0 CENP-B N-terminal DNA-binding domain HTH_AraC PF00165.23 CTQ31140.1 - 0.05 13.7 0.0 0.16 12.1 0.0 1.9 2 0 0 2 2 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family AAA_18 PF13238.6 CTQ31140.1 - 0.054 14.0 0.0 0.11 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain HTH_38 PF13936.6 CTQ31140.1 - 0.058 13.2 0.0 0.19 11.5 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HHH PF00633.23 CTQ31140.1 - 0.06 13.2 0.0 0.34 10.9 0.0 2.2 2 0 0 2 2 2 0 Helix-hairpin-helix motif HTH_Crp_2 PF13545.6 CTQ31140.1 - 0.074 13.0 0.1 0.16 11.9 0.1 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain RsgA_GTPase PF03193.16 CTQ31140.1 - 0.076 12.9 0.2 8 6.3 0.2 2.5 1 1 1 2 2 2 0 RsgA GTPase HTH_28 PF13518.6 CTQ31140.1 - 0.083 13.0 0.0 1.5 9.0 0.0 2.7 1 1 1 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 CTQ31140.1 - 0.088 12.7 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 CTQ31140.1 - 0.095 12.6 0.1 0.25 11.3 0.0 1.8 2 0 0 2 2 1 0 MarR family HTH_36 PF13730.6 CTQ31140.1 - 0.16 12.0 0.0 0.38 10.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain TetR_N PF00440.23 CTQ31140.1 - 0.16 11.8 0.4 2 8.3 0.0 2.9 4 0 0 4 4 4 0 Bacterial regulatory proteins, tetR family HTH_24 PF13412.6 CTQ31140.1 - 0.19 11.3 0.1 0.4 10.3 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MGTL PF17059.5 CTQ31141.1 - 6.9e-05 22.4 1.6 0.0001 21.9 1.6 1.3 1 0 0 1 1 1 1 MgtA leader peptide E1-E2_ATPase PF00122.20 CTQ31142.1 - 4.5e-45 153.4 0.1 4.5e-45 153.4 0.1 3.2 3 1 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 CTQ31142.1 - 1.7e-18 67.7 6.0 3.7e-18 66.6 6.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 CTQ31142.1 - 2.8e-15 55.7 0.0 5.9e-15 54.7 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase_C PF00689.21 CTQ31142.1 - 7.2e-14 51.9 11.0 7.2e-14 51.9 11.0 2.0 2 1 0 2 2 2 1 Cation transporting ATPase, C-terminus Cation_ATPase PF13246.6 CTQ31142.1 - 3.3e-08 33.5 0.0 6.9e-08 32.5 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 CTQ31142.1 - 0.00017 21.4 0.0 0.048 13.4 0.0 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase COX7C PF02935.16 CTQ31142.1 - 0.00028 21.1 0.3 0.0012 19.1 0.3 2.1 2 0 0 2 2 2 1 Cytochrome c oxidase subunit VIIc HAD PF12710.7 CTQ31142.1 - 0.0019 18.7 0.1 0.004 17.6 0.1 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Ribonuc_L-PSP PF01042.21 CTQ31143.1 - 2e-44 150.5 0.5 2.2e-44 150.3 0.5 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP YjgF_endoribonc PF14588.6 CTQ31143.1 - 0.056 13.6 0.1 0.13 12.4 0.1 1.7 1 1 0 1 1 1 0 YjgF/chorismate_mutase-like, putative endoribonuclease PyrI PF01948.18 CTQ31144.1 - 9.5e-31 105.9 0.0 1.3e-30 105.5 0.0 1.2 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 CTQ31144.1 - 7.4e-18 64.2 1.2 1.2e-17 63.5 1.2 1.4 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.21 CTQ31145.1 - 9.2e-48 162.0 0.0 2.4e-47 160.6 0.0 1.7 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 CTQ31145.1 - 1.6e-28 99.8 0.0 2.4e-28 99.2 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DUF386 PF04074.12 CTQ31146.1 - 5.3e-45 153.0 0.0 5.9e-45 152.8 0.0 1.0 1 0 0 1 1 1 1 YhcH/YjgK/YiaL Cupin_2 PF07883.11 CTQ31146.1 - 0.0043 16.7 0.0 0.013 15.2 0.0 1.9 2 1 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 CTQ31146.1 - 0.015 14.9 0.0 0.019 14.5 0.0 1.1 1 0 0 1 1 1 0 Cupin OTCace PF00185.24 CTQ31147.1 - 5.6e-54 182.5 0.1 1.2e-53 181.3 0.1 1.5 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 CTQ31147.1 - 4.2e-49 166.4 0.0 6.5e-49 165.7 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IFRD PF05004.13 CTQ31147.1 - 0.018 14.1 0.0 0.027 13.6 0.0 1.3 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) RraB PF06877.11 CTQ31148.1 - 9.3e-35 119.4 1.1 1.5e-34 118.8 1.1 1.3 1 0 0 1 1 1 1 Regulator of ribonuclease activity B Pathogen_betaC1 PF09593.10 CTQ31148.1 - 0.12 12.3 0.1 0.17 11.9 0.1 1.1 1 0 0 1 1 1 0 Beta-satellite pathogenicity beta C1 protein Ag332 PF04671.12 CTQ31148.1 - 3.6 7.6 9.7 1.7 8.6 0.2 3.7 3 0 0 3 3 3 0 Erythrocyte membrane-associated giant protein antigen 332 MiaE PF06175.11 CTQ31149.1 - 3.1e-112 374.0 0.3 3.5e-112 373.8 0.3 1.0 1 0 0 1 1 1 1 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) Acetyltransf_1 PF00583.25 CTQ31150.1 - 3.6e-15 56.2 0.0 4.4e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CTQ31150.1 - 2.4e-11 43.9 0.1 3.7e-11 43.3 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CTQ31150.1 - 1.2e-10 41.4 0.0 1.4e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 CTQ31150.1 - 5.6e-07 30.3 0.0 7.4e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 CTQ31150.1 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 CTQ31150.1 - 1.6e-05 25.1 0.0 1.9e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CTQ31150.1 - 0.00076 19.4 0.0 0.0017 18.3 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 CTQ31150.1 - 0.012 15.6 0.0 0.051 13.7 0.0 1.9 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain tRNA-synt_1 PF00133.22 CTQ31151.1 - 3.2e-233 775.4 1.0 4e-232 771.8 1.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 CTQ31151.1 - 1.4e-42 145.2 0.0 5.2e-42 143.4 0.0 1.9 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 CTQ31151.1 - 2.3e-18 66.1 0.3 1.1e-07 30.9 0.1 4.7 4 1 0 4 4 4 3 tRNA synthetases class I (M) Val_tRNA-synt_C PF10458.9 CTQ31151.1 - 1.2e-16 60.7 5.7 2.8e-16 59.5 5.7 1.6 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1_2 PF13603.6 CTQ31151.1 - 8.2e-09 35.2 0.0 2.1e-06 27.4 0.0 2.4 1 1 1 2 2 2 2 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 CTQ31151.1 - 0.04 12.8 0.0 0.074 12.0 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (K) ABC_tran_CTD PF16326.5 CTQ31151.1 - 0.14 12.4 3.6 0.4 11.0 3.6 1.7 1 0 0 1 1 1 0 ABC transporter C-terminal domain tRNA-synt_1b PF00579.25 CTQ31151.1 - 8.6 5.6 6.1 0.43 9.9 0.1 1.8 3 0 0 3 3 3 0 tRNA synthetases class I (W and Y) DNA_pol3_chi PF04364.13 CTQ31152.1 - 5.6e-41 139.9 0.0 6.3e-41 139.7 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase III chi subunit, HolC Peptidase_M17 PF00883.21 CTQ31153.1 - 1.1e-122 409.2 0.1 1.8e-122 408.5 0.1 1.3 2 0 0 2 2 2 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 CTQ31153.1 - 2.7e-34 117.7 0.0 9.4e-34 116.0 0.0 2.0 2 0 0 2 2 2 1 Cytosol aminopeptidase family, N-terminal domain LptF_LptG PF03739.14 CTQ31154.1 - 4.6e-73 246.1 5.8 5.4e-73 245.9 5.8 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG Claudin_2 PF13903.6 CTQ31154.1 - 0.018 14.8 1.3 0.093 12.5 0.4 2.2 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction LptF_LptG PF03739.14 CTQ31155.1 - 2.5e-73 247.0 5.7 2.8e-73 246.8 5.7 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG DUF853 PF05872.12 CTQ31156.1 - 1.9e-247 821.8 0.2 2.2e-247 821.6 0.2 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF853) DUF87 PF01935.17 CTQ31156.1 - 1.6e-06 28.4 0.0 2.7e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain TrwB_AAD_bind PF10412.9 CTQ31156.1 - 7.9e-06 25.0 0.1 0.00025 20.1 0.1 2.1 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_10 PF12846.7 CTQ31156.1 - 8e-06 25.0 0.0 0.0085 15.0 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 CTQ31156.1 - 1.1e-05 25.8 0.2 0.0015 18.8 0.1 2.5 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 CTQ31156.1 - 1.1e-05 25.5 0.0 0.0057 16.7 0.0 2.4 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit AAA PF00004.29 CTQ31156.1 - 7.6e-05 23.1 0.0 0.044 14.2 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CTQ31156.1 - 0.00051 20.5 1.6 0.024 15.0 1.2 2.7 1 1 0 1 1 1 1 AAA ATPase domain FtsK_SpoIIIE PF01580.18 CTQ31156.1 - 0.00051 19.5 0.1 0.0024 17.2 0.0 2.0 2 0 0 2 2 2 1 FtsK/SpoIIIE family DUF2075 PF09848.9 CTQ31156.1 - 0.00063 19.1 0.2 0.43 9.8 0.1 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Zot PF05707.12 CTQ31156.1 - 0.0012 18.6 0.0 0.012 15.3 0.0 2.0 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_30 PF13604.6 CTQ31156.1 - 0.0013 18.5 1.1 0.0021 17.8 0.2 1.7 2 0 0 2 2 1 1 AAA domain AAA_19 PF13245.6 CTQ31156.1 - 0.0035 17.7 0.0 0.0074 16.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 CTQ31156.1 - 0.0065 16.5 0.0 0.017 15.2 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_7 PF12775.7 CTQ31156.1 - 0.0066 16.0 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region SRP54 PF00448.22 CTQ31156.1 - 0.0074 15.9 0.0 0.015 14.9 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_28 PF13521.6 CTQ31156.1 - 0.012 15.9 0.2 0.024 14.9 0.2 1.5 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 CTQ31156.1 - 0.025 13.7 0.1 0.045 12.8 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_25 PF13481.6 CTQ31156.1 - 0.05 13.2 0.1 0.26 10.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 CTQ31156.1 - 0.056 13.1 0.0 0.15 11.7 0.0 1.5 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_6 PF12774.7 CTQ31156.1 - 0.12 11.3 0.1 0.19 10.6 0.1 1.2 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region AAA_18 PF13238.6 CTQ31156.1 - 0.14 12.7 0.0 0.41 11.2 0.0 1.8 1 0 0 1 1 1 0 AAA domain AP_endonuc_2 PF01261.24 CTQ31157.1 - 5.7e-12 45.5 0.0 1.1e-11 44.6 0.0 1.4 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel Aldedh PF00171.22 CTQ31159.1 - 1.1e-136 456.0 0.0 1.3e-136 455.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 CTQ31159.1 - 0.0094 15.0 0.0 0.018 14.1 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) KduI PF04962.12 CTQ31160.1 - 1.3e-110 368.9 0.0 1.5e-110 368.6 0.0 1.0 1 0 0 1 1 1 1 KduI/IolB family SIS PF01380.22 CTQ31161.1 - 1.2e-24 86.6 0.0 2.1e-24 85.9 0.0 1.3 1 0 0 1 1 1 1 SIS domain HTH_6 PF01418.17 CTQ31161.1 - 6.5e-13 48.5 0.6 1.5e-12 47.3 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family DUF2090 PF09863.9 CTQ31162.1 - 7.4e-142 471.9 0.1 9.7e-142 471.5 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2090) PfkB PF00294.24 CTQ31162.1 - 4.4e-46 157.5 0.0 8.7e-46 156.6 0.0 1.5 1 1 0 1 1 1 1 pfkB family carbohydrate kinase TPP_enzyme_C PF02775.21 CTQ31163.1 - 7.7e-39 132.9 0.0 2.5e-38 131.3 0.0 1.9 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.18 CTQ31163.1 - 4.3e-36 124.1 0.1 6.1e-34 117.1 0.1 2.9 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 CTQ31163.1 - 4.6e-33 113.9 0.0 1.5e-32 112.2 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain R2K_3 PF14243.6 CTQ31163.1 - 0.01 15.9 0.1 0.026 14.5 0.1 1.6 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 FAD_binding_4 PF01565.23 CTQ31163.1 - 0.18 11.6 1.5 0.38 10.5 0.0 2.5 3 0 0 3 3 3 0 FAD binding domain GFO_IDH_MocA PF01408.22 CTQ31164.1 - 5.1e-26 91.9 0.2 7.6e-26 91.3 0.2 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 CTQ31164.1 - 2.7e-09 37.1 0.0 4.6e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain 2-Hacid_dh_C PF02826.19 CTQ31164.1 - 0.023 14.1 0.0 0.035 13.4 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AP_endonuc_2 PF01261.24 CTQ31165.1 - 8.3e-36 123.4 0.0 1e-35 123.1 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2 PF01261.24 CTQ31166.1 - 5.9e-27 94.5 0.0 1e-26 93.7 0.0 1.4 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 CTQ31166.1 - 0.00072 19.2 0.0 0.03 14.0 0.0 2.4 2 0 0 2 2 2 1 AP endonuclease family 2 C terminus SBP_bac_8 PF13416.6 CTQ31167.1 - 6.8e-40 137.6 8.4 6.8e-40 137.6 8.4 1.6 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 CTQ31167.1 - 6.3e-28 98.6 7.2 6.3e-28 98.6 7.2 1.4 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 CTQ31167.1 - 2.1e-05 24.0 0.4 0.21 11.0 0.1 2.5 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 CTQ31167.1 - 0.00055 19.7 1.1 0.0015 18.3 0.1 2.2 2 1 0 2 2 2 1 Bacterial extracellular solute-binding protein ABC_tran PF00005.27 CTQ31168.1 - 1.2e-34 119.8 0.0 2.2e-34 118.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 CTQ31168.1 - 9.8e-11 41.7 0.1 2.3e-10 40.5 0.1 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 CTQ31168.1 - 4.4e-09 36.6 0.0 0.0003 20.7 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system OB_MalK PF17912.1 CTQ31168.1 - 1.6e-08 35.3 0.0 4.3e-08 33.9 0.0 1.8 1 0 0 1 1 1 1 MalK OB fold domain SMC_N PF02463.19 CTQ31168.1 - 3.1e-06 26.8 0.3 5.4e-05 22.7 0.3 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain CysA_C_terminal PF17850.1 CTQ31168.1 - 2.2e-05 24.9 0.1 0.00037 21.0 0.0 2.7 3 0 0 3 3 2 1 CysA C-terminal regulatory domain AAA_22 PF13401.6 CTQ31168.1 - 4.7e-05 23.7 0.0 0.0001 22.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CTQ31168.1 - 5.3e-05 23.7 0.1 9.7e-05 22.8 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 CTQ31168.1 - 5.4e-05 23.2 0.0 8.3e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 CTQ31168.1 - 5.6e-05 23.1 0.0 0.0001 22.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 CTQ31168.1 - 0.0027 17.4 0.0 0.0055 16.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 CTQ31168.1 - 0.0036 17.5 0.2 0.013 15.7 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 CTQ31168.1 - 0.004 16.7 0.1 0.012 15.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 CTQ31168.1 - 0.0041 17.4 0.0 0.0086 16.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 CTQ31168.1 - 0.0066 16.5 0.1 0.019 14.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 CTQ31168.1 - 0.0074 16.8 0.0 0.035 14.6 0.0 2.2 3 0 0 3 3 2 1 AAA domain AAA_15 PF13175.6 CTQ31168.1 - 0.0081 15.9 0.0 0.081 12.6 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain Mg_chelatase PF01078.21 CTQ31168.1 - 0.016 14.6 0.0 0.032 13.6 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Septin PF00735.18 CTQ31168.1 - 0.02 14.2 0.0 0.035 13.4 0.0 1.3 1 0 0 1 1 1 0 Septin MMR_HSR1 PF01926.23 CTQ31168.1 - 0.04 14.0 0.0 0.085 12.9 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 CTQ31168.1 - 0.051 14.1 0.0 0.082 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CTQ31168.1 - 0.055 13.4 0.1 0.13 12.1 0.1 1.6 1 0 0 1 1 1 0 NACHT domain AAA PF00004.29 CTQ31168.1 - 0.058 13.8 0.0 0.15 12.5 0.0 1.7 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) ABC_ATPase PF09818.9 CTQ31168.1 - 0.072 11.9 1.4 1.1 8.0 0.3 2.3 2 1 0 2 2 2 0 Predicted ATPase of the ABC class SbcCD_C PF13558.6 CTQ31168.1 - 0.08 13.2 0.1 1.6 9.0 0.1 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit RNA_helicase PF00910.22 CTQ31168.1 - 0.086 13.2 0.0 0.2 12.1 0.0 1.6 2 0 0 2 2 1 0 RNA helicase AAA_14 PF13173.6 CTQ31168.1 - 0.1 12.7 0.0 0.22 11.5 0.0 1.6 2 0 0 2 2 1 0 AAA domain PhoH PF02562.16 CTQ31168.1 - 0.11 12.0 0.0 1.3 8.5 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_30 PF13604.6 CTQ31168.1 - 0.12 12.1 0.0 0.25 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 CTQ31168.1 - 0.12 11.1 0.0 0.18 10.6 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein ATPase_2 PF01637.18 CTQ31168.1 - 0.16 11.9 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Metallophos PF00149.28 CTQ31169.1 - 2.5e-18 67.4 0.2 3.6e-18 66.8 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 CTQ31169.1 - 6.1e-13 49.3 0.0 1.5e-12 48.0 0.0 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain BPD_transp_1 PF00528.22 CTQ31170.1 - 6.1e-19 68.5 11.8 6.1e-19 68.5 11.8 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Tom5 PF10642.9 CTQ31170.1 - 0.072 13.1 0.2 0.072 13.1 0.2 1.9 2 0 0 2 2 2 0 Mitochondrial import receptor subunit or translocase YqfD PF06898.11 CTQ31170.1 - 3 6.6 5.2 0.39 9.5 0.7 1.6 2 0 0 2 2 2 0 Putative stage IV sporulation protein YqfD BPD_transp_1 PF00528.22 CTQ31171.1 - 5.5e-21 75.1 13.9 5.5e-21 75.1 13.9 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DHHC PF01529.20 CTQ31171.1 - 3.4 7.8 10.0 0.59 10.2 0.7 2.6 1 1 1 2 2 2 0 DHHC palmitoyltransferase ADH_N PF08240.12 CTQ31172.1 - 4.3e-25 87.7 0.4 7.1e-25 87.0 0.4 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 CTQ31172.1 - 1e-22 80.5 0.0 1.7e-22 79.8 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 CTQ31172.1 - 2.5e-09 38.3 0.0 3.9e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 CTQ31172.1 - 3.8e-09 36.2 0.0 6e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 CTQ31172.1 - 1.3e-05 24.7 0.0 2.1e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 CTQ31172.1 - 0.004 17.3 0.0 0.01 16.0 0.0 1.6 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase ThiF PF00899.21 CTQ31172.1 - 0.0041 16.5 1.2 0.036 13.4 0.8 2.2 2 1 0 2 2 2 1 ThiF family Oxidored_nitro PF00148.19 CTQ31172.1 - 0.012 14.3 0.0 0.018 13.8 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase ETF PF01012.21 CTQ31172.1 - 0.018 14.9 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Electron transfer flavoprotein domain Sacchrp_dh_NADP PF03435.18 CTQ31172.1 - 0.025 14.9 0.2 0.044 14.0 0.2 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 CTQ31172.1 - 0.043 14.4 0.5 0.55 10.8 0.6 2.2 1 1 1 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 CTQ31172.1 - 0.088 12.9 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.18 CTQ31172.1 - 0.14 12.4 0.1 0.24 11.7 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_10 PF13460.6 CTQ31172.1 - 0.15 12.0 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding Sulfate_transp PF00916.20 CTQ31173.1 - 3.9e-53 180.6 23.2 5.5e-53 180.1 23.2 1.2 1 0 0 1 1 1 1 Sulfate permease family MFS_MOT1 PF16983.5 CTQ31173.1 - 1.3e-06 28.8 3.4 1.3e-06 28.8 3.4 4.5 3 1 0 3 3 3 1 Molybdate transporter of MFS superfamily Pro_CA PF00484.19 CTQ31174.1 - 4.6e-43 147.2 0.0 5.8e-43 146.9 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase Arm-DNA-bind_3 PF13356.6 CTQ31176.1 - 1.5e-19 70.1 0.1 3e-19 69.2 0.1 1.5 1 0 0 1 1 1 1 Arm DNA-binding domain Phage_integrase PF00589.22 CTQ31176.1 - 3.5e-19 69.3 0.0 6.4e-19 68.4 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family DUF3435 PF11917.8 CTQ31176.1 - 0.048 12.6 0.0 0.083 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) PLDc_2 PF13091.6 CTQ31178.1 - 3.7e-06 26.9 0.1 8.3e-06 25.7 0.1 1.7 1 0 0 1 1 1 1 PLD-like domain DUF3116 PF11313.8 CTQ31178.1 - 0.046 13.6 0.3 0.26 11.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3116) N6_Mtase PF02384.16 CTQ31179.1 - 4.7e-15 55.6 0.2 7.6e-15 55.0 0.2 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase Eco57I PF07669.11 CTQ31179.1 - 2.4e-05 24.8 0.0 0.00012 22.6 0.0 2.2 1 0 0 1 1 1 1 Eco57I restriction-modification methylase Methyltransf_31 PF13847.6 CTQ31179.1 - 6.5e-05 22.8 0.0 0.00014 21.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CTQ31179.1 - 0.0021 17.7 0.0 0.053 13.1 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase small domain Methylase_S PF01420.19 CTQ31179.1 - 0.0028 17.9 0.1 0.0091 16.2 0.1 1.9 1 0 0 1 1 1 1 Type I restriction modification DNA specificity domain Methyltransf_23 PF13489.6 CTQ31179.1 - 0.044 13.6 0.0 0.11 12.3 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain N6-adenineMlase PF10237.9 CTQ31179.1 - 0.59 9.9 4.2 0.87 9.4 0.7 2.5 2 1 0 2 2 2 0 Probable N6-adenine methyltransferase TraD PF06412.11 CTQ31181.1 - 1.3e-12 47.3 0.4 1.9e-12 46.8 0.4 1.3 1 0 0 1 1 1 1 Conjugal transfer protein TraD DUF1690 PF07956.11 CTQ31181.1 - 0.011 16.2 0.6 0.013 15.9 0.6 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) IFT20 PF14931.6 CTQ31181.1 - 0.042 14.0 1.2 0.072 13.3 1.2 1.3 1 0 0 1 1 1 0 Intraflagellar transport complex B, subunit 20 MobA_MobL PF03389.15 CTQ31183.1 - 3.2e-54 184.0 7.5 4.3e-54 183.6 1.4 3.0 1 1 1 2 2 2 1 MobA/MobL family LptF_LptG PF03739.14 CTQ31186.1 - 0.023 13.5 0.1 0.04 12.8 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG NinF PF05810.12 CTQ31188.1 - 0.026 14.4 0.1 0.033 14.1 0.1 1.2 1 0 0 1 1 1 0 NinF protein TF_Zn_Ribbon PF08271.12 CTQ31188.1 - 0.057 12.9 0.8 0.097 12.2 0.8 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding zf-LITAF-like PF10601.9 CTQ31188.1 - 0.08 13.2 1.0 0.08 13.2 1.0 1.7 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain LPAM_1 PF08139.12 CTQ31189.1 - 0.00013 22.2 3.2 0.00022 21.5 3.2 1.3 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site LPAM_2 PF13627.6 CTQ31189.1 - 0.0019 18.0 0.8 0.0033 17.2 0.8 1.4 1 0 0 1 1 1 1 Prokaryotic lipoprotein-attachment site tRNA_anti-like PF12869.7 CTQ31190.1 - 0.00082 19.0 0.4 0.0035 17.0 0.4 1.9 1 1 0 1 1 1 1 tRNA_anti-like Antimicrobial24 PF16049.5 CTQ31190.1 - 0.11 12.4 0.5 0.23 11.5 0.5 1.5 1 0 0 1 1 1 0 Frog antimicrobial peptide LPAM_1 PF08139.12 CTQ31190.1 - 0.12 13.0 1.9 0.47 11.0 1.9 2.1 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site HTH_3 PF01381.22 CTQ31191.1 - 9.3e-12 44.8 0.0 1.5e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 CTQ31191.1 - 8.9e-09 35.3 0.0 1.6e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 CTQ31191.1 - 1e-07 32.2 0.0 1.4e-07 31.7 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain Pou PF00157.17 CTQ31191.1 - 0.0089 16.0 0.0 0.025 14.5 0.0 1.7 1 1 1 2 2 2 1 Pou domain - N-terminal to homeobox domain YycC PF14174.6 CTQ31191.1 - 0.15 11.9 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 YycC-like protein CbtA PF09490.10 CTQ31192.1 - 0.062 13.1 1.0 0.09 12.5 0.1 1.6 2 0 0 2 2 2 0 Probable cobalt transporter subunit (CbtA) E1-E2_ATPase PF00122.20 CTQ31192.1 - 0.26 10.8 3.8 0.11 12.0 0.7 1.8 2 0 0 2 2 2 0 E1-E2 ATPase DUF2975 PF11188.8 CTQ31192.1 - 1.4 8.8 9.1 0.76 9.7 3.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2975) HTH_36 PF13730.6 CTQ31195.1 - 0.012 15.6 0.2 0.023 14.6 0.2 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 CTQ31195.1 - 0.074 12.6 0.1 0.16 11.6 0.1 1.6 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 CTQ31195.1 - 0.084 12.8 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 MarR family MarR_2 PF12802.7 CTQ31195.1 - 0.14 12.1 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF4515 PF14988.6 CTQ31196.1 - 0.00044 20.1 2.1 0.00053 19.9 2.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4515) Histone_HNS PF00816.21 CTQ31196.1 - 0.43 11.4 3.0 2.4 9.1 3.0 1.9 1 1 0 1 1 1 0 H-NS histone family HTH_Tnp_1 PF01527.20 CTQ31200.1 - 9e-23 80.4 0.1 1.3e-22 79.9 0.1 1.2 1 0 0 1 1 1 1 Transposase HTH_23 PF13384.6 CTQ31200.1 - 1.3e-05 24.9 0.0 2.1e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 CTQ31200.1 - 9.5e-05 21.7 0.4 0.0033 16.8 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 LZ_Tnp_IS481 PF13011.6 CTQ31200.1 - 0.00017 22.1 0.0 0.00019 21.9 0.0 1.2 1 0 0 1 1 1 1 leucine-zipper of insertion element IS481 HTH_28 PF13518.6 CTQ31200.1 - 0.00029 20.9 0.0 0.0005 20.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 CTQ31200.1 - 0.00062 19.9 0.3 0.0012 19.0 0.3 1.6 1 1 0 1 1 1 1 Helix-turn-helix of insertion element transposase HTH_29 PF13551.6 CTQ31200.1 - 0.01 15.8 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Terminase_5 PF06056.12 CTQ31200.1 - 0.027 14.3 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_7 PF02796.15 CTQ31200.1 - 0.064 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF1657 PF07870.11 CTQ31200.1 - 0.094 12.6 0.5 3.9 7.4 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1657) rve_3 PF13683.6 CTQ31201.1 - 1.3e-27 95.3 0.2 1.3e-27 95.3 0.2 1.8 2 0 0 2 2 2 1 Integrase core domain rve PF00665.26 CTQ31201.1 - 4.6e-26 91.3 0.0 1.2e-25 90.0 0.0 1.7 2 0 0 2 2 2 1 Integrase core domain HTH_21 PF13276.6 CTQ31201.1 - 9.1e-09 35.3 1.1 1.9e-08 34.3 1.1 1.5 1 0 0 1 1 1 1 HTH-like domain rve_2 PF13333.6 CTQ31201.1 - 0.0019 18.3 0.6 0.0019 18.3 0.6 2.2 2 0 0 2 2 2 1 Integrase core domain Phe_hydrox_dim PF07976.12 CTQ31201.1 - 0.083 12.9 0.0 2.4 8.2 0.0 2.2 2 0 0 2 2 2 0 Phenol hydroxylase, C-terminal dimerisation domain HEPN_Apea PF18739.1 CTQ31202.1 - 7.8e-13 48.7 0.2 3.3e-12 46.7 0.0 2.2 2 1 0 2 2 2 1 Apea-like HEPN DUF3698 PF12479.8 CTQ31202.1 - 0.054 14.0 0.0 0.14 12.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3698) DUF4400 PF14348.6 CTQ31203.1 - 0.013 15.0 0.6 0.015 14.8 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) PuR_N PF09182.10 CTQ31204.1 - 0.17 11.8 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal TraG-D_C PF12696.7 CTQ31206.1 - 7.4e-13 48.6 0.0 1.2e-12 48.0 0.0 1.3 1 0 0 1 1 1 1 TraM recognition site of TraD and TraG TrwB_AAD_bind PF10412.9 CTQ31206.1 - 3.8e-06 26.1 0.0 5.9e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain T4SS-DNA_transf PF02534.14 CTQ31206.1 - 0.002 17.0 0.0 0.0028 16.5 0.0 1.1 1 0 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer Yip1 PF04893.17 CTQ31207.1 - 0.011 15.5 1.2 0.014 15.1 1.2 1.1 1 0 0 1 1 1 0 Yip1 domain PAAR_motif PF05488.13 CTQ31208.1 - 2.8e-07 30.6 3.8 8.6e-07 29.0 3.3 2.2 1 1 0 1 1 1 1 PAAR motif DUF962 PF06127.11 CTQ31209.1 - 0.0025 17.9 0.3 0.0029 17.6 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF962) DUF1538 PF07556.11 CTQ31209.1 - 0.0074 15.6 0.9 0.0089 15.3 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1538) HTH_Tnp_1 PF01527.20 CTQ31211.1 - 2e-20 72.9 0.2 2.5e-20 72.5 0.2 1.2 1 0 0 1 1 1 1 Transposase HTH_23 PF13384.6 CTQ31211.1 - 5.9e-07 29.1 0.0 1.1e-06 28.2 0.0 1.6 1 1 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 CTQ31211.1 - 2.7e-06 27.4 0.0 4.6e-06 26.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 CTQ31211.1 - 8.1e-06 25.8 0.1 1.5e-05 24.9 0.0 1.6 1 1 0 1 1 1 1 Winged helix-turn helix HTH_Tnp_1_2 PF13022.6 CTQ31211.1 - 0.001 19.2 0.2 0.0017 18.5 0.1 1.6 1 1 1 2 2 2 1 Helix-turn-helix of insertion element transposase Terminase_5 PF06056.12 CTQ31211.1 - 0.0077 16.1 0.0 0.016 15.1 0.0 1.6 2 0 0 2 2 2 1 Putative ATPase subunit of terminase (gpP-like) DUF1492 PF07374.11 CTQ31211.1 - 0.018 15.2 0.0 0.035 14.3 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) HTH_Tnp_IS630 PF01710.16 CTQ31211.1 - 0.018 15.1 0.2 0.019 15.0 0.2 1.2 1 0 0 1 1 1 0 Transposase Phage_AlpA PF05930.12 CTQ31211.1 - 0.026 14.3 0.0 0.14 12.0 0.0 2.0 2 0 0 2 2 2 0 Prophage CP4-57 regulatory protein (AlpA) HTH_18 PF12833.7 CTQ31211.1 - 0.046 14.0 0.0 0.07 13.4 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_26 PF13443.6 CTQ31211.1 - 0.058 13.8 0.0 0.35 11.3 0.0 2.0 1 1 1 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_22 PF13309.6 CTQ31211.1 - 0.068 13.3 0.0 0.18 11.9 0.0 1.8 1 1 0 1 1 1 0 HTH domain DivIC PF04977.15 CTQ31211.1 - 0.082 12.7 1.9 0.13 12.1 1.9 1.3 1 0 0 1 1 1 0 Septum formation initiator HTH_17 PF12728.7 CTQ31211.1 - 0.089 13.0 0.0 0.23 11.7 0.0 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain rve PF00665.26 CTQ31212.1 - 0.00014 22.1 0.0 0.00017 21.8 0.0 1.1 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 CTQ31213.1 - 8.7e-29 99.1 0.1 1.2e-28 98.6 0.1 1.2 1 0 0 1 1 1 1 Integrase core domain rve PF00665.26 CTQ31213.1 - 4e-14 52.8 0.0 6.9e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 CTQ31213.1 - 3.7e-07 30.2 0.0 5.6e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 CTQ31213.1 - 0.0022 18.2 0.0 0.0027 17.9 0.0 1.1 1 0 0 1 1 1 1 DDE domain Glycos_transf_2 PF00535.26 CTQ31214.1 - 9.3e-26 90.6 0.0 1.8e-25 89.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 CTQ31214.1 - 2.1e-19 70.1 1.3 3.2e-09 36.7 0.1 2.5 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 CTQ31214.1 - 7e-13 49.0 0.0 1.8e-12 47.6 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_1 PF00534.20 CTQ31214.1 - 4.2e-12 45.9 0.1 2.3e-09 37.0 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 CTQ31214.1 - 1.1e-08 35.5 0.0 4.1e-08 33.7 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 CTQ31214.1 - 1.5e-07 31.6 0.0 3.3e-07 30.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_transf_7C PF02709.14 CTQ31214.1 - 1.6e-05 24.5 0.1 3.7e-05 23.3 0.1 1.6 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Glyco_transf_5 PF08323.11 CTQ31214.1 - 5.3e-05 23.0 0.1 0.0013 18.5 0.0 2.5 1 1 1 2 2 2 1 Starch synthase catalytic domain Glyco_trans_2_3 PF13632.6 CTQ31214.1 - 0.00031 20.7 0.0 0.002 18.1 0.0 2.1 2 1 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_trans_4_4 PF13579.6 CTQ31214.1 - 0.0015 19.0 0.0 0.0082 16.6 0.0 2.2 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_21 PF13506.6 CTQ31214.1 - 0.0017 17.8 0.0 0.0043 16.6 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 21 THAP PF05485.12 CTQ31214.1 - 0.15 13.0 0.0 0.32 11.9 0.0 1.5 1 0 0 1 1 1 0 THAP domain PS_pyruv_trans PF04230.13 CTQ31215.1 - 5.4e-14 52.8 0.8 1.4e-13 51.5 0.8 1.6 1 1 0 1 1 1 1 Polysaccharide pyruvyl transferase Transposase_mut PF00872.18 CTQ31217.1 - 7.2e-30 104.1 0.0 8.3e-30 103.9 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family Nas2_N PF18265.1 CTQ31217.1 - 0.18 11.8 0.1 0.41 10.6 0.0 1.6 2 0 0 2 2 2 0 Nas2 N_terminal domain Transposase_mut PF00872.18 CTQ31218.1 - 0.002 17.1 0.0 0.0022 16.9 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family HTH_23 PF13384.6 CTQ31218.1 - 0.017 14.9 0.0 0.027 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Sigma70_r4_2 PF08281.12 CTQ31218.1 - 0.021 14.5 0.1 0.027 14.1 0.1 1.3 1 1 0 1 1 1 0 Sigma-70, region 4 DUF433 PF04255.14 CTQ31218.1 - 0.085 12.7 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF433) HNH PF01844.23 CTQ31219.1 - 2.8e-08 33.8 0.6 4.4e-08 33.2 0.6 1.3 1 0 0 1 1 1 1 HNH endonuclease Prok-RING_1 PF14446.6 CTQ31219.1 - 0.12 12.4 1.4 1.3 9.0 0.1 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Glyco_hydro_43 PF04616.14 CTQ31220.1 - 8.2e-93 310.8 3.2 1.2e-92 310.3 3.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 GH43_C2 PF17851.1 CTQ31220.1 - 1.9e-51 174.7 1.0 2.9e-51 174.1 1.0 1.3 1 0 0 1 1 1 1 Beta xylosidase C-terminal Concanavalin A-like domain DUF1349 PF07081.11 CTQ31220.1 - 0.0011 18.7 0.3 0.0022 17.7 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1349) MFS_2 PF13347.6 CTQ31221.1 - 1.4e-83 280.9 33.0 1.6e-83 280.7 33.0 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein CYYR1 PF10873.8 CTQ31221.1 - 3.1 8.2 5.1 16 5.9 1.5 2.8 2 1 0 2 2 2 0 Cysteine and tyrosine-rich protein 1 AP_endonuc_2 PF01261.24 CTQ31222.1 - 0.00014 21.4 0.1 0.00084 18.8 0.1 2.1 2 1 1 3 3 3 1 Xylose isomerase-like TIM barrel AdoHcyase PF05221.17 CTQ31222.1 - 0.051 12.7 0.0 0.082 12.0 0.0 1.2 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Klebsiella_pneumoniae-CH1034/GCA_001404095.1_CH1034_protein.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Klebsiella_pneumoniae-CH1034/GCA_001404095.1_CH1034_protein.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Klebsiella_pneumoniae-CH1034/GCA_001404095.1_CH1034_protein.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Klebsiella_pneumoniae-CH1034/GCA_001404095.1_CH1034_protein.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Sun Mar 24 03:02:12 2019 # [ok]