>AHV91033.1 delta-1-pyrroline-5-carboxylate dehydrogenase [Bordetella holmesii ATCC 51541]
MASTTLGVKVDDALRDRLKAAAQKLQCTPHWLHKQALVAYLEKIERGHLPPEMAHLAREDESSEEAFDAGPTPPFYEFGQ
DVQPQSVLRAAITSAYRRPEPECVPLLLGQARMPHLEKIHTMAARLVQTLRDKRTGGGVEGLIQEFSLSSQEGVALMCLA
EALLRIPDRATRDALIRDKVARGDWKSHMGGAQSLFVNAATWGLMITGKLVAVSSEQSLSKALTRLIGKGGEPLVRKGVN
MAMRMMGEQFVSGQTISEALANNRKLEARGVRYSYDMLGEAATTAEDADRYNAAYEQAIHAIGKAAAGRGIYEGPGISIK
LSALHPRYARAQRERVIRELLPRIRHLAILARQYDIGLNIDAEEADRLEISLDLLESLCFTPELEGWSGIGFVIQAYQKR
APFVIDYVVDLARRSGHRLMIRLVKGAYWDSEIKRAQVDGLEGYPVYTRKVYTDVAYLACARKLLAAPEAVYPQFATHNA
YTVAAIYHLAGQNYYPGQYEFQCLHGMGEPLYDEVVGAAGQGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNL
IGDDSISVEQLVADPVQAAARIVPLGAAHEKIPLPRDLYGSARANSAGLDLSNEHRLGSLSAALQAGAATPWRAMPMLGD
AESAWDEARAMDVLNPADQRDVVGRVMEADAQAVDAALRAAGNAAPIWQSTPVQARAQCLRRAARLLEEQMQTLLGLIVR
EAGKTLSNAIAEVREAVDFLRYYADQVEREFDNDTHRPLGPVLCISPWNFPLAIFTGQVAAALAAGNTVLAKPAEQTPLI
AAQAVGILRAAGIPPGAVQLLPGKGETIGAALVAHPGVRGIMFTGSTEVARLIARQLADRLDDRGHTIPLIAETGGQNAM
VVDSSALAEQVVADVLISAFDSAGQRCSALRVLCVQEDSADHVLTMLRGAMRELRMGNPDRLSTDVGPVIDSEARQNILR
HIDEMRAAGHDVVQIEGTPECRFGNFVPPTLIEIKDIAELKREVFGPVLHVLRYARGDLDSVLNSINATGYGLTFGVHTR
IDETVVRVAESVQAGNIYVNRNIVGAVVGVQPFGGENLSGTGPKAGGPLYLYRLLSLRPGGLPPSLAGAGRMPLDVTLPG
PTGETNTYRVEPRGAVYCVAATIAGARAQWEAARLTGNLAWFADTPAARDWLDSMDPATVQEQVAILDDSEVDLADFQAV
LFEGDGDTLRHLNQRIAAREGPILAVHGLSPDEVAAGVAYAPERLLNERAISVNTAAAGGNASLMTIG
>AHV91034.1 succinate semialdehyde dehydrogenase [NAD(P)+] Sad [Bordetella holmesii ATCC 51541]
MLAIMPWNFPYWQILRGAMPIVLAGNSYVLKHAPNVQGCARALLDLFAQAEFPEGVFSVINVTNDLVSTAIADRRISAVA
VTGSVRAGSAIAAQAGAALKKTLLELGGSDPFVVLADADIDRAVDAAVVGRYQNSGQICIAAKRIILEAPIAAAFTEKFV
AKVAKLEFGDPQKPSTYVGPMARTDLRDELANQVHRTLEQGAELLLGGRIPKGVGAFHEPTVLANVKPGMAAFTEETFGP
VAALIQAKDEDDALQLANASEFGLSGAIWTQRKDLARKMARGLETGGVFVNGFSASDPRVPIGGVKNSGYGRELSHFGVH
EFVNVQTVWFDRT
>AHV91035.1 putative bacterioferritin-associated ferredoxin [Bordetella holmesii ATCC 51541]
MDAGANSLGDLQFELGVASCCGCCAATASEYLPGGRASSVCDVRSIAVPANPPAAMLEADRPAANTFPIPLVAAA
>AHV91036.1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MKNAAAGDQIFTLTELQQRPVAVIGLGQIGMSWAVYFAAQGFAVRATDPAADAVERTRAYVHKVWPVLADVGLVVADASP
GRISFHATVAETVTGCGWIQENAPEIESLKIDLLAQIDAAADAQAIIASSTSALAMSVMQSKCVHPQRCLMAHPFNPPHL
VPLVELVGGKATAARTLDIAFDFYRAIGREPIRLRREIYGHVANRLQYVLFNEAARLVLDGVATVEDVDRAITCGPGMRW
PFVGPFMTFHMAGGEAGMAGAFAKFAARDALSTDRSKRISLGADERQQLHEGACEAQQGVSMQALETRRDRLLVELLKVK
AEIAARAG
>AHV91037.1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Bordetella holmesii ATCC 51541]
MPVLLDPARAPRLDALLSRVSTQGLDPKLDTGDAELPLIAGIGTLASASAQEISFLSNPRYQSQLANSGAAAVIVTPEVA
QAQREQGCSQLYVVCQHPYLLYARLAQWFDAERRGLPVAGVHPTAVVADDVVIEDGASVGPQCVIESGVHIGRGAVIGPA
CVIGKDCRIGADSRLSARVTLYERVTIGARAIIHSGAVLGADGFGFAPDPTLGKGAWGKIPQLGGVTIGDDVEIGANTTI
DRGALEDTVIGNGAKLDNLIMIAHNVRVGAHTAIAACTGVAGSTTIGERCIVGGAAMFSGHLTICDDVTISGGTPVTSSI
SKPGRYTGVYPYAEHGEWQRNAAVIQQLAQLRRRVRTLEKA
>AHV91038.1 shikimate / quinate 5-dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MLNINSTATRKALAFPSVIATLRAAFRGGYTVPARHVHHIKAEGRQGTSLIMPAWSEAGYYGVKVINIFAENTRDGLPGL
HASYALYCARTGVPLAQIDGNVVTAFRTAAAAALGADYLARRDAQRLLVLGSGRIAGLVPAAMRAVRPIEEVMVWNVRQQ
GAQALARRLCDEGFRAWAVTDLQTAVSRADIVSCATLSTTPLVRGEWLRGGTHLDLIGSFTPEMMEADPACFAGTSVYVD
TDEAPTKSGDLLEAFKAGTLRMPDIRGTLFDLVRGQVSGRSEDGQITVFKAVGSALEDLALAALVYEAYAAEPELVMSQA
RTAET
>AHV91039.1 50S ribosomal protein L4 [Bordetella holmesii ATCC 51541]
MDLKLLNDQGQAATFSAPDTVFGRDFNEALVHQIVVAFQANARSGNRAQKDRAEVKHSTKKPWRQKGTGRARAGMTSSPL
WRGGGRTFPNSPEENFSQKVNKKMYRAGIRAILSQLAREDRITVVDTFSLDSPKTKLAAEKLKTLGLDSVLIITDTVDEN
VYLATRNLPHVAVVEPRYADPLSLIHYKKVLITKPAIAQFEEMLG
>AHV91040.1 iron donor protein CyaY [Bordetella holmesii ATCC 51541]
MTETEFLALTEQVLDRLESQADDWMSMHDVDIEANRSGNVLTLIFEDDIHVVINSQAAMQELWVAARSGGFHYRFDGQQW
NDTRGGPHLADALSQICTAAAGVPLSVRV
>AHV91041.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MHQINRLGVARTFQHVMVFPDLTLVENVMIGRQARTKAGVFASVLRTPGERRERAASRARAIELLDDVGLADKADELAGS
LPYGEQRQLDIARALATDPQIILLDEPAGGLNLQERLALKALVRKLHGKGYTVVLIEHDIRLVMELCSHIVVLNYGTKIV
DDTPDAVQQDKQVIAAYLGEGAKK
>AHV91042.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bordetella holmesii ATCC 51541]
MTAADAEVLLAQPRGFCAGVDRAIEIVERALELHGAPIYVRHEIVHNRYVVEDLRAKGAIFIYELDQAPEGAIVVFSAHG
VSKAVRAEAEERGLRVFDATCPLVTKVHIEVARMRAAGREIIMIGHKGHPEVEGTLGQAQGGMYLVETVEDVDALQVTDP
DNLAYVTQTTLSVDDATAVSRALKSRFPTIVEPKKSDICYATQNRQDAVKVLAPECDLVLVVGSPNSSNSNRLREVAERI
GVQAHLVDGAGAIDPAWLIGRHRVGITAGASAPEVLVRQVIDRVRELGAVSVRTMPGLEENVAFPLPKGLSRKIAQVENL
D
>AHV91043.1 conserved hypothetical integral membrane family protein [Bordetella holmesii ATCC 51541]
MRRFETMRGYQFLLAVFCMGAVVVGSNILVQVPLNNWLTWGGLSYPVAFLVTDVLNRRFGPVAARRVAWFGFAAALAVSV
WVASPRIALASGLAYICAQLIDIQVFDRLRDQRWWRAPLVSGVIGAVADTAIFFSVAFAATGTPWLTWMLGDLAIKLVIN
ISMLAPFRALMWNLARPVPQTR
>AHV91044.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MIKVSGQYVSPVEVENVLVQHEAVLEAAVIGVPDHDGLIKTKAYVVLRPGYAPDASTGAALQDYVKSHLAPFKYPRQINF
TEELPKTATGKIQRFRLRQMEEASL
>AHV91045.1 ribosomal protein L18 [Bordetella holmesii ATCC 51541]
MDKKVTRLRRAVPTRRKITQLGVHRLSVFRSNLHIYANIISPEGDRVVVSASTLEAEVRSQLAGQSGTGGNAAAAALIGK
RVAEKAKAAGIELVAFDRSGFRYHGRVKALADAAREAGLKF
>AHV91046.1 aconitate hydratase 2 [Bordetella holmesii ATCC 51541]
MLETYRQHVAERAALGIPPLPLSAQQTADLIELLKNPPAGEEHFLLDLLTHRVPAGVDDAAKVKASYLAAVALGKESCAL
ISRAKATELLGTMLGGYNIGPLIELLDDAEVGTVAAEGLKKTLLMFDAFHDVKEKADKGNANARGVLQSWADAEWFTSRP
EVPQSLTITVFKVPGETNTDDLSPAPDATTRPDIPMHALAMLKNKREGANFQPEEDGKRGPVKFIESLKDKGHLVAYVGD
VVGTGSSRKSATNSVLWFTGEDIPFVPNKRFGGVCLGSKIAPIFYNTMEDAGALPIELDVSKMEMGDVVELRPYDGKALK
NGEVIAEFQVKSDVLFDEVRAGGRIPLIIGRGLTAKAREALGLPPSTLFRLPMDPADSGRGFSLAQKMVGRACGLPEGQG
VRPGTYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVKTHHTLPQFISTRGGISLRPGDG
VIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVNAIPLYA
IKQGMLTVAKQGKKNIFSGRILEIEGLPDLKVEQAFELSDASAERSAAGCSVRLNKEPIIEYINSNIVMLKWMIANGYED
ERSIARRIKAMEAWLADPKLLEPDADAEYAAVIEIDLADIHEPIVACPNDPDDVKTLSDVAGAKIDEVFIGSCMTNIGHF
RAASKLLEGKRDIPVKLWVAPPTKMDAQQLTEEGHYGVFGTAGARTEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
KNTNVYLGSAELAAICSRLGRIPTKEEYLSDMGVINKSGDQIYKYLNFDQIADYKDVADSVAV
>AHV91047.1 hypothetical protein D560_3242 [Bordetella holmesii ATCC 51541]
METELDGRLLALRQALAISIALSTRGHPQATGMALELLDDLRSHADSTPADAPFDAPVWVQGAQDELEQISRLVRAFTQT
QD
>AHV91048.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQARGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91049.1 ferrochelatase [Bordetella holmesii ATCC 51541]
MFLRLFKYLWPERFLAEPVRGDDPFDDNPPAREPGRSGVLLVNLGTPDTPSAGDIRKYLGEFLSDPRVIEIPSYLWKPIL
YGLVLTMRPKKLAPRYADIWMEEGSPLLVYSRQQAEGVAKVLASRGLDVPVVLGMRYGNPSVADGIARLRDQGCDHILTV
PLYPQYAASTTATAVDAVTRHAARLRDQPAMRFVKRFYDDPVYLDAQAERIRAFWQAQGKPQKLLMSFHGLPRYSIELGD
PYYRDCLDTARLLRERLGLAADEVEVCFQSRFGSARWMEPYTEPTLKELARQGVSEVDVVCPGFVADCLETLEEINQECR
QAFMQAGGKRFRCIPALNDSPLWAEGLASLVQSQLQGWPVSRS
>AHV91050.1 hypothetical protein D560_3847 [Bordetella holmesii ATCC 51541]
MTQQFTAFDGMRRVAQGSLAEVALALHDRPKGQVLVFNDHTGRQIDLDPRLTATSATFAPLALADPAQEGAAFGRGRGRP
RLGWSPARSRSCRATGIGWRNNPAARR
>AHV91051.1 dTDP-4-dehydrorhamnose reductase [Bordetella holmesii ATCC 51541]
MKLLLLGKDGQLGRALRRALAPLGEVLAVGRDSGLDLADLDGLRRLVRAAGPDVVVNAAAFTDVDRVQAEPELALRINAE
APDLLARHMRASRGWLVHYSSEYVYDGSGQHWRDETSPAAPLNCYGQSKLAGDEAVRQSGVHHLLLRTSWVYGLHGANFP
RSVLQMAARQPQMRIVDDQIGAPTSADLIADVTAQALRQARLQPAVSGLYHLAAAGAVSRHAYAQYLVEQARRLGWSLGV
QTLHAISSADYPQPALRPLNSRLDCARLQAVFGLRLPDWREGVDRLLADWWACPWRRDA
>AHV91052.1 ydjC-like family protein [Bordetella holmesii ATCC 51541]
MAMKTSAQGRRVAVCGDDFGMDACIDHAIFQLLDAGILSAVSCMSGGASFARHVAQLKASDTDIGLHLNLSEPLSAADRD
MLPLCALLVRAYAGRLDPQRISQAIERQLDAFEDEMGQAPHYIDGHQHVHQLPGVRGPLLQALQRRYPGQRPWLRLTQPG
ALQGLPWAAVAKAHVIAGLGGHALAGQLCQQGWPANGRFFGAYGFTGGKRHYATLLHHWLANALDGDLIMCHPALPGPVE
HGQQRVAEFEVLASAELREWLVGNGLSVTRLSQMIPVNASQRSARRLAWDEADRPVISR
>AHV91053.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91054.1 4-hydroxyphenylpyruvate dioxygenase [Bordetella holmesii ATCC 51541]
MTTPFQPWDNPMGTAGFEFIEYTAPDPVALRKVFELLGFKAIAKHRHKDVTLYRQGGINFLINAEPDSFAQRFARLHGPS
ICAIGFRVDDAARAYKRALELGAWGFDSHSGPMELNIPAIKGIGDSLIYLVDRWRGKTGHGGIGDISIYDVDFVPLDPAN
AQDDLTYAGAGLTLVDHLTHNVHKGRMAEWAEFYERLFNFREVRYFDIEGKVTGVKSKAMTSPCGNIRIPINEEGTEEKG
QIQEYLDLYRGEGIQHIAMATNNIYETIEALRNNGVVFLDTPETYYELLDRRLPQHGENVERLQKNRILLDGAPGGGLLL
QIFTENQIGPIFFEIIQRKGNDGFGEGNFKALFESIELDQMRRGVVKSAD
>AHV91055.1 sulfatase family protein [Bordetella holmesii ATCC 51541]
MFCLWGEAHFDNMKAFFLGNGFTELYDLKTFNNPAFVGTWGASDEDMFNRVHDVLEQAGDEPCFILAFSVSNHSPWEYPA
GRITPVGEPATVGNTVRYADWAIGQFFDRARQSAYWDDTVFLVTADHDVRVGGKQRIPLRHFHIPALILGGPVHPRIDER
VVSQIDFPVTLLSLLGIEGEHPMIGADLTDPAAGGRAVMQYGDVYGLLQEQTLTILEPGKPGSQYLYQGGDDYLPIVPAD
AGALRKTLAHALWPQRVYRDQAYTLPHLRKKR
>AHV91056.1 hypothetical protein D560_1691 [Bordetella holmesii ATCC 51541]
MRYDGRDAARHSPLLQRWADEGRIVALCPEVAGGLPIPRAAAEIEPGGGGLAVWKGAARVLTRQGLDVSQAFVCGARQAL
ALIQRHDIVAAVLKEGSPSCGTAHIYDGRFQGRRVPGSGVTAACLAQAGVPVFSELGLEAADAVMRAHD
>AHV91057.1 hypothetical protein D560_2732 [Bordetella holmesii ATCC 51541]
MGLSGLPSPERAILMAAASASMAWSWPKTTVFKSRSSVASLLRSSLETDCGGMRAIFETMASISALPMTFFCRERGSSRC
AAPASSITSMALSGRCRSLM
>AHV91058.1 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein [Bordetella holmesii ATCC 51541]
MGQALALLLARASAHPERIVLLAGQPAPARSQPAADPRVLAMNHGSRVLLDSLGAWPSRFADIRHVHISQRGRLGRTIIG
HEDFGVEQLGSVVPYAALHDRLAERVSQSGVTVLSGSAATMTSQSLDSVHLAHGRQVISCRVAVQCDGTGGTDLKRDYGQ
HAVITSARASLPRPGWAWERFTAEGPLALLPHPQQAGSYSVVWCVAPERAQALATLDDAQFSAQLSAAFGERLGRLSSQA
ARHIFPLELKARHAQVHGRVATIGNAAQTLHPVAGQGLNLGLRDAAQLAQALSGWHAADDPRQRLGDFARIRSADRWLTA
GLTDLMPRVFATGLAPVEHACGLALLALDLAAPARAPLARHLLQGLRA
>AHV91059.1 NADH dehydrogenase (quinone), G subunit [Bordetella holmesii ATCC 51541]
MVELTVDGNKVEVPEGSMVMHAAQKIGLYVPHFCYHKKLSIAANCRMCLVEVEKAPKALPACATPVTNGMVVHTCSEKAK
AAQKSVMEFLLINHPLDCPICDQGGECQLQDLAVGYGGSSSRYHEEKRVVFHKDLGPLVSAEEMSRCIHCTRCVRFGQEI
GGMMELGMLNRGEHAEITSFVGRSIESELSGNMIDICPVGALTSKPFRYSARTWELARRRSVSPHDSVGANLVVQVKGDR
VLRVVPFENENVNECWISDRDRFSYEGLNVDDRLAAPMIRGTDGNWQEASWADALQAVAQGLSRVRESAGAGQIGALATE
YATTEEFSLLARLTRALGSENIDFRLRQTDAGFDAALSGAPWLGMPIAELDNLDRVLVVGSFLRKDHPLMAQRLRQAVKR
GTQVLLLDSACDDPLLPVAARLTVAPSELARGLAEVAVALAQVKELPVPAEFAMVTPGEDAKRIAASLASGSNAAVLMGN
LVVSAPNASTLAANARVIAELTGAKFGFLTAGGNTVGGYLAGAVPGRGGKTAAQMLAEPLKAYVVLHAEPTLDADNGPQA
LAALRGAQFAVALTSYRSSAEAWADVMLPVAPFTETSGTFVNAAGVAQSFKGTVAPHGQSRPAWKVLRVLGNVLHLTGFD
DETSEAVRDAALAGGIEGRLSNEINAALGVGQPAGALERLADVPIYRSDAIVRRSQPLQAHAASRAPKARMNARTLAALG
LDAGAKVRVSSSQGSVELEAALDQAVADNAVRVSAAFAQTAALGGAFGQISVERA
>AHV91060.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MSYTTPLRDIRFAMKELAGLDEILKLPGFEEAEPDLVDAILDENARFVQEVVAPLNVIGDRQPPVWKDGAVTATPGFAKA
FAEYSTGGWQGLQHPVQWGGQGLPQLVAAPAGENIQAASLAFALCPMLTDGVIEALLTVGSEEQRRAYIPNLIGGRWTGT
MNLTEPQAGSDLALVSTRAVPQDDGSYRVSGQKIFITFGEHDLAENIIHLVLARLPDAPAGVKGISLFIVPKFLVNEDGS
LGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANRGLEYMFIMMNASRYSVGQQGIALAERAYQHA
QEYARERVQGRAIEGSAGPVTISHHPDVQRMLLTMRSLTEAARAVSYVAAAAHDKANHHPDAEVRARNRAFYEYLVPIVK
GFSTESAVEVASLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLVGRKTLRDGGAAAHASMAAMRDTLKAL
QAETTRADAESREGLCLLRDHFDQAIQAYEAAVEYVLLHAVDHVRAVFSGSVPYLMLAGVVHGGWQMARAALVCNRRLAE
GSDDGFYRQKLGSALFYGAHILPRALSLSAAVRAGQVADTAADWAAVA
>AHV91061.1 hypothetical protein D560_1358 [Bordetella holmesii ATCC 51541]
MLLMRDQGPSRRFEGDSMALLDLRKLRSPQVSSLIRQKMNSRARLASSDDRVVKILEWYALSAGTGHIIEGDAAHNWRFV
EHELASAPPDADLPSLEYPFALQPIVDPMRREITSFEFLIRSQSGGSPEQLFTGLAPAQRYLADLESKASAFQLARRLSL
DGVKLSVNLFPMSLIGAVSAVD
>AHV91062.1 TIM-barrel, nifR3 family protein [Bordetella holmesii ATCC 51541]
MAASNPRLWDSVKTSRRLNHEGEIAPISVQIAGADPEMMAEAAIFNINKGARIIDINMGCPAKKVCNLASGSALLRHEDL
IARILDAVVAACAPKGVPVTLKTRTGWDRESRNALRVARLAEQSGIAALTLHGRTRCDLYTGHAEYDTIRAVKAEIGIPV
VANGDIDSPEKARHVLAYTGADAVMIGRAAQGRPWIFREVDHFLRTGQTLAAPSYAEMRDLLLEHLDDHYRFYGEHTGVR
TARKHIGWYIDSLPGAEAFRTQMNLIDTTAEQFRAVADWFDHSLMGGGNPSHAVTSNLLAV
>AHV91063.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELRHLRYFVVTAQTQHFTRAAELLGMAQPPLSQQIRELEREIGTPLFDRVGRGVVLSEAGRAFLPCAQHILARVAEAGD
IARRAARGEVGVLRLGFTESASFNDTVTGAIGAYQQAHPDVELRLEESQSESLVQSLAAGDLNAAFVRPPFALSGAIDYL
PLEEESLIAALPSGHALAGRTRIALADLRDDRFIDYSRKSGYGLSADIIAACRRQGFNPAIRQRAPQLSSAVNLVAAGLG
VVIVPASMRHMRARGIHYLPLELDWPRAVLGLAVRRGERAAVVNNLLRLLDIPAK
>AHV91064.1 chromosome segregation protein SMC [Bordetella holmesii ATCC 51541]
MRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEAKASELRGESMQDVIFNGSGNRKPAARASV
EMVFDNSEGRAAGQWSTYSEIAVRRVLTRDGTSSYYVNNQQVRRRDIHDIFLGTGLGARGYAIIGQGMINRLIEARPEEL
RVFLEEAAGVSRYKERRRETENRLSDTRENLTRLEDILRELGSQLEKLEAQAEVARQYRDLQADGEKKQFALWFLKESGA
REERDRKGQEMAQAQNHLEAAIAQLRAGEAALESRRQAHYAASDAVHQAQGLLYEANAQVSHLEAEIRHVVDSRNRLQAR
RDQLQAQIEEWNSQQEHCTEQIAAAEDDLTTAAARTEEARAAAEDAQDGLPAIEARVREAAAGRDEMRVALARVEQNLAL
AAQTQRDADRQIQALEQRRERLQQELRELHTPDVARLEQLAGDRYAGEEQLQAAQAELTALEGRVPEADTARSQAQSAAQ
QQAQALARLDARLAALVKLQEDVQKQGALEPWLAKHELASLGRLWQKLHVETGWEAALEAALRERMAALEVRNLDWTRAF
ADDAPPARLAFYQTPAASAAPVAAAGLTPLASLLRITDPDLRALLTEWLRGVYVAPDFAQALGARATLPAGAAFVVKAGH
LVDAHGVRFYAPDSEQAGMLARQQEIENLQREIKAQQLIADQSRSAVARAELAWQQVSQALGPARQRVGELTRRLHDVQL
EHSRLQQQAEQSGERARRLREDLQELAAQEEDLRATREEAEARFETLDTELAEHQGRFSDAEIDGESIAASAEAARARLR
ELERGAQEAEFAERGIQVRITDLQRNRQLALDQSQRAGSELAQLEVELSELDASATQAGLQDALEQRVEREEALSLARQE
LDNLSALLRGADEDRLQQERLLEPLRARITELQLQEQAARLAEEQFTEQLNAREVDRQTLAQELASMPEEWRRASWLQSE
VGKISRQIEALGSVNLAALDELSTSRERKTFLDSQQQDLLTAIETLEDAIRKIDRETRELLQETFNTVNGHFGELFPKLF
GGGEAKLTMTGDEILDAGVQVMAQPPGKRNSTIHLLSGGEKALTATALVFALFKLNPAPFCLLDEVDAPLDDANTERYAN
LVSNMSEQTQFLFISHNKIAMQMAKQLVGVTMQEQGVSRIVAVDIDSAVQMAAEAA
>AHV91065.1 fecR family protein [Bordetella holmesii ATCC 51541]
MRDFYPLSSVAADAATATGERRRYQLTDGTELLLDARSRVNLEFTATYRRLMLLEGAVAITTPDDPNRPFLVQTAEGAIQ
SSGKRYMVRQQARRTLVVAQDGDLDIETIGGTRGSIPQGMGARFDAARLDVARSELSSEAAWEGGWINANGRPLGVKIQ
>AHV91066.1 putative trxB2 protein [Bordetella holmesii ATCC 51541]
MGGLTADNPFADDWIVAAPGRTGQQIAGQIAESLARARVPLQLNAAAREVRPCKGGIELSVAGAAPPVRGRCLVIASGVR
ARGLPGQPPQTRWPGVLIGPGSPIVAQDYSGLSVAVLGGGDNAFENFVYVRNRGRARSTCMRVACERSNNGSSVPAARV
>AHV91067.1 MJ0042 family finger-like domain protein [Bordetella holmesii ATCC 51541]
MSLVTRCPHCATAFKVVADQLRVRNGLVRCGVCNTVFDGRACLVTPGEPDGAHRPPLPVVEQAVALPVWPAPVEPEPEPA
TRAATTVESRLAAAPVEPAAVVEPPAVLRTRQAMREAEPAQVPWHDDDVEPGQADDTGDDAAEDEPGQTPQADGWRHALR
GERRETTSQGWALSAEPQVWRRVPREPGLGAEAAESLHDEPALDNEQEPSIPGERRTRYSSATGSGRTPPEFLDDDRQRA
RGVGRRIWALACLLAALALGLQLLYVQRSSVASAVPWLRPVLEVACKPLGCTVGYGRRLERIAITSSSLRTPQGASSSAS
EGRSLMVLNVVMRNRYDKPQPWPALVLELTDISDTVVARKVLMPQDYLDSAQAAGPFAAGAEVTLAVPIEIQGINVNGYQ
LDKFFP
>AHV91068.1 sensory box protein [Bordetella holmesii ATCC 51541]
MTNVDAFELLATSVFLLNERGHIEYANAAAEDLFGRSRKQLRGQAAPTLFDHPEALQNSIDGAVGGKFSDVRQLSSLRRA
NESIEVNVTTVSCPGQRWPVLVETREIEQRVLADRNHRLVDEIESHRELLRNLAHEVKNPLGGLRGAAQLLEAELPSPAL
AEYTQVIISEADRLQALVDRLSGPQRVPLHARPVNIHEICERVCALIQAEFRDDVGIVRDYDASMPDVQGDAARLMQAVL
NVARNAAQELVLQKPGSGVSPRLITLRTRVARQVMLAHRHHRLALVLSIIDNGPGVPEHIRDRIFHPLVTARAGGTGLGL
SLAQDFVQQHGGIIEFESRPGHTEFRLVLPMEPF
>AHV91069.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MPTTLSKPGLDPIEHASRDELQALQLERLKWTVNHAYQNVAHYKKAFDDAGVHPDDLKQLSDIAKFPFTTKKDLRDNYPF
GMFAVPRERVSRVHASSGTTGKPTVVGYTARDLDNWANLVARSIRAAGGKAGDIIHVAYGYGLFTGGLGAHYGAERLGCT
VIPMSGGQTEKQVQLINDFRPDIIMVTPSYFCNILEEQRR
>AHV91070.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MALVKGLAGGPLLNDFIASVNRSLQAFVISAIIGVPLGVLLGSNEKLYRSVEFLIDFFRSTPSSALIPLFLMIFGVTDMN
KVAIAAFASLLVIVFNSAYGVLNARKQRVMAARVMGASRWRVFKDVLIWESLQQTFVGLRSGVSMALVIVIVAEMFIGAE
SGLGNRIINAQQVLNVREMYAAILAAGALGYLLNILFLLIEKRIVHWSGR
>AHV91071.1 putative siderophore receptor [Bordetella holmesii ATCC 51541]
MSITTRPAGGEPVAETTVTAISPLSRLRADGLGGQLQQYFAGSQGMLDYSLDLGARHNGASYDARGRRIASEPSQGDLFD
SNIYSLGGKLGLRIDDRQRVQLSASYYNADQDSDYGSDPRVASLPPGTAHALPLGGLELVDQNQIRNTMLNLEYEHLNVW
GSKLSAQVYYRDFYTRFTPFDARAVVTRGNHVDQVMQNSKVWGSRLTLDTPLAEHTRLLWGADFNQERSDMPIDIFDAAA
FDASGGRVFRKTGRLTYMPSLTTRSTGIFGQLEHRFNEQWSAHGVCVTSMRRPASVTSCRCRSCGSPIRPPSPAVRSITM
RCCRTSG
>AHV91072.1 GDSL-like Lipase/Acylhydrolase family protein [Bordetella holmesii ATCC 51541]
MVGDSLAAEYGLARGSGWVPLLARRLSEQYPNYQVVNASISGDTTSGGTARLPGLLKRHTPAVVVLELGSNDALRGLPLS
MTENNLAAMTQAAKGAGAKVLIVGMQIPPTMDAITPNALRVFSRPWPRKKG
>AHV91073.1 (S)-mandelate dehydrogenase [Bordetella holmesii ATCC 51541]
MSLNVADFRQRARRVLPRFVFDYVEGGAEDERCLARNRADLDRLDLLPQGLRDTRRVDTAVEILGQTWSAPFGVAPVGLA
GLLRPQGDVLAAAAAGAAGLPYVLSTASNSPLEAVRAATSGPCWMQLYVMQARAVAEQIVQRAQRAGFDALVLTIDVPVS
GYRERDARNGFSLPFRPGPAMLWDMVRHPRWLARMAAAGAPDFVNLAPPEQQASPQAQAALLARSMDCSLVWEDLAWLRS
LWRGPLLLKGVLHPEDARRAAGLGVDGVIVSNHGGRQLDAAPSAIRMLPRLRAAAGQGMPLFVDGGFRRGADIARALASG
ADGVFVGRPMAYGLAVGGQAGVQQVLNLLAAELARTMTLMGVVRPGEFGAIHLCNRDFDSRGSHG
>AHV91074.1 araC family transcriptional regulator [Bordetella holmesii ATCC 51541]
MTTVALDLGYESPAAFSTMVRRVLGRPPSSLVRGARPFVAGHPEAGFL
>AHV91075.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91076.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91077.1 bacterial Fe(2+) trafficking family protein [Bordetella holmesii ATCC 51541]
MARTIHCVKLKRDTEGLDFPPYPGELGARIWREISKEAWEEWKQVQTRLVNENRLNLADARARKYLQQQMERFLFEDGTV
EAQGYVPPSA
>AHV91078.1 uracil-DNA glycosylase [Bordetella holmesii ATCC 51541]
MAIDNRLLAHTLAAQVADLPTEWTRALAPPRVALALENIIGHVESRLAEGATVYPATPLRALGCLQPSAVRVVILGQDPY
HGPGQAQGLAFSVPDDCKCPPSLRNMFKEIGRDYALSGTPGHDLSPWVEQGVLLLNTSLTVEDGQPGSHAKKGWETVTDA
LFTRVAQDPVPKAFLLWGAHAQAKAALMPPGHPHLVLTANHPSPLSATRPPAPFIGCGHFRLTNEWLEKHGQTLIDWTRT
FKKNPRQAEFRL
>AHV91079.1 periplasmic binding domain protein [Bordetella holmesii ATCC 51541]
MMHYRSIAALALGLAFSSAQANDANGVKIGVLTDMAGVTADATGKGSVEAARMAIEEVGGRVLDKPVSLVVGDHQHKPDI
GSSLVRKWYDADGVDVVVDVPNSSVALAVQGIAREKKKLVLVSSAGTTALSQAQCSPYGVQWTYTTYALSRGTANAVVKE
GNKRWFILASDYAFGKQLAADTEAVVKADGGQVLGTVYHPLNASDFASFLLQAQASKAQIIGIANAGGDTISTIKQAAEF
GVSGGGQQLAAMLLLLTDVHSLGLQAAQKTYLTVPSYWDMNEGTRKFSKDFQARVGHPPTFLQAGVYGSVRHYLRAVQAA
GTTDSDAVMAKMKALPIDDAFSQNARIREDGLVVRDMMLAQVKTPEQSKGAWDYYNIVRTIPGDTLVWPLSESQCPLVKK
P
>AHV91080.1 nifU-like protein [Bordetella holmesii ATCC 51541]
MAYSDKVLDHYENPRNVGSFDKGDDSIGTGMVGAPACGDVMKLQIKVNDEGVIEDARFKTYGCGSAIASSSLVTEWVKGK
TLDQAMAIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGVAEAVAAD
>AHV91081.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MTSYVLRRLLYGVLILIGVNLFTFLLFFAVNTPDDMARLAIGGQRTSQDAIEKWKADRGYDKPLFVNNQQAGAQRFTDTV
FYQRSVPLLTMDFGASDAGRDIGREIKTRMWPSLALALPSFFLGLFASIVFSLTLVFFRATRLDFWGVVLCVVLLSISSL
FYIIAGQWLFAKLWQLVPYSGYAGGLDSIKFLALPVLVAVVSRLGPEARFYRSIFLEEIGKDYVRTARAKGLKESVVLFR
HVLRNALLPILTSTVSAIPLLFMGSLIAESFFGIPGLGSYTIDAISAQDFSIVRAMVFLGSALYILGLILADISYTLADP
RVRFE
>AHV91082.1 multi-copper polyphenol oxidoreductase laccase family protein [Bordetella holmesii ATCC 51541]
MMRGKKTEARNWRAWVGPGIGPQFFEVGPDVLQAFGVPGDAEAGHCFRPHAPGKWLADLPALARLRLLRAGVAQVELSGL
CTYEDDARFFSYRRDQETGRMALLAWLAPAN
>AHV91083.1 low molecular weight phosphotyrosine phosphatase family protein [Bordetella holmesii ATCC 51541]
MNDAGLGEVVRIDSAGTHAFHIGEAPDARAVAAARKRGYDISECLARQVTPEDFREYDLILAMDWDNLSALQQQCPKAYQ
HKLMLLMRFANDFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>AHV91084.1 hypothetical protein D560_2723 [Bordetella holmesii ATCC 51541]
MAAGPKQDTLPTTQLSTGIHVIQAEVADTDAKRRVGLMNRQELPGNSAMLFVFEEPDLQCFWMRNTPLPLSIAFIADDGT
ISNIEDMAPQTDDPHCSRKPVRYALEMSQGWFAQRGVKAGAKIDGLP
>AHV91085.1 bacterial transcriptional regulator family protein [Bordetella holmesii ATCC 51541]
MARLAAESGESVGLLVAVKDQAVCLDMVESQHPLRCSFVKGRGLPLVKGASAKSLLAFMPAARLQVRLEELGAAGADLAT
LERDLLVIRRQGYAMTDSEVDAGVWGVSVPVFRRPSQAVASITLMAPSTRAAARTQSLAAMTVAAAERISARLAAH
>AHV91086.1 DNA gyrase, B subunit [Bordetella holmesii ATCC 51541]
MSDQQNTTPENSGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEALAGYCDDIVVTIHTDNSISV
TDNGRGIPTDIHKDDEFGRSAAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSEWLRLTIRRNGQVHEMEFRQGE
RVAALAVTGTTDKRGTEVRFLADPVIFNNIEYHYEILAKRLRELSFLNNGVKIRLVDQRQGKEENFAFSGGVKGFVEYIN
RAKTVLHANVFAVSTESSAGGVPVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYITDNELAKKA
KVETTGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVRPAVEDAVARSLETWLLEHPNDAKSLCGKIVEAARAREAAR
KAREMTRRKSVLEGAGLPGKLADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQ
IATLITALGTGIGPDFNIEKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVTRGHIYIAQPPLYKVKVGREERYLK
DEVEEAKFMLQLALKDAELLPRQGATPIAGEALGELARQYVLADAVISRLARVFDVPALSALAEGVEINLDDQANAEVSA
KRLHDALHDATDLNGVEVVAEFLEEHDKYRLVIRRMHHGNVRISIIDADFVRGADYGILTKSAQTFLGLIGPGAIVARGE
GDKRKEQFVSDFREAMQWLRNEAERGLSKQRYKGLGEMNPEQLWETTMDPTVRRLLRVQIEDAIAADEVFTTLMGDDVEP
RRAFIETHALSAGNIDA
>AHV91087.1 nitronate monooxygenase family protein [Bordetella holmesii ATCC 51541]
MNDFTARLGLSLPIVQAPMAGVSTPAMAAAVSNAGALGALGLGAGNAQAARQAIDATRALTQRPFAVNVFCHRPGVADPV
SQAAWLRALAPHFAAFGAEPPDELREIYTSFQTDDEMLQMLLDTRPAVVSLHFGLPDRKKLQALQAAGIYLMATATQPDE
ARRVAEAGVDAIVAQGIEAGGHRGTFDDTARDERLGTLALTRLLSSRLQRPVIAAGGIMDGAGIAAAWPWARRPRNWAPP
SSPARNPPRTRPIARPCWATIT
>AHV91088.1 hypothetical protein D560_2113 [Bordetella holmesii ATCC 51541]
MSVPIRPLTESFAVAPQLGPDDMAGVAEAGYKSVIINRPDFEGGPDQPQAADVAKAAAAAGLAVEYQPVVGSAMTAADVA
RFAELLNTLPAPVLAYCRTGTRCTNLFVAAQQLA
>AHV91089.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MSFARFSRHYARTAVLLAMTGPALAQTGTQVPPHVQEMQAVQVLGTAEDEVKESLGVSIITAEEIQRRPPVNDLADIIRR
EPRVNLTGNSASGARGNSRQIDIRGMGPENTLIMIDGKPVSSRNSVRYGWNGDRDTRGDSNWVPAEDVERIEVIRGPAAA
RYGSGAMGGVVNVITKRPTDKTEASATYYVNQPEDSKEGNTNRVNFRLSAPISDTLSMRFYGNYNKTNPDARDINAGYAS
AGTAGVTSTAGREGVTNQDLNTMFSWKMDQSNTFDLDMGFSRQGNLYAGDTMNNANTVVSDAMYDHETNIMYRDNLSLTH
RGTYDWGTTRASVGYDYTRNSRREEGLAGGPEGAPTGNGFSTSRLKTWRADGEVNLPFHLGVSQVATLGVEYVRDTLDDP
SGLRQTYTGGTIAGTEAGNRDTKAKQNSYAFFVEDNIEATRSIILTPGVRLDHNSEFGSNWSPSLNASWAATDTFKIKGG
IARAYKAPNLYQSNPNYLLYSRGQGCLSSETNSNGCYLVGNADLSPEISVNKEIGFEYDPGTWRTSMAYFRNDYQNKIVA
GTDILYRLNNGARVLQWTNSGKALVQGLEGNLFIPIAHNVDWNTNFTYMIESKNKSTGQPLSVIPKYTINSTLDWFYTEK
LSFQANLTYYGKQTGPSVNERTGVDLSGDALQTVSPYALAGLSVGYEVNRNLRFRVGVSNVFDKKQYREGNASTAGAATY
NEPGRAYYATMTVSY
>AHV91090.1 hypothetical protein D560_3170 [Bordetella holmesii ATCC 51541]
MCGRAGAGQTGRAGLSCQSLRAGPRRATPLDQLGANADYGIGVYCINKQYA
>AHV91091.1 ribosomal protein L35 [Bordetella holmesii ATCC 51541]
MPKMKTKKSAAKRFQVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGSAAVHETNIASVKAMMPFA
>AHV91092.1 hypothetical protein D560_1053 [Bordetella holmesii ATCC 51541]
MADPQARRDTQAGHLLSRVRSGAGRGSTGCRASLFDRGDILAALSLSGPGDAESGEDQPPDHMHE
>AHV91093.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MAAYDFPSRNILVWALLLPLAVPTYIIAFAYLDLLHPIGPVQSVIRALLGYDSPRQFRLPDLRSLGGAIFVLGFVLYPYV
YLSTRIMFMTQAASLIEAARSLGASRTGVFFRVALPLARPAIAVGVSLALLETLNDIGASEFLGVQTLTVSVYTTWITRS
DLAGAAQIALTMLALVIALVLLERRGRRRQRYATTQRMRPMQPQRLRGLAALTACLLGWIPVILGFVAPALYLLAETYKR
LHLVGGVSGQLLASLGNTLLVAASATVITVLCGLAVAWAARNLGSGAGPARACARIASLGYAVPDTVLAIGLLTPFAWVD
QAAGRLLGWPGMLLMGTTGALVCAYTIRFLAISTGSVEAGLARIPPSLEQASRLLGETVGGTLRRVHLPLLRPALAAAAL
LVFVDTMKELPATLLLRPMNFDTLATWLYAEAARGTYEEGAVAALAIVLAGLAPVILLARSNLKMGH
>AHV91094.1 DNA-deoxyinosine glycosylase [Bordetella holmesii ATCC 51541]
MPGMISLQRNQYYANARNAFWPIAQALFKVDLHAGYDDRLTALQDAGVALWDVLSQCVRPGSLDAAIVAESAAPNDFVGF
LARHPCIEVIGLNGAKAAQLFRRHVVPTLAGGARQPRLVTLPSTSPAHAAQRFDSKLLAWRGLLEQV
>AHV91095.1 queuosine biosynthesis protein QueD [Bordetella holmesii ATCC 51541]
MISVTRRLEFDAGHRIPDHRSQCRNLHGHRYVLELTLTGDVVQAPGQSDNGMVMDFSDIKHIAKTHLVDIWDHAFLVYEG
DAAVRDFLASLPDHKTVILDRIPTAENLAAVIFGILAPTIRTPTGTISGCLASVCLKPPIAGRIATVTKRRPLARGLFSG
EAAARCVPLPRVRPACPA
>AHV91096.1 KDP operon transcriptional regulatory protein KdpE [Bordetella holmesii ATCC 51541]
MRSALEAEGCEVHETDTVRRGLIEAGTRQPDAVVLDLGLPDEDGMALLRELRGWTELPVLVLSARSSEGDKIAALDAGAD
DYLTKPFGVGELLARLRVLLRRHARGGAGNAAQAGFGDVQIDLARRVVTRAGEHVHLTQIEYRLLAALVASRGKVMTHRE
LLREVWGPSHVESHHYLRIYMGHLRQKLEADPARPRYLLTEIGVGYRYAGE
>AHV91097.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91098.1 receptor ligand binding region family protein [Bordetella holmesii ATCC 51541]
MDDGTDVSRAVKNMRKLTSEDKVDAIVGPNTTAAALAGLDVLAETGTPMVALAASAVIVEPVSDPKRTWAFKMPQNDSLM
ASVLVQDMKKKGVKSVAFIGFADSYGDSWWKEFSAAAKAAGLDIVAQERFQRTDASVVGQALKVIGAKPDAVLIAGAGTP
SALPQKTLLERGYKGPIYQTHGIGTLEFLQVGGRDVEGTLFPTGPAVVARELPADNPVKKVAMDFAEKYEAEHGAHSLTQ
FAGDAYGAWMLLDSAVARALKSGAKPGTPEFRRALRDALENTRDLAVPNGVLNISAKDHQGFDERARVMGVIKDGKFSYA
GQP
>AHV91099.1 glutamine synthetase, type I [Bordetella holmesii ATCC 51541]
MPAHTVDEDKLESGQAFDGSSIPGWKGIEVSDMLLIPDVNTANLDPFREEATMILTCDAVEPSDMKGYDRDPRSLAKRAE
AYLKSSGLGDTAFFGPEPEFFVFDGVTWNTDMSGTFVKIKSEEAPWSSGLEFEGGNMGHRPGLKGGYFPVPPVDSFQDMR
SEMCLLMEQMGVPVEVHHHEVAAPGQLEIGTKFSTLVTRGDWNQIVKYVIHNVAHAYGKTATFMPKPIVGDNGSGMHVHQ
SIWKDGQNLFAGNGYAGLSDFALYYIGGIIKHARALNAITNPGTNSYKRLVPHFEAPVKLAYSARNRSASIRIPYVGNPK
GRRIETRFPDPLANPYLAFSALMMAGLDGVQNKIHPGDPADKNLYDLPPEEDAKIPRVCASLEEALAALDKDREFLTRGG
VFSNEMLDAYIELKMADVTRLRMTTHPVEFDMYYSL
>AHV91100.1 hypothetical protein D560_2419 [Bordetella holmesii ATCC 51541]
MGQWRRNLPDTLLHITDSRPGLAMPLIGVQPGLQAGVVMRAGRTPIAAVPTT
>AHV91101.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV91102.1 fumarylacetoacetate (FAA) hydrolase family protein [Bordetella holmesii ATCC 51541]
MEYVIPPTPAVAVPVAGSNASFPVRRVYCVGRNYAEHAKEMGFTGREEPFFFNKPADAIVFVPDGDIGSIPYPPRTTNLH
YEMELVVVLAKGGKDIPVDQANECVWGYALGLDMTRRDLQGEAKKQGRPWEVGKGFDFSAPIGPIHPRSVVGTLNSGAIW
LDLNGERKQSSDISQMIWNIPESIAFLSTLFELQPGDIIFTGTPEGVGAVVQGDEIVGGIDGLGELRLRIA
>AHV91103.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91104.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MVFDQVLDAIYQGRLAPGSVINEVALAQEFGVSRGPVREAVRRLQGIQLVSREPYMKARVVTLSATSALELFQMRMALEG
VACNLATRRMSDDAIGQLHVELDDDRHRRQQAARGLGPQPRVFDFHERIVRASGNHRIINCLCGDLYHLLRVYRRHSGTV
LERKDDAYAEHWQILRAIQARDPELAESLMRSHIERAAQHLFDHLAEVLPELSGQALRPNESPGAARHESAQ
>AHV91105.1 pepSY-associated TM helix family protein [Bordetella holmesii ATCC 51541]
MKERHASQRRSYWLKTLHTWHWISSAICLLGMLLFAFTGLTLNNASHIESKARVETRHTRLPYAELAAVKEAATRRAARL
PQSAGAWLEREFGIDALRVKPEWSSEEAYLSLPRAGGDAWLSIDIQSGEVEYERTDRGWISYLNDLHKGRHTGLAWSWFL
DLFALACLVFSLTGLVLLKMHAGHRAATWPMVGLGVVIPVVLALLFIH
>AHV91106.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MLPRSALPLCLLTLLTACGVSSEIKAVDKDRYQIRYNAGAKAMTWVEIKNQARQQAEDYCGQKNQRYARPEVSSNHATGL
MPKEAVVTFSCEDKPAAAAGK
>AHV91107.1 cytochrome c family protein [Bordetella holmesii ATCC 51541]
MAARVAACTACHGAQGRAGPDGYYPRLAGKPASYLYQQLLHFRDGQRQYPPMTHLLTGLGDDYLREIASYFAQQSVPYPA
PAQDGTSHDALGRALVFEGDALRGLPACASCHGQSLGGRLPAIPGLLGLPRDYIVAQIGSWQNGLRHAAEPDCMAAVARK
LSPQEVGALSYWLSAQAVPQDYHPEPGGTSLPMTCGSQQEGAP
>AHV91108.1 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MVVGDDHTAVSSSIPHASETSLIGWHVPIVHPASIDEYETFALWGWALSRYSGAWVAFKVTSESVETGQSFDVRPAEHYD
MPDDAEAAERHYNAGDFLSPAIETRMARRHRAVAAFAARHSIDKLISAAPEATVGIVTVGKCHLDAMEALDRLGVDLRGV
RVYKPGLVWPLERERLLAFAQGLQHILVIEEKDGIVEAQIKDLLYNQQQRASVCGKQGFDGETLIPAAGQLRPSILAAPL
AGWLRRTSGLALAADPAAFACTEALSNAADGMRRRPYFCSGCPHNSSTKVPEGSQARSGVGCHYMAAWMDRDTGGLTQMG
GEGVDWIGVAPYIEAPHVFQNMGEGTYYHSGYLAIRQAVAARANITYKILFNDAVAMTGGQPVDGPISVPQICQQLRGEH
VARIVVTTDEPEKYRGIDLGPGIAVHHRRELDALQRELRETAGVTVLIHDQTCAAEKRRRRKKKTFPDPARRMFINSAVC
EGCGDCGTQSNCLSIVPLETPYGRKRAVDQSSCNKDYSCAEGFCPSFVSVEGGQPRKRRAAAQDDWQAQLANVPMPRIDE
VHTPYRLLVAGMGGTGVITIGALVSMAAHLQGLSASVLDLTGLAQKGGTVISHIRLAPPHTPAGPARLDWQQADAAILCD
PVAAV
>AHV91109.1 2Fe-2S iron-sulfur cluster binding domain protein [Bordetella holmesii ATCC 51541]
MSQPQFHTLKVAAVARNTRDAVVVTFDLPEPLRDAFAFRPGQYLTLRTELNGEEVRRSYSICSAPEDGILRVAIKHVDEG
VFSSWANHELQPGQDLQVMALAGNFTVEFSPEQERHYVAFAVGSGITPVFSLVKIALSTEPKSRFTLFFGNRASSSVLFR
EDIEDLKNRYMERFSLVYIMSRESQDIELFNGRLDGDKVEQLMNTWMAGDDVDYAFVCGPQTMIESVVQRLADRGMDKSR
VKFELFGALKGPRSLRTGSEAPVAPGKGQCEVTVIQDGHSRSFSIAKNQDSVLDSALAQGVELPYSCKGGVCSTCRCKVV
EGEVDMDANFALEDYEVARGFVLSCQSYPVSDRLVLDFDQET
>AHV91110.1 hemX family protein [Bordetella holmesii ATCC 51541]
MTDNTSSLPPSPSTGGPAERPPETAKPIKPARKGSALSTALIIVLLLAIGLGAALWNLRQQSAKNGREVAARLDRLSGDL
LQARNDVREALSLAQAQSGRVADLEGKVRETQSQYSALQQAMQNLNDGTSDEMLANDVDRMITVASQQLRLAGNVNNAVV
ALESAQARLARADRPRFASLQQAINGDLDRLRAVSTVDIPAVSGRIERLVTLVGRAPLIVPDTAAPDLTPQSATRARSMM
PAPATEPLPADAPWWQRWRAELGSWPGRAGAALTNELGDLIRVQRVDQPAALLLSTDQAADLRSVLHQRLLSLQLAMLMR
QPAVWKSELDNISDTLTKYFDPRSPETQAALSLTRDLAQTDIAVRVPDVADSLNGIAALRAAGFKSDEQD
>AHV91111.1 UDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE [Bordetella holmesii ATCC 51541]
MRRHDEVNAIADKHGIPVIEDAAQSFGATYKGKKSCNLSTIGCTSFFPSKPLGCYGDGGALFTNDDALAQAMREIRVHGQ
SGRYYHTRIGVGGRMDTLQCAVVLGKLERFDWEVQERLRIGARYQALLADLPAGARTVTVRPDRDSVWAQFTVMVPDRDN
VIAKLKDAGIPTAVHYPRPIHAQPAYAQFAAGDTPVSDTLAATVMSLPMHPDLDQATQDQIVSALKQALQ
>AHV91112.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLNIRAAASGYGASQVLFGVDLQIGAGQVVTLLGRNGMGKTTLLRTLFGQLPLRAGSIEFAGRDVSGWSPDRVARSGLAL
VPEGRQCFPNLTVREHLTAFVARRNPDIGLPWTPERVFELFPRLAERAGNMGNQLSGGEQQMLAIGRALVTNPRLLILDE
ATEGLAPKIREEIWQCLARLRSAGQTILVIDKYVERLLALADRHVILERGKVVWSGDSRALDADRTLWERYLGV
>AHV91113.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHN
>AHV91114.1 putative exported protein [Bordetella holmesii ATCC 51541]
MMRSGRGNDSAFNGELRFQAIGIQQGQTVTVELSPQQVKTDEAAAPVAVLPPAAAHALPGDEAATSKAGGTAALAPPNGT
SGAGVLALHFDQFQRSQGVLALPEGFVPESVTVTVLEEGTVRATRNVKLEF
>AHV91115.1 dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella holmesii ATCC 51541]
MNIRPTALAGVLLIEPHMLADDRGWFAERFRQDRFEAALNATGQALPGAFVQENHSRSGRGVLRGLHYQLAPQAQGKLVS
VVAGEVFDVAVDVRPGSASFGQWIGVTLSAADGRSLWIPAGFAHGFLSLAEGSEVLYKVTAYYSASHERALRWDDPAIGI
RWPAAPALMSARDAQAPGLHEAGRDGQLPV
>AHV91116.1 hypothetical protein D560_1911 [Bordetella holmesii ATCC 51541]
MELYSVIKIVHVLAITVWVLGLLWLSSVTGFSAASAASLRRMARWNHRLVLPAMALTWCCGLVMGGMVGWFGQLWLDVKV
ALVVLLTLLQLWQTRVLTRMLDKQEYRAPEWMSLAGATVFLLTALAITLAVAKPFF
>AHV91117.1 leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Bordetella holmesii ATCC 51541]
MKLSQRFTPLAVAIGALAFAGAVHAADTIKIGIPQPMTGPNTQYGDQIQAGALTAIESINAKGGVKGKKLEAILIDDGCE
PKQAVPAANRVVNSGAKFAVAHACSGVTVPAVNVYEQEGIVAITPGATSPLVTDTTKPHYFFRTIGRDDQQGPFAARYIA
NTIKPKKVAVLHDKQTYGSGVANQVKSALEKEKVNVALFEGINVGDSDYSAIITKLKSAGVDLVYFGGYHPELGLLLRQS
REQGLNVQFMGPEGTANQDLVAIAGPAIEGLLVTLPSDFTKLPGNEGIVKAFKDAKRDPDGAFQMPAYAAVQLIADGINA
VGEDPAKVADHLHKNSFDTAIGKVEYDAKGDLKDFEFAVFKWDKNGKKTQL
>AHV91118.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MTNANLYAVLASGFPQDRSKIALETPELEYTWDDIDQASACLANLLASLHLPKGARVAVQVEKSPEALLLYLATLRAGYV
YLPLNTAYREAEVQYFLENAEPSVVVCASKNLEWVERVALATGTQHVFTLDDDRSGTILAAAAGMPRTFRTVTRKPDDLA
AILYTSGTTGRSKGAMLSHGNLAHNAQVLNEYWGWRQDDVLLHMLPIFHVHGLFVASHGGALLAGARMIWLPKLDVEQAL
HYLPQSTMMMGVPTYYVRLLSDPRFTRDTCANMRVFISGSAPLLTETFNDFRQRSGYTILERYGMSETVMLTSNPYAQGS
GERLGGTVGRTLPGVQVRVVDDHGQPVPAGEIGNIQVRGPNVFSGYWRMPEKTRKSSLPMAGSERATSVVGAVRPPRAMC
QRITCPLSGAARI
>AHV91119.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MTALPPANAPDTQARALRWVGAALWRRRSPFVEALVATTVANLLALGTSMFSMQVYDRVIPNDGHQTLWVLTVGVSLAVI
LEFLLRLVRSRMQERVASSVDQSLSRRLFERMLRVRMEARPPMVGTLASQIKGFELVRGVLTSASLLVLADVPFAFLYIA
VIAMVGSWVALVPVVVAPLALLTGLGLQSLVRKHARRQQTAANRKAGLLVEAVDGAESIKANGAEPVLQARWSALVDEAA
ISERQSRDHSSLAQQLTVTLQQLGYVATIAFGAWLVSDNKITMGGLLACSILSNRALAPLIQLPGVMMQWAHARVALDSL
DHLLALPNEEDEREQTLKPGVIEPSVRFERVRFAYTREDQAALDVERLDIRQGERVGVLGAVGSGKSTLLKLASTLYRPQ
EGRILLSNLDAGQLDPVVARAAVGYLPQNLRLLSGTLRENILLGLPDPGDAVVLEAAGRTGLSRLICGQSKGLALPIAEG
GRGISGGQKQQLGLTRLLLSGPSLWLLDEPTGAMDADNEALVVRLLQQELQDGRRTALIATHKTALLPLFTRLIVMHGGR
ILLDGPRNEVIAKLNAANKPAEVVPA
>AHV91120.1 antibiotic biosynthesis monooxygenase family protein [Bordetella holmesii ATCC 51541]
MSHPVTMLVTRRISPQRYGAFLAWMRQGETLAAGFPGFLGSGVLQPPEGGDTYQIVLRFEDEASLKRWESSLPRRMWLER
GASLVQHSQVERVSGIESWFGARKFTPPRWKQAISIWLAYFPMLLLFSTLLNEQLSALPVFWRVLVTTLSMTPVLSFICI
PVISRVLHRWLHAGRA
>AHV91121.1 hypothetical protein D560_0143 [Bordetella holmesii ATCC 51541]
MKRDQAAAEPGDRAIAFWMTLTSGEATDADRHACAVWRAADPAHERAWGRLQQGLNQSVGRLESVMKTEYHALRSTLERP
ARRRILLNAAGLVGAAAVGAWATDHVTPWAMCWPIWALPRENAGPSHCRMAAC
>AHV91122.1 histidinol-phosphate transaminase [Bordetella holmesii ATCC 51541]
MSQYWSPVVATLSPYVPGEQPKLQNLVKLNTNENPYPPSPKVLQAIRAAASDALRLYPYPTSEGLCQAVARALAVEPDQV
FVGNGSDEILAHAFQAFFKHDGRPLLFPDISYSFYPVYCGLYQIEHQTIPLDESYGVVVDDYLPRAGCQAGGVILPNPNA
PTGRALSLTDIERLVTGNPQCVVLIDEAYVDFGADSAVALVGRHPNLLVVQTLSKSRSLAGLRVGFAIGHPALIDGLKRV
KDSFNSYPIDRIAAVGATAAMDDKAYFERTRQAVMASRQRLVAGLEELGFDVLPSAANFVFARHPAHDGGQLAAQLRERN
IIVRHFKRPRIDQFLRITVGTDADCSSLIAALKTLLN
>AHV91123.1 thioesterase superfamily protein [Bordetella holmesii ATCC 51541]
MTTKAHFTTLPAGREPVLRVMPMPADANIHGDVFGGWIMSQVDIAGSIPAARRAAGRVATVAVNAFQFKKPVFVGDLLSF
YAEVVKTGSTSVTVEVEVYAQRQRLDAEIVKVTDATLTYVATDEARRSRPLPSL
>AHV91124.1 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MPASGALTSAAINLITMHHLPDNTILVDESITQGREIGVHNVNSAPHDWLQLTGGAIGIGLPMATGAAIACPDRKVVTMQ
ADGSGMYTLQALWTQARERLDCLTIIYANNSYQTLHGEMRNVGVQEPGRNAQRMLDLVDPSLDWVSLARGMGVDAVRVDT
IEGFTQALLAGLNHKGPFVIAAQI
>AHV91125.1 excinuclease ABC subunit A [Bordetella holmesii ATCC 51541]
MDEIRIRGARTHNLKNVSLDLPRHRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQLMDKPDVDLIEGLS
PAISIEQKAAGHNPRSTVGTITEIHDYLCLLYARVGTPYCPDHGLPLQAQSVSQMVDAVLAWPADTRLAILAPIARARKG
SFEDECASLQAQGLVRLRVDGKLVEIDQMAPLKKTEKHDIDVVIDRLRARPESKQRLAESFETALQLADGRAIALDMDST
REHVFSSRYACPVCSHSLPELSLAAGAIRGWDKRNAFTHSLLTSLATHYEFDIETPFEELSDEIRDKVLYGSGDEEIAFF
YLNEKGRSSVKRHPFEGVIPNLERRWRETDSATVREELGKYRNIKTCPDCGGSRLRPEARHVLIGDEPGQGQERGRAIYE
VEAMPLSACLAWFQMLKLTGAKQEIAQRIVREIEARLSFLNNVGLTYLSLDRSADTISGGEAQRIRLASQIGSGLTGVMY
VLDEPSIGLHQRDNDRLISTLQHLRDLGNSVIVVEHDEDMIRLADWVVDMGPGAGEHGGQVVAQGRPETVEADPASLTGQ
YLSGAREIAIPQRRPVTDDLPWLELTGATGNNLKSVDLRLPAGRLVCVTGVSGSGKSTLINDTLAVAVARALNHAQGDAA
PYATLTGLEHFDKTISVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPEARTRGYDPGRFSFNVKGGRCEACQGDGVVKV
EMHFLPDIYVPCDVCHGKRYNRETLEIRYRGRNISQVLDLTVEQALEYFDSVPAIARKLQTLIDVGLSYIRLGQSATTLS
GGEAQRVKLSLELSRRSTGRTLYILDEPTTGLHFRDIEMLLEVLNQLVDSGNTVLIIEHNLDVIKTADWLIDMGPEGGDG
GGRVMAQGTPETVAEAAQSHTGHYLARVLQRNKNR
>AHV91126.1 bacterial regulatory s, luxR family protein [Bordetella holmesii ATCC 51541]
MVAQGGMWMGRSLVGRLLRTARNRAGTPADWGHALLTAREDTVARHASAGQSNAQIAEQLGITERTVKAHLSAVFEKVGV
ADRLQLALLVHGVTPAKTGH
>AHV91127.1 arsenite/antimonite efflux pump membrane family protein [Bordetella holmesii ATCC 51541]
MLALALFAFTLTLIIWQPRGLNVGWSACIGAALALLTGVVQLADIGAVWHIVWNATATFIAIIITSLILDEAGFFEWATL
HVARWGRGSGQRLFVLIVLLGAAVTALFANDGAALILTPIVMEMLLALGFGPAATLAFVMAAGFIADTGSIPLIVSNLVN
IVSADFFGLGFSQYAAIMVPVNIVAVGSSLAMLWLFFRRDLPARYNIADLPAPHTAIRDSLTFRAGWVVLTLLLAGFFLL
EPLGVPVSAIAALGAAGLLLIAGRRHIVGTRRIMREAPWHIVVFSLGMYLVVYGLRNAGLTQALTHLLERCADAGIWGAS
LGTGIATALLSSVMNNLPTVLIGALSIADAQVAHEGTRLAMIYANVIGSDLGPKITPIGSLATLLWLHVLARKGLHISWG
YYFRVGLVLTLPVLLATLAALAWRLSM
>AHV91128.1 HTH-type transcriptional repressor nsrR [Bordetella holmesii ATCC 51541]
MALARAADSYRVGQLLRVLEHQGALVDCGDPPCALEGACRLAGALNESLQRFYESLDRYTLAELVAPPTGAAIIRLHRAA
>AHV91129.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein [Bordetella holmesii ATCC 51541]
MWLLLRPRTFQVIMGLSLISYAVNLFIFGMGRLTVGRPPVVDPLVPPDPSVYADPLPQALVLTAIVIGFATTALFLVVLL
ASRGLTGTDHVDGREPES
>AHV91130.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bordetella holmesii ATCC 51541]
MEKQSGDLDPVPVFSFMGSASLHPRQLSCWITHTNERTHDIIRGGLNRSPMYSGVIEGVGPRYCPSIEDKILRFADKSSH
QVFLEPEGLDTHEVYPNGVSTSLPFDVQYELIHSLPGLEHAHILRPGYAIEYDYFDPRGLNSSLETKAISGLFFAGQING
TTGYEEAAAQGLLAGVNAARHALERELWVPRRDEAYLGVLVDDLVTRGVTEPYRMFTSRAEYRLSLREDNADLRLTEIGR
ELGLVDDARWDAFNRKRDAVEAEVQRLQSTWVNPRLLPEGPAEALLGKAIEREYSLADLLKRPNINYEALMQALDGQGEL
LAGPGVLGDDVLAEQVEIQIKYAGYIARQRDEVQKHSSQEQQPIPADLDYDAVTSLSFEVRQKLKTHRPQTVGQAARVSG
VTPAAISLLLIHLKRLHYGSRKQAA
>AHV91131.1 NUDIX domain protein [Bordetella holmesii ATCC 51541]
MLRLPSLPAPDRLDRLSATLRDKAIQPPPEQARPVYIAGQRCGWATLAACDALRDSGLVNIDDDALHLLPELAPGPALDA
ALAKVAQTLRQARCLRGWRDELLDITAESLHLGAIERAAMRPLGLPTFAVHLNAWTADGRLWVARRALSKSTDPGMWDTL
VGGLVGSQESLDQALVRECAEEAGLEPEQIRQRSPLRTVLRMQRRLPEGYQVEALLNSTCVLDDATRPANRDGEVMEIAT
LEVGQVVDRIEAGEFTLEAALVILDDIRYRSAT
>AHV91132.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDEHFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV91133.1 hypothetical protein D560_1932 [Bordetella holmesii ATCC 51541]
MTATDFTQLIARAERVLAQLEAWLPPAPPDIDWSAQAFRWRKRGSRGWLDAVRHVARIQKDDLQHIERQKDIIDRNTRQF
LDAKPANNVLMTGARGTGKSSLVKAMLATYGERGLRLIEVDKSDLGDLPEIVELVANRPERFIVFCDDLSFEEGEAGYKA
LKSVLDGSVAAGGDNVLIYATSNRRHLMPEYMSENLQAKHQADGEIHPGETVEEKISLSERFGLWLSFYPFKQDDYLDIV
HHWLRELNCPADQIEPSRAEALQWALERGSRSGRVAYQFARDWAARHV
>AHV91134.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLIDGKDISGTPPWKRNIGMVFQNYALWPHMTVWDNVAFGLVERKLPRAQIQERVQDALELVGLAQFAKRRPNQLSGGQQ
QRVALARTIVIEPQVLLLDEPLSNLDKKLRVQMRQDLLALQRRLGITTIFVSHGRRKP
>AHV91135.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MPADPVQLAPVEVTASPGPKVDNSASPKYTQPVLDIPQTINIIPDSVREEQNAHGLRQVLNNVSGVTFNAGEGGGGLGDN
VNVRGFNASTNFQIDGLRDSGQSNRSDLFNYESVEVIKGPNSVFGGAGTTGGSINLITKRPRQENFVHAETGLGTDRYRR
VALDANRTLPEAAAAWRLNLMAHGNDVPGRDPVDRKRWGIAPSLKLGVGGPTQWTLSYFYQTDRNLPDYGLPARNGRPLV
GRHAYFGWRNLDHEHAHSHIATSEVIHRFGSGATLQNLTRYSQLDRDTVISASQISLMGLQPGYYKPAGPRATAGT
>AHV91136.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKLKQIMRGLCAAAALALGAAQAATERPLVLVVPYPPGGSTDILARIMQPRLSQELGGRPVVVENRVGAASQIASAFVAR
SEPDGNTLLVSFDNHAINPAVRNNLPYDTFKDFKGISQTVRFPLVIGANPKVPGKNLAEFLAVAGKEPANKYNYASTGVG
SLNHLAPEELKQRSKVDLLHVPYSGAGPAVQAVVGGQADMTWLSFAALRGQIQAGKIKPLAVAGEKRLPDLPDVPTLGES
GFPGLVAYSWSGMFAPAGTPEPVIKTLTTAFQTVLKDSEVRHKLEEAGFEVVGSDGPALDAYVKGEFERWDAFIKDSKIS
LEN
>AHV91137.1 acyl-CoA dehydrogenase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MASGQKLASYCLTEPNAGSDAASLVTRAERHGGDFLINGAKAFISGGGDTDLLVVMARTGGAGPGGVLAFAVPADAAGIS
YGRKEAKMGWNSQSTRPITFENVRVPAHYLLGAEGEGFKIAMKGLDGGRINIGTCSVGAAQGALDAARRYMDERRQFNRK
LAEFQALQFKLADMATHLVAARQMVRLAACKLDSGSADAGTYCAMAKRFATDMGFQICLDAQQIHGGYGYLRDYPLERLV
RDTRVHQILEGTNEIMRVIVARQLLDKGVDIR
>AHV91138.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MRVRGLKAGYGRIEVLHGIDLDLPRGKLVALVGANGAGKTTLLRTLSGLVPARAGSIELLGNDIGRTSADTRVRLGLAQV
LEGRQVFGPLSVEDNLLLGGYVRGRQARERMDEMFALFPVLQQKRGLPAGTLSGGQQQMLAIARALMSRPKVLLLDEPSM
GLAPLLVREVLEVVARLRDLDMPVLLVEQNVRAALALADQAYVLEVGRITVAGTGQELLRDPRVMQAYLGL
>AHV91139.1 D-aminopeptidase family protein [Bordetella holmesii ATCC 51541]
MKILISTDIEGVAGVFHAEQVRPGNGEYERARAWMTGEANAAVAGAFAGGATEVLVNDSHGGFRNLLPDQIDERARLVLG
KPRYLGMMGGLEEGCDAVMMVGYHTRSQGRGVLAHTINSAAFARVSINGMELGEAGLYGALAGELGVPVILGCGDDAFIE
ETRPLFPGAQWVQTKVAHGQGSGVTLTPAAARRAISTGAEAATRNLARAVPFHIAGPIECRLQTQSSALADLFCMWPTLE
RVDGVTLSFTVPTMQAAIRTLNSLAAMSFMLR
>AHV91140.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MQQRAVPTRNIVAAVIGNALEWYDFLVFAFMTPIIAKLFFPVDPNVAGSELNSILMTTAIFGVGFFMRPVGGILLGLYGD
RKGRKAAMVLVTSLMAVSIALITVAPTYHAAGILAPIFILIARLLQGFSAGGEFGTSTALLIEMAPDERRGFYGSWQMAG
QMLALLIGAAFGTLITEVFTPAQIEAWAWRVPFAFGLVIVPIAIYIRRNLDETATFKRIKAEESAPSRGAVQRLTLGQML
ARHTRETLIGVGLVVTATVSIYITFTYLVTYSTKILNLPISETFLVQMAGAAVMVVLTPFMGAWSDRVGRRPLVIGSLIG
YLVVLYPLYAWLTAAPSIERLLTVQLVVCLFVSAFFGVFSTVMAELFPARVRSVGLSLAYNVAVMIFGGFAQFIVTWLIK
TTGSPMAPAYYVMFGVALGLVASFFIQDKTRQPLDDH
>AHV91141.1 glycosyltransferase 9 family protein [Bordetella holmesii ATCC 51541]
MSLPSLHLLQQTGLPLVICARPWARDLLDGLPKAGFLPMTGKWRSDRATVARHRDGPSRGLLLPDSLSSAAVFRLAGVPS
AGYRDDGRSLLLRWPMDKPAQDVHAVQSWYYLTRAALQTWGLPVGAPEAGSSLDLPVTERHRNECEAALAAAGLSHLPFV
LIAPTATGLHRGKVKVWPQFDALTRVLQGMGYTVVMCPPASEVEEARRNAPTATLLPPLGLGAFACLTTRARLVICNDSG
VSHIAAAAGARELALFGVTRRERTGPWSARAVCLGAEDVWPTLAEVEATAREQLQGCLP
>AHV91142.1 HMGL-like family protein [Bordetella holmesii ATCC 51541]
MPLPSRVKIVEVSPRDGLQNEKAFVPTDIKVELVNRLSLAGIPNVEAASFVSPKWVPQMADGAQVMARITRQPGTIYSVL
TPNLKGLEGALAAKADEIVIFGAASEAFSQKNINCSIAEFIARFEPVAEAARAAGVRVRGSISCALGCPYQGDVPIANVV
DVARRFLALGCDEIDVADTIGVGTPQRVRDVMSAVSAIVDPARLSGHFHDTYGQALANILAALETGITIFHSSVSGLGGC
PYAKGATGNVATEDVLYMLRGLNIDTGVDFDAVVDIGQWMAAHLGRRGSSRAGNAIAAKRQD
>AHV91143.1 YGGT family protein [Bordetella holmesii ATCC 51541]
MIGDILRFLIDILFTLFGAALLLRAWMHAVRLHPFNPLARAIYQATNWLILPLRRVIPATGSVDWTSLFAAWLAALLFFV
LVILVTLGMLPPASALPRILLTALFTEMRWALNLIVWLTLIQAVLSWINPMSPLMALLQTLTAPLLDPIRRILPRTAIDF
SPLVLLIVAQIAAMMLTRLSYGGI
>AHV91144.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MPNQQRARKYVALPLTSPVVPALLALSAVFATCAPPAQAQQAPNTVQSELPEFQIAAGPLAPALRQLAGTAGIMLTFTAE
QTDGKQTAGLQGRHASSSALALLLAGTGLQAVQLDTGAFVLRQAPPLSQDAATLPLVTVTASAAAPGTTEGTQSYTTDST
STATRMNLSMRETPQATTVMTRQRIQDQGLATVNDVVQAAPGLTYRRFGPERVSFFARGMYIDNIMYDGLPVALDSSNLS
QDLLVTDMAIYDHVEIVRGATGLVQGAGNPAAAINMVRKRPTRQAQVSATATGGSRDRYRGELDASGPLSEDGSLRGRAV
IATQDYGSYKRGESSSGQTFYGILEKDLGQATTVTLSALHQESRVHGNGFTGLPVGRDGGNLDLPRSTSYANDWEHWNKT
TDSAFAAVEHRFDNGWRMHMSAYYAQADIDMLGHYLSYNMTSGRYSQLGARNLQKEKQSSVDMYASGPFDLLGRTHELVL
GSSYRHIDFDGNSRQGVVLNSNLDLYNFDPSAVANPNIPLRDWMDTSVTQRSVYATTRLSLADRLKMILGARLDWFDYHD
TVNTYPNFNANTPSVTAHNRYSIDNQLTKYAGLIYDVDDHHSVYVSYTDIFKPQNYLDANNKLLDPVVGQNYEFGVKGEY
FDGALNTSAAVFRMDQKNRAFRATDQTQCSGYPTVTCYSAAGEVRSQGVEFEVQGAITPNWQVSVGYTVAIARYRKDANA
ANVGELFDTDTPRHLFKLSTMYRMTGALQGWRIGGSFYRQGAIYNQGTTSGVPFRISQSAYTITDLVLGWQATPKLDLQL
NINNVFDKKYYNALSGSVSFPSNVYGEPRNAMLTARYQF
>AHV91145.1 cystathionine beta-lyase 4 domain protein [Bordetella holmesii ATCC 51541]
MAYRQSHIATAQWRTRSRGEALPAGAVIIAADARVAELYARDYAGHADAELLMDTPGQWEAAGLPLARTPDLPADEACID
FLFFVHDRHQGNRQAAIQYLQWETSLTAQIDERERAAFRFMT
>AHV91146.1 dihydrodipicolinate synthetase family protein [Bordetella holmesii ATCC 51541]
MYGGNANFYNIEVSEYAAVVDALAAAAGAQTWVLPSVGPDYGKLMDQAAILRTRDFPTAMLLPMAFPYTDAGLTDGVRRF
TDRLGRPAVLYIKAANYLAPATLAQLIEEGRIVAVKYAVVRADPAQDDYLAALLQEVDAQHVVSGIGERPAIVHFRRFGL
KSFTSGSVCVAPRGSMQLLRSLQAGQFEQAERLRATYMPLEDCRDEISPIRVLHEAVTLAGVADMGPMLPLLSGLDAAER
ARVAPVARALREQDGQATRLP
>AHV91147.1 hypothetical protein D560_0113 [Bordetella holmesii ATCC 51541]
MSHTTFSGRLAELGKRLPAVNPPRGSYVPAVLAGELLFIAGQAPRLDGVLKYAGRVGRDLSVQAGREAAELCALNVLAHL
AAACNDELSRVVGAVRLAGVVNCAEDFDAHSKVLDGASELIAAVLGERGRHARIATGASSLPSGMAVEVEAIFQIKP
>AHV91148.1 D-alanyl-D-alanine carboxypeptidase family protein [Bordetella holmesii ATCC 51541]
MAFPWIRALASAFAPLALAVATLHSANALAAKPADPCKTNAKSAECKAAKKKAASASKSASTKKTTSKVSSKTASKTSAK
TTSQAKKSSAAKTASSKKTTTRAKTRAVSSAALPAAAASPAAEARALRSSTAYVQDLETSTVLFAKNENVVRPIASISKL
MTALVVVDANQPMNEIIEVTDEDVDTLKHTTSRLRVGTRLSRGDMLHLALMSSENRAAHALGRNYPGGLSAFVQAMNAKA
RSLGMINTHFIEPTGLSSENVSSPHDLARLLRAAAQRPLIHRYSTDTEYDVEINKRTQTFRNTNLLVRKPDWDIKVSKTG
FINEAGECLVMLARINGRDMAIVLLDSQGKFSRIGDAVRIRRILQSDVAML
>AHV91149.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MRGFEISAYTGGLYRDGGKYSVNVYNGQQEPYGLERVELLKGASSVLYGASGPGGIINTVTKRPTTETLRELNLESGSFD
RKQLSGDFGGALSDDGVWSYRTTFLARDSKTATDYIDDDRRFLAGGLTWRPSARTSLTLLADYQKDKAAENLGLPAKGSV
YSTRYDRIPTNRFTGTAGYDGYDAERYTAGWLFEHAFNDTVTLRNNVRYYDFRSTFPETLTYNLAADERTSTTRYALDRS
DNSQAVVADTALQFKFGQGALQHTALVGVDYTRMRHQTTREQRRAQPFDYFDPDYGIPVGDVYRSQGKSTDRTHRLGLYA
QDQIKIAEKLVVLLGGRYDDVVYRSHNSIYPSQEVDDEKSHALTGRAGLVYLFDNGVAPFFSYSESFEPESGADRNGSRF
KPVTGEQYELGVRYQPPGSDLMLSAAVYQLKRKNMSVSDPLDPSYNIQVGEVRSRGFELEARGRVGRNTHVIAAYAYTDA
RTTKASPLAPEDEGMRIGQVPYHQFSLWTDYSFGDFGLAGLTVGAGMRFVDSTHFLYGTGKVPAYTLVDAMVSYSTGPWR
FALNASNLTDKRYVAVCQSACFYGEPRRIIGSVSYRW
>AHV91150.1 translation initiation factor IF-1 [Bordetella holmesii ATCC 51541]
MSKDDVIQMQGEVLENLPNATFRVKLENGHVVLGHISGKMRMHYIRILPGDKVTVELTPYDLTRARIVFRSK
>AHV91151.1 threonine synthase [Bordetella holmesii ATCC 51541]
MKYVSTRGGMAPQEFSDTLLEGLAPDGGLAVPQQLPKVGTATLESWRALSYADLAVEVLSLFATDIPREDLSRLAHAAYN
EQVFSSEQIVPLRPLAGGLQLLGLSEGPTLAFKDMAMQFLGQVFEYVLTKRGTTLNIVGATSGDTGSAAEYALRGKHGVS
VFMLSPHGRMSSFQRAQMYSLQDENIHNIAVKGVFDQAQDIVKALSADLAFKTRYRIGAVNSINWARIASQVVYYFHGWL
RATSGAGQEVSFAVPSGNFGNILSGHIARRMGLPVRRLVLATNENNVLEEFFRTGVYRPRAPENTYATSSPSMDISRASN
FERFIYDLMGGDGERVRALWQELAEKGSFDLSAQRNCLALDYGFAAGASTHDGRLSTIRAVFDETGVLIDPHTADGVHVA
RRFVEDGVPMLVLETALPAKFSDTIEEALGRAVPPPAELAGLESLPQRVTVMDCDAGQVRAFIEAHAQV
>AHV91152.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MPTPARPPDDELLEPAAQAQGTVLFARLLKHMRLRQLQLLVALQQSGSVVKAAALLHMSQSAATQSLAEMERILGISLFD
RHARGLRPTLAGHTLVDTARGILAALEESAESLAAIRRGARAALRLGTTPAASLSVLSPLLSEFYEKHADLHIDVHEDTG
ERLLPQLFKGGVDAVFCRKPALLPASFVFKALQEDRPVVIASIHHTLAGRPDLSLQALKDSRWVFPTAHLAVRDIFEREV
LTALPDALRVPISTVSLAIFSRFLNKPDAVALMPQSVTPGMPLGSSLSQLSVQLKSPLAPLGVVFHKDQAPALLGQMLRR
WRR
>AHV91153.1 phosphomethylpyrimidine kinase family protein [Bordetella holmesii ATCC 51541]
MPASLPERIERSQFPALFAPRAPDSHKGSFGSLAVVGGGPGMTGAALLVARAALKLGAGKVLVGLAQQTIPLSCDFLQPE
LMVRQAADLLASERHLTAWTAGCGIGTTALAAHTLAELFQRRRSAPMVLDADGLNLLATGQLRPNWGQGPVVLTPHPAEA
ARLLGRTTAQVQAARPAAARELAHRYGAWIVLKGAGSLVCAPDGACLQNATGNPGLASAGTGDVLAGMLGSLLAQALPPE
QAVAGAVWLHGAAADALVAQGQGPIGLTAGELADAARAIRNGRWLGP
>AHV91154.1 thioesterase superfamily protein [Bordetella holmesii ATCC 51541]
MDTPTASARVSVPEFRLLLAEQHPFSVVLGIEVEAIGPGTALLRLPPSPSHQRLGGIVAGPMLMGLADVAMYAAVVGATG
QPRAVTASLTINFLRKTPAAAVMAEARLLKVGRLTTGEVTLRAEQGGDPLAHIVSTWSVPAP
>AHV91155.1 transposase family protein [Bordetella holmesii ATCC 51541]
MTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMDEFALHKGHRYATVVVDPIRRQV
LWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHVVAKYGREVIDRVRVDQANQLRH
DKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQHPGYARQAWDHWLQQAQGSGIAA
LAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSAFPGIPR
>AHV91156.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MLIFLAIWKAAQVWEWAPRGTLPDPFALPGALMREWRDGRLLPAVGSSLVHYFWGLALGTLFGFGVGLAAATTQRFDMLQ
AWLARVLRPIPPLAWVVFAIAWFKVSHAGAAFVIAIGVFWVNYFATYAAVRNVDPRLYELARAFGHGSYLARAWSITLPA
ISPGALAGVRAGIGQAWMTLIAAELLGVPGMGQEMNAAAGVGAYDAVVVYMLTISLVYTLCDFAYGQLEKRVLQWRP
>AHV91157.1 hypothetical protein D560_0106 [Bordetella holmesii ATCC 51541]
MANKVEPLITPDEVQEILAEPKETVKPISWVHRPLNASGTAAPGLWMEFGSACKVKGEVREDVIFRVFYRSPRTSVQGQA
AIMMGETFSASLFVGPHRVLSVDSDDSFHSSLVGNGLPNYRRVLTDRSHQHIWVAEGEGYAEPIIPALSSISALIDYFLP
RANLTLAGGFAHPLKGRQIELIL
>AHV91158.1 cu(I)-responsive transcriptional regulator [Bordetella holmesii ATCC 51541]
MNIGQAAGATGISAKMIRYYESIGLINPAARNEAGYRRYGPEDLHTLRFIRRARNLGFSVEQMQELLALWRDRSRASADV
KRIALQHVAELERKVAELREMANTLKHLARHCQGDDRPDCPIIADLILSKN
>AHV91159.1 nickel import ATP-binding protein NikE [Bordetella holmesii ATCC 51541]
MVDRAQTLALPENRVVQVEDLTVRFVTSERTVEAVRNLSFHVDRGETLAIVGESGSGKSVTSLSLMRLIEHGGGRIAQGS
MALRRRNGSIVDLTRASSRTMRSVRGADMAMIFQEPMTSLNPVFTAGDQIAETIRLHQGKDAAAARAEALRMLEQVRIPE
AKSVLDRYPHQLSGGMRQRVMIAMALACKPALLIADEPTTALDVTIQAQILQLIRQLQDEMHMGVVFITHDMGVVAEVAD
RVLVMYRGDSVEQGPSEQIFAAPRHHYTQALLSAVPRLGSMQGTDLPARFPLLQLNGREQPEAEEGSAGRAPRLDQGPVL
SVRNLVTRFDLRGGIFSRVQRRVHAVEKISFDLYPGETLSLVGESGCGKSTTGRSLLRLVDSHSGEILFGGRDIVKIKNA
ELQSLRRDIQFVFQDPFASLDPRVTVGFSIMEPLLVHGVASGRAAEDRVAELLERVGLPAEMAQRYPHEFSGGQRQRICI
ARALALNPKVVVADESVSALDVSIQAQIVNLLIDLQRDLGVSFLFISHDMAVVERISHRVAVMYLGQIVEIGPRREIFEN
PQHPYTKKLMSAVPIADPARRHIERALLSEDIPSPIRKVGDEPVIQPLVQVSPGHFVARHAVGGAY
>AHV91160.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>AHV91161.1 glutamate 5-kinase [Bordetella holmesii ATCC 51541]
MVAKVGSSLVTNEGRGLDRVAVSHWAAQIAGLHKQGRQVVLVSSGAIAEGMARLGWRKRPSVMHELQAAAAVGQMGLCQA
YEAAFAEHGLRTAQILLTHEDMADRRRYLNARSTLFALLRMGVVPIVNENDTVVTDEIRLGDNDTLGALVTNLIEADSLI
ILTDQRGLYEADPRKHPDARFISHASAGDAALESMAGGAGSGVGTGGMLTKILAAKRAAHSGAHTVIASGRERDVLTRLA
QGECIGTELQASLPVWSARKQWMADHLRLRGRLVLDDGAVRALLNEGKSLLPIGVTEVQGEFERGDVVACVDAVGRECAR
GLVNYSSSDTRRIMRHPSSQIAAILGDMTDPELVHRDNLVITE
>AHV91162.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91163.1 magnesium transporter [Bordetella holmesii ATCC 51541]
MTQSAAQKPPTTPRRLDPEDAQHALEEVQECLRRQQLVSDLVHRQEQGDLVEDLVHRQQQAELQTLINRLHPADIAFILE
SLPKDERQQVWHLVSPEHDADVLLEVEDWVRESLIEAMDRQDLVAATGNMDADELADLAPDLPPDVVAEVQKGLTEEERA
QLLEAMGYPEDSVGAIMDFEMVRVREDVSLEVVLRYLRRLHELPDHTDQIFVVDRQDKLQGVLPIAVLLVSEPETEVRSV
MNTDYLTLGPLDSDADAAGAFERYDLVSAPVTDDQGRLIGRVTIADVVDVMREDSQEQALSRAGLQEEDIFAPVSMALRN
RAPWLLFNLCTAATASFVASRFEGTVSHIVILAFLMSIVAGIGGNSGNQTMTMIIRALAVGRITGRNIWQLVKREMLVTL
LVGLCGSLVAAAFAWAISGSLSIALVMMAAMICNMLVGAGVGVLVPMVRARFGKDPAIGSSVLLTFATDSLGFFIFLGLA
TIFLL
>AHV91164.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MRLSLHLLLSIVLLMGLLLFGVLLTSLWSATRDAEAYQASRAREAASSLAWAIGRFDGDSQNWLTRLPAANAEGPRLRID
EASLGRSIPLWPASAEPPPDLAVLARSPYQSADGASEGHVVAYAAPSDAAPAAYLAGMAAQALLFVLATLGWCLYVRHLM
RWMRQGPLQSLARAAHGQDDGQSAELSDLLPVREALANNRREQEHVVARLQQRIAMLENEATREAVTRLPNRKTFFERFR
EILRGQATLASGHVLIFRQRDMAEINRRMHHEATDQWLRLSATQLQQTIREHAGPQAMLARLNGSDFVALLPGLAAQPAL
ALSERVRRELRLRRLPLRQHEWCRWAIALGRYEAGEEVGAVMARLDNALMCAETANDDVLQMAEFAGERRMDGEYRWQDL
ITQALDEHRFYLEVHPRSDSAGHLLHEEARMMLRGADALPASVFMPAASRLGLAADCDIQAIRLALDTRSRQAGPLALPL
AQASLAQPNFLARLKSLLDDRPAQSRHLILEIDAHSVVDYYDTVRSLCEICATLGTRIGVQRLSEQLSAIEKLHQLPLVY
LKIGGGFVRSLASSPGNRQLASTIVRTAIALNIPAYACDAQDESQTALLCSLGFIVLKRLTNEDAPLDEAISHAGLHLEP
IAAPEPSLLMKRQEHSEKRLSEMAGALQSHRQLQALLSHELRTPAATISAAAQSLETILAGSGQEVDSRLARIRRAVGRM
IDIIDQMLSPERRDDQVMAPRLEIVDLGELAHNVCASMQADSAHPLIVRNNTPAAARCDPLLTALVLRNLVQNAIKYSPA
DQPVVIDAGVATAQDQQAMAWLAVSDNGPGLDEAEIDAIFEPHFRSTAHRETPGVGLGLHLAREICISQEGNLTAQARPG
LGTRFLIALPASGQADQPAPAELL
>AHV91165.1 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein [Bordetella holmesii ATCC 51541]
MTVIIKEEDLIQSIADGIQFISYYHPLDYIRHLARAYEREESPAARDAMAQILTNSRMCAEGKRPLCQDTGIVNVFLKIG
MDVRFETKRSLQELCDEGVRRGYTNPDNPLRASVLDDPLFARKNTRDNTPCILHVDLVPGATVDVQVASKGGGSENKTKF
VMLNPSDSLVDWVLKTVPTMGAGWCPPGMLGIGVGGTAEKAMLMAKQSLMEDIDMYELLARGPQNKLEELRIELYEKVNA
LGIGAQGLGGLTTVLDVKINTFPTHAASKPVAMIPNCAATRHAHFVLDGSGPARLDPPALSEWPDVHWAPDYNKSKQVNL
DTLTREEVASWQPGQTLLLSGKMLTGRDAAHKRIQDMLARGETLPVDFTNRVIYYVGPVDPVGDEVVGPAGPTTATRMDK
FTDMMLAQTGLISMIGKSERGQVAIEAIKKHQSAYLMAVGGAAYLVSKAIRQARVLAFEDLGMEAIYEFDVKDMPVTVAV
DAQGVSVHTTGPKEWQAKIGKIPVAVA
>AHV91166.1 deoR-like helix-turn-helix domain protein [Bordetella holmesii ATCC 51541]
MADSPLPLYHKVYLLIRQRLLAGGFAPQTALPGENALAAEYGVSRLTIRRSLEALEADGLIERHQGRGTFAALQSAASST
QHSSDMDSLMVHLARMGMQTQVTLLALDTIAASSLIAAHLEQAPGTAVQRAIRVRSHENQPFSYLTTYVPQTIGQAITHA
DLVSKPLLAIFRDLGIQVARAEQTISAVLAEPDAAAALNVPVGSALLSLQRRVRAADGQPVEWLHALYRPDRYKYRMDMQ
AHNMPGQPTWLPAGTPST
>AHV91167.1 phosphomethylpyrimidine kinase family protein [Bordetella holmesii ATCC 51541]
MVEHMRLAQWQSDGSIDTSGSPSPAHALLAGGAQWALVLASPVRPGHLANVLVGQDGSSYSWPWQAPPPRSGDTGGLLAA
AAAALLASGKDIPAAVEQALPHAERGLAASFTAGMGRPLPNRLPQP
>AHV91168.1 O-Antigen ligase family protein [Bordetella holmesii ATCC 51541]
MPVVQLKIFAVLALLIPALALVSKGGGVAVFYTLAVLTSLAIMVYAGRGRAQPSWRDLAWPGAVLAVPLLSMLVTNAYLG
IWSGSEFEKLLRFALALPLFWVLLCVPRPWLQQIQWSLLFSAYAGAIMLYVIVGWYGGRMQVSFYGAEYNAVAFANLTLF
FGFASLLTLGWRLTPWPGLEALLKVGAACAAVYAAHVSETRSSWMLLPVFGLVFLMSRRVWSLRRKLAVGLVLVAALAVL
AGVMLSSQGNRMHKILTDLQRYTVQNDRNTSVGIRLQLWHASWMIFQEAPVLGVGPRNFRAELAKLRDQGVVTPEVASGY
GEPHNDFMAAMAGYGLLGLLSILLLYLAPAWVFLRRMASDDRVIRTGAQIGLLFCLGYCAFSLTEMMFRNMRSVPIYSAT
LVLLLALTAPRAA
>AHV91169.1 cell division ZapA family protein [Bordetella holmesii ATCC 51541]
MERLDVSILGRDYSLACSAEEKPVLLAAVRHVDHLMLRIQGTGKISSNERIAVMAALQIAGELLAMKAPTARLEVWQLAT
SSVESKK
>AHV91170.1 'Cold-shock' DNA-binding domain protein [Bordetella holmesii ATCC 51541]
METGVVKWFNAEKGYGFITPESGGKDLFAHFSEIQSNGFKTLEENQRVSYVTAMGPKGPQATKIQII
>AHV91171.1 plasmid replication region family protein [Bordetella holmesii ATCC 51541]
MGIGIQQQDVWAAADALLRAGEQPTIERVRLHLGRGSPNTVGPHLKTWLRDLGGRLDKGEPPDAIVAAAQQLWQMALSQA
HADANAQAAEQHAALRAEQAAIETQREALEADAQRLLQREADLEAALVAAQALGQAAQARAQALQQRLDSAEAELQALRQ
ALEGAHQQLQQAERQGRDSLAAAHKLHQETLEQAEARHASHERRWLLDIDAQRQAVRRLQEEREASARTLAAREQSHTQA
LQAMEQQARAEGERLAAALAAASEALAGQAHWQAVAEAGERALALREAALSQRQSDLEAHAAQLLAQLAIKDEQIAGLLA
AARSKARGPRKT
>AHV91172.1 hypothetical protein D560_2417 [Bordetella holmesii ATCC 51541]
MFFGLRWRPGALEKLIMKVIINTMLGLRFILKHRVLYLE
>AHV91173.1 P-loop ATPase family protein [Bordetella holmesii ATCC 51541]
MLEDAGFTCVDNLPLRFLTEFVAASRDDGMERVAVAIDVRSPGELAELPNAITALRAMGTDLSVVFLDSNTDTLAQRYSE
SRRRHPLTDRVSRGGKAASLTDCIAMERELLAPLRDQEHVIDTSDLTPGQLRAWIRDLIKADRAPLVLTFESFAYKRGVP
SDADLVFDVRCLPNPYYDRNLRPLTGRDQPVADWLSGFDIVQRMIDDIDAFIRRWLPQYTLDTRNYLTVAIGCTGGQHRS
VYVVEELARRFSDHDPLLVRHRTQLPEESA
>AHV91174.1 hypothetical protein D560_2402 [Bordetella holmesii ATCC 51541]
MLQDALLAWLHYLAIFLVVVLITAESVLLRPSLTREALGRLLTYDRFYLLAALLALITGVLRFAFGAKGGLFYMINPWFH
AKLTVFIIIGLCSLKPTLTYLRWRNSAAKDADFLPDAQAIGTTRRWVMIEAHLLILMALFATLMARGIGI
>AHV91175.1 succinate-semialdehyde dehydrogenase [Bordetella holmesii ATCC 51541]
MKLQNDQLLRQKAYIGGQWCDADSNATITVRNPHDGSSLGTVPNLGSAETARAIEAADRALPAWRAKTGKERGAILRKWQ
QLIEANADDLALLLTLEQGKPLAEARGELNYALSFVEWFAEEAKRVYGDVLPTPRGDQRMMAIRQPVGVVAAIIAWDFPS
ALVTRKVSPALAAGCTVVLKPSELTPFTALALAWLGEQAGIPPGVLNVVIGDPAPIGAELSGNGKVRKLTFTGSTQTGRL
LMQQSAANIKKLSLELGGNAPFIVFEDADLDEAVQGLMASKFRNAGQTCVCANRVYVHTSVAQSFTDKLQAEISQLKLGG
SLETGVTLGPLIDQRAVDKVRGLVEDARAKGARILTGGKLQAEGSLLYEATLLTGVTDAMDIAHQEIFGPVVGISTFEDE
AAVLARANDSESGLAAYFYTANLERVWRVMEGLEYGIVGVNTGAGSNEVGPFGGIKESGVGREGSKYGIEEFLEIKYVCL
AGKTFNAAR
>AHV91176.1 exonuclease, RdgC family protein [Bordetella holmesii ATCC 51541]
MWFKNLKIYRLSAPWMLTGEQLEESLARHAYQSGNNLEMQSLGWISPRENASLAHSLNGQILLSLRAEKKLLPTTVVNQV
ARARAQEIEEQQGYKPGRKQMKEIKERVTDELLPRAFSVYRDTRVWIDTTNHWLVIDAAASAKADEVIGMLVKTVDPLPL
ENLYVAQSPAAAMTGWLAADEAPANFSIDQDTELRASGESRAAIRYVKHSIDADDVRRHIQSGKQCTRLAMTWADRVSFV
LTESMDIKWVAPLDVLKENPENAAFNEDEKFDSDMTLMTGELAKMLAELVEALGGEKRD
>AHV91177.1 hypothetical protein D560_3210 [Bordetella holmesii ATCC 51541]
MSSELNPNLRYLATGSLLALIVLCLAWETWLAPVRPGGSWLLLKALPLAFPLRGVMRGNVYTYQWASMLSLLYLMEGVVR
AMSDPAPLSAGLGMLEAALAATFFLAAIFYVRPAKRAARRERT
>AHV91178.1 peptidase M48 family protein [Bordetella holmesii ATCC 51541]
MKRVFLFLITNLAVMLVLSATLRILGLDRFITAEGLNVNALLVFSVVVGFTGSIISLLISKPMAKYSTGAQVIDPNAPRN
QREAWLLDTVYQLADRAGIGRPEVAVYEGAPNAFATGAFKNDALVAVSTGLLDSMSEEEVAAVLGHEVAHIANGDMVTLT
LIQGVVNTFVVFLARVVGYFVDRTVFRTERGVGPGFYITVIVCEIAFGVLATIIVAWFSRQREYRADAGSAQLLGAREPM
IHALARLGGEQPGELPKSFQASGIAGGRAISALFSSHPPIPSRIAALQQMRVS
>AHV91179.1 phospholipase D family protein [Bordetella holmesii ATCC 51541]
MEHIDELLSQYWPHLVFAISVIAGTVAAIHVAMTKQDVRAAIAWVGVAMFSPIFGALLYFVAGVNRTHRSLVSQQRDEAA
VANVDLLRSATLGDVVPYSAAQFSSLRTLGDQLSYFQLLGGNRVRPLNGGDETYPAMLAAIRQAQHCIAMQSYIFDNDPI
GREIADALIEAQARGVQVRVLIDAVGSRYSHPPIVGRLIKGGVPTARFMTNPLGVLRMPYANLRSHRKILVVDGCHGLTG
GMNIRAAFVSALSGAQTNHDTHFELHGPVVGQLMSVFAHDWNFTTHETLAGEPWFSARLTESAGTVPVRCVASGPDRALG
NNHNMLLGALAVAQHHVRIQSPYFLPDQTLIGALATAARRGVVVDVVIPDKNNLRLVDYAMQAQLDQIVRTGCRVWRAGG
AFDHSKLMTVDGVWSYVGSSNLDPRSLRLNFELDTEVYDASLAQWVSARIDARIAAGQRVTLESLLARPFATRLRNKVIW
LATPYL
>AHV91180.1 transglycosylase family protein [Bordetella holmesii ATCC 51541]
MVALFVLDLLLPLPPVGAAGARVVVASDGTPLHNYPSEDGVWRYPVAPDDVSPRYVQTLLAYEDRWFYWHPGINPWAMLR
PGGSGPAMDALFQAGPP
>AHV91181.1 SMP-30/Gluconolaconase/LRE-like region family protein [Bordetella holmesii ATCC 51541]
MEEDDSLLWSDIPNNRMLRWSSLDGMTVWRSNVEFTNGHTRDRNGDLLHCSHGRRAIVRTPLSTAGVLADTADQIVVDRY
MGRRLNSPNDVVVDAVGRIWFSDPDLLPVISTKSM
>AHV91182.1 delta-aminolevulinic acid dehydratase family protein [Bordetella holmesii ATCC 51541]
MKPQLIAPAFPVSRPRRLRRDDFTRRLVRENTLTVDDLIYPVFVAEGQGLAQPVASLPGVVRYSPDTVLAVAERCMQLGI
PVLALFPVIDPALKTPDGIEATNPDGLIPRVVAALKARFPDLGILTDVALDPYTSHGQDGIIDADGYVLNDPTIEILVRQ
ALTQAQAGVDIVAPSDMMDGRIGAVRQALDGAGHIHTRIMAYSAKYASAFYGPFRDAVGSAGTLGKSNKMAYQMDPANID
EALREVAGDLAEGADMVMVKPGMPYLDVLRRVKDAFRVPAFAYQVSGEYAMIKAAAANGWLDHDKVMMEALLAFKRAGAD
GILTYFAIDAAEKLRHAR
>AHV91183.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MPFLWERTLHRFRTNHGEQVKGIATTFAREGANVVVADINEAGGKRVAEAINNAGGRAVFVRADVSRSDDVAALLAATIK
AFGGLDTVVNNAGTTHRNRPMLEVEEEEFDRIYAINVKSIFLTAKHMVPHFRAHGGGSFINIASTAAIRPRPGLTWYNGS
KGAVVTTSKSMAAELGPDNIRVNCVNPVIGATGLLADFMGVPDTPENRKRFLGTIPLGRFSTPQDIANACLYLASDEAAF
ITGTCLEVDGGRCV
>AHV91184.1 N-formylglutamate amidohydrolase [Bordetella holmesii ATCC 51541]
MPIIHPLSYRLDLPQSFPQAAPLVLDSPHSGTSYPPDFAASVDFGALRTAEDTWVDDLWGDAIDLGVPLIAASFPRAYID
ANRSAEEVDPLLLDTPWDGPMTDSPKVKLGKGLIWRMLDDGTPLYDRKLSIDEVRHRINACWKPYHAKLAEVLDQTHAHF
GKVWHINCHSMPSVAGAFATDRPGLVHPDFVLGDRDGSTSDPAFREFIAKWLRQRGYNVTVNDPYKGVELVRAFGNPAQG
RHSLQIEINRKLYMDEVSLRPTDGYPRLKSDLRELTAALIDWTRAQTA
>AHV91185.1 HIT domain protein [Bordetella holmesii ATCC 51541]
MSENCIFCKIAQGTIPASKVYEDDEFVVFRDINPAAPVHLLLIPRRHITSMQDVTAEDAGWLGRMMTLVPRLAQENGCNP
GPEGGFRLLANAGAEGGQEVPHLHFHIIGGSRPWNGRAAPEA
>AHV91186.1 methyl-accepting chemotaxis (MCP) signaling domain protein [Bordetella holmesii ATCC 51541]
MRPSEEQIDAAEAYYEQLRQGRGRGWRIKAGQVVPRGWRSVVARMVFPLRRGARAQMLRAALLSSLLFGGLAAWMLHMHW
ASLDSVQAGLGVAGALAAVALLCTVQWRLARAVLRPLREAADMARQVAAGNLTSQVFADTKDEVGNLAFSLDVMRKSLIG
IAGDVYQGIAGTTHAAQGIAQGNQQLALRTSDQSTSLQSTASSMQQLTTTVKQNADHARQANDLAASSMDVARRGGDAVD
QVVHTMHGISDSSRRIADIVNIIEGIAFQTNILALNAAIEAARAGESGKGFAVVAGEVRSLAQKSAQAAREIKDLIGESV
HRVAEGSAQAEQAGDTMHEIVDAVRRVTDIIGEISVASQQQASGIEQMEHAVAEMDGMTDKNSVLVEQLGAAVVQLSGQS
AALRETIQVFRLTRETAGRRLAFEGATAG
>AHV91187.1 poly(A) polymerase family protein [Bordetella holmesii ATCC 51541]
MITDTIRKFVGRLFGPVNRGPQRIASDKHGIDRRNVSRHAIKVCEVLRQHGYEAYIVGGAVRDLITGLEPKDFDVATNAT
PEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASADQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHT
EEVIDYHNGVQDLKKRQIRMIGDPVKRYREDPVRMLRAVRFAAKLNGTIDPATRQPISTMAELIENVPASRLFDEMLKLL
TCGHAMDCLRQLRADGLHHGLLPLLDVVLEQPGGEHFVELALERTDARVRAGKTISPSFLFAALLWQQVESRWKELRGRG
EHNIPSLLQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRGGKTIYRMIEQPRFRAACDFLQLRAAAGEFDSVQA
QWWMDLANADDATRAEMIEASAHLPSEASSDESSPSRRRRRPRRRSTRNSAE
>AHV91188.1 type III pantothenate kinase family protein [Bordetella holmesii ATCC 51541]
MILLIDSGNSRLKLGWLHLDSGAREPEPVAFDNLDLQALGAWLQTLRHKPVRAIGVNVAGAQRGAAIAAAMKGCAIEWKR
PQRDVLGMTNAYRHQDQLGADRWAAMLGLHMRLPAGHPPALLASFGTATTLDTLGPDNEFAGGLILPGPAMMRGSLVHGT
ANLPLAEGPVTPYPTETHEAIATGIAAAQAGALVRQWLAGHARYGKAPEVYVAGGGWTEVQPEIERLLRLVGASLGAVST
PTFLKAPVLDGLAALAAATAAH
>AHV91189.1 cupin domain protein [Bordetella holmesii ATCC 51541]
MSDSSSRLVRFGTGPLIQAEIGKPRRPIEGNTEFRTVNAFEANEGRVLSGIWESTAGKFRSDTTGYIEFGYILEGQARLV
DPDGTVHELRPGDPFIMPQGYKGHWEVDTFVKKVYFITHVA
>AHV91190.1 pyridoxamine 5'-phosphate oxidase, FMN-binding family protein [Bordetella holmesii ATCC 51541]
MTPDPRYLITDSLELAARYGEPAAPSLSKEADHVHPHYRAFIEAAPFAILATAGAGGLDASPRGDPAGFVTIEDDRTLLL
PDRRGNNRIDSLRNVLEDPRVALLFLIPGIGETLRVNGQAQISVDPRLLERLSMDGKAPRSVLIVHVEKVYFQCARAIVR
SGLWDPATQVSRDALPSTGRILADLSAGTIDGRVYDRDLPQRLRATLY
>AHV91191.1 sodium/hydrogen exchanger family protein [Bordetella holmesii ATCC 51541]
MLGTAQLFDYAGLSAGLGGFLVGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVNVEEALDYWPYVLAGVVALLSL
KALVLYGIARLMGLPHYHRLLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGEVPIVIRLLERLPGRYG
GIGDMAVTPVGFAGSPPPQSAADNEERSGPG
>AHV91192.1 zinc-binding alcohol dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MKAIAFTRNLPASDEQALQDIDLPVPDAGPRDLRVRVHAISVNPVDVKIRHNRKPQDGQPEVIGWDAAGVVEAVGPQVSL
FKPGDRVWYAGALNRPGANSELHVVDERLVGHMPGSLDFAQAAAMPLTAITAWELLFDRLRVLDNQRPSQDAILVVGAAG
GVGSILVQLARQLTGLTIIATASRPETRAWVTELGAHHVIDHSRPLAAQLAATGHDQVRYIAALTQTDQHFPELVKAIAP
QGAMAVIDDPSAIDVRQLKSKSASLHWEFMFARSMFQTPDMAAQHELLEQVAALIDTARLRTTLGEHYGHINAANLRRAH
AFIESGRARGKIVLEGFAA
>AHV91193.1 PAP2 superfamily protein [Bordetella holmesii ATCC 51541]
MALIMAVVFVALAATVSLEGNLVAFDVALARALSMSLSTEFLWLLSWFTHLGDRTWLTVLAIVMILGLLMWQHWVLAAGA
AAATAGGGILNWLLKHFFERARPDFSHGFSHATGFSFPSGHASASLAVYGFGCYLLLRLLPARWQGLCVAMTAALIVAIG
LSRVLLQVHFLSDVVAGLAVSALWLALCVTLTERLQRRR
>AHV91194.1 flp pilus assembly protein CpaB [Bordetella holmesii ATCC 51541]
MQAHIESKERDLQRRNQVPTVARVVAWADLPAGHVLQVEDLAQRDIPTAWASVQSLGPDDLEDVIGSRLRIAVPAGQPIL
RADLEDEQPATSARLAAGKRALTLPLRELAEAPPDMREGDHLDIYVSLTHDDKRLTLPLLQNSRVLAAPGLQGGQVVLEV
SSADAVRIIAARQVGALTLALRAPEDMTAPALPAGELSDILGLQRQANGAIPVLYGDGHQNLPILMPEGP
>AHV91195.1 hypothetical protein D560_3440 [Bordetella holmesii ATCC 51541]
MNRRDFLSLAASVPLTLHASRLLAAPATDQRLLVVFMRGAYDAASLLIPQNDFYDESRPTIAIARAGSGADAALPLHDGW
GLHPALADTLLPYYQRGELAFVPFAGSDDLTRSHFETQNRIERGAAAHDGKARVDSGFLNRLAQQLGMPAVAFTQDVPQI
FRGQASVPNISLAGTARKGRINDAQGRVITQMYQGTELEARVTEGMDLKSAAQRMDAEQAEANGTSLTVSRLQAESQRIA
GFMRERYNLGFVDVGGWDTHVNQGDARGSLAGKLKQLGQALSAYAQAMGPAWKKTTIVVISEFGRTFRENGTRGTDHGHG
TVYWVMGGQVRGARIAGEQVAVAPGKLFQDRDYPVLNEYRALFGGLFSRLYGLDAKRLAAIFPGVRPIDLKLV
>AHV91196.1 cation transporting ATPase, family protein [Bordetella holmesii ATCC 51541]
MLKYLKMTASSNFGNVFSVLVASAFLPFLPMLPIQLLLQNLLHDFSQTSIPFDRVDPEQLQTPQRWDPAGLGRFMLFFGP
ISSIFDILTFVLMWYVFGANSPEHQSLFQSGWFVEGLLSQALVVHLIRTRNIPFVQSRAAPALLIMTALVMLAGLLLPFS
PLAVYFDMQPLSWSYFPFLLVILLGYAWLTQLLKNAWVRRYGWQ
>AHV91197.1 NADH-quinone oxidoreductase, E subunit [Bordetella holmesii ATCC 51541]
MLLSAQAYQKIDRELAKFPADQRQSAIMASLAIAQEEKGWLPAEIIEDVANYIGVPPIAVQEVATFYNMFDVKPVGTHKI
SVCTNLPCVLRDGEKAADYLKRKLGVNFRETTADGKFTLVEGECMGACGDSPVLIVNNKHMCVRMSEQKLDALIDGLKSQ
GESA
>AHV91198.1 excinuclease ABC subunit B [Bordetella holmesii ATCC 51541]
MEFPGSPFQLYQPYPPAGDQPAAIDGLAQGIADGLMYQTLLGVTGSGKTYTMANVIARLGRPALVLAPNKTLAAQLYAEM
REFFPRNAVEYFVSYYDYYQPEVYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAM
VLILRTGDTISRREVLARLVAMQYTRNDADFTRGTFRVRGETIDIFPAESPELALRLTLFDDEVETLELFDPLTGKVRQK
LPRFTVYPGSHYVTPRETVLRAIETIKEELRDRLAAFVRDGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAA
PGDPPPTLIDYLPADALMFIDESHVTMGQLGGMYRGDRARKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPA
EYERQHADNVVEQVVRPTGLVDPEVEIRPAHTQVDDLLGEIRKRVLSQERVLVTTLTKRMAEDLTDFLTEHGERVRYLHS
DIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLHGHAILYADRLT
ESMRRAIDETSRRRAKQLQHNEDHGITARGVSKAVREMIDGVMAPADSHDPLEAMVPAAALSDEKSMAREIKRLEKLMMD
HARNLEFEQAAAARDALTALKNRLLLDGKQ
>AHV91199.1 hypothetical protein D560_2631 [Bordetella holmesii ATCC 51541]
MEGISPTLINLIIFVLAIYVGYHVVWNVTPALHTPLMAVTNAISAIIIVGAMLAAALTEGGLARTMGVLAVALAAVNVFG
GFLVTRRMLEMFRKKERPAKEHSQ
>AHV91200.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MRGYTQQDLARACGLSQSAIGSYETSQRLSSRSVRRLAMALNVSLDWLEMGRGPMDPGTSLAEPAPEPADHVAAWPFRTV
TPAHIASLSKRDQRLLENTVRSFIEACQADPGNPPRPAKPKKPR
>AHV91201.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKTIIKGLLISACLTVSAHAAYPEGPVKLIVPFPPGQTTDIIARAFAEELQKELQQPIIVENRAGAGGIIGTEAAKRAPN
DGYTVLFTSGGPASINESLYKAIPYRTLSDFDQVAVLYEMAQVLITRADMPASRVDELVAYLKKTGDQLCLRRHRADQSP
DHGDVQA
>AHV91202.1 hypothetical protein D560_0738 [Bordetella holmesii ATCC 51541]
MKSLSLAAAGDSNKVKERVSTGSDLSDIPGIDLQVQDFSLYDKPLGSLQLRGTNTARGRLWQLEKLQIQNTDATLHATGS
WKLDSAERGLTVQARVDFKDVGKFLDRIGVKEVMAAGVGSVEADFTWGNLPWTHNLINIRGQGKVSIDKGRFLSVNSRTA
RLLELLSLQSLQRLAKLEFNPSSLVRDGFPFDTLRGDMALNGGVLKTEGYRVTGPVADIALSGNTNIISERWDLKAVVVP
NLDASGAAVATALVNPLVGLGAFVTQWLLKKPLERAMTQDYKVTGSWEDPKVEPVTSSAPVRRQGLPNFDTGH
>AHV91203.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bordetella holmesii ATCC 51541]
MQDLPNPCEDTPPPAAGSLPRRATRAVQVKWGERVVTVGGGNPVVVQSMTNTDTADPIATAIQVKELVQAGSEIVRITVN
TPEAAREVIAIREQLDRMNVSVPLVGDFHYNGHKLLTQFPDCAQALSKYRINPGNMGGGKRRDDNFAQMIDVACRHDKPV
RIGVNWGSLDHELMARKMDENSRRARPWEAQAVMRDALVISAITNAQRAQELGLRGDAIILSCKVSHVQDLIAVYRDLSS
RCDYPLHLGLTEAGMGSKGIVASTAALAVLLQEGIGDTIRISLTPEPGGDRGRESIVAQEILQTMGLRAFTPMVVACPGC
GRTSSTFFQELADSIQTFLRRQMPIWRSRYPGVESMNVAVMGCVVNGPGESRHADIGISLPGTGEVPAAPVFIDGERTVT
LKGDHIAEEFQAIVEDYVARRYGAAVSH
>AHV91204.1 sigma-54 interaction domain protein [Bordetella holmesii ATCC 51541]
MPTSASSSSAPAQSARFEGTDRYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVARALDRPLLQWHIKSTTKAH
QGLYEYDAVSRLRDSQLGDEKVRDIRNYIVQGTLWQAFEAPEPVVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRQTV
QARHRPLVIITSNNEKDLPDAFLRRCFFHYIRFPDRDTMRDIVGVHYPDIRQDVLRAALDTFFALREAPGLKKKPSTSEL
LDWLRLLLAEAIPAAEIDAHAATAVPVLAGALLKNEQDVHLLERLGAMARGAQRR
>AHV91205.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91206.1 protoheme IX farnesyltransferase [Bordetella holmesii ATCC 51541]
MTSIAASQPGLLRQYFVLTKPRVTQLAVFCAVIGMFLAVPGLPDLKRVLFGTIGIWLLAAAAFAINCLIEQEIDARMART
ARRATARGTISHTQVLSLSGLLGGAGMLVLYHLVNPLTMWLTFATFVGYAVIYTVILKPRTPQNIVIGGLSGAMPPALGW
ATVANAVPAQAWVLVLIIFIWTPPHFWALALYRTQDYVKAGLPMLPVTHGSKYTRLQIMLYSFTLFAVTLLPYAMRMSGV
LYLLAAVCLGAIFVAHAVGLYRHYSDERSRRLFRYSILYLALLFGALLVDHWVSALLV
>AHV91207.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MTRKTSLVGRWNYLDKRNINLFADIKHELDNGWKLTLAGNWLSAKSDFLGNYTQRTTGDLFTLNPRLFQYDDTQWGLDAY
ASGPFQLLGRQHELVIGASTRKDDFSYHGGRDVSYRYLVDMNNLGAFDPPAPTGLDADMWHYNITQKQQGIYTAGRFSLA
QGTTLVVGARMSWFDFDRYAQTTVRTESRYKQSGKITPYAGVVQDLNEDISAYASYTEIFKPQENIGVDNEVLKPMTGQN
YEVGLKGEFLEKRINAALAVFQTDQKGRADLIENSNLCPPGVFYCYRAAEKVRNRGVDFEINGALTPAWHVSFGYTYTQS
KYAQGPQSGQAFATTYPRHLLKVSTDYRLPQRWNQLRIGGSVYAQSGIYNVSGANEDEYRISQSPYALIGLHAIYEVNKN
LTVQFNVDNLFDREYYQSVGNPNYWSFQGQPRTFRLALRATF
>AHV91208.1 putative pterin-4-alpha-carbinolamine dehydratase [Bordetella holmesii ATCC 51541]
MTQRYLRMDLSIARAALPSWQAHPNRQALQKRFRFDHFNAAFGFMSRVAMFAEKIDHHPEWTNVYNRVDVILTTHDAGGV
TELDVRMAQFMDEAAAQAGATGLAIPA
>AHV91209.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MIELRSLSKRYGQSVVVDDVNLVLLDAGITAIVGPNGAGKSTLLSMVSRLLPVSGGQVLIDGLDVARSDSRELARRLAIL
RQDNHLPLQLTVRDLVAFGRYPHTGGRLTIEDRKHIDRAISYLDLEPLAGRFLDEMSGGQRQRAFVAMVLCQDTRYVLLD
ESLNNLDMKHAVAMMRILRRAADELGKTVVIVLHDLNFASAYADHIVAMCQGNVAYQGNPEQIIRSEILSQLYALPIAVH
ELDGQRICVYYR
>AHV91210.1 hypothetical protein D560_2115 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSGHWPGTRARQKNKTPRTA
>AHV91211.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MLAVSLALASGLSVHAAWGQAAAAHYDVPAGPLAEALTRYARAAAAVLSFDPAHLRGLSTAGLKGEYGVAEGFARLLAGS
GLQARQGSDGVWSIQPAAGAQTLAPIAVTGLGGSTTQTFGYVAKASQSATKTDTPLIETPQSISVITRDQMTEQGAQSLN
QVLRYTAGVATETRGATATRLDQFTVRGFSASTYLDGMRVFGGRDALPQVDAYRLERVDVLKGPSSVMYGQGGPGGVVNQ
VSKRPMDERYNEVEVQAGNYHLRRLNMDFSGPIDDDATLLYRLNGSAYDTNGQISHTKEQRYFIAPAFTWRPNADTSLTV
LTHFQHDPDMGSYGAAPPMRTVMSAPDGRKLSARYYDGDADFEKSDRKSYSLGYIFEHRFNDTFKASQSLRFQHSEGVYR
SVYGASSRYFGYTGPDYLYQQRASIATDVDVDAFTIDNNLQANLHTGPLSHTILLGFDYQHIHTDTLAGYGSAPPQNVFN
PNYHMNIAVPAFSSDQTQRQLQTGLYAQDQIKWDRLSLLLGGRYDWARTHTGTDNLATSRHSSSSLAAEAFTGRAGLIYN
FDNGLAPYASYSESFEPQSGTGWNNQAFKPIEGKQYEVGLKYQPVGSNALVTVAAFDIRRDNMLTTDPDPAHMCGSGRCQ
IQAGQVRTKGFELEAKAEVLRGLSVTAAYTYLDNKYEKANADTAGLNLKGHRPAGVPAHQASVWTRYQLQDGPLAGLGLG
AGVRYLGSSWGNDNNTYKVPSTTLVDLMLDYDLGRMTASLKGMQVALNVSNLFNKEYIATCSGDAWCWFGYQRSIKASLR
YRW
>AHV91212.1 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Bordetella holmesii ATCC 51541]
MGQGRDAQALQAGADVPAQWWQLFGSPVLDTLVRQALADSPTLAQARAKLVQAQETANAQAGSRLLPAVDAKLSGVRQRV
DPSSMGIDVPQPEPFALYNASIAVSYTLDIWGGERRAVEGYVAEAQRMAYEWQAARMTLAANVVTTAIRQAGLREELEAA
TALAEAQQSQLTIVRKRLDAGAVAERQWHAQAALVAQTQAQLPTLRQELARSTHQPAVYLGRDPGSMSDPGLRLSSLKLP
QQVPVSLPSALARQRPDILAAEAAWRRAAADVGVATANLYPRLTLTAGFGTQRTHAGDLGNGINIWNLGLGLAQPLFRGG
ELRARKRGAEAAYEAAAAAYRNTVLQGWQQVADSLRALEHDAEVLGQQRQAEAQTEAVYTTASDQYHVGGISQLNLLDAQ
RQLLSARRDRIQAQTRRYTDTAALMHALGGGWWNEAPAEAGV
>AHV91213.1 phospholipase D family protein [Bordetella holmesii ATCC 51541]
MQGGRFLRVVPRQGDTVVRIVANDPDSEDGYAVYLTLMSAFESAQRSIHVTMAYFVPDPAFVQSLAQAAERGVDVVLVLP
GFSDSAVVWHAGRSHYAALLKAGVKIYERRDRLLHAKTMVVDGVWSTVGSSNMDWRSFGLNYEINAVVLGPTFGSEMEAL
FALDRQASVEVTSEQWLKRSLDERFMETFSRLFERWL
>AHV91214.1 putative polyketide synthase domain protein [Bordetella holmesii ATCC 51541]
MRAQASGGLTLSAALIERRLRRAPQTVALFEHVLQRCVAAGVAQPAPTGWTLPPDEEGQPTAADIWNSLLREYPDYFPAI
YAAGRVGQHLTALLQGKAEVDDIIPLAVTPTAVSRLLLGAETGQQLAAVLEIAQGAPLIGPACCASMDFGVADYSYACPD
SQAIDDARHALMDSFPDASAILLNDETLASPAARYDLIIVHCEFDTLHACQQALNYARASLKPDGKLLLRGTHPSPWLDF
VFGGRPQWWQGADNVTALPPASRWQQWLHDQGLACEPVIELTASPYTGAYLLLASLPAAQPLVPAADIRRQLILASAAGP
DQALAQALHTELQAQGQLSQLASGNTADQLDALIQDTQNRHGPLHDILLLDGWGADSADDAARLHAQVQRCALAAALTQA
CERTATAATIWIVTRNAGVSMGGGTPQDPAIGDAALWGYGRTLANEASNYRIRLADLPQGTAAIAALAREVRYPDAEDEV
LFGALGERFAPRLRVVPPPRPLSPSPATPNASRLGFSFPGQLRNLRWESYTAAAPRMIRSRSRSTPPG
>AHV91215.1 luciferase-like monooxygenase family protein [Bordetella holmesii ATCC 51541]
MTTSEYLWYIPNHTEAGHRGDTAADDHNSLDTLTRQALALETHGWTGALLGAGWGRPDTFTVATALAARTTRFEPLIAVR
PGYWRAVQFAAAAATLDHLSGGRVRVNIVSGKDDLQAYGDHEGGQDERYARTREFMQLTRRLWTEEAVTYDGDFFQARQA
RLQPQVVTRGARRHPKLYFGGASAAAERVAAAEADVQLFWGEPLADLAERIHRLKTLSARLGRVHAPLEFGLRITTVVRE
TTEQAWADAQARVAAMANAQNGAWQDHRRAVAVGQPRLFDLQQRGEVLDDILYTAPGRHGGGGAATTWLVGSARDVAAAL
RKYQDLGITQFVLSDTPYLNEIGRQGRDLLPLLRAG
>AHV91216.1 etoposide-induced 2.4 family protein [Bordetella holmesii ATCC 51541]
MARAFKRAFVSQLHPNMLFAVLLPFLIALLGSILLLWLFWTPLTDWLRLEASQWDLVNRLDEWLVAIGLFSLKLYLVPLV
AAAILLPVSGILGLAIAAVFVMPLVLRHVTEREYAGLARQGRNATVVSVWNAIWVSVLFALGWLLTLPLWLVPPMALLLS
VFWWAFAFTRMLRLDAIVEHATAEERRWLLARNNTGFWIIGLICALLNLLPPAWIILPVYSSLVYAHYGLHALQRRRAEQ
SQQLVN
>AHV91217.1 putative antibiotic resistance [Bordetella holmesii ATCC 51541]
MHLIDCTEAEHAAAILDILNDAIVNSTALYDYVPRPPAAMAAWFAAKRAGGFPVLGAVDAQGHLLAFASWGAFRAFPANK
YTVEHSVYVQREQRGRGLGAMLLRALMARAQQAQLHVMVGCIDASNAGSIALHEKLGFTHSGTLRQVGFKFGRWLDAAFY
QVLLPTPVEPRDG
>AHV91218.1 dehydratase family protein [Bordetella holmesii ATCC 51541]
MVRISDARMSGTSYGACVLHVAPESYVGGPLALIRTGDLVSLNVPARRIDMLVPEAELAARKQAWQAPAPKFDRGFGVLY
LKHVGQADSGCDFDFLQTRKAEHKEEPEIH
>AHV91219.1 ribonuclease, Rne/Rng family domain protein [Bordetella holmesii ATCC 51541]
MTENILINVTPFETRVAIVAQGAVQELHVERSVQRGHVGNIYLGRVVRVLPGMQSAFIDIGLERAAFIHIADLRENRQER
SQGVNPTPIEKLLFEGQTLMVQVIKDPLGTKGARLSTQISIAGRMLVYLPHDPHIGISQKIDSEAERTQLRERVHALVPE
GEKGGFIVRTQAEGANDEELAADLEYLRKLWASVQAAARSQPAPTMLHQDLTLAQRVLRDMAGPSTGVIQVDSRSTTAAL
LEWGKTYTPSVLSRIRHYSGERPLFDTASVDEEIARALSRRVDLKSGGYLIVDQTEALTTVDVNTGGFVGGRNFDDTIFK
TNLEAAQAIARQLRLRNLGGIVILDFIDMEDSEHRDTVLAELKKALSRDRTRMTVNGFTQLGLVEMTRKRTRDSLAHQLC
EPCPMCQARGNVRTPRTVCYEILREILREARQFNPKEFRVLASQGVVDLFLEEESQHLAMLGDFVGKPISLEVEGAYSQE
QYDIILI
>AHV91220.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MSAMLEVRGLEVNYGHIEAVRGINLSLHAGDITALVGANGAGKSTTLLALSGLLPKAAGQILFEGEDITHLAPHQLVARG
IVQVPEGRAILTTMTVLENLELGAYRRGLKNLDSDLEYVFNLFPRLKERIQGMAGNLSGGEQQMLAIGRALMAKPRLLLL
DEPSMGLAPIVVQDIFRSLRAINADGLTLFLVEQNVRQALKIAQKGYVLENGAMALEGSGRELLGHPRVLEAYLGA
>AHV91221.1 hpcH/HpaI aldolase/citrate lyase family protein [Bordetella holmesii ATCC 51541]
MPSLLPVNPVKQRLQNGDVALGMNIRLGRSADIARIAKATGHDFIFLDTQHSIFNLETVHQIAQTALAIGIAPVVRVKSV
NDPDVSLLLDNGVTGIVYPDVNTAADARRAVEICRFAPLGKRSVAGGYPHFDYKALPLSQSISELNDVCLLVCMVETAEG
LANIEEICAVPGMDVIHMGTNDFAANIGKAGQFDDPELVAAQARVIDVARKHGKYAGCGGNRNVERQVKAIKGGAQFVTT
QTDVSFLTSSAQQWTNGVRAALSVQA
>AHV91222.1 peptide chain release factor 2 [Bordetella holmesii ATCC 51541]
MFSNPADPLNCFLDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKMEGEYAFGYMRTETG
VHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHMPSGIVVQCQND
RSQHRNRAEAMQMLKSKLYELEMRKRMAEQQKLEDSKTDVGWGHQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFI
QASLKQGV
>AHV91223.1 H-NS histone family protein [Bordetella holmesii ATCC 51541]
MPRETYAAQQAKIEKEITRLQKRAEALQTRRRKPVIASIVKSMREYNITPEEIVAALGSAKSPRASSPRRKAAADGAKRA
VAPKYHHPVSGDTWSGRGKAPRWLVAEESNGASRDSFLIK
>AHV91224.1 citrate transporter family protein [Bordetella holmesii ATCC 51541]
MTSIAQAAWTAYDTQLVTYCVVALLAIVVLISALRIAPFLAILLGAFGVGLAVGLPLDKLGHSFSQGAGGILSDAGLIIA
LGAMLGALLAESGGADRIVNSLLDKAQGRALPWVMAGVAMIVGLPLFFEVGLVMVVPIIFVMARRSGLPILAVGIPALAG
MTTLHALVPPTPAR
>AHV91225.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MNRFENQIALITGAAQGVGRATAARLAAEGASVVLVDRADDQGEAVARDIRAQGGQASFFHADLETHAGARAMVEYALDL
HGRIDVSVHNVGGTIWMKPFWEYTPDEMQREVNRSLWPTLWSCREVIPVMRKQGRGAIVNVGSNATRGIYRVPYSASKGG
VHAATVCMALELAESGVRVNCVSPGALDNGVRAIPRNTQPPSEQDQAWQREMYTDCLATTPMHRMGSMEEVAAAICFMAA
PEASYITGQIMYVAGGHQD
>AHV91226.1 hypothetical protein D560_0079 [Bordetella holmesii ATCC 51541]
MPDRGHSFAIDGERATVFGRQPGFFALSFDLRGQRPPQVIEAAAGRHFFGHGVYLPGGRLMLATENDYDAGQGVIGIYDV
SGTPRRVGEFSSGGIGPHEVILLPDGKTLCVANGGILTHPDYGKLELNLDTMRPSLAYLDATSGTLLENVELPARWHRLS
IRHLALAADGAVWFGCQHMGPANERPALVGRHRRGQPMECFAGDPERLRGMRNYVGSVAADASGHVMATSSPVGGQVLYW
DALSGRQLGATALADGCGVAPAPGAGFLVSSGLGAMVAAGPHTPSAPLISASRDQSWDNHFRRVPRLG
>AHV91227.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MSNPAVSGVFLLLGSAVRWAGWLNGIACLLLMSFSLGIIGSEVAPGDLSWPLACFLAGMAATGLAFVLFACARILVGGAR
LWLFWPVMLLALVCYGSSIAGFGAGCWLSLGGAVASSDDQYATT
>AHV91228.1 gamma-glutamyltranspeptidase family protein [Bordetella holmesii ATCC 51541]
MHDNFSSTQITRKTVLQSADGIVASQHRKAAQAGAAILAAGGDAVDAAVATSFAAGVVEPWMSGPMGGGAMVIYRADTRR
AQVVHFEMRSPAALDPKTYPLAGDGSLSADLFPWPAVLDDRNCRGATAVAVPGTVAGMAAAHQAYGKLPWRDNLQGAIAL
AEEGPLLDWYATLMIAGSARWLARDPAAAAMFLDDGLWPKSSGWTATAAKHLDFHRAAQTLRQLAEEGAQALYGGDIGRA
LAADVQAQGGSLALADLQNYEAQWLDALAIPYRSGTVYATPQMTSGPNLARCLGRLESLLHPQGRPASAAFESYAQVLLD
EYQWRFQHMGDNEDPRTPGCTTHFSVVDRQGNMCAVTQTLLSAFGSHVVALSAGMLLNNGIMWFDPEPGKPNSLAPNKRC
LMNICPVIGQQADRVFALGASGAAKSCRPSFN
>AHV91229.1 NLPA lipofamily protein [Bordetella holmesii ATCC 51541]
MLALAGSAAAAPPQPLRIGVIASVANEATEIAIRQAAAQGLDIKLVEFSDWVLPNIAVADGSIDANFFQHEPFLQLFNQS
RGTHLKAIDYGYSTTIGLFSKKLKRGDETPQGATIAVPNDPVNTGRALLLLERIGLIGLKPGVGHRATLQDIVANPRGIR
LVQVEGSQSARTFDDVTASVTYTTFAKHAGIDEKDGLAFDNTEPDTIKRYAIRWVTTPEKTQDPRLLRFIDIYQQSP
>AHV91230.1 CYTH domain protein [Bordetella holmesii ATCC 51541]
MSEQELKLHVPARAVEGIKQDIAERQATRLPLRAMYFDTPERELVRARIALRLRQEGDTWVQTVKMPGANAISRIELNHL
RPGPVLDLSVYAGTEVGDALARIHGQLGVCYETDVQRLLCKLHAREGTVEAALDLGVLRAGGLELPICEIEFELLSGRPE
AIFTMARDWQQRHGLILDSRSKSERGDALAQLAAALALAGDEATAQQIVARFWAPRGATSVKLSADMSPVQAMSRVGDEC
LEQIIRNAAMLAEVDTAGIYAAGGPEHVHQLRVGMRRLRSAWSLFEGAIAPAPAALQSGLREYFAALGTSRDQDVLADTI
IPALTQAGMPDIPVEPVARGADAQALCSGIAFQGWLLDLYEWSMNVRAVPGEQGVPEPVITEGMPIEPAIIPLDAAPPKP
TLQPFLTWRLRKWHKQVVSQGRQFADLELEARHELRKRGKRLRYALTFAESLLPGARLRAYRKQLARVQDLLGEINDLAV
AAEHYRAQTLHHPQAWFALGWIAARLEVLATEAQPTFVKLADGKAFWKS
>AHV91231.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MLLMTALASLIGLCVLGSLWRSGMPGIREAMSGHVTTILAMLLMAQQAWAPQWLGILVANMLYALGGGLFVLGVRRFLGQ
GVSWRLMLASVGVFVVGLAFYTYVTPDVGARIVLASLIYTVLLIVLVWSVWVSRRERFAYGHIFMLCLASAGIVGHATRL
VIYALGLDAVPDLLTPTRLNVVFLSLGVVVMPSLTLGLIMMIHDRMLIVREREANTDFLTGVMSRKAWWHAALEMGQHAR
DTGRPMALLVLDIDHFKKVNDSMGHAAGDAVLRHFAVVAGALLRPGDALGRLGGEEFIAAMPDLSVLEAQALAARMLAVL
GTMPCQYGDRQLRYTFSGGVAAWDGVESLTVAMERADRALYRAKAGGRSRVDLAYPEAA
>AHV91232.1 asnC family protein [Bordetella holmesii ATCC 51541]
MNLDKFDLAILKALQDNARANLTDIGQAVGLSSTPCWNRIKRMETAGVIRGYTVDLDPAKLGYTDTVIVHVTLENHSEET
LYEFGRALAEIPEVLEAFLVSGDYDYYIRIAVRDTRDYERLLRERLYRIPGIRHSKSGFVLRSLKEARLPLNLPPAQSS
>AHV91233.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MRAFEASARHQSFSAAAAELNVTPAAVGQLVRTLEDWLGTPLFVRGSSGRARLLPTEAAERALPDIRAGFDRLTLGMERL
QEGASNGVLTVAVSPAFAGKWLLPRIDRFQAVGADTDVRLDTNLKPVDFVAQRVDIGVRYGAGHWPGLTAEKLMDEEVYP
VCSPQLLREHWRLQTPADLAQETLIHDLSMDRHTAFPSWGVGCRKPV
>AHV91234.1 methionine synthase [Bordetella holmesii ATCC 51541]
MPYPLDAYTRGAEFVRLLSERILILDGAMGTMIQRYKLSEADFRGERFAEHHKDLKGDNELLSLLRPDVISEIHRQYLEA
GADVIETNTFGATAIAQGDYDLPELAYELNLVSAQLARQACDAYSTAERPRFVAGALGPQPKTASISPDVNDPGARNVTF
DELRLAYVEQLNGLLDGDIDIVLIETIFDTLNAKAAIFAVEQVFAERGVRLPVMISGTVTDASGRILSGQTVEAFWNSVR
HVRPVTVGLNCALGAALMRPYVAELSKICDTYVCVYPNAGLPNPMAETGFDETPADTSALLEEFAASGLVNMAGGCCGTT
PEHIRAIADKIERLTPRVVPQVAVKTRFSGLEPLNIDEETLFVNVGERTNVTGSKMFARLIREEKYDEALAVARQQVENG
AQIIDINMDEAMLDSVACMHRFLNMIASEPDIARVPIMIGSSKWEVIETGLKCVQSKPVVNSISMKEGEAPFREHARLCR
LYGAAVVVMAFDEQGQADSLQRRKEICGRAYRILVEEEGFPPEDIIFDPNVFAVATGIDEHNHYAVDFIEGTRWIRQNLP
HARISGGISNVSFSFRGNEPMREAIHTVFLYYAIREGLTMGIVNAGQLGVYADLDPVLRDLVEDVILDRAEPVGKKDADD
ERTPTERLVQFAETVRGSGAKKEEDLAWRARPVEDRLSHALVHGITAFIVEDTEEVRQKIADRGGRPIEVIEGPLMDGMN
VVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIEEEKRQIAAAGGDVRAKGKIVIATVKGDVHDIGKNIVSVVLQCNNF
EVVNMGVMVPCAQILAKEENADIIGLSGLITPSLEEMAYVASEMQRDAYFRERKTPLMIGGATTSRVHTAVKIAPHYEGP
VIYVPDASRSVGVATNLMSDQAQTYLDELAQEYEDVRRRHTNRKATSLMPLAEARAARPQIDWAHYTPPRPKFIGRRTFK
SYDLAEIARYIDWGPFFMTWSLFGAFPAILDDKVVGEQARKVFAEGQAMLKRIVEGRWLTANGVVGFYPANRINDEDIEV
YRDESRSEVLFTYRNLRQQGVKREGVSNKCLADYIAPKDSGKLDYIGVFAVTAGLGIEKKEAEFEAALDDYSSIMLKSLA
DRLAEAFAECLHARVRRDLWGYAADEQLDNAALIAEEYVGIRPAPGYPACPEHVVKTDMFRVLQAEEIGMELTDSYAMFP
ASSVSGLYFSHPDSQYFNVGTIGEDQLADYVARSGRSEEDVRRTLAPNLGN
>AHV91235.1 N-terminal TM domain of oligopeptide transport permease C family protein [Bordetella holmesii ATCC 51541]
MSSSSSALARPLTPSRRFISDFFASKLAVLGLVMLIIMIGAAIFAPWIAPQDPFDIGGLDILDSKLPPGSASGDGGMIYW
LGTDGQARDMFSAIVYGMRTSLLVGAVSVAAAFVIGAAVGLVAAYFGGRIDALLMRLVDIQLSFPAILVALILLAILGKG
VDKVIIALVVVQWAYFARAARGAALVERGKEYVEAARCMSLSWTRVLFRHVLPNCMPPLIVIATIDLAHAIALEATLSFL
GVGVPVTEPSLGMLIANGFEYLLSGTYWISFFPGIALALLIIAINLVGDHLRDVLNPRNQT
>AHV91236.1 hypothetical protein D560_2601 [Bordetella holmesii ATCC 51541]
MAQVIFAGQAVGAIVLPLMLFHQIQLMVCAVLAARYARRPE
>AHV91237.1 2Fe-2S iron-sulfur cluster binding domain protein [Bordetella holmesii ATCC 51541]
MNAPASSPALQAMAGLDIIEVQLRAIRLQAQGILAFELTHPGGAELPAAQAGAHIDVHLPGGQVRSYSLAGDPADRSRWI
LGVLREPKSRGGSRAMHESLRVGDIVKVGLPRNAFGLAPEGEHAVLLAGGIGITPLKAMAHALAAQERSFELHYCARTAG
HAAFVDELRALLPEGRLHLHFDDGDSSKGLDIAALLADYEAGRHVYYCGPAGFMAACAQASSHWPGAAVHSEHFKAPEVV
RPEGAGDGSFDVELSRSGVTVTVQPDQTIVRAMELAGLRVPTSCLSGLCGACKVDYLEGEVDHRDFVLSDEEKEHCLTVC
CSRARSARLVLDY
>AHV91238.1 DNA polymerase III, subunit gamma and tau [Bordetella holmesii ATCC 51541]
MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAKSLNCETGITSKPCGVCRACT
EIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRFKVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQ
KIPVTVLSRCLQFNLKQMPPESIVGHLQAVLGQEQIGFEVPALRLIGQAASGSMRDALSLTDQAIAYSAGNLTEDAVRGM
LGTIDQRHLVRLLDALATGDARGVLAVADELATRGLSYAGALADFAVLLSRIAIEQRVSGVTPADDPLGQDIARLAASLH
PDAVQLFYSVAVHSRSELSLAPDEYAGFVMACLRMLALNGEAGPATQREAPRTAPQPALTHDVAAAAPATVAADAAPVET
PAVAAVQAAVPAVTASSVTPADPIAPDAEPAVAAEPRPSSVALAHSAPSAATPVPPWEDNPAQEAAVVTAVAGQNQPQVA
ASPEAAPDLDQEGPPSWVDESIPDDAEGGYAPAQAYTLDPDDDFETLASEPAPAPAAAARAAAAARPARTPRQPRSRLSD
MSPQTWPELAARLPVTGLAAELARQSEWAGVQGDAVMLRVAVRTLAESESRVRLQTVLCEHFGQGLRLEIEVGHTGDGTA
HAVARIERAARQQAAEEAVAVDPFVQALVNDFGGHVVPNSVRAVEPPAA
>AHV91239.1 succinate dehydrogenase, flavoprotein subunit [Bordetella holmesii ATCC 51541]
MVAVKNSLPRRQFDVVVVGAGGAGMRCSLQLSQAGLSVAVLSKVFPTRSHTVAAQGGVSASLGNMSEDNWYWHMYDTVKG
SDWLGDQDAIEFMCREAPNAVYELEHFGMPFDRNPDGTIYQRPFGGHTANFGEKPVQRACAVADRTGHALLHTLYQRNVA
ARTKFFVEWMALDLLRNEEGDVVGVTALEMETGDIYILEAKTTVLATGGAGRIWAASTNAFINTGDGLGMAARAGIPLQD
MEFWQFHPTGVAGAGVLITEGVRGEGGILLNKDGERFMERYAPTLKDLAPRDFVSRSMDQEIKEGRGYGPDGSYVVLKLD
HLGADVINKRLPSIREIAIKFGNVDPIKEPIPVVPTIHYQMGGIPANYHGQVLERVNGENKIVNGLYAIGECAAVSVHGA
NRLGTNSLLDLIVFGRATGNHIVNSHPERQHAHKPVPQEAVDFSLNRVNTLEARTSGEKTQDVANAIRMSMQRHCGVFRT
LDLLNEGVEQIEDLAKVAGSIYFKDKSKVFNTARVEALELANMTEVARATIKSAANRTESRGAHALDDHPTRDDENWLKH
TLWYSEGSRLDYKPVQMKPLTVDSFPPKARTF
>AHV91240.1 hypothetical protein D560_2427 [Bordetella holmesii ATCC 51541]
MNAAAFCLAYARFTALSMAMDRHFEDAFDRTLPAGLRRALRAGGSLALALSLWLCARLHGWSYGSVLWIGMLSISGLLLI
WVMTYRPRAAWTAGIACLAIAPLFAALAGLAR
>AHV91241.1 benzoate transporter family protein [Bordetella holmesii ATCC 51541]
MAVIVSFSGTAVLMVQAGHAGGLSTAQIGSWLGSICLALGVGGAVISLRTGLPVVFAWSTPGAALLVTGLVGVPFDQAVG
AFVLAALLTFVCGVFGWIDPIVRRIPGELAGAMLAGVLLNFGMGIFRHMAGAPALVLLMCAAYLVCKRWLPRFAVMAVLV
LGLAVAASQGLLHLEAVRWEWTTFVWTTPHFTLQAAISLGIPLFVVAMASQNLPGLAILQAAGYRPPASRLVAVTGLAGL
AAAPFGAHSVTLGAIIAAICTGPEAHPDPARRYIAAATYGLSYVLLSVAAGTVAVFFQALPAALIAALTGLALLGAIMGG
MANAMGNAQRREAALITLLATASGVSFWGIGSAFWGLAAGLLAHMVLSLRAKA
>AHV91242.1 ATPase associated with various cellular activities family protein [Bordetella holmesii ATCC 51541]
MAFVEARSARHEFITVEHLLLSLLDNASAVEVLRACAANLDDLHRNLRQFVTENTPVIPSGAEVDTQPTLGFQRVIQRAI
MHVSAGGTGKKPVTGANVLVAIFGEKDSHAVYYLQQQGVTRLDVVNFLSHGISKQPQEEPSAVQKEQQSPGEEGGEARQS
PLDQYATDLNAAALAGRIDPLIGREHEVERVIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRITRGEVPEILQAAQVYS
LDMGALLAGTKYRGDFEQRLKGVLKQIRGNPHAVLFIDESTPSSVPVRHRAVRWTPPICSNRRCRPGSSSALARPPIPSI
AASSRKTTRCRAAFRKSMSPNPASNRPCRFCAA
>AHV91243.1 hypothetical protein D560_3172 [Bordetella holmesii ATCC 51541]
MITRSFDSQRQRQQRENEFETLAPSDDTSAPGRAPMAQA
>AHV91244.1 bacterial regulatory s, tetR family protein [Bordetella holmesii ATCC 51541]
MSGKGFAAVGINEILVAAGVPKGSFYHYFDSKDAYGEALLENYFEEYLAGLEATLTAPGQSVAERLMNYWQEWQEVQSFS
GCQGKCLTVKLGAEVADLSEAMRLSLKRGSTSVIARLAQAIEEGVLEGSVAIDGKPAEVAQTLYQLWVGASVMAKIVRST
QPFESALAATRLALHLPA
>AHV91245.1 bacterial lipid A biosynthesis acyltransferase family protein [Bordetella holmesii ATCC 51541]
MLLAFFRFIALLPLPVLQAFGRSLGKLAYAWPGKYRQRLKANAAQAGYPQAAFARRAAGQIGASMLESPWIWFREKDSLN
RIHLDEANRAVLETTLAEQRGTVFLTPHLGCFEVMARYLAQKVALTVMFRPPRKAILAPLLETARNNSAVRAVPANMQGV
REFVRALRRGEAVGLLPDQAPGQGEGVWAPFFGRMAYTVTLPGKLAGQTRVPIVLCAAQRLPRGQGWQLHFVRVPEPLPD
DPQAQATLLNHSMEALIRRCPDQYLWGYNRYKTPRGAPPAPTAP
>AHV91246.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQS
ALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHHGIGRAVPISRLNLDEYNLLTVHS
>AHV91247.1 hypothetical protein D560_0840 [Bordetella holmesii ATCC 51541]
MSTVVATSAIIGAAAGITAQAGADAGRMSATAAAAASGQGRQYDRAHQGKCKPGRCAASLGLLLHDVLLWKVIQAVCRPM
PFHTQDSCQVFEDYP
>AHV91248.1 TPR repeat family protein [Bordetella holmesii ATCC 51541]
MAKVQARRNFVLDNRLLYGYTHNSKETIQAIRYMRGDLTIPAALWPFISGQTYREGNPRLPHGSIPAEDRHVVEISSIKV
LELDGYQLQLVRFKEALAFCPELRKIFFEHGSAEVRAQRLRQFHATASYARAPEAVQHVLTQTVLRTQTAAEIESDLKQI
ALLLGPSFVLVTHCNAMNAHGELIADRAKMVDRVSRACARAGITLVDPGSLLAAYGQDRGMPEDGRDTTHYTTAFAHLVG
KEICDKLLGVQETAALPEGQTANDWKQSLEAAKEYGQAQAWDLALLYANRAIELKPNVSAAYVLRARAMMALSQTDEVLD
AWGAALAIDANRNAYILRQAAECAFEQGQIDTARGWAQESLQCERNEKTATLLGRIHARLGENEQAERAFRVSAQAAPER
SLRHATRSSTPLEEGASMVSALAATQAVDSTSLQGAREHVLKRARREVRHAGRAGALLPSLGAFYALQILAGEHQTELDD
EINQAYRRLLKSYETSAEYRSSEMAIQLLAELAALNAVDVRYVQRAAKQLQADGHGAVAVACWHRLAEAALPAESETVLL
PATRLVQLGAHADAVSVYRRLANSGVLTPEQTAAMIEKNLRALARSMGRHLIAGNLRMAEQDVGAIRAIDPTYAGLPSLQ
RTLSDAHKREFQDQRQQSKDQNEVIASAKRVIESNPMDREANVELVMQSLRTGNLNEGRRLLERFMENAPA
>AHV91249.1 ABC-2 type transporter family protein [Bordetella holmesii ATCC 51541]
MSAHLLGTQARVIAALIYRETRVRFGGTRLGYLWALIEPIMHVAVLSTIYVVWGRQAPLGNLQMFFITGIMPFFLFSHTS
SRLSRAITSNTQLLRLPAITNMDVIFAKALLQALTWIAVFGILLFLTMLGGDLLLPENLETCALAAFFTFLLGFGVGLIN
SVLNMMFKSWEHLYSAVTRPLYLLSGVFYLVDALPEKARAVLIYNPMVHAIEWFREGYFANFSSLTLDRSYLIEWAISAA
VLGLCLERAMRRRLHTR
>AHV91250.1 hypothetical protein D560_3415 [Bordetella holmesii ATCC 51541]
MKRWALVLLLMMVAGFVTSHLMGGQGVWAWVRAFCEAATVGALADWFAVVALFRRPLGLPIPHTAIIPNSKDRIGENLAV
FVRDHFLDPDSLLERLRVFDPTARLARWLSRPAQTKALAQGARQMALQMVELLDEQAVRRAIRSFVEDTVRRWDAAQTAG
EVLTLLTRDGRHQELLDAALQRLAAYLSQEKVKERASGLLVRFARKEWPRIIATVDLVASVDTMADNLADRLARALMDEL
RDVLAQPDHPVRKDYEHWIADYIERLREDPQVAQQVQMLKEKLLAEPRVQTYVQALWDDIHGALRRDLARDDSALTRHLE
GALGGLAARLRKDDKVRAALNAHIMGAANRLTGRLRAGVTEHIARTVKNWDERHLVDELELNVGRDLQYVRFNGTLVGGL
IGLALHAVVLMLQR
>AHV91251.1 16S rRNA processing protein RimM [Bordetella holmesii ATCC 51541]
MSKHADALPDDLVELGRVVSAYGVKGWVKVQPHSAQADVLRAVARWWLVAPGPAGRPSAAARAFSVQQCRVHGASAVAQI
EGIADRDQAEALKGCSVWVSRSAFPKAADDEYYWVDLIGCAFFSKAEGQARRVGVVEDVLENAAHAILRVACQTEDGQPL
LDLKGRAREMLVPFVRAHVHAVDLQARRIDSDWPLED
>AHV91252.1 rieske domain protein [Bordetella holmesii ATCC 51541]
MPPPSGADARRRGWQRHRQCQHQWLTAAHGGNIVCPLHRWTYNNQGELLGAPQFEATPCMNLQRFRLRDCHGLLFEGPRD
PAADMAPLFARPEFDFGDYVLDHVEVHQCNYNWKTFIEVYLEDYHVGPFHPGLGRFVTCDDLSWEFNDWYSLQKVGVHQA
LAQPGSDVYRKWHDRLLDFRAGQTPDFGAVWATYFPTHMIELYPTSSSCRPSIPRALRKPSMWSSSTIPRRSSPSNANS
>AHV91253.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGLPSRRKAVVYSAG
>AHV91254.1 ribosomal protein L31 [Bordetella holmesii ATCC 51541]
MKEGIHPEYREVVFMDVQTGNKFVTRSTINTRETVELDGKTYPLFKCDVTSESHPFYTGAQTRIVETGRVEKFRARFART
AGTVKAS
>AHV91255.1 DSBA-like thioredoxin domain protein [Bordetella holmesii ATCC 51541]
MTPAAPVVQIWFDFASPYSYLAMARVHVLASQAAVLYELQPFLLGPIFQAQGWNDSPFRLYPGKGAYMMRDIARLALLGK
SQPWGLDFCQAVFGANFAQDRDIQDEDVMREILQNLGLDATDWIARAKTEATKEALRQQVDRARQHGIFGAPTFLVGDEM
FWGNDRLEDALQWARDGRQA
>AHV91256.1 hypothetical protein D560_1203 [Bordetella holmesii ATCC 51541]
MTLRKFVFAAALALTAGATAVAADYKVGQIEVDDLWVRASAPGQENGAGYLEIENDGKMADRLVSVSSPAAQRVELHTVK
NENGMARMREVEGGIVVPADGKVELRPGGYHVMFLKLKAPFAEGGSVPATLTFEKAGEVNVNFKIKAVSHNAGMSHGHMS
H
>AHV91257.1 fumarylacetoacetate (FAA) hydrolase family protein [Bordetella holmesii ATCC 51541]
MPREEGIERGIQAGLIGHAARVVGITRVAWPFRVTDDLRQTAKQAVVAGRDDDFAVRGGIAFVRHDAGGARTVPSRCLAA
SQYLRGDQGHPGRRRLEQGHIYDPAAPACLALQQRGQHTDDRPHARAHVNDGCTHAHRGSAGFAGGAHDAAECLHQRVVA
RMLPQRPGTSERTHIAIDQGRLECQQRRATQAQRVDLTGPQILQHDVGALGDEAPQGVGLLRVTQVADDGLLVAVERLKQ
RRGAFLEGRAPGARGIAIGLNYFDHAAEVGAPIPKEPIIFMKATSCIQGPDDPVMLPEGSLKGDWEVELGVVIGQRARYV
QEDAALDYVAGYCVVNDVSEREFQMDRGGTWDKGKGCDTFGPIGPWLVTPDEVPDPQALDLWLDLNGQRMQTGNTRTMIF
SVKTIVSYVSRFMTLLPGDVIITGTPPGVGLGMTPPVFLREGDVMTLGVQGLGSQRQRVVGFAR
>AHV91258.1 hypothetical protein D560_1315 [Bordetella holmesii ATCC 51541]
MTAGGAQRRFSPANFFSILSMNQAISLVCPQRASCVLAAFGLKSKKQPLI
>AHV91259.1 hypothetical protein D560_2845 [Bordetella holmesii ATCC 51541]
MTTLSDTEQLRSEHAALLQAYGRIQADCSVRLRRQAERIDHLENALFQTRLAVILRDTRMAWAEADQQALREAAQLPRRK
TLARQVEQLMERVRTLARQRNGAGTRAVLCVGGDGNTAGLARQLVESTGGRFLTHEGEEEALEASLHAADLVICQTGCIS
HDAYWRVRDHCKRTGKQCVLVDSPEAVIQPPASRKPG
>AHV91260.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MVGRFIDRVPLKSLYRTIALIQVPLLLWAAWAQGWALYAALLGAMIFIFGAIPFTDAMIVRYVDDHSRSRVAGMRLTVSF
GVSSLAVWLLGPVVKQVGFTTLLLVMALIAACTAAMVTMLPAEAHGRQKAGVAPQP
>AHV91261.1 hypothetical protein D560_0590 [Bordetella holmesii ATCC 51541]
MKDPEARAGKALRRLLEKIPILQVEGIEAEAMSDDWEPDLIARLLVDGLQHLLICEYKSNGQPRYARSALLELRNYVAQR
TPEATPVFIAPYISPAVRQLCEEKGVSYLDLEGNARIAFRGVFIERMVTDKPAAEQRELKSLFRPKSAQVLRTMLREPGR
AWRVTELSKISGVSLGHVSNVRTGLIDREWARASDDGLVLSDPDALVDAWRDSYTAPPGERLRFYTPLHGSAFEEAARSA
LRAKDGLGHAAFASFSAAQWLSPYGRTGTHYFFADEDGLRELQATLKLTPAAKGENVVITVPKDTGLFADTIEPAPGAVC
TSLVQTYLDLSIAGERGAEAADHLRKEKLTWPK
>AHV91262.1 hypothetical protein D560_0624 [Bordetella holmesii ATCC 51541]
MAPSAKLAYQARLDARSGKHTGPTANVAPGHVQANLAILPAALAADFLHFCQLNPKPCPLLAMSEPGNPSLPLLGEDIDI
RTDIARYRIWKNGELVAEPTDVRDVWRDDLVSFLIGCSFSFEEAMLDNGLPVRHIEQGCNVPMYRTNVPTRQAGVFGGPL
VVSMRPLKAADAIRAIQVTSRFPSVHGAPVHFGDPSFIGIADINRPDYGDAVEIREGEVPVFWACGVTPQSVVAAVRPEF
CITHAPDHMLVTDLLNSRVAIL
>AHV91263.1 ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Bordetella holmesii ATCC 51541]
MTLRITLGAALLAIPLAILAGLARLSSQAWLRMISLVYVEVFRGTSALVQLFWFYFVLPMFGVRLPAILVGIVVLALNAG
AYGAEVVRGAIQAVPAGQREAGVALNFTRRQVMRRVILPQAFAAMLPQAGNLLIELLKNTALVSLITITDLTFRGQLLRS
ETLQTTEIFSIMLLMYFAVALCITGAVRWLEKRVRIQ
>AHV91264.1 hypothetical protein D560_1454 [Bordetella holmesii ATCC 51541]
MSGHVLCSFSIPSARYTDKADGSKRCGQQENGGLEHRKARQGQTGLGGLGRSITARGH
>AHV91265.1 TRAP transporter, DctM subunit [Bordetella holmesii ATCC 51541]
MIATLLFVVFIGLMVIGVPVGVALGLAGTLAIVLSNTDVAWFGLLAVPQNFYAGLAKYPLLAIPMFVLVGSIFDRSGVAK
RLVDFAISIFGRSPGMLPMISIFVAMFLGGISGSGPACAAAVGAVMITAMSRAGYPKPYSAAVVAAGAATDILIPPSVAF
IIYSVLVPEASVPALFAAGMVPGILAGLALIVPAVWMARRHGMGQLEVKLPRPPFWQSLRDVLWGLAAPVLILGGMRLGW
FTPTEAAVVAVFYGLFVGMCVHRTIKVRDLFPILREAAELSAVIMMVVTLAGIFAWALSTLSVIDPTTNAIVHSGLGEYG
VLALLIVLLMTVGMFLDGISIFLIFVPLLMPIAKAYGWDPVWFGVILTLKVALGQFTPPLAVNLMVSCRIARVPMESTIP
WVIWLLAGMMVVLIAVLAYPQLALWLPHRLGY
>AHV91266.1 putative 2-aminoethylphosphonate ABC transporter, permease protein [Bordetella holmesii ATCC 51541]
MRRRLPGWAGRWTCIAGQSGYALALVICLALPLAAILARALSGEQGGMSLLRDIVLQADFMAMIGRSLLVGLTTATIVVP
FAYCYAYGLTRTLMPGKSLLRMLALLPLLAPSLLPGIALIYLLGNQGLIKAWTGGATIYGFWGIVAGEVFYTFPHALMIL
VTGLTLADGRLYDAARAMGAGSLRTFLTVTLPGTRYAVFSACCLVFTLAVTDFGVPKVIGGDYNVLAVQAYKAVVGQQNF
SKGAAIALMLLIPAVLTFALDRRMRTRKGAALSGRSQRYEPRPHALRDSGFLLVSILVALALTTLVGVAVWASFIKMWPY
NLSVSLRSYDFDNMDGGGWLAWRNSLTLAALTALIGTALVFGGAWMIEKLPARAATRPLRSLVNLLALVPMAVPGLVLGL
GYIFFFNSPSNPLNGLYGTMALLVICTVVHFYTSAHLTAVTALSALDPEFEAASAALKVPAVLTFWRVTLPMCLPAVLAT
ARYLFVSAMTTVSAVVFLYSPSTVLAAVAVLNMDDAGFIGPAAAMCTVIMASSAAVSLLLHGLGRALLSHTQNWRGVPRD
>AHV91267.1 inner membrane transport protein ydhP [Bordetella holmesii ATCC 51541]
MNTPLPAEQSGTKATLPLLALAVGAFGIGTTEFGPMGLLPVIAEGVDVSIPKAGMLVSAYAVGVLVGAPVMTLALAHWPR
RKALMTLMAIFTLGNVLSAMAPDYLTLLLARLVTSLNHGAFFGLGSLVAASLVPRHRQASAVAAMFMGLTIANIGGVPAA
TWLGQTLGWRLSFAATAGLGLIAMLGLRVALPAGQGGSRLNIGAEIAVLTRPAVLAALATTVLGAGAMFTLYTYIAPTLA
ALTGASPAFITAMLVLIGVGFSVGNIAGGRLADRSLDGSLVVFLSLLIVVMLAFPWLAQSHTGVAMALLIWGIATFAVVP
PLQMRVMRAAAEAPGLASSVNVGAFNLGNALGAAAGGAALSAGMGYSAVPLAGALIAGAGLLLVLSHMLRSRRAPSAQRC
>AHV91268.1 flxA-like family protein [Bordetella holmesii ATCC 51541]
MAISSVGSSAYTGLSRSTNSSSGTSDSSLQKTLRELQQQLRQLQQQMDRVRNSNATAEQKAQQLQALNTQAATLQTQIQK
VLQQQLQQLQT
>AHV91269.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MSIRALLLICLTLFMAGCANPDDFAHPGPPHPGAANPYSNGGFHDAGPNYPNTGR
>AHV91270.1 putative signal peptide protein [Bordetella holmesii ATCC 51541]
MQFSVFTFVQRVFLACALIVSGAAAAQTPDPKGAPDQFVLNAADHAINVLKADRGVKSGDLNHINQVVNQNILPYVNFEK
TTRLAAGRFWRQASDDQKKRLAEAFRGTLVRTYSGALKNVDNGTTIKLLPMRGDPNADDVVVRSLISQSNSQPVQVNYRL
EKTPQGWRIYDLNVEGIWLIENYRNQFAQQINQTGIDGLINALNQRNQ
>AHV91271.1 response regulator [Bordetella holmesii ATCC 51541]
MARILVVDDEVGIRELLSEILYDEGHTVELAENAAQARAARLRSRPDLVLLDIWMPDTDGVSLLKEWASQGLLDMPVIMM
SGHATIDTAVEATRIGAMDFLEKPITLQRLLKTIAAGLARGRLPAPASAPVVHATPAIALEDELDPPVAQAHPAVGEPAS
ANNGLLGSISLDQPLREARDEFERIYFEYHLVRENHSMTRVSERTGLERTHLYRKLKQLGIESARKRGS
>AHV91272.1 pilZ domain protein [Bordetella holmesii ATCC 51541]
MDHEDYLVTGRLEIVHLLLTIMQRQSLVFMHVPGRPINSVTSILAVDADRGELFLDAAQESSVNDRIATGERVSLETSLD
NIRVSFSGSEIAPAVYDGRSALCMPLPAAISRMQRRDSFRIEVPVLKLATWSMAGRRLTLAIKDISSTGLALSDVDQQMD
TSPGVEYDGVLSLPEIGVFALTLRVVHHADQDAGKGKILRRIGCTFVDLENGIRIRIRIRIRIRIRIQSYVNTLQRAMIA
RQRGN
>AHV91273.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MALLEVKDLTKRFGGLVANKDISLSVEQGEIVAIIGPNGAGKSTLFNGLVGQHEPTSGSVTFHGEPLAGKQPEQVAALGL
VRTYQIPRSFGQMTVLENAMVGALLRHPRLADARREAMRVLELVGLAERHDVKASGLNVAGQKRVELARALATEPRMLLL
DEVAGGLNPSEAIALAEILRGIHAAGVTLIIVEHVLEVVMRLAQRVLVLNFGQMIAEGPPQDIVRHPAVIEAYLGRKHRV
>AHV91274.1 ribosomal protein S7 [Bordetella holmesii ATCC 51541]
MPRRREVPKREILPDPKFGSVELAKFMNVVMLDGKKAVAERIVYGALAQVQTKTGKEPIEVFTLAINNIKPIVEVKSRRV
GGANYQVPVEVRPVRRLALAMRWLREAAKKRGEKSMDLRLAGELIDASEGRGAAMKKREDTHKMAEANKTFSHFRW
>AHV91275.1 hypothetical protein D560_0492 [Bordetella holmesii ATCC 51541]
MPLDGVYLDLHGAMVAEHLDDGEGELLRRVRELIGPDLPLVASLDLHANVTRDMVRHADGLVCYRTYPHVDMAQTGARAA
ALLQKRLQGLPRPYVAWRCLPYLISLCWQSTDIEPARSLYRQLGELEGRTAFSLSFATGFPAADFPGCAPSVWAYAHSQS
DADACADEMTRAVLNAEADFGGRLYDPDEAVQEAMRRAATASKPVVIADVQDNPGAGGSSDTTGLLRALIRHRARRAAIG
LIVDPRQRLPRTAREKARRCELHWVDTRVFPMTNP
>AHV91276.1 hypothetical protein D560_1597 [Bordetella holmesii ATCC 51541]
MSAALTLGAGAQAQDALITFTSTRDVGQTVAQLRTGLAAHGMTVFAEIDHAAAAQAAGLDMPPTRVLIFGNPKAGTPLML
AEPDLALDLPLRVLVRERAGRVEVLMHRLPSPGLPADRQGGLAAAADLVARSMGQK
>AHV91277.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MFEAAARLSSFTAAAQELNITHSAVSQQIRALEDFIGQPLFARAARGVTLLPDAQAYFADVQASLERIAQATATMKQPRE
LRQLRLYATPSLAMKLLIPGLADFQRLYPEIDVEVTTLGRQFIDRADGSQDLIIRHGAMHKPDFVCQPCLEDSYVPVASP
RFIASHRLRRPADFVGHPLLKVRGCLDIWTQWFGLAGVDVPSMLPGPVFDHDFLSMQAASNDLGLALAPWCLLAEDIQVG
RLQPIFEALRLPNAGVHALFRPDSPAAPLARLFLDWFARPNKEYA
>AHV91278.1 ABC 3 transport family protein [Bordetella holmesii ATCC 51541]
MSLWQALAAPFFDFGFMRRALAGAVALAFGAAPLGVFLVLRRMSLMGDAMSHAILPGVAAGYLLAGLSLGAMMAGGIATG
LAVALLSGLVTRLTPLREDASFAAFYLISLALGVLLVSLRGSNVDLLHVLFGTVLGLGDDALWLAGIVSTLTLFGLALLY
RLLVAECFDPGFLRAAGGRGWLAHFGFLALVVVNLVAGFQILGTLMVVGMMMLPALAARFWAPRVATQMPLAIGLAALAS
WVGLVASFHLDLAASPAIILSAGLIYLLSLMLGPQGGLLRRKPGRVFSKEV
>AHV91279.1 hypothetical protein D560_2644 [Bordetella holmesii ATCC 51541]
MNKQLNTNDLVRRPSQSQLNDTPINVGDVVHLRLADGKAIRATVIYNAPINGTTTYTTELIQPCGAKRGQRIRFRHEHVH
RIESVSRQRRLSA
>AHV91280.1 putative RNA polymerase sigma factor fecI [Bordetella holmesii ATCC 51541]
MPTAEFPAQHDLHTLYSDHHSWLFRWLRKKLGNSFDAADVTQDTFVNVITAGSMGSIREPRAFLVTVARRLVAHRHRRQV
LETSYLEILASLPQEIAPSPEAQLLALEALQELDRVLDGLPPKAKEAFLLVHLEELSYAEVANRLGVSASSVKQYLVRAN
RQCLFALSA
>AHV91281.1 4-aminobutyrate transaminase [Bordetella holmesii ATCC 51541]
MKNRDLNTRRALATPRGVGVMCDFYAVRAENATLWDAEGKEYIDFAGGIAVLNTGHRHPKVMAAVAAQLDNFTHTAYQIV
PYEGYVALAERINALAPIDGLKKSAFFTTGVEAVENAVKIARAATGRSGVIAFSGSFHGRTHLGMALTGKVAPYKLAFGA
MPADIYHIPFPNKTQDISVADSLKSLDLLFKVDIDPKRVAAIILEPVQGEGGFNVTPPELMVALRKLCDEHGILLIADEV
QTGFARTGKLFAMEHHSVQADIITMAKSLGGGMPISGVVGRADVMDGPAAGGLGGTYAGNPLAVAASLAVLDVIAEEKLC
ERSQALGQRLMDRLNGLRGKVPAIADVRGLGSMVALELHDPATGKPDAEAVKRVQQKAIEKGLLLLSCGVYGNVLRFLYP
LTIPDAQFDRALDILTEALTA
>AHV91282.1 type II/IV secretion system family protein [Bordetella holmesii ATCC 51541]
MLNVLSSAIPEQERIVTIEDAAELRLSHEHLVALEARPVNLEGRGTIEIRDLVRNALRMRPDRIVVGECRGKEAFDMLTA
MNTGHEGSLTTLHANSPRDALARLESMVLMAGLELPMLALREYVAACIDLIVQQARGADGVRRIVAIAEVCGIESGTIQL
QEHFRYEPQSGFAAAEWACWQAEQGFS
>AHV91283.1 polyamine ABC transporter, ATP-binding family protein [Bordetella holmesii ATCC 51541]
MSEARYTAQYSGDPDEFVKVVDVVKIFGDTVAVRSVNLAVRRNEIFALLGSSGSGKSTLLRMLAGFEDATSGQILLDGED
ITAVPPYRRPVNMMFQSYALFPHMTVEANVAFGLKQEGVDRAEIHDRVFEALNLVQMAGYSRRKPHQLSGGQQQRVALAR
SLVKRPKLLLLDEPMSALDKQIRQKTQIELVKILEQVGVTCIMVTHDQEEAMTMAHRLAVMTEGQIVQCGTPQDVYNFPN
SQFVAGFIGTTNLFTGTIVVDEPDHVAIESEELTRPLFVNHGVSEPLGMQVHVSIRPERLVVSREQPEGEYNWAHGMVTH
MAWMGSYGLYQIRLDSGKTVEASVASLLLSNMDAPGIDEEIFVSWDADSATVLSS
>AHV91284.1 hypothetical protein D560_3666 [Bordetella holmesii ATCC 51541]
MIRSMTAFGNARVDLEQGSLALELRSVNSRFLDLHFRLPDELRHAETPLRELLTGQLARGKVEVRVSFTRNATAEVTQLD
PQWLGQLADQLQAARRILPEVSAPRLVELFNWPGQRINDALDPQIWGAACVRAAQQALTQLQDGRAREGERLAQVMRDCA
DGVGRIVELVESHLPQLLADHRDKLATKLRESLEAAFPGGFAHISGAELTERVAQEAGLFAMRIDVAEELARLRSHLEEL
RHLFSEGAGKASGKGSAKGSAGKRLDFLFQEMNREANTLGSKAGSLEVTRAAMDLKLLIEQMREQAQNIE
>AHV91285.1 alanine--tRNA ligase [Bordetella holmesii ATCC 51541]
MQFERDAAGTMTRLPKPCVDTGMGLERIAAVLQGVHSNYEIDLFQKLIAAAARETGINDLEDNSLKVIADHIRACSFLIV
DGVIPSNEGRGYVLRRIVRRALRHGYKLGQTKPFFYRLVPDLVAEMGEAYPELATTAQRVAQVLKQEEERFGETLEHGMK
ILDVALAQVPKGGQLDGTTLFTLYDTYGFPVDLTADICREREVEIDMPGFEAAMERQRDQARAAGKFKMAEGLSYEGAQT
RFEGYEQLELSGVHVTALYVGGTQVDAVQAGQQAVVVLDATPFYAESGGQVGDTGLLQADGLRFAVGDTLKIQAGVFGHH
GVLEEGTLKVGATLLARVDPVRRGRTVRNHSATHLMHKALREVLGSHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEG
IVNAEVLANQPAQARVMAYDDAVKGGAMALFGEKYGDTVRVLDIGFSRELCGGTHVSRTGDIGLFKIVSEGGVAAGVRRV
EAITGDNALVWVQEQNALLQRAAGVLRAPSAELPERIAQVQEQVKALEKELEQARSKLAASAGNDLVDKGTVEIKGVKVL
AAAIADVDPKALRGMVDSLKDKLKPAVVLLAASADGKISLAGGVTADLTSKVKAGDLVGFVAAQVGGKGGGRPDMAMGGG
TDASALPAAIASVQGWVNERL
>AHV91286.1 hypothetical protein D560_2658 [Bordetella holmesii ATCC 51541]
MTRIVLARFDSMASARSAAHALIADGITEQAVSLLLEDGCHPAPSHRGMDLRLPSVRYAAMASCEDSIGCMHGSSEPDLR
NWKSPTPQFTQGARPDEHP
>AHV91287.1 cytidylyltransferase family protein [Bordetella holmesii ATCC 51541]
MLGQRIVTAIVLLIILAATLVSANPWWFIALLALGASCAAWEWLRLTLPASARVIAVGIPVLLFLAMLWLADIWMRGQGE
AVYVTARAVRGLIPAVALVWLVGAFAVVYQGRSDADPVSLGWSVFAVFAVLAAWSALALFFLLRGPVYVVSLLALVWVAD
IAAYFAGRAFGKRKLAPRVSPGKTIAGAVAGVAGAVIWTVGSGYLPGTFGQDLLRHGLVLAVPAAALLGAMSIVGDLFES
LLKRRAGRKDSSNLLPGHGGVYDRIDAVLPVAPLALLMSGVLF
>AHV91288.1 hypothetical protein D560_2468 [Bordetella holmesii ATCC 51541]
MFIVEAPAPQGIHADLLSGDNLPIGHHGIVHLLRHDR
>AHV91289.1 thioesterase superfamily protein [Bordetella holmesii ATCC 51541]
MEDAFSHQLSMTILMTPDMANFSGNVHGGTILKYLDQVAYACASRYAGHYVVTLSVDQVVFREPIHVGELVTFLAAVNYT
GRTSMEVGIKVVTEDIRRKLVRHTNSCYFTMVAVDEQGQPTAVPALELRTLEERQRFEAAKQRRALRQEMENRHGAIKKQ
AHDPSAAT
>AHV91290.1 bacterial transferase hexapeptide family protein [Bordetella holmesii ATCC 51541]
MTQRICLLGAGGLGREIQAWLDEHVVGFVDTRDEMQGKEVAGLPILGRPEDVPIADGLSFLCAVGSPRIKRLLVAGILAR
GGHMLALPPRMLGARSEFGVSCAFDGVRVSPDCRVADYVHLSAGVVVGHDSEIGAYCHIGEGVFIGGECRIEEDVVIHPR
ACISRGVVIGKGAEIGLGAVVLRDVPAEAVMVGNPARRVG
>AHV91291.1 putative permease [Bordetella holmesii ATCC 51541]
MLALAGVGGFLVALLTFWLLQLGGKLITWRRFFRITEVLLLLLAGSLLVGGLDHLISLDVLPTIVDPVWDSSWLLDDSSG
VGKILADFAGYRAFPALISVLLWLAYWLVVWLFLRRADGQAQAAQVTARS
>AHV91292.1 tonB family C-terminal domain protein [Bordetella holmesii ATCC 51541]
MRQQMRLNFSSEIPPVVRTLGWNQPVYPLKARRMMQEGRVVLRIAMQPSGEHEIEIEESSGWPVLDQSALEAMRGLAFDD
GQPLLRPTRFLLPVRFRIAPPAASQD
>AHV91293.1 hypothetical protein D560_3807 [Bordetella holmesii ATCC 51541]
MKRSAVMSTLLRPPQVFDSFDHFFSLTADGTLSCLGPLMRSAQAPGWLAGLKTAADTASVHGHVWERHTHGDELLSVVAD
HVVVHWCDGEHTSGQEDLPAGKSLLVPRGLWHRLELLCASQIFFLTPAQGGEHRKQEV
>AHV91294.1 poly-beta-hydroxybutyrate polymerase [Bordetella holmesii ATCC 51541]
MSVAPDTLADIQAEFSREWLRICDEAQRGVLPVPADRRFSSPAWQADKRHLLMAHAYLLSSRVLHRMVESAQVSEQLRTR
LRFSIMQWVDALSPANFLAFNPDAQQCMVESAGRTLNAGLANLLADLKKGRITQTDESQFEIGRNVAVTPGVVVYENRLM
QLIQYSPQTAKVFARPLVVVPPNINKFYILDLQPENSFVRHAVEAGHTVFIVSWRNPLASDSDGVDTATWSDYLDEAVLK
ALSVAGEITGQKQVNALGFCVGGTMLAAALALADARGQQPVASLTLLTSLLDFHDTGVLKVFVDEGHALLRDQQLGQGGL
MPARDLATTFSFLRPNELVWNYVVGNYLKGQAPPAFDLLFWNADSTNLPGPFFSWYFRNTYLENNLKVPGLAQAADTPLD
LTRLAMPAYVYGSREDHIVPWQSAYATTQLLRGPMRFVLGASGHIAGVINPPAKKRRSFWRANPTLPCRAIPTLGWPMRA
SSLAAGGPIGRNGWPNTQASRLLHRAPWGVKNTHP
>AHV91295.1 wbgU [Bordetella holmesii ATCC 51541]
MTNRYEVVRAELQAQPRKWLVTGCAGFIGSNLLEALLKLDQTVVGLDNFATGHQRNLDEVRGLVTPQQWARLTFIEGDIR
DLDTCRRAVEGVDNVLHQAALGSVPRSLKDPITSNAVNIDGFLNMLVAARDAGVGAFVYAASSSTYGDHPALPKMEPNIG
RPLSPYAVTKFVNELYADVFARSYGFETVGLRYFNVFGRRQDPNGAYAAVIPKWTAAMIQGQTVVINGDGQTSRDFCYVD
NAVQANILAAMAPAQGRNQVYNVAFGGRTTLNQLFDFLKESLGRQGVRYGKSADHAEFRAGDVRHSQADISKAGELLGYQ
PAFDILRGLDAAMPWYTQFLR
>AHV91296.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MFGPPDRFPYAEGRSYTPPDAPYERLAALHRHIGVTHAVVVQAACHGADHSALLDALSQSQGRYRGVAVIAPDIAEAELQ
ALHVAGVRGARLNFVPHLGAPPEEATVLALAGRIAPLGWHFCLHVDGASLPGLLPLLKRLPLPYVVDHMGRIQAARGLND
AAFRGLLGLAAEPGAWVKISGIDRISQGKRPFHEGLPFMHALAEAMPERVLWGSDWPHPNVRGDMPDDGEVVDALFLAVP
DAELRHRILVDNPARLYELA
>AHV91297.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MTQQQDLTERVALVTGAGIGRATAHLLAARGAIVGVNDLKQDLVEATVASITAAGGRAFAVTQNVSTREGITQAVQSAAG
HGGRFDILINNAAWVRYQSVPEIQPETMDRMLDIGFKAVVWGIQAAAAAMDGARGGAIVNVASTAALKSAPNSIVYSGIK
AGILGITRAAAAELGAQNIRVNAVCPSAVPTEGTQRNRNAERDARRVASTPMGRLGTVEDIASGIAFLASDEARFITAQG
LVVDGGITFTTL
>AHV91298.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MSAQARRSQAAAANDARILALSLNSRPDMMAADRHNQVSDALANDVVGTGQTVPAIVAHAVALFAERPFLEVAGGACESY
AQTGRHVTELAARLHGLGVRAGHRVLSMLSNSHGAVHAWLAANQLNAVDVGINTGYKGASLEHAANLSQAQVMLTTAAFL
QVILPCAPRLTHLRTIVLLDDAVYEGSVPDTLRVVRCADLRAAPIHDTLAHHAEPSDIASIIYTSGTSGPAKGVLLPHAQ
IALLARRSAEKMDLTEHDVFFSFYPMYHMAGKFMSVLATMVAGGKVVLDSGFDASQWLGRIRDYGATVTAAHGPMLEMVY
AQPPLACRQPAPAQVDTHRTLSQTYCRRFRTAL
>AHV91299.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MVVGMSLSVLDATIANVALPTIAADLNAPPSAAVWVLNAYNLAVVTMLLPMSAVAERIGFRRMFTIGLTLFTLASLACAV
SSTLLQLSLARMVQGIGAATLMCMFGGLVRNIYPTSLLGRGISINATTVALMSVLGPTIGSFILSVADWRWIFAVNLSIG
IVLMMGLRFLPEVQRNTARMDYVSAVLSMVTLGCFISGVDSLAQDVLRSLGLIAVSVVSGLLLIRRSWGQTSPLVPIDLL
RIRTVGFAVMASASTFAAQMSSYVALPFYFQHVLGRPHLEVGLLMAAWPLGTGLIAPVAGFLSDRYSAAVLSCAGRAPWW
WACCGWCVRRWTLPIHA
>AHV91300.1 gluconate 2-dehydrogenase subunit 3 family protein [Bordetella holmesii ATCC 51541]
MPDEAAFVEALVMHMVPAAGGLGGSGMDLGLNTYIDRALAGNWGKGDRLFMQGPWQLGTPNQGYQLALSPAELMRTGILQ
TNASCSKKYEGKSFDMVTEDQREEILKGLESGTIAFEAGPPSKVFFTLLYQLVVEGLFADPIYGGNYDKAVWKEIGFPGV
VATNARNIVEFKNKPFPNKPLSIADLA
>AHV91301.1 peptidase M50 family protein [Bordetella holmesii ATCC 51541]
MNDIIQTIAVYAIPVIFAITLHEAAHGYVARLFGDPTAQQAGRVTLNPLKHIDPVGTLLVPVVILLTSKLLGAGGLLFGW
AKPVPVDFGRLRRPKRDMLWVALAGPASNLLMAIVWVLCFRLYREMELTENFWYEMAQAGISVNLVLMALNLLPILPLDG
GRILFSLLPHRLAWQYSRIEPYGLIIVLLLLVTDVLWVLMEPIFSLGASIVNWFL
>AHV91302.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MIVPFAAGQSADIFARAFAAELGKKLGQSIVVDNKSGAGSNLGIAAAARSSADGYTLLMAGSSMAVNQTLYPKERLGYDL
KKDFTPITGIYTVPLMFASNPASQIASLQQYVDKAKGAPGKLSYASAGVGGTQHLAAAMLNHAMQIDVQHIPYRGSPAAQ
ADVVGGQLPIIADALPAILPLIQSKKLTPLAVTTAKRLEQLPDVPTVAEITGRKFEAIGWGMLLTPAAVPQDIKTKISQA
SQEVLNSPAMAKFMRDRASGVLSQTPEQAQRFLDQEVTKWPKRSRSPVPRRNNSV
>AHV91303.1 L-2-keto-3-deoxyarabonate dehydratase [Bordetella holmesii ATCC 51541]
MASLSHPRYRGIFPVAPTTFHADGRLDLESQKRCIDFMIDSGVDGICILANYSEQFLIADDEREVLTRTVLEHVSGRVPV
IVTTTHFSTRVCAERSRRAQDMGAAMVMIMPPYHGATFRVPELHIHQFFRGVSDAISVPIMIQDAPASGTTLSPGFLATM
AQQIEQVSYFKIETAGAASKLRELIRLGGESIEGPWDGEEAITLLPDLDAGATGAMTGGAFADGIRPIIEAHRQGDRDLA
FDLYQRWLPLINYENRQSGILTAKALMKEGGVIACDAPRHPWPEMLPAVRSGLLETARRLDPLVLRWAK
>AHV91304.1 hypothetical protein D560_2994 [Bordetella holmesii ATCC 51541]
MDPELLNELVRREMPFGKYQGRLIADLPGHYLTWFARNGFPKGEIGRLLAVMHELDHNGLRPLLDPLRAKKP
>AHV91305.1 chrR Cupin-like domain protein [Bordetella holmesii ATCC 51541]
MEQIKPYTGPQERHMLPELFVPDVLAADDDRLWVPNGENRWSRPLCLNLSQGYWVHLTRFKGRGFLSRHRHPAPVHAYVI
KGSWRYLERDWVARAGSYLYETPGDIHTLVVDEDQDEMITLFQNHGAITYYREDGSIEKVVDAFYYANLAEAHFEKVGLG
RDFVKHFIR
>AHV91306.1 enoyl-CoA hydratase/carnithine racemase domain protein [Bordetella holmesii ATCC 51541]
MFADSAFAGETQSRIEAVAGNAPLTMYAARLALRHLLNAEPAASEVEQAVQQCFGSADYREGQAAFRERRPPVFKGR
>AHV91307.1 cell division topological specificity factor MinE [Bordetella holmesii ATCC 51541]
MSFLSFLLGQKKASASVAKERLQIILAHERSGRGDSPDYLPQLQQELVAVISKYVKINPDDIKVNLERQDTLEVLEVKIE
MPQSETQASA
>AHV91308.1 divalent-cation tolerance protein CutA [Bordetella holmesii ATCC 51541]
MLRDDDVVLIISNAPDTLVAKRIAHVLVEDGLAACVNLGQPGLSVYRWKDEIEGAEEVPLTIKTTYGMQQAVVQTLAGLH
PYEVPEIIVVPVIGGLASYLDWVREQTRNPGAG
>AHV91309.1 multiple resistance and pH regulation F family protein [Bordetella holmesii ATCC 51541]
MGLLLYLSASFALTCFAVGLGCAVIRILRGPTAQDRVLGLDAVYIQGMLIMLVFGIREGTGVYFDIALLIALFGFVGSTA
MAKFLLRGEVIEP
>AHV91310.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MAAPIVRQALYLEVADRLRDMIRAHALACGQGIDEVRLTEQLGISRTPLREALKVLANEGLVRLEPCRGSFVNELAVDDL
EQIFPLMAMLEGRCAYEAAQKATAADLLALGPLHDRLREQAAAGQMDEYYDTNYRIHVQVQSLADNRWLSDMVDKLRKVV
GLFRHKSLALPGRLQESCAEHLAIYAALQARDPEGAEALTRKHLLRQMEALRRLAHQPPAQRLPDSEDQDHVISGQTRAR
ARRASSRAG
>AHV91311.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91312.1 smpA / OmlA family protein [Bordetella holmesii ATCC 51541]
MLGTLVLAAALAGCSSGKWGFPYRADMQQGNWITREQVALLQPGMSREQVRFALGSPTLTSVLHADRWDYPYYFKPGYGK
AQERHFTVFFENDRLVRWDGDQQPELQPFQINLPNAAALEKADNAEIAAEKRAEQAEKTEPVHSNIQINTATQPATSTPG
MPGSSPEPLK
>AHV91313.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MGGSVAWCREGRVARVELAHPGRLNAITVAMWQGLRDVFVQIAADPQIHCVILRGADGNFAAGADIREFAHQRNDLPSVM
NYHRGMLAPALAAIAQCPQPVVAQIEGVCVGGGLEIAAQCDIRIACCDARFGAPINRLGFPMAPDEMKGLLALLGPANTL
AVLLEGRVFDAAEALRLGLLTRVAAPGCLNSTVQASVDHILAGAPDAARRNKRLVRRLQQGTPLSEAEYLDFFSYADSHD
HREGVRAFLAGEQPIFNGD
>AHV91314.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MKIVLAVSSMNAGGAERVAATLANAWAQRGDAVTLLPTYSGGGDCFYPLASDVELVWLAKAVPARGALAPLKRLLGLRRL
IRERRPDVVVSFLTNVNVGAILATRGLRQPLIVCERTNPVVDTTTGKTWRRLRRWLYPRADVVTVQAEDTVAPFAAQVPG
IRHMAVIPNPLPAELLQVPLARLEADAQGRRRLMAMGRLVPDKQFGMLIDLFAGLAEAHPDWDLWIWGDGPLRERLEAQV
AGLGMQSRIQLPGRTNQPWQALDQSSAFVLSSAVEGFPNVLLEAMAKGLPCAAFDCPSGPREMTRDGADALLVREPAVMR
DALVRLMSDAVLRAELGQRAADSVRERYALPVVLAQWDELFALARK
>AHV91315.1 MAPEG family protein [Bordetella holmesii ATCC 51541]
MMAAALLPLVAAIACKAGGTGFDNREPRHWLSDQQGWRGRANAAQANSFEALPFFFAAVLFALYNQAPREQLVVLMGAWV
VVRLVYLALYVGGHGTLRSLAWLAALILNIVILFAGVH
>AHV91316.1 protein TolQ [Bordetella holmesii ATCC 51541]
MQVTSDMSMSSLILNASVPVQFIMLLLLGISVMSWTYIFAKRMAIKRAHQQTRRFEDDFWSGGDLAMLQQAVASRRDEQG
ALARIFDAGMTEFLKARRGGGDSVELLDGPRRAMRAAYQREMDSLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSN
MQQATLASVAPGIAEALIATAIGLFAAIPAVVAYNRFTNDIDRISIRFDSFVDEFLNILQRQVR
>AHV91317.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MLRNRSPGSVLPALFLMLCLSLAACGERNANWSLYDVKGHLPDLRFSLPAAGGKTLSSEDLKGKTVLLFFGYASCPDICP
TTMAQLTAVLQQLGERARDVRILFVSVDPHRDTPDILQAYVNAFNNQALGVTGSEKQIADMARRYRVAYQIEKPKPGYAA
DQYDVTHSRGVYIFDNEGRARLLASDTDSVADITKDVKHLLDITQG
>AHV91318.1 fecR family protein [Bordetella holmesii ATCC 51541]
MPASTHALTLPCGRLISRATANAAADWLTLLMSGEAAEQEHQHWMQWRQAHPDHEAAWQHIESIAGRMKSLERTPAYAAL
SFYGPAGKPASPARRRATRMLLWGGATCGLGVLVSRTGAWQSGTAQYRSGTGERRDVTLEDGTQLTLNTGSAVNLSFDAH
SRQILLIDGEIMVTTRHQPGQNDPRPLMVRTAEGSIRSLGTRFTVRQHAGLTSVAVLESAVEITPLQNAGDSRLLHAGER
AQFSRQEVQPPRPIGEHTDAWTRGYLNADEQRLADFLAEVGRYRPGILRVAPGSPICVCPACFRWATPTEFWIRSATCCQ
>AHV91319.1 recX family protein [Bordetella holmesii ATCC 51541]
MAYLSRREHSRVELARKLRAYAESAEEIETVLDALQKEGWQSNARFAQSLVHRRAPRQGTARILQELRQSGVEDADVAEL
RDGLRATEYDRALEVWRRRYGVKPQDRSAYTKQARFMASRGFAHDVIRRLLGEGDDESA
>AHV91320.1 chromate transporter family protein [Bordetella holmesii ATCC 51541]
MMSVLISLALIFTQLSLLAFGGGNTILPEMQRQVVDVHHWMSAADFGALFALGQAAPGPNLMVVTLVGWHVAGWMGVLVT
TIAKFGPSSVIVVLALGLWERFKEKPWRAVVQAGIFPMTAGLMAASAALITYASVHDWVTAAIAAGAALSATLTRVHPLW
LLAAGALTGLLLGG
>AHV91321.1 phospho-N-acetylmuramoyl-pentapeptide-transferase [Bordetella holmesii ATCC 51541]
MLLEIARWLSDDVRAIGVLEYITLRAVLACATALLIGLAAGPRVIRKLTEMKIGQAVRAYGPQTHLVKTGTPTMGGALIL
ISIAISTLLWADWTNRFVWVVLLVTFGFGWIGWMDDYRKVVHRDPEGMPARQKFFWQATIGLVAAVYLAFAVSAPANTEL
WPLFKAWVVSGFSMPLPTRADLIVPFFKSVSYPLGVLGFVALTWFVIVGTSNAVNLTDGLDGLAIMPTVMLGGALGIFAY
VVGRVDYSKYLLFPYIPGAAELMVLCAAIGGAGLAFLWFNAYPAQVFMGDVGALALGGALGTIAVIVRQEIVLFIMGGVF
VVETLSVMLQVAWFKYTKRRYGQGRRIFRMAPLHHHFEVGGWKETQVVVRFWIISMMLVLIGLSTLKLR
>AHV91322.1 hydrolase, TatD family protein [Bordetella holmesii ATCC 51541]
MNFPELAADLPAVLERMAANQVTHALVVSVNMPEWPGLMDLVRPQRNLWASVGVHPDYEDTPDPQPEELVRLAQDPKVVA
IGETGLDYYRLSEPLDWQRERFRRHIRAARSAGLPLIIHTRSSAEDTVRILKEEGADEIGGVMHCFTETWEIARAALDLN
FHISLSGIVTFKNAGIVHEVARNMPLDRLLIETDSPYLAPVPYRGKLNDPSKVIHVAEKIAELQGRTVAEVAHASTENFF
KLFSKIVR
>AHV91323.1 H+ antiporter-2 family protein [Bordetella holmesii ATCC 51541]
MQALDTTIINTALPSMADSLGVSALQMQPVVVAYTLTMALLTPASGWLSDRFGSRRVYFVSILLFVLGSVFCALSQSLPQ
LIAARVVQGVGGAMLLPVGRLAVLRAIRGEAYVAALAMISIAGQVGPIVGPTLGGWFVQSMSWHTIFLINVPVGVLGLVA
VWKFLPDDSLPDAPRFDWLGGALLSLCMVSFSLALEGPAHEHRALIASVLLSVSVLSVGAYIWHARRHANPLFRLELFSA
PNFGVGLAGNLVCRIGSSAVPFLLPLLMQLQLGYSPLHSGLMLLPAAVTGAIAKSWITPLLKRFGYTHFLIWNTVLVGAS
IAGFATFSRVTPLWLEIAVLCVFGASNSMQFAAMNGVTLKGLPPRDAGSGNSLFSMVQMLAIGLGVTIGGGLVTLFAGHS
GDAASAFRIAFAVTGLVTMTSALVFRRIDAPTRLSPQAA
>AHV91324.1 putative permease domain protein [Bordetella holmesii ATCC 51541]
MILALMFMGLRAATPRTAAALSGMAQCLGYLLVASGPLLAGKAYAWSHSWTQPLGIGVVLCVAMAGFGALAGRARLLGDG
VLPSAQKR
>AHV91325.1 sulfur transport family protein [Bordetella holmesii ATCC 51541]
MIALLLVLAGAFYLLQTVSWRQSALWIVGALLGVTLYHASFGFTQAWRVFVSDRRGAGLRGQMVMLAFGVVLFFPFLASG
TLFGMPVNGLVSPPGVSVLLGAFLFGIGMQLGGGCASGTLFAVGGGNTRMIVTLLFFIVGSVIATANFPWWSSLPALPPT
SLIKTWGLPTALVANLAVFAFIAWLTTVLEKRRHGHLISSAAHTSRPATLLQGPWPLIWGGIALVILNFATLALAGRPWG
ITSAFALWGAKILDAFGGDVSTWAYWTKQQAALAAPISRDVTSVMDVGLMLGALAAASAAGKFAPIWKVPARSLAGAIIG
GLLLGYGSRLAFGCNIGAYFSGILSGSLHAWLWLPAAFLGSALGVHLRPYFALAVEKTPAPSSC
>AHV91326.1 his Kinase A domain protein [Bordetella holmesii ATCC 51541]
MPPVLLLFLLDLAATWVMTHKIDMSVWMLEDFFWLMVAGQILLIVLFAGVIVQGVRSGLRSVNHLSEEIRLRSIDDMQPM
AVQGLPAEIAPLVTHINDLLLRLDASLAAQRRFIGHAAHQLRTPLSGLRLESELMLARPLPEDVRARAERIKVVSDRMIR
LGQQLLVLAKADPNARPQDRFVRLDLCEWVRASGAEWIPRTRASQVELDLLAPDHPIWIDGDPLLLDELLGNMIDNALRY
GAGLVTLTIGENPPSLTVEDDGPGIDPQERERVFEAFYRSPSASADGSGLGLAIVREIAHAHGAWWKLSSRPEFDGTRLT
VVFPGPRKGAQLTRHERPYESAL
>AHV91327.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MASRQSSTFLVTLLRARPARLCLAVQLALAAPAAVWAQAASATDIVFAIAPTTLDQALGQFGSAAKLTVAASPTLTRGVM
TQGLSGRYTPEQGLAQLLAGTGLQAVANPNGEGYQLRRAPQDGAGVSTLAPVAVTGAYDMAATEGSGSYTSGVVTIGKGK
QSVKDIPQSVTVVTRQRMDDQNATSLDDVLANSTGMTLYKSPMGGNYVFSRGFRVDTYQFDGVNREFYYPQANSFTSSTV
ILDRVEIVRGANGLLQGAGSPSASVNLVRKRPLAENQLQLTTSAGSWDNYRADIDATGPLNESGTLRGRAVASYNDRDYF
YDVAKSRNTVLYGVLSYDIAPSTTITGGVSHEDLRSTPFFHGLPHYTNGDDIGLKRSTSFAQHWNRWNGKQTSAFVELAH
RFNQDWSVKLTGNSTQESNDSKYAFTEGAVNPLTGSGPTMYAGIFDFSTHNKALNLDIDGVFDALGRKHSVSFGASVNHL
TSKNDFATARLGRGLDIWNPDHDVPEPTDAWLRENAYRGDATIIKMKQTGVYGVGRFSLADPLTLVAGARVSWYENTARY
RDSGDRYTDPYKENGVVTPYGGLIYAFNPQWSGYVSYAEIFEPQNALDATGKLLDPMVGKNYELGVKGELMGGRVNTSIA
VFRIDQKNRAQQDLAGICSVGDVCYISSGKVRSQGVEAEISGEVLPGWQVFAGYTFNSLKFLDDTSVSNTNFGRTFTPKH
MLRLWSDYRLPGELSAWTLGAGVNYQSGSYTETRGVRVSQSPYAVWNARVSYKINKNWTAALNVNNVFDKTYYQTIGAPG
WGSFYGDPRNATLTLRGTF
>AHV91328.1 glycine-zipper containing OmpA-like membrane domain protein [Bordetella holmesii ATCC 51541]
MREQISKRVAVVGVMGALLLAGCATPQQTNTAVGTGAGAAVGAGVGALVGHGKGAAIGAGIGAVAGGLIGYNWKTVKDDV
QQSAASSLGVDVVEMPDGSLKVSIPSNVSFDTGRATLKPALLPVLDSVAKSVEQHPELRVKTVGHTDNTGSVATNQKLSQ
ARAQAVATYLSRHGVAASRIMVEGRAATDPIGDNSTVDGRAANRRVEIYLYAVKQ
>AHV91329.1 nitroreductase family protein [Bordetella holmesii ATCC 51541]
MSNAYIDALKQRRTQYALGRNVSLSKEALVNLIQEAIKHSPSSFNSQTSRAVVLFGAESEKLWALAADEVRKVAPADGFE
ITEAKLKSFAAGVGTVLFFEDQDVVRGLQEKFALYADNFPVWSEQSSGMAQLSVWSALASAGVGASLQHYNPLIDDAVAR
EWKVPASWKLRAQMPFGSNESGQTEKAFMNDADRFIVVG
>AHV91330.1 hypothetical protein D560_0114 [Bordetella holmesii ATCC 51541]
MRIDYTGVGLIGHLYAALQSRQPGYACMGAAERLFKASQDSTGPILIATGFPEGGGAPETDGPIGAALMARAFFLGLRRE
TVIVIDEDWEEMMVATCRGAGLAPMPFPADGVIKPLDFLRPVYIKTVPKDDKGAHAICDDLIAVTRPCAAIAIERPGRNA
KGLYHGLGGRPLDGLVANLDYLFDKVKGAGIPFIGIGDGGNELGMGVIAEDLPRFSPKAADTGTPGRGGVAAVTAADWLV
VANISNFGATGVVAALAALLENPVVFHEPELETRSTQLCVASGGVDGMFMAPEPAHDGIAMQEYAGMVQALHGSVMRALG
HSVNWQGHRGDWRQLK
>AHV91331.1 lipopolysaccharide heptosyltransferase I [Bordetella holmesii ATCC 51541]
MPTRILIVRTSSLGDLVHMLPAISDIARHVPDAQIDWIAEEAFAEIPGWHPAVRHVIKVAHRRWRKAWWSEQVRAERKAL
AERLRSEPYDIVLDMQALLKSAWLVRQTRGVRHGLDWRSAREPLASLFYNVRHRVEFWQPAVIRQRKLAAQTFGYTYGGA
PDFGLQGFFSQPASPPAPEAGRRLHHVDNDRGYAVIMPSASREDKLWPEDDWRAVFRRLQEAGCTLRLLAGNDQEAQRAR
LLVAGMEGVEVLPRMDLTSVARVLAGSRLMVGLDSGLTHLSAALGRPTIGIYRASTPVRTPLVGSNYTASLGDRGAAPSR
EAVMAAVEQALAAR
>AHV91332.1 regulator [Bordetella holmesii ATCC 51541]
MTVVALTDSPLSPVATGALHTLCFTAAKQADNAATHSGQGSFFHTTAGLLGLAEHVIARVATLGGPQALQRLSDVEARLA
EEHVYWAPTRRTAAG
>AHV91333.1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region family protein [Bordetella holmesii ATCC 51541]
MGAYLPQDQWDVPLGYEAYAAISAMVGHGGVVAFDDSVDMARMARYAMEFCAAESCGKCTPCRIGSTRGVETLDRIIAGG
PARQAQVHLLRDLCDTMLGGSLCALGGMAPYPVLSALNHFPEDFGHTPLAA
>AHV91334.1 ATP phosphoribosyltransferase [Bordetella holmesii ATCC 51541]
MSIAPAPLTLALSKGRIFEETMPLLAEAGIEVGESPESSRKLILPTSDPGLRLIIVRASDVPTYVQYGAADFGIAGKDVL
IEHAAGQAGRLYQPIDLDIAKCRLSVAVRQDFDYSAAVHQGARLRVATKYVQSAREHFAKKGVYVDIIKLYGSMELAPLV
GLADAIVDLISTGGTLRANGLREVEAIMPISSRLIVNQASLKTRRDRLQPLLDAFERASTRQD
>AHV91335.1 hypothetical protein D560_1319 [Bordetella holmesii ATCC 51541]
MLSMAVMAGAQAADVEPSRAQVQAELAQAKTDGQYTFGEEAYPAAIVQHGSLSSAQVQDQLAQAQSEGLVTTANLDYPPV
AATVDSHVSRAQVRSDLAQAKAEGLVTYGNLDYPPLNG
>AHV91336.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MVSSVILGMLCLHLFCFCLMFRLISARLHCKKKVHRGIAWSRA
>AHV91337.1 acetate kinase [Bordetella holmesii ATCC 51541]
MNSQNTILVINAGSSSIKFYLYGISEARELSPILGGQLEGIGTQHSRLVVRDAHGQTMTDRQIAPRHAADVRDAQEVVGT
WLSGHLSGSPLAVGHRVVHGGPDLHTPVLVDDAIIDKLKSYTSLAPLHQPNNLAPIQVIRERLPALPQVACFDTAFHRTH
SAVADRYAVPETMYQEGVHRYGFHGLSYEYVAQRLQRALPDLKGGKIVAAHLGSGVSACAMLDGKSMDSTMGFTALEGLP
MGTRPGRLDPGIGLWLMERGMSHDEIQHFLYHECGLKGLSGIGNDMRELEASDAPAARLALDYFAWRVAEGMVGLGCAMN
GIDAFIFTAGIGENSASMRARIARHWEWLGVHIDDERNKGHGPRISTEDSKIGVYVVRTNEELIIAQHTLDLVSAR
>AHV91338.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MQCIRPKGNRARGWLAAFFALALTCSAQAAPWPAQQPIRLIVPAAPGGSLDILSRPLATQLGAILGQTVIVENRGGAGGM
LGADYAAKATPDGYTFLMGTVHHAIGATVNPNLMFKPERELVGVASIGTTPNVVIINNKIPVNTPQQLVAWMKRKSDSAN
YATGGPGTLQHLSMEWFKAITGVKAVAVHYRGSAPAMSDLLGGQVDLMFETMPLALAQTRSGAVRAIAVTSQARAPALPD
LPTLDETVAPGFAVSSWYGVMAPTGTPPALMDRMHDAIEQALQTPELKKVWEGAGVQPQPMSRTQFQNFWLEDIQRWGKI
ARENGIRLE
>AHV91339.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MTLQTTPALRATGLVRRFGALLATDNVNLTLEPGEIHALIDPNGAGKSTLIHLLSGTLATDAGTLMVGDTDLTSFSAHER
VASGLSRSYQITNIFRAFTVRENLLLAVQAHAGSSFRFWRPRQAEPGLQEAANALALQCAIDASLMDRQAGTLPHGEQRK
LEFALALAAKPRVLLLDEPMAGMGPDETLRLTELIESLRGQAAMLLVEHDMQAVFRLADRISVLVYGRIIATGTPDEIRA
NAEVRQAYLGDDGEHAQERTC
>AHV91340.1 cysteine dioxygenase type I family protein [Bordetella holmesii ATCC 51541]
MPAKYLDFSRRFTALIDAAASDEQRILDRGAAMLAELIAVDDWLPEAFAQPHPRYYQQYLLHADPQDRFSVVSFVWGPGQ
TTPIYDHTVWAIIGVLRGAECSEMFSPGKVGQPMVAGPTQTLRARSIETLSPAVGDIHRVSNAFVDQVSISIHVYGGNIG
KISRHVFNPQTSEPKAFVSGYCNAP
>AHV91341.1 ribosomal protein L20 [Bordetella holmesii ATCC 51541]
MPRVKRGVTARARHKKVISAAKGYRGRRGNVFRIAKQAVMRAGQYAYRDRRNKKRTFRALWITRINAAVCEQGLSYSVFI
AGLKKAAIELDRKVLADLAVRDKAGFAAIVQQAKAALAA
>AHV91342.1 putative 3'-5' exonuclease related to the exonuclease domain of PolB family protein [Bordetella holmesii ATCC 51541]
MTPTLVFDLETLPDVVGLRRLHGWGPDVSDLEVAERAFAARREAVGHDFLPLHLQRVAVVGCVFRDDQGFRVKTLGQPDD
PEAALLAGFFKTIERYTPKLVSWNGSGFDLPVLHYRSLIHGVPAPRYWDWGDEDRDFKYNNYLSRYHTRHLDLMDVLAKY
NGRANAPLDELAKLCGFPGKLGMDGSKVWEAWNQGQADAVRAYCETDVVNTWLVYCRFRFLRGELDHASYDAEIALVRDT
LAASDAPHWKEYLAAWDAN
>AHV91343.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MSAGLRVFLFFSLGYLVSYLFRGLNIGFGPTLSAELGLSAADLGTLTSLYFLGFALLQIPAGVLLDTWGPRRVNAALLVV
AAVGTLVYGLSQGLPGLMVGRLLIGAGVSVCLGAAFQALALNYPLARLPLINGLVMAVGGLGGVLVGSPLSWLLNFSTWR
EVSIGMVVVTLCVAALLWFGAPREPARDRPHASLGEQLRGTFVLLRTAHYWRLVSLPVATGGVFYGVQSLWVRPYLTDVN
MLPAAPAAALVSLLGFAMMGGNVGLGAMARRVERMGLGLYGFSGVCLALFILIQLLIVLRAPVPLALLWAGYGVFGSANI
LVFALLAGEFPRELLGRVAATTNLLTFVSIFVCQVTFGWIVELWPRGDAVYEPGSYPAGGYLAAWGAFLALQIAVALYYF
WPRRRAASARQGA
>AHV91344.1 fecR family protein [Bordetella holmesii ATCC 51541]
MPADTTPSARELRAVKDAATWYARLSSEAVTANDRHAWSHWLASDAAHRSAWGKVEQVCRQMGRLPGSIARPTLAPANAP
RRAVLRSIGLVAGASAASWLGWRTVSREGWTADYRSAVGERRNIQLADGSSMLMDTDTAVDVSFDAHARILDLRQGAILV
STHPDSAATPRPFLVRTRQGTATALGTRYTVKTEDGWTRVAVLEKSVRLEPAQGQDAFVLHAGEQARFSRDTIDLPKPND
ITTVSWIGGNLAALDMPLGQLAAELGRYRRGGLGCDADVALLLVSGSFPLDNTDQALAALTQSFPVKTTRVLGYWTRLVA
R
>AHV91345.1 riboflavin biosynthesis protein RibF [Bordetella holmesii ATCC 51541]
MLRIHHHLPPPGQRPPCALTIGNFDGVHRGHQAILARVREAAQTRGLTPAVMTFEPHPREYFAQRHQRPELSPTRISGLR
DKVASLACAGIEQVLIEPFDARLAEMSANAFIEDLLVDGLQTRWLLVGEDFRFGHKRSGDIDLLREAGLAHGFEVATLAD
VTNSHGHRISSSEVRTALAVGDLARAEHLLGHPFHISGHVIHGRKLGRQLGFPTMNLRVAPRCAARSGIYVVRVQGLGPQ
PMAAVASLGVRPSVEDAGRVLLEVHLLDESLDAYGKLINVEFLHKLRDEEKFSDLPSLTAAIAEDARNARAYFAVHGL
>AHV91346.1 hypothetical protein D560_3700 [Bordetella holmesii ATCC 51541]
MKKTLLSLPLAISALTTFPALAEPTDLGAGFALSGNAAIVSDYRFRGYSQTDFRPAAQVGFDLTHSSGFYLGNWNSNVSN
FVFTDGNLEMDFYGGWKGDLGNGLGLDVGALHYYYPGSSSPKGGNYNNTDLYVGLSYGNYSLKYSYTPSDFFSTPDSKGT
WYLDGTANFDLGDGWGLVGHVGYQKLKNQVNMNGDAMGHYVDYKVGVTKDIKGWVFGVAAVGASKDNWLPTKYGHPSGRL
GAVFSVARSF
>AHV91347.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MKPTAYLVTGASNGIGAAIARSLLDAGHTVVNIDYRLPDAAPAGLVSFQADLTDAAQTEAVAREVTDRYAIVGLVNNAGA
TRPGSADTATLADLDYVVSLHLRTALILIQAALPAMREAGFGRIVNMSSRAALGKPDRVVYSATKAGLLGMTRTLAMELG
GDGITVNAIGPGPIATDLFTKSNPAGAPKTQRIIDSIVVKRLGTPEDVARAAMFFLSPDNGFVTGQVLYVCGGTTLGVAP
V
>AHV91348.1 phenylacetic acid degradation protein PaaD [Bordetella holmesii ATCC 51541]
MDAPQIQTTVPTDPQALAEAVGQTMYAADAATQALGMTVVEIAPGYARLTMTVRGDMLNGHKTCHGGFIFALADSSFAFA
CNSRNVSTVASGCVIDYLAPGYEGDVLTAVAQERSLAGRTGVYDITVSNQDGRNVAVFRGRSYRIKGQIVGEAEA
>AHV91349.1 putative transcriptional regulator [Bordetella holmesii ATCC 51541]
MNRTLDVIFLIKDDATHEEQLDSLSRLGFRVRVCHDLAGLYEHYGRQPCPLVALCAPLADLHIAAVRLRATDRSVGIIAL
ARFADSEARVRTLLCGADACLDRDASGLELAAVLQSLLRRIAGLAALPMPLEERAETAVDAEPEVASLAGWPGTVAKWRL
ANQGWTLVNPAGRGIGLTTGERAFMTRLMTAPERKLSRDALQPEDVGAESPTQRSRFVDVMVSRLRRKAALQQMALPIRA
VHGWGYMFAGEVDATAADPN
>AHV91350.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MNRTAPARMGLSIIDLMTGTTAAMGLLAGVLGARASGQGRDIDVSLFDVALHNLAYVATWYLNAGKAIGREPRSGHPSLT
PSQLYKTRDGWIFLMCNKEKFFGVLAECIGKPEWISAPHYKTFKDRLANRERLTEELDAVLQQEDTAEWMRRFAGKVPAA
PVYDVQQALDSDFVREQERVLDFAHPEGDVRMVASPVRAGPHPVNPAPSMGAHTDELLRELGYDAENIDQLRQRSVI
>AHV91351.1 aspartate racemase family protein [Bordetella holmesii ATCC 51541]
MGPLAGAAFAMRLAALTPASIDQQHIPALLLNDPRIPDRSTARLYGGADPWPAMLRGIRTLNNAGAKLIAVPCNTAHLWY
EQMAQASECEVLHIIEAVAQDLKRQGITRGRVGLMGTAATLGLGLYQQTLEKHGYTCIVPTEEEIDTLCMASIRAVKGNQ
VEESFAPAAECIERLRTRGADAVVLGCTELPLAVPHALRKDLGIPLTDSIDALALAAIAHFQPHHLEAEALSA
>AHV91352.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MTARRVWFERVHKAAGYTALTLSAITVLLGMWVADAPRWMWLGLSIWWSAFVYTFVWLQRHGRCLDTYQAIWGRS
>AHV91353.1 bifunctional protein RfaE, domain II [Bordetella holmesii ATCC 51541]
MSQARFESKIYARADLVAAVAAGKLPRPLVFTNGVFDLLHRGHATYLDAAARLGASLIVAVNTDSSVRRLGKGDERPLNT
EADRAALLAALQCVDAVTAFGEDTPEALIAELRPDIIVKGGDYDMDKLPESALVRSWGGEAVAIPFQFERSTTNLVRKIR
GT
>AHV91354.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MTATIGKPAPQFTAESTIGPINLEQCQGRAVILYFYPKDSTPGCTTESQDFRDLHADFLAASAIVIGISRDSIKSHENFK
AKYALPFPLISDADETVCNLYGVIKQKNMYGKQVRGIERSTFLIDAYGVLVQEWRGVKVPGHAKEVLQAAKSIG
>AHV91355.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MNLPGLNFDLGEDLEMLRDAVRSFALSEIAPRAAEIDRNDQFPMDLWRKFGELGVLGMTVSEEYGGTSLGYLAHMIVMEE
ITRASAWVGLSYGAHSNLCVNQIYRNGTNDQKARYLPKLISGEHVGALAMSEPGAGSDVVSMRLRAEKKGDRYVLNGNKM
WITNGPDADTLVVYAKTDPQAHQRGITAFLVEKSFKGFSVAQKLDKLGMRGSHTGELVFQDCEVPQENILGQLNGGVKVL
MSGLDYERAVLSGGPLGIMQAVMDVAVPYVHDRKQFGQAIGEFQLIQGKMADMYTMLQASRAFCYTVGKNLDRLGREHVR
QVRKDCAALILYTAERATWMAGEGIQLLGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGRELFNETT
>AHV91356.1 polysaccharide deacetylase domain protein [Bordetella holmesii ATCC 51541]
MELPVEWIRDDAVYFVMHRFQSLRPYTPPQSVLDIFMRELEGAHADGGLFQLTMHPHVITARSRIWILEEILKAARAKGA
WIATHAEVVRHVKANAQ
>AHV91357.1 succinate dehydrogenase, cytochrome b556 subunit [Bordetella holmesii ATCC 51541]
MSDSAAKPRPQFRNISIPQILSYRLPLAGKLSILHRVSGALLFLCLPLVIVPLFAASVTSAESFAQVAQYAGNPLVKLVL
LVLIWGYLHHFCAGIRYLILDLHIGIDKESGRKSAAIVFAVSLVLTLVFALKLFGVL
>AHV91358.1 lysE type translocator family protein [Bordetella holmesii ATCC 51541]
MDTALVLRTAATEGPRRAFMAAVGICAGCLAWGAAAAFGLGALLSASRLAYDLIRIAGAIYLLYLGAGMLWRARLARGVT
GLGQAAKNKVHRGIAWSRA
>AHV91359.1 ribosomal protein L2 [Bordetella holmesii ATCC 51541]
MVKVVSPKLHKGAPHAALLEKKTRGSGRNNNGHITIRHRGGGHKQHYRVVDFRRNKDGIPAKVERLEYDPNRTAHIALLC
YADGERRYIIAPRGVEVGATLISGVEAPIRAGNTLPIRNIPVGTTIHCVEMIPGKGAQMVRSAGASAVLMAREGTYAQVR
LRSGEVRRVHIECRATIGEVGNEEHSLRQIGKAGAMRWRGIRPTVRGVAMNPIDHPHGGGEGRTGEAREPVSPWGTPSKG
FKTRRNKRTNNMIVQRRKRK
>AHV91360.1 FAD linked oxidase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSLTVVTADGRIVRTAGRARKSSAGYDLTHIFVGSEGTLGIITEVTIRLYPQPEAVSAAICNFPTLDDAVQSVIEIIQMG
VPVARVEFMDAAAVKAVNLHSKLSLRETPMLVFEFHGSPAGVQEQAETVQAITAEHSGMDFEWAERPEDRNRLWTARHNA
YFAGLQLRPGCRASTTDVCVPISRLADCVRETVDELDRASFPYTIVGHVGDGNFHVLMLLDGENETEWQ
>AHV91361.1 efflux transporter, RND family, MFP subunit [Bordetella holmesii ATCC 51541]
MDFSLKAGSWRWLAALLIVAVAAAWVWRDDSPSGATGSPQQAVPVEVVLARAAPLRLQLHAIGTVTPLAHVVLRPQVSGQ
LLRVHYHEGQSVQAGQLLAEVDPRPYEHALQAAQGKLDQTRARLDNARADLIRYAALGRQRAVAHSVLDAARSNVEQAQG
QLAAEQAGVDETRRQLALTRITAPITGRVGLRHIDAGNHVRANDATGLTTLVQTGATSVLFTLSEARLPAVREALARSPA
LDVEA
>AHV91362.1 potassium-transporting ATPase B chain domain protein [Bordetella holmesii ATCC 51541]
MANSPTPCPPRPACRLQAPPCRRPRRIARSACGRARWPAPPCATPCANCRRPPSCATPSCSSSTPAAS
>AHV91363.1 outer membrane porin protein [Bordetella holmesii ATCC 51541]
MKKTLLAAALLAGFAGVAQAETSVTLYGIIDTGIGYNKLKGSNYDSSRVGMINGVQNGSRWGLRGTEDLGDGLQAVFQLE
SGFDSGNGQSGQGSRLFGRQATIGLQSNSWGRLDFGRQTNIASKYFGSIDPFGAGFGQANIGVGLSSANTVRYDNMVMYQ
TPSFSGFQFGVGYSFSADDTKTDKDGFVNGVYTKNGAPGQTGFATADNTRAITTGLRYTNGPLNVALSYDQLNASNKLPN
AQTNATPRAYAIGGSYDFEVVKLALAYGRTTDGWFTGQALPSGSTLFGFTSNVFADGFKANSYMVGLSAPIGGASNVFGS
WQMVDPSNNKLTNVKGADETMNVFSLGYTYDLSKRTNLYAYASYAKDYAFIDGVKSTAVGVGLRHRF
>AHV91364.1 hypothetical protein D560_0494 [Bordetella holmesii ATCC 51541]
MRHHQCCACNECRSNELQHGYSPDSASRRLVAALVVNEPPVAAMRVFTRWDA
>AHV91365.1 tetratricopeptide repeat family protein [Bordetella holmesii ATCC 51541]
MTDSTSDLHQRASQAFSSGDYAQAADLLSAALQRAPDDASLLSAAGYALARLGRLAEAADRFDAAVRLRPADVALLRDAG
SVNRKAARLEAALGHFRAAYRLLGNDVALLGQIIAVMQQLGRADQALVLIDGTLALAPQSAALHYLRGVALSALGRRAGE
RQAYETALRFDARLVDAHTNLGVLARDELRLQDALRHFKQALAIDPDNAGARNNRAQTNLLAGRYAHGWRDYEWRWRDGV
QTMPFEGAPWLGEPSLAGKTLLVHAEQGLGDTLQFSRYVPSVAAQAARVVLQVQPALQALLQANLPEVTVLAVGDVLPPH
DHHVPLLSLPLALASQRAEPWPLARPMQAESSRTAAWAARLDGVFDGPRRPRIGLSWSGNAAHPDDRNRSIPFSQLAALL
DVACDFVCVQKDVRESDRQAIDAWRGQGSAGRLYVPALDDVSDTAALMANLDRVISVDTAAAHLAGSMGLPTWILLPAMP
DWRWQLQRADTPWYGSVELWRSTQQGWPVLIEALRQRLPAPA
>AHV91366.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MKPATIVGAILIVLGAAGLIYKGFNYNSEETVLQIGSVKATAETEKSVAIPTWASVAALVVGVLVIGAGMRR
>AHV91367.1 FAD dependent oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MISAAGQRANLAKAAGLLGSDLPVQGGSLPGWAGWRAVLPGRSPTIGGLLQAPGVMLATGYASRGLSWSALAGDIIAARL
CAEPAPLERDLLAAIAPR
>AHV91368.1 polyprenyl synthetase family protein [Bordetella holmesii ATCC 51541]
MKAVDAVIRERLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQGMHHQLLAAVVEFIHTATLLHDDVVDESDLR
RGRQTANAVFGNAASVLVGDYLYSRSFEMMVEAGSMRIMQILSEATTVIAEGEVLQLLNVHDPDVSEERYLQVVRYKTAK
LFEAAAQVGAVLAGATPEQESAAAAYGRHVGTAFQLIDDVLDYTGDAVALGKNVGDDLREGKPTLPLIRVMEVGTPAQQD
LIRKAIETGDADFAAVALAIQETDALAHARQAAEAEAQKARDALSVYPVSIYQNSLLEFCAFAVNRDH
>AHV91369.1 filamentous hemagglutinin transporter protein fhaC [Bordetella holmesii ATCC 51541]
MAQSSHPLFAPNGQQPLTPGQRDLDFEHNRLQRAQQQRQIDRALSQPPGSTIEAPETTPAPDLTRPGHTVAVSGVDLDFG
TQPVLFDAQTLAREFLHRPLDNQGLFNLVRLLTARLYELGYVTSNIALLEPALKNGRLQLKVNWGRIKGWRINGKPLQTL
RDRAMVGWAIPNWWRSPLNIRDLDQAIENMNNGLKQVTVTIAPAEEYGYSYLDLRVERAAWARFSIGADNSGLGTPQQGR
DKYSLSVGTGDLLGISDSLNLFASRRYFSDAGSDGEQSYDLSYRIPLGYTRIDLQAGYSSYKNLLRAHRLAYQSAGNSRN
VSLRITRTVYRDATSQFSLYGALKSRQNKNYLAQTRLDVSSKHYSDGTLGLQWSVQRGRQAMFADLSWNRGLGLNNGQYS
AFDAVNARGYASRVNAIVSWQGSFAPGGQALRVQSQLGFQYSRQILLNSYQLTLGDEYTVHGFSRMTSQSGDKGVYWSNT
VSLPVRWPRLAGVSLTPFAGLDVGRLQNNQDTAAVSMAGWALGVRLSSPYWNLSATYARAMWSPLPKKPLWYLSTSFVF
>AHV91370.1 flagellar motor switch protein FliM [Bordetella holmesii ATCC 51541]
MAYEAFLSQDEVDALLAGVTGESDAKQGQANQADNTRAYDLSFPDRVVRRRMQTLELINERFARNMRHVLLNFMRRSADI
TVGSIKILKYADFERNLPVPSNLNMIQMKPLRGTALFTYDPSLVFLVIDSLFGGDGRYHTRVEGRDFTTTEQRIIRRLLN
LTLDSYGKSWDPVYPIEFEYVRSEMHTKFASITGDNEVVVVSSFHIEFGATGGDLNICLPYSMIEPVRDLLTRPLQDAAL
EEVDQRWSQQLSRQVRSADVDLVAEFAHIPSTIGALSQLKVGDILPVEVPHSVVAHVDGVPLMECSYGVFNGQYALRVHN
MLNHDEPNETPDHD
>AHV91371.1 arylformamidase [Bordetella holmesii ATCC 51541]
MKRIWDISPPISAQSPVFPGDTPYSQHWKWQISPQCPVNVSEIAMSPHIGAHADAPLHYADGAAAIGSLPLEPFLGPCRV
IHALDCGPLILPEHLAHAADDLPARVLVRTAQHAAVHWWTDDFSAYAPQTIEWLAGRGVTLIGIDTPSIDPASSKTLGSH
HTILRRDIRALENLVLDAVAPGDYELIALPLALVQADASPVRAILRELG
>AHV91372.1 polyprenyl synthetase family protein [Bordetella holmesii ATCC 51541]
MKQPHLACADWLRDRADHIEQVLEELIPAADVAPARLHDAMRYAVLGGGKRVRAALVYAAGQACPVSGNMLAIEASMDRA
AAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFELLAGMPIAPALVVQATQVLGRAAGSL
GMAGGQAIDLHSVGKTLSRDELQTMHSMKTGALLAASVALGGIVAGASSAARQALDNYAQAMGLAFQVVDDILDVTADSA
SLGKTAGKDAVENKPTYVSLLGLDQARELAEELRQAALLALGPLGESGARLAQIADFIVLRDR
>AHV91373.1 efflux transporter, RND family, MFP subunit [Bordetella holmesii ATCC 51541]
MNARKTLPLAILAVVALLGYYGWRNINDRGPGEGFVSGNGRIEATEIDVATKLAGRVDDVLVNEGAFVQAGQPLARMQID
TLTAQHAEARAQHQQAINAAASARAQVALRRSDKQAAQAVVVQRESELDAARRRLARSQTLSKEGASSIQELDDDRARVR
SAEAAVAAARAQVAAADAAIQAAQAEEVGAGSAIDAAQATVARVQADIADSELRAPRAGRVQYRVAQPGEVLGAGGKVLN
LVDLSDVYLTFFLPEQAAGKVGLGTEVRLVLDAAPQFVIPASVSYVASTAQFTPKTVETASERQKLMFRVRAQISPELLQ
RHLTQVKTGLPGVAWIKLDPDTGWPANLQVKVP
>AHV91374.1 putative dihydrodipicoline synthase related protein [Bordetella holmesii ATCC 51541]
MSKIFSGLFVVAQTPFTDDGSLDLPSVDTLCDFYLEHGAAGLTVLGVAGEAAKLSMEESIATVRRYVARANGKPVIAGVS
NPSVAQLATLTKEVMEAGAYGVMIAPASGLKTEEEILNYFAAVFARIGDVPTVLQDFPFSTGVWMSVPTIARLIERFPQI
QAIKEEDIPSAAKITRIRAALVRPVPILTGNNGVFLLQELAHGIEGPMAGFSYPEMLSGVHDLYSAGKVEEAHDLFDTYL
PLLSFENQSQWGVAVRKEVLKRRGAISSAAMRAPGPALTQADLKDIDVLVRRVEKAIAKRA
>AHV91375.1 GXGXG motif family protein [Bordetella holmesii ATCC 51541]
MSHTPQKESCRPVAAVAIDASRIGLPAAQGLYSPLNEHDACGVGFVAHIKGRKSHAIILQGLKILENLDHRGAVGADKLM
GDGAGILIQIPDTLYRDEMTQQGVTLPPPGEYGVAMVFLPKETASRLACEQELERSVRAEGQIVLGWRDVPVDRDMPMSP
TVRDCEPVIRQLFIGRGADVMVPDALERKLYVIRKTASHAIQNMRLAHGKEYFVPSASVRTVVYKGLLLADQVGRYYRDL
ADPRTVSALALVHQRFSTNTFPAWPLAHPYRMIAHNGEINTVKGNFNWLRAREGMMQSAVLGDDLKKLYPIVYEGQSDTA
TFDNCLELLVNSGYSLAHAMMMMIPEAWEQHTQMDQSRRAFYEYHAAMMEPWDGPAAVAFTDGRQIGATLDRNGLRPARY
LVTDDDMVIMASEAGTLSIPENRIVKKWRLQPGKMFLIDLEQGRIIDDSEIKSQLANSRPYRQWIERLQIKLESLPAPRS
NSPATQTPVSLLDRQQAFGWTQEDYKFILEPMANTGEEVIGSMGNDAPLAVLSNRAKPFFNYFRQLFAQVTNPPIDPIRE
QMVMSLVSFIGPKPNLLDINNVNPPLRLEVSQPVLDFAAMAQIRDIDQVTGQKFRSYELDITYPAAWGSEGIEARVAALC
ARAVDAVQSGYNILIVSDRLVDSERVAIPALLATSAVHQHLIRAGLRTNTGLVVETGSAREVHHFALLGGYGAEAVHPYL
ALESLGRMSSPEKAVKNYIKAVGKGLNKVMSKMGISTFMSYCGAQIFEAVGLQRELVEKYFTGTASNIEGIGIFQVAEEA
LRMHRAAFSADPVLENALDAGGEYAFRVRGEEHMWTPDSIAKLQHASRSNNYRTYKEYAQIINDQSRRHMTLRGLFEFRV
DPARAISLDEVEPAKDIVRRFATGAMSLGSISTEAHSVLAVAMNRIGGKSNTGEGGEDELRYRAEMRKGKSTIKDGDTLA
SLLGSDRIEADVPLKKGDSLRSRIKQVASGRFGVSAEYLSSADQIQIKMAQGAKPGEGGQLPGHKVSEYIAKLRYSVPGV
GLISPPPHHDSYSIEDLAQLIHDLKNVNSRASISVKLVSEVGVGTVAAGVAKAKADHVVIAGHDGGTGASPVSSIKHVGT
PWELGLAETQQTLVLNRLRSRIRVQADGQMKTGRDVIIGALLGADEFGFATAPLVVEGCIMMRKCHLNTCPVGVATQDPE
LRKKFQGKPEHVVNYFFFVAEEVREIMAQLGIRKFEDLIGRTDLLDMRTGVEHWKARGLDFQRVFHRVNSDSAVRHVEEQ
DHGLAGALDHQLIERARPAIERGEKVSFIVPVRNRNRTIGAMLSGAVAARYGHDGLPDDTIHIQCNGTAGQSFGAFLAHG
ITMDLVGEGNDYVGKGLSGGRIIVRSPNDFRGFGPDHIIAGNTVMYGALAGEAFFNGVAGERFAVRNSGAATVVEGTGDH
GCEYMTGGTVIVLGETGRNFAAGMSGGVAYVWDPDGTFKHRCNLSMVELEAVVPHTEQQALGNIEIWHSAQRGGERETDE
TILRRLVEDHFRYTGSYRAREVLGDWEASRGKFVKVMPTEYRRALGEMWRAANPQQMAA
>AHV91376.1 beta-ketoacyl-acyl-carrier-protein synthase II [Bordetella holmesii ATCC 51541]
MKRRVVITGLGIVSPVGNDLATAWDNIVNGRSGIGRISRFDPSALTTHIAGEVKGFDVTQYVQPKEARQMDTFIHYGVAA
GVQAWRDSGLEATEENADRIGVIVGSGIGGLPRIEETQTDLLAKGPRRISPFFVPGSLINLISGHLSIMFGLKGPSYAVV
SACTTGLHSIGDAARLIEYGDADVMIAGGAESTVSPLGIGGFAAMRALSTRNDDPTTASRPWDRDRDGFVLGEGAGVLVL
EEYEHAKKRGARIYGEFVGYGMSSDAHHITAPDKDGPRRGIVNALRNGAINAADVDYVNAHGTSTPLGDKNETDALKLAF
GDHARKLVVNSTKSMTGHLLGAAGGIEAVFTTLALYNQVSPPTINIFNQDPECDLDYCANEARPMKINVALSNSFGFGGT
NGSMAIRRI
>AHV91377.1 ribosomal protein L30 [Bordetella holmesii ATCC 51541]
MAQKQIKITLVRSVIGTKQSHRDTVRGLGLRGLNSSRVLLDTPEVRGMIRKVDYLVSVSEA
>AHV91378.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91379.1 putative type IV pilus assembly protein [Bordetella holmesii ATCC 51541]
MRESWWLLRLDAWRFQRSRADYYAYLSALLRASDGRLALREVFANDAARYGRGHWRGRLALRWAKASGVYGGNLAALWAG
VAPAQDCLMLATAQAAGSAALAQGLQDLAQACQLAEAARKQLSASLRAVVVALAVLVGTVWAVPLFTVPHLAQVFGDLPY
EYHGPQTRLLFWFAAHVVWWGPLAAVGASTGLTLWVWSLANWRGRWRRHCYAIGPWRLYRDAQAIRFLSLLEVLIRDGAS
MDTRLRMALTALRQYATPWLAGHITHMLERVEAGQVDASTFDTGLFDRQLWWFMSDMIAAHGIEAGMSRARERIEQAWLP
RLAAQALFWRWVLLLSTVAAMLGLVLWHYGVIDELRHGLTHFYSAY
>AHV91380.1 NUDIX domain protein [Bordetella holmesii ATCC 51541]
MTDLSLPRVRRPIVRPNFDPKEQPWQVANSGLLRVSPELLTPDALRGSLRPARQWTLDPLGMEKERYPGREGPPVLAAVL
IPMVMRPQGVSVMLTQRAAHLHDHAGQISFPGGRVELADLTPVATALREAHEETGLPQDRVEVLNSMPEFLTSTGFSITP
VVSLVRPDFAPAADAFEVADIFEVPLDFLMDPSNHRLYEARLPDGRVRRYYAIPWGERFIWGATAGMLRNLYTSLASRPS
VSVG
>AHV91381.1 acrB/AcrD/AcrF family protein [Bordetella holmesii ATCC 51541]
MLDHMHEVAREVLPHTVVTDLDGQSREFRDSSGSIYLVFAMALAFIYLVLAAQFESWRNPFIIMLSVPLSMTGALLALWL
TGGTLSIYSQIGLITLVGLITKHGILIVEFANQLREEGHDVMHAVVQASVLRLRPILMTTGAMVLGTVPLALANGAGAES
RQQIGWVLVGGLSLGTLLTLFVVPVAYSLIVSTRPALRGKAAESTPVSE
>AHV91382.1 ribosomal protein L36 [Bordetella holmesii ATCC 51541]
MKVMASVKRICRNCKVIKRHGVVRVICTDPRHKQRQG
>AHV91383.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MLEIRHLETLSAIRDGGSLQEAAERLHLTQSALSHQLRDLETRLGTPLLNRRTRPARLTTAGLRVLALADEVLPRLRATE
RDLMRLAAGRTGRLHLAIDCHSCFQWLMPTLDVFRAQWPDVTLDLSAAFSFAPLPALVRGDLDLVITSDPQELEAVQYLP
LFRYELVLAVSANSPLADLRHVAPEHLADQTLITYPVDRQRLDIFTAFLDPADVEPAALRRAELTPMIVQLVNSQRGVAA
LPNWAVSEYVAHSP
>AHV91384.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MSTVLDGIKVLELCEVFQGPLAGQILGDYGADVLKIERPGRGDSLRHSDTVANAQGTMGSYFGAVNRNKRSVCLDLKSPT
DQQIFRRLLQEADVLMHNYRPGVLERLGFGYQEVQRINPRLVYAEASGFGQTGPLAGMAGQDFLIQSISGIAWKTTASAG
APTFINVPIADFTSGLLLAQGILLALMERHTSGRGKQVNVSLFGALMAMQSLEAATALNYRYETRWFERALNFTAQASDG
WLTVIGFFRDNPLQLICQGLGIEDLSVTPGWEDKYGQAAGKEEIARMLQPHFLPLTVQQSVEKLQGAGVLAAPILDFDQA
LAHPQTEANELIATVPVAGQQDMRFVGSPIRLSRTPATIRRGPPTLDADRADVFAEEENA
>AHV91385.1 bacterial-like globin family protein [Bordetella holmesii ATCC 51541]
MSQTPLCTEEEIQTLVHEFYARVRADARLGPIFNAHIDDWDAHLSKLTDFWSAILLRTRRFSGTPMPKHIALPDLSAELF
EHWLALFRATARAQPNQAMATQALAMAERIAQSLWLGYQLSRQPDVAPQALRFS
>AHV91386.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MVDIQTLGVVGAGAMGRGIVQIAAQAGLDVRLYDTNAEAVAAARDALAQTWDKLVQKGKLSADAAQAALGHVLPAHALAE
LADCQLVVEAIVERLDVKRDLFAQLESIVSADCILASNTSSLSITAIAAACQHPERVVGFHFFNPVPLMKVVEVIDGLRS
APATGDALAALARRMGHTSVRAKDMPGFIVNHAGRGMNTEGLRAAQEAVASFDQIDAIMREQAGFRMGPFELLDLTALDV
SHPVMESIYRQFFDEPRFRPSPITTVRLAGGLLGRKVGEGFYVYKDGQKQVPAEPAVPPLPAGLRVWVSPAHAEGQARAQ
ALLRQLGVEPVQADTAPADALLVVTPLGEDVSTCVASQRLDGARVVGLDVLNDFAASRRRTIMTSPATEPRWRDAAHALF
ANDAVAVSVIDDSPGFIAQRIVATIVNIACDIAQQRIATPEDIDQAVHLGLGYPKGPLALGDSLGAARILEILRSMERVT
GDPRYRPSLWLQRRVQLGLPLTQA
>AHV91387.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MRNGIPNLSALQAFEASARLGSFSRAAEELSLTHSAVYRQVASLESRLGVQLFTRVRRRIVLTDQGAEYAGRIRHHLDQI
EKDTFGLVSRTGMGRSIHIAVVPTLATTWLIPRLADFQQAHADISVSLSVRTLPFQFKDHPFDGALYHGDGVWPGTKGVL
LFPERELVTVCAPGLLEGVGEQDAAALAGMTHLHLASRPDAWRQWYGANGHVYGPRYELFTMVMAAVQAGLGVGLMPRFL
AQPALDAGTLVMPAPQALQVSQGYYFGYPQHSERSGALKAFEVWLKATAAHEAARNP
>AHV91388.1 ABC transporter substrate binding family protein [Bordetella holmesii ATCC 51541]
MGALALAMAAGSAMAQQKSVAVTAIVEHPALDSVRDGVKEALKQAGYDANKTLKWQYQSAQGNTGTAAQIARKFVGDKPD
AIVAIATPSAQAVVAATKEVPVVYSAVTDPVAAQLVPSMAASGTNVTGVSDLLALDKQIELIKKVVPDAKRVGMVYNPGE
ANSVVVVKQLQELLPKAGMTLVEAAAPRTVDVASAARSLIGKVDVIYTNTDNNVVSAYEALVKVGNDAKIPLIASDTDSV
KRGAIAALGINYHNLGLQTGKIVVRILKGEKPGAIPSETSNKLELYVNPGAAAKQGVTLPEALVKSAAQVVK
>AHV91389.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MQLAQTLLSEIESGQYPVGSQLPTEYVLCEQFGVSRSTAREAVKRLVELGLVVRQPRIGTTVCARTVSSGYRQSVADVSD
LYQYASETTLVIEARETVEIDAERARALHATAGETWLHLRGRRHAGNPQEPICTTEIWIHPAFRSIQGMHGPLKGAVHAQ
IEQHFGEVIAAVEQEIRAIVLTNADALALNAQPHTAALLVTRKYRNRRNQLVELATSIHPADRFSYSTILRREWGVGMKD
R
>AHV91390.1 hypothetical protein D560_1405 [Bordetella holmesii ATCC 51541]
MKVPALKLLAFSYCVSGYIPLCEDAFRRILAIDPDFELKPAEIGHPVWGPAYQRAKQAA
>AHV91391.1 HAMP domain protein [Bordetella holmesii ATCC 51541]
MRLALIVGAISGLSLLGLLVWSTGNASRLARYYDVLLILNGVFALALFVWVVALTVRLARQIRRRMFGARLTARFALAFA
LIGVVPGALIYTLSVQFLSRSIESWFNVRVDSALEAGLNLGRAALDSQLADLDARARAMASELNNLPDADIPLALTRLRE
GNGVQEALVFTGSGRPLAFSTNKFGQLVPPTPPSTVLNQLKLARGYSAAEADDPGVAGAEDGLHLRVVIPLNTPVRFDSS
LAGAGEPRWLQLMQNVPEQIARNANRVQQGFRDYQELALSRLGLRKLYGITLTLALLLAVFAAIAVALSLSKRLVRPLLS
LAAGTQAVSVGDYRPLPEPPARDELGHLTRSFNAMTRQLDEARQMVESNRRQLERTNVYLESVLANLSSGVLAFDESFRV
TTVNQGAQNILQADLRSVIGRPLETADGMLAFAGIVREAFSAHEAVGSERQHWQQQFEITPGQAGGQPIILLARGTHLRV
DERGNGYLVVFDDITEVISANRTMAWGEVARRLAHEIKNPLTPIQLSAERLAMKLAAHLPPREAQMLERATNTIVNQVGS
LKQMVDDFREYARTPPAVMQPIDVNGLVADVLALYGWDPMDGQVRNGGPRLDVELAEGLPVIEGDSTQLRQVIHNLLANA
RDAVNEKGEDAQVKVLTQLTRIPHSDGSETAAVRFTVADNGPGFPPQVMQRAFEPYVTTKAHGTGLGLAIVRKIVEEHGG
RIDIANRKEGGARVSILLTRLASSSDTMGETLQQKHNADTQ
>AHV91392.1 putative exported domain protein [Bordetella holmesii ATCC 51541]
MGSLVNGVVGLVGGLLGGLLDALGLNTCSGYLSGSETGCLNQFKSTLTTTANNAPGVGNASNAVTALVGLLLKVLQPALD
AVGASVLQPLINDTIGLKLGLTDVHMLSVDCDGKGVQLVY
>AHV91393.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MIETVEGHVDIAALHVQSQACEHFAVFCGQLQQARGGQARLAAYGLWLVQAAAGAAVVAVLWFGLPALAAGQVSGPLLAG
LLLATLGIFEVAGPIMRGVSRLGAARAAARRIGELTRAEPDLRDPAEPQALPEHGELRAQGLRFAYPGREQAVLDGVDLM
LAPGERIGIVGPSGSGKSTLLHLLLRLEDPQAGAVTLGGCDLRHAAQADIHRRIALLSQDSPVFLGSLRSNLLIGAPEAD
EAALWQALASARLADFTRGLPQGLDTWVGEGGAGLSAGQARRLCLARVLLSAADIILLDEPTAGLDRPNEEAFLGDLAHA
CASRAVVLATHARLPEGAVHRVLALQDGHLI
>AHV91394.1 glycosyltransferase family 28 N-terminal domain protein [Bordetella holmesii ATCC 51541]
MSAPTILIMAGGTGGHIMPGLAVADILRQRGWQVRWLGNPDKMEGKLVPAQGIALAPLRFRGVRGRGAAALVKLPLLLTR
AVVQAWGHLSAIKPDVVLGMGGMWPSRAGWSRHCDALPW
>AHV91395.1 hypothetical protein D560_0218 [Bordetella holmesii ATCC 51541]
MPTLSLTGRPTRTRAWRPAWSTSRIVYPALIPGGRWRDRLWREWLSPRRVMSAFHKLQADDRRQPVGVPWGKI
>AHV91396.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MNRILLALFIVVVAALPALSATPEFWITQLNYIGLASLVALGLVLLTGVGGLTSFGQAAFVGLGAYTTAYLTTQYGTSPW
LALVAGLLITAAVAFFLGLITLRLSGHYLPLGTIAWGLSLFYLFGNLDFLGKHDGIAGIEPLSIFGFSLASGRHIYYLIW
ALVLLALWATRNLLDSRAGRAIRALKSGAGMAESMGVNTGSYKIIIFVWAALLACISGWLYAHMQRAVSPSPFGLNYGIE
YLFMAVIGGASYVWGAVLGSAVILGLKDQLQNWLPKLLDTEANFELIAFGVLMILVLQYASQGLWPIFAGWWSRLTSGAS
TRRNLAPPPQAPALPQRQRPAAGELVLEVDAIRKEFGGLVAVNDISFKVRAGEIMGLIGPNGAGKSTTFNLISGVLPVTR
GQVRFLGQRIDGSSARAIAQRGVGRTFQHVQLLPTMTVLENVALGAHMRLDVGVLAGALHTERGREAQLLHEAAVQLRRV
GLGDYLYEQAGNLALGQQRILEIARALACDPVLLLLDEPAAGLRYKEKQELAQVLEHLRAEGLSILLVEHDMDFVMRLTN
HLVVMDFGTKLAEGVPADVQQNPAVLEAYLGGIDDDLPEADRAPATAGGLQ
>AHV91397.1 osmC-like family protein [Bordetella holmesii ATCC 51541]
MECTIDWGGPSGMLFMASTGSGHITAMDGAVEGGGHNLAPRPMEMLLAGTGGCTAYDVVLILKRGRHDVTGCSVKLQADR
ADTDPKVFTRIHFAFTVTGNKLPQAAVERAVQLSHEKYCSASAMLEKTAEMTFSVTIVDTAAA
>AHV91398.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSVDRVAVVTGSASGIGLALTRRLLGAGWRVHGLDRQAWPDEESIAYRHHRIDLTQTAGIDRLAEALPAHVQVFVHCAGV
MRSGGAFDSQRDDTELLWRLHGAAPLAIIGLLAERLRPLEGRIVLVSSRAVLGRAQRAAYAATKAAQIGMARSLAAEWIG
QGIIVNVVAPGAVDTPMLSDPERGAPPQVSLPLGRLIRPEEVVSAIEFFLSPHSSAITGQTLYVCGGASLGGMAL
>AHV91399.1 orn/Lys/Arg decarboxylase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MKFNHNALLVLSDSLEAGRPASQAVQALAQAIAERGFIVQQAANLQAGQTYIQQSPHYSFIAILWDSANTAIVKECEALV
QKIRERNATVPVFLLSEAEAVNGIPVAVLKEVTEYVYLYSETPEFTANRVYTAVHRYAETLLPPYFGTLKNFTEDGDYYW
DCPGHMGGMAYLKHPVGVEFINFFGENMMRADIGVATAEMGDYLVHAGPPKQSEEIAAELFGAKWTFYGVAGSSGSNRIV
AQGAVGANEIAVVDRNCHKSLNHGLTLSQARPVYLTPSRNGYGLIGPIPAERLSKDSVRKLIDDSALTKDAVSRDPSYAV
VTNCTYDGFIYNVNQVVGQLSESVPRIHFDEAWYAYAKFHPLYRGRFAMDVADDPPNRPTLFAVQSTHKMLPALSMTSMT
HIKPSDRAPLDFDDFNDSFMMHGTTSPFYPIIASIDVAVAMMQGEAGYSLVQESIEEAIAFRQAVVNVKEELAEVDGESS
WFFDVLQPTQVKDPASGKVQAFHKASIELLSQTPDLWTLKPGDAWHGFSDADIGQADCMLDPVKVSITCPGITPDGKHLP
QGIPGSIVSKFLDDRRIEVARTGDYTLLILFSVGITKGKWGTLIESLLTFKKLYDTGAKAIDAIPSLAHASPKYAAMTLK
ELCQHMHDSMQELDLMKHSSDAVSSIPEPVLTPAEAYQKVVRYQTERVKVADFANRIAASMLVPYPPGIPVLMPGERLPA
DDTGITGYLEALQEFDKRFPGFEHEIQGVSIDQNGDYWVRAVVEEARKPQPVPKHISFKSHRVSSIKKGRQ
>AHV91400.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MLAQRDDLVAELEELRGLKRGILRLGLPTLGSSVLFAPLFARFRSRYPGIEISLAEHGSRRLEDMVLSGDIELGATLTPV
PDAFE
>AHV91401.1 hypothetical protein D560_3841 [Bordetella holmesii ATCC 51541]
MSTWLDRWDRRYTDRVRLLVEILPVLAQEPRFALKGGTAINLFEHDLPRLSVDIDLAWLPVHDYAEDAKLIAEALGRLGD
AMRARPLQLQVQASAGEGGAVTRLVASRGRARVQIETTPVMRGAVHPVRTMVVRPKVEEAFGFAEVQVLDFADLYAGTLA
AALSRQHPRDLFDVGMLLEDARADVGLWRTFLVYLTCSPKPAWEILAPRVPADFEATFEAHFKGMTSEPIEAAALLESRK
RLLARVAHWLDEPSCAFLQSVEDEQPNFGLIGLAHAADLPGVRRKLYNLAQRTAAKRAADLGQLADVLARIKAR
>AHV91402.1 cobB/CobQ-like glutamine amidotransferase domain protein [Bordetella holmesii ATCC 51541]
MTRDVQRLPGVSAPLDLAGIDLTEAAYRVLRHPTVANKSFLITIGDRTVGGLSSRDQMVGPWQIPVADAAVTLADYEGFR
GEAMSMGERTPLAMLDAPASGRMAVAEALTNLASADVARMEDIKLSANWMAACGVPGQDAALYDTVSAVSELCQAVGLSI
PVGKDSLSMKTTWAEDGESRQVISPVSLIVTAFSLVGDVRASLTPQLRGEAGDSVLIFIDLGCGRHRMGGSILAQVYNQV
GQTVPDIDQPQDLRAFFVTIRTLAEAGSILAYHDRSDGGLFATIAEMAFAGRTGVSVNLDMLTFDPQSADWGDYKIRPEQ
VAVQRDELTLKALFSEEAGAVIQVSASERDAVMQVLRGAGLSAHSHVIGGLNGGDEIEFFRDGKKIWGQPRAELGRAWSE
VSYRIMARRDNPACAQAELDVWNDTTDPGLSPRVAFNPQEDVAAPFIATGKRPRVAILREQGCNSQVEMAWAFDTSGFEA
VDVHMTDLLSGRIDLAGMQGLVAVGGFSYGDVLGAGEGWARTIRFNSKLSDQFAAYFARPDTFGLGVCNGCQMMAALAPM
IPGAEFWPRFTRNQSEKYEARLSLVEVQASPSIFFAGMEGARIPVAVAHGEGYADFSQQGDASRVLASARYIDNHGKPTE
VYPFNPNGSPQGLTSVTTADGRFTVLMPHPERVTRNVMMSWAPQQWGEKDSGGAFTPWMRFFRNARVWLG
>AHV91403.1 argininosuccinate lyase [Bordetella holmesii ATCC 51541]
MESKVSSRLKQALAPEVIQYVFLPRLTREFHANFELLNQINQAHLLMLHAQGILEPGKAQPLARALLQMQAQGPDVIELD
AAREEAYFNYEAHLIKLVGPDLGGRLHTARSRNDMGATIDRIKARDYILHLGQALSKLIAAALAQATAHTGSVMPGYTHM
QAAQPITFGYYLSALADAWMRDLDRLLHAMDSADGSPLGSCALAGTSFAIDRSQTSAWLGFSQPLANALDGVASRDFALE
LSAALSIMMVTCSRLVQDFYIWSTPEFGLLTFPDRVASTSSIMPQKKNPAVLEYLRGKTGHLIGLTGAALSTVKSTHFTH
SGDSSRESTRTCWEACEEALRCLALMELVVREAQPKTAHMAAHAAEDFSTVTDLADLLVRDADISFRDAHHIIGAVVRQA
LEQGLAAHQISSAMIHDAALEQLGRSIMLPEAQLRGCLDPVRNVNARRSGGGPASELVAARLAEQDQALQTRRLSLEHTV
QRVARAQKQLRQGMDELLAQTH
>AHV91404.1 formyl-CoA transferase domain protein [Bordetella holmesii ATCC 51541]
MTHAWVAHGTDRPHVVARWQLDFDDVCSKITQNLSGIRSHDDRAQIEDADSCQWTCCGVWRH
>AHV91405.1 diacylglycerol kinase catalytic domain protein [Bordetella holmesii ATCC 51541]
MHDPSRLSDIARDVVQRARQEGGVVVAAGGDGTLNAVAATVLGSGVPFGILPQGTFNYFGRVYGISQDTVQAVKALLSAR
PQPVQVGLVNGRLFLVNASLGLYPQLLEDREAYKNRFGRRRWVALLSGLVTLWHHRSQLDLTLEYGGRRLRTPTLVVGNN
ALQLRQVGIDKADAPEQGKLLAMTLRPVGTWALYGLLLRGLMSRLGEAEQVSSFAFERLTVGLRNRRVKVAMDGEICWLE
TPLRFEVSPQPLDFLVPADEYRVEPE
>AHV91406.1 GMC oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MSAPAGTNDMVFDYIIVGAGSAGCLLANRLSADPRVNVLLLEAGGKDNWHWIHIPVGYLYCIGNPRTDWCYRTQADPGLA
GRSLGYPRGRVLGGSSAINGMIYMRGQRADYDGWAALGNPGWSWDDVLPYFKSCEDHHAGSSEFHGAGGEWRVERQRLSW
ELLDAFRDAAAQAGIAPVQDFNQGDNEGCDYFEVNQRRGVRWTSAKAFLRPARKRPNLRVMTGARVERVVFAQKRAAGVQ
FVDEGGQRRVAQARGEVLLSAGAIGSAQLLQVSGVGPAALLQRLGVPVVHDAPEVGANLQDHLQLRLIYRVSNAKTLNAI
AGKWWGKAMMAAQYAWSRSGPLSMAPSQLGAFARSSVAQARANVQYHVQPLSLERFGEPLHAFAAFTASVCNLRPTSRGS
VRVVSADAQIAPQIQCNYLSTPEDRQVAIDSIRLTRRIVAQPALAGYRPEEYKPGFQAQSAADLARAASEIGTTIFHPVG
TCRMGSEAAAVVDAQLRVRGVTGLRVIDASIMPTITSGNTNSPTVMIAEKGADMVRRARV
>AHV91407.1 transketolase, pyrimidine binding domain protein [Bordetella holmesii ATCC 51541]
MTFAAGLACEGQKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVIATPSD
ENETRLLLSTCYAYPGPASVRYPRGAGCGAEVTSGLEIVALGKGRVRRRGRKIAILGFGTLVQAALAAAEGLDATVADMR
FVKPLDRELLRELAASHDALVTLEDAAIMGGAGSAVTEALNDMGLVLPVLHLGLPDEFIDHGDQLGLLAGLGLDAAGIER
SVRERFSALLDKH
>AHV91408.1 adenine phosphoribosyltransferase [Bordetella holmesii ATCC 51541]
MQTDYAEVIRRTIRSVSDWPAPGVTFRDITPVLQDPRTFRALIDLFVYRYMRQRLDLVAGVDARGFILGSVLAYELNLGF
VPVRKKGKLPYRTVAEEYTLEYGNATVEMHTDAVRTGQRVVLIDDLIATGGTMVAAIKLLQRLGANVVEAAAVIDLPYLN
GSQHIAGTGTPLYTVCQFSQTE
>AHV91409.1 iron-containing alcohol dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MVFGVNAHQQLPAIVAGAGAQRVFLVVDPALAQADITRAIMASLNERQLSLAVFAEVEPDPSDTTVHAAYDLCRARQSQA
IIAIGGGSTIDVAKSVAILMTNGGRIADYEGIEKFSIPPMPLYAVPTTAGTGSEVSGACVVTDTARNVKMAIRHAAFSPA
QVAILDPLAVSSMPAHVAAHAGIDAFVHAFESYLSKLANPFSDAVNLHAMKLIVGSIRQFVANRRNTAAAMDMLCGSSMA
AMSFGVTGLGNVHCMAMPLGALFHIPHGLANALCLPTVAEFNLMANPARYADVAAIFGLDCRGVPPLAAARLAVGAIREL
CADLGVPVRLRDAGVAEDALDELARRSYAADYNRWNPRHTTEADFRGLFRRAF
>AHV91410.1 DNA-binding regulatory, YebC/PmpR family protein [Bordetella holmesii ATCC 51541]
MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGADPDSNPRLRLAWDKATDANMPKDNIQRAIQRGAGGADGA
DYEEVRYEGYGVGGAAVIVDCMTDNRTRTVAEVRHAFTKNGGNLGQEGSVAFMFKHCGQFLFAPGSSEDKVMEVALEAGA
EDVLTDEEGGIEVVCAPADYAALRQAFDTAGLKAEVDGIIMKALNETELTGDDAIKMQKLLDVLEGLDDVQEVYTNVVFD
EAQ
>AHV91411.1 hypothetical protein D560_1276 [Bordetella holmesii ATCC 51541]
MGLPRWSAQSSQSRPDAGLQHSRLPGANPVTALASFLAQIAALRQPISGSSRKWGQSPPLQEGTD
>AHV91412.1 RNA polymerase sigma-54 factor [Bordetella holmesii ATCC 51541]
MTLTPQLQQSIRLLQLSSLDLEAEISQALAENPLLERDETPAEQIDSDPQREASLDTADSVTDTEIRFDDMPGSGGVYPD
EDSDSPARSDTLREHLLQQLALTRAGVRDAALAALLIDELDDNGYLGSPLSEILQWLPAELEVDEDELRAALSLVQSFDP
TGIGARDMAECLLLQLRHPDVARLPEAASPAVLGCARELCGQHLALLATGNPARLREMLRVDEATLRAARALIVRLEPRP
GRAWTVPAAEYAVPDVLVRKTRQGWQAVLNSAVMPRLQVNGLYAQMLSNQREAAYAGLNAQLQQARWMIRNVEQRFDTIL
RVAQAIVAHRAEFFTRGPAAMRPLILKDIAGELGLHESTISRATTQKYMLTPFGTMELKRFFGTGVAMDSGDSASATAVQ
EHIRQMVADENRAKPLSDSQIMERLAGQGIVIARRTVAKYREALRIAPAAVRKAQAAAR
>AHV91413.1 hypothetical protein D560_1291 [Bordetella holmesii ATCC 51541]
MRREGAVVYLAGDWSLQALGARGQVQARRDALAQTDGNTRWDLRGIERLDTIGANVLWRAWGERLPDRLRLTEGQREVFD
TLASNPGGAAPPEPSADALGWLAALGQAMFDAGNNGMRLVRMLGQLMLDFVGLVLRPSRGPWREISAQVYRTGAQALGIT
ALVGFLIGVVLSYLSAQQLQIFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMSVMGISH
SQRLILPRVVALALTMPLLVLWTDAMALMGGMLAAQMQLGISAQWFIESLPGAITITNYWIGIFKGVSFGVLIALVACHF
GLRIKPNTESLGRGTTTSVVTSITGVILVDALYAVIFSQMGI
>AHV91414.1 amidase family protein [Bordetella holmesii ATCC 51541]
MAKALNQLGALEAVRRLQRRELTAVQMARACMARIEQRESTVKAWAALDPAHVLAHAQALDSGSVQGILHGLPMGVKDVL
DTHDLPTRYGSGIYSTHQPPADAAAVALCREAGALVLGKTVTTEFATDQPGPTRNPRNTAYTPGGSSSGSAAAIADDMVP
LALGTQTAGSLIRPAAYCGIVGYKPTFGRVPRAGMKTLAENLDTIGGLARSVDDVALLASVIMGDTRLRDLQEFERPRVG
MLRTFQWRQALPETRNAYEEAARLLSRAGAEVEEVVLPAQDCSLVQLHADVMAFEAAQALTYERTRCRAQLCSRLLAMLD
AGAAIRADDHEERLLRARQSRSRALQWFERYDVILAPSTAGEAPFFDQGMGDPLFCRVWSLFGFPAVHLPFAVGPQGLPV
GLQAVGAPHTDHRLLAAARWMHGILQSTD
>AHV91415.1 integration host factor, beta subunit [Bordetella holmesii ATCC 51541]
MTKSELIAALAARYPQLAARDTDYAVKTVLDAMTQALASGQRIEIRGFGSFSLSQRSPRVGRNPKSGEQVLVPGKQVPHF
KAGKELRERVDLTGNEPGGDSSHESSDPLQSVMDMHAMH
>AHV91416.1 inner membrane transport permease yhhJ [Bordetella holmesii ATCC 51541]
MRQWLRNVMRLCGKEFHSLASDYTLLLLIVFAFSAAIYSVANGVKAEVANASVAVLDNDRSNLSYRLRDAILPPYFKPPE
AISRDEVDAALNRGRYIFVLEIPPNFERDVLARRQPSVQILVDATAMTQAGLGVTYLNEIIAREVLGFLHAQGIEAQLPV
VPVTRQLFNPNAQSPWYTAVMQIVTNVTVLAIILVGAAVIREREHGTIEHLLVMPVRASEIAMAKILSNGLVILVAAMLS
LRWVVQAGLGIPLHGSEWLFMAGLAIYLFSVTALGMYLATLAPTMPQFGLLAVPVYVVAYLLSGAATPVESMPSVMQSLV
PILPTTQFVMLTQAVLYRGAGFAIVWPQFLAIAVCGGIFLGLALRRFRSMLARQG
>AHV91417.1 benzoyl-CoA oxygenase, B subunit [Bordetella holmesii ATCC 51541]
MSGINYSDKIPNNVNLSGDRALQRALEHWQPNYLQWWRDMGPDGSQDFDVYLRTAVSVQPDGWAHFDHVKMPDYRWGIFL
APQDGQRKIHFGENMGRDAWQDVPGEHRANLRRIIVTQGDTEPASIEQQRHLGMTAPSQYDLRNLFQINVEEGRHLWAMV
YLLHRYFGRDGREEADALLQRSSGDEDNPRILGAFNEKTPDWLAFYMFTYFTDRDGKFQLCALAESSFDPLARTTKFMLT
EEAHHMFVGESGVSRVIQRTCEVMNQLKTDDPAAIRAAGVIDLPTIQRYLNFHYSVTIDLFGADQSSNAAIFYSSGLKGR
YEEGKRNDDHQLKNDTYRVLSVTDGRLREIEVPMLNALNEVLRDDFIRDSMAGVGRWNKVIEKNGIPFRLSVPHKAFNRQ
IGTLAGIRVSPEGEVLSESQWQANRDKWLPTPEDRAFVASLMGRVSEPGKFANWIAPPVMGVNRQPVNFEYVRFS
>AHV91418.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MLRKHELLELQQQARTSDAPDGPSKALGGFAAVGWGQAVRVFASPGPIYEPETARPDYWRFARALYAAGFRAGELAYNCF
SYHFTPAGSMMETAAHAVGCTVFPGGTGQTEQQVHAIRDLAPSGYTGTPSFLKIILEKADELGLPLTSLKRALVSGEAFP
PSLRDWLAARGIAGYQAYGSADLGMIAFETSARDGLVLGEDLILEIVRPGTGEPVPDGEVGEVVITTLNPDYPLVRFGTG
DLSAVLPGPSPCGRSNTRIRGWLGRADQTTKVRGMFVHPSQVAEVLRRHPEVGRARLVISGTTGAEHMVLHVEAATLGTD
AASRLATSVRDITKLRADIVRAEPAGLPNDGKVIDDLRTYE
>AHV91419.1 peptidase E [Bordetella holmesii ATCC 51541]
MNALLLSNSASSAGYLIHAQPWLSELTSTLTGSGPALFVPFAGVTRTWDDYTQQVADALLPAGIAIRGLHQEADPACALA
EARLIIVGGGNTFQLLRELRRRGLLSLIAERVRAGQAGYVGWSAGANIAAPTICTTNDMPIVDPGGFEALDLVPFQINPH
YTTAHPPGHLGETRDQRIAEFCAIHPQRKVVALPEGSALRLDARGLALLGTHPALLFHGAVAAQALAPGKLSLL
>AHV91420.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MDEGSLSLWTTRRRMTLKQALLALGAVCALPACLIAAAVAYEDYTLREQRVYQSVVETARAVGAGLEHDRNTVEGGLRVL
AASEELRHVDLAGLSGRMVQIMSLQGVDGFVLADGAGRILLNVGDAHCATRIPDTLLAARLRPEAVAVSGVQSGARAGQA
CLLMGLPVRLGESADHALYAKVRSDRLSQALRRYPLISGWVVAVLDDSGHIVARSRDELNHVGSASTPSLMQAVSEGTEG
ILHTMTRDGVDVLTAFTRIPGGSVAVGAPSATLRSGLYRSMSLAMVSGLLVLVAALMVAYALARSITRSVRALITPAEAL
GRGAPVWVPETSFRETEELAAALVHAARTLTRAREQAYHDPLTGLNNRLLFRELAQLTMRTAQREKRPLALLMLDLDGFK
AVNDQHGHAAGDSVLKQAARRMTETVRGSDVVARLGGDEFVVLLPGADALAAERVASLLIAVLSYPFAGVSASIGVSVGI
ALFPQDGATLDVLLDRADRALYEAKRAGRSCYRGAQAREALAGVAAE
>AHV91421.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV91422.1 iron permease FTR1 family protein [Bordetella holmesii ATCC 51541]
MEQVAFIVWRESVEALLVVGILYSWLRATPEGRRGMPYLWGGVAAGLGLALLLALVLLGVSEWLTDSGQEWFQAGMSLVA
CVLVVQMVIWMKRHGRTLKRELEGGARQSVANDNWWGLLILVMIAVAREGSETVVFLYGTVSAAQDGAARSCWPWPEWVA
FLSRC
>AHV91423.1 calcineurin-like phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MALRKSSFFIRFLTLGALAHVYVGIRIIPDLPMGMAGKSIAILVLIASCILIPVGMLSRSSGRPPWADRMAWIGLLAMGF
FSSLFVLTVLRDVVLVMAGLLRLASGVPDMARLRPASAAAVPLLALAGSVWGFFNARRLARVKHIDVPIDGLPAELEGLC
IAQISDIHVGPTIKAPYVQAIVDAVNALHPDLIAITGDVVDGSVAQLAAHTRPLADLRAPGGVYLVTGNHEYYSGAASWV
NEFRRLGLTVLLNEHAVIRVRNQPVVVAGVTDFGAGAFDPGQRSDPAKALQGAPAGAPVKILLAHQPRSAAAAAPLGYTL
QLSGHTHGGQFFPWGFFVRLQQPFTAGLHRQGGLWVYTSRGTGYWGPPMRLAAPSEISLIRLVGSRGQSNPEAAQTPGPC
GGA
>AHV91424.1 LPXTG cell wall anchor domain protein [Bordetella holmesii ATCC 51541]
MLTIVFTAMGLAILGLFGYFGRRRPQLAYFGFIAAWLALCVAHLTYAVRVAALGDSEEVAGHAVVFGVPALVAFVLGVVA
ARSAKVPD
>AHV91425.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MGNLMDRHSPLSPQGALDKQGKHSLEALGDIWRAAALPDEALDNVALTGQDPVLPSSFAVGAAAQVSIAAAGLAAAELWH
LRGQPRQRVMVDMLQAAQECRGHFTINGVAPPQWDKISGAYPCGDGGWVRIHAKFAHHRDGALALLGCPTGEGGTREAVA
AALQGWKALEFEQVAADAGLVVAAMRSFQSWDAHPQARALANQPLVSIERIDAADPRPLPHYGPELARPLQGIRVLDLTR
IIAGPIAGRTLAAYGADVMLVNAPHLPNIDNIIETSQGKLSAYADLETADGRIALGNLLRRAHVFVQGYRPGGLEALGFG
AQEAARIRPGIVYVSLSAYGSEGPWARRRGFDSLVQTATGLNQADPKPLPMQILDYASGFLMAFGAQAALMRQATEGGSW
HVRVSLARTGMWLRSLGRVTDGLACPMPPIGALLATTQSGFGTLSAVQHAAQFSATPAIWTRPSVPPGTHPTVWPFQ
>AHV91426.1 FAD linked oxidase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSVDERYLRDWSGLTRGVPRAVHQPASTDDVAALVRQARHEGHRITVQGGLTGLAGGAVPADGDVVINMGRMNRIEYVDD
VEGIMQVQAGATLQQVQEAAAAAGWFFPVDFAARGSCQIGGNAATNAGGTQVLRYGTLRDSVLGIEAVLADGEVVTSLTR
LVKNSSGLDLRFLFIGSEGTLGIITRLTLRLQPPPGASATALAQIPDIASLAALLRHLRVTLGPQLTAYEFMSTQFLQQA
SELTGVASPLGPGSAWSVLIQASGGTESHANLEAALTRAYDDGLVTDCAVAASLADADKFWRLRESIPELMSALKPTVNF
DCGLPMAQMPDFVDQVQRALQQRYPQARHLFMGHLGDNNIHILTGPHPESEWFNVEEIVYSALRGRQGTISAEHGIGFLK
KPFLGYTRSAGELQLLQRIKRALDPDNTLNPGRILD
>AHV91427.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MIGVVLAEFVGSTTGMGYLMITALATRNATDMFAAVTLLSVVGILLVYCVTWLERRLLHWAPEFRE
>AHV91428.1 CBS domain protein [Bordetella holmesii ATCC 51541]
MPVLDHDGQLKGVVTQSDLIAALYQITLNQEEIRPSAT
>AHV91429.1 fecR family protein [Bordetella holmesii ATCC 51541]
MAERALHWLLDLREDHSPQNRMAWQQWHQAHPDHARAWARIESVLGQLRPLAAPDSAAASRTVLLPARRNGIKALAVLAM
AGGSAWALRDTLIWREWSADERTRPGQRRALTLPDGTHLILNTNSAVDVRFSPAQRLLSLVAGEVLISTAPDPQSPPRPF
LVQTRQGVARALGTQYSVRQHSRATCVTVLQGQVQIEPRDYPAQGLLLAAGRRARYTAAGIAEASPADERDLAWKDGFIV
ARSMRLADFVTELSRYTADDLSCAQAVADLQVSGAFPTGDVPRVLAAVAITLGLHLDTQAPLWRARRLHLS
>AHV91430.1 hypothetical protein D560_1308 [Bordetella holmesii ATCC 51541]
MFKKYFIAGLLIWVPLAITIWVLGLLVTTLEGFVPGFLSSESLFGLDIPGFRFVLVIAVVLLTGVLAANLLGRSLFDQWE
RILGRIPLVRSIYNSVKQVSDTVLAPNGRAFRQAVLIQYPRAGSWTIAFLTGAPSGEVASYLPGEHLSVYVPTTPNPTSG
FFLMMPRDQVIDLDLTVDAALKYIVSMGVVAPPDITGMHPHPPAEAPRAEP
>AHV91431.1 universal stress family protein [Bordetella holmesii ATCC 51541]
MTDPTGSILLATDLSARSDRALDRAIMLARQQQCRLVALHVMEAPNATALTTPAWRRLTPDHKALAQRRLADDLAEAGVA
SEAVVVNGHPLDVILDTVAHFDCSLIVTGVARETSLGRLMLGSTVERLARQATEPVLVVKARPRQPYQDVVIATDFSEGS
RQALAAALKVAGQARITLFHAYAVPVQQDGVPQDAVVRSFYNDALQKAQAFLADTPELAGKTPPDIVLEPGQPENLLSAF
VFQRRCDLVVTGTHGLTGILRTAIGSVAEKLLEALPCDVLIVRQNKAAD
>AHV91432.1 integration host factor, alpha subunit [Bordetella holmesii ATCC 51541]
MLAEPRTLTKAELAELLFERVGLNKREAKDIVDTFFEEIREALARGDSVKLSGFGNFQVRDKPPRPGRNPKTGETIPIAA
RRVVTFHASQKLKSIVEQSGGPLDVSDDDDSAE
>AHV91433.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQVRIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV91434.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MKKLILALALAVIAGIGAWFVWRPAPDAPQVVFTTLQGKKVAMQDLKGKVVLVKFWATSCVTCVKQMPDTIEAYNTYAPK
GYEAIGVAMQYDPPNYVLNFVQSRKLPFPVALDTKGEIAQAFGNVRLTPTAFLIDKQGRIIKRYLGEYDVAEFHATVEKA
LAAG
>AHV91435.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MVAGIFCLTLSDAQAKWLGASYSPIQILFLRALIAAPVVLVLAACLGGRRSLRTRHPGIHLLRGAINIVSASCFYLGLNY
LPLAENTAIAFAAPLFVTALSVFLLKERVDGRRWLAVAAGFAGVLVIVRPGSASFQLAALLPLVTALLYAVMMITARTIG
KAEGMLTTMFYIVAGQLVCSAVLIPWFWQAPRMNDLPLFAGVAVFSTLGLTLITQGFRIGPASVVAPFDYTGLLWATLLG
WLIWGETPALSATLGAVFIAGSGLYIAWRETGHRRRRN
>AHV91436.1 hypothetical protein D560_0784 [Bordetella holmesii ATCC 51541]
MPAAVGGRGIAAQLTTSALNTAREHGWKVRPLCSYAVVYFKRHPEYNDLLA
>AHV91437.1 acrB/AcrD/AcrF family protein [Bordetella holmesii ATCC 51541]
MGFVRGDDGFSFQVMQPKIDAYRQLVLAHPAVQDVIGYNGGSLGISNSFFLIRLKSDRKERAAQVVEWLRTHAPQVAGGM
FYVNVDQDLRLPGGFNTSGDQELAILASDVNMLRLWSRNISQKLQDGSELQSVDAVGDAATQQVFIEIDRLAAQRLGVDM
KTVASVLSNSFSQRQVATLYDPLNQYRVVLELDPRYTEDPDVLERVQVLTAAGERVPLTAFANYTYSMVNDRVFHDGQFV
ATGLGFSLAPGVSLEQGLMAIDRAMAELMLPVQIQTRLGGSARSFQQTLQDQPVLILAVLITIYLVLGVLYESLLHPLTI
LSTLPSAGIGALLALRLAGMEFSLIALLRLFLLVGVVMKNAIMMIDVALVLERREALNPLAAIHQAAMLRLRPILMTNRA
GLLGALPLVLGQGEGSELRRPLGVAIVGGLFISQLLTLYTTPAVYLALDRLKRTGRQAWRRRPS
>AHV91438.1 lysE type translocator family protein [Bordetella holmesii ATCC 51541]
MALHSWLIYLIAVTGLSLTPGPNTLLALTHGALHGHRRALCTISGGAVGFIALIALSMLGISALLNAWAPALGVLKWAGG
LYLVWLGIQLWRAPGVHLHARPDMPRLRGTQMFSQGFLSAISNPKALLFYSAFLPQFIDPARSLLMQFAIMAATFAVIEF
GVEYLLARLAHRVRPWLERCGGRFNKACGGLFAIMGIALPTT
>AHV91439.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MALTLGVAADASFADGRALTVYTAGPGTLIKQLADGFTKQTGVRVDVFQATTGKVMARLEAEAANPRVDVLISASWDTAL
DMDARGMLLPYDGPNAARVPAAYRGKTYVAQGISALGIVWNSTSNTPEPKDWADLANPAYKDAVTMPDPALSGATLDLLL
GLQSAQGAGVWTLLEKLRANGMAVSGPNAQALTPVLQGARAAVFGGVDYVAYASVQKGEHIKVIFPTSGTVLAPRPMMVM
RSSKSPDQARAFLDYVLSEEGQAAVAHAWLIPAREDVAARHPLLRDLHVLQSESGQTAGGERRPLPALPRFSASTDRKRS
ARRGARCALMKSLALLATTTLVALLVLVALPVSFVVLQAVFPHLGEGSFAAPFSTWRQVLTQPGTLSLLGQTVSLGVGVA
AVAALLGIRWAPCVACAACRRHASGT
>AHV91440.1 4Fe-4S binding domain protein [Bordetella holmesii ATCC 51541]
MQTNLASWARGTDLGQEADAILRRCVHCGFCTATCPTYQVLGDERDSPRGRIYLIKQVLEGALPTQATQLHLDRCLTCRN
CESTCPSGVEYGHLIDLGRKAVDERVARRWPDRLRRWLLRKGMNSALFAPAMRLAQTFRPLLPHALKLKVPTWRAPGLLP
DPTRHPRQVLMPLGCVQPSMMPAIDAATLRVLDAVGIGVRQIAGAGCCGAVNFHLDAQSDALAQMRANIDAWWPLLMDGS
VQAIVMNASGCGAMIKDYAHHLRHDPLYAAKAADVVARVKDIAELLAPHAGELAAKLGPAPDAVFHPPCTLQHWQGLRPL
SEKLLVDLGFALQPFADAQLCCGSAGAYSLLHPGMSRSLRDRKLSAMASVHAQVILSSNVGCIGHLQGGTDMPVRHWVEV
VDERLRAGAVPAARLV
>AHV91441.1 rnfH Ubiquitin family protein [Bordetella holmesii ATCC 51541]
MANELRVTVCHAQASGVWMRELTLPAGATVGEALMASGFGQAFPDIDPWQQGLGIYGQRAEAHTRLHPGDRVEIYRALTF
DPKESRRRRAEHRRARVSKAGERQRPAGLL
>AHV91442.1 acetyl-CoA carboxylase, biotin carboxylase subunit [Bordetella holmesii ATCC 51541]
MFEKILIANRGEIALRIQRACRELGIKTVVVHSEADREAKYVRLADESVCIGPAPSRESYLNMPAIISAAEVTDAEAIHP
GYGFLSENADFADRVEKSGFVFIGPRPETIRLMGDKVSAKHAMIEAGVPVVPGSEGALPDDPQEIMRVAREVGYPVIIKA
AGGGGGRGMRVVYTEAALINAVNMTRSEAGAAFNNPEVYMEKFLENPRHVEIQVLADGGRNAVWLGERDCSMQRRHQKVI
EEAPAPGIPRRLIERIGDRCADACRKMGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTELITGVDLVQQQILIAAGEK
FTLRQRDVAFKGHALECRINAEDPFRFVPSPGRITNWHTPGGPGVRIDSHAYNGYFVPPNYDSMIAKVITYGDTREQALA
RMRIALSEMVVEGIQTNIPLHRELLQDARFIEGGTSIHYLENKLAQRP
>AHV91443.1 hypothetical protein D560_1096 [Bordetella holmesii ATCC 51541]
MKFKLSPLAAMMSSTLLVSSFSHAATDTGGANGADGGSAVQSASVNLIGGFANGGPGTTDADAAGKPASNITGKSVTFNG
PASSGSLVIGSGGMSGETYSYSVFNPIYGAGAGAGGTGGASAIGGISTAGAAGNSLNSPTPTPAQGGLGGDIGNSIITLS
HVRLQGAAGGNGGNVEAGSPTDSARGAAGAAGHGGGTVSGGISTGGAGGESLVNADGGAGGEVSANTITLANVQLDGAAG
GAGGNHSSDTAVGGAGAAGHGGGSIFGSSRNSVEPCLIAVTLDP
>AHV91444.1 sulfite exporter TauE/SafE family protein [Bordetella holmesii ATCC 51541]
MDLTMVVCLLILGGAVGFAAGLLGIGGGMLLVPFLTMLFSWKNDVPPDLVVHAAIATSMTSILFTSISSVRAHQKKGTIN
WKIVFALAPGIILGGLLSGGAVFAAINTAWLSLFFALFVGYSAWSMLRSKKPKPSRHMPGMVGTTAAGAGIGFVSGLVGA
GGGFLSVPFMVWCNVSLLVAVSTSAALGFPIALANSIGYVVSGLSEGVHRPGMLGFIYWPALLALICTSVLTAPMGARLA
HRLPVATLKRVFSGLLFCLAAYMLFKACQAFLA
>AHV91445.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MTSTPVYFVVQEDIVLLDLAGPAEALRIANHYVPGRYALHYCGPQQEVQSGLQGLYLSRLAPLPQSLPSHALVVISGQVN
ARHALERPDRQALIAWLARRAAADGFGLMSVCAGALMLAAAGLLGGRECTSHHSCLEALRALAPDARVLENRIFVESAGL
WTSAGITAGIDLALYLVARDCGARVASAVAREMVVYMRRAGSDAALSPWLDHRNHLHPGVHRVQDAVLREPAAQWSAQGL
AELAHTSARHLNRLFAEHAGCTPMDYVYQVRLTLAKELLRETRLDLERVAERTGFSSAHHLRRVWRRHEAGPPSAVRAGP
>AHV91446.1 TRAP transporter solute receptor, DctP family protein [Bordetella holmesii ATCC 51541]
MKLSRLLSAALLTATTLALPHAQAQNYKPEYKLSIVVGTSFPWGQGAEIWAKLVRERTDGRINIKVYPGTSLVQGDQTRE
FTAIRQGVIDMAVGSTINWSPQVKQLNLFSLPFLMPDYAAIDALVQGEVGKEIFKYIEKAGVVPLAWGENGYRQLSNSKH
VIKMPADMKGLKLRVVGSPLYIDTFTALGANPTQMSWADAQPALASGAVDGQENPLSIYTGSKLYTVGQKYLTLWNYVAD
PLIYVVNRDVWNSWSEKDREIVRQAALDSGKQEIVIARKGVTPQDPSLLKEIESHGVTITNLDASQHAAFVDATKSVYTK
WKKQIGEDLVNLAEKSVAERKQ
>AHV91447.1 lysE type translocator family protein [Bordetella holmesii ATCC 51541]
MTLSTWLTFFLASWAISFSPGAGAISAMSSGLKYGFARGYWNTAGLIMGILFQFLVVAVGLGAVLATSELAFTIVKYLGV
GYLIFLGLRQIRTDAAPVAVDTGDPGKASIRELVMRGFLINTMNPKGTVFLLAVVPQFVDPARPLAGQYVALAGTLAFTD
LVAMGFYTLLAAKVLRLLRSARHIRWMNRVFGSLFIIAGVFLATFRRHG
>AHV91448.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKRTFLSRAASVVAMSGLTLASALAADMPPAGYPDKPITIVVPFSPGSATDTSARIIAEKLGPRLNVPIVIENKPGASGT
IGAAFAARAQPDGYTLILTSSSTHSATPALFRKLPFDPTGDFVHVIRIATIPMMLVVREDAPYDSLQSLVKATQSKPLNY
AYGSPTSQIAGATFNTVAGAAANAVPYKSQPPAVTDLLGGHVDYLFADLSVVTSFMQSGKLRGLAFTGHERAKDFPKVPT
ILREPDVVQRFESLGMQVSPNTVGEHKAFAQKQREIWTQRAVDAKIEPQ
>AHV91449.1 maleylacetate reductase [Bordetella holmesii ATCC 51541]
MDSFTYTSQAQRVVFGPGSLARLPAELDALTLRRALMLCTPAQRGQAEQVAALLGPERVAGVFDEAVMHVPMEVVHRARA
QARQQQADCAVAVGGGSTIGLGKAIALETGLPVIAVPTTYAGSEMTPIYGVTEAGLKRTGRDVRVLPRTVIYDPELSYDL
PPGISLTSGINAIAHAAEGLYAQDRNPIMDLMAQEGIRALALALPRLAHTDQAAAARADALYGAWLCGTVLGNVGMALHH
KLCHTLGGSFNLPHAEVHTVILPHALAYNAAAAPAAMARIASALQVAHAAQGVFDLARSLGAPTALRDIGMLEADLDRAC
QIALSTPYPNPRPLESEALRVLLQNAYEGKRPD
>AHV91450.1 lysR-family transcriptional regulator domain protein [Bordetella holmesii ATCC 51541]
MGPQGVWRTLYAAVRDEDRDASYIDEFLTIARDISFKTLSGIKGTKQ
>AHV91451.1 chromosomal replication initiator protein DnaA [Bordetella holmesii ATCC 51541]
MKEFWQTCVSRLEQELPPQQISAWIRPLVPLAYDEEQAVLRVAAPNRFKLDWVRKNFSHQIEALATEWYQRPVQVQFELP
SHSATPRMSMTPRASAPSTAVPAQAAAPQVAPAMPPTAARVEVAPPPAPPVQVSAAADAANIVYERSRLNTDLTFENFVT
GKANQLARAAALQVAENPGTSYNPLFLYGGVGLGKTHLIHAIGNAMVAAGTGVRVRYVHADQYVSDVVKAYQRKAFDDFK
RYYHSLDLLLIDDIQFFSGKNRTQEEFFYAFEAMVAQRKQIIITSDTYPKELSGIDSRLISRFDSGLTVAIEPPELEMRV
AILLRKAESEGVPMPEEVAFFIAKHLRSNVRELEGALRKVLAYARFHGRDILNVDVCKEALKDLLSVSNGQITVENIQKT
VADFYKIKVADMYSKRRPANIALPRQVAMYLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKISDVRAKQAELNHTLHVLE
QTLKG
>AHV91452.1 heme ABC exporter, ATP-binding protein CcmA [Bordetella holmesii ATCC 51541]
MDDAIVLEDVSHRYGQVWALREVSLTLPAGKTIGLIGPDGVGKSTLLSLIAGVKRLQTGRIRVLGGDIARPAFRNELAGR
LAFMPQGLGRNLYPTLSVYENVDFFARLYGLDALARKRRIERLLHATALAPFPDRPAGKLSGGMKQKLSLCCALVHNPEL
LILDEPTTGVDPLSRRQFWALVDTLRGELPGMTVVVATAYMEEAQRFDHLVAMDAGNVLVCDATAAVMQRAQAQTLEQAY
ISFLPPQRRGEQKPLDITPFEPQPGPAAIEAVDLTRKFGSFVAVDHVSFKIERGEIFGFLGSNGCGKTTTMKMLTGLLDV
SSGTARLLGQPGDASDMATRMKVGYMSQSFSLYEELTVKKNLLLHAHLYRMEGAQARQAVERALDAFELLDVADSHPVSL
PLGIRQRLQLAAACLHGPEVLILDEPTSGVDPAARDMFWRHLLRLSRQDRVTIFVSTHFMNEAQRCDRISFMHRGRVLAV
GTPAELTASEHAASLEDAFVAYLEHADPQQTLETASAPHADLAGSAPGVPAGPLAWWRRTWAFAQREALELRRDRMRLAF
ALLGPIVLLCIAAWSVSFDVENVRYAALDRDQSIESRRLLEHFSGSRYFRSQTPLSNDAQITQRLTDASVKLVIDIPPGY
GRELLAGNKPRIGFYIDGAQPFTAENVRGYVTGIMLEYNASLMAARPQGAVSLPARVDPRFMFNQEFRSIYAITPGILML
ALILIPTMLTALGVVREKEMGSITNLYASPATVGQYLLGKQMPYVVLAMMSYLSLVFLCIVLLRVPLRGSFLSLSLGALL
FVLAATALGLLMSTFVRSQVAAIFGTAILCLIPSVNFSGLLYPVSTLTGSSYWVGVGFPSSWFQLISLGGFTKGLGWHSF
LSMYAALAAFALLYIGAARLLLRKQEA
>AHV91453.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MLSLAMGLRQSLGIFLPPLTQDLGISVSDFTIAISVQNLVWGVLQPFAGAMVVRWGFRPLMVAGALLYILGMVLLTTAHG
MLGVLLGAGFAVGAALAATGSAVAMAASVRPVPPAMRSLVLGIVSAAGSLGALVAAPLGQSVAQTWDWRMGGVSFVVLAV
FMLPAAWYAGKVDSLPRLPAPVDGEQNARQALSMAMKNLPFVVMATAYFVCGMQLVFLTTHLPAYLALCGLDPMLSAKAL
ATIGGFNAMGSLFFGWAGGRWNKQILLGLIYILRSLSFIWYFHTLPTPESTLVFAAVIGFLWLGVVPLVSGWIAQTFGLR
WQAMLAGVAFCGHQLGSFTGAIGGGLAYDLLHSYTLAWQVGAGMGIAAGIVQVMVAYLARPRPPWAPVAT
>AHV91454.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91455.1 PIN domain protein [Bordetella holmesii ATCC 51541]
MSNIVRRLMLRLAAAAVYQPVWTERIGHEWRRNAARIWDVAPDFLQQQWAQMNAQFPQALESDIEPYELSLRYSDPKDFH
VIAAGLARRARCGHQHPPQVQVATWNLKDFNRSELRRQGLDAFNPDTLIARWYAEHPQAIRDALALVPQDYVALGRDAEP
LATTLHRERLYRVKNLVQ
>AHV91456.1 nitronate monooxygenase family protein [Bordetella holmesii ATCC 51541]
MSQNLSTVTCIEDLRVVAKRRVPRMFYDYADSGAWTEGTYRANESEFHKIKLRQRVAVNMDGRSLATTMAGIDVKMPVAL
APTGLTGMQHADGEILAAQAAAEFGVPFTLSTMSICSIEDVAQATQKPFWFQLYVMRDREFIGNLIDRAKAAGCSALVLT
LDLQIMGQRHKDIKNGLSAPPKPTLRNMLNLALKPRWCLGMAGTKRRTFGNIVGHAKGVTDLAALSSWTAEQFDPRLSWD
DVAWIKERWGGKLILKGILDAEDARRAAATGADALIVSNHGGRQLDGALSTIEVLPSIVSEVGSQIEVWLDSGIRSGQDV
LKAMALGARGTMIGRAFLYGLGAYGKAGVTRALEILYKEADVTMALCGRRNLSEVDTSILVPGTYPR
>AHV91457.1 putative methyltransferase domain protein 1 [Bordetella holmesii ATCC 51541]
MRNALPGMEPWLPVPLKSQVSLPRLRDWLKLLSFDVDRGRHGRFAPACRSEQWLQRWHFLEAMGERWWRLGGAVYVVSAV
KRVGGMRLIGPAWKKKTKAASAAQVVVNRQAPDGGG
>AHV91458.1 superoxide dismutase [Bordetella holmesii ATCC 51541]
MAYTLPSLPYAYDALEPHIDAQTMEIHYTRHHQTYINNLNAALQAKGLPFPPIEELVAGIETLPQDVRAAVRNNGGGHAN
HSLFWEVMSPKGGGKPQGRLAAAIDADLGGLDSFKEQFTKAALTRFGSGWAWLSVGPDKKLVVQSSANQDSPLMEGYTPI
LGLDVWEHAYYLKYQNRRPDYIAAFYEVVNWPEVQRRYEAALA
>AHV91459.1 23S rRNA (uracil-5-)-methyltransferase RumA [Bordetella holmesii ATCC 51541]
MNIESLDLEARGIARRDGKVVFVEGALPGERVIAATVRKKPSYEIARVETVLRPSAQRVEPRCPHFGVCGGCAMQHLEPT
SQVAIKQRALEDTFWHVGKLRPQRVLPPLHGPTWGYRYRARLSVRVVPKKGGVLVGFHERKSSYVADMRECHVLPRHVSD
LLVPLHAMIGSMSRPERMPQIEVALGDAVTALVLRHLEPLTDHDIAILREFAREHDVQWWLQPKGPDTVHALDPAHTDAL
AYTMPEFGLRMPYRPTDFTQVNHAINRAMVSRALSLLDVQPTDRVADLFCGLGNFTLPLATQGREAVGVEGSKALTDRAM
EAASRHGLAATTRFATLNLFEVDVSWLRGLGYFDRMLIDPPREGAHAVAQALSLLSAAERPYRIVYVSCNPATLARDASI
MVHEGGYALKAAGVINMFPHTGHVESIAVFESLPEADVLHAQEQARLKAEEARLASQAAAEAAAA
>AHV91460.1 PQQ enzyme repeat family protein [Bordetella holmesii ATCC 51541]
MTAVAGKSHVAAHGLAIVLAVCGVVLTVGGIKLALLGGSWYYGVTGVALVASGVLLWHCNAWSAWLYSATLAGTMLWSLL
QVGLDFWALLARLAFLCLLGLGFWLPPVVRSLARGPRSNRAARLITAFFLLMFAALIVASLLRDDSVSPREILPAAVAHA
APVQGDGEWAGDPQGTRFSPLTPISPANVAALQVAWTYQGEDSESARAFEIAPLKVGSHLYLCAGGLIALDADTGKLRWR
HRDEQRGATPTCRGLAYYRVPGMDAQAFCAARLYATTDDARLIAVDAASDQSCRGFGGQGQIDLNTAAPLPGQLYMSSAP
RVVRDKVVVAGWQRGPNTQGEAAGALRAFDARTGQAAWSFNPAMPDGQPALLGLAHASAPLSVDESLGAIYVPTANAMPD
YYGGDPAGPGSVQRYSSAVIALDAQTGQERWVFQTTPHDIWGGDQAAQPTLLDLQVQGRRLPVLIQATRRGQLFLLDRRD
GRPLRLEVKFDPVGPDGEEAMWGLTPFDQLWCRVRQRSAGRQPGRATFLTLPGTLAPASWGGVAADPERKLLILSWAPAA
ASRGQEPLISPLGMSCSAPPHHYLTGVDLNDGQVLWNSRLGSAFESVWSFARRHTLLPAGSLITRAGLVFIATGQEQSLR
AVDLHSGDVLWRSRLPTGAQATPLTYQTAAGRQFVVVATASGVQQGGVRGARLTAYALAR
>AHV91461.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MRHSLESLATFAQVAAAGSFSAAARALGKRQSTVSETIANLEVDLNLVLFDRSQRQPVLTEAGQTLLAHAQQVLAANERL
NRAASQLADGLEPRLTVVLSDTFQSDTFEATLSAIDKRYPALRFECLIAEHEDVVALVQQGRAHLGLMAAQSDYPPDVAR
TIRWRPSRASACRIWPMRESCG
>AHV91462.1 flavo, HI0933 family protein [Bordetella holmesii ATCC 51541]
MAAETLAQAGAQVDVYDAMPSVGRKFLLAGRGGLNLTHSEPLPQFVDRYGARAGQVATWLTHMDPQALREWTYGLGVETF
VGSSGRVFPKEMKAAPMLRAWLARLRAQGVRFHMRHRWLGWPPGTPAGPRCLRFDTPQGEEQHAADAVLLALGGASWARL
GSDGAWLAPLTANGVDTTPLLPANCGFDVSWSEHFKTHYAGQPLKSVRLSLAEAAPGRAGECMISAHGIEGGLVYALSAP
LRDSLAATGHATAWLDLLPGWSAQRVLQAVHHPRGARSWSSHMQSRLGLKGVKTALLRECLPDFNDLDLLARRIKALPIP
LLRPRPIDEAISSAGGVRLEALTPHFMLHALPGVYCAGEMLDWEAPTGGYLLTACLASGKAAAQGIWADMQTALP
>AHV91463.1 protein-P-II uridylyltransferase [Bordetella holmesii ATCC 51541]
MTPIDLLPIKERMQAARAAAVADFRHHHRPDTLLGELRRIVDHALRELLKLCPLPPGATLAAVGGYGRGELYPHSDVDLL
ILLPHAPAGAAAEAIETLVAALWDLGLEPGHSVRTLADCEAEACADITVETALLESRWLAGSRNLMKQFEAAMAARLDAR
AFFQAKRVEMQQRHTRYQDTPYALEPNSKESPGGLRDLQVILWMARAAGFGRNWRAVAKAGLLTTSEARDLRRAEQAFKR
LRIELHLLTGRREDRLLFDLQPALAEIYGISSTVTRRASELLMQRYYWAARLVTQLNAILVQNIEERLLPRPDSDARPID
EDFRNLHERLDIVREDCFERNPTLLLRAFLIMQQHPELTGMSARTLRAIWHSRHRIDAQFRRNPVNRRLFLQILQQPRGI
VHELRRMTMLNILPRYLPVFRRIVGQMQHDLFHVYTVDQHTLAVIRNLRRFTMPEHALEYPTASQVMAGMDRHWLLYVAA
LFHDIAKGRGGDHSELGARDVRRFAHEHGLSPEDAELVEFLVRQHLLMSAVAQKRDLSDPDVINDFARQVKDERHLSALY
LLTVADIRGTRPKVWNAWKGKLLEDLYRLTLTALGGAQDAHTVLAERKEEAARLLRLAGLRDDARDAFWKQLDVAYFLRH
DASEIAWHTRYLYYQVQPEEAVVKVRPTEEGAGLQIMVYTRDTPDLFMNTCGYFDGKAFSIQDARIHTTRQGWALDSFIV
LPTEPLSDLRAQAALVEHELAARLRQARGDTPLARSHGYHRNRQSRLSRVFPVMPQAELHPDERSQSWRLSVTATDRAGL
LYALAKVFAENGVDLIMAKVMTLGDRVEDVFVISGSVLERPRTQMQFEHAVLDALAGEEPQQKAA
>AHV91464.1 isochorismatase family protein [Bordetella holmesii ATCC 51541]
MLLSADQSILLVVDMQERLMPVIDRGQDVVGTADKLARAARLLDVPVVATEHHRPMLGGTLAPLNEQVQSTFQKMHFSAM
REPGFEAWLPPARKTVLLTGCEAHICVLQTALGLLAQGWRAVVVADAVGSRKASDHHAALRRARAAGADIVTSEMAIFEW
MQTCEHPRFRDVLRLVK
>AHV91465.1 GTP-binding protein TypA/BipA [Bordetella holmesii ATCC 51541]
MTRALRNVAIIAHVDHGKTTLVDQLLRQSGTFRENQAVAERVMDSNDLEKERGITILAKNCAVEYEGTHINIVDTPGHAD
FGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVNKIDRPGARPDFVINATFELFDKLGATEEQLDF
PVIYASGLSGYAGLTEDVRSGDMRPLFEAVLKHVPQREDDPNGPLQMQIISLDYNSYVGKIGVGRVNRGRMRPGMDVAFR
FGPEGQVQRGRINQVLKFSGLEREVVEEAEAGDIVLINGIEDLNIGTTVTDTSTPEALPVLRIDEPTLTMNFMVNTSPLA
GREGKFVTSRQLRDRLDRELKSNVALRVRDTGDDTVFEVSGRGELHLTILLETMRREGYELAVSRPRVVFKEVNGVKCEP
YEALTADVEDGHQGGVMEELGRRRGDLQDMQPDGRGRTRLEYIIPARGLIGFQNEFLTLTRGTGLMSHTFHEYAPVREGS
IGERRNGVLISQDNGDAVAYALWKLQDRGRMFVSPGEPLYEGMIIGIHSRDNDLVVNPIKGKQLTNVRASGTDEAVRLVP
PIQLTLEYAVEFIDDDELVEITPKFIRLRKRYLQEHERRRASRDNA
>AHV91466.1 putative dehydrogenase [Bordetella holmesii ATCC 51541]
MTPISDRKIRFALVGCGRISKNHIAAIAQHNDRAELVEVCDTDPAALKAAAQATGATPYASLTDMLANSTADAVILATPS
GLHPWQAIEVAQSGRHVVSEKPMATRWEDGKRMVKACDEAGVRLFVVKQNRRNATLQLLKRAVEENRFGRIYMVTVNVFW
TRPQEYYDAARWRGKWEWDGGAFMNQASHYVDLLDWIIGPVESVYSYTGTLARRIEAEDTGVTALRWRHGAMGSINVTML
TYPQNLEGSITILGEKGTAKVGGVAVNRIDEWKFAEPHPDDDNVREASYETTSVYGFGHPLYYDNVIRTLRGECEPETDG
REGLQSLALLTAMYRSARDGVRVPLPLD
>AHV91467.1 hypothetical protein D560_0555 [Bordetella holmesii ATCC 51541]
MQHRHPAAEEIRATIAQIRTDLQAQGENRATLASTLAKLIDLAAHKT
>AHV91468.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91469.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVALTCPQI
>AHV91470.1 putative methyltransferase [Bordetella holmesii ATCC 51541]
MTQEFSRARFIMVQPSHPDNVGSAARAIKTMGFADLVLVDPKMPDMTVQPEALALASGAVDVLERAHICATLEEALAPVT
LAFALTARVRDLGPPPCDIRQAATLSREHLDNNPGGAVAIVLGTERSGLTNEQIGLCQRICHIPANPEYSSLNVAQALQL
AAWELRYALLDGAGATLLPPSRAQQPDPGAQLASGEAVHAMLAHWEQALVAVDFLNPAHPKKLMPRMRHLFTRAALTRDE
IDMLRGVCTAMLDVASRAAPRKSRRDEAN
>AHV91471.1 phospholipase C, phosphocholine-specific [Bordetella holmesii ATCC 51541]
MNSNNTPIHAGKRRFLRNALASTAGLTALSMFPPSIRRALAIPANNRTGTINDVEHVVILMQENRSFDMYFGTYKGARGF
GDRITIPLPGPRSVWEQSNGTRVVMPYHLDSTQGNAQRVAGTPHDYADAQNAWDGGRMQQWPRYKQDQSMGYYRQKEVEF
QFALAEAFTLCDAYHCASHGGTNTNRLFHWTGTNDPLAQGNGPSTRNQWDGLGASSTGWTWKTYPERLQSAGVSWKVYQN
LPDNYTDNPLAGFQQYRRANELAGNASSGSPYTPWTPSMDAGNPLYRGIANTMPDGGFLQALRDDVQNGTLPQVSWIVAP
ANYSEHPGPSSPVQGAWYIQEALDALTSNPDVWSKTVFLINFDENDGYFDHVPSPAAPSINADGSMAGASTVNTDMERHT
HASAQDAADNRVYGPGPRVPMYVVSPWSRGGWINSQAFDHTSVLRFLEARFGVAEENISPWRRAVLGDMTSAFNFANPND
EVLPDLNLLTRTGSDQERSAQQALPAVPLPDISAQARPVQDAGVRPSRALPYELHTSGRSQPATGTMWLVFANTGKAAAV
FHVYDRLHLDRLPRRYTVEAGKQLEGSWDVAGDSGMYDLWVLGPNGYHRHFAGDLALARTAQLDAEIRVCYDVANGDVYA
SFLNTGNVACHFEVTPNAYYTNNESWSISVAAGGQFEQHWALANSGAWYDFTVRLSEDPAFVRRFAGRVETGKASVTDPA
MGQ
>AHV91472.1 bacterial transferase hexapeptide family protein [Bordetella holmesii ATCC 51541]
MNKHRTVIEDDVFIGSDTQLVAPVRVGRGATLGAGTTLTRDAPADTLTLSRTRQTTVAGWKRPVKKS
>AHV91473.1 hypothetical protein D560_0919 [Bordetella holmesii ATCC 51541]
MELETAYWDGELVIAVQPREARMSHWIHAPRAWRSLDGQMLFDLTDSDWDLYGVSGDDEDCLVLALRRYPGAGPLVRLTI
ARGSLDMHLEGRSLPADDLLQQLQAWTDA
>AHV91474.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91475.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MSRAASAPSYSLMMVMLGLLSCVAPASIDAYLPAFGALQREFGVPQETVQLTLGVYMFCYAAMLLLHGTLSDSLGRRRVV
LGALGFYVWGALLATAAPGFGWLLAAGPCRDCPPAPGSW
>AHV91476.1 methylisocitrate lyase [Bordetella holmesii ATCC 51541]
MSRPASPGALFRRALTEEQPLQIIGAINANHALLAKRAGYRAIYLSGGGVAAGSLGLPDLGINTLDDVLTDVRRITDVCD
LPLLVDIDTGFGPSAFNIGRTVKSLIKFGAAACHIEDQVGAKRCGHRPCKEIVSTAEMADRVKAAADARTDDDFFLIART
DAIASHGVDAAIERALACVEAGADGIFAEAAYDLATYRRFVDAVKVPVLANITEFGKTPLFTVDELKSADVGMVLYPLSA
FRAMNKAAESVYEAIRRDGHQKNVLDLMQTRDELYDRIGYHAYESQLDSLFAKDKTK
>AHV91477.1 preprotein translocase, SecY subunit [Bordetella holmesii ATCC 51541]
MAKAQALGKTGTRYGDLKRRIVFLVLALVVYRLGTHIPVPGINPDALADLFRQNQGGILGLFNMFSGGALSRFSIFALGI
MPYISASIIMQLMSVVVPSLEALKKEGEAGRRKITQYTRYGTVVLALVQAVGISVALESQPGLVVDPGMLFRFTTIVTLV
TGTMFVMWLGEQITERGLGNGISILIFTGIVAGLPTALAGLLDLVRTNSMSVVSALFIIALVVLVTAFVVFVERGQRKIT
VNYAKRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFSTGDRMVWLRDLAAALEPRQPLYITLYSVAI
IFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGEQTARYIDKILMRLTLAGALYITLVCLLPEFLVMRWNVPFYFGGTS
LLIIVVVTMDFMAQVQAYMMSHQYDSLLKKANFKGTGLPMR
>AHV91478.1 translation elongation factor G [Bordetella holmesii ATCC 51541]
MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWRGMAGNYP
EHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYGVPRLAFVNKMDRTGANFFKVYEQLRT
RLRANPVPIVIPIGAEDTFTGVIDLVKMKAIIWDEASQGTKFEYADVPAELQATAEEWREKLVEAAAESSEELMNKYLET
GSLEEAEINTAVRQRTIAGEIHPMLCGTAFKNKGVQRMLDAVIDYLPSPVDIPPVEGTDDNGNEVKRSANDDEKFAALVF
KLMSDPFVGQLTFVRVYSGVLKSGDTVFNPIKGKKERIGRILQMHANNREEIKEVLAGDIAAVVGLKDVTTGETLCDIDS
HVTLERMEFPEPVISQAVEPKSKADQEKMGLALSRLAQEDPSFRVRSDEESGQTIISGMGELHLEILVDRMKREFGVEAN
VGKPQVAYRETIRKVCDEIEGKFVKQSGGRGQYGHVVLKVEPLPPGGGFEFVDAIKGGVVPREFIPAVEKGIQETLPAGI
LAGYPVVDVKATLFFGSYHDVDSNENAFKMAGSMAFKEGMRRASPVLLEPMMAVEVETPEDYAGSVMGDLSSRRGMVQGM
DDMVGGGKIIKAEVPLAEMFGYATNLRSLTQGRATYTMEFKHYSEAPKNVADEVIAARAK
>AHV91479.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MGETVFSWCENALGIKPNEMFSQTEMNYIVGNSHKRWPARPGSMGKPYPGHNVAVIDDAGQPVAPGEVGEVALNRLDIHG
YPDPVMFIGYWRNDAATAAKYTGDWCRTGDLASIDADGYLWYAGRADDVFKSAGYRIGPGEIENCLLSHAAVANAAVVPK
PDPERGALVKAYVVLTDDYLGRDTEAITQALQEHVRARLAPYEYPKEIEYVTHLPMTTTGKIQRVVLRRLEQERAANRSD
A
>AHV91480.1 beta-ketoacyl synthase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MTKRVAIIGLAFRFPGTSTEHYWSDLLDGKNLITQVDATRWSEDAYLHPDKNHPGSAYTRAAGSLGDVSQFDANFFGISP
REASLMDPQQRLLLEMSWEALEDAGVKPTHLRGSNCGVYIGISSADYAYRMSEDLGAIDASTATGNTASIAANRLSYFFD
LRGPSIALDTACSSSMVALHQACRAIQSGECTYALTGGISLHLHPYGFITFSKASMLSPSGQCNVFDASGDGYVRSEGGG
IFVLKDYDQALADGDRILAVVAATAINTDGRKAGLTVPSAEAQADLLRHVYAQAGISPAELDYLEAHGTGTSVGDPIETR
AIGAALGKRRPVTQPLPIGSVKSNLGHLEPASGVAGLVKAIYALNHRVVPATIGVRTLNPNIAFDDWNIEVATQNRPLKP
QGKLTIGVNSFGFGGANAHVILESPPCVAEPSATKLVKNAPVPLIVSGKTQQALRDAAAAMAQRLRQDTVRPLYDVAYHA
ALRRDWQPHRALVFASDRLRAADDLQLLAEDRAPKYRVATETVQADARGPVFVYSGNGSQWAGMGKRLMADPVFASAVHE
VDALFSEHADFSPAAELSSLSANERYDFTEIAQPTLFALQVGITRMLAQRGVVPAATMGHSVGEVAAVWACGALSLPDAV
RVIYHRSRLQGLTKGKGRMTAVGISAAETEALIAELKLGRGLSIAGANSYRGATVAGDPALLDVLEAALGERSIFHRRLS
LDYAFHSAAMDPIEGGIQQSLADIKPRDVNIPFYSSVSGQA
>AHV91481.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MRIALVTDAWHPQVNGVVRTWTAMCTLLRAWGHEVRVISPEGSRTVPAPSEPDLRLCLTPRRQLRRLLQGWVPDALHIAT
EGPLGLAARSMALKRGWRFTTSFHTMFPDYLQARMGIPAGLPWRYMRWFHRPSQRVLVPTPTVADVVAARGIGNLKIWSR
GVDATHFQPVASELLAHLPRPIWLSVGRVAREKNLDAFLALDLPGSKVVAGAGPDLARLRRQFPEAHFLGAQGDAQLPEL
YSAADAFVFPCLTDTFGLVMLEAMACGTPVAAFRSEAPLAVVRQGQTGVLDDDLARACLAARQLDRRTVRDWALTRSWDA
VAQDLLAALVPIDGMAAQSTPEQALGV
>AHV91482.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV91483.1 transcriptional regulator, LysR family [Bordetella holmesii ATCC 51541]
MKLDHDHLRALAAVVREGSFERAASALHVTASAVSQRIKTLEDRSGRLLIQRTVPARPTPDGQVLVQLAEQTALLEHDAL
HRLGVAEDEITQASIPVAVNHDSLETWFIDAATRFAARSSATLDMQSEDQDHTAALLRNGTVLGAVTTLAEPVQGCRIHP
LGSMRYVATCSPDFLARHFSSGVTARTLAAAPVLVFNRKDGLQARFARRIMRSHPWQPPVWWVPSSRAFVQATLDGLGWT
MNPLPLIKDELDSGRLVPLRRRAWEDVPIYWQHWRVNSQAMSVLTDSVLAAARALVRKRQAQAVQPAGSSPV
>AHV91484.1 alkylhydroperoxidase AhpD family core domain protein [Bordetella holmesii ATCC 51541]
MATQKLLTDEDVRNNPQAWAVFEDIRATRNSDFVNNFWRALANDPPHLQRVWEQLKQVMMTEGELSPLVRELIYIAVSTA
NGCSYCIHSHTASARAKGMTAGQHTELLAVIGMAAQTNALVTAMQVPVDDAFQVP
>AHV91485.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MSVSAHVMKDVLNLRQIEAFKAVIEHGTVSQAATVLGVSQPAVSKLLTHLEADSGLKLFDRVRGKLAPTTQGMRLYREID
RVFNGLRQVEQAVESIRRAEQRTLNVGVLPALAAPFIRRVTMQFLARHPDVRVSIQSRGSLFLADWLATRHIDVALLGAM
STTPISIANRCFANPWSVRCPSTTS
>AHV91486.1 K+-transporting ATPase, F subunit [Bordetella holmesii ATCC 51541]
MRPTVRERPPMTALYWLGGLTAALLFAYLAYALFNPEKF
>AHV91487.1 marR family protein [Bordetella holmesii ATCC 51541]
MSMPDSTSAAVRFGPLLAQAARSWRRAADRRLVPFGLTEATWLPLLRVSRAGHPMRQKDLAASLGLDGSSIVRVLDALEA
SGLLARQPDPEDRRAKALVLTPAGQAVVEQVEAVARQVREAALADLPDEEVLRACALLDLICQRLDGEGESA
>AHV91488.1 transglycosylase SLT domain protein [Bordetella holmesii ATCC 51541]
MPLLALLAAGCAPVDAQQRADVPPQGLQASLGQQQGARPIAVPSAVLAGLPASPESSARQAVVAAREAVARKQWSVLGAL
VPQADSDVLGAYPQYWLLRYQLAVPPNGVRPNRQLERFLADNSGSYLEDRLRSDWILAAARSGDFETVRRLAPAKPGNAQ
VNCAVLDARHMTGKRVSAEEALSAFSPGSACWALYDQLVADRILGWDELLPPLRDAIESNRTTDARKLVQYLFEPRDVKT
FDLMMRDPMKWLVRQGKTPVGRNEKELVALALARLARSDISVADSYLEREWARHLPRSHLAWVRGQYALVAATALDPRAY
DWYREAGHIRMTDNNHAWKVRSALRQQRVDWKWVVASIDEMSPAQRNEEVWVYWKARGQAAQGHAAEARRAYARIADQFN
FYGQLATEELGQRIQVPQQAAPVTDAEIRAARANPALVRAIHMFRLGWRAEAVPEWNFALRGMSDRQLLAAAELARAERI
YDRVVNTSERTEREFDFLQRYIAPFEGRVSAKARALDVDPAWVYGLIRQESRFIMDARSHVGASGLMQLMPSTAKWVAGK
IGMTDFTPASVNDFDVNTELGTQYLNIVLRDLDGSQMLASAGYNAGPGRPRNWRATFTCPVEGAVFAETIPFTETRLYVK
HVMSNAVYYAAMFTGQPQSLKERLGNVVPPAAVMAKSQ
>AHV91489.1 hypothetical protein D560_3493 [Bordetella holmesii ATCC 51541]
MRVPFLHCAPLVSIHPAKRHPLLSLVVQMAGDFIRFAPS
>AHV91490.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MKILEPFLAWRDEIAALRRDIHAHPELAFEEFRTADLVAERLQRWGIEVDRGLGGTGVVGIIKGKQDGPRAVGLRADLDA
LPMQEVNTFAHASQHAGKMHACGHDGHTAMLLGAARYLAEHRDFAGTVYVIFQPAEEGGGGAKRMVDDGLFTRFPMDAVF
GMHNWPGMRAGQFGVTPGPIMASSNEFLIRIIGKGTHAGMPHLGVDPVMTAVQLAQSLQTIITRNRAPLEAAVLSITQIH
TGSADNVVPNDAIMRGTVRTFTHETLDLIERRMEEIARHTCAAMDCDLEFEFTRNYPPTINHVAETVFAVNVMRDIVGAE
NVFDQVTPTMGAEDFAFMLQAKPGCYVWIGNGSGDHRDAGHGAGPCMLHNGSYDFNDELIPLGATYWSQLALKWLAQPA
>AHV91491.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MRAGIPIADLSAGLFAAIGILIALLDREQTGKGRWVQTSLLQSQVWMMDFQATRWLIDGEVPGQSGNDHPTSSPTGVYPT
ADGYINIAAMGSSMFARLCDVLEMPGLIDDARFASAGLRVENRPALNEQIVSRTRQRTSAEWIERLNAAGAPCGPILSMD
GTFANEQVHHLNMTRKVRHPQRGEVEILAQPVIFADSEPGPVTPAPETGAHSDDIRTWLGLDGAARERLRAVGAV
>AHV91492.1 deoR C terminal sensor domain protein [Bordetella holmesii ATCC 51541]
MTLNPRQSALLEQVRSQGSASIEELARAFDVTLQTVRRDVNLLAEAGMLSRFHGGVRSEASTIENIAYRQRQGLHAEGKR
RIAEAVARAVPDGCSLLINIGTTTEAIARALLRHRGLRVITNNLHVADILSDNPDCEVIVAGGVVRPRDRGITGEATIEF
IRQFKVDIGLIGISGIEADGTLRDYDFREVRVARTIIDQSREVWLAADSSKFQRQAMVELAPIARISRFFHRRRTAARAG
PNPTRRGRALPYRWRCALTLFLRNHELTPFRRHAHTR
>AHV91493.1 aconitase family protein [Bordetella holmesii ATCC 51541]
MLGVVSSGEIWMRVPETLMMCWHGRLAPGVMAKDMMLYLIGRYGMNGGRYQAVEFCGEAVGALSMRERMTLSNLSAEMGA
QAGLIAPDAVTQAYLHDAGAALTDIAHWRSDTGAPAHWHEFDASTLAPQVAAPHSPANTAPVYDYPDTPVQVAYIGACTG
AKLDDLRAAASVLRGRRVPPQVHLLVAPASQREQAASALVQLGLRAVIAPSYSGLYFRNAFNVGLLLLTCARAHEIAAGD
SIELDLPGQCVRKVDGTVLPCEPVPDFLLDMVQAGGLLMQLKRRLADGSLPRHPMSAL
>AHV91494.1 molybdenum cofactor biosynthesis protein B [Bordetella holmesii ATCC 51541]
MTTENTVSLACAVLTVSDTRSAGDDTSGNLLAHNLAHAGHMCVRREIVRDDVYLIRRVMSDWIADPQVQVILTTGGTGFS
HRDSVPEAVRPLFDKEIDGFGELFRQVSYEEIGSSTIQSRALAGYANNTVIFCMPGSNGACQTAWSRIIAEQLDSRHKPC
NFATHLARREAS
>AHV91495.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MRVLPVPSALSLVVALAAVSLSQPVHAQSSAPLAFALPAASLDTTLTEIARLGKIVVSYDPQLVRGLHAPAVRGVYTVDA
ALRAALAGSGLEPARVADGTLTLRRVDVQATTLAPVAVSAQARTDSSGSYVVPASSSATRLLLSQRETPQSVTVVTRQRM
DDQAMQNLDDVLQATTGISVIQNGSERSVYQARGQLVDNLQIDGLATNISNAYSFDAINKPTTEIYDRVEVVRGATGLLE
GAGNPAAAINLIRKRPGMESQGS
>AHV91496.1 methylated-DNA-[]-cysteine S-methyltransferase family protein [Bordetella holmesii ATCC 51541]
MSRVMEDSAALDIDTPLGGMRLLASGAFLCGAWFLDLDDLELPAREHATAAEAEVLRLTHEQLRQWFEGQRQDFDLPLAP
RGTVFQRAVWDGLLALPFGGTVSYGQLAQRIGRPRAIRPLSQAVGRNPISIIIPCHRVIGYDTALTGFGGGLKRKRALLS
LEGHRYPGHSPRARARL
>AHV91497.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MKTAGLNLDHLRVLLDVMEQGSFSLAAERHGLSQPAVSQQVRQLERRFGLRLIERMGRRASATAAGTELATHLRGILAAV
DDADRAMQSLACGVAGRVRLGTGATACTYLLPALLANLRQRFPDLDIVVRVGNTVDLLRDIEDNRLDVGLLTMPIRARKL
LATPILKDEFVAIFPANAPAPAGRITPRLLMQRPLVLFEPGAQTRVLVDGWFGTAGLSAKPTMELGSTEAMKEIVGAGLG
CAVLPRMAVSAAGARASLTTRPLQPGLGASWPWSPGATSRSAAPCARCSTAC
>AHV91498.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MSAPRPLDGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARRYDERVRGQASHFIWTNRSKESLTLDLKKAEA
GQMMERLLAGADVLVQNLAPGAAARLGLSFDALRERFPRLIVCDISGYGEGGPYQDKKAYDLLIQSESGFVSVTGTADEP
VKAGCSISDIAAGMYAYSGILNALLLRGRTGQGSRVDVSMLESMVEWMGYPMYYAFEDAPPPPRAGASHATIYPYGPFPV
GDGKTIVLGLQNEREWKVFCDQVLLQPELAGDSRFASNSLRTANREVLRALIVQAFAALTIEEVSERLEAAQIANARVND
MKGVWDHPQLKARDNWREIDSPAGRIPSLLPPAHNSAFTPRMDAVPAIGENTDAVLASLGYAPDEVARLHSTEVV
>AHV91499.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MWSEDLPRQDAEIAVVWGPPAGLFERERKLRVVFNLGAGVDALFRLPTLPAELPIVRLEDAGMAVQMAEYAAHALVRASR
QFDQYEALQREGRWQPLPELDRSLWPVGVLGMGVMGARVASSLAALDYPVAGWSRSGKCPDGIQAFGGRDALDAFLGRTR
VLINTLPLTDDTHDLLCRETLSKLMPGAYLINMGRGAHLVEEDLLALLDSGQVAGATLDVFRTEPLPLGHPFWTHPRVTV
TPHVAAMSLRRETLAQVAAKIQAFIRGEPLSGLVSRERGY
>AHV91500.1 isocitrate lyase [Bordetella holmesii ATCC 51541]
MSQRDTDIRKLEQDWAENPRWKGIARAYKAEEVIRLRGSTQVEHTLARRGATRLWQSLHSEPFVNSLGALTGNQAMQQVK
AGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVLQVVRRINNSLARCDQIQWMEGKNPGDEGYVDYFAPIVADAEAGF
GGVLNAFELMKGMIEAGAAGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLVAARLAADVMGTPTLLLARTDADAADLVT
SDVDENDRPFITGERTVEGFFRTRAGIDQAISRGLAYAAYADLIWCETSTPNLEYARKFAEAIHRKYPGKLLAYNCSPSF
NWKKNIDDATIAKFQRELGAMGYKFQFITLAGFHSLNYGMFELAHGYARRQMSAFVELQQKEFAAAELGFTAVKHQREVG
TGYFDAVTQTIEGGRSSTTALTGSTEEAQFEHGEAQAA
>AHV91501.1 NADH dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MEWLNVLESQGQASLGPTAWLVIWTVIKIVCIAVPIILCVAYLTYWERKMIGWMHVRLGPTRVGFKGLLQPFADVFKLLT
KEVVVPSEANKILFIVAPVVTLMPALAAWAVVPFGPEAVLANVNAGLLYVMAITSVGVYGVIVAGWASNSKYAFLGALRA
SAQMVSYELAIGFVLVTVLLVSGSLNMNEIVLGQGRGWFAEHGLTFLSWNWLPLLPLFVIYVISAVAETNRHPFDVVEGE
SEIVAGHMVEYSGMAFALFFLGEYANMILLSAMASIMFLGGWMSPVDIAPFTWVPGWLWLGIKTFFVVSLFIWFRASFPR
YRYDQIMRLGWKIFIPLTGVWLVVVAVWMQTPWNIWR
>AHV91502.1 ATP-dependent DNA helicase RecG [Bordetella holmesii ATCC 51541]
MAAQAKAASRVASGRSDTERRLHNLGLVEPEDFVLHLPLRYEDETRVLPISAVRPGFSAQVEGEILRSEVLYRPRRQLTA
VIADESGELQLRWFNFYPSQQKQLTAGRRLRARGEVRGGLFGREMVHPRMTNADGALPEALTPVYPSTDGLAQPVLRRAV
TQALQRVDLHDTLPLAVRERYSLMPFDDAVRLLHAPAPGIPDTDLTERTHPAWQRIKFDELLAQQLSLAAARAARRDKRA
PCMSVNAAEGSLVARLYAALPFMLTGAQQRVVGEIAADLARPYPMHRLLQGDVGSGKTVVAALAAAQAISNGFQVAFIAP
TEILAEQHFRKLQAWLEPLGVSVAWMSGSLAAKVRRTTASAVQAGEVQLVVGTQALIQDGVHFFRLGLSIVDEQHRFGVG
QRLALSRKGEQAAGQIVPHQLSMSATPIPRTLAMTFFADLDVSVIDELPPGRTPVLTKLLSEARRDELIAHIAQAARSGR
QAYWVCPLVEESEALQLQTAVDTYEAMCVDLPDLRVGLVHGRLPQADKAAVMQAFRAGDVDLLVATTVIEVGVDVPNASL
MVIEHAERFGLAQLHQLRGRVGRGEAESVCVLLYQTPLSQVARERLRAMFETNDGFEIARRDLEQRGPGEFLGTRQSGMA
LLRFADIDRDVALAEAARDTAVYLRQHDPQAVHAHLGRWMRGREDFLRT
>AHV91503.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MVRWTDADGAERQARWQSESGAAVLTRIDVIDDRLPADVAYRKACEGTALLWRGDFQNARQLLQAMTRRMDKRPPKLAET
PRERFNQHRMWQGQRARTLGKLLIEIGTGHTLDLRRAPQIAPACEAAGVHAPCLMSLRELQGLLGAHEWHKKGVPVAALG
GQTIHPCYGVYSPVRGEYIDLVAQAPLPQGPIFDIGTGTGVLAAVLARRSPHPVVATDVDPRALKCARDNLQRLGLTGRV
RLEQTDLFPSDRAALVVCNPP
>AHV91504.1 4Fe-4S dicluster domain protein [Bordetella holmesii ATCC 51541]
MIATGAGVVTKRVAEAAERGGFVFAVDPTSAEASCVGGNIAMNAGGKKAVLWGTALDNLAWWRMVDPDGNWLEVTRLDHN
MGKIHDVEVARFEVRWFDGAAKAGEKLLRTEILEIPGRVFRKEGLGKDVTDKFLAGLPGVQKEGCDGLITSARWVVHRMP
RHTRTVCMEFFGQARDAIPSIVEVKGYLDGEGRERGAILAGLEHLDERYLRAVGYATKSKRGVLPKMVLIGDIVGDDDAA
VAAAASEVVRLANTRHGEGFVAVSAEARKKFWADRSRTAAIARHTNSFKINEDVVIPLNRMGEYTDEIERINIELSTRNK
LRLIDALDEYLAQPLPVGKPEDAEDAALTRAEVLAERTQQAVVLLADARRRWQWLLDNLDLPLAQAQAHLADIGLTSMAD
VFATRLQTQPQARVFDIVQDRTVRVSWKTEVLAGLQGIFSGAAAKPILDEIKSIHARVLKSRVFVALHMHAGDGNVHTNL
PVNSDDYGMLREAHEAVDRIMQIARDLDGVISGEHGIGLTKCEFLTHEELAPFQDYKRRVDPNGHFNAGKLMPGADLRHA
WTPSFSLMGHESLIMQQSDIGAISESVKDCLRCGKCKPVCVTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSLR
HWEEFEDVADHCTVCHKCYTPCPVDIDFGDVSMNMRALLRRMGRKSFNPGTAAAMFFLNAKDPATINATRKAMVGVGYKV
QRAAHDLLASVARKQTDHPPATVGKPALREQVVHFINKKMPGGLPKQTARKLLDIEDANYVPIIRDPKSTTADTEAVFYF
PGCGSERLFSQVGLATQAMLWHAGVQTVLPPGYLCCGYPQRGNGMTDKAEQIITDNRVLFHRMANTLNYLDIKTVVVSCG
TCYDQLAGYEFDKIFPGCRLIDIHEYLLEKGIKLDGVQGVRYMYHDPCHTPMKLQDPMKTVRSLVGEQAIKSDRCCGESG
TLAVSRPDISTQVRFRKQEELLKNRSAVSADGFDGEVKVLTSCPSCLQGLSRYEGDTSMQADYIVVEMARHILGASWMED
YVRRANTGGIERVLV
>AHV91505.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MGDIDYQALEFAYQACADQQAGAAAAHRVVIVGAGPVGLSTALDLARRGIRVIVLDDDCKLSSGSRAICFSKRTLEIWDR
LGVGQRMVDKGVSWNVGKVFFREGEVWRFDLLPESGHQRPPFAARALRGLAAQYPRRGSLRRRHVAR
>AHV91506.1 RNA polymerase-binding protein DksA [Bordetella holmesii ATCC 51541]
MATKAATKKSSKSTSDTAIDLPSEEELLAMPESDYMNERQLAFFKERLKQLEQDILANAGETTEHLRETQFVPDPADRAT
IEEEHALELRTRDRERKLLKKVQQAIARIDSGEYGWCEETGEPIGVPRLLARPTATLSLEAQERREMRQKLYGD
>AHV91507.1 pirin family protein [Bordetella holmesii ATCC 51541]
MSNLPPRGETSLDTIVVPRSSDLGGFEVRRALPSAQRRSIGPFVFLDEMGPAIFPAGTGMDVRPHPHIGLGTVTYLYDGS
IVHRDGKGHVQTILPGEVNWMTAGRGIVHSERSSPESRRAEQRIFGLQLWVGLTRACEETDPGFAHYGRQAQPVVEGEGV
RAQVVAGSLFGQTSQVNTLSPLFFGDVQMQAGACMELPAEYDERGAYLVQGRVEVDGQVFEAGRLLVFKEGCPILIRAHT
DARFAVLGGQALDGPRFIWWNFVSSSKERIEQAKDEWQRNRFGQIVPGDETEFIPLPVPRG
>AHV91508.1 calcineurin-like phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MNEIRPTHWRTLWISDVHLGSAGCKADFLLDFLEHNDCDTLYLVGDIVDGWQLRKHWHWPRAHNDVVQRILRKARNGTRV
IFVPGNHDEFAREFVGFAFGDIEILDEDVHTTANGRRLLVLHGDQFYGVIQHSKWLAHLGDNLYQTALWLNSHFNRLRHR
MGLHYWSLSQYLKHKVKNAVAFIDDFEQTLASEARRRGLDGVICGHIHKPAMRDVDGILYCNDGDWVESLSALAEDHDGE
LRLLDWASQLAERPAAAAPRRSLSLPALPSTLRRQGPPP
>AHV91509.1 glutathione S-transferase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MRILGKASSINVRKVLWTCDELRLWPCREEWGAGKRELDEPGFLALNPNAQIPVLVDGDFVLWESNSILRYLANQNGADW
LYPAAPRPRARVDQWMDWQASDLNSSWRYAFMALRRQAPAFQDAAQIQASCLAWTRAMGVLEARLHDTGAYVAGPAFSLA
DIVIGLSVQRWQATPWDKPALPAVAAYCARLAVRPGFSAYAEP
>AHV91510.1 putative integral membrane protein [Bordetella holmesii ATCC 51541]
MLGLGLGAGVGVGYQYALGPGRPAHMVMLTQAQVDAQDASLRQRETEARFLRAQLDTADGEIAVERAARQELETQLRTAQ
TEVGRVRDQLAFYEQ
>AHV91511.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MLNPVWLRSFATVVTSHSCSAAGRELGLTQSTISEHIRRLESNVGRRLLTRDTHTVALTPDGEAMLVHARVILEAMAHAE
SQFRSPRLRGRVRLGCSDDIALGPLPGILAAFRTAHPDVELQLTIAMTGKLYELLDAGAIDLLVGKRRPGDTRGTRLFSS
QMLWIARSGTEVDLDQPLPLVLAAEPSVSRSVVLDTLAMAGASWRIVCTSSSLAGSSAAARVAWD
>AHV91512.1 cupredoxin-like domain protein [Bordetella holmesii ATCC 51541]
MPAHADELPTFTLTFKPDGTFEPARLEVPAGRFKIELINESNEPVEFESIPLRKEKVLGPGVKSFVVITISRPGEYPFFD
DFHQNVKGTLVVKPKE
>AHV91513.1 hypothetical protein D560_0814 [Bordetella holmesii ATCC 51541]
MRADIFCRVVDNYGDIGVCWRLARRLHAGRGWQIRLWVDDLRAFARLQPEVDPTAARQQVQGIDVIRWGEHPDLLPGDVV
IEAFACDPPAGFVQAMRRSHPLPAWINLEYLSAEDWVESCHGLPSQRPDGLVKHFFFPGFTSATGG
>AHV91514.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91515.1 twin arginine-targeting translocase, TatA/E family protein [Bordetella holmesii ATCC 51541]
MGSFSIWHWLIVLVIVALIFGTKKLRNMGSDLGGAVKGFKEGMKDANGDKPEQVTQQRADDTIDVQAKEKHNS
>AHV91516.1 succinylglutamate desuccinylase / Aspartoacylase family protein [Bordetella holmesii ATCC 51541]
MSFPTRPFELARPNLDDERAGNTGTPGVWHFDSGLPGRQVLLTALIHGNELCGAWALKILLASGLMPRRGGLTLAFCNLA
AFDRFDPADYARSRFVDEDMNRVWSADKLAAGDSQERRRAGELLPWVERADWLLDFHSMSNANEPLQLSGLAARNVTLAR
ALGNPAYIVSDAGHAAGVRLRDYGRFAADGDPQTRSLLIECGFHGDTTSAAVALDIMARFLLASEIVSATDVPAKWLRPA
ANVPQALCVTDAVTARSNDFRFAHPWKGMEKLPQAGTVIGWSDGEPVTTPYDNCVLIMPSLANLRPGVTVLRLARPLA
>AHV91517.1 hypothetical protein D560_0448 [Bordetella holmesii ATCC 51541]
MDNYVYKDCAINRTGRVKLSLKQINFGLASLALALTSVQAVTAHAAETRPARDATGPG
>AHV91518.1 ATP-dependent protease La domain protein [Bordetella holmesii ATCC 51541]
MARIPLFPLGNILCPDGVLHLRVFEIRYLDMIKRCLEDRQPFGIVILLVGQEVRKPDALEVLAPVGTLARIEHWQQPDPA
LYELRCRGGQRIELADCERGRFGLWTGRMQAIDADPVVPVPGAMREAVGALGRLIAGLQQQGYGPAEMPVGAPYRLDEAG
WVADRWCELLPLAPAEKARLLGLRDPLARLSEVSRELAARGLI
>AHV91519.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MRILQLNFEKGWRGGERQTLYCMRAFRKAGHEVEILCREGGPLQARARAEGFTAHGVRNVPGQLVFLARHGRSFDLLHSQ
TANTNTWAVLTKPLHGRPVVFSRRTSFVVEPGEEWKTGFKWRHVDLLVAISEMAASEPRRLGIEPVIIRSAVEPHVIDEA
NVASLVQEYRLSGRKVLATSAALIRDKDPVTLVRAVGELARQRRDVVFLHFGAGGDREAEARAEVQKLGIGDVYLFTGFR
KGVEDFYSIMDVFVMASSEEALGSSVLDAFLQKVPVVSTDAGGLKESLADGRGVLVAVGDHQAMAAGMARCLDDLAFRAE
VTQRAYDYVRTEHDVTEMGRRYLAEFERLRR
>AHV91520.1 enoyl-(Acyl carrier) reductase family protein [Bordetella holmesii ATCC 51541]
MNNVLPGFIDSLPEKEDRRDRIPMGRYGRAEEVADLIAFLASEQSSYITGQNIRIDGGITRSV
>AHV91521.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MSAVMSSARPNPLLQALAKNRLSWVGIGLLLFIILAAVLAPWLAPHDPLQQNIAFRLEPPSAQFWLGTDSYGRDVLSRLI
YGARVSLLVGFVAIMIAMCIGSALGILAGYVGGVIDQVIMGLVDVLLSFSTLLLGLMIAAMLGASLENLIIAIAITEIAP
FVRVARAPTIALKQRDFVEAGRALGYGPLRLMGVHILPNMISDVVVLGSLWMASAIRTEASLSFIGLGVPPPAATWGSMI
REGFENILDAWWLTVFPSLAILLTVLALNLLGDALRDAIDPKLRSERS
>AHV91522.1 squalene synthase HpnD [Bordetella holmesii ATCC 51541]
MTPDEYCQEKAAKSGSSFYYAFLFLPPERRRAITALYAFCREVDDVVDESTDAQLARVKLGWWRTQIDAMFAGNPEHPVT
RALQPHLQPHGLSRQRLLAVIDGMEMDLDQTRYLDWPGLRKYCWHVAGVVGEMSAAIFGYSDDATLEYAAKLGLAFQLTN
IIRDVGDDARRGRIYLPINELQQFEVKASDILNGTYSDNFSALMAFETARARELYREAMQALPAADIRAQRPGLMMAAIY
YALLEEIERDNWQVLHQRISLTPLRKLWLAWKTWVGGGRGVVRRLGR
>AHV91523.1 periplasmic binding family protein [Bordetella holmesii ATCC 51541]
MSQYPGLRRWLAGAVLAASPFFVSVAEVAHAQGSTNVPPNPAKTVVMDLAVLDTLHTLGVDVAGVPSATKWPDHLAQYAD
KRYPKVGSMSEPDYEAIHRLGPDVIFVAGRSAPKYAELARLAPTVDLTVDPKDLVASVQRNTHTLAGIYGRQAQADEKLA
ALNASIAALRARAGQAGTGLIVLTTGGKMSAYGPGSRFGVIHDAFGVTPAARDLKVSNHGQAVSFEFISQVDPDWLFVID
RDAAIGREGTSANALLDNELVRQTKAWKNKHVVYLDAFNWYSLGAAGLTSLQQSVQEVDAALAK
>AHV91524.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91525.1 secretin and TonB N terminus short domain protein [Bordetella holmesii ATCC 51541]
MSVPALAQQTVPRSYQIEAAPLADALARYADQAGLTLLYEPSAVAGLKSPGLHGNYTPEQALARLLAGTPLVATRQGNGT
YVVRPAGNVPQLPPSPSKARARAPIPPGTRSPRGPNWTPPWPTAGATSANGWTRA
>AHV91526.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MALEADIIIENYRPGVLEKWGLGYEDLCSINPATIMVRLSGYGQTGPMRDQPGFGAIGESMDGLRYVSGHPDRAPLRVGI
SIGDSLAALHGVIGALMALRHRDATGGRWNGKTGEECQSGQGQMIDVALYESVFNVMESLVPEYDVAGVIRERTGGALPG
IVPSNTYTTADGQNIVIAGNGDAIFHRLMLAIGREDLARDPDLVHNDGRARRAAEIDGAIQAWCDRQTIDEALSQLRRAD
VPVSKIYSVADMFSDPQFLARGMIEQHRFPDGSPVKLPAVVPKMSLTPGSTRWLGPRLGEHTEAVLKSLGYDAAAIQELA
KTGAIST
>AHV91527.1 amidase family protein [Bordetella holmesii ATCC 51541]
MLPTLHEHMQALRTGRVTALDLTEAALERAQDPAGEGGRVFTRLYPQAARAQARAADALRAAGIERSPIDGLPISIKDLF
DVRGQTTMAGSIAREGEPPATADSDVVCRLVAAGAVIVGKTNMSEFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAA
VSVTDGMALAAIGSDTGGSVRIPAALCGLAGFKPSAWRVSMAGALPLSTSLDSIGPLASSVACCATLDAVLADDTALPAD
ALPLRGLRLALPTAIVLDDVDDTVAQAFDAALSTLSAAGALIERIDVPEFAQLAQINAKGGFTASEAYAWHRSLLARKGD
RYDPRVIARILRGKDMTAADYIDLLSARQIWVAGVDARIAHYDALVLPTVPQVAPAIAPLEASNEAFTRMNLTMLRNCTL
INFLDGCALSLPCQAPGEAPVGLMIASSNGNDRRVLFIGLAIEAALAAARG
>AHV91528.1 obg family GTPase CgtA [Bordetella holmesii ATCC 51541]
MKFVDEATIEVIAGKGGNGVASFRREKFIPRGGPDGGDGGRGGSIFAVADRNINTLIDFRYARLHRAKNGENGRGSDQYG
AAAPDIMLRVPVGTVVHDAETGEILFDLNRHGEQVTLAAGGQGGMGNIHFKSSVNRAPRQWTPGKEGDQRKLRLELKVLA
DVGLLGLPNAGKSTLISRISNARPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGASEGAGLGHLFLRHLARTRV
LLHLVDVSSPDPDFDPVDDAVQNARAIVEELRRYDPELADKPRWLVLNKLDMVPDPEDMQKRFCAAFGWTGPVFGISGLN
GEGTQELIWALQDYLDAEKQKDQIDQDKADGSFVHEDPRFDTTRATPPGGHE
>AHV91529.1 hypothetical protein D560_0277 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSIAQQ
>AHV91530.1 hypothetical protein D560_1054 [Bordetella holmesii ATCC 51541]
MQGCQAGISLGGVQGGQSREMHVGGRAAPEPGRPASGDRGNRVGEASL
>AHV91531.1 putative thioredoxin [Bordetella holmesii ATCC 51541]
MDQTDIDDGTADRSLLDAPGISLVVFHSQGCPNCRVARERLPRFELPAERIFWVDAGRNGGLVERYEVFHLPAIHVVRDG
AYYGPISAQLADWDLRQQIAQALDNHPAELP
>AHV91532.1 hypothetical protein D560_1252 [Bordetella holmesii ATCC 51541]
MADRIRHAQDILGQAMGVENSTWYTNVGEMCEAQFLAEVADRADCAIVLDLNNIDVNHKNHGGHDIEGYVSHIDLSRVSY
LHVAGHEFDPRFGMYVDTHSRGVSASTAQWALRLHEHHGLPILLEWDNDIPGVQEINRELECLQRFMTTSEV
>AHV91533.1 hypothetical protein D560_3241 [Bordetella holmesii ATCC 51541]
MKQKFASILLVGALSASATLAMAQPGPGRGPDGGSGNQGPGRSPEGGPERQGPG
>AHV91534.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MEQVVQAFARAIEQQVLRPGMPVASVREFAREHGLSTFTVASAYNRLVAQGWLAARPGSGYRVLAAARPAAPRPAAWAPP
RLNTDWLLSDIYADHSIPIKAGCGWLPGEWLNEEGLHLALRHMGRVPALRISGYGHPQGYAPLRESVAAAMAQHGLQADP
DQVVLTQGVTHGLDVVIRTLLRPGDTVMVEQPCYANLLQLLRLAGMRTVAVPRGESGLDLEVLEAAVRDHQPRALFVNTV
LQNPCGMSLSMANAFRLLQSANRHDYWIVEDDISRELQPQLAPLLAALDGAERVVYLGGYSKIISPSVRVGYLIAHHDLA
RDLARTKMAVGLTSPEIMERVVHQVVREGRLRAHILRTRERLAQAHAQVMRQMDDCGLEVAARPQAGLFLWARLPGHGQG
ALAVAEAALRDGIWLAPGCYFDAGQADTPWLRFNVAYAGQPVLWRFMRRACA
>AHV91535.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase [Bordetella holmesii ATCC 51541]
MLLIPAIDLKDGRCVRLRQGDLDDATVFSEDPAAMASHWLAQGARRLHLVDLNGAVAGKPKNEAPINAILDAVGDDIPVQ
IGGGIRDLDTIERYLDAGISYVIIGTAAVKNPGFLHDACGAFPGQIIVGLDARDGKIATDGWSKLTRHDVLDLAKKFEDY
GCEAIIYTDIGRDGMLSGVNVESTVRLAQHVRIPVYASGGIAGLPDIEALCAVEPDGVEGAILGRSIYEGTLDFQTAQTR
ADELTK
>AHV91536.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MITSFPKDLTQVYKAAFEKANPGITVEILNKDTVSGIAFVRETPAGQRPEVFWASAPDAFEVLGRDKLLAKAPDVLNKAV
PDKIGNYPINDPSGLYMGQALTGYGIMYNTRYIKANKLPAPVEWKDLLAAQWFGHVGITAPRVPAPCI
>AHV91537.1 ribosomal protein L14 [Bordetella holmesii ATCC 51541]
MIQMQTTLDVADNTGARAVMCIKVLGGSKRRYAGIGDIIKVSVKDAAPRGRVKKGEIYNAVVVRTAKGVRRKDGSLIRFG
GNAAVLLNAKLEPIGTRIFGPVTRELRTEKFMKIVSLAPEVL
>AHV91538.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91539.1 hypothetical protein D560_3328 [Bordetella holmesii ATCC 51541]
MSMYLRAIGARSAFGMPRIFRPNSTFSYTVRQGKSAYC
>AHV91540.1 DNA-binding protein, YbaB/EbfC family [Bordetella holmesii ATCC 51541]
MMKGQLAGLMRQAQQMQENMKKAQEALADILVEGAAGGGLVKVTMTCRNDVKRVAIDPSLLADDKDMLEDLVAAALNDAL
RKAEATSQEKMSSLTAGLPLPPGMKLPF
>AHV91541.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPVFLDEPFISA
>AHV91542.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MKTIDEIQRAHGDLTALRRDIHAHPELAFQETRTSTLVAERLRALGLEVHTGLGKTGVVGVLRAGSSKRSVGLRADMDAL
PMPEHNRFEHKSTIAGRMHGCGHDGHTAILLGAAQYLAAHPDFDGTVNFIFQPAEEGGNAGARAMMEDGLFERFPCDAVF
GLHNMPGMPVNQFGFRTGPTMASSNRWDIVIKGLGGHAAQPHVAVDPIVIASEMVQALQTVISRGRNPLDPAVLSITQIH
AGDAYNVIPGEAVLRGTVRTYTLEALDKIEADMRRIATTLPQVYGGSGELDFVRAYPPLVNWENETAFATRVAQDVFGAE
NVNPQVPQFMGAEDFSFFLEKVPGCYLFLGNGDGDHRLESYHGMGPCQLHNPNYDFNDALLPVGATYWVKLVQAFLPIA
>AHV91543.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MRIEDAEVFLKLAEHQNVRRTAERVGLTQSAVTKVLQRLEAEFGLPLMERRASGVVPTRAGQLLQEKALALIGSYDSLRH
EMAAAQSAQQSVVRVGIIPALLDAKLLPVLAIWRKQHPGQFLQISVKVSDELTEMVCQGDLDLAIGFAPTPRSDLQTLAL
GPQRYHVVVRAGHPLSLPGRSTMQALAQAEWLLPAPSVGMRLWVERAFIDLGLPIPVTAVQTDTSTAQFAGLIRASNLVT
ALMTPMFMSPAGKGLVELPFDAESSMQPLVLLTRRAAYLSPTTRALRDALHRAFIAST
>AHV91544.1 cell division protein FtsL [Bordetella holmesii ATCC 51541]
MGRASLIVAALLMLSAISLVTSRYQARQLYIELGRGQAEARDLDTNWRRLQLERAELARNARVDRAAREDLKMIPIVPDR
TIYMVQPAPIVGGAQ
>AHV91545.1 EPSP synthase family protein [Bordetella holmesii ATCC 51541]
MTAAAMALFADGPCRLRNIGSWRVKETDRIHAMQTELAKLGATVEYGPDWLTIAPPADGQWRDAQIGTWDDHRMAMCFSL
AAFGPAVVRILDPGCVSKTFPNYFDVYASLISA
>AHV91546.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIP
LRGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV91547.1 hypothetical protein D560_0890 [Bordetella holmesii ATCC 51541]
MNLLSILVLAFAMSTDAFAAAVSKGAALHKPRFSEALRTGLIFGVIDAITPVIGWALGSIAATFIADWDHWIAFGMLCVL
GVMMIRNGLSGPQEEAAPPSRHGFWLLAATGFATSIDAMAVGVSLAFIDTNIVLTAIAIGLATRTMVTLDVMLGRVLGAM
AGKRAEILGGVALIGIGSTILYEHLSATAG
>AHV91548.1 hypothetical protein D560_1743 [Bordetella holmesii ATCC 51541]
MQTPVNRKLRGQAALVASVLGIAALGSAHAQDRSPTSTLRLVSETPYPAANRGVHLAPLSAQELRDLAVDAYVYAYPMVL
MEVTRRQTTNVQSPVAGRAPMNQFGHRTSMPDARTADVAWPSTDTLYSSLWYDVSTDPLIVQVPDAGERFVMLNLLDMWT
DSFATRGTRANGRGPQTFAIVGPSWQGTLPAGVDLVRSPTATGWLIGRVQAGGANDAQAMSQFQAGLSATPLNQYGRSHG
FVANGPVNTTWNTQGTPAEQVANMDAATFFTLFSELVRNNPPHANDYPMLDRLRRIGIGDRPLVFGQLEPVVQQALNEAQ
PLAGRRIADGVGRLSTQANNWNTVLSGIGTYGTDYLRRASVAYAGLGASPPEEVIYPVTGADNKGRALESGRDYVLHFDK
GQLPPVDGFWSINLYDARQGFAENSANRYTLRSSDPLKYNSDGSLDIYIRRDHPGESRMANWLPAPREGNFLVNMRLYAP
NNIALDGQWAPPPIVRD
>AHV91549.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MNHSLFKHAVACACLSILGSAALAAGYPSNPVSLVVGYGAGGGTDVCNRVLANDVGKQLGQTVIIENRPGAGSSLSVSYI
TRQRPDGYSIASLSTGGVLNQVLNPGNKYDVTKELTPVAMVAQYQVGLLVRADSPYKTLADLIAAAKRGKTAMSYSTAGI
GTPQHLTTERLAQAIGTQWVHVPYKSGPESISALLRGDVDFMAQTAEWVPYVRDGRLRLLSVYTDERMPGFDAPTLKEQG
YDLVAPSLLGIVGPAGMDAAHVKRLQDAFDVATRTPEFANCADQFGLKVDFRDAAAFGRYVNDTLVGWTPLLQQFAGKE
>AHV91550.1 motA/TolQ/ExbB proton channel family protein [Bordetella holmesii ATCC 51541]
MFNVLQNAMMVVAQAAGSAAPAAATPPAAPQTLQPAADALNAAAAAAASAPPPAPAVPDMGFMHFVAQSDFVGKTLFIIL
ILMSVVTWYLIVVKAISNVRMRNRAAVFLNHFWNAGSLKQVENEIVTHGARDPFSHLASHAIHAQSHHAKFGATKLEEAG
SNGEFVTRTMRKVIDEETAKLENGLTILASVGSTAPFVGLFGTVWGVYHALVGIGLSDGVTISRIAGPVGEALIMTGLGL
AVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLTTGQQVAVSDGKVRALRRQGGQAADARGSE
>AHV91551.1 siderophore-interacting FAD-binding domain protein [Bordetella holmesii ATCC 51541]
MTRPNLHVERVRHTLKLRQLTVSRVEHLAAGLLARITFSGEDLHDFVSASFDDHVKVFFPSVPGQAVVLPEVGTDGVRFA
EGQPRPAARDYTPRHFNRDTGELVLDFVLHGEGPAGSWAAQAQVGQQLAIGGPRGSFVVPPEFDWHVLIGDETALPAIAR
RLEELPASTQALVLMEVPSHTNQLPLTSAARLQVRWLARDAGIRAWPTLPRRCNCPPEKAICGWPPSPPSPRRYVPAWSS
STASTKTASEPRATGSAAPWPCTNPTTIERGARRRPSIPGLLLARVFAYAL
>AHV91552.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MDELARRSQVSRATLSRLENAEVSPTTQVLGRLCATFEITLSRLLRMVEEEFPAFVPLSAQAVWRDTGFVRRSVSPPARN
LAGEVLACELVAGTCINYDAPPRPGLEHHLVLVQGDLEMTVDGRLHHLAPGDCLRYQLYGASRFLTQTGAHYFLFLL
>AHV91553.1 hypothetical protein D560_1498 [Bordetella holmesii ATCC 51541]
MSAIDDFRPGVYRHYKGQHYLALGLARADETDDIVVVYVRLYPRDGLPMNTRLLRIWNETVGSEAGDVPRFSYVGPASPA
A
>AHV91554.1 hypothetical protein D560_0456 [Bordetella holmesii ATCC 51541]
MVLQGHDLSPVGRSGARLLWMPGAGRASEAILRKIANVGNGNV
>AHV91555.1 lytic murein transglycosylase family protein [Bordetella holmesii ATCC 51541]
MKTFPILLAAATMMAAGPSHAETSAEDLAAYRQCLTELRAKAPQAGVSAATYDRYTKDLTPDMDVIGLLDAQPEFKTPIW
DYMAGLVDAQRVEDGRQGLEQWRQVLSRAQNEFGVDPATVVAVWGVESNFGKNLGGRPLLTSLSTLSCFGRRQSYFRGEF
LATLRIVQDEHVNLDRLKGSWAGAFGQTQFMPSIYLRLAVDFDGDGRRDLIDSVPDALGSTANFLKRAGWNSALPWGFEV
TLPEGLDTSAAGRRNKQPMSAWGARGIKRADGKPLPSGDTPVGLLLPAGPEGPAFLVARNFDALYSYNAAESYALAIAHL
SDRLRGGLPFAHAWPTDDPGLSRAERKEIQELLVARGYDIGTPDGVIGTRTRQALQTVQRELGLPDDGRAGQKTLKALRA
QR
>AHV91556.1 hypothetical protein D560_3519 [Bordetella holmesii ATCC 51541]
MQFVQRVSGKPDEPSDEMVAIIGYSLLAKRFCQRLLLP
>AHV91557.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MSRSPFAGAAPLAHRPLNAIAATAGGGVPQARIKRLLGDLFAPLQALHDRGRICGDITTSSVGLDENGRAHLMAVDTQPR
QLDGVAPTTAAGFAPYEFYLQSSQWPRGPWSDIYSLCAVSHSLITGSLPAPAMERIEHDSYAPLAHQGLRHYDLEFLQAI
DAGLALRPPDRPQSVAAFADSLAFSPAVDAADLALIPPLTLRASSPRTEYVAVQPAISHPRRLVFWTVLVLVAAAVGWYW
WDQRSATPSPVIAHSQLALNAAPPEPVSPGAKPAPVASATTPAPDPAADAARAATPPAAVISSPGELLQKPSTSAARVAV
AVHIEPWGEVWIDGVHRGVSPPLRELKLAPGKYNVVVRNADLSPYRATLEVKPGSSASIRHIFP
>AHV91558.1 tripartite tricarboxylate transporter TctB family protein [Bordetella holmesii ATCC 51541]
MQLRNRQDFWSGVMFIIFGLGFSWQASSYQMGTAARMGPGYFPFWLGLVLALLGAIVLIGSLSKKATETHVDRFDWRIVF
LVIGSVIVYALVLKLLGVYIAVFLLVVLSSLASHEFSLKVALANGVFLVVFTYLAFIKGLGLIFPLWPSFI
>AHV91559.1 aconitase family protein [Bordetella holmesii ATCC 51541]
MPQNTLDTLKSFKIGKKTCQYYSLPALGKSLGVDISRLPVSIRVVLESVLRNCDGQKVTEEHIRQLANWQPNAKREDEIP
FVVARVVLQDFTGVPLLADIAAMRSVAETMGKSPKSIEPLVPVDLVVDHSVMIDYFGTKNALDLNMKLEFQRNRERYQFM
KWGMQAFDTFGVVPPGFGIVHQVNLEYLARGVHQDKKTGVYYPDSLVGTDSHTTMINGIGVVGWGVGGIEAEAGMLGQPV
YFLTPDVVGVELKGQLRGGVTATDLVLTITEMLRREKVVGKFVEFCGEGTASLSVTDRATIGNMAPEYGATMGFFPVDDR
TIDYFKGTGRTEEEIAAFQAYFKAQKMYGVPKASEINFSKLLTLDLSTVAPSLAGPKRPQDRIEIGNVKNTFIDLFSKPI
AENGFNQPAQKLSEVFTTSTGTKLKNGDILIAAITSCTNTSNPSVLLAAGLLAKKAVEAGLKVPKHIKTSLAPGSRVVTE
YLTKTGLLPYLEKLGFDIAAYGCTTCIGNAGDLTPDLNEAITSNDLICAAVLSGNRNFEARIHPNIKANFLASPPLVVAY
ALAGTMTRDLMTEPVGRGKHGDVWLGDIWPSTEEIDALLKFAMNPKAFQANYSQVKSNPGKLWENIKGVSGDTYNWPDST
YIAEPPFFQDFSMTPGSIPVIKGAPRAGRFW
>AHV91560.1 hypothetical protein D560_0867 [Bordetella holmesii ATCC 51541]
MKAFKTSYVQVLTAGYRLTSDDAMPTHGLRRRIHRAGCRRGVALVRRACCSVPTAYG
>AHV91561.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MSTTLLQALIGGLTMGGIYALIALGFSLTYTTTRTLNFAQGDFVSVGAFVGLAAVGLVASALAIDPATSPWAYVLAVLAA
FPNGLFGKTLVEKV
>AHV91562.1 hxlR-like helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MGEAITHFKVPVTPEERAACLGVDGSVAQVTRALRMLSGRWKLPILFRLFAEPSWRTAHLLRDMPGLSAKMLTQHLRQLE
RDGLVARRDFGSQPPHVEYSLTDAGRALMPVLMALREFARRQA
>AHV91563.1 gram-negative porin family protein [Bordetella holmesii ATCC 51541]
MKRYAIAFAGLCIAPAIHAETNVTLYGIADASLRYLSTSNGATQVNSSRFSMENGAISNSRWGLRGVEDLGNGMSAFFRL
ESGFNLQNGQQSDSGRLFNRHAYVGLDGGQWGAISLGRQDTPLFTILADSYDPLTVGNYAENSWLPVAMSRARSSDSVRY
RNAKLGGLDFIVSYAFGNDFADHRLGKQVGTALTYTTGPFSLGGGYQKTYSESNSDYRQQVWNLNASYQLDTVKLFAGYF
NGRDETGWVNAVVGNAVPATGLDRKDNGYFLGATWQATGSWALTGAAYYDVAKNIQVDGDKGKRLALVGVAEYSLSKRTQ
LYGTVDYNKVYDASSVDIAGQSSQVGAAVGIRHIF
>AHV91564.1 stringent starvation B family protein [Bordetella holmesii ATCC 51541]
MGETSTKPYLIRALHEWCTDNGYTPYLTVQVDEHTRVPMAHVRDGQITLNVGTLATNKLLLGNEYIEFQARFSGVTETVM
VPVAAVSAIYARETGAGMGFEVQPYEPPVREDAPEEGEAVDSGDAPEADEEAGADTKRPHLTIVK
>AHV91565.1 phosphoenolpyruvate-protein phosphotransferase [Bordetella holmesii ATCC 51541]
MSDDGVGLANPVLSLFGKGVARGYAIGRAVVMGAAALEVAHYRIAAEDVGAECHRLTQALVQAQADLLELADSLPEDAPR
ELGAMLNVHRLLIGDPLLAEQARTMIAERFYNAEWALTAQGQILSEQFDAMEDEYLRERGGDVRQVIERVLQVLSGTSTL
LPDGSSVDGDDALVVVAHDISPADMLRLRGGRFAAFVTDLGGPTSHTAIVARSMGVPAVVAMGNARELVRDGDVLIVDGA
SGVLVVNPSAAILDEYRARQCAYAQERAELALLRDVPAITLDGIDVKLEANIELPEEAALALASGADAIGLFRSEFLFMG
RADLPGEEEQYHAYVSVVRTMAGRPVTIRTLDIGSDKTLDGEATVATNPALGQRAIRYCLARPDMFASQLRAILRASAHG
PVRMLVPMIAHMHEVKAVYAALDAARRELDLRGQAYAAKMEVGAMVEVPAMAIAIEPFAQALDFLSIGTNDLIQYTLAID
RGDHDVAGLYDPLHPAVLRLIAATINAGERAGKPVAVCGEMAGDARLTRLLLGLGLKEFSMHPQQLLDVKREVRRAHSNA
LRVKVASVINRALPVDLDHLEQA
>AHV91566.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSAPRVGFIGVGSMGWPMAHQLHQAGFPLTVFDAAPGQAGRFAAEVGGQAAADCQTLARQSDIIVTMLPTSAIVEQVLSG
ADGVLAGLQPGTIIVEMSSGVPAHTQRLAALVGAAGGELVDAPVSGGVPRARTGELAIMFGGEAATLERVRTLLQTMGSS
VVHTGTVGSAHAMKALNNLVSAGGFLIGVEAMLIGQQFGLDPDVIVDVLNASTGMNNSTQKKFKQFVLSRAFNSGFGLDL
MVKDLGIALGMADDTGTPTPFAALCRQMWASAGKSLGQGQDHTAVARLSESLAGIELKPKA
>AHV91567.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91568.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MVLVTNITYYMLLTYMPTYLSNSLGYSESHGVLIIVVVMIGMLFVQPVVGFMSDKVGRRPFLLIGSIGVLVLAIPSFGMI
ASDNIGLIFGSSRNSVEPCLIAVTLDP
>AHV91569.1 3-hydroxyisobutyrate dehydrogenase [Bordetella holmesii ATCC 51541]
MQRIGFIGLGAMGLPMAVNLLAKGYPVIGFDTQDRPAFVQAGGRVTGTVKDLVAEANIIITMLPNGPAVLEVAESQVLAH
ARRGQVLIDCSTIGVPSARKLHAMAADRGVAVLDAPVTGGVAGAQAGTLTIMVGGDETVFAGMRDVLLSMGSKLVYAGAA
GNGQAVKICNNMAAGIIKIAISEAFVLARQLGVDEKIFFEVAAAGSAQSFALTRTCPVPGLVENSPSSRDYTNGFATNLM
LKDMVLAQEAAMASGAATVLGGAATHLYQLCANAGLGERDNGIIYQYLSGKSA
>AHV91570.1 ACT domain protein [Bordetella holmesii ATCC 51541]
MSEADIEHAIVVLLEIEKTVVEGAGAAGLAALLLEKSRGNTYFKGKRIGLVLTGGNIDPLMLGELIERGMVRAGRLARIR
VDLRDLPGALAHATRLIADVHANITEVHHQRAFTALPVRNVEVDFVLQTRGPEHIAQVISVLNDAGFAASNHDH
>AHV91571.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKIIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91572.1 C4-dicarboxylate transport transcriptional regulatory protein dctD [Bordetella holmesii ATCC 51541]
MVDDDPDALRACLQTLQMRGFSVRGFSSALLALPHINRDFGGVVVTDVRMPGMDGISFLLRLRDIDADIPVILVTGHGDI
AMAVQAMRDGAYDFLAKPYPADLLLAAIDRAAEKCRLVLSNRQLREAAAHAMDEDIPFIGVTPAMQRIKQTLRQIADADV
DVLIEGETGTGKEVVATMLHRLSHRRDHPLVAINCGALPETVIESELFGHEPGAFTGAQKKRIGRIEYASGGTLFLDEIE
SMPLALQVKLLRVLEGRQVAPLGTNEVRSVDLRVVAATKTDLSAEAMRASFREDLFYRLNVVTLHLPPLRERRADIALLF
AHFTAQAARRFHREAPAITEDVRHHLATHRWPGNIRELAHFAERFVLGGLNPPVSQSHPEPGLSLPQRMEQFEAQIIRQT
LASHRGEVKATMAALGLPRKTFYDKLQRHGIDRQDYASADSGTQ
>AHV91573.1 phenylacetic acid degradation protein paaC [Bordetella holmesii ATCC 51541]
MDKQLFEYLLRLGDTSLILSQRLSEWCGHGPVLEEDLALTNTALDLLGQARMWLTLAGEVEGQGRDEDQLAYLRDTHQFR
NCLLVEQPNGHYGDTMARQFLFDVWHYFLLQRLMQSKDERIAGIAAKAIKEVTYHVRRSSDLVVRLGDGSDESHRRMQEA
IQSAWTFAGELFADDDVDQDLVSRGIAVERASLFQPWLAHVSEVLEEASLTVPQEREAFHLLRRGGLQGRHTEALGYVLA
EMQHLQRTYPGARW
>AHV91574.1 hypothetical protein D560_2024 [Bordetella holmesii ATCC 51541]
MHALLDLGKQLIELSPERLRQLPIEERLYEAIREAQRTTSREGLRRQTHFVGKLMRAAPADEIRHQLDVWENGSREETAS
MHRLEGLRERLIQDDNALTELLERYPVADVQHLRAVIRAARKEAQHNTALLQGQEPQRKQYRALFQALKSLTK
>AHV91575.1 yaeQ family protein [Bordetella holmesii ATCC 51541]
MALRATIYKADLNIADTDRHYYGSHGLTVARHPSETDELMMVRLAAFAMHADETLAFTKGLSDTDEPDIWSKDLTGAISL
WIEVGQPEERRILRACGRADQVVIYCYGGHASQIWWEGVRGKVERARNLQVVNLPSHQTQALAALAERGMQINVNISDQT
VYVSAAEGEVALEPEIWRQARD
>AHV91576.1 porphobilinogen deaminase [Bordetella holmesii ATCC 51541]
MSLPQRLVIATRASRLAIWQAEHVRDRLRALYPACAVELLTLTTRGDQILDRTLSKVGGKGLFVKELENALLDGRADLAV
HSLKDVPVELLSPFVLSAVLERADPRDAFVSNQHESLATLPSAAIVGTSSLRREAQIRAARPDLVVKPLRGNLDTRLGKL
DQGEYDAIILAAAGLERIGYGNRIRARLSPEQSLPAAGQGALGIEIRDDRDDLRAWLAPLASPGTAACVSAERAVSRMLG
GSCQVPLAAYAELHGPDLRIQALVSSIDGVRRVRSERVGPSGQAEQLGQAVAQDLLDNGAGDILAELLQDPQ
>AHV91577.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91578.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MKAPNFGAALLRYRFAVASRAVAAIGGGYLLASAAAACLAAYVARRCRGNGADAVVRGLCLRGHLGLRHL
>AHV91579.1 multidrug resistance protein MexB [Bordetella holmesii ATCC 51541]
MAKFFIDRPVFAWVIAIVLMMAGALSILSLPVAQYPSIAPPAIAINVTYPGASAQTVQDTVVQVIEQQMNGIDNLEYISS
ESNSDGSVSITLTFGQGTNPDTAQVQVQNKLAVAQPLLPQEVQQQGIRVTKATKNFLIVAGFVSSDGTMDKSDLADYVAS
YVQDPISRTPGVGDFQLFGASYAMRIWLSPEKLINYNLSASDVTNAIKEQNVQVSSGQLGSLPATRGQQLNATVIGPTRL
QTPEEFGDILLKVNTDGSQVRLRDVAKIELGAQGYSIDSYYNGKPASGLAVKLATGANALDTAQAVRDTINNLKPYFPPG
MEVVYPYDTTPFVSLSIESVIHTLLEAIVLVFLVMYLFLQNVRATLIPTLAVPVVLLGTFGVLAAFGYSINTLTMFGMVL
AIGLLVDDAIVVVENVERLMVEEGLSPKAATRKSMGQITGALVGIAMVLSAVFIPMAFFGGSTGVIYRQFSITIVSSMVL
SVLVAVVFTPALCATLLKPVPKGHHGTKKGFFGWFNRSFERSTEGYANVVGRSLTRGKRLLVLYVVLILAMGWLFTRIPT
AFLPEEDLGILFAQVQAPSGASAERTKVVIDQAVNYLLNDEKDSVASVFAVSGFSFGGRGQNAAILFIKLRDWKNRSGSS
LRAGAVAQRINGYFATHIHDAQVFAFAPPAVMELGNASGFDFMLQDRAGVGHEKLLAARNQLLGEASQSPVLARVRPNGI
EDAPQYQLDIDREKARALGVAISDINSTLSTAWGSSYVNDFIDRGRVKKVFVQGEAASRMLPDDLDKWYVRNTSGDMVPF
SAFAKAHWTFGPQKLNRYNGVPAYNIQGEPAPGRSSGEAMAEMERIAAKLPTGIGFEWTGLSFEERLSGAQAPALYAISL
IVVFLCLAALYESWSIPTAVMLVVPLGVLGALAATLMRGLSNDVYFQVGLLTTVGLAAKNAILIVEFAKEHYEKGAGLTE
AAIHAARQRLRPILMTSMAFVLGVVPLAISSGAGSGSQHAIGTGVIGGMLSGTFLAIFFVPLFFVVILRLFKVRRRADIH
AEEEALHPHSNGDQPQ
>AHV91580.1 hypothetical protein D560_2232 [Bordetella holmesii ATCC 51541]
MNQTLAVWLLIALAFISANLPFLTDRVFAVFPLKNGKPVAIRFLELLVYYLIVGLAGHAFESALGNSFTQAWEFYAITLS
LYVVLAFPGFVYRYLYQRGRNRPA
>AHV91581.1 4-oxalomesaconate hydratase [Bordetella holmesii ATCC 51541]
MVEYGIPAMVHVSTSCNACFHTTGAHYLNADTTAFMQCLTSDLFKVFPQLNFVIPHGGGAVPYHWGRFRGLAQEMKKPPL
EDWLLDNVYFDTCVYHQPGIDLLARVIPVKNVLFASEMIGAVRGIDPQTGFHYDDTRRYIEAADLSAEDRFQIYEGNTRR
VYPRLDAALKRKGL
>AHV91582.1 hhH-GPD superbase excision DNA repair family protein [Bordetella holmesii ATCC 51541]
MSSTDLELVKPDYWEEAVAHLMRRDRILKKIIPQHSHTWLSSRGTPFVTLARAIIGQQISTKAADALWARLLEVAGKRPT
PATVLRAGVAGLRAAGLSQRKAEYVQDLADHFGQRKVHPERWATMDDEAVISELVAIRGIGRWTAEMFLIFNLQRPDVLP
LDDLGLLKAISLHYFSGEPVSRFEAREVSLAWQPWRTVATWYLWRSLEPTPVQY
>AHV91583.1 hypothetical protein D560_2098 [Bordetella holmesii ATCC 51541]
MRNVCEPDRSSARQRHIICRLLRAVCVTAAGLASDQALLNAQAG
>AHV91584.1 helix-turn-helix domain, rpiR family protein [Bordetella holmesii ATCC 51541]
MSKAAASIADRIARAQPSFSRTQHRMADYVLAHPFRVATMTIDEFAAAAGVSVATANRFARALDLPGYPQFRAELARGFE
AALEPVEKLRLELAHSASAVQIFAATLQEDIQNAQRTLQSLDESACERAVISILQAERVFIIGFGASGYLAGLLQRGLCM
HVHSVESLAGPGGVSHAARQMSRMTERDLVIAIAYPRYLADTVTLARAAQQAGVPVLVLTDRPTSPLAPCATVALYAPSA
RQFSSNAETAALGLIEALSAAVAHRAKDSIEAAVGVTQSVMPWLIHGVAGTGKR
>AHV91585.1 putative mg(2+) transport ATPase protein c [Bordetella holmesii ATCC 51541]
MMLEAVAAALFVLAANTLLRPVVSYVNRQPVEPQHTEVNTVIHLITGAGQQQQALARLEEVLQAEQLPLSELSIDQFGDS
DVEIEATLAEAAIEDKDLDRVAAILAASPAIRQAFWSANTV
>AHV91586.1 NUDIX domain protein [Bordetella holmesii ATCC 51541]
MLDREGYRPNVGIILVNGKNEVFWGKRIREHAWQFPQGGIKYGESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVP
DHFVRREWRGHYKGQKQIWFLLRLVGRDSDVCLRSTQHPEFDAWRWSQYWVPLDAVIEFKRDVYTQALNELATILFRRHH
ETRYLRQRVHGPRSSDNSAETDGHAHIAG
>AHV91587.1 sulfate ABC transporter, ATP-binding family protein [Bordetella holmesii ATCC 51541]
MSIEVKNLSKRFNDFRALDNVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADSGSVLFSGEDATAVDVRQRQVGFVF
QHYALFKHMTVFENVAFGLRVKHRSQRPSEAQIRVKVRELLQLVQLDWLADRYPAQLSGGQRQRIALARALAVEPRVLLL
DEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVSDRVVLMNAGRIEQIGSPREVWEAPATPFVYGFLGDV
NQLAGQASEGIWRHADLALPAPGLDQPGLLAATAYVRPHEIDVVRYAPQAPGIPVRLAHAYLAGPSAYLELTREDAATAI
EAEVPEHVFRELNLKEGDALLARPRRARVFATQP
>AHV91588.1 hypothetical protein D560_2247 [Bordetella holmesii ATCC 51541]
MWLREIGIEKTWLRTPEHEAAPASAGIEPAIERVVVDPPHPWPGPRP
>AHV91589.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQVRIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHI
>AHV91590.1 chaC-like family protein [Bordetella holmesii ATCC 51541]
MLRGHHRALCLWSRVNRGTPECPGLVFGLDRGGSCRGVVYRLAGAQVPEYFPALWDREMSTGAYLPRWINCQTETGPVQA
LVFIMNRANPAYIRALPEDEVLAIVRRAAGRYGPCTDYVVETARALRAAGIHDARLEGLARHLERDPRQTPAI
>AHV91591.1 N-acetyl-gamma-glutamyl-phosphate reductase [Bordetella holmesii ATCC 51541]
MTQTLVFIDGDQGTTGLQIHERLRGREDLNLITLPAAERKDSVRRAEAINQCDIAILCLPDAAAREAVGAIRNPAVRVLD
ASSAHRLSQGWEYGFAEWKPGQAERIAQASRVSNPGCYPTGAIGLLAPLIAAGLVPADYPLTVHAVSGYSGMGRAGVDDY
EGPGAAQALPYAAYGLTLAHKHTPEIQRYAGLTERPVFTPAYGAYRQGIVLTIALQRRLLPAGVDGAALRACLAHHYAAS
PSLRVSADGQSPERLDPRVANGSNDLYLHVYENAEHGQILLAAVFDNLGKGASGAAVQNLDLMLQGAAGRGA
>AHV91592.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRCQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91593.1 ribosomal protein L6 [Bordetella holmesii ATCC 51541]
MSRIAKYPVELPKGVEASIQQDQITVKGPLGTLVQSLTGDVNVVQDDGKLTFAVANDTRHANAMSGTVRALVANMVTGVS
KGFERKLTLVGVGYRASVQGDAVKLQLGFSHDVLHKLPAGVKAECPTQTEIVIKGSNKQVVGQVAAEIRAYRQPEPYKGK
GVRYADERVVIKETKKK
>AHV91594.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91595.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MFKQSEPVDRPMAQLEALNRLMALAEYSLDGRLQRANDLYLSILGLPRQEVLGRHRNSFCSRVTGESDFWPGLLAGEACS
VKEEQIGRDARICWLQATYTPVYDASGNIQHILKAATDITEQVRQEQAQYANVQRLTLAADASDTAVIMADNDTRFIYAN
AGFTRMFGWSAEEVIGRHTVELLTPHLGSAYAQARHKQLLKGVSSQLEEIVVGKQGQRYWAKIITNPIFGSQGEITHIVT
MFTDITHAKLHEALQQQVLEAMVHEQALSDVLELVCKEVERIAPEIATIILELDHEAGLRTLAAPSLPAHFCQELQSTSI
GSGCASGLEPPLPQQGSSVAGNAIELLCSNCLGMVLPEGFTGCAATPIRSSENAVVGYFAFYYRHPRNAAAQAFHQSLVD
ACTHLCALALEREHARERIRQLAFYDDLTGIPNRNLLLAKAEQAIAAAARNRTPLAVLFIDLDRFKQINDTLGHVAGDEL
LRAAAERMRAKFRPNDLMGRLSGDDFVVVLSNTGTDRAADVVEHLQGELARPLRLANTDLSVSACVGLALFPADGRDMET
LLQRADLAMHEAKAAGRGGFSFFSTEMNRLAQERLALENDLRHALKKGLLRLDYQPQIALASGTLYGVEALARWTHPTLG
DIPPSRFIPWQKSVA
>AHV91596.1 nucleotide sugar dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MGLVSGACLADMGNEVMCLDTNADKIAQLRLGHIPIYEPGLEELVRRNVAGGRLHFTDDVAQSVAFGSVQFIAVGTPPGE
DGSADLQYVLAAARNVARHMTAPKVVVDKSTVPVGTADKVRATMAQELANRGVDLSFSVASNPEFLKEGAAIADFMSPDR
IIVGADDAHAIDVMRRIYAPFQRTHERLMVMDIRSAELAKYAANAMLATRISFMNEMANLAEKLGADIEQVRRGIGADPR
IGYQFLYPGVGYGGSCFPKDVQALVRTGAEHGESMQVIRAVEAANERQKLRLAEKVRAIYGDDLAGRRFALWGLAFKPNT
DDMREAPSLSIIADLTQRGAQVRAFDPVAMEQARPLLADNPNVTLTADMYEALDGADGLLIATEWKVFRAPDFERVKRLL
TRALIIDGRNLWVPAEMRDQGFEYQGIGRA
>AHV91597.1 NADP oxidoreductase coenzyme F420-dependent family protein [Bordetella holmesii ATCC 51541]
MKILIVGAGRVGTSVAENLVSEENDITVVDVQPGQLGYLQERFDLRVMVGDATQVSVLEAAGAADTDLLIACAKSGPTSR
PVSSTCCATVVPCMPVWGR
>AHV91598.1 glyoxalase-like domain protein [Bordetella holmesii ATCC 51541]
MLSDPGRTEFDHAVIMVRDRLDALAPDYERQGFRFSDKAVHNLGSCNQLIVLDDSYIELLGWPPGAPPARKEIADSLPGL
EALVFRSADAQATYERLREAGFAVNPVQELTRTAHVGGREMQARFHTVRFAEQPIAGLRMYFCRHLTPECVWAPEFMTHA
NGAYSLVRIDVRAADAQMVAWRLALVADAEVQAADEGWDVVLANLRIHVADDDTVAAPTLSTLTLAYRDGSQRELTTAL
>AHV91599.1 surA N-terminal domain protein [Bordetella holmesii ATCC 51541]
MFEFIRTHRRWMQLILLLLIVPSFALVGVQGYTSFVNGEPELATVAGQGVKQSEFDAAHRNQLEQFRQRLGTQFDPAVLD
TPAMREQLLNQLIDQRLLAQVALDNRFSVSDETLRNTIAAIPQVQDDGRFSPERYRQVLAAQGLSPTSFENGLRRDLAVA
RVLEPIGLSARVPQVVVQDVEQALTQKRTIQLRTFAAADFRSKVTVTPQDVQTWYEANKESLRVPEQVQAQYLVLDEAAA
TQGVEVKDEDIASYYEQNKNRFGTPEQRRASHILINSAASDSADARKAARAKAEEIARQAAANPAGFADLAKKDSQDAGS
AAQGGDLGWIAANSVPPSLQQAIAGMSKDAVSGVIESPFGFHILKVTEVKPAQVKTLAEVKDQISGEIRKQLASARFAEM
ATKLQGAVYDQRDSLQPAADALGLKLRTATGITRSGLLPATQAGAGSAAASADSALLENPRVRQALFAADVLREKQNTGV
IELAPDTLLALRVAVVEPSQIPPLDKVKDGIRARLLDERSAQAAREAGEQALKALQTQDQAEGFGAPLTISRQDPGNLPR
TLVDAVMRMDAAKLPGFAGVPSGSDYVLARLDKVEAGQPDAQAAEMLARQLGGAWGEAEDQAVLKMLREAYKVQILPPAA
PIIKGDQPAEG
>AHV91600.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MDKLRAMELFLSISKTESFSETARQFGVSATSVSRMITEFESELNVKLLLRSTRQVVLTEAGQEYASQLDGILWSINEAH
RNITEIRSAPKGILRVHSRMMFGLGVLPPLVAEFRQQYPDIHIELVLSEAKTDLRRNNFDIDFRISPPVEAGLKRRILFK
SERYLVASPAYLARRSMPAQPADIATHACLAYLLPGEQYRWRFKRDDLIDDIPIQPRHVSNNGVALLELARLGEGIALLN
DYTVQSDIARGTLARVFPDYRVTNTTFEEGMYATILDTAMIPAKIRLFLDFVADHVSGPALRFSAYKASAAGSD
>AHV91601.1 hypothetical protein D560_2342 [Bordetella holmesii ATCC 51541]
MATHKPSGKRRPGEVEHLLKWCLPVDSLSLFTPEGVPFVQGPIVEIPGSVHACLLLWFDCSLVTCLTLFWLVNLAPGLPP
VLGIPPRASG
>AHV91602.1 hypothetical protein D560_0193 [Bordetella holmesii ATCC 51541]
MAIIHIHEDGGATLMGTDYRVEPEGVASMIRQGERFFWIEPPVISQEG
>AHV91603.1 NAD+ synthetase [Bordetella holmesii ATCC 51541]
MLRPLFIERQHAELEKLAAELGALAGLHVLVGHVQRREGRLYNAASLLAAGRNLGTYCKRELPNYSVFDEQRYFTPDTRP
LVFEVKGQRFGVNICEDIWFERTAQAAVHAGAQVLLVPNASPYNLGKQAERLMMAQRTVAQTGCALIYANMVGGQDELVF
DGASFALDGEGQVRARLADFVEGVKIVELHPGGVIEPVGADAAVQPDSDEAQVWNALVLGTRDYLGKNRFSGAIIGLSGG
IDSAVVLAVAVDALGADNVHAVMMPSRYTADISLTDARDMAQRVGVRYDEIIIGPVVDAFEDALAPHFAGLPVDATEENI
QARARGTLLMALSNKTGRLVLTTGNKSEMTTGYCTLYGDMAGGFAVIKDVPKTLVYRLAAWRNTQGDIIPERIITRPPRR
SCVRTRKTRTACRRMMSSMALWCATWSRTPRRPISWPKGIRRRLSNRYCG
>AHV91604.1 DNA repair protein RecO [Bordetella holmesii ATCC 51541]
MSKRAQRVHDNRAYMLHATAWRETSLIVQAFSRDHGCVALVAKGAKRPYSVLRPVLSAFQPLLMSWTGAGEVKTLMRAEV
AGMHPLGGASLMSAWYLNELLLRLLPREDAHPLLFDAYETALQQLAGGSRAAGALRRFEWILLRETGYGIDDQEPDFNDL
SIEPDLRRDLRERLETHLVGRPLATRRVLMELQRL
>AHV91605.1 ABC-2 type transporter family protein [Bordetella holmesii ATCC 51541]
MIITPLTFLGGTFYSIKMLPPFWQTVTLFNPVVYLVSGFRWSFFGSADVSLELSIGMTLLFLAVCVLTVRWIFKTGYRLK
T
>AHV91606.1 ATP synthase F0, C subunit [Bordetella holmesii ATCC 51541]
MTNVAFVALACGLIIGLGAIGACIGIALMGGKYLEASARQPELMNALQTKMFLLAGLIDAAFLIGVGIAMLFAFANPFVG
>AHV91607.1 hypothetical protein D560_0604 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSEPS
>AHV91608.1 mechanosensitive ion channel family protein [Bordetella holmesii ATCC 51541]
MRLFVVLSLALALGNAAGAPPATAAADAETTLAEARKTIDALRKDLDQQTNDDVLVQRRSDALQIQAQADAIAEALAPQQ
ASVTARLTELGPIADGARDTPDVAAQRAQLEKNNRNLDAQVKLARLLSVEAAQTAEQISALRRTQFQAKLGERRGSLLAS
SFWSELRGELPRDLSRLSDLLDDLYATVADTPGWVWTSIAVLVAVGVALRYWAGQMLLRLTATRVPPGRLRRSVLAVAVV
ALSTLAPALVAELVVIGLTWHGEIADDVQILLTSLVEMAAFGGFVAGLGYALLSIHRPSWRLPPLPDVAADGLRRLPLTL
GILVVAAWLAERLPVLINASLTGTIALNSLVVTVMTLVLMAALARTERLRRRLGETPPPRPLWLAALTVIAWIVLGLSLL
ALLTGYAALGSFLVRQTIWTLIVMATAYLASVLIDDGFTTLLGGPAKEEPPTLQTRLRGQAGVLLSGVGRLMVILIAVVL
LLAPFGEAPTDLLHRLDQLYKGLQIGEVQIRPGAVAQALLVLAAGLLSVRLLKRWLATRYLLTTELDPGMQVSAATLFGY
AGVVVAVALALSALGIGLERVAWIASALSVGIGFGLQAVVQNFVSGLILLAERPVKVGDWVSLGGIEGDIQRINVRATEI
QMSDRSTVIVPNSEFITKTVRNVTHANPIGLVQIKLPMPLSTDAQQVRQIMLEAFAAHENILESPAPNVYLDGIDNGHLL
FNAKAYVSSPRTAYGVRSALLFEMLRRLDEAGLEMSSPNTMVLRADNSPPLEPPPSSAAAPL
>AHV91609.1 PBP superfamily domain protein [Bordetella holmesii ATCC 51541]
MFKRVFKQVSIGVALSASVFAVHAADITGAGASFPYPIYAKWASDYKAATGNSVNYQSIGSGGGQQQIKAKTVDFGASDD
PLKAEDLEQNGLLQFPAVIGGTVAVVNIDGVTRASSSCPARSWPTSTWARSRSGMMPPSRH
>AHV91610.1 hypothetical protein D560_2306 [Bordetella holmesii ATCC 51541]
MARQGQQASGEIALARLSRFMEGLPEQAAGDAGIARWSVVGEVGKGTGKSGGVISGQPLLRLHIEANPVLICQRCNAPFV
HPVDSEVVLQLVESEDDLDDELADLQDAQEEGLDFAADVPEKVVGSHRFDLLAQIEDELILSIPYVPRHDICPDASGQAV
GKKAASGDASQASEVKRPSPFAVLEQLKRKN
>AHV91611.1 glutamate--cysteine ligase [Bordetella holmesii ATCC 51541]
MLAQTLRGVEKEGLRVDARGALARTPHPSGLGSALTNEQVTTDYSESLLELITGTHTSVEALMGELRDTHRFVYSVLEGE
FIWNQSMPALLPPEAEIPIAWYGKSNTALLKHVYRRGLAERYGKTMQCIAGVHYNFSLPDALWPVIEPSAATLQESRSRG
YIALIRNFTRYSWLLMYLFGAAPALSSAFLSGRDHPLQPLGPDTLYLPHATSLRMSDLGYQNKAQAQLKLCYNDLSTFLG
RLYEAVTQPWPAYQAMGTHRDGEWIQLNTNVLQIENEYYSSIRPKRATGRGERPITALAERGVQYVEVRCLDIDPHEPTG
LSAQTARFVDAFLLFCAVSESPFFSQQGYCQRSADNFATVVKEGRKPDLMLDRDGQAIGLAQWGDELLDQIAQYAALYDQ
ALGGQAYAQALEQQRAKLRDPDLTPSARVLAELRASGLSFQDYTLAQSQAHARTLRESPLPPQQAQAYAQAAQASLEQQR
QIEQSDTVDFDTYVARYHAALKNPLPARDAT
>AHV91612.1 hypothetical protein D560_1758 [Bordetella holmesii ATCC 51541]
MIISLRPTGLPSRPGLWQIGLIELLCLFPQSYPQSGKFLINPLGRCAA
>AHV91613.1 succinate-semialdehyde dehydrogenase [NADP+] GabD [Bordetella holmesii ATCC 51541]
MGTTETRHAIQAANRALPAWRTLPAKTRAIKLRKWFELMLQHQDELAYLMTIEQGKPLAEARAEIEYAAAYVEWFAEEGK
RLYGDVIPAPQADKKMLVLKQPIGVAAAITPWNFPSAMITRKVAPALAAGCTIVLKPAPQTPFSALALAALAEQAGIPAG
VFNIVTGHAIEIGAELTSNPIVRKLSFTGSTQVGRRLMAQCAHDIKKLSLELGGNAPFIVFEDADLDAAVAGAMISKYRN
NGQTCICANRLYVHDSVYGDFAQRLTQAVEALRVGNGLDRGVTLGPLIDQAAVTKIQSHIDDAVDKGAKVLLGGKPHALG
GTFFEPTILTDVPADAAVATAETFGPLAPLFRFHDEAEVLARANDTEYGLAAYFYTQDVKRMFRLAESLEYGMVGINSAA
ISSEVAPFGGVKASGLGREGSKYGIEEYIEIKYVNLGL
>AHV91614.1 hypothetical protein D560_3919 [Bordetella holmesii ATCC 51541]
MHIVIPGALPDLAVASELARHLPEHAPTFSRWLALGQAEAAHFDPRIHGCTAYEGWQLQAAGFQAEPGQSLGMGLGPLLA
GIRDGSDSVWLGELVHLALGADTASLLDPEMMDLRTEESAVLFDAIAPLLADGEFGAEILSPQRWRLRLPAGMAPRPASP
LAVAGDRLQHWWAQDAASRPWRRLLNEIQMAWYEHPVNEARMARGAPPVNALWLYGGAHPWQPVPHQAQVYTGLEALARE
GDWGGWLRCLAALDAEHFKPLANAHGQVLTALDLTLLGRDRRASITLKPRAGLLKWWPARQHNWNRWWSHPV
>AHV91615.1 putative acetyltransferase domain protein [Bordetella holmesii ATCC 51541]
MTLDTVSDSPAQALYLSLGFEEAGRIPGYAIDPHGARAESTTLMFRRT
>AHV91616.1 arginase [Bordetella holmesii ATCC 51541]
MIGAPTDVGASARGASMGPEALRVAGLTERLQRRGHRVHDSGNLAGPPNPWQPPVEGLRHVDEVIAWNRLVHDAVYDALQ
CGHVPVMLGGDHCLAIGSISAVARHCRTAGQGLRVLWLDAHTDFNTQVLTPTGNLHGMPVACLCGAGPRPLTQLSGASPA
LQPAWIRQVGIRSVDEGERCLVRQAGLQVYDMRHIDEAGMRATMQAALAGLDDDMHLHVSFDVDFLDPDVAPGVGTTVPG
GATYREAQLCMEMIADTGRMASLDIVELNPALDVRNKTAIVAAELVESLFGKSTLIRPQG
>AHV91617.1 N-acetyl-gamma-glutamyl-phosphate reductase [Bordetella holmesii ATCC 51541]
MAQATNSRIKVGIVGGTGYTGVELLRLLSQHPNVELTAITSRKEDGLPVADMYPNLHGRVKLAFSAPEKATLTDCDVVFF
ATPHGVAMAQAQELTAAGTRVIDLAADFRLQDTAVFERWYKMPHTCPDILANDSAYGLVELNREAIASAKVIGNPGCYPT
TVILGLAPLLEGGKKLIDTQNLIADCKSGVSGAGRKAEVGSLFSEASDNFKAYGVAGHRHHPEITEQLEKLAAGKVGLTF
VPHLVPMIRGMFSTIYARILPEARDTDFQALFESRYAGEAFIDVMPAGSLPETRSVRASNNLRISVQRPGNGDQLVILVI
QDNLVKGAAGQAVQNMNLMFGLPEATGLDQVAILP
>AHV91618.1 carboxymuconolactone decarboxylase family protein [Bordetella holmesii ATCC 51541]
MLTALGKGAELKMHVVGALNNGCTVEEIKEVLLQAMVYCGVPAGVEAFRATEEVLAAENLIEKKA
>AHV91619.1 cytochrome c family protein [Bordetella holmesii ATCC 51541]
MKRFTFALAGIVLATAGVSAQAQDVVAGKAVFDKFNCASCHGADAKTSVQPEYPVLAGQHADYLAHALKAYKRGAAGSAA
TANVRKNPIMGAFAAQLSDQDIRNVAAWLAAQPSDLGVRQ
>AHV91620.1 methylpurine-DNA glycosylase family protein [Bordetella holmesii ATCC 51541]
MAGGVDDLAPLPDSFFDRDAATLARDLLGKILRRRWGSLWLSARIIETEAYYLTDKGSHASLGYTHKRRALFMGGGTIYM
YYARGSDSLNFSARGQGNAVLIKSAFPWLDAVSGPNRCGLCRRSIPIARAGCARPRSFAPGRRCCVVRWG
>AHV91621.1 rieske domain protein [Bordetella holmesii ATCC 51541]
MRVCDAQSLVNGGPGVKLPVTDGSGQTTVFFVRYQDKVYGYLNRCTHVGVEMDWENSFFTRAGDLLMCARHGATFQPDTG
VCAGGAGRNSRLTALEVQEREGAVYWLPSGKIQPL
>AHV91622.1 FAD linked oxidase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MQFMEEEHGEDALALMRSLKHAFDPNNILNPGKIFAW
>AHV91623.1 3-oxoadipate enol-lactonase [Bordetella holmesii ATCC 51541]
MWARQVPAFAKHFRVVRYDTRGHGRSSVPQGEYRFDQLAGDVVELLDHLGIERAHFCGLSMGGPTGLTLALDHASRIDRL
VLCNTAARIGSAQGWSDRIGAVQKQTLAAMAPALVERWLTETYRQREPGLSQVLIDMLRRTPDAGYNGNCAALRDADLRE
RLGQIRARTLVVASTHDLAATPADGRYLSEQIPDARYVELNTSHISNWEDPETFTREVLAFLTE
>AHV91624.1 PAP2 superfamily protein [Bordetella holmesii ATCC 51541]
MRPLSGKTALLALLALLAAGAIWVDRPLAIWLNGNVPEDVNIAFDTIGNLGDAGIYVVLALGLYIWSLNGMARGWHCYFK
AGFENIARASVLLLATMAVGGGVTWLLKRVVARARPEELFDHGIYGLGGLFAGKPFDSFPSSHTQAAFAVAGVIAIVSPR
WRWLALTLATMVGVSRVINRDHFFTDVVAGAAVALSCAVLLAPVILSKDRQWPLRAPWRWRKA
>AHV91625.1 response regulator [Bordetella holmesii ATCC 51541]
MTFSAISGTASTLSEARPMRIASLEDDLDQARQIQQLLEQAGYECTSFQQSQDLLAALRNETFDLILVDWQVPDMNGDEV
V
>AHV91626.1 tripartite tricarboxylate transporter TctA family protein [Bordetella holmesii ATCC 51541]
MAIGIPENAVMALMLAAFIVKGIQPGPNMIATHPDLFWGLVASMWVGNCFLLLLNVPLVRYWLSVFKIPYTVLFPSILFF
CCIGTYSINNSLDDIFITAFFGAIGYIFMRLGMEPAPLMLEFILGPMLEENFRRAMLLSRGDFGIFVTRPISGTLLGVIA
LIILFQFRGFLRKRKQTEPLPSHADQA
>AHV91627.1 CAAX protease self-immunity family protein [Bordetella holmesii ATCC 51541]
MPRLTLRQEVGDWWRFIRRPTLAARLGPRHGGAMADWCLNIRASRLLAWASLLWLFNLVVLGPIAVGAATLGGAQHRMDP
DNIPWLAAVIWAPLVEELLFRYGLRRPLQALWVIPVVLPALIWGPKFWTGCLVAAVILLAISGTRHMGRFKRGPRRFYQR
HFGLVFHLAALTFAAVHLGNFSFGSTAWWLLPLLVLPQWLTGLVLGWMRVRRGIAASMALHAVFNAGPMVMIWLLLKLVP
DMAL
>AHV91628.1 hypothetical protein D560_3392 [Bordetella holmesii ATCC 51541]
MSWDIAAQTGAGVAQDINRTACSDLDALLALAGSLVPGLDGRIGPVSGDIRPGADNRATLRTLQDWWRLRHPEAGSHYLA
LRCWGLLIWQPIYLGVIAVHCSDIAPDLDRLGQPVRDGFIAGYILERHEPLRGCLEQRKQAVAAQLRRICATYFRELSQL
LRLSPRAAACMQADCVLSALLAARANEDKATVAWAHEQAADWLDRLGIAGHSGYLVYARAGRPVLALDRQVCCHHFRRHD
GDYCSTCPKLPPAERIARIEADEAAA
>AHV91629.1 nicotinate phosphoribosyltransferase [Bordetella holmesii ATCC 51541]
MIITSLLDTDLYKFSMMQVVLHHFPAAEVEYRYKCRNPGVNLRPYLDEIRQEVHALCQLRFTDDELDYLRGLRFIKSDFV
DFLGLFHLPERCISIGEGKDPGEISITVKGPWLHTILFEIPVLAIVNEVYFRNMQPSADWEEGRKRLQSKMHLVVDDPAL
ADFRVAEYGTRRRFSKRWHEEVVTTMKAQMGANFAGTSNVLFAMQNNVLPLGTMGHEYLQACQALGPRLRDSQVFALEVW
AKEYRGDLGIALSDVYGMDAFLRDFDMYFCKLFDGARHDSGDPFVWGERLLEHYRKNRVDPRTKTLVFSDSLTFPRAIEL
ARQFSGRCKVSFGIGTNLTNDLGHQPLQIVMKMVRCNGQPVAKVSDAPEKTMSDDPAYLAYLRQVFQLPPA
>AHV91630.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MSATISIPSLIDKNRMSAFQWRVLILCFLIALFDGFDTQAMAFTGPAILVAFKLQAGELAPILTAGIVGMTVGAMLLGLV
GDRIGRRPAALLGVAVFGLATLVTAGATETWQILVLRFIAGLGMGGCTPIVLALAAEYAPARLRGTVITGVLLGLPAGAM
LGGLLAARMLPVIGWQGIFIVGGVAPLVLLIALFALLPESLQFKAMRGDTASQGYVARILAKISGQLLPAGTRLTVPEDA
TIRASVKALFKDGYARKTLSIWSIYLLNWVAWFMLLSWLPTVLKAAGLPAEQAPMGTFTINLVFIACAIPLSYLMPRVPT
RSLLIAMFALGIVVSLGLGYAGTDWTLVFILIGAAGLGVGGQQLALNYLVIGAYPTALRATATGWSIDIGRAGAIIGSAI
GGTVLGWAGPSGFFMVLAIPLAGALLAVLAVDKQSSQPASGELSRAH
>AHV91631.1 thiamine biosynthesis protein ThiC [Bordetella holmesii ATCC 51541]
MNANPKFLAATAEVDAAAVAPLPKSRKIYEIGSRPDIRVPFREIEQHDTPTMFGGEHNPPLTVYDTSGPYTDPQVTIDIR
RGLQELRRGWIDERGDVEVLDGPSSEYGRGRLEDPKLTAMRFDLRRPPRRAKTGANVTQMHYARRGIVTPEMEYVAIRES
LRREHYLESLRASGPEGEKMARRLMRQHPGQSFGAAIPKAITAEFVRDEIARGRAIIPANINHPEVEPMIIGRNFLVKIN
ANIGNSAVSSGIGEEVEKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGAVPIYQALEKVDGKAEDLTWEIFRD
TLIEQAEQGVDYFTIHAGVRLPFIPMTADRMTGIVSRGGSIIAKWCLAHNKESFLYERFEEICEIMKAYDVSFSLGDGLR
PGSGYDANDEAQFAELKTLGELTQVAWKHDVQVMIEGPGHVPMQMIKENMELQLEHCHEAPFYTLGPLTTDIAPGYDHIT
SGIGAAIIGWYGTAMLCYVTPKEHLGLPNKKDVKDGIITYKIAAHAADLAKGHPGAAVRDNALSKARFEFRWDDQFNLGL
DPDTAREFHDETLPKDSMKVAHFCSMCGPHFCSMKITQDVREYAASQGLSEQQALSQGMQEKAIEFVKKGAEVYHRN
>AHV91632.1 glutamine amidotransferase class-I family protein [Bordetella holmesii ATCC 51541]
MPLPLPILILHTGDPDAGLASHHGSYAEMIRRAAGLARSEVHVVAVHEGQSPEAPSRYRAALITGSPAMVTDHEDWSEAC
ALWLRSAAEAGLPMFGICYGHQLLAHALGGRVDYNPAGRELGTHEITLSAAAQDDPVTAGLPQRLPAQMMHAQSVITPPG
GSIVLASSPMDAHQMLRLRPGVYSTQFHPEFQADFVRDHILHHGDAYAREGLDTAALSAGVSATPQACGLLARFVAHYAA
SQRTA
>AHV91633.1 transcription termination/antitermination factor NusG [Bordetella holmesii ATCC 51541]
MSKRWYVVHVYSGMEKSVQKALNERIERAELQMSFGRILVPSEEVVEVKGGQKSISERRIFPGYVLVEMDLTDETWHLVK
NTNRVTGFLGGSGNRPTPISEREVEKILSQMEEGVEKPRPKILFEVGEMVRVKEGPFADFNGNVEEVNYEKSKVRVSVTI
FGRATPVELDFSQVEKT
>AHV91634.1 hypothetical protein D560_0233 [Bordetella holmesii ATCC 51541]
MTPPTRPRVGTSGAPGHDNLEEDAVERDLDEALMESFPASDPVAITPEEDRPDPVDEALKESFPASDPPAPTQPRKK
>AHV91635.1 sulfite exporter TauE/SafE family protein [Bordetella holmesii ATCC 51541]
MYAKAAWRIVTLNTGAGMTFYVILAVFGVLAGVTTLLFGFGGGFVVVPLLYQGLLATHAPGTPEAASAMHIAIATSTCVM
MVSAGLATRRRIHLLQWSWIWPLAGYIALGALLGASLAVLASGSLLRWAFLIYLGITIADCLLRKGFLEGAPARSLGPAA
TAGTGIGIGAIASFLGVGGSVMTVPLMRRRGLDMASSSAMANPLSLPVVVVGTLAYVLLAWRHAGSIGPWHAGYVDLRAF
AVLTLSAYAGIRLSAPLAGRIPDRLHARIYIGLLVLVFVVMALR
>AHV91636.1 malate/L-lactate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MAHVYLDELHLLAAASLVAAGATPAMAQATASALVYADSQGLSSHGVSRVAAYAGHLRAGRAVGSAEPRLVHEKGAAALI
DAGSGLAYPACAMAITEGIRRAGEHGVAFIGVGNSHHFGAAAYHLEAVADAGMVGLALSKSPAAMPAWGGKRPLFGTNPI
AAVFPRRRGAALLMDLSLAQAARGKLMIAARDGKPIPQGWALDADGQPTTDPQAGLAGSMLPAGGVKGAMLAMMVELLVV
ALTGSQFGFETESFFGDAGSRARLGQAFLLIDPQALAGRESYLERVETLIAAMLADEGVRLPGQRRRALRNEALHHGVEI
PDALLAELRGMCAAG
>AHV91637.1 marR family protein [Bordetella holmesii ATCC 51541]
MNSVNTTDPSQQYDLRILRALRRITRSIALHSRQLAAVSHITAPQLMCLRTVIANGPLTATAISREIHVSPSTVVGILDR
LEDKGSIRRERGREDRRIVFVTATDAGRELASQAPSPLQKHLADALNALPELEQATITLSLERIVALMEEEGHVAEAHGD
PASPILEVPTGGAPPESGLVV
>AHV91638.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MQWSLIFSAYAGSIMLLAIVGTPGLGRMAVSEFGGKYNAVAFADLTLFFGFASALCLPWSQSTWPRLEAAVKILAVPLSV
YAVWVSETRSSWILFGVLGLVIFLVHRGIAWSRA
>AHV91639.1 aspartate-alanine antiporter [Bordetella holmesii ATCC 51541]
MTCSVGFFQSVPIAIIFIAVGLGHFIGKLRLGPVALGGVCGTLIVAMILGQTGCKVEGPVREIAFVLFIFAMGYSGGPGF
FANLNRSSLRFMVLPFIEVVLVLLISLLAASFFGFDAGTTAGLAAGSATESAVVGTASEALRHLGLTAEQVQVQEANIAT
AYTLTYLVGTISIVLFTSQVAPLLLRINLWQACKDLEAKLGGVPDEEDSSMPALPRLVGRAHIVREAAGKTVLEIEQALA
GRTVVTSLLRDGESLTPTPEEVLQAGDIVVIVGLRFYALRGDDVIGPEIQVPAAHADALNLQERQVVISSKHVNGRTLSH
LAKTPKARAARGVFLQGIERSGHSIPMTPSTVVMYGDVVRLVGTDPNLSDAVKHLGNELRRDGTTDIVFMCGGILLGLGI
GSLMVTVAGLPLSLGSGGGALVSGLICGWISAKRPALGHIPPAALSLLKELGLGIFIACVGLSAGPEAITLLKQHGLVLP
VIGLAVSLGPACASLWIGHKFLKIEGPLLLGAIAGQHVSTPTLSAVMVQAGSSVPILGYTVTYAIANVLLPVLGPLIVAL
AYRLG
>AHV91640.1 hypothetical protein D560_0460 [Bordetella holmesii ATCC 51541]
MRRLTLRFVIAALLLLTASRLGLACWQWGEWRRQVASGPLCSVAGASTW
>AHV91641.1 hypothetical protein D560_1245 [Bordetella holmesii ATCC 51541]
MWRRISTATSRGVDIVRAGAGEFYVLEDNLRVPSGVSYMLENRKMSMRLMPEAFGSNKVRPVAHYPDLLLDNLREVAPGG
NVDPTVVVLTPGMYNSAYFEHAFLAQQMGVELVEGQDLFVEQNTVYMRTTRGPRRVDVTYRRLDDDFLDPLSFRADSALG
VPGLLSAYRAGRVTLANAIGTGIADDKSTYLYVPEMIRFYLGEEPILSNVPTWQCARPDECSHVLANLHELVVKEVHGAG
GYGMLVGPCAIRQEIDDFKLRVQAHPANYIAQPTLSLSTIPTYVESGVAPRHVDLRPYVLCGKDIRTVPGGLCRVALTEG
SLVVNSSQGGGTKDTWVLED
>AHV91642.1 methionine aminopeptidase, type I [Bordetella holmesii ATCC 51541]
MIKRPDEIALMAESGRLLAAVFGRLDSLPLAGMSTMQVNDLVEQFIVQELKARPASKGQYGYAYALNASPNQVVCHGVPS
TADVLRNGDIVNFDITLEKNGHIADSSKTYLVGEVKPSARRLVQVTYEAMWRGILAVRPGARLGDIGHAIEQYARQHGYS
VVREYCGHGIGREMHEAPEVLHWGRPRTGLVLREGMVFTIEPMINQGRADVRTEDDGWTVVTEDGKLSAQFEHTVAVTAH
GVRVLTLRADEKRK
>AHV91643.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MGLGIWSMHFVGMLAFSLPISLGYDLALTGLSLVIAICSSAFALWVVTRSSLPRLRLVGAALLMGCGIAAMHYVGMEAMR
MYPAIEYSPGLFFLSVVVAIVASGAALWITHNLRLTRPGAPAYRVFAAVVMGLAIVGMHYTGMAAARFSENSICMAVLHG
ISAGWLAASVTAVTLSVLGIALVVAVLDTRLEARTSALASSLALANEELLHLALHDALTQLPNRALLDERLIQAIARAKA
ARGHLAVLFIDLDGFKAVNDAYGHQSGDSLLRQLARRIENEALRPGDLVARLGGDEFIVVADMIAPTDAANLAEKLIETL
SREAEVDGNTLSVTASVGISIYPDDGEDGRTLLTHADAAMYHAKRLGRDPRYSYFEPAMNENAREQLQLLQDLRQAQARG
ELVLYYQPKFVAPSGPVVGAEALLRWNHPKRGLISPGEFIPIAERTGLIFSIGEWVLDEACRQMRIWRDLGHSNWTVAVN
LSAMQFSQAGLVETIRDTLARHLLPASCLAIEITETTAMHDAEASLAVLRELADLGISISIDDFGTGYSSLLYLKRLPAS
ELKIDRGFISQLEHDQEDAAIVSAIIALGQRLNLRIVAEGVETQAQQQFLTELGCDSLQGFLLGKPLPPQDFLKADFARS
QD
>AHV91644.1 peptidase M23 family protein [Bordetella holmesii ATCC 51541]
MNRGFNSLVRSLSRKVAALFTPAVETRSSRGGSLMRRTLVVCALGLFAGAAALGMVQQPDRTELPPLRLINSELPLLPEQ
LQVSASAPAPYISETRIRSGDTLASVLQRLDLDDSKLQTFLTHEASARSIYRLYPGRAVQAATDEEGKLVWLRYIHTPGN
EVDGQVYTKLLNVQPAGDSFKTEEITESTDLQTRVAVGTIRSSLFAATDAAGIPDSITMQMADILGAKIDFLRDLRQGDQ
FRVVYEVRSHDGRYAGAGRLLAVEFVNNEKVYSAVWFSADNKSGSYYDFDGTSLRGAFLRTALKFSRISSTFGMRMHPIH
RTWTGHKGVDYAAPSGTPIHSTADGTVEFAGWQNGYGNVVIVKHYGKYSTLYAHQSSIRAGLKKGDKIAQGDLLGYVGAT
GWATGPHLHYEFRIDNQPVDPLSVDLPVARKLEPAEARAFATTVAPFKQQIQLLTEFQHTLPESMTNVASR
>AHV91645.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91646.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [Bordetella holmesii ATCC 51541]
MRHGESQWNLENRFTGWTDVDLTETGREQARKAGELLKREGYVFDLAYTSVLKRAIRTLWIALDAMDAMYTPVGVSWRLN
ERHYGQLQGLNKAETAAKFGDEQVLIWRRAYAIAPEPLDLDDPRHPRFDSRYAKIAAEQLPATECLQDTVARVLPFWNES
IAPAIRSGRRVLIAAHGNSLRALIKHLDNVSDDDIVGINIPTGQPLVYELDENLRPIRHYYLGDAAEIEAAMAAVAAQGK
AKKD
>AHV91647.1 moaE family protein [Bordetella holmesii ATCC 51541]
MILVQEADFDTAALTAGLRAKAGSQAGALVTFTGYVRDYAPGQATETLYLEHYPGMCERELEAIARRARERWQLAGTVIA
HRIGALPREDQIVFVAAASAHRGDAFQACEFMIDALKTRAPFWKRETLADGNRFWVQQRVEDDTRTHAWEENKDKP
>AHV91648.1 fecCD transport family protein [Bordetella holmesii ATCC 51541]
MVDPLRGKPTRMGLLAAMALLCCIAYMTLDARGQWSFVIPFRGGKLLVMVLVAYCVALSSVLFQTITHNRILTPSIMGFD
ALYVAIQAAVVYGFGLNALSGQPPVWQFVLEAGAMAGFACLLFRWLFTGATQSLHRMMLVGIVFGLLFRSLSSFAMRLID
PNEFLVLQDRMFASFNSVRTGLLPLAAAVALLVSLGLWRMRRRYDVVALGREIAINLGVSYRNTLLATLAGVAVLVAVAT
ALVGPVTFLGLLVSNLAYQSMASDRHALTVPAAVLWGVIFLVGGQTLLERVLGLSTTVSVVIEFIGGLLFLILILRKARP
>AHV91649.1 gram-negative pili assembly chaperone, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MEDSGGILQISVRTRLKMFFRPKGLKGSADNAASDLTFRIAPGGKLLISNPTPYYINLREASYGPQEHPTQRYPSMMIAP
FASATLDLGAARPASIRYASISDLGAIFFFEKEVGKQ
>AHV91650.1 cation transport family protein [Bordetella holmesii ATCC 51541]
MKRLLATFYVLGLTMVVFALTMLIPLGVAWLGEDAGLRAFVEGFGLAMGIGTGVCLAAHRWRSELHARDGFLLVSIVWVG
LPLLAAIPLLLYYSQIGQPLSFTHAYFEAMSGLTTTGATVLTDLNHLPPSINLWRATLIWIGGMGILVLAVAILPLLGVG
GHQVVRAETPGPMKDERLTPRIASTAKALYAVYFGFSILCFLAYRAVGLSWFDAWAHMATTMGLGGFSTYDEGFLKFDSI
PVELVAIVFMLISGINFATHFNALRQRGFRPYLTCPQTIPYLAVVLGAGLVISVYLFFKHVYTDPLQALRYGMFNTISVA
TTTGYANADYGAWPLFAPLTMLLLSAFATSAGSTGGGIKMIRVILLIKQARNELVTMLHPHAVSPVRIGSRIVDQRVMFS
VLAFMLVYGQSVGVLSSLLLLSGLDLTTAFSAIMAMINNTGPGLGVLGPMGHYAVLSDFQIWICTFAMLIGRLELLTVLV
LFTPWFWRK
>AHV91651.1 ribosomal protein L11 [Bordetella holmesii ATCC 51541]
MAKKIVGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAKTQGMEPGLPIPVVITAFADKSFTFIMKTPPATVLI
KKVAGVQKGSPKPHTDKVGTLTRAQAEEIAKTKQLDLTAADLDAAVRTIAGSARSMGITVEGI
>AHV91652.1 queuosine biosynthesis family protein [Bordetella holmesii ATCC 51541]
MSTFTVSDFDYNLPAELIAQTPAAERGGSRLLHLDGQGRLHDRQFCDLLSLLRPTICSFSTIPASSRPA
>AHV91653.1 glutathione S-transferase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MLKIWGRLSSVNVQKVVWAVRELALPHTLTEAGGAFGGLDTPEYGRMNPNRRVPVIDDGGFVLWESNAIVRYLAARYGAG
SLWPADPCVRADADRWMDWQTTEWQPAQGPAFLGLIRTPDDKRDAAAIEASIKRSTACALLLDQALQGRDFIAGPQFTMG
DITLGCATHRWFGLPIERPDTPHLAAWYRRLMMRPAVQGVLTLPLS
>AHV91654.1 mandelate racemase [Bordetella holmesii ATCC 51541]
MDGEAMGVRRAAQACEQGFRAIKTKIGYPSLQEDLRVLRALRHAVGDEVAIMADYNQGLTVPEAARRLRALRDEGLCWIE
EPTLQEDYLGHARLRGAVPVQMGENWFGVEEMQKALTAGACDYAMPDIMKIGGVTAWLRAAALAHAHGVPMSSHIFQEFS
AHVLAVTPGAHYLERMDLAAPVLQQPLRFEEGQAIIGQAPGVGLQWDERAVSRYGV
>AHV91655.1 glycosyl hydrolases 31 family protein [Bordetella holmesii ATCC 51541]
MPPKYDFAHTNQLDSIELLTSRPSRIDFDAGGGLHMVVEAHAPGVFRLRCGAAGLLTDERPSARARAVAEMLLARQEAVG
EATIAPRDDAQGWRITQGDVALELRTDPLQLTLYRGEADVLTSSLSPHNPPFGHNALDEPDEAVWTAAFALREGEPVYGL
GETPGDLNRREESVVSDDPEHRALPLAWSPRGWGIYVNTASRVEHTVGVAPDDSSYVLTLDDPVLDVFLFAGDPAEILNQ
YSALTGRAGQPVLWAMGAWLQQVAGQMPTETAALVEEFREQQIALDAVTLALPAAWTFQADKSAIEWDAQRFPDARQTLA
LFHKLHVHVAGHGFPAVLRHTPLFEELEDRGWLLTRDDGSAQVFDGNEATAGQPYGLLDLTYRDAYALWVERHRQLVDDG
LDSPACNAQIAIPDGVSARNGETGPALRTIYPLLARRALFDAVAGHKVPPEGVVPSTDLFPAAQRLPWQSGPQVSNDWAG
LQHTLRTALSIGASGLPVQVHNLGSATASLDGMTPELYVRWLAANVFSANFSFQGLPGLLPWAFGPQTLAHVQTWMQWRY
RLIPYVLGAIEDAARTGLPVQRSMAMSFPNDPDAHAWDLQYLLGPALLVAPILEPGRQARVYLPKGEAWWDLNTGHRYEG
GTTWTLDCDLDQFPVFGREGHMLCLGPQAQHTGEFNSARILDEVWMFGMPVHNPVVMRNKIRVMQMQGSSYIKGLEGLRI
LPSEGLEVKRRGAEVRISRAR
>AHV91656.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQS
ALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHHGIGRAVPISRLNLDEYNLLTVHS
>AHV91657.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MNTGGMILGGMALSNALVGLAGALFAQTQGGADISMGIGTIVIGLATVIVGESILPSRRLVLATLAVIIGAIVYRFFIAL
ALNSDFIGLKAQDLNLVTALLVTIALVIPMLKRRLLGKKGR
>AHV91658.1 pilin accessory family protein [Bordetella holmesii ATCC 51541]
MADLCLRQVGAHGQWVHGLSWFAVVGSHARALARLRARQMRASHYLLGGDRAMTAGCARVPGRGPRYSAAQQVASRYGSE
TFAAIVTLDQGHWLVAVQDGAVLVGGDQMFSDKTQALAALEAFDLPEIASPDAISLALQIAPLPAARLRALPPRPSRWLG
GLLVALGCAVAWSAFMGEPVKPARQVASVSAERPFRPALCLGPVLGSLYRLPMRTAGWRLSGAQCSPQQQWQCQARYQPE
SAQALSVDFQNRVSDQWQVDFPGLDEAVLHWTAGSVCRADPQPLERRWMQALQPWRGAFSEMRIGPWADTPDGRLRLLRL
AGPLRSYSLPVWEILPAHWQGLRLQVDLSQRVDARRSPLTLHLEGEIHADTSLP
>AHV91659.1 uracil phosphoribosyltransferase [Bordetella holmesii ATCC 51541]
MPVHEIRHPLVRHKLGIMRRVDLSTKSFRELSQEVAALLTYEASKDMALAPATVEGWCGTVEVEKIAGKKVTVVPILRAG
IGMLDGVLSLIPGAKVSVVGLARNEETLQAHTYLERLVGELDQRLALIVDPMLATGGSMVATIDMLKRAGAREIRALTLV
AAPEGIKAVMDKHPDVHIYTASIDNGLNELGYIMPGLGDAGDRIFGTKQKVE
>AHV91660.1 cytochrome c domain protein [Bordetella holmesii ATCC 51541]
MTKISTSLTALTLLLACSPVAWAQDKVMDLGKQAYQECIACHSVKPGENGVGPSLAGVYGTKAGEVPGFRFSGPMKRSGL
TGNAETLDKYLENPQALIPGTRMPYSGMADAEKRAALVKYIETLK
>AHV91661.1 oligopeptide transporter, OPT family [Bordetella holmesii ATCC 51541]
MAEGLRVPDSMSLPELTVRGVLLGMVITVIFTASNVFLGLKVGLTFSSAIPAAVISMSVLRMFSGANILENNMVQTQASA
AGTLSSIIFILPSLVMLGHWQHFPFWQTLAICAAGGMLGVMFSIPLRHLMVVKSSLPYPEGVAAAEILRVGSSARSQEAS
GRTAPTGMGDILLGGGVAAVASFAASGLRLLGDAVNGWWSLGGAVLRLPMGFSLALLGAGYLIGIVAGLAMLTGLVIAWG
WRCPC
>AHV91662.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MFAILLAQKTGYVLMTLQRISGSLLRGGLALFTMVAVLAGCSRESPINSPYLSGALADNTLYTAFVKRSPKYLDPASSYS
TDETPYTYNIYEPLYGYHYLKRPYELIPRAASEISHPVYLDAQGQPLPDDTPGDRVAESVYDIKLRPGIRYQPHPSFARK
EDGSYAYYPLAAGELDDKFYIPDFAQTGSRELTAHDYVYAFRRLASPRVVSPIYSLMAEYVVGMQQYGDHLRERDRAQRQ
GLAAGKHDLPWLDLRPADGFDGVQALDDHTLRIRVKGKYPQFKYWLAMTFTAPVPWEADRFYSQPGMAEHDLSLNTWPVG
TGPYMLVESRPNWRHVLARNPNFHGEAYPCDGEPGDKEAGLLADCGKPTPFIDKVVFSVEKEALPLSGKFLQGYYDVPQV
ERGEYGVSMLVAAGDSQDKAALYRERGIRLPTTVETSNWYMGFNWLDPVVGKGDTPQQAERNRKLRQAISIAFDWEEYIN
IFENGQAAVAYGPVPPGVLGYQPLPQGYNPKVYDLVDGKPVRKSLDVARRLLAEAGYPDGRNAETGAPLVLYYDAMSGAG
SNPQFDWMRRQLGKIGIQMDIRSTDYNRFQDKMRRGSAQLFLWGWNADYPDAENFLFLLYGPNAKAKNGGENAANYENPE
FDRLFEQMKFLDDGPEKEAIIARMVEVVRRDAVWMFGFFPMSGGAYQQWVGNAKPTQMVRNTLQYMKVDPALRVQKTDQW
NSPHWWPLGVLVLLLALAIIPSYITLKRRERQTAFGTRERQS
>AHV91663.1 phosphoribosyl transferase domain protein [Bordetella holmesii ATCC 51541]
MSSPQNDDSHVWVTWDDYHRLIEKLALQVFQSGWQFDQILCLARGGVRVGDVMSRIYDVPLGILATSSYREAAGTKQGDL
DIAQFITITRGTLAGRVLLVDDMVDTGMTFNKVFNHLKEQFPAITELKSAVLWWKGHSQVTPDYFVDKLPTNPWIHQPFE
DYDSLRPHQLESWVRKGNR
>AHV91664.1 transglycosylase SLT domain protein [Bordetella holmesii ATCC 51541]
MPDASMAGVFRQLAQGVHHNLAEGLRLCSVYLGIAVIVTVSMGFALPGLRDQALQVHKALLTALAPTSLSAGPEAGPESE
GSAAVVMAVPNAPASNATGFLGPLRSEPLPPQRKSVAGTSNGQVEALRNYISRKYKVAYDATGVLVNTVYRVGRDKQVDP
LLLLAVIAIESRYNPFAESAVGAQGLMQVMTRIHQDKFDAIAPGRAGALDPVANIHVGATILKDCIERRGSVNGGLACYV
GATGPDDGGYGAKVQAERRRLALASGIALARD
>AHV91665.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MNNSPVPQLLNRLRMRQVALLLAIDEKLTLRAAALALGLSQPAATKMLHELEDTLGQPLFERIGRGLRATPAGTRATAYF
RGVQGTMESLSRELYEIKRGGSGRLRLGSIMAASPAHLTDTLVRTKERFPMLEITIDIGTSDRLMEMLDEGRLDLAIGRV
PTNAGRHYVFRAIAEEELSLIVSTRHPLAGRRKVEFAELQAYPWVLQPLGSPMRDVIEQEFRAYHMPLPPGLVETASVLT
TTDLIAKSQMIAVISSVVAARHEEHGLLHVLPCPLRHKLASYGSVVRADRPTSGAVAHFLELLHS
>AHV91666.1 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein [Bordetella holmesii ATCC 51541]
MSNPRVKLQTNQGDMVITLDAEKAPKTVANFLTYVKDGFYNGTVFHRVIDGFMIQGGGFEPGLKQKPTQAPIENEANNGL
KNDKYTVAMARTSDPHSATAQFFINVANNDFLNFTAPTPQGWGYAVFGKITEGTDVIDKIRGVKTGNNGFHQNVPKEDVI
IEKAEVLE
>AHV91667.1 maf-like family protein [Bordetella holmesii ATCC 51541]
MLDGQVLGKPADRADALRMLACLSGTTHEVHTAVVLAHGQTLHQAVSITEVSMRPLSRAECERYCDSGEPFGKAGSYGIQ
GLAGSFIRHISGSYSGVMGLPLFETSELLGHAGIALP
>AHV91668.1 BON domain protein [Bordetella holmesii ATCC 51541]
MKTQQLFAAIALGTTAAFATVAHAADDHKPKQSVGEYASDTAITGKVKAALVGDKDLSALDVAVETNSGVVTLSGTVGTA
AQADKAAVVTRGVEDVKQVQNNVKVDPAKAK
>AHV91669.1 chorismate synthase [Bordetella holmesii ATCC 51541]
MSGNTLGSLFRVTNFGESHGPAIGCVVDGCPPGLPLDAADIQSELDRRRPGTSRHVTQRQEADQVEILSGVYEGVTTGTP
IGLLIRNTDARSKDYSNIADTFRPGHADYAYWKKFGQRDPRGGGRSSARLTAPTVAAGAIAKKWLAREFGTQVRGYMSQL
GPIEIPFASWDDVRENPFYAPNAAVVADLEAYMDQLRRDGDSIGARIEVVAENLPAGWGEPIYDRLDADIAHAMMGLNAV
KGVAIGAGFASVTQRGSEHGDEITPDGFVSNHAGGVLGGISTGQPVTVSLAIKPTSSIRVERRSVNRAGEPVVVQTLGRH
DPCVGIRATPIAEALLALVLIDHALRHRGQCG
>AHV91670.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MRACDRFVKPELAGWLSQYAEALDSDAALGAQLLPRLAAEGIFGLGVPADKGGRAHSDIGHAIEAIAELASYSLTAAFVA
WAQRVVIETLLRGTNDQLAAMSLPELFSGRLAGASGLSNAIKSLSGFDSVRIQAEDTAEGWALSGQVDWITNARAGGFLA
TAATAVPGGGMAIVALHSNVQGLTRHDDLPLLGLRASSTCALALADLPLMPGDLIHPDARQILPGLRPVLVGLQCGFAIG
IARASLGAAMGHRGVLTDAREALSARVQGLTADLVQGVRQERFITDPARLFALRIALAETAQQAVELELQTSGGKAYLHG
DGNGFARRWREAAFLPIVTPSLIQLKTELARLAA
>AHV91671.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MKHPQVTRLAALALAALPVPAALADTPAQLDAVTVTASKRDQKLDSINGAAYVRSSDALAANQVENTLQLGGVTSAQDFY
NPALTIYVDGVPQLPVAASQQLLDVDQVELLKGPQSTLYGRSALGGVLNIVTRQPDNETHVRASAGVASRDGYLFKAGAS
AALVEDMLYGSVSLATSDAPGRLSNPITGSDGVGGSSTNAGAAKLRLAPAGSPWEIGLAVSGECTRARQDAYVPFDDPGA
GQAYVMPGFRPARPISSSVAAAEVRPSTHSMTSRGGA
>AHV91672.1 C-terminal processing peptidase family protein [Bordetella holmesii ATCC 51541]
MSTRKFRGFGLVATGVVAGVLLSVGVTAVAQRGSPLPLDELRQLTNVFAAIKNNYVEQVDDKTLISNAISGMVSNLDPHS
AYLDADAFREMQTATQGEFGGLGIEVGAEDGFVKVISPIEDTPAARAGIMAGDLIIKIDDTPTKGMSLNDAVKLMRGKPK
STIALTIMRADRPQPIVIKIVRDIIKVRSVRSKMLDDGVAYVRIAQFQEKTGPDLARHLNELGAKGAPKGLVLDLRNDPG
GLLNSAIGVAGAFLPTDALVVSTDGRTPDARHKYLATPSEYSRGEGNYLNDLPAWAKTVPMVVLVNVGSASASEIVAGAL
QDHKRAKVLGNRTFGKGSVQVILPLSETTAVKLTTSRYFTPSGRSIQATGIEPDYVVADTADGDLFRLPREADLQRHLSN
QQSPNAEVKSDPTENPDSPAGKVFEFGGKDDFQLLQGINLLQGKPVQKGSARAQAKADIKPNATGTTQRLKITPSGVEPA
GKK
>AHV91673.1 phosphoenolpyruvate synthase [Bordetella holmesii ATCC 51541]
MISQLSGAGVRVPGGFATTAQAFRDFLTASGLDKRIADRLSTLNPEDVRELAVAGAEIRQWIIDAPFSAEFEQAIRDSFA
KLDADGKGSFAVRSSATAEDLPDASFAGQQETFLNVVGIDDVLDKIRHVFASLYNDRAISYRVHKGYAHAEVALSAGVQR
MVRSDKGSAGVMFTIDTESGFEEVVFITSSYGLGETVVQGAVNPDEFYVFKHALEAGHYPILSRRIGSKLIKMEFDPERP
EGRAVRTVDVPVSERNRYSLTDDEVIELARYAVIIEKHYQRPMDIEWGRDGVDGKIYILQARPETVKSQQSGNDVQLRYR
LKATGHVLATGRAIGQKIGAGPVRIVADVSEMDKVQPGDVLVTDMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGI
PAVVGCGDATDILKEGQPVTVSCAEGDEGRIYDGLIETEVEEVRRGSMPPIDVKIMMNVGNPQLAFDFAQIPNSGVGLAR
LEFIINNNIGIHPKAVLDYPNVDGELKQAVESAARGHASPRAFFVEKLAEGVATTGAAFWPKSVIVRMSDFKSNEYRKLV
GGSRYEPEEENPMLGFRGASRYIAEDFAECFRMECEALKKVRDEMGLTNVEIMVPFVRTVGQARKVVELLAAHGLKRGEN
GLRLIMMCEVPSNAILAEQFLEHFDGFSIGSNDMTQLTLGLDRDSGMELLAADFDERDDAVKFMLRRAIQACLAADKYVG
ICGQGPSDHPDFAQWLKDEGILSMSLNPDTVVDTWQQLAKG
>AHV91674.1 hypothetical protein D560_0819 [Bordetella holmesii ATCC 51541]
MAQAAKAVRIVPAMARRVPFPRISIFNSFPYAVSTAL
>AHV91675.1 methyltransferase FkbM domain protein [Bordetella holmesii ATCC 51541]
MVLDDWRELKRLGDERIARVRALEGFYVLWPRYCSAWTQHLHEVAQGSTYRADPRFLGFCEVGEKPTLPNAMIPVPPSQD
GAISMMEYLRRHSRNPRIGLMCFPGTHGEWALWRGVQGQFDYLAHMAASGAAHTYVPVEQERDHYLREIDSYLAMMAGMD
LLSQQTLAARIHAYLALDRGPLLRYMISADYQYFNGASPQCSFVPREQEIYVDVGASQGECLGRMAGLVGPGSELWGLEP
NRLDFVSLRSLSWLLPIRAERVVAGAHHGGSVEFYTDPDYPHGSRFVLPSDSVQWREDRKEWIEPLPAVSLDCLVPGQAT
MIKADVEGGELGILEGATRHLADSQCRLSIAAYHYPNDLLSLSRFMQSLGRKRHSVRGHHASVWDLVLYVHEDAR
>AHV91676.1 polyphosphate kinase 2 family protein [Bordetella holmesii ATCC 51541]
MEAQADPVLAKEDYKAREHQLRTALLKAQYDRLNRADRSLLIVVAGIDGAGKGQTINLLND
>AHV91677.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MFQIEGARFPQDRDALIAIIREYISSTRVSLEYQHYDEERDGLSGKYARPRGLMLLARKAGAVVGCGGFREIDATTCEMK
RVYVRPEARGQQLDRQLMERILDEARAAGYRRICLDVLPEFLAAQYLYESLGFHETPPVTQNLVPGSRSLGRDL
>AHV91678.1 efflux transporter, RND family, MFP subunit [Bordetella holmesii ATCC 51541]
MNTPTTHPARKRLLLIATGAFIVLALLYGAWWALYGSHFESTDDAYVHGNLVQITPQVPGTVVAIETDDTDMVKAGEPLV
RLDPADTDVALQQAEAKLAQIVRQVRTFYVQNDSLAADVDVRQADIGRAQADLNRAQSDLKRRQALAASGGVSGEEILHA
ETTLKTAQAGLAQARAALASAQAKQVTNQALTQGTSVENHPDVRQAAANLRNAWLASSRTVLPAPVDGMIARRSVQVGQR
VAPGSVLMTVVPLDQVWVEANFKEGQLRHMRIGQPVTMTADLYGSSVKYHGKVIGMDAGTGSAFALLPAQNATGNWIKVV
QRVPVRIALDPEDLKKHPLRVGLSMDVEVDVGKDDGPALTAARSEPAWSTRAFDAAHGEVDALIAKIIKDNLQS
>AHV91679.1 acetyl-CoA carboxylase, carboxyl transferase, beta subunit [Bordetella holmesii ATCC 51541]
MSWIEKLLPPRINKTSDSGVRRVPEGLWVKCPSCESVLYSEDLAANLHVCPKCSHHMRIGARTRIDSLLDVEGRVELGQE
TRSVDSLKFKDTRKYPERIQEAMKQTGETDALVVMSGSIHGVPATLACFEFEFMGGSMGSVVGERFVRGVKAAIEHKTPF
ICVAASGGARMQESLLSLMQMAKTNAMLTQLAQAGLPFISILTDPTMGGVSASFAFMGDVVIAEPRALIGFAGPRVIEQT
VREKLPEGFQRSEFLLQKGAIDMVVDRRQLREELARLLALLTNQPADLVTTT
>AHV91680.1 hypothetical protein D560_0136 [Bordetella holmesii ATCC 51541]
MAVDGKLVDKPIAKLAQAIVDEAQAAAVPRPQDAARPTGLTTGI
>AHV91681.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MTGLYVEHSTWLQGWLRKRVGDTFAAEDLAQDTFLSLLDGKIVPGEIRQPRPFLATIAGRLLAHRHRRQLLETAYLEALA
CLPEEVAPSPERRLLALESLQQIDRVLDGLPAKVREAFLLAHLFEMTYAEIAERLGASSSSVKQYLTRANQECLFALAL
>AHV91682.1 AMP phosphotransferase [Bordetella holmesii ATCC 51541]
MDPRHIHTLAFGEPDDVEAEFPPYWRYWNAMPAKGETGIVFGSWYVRLLRECYRKKARPERVEALAAQIRRFEGMLTTEG
VQIVKLWYHLSAKAQTERIKRLKSSPETSWQVSPDDYRVAKKYDRICDAAHIALAHTDVDHAPWVVIPSADDHLRVVRTT
ETVLATMKRRAIPLVAHAGLDRPRLGPVANRLADLDYDAHEDKHDYDSELGLLQGRLARAVRSEKFRERSLILAFEGQDA
AGKGGAIQRVVQALDARQYDITPIAAPLPHELARPYLWRFWRHVPRQNRIALFDRSWYGRVLVERVEKLTPPGLWRRAYA
EINDFERQLTDNGAILIKFWMAITEDVQLARFKEREKTPFKRYKITPDDWRNRKKWQEYAQATNEMLARTDLPHAPWYAI
PANDKRYARLQVLRHIVETLEQHV
>AHV91683.1 alanine racemase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MATRLAAIEQRIALACDRAGRPAGCVELLPVSKTFSAEAVREAAALGLRRFGENKTQEIRQKADPLAELGLSWVMIGHLQ
TNKVKDVVRDVAEVQSLDRLELADALQRRLETASRSLDVLIQIKTSPEPSKFGLPPRNCPPCCRICSSPARRYACRA
>AHV91684.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV91685.1 nickel import ATP-binding protein NikE [Bordetella holmesii ATCC 51541]
MLHVQDLEVAVASEDRLAHVVKRLSFAIERGETFALVGESGSGKSMTALALLRLLPDAGRIVGGQVNLQAQDLNRLSERQ
MRDVRGGQIGIIFQEPATSLNPVMRIGQQIVETLIAHTALRGAAARRRAIEWLTRVGIPEPDRRIDDYPFQFSGGQKQRI
MIAIALAAEPRLLIADEPTTALDVTVQAQVLELLADIQREIGMAVLLITHDLAIVRQTAHHVALMRGGEIVEAGDAATFF
AAPRHPYARQLFEAIPTFEKRGRPLSAVRPVGSALGAAPNRPSPASPGQVVLDVQDLRVHYPVREGVLRRPVSWIKAADG
VSFSLREGETLALLGESGCGKTTTGKALLRLIDGARVTGRALLAGRDLLTADRRTMQALRREIQIVFQDPYASLDPRMRV
GDILDEGVASLHPELSAAQWQARAQDLLQRVGLPADTVRRYPHEFSGGQRQRIAIARALAVEPRVLICDEPTSALDVSVQ
AQILDLLRELQAELGIAYLFITHNFGVVEYLADRIAVMAGGRIVEIDEAATVLQRPGHELTQRLLEAVPRLVFGPVQGG
>AHV91686.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MQAQGLGKRFGGLRALTDVSFDIEAGEIYGLIGPNGAGKTTLFNVLTGLYVPEEGRCEFNGLSIVGSKPHQVAQAGLART
FQNIRLFANLSAIENVMIGRHARTRCGVLGAVFRSRAQRIEEAAIEQRAHELLDYVGIGPRANDLARSLPYGDQRRLEIA
RALATDPRLLALDEPAAGMNASETLVLRQLIEKIRDDGITVLLIEHDMKLVMGLCDRVLVLEYGKVLSMGRPADVQRDPK
VIEAYLGAGAATDPLLHLSTEQPS
>AHV91687.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGLPSRRKAVVYSAG
>AHV91688.1 hypothetical protein D560_3428 [Bordetella holmesii ATCC 51541]
MKKTASQPSNPPAASLFAANLAYCQRLATLAQESQGRWAALAQQIWRDHASQYQATLAPLAQTQEWQALAPAIGDLARNQ
WQARLNTTSALVHTVLSEQAALAAGVSQAANAWLQDAGDACNGLSGSPAGKVWAALAEQMSAATQSLQAMGARDER
>AHV91689.1 copper-translocating P-type ATPase [Bordetella holmesii ATCC 51541]
MKRVQNALAGVPGVTEASVNLATQTAQVQLKDTDPQALLDAVARVGYEAHALTANDHHAEALANQRAAEARHLKRAFCWA
LALTLPVFILEMGSHLFAPMHHWVTHTLGEQTSWMVQFALTTLVLLGPGRAFFSKGFAALWRRAPEMNSLVALGSGAAWA
YSVVVLFAPQWLPEAARNVYFEAAAVIITLILLGRMLEARAKGKTGAAIQRLIGLQPRTARVLREGQTVDIPIERVRAGD
IVMVRPGEKIPVDGEIIDGHSYVDESMLTGEPLPVEKQAGAKATGGTLNTSGSFNLRVTHTGADTVLAHIIRMVENAQGA
RLPIQGLVDQVTGWFVPAVMAAATLTFLVWLIWGPSPVLSHALVAGVAVLIIACPCAMGLATPTSIMVGTGRAAELGVLF
RQGDALQSLRDVRLVAFDKTGTLTLGKPKLTDIQPAEGMQGDTVLGWLAAVQMHSEHPIAHAIVAAAQQRGLHLPAAQGF
EAVTGAGVRASVEGHHIVSGAARLMQAEGVDVSGFGDLARDWGDAGKTPIYVAADGKAIAMMAIADPVKPSARSALQALH
RLGVRTAMITGDNPHTAAAVARELGIDDVHAEVLPDGKVQALQALRAASGKVAFVGDGINDAPALAAADVGIAIGSGTDV
AIEAASVVLIADDLRGVPNAVAISQATMRNIRQNLFWAFAYNAALIPVAAGALYPAFGLLLSPIFAAGAMALSSVFVLGN
ALRLKTLRPIGDRV
>AHV91690.1 type I phosphodiesterase / nucleotide pyrophosphatase family protein [Bordetella holmesii ATCC 51541]
MTSTDSAQNILIIMDDEHNKKVLGYNGHPVVKTPNLDRLAARGTVMANAYSSSPICVPARAAFATGRYVHDNRCWDNAIA
YDGTMPSWAHVLRDAGHCVTSIGKLHYSSDEIDGGFSEQIIPMHIEAGVGDLYGLIRDPLPTRHQSADLARSIGPGESSY
IRYDRDITEKTVNWLNTQGRKSHDKPWVLYSSFISPHSPLIAPPEFYAMYDARSIELPRKDVKYHPWIQAWNKCYGFDSH
FGSDDQRRIAIASYFGLCSFLDSNVGKILYALEETGLAHTTRVIFLSDHGDNLGARALWGKSTMYEESAGVPMILGGPGV
APGRRVNTPVSHVDCYPSILQTVGASSLIPPDLPGRSLFDIAAEPYDPARTVFSEYHAAGGVSAAYMLRQGDYKYIHYTG
FAPELFNLAHDPEEVHDIATQPQVQDVLHDFDRQLRAICDPDATDLDAKKDQARLIAAHGGVEKILARGGSSYTPIPGEA
VQLIGNA
>AHV91691.1 phage integrase family protein [Bordetella holmesii ATCC 51541]
MRLDITKNSSPRTVPLTKAATAAFQTATDNPTRPPETDLVFFGDPGRDGVRQPYLFDKARTDAKKEVGLTDFRFHDLRHE
AVSRLVEAVICSP
>AHV91692.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MEPALEPIAEEPRRDLFLIALGERVRRLRAIRGMTRKSLSQATGVSERHLANLEHGVGNASILVLLQIARAFNCALAELV
GDVTTESPEWLLIRELLSGRSESDLQRARESLSQLFGVGAGAQRPNRYQRVALIGLRGAGKSTLGQMLADDLGYPFIELN
REIERVAGCSILEIHNLYGPNAYRRYERRALEEAVQIYPEMVLATPGGLVSEPATFNLLLAHCYTVWLRATPEEHMSRVM
AQGDFRPMSGNGEAMADLKRILAGREAFYAKADLTWVTSDLSLPESFGGLRTQVRKACSLPL
>AHV91693.1 glutamyl-tRNA reductase [Bordetella holmesii ATCC 51541]
MSVAVLAFGLNHTSAPVSVRERVSMPVDLVKPALEGLRLAFGGAVREAAILSTCNRTEIYCAADATVAEKLPVWLADHHS
LDAGSLHPHLYRLRQDEAVRHAFRVASGLDSMVLGEPQILGQMKDAVRAAEQAGSLGTLLHQLFQRTFSVAKEVRSQTEI
GAHSVSMAAAAVRLAERVFGNLDQARTLFIGAGEMIELCATHFAAQRPRSMVVANRTVERAESLAGRFLAGTMKLADLTE
RLAEFDVVVSCTASSLPILGLGMVERATRQRRHRPMVMIDLAVPRDIEPEVGRLDDVYLYSVDDLGRLVQSGTDARRAAV
VQAEAIIETRVQGFMHWLQSREVVPVIRDLHQAAEDVQAAELERARRMLARGESPEAVLEQLAHGLTQKYLHGPLAELNR
SAGDERKQLLAWVPRLFPGRDSRR
>AHV91694.1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein [Bordetella holmesii ATCC 51541]
MHAVFIDANPTLAAVAQRLHRQGDPDLTINGQPDIRPEQIPAVLDGAGIAIIDHTHLPTDVARNCKGLKHVVFLGTGARS
YMNPEELAGLGIEVHIIKGYGDTAVAECAFALMWAAARDFGKMDRGMRAGQWLRTDAVQLTGKTLGLLGFGGIAAEMARL
AQGAGMKVLAWNRSAKTHPGVKFMQPDELLAQSDVLSVHLLLNDATRGWLSAERIARMRDGAILINTARGALVDEAAMIA
ALKNGKLRHAGLDVFDIEPMPADHPLYSLDNVTLSAHSAFRTPEASDNLIEAALQHCRRVAAG
>AHV91695.1 fimbrial family protein [Bordetella holmesii ATCC 51541]
MMTTPPAYAVDGTITISGEITDQTCKINGNQPPYNLVVTLPKIGTKAIPNVNDTAGATPFEIKLSECPDSLNTKAIKAYF
EPGLTTDYGTGNLKAYSTTAAATVQSSIPSAPGTIFKSVQIQLANPNGATLKVGVDTTAQAAQSTTVTNKAATLRYLARY
IRTSSEAITAGKLVSYVQYSIVYP
>AHV91696.1 EAL domain protein [Bordetella holmesii ATCC 51541]
MLLVSLPVALVLGCLMSWAVFRLQMQRMSFHDQIHRGMRAGEFHMEYQPIQGIGSDRCEGIEALMRWERPGVGAISPEVF
IAAAEAEGAIVPLTRHALRLIERDLPLMGLPPGFHLSVNVAAEHLLRADFPADIEAFAQQVAPNAPHLVLELTERSLVEN
SGIVQQHIRTLRAAGLSVAIDDFGAGYCSLSYLQQLPVDYLKIDKVFIDAITDADQDSPILELILALASRLGLSVVAEGV
SAQTQLDYLRQRGVGYVQGFLVSPPLRAAEFAHWYRVKGHRPLA
>AHV91697.1 gntR-family transcriptional regulator [Bordetella holmesii ATCC 51541]
MYRQIKDLLVQSLERGEWMPGELIPSEIDLAARFQVSQGTVRKAVDELAAEHMLLRRQGKGTFVATHHEPRVRYRFLRLA
PDEVNEAGRAENHILDCRRLRAPAEIARALELRAGETVVSIRRQLAMNHAPVIIDDIWVPGASFRGLTLELLKAKRVPLY
GLYESEFGVSMVRADEKIRAVAASEEVATLLHVTPGTPLLQVDRISYTYGDRPMEVRRGLYLTDHYHYRNSLN
>AHV91698.1 ubiquinol oxidase, subunit II [Bordetella holmesii ATCC 51541]
MEILSPKGDIGAQEKTLLLTALGLMLLIVVPVIFLTLYFAWKYRASNTNAEYLPKWSHSTRIEVVVWTIPCIIIVILAVL
TWKSSHELDPYRPLESTAKPVTIEVVSLDWKWLFIYPEYGIATVNQIAFPVNTPVNFRITSQSVMNSFFIPQLGSQIYSM
AGMETKLHLNAFEEGDYAGLSANYSGGGFSGMRFRALAMSQQGFDDWIQKAKAANQALTPEVYAALIKPSEHNPVALYSD
VPVGMFDYIVHNQMSKMAGVDPATCTPASKNLIAVAE
>AHV91699.1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein [Bordetella holmesii ATCC 51541]
MAEALPGADWLILACPLTARTQNLINREALALLPAHAMLINVARGHVVDETALIERLSSARLAGAFLDVFQQEPLPADSA
LWDLDNVIVTPHSAAFSSGNADRVRGIFLDNIRRLARGEPLRNLFKL
>AHV91700.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELRDLRYFEVIAELGNVGHAAQMLHRTQPALSSSIRRLEASCGNALFERSGRGLRLTPAGEVLLRWAKRLKHDVQDAKR
EMTDLGQGIRGHVRLGIVPTAAQFILPAAVKQLLRTSPGVTLSTVVGVRDELTVLLSAGEIDLMVISEHSAQAGFVSEPL
HSDHVVVVACANHPLLQQAKLTLKDMTHYDWVLQQPGSPTRAWIDQTFDSHNLPRPRVRLETTMLLMLPALIAATDWLGF
FSVHRGIAWSRA
>AHV91701.1 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MFVPGLDVRAQMSGLECGADALVADLEEFTRPQDRPQARLRLVTLMQECRDRQVVAAVRINKLDADGLADLDGVMAGAPD
AIFLPHAESPEQIAELDAAISAREQALGLPLGRTEIVPTLESALGLVRAYAIMTASARVSACLLAAEDLSASLGAERGPD
GQELHAVRARFLVDCTAAGCLPIDCPFNFRDAASLHADLRWARRLGLKSKCATFAEQVQHIHEVFTPQPLEIAQAQECVT
QRDADLAAGVPSTIDPPSTTRRDACLRVTPNSNNGLKRLKEYRHESDTGRTQRGSDPDAAVAHSWCAAYFHDPWRELPPL
HRRAQRAQRRHRAHRLPPGKRRGLHGRGLRQADGRTRHLLRDAGPGATNASIGVHTAFQDSTPMILFVGQVGNDFYEREA
FQEIDYRRMFGQMAKWVAQIDRTDRIPEFIARAYAVATSGRPGPVVLALPEDTLWGRAAVADMPRYQRSHSHPGAGDLAR
MTALLDAAERPFLLLGGSGWTSTAMAQIADFAQRFELPVGTAWRRLECFDQNHANAAGHVGWGMTPALRERLLQADLILA
VGTRMGEATTEGYTAIESPLPKQKLIHVYPDATELGRVFAPTQAIVADVASFAQAASQLHPGHPRSRAHLVTQARQEYLD
STLPLPSPGPMSLDEAAVSVGTRIPTDACITVGAGNYALYPHRYRRYCGPGTSLAPTVGSMGYGLPAAISAKLERPDRTV
VCYAGDGCFQMNMQELGVALQYRLGIVVLVFNNGMWGTIRAHQERDFPARTVALTFQNPDFTQVIRGYGGYGEAVERSED
FAQAFDRALAFADREHLPALLEIRYDPDGIAPGQTLSAIRQTALARQQ
>AHV91702.1 mmgE/PrpD family protein [Bordetella holmesii ATCC 51541]
MSEHITLMSNAKPTRALAQWCAGLRRAHLPADCLQESSRHALDTLAACAAGMQQPLVRAAIELERRINPTQGTVPLFGGP
QRWTVIEAAGLMAMACHALEMDDGNREGSIHPGTTIVPAVLALAWHTWADYLQFLTAVTAGYEVAISIAETLHPHASRRG
FQTTPVAGVVGTAAACATLLGLEAEQIESAMGLPASAAGGLFAYLEGGGNVKKFHPAHAAREGLRAALMAQQGAAVGPVG
SIEGPSGILEAFGGIQGWDGNQARARNAPAIMRSYLKPYPCCRHIHPAIDAILALKAEAGWNAADVESIEVCMFGAAMPH
AQLPWNTLEIAQLSFPWVMALACLDGEVTLAGFSQQARARADVNALAAKVTVRQDEECDTLYPAYGPARVTLRLRSGRQF
SKWVADPLGSADLPISDEALDTKAAQAFALSFASGRPAELIRMLRDVQPWPLVDLR
>AHV91703.1 ferric uptake regulator family protein [Bordetella holmesii ATCC 51541]
MSAPARNSRADDVGEQLRLAESLCAERGRRLTPIRRKVLELLLTHGRSLKAYELLDAMRAVHPGAAPPTVYRALDFLMDE
GLIHRLDAVNAWTACHDAAGAPHDLLVVCTGCGAVAEVSDPAMSRQLAERVAQTGFALATHETEIRALCPQCQKNAPPAH
GHHHHH
>AHV91704.1 NMT1-like family protein [Bordetella holmesii ATCC 51541]
MLAGAAATSLIGLPALAQPRLGKAVYGQGSIDPFFTAGYVALKKGYFGANGLDVEYLNSQSGPRTNQLLAAGQILFGATA
ATAATAAPALTLAGKPATLIFGFDRKLTYANVIVRKEDYDSGKVRELKDLAGKRMGATQPQSSTWLMAVYLMQKAGVGDK
VDIRPLGDLATMLGALKTGSVSASMATMSMMEQAKAEGWGVPIFDATTDASWQAFMGGDVPGIAALTLRDTVERRPEVVQ
AFVSALVKAQDFISTHSAAEVTDAIYADYLNAFPRAAIEKTIGVYQNSVFLKDNLITEDAYARLLGIMGDGRQFSNEELK
RAPYSLCVDMSFVRKARGL
>AHV91705.1 hypothetical protein D560_3793 [Bordetella holmesii ATCC 51541]
MKSRLMRLAGATALAALTATAATPALAGGPGWGGATVQAAITEVTGVDIPAGGPPPIAGSSAAPSA
>AHV91706.1 aldo/keto reductase family protein [Bordetella holmesii ATCC 51541]
MELSRVGLGTSAMGGAAWAYGWGEQDDSDSVRAIRHAVDRGINWIDTAASYGQGHAEAMVGRALAQMPASARPYIFTKGG
LIMRDGQPYGIAQPDSLRRELESSLQRLGVDCIDLYQMHWPAGDGTPLEVYWQTLLDFQREGKVRAVGLSNHGLPQVQTA
EAIGHVDVLQPPFSLIRREAAADLLPWCESTRTGVIAYSPMQSGLLSGAFTASRQLAANDWRSRDSEFRVPRLERNLALA
DALRPLAERHGTTLATIAIAWTLAWPGVTGAIVGARNPAQIDGWLGAAALELDEEALRLIADALALTGAGSGPLEPPAFD
SLPTPADFLR
>AHV91707.1 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein [Bordetella holmesii ATCC 51541]
MLLMIDNYDSFTYNLVQYFGELGEDVRVARNDQITLEEITAMAPDRICVSPGPCSPAEAGISVPVIRAFAGKLPILGVCL
GHQAIGAAYGGDIVRAQTIMHGKTVQIRHTGTDIFQGLPTPYTVIRYNSLTIDPATLPDVLEVTATAPDGDIMGVRHKTL
PLYGVQFHPESVLSEHGHAMLRNFLNI
>AHV91708.1 putative pilus assembly protein [Bordetella holmesii ATCC 51541]
MQARQLNLLAYIHRAQLAHQVAMAHLVTLVSWHQLGQTQSTRRAIGNPPAFLIAKLFGPRFARSYGVFPSRAAPYSYGPG
ALQASLQRHDAVVHRILAQVAREQWRQMTSLRDAHMQRVLQANYVSSTSSHSGVPAMQVRDDTFPRLLSWQSPSDGQGIE
ALTHVVTRRFAFLRPRDLTWASAWIVQLRCPNTRHQLRRRGHTFLDAQGRWGASDTLSFHALRSNRWIGCYFREYPMGWA
TTGSTRWQRGRHYVERPLTEFSSQDFWRWYSQHSGLHARAWRNNPLASSYAVRDRYAPAAGAGLPDVLGLSPQGLQQAKS
RFRLNLRTSLAVSDLGQQWRLSWLGRDDAWWRTRPLVRSSVAETYFAPPPSAMGTPELPSLFRPYWQARLAADPALRTGA
TP
>AHV91709.1 hypothetical protein D560_3840 [Bordetella holmesii ATCC 51541]
MIAMAHDFTLIYALSPELDLQDEVLSRLASSDCADATVSWG
>AHV91710.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MERVSSGENLVGYNILGSYAEARAKNDASLGIVYPTDYALVLSRVAFISKKAKNKNAAKLWMDYLLSKKGQEIVANRAEM
ASIRDDIDGDNDVDGMTKKLGSALKPIPVNDSLLEYLEQNKRLDFIKQWRAPKGGEPPYL
>AHV91711.1 transposase family protein [Bordetella holmesii ATCC 51541]
MKKSKFTDSQIIEAIKRAEAGLAVPELCRELGISSATFYKWRSKFGGMDVSMMSRMKELEAENARLRKMYVEERLKAELR
AEALEKKW
>AHV91712.1 putative ferredoxin-2 [Bordetella holmesii ATCC 51541]
MTYRIEWPGVASDEQADGWILPCVAYAESNLVLQVPDAEPLPPAPDVARQQLTGARR
>AHV91713.1 hypothetical protein D560_1193 [Bordetella holmesii ATCC 51541]
MLAALGYDPLSLDALAELSATTAAEVAVELTELEVQGWVARMDDGRYQRIR
>AHV91714.1 hypothetical protein D560_2761 [Bordetella holmesii ATCC 51541]
MFDETARFSPNPKGVAFAFDDRGGDPCVGWVSVDALAELMGKDLSQSEALAAYEKHFCRIHAIVERKISVSQGSRVFVED
LFGA
>AHV91715.1 periplasmic binding domain protein [Bordetella holmesii ATCC 51541]
MKHNNPFKALVLTAALLASASALADDIKIGFNSDMSATGSADFGISALAGARQAADEINAAGGVLGKKVVIVARDDVGAP
PKAIQNTNELVDNEKVNAMLGGVNSGNMLAIDSDAGRLLDRFATYEPPTVSKWISPDEN
>AHV91716.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MFSASQDDVHRLYAEHHGWLNGWLRKKLGNSFDAADLAQDTFLRVLRHRRELSAVREPRAYLVTIAGRLLLNHYRRRSLE
RAYEEALAVLPLECAPSPEQRLLVLETLDQIDALLAALPAKTRTAFLLAQIEHLSHAQIAEQLQISVRTVQRHILRAYEQ
CILALNDA
>AHV91717.1 proton-translocating NADH-quinone oxidoreductase, chain N family protein [Bordetella holmesii ATCC 51541]
MQSHIDFALATPEILLLVLALAVLLVDAVSTHPERKTTYVLTLCTLAVLTVVSLLQWKNGVSGKTFNGMYVTDAFSHLLK
ITSYIAVAVTLIYGRLYAQAREMLRGGELYVLTLMALLGQMVMISSGNLISIYLGLELMSLALYALIALRRDDAVATEAA
MKYFVLGALASGFLLYGMSMVYGATGHLDLAEISRVIAAGQAQALPLVFGIVFLVAGLAFKLGAVPFHMWVPDVYQGSPT
AVTLILGGAPKLAAFAITMRLLVDGLHGLAADWQPMLMILAVLSLAIGNLTAIAQTNLKRMLAYSTISHMGFVLLGLMAG
VVDGKPDASSAAYGASLFYMITYVLTTLASFGIVLLLSRQGFECENIDDLKGLNRRSPWHALIVLLLMFSLAGIPPLVGF
YAKLAILQAVVESGHVALAVIAVLFSLIGAFYYLRVVKVVYFDEPVGEAAPVTGTCLQRGVLSINGALILLLGILPGGLM
ALCVQVIRSSIGG
>AHV91718.1 transcriptional regulator PadR-like family protein [Bordetella holmesii ATCC 51541]
MRHPAPGRGEPGEADMTRGRKVSAEDLQLILLALLELNPSHGYELIKAIGALSKAYYTPSPGMVYPALTYLEELGLVTVE
PQGSKKRYHLTTDGLAHLSANRAQAELLLERLRHIGRKMEWMRQAWSAEPRQTGPQGEDLATGWVPEFVEARQALRQALL
LKSGASPAEQRRVAAILRRTAQEIDHPPCSR
>AHV91719.1 resB-like family protein [Bordetella holmesii ATCC 51541]
MIADVPASGRLPLGNPSFRANVLVPEGAERNTALVMVGDGVLVQPLPFTLKLKKFDVEYYSTGMPSRFASHVEVIDPQDG
HTFERVIEVNEPLRYKGVTVYQSNLDDGGSKVTLTGYPLRGAAAQPFTVRGTVGEGNDLSASVAGQHTESLILNITALRP
INVEDITGGDPQGGKQSFGEHVAAVTGSAAGRKNDHLRNLGPTIEYQLVDAAGQANEYRVYMLPVDLDGLPVILAGVRQN
AGQSYAYLRIPADANGSPAEFMKMRAALAEPAVRAEAVRRFVERNLPPGADRQALTEAAARGLDTFAAGGLRALSELLQT
RTDAADVERAANVVLRLLNSTLYDVRAIMREREHLPVLPDVGPQAELAAQWQQAALGALSDLSIYPAPILLTLSDFQQVQ
ASGFQVSRTPGKNAVYLGCLLLIVGIFSMFYIRDRRIWIWITPQAAGSQIHAAMTSQKRTLDYLQEFERFRAALTDPPRG
DR
>AHV91720.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MAFICDPRVRGGLHHPDPVSLVEKPAKICFSFKGFLKMAAERVEDLRIFVSAAAAGSFSAAARELGLTPAVASAAVKRLE
GALGVRLFVRSTRSLRLTVEGERYRDHAHAALAALAAGRGSVQRDRHSISGKLSLSMPSDLGRHMLLPWLDDFQREHAGI
RLQIRISDRLTDLHRQGVDIAIRYGDPGDSTMIALPLAPDNRRVLCAAPEYFARRGMPRVPEDLHNHNCLTFMLSDAPHD
RWRFERDGKHTDVAVEG
>AHV91721.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRLAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLNRPGFLRQSRSSKSSAVRTLPEKPGRYSCGAVVGCRTTRYSQTHRRVPGREWNRSCV
GFFHA
>AHV91722.1 respiratory-chain NADH dehydrogenase 51 Kd subunit [Bordetella holmesii ATCC 51541]
MTGPVRIYVPRDAAALAVGADAVAQAIMAEAARLEQSVELVRNGSRGLLWLEPLVEIQTPQGRVAYGPVTTGEVSALFAA
GWLGGQTAHPLCQGFTEDIPYLRRQERLTFARVGITDPLSILDYAAHGGLAGLERALTMTAAQIVEAVTASGLRGRGGAA
FPTGVKWNTVLNASSPTKYIVCNADEGDSGTFADRLLMEGDPYALIEGMTIAGLAVGAEYGYIYVRSEYPHAIATLRTAI
QRAREVGWLGDDIHGSGRRFDLDVRQGAGAYICGEETSLLESLEGKRGVVRAKPPLPAIRGLFGQPTVINNVISLATVPT
ILARGAAYYRDYGVGRSHGTLPFQLAGNIRHGGLVEKAFGLSLRELLYDFGVAAPAAGHCALPR
>AHV91723.1 TRAP transporter solute receptor, TAXI family protein [Bordetella holmesii ATCC 51541]
MSLKTWIKTLTLAVAIAGTATSAQAQQFFRIGTGGTAGTYYPIGGMIANAVSQPGKLIATAAASNGSVANINGILGGSFE
SGFTQSDVAYWAYNGSGTFEGKPKAQDLRLVATLYPESIHLVTRKGSGIKSVADLRGKRVSMDEPGSGTLVDVRLILGAY
GMTDKDVKAEYLKPNQAGDKIKDGGLDAFFFVGGAPAGAIAELASSAGIEIVPLVGPEIDKLRADQQFFTPDIIPANTYQ
GVGETKTISVNAQMVTSAKQPEETVYEIVKAMYSDPTQKTLAAGHTKGKLINKENAVKGADIPFHSGDEKYYKEAGLLK
>AHV91724.1 hypothetical protein D560_1724 [Bordetella holmesii ATCC 51541]
MKNNPHRALPMPGSRSLTQFRSVRIRRVAFHWRRRQDEAAVPPTDEGSKAPG
>AHV91725.1 tyrosine recombinase XerC [Bordetella holmesii ATCC 51541]
MTEDAAPLFAWLRHLQTQRRYAEHTLSAYRRDLQCLADVAQKHGVPLAALSTGHIRQAIARLHAQGLGPRSLARRLAAWR
GFYHWWAPQAGLPSNPVAGVRAPKAPRALPKALSVDQAQALLDHAPATLARDPAGLRDHAMFELLYSSGLRLSELVGLDT
HYQRDAGEDPRGWLDRAEAEVIVLGKGGKRRTVPVGKAALDALDQWLAARGTLLAATTPAADQHALFLGARGARISPRVV
QQQLGRLAQAAGMPAHVHPHVLRHSFASHVLQSAQDLRAVQELLGHANIATTQIYTRLDFQHLAKVYDQAHPRANRKPGG
KD
>AHV91726.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MSISPGIVDDLAAASPELSPAQTRRALFALGVGGFGIGTGEFVIMGLLPDAASDLGVSIPQAGHLISIYALGVVIGAPLL
AVLGARWPRRSFLIGLMLVFALGNFVSAAAPGFASMATARFFTGFPHGTFFGVAALVAAGLVPIYKRTQAVAMVLLGLTI
ATLVGVPIAAAIGQWLGWRSAFAIVGAIGLLTALLVWRWVPYMPGNKAASPLRELDALRRKQVILTLAIGAIGSGGIFSV
FSYIKRTMIEVAHMPEAWVPAVLALFGVGMVSGNLLGSRFADRNIELTIRYVLIWAAIVLTAFFLTSHSAILGSINVLLI
GTIVALGSTLQTRLMDVAGDAQTLAAALNHSAFNVANALGAWLGGVSIDAGLGWSSTGWVGGLLALAGLATHYWALADMR
KRAR
>AHV91727.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MDSPLLSLQGLEMRFERKVDLAGRIANCFGAGLKNQVVQAVAGVDLDVGAGEVIGIVGESGCGKSTLGRMVAGILPPTAG
SIRYRGEDVARLNAPSRRRYELAVQMIFQDPYASLNPRMRVTDIIGEAPVAHGLVRRAERDAYVAGLMRQVGLDPTYAQR
YPHQFSGGQRQRIGIARALALQPTIIVCDEAVAALDVSIQAQVINLFEQLRRELGLTYLFISHNLGVVAYISDRVAIMYL
GCIVELASTERIFGQANHPYTQALLRELPTLDTARREYRPIQGELPSPLAPPQGCAFHPRCPNALPLCRQQRPVLREISP
GHWSACHLNGVP
>AHV91728.1 polyhydroxyalkanoate synthesis repressor PhaR [Bordetella holmesii ATCC 51541]
MTQAQSDAPQRLIKKYPNRRLYDTQTSSYITLADVKQLVLADEAFQVVDAKSGEELTRSILLQIILEEESGGMPMFSSTM
LSQIIRFYGHAMQGIMGNYLEKNIQAFMEIQQRMAEQSKGLYGSQFGPEAWTQFMNVQTPMLQKMMNNYIDQSKNLFVQM
QDQMQDQTRAMFANFPFQPGQGPGRK
>AHV91729.1 TRAP transporter, DctM subunit [Bordetella holmesii ATCC 51541]
MSQLMIVSMLIFFGLSIPVAIAIGLAALTGISVGGLPWLVFAQQIFAALDKYPLVAIPFFILAGNLMETGGISERMVEFA
KSIVGGVQGGLACTCVLTCMIFAAVAGSSVATTFAVGAILIPAMVRHGYPKPFAASLQASAAELGVIIPPSIPMILFAVA
TDTSTGELFIAGVMPGVLIGLALMFYVWFYAKRNGLGKRDGEGRLPLWPAFKRAWLALLMPVIILGGIYGGVFTPTEASV
VAVVYAIVVGKFIYRRLTVSDISVTLHKSVVSTAVIMFLIANAGVFSFLLNRAGIPDILGAWLSQLFDTKFGFLMGVNVA
LFIIGMFVETSASIVVLAPLLLPVAVKFGVEPVHFGVIMVVNLALGMVTPPFGVNLFAACAVAKLSVEQLIKPLVPFVVV
VLICLMIITYWPGLSLGLRDLVYAK
>AHV91730.1 DNA topoisomerase IV, A subunit [Bordetella holmesii ATCC 51541]
MTDSNQAGLFDAPSGGDDAAITLGLYAEQAYLDYAVSVVRGRALPDVGDGQKPVQRRILYAMQAMGLQSGSKPVKSARVV
GDVLGKYHPHGDQAAYDAMVRMAQDFSLRYPLIDGQGNFGSRDGDNAAAMRYTEARLTPIARLLLDELDEGTVDFVPNYD
GSQQEPQMLPARLPVMLLNGASGIAVGMATEIPSHNLREVAQACVALIRNPKLPDAEILQIIPGPDFAGGGQIITPATDI
AQIYANGRGSLKARARWQFEEMARGQWQLVVHELPPGTSCQKVLEEIEELTNPKVKTGKKALTPEQQQSKAMMLALLDAV
RDESGKDAAVRLVFEPKTSRVDRDEFVNTLLAQTSMESNVPINLVCIGTDSRPRQKGLRDILEEWVAFRTDTVLRRTRYR
LDKVLDRIHVLEGRMVVYLNVDEVIQTIRESDEPRQALMTRFNLTERQAEDILEMRLRQLARLEGFKIEQELADKREEQV
RLQDLLENPSSLKRTLIKEIESDAKQFGDERRTLIESAERAVLETKVVDEPVTVIVSCNGWLRARQGHGHDAGQFSFKQG
DDLYGAFECRTTDTLIAVGDNGRVYSVAVSALPSARGDGQPVTTMIDLEAGTRIMHTIAAATDSRWLLATRSGYGFATKL
SDMSSRQRGGKQFVTLDKGDALLRPVPLFEGARQLALLSSKGKLLVFGLDELKSLSGGGRGTILMGLEANDPLDQAVPIG
AGGLRAAGIYRNKATEDILVGATLAPYLGKRARKGRALDVRPKQPLLSPVL
>AHV91731.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MDFHTLIKGHAARSPQRIAYQDQDRALDYAGLLREVDRLAGLMHEQGARRGERLALWMPNSMEWLITFLACAWLGMTVVA
VNTRFREHEVAHLLERGRCTWLAMWPDFKGLPFVDILRHIDPATLGRLRGVIAVGERQALATIATLPAPLAFDANPAVLP
ARIEDPGQESDGALVYTTSGTTSAPKLVLHRQAGLLAHGHIVAQAFGIDTDSTVLLASPLCGAFGFSTMLGGLTQGATLV
SLAVFDASATARQIRDHGVTHTFANNEFIDHILRQAADQPQPYPSLRYVGFASFSPAMDDLPERARQAGLPIAGLYGSSE
LQALVAGHTLQTDWAHRRVAGAPFRRRRAVCVRSTPTADPYCPTEPWGISRSKRPASCPSTWTTPRRPARPSVPTAISAR
AI
>AHV91732.1 phasin family domain protein [Bordetella holmesii ATCC 51541]
MSAIPQHVLARQKSAIQTLVAAQTAVFGGFEKLIDLNLKVVKATLDEVAQKSQQAVDLKDAQDAASFGTGLVQPSAEKAL
AYGKHVYDILNGVQVDLAKLAEEQIAEGQQQMQEAVEQFSKNAPSGSESAVALMKSSLATANSAYDSLTKAAKQAAEVAE
SNLNAAANATFKAASDAADVATKAAGRTRRSA
>AHV91733.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MSTTQTWRIRALSASDLDTHLTALADVLQACVAGGASVNFLLPYSLQSATAFWRDKVRPGLQDGGVYLLAAWRGDTLEGT
VQLDLDTPPNQPHRAEIRKLLVHPRARRQGLARALMLEVMVTCSP
>AHV91734.1 triose-phosphate isomerase [Bordetella holmesii ATCC 51541]
MHGSLAENASLLAALRAADPVSHCEIGVCVPFPYLAQTHAELSGSTVSWGAQDVNAQAKGAFTGEVSASMLKEFGCRWAL
AGHSERRSLHGETDQQVADKASAALAAGLVPVVCVGESLAERQAGQTLAIIERQLAPVLALGREAVAGMVLAYEPVWAIG
TGLSATPEQAQEVHAAIRAALTTLGAAQVQVLYGGSVKAANAATLFAMADIDGALVGGASLVAEEFLRIAAN
>AHV91735.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MRGTRQSRLPSLAAIQAFEAAARLGGFEPAGSELGVTASAIGKRITTLEAQLDTVLFVRGRHGGTLTAAGREYLEQVRSA
LGQLSAATLKARVEPPTELLRVVSTPTFARQVLIPYLPEFTDAHPQVDLEILFSVPYLEISPPNADVWIRFGNGLYPGLQ
VEKLTDDEVFAVCTPEYARRHGPFERPEDLARAALLRCPMEPWRPWFDRAGLDWPEPSKGVWLVDLGMVLAAAHAGQGVA
LSRKTLAAEWLNEGKLMRLFDVRSRGNLQYYLCYEQRRPLQNGARAFAARIATVCARIARL
>AHV91736.1 peptide chain release factor 3 [Bordetella holmesii ATCC 51541]
MNIPQEVARRRTFAIVSHPDAGKTTLTEKLLLFAGAIQIAGSVKARKASRHASSDWMEIEKQRGISVASSVMQMEYRDCV
INLLDTPGHQDFSEDTYRVLTAVDAALMVIDAANGVEPQTIRLLQVCRARNTPIITFINKMDREVREPLELLSEIEGHLG
MDAVPFSWPVGMGKAFGGVFDIRRDRMRLFRAGQERRNDDDEFIEGLNNPEISQRFGQAFEQASGEIELINEAAPAFDHA
AFLAGKQTPVFFGSAINNFGVQEVLDALVELAPKPGARQALEREVKPEEPKFTGVVFKVQANMDPAHRDRVAFVRVSSGR
FERGMRLKVVRTNKEMRPNNVVSFLSQRRELLDEAYAGDVIGIPNHGVLQLGDVLTEGEALHFTGLPFFAPELFQAVEVK
DPLRTKQLRIGLTQLGEEGAIQVFRPEVAGGALLLGAVGQLQFEVVAHRLKTEYGVDARMLPSRYTMARWITSDNPKALR
KFMDANAAHIAYDVVDAAAFLIGSSAQLRVAEELYPDVKFHAMREHGGKVFGDKA
>AHV91737.1 protein-export chaperone SecB [Bordetella holmesii ATCC 51541]
MADQDQDTQQAGSEGPAFNLQRVYLKDLSLEMPNAPHIFLEQEGPAVEVSINVGGQRLAETVFESTVTVTVTTRVNDKVL
YLVEGTQAGIFELSNIPPEQMDPILGIVCPTMLYPYLRANVADAITRSSLPALHLTEVNFQALYEQRLAEMAQQQEGQVN
GAESGIILPPSATRQ
>AHV91738.1 glycine zipper 2TM domain protein [Bordetella holmesii ATCC 51541]
MLYNGRRVLQENIMSAKIPIGSRRIHPLLAAAAIAIIVLCSVGVAAILGWLPGSPAQDGVPQPSAAMRAEQAAVSGPEAA
NLAPAAACPSCGVVAALRQVQVPKRDNSNHIIGTVAGGVVGGVVGNQFGGGHGKDALTVLGAVGGALAGREVERNIRQQD
TVTQYELTVRMADGSKRLFHSAQPFTYGQGDAVRVENNQLLPR
>AHV91739.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MQSLRRKWQSLPRGVVVLLTTLAIYVPLSFIIVQSFLSAPFFSPGKHFSLGAFHFIFDDPAFYKALKSGFILAFGLAAIA
IPLGGMLAFLMVRTDLPGRRWIEPLILVPVFVSPMVLGFGYVVAAGPVGFFSLWVQQILGVVPWNIYSLTSIVIIAGLTH
VPHAYLYISSALRSMGSDVEEAARVCGASPLRVMTSVSLPMVRPAMLYATVLLFFLGLEVFGLVLVLGDPEGNLVLATYL
YKLTNKLGIPSYHLMAAVAVVLIAMTIPLVMLQRRLMRTANRFVTMKGKASRARALPLGRWRWLAGGVVAVWLLVTIIVP
LIGVLLRAFVSNWGMGVSLLDVLSLDAFRTVFSQSNLIRAIINSVAVGVLGGALAVFCYLFIGLAMHRKPDNVTRFLDYS
VLVPRAVPGLLAGLAFLWVFLFVPMWLDNALEDGWLSALPFAEWLRDNFIEWLRAMRSTIFSVWLAYTVVWMAYGLRLIS
STLLQVGPELEEAARSTGASRAQVTRHVTVPLAKYGLIGSWPLMFLVFEREYSTGVYLLSPGTETIGSMLVSLWASGAID
IVAALSFINIVLVVFGLGVALRFGVKLHD
>AHV91740.1 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Bordetella holmesii ATCC 51541]
MKLRSKILLLAVVPLLVAVSAIALGITMQTLELARHQKDVLRAAWIDTKEAELRHYVRLAYSAISPLLAAPDTPQTRAQA
LQTLSNMEFDRDGYFFVYGLDGVSLMHPRQPELVGRNLWDMRDREGTLVIQELLAAAHAGGPAGSPIRYLWEKPSAHDTV
RKLGYVMEVQPWGWMLGTGIYIDDVQHTLGQVDAAVQSSISEMIGWVGGISAFCLIFVAVCGLALNISDQRQSDAKLRLL
ARQVVRSQEDERARLSRELHDGLSQLLVSIKLQLEAARTRLKRNPADAPQIFDPLLEGALGRLNGAVGEVRRISHNLRPT
LLDDLSLPAALEHLTRESWETPQGAVRAHLHIEGAPQPMPENQTTALFRLAQEALANTLRHAQANRIDIRLRYAVDKTEL
IIHDNGRGFDLHAVRDDPRDGIGLHNMTERMATLGGELHIQSGRQGTTLHATLPRTANKETFA
>AHV91741.1 putative exported protein [Bordetella holmesii ATCC 51541]
MKRFFWHLCLYLGLILVFILQAQPTTGSGWPIKVEFQYQQF
>AHV91742.1 radical SAM superfamily protein [Bordetella holmesii ATCC 51541]
MTYSAKEIFKTLQGEGAQAGRAAVFCRFSGCNLWSGRERDRATAACTFCDTDFVGTDGEGGGKFRDAAALAATLADTWGP
ETAGRYVVFTGGEPLLQLDAALIAAVHAQGFTIAIETNGTLPVPAGVDWICVSPKGKAPVVQTRGQELKLVFPQADTPPE
AFANLDFEHFFLQPMDGPQRLANTEAAVTYCMAHPQWRLSVQTHKYIGIP
>AHV91743.1 putative arginyl-tRNA--transferase domain protein [Bordetella holmesii ATCC 51541]
MHELGVGSGVDQVSRGGDLRACLMARQIAARVRRGRVEL
>AHV91744.1 isocitrate dehydrogenase, NADP-dependent [Bordetella holmesii ATCC 51541]
MSNTPKIIYTFTDEAPALATRSLLPIIQTFAKPAGITVETRDISLAGRILAVFPETLTQAQRVGDALAELGALALTPEAN
IIKLPNISASMPQLKAAIKELQAQGYKLPEYPDEPKTDAERDVKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHP
HKMGAWSADSKSHVASMESGDFYGSEKSVTLAAAGNVSIELTCADGKKTVLKDKVAVKAGEVIDAAVLSTGKLRSFLQAQ
IDEAKQQGVLFSVHLKATMMKVSDPVIFGHVVSVFYKDVLAKHADALKLAGFDPNNGIGDLYAKLANLPAEQQAAIKADI
DALYQVQPALAMVNSDKGITNLHVPSDVIVDASMPAMIRDSGKMWNAAGQLQDTKAVIPDRSYAGVYQAVIEDCKRNGAF
DPVTMGSVPNVGLMAQAAEEYGSHNKTFIIPATGVVRVLDASGAVLLEQSVETGDIWRMCQTKDAAVQDWVKLAVTRARA
SDTPAVFWLDANRAHDAQLIAKVERYLKDHDTSGLDLRILSPVEATKVSLERIRAGKDTISVTGNVLRDYLTDLFPIMEL
GTSAKMLSIVPLMAGGALFETGAGGSAPKHVQQFLEEGFLRWDSLGEFMALAESLDHLGSTYNNARARVLAKTLDQATGK
FLDTNKSPERKVGGLDNRGSHYYLGMYWAQAVAEQTDDKELAALFAPAAAALAANESKILDELKAAQGKAVDIGGYYQPD
ADKTSKAMRPSTTLNSILATIA
>AHV91745.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MDLDLQTVSKRYASHQAEGGALQVLDGIDLHIPSGEFLSIVGTSGCGKSTLLRLILGLDSHYEGQIALGGAPVQGTGPER
GIVFQDHRLFPWLTVAQNIAVGLRNASISEADKRDRVAEHVALVGLEGFERSYPHQISGGMAQRVAIARGLVNRPRVLLL
DEPFGALDALTRARLQTELQRIWQKERITMILVTHDVEEAVFLGDRVVVMQPRPGRIRCIVPVPLAHPRNRSDPRFIQIR
DDVLSDFLGPVATQTPLPERAPAHPSLASLRMAW
>AHV91746.1 putative aspartate carbamoyltransferase [Bordetella holmesii ATCC 51541]
MADLRVIRQAKGGFTELRVAFVGDFAHSGRARSLAHALTTLGAPELRAAGPRALLPDGLPQLGLRACASLAEALDGADVV
VDLGLTEAALSVLPSAADYARRWAVGPLADGVLRVGAIDRHALDMASRAVLSHLMAGMA
>AHV91747.1 50S ribosome-binding GTPase family protein [Bordetella holmesii ATCC 51541]
MTESLRIAVVGHSNTGKTSLLRTLTRDADFGEVNDAAGTTRHVQSARLRGHAGIEWFDTPGMEDSVALLEYLDHIAPLAQ
RMDGPTRIRRFLDSPEAHGRYEQEARVLNKLLDCDAGLYVIDARDPVLGKHRDELALLAACARPLLPVLNFVHAPGHRAD
QWRQAMSRLGLHAVLEYDTVAPPLDGEQQLYARLAVLLDRQASMLADLSSALGRERTARRQAAYRLAAELLIDAAALHLP
SPPQALVQTLERLRDTIRDREQACVNALLKLYNFHRQDYRSDALPLENGRFGMDLFHPQALKDMGVQLGVGAAAGAMAGA
AVDLLSAGLSLGTGMLIGAAAGGLWQGVGRLGKRVSGKLRGYSEVSVDDGVLRLLALRQQQLIEALERRDHAAREPIVLS
QAAQWQSGPLPAPLKEARSRPEWSALANGYVDDDRRKQQIAALADMLAHTLP
>AHV91748.1 hypothetical protein D560_3160 [Bordetella holmesii ATCC 51541]
MQGKFVIGVWCPHGYPAHIHIGRFNQGEVAEPNLRLRIPDGVFQSISDDMERLCRRALGQAIEDRLLVDADGGYQETRFR
IDALPWSGPLTALSA
>AHV91749.1 hypothetical protein D560_3323 [Bordetella holmesii ATCC 51541]
MAMATLATVGAHWGWARSFLGDTLAVIWIYYLFKTFLGAHVLTLAGLAFGMGVFIEMAQYAATYLGWSLPNPVLRIVLGS
TADWWDILAYALGWIAVVVIELPRQLPLRRSESPAA
>AHV91750.1 hypothetical protein D560_1266 [Bordetella holmesii ATCC 51541]
MTTNDPSAQDIAHFLQEHPAFFDEHPTVFANLHVPNPHGGRAISLAERQILTLRERNRSLEWRLNELVRNAGDNETIAQQ
VTAWSARLLRETDAARLPAEITLGLAEQFNLDHAGLRLWNLPGLPAEGQHGYGAAVSDDARTFADSLKTPYCGNDTGFEA
VRWLDSTPKSLALVALRLQADAPSVGLLILGSDDAARFTPEMGTAFLETIGQLASAALHRLA
>AHV91751.1 hypothetical protein D560_2565 [Bordetella holmesii ATCC 51541]
MYKRGRICCGFGHARIVPAQAGGTVRAAYPCAGWRFVKTSGRRDMGQSTTSLR
>AHV91752.1 transposase family protein [Bordetella holmesii ATCC 51541]
MAQCSQPETSIAGVALSHGVNANLVHKWIRQAERQAPVAPAFVPVALPAVPSSGRHIEIRLSRGPAQATVQWPVSEAGAC
VAWLREWLR
>AHV91753.1 protein TolR [Bordetella holmesii ATCC 51541]
MPSVRSSGRGGRRMKADINVVPYIDVMLVLLVIFMVTAPLITPGLIQLPSVGAAADVPAKPLEVQISQDGQIALRMREPG
AELQDIARTALVSEVRSRITAETPVVIAADGKVPYETVVKVMDELRSNGVTRLGLLVDQGGSSQPPSTPAKKR
>AHV91754.1 transmembrane sensor domain protein [Bordetella holmesii ATCC 51541]
MLVARLADHRRGVIHLDPELADTRVSGVFPLFDAERALKAVAHSVPIAVQRRGPFWLSVGQA
>AHV91755.1 peroxiredoxin, OsmC subfamily protein [Bordetella holmesii ATCC 51541]
MKKTASAVWQGDLKNGKGSISTQSGALKSQPYGFKTRFEDEPGTNPEELIGAAHAGCFSMALSNVLGEAGLTAERIDTSA
EVTLDKTDDGFAITAIHLIVVASIPNASDAAFQEAAAKAKAGCPVSKVLNAKITMQASLA
>AHV91756.1 tyrosine--tRNA ligase [Bordetella holmesii ATCC 51541]
MPQAEFPITPEVEADLRVARRGCDELLVESEFARKLARSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNV
IFLIGDFTSTIGDPSGRNSTRPPLTREQIEHNAKTYYAQASLVLDPARTEIRYNSEWCDPLGARGMIQLASRYTVARMME
REDFTRRFKSGVPIAVHEFLYPLMQGYDSVALKADLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGMDGVEKMS
KSKGNYIGISESPDSMFGKLMSISDTLMWRYFDLLSFRSLEDIAALKAEVEGGRNPRDAKVALAQEIIARFHSQQDAQQA
LANFEARFRDGAIPDDIPEVQLAGAPMGVLRILREAGLCASSSEAQRAVEQGGVKVDGVKIEDRSLQLEPGSYVLQVGKR
KFARVNLVA
>AHV91757.1 hypothetical protein D560_1253 [Bordetella holmesii ATCC 51541]
MSSSPVYLKTIAALATSLVASIASAEGADQSCGAGACGKKETSQPKGDTGSKDKNGQHTAGSSTSSTAEQPDAGCGKKDA
SCAKH
>AHV91758.1 polysaccharide deacetylase family protein [Bordetella holmesii ATCC 51541]
MKNAPNVPVLMYHHITPAGGMIAATPEVFEAQIAALARAGYQSLSADQFAAYLAGAAVPEKSVLITFDDGYLNNWVHAHP
ILAKHGMRAVIFLITGLIGDGPARACSGQGLPLPADVDHDASKRLIAEGRADEVMLRWSEVQAMRQAGTFEFHSHTHTHT
RWDKVCGADLSANRQHIAQELADSRATLIQRLGNVSDHLCWPQGYFDVDYVQAAHAAGFRHLYTTDPLGQNRPGSNPAHI
YRFAVRNRAGTWLTRRIWQSRGPVIGPLFHAWKGFKKRLRRRA
>AHV91759.1 iron dependent repressor, N-terminal DNA binding domain protein [Bordetella holmesii ATCC 51541]
MSAGAAGIRSRADSVYDTLKQDILDYRLAPGDRFTETELAERLMVSRTPVREALFRLQREGYLEVRHRNGWLVRPLDFET
LDHFYDLRLVLEQAAVEGLCRLPGVKNTLQALVDIWLVAGPHRDAAQVASLDEQFHLELVRAAGNPEIARIHREATERIR
IVRHLDFTLAERVEKTCEEHAAILQAVLAADAARAMSLLRTHIAASQAEVRKITLHRLYSRRGAPAA
>AHV91760.1 methyl-accepting chemotaxis (MCP) signaling domain protein [Bordetella holmesii ATCC 51541]
MPAFGIVAAVLGVIKALAAVDQPPAVLGVLSLRVSNGTLEDVRQTQPLVDSASRLATAAKDTVDGLGRVGVAHYGEIVRS
IGQPVLPQPGLSPEAAGLLDRAKAALNRAQAEAEHFRGLPRPDSARDSLQAVEATYLALVSQVLDPMIVALGKGDMATYQ
GLLGTRLDASEAAFVQAIAGFDFWRAGEFLSAYDAGRQRYRLVLMAVAAGGALAALLIVMTYLFLRRRVLQPLRAAGSHF
DRIAGGDLTARVEVRSGNEIGQLFGSLKRMQESLTRTVSSVRRGVEEINVGAREISAGNTDLSSRTEEQAASLEQTAASM
EELASTVRQNADNARQANQLAASASDVAQRGGSAVSEVVQTMQGISASSRKISEIVSVIDGIAFQTNILALNAAVEAARA
GEQGKGFAVVAGEVRSLAQRSAQAAKEIKGLIEDSVGKVSAGSQQVERAGATMQEIVASVRRVTDIMGEISAASQEQSSG
IEQVNRAVTQMDEVTQ
>AHV91761.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MLEQQFVNALSLGSVYALFALGFTLVFGVLGVINLAHGAVFMVGAYAALTVVQLFALPLWLALVVAFFVAGVTGVLIDFL
VLKPLRKRNAPHLIPMIATIGVGIILNNAAQGIFGAGNMRFPHGTVPEEVIEIAGLHLTVIELGIIFLSFALMAVLMFVM
RRTQFGRALRAIAESPKAAWLLGINVEKLFITTSFAAAALGGVAGVLIGLYSNALFPLMGQPMLHKGIAVIILGGMGDIR
GAMLGGLFLGFAEVLSVAYIGSTMRDAVAFGLLFLILLVRPQGLFGKVVQRKA
>AHV91762.1 isoprenylcysteine carboxyl methyltransferase family protein [Bordetella holmesii ATCC 51541]
MLLIAAALLAYALRWRASGWGALVWLACFVAMFAIRTPHSIRNRANVIVGARKGLDERLLLSGMFITMMVLPLLQLATGA
FGFADYRLPSWATWTGALLQLPCLWLFWRSHADLGRNWSPGLEVRQEHQLITAGVYRRIRHPMYAAIWIAALTQPLLIHN
WIAGALVIPAFAAMWLIRVPSEEAMMRAEFGSAYDDYCLRAGRLLPR
>AHV91763.1 muconolactone delta-isomerase [Bordetella holmesii ATCC 51541]
MLYMVEMQVNLPVDMPTDKADKLKADEKALAQKLQHEGKWQHLWRVADRYANVSIFDVASHDELHQLLSSLPLFPYMDVR
VTALARHPSAI
>AHV91764.1 glutathione S-transferase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSALDVFPVTRKWPALHPDRIQLYSLPTPNGVKVSIMLEETGLPYEAHRVSFYAQDQFSPEFLSLSPNNKIPAILDPHGP
DGKPLALFEFGAILVYLASKTGRFLPAEAVGRFETLQWLMFQMGGIGPMFGQLGFFHKFAGKAYEDKRPLDRYVAESSRL
LSVLDGRLQDRQWVMGEQYTIADIAIFPWVRNLVGFYGAGELVQFERFANVKRVLEAFVDRAAVQRGLLIPAA
>AHV91765.1 entericidin EcnA/B family protein [Bordetella holmesii ATCC 51541]
MRSKIVLTAFVAFGFVLQGCNTVAGMGKDMSRAGNAITHAAEK
>AHV91766.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV91767.1 hypothetical protein D560_0592 [Bordetella holmesii ATCC 51541]
MVDFLMPRDAEIVKNNPPLISDFAVQRADGTDLAMRFYQLVAVAGPMPNGGSNRVEIAVCSIPALLAMKGHALAGRYKQK
DAYDIYYCVRNYPDGIEALAQQCLPLLGHASGERGFQHIADKFDAFEGHGPTCVRRFVEDTHALGDRTPEQWQRDAFGQI
DALLRAMALRG
>AHV91768.1 putative 3-isopropylmalate dehydrogenase [Bordetella holmesii ATCC 51541]
MILSGAMLLNWHGQKTGKPEFSQAAAAIEQTIANTISAGQCTRDVGARWVRVKRAQRSFPRCRRRDDVSRAAFACLRLPC
PCGGAAG
>AHV91769.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91770.1 bolA superfamily transcriptional regulator [Bordetella holmesii ATCC 51541]
MLPTPEQVRQYIVDGLPCEHIDVQGDGSHFDAVIVSPAFEGKRLIARHQLVYAALGDRMKAEIHALSMRTLTPEEFKKAG
S
>AHV91771.1 protein-export membrane protein SecD [Bordetella holmesii ATCC 51541]
MARVEQLLADAKLPATSVYYEQNGTLGTIRARFSSTDIQLQARDLLDRSLNTVAADPHYTVALNLLPASPPWMRTLGWFE
PKPMYLGLDLRGGVHFLLQVDMQGALTARYDSLATDVRTILRDQKVEVGTVERAGQAILASFANADARDRGRDVLRSRMA
DLQFNERDEGGRFLLEGALSAQAVTRVQESALKQNINTLHNRINELGVAEPVIQQQGTDRIIVQLPGVQDVAKAKELLGR
TATLELRMVDDTPASQSALANGTVPFGLERYADRDARPILVRRQVILTGENLQDAQPGRDHQTQQPSVNLTLDSKGARIF
RDVTRDNVGKRIAILLFENGKGEVVTAPVIRSEIAGGQVQISGSMSAEEAADTALLLRAGSLAAPMSIIEERTIGPSLGA
DNIAKGFYSTLYGFIAIAIFIIVYYHLFGVFSTIGLVFNVLLLLALLSMLQATLTLPGIAAIALALGMAIDSNVLINERI
REELRAGATPQQAIYHGFERAWGTILDSNLTTLIVGLALLAFGSGPIRGFAVVHCLGILTSMFSSVVGVRALANLWYGRR
KKLGSISIGTVWKPGTK
>AHV91772.1 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein [Bordetella holmesii ATCC 51541]
MRRLVVGITGATGALYAVRMLQVLRGVEDVETHLVVSASGVLNIQHELDIGRHEVQALADHSHGVRDVGATLASGAFATA
GMVIVPCSMRTLAAVAHGLSDNLITRAADVTLKERRRLVMMVRETPFNLAHLRNMTAVTEMGGIIFPPLPAFYHRPASTE
EMIDHTVARVLDLFDIKVPGPSWDGTRA
>AHV91773.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MKTYLGLGTGPGVGYETAAEFARQGFDVVLVARRADTVNPLAQRINAAGYRAQARTVDVTDIDSVASLIRDIEQERGGID
VLHYNVASLRQASIEQLRREDISSDLLANVGGAVAAVQAAAGQMLARRQGAVLITGGGLGLYPHPDYLTLSIGKAAIRAL
ALALFEPFKAQGVHVATVTIAKFIDANSPDTKAVASLFWQMYQQPQEAWTAETVYGT
>AHV91774.1 GTP-binding protein Era [Bordetella holmesii ATCC 51541]
MSSQAFRTGFVAIVGRPNVGKSTLTNALIGSKISIVSRKAQTTRHRIHGVLTREHEQFVFVDTPGFQTRHGGAMNRMMNR
VVTQALADVDVVVHVVEAGKWSEGDAKLLPLLPKAERTILAISKIDALKNRDDLFPFVAKIMAQHPYGAVVPVSATKNQQ
LDQLLAEIAQRLPEGEAMFEEDTLTDRSMRFIAAELVREKIFRLVGDELPYGCTVVIEQWEESDAHARIAACVVVERDSH
RPILLGSGGQHMKRIATEARQDIAKLLDKPVHLEVYIKVRKGWSDREGALRDLGYE
>AHV91775.1 hypothetical protein D560_1213 [Bordetella holmesii ATCC 51541]
MAFALYDRSRNRVLHGYVAFDAHALFAFEHAKPGCGKV
>AHV91776.1 ftsX-like permease family protein [Bordetella holmesii ATCC 51541]
MLRRDARAGELRLLALAIVVAVAAVTSVGFLADRVARALERDAAQILGADLVLEVDAPLEAEVMDQASRLGLTVAQTLQF
PSMAMAGDSAQLVSVKAVDPGYPLRGRLRVAPAPFEADAPASGVPAPGTVWADAQLLALLDLKVGDSLKLGEASFTVARV
LTYEPDRGMQFVNVAPRVMMGRGDLAATGLVAAGSRIGYALLAAGPPQAIAQFQSWIGQHLQRGQRLATLESGRPEMRRT
LDRAQRFLSLVALLAVVISAVALALAAGRFMARHRDGVAVMRCLGASQALVTRTLWVEFAVLGGLASAAGCLAGYGVHGL
LVSALAGLIETQLPAARSLPAVQGVLTGVLLLLGFALPALARLRHVPPARVLLREETRLPTRGALPYGLGAVGLALLIWW
VAGDLRLAAVVAGGFLAAFAVFAAVGALCVQALAGLRSRLNGLPALRFALAGVVRRRVSTITQICALAIGLMALLLLAMT
RADLVDGWRRTIPPDAPNRFLINIQPDQRLAVQDRLLGQGLNQARLWPMVRGRLIAVNDRPVGPDDYDEPRAKRLVDREF
NLSYAEAAPEGNRMQAGRWIDPAENEVSLEAGLAKSLGLAVGDKLDFDIAGQTVKVVVAGTRQVDWDTMRVNFFAILSPA
ALADMPQSWITYFYLPREKAGLLRDLVHEFPNLTVFDVGAILTQLQTVLTEVVKAVQLLFMFSLVAGLLVLATALSATRD
ERVREAAVLRALGATRAQLLRAQRLELLAVGGWPDCWQPPAPRQWPGCCPPRCLISPYP
>AHV91777.1 N-terminal TM domain of oligopeptide transport permease C family protein [Bordetella holmesii ATCC 51541]
MTQTLAPALKRESPWRRNAAEFFASRTAVFGLVVTVLLFLAAALVTCSP
>AHV91778.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHN
>AHV91779.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MFEALSAGLFNGLIYAAVAVGLALIWGITDVINFAHGEFLMLGMYSAYWMYTLGHLDPTLSAPLVAIVLAFVGFLTYALI
IKRLQKGPAMAVILATFGLGLVLRQLAFIAFSPDYRSLPDTLISGSVSLAGVSLGRPQVVTGLVALAMVVALFFLVYRTC
WGHALQAVAEDRDVAALVGISPDRVNAQVWMLGSAAVGLAGALLTTFFYVFPSVGTVFGLLAFVAVCMGGFGSLPGAFIA
GILIGIIEAMTGYFVAPVLKTVSVFILFILVLWYRPRGLFGRW
>AHV91780.1 queuosine biosynthesis family protein [Bordetella holmesii ATCC 51541]
MIAVGTTSVRALESAAAQSADGELRAAQGDTRLFITPGSRFRVVDALVTNFHLPQSTLLMLVSALAGIEPIRRAYAHAVA
GRYRFFSYGDAMFIESAQP
>AHV91781.1 CRS1 / YhbY domain protein [Bordetella holmesii ATCC 51541]
MPILELTSRERGDLRSAAHPLKPVVLIGDAGLTDAVLKEIDRALNSHELIKVRAGGEDRDTREAMLASICDTLSCAPVHH
LGKLFILFRPSADTPAEAAEASGKRRASEPHTPKKLAAEGKTLGKTRSRKPAEGETPKTAAPRSVPLNEKGRPMRPSTRK
PQEAAGHGIPRRSGSALSLRDGARTGTSARGGLQRARVIKSK
>AHV91782.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91783.1 putative methylase [Bordetella holmesii ATCC 51541]
MLRAFLQGLPAHLLPGGEGWLILSDLAEHLGLRGPDDLQNWIAQAGLRVLQRHTARPAHPRALDASDPLHMARSRELTSL
WRLGCA
>AHV91784.1 toxin YhaV [Bordetella holmesii ATCC 51541]
MSTGKPEPLVIHGWTVFAHSLFLAQIEALAQLVEALKQQDPVGYVKKNASKRLAAITKLAFDVVPQDPARPEYRQGGTLG
HDHKHWFRAKFFQQYRLFFRYHAPSMVIVFAWVNDEGTKRAYESSDDAYRVFRKMLESGRPSDDWNQLLTEARAEAQRLQ
QFAAGVTS
>AHV91785.1 dihydroxy-acid dehydratase [Bordetella holmesii ATCC 51541]
MAGARALWRATGMKDGDFGKPIIAVVNSFTQFVPGHVHLKDLGALVAGQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSL
PSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPVVFVSGGPMEAGKVTSPTDGKIIKLDLVDAMIKAA
DPNVSDAEAEQVERSACPTCGSCSGMFTANSMNCLTEAIGLALPGNGTIVATHAWRRGLFEQAGRLVVDLCRRYYEQEDS
SVLPRSIATKAAFENAMALDVAMGGSTNTVLHLLAAAQEAGVDFTMADIDRISRKVPCLCKAAPATDKYHIEDVHRAGGI
LGILGELGRADLLDLSCGNVHSGTLGNAIAQWDVAGGAGDAARKFYRAAPGGVPTTVAFSQEKTFLTLDVDRQAGCIRSK
EHAYSKDGGLAVLYGNLAEKGCIVKTAGVDESQWVFTGRARVYESQEDAVEGILGDKVVDGDVVIIRYEGPKGGPGMQEM
LYPTSYLKSKGLGKTCALFTDGRFSGGSSGLVIGHASPEAAEGGTIGLVEDGDIIEIDIPQRRMHLAVEDAELARRRAVM
EARGEQAWKPVDRERVVSLALQAYAALATSADRGAVRDLSQLKR
>AHV91786.1 sulfate ABC transporter, permease protein CysW [Bordetella holmesii ATCC 51541]
MTEPRWVRGILLFLGLAFLTLFLFVPLAAVFTEAFRKGWQTYLAAITEPDALSAISLTLWVAAISLPLNLVFGVAAAWAI
TKFQFRGKQFLITLIDLPFSVSPVVAGLIFVLLFGSQGWFGPWLQDHDLKIVYAVPGVILATLFVTFPFVARELIPLMQA
QGSEEEQAALTLGATGWQIFWRITLPNIKWGLLYGAILANARAMGEFGAVSVVSGQVRGLTNTMTLHVEILYNEYQFSAA
FAVASLLALLALVTLVAKNFIEWRNQRLLAQGEQPLEASPLAVQQPQAV
>AHV91787.1 protein-export membrane protein SecF [Bordetella holmesii ATCC 51541]
MEFFRIQRTIPFMRHALVLNIISLLTFIAAVFFIITRGFHLSIEFTGGTVMEVSYAQTAQLDQVRGVVGKLGYSDFQVQN
FGTSRDVMIRLPVAHGQTSATQSETVMGALKAADPSVELRRVEFVGPQVGQELLHNGLMALLVVVLGIMVYLGFRFEWKF
ALAGVIANLHDVVIILGFFAFFQWEFSLSVLAGVLAVLGYSVNESVVIMDRIRENFRKYRKADVQEVINSAITQTISRTI
ITHGSTQMMVLAMLFFGGPTLHYFALALTIGIWFGIYSSVFVAAALAMWLGVKREDLVKPAKKAEDGVETP
>AHV91788.1 cysteine dioxygenase type I family protein [Bordetella holmesii ATCC 51541]
MLQGQLNERHFRWDARSGLAQPAGGKRRRPGEIVTAMPGLQQIHQLGNADPQTAISLHIYGVPQADIATGVNITVPPAAT
QPDTEAAISSPD
>AHV91789.1 MMPL family protein [Bordetella holmesii ATCC 51541]
MSPSRLFILRPVATTLSMVAILIAGLIAYRLLPVSALPEVDYPTIQVVTLYPGASPDVMTSLVTSPLERQFGQMPGLNQM
SSTSSGGASVITLQFSLSLPLDVAEQQVQAAINAASNLLPSDLPVPPVYNKVNPADAAVLTLAISSPTMPLPQVRDLVDT
RMAQKLSQVPGVGLVSVAGGQRPAVRVQVNPQALAAAGMSLSDLRTAVVGANVNQPKGNLDGPLRSTTIDANDQLKSPTD
YNDLIIAYKNGAPMRLSDVAQAVQAAEDTRQAAWAGDRPAILLNVQRQPGANVIEVVDRIREMLPQLRAALPATLDMQVV
SDRTQTIRDSVKDVQHEMLMAIALVVMVTFVFLRSATATFIPSVVVPLSLVGTFGIMYLAGFSINNLTLMALTIATGFVV
DDAIVMIENIARHIEEGESPMQAALKGASQIGFTLISLTFSLIAVLIPLLFMQEVVGRLFREFAVTLAVAILISLVVSLS
LTPMMCARLLKPESAQHYGRFHQWTGRLIDRIIASYDRMLTVVLRHQTATLLVALATFALTVLLYIVIPKGFFPQQDTGL
IQGITQAPQSISFAAMSQRQQQIADRIAQDPDVAAVSSFIGVDGSNATVNAGRMQIALKTQAERGADQKSIMQRLQHAVN
SMNNGVTLYLQPVQDLTIEDRVARTQYQLTLSNPDLAQLSEWAPKLVDRLSTLPELADVSHDLQDQGLMTWVDIDRDAAS
RLGITASAIDEVLYDAFGQRLISTIFTQSNQYLVVLEVLPQFRRDASALDQIHVPTSSGGQVPLSSVARISEGHTVLAIN
RLDQFPMVTVSFNLAPGASLSSAVEAIKTAERDIGMPTAIETRFQGAALAFQNSLTSTLWLILAAIVTMYIVLGVLYESY
IHPITILSTLPSAGVGALLALMISGTELDMIGIIGIILLIGIVKKNAIMMIDFALEAERKQGLPARQAIHQAALLRFRPI
LMTTLAALFGALPLMLSNGTGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLMFDRLSRPRGAHTQARAQP
>AHV91790.1 hypothetical protein D560_3060 [Bordetella holmesii ATCC 51541]
MSTLSPQPAETLRQAADRLAQARRAHEHGERGIALLMQSRENFINSLRHTGLDYAQARIKFDICLEQQYELHKRIERELE
YAQRVYETCVNGERVASNA
>AHV91791.1 flagellar export protein FliJ [Bordetella holmesii ATCC 51541]
MPSQLPLDMLISLAKDSTDEAARELGRLNAARSNAERQLTMLHDYRQDYLKRLQDAMVAGMPAADCHNYQRFIGTLDDAI
GQQTNVLQKADMQLLQGRLDWQREKRKLSSFDTLAERDARSRAMTEARREQRANDEISARLVRRQAGM
>AHV91792.1 glycosyl transferase 4 family protein [Bordetella holmesii ATCC 51541]
MLAGTLAGLLVLGPSNMTLTWLWPALFVAAMPVFVAGLLEDITKDIGASKRLFAAFASAAIAWWLLGGVSRVGIAPVDWV
LSFWPVSLLFTVFAVGGCTHALNIVDGMNGLAGMIATLMAVSISLVALQVGDMPIFMISAALASATLGFLVWNFPFGRVF
LGDGGAYFLGFMLAELAVLLVVRNPSVSPFYALAVLFYPVFETGFSIWRRRFKRGVPVDQPDALHLHQLVFRRLVRVTFS
RRSWHAVPALCNALASPYMWVLALIGLVPATIWWDNAWALCASLVVFALVYTWFYMRLVSWRRPGWLLLPSVLRTD
>AHV91793.1 RIP metalloprotease RseP [Bordetella holmesii ATCC 51541]
MIFTLLAFVVALGILITFHELGHYWVARLCGVRVLRFSVGFGRVLLRRRDRNGTEWAVSAIPLGGYVKMQDDPPPGASAQ
QVAESFNTQPVGRRFAIVAAGPVFNLILAVVLYAGLSMVGTQVPAPILGQPAAGTAAAMAGVAAGDRIEAVDGRSVESWT
DARWRLFDRLSAGQTVHLDVRAGNGAQRALTLTLPAEQQVDPSEGDPVQISGLRLQAAKPVVRGVMPASAGEAAGLREGI
WC
>AHV91794.1 hypothetical protein D560_2077 [Bordetella holmesii ATCC 51541]
MIGAAKADGHIGPTERQLLEQELARLSGDAADRAWLQAELAGPVDPAAVARAAQGPEMAAQMYLASLLMVDEQSYMERAY
LDELARQLKLAPSLQRQLETEVVQLS
>AHV91795.1 DNA polymerase III, alpha subunit [Bordetella holmesii ATCC 51541]
MSEAATNPPPFVHLRVHSEFSVVDGIVRISDLIKRVARMGQPAVALTDLSNIFGLIKFYKNARGAGIKPIAGCDVWLSND
EDRDKPFRALLLVRNHQGYLNLCELLSQSFLLNQYKGRAELRREWLQGQEGLIVLSGGRAGDIGHALDAGNTVAALALAR
QWGEMFPGAFYIELQRAGMDGDEAYTQAAMRLAAEAGLPVVATHPVQFLDREEFQAHEARVCIAEGEILADPRRVKRFTP
QQYLQSSQEMQARFADVPSALANTIEIAKRCNLSLVLGKPRLPIFPTPEGVTLDDYLVQLSEEGLEKRLAFLFPEQAERD
RQRDTYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNGVPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPE
RVSMPDFDIDFCQDNRERVIEYVKTKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPADPWSLER
TLKDEPAFKERYEQEEEVRALVDLARPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPGQENSAVSQFDKDDVEAAGLV
KFDFLGLRNLTILDWAVRYVRQFNADKRDFDIMALALDDPAAYKVLCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAM
LALYRPGPLESGMVDDFVNRKHGRAAVDYFHPDLEGTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFQQGAQEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKAYHPAEFLAATLSSDMDDTDKVQI
FCRDAQDNGVEVLPPDVNASGYRFAPVEDEHTAHGRPPRTMRYGLGAVKGTGQGAVEEILRARQEGGPFANLFDFCRRVS
KHAVNRRTIEALIRAGAFDTIESNRAAMLASVGTAMEAAEQAARSVNQASLFGDDSGDVVAGELAKVAPWNLHTRLTEEK
AALGYYFSGHLFDAWRDEVRRIVPMPLARIEPQRDLQWMCGVLAGVRVMMTRRGKMVFAVLDDGTAQVEISVFNELFEKH
RNRLKEDQLLIVQGKVSNDEYSGGMRIVAENLFDLQLAREARARALRITLNGQADAARLRQLLNPFRAEPENGIPGVPVD
VIYRKDNFLCTVRLGQEWRVRMADTLLENLALWAQPDGVEVSY
>AHV91796.1 receptor ligand binding region family protein [Bordetella holmesii ATCC 51541]
MRKHFGLSAVAAALALGLPLLASAQVKVGVTVASTGPAASLGIPERNTVALLPKEVAGQKIEWIVLDDATDTTQAVKNAR
KLASEDKVDVLVGTSVTPGSLAMVDVAAETKVPMISVAASAKIVEPVDEKRRWVFKTPQNDALMASALADAMVKSKVKTL
GFIGFADAYGDGWLAVMEEAAKAKGIKIAGVEKYGRTDTSVTGQVLKLVAAKPDAILIAGAGTPSALPQKELKARNYGGL
IFQTHGSANNDVLRVCGKDCEGMLLPAGPLLVAAQLPDSNPVKKSALDYVKTYEKVHDDGSVNTFGGHMWDAGQLIVAAI
PEAIKSGAKPGTPEFRVAMRDAIENIKNLPASQGVFNMSPTDHAGFDDRSRVMVKVKDGKWTYQPDL
>AHV91797.1 hypothetical protein D560_3552 [Bordetella holmesii ATCC 51541]
MTAPFEGVRPASESSIEIGFVFEGRHCVQRLRLKPTAANLKKAAIRRAEILEAIARGDYRLPAS
>AHV91798.1 putative oxidative stress related two component system, sensor kinase [Bordetella holmesii ATCC 51541]
MAQRVITAVNITRTALIYSHADERSKLLLDLATNEGIQVYPREITDFTEALPDDDYWQRVAQHIRTRFGPDTQIAWSVNQ
VPGFWVSFRIDQDLYWLVFEREQIGLTDGIEWLGWGATALLLSLVGAAVSVGFVNRPLSRLARAAQVLSRGETPAPLPEQ
GPLEIRDLNASFNRMAKDLRQAEADRELMLAGISHDLRTPLARMRLEIEMSGVSEDARQAIDEDLGQIDHSIGQLMEYAR
PAGTLPQLATDISSVLSELYERERSHTGSLGGELEASIEPGLRARITALDLKRIVGNLIENARRYSRSTDGLAHLVMTVQ
SKGNTLTIEVSDRGPGIAAEEVERLLRPFSRGEAARTGVSGAGLGLAIVERLLKHVGGSLRMLPRQGGGLTARIELPKAK
LRNYQLDTPNQ
>AHV91799.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MKFKLRHMEVFRAVMLTGSTSAAARMLFVSQPVVSRTLANIETSLGLPLFERKVGALLPTENARVIFREVDDLYSAAARI
DGLVENLKGHRQERISFSSSPALGLRVVPKAIKHYLATQPPAAFSYKTSLIKEMPADLLGKVVDFALSIWPIDHPNLRCI
PLFDGKICLAVPKGHPLSQRRLIKLEDLTGLPLILYQQEMPIGALIRERLRAAGVEDAPLVEINRSEQACALVHEGVGVA
LINELCVDEELWSGLVARPVDLDFPVAVYLITSAFETLQSGCETFLQMLVRQQVEALNTR
>AHV91800.1 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family [Bordetella holmesii ATCC 51541]
MALHLTIHPDNPQARLLKQAAQCISDGGLVAVPTDSSYAVVARLDDKDAADRLRRLRGLDERHHLTLLCRDLAEIGHFAK
VDNRQYRLLKLATPGPWTFILEATREVPRRVSHPSRKTIGIRVPEHAVALALLEQVGALCCRRRLSPATKKMP
>AHV91801.1 bacterial regulatory, Fis family protein [Bordetella holmesii ATCC 51541]
MSESLLTEGLDVYVWEGSSDIALRTERALAGYDATVIHADASATSLPHDRDAARLAVGGVSVTIMGDGRFSSDWLATQGI
PVVWVAGQERSQDHRFYPPEYSYTLPLAFSGAELRRLLFRVAGIAQRAAVPDGARVQPALVAESPAMRSLLAEATMFADC
RSNALIHGETGVDKERIARLLHEAASWANGPFVAVNCGAIPEGLFEAHFFGHAKGAFTGAVGAHKGYFEQAHGGTLFLDE
IGDLPLYQQVKLLRVLEQSTVTRLGSTTEVPVAFRLVAATNKDLLALVAQGEFRADLYYRLAVIELHIPNLEVRGPAEKR
ALMTAMLKQQGIDEDVPAWVLQRVESLRFPGNVRELSNLAERVAIVRRQLQGWDAERLQRIFDGCGAALKAPPVVMPATA
LSDAERAERERILAALDSNGWRRQDTAHHLGISRKVLWEKMRKLRLGDAQSEAVEGMGEL
>AHV91802.1 ribosomal S9/S16 family protein [Bordetella holmesii ATCC 51541]
MIGNWNYGTGRRKTSVARVFIKKGTGNIVVNGKPVDEFFARETGRMVVRQPLALTGHLESFDIKVNVIGGGETGQAGAVR
HGITRALIDYDATLKPALSQAGFVTRDAREVERKKVGLRKARRRKQFSKR
>AHV91803.1 istB-like ATP binding family protein [Bordetella holmesii ATCC 51541]
MNLQHNRIEQICDVLKLERIGSEWPAMAQQCAREDASHGDFLERLLGIENDARIERQRAALMKIATLPSVKTIEDYDFAF
ASGAPRAQIQELAALSFIERAENVVFLGPSGVGKSHLAQALAYRAVMAGIKTRFLTAADLMMQLATAHKQDRLQQYFNRA
IIGPRLLVIDEIGYLPFGREEANLFFNVVAQRYERTSIIVTSNLPFSQWASCFSEDQTLTAALLDRLLHHAHIVQIAGES
YRLKDKRKAGNIKIRN
>AHV91804.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MQKLHGNNEAGLDELKAFVAVATQGSFAAAARMLDRDSSVLSRRISALERRLGARLVTRTTRAIILTEAGTQYLRRVRTI
LDELDAANLEASDVACTPRGVLRISMPLSFGRRWIAPLFSRFMRAYPAVKLDARYTDRYVDLVSEGFDLAVRVGRMADSS
LVTRRIGTYRTMLAASPGYLQEHGHPQTPTELASHACLGFTGFSSWPRWSLARADSRFTFEPVGPLIADSAEVVVDSAVE
GLGIVLAPDWLIVDHLRSGQLVELLPGWGASNDGPVSIVHPSGHIVAAKSRVFIDMVVENLHNVWHWPPSR
>AHV91805.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MDPLRQLDLNLLVVFQHLLQERNISAVARRLDLSQPAVSNALRRLRAAFGDELFVRTAQGMLPTPLAQGMGGPVGEALSL
LAHLTDAAQPFDPAGSQRRLRIAMSDVGEIHFMPGLMDACARHAPGVRIDSVRLSGADL
>AHV91806.1 ybaK / prolyl-tRNA synthetases associated domain protein [Bordetella holmesii ATCC 51541]
MLLQSMGHDKPVVMLPASGKTSAQAAAGLGCEVAQIAKSIIFRRLSDDAPVLVVASGINRVDEAKVAALVGPLGKADARF
VRATSGYAIGGVCPIGHSTPPVMLLDSDLFRYDSLWAAAGHPNAVFNLTPAQLAAMTGAERADVALRT
>AHV91807.1 glycosyl transferase 2 family protein [Bordetella holmesii ATCC 51541]
MTLSVIIITKNEAANILGCLESVVFADEFIVVDSGSTDNTVELARDFGARVVVTADWPGFGPQKNRALDLATGDWVLSID
ADERVTPELAQAIQAAVRDGQVLAWEMPRLSWFCGRFIRHSGWWPDYVLRLWKRGAARFTDAAVHERAVPADGRSARLGP
HLLHYPYPDFDSLISKINRYSSDAAAMMHARDRRANVFTALGHGFWTFVRIYLIRRGFLDGRHGLVLAATAAAGSFFRYA
KLMLKSEPEPPK
>AHV91808.1 hypothetical protein D560_0593 [Bordetella holmesii ATCC 51541]
MLPTLCEELGLPVPPDDGSKRERMTASFNALADTELPAVARKLLIRQPPNATTRNQIQDILWSDSACPPIPRRYRREIAR
RLNSEDLYGDARRFDELLECLWILNADDWMHLKGGNPTGLRAEIQQHVDRHPEDWPAETLFDQLGAYDASDRRFALFPEG
MASADVRPDEAAQRHFVACVNEPLRGCNVELRETDLEGGYPVFSLLSLHAATRSRPKNLIFASPDKPDLRFRDALDND
>AHV91809.1 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase [Bordetella holmesii ATCC 51541]
MNDLLNTLGVVKRKFDRPDPALVRRLSAHGVATVHEALGRVGLMDPGIRPVYDGARLCGTAVTVLLQPGDNWMLHVAAEQ
LQAGDVVVAACTTDSHDGFFGELLATSFRARGAQGLVIDGGARDISELREMDFPVFSKAVCAKGTVKATLGSVNIPVICA
GALVRPGDVVLADADGVVVIPAAQAAEVADRADERLANEARKRARLAGGELGLDIYSMREPLAQAGLRYLD
>AHV91810.1 ATP synthase F1, gamma subunit [Bordetella holmesii ATCC 51541]
MPGIKEIRTKIKSVQNTRKITKAMEMVAASKMRKAQDRMRAGRPYANKVREIAAHLMQANPEYNHPYLQEREIKAVGVVL
VTTDKGLCGGLNTNISRLALSRLKDFEAQNIKVQSTAFGNKGLGLLTRIGAKLVSQETQLGDKPDLDRLLGAIKVQLDDY
LEGRIDALYVATTRFVNTMKQEPVFLRLLPLASGLDDPFQSGVELLDGTAEVKSDYSWDYIYEPDAKSVIDDLLQRYVEG
LLYQAVAENMASEQSARMVAMKAASDNAKKVIGELQLVYNKTRQAAITKEISEIVGGAAAV
>AHV91811.1 undecaprenyl-diphosphatase UppP [Bordetella holmesii ATCC 51541]
MSDSTLYLLKAFFLGIIEGLTEFIPVSSTGHLILFGDWIQFESGSGKVFEVVIQLGSILAVMWIFRARLWQLVRGTLCGE
RQELLFTRNLLLAFLPAAVIGAIFIKSIKQTFYHPGVVAVTLVLGGLIMLWVEWRAPKTPGDAPGAADDTASDERATARR
LEDISWKQALGVGVAQCLAMIPGTSRSGATIIGGMIAGIQRKTATEFSFFLAMPTMLGAAVYDMYRNMDVLTSHDLSGIA
VGFVAAFLSALVVVRAVLRFVANHTYRGFAWYRIALGIVVAIWLLSK
>AHV91812.1 aldehyde dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSDYPDTLLLIDNEWRQAQGGAFIDVVNPANGQKIGRVASASRQDLDLALAAAQRGFETWRDMSAHERCGIMRKAAALLR
ERADAVARLLTREQGKPLVEARGEVLAAADIIDWFGNEALRVYGRIVPSRNVAAQQLVIKEPVGPVAAFTPWNFPVNQVV
RKLGAALASGCSFLVKAPEETPASPAALLNCFVDAGIPKGVLGLVFGSPAEISSYLIPHPVIRKVTFTGSTPVGKEFAAL
AGRHMKRVTMELGGHAPVIVAEDADVELAVKASGGAKFRNAGQVCISPTRFLVHKSIKAEFERAFVAHAEKLKLGDGLAE
GTTLGPLANDRRLAAMDKIVKNANEKGARVATGGARVGGAGNFFAPTILTDVPLDADIFNEEPFGPIAAIRSFDTLDEAI
AEANRLPFGLAAYGFTRSIKTVHELSRRLEVGMLWVNQPATPSAELPFGGVKDSGYGSEGGPEALEAYLVTKAVSVVGV
>AHV91813.1 NIF3 family protein [Bordetella holmesii ATCC 51541]
MNKVDIRTLTAWLDATLHTARFKDYAPNGLQVEGKSDIAHIITGVTASEALLRAAIERGADAVLVHHGWFWRNEDPRMMG
QKRRRLALTLAHDLNLIGYHLPLDAHPTLGNNVQLARVLGFEPARDEDGVPLTCGKDQLIWLGEAPGVATLGELGARIGQ
RLGRQPLIVGEATQQVGRIAWCTGGAQSMMAEAVDAGATVYITGEASEPNAHLARETGVGFVSAGHHATERYGIQALGQA
VAAQFGIKVEFVDIDNPI
>AHV91814.1 tetratricopeptide repeat family protein [Bordetella holmesii ATCC 51541]
MWRIPAAGLGLALLAACATNNVDRAWQLMQQQQQEQALMQHKNDAADRQRAMASRPAMALSVIREAQQSGRYFASLAYLD
AYRQTYGETPQVQVMRTDALRMTGQADSAEALYRALLNGEEAAQAWHGLGLLAAGRSDFAQAATDLARAASLRPTDAQYL
GDLGYARLRAGDLQGARLPLGQAAELDPSNARILGNLALLLVLQGEEGGAQQIMTRGQLSPAARDRVYQLAAEIRRPAAV
SAVAPAAVATSGPVVRAVASGQPTTVVAAEPVSVLPMVQRPLLDRLGNPPLVQ
>AHV91815.1 rod shape-determining protein RodA [Bordetella holmesii ATCC 51541]
MKRLGLILLRVFTAFDWPLLLVLVLFAALGLTIMHSAVGSTDWRFAEQSRNFIIAFFAMWIMALVPPQTLMKLALPFYVV
GIVLLLGVEFAGETSKGATRWLNLGFTRIQPSEMMKIAVPMMLAWYFQRHEGQVRIRDFLVAALMLVAPFGLIVLQPDLG
TALLVFGAGFFVIYFAGLSFKLLVPAVLAGVVAIGTLVYYEDQLCEPDVDWVVLHDYQKHRVCTLLNPSSDPLGKGFHTI
QSMIAVGSGGLYGKGYMKGTQTHLDFIPERTTDFIFAVYAEEFGLYGGVALLVLYGLLIARGLAIASRCSNQFGRLLAGS
MTMMMFIYVFVNVGMVTGILPVVGVPLPFMSYGGTALLTMGVAFGIMMSISRSKPVKA
>AHV91816.1 putative exported protein [Bordetella holmesii ATCC 51541]
MTLFKKLSATTLLCLSTQVSAQSLPQGVSLGNLEASRDAQTGQTVITGTYGNQSQARIEHASVTFALFDAGGREIGRIST
QSEAALLPGAVWHFRASTPLDVRRFSAISATAQ
>AHV91817.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQVRIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV91818.1 PLD-like domain protein [Bordetella holmesii ATCC 51541]
MTRSRASWLGGRALPSHEGRAPSACLPRPEADDTPLGRAIAPRVARHPGLAGIHALADAYDAFAARMLLARAAQRTLDVQ
YYIWHDDMTGTLLLEALHQAAERGVRVRLLLDDNGTSDLDATLAALAQHPHIEVRLFNPFVVRRPKVIGYLTDFKRLNRR
MHNKSFTADNQVTILGGRNVGDEYFGATDSVLFADLDVLAVGPVVQEVCADFDRYWNSPPAYPVEQILGAAPAGELGRLA
RTARRLEGDPKADAYIKVLSQTPLVHQLLQGELPLEWSPASMVSDDPAKTLGQARPEALLTYQLKTVIGEPQAHVDLVSP
YFVPTTQGTEAFCALARRGVQVRVLTNALEATDVSAVHSGYARRRKDLLASGVQLFEMRRTGGAMQRNRSLGPFGSSGSS
LHAKTFAIDGHSVFVGSFNFDPRSAHLNTELGVVIESPALAQSICQSFDTQIPAGAYHVRLDERGRLYWLEPTTGGTFIR
HDREPGASLWQRFAVWILSLLPLESQL
>AHV91819.1 tadE-like family protein [Bordetella holmesii ATCC 51541]
MFFLVVYGILTWGLIFVAQQSVNYAAEEGARTALKWQGADAMALRAQQARTEAVRQLSWVQAMGRADATIAVCGAAGLVQ
GEGACSGVALDADQLEVLVRYPYTSGPLVPVLPGVLPWLPTQLAARASVRLGGPLGGS
>AHV91820.1 bacterial regulatory s, tetR family protein [Bordetella holmesii ATCC 51541]
MSKAAIYHYYPTKQDIYDAIIVEVLSGLLGAVTQACEAQGAADARLHAFMLAHADYFESHHDQFVTMLIGYSGMTMPEQA
DAARLRDRYEALLREILAQGATQGVFRQRDVAATGRAVLSLLNWMVRWYKPGQGQTARAIAQDYFDLITGGLCRPDNEPR
>AHV91821.1 transcriptional regulator, Spx/MgsR family protein [Bordetella holmesii ATCC 51541]
MTTTLYGLNKCSTCVKAREWLKAHGVKHEFVDYRDHPVPADTLKAWAEQLGGWDKLVNRSSMTWRALTEEQKAAATPAQW
TRLIAEYPALVRRPVTVTPDGEISVGFSEKRYTERFA
>AHV91822.1 DNA-binding response regulator [Bordetella holmesii ATCC 51541]
MLSMDGLLRIGLLEDDEDFREELRLGLEGYGFKVVFGCGDSVSFHEAVQAQSCDIVILDANVPGEDGFAVATRLRAQGHL
GIVMLTGRGALEDRVRGLEGGADAYLTKPVDLLELSSVIRSLARRMRLARAGAQEEPAPVQASNSRQPGLPWSLMDGGWV
LAGPDGGSLHLNAQERVFLMTLMQSAGEAVTRQVMAEMIQPENPAKFEPRRVDVMVSRLRSKAQSAGFKLPVLSVRGQGY
VFVA
>AHV91823.1 lipo-releasing system ATP-binding protein LolD [Bordetella holmesii ATCC 51541]
MTDSVQAALRAEHLSKVYDEAPARIQVLDDVSLVVSRGEMVAIVGASGSGKSTLLHILGLLDVPSSGSLIVDGTPADGLS
EARKSALRNRSLGFVYQFHHLLPEFTALDNVAMPLIVRRADRDQARAQAREVLSQVGLAEREGHYPGQLSGGERQRVALA
RALVTRPTCVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFAIVTHDPELAARADRQLHMENGRLLPG
>AHV91824.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MSIQDRASKSNRLQAGVWLVLLLLAIGLGLVLLQRVAVSNGTLPQEIKLLELMTASGTVGAVIVALWLSFVQRREQERAS
AAVAELFQRMLVGNILAAWSDLLLLREVCARTDLDGLRQYLRSARAGLYFDALHAHIEKSTTLPHADLIVVANIYGYIQL
IEHETRAWHRMSAQEDDLESLSRLVQTTGQLFATFAATSWIRSELPRWDKDLAA
>AHV91825.1 acetyltransferase domain protein [Bordetella holmesii ATCC 51541]
MTAIASDIQLRPLERGDLHFVHALNNNDAIMRYWFEEPYEAYDELMALYDRHIHDQFERRFIVQREAGQMVGLVELVEIN
HIHRRAEFQIIIAPGFQGHGYAKAATRIAIG
>AHV91826.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MGQAIARRLADEGASVVLGDIAVRSGERRAGDDPLHRVPLDVTKPGSWADALQAVLDLHGRLDVVVNNAGGVSSESVSFE
DIDVAEWERLFAINVDGVFHGVQAAMRVMKQQPDGGAIVNMGSIAGFVGSATGGAYGTSKSALRNLTQQAALSAARAGYR
IRVNVVHPGYVWTALIAEKLAAQFGGQEAARAAVRAMNPMQTIVTAEDVAASVAFLGSSDARMITGAELVVDGGRLIQ
>AHV91827.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MLYREEDTRPYECDGLSLFRALPAAVVLPETEAQLQAVLRLCKRLNVPVVARGAGTGLSGGSLPHAQGVLLGLSKFNRIK
RLDPAAGLVVVEPGVRNLAISEAASAYGLYYAPDPSSQIACSIGGNVAENSGACTV
>AHV91828.1 phospholipase/Carboxylesterase family protein [Bordetella holmesii ATCC 51541]
MSQDLLECIEVETGANPTHAVIWLHGLGADGNDFVPIVPELGLTQPVRFVFPNAPVAPVTINGGMAMRSWYDILVMDLVR
QEDAAGIRASQAAIQKLIARENARGIPTSRIVLAGFSQGCAMTLHTGLRLAEPLAGLVGLSGYLPLIDMAETERHPANAQ
TPIFMAHGLYDPVVALARAEASRDKLQSLGYAVQWHSYPMPHSVCLEEVQDIGKFLRAVLR
>AHV91829.1 pyridine nucleotide-disulfide oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MMPALSAPERIVIVGGGAGGLELAAQLGRAYGPERVLLVDSRPFHIWKPSLHEVAAGTLDIHQEGLSYLMLARLAGFSFA
QGELTSVDRAARRIRIGAVRDPRGQEILGPRELSYGNLVLAVGSASNFFNTPGAAQYAVTLDNTENAEAFRLTILKAMAQ
VDQDKLRNPSARLDLVIVGGGATGVELAVELTEASHVVSTYGLPNFRVERDMAITLVEGAPRILSALPEKISRAATARLT
ELGIRVETHCRVAEVSPDSVKTADGRSFAASLCLWAAGIRGPDLLAQLGLPLNKAGQLIVNERLETEDPYVLALGDCCAA
PWHGERIVPARAQTAHQEASYLARKLGARLAGKDEPQQAYVYRDYGSLVSLGQGAGVGSLMGKLAGRGLFVSGTLARLMY
MSLHLMHHRAVLGVSRTATMALARLLMRRTHPRVKLH
>AHV91830.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSAPVCLVTGGATGIGAATALRFAREGWAVAITNFDDSTRPAAQATAAECHARGADAVILDADVGQDQDCRSLVQTVAQR
WGRLDCLVNSAGTTRVIAHADLDGVDAEEFERVYRVNLIGMFQMTRAAADLLRTRAAHECSAAVINISSLAALNGTGSSI
AYAASKGAVNALTLSLARTLAPQVRVNAIAPGMVDDGLLRRTLGDEAYARVLTSMRENAPLKRVASPGEIADLCWFLAAQ
APAMTGQVLAIENGLLLNT
>AHV91831.1 SIS domain protein [Bordetella holmesii ATCC 51541]
MTSHFRDAMALCEQSMHALSEPLAAAVELLFAALANNGRILACGNGGSAADAQHFIAELVGRFERDRLPLAGIALNTDTS
ILTAVANDYGFDEIYERQVNALGQPGDVLVAISTSGNSPNVVRAMEAARDREMHVIALTGKGGGVVGELITPNDVHLCVP
HDRTMRIQEVHILLLHALCDGIDALLLGDTE
>AHV91832.1 sensory box protein [Bordetella holmesii ATCC 51541]
MQHFSWGRWLGRHAAEQGARLAALDKVQAVIEFDLDGQVLAANDIFLETFGYTLPEILGQHHRIFIDAEERDTGAYQRFW
EKLALGMPDSGRYRRVAKDGRDIWLQASYNPICDAQGHPVKVVKYATDITAEQLRRADAEGQLEAIGKVQAVIEFDLQGY
ILHANDLFLGALGYRLDEVVDQHHSMFVQSEERRSAAYGDFWRRLSSGEHQTGQFLRIGKGGRNVWIEASYNPIFDADGR
PFKVVKYATDITRRFTAAQTLRVAVQSLSENAERASQANDLAQEACLVAEQGGQTVHNVISTMNAITASSRKISEIIGVM
GGIAFQTNILALNAAVEAARAGNHGKGFAVVAAEVRSLAQNSAAAAKEIKDLIRSSVQQIERGASLVQSAGSTMTDIVAS
SRRVTEIMAEVVQESLEQSGRLGDVTEDLTQASAGGRQAPVARLALTEPRALRIDAARPALVTH
>AHV91833.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MTISVGDRVPDGTLTEFIETETAGCQLGPNPFQVADLTRGKKIALFALPGAFTPTCSAKHLPGYIAQAKAFADKGVDEIW
CVAVNDAFVMGAWGREQQATGKVRMLADGSALWTRELGLELDLIARGMGVRSQRYSALIEDGVVTKLNIEGPGKFEVSDA
DTLLSQI
>AHV91834.1 cupin domain protein [Bordetella holmesii ATCC 51541]
MSMFAPRSVELVQALQDVNMETLRSPAVGIRVDVSDIQSEVPVHRHQQGQLVLALKGAAICEVADALWMVPPHCAVWVPG
MMPHSIRATANARLAYLFVQPGAAALPARCCTLGITALVRELVLEMARLPADYPGDGPEQRKATVLLEELTRMPVTTLHL
AVSQEPRVRRIARRLAEHPADRRTLGEWAAWVAMSERSLARLVQAETGLSFGRWRQQIHLIEALRLLASGHRVQQVAGAL
GYDSVTAFISMFKKSLGKPPARYIAEMGLDAAQPYR
>AHV91835.1 hypothetical protein D560_0817 [Bordetella holmesii ATCC 51541]
MALKVFDLQCEHGHVFEGWFGSHDDYDAQQARGLLSCPVCASASITKRLSAPHLNVAHLHQPTPAPTAAPAAMQAEVMRK
VREILRKTENVGAGFAAEARRIHEGEAVERPIRGTATADERAELAEDGIDILSVPAFLDEDQLQ
>AHV91836.1 AAA domain family protein [Bordetella holmesii ATCC 51541]
MRESRERVRAAIVNSGFEFPAGRVTINLSPGDLPKASSRFDLPIALCILMASGQVAPAQATDGLVLVGELSLSGALVPVA
DALALALGVARAPEAAVLILPEASAAQAARVPGLKVLAARGLAEVAAHLAGLAELPVAQAAARPPLVAGPCLSDVRGQPL
ARRALEIAAAGGHSLLMCGPPGAGKSMLAQRLPGLLPALDDAAALEAAAIARLAGLADPPFGLPPFRSPHHGATAAALVG
GGSPPRPGEISLAHQGVLFLDELPEFERRALQALREPLESGEVSLSRASGRLCFPARFQLVAAMNPCPCGWRGHPTRACR
CSPQQVARYGERIGGPLRDRIDLHLWLPAVDPDCLGGPSGEASSVIRERVHACRRVQWQRQACLNAQLQGEALVRHAGLD
DGTRKWFVQAMRRLGGSARASQRVLRVARSVADLAGDGRIGRRHLAEALQFRDLGKAA
>AHV91837.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MLAVALAVLPLALNNNFLMDLAIRICLAGIAAVGLNLLMDFAGQVSIGHAAFVAIGAYGGGILTAHLHWPPLLAMAAAVL
GADGVAYVVARPILRLRGHSLTMATLGLGIIVNIVLINEVDWTGGPDGMPVGPLEVMGHAVEGMGMWYGLAAVLLFGAVA
LSLNLYASQAGRALRGLHGSEVAARVAGVNVASYKVRAFVASAVFTSLAGCLSAHYLGFITPSLAGFTYSVELATMVVLG
GMASTFGAVLGAALLTLLPQLLGGLHEYEMMCFGLILMLTMIFLPKGLVPTLQHLLRRRS
>AHV91838.1 aspartate--tRNA ligase [Bordetella holmesii ATCC 51541]
MRTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNADAFGTAERLRNEFCVRVTGLVRERPA
GTTNAELASGEIEVLCREVEILNASVTPPFQLDDDNLSETTRLTHRVLDLRRPQMQRNLMLRYRVSIEVRKFLDQLGFID
IETPMLTKSTPEGARDYLVPSRVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFL
TETEIRAIFESMIRHVFKVVQDVDLPESFPMMTWTEAMARYGSDKPDLRVNLEFTDVTDVMRDVDFKVFASAATTAGSRV
VALRVPGGAELSRSEIDAYTQFVGIYGAKGLAYIKVNEAGKGREGLQSPIVKNLHDAALAELVKRSGAQDGDIIFFGADR
AKVVNDAIGALRVKIGHSEFGKRTGLFTGGWRPLWVVDFPMFEYDEEEGRYTAAHHPFTSPKDGHENFLETDPGKAFAKA
YDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGFLLDALRYGAPPHGGIAFGLDRIVTMMTGAESIRDVIA
FPKTQRAQCLLTQAPSSVDDKQLRELHIRLRNTEVK
>AHV91839.1 ubiquinone/menaquinone biosynthesis methyltransferase family protein [Bordetella holmesii ATCC 51541]
MQKPSSPSDTSPSGSTHFGFQSVAEGDKARKVAEVFHSVASRYDVMNDLMSGGLHRIWKAFTIGRAAVRPGMKVLDIAGG
TGDLARAFAKRAGPTGEVWLTDINDSMLRVGRDRLTDSGLILPVAVCDAEKLPFPDGHFDRVSVAFGLRNMTHKDRALAE
MTRVLKPGGKLLVLEFSRVAKPLAPAYDWYSFNVLPWLGKKVANDEASYRYLAESIRMHPDQDTLADMMRAAGLDRVQYF
NLTAGVAALHEGVRLS
>AHV91840.1 putative autotransporter [Bordetella holmesii ATCC 51541]
MSLNNVELVGGAGGSGAQAAAVGGGSADGFAGGSVFGGISTGGAGGEALLIGLAEVSAPLTRSGGAQFTNASRGNGGNVT
GNRITLSGNTSITGNIYGGVSQGGSMGNDGVDGTGGLASGNVVTLSGSQLKIGTPASGGSVYGGLSINGDGTQNTDPEYA
SFYQGNTLNLVAYRGSVKSVRNFENYNWVLPQDVFGGDTLMTINNPSDPAYKVELNGTKHLVDVLASGNQLNAGDKVVLI
NKAQGAPELLNNRIEQGFFVVYDASMAVQNEELVLTIQGVVDDKPDGKVSPESEAFLQGRAAQLAFVDQGADMISDYGIS
SARASLSKQSANLFVVVDGGSSRYKTGGHVRIHDFKLAVGAAKAFELKDKSAGMVGVFVEHGDGRYSSNNDFGAYGEVDG
SGRLRYNGVGAMFHVDVAGTGGGQVDATPDIFDARHGLYVNAAFRVGDAKVGFRTDDLVNANGESGRYDSKSRYMTAMAG
TGYVWALDSKQAVDFYGRYTWSRLNAKDVQVVDEDMSFGSAHSQRLRVGARYGYAYEENVIPYIGLAYERNFKGDVSGSA
YGFTIKENSLRGNTGILELGAMVKPMGVNAPLSVHVGVQGYVGQREGVSAAAKVRYVF
>AHV91841.1 glucose / Sorbosone dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSCHRFLWLSVVVGTFSLGAAHASTSLTPTAANVRVTEVARGLEHPWALAFLPDGSALITERPGVLRQLRAGKLSEPIKG
VPQVYAQGQGGLLDVALSPGFAQDRLVYLAFSQAGDGKSGTAVGRGRLSEDGMTLGDFTVIFRQLPKLSTGHHYGSRLAF
DKNGHLFVALGENNQRPTAQDLTKLQGKVVRLNLDGAVPDDNPFVTDKQARPEIWSYGHRNPQGLAVNPWTGALWEHEHG
PRGGDELNVIERGANYGWPLATHGINYSGLRIPEAAGTDLDGGAAPKYWWAKSPAISGMAFYDAPTYPQWRRSLFIGALA
DQSLIRLTLDGDNVVAEERMLKDLGARIRDVRVGPDGAVYVLTDAAQGSLLRLTPAEQP
>AHV91842.1 cytochrome b family protein [Bordetella holmesii ATCC 51541]
MAGDKTVETTGLLGWLDRRFPVTSTWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMHYKPDAEKAFQSVEY
IMREVPWGWLVRYMHSTGASMFFVVVYLHMLRGLFYGSYRKPRELVWIFGVAIFLCLMGEAFFGYLLPWGQMSYWGAQVI
VNLFSAIPFIGPELSIWIRGDYVVSDATLNRFFAFHVIAIPLVLIGLVAAHLIALHEVGSNNPDGVEIKDGPKDKYGRPL
DGVPFHPFDTVHDIMGVAGFLLVFAAIVFFAPEMGGYFLEYNNFLPADSLKTPPHIAPVWYFTPFYSMLRATTDEFTWVL
AGAAVLGAIALLLKSQFKGLARLALPVLLIVIAVLLRTIDAKFWGVVAMGGAVVILFFLPWLDHSPVKSIRYRPTWHKWF
YGIFIVNFLVLGYLGTQPPSDAFNLTSQIGTLIYLGFFFLMPIWSRLGTFKPVPDRVTFHRH
>AHV91843.1 VWA domain containing CoxE-like family protein [Bordetella holmesii ATCC 51541]
MLIDFFYHLRAHKLPVSVQEYLTLLEALRQRLMAPTLDDFYFLARTALVKDESLYDRYDAAFGAYYRGIAAALPADRDIP
LDWLIKEFEKTLTPEEKAAIEAHGWDKLMELFKQRLEEQQERHAGGSKWIGTGGTSPFGNGGYHPEGIRVGGDSAGNRTA
VKVWDMRQFRDYDDQLELGTRNFKVALRRLRRFARQGADLELDLDDTIASTARNAGHLDLRLVPERRNTVKVLMLLNVGG
SMDDHIARVEELFSAARSEFRHLDVYYFHNCPYENLWQNNRRRQNERFETWDVLRKYNADWRLIIVGDATMSPYKILQPG
ARSSTTTRRPARSGCAGCSTPGPRPPGSTPSPPRPGAIGSRSPCCATSCRTACTRSPWRAWNRPCASCPNSVQPSTGRRG
VSSVS
>AHV91844.1 phosphoglycolate phosphatase, bacterial [Bordetella holmesii ATCC 51541]
MSHYRAALLDLDGTLLDSIPDLAMAANAMRVELDLPPLRDDVLATFVGKGVDNLVRRTLAASRDGGEVEDALFAKGRESF
HRHYHLVNGDRARVFDGVIDGLKLMRDMGLKLAVVTNKPTEFTVPLLQRTGLAGFFEQVVCGDTCARRKPDPDQVLHACE
QLGVSPREAVTIGDSVNDAQAGRSAGTAVLAVPYGYNEGMDVRSLDVDGIVDSLVEAVAWIKRQSESGRPL
>AHV91845.1 methionine-R-sulfoxide reductase [Bordetella holmesii ATCC 51541]
MEKVRKSDAEWRAQLSPQEFHVAREKGTERAFTGRYWDTFTYGIYRCVGCGTALFASDTKFDAGCGWPSYFEPIDPSRVR
EETDSSHGMVRTEVLCNICDSHLGHVFPDGPPPTGLRYCINSLSLTFEPLDPA
>AHV91846.1 ribosomal protein L19 [Bordetella holmesii ATCC 51541]
MNLIALLEQEEIKRLTGDKPVTEFAPGDTVIVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQL
YSPQIAGIEVKRRGDVRRAKLYYLRNRSGKSARIKEKLVSKQVAQG
>AHV91847.1 cysteine desulfurase IscS [Bordetella holmesii ATCC 51541]
MSNRPIYLDYSATTPVDPRVVEKMIPWLYDNFGNPASRSHAFGWDAEEAVENARAEVARLVNADPREIIWTSGATESDNL
AIKGAANFYAERGKHIVTVKTEHKAVLDTCRELERQGFEVTYLDVKDDGLLDLDAFKAALRPDTVLVSVMMVNNEIGVIQ
DIEAIGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRS
GTLATHQIVGMGEAFRLAREEMGTENERVRMLCDRLLAGLSQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELA
VSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEVDFAVELLKGRVGKLRDMSPLWEMAKEGIDLNSVQW
AAH
>AHV91848.1 degT/DnrJ/EryC1/StrS aminotransferase family protein [Bordetella holmesii ATCC 51541]
MPRLARRTNDFLTFQVVELFKEAQALSAAGRDIISLGIGEPDFTAPPQVIEALERASRAGLSGYCAPGGLMPLREAIAQF
YADEFGAPIHPERVIVTAGASGALALASAALVNPGAEVLMPDPSYPANSNFVLAAGGVPRLVPSNAAKRFQLSAADVREN
WTTATEGVLIASPSNPTGTSIASDELAALLAEVRQRGGYTIMDEIYLGLTYGQTPRSALTLDDDIIVINSFSKYFHMTGW
RLGWMIVPQAMVSTIEKMSASLQICAPTLAQHAALACFKPDALKIYAQRRDAFRQRRDYLLPEFERLGIPVPVKPDGAFY
IYADIRHLGMDSMAFSQRLLHEAGVAAVPGVDFGPAHGLSTMRFSYATGLDRLQEAIGRIERLL
>AHV91849.1 phosphatidylethanolamine-binding family protein [Bordetella holmesii ATCC 51541]
MAPHEARQGLNDYTGWFAADRDMSGDYFGYDGPCPPWNDAIVHRYVFTLYALDVAKLNVHGKFTGADALKAMQGHVLAQA
AVTGTYTLNPALAPRQIGATSAS
>AHV91850.1 putative cardiolipin synthase YbhO [Bordetella holmesii ATCC 51541]
MRTDTARLSWTDGNAIDLLQNGADFFPALCAAIDQASVSVHLETYIFILDRTGRQILDCLERAAQRGVKVRVVLDGFGSA
TSAPEVMQRIHDAGGHCRVFRPEPRWLGRLKFSRNRLRRLHRKVTVIDAAIAFVGGINIVDDYDDLDPDDDIPGPRFDFA
VRIEGPLVPQIIYAQDLLWVRLSWARLRRHPSDWRRLRLRRPHPQHGRACGSLRAALVLRDNLRFRQTFERAYLNGIEHA
RHEVLIANAYFFPGRQFRRTLAQAAGRGVRVRLLLQGRPEYYLQYFASRSLYDQLLRDGIEIYEYMPAYLHAKVAVIDDI
ATVGSSNLDPFSLLLAREANVVVDDPAFAHDLQQRLERAIADGGQLIRPLDYRRRSWMWRVVDVLAYTALRVGVALTGRA
DKF
>AHV91851.1 marR family protein [Bordetella holmesii ATCC 51541]
MTDTPDLESRAAPQDHHALRLWLRMLTCCNLIESEIRSRLRNEFDTTLPRFDLMAQLQRAPKGMKMGELSRHMMVTNGNI
TGITDQLEKEGLVVRTKVETDRRSSLLKLTPQGKRVFARMARAHENWVKTMFGDLPEGSRDALYKALGELKLQVVARQGQ
Q
>AHV91852.1 EAL domain protein [Bordetella holmesii ATCC 51541]
MTWALADQAMAQTARSVPMGRGASLALNVETCQLGNAQLMTHLMGALQLHALPATALTIEVTETGPLSVQASTLETLVRL
RLLGCTVSIDDFGTGFSSMERLCNLPFNQLKIDASFVSRLPGDARSESVIAATLSLAERLGINVVAEGIETADRRNALLD
MRCALGQGFWYARPMSGDEYESWLFNPMVANT
>AHV91853.1 riboflavin biosynthesis protein RibD [Bordetella holmesii ATCC 51541]
MRRALELARGVIYTTSPNPRVGCVIVRDGQVLGEGATQPAGGPHAEVMALRAAQAGGHDLAGATVFVTLEPCSHYGRTPP
CVDALVAAAPARVVVALGDPNPRVAGQGFARLRAAGIAVTSGICEQEALALNAGFVARMSRATPWLWLKLAASLDGRSAL
HNGVSQWITGEAARADGHAWRARADVVLTGMGTVLKDDPQLTVRAVQTPRQPRKAVVDGRFQVPEHARLFDGTPAWVFTA
IRDDAKAARLADKNVEVVCLPDAGGQRVDLAAMMRWLAAQDCNEVHVEAGAGLSGALLAADCVDELLVYLAPVMLSDAAG
MVQMPMLEHLDAARRFRFTDLVRVGEDVRLQARDHARWLALLASARRASEQ
>AHV91854.1 hypothetical protein D560_3965 [Bordetella holmesii ATCC 51541]
MNPQQPPRLGILPALIFSSRWLQLPLYLGLIVAQGVYVFLFLKELWHLVSHTNSFGEMDIMLLVLGLIDVVMISNLLVMV
IVGGYETFVSRLRLEGHPDQPEWLNHVNASVLKVKLAMAIIGISSIHLLRTFIEAGNLGSDNARFTETGVMWQTIIHVVF
ILSAVGIAYVDRLTSSADH
>AHV91855.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQVKSLIENWRVEYNTDRPHSALGYLTPAQFV
QARQKEGLLPLGSMSVPY
>AHV91856.1 sir2 family protein [Bordetella holmesii ATCC 51541]
MRAFVAGHGRLFVLTGAGCSTPSGIPDYRDGQGQWKRKPPIDFQTFMGTDLARARYWARGMIGWRRFGSVKPNAAHRALA
RLEAEGHIALLVTQNVDGLHQAAGSRAVVDLHGRLDEVRCTRCDWTGPRKAWQDQLEAMNPAWVFLDAEDAPDGDADLDG
VDFSFFTVPACPRCGGIVKPDVVFFGELVPGARTERTYAGLAESDAVLVVGSSLMVHSGFRYVQAAAREGKPVAAINLGR
TRADGLLALKIRQPCDQVLAALFSQQG
>AHV91857.1 sulfite exporter TauE/SafE family protein [Bordetella holmesii ATCC 51541]
MYVVVALGAVLAGFVQGLSGFAFGMVSMSVWVWVLEPRLAAVLAVFGAMMGQVVAAVTVRRGFSWSLLLPSLDMTWFKLI
LGCLLVLWCPAMLMARHLPQVSAGGRLADALVGMAGGVMGGLGGFTGVLPTLWCTVRGYPKDTQRTVIQNFNLSMLTVTM
GSYLAAGLVTSDMLPMFAIVAPAMLVPTLIGTKLYIGISEVRFRQLVLGLLTASGVALLASSIPLVLAR
>AHV91858.1 BCCT transporter family protein [Bordetella holmesii ATCC 51541]
MIACGLATLSAASGLDKGVRYLSEANMVLAVLLLLFVLFTGPTVFLLQAFVENVGVYLSGIVARTFNLYAYDQTDWIGGW
TLFYWGWWIAWSPFVGVFIARISRGRSIRQFLGGMLLVPTGFTFFWMTVFGDSAIFHILTGGMSDFGQAIRADSTLALFV
FLEQFPWATVMSFFCVVMVLIFFVTSADTGALVVDMLASGVDNAPVWQRVFWSILMGALAIALLLADGLKALQTATVASA
LPFSIVILISIYGLLKALKLDSAKRQLRYRSTSRGAVRPQSETWQRRIRNMVMMPRRAHVQRFIADVARPAMENVAEELS
KEGYACRVEEGDDGSVALHVAHHGQYLDFSYSVMPIAEIRPSLTPEDARDEEERRYFRAEVHLGEGGQDYDIMGWSRSEV
IGDILDQYERHRHYLHVVS
>AHV91859.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MKYAFIKAHEEQYAVRRLCAVLGVHPSGYYAWKVQPVSARGAQDKRVGALIEQCWEDSGRIYGYRKISSDLNDMGERCGK
HRVARLMRQAGLRSHTGYGRRPGGRGTRPSVVAPNHLQRQFRVDAPNQVWVTDITYIRTHEGWLYLAAVLDLFSRQIVGW
SMSDRMTRELAINALLAAVWRRKPEAEVLVHSDQGSQFSSHDWQDFLKAHRLRPSMSRRGNCYDNAVAESFFQLLKRERI
RRKIYSTRDQARADVFDYIELFYNPRRRHSYIGQVSPVEFERRYFLMNGTV
>AHV91860.1 fe2+ transport family protein [Bordetella holmesii ATCC 51541]
MLKKAFWLAAAAMTVSGAATAAEYPIGKPVEKGGMEIGAVYLQPVEMDPPGVMRAAKDSDIHLEADIHALANNATGFPEG
EWMPYLVVNFEIQKVGSQNVQKGHLMPMVANDGPHYGDNVKLEGPGKYKLKYTIQPPTADKMSHFGRHVDKETGVGPWFE
PFELEYEFVYAGTGKKGGY
>AHV91861.1 ribosomal protein L24 [Bordetella holmesii ATCC 51541]
MNNIRKGDEVIVLTGRDKKRRGVVLARVDADHVLVEGVNVVKKHMKANPMANNPGGIVEKTLPIHISNVALFNPATGKAD
RVGVKEEDGRKVRVFRSNGAVVGAKA
>AHV91862.1 flavo, HI0933 family protein [Bordetella holmesii ATCC 51541]
MFDVAIIGAGAAGMMCAAVAGQRGLSVVLIDHASRLAEKIRISGGGRCNFTNLGATAAQFLSENPHFCRSALAGHTPQDF
LGLIREHGIAWHEKHRGQLFCDHSSEDIIEMLRRECDRGRVAWRMPCAVQAITRDGQGWALATDAGALRAARLVVASGGM
AIPQLGATNFGLKVARQFGLKVVEPRPALVPLTFDAKQWQPFAELSGVALEVSLGTGQGKARGEFLEDLLFTHRGLSGPA
ILQISSYWKPGTIIDIDLAPGRDLAGELRQAKSGARQQMHTVLAGLWPKRLADAWLAQSDDPGLAQARLADVPDRKLLDL
ASRIHHWPLAPTGTAGYKKAEVMRGGVDTRALDQRSMQAREVPGLYFIGETVDVTGWLGGYNFQWAWASAVACGRAL
>AHV91863.1 enoyl-(Acyl carrier) reductase family protein [Bordetella holmesii ATCC 51541]
MGTPKDVAEVVAFLLSDKAGWVTGAIWDVDGGVMAGRN
>AHV91864.1 thioredoxin family protein [Bordetella holmesii ATCC 51541]
MPLLLPGTDSERLRQALARPDAWLIACFCAAWCSTCLQYRSKLEALAQARPEHVFVWIDIEDHPDLLGDEDVENFPTLLV
QAGGRTLFYGTMLPHIGHLERLLDSLAADAPAVKTALPDVGGLLAQA
>AHV91865.1 exonuclease family protein [Bordetella holmesii ATCC 51541]
MRALSGDFVVADLETTGLSAASCEILEFAAVAVDIEGWITREFSQVVRIQGTVPSFIARLTGISQQEVTRQGQPVEQVFG
DFRAFVGAAPVFFHNAAFDTRFLLAASQRCGLPFDNETYCTLRLARQAWPELASHKLGILAHHLGAATPTHRALADVHTT
VAVVLAARARLAVRQTPAPV
>AHV91866.1 pfkB carbohydrate kinase family protein [Bordetella holmesii ATCC 51541]
MAFDTIAVFEGHFKDHILPDRIQSLSVSFLVPGMRKEYGGCAGNIAYNMKLLGGQPVPVATVGEDSGDYLERLSGLGIDT
SRVKTVPGTFTAQCFITTDLDDNQITAFHPGAMAFSAQNDLSQAEAAWAIVAPDAKEGMFAHAQALAARGIPFIFDLGQA
MPLFDGADLERMLGLCQALTVNDYEASVVEQRTGRKMADIARHLRAVIVTRGAHGATLYTDGQEIQIEPVQAEDVVDPTG
CGDAHRAGLLYGLISGWSWADSARLANLMGAFKIASKGPQNHAPDRAEISRRLQQAYGLTLPV
>AHV91867.1 rare lipoA family protein [Bordetella holmesii ATCC 51541]
MRSPRALMMLLLLAVVLAGCSTPGKRGGGYYKDDGPDANPPANLDSIPDAVPRLEPLASGANRPYVVFGKRYVPDLTEQA
FRQEGIASWYGKKFHGNSTSIGEPYDMYSMTAAHPTMPVPSYARVTSKVNGRSVIVRVNDRGPFHSDRIMDLSYVAAHKL
GIIGPGSGAVVVERILPSEIRTMMANGGAASAVNGMEPVALADLPAATPTALPLPAPSPQASPPARRAAPGSIYLQLGAF
SQAANAHNVVNKVNGMMTGEPAATVEPANSLYRVRMGPYASREAALEAVRRVSDRTGILPSLAAQ
>AHV91868.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARTYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPTKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIP
LRGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV91869.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MSPRQQFWFVWGAPIYLGLLATFGLLAALLGTGLWHWASWAALTWPLLVIGWYWLRPQDSKRRARDAG
>AHV91870.1 fimbrial family protein [Bordetella holmesii ATCC 51541]
MQSAIRNPQSAIRNPQSAIRNPQSAIECVKYVAATLAIMGMMPTPARAVDGTITINGEITDQTCKINNADPPHNLIVNLP
KIGTKALKNTHDTAGATPFIIQLTDCPQTLNNQKVKAFFESGSTTDYGTGNLIAYTEANAQTNAASSIPDRTGATVFNNV
QIQLANPTGTTIKVGQPEASQAAQDTTITNNKATLQYLARYIKTGSSAISAGKLVSYVQYSIVYP
>AHV91871.1 alkylhydroperoxidase AhpD family core domain protein [Bordetella holmesii ATCC 51541]
MMQDWNAYRDSLLERVGDYAKQSPDVMRGLMTIDNAAVKSGHLEPKIHELIALAVAITTRCDGCISVPTKKAVEHGATFE
EITEALGVAIALNAGAALTYSARVVEAYQQLPAR
>AHV91872.1 acetyltransferase domain protein [Bordetella holmesii ATCC 51541]
MMTMMATFLDVIDQKTRSHYDEGKGLALRSLDPEADAAQLQQWFSMDYARFWSMQDSSVHQVRDFYTALCSSGHAGAWLG
LHHGRAAFLVECYDPARDQVGEHYCVRPGDLGMHLLIAPPTEHIPGFSRAVFALVMRFMFDRLHAARVVVEPDVNNTKIH
ALNLSMGFVYAGLARFREKTASLAFCTRAQFEQAQRQELTQ
>AHV91873.1 conserved region in glutamate synthase family protein [Bordetella holmesii ATCC 51541]
MHWIAGRHTAFALILIGAAASITLAELRGPVWLWAALPLAALSLLGIYDIVQPRHAIRRNYPVIGNLRFLFEFIRPEIRQ
YFLEDDTNAAPFSRAQRSIVYQRAKQEIDKRPFSTQEDVYGDRYEWINHSMAPSHITDSDFRVQVGGADCTQPYSMSAFN
VSAMSFGALSANAVLALNDGARIGNFAHDTGEGGISRYHRQPGGALVWNIGSGYFGCRDEQGNFSEEAFVRNACTPQVKM
IEIKLSQGAKPGHGGILPASKVTLEIAEARGVPAWQDCNSPSSHSAFDTPVGLMHFVARLRALSGGKPVGFKFCVGHPWE
WFAIVKAMLKTGITPDFIVVDGAEGGTGAAPVEFVDHVGTPLREALRLVHNTLVGVNLRDRIRIGASGKIITAFDMARVM
AMGADWCNAARGFMFAIGCIQAQACHTGKCPTGVTTQDPMRQRALVVPDKAQRVAHFHQNTLHALAELLEAAGLTHPNQL
RTHHIARRISSSEVRLLSALFPELTPGELLRGEFRHNVFKVGWSMATADSFQPVTDITTALAELQPQQSEPA
>AHV91874.1 cytosol aminopeptidase family, catalytic domain protein [Bordetella holmesii ATCC 51541]
MEFSTQTTASLHQIKTAALAVGVYADGVLSPAAELIDRASNGAIRAVTKTEFRGRAGSVLVLRNLTAVAAQRVILVGLGK
QEEYNARAHSGAEQAFAAYCVNAQLAEGVSTLVALPIDTLGLRDRARAAAIAAGQATYHYDATFGKADRDARPKLKKITQ
IVERADTAQTQLGLREGQAIANGMELARTLGNLPGNICTPTYLGETARKLARDFKTLIKVDVLDRKQIEALGMGSFLSVA
RGSEEPLRFIVLRYNGKPVAAKKAKAAAGPVVLVGKGITFDAGGISLKPAATMDEMKYDMCGGASVLGTFRALGELAPAM
EVVGLVAACENLPSGKANKPGDVVTSMSGQTIEILNTDAEGRLVLCDALTYAERFKPSAVIDIATLTGACVVALGSVNSG
LFSKNDALADALLAAGRQAQDPVWRMPLDDAYQEQLKSNFADIANIGGPQAGAVTAACFLSRFTKAYPWAHLDIAGTAWR
GGKDKGATGRPVPLLMQYLLNTND
>AHV91875.1 inositol monophosphatase family protein [Bordetella holmesii ATCC 51541]
MLNTAIKAARRAGAIINRASLDPDRLTVARKGPRDYVTEVDRAAEEAIVEFLRAAYPDHAVLGEEYGLQGPDQAEFQWII
DPLDGTTNFIHGLPNYAVSIALTQRGQVTQAVVYDPARNELFTASRGGGTFLNDRRVRVSGRIRYHEALLGAHWPTPADA
DQGSSRFRNMAEGSTGVRRLGSTVLELAYVASGRLDGFCGVGLKPWDVAAGSLLVLEAGGLVADFDGEQGWMDTGNVLAG
SPKIFTHMLTALQAKA
>AHV91876.1 transcriptional regulator, LysR family [Bordetella holmesii ATCC 51541]
MTVRPQFMSGRGLAQPVNAAKLPALPDAEFVTLGAAHLSRPAETLLQILRDSELRGTWTTV
>AHV91877.1 TRAP transporter solute receptor, DctP family protein [Bordetella holmesii ATCC 51541]
MQLNRIFRSLIIGAGLSLALAPAAHALDVKLGHVLAPSHSWNKAAEGFAAEVKEKTGGRVNFILFPSGQLGNEKTMLEGL
QIGSQGAAIIGSGSLQPIEPKFGVVELPYTWNTAAQAYRAYDGELGAALSKLAEKKNLVILSWWENGFRHMTNNRGPITT
PADLSGLKTRVTPDKMRLDTFSALGANPAPLAFGELYSALQQKVFDAQENPLSIIYTSSFFEVQKHLSLTGHVWGPANLI
ISKPVWSRMSADDRKVIQEAADHWRDQQRKMITDGEAHYIAQLKEKGMQVNDVDKAAFAAAVEPVWKTYSVTYGPELMGL
VQKYREAK
>AHV91878.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MAADAPAMCSAVVLSCFVVVGLLDSVHFQLRLPPAPAATAATSPTYAPVVTSLLDSLLAPSVLAKPEKTYSAPLASHQFS
KESMVAEDGAVSRGFPRLRHGGAHLQDPATESWPDIRLRLARGLGAGLAVSLLLAGALAFWLGRRTGAARVGAADLLRGN
SVVPWRAMLMTLACIVVLAGTIGALSTGYHVLGTDRTGNDVLWQALKSIRTALVIGTLTTLAMLPPAIVFGLAAGYFKGK
VDDVIQYIYTTLTSIPGVLLVAACSLMMQVYIENHAEYFNTSAARADARLFLLCMILGLTGWSALCRLLRAETLKLREQE
YIQAARAFGVSHWRIMARHLLPNVMHIVLITAVLEFSGLVLYEAVLSYLGIGVDPSMSSFGSMIDGARLEMSRDPMIWWN
LLTAFVFLLALVLAANLFADGVRDAFDPRSRRFRFKLKPVSGGTP
>AHV91879.1 tetrapyrrole (Corrin/Porphyrin) Methylases family protein [Bordetella holmesii ATCC 51541]
MSGALHLIPVGLGEAPVERWLPSDVRALAGRLDCYIAENAKTARAFLKLIGTEHPLQEITIHTLNDQADARQIEAWLAPI
KAGKEIGLVSEAGCPAVADPGAKVAAVAHRLGYTVKPWVGPSSILLGLMASGLDGQRFAFHGYAPVDATERAKQLRAWEQ
HSARHDQTQMLIETPYRNMAMFGTLLAALRGDTRLCVARSLSTEREWVRTRTVAQWQQDAPPDLDKQPTLFLFLAR
>AHV91880.1 hypothetical protein D560_3951 [Bordetella holmesii ATCC 51541]
MVYLQITLKIANANRAAAAGVYQNYKAAFLDTIKGAHSKELLVRDEDVQVQHGFDTVENANAYLQSDLFTADVVGGLKPL
LDAAPDVRIYSVA
>AHV91881.1 4Fe-4S binding domain protein [Bordetella holmesii ATCC 51541]
MALLITDECINCDVCEPQCPNEAISMGEDYYVIDPDRCTECVGHYDEPQCQVVCPVECIELHPQWKEGQESLMAKYRRLT
GAPA
>AHV91882.1 putative virulence protein transporter [Bordetella holmesii ATCC 51541]
MNLEVPYQFPSDSSASILTSGLLGEQYIGVTPGSEEENFADGGKIRYTQSAVVLEQLISKFLYGTAEKQGTAAGESGAQ
>AHV91883.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MWIPLLRRYAALTTLLVCGAATAQEQTAPKPAQDPTPWLDTVSVTAPLPREHIYTSSEIRATPASNRDLSSLLSTLPSVR
QDNAVADSAGRGSLDVADISFHGSSPFQNRFLINGVNATSQVDPSSKDRLLGSVPSNPQAYFLDTALLGEVRVFDSGIPV
EYGSFTGGVVDASLRRPSGGNHIELGYRWNSSNLTRQRIPDYDLEKWTQGEPGFTPRWRKRFYTVTSDLSLGDRSGVILG
VSRRESHIQRFRLGAMNDLDLIEQDNYADRVDNFLADFTHRIDSRTLLDLNIKHANRREHLVSIESRDTDWRNQHLAHGV
DLGLEHESGIGQWSLRAGLDDFNSRQNSVHNAFVQHEFEDGRPDFSSGGYGKSERGQRNLTFNSRLDLAPWQAADWHFSP
YVGLQVEHAQARFKRYREAYSYRAIHMLDGTEAQSSKVRHKPGSVSLQHTQLGLYASNDLRWRRWTLMTGLRYDKDNFLN
QRHIAPRSRLDWDARGDGNTVLSAGWSRYYGAQALKIALAEEFSRLSEVVLDVFGNPVVDSSLATRVDYAGLRSPYDDEW
AFSLTQKAFGLQGVLSFVHRNGRDQVVRRGDSYTGYRYTNEGRSRTRDWTLTVSNENPWRIRQTLWQASLSWGYQKSQRN
TRLAEGYEASPAERDAYVIYRGKRIRASDLPPGDFNLPHKVSLDIHGQWPQLGLSWNNALNWQSRRHDILYVDSTPGRHP
LDIYAPVRLPSHWTWDTRIAWYPSFAKGLMMAVDVLNVLNHMPPLTATRPGNDIDERRFRTGREIWLQVAYRY
>AHV91884.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQVRIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHN
>AHV91885.1 translation elongation factor P [Bordetella holmesii ATCC 51541]
MKTAQELRVGNVVMVGKDPLVVQKTEYNKSGRNAAVVKLKFKNLLTGSASESVYKADEKFDIVLLERKECTYSYFGDPMY
VFMDTEYNQYEIEAESMGDALNYLEEAMPVEVVFYDGRAISVELPTILVREITYTEPAVRGDTSGKVLKPAKINTGYELN
VPLFCAIGDKIEIDTRTNEYRSRVN
>AHV91886.1 cytochrome c-type biogenesis protein CcsB [Bordetella holmesii ATCC 51541]
MNTSTRSQPWHGSFSQTGDQRAVRGRPDWTDGFFFLLLAVGAGYALTRLGQSMDYYEKIILCGTVPALAWLGWLWRPLRL
LMVACALAAGLALLLYQNDLARAEQVFFLKYLFSSQSAILWMSALFLLATACYWIGIVSPTAAWLGTALTWGAVFAGITG
LLVRWREGHLMGPDLGHIPVSNLYEVFVLFALITALFYLYYERKYATRALGGFVLLVISSAMVFLLWYAFTRDAAQIQPL
VPALKNWWMKLHVPANFIGYGTFSLVAMVGFAYLVKQHGQTTSWIKLAPLFVLGVLLCGEPMVFRTTGLSATWMVYGGIG
VVIVGAILLARRRIAQALPALEVLDDIMYRAIAIGFAFFTVATVLGALWAADAWGAYWQWDPKETWALIVWLNYAAWLHM
RLIKGLRGTVAAYWALVGLLITGFAFLGVNMFLSGLHSYGEL
>AHV91887.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91888.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MQTKTLTEQVACQLADEIGRGDYPVGEKLPSGRALAQRYGVSAAVIREATERLRSQGLVRSRQGSGCTVIARTRVQGFEL
PLEIGLDRVALSAVYELRMDLEAGAAALAAQRRDAADLQAMQCALSALELHLEDPVQGSEHDVAFHLAIARATHNEHYQR
LLHYLNLQLRQAVSAARANTARQQGLPRAVHGEHIAVFQAIAAGNAEAARQAALLHLRNASVRLQLDFSLTA
>AHV91889.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MSNVVLFDERVADNGARLGVATLNAPQTLNGLSLEMVDLLDAQLRAWARDPAVAMVILQGAGEKAFCAGGDLHGLYASML
EHKGQGPWANTHARDFFEREYRLDFRIHTYPKPILCWGHGIVMGGGVGLMMGASHRVVSETSRVAMPESTIGLFPDVGGT
WLLNRMPGRAGLFLALTGANLNASDAIYAGMADFRLDSSVWPAFCEALLHQPWATQPDGHGSANVAPRSINDGLLRQSLM
AHEPAAPLEPGPLRQHAFQINSVCGSNRLDEIYEDIARLKDHADPWMTRAAKTMLAGAPGSARLAFTLLQRMRLRSLEDV
FRAEYVAALACVAEGDFQEGIRALLIDKDKQPQWRPASLVQADEAWVQQFFTESWPEGVPHPLADLGPRFA
>AHV91890.1 regulatory, FmdB family domain protein [Bordetella holmesii ATCC 51541]
MPIYAYKCSSCGFAKDVLQKISDAPLTDCPECGKSSFTKQVTAAGFQLKGSGWYVTDFRNNSSGNAPAAKAAPAESGAAA
ADTSSASAPASTPAAAPTTPGATT
>AHV91891.1 mechanosensitive ion channel family protein [Bordetella holmesii ATCC 51541]
MQWQTVAATLDEYTPGQPWAQTLVGVAVLVVAALFVQWVVARLVLYFAHRLLRASGHEDWDKALLRRRAYHNLWYAVPFA
VVSVGIGLVPHAERVVTLVGRLAHAGAWICVFVAVSGVLSAWQDTYSATTRAQTRSIKGYIQITKLVMVAICVVLVLSIL
MDRSPLWMISGLGALSAVLLLVFKDTLLSLVASTQLTSNDMLRIGDWIEMPQANADGFVKDIALHTVKVQNWDNTVTTVP
TYKLFSESYRNYRQMFESGGRRIKRTLRIDATSVRFLDTAESQCLMRFRLLHDYLEAKEHDLARANQTLGDLAQVPANRR
RLTNIGTFRAYGLAYLRQHPEVRQDMAMMVRMMEPQAEGIPVEVYCFTALTAWVEYERIQGDIFDHLLAILPELGLRLYQ
QPSGADLSAFSGQLGQTALRHARLEQAPADAGWDESAMR
>AHV91892.1 thiamine-monophosphate kinase [Bordetella holmesii ATCC 51541]
MASEFDLIARHFTRAAPGDILGVGDDCALFPVPQGMRVAVSKDLLIAGRHFYPDADPESVGHKSLAVNLSDLAAMGAQPL
GCLLGLALPSMDEPWLAAYARGFHALAQASGCPLIGGDTTRSLHDLTLSVTVFGAVPAQAALRRDAARTGDDIWVSGELG
AADIAYRLLDGQLPADAARLAQTRRALEWPQPRLALGAALRGLAHAAIDISDGLAQDLRHILAASGVAAELRYADLPRAA
GLAGLDDSTLQRALLGGGDVYELCFTAPPERRAAIEHAALACQTPVSRVGRIMPGTGLQVLDAQGQPLPHIPGGFDHFGD
VA
>AHV91893.1 hypothetical protein D560_0782 [Bordetella holmesii ATCC 51541]
MVTDHGKVRRRGQAPGMQQWSQGLPGNALPTAYPDTSGRSA
>AHV91894.1 glutamate-5-semialdehyde dehydrogenase [Bordetella holmesii ATCC 51541]
MSSIEQTMLTLGVNARQAARAMMRASGSAKNRALLTMAELLTDGKQALQQANARDVDSARANGLEAAQLDRLTLSDRSVQ
LMAEGLRQIAALPDPVGSLGPTTVRPNGMRVAQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALHSNVA
LGAIIQAGLAAAELPPAAVQVVDTTDRAAVGKLITMTEHVDVIVPRGGKNLIARLAQKARVPLIKHLDGNCHVYLDAAAD
ADRAFEITFNAKTYRYGICGAMETLLVHQAVAPTLLPRIGQALQQHGVELRGCERSRAILPAIKPADEQDWGTEYLAPIL
AVRVVDTLDQAIEHIARWGSGHTDAIVTEDLAAAQRFQREVDSSSVYANLPTCFADGFEYGLGAEIGISTNRLHARGPVG
LEGLTTYKWVLTGEGQTRG
>AHV91895.1 bacterial regulatory, arsR family protein [Bordetella holmesii ATCC 51541]
MQESETAAAGPRTLRRGLTVLAALRDQGNNGLSVTDIARQTGIQRPTIYRLLAALLEAGLVSTVQGSKKYRAELGA
>AHV91896.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MYFFRSSPFMTRDLRNLSHGQHRSRTDLEARLAELGDLPGWPVSRQVALLRDVANCQLGEFLLTHGGLDAHWTDVVVGRQ
PGTGEATERMLLQRLPAAAATRARFEIFTRQLQHALRPGMALVSLPCGTLTDLLSLDFSQARPARLIGIDIDDAALATAA
RRAAELGMDVELRQEDAWRCRLDVAADIVVSHGLSIYEPDDDRVRELYRRCAAMLKPTGLLVTSFMTPPPSLSPDSPWRM
DILNPDDLMLQQVLFTRLLQPAWTGLRSHARTRALLQDAGLDEIVFHDDPAALFPTVTARRCG
>AHV91897.1 hypothetical protein D560_2105 [Bordetella holmesii ATCC 51541]
MEDININKNSCLRGFFCVLPQMHATMRGFSRDWADLIKI
>AHV91898.1 hypothetical protein D560_1852 [Bordetella holmesii ATCC 51541]
MNAPLASQILTAAMPPAPGARLREIPYNYTSFSDREVVGRLLGEDAWQLLSDLRGERHTGRSARMLYEVLGDIWVVRRNP
YLQDDLLDNPKRRKLLIEALHHRLGEIDKRREPESAAAQGHDPQRDAKVGELLTRAHAAVAEFEAQFDLTDQLRKQAQKV
FGRITARGNIKFDGLSRVAHVTDATDWRVEYPFVVLTPDGEEEIAALVRACIELGLTIVPRGVVRVIPVGPFR
>AHV91899.1 MMPL family protein [Bordetella holmesii ATCC 51541]
MIESQVTKPLENQLAGIEGVDVMTSRSRSERSLINIKFNLSRSPDAAAAEVRDKVSRARRFLPDEIDEPIIGKVEADSQP
IIYIAVESGHYSAIQTSDYINRYIKTRLSVLPGAAEVRVFGERLPSMRIYVDRDKLAGYNLTVLDVEAALRSQNVEIPAG
RIESRAREFSVVSSTDLQTIPQFENIIIANVKGYPVRLRDVARVQIDAANDRVLSRFNGKSALNIGITRQSTANPLELSA
AARQEVERLNESLPAGMKLNISYDTSVFIERSIDSVYHTIVEAIVLVVLVIFFFLRNLRASLVPIVTIPVSLIGACAIMY
MFGFSINTLTLLAMVLAIGLVVDDAIVVLENIFRHIENGVPRRQAAIQGSREIGFAVVAMTMTLVTVYAPLAFATGRTGR
LFIEFALTLAATVLVSGVVALTLTPMMCSLLLRHQTRHNRAYNLIEGWLEALSRGYRRSLGWSLAHRGS
>AHV91900.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MAKLIKPGSASLRFWQLLLLVVILLVWHFASLDSKVAFFFGQPLKVAERIWTWFITDADIYKHLWVTLSETVLAFVIGTV
AGLGSGLWLGLSPVASAILDPYIKATNSMPRVILAPIFGMWFGLGIWSKVALAVTLVFFIVFFNVYQGVREVSPTLLDNA
RMLGARRRQLLRHVYLPSATSWVFSSLHTSVGLAFVGVVVGEYLGSASGVGYLILQAEGTFDVNTVFAGIVVLTAFALIL
DGIVGLGEKRLMKWQRRSGETEKL
>AHV91901.1 hypothetical protein D560_2573 [Bordetella holmesii ATCC 51541]
MTINSYLTNLIIPFNLCLTLVVLGLVLCLVRWRKTGSTLIAAGLIWVFAWSLPVTSLWLGGALEKRYPHLAAQTAPTADA
IVVLGGNTANGRANWFLPYEKETAVVRVDVATDLYLAGRAPKVVLSGGALEGNVSEAQGMAHRMRQHGVPDSALVLENAS
RNTYENAALTEDTLRANHIDKVLLVTSALHMPRAMAAFSKQGVEVIAAPAPPQIVLPAGSGITPWIPDTRALDASRSIIK
EYAGLLVYWLRGWV
>AHV91902.1 acrB/AcrD/AcrF family protein [Bordetella holmesii ATCC 51541]
MNLSRPFILRPVATSFLMIALLLSGLLAWRLLPVAALPQVDYPIIQVTTNYPGAGPNVMARVVTATLERRFGQIPGLKQM
SSSSGHGVSVITLQFALTLPLGVAEQEVQAAISASRALLPQDLPAPPVYRKVNPADVPIMTLAATSDSLSLPQIYDLVDT
RMTQRLAQLSGVGMVSLAGGQRPAVRVQFNPLALAARGLQSTDVQNAIAKANSNQPKGSFDGPLRNVLMDANDQLQSAAE
YPELIVAWRNEAPVRLGDIASVDDGAQDRYLAAWVNRHPAVLINIQRQPGANVIEVAEQVKALLPQLAASMPAGVEIAVL
TDRTESIRASIRGVQWELVFAVGLVVLVTFLFLRNLPATLIPSLAVPLSLIGTFGVMYLAGFSANNLTLMALTIGAGFVV
DDAIVMLENIARYREQGLGRLEAALKGASQIGFTLVSLTRSLIAVLIPLLFMEDVVGRLFREFAVTLAVAILISLAVSLT
LTPMMCAYMLPAHHERPDGVMRRLQTAYARLLDVTLHHQRATLGVMLATLALTGLLYTAIPKGFFPTQDSGLLQGVTESS
QTISYGAMAARQQAMAEALLQDPDVVSLSSFIGVDSANTTLNTGRLLINLKPWDQRSAPMAEILQRIHERADTVAGIRLH
LQPVQELNIEDRVGRGQYQFTLNSPDAQLLSQWTGPLLQALKTNPVLRDVSADLQHGGRQTYLDISRDTAARLGLSMEDI
SQALYNAFGQRQITTLFTQSNQYRVVMEVDRALAATPQALERIYLQTAAGQPIPLSALATVTQREAPLSLSRLGQFPSVN
VSFNLASGASLGQAVQEIQDTRAGIGMPAGVELRMQGAAAAFQASLSNTLWLMLAAIITMYLVLGMLYESAIHPITILST
LPSATVGALLALMISNRPQDLIAVIGIILLIGLVKKNGIMMVDFALEAERQRGLTPKAAIREAALLRLRPILMTTLAALF
GALPLMLANGSGAELRQPLGWVMVGGLLVSQVLTLFTTPAVYLFFHKFGQRRAWKTRAEPRS
>AHV91903.1 methyltransferase family protein [Bordetella holmesii ATCC 51541]
MHLLASRIRPGGYLHCATDWQDYAVQMLEVLGGETLLENTAHDYAERPSYRPQTKFETRGLRLGHGVWDLIFKRKA
>AHV91904.1 ferredoxin-1 [Bordetella holmesii ATCC 51541]
MKFIALNAELAGEFASISRAKKPLPDADDWNGKQDKLQHLER
>AHV91905.1 2-methylisocitrate dehydratase, Fe/S-dependent [Bordetella holmesii ATCC 51541]
MNHSYRKPLPGTRLDYFDARAAVEAISCGAYDGLPYTSRVLAENLVRRCDPALLTDALRQLIERRRDLDFPWYPARVVCH
DILGQTALVDLAGLRDAIADKGGDPAKVNPVVPVQLIVDHSLAVEYDGNDPDAFAKNRAVEDRRNEDRFHFIDWTKQAFR
NIDIVPPGNGIMHQINLERMSPVIYTQDGVAYPDTLVGTDSHTSHVDALGVIAIGVGGLEAENVMLGRASWMRLPDIVGV
QLTGRPEPSITATDVVLTLTEFLRKEKVVGAYLEFYGEGAAALTLGDRATISNMAPEYGATAAMFAIDQQTIAYLRLTGR
EESQIDLVETYAKTTGLWADSLVNARYERVLQFDLSTVVRTLAGPSNPHRRLPVSALAEQGIAGKVEQTPGQMPDGAVII
AAITSCTNTSNPRNVIAAGLLARNANRAGLTRQPWVKSSLAPGSKTVALYLEEAGLLSELEQLGFGVVAFACTTCNGMSG
ALDPVIQQEIIDRDLYSTAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTIRFDIERDVLGLDAQGREIRLADIWP
SDAEIDAVVNAAVKPEQFRQVYAPMFDILDDRKTAVDPLYPWRAASTYIRRPPYWEGALAGDRTLQGMRAIAVLGDNITT
DHLSPSNAIMGDSAAGEYLAKMGLPEEDYNSYATHRGDHLTAQRATFANPKLFNEMVRNDDGSVRQGSLARVEPQGQIMR
MWEAIETYMERKQPLIIVAGADYGQGSSRDWAAKGVRLAGVETIVAEGFERIHRTNLIGMGVLPLEFKPGVNRNTLELDG
SETYDVVGQRKPRADLTLVIHRRGGQRLEVAVTCRLDTAEEVSIYEAGGVLQRFAQDFLEASSAAEGRQAS
>AHV91906.1 preprotein translocase, SecG subunit [Bordetella holmesii ATCC 51541]
MSLMLTILLVVQVISALTIIALVLLQQGKGADMGSSFGSGSAGSLFGATGAANFMSRSTKWAAVVFFATTAGLAYMSHKG
SSGPTVESGVMQTFQDRSVPQAPGTPATGGAASVPQAPAAAPSVPSAPADVPQTPAAPAPAESK
>AHV91907.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSCCRHRLNTSIVEGINNTIKVIKRRAYGYRDQKYFFLKIRSA
FPGIPR
>AHV91908.1 TRAP transporter solute receptor, DctP family protein [Bordetella holmesii ATCC 51541]
MHKSWLVAGLVSACAFAVTLPAAAENTLKMAYALSTNSHYGAGADAMAKSLEGSTQGKYKVQQFANSALGGEREVIEGLQ
IGTVDLAIVSTGATLNFVPETGVFDIPFLLRDLPHARAVLDSKVGQDMLAKFPNRGIVALAWGEQGFRHLTNNIRPVKTP
ADAKGLKIRTTENPIHITAFRQIGILPTPMAWPEVATALQQGTIDGQENPLSVITSAKLSQTQKYLSLTGHVYGPALILM
SANAYNSLSPEDKAKFDEAGKQAGLAMRAYVDNIEKTGAEQLKKEGMQVNDVDRAAFAAAVEPAYPEYYKKFDKKLIEAI
RDTK
>AHV91909.1 dUTP diphosphatase family protein [Bordetella holmesii ATCC 51541]
MRDCLPAYATPGSAGLDLRACIDQALVIEPGATVLVPTGLAIHVADPGYAAVILPRSGLGHKHGIVLGNLVGLIDSDYQG
QLMVSTWNRGQTAFTLEPMERLAQLVIVPVVQVSFNVVETFGDSERGAGGFGSTGRA
>AHV91910.1 hypothetical protein D560_0563 [Bordetella holmesii ATCC 51541]
MVLGTLLFAASLTPSLVPRSPMVQGLLGGFCLAAGYGLGVLMRRAWQMMALPRLSPCWHRRALAVTWAGCLLLAVLTLRW
ALEWQNRLRALMDMPALDSGGPWTVAGLALLTFGVLLLIARLLGWVRRRLTAKLSRYVSGPLAGLAALVLTAVFFWMLGN
GVLVHGLMRSADRLYAGLDALVEPDIAQPQSAGKTGGAGSLLDWERLGRQGRRMIAAGPDAAAIAQATGKAALEPLRVYV
GLNSADTPQACAHLALAELKRIGAFERANLVIATPTGTGWVDPESQEALEYVLHGDVATVSVQYSYLLSWLALLADPEYG
VETARAVFATVYGYWRTLPQDKRPRLYLQGLSLGALNADLSHDLFQVIDAPYDGALWSGPPFDTPTWRAVTQGRNAGSPA
WLPVFGDGSVVRFTSQRNHLDDAAVPWGKYRIVFLQYASDAVTFFDPHALWRRPGWMEAPLGPDVSPDMRWIPVVSFLQL
AFDLVLAVEPPKGHGHVYAFDHYLDAWASLTGPSDWTASSLAALKRYRAARSTPP
>AHV91911.1 phosphoribosyl-ATP pyrophosphatase [Bordetella holmesii ATCC 51541]
MSADVLVRVADTLESRRPENGGDPQTSYVAKLFAKGPDAFLKKIGEEATELVMAAKDGQPERIVSETADLWFHCLVTLAH
YNLRPEDVLAELARREGLSGLEEKARRPAD
>AHV91912.1 hypothetical protein D560_1029 [Bordetella holmesii ATCC 51541]
MLKGKHRSWKLGRVGRAARQRGKPGILTGLGAGGGPAAFCRPPARSRQGTGLARIAAARPQAFAVHLAAYRARYRSRF
>AHV91913.1 class II Aldolase and Adducin N-terminal domain protein [Bordetella holmesii ATCC 51541]
MKQMQNALAQRAPGISDVEWNTRVDLAACYRLIALFGMSDLIYNHITARIPGTRDELLINPYGLMYEEITASSLVRIDIE
GNVLHNADTELGINQAGYVIHSAVHGARHDVGCVIHTHTRAGMAVSAMQCGLLPLTQTSMRFADIAYHDYESVAIDLDER
ARLVADLGQKEAMILRNHGLLVASASIAQAFNSMYWLEMACKAQIDAMHSGVALHTPSQAVIDRTCHLYKPTTRRPFGEM
EWPAMLRLLDRRDPGFRG
>AHV91914.1 hflK protein [Bordetella holmesii ATCC 51541]
MPRITKLFNLNDPGWGRGNNNGSEPPKRPQGNGDGPPDLDEVWRDFNNRLGSLFGRKGGGGNRPNPPRGGGFSGPSPKGA
RIGLGVIALVLVALWLASGFFIVQEGQVAVVTQFGKYKSTAPAGFQWRLPYPIQSQELVNISQLRTFEVGFRGGSRNKVL
PEALMLTTDENIVDMQFVVQYRLRADGAPDYLFKMRDPDEAVRQAAETAMREIVGRKPMDFVLYEGRTEVAGEVQALMQQ
ILDRYSAGIQISTVAIQNVQPPEQVQAAFDDAVKAGQDRERQINEGQAYANQVVPLASGQASRMLEQAEGYRAKVVGDAQ
GNTARFSFILGEYQKAPQIMRDRMYLETMQEIFARSSKVMVDAGKSNNMLYLPLDKIMQQAAQDAGCPGNALSVPGAAQP
AVPSAPTRASTPASSSGSSGSATSNTLPRDRMSR
>AHV91915.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MMNPTSPERIRQDGRLIGQTLLKLALARLVFRAIVLAVIAIVWLLASSWLLGFGKTLAFDGLHSMGQQTVDMLARVNPYF
WWGVVLIWTLIVFFSTRSWLYGSLAAGRAQVVPRDVLAQLRSRLSEEAVDVLRWVWGDREEPFTVGDLQRSRRELRHNRI
GKIALVREQAAILDLPGSTPREPMPESARAGVHQASRPAERERSPQPIIEAPRASAPREPGRSPWRQEDGPREPSLGPDR
>AHV91916.1 putative gamma-glutamyltransferase [Bordetella holmesii ATCC 51541]
MPAVLQLTSFLMDYGMSLEEAFHHPRIDASTDTLIIDPALGELTVAALGGRFPHALARRGVYPFAFACPSGVLRDTQGNE
GCTEIMAPWGDAALAENHGRRP
>AHV91917.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MSTKLLANQTHLNVDSELLGLKHKIGAGVELSEETFRLQTSSYNLNKHYPASGYPIANPPGYWSGPRVRSNTNLLRNSLV
TRALYLTDSVALSPDWDLGLGLRHDWIDVRGRSQPEGGSATRNLSKTRAFSGRAAVTYKPADNGRIYLSYGSSFNPSSEP
AVTTGRGLAAATNDLAPERNNSLELGTKWDVLDRQLALTAALFQTTKQNARERQSDGSNTLTGKQQVRGLELGATGRLTP
QWDIYAGYTYLHSRTLKSAVKPEQEGLPLGNTPNHSLSVWTTYSWPSGWKAGYGIRTIGKRPVSSAGGGDIPGYAVHSLM
VAYTVNANLSLQLNVDNLTNKAYIEKVRQNPGAQARSSQVELGDGRSAILTALWRY
>AHV91918.1 ribosomal protein L1 [Bordetella holmesii ATCC 51541]
MAKLSKRAAGIAQKIDRTKLYPVAEALNLVKETATAKFDESIDVAVQLGIDPKKSDQLVRGSVVLPAGTGKTVRVAVFAQ
GDKAEAARAAGADIVGLDDLAEQIKAGQMDFDIVIASPDTMRVVGALGQILGPRGLMPNPKVGTVTPDVSTAVKNAKAGQ
VQYRTDKAGIIHATIGRASFGVEQLQSNLAALVDALQKARPAAAKGIYLRKLAVSSTMGGGARVEIASLSAN
>AHV91919.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MNRKYLIGIAVVVLLAVPALLDDPFVTHLSIRAATYAIVVMGLTLFVGCTGQISLGHAAYFGLAAYVSGMLAKAGVPYIL
AALGATAATGLVGALVGLVVLRTSGHYLALASIAVAIIIQTLIKNASITGGPSGLTAVPPASFFGIELNGGLAYYYYVLA
IVGLGLLILHRVVASRTGDALQAIANNELAAQSLGIPVFRYKVLSFTISVMFAAFAGTLLVHYDGFVDPERLGTHVSILF
LIMAFVGGIGSLPGALLGAFSLTIMEEYTQEFGEYNVLIYGLTLAVVILFMPKGLISLVHRLSAREGK
>AHV91920.1 hypothetical protein D560_1170 [Bordetella holmesii ATCC 51541]
MFIFQGRDGDHLRLGGFLVSPLEIEQFIEAVPGVAGAQVVGAQWQGKTVAVAFVWRQATAQTDERAIIDACKASMAKFKV
PHRVIFVEDFPVVQSANSNKVQKHVLRQQAQSTLDGHPPPT
>AHV91921.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MFDNHAPDVVTFTAWQMLIGALAMAPVALLVPQIDAVWGWELIAGMAYIILVATALAWVMWLLVVRRVPASIAGLSALGV
PVVAVLLAWWILHERPTLNDLAGMLFIMVGIGVVSRARPRKA
>AHV91922.1 aldehyde dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MNLHDTAYWHARAASLTISGQAYIDGSYCNAADGATFAAHSPIDGRLLANIAACGQADVDRAVAAARRSFEAGVWANLAP
RERKARLLRLAALIEQDSETLALLETLDMGKPIRDALSFDLPETARCYAWYGEAIDKQYDEIAPTGPDVLATITREPLGV
VAAVVPWNYPLMMAAWKLAPALAAGNSVVLKPAEQASLSALRLAGLTEEEGIPPGSSTSCRDWVQSRASAGSP
>AHV91923.1 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Bordetella holmesii ATCC 51541]
MKTRLFSSPLSILATVLLAWLLIMAVPALVEWAFIKADFTASSAQECRASGGACWAFIVEKHRLILFGTYPYDEQWRPLI
ASLILIAVIIISGMRRFWRPALALVWIVGLTLVAVLMWGGVLGLTYVENSRWGGLPLTLILSTFGIAFAFPIGVLLALGR
RSHMPAIKTLCVVYIELIRGVPLISLLFMSSVMLPLFLPEGFSIDKLLRAQIAIIMFAAAYIAETVRGGLQAIPKGQYEG
ANSLGLSYWQKMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDLTLAAKAALSDAAWRGFSVEAYIFISLIYFV
FCFSMSKYSQRLERRLATGHQR
>AHV91924.1 putative monooxygenase [Bordetella holmesii ATCC 51541]
MRDVVAHVLPELKRRGIFRGAYPGKTLRENLGLQRPPNIHLRGNLR
>AHV91925.1 long-chain-fatty-acid--CoA ligase [Bordetella holmesii ATCC 51541]
MERIWLRNYPQGVPADIQATGTLLDVLEEAFERFADKTAYMSMGAELRYGDVERLSRNLANWLRAQGLAPGDRVAVMMPN
MLQYPLAAFGILRAGCVVVNCNPLYTARELRHQLADSGARAIIIAENFAATLQAVLPDTKIKHIVVTSVGDMLRPFKARL
VNFMLRRVRKLVPAWTLPGHTTWHSALHLGSQHVYERPDVAGADLAFLQYTGGTTGTAKAAMLSHLNMVANLNQAHAWIR
PLATEGKECVVTALPLYHIFALTANCLTFLKLGARNLLILNPRDIRAMVRELRRHPFTCFTGVNTLFYALLDSKDFRALD
FSPLRLTLGGCMAVQKTVAERWREVTGKPLAQAYGLTEASPAVALNPLDQKDFNGSVGLPVPATDISIRDEHGQEIAPGQ
SGEICVRGPQVMSGYWQQAAETARAFYPQGFLRTGDMGYVDPEGYLFLVDRKKDLILVSGFNVYPSEVEEVAATCPGIRE
AAAVGWPDERSGEAVKLFVIATDPALTEKSVIDYCRRYLTGYKVPRHVVFRNELPRSNVGKILRRKLREESLAQ
>AHV91926.1 inositol monophosphatase family protein [Bordetella holmesii ATCC 51541]
MSRTLTRDDLRRIMAILAEATQVEILPRFRNLPVQAVRGKTSPRDLVTDADEGAERLICARLAKMFPGAVLIGEEASTLN
PALLNMLVDADLAFLIDPIDGTRNYVAGLPLFGMMVAACHKGDVMAGIIYDPINRDAAMAIRGEGAWFEHENGSQEVMKV
AQPAPTEDMDGIIATGSLPASLRQKVNGNLAQLASTAYLRCAAHEYRMAASGHVHLLFYNKLMPWDHAAGWLLHREAGGY
SAHFDGSPYKPTHRSGGLLYAPDAGSWHAAHHLLFGSDEPLLDHPATTPAG
>AHV91927.1 putative coenzyme A transferase [Bordetella holmesii ATCC 51541]
MDLDRIRHAGLRSRVTTAQAAVELIQNGMTVGMSGFTRAGDCKAVPAALAERAGQFPLQITLITGASLGHDTDKRLADAG
VLSRRLPFQVDSTLRRKINQGDVRFIDQHLSETVEQLRSGHIGPIDVAIIEAAAITEDGSIIPTMSVGNSASFAEQAAVV
IVEINQSVPVEIEGLHDIYVPAAHGQRQPLPLIAADQRIGKSAIAVDPAKIAAIVFTDAPDSPSNALPADEETALIAGHI
VRFLEGEVAAGLLTRSLFPLQAGIGTIANAVLQGFEQADFEGLTMYSEVLQDSAISLLDSGKLAFASASSITVSQPVYEK
LLNNLDDYRDRLVLRPQEISNAPEIVRRLGLIAINTALEFDIYGNVNSTHVGGTHMMNGIGGSGDFARNAHLAIFVSKSV
AKDGEVSSVVPMVPHVDHNEHDVDILVTECGLADLRGLSPRERAQAVIANCVHPTYRAALQDYYDRACERGGQTPHLLEE
AFSWHQRYNESESMRLPEPANRRAA
>AHV91928.1 cytochrome c oxidase subunit III family protein [Bordetella holmesii ATCC 51541]
MGASHSAQGKDAPYYYVPADSGHPVRTALALLVVGMGAAAWVNGVGWGKWAVLAGFLGVVTVLYFWFGDAIAESESGLFS
KRVDLSYRWGMGWFIFSEVMFFAGFFGALWYVRTITTPWLGDMDHRLMLWPDFQAVWPNFGPAGVVEHFQTVGPFWLPTI
NTALLLTSGVTLTISHHALRADHRRTAVCWLAATVLLGFVFVICQAYEYHHAYTELNLKFNSGAYGSLFYMLTGFHGFHV
ILGATMLTVILVRLCRGHFTANHHFGFEGAAWYWHFVDVVWLGLYLFVYWF
>AHV91929.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELRQLRYFIRIVELGSMSRAALELDMVQSALSQQISRLEGELGARLLKRNPRGVEPTEAGTAFFREARLTLRHAEQAKR
SAQQPRLTGTVSIGLPATTESMLGLPLIAAVRSRLPDVRLHMVGGMSGMLADMLNARALDMAILFDQRGRQSVFSGRDWS
VRALFEEELFLIRARRRQGPALPAHVRLTDLDGEPLILPTAGHGLRAVLDAAFARAQIQPRIALDVDSQPMTMAALAAGL
GAVIQPWAVMGSVKDAAQRFEWARIQDEDALRINVLCSLNEDTLSPAALTARTVMAECIRQLIADGVWQGTRLIHHKN
>AHV91930.1 hypothetical protein D560_3843 [Bordetella holmesii ATCC 51541]
MAELKQAAELIPNQAMLINTIPLLEAKDSSEIENIVTTTDQLFQYAQGHDNADPATKEALRYRTALHQGFQSLKARPLCT
TTAVDVCRTLKGVDMDIRHTPGTQLANDRTGEVVYTPPEGEARLRDMLANWERFLHNQVDLDPLIRMAVGHYQFEAIHPF
TDGNGRTGRVINILYLIQEELLNLPILYLSRHVIAHKADYYRLLLSVTRDGAWEPWLLFMLQAVADTSKWTTGKIAAIRG
LAEHTTEYVRTRLPKIYTRELVDVIFEQPYCRIGNLVEKGIAQRQAASRYLHDLASLGVLREMQVGKEKLFIHPKLMQLI
SRDNNDFQPYA
>AHV91931.1 hypothetical protein D560_0693 [Bordetella holmesii ATCC 51541]
MAYDLEEQEKLDALKAWWSRYGTLLLSVATVVVVVWGGWSGWKAYQTYRANQAMGYFEALEDAARLGGTDSAARIKAAVN
TLRTDYPHTGYAGRGVLIAANALAEQKDVDGARQQLEWLAAQDKQPALQPVARLRLAGLLLEQKQYDAALGQLNNPPAAF
AALFADRRGDILAAQGKREQARAAWQQAIDGLGTNNPLTQVVQLKLDALTGA
>AHV91932.1 bacterial Cytochrome Ubiquinol Oxidase family protein [Bordetella holmesii ATCC 51541]
MNIAPLQLARTQFTASLSFLALFLAFSMALAWILLFFKLRARSGQPGWLAAYRFWVRIFALSFVLALVSAMPVLVQLASL
WPGLMDKIGNVAGPLLGFGVLSVFILKSCFLGVMLFGQRQVSDLAHTLAVLMVAIGQVVAVGWAVSLQSWLQTPDGAAIV
DGRYQVYDWVRVIFNPSFGWRMGLTVLGAMLAAAFLIMGVTALQALRRPLVGGERHAYKTALVIALAAALLQAPAAWGLG
EVVARLQPAKAAALAGYWHSGTTPELVILGVPDTAAQRNQSALTLSNSGGRWLAQDADAEYIGLDKFSGMSPPVAMVFLA
LRALWLLGAMMFVAALFSFCLSFRRGYDPAAMPRWWLRMLTGMMFAGGVSVVLGVWVAQIGLQPYIVNRTITQSEVLSAV
SASTLWWGLAGYGALYALLLSAFIGMLFHAARYGVVPVRKIGGKS
>AHV91933.1 hypothetical protein D560_2330 [Bordetella holmesii ATCC 51541]
MPAPYTDPGIPTLTERLDEPHPASQDEPPDPASDPVLRALLQAELEQAIDQAANQAAADMRARLEAELPGIVERAMQRLR
PG
>AHV91934.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MRPRELRQLQGNRIAMIFQDPMMTLNPVLRVDAQMIEAVRAHTRVSHAQARERARETLGMMGIPSPEERLLAYPHQLSGG
MRQRVAIAIAMLHRPDLIIADEPTTALDATIQAQILSEVQKLARQHGTSLIWITHDLSVVAGLADEVAVMYAGRIVEHGP
VDAVLDTPMHPYTAGLISSLPSNNVRGQRLRQIPGMTPNLLSLPEGCAFASRCERVSTACGQRPPLSAPVTQRLVRCFHP
ALEIAA
>AHV91935.1 putative SPOUT methyltransferase family protein [Bordetella holmesii ATCC 51541]
MPDWVQTAWDDYAKRLPADCALELREIKPEPRTSGKTPAQMMAAEARRIEAALPAGSLRIALDERGRDLATIALSQQLEK
WRGGGRDVAFLVGGPDGLDASLKASCDGLIRLSSLTLPHPMVRVLLAEQLYRAWAIMTNHPYHRA
>AHV91936.1 taurine catabolism dioxygenase TauD, TfdA family protein [Bordetella holmesii ATCC 51541]
MSVSFRPLSPGFGLAAEGVNLSEPLDAADARAIRQAWLDANGVLVFRNQQLSPEQHVAFSANFGEVYVGGATNNQALAHY
YLPGHPAIFRVSNKKIDGKPAGREDAGTYWHSDASWQANPPRGWLLYALEIPSVGGDTMFCDMYRAFESLSAPIRQMLEG
LQAEHSLAAAVMRTSYAKEFAGRLDEAAAKRAVHPVVKVHPQSGRKALFVNPGFTSHIIGMGASESAAILEMLFEHAISS
ENVYRHTWHLHDLVMWDNRCNLHYAVANYKAHGDRYMHRTTVKDPAIA
>AHV91937.1 sodium:solute symporter family protein [Bordetella holmesii ATCC 51541]
MPFTGNTPQEFEQRLRRIYTLYTLGFILLVLLLALAELMGMARSWIGYVFLLVTVSLYACIGIVCRTSDQVEYYVAGRRV
PAFYNGMATAADWMSVASFIGVAGTLYLTGYGGLAYIMGWTGGYVLVALLLAPYLRKFGQYTIPDYLGARYGGKLPRLAG
VFCAILCSFTYLVAQIYGVGIITTRLTGISFELGIFVALGGMLVCSFLGGMRAVTWTQVGQYIILVIAYLVPVVWLSVKH
TGMPVPQLSAGTVLQEITEKEAYLAHDPGERAVRQLWRSRADEMDERLRALPDSLAHEKDRLRGRLAQLNASDAPMVEIR
SLERELASYPATVEEARTLWSQARAAFEARATPPVPHAEPFPAEDPRERENMRINFLALVLCLMLGTAGMPHILMRSYTT
PSVGEARRSVCWSLLFILLLYFMAPALALLVKYEVYTQVVGTSFLSLPSWVHAWSAVDIHLLDVLDVNRDGIVQLGEISM
GADVVVLAMPEIGGLPYVVSGLVAAGGLAAALSTADGLLLTLSNSLSHDTWYRVVSPRMSAGRRVMVSKILLLLVAFGAA
WVAARKPADILFMVSAAFSFAASSFFPALVMGVFWRRANKWGATLGMFAGLAATFAYMAHTHPWLREWVFGVTRAEPVDL
WWGIQPVAAGVFGAPMAFLTIIVVSLLTPRPDSATEALVDYLREPGGR
>AHV91938.1 patatin-like phospholipase family protein [Bordetella holmesii ATCC 51541]
MPTLRVDATVRSRATGLVLTGGGARAAYQVGVLAAVLQVLDPHCRPGFPNPFQIICGTSAGAVNAAALACRADRPHLALR
RMRRLWSSLDTSMVYRADTPSLIRTGVRWLGLLSLGWMYAGVMRKRPQSPLDSQPLADLLERLLNFRRMRYNLAHGHLSA
LAITASGYTSGEHLTFYQSDRPIEPWHRSLRRAVPSAIDVDHVMASAAIPFVFPARAVNVQGQTEWCGDGSMRQLAPISP
AIHLGADRVLVIGTNFQDETHPEKRSQTPPYPSLAQVGGHALSSIFLDGLSTDLERLSGINRLLAHSPPGVVPGMRPVDV
LAITPSQSLDQLALEHLDAMPAEVRTLFRVLGVSSVPGRSGGGSLMSYLLFEGAYTERLIELGYADTMRRSEEVVKFFEE
AQA
>AHV91939.1 hsp20/alpha crystallin family protein [Bordetella holmesii ATCC 51541]
MKSRDFSSWIWGDALALMHHAERMQRQVLQSVQAAAHAWEPPVDIVESDSAVLVIVALPGVSADDVVVRFDPEGITVTGL
RPIPTNYTHRIHQLEIPYGQFQRRIRLPLHALEPVTPRLADGCLFLTLNKLREIP
>AHV91940.1 selenide, water dikinase [Bordetella holmesii ATCC 51541]
MSTDTVPRLTSLSHGGGCGCKIAPGVLSELLARFVPQRNDPNLLVGTETSDDAAVYRLNDQQALIATTDFFMPIVDNPFD
FGRIAATNALSDIYAMGGTPIMALAIVGMPINVLPHGVIADILRGGESVCQEAGIMIAGGHSIDSVEPIYGLAAMGLVHP
DRIKRNADARAGDVLILGKPLGVGVLSAALKKNLLDEVGYAAMIAATTQLNRPGPDLGALPGVHAITDVTGFGLLGHALE
MVRGAGLTARLRLADLPWMPGVRALAANGVVTGASGRNWASYGGSVHLGSSITDSDRALLTDPQTSGGLLVSCAPSAAAR
VLEVFAAGGFAQAAIIGEMAAGEGRVEVV
>AHV91941.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MLQAPSGQNDLPPGTTPDTESVSASVLAPLRRSAFRTIWIANLFANLGIWAQSVAAAWIVTTEQSSPVLVAMIQVAAALP
LVVLSILTGVIADNYDRRKVMLVGMTMELIIGLVITTLAFLGMLHPLSLIVAVFFMSVGSAIVTPAWQAAVGEQVPKPEV
SRAILLNSVNFNVARALGPALGGLLLGLFGAPWVFLFNCVCYASLIWAIWIWRRELPKRSLPPERILEGVVAAWRFTEFS
SVTRQVMLRSFSFGISASALWALLPLLAHDHTSGSASLYGYMLGALGLGAIGGSVWISAAQRRLGTGRLISAGALLMAAS
LLLLGTVDSLVLVFPALLVAGSCWIAVLATYNTSIQVLVPDWVKARALALYQMSMFGGLALGAFTWGHFAETLGVKGSLA
AAGITLTLTALLFFRSRLPSLNDTQDLAAWPSASQPPSQQDFNPQRGAIIIQVHYQIEASGQSGFLSSLRALRRMRMRNG
ADQWQVFRDLNHLALWTEVFVVDNWFQYLRMMDRMTLADKIVLEAVQAFHTGPQPPQVTQAVSYLAIRSRVEVNDPPQQD
LRAGT
>AHV91942.1 na+ symporter family protein [Bordetella holmesii ATCC 51541]
MTAQAAVPAPQVPKKSSIPIGLVAGIIALILVLLIPTPAELPVAGHRMLAILAFAVVVWVTEAVSYEASAIMVTTLMAFL
LGTAPSIKNPEVLIGTSAAITMALQGFANSALALVAGALFIAAAMTFTGLDRRIALVTLSKIGTTTRRIMIGAIAVTIVL
SLVVPSATARSAAVVPIMMGVIAAFGVNKRSNIAAGIMIIVAQATSIWNVGIQTAAAQNLLTVGFMEKMLGQRVSWAEWL
IAGTPWSIIMSAVLIFVVLKMLPPESDEIAGGKEAVERELQELGPMTAPQKRLLAVSILLLVCWSTEKILHNFDTTSTTY
FGLVLLMLPRFGVMTWKDVQSRIPWGTVIVFGVGISLGSALLSTQAGQWLGNQVVTHTGLDHVSPLAIFAILSAFLILIH
LGFASATALTSAMLPILISVRQTLPGDFNRLGMTMLLGFVVSYGFILPINAPQNMVCLGTETFTAKQFAKVGIIVTVVGY
GLMLLMGATYWRWLGVL
>AHV91943.1 DNA mismatch repair protein MutS [Bordetella holmesii ATCC 51541]
MMQQYLRLKAEAGSLLLFYRMGDFYEMFYEDAEKAARLLNVTLTKRGTSNGAPIPMAGVPVHAMEQYLARLVALGESVAI
CEQIGDPAASKGPVERKIVRIVTPGTLTDDALLPAKADRALAAVCISGKRDPRAGIAWLNLASGEFHVTECAPALLDSEL
HRIGPAELIYADSAELDTSYGGARARVPDWHFEADGARAHLLAHFQTDSLAGFDIEDMPVAVCAAGALLRYAARTQSQAL
AHVQTISAERAGLYVLMDPVTRRNLELTQTLSGEDAPTLFSLLDDCCTPMGSRLLRRWLHHPLRENAPVAARQQAIATLL
TARLDMAQTFGAAGLLDALRSALGVFPDIERIAARLALRSVRPRELASLRDALGTLPQLRMLVAPLAESARLAELADQLT
LDPAIADLLMRAIAQEPSLALRDGGVIATGFDSELDQLRVLAADSGEFLLQLEARERERTGISNLRVEFNRVHGFYIEVS
KGQADKVPTDYRRRQTLKNAERYITPELKSWEDKVLSAQDRAFAREKWLFEQVLDALAGYVRPLADAAAALAELDALGSL
AEHARRHDWVAPDLIETAEIDIDAGRHPVVERTIERFTPNHCRLDATRRMLLITGPNMGGKSTYMRQIALIALLARTGSF
VPARRARVGRIDRIFTRIGAADDLAGSRSTFMMEMTEAAAILAASTPHSLVLMDEIGRGTSTYDGLALAWAIALRLVTHN
RALTLFATHYFELTRLPSEQPAAANVHLAAAESAGGIVFLHEVREGPASRSYGIQVAQRAGIPAAVIRHATRELERLEAQ
GAPTPQLGLFSAALDADAHHQAQADRDEDDAVRAALHAALTDIDPDSLTPREALDALYRLKALQ
>AHV91944.1 D-amino acid dehydrogenase small subunit domain protein [Bordetella holmesii ATCC 51541]
MPEAAVDPQGQRCVLLKHPFERLGRNARAAQGVEYPGETWPALA
>AHV91945.1 EAL domain protein [Bordetella holmesii ATCC 51541]
MPAVSVNLSPTSFHNPELPRLICETLRRHGLAPADLTLELTESILLDTHPSTMQTISQVHALGIRLSMDDFGTGYSSLSY
LRRLPVSELKLDRSFVADLDHDAAASALSAAILGIGESLHLTVVAEGVETSRQNALLHQQGYPVAQGHLFSRPLPASELE
AWFARDLPSVLPLPRTGR
>AHV91946.1 queuine synthase [Bordetella holmesii ATCC 51541]
MPLTDAPLGHNVAYPSEYDASLLFPIPRSDNRAALGLDRMQALPGSALPFHGTDIWNAYELSWLDAKGKPRIAMASFRLP
ANSPNIIESKSFKLYLNSFNQTRLSNAQALRERLETDLSAAAGSPIEMDFILPQRFDELRIAELGGTNLDKQDVEIEHYE
PRPELLRCSVGDVVQETLVSRLLKSNCPVTGQPDWGSVQITYRGRPMDHAALLKYIVSFRQHAEFHEHCAERIFCDLMRA
CEPEELTVYARYTRRGGLDINPWRSNIPGGAPVDTRTARQ
>AHV91947.1 GMP synthase, glutamine-hydrolyzing [Bordetella holmesii ATCC 51541]
MHQRILILDYGSQVTQLIARRVREAGVYSEIHPGDVDDAFVREQAAQGLKGIILSGSHASAYEEGSMRVPASVFEQGLPV
LGICYGMQAMAQQLGGKVSFSDHREFGYAEVSAHGSTKLLAGLADFQDDAGQDRFKVWMSHGDKVTELPPGFSLMASTPS
CPIAGMADEARGYYAVQFHPEVTHTVQGKAMISRFVREICGCEGDWNMPDYISEAVARIREQVGSDEVILGLSGGVDSSV
AAALIHRAIGDKLTCVFVDHGLLRLNEGQQVMQTFADNMGVKIIHVDATDQFMGKLAGVADPEAKRKIIGREFVEVFQVE
AGKLKGAKWLAQGTIYPDVIESAGAKTGKAAAIKSHHNVGGLPDTLNLQLLEPLRELFKDEVRELGVALGLPPQMVYRHP
FPGPGLGVRILGEVKHEYAELLRRADAIFIEELRNTKDPASDLSWYDLTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAV
QTFDFMTADWAPLPHPLLARVSSRIINEVRGINRVVYDVSSKPPATIEWE
>AHV91948.1 acetyltransferase domain protein [Bordetella holmesii ATCC 51541]
MLRALIERARLQQVHVLVGGIDATNAGSVALHRKLGFLHAGTITQAGFKFGRWLDLAFYQLTLDTPLRPVDG
>AHV91949.1 cytochrome o ubiquinol oxidase subunit IV [Bordetella holmesii ATCC 51541]
MTTRTTHRGHDDDDDHHEQTAHGTLKSYATGFILASILTVIPFWIVMARVFESSRNTALVILALAAVQIVVHIVYFLHLD
ARSESGWNMLALIFTLVLVVITLSGSIWIMYHLDANMMPMTTHDWRNVP
>AHV91950.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVEKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91951.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MVARYYRELLSFCLRALRDREAAADVVQESYARFLAVEQSQAVAEPRALLFQTARNVMVDQYRRAQVRGNESLELLDEAQ
MPVAAAVDAPESAVASAQAVAAYLSTIEALPPRCREAFMLHVFDDLPYAQIAARMGTSVSMIEKHIARGRLACRACERQL
QGQIPPG
>AHV91952.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVEKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV91953.1 putative exported protein [Bordetella holmesii ATCC 51541]
MPEQPATREWAVNTVSLFDTNSDPSVQISRDSISMDRARELAADSEVPLPNGPSDVSTLDLQQTALPGIAPPAAPPVQQA
GVTRVNPPVALNTPQTQAPRAPANWQQQLRSELDHCATLGFFERPSCSWAARNKYCAPNRAWGSSADCPRRPE
>AHV91954.1 hypothetical protein D560_3973 [Bordetella holmesii ATCC 51541]
MEIISSQTGEFDSGISLQTTVDGIPFGVYIVLGVPDLDSIADFVPPEALSDGASIHAASVDTVDGAQEQIDEVLENLNPA
DVVVFFCADVDCFAAALDLLGLPIEE
>AHV91955.1 N-formylglutamate amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MSDIFHFEAGTAPLLISIPHLGSLIPETQKPLMTPLGLRSGDTDWHLDCLYAFGKKLGASFLWARYSRYVVDLNRPPNDE
SLYPGQAKTGLCPTQTFDGQPLYLDGRDSIADDEREARRIQYWQPYHDQLRTEIDRLRAQHGKVLLWEGHSIASVIPRLF
DGKLPDLNIGTAAGASAAPGIQEIIERQLATQTDYSWAVNGRFKGATSLATTEIPLATCMRCSWKCANPPTWRSTIPMPG
PRMRQPAWARW
>AHV91956.1 asmA family protein [Bordetella holmesii ATCC 51541]
MKTWFKRILIGLVVVVLVAVVGAAIFLLTFDPNAYKYKLEELVQERYQRTLTIDGEIELSLFPRIGLSVQGVSLSETNSP
ETFASIDSMRLAVAVWPLLSDNLVVDHVTINGFKARIMRDKEGHFNFENLVGDSVQSTVVPANAAEATAGVIAGATQALT
SGTVKAPRSMQIDIAGLGLKDGELQMLDAMSGMAVSVTQLNANTGRVTFNQPFDVSLTARVEGGDPRFDANLTGQALLRL
DPAAKRYSAQRLDLRMDGKIPSAQAKSLVMRGNLAFNGATSSLDVAGLELLFQGDVAHASTKLTGVEASLAVPKLSLDPH
KTQLQVEKLAMRAKGAAADGPFEFALDTPSLHVSPTSAGGDALTGRVRTQTVDASFGLTGISGNASELDIKEAKVNGSFK
QGERVVKTTLASPVSLQLLPRVIGLAALKGDVNITDPALPKGSLQIPLIGSVSADLLKDLASAKINAVLEGGKFDLTADV
TQLSTQPQLKFALAVDTLDLDKLVPPVGAAPAKTPNDGKQDESKPAAKPAVAAKPADDSLNLSGLVGPTANGSIKVGQLV
MRGLKAAQVGANVKLEKGKLDISSLAADLYNGKLVGSLSVNAAEGNQMAAKLNLTGIAIEPLLVDVAKQDVLSGTGSLAL
DLSTAGANTYALTNNLAGTVQARLRNGAVKGINLSQTLRDLKAVVSQSQEMSFGADNSRQTTFGAMDGDMTLAKGVGTVK
RLDIATDYLRVTQGSPATIDFVNSTINVVAIARVVNTSNEGKDLADLRNLPVPVLISGTFDKPVYTVQWREIAGSLLKRG
VESKIKDALGGKSGKNEVGKALKGILGK
>AHV91957.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MSESFVLVETRGRVGLLTLNRPKALNALNDQLMDELGAALLAFDADADIGAIVITGSEKAFAAGADIGAMKDWSYMDVYG
SEYITRNWETLKRIRKPVIAAVAGYALGGGCELAMMCDIVIAADSARFGQPEIKLGVIPGAGGTQRLTRAVGKSKAMDLV
LTARMMHADEAERSGLVSRVVAADKLLEEALDAATIIASMSLPSVMMAKECVNRAFEVSLNEGLLFERRVFHSLFASDDQ
KEGMAAFTEKRKPDFKHR
>AHV91958.1 phenylacetic acid degradation B family protein [Bordetella holmesii ATCC 51541]
MSKQWPLWEVFIRSQHGLAHKHVGSLHAPDAEMAINNARDVYTRRNEGLSIWVVRASDIAASSPGDKEPLFEPANSKVYR
HPTFFPMPEEIKHM
>AHV91959.1 fecR family protein [Bordetella holmesii ATCC 51541]
MTPLSNPDRRDLDAEALDWFVRCGEQPTAELRAWLDADPAHRQAYERWTREWSQLDALPSAGVDGLRRQLAADKRQADKP
RARGRAFWLAALSRWTPAISALMVGGMAYLAWSQWHTPPALYAETFVTARGEQRDVTLPDGSLLRLDTATRVEVKLYEKR
RVVSIPDGQAVFQVQGDATRPFDVLAGPLKITVVGTRFSVRHTVGVPGDDGVRVAVDEGKVKVARAEGWGAYFAAAEVLT
PGQQLSASADGDMAPVTPVASAGIAPWRDGMVSFNNTPLSQALAEFERYGATGLHVRNAAVGALRLTGTFDPRNLGNFKR
NLPKVLPVQLLPQGDVMEIAPLS
>AHV91960.1 hypothetical protein D560_1259 [Bordetella holmesii ATCC 51541]
MSSREDPTEPAPSGVFAATDSPCVAVCSTLFDDICRGCGRTAMEVANWVFMTEEEKRDVWVRIRAQGYPRRNN
>AHV91961.1 acyl-CoA transferases/carnitine dehydratase domain protein [Bordetella holmesii ATCC 51541]
MSALKGMKVLELGTLIAGPFAARMFGEFGADVIKVETPPDQHGQGGGDPIRSWRHLHEGNSLWWTVQARNKQSISL
>AHV91962.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MSGFENFWAIYGNLVLTLGTNALLALSIWLTLACGMLAMANAAFMGIGAYAAALLTMNYDASFPGALAGGMLAPAVVAAL
IGLPTLRLSGVYLAMATLGFGEVVRVTILNTESVTGGALGLNGIPQLTQWWHVVLSLVIVLLVLWRMRRSKIGRAFDAIR
GDETAAGLMGIDVRANKMLAFVLGAMIAGLAGGLNAHLTFFIGPNEYGFDRGVEILTMAILGGIGSLAGPVLGSTIVTVL
PELLRGFADFRLVINGVILVVIVLFLPQGIWDPARFKRWLRQGGKRHA
>AHV91963.1 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MNAPLTPAQRAALQSVHLDDKYTLQTGRAWMSGIHALVRLPMMQRERDVRAGLNTAGFISGYRGSPLGGVDQNMWKAAKY
LKEHHIEFQPGINEDLAATAVWGSQQVNLFPGAKYDGVFGMWYGKGPGVDRCGDVFKHANAAGTSRHGGVLVVAGDDHPA
KSSTLPHQSDHILKACMIPALFPSSVQEVLDFGLHGWAMSRYAGVWVGLKTITDIVEVSASVDIDSDRVSIVLPQDFILP
PDGLNIRLPDTPLQQEARLLDYKLYAALAYARANKLNRELWSVPQDRARFGIITSGKAYLDTRQALSDLGLSEQACQRIG
LRLFKVGMVWPLEATGVQQFAEGLDEILVVEEKRQVIEYQLKEELFSWIGTGKKIPRVVGKFDDKDGGEWSVPQGNWLLP
AHYEFSPAMVAKAIGARLLRLELPEDVRAGIQARLAFIEERETALSKPRLVVDRKPWFCSGCPHNTSTRLPEGSRGLAGI
GCHYMVTWMGRNTQVFTQMGGEGVPWLGQAPFTEEKHVFANLGDGTYFHSGLLAIRAAVAAKAPITYKILFNDAVAMTGG
SLSTVPSVCP
>AHV91964.1 hypothetical protein D560_1585 [Bordetella holmesii ATCC 51541]
MSARFISAIGAGVGNAIRSVGYFTRFFGAVLARSGIALQRPRLVSQQIHFIGNYSLLIIAVSGMFVGFVLGLQGYYTLNR
YGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRFWGGVIAMPILAA
VFSMVGILGGWVVGVVMIGVDTGAFWSQMQDGVDVWNDVANGVIKSLVFGVTVTLVALYEGWQARPTPEGVARATTRTVV
VGSLAVLGLDFLLTALMFGN
>AHV91965.1 ABC-2 type transporter family protein [Bordetella holmesii ATCC 51541]
MHLSWVDVRTRYRKSVLGPLWLTLGNTIAIVGFSAVWAQLLRVDRAVFVPSLTVGLVLWQYISGCLVSAVTAYTQNATVM
RNLCVPVWFFVVRIQGYNLINLAHNLLLVAAVLVYFGAQPSAGLVWFLPGLLLVIAICALLSLALAALGARYRDVRYAIE
VSLPLLFFVSPVLFRPESLVDEYIWLNPISYLIEMVRTPLLSTLGGPVRPAGWVYEGGLIFLAVMLLVCAAIYWRNPRRI
LFWI
>AHV91966.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV91967.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MTGARKYLAGVLGVAFILLLWQTAAWLLPDFLMPGVPTVLARLYEELGKSSFHQALLGTLARLGAGYGLALVAGIGFGLV
AALLYFFREVLRSAIVILQSIPSIAWVPLFLIVMGFGSTPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGASPW
GLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGKGLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQFVLEN
LKHRLLRYQYV
>AHV91968.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MSASILLKNLRKRYGEHEVLRGIDLEIPAGQTLSIIGPSGSGKSTLLRLLMTLDRPSDGEIEIDGVSMWHDAQGRLADPH
SAHVRQVRSKIGMVFQHFNLFPRMTALGNVMEAPLRVLGLRREEAEARGREYLELVGLGDKLDAHPARLSGGQKQRVGIA
RALAMRPDVMLFDEVTSALDPELVGGILQILSDLSAKKDMTMIIVTHQMKFAERSSDRTLFFDEGNIVEDRPSSELFADP
QQERTRQFLQSVIEAE
>AHV91969.1 type I phosphodiesterase / nucleotide pyrophosphatase family protein [Bordetella holmesii ATCC 51541]
MKGRNIVVIMSDEHNPAFMGCSGHPFIKTPHLDALAARGVRFPNAYTPSPICVPARAAFATGQRVHQTRHWDNAMPYIGD
PSGWGHALQEHGVRVESIGKLHYRNEEDPVGFDAEHIPMHVLGGHGMVWASIRDPYLPSQGRKRMLGERIGIGESPYTAY
DRSVTERTLDWLRNAAAKDRPFALYVGLVAPHFPLIAPQAFYALYDARQIPQAKLHPKQGYERHPWVQAYAEFERSEETF
ADENERVSAFLAYYALCSFLDSNVGRILSELETLGLKDSTHVVYTSDHGDNVGARGLWGKSTLYQESVGIPMLLAGPDVS
PGVCETPVDLLDLYPTILQAVGLDAGPYMDQRPGKSLFALTDSHSIRSAPF
>AHV91970.1 class II Aldolase and Adducin N-terminal domain protein [Bordetella holmesii ATCC 51541]
MPDGRVSIYEPQQPGLIYPQLPEFANVTEERLHLKQRLVAACRAFGKEGFDYGFAGHLTVRDPEHPDLYWTNPMCVHFND
VNVSNLILADHKGRVVEGRHALNRAGFVLHAAVHEAHPDIVAMCHAHTVYGTAFSALGIPLAPISQDAAAFFEDHVVIKS
EAGQVAVEERAGLAVCDWFKGVRAAIHQNHGLLTASRFSIESAAFWFIALERCCRQQLMVEASGHKPALVPPDKSRYSRE
HVGSEYIGWLHFQPIYEHLAATQPDMFE
>AHV91971.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MEIANKVFIVTGGASGLGAGTVRMLVENGGKVVIADLQDEPGQALAKELGQRYVHCDVTQEADGKAAVAAALAIGPLFGL
VNCAGVAPAAKIVGKNGAHPLDLFQKVVSINLIGSFNMMRLAAEAMGQNTPEPTGERGVLINTASVAAFDGQIGQAAYAA
SKAGVAGMTLPIARDLAKTGIRCMTIAPGIFGTPMIFGMPQEVQDSLAASIPFPARLGRPEDYAKLVYSIVTNDMLNGET
IRLDGAIRMPPK
>AHV91972.1 mmgE/PrpD family protein [Bordetella holmesii ATCC 51541]
MSSSFATGLAEVCRFVSALSWDAIPAPVRQRAVEVVCDDLAAMAAGSREPELRRYASLLLALGNAADAALISPALPRVGR
LEAASWNALAGNWCELDEGFRLAICHAGIYTLPALLAEACATRASLRQVLTALTGAYELVTRCAMSFHVMPPPVHGHALW
SAVGAAAAVSLLRGHDAATLQSAVSGAITTASMGPRSHLMSGILIRNGWAAAGSVNGMQCADWAECGFGGGTESMEAVCV
EILGAELREGEITRDLGSRWSLTHGYQKLYSCCQHGHSAVQACIALRETHGLDPQRIRSIHLATHPLALTLDSVHPQTTL
GARFSMPHMVAASLALGNASAQAFSLSTLDDPLISRLREKVQMRLADHPMKPPHDRPAWVDVEMDDGQRYSADCQSAIGS
PDNPVSKEQFQAKLADLAAGILPGLPQAVQPDVWQMALDMETSAWLSSMAA
>AHV91973.1 lipopolysaccharide-assembly family protein [Bordetella holmesii ATCC 51541]
MYVGIPDNTRFGADVRRSIRAVSPETRIVADPKAAAANLQQVSSTRSLRDVALNAQGRVEEYELGLVFTFRLVDSTGRAI
IPDTTFTVYRDLPYDDGVVQAKQSQMEALYESMQQTLLSRLLRRLTAPDVAESMHRLEQTKDDISEDTPLFDPNVRTDQR
QGPALWNTPNITPGRGAQPE
>AHV91974.1 yqey-like family protein [Bordetella holmesii ATCC 51541]
MSTDSLKTTLSDAMKQAMRDKDAARLGTLRFLLAAIKQKEVDERRDVSDAEITAIIEKQVKQRRESIAAFENAGRTQTAD
QEKTELLVLQEFLPQAASAEEVEAAVAAAIADVQAQGVTGPAAMGKIMAILKPALAGRADMSQISQQVKARLA
>AHV91975.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MSTPIFDVAVIGGGLHGLSAALHIARQGKRVVVLERHWTERHASGATAAGVRTLNRDRRELDLSLEALDMWHNMAALVGD
DCGFHAHGQICVAETEQGLAKLAARVATLRAAGYTHEEVIDAAELRRLLPELSPHCVGATMVRRDGAADPHRALRAFRAS
AEAAGVTLVEHCAVTGLRRQGSDWCVVTERGEWVAPAVVNAAGAWSARIATMAGDDIPLDTKSSMMMVSERLRPFIKPVV
AIVGRSLSFKQSDQGTLVIGGGLQGTPNLERETSTARMRVLAKGAHAATDLFPMVRDIRIVRVWAGLEAKTEDLLPVVGP
SPNAPGLFHAFGFSGHGFELVPVVGAVMADLVLRGTTSRPIEALQATRLMGAQP
>AHV91976.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MALACLAAIPLGVTNTYYLHLLETIMIYSILLFGLDIVVGYTGQVSLGHAGLFGIGSYVAGVLVFHLQMPIWITLPAAII
IAAAFGAVLALPALRVTGPYLAMVTLAFGTIIQILINEMTFLTEGPLGIKINKPAFGSHILDKQEYFWLVALLLVLSLVV
VHRILKSHLGRSFEALRDSPIASDCMGVSVYRHKVIAFVISAGFAGLAGALYSYSEQYISPNTYNFELTILFLLAIIMGG
RKTRTGAILGASIIVLLPKMLDDIETFRIIALVVAVLVAGGSALAVARGKADARRVAVPVAGTIALAVFAYWLDAVTDWR
LSIFGVMILFVVYYLPDGIVGFVRNLFFSTRRKALSVSSELAERANAVPTAAAGPVETLLQAQGILMQFGGLKALNQVDL
DVKRGTIHGLIGPNGSGKSTMMNVLTGIYLPTAGSVTFAGRSLVGMTPAEIAANGVARTFQNVQLFGEMTALENVLVGLH
HSFTTGLASVALHTPRWKHEEQKARARALALLEFVGLSDLAGEEARNLPYGKQRLLEIARALALDPQLLLLDEPAAGLTA
PDIAELLVIIRKVRDHGITLILIEHHMDVVMSVCDTVSVLDFGQKIAEGLPAEIQQNAKVIEAYLGGATA
>AHV91977.1 glycine cleavage system H protein [Bordetella holmesii ATCC 51541]
MSLPTDRKYTSSHEWVKAEGDVFVVGITDNAQDQLGDLVFVGDVNVGATLKAGETVGVVESVKAASDIYAPVDGEIVAFN
DELEANPNLINESAFTAWIFKIKPANAADAGKLLDAAGYEAVANG
>AHV91978.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MQVFVEVADRGSLSAAATQLDMSRAMVSRYLAELEEWVGVRLLHRTTRRLSLTPAGAETLPRCRRMLDMVGDMRDAVATP
EAMPRGMLRMSASPSFGNSQLVPVVADFVRRYPGTAVDLLLVDRLVDLVEERVDLAVRITNEVDPNLIARRLADCRSVVC
GSDTYFEHRGVPSRVEDLAFHNCLTHSYHGHGLWRFLREGETVDVSVNGSITANEAQVLMGAALHGAGIALLPTYLAVPE
IVSGRLRSILGDSEPQVLGVYGVYASRRQMPLVLRTMLDFLVERLGHEPWDTLLAGQKM
>AHV91979.1 anhydro-N-acetylmuramic acid kinase [Bordetella holmesii ATCC 51541]
MTPPIDGPSSSLPGRCFIGLMSGTSMDGVDGVLLQLEPGLRLLATASLDMPLDLRGALLALNTSGPDELHRAALAANDLA
RLYAAIVERLLAASGLRPEQVRAIGAHGQTVRHRPDLGYTLQLNAPALLAELSGIDVVADFRSRDVAAGGQGAPLVPPFH
DAMFNRGAPRAVLNLGGIGNVTLLGPGRAPRGFDTGPANVLLDGWCQQHTGQAFDQDGQWAAGGRADAGLLRHLLDSEPW
FALPAPKSTGRDLFGLPWLQRRLDSYTATLAPRDVQATLVALTAQTVAQAVAGDPLQDMLVCGGGARNPSLMAALAQALP
YPVAATDSEGVPGQWVEAMAFAWLARAFVERQPAGVPAVTGARGPRILGALYPAR
>AHV91980.1 chaperone protein DnaK [Bordetella holmesii ATCC 51541]
MSKIIGIDLGTTNSCVAVMDGGQVKIIENAEGARTTPSIVAYMEDGEILVGAPAKRQAVTNPTNTLYAVKRLIGRKFDEK
AVQKDIHLMPYSIVKADNGDAWVEVRGKKQAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRI
AGLEVKRIINEPTAAALAFGLDKAEKGDRKIAVYDLGGGTFDISIIEIADVDGEMQFEVLSTNGDTFLGGEDFDQRIIDY
IIGEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSSSQQTEINLPYITADASGPKHLNLKITRAKLEALVEELIERTIEP
CRVAIKDAGVKVSDIDDVILVGGMTRMPKVQEKVKEFFGRDPRKDVNPDEAVAAGAAIQGSVLSGDRKDVLLLDVTPLSL
GIETLGGVMTKMIQKNTTIPTRFSQTFSTADDNQPAVTIKVFQGEREIAAGNKGLGEFNLEGIPPAPRGMPQIEVTFDID
ANGILHVSAKDKGTGKENKITIKANSGLSEDEIQRMVKDAEANAEEDHRLAELAQARNQADALVHATRKSLTEYGEKLEA
AEKESIEAAIKDLENILKTGDKAEIDAKVEALSTASQKLGEKMYADMQAQQQAQQQQAADNAKPVDDNVVDADFKEVKRD
Q
>AHV91981.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MTALYSQTFVFVFSLFALCFITCTICGLVLFFWKSKRVNSVLKHPLLEHRPFRQYSFSIQAAIFLDYFLRLTFPRAKRWV
AGYANYQLKYVDPKKVPLDVKWPIIGFWGSCWVGLIAMIALWIMLMLGR
>AHV91982.1 hypothetical protein D560_3129 [Bordetella holmesii ATCC 51541]
MAAFARPAARITPAAPLAIACRLGAVIVSGAAPGPKWHRE
>AHV91983.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MIAPGDEVVLVVDSRHARRAVRQLREAEKSVHRVMIAGGGNIGLRLARQLADESYSVRIIERNEKRCEYLAAELPSNVLV
LHGSGTDESLLERENIQDMDTWLALTSDDEDNIMSSLLAKRMGARKVISLINRHAYGELMQGSHIDIAVSPSQATMSELL
RHVRRGDVVAVHRLRQGVAEALEAVAHGDRATSRVVGRRVGDIRLPKGASIGALVREDEILLPDGDTMIESDDHVIVFVP
TRQQMARVEKLFQVSASFF
>AHV91984.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV91985.1 pantoate--beta-alanine ligase [Bordetella holmesii ATCC 51541]
MKVVHTIEDMRDHLRGQNRIAFVPTMGNLHEGHLALMKLARQHGDPVVASIFVNRLQFGPNEDFDRYPRTLQADVEKMER
DRDVYMVFAPDEREMYPEPQSYRVQPPDDLGDILEGEFRPGFFQGVCTVVLKLLSCVQPRVAVFGKKDYQQLMIVRAMCR
QFQLPVEILAHETVRAADGLALSSRNRYLSAQERAEAPRLYAVLGALRQRVLDGASDLATLEQEAVTQLSAHGWNVDYVS
LRRQRDLKAPGAEDFRLREPLVVLAAAKLGATRLIDNLEI
>AHV91986.1 glutaredoxin family protein [Bordetella holmesii ATCC 51541]
MMVLYSGTTCPFSQRCRFVLFEKGMDFEIRDIDLYNKPEDISVMNPYGQVPILIERDLILYESNIINEYIDERFPHPQLM
PADPVMRARTRLFLFNFEKELFIHVSTLEDRSAKPDDKKMVLARQAIRDRLAQLAPLLLKNKYMLGEEFSMLDVAVAPLL
WRLDHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMRR
>AHV91987.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MSRFRIRPAPLAVSIALLFGAATVQAQSADTVEISIPAQPLALALDALARQAKLELMVQPTLIAAKSAPALQGRYTAREA
FERLLAGSGLRAEIEDGLVTIYPVGRGDVTLEPVLVTGLTSLSATTEGTESYTSLVTTIGKGTQSLKDIPQAISVVTRER
MDEQGMTSIYDALANTTGITLQQSPQLGKYVFSRGFRNTWYQYDGVPLERGAYGRASNYTGGTAIYDRVEVLRGASGLLQ
GGGEPSGAVNFVRKRVLAEPGFSVTTTAGMWNRFGTQLDGGGTLNEEDTLRGRAVVDVEKAGSFIDHVNSTNQTYYGTLE
YDITPLTQVSLGLAYEVTDGTPNVRGLPSYSNGKTLDVVRSFSMEPSWNKRHSTTQTTYFDLTHRFNDNWQGKITAVNMR
ERLNMKFASSVAEVDPSNNFGAMYAETTRNDIKIGGIDANLIGKIDAFGLQHELLVGANYARNTIATDYGGLSNYYVGDI
FNIPNLREPSQKRWTTALSNTATARASNTVFTRPPTCNWPSR
>AHV91988.1 putative 3-oxoacyl-[acyl-carrier-(ACP)] synthase [Bordetella holmesii ATCC 51541]
MGVVRLDHVAVRGITSAVPPGRVDNLAVAPDQLAQRERLVRNVGVRWRPCCADGMIFSDLAQHAAQKLIDGLGWDKASID
ALILVTQSPEFSIPATSIILQDRLGLPLGVSAFDINLGCSGYTYGIFNAAAMVGEQRFRRVLVLVGDQAASNDGLDNGRD
ILFGDACTATALEYDPTAQPIYFEGFSDGSGYEAIIIPHGGKRYPTNDSSRQPRLCADGVMRRADDVWLDGPAILTFSTL
RAPEAIRRMLGHVGKDVADIDYYVMHQANRMINNTIRQKVGGSPAQWPSSLEQYGNTSSASIPVTISSQLSAEAQQRPLH
WILCGFGIGLSWGTLYLQTEPFYAPEPFVLEHRYDFQPTRIS
>AHV91989.1 2,3-dimethylmalate lyase [Bordetella holmesii ATCC 51541]
MKPTQKLRLALSAGRTLVAPGAYDGMSARLVADAGFDAVYASGGAIARAAGYPDLGILSFAEVLDRIEKIVEASGLPVVA
DADTGFGGSANVERTVRAFERAGVAGFHIEDQSFPKRCGHLDDKSLVDADEMCLKIRIARQTLSDPDCLVIARTDAIAVE
GFEAALARAERYVQAGADMIFVEAPETLEQIREIARRLPGPKLINMFYGGKTPLVPVEDLSAMGYQLAIIPSDLQRAAIH
AMQKTLAQIRATGDASALAQELTSFKEREEIVQTRRYLALDAL
>AHV91990.1 tatD related DNase family protein [Bordetella holmesii ATCC 51541]
MLIDTHCHLDAAEFDADRLAVARQAYDRGVKTIVIPAVERANFSIVRDLAHGIQGGAYALGIHPLYVGRASQEDLVVLRQ
AVEAAMPDPRFVAIGEIGLDFFVPDIASGEPRMRQEHFYAAQLALAAEFGLPVLLHVRRSQDILLKYLRRQRGSCGGIAH
AFNGSAQQARGFIDLGFALGLGGAMTYARALQIRRHATDTDLDHLVLETDAPDIPPAWLHEPERRNTPGQLPRIAAELAV
IRHCAIDEVARRTTSTARRVLPRLAAIC
>AHV91991.1 glutamate N-acetyltransferase/amino-acid acetyltransferase [Bordetella holmesii ATCC 51541]
MAVNLQIPPESEIFPVAGVEIGVTEAGIRKANRRDLTVMRLAPGATVAGVFTRNRFCAAPVQVSKAHLAKASAIRALVIN
TGNANAGTGEPGLKNAEDTCAELGKLLGVSPDQVLPFSTGVILEPLPMDRLLAGLPKAVAALGPNEWFNAAHGIMTTDTL
PKIFSRRVQIGGKTITITGISKGAGMIRPNMATMLSFLATDAGIVQPLLDTLALDLANQSFNRITIDGDTSTNDSFIVVA
TGQSGLQIDSASDADYAALRQALTEAAADLAQKIVRDAEGATKFMTIRVETAGNTEEALKVAYAVAHSPLVKTAFYASDP
NLGRILAAIGYAGIEDLDASKIQLWLDDVLVAKDGGRNPEYREEDGQRIMKQAEILVRIALGRGQTCDTAYTCDFSHEYV
SINADYRS
>AHV91992.1 DNA-binding response regulator [Bordetella holmesii ATCC 51541]
MRILLIEDEADLAHWLSRSLARHAGFVVDWADNGLLAERRLTLEEFDAVILDLGLPGMDGHTLLTKMRSRDDRTPVLVLT
ARDSLAERVGTLHEGADDFLPKPFVLEELEARLTALIRRSRGREHPRLSLGSLVLDTSAQRFTVSGQNLHLSPKEYAVLR
VLIQRSGEPINKQQILDRIQREDSDVNLEAIEVLVHRLRKKLTGTGVHIVTMRGIGYSLEIAVENS
>AHV91993.1 hypothetical protein D560_2195 [Bordetella holmesii ATCC 51541]
MTAKSWDFRVQRPIGQDGDWRVSYLLVAPDGTEQRIDIQQHYPAAQTAHR
>AHV91994.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MTNPNGIRQRDPATVLITGATGGIGAALAREYAQSGARTLILQGRNEARLQELATEFSAMGVHVETRVLDLRDHEALTRW
LQDVCARNDLDLVVANAGVNIDVGPANAGENWPDVLRLLDVNVRAVFATVHGVLPSMRARRTGQIALISSLAAWRGLPET
PSYSASKAAVKVYGEALRDNLAGEGVRINVVMPGYVESQMCFDMPGPKPFLWGAPKAARVIRLGLRANRSRISFPFPLNL
GCFLLAVIHPAVSGWILRRMGYGA
>AHV91995.1 ankyrin repeat family protein [Bordetella holmesii ATCC 51541]
MLEAAAQGQADRVRTLIAQGAALESRDAQGNTPLLRATDGNHVAAARVLMEAGANVNAQNRMQDSAYLLAGAWGYDDVLR
LTLERGADLKSTNRYGGTALIPACERGHVNTVDILLRAGVDPDHVNRLSWTGLLEAILLSYGGPVIRPSCAV
>AHV91996.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MSLHAAEILHRLASRLKMRHLRLLLLIRQHGSLTRVAQHMATSQPAVTSALAEIESMFGAPLFTRSARGMVPTALGDIAL
ARAQTMLQDLDHLARDMEAAASGHAAHINVGVIPFVSGQLISSAIARALPGGRRLTVTVHEATSDVLLGLLQEHALDAVL
ARAAARPMRDMLQFEVLYRQRPRLVASRRLAARLARGRVDWEDLAGLDWILGTAQTPMRDQVAALFLGQGLAPPKPVVET
NSSKLIGEMVAASERAVSALPADIADELVRIAGVAIVPFSFEWALPPIALFTRKDSQAREVDGLFAQALRDVCRQIYGSA
T
>AHV91997.1 periplasmic binding family protein [Bordetella holmesii ATCC 51541]
MKRLNLKLAAALMAATGALSAIATPAAAAEEQFVPLLVYRTSSFAPLGIPWADGKLDYLKLINERDGGVNGVKIAYEECE
TAYATDRGVECYERLKNKGTGASGFDSQSTGITFAVTDKAMVDKVPVETVGYGLSQSVDGSVFEWNFPLLGTYWTAADVM
IQDIAKKEGGMDKLKGKKIALVYHDSPYGKEPISVLQKRAAKEGFELLLYPVTAPGVEQKSTWLQIRQQRPAYVLLWSAG
IMTPTAIREAQASGYPRDKMYAIWWAGSEGDVKDLGDVAKGYNAITIHNSAGSGKVYDDLKKYVYDKGQGADKSGNTTLG
TIAHTRGMIISMLQVEAIRAAQEKFGKGKALTPEQVRWGFEHLNLTQDRLNELGFGEIMRPVKTSCSNHMGDDWARIVQW
DGKKFNVVSDWYQADKTVVDPLVKEAAAKYAQEKKITPRKCED
>AHV91998.1 sulfite exporter TauE/SafE family protein [Bordetella holmesii ATCC 51541]
MSGLVVVACLASGALIGFMGGVLGIGGGLIAIPALVLLMGMSQQLAQGTALIMVLPTIVMAVRKYNQHARLDVRTAVAGA
AGAVVFTWVGARLALGIASSTLRLTFAVFLFGIALFYLYQTLRQPRPAADGARSAPPAFTQTRAVVLGVVCGTLGGFFGV
GGAVLAVPILTSVFRLPQTSAQALALSMVIPGSTIALITYSWAGKADWWVGVPLAAGSLLFVPVGVRLAYRLPEKRLRAA
FAAMLLVTVALLVFEV
>AHV91999.1 oxygen-independent coproporphyrinogen III oxidase [Bordetella holmesii ATCC 51541]
MTRHHERAARYLAALAREMAMQAALLANKATITQLHFGGGTPTFLSDAELTRLMDDIRRYFHLSSQAEISIEIDPRTVDA
QRLDHLAQLGFNRLSYGVQDFDPAVQQAIHRIQPYESVRDLMLAARDVGFASVNVDLIYGLPRQTAASFARTVEQVNALR
PDRIALYAYAHLPTRFKPQRRIVGEDLPDPATRVALLAGAIKGFMDQGYIYIGMDHFALPADSLARACAQGSLHRNFQGY
TTEPDRDLLGIGVSAISQLGRVYSQNHKDIDAYYEAIDAQVLPVERGLSCSDDDLWRRRIIMDIMCRGHLDLAAASGQDD
PERVFARELPQLRQLQAMGLLQLADGCLTVMEQGWFFVRAIAMVFDAHLRTAATPPGFSRIA
>AHV92000.1 bacterial-like globin family protein [Bordetella holmesii ATCC 51541]
MTTTRVEAVFEPLDTSKTIYELLGGESAVRALVDRFYDLMDLEPEFTALRATHGPSLDEARDKLFWFLCGYFGGPDYYIQ
RFGHPRLRARHLPFSIGQAERDQWVACMGRAMQDQGIAPPLVERLLHSFFGVADWMRNRAG
>AHV92001.1 hypothetical protein D560_0005 [Bordetella holmesii ATCC 51541]
MCMEGKTSRQRFSEEFKVQAVKQVTEGDTRSAMLRHD
>AHV92002.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTHECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV92003.1 fecR family protein [Bordetella holmesii ATCC 51541]
MLRGVVAAAVAGATGWGVYHHTPWQRLIADRSTGLGEVRKIAIAPGLYVTLSSDTAIQISRNADRHLLRLLRGQVQVQAS
AAAVQLDTGVGLARTDRARFCVRRGAHGCELQLLDGGLVLEREMNRTRLSAPQGMWLPDSGVWHQRPPNPDAGLGLTG
>AHV92004.1 hypothetical protein D560_3480 [Bordetella holmesii ATCC 51541]
MWIWFGLAAVALIGEVASGTFYLLLVALGLAAAGLVAWGGLALEWQLLACALIALLGLLVLRRRGVLKKREIDASRNADV
NLDIGQTVSVEAWSATGEARVQYRGASWQAQLAAGQPRQSGLHVITEIQGAVLVLAPKSHPAR
>AHV92005.1 acrB/AcrD/AcrF family protein [Bordetella holmesii ATCC 51541]
MVISEICIRRPVFASVLSLIIILVGLISYSRLTVREYPKIDEPIVSVDTTYKGFIEEYRGMQTGS
>AHV92006.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MPLDAVITLDVGTTLSFRTAEVSEITAAAVRSNIIEAYAETVEEVDWRALLRARASVEPIPASQAERMRLRFANALSSIS
GRDEPLFECGPSGYSQFELDVLALCVDAMMGTRDHRVARQSKVQRYIVDRVRDCILERPDNPPSIGELCLMLRISRRTLN
QTFQHALGANPVTYARNVRLNRVRRELLLATPQQGNVSQVATRWGFDHMGRFSSHYRALFGELPSVTLLREAVSQDEPSG
APGSNEALALAR
>AHV92007.1 hypothetical protein D560_1486 [Bordetella holmesii ATCC 51541]
MAVTLGLGYFYQRARRDLVILAMLSAGVICVSLRLAGEWLMQLEPGVWAALPLAALLMAEAVWAARWLRRLGEQRVSSQG
ARAATVAADAEPAGMSAGLSVDPADADAPVIELADDTAAHHAATAPWYVQGLLGLSAWLATLLLLVFLFFPVWSTAIRAQ
CYAVWRCVRPAWRYCAPLPGPFGGNVPLPWLLPGSCWWSSVSWAMTRLPAPASSSCCWLRPSMFLLPMFCCAF
>AHV92008.1 cytidylyltransferase family protein [Bordetella holmesii ATCC 51541]
MKQIGLLGGSFDPIHLAHLALAQSAMAHLGLHEVQFIPAANPWQRAPCWPAPLTA
>AHV92009.1 glutathione S-transferase GST-4.5 [Bordetella holmesii ATCC 51541]
MKLYYMPGACSLADHIVLEWIGKPYETHMLTREALKGPEFLKINPLGAVPALVDGDLVLTQNTAILEYLAEAAPQAGLMG
DGTPAGRAETRRWLGLINSDVHKTFSLVFGAQRYVEDEAAQNALRSSAASQLRSLFGIINQRLSGRAFLTGARPGIADAY
LYVVLRWAHAKDIDLSGYDDLAAFFKRMEADPKVQAALKAEGLA
>AHV92010.1 DNA mismatch repair MutL family protein [Bordetella holmesii ATCC 51541]
MSDRRSIAQLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEIRLEGGGIRRIAVSDDGFGIPPDELPLAVARHA
TSKIRSLSELESVASMGFRGEALASIASVARLSIISRVRQGEHAWQIDAASGEISPASGPAGTTVDVRQLFDNVPARRKF
LRSEATEFGHCLDALERIALANPHIAFRLFHHDKAQRQWLPADPGQRIRDVLGAEFASQALPVDTRYGAIGLMGMVTRPT
AARARADRQYLYVNGRYVRDRTVSHALRSAYADVLHGDRQPAYVLYLDVDPAAVDVNVHPAKHEVRFRDSGAVHRFVAQV
VGQALAQTGGSQLPEPTPQAAVTTDAPAEAARAEQPLPPPMLPPSSYAPATRPHTQVPFRLQEPEGVAARDWQSLYRPLP
ETAAATPGLAEAAAAASALPEHEEQPLGMALGQLHGIYILAQNTRGLILVDMHAAHERVVYEQLKRALDTRSLPRQDLLV
PVVFHAQEKDVALVEEFADPLGELGFEMRPAGPNAIAVRSVPALLARGDIESLARAVLRDLGSVGESRLLTEQRNELLST
MACHGSVRANRRLSLEEMNALLRQMEATERADQCNHGRPTWIQWSVSDLDKLFLRGQ
>AHV92011.1 respiratory-chain NADH dehydrogenase 24 Kd subunit [Bordetella holmesii ATCC 51541]
MSTACTPAQTSAPDVIALVRDLAASHADQPGALLPLLHAVQHALGYIPPQAVATLAEALSLSRAEVHGVITFYPDFRSEP
GGRHRLQICRAEACQAMGGEALAAHARSRLGCDFHGKSADGAYSLDPAYCLGLCAQSPALMLDGRPYARMSVDGLDRLID
ASRQA
>AHV92012.1 hypothetical protein D560_0343 [Bordetella holmesii ATCC 51541]
MSIKAYGARAGDQPLGPLDIRRRDVGPHDIRIDIAYCGICHSDLHQVRSEWAGTQFPCVPGHEIVGRVTAVGEQVTGFKP
GDLAGVGCIVDSCQHCQECKLGLENYCDDMVGTYNSPTADAPGWTLGGYSQQIVVHERYGLHIRHPEKDLTAVAPLLCAG
ITTYSPLRHWQAGPGKKVGIVGIGGLGHMGIKLAHAMGAQVVAFTTSESKRQAALALGADEVVNSRQAEEMAAHAKSFDL
IVDTVAAPHDLDSLLMLLKRDGNLTLVGAPPTPHDAPDVFSLIMKRRSLSGSLIGGIPETQEMLDFCAEHGIVADIEMVR
ADQINASYERMLKGDVKYRFVIDNATLAD
>AHV92013.1 toluene-4-monooxygenase system protein A [Bordetella holmesii ATCC 51541]
MKWEEGYKVSYPEYVYTQREKEAATYGVKAALQRTKTFDHLDEGWKSGTKQHFGGVAQVEYAATLAELKMARFGLNGAWR
NMAIYGHLDELRHNALNTFFGHELVAKDPQFDWTQKTYSTNDWVPVALRTLFDGFMTTSNAVDCALMLPLTFETGFTNLQ
FVALAADALEAGDVNFANMISTIQTDEARHSQQGVATLEILIEHDPQRAQWVIDKGFWANARAFAALTGPVMDYYTPLEH
RKQSFREFMEEWIVDQFIRTIEDYGLKKPWFWDEFMRGLDTWHHSLHMGLWWWRPTLWWNPRAGVSKDEREWLREKYPNW
EKVYGDKWDVIIDNVNAGNINPTLLPETLPWLCETCHLPMCNPTQSRDGKWRVRDHSLNYNGKMMHFCTNGCRQIWWKDR
DNVNHKTLVTRFLSGDIQPPTVQGILDDMGITPDVMGEEVDYHAWAKDYVGREAKGIIQTGA
>AHV92014.1 FUSC-like inner membrane yccS family protein [Bordetella holmesii ATCC 51541]
MTEKHQAARDMVLRALPRGGGFREDDRVMLWNMFVDMLQLLDTLVATHTDYSSLRRTLAGHDALVFMRDALVKMSLELNR
VALDVSRGHKTQYRSSAKAELRAIEYEIEQLKQQGLGEREPEMLALTVQVLRRLRNAARIVDKLAQHTEARSDAIPTSML
RIDKSLTQFISRQELRLGMITSNLRLDSPHFRYAIRVTLAAALAMTLIGIWLAPNMAAHSYWVLLTIVIIMKPGFALTRQ
RNGWRLMGTLVGCILALTLFTLTNNPTILFAVLLGACIMGNSLVQLNYMASAIFNTLFVVLVFHFVAPGTVSLEVIGEQA
MDTALGCALALICSYVLPWWEARYMKPLARAASRANREYLRAGLRYIEAMRQPAPGGAAAGEETPETGERADADADLAWP
GGWAARTCISRSAISPRRSIA
>AHV92015.1 2,3-dimethylmalate lyase [Bordetella holmesii ATCC 51541]
MTSSALKSRLRTGQALLAPGVYDALSALIAEQTGFDALYLSGASIAYSRLGRSDVGLTTYSEVESVLGRITERVRCPVIV
DADTGFGNALNVQRTVRGLERAGAAMIQLEDQDFPKRCGHLEGKSLVSADEMCGKLRAALDARQNDDTLILARTDAVAVE
GLEAALERAERYLNCGVDALFIEALRSPAQMDAACAQFAGRVPLLANMVEGGQTPIESAQALAARGFQIVIFPGGTARAV
AHTLQGYYGSLLAQGSTAAWRSQMLDFDQLNDVIGTPELLARAERYR
>AHV92016.1 comEC/Rec2-related domain protein [Bordetella holmesii ATCC 51541]
MAWLMLLAAGLAVWRALTWDSALLAAQHDNQIFVLPITVASLARGDGHSRTFTAQLDAKRPQGLPEQVRVSWRALPGGQV
SELVPGQRWRMALVLRRPYGPANPYGPHHERRLHAERVGATATVRGQPRLLAPPQGHWLERARHDLRERLAAVLGERPYA
AVIIALVMGDQQSVRREDWHVFNRTGITHLVSISGLHVTMLAGLAAAVARGLWPRLRWRGYFLAEIWAAQRVAAMVAVLV
ALAYCLLAGWGVPTRRTFFMLAVVAWALQARVPLRPAAIVLLAAMAVVMLDPWAVMTPGFWLSFAAVAILMRVALTARRG
NWRARVQAVVADFCRMQMAVTLGLVPVLAFWVGEVSLVSPLANALAIPWVSLVVTPLALLTGVTAALAGQWAWAIAGSLG
WAAHASLAVLMQPLSWLAKWPWGTLPVAASPGWIGLLALAGVIWALQGRGWPARWVGWLCVLAMCAAHGDVAARTSAAWL
LAAYGTRCGARHGRGPGDRPSRASL
>AHV92017.1 parB/RepB/Spo0J family partition domain protein [Bordetella holmesii ATCC 51541]
MLGIDKLRAGKYQPRTRMDEGALNELAESIRTQGIMQPILVRQLAGASGGVYEIIAGERRFRAAQIAGLKEVPVLVREVA
DENAAIMALIENIQREDLNPLEEAQGVRRLLDEFGLTHEHAAQAIGRSRSATSNLLRLLNLAAPVQTMLLAGDIDMGHAR
ALLAVDAAMQIQLANLIIARRLSVRETEKLVAKTVKDAEANPRKKSAGASRDVTRLEDALSDHLGTRVTLKIGARDRGQL
MIDFHGWDHLNALLERQGLAGVIDA
>AHV92018.1 autotransporter beta-domain protein [Bordetella holmesii ATCC 51541]
MTGDIYGGVSQGGQAGAVSISIGSTTTTTPGQAGRGGLTQNNTVTLIGDQIAIAGALYGGLSVNGDGLVNLDPTFTSYYQ
GNTLTLQGYRGTVTNIQHFENYNWVLPTDVVNKDSLIHITGSQAVQLDNTKHSVALQSGGNQLNGGDVITLIDKATGSPT
LTTPNVKQGHFLVYDTTLTVVNDELVLTIASKQSTGSTTPAAVRINPTSKAFLEGRLAALAQINQGADLISDSAIGAARA
SLGTGNSNLFALIDGGKSRYDTGSHIKLRNVGFVMGAAQAFTLRSQSTMMVGAFVEHGNGHYDSYNSFDNYGDVHGDGRV
RYTGGGALFHMNVAGTGMGPAASAPSIQDDDGLYLKAAVRAGQAKTRFDSDLIDPQGNRGQYDSKANYFSAMAGVGYALR
LDAKQKLDVYGRYTWSRLGSDSVELGKDHLDFGTTNSSRVRIGTRYSYAVTPQVTPYVGLAYEREFSGNAKGTAYNLSIN
SPTLKGNTGIAELGVSMTPLADKQNLTMNVGLQGYVGDRQGGAANLRVRYAF
>AHV92019.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MNASTLPDVEQARFNMVEQQIRPWNVLDPRVLDALFTVRREQFVPPALRALAFSDLELPLEINAVDTRQNMLAPKMEARL
AQELQLQPTDCVLEIGTGSGYQAALLAHLAQQVTTVEIDSRLVAFAQQNLQLNNVIDVKIETGDGRNGWGSTEYDAILLT
GSVPVVPDALKYQLRVGGRLVVIVGEAPVMTACRITRSTAASFETEELFETVIKPLRGTAVSHFKF
>AHV92020.1 glutathione S-transferase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MTALPILYSFRRCPYAMRARLAMLAGGRVCELREVSLRAKPAAMLSASPKGTVPVLVLADGQVIDQSLDIMRWALQPQDL
PQWLVPETGQVDDMEILIGRCDGPFKADLDRYKYPVRYEGVDPLVHRASAADFLAALERRLLAGRYLFGSRPCLADMAIA
PFVRQFAHVDLPWFAAQPWPALHRWLDDFLASRDFEAIMQKKPVWIADTEGPRFPAGR
>AHV92021.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MNDTALPGSGSPNAGAWQRLRMELRSWPVLISLVILLLVVVAAVFAPWMGTVDPTAIHPAARLKPPFGEYLFGTDAFGRD
VWSRVVYGARISLVAGLGAALISVGLGLVIGVLAGWFRSLDGIIMRTMDAIMAIPGILLAIALVSVSGASLTTVLVAITI
PEIPRVVRLVRGQILSVREEPYVEAALALGTPLPSLLWRHMVPSTIAPLTVQGTYVFASAMLTEAILSFLGAGIPPEIPS
WGNIMSEGRMYFRMLPGLILFPGLFLSLTVLSVNMLGDALRDALDPKMVRRS
>AHV92022.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MSGALIQLRDVWREFAAGDQVIAVLREVNLEIEAGEMVAIVGASGSGKSTLMNLLGCLDRPSRGVYCVDGRETSSMGPDE
LAELRREHFGFIFQRYHLLADLTAQGNVEMPAIYAGLARGPRQQRAAGLLRRLGLAERLDYRPGQLSGGQQQRVSIARAL
MNGGRVILADEPTGALDSQTGQDVLRILEELNAAGHTIVLVTHDMSVARHARRIIEISDGRIVSDRANPDAPARAALAGD
AGPDADKPPQRPWRAWLDRGREALGMALLAMNAHRLRTCLTMLGIIIGIAAVVSVVALGTGSRQKILSDISAMGTNTVDI
FPGKDFGDEKAATIRTLVPADAQALARQPYADSVSPEVSTTTTLRYRNVSVNGSVQGVGAQYFRVRGVSIAQGQFFDETG
VTRRSQDVVIDTNTSKTLFGNHTDPIGQVIFLGSVPARVIGVTRPQETLFANADTLHVWIPYTTALSRILGQQHLLSITV
RVSDSMPTKAVEDAITTLMQQRHGTKDFFVFNTDTIRQTIERTTATLTLLVSLIAVISLVVGGIGVMNIMLVSVTERTRE
IGVRMAVGARRSDIMQQFLIEAILVCLIGGLLGILLSLSIGMLVSQATRGAFEMVYSGASMVAAFVCSTLIGVAFGYLPA
RNAARLDPIESLARE
>AHV92023.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MKKHDPNSGALGRELPTKWHADVNAELNAGETLLGWLETDLDARLCFRPGLVLVTDSRLLARTPEDNQWRSYPFAPGQQL
SLQDHAGAVCLELANNHERLAQWRFTLGHNPAALKLLTAFEGQQALRLSQIVAPAQQEAICPTCQNPIPQGQDDCPTCDE
EVQPSSTWALLRLWRFAHPYRLPLISGFILTLLATAATLVPPYLTMPLMDEVLIPFQNGEVIDYNKVRFYLGGLLASALV
AWALGWARTYILAWVSERIGADLRTSTYAHLQTLSLEYFGGKRTGDLMARIGSESDRICVFMSLHLLDFATDVLMIAMTA
VILFSINPWLALVTLLPLPFIMWMIHVVRDRLRHGFEKVDRIWGEITNVLADTIPGIRVVKAFAQEKREVERFREANNRN
LEVNDRVNTVWSLFSPTVTLLTEIGLLIVWIFGIWQVSQKQITVGVLAAFLAYIGRFYTRLDSMSRIVSVTQKAAAGAKR
IFDILDHVSSVPEPQRPVTLPQVQGRIELRDVGFRYGNRSVIRGMNLAIAPGEMIGLVGHSGSGKSTLINLICRFYDVSE
GAILVDGLDIRSLRVADYRGNIGLVLQEPFLFFGTIAENIAYGKPDATREEIIAAARAAHAHEFILRLPHGYDSLVGERG
QALSGGERQRISIARALLIDPRILILDEATSSVDTTTEKEIQKALDNLVRGRTTLAIAHRLSTLRRANRLVVLDRGRIVE
EGTHEVLMAAEGAYYKLYQAQACNNENEGGDGDIAEVA
>AHV92024.1 aminotransferase class I and II family protein [Bordetella holmesii ATCC 51541]
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLGAVRKAEIARVEAAAARGYLPIEGIAAYNKG
AQTLLLGNDSVVAAEGRALTTQTLGGTGALKVGADFLKQLLPQSKVMISDPSWENHRALFERAGFTVENYPYYDASTRGL
NFDGMLAALQAAPEQTIVVLHACCHNPTGVDPTAEQWKQIADVVKARKLVPFLDIAYQGFGEDLDQDASVVRLFAGMDLT
MLISSSFSKSFSLYGERVGALTVVAGNKDEATRVLSQLKRVIRTNYSNPPTHGGIVVANVLNNPELLAEWKQELAGMRDR
IRLMRKQLVEKIKAQGAAQDFSFVLQQRGMFSYSGLTAAQVDRLREEHAVYAVSSGRICVAALNSRNIDVVAAAIAAVIK
>AHV92025.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV92026.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MACLLGVIGAQGWYLGRRYAWLVTLYAAVCLAATSAFPSWWDNPAFFLLFIPMIAGFIEAAVYALMADHKFDQRYNPGLG
AVSRTGWPAVLVALLACLAGGIVSMLAVAMVVVHVWTAMGWLDGYVF
>AHV92027.1 hypothetical protein D560_3925 [Bordetella holmesii ATCC 51541]
MDEPQQPLRRRRQARLPAPLGLAQVLLALVCGVLAYRRRPR
>AHV92028.1 hypothetical protein D560_0146 [Bordetella holmesii ATCC 51541]
MSGTMSAHEFALAALNQRGLFIVLDLAGTFAFAISGAVAARNRGLDWFGVMVIAFSVACGGGIVRDLCIGAVPPAGLTDW
RNLTVAMAAAVMTTAAGSLVARLAHPVTLFDSLGLG
>AHV92029.1 carbonic anhydrase family protein [Bordetella holmesii ATCC 51541]
MFPKRLTDGYQSFLEGRFPAERSRYEALAEKGQRPEILIISCCDSRVSPEAIFDVGPGELFVVRNVANLVPPCDPDSESS
YHGTSAAIEFAVNGLEVKHIVVMGHASCGGIRSYYDDAEPLSKMDFIGKWMSQIAPVATSLGESTGDRAQDLKRLELAVI
GHSLDNLMTFPSIRRRVQSGALQLHGCYFGVASGVLFVRDTASGAFVPCLEHQPG
>AHV92030.1 putative exported protein [Bordetella holmesii ATCC 51541]
MLSANAEPSYSYAPTVQMGSNGYAYMSPGYSVAPVYAPPPVYVQPPAYAPAPAYAAPVYEPAASYAADPTDPASVNLAPA
PVAQTTAATGHVNCARYAMDQSGFDPAGASQWTTQVMVDSYNRALQTCRDQRWGS
>AHV92031.1 hypothetical protein D560_3465 [Bordetella holmesii ATCC 51541]
MLREVPLTQTTMHRQLVVTYREGAYIAPAAALLVECLRGEQAVAASKPGSR
>AHV92032.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MQHFFMSSDFRTPVKAPATIPYFLQEQIRELIIDGTFAPGEPLREQDLEQRFGTSRSPIREALRLLELTGMVAHVQRRGV
RVRRYTKIEIQQLCALRAELAGYSIRQLDGLISAELLQQLRACDGEMARMHAAQDLRRYADALRQFYLIAVRHTGNKPLE
DVLARLYEQVEPMRYIVLRHALAKLAYDAFHRDVLLALEGGA
>AHV92033.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase [Bordetella holmesii ATCC 51541]
MTSALHESSIKSLPLLGRGKVRDMYAVGDDKLLIVATDRISAFDVILDDPIPGKGQVLTELTEFWLNKLAHILPNHSTGV
KPEDVVAADEIEQVKGRAVVVKRLKPILVEAVARGYLIGSGWKDYQASGAVCGIKLPAGLQQASKLPEPIFTPAAKAEFG
MHDENVDFAHVVKEVGQEMAERIRTITLRLYDEAAKFAATKGIIIADTKFEFGLDDQGTLHLMDEVLTPDSSRFWPAEGY
REGISPPSFDKQFVRDWLETQTWDKTPPAPRLPADVLTKTAAKYREALDRLIA
>AHV92034.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MFRSTLTFCLAALLAAGAGSPAVADTYPTRPIKVISPFPAGGATDVLTRILAERMGKDLKQTLIVENKAGAGTSIGASYV
SREQPDGYTILMATNSTLVTNRFLYKDLPYDPDGFAPIGLVGIGPLVLLSSPKQPFKSTRELVAYAKNHPGKLTFASFGP
GTSSHLAGELFKDQAGIDILHVPFKGATQALPALISGDVDVFFDMVATGMPQAKAGKINVFGITSKARLPSEPALATLAE
QGWPTFDMSAWFSFVAPKGTPPDVLARLQQALQTTLSDETVRAKMLDMGIDPRSGSAADLQAQIRNEQPLVQQLIKQANI
ALQ
>AHV92035.1 hypothetical protein D560_0591 [Bordetella holmesii ATCC 51541]
MEPSKPVALGISMTLKRTDQGCVFTFAESFCIQANVYIECADVGHLLVGQ
>AHV92036.1 CAAX protease self-immunity family protein [Bordetella holmesii ATCC 51541]
MLFGLAHYAGGPGLVALASVAGLFYGWAYQRGGLAAAVVAHLLLNTLHVAFFSYPAVA
>AHV92037.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MQRASGVRLHLCRLTSAAGVALLRAARAEGLPVTADVSMHHLHLTDLDIGFYDSRCHLRPPLRGQRDREALSQGLADGTL
DAVCSDHRPVSAQQKAGPFAGTTPGASGVELLLPAVLKWARSRAMAPARALASLTLGPARVLGLPAPSLKPGGAADLCLV
DLEAERAVAGLQSGSEQTPFTGMMLPGHVRATVIGGNLLWEIPA
>AHV92038.1 FAD linked oxidase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MHCLKYGLTVHNVLKVRIITIDGDVVELGSEAPDAPGPELLPLFIGSEGMLGVVSEVTVKLIPKPACAQVVMASFSSVEA
AGHAVTQIIAAGIIPAGLEMMDRQATRMVEPFVQAGYDLDAQAILLCESDGTPEEVAHEIERMEAIFRAAGSTRCQVSSS
EAERLRFWAGRKNAFPAAGRVSPDYYCMDGTIPRRHLARVLNAIEQMEDEFGLRCANVFHAGDGNLHPLILFDSNKPDEV
ERAEKFGAAILELCVQVGGTVTGEHGVGMEKINQMCVQFSRDELDAFLAVKRAFDPPGLLNPEKVISTLARCAEYGKMYV
HAGEMRFPDLARF
>AHV92039.1 cell shape determining, MreB/Mrl family protein [Bordetella holmesii ATCC 51541]
MFGFLRSYFSSDMAIDLGTANTLIYVRGKGIVLDEPSVVAIRHEGGPHGKKVIQAVGQEAKQMLGRVPGNIEAIRPMKDG
VIADFTVTEQMLKQFIRMVHPRNMLAPSPRIIVCVPCGSTQVERRAIRESALGAGASHVYLIEEPMAAAIGAGLAVSDAS
GSMVVDIGGGTTEVAVISLGGMVYKGSVRVGGDKFDEAIVNYIRRNYGMLIGEPTAELIKKQIGSAFPGSEIREIEVKGR
NLAEGVPRSFTVSSNEILESLTDPLNQIVSAVKIALEQTPPELGADITDKGIALTGGGALLRDLDRLLQEETGLPVVVAD
DPLTCVVRGCGEALEHLETLGAIFIND
>AHV92040.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MTKHPFLHGALRLGATLLLTAALAACGGSDHDDDSAAAPDNGTQPQPPAVKPELRCAP
>AHV92041.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MIGLYDIDKHFGDNPVLRQVSLQVAAGSVTALIGPSGSGKSTLLRCVNLLEISERGRLQVGTETLDFQGRPPIRDAVLRV
RRQTGMVFQNFQLFAHQTVIGNVMESLVTVLKWPREQAREHAMALLKKVGMAHKAQAWPATLSGGQQQRVAIARALAPSP
RVLLCDEPTSALDPALAAEVVDVLKRLADEGMTMIMATHDLRLAANIADQVIFLQAGQVVESGPPRAVFTQARDARTREF
VITLTEGLPPEWGQPQ
>AHV92042.1 putative sulfatase [Bordetella holmesii ATCC 51541]
MLRKGPWKYHHYVRFEPELFNLEQDPEELHDLAADPAYATVLADMKAALYAICNPEDVDRQAKADQAALIERLGGVQIAS
TMGSSSATPAPVVEKKA
>AHV92043.1 putative twin-arginine translocation pathway signal 2 [Bordetella holmesii ATCC 51541]
MRRVLARVSLSALMALVVFVQGAVAMAADNGQQLRAQAAQALQHLYVKVPGSAELGEKAEAVLVFPKIYKAGFVVGGEHG
KGVLFKGKEVVGYYDISAMSVGLQAGAQMFSYALFFMNRTSLDYLAKSDGWALGSGPSVVLWDKSFASSVSTTTLSQDVF
AVPFGGQGLMAGMGLEGSKISRASP
>AHV92044.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQARGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92045.1 imidazoleglycerol-phosphate dehydratase family protein [Bordetella holmesii ATCC 51541]
MRTAEIIRNTNETRIRVAVNLDGTGKQSIDTGVPFLDHMLDQIARHGLVDLDIKAEGDLHIDAHHTVEDVGITLGMAIAQ
AIGNKAGLRRYGHAYVPLDEALSRVVIDFSGRPGLEYHIDFTRACIGNFDVDLTREFFQGLVNHALMTLHIDNLRGFNAH
HQAETVFKAFGRALRMAMEVDPRMGDVIPSTKGVL
>AHV92046.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MRWLPWAALLAAALILAWWIPASQGSDYWIRNWKVWNISSFSMPDLRLSARTLRDLPWYLWPTWPLALLAIWRWRNWLFA
PHIWLALMLLATSCLMLFFLEDPNDAEYVLLAVPCAVLGAFSLPTLRRGVVNTLDWFAVMCFSLTVATAWLGWVALHFGW
PAQIARNIARQTTGYEPVISWFAFGLAVLVTAAWALLVIWRLRVKPAALWRGTVLSAGGLIATWLLLVLLWQPAVDYARS
YRTVSGELAAAIKANSRPGECVRGLSLGSGQRASFLIFDNLTFSYDSRCTLMLQQTSVSSLRDGTAAYSEGADELWHGGR
RADRHEVFRLLRVTPPR
>AHV92047.1 hypothetical protein D560_3581 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSSRIMSAQADVQHQGQALALFNSYRR
>AHV92048.1 chalcone-flavanone isomerase family protein [Bordetella holmesii ATCC 51541]
MIDVEGVPVAQEINQAGQTLRLVGAGVHTKFVFRIYLAALYASDPHAAPNQLIEGPGARRLHLQMLRDIDSVALGEAMRG
ELVSTDGANGTRALAPSVERLSHMLNTIDHLREGDTIDLELEGTTVDIVYNRQDKGRIQDPLLPAALMRVWLGDTPTQAS
LKQALLGLH
>AHV92049.1 30S ribosomal protein S17 [Bordetella holmesii ATCC 51541]
MSETQNTQVTKRQRTLVGKVVSNKMDKTVVVLVERRVKHPIYGKIVMRSAKYKAHDETNQYNEGDTVEIAEGRPISRSKA
WRVVRLVEAARII
>AHV92050.1 aminotransferase class I and II family protein [Bordetella holmesii ATCC 51541]
MRKFSRIERLPPYVFNITCELKMAARRRGEDIIDMSMGNPDGATPQHIVDKLIEASARPTTHGYSVSKGIPRLRKAICDW
YQRRYAVEFDPDSEAIVTIGSKEGLAHLMLATLDRGDTVLVPNPSYPIHIYGAVIAGANIRSVRMTPGIDFFEELERAVR
ESIPKPKMMILGFPSNPTAQCVDLSFFERVVALAKEHDILVVHDLAYADICFDGYVAPSIMQVPGARDVAVEFFTMSKSY
NMAGWRIGYMVGNRELVNALARIKSYHDYGTFTPIQVASIAALDGPQDYVSEIVQQYQSRRDVLVRGLHEAGWNVEIPKA
SMYIWAQIPEPYRAMGSLEFAKRVLSDAKVAVSPGIGFGEYGDDYVRFALIENEQRTRQAVRGIKDMFRKDGLLK
>AHV92051.1 chorismate mutase [Bordetella holmesii ATCC 51541]
MDDALQAKLRPLRDRIDAIDSQILDLLCQRARTAQEVGEVKHAAHADGPVLRPEREAEVIRGLQQRNAGPFPSAAVASVW
TEIMSACRGLERGMTVAYLGPQGSFSEQAALEQFGHSVTQMPCASFDEVFRAVESAEADVGIVPVENSTEGAVNRNLDLL
LHTPLKIMGERSLLIRHCLMTQSGAMDGVTTISAHPQALAQCQGWLNRHYPDLKRVAAASNSEAARVAATDPTVAAIAGE
VAAPAWNLAVVAAGIQDDAQNRTRFVAIGRIEPLPSGRDKTSLILAVPNRAGAVYDMLAPLAVNGVSMTRFESRPARTGQ
WEYYFYLDCLGHQKDTNVVQAFAALAQQAAFFKILGSYPAQ
>AHV92052.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MDLRALRAFCEVVRQGGFSQAARTIHATQPTVSKAVRQLEEEIGMPLLDRQRHPPA
>AHV92053.1 periplasmic binding domain protein [Bordetella holmesii ATCC 51541]
MKRMLTRRLPAALVCAAAVLAGAVHAEPAPIKVGAVVSATGPASFLGDPEQKTLQLYVDKLNAEGGVLGRKLALTPYDDA
SDANKANAFVRRLIMQDGVDVIVGGSTTGSTMAMVPQVQSAKIPFVSLAAASVIVEPVKPWVFKMPHSDRMAAVKVIEDM
KKNGVTRMALLSDTGGFGKSGRAETLKLAQSLGVEVVDDQQYGERDTDMTP
>AHV92054.1 copper binding periplasmic CusF family protein [Bordetella holmesii ATCC 51541]
MAFSRKYTMSMAMTTAMAFVSLASPQVLAQTAQASGEVRRVDASAGTVTLKHDAISALDLPAMTLVYQAAPALLNHLKPG
DKVRFTASRKDGKYVVTEITK
>AHV92055.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKRRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV92056.1 peptidase M20/M25/M40 family protein [Bordetella holmesii ATCC 51541]
MNARVPDDALPPTLDPKALQAFVDDKWDTEIIPALTEYIAIPAKSPAFDADWEKNAYIERVVRDAAQWVQAQKIHGMTVE
VVRLPGRTPVIFFDVPATRKDNGDTVLLYGHLDKQPEFSGWRSDLGPWTPKYENGKLYGRGGADDGYAIYASLTAIMALD
KQGVPRPRCVGIVETCEESGSYDLLPYVDALRDRLGNVALVVCLDSGAGNYDQLWMTTSLRGMVSGTLEVQVLDEGVHSG
DSSGVVPSSFRILRHLLDRLEDSGTGRLLPQSLHCEIPADRIDQVKATAQILGDEVWRRFPWSCGAEAGFVLPMTTEPEQ
ALLNRTWRPTLSVTGAEGLPPLSSAGNVLRPRTAFKLSLRLPPLIDAVAASQEIKALLEADSPYNAKVIFHANEGAATGW
NAPSSAAWLSQALDLASQDYYGAPCGYIGQGGTIPLMSMLQKGFPKAQFMVCGVLGPKSNAHGPNEFLHVPYGKKLTAAV
AQTMAAMPGA
>AHV92057.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANQPLLTAYLMRDEL
KQLWFYQHPGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEY
FFLKIRSAFPGIPR
>AHV92058.1 putative permease YjgP/YjgQ family protein [Bordetella holmesii ATCC 51541]
MWLSVLLVRLLGEAAGGSIGADVVLGLAAFSTITALPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVLR
VAVPIAAVVAGLTLVASPWAYRQIGEYRERFEQRSDLSKVAAGQFAESGRGDRVFFTEDPVNPRDELGAVFARAIDPEWF
SVLTAKSACGETLDNGDRFLVLSGGHRYDLKPGTPEVRLTNFEEYGIRLESKAGDDPIAEARAAAERSSKARSTTQLMQD
NTNSSWSQIMWRVSMPLAALNLALLAIPLGAVNPRLGRSGDFLIAGLVGLFYMNLINLSRAWISSGKLPFGIGVWVIHAI
VLALTIFLLYRRLRVKAPKPAKAA
>AHV92059.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MDFPIQNLAVIGAGAMGSGIAALFASQGLPVVLIDPVDGALARATQIIERQLSVYAPQDVDNCMARIQMSADLLAAAECD
LVIEAVPEKLDLKRHLFAQLDQICKPATIFATNTSGLSINAIAQAVTRRDRFVGTHFFTPADVIPLVEVVRGDESADAAV
DLVMATLKAAGKRPVRVNRDIPGFIANRIQHALAREAISLLEKGVASAEDIDEVVKWSLGIRLALSGPLEQRDMNGIDVH
HAIASYLYADLENRETPSALLTSKVQNGEIGAKAGQGFYAWPAERRERVLRDKSAALAGLVQWLNTQKLD
>AHV92060.1 tripartite ATP-independent periplasmic transporter, DctQ family [Bordetella holmesii ATCC 51541]
MLQRLSVILSGISKAIAALAVALLAILISYVVFARFVTHTTPHWAEELPRLVLVWSAFIGGVTCSFERSHLMAGLLPFVV
RSPRVLGFFERLNQVLVIVGLIVLGYAGWELADLTMDQTLPALDVSAGVVYLALPFACALTIVVHLAQLFEPAPVKE
>AHV92061.1 small Multidrug Resistance family protein [Bordetella holmesii ATCC 51541]
MNSWIHLSMAIVAEIIATSALKSSEGFTRLLPSLVTVAGYAIAFYFLALTLRVIPVGVAYAIWSGVGIVLISLVGALLFK
QHLDLPAIIGIALILAGVVVMNVFSKSVGH
>AHV92062.1 transposase family protein [Bordetella holmesii ATCC 51541]
MAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSAFPGIPR
>AHV92063.1 preprotein translocase, YajC subunit [Bordetella holmesii ATCC 51541]
MSVIDTAGLILAQAAPEGNMLGGILPIVLMFVILYFLMIRPQMKRQKEHRNLIAALAKGDEVVTAGGILGKVSKVTDSYI
SIEVADLAEKPVEVTLTKGSVTSVLPKGTIKAL
>AHV92064.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MIVGFPPGQATDIVARIAAKQIQDALGKPVIVENKPGAAGSIGSDLVAKADPDGYTLVVGSSGTMAINPSLYSHLPYHPL
KDFEPISLLSVVPLFLVVNPSVKAETAADFVKLAKASPGKLNYGSGGSGVTSHLTMELLKYEQGMDLVHVPYKGSPAAAT
DLIGGQVSAMIDTGAVLLPYARNGKLRVLAVASEKRNPAAPEIPTMEEAGLGHFVAPAWVGLATPKGTPQPVIDKIYQAL
AKNWTTAPEVGRVLNGLGAEAVVMPPAEFRSYIQSEIDKWAIAVNLAGAKVD
>AHV92065.1 transglycosylase SLT domain protein [Bordetella holmesii ATCC 51541]
MALLTTLLILSGCASTRPPADPENICAIFREKPQWHDAALKAQEKWGAPVQVPIAMMYQESSFKHDALPPRYYFLGFIPW
GRVSSAYGYAQAKDETWEDYKREAGGWLANRDDFADSIDFMGWYMAKTQRINSISKWDAYGQYLNYHEGWTGYRNRSFER
KAWLQRVARQVQARAERFGAQYQQCQRELSRGGWLF
>AHV92066.1 hypothetical protein D560_0757 [Bordetella holmesii ATCC 51541]
MLACILQKRLCLLASLLSVSAWAHPWPPHLLVGQGYGHCPDGYHGLPMEHARLPTLLPQLQALPPGTYGLSDGKYLSQPQ
GGTLVTATADEAASLPRNLCLAWGPIRPTIDSATPQAPHDHGRLRYVDVQVSALERPHGKMCARFSRHGQPVAAGCLDAP
LSSPATDDLLRMFRLGSTLRLTLDARQPRGRLSTGQAAYRIETLSY
>AHV92067.1 hypothetical protein D560_1513 [Bordetella holmesii ATCC 51541]
MRSDVTVIFDARRSVDLSVQVEPSGPAALAARDWFDSAWELMGCEPLRPSGKVLLLDKIMGVADALGYDTLSSDAKEAEE
FARNAALALERARVIVDLPGLSIGY
>AHV92068.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLETRSLGIRFGGHTAVDGVSARYAPGTLTAIVGPNGAGKTTYFNLISGQLRASTGAVLLGGRDLTRLGVAARMHAGLGR
AFQLTQLFPRLTVHENVRLALQSRAQGPGWRHIKLWNRWRDDHALIEHADALLVRARLQQRRDQAAADLPHGDQRKLEIA
MLMALDPVVFMLDEPTAGMSVDDVPVILDLIRELKQDPAKIIMLVEHKMDVVRELADRIVVLHNGRLMADGLPADVIASP
LVQQAYLGMGNAA
>AHV92069.1 vitamin B12 transport domain protein [Bordetella holmesii ATCC 51541]
MIAGVDSARQAQALQQDWRATGLPSARAGHIYALDADTLYRPGPRLIESTATLCEQIDRARR
>AHV92070.1 putative virulence protein transporter [Bordetella holmesii ATCC 51541]
MSREKTDFWVGLFVLLGAAALVFLALRAGNLSSFSFAPTYTLTASFDNIGGLKVRAPVKSAG
>AHV92071.1 dihydrofolate reductase type 3 [Bordetella holmesii ATCC 51541]
MILVVAYARNRVIGRDNALPWRLPGDLAHFKRTTLGHPIVMGRNTWESLGRPLPGRQNIVISRNPAYRAEGAVVVPDLQA
ALDAAQAEDVYVIGGAQIYAQAIPLASRIIATEIQADVPGDAWFPLLPGHAWKETSRAAQPEENGYRYDFVVYDRSA
>AHV92072.1 acylphosphatase family protein [Bordetella holmesii ATCC 51541]
MQDPHIETVFVVVRGKVQGVGYRHATVRRAHLIGATGWVQNMEDGTVEAMVQGTPDQIDQMLEWMRRGPPAAVVTDLESR
RDDGERRFKHFAQH
>AHV92073.1 hypothetical protein D560_1060 [Bordetella holmesii ATCC 51541]
MAGRAVIAIAFDLAKRDVDTECAEVMQSFDAGPCRLADQALGDRCAIDNVAWRRRQCGPGEGEDEQTTEESGGLAHRGGV
VYAERYTQFRQAWLQIVAAGLPRIVSMNCRHMPAVP
>AHV92074.1 alpha-2-macroglobulin family protein [Bordetella holmesii ATCC 51541]
MTLLALGEPALDLSEYDIGGYPARNNNLFVYAGRNLYRPGEQFNVSVLARDPDGRPLAASPLTATLKRPDGRVVSNTLWH
PKERLPNYLEQVVSLAQDAPTGTWMLELRVDPAARTPDASWKFQVEEFLPERMKLALNTEQPVLHPQDSWSVDLQGDYLY
GAPAAGNRVLASFQVKRDRVALPRQWPGFIFGDVADDTRRRFEELPDTELDEQGRGEIRVDPQAADAHSPMTVRLSVSLL
ESGGRPVVRSIERNVWPAENLIGLRPLFDRDVTREGAPAGFEVIRVDAEGKPQPVKGAQLRLYREQRQYYWRFDDQRGWN
NGYTETEELVDSRVMDIEGRAALTVDVNWGRYRLELADPQTGEVARYRFYAGWNAQDADAVGNRPDRVQLQMQGLPAEPG
GKVRMTVLPPHDGQALITVEGDRMLWSQWLPVKTTGTEVEIPVSADWKRHDLYVSATVFRPGSEGDRVTPARALGLAYLP
LASKGRKLAVSLDAPGKIEPEKPATVRVNVGDLPAGKAYVTLSAVDVGILNINQYATPDPLDFFFGKHRYGPELLDMYGK
LIEKMDGTPGRLKWGGDAAMRGDSRSLPKKVKLVDLFSGVVELDESGQADIDFDVPDFNGTLRLMAVAFSADRYGSADAE
VTVAAPLVAELSTPRFITPGDQAAVALDLTNLSGATRSVSVKLQALDPLAIADSTRTVVLKDKERKTLRFVATTTSSYGL
ELMRLVVEGDGLRIERESVLQVQPAHAAERRVRRIRLSPGQEWTPSADLLADWHADSIMASMTLSNRPPLNVSALVQGLL
NYPYGCTEQTISATIPWVIIDDAAAQRFGLQPHTPAERQSRIDGALARLSGMRAATGSYSLWGDYSSRDVWLTAYALSFM
QDARDRGFKVADDSLQRTRQWLLEQLQQTPNSFGSWSANLRKGMESGRIDSAGAEVLRNDHRRFAGLASAAYALARDGKA
PLSTVRQLFDNYGDRARSPLPLIQLAVAFKLLGDDGRMKTALEQGMTRAYGITRRGAAAYEEWLGDYGSSVRDYTQAYAL
VNQYGLNHPRQETLLEEAAARLGNRSYLSTQERMALLLAASAAGGDRNSPWQASLQQAGGNRSLSGAQDQVLAVEAAEFG
AMRVRNNGNQALFVEFDVQGTPRTAPVARNDVITLQRRWYRPDGTAWDGGLLQTGDMLVVRIQADANQYVPDALIVDRVP
AGFEVENLNLSQSPALQDWQIGGREVAQAMANPNIKHREFRDDRYVAAATLGRGKVDIFYLARVVTPGRYSVPAVVAEDM
YRPELRGVGDTWSSIEIRDRQPGK
>AHV92075.1 aldehyde dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MYEQLALYIDGEFLSGDGRKTEDVVNPATREVLGQLPHASQADLDRALEAAARAFETWKRTSPMERSAILRKVGALSREH
AQEIGRNMTLDQGKPLAEAIGEVTSCSEHADWHAEECRRIYGRIVPPRNPDARQLVLHEPIGVCAAFTPWNFPYNQAIRK
ICAALGAGCTMVLKGPEDSPSAVMAIARLFHEAGLPKGCLNIVWGEPAKISDYLIRSPIVRKVSFTGSVPVGKQLAALAG
AHMKRVTMELGGHSPVLVFDDADVTRAAEMLARFKIRNAGQVYVSPTRFYVQEGAYDAFVARFTEVLSGIKVGNGMDAGV
EMGPLAHERRVPAMKQFIDDARKHGAKIVLGGDAPSDKGYFFSPTVVTDIPDHAMLMTEEPFGPLAPVVRFKDTDEVLKR
ANSLPFGLSSYVFTESLKTATKVSNGLEAGMVNINHFGSALAETPFGGIKDSGIGSEGGLETFDGYLVTKYITQI
>AHV92076.1 universal stress family protein [Bordetella holmesii ATCC 51541]
MFKKILIPTDGSPLSAQAANAGITFARSIGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKAAAEQAEQYLKQIIDR
AHTAGVTVESRAVSNFNVADGVVQAATDTGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAATAVLVYRVKEEKK
>AHV92077.1 tRNA(Ile)-lysidine synthetase [Bordetella holmesii ATCC 51541]
MRAALSDVPAGQAVAVALSAGADSAMLALAAAAAAVDRPLLAFHVHHGLQAQADEWAAHARRLGDLLGIAVRVVQVTVPM
DGSGMEAAARAARYAALADAARRDGVSHVLLAHHQDDQAETVLLRLLRGSGVDGMAAMRASSQRDGVTYLRPWLDLNRQE
IRRAATAFAELTGWQAVEDPSNADPRYTRAAVRTALSPLLDARWPGWQAIVARHARQMGEAAQILHEVAGEDFARLQPDA
DGRGFGLAAWRELSPPRQAQVLRYWLAQAGLRMPAESRLAELMRQLRQLHALGHDRQLRVRHEGHEIRCHRGRVWLEIAP
GPVDAAPR
>AHV92078.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MSNTSEAVSVRTIVAGTVVVLLAMGVRATFGLFMQPMGLAHGWGRELFSFAFALQNLVWGVSCIFMGIMADRYGSGRTVV
LGALLYFCGMLGTRYAADPFTLCFMSGVVVGLGQAGMTFPVILPVIARAVPPAYRSTAMGIASAGGSLGQFLVVPGGQFA
ITHLNWTGALWLLSLLVAAALPLAWFLRGKPQAHTGTQTLGFAVRQALTHPSFHFLSWSYFVCGFHTAFITLHLPAFVSD
AGLNASYGATTLALIGLFNVFGSFYAGKLGGRYSKKWLLAALYGLRAIGIVLVLALPLTPLVLYVFAAWMGLFWLGTVPL
TQGLIGEIYGLRFAATLSGIAFLFHQIGSFTGVWLGGYVYAHTGSYNGVWWMGLALALLAMVLCLPVRERVIGAAA
>AHV92079.1 hypothetical protein D560_3336 [Bordetella holmesii ATCC 51541]
MSPDGVSWTTPRVWVSGVQKFMRADTPRSNQGRQPSKRAF
>AHV92080.1 ferric uptake regulator family protein [Bordetella holmesii ATCC 51541]
MSDQSELKNMGLKATFPRLKILDIFRKSDQRHLSAEDVYRALIGESVEIGLATVYRVLTQFEQAGILSRSQFDTGKAVFE
LNDGDHHDHLICTNCGKVVEFSDVDIEKRQHKVAKDNGFVLESHAMVLYGMCSDCQRN
>AHV92081.1 adenosine deaminase [Bordetella holmesii ATCC 51541]
MRDWLIRLPKAELHIHLEGALEPELLFALAQRNGIRLPWADIESLRQAYHYQNLQEFLDLYYLGAQVLQTEQDFYDLTWA
YLNKCAEQGVTHTEPFFDPQTHTDRGVPFETVLSGIQGALADGRRQLGISSGLILSFLRHLPEAAAMATLEQALPYRDAF
IAVGLDSSEAGFPPRLFERVFARARAEGLPAVAHAGEEGPPAYIWEALDLLKVKRIDHGVRAWEDARLIEHLVDIQMPLT
VCPLSNVRLNVFSHMGEHTVLDMLDRGLNVSINSDDPAYFGGYVLENFLALQQHLPLTPEQARQLADNSLAAALAPRA
>AHV92082.1 HAD hydrolase, IA, variant 1 family protein [Bordetella holmesii ATCC 51541]
MNRATTELVIFDCDGVLIDSEIIAARAQSQALAAHGIDISPQDAARRFAGIPDHDMWLTLQSESSIRLPADFESDYAAHL
AKVFESELRALPHAQDLITTLRARGVPYCVASSSTPEKLRKALGLTGLWPLFEPHVFSVSQVRRGKPAPDIFLFAAKQMG
VAPECCLVIEDSVPGVTAARAAGMPVLGYTGASHIAAGHDARLRHAGALGTVGDLADVNAYVL
>AHV92083.1 membrane transport family protein [Bordetella holmesii ATCC 51541]
MLKPQPMALASAAQCGYRFNTNIGLALAASLNGAAGQTVMALIIGFAVPMANIAAVYGLARHNGNRLLGELARNPLVVST
LLALACNLAGMSLPGPVDTVLGRLGAAAIALGIMCVGASLSWEGGRGHGRLITWMLVVKLLALPLVALGVARLLQMPALE
ARMLLLFTTLPTASASYVLAMRMGGDGRMVAVLLSLGTLISALTIPLWLMAG
>AHV92084.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MRTRLADYVAGATLALFIALLALASPTPAQAAISLTQTR
>AHV92085.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV92086.1 bacterial extracellular solute-binding s, 3 family protein [Bordetella holmesii ATCC 51541]
MKKLSAVLMISALLAACGQSDNAPQASASATSKTQKVVVGLDDNFPPMGFRNEKNELVGFDIDMAREASRRMGVEVEFKP
IDWSAKEAELNGKRVDVLWNGLTITDERKKNIAFTAPYMANHQIILVAVDSPIKTRADLAGHVVGAQDGSSAIDAIKKDD
TVFKSLKELKMFGDNVTALMDLSAMRLDAVVVDEVVGRYLASKREGQYLVLDENFGTEDYGVGVRKDDTDLLGKLDKTLG
DMKQDGTSGRIATQWFGADIIK
>AHV92087.1 transcriptional regulatory protein ompR [Bordetella holmesii ATCC 51541]
MNTQNTTPTRKILVVDDDPRLRDLLRRYLSEQGFNVFVAEDAKEMGKLWQREHFDLLVLDLMLPGEDGLSICRRLRGGHD
NTPIIMLTAKAEEIDRIVGLEMGADDYLSKPFNPRELLARINAILRRRGTEEHPGAPSQENESIAFGPYVLNLSTRTLTR
NGEQVPITTGEFSVLKVFARHPKIPLSRDKLMELARGREYEAFDRSLDVQISRLRKLIESNPSKPVFIQTVWGLGYVFVP
DGGS
>AHV92088.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MPAPFAHSPRGSLATIRTLLPYLWPAGHPGLKARVVLAVLSLIVAKAALVYVPILYKQAIDALSQGTPGALVVPVGLILA
YGGARVLSLLFSELRDAIFARVAQHAIRAVGLQIFRHLHGLALRFHLERQTGGLTRAIERGTKGIQTLLTFLLFNVLPTF
FEIGLVCVVLWKMFDGWLALATGLTVTLYLTYTLIVTEWRAKYRRQMNETDSQANTKAVESLLNYETVKYFGNEAHEAQR
YDASLRSYERAAVRSQVSLSILNIGQALIISAGLTVVMWMAAQGIAQGRYTLGDFVLVNTYLLQLYDPLSFFGFIYREIK
QALIDMERMFDLLGQDREVADEPGAPELHLRGGAIEFRDVVFGYDERRPILKGVSFQVPAGKTVAVVGSSGAGKSTLARL
LFRFYDVKQGAVLIDGQDIRAVTQASLRAAIGVVPQDTVLFNDTIRYNIAYGRPGATLAQVHEAARLAHIHELIMSMPEG
YDTLVGERGLKLSGGEKQRVAIARTILKNPCIFLFDEATSALDSHTEREIQDNLRDVSQGRSTLIIAHRLSTVADADDII
VLGDGLVLERGRHAELLARKGVYASMWARQQESGAPIAI
>AHV92089.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELRHLRYFQTVAREGSFTRAAAVLHIAQPPLSRQVRQLEEELGVILIERGSRGLKLTEAGRFLYEQSLQLTARLDEVLT
GTRRLGAQAARWFSIGFVPSTLYGFVPELIRYLRQADTQVEVGLSEMTTLPQIEALKSGRIDLGIGRIPFDDPAIERRVL
MEEPLVAVLPAAHPLAERSRLSIAELAAQPFVLYPARPRPNYADHVLGLFRAAGHQPTVIQEANELQTALGLVVAGLGLT
LVPTSVQRSNRSDIVCLPVDTPAFSSPVILSWRRGDSSPFLAQAIAAAEGLARQAAVAP
>AHV92090.1 putative amidohydrolase [Bordetella holmesii ATCC 51541]
MTKAIQSLALLDDFFARETPRMTGLADKIWSLAELRYAETASADLHRQALQAAGFRITSEVAGIATAFMAEWGDEGPVLA
FLGEYDALSGLNQQSGALVCTPSVDSPGMAGHGCGHHLLGTSAHFAALAVQEHLRRSGAKARIRYYGCPAEEGGRARPSW
RAPGCSMMWTRR
>AHV92091.1 diaminopimelate epimerase [Bordetella holmesii ATCC 51541]
MHGAGNDFVVLDGVRQTIEMTPERARALGDRHFGVGADQILLVERPTRPDADFRYRVFNNDGSEVEHCGNGARCFVRFVH
EQGLSEKNPLRAEIVSGVILLDESEDGQVTVDMGSTCFDPAALPFDAHGLTQRSQGQDTLYTLPLDGAEVEISTVAISNP
HAVQVVADVATAAVARLGPQIESHPRFARRVNAGFMQIIDRHAIALRVYERGAGETLACGTGACAAVAAGIRGGLLDSPV
RVQTRGGVLTIAWDGAQLRMTGPAQSVFHGQIDIDKLVFSMALNR
>AHV92092.1 sodium symporter small subunit domain protein [Bordetella holmesii ATCC 51541]
MRLIVLLLACWAGLTFVPAYFARQLAFDFIGWPFSFWMAAYGAPLAYLILIVIYALVMNRFDARSRTRRDD
>AHV92093.1 phoP regulatory network YrbL family protein [Bordetella holmesii ATCC 51541]
MLLIPQNLSLPRAGESHFQDIFGPIDLSHATLLAHGGDRYVFEHPHDACLLVKVMDMQARGVYLAKRPLKRWYKQFQRES
AYRVYLNEFSEYVTSATRPSGVWHLPLARILGVSQTNLGLGLLAEKIRNAQGEMAPTLRDLVKQGRYTRQIARQLDQMID
DLAQAHVILHDLSSANIAVGYNADGRQGLYLVDGFGVVPLIPVYAWNQRLNRRRIMKKYAEMRAKLPAPLDD
>AHV92094.1 aldo/keto reductase family protein [Bordetella holmesii ATCC 51541]
MVELREAGLTRSIGVSNFTRENLTLLMEQTGVIPAVNQIELHPDFAQRELRAFHADHGIATESWSPLGQGGATHDPTIAD
IAQRLGKTAAQVILRWHLQSGLIVIPKSVTPARIKANIDVFGFELSSADMQAIDGLSNGKRLGPDPAVYKG
>AHV92095.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MKIHIRAGRVIDPADGSDEVVDLFLADGRILARGQMPEHFRADRTIEATGLAVLPGLTDIAAQLGQHPEQEGRAALSGGV
VRLVLPHATPQQDGMPYCLRLGPLLAPTGGLSDMAGWLDSGCVGIAQGDEPLPGSGLLWRAMQYAAGLNATLWLNPEDAG
LAGGGVMAAGAYATRLGLPGIIE
>AHV92096.1 putative transporter [Bordetella holmesii ATCC 51541]
MLAVARAIIELRRLLIVDEPSKGLAPSIVQNMIAAFEELKRGGTTILLVEQNFGFASQLGDHVAVMDNGCVVHAGSMTAL
AQDDTLQQRLLGLSLGSHQ
>AHV92097.1 succinate-CoA ligase, alpha subunit [Bordetella holmesii ATCC 51541]
MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPKRAGEDFEGIPIYASVKDAKDGTGATVSVIYVPPAG
AAAAIWEAVEADLDLVICITEGIPVRDMLELKNRMRDKGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSG
TLTYEAVAQVTELGLGQSSAVGIGGDPINGLKHVDVLKLFNDDSDTDAVIMIGEIGGPDEVAAAEWAKDNMKKPVVGFIA
GVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIKTTRNPSEMGKLLKSVL
>AHV92098.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MQTFTIRQLTPQDASEFKSLRLAALCEAPEAFESSYEEEQLVTVPDWARKLEPSAARTVFGAWDGSRLVGCAGLMRMGTL
KQMHKAVIWGIYVAPAQRNHGLGRRLLGAALQQAAGWTDVRQVLLTVAQGNPAALRLYESLGFTAYGCEPAALRVGGRYL
DETLMIKRL
>AHV92099.1 3-isopropylmalate dehydratase, large subunit [Bordetella holmesii ATCC 51541]
MAQTLYDKLWDAHVVHQESDGTCLLYIDRHLLHEVTSPQAFEGLTIAGRKPWRISANLAVADHNVPTLNRAQGIEDPISR
LQVDTLDSNCDKYGITEFRMNDLRQGIVHVIGPEQGATLPGMTVVCGDSHTSTHGAMGALAFGIGTSEVEHVLATQTLLM
KKAKSMLISVDGELPFGCTAKDVVLHIIGIIGTAGGTGHAIEFAGSAIRGLSMEGRMTVCNMAIEAGARSGMVAVDDKTI
EYFRNRPFSPVGVLWDQAVNYWRTLHSDEGAKFDTVVRVNAKEIKPQVTWGTSPEMVLPVDGRVPDPDREKDEVKRSGME
RALHYMGLTPNTPLVDIRVDRVFIGSCTNSRIEDLRAAAAVARGKRVAANVRQAMVVPGSGLVKQQAEREGLDKIFVEAG
FEWREPGCSMCLAMNADRLEPGERCASTSNRNFEGRQGQGGRTHLVSPAMAAAAAVAGHFVDVRSYR
>AHV92100.1 efflux transporter, RND family, MFP subunit [Bordetella holmesii ATCC 51541]
MKANSGRFKRYVWIAVGLLAAALLIKWLVFPGAAAPTFATATVKRGDLENSVLASGTLEAVRQVSVGAQVSGQLKSLKVK
LGDEVKQGQLIAEIDDMTQQNELRNAQAALETRRAELRAKQATLKQAEQAYARQRKMLAADASSRESYESAEATLHVTRA
DIVVLQAQIAQAEIEVDKAKVNLGYTRIVSPMDGKVVAVVTKEGQTVNSIQSAPTIIKVAQVGTMTVKAQISEADVTRVH
PGQKVYFTILGEPDTRHYGVLRAIEPAPDSIQRDESTSALTGSSSTSTSSAVYYNGLFDVPNPDEVLRISMTAQVFVVLG
EASQVLQIPSSALGKKDEDGRYWVRVVGKDGQPQERQIRVGMNNNVMAEVLDGLSEGESVVSADSAPMPAGRP
>AHV92101.1 sulfate transporter family protein [Bordetella holmesii ATCC 51541]
MTARSARQDAMAGLSVAAVALPVGLAYASMMGLPAASGLWAAIAGMLGYAVFGASRTLVVGPDTATCTLIAATLTGLSIV
DPQARLAAAAGMAVVVGLGCLLARMFRLGVLANLLSRPVLVGYMAGVAITLACSQLGTLTGAGPRPDDLLRPFEAVTRLI
TRAQPATLILGLLCCTALAAQRVWRPRWPGAIILVAVTCLLSWLLDFPKLGVAVVGDVPAGLPAFTLPEDFRNVPGFLLG
AAGVLLVSFSSGIVTARSFATVSGEEVEANRELVGLGASNLASGLFQGFVVTGADSRTAVSLAAGASSPLASVVAALTLA
VVLSVATGLLYWLPQATLAVILLFAAMHLFQWGAFVQLARISRAELGFAMLAAVGVVIFGVLGGVITAVTATLMYVMYVT
ANPRDALLGRLPGDRALCKLHLNPTAEPVPETVIWLFESSIWFFNADAFRRRARDVVSLAGNARWFILDAEAMTHADADA
VDALFTLKRELQARDTVMMIAGGHGLFRTAMERSGLIEAVGAERVFVSVEQAVAAIERHSVPV
>AHV92102.1 virulence sensor protein BvgS [Bordetella holmesii ATCC 51541]
MFAGGPVGAQTLLDGSNADVPKLNLDLDGEDWHWLADKREFRLGIYAPDYAPFQFTQRPRFEGLNADYLKLISHNLGLIP
VIRLFPDRDSALHALKEGDIDAVDDVAGGPLHGQDFATTRPYLSNPTVAVARRDRGDIPADLGTLRVAVNPRSQPAAIPQ
DASAARWSSYPTPLLGMSAVAYGQADVYLGDPLAVAYYLAAGVFSDMQVLRRDDLGQRANVYTVQRANTRLRHILDQTIA
GIPAVWRQNAIYRWGLPTGAFMPPPPLALTEKEQRWIRRHPVVRVQALNLFPPFSMHIQGDAQLSGLSMDLLQRIGQLAG
LHFQIEGADSSAGMQQALQNHEADMSAGLFWSQNREDVLDFSAPYLSTAFVLVGRQDSPASSAGADFAGLRIASVPGSAA
SDALIQHYPHAELVPASSPNDALLKVLGGQADVAVQTQIAANFYLRNYFRDELRVTAALNTAPARLAFAFARDQDELQSI
VDKALAALPADESIYLMNRWRGESASTINTWYAYRQEIYLLVAAAVVTAAIFLAWVVYLRRQMRQRRQAERALSDQLAFM
RVLIDGIPNPVFVRDRHGRMVICNRSYLDTFQLQAEDVVGRTLLESPMRTDNPAQAARVHEQYLQAMEQEAGGPVFQDLE
LTLRGEKHYLYHWLLPYADSVGRVNGLIGGWTDLTERMRLLHDLQEAKEEADAANRAKTTFLATMSHEIRTPMNAIIGML
ELVLRRPPEQAVDRQALMVAYDSARSLLDLIGDILDISKIEADKLELTPVPTDLRRLLESVVNVFQGMARQNGLSLRLDI
GADQVPAVSIDASRLKQVVSNLVSNALKFTEKGGVTVSMQVRPVEQGLARIEIAVDDSGPGISAADRRRLFEPFTQVHQE
ARADKGRLAGTGLGLAISRRIVQAMGGSFDLSSIPGKGTRIDVQLCAPLLAADVLPAASLPAQICTDAKVARLRVLVIDD
HGPNRMLLAQQLAYIGHDVLDAADGKQGLALWREHEPDVALTDCNMPGMSGYEVAREIRRLEQAHGRAATIIYAITASAQ
TEEFARCEAAGMDGCLFKPLDIDTLQQRLHPLAVRKAEQRPMPFSPTTFRPQELLDLTGADAAMARHIIEELIKTNREDS
AALAQAARIGDNPAVADLAHRIAGGARVVAADQAVAQAHALEAAARQSKGDMQADATVLIQTLASLEADMQAWLAARD
>AHV92103.1 tripartite tricarboxylate transporter TctA family protein [Bordetella holmesii ATCC 51541]
MTEILNNLAFGFEHALTLQNLMYCAIGCVVGTLIGLLPGLGPLSTISLLLPLTYSIPTGGALIMLAGIYYGAQYGDSVSA
ITMKIPHASSIVACIDGYAMNLKGKTGLALFTAGVSSFIGGTVAIIVLATMAPALGEVGLLFGPADYCALMLLGFFCVSF
VSAGNLLNGLAMAMIGVLLGVVGTDVNSGMPRYTLDLVFLQDGIGLISIALGCFGIAEIVKNLDNRNTLTPFNGKIKLMP
TWPEFKRIIPSALRGSVIGSILGILPGGGPTIAQFAAYAADKRFSKYRHEIGTGAIEGVAGQAAADESAART
>AHV92104.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MKVNDAARWFDVSAPWLERKLARKPRLMLRAVDGVSFEIARGETLALVGESGCGKSTVARMLVGLYELTRGSITFDGQPL
SSMQGRGGRRLRSRLQMIFQDPYASLNPRWRVGRIIAEPLLTHTTMTPAEREQRVAELLDQVGLDPADGSRYPHQFSGGQ
RQRISIARALAVRPEFLVCDEPTSALDVSVQAQVLNLMKDLQRELGLTYLFISHNLAVVHHVADRVGVMYLGRIVEVASR
DALFQKPRHPYTRMLLEAIPDLDGTGEPRTAVAGEVPNPLNPPPGCTFHPRCPHADARCKSEAPQALPAGAGVIVACHAV
QEGRLD
>AHV92105.1 hypothetical protein D560_0888 [Bordetella holmesii ATCC 51541]
MTRILHLIVFLVGLAAIGWIGVGYLGSNPLALSVTALIGVCYLAGALELLRYQQATRSLTHALERLSEAPAQLGPWLDVL
PQGLRNTVRLRIEGERAGLPGPALTPYLVGLLVLLGMLGTFLGMVATLRGTGLALESATDLAAMRASLAAPVKGLGFAFG
TSVAGVAASAMLGLLSALCRRARLQAGELLDTKAATTLRGYSLAHQRGESFRLLRSQADTLPLLADRLAAMMASMENQSQ
ALNQRLLDGQQAFYGNTEAVYGRLASSVQTALTHSVAESAQAAGAAIQPAVQTTMQTLARETSAWRDTVTQALQQQMDEL
SRRLEQTSSTLADHWSQALAEQQQANLALNQDLRATLEQFGASFDGRASALLTDVSARLDTTAATLAVSTEQTASGWSAA
LADQLDTALNRFAATFESRSSRLLDDVAARLSSTTDSVAQTTAGVAAIWKAALAEQHAAQATLAQDLRVALEQFSTGFDG
RATDLVARMDARLDGAASGIAAHVQAALGAWQAALGEQRRGQQDAAQGLHDALQQFSASFETRSAALIDGIATRLEGTAR
TVTQGTSDTLQHWQAALAEQAQDQARLSDALRATLQDFCSAFDQRSIGLVDNVASRMDLTTEQLAQAWREALGRHEAASA
SLADAHHVALDAAAERFEAHSAALLATVDQAHGRLHGELATRDEARLATWTESLADVAAALRAEWETTGNRTLARQQEIC
DSFSAAVGAITALADAQSQRMIGEIEHLLEAASQAPKAAAAMVSELREKLSDSMARDNAMLQERGHLLETVDTLLQAINH
ASHEQRGAVDALVASSAELLERVGQRFTDHLEGETGKLGAVAEQVTGSAVEVASLGEALGAAVQTFDQANARLIGQLERI
EAALAKSLTRSDEQLAYYVAQAREVVDLSLLSQKQIMQQLQQRDRDGAQAT
>AHV92106.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MNPGLLYLPASVVCSVTLAVLLKLARRHGVDVRQAILTNYAVACVLCLTLLRPDLNQLLHLPMLPVLAALGLLLPSIFVA
LAQSVRHAGIVKTDAAQRLSLFIALGAAFVLFGEPVTARKAGAIALACAALFCLLRKPAQRDDDGGATWIWPLVVWVGYG
VIDILFKIVARAGAAFSATLLGAFALAGILMLLWLLWRRAAWRGRDLAAGLLLGMVNFGNIYTYIRAHQSLPDQPALVFA
SMNMGVIALGTAAGAWLFSEKLSATNITGLVLALGAIAVMLP
>AHV92107.1 hypothetical protein D560_1710 [Bordetella holmesii ATCC 51541]
MRGLCAAALTLAVMLAPAPGQAHAAPASALSPAAAEMQRLALDAYVYLYPLVSMDLMRRQAISPKTAQLPGHAAANRFWM
QRGQAAGSAWPHADMLRLSAWLDLSAGPVVISVPPTQGRLYTLTLHDLWSDAFATVGKRSTGTGRGNYAVVPPGWMTPLP
AGMQRIGAPTPQVWLRGLLQAGEAGETQQLQDAFILTPLQDWNRGAQSMQLTSDPKLDATTPVAQLLATMPADAFFSYAA
ELLRKTPPHAIDQPMLARLRRVGVIPGQQFDFARARTMACSKPCAMPLA
>AHV92108.1 uvrD/REP helicase N-terminal domain protein [Bordetella holmesii ATCC 51541]
MSTDTPIGHGLNPAQKEAVLYLDGPCLVLAGAGSGKTRVITQKIAYLLRECGYMGRNIVALTFTNKAAREMAERVKPLVD
RKLAKGLTISTFHALGVRLLREEAAHAGLKQQFSILDADDAMAIIQDLLATTDRGRLCEVQSIISLWKNGLIEPDEAANV
AVTPSEVEAVAVYRSYAATLAAYQAVDFDDLIRIPAKLLEHNEEVRTRWQNRVRYLLVDEYQDTNVCQYRLVQLLTGMRS
LFTAVGDDDQAIYAWRGATIENLAKLTTDYPNLKLIKLEQNYRSVQRILAAANNVIERNPKLFEKKLWSDLGAGEPITVS
PMDGDQHEAESVAMKVSASRFERQAQWKDFAILYRSNHQSRILEQALRNLKIPYTISGGQSFFDKAEVRDILAYRRLVAN
DEDDPAFIRAATTPKRGIGQATLQTLGQYAAQRAISLLEASAEEGLEALLQPRQLEPLRTFGEFIRRIQWRAGRGAHGAT
TRAAEPAGALLEDLFAAIQYERYLFDTLEERPAQTRWQNVMELVAWLKRKADEDGMTLFELVQHVALVTMLERGDDEEPD
AVKLSTLHASKGLEYPHVYLVGVEEGLLPHGGRDEEDTDPDNAANNLATRIQEERRLMYVGITRAQRSLHLSWCRKRRRA
REDRVCEPSLFIEEMGLSQPGIKEDAATAALSPKERLGMLKALLQK
>AHV92109.1 hypothetical protein D560_0019 [Bordetella holmesii ATCC 51541]
MFLCSHPNVSKVTRRHGASLAHDKGWAPRPASAARMPTPANALVEERSAPARRAPEEPHAFRVAPETRCRLDLLKLRNIR
YAASPSSGRAHHA
>AHV92110.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MGHLYLHLNRNKRSIVLDLKQEAGRDACLKLAEGCDALLYNIRPQAMARLGLGYEAVAARNPALVYVGAYGFSESGPYAG
RPAYDDLIQGQTGIADLAARQSGELPRYAPLTLADRSVGLHVAIALLSGILRARADGQGQAIEIPMFEGMAHMVLGDHLG
GHTFKPPLGPPGYARLLAPHRRPYATTDGYICLLIYNDKHWRNFFRLIGQPELNDDPRFCDHTARARHIAAVYAFVAEVI
GTRDSASWLRDLDAADIPASRLYGMEDLIADPHLLQTGFVREVDHPSEGRLRTTAPLGHYARTPASLRRSAPRLGQHSRE
LLREAGLDEATIDALMAQHASLDGQP
>AHV92111.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92112.1 NADH-quinone oxidoreductase subunit C [Bordetella holmesii ATCC 51541]
MMTRLETLKNNLQATLGQDIALIEDLGELTLEVPPEQWLAVCNKLRTDAGLRFESCIDLCGMDYLTWGNGCRAQQLEEQG
SAARGRYAVVIHLLSIEHNWRLRVRTFAADDEFPIVASLLECWPGVNWYEREAFDLYGIVFEGHPDLRRILTDYGFIGHP
FRKDFPLSGTVEMRYDPEQKRVIYQPVTIDPREITPRVVREDSYGMGR
>AHV92113.1 microcin-processing peptidase 1 domain protein [Bordetella holmesii ATCC 51541]
MHITLNLGLAGPVIAVFIVAVVVDGIFGIWKAHGTLLKDGLGYDNRLCTLDSNGHFLFLPADRGESRAFFRTRRTGSGLC
APDRRQRCGCRSLRKSGSVGVGTQKRYRNGRADPRPLAGPDGVRRPEPGLGLDLRLLRGGPAPDRRGRLAYRAPYSRRRG
RRPA
>AHV92114.1 branched-chain amino acid transport family protein [Bordetella holmesii ATCC 51541]
MDDHDVYVYSAILLLALCSVITRSGFMLFGDYIPLPASMRRALRYAPVAALTAIVVPDFLPWQAGLGPVFDYKLVAALLG
IIVFLRTRSAVLVIVVGMLALWGLRWLAEQRGQAPPDPRQTPFQTRSGRRCAAALK
>AHV92115.1 sulfate ABC transporter, sulfate-binding family protein [Bordetella holmesii ATCC 51541]
MPSRTAGFWTAAITLAATFTLGLPQAMAQSKQTLLNVSYDPTRELYRAVDDAFIKDYKAKAGVDLTIRQSHGGSGRQARS
VIDGLDADVVTLALAYDIDAVADRGLLPQDWQKRLPQNSSPYTSTIVFLVRKGNPKQIADWDDLLKPGVQVITPNPKTSG
GARWNYLAAWAYALKKPGGSEASARQFVGDLLKHVPVLDTGARGATTTFVERGVGDVLLAWENEAFLAQEELGPDKFDIV
VPSLSILAEPPVAVVDKVVDKKGTRQAAQAYLEFLYTPQAQEIIAKNYYRPIDKTVAAKYENRFPKLNLVTIDDPIFGGW
RKAQKDHFSDGGSFDQVYQPK
>AHV92116.1 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein [Bordetella holmesii ATCC 51541]
MKLRTITAALALAGLGVAGLPAQAQGISDDVIRIGFITDMSGVFSDIDGKGGVEAIRMAIEDAGGSINGKKIELVTADHQ
NKADVASVRVREWFDQQKVDVLIGGTNSATSLAMAQVAAEKKRPFFAIGAGASDLTNSQCSPYTVHYAYDTIALACGTGS
AVVKDGGKSWFFLTADYAFGHALERDTANVVKASGGEVKGQVRAPLGASDFSSFLLQAQSSKAQILGLANAGGDTINSIK
AANEFGVTSTMKMAGLLVFINDIHSLGLEATKGMYLTDGWYWDQSDASRAWAKKFEDKVKRKPSMLQAADYSAVSFYLKG
VKAAGTDDPEALMK
>AHV92117.1 hypothetical protein D560_2824 [Bordetella holmesii ATCC 51541]
MLACGRFYPPQARNPESRLRFYATRFGLVEADAAYYALPSASVTQRWAERTPPGFVFNIKAFRLFTGHQTPKRALPAALL
RDMGWDPTILGRVSTTRSRPNGATNYGGSI
>AHV92118.1 valine--tRNA ligase [Bordetella holmesii ATCC 51541]
MTQAADPKNDTAELSKSFEPTDIESRWYDEWNLRGYFQAGRHVETGTDPQPYCIQFPPPNVTGTLHMGHAFNQTIMDGLI
RYHRMTGDDTVFIPGTDHAGIATQIVVERQLDAQKLSRHDLGRERFVEKVWEWKEQSGNTITSQVRRLGASADWPREYFT
MDDRMSRGVVQTFVELYRQGLIYRGKRLVNWDPKLLTAVSDLEVQSEETDGHMWHILYPFVDGPQTIIDEEGNPVTLRGM
TIATTRPETMLADGALCVHPDDPRYKHLVGKLVELPLCDRNIPIIADDFVDPKFGTGCVKITGAHDFNDYACALRHKLPL
IVIFTLDAHINENGPTQFQGLERYEARKAVVAELEQKGYLVKVEPHKMMQPKGDRTGVVLEPMLTDQWFVAMSEPAPEGT
FNPGKSITEVALQAVADGSIQFYPENWTTIYNQWLNNIQDWCISRQLWWGHQIPAWYAEDGRCFVAHSEEEALELARAAG
VTGPLTRDPDVLDTWFSSGLVPFTTLGWPEKTEDLARYLPSSVLVTGFDIIFFWVARMVMLTMHMTGNIPFKHVYVHGLI
RDADGHKMSKSKGNTLDPVDLIDGIDLEQLVAKRTYGLMNPKQAGSIEKATRRQFPDGIPAFGTDALRFTMAAYATLGRN
INFDLKCCEGYRNFCNKLWNATRFVLMNTEGHALHGTEQGELSFADRWIVSQLQALEADIARGFDDYRFDNIANALYRYV
WDEYCDWYLELAKVQIQTGTPAQQLGTRRTLIRVLEVVLRLAHPIIPFITEELWQKVSVVAGKRIAGHADSVSVQPYPRA
NPAAIDLEAEAEVAELKAQIEAVRALRGEMGLSPAQRVPLIAQGDAALLRRNAPYLAALAKLSQVDVADTLPDAGAPVQV
VGKARLMLHVEVDVVAERARLDKEIARLEGEIGKAAGKLSNPSFVERAPAAVVEQEKARVAQFNETLAKVRDQRGKLGN
>AHV92119.1 degT/DnrJ/EryC1/StrS aminotransferase family protein [Bordetella holmesii ATCC 51541]
MYAADEIAAVADVLRRGQGNAWSGADVAAFEQDYARQVGRPYAVALSNGTVALELALRALEIGPAMTCW
>AHV92120.1 K+-transporting ATPase, B subunit [Bordetella holmesii ATCC 51541]
MLFANFAEALAEGRGRQQAAALRGLRTTIEARVLTGFRDSDAAAALPPYWRSRATSRPSGALRRDDVVLIEAGETVPGDG
QVIAGIASVDKSAITGESAPVIRAAGSDFCSVTGGTRVLSDWIFVRIAADPGDSFLDRMIAMVESARRQKTPNELALTIL
LVGLTLVFLLVVASLLPFSMYAVSASGAGQAVSITVLVALLVCLIPTTIGGLLSAIGVAGMSRMMRANVIATSGRAIEAA
GDVSVLLLDKTGTITFGNRQAAAFVPAPGVSPAVLAEAARLASLADETPEGRSIVALAERILDTRSEAPAGARFVPFSAQ
SRMSGVDLDGRLIRKGAADALARWLGEGQGGLPAAVARDVDDVARRGSTPLVVAEGGQALGVIELKDIVKPGIQPRFAAL
RRMGIKTVMITGDNALTAAAIAAEAGVDDFLAEATPQAKLELIRACQADSHLVAMTGDGTNDAPALAQADVAVAMNSGTQ
AAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGALTTFSVANDVAKYFAIIPAAFMAVYPQLAQLNVMGLATPASAILSA
VIFNALIIVALIPLALKGVRYRPLGAAVLLRRNLLVYGLGGLLAPFAGIKLIDMALAALGWT
>AHV92121.1 putative substrate binding protein of ABC transporter system [Bordetella holmesii ATCC 51541]
MKRILTAVLTSVALAAPAVAADLVVAHVYDKTGPLEAYAKQTHNGLMMGLEYATQGTMAVAGRKIRVIEKDNQGKPDVAR
AQLASAYADDNADLAVGPTSSGVALAMLPIAEEYEKILLVEPAVADSITGEKWNRYIFRTGRNSSQDAVANAAAFDQDGT
SIGMLAQDYAFGRDGVRAFKGALKHAKIVHEEYLPANATDFSGGAQRLFDALKDKPGRKIIFVLWAGAGNPFKIADLDPK
RYGIEIATGGNTLAAMTPLKSLAGMEGATYYYYGIPKNPINDWLVAEHQKRYGQPPDFFTAGGMSAGIAIVEALKKTAGK
SDTDTLIKAMEGMSFETPKGKMTFRPQDHQAMQSMYHFRIKNDPSVPWAEQELVREITPEQMDVPIQNKR
>AHV92122.1 NMT1-like family protein [Bordetella holmesii ATCC 51541]
MKTFCRTAIAVFLSGFASLAAAVGPQPAPAPQKQTLNVGYVKVGHLSPMIFIAEPLKACNVEVNPVEFVRYADARTALLS
GSLDVSGIGPADLAIALAQGSEKIVGLSGVASSPKHLVTRKGVKMDDWKDLAGKRVGIAPGSAVWFQWAATLAEKGIPYN
SFTAVNIQGGGTAFVQALQRGDVDAVALWEPFESQLVANGTAFFANNLEYSQSKAVGAELGLLAATRDALTSKREAVKCF
LWAYKQAEEKLAKDPEAFAEAYAKYTNLPLPVTRESAKLIKLGGVLDLGQLQRQAKTFHDLGVIPKDVSGQISKVWDPTL
MREVQ
>AHV92123.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVEKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV92124.1 aminotransferase class-V family protein [Bordetella holmesii ATCC 51541]
MIRSKLPDVGTTIFTIMSRLAIDHQAINLGQGFPDFDPDPRLLDLVTRAMAQGHNQYPYMPGVAPLRAAIADKVAALYEH
RYDPETEITVTSGATEALMATVLAAVGSGDEVIVIEPCYDSYLPAIRLAGGTAVPVPMRAPTLNDPHYRIDWQRVRDAIT
PRSRLLMLNFPHNPTGAILDDSDLDALEAIVRDTGILLLADEVYEHIVFDGKPHASIARRPLLAEHAFVISSFGKTYHAT
GWKIGYCCAPRQLSAELRKVHQFMVFTVSSPMQFALAEFMADPKPYLELPAFYESKRKRLAEGLAGTRFKALPSPGTFFM
LADYSEISRQNEADFARSLTVDYGVTVIPVSAFYRNPDAPESNHGLVRFCFAKKDTTLDAAIERLSQV
>AHV92125.1 hypothetical protein D560_2157 [Bordetella holmesii ATCC 51541]
MQKSRLAAGFFAFCPGVRIGADEASGQAGKIMHDSMAR
>AHV92126.1 asparagine synthase [Bordetella holmesii ATCC 51541]
MCGILGSWQFDAQARGDAEDALARALPLIRHRGPDDIGTATIPTAAGRLLFGHTRLAIIDLSAAGHQPMIRGPLSVILNG
EIYNYRELRQELRGLGHSFSTDTDTEVLLAAWKQWQQAALRRFTGMFAFALHDARDDSLTLARDAFGIKPLYYSLDGRRL
LFGSEIAPLRALDPGLLRLDWQRACDYLSYGRYDCDERTFIQGISQIEPGCLIRYHTQDGVQPARWWTPGTTATWRGSFA
DAAAEFRERFLDSVRLHLRSDVPVGAALSGGLDSASITCAMRHLEPDIPLHTFSYIAGGPQSEAKWAQLVNQHCAAQAHE
VRVDTADLERDLDALIAAQGEPFGSTSIYAQYRVFQLAREHGIVVTLEGQGADELLAGYSGYPVERLSSLLESGHPLQAL
AYAGRQARLGRQPLRLLMQSLATVSGKWGHEALRRRAARWPAWIRGRLLAEAGIQARPLLPSQRQGPRGRRLMQAQARAL
AGDGLGALLRHGDRNAMHFSIESRVPFLTPDLADFLLSLPEHYLVSARGQTKTLLREAMRGIVPQAILERH
>AHV92127.1 hypothetical protein D560_2905 [Bordetella holmesii ATCC 51541]
MIDVAQNVGKQWSWVALRGVVAVLFGFLAMFLPGLTLAILVMVWGAYVLVDGVFALIAGWRIRDQHKPLWPLVLVGITGL
AAGIVTFLWPGITALMLLYVIAFWAMVSGVFQIIAAIRFRKAMRNEWLHGLSGLISLVFGLMLVMQPGAGALALVWVIGV
YAVFFGILLLALAVRMKRHAG
>AHV92128.1 phosphomethylpyrimidine kinase [Bordetella holmesii ATCC 51541]
MSPTSASAQERRIPNALTIAGVDPSGGAGILADVKAMSALGAYGCAVIAALTAQNTQGVTGILPVDPAFVGLQIDTLFTD
VRIDAVKIGMVGQEPVIRVVAEKLARWTPAHVVLDPVMVAKSGDLLLERGAVGAMRESLLPQATMLTPNLPEAGVLLEER
PVETIKEMRRVAEKLRNKLAYSGQRWVLLKGGHLPGNETVDLLHDGDRMLELPGRRIDTANTHGTGCTLSAALAALLPQI
GDVPEAARRAKTYLTEAIRHADRLSVGSGHGPVHHFHAWW
>AHV92129.1 putative serine dehydratase domain protein [Bordetella holmesii ATCC 51541]
MLGHQPDRGWIITDGGWMAMSRDRGTARQPVDQGYGLVCDRLGRPISGLRMSDANQEHGVLSIEQGAVADLVAAYPVGTL
LRILSNHACATGAQHPRYHLVRQGGDRIEGIWARFAGW
>AHV92130.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MTVITQANLQDPSHAQAVLDLLDEYARDPMGGSQPLPAYTRSNLIGALARRPGTHVLLAWSQEQPAGLAITFEGFSTFAC
RPLLNLHDFMVSARFRGQGVGRKLLSALDDLARELGCCKITLEVLQGNEPARALYSQAGYEGYTLDETTGQAQFWQKKLA
>AHV92131.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MFKREAGVDVLHIPYKGTTAALTGLIGGDVDLMVESLPAAKPHIDSGRVKVIATGSAKGLTGYPEVETVAKYYPGFNATT
WVALMTPKGTAPGVLDKLHASTQAVIKTDRLQKLFRENAAEPMVLSRAQSHDYIAGEVAKWKGIIKQGNISAD
>AHV92132.1 diaminopimelate decarboxylase [Bordetella holmesii ATCC 51541]
MTAPSSQPQLAGHPHFHYKHGVLHAEGVALDILAAKLGTPLYVYSRAALHAAYDNYRQAIGERPVLVCYGMKANSNLAVL
KEFARLGAGFDIVSGGELKRVLAVGADPAKVVFSGVGKQEWEMRDALAAGVKCFNVESTAELQRLSKVAQAEGRIARVSL
RVNPDVDAQTHPYISTGLKENKFGIAIEEALQAYQTAASLPGLQIVGVDCHIGSQLTDVSPYFDALDKLLDLIDRIGGHG
ITIEHLDLGGGLGIRYTDEIPPSPKTLLDEVFKRLQARGHGHLHVVLEPGRSLVGNAGVLLTTVQFLKHNEARNFAIVDA
AMNDLLRPTLYQAYHGIQAVVPRQAEPQCYDVVGPVCESGDWLGKERNLAIEQDDVLAVESAGAYGMVMASNYNTRPRAA
EVMVDGEHYHIVRQRETVEDLLKGESTLP
>AHV92133.1 hypothetical protein D560_1947 [Bordetella holmesii ATCC 51541]
MNAADLYALGERFDQNRVLLCFNGPISRSLIEEIGNALKNYLSAEHARPAEAMDVFSVYIEMVQNIRQYAAANDAAEARA
TVVIGRGGENRYEVSAGNLVRSEDGQALVRRIAELATLDKAALKAAYKAQLHKPRDPGAASGAGLGLIDIARRAGAPLRA
SLSPSAQQGWDFFSLSVEI
>AHV92134.1 ssrA-binding protein [Bordetella holmesii ATCC 51541]
MSIIDNRKATHDYFIEDRYEAGIVLQGWEVKAIRAGRVQLKESYVIVRDGELYLLGMHVSPLATASTHIHPDAVRTRKLL
LKAEEIHKLIGKVEQRGFTLVPLNLHYKNGRIKLDFALGRGKKLYDKRDTAREKDWERERERVMKHDTRRRDD
>AHV92135.1 YXWGXW repeat family protein [Bordetella holmesii ATCC 51541]
MSMALLACAMPVHAQVSYDPAPAAAAPASADPASANMAAVSVSDQPPPALPVYQQPPVPGDGYIWTPGYWARNPYGFYWV
PGAWVVAPYVGALWTPGYWAFDLGAYRWHAGYWGPHVGFYGGINYGFGYLGVGYVGGYWRNRAFFYNQAITNVRPGRVTN
IYVHNVTINNYDKRRISYHGGPGGIDRRPTPQEDAARGDHRTPASRDQMDHARWAGNNRGQWAGRGDGPRQTVADAPIGG
PRAHMRWNSDDYRSPGKPGNGPSGAAVTDNRPDGARPSGGRPIVAARRQALDLKATCGQTTAIGPRWDLGRTRQSTDGRQ
STDGRQSP
>AHV92136.1 hypothetical protein D560_1565 [Bordetella holmesii ATCC 51541]
MFELAQLIQFDFALDIGFNVIDVTLRTAQQMADGAGDFGKAFGSQHDQRHDANYDQFRKADIKHASAAWLDQAG
>AHV92137.1 azurin [Bordetella holmesii ATCC 51541]
MKALILGLTAICVSGAAHAGDACSIDVEGRPGKKFSPDHIVVPAQCEFFSVRLVHVGHNSKEKAGHNWVLTRSEDTDSVM
LDGMRAGASTDWLAPGDARVVAKTPMLGGQETATVTFPVKRLAAGQSYTYYCSFPAHAEKMRGTLVLGH
>AHV92138.1 tRNA synthetases class II family protein [Bordetella holmesii ATCC 51541]
MKSSEIRQKFLQFFQSKGHTIVPSSSLVPGNDPTLLFTNSGMVQFKDVFTGKEKRPYSRATSSQRSVRAGGKHNDLENVG
YTARHHTFFEMLGNFSFGDYFKQDAIRYAWELLTTVYKLPVEKLWVTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGAR
YASDNFWQMGDTGPCGPCTEIFYDHGADIWGGLPALPKRMAIAISRSGTSYSCSSSVMRPGP
>AHV92139.1 cyclic nucleotide-binding domain protein [Bordetella holmesii ATCC 51541]
MLSGLVKVSVGNAEGKVASLTGVPAGGWIGEGSLLKREVRKYDVVALRDSVVARLPAATFDWLLDTSIPFNRYLLHQLNE
RVAQFIGKAEHDRLLDPDARVARCLAELFNPLLYPGMGMRLAITQEEVGYLARVSRQRANQALGKLEEAGLLKVEYGAVR
VMDLDGLKRYGADAAAVDEE
>AHV92140.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92141.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV92142.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MCVACVIQFFVVHPPSVLVQSAGVYGYSLIHATLNTVLPVFMMMWAVALVGAPTASLLGMLGPVSVLFLAAWLLAEPITV
WQLAGTALVLAGVFVLTGRRPAKAG
>AHV92143.1 zinc-binding dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MQSTYRAMQVTQPGFLELVEHPTPTPGAGEVLIEVDACGICGADVGDIDGADPTLQPPRVPGHEVVGRITALGAYVPSIW
KIGQRVGIGRLGGPCGECAQCRQGHFQLCQNQPFVGATCDGGYAEVMLARASGLVSIPDELHAEEAAPILCAGIATFNAL
KKCGAQAGDTVAILGIGGLGHMALQYARRMGFRVVAIGRGSDIANDTLDLGAHIYIDTNEEDAAAKLKAMGGAQAIITTI
GAPAVVSPLMVGLAPQGRLVLLGAGKDPLPVSAGHLVVGERSVLGSITGSPWENEKTLDFSVLAGVRPKIEVMPFEQANE
AYQRMKSGNVKFRMVLTVGGPRSTEIA
>AHV92144.1 cytochrome c family protein [Bordetella holmesii ATCC 51541]
MALASAGASARSDLSAADTERVQRITAATSDFSAAEPFETMQAGAATIKKLINADIFSHASANLSFEGRQQFLVGNGLFR
KDWVSAPSSTQASDGLGPLFNARSCQGCHVKDGRGSVPGFDPMERTDAVALLLRLAVAAVPAAGQPALSTAELASLPDPV
YGTQLQNFSVAGLPSEGRLEVDYTPVTVPLAGGETATLMKPAYRIEDLGYGPMQPGVQLSPRLAPPMIGLGLLEAIDEQD
ILANARADKGDGIRGKPNWVLDLRTGKQALGRFNWKAGQSTVEQQSASAFSNDMGLSSPLFPSHYGDCTAAQQACAQMPH
GAQAHLGEHEVPGRLMDFVTFYSKNLAVPQRRDADDARVLAGKKLFYQANCIGCHVPKYVTRRDASQPEHQFQLIWPYTD
LLLHDMGDGLADGVSDGQASGREWRTPPLWGIGLTAQVNPSATYLHDGRARSLLEAILWHGGEAQAARDRVVEMTPAERA
DLIRFLESL
>AHV92145.1 SCP-2 sterol transfer family protein [Bordetella holmesii ATCC 51541]
MLPFSVLPTPTRFALRALNTLLDREAWARDRLARHSGKTLRFALGGFGAALTIDSEGHLQQADPAIVPDVTLSAVPERFN
LLRFLPGSDKPDLAELTHISGDAALAQVVADLARDLRWDAEDDLARLVGDIPALRLISGAKALVQGARQAADRLAGNAAE
YLAEESGVLAGRPALEQWRLDQADLERETDRVARAIAALQGRLAGMAARGAHP
>AHV92146.1 primosomal replication protein n [Bordetella holmesii ATCC 51541]
MNQLQLSVRVLECEPLRHTPAGVAALEVLLGHESEVIEAGHPRRVELTIHAVALGDLAQMLAGIALGTEMQVEGFLAPAR
KDSVKLKLHLQRARKTGGSAGVDPMLA
>AHV92147.1 tonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein [Bordetella holmesii ATCC 51541]
MAYSWSDVSKRLDPGVTFNRQNNSINIRGLDQDRVLTRIDGIRLPFLDDGARGVKGGLEAVDFNTLSRLDIVRGADSTKA
GSGALGGMADLHTLDPSDLLRDDRNFGALAKIDYDSADTSRGANAALAGRLQENTSWLIQAGARAGHALDNRGDVGGYGP
KRDEPTPENYTQQNFLAKLQQKIDGGHRFGLTGEYFKRKGTLDNMYEQGPGTSYLIGGNSTVKTTKRERVSLDYQYTAPT
AGGLIDSATADIYWQRVTLDNALDGQRSVDSRASIIPRDPYLYGYPSGAYGRSNSIREALFGVSGEASHRFEGTVAQRVT
LGGEWMGNRTQQYSDGYDNCPAIPSGMRAPFGPRLCDLLHTNQADMPHVKGSQFAFWAQDEFSFADGRYTLTPSLRYDHY
EQKPQSSDGYDSNANSQGTLPPSSSGGRFSPKLLGTWKAQEQVTFYAQYGFGYRAPNASELYTNYGGAGTYLRVGNPYLK
PETSKGWELGTKLGDEALGGALSFFDNRYQNFIDKNVPIDASSLQWQPGWAGQYPLGVTGIVNRDRVRIYGAEASAHWKF
APNWRTWGSLAWAVGKDQGTGQYLNSIPALKAVLGLGYARDQWGVDATLTAARKHNKVEYPDASSATPYPDFQAPGYGVV
DLMAYWRPATVKGMQVQLGVFNLFDKKYWEAINVPTAGATAIARPVDWYTEPGRSVRLSLTYQY
>AHV92148.1 autotransporter beta-domain protein [Bordetella holmesii ATCC 51541]
MPPALPDLAADGRPAAPVPSAGYAKTAPSHFASAPGRAFNADHDRVLNLVNLKPAHDAGLSGSRVKVAVVDTGVSLDHAL
LRVNTRHGGDYQANGTRSAANRANQGEHGSSVALVLAGRPTASYRGGVAPDADLYSANIATAADRVSDGGAFHAWKDLLG
HGMTIFNNSFTTDGPDGERRVKQDQMEYQQAADKSQTQIGKLHELVKGGALLVFAAGNGSNVSGRGYQEVGSLGRTPLVE
PELQKGLLVVTAVDKFGDLERWSNRCGQARRWCLAASSQAYLPGIKTHDPNFFRVHQGTSLAAPQVTGAAVLVKQRFGWM
DNDNLRTTLLTTTQDKGRPGVDADYGWGLLDIGRAIEGPAKFAFGDFVANVQGQSVFGNDISGAGGLTIDGPGLLTLAGH
NTYAGATVIRQGTLDVLGSIRSGTTVLEHGTLVGRGSVGAVDNHGTVAVKESGLTVNGDYHQHAQGRLVTDIGSALNVAG
KARLAGQLHVEGIRPGYVVAEGSVHTVVKAASIEGRFDTLTRAPNLLLQAQLDYQPQGVGLAVRRAASVEAVARRLPSGA
DRVSVVAGARHLDAAMHALDALPQKQRQTTSAAASIARIQYAQNGIALRNSLYSLSGSIYANASALVTLGQSQWSDILQS
RIALASPGGQPLAEYRRGRLRWQPPGLDGHQRNNGLLAGITHEISPQLSVGAALAYDQGNWRESATAGAGSNAKATTTAA
LLGARRSWDSGWFVQTGLSYGHYRNRVERQLVLADVRQRAAGLARGQLWHAELGAGRRWQAWPGVGLTPSAGVAVSHLRQ
RRFRETSASGLGLHAAGLHRSVPTLWAHLQGDHALADAFALQWHLALHHDTRERRYAPRASFDGLGDPQDVSGHWPLPRT
RLSLGLSAHAHLADGLALRLRYTGQAASHWRDHHVGAALTYRY
>AHV92149.1 2-methylcitrate synthase/citrate synthase II family protein [Bordetella holmesii ATCC 51541]
MSTSQKKAAPAAAQTEEKAGFKPKKSVALSGVVAGNTALCTVGRTGNDLHYRGYDILDFADTAEFEEIAHLLVHGKLPTK
AELKAYKEKLRSLRGLPAHLQTALESLPAASHPMDVMRTAVSVLGCVLPEKDDHNTPGARDIADRLMANLGSALLYWYHY
SHNGRIIDVQTDDDSIGGHFLHLLHGQKPSDEWVRAMHTSLILYAEHEFNASTFTSRVIAGTGSDMYSAITGAIGALRGP
KHGGANEVAFDVQKRYDSPEEAEADIRKRVDNKEVIIGFGHPVYTISDPRNKVIKEVARKLSKKAGSTKMFDIAERLETV
MWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTAGWSAHIIEQRIDNKIIRPTANYTGPENLKFVQIEKRK
>AHV92150.1 zinc-binding dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MAEQSASVNRRILLARRPRGEPLESDFRLVTEAVPRIGPGQVLLRTVYLSLDPYMRGRMSDAPSYAKPVDLDQVMVGGTV
SRVAASQHPDFEVGEWVLGQSGWQDWALSDGHGLLSLGRDPQQPSYALGVLGMPGYTGYMGLLDIGQPQPGETVVVAAAT
GAVGSVVGQVARLKGCRAVGIAGGLEKCRFAVEQPGFDACLDHHSPDLADMLAEVTPDGIDVYFENVGGKIFDAVMGRLN
PRARVPVCGLISTYNATELAPGPDRVPALMGTILRKRIRMQGFIIMQDYPDGFIPFRQVMSRWLEQGDVKYREDRIEGLE
AAGRGLIGLLRGENAGKRIVRVGDDA
>AHV92151.1 succinate-CoA ligase, beta subunit [Bordetella holmesii ATCC 51541]
MKIHEYQGKELLKQFGVPVPRGIPAFSVDEAVAAAEKLGGPVWVVKAQIHAGGRGKGGGVKLARSLDEVRQLASQILGMQ
LITHQTGPQGQKVNRLYIEDGADIQKEYYVSLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEYIDPIVGLTDVQA
KKVADSIGLPADSTAQAVDVFKKLYQCYMDTDASLVEINPLNRDSKGNIIALDAKFNFDSNALFRHPEIVAYRDLDEEDP
AEVEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATAEKVTEAFKIMLKNKGVKAILVNIFG
GIMRCDVIAEGVITACRAVNLSVPLVVRMKGTNEELGKKMLAESGLPIISADTMAEAATKVVAAAK
>AHV92152.1 hypothetical protein D560_2455 [Bordetella holmesii ATCC 51541]
MPGSSGQCRHRLRPEAIALLLHDVPVIGVRTPGGTLSLRYG
>AHV92153.1 exodeoxyribonuclease VII, small subunit [Bordetella holmesii ATCC 51541]
MASTSLPQDFETALAELEALVQAMENGSLPLEQSLAAYRRGVELTRICQDRLSQAEQQVKVLEGELLRPLQPGALDDE
>AHV92154.1 hypothetical protein D560_2645 [Bordetella holmesii ATCC 51541]
MSLDASCQPVMGCTRLLADKPQAQLLRGGKRKRKNVPGTDIPNDIDDAAA
>AHV92155.1 virulence factor BrkB family protein [Bordetella holmesii ATCC 51541]
MVPGAIVRAAPAYGAVGSLMALLLWIYYSAQIFFFGAVVTRQRALRARRVEGEAAAAASA
>AHV92156.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MRLRDLTGLPLLLPSDSHGLRALVNNGFARFNERPDLVAEIDGLDVLMELVEAGLGATIQPGAATVRLRGAPLATRQIRD
RQLARSNLLVSLSDDELSPAALAVRVLLAQVAADLVRAGAWPGATLHKS
>AHV92157.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MTEIGIPCWTDHREALQVGSCGRVDEENFELAVLDVCDRPVPAGQVGEFAVRPRHPWTTMQGYLGMPEQTVQAWRNLWFH
TGDCGYVDQSGAVYFVDRAKERIRRRAENISASDIEAAALLHPDIVESAAVGVDSGFEGDDDILLCVVPRPGVSMDYLAL
LRFLMAQLPHFMMPRFLCQMTALPRTVTGKLQRVSVKNTALSLELWDRKREGVNLRDLMDRPNAAEDARPAV
>AHV92158.1 peptidase M23 family protein [Bordetella holmesii ATCC 51541]
MRFAAGLLGLAVAAWLPQAAQAASGDLASRQTEAERQQAALRNRIDVLQKTLDEREAARKEAADALKQSESAISSINRRL
RELADSTRLAEGDLTSLEKQIVSQTEVLHQRRTQLAGQLQAQYTSGLSPWTELLSGGDPQELGRNLGYLEYVSRARTQAV
TEVRRDIDRLAALQKRADARRADLQQLTTETSNEKTALVQQQKERATLLAKLEGQIEAQRAEASRLGRDDQRLTHLIDDL
GTAIARQAEEEARRRAEEARRRAEEARKAEEARKAEEARKAEAARKAEETRRVEAARKARQAATDARRSQDAQEAARVRE
QAEAAQQRERRAAVVADPEGAGLKPAEGSHPRLVESREPVAPKPVQPSRQEVEKPATEPQAPVARTAQATHDDARPLVGG
GGGLRKGLPAPVRGQVQGRFGVSRPDGGVWRGIVFRAPEGTAVKSVAPGTVVYAEWLRGFGNLIIVDHGQQYLTVYAYNQ
SLLKRVGDRVATGDTIATVGATGGQVESGLYFEIRHSGAPVDPAQWLAQ
>AHV92159.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MEASAHSDTFARDNLPPAQQWPQLLLDQPDTAYPARLNCAVELVDAMVRQGHGERIALRWPDKSGQGSMSYAGLQALTNR
IARVLVEDMKLAAGNRILLRGPNNPMMAAAWLGAIKAGLVTVPTMPLLRAKELKQIIDKAQVQAMLCDVRLKDEALDCQD
AASDYFCPTLKQIVLFNDDAPDALDRLAAGKPEHFAACDTAADDVCLIAFTSGTTGAPKGCMHFHRDVLAMCDLFPRHVL
RPGPEDVFCGTPPLAFTFGLGGLLCFPLRVGASTVLAEKLTPESLLQLIQDFRATIVFTAPTFYRQMAPLTSRFRLDSRQ
KSVSAGEALPDATRQLWKRATGIEMIDGIGGTEMIHVFVSSPPESVRRGAIGRVVPGYIAQVVDDDMQPVPHGTPGRLAV
KGPTGCRYLADPRQMKFVQQGWNLPGDTFVQDAEGYLYYQARNDDMIISAGYNIAGPEVEDALMRHEAVAECGVVGMPDD
ERGQVVAAYVVLKPGCADSPQMAAALQAYVKESIAPYKYPRVIRFVVALPRTETGKLQRFVLRQLASGGR
>AHV92160.1 hypothetical protein D560_3245 [Bordetella holmesii ATCC 51541]
MALRTIRQSDLYHRRVSWMRNEKRGYLAAFYLPMFCVQLSADIKHH
>AHV92161.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHHGIGRAVPISRLNLDEYNLLTVHS
>AHV92162.1 smr domain protein [Bordetella holmesii ATCC 51541]
MRGNKTGLADLKRLHEQVRETRARAEAAEREAAARASAAAPEADVAAFRRAVQAATPLKPSGRLANRRPDATPATATAAA
VASRRAAALGEAAPRADAGVSDASDIGALLTDGGTAYVRAGVAPDTARNLKRGQWRVGAELDLHGLRVEQARHAVLSFLD
ECLEHGIRCVRIVHGKGYGSQGLEPVLKDKARTWLVQKADVLAFSEAPERGGGAGALLVLLRQAEAGGRP
>AHV92163.1 uracil-DNA glycosylase, 4 family protein [Bordetella holmesii ATCC 51541]
MARPAPLARPEAQPLRPVVTSRPQAEEAADVSAAGNAGIDVARRVASQDLQQLEREVFACTACGLCQGRKHAVFGEGARP
ARWLVVGEAPGEQEDRRGLPFVGRSGQLLDAMLASVGMSRERDVFIANVIKCRPPGNRNPKPEEIAACSPYLMRQIDLIE
PDRILVLGRFAAQTLLGTDATIGNLRGRRHTLKTEQGRDIPVVVSYHPAYLLRSPSEKARAWQDLQLALRDD
>AHV92164.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MEKRVVFGHKTLPYLLLAPQLIITVVFFFLPAGQAMWQSMRLEDAFGLSSEFVGMDNFVELFSQQAYLDSFKVTAVFSVL
VAFVGLSVSLLLAVMADRVIRGAGMYKTLLIWPYAVAPAVVGVLWLFLFSPSVGILAVALRSLGVDWNPRLDGTQAMILV
LIAAVWKQISYNFLFFLAGLQSIPRSLIEAAAIDGASPARRFWSIVFPLLSPTTFFLLVVNVIYAFFDTFAVVDTTTQGG
PGTSTAILVYKVYSDGFRGLDLGSSAAQSVVLMVIVVMLTVVQFRYIDRKVQY
>AHV92165.1 M61 glycyl aminopeptidase family protein [Bordetella holmesii ATCC 51541]
MQQPDPQGQRLSLPAWIPGSYLIRDFSRQIETLSARAGTSPVAVVKTDNHSWQLAPCTGPVVIDYTVYAWDLSVRGAHLD
ESHGFFNGISVFLRVHGQDDQPCLLDLAPPPGIADWKVYTSLPQAGARRHGFGRYQAPDYDALIDHPVEMGTPQVARFTA
HGAEHELVFTGVAPRLDLARIAGDVQKICETQIAFFEPRTRRAPFLDSASRYVFMTMITGDGYGGLEHRASTALMAARKD
LPVLGQQGQGEGYRSFLGLVSHEYFHTWNVKRIKPAAFAPYHLQQPDLTRLLWIFEGFTSYYDDLLLLRCGLIGRTDYLG
LLSKAITGVMRSPGRHKQSVAESSFDAWTRYYKQDENSPNALVSYYTKGSLVALGLDLLIRRQTQGQRSLDDVMRTLWQR
YGRDFYRGRPQGLGEEEFPALVRDATGVDARRFIQRYAYGRADVPLAELLAPQGIAVRWKTASPIPSMDVRTRKQGDSLV
LATVFEGGAAHRAGLSAGDVLVAIDGLKVEAASGLDVLLSQYRPGERVLVHVFRRDELRVYRLRLSAPQALDCVLSDAA
>AHV92166.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKCLTKPGLAVSQVIDRIMREVDNL
KKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFPKVHLSLAEGSPAQLAEMVLHEQADLALATESLALTPGLAT
LPVYAWEHTVVVRPDHPLADLKSSEAKRLSLAQLAEYPIVTYDRAFTGRSTIDEVFANQAIHPDIVLEAIDADVIKTYVD
VGLGIGIIAGVAYDPRRDSNLVGLPVGHLFGTHTTRVGVKSGVFLRDYVYTFLEMLAPSLTRQVVTEAVQGLPR
>AHV92167.1 septum site-determining protein MinD [Bordetella holmesii ATCC 51541]
MVTSGKGGVGKTTTSASFSSGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKHLENLFV
LPASQTRDKDALTQEGVGKVIEDLKEMGFDYIICDSPAGIETGALLAAYYADDALVVTNPEVSSVRDSDRILGILAAKSR
RAVEGDEPVKEYLLLTRYNPKRVIDGEMLSLGDIEDILRIKMIGVVPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVAR
YLGEERSLRFTEYEKPGFLKRLFGGK
>AHV92168.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MLDARLPPGSANGMDSYNYLLGTDGQGRDLYSAILYGLRISLIVGVGSALIAAVIGTLLGLLAAYAGGKTDTIIMRLVDL
ILSFPSILVAMMILAYLGKGVGNVVLTLVILEWAYYARTARGQALVERRREYVEAARCLDIPNWRIMLRHILPNCLPPLI
VIATLQIARAITLEATLSFLGLGVPVTEPSLGLLIANGFQTMLSGQYWISFYPGIALLVTIVAINLVGDRLRDVLNPRTH
R
>AHV92169.1 hypothetical protein D560_2340 [Bordetella holmesii ATCC 51541]
MVAGLSAVVVGADRLGNIPDLLKGHNISITHHISGRDPSHQKKTLQLPSGTQLVILLTDFLGHNVMKTFRNAAQRGGIKV
VACRRSVCSMQQALQQCGLCNQGCEKKMTRH
>AHV92170.1 hypothetical protein D560_1338 [Bordetella holmesii ATCC 51541]
MQVGTTQQAGSELHAWRQFLGRTTLWLAVLLLGSGVICWVAANWPGMTVIRRFTLAQGLLTISVLLSVWLALRLRGTERM
RQRAAGAVLTLSGLLLGALLALLGQTYQTGADTWELFAWWAVLMLPWALAAGTQILWLLWCLVVNAALALWIGEHLLVWW
EQLSDPAFIALVMALANLIMLGIWEAVVRWRHIQTRVGPRVLAFLALTALVLPLLLGDVFIGGQGKVTGLAVKIQ
>AHV92171.1 aconitate hydratase 1 [Bordetella holmesii ATCC 51541]
MADAAHALGRDLLAQPYVIRILLENLYRHQKWGDAISDAEIARLWDWRDHVGADLALHVARVILPDSSGLPVLQDLAALR
DAVAQGGSDAARVDTRIPVDLIVDHSLQVDHWGDSQAVSLNLRREFERNDERYRFLKWAQQAFRGLRVIPPGMGIIHQIN
LEYLAPIVATRERDDGCWVYPDFVIGGDSHTPMVNALGVLGWGVGGIDAEAALLGQAYTFPVPEVIGVRLKGSIRPPALT
TDAALLITQRLRAAGVTGRMVEFFGPAVAHLSIPERATIANMAPEYGATCGFFPIDAQSLDYARMTGRPQAQVQLIEDYA
KANHLWRDDGTAVPQYTRILEIDLSEAVPSMAGPRRPQDRMPWSEVPEDFHRRLTLPLNEGGFGVDAAPTTGQALTHGSI
VLAAITSCTNTSNPAVMLAAGLVAKKALALGLTPPAWLKRSLAPGSRAVTRYLQDAGLLEALQAQGFEVIGYGCTTCGGK
SGPLTAQATEAISQQGLVTAAVLSGNRNFEGRIHKLVRANYIGSPAMVVLFALAGRIDIDFEREPLGAAQDGRPVYLADV
WPTPQEIQALLPCAANPDIFAQVYAPESLDSAIWRELQAPGGLHFPWDPASLYLVEPPFFKDGPDHPLQDLARSLQNARV
LAVFGDSLTTDHISPSGEIPADTPAGRYLSDAGLTPRDFNTYVARRCNHHVMTRATFGNIRIKNELVPGTEGGFTRHYPE
GTPATIFDAAQHYRRQGTAAIVLGAKDYGMGSSRDWAAKGSALLGVRAVIAESFERIHRANLVGMGVLPLDFEPTEGWRE
LGLQGSEQFALHNIEAGIMHGEPIEVIAQAPDGQVTRFTVRAQVLTEAERQLMAAGGIPASVLHSFLNEPAANPA
>AHV92172.1 acetyl-CoA C-acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MPFEPIYVVDGARSPFLKTRTGPGPFAASDLALQAGRALLLRQPFTPADLDEVIIGCAAPSPDEVNIGRVIGLRLGCGHR
VPGWTVQRNCASGMQALDSAIANIQLGRSQLVLAGGTDALSRSPVLFSSEMASWLARWFAARSMGARLSLLGKLRLRYLA
PVIGLLKGLTDPVVGLSMGQTAENLATRFGISRSMMDAYSARSHERALAAQQAGRLEEIQPLVDDSGKLYPTDDGVRADS
SVDKLARLKPVFDKPFGNVTAGNSSQVSDGAALVLLASEAAVRRWDLQPIGRILDSQWAGLDPAQMGLGPVHAATPILQR
HGLGLNDLDLWEINEAFAAQVLACLAAWQDDIYCNEHFGTPAWGTLDPQRLNVDGGAIAIGHPVGASGARIVLHLLQALR
ARGKKRGMAAICIGGGQGGAMLVETLEDAR
>AHV92173.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MTALDIRPVSEADFDVWLPLWKGYQAFYNVTIDDAVTRLTWERFLDAGQPMHAALAYLQGRAVGMVHWIYHRSTWTAGDY
VYLQDLFVAQDVRGTGAGRALIEHVYRDAEAHNAARVYWLTHETNHTAIQLYDRIADRPGFIQYRKVMA
>AHV92174.1 hypothetical protein D560_0087 [Bordetella holmesii ATCC 51541]
MTQDTIDHYVRSALLLQGYRLSEAATQEVSLQFARIQAIAASFAAELLPLETEPATVYRA
>AHV92175.1 3-isopropylmalate dehydrogenase [Bordetella holmesii ATCC 51541]
MKIVVLPGDGIGPETMAVAVDVLEAASRRFGLGLQFEHDIAGHESLKKHGATVTPALLDKVKVADGLMLGPMATYDFKDE
ARGEINPSMYFRKSLDLHQTSRARTSPIRSR
>AHV92176.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MDIQLNDIALFVEVAKRKNFSHAAEGLGIPTSTLSRRVSELERNIGMKLLNRSTRRIDLTEAGAVYFERCRHIVEEARVA
HEQLQDMAAQPKGRLRISMPTSLAQLFLPIVIRDFREQYPDIECDFDLSMRPIDPISNPFDLVLRFGPQPDSSLIAKQIV
LMTQQLYASPQYLEQHGEPRVPADLGHHECLRPAMNEAFSYWVLHSGDKVERVQVTGRLAANNVGMLGRLASQGMGITPL
LVFDAMERAIAQSGLVRVLPQWSLTPMPLFALLPSRRIPAKTRAFLDFIQPRLTDA
>AHV92177.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MTASSALSGYMLASALGMAAGGFLVSAPPRTERTVTAALLMAGLTLVVLAMGWVPASMAALVVGLAGFCAGVAAPSRDML
IRRVTPKGATGSVYGLVYSGMDVGSALGPLGFGLLLDAGLAQGPWIGAGLAFAIGAILAQWIAIQARKAG
>AHV92178.1 glutathione S-transferase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MYTLLIGNKNYSSWSLRAWLALRAAGVPFREQKLGLFTEAFDQRLGGVTPAGLVPVLLDGDFAIWDSLAICEYAAERHPE
LHLWPAPVRARARARALAAQMHSGFGELRRLLPMNIEARLPGIDIGPAQQDISRVQAIWQDTLAEYGHGGPFLFGRFSIA
DAFYAPVVSRFTTYGVPAAGPVRAYMDAVQALPAMREWTRDALAEATFVPEDEPYRQQR
>AHV92179.1 xylose isomerase-like TIM barrel family protein [Bordetella holmesii ATCC 51541]
MPRFAANLSTLYQDIEMLDRCSAAARDGFRGVEMQSPYGYPTALWRDRLQSHDLELILINAPAGDAARGERGLACLPGRQ
EDFRAAVEQALEYAVSLMCPRVHVMAGCPATGSDPAALRATYIDNLAYAARLAAAVDVDILIEPINPRDIPGYYLNHQAE
AHAVALATGAANVKVQMDLYHCQILEGDVSMRLRHYIPQGRVGHVQIAGVPLRQEPDQGELNYPYLFQLLDELAYPGWVG
CEYRPAGDTRAGLGWLHAARRASTH
>AHV92180.1 putative HD phosphohydrolase [Bordetella holmesii ATCC 51541]
MTACLLHDLGHLIADHPGTPTLRGVDDKHQYFVLPFLRGLFDTRVLDPICLHVEAKRYLCYVEADYACTLSEDSRRSLNL
QGGSFDAAQAMDFASLPGAADAIRLRRWDDQAKSPTMITGSLAHFLQLAAGISERHKLLAA
>AHV92181.1 ATP-dependent Clp protease proteolytic subunit [Bordetella holmesii ATCC 51541]
MQRFTDFYAAMYGGASVTPTGLGYIPMVVEQSGRGERAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKD
ISFYINSPGGSVYAGMAIYDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFSLPNSRIMIHQPSGGAQGRPATFRSR
PRKFSTCASASTASWPKIPVSRSSASP
>AHV92182.1 drug resistance transporter, Bcr/CflA subfamily protein [Bordetella holmesii ATCC 51541]
MGALTAIGPFSIDMYLPAFPTIAQNLGVARGDVERTLAAYLVGLAMAQVVYGPLADRYGRKLPVMAGLVLYIVASLGCAL
AGNIESLTWWRVIQALGGAAGVVIPRAVIRDHYETQDAARAMSLLMLIMGLAPILAPLAGGQLLSIVGWRSLFWLMALAA
AAMLTSVIFIMKESLAPERVVPLRWHTIFGNYGALLTHRSFLAHSLAGGLGQAGMFAYIVGSPRIFIEYYGVAPQYYGLL
FGANAAALIVGSQVSARLLRRLQPATLQRRAQNALAIASLTAVVLTITGMMSLPLLMLCLIGYMFSQGFVNPNSAALALA
EQGRRLGAASAMLGTLQLSCGALAGLIISLWQTQSALPLTTVLAGCACLSWAAGRIARRGA
>AHV92183.1 RF-1 domain protein [Bordetella holmesii ATCC 51541]
MLHIQESLYLDERELDFGMIRAQGAGGQNVNKVASAVHLRFDVPASALPDEVKEAILALADRRISKDGVLIIKAQAYRSQ
DKNRADAVERLLALLRQALVKHPTRRATRPTMASKRRRVQRKVQRGDVKRLRGRVGED
>AHV92184.1 signal peptidase II [Bordetella holmesii ATCC 51541]
MTQASPKVRGKLGGALALALLIIVIDQVTKVYFNTAFSFGERVNVLPFFDFTLLYNRGAAFSFLAAQQGWQRWFFTLLGL
VAAGVIVWLLCRSPGQPRFRAALILIMGGALGNVIDRLIYGHVVDFLLFYWKDWYYPAFNIADVAITCGAVLLVLDELLR
GRAKPKTSAGA
>AHV92185.1 mlrC family protein [Bordetella holmesii ATCC 51541]
MDLGPCACLRIDDVRIVVASVKVQMADQEMFRFAGVEPQRASILVLKSTAHFRADFTAIADRILVCAAPGSMLMDAAKQP
>AHV92186.1 bacterial regulatory s, tetR family protein [Bordetella holmesii ATCC 51541]
MTDAALPRADRLSALRRQIILEAAERVFARDGLEHTTIRAIAKEAGCTTGAIYPCFDGKEAIYGELLRASLTRLLAHLDQ
QSRQAPAPLAARAAIEAFFSYYAARETEFSLGLYLYRGLQPRGLGREIDESLNAMLRQAVSRLGAGLAASKGWDAARVHI
EEMNVFTYLMGLLLLHHTRRIKSLQQRTETLLEHYCQALEHS
>AHV92187.1 quinone oxidoreductase [Bordetella holmesii ATCC 51541]
MANKLVKAVRIEQHGGPEVLKVVEVEVLPPAANEVTIRQHAAGLNFIDIYYRTGLYPHPLPHGLGFEAAGVIEAVGAEVK
HLKAGDRVAYGQSPLGAYAQARNVPAAQVVKLPKGVSFDDAAALMLKGLTVQYLFRQTYRLQGGETILFHAAAGGVGLIA
CQWAKALGVKLIGTVSSPEKAELARAHGAWETIDYSRENVAERLLELTGGKKVPVVYDGVGKDTWETSLDCLEPRGLMVS
FGNASGPVTGVNLGILNQKGCLYVTRPSLGLHINTPEKLKAAADELFGLVQKKKIKVRIDQRYSLEQAGDAQTALAGRKT
TGATILTLD
>AHV92188.1 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Bordetella holmesii ATCC 51541]
MATTQKNAPAQAPRRRISWNDPGFRAVIYQVVAVGLVALTVWFLVSNTLHNLAVRNISTGFGFLNREAGFAIGETLISYS
PSDTYGRAILVGLLNTLRVAVLGIVLATILGTLIGIGRLSKNWLVARLTSVYVEVMRNVPLLLQLFFWYALITENMPGPR
QAHNPLPGVFVSNRGVKVPEAVGASLDWILLGLGLAIIATLVLGHWAKKRQHETGRVFPLGRVAVALLIACPLVGWIVSG
MQLSLSLPELKGFNFQGGLTLTPEFAALLAGLVIYTSAFIAEVVRSGIQAVSSGQWEAASSLGLRRSQVLRLVVLPQALR
VIIPPMTSQYLNLTKNSSLAVAIGYPDIVSVVNTTLNQTGQAIEGILIIMAAYLTVSLSISIFMNWYNKRIALVER
>AHV92189.1 phosphonoacetaldehyde hydrolase [Bordetella holmesii ATCC 51541]
MNVLPTRLEAVIFDWAGTLVDFGSFAPTRVFVDAFAQFGVTLSLPQARGPMGMGKWDHIRTLCNEPDIARQYQERFGVLP
DDAAVTSIYERFLPMQLEKVAEYSDVIPGAVEVLADLAERGLKVGSCSGYPAAVMQRVLGRARHGAEKCHCPGH
>AHV92190.1 multidrug resistance protein MdtC [Bordetella holmesii ATCC 51541]
MILSAPFIVRPVATTLLALAVVLAGTLAFRLLPVAPLPQVDIPTISVSASLPGASPETMASSVATPLERSLGSIAGVTEM
TSRSTQGSTRITLQFDLDRNIDGAARDVQAAINAARSLLPTSLRSNPTYHKTNPSAAPIMTLAMTSKTLSQGQLYDLAST
IVAQKLAQVNGVGEVTVGGSSLPAVRVSLNPGALANRGVSLDQVRQTLSNANALRPKGVLENDEYHWQILASDQLNRAEQ
YRPLIVAWVNGAAVRLSDVATVEDSVEDLFQTGFYNDGQAILLILRWQADANIIETVDAVRAQLPQLAALLPGDVDLLVA
QDRTPSIRASLHEAEATLVIAVGLVVLVVLLFLRRWRAAIIPSVAVPVSLVGTFCIMYLCGYTLNTISLMALIVATGFVV
DDAIVVLENIMRHVELGASPMRAALRGSREVGFTVLSMSLSLVAVFIPILLMGGVVGRLFREFAVTLSAAILVSLVVSLT
LTPMMCARLLRAESPEAKKPVGRAGAAIGRFFDGLHDGYARSLQWALNHGRLMIAILLGTIALNVYLYTVIPKGFLPQQD
TGQLLGFFRVDQGTSFQATVPKLEYFRKIITADPAVQSLTAYAGGRGGSNTSFMQIQLKPQSERGVSSEEVINRLRGRLQ
REPGAQVFLVSQQDIRIGGRQSTGSYDYTLMSGDLALLRTWMPKVQRAMAELPELTDVDADVEDKGRQINLVIDRESATR
LGINMATIAAVLNNSYSQRQVSVMYGPLNQYHVVMGVDQKFAEDAESLKQLTVVAADGSRVPLAAFARLEVGNAPLSVSH
QGLFVADTISFGTAPGVSLEQATRAIDAAVARIGLPSDQIQAGFQGTAAELQKTLARQPWLILAALVAMYIVLGVLYESY
IHPITILSTLPSAGIGALLALMALNTEFTLIALIGVFLLIGIVKKNAIMMVDFALAAQRQQAMTPRDAIYQACLTRFRPI
MMTTLAAIFGALPLVLATGAGVEMRRPLGITIVGGLVLSQVLTLYTTPVVYLYLDRFRIWANRQRAARPEPEHS
>AHV92191.1 cytochrome o ubiquinol oxidase, subunit III [Bordetella holmesii ATCC 51541]
MTHAVANPSHDAHHGHEHHDDGSKTVFGFWVYLMSDLLIFSVLFATFAVLSNATAGGPHGSELFDLNFVLVETMLLLISS
FTFGVAMLNLHAGKANKVIAWLVITFLLGAGFIAMELYEFQHLIHEGAGPDRSAYMSAFFFLVGTHGLHVTAGLLWIIIM
IDMVRRHGLDSVNKRRLSCLSLFWHFLDIVWICVFTFVYLMGAI
>AHV92192.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MTAIRRPLDGLATGAMVVLCLCWAAKQIAIKAVAADVAPLLQIGLRSAFAAAVLGLVVLRTQGTGFWRDGSLRPGLGVGV
LFALEFVFVALGLHYTTASHMAVFLYTSPIFAALGLHAWVPGERLRPLQWLGVTLAFAGIALTFLGKHSPTDTAPDMLLG
DLLGILAGAAWGMTTVGIRASRLSEAPASKTLFYQMVCAALILPLLHGVMGGAAATWTVTALYSLLFQSVVVALMSYLAW
FWLLRRYLATRFSMWSFLTPLFGVGLGVILLDDPLDGHFAAGAALVLAGITLVSAAGTLQTWWARRRCR
>AHV92193.1 transcription-repair coupling factor domain protein [Bordetella holmesii ATCC 51541]
MDTQLPSTSPTLAALKPGTRFVQPCPPGSGDGWLLADLARQARKPIVVLAADPLQAQRLADEVPLFAPELRVRQLPDWET
LPYDAFSPHQDLISERLHTLHALMTESVDILTVPVTTALYRLPPPLSWRPIPFRFANATNWTKRRCARN
>AHV92194.1 putative permease domain protein [Bordetella holmesii ATCC 51541]
MDGKYFCWRLRRAGRFGWPGGGLDITAGQFSALAAMVLLAHNLPVKQAIVRRAGASFWATAGLRLVMALAYGAAVSWTCH
ALGVLSQPMSFAWMQGQQASAAELSLWQWLQGTAVSMALTFAVIAALLVLLDIMQRCGLTAALTRVLTPVLRWSGLDPQV
APVTMLGVTCSP
>AHV92195.1 DNA ligase, NAD-dependent [Bordetella holmesii ATCC 51541]
MVANAAERAARLRAEIAQHNVRYYVYDEPAISDAEYDALMRELTALETAHPELITPDSPTQRVGAAPLAEFGSVQHAMPM
LSLGNGFEDEDVHAFDKRVCDTLRGAGLLGQAEPAGYFCELKLDGLAISLRYENGELVQAATRGDGQTGEDVTANIRTIN
AIPLKLKGQVPAVLEVRGEVLMNRAEFEKLNQKQAARGEKVFVNPRNAAAGSLRQLDPRVTAQRPLRFFAYSWGEVQGLP
TGVSDAFDETAPGTGVASTLPRDTHGGMLEWLADLGLPVNVRFNHKAQGADGLLAFYRRIGSERAGLPYDIDGVVYKVDA
LPAQRVLGFVARAPRWALAHKFPAEEASTDLLGIEVQVGRTGAITPVARLKPVFVGGVTVTNATLHNEDEIRRKDVRVGD
VVVVRRAGDVIPEVVGPVLEKRSAELPLFVMPTHCPICGSAVERLEDETIARCTGGLFCPAQRKQTLVHAAGRKALDIEG
LGDKLVEQLVDNGRLKTLADVFTLDAFELAALDRMGKKSAENLVAAIDQARRPSLGRLLFALGIRHVGETTARDVARHFG
NISRIMDADEEALLAVPDVGPVVAGSIHRFFREPHNREVVHQLEQRGVQPQAEAQAQGGSLTGKTFVLTGTMPTWSRDEA
ARHILAAGGKVSGSVSKKTAYVVAGEDAGSKLVKAQELGLTILGEDGLKALLGQ
>AHV92196.1 phosphatidylethanolamine-binding family protein [Bordetella holmesii ATCC 51541]
MKLASLSFTDNESIPERYAFGRIDPQSRIALADNFNPQFSWDDVPEGTKSFALLCHDPDVPSKPDDVNQDGREVPAALPR
VDFFHWVLIDLAPNLREIQEGAFSDGITPGARAGHWRPTKRARA
>AHV92197.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MVGVAGGIAVIVGIPLGVTLIVTGRGALLQNQPVNHVLGIIINATRSVPFVILMVAIIPFTRWVAQTSIGTTAAIVPLSV
AAIPFMARIAENAMREVDPGLITAARAMGASPMQIICKVLLPEALPGLIAATIVTIVSLIGYSAMAGAIGGGGLGDLGIR
YGYQRFLPEVMLAVVLVLIVLVQAVQSFGDWLVRRLSHR
>AHV92198.1 molybdopterin-guanine dinucleotide biosynthesis protein A [Bordetella holmesii ATCC 51541]
MADNSIAGLILAGGQGRRVNEADKGLLLWRGKPLVAHVAQRLAPQVSQLIVSANRHIATYAAFGQVVSDDKQFGAWQGPL
AGLAAGLAVCRHPWLVCVPCDTPLIPHDLAARLTGAAIAAQAPLAVASCQGRRHAVCMALRPALLPDLRAYLAGGDRKVA
WWQDRAGAVEVAFDDAPAAFLNLNTAEDFAFAQG
>AHV92199.1 GTP-binding protein LepA [Bordetella holmesii ATCC 51541]
MQHIRNFSIIAHIDHGKSTLADRLIHRCGGLADREMSAQVLDSMDIERERGITIKAQTAALQYKAQDGKIYNLNLIDTPG
HVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAIDLGVEVLAVLNKMDLPQADPDGARQEVEDVIGIDATDAVL
ASAKTGMGIDEILEMVVARVPPPKGDPAAPLQALIIDSWFDNYVGVVMLVRIVNGVLRPKDKILLMASGATHLCEQTGVF
TPKSQQRPHLSAGEVGFVIAGIKELANAKVGDTITLAGKPATEPLPGFKEVQPQVFAGLYPVESSEYDQLRDSLEKLKLN
DAALMFEPEVLQALGFGFRCGFLGLLHMEIVQERLEREFDMDIITTAPSVVYEVQERDGTVLTIESPSRMPDVGKIADIR
EPIVKVTLFMPQEYVGPVMTLCNNKRGTQINMTYHGRQVHLTYEIPLAEIVLDFFDRLKSVSRGYASMDYEFLEYRSADV
VKVDLLINSDRVDALAMIVHRSNARYRAREVVSRMRELIPRQMYDVAIQAAIGAEVIARENVKALRKNVLAKCYGGDISR
KKKLLEKQKAGKKRMKQVGTVEIPQEAFLAILQVEDK
>AHV92200.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92201.1 'Cold-shock' DNA-binding domain protein [Bordetella holmesii ATCC 51541]
MAQKGKVKWFNADKGYGFITPDAGGTEVFAHFSAIQGRGYRSLNEGQEVEFDVKDGPKGPQAA
>AHV92202.1 ATP synthase F1, alpha subunit [Bordetella holmesii ATCC 51541]
MQLNPSEISELLKSRIEGLGASTDVRTQGTVVSVTDGITRIHGLSDVMQGEMLEFPNNVFGLALNLERDSVGAVILGDYT
GVSEGDQVKTTGRILEVPVGPALKGRVVNTLGLPIDGKGPINTTETDIIEKVAPGVIARRSVSQPLQTGIKAIDSMVPIG
RGQRELIIGDRQTGKTAVAVDTIISQKGKGVTCVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAASASDSAAMQYLAAY
AGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGAVKGK
TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQY
RELAAFAQFASDLDDATRRQLERGKRVVELLKQPQYQPLQVWELAVSLFTVNNGYLDDVDVAQVLSFEKSFKDLLKAKHA
AMIQRIEDTKELSKDDEAELAAAVQDFKKHGAF
>AHV92203.1 ring hydroxylating alpha subunit family protein [Bordetella holmesii ATCC 51541]
METAVEDDEIAERMDAGRRALMLRGVSEAGPYQSPMEDGMQHFHEWYRRIMDEKGD
>AHV92204.1 translation elongation factor Ts [Bordetella holmesii ATCC 51541]
MAEITAALVKELREKTDAPMMECKKALTEADGDLARAEEILRVKLGNKASKAASRVTAEGLIGLFISADGKQGAVIEVNC
ETDFVAKNPDFVAFVNKLAELVATQNPADVAALSALPFGEGTIETTRTALVGKIGENISIRRFQRIDTPDALASYVHGGR
IGVLVEYAGAEEVGKDLAMHIAATKPKALNADGVSADDIATERSVAEQKAAESGKPAEIVAKMVEGSVQKFLKEVTLMSQ
PFVKNDKQTVEQMLKEKGASIKQFVLYVVGEGIEKKTTDFAAEVAAAAAGRA
>AHV92205.1 cytochrome o ubiquinol oxidase subunit IV [Bordetella holmesii ATCC 51541]
MSAHHDVAHADHADHGSLKSYIIGFILSIVLTLLAFWLVMNGGFSRQLILIGVLVLCVAQLLVQLVFFMHMGASKSQRDN
LAAFIFTVMVIAIIVGGSIWVLHNMNANMLHPMP
>AHV92206.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MLDTPASVDVIDGATLRANALQVNLSENLSAVPGLQIPNRQNFAQDLQLSIRGFGARSTFGVRGVRIYVDGIPATMPDGQ
GQTSNIDISSADRVEVLRGPYSALYGNSSGGVVQVFTEDGARPPHVQTSMAAGSFNTLRYGVQASGASGTGASDLDYVVG
INRFTSDGYRDHSGARKNLANAKLGLQLDDDSRLTLVLNRVDLKAQDPMGLTRQEFDDDPRAASPAAQRFNTRKTVLQTQ
GGLVYERQVDADNALRVMVYYGQRETWQYQSIPVAVQSPPAQSGGVIGLRRDYGGADVRWTSHMTLAGQPFTVVGGLAYD
SLHEIRKGYENFTRGGATLGTKGALRRDETNEVYNLDPYLQTSWEFLPRWTLDTGLRYSSVDFDSRDHYIVAGNGDDSGD
ARYRRALPVATLRYALDDDSNVYVSFGKGFETPTMNEISYRPDGQPGLNFGLQPSVSTNLEAGIKRRFPTGLATAAVFHT
RTENEIVSAGSIDGRSAFRNGGRTRRDGLELAWDGEFGSHWRTRLAYTYINARYRDDVAGTGIAAGNTIPGIARQALYAA
LAWAPPQGWQAGIEGRYLDKLYVDDANSDAAAGYVVAALSAGYIWKHGPWTWSTYARVDNLFDRRYAGSVIVNEGNGRYF
EPAPGRNWSAGLTATYRF
>AHV92207.1 hypothetical protein D560_1618 [Bordetella holmesii ATCC 51541]
MQSLPDGQKTAFWDNEAMDTVIPLNDLEQAINYWRNLRPAQGEEARLCAEAAALATPYAMMIMARRQTLGLDELGPAARQ
AYDAWRAAMQTP
>AHV92208.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MSGDIEALIVACIPSLRRYARGLTGDRDRADDLVQDTLERAWRRYSRWQRRGELRAWMFGIMHNHFIDGLRAQKRQPELA
GETALQDLPARPTQDDGLAVRDLDRSLARLSADQRAIILLISVEEFSYEEAARVLDVPIGTVMSRLSRARERLAALLAEA
PPTRVAATLHRIKP
>AHV92209.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MGLRSHLPELPTPSRCHEILATPLQLASTPPRHRARCTHLQTQPGRIQPIDSSHLAYGRRFRCLTIVDDYTRECLAIEVD
TSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWF
LSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92210.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MLESLWLPLLPPVAIGLLLGWLMESLLLPRPAAPWRRPAAANLIHVAVWLVAFGLELALFRRPYFAVVNVLAIQLVIVLV
SRAKYQALQEPFVYPDFEYFTDAIKHPRLYVPFFGVWNALAAAAGYGVALWAGLALEPSILSGADGSPAAPGVAPLPLTL
LVIGLCVVGVLSAKWAGRRVVVDFDADNDLRRLGLIAALWAYAKAEREPIAFLQEQAPFAAKAVGVPLTELPDLVCIQSE
SFFDVRRAFPIVKKDVLSNFDQLCAESVAYGQLEVAARLTCPQI
>AHV92211.1 putative exported protein [Bordetella holmesii ATCC 51541]
MRILFLVLLLANVWAYGLGQGWLGPRPDDEGRDPRRLTQQLNAGQVSLAPKRQD
>AHV92212.1 peptidase M48 family protein [Bordetella holmesii ATCC 51541]
MFTLLFVALLIADTGVRLWLASRQIRHVAQHRDQVPGEFSARIGLTSHQRAADYTVARVRLGMFERVYDAMILVALTLCG
GLQWLDSTLGLFIQADFLRQIMLLVMVAALLGLAGLPFTLWRQFHLESRFGFNRMTPALFFSDLLKGVTLALCLGLPLAA
AILWLMSSAGALWWLWAWVLWTAFNLLLIFIAPTYIAPLFNTFTPLDDPDLTARIRGLAQRCGSTLNGLFVMDGSKRSAH
GNAYFTGFGKSRRIVFFDTLLARLNADEIEAVLAHELGHFKRHHIIKRIGLNLAMALVFFAALGWLAQQPWFYEGLGVLP
QLGGRNDAMALILFFLVIPVFTFMFTPLASWYSRRDEFEADRYAAAQSSSSNLICALVKLYDDNAATLTPDPVHSAFYDS
HPPAAVRIRHLLAGVTV
>AHV92213.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MDFEFSADQVAVRDAVAHVCERFSDDYWLERDQVGGFPHDFHAALASDGWLGIAMPSEFGGAGLGMTEAALMMQTIAACG
AGFAGASAVHMNIFGLNPVVVFGDAAQRQRWLPPLIAGQQKACFAVTEPDAGLDTTHLQTRAERQGDHYVVHGRKIWIST
AQVAHKMLLLARTTPLAEVSKPTQGLTLFYTDLDRERVEVREIDKMGRKAVDSNMLFIDGLRIPLEDRIGEEGRGFEYIL
HGLNPERILIAAEAVGIGRAALKRAVQYAGERVVFGRPIGQNQGIQHPLAQAWMQLEAADLMVFKAASLYDAGKPCAPYA
NSAKYLAAEAGHNACQTAVLTLGGMGYAKEYHVERLLRESYIPRIAPVSPQLIMCFIAEKVLGLPKSY
>AHV92214.1 calcineurin-like phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MGDIHGHFPRLKQVLDRFGFDPACDRLFSVGDMIDRGPHSEAAVDWLDEPWFFAVQGNHEDLAVRHVRNGLVDVDNWRRY
GGGWFLDLPAARQQALAARYEALPVVIELQTAAGAIGLLHADSPVRDWSRLAGAMRTHRRRSRGRAQWSRDRLAQADASG
VANVRAVVAGHTPLSQPVVLGNVYHIDTGGWQEDGYFTLLDLGSLSAWPKPARTTPL
>AHV92215.1 hypothetical protein D560_2514 [Bordetella holmesii ATCC 51541]
MRNAWALVRGTSLRSGVFAQKGSRFLHRYPFPAKNAAMTR
>AHV92216.1 arginine/agmatine antiporter [Bordetella holmesii ATCC 51541]
MLALIAIVVGSMLGGGVYSLPQNTAATSAVGPVVIAWIIAGIGVYFIANAFRMLSDLRPDLHAGVYMYAQEGFGSFIGFN
VAWGYWLMTCFGNVAFAVILMDAFDQIFPGVFTNGNNLNSIICGSILIWGYNYLVLSGTKVAGFVNTVGTIAKLVPLVAF
VLLLGLLIDYSQLLDNVWGNAPQIMSGTGAAATPVSFTAQIMAPMTVTLWAFIGVEGAVVLSGRARNRSDVGKATLLGFL
AALIIYILLSVLPFGAMTQPELAQVANPSTSGVLEHVVGAQWGSWLMDLGLIISVLAGWLAWTMLCAEIPMAAGQNGAFP
KAFARTNKNEAATVSLWISSGVMQAAMLLVYFSNNAWNTMYNISALMVVPAYITTTLYMTKLCLTHEYKKYSNKGMTLGL
TSGVMGVLFCLFILYASALNYLALVPVLLTCGLPVFIWSRKEKKDGKPMFVGLEKLYVAILLVADVIVFWLLYTGKITL
>AHV92217.1 bacterial sugar transferase family protein [Bordetella holmesii ATCC 51541]
MIKRAFDLLCSLIGLLLLSPLLLLVAMAIKLDSPGPVFFRQERIGREGRPFRIHKLRSMTDRQPAQVSQITIGADARITR
VGALIRRWKLDELVQLIDVMQGTMSLVGPRPEVARYVALYPDEVAAIVLSVRPGITDPASIHFRNENELLGGSADPEATY
RDVILPEKLKLQVAYVREQSFLGDLAIIVRTVISLGR
>AHV92218.1 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Bordetella holmesii ATCC 51541]
MKRLLSTALVLALTGCALMDPASKPVAELEPTQLGLADSSPLWPTTQWWQRYGDPQLDQLVDAALHSNPTLTAALARLAQ
ANASVAGARAPLMPRVDANYNLTREHLSGNYQYPAPLGGSVVSDNRMALDFSYELDFWGKNRSRLQAAVSRRDAAQADAQ
AARTMLARSVVRSYLNLQNAFAQRDVIKRVIAQRDDVWKLTQDRRQAGLDTAVEVKQAESAAAAARVDLTQVETTIAQLR
NQLAALTASSAAQMQSITAVVLQAPDGILPHALPLELLGRRPDVVAARWRAQAARHEIDSAKAEFYPNVNIAAFAGFQAL
GTNMLFDRFSRTTGVGPAITLPIFHGGELNANLASSRADADLAVSDYNQTVLTAVQQVGDALDALRLIDREKTERRQASQ
AIEDAYDLAVRRYRSGLGNYLSVLLAQDGVLAQARLLTDLQYRAYQLDADLAYALGGGYTPDASNQPSSSH
>AHV92219.1 anti-sigma factor protein, FecR family [Bordetella holmesii ATCC 51541]
MFEVLTPHGQVRSAGASCMVRLERQSSLAVALQSRIEVLPRAGEPVMLDAGEGTRFGQTWADRPQPMEYAAAWQEGWLKV
RDQPLGTVVAALERYRTGLLRVSPQAATLAVSGLYPLDDADRALSALEHTLPITVSRYTRWLTVIDVRAA
>AHV92220.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQAWNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDVWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLCSMSVPY
>AHV92221.1 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MSRRPVKTTEEFRMNGSEAMVHTLLNHGVSVCFANPGTSEMHFVSALDRLPQMRCILGLFEGVVTGAADGYYRMTRQPAA
TLLHLGSGLGNGLANLHNAKRARSGILNIIGEHAQDHIANDAPLTSDIQAIARPVSHWVRTCASAATAAADTAAAVHAAS
GAPGKVASLILPANAAWEPSAGGAVRPQRARPAPSPAASVVDAIAQALRTPDVRPEEIALLLGGRAMLGEGPRLASQIAA
RVGCQLLAETKNARSQRGAGHVNIPQIPYPLNGALQALSGVRLLILVDAVAPVAFFGYPDKPRFLTHPDCRIETLATAEE
DAMTALAALNDAVGGRADQMVLVGSGARDQPWDEQARPNSQDMGRVMAALLPDHAIVVDEAITTGRQLQTGAAAGLAHDW
LEITGGAIGYGLPCAVGAAVACPDRKVVAVIGDGSAMYTLQSLWTMAREGLDITVIICANRKYQILQGELSAMGGPPPAA
NATRMLTLDAPCLDWVKLAEGQGLSATRVATMAGFATSLAAGLASGAPNLIEVLI
>AHV92222.1 pyruvate ferredoxin/flavodoxin oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MAQRTGATNYYLEILPVSRAELCGREPVFSLVPYPGDVSIVAASELVEAGRMLQGGYVHPQKTVLVASTHREYAVSEKSA
MGDGRYDGERVMSAAATLAHEAILFDMAVLAARHRTVINTVLFGAMAGSGALPFDRQACEAAIRQSGKAVQASLAGFAAG
YDRARGVAASEAPPMPGTATAFPARVAALPPALREVASHGVELVADYQDQRYAGLYLDRVERMLRAEQAHGGGALDVSRE
TARYLALWMSYEDVIRVADLKTRRERLARVRREVGAGQQEPLHVTEFLKPGLDEVCSVLPPGLAGWLRRRLTRRLGKQGM
GLHVRTSTVGGFALLCLLRGLRRWRPRTERYHQEQALIERWLQHVQALLPISPPAALELALCGNLVKGYGETSERGHRNL
GAILDDTQRCGSVPDLTERIAAARRAALADPQGKALARALDLPDPPMIEQPLRFVRKAASS
>AHV92223.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MMAAKSDLDRQIADLLADPAYEGHPLRVALEALWKQANEHMVRIERVTQISDAYQSMALQREQGLYERFDRQLQRLARIA
RISDHYQSMMRDLNHTLEETSRRDPLTGLFNRRALMDIIRTAVERSDASGRTFVIAMLDVDHFKSVNDRFGHETGDRVLV
ELAGVLQQSMRDSDHCGRWGGEEFLLLLPDTDLAAAQLAMDRVVGAVRALSIGVSGDVLRLTVSIGMADHQMGESLSETL
SRADQALYLAKHDGRDRVALTGAAR
>AHV92224.1 D-threonine aldolase [Bordetella holmesii ATCC 51541]
MPEPALPGQLLAQVDTPSLVLDLDVFETNLSVMQQWADRHGVALRPHAKAHKCPEVARRQMALGARGICCQKVSEALPFL
QAGIRDIHISNEVVGAAKLALLAQIAVQADVSVCVDYMHNLQALAAAMAQAGARITVLVEVDVGQGRCGVVDDHDVLALA
RAAEAMQGLRFGGLQAYHGSVQHVRGHAERAARCAQAAARAAGYASLLRAHVITCERITGGGTGSVEFDAASGVYTELQA
GSYAFMDGDYGANEWVGPLTFGTSLHLLSSVMSTPAAGRIILDAGLKSATIESGLPRIEGRPGLLYAAANDEHGIVRVDE
GTAAPALGETLLLVLPHVDPAFNLHDNVVVLREGVVVDVWPIAARGLSR
>AHV92225.1 glnD PII-uridylyltransferase family protein [Bordetella holmesii ATCC 51541]
MSSSTSSFDQALAWSGHLRRRLDAHPDLLDWLDEAAPMPVDAARLQAWMCELAGAEDMLRIDTTRTVLRKLRERVFLALI
TRDLGGQADLEEVVGAMTELADLAVSAAYRCVAADLAQAHGVPRDIHGAPQEMLIVGMGKLGGRELNVSSDIDLVMLYGD
EGDTDGPRRISNHEFYGRLTRRMMPALSEVDANGQVFRTDLRLRPDGDAGPLAWSLDAFEHYLIGQGREWERYAWLKARL
MPAEAFAGSDSRLQAQQLESLRVPFVYRKYFDFDALAALRALRERIRQDWQRRALARSGVDSANNIKLGDGGIREIEFVV
QLSQLIRGGRMPALQKRGLIEALHAERDAGLLSEQDATRLEAAYRFLRRTEHALQYREDEQTHLLPGTGAQRDTLARALG
YTPTEFEDTLAGHREFVSQTFRNAFRLAGLGEEDEPPRRGPANAEERLGQQIQEVFGEQADDLLHRTESLLSSHRIRSLP
ESSRRRLEALLPAALQAAAQTSAPLDAAKRLLDLIEAIAQRSAYLALLAEYPDTLARVARMVAASPWAAQYLTQHPLLLD
SLIDWRTLFEPLDFSQIARQLGADLDACLLPDGSPDVERQMNLMRDVQRQASFQLLAQDLEGRLSVEALGDQLSALADLL
LAETIRRVWPLVNRLPGAQPQFAVIAYGKLGGKELGYASDLDLVYLFQDEREDAAEIYAKLGRRMTSWLSTMTSSGRLYE
VDLRLRPDGDAGLLAVSLEAFEQYQRKHAWPWEHQAITRARYAAGDTEVGAAFERIRGEILVMPRDTAVLRSEVLAMRDK
INAGHPNHSELFDLKHDRGGMVDVEFVTQYLVLCHAGEHRVLVNNLGNIALLRLAGQAGLIPSNLGLAAGNAYRTLRRVQ
HQMRLKGIDRARVPPAELADERDAVRGLWRTVFGDASMPGAAS
>AHV92226.1 bacterial regulatory s, luxR family protein [Bordetella holmesii ATCC 51541]
MSPTRILLIDDHALVRDGLKLHLESHPAFLVVGEADHAQAALDLLARCRSEDLPDLVLLDLYMHDNVEYMLQAVRAGARG
YLLKDEPAEEIITAIEAVMAGRNYFSARVSMKLAQSCAPASLLTQREREILRHIGAGQANKQIAQALNLSVRTVETHRQN
LKRKLGIEGQAELIRYAIEHRVI
>AHV92227.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIP
LRGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV92228.1 aminotransferase class IV family protein [Bordetella holmesii ATCC 51541]
MDALFWYNGQWLTDNPKLLGPADHAFWMASMVFDGARAFRGLTPDLDLHCQRVVRSAERMLMKPKLSAAEIETLCREAIA
RFPAGAELYIKPMFYCADGFLLPDAEKTQFVLHVFKVPMPGTQGFSAGFSPFVRSWPNMAPTDAKASCLYPNGQRAIAEA
ASRGFDNAIMCDGDGNVAEFASSNIWIAKDGIVATPVPNGTFLNGITRQRVLALLRTDGVQVQERSLTRADIEQADEVFS
TGNYGKVVHVNRVEDRELPYGPLAQRAHRLYMNYAESQT
>AHV92229.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92230.1 S-formylglutathione hydrolase [Bordetella holmesii ATCC 51541]
MELLSEHRAFGGRQRFYRHDSTAIGLPMRFSVFLPRQAENGRVPVLFYLAGLTCTEETFMIKAGAQRLAAEHGLMLVSCD
TSPRGAAAPGEAEHWDFGVGAGFYLDASSEPYAAHYRMESYVAQELFDLATRELPGDAARAGIFGHSMGGHGALTLALRH
PGRWASVSAFAPIAAPMRCPWGQKAFSGYLGQDRAGWAQHDASELMLGLKNPYPQGILIDQGLSDQFLAEQLYPEVFEAA
CQHAGQALTLRRHEGYDHGYYFISTFMADHIRFHVERLR
>AHV92231.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MQPLRIVHSEAATSFGGQEGRIFKEMHAMRARGHHMEAIVQPDAQLGERLRDAGFTVHTLYMDGPLNYVKGVLAIRALLK
RGRYDVLNTHSRRDTVIAAAAARLAGTPLIVRTRHLSNKVGSLWSYTGLPHRVTTVSDHVRDGLIARGVPPAHIATLYSP
IVLPPPVERSTLRGELGLGDDDLIVGCVAVMRASKGHKALIDAMVPLLVNHPRLHLVFVGGGSPVFEQTQAYIAELSLSS
RVHLMGMRRDVPNLLAGFDIFALATEQEASGTVYVEAEASGLPVVGTNVGGVSEMMRDGQTGILVAPKDGQALTEALRRL
IDDAALRQRMGQAGWRMVREEGVFSPERLAENTEAVYRKWLTERKR
>AHV92232.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MSRFPARLTGVWQRRRPLRATILGFPLSSSFMSSASARYMVLPLLAALIWSVNMVVTKMAVSVISPAAISFYRWLIALVL
LAPFALPGVVRQWAQIRAVLWRLAVLGALGMAVFQGLSYVAAASTTATNMGIITSTVPLMTIVVGALLLREAPSLMAVVG
ALVALFGLGILMGEGHPTRLLAIGGSLGDGLMALAALSYALYGVLLRRWHLQIGVWQSLFMQAAFVVVFQLPFFLLASPS
PLNGQNLPLVLYAAIFPSLFAPFLWMQGVRYLGPNRASIFLNLMPVATVAIAALVLGERPHSYHIVGGLLALIGVSLAQV
RLRRRPATAVSS
>AHV92233.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPYLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92234.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MQQHKLDASDYASPPNLETLYGDHHPWLQDWLRRRLGNAADAADLAQDAFMRLLAKPLPFGSRPQARVYLRTLAGGLCVD
LWRRRQIEHAWLQTLAAQPEAHVPSAEHQAIVLQTLQEVDRLVRGLPPKAAHAFIMAVGCEMSDQEIANELGVSTRMVRK
YVAQAMLQCLQKL
>AHV92235.1 methionine--tRNA ligase [Bordetella holmesii ATCC 51541]
MSRTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGNTVHFVGADDAHGAPIMLKAEKEGISPQQLVARYAAERPR
YLDGFHVRFDHWHTTDSAENVALSHEIYGALKAAGLIETRSIEQFFDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCG
AVYAPTELIQPYSALTGATPVLKTSDHFFFKLSDPRCVEFLQQWTTGSNRNGTKHLQSEVQAKTREWLGTDDGQAKLGDW
DISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCTKTGLDFDALLDPAGPTEQVHFIGKDIIYFHALFWPAMLKF
AGRKTPDALNVHGFITVSGEKMSKSRGTGISPLRYLEVGMDAEWLRYYMAAKLNARVEDMDFNPEDFIARVNSDLVGKYV
NIASRAANFITRHFDGKLAYVGDTAALSAEFAQQAESIRAALEGREYNRAIREIMAYADGINQAFDAAQPWVLAKNYADA
DASRRAQLQDVCSRALAGFKALSVMLAPVLPALAARVARELFGAPRDFVWTDAAELPSQVAPFKHLMQRVDPKMLDALFE
APAAPPEPAATPGGEALAETISIDDFAKVDLRIAKIINCEEVEGSTKLLRLTLDAGEGRHRNVFSGIKSAYTPADLIGKL
TVLVANLAPRKMKFGVSEGMVLAASHADEKVDAGIYVLEPWPGAQPGMRIH
>AHV92236.1 acetylornithine deacetylase [Bordetella holmesii ATCC 51541]
MNARTWLQTLVGFDTTSRNSNLALIETVRDWLKQQGVQAWLVHNPERTKANLFATLPASDGGVQGGIVLSGHTDVVPVDG
QDWSTDPFTLVEADGRLYGRGSCDMKGFIAASLALVPEYLAMQRSKPIHLAFSYDEEVGCAGAPYMIADLHDRGIRPEGC
VVGEPTGMQVVVAHKGINLFRCRVHGRAAHSSLTPRGCNAIEYAARLICHIRDVADSFKANGPYDQFYDVPFSTMTTNQI
QGGIAVNTIPESCEFSYEFRNLPGMPAEAIQAQVETYVAETLLPRMRAEFGDAAIEIERGAAAPGLEASEQAAITQLVRS
LTDDRSTRKVAYGTEAGLFQGIGIPTVVCGPGHIEQAHKPDEYVALDQLAGCETFLRKLGQAL
>AHV92237.1 motA/TolQ/ExbB proton channel family protein [Bordetella holmesii ATCC 51541]
MLSLLRDAGWPIWPLLATSIFGLALILERLLSLRRAHVMPRGLTEQVNDMLRNHDESPEAFARLERNSPFGRILAEVLRT
RHDSREAQRDAVEVVGQGVAQELYRYIPAIGTIAMVAPLMGLFGTVVGMIEIFGAYNPGSADPAQLAHGISVALYNTGFG
ILIAIPTMIAHRYFRSRVDNYMNAMEQAAARLARGVRS
>AHV92238.1 pyridine nucleotide-disulfide oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MDYPREFDVIVVGGGHAGTEAALAAARTGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAIATDEAGIQ
FRILNGSKGPAVCATRAQADRVLYRKAIRHRLENQPNLSLFQQAVEDLIVEGDKVVGAITQIGLKFRARSVVLTAGTFLN
GLIHVGLEHYSGAGQGILPPSRWVNVSRN
>AHV92239.1 permease family protein [Bordetella holmesii ATCC 51541]
MLEKLFKLREHGTSAKTEVIAGLTTFLTMSYIIFVNPDILSSTGMDRSAVFVATCLAAALGSLIMALVANWPIGMAPGMG
LNAFFAFTVVKTMGYTWEQALGAVFISGVIFLILTISGIRAWLIRGIPHSLRSAIAAGIGLFLAIIALSSAGIVVPHPAT
KVTLGDLRGHAPLFAILGFFIIAVLDALRVRGAILIGILVVTVLSMALGYNEFKGVFSAPPSLAPTFMKLDVMGALHSGL
VHVILVFVLVEVFDATGTLMGVAKRAGLVPEDRPNRLGRALFADSTAIVAGSVLGTSSTTAFVESASGVQAGGRTGMTAL
VVALLFLAALFISPLAGSVPAYATAPALLYVAGLMMRELVDIDWNDVSEATPAALTALIMPFTYSIANGLAFGFISYVVL
KAFTGRIRSVHPATWLVAALFVIRYAFFPE
>AHV92240.1 cyclase family protein [Bordetella holmesii ATCC 51541]
MQRWKNRPPGSNWGDYGPDDQLGRLNLITEEQVLKGAREIQAGKTFCLSLPLDLPGGNVLNPRRHPPQLSPTRLHDTPYV
NFPLRAINPDAVDVLSDDQVLLSMQYSTQWDSLAHVGALFDADGDGRDELVYYNGFRAGVDVIGPADGDHTGCGCNSGGP
SAALKIGVENLAEKGMQGRGVLVDLAREFGTGRTLVGAAELHQAMKAQNVAIEPGDMLVLRTGYAEAVVQMQGTPDANVL
HQFGAALDGTDEALLSWITESGVAAICADNYAVEAYPARDRQGRRAMLPLHHHCLFKLGLPLAELWYLKDLAQWLQDNGR
NRFMLTAPPLRLPHAIGSPVTPIATV
>AHV92241.1 putative lipo domain protein [Bordetella holmesii ATCC 51541]
MFQINLPLSPSVAKLSACVSLVLLAACSSAPPANISLPAGGSPQATSNASIGDVKTQRIEWKGVKPGCNGECPTIEIDSV
AFPDIPN
>AHV92242.1 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Bordetella holmesii ATCC 51541]
MLPGHFDQVPAQGAADVRLSAWWLGWNDPVMTGLIEQGLANSNDLKAAEASLREARALAVVVDSALYPNLGAHAGGQRGK
AELRQPHGLPRDTAMVTDYLAGVAAVWEVDIFGGRRSDAAAASEAAAAMQQRLYGVRMLVAADIAEAYLQERGLQARLRV
LQASIDASDKLLRYARGRFGAGQVTRYDVDRAQAQAENIRAQQPLLVSQFDVRLRRLAVLTGQPAQALRTLPEQPPTVAV
PDAPGGIVPSEVLARRPDVRAHAHEVSAYAARLGSARAEWFPRFSLSFLLRDGRLDVAGLPALQGSAGLFGVGVTLPIFT
AGRIAANVEAADARLQAALARYDQSILDALQDVDNAYGMRRGLDEREQLLLQAAGTARRNATQAGRLYDAGRQTLQEVLE
AQLDSLHRDDELAQVRTARAQVTVKLYQALGGGWNDTDTPRSGE
>AHV92243.1 rhodanese-like domain protein [Bordetella holmesii ATCC 51541]
MIPPLSASSTPASPLRIHACALKACLHDGAEIALLDIREHGQYGQAHLFYAVNAPYSLLEFDVRRLVPRRSTRLVLYDND
DGLAERAAAVLQALGYPQVAILDGGLPAWQSQGYAVFAGVNLPSKTFGELVEQTLHTPTMSADELHRRQTRGDNLVVLDG
RPYGEYGKMSIPGAICCPNGELALRIDALVPDADTTIVINCAGRTRSIIGAQTLINLGVRNPVYALENGTQGWFLHDYTL
EHGQTRRHGMECSAGQLGRARQRAGHWPSATACRSLPPRRWLPCRPTRRAQPMFSISARSRSTPRRRSPAPHTRQADNCC
RPPISSWVRAARAWCWSTARKSAHRSWPAG
>AHV92244.1 hypothetical protein D560_1731 [Bordetella holmesii ATCC 51541]
MVFEVSKGIMCNYCSLAPRLALLVCEDALARLYCIVESQTGKGL
>AHV92245.1 AAA domain family protein [Bordetella holmesii ATCC 51541]
MVLLDEVEKTHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQQIQSMTGKPYEVIKDVVMEELKQTLRPEF
LNRIDEVVVFHALDAQHIESIARIQIRRLAERLEKQEMQLEVTDTALSEIARVGFDPVFGARPLKRAIQQQIENPVAKLI
LQGVFGPRDVVPVDYRDGKFVFTRTLQ
>AHV92246.1 hypothetical protein D560_2915 [Bordetella holmesii ATCC 51541]
MTTHTRIAAFLSTSALCLGLAAAPAFAAPTDGAAAATAASGSAKSGHGKTAHQKHAKNKAHHKAKAEMPGTAPAK
>AHV92247.1 iron-sulfur cluster assembly accessory family protein [Bordetella holmesii ATCC 51541]
MNAVTETVDLQAPPPVPLVFTDSAAAKVKDLLAEEGNPELKLRVFVQGGGCSGFQYGFTFDEVVNEDDTVLDKEGVQLLV
DPMSFQYLVGAEIDYKEDLEGAQFVIRNPNATTTCGCGSSFSV
>AHV92248.1 GAF domain protein [Bordetella holmesii ATCC 51541]
MFQAAPLSTASKPQFYRELVAQAQALLAGECDRIANAANLAALAWQALPQINWCGFYFFDGQELVLGPFQGKPACVRIAL
SRGVCGAAASQRQTQVVPDVHAFPGHIACDAASRSEIVVPLVLDGQLLGVWDVDSPVPGRFDDDDRQGMQALCQVYLDSL
AR
>AHV92249.1 hypothetical protein D560_3773 [Bordetella holmesii ATCC 51541]
MADAGVVLVMMSLAAREVAARPAERFSGAGNLRIGALAVITTTAVTAMFILSTALHPDPWYDPRYLIALVGIVLGSVLNA
ASLALDGMLGNVRRQRAAIESRIALGATPRQAFSPLMRESVRRGLVPAINQMAAAGIITLPGIMTGQIIAGMDPVEAVKY
QILILFLLCGASALAAMGVAWAALRRLTDARGRLRLDRLHVR
>AHV92250.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92251.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGLPSRRKAVVYSAG
>AHV92252.1 biotin synthase [Bordetella holmesii ATCC 51541]
MQTINLAIRPAPGPWRVSDVLALYDQPFPDLLYRAQTVHRENFDPREIQLSSLLSIKTGGCPEDCGYCSQSARHDTGLEA
EKLMPLDGVLNAARAAKAAGAQRFCMGAAWRSPKDHQLEAVAEMVREVKALGLQTCVTLGMLRQGQAERLKHAGLDYYNH
NLDTSPEYYGSVITTRGYQDRLDTLEQVRDAGIHVCCGGIIGMGETRRDRASLIAQLASMDPYPESVPINHLVPIAGTPL
ADSEPLDVFEFIRTIAVARITMPRAKVRLSAGRQSMNEAEQALCFMAGANSMFYGDALLTTGNPQVQADRALMDKLDMRA
EA
>AHV92253.1 putative isrso14-transposase orfa protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAG
>AHV92254.1 holo-[acyl-carrier-protein] synthase [Bordetella holmesii ATCC 51541]
MDLIRVDRISRALERHGDRFAEKILGIEEMAKFRARRTRDPACGIRFLATRFAAKEAFSKAIGLGMRMPMTWNRVQTLNA
PGGRPVLVIDPALLPWFEQRFGAAHVSITDESDMAAAYVIVESRLGASNT
>AHV92255.1 lysR family Transcriptional regulator domain protein [Bordetella holmesii ATCC 51541]
MVALPDYQGERCPVYLLCVERSRLSPAVRRLRDFLSARFAQAA
>AHV92256.1 hypothetical protein D560_2381 [Bordetella holmesii ATCC 51541]
MLWVKTFHIVFVVSWFAGLFYLPRIFVNLAQHSDPATQSCLLGMARRLYRFMTIIAVPAILLGLWLYVGYRIGVGRATAG
CTRSCFWCCCSSATITPAE
>AHV92257.1 gram-negative porin family protein [Bordetella holmesii ATCC 51541]
MIRGRRRVLALFLSTAAWGGSTHAEDTVLQLYGLVDAGIASMHVSAGTTSGTRSGLLSGGQSDSLWGLRVSESLGDGWRA
NAGLESGFDLVNGSSNTSGQLFDYGSWVGLANDSLGELRLGRQATVGASFGSELEVAPWRDMGMGALFKASDNYQRDNLV
NVYTPQWGPWQAGLSYAFDAAGPDGPSPQGRGHAWSAGLKYDSEPWLAVLTWDRLHPGLGSAASGRQPMAWQAGMSYRAD
GWKMSIAWSRQRDGYVGQDAGGIEGLGPLGFVQGGRADAWLVGTEMPLGASSALLLQASWSRPNWHWDNGQRARAIQLYT
VGWRQDLSSRTSIYAFVGRMRHGSLDEGFTPEATHTTRVAVGLTQQF
>AHV92258.1 nitrogen regulatory P-II family protein [Bordetella holmesii ATCC 51541]
MKQVTAIIKPFKLDEVREALAEVGVSGLTVTEVKGFGRQKGHTELYRGAEYVVDFLPKIRVEVVLADDLVDQAIEAVLKA
ARTGKIGDGKIFVTPVEQAIRIRTGESDEEAL
>AHV92259.1 ribosome small subunit-dependent GTPase A [Bordetella holmesii ATCC 51541]
MSAHTEGRIIAAHGRHYSVELADGSLRKCFPRGKKTGPAVGDWVRITPQGADEGAIDAVLPRRNLLFRSDEMRSKQFAAN
VDQLLIVIAVEPTFSEDLLGRALTGAWSAGIEPLIILNKIDITAGLDHARFRLAPIRALGVPVIELSVQDAQTVHRDLAP
RLVGRVNLLLGQSGMGKSTLLNTLVPDAQAATREHSTALDMGRHTTTSTRLYHLPPPGGDLIDSPGFQAFGLQHLSGEDI
LRGFPEFKRYIEDCRFYNCTHRHEPGCGVVGALKDGHIDPGRYALYERILAETEAARRY
>AHV92260.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MFLLVQEGQMVMHSGGAFSSMTPGQLAWIPPGMQLQARWFGRARGTAMFVRAHACATLPSTSCSWRATPLVEALYLRLTQ
GTALANSRAHRLFDVMTAELALVDAEGLSLPLPHDERLLALAYALLAAPDDGRGIDAWARECNMSERTLMRRFRAETGVT
LGQWRVQARMLRALELLSQGEAVTQVALAVGYESTSAFIGIFREQFGVTPSRYGANA
>AHV92261.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MPPIRRPIGRALRLAGAGMLLAACANLNQVPPGTPLADVQAQFGAPNFACDLPNGGQRVIWTQQPYGQFAWGANVGPDGR
VDRVVEVLTDEHFKVLGTGTWTADQVRCEFGPPAEIKQVGLPSVRQVVWSYRYRESRVWNSLMYVYMGREGDRVTRFHPG
PDPMYDEDWRWH
>AHV92262.1 voltage gated chloride channel family protein [Bordetella holmesii ATCC 51541]
MLPCALAALRWLTLRVAPQAAGSGIPQVIAALSMPPGPAQHRLVSLRQTLWKIPLTFCAMLAGASVGREGPSVQVGAAVM
LAWGNLCRRLGLRMRGFHTQELIAAGAAGGLAAAFNAPLAGVIFAIEELGRGTGLRWQRLVLLGVLACGFMVVALAGNNP
YFGVFGAGSLSENMVWWVVACGLLNGCLGGIFARLLGKGLPGVLPVHWRESVRRRPVMAAFGLGLVVALIGVTSAGATYG
TGYETAAVLLGGEGQAPAGFGLSKLAATVASYWAGIPGGIFTPALTTGAGLGHQLWLWTGGSVDGRVLVLISMAAFLAAA
TQAPLTASVVVMEMTGSQPMLFWLLAGSLLASVVSRQFCPQPFYHFSAGRFRRAALQEVSRAAPSADSSRG
>AHV92263.1 META domain protein [Bordetella holmesii ATCC 51541]
MSMKHLLLAPVLAAVLAACAPASAPGEGSTSMTADTASLPLTAYTWRLNGATDAKGQPILRTGVERGLRLSFTQDALSIQ
GGCNTQFGGYRLAAGVLSVAHLAGTMKACEPALMRLDADVAGVLKGDMRLRRSGDAAAPELTLTAPDGSVLRFAGEPTAE
TRYGGPGETVFLEVAAATVACNHPMMPGQRCLQVRERRYSESGVALPAQEDWHPLYQTIEGYQHHDGVRTVLRVKRYERK
NPPADASATVYVLDMVVEQQLS
>AHV92264.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MQGRVAVVTGATGGIGQAICQQLHAMGAAVAQVDIHADPSAAAPAGGIHLRCDIADPASVAEMARQVREQLGRCDILVNN
AAVSAPPTALEDFPIERWDHILRVNLRGALLYAQSIFALMRQQPTGSIINVASISAQSPTRVGAYGTAKAALQALTRQMA
VEWGPLGIRANAISPGMIRTPLSEVHYRDEGVLQKRNASIPARRVGVPADIAGAVAFLASDASLYVNGEDIVVDGGFLKA
SLSNLYRD
>AHV92265.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Bordetella holmesii ATCC 51541]
MEWEIVIGLETHVQLSTESKIFSGSSTRFGAAPNTQANVVDLALPGSLPVMNRGAAERAILFGLAIGAHVAPRSVFARKN
YFYPDLPKGYQISQYELPVVQGGTLSFFVGEEEKTINLTRAHLEEDAGKSLHDDFHLANGNPASGIDLNRAGTPLLEIVT
EPEMRSAAEAVAYARALHSLVVWLGICDGNMQEGSFRCDANVSVRPRGQAEFGTRAEIKNVNSFRFLDRAIQYEARRQIE
LIEDGGTVVQETRLYDADRDETHSMRSKEDAHDYRYFPDPDLPTLVISPDWVDAVRANMPELPSAMRARFVADYGLSDYD
AAQLTVSRAMAAYFEEAARALPAGQAKLAANWVMGEVAATLNRDEKELAHAPVQAAQLAALINRIVDGTISNKIARDVFA
AMWAGEHGADPDAIIAARGLKQISDSGAIGTMIDEVLAANPAIVAEYRAGKEKAFNSLVGQIMKAARGKANPQQVNELLK
AKLSA
>AHV92266.1 demethylmenaquinone methyltransferase family protein [Bordetella holmesii ATCC 51541]
MTTLAREPFRDDEAFRALERITTATLTTVLLKKGLRNVWIRGAFPLAPGLPRIAGRAFTVRFIPAREDLATPASWSSPTS
TRAAIEQMPAGCIAVVDAQGVKDAGFWGDILCARMAHRGVAALVSDGAVRDLAGVLSTGLPVWAAGTAAPPSVAALTFVD
WQQPVGCGGVAVFPGDVIVADQDGAVVIPAALLDEVVAEAVEQERLEGWIMREVAQGRALPGLYPPNAEHKARYEASKRD
DAAT
>AHV92267.1 transcriptional regulator NrdR [Bordetella holmesii ATCC 51541]
MVDSRVSEEGDTIRRRRRCLSCDKRFTTYERIELAMPTVVKRDGSRSDYDAAKLRGSLALALRKRPVSTEEVDAAVARIE
ETLLASGAREVPSEHIGELVMNELKRLDKVAYVRFASVYKSFEDIGEFVEAIREMQGPLRPGSGKLRKE
>AHV92268.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92269.1 excinuclease ABC subunit A [Bordetella holmesii ATCC 51541]
MSSHIRIVGARQNNLKNLDLTIATGELVVVTGVSGSGKSSLAFDTLYAEGQRRYVETFSPYARQFLDRMDKPQVDRIEGI
LPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARGAQLFCRGCGKRVRRDTPESIYHSLAERSAAAADPRLVITFPITV
PANFTEEEVKGFLEGQGYTRVHHEDAAVAAPAKSKTRGKKTDAAQARRTLHVVQDRLRFGGAERERVMEALDTALRMGAG
HLAVYAMDADGGDSAVWKYSDRLHCADCDIEYSEVLPSSFSFNSPLGACETCRGFGRVIGIDLGLVIPDENKTLKEGAIK
PWQTPSFKECQDELMKYAPRAGVPVSVPWKAMTQAQRDWVLDGDPDFKGGASAWKHQWYGLHRFFAWLESKAYKMHVRVL
LSKYRSYTPCPTCHGARLKPDALLWRLGSKAEADAVLPPGDARYQRFMPAGVSWTRELLEHLDGLSVHDVMLLPIERVRR
FFDELRFQGAMDAAADLLLTEARARLKFLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHP
RDMHRVVEVMHRLRDAGNTLVVVEHDPQVMVAADRIIDVGPGPGERGGRIVFDGTPDQLRTAPTLTGDYLGGRRHVEAPR
PMPVAPNTPRLLLEGVRAHNLKNVSIELPLGRLVCVTGVSGSGKSTLVQDVLFPALLKHQGKPSEAPGPFDRLLGAEQIA
DVVMVDQTPIGKTARSNPASYVGAFDAIRKLFAQAPLAKERGYTAGTFSFNSGDGRCPTCGGTGFEHVEMQFLSDVYLRC
PDCDGKRFRPEVLEVRVEHLGKSASIDQVLEMTVSEALEFFRGLRDVQTGLAPLADVGLEYVRLGQPVPTLSGGEAQRLK
LAGHLAEAARSGISTAKVAKKGSLFLFDEPTTGLHFDDVARLMHAFRKLLAAGHTLLVIEHNLDVIRAADWLIDLGPDGG
DAGGELVGVGTPQDLMDNPRSYTGRALRDYATSILPPDVVVSTDADRQEAEQAGLTAVIEEPATPYESGTPLQSLMRRRR
QQAGSIEIRNAREHNLKNISVEIPRDTFTVITGVSGSGKSTLAFDILFNEGQRRYLESLNAYARAIVQPAGKPDVDAIFG
IPPTVAIEQRTSRGGRKSTVATMTEIHHFLRLLYVKLGTQYCPDCNVPVEPQNTEQIVARLMREHKGRHLGLLALLVTAR
KGYYTDLAKWAGGKGYTHLRVDGEFIPVSPWPRLDRYKEHTIELPVADLVVDPDNETALREAVKRTLEHGQGVMSILWDL
TPGAEGDAPLRRETGLSAHLQQQHFSVKRACPSCGISFPEPDPRLFSYNSKHGWCEGCFGTGLQLQGFDAEQTGEETAWN
AWYEGEAKACGVCHGQRLNRTALAVRWRDRSIAQLACLPVSEAHSFFTGLVLRGREAEIARDILAEIRGRLDFMQEVGLN
YLALDRAAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNRILLDALARLEGNGNTLVVVEHDDDTIRRASH
IIDIGPGAGIRGGRVVAQGTAQDLMDAPESVTGRYLARPLVHPLQGRHAVDRDTPMLRIKAAHLHNLGNVNASVPVGRLT
VVTGVSGSGKSTLAREVLLDNLSRVVAAGSAEHWVGCARIEGWEAIDRVLEVDQTPIGKTPRSCPATYVGFWDDVRKQFA
DTREARMRGWSAARFSFNTGDGRCPICEGQGMRTIEMSFLPDVKVPCDACNGARFNADTLSVQMRGKNAGEALALEVDDA
LDYFAAHPKIHRPLQLMQDVGLGYLTLGQPSPTLSGGEAQRIKLVTELAKARLTDGVIKTGRASRIPHTLYVLDEPTVGL
SMADVEKLIHVLHRLVEAGNTVVVIEHNLDVIAEADWLLDLGPEGGTGGGQLVAEGSPEHIMSLRKQSHTGQVLAEFLNQ
>AHV92270.1 acyl-CoA dehydrogenase [Bordetella holmesii ATCC 51541]
MLISQYDDTYTTFREQVRRFAREKVKPYAALVDDEARPPTEALQASLELGLPGLPFSEALGGQDGDVFTQIITVEELARV
CAATATTVSTCWIMMLVQRFGSAAQQQMIIEPVVRGEHRSAWGLTEPKGGSDLMGVVTTAKRSANGWVLNGTKRFITNGG
WADWYLIFARTQDEQFGIFLVSKQDAGVSFGAPERKMGLRGSPTSDVILDNCEIPLDRVIGEPGRGGEYIRAGLLASRLK
YAAHGLGIAQGALDEAVAYTQQREQFGRPIADFQMIKGMVADMAMRVEAGRAMLMHAATLTANNLPDARKYASMAKVLCT
DAAMSVATDAVQLHGGYGYLKDYPVERMLRDAKVTQIWEGTNQIQRLMIAKEVYKS
>AHV92271.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MKTAAGAERRLRIALLVDRFGKGFGGAEAYGVELMRVLSERHDVSVVAREYDSDLRLAYLPVRASPRLPSWVRVLYFAWC
AWRLTRGGRFDIVHSHMNGWAGQVQVMHVTPVRYNRMHGAPVIRRLASWLSPRLATYLWLERARVAQVPGRRVVAVSQLI
VEQLHAAYGPRLPVSTILPGVHAAAPADAQRRQATRHELGLGAQQTICLLVARNPMRKGLPALLCALPELPQSYRLLVVG
ADEAARSAVVESGLAARVNLVAPTPQVDRYYEAADIYVHPTLNDSFGMAPLEAMAHRLPVVISPPTYCGFARYLEDGIQA
LILDDPRDGPGLARAIARLGEDEALRARLVLNGLALAEQQSWQAVAARYEALYAGILGERPADGKR
>AHV92272.1 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit [Bordetella holmesii ATCC 51541]
MSTIAIVDYGMGNFHSVARALQYAAPQANIRICNRNEDIDAADRVVFPGQGAMPDCMRTLNESGLAESVLRAARNKPLLG
VCVGEQMLFASSQEGDTPCLNIFPGQVRRFAGPRFADVVTADEQGDTGPVSSDTREERLKVPHMGWNKVRQTRSHALWDG
IPDGAHFYFVHSFYAVPEDPALTVGESDYGLAFTCAVAASNIFAVQFHPEKSAEHGLRLYRNFVDWQP
>AHV92273.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPDIPR
>AHV92274.1 glutamate decarboxylase B, PLP-dependent domain protein [Bordetella holmesii ATCC 51541]
MNDTQRIPVVAVTLDKKVTKFSEFDVSNKVREKGWVLSAYQMPANAESVNSLRVVVRPHINHNVSMKLADDIINACKWLE
QHGGTATPPALHGHPDEKTTPAKC
>AHV92275.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MSIERSSAAEIFDSVRAQVEAGAYAPGSVLPPVRELAAALGVNRNTVAVAYKRLVAAGIAHAQGRLGTMIRPPDGPGQQE
GAPVGGTLVDVASGNPNPAWLPAPRLSVQPARLYGEQTVNVALQAYLRAWFGPDCPGDFEVDVTHGAVDAMERLLGACLV
AGDGVAVEDPCFLSSINLLRLGGFRAVGVPVDQEGMQVAGLEAALAGGARAVIMTPRAHNPTGCNLSRRRATALSRVLAR
YPQVMVIVDDHFALLAEAPFYSVLGRQRARWALVRSVSQALGPDLRVAGVASDSATAQRLRLRLAPGTNWVSHLLQDMVQ
AALLDDRARQLIARASKEYARRRRNLMQALLEFGLVGACGADGLNVWLPVADDSAQAAAMARRGWAVRAGEGFGVERAIH
GLRLTISTLDAAQCHRLARDLRDCLAGTVAAE
>AHV92276.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHI
>AHV92277.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSVRADPNGYTLIVNSVGPIAVNPSLMKLSYD
PLSDLVPMVQIATVPNVLVVPPSSPAKDIKSFLLYAKTRKEPLNYGSTGVGTSSHLSSYMLMDQLGAQAVHIPYKGADAL
NDLLAGRLDFMFATIPSVIGQIRAGKLRPLAVSTLKRSSTLPELPTVAESGYPGFDAGSWFGFFGPKGTPPEVVNTINEQ
VNAALPALGAQMLQEGAEPQGGSPEAFASFIRSEYDKWAILVKKFDAPTN
>AHV92278.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MPARCGACRFRAGGPLELQRGECIAIMGESGAGKSLFLRQIADLDPGVGEIWLDGVAPSSMRGPAWRRLVRYCQAEAGWW
DDAVAEHFSGPAAQTDAVPALLEALGLRANIMQSQVSDLSTGERQRLALLRALRDQPAVMLLDEPTASLDESATERVERL
IRRLLAQGTTALMVTHNPAQAQRLAGRCYRVHDRRLQRL
>AHV92279.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGARLGLRLRGHR
>AHV92280.1 tRNA (guanine(37)-N(1))-methyltransferase [Bordetella holmesii ATCC 51541]
MRIDVITLFPEMFGVVRDLGVTGRAHGQGLWSLHTWNPRDFTTDVHRTVDDRPYGGGPGMVMMAPPLEAAVCAAQAQRQE
QGLDKAPVALLAPVGRRYDQAAAQGIAASSGLILVCGRYEGLDQRFIDRCVTLEISLGDFVLSGGEIAALAVIDAAVRLL
PGALGDSDSALQDSFNDSLSGLLDSPHYTRPEAYEGQAVPAELLSGHHARIARWRRDQSLRLTLARRPELIGQARANGWL
DHADECQLALLQGLEPPVDPRKRRRRKPTGMIHAKKKVHRGIAWSRA
>AHV92281.1 NMT1-like family protein [Bordetella holmesii ATCC 51541]
MLRKLFATALLAAGLGSAAQAAQPALEIGYLPILPDAQLFVALESGSLAADGVTQPKLVQFQSGPALTQALIAGQLDAAY
VGIGPALVARAKGADIKVVASNIVEQVGVLALGPLAPYFASGDPSTAFARFAKEKGRKAVIASYPKGAVPEAALQYWLRN
VLKADLADIDFVYQGEAQIQQSLMTGAIDGAAVLEPTTTSVLRRQPDARVVARGSQLFPKQPGAVLLVRETLIKNHPEIV
QALVRSQIAATAMLRDDPAKAAGYVQKFVGGGRLPLDLVEAAIRNSRDQFEADPRAIEAATAQLQDFQAQLGTQAERVDI
GQLFDTRFYVNAKWTPA
>AHV92282.1 transposase family protein [Bordetella holmesii ATCC 51541]
MAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92283.1 response regulator [Bordetella holmesii ATCC 51541]
MRLPIIFLTSRNQEEDLVQGLQAGADDYIVKLLRPAELLARIGALWRRMQPAAGDNPPFDVGPYHIDPARHAIELRGQPI
PLAPKEYELALLFLRNIGRLLSRDLLAETVWNREIPPTSRTLDTHLSNVRQKLQLRPQNGLRLSSSYALGYRLETISDLA
H
>AHV92284.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MFGRSQKPVFRPSLYQPGKRSRRLPRWLVLRFIGIALGAGGVLFLQANYGPQRLTVEQSEQLHTELSAANVDRQRLQSQL
DDAVAQRDSNKSTHEQLTTDLAQARSRVEALNQELALFQDAVPPDPRGGDIGVRSARFKREPGNLDYQVLVMRDTDTGKP
FQGTLELVVDGNYANGKRDRITPEAIPLTLSRYDHAVGKLATPAGFTPRSVTIRVLDAQQRQHAMRIYYVRNADGARVN
>AHV92285.1 lipopolysaccharides biosynthesis acetyltransferase [Bordetella holmesii ATCC 51541]
MSIHPSAIVDEGARIGAGTRVWHWVHVCGGAEIGENCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMV
FTNVYNPRAAIERKSEYRDTLVKQGATLGANCTIVCGATIGRYAFIGAGAVVNKDVPDFALMVGVPARQIGWMSRHGEQL
DLPLSGDGQATCAHTGEHYILTNGVCQLA
>AHV92286.1 putative transposase [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERSM
GVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVSADVILTHRVGVNLTHLGDDGGLLAADNVDS
GASSGDQGNGASRRQHSGDGQAAGLLTQHDQAVSA
>AHV92287.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MNRCIFVCAGVAAAAAAAGSYLYTRSRSTPPAVAAAAPAAPDPLAALLAMSLPDLDGNAQALSQWRGQLMVINFWATWCA
PCVKEMPELDELQKKTPNVRFVGIGVDTADNMRKFVEKIPVSYPLLVMGAGAVDVLRGLGNPAGGLPFTLVLNANGSIRQ
KMLDQIDPAALEKSILSLPA
>AHV92288.1 carboxymuconolactone decarboxylase family protein [Bordetella holmesii ATCC 51541]
MSQSKQQYDEAEKFKAGLQVREAVLGKDKVKQALWDADAFNAPMQQFATEFCWGASWARPGLAHRTRSLLNIAMLAALNR
PKELETHVRGALVNGCSIEEIQETLLQAAVYAGVPAGIEGFRTATPVIREHLINETAK
>AHV92289.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MPSAVTYAVRKLEDALDVLLFDRSGHRAQLIAAGQALLDEGRHLLRSLDDLACRVKRIATGWEMELRVAVSAVLPLEPLL
DLVGDFQALNSGTSLRLSEEVLSGAWDALAAGRADLIIGADASGVPAGAYHSMAMGQTQMAFCVAPQHPLARLERALTAQ
DIAEHTAIVVADTSRDLPARTRGLLPRQSVIVMPTMRAKLQAQIRGLGCGYLPLTLAAGAITTGQLMSCPVEGLVVPTEH
VVYAWRPERPGRHWPGGWKSYARRDCAKASWA
>AHV92290.1 prokaryotic glutathione synthetase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MHVLFIIDPLPQLKAYKDSSVAMMRALVARGHTLSVALQGDIYIEAGTVCAHSQPIELVDGADLHGHDWWRDTGAQSDVP
LAEFGAVLMRKDPPFDMEYVYSTHLLEYAQAQGAKVFNGGAAIRNHPEKLAITEVAELTPQRWSPATWTASRPFMPCMAM
>AHV92291.1 molybdenum cofactor synthesis domain protein [Bordetella holmesii ATCC 51541]
MSPIRRNHPDELIVGLVSVSDRASAGVYADQGLPALRDWLGQALVSPWQAVEQLVPDEREAIASALVALVDQAGCDLVLT
TGGTGPSRRDVTPEATLDVATRQMPGFGEQMRQISLQFVPTAILSRQVGVLRESAGHAALILNLPGQPKAIRETLEGLRN
DDGSARVPGIFAAVPYCIDLIGGPYIETREAIVKAFRPKSALRPARG
>AHV92292.1 hypothetical protein D560_0742 [Bordetella holmesii ATCC 51541]
MSELLRPKLELPAGHGKVLLHSCCAPCSGEVMEAITASGIDYDIFFYNPNIHPVKEYEIRKQENIRFAEKHGIKFIDADY
DMDNWFDRVKGLENSPERGERCTVCFDMRFERTALYAHEHGYDTISSSLGISRWKDMNQINGCGERAAARYDGMLYWTYN
WRKGGGSQRMIEISKRENFYQQEYCGCVYSLRDTNRHRREQGRERIHIGVKFYGKEELLNEETL
>AHV92293.1 ribosomal protein L25, Ctc-form [Bordetella holmesii ATCC 51541]
MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTATPLNIEMDHNEIFHALRKEQFHASILTMALEGGKSEQVLLRSVQWH
PYKQQVMHVDFQRVDANQALHTKVPLHFINAETSPAVKLSGAIISHVVTEVEVTCLPKALPQFIEVDLGNLLGGGSVHQK
DIVLPKGVTFTHPNDEQVIAAAVVKGGAADADEAPAA
>AHV92294.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLRQIAFRNIIPFTLTLMHGMACDAFHRVQRLSSDWHANSFAGSTVRKITRGIWAVDLLNDTLLTALLPSVVMLVGATVL
LGVSWPLMGLVVGLGALLYIGVAVVMALRYVAPAARLSNAWDTRMGGALADAVSCNAVVKAFGAESREETRFEGVLAKWR
ARTRRSWLRVTLNGGLQGVMMTAMQAAMLGVSLYLWINEKASVGDITFAMTMFFVLKGYLREVGMNLRNLQRSINDMEEL
VMLDTQPLGVEDRQGTRAIKVADGEIRFEHVTFRYGAQQKPLYEDFSIRIAPGERIGLVGHSGSGKTTFIKLIQRLHDLD
SGRITIDGQDIALVRQASLRRQIAIVQQEPILFHRTLAENIAYARPDASRAEVEEAARQASAHDFIMALPKGYETLVGER
GVKLSGGERQRVAIARAFLADAPILILDEATSSLDSESEVLIQAVMTRLMQGRTTLVVAHRLSTVRALDRLLVMDHGKVV
EAGSHEALIRREGGIYRRLFERQALALTEGLDEALPRG
>AHV92295.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MRVPKLENCSFHHTAAAAEQAGFRPCLLCRPELAPGHSPMDARTSLARRAARLMDDHGGRHASVRALAQELGCTDRHLRR
VFMAEFGVNPIQYLQTSRLLLAKNLLTDTDLGVNCQ
>AHV92296.1 radical SAM superfamily protein [Bordetella holmesii ATCC 51541]
MMSTEHSLSAGYGSPAAAPAASRGRGAVTNVRHRFEQVEREAFDDGWFGGDDSPAAFDASLDEIQDEPKRPPRSEPAEAE
ALGVTEMAPEPGRPSAAVGLPQSATQHFIPVVAVPRTTVRPEQARKLLSRNDSPDIPFDVAVNPYRGCEHGCVYCYARPT
HAYLGYSPGLDFETRLVAKANAVQALRAELARPSYKVSPINIGSATDVYQPIERTWRLTRGLLELMVETRHPLTLVTKNS
LVERDLDLLTTLARDRLVTVFISITTLDADMARTLEPRASAPWRRIETVRKLAEAGIPVGVLVAPVIPFINDESMEQILE
AASAAGACSASYTVVRLPWEVKDVFETWLHTHFPDRAQRVLHRIEDMREGKRNDSSFDTRMRGTGIWADLLRQRFELAVR
NLGLGRLRPELALDHFVPPVIAATVRRGRGSASDAAREAGQMALFED
>AHV92297.1 thioredoxin family protein [Bordetella holmesii ATCC 51541]
MSGFDPSAVFETFGMKPVSSANFDQVVVNATGDDLRCVFLWGEDCYNCNVFKQTALLHRDALLELGLSWFQADVYADPAL
GQRFGLHGVPTFVLFRGGKRLGRVTGWPGLPQFSGAIRRLQTGS
>AHV92298.1 glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein [Bordetella holmesii ATCC 51541]
MIDHLDHLVLTTTNEAACVDFYVGLLGMRLESFGQGRKAFRFGNQKINLHIKGREFEPKAHLPVPGALDLCFIASIPLDE
VIAQINAKGAHIIEGPVRRTGAEHPLRSIYLRDPDLNLIEISERAE
>AHV92299.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGREGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92300.1 flagellar motor switch protein FliG [Bordetella holmesii ATCC 51541]
MKSDAKPLDGMTRSAVLLMSLGEDAAAEVFKYLTAREVQQVGAAMATLKQVTRGDVAGVLEEFRQEADQFMAVTLGSDDY
IRTVLTKALGSDRAAGLIEDILEAGDSGSGIDALNWLDPHTVAELIGDEHPQIVATILVHLERDRAAGVLSMLPDRLRNE
VMLRIATFGGVQPAALSELTEVLNSVLAGQGAKRSKMGGVRTAAEILNMMNSNQEESVVESLRERDADLAQKIVDEMFVF
DNLIDVEDRGIQLILKEIDNDTLMVALKGATEELRAKFLRNMSSRAAETLREDLDAQGPIRMSKVEGEQKKILQIARRLA
ESGQITLGSQGEDSYV
>AHV92301.1 heat-inducible transcription repressor HrcA [Bordetella holmesii ATCC 51541]
MLKALIERYIADGQPVGSRTLSKVFDLSPATIRNVMADLEELGLIHSPHTSAGRVPTPRGYRMFVDSLLAVHPYQFEPAN
MSELLPMVEPSRAVNAAAALLSNLTQFAGVVLTPKRAQVFRQIEFVRLTDKRVLLIIVTPDGDVQNRIMQVQRDYAESEL
LEAGNFFNQHFSGKSFDAVRRTLSTELTQLREDISRLMQAAAEVGAEAADEGDSVVISGERKLLDVTDIASDMDRLRKMF
SLFEKKTDLLQLLDVSSRAQGVQIYIGGDSQLVPMDEVTVVTAPYGVDGQIVGTLGVIGPTRMSYERVIPIVDITARLLS
NALSHNQ
>AHV92302.1 transaminase, acetylornithine/succinylornithine family protein [Bordetella holmesii ATCC 51541]
MNSPLANIYSRLPVSFTHGKGVWLWDPQGRKYLDALAGIGVSCLGHAHPRLVRAIAEQAARVIHTSNIYEVPQQTELAAR
LNALSGMEEVAFSNSGSEANEAAIKLARYYGYQRGNTHAHVITMESSWHGRTLGTLAATGSEKARKGFEPLPTGFIQVAY
NDLQAVRQAGDREPRVTAVLLEVLQGEGGIRPFDIAYLQTLRELCTERGWLLMIDEVQSGVGRTGKWFAHQWAGIRPDVM
TLAKGLAGGVPIGAMLARGPAAGVLTPGSHGTTFGGGPLACAAGLAVLDTLEQDGLLANAERIGSYLQHALGQALDGVQG
VREVRGRGLMLGIELDRPCGVLALQALQAGLLINVTRDRVIRLLPPLILTEAEADQIVAILVPLIKTFLADQA
>AHV92303.1 hypothetical protein D560_3870 [Bordetella holmesii ATCC 51541]
MVGLIPASSYRKPGKRPPAACRVFYEQAPLGETRGQTDCGLK
>AHV92304.1 flagellar M-ring protein FliF [Bordetella holmesii ATCC 51541]
MNQQASLSSTLLARYPFLAKARALPKPLLLAGAAALIAIVVAVSLWSREPDYKVLFSNLDDRDGGAIVNALGQMNVPYRF
SDNGTAILVPGNRVYDARMQLASQGLPKGGSVGFELMDNARFGASQFAEQINYQRGLEGELARSIEAMHSVQHARVHLAL
PRQSLFVRDRQPPTASVLLTLQPGRSLAQAQVSAISWLVASSVPDLAADNVSIVDQNGRLLSSPAGEGRGMDADQMRLVR
EVEQRTVERILTILNPLVGPGNVHVQASAEMDFARREETSESYRPNQEPGQAAVRSQQTSDSRQIGNTAASGVPGALSNQ
PPAGVQAPVTNPAPQPPRQPSPTQSATGTQAQQQAPGSERRDATTNYEVDRTISHVKQPVGQLKRLSVAVVVNYLPGKDG
DPQALPPEELNKLTNFVREAMGYSEPRGDSLNVVNSQFNDSPPVVPMWRDPELLAMVKTALGWVFGLLIALWLYRKIRPV
ITGYFYPQVSPEEAAASRAEAEREALATARAKEVNRYEDNLQRAREMATKDPRAVAMVLRAWMTKDEK
>AHV92305.1 homoserine dehydrogenase [Bordetella holmesii ATCC 51541]
MGLGVVGGGTWSVLTRNAEEIARRAGRRIEVSRIAVLDVEKARARVGDAIEVTTDVQALVHDPEIDIVVELIGGDTLARE
LVLQAIAQGKHVVTANKALLAKHGNEIFAAASARGVMVAFEAAVAGGIPIIKAIREGLTANRIQWVAGIINGTTNFILSE
IRSRGLPFAEVLAEAQRLGYAEADPTFDVEGVDAAHKLTLLASLAFGIPVQFDRAHIEGISQLAQEDIAHAERLGYRIKL
LGITKRRAEGIELRVHPALVPAQRLLANVEGAMNAVLVRGDAVGPTLYYGQGAGEEPTASAVVADLVDVTRLHTADPGNR
VPHLAFQPDAMADTPILPIDQISTSYYLRLRVDDQPGVLADIARILADRTISIGSMIQQPSHIGGADIIFLTHESLEGDV
NRAIAEIESLAFVRSKVTRLRVENLT
>AHV92306.1 outer membrane assembly complex, YaeT protein [Bordetella holmesii ATCC 51541]
MQKRHTQRQPFKAVKLPSLIAALLLPALAHAFDPFVVRDIRVEGIQRTDAGTVFGYLPVKVGEKFTEAEASEAIRRLYAT
GFFSDVQVRTENNVVVVVVQERPTIASISFNGMREFESKNIIKSLSQVGFGEGRIFDQSMLERAQYELKEQYLSKGKYGV
EVTATVTPLPRNRVGVSFDVFEGDVAKIREIRVVGNKAFSESELLDQFDLTTPGWLTWYTNTDKYSREKLEGDIERLRSF
YLDRGYLEFSSEPPQVTISPDRKDIYITVTIHEGEPYKVRSVKLAGNLLGLDAEIEKLIEIKPNEVFSAAKANNSAKAIT
DYLGELGYAFANVNPNPQLDREKHEADVTFYVDPSRRVYVRRIQIGGNTRTRDQVVRREMRQQEAAWYDAGDIKVSRDRI
DRLGYFNEVNVKTDPVPGSPDQVDVNVDLKEKPTGMINLGVGYGSTDKAILSAGISEDNVFGSGTNLSLQVNTSKTNRAA
VLSHTDPYFTKEGISRTTSLYYRVTEPWNNNDGDYRVKSMGLGMNFGVPISEYDRIFLGASLERNQINLYSNSPQAYRNF
VDQYGDSTNAVIFSTGWSKDTRDSALAPTKGSYTRLKGDVSTMDLKYYLLTAQQQYFLPLGRDYTLALNGMADYGHSYGG
KDYPVIKNVYGGGIGTVRGYDGASLGPRDTLTGDYLGGSRRLIANAQLYLPFPGANKDRTLRWFLFADAGQVSAGSGMSC
TAGKSSDPVEDTCGWRYSAGIGLSWQSPLGPLQLSYARPLNSKPGDDKQSFQFQIGTGF
>AHV92307.1 mmgE/PrpD family protein [Bordetella holmesii ATCC 51541]
MTLSPSAALATFASQLRYEDIPAPVLRRAEDLLLDTLASILAGASARPVQIMADYAQTMGPADGPSEILVNRRRSTPLFA
AMVNAASAHVVEQDDVHNGSVFHPAAVIFPPALAVAQALGLSGKDLLTAAVAGYEVGIRIGEFLGRSHYKIFHTTATVGT
LAAAVTVGRLLRLDPEAMLNALGSAGTQSAGLWEFLRDAADSKQLHTAHAVAAGITAAYLARDGFTGARQIFEGPQGLAA
GMSSDADRKRLTDRLGQRWALAETSFKYHASCRHTHPAADALQAVMRDNHLQASDIASIEALVHQGALDVLGPVTHPATV
HQSKFSMGTVLGLIALKGRAGLAEFDAALEDPAMASWRERTIMTLDEEVDQAYPQRWIGKVKVRTTDGRELTARVDEPKG
DPGNTLSRAEIEAKMRSLGQYAGAARPEELQRLIDAVWGMAEQAKVGTLLPA
>AHV92308.1 bacterial transferase hexapeptide family protein [Bordetella holmesii ATCC 51541]
MSGLIIMHIFLAQAYLPGMVRRFIAARHPEASVHEIECLPNLGPDPAAIATLECPEKDCLFFGDGVFSNSARTAIFTRLK
ALGLALGTAVFDEALVSPDARIGTGSILYPHCVVDAKAVIGFNTIIGPGTIIEDGVTIGNNCFIGAHCVVKRGSEIGSGS
YLADGCVVGGVHGYRGESTSVKLGRGVVVYDTLAIRQDLEAGVVRDSLVADDIRVLR
>AHV92309.1 malonyl-CoA decarboxylase family protein [Bordetella holmesii ATCC 51541]
MPARDVPAREQVEGNAAGGGLMARLGRLLERERLADTEILALFQARATDVRANKLAAGWCAAYMQGDGARRRSLLAGLTR
AYARLDSAQAETARLFKRFNAQPEGLRFLVSLRADMLRWRKQVAGLQALEPVLEELLSSWFDVGLLELRPLTWDSPASLL
EKLIQYEAVHAIQSWDDLRHRVAQDRRCYAYFHPQMPDVPLIFVEIAFDASMSDSVQSLLDTQAPAQDLTRARWAIFYSI
SNTQEGLRGISFGNFLLKRVIERLLQELPQLKSFATLSPMPGFNAWLARLKGPEVEQIVRGEKGGGKRSPDGQQWVARLR
RAARGKPSEALRRAGVKLASHYLQSLRNDRPADPVARFHLGNGARLERLNWAADVSDNGLEQSCGMMVNYLYVLDDLDAN
LARLQDGKITVSRGFGRVA
>AHV92310.1 bacterial Transmembrane Pair family protein [Bordetella holmesii ATCC 51541]
MTQAQKTLKERFVHAFLFEILAIGLCAPVAAWPMGKSLFEMGVLTAVIAWIALLWNMLYNAGFDRLENRMGWTRTLRLRV
VHALGFETGLILIVIPLAAWWLQISLWEAFVLDIALVLFYLPYAFFYNLAYDKARVRVLRWLDQRNRYAQA
>AHV92311.1 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Bordetella holmesii ATCC 51541]
MSTIPMDIAASQRLEQACQILNLPAAPEQQEKLLRYMAQMQRWNRTYNLTAIRDPEQMLIQHLFDSLSVVEPLARTLHGR
PAKIYDVGSGGGLPGVVLAIMQPDWEVTCVDAVEKKTAFVQQMAGALMLPNLHAMHARIERVAPADCDIVISRAFASLQD
FANWAGRHVRPDGTLVAMKGKVPSEEIEALPTSWQVDRIEPLQVPELDAERCLIWMRRSQGTL
>AHV92312.1 putative oxidoreductase [Bordetella holmesii ATCC 51541]
MVITEGAHVHSDMQAPGGEPGRVGGHRHALPMPRGGSAEEVAAGIMCRRSPPAFCSIASSIDVSGG
>AHV92313.1 putative type 4 prepilin leader peptidase [Bordetella holmesii ATCC 51541]
MAWLAFNAAVVVYDLGWRCVPDWLVSLAALAQLAWLAAHSLSGTWPPVGPHGWFDAWLPFVLGLLFVAL
>AHV92314.1 putative RNA polymerase sigma factor fecI [Bordetella holmesii ATCC 51541]
MLSPSTLLSDQQLLVRIHTEDRAWLLGRLYTRLRNIEDAEDIAGDTFVQLIQTPRLASVREPRALIITIAKRLVWKLWRR
RELEAAWLESLFAQGEALAPSPQEQLSALQTLQQVDQILDGLSFKARAAFLYSQLDGLTHKEIAASLGVSVSMVRQYIAQ
ALARCYALAEST
>AHV92315.1 aldehyde dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MTLAQYGCFIDGVWGAAGSGEMLDVLDPATGEPIARIARGQAGEVDAAVQSARRALRGWAECPPVQRARILAEIARRITL
EQDHLARLECQDTGKPLKQAQADAVAAARFLNTTRGWQTRCSEPRSPWGRSILISPCANPWG
>AHV92316.1 acyltransferase family protein [Bordetella holmesii ATCC 51541]
MTSDRYERLDAASWLAALAVVMLHSAAQTVSDPAIYASGGWLAANLYDSAVRWCVPVFVMISGALLLDPQRPLSPRVFYR
RRLARIQIPLVFWTVFYLLWSTTLAGFDQGRLDVSFWPRKVAEGRPYYHLWYLYMIVGLYLFAPAVRLLYARSTPAARKL
WVIGILGVAILDSLYRQALGADPGFFLTWFLPYLGYFVAGRMIFEGQWRMPRPGLVLLTGIALTAAGVLWLSSAQSLNLY
FYDYFSLTVPLMSLAAFQWFVDTPALPRLPALAPLTFGVYLVHPALLDLTQRAGLVPHDAAAIWRLPLVTILVFGLSAAV
VWALRQHRLTRPLV
>AHV92317.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MSVTDAERPHARPVTLLLNIAHAIDHMFLLIFAAAVATIAADFGFAQWEDLMPYGVAAFFLFGIGSWPSGRLGDLWGRRR
MMLLFFFGIGASALLCALARDAWQLAGGLALVGLFASIYHPVGIPMIVQHAAKPGAVIGINGLAGNLGVAVAALVTGYLV
QTLGWRPFMSWPRWRRWWSGVSSIVCR
>AHV92318.1 hypothetical protein D560_0797 [Bordetella holmesii ATCC 51541]
MQIRINPDVSLTAKPETITQLLQIMQPKPLYFYTVVQHWNPGRLFA
>AHV92319.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MLSVVERKLAALPVSVQLQLPDGTVLGPPQAKVRFAARDKGALAHLAEGSVGVLGQDYVEGRIDIQGSMRDVMAAAAALL
PGSPVDAARGGWLTELIRKVTSVWRHSVERDAKQIEFHYDLSDEFYALWLDPRRVYSCAYYREPGMTLAQAQEAKLDLIC
RKLKLRQGERFLDVGAGWGGLLLWAAENYGVDATGITLSRNQHAHVNRLIESKGLSGRVRMELLDYRKLDETQPYDKIAS
VGMFEHVGRAQLPGYFAKLRNLIKPGGLIMNHGITAAGLYNSELGSGMGEFIEKYIFPGGELTHISSVLEAVTAGGLEAG
DVENLRPHYARTLWAWSDELETKLEDASRILSGEQGARSLRAYRLYLAGCAMAFEHGWIALHQILVSTPAKGDDQELNYP
PDRQYPWRREYMYQDIKA
>AHV92320.1 hypothetical protein D560_0672 [Bordetella holmesii ATCC 51541]
MTTAALPAPTPWRDKLNGVLFVALMAGAVVQLADIPAIKQLGFSPLVVGIVCGMLYGNFLRGTMPADWGVGVNFTARRLL
RIAVAFYGLNISIQQIMAVGLPGLAVSVSVVVGTLVIGTVVGQRLLGLDRDTAMLTSAGSAICGAAAVLAFEPTLRAAPH
KSAVAVATVVLFGTLSMFLYPVAYHAGWIDLDTQALGIYIGGTIHEVAQVVGAASNIDPATTEVATIVKMTRVALLVPVL
LVLGMWLRSSRSHDAAQGGNRLPVPWFAVGFLVLAIINSLNILPADAITAIRRLDIFVLTMAMTALGIETRFAQIRKAGP
RVMALGLVLYVWLIFGGYAIVKLAV
>AHV92321.1 biotin--[acetyl-CoA-carboxylase] ligase [Bordetella holmesii ATCC 51541]
MQWVASTGSTNADLLARARQSQTPKPWLLGAHLQEAGRGRAGRAWKNRSGATLMFSCAFDVHLPAPQLPALSPMAGLAAC
EALRHLSAQTGVCVKWPNDVQWHEAKLAGVLAETTRNPDGNGHTVVIGMGLNLRDADMLSANLQRAIADWSQVDAQDRVR
DAADIVQATALAWQQAVADLEQHGFAAFVQRYAQADALHGRSVNVIDRGEVLYGGQAAGVDVLGRLQVQCDHGLMAVTAG
EISVRPQP
>AHV92322.1 receptor ligand binding region family protein [Bordetella holmesii ATCC 51541]
MPSTPLLRARLAGAALLALAACQAQAADPIKVGFMLPFSGTYAALGTAIENGFKLYVQEQGGKLGGREVQYFKVDDESNP
AKGPENANRLIKRDKVDVVIGTVHSGVAMALAKAAKDSDTTLIVANAGADAITGPMCGPGIFRTSFTNWQPAYAMGPVAA
AKGHKTAITVTWKYAAGDEAVAGFREGFEKAGGKVVKDLTVPFPNVEFQSVLTEIAASKPDMVFTFFAGGGAVKFVQDYA
AAGLGKNIPLYGSGFLTDGTLQAQGEAAQGLLTTLHYADGLNTPRDQAFRADYSKAYKQTPDVYAVQGYDAAQLLQAGLK
SVQSDTTRKADMRSAMRAATIDSPRGPFTLSAAGNPVQDIYLRKVDGLENKVVDVAVKKLADPARGCKL
>AHV92323.1 ectoine hydroxylase [Bordetella holmesii ATCC 51541]
MISTAQDPYASRTDRAAAIIARQDPVVYGDGSYADALSSEQVQSYENNGFLLLENLFSSEEVAALLAEVERMTRDPAIVR
REEAITEPGSNAVRSVFMVHVLSPILARLSRDPRVANVARQILGSEVYIHQSRANMKPGFKGKEFYWHSDFEIWHVEDGM
PAMRALSCSVLLSDNNETNGPLMLVPGSHRQFISCVGQTPREHYKHSLKKQEYGVPDPVSLQLLAEQGGVQTMMAPAGSV
VFFDCNTMHGSNSNISPWPRSNVFMVYNSMENTLTAPGTGSTRDRSISPRVRPSRPSRRWTRSNWSSVELGTAGVRARGR
I
>AHV92324.1 succinyl-diaminopimelate desuccinylase [Bordetella holmesii ATCC 51541]
MSTVLDLVKDLIARPSVTPDDKDCQQLLGDRLARVGFTCETIARGGVTNLWARRGSQAPLVVFAGHTDVVPPGPREKWDS
DPFLPTERDGFLYGRGAADMKSSIAAFLVAVEEFVAANPAHDGSIAFLLTSDEEGPAIDGTVIVCEALQARGETLDYCIV
GEPTSTADVGDVCKNGRRGSLSGELTIKGIQGHVAYPHLARNPVHQAAPALADLVGIEWDKGNDYFPPTTFQISNMKAGT
GATNVVPGEAVVTFNFRFSTASTPASLKSRVHEVLDRHGLEYDLVWELGGEPFLTARGPLTDALSSAILAETGLTTELST
TGGTSDGRFIAKICPQVIEFGPCNATIHKINERIALDSLTPLKNIYRRTLENLLLAH
>AHV92325.1 hypothetical protein D560_3332 [Bordetella holmesii ATCC 51541]
MKDRALYRMNCERRASSVRLVQFVQAHQKEGLLPLGSMSVPY
>AHV92326.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MKTDTSYRLGVLSRTLAAIVGGYSATALITSALALLLSRSIAPATSVLASSLLAFAIYALLVLPVFRVATALRAWIWVMA
WAAGAALLLLLLRVLS
>AHV92327.1 integral membrane, YjbE family protein [Bordetella holmesii ATCC 51541]
MLEFFQTLSWAAVFQIILIDILLGGDNAVVIALACRNLPPKQRMQGILWGTAGAILLRVVLIAFALTLLNIPFLKIVGGV
LLLWIGVKLLIPEDDGHGNIKGSVSVWAVVKTIIVADFVMSLDNVIAIAGAAQNAHADHQIGLVVFGLIVSVPIIIWGST
LVLKLIDRFPTVVLFGAALLGWIAGGMLVTDVFVVNQIGEQLQAVKITVEVVGALLVIVLGRWLASRKKNASKESSHESA
>AHV92328.1 hypothetical protein D560_1694 [Bordetella holmesii ATCC 51541]
MTHQELDQVYTELAHTLARVGQDRAPLLLSMVCLALLGRQGESQAALEIIRQAETAL
>AHV92329.1 protein-(glutamine-N5) methyltransferase, release factor-specific [Bordetella holmesii ATCC 51541]
MQIKDLLQDRRLPRLEARMLVEQVWRRSRAWLLAHDDDPVDAAQAAAYEALAQRRLAGEPMAYVIGHREFMGHVFQVTPD
VLMPRPDTETLVEAALAFLRDRPRARVLDLGTGSGAIAISIALACPEASVTATDLSAQALAVARGNALALGARLAFAQGS
WFEAVGPDQQFDLIVSNPPYIHAEDVHLGQGDLRFEPRSALTDGANGLAALAEIAHQAPARLLAGGALWMEHGWDQALAV
RALLQEAGLREVASRQDLAGIERISGGFL
>AHV92330.1 cupin region [Bordetella holmesii ATCC 51541]
MSLHHASPGELINLKPLGAALRDTASQALVRSNQIEVLRLILKAGHSQPSHDIAASAITLHCLEGEVSLTAYGVSQPLSA
GTLVLLAAGVPHHLTAITDCAVLVTLCLNRAPQ
>AHV92331.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MNVSTRQLRAFVSAADQQNFTRAATEIGLSQPAFSALIKSLEEELDAQLFVRNTRNIELSPFGKLFESFARRSLNETTTA
LQHLQDYAAGRIGSVQVAALPSVAASWLPPVFRQFRTQYPGVTTVLRDGMSQNCVELLAAGDIDFAIATEDRHTAKLERQ
LLWQDQLHLVCPPDHPLARQRKRVTLEQIVQYPIVNFVSHSSVRQHVDAAFSPYPLNTVLEVEHLATASAMVESGVGLTI
VPSLTLYQFRRPSLAIVPIEDSSFKREVFILTHKNKLLALPARAMRDMVIAHVAGLKRGS
>AHV92332.1 hypothetical protein D560_1180 [Bordetella holmesii ATCC 51541]
MTQTAASTTATCLRNYFHAKDENRPWYMARAFAGDALLEMRLNTQAIAFPPQARGLEAITDTLVRKFGQTYENVFTFYLT
SPPEAPALTGFSCDWFVGMTDKANGSVRVGAGRYDWLFQTEPYLARQLSITIDVMEVLPPAAQPAVLGWLTHLPYPWTDA
KRIVSAAPPIEALAPVMHWLRHQTSPATQTPP
>AHV92333.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>AHV92334.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKAIWLAAACMAFASTGASAQDYPTRAISMVVPYAPGGSTDGLARIVANAMGKNLGQTVVVENLGGGGTMIGNQKVTRAA
PDGYTITFGNMGSLAIAPSLYPKSNFDPRRDMVGVGLVATVPMVLSVSKASGVKTLPEFVARLHEKPNTVNVGNAGSGST
SHIAAANFLHVTKSEGVQIPYRGAGSAISDLMAGTVDAVIDQTVTMIPLHEGGRVRALAVASPARLPQMPDVPTFAEAGV
PAFDMSVWNGIAAPAGTPPEVVKRLESALAAALKDPAVRESLQKLAAAAPTKEQEGAAAFQALIARDVPRYEEFIRVANV
TVN
>AHV92335.1 hypothetical protein D560_3755 [Bordetella holmesii ATCC 51541]
MSASMPHYATFATRLPWLVLLAGCAVGPDFHPHAPKARP
>AHV92336.1 hypothetical protein D560_1256 [Bordetella holmesii ATCC 51541]
MTLILVWVLNAVALLAVAYLLPGIAVASFGSALLAALVLGLLNMLVKPVLVVLTLPITIVTLGLFLIILNALLFWLAGSI
LRGFQVNGFWWAVAGAILYSIISGLLSYLIP
>AHV92337.1 NADH-dependent formate dehydrogenase delta subunit FdsD family protein [Bordetella holmesii ATCC 51541]
MDANNLIRMANRIGDFFEAYPDPDEALEGIANHIEKFWEPRMRWQLLDFLVAHPDGLAPGVSLHPLLRQSVIRNTARLTP
RQPRRR
>AHV92338.1 transketolase, thiamine diphosphate binding domain protein [Bordetella holmesii ATCC 51541]
MTTTEHLDRIHSPADLRKLDRRDLKPIADELRAFVLESVSRTGGHLSSNLGTVELTLALHYVFDTPHDRIVWDVGHQSYP
HKILTGRRDGMAQLRQQGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVARQHIAVIGDGAMSAGMAFEAM
NNAGVTPNINLLVILNDNDMSISPPVGALNRYLARLMSGRFYATAKNVGRAVLQHVPPVLELARRLEEHAKGMITPATLF
EEFGFNYVGPIDGHDLEALIPTLQNLKTLQGLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQKAKTRASRRSRR
CLANGCAIRRKPMSGWSASRRPCGKAAAWWSSKSAFPCAISTSASPSSMR
>AHV92339.1 bacterial transcriptional regulator family protein [Bordetella holmesii ATCC 51541]
MSRQPSASVTTPDSDAGQPQIAIQVIERAMSLLDALAAQPEPVTLKELSATTGLHASTAHRILNDLVIGRYVERVDNGLY
QLDMRLLELGSLVKGRLNVREAAISIMRNLHRSTGQTINLSVQQGDEIVYIDRAWSERSGMQVVRAIGGRAPLHLTSTGK
LFLSTWDQRQVRAYALRTGLAGHTRNSLTEPDRLERELALVRRHGYARDNEELELGVRCIAVGIRDDTGRLVAGLSISAP
AERLQDEWVRLLTDAAATISEALGFEPDGHPGVAAA
>AHV92340.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVEWVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92341.1 transcription elongation factor GreA domain protein [Bordetella holmesii ATCC 51541]
MSAIPLTVRGAERLQQELHRLKTIERPSVINAIAEARAQGDLSENAEYDAARERQGFIEGRIAELEGTLSNAHLIDPTAL
DAEGRAVFGATVEIEDLDSGDRLTYQIVGDVEADIKSNLISVSSPVARALIGRSEGEVVEVKAPSGVREYEVIGVRYL
>AHV92342.1 hypothetical protein D560_1478 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSKR
>AHV92343.1 uroporphyrinogen-III synthase HemD family protein [Bordetella holmesii ATCC 51541]
MSPLAILTRPAGRNEALAARLRNAGWDVRLWPALLLDTLPAPAAGHPRPEDFDLVIFVSGNAARIYLGQVYPAHGDWPAA
TMAATVGPSSARSLLSSGLFGANTTVLYPDKAAPTHDSEALWRVIRARAVMPRKVLLLRGTRGRDWLADQLRQAGAEVTV
HAIYRRLPAQWDAAQLESVRLWAAQGRQVTWLMTSAEGIDAIGAQLTRAGLQTWWPQCRYVITHPVLRRCLPLAGEGAAA
MVKECMPADEAIFEAFAAA
>AHV92344.1 hypothetical protein D560_2456 [Bordetella holmesii ATCC 51541]
MAARSWQDKLAAVAALDDGQGIGADGALTPPPGLPGRPDRPELVPPAQVKQRSVRNEQGRAALLHALAHIEFNAINLALD
VIWRFPGLPDQFYQDWLQVAREEAYHFDMLRVHLTSHGYDYGDLPAHGGLWEMAEKTRGDLLARLALVPRTLEARGLDAS
PLIRDKLAQAGDMRGAAILEIILRDEIGHVAIGNFWYRHCCVLQGRDPLTTYAELSAQYGAPRLRGPFNVPARRAAGFVD
AEIEALERQAQA
>AHV92345.1 nicotinate-nucleotide diphosphorylase [Bordetella holmesii ATCC 51541]
MSIKIAAATSAQETVRTFPSLPQVMLEPLVRAALLEDLGRAGDITSDAIVPLEARGQTRLVARQSGVLAGLDLARLAFRL
VDPEIRFQMLLADGARLEPGSEIALIEGPARGMLTAERTALNFLGHLSGVATATASIADAIAHTRCKVTCTRKTLPGLRA
VQKYAVRVGGGSNHRYGLDDAVLIKDNHVVFAGGVTPALARARAAVGHMVKIELEVDTLAQLDEALAAGVDVVLLDNMDH
DTLREAVRRVDGRAITEASGRITPQTAPAVAATGVDLMAVGWLTHSARVLDIGLDS
>AHV92346.1 flagellar biosynthetic protein FliO [Bordetella holmesii ATCC 51541]
MNEASLVRVVVGLLLVVAAILVAGWLARRAGVGSRAQGTLLWQIASQTLGPRQSVIIVEVDKTWLVLGVTPGQITTLHTL
PAGELPVADATSFALKLGQALTRR
>AHV92347.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MRRSKIRLLYLIVALAMLSSAVAFATALGLAYAVQREHLMAQALSANQAYAAKFAEAIDIYVGSVQRQLRSSARRLPALM
QQPDALQAEASRLAELADGESVAAIADKDDKVIAYATLTPDAASNPGTLAGLEIGDRQSRDNVSAVYLTAAEKMAVALTE
PIRGPAGEYLGLVGLSTLVHKDNQLSRLVGNHSRADGFYAYVVDGTGTIIAHQDPRRVGSSERHNEAVESLLRKERGARA
IVNTRGELYLAGYAPVATADWGVVVQSPQTIITTPQRTLLARAALYSLPIALIIFFAVCALAYGIARPLGKLANILRSTD
LAHPQPASHISSNWYFEAQQLGEAVDITLAEYRQRLSSLDAETLADPMTGLLNRRGLAREMGRLQANRQPFAALALDLDH
FKRVNDTFGHAAGDEVLKALANLTRTTIRQQDCAFRVGGEEYLVLMPGADMPRAQALAERLRAAVQATHMPGGVGHVTVS
IGVALWQAHGDAQVVLAHADQALYEAKRKGRNRVTAHTGGKAF
>AHV92348.1 cytochrome C assembly family protein [Bordetella holmesii ATCC 51541]
MSSGIVFHAVAALVYAVLGASMWRRLQKAGSVEQTGKIARFCLLGALVVHGYALREAILGTDHIFIGWALALSAAMWLGL
IMYWLESFFIRIDGVQLLLLPAATLATLLAALFPQGVAVPHVGTPWLRIHLIIALAAYGLITIAALHAMLMALLDRHLHR
PLDAPASRSIIGRVLDAQPPLLVQEQLLFRIIFIGFLVLSAAVATGSVASILLTGRILPFDHKTIFTLLSWLTFGGLLVG
RQVRGWRGRVALRWTVAGFCFLILAYTGSRFVLEMILHRS
>AHV92349.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MRGASFEIPAGTITALVGVNGSGKSTLFKAIMGLQRLACGQIEVLGMPARTALRRKLVAYVPQSEDVDWDFPVLVEDVVM
MGRYGHMGPLRRPGRKDHLAVTSALERVGMHTLRTRQIGELSGGQKKRVFLARALAQDARVILLDEPFTGVDVTTEDAII
ALLSRLRDEGRIMLVSTHNLGSVPEFCDRAVLLNRTVLAYGPVADVFTQANLQATFGGVLRRFVLSNTDERRALAVDIVT
DDERPLVFYGDTATPREPRPGDRP
>AHV92350.1 UDP-D-quinovosamine 4-dehydrogenase [Bordetella holmesii ATCC 51541]
MILPYPVRRLFVDLPRAVKQLLAIVLDAVILLFAFHCALWLRFELFFVTQQYFFLSLLACAGGLAALGAFGVYFYILRYM
SERVVAAILGGILVSVMVVTAGNTFLQLSTLSRGVLVIYAALALVGLIGIRLFARKLLFPADHHMADPRIPVLIYGAGGA
GSQLAAALRAGPYYRPVAMLDDDRRKHRLVVSGLRVYPPEQLSRLIDRHNVRQLLIAIPSATPPQIRAIVEAAEPYRLRI
RLVPSMRELIDPANGVRLRDVQVEDLLGRDPVAPITSLLGQCVTDRSVMVTGAGGSIGAELCRQILALRPSKLVLLEISE
PALYTIEQDLRLRYPSIDIIGVLGSVRDPNHCLAQLRRHNVQTIYHAAAYKHVPIVEQNVEEGIRTNAYGTLSIAQTAIQ
AGVQDFVLISTDKAVRPTNVMGASKRLAELVLQAHAQVQDQTRFSMVRFGNVLGSSGSVVPLFRRQILDGGPITLTHPEI
TRYFMTIPEAAQLVLQAGAMGESGSVFVLDMSEPVRIRDLAERMIRIYGLTVKNTDQPDGDIEIRITGLRPGEKLYEELL
IGDNSQPTLHPRIMRATEYNIPYETLMSQLSLLDSTLQAGDVHSIVTLLRQIVREYTPVENGCVGVHPRSSPQGYSEASS
SASRR
>AHV92351.1 RND transporter, hydrophobe/amphiphile efflux-1 family protein [Bordetella holmesii ATCC 51541]
MPQFFIDRPIFAWVVALFILMAGILAIPNMPVSQYPDVAPPSISITATYPGASAQEVAETVTSIIEDELNGAKGLLYYES
VSDSNGQSQITATFRPGTDPDLAQVDVQNRISNVTAQLPSAVTQQGLQYEQTSAGFLLFVTLSSTDGSLDQAALADYITR
NIKNPISRVPGVGQFQLFAAPRAMRIWVDPQKLVGFNMSMQEVNQAIAAQNVLISGGSIGAPPNPKDVRVTATVTANGQL
STVEGFGKIVLRANTDGSRVMLRDVARIEVGSDNYQFGARLNGQPTAAFAIVLSPDANALETAEGVRKQMATLSQYFPDN
IKYEIPYDTAPYVKVSIEKVIHTLIEAMVLVFLVMFLFLQNVRYTLIPALVVPVAMMGAFAVMLALGLSINVLTMFAMVL
AIGILVDDAIVVVENVERIMATEGLPPKEATAKAMPQITGAIVGITLVLVAVFLPLAFMGGSVGVIYRQFAVAMAVSIFF
SAFLALSFTPALCSTLLKPIPKGHLNEKKGFFGWFNRKFEATTHHYQDWISRVLHKGGRMMLVFGLLVVVLGWLYLRLPS
AFLPEEDQGYVISNIELPAGASANRTIEVIEQVEHYFKGLPTTQNIVAVQGFSFNGNGLNAALVFTTLKDFADRKSAQDS
AQAIAGGAFQHLFMGIKDAMVFTVVPPAISSLGNAAGFDFRLQDRSASGSEALAAATGQLMGLAMQSPVLSQVRITGLGP
GAQLSLNIDRDKAAALGVDFSEASTLISTAIGSAYLSKFPNLGRMQNIWVQADQNYRMHMDQVLALNARNKDGGMVPLSA
FVTAKWSQGPTQVVRYNSYEAVRIGGDAAPGYSTGEAMAEMERLVGQLPAGFGYEWNGLSYQERLAGNQAVILMGLALLV
VFMVLAALYESWAIPLSVMLVVPLGMLGAVGLVSLMGMSNDVYFQVGMVTVIGLAAKNAILIIEFAKDQYARGNGLYASA
VEAARLRFRPILMTSLAFILGVVPLALATGASAASQRAVGIGVLGGMLAATPFAVIFVPTFFVVVMKLVKTRPRLLGAEL
RAFQAEQVAKKEQDGKLPGDTSNQGGQENKE
>AHV92352.1 putative secreted protein [Bordetella holmesii ATCC 51541]
MQMNTKGIPMKPHFLRALLAACALAFSSQAPAQDKDWPQHPVKIVVPFQAGSATDLISRQLGAALSAELGQPFVIEARPA
RPQPLAAPPWPAPSPTATPC
>AHV92353.1 alanine racemase [Bordetella holmesii ATCC 51541]
MPPSIWAVIKANAYGHGIERAVGAFSQAQGLAMLDLDEAVRCREAGWGGPIMLLEGFFDVSDLDWLDRYHLSTAIHCQEQ
LDMLTHIRPLRRINAMVKLNSGMNRLGFAPQNYGQAYEAARQLQARGVLGSVGKMTHFATADSAQGPYWQWEVFQAATQG
LPGPVSVCNSAGTLRYPQLAVGHAGSDTHWVRPGICLYGASPFDDENAAALGLLPAMTLTSEIIGVQQLRAGQTVGYGAS
FTAPEPMRIGVVACGYADGYPRHCGTGTPITVAGVATRVLGRVSMDMLAVDLGPVAAAQVGSPVVLWGEGGPSVDEVATS
GGTIGYELLTALAQRVPVTEIS
>AHV92354.1 aspartyl/Asparaginyl beta-hydroxylase family protein [Bordetella holmesii ATCC 51541]
MQPDTATRQSLFSRVLFRFIDWLHGRIARASKVGDPPIFDNRLFAWVPAFEAQTPVIRAELEQLLADREKLPAFHEISPD
VGMITRDDQWKTFVFMGYGMRSERNLARCPGTARALQGIPGIRTAFFSILEPGKRIPLHKGPYNGVLRLHLGLRVPQPRE
RCWIEVDGQRYSWREGEAVIFDDLYPHQVHNDTDGLRAVLFVDFERPCHAPVSWLNRLVLAVAPMSDEIRRGKANHDAWE
KTYYDQRNGR
>AHV92355.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV92356.1 flavin reductase like domain protein [Bordetella holmesii ATCC 51541]
MTVVSTTGLAGERIGMTVSSFNSVSLNPPLVLWSLSRTSSSLPAFLQCQHYVVNVLSAEQIALARHFATGTTSERFNGLP
EISAPHGTPRLDDRNAAWFECRNRSQYEEGDHVIMVGEVLACGCSTEDPLVFHAGGFDLTPARQT
>AHV92357.1 hypothetical protein D560_1043 [Bordetella holmesii ATCC 51541]
MALLGGSLKRREMLSARLGDILSELYLLSALLKRWDDEGRCHADLPLVAWGMEEGCLRIEQAMDQVLSNLPRRAAPRRGR
RVARCHPAHATGARAERCAHTRVRQRVAGAFGHARPAQRRSAARGAKTPSPRWRRPLRG
>AHV92358.1 fumarylacetoacetase [Bordetella holmesii ATCC 51541]
MNETHDPAIKSWVASANTADTDFPIQNLPFASFRRRGSQQAYRPGVAIGQYIVDLDALRAAEPFDGAAAQALQACADTHL
NTLMDLGPAAWSALRLALSRALREGAALRTVIEPLLVAQADAEFTTPARIGDYTDFYISLHHATAIGKQFRPDNPLLPNY
KWVPIGYHGRASSIGVEQRFARPVGQQRPATEGDTPLFGPCKRLDYELELSIFVGQGNPQGERIPLDSAESHVFGLGILN
DWSARDIQAWEYQPLGPFLSKNFASTISPWVVTLEALAPFRTPWRRTEGEPQPLPYLASPSNRAEGAFDVQMEVLMTTEA
SRAQQAQPARLSSSNFRDAYWNVAQLIAHHTVNGCNLQAGDMLGTGTLSGPGASEAGSLLELSQGGKTPIELPWGETRTF
LEDGDQIIIRAECVKPGYPRIGFGQCIGTVTPARL
>AHV92359.1 tRNA 2-selenouridine synthase [Bordetella holmesii ATCC 51541]
MRQDCQTYRELFLADVPLLDVRAPIEFAKGAFPGAVNLPLMDDRQREMVGTCYKQHGQQAAIALGHRLVSGALKQARIQA
WLTFAQAHPDGYLYCFRGGLRSQIVQSWLSSEAGVAYPRVASGYKAMRGFLLATLQSALHECRVMVLGGMTGTGKTDVLR
TLAYALDLEHHACHRGSSFGKRVQPQPVQVGFDNALAIDVLRKRHLGHETFLVEDEGQAIGSCSLPPDLYRLMQVSPLVW
LEDSLTHRVERILRDYVIDLCADFVQRDGQEQGYIAFAQRLQDSLAAIRKRLGGLRYQQIAALMNAALTRQAASGDIQAH
RAWITALLTQYYDPMYSYQRKAKQDRIVFAGDERAVLDYLAHDRSRQR
>AHV92360.1 cyanophycin synthetase [Bordetella holmesii ATCC 51541]
MEDAEAAWEAAQDLNGPVVVKPRDGSQGRGVAVNIETRERVLAAFEAASQISSEVIVERYIPGHDFRLLVVGNSLVAASR
RDPPQVTGDGVHTIRELVAQVNTDPLRGDGHATALTKIRLDDIAQGVLNKQGYTPESTPPAGALVVLRNNANLSTGGSAT
DVTDEVHPELAARAVTAARMIGLDICGVDVVAETVHLPLEEQHGGVVEVNAAPGLRMHLNPSFGKGRAVGEAIIGQMFDE
GDDARIPVIAVAGTNGKTTTVRLSAHILTCAGNRVGMTNSDGVYVGKRRIDTGDCSGPRSARRILLHPDVDAAVFETARG
GILREGLAFDRCDVAIVTNIGMGDHLGLGYISTVEDLAVVKRVIVQYVRSKGMAVLNAADAHVAEMASACPGDVTYFAQD
RNHSLMSTHRAQGKRVVYREGDSIVAAEGSHEVLIPLADIPLTRNGTITFQVENAMACVGAAWALGLDWGTIRQALATFV
NDAQTAPGRFNVFDYGGATLIADYGHNPDAIQALVTAVDAMPAKRRSVVISGAGDRRDEDLRQQTEILGEHFDDVLLYED
QCQRGREDGEVIALLRQGLTQASRASHIEEIRGEFVAIDRALQRLAPGDLCLILVDQVEEALAHIAQRVAEKG
>AHV92361.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MLDADVSDACLARMHETGVRGLRVNLESTGASDAAAVSRALAIWAARLAGQGWHIQVYASLDAIAQAAPTLARLAVPVVL
DHFAMIPVQVPLQDARIQGVLRLVADGDAYIKLSASYRVAPDPDNDAQACRLAALARAIVACNPERALWASDWPHTNRQP
GLLPTEVSAYRDVPAARLRAELHAWLADAVTREQVLVRNPARLYGFQ
>AHV92362.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MGLEVFAFGNLMLGCAYVLQLLGHSSDGLVLSLVNHTLTLCAPVAYLLGAMRFFNRPTAVRKPLLILALLYTAAQLAVQT
AWGTEARHALLAGSCALLFLGMSLAALRGMRTYARDMPVEMAIFAALIAGICVLNAAKLVMILSAGLLDMGSRFQMVFYL
YMSFLGTVLPPATVWLVLRRLTDELQTLATRDPLTGLLNRRGLTDSLAAHFRSRHAAPVQLLMMDIDHFKQINDTYGHLV
GDSVLSHIGEVLTATAPKTNLICRMGGEEFIIICMQPEQSAMRLAEDIRLAIARLAIRTSNPQEYIRCTATIAVSRPFHE
ALALDHALQDADLALYRGKTSGRNRVETVRPDAATPADTIQTA
>AHV92363.1 hypothetical protein D560_3797 [Bordetella holmesii ATCC 51541]
MPAKSKAQQMAAGAALAAKRHEAPVGSLKGASRQMYDTMTQKQLEEFAHTKQRGKPRHT
>AHV92364.1 peptidase M23 family protein [Bordetella holmesii ATCC 51541]
MIWPAEGKLTRGYNGSSSNGLVIANVSGSPVKAAAAGTVAYASNGLRGYGNLVIVRHGSTFITIYAHNRKLLVKQGQSVK
QGQQIAEMGNSDASSNQLYFELRRDGKPVDPTGVLPTR
>AHV92365.1 shikimate dehydrogenase [Bordetella holmesii ATCC 51541]
MSLPQAGAPLRYAVIGNPISHSRSPQIHAMFAEQTRIVIDYARLAAPLDGFRETVKDFFLQGGRGLNVTVPFKQQAYALA
QENLSTRARLAGAVNTLTWRDGVVQGCNTDGVGLVDDLKRLGAALQGARLLLVGAGGAARGVLHPLAEAGCAEIRIVNRS
PARATELAAAWQAAGLNPATRVSAGGLPEAARPGGWDVVINATASSLLDEAPALPKGLYAGDALAYDMVYGTRPTAFMHQ
ATADGAARTADGLGMLVGQAAESFFIWHGLRPDPSAVLTALRAELLAEG
>AHV92366.1 oxidoreductase NAD-binding domain protein [Bordetella holmesii ATCC 51541]
MTDSKYTRQTVLDVHTWVPGKLLSLRLTRDSDFEFQPGQFARLGLPAHHAPDAEPTIWRAYSMVSSPGEDALEFYSIVVP
EGEFSPRMAALQPGDALYVEKKPFGFLTPDRFEPGGSLWLLASGTGLSAYLSMLRDPATWQRFDRIALVHGVRHAEELAY
RAEIENLHRRPDLAPYFAQTPGKFRYLPIATRAGLPGVPQERLTTLLADGRLETLLHEKLDPAAVKIMLCGNPAMLADAR
KLLSERGFAPGRRGMPGNLAVENYW
>AHV92367.1 isoaspartyl peptidase [Bordetella holmesii ATCC 51541]
MSRAAMSPEKEQEYLQALRAIVQAGQAVLAKGGCALDAVTEAVRLLEDCPLFNAGHGAVFTSAGTHELDASIMDGATLRS
GAIANVDCVRNPVLAARRVMENSKHVFFVGQGAADFAGAEGLELVDPSYFSTEARREQLQRVQRETPEAAVLDHDGQAMV
ARGQPAPADPLDSDRKFGTVGAVAVDAQGNLAAATSTGGITNKQVGRVGDAALIGAGCYANNRSCAVSTTGTGEMFIRMV
AAYDVSAQMEYLGATLQDAANRVVQEKLPTIGGKGGLIAVDGQGNVALPFNTEGMYRGYGRVGEDAVVAIYR
>AHV92368.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MIAMALACKPRVLLADEPTTALDVTIQAQILTLLSELKSAHGMAVVFITHNLGVVAQIADRVAVMYAGEVVETADVQTLF
ARPLHPYTEALLKAMPRVDSDAESLASIPGGVPAITAMPPGCAFAPRCPLRQQRCDAQPPALTGVAPGHEVRCLVRAEAA
QGQAA
>AHV92369.1 prkA AAA domain protein [Bordetella holmesii ATCC 51541]
MHSILEGFKSQYARDQETELSLEEYLTLAKQDPMAYASPAERMLAAIGEPELVDTRNDSRLSRLFSNRMIRRYPAFREFY
GMEDVIDQIVSFFKHAAQGLEERKQILYLLGPVGGGKSSIAERLKVLMEAHPIYALKGSPVNESPLGLFNPERFGDTLEQ
EYRIPRRYLSGIMSPWAVKRLK
>AHV92370.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Bordetella holmesii ATCC 51541]
MTITHNLGFPRIGAQRELKRAVEAYWAGKQTPEQLLATGRELRAAHWQRQAANGVSMVPVGDFAWYDHILEWTTLLGAVP
ARFAQLESEPVSLDTLFRMGRGRAPSGKPAAACEMTKWFDTNYHYIVPELVPGQTYRIAREYLFEQVKEAQALGHAVKPV
IPGPLTWLYLGKGDAFEAGAADDGKLTLLTNLLPAYQEVLKRLADLGVEWVQVDEPILVLDLPPAWLDAFRRTYATLADS
PVKLLLATYFDGLKDNLATAAALPVAGLHVDLVRAPEQLDDVVRALRTDQVLSAGVINGRNIWRTDLDETLEVLLPVARQ
LGDRLWLAPSCSLLHVPVDLAAETELDAELKSWLSFAAQKLEELDLLGRALSGDASQHVQAGLAAQRAALAARRASPRIH
NPAVGRRMAGEAQVSRDRAPFTQRIAQQQARLKLPAFPTTTIGSFPQTAEIRALRRDWKAGALSDSAYESSIRKEIEEVI
RFQEKVGLDVLVHGEPERNDMVEYFGELLAGFAFTKNGWVQSYGSRCVKPPIIFGDVARPAPMTVGWSSYAQSLTDKPVK
GMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEKAGVKVIQIDEPAIREGLPLRRADWQNYLGWAVDCFRLST
AGVADDTQIHTHMCYSEFNDIIEAIAAMDADVITIETSRSNMELLKAFEDFRYPNDIGPGVYDIHSPNVPDVDWMVGLME
KAAKSLPKERLWVNPDCGLKTRAWPETEAALVGMVQAARNLRQVA
>AHV92371.1 biopolymer transport ExbD/TolR family protein [Bordetella holmesii ATCC 51541]
MNFRRRGSQDELDINFIPLIDVLLVMLIFLAATTTFARYSQLQITLPQAQADVMQPPAMLEVAVSQDGHYALDGILLDSS
DPATMTQALRQATGGNPDAVVVINADAQAAHQSVVNVMQAAREAGIGRINFAAQTAR
>AHV92372.1 hypothetical protein D560_3707 [Bordetella holmesii ATCC 51541]
MSMQTLLLRIIGLALDESAARDLRGHMLAACPQARVDIHVAVDVESDFTYVYCSSASPQGLAAMRALVDERYPGAETRVL
DLLADLAGRSDGQASAWHYVVETDVLPEMETDFNAWYEQEHLPGLAGVPGTVQARRWRCHDGSPRYHAVYELVTRETFGS
EPWLAVRGSEWSSRLRPAFCNTRRTMFRKLAG
>AHV92373.1 outer membrane protein oprM [Bordetella holmesii ATCC 51541]
MIPTMKTLLSMSLAGALAGCSLAPTYQRPDAPVDTLYPSGPAYGVAAQQPAGQVAAADVGWREFFHDPLLQRIIALALAN
NRDMRVAALNVEAARAQYRIQRADLLPSLGVAGDTTVQRSPGDLTQTGRPEISRQYRVGGAISSWELDLFGRIQSLSEQA
LQTYLAQDETRIATQLALIAETAQAYLTLRADQELLQLTKDTLSSQENSYKLTKQSYDQGVGTALDLSQAEISLRTAQRN
QSQYLRQVAQDRNALTLLAGQPLPADVLAQLDESKSLPDDIVIADLPAGLPSDLLSRRPDVRAAEHVLRGANANIGAARA
AFFPSISLTGMAGTASASLGGLFKAGSGAWSFAPQISLPIFAGGSLMADLDLAHVRKRIEVANYEKAIQTGFREVADGLA
GRATLDDQIAAQRLLVDASQRAYTLSDQRFRQGVADYLSVLDSQRSLYTAQQALVDTRLSRLTNLITLYKSLGGGWTEHT
VSADAATTASSQ
>AHV92374.1 putative taurine ATP-binding component of a transportsystem [Bordetella holmesii ATCC 51541]
MSIARVLANNPDVMLFDEPFAALDAMTRQVLQDQLLKIYEESGKTIVFITHSIDEALTLSTRMAVMGSKPGRIVQDIDND
LPHPRSADVQLSEQFVQLKRAIWQRVQEEVTRSMELAD
>AHV92375.1 bacterial regulatory s, luxR family protein [Bordetella holmesii ATCC 51541]
MQKLLIIDDHPVIRYAVKGLMEKEGFEVVGETDNGLDGITMARELLPNLVILDIAIPKLDGLEVLTRLQALGLPMHVLIL
TGQQPALFARRCLNAGAAGFVSKHGNLQEVVDAAKAVVAGYTYFPKTTLTDIRGVENQDDAMMISSLSNRELALLQLLAQ
GLTNKDIADSMFLSNKTISTYKTRLLQKLNATTLVELIDMAKRNNLG
>AHV92376.1 scpA/B family protein [Bordetella holmesii ATCC 51541]
MIPGEDLQALVQPPVDSTPDTVDSVAFARLYGEPLFQLPTDLYIPPDALEIFLEAFEGPLDLLLYLIRKQNFNVLDIPMA
DVTRQYLSYVDQIRTHNLELAAEYLLMAAMLIEIKSRMLLPVKKSDTGEEPEDPRAELVRRLLEYEQMKLAAQRLDALPQ
LGRDFQRAQGVADISVERALPEVSLDDLRSAWADIIKRARLNQHHHITREQLSVRDHMTHILRRLNDVRFIEFTDLFLER
ITEGAPVAVVVVHFIAMLELARESLLDITQAEPYAPIYVRLAYTSATAAA
>AHV92377.1 serine hydrolase family protein [Bordetella holmesii ATCC 51541]
MRLQPIIIPGWKDSRPGHWQTLWADSLPYARRLRQQDWQNPQRAQWLAALCASVDEASSPVLLIAHSLGCLVAASLPIAL
RSRVAGALLVAPADVEQAGTPACLRDFAPIPQQPLPFQSVVVASDNDPYCSLSRARHFAQDWGSRFVVVPQAGHLNADSG
LGQWPQGLKLLGALRRRAAWRVSPPSPRISPVPPLANSSGAG
>AHV92378.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92379.1 putative opine oxidase subunit A [Bordetella holmesii ATCC 51541]
MAATDTGRLLGEEYRAGAALAERFRQCGAVYEPQTQVWQIESGWHVYMTRNGRAEVVRADRIVLAIGAQERPAPFPGWTL
PGVLTVGAAQILLKTSRQVPAAPVWVAGSGPLPLLYMAQLLRAGGKIAGWLDTTAPGPGAEPCLGPGQRWRPGAMSVRDW
ADCGS
>AHV92380.1 phosphocarrier, HPr family protein [Bordetella holmesii ATCC 51541]
MPTLDIVISNKLGLHARAAAKLTQLASKFNSEIFIARGAQRVNAKSIMGVMMLAAGLGVTVKIDASGADADQALAEIQSL
FDNKFGEQE
>AHV92381.1 putative zinc protease [Bordetella holmesii ATCC 51541]
MRLPLLSRRLNALLVSSFLAFQAGAASLPAGVSEVSSIEGITEYRLANGLRVLLAPDASKPTTTVNMTYLVGSRNENYGQ
TGMAHLLEHMLFKGTPAIRNALGEFSRRGLQANGSTSSDRTNYFASFAANPETLKWYLGWQADAMVNSLIAKEDLDSEMT
VVRNEMESGENNPFRVLMQKMQAAAYQWHNYGKSTIGARSDVENVDIAQLRAFYHEYYQPDNAVLIVAGKFDPQTALADI
QSSLGKLPKPKRTLPPEYTVEPVQDGERSVTLRRAGGTPLVAAMYHLPAAGSPDFVGLDLAATILADTPSSRLYHALVPT
KLASGVFGFTMDQLDPGLAMFGAQLQPGMDQDKALQTLTATLESLSSKPFSQEELERARSKWLTAWQQTYADPEKVGVAL
SEAIASGDWRLFFLQRDRVREAKLDDVQRAAVAYLVRSNRTEGRYIPTEKPQRAPLAQRADLAAVFKDYKGDPNFKAVEA
FDPSPANIDKRTLRRTLDLPNGQVELALLPKATRGDRVQAELLIQFGDAEALRGQRVPLAAAAALLDRGTDKLSRQAIQD
RLDQLQAEATINGSGTNLVVNISTLGKNLPDVMALVLDVVRNASFPQDQVEEYKRQAITMVQDAMTDPTALASRALARHN
NPWPADDVRYVPTFDEALEQLRSLSRDDLAAVSGKLYGAGRIKFSAVGEFDPAAVEAVLRKGLDGWRSAPAYTRLPDPYR
AVPAQQFDIATPDKANAFYISRMPLQLQDTNADYPALYLANFLLGTSETSRLWHRVRETEGLSYNVRSNLSVSSYEPSAN
WTIYAIYAPQNRARLEKAISEELARALKDGFTDQEVRDGVVALLNYRNLARAQDDVLADTWVNYMQTGRSFQWSADMDRK
LEALTPDQVNAALRKYLKPEVFSTAVAGDFTKKSTP
>AHV92382.1 dGTPase family protein [Bordetella holmesii ATCC 51541]
MSELASYASDPALTRGRQHHEPAAQNRSEFQRDRDRIIHCNAFRRLEYKTQVFVNHEGDLFRTRLTHSLEVAQIARTLAR
SLRVSEDLTEAISLAHDLGHTPFGHAGQDELNACMRELAPQAGGFEHNLQSLRVVDELEERYADFNGLNLCFETREGILK
HCSVAHARQLGAVGQRFLTRTQPSLEAQLANLADEIAYNNHDIDDGLRSGLLTLEQMGEVDFFARHYAQVRDRYPGLAPR
RATAETIRRMINTLIMDLTATSLARIRDVAPATADDVRAAAPLAGFSDPLRREADALKKFLFDNLYRHYKVVRMTSKARR
IVRELFEAFLGDPRLLPPDYRRENEREQARTIADYIAGMTDRYAISEHRRIFDMS
>AHV92383.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV92384.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKLPQLMATLCLAATAIGQPAAAYPDKPITLVVPFPAGSGTDAVGRIFAMELGNRLGQQIVVENKPGANATIAANYVARA
KPDGCTLFVTTNTSHSAAPFLMKQVPYDPVKDFTAIARGGNLPFILVANPKRPYKTVQELIDYAHKNPGKVTYASGNSTG
IVAGATLARRAGIDLLHVPYKGTPQAMTDVVGGQVDFMFTDLASGLPFVQSGQLRPLAVSTAEHSAIVPQLPSMKEAGVA
DFDLNSWNGYFGPAGLPAEVVQRLNSAINEIVRDPAVKQKLAGLGFDAFSGTPQDFSAFVSTQRDLWGQLIRDAGIDAQ
>AHV92385.1 2Fe-2S iron-sulfur cluster binding domain protein [Bordetella holmesii ATCC 51541]
MFRKLHESGAASLTLTIDGEPVTAEAGESVAAVLLRQTTPASRSTPVNESPRAPYCMMGVCFECLAIIDGVASTQSCMVP
VREGMRVERQHGKRSVQA
>AHV92386.1 NUDIX domain protein [Bordetella holmesii ATCC 51541]
MVVGTVPVWEGRILLCRRAVEPRYNTGTLPAGFMELGESTAQGAGRETLEESGARIRLGQLYTIIDVPQIEQVHIFYLAD
LLGPELDPGPESLEARFFEESDIPWDDLAFRTVATTLERYLQDRRTGTFPTHHYTLESHRSS
>AHV92387.1 rod shape-determining protein MreD [Bordetella holmesii ATCC 51541]
MAARNNGTHRAPRTLGTPSNVQPERLAHPANAAFVWGTLLLVWLLSLLPWRQWPASPDILALVIAFWSAYEPRRVGMFTA
FTFGLLLDVHDASLLGAHALSYTLIAYGALALSRRLQRFDLWSQAMHMLPIFFVPQLLTQIIMAWLAGRWAGWDWAVGVL
LTTALWPIFGWGLQLPQRRYDDGEPSAN
>AHV92388.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MCGLMSVNGERDGPPTRVGLPVVDMVTGLNATSAILLALYERERSGLGQFLDITLYDCAISLLHPHAANYFYGGKVPQRS
GNAHPNIAPYETFTTAAGEIFLAVGNNRQFAGLCEILDAPDLAADARFADNAARLTNRPALREALSARLIDHRATELAER
LLKHGVPAAAVQDVAEVLDHPHTHHRGMVLENEAYRGLASPIKLSRTPASLRRAPPAKGEANAELGVPPEAS
>AHV92389.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHN
>AHV92390.1 yjeF-related family protein [Bordetella holmesii ATCC 51541]
MRVYTLEQLRRIEAGARDLGMDLMGRAGRAAADFVRVRLSAPGPVLAVVGPGNNGGDALVAATALLGAGYAVQVVMPGDP
ARLPRDAARAHAAWRAAGGREDQALPRAAPALAIDGLFGIGLTRRLGQPWQDLVDAVNRWRIPVLALDVPSGLSAQTGQA
LGRPVQARWTLSFIGTPSALAQGAAAMGQHYEEDLGLPPQWLSALLTD
>AHV92391.1 N-terminal domain of DJ-1_PfpI family protein [Bordetella holmesii ATCC 51541]
MVLTSHERLGDTDRKTGFWLEEFTAPFYVFKDAGAHITLASPRGGQPPLDPQSQASQAQTESTRRFDKDIPAQAQLAATE
RLADIRAADVDALFYPGGHGPLWDLAENRHSLDLIEALLAAGKPVGAVCHAPGVLRHAKTCGGEPLVAARRVTGFSNAEE
AAMKLTHVVPFLVEDELKRLGADYSAGPQPFAQYVVRDGLLITGQNPASSAGAAQALLAALARD
>AHV92392.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MGPAGGAACLFTVSAALVCLVRGLPRLARFHPVYLYGCAALFAAYEICLALAIGSAHTRAEALELGMINYLWPSLTIVVA
VLAGQARGTWVLWPGAALSFLGIVWITGAGQALSFDRIHDNVAGNPVAYALAFAAAGLWAAYSVLTRIYGRGDNGVALFL
LITALVLWLKHGLSTEMGVYEALVANPAAGVQVLVLGALVATGYSCWNLGIQKGNLAFWAAASYFTPVLSALLAAAWLHQ
DPGAAFWQGVAMVTAGSLLCWHATRARG
>AHV92393.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MRFENFSYTHPGATAPVIRGLTLDIQAGSFVAIVGGSGVGKSTLLRAAAGLTEPGGGSVRFEARPKPGCRARAVVFQDSR
LLPWRRVGANVAYGLEGLGLSGEEKRRRARQALALTGMEGLDDRWPHQLSGGQAQRVGIARAIARCRTLPRTWRKSPISS
NMPDLLRVLIHAPTADALRRARNNAANLLKADPHAAVEIVVNAAGVAAALADPHATDARLRVCANTLLATGTQAPPNLTI
VPAAILYLAQKQAEGWAYIRA
>AHV92394.1 penicillin-binding protein 2 [Bordetella holmesii ATCC 51541]
MFEFKKTSQQQKQRFRLRAWVGGLFALACFGALAGRFWLLQVDRYEGLSERADRNRIAVQPIAPRRGEVLDRNGVVLARN
YRTYTLEVVPARAGSIDDLFARLTPVVYVSLTDQRRFKRRVAESSRYANLVLRNNLNETEAAWFSAHAFEFPGVELRARW
VREYPQGEVAAHVVGYIGRIAENDLDALEKSGQTGNYRGTDVIGKKGIEKTWEQALHGRTGLEEVEVTAGGRPVRTLRRI
DPIPGSDIMLSIDLELQRIAEKAFEGRRGALVALDPDTGEVLAFVSQPSFDPNLFVDGIDVENWRRLNESPDHPLINRPL
SGTYPIGSTYKPFVGLAALELGKRRATDRMPDPGYFEFGGQKFRNAAGAVFGMTDMHKALVVSSDTYFYSLGPEIGVNAL
HDFSKQFGFGQITGIDLEGERTGVLPSTDWKRRAYKDRERQRWYAGETISVAVGQGYNAFTLLQLAQATSTLANNGLYRR
PHLVHAVRDARSGELAATPSTPDYRIPLKQTNLDVIKGAMTDVIRSGTARRAFAGAPYQAAGKTGTAQVFSLRGGQYRAA
ALDERLRDHALFMGFAPADHPRIAVALIVENAGWGASAAAPVAREVFDYWLGPKRQDKIERAPAPASEPESAK
>AHV92395.1 septum formation initiator family protein [Bordetella holmesii ATCC 51541]
MRLLFLVLLVLVGLIQYPLWLGKGGWFKVWDYQRDVTAQREVNEGLSARNAALEAEVRDLDSGTGALEERARGDLGMMRE
GEVFVHVLPPGSPLPSANSVPQATAPKPPARPAAGASSTQQRR
>AHV92396.1 catalytic LigB subunit of aromatic ring-opening dioxygenase family protein [Bordetella holmesii ATCC 51541]
MTWPVLFVSHGSPMLAVEPGRTGAVLQQWSAAQPDKPRGILVVSPHWMGHGLAVSTRDRQIAWHDFGGFPPELYQLQYSP
QGSPSLAARVRDVLAASSIEAADDVRRPLDHGAWVPLRYLYPQADVPVVQLALDVGRDARGQYDLGQALAPLREEGILII
GSGSLTHNLRDVRMPQSAPPSAYVPGFQQWYADRLAAGDLPALFDWQRLAPGAGQAHPHDDHLMPLYVALGAGGLPARRL
NDEVSYAALAMDAYQFGLDA
>AHV92397.1 D-galactarate dehydratase/altronate hydrolase family protein [Bordetella holmesii ATCC 51541]
MGLGEALEGGLYRSRSQAPAGYKIASRDIRAGEPIRKYNVIIGFAAQDIPQGTMVHSHNVEFREFDRDYAHARDYKPTDF
VAEENRATFEGIVRANGDVGTRNYIGLLSTVNCSATVIRKAAEWFTPERLAGYPNVDGVVAFSHAIGCGMEMTGEPMALL
RRTITGYARHPNLAAVLIVGLGCERNQISGLMEQESLTSGSRLKTFVMQETGGTRKTIEACIAEI
>AHV92398.1 hypothetical protein D560_3156 [Bordetella holmesii ATCC 51541]
MDIQEQIAVIVHTVSHQGGRIDALNATLAATLHLVKESPGLKEAIEAQLEKNYSTLLARSENPQYMAGFESVRDMVQAAL
K
>AHV92399.1 putative iron binding protein [Bordetella holmesii ATCC 51541]
MPIQRPALTSLLRTLALAGAAAFATQAGAAEEVSLYTTREPKLIQPLLDAFTKDSGIKVNTVFVKDGLLERVKAEGQKSP
ADVLMTVDIGNLIDLVDGGVTQPVKSATLDDVIPANLRAADGKWYALSLRDRVLYAEKDLKLDSFHYEDLADPKYKGKVC
IRSGQHPYNTALVAAMIAHDGAEATEKWLRGVKANLARKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPGTDARK
WGDAIKVIRPTFADKKTSGTHVNVSGAAVAAHAPHKANAVKLLEFLVSEPAQTLYAQANYEYPVRKGVKLDPVVASFGPL
TVDALPVAEIAKYRKQASELVDKVGFDN
>AHV92400.1 beta-lactamase family protein [Bordetella holmesii ATCC 51541]
MCSTFKVLAVGAVLARVARGEDDLSRPMRLSAADIVAHSPVTQQRLNEGMTLGQLCDAALVVGDNTAANLLLSTIGGPPG
VTAYARSLGDAVTRLDRLETALNDATPGDDRDTTSPVAMAENLRQLVLGDALPGPERERVRDGLLHCQTGKGRLRAGLPA
AWTFGHRTGAGGHGTCNDIGIAWPPSAGPVVISAYLTESPLPLPERERVLAEAGRIVVHGLTSARLQAG
>AHV92401.1 ribosomal protein L7/L12 [Bordetella holmesii ATCC 51541]
MALSKAEILDAIAGMTVLELSELIKEMEEKFGVSAAAAAVAVAAPAAGGAAAAAEEQTEFTVVLLEAGANKVSVIKAVRE
LTGLGLKEAKDLVDGAPKPVKEALPKADAEAAKKKLEEAGAKVEVK
>AHV92402.1 acetyltransferase domain protein [Bordetella holmesii ATCC 51541]
MALLNSFDQPVGETLPGWTARPRPPRTPLEGRFCRLEPLDAERHAADLFAAYSAAPDGRDWTYLAVGPFVTQQAYRTYCE
QAAQSDDPMHFAVIDRASGRAVGTLAFMRIDVANGVIEVGSVTFSGALRRTPISTEAQFLFMRRAFDELGYRRYEWKCDS
LNAPSRQTAARLGFQFEGIFRQAVVYKGRTRDTAWFSITDAQWPARRAAFEQWLAPENFDAQGRQRARLQDLRVEAG
>AHV92403.1 amino-acid N-acetyltransferase [Bordetella holmesii ATCC 51541]
MPDLEADTVSALEAPEFAPAQFVRWFRDVAPYVHAFRGKTFVVAFGGELVQAGALNTLVQDLSLLSALGIRLVLVHGSRP
QVNEQLRLKGYSQQFGRGMEPTDAAALECAKEAAGEIRLDIEAAFSQGLPNTPMSNAHVRVISGNFVTARPAGVLDGVDY
KHTGHVRKIDVDALKFAIERGSMVLLSPLGFSPTGEAFNLAMEDLATSVAVGLRAEKLIFLSSSPGVLNEDGTVDTELAR
ADADALLAAGQLDEDTAFFLRPASLAVKRGVARAHVVPYCLDGSVLLEIFTHDGVGTMVVEDTLDDLRAATLDDVGAILS
LIEPLEADGTLVPRPRGVIERDVEHFTVLEHDGIIYGCAAIYPYPKDNMAEMACLIVHPEWQSSGEGEILLRHMESRARS
MGMKRLFVLTTRTSHWFIKRGFVQGGIADLPVDKQQHYNRSRNSLIFIKKL
>AHV92404.1 imelysin family protein [Bordetella holmesii ATCC 51541]
MRKLLQGMLLVAAVVAGGAQAAIEPKAVVKTYADIAAAGYQDSLTTAQALQKAIDALIANPSEATLAAARQAWIEARVPY
QQTEAFRFGNPIVDDWEGSVNAWPLDEGLIDYVDASYGTESDENAFYAVNVIGNAQISVGGKTIDASKITPELLSEVLHE
ADGNEANVATGYHAIEFLLWGQDLNGSGPAPKDRAGTPQQRHAGNRPHTDFDPKHCTGGNCERRIEFLKAVTQLLVDDLK
DMSEQWKADGAARKAVAEDPKAGLVAMLTGLGSLSYGELAGERMKLGLMLHDPEEEHDCFSDNTHNSHYYNQLGIRNVYL
GSYQRPDGSKVQGESLSDLVKAKDAKLDAEVRTKLDATVAAMQAMRDRAEKVETYDQMIAEGNKKGNAVVQAAIDRLIDQ
TRSLERVIALLELGDVAIEGSDSLDKPDAVFK
>AHV92405.1 aldo/keto reductase family protein [Bordetella holmesii ATCC 51541]
MQTRPLGRSGLAVPPIVFGGNVFGWTVDEAGTFSLLDTMVDAGLNFIDTADVYSRWASGNQGGESETLIGNWLKKTGKRD
KIVLATKVGMEMGPDRKGLAAAYIRQAVEDSLARLQTDHIDLYQAHSDDPDTPLADTLEAFADLIQAGKIRVIGASNYSC
TRLAEALITSERLGLPRFESVQPEYNLYTRQPFESGLQALVQAQQVGVINYYALASGFLTGKYRQPSDAAKSVRGAKIVE
SYLDERGRRILQALDEVADQTGATLAEVALAWQIAQPGITAPIASATTLEQLSELIGAARLQLSPEQRDRLSQASAWQ
>AHV92406.1 luciferase-like monooxygenase family protein [Bordetella holmesii ATCC 51541]
MEFGVFILAQQRGYHQSSKQVINNSIEQTVVAEQAGFDTAWYAEHHFNNYSLSPSPLMTVAHAAAKTQRIRLGTAVCILP
LYHPARFLAEVGFVDTVSNGRLELGVGSGYQEFEFERFGVQIAESGAIFNEFLDVIPKGLTQKIFEHQGQYLNIPPSSIA
VRCLQDPMPPIWITSGNPVTLGRGVRESHNLFVTALLNGNEAIAGLRGRLEKVASDNGKDLDRDVKFGFLRCGYASDNNA
EIDAYLDCARFQRRISESLKYRRAQSDDGYMVKEVPSETDPTFEQLRKNLPVGSVNEVIDKMLEEISILRPKHIALQTQL
GDFDQKTMLRQIELWGDKIIPAIRKEIGSTAALA
>AHV92407.1 ABC transporter, substrate-binding, aliphatic sulfonates family protein [Bordetella holmesii ATCC 51541]
MLKRATALAAASTMGFPMIARAAKTRLTYGGSGWLGHYSAYIALKTGLFDKQGLDIVWQSFATSSDRMGAVMAGNIDLAG
TGVVSSLALMAAGARQFQVIATPNNFGRAEGVLVREDVNDVAGLKGKKIGVTYASSAHVLLLDVLQQAGLNPDKDVTIIN
LPATNLLAAFQGKQIEAAVVAWTPAFDRIKAIPGTRVLLDDTAFSLYKQYGITPGPDVLLTRASIGKENPEAVHKFLTAV
FQANTMMTESPAEAAKVLLELTGLSQQEQEAVITQTTWYTEKEQHALMVDPGNFVNGMQQLAGMLVSLKQIDKAPTVKDW
VQTKYL
>AHV92408.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MLNPGVRRREVWAWAMYDFANSGYTTVILTTVFSTYFVAVVGQRAHWATLAWTAALSLSYLAIMLTMPTLGARADAHAGK
RWLLYTSTIGCVLATLLLTRVGPGDVWLALVAVAISNYCYCIGESVVAAFLPELARPAALGRVSGWGWSFGYCGGMLTLG
LCLAVVTRGEAIGQSAENYVPWVIAVTCLVFALAALPSFFLLRERARPHAVTLAAPDMLRRLARAWHETGEHFPEFRRLL
MCGACYQAGIAVVITLAAIYAEQVMGFSMPQIMLLVFTVNIAAAIGAFSFGYVQDRIGHKRALALTLVGWIIMVLVAYAA
TTVPVFWVAATLAGLCMGTSQSAGRAMTGAMAPAGRLAEFFALWTFAVQLAAVVGPLTYGLVTWLTAGNHRLAILVTGLF
FVAGLLLLARVDLVRGIARSQQV
>AHV92409.1 gamma-glutamyltranspeptidase family protein [Bordetella holmesii ATCC 51541]
MPGTGISLHNRGLNFVLTPGHANQVGPRKQPMHTIIPAFVTRGGQPVMSFGVMGGSMQAQGHLQMMTRLAAFGQNPQAMS
DAPRFRVENGPVVNVEAHLPADVVQTLRARGHHVQVAPADSLEFGSAQLIHCLPGGGYVAASDSRRDGQAVGF
>AHV92410.1 hypothetical protein D560_3369 [Bordetella holmesii ATCC 51541]
MRRWWWLAATILLTGWSLAGCVTPAATPSSARVPRSEPMSADQLAQTDFNRTVTLAARDNFNSLYALLDKLYRRNPREWR
KSGLADQAAAVAYVKRLIEERRAPSGLAGLRDVQVLAVSLDPNYHGDRVAAFIYGLADTILAAHNDKTRFYVSDILDGQR
IYNAARNVEAAAWLLSSRRNARGEPLLLANEMSSTVTNLSFEREFGAIIGRLDLIANLLGENTRRVGINYAQGLMFFNFL
PVR
>AHV92411.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MSAATPWRHWRLERESDGLAWLVLDRADSSVNALSADVMAEFAHVLDHLDSAPPKGLIIRSAKPGGFVVGADIEEFAHLA
TPEDARALVERGWNLFARLARVHYPTLALIHGQCLGGGLELALACRYRVVADAPSTALALPEVMLGIFPGWGGMLRLPAL
IGAPAALDMMLTGRRVDARRAAALGLADARVPERLLRQAARQMVLSAKPARRARALAALTNRWPLRGIIAARARKTIAQK
DPQGHYPAPAAIVEIWERHHGNALRAAHLLARIIQSPTARNLLRVFRLQERLKANARGQSAIDHVHVIGAGVMGADIAAW
CAYKGLTVTLQDMSMERIAAAIKRAGTLFSRRLKDRRQARAAFDRLIPDPQGNGVSRADLVIEAISEQVQAKQALYRQIE
PRLKPGALLATNTSSLSLATLLEGLLDPQRLVGVHFFNPVAKMPLVEVIGAAGNEAAQSRACAFVGQLGKLPLPVRDAPG
FLVNAVLAPYMLEAMRCLDEGMTPETVDAAMTRFGMPMGPLELADTVGLDIVLAAGSQLAGPQAPPRCLAERIARGDLGR
KTGQGFYRWQNDQPQRGTPGQAQPGLAQRLITPLIDRTQVLVDTGVVADADLADAGVIFGTGFAPFTGGPLHYRQSQTGA
PSRPVSSQQHTE
>AHV92412.1 NOL1/NOP2/sun family protein [Bordetella holmesii ATCC 51541]
MLGEVLQWTSPADAVLSHWLRANPALGGRDRAELAEGVYDVVRNLRHYRQLAESGVGNATRRLAILGLAATRGVEWLKDA
LDPGEADWVARVDQVDPSALPRAVRYSLPDWLEERLGKLPQPESLMQSLQQPAQLDVRSNPLKIERDALLAKLREGPAGR
YDPQPMRYSPWGIRFKGHPPINRWPEFESGQVEVQDEGSQLLALLVGPRRSEMIIDFCAGAGGKALLLGALMRSTGRLYA
FDVSAARLAKAKPRFARSGLSNVVPVAIDSENDSRVKRLAGKAQRVLVDAPCTGIGTLRRNPDLKWRQQPQSLGELCELQ
YRILKSAARCVAPGGRLVYATCSLLPEENGDQADRFLAEHPDFERLDAAALLHNRCDNLELEGPYVQLRPDLHGTDGFFA
AVFERKKAVRHTAEAKQEAVEPAATEHVPPPTRFRLSKRSRIKGSRQDHDVRASGFGGAVACLITHGPGDGITARFVGLV
DDLGYWRGDITTPAAATRIALAANDGGRPQCGRLRQLQARSGQRQATS
>AHV92413.1 fumarylacetoacetate (FAA) hydrolase family protein [Bordetella holmesii ATCC 51541]
MTETIQFYPGAPAAARLLRQARHKPGERLPETCRPATQGQALSVQQAQAALRLVEGDPIAGWKCGLPQDGKLKLAPIYVS
GLRQAGAISLGQDTVRIEPEIAFELTADLPPRARPYSEHEIDDAVGNARLALEILGSRYLRPEALPHAELLADHLYNNGL
VLGPAIDQPAPQSLSLTLQIEGQPACELAGRHPDGAPRAGLYWLVNFLSENGLGLVAGQHIITGSYAGYLDIPAQGKISL
TYGQLGQLHLELTPCPPG
>AHV92414.1 prokaryotic glutathione synthetase, ATP-grasp domain protein [Bordetella holmesii ATCC 51541]
MIVKPLDGMGGTGIFRLQPNEANRNAILETLTDNGTRTIMAQRYIPEIVKGDKRILIIGGEAVPYSLARIPLAGETRGNL
AAGGRGVAQPLSGRDLELARVVAARTAGRGLLLIGLDVIGDYVTEINVTSPTCFVEITEQTGFDVADMFAQALERAAA
>AHV92415.1 hypothetical protein D560_2840 [Bordetella holmesii ATCC 51541]
MRGLAMIWTMAGPAQAAGPLDAAREMVARQDLGVALLPMGMAAALRTQTYAGLVQHLGADKAHMLLEEELKRAAPTYRVQ
WEETSPRPIASSSRQPNCTR
>AHV92416.1 PPIC-type PPIASE domain protein [Bordetella holmesii ATCC 51541]
MAQASARHILVSTEAKAQELKTAIENGADFADVARENSSCPSARQGGELGTFGPGEMVREFDEVVFSAPVNQVQGPVKTQ
FGYHLVEVTSRRD
>AHV92417.1 lipo, YaeC family protein [Bordetella holmesii ATCC 51541]
MLLSALALGAAQAHAEKLTIAATQVPHAEILEVVKPVLAKEGVELDIKVFSDYVQPNLQVADKQLDANFFQHKPYLDTFN
KDRKTHLVPVALVHVEPFGAYSKKIKTLDALKSGASVAIPNDPSNSGRALLLLQKQGLIKLKDPSNIVATPIDVVENPKK
LKFRELEAAMLPLSLDDVDLALINTNYALEAGLVPTKDALVIEGSDSPYANIVVTREDNKDSPAVKKLVQALHSDAVRTF
IVEKYKGAVVPAF
>AHV92418.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MRKIPNFVLLRAFEAAARLQSFTLAAQELHLTPSAISHQVRELEELFGKPLFWRSHRQVEPTPEGRRLLESLTRILNALE
ACCAEVELAPAGQVRAVYCAPSLAVKWLGPRLPGFMTKNPDITIRLSSGSEPMDLTQAREVDVAISYGLALRLSGVDVTA
LGKEDIIPMCAPALKTRRHTWKQIMESAPLIDSALSQVRWNDWFVLNGLSLPSRPRTSFDRGTLSISAAVDGMGVALETT
RFAERELARGELVEAGKFAFARITRENHFFSQRSTERRVDKIRRFKDWLLEEIQASDYAGRAAGSGAR
>AHV92419.1 hypothetical protein D560_2902 [Bordetella holmesii ATCC 51541]
MTLLAKLSLAAALTLPLAAQAHDMWLLPSSTVLSGANSWVTIDGAVSNDKFYANHAPLRLDNLVILAPDGSQIQAENEHR
GKLRSTFDLQLAQTGTYRLAVVNDGVFARWKEDGKPKRYFGKADSLAQAVPAKAQDLEITQSLGRVETFVTSGKPTALKP
IGRGLELVAISHPNDLYSDEAATFQMMVDGKPAAGLEVTIVPDGSRYRDQVGEIALKTDAQGKFQVKWPHPGMYWVEARH
EDHAVNVPQATMRRLTYAGTLEVLRP
>AHV92420.1 dihydrolipoyllysine-residue succinyltransferase, E2 component [Bordetella holmesii ATCC 51541]
MAITDVVVPQLSESVSEATLLTWKKQPGAAVEADEILIEIETDKVVLEVPAPSSGVLAEIVKGDGSTVTSGELIARIDTA
AKAAAAPAAAAAAPAPAPAASTSAAGVASPAAAKILAEKGVDAANVSGSGRDGRVTKGDALTASAAPAKKAAAPVAPPTL
SLDGRPEQRVPMSRLRARVAERLLQSQQENAILTTFNEVNMQAVIDLRNKYKDKFEKEHGVKLGFMPFFVKAAVAALKKY
PVINASVDGKDIIYHGYFDIGIAVGSPRGLVVPILRNADQLTIAEIEKTIADFGKRAADGKLGIEEMTGGTFSISNGGVF
GSMLSTPIINPPQSAILGVHATKERAVVENGQIVIRPMNYLAMSYDHRIIDGREAVLGLVAMKEALDDPQRLLLDL
>AHV92421.1 sensory box protein [Bordetella holmesii ATCC 51541]
MSMSPRAVEQQALLDQLQHIACGLSQTFAPFCEVVLHDLRDPTHSILAIHNNLSGRQAGDPTTELGLARIADAGFPQVVA
NYANQFADGRQAKSTSIGIKDSSGTYVAALCLNVDLTLFRSMQSLLGQFSTLADGAAAQETLDPPGVQALRMRIDQFAAR
LASTPRSLKPEERRQLLRELKKEGYLDVRRAVEVVAQHLGVSRATVYGDAK
>AHV92422.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MTNDVHSMKHHTQPWAGYQARNFRWEVSADGKVGSITLNRPERKNPLTFDSYAELRDLFRGLVYATDIKVVVLAGRAAIF
APAAMCMKLSGRSPA
>AHV92423.1 aspartate carbamoyltransferase [Bordetella holmesii ATCC 51541]
MSISQQAFLRDAMRRLNLTRDVFAARIGVKRRALDTWLLPEGSQEFRAMPEVVERFISEIVQNRDLLEKYTQSVQGGPLC
DRIALNGKHQLISVDQFTRESVEDLFRVADMMQPIARRQKVSRVLEGAVLGNLFFEASTRTRVSFGSAFCRLGGSVCDTT
GFTFSSMAKGESIYDTSRVMSGYVDAMVIRHPDKGSVAEFAAATNIPVVNGGDGPGEHPSQALLDLYTILTEFSRLGKLL
DGAHIAMVGDLKYGRTVHSLIKLLSLYKGLRFTLISPPGLEMPDYVLEQAARNDNVIEQKSSLAELAGADVIYATRVQKE
RFANEESSEGYTAEFQVSRAIVDAYCGPDTIVMHPLPRDSRPGANDLSVDLNDDPRLAIFRQTDNGIPVRMAIFAVLLGV
EGLVQHSMRDVTWRHPSHVGPDDSSFHGLD
>AHV92424.1 hypothetical protein D560_1101 [Bordetella holmesii ATCC 51541]
MLRRNFGWKGELRAVGDVMIDTIYYQARVGFDSFLVKPGHDPQQALQAFKTFSVRYQQTYPIPA
>AHV92425.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MRFALQSLTSPQVIDRVASREVELGIVYEPVVNSEVHTEELVRSTVACVMREDHPLAGHKEIHAQELAAYPIITYLPQAL
MRSYVDGVLNEAGVVPHIAVQVSLSLTGMIMAYHGAGIALVEPFLLASIKLPGLVTVPLIPRAELKTLLVYAKSAPHSEL
MKLFIQHLRKEVTAISGELPVGSRPTRSRAGRKAASKP
>AHV92426.1 hypothetical protein D560_1004 [Bordetella holmesii ATCC 51541]
MQRTLGLRAPKMLVRDFDWAESVFFGAGLHESRLRNNETILPGRIRQEQ
>AHV92427.1 fimbrial family protein [Bordetella holmesii ATCC 51541]
MAALCIAPAAQAVDGTITITGEITDQTCKIDSKDPPHDLVVTLPRIGPLALKEINSTAGATPFAIRISDCPDSLSGTVNA
YFEPGATTDYGTGNLMAYNEVLPTGIPSSIPDRSQAILFNNVQIQLTNLNGSVIKLGQPVQEQNAQSVPLSGNTTKTATL
RYLARYIRTTANPLHAGKLLTFVQYSVVYP
>AHV92428.1 hypothetical protein D560_2903 [Bordetella holmesii ATCC 51541]
MRKLLLSLVLAGAIARTAQAADLNVTVDIPRLDVAEYHRPYVAIWIERDDQSVAGDLAVWYDVAKKNNEGTEWLKDMRQW
WRRSGRNQQFPVDGVSAATRPAGRHELAFTDKSKPLADLKPGRYAVVVEAAREVGGRELLRLPFVWPPQSAARQTAKGEH
ELGDIAVQIKP
>AHV92429.1 spoVR like family protein [Bordetella holmesii ATCC 51541]
MNAIATGQEVGAPLSDGSDWTFELLQRYDDAISAIARDYGLDTYPNQIEVITSEQMLDAYASAGLPIGYPHWSYGKEFIR
NEQSYRKGMQGLAYEIVINSNPCISYLMEENSMAMQALVIAHACYGHNSFFKGNYLFRQWTDADGVLDYLVFARKYVMDC
EERYGIDVVEALLDSCHALSLHGVDRYKRPPPISLREEAQRQSERAEHARLQYNDLWRTLPRVDAAPQARASGAFPPEPE
ENLLYFIEKHSPTLLPWQKELVRIVRKVAQYFYPQSQTKVMNEGWATFWHYTLLNRMHQLRLVNDGFMIEVLQSHTNVVS
QRGFDERGYGE
>AHV92430.1 glycosyltransferase 9 family protein [Bordetella holmesii ATCC 51541]
MTPRSDTVAYDAALHLDELRQARRIAVLMAPRLGDSALMMAMAANLARNGREVVVFGDFIYGMREAFAGMDVRPSLAEGQ
AKAVLADFDCAVQMHVGWPYPLHDYAKHYFYYDAHVVITGKGFVKLEQIRDFCHDAIGLPDCTQDNGLRPPAHWVFRKYP
RRVAIHPSSTSEQRCWAQAHFVDLGKRLQRQGYEPYYILAAHEREQWRCLEEQGLPIQQSPSLLDVAHFIHECGWFIGNE
SGIGHLASNVGIPTLTLTGRPTRTRAWRPAWAPSRIVYPAYIPGGVGAIGCGENGCCLRTSCGLSSDWCRSAIIRPSLRD
SRQRMADSAKRDRVSLCR
>AHV92431.1 peroxiredoxin, Ohr subfamily protein [Bordetella holmesii ATCC 51541]
MSLEKILYRAHAQVTGGRDGRAVSSDKHLDVQLSTPKELGGAGGQGSNPEQLFAAGYAACFIGAMKFVAARERMSLPAEL
SVQGAVSIGPLPHGFGIEVELTISLPGMDRDAARQLIDNAHIVCPYSNATRGNIDVTLTLA
>AHV92432.1 HMGL-like family protein [Bordetella holmesii ATCC 51541]
MTRDVCLREVGLRDGLQSVSAFVATQDKLEWIRQEAAAGVAEIEVTSYVPPKLLPQFADAEQVTLGALQIPDLTVAALVP
NTRGAERGLALGVHKINFVMSVSETHNMKNVRRSREESLADFRAMAQQVREQPVRPILCGGLATALGCSYEGRAPVDDVV
RYAVALAEAGADELIVPDTVGYAHPALVRRVFKAVLAEVGTLPVAAHFHDTRGTGLANLLAALDCGVRAFDASLGGLGGC
PFAPGATGNIVMEDAAYMLESMGIDTGIDLEALLGVRQRLQATLPDATLYGGLARAGLPRGFIPARESLAA
>AHV92433.1 glycine zipper 2TM domain protein [Bordetella holmesii ATCC 51541]
MKTKTISKACLAVALAASMAGCSSWDGMSHRQKSTVGGAALGGVAGAVITNGGILGTVGGAAIGGVIGDQVGK
>AHV92434.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MNDRLSRVQASRSAAVKATLDYPVIDTDVHVNDYAPILEDYVQHYGGAKLVDALRRALGARFATKSQGRDWYAQTAEERQ
YNRTPRAPWWARVTRNTLDLATYTLPELLYERLAEQGSDYSVLFPNDVLAPLAARDDTRQALHRAINHFHADQYRKYADR
LTPVAGIPMSTPQEAIEELEFAVKTLGLKVINIPGGVKRPIKAIADKYPASDYPEIAKHAHYTDFYGIDSEYDYDPFWAK
VVELGVPVTTHYGSQGWTGRQSISNYMFNHIGHFADGSQAFAKALFFGGVTRRFPGLRVGLLEGGADWGSHVYTHLVDRW
EKRNRVAVQNYNPAHADLALLKNLFERYGADFIKGRDIDPAQLLRDSLGISALPHSRDPNPDELDDFALAGIESVEDIRA
RWVDSFYFGSEADDRTVAAAFNDRVNPLGTKINAIWSSDVGHWDVPDLTEPLAESWDLVEQGVISAADFKAFVFGNPYRF
YTEANPAFFVGTEVERKLASQAKAA
>AHV92435.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MLAPLFEPRSLLIVADRNLPATAVLPGPLRARTTLVDSPPGEAPQLPERCTGLAEGERVDLALVCVSPAVLPETLRRLTP
LAPRGLILLPHELPDPYPRGTLALCEDWAREHDCPLLGPRSFGAQRPHAGLNLSQHPTLARAGRVALVAQSRSIMASVMD
WAEDVHIGFSLAVSLGDEAVVGPTQVLDYLASDPRSDSIVLYLENIGPAREFMSALRAAASVKPVIVLKAGRSEPGGADA
VFDAALRRAGAVRVRYFVQLFSAVKVLGYARRPRGRRVALLSNGSGPPQLALDLIGPEAAVLKADLSPATQRTLAGLLEP
DAAAGNPVITYPPLTPERLQQLLDCLLDDGGVDGVLVLLAPDALADMPAVARQLAQIAPKARKPVVSCFMGDAGMRPLRR
MLDDAGTPAFRTPESAADAFGVLATHYYNQQLLLQTQPPEPPGRLPDVHVARTVIEAARSAGRRDLTPAECRILLDAFHV
PLREGPMDIRPVEPESRPMAIRMRTDPAFGPVIRFGAGGPDAVLSVAERGMDLPPLNNFLARQLVERSRIWRRVLAPQVS
GAATEALQHALVQVSELVCEMPDIESLDIDPLYAGESSLRAGGVRVTLTESPACASPQTSGYPHMAIHPYPARLVQMRRF
DDGTPWMIRPIRPEDGESLQEFIRGLSERSRYMRFVSMMRELTPRMVARYTQVDYHRELALVAATQVPNPANRGHPREVI
IGFAHYLRNPDGRGAEYALVIGDDWQRMRLGGQLMSALIAEARAQGLEYIDGLVLSTNRPMLTLMTRLGFVNDVDPEDPT
MRRVWLFLRPDPDTEAGGDVDGAD
>AHV92436.1 isoleucine--tRNA ligase [Bordetella holmesii ATCC 51541]
MDYKKTLNLPDTSFPMRGDLAKREPGWVQQWEENRVYQAIRAASKGRPLFVLHDGPPYANGDIHIGHAVNKILKDIIVKS
RNMAGFDAPYVPGWDCHGMPIEIQIEKKYGKNLPVTEVQAKARAYAHEQLDRQRKDFKRLGVLGDWDNPYLTMNFRNEAD
EIRVLARILEKGYVFRGLKPVNWCFDCGSALAEAEVEYADRVDPAVDVAFPFIDKPGLARAFGLDSVDDGAVVIWTTTPW
TIPSNQALNVHPEIAYALVRVSPTPVHGPLVLIAKERVEACLQSWGLEGEIIATAPGEALAGLRFAHPLANAAEGYDRTS
PIYLGDYVTLDAGTGVVHSAPAYGIEDFVSCKAHGLVDADILSPVMGDGKFASTLPLFGGLTIWEANPKIVEALKLAGSL
MHVQKLSHSYMHCWRHKTPVIYRATSQWFAGMDVTPADGGPTLRESALAGIEATAFYPAWGRARLHSMIANRPDWTLSRQ
RQWGVPMAFFVHKETGELHPRTVELLEEVAKRVEKGGIEAWQSLDPRDLLGDEADSYEKNRDTLDVWFDSGSTHATVLGG
KDHALAGSHGEQLAWPADLYLEGSDQHRGWFHSSLLTGCMLYGQPPYKGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDS
LGAEILRLWVASTDYSGELSISDEILKRVVEGYRRIRNTLRFLLANVADFDGVNQAVDFGDLLEIDRYALAMTAQMQSEV
LANYERYDFHPAVSRLQTFCSEDLGAFYLDILKDRLYTSAPDSHARRSAQTALLEITQTLLKLMAPILTFTAEEAWTVLV
GSALKHQADAARLTILTEVYHQLPPYADAEALTGRWTRLRAIRADVLRKLEDVRSEGLIGSSLQAEVDLYAQGQDHELLA
SLGDDLRFVLIVSRATVHARDGELTIEIAPSGNKKCERCWHWRSDVGQDANHPEICGRCVSNLFGAGETREKA
>AHV92437.1 hypothetical protein D560_0197 [Bordetella holmesii ATCC 51541]
MIGDFRVRCTVVQEEGNQYSVQICTRRVGGNAPEKCWTVPGQVSYQDREDAERTSQQIFERINGVRFNGEPEFAHASA
>AHV92438.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MQPNKPHSGVKHLVAAALATAATWAPLSASLAAYPEKPIVIVVPFSPGGSTDQIGRFVAEHLQKQLKTPVVVENKPGANG
TVGNGYVARAKPDGYTLLIGGTDIAASPFLYKNLPYDPKDFIPLGLAAEFPFVMLTSKKKGITTVQQFVDYAKKNPDKVS
FSSAGMGNSTHLAGETFKKSAGLDGMLHVPFNGSPQALTAVISGQVDTVFDTAITAVPMVTGGQANALAVIAQQRLALLP
DVPTMTELNYTEFSKLVPWSWKGVFAPAGMPPEVVKQLRASLAALVTDPTYKQRIENAASLTVPPKSPKNWRSSWRISAW
DGSASSKKLRCSPNKRPQATVPTQLLWTERPMLGPDLPPDLVRHRHRAQG
>AHV92439.1 translation elongation factor Tu [Bordetella holmesii ATCC 51541]
MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLSTKFGGEAKGYDQIDAAPEEKARGITINTAHVEYETEARHYAHV
DCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIIVFLNKADMVDDAELLELVEMEVRELLSK
YDFPGDDTPIVKGSAKLALEGDKGELGEQAILALAAALDSYIPTPERAIDGAFLMPVEDVFSISGRGTVVTGRIERGVVK
VGEEIEIVGIKPTVKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVLAKPGSINPHTDFTAEVYILSKEEGG
RHTPFFNGYRPQFYFRTTDVTGTIDLPQDKEMVLPGDNVSMTVRLLAPIAMEEGLRFAIREGGRTVGAGVVAKILK
>AHV92440.1 apbE family protein [Bordetella holmesii ATCC 51541]
MQHTILPVRHYGAALYRAVALTGATMGTTWSARLSASLCLSDAPIRAAVQTALDEVVSQMSHWDPDSDLARFNRAPAGWH
ALPPALLHVLAYALALAGETSGACDPTLGEWVDMWGFGPRRDVSEPPSAALLAQAGARCGWQRLALDLPRGLALQPGGLR
LDLSAIAKGYGVDAAARALDALGLQHYLIEVGGELRARGVRPDGQPWRVAIEVPDGSGSHALSVPLKDLAIATSGDYRRY
GEHEGRRYAHTLDPRSGRPLDNDVASVTVVHTGCMQADALATALTVMGQADGMDYARRHDLAALFIARDRDGLRLAPTPA
FLALDVVRL
>AHV92441.1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Bordetella holmesii ATCC 51541]
MKTKAAIAWKAGAPLTVEEVDLDGPRAGEVLIEVKATGICHTDYYTLSGADPEGIFPAILGHEGAGVVVDVGPGMTSLRK
GDHVIPLYTPECRQCKFCLSRKTNLCQAIRSTQGKGLMPDGSSRFSIDGKPIFHYMGTSTFANHIVVPEIAVAKVREDAP
FDKICYIGCGVTTGIGAVVYTAKVEAGANVVVFGLGGIGLNVIQGAKMVGADKIIGVDLNPEREAMARKFGMTHFVNPSD
VENVVDHIVQLTDGGADYSFECIGNTKVMRQALECCHKGWGQSIIIGVAEAGAEISTRPFQLVTGREWKGSAFGGARGRT
DVPKIVDWYMEGKINIDDLITHTLPLDRINEGFDLMKRGESIRSVVLY
>AHV92442.1 iron-sulfur cluster assembly protein IscA [Bordetella holmesii ATCC 51541]
MAVTLTQQAANHIGRYLQRRGKGIGLRLGVRTTGCSGMAYKLEYVDEAQADDMAFESFGVKVFVDPKSLAYLDGTELDYA
REGLNEGFKFRNPNEKATCGCGESFTV
>AHV92443.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MVAGIDVVLEGVRHTYHGVPVLAGIDLEVPAGTVLALLGPSGCGKSTLLKSLAGLLRPSEGRILLGGREVAGPAGFAPPE
ARDLGMVFQDYALWPHMSVAQNVGFPLQMRRVPRGQRAAQVAQALELVGLAGMQTRRPSQLSGGQQQRVALARAIVAQPS
LLLFDEPLSNLDRALRESLCGEIGRLLRRLGTTAVYVTHDHDEAHALAHRVVRMDAGRIAAVVNL
>AHV92444.1 putative membrane-associated protease [Bordetella holmesii ATCC 51541]
MIACLPWILIFPAYVLLWWPPAYRPALALLLAGLACAAWRDWLEPSALLAFALLLASAKLQRGRCPAFGHTLFVLTALAL
ALHRLPGFHNPLIIDQAIKPDSVPLRMYLNLDKPLIAWWVLRVMAPPLIRGG
>AHV92445.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MLPLVLIFLYALAPILGAVLVYHNPQWWPQDASNYGSLVQPQRPLPSGRELQLTTLDGKAFDPASLKGQWLLISADHGEC
LQACARKLFVARNAHASQGKNVDRVTRVWFVTDEADIPQKVLDAYQGTLMLRARADQLARFLPPDTAGGILGPIWVVDPL
GNLMLQFPADADGVKVRKDLSRLLYNSRIG
>AHV92446.1 EPSP synthase family protein [Bordetella holmesii ATCC 51541]
MNHKNAVLPILCATLLTDQPLRLIGVPEITDVKKILDIFRQLGSDVNVDFASGVLDLHHCHTAFDPAHHHLPEEMRSSIM
LVPPLLARFGVARLENDVKGCTLGVREIDPHVEVFERFGARIERAPHSLIVRADGKMAANDHWLDYASVTTTENFALCAV
AAQGVSTLVNAASEPHVQEFCRFLEMLGVPISGIGTSHLRIEGGQRLGGGEFRFDEDFHEIATFLALGAITGGAITVKNS
APEQFPLIDRTFAKFGVEVEHHDGWSQAHCDGPLQVRRPFTQNILTKVEAAPWPYLPVDLLPIFIALGVRAQGSAMFWNK
VYDGAMGWSGELSKFGAHVFLSDPHRLITFDGLPLTPAKVESPYIIRVAIALLMVAASIEGRSEITNALPILRAHPNFVE
NLCSVGACVEWTEGD
>AHV92447.1 penicillin binding transpeptidase domain protein [Bordetella holmesii ATCC 51541]
MKRVPFFDNPVLRGQLPMWRARLVLIMLFAGLAVLAGRALFLQGLTNEFLQQQGERRYERTLTLSATRGKILDRNNVVLA
SSVPARAIWAIPEDAKVATPEQINTLGKLLEIPAAELRRRLTDDDRNFVYIKRQVPMDVADKVKQMGLPGIHQQPESRRY
YPEGEVTAHIVGFNNVEDQGQEGVELTFNQQLSGRPGSRRVIKDRLGRVIEDVQAVTLPVDGRDLRLSIDTRLQYLVYKE
LQNALDKHQARAATAVVLDVHTGEVLALANLPSYDPNRRENWKVTTLRNQAITDTFEPGSIMKPFTAALALDLGRISTST
MFDTGNGRFQYQGSTISDVSRNGMLDVAGVLRRSSNIGMTMISEKLQAREMWDRFTELGLGQAPQLGFPGAAPGRLRPWD
RWRLIEKATMAYGYGLSVSLLQVARAYTTFARDGDMVSLTLVKRDSDPTSVKIYSPKTTALIRSMLEAAAGPDGAKAAQV
QGYRVAGKSGTARKIVDGKYSTHRYRSSFVGFAPVSNPKVVVAVSIDEPQVGGYYGGAIAAPVFSSIVGGTLRLMGVQPD
APFESTIVAGSRAGARDESRTHRRRERSAGLAGPARPSGGAGRPAPGLARGASRRRVPRVPRRAWRWPPLYRAGAGCGRG
GSGL
>AHV92448.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MKDRPITTIDKDGIDAPLTDVVYQRMLDSIYAGALAPGSVINEVELAREFGVSRGPVREAVRRLQGIQIVTREPYTKARV
VTMTAASALELFQVRMGLEGVACFLATQRMSDAEIEHLQRDLESHQRGRTGHEQPDRHFDLHERIVRASGNQRIITALCD
DLYHLLRIYRRHSGSVLERKDDALEEHWQIVRAISRRDARLAESLMRSHIERAANHVANQLSGSQ
>AHV92449.1 bacterial Ig-like domain family protein [Bordetella holmesii ATCC 51541]
MNKNIYRLVWSRARGAWVVAGEWARAMGKAGGQRRRMRPRLRQTTAAMISGSLLAQALLPVSVAAQGIPTLGPTRPSPQE
ASAAEDRSWEHRLAAQAQSLAQAQAEREPGARLDADYLKREAQAQANDVLRGGVSLARESGLPFLRNLQGAVNVDFDSGR
SSVQLNTIDEVFRAGPATGLVQVGAHNQNSRPTGNVGAVYRHEVHEALMVGANGFLDYEFGKQHLRGSLGIEAIAPEFSL
HGNVYVPISGWKGAKRDNRREEKPASGMDVGVQYSPAFAPGLSLKTSYFRWNGAHVDYYDSGRSQAGAKGFKVGVEYRPV
PVLSLGLEQTQVMGGGGQTRLQLGLSVNLSEPLSKQLRRPDSDAPVFSLDGRRHTLVERENRIVLKTRRKQIVLPLTVTS
VSTRQADGRITISGLTHAGATVTVRLPDGSTGVAGADAAGRFTYLSAEDQPSGLIVLRARNAEGDSSREVSYQYVDEVRP
GSLRVAVTSLVTQPVVRSLEVSGRTEPQADVQVSFPNGESIAAKADDQGMFKVRSKREVKQGQVVVQATHPQTGMRVSTS
THYQPPSVQAPTIETVVTEAKTGRVTVTGKADPGARVDVRFPDGSSQRTVAGKDGMYQVVSAGDMVSGDIRAQATGQDGS
TSPVAVQAYDDAQDTTPPEAPEIRLITTDDASGRVAVNGRAERGADVTVNFPDGTVQRVVAADDGSYRVVSETDMVAGDI
QVVAADAAGNKSAVSTHRYVDVVDKTAPAAPIITAVTENPADGRLTVAGKAEPGAQIDIVFPDGTLAQVVAGDDGSYEAT
STRDMVSGGIDVRAKDKVGNLSEVTTRHFDDRVDKTAPAEPTITTVVTDPATGRVTVSGKTEPKAQVTVSFPDSTVAQGV
AGDDGMFSVTSAGDMVGGDIRVQAVDQAGNQSPQARQRYDDAPDTTPPAPPSITSVVTDPKTGRVTVKGSSEAGAEVTVT
FPGGASQKVRAGADGSYSAKSAEDVMTGTIQVEAADLAGNKSPRMTHEYMDTVDKTAPDVDIDRLEEDRSTGRVTVIGTG
EPGARVMVTFPDDSTKTGDIDASGNFRVESDNDLETGYIEVTSQDKAGNTSRVSRVLHTDKVDKTAPAAPIIAEVTTDPT
SGRVTVKGQTERGAQVEIDFPDGSKQTGTADGSGNFSVTSANDQPSGQITATASDKARNRSAPATRQYTDTVDKDAPDMP
TIADAVTDMTTGQVTVTGKAEAEATVTVSFPGGGSKTVQAGKDGRYSVQSDDDVPAGTITVTARDAAGNTSQPTKKNYTD
SFAQTHRISRLDTNPQNGIVTVSGKAQPNEALVLRLPNGDEVSLSAQTDGSFTASSTTDVPAGEVQLLSRANGQQTVLAK
RAYTDTFTKGRSDPSLSTAIQYRFFGVRPQETSATLMSLYMATFRKGPPVVQILDASQQDKELAKRAAKAFTLKIVPDYN
QQKYDVQVSWPAGTFTDADTGRLTNLKVKIFDTGTGNYLATRGQIYFEPPHN
>AHV92450.1 CBS domain protein [Bordetella holmesii ATCC 51541]
MPVRFAHWLRAFAPAPVGASLREKCYGALGALLGLLCTAWIARLALGQASPWFIPPMGASAVLLFAVPASPLAQPWSILG
GNVVSALIGVVCARYIPDVALAAAAAGGLAIAAMFALRCLHPPGGAVALTAVLGGPAVSQLGFGFAIWPVGINSLALLCV
AVMFNGLLKRPYPKRTHDTPSPHATRNPLPSERLGFSADDLRQTLDSHEGLLDISPDDIQDIILAAEARAAARRHATVQC
ADIMSRDIVRLSPQDTLDHAQALMRHHRLHTLPVVDPPPVPTWACCMSMPPRRARRQAARWSIASVAMAPSPPKTCRRSP
WRAPWPTGCMACRCWTTMGS
>AHV92451.1 ring hydroxylating alpha subunit family protein [Bordetella holmesii ATCC 51541]
MIELYPHVLVLSTLYPKGPQETLNIAEFYYPEEIALFERDFVQAQRAAYMETAVEDDEIGERMDAGRLALLRRGVSDSGP
YQSPMEDGMLHFHEWYLSNMGEQLGDSAAPHVASTQRPMPFRS
>AHV92452.1 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Bordetella holmesii ATCC 51541]
MADGAKVTLSLFFITLALAVPLGLVLALARISKFKLLARLVNGYIWLMRGTPLMLQLLFIYFALPFVPVIGVRLPDFPAA
IVAFALNYAAYFAEIFRAGILSVDRGQYEGGKVLGMTYLQTLRRIVLPQMVQRVLPPMSNETITLIKDTSLIYVLALNDI
LRTARGIVQRDFTTTPFLVAAAFYLTMTLVLTWFFQHLEKRYAKYDQ
>AHV92453.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MAHNLSWLRVFYFLYYGLQGISIPFLPLWLSSQGLDKDAIGLIVATAFLPKILSAPALAHAADLTGRLRLLIALPLLGTA
LLFAGYPWQQSLGWMFWTTLGVNLLLPAVQPALDRLALASNRAGRPLYTTVRVWGSLGFAALTLAGGYLIRETGPLAIIV
LSVTLALACVACLRALSAGEIPPRRPHAAQGLPLLRVLRLRPVVLCILAASLTQASNGFLYSYATLFWTDHGLSTTDIGL
LWTAGVGAEVVFFFLALLILPILGSQRLIWISAAMTAVRWVGLAMFVEVPVLLAFQLLQAFTLGGNNSAIMAYISEHVPP
DCQTSAIALYTVLSGGVLMFFSVNAARLVYPQVQWGGFAMMAAFALCAVPIVLWAQRHDAQSGETS
>AHV92454.1 degT/DnrJ/EryC1/StrS aminotransferase family protein [Bordetella holmesii ATCC 51541]
MIDFRSDTVTRPSAAMLQAMTCAPVGDDVMGDDPTVVALQQAVAERADKEAGLFFPTGTQSNLAGIMAHCGRGDEYLVGQ
LAHTYKYEGGGAAVLGSIQPQPIEHDGDGSLPIAKLEAAVKPVGDAHYARTRLLALENTFHGKVIRQPYILEATAFARSR
GLGTHLDGARVFNASVASGLALSELCQPFDTVSICFSKGLGAPVGSVLVGSQALIEQARRWRKVLGGGMRQSGVLAAAAQ
YALEHNVARLAQDHEHASLLGQGLAQLPGVQVLSQSTNMVFVSVAPEHRSRLNQGLKEAGILMSAVYDGPVRLVTHLDIS
RQDIERALQVFARLLSA
>AHV92455.1 acyl transferase domain protein [Bordetella holmesii ATCC 51541]
MRLPVLFEPACASAIADGFNSFVEIGPHPVLRGYLKDALHTAGATGRILITASRGSDDPEKIHDVAAQLILSGADVDWGT
LFPWQGEHANLPAYPWQRERHWHAITAESPLLLTRKRAHPLLGYRHAQHPGLWENVLDTQLQPSLADHVVGEAVVFPGTG
FAELALAAALQSHPGDYADIEELEIRAPLLLAASPSKRLRFELDEADGRFRILAREQGSQEPWTPHASGRIRQEAGAIGL
GQIPALNIPTRPPDFDRHDHERLTRAVGLDYGTAFRAVAHGWNESADSVLAVLQPDASLAAELASTHLHPALLDCSFQLI
IQLLKDDPAIGQGIAFVPAKIGRLSLHAGQGQPSYARARLRRRAPHSLTADFVLFDAQGRPLASVRDARFRSIRLSKGAG
EHLDVIDCVLTPRPHPLAPAADNPLQTSALLRDIERMLETTAQRANDRYAQEVDPCSRACATGCRWKPCAPRPRAG
>AHV92456.1 mmgE/PrpD family protein [Bordetella holmesii ATCC 51541]
MTTSDTTTRLSAQLAHHAVHADIDHIPAEVRLRATHLMLDALGIALASTQWDFARQTLAGLRELAGPGGDQPVIGHGQKL
PMRDAVIMNALLVHGLDYDDTHPSGVIHATTSVLPAVLGLSTRLNASGRDLLNAYVLGMETATRLGAAAKGGFHQVGFHP
TGLIGAFGCTLAAARLLRLDTARTIDAQGIALSVASGSLECLEDGAWTKRLHPGWAAAAGITAATLAKHGFVGPGAAYEG
RFGLYPSHLGALYEKCDLGMVTAGLGEVWETLNVAIKPVPACHFTHAFADAAGLLSKTWDGAPIRRIVAKVPPGAMKAVC
EPRDKKLRPSNAYEAQFSVPYSVATGLRFGRFTLDALDPAAWQDPQPLQLAALVECVPDPQADFPRYFGGEVHIELTDGR
VLSHAEPINRGAPGRPITNEDIVVKFYENASRAVDRKHADRVLNAVLNIEHGSAAALSELLGVQARMENRQ
>AHV92457.1 putative thioesterase [Bordetella holmesii ATCC 51541]
MNPATTPHDRPASYHAQRRSGLDRRLRPHERRSLCRRLRWPGFRTSGTGGRGPGLHPHERLRHLYDAYPGRLHARGARRR
SPGAATALARCR
>AHV92458.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MKSRILVAAMAAGLLAAPGGAALAQALKIALSSEPTSADPHYHKQTQNDAFSAHVYDSLVGRDANMQLKPSLAKSWKNLD
DLTWEFKLRDDVKFSNGKPFTADDVKFSNGKPFTADDVRFTICRTLNNETNISQSYMDMTKRIADVQTPDAHTVIIKTSE
PLPLLPAELARGLPIIWNGIVEHGKLSFDPKAGCGVTGKWPTVADFNNGKDAIGTGPYMLKSYVKGTGIELTRNDNYWGE
KPAWKDVKFVPVPNAGPRLTSLLSGDFDVIENPAARDLQRIKSNPQYGYVATPSTRLVFFQPDVGRKESPFVKAADGKNP
LQDLRVRRAISMAIDRKTIVARIMDGLATPAYQYMPDGMFGGLPNAPEIKYDPEGAKKLLAEAGYPNGFEMTISTTNDRY
VNDGQIAQAVAQYLSRIGIKANVDAMTASIYFPSGQSVSSASRLAADLLKSVKPPACSNCGWPRWTRPKVWAPAITAAFP
TLTSTRSINRPS
>AHV92459.1 flagellar biosynthetic protein FliQ [Bordetella holmesii ATCC 51541]
MTADTVMTMAYQAMKIALALAGPLLLVTLVVGLVISVFQAATQINEMTLSFIPKLLAMCGVLVLLGPWLIDLLVDYIRQL
ISGIPMLIS
>AHV92460.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTHECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92461.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MSAFLLKARLPARPLPYALACASLLVLQPSHAQSDPATAATLAPVIVTGNPLGSEALSIPSTVLSGDALDLRRADSLGET
LNGLPGISTTTYGPMVGRPIIRGMDGDRVRLLSNGVGTLDASSLSYDHQVPNDPMASERIEILRGPAALLYGGNAIGGVV
NTIDNRIPSEPIDGVQGQVQTQYTSANNGRSGGAQVEAGNGNFALHADVYGRDTDALRIPGDARSARLRAAEPDVSSARD
RLPNSDGRDSGGAIGMSWTADHGYAGLSYSGYDSDYGSVAESDVRIRLRQQRFNAAGEVRDLDGLFSRLAFSFGYTDYQH
KEIDDGQTGTTFKNHGYEARLEAQHADIGPISGVSGLQLGQARFSALGDEALVPTTRTDSLALFDVESWRVNERFTLSAG
ARAELTRLDPADNGNERFADSQKRRFTAGSFSLGGVYLLNPVWSLASNLSYTERAPTFYELYANGPHEATGQYLVGNPDL
GKERAWSGDAALRWKHEADHGSVGVFYSSFGNYLAELNTGRMRDDDGNVLAAADEDALPEAVYRGVRTEFYGIEAESSTR
IFQSGGDTVDLAVGGDYTHARNLDSGEPLPRIAPLRLMAGLDWRRGPWDAGAQITKAFAQHRQPEDDTPTSGYYRLDAHA
GYRFKVGATRWQAYVRGINLTNQEIRYATSVLRDVAPQSGRAMLVGLKGNF
>AHV92462.1 lysE type translocator family protein [Bordetella holmesii ATCC 51541]
MLFLAADLALKLTPGPDMALTLTRGMTQGFRVAWLSVLGTWSAGFVQIPLVVLGLAALFQHSPTLFSAVKILGAMYLMYL
GVRALRRCARPNVNLQAASAADSARDAYWQGLFTNLLNPKVFLFLVAFLPQFTDAQRGPIWVQMLLLAVLSKMLGLGTGA
CMAYGASRIRGWLMRNPWFMRFQDGVLGMAMLSIAGWLLVNRDPLPSR
>AHV92463.1 hypothetical protein D560_1963 [Bordetella holmesii ATCC 51541]
MNEIPLPEDGDGVQTSSPGFANQFLMAMPGMVDENLAGTVIYICEHSARGHWAWSLTGLLI
>AHV92464.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQARGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRSYGYRDQEYFFLKIRSA
FPGIPR
>AHV92465.1 RNA methyltransferase, RsmE family protein [Bordetella holmesii ATCC 51541]
MSLPRFYCDPPLAAGQRICLPLALAHHAIRVLRLRDGDDIVLFDGQGGEYPARLQIEGKAGHAQLGEHLPREAELPGRIV
LAQGLPSGDKMDWIVEKAVELGAAAVQPIAAQRSVLQLSGPRLEKRLTHWERVAQAAAEQCGRNRLTQIAAPLTLREWLA
QPAQGPRLMCHPQAGDDLSGWLRQQPAPQALTLMIGPEGGWSAEEIATAKTAGVVSVRFGPRVLRTETAALALIASISAL
LGWS
>AHV92466.1 pantetheine-phosphate adenylyltransferase [Bordetella holmesii ATCC 51541]
MVVGVAFSRNKKPFFSIDERVEIAREVLGHYPNVEVRSFGGLLKDFVREQNGRVIVRGLRAVSDFEYEFQMAGMNRHLLP
DVETLFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVERWLQAKAKERREQSWPNNAG
>AHV92467.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MYNTLELEGRLGTGRIAHTLLVGLETGAQQRQPRLSRAIGNVPSLDLYDPDLSQQHGAGLALRSDNHHRVRSAALYVQDQ
LALGESWRVLLGGRLDQFRVHTRDRLRQRAESRSNHSFSPRLGVVWTPLDGQAFYLSYGKSFAPAGGALIGITPGAAENT
LAPEFSRQYEAGIKSDWLGGRLGTTLAVYQLELYNRRTRDADDPTRIVLRGLQRSRGVELTLSGRLSEHWHVRGGLGLQQ
ATIVRDGSGLAGRRVSNVARYNGSLFVGYTAAAGWFAETGLTLVGARYADSANQVTLPGYARWDGSLGYRHARWEARLAI
RNLADVRYFRSATSAGQIQPGEPRSLVATMALRF
>AHV92468.1 glutathione transport system permease protein gsiD [Bordetella holmesii ATCC 51541]
MRTPLTEFWRKFKKQRLAVGAGIFVLILIAVAIFAPWIVPYDPENFFDYDALNAGPSWQHWLGVDSLGRDIFSRILMGAR
ISLAAGFLSVAMGAIVGTFMGLMAGYYEGWWERITMRISDVLLAFPGMLLAIGVVAILGSNMINVIVAVAVFSVPAFARL
VRGNTLAIKQMTYVEAVRSVGASDWTIIMRHILPGTISLIVVYGTMRVGTSIITAASLSFLGMGAQPPTPEWGAMLNEAR
ADMVLAPHVAIFPALAIFLTVLAFNLLGDGLRDALYPKIDRR
>AHV92469.1 zinc-binding dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MMYSLGLLSDEAIENGFAGPSLGLEFAGVVSRIGPAVTQYRVGEAVVGFGPASFGDRVLTRAAAISRIPANFSFEAAATI
PSTFFTVYYALHHLAHLQEGEKILIHGAAGGVGIAAIQLAQWLGADIYATAGSEEKRDFLRMMGVAHVYDSRSLAYADEI
LAETGGQGVDVVLNSLAGEAINRNLQVLRPFGRFLELGKRDFYENTRIGLRPFRNNISYFGIDADQLMNERPDLTQRLFG
EMMQLFADGALHPLPYTVFDANDVVDAFRYMQQARQIGKIVVTYRHGIRRLHRPADPPAEPLVLAADASYLVTGGLGGFG
LRTAQWLVEKGARHLILISRSGPQSDQAKEALAAFKAAGVSVHAAACDVTDRDALQKLLAHTGRSMPPLRGLVHAAVVID
DGLARNTCAAQIERTMAAKVLGAYHLHALTRDAALDFCVYYSSATTLFGNPGQSNYVAANMWLEALAMHRRASGLPATCV
RWGAIDDVGFLARNEAIRDALQSRMGGSAIPSGEALAALEVMLQTRSNGLAVLELDWHALNRFLPTASAPKFSSLARRAG
DSDHDAGDANDIAHLLATLDDTALQAAFGDMLKTEIGEILRVSADKIDPERSIYDMGLDSLIGVELIVALENRFGIRLPV
MALSESPTVNKLAGRLILLLRGEPAATPGDHVASTVEKLVADHAADVSATAIDAFVADLKSGEADGPQRMIQ
>AHV92470.1 uvrD-like helicase C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSVLRWAENPRSRLAGFRVAQLVAGIGPATAGKLMDAMAAAADPQACLQAFKPPVAGPQWDGLVRVLGELRASQVRWPAD
VELALTWYAPLLETLYDDAAVRKTDLEQLARLAGGYPSRERFLTELTLDPPSATSGESGTPLRDEDYMILSTIHSAKGQE
WKTVYVLNAVDGCIPSDMATDSSDEIEEERRLLYVAMTRAQERLQVIVPQRFYVHQQSGLGDRHVYAARTRFLPDALMPL
FEHLPKPPELPFGRSAGLQAASGAPVIDVGQRLRKLFS
>AHV92471.1 cob(I)alamin adenosyltransferase, putative [Bordetella holmesii ATCC 51541]
MANRLSVIATRTGDDGTTGLGDGSRVAKDDARIVALGDVDEFNSALGLLRCEPLPEEVSADLLTMQHDLFDMGAELCIPG
HTALSEAQVAFLDVRLAFYNAALPALREFILPGGSRASALAHLARTAARRAERSVITLSAQAAVNAPLRQYLNRSSDLMF
VLARYLNQAAGQTDVYWSSRHSRVSPD
>AHV92472.1 hypothetical protein D560_1018 [Bordetella holmesii ATCC 51541]
MLISKTRSSIWARSARARPWPSFWIPGRTTVSGIVLPKTESMAQVRHAAQTNIPIIPIVETAQGVLHLAEIAATPGVQRL
AFGSLDYSLDLAMTPDTEGADLVLDHARVQMLLHGRVAGLGQPLYGVFPGIQDTAGLRAAAIRARDMGFGGLLCIHPTQV
PVVHEAFLPPLADLEWAREVVRAHRDNGLAAFKLDGKMIDAPVIARARRLLVRYGHLVKITPERLAALEEQFRKRGLYLV
MGARFVVVLRQLNGLIAGSAGMPFHRFLAANVVGALAWTAVWGAGPYLAADVFVPFWHWLRG
>AHV92473.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MKTVGDKLEPFKVTGVKPGFNQYEENGVSAFEEITESSFPGKWKVIYFYPKDFTFVCPTEIVGFNKLAKDFEDRDAVLLG
GSSDNEFVKLAWRREHPDLNKLGHYQFGDTTGALIDQLGVREKGAGVALRATFIVDPDNTIQHVSVNNLNVGRNPEEVLR
LLDGLQTDELCPCNRNVGGATL
>AHV92474.1 acetolactate synthase, small subunit [Bordetella holmesii ATCC 51541]
MKHVISVLMENEPGALSRVVGLFSARGYNIETLTVAPTEDATLSRLTVVTVGSDEVIEQITKHLNRLVDVVKVVDLTEGA
HIERELMLIKVRAVGKKREEMKRMADIFRGRIIDVTDKSYTIELTGVQEKIQAFIEALDRSAILETVRTGVSGIGRGERI
LKI
>AHV92475.1 ATP-dependent protease HslVU, peptidase subunit [Bordetella holmesii ATCC 51541]
MTLGNIVIKGTARKIRRLYHDKVLAGFAGATADAFTLQERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVAD
TDHTLVLTGNGDVLEPEHGLAAIGSGGAYAQSAALALLRNTELPPEVIVKQSLEIAGDLCIYTNQNHVIETLGGQTRPA
>AHV92476.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MTQDVFTRILQGRKQVHAGQARAFLVTVARGLVIDHWRHRALESAYAEYLAGLPEAHAPSAEQRLEIMQALGTLDRMMDG
LPERARQAFLLSQLDGLSYPEIAVRLGVSVSSVQQYMVKAMSACFDVFHA
>AHV92477.1 glycine--tRNA ligase, beta subunit [Bordetella holmesii ATCC 51541]
MTTTIRPLLVELLTEELPPKALNRLGQSFAEGVRATLDRLGLLAPDCQVTAYATPRRLAVHLSAVRAQAPDQAYAEKLMP
AKIGLTEDGKATPALIKKLASKGLEHLNPATLERESDGKQDYLIARGTAPGAQLAAGLQEGLDTALTGLPIPKVMRYQLA
DGVSSVKFVRPAHRLIALFGADIVPVSALGLQAGRNTLGHRFMSEGDVVISQADAYEPTLAQARVVASFEKRRADIDQQL
QTQATRLSATLGNDPEVAALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKYFPLFDPATGKLTHRFLIVSN
MEVADPVNIVEGNQRVVRPRLADAQFFFETDRKVPLAARVEPLGSIVYHNKLGTQLERVDLVRAIARGVAEALGANVSAS
DRAALLAKADLGSNMVGEFPELQGVMGAYYAAGDGEPAEVVEALRTQYRNRYDSPVTAETLTAAVLFIAERAETLVGIWA
IGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKISENGPLSLTSLLGLAGASFPAGKVPASTLPEVQAFIYERYRNQL
IAEHDRNAVEAVIALTPPLHQVADRVRAVTTFSQMPEAASLAAANKRIGNLLKKAEGDIGAVDNARLADAAEKALAEAIA
TLGPQAGAQLAAGDFAGNLRTLAQARQPVDAFFADVMVMADDPALRANRLALLKQLHGLMNQVADISRLAQ
>AHV92478.1 MOSC N-terminal beta barrel domain protein [Bordetella holmesii ATCC 51541]
MSVTYQPIADCGSTAQAEAQPYHRRWLVSNDAGQWLSRELAPRLAEINVDVRLGYLVLRAPGMLRLDIPLDVIEDDDSVR
YQILIGGQTVDVVDEGELASAWMSNYLGIPARLLKVHPDMAAVRWPV
>AHV92479.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MKITLEEIQVFLAVVDSGSLTSAAQQLGQTVSGASRALGRLEEKLQTTLLHRTIRRIELTEEGRAFMAQARAIIGAVEAA
EEGMAVRRGQPSGRLRVDAATPFMLHVIVPLIKGYRQRYPQVELELNSSEGYIDLLEHRTDVAIRIGRLKDSTLHSRAIG
SGRLRILASPDYLARHGTPRSPDDLAIGHSLLGFNQPDSLNYWPLRDESGERRYITPTIWASNGETLRQLALQGMGLVCL
SDFMTGQDRALGRLKQVLTRHTIDERQPINAVYYRNTAISARITSFVDYLAQAVG
>AHV92480.1 hypothetical protein D560_0404 [Bordetella holmesii ATCC 51541]
MQGPSKADHAPDERHAAQAAACSIGAAVAAAALLGAAPGPVPVAERIFPVAARAPPVRRAYPILSAPLGARAPPLSLA
>AHV92481.1 outer membrane beta-barrel domain protein [Bordetella holmesii ATCC 51541]
MTRPKLALNTLAIALASLGAAQSHAAGFQLLEQNASGLGNAYAGSAANPENASIMYYNAAGITYLPGVSISAGMNAIRPS
FKFKNNGDSRNPSALGGGLPTGGNGGDAGSWGYVPNAYVSWQLTEKWYVGLGLGAPFGLMTKYDSGWDGQYHSNKFDIKT
ININPTVAYKVNDMLSLGAGLNWQHIDAEYKKKAVVPVGSLVTTGDATLNMDGDAWGWNLGMMLQPTEDTRIGVSYRSKI
RHTATGTTDIDNIRTPLGMASASYDAKAKVTLPDTLIFSVNHQLNEKWQLLGDVSWTGWSSIPQLRIQNAGAGTDELPLN
FRDSWRVALGATYKLASQWKWKFGVAFDQSPVYKASDRPASLPDADRWWFSTGLQYAVTKDTTIDLGYTYLYVRDSSIDS
TSGNALTKGRLAGDYSSKGNIIGLQVSTRF
>AHV92482.1 bacterial transcriptional regulator family protein [Bordetella holmesii ATCC 51541]
MQPLSTPSGPARRKRQAGSAGADSPDFITALARGLHVLRCFRSGPQPLGNQELAHLTGLPKPTISRITFTLTELGYLRYH
ADTGKYSPGHAALAMGFGLLAGLAIRDLAKADMTALAAQTGAAVALGAFDGDAMVYVEAMHGSSALYLRLPVGYRASLDT
AMGRAYLAALPEPARQELVSQAGITSHAMDEALRDRQASGCCFAIGQWQSGINAAAVAFSALTGEGVFVISCGGPAQLLP
EATLRDRVAPVLNQIARRLEGG
>AHV92483.1 putative transcriptional regulator [Bordetella holmesii ATCC 51541]
MMQSFRDLDEGQPAFWKLNSAEGRGPKVPLLALINCQGAVLSASDQDHLETAFRRGGWQVYRLSLDDDWEHKLGEFTPDV
LLVRSGAAGTASVTRIIRLVKGRGQGVCVAVQYGDVAPGLRIAALKAGADICFSLAETGGPWLAAELLAVVDAARRSRGQ
GLSRGWSLSDTRRTLFGPYGVTLPLTPIEGRFLARLFSSPGCCVRRGANAQGMQSRHMDVLVSRLRSKARRAGVDLPLHA
VRHWGYIFLAELTEHP
>AHV92484.1 ribosomal protein L15 [Bordetella holmesii ATCC 51541]
MSDIQLNSLKPAEGSKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRRLPKRGFTPLGQHLYAEV
RLSDLQRLDVEEVDVQALKAAGVVGQGVRYAKVIKSGELSRKVVLRGITATAGARAAVEAAGGSLA
>AHV92485.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MVVTLLALLVPALALISADGGPAILYLTSFLGLCAWGVNAFTRREPFDFRSLAAVAVALMSPLGAMLITNSVHGAWSSSE
QEKLLRFALCVPIAWMLLRAGGNGYAMCSGP
>AHV92486.1 hypothetical protein D560_3669 [Bordetella holmesii ATCC 51541]
MSALLSAPLLALCLTGIASATVHTDVLGNIQGLKLADETTVPTLRERIVQAGLDKIGTPYSWGGDDPVDGFDCSGLALFV
FRETAGIDLPRTSRAQRQAGDNVNRRQLRPGDLVFFATSRRGVTSHVGIYIGQNQFVHAPSRGAKVRVDKLSNSYWSKRY
VGARSYLESNPSQLLAQNAN
>AHV92487.1 disulfide bond formation DsbB family protein [Bordetella holmesii ATCC 51541]
MGGGLCAVLAACGVAAAWYQYSVAAKMLSCDQTFADRFITATGLDGALPSVFGIYATCMDAVVSLLGLEYAIWSLALFVV
LFFMAVPTLRNRS
>AHV92488.1 3-methyl-2-oxobutanoate hydroxymethyltransferase [Bordetella holmesii ATCC 51541]
MDVVLVGDSLGMVCQGRDSTVPVTMDDMVYHTQAVARGLSAVGAASLLLSDMPFGSYHGGPDDALRHAVRLMQAGAHMVK
LEGGGWTAPLVRFLVERGVPVCAHLGLTPQTVHALSGYRVQGRDEQGAALLERHSRELADAGATMLVLEMVPAALSARIT
AALPACHTIGIGAGSGTAGQVLVMHDMLGASLGKTPRFVKNFLAGNAGVREAFEAYAQAVRAGRFPEDSVHAW
>AHV92489.1 hypothetical protein D560_2757 [Bordetella holmesii ATCC 51541]
MTRLLRLYLLYLGVALTLLLLSDTNANLGQPAAIEFQYQQF
>AHV92490.1 hypothetical protein D560_1828 [Bordetella holmesii ATCC 51541]
MELSWLCKRKPRKQKSMTNVEKTTHADIAEILPRYKQFR
>AHV92491.1 dihydrodipicolinate synthase [Bordetella holmesii ATCC 51541]
MASSALTADITFKGSMVALVTPMQPDGSLDYTAYRALIDWHVQEGTNALVVVGTTGESPTVSMDEHAELIRVAVEHAAGR
IPVVAGVGANSTDEAIHLARHAKAVGAQAGLSVVPYYNKPTQEGIYQHFRAIQEAVDLPTILYNVPGRTVADMSNETVLR
LAQVPGVIGIKDATGDIARGALLLREVPAQFQIFSGDDPTAAALMLLGAQGNISVTANVAPKLMSQLCAAAQAGDVPRVR
ELNAHLARLNKALFVEANPIPVKWALAQMGRSALGYRLPLVELGAAHHDTVRRALQEVGLL
>AHV92492.1 export membrane family protein [Bordetella holmesii ATCC 51541]
MIRALIKRPIASIFLGLALILVGLTAWRLLPVAPLPQVNFPTIEVRAELPGASPESIASTVAAPLERALGSIPGVTAISS
SSNQGATRVLLQFALDRDINAAARDVQAAINASQSDLPAGMPGSPTYRKVNPSQAPIMALALSSPTRSAGALYDIGASIL
AQRLAQVSGVGEITLGGSSLPAVRVQINPNLAAHYGLALDDVRNAIDRAATLGPQGTVETSDQRWEVATPSQPRTARDFE
TLILRHRDGAVTRLGQIARVSDSVEDRYSSGFHNEHPAVVLTISRQPGANILDTIATIDATLPALRALMPADVALTVVLD
RSAGIKATLKEAHITLGLATLLVILVVWGFLGDWRAAAIPSLAIPISLIATFAVMYLAGFSQNNLSLMALIVAAGLVVDD
AIVVLENIRRHMEAGLSPRRAALRGASEVRFTLVAMTLALTVVFASILFMGGLVERLFREFSVTLIAATLISLGVAGIII
PSLCAAWLKPAPPRTGPSLFGKLQHAYGTSLWRILRHPRLTMTALAAIIGLNILLYAQAPKGFLPT
>AHV92493.1 phage integrase family protein [Bordetella holmesii ATCC 51541]
MLTDTALRNLKPKSKIYKVFDRDGMYVAVSTAGTITFRYDYRLNGRRETLTLGRYGPAGMSLAMERERLLDAKRSVDQGL
SPALEKQRAKRRLTAAKTFGQMTERWLADARMADSTRAMRKHIIDRDILPVFQNRKLKEVTPDDLRALYNKVKARGAPAT
AIHVRDIVKQVYAFAILHGERLTNPADDVKAASIATFVPKDRALSPAEIRLAFHQLETIAAYPTIRLALRLILLTMVRKS
ELVEATWSEVDFENATWTIPKVRMKGRTPHVVYLSRQAMDIFVALHTCAAGSRFVLPSRYDPDRCMSHATLNRVTQLIGS
RAKEAELPLEPFTVHDLRRTASTLLNEVGFNADWIEKCLAHEEDSGRRGRSTTRPSTPGRGGTCSRSGPTWWRRGSMGAR
MCRSWCRRT
>AHV92494.1 S-adenosyl-L-methionine-dependent methyltransferase family protein [Bordetella holmesii ATCC 51541]
MRSTRPSSLPALDAEASAHSALVVDHLRQHIATLGGWLSFDHWMALALYAPGLGYYTAGSVKLASNAGHAREPGGDFVTA
PELTPLYAYTLARQAAQWLQATGTSRILEFGAGSGALAEGVLAELDRLGIQVEYAIVEVSADLRARQQRRLAPRGARVQW
LDHLPDSFEGVVLANEVLDAMPVRLFHFAEDGQVLERGVGWQQGFVWQDRPADPALARTLAARLPALPGYVSEINLQGEA
WVREMGHWLKRGAALLVDYGFPQREYYHPQRAGGTLMCHLRHHAHADPFVAPGMQDITAHVDFTAMADAALDAGLQVLGY
TSQARFLMNAGLLDLLGRLDPTDSRAYAQATAPVQKLLSEAEMGELFKVLAIGRDVPAGSIGFARGDRRDTL
>AHV92495.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MKALAGIPVIGPVLAGLTPMTLGALIAVPLIAWLLNRTPLGLALRMVGENPAAAEGQGLSVIKLRMGAIVAGSALMGVAG
SFLTLAAFNAFFFNMINGRGWICVALVVFASWRPGKALLGALVFAFFDALQLRLQQGALPGLPALPYQVYLMLPYLLSIL
ALVIVARRAAYPQALMKPYRKGER
>AHV92496.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MPDILLRGRDITRRFGGLVAVNAVSLDLPRGTVHAVIGTNGAGKSTLINILSGELAASSGSVALGSNDVSAWSQPRRAQA
GLGRTYQRSTIFPSLSVFENCRLAAQTRRQRFWHWTAKAAGCAHSAAHADAALARTGLRQAADRPAGLLPHGHKRQLEIA
MCLAGLPTVLLLDEPLAGMGPEETERILALLQALKTDHAILLVEHDMDAVFRVADQVTVMVNGTVLASGEPAAVRADPQV
QTAYLGDHA
>AHV92497.1 alpha-methylacyl-CoA racemase [Bordetella holmesii ATCC 51541]
MTAAIPPSSADQPPRKPLEGVRIIDMSRLAPGPYCTMLLADLGAEVIVVGGGRAGNPIATFSRGKHFIKLDLKTEAGQAA
LQRLCQTADVFVESFRPGVCDRLGAGYETLSQQNPGLVYCSVTGYGQDGPLAQEAGHDISYLALTGVLGAIGPADGPPSV
PLNLLADFAAGSFIAALGIVAALFDRTRTGKGQYVDAAMIDGCLSLLAMHWPVWQTPILPARGQGLLAGGAPYYRCYECA
DGKYVSVGALEPQFFINLWRTLFESEPPDHMDMRLWPAIRERFDARFREKTRDQWAGLFAGKEACLMPVLSPEEVWRQPH
IVARHGTANADSVPVIPRFGTRAFPAPPTDTTDRSDQILAQAGLFPEEIAQASPQSERQRIPSRTWPPKMTHTP
>AHV92498.1 nucleoside recognition family protein [Bordetella holmesii ATCC 51541]
MLNKLWLAFFLVAAAAGLVRWIGLGEPDVFRAIVASLFEMARVSVEVMVLLFGTLTLWLGFLRIAEVAGLVGTLARLLGP
LFARLMSDVPRNHPAIGLITLNFAANGLGLDNAATPIGLRAMRELQSLNPRPDTASNAQILFLVLNASSLTLLPVTLFMF
RAQQGSPDPTLVFLPILLATCASTLAGLLAVAVCQRLRLWDPVVLAWLGGSALLLGGFMGLLAGMSASAIAALSSLLGNL
TLFAVLVAFLVVGACKKVPVYESFIAGAKEGFGIARDLLPYLVAMLCAVGVLRASGALDFLLDGIRWLAASAGWDTRFVD
ALPTALVKPFSGSAARAMMLETMAHFGVDSFPALLSAVMQGSTETTFYVLAVYFGSVGIMRARHAVGCALIADLAGVLAS
IGVCYWFFG
>AHV92499.1 putative ribonuclease inhibitor [Bordetella holmesii ATCC 51541]
MCADAADFATENGRVFCYVVEHAGRHPDPEPGVAAAPYGEV
>AHV92500.1 aminotransferase class-V family protein [Bordetella holmesii ATCC 51541]
MSDFIPFALPDIGEEEIQVVADAMRSGWLTTGPNAKAFEQEFAAYLGHGVEAIAVNSATAGLHLALEAIGVGPGDEVITT
THTFTASAEVARYLGAEPVLVDIDPATLCISPAAIERAITPRTRAIIPVHYGGLSCDMDSILDIARRHGLRVIEDAAHSL
PASWQGQRIGTLQSDLTVYSFYATKTLATGEGGMVVTRDPALAKRCRVMRLHGIDRDAFDRFTSEKPAWYYEIVAPGFKY
NLTDMAAAMGRVQLRRVQTMRDRRAGIAAAYDQAFCDLPAILPACPGRTPDVQGQAHRADDEHAWHLYVIRLLPQAGIDR
DSFIVRMTERGIGCSVHYVPLHLQPYWRDRYQLTPEMFPHSQNAFETMVSLPLYSRMSQTQVEKVTRTVRELLGQ
>AHV92501.1 hydroxyacylglutathione hydrolase [Bordetella holmesii ATCC 51541]
MPIEAFTDNYIWAVVHDGCAVVVDPGQAPPVQAFLDRHGLRLRAILLTHHHADHVGGVLQLLAQGPVPVYGPARESLPHC
DFRMQEGDLVDIPELGISLTVLDVPGHTAGHIAYVGHAGKQPLLFCGDTLFAAGCGRLFEGTPEQMHASLRKLATLPEDT
QVFCAHEYTLANLRWATTVEPANPALQLWQEQARQMRADGRPTLPTSIGKERDTNPFLRTQQADVVKAAMAWAGRPLSSS
VDVFAALRDWKNNFK
>AHV92502.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MEWLLDPAAWVGLLTLVILEIVLGIDNLIFIAILADKLPPSQRDRARIVGLSLALVMRLGLLSVMSWLVTLTRPLFSLGP
FSFAGRDLILMLGGFFLLFKGTMELHERLEGGGQEVVGGLRSYPSFWVTVTQIVVLDAVFSLDSVITAVGMVDHLAIMMI
AVIIAMGIMLAASKPLTRFVNAHPTVVVLCLGFLLMIGFSLLAEAFGFKVPKGYLYAAIGFSVLIEALNQVARRNLLKLD
ARRPMRDRTAEAVLRMLGKRPQKVDADLEPDRQAPATAAFGVEERNMVSGVLTLAERSIHSIMTPRIDVSWVNIEDDPQA
IQKQIMDTPHSFFPVCRGSLDEVIGIGRAKDMVADLIAEGQVRRNRLRDPIIVHESIGILRLMETLKRSRGQLVLVADEF
GAIAGLVTPIDVFEAIAGEFPDEDEVPDIIAKDDSVWEIDGAADLRHVEQVLDTEGLIDESEDYSTLAGYLLMRFGQLPQ
PGDSCEYETPYFRFRFEVLRMDGRRIASVRVERSINEALEDPDNYDHD
>AHV92503.1 aminotransferase class IV family protein [Bordetella holmesii ATCC 51541]
MAPELIETLLVTADRSLPLLGRHLTRLAAAAQALGYHCDQAAIERDLLTAAHAPAGLEPYRMRLLLERSGHYDIQTAPLP
PLPLVQEILLAPEPLDSREPLLRYKTTFRPWYAKAADWLPAHPQIFDMVFLNEKGQLCEGSRSNLYLQLQGQWYTPPVEC
GLLPGVQRAELLETGQVRERVLDVDDLRRADGLRLSNALRGWIDVTLHDY
>AHV92504.1 hypothetical protein D560_1188 [Bordetella holmesii ATCC 51541]
MGQAASTAGRYLGQTLRLMVGVPDYQNYVDHMRRTHPDQEPMTYEAFFRERQSAHYGGGKRIACC
>AHV92505.1 hypothetical protein D560_0892 [Bordetella holmesii ATCC 51541]
MLLAAARRKTRQRGHTCGLRRPKLSAAAPSARVLQSFPA
>AHV92506.1 methylmalonate-semialdehyde dehydrogenase [Bordetella holmesii ATCC 51541]
MNTITHYINGQPYAGRSGRYTEGYNPATGDIINSIALASADDVGTAVEAAKAAYPAWAETPALKRARILFNFKALLDKHQ
DELAALITREHGKVFSDAKGEVTRGIEVVEFACGIPQLLKGQYSDQIGGGIDNWSMRQPLGVVAGITPFNFPMMVPCWMF
PVALACGNTFILKPSERDPSVPLRLAELLKEAGLPDGVFNVVQGDKIAVDALIAHPDVEALSFVGSTPIAEYIYAEGTRR
GKRVQALGGAKNHLVVMPDADLDQVTDALMGAAYGSAGERCMAISVAVAVGDVADKVIERLKPRVAALIVKDGMQADAEM
GPLVTAQHRKKVLGYIEDGIAAGATLVADGRDLKVTGNEQGFFLGGTLFDHVTPQMNVYREEIFGPVLCVVRVPDFASAV
ELINGHEFGNGVSCFTSDGGIARAFARQIKVGMVGINVPIPVPMAWHSFGGWKRSLFGDHHAYGEEGVRFYSRYKSVMQR
WPDSIAKGAEFTMPVAK
>AHV92507.1 haloacid dehalogenase-like hydrolase family protein [Bordetella holmesii ATCC 51541]
MSDVIALVFDFDDTLAPDSTTGFLESIGVDTAAFWKDSVDPLLSQQDWDPVPAYLYRMIELSRQGKHGPITREQLQQWGA
RLPLHKGVPTLFERLRQAVRSTHPRIQLEFYLISSGIGDIVRSTPIAAEFTDIWASEFIYDEAGGICFPRRIVSFTDKTR
YLFHIQKGLVGPEFRNRPFEVNRKVSEDRLRVPLDQMVFVGDGYTDIPCFSLIRRAGGYAFGVWDPSHRDKRSRAWGFVE
QGRVSNLNFARYDEEAEPYQLLEAALIGLAGSVSLKSRAYGG
>AHV92508.1 DEAD/DEAH box helicase family protein [Bordetella holmesii ATCC 51541]
MLDLDISEFFAADGPLAKAMPGYRPRHAQVELAQAIESAMVDRATLVAEAGTGTGKTWAYLVPAIVQGGKVLVSTGTRTL
QDQLFARDLPKVRAALAAPVTVALLKGRGNYLCHYHLDRLQGDERALKSRTEIAQLRQIQVFSGITKTGDRADLAQIPED
ADIWQRVTSTRENCLGQDCPRIRDCFVVKARRQAQEADIVVVNHALFMADLVLREEGVTDLLPEVDTVIFDEAHQLPDTA
TRFLGSSVSTHQLLDFSRALEAAGLAYAREAAKWSDVSRLVETAARELRLVCAGLERMPGRKATFDAMPEPEVFDAALAQ
LRGVLDAATRALVQVSEKHPDLASAARQGADLCVKLTRWATPPRSGGDEAGWGEDASAPVSDDMAQLAQNAPSWSGPAVR
WVEQGQHHVRLHAAPLSVAQAFSRYRKSNQAWVLTSATLSVQGDFGHFTRQLGLSDARTGRWDSPFDYPSQGLLFVPRDM
PEPQAPQFAQRFVDSLLPLLEVNPGGALILCTTLRAVDRMAELLAEAFEDAGHDWPLLKQGQSTRRDLLEKFARLKHPVL
VGSASFWEGIDLPGDMLTLVAIDKLPFAPPDDPVIEARLRACRAQGGNPFAEYQLPEAAISLKQGAGRLIRTETDWGALM
VGDPRLVEKPYGKRLWRGLPPFARTREIGEALAFYGRHVGED
>AHV92509.1 succinyldiaminopimelate transaminase [Bordetella holmesii ATCC 51541]
MNPRLDALHPYPFEKLRALLAEAGAPPQGLTPINLSIGEPKHAAPARVGQAICDNLQGLSVYPSTKGEPALRQAISQWLS
QRYSILAPDIEREVLPVLGSREALFAFTQTVVDPTADALVVCPNPFYQIYEGAAVLAGATPYFVNADPARDFGCDWARVP
EDVWKRTQLVFVCSPGNPAGNVMSLQDWEVLFALSDRHGFAIASDECYSEIYFDEAPLGSLQAARRLGRDDYRNVVAFSS
LSKRSNVPGMRSGFVAGDARLINRFLLYRTYHGSAMSPTIAAASVAAWGDEAHVVENRHEYRAKFEAVLPILQRVMDVRR
PQAAFYLWAPTPGSDTAFARDLYARTGVTVLPGSFLARQAHGVNPGAGRVRIALVAPLAQCIEAAERIVHFIKTSV
>AHV92510.1 hypothetical protein D560_0620 [Bordetella holmesii ATCC 51541]
MNRFFAMYVGFIDPESMFSLTMSVQVVLVTILGGVGTLVGPWLGAALLLPLSEGTRVAWGSSGLGLDLLIFGLAILLVTL
FLPGGLVTLRRRRGTT
>AHV92511.1 hypothetical protein D560_1883 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRS
>AHV92512.1 prpF family protein [Bordetella holmesii ATCC 51541]
MDTQDKNQTQQAVDCLFMRGGTSRGPFFRAADLPTDLISRDALLLAIMGSPDTRQIDGLGGAHPLTSKVGIVGPGREPGV
DLEFLFAQVAVDQARVDTTPNCGNMLAAVVPFALETGLVAARGECSSYRVLTLNTGMLCDIEVQTPGGQLRYDGTARIDG
VPGTAAPIAINFLDTAGSVCDSLLPTGHALDRLRVPGQADIDVTCIDNGMPMVLMRASDLQRRGDESVAELNADEALKVR
LEALRLAAAERMGLGDVRDKPYPKMCLLSPPLRGGSIATRCFIPHVCHDAIGVLAAVTVATACVLPGSVADGLARLPGGT
KQCLPVEHPSGEFSVELELDASGQVSRAALLRTARLLMRGTAYAPRMVSSGESA
>AHV92513.1 bacterial type II and III secretion system family protein [Bordetella holmesii ATCC 51541]
MRAVFFRLPVLACCLSLSGCALQAQWQSLREMLGRSRDEVQALHEAQARATNAEAARSLREAAQDVGKPWLAGPAQALAR
EVALPAPLRARVDTTLIFAERAGLAVIAERLHRATGIAVRVLPEALLPPELFLPRLADNAALVIPAQPQVELHEGPKPLA
DILDALAARLLVWWRYRDGAIEFYRSQTQAFDLRMLPLSVQSQAQLGRRVAEAEGFDNAIQASVEVKLPSPTQMLRAQIE
PFLSRSGVASLAGTEATLVVTDTPAVLARIEAFIAQQNARAGRRVRLLFEEITLLMHNSAEGAIDWRVLHASARAALEGV
FPSVARTISPGLSAGLPQGPWGGSKALLSALAQFGAVRHHRSIPLLTLNRRPVTYAVHSTFSYIDQVQSLQAGPGKSELP
AVSINQKRVTVGTFLTLLPDAQDDGSILLSIGYDNTSAQPLKTLAFGDDDLPLQLQQLNLDGNGSVQQVRVRPGQAVLLS
GFDRSVDSYDRQRLTPDAPLVVGGKDQARQERLLTVIVLSAQLEEADG
>AHV92514.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MQALWMLLASAMFAIMGSFVKLSAEHGASLAQVVLFRGLPSIVLLLIWARAARQSIVPTSWRLHFWRNLSGVTSMWLGFY
ALSHLPLATATSLNYTAPLFIACWMLGWGGAQRDTIRIVAVALGFLGVIAVLRPSINDDQWLAAMLGLSAGALSAIAMMQ
IRQLGRVGEPEWRTVLFFSVAVCVSSVVGLAWQGWGTADMTGYAALVGVGTAGLFGQLAMTRAFGHGAALLTAALQYSTI
IFAALIGVGFWGDMLDGLAWAGMVLIIAAGLLSVWRTMRDSARN
>AHV92515.1 hypothetical protein D560_1550 [Bordetella holmesii ATCC 51541]
MSRQASGGLTAQWLAESLRLREEHWGPLEDHDEARRARLTEGDFSARVLERARLLASREHLDDVLLRWRQGAVFALLILL
VIVLASGAGVAYGALGDGSRPVNVLWALGALLGLHGLMFLLWLASFLLPAGRATGLGRLWLWITRKLARGPDSALIPQAL
LNLLARSGALRWLLGTVSHLLWLAALCSALGALIVILSTASYRFIWATTLLGPEAFVRLTAWAGWLPAQLGFSLPHPDIV
RASDGQQVLPAAAQVQWSVWLIGMVVCWGIVPRLLAALLCLTMSARALAKLRIDPELAGYAALRDRLTPAAQASGMDRPA
DPLRTPRITHTAAIGGRPVYASLELPAEQNRPVPATETVFDAGNLDTREQRNALLDALAASPASRLLLACDAHQTPDRGS
LALIASLSAHAGQTRIWLLGAGERLAQWRTRLQDAGLPAAAILDAQEPALQWLERGSND
>AHV92516.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MGGSVGFNYRLPGQEGGGAGIENLCIAEGRVEECEIRPGITLIVSDVHVYHHYESTSVMTPRFSAIVVLQGQARARLDKQ
DDVRLAAQSGLNALYGDTVAMTGVHPAGQRLRSVNLSVTAPEAADDEYTSEIIWKLMQSSAPRLRRWPVPHHLLLSIEHL
LECDWDQPLRNMVREGVGTQLLAHALAALQHAPVTHRGLTQRDRQLLERVRERLHEAPGEDHTLDDLARLACMSPSTLRA
KFHAVYHRSVFSWLRERRLEVAREQLARGWSVQQAAHFVGYRHATNFATAFRERYGVAPSQLG
>AHV92517.1 hypothetical protein D560_3866 [Bordetella holmesii ATCC 51541]
MFARYDALRRQLPDDEAASLANDQDKWQGYIEADCAVYADMAGRDNDAWRLTWGEVALASCRADMIAAREDRLRQYQALI
ARRSAQRASILAP
>AHV92518.1 lemA family protein [Bordetella holmesii ATCC 51541]
MRLLAWTWLMSMTVLLSGCGYNNMQAADEQVKAAWSEVLNQYQRRADLVPQLVKVADAYMTHEREVLTQVTEARSKVGSV
QITADQLEDPAAVQRFQQAQSALTSSLSRLIAVSENYPQLKADGIFRDLQAQLEGTENRIAVARGRYVQSVQAYNVLVRQ
FPGVITAKIFGYAPKANFGVDNEAAIAKPPEVKFSNESRKP
>AHV92519.1 na+/H+ ion antiporter subunit [Bordetella holmesii ATCC 51541]
MREIIGKTLLPLGIFLLWLVLNESLSWGQAAVGAALAVWLGWASTRLRPLQARPRRFYLLPGLFCRVLLDIIRSNWAVTQ
LIWRPHSDMSPGFMHIPLTMRDPHGLAMLVCILTYTPGTVVVEISDDQDLTLHVLDLQNEEEWVALVKGRYERTLMEVFE
>AHV92520.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MIDLRNIETFFWVATLGGFRAAAEKLNATQPAISQRIASLEADLKVRLFERDTRGIRLTAKGQELLSHAERMLQMRHDMQ
AAAVAKNVMSGTLRLGVSETLVHTWLPRFMEGLHDVYPALMVEIQVDTTTALEAQLVSHQIDLAFLLGPLKDERADNLFL
CDYPLSWLASPKLKVGRQPVALKHLAQWPIITYSATTEPHRAVRHALQEAGVKAPRMYGSSALSVIVRMAMDGIGTAVIA
PIFLREALNQGELRLLQVKARDLPPLHHTASWMRGPDSHVPEVLARMAQEIAHADSQRRASVFP
>AHV92521.1 phosphopyruvate hydratase [Bordetella holmesii ATCC 51541]
MSAIVDIIGREILDSRGNPTVECDVLLESGVMGRAAVPSGASTGAREAIELRDGDKSRYLGKGVLRAVENLNTEISEALM
GLDAQEQTFVDRTLIELDGTDSKERLGANAILAASMAVARAAADESGLSLYRYFGGSGPMSMPVPMMNVINGGAHANNTL
DLQEFMILPVGAASFREAMRWGAEVFHMLKKLIHGQGMSTAVGDEGGFAPNVANHEAAIQLILKAITEAGYEPGTQIALG
LDCASSEFFRDGKYTLAGEGGVSLSSQEFANLLATWCDKYPIISIEDGMAENDWDGWKLLTDQLGKKVQLVGDDLFVTNT
RILREGIQKGVANSILIKINQIGTLTETFAAIEMAKRAGYTAVVSHRSGETEDSTIADIAVATNAMQIKTGSLSRSDRMA
KYNQLLRIEEELAEVASYPGIEAFYNLR
>AHV92522.1 hypothetical protein D560_3698 [Bordetella holmesii ATCC 51541]
MDCACLLRQPARADLGPAKSGTSHHRRRPDLLPVISTKSM
>AHV92523.1 tripartite ATP-independent periplasmic transporter, DctQ family [Bordetella holmesii ATCC 51541]
MHLLCTAERGLFKLVSTIAQLLLLASAACAFYQVIARFVLHSPSDWSEVATRALLIWTVLLGVALAFRHGVMISVELLRN
TLKGRARRMLEHAIALICMAFMIVLAWVGGQMTWRVRFQTVPSLDISISWIYLAIPVGATLATLAILARWARNEEDDVPV
RNDAQG
>AHV92524.1 dimethylhistidine N-methyltransferase [Bordetella holmesii ATCC 51541]
MFSAITLLPEYYPTRCEAEILSEHGAAIAQRAGTVRTLIDLGAGDCAKAEKLLPALQPQCYMPVDISVDYLRQAVQRLKR
SHPRLDILPIEQDFAAGLTLPPLTAREGRLIFFPGSSIGNLDRPQALGLLRSMARLGAQALIGVDRVKPRDILEQAYDDA
LHLTAAFNLNLLRHVNHILHSNFDARDWEHMARYDASRQRVEMHLRALHDVKVEWPGERRQFNTGETIHTESSYKYTTEG
FEALLHEAGFHDVQHWSDARDWFTVYHARS
>AHV92525.1 ribosomal L16p/L10e family protein [Bordetella holmesii ATCC 51541]
MGNGKGNPEYWVAEIQPGKVLYEMEGVSEELAREAFRLAAAKLPISTTFVARHIGA
>AHV92526.1 fe(3+)-pyochelin receptor [Bordetella holmesii ATCC 51541]
MSNSKEKPGLRQAAACLASAMALPVAAQDVVLMQAVSVNAPSAQTVSLGKQSLTLQEIPQSVSVIGQDQMREQNLQTLDE
VMQHATGITVQPYQLLTTAYYAHGFKVDSFEQDGVPVLMGNTAASPQDMAVYERVEILRGANGLMHGSGNLAATVNLVRK
RAQREFAFNGSLQAGSWDHYRAEADIGGPLNDAGNVRGRMVAAYEDRGYFFDVADQQSTLFYGVGEIDLGAATVLTAGVQ
YQHIRSTTNMAGVPRYSDGGDIGLSRSTFLDVDWDRFNWDTTRWFADVEHQFASGWRGKVSLNYLRSDSHLKYAGAYGAI
DRKTGLGSRLMGGAYKFDNSQTSVDAYLSGPLTLFGREHEVVLGGNVQRVTTEQYTAAFSPALNVPVNVFDWDPHSVAEP
ATGTYRSPGETRVKQQGVYAMGRFSLADPLTLVLGGRMSWWNQSAPTAGQRIDPEFTPYGGLVFDLDSRWSVYASYAEVF
QPQSELTLDGQPLDPIRGSSYEAGVKGDLDGLNLSVALFQIDQKNRAQQDPQWPCVGNACYYIAGGKVRSRGLELEASGR
IQPNWTVTAGYTYNTSKYLEDAVSAGQPFARFTPKHILRLWTQYTPAVWEGRLSVGGGLRMQSNFSTVSAGTTLRQGGYT
LVDARLGWRVNKHLTASVNLNNLFDRRYYQSLSSTSWNNRYGEPRNVMLTLRAEY
>AHV92527.1 50S ribosome-binding GTPase family protein [Bordetella holmesii ATCC 51541]
MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLGKLADIVNPERVLPATVEFVDIAGLVAGA
SQGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVDPIADIEVIETELGLADLQTAEKALHRHSKTARSGDKEAQR
LVSVLEKCIAHLNEAKPVRSMGLSDDDLALIKPLCFITAKRAMYVGNVSDDGFTDNPLLDRLTEFATKRNAPVVAICAAI
ESEIVDLADEDRQAFLSDMGMDEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTVPIGATAPQAAGVIHTDFERGFIRAQ
TIAYDDYIACKGEQGAKEAGKMRAEGKEYIVQDGDVMNFLFNV
>AHV92528.1 rhodanese-like domain protein [Bordetella holmesii ATCC 51541]
MDFLQFLLDKNNIFIVVVALASGAMLLVSGLRKGRGGSAVDTTTAIQMVNHQNAVWVDVRAAEQFQAGHIAQARSVPADD
LEKKAAALPKNKPLILVCEQGRTSPRIAQRLKALGLTDVKTLDGGMRAWYAANLPVTQKG
>AHV92529.1 NAD(P)H quinone oxidoreductase, PIG3 family protein [Bordetella holmesii ATCC 51541]
MRAVEISQPGGPEVLVPAQRPTPEPGAGEVLIKVTAAGINRPDVFQRMGNYAPPPGSSDLPGLEVAGEIVGGDAAAGGFK
VGDKVCALLAGGGYAEYCVAPALQCLPIPKGLSDVEAAGLPETYFTVWSNVFDRGALSAGETLLVHGGASGIGTTAIQIA
CALGHTVYATVGSDERVAAVERLGAKGINYKTQDFVQEIKTLTGGKGVDVVLDMVAGDYIGRDLSCLADDGRVVIIAQLG
GSKATINTADLMRRRLTVTGSTLRPRPVAFKGAIAQALRQRVWPLLEQGAIKPIIHATLPLEQAAKGHAMMEAGEQVGKI
ILTV
>AHV92530.1 translation elongation factor G [Bordetella holmesii ATCC 51541]
MTRRTPIELYRNIGISAHIDAGKTTTTERILFYTGITHKLGEVHEGAAVMDWMEQEQERGITITSAATTAFWRGMAGNYP
EHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQPQSETVWRQANKYRVPRIAFVNKMDRVGADFLRVQRQIVE
RLKGDAVPVQLPLGAEDHFRGVIDLVKMKCILWDDSSQGVRFEYADIPADMLAEALRWRDKLIEKAAEANEVLLEKYLSG
ETLTEAEIKAGLRQRTVANEIVPMLCGSAFKNKGVQAMLDAVIDYLPSPLDVPAIKGHDERDHEIERHPSDKDPFSALAF
KIMTDPFVGQLVFFRAYSGVVKSGDSVFNPLKSKKERLGRILQMHANERKEISEVYAGDIAAAVGLKDVTTGDTLTDPGH
VIALERMILPEPVISQAVEPKTKADQEKMSLALNRLAQEDPSFRVRTDEESGQTIISGMGELHLEILVDRMRREFGVEAT
VGKPQVAYRETVRKKVEGVEGKFVKQSGGRGQYGHAVISVEPQPAGKGFEFVDAIKGGVIPREFIPAVERGIVDTLNTGV
LAGYPVVDVKVTLTFGSYHDVDSNENAFRMAGSMAFKEGMRRADPVLLEPMMQVEVETPEDFTGNVMGDLSSRRGMVQGM
EDIAGGGGKLVRAEVPLAEMFGYSTSLRSLTQGRATYSMEFKHYAEAPRQVAEQVIAARAGGRG
>AHV92531.1 aspartyl/Asparaginyl beta-hydroxylase family protein [Bordetella holmesii ATCC 51541]
MKWFILALFVVTAVVVHYRGRVRHRFSRQALDHSTFTAPINVFMYAFSGVPNQPYLDLKYFPQIKVLIDRWEDIRAEAEQ
LFGDGHIKASDKYNDAGFNSFFKSGWKRFYLKWYDTDHPSARALCPLTTELVSTIPGMKAAMFTALPPGSRLPRHRDPYA
GSLRFHMGLITPNSPDCYINVDGQDYYWRDGEAVVFDETFIHYAENKTDQNRIILFCDIERPMKYRWAQAVNNFFGTILL
RAATSPNQEGDRTGGINRIFGAVYAVRRFGKSIKKKNKTVYYILKWMLVLGIFALIFL
>AHV92532.1 acetate--CoA ligase [Bordetella holmesii ATCC 51541]
MSNAIQSVLVETRVFPPPERAVKGATISGMDAYRALAEEAERDPDGFWGRHARENLQWTKPFTEVLDESDAPFYRWFGDG
ELNVSANCLDVHLTNGNADKTAIIFESDDGKVEKVSYRELLGRVCRFANGLTSLGYKKGDRAIIYMPMSVEAVVAMQACA
RLGVTHSVVFGGFSAKSLQERIVDVGASLVITADEQVRGGKVIPLKPAVEEAIAMGGCEAVTKVIVYRRTGGEVAWTEGR
DLWMHDVQAGQSDMCEPVPVNAEHPLFILYTSGSTGKPKGVQHASAGYLLWALLTVKWTFDARADDVYWCTADVGWITGH
TYISYGPLAAGLTQVVFEGVPTFPNAGRFWEMVQRHKVSVFYTAPTAIRSLIKAAEATPQTHPRNFDLDSLRIIGTVGEP
INPEAWIWYHKNVGRERCPIVDTWWQTETGGHMITPLPGATPLKPGSCTLPLPGIAAAIVDETGGDVEPGNGGFLVIKRP
WPAMIRTIWGDPERFKKSYFPAELRGYYLAGDGAQRDADGYFWIMGRIDDVLNVSGHRLGTMEVESALVAHELVAEAAVV
GRPDDTTGEAVVAFVVLKSARPEGEEAQAIAKQLRDWVAREIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRVVAKGEEVT
QDVSTLENPAILEQLSKPL
>AHV92533.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MGLPWVLKFLWASQVDNRWSPAWGRRRSWILPMQLLALGCLLILAMVGTDDAALGILLLGLASLASATQDIATDGLTAEH
FSSDDLARANAIQVGGTMVGFFLGGPGCLTLGAYVGSRGAVLGLAGLVGFSLLMVSLWREPPVKLARQDRACLRGFLRRP
GAWPLVWAAGLSAMAVAAPYGLAKLMLVDAGWAPEAIGRLGLAGGAVTLLLGCGGGAWLAERIGPRNALGLGLLASAAAA
TAWIALAAGEPGPLGAFLAQALASFGAGAASVGLMTLAMRFAQDGRQAGTDMTAVQSARDLGEVMASAGMTALAAQLGYS
VSFGVSLGGALLVLILLLLTFTPGRAKPVA
>AHV92534.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MQLHPEKLPVRTDFVDTVYRVLLDAITDGSLAPGERITQEEIAEQLHVSRSPVLQALRLLKKDGFIEDAPGRGVQVTQLD
PAWVAHLYEVRGALDALAARLAAQARAVIDPTLIERGRIAARSADLKTNIESDLAFHNAIYDASGNPLIGESARHYWVHL
RRVMGAVHRSAAHRSTLWDEHAAIAQAIASGDARLAVRLSDQHIEHARSNLVGQLQDILDR
>AHV92535.1 TOBE domain protein [Bordetella holmesii ATCC 51541]
MTTADRMAVLDRGVVQQIGTPTTLFDYPVNRFVADFVGTMNVLEGQVRERRSDSVLLAVEGVGELHLPVTGDIPDSARLA
ASFRPHTVQIEMADGTGDARYVWLPAVVEASEFLGEFTRYQLSVGEQRLTADQTHMAGLSPFPIGAPVSVGLEPTQIRLL
AT
>AHV92536.1 phosphoribosylglycinamide synthetase, N domain protein [Bordetella holmesii ATCC 51541]
MAPGNGGTQTGDQLENIALTQPEELADFVQREGVSLTVVGPEAPWLPAWWTYSVRAA
>AHV92537.1 septum formation topological specificity factor MinE family protein [Bordetella holmesii ATCC 51541]
MQQELVAVISKYVKINPDDIKVNLERQDTLEVLEVKIEMPQSETQASA
>AHV92538.1 marC integral membrane family protein [Bordetella holmesii ATCC 51541]
MGNFVSEILFGYTTLISIINPLGLAFVFLNKTATLTPEERARLAYSVALNAMFLLLVTFFIGAYILHLFGISLEALRVAG
GLSVAVSGWAMLNAPEPHPQAQALQQITPSMAREMVFLPLTMPLTTGPGTVAATIALSANRTNELRDFLLASLASVLITM
AVAATLARYLGADGTRIVTRVSAFLLLCVGVQIMLTGLEQFLRPIIGHG
>AHV92539.1 queuine tRNA-ribosyltransferase [Bordetella holmesii ATCC 51541]
MTGLSFELLATDGGARRGRMTLNHGVVETPIFMPVGTYGSVKAMLPHELKEIGSQIVLGNTFHLWLRPGTAIMEKHGGLH
GFMQWDKPILTDSGGFQVFSLQGMRKITEEGVKFASPIDGSRLFLTPEESMRIQRSLNSDIVMVFDECTPYEIDGRPATQ
EEAARSMRMSLRWARRSRDEFDRLENPNALFGIVQGGMYENLRDESLAGLTDVGFHGYAIGGLSVGEPKEDMMRILGHVA
PRLPQHAPRYLMGVGTPEDLVEGVSRGVDMFDCVMPTRNARNGWLFTRFGDVKIRNAKYRDDTRPLDPSCACHTCQTFSR
AYLHHLQRANEITGARLNTLHNLHFYLTIMGEMREAIAAGRFQTWRAQFAADRARGVD
>AHV92540.1 peptidase M20/M25/M40 family protein [Bordetella holmesii ATCC 51541]
MNTSISVNGNRLWQSLMELAQIGATPKGGNCRLALTALDGQGRDLVTGWMREAGLGIRVDQVGNIFARRPGLDDTLAPIM
TGSHIDTQPTGGKFDGCYGVLAGLEVMRTLNDHAVQTRAPLEVAI
>AHV92541.1 glutamyl-queuosine tRNA(Asp) synthetase [Bordetella holmesii ATCC 51541]
MHAGSLVAALASWLDARAHQGRWLLRIEDVDKPRAIPGADAIIMQQLRDLGLHWQGEVLWQSRRDTVYQAAFDCLRRAGQ
VYGCGCTRREIADSALRGAAGVDGERPYPGTCRHGLAPGRQARAWRLRVPAGVEHFEDRWLGPQSQDVALAVGDFVLKRA
DGLWAYQLAVVVDDGQQGVTDIVRGADLLGSTARQRLLARLLGLPAPRVMHLPLVIDPQSGLKLSKQNHAPALDTRDALG
CLTRAWRELGFDPLPARDRDDFLARATGAWGARFGRT
>AHV92542.1 flavin reductase like domain protein [Bordetella holmesii ATCC 51541]
MLRFLSQHAGDPQWEADFSAMVDYAAQHGWVNERGDIRAHMIVNERDEVVSIDDFKAAMRALPAGISAISTGDGQQVAGM
IVSSLTSISAEPPMVGFFVQQTSSARDALVRNGRFVANVLGEDHDDVIQAFLRQPQGEARFASGGWAMTEQGLPVLGDAL
ASIECDIVCTEVLGTHDLIVGKIRKTTCRPAQPVINFNSATHRLSRLQ
>AHV92543.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAQHMVRERGISVRLACEVVGISQTCYRYVCKRSTENDEIADWLMRLTDSHRSWGFGLCYLYLRNVKGYSWNHKRIYRIH
RDLELNLRIKPRKRLVRQAPEPLTVPNQLNHVWSMDFMHDQLTDGRSIRLFNVIDDFNREALGIEIDFSLPSERVIRSLK
QIIGWRGKPLAIRCDNGPEYLSDAITKWAGQWGIKLEYIQPGKPQQNAYVERFNRTVRYEWLSQYHWEDLDHVQRAATEW
MWSYNHERPNMALGGYTPKQRLAMAA
>AHV92544.1 DNA topoisomerase IV, B subunit [Bordetella holmesii ATCC 51541]
MATPRYTEASIRVLKGLEPVRQRPGMYTRTENPLHIVQEVIDNAADEALAGHGKQIQVTLHADGSISVEDDGRGIPVGMH
PEENAPVVELVFTRLHAGGKFDKQGGGAYAFSGGLHGVGVSVTNALAKRLEVVVWREGGVHRLVFAGGDVVEAIAPYPEG
GRKKSGTRVRVWPDPKYFDSPNIPMGELTHLLRSKAVLLSGVKVVLVNEKSGDSKTWHYQDGLRGYLSEALAGAELMVPF
FEGEQYAGSDHESFAEGEGAQWVVAWSEDGNVVRESYVNLIPTPAGGTHESGLREGLFGAVKSFAELHSLLPKGVKLLPE
DVFARASFVLSAKVLDPQFQGQIKERLNSRDAVRLVGGFAKGALDLWLHSNVEYGKKLAELAIRQAQARVRSAQKVEKRK
SSGVAVLPGKLTDCEASDASRTEVFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNSWEVDRDRLFANNEIHDISVAIGV
DPHGPNDHPDLSGLRYGRICILSDADVDGSHIQVLLLTLFFKHFPRLVEAGHVYVARPPLFRLDVPAQGKRPARKIYCLD
DGELEAAQDKLRKEGVREAAWSVSRFKGLGEMNPAQLWETTMNPDTRRLLPVGYGNLSPSDTTRMFDMLMGKGESAQRRT
WIEEKGNLAELDI
>AHV92545.1 asmA family protein [Bordetella holmesii ATCC 51541]
MTTRRKILVAILVVLLALPVVAAVVISNLDWNRFKPTVNEKVSAAIGRPFAIQGDLSVKWER
>AHV92546.1 ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB [Bordetella holmesii ATCC 51541]
MLAAATLTALAACDSGSNNVAPASQEKQSSTQDTLQAAKSAGRIRIGYANEAPYAFMDSQNARVSGESVEVARVVLKRMG
INEVDGVLTEFGSLIPGLQARRFDIIAAGMYVTPERCKQVAFSNPTYGVDEGFLVPKGNPKQLHSFEDVANKPDAKLGVV
VGAIEGDYARDSKVDAGQMVVFPDAVSAFSGVQAERADAYAATALTINDLLNKVQDGGGMERAQPFKNPVIDGKEARGYG
AFAFRKEDKAFADAFNAELAKFLGTEEHAKLVAPFGFTKAELPGDVTAAKLCGTP
>AHV92547.1 putative exported protein [Bordetella holmesii ATCC 51541]
MTAALWAISPAHAAEPSNTPDAVYKREVARCNAGMSAQDRKTCLREAGAARDEAKRNRLSTGSTSHEQNRTRRCDALPAL
QRQDCITQMTDPANTTTRGSVDGGGVMRETVIPVPAGTPGSTMQNNLPPAGTPSGLQPAAAPMR
>AHV92548.1 carbohydrate kinase, FGGY family [Bordetella holmesii ATCC 51541]
MAGGPIPIAGVAGDQQAATFGQGCFAPGMAKNTYGTGCFMLMNVGDKPVASHNHLLSTVGWGLPDGDR
>AHV92549.1 molybdenum cofactor biosynthesis protein A [Bordetella holmesii ATCC 51541]
MRDRRARPLRDLRISVTDRCNFRCTYCMPREIFDANYRFMPHSALLSFEEITRAARIFVRLGVEKIRLTGGEPLLRKDVD
KLIAMLAQLRTPQGQPLDLTLTTNASLLARKAEALKAAGLSRVTVSLDALDPARFARLADSTYTPDDVLHGIDAAARAGL
PVKVNMVVRRGLNDDEILPMARRFRHSGHVLRFIEYMDVGNSNGWNVAEVLPSDELLARLGEQFELQPIDDAPMGRVAER
WRYADGAGEIGVISSVTHAFCGGCTRARLSPEGQLFLCLFASRGHDVRGLLRGLTRDEDVAAALAGVWSVRDDNYSERRG
LATTQREKIEMSYIGG
>AHV92550.1 ribosomal subunit interface protein [Bordetella holmesii ATCC 51541]
MNLSISGRRLDVTPAVREYVMNKLARVLRHFDHVIDTQVMLSVEPLRHKAEITMHLSGKDIHCEAVDENLYAAIDMLVDK
LDRQVIKHKDKVQSHANESVKRQSAAINASQP
>AHV92551.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELRLLRYFIAVAEERHFGRAARRLHISQPPLSYAIRQLEAQLGVTLLERNSRHVDLTPAGQVLYGQALALLRQSEEISL
LVQRVDAGLQGRCRIGFVGSMLYRGLPDVLAQLRLQLPGVEQVLQERNSHDQIEAIQRGELDLGFVHANPLPPEVRSLDL
MAEPFVVCLSQGHPLAARRKLELRELVNDDFIFFAREASPSYHETVLSLCVAAGFHPAVRHEVRHWLSVCSLVSQGLGVS
IVPACMARSRLAGTRFLNFDHEARSRSQLIWPARHSSPLAERTLAIVREHFGGMA
>AHV92552.1 SMP-30/Gluconolaconase/LRE-like region family protein [Bordetella holmesii ATCC 51541]
MQIDRIGTTRAALGECPVWDEAGQRIWMADCRAGRVLCIDPASGASRQWQLPAPIGSFALNGDDQLVVALKDAFALFDLR
DEHLQIVARLGVSHPNLRLNDGVAMPDGSFVAGTMHIYRKEDEPPLGGLYRLDTRGRLTLLAGELGVVNGPGPDPLGRHF
YVCDSAQRTVFRFRMAADGTLAAREVFVDTDALGSAPDGCCFDAEGGLWTALVHAGAIARFDQQGRLDVRIDLPVRHPAS
LCFGGADLTDIYVTSISDSGRLAADGPMDGALLRVRGSGARGAPRSRSRICL
>AHV92553.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MWCRRSWFANRRRILAALIASVGFCSGAPVGAATWPDKPVRLVVPFPPGGSTDAVGRMLAVGLGKELGQTVIVENKGGAN
GNIGSDAVAKAEPDGYTLLLSGVGSNAINYSLYQSMPYRDKDFAHIALLATGPNVLVANPEFPGHTFADFIRLAKASPDK
YTHASSGSGSSGHLAMEMLKQAADIKLVHVPYKGGAAAITDTIGGRVSVLFLNQDNVLPQVQAGKLRALAVASEKRNPAY
PDIPTIAESGYPGFAAESWFGVSAPAGTPAAVVERLNAATVKAMADPALREKLEKVGFVVVGSSPKAFSDFVTAEIGKWG
KAAKASGARMD
>AHV92554.1 na+/H+ antiporter NhaA [Bordetella holmesii ATCC 51541]
MPHFQLRPKSFLHAFFASEALGGYLLMLAALLALGVANSAWAGSYFSWLSTKLGVHVGPVMLRETVQHWINDGLMAVFFL
LVGLEIKREVLDGQLRGAARIVLPGVAAAGGMLVPALIYLAVNAANPQGLRGWAIPAATDIAFALGILALLGSRVPTSLK
VFLTALAILDDLGAILIIAFFYTAQLNAFALAMAGSLVLCLIILNRLGVLALVPYLALGVLLWFFVLKSGVHATLAGVAL
ALTIPLRRHGAPSPLHKLEHRLHHPVALLIVPIFGFANAGVSFQGLGLDALTAPVPLGIAAGLFLGKQLGVFGFSWLAIR
LGIASLPRQANYRQLYGVALLCGIGFTMSLFIGALAFDSQVTIDATKLGVLTGTLCSAIAGYLLLRSNSPSASGQPRH
>AHV92555.1 putative transmembrane protein [Bordetella holmesii ATCC 51541]
MSESPNPLPGSHPLDLRTLAHVSYGLFALGFLTGGILGVATLAAVVLMYLKRSDTAGTVYASHFDWLLRTFWWSLLWLAI
SFVLTLIYIGWIGMIATVVWVLYRLIRGWLALLEGNPPSSYA
>AHV92556.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MGKILFWFIAILVILTGWRMLNARNSRRAAPPRRRATPPVAKPPETMVRCAHCGIHIPRSEAVLQNGQTWCSVEHARLGP
PR
>AHV92557.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MRFSHLLQSSVLAAALASGAAQAQTVILYSSNNTDTIDTAVDAVKKTMPKLDVRPLTGGTGTLMKRIEAEAQNPRGDLFW
SGGFGTLGAYRAQLEPYTPKDIAAIPAEFRGPDNLWMGTNVHVMAMMVNERQLKGSAAPLTWSDLMQPQWKGKFAITDPS
KSGTAYMLVYGLYKQFGTEGLDKIAANAVITGSSGTTYKGVAAGEYPVGLTLEYAAQEYVAGGQKEIKLVYPSEGSYLAP
EGMFIIKGAKNAEAARQLYEGLLSKEAQTAQLVKNFRRPSRSDIEVSKLTTLPELAAIKIFPVDQLEAAADYEKVIAAWN
AAVAKAR
>AHV92558.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MAAAFVPVMVFLVDFIARGQRLGASEGAYFWVLYGVGAMLGPALYRLLIDRFGATLTLRMMLSSQMLAMLALAQVDHHGV
LACLTLLLGTFPSGIAPTMLARIHQWMAGAAQQAAVWSRATTAFAVLQAASAYGYSALFNHTDGRYALLFELGAGFMGLT
FLMDFGYTALQRENKVA
>AHV92559.1 hypothetical protein D560_0856 [Bordetella holmesii ATCC 51541]
MHRLVRAPSLLMAQHWLNLLRQARVAADVHNQHLQGALGEIPADQCGPEIWIEREADRDLALRLIGLAPGGDGPALPWRC
PACGERLEPQFSACWHCGTDRS
>AHV92560.1 tRNA-i(6)A37 thiotransferase enzyme MiaB [Bordetella holmesii ATCC 51541]
MHETTLKREGAPAASSPAPTASGKIYIRTFGCQMNEYDSDKMVDVLREDQGLEVTDNPEEADVILFNTCSVREKAQEKVF
SDLGRVQHLKKLNPHLVIGVGGCVASQEGEAIVKRAPYVDVVFGPQTLHRLPELIRRRRDEGVSQVDISFPEIEKFDNMP
PARIEGATAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEVADLADQGVREVTLLGQNVNAYRGRMEGSDEIADFA
MLLEYVHEIPGIERIRYTTSHPKEMTQRMVEAYARLPKLVSFLHLPVQAGSDRVLSAMKRGYTALEFKSVVRKLRAARPN
LTLSSDFIVGFPGETEEDFQKTMKLIADVGFDTSFSFVYSRRPGTPAADLSDDTPQDVKLKRLQQLQALINEQAAAIAQS
MVGTRQRLLVEGLRGATPTSSWAERKTTASLTSRGLHAWSATWWM
>AHV92561.1 ATP-dependent Clp protease adaptor ClpS family protein [Bordetella holmesii ATCC 51541]
MEFVVKVLQKFFGKNQEEATRIMLQVHHEGRGICGVYPRDLAATRIAQVAQYARAKQHPLQCIMEPV
>AHV92562.1 putative cell division inhibitor protein [Bordetella holmesii ATCC 51541]
MPTPEHIHPALWRATQLARASARVVPTGHSELSAQLPEGGWPIGCLTELLLPHPGSGEVRLLAAAIAERDDARAIALVQP
PFTPHIAAWRQCRLAPERLLWVAPPRPGDALWAAEQILKHASCTALLCWLPQVRPESLRRLHLAAQASDTLFFVLRPAQA
AHHASPAPLRLALAPAPNGLSIQILKRRGPVCDTPIFLPLDGTPNRAAQVFTPHAPLDRHPSPSSVSGQCASPVA
>AHV92563.1 ribosomal protein L21 [Bordetella holmesii ATCC 51541]
MYAVVKTGGKQYRVAAGEKLKVEQIPADIGQEITLDQVLSVGEGDQLKVGTPLVAGAVVKATVLAHGRHDKVKIFKMRRR
KHYQKRQGHRQNYTEIRIEAITA
>AHV92564.1 amidase family protein [Bordetella holmesii ATCC 51541]
MNLFFFAPDYSIQTMNTYENCDGLDLASAVRRGETSPTELLQEAIARIRTRNPVFNCVAYYDEDIGKKGIEQASRSGPFY
GVPFLLKDIGATAVGMPLSNGSRFFKGIVSSEDSELVTRYRRAGLAIFGTTTTPEFAVNCTTEALAYGGPTRNPWDISRS
SGGSSGGAAASVAAGIVPVAHGGDGGGSLRIPASACGLFGFKPSRMRTPTGPNGGEGWGGLAGDHVVSRSVRDSAAALDF
SQGADDGTPYTAPLFGGSYLKAVGEAPRRLRIGLVTRSPSGETTHPDCVAAAEDVAALCVSLGHIVEPIDFPAAIEYERF
GHAMRLIVASGTASAVQAREQALGRKATEEDLELSIFTAVDFARRHSAVEYFEAISLMHTTGRHLGRLMRQYDVLLTPTL
ASPPVELGVYAADKDYVAHRSATLKYTAFLPYFNASGQPAMSIPLHWNSVGLPIGVQFAAAQGEEALLFSLAGQLEAARP
WFHRRPANLP
>AHV92565.1 putative transposase [Bordetella holmesii ATCC 51541]
MIRVDAIWLATEPLDMRAGTETALARVVAVFGSARPHHAYCFANRRANRMKVLVHDGIGVWLAARRLNRGKFVWADALRG
PHVAVDSEQWQALVLGLPWQHVGGAGAISVL
>AHV92566.1 polysaccharide deacetylase family protein [Bordetella holmesii ATCC 51541]
MSNPRIAHAFPQDRPACEPPPGGRIMVHLVINVENWRFDQAMPRTIITPPHGRETVPDVPNFSWADYGMRAGLVRMLEAI
GSRGLPASTSCNASVIDAYPRAAQAMLRAGWEFIGHGMHQQSLNHGDGERELIEACLEKLRAFTGSRPRGWLSPGLRETL
DTPDILAEAGVDYVCDWVVDDLPNWMRVQQGRLIQMPYNLELNDSVIYAVEKHSTPEFLLRLTRTLEVFGKEVPSSPRVL
ALGLHPHLMGVPHRFGDFERMLDLLIQHPDVVFMTGSQIADWFTSQYPAP
>AHV92567.1 transposase family protein [Bordetella holmesii ATCC 51541]
MGQIYSDAVGQYYIGADIEAIKRAEAGLAVPELCRELGISSATFYKWRSKFGGMDVSMMSRMKELEAENARLRKMYVEER
LKAELRAEALEKKW
>AHV92568.1 hypothetical protein D560_1260 [Bordetella holmesii ATCC 51541]
MGIVNIDDELHDQIRKASSVTCRSINAQAAFWIKIGMLCELNPALSFNEVLASQLRAAGVQTPALQEAAA
>AHV92569.1 PTS system, nitrogen regulatory IIA protein [Bordetella holmesii ATCC 51541]
MSRILPAGNVVLDMLATSKKRAFEQAGLLFENHNGLARSVVFDSLFARERLGSTALGQGVAVPHGRVKGLEQAVAAFVRL
AQPIPFDAPDGQPVSMLLCLLVPETATQQHLDILAELAQLMSNKALREALATETDPSIVHRMLTTGQL
>AHV92570.1 putative diguanylate cyclase YeaP [Bordetella holmesii ATCC 51541]
MAATLWHAFIIVENLVSQLAASLPAAKTLEQLTRPLLDILGAVTGMESTYLTAIDLQQDVQQVRFARNAGLMKIPEGLEV
SWSDTLCKRALDEGCQFTNDVAQRWADSDAASALGIQTYLSAPVRSEEGRLLGTICAASAEVKPIPIDAQTVITLFSTLI
SGFIERERLLRQLQSANESLRVIALNDALTGLPNRRSLYETLEIMLARASEQSESVIVGLMDLDGFKQINDKHGHHAGDA
LLCAVGRRVSGALRPSDVLGRLGGDEFMLVAAGPADDAHARNLAQTLEQRMQAESKGEYVLNDIRLSYAGASVGVIAFVP
GQHTHIDADIPVRLADARMYEVKRQRRNRLS
>AHV92571.1 yceI-like domain protein [Bordetella holmesii ATCC 51541]
MRSLVALAVALAAPAHAAQAAAITYDIEPSHTYPSFEADHMGGLSTWRGKFNRSRGVVVLDREAKTGSIDIEVDIASVDF
GHDEMNRHAIAPDIFDAARYPTATFKGRFTAFDGDKPEKVRGELTLRGVTRAVTLTIEDFNCMIHPMEHREVCGADVSAS
LNRRDFGLDFGLNMGFKPRVKLNIQVEALRRPG
>AHV92572.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLDGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92573.1 proton-translocating NADH-quinone oxidoreductase, chain M family protein [Bordetella holmesii ATCC 51541]
MQFVEKASWIESFNVNYHLGVDGISVWFVLLTAFVTIIVVAAGWEVITNRVSQYMAAFLILSGLMVGVFSALDGLLFYVF
FEATLIPMYIIVGVWGGPNRVYAAFKFFLYTLMGSLLTLVAFVYLWHASGGSFDILTWQQTKLGYTPQILIFVALLAAFA
VKVPMWPVHTWLPDAHVEAPTGGSVVLAAIMLKLGAYGFLRFSLPIAPDASHSLSGMMIALSLVAVTYIGLVAIVQEDMK
KLVAYSSVAHMGFVTLGFFIFNTAGVEGAIVQMISHGFVSGAMFLCIGVLYDRMHSRRIADYGGVINVMPRFATFFVLFS
MANSGLPATSGFVGEFMVIMGAVEHNFWVGLLAATALILGASYSLWMVKRVVFGDITNEHVREMSDLNRREFWILGVMAI
AVLYMGIYPKPFTDVMHVSVEALLQHVAVSKL
>AHV92574.1 inorganic pyrophosphatase family protein [Bordetella holmesii ATCC 51541]
MSFERVPAGKSLPDDFNVIIEIPMNADPVKYEVDKESDAIFVDRFMLTAMHYPCNYGYIPQTLSEDGDPADVLVITPFPI
QIGAVVRCRALGVLEMDDESGGDAKLLAVPVDKLYPPYRNIKSYEDLPAEDVARIQHFFEHYKDLEKGKWVKVKVWKGVD
AAHAEILRSAERYGKGD
>AHV92575.1 hypothetical protein D560_3657 [Bordetella holmesii ATCC 51541]
MFEKISAVDDADRPVMLIQHGQGMLVALLLKNSMHVVVTVAREIHRRAFGAQVQGGSARSDGLGGTRDGG
>AHV92576.1 outer membrane porin protein [Bordetella holmesii ATCC 51541]
MASKFLGSIDPFSISYNTANLGTTFSSANTMRLDNMVLYQTPSMSGFKFGIGYAFNADDTQDSNGRKGFQTNDNNRVLTT
GLQYLNGPLNVAVVYDRLNLSNNTTGGKTADSVQTYAIGASYDLEVVKLAAAFGQTRDGWFVGQDMGTTPTGMEKFDSFR
GADGFRANSYMIGATVPLGRHAVFGSWQRATPNNDKLTGDDATFNVYSLGYTYDLSKRTNLYAYASYGDNYAFQRDAKDM
AFAVGIRHRF
>AHV92577.1 pseudouridine synthase, RluA family protein [Bordetella holmesii ATCC 51541]
MVEVEVGQEGQRLDNFLLRLCKGVPKSHIYKAIRGGEVRVNKGRSSADYRVEVGDIVRVPPLRLPDPGAPRPVPASEFPI
VFEDDAMLVIDKPAGVAVHGGSGVSFGVIEQLRAARPEARFLELVHRLDRDTSGLLMVAKKRSALLALHAMLREGRGGKR
YLALVERDWVNDRQHIRFALTKWTTQSGERRVKVDPEGQVAHTIVTLKQRFGGYSLVEAELRTGRTHQIRVHLAASGFPI
VGDDKYGSDAVRAAFARRGFNRMFLHAYQLTLDHPLTGERLDLVAELPAACRNLLQQLETA
>AHV92578.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MRVCVIGAGVIGVTTAYFLAREGHEVVLLDSQAQPAEVSSYANGGQLSYSYVAPLAGPGVLASVPGWLLRADSPLRFRPR
LDPHQWRWCLQFALACNASAARRSTAQLQSLSYLSRDVLHRLLEQETLDFGHLRNGKLIVYRSAELLDKARKLASYQASL
GAEQQVLDAAATLALEPALAGMGNDLAGAIYTPSEEAGDCHQFILALYERLKALGRTQCLMNTTVTSLWTEGRRVVAVRT
DQGDIGADAVVLATGVGTRGLLKPLGQDVPLYPLKGYSLTVALASGEANAPAISVTDYERRIVYARVGRALRVAAMVDIG
SHDGGIDPARVALLKQQVMQAFPALDLSQAHAWAGLRPATPTGKPLIGRASGTDNLWLNIGQGALGFTLACGSAALLGSL
MSGLPPPIDPLPFQP
>AHV92579.1 feS assembly protein IscX [Bordetella holmesii ATCC 51541]
MKWVDTYQIAEALMDTHPAVDPKTVRFTQLREWVLALPDFQDDPARCGEKILEAIQMAWIDEAE
>AHV92580.1 phenazine biosynthesis, PhzF family protein [Bordetella holmesii ATCC 51541]
MQRLSAFAAGDTGGNPAGVVISEHLPDAATMQAIAADVGYSETAFAAPEAGVWRVRYFAPEIEIPFCGHATIALGAALAA
RHGEGRYALQINDALISVQAHRHDGQLQVALQSPPTRSQPAEAELIEASLQLFGYTHDDLDPRLPPALAQGGAHHLILAL
NNRQRLTGMRYDQSAGRQLMLAQGFATIAIVYAETAQRFHARNPFASGGVYEDPATGAAAAALGGYLRDQQWPHGGAIDI
IQGEDMGMPSYLHAEISPETGGSIRVSGTVRSLAG
>AHV92581.1 3-oxoacyl-[acyl-carrier-protein] reductase [Bordetella holmesii ATCC 51541]
MEHTIKDLEGKIALVTGATRGIGRAIAQELAARGAKVVGTATSQAGATTISEALAASGGRGVVLNVTDAAAVDALIDELG
KEGGGPHILVNNAGITRDTLAMRMKDDDWGSVIDTNLSSVFRLSRAVLRNMMKARWGRIINITSVVGSAGNPGQANYAAA
KAGVAGMTRALARELGSRNVTVNCVAPGFIDTDMTRVLGEEQTAALLQQIPLGRLGAPADIANAVGFLASPSAGYITGTT
LHVNGGMYM
>AHV92582.1 dihydroorotase, homodimeric type [Bordetella holmesii ATCC 51541]
MRDGAALEAVVGDTARQFARAIIMPNLKPPVTTTEQALAYRDRILTALNTSLGEGVDFTPLMTLYLTDNTPAAEIERAQA
SGQVFAVKLYPAGATTNSDAGVTDLLGKCGPALAALEKAGMPLLVHGEVTDPAIDVFDREAVSIDRVMRPLRRAYPGLKV
VFEHITTKDGAEYVRDAEGPIAATITPQHMLYNRNAIFQGGVRPHYYCLPILKREVHRQALVEAATSGSPRFFLGTDSAP
HAKGLKEHACGCAGCYTALHAMELYATAFDNAGALDKLEGFASHHGPDFYGLPRNSGKLTLVRQAYTIPQELPYGNSSIV
PLAAGEALHWSVQA
>AHV92583.1 spoVR like family protein [Bordetella holmesii ATCC 51541]
MGYAMMSDIRRICEAPTAEDRKWFPDIAGADWLRTLDFAMRNFKDESFISQYLSPRLMREFRFFAIADHMDNPKLEVAAI
HDDDGYREIRKLLAAQHNRDNQVPDIQVVRYHRESDRSLVLRHQQSRGRPLESGEADQVMKHLGRLWGFRVRLEEATPDG
TVLSYRQIEP
>AHV92584.1 putative glycosyltransferase [Bordetella holmesii ATCC 51541]
MLLGLSLAYIVAGLFMRDPWKTDDAVGMATMVTALREGGMTWLLPQVGQLAHAEEAPMITWVGAICIWIFGPLFGDITAA
RLPNLLWFAMAAISVWYGTYLVGRRPEAQPLALPFGGEPPPRDYGRMLADAALLLLVATVGILQRVHETSVVPAILAWQA
LTFYAMARTLDRPLLGTSTLGLALAGAFLTRGWMGARPSCWPRCLPSFPAARCGKGCAGCPGPHSWPPH
>AHV92585.1 hypothetical protein D560_3679 [Bordetella holmesii ATCC 51541]
MLVRVTPETPLGTKLTPTTFSHSVLAGFCEYTVGEEVTDDDDLIDDLIQNGRVEFVMEASSDYPQVDSPYGVMIRLPGIT
DEIGVALQVVSAHKEMLSAGKKEWVIGTNGTLLGGFNGTITLSSPTDQELSYLITKIAQVTKPGKRLIGGGRQNIFTVKW
VLVFRGERHILGRSSVMMSTGISRLSVLPQGCSYKNITQTLPNVRRADFKGVGSTLGETSFNVPVSCYGGPSAKLSIMPQ
HVYEMMAGVGLPDDMEAKGVGVQLLKDASGDTPWEFSMARPLDEAKRTEERVQIDIPLRARYYQLKKDVQAGPLRVVYNV
TLTYD
>AHV92586.1 tyrosine recombinase XerD [Bordetella holmesii ATCC 51541]
MPETPVLVAQPDIDAFIDAIWLEDGLAANTLAAYRRDLSAFARWLQSPASGLSTGGDLCAAGGADIEAWFAQRHEDSRPT
TANRRLATLRRFYAWALREKRAAADPCLTLEAAKQPLRVPQTLSEAQVEALLAAPDLDTARGLRDRAMLETLYATGLRVS
ELVGLKTLDVSLSDAVVRVVQGKGGKDRLVPLGAEAAHWLQRYLSQARAELAGARVADALFVTSRAEAMSRQAFWQLVKK
YARLADVQAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKSLHAVHHPRA
>AHV92587.1 benzoyl-CoA oxygenase/reductase, BoxA protein [Bordetella holmesii ATCC 51541]
MNAAAELLRQHLIDPEICIRCNTCEETCPIDAITHDSRNYVVDADICNGCMACVPPCPTGAIDSWRLVARAQAYGLDEQL
GWDELPAEQPLTEASEMAAAAVAAELPMATAAGPSATVPPWSAAHPYVNLYTHKAPVTATVVGNYRVTGTDTDSDIRHIV
LDFGAQPFPVLEGQSIGILPPGTDVHGRTHHARQYSLASPRDGERAGYNNLSITVKRVTEGHDGQAVRGVCSNYLCDLVK
GDVVQVIGPFGNTFLMPNHPGANLMMICTGTGAAPMRAMTENSRRRLAQGGLGRLMLFFCARTERELPYFGPLMKLPADF
IDINLALSRDPGQPKRYVQDAIRQRAQEVLGLLTSGDTYIYVCGLKGMEQGVLQVMADIAQDGGHDWAVLSETLRREGRM
HFETY
>AHV92588.1 surface antigen family protein [Bordetella holmesii ATCC 51541]
MVEAPAKRAAVAVGFDDTAGARFETLYRQNVVFGQPVTMETGFGVDRLRQRAFLDFNLPPDSRGRRDAVGVLAQRSDIQG
LEVTRYALGFTRTQERKGAGDSRVEYETRWGALLAHDHVQIDGGDTYDLPTATVTADWLRRDVDSKYDPREGNLVAVGGG
VGTVLDSGDPFLRLRLRGQKWWPVGERDVLTLRGEVGRVWSNAKTRVPDDFGFRTGGARSIRGYRYQSIGLKQDDATVGA
PTLAVASVEYDHYFNERWGVGFFVDAGDAAESFGGMDIAVGYGVGARVRTPAGPLFLDVAYGQREHDLRLHFSLGIAF
>AHV92589.1 DJ-1/PfpI family protein [Bordetella holmesii ATCC 51541]
MADERAAKLAALTSFNNPVALSSLTDAAMAEFDALFVPGGHGPMVDLPDNPDLSRLLRILHADGKIIASLCHGPAMLLSA
PDRADGQWLFEGYRMTSYTNDEEDQNRIGQLGMTWYLADALQNAGAIFDDAPYAWASHVVVDRNLITGQNPNSTEATSEA
VVKALSSASA
>AHV92590.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MTLRRSTKVLLDNAEFVVNPGERVGFVGKNGAGKSSLFALLTGTLDQDAGSLDVPSGWRIASVQQEIAADDKPAREFVID
GDTHLRALQAERASLPDDQGDRIAELEAALAEADVWSANSRAEQLLAGLGFAPDEWMKPVASFSRGWRMRLALARALMAP
SELLLLDEPTNHLDLDAMLWLEKWLAAYPGTVLLISHDTEFLDAVARVILHFDHGKLIRYRGGYEDFLTQRAERLHQASI
AHERQTRETARLQGFIDRFKAKASKAKQAQSRVKALARMQTLAPLHAEAGIDIRIPSPDHTPDPLLVLDKMAAGYTRADG
EPVAILQNVTLMVRAGARIGVLGANGAGKSTLIKTLAEELPLQAGERRASRGLAIGYFHQHQLDMLDLDATPLQHLARLA
SDTREQELRNYLGGFGFSGDTVNSKVAPMSGGEKARLALSLIVWQKPNLLLLDEPSNHLDVETREALAAALAEFSGSMLL
VSHDRHLLRTTVDSFWIVSDGQVREFDGDLEDYRDWLTARNAEARAEAAPKESDSVDRKAQRRIEAEQRQKLAVLRKPLQ
ARLAKVESEMDKLRARLHALDALIADADLYSDARRSERQQVMSEHGEVGKRMNTLEEEWLDIQTSLEDLAQDLPG
>AHV92591.1 2-isopropylmalate synthase [Bordetella holmesii ATCC 51541]
MLANPATKYVPFQPFARDYSERTWPSRRITKAPIWMSTDLRDGNQSLIEPMSVERKMRFFEQLVKIGFKEIEVGFPSASQ
TDFDFVRKLIDEKRIPDDVTIIVLTQAREDLITRTAEAAAGAKQAMIHLYNACAPAFRKIVFNMSKDEIKNIALTGTRQI
KAAMQRYPQTQWRYEYSPEVFSTTEPEFALEVADAVAEAWDATPERKLVLNLPATIEATTPNLYADQIEWMHKNLARRDS
IILSVHPHNDRGTAVAAAEFAVMAGADRIEGCLFGSGERTGNVDLVTLALNLYTQGVHSGLDFSDIDEVRRCAEYCNQLP
VHPRHPYAGDLVFTAFSGSHQDAIKKGLSQQRPDGVWEVPYLPIDPADLGRSYDAVIRVNSQSGKGGVSYLLEQEHGLVL
PRRLQIEFSRAIQRVTDETGSEVTSEDVYSIFASEYLEQRGPWKLVRHRIDGNPSAGEGKQFAIEAELEYDGERRIVRGN
GDGAISAFVAALDVPVRIMDYHEHAIGTGTDTRAASYVEVRVGESPTGFGVGIDRDIVTASFRAVLTAVNRHIQAQGDAA
AAEPEAATA
>AHV92592.1 phosphate acetyl/butaryl transferase family protein [Bordetella holmesii ATCC 51541]
MPESRAPHYERLIERARELPAATCAIAHPCDEASLSSAIEAARLGLLVPILVGPQRKIREVAEQCGLDLTSVEIVDTPHS
HASAAAAVERVRCGQASLLMKGSLHTDELMHDVVARDTGLRTGRRISHVFVMDVPSYVEPLFITDAAINIFPDLDTKADI
IRNVIELHLGLGLGAPRVAILSAVEQVTRTIPSTLEAAALCKMADRGQIVGGLLDGPLALDNAISLEAAKVKGIVSPVAG
RAQVLVVPDLEAGNMLAKNLTFLAGADAAGIVLGARVPIILTSRADSARSRLASCAVAMIYANHLARNAPIQ
>AHV92593.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV92594.1 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase [Bordetella holmesii ATCC 51541]
MIGLSAHGPTAIQVHNMSKEHMDEFSGKVIVITGGARGQGLLEARMLIERGASVVIGDVLEQEGAQAARELGERARFLRM
DVSREEDWQQALAAAQDMGRVHGLINNAGIYDPHPIGATTAKNFERHFQVNQLGAFLGMKVFAGHMRAQRHGCIVNIGSA
AGMRGSPNSFSYCATKWALRGMTKALAADVGVDNVRVNYVAPGPVNTAMIGFRGEQANRQRAAEVPLGRLADAEDVAPTV
IFLLSDAAKYITGAEVMIDGGLYL
>AHV92595.1 GTP cyclohydrolase folE2 [Bordetella holmesii ATCC 51541]
MNSPIDPAIVMPDVQSSADTRHIPIQRVGIRGVRHPMLVVAGDGDAQPTVANWTLTVALPAEEKGTHMSRFVALLEQYRA
TPMTPALFSQMARDMLPLLHADRGDLTASFPYFINKSAPVSGVRSLLDYEVTWTARAAGDQVEFELRVLVPVTSLCPCSK
AISEYGAHNQRSHVTVSAILGSEVAMDAIIRLVEDEGSCELWGLLKRPDEKYVTERAYDNPKFVEDLVRDVAARLKAHPA
VTRFCVEAENFESIHNHSAYAVVEG
>AHV92596.1 lysM domain protein [Bordetella holmesii ATCC 51541]
MRLILALSLIAVLAACASSSGGGAAGAGFHRVEAGETLTSIARRYDQSVADLVRWNKLSSANQIDKGQVLRVVAPGGSAK
ASSGASSPEPRRPRPRRGALPCGA
>AHV92597.1 endoribonuclease L-PSP family protein [Bordetella holmesii ATCC 51541]
MSSIKRFNVEKRLSDMAVYNGVAYLAGQVPDDASLDITGQTQQVLATIDRLLAEAGTDKTKILMAQIYVANMKEFDGMNK
AWDAWVPAGNAPPRATVEARLANPDYKVEIVVTAAIA
>AHV92598.1 twin arginine-targeting protein translocase TatC [Bordetella holmesii ATCC 51541]
MSHLVELRSRLLKAVGAVVVVFLILFAYPGASTIYDILAQPMLASLPEGTRMIATGVITPFMVPVKVTMMAAFIVSLPIV
LYQAWAFVAPGLYRHEKRLALPLIASSTMLFLLGMAFCYFFVFRTVFHFIATFAPQSITPAPDIEAYLSFVMTMFLAFGI
TFEVPVAVVLLVKTGIVDVAKLRQARGYVVVGAFVIAAVVTPPDVVSQFMLAVPLCLLYEVGLICARMIRPRAQPGGSEL
AERD
>AHV92599.1 ribonuclease P family protein [Bordetella holmesii ATCC 51541]
MHRPSEFAAALKGRRLARGAMFIVSAAPASPTGGQSSCARLGLVIAKRHAALASTRNAIKRVLREAFRHQRLALPAQDYV
VRLHSKVGPVSLTALKRAARSEADAHFGRIAR
>AHV92600.1 muconate cycloisomerase 1 [Bordetella holmesii ATCC 51541]
MLVKVYCSDGIVGIGEGTPIAGMAYGPESPEAMKLSIDAYFAPAMIGQDATRIQELMADLGKRVKVNHFAKSALETALLD
AQGKRLGVSVSELLGGRRRDRLPVAWTLASGDTARDIEEAEHMLEVRRHRVFKLKIGARDPLLDIQHVAAIKRALGDRGS
VRVDVNMAWSEAQAAWAVPALAQAGCELVEQPVASAAALARLMRRFPVALMADEVLQGPESAFDIAREHGADVFAIKIEQ
NGGLFAAQRVAAIADAAGIELYGGTMLEGAVSTAASAHLFATFAQLQWGTELFGPLLITEEILTQPLDYSDFELTVPTGP
GLGIELDDAKVKRFTRDGLSKATTKRD
>AHV92601.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MQILQKIRIGTIAALGILSVGASLSAQAEGEPRRPECIAPAQPGGGFDLTCRLATEGLKQSGALKAPMRIVYMPGGIGAV
AYNNIVAQHPKEPGTIVAFSGGSLLNLAQGKFGKYNVNDVRWLAGIGTDYGVAVVRNYSPYKDLKSLMEAFKQDPTKIVL
GAGGTVGSQDWMKAALTAKAADVDFRKMRFVAFEGGGEAVTALRGGHIQAYMGDAAEAFTMLEGGAPIRVLAVFNNERLP
GKLADIPTAKEQGYDIVWPIIRGFYVGPKVSDEDYQFWVNAFNKTMASPEFAKLREQQGLFPFSKTGPELDAYVKEQVKQ
YAELANSFGLIKK
>AHV92602.1 alpha/beta hydrolase family protein [Bordetella holmesii ATCC 51541]
MLAHTDILAFTGEAGRIECAVDYPDGDPKGWALVLHPHPLHGGARDNKVVTTIGRACTSAGLVVVRPNFRGVGASQGEFD
SAVGETADMLGLIPQIREALPGLANAPWVLGGFSFGTAVAAQVYATLAEQQASPAALMLMGPAVGRFQFREVELPEETLL
VHGEIDEVVPLAEAMDWARPRNLPIVVIPGASHFFHGKLITLRNLVAQRLKLALR
>AHV92603.1 merR HTH regulatory family protein [Bordetella holmesii ATCC 51541]
MKMKSVTITHTTVICPTDPLTAEELARACQAEIDWVVRLVEVGIVAAHGSHPAAWRFESADLSRALGARRLERDFGAGLD
AAALILDMEQEIRRLKGQMRALGLSR
>AHV92604.1 major facilitator superfamily MFS_1 domain protein [Bordetella holmesii ATCC 51541]
MFIAGVGFGFFQTPNNRAMLAGAPRHRSGAAGGLQATTRVFGQSFGTALVAIAFGLSAAHGPTLGLIAAAVCASLAIGVN
SVRIAKRIGQPER
>AHV92605.1 sulfite exporter TauE/SafE family protein [Bordetella holmesii ATCC 51541]
MGGSVAVAVLAVFLLAGFVKGCIGLGMPTVAVGLLSMTMPATQAAALLVVPAVITNVWQMASGGHFRVLLRQLAPLLITI
CLGTALGVWLFRNVSETGASSLLGAALLCYAAVGLSPLALRVPPRHEGWLGALCGAVTGLITAVTGVFVLPAVPYLQALG
MGRNLLVQAMGISFVVSTLAMAGGLVYAGALGPAELGGSAVALVPAMLGMWGGQKLRERISEKAFKRGFFVALALLGVNL
LLKS
>AHV92606.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MNLIFLGLLLLAVLLNCMTGVMASTLPALFPTRIRYSALASSFNVAIIVAGLTPTLAAWLVEETDNLLMPAFYLMVAAAI
GLITSFFLPETANKPLRGDTPNASDRREAKALLLEVYDDIEQSLVDVEAEIAELEGQIEKLREKRQRLADRHPHLE
>AHV92607.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MFHTPQAWIGVRWGVLIGLFIAAYTVVDAYGVKNLLIMPVLFDWFTCVTRTAMMTPHVFKRRTQYFPAMRGYWHLALAVG
LLSPLGYILVLYALRMGAPLSLVAPAREMSMMLGTLAGMFLLREKVGPGRLAGCGAILLGVVLLGSS
>AHV92608.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MASITIDRIVKVFDGQSVLRELSLHIPDGAFYTLLGPSGCGKTTLLRCIAGFYEPDGGRLLFDQDDMTHVSAHRRDIGMV
FQDYALFPDKTAFDNVAYGLKARGVGRADIKVRAIEALEKVGLAALAQRYPAQMSGGQRQRVALARALVIRPRVLLMDEP
LSNLDAKMRVQMRDVILDLVREARITTVFVTHDQEEALAMSDQIAIMDRGSIAQLGSPEALYGNPVNAYVADFIGSANVI
AVPAEVIGGSDNGGLPHVRYRIGPHPFDGVQGSATLGERGILIARPEELSLIAPAPRIPNALPGRVLRRQYLGFKTAYRI
ALEDGGEIRVELHSGNMVGDFQPGGTVQVLVPAHSRVVSE
>AHV92609.1 cytochrome C1 family protein [Bordetella holmesii ATCC 51541]
MIKKLMGALALLLSCTATHAAEGGFPLDRAPNLVNDLASLQNGAKLFVNYCLNCHGANAMRYNKLQEIGLTDKQIQDSLL
FSGEKVGDLMKIAMTPQEGKKWFGTAPPDLSVIARAKSINAGPSGSDYIYTYLRTFYRDTERATGWNNLVFPNAAMPHAL
WQRQGPRELTLVAMRPTEASDGTKSWERVTTLYDAQGYSTTKVEPVAHFSGHAGPPEAKFKALDPARVAAYDRDVADLTA
FMTWMAEPVQRFRVRLGVGVMIFLGLFLVVAWRLNAAYWKHVR
>AHV92610.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANQPLLTAYLMRDEL
KQLWFYQHPGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEY
FFLKIRSAFPGIPR
>AHV92611.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MHVFITGASSGLGLALAEEYARRGARLGLVGRRKAALDSLAARLPGEHYVYALDVRDRSALHAAARDFLARCGAGVDVVI
ASAGISAGTLTEATEDFEVFEAIFQTNVMATVATFEPFIDAMKAQGGGRLVGIASVAGIRGLPGQGLTAPPSRPSSRIAR
ACAWSWPPMASAW
>AHV92612.1 glutamate--tRNA ligase [Bordetella holmesii ATCC 51541]
MTSAKPVRTRFAPSPTGFLHLGGARTALFSWAFARHHKGTFVLRIEDTDVERSSDAAVQAIIDSMDWLGMQPDEGPFYQM
KRLDRYAEVLKDMLAAGTAYHCYCTPEEVEAMREAARAKGAKPRYDGTWRPEPGKTLPAIPADRKPVIRFKNPQTGVTAW
DDMVKGPVSFDNEELDDLIIARPDGTPTYNFCVVVDDWDMGMTHVIRGDDHVNNTPRQINILKALGAEVPQYGHVPMILG
PDGLKLSKRHGAVNVMEYDDEGYLPEAMVNYLARLGWSHGDTELFSRESFVEWFDTRHLSKSPSQWDPKKLNWVNAHYIK
GMDNAELARRVAPRIAKRGGDTTRADLPEIIGLFKDRAETLEQLADDAMLFCGAFKPAEADLVAQHLTPAAREALAGFAA
AASSTEWTRDAVSALIKTQLAERGLKMPQLAIPLRVAVAGRAQTPAVDAVLVLLGKDVVLERLAKLPA
>AHV92613.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MDTISIIGLTDTGTQAARQLLATQPECDLTVYDRDPVRGEVFRGQATLAGSPAEALRESHLIVLALSDSHEIDRVLQRYS
DGDVNAPLHGKHILDLCPHAEDWGRRLAHAIRAASGIYRASTARELPDLIAGAVASRST
>AHV92614.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MFNHVALTGGRITVSLTALQIGLSTFKVGTLVAVFAVLPMIFSVHAGRWVDKVGVRRPLIIGTSLVTLGTALPFLTTTQS
ALLIASCCIGIGFMLHQVATQDLLGHAEPRERLRNFSWMSLALAGSGFSGPLIAGLAIDHLGNRMAFGLLTLGPLLSIGG
LYLLRRRLTRADQALAGASTQRAAQKRRVTELLAVPPLRRVLMVNTILSGAWDTHLFVVPIFGVAFGLSATTIGLILAAF
AAATFVIRLLLPVIQKRVRSWTLVRVAMATAAVDFMLYPFFTDVSTLIVLSFILGLALGCCQPSMLSMLHHYSPHGRAAE
AVGVRMALINASQVTLPLTFGALGAIIGVAPLFWAYALALTAGGWFNRHPPQDTEMPS
>AHV92615.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92616.1 fecR family protein [Bordetella holmesii ATCC 51541]
MDASIERRAAQWVVRRNGVAPAALPDPSFEKWYRARDEHASCYDSIAELWQQMNHVDGPTLRRNVRGAQRRRALAALVCA
TLVAGLLVSRQSEPPANVIANSNGQVQTARLPDGSEVVLDAGAAIELDFRPQQRQIQLLRGRALFTVAPDAARPFVVLTP
QARSTALGTRYEVDRTHADETVVSVLESHVRVECLPCGPGTPPAVLAPGQRVQAGQNGMQETRFDAASDQAWTEGLLLLR
DVTLQDAVDQLSRYTGMRVWISTGLRELRISSLVTVQHPQALDTLARAAGAKVKRLGNWAWISRP
>AHV92617.1 acyl-CoA dehydrogenase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MQTGSATHISRAAGFYLQGKVEAGTLCPITMTHAAIPLLLREPGGAIDYARDWLPRLMSRDYDGTDAPLTSKRSVMLGMG
LTEKQGGSDLRAITTEARPLGQPGRGQPYSLVGHKWFFSVPQADAHLVLARADDGIGCFFMPRWIPNGPRNAIRLRRLKD
KLGNRSNASAEAEFEQAWAVMLGEPGKGLAVLLEMAATTRLDCVLGSAALLRQGLVQALHHAQHRRAFGQRLVEQPVMRA
VLADLALESEAAMLLGMCLAHAMDADERTLLRVVTPAAKLWVCKRACTALAESMEVLGGNGYVEEGPLARLYREAPVNAI
WEGSGNVMALDVLRALGREPQALARLGEDLKLAAGLDARYDRAVESWLISAAQPGQEQARALAAGLARLMQAGLMLRHAP
QPLGQAFVATRLRPGLYGEHLSEPAIAAILARAWPGIC
>AHV92618.1 cytochrome c family protein [Bordetella holmesii ATCC 51541]
MSNEQDHVEEHSSPIKTPRQLIVTIVLSFIVPIVVIILLVNLVVSGTQVGAGSDTLSEDATNKRIAPVAGFELVDANAPR
VYKTGEQVFAAVCTACHTAGVAGAPKVGDKAAWGPFIQGGFDAMLDVALHGKGAMPAKGGNPALSDFEVARAVVYMANKS
GGDLPEPAEPKPETGPETEAAADAAAVPTAPAAAMPANPPVAPAPEPAPDQAAAVNPAGEALYKSTCFACHGTGVANAPK
FGDKAAWAPYIATGLDAMVKVAINGKGVMPPKGGATTASEDDIRAAVQYMVNAAK
>AHV92619.1 patatin-like phospholipase family protein [Bordetella holmesii ATCC 51541]
MAKQRSPQAAAHTKSRRASREFDTVALVLQGGGALGAYQAGVYEGLHEAGIRPNWISGISIGSINAAIIAGSPEDERVER
LRGFWEAICRPTGFSGLPWGDVWAPMFQGLPFGFGSPQVNGHLAALNAVWHGQPGFFTPRYPSPYLLSNAGQASTSFYDT
APLADTLRRFVDFDLLNRSGVRASFGAVNVRSGNFNYFDSRDRVLGPEHVMASGALPPGFPAIEVDGRHYWDGGMVSNTP
LAKVLSDSPLRDTLAFQVDLWPARGPLPTTMDEVAERQKDIQYSSRTRTVTDNFAHVLRLRRGLQQLLERLPETERNSPE
LAELRAEACTPVVNIVNLIYEAKHYERHSKDYEFSTEAMREHWQSGLADIRRTLEQPGVLDRPSEQDPFVAHDVHRPGH
>AHV92620.1 hypothetical protein D560_2823 [Bordetella holmesii ATCC 51541]
MRMAGKLGLVHCQFPPWIQAGKRAMAQIETCARHLDELDASIELRHRSWFADPAATRCTLDMLRERRLIHTVADTPQGLD
NSVPAVWASTNTDLALVRLHGRNAQTWNAAGKASSSRFQYEYSEAELSELADGIARLQARRVHVVLNTNYQDQGVNNAAR
LLRALR
>AHV92621.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92622.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MYTRSLRRYAGVIAVAAPVAAGAQQVANPTPELAPVVVTGSLTQQDQKNVLGDVSVIDRATIERAGQSSVADLLQRQPGV
EINSNGGPQTATSVFLRGANSNQTLLLIDGCRINTATLGSGDFQGMPLGNIERIEILRGTASSLYGADAIGGVINIITRK
GGGDRPLSVYGNVGYGTHDTSRVSVGLDGAADSWRYALNAGYGHSRGYNATSKTIGGAANWSYNADRDGYEQNDVSGSVG
YTWAAGQEIAFDFYHTKLNGQFDAGGGMPPMNEYDDRLRQIINLYTLSSTNQLNDWWRSTLRLSQSNDTQRNLVAPGSYG
YPDDGRTRFRTRHRRHRVSVVRLAL
>AHV92623.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MAISSFSNPVRMNHAYNLLNLHNYSARDLLGGQDLFAQAYWRREKLDFYPFPNQFTYNDGTCPTAASCRRGFYYGASQQN
TDTRGLKTALSKNWEAFKVTYGLEFSREKFNGDTANFDWNRALASGGLDFDNLATLQRYPSYTADTWAAFAQGDWRLTDS
LTLSGGVRQQRNKVKLSDFVPVPQQVLMQNGLGTQAQAIPGGDNAYDTTLFNAGLLWKVDARQQTWINYSEGFELVDVAK
YYGNGSYRLQGNTWNLLSAVTIDGSELANIKTRQVEVGWRGDYGDWQLQTAAFYAWSDKALAIQPITLSVGLQDRKVRNY
GIEGQLNYNFNTRWSAGVNWLASRSEQQQANGGWARQTVTLASPSKASIYGAWHSGPASMRLQANRNFDLSDADGNRLKG
YLTFDLFGGYDLDKYGTISVGIRNLFDRRYQTVWSQRAQTLYAGLMTADSLQFNGRGRTFGLAYTVRY
>AHV92624.1 alkA N-terminal domain protein [Bordetella holmesii ATCC 51541]
MLGFLASRAIPGIEIVDAQRYARAVALTGTDGGMHTGWISVRHLPARHALDLEVSLTLLPVLPIVLARVRHLFDLTCDPH
PVHEGLAGMNTLAESMQILGTRLPGSFDPFEMAVRAVLGQQITVGAARTLASRMVSHYGIAVETGVPGLSHAFPSPERIL
ELNGDIETHLGPLGIIRTRARTIRALAHALSTGELDFGPGAIAEDEVQKLLTLPGIGPWTAQYIAMRAMAWTDAFMPTDF
GVKKALAPRTAGQIRELAQAWQPWRSYATINLWNALH
>AHV92625.1 fecR family protein [Bordetella holmesii ATCC 51541]
MNPEGTIDRRVAREAARWLMQLASGQASVEDMAACERWRARNALHEQAWQRAQRVSDLLGGLPPELARATLGRPAFKARR
AALKSLAGLILATPAAWAAWRGGEQAGLFAEYRSAPGERRDITLPDGAQITLNSATALDLTPDGLRLRVGEIYVRAGARA
CVAQTPQGQVMAQQARFALRLQDDGCRVEVYEGHVRVQPAFGSPATMPAPRTAWFDSTALHALPTVPDSQPAWLRGVLQA
RDMSLAEFAAEIARHRRGIVRCDPAVAQLRVSGTFQLDNTAGVLRALPALLPVTVHTRTPYWVTIGPLET
>AHV92626.1 hypothetical protein D560_2975 [Bordetella holmesii ATCC 51541]
MAHGVSPVVVCETGDSGSVCLPRIHATQSTDMLRSSAASAP
>AHV92627.1 glycosyl Hydrolase Family 88 family protein [Bordetella holmesii ATCC 51541]
MGLEELVQRVSGFIRDNPNERDCWQKAAEISGLLVWEMAEFQPLAKRWIDRAVATQKSDGNLSYGDWHTSSGGHIRSFTP
LASETAAVGAPMMQLHRRHPDPRYLESAARQYQALRDAPRTTEGGIWSRGEGPELWIDFTYLMCPFMADYGKLAGEPAAV
DEAFAQFRVHVVRLVDSEFHLARHAWCEKPNHFPQSTFWARGNGWLLACCAELLTIAPDHAQAPFVRDTYARVLGAMAGM
QDASGYFFHVLDDPLSNLEASATLMFAYAAERAIELDVPVAACPAEQLRARAIKAFTVVAGSVESCGRVPGVAMVPGGPG
VPFGWTLFGQGFFLLAAHALRDHLHGLEV
>AHV92628.1 HAD hydrolase, family IIIA domain protein [Bordetella holmesii ATCC 51541]
MKLIILDRDGVINRDSDAFVKSPDEWVALPGSLEAIARLSQSGWRVVVATNQSGLARGLFDMDTLNAIHIKMRRQLAALG
GSIDAIFLCPHGPEDGCACRKPRPGMMHDIALRYDADLNGVPAVGDSLRDLQASASAGCSPWLVLTGNGEKTRAKGNLPE
GTRVGAHLGEVVDLLLQDE
>AHV92629.1 amidase domain protein [Bordetella holmesii ATCC 51541]
MGPVRYAARQRRREQHVAAGQHLRQKILSAAAATFVGRGEPFVRHGRTRQGQGARQAAQLRRLTAQRLRVAVIRLAIEHR
LSQSHPFGKPGHGRVPALRCAAHGKRFQHGSDVVVHTALGVCPAGTDALRRLDRYARHELLPYCLQIRSGTSQQAHRVQA
RRQGCHADTRQSACRGLEAQKTAGGRRDAHRPRRIRTRRGIAKPGCHRDARPAGRPSDCRLRIKRIERQGIARVLAGGSA
GVFGHHQRGQRSCARGCKTLHHRRRRPSPRPGMRGAATRRAFRQHKNILVCQVNAGQRQRQISTWGRRQQVSHTVPALAL
KRQPLRPKRLVHAELAAPQRRTQCGDGFRQASGRHARPAARRARALATDSTSRDDAAIPSAANLSATSAAVGAMTCISKN
PLCIIF
>AHV92630.1 bacterial transcriptional regulator family protein [Bordetella holmesii ATCC 51541]
MRPLLPILKRLADRTGDAVFLVVRDGDDSVSLHREIGSYPVQILATYAGKRQPLGVGSGGMAILAALADDSAHDIVARNS
GRLDEFGGMTTHEMHRLIENTRSRGYSVVGNHAVRGALGVGCALLDGQGLPLLAVSVTAIIDRMPAQRQREIAGWIKTEL
ARLKT
>AHV92631.1 cobQ/CobB/MinD/ParA nucleotide binding domain protein [Bordetella holmesii ATCC 51541]
MNTIPPTKSARVFCIANQKGGVGKTTTAINLAAGLATHQQRVLLVDLDPQGNATMGSGIDKNSLQSNLYQVLIGEASIED
ARVRSESGGYDVLPANRELSGAEIDLVQMEERERQLKFAIENISSQYDFVLIDCPPTLSLLTLNGLAAAHGVIIPMQCEY
FALEGLSDLVNTIKRVHRNINNDLRVIGLLRVMFDPRMTLQQQVSAQLEAHFADKVFKTIVPRNVRLAEAPSYGMPGVVY
DRASRGAQAYIAFGAEMIERVKAM
>AHV92632.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MVNVLDKRIPTEKPESGLSAEAELRAATGTKERAGVIGITGGTDAFVVRVEGLKRRSSDYDVPDWPGGKLAGSYSESTQG
SVGMSWIGPRGYIGVAFTHIDSKYGLPGHNHEYESCHPHGDHLHCGGHDHDDDDHGHDHDHAAGGDIPYVKLRSNRVDLR
AEYLDPLPGFSKLRFRSGLTDYQHDEIEGGAVGTRFRNEGIDARLELEHKPWMGLRGVIGVQTAFSDFRADGEEAFLPRS
KTRANGIFLLEEYRLADWRFEAGARQDWQSVSPAGHLEKSRLSGTSLSAAAIWDFAPRYSLALSVSRSQRLPSAQELYAD
GVHLATNTYEIGNARFDRETSRNIDLTLRKHEGDTTLSLSAFHNRVKNYIYADTLDRFEDFRLIEYSQQDAEFTGVEGQI
NHQFSPLFSAGVFGDYVRGKLTGGQGNLPRIPAARLGARANVKWQQWSAGVEYTYVFRQKDIASYESETPGYSLVNAVVS
YRFKAAGAQYDVYLRGNNLLDKLAYNHASFLATSAPLPGRSVLLGVRMTY
>AHV92633.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MQSNDTPGSRVALVTGAGTGIGRAVALEFLAQGYKVVLAGRRREPLEQTRIAAGEDGVRALVVPTDVTQESDVRALFDEI
QREYDRLDVLFNNAGRSAPAVPIEDLPVEVWRSVVDTNLTGMFLCAQAAIRLMKAQSPRGGRIINNGSISSHAPRPYSIA
YTATKHGVTGLTKSISLDCRQYGIACGQIDIGNTATDMTERMAQGVLQADGSTRVEPRMDVAHVAQAVASMAQLPLDTNV
QFMTIMATNMPFVGRG
>AHV92634.1 isocitrate dehydrogenase, NADP-dependent [Bordetella holmesii ATCC 51541]
MSYQHIKVPTGGQKITVNADYSLNVPDQVIIPVIEGDGTGADITPVMIKVVDAAVQKAYAGKRKIHWMEVYAGEKATKVY
GPDVWLPEETLDAVKDYVVSIKGPLTTPVGGGIRSLNVALRQQLDLYVCLRPVRYFKGVPSPVREPEKTDMVIFRENSED
IYAGIEYMAESEQAKDLIQYLQTKLGVTKIRFPNTSSIGIKPVSREGTERLVHKALQYAIDNDRASVTLVHKGNIMKFTE
GGFRDWGYALAQNEFGAQPIDGGPWCKFKNPKTGREIIVKDSIADAFLQQILLRPAEYDVIATLNLNGDYISDALAAQVG
GIGIAPGANLSDSVAMFEATHGTAPKYAGKDYVNPGSEILSAEMMLRHMGWTEAADLIIASMEKSILSKKVTYDFARLLE
GATQVSCSGFGQVMIDNM
>AHV92635.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MFMSSTLICRALSASDLPLILRLQAELYPAELHESAAFFMNRIALAAATCRVVMNAQRLAGYLIAYPWDSGLPPALDLPL
DALPVRADCWFVHDCAVARWAQGKGVARMMLRDSARSAAQAGLTRASLVSLASAVTYWEKQGYAAATSSADLARKLAGYG
TGAVYMSRALPAQ
>AHV92636.1 hutD family protein [Bordetella holmesii ATCC 51541]
MMLHFFDTATVAATPWRNGGGTTRELACFPAGAAMDSFAWRISIADIDADGPFSAFAGIDRVITLLDGDGVRLYTEDGRI
DHRLDAPLAPFSFAGEEPILSSLLGGRTRDFNVMTRRQGWQAEVQILRANATLAPAGGSLVYACSGRWTVAGSHALGPGQ
GGFWTTDAGALPLAADSEGAALIAVRLTPLAGARA
>AHV92637.1 tRNA threonylcarbamoyl adenosine modification protein YeaZ [Bordetella holmesii ATCC 51541]
MDLNLLAVETSSARCGVALLLRRDGQECLTVLEHEGAQEHAERLLPMAGRLLAQAGLSPDALHGVAFGQGPGGFTGLRVA
CGVAQGVAMGLDIPVLPVVSHMAVAEAAGALYGQAVVVALDARMEEVYAAVYRRVPSPEGPAWEALQAPLLIAAAELLPW
VRHQMGVWRLEGPPLLAGDAWTVYPEAMPVPADWPRSPAARPQAYEVARLAVRDWERGLAVAPELAAPLYVRDKVAFTTV
ERQQGLGGNPRAERALVTSRPPEPVDDDTPIEPMTQADLPAVAALEARVQAFPWTQGNFADALAAGYDCCVLRSGGQIAG
FCVLMHAPDVSHILVIAVDRDSQRRGLGRRLIAWSAARARLHAVPALLLEVRPSNQKALDFYAQQGFLRVGCAKTIIRPA
MASVRTPG
>AHV92638.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MLGVSTRSVYIEPERAPRPTHACEVLEVSPLLRQLLLEAVDMPLRYDERGRDGALVALLLHEVARAPSLPLHIPLPQDDP
QFNDACLAFMRAPRIDERPADWARRLALSERTLLRRFRRATGMSFAQWRQRACLGQALAELARGVG
>AHV92639.1 nucleoside diphosphate kinase family protein [Bordetella holmesii ATCC 51541]
MSIQRTLSIIKPDAVAKNVIGQIVARFEQAGLKVIAARLQQLSRADAERFYAVHKERPFFKDLVDFMVSGPVFIQVLEGE
NAIQTNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPEINIHSR
>AHV92640.1 tadE-like family protein [Bordetella holmesii ATCC 51541]
MSPGRFSCCMRWGGQAAVEFTVALLALLLAACALYETMQWQRQRQLLHLALIEAARAGSVSHVHPQHMRAAFEAALAPLQ
HQSRHAAARAEGLIPWRLEVLQPSEAHYRRHGQHLPGLPELAINNDYQAEQDALRPGLPSIQQTNTLRLRLTYASAPATT
LLAALLPYLAPLAGDACRRAILAAGWLAIRLELAMEMHSHPTRWPELAQVHTRSRPCG
>AHV92641.1 phosphopantetheine attachment site family protein [Bordetella holmesii ATCC 51541]
MHTEQELHTRIAEIVESIVLKKVTADTPLIASGLVDSLAAVDITLAVESEYGCSIPAPEIAEHMQSVRTLADYVAAHT
>AHV92642.1 methylmalonate-semialdehyde dehydrogenase [Bordetella holmesii ATCC 51541]
MSEVPRVPLLIGGKLVQSKSTQWRDVINPATQQVVAQVPFATREELDQAVANAKEAFQTWRNAGQGQRMRIMLKFQQLLR
DNTSKLAEMITREHGKTLPDAEGEVGRGLEVVEHACSIASLQLGEYAENAASGIDVYTLIQPLGVCAGITAFNFPVMLPC
FMFPIAVSCGNTFVLKPSEQDPTTSLYLALEAGLPPGVLNVVHGGPDIANGLCEHPDIKAVSFIGSTRVGSEIYDRASKA
GKRCQSMMGAKNHCVVLPDADPEVALNQLIGAAFGAAGQRCMATSVAVLVGEARNWLPDFVERSKKLKVNVGTDRQADLG
PLVSVNARQRVESLIQKGVEEGAKLLLDGRGVEVQGYGQGNFVGPTIFDGVTEAMTIYREEVFGPVLCVVGVETLEEAVA
FVNRNPNGNGVALFTQDGGAARYFQNNIDVGQVGINIPIPVPVAWFSFTGSRGSKLGDLGPNGKQAVQFWTQTKTITARW
SAHGRSVNTTITMR
>AHV92643.1 argininosuccinate synthase [Bordetella holmesii ATCC 51541]
MTTILPNLPTGQKVGIAFSGGLDTSAALLWMREKGAIPYAYTANLGQPDEPDYEEIPRRAMQYGAENARLIDCRAQLVAE
GLAALQSGAFHISTAGLTYFNTTPIGRAVTGTMLVAAMKEDGINIWGDGSTFKGNDIERFYRYGLLTNPELKIYKPWLDQ
TFIDELGGRSEMSEYMRRSGFDYKMSAEKAYSTDSNMLGATHEAKDLEFLNSGIRIVKPIMGVAFWRDDVTVKAEEVSVR
FEEGRPVALNGVEYNDVVALLLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGLALLFIAYERLVTGIHNEDTIEQY
RENGRKLGRLLYQGRWFDPQAIMLRETAQRWVARAITGEVTLELRRGNDYSLLNTDSPNLTYAPERLSMEKVENAPFTPA
DRIGQLTMRNLDITDTREKLFTYVKAGLLSSSGNAALPQIKDDKQ
>AHV92644.1 tolerance efflux ABC superfamily ATP binding cassette transporter, ABC domain protein [Bordetella holmesii ATCC 51541]
MLITHDIQESFAIADRVYLVGQGQMKAWGTPETLSGSEDPYVRQFLDGAPDGPVAFRYPETPAFEAWLGQQQGRKS
>AHV92645.1 hypothetical protein D560_3897 [Bordetella holmesii ATCC 51541]
MGLWPSLAGGIARVAVGAATMRFALAAPGLSILMKRWIARALRRPAVTAKISKLARVPQGSDRVFERADRCCPEAFLLSL
CTRGL
>AHV92646.1 4Fe-4S binding domain protein [Bordetella holmesii ATCC 51541]
MLETVLKRDRDLGTPARTAQRLVSLTIDGQAISVPEGTSVMRAAAEAGINIPKLCATDSLEAFGSCRLCLVQIEGRRGYP
ASCTTPVEDGMVVVTETAKLHELRRGVMELYISDHPLDCLTCAANGDCELQDMAGVVGLRNVRYGHDGANHLQSAKDESN
PYFSYDPSKCIVCSRCVRACEETQGTFALTLSGKGFEARVSAGQDQPFMDSECVSCGACVQACPTATLQEKTVIMMGQAE
HAVITTCAYCGVGCGFKAEMKGQEVVRMVPWKDGQANRGHSCVKGRFAWGYTTHRERVLKPMIRERISDPWQEISWDEAI
QYAAAQFRRIQAEHGRDAVGGITSSRCTNEETWLV
>AHV92647.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MELFGSLSFFGGAIIGGLGLLIYRSLAAPWRLGYRHVIAGLSVLIWLAVFGVRPWQPAALFLIAGGLCGPPAAAGCAPGW
R
>AHV92648.1 alpha/beta hydrolase family protein [Bordetella holmesii ATCC 51541]
MKPAELSNADRMAIELGHAGRNSFAYIDDDRNADRPFTLNTYRPYGYTPEDPVVIVQHGVLRNGDDYRDFWIPAADKHRL
LIIAPTFSNDIWPGVESYNNGRVFTPSGNPRHVDGWTYALVGRVLKDLAASEISVCKPVYLFGHSAGGQFVHRLMSSQPS
EAFAGVIAGNPGWYTLPTLDLPYPEGMGGVGLTEQHLARLLAYPMIILAGDQDIVTDDPNLPSQPEALRQGPHRYARAHH
YYEAGRKEAERRGLPFAWHLQTVPGIGHDGRAMSAVAANIWFDGSMPDAETLATLAGHHTA
>AHV92649.1 putative flagellum-specific ATP synthase [Bordetella holmesii ATCC 51541]
MSKPAPAIDRWQTQLQIGSIRAAATEPTLATGRVTRATGLVLHATGLRLPVGAACRIEIARGHDHWADAEVVGFDGHTLY
LMPQADISGLPPVRRPGPAHGC
>AHV92650.1 benzoyl-CoA-dihydrodiol lyase [Bordetella holmesii ATCC 51541]
MDFRTEPQLYRHWRLNCEGDVATLAMDVSEDAGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRAVVVTSMKDRIF
CSGANIFMLGLSSHAWKVNFCKFTNETRNGMEDASAHSGLKFIAALNGACAGGGYELALACDEIFLVDDRSSAVALPEVP
LLGVLPGTGGLTRVSDKRRVRHDLADIFCTLVEGVRGQRAKEWRLVDAVVKPAQFQQAVQARVRELAAGSDRPGGAGVHL
KRLEREEGPQGLRYRHVDVSIDREKRLATWVVRAPAAPVQTEIDAILAAGADWWPLAMARELDDAILYMRTNELDIGTWV
IKTEGDAAAVLAADDVLQRHAEHWFVRETAGMLRRTLARLDVTSRTLYACVEPGSCFAGTLLELALAADRVYMLDDDDQP
VALTLNERNFGAYPMVNGQSRLQRRFYEEAGPLEAVRAAAGQPIGPQQALDLGLVTFTPDSLDWDDEMRLALEERRALSP
DALTGLEANLRFGGRENMATRIFGRLTAWQNWIFNRPNAAGEKGALKLYGKGEQANFDWNRV
>AHV92651.1 hypothetical protein D560_2236 [Bordetella holmesii ATCC 51541]
MLRRAVLALLADPRIAQVRVAVSAQDDWAAQALDGLPRTVWRPCGGPTRADTVAAALADAALSDQTWVLVHDAARPGLPP
EALARLIDACQEDDVGGLLALPVADTVKAAGVQEPGGCRVRLTVDRDGLWLAQTPQMFRAGLLRHALQQAREEAIAVTDE
ASAVEAQGLAPRLVAGSARNFKVTWPDDFALMEKWL
>AHV92652.1 zinc-finger domain protein [Bordetella holmesii ATCC 51541]
MWSMHPRVFLDVAHTGSARCPYCGTEYRLKPGTVVHGH
>AHV92653.1 rhodanese-like domain protein [Bordetella holmesii ATCC 51541]
MTKPLISVDDLAARLGEADLRIFDLRHDLMDHAVGPRAYEQAHIPGARYLNHETELSAERTGQNGRHPLPPRDQVAGLMA
AHGIKPSTLVVAYDASGGMYAAHLWWMLRWIGHERVAVLDGGWQAWNGAGRPTESGPVRTVAPLSGIVPAQPLVGTVDAQ
AVLQNIPAQAFTVIDARAGNRYRGEVEPMDPVAGHIPGALNRPNVENLTPEGRFKDAAELRSEFTLLLDGRDPHEIVHQC
GSGITACHNLLSMEIAGLTGSRLYPGSWSEWCADASRPVAKG
>AHV92654.1 thioredoxin [Bordetella holmesii ATCC 51541]
MSEQIKNVSDASFEGDVLKSSQPVLVDYWAAWCGPCKMIAPILEEVASEYAGRLTVAKLNVDENQDTAAKYGIRGIPTLM
LFKDGQAAATKVGALSKSQLTAFLDSAL
>AHV92655.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MKRGFYLVMAAQAFSSMADNALFIAAIALILELHGPDWMAPLMKWSFALAYVVLAAFVGAFADSFPKGRVMFVTNALKVA
GCLLMFSYASLGVPAAYQTYLVCAAYGLVGIGAAAYSPAKYGIVTEMLPPAMLVKGNSWIEGLTVLSIIIGTVLGGTLIS
PAVSGLLLHHPGLGKLVRTPAEAAILVIAVVYLLAALCNLLIPNTHVRYPTQQKNPIKLMCTFAGYVRVLWHDKLGQISL
AVTTLFWGAGATLQLIVIEWGRSHLGYRLDQASILMGVAALGTVMGSVAAGRIPLRRALCVLPVGAAMGLVVLLMPLVYS
PWSVYLLLLVTGALAGFFVVPMNALLQHRGHVLLSAGHSIAVQNFNEQLNILLMVAVYTLMLWLNMSINTVIVIFGLIVT
ILMLVFMRWSKRNLTRHPELYEQIGQEGHGKALDSLH
>AHV92656.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV92657.1 C4-dicarboxylate transport protein [Bordetella holmesii ATCC 51541]
MTDFLTVLSLPVFKLVALLMKAAPIGAFGAMAFTIGKYGIKSVVNLAMLVGTFYVTSILFVVVVLGLVARYNGFSILKLV
RYIREELLLVLGTSSSEAALPTLMQKMERAGCSKSVVGLVVPTGYSFNLDGTNIYMTMAALFIAQACDIPLTLGDQILLL
LVAMLSSKGAAGVTGADFITLAATLSVVPTVPVAGMALILGVDRFMSECRALTNLVGNATASIVVARWEGELDKDALQVA
LEGSRAAPAAEQAKQAKQAKQAKQAG
>AHV92658.1 cell division ATP-binding protein FtsE [Bordetella holmesii ATCC 51541]
MIEFQHVFKSYGRGRNILADINFRVDAGEFVFVSGPSGAGKSTLLKLIAGLEPPSRGSIQVHGQRLDKLSSRARPYLRRA
VSVILQDTHLLYDRSALANVMLPLSVIGQASDAAAGRARAALDKVGLAGKEDLNPIELSGGEQQRLAIARAIVNRPAILI
ADEPTANLDDDNAQRIMNVFRDFNRVGVTTLIASHDQQLMARYTRRTLRIDHGKFHDSQGEAA
>AHV92659.1 dihydroneopterin aldolase [Bordetella holmesii ATCC 51541]
MPTRRIFISGLALDARIGILEHERRATQPLHIDAEFDIDITRSVDDHDIQSVLDYRSLREAIVHECTQAHVNLIETLSEQ
VAARLLAEFPEVRTLRLRISKPMAFSDCNAVGVEIQISR
>AHV92660.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MQRRELLELIALAAVWGGSFLFMRVAVPEFGPAPLIELRVGLGALVLLPLAILRGRLGIMARHWKAIFGVGLFNAALPFL
LYAYASISLGAGFLSVANAVTPVWGAVIGWLWLRDRLPAMRILGLAIGFVGNLVLVWDKLQFQEGGSGPAVLAALAAPLF
YGVAANWTKRFLSGVDALANATGSMLSASLVLLPLAIAHWPEQAVSSQAWIATVLLAVLCTGAAYVVFFRLILVLGPTAA
VSVTFLVPVFGVFWGVTLLGEALTPSMLTGAAIILAGTALALGLVAPRKR
>AHV92661.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MTDIFGIPIQVLLGQLLLCLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFLAWMGLAYLGLNYWVMLVVAPLVV
GLFGIIIERLLLRHLYKLDHLYGLLLTFGLTLLIEGIFRSIYGVSGQPYPTPELLRGATNLGFMILPIYRGWVVVASLVV
CLVTWFVIERTRLGALLRAGTENPRLVEAFGVNVPRMITLTYGFGVALAGFAGVLAAPVLQISPLMGSNLIIVVFAVVVI
GGMGSIMGAILTGLGLGVIEGLTKVFWPEASSTVVFIIMAIVLLLRPAGLFGKEK
>AHV92662.1 capsule polysaccharide biosynthesis family protein [Bordetella holmesii ATCC 51541]
MKRSFLFLQGVCSPFFARMGMRLRALGHEVVKVNFTVGDTVYWQKDGAVAYRSGMPALSAFYSELFASRSITDVMLFGDC
RPVHRPAVLLARSKGVRVHVFDEGYFRPYWVTMEQGGVNAHSSLPRDPQWYCDAARKVPRYGNGLPFASPFWQRAAHDVG
YNVWAGLNPLLYPGYCSHVPHNPLAEYLSYARRGWRVYRRRGADARTIASVVAVSERQPFFLFPLQLGSDAQIRWHSPFE
DMRHALGHVMRSFVRHAPVRTALVIKNHPLDPGFVDYRAYTRRLAVEYGLQDRVHYLESGHLPTLLSHATGVVTINSTVG
GSSLAHGCPTIALAPAIYSLPGLTFQHGLDCFWTEYSVPEDALFHAFRNVVIHATQINGGFYCQRGIDMAVENALPRLSQ
PWARLDPVLGALERQSELASS
>AHV92663.1 ATP synthase F1, delta subunit [Bordetella holmesii ATCC 51541]
MAELSTVARPYAEALFGAARDDKAGLAAWAELLGELAQLAANPDVREAMTDPRLDDAQRGQVFTSLIKSPLPQAVRNFID
LLVQNDRLLLLPIIATQFVDLKNRHEGTAQAEITSAFEMSDAQVNELIAALEVKFGLKLKPHVTVDQSLIGGVRVAVGDQ
VLDTSVKAQLARLRDTLAA
>AHV92664.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVEKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92665.1 ribosome-associated GTPase EngA [Bordetella holmesii ATCC 51541]
MGDIPFIVIDTGGFEPVAKDGILAEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIARLLRKSGQQRVLLAVNKAEGMN
EGKAISEFYELGLGEPHPISAAHGDGIGDLIEVALQDLAAPEEEVEPSEQDGVEHRIKLAIVGRPNVGKSTLINTLMGEE
RVIAFDLPGTTRDAIEIDFERDGRKYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQSEISEQDAHIA
GFVLETGRAVVVAINKWDGLDDEQRERIEREFQRKLRFLSFARMHTISALKGQGIRPLLKSVNAAHAAAFAKLSTPKLTR
ELQAAVEQQQPPRKGIFRPKMRYAHQGGQNPPLIVVHGSALDAIPDSYRRYLETRFRNAFDLAGTPLRIEFKASRNPYAQ
DKE
>AHV92666.1 hypothetical protein D560_1817 [Bordetella holmesii ATCC 51541]
MLLRLCRRPPPSDTRHRQGKRAEDDALRLLRAHGLRLVARNVRNRHGELDLVMRDGALLVVVEVRWRASLAFGGAAGSIT
PAKQSRLARTALYWQTQARLHGQALRFDVVAFERGRPLWLRAAFEPDIPSQPLRRRRGPRRPSQAAP
>AHV92667.1 cell division protein FtsW [Bordetella holmesii ATCC 51541]
MSLFAELTASVNAVRPGRTRMRNTDLPLIVAASTLLLLGLLMVYSASIGLADGPRYASYGRYYFVLRHGIFVAVGLVAGA
VVLTMPIRVWQRLAMPLFMVSLVLLVAVLIPGIGREVNGAHRWIPLGPLNFQPSELMKLAALLYAADYTVRKQEHMQAFA
RGFLPMACALGGVGMLLLLEPDLGAFMVIVAIAIGILFLGGINGKYFSSLLAVLVGTFLMLIWLSPWRRARLFAYLDPWN
QENAYGSAYQLSHSLIALGRGEWFGVGLGASVEKLHYLPEAHTDFLMAVVGEELGFAGVMLVIVLFGIIVQRGFDIGRQA
IAMERTFAGLLADGVAMWFGVQAFINMGVCLGLLPTKGLTLPLMSYGGSGIVMNLCALAMLLRVDYENRTMMRGGRV
>AHV92668.1 cyanophycin synthetase [Bordetella holmesii ATCC 51541]
MGVYKVVVRAWHEEVTRAALHTARDLVMAAIEDRPFDVEQAVSDLRRLVDRHCLGPSTACIVDAADDRDIAYTRLFEGNL
VQFGYGARQRRIWTAETDRTSAIAEGISRDKDLTKSILQTCGVPVPEGQLVDSIEQAWEAAESIGLPVVVKPYDGNHGRG
VFTNLSSREEVESAYAVAVDEGSGVIVERFVPGNEHRLLVVGDRLVAAAAGEPAWITGDGTSTVQDLIDSQINTDPRRGR
TEDHPLNPVRLDSAARLEIARQGLTADGVPAAGRRVLIQRSGNVAFDVTDRVHPDTAELVALAARAVGLDVAGVDLVAED
ISRPLEEQRGAIVEVNAGPGLLMHLKPADGKPRPVGRAIVDHLFPEGEDGRIPIVGVTGTNGKTVVARLISRLLHLSGKQ
TGLACSEGLYLNKRLVQKGDCANWAAGRRVLMNRNVEAAVIENDSAVILGQGLAYDRCQVGVVTNIDDGDHLGDFDINET
ERLFTVFRTQVDVVLPSGAAVLNARDPRVVEMAELCDGEVLFFGIDPELPALVQQRAQGRRAVYVRDGQIVLARGEHEET
LAAIAAVPLTHGARVDFQTENVLAAVAAAWALDISIELIRAGIETFDIDQADAPWQFTVFERDSVTVVVDDVHNASGLRA
LTTAVRRFPAKRRVAVYSGGADRRDADLIEQGRLLGQLFDLVVLYDDTTVKSRRPAGQARALLRQGLQDSGRTVQIVDEP
DHARAIGHVLDGRASEDFILLQSDEAFSGPTIDLVRRWIQQ
>AHV92669.1 flagellar protein FliS [Bordetella holmesii ATCC 51541]
MTYAVRRPTGYQSARSYQDIGLETEVLSAAPERLITLLYRGARAAIAQARLHLEAGRVAERGQAISKATRIVDEGLKQGL
NLEAGGELALNLSELYDFVTRTLLRANLHADAAQLDVADRLLADLASAWESSVDPSPAGASA
>AHV92670.1 hypothetical protein D560_0138 [Bordetella holmesii ATCC 51541]
MTPGNWTPVGPPDGSGNVVVDNGGTAVLAPGSGTYGGSTINLGSTRGTGALVVTGATLTTGGLSIGDNNTGSLTLNNATV
SAGYYNVIDIGLGGNGNGLVTINGGSLISNQYLNVGSTGKGTLILNSGQVQAGTNWSVRIGEQAGSNGHVIVNGGVFRGS
VGLDNFVVGRSGVGLLEVHNNGIVNTSWTFVGGEYRDGNTPTSSGGTGTIILNDDALLTSADGIVIGGQGSKGDVTANDR
SRITSSVDIYVGYGGPGTLTLNGAQASATGSYYVGYTGQGVLTLDGGRASGARAIIGSQGGSTGTLRITNGGVFTIDGGT
VGSATNAVGSALVSGAGSEWRVNGILYFGGNGQGTLTLQNGGKATVTSDISLGPGPARGW
>AHV92671.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MAEMTAPIVELAEWFQTPPGKYVLEWERARFDEEVADVFGFYAWQMGLSSPDLLLSNRMPFKGWIGAETLDGEVNWQARI
LAQPELLPFESQSVDLLLLPHVLECAEAPHLVLREVERVLMPEGRVVISGFNPWSLWGCATPCPAWSPGCPCL
>AHV92672.1 hypothetical protein D560_0838 [Bordetella holmesii ATCC 51541]
MALVALSFVIAFLGAYVALSAAARIRLNVQYGDNWRGFAVVGAVAMGGIGIWGMHFIGMQAQYLHST
>AHV92673.1 xRE family transcriptional regulator [Bordetella holmesii ATCC 51541]
MGVPLAGLFEAGCQARGPLRRHGEQTVWRDPASGYERRALSPPGWPSPLQLVEVVFPPGARVAYETGLRRPALQQQIWML
AGSIDIALGEDRFALNAGDCLAMVLDQSIVFSNPRPEPARYLLATLDPLAP
>AHV92674.1 phenylacetate degradation putative enoyl-CoA hydratase PaaB [Bordetella holmesii ATCC 51541]
MSYQDIEFSLADGIARLTLNRPDKLNSFTARMHGEVADALTQVETQGARVVVLTGAGRGFCAGQDLSERRPTADGSPPDL
GETVEKFYAPLVRRLAALPLPVVVGVNGVAAGAGANLAFAGDIVIAKESASFIQSFCRLGLIPDTGGTFVLPRLVGRARA
FGLAMLGDKIAARQAQDLGLIWQCVADEAFEETLEKMARHFARAPTKGLAFSKRALQASLGNDLATQLDLERDMMRELGR
SADYAEGVAAFLDKREPDFKGQ
>AHV92675.1 sulfate adenylyltransferase, large subunit [Bordetella holmesii ATCC 51541]
MNAINDSFLSGADRGVLRLITAGSVDDGKSTLIGRLLFDSKGVFADQIDAISRAKHKRVAGDGIDLSLLTDGLEAEREQG
ITIDVAYRYFATPSRKFIVADAPGHEQYTRNMVTGASTADAAIILIDATRAADGKLLPQTKRRSTIARLLGIRHIVVAVN
KMDLVDWDPAVFERISAAYAELAGKLDLPHFHILPLSALNGDNVVHPSSRTPWYEGPPLLILLESLEQGADGSVLPLRFP
VQWVMRHDGDRADDFRGYAGRVASGTLAVGDEILVQPSGVAARVAALRVFDRNVAEAVSGDSVTVILDRDVDVSRGDIIT
HAAAPASVTREFDAEVCWLDNHPLNSARKYLLKQGTRLTSAKIRGVLTRRDIHELQEVDDAQGKLDMNDIGRVSFVTRES
LAVDDYRDVPGTGAFILIDAATHQTAAAGMILRRG
>AHV92676.1 bacterial transferase hexapeptide family protein [Bordetella holmesii ATCC 51541]
MPIYQLDDYRPQIDPSAYVADSADLIGQVVLHAGVSIWSHVAIRADNEPIVIGEGSNVQEGSVLHVDRGSPMLIGPGVTI
GHQAMLHGCTIETGSLIGMQAIVLNNAVVGKNCLIGAGAIVPEGRRIPDNSLVIGVGKIVRELSPEEIAGMHAGTQHYVE
RGQHYKTALKRIG
>AHV92677.1 hypothetical protein D560_0585 [Bordetella holmesii ATCC 51541]
MAVVQRDLSGHIAVREGANSIFGAAAAGSVLGAAVGILAGPVGLLLGFSGGALFGSLVDADAAASNDLLLASLSSNIKPG
TTALIADVEEIDATLLDAYAKTAGGQILRVRYDELFDEVASAVTAAEAAADAAGAAIRAGKKAERKAEREKTWDAVKAKL
EKFFSSSRA
>AHV92678.1 basic membrane family protein [Bordetella holmesii ATCC 51541]
MSARRLLVLFGQRGGFNEAALTGAARAEQAGQRLEVHWIADAQAREHALRALCASSPDLVIVHGGQGDVPVSAVAKDFPG
TQFAITQGSHVAGNVASYEILQEHTAFLAGILAALRAGDGAAAHLSGERVRPGLKGRAAYADGVQRISGRDPLTGFCGNQ
HDPELAGRWGQAMMAQGARVIFAMLDAGRPGLSAACRQAGVWQIGNVVDWVARDPQVFLASALADSGLCVQRAAADHAAA
RLATGRLTTFGLEHAQALRLVLGPEVSAAERAALDEWSARLSQGRISLAQDYVGPEFSPVSEALSEETRRYNEAGFFSPP
GCWLPGLSR
>AHV92679.1 phosphotransferase enzyme family protein [Bordetella holmesii ATCC 51541]
MNSPQTDPRLASLHAWLATLPSDLGLQPATLAPVSGDASFRRYFRLQAAGRSLILMDAPPPHEDIRPFVHVDGVLAAAGV
NVPAIVAQDSTQGVLLLSDLGEKNYTQRIREGIDDATLQQLYRDALAALVHMQKADTAGLAAYDAPRLRAELELFGQWYV
GVHHQTTLDDQTSQSLERIFSLLATSNGSQPAVFVHRDFHSPNLMVCDEPRFGPNPGVIDFQDALVGPITYDLASLVTDA
RTTWEEPQQLDWAIRYWEMARKAGLPVDDDFAQFHRAYEWMGLQRNLRILGVFARLNHRDGKPGYLDHMPRVNAYVRQVA
QRYGVFSPLLRLLDKLDNREVKVGYTF
>AHV92680.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MEIYQLRAFVTVARLGHLTRAADALSLTQPAVSAQIKALEQSLGVALFERSAGRMVLARSGEVLLPTAEALLVLGAQLKS
EAQQLQGALQGALDLGLPSERPEFLRLGDLASTLMQSLPMVELKTHILTADALLEQVQGGRLAAALLIVAHPPRAVQWRP
LRSVRYRLAVPKTMRDALTRAGWRDIAQLPWLDGPAGSHTHLLLRDMFERHGLAPRVVMQNDDQANLDAMVRAGAGCALL
REETALAGAAAGDFIVWGQARADAMLGFIQSPEHAGEALLVALSSLVQKIWKPGATATATHD
>AHV92681.1 modulator of DNA gyrase family protein [Bordetella holmesii ATCC 51541]
MKLIDPAIQSLATAKSLLLDPWGLTEADLARALGEIFAHKVDYADLYFQYTRSEGWSLEEGIVKTGSFSIGQGVGVRAIS
GEKTAFAYSDSLSPEALLSSAHTVRGIARQGAGKVKVAAHRPVQDSRSLYADIDPLATLSAPDKVALLERLERMARVRDP
HVIQVMAGLDAEYDVILVAGSDGRLAADVRPLVRLSLTVIAERNGRREMGHAGGGGRSGLEYFSDEILRDYVERAVHEAM
VNLEARAAPAGEMPVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGQRVASKGVTVIDDGTLLGRRGSLNIDDEG
NASQRNVLIEDGILRGYMQDTLNARLMKTQATGNGRRESFAHLPMPRMTNTYMLSGDKVPEEIIASVKKGLYAVNFGGGQ
VDITSGKFVFSASEAYMIENGKVTYPVKGATLIGNGPDAMNRVSMIGNDMRLDSGVGTCGKEGQSVPVGVGMPTLRMDGL
TVGGTA
>AHV92682.1 fecCD transport family protein [Bordetella holmesii ATCC 51541]
MCMTSLGLGAGQFAYADLFAPAKADRAWQLLLVSRVPRTVALLLAGMSLAVAGLLMQMLVRNRYVEPSTAGTMESATLGI
FVVTLLAPGAPVLAKMLAATGFGLAGSLVFLALLRRVPLRSPFLVPLIGLILGGVIHAVTTYVALQHDLLQSLHAWTTGD
FSGVLRGRYELLWLGAVLTCVAYLAADRYTVAGMGKDFASNLGLNYARLTMVGLLIVSAISAVVVVTAGSIPFLGLIVPN
AVSLVMGDNMRRAIPWVALLGAVFVLACDILGRLLLYPYEVPIGTVVGVVGSAIFLWLLLSKRGRLG
>AHV92683.1 pyridoxal phosphate biosynthetic PdxA family protein [Bordetella holmesii ATCC 51541]
MPVVAVTLGDAAGIGAELVVKLLAKPETTQLANVVLIGDYWLWEEGNRIAGTPLPETELISSLDNVRARSDTSRAAFLAM
DTLEQETVVRSKAQPACGQSVLRILDRCMDAALAGSIDAICFAPLNKQAMKLGGMQHEDELHDFAAYLGVSGYFCEFNTL
GDLWTSRISSHVPLKDVAGYLGVERIEQAAELIYRSLLRSGVPAPKIAIAAFNPHGGDGGLCGREEVEIIEPAVKALQAR
QWPTASPFHGPFPADTIFLKAVAGEYQAVVTMYHDQGQIAIKLLGFSRGVTVQGGLPIPITTPAHGTAFDIAGKGTANVE
ATWQAFQLACRMGGSARADALLAA
>AHV92684.1 RNB domain protein [Bordetella holmesii ATCC 51541]
MYVFYEDDGSFKAGNILSETDASLQVESESGKRSKITRANTLFNFAAPEPAVLMREASALAEGIDLAFLWECAPQEEFDA
PVLAADYFGHAPSAVEQAALLMRLHGAPVYFHRRGKGHYRPAPPDILQAALAALDKKQRQAEQQQAWVDDMAQGKLPEEI
GQMAEALLVRPDKNTMQWKALDAACARLQKSPDRLLLELGAWPNALALHKQRFLAVNFPRGVGFPEISIPPVQQDLPLAD
AEIYSIDDVTTTEIDDALSVTRLPDGRVRVGIHVAAPGLAVTRGSDLDKLARQRLSTVYMPGDKIPMQPDSVIQTFSLDA
GREVPALSLYVTADPVTGEIIASDTRVERIVVRENLRHNQLDTQVTEAALADPDAALPYGDWLRPLWQLAQALSAQREIV
RGKPENNSRVEYSFYLDGDPDNPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLHQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVQNGVSARLVAPFKPKDADLFAIIGAFDAQYAAWADFQNAMERYWCL
RWLRQQNISRGVAHVLRDDLVRLGNAPLVTRVGGLPELERGAAVEIDIMGMDELSLELDCRYLGPA
>AHV92685.1 hypothetical protein D560_3343 [Bordetella holmesii ATCC 51541]
MRPYHSVVLDILSRDGVRDVLDAPCGTGWLGERSSAMVLDGVGL
>AHV92686.1 adenylylsulfate reductase, thioredoxin dependent family protein [Bordetella holmesii ATCC 51541]
MSHSALNSETAACWETLKATLADIARRHPDAALACSLAAEDMILIHAIEQNLLPLEIFTLDTGRLHPQTLGMLETVRQRY
GRDITVMHPQEQAVSEHVSEHGAFAFYESVELRKACCQIRKVEPLSRALAGRSAWITGQRRSQAITRGELPAEEPDPVFG
LYKFNPLADWSEDEVWAVIRALDIPYNPLHDQGYPSIGCDPCTRAIRPGEDLRAGRWWWESSDSKECGLHEGNRRHIPIA
VN
>AHV92687.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MQIGDITVIDNTKLKKAVTVAALGNAMEWFDFGVYGFVAYALGKVFFPDASPAVQTIAALGTFSVPFLVRPLGGVFFGLM
GDRYGRQKVLSITIIIMAISTFCIGLIPSYETIGLWAPVLLLLCKLAQGFSVGGEYTGAAIFVAEYAPDRRRGFLGSWLD
FGSIAGFVLGAGLVVLLQTLLGEGAFLEWGWRLPFFVAGPLGLLGLYLRHAAEETPAFTQQLEKNGAGGSRCSARPADDF
FSGNFL
>AHV92688.1 aspartate kinase, monofunctional class [Bordetella holmesii ATCC 51541]
MSLIVHKYGGTSMGSIERIKNVARRVAKWHAAGHQVVVVPSAMSGETNRLLGLAREITPQPSGRELDMIAATGEQASSGL
LAIALQAEGVQSCSYAGWQVPVVTDSAYTKARITSIDDARIRADLDAGRVVVVTGFQGVDPEGYITTLGRGGSDTSAVAV
AAALKADECLIYTDVDGVYTTDPRVVPEARRMPVVSFEEMLEMASLGSKVLQIRSVELAGKYRVPTRVLSSLTDPLIPLE
EEMVSGTLITFEEDEKMEAAVVSGIAFSRDEAKITLLAVPDKPGIAYSILGPVAAANIDVDMIVQNQSVAGTTDFSFTVN
RNEFLRTVELLKRDVIPAVSARELITDEKVAKVSIVGIGMRSHVGVASLMFQTLSQEGINIQMISTSEIKTSVVIDDKYM
ELAVRALHKAFGLDQAPAA
>AHV92689.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MTVLYDSQAVLRRPRNLAQGLVESFTERIRAGAIAPGQKLPTESEIMRQFGVSRTVVREALSRLQASGLVVTHHGVGTYA
LQPAGGTDFRVDPADLGAVRGVLVLLELRVCVETEAAGLAALRRTPEQLAAMRRTLDTFQSRMREQGDTITPDFEFHLLV
AQATGNRYFADLMSHLGSAVIPHTRINSARLASEDDEPYLVRVNFEHETIYGAIRRQDAEAARAAMRTHLSNSRERLRGM
DASR
>AHV92690.1 hypothetical protein D560_1512 [Bordetella holmesii ATCC 51541]
MLITFHSKATAEVLMRTGDAAPLLQATGKLTGGNIPERGVFTPDQLPAAIAALEAAVAGQPTPEEDENPDQEPKHPVDRE
VGMQQRAYPLLDMMRQSLAAHADLTWEVSRGW
>AHV92691.1 acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase [Bordetella holmesii ATCC 51541]
MSANIHPTAVVDPAARIDSSAKIGPYCVVGPDVTIGAGTEIGPHCVIDGVTTIGRDNRFYRFCSIGGMPQDKKYAGEATR
LVIGDRNTVREFTTFNTGTVQDGGVTTVGNDNWIMAYVHIAHDCHIANNTILANSVQLGGHVHVGDWAIVGGLTGVHQFS
KIGAHSMTGGNSSLMQDTPPYVLGAGNPCRPVGVNVEGLKRRGFSPASISALRDAYKTLYRRGLSLEEARNELRVRQQAE
PEVAADLQVLLDFLDVSNRGIIRP
>AHV92692.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MRLILGGRMSWYDIVWDTKTTGRYTEDSVYKQRVSAEFTPYAGLIFELTPQWSLYASYADIFKPQSERDKGGAQLKPILG
SNYEIGLKGELLDGKVNTTIALFRIDQKNRAQTDYSSDPECDMGWYCSVASGKVRSQGVDAEISGEIMAGWNLFAGYTFN
TTKYLQDQNNEGKTLNGFTPKHMLRLWSTYRLPGEWNRFTLGGGVNAESGSYDTGSVRFDNPGRAVWSAFARYRINKNWA
ASVNVNNIFDKRYFTNVGTNNGGFYGDPRNVMLTLRGTF
>AHV92693.1 methionine adenosyltransferase [Bordetella holmesii ATCC 51541]
MANNDFLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTSANVDYIQVARDTIRRIGY
DNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDG
RLPWLRPDAKSQVTFRYVDGRPVEVDTVVLSTQHAPEIEQSAIHEAVIEDIIKPCFPDGLITPKTKFLVNPTGRFVIGGP
QGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTE
GTGVIPDDQIAKLVREHFDLRPKGIVNMLDLLRPIYTKTAAYGHFGRSEPEFSWEATDKVQALKKSV
>AHV92694.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSQKVLITAAASGIGLEIARAYVAAGATVFITDINQQAIDAAQREVPGLLATLCDNAKLADIEKMIPAAIKALGGLDVLV
NNAGIAGPTATVEDVDPAKWEQVIAVDLIGTFNVTRLAIPHLKQQPTASILIMSSLGG
>AHV92695.1 hypothetical protein D560_0357 [Bordetella holmesii ATCC 51541]
MNNALVFGARALVALCVFATCASITGCARQAARGQDGIDYRSRAPDAGSEPGRGQPPSNRRLTIQSGEGERLNLPWFIQD
TENWINGN
>AHV92696.1 lipid A 3-O-deacylase family protein [Bordetella holmesii ATCC 51541]
MHGLNKKIALTSIASLVLALAAGTAQAQQGSDGGVSVHYGIGDHYQRITLNYETPTWWSYQFGSNWGRLDLNGEFGGAYW
WADGSREPGHVWQANAIPMFRWWATDRFYLEAGVGATVFSHTSFADKRIGSAFQFGDHVGLGFLLTQNSRVGVRYSHFSN
ANIKKPNPGLDVVQLTYTYQF
>AHV92697.1 holliday junction DNA helicase RuvB [Bordetella holmesii ATCC 51541]
MAPAPASPNEESIERALRPKALQEYVGQRRAREQLEIFIAAARKRGEALDHVLLFGPPGLGKTTLAHIIAHEMGVQMRQT
SGPVLERPGDLAALLTNLERNDVLFIDEIHRLSPVVEEILYPALEDFQIDILIGEGPAARSVKLDLQPFTLVGATTRAGM
LTNPLRDRFGIVSRLEFYNTDDLAHIVTRSAGLLNADITPEGAREVARRARGTPRIANRLLRRVRDYAEVKANGRIDTEA
AGQALAMLEVDPQGLDLMDRKLLEAIVHKFDGGPVGVDSLAAAIGEERDTIEDVIEPYLIQHGYLQRTPRGRMATQTTWR
HLGLQPPAGSQFSSGDLF
>AHV92698.1 his Kinase A domain protein [Bordetella holmesii ATCC 51541]
MRRHDGFSIRRRVFMLALLLLACASIALFFFLRAYAGRAAEQAFDRLLAASALTIAGSVQIDDNGVTVEPPFSSLAMLPV
SERVFYQVLNGSGHAITGYADLALALPLADSAVPRFAYERYHDDAIRVATVGRLVSASQHAGWVTVRVAETLGSRQALAA
EILNRSLWPLLAVVVVALALLWFGIQRAFAPLAVVERELRLRAPDDLAPLRAPVPSEVRRLSEALNAFMHRLSTMMDNLN
TLVADAAHQVRTPLASLRAQAEVALEEQDAARLRERVARIHQNATQASQLINQLLMDATIAHRLGSGERAAVGVVETVNE
TRRRIGPLEAQRVRIAIAPQVRRARVMGDRVALREMLRNLVDNALRHAPASLVEIQVTPVSAYRVALTVLDRGPGIAESD
KERVQQRFERGSSDQPGSGLGLAIVRSVAQAHGGSLWLQDRPGGGLQARVVLPMARGRGAGKLAAALLACLCLWSASPPS
PAQAAGVVQETRYPAPRPGGRVLTVAGPTDTPVIAPLISGFQAQRPDVTVVYREMNSRELYDEAVAGQLKDVDVLISSAP
DLQIRLANDGFALSYASPYARDLPSWAVWRDEVYGFTFEPAVIVYNPRRFTEATVPRTRRALLRLLETEGASLRGRVATY
DIAISNVGYVLAEQDEMVSSAFWGLANALGRVGVRLAPTSGELLDAFERDELDLGYNLLGSYALARQAAGGAIWVVLPQD
YVLVLARSALIARSAPNPDLGRTLVDWLLSPAGQQVAANHAALGALVPGTPGPWTAQALQPQARGIVQPIALSPALLVGL
DQQRQARFVQTWMRLVTDTPERVDGAAKP
>AHV92699.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MNPQALELPAYETVSTRMHGPHTLLVTLDRAQNGNAINTQMGRDLLDLWSRLTEDAGAVRCVVLTGSGERIFCAGGDLKE
RNGMSRETWQRQHELFERMYWTLVDLPLPVIAAVNGHAYAGGLEMALSCDFVYASRQARFALTEVTLGIMPGAGGTQNLP
RAVGDRRAKEILMTGRPFDAGQALDWGLANALYDPAQVLPAALATAEVIAGNAPLSVRQIKKSVRYGGQMELRTAFRFEI
EAYNHLIDTDDRREGVLAFNEKRKPVFTGR
>AHV92700.1 aspT/YidE/YbjL antiporter duplication domain protein [Bordetella holmesii ATCC 51541]
MHSAMQFLADNPYILLFLTIGLSVWVGKFSFKGYGLGSVAAAIVVGCLLATLGSSFGVKFHLDDFAKSLLYYLFMYGVGL
RVGPSFVNALNKDSINYAILAIIAPVLGLVIVVFGVNFLDLPQGAAGGILAGSQTMSAAIGSAEQAISSGSLAIKDGMTK
EQVDAMIALSYGITYIWGTVGIILLCKYLPRIWGVDAKKAALEFEAEHGVPNVDDAGITAFHPFDVRAYRVVNDLPVGKS
IKEFRIKFPEYQVINVERGGQLLGADGAIVLQKDDVVALGGNLLSMTENMGIIGPEVPDAKALNIPLDQAEILVMNKEIM
GIPLKDFRSHPLAGQIQLQRIERGGVPIPMGLETKLQRRDVLFVTGLQVAVDKAGQIFGVIARHSSATDLLTLSAGMILG
FLIGLIEVPAFGAAVGLGNAGGLLLSGIIVSSISSRLRFFSNTPNAARNILEDLGLIGFVSIVGINAGAELLSQLTGTIA
LKIFAVGFLASTIPAIIVWAIGFHIMKINPALLMGATAGARSHSGPAREAAKEVGSSVPWLGFPVGYAVSGVLLTVFGYF
AMMMAK
>AHV92701.1 hypothetical protein D560_1920 [Bordetella holmesii ATCC 51541]
MAHQLQHITHPELTEDTRPVRIEMPSSMAMTLFAWPRAR
>AHV92702.1 ribosomal protein L13 [Bordetella holmesii ATCC 51541]
MKTFVAKPHEVKRDWFVIDAKGKVLGRVASEVARRLRGKHKPEFTPHVDTGDYIVIINASDIVVTGTKAQDKKYFRHTTY
PGGIRETNFEKMQERFPGRAIQKAVKGMLPKGPLGYAMIKKLKVYAGAEHPHTAQQPKPLDL
>AHV92703.1 hypothetical protein D560_0364 [Bordetella holmesii ATCC 51541]
MTPSIAATTALALTFAAFACLALAMDRHHEQVTGLDTPATRRWMLRLNGVALALAGLTCCLQAWGSAVAALVWLGLLSCG
AILVTLMLSYAPRRLPATALAAALAALALLCL
>AHV92704.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA [Bordetella holmesii ATCC 51541]
MIQPVGFTMGDAAGIGPEIIVKAFTHGLSVPAIVFGDVGAMERAARQVGTPLPVQQIGSALQASGRRDVIEVVQASAPLP
TDLPLGQVSAAAGRGAYDCLCRAIDAAMAGEIHAIVTAPLNKHSMHLAGIDQPGHTEILAERSGTKHYAMMLANDELRVL
LVTIHMALADVPAHITREAELRAIRLAERACRQMGIAHPRIAVAGLNPHAGEDGKFGCQDRDEIAPAVAEARTCGIDASG
PWPGDTIFMRARRGEFDIVVAQYHDQGLIPVKYLGIDHGVNVTVGLPFVRTSVDHGTAFDIAGQGVADARSLLVAFDLAL
AMTPG
>AHV92705.1 ATP-dependent protease La [Bordetella holmesii ATCC 51541]
MPEDARIIIPLRDAVLFPGVLTPVTVGRQISVAAAQEAVKTERPVGFLLQRDPQKDEVQPADLYWVGTQGPIARYITGQD
GAHHLLVQGQSRFRVLEFLEGWPFMVARVALVEEATADNSQVEARFLQLKQQALEAITLLPNVPDELGGVVQGIESPTLL
ADMVTNLVDVKPAEKQAVLETFDLAQRLDKVIGLLAARIEVLRLSKEIGERTRAQFDERQRETLLREQLRQIQKELGDTE
DTAAELEQLKTAIEAAGMPQDVLRHARKEFGRLQRMGEASGENAMLRTYLEWLTELPWKQEPQQPIDLNDARKILDDDHF
GLDKIKRRILEYLAVRKLNPDGRSPILCFAGPPGVGKTSLGQSIARATDRAFQRVALGGVHDEAEIRGHRRTYLGALPGN
IIQAMRRAGTNNVVLMLDEIDKLGAGGFHGDPGSALLEVLDPEQNHKFRDNYLGVDFDLSHVMFICTANALDTIPGPLRD
RMEIIQLPGYTAEEKVQIARRYLVEGQLQANGLQPAQVDISDAALTEIVSNYTREAGVRNLEREIGSTLRHAAMQIAEGK
AEHVSIGTSDLPAILGPQRFENEVALRTSVAGVATGLAWTPVGGDILFIEASKVPGSGRLILTGQLGDVMKESAQTALTL
AKTWSGESLDKFDIHIHVPAGATPKDGPSAGVAMFVALASLLSDKPISAEVAMTGEVSLRGLVLPIGGVKEKTLAALRAG
IKVVMLPRRNERDLEDVPPKPAASCVLFCWIGSRTRSSAPSRAPVKLTACRRPERTTPPAWPARS
>AHV92706.1 hypothetical protein D560_2084 [Bordetella holmesii ATCC 51541]
MRRAGQIHGARRVLGHIARRTAFGVLLMSGAGTTGKDYEEDR
>AHV92707.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSSKRVLVTGASKGIGKAICQRLTADGYAVVGVARTPPADPPAGMVFHAVDLSDTDAVTAFLASLADSEPFYGLVNNVGL
VPTGKLDDVRSEDLYRAVQLNVDVALRFTQAVTRGMRSRGQGRIVNMVSRAALGKAERTVYSMTKAGLIGMTRTWALELA
ADGITVNAIAPGPIETDFFAGANDAQRTRQLLAAIPAGRMGKPEDVAHAVAYFMDERCGFVTGQTHMVCGGMTIGTACPP
DTKDAI
>AHV92708.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MVEAALSLEGITCTFASRDDSKQRYTAVADTTLAIAPGEFVSVVGPTGCGKSTLLNVGAGLLSPSSGQVKVFGQVLSGIN
ARAGYMFQGEALLPWRNALDNVMAGLEFAGTPREQAETQAREWMRRVGLGGFEHRYPHQMSGGMRKRVMLAQTLIRDPDI
ILMDEPFSALDIQTRQLMENEVLELWMARRKAVLFITHDLDEAIAMSDRVVVLSAGPGTHPIGEFVIDLPRPRDVAEVRM
HPRFVELHSAIWGVLREEVLKGYAQQKRA
>AHV92709.1 trans-aconitate 2-methyltransferase [Bordetella holmesii ATCC 51541]
MSWSAKQYSAFENERTRPVRDLVAAIPDAEVRHAVDLGCGPGNSTQVLADRYPQAKVSGMDSSPDMVAAARKRLPGLAFS
QADISSWRPADRYDVILANASLQWVPDHATLYPRLLQTLTPGGSLAVQTPDNLEEPAHRLARAVAAEQPWAAKLAGVRHP
DRHSAEWYYALLSPLAQRVDVWRTTYMHPLAGARAIVEWFKGTALLPYLNVLDDNEQAAFLARYEAAIAQAYPALPDGTV
LLPFPRLFVVASRKA
>AHV92710.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHHGIGRAVPISRLNLDEYNLLTVHS
>AHV92711.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Bordetella holmesii ATCC 51541]
MKIPFRVGQGFDVHALVVGRPLIIGGVRIEHTHGLLGHSDADVLLHAVTDAVLGAAGLGDIGRHFPDTDPRFKGADSRVL
LREAMSRVREAGWQVVNVDATVHAQAPKIGPHAAAMAANVAEDLQVDATAVNIKAKTNEGLGYLGRKEGIAATVVALITR
LD
>AHV92712.1 proton-translocating NADH-quinone oxidoreductase, chain L family protein [Bordetella holmesii ATCC 51541]
MSSSPNLYLLIALAPLAGAILAGLFGTGFLGRPVGRRAAHCITILFVAISAIGSVVVLRDVLNGHTFDGAVYTWTLIGHT
KLEIGFLIDSLSAMMMVVVTSVSLMVHIYTIGYMADDPGYQRFFAYISLFTFAMLMLVMSNNMVQLFFGWEAVGLVSYLL
IGFWYTRPTAIFANMKAFLINRVGDFGFVLGIGLLFAYAGTMHYGEVFAQADKLAGLKLPGSDWALLTVACICLFIGAMG
KSAQVPLHAWLPDSMEGPTPISALIHAATMVTAGIFMVARFSPLFELSNVALSFIIVIGAIGALFLGILGIIQTDIKRVV
AYSTLSQLGYMTVALGASAYSVAIFHLMTHAFFKALLFLGAGSVIIGMHHDQNIRNMGGLRKYMPITWITFLLGTLALVG
TPFFSGFYSKENIIEAAGAANVWGASFAYYATLIGVFITSLYSFRVYFLVFHGKERFPAHDDHAHGHDDHGHDDHHHGGT
PHESPWVVTLPLILLAIPSVVIGAIVADPMLFGKFFDGVITVLPQHPAMHELHEEWHGWVAFGLHAFQTVPFWLVVAGAV
IAWYCYLINPKVPAKIQASLSGVNKVLENKYYVDWVNEQIIARGARCLGRGLWQTGDRGLIDGLLVNGSARVVGWVATVS
RHLQSGYIYHYAFAMIIGIMALVTFFVLIPQ
>AHV92713.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MSTVINPTIWPEPRPAPFQPGPTGTHITIRGLHKTFAGAPLYKDFNLDIPKGKIVSVFGPNGCGKSTLINMIAGLIPIDS
GEILFDGKSLAQTKIGYVFQNYREALFPWLRTIDNIAYPLRLEGRSKADVQRRVEELIASFDVKFDLNRYPYELSGGQQQ
TASIMRALAPGPEVLFLDEPFSALDFEMTLFIREKLQEVHMQTGTTMLLVSHDLEEAVYLADEILLLTKRPTRVAEILHY
DDPRSRTVETLSEPSFIQAKKLSLEIFQREVRK
>AHV92714.1 3-Deoxy-D-manno-octulosonic-acid transferase family protein [Bordetella holmesii ATCC 51541]
MRRGLYTALFCLAAPVLWLGMWRRSRRVPGQWEVLARTRFGHAEGEVMRGAVWVHAVSLGETRAAQPLVAGLLAQGLPVL
LTHMTATGRAEGARLFGEAISQGQLRQAWLPYDFPRACRRFFDLYAPRCGLIIEREIWPNLLAAARAANVPMALVSARFS
ARSLRASLRMGRVMREAMAGLQQVLAQTPADAQRLAAAGARAVTVTGNLKFDVDLPPAQCRAGHAWREAVGRPVVAIAST
REGEDALFLQAMRTLAAPRPLYLLIPRHPQRFDQAWEQAQTAGFKTVRRSALQAVPGSDIDVVVGDTLGEMPLYYAAADV
AIIGGSFVPLGGQNLIEACAVGTPVVTGQHTFNFEQATRDAIEAGAAERVHDARQALQLADQWVGDPALLQRRACAARTW
TQDHKGAVARSLAALQDMLAAQT
>AHV92715.1 aldo/keto reductase family protein [Bordetella holmesii ATCC 51541]
MATRVPSVPLNDGNSMPQLGFGVWQVPNDEASAAVSAALQAGYRSVDTAAIYGNEAGVGEALKTAGSPRDALFVTTKLWN
NRHQDARKALEESLGKLGLAYVDLYLIHWPLAGSTSFLDAWRDLLPVISTKSM
>AHV92716.1 hypothetical protein D560_3211 [Bordetella holmesii ATCC 51541]
MHRDLNELTLINSFAALPGAFYTRVLPQARVIRVCCMPMPMRPL
>AHV92717.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MKATHPASRYARAQGRELHYVEWGQADAPAVLLWHGLARTGRDFDDLAHVLSAEWRVICPDTLGRGLSQWSPKPRQEYQL
SFYVRLAEDLLDGLGIRQAAWVGTSMGGAIGMVAAATCLRQRLTHLVINDIGPTLPRPAMKRIQAYTGSPPAFTTVTELE
QWVRNAYKPYGKQTDEQWRRMTETSARRLPDGRITLHYDPAIVGQFELYPDDYERWPEYDSIRQPVLLLRGEQSDLLLED
TARAMTERGPRARLLSIADCGHAPSLNAPAQIEPVRQFLAQHRARGESA
>AHV92718.1 K+-transporting ATPase, A subunit [Bordetella holmesii ATCC 51541]
MNADFLGLLLLYLASLLCAAPLLGRHIRQAINGERTWLTAWGQPLERGLYRLAGVDPAAEMNWRRYAVAMLVFNVLGVLA
VYALQRLQGWLPLNPAGLPGVAPDSALNTAISFVTNTNWQGYAGESTMSYLTQMLALTVQNFVSAATGIAVLIALVRGLA
RHSTATLGNFWADLVRATLYVLLPLSFILALALVSQGVVQNLDPYVEAQTVQAQQYETARLDAQGQPMTGPAGQPLTDTV
VTRVQTLPMGPVASQEAIKLLGTNGGGFFNANSAHPYENPNAWSNLLEMLAILLIPAALCWTFGEMVGSRRQGVAILAAM
TVLFAGFAASAAYFEQQPTPALRQAEAALLADGGNLEGKEARFGVAATALFATVTTAASCGAVNGMHDSFSALGGVTPLL
QMQLGEVIYGGVGSGLYGMLAFAILAVFIAGLMIGRTPEYLGKKIEALDMQMVALVILATPALVLAGTAVAVLADAGRAG
VLNPGAHGFSEILYAMSSAANNNGSAFAGLSANTPFYNVLLGLAMWFGRYTIIVAILALAGSLAAKPRLPASVGGMPTTG
PLFVALLVGAVLLVGALTYVPALALGPVAEHLQP
>AHV92719.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MNKSFLACALALCATLSAVPVHAEQTVRLIVAFPPGGPVDLVGRVLAERLGKELGRQIIVENKAGANGNIGAAFVAKAPA
DGSVLFLTSVGAVAISPALYKELPYNPKEDFAPVSLVVNNATAFVVNPANPAKDAADFVQRSKGGAQSVAIGSSGVGSIP
NLTLEMFSDASHANVLHVPYKGAAPVINDVMGNQVAGFFGDVPGLIGHIQGGKLKVLGIAAPTRHPLLPQVPTLAEQGIA
GVESNNWYGLLAPAATPPQTVAKLNQAVRNALDDASTRQRLQAFGAEPAPSTPEAFATLIQKDREKWSSLIEREQIKPE
>AHV92720.1 single-stranded DNA-binding family protein [Bordetella holmesii ATCC 51541]
MASVNKVILVGNLGRDPEVRYSPDGAAICNLSLATTSQWKDKASGERREETEWHRVVMYNRLAEIAGEYLKKGRSVYIEG
RLKTRKWQDKDTGADRYSTEIVADQMQMLGGRDGAEGGGFGGGGGYDEAPRQQRAPAQRPAPAQRQAPAAAAPMGGGAAN
LADMDDDIPF
>AHV92721.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKRIFPAALLALTAWITPVEAAYPEKPIRMVVPFAPGGGADLTARVVADSLSKRLGQPVIVENKAGAGGVIGAGAVARSD
PDGYTLLYTTPGQQMTLPYLMKNMPYDPADLRPVSQVSLAPSVLVVNDKLGVKTLDELIALAKKRPGELNFVSAGIGASS
HLNGELLQILAGIKLQHVPYKGTGEAVKDLVAGNGDLAIDTVGIYTSFIKDKGLIPLGVTTTTEIPLLPGVPPMSRSLPG
YDASPVNYISVPKATPEPIVRKLARAIQASIAEK
>AHV92722.1 hypothetical protein D560_2776 [Bordetella holmesii ATCC 51541]
MAGLVFTGCTTTKAQDSGSATSQRQEINSGADNALSRLNQASPDAQALIQKAKGVLVFPSVVSASFIVGAQYGKGVLRVG
GKDVGYYSTTAGSVGFQAGAQSKAVILLFMTQEALDKFRNSNGWTAGVDVSVAVANIGANGRIDTISAQKPVVGFILTNT
GLMAGVSLEGAKINKLDL
>AHV92723.1 3-oxoadipyl-CoA thiolase [Bordetella holmesii ATCC 51541]
MTQQAFICDAIRTPFGRYGGALSSVRADDLAAIPIKALMARNPNVRWEEIDDIIFGCANQAGEDNRNVARMASLLAGLPI
EVAGATINRLCGSGLDAIGTASRAIRAGEAGLMLAGGVESMSRAPFVMGKADSAFSRSAAIYDTTIGWRFINKLMKAQYG
VDSMPETAENVADDYKVSRADQDKFALASQQKTARAQQAGYFDAEITPVSIPQKKGDALIVDKDEHPRETTLESLAKLKG
VVREGGSVTAGNASGVNDGAVALLLADEKAAARHGLTPRARVVGMATAGVAPRIMGMGPAPATRKVLAQTGLTLAQMDVI
ELNEAFAAQGLAVLRDLGIADDDARVNPNGGAIALGHPLGASGARLATTAINQLHRTGGRYALCTMCIGVGQGIALIIER
V
>AHV92724.1 hypothetical protein D560_1195 [Bordetella holmesii ATCC 51541]
MSATAPSPAARAALLQEIGPLPLNGQAWPDWVRILAWILLSALGVQLFSSAAQLPPGQLNLLLAVTVGLSFLGLGLVSWF
MQLSITTINDQGLHQSWFTRREVAWEDIRFARFVPWFFSKRLVVLTRRGRPVVFQGGTRELQAAFDKIAQLYRR
>AHV92725.1 hypothetical protein D560_2142 [Bordetella holmesii ATCC 51541]
MALSGASPSFAQTSTPAASEAAARSTAPELSLQASASAEVRQDTVRISLSVEVEGNDQAATGKRLTAALDEVVKRARGAK
NIEVRSGGYNVWPNTNPKGKIVSWRGQGEVVLESKDFEAASALAAKLADKTAISNIAFFLSREGRESEERKLLGQAAQAF
KERALAPANAFGFSGYRLAKLELGGGGGASAPMPRMMSAQMAKADAAAAPAPGVPLEAGEVTVSVTVGGTIVLQ
>AHV92726.1 ADP-glyceromanno-heptose 6-epimerase [Bordetella holmesii ATCC 51541]
MIIVTGAAGFIGSNLVRGLNRRGIQDIIAVDDLTQGDKFLNLVDCKIADYMHHEDVRELLRAGKLPRLRAVLHQGACSDT
TERNGRYMMDNNYRVTLEWFEYCQAQRVPLLYASSAAVYGASTVYVEDPANEGPLNVYGYSKLLFDQVLRTRMDKLTAQV
VGLRYFNVYGPHEQHKGRMASVVFHNMNQFLSEGHVRLFAGWNGYPDGGQSRDFISVQDVVDVNLHFLEHPQISGIFNCG
TGRAQPFNDVAAAVVNSLRAENGEQALPLEELVSEGLIRYIPFPDDLKGRYQSFTQANVDNLRAAGFTAPMRDVQTGVSE
YVRYWRARK
>AHV92727.1 periplasmic binding domain protein [Bordetella holmesii ATCC 51541]
MKLGSGGVGLLMAAGMLAFSSLAAAQGSIRIGEINSYKAQPAFLEPYRKGMQLAVDEVNEAGGIGGKPLELIIRDDNATP
GEAVRAAEELLSREKVDVLTGSFLSHIGLALSDFARQRKVFFLASEPLTDKIVWQEGNRYTYRLRTSTYMQVAMLVPQAV
ALKKKRWAIVYPNYEYGQSAVATFKALMKAADPDIDFVAEQAVPLGKVDAGSVVQALDDARPDAIFNVLFATDVTKFVRE
GNTRGLFKDRPVVSVLTGEPEYLDTFRDETPQGWIVTGYPWQFIDTPEHQAFLKAYEAKFHDYPRLGSVVGYSAIKSLAE
GMRRAGSADTEALIKAFASLELTIPFGPIQYRALDHQSTMGAYVGRLGLKDGKGIMTDFRYISGADVMPADSEVRTLHRP
D
>AHV92728.1 antibiotic biosynthesis monooxygenase family protein [Bordetella holmesii ATCC 51541]
MALHVIASFAARPESFKQVRELLISLIEPIRQDPGCIQCDLVTSADRPLELLFVEQWRGAPELERHLADPGIASVVQQAA
PMLARPFSLERFTPVG
>AHV92729.1 phosphate acetyl/butaryl transferase family protein [Bordetella holmesii ATCC 51541]
MNILLLDQRTVALVDTHVNDDPSAEQIAEFTIAAAEEMRRLNLAPKVALLSRSNFGSGSSASGAKMREALDRVRQQAPDL
EIDGEMHGDCALDEALRLRILSSSTLKGSANLLVCPNVDSGNIAYNLLKTAAGGNVAVGPFLLGANAPVTILTSSATVRR
IVNMAALTVIDANRPT
>AHV92730.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92731.1 periplasmic binding domain protein [Bordetella holmesii ATCC 51541]
MGGNPDQARQLVTRYLQRDKIDFFTGPIGSNVALAVGPALFAAKVPYLSNNPGPSQFAGSQCNRYWFGQSYQNDAFHETA
GKVAADRGFKKVFIMAPDYPAGKDALTGFKRGYKNAVGEELYTKLGQLDYAAEIAQIRAAKPDAVYIFLPGGMGINFVKQ
FVSSGLAQGTALIGPGFSADEDVIQAVGEPMLGMYNTAQWAHDLDNAQNKQFVEAFRKEYNGRYPSVYAAQAYDVIMAMD
AAVKQAGGKASDRDAVVAALQKADFSSVRGPFTYGKNHYPILSYYVRVVDKDGNGRITNKLAGKVFDNYQDVYVGECKL
>AHV92732.1 cytidylate kinase [Bordetella holmesii ATCC 51541]
MPVITIDGPTASGKGTIAHRVAKTLGFAVLDSGALYRLTALAALRADVAPQDESAVADVAKALDVRFDGPHVCLEGADVG
HEIRQESVGNYASRVAAYPAVRQALLERQRAFRRLPGLVADGRDMGTIVFPDASLKIFLIADVEARAQRRYKQLIDKGIS
ANLVDLLRDMRERDLRDTQRTVAPLAPADDARVLDSSALTIEQTVQAVLEYWRGSQA
>AHV92733.1 bacterial regulatory s, lacI family protein [Bordetella holmesii ATCC 51541]
MQILPPPKRIRRGSGRVTLADVAKVAGVSAQTVSRVLNNPKSVPEPMLDHVRAAIAQVRYVPNRLAGGLASGRSKLVAAL
VPAIASPVFQETLQALTQALATRGYQLMLGESGYDDADELELLENLISRGPDGIVLTRVVQSELARQRLAASGIPVVETW
DLTDHPVDMLIGFSHEKVGVAVADLLLERQVKAPAMISGNDPRAQRRRKGFTQRLIESGCIGAESDLPVAEVNAPAHFGD
GRRAMSELLKTGISIDGLYCSTDALALGALIELKEQNILVPDQVAVVGFGDLATSPYTSPPLTTIRIDGRRMGALAAQLI
FERASGDLVSPAIQDIGFEVVRRASA
>AHV92734.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELFVEVAKTRNFSRAAEKLGIPKSTLSRQVADLERSIGLQLLARTTRKVELTPAGQLYFDRCQRIVAEAQVVHEELQNL
LETPSGPLRVNLPADFGTEFLAECFVEFSLRYPDVDFYLDIASPEHATRVFQACDVAIQIGELPDSTQIARLLGKLPAYL
YASPDYLARRGRPQHPDDLIHHECMEFRVGHAGRVTRWPLTDGLHHIEITPGKRYSVNSVSMLRSLTGLGAGIAILGSVR
GDESRPLERVLPDWHAGPFPVYAVTDTRLLPAKTRIFIEFLMERLDMQGPGEKHSARLFPDTA
>AHV92735.1 surface antigen variable number repeat family protein [Bordetella holmesii ATCC 51541]
MQAYASRPEIIIDPGGVTPQALTVITEAVDAIARLAEDQDGGEITRLRRRARDATVAALATQGYFTAQVTLAPGTDVGGD
TWDISIQAGPRAVIRSVDLNFTGRVLRPEYAARVEQWRQAWSLKPGQPFINGDWNKAKAHLLDSVSSRDFLLATMTESQA
EVQADTAEVALSVTIDSGPLVRLGQLQTQGLKRVPESLITRYVRYSEGEPYNQDQLDDWQQELQSTAFFRGRSCRCAARA
ASFPMRRSATRLMVTSRRARRARAAWPPSSPRVMPRSRARPAPRLRRSTTRMAR
>AHV92736.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRVCGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV92737.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92738.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MQRRHLILGLSLAATLAAPLTAAHAEDNYPSKTIRLVVPFPPGGTTDIVGRLFADKLGKELGQTVVVENRGGAGGSIGSA
FLANSAPDGYTLGIATVSTHGINPAIYSNLAFDAEKDFTPISNLASVPNVMSVNPKVHAKNMGDFVKLAKSQPGKITYAS
AGNGSVSHMMGELFKMSAGVDLMHVPYRGVGPALNDTLAGQVDVLFDNLPSSLPHIQSGALVALAVASPQRVANLPNVPT
FAEVGLAPVNDSSWFGLVGPAKLPQAVTDKVYAAVVKVSADPDVKSRLEGLGAAPVGNKPAEFAKQISEEIAKNKRIAKE
ANVKID
>AHV92739.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MAQAAYSPALILLSIALAVLASYTALSIAARIVVEREGVSSAWLWVGACITGFGLWGMHFVGMLAFGLPLPWGYGRLATL
IALLIAIAFAALALWLMTQPGLARWERALGAVIVGTGIAGMHYTGMEAVRISSSFSWPLVLLCFAAAVFAAGLGIWRGTR
QRARPERASLRVWEAVAMGLGLSAMYYSGMASAVQGTDAGTPSLAVSAEGLAATILGLSVVLSLAAIKLSASYAKTTAKS
AQLASSLQEARHRLSYLNSHDSVTGAVNRRMFDKRLAAAIAASRAEGGLLALLVIDVDSFRAVNEAYGYPVGDEVLMQTA
QRLSQAAGPHDSFARLGGDEFVAVAVLPHTSYAGHVADNYLAALRQPFTVAGQDIRISASVGIAVYPHDGVDPHALMAKA
EAAKSYAKNLGRDRHAFFEPSMNAGSDRHLRVFEQLRLAVERGELRLFYQPKVKAQTAERVGVEALLRWHNGELGDVSPA
EFVPLAEQTGLILSLQTWVLDEACRQLAAWDRLGADIPTVAINIAALQFQQNDFVDSIAAALKRHGLPAKRLVLEITETT
AMKQAAQSVKIMRRLYAMGVGLSIDDFGTGYSSLSYLKRFPARELKIDREFVMELTQDSEDVSIVAAIVAAIVALAHALR
LSVVAEGVETEAQRRLLIDLGCDVLQGYLTGRPAAAWTFDPEAAAMLAPQPAG
>AHV92740.1 mraZ family protein [Bordetella holmesii ATCC 51541]
MDAKGRISIPTRHRDALVSQAEGRLTLTRHPDGCLLVYPRPEWEKKREQIAAFPMSARGLQRLLLGNAQDVEIDGSGRVL
IAPELRNASGMTRDVMLLGMGAHFELWDAASLARREAEDMAQGMPDVLNQFSF
>AHV92741.1 tripartite ATP-independent periplasmic transporter, DctQ family [Bordetella holmesii ATCC 51541]
MPLAIEDWLAVILLAALALITFGNVLVRYLTDQSFAWTEEISVFLLIVLTMAGGSLAFVRNHHIRIEILADNGSPRRQRI
LGLISNVCVLFFFALLTVLSTRLVYD
>AHV92742.1 putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Bordetella holmesii ATCC 51541]
MAKQTTLTVYTALEADQIKAYQAAFEREYPDIKIQWVRDSTGIITAKLLAEKNNPKADVIWGLAGTSLGLMDKEGMLQPY
APKGLDQISPTMRDAKEVPAWVGMDAFAAAICFNTIEAKKQNLPEPKSWQDLTRPEYAGKIVMPNPASSGTGFLDVSAWL
QMFGEEKGWAFMDALHKNIGSYTDSGSKPCNLAASGEFPIGVSFDYRAAKLKAEGAPIQPVFPSEGLGWEVEATAIVRGT
KNMEAAQSG
>AHV92743.1 ribosomal protein S16 [Bordetella holmesii ATCC 51541]
MVVIRLARGGSKKRPFYNLVATDSRNRRDGRFVERVGFYNPVGADGSENLRIALDRVKYWTDNGAQLSPAVERLVKGYSA
KVSAAA
>AHV92744.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV92745.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKRILAGLCTSVALASAAHAAYPDRPIRLIVPFPPGQATDIFARALAEKLGTDLKQTIVVENRAGAGSNIGMAEAARAKP
DGYTLVIAGSAAAVNQTLYKNINFSLTQDFAPVSGVFSVPLVFLATPASGITSIAALVERARAQPGDLVYASAGIGGTQH
LAAEMFKAAANVDVRHIPYKGSGPAQADFLGAQVPLMVDSVTAALPHIQSGKAVPLAVTTSKRLAQLPDVPTVAESYPGF
EAIGWAAVLAPAGTPDDITGSLSKHIGQVLTSPEMSKFFTDRGAQAMPSSPKATADFVAAEVGKWGEVVRRSGAEVD
>AHV92746.1 hypothetical protein D560_0037 [Bordetella holmesii ATCC 51541]
MSRRACFCNGSAAHHARPCFDKCKFRAGSGYQKSSGKQLIWRHFF
>AHV92747.1 hypothetical protein D560_3026 [Bordetella holmesii ATCC 51541]
MPAKRSEDIAKDKLIDSVKSSLNDAETLLREAAASSGEKASELRERALSSLKRTREALYDAQDAMLERGRRAARATDDYV
HDNPWQAIGIAGVTGLLLGLLISRR
>AHV92748.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIP
LRGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV92749.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Bordetella holmesii ATCC 51541]
MEFEHRPVLLEPTVDALLQADFGGRGASRTRPRDEAAAESRRAGGTFVDGTFGRGGHSRELLSRLGPQARLVVFDKDPQA
IAVAQALAAEDGRVQVVHGGFATMAEALMDRGIEQVDGVMLDLGVSSPQIDDAQRGFSFMRDGPLDMRMDTSRGPTVAEW
LAQASVEEMREVIADYGEERFAFQVAKAIAARCATRPLRTTLELAECVASAVRTREKGQHPATRTFQALRIYINRELEEL
ARALASAIELLAPGGRLAVISFHSLEDRMVKQCIAAAARPAAAHPRLPLRESELPQPILQSLGKVVADDEEVAGNARSRS
AILRAAERTAQSLPADGAAGFVPAVPGAAPAAKGRRR
>AHV92750.1 cytochrome o ubiquinol oxidase, subunit I [Bordetella holmesii ATCC 51541]
MFGKLTLEAVPYHEPIVMVTLAAVALGGLALLGAITYLGKWKYLWTEWFTTVDHKRIGVMYIIVALIMLLRGFADAIMMR
TQLAVASGDSTGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNLIVPLQIGARDVAYPFLNSLSFWLFSAGVVLIMMSL
FVGEFAATGWLAYPPLSGLDYSPSVGVDYYIWALQISGLGTTLSGINFVVTILRMRAPGMNLMKMPVFTWTALVTNILIV
AAFPVLTATLALLTADRYLGTHFFTNDGGGNVMMYVNLIWIWGHPEVYILILPCFGAFSEIIATYSRKPLFGYNSMVYAT
AAIGVLSFLVWLHHFFTMGAGANVNAFFGIATMIISIPTGAKVFNWLFTMYKGRVQMTTPVLWTIGFMVTFVIGGMTGVL
MAIPAVSFVLHNSLFLIAHFHNVIIGGVVFGCIAAMTYWFPKAFGFKLNERLGRYSFWCWFIGFYLAFMPLYILGFKGMT
RRLNHYDNPEWQPYLIVALVGAFFIALGIWFLLQQVVVSIRDRKQNLDLTGDPWNGRTLEWATSSPPPFYNFAHVPHVDA
LDQHWEDKERGIAYVQPKKYEDIHMPRNTGAGIYISAFGLVMGFALIWHIWWLAAVGLVGMIGCFIARVYDRDVDYYVPA
AEVERIENEHYANLQKAA
>AHV92751.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQARGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92752.1 bacterial sugar transferase family protein [Bordetella holmesii ATCC 51541]
MAALALALMLTLGRPVIFRQWRAGRGGAAFALCKFRTMRQPRFDGEPDEARLTRLGRWLRRSSLDELPGLWNIVRGEMHF
VGPRPLPLAYLPRYSAEQQRRHLVPPGVTGWAQVHGRNALDWPTRLQLDVWYVDHHNWRLDLLILWRTIWVVLGGVGIGS
PGQATGEEFRGQQETGESS
>AHV92753.1 hypothetical protein D560_2447 [Bordetella holmesii ATCC 51541]
MNNDIIAGKWKQLTGKTKAAWGELTDDELTRTEGNAERLAGLIQERYGKTKQEAQKEVSDFFDKNR
>AHV92754.1 SET domain protein [Bordetella holmesii ATCC 51541]
MRRSKLHGNGVFAARKIPAGTRIIEYGGQRISAAEADRRHPTNPDDPFHTFFFALSSGKVIDGGDQGNDARWINHSCTPN
CEAQEGRHGKRVYIVALRDISRGEELSYDYGLVLDGRITKALKQGYGCRCGTENCRGTMLALPKKKGSSRNSVEPCLIAV
TLDP
>AHV92755.1 marR family protein [Bordetella holmesii ATCC 51541]
MLRVHGVPLRQGVLADEIGVEGASLVRVIDALETAGLIERLADPEDRRARCVTLSAAGQAKAADIAHIVDRVRADVVNGI
DPAELRIAERVLRAIQQRLETLNTSDSQA
>AHV92756.1 arsenate reductase [Bordetella holmesii ATCC 51541]
MSSTHSATIYHNPRCGTSRTALQALQDAGYAVTVIEYLKTPPSRQTLAGLIRQSGLSVRDAIRSKEPLYQELGLDDPQRS
DDDLLDAMVEHPILINRPFVVTEKGARLCRPAEVVQQIL
>AHV92757.1 SWIB/MDM2 domain protein [Bordetella holmesii ATCC 51541]
MATPSKTATPRKPNAAFMKPLTPSAELAAVIGSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLLPIFGKDQVTM
FELTKLVNAHLK
>AHV92758.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MKTSVDSSAAAAPERTAWGSIALFCVLWSSAFAAAKIAVRDCPPLTLLAVRFCIAGVLMMGMAALTGGLRLPSRRDLAAL
IGLGLLNNALYLGLSWSGMATLSSAFTSVLISTNPLLIGILAGPVLGERLGWRKLVGLLLGLAGVVVMLRSRLAGAGAHE
DVHGTLLVLGGLIALVAGTLAYKKLKPAANLWMATGVQALAAGVALWPFALHYETLEQARLTLSLVLSMSYTIVAVSMGS
YYLWFLILGRSSATSASALHFLMPPLGLFFGWLVLREPVSWLDMLGIVPIAFGIWLATRRNV
>AHV92759.1 putative FMN-binding domain protein [Bordetella holmesii ATCC 51541]
MYIPAHFNHEDRAALNALMREFPLGVLITGGRSGLDANHIPFELDETAGASGVLTAHVARANPVWQDVADGDEVLVVFRA
EQGYISPSWYPSKHEAHQQVPTWNYRVVHARGRITIMDDERFVRGVIARLTRRHEAGEPRPWKMTDSAPDFAEGMLRAMV
GIQIEITALEGKFKLSQNKEVRDIEGAAQALIERGSPGLGQRMQACADSKARAD
>AHV92760.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92761.1 hypothetical protein D560_0328 [Bordetella holmesii ATCC 51541]
MSASAKPPAALARFSEPELEMLAKTADALSAYLGQPVLAEVAESEEGTEWAAFGVALDAQATQEDDRPHMQMGGPGARIL
GGRGGLPDTAAQTYDCLYLWAIQISMTEGERFIKLDQEGEECAWSDVLSDVLPFDLSENAEDILDEDEADDDEDDDHAHR
DHGRHDHRH
>AHV92762.1 prolyl oligopeptidase family protein [Bordetella holmesii ATCC 51541]
MSFAPAAGTPAATTIHTDTQGLSQGDFELPVAGGTQQAYYAAPADVKGAPLVLVVQEIFGVHEHIKDVCRRLAKAGHFAV
SSNLYQRQGDASAYTDIAKLVAEIVAKVPDEQVYADLDAAVAWAATQGADVLRLGITGFCWGGRITWMYAAQNPKVKAGV
AWYGKLASGHGPLITSVAFDIADRLHGPVLGLYGAQDHSIPLEDVRTMQAKLAEGNAASKASHFVVYPDSGHAFLADYRP
SYNAADAKDGWARMLSWFDRYLTT
>AHV92763.1 hypothetical protein D560_0157 [Bordetella holmesii ATCC 51541]
MRTPLLFLFGMALPAAGMAASLSSTIDAVTVYQDRAVVARHASVDLPAGEHELVFDKLPATLQDNSVQIAAKSKGQATLL
DVRTGSALTAENSNERLRAVDEQVRQLQARLAGLEDEAAVLDNQREWVMLVQRGAAEPARDGSRLSLEQLNGIQAASAQT
LSGALAGLRRVAAEREQLGRELAVLQDSQQQLRGDLGRRNKAVTLRLKLAQAGKVDLGLSYAVPGARWTPAYDVRLGKQD
GHVELTYFGVVQQNTGEDWSKVRLTLSTARPALGGAAPTQHPWILDQAVAPPPAPVAALSYERSHSARPASEADDAAELA
QAKVHNEQTSASFAIDSPATLPSGSATQRVAITTASLPAQLQYEAVPALRETAYLTARVSNATDYPLLAGSLNSFLGDAF
LATSKIPTVMPAEQVDLALGADEGIAIKRTLLERKTENTGFSGNGRRQTYEYRFTIKNNKSSDAQVVFSDRLPVSRHEKI
VVKLIGASDAHKGEDGKLTWNWTLHPGQSRDAVLKFSIDYPGDMAVSGL
>AHV92764.1 carbon starvation CstA family protein [Bordetella holmesii ATCC 51541]
MLAAQMGYLPGMLWILAGVVFAGAVQDFTILFISTRRGGRSLGELVREELGTVPGVIALFGAFMIMVIILAVLALIVVKA
LTHSPWGTFTVAATIPIAIFMGIYLRYIRPGRIGEISVIGFVLLMAAIIFGQNVADSPTWAQHFDFDGVGLTWVLIGYGF
VAAVLPVWLLLAPRDYLSTFLKIGTILALAIGILIVAPELKMPALTKFVDGSGPVWSGNLFPFLFITIACGAVSGFHALI
SSGTTPKLIENETQARYIGYGGMLMESFVAIMALVAACVIEPGVYYAMNSPAAVIGTTPDQVAQVVSSWGFVITPAELVQ
TAKDVGESTIISRAGGAPTLAMGMAHILHQVLGGPALMAFWYHFAILFEALFILTAVDVGTRAGRFMLQDLLGTFVPSLK
RTESLPANLIATALCVAAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAAVALMLGTVVLFKMKRDRYAWVTILPTLWLL
ACTLTAGWQKIFDADPKVSFLAHAARYNAAIAEGKVLAPAKSLQEMSRVVMNDYINASLCGIFMFVVISVVVFGIRSVMR
ARASSQPTDKETPYQPMPAAPAASSH
>AHV92765.1 putative required for the error-prone processing of DNA lesions along with dnaE2 and imuA [Bordetella holmesii ATCC 51541]
MLLPEAHPQGTWLQGLGCHSLADLRALPRGGLQRRAGPALLQALDLAYGQASEAHRWFEPPPRFDARLELLDYVEHAHAL
MDVAARLAEQLSGWLHACRRAVRAVTLTLEHERGRRACPPSLLTLSMAEPVWHSRHLLGLLRERLERLELAAPVIAVALS
AHETVEPGTASATLFPEPGGNAADHARLLDLLAARLGPQALRRPAPQADHRPEVANHWQPAHHHVRVRDSLPTGPLDRPC
WLVEPARALAEQAHRPVYQGQPLRLLRGPERIESGWWDATQTQRDYFVAEDQAGARYWLYREHGQHWFLHGLYA
>AHV92766.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELRQLEAFAAVMSSGSITAAGRLLGRSQPSITRSIQELEAEIGYPLFLRSGPRVTPTEQGFLLYEDVAHALSSLRHIQT
RAHDIAQGKQQPLRLAATSALAAGLLPHAIARAEANYGVRAMQVRSVSPEQVLHAVLTGSAQLGLTSLPLEHRGLDVHWI
GQAACVVALPDVDPLAQHATVPVAALAGRRFITLANPYRLRGRLDRALAQAAAGLIESNSSLNALAAVRAGLGVAILEPV
SALGLPVQGVAIRAIDQNIPFFFGVVTPQSTPIAPTVAAMAEALAQTAATLLPGFIRHEASAHAGLLHSIHGKDDFSTDP
I
>AHV92767.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MFPEWIPAKSVRGVIDEFVDHLVTNYADTLEALASPVLKVLVWLEQLLRTSPWWAVVLATVAIAWLVSRRIGLSVAMGAL
LCVIGFLGLWDAGMQTLALMIMAAGLSVIIGIPLGILMARVQWLRSVMLPVLDVMQTMPSFVYLIPVVMLFGLGKIPALI
ATVIYAVPPLIRLTDLGIRLVDHEVLEASRAFGANSRQQLFGVQLPLALPNIMAGVNQTTMMALSMVVIASMIGARGLGY
EVLLGINRLEVGRGLLAGLGIVVLAVLFDRITQSYGQRVRAGGHR
>AHV92768.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MSFKSLEVFYWVVTLNSFNKAAAKLHTTQPAGSQRVATLESQLGIKALDRTSRTIKLTAKGRVLYDYAERFMALHSEMMQ
KVAEEQAVSGVIRLGVAETIVHTWLVEFLEQCRKRYPSVTIDFVVDITPALREELKSGALDMAFMLGPTHDDDLVETALC
SYELNFLSAPGLRLGKEPLSNSDIAAHPLITFPRRTYPYTFLRQELTTPEHGAPRIFTNWLLSTIVRMAEDGYGICVVPR
LAVLKEVEQGRLKVRSTQLALRDLSFAVAYARGSDEPTKAALAALACEIAKASTVGHRRRRRPAK
>AHV92769.1 ftsK/SpoIIIE family protein [Bordetella holmesii ATCC 51541]
MPRISNATPRASRNTRNGPSPFQARISALLREARWILFAALAAWLTLVLATWSPADPGWSHSVSGDAIHNGGGTLGAYLA
DILLYLFGFSAWWWVVLLLHRVRAGYRRLASNLRVTSGKQPDALPRVHWEEGIGFVLLLTCSLGIEALRLYSWGMHLPGG
TDGESGAGGVIGQMLAGWLSRGVGFTGGTLALLVLLAVGLSLFFSFSWLQIAERVGSWLEGLVRRVRDSYAAREDRKVGE
VAKAVRTEQVVAKQEKLVHEQPVRIEPAITVVPRSDRAEKEKQQSLFAPPAGESDLPAIGLLDPPLQNQETVSAETIEFT
SRLIEKKLADFGVSVVVVAAQAGPVITRYEIEPATGVKGSQIVNLAKDLARALSLVSIRVVETIPGKNLMGLELPNPRRQ
MVKLSEILGSQTYHASHSVLTMALGKDIAGNPVVADLAKMPHLLVAGTTGSGKSVGINAMILSLLYKTDASHTRLILIDP
KMLEMSVYEGIPHLLAPVVTDMRHAANALNWCVGEMEKRYRLMSKMGVRNLAGYNSKIRDAIKREEPIPNPFSLTPDAPE
PLQALPHIVVVIDELADLMMVVGKKIEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRT
ILDQMGAETLLGQGDMLYMPPGTGLPVRVHGAFVHDDEVHRVVEALKAQGEPNYIDGLLEGSEGETGDGLSSVTGMGDAE
SDPMYDQACEVVLKHRRASISLVQRHLRIGYNRAARLLEQMEQAGMVSPMQSNGNREILVPAREEA
>AHV92770.1 prokaryotic diacylglycerol kinase family protein [Bordetella holmesii ATCC 51541]
MTPHPSPYKSTGGLRRILNALRYSWQGLKAAVKYEAAFRQELALAVLLIPAAFFLGRTTDEVFMLIASVVLVLVVELINS
AIEALADALSVETHPLLGRAKDLGSAAVMLMLIFTGAVWVAVAISRFILN
>AHV92771.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MNITLKQLRVFCALYELRSFTAAARAAFVTQSAVSKLCAELEAEVGQPLFERSTRSITPCDGAADFYAYAQEILGTVRAA
ERSMSGLRSLERGRVGVATSPLMMVGLLGDVVVDYHRAHPSVALDLFELSTDDTIEHVRNGRADFGIVSLETPAQELSTR
VIYRDTMFAVCATHHPLAGQEAVTWAEVAAQELIMLRNVYSVRRSLDRVAADLRLDFDYRIEAGMLTSVLKLVGAGLGIT
VVPGYARGLARELGLRVLDIDGARRHGHELWLIQRHNARLSMAASAFLHDTEQALRQREARED
>AHV92772.1 ABC-2 type transporter family protein [Bordetella holmesii ATCC 51541]
MSSSEPLVQPRLDAGSGFPTLLRKELLRFWKVGFQTIAAPVITAVLYLLVFAHVLEGRMMVYGSVPYTAFLIPGLMMMSM
LQNAFANPSSSLIQSRITGNLVFVLLPPLSHREIFAAYVIAAIARGMAVGVCVWLVAMFFVPLVPVQPLWVLVFAVLACG
IMAVLGVVAGLCSEKFDQLAAFQNFLVMPATFLSGVFYSIHTLPPFWQAVSHWNPLFYTIDGFRHGFFGISDVSPWQSLA
VVAGVFVVLSLFALRLLARGYKLRN
>AHV92773.1 doxX family protein [Bordetella holmesii ATCC 51541]
MSFGNFLRARQLEPALALLLLRLWTGLEFARAGWTKLSGGLQAPAWFRGLDFPVPHVWLPANLNWVSAGVLELALGVALI
VGLCTRWAAAALIYIVFVAVYSVHFDLGWAGWNQIETDEGLGFKVPLMLALMLFALFACGAGDWSLDRRLGRCRQRRGG
>AHV92774.1 phenylacetic acid degradation protein paaN [Bordetella holmesii ATCC 51541]
MSQDFFERHQPVLEKALAAARERGYWSPFSESPSPRNYGETAAQDGQAAFDALLGKEFALTVSGAEGTVGGEVSPFGFAL
NITYPRVSPERLLANAEQAGQDWRRAGPRAWVGVSLEILARLNRRSFEMAHAVQHTTGQGFMMAFQAGGPHAQDRSLEAV
TYAWQAMSRIPEVAMWEKPQGKNEPIKMEKRFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNTVIVKPHPAAILPLA
LTVQIAREVLVEAGFSPDVVQLAAHPAGDDTAQQLALAGAVKIIDFTGSTANGDWLEQNARQALVYTEKAGVNQVIIDSV
QDIKGAARNLAFSLALYSGQMCTAPQNIYVLRDGIETAEGHLSFDDVAAAIASAVEKLSGDAARAVELTGAIQSDATAER
IDRARALGLPVLADSRSLTHPQFEHARVRTPLVLSAEADDSRIFQEWFGPISFFVATDSTDHSIALARDTVREHGALSLS
AYTTDDGVADRIQEAAEVAGVALSLNLTGAVFVNQTAAFSDFHGTGANPAANAALSDSAFVANRFRVVQTRRHV
>AHV92775.1 ribonuclease III [Bordetella holmesii ATCC 51541]
MSLATLETRLGHHFGDQALLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYAKLDEGDLSRVRANLVKQASLAD
IAQRLDLSLYLRLGEGELKSGGFRRPSILADTVEALFGAVFLDAGFAAARTVIERQYDPVLASVDPQTLGKDAKTLLQEF
LQGRKMALPIYTVVATHGAAHSQQFEVECAIPALEIKVTAGGASRRAAEQSAAKLALEAAQAVSPRVARKGGRARKTAQL
SLPVAVAQEVK
>AHV92776.1 hypothetical protein D560_2801 [Bordetella holmesii ATCC 51541]
MTLLADSPLIITVAPNGAYKTERDHPAVPMTPAALATEARACLEAGAAMMHMHVRTPEGKHSLDVQAYRDALAAVEGAVG
SEMLVQVTSEAAGVYQAAQQMAMVRELRPEAVSIGLREIAVPQISEQELASFFAWIAAERIMTQVILYSADDLARWQDFR
ARGLVPEGCWALLYVLGRYVAGQQSSPQDLLPFLQVDGQTLSWAICAFGRQENACVTTAAALGGHMRVGFENNLLLRDGS
TAPATAPWWRKPPKAHAYWGAPGHRRAGARDLRRAGLKPHQG
>AHV92777.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MVRFSEWLPRWLGFDNLLLANVLAFIVSAAIMFLLAVVIERFVLRHLVNQDLTTLLMATLGISYFLDGLGQITFGSSVYS
INVGMPKEPWLVLDSVFEGGVLINLEDLTAALIAALLVAALALFFQFTSTGRALRAVADDHQAAQSIGIPLNRIWVIVWS
VAGLVALVAGIIWGSKFGVQFTLSTAALRALPVVILGGLTSVPGAILGGLIIGVGEKLSEVYLGSLVGGGIEIWFAYVLA
LVFLLFRPQGLFGEKIIDRV
>AHV92778.1 hypothetical protein D560_0709 [Bordetella holmesii ATCC 51541]
MPWTDVLMAKVLRGDLDPRHWAVQAGGVRALAAALEAARA
>AHV92779.1 hypothetical protein D560_3563 [Bordetella holmesii ATCC 51541]
MKTLTSALLMSMAMLSTGAYASQNIEPNNVPFQGVYGQQEQGKSNAQVQQELANAKATGQYTFGENDYPPATAMATSGKT
RQQVRDELAQAKANGDYTFGELDYPPHTN
>AHV92780.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MFLTLGAACAPSLAAMDFPARPITIIVTFPPGGGTDLLARKLGAALQQDLGQPVVVENRPGASGNIGARAVAESRPDGYT
LLMVNSSFAINPGVFHHLDFSPERDFTAVINVAFVPSVIVTAANSPLSSLSQALRLGLPQDPMPYASCGNGTPQHLAAEL
LRARAKASLQQVPYKGCGPALTDVLSGHVSLGVITASSAAPFIRSGKLRALAVTAAQRSPLLPDVPTVAELGWPGYELDQ
WHGLLAPAGTPPQIIARLNHALTTIMMRPAMQAELKELGFNPVASSPADFDRLVHDDICRFGALTANMGLRVD
>AHV92781.1 aminopeptidase N [Bordetella holmesii ATCC 51541]
MRTDTPVTVYRKDYQPYPYAIPEVALRFELDPECTRVTATLQLQRKPEAQADAALELDGEELELVSLRVNGQDWPTRHYQ
LGEHQLHVHGLPAACTLEITSRCRPAVNSTLMGLYVSGGNFFTQCEAEGFRRITWFADRPDVMSRYHVTLLADSRYPVLL
SNGNLLATRQLPDGRQEAEWEDPFPKPCYLFALVAGNLTHREKRVETCRGRNVLLQVYSDPGSEDRTEWALESLERALRW
DETRFGLELDLDRFMVVAVRDFNMGAMENKGLNIFNAAYVLADPQTATDVNYEGIESVIGHEYFHNWTGNRVTCRDWFQL
SLKEGLTVFRDQEFSADMMARDMTALAAASARAVKRIDDVVTLRAAQFPEDAGPMAHPIRPDSYQEIGNFYTATVYEKGA
EVIRMQHTLLGEAGFRAGMDEYFRRHDGQAVTCDDFVDAMDSVYREQYPGRDLSVFRNWYRQAGTPCVAVRLAHEAATGR
LTVTLSQRCAPVGVERRAGAAAKQAFHIPFAMGLLDRQGKAVPVMLSGAPARETVLLELRQETESWVFDGITVPVVPSLL
RGFSAPVIVEYDWSDAELALLSAHDKDPFARWEAGQELASRQLLALAARQQAGQPLQADPAFIAAWRALLIDPSIDAAYR
ARVLALPSEKTLAERMQAIDPPALTVARDFLRAELGRQLAGEWVAAFEANQVAGPYSPAPGPAGQRALKNQALAHLMAAG
VDDAQTRAQRQYEQADNMTDSLAALGCLVNFAPGPVAQAALTRFYERWQDDPLVIDKWFSLQATARSTGVTEVLALMRHP
AFTLRNPNRARALVFQFCLTNARGMHVPDGSGHAFWADQVLALDALNPEIAARLARAMDNWSRFTPALRKSMHTALERVR
SQQGLSRNVAEIVSKSLEFSA
>AHV92782.1 pfkB carbohydrate kinase family protein [Bordetella holmesii ATCC 51541]
MLSDYAKGALARVQAMIVAARARNIPVLVDPKGDDYTLYRGATLVTPNRSEMQQAVGRWASESQLTERAQALRTELDLEA
LLVTRSEQGMTLFTQNGREHVDAQAHEVFDVSGAGDTVLATLAVMRAAGLSWVDAMRWANRAGGIVVGKLGTSIVTGTEL
AGEAI
>AHV92783.1 bacterial regulatory s, luxR family protein [Bordetella holmesii ATCC 51541]
MDADHELRIASALYAGITDTDQWRQALILAARAVGTDRCTVLARNVDTESILVIDNAGLSAAALDEYERHYYQMDSFMEA
ARNVPTGGCLRDDEAFGPGGIRRSEFYNDFLYRHDIGSLMLTQAVRTPDIEWTVAFQRSPGHTHFEHQHANALGRLVPHL
QKALQLRLRLRELERRASLGEAALDTFGTPLLFIAPSGRLLMANLAGEAWYSRHGKQLEHTAQWSRVLAAATGSIGPAVA
EGMRLPGGGHIVALPAPQAYRNSDVQGPGLALVMVHTHLNPSPPARSMLKSLFGLSAAESRLLEVLMAGATLSQAAQQLG
LSVETVRTQSKAVLQKTGTQRQAGLMRLVSALQSPMPAH
>AHV92784.1 glutathione transport system permease protein gsiC [Bordetella holmesii ATCC 51541]
MIRYAIKRLLLAIPTLLAMLTAVFVLVRLVPGDPAAVMLGDQASAEALAALRLRLGLDMPMYEQYLRFLGDMLTGNFGVS
MASGRTVLQEVALVLPWSLQLTAAAVLIGVVFGLPLGIWAALRRNAWPDYLGRLLSLTGLSFPAFVSAILMLLVFAIELR
WFPVIGSTTGGDWSTQLRNLTLPAFNLGLIMMAYVMRVTRSSMLGVMGEDYVRTARAKGVRPLRLILRHGLRNALIPIVT
VVGLYFGTLIGNSVLTEIVFNRPGLGKLILGALNTRDYTLLQGLMVVFASCVILVNLLTDLVYGLVDPRVKYK
>AHV92785.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MQLAGGSLRFLRAERMPEALSPGWKLVLLLEGRLRYRVGGGRVTTVCGPAVHHSLCREPWSMEHEFDSQSQLRFVSVRLP
LDALACSCGLDGDELAYRLGAGTDAYAESNRAAPPGLMALARQMLDCPVPDALRELYLSAKASELAALSLAALLPRPASS
GLSPADCERLHQARDQLLAHLQQPPSLPALAAAVGINVNKLTSGFRRLFGQSVYAFVRQARMAQAHALLAEGRLTVSQAA
YACGYTDSHFSKVFHLHYGVLPRDVAR
>AHV92786.1 RNA methyltransferase, RsmD family [Bordetella holmesii ATCC 51541]
MKQSASGARAIRIVGGQFRRTPITVPDVPGLRPTPDRVRETLFNWLNHLWHADFHDKRVLDLFAGSGALGLEAASRGVAQ
VQMVERDRAAVSALRTLRDKLKAEQIRIHAGDAMEVLSRMDASRFDLVLLDPPFGQGWLERIWPLLPAVLDDAALIYVES
EAPIAAPRILSFYATVKPELSITVCSSLLHCGKRRIIRVRRMVLHHKQTRFGSLHDHCRIPRHVRPADARSRRLGAPRRC
PVRQSGRGGGVQPQ
>AHV92787.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MNEYPPGRIVADRQGGVLRVRICNPARFNAMSLSMWQALHTAVREAQADETLRAIVLHGEGDRAFVSGADISEFGQQRND
PAQVARYDQAVSAAQNALADSRIPTIAVIQGICMGGGMALALACDLRYCNASARFRMAAARLGLGYALDGVKRMRDMLGA
ARTMDLFLTARTFDGGRPQG
>AHV92788.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLRAKDLFITFNAGTPIETRALRGMSLDIPTGQFVTVIGSNGAGKSTFLNAVSGDLPIDSGNILINDVDVTRQPVWARAT
QVARVFQDPMAGTCEDLTIEENMVLAQCRGKRRGLSRAVKASMREHFRERLATLGLGLENRLGDRIGLLSGGQRQAVSLL
MAALQPSRILLLDEHTAALDPRTADFVLQLTARIVAENNLTTMMVTHSMRQALDVGQRTVMLHQGQVVLDVSGDARKGMD
VPDLLAMFERVRGEKLADDALLLG
>AHV92789.1 tim44-like domain protein [Bordetella holmesii ATCC 51541]
MSIKFGLSRVLAAALIAVSGAALITASFDAEARRAGGGSSAGRQSSNVTTQRQATKPPATPGAGTTAGATSAAAAKSGAS
RWLGPIAGIAAGLGLAALFSSLGLGGALAEFLGSALLIGLVIFAVLFLVRRLRGAAPRQAMQGAYSSAGSPPAQQNSQPA
WRESLAAAPAAAPAASVAAAPVAASLPKAGDDGNWFIPGDFDTPRFLQQAKEQFVRIQGIWDSGNVDNLRDLLTDDLIAE
FKPQLEARGTEVNKTEVVLLNAELLGIETVSDGHLASVRFSGMLRETPGAEAFRFEEVWNLFKPTSGGWLLAGIQQIPVE
YAN
>AHV92790.1 phosphoenolpyruvate carboxylase family protein [Bordetella holmesii ATCC 51541]
MIQACEGKRVFDTIETLRRSAVRFRRQGREEDGQLMQQLVKQLRSDDPNLVARAFSYFLHLFNIAEDRDQNRRKRARALT
DPAAAAGSLRQTVQLLHAQGVTAARIRRLIGEACVMPVLTAHPTEVQRKSTLDAHREIAALITQRDQPLTHDEIAEIDSA
LLGRVDTLWQTRMLRNTRLTVADEIENALSYYRSTFLAAIPRLYADLSRLLGQEAANPFAAPPAPLEPFLRMGSWIGGDR
DGNPNVDAATLDLALLRQATVVFEHYLNEIHALGAEVSVSTLLIDAGDALQELADAGGDTSPHRRDEPYRRALIGIYARL
AATARTLTGRELALRAALPAQPYPHPQAFAQDLAVIAESLASHHGTPIAKLRLSGLQQAVEVFGFHLATVDLRQSSDVHE
RVLTELLARAAQDDPGPSYDQLDEEARVQLLRRELATARPLASPWITYSEDTTRELAVLRAAAAARARYGRAAVRQAIVS
HTETLSDLLEVLVLQKETGLISPAGTQPQPEDGLMVVPLFETIPDLERGPAIMAAWLDLPEVRQRVRLAQNESQEVMLGY
SDSNKDGGYLTSNWSLYRAERELVDVFRARQVKLRLFHGRGGSVGRGGGSSFDAIVAQPPGTVAGQLRLTEQGEVIQTKY
KNADIGRWHLELLVSAVLQASLAQQPAAARQAEDAHMAHHGQTMDFLSASAQTGYRKLVYDTPGFDDYFFAATPINEIAG
LNIGSRPASRKQGQKIEDLRAIPWGFSWAQCRLMLTGWYGMGSALQAYLEEGATGAPRSKRARLAQLREMARDWPAFRTL
LSNMEMVLAKSDLAIASRYAMLVPQRGLRERIFGAISDEHGRTLAMLKLINQRDLLADNPALAASLRERFAYIDPLNYLQ
IDLLRRQRASQRRPDAKADPRITPAIHLTINGIAAGLRNSG
>AHV92791.1 glycine betaine/L-proline transport ATP binding subunit [Bordetella holmesii ATCC 51541]
MSKIEVKNIYKIFGPHPQKCLKAAQDGISKEALLAETGHTLGLRNISLSIDEGSIFVIMGLSGSGKSTLIRHFNRLIEPS
AGQILVDGVDVVSLNKRDLEAFRQKKMSMVFQRFGLFPHRTVLDNAAYGLAVQGVSRAKREERARHWLDQVGLNGFESQY
PHQLSGGMQQRVGLARALATDAEILLMDEAFSALDPLIRREMQDHLLQLQAKLNKTIVFITHDLDEALRLGNRIAILKGG
ELVQEGTPEDILLSPANDYVQAFLQDVNRTKVLNAAHAVNPSRLTLTMRSRPAHSLERMQALNYEYAPVLGGKRLAGILT
GQAAMLAQQEGARDVSRYVEDLASVPATAGLDQVLSQLVHSDQPLAVTGEDDEFLGMLSRKKVVELVAPVVAESNEAAVS
AEPAAPLDPADPEKLPN
>AHV92792.1 hypothetical protein D560_1532 [Bordetella holmesii ATCC 51541]
MNTTVTQTPVEIATEFFDRYRDHDVPGMSDLCTDNANFEYIPFEVWAKQRVVRGDGKVRTVGRVIWSGLINAFPDLGNTI
FHIDGNEDGDVVVACDITGTQDSAWGFISAKGQYFAEPHLFILHVNEEGLIDNIRAYWDNAGVNRQLGHFEVD
>AHV92793.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MATPSSSGRTRTVAPLAETPRHAQILKKLRSRPTLRGSAFALFILIAVVLLAPFFAPQNPYDLANLNLLDGRLPPRSPMM
EGGIYWLGTDDQGRDMLSAILYGLRISLFVGLSAVALATAIGSLVGLVAAYTGGIIDAILMRIVDFILGFPTILVALVLL
AMMGRGVDKVILALVIVQWAHYARIMRGRALQERRKEYVEAAANLGFPAWRIMLFHLLPNCLGPVMVFATIQIANAIVLE
ATLSFLGVGVPVTEPSLGLLIANGFQYLLSGDYWISLFPGLALLILILTINIVGDRLRESLDPRRA
>AHV92794.1 disulfide interchange protein DsbC [Bordetella holmesii ATCC 51541]
MNVRIVFLLVGLLCGTAHAQDGKSVSTTQPAGGKDKVYSTKSVQPADPVADAVKKRFELRFNDMAITAVRRTPYGLFEVQ
VGPDMIYTDEGVTWVMEGPLIDAATRRDVTRENQEKLSAIQFSDLPLELAIKQVKGKGTRKIAIFEDPNCGYCKQLRHTL
KDVDDVTIYTFLYPILSPDSSVKVRDVWCAKDKGKVWDDWMIDGKRPATAQCDAPIEDMLALGRRLMVRGTPTIFFENGA
RASGALPLAQLQQRLATSH
>AHV92795.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92796.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MATPDGRRTLERRRPGPGLGANGGHQAGGRRPPGGTTDTVARSIAQTMAKDLQRTVLVENRPGAGGNIAADYVAKSRADG
TTLLVTFTGFSINASLYRKLPFDPVKDFTPISMLAQVPSVLVARKDFPANDIPELLKQVKADPGKYTMALGAVGSSLHLA
GERMKMLADLDILNVPYKGTSPALADLLGGQVDMMFASSLSAQPHIKSGSLKALGVTSPQQLPQYPGVKPIGDTVKGFES
NAWFALLGPADLPPQTLQSVNAAASKAVAAPEFRKLLENESATAVSSSPEELGAFVRQDIDRYAEIVKFTGATVD
>AHV92797.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MNGDIAAQPFVNTDEESATYAKVAWRLLPFLFLCYLCAYLDRINVSFAKLQMASELALSDAVYGLGAGVFFIGYLMFEVP
SNLILMKVGARRWIARIMVTWGLISACMMFVSGPVSFYVLRFLLGVAEAGFIPAILLYLTYWFPNKRRSKATALFLTGIP
MSGVVGGPISGWIMHSMHGAHGWSGWQWLFLLEGLPTVLIGVIAFFYLDDRVADAKWLTDAEKARIQRDLAAEQQGNHLH
SIRDGLTNPRVLLLSGIYFFFTMGLYGISFWLPSLVKASGVTDTLNIGLLSAVPYLVAVLGMIVFSRSSDATGERRWHLS
IAGLLGAVGLAASVIYAKDTTFALIALTIGTVGVMATISQFWVLPPAILSGGAAAAGIALINSVGSISGVVSPYAIGWAQ
TAHNSTGAGVIALVCCLVIGSILVFTVPARLVNVQRQDAARR
>AHV92798.1 fecR family protein [Bordetella holmesii ATCC 51541]
MNASETDRLHPAIVEQAAQWMMRTLGAPGTDTEAACTAWRQADARHELAWQRMQGIRQDMGAVCVVPVSGTTAGQTILRY
CEKRSRRNALKWAVGGFALGTAGWMSARQGVWDGGDVYRTATGEQRTVTLPDGTVLTMNTGSVVSLDFDAARRQLDLREG
EIMIATAADSGGRPFRVKTSNAVLTPLGTRFAVRELDQGRRITRLTVFEGSVRAEPAARRQAARVVHAGEMAELDDRTLL
FAAAIQEDQPAWANGMLVANRMRLDRFLDELARYRPGIVRCDAAVASREVTGAFRIDDTDRALEVLASVLGLQLRYRTRY
WVSVGPRVA
>AHV92799.1 hypothetical protein D560_2453 [Bordetella holmesii ATCC 51541]
MDFQLKRNEMGRLVLTFNGQTHDGVMPVRAFPISAPAGGLSLVTPDGREVLWLDSIDCAPVGARALIEEDLAGREFMPEI
RRIVSVSTYATPSTWQVETDRGDTQFVLRGEEDIRRLAGQTLLISDSHGIHYLIRDALGLDRHSRKILDRFL
>AHV92800.1 ZIP Zinc transporter family protein [Bordetella holmesii ATCC 51541]
MGLAVAGGLAGFSATALGALVAGILGRISPRTQDSMLGFAAGMMLAASAFSLILPGLAAAQPLVGGGSAAAAVVVLGMAL
GVLLMLGLDYFTPHMHAQSGLRGPESARVNGVWLFVLTIVLHNLPEGMAVGVSLSNGDLGVGLPLTSAIAIQDIPEGLAV
AVALRAIGLSRRQAVWIAIGSGLMEPLGALIGVGMASGYALAYPVSMGLAAGAMIFVVSHEVIPETHRNGHETFATVGLM
IGFGVMMFLDTALG
>AHV92801.1 putative exported domain protein [Bordetella holmesii ATCC 51541]
MTLQGSGAGLVIDAQAALEPMASFPLRDARLELKRDDGSGLRAVLDWESASEPGAPDHIQAHVVSDRLDLKRLLGDWLPA
AVLSAQADIQVQVQDLSDLRSADLQLRIAPDSRWNKQPLAGTLAAQVRSQEGSAVFAPGLPPGLSVPQLEMDLTLGKNRL
HAHGALQDVRATLSLDVQAPDLAAFWPDLPGGGVVLKADVDGELSRHKGKVDARYTPPKPQPRRLGDAPVQAKLEFEGGW
AEQDGLAGWRGRISGLSAQTAGFTLAVPGMLSLAYQPEAAAPAWQWQVGAADLQATFPDKQRLSLSHAGSRGGAGRWETA
GRADNFELRATMLRQLMTALGQENKNAQANRVNAVISDEQRRIALDFSWDLKYAGALSGGPDWRGAAAICASRATLPCRW
A
>AHV92802.1 pyridoxamine 5'-phosphate oxidase [Bordetella holmesii ATCC 51541]
MSVSDLRQSYERGVLLENQAAIAPLDQFALWFDEAIAAKVPEPNAMTLATVDASGQPSARIVLIKGYDDRGFTFFTNYDS
RKGQDLLANPRAALLFFWQPLERQVRIEGVVERVSPEESEAYFKSRPVGSRIGAWASNQSQPVTRDDLEARERDFRSRYG
DDPPRPPHWGGYRLVPTCFEFWQGRPSRLHDRLRYRADGKQGWVMDRLSP
>AHV92803.1 fels-1 Prophage Protein-like family protein [Bordetella holmesii ATCC 51541]
MKKRLSIMALALAAAAVQAAPAKPLRTPQAGVLCDSHFCADARGLSTALTQKYLGAQAAGALREQGAFDHQAFTYENGVF
CDTRERLCRENRYFGSDGKRSAAVEPVFTRLLFPE
>AHV92804.1 lipid-A-disaccharide synthase [Bordetella holmesii ATCC 51541]
MVAGEPSGDLLAGRIIGGLQARAPDLHCAGIGGPQMQARGFQAWHPMHALSVFGYVDALKRIPSLLSIYGDTKRRLLCDK
PSAFVGIDAPDFNLRLELQLRQAGIPTVHFVGPSIWAWRYERIHKIRAAVSHMLVLFPFEEEIYQKEGIPVTYVGHPLAN
VIPMHPDREAARARLGLTPGERVLAILPGSRSSEIRILAPRFLAAAQLLLRNDPALRCIVPMVNPQRRAEFEAILALHPV
PGLRCVTTDDVQGDPGTPVAWSVMEAADAVLVASGTATLETALYKRPMVISYVLSPWMRRIMAWKSGQQRPYLPWVGLPN
VLLKDFAVPELLQDDATPQKLAEAVWTSLTDKDNAARIEARFTALHQELMRDTPALAARAILEVAHGAG
>AHV92805.1 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I family protein [Bordetella holmesii ATCC 51541]
MKNTYPASVFKAYDIRGTVPDLIDAPFARSLGFALAKRARSCGNTELVVGYDGRLSSPDLAVALQEGILEGGVNTFDIGC
VPTPLVYFAAYSGQLGAGVAITGSHNPPKYNGFKMMLGGRALYGDDVQALRADMQAPKACRLTAPARAARPTSCRSTSSA
SSRTSHLRAP
>AHV92806.1 phenylacetic acid degradation operon negative regulatory protein PaaX [Bordetella holmesii ATCC 51541]
MPPLDRFLARLLEQDPPRAKSLCVSLLGDALGPHGGAIWLGDLIELLAPVGINERLLRTSVFRLVAQGWLQSERHGRRSL
YLMADTGRRLTALASQRIYEGPPHQWHGEWTLVALPRNGSNGLAERAELRRALEWEGFALVAPGVFAHPATEARAAHDIL
EQLGIPDKALVLAARDLAGAGGLPIASLVPQCWNLDAVAEQYRLFTRSFSPLAPLVADTAPSPPQAFALRVLLLHHWRRI
VLHDPQLPMPMLPADWPGGPARALCGQLYWQLFDASEHHLDAVAGRENNRYHPLDVDVSHRFSGRPQSVSSADSH
>AHV92807.1 hypothetical protein D560_2464 [Bordetella holmesii ATCC 51541]
MHCLPGPLSSLAQEAMPAHGDAADAHAIFDALACRNLHLNATALALCISRSTLH
>AHV92808.1 dihydrolipoyl dehydrogenase [Bordetella holmesii ATCC 51541]
MSNLKPIKIPDIGDFKEVEVIEVLVAVGDTIKAEQSLITVESDKASMEIPASEGGVVKSVKVKVGDKVAEGAVILEIEAG
AEAGKADAAQPEAAKAEAPKAAAAPANAKPAKAAAAYSGSADLECDVLVLGAGPGGYSAAFRAADLGLSTVLVERYATLG
GVCLNVGCIPSKALLHNSAVIDEARALAAHGISFGEPKIDLDKLRGYKDSVVAKLTGGLAGMAKARKVSVVTGVGEFADF
HHLTVKASDGKSQTIRFKNAIIAAGSQSVKLPFLPQDDRIVDSTGALALREIPKKMLIIGGGIIGLEMGTVYSTLGARLD
VVEMLDGLMQGADRDLVKVWQKMNTGRFDNIMLKTKTVGAEARADGIYVSFEGEGAPKEPQRYDLVLQAVGRSPNGKKIA
ADKAGIAVTDRGFIEVDRQMRTNVPHIFAIGDIVGQPMLAHKAVHEGHVAAEICAGQKSFFDARVIPSVAYTDPEVAWVG
LTEDDAKKQGIKVEKGVFPWAASGRAIANGRDEGFTKLLFDAETHRILGGGIVGTHAGDLISEIALAVEMGADVVDIAKT
IHPHPTLGESVGMAAEVAEGVCTDLPPQRKK
>AHV92809.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MSAVLEVQGLSARYGKVGALNDAALQVRAGSIVTVIGANGAGKSTMLNAIMGSLPQTGHAVGAVQYAGNDVSGWQVERRV
YAGMSLVPERRELFGSMSVEDNLLLGGFRRYRAREAGWRDTLLEVFDLFPRLRERRSQQAGTLSGGERQMLAVGRALMAK
PQLLMLDEPSLGLAPRIVREIFHIIARLRETGVAILLVEQNARAALQVADYGYVLETGEIILHGPARELAGNPRVIESYL
GLGKQH
>AHV92810.1 hypothetical protein D560_0783 [Bordetella holmesii ATCC 51541]
MQDDHDAIVQLVLQFADKAIDNDFESALIGKMRDFRRGLAHADLPEVSG
>AHV92811.1 single-stranded-DNA-specific exonuclease domain protein [Bordetella holmesii ATCC 51541]
MLDLVSKRHPGLIRKFGGHAMAAGLTLGRDGFAAFAPAFDAAVRELTGRDRFEPLLETDGSLESGYANAEVAGLLQQQVW
GAGFAAPLFLDEFTVRSQRLVGEKHLKLSLERGHQRFDAIWFGHDEMMPERIQAAYRLEQNVWNGMVTAQLVIEYAEPV
>AHV92812.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MNDQYQALYQSFRWLVPTQFNIAEVCCHRWASSSADARRIAIFYEDEAGNREVWTYARLAEAANQLAQGLTKMGVERGDR
IGVVLGQRPETVVAHMAIYSVGAVVLPLSSLFGPEALGARLRDSETRVAIVDAASSANLMAVSDHCPDLQQIIGIDFADE
RVLPWRTLLARQPGEFKPVPTRASDPAILLYTSGTTGAPKGALLPHSVLIGNLPGFVASQDWFPRPADVFWSPADWAWTG
GMMDALLPTLYFGHPIVGTRGRFSPERAFELMERYQITNTFLFPTALKMMMKSVPDPVAVTAWPYGPS
>AHV92813.1 phosphoserine phosphatase SerB [Bordetella holmesii ATCC 51541]
MSTHLIIQSPGLTAHHAEQLAALARAEGIARITTTAARLLNVAHDADTRAQVHDWAERHAIDTAFVPAGLKLSSCKVLAM
DMDSTLINIECIDEIAVCAGVGEKVTQITEAAMRGEIKDFSESLRRRVALLQGTPATVLERVYEERLRLNPGAEQLLASV
QAAGIKTLLVSGGFTFFTERLRARLNLDSAHANTLEIDAGGKLTGRVLGDILDGAAKARYLEAFASEHGASADQIIALGD
GANDLLMLARARYAVAYHAKPIVRQQTPYALSVSGLDGVLNWFEG
>AHV92814.1 hypothetical protein D560_0824 [Bordetella holmesii ATCC 51541]
MTRTLKYCLLTALLFGTVAQAQTQGRLTGPAAAGVPPVSAPSVAPPPSDGAAPPVVRQIDVAAPGVSASAPAAPAATSTD
LAQENPGDVTRALMQAQADGRRYLKSFDQPLPQWFDSSSTSGKSGSGGGLGAGQ
>AHV92815.1 bacterial transcriptional regulator family protein [Bordetella holmesii ATCC 51541]
MAETSLARMIAILDLFKSPRAAWPAEAIAEAMSYSVPTVYRYVRELVACGLLRRDVGGTFVLGPAATELDYHIRTGDPLI
TAAAAPMAALAADTGMDAVLATICGARIITVHHELGADPARMSFGRGRRMPMFRGAMSLCIMAALPRAQMRKLHQECGDA
PPDLSWDEFVDEVKQLRRRGYAYTEGALDPNLAGLALPFTEPDRHIVASLGLVSRQTRLATSDKTPLLAALRECAQRIHT
TLGSACTAGPTAADLNAHAAPTAGSL
>AHV92816.1 xanthine permease family protein [Bordetella holmesii ATCC 51541]
MTFIAALQHLLAILVPIVTSGLLICQALGVPSRDTTLIVSMSLVISGIATYVQCHRFGPFGAGLLIVQGTSFNFVGPLIA
GGSLMVKQGSPVEAVMAAIFGVVIAGSFVEMGISRILPFVKRLITPLVTGIVVLLIGLTLIKVGLISMGGGFAAMQNGTF
ANAENLLLSGLVLGTIIVLNRVPVTWVRSAALVIALAIGYLAAAYLGRLDLSSARDAALFQVPVPLHFGLAFSWPLFVPM
LIIYLVTSLEAIGDITATSQVSRQPVQGPQWMQRIKGGVLVNGANSLLAGVFNTFPSSVFAQNNGVIQLTGIASRRVGIW
IAAMLIILGLFPSVAGILQAVPEPVLGGAAMVMFGAVAASGINILAGIRLDRRALLIIAVSLALGLGVSQVPEFLAHMPH
ALKSVLESGVATGGICALLMNWFLPEPRQE
>AHV92817.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MSETVLSQLRDGVLTLTLNRPDRRNALDAATYHALADSLLAVQHNAQAAAVILTGAGGHFTAGNDLRDFQTQRPEGDSPG
LRFLRALIDCDATVLAAVEGHAVGVGVTLLQHCDFVYASEQAKFKLPFLALGLCPEGGSSQCLAQIVGARRAAEWLLLGD
GFGAAEGMAGGLINAVTEPGQALSQAQATAARLAAQPRQALRVSKALMRGPQRPALHATLDREADQFRQRLASAEAQAAF
ARFFAPAATDLKKANPA
>AHV92818.1 hypothetical protein D560_2789 [Bordetella holmesii ATCC 51541]
MGSGGGLILDMLASHVPDASGILRIDANSGAGTSPWAISTDIFRG
>AHV92819.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92820.1 organic solvent tolerance family protein [Bordetella holmesii ATCC 51541]
MPGLRISPGLRVRHFPDEQIPAYLEADEIAGDPDSEITLKGNAQVRRLDGVVKGDSIHYSNETGDVNVQGNARIMRDATL
VTGPSARLNMNTYSGEIEQPNFWIGASGGTARADHADIFSRSQMRLTEVTYSGCPCAKPSWYIEANTVDLDFDENEGVAR
NGVLYFKDVPILASPYLTFPIRKERKSGFLLPTYGSSSKTGLDISVPYYFNLAPNYDATLITRYMGKRGLQIGGEGRYLG
ESYVGSVSGTYLPNDHDAGFDRYMYRLTHRQFFGGGFYADWDINGVSDDNYYRDMTTLGLNTASTTYLPRQARVGWSSSY
WQTYVQVYKYRTLQDPDAPIVPPYNKEPEIFLQGARYDWNGFDVRMDSTAVRFRRALFAGTRVGQEGERLQAYPTISYPI
VRAGWYITPKVGVNYTQYHTSWFNTDWNKLGSMSPYQATDSRTVPIFSVDAGMTFERPTTLFGKESTQTLEPRLYYLRVP
YRNQDALPVYDTSLSDFSFEQAFQENVYTGGWDRIANANQLTAALTTHWLDANTGFQRVALSVAQRLYFEDQRVTLPGET
PRENVRSDFLVGASAALTDTLTTDVAAQYNPYDNNWSRGLVSARWSPQRQTTVAVAYRYQRDPINNISYAPRGQNQVTLA
LQWPFTNRWYGVGRIDYAIKSDPGSVVGASDGPRVTQAIAGVEYKGDCCWTGRMVFQRYAVAANDTNTAIFFQLELTGLG
ALGTDPLKLLDKSIPGYQPVSQPAAAGTTFERYE
>AHV92821.1 tryptophan synthase, alpha subunit [Bordetella holmesii ATCC 51541]
MSQRIAAAFERVAASGRASALIPYIAAGDPSPAATVPLMHALVAAGADILELGVPFSDPMADGPVIQRAAERAIAQGMGL
SRVLQAVAEFRRQDLTTPVVLMGYGNPIERMGQQVFVQSAREAGVDGVLVVDYPPEEMDEFGAALEAADIAPIFLIAPTT
TEARMQTIGRAARGYAYYVSLKGVTGSGSLNTDDVAQRLAVIRRHIGKLPIGVGFGIRDADSASQIARHADAVVIGSKLI
ETMEQAVADVPPAQQTDAAINAASLWLGSIREALDQVKRERAPA
>AHV92822.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFAFKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92823.1 hypothetical protein D560_3600 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSHGLKRVLDPEMLAVWQTGVLYQLIHALGLL
AVAWLSTRYSSALLPAAGWLMFAGTVAVCICWPARGHESWVPLRPSVGWLFCCPGR
>AHV92824.1 methylglyoxal synthase domain protein [Bordetella holmesii ATCC 51541]
MRFGLAANRLHHETPDAALFSWLRASGAGIREMGIELHTVGRTHDAIAREGMLQGYRGLIRYPYGREGGLMKLVARVTEG
RDGQAPFDGAIYLIDPVDPSSIFPEALALKRQCITHGRPFISTLAGAIEWIEIERLSAGLPADPALARLFRFDGQTLALI
AHDALKDEMVAFADQYFDVLSQFARRVATGTTGGLLNDLAWSRGWPKDQPWVTRYLSGPLGGDAQIAELVLEHQCQRVIF
FEDPHVARQHEADIQLLERAVRVVTDSATCATSPTVARRWAEAVRTRQAM
>AHV92825.1 luciferase oxidoreductase, group 1 family protein [Bordetella holmesii ATCC 51541]
MSVLATIPFSVLDLAPIVQGCTPADAFRSTVDLAQHVERLGYRRFWLAEHHNITGVASSATAVLIGLVASQTQTLRVGSG
GIMLPNHAPLIIAEQFGTLESLYPGRIDLGLGRAPGSDGATQQALRRGPRSGLEFPALVQELRAYFAPERPGQAVRAIPG
AGLDVPIWLLGSSDFSARMAAELGLPFSFAGHFSPEGMAAMRLYRHLFKPSATLARPYSMIGVPVVAAPTDEEAQLLATT
QQLKFLSLIRGNRLPLQPPVENMDEHWNEWERAAVEQKLGAAIVGGPDTVKRKLEDIVARTEADEVMIVSDFYRHEDRMR
SYDIVASLKQRDGVGRAA
>AHV92826.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTHECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV92827.1 FAD binding domain of DNA photolyase family protein [Bordetella holmesii ATCC 51541]
MNTLVWLRSDLRLHDNQALSAAATQGLTRAVFLASPGQWQTHGDAAVKVDFWRRNLLVLGSSLAQLGIELSVLTLKDWSQ
APQALAVFCAARAIEQVHINAEWGINERRRDQACTDRLARDGVSLSTHHCGTLLPPGTVRTGKGDPYRVFTPYARACRDI
LRSAPPAAQRAPRPQGPVSSPPSLPDIWPDVDAGIAARWPAGEDAAHARLRDFLDQDLMRYHERRDLPALPGTSALSPYL
ASGVLSPAQCLRAALRANQGEIDSGQQGARAWITELLWREFYLHLLAAYPALSMHQPMRPETRYLAWRRAPEDLRAWQEG
RTGIPLVDAAQRQLLATGWMHNRLRMVSAMFLAKNLLLDWRLGEAWFMGHLIDGDLAANNGGWQWSASTGADAVPYFRVF
NPITQSRRFDPKAAFLRHWLPELAGLDDKSIHEPSDAQRRATGYPQAIADLKTSRLRAIEAFSSLPAAGT
>AHV92828.1 putative cell division repeat protein [Bordetella holmesii ATCC 51541]
MASKRKSSSQGGSTLYGVLAGLLIGLILAAGVAFYVTKAPVPFVDRATRQTSGTERAVDPRDAPDPNQGLYGRDGAAGTA
PTGPTASAPTPLADGKTDDLGALIASLPSAGQATAPASLPVPAAPPAAIKPATTAKAPRRPQTRHPRRLRNTPTAITICR
LAPTGGRPMPNRCERAFCCWGCRSM
>AHV92829.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MGEGVAHRIEQLIVDGVLKAGQPLPSERRLTAKLGVSRSALREGLQLLRARNIIHTEQGRGSFVAQIAKVDAGPLVHLFH
SQPRTLYDLLEVRALLEGESARLAAIRGTEADFILIRRRYEAMVAAHLTPTDSATHAHLDHAFHLAICEASHNAVLVHTL
QSLTDLMLGSVFACVNNLYHREPHKQQIDRQHTRLFDAVMGRQPDQAHNAATEHVDSVRQSLHEIEQEGERLVRATLRLE
GWA
>AHV92830.1 hypothetical protein D560_2772 [Bordetella holmesii ATCC 51541]
MSKANVLRLLHLSDTDPALAARLHPLERWGITTAAEALAEVSRDFRLPFSADEARAALASHEGLPLYLPQAGNSRGTKQD
PG
>AHV92831.1 TRAP transporter, DctM subunit [Bordetella holmesii ATCC 51541]
MSTGALFLMGVFTLTVLIDMPIAFGLVLACLAYLTVYDAAPMMVAAQQYVAGLDSFTLLAIPLFILAAQLMNGAGLTQRI
VRLCAAIVGDIKGGLAVVAVLACLMFGALSGSGVADVVAIGSLLLPAMARSGYDKGFSCALVGSAGATSTIIPPSIVLII
YGTITDTSVGKLFVAGIIPGLLLGLSLIGVAIWQSRKHNWAGGQPFSWDELRAALVDAIPALMVPVLIIGGIRFGIFTAT
EAASSAIIYALLIGFFWYRPLTVKSLWESLKSTGEGSASILLIIGASGLFAWVLIAEQVPQALSQLLVDWTDSRVAVLLV
LTVVLLALGTFMEAIPVIIIVAPVVMPVLAHYNIDPVHFGILLSINMAIGANTPPVGVDLMAACKIGGINMMQTLRPLSW
MMLAMTAVMLLLTFVPELVLFLPRHMQ
>AHV92832.1 his Kinase A phosphoacceptor 13 domain protein [Bordetella holmesii ATCC 51541]
MAGMEILANLLQAASQQRSLRIASPLQGALACALPVLLLCVVMRHGSPKLSLALNGALLILILPLTALVLRYGQIWFPPS
AALFSLALCYPIWSWRSQEAVLHYLDDELKRLRREYTPVLDQRHPALLLGHRSMEDRLGQFRRALALVRNLRQVLTDGLN
GLPDATLVFDQDARLQFRNRAAAKFFVRSPSVRLIRTSL
>AHV92833.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MSNRSRTVWLVVGLLLVAANLRAPVTAVAPVLSILQEQFRLSAAQAGLLTTLPLLAFGLVSPFAGAIARAHGLERTVLVA
LLAIAAGVLLRSAGAISALYAGTLLAGMGIALGNVLLPSIIKRDFPGRVALVTSACALTMGGAAAIASASAVPLTGVGGW
PLALALLGLSFWPAWAPCGPSAWAQARGQV
>AHV92834.1 HAD ATPase, P-type, IC family protein [Bordetella holmesii ATCC 51541]
MESLTGRAATPNATAIPAGEDSQANWHARTADEVAQALTVDVRDGLSNDQAQARLARSGPNVLPQGEKKHPLMRLLAQFN
NVLNYVLLVASFIKMMLGLWLDASIILAVVVLNALLGFFQEGRAEKALDAIRHMLSSEARVVREGHSRLISAADVVPGDV
VLLESGDRVPADLRLVDVKNLLTDESALTGESVPVEKTVAVVAAKATIGDRHNLAFSGTMVVSGRATGVVVATGSRSELG
RINQMLTDVAVLDTPLLRQIARFGYVITAVIMILAVVLFAWGHWLGHLSFVELFQAIVGITVSVIPEGLPALITITLAIG
VTRMARRNAIIRRLPAVETLGAVSRICSDKTGTLTLMEMMVTSVVTAEGVYDVSGNGYAPEGRVTMQGQPADTVSLSLLG
RVSLLCNDASLVRVDEQWKVQGDPTEGALYPFAAKLGMELGPETAAWPRVDAIPFESDHKFMATLNRGADGHILLVKGAP
EIIMAHCDRQQMGDGAMPLDRERFEAQGQDLAARGERVLALAWLPHPSLAAGNLGPADLPHNLILLGLVGLMDPPRKEAM
QAVRECHAGGIRVTMITGDHKVTAAAIAGMLGIGDGKTAVTGAEIEAMNDAALQECVRDVDVFARTSPEHKLRLVKAMQA
NRQIVAMTGDGVNDAPALKKADIGIAMGIKGTEVTKEAAGMILADDNFASIAAAVKEGRTVYNNIEKAMLFMLPTNVAQG
AVIAIAIIMGLALPLTAPQVLWVNMVTSVALGLAVSFEPHEPGVMRQPPRSVDRPIVTRFGIWRILFVGGLLILYTLAAF
FVMRSQGVSDDMARTAAVNAITLGQVFYLFNIRYLVDSSLSWRAHRSNPYVWLGIAAVLVLQLLFTYAPWMQAIFQTEPL
PAMAWPALVGGAVVVFLAIEIEKWALRAYPAMYRALAGSA
>AHV92835.1 hypothetical protein D560_1042 [Bordetella holmesii ATCC 51541]
MTALGPLRDRLRREGVKDWRQAHQAGAISDEVAAQILAAEAAVAEVVAVDDFAPEELTGQTESPAHRAL
>AHV92836.1 lamB/YcsF family protein [Bordetella holmesii ATCC 51541]
MSKTLDLNCDMGESYGAWPMGNDAAVLPLVSSANIACGFHGGDPGTMRQTVMLARDNNVAVGAHPGLPDLPGFGRRVMQI
SAQEAYDMVVYQVGAMAGVAASQGVRLHHVKAHGALYNMAAKDAVLARAICTAVRDVDHRLIVYGLAGSHWVTEAETLGL
RCAQEVFADRSYQDDGSLTPRTQPGAMITQADQAVAQVLQMVQRGSVTSVSGKTVMLAADTLCIHGDQPNAVQFASAIRQ
ALQAAGIAISAA
>AHV92837.1 transglutaminase-like superfamily protein [Bordetella holmesii ATCC 51541]
MKHLIRHITHYRYTSPVSYSIQVLRLTPRQDEHQRALRWFIDAPAPLQEQVDAFGNITHTLTMTRPHEEIELRVTGHIEI
DTLAQGRLPEEEPRLPLQAFCVPTALTQPNDPVRALARGALPHGLRTAEDALKLADVICDRVHYEPGTTDVGTAAGDVLR
LGHGVCQDHAHLFLACARGLGVPARYVSGYLYTEAAHAASHAWVDVWLDGQGWISVDITNRQFASDCHCRLAVARDYDSA
SPVRGVRNGGGGEVMSVSVQVQAAHQQ
>AHV92838.1 carbamoyl-phosphate synthase L chain, ATP binding domain protein [Bordetella holmesii ATCC 51541]
MPKRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETADVTYIEPITWQAVEKIIER
ERPDALLPTMGGQTALNCALDLAHNGVLTKYGVELIGANEHAIEKAEDRQKFKQAMTDIDLASAKSGVAHTLDEAWEVQR
RIAAEIGTAGFPVVIRPSFTLGGTGGGIAYNAEEFETICRRGLEASPTNELLIEESLLGWKEFEMEVVRDKADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAVNPKNGRMIVIEMNPRVSRSSALASK
ATGFPLPRWPRVWPLAIRSMNCKTRSPAAPPRPRSNRRSITSSPRCRVLPSRSSRRLMPA
>AHV92839.1 alanine racemase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MCATPTQHELHGRWPQARTVDDFRVNLAAVQARIDAACDRAGRAAGSVRLLPVSKTVDEARIRLAYAAGCRFLGENKLQE
VSRKWEALADLPDLRWSVIGHLQTNKARLVARYAQEFQALDSLRVAQALERRLQDEGRALDVFVQVNTSGEDSKYGFAPD
QVE
>AHV92840.1 cys/Met metabolism PLP-dependent enzyme family protein [Bordetella holmesii ATCC 51541]
MIQQALERKLRQAAPAVDAAAAPRPSSHRHAIAEEFYKFHLHPSYKQLRILNDGAARLGLQNPFFKLHEGTASDQTRIGG
QTYINYSSYNYLGLSGDPIVNDAAKQAIDRYGTSVSASRLVSGERPIHRELELEIARLYGVDDAVTFVSGHATNVSTIGH
LFGPRDLILHDELIHNSILQGIQLSGARRLPFPHNDWSTLDNLLDEQRHQFERVLIVLEGIYSMDGDYPDLPRFIELKRR
HRCFLMVDEAHSLGVMGPRGLGIREHFNLDGGDVDIWMGTLSKTLAACGGYIAGESALVEHLKFLAPGFLYSVGMPPPVA
AAALAALKRMHDVPERARVLQTRGRQFLTQARAAGLDTGTSEGLAVVPVIVGSSLKATRLSAQLFEQGINVQPILYPAVP
EKVARLRFFISFMHTEEQIQQTIRKLKALL
>AHV92841.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92842.1 hypothetical protein D560_1099 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSE
>AHV92843.1 alpha/beta hydrolase family protein [Bordetella holmesii ATCC 51541]
MSPAAVSEAKILYLHGFRSSPLSFKAQLMGQAMADLGRQQDYACPALPASPRAAAELAQQTARQLVGDAAPQQLTVVGSS
LGGYYAIWLAERLDCKAVLINPAVNAPRDLATQVGEHTMYHSAAPFVFLPEYVQELSELHVPGLTRPQRYFLLAATGDEV
LDWREMRDRFEGCRQRIIPGSDHGLSDFAHWLPEVLDFALVHPH
>AHV92844.1 acyl-CoA dehydrogenase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MQWPFLQERHRVLAQELEQWCQTHLVRLDETDVLGACQQLVRSLGQAGWLRYSVPGGPDGNLGGALPGLDALSLCVIRET
LARHHALADFAFAMQGLGNGAISLAGSPQQQAAYLPAVAQGQKIAAFALSEPEAGSDVAALQCRAQAQGDSYRLDGTKTW
ISNGGLADFYCIFARTGVAGSSGISAFIVDADTPGLVVQEQIDVMSPHPLATLQLQNCRVPAHQRLGEEGQGFKIAMRTL
DVFRTSVAAAAVGFARRALTEGLAHVRQRKMFGQTLADFQLTQAALGDAATEIDQSALLTYRAAWVRDVQQRSSTMETAM
AKMAATESAQRVIDRVLQMFGGKGVVRGHILERLYRDIRSLRIYEGATEVQKLIISRELLRG
>AHV92845.1 hypothetical protein D560_3656 [Bordetella holmesii ATCC 51541]
MRMLLAAGGPSLSVNIQTITNGNNHDTNCLHDGIFAAASGHSFAQA
>AHV92846.1 hypothetical protein D560_3070 [Bordetella holmesii ATCC 51541]
MLGRGKSAVFSIVEAARGQGAAAALPGLPASAIPGSLALMDHQAQSFFAALRRPTQRR
>AHV92847.1 bacterial DNA-binding family protein [Bordetella holmesii ATCC 51541]
MATKAKAPAKKVTKTATKAPAKKAVATKPAVKKTATAAVRPIKEALNKSQLIAHLVESTSVEAKSVKAVLAGLEAAVLGS
VDKKGAGEFTLAGLFKVAVQKVPAKAKRFGKDPFTGQERWFPAKPASVKVKVRPLKKLKDAAQ
>AHV92848.1 alkylhydroperoxidase AhpD family core domain protein [Bordetella holmesii ATCC 51541]
MEFLSTIKDQLPDWAKDIRLNLDSVIARSTLAQEDALGAGLAAAYASGNAFLINAFKGALSETDANATLTAAALMGMNNT
WYPYVEMSGDAQLKSLPAQLRMNAYASHGGVEKKRFELFALVASIVGKCHFCVQSHYENLKNDGLSTEQLRDAGRIASVI
NAAALALAAQGK
>AHV92849.1 histidinol-phosphate transaminase [Bordetella holmesii ATCC 51541]
MTTAASRAARTVRADILAQTAYPVAPSAAGVIKLDAMECPYPLPEGVRQAIAHAAQDTALHRYPQADLTALKAEVANAFG
VPPGADLLFGNGSDELIHLLIQACCEPGDTVLSPWPSFVYFEMAARFDHAHFEGVPLTADLELDLPAMLAAIERHQPKIV
FLALPNNPTGGLWPDEAVDAILEAAPGLVVIDEAYQPFAGHSWMPRVAGLPNAVVMRTVSKIGLAGLRFGYLAGHPDWIA
QIDKVRPPYNVDVLTQAVLHVVLRDKAVLDEQAARLRADRQPLAQALAALPDVRVYPSAGNFVLARFSGKLDGNAVHRAL
KARKILVRNFSDAHPLLANCLRISVGTPDENAALLAALQDILSP
>AHV92850.1 hypothetical protein D560_0773 [Bordetella holmesii ATCC 51541]
MVKIRMLGNKAALATDVRHHAPDDSGNYGARMNFYAV
>AHV92851.1 rrf2 family protein [Bordetella holmesii ATCC 51541]
MIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCG
GKVDCTSGNDGKPGKCMTHELWATLNRKMVDYLDSVSLQDLVDQQRVRQLQEANNQAQGCSVRVNRAGSNANAATAVVSG
TAANAAATV
>AHV92852.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MRRRDWQIILLIGVAHSSSHFFQLVLPSLYVSLGNEFGLDFARLGLLVSVFYVVSGLGQASSGFVVDRVGARPVLWFGLS
CFVLAAVLIGAANGYAMLMLAAAIGGVGNSIFHPADYSIINHRVSPARLGHAFSIHGLTGNLGWALTPVFITTITLLSNW
RVAAFSAAGLIALVLLLTVLGRDLLGAPEPAREAGPASSAQASVWQTLTALAARPALWGRFCFLLSRPLRCLRCRTTPFR
YWGSCMTCRG
>AHV92853.1 sulfatase family protein [Bordetella holmesii ATCC 51541]
MYSQILVFIVSAFILLTLSRLALMLWQRKRVAEAGHPMRILLGGLRIDAHLIGIMVALPLALAPWLGQWSAAIAVNGVWL
VTAWSLICLLECSTPQYVIEYDTRPNQLYVIYLKYPREVFSMLFKEYRLALFLGVALLAALAGLGWRLFSQPWLFTDPVL
AWWLRPLLTLAGIALCVLAIRGTLKHRPINPSTVAFCGDGLVNALALNSLYNVMFSVYSLKNEASASRAYGDMDDADIQA
IVRAASRIEGAPSDPAIPTLHRQVPAQRPGRKRHLVLIVEEGLGALFVGHLGGSGCTPELDRLAPLAWMFKHAYATGTRS
VRGLEALSAGFPPSLSQAALRLPGAQSRFFTLAQLLGQQGYRNCFVYGAKPTSTT
>AHV92854.1 DNA polymerase I [Bordetella holmesii ATCC 51541]
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVINMLRKLVLDHKAEYAACIFDARGKTFRDDLYPEYKSHRPPI
PPDLAAQIEPIHAAVRALGWPVMAVEGVEADDIIATLARRATEEGLHTVVSTGDKDLAQLVNPQVTLVNTMTGEVLDEAG
VVNKFGVPANRIVDYLMLVGDAVDNVPGVTKVGPKTAVKWLSEFGSIDNLIQHADDIKGVAGSNLREAMVHFPLTRKLLT
VKEDCDLEGLITSAEDLKPKAPDQATLSALFDRYGFRTWLRELSGDAERLPSGDARAAEVAYQAPAEQHYQIITEWHDLD
AWMARVDKAGLVGLDTETTSLDEMQARLVGISMAIEPGVACYIPVAHRGPEAGTQLPRQEVIERLRAWLEDPARPKLLHH
AKYDTHVFANEGVTLRGVTEDTMLEAYVLESHRGVGLTDLAQRFLGRSGVSYEDLCGKGAKQIGFDEVAVDKAGYYSAED
ADFTLQLHQVLRPRVAADAGLERIYALELEVSRVLVVIERNGVKVDAAELGRQSHELGREMLSLEQKAYDLAGQPFNLNS
PKQLGEILFGRMGLPVVRKTAGGAPSTDEEVLSKLAQDYPLPQVLLDYRGLSKLKSTYTDKLPRMINSATGRVHTHYSQA
AVITGRLASSDPNLQNIPVRTEAGRRVREAFVAEHAGFLLSADYSQIELRIMAHVSDDANLQRAFAAGEDIHRATAAEVF
GVAVDEVTSEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVARYMEDTRRLAREQGYVETVFGRR
LQLPDIRAASGPRRQGAERAAINAPMQGTAADLIKLAMVAVQDWLVAENMQARLIMQVHDELVLEAPEAEVETLRVAVPR
LMSDVATLRVPLIAEVGVGRNWEQAH
>AHV92855.1 putative capsule polysaccharide exporter, ATP-binding protein [Bordetella holmesii ATCC 51541]
MTEARVVISLKEVSKAFRSKKGAKTVLDRISVDFIAGQNVAILGANGSGKSTLLRMVSAMELPDRGSVERRARVSYPLGF
AGAISSSMTGRDNVRFIARVYGCDLAHVERFVQNFSELGRAYDLPVSTYANSMRARLSYGVSMALACDVYVVDEMLAVGD
MDFKRKCLDVFAERSRGATILMTSSSTTTVRRFCTHGLILRDGRLQGFGELADVAERFAQVVDNSDDVALPAVDSET
>AHV92856.1 hypothetical protein D560_2607 [Bordetella holmesii ATCC 51541]
MKLHTDPATALNTVTAYGEGYIEVNQVRFSHAVAFGPEGAVTEWPVLAPAHISSAHLQQAAGLVAAKRDPLAFLDEPESG
LLQRSADTPEVLIVGTGLKQRLLPAEVLRPLLMAGVGVEVMDTQAAARTYNILMAEGRRVVVALLPTDGDTPA
>AHV92857.1 outer membrane lipocarrier protein LolA [Bordetella holmesii ATCC 51541]
MHMIRRAAGALAVFAVAALAAAPAWAATAQEQLDTFVATVKGATGSFKQSTVSPQGATQPAQSGTFAFQRPGKFKWAVQL
PYEQLIVSDGKQVFQYDPDLAQVTVRQVDQVIGTSPAAILFGGGQLSQAFAVSALPDRDGLQWLRAKPRNADAGFSQVDI
GLRDNQPARIELVDAFGQTTRVELSNLLPGAVPASEFQFTPPQGVDVVKM
>AHV92858.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92859.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MPQALTDDGVRLSYASLGEGPAVLFVHEFAGDMRSWEPQLRAFARRHRCIVFNARGYPPSDVPEAADAYSQARAVRDMAA
VLDDAGVEQAHIVGLSMGGFATLHFGLAFPERARSLTIAGAGYGAMGADRQAFQAASQAAAAQFETLGSAVYGPMYARGA
ARIPFLDKDARGWQEFADALAEHDARGAALTLRGVQARRPALDTMGESLADLRVPALIIAGDEDDHSLQASLFLKRILPA
SGLLVLAKTGHTINLEEPAAFNRAVLDFIAQVEASRWLPRDPRSIGQVMPPASA
>AHV92860.1 toluene, o-xylene monooxygenase oxygenase subunit [Bordetella holmesii ATCC 51541]
MQTDDWDGFRDPDQIHYRAYVNLQANEQTKLDGVLDQYGDSGSDAGLSSAQVRILAQALAPQRYLVHGFQQAQAYLGYIA
PSSYITNAACYASGDFLRRVTTIAYRTRALQIAHPDSGIGVNERELWEKNPAWQPTREAIERALITYDWGEVLTALNLVL
GPTLDNVLLHQLGEVSRNNGDEQNWLVSKLLAKDSARRNRWSSALARYAITKRETNVKPLQKWIGKWSAIADRAAAGLAP
LLDRSSDEVVATARAAREKLHTEFFGSQTE
>AHV92861.1 glycine cleavage T-C-terminal barrel domain protein [Bordetella holmesii ATCC 51541]
MRVLTAAGADALNFLHGQLTQDVTGLPADGARFAGYCTAKGRLLATLVLWRDGPESLQALVRADLAEALAKRLSMFVLRA
KVKISLTERAIAGVSANPSDLDALSQAAGGALPTVAWARAELPSGTWITAPGTGLRWWWVADADQIQHHGSALAAVLGLA
DEDSWRAADLAAGLPWIAAATQDLFIPQTVNLELIGGVSFTKGCYPGQEVVARSHYRGTVKRRMACGVTALPVPAPGVDI
YDAAEPGEPVGRVVDAARAGDAASLLFETTLAALPGNQLRLGAPDGPAIALTELPYSIQPQ
>AHV92862.1 lipopolysaccharide transport periplasmic protein LptA [Bordetella holmesii ATCC 51541]
MTDTFFAHRLIGSLLLAAGLCAPALAQQAAQPEDPSTLILSDSLHYDDIKRQSVFTGNVALTRGLMTLNSDKLEVHEDAQ
GNQYGTATANKGKLVRIRQERPENFEVIEGEGLRAEYDGTKSQFDLIGQAVVTRFICGKPFDTIRGDRVRYNEKTGTYQA
EGGPNSSAPGGRVRSFSPPRAKADAAIAECRASKKAPAPAKK
>AHV92863.1 glyceraldehyde-3-phosphate dehydrogenase, type I [Bordetella holmesii ATCC 51541]
MTIRVAINGYGRIGRNILRAHYENGKKHDIEIVAINDLGDPKTNAHLTRFDTAHGKFPGTVEVEGEYMVVNGDKIRVLAN
RNPAELPWGELKVDVVLECTGFFTTKEKAGAHLKGGSKKVIISAPGGKDVDATVVFGVNQGVLRAEHTVISNASCTTNCL
APLVKPLNDTLGVETGLMTTVHAYTNDQVLTDVYHEDLRRARSATMSMIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI
NVSIVDLTFIAKRDTTVEEVNSILKTAAEGELKGILNYNTEPLVSVDFNHNPASSNFDATLTKVSGKLVKVSSWYDNEWG
FSNRMLDTTVALMNAK
>AHV92864.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MLTLGGRYDWATNKESNYLANASSKVNSEAFTGRSGLTYLFDNGIAPYVSYSTSFQPASGTLAPARGGGNFDPTKGKQYE
AGVKYQPPGSDSMITASLFQLTQQNVTTADPVYSGYSVQDGEVRSRGLELEAKASLAAGLNVVASYAYLDAEITKDNANL
VTGVSKKGLRPAAVPRHMAGLFVDYTVRTGPLAGLGLGSGVRYVGSSCNASNSVKIGGYTLVDAVVRYDLGQLSQDLKGL
RASITATNLFDKRYFTPGFYDQSVFYGNRRAVVGTLSYSW
>AHV92865.1 cytochrome oxidase assembly family protein [Bordetella holmesii ATCC 51541]
MDRIIERYRRLVFFTWFLTLDLIMFGAFVRLTDSGLGCPDWPGCYGKVTPLGALSDIHRAASDMPFGPMTLSKAWIEMIH
RYVGALLGLLIIAIVYMAWRYRRQLGRSPALATAALVAVCVQGAFGAWTVTHKLMPAVVTAHLVLGLSLLALMTWLAARE
RPHLPVPALAAGLRPWMALGLILLGVQVTLGGWVSTNYAALACMDFPTCHGQWLPEMDVHGGFSVIRALGELPSGAMISQ
SALTAIHWVHRNFALVVFVYMGILAWRMRSLSGLSGPARLILLLLAAQLVTGLTTIFFQWPLLIAVLHNGGAAGLVLASV
LVMVRLATAGGPPLRRL
>AHV92866.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MRSLDARLWLADHRRIGALLMALLAGVGAIFPYQQLSNWVEGQREARAEAARRTVLEQARDLAGVHMPAGTQLRLRTAGQ
PDSFDQAIFPAPTPVAGIKAAQLVRHFDADGTATSWSIGLAGDASVSGWTCSRGHRVEFRVDHNTPQFASCHLASGNELD
AQKLPTGTWLQSTPEGWLLRTDGSEAFRVDGLDLLKTDVRLAPDRRRIGFEGLLAHESARGEMTYPAGTRVTLAGTHVPG
AQPGDLLFSPSRGRSARRSGGSDVAAGQSVLQAPDGLVRAVLDNRAAGVLDVASMRVGP
>AHV92867.1 hypothetical protein D560_3063 [Bordetella holmesii ATCC 51541]
MRARVEKAVRSYFKDVVREHFSHTRYSPVEVLSAGKKNTGDFVLELKEQDRERVRLGCYNQYQQAGSDALPEWRHAQGRL
PAGSMVFFVQERQGGKTVVDYPGAEGF
>AHV92868.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MTDLLTPFVWTALVAVIVLLLGLGMLLGSGGGRDDMGRKTFRLRPVRRVVGLLLAALACVSVLLALSLLQFFRLTTDQPV
AEIQVSRQNDNQYLVSARAEGLGQRDYTLYGDEWQIDAKVVRWRLPALMAGAPPLYRLERLSGRYRDVQREQSGTRSVYA
LDDWPVPDISAVKGWLPGWLPFVDVTYGSAAYMPLFEGARYQVLFDARGALFIRPADAATEAGLRQRGW
>AHV92869.1 phenylalanine--tRNA ligase, alpha subunit [Bordetella holmesii ATCC 51541]
MTLPVDDLVSQAQERFAAATDAAALENAKARFLGKEGALTVLLKFLAQLDPAAKREAGARINQAKQKVEELLNARRAQLA
QAELDARLASETIDVTLPGRGRAVGGIHPVIRTWERVEAIFRSIGFDVADGPEVENDWTNFTALNNPLDHPARSMQDTFY
VDMQDVDGLPLLLRTHTSPMQVRYARMHKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYTDFLRC
FFESDDLVVRFRPSFFPFTEPSAEIDMMFTSGPNRGRWLEISGSGQVHPQVVRNFGLDPERYIGFAFGSGLERLTMLRYG
VNDLRQFYEGDLRFLRQFNE
>AHV92870.1 ribosomal protein S12 methylthiotransferase RimO [Bordetella holmesii ATCC 51541]
MRTEGYEVTPEYNDADVVVVNTCGFIDSAKAESLDAIGEALAENGKVIVTGCMGVEESVIRDVHPSVLAVTGPQQYEQVV
RAVHTAAPPRQDHNPYVDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGNLVSRPVGDVLNEAERLVKAGVKEL
LVISQDTSAYGVDLKYRSGFWNGRPVKTRMTEMCDALSELGVWTRLHYVYPYPSVDDIIPLMADGRVLPYLDIPFQHASP
RILKAMKRPAFEDKTVARIHQWRAACPDLTIRSTFIVGFPGETEEDFQYLLDWMTEA
>AHV92871.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV92872.1 acetyl-CoA C-acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MAAGAESMSRAPYIAQGQRWGARMGDSVMVDMMTGALSDPFGRMHMGVTAENVAARFGVSRADQDALAAESHRRASAAIE
AGRFKDQIVPITLKTRKGEVVFDVDEHVRADVDVAGLSKLKPVFQKENGTVTAGNASGLNDGAGALVLMDGGVAARRGVK
PLARLVAYAHSGVDPDIMGIGPVPATQAALKRAGLTVDQLDVIEANEAFAAQACAVTRELALDPEKVNPNGSGISLGHPI
GATGAIITVKALYELQRIQGRYALVTMCIGGGQGIAAIFERV
>AHV92873.1 fecR family protein [Bordetella holmesii ATCC 51541]
MNRSIRCALLPLSIALAASAVQAQPAGSLNEDFLYRIRPADTLGGLARTYTGTADNWPALQRINKIVDPLALPVGLELRI
PLSMIPEVTGSAQVVSLAGKAMLNGQAVRPGSLLPEGGVLSTGEHSFVTVRLSDGSEITLPSNSAVRLHHLRRFEHVPLT
DTVISVEQGSMESQVAPEGKGVGRFEIRAPVAVTGVRGTRFRVQADAAGAAQAILEGNVRVQAHARDLAPTEAIVVREGQ
GARIGADGSVLGIQPLLPAPN
>AHV92874.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MILLQLIYSGIALGMIYAVIAFGYQLTFATSGTLNFGQGEALMLGALVGLTLVGLGVNYWVMIPIVCVFGFLQGMFVERV
GVRPAIKTRSEFGWIMATIALGIIFRNVAENIWGRDDLRFPSPLPEAPMKIMGANVLPMELLVVFGALAMMLLVELFNRK
SIYGKAFVATSNDRDAAGLMGISTGLVITFSYAMSSLTAAFAGVLVAPLTLTGATMGAVLGLKAFAVAIIGGLSSGMGVV
VGGLILGIAETTTGFYLSTGYKDVPGLVLLLLVLTFKPAGLFGKTAIKKV
>AHV92875.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MTQNDTPVIELRDVHKRFENRPDIAQRILSLAGRPVDRRTVHAVNGVSLSVVRGEVVGLVGESGCGKSTLGRVVAGLHHQ
SSGQLYYQGREVDSLQGADKLAYTLGVQMIFQDPQASLNPRQRLRQILGEALRVHNLAPKAEIAGRVDRALEEVGLDREY
RDRCPHQISGGQRQRIGIARALLVAPKFLVCDEPVAALDVSIQAQVINLFMDLREQHGFTYLFISHDLGVVRHISDRVAI
MYLGKIVELAKASEIFARPNHPYTQALMAEVPDVDRRARKFTPIRGEIPSPLNPPSGCTFHPRCPHAMPRCKEEIPELKT
IAAGHVSACHLNDNAA
>AHV92876.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MKQRSLLSLRTVTLATRLALGALGVTASAAWPLAAQAQTARSFDIPAGTLEEVLGRFGRDAGVLLSFRPEVTQGLDSAGL
RGSFTVQTGLERLLAGTGIEVRPQGAGGYVLERHGGVAQLQAITVAAQASSDGLPAPYAGGQVARGGSLGMLGSADVMDV
PFNTTNYTAQTLENQQARTLADVVVNEASVRTLTSSGGFGEDFQIRGYTVSSGDVGLNGLFGLTSSSRMPAAIMERVEVL
KGPGTLMNGVGPNGSIGGGINVVTKRAGDEPLTRLTATYQDKSQLGGMLDMGRRFGDNEEWGIRVNGVYHNGQTTLDGGS
QRQGMGALALDYRGERLRWSLDAYTQRERTDNFRPQVGFQSSVTELPSPPSGHRNFYPGTQLKLEDSTVASRLEYDINDA
VTVYAAGGYRYGTADQTFPPGPVDANGDFTARNAFYDSYSRTSTGEAGLRARFDTWGVKHNLALGATRLDQELGNFYLTS
TATTPSNIYNPSPLPDVTGHRGSPNKASKTALTSFTLADTLSFADDRLMITGGLRQQRVALDNYSTSTGDLTSSYDESAV
SPLAGVVFKPWSNVSLYGNFTSGLTRGGVAPATAANAGQVFSPYKSKQYEAGVKVDWGRVMTSASVFQIKRPNALTDPTT
NVYSFDGEQRNRGFELAATGEVVSGLRMMASATFYDAKITRSAGGVNDGNDANGVPDSTFNLGVDWDMPWVQGLSLNARV
IHTSSAWFNAANTIRLPSWTRYDVGARYSTRMMGHAIVFRANIENLFNKSYWLASGTYASVAAPRAVLLSAQIDF
>AHV92877.1 phosphate/phosphite/phosphonate ABC transporter, periplasmic binding family protein [Bordetella holmesii ATCC 51541]
MQAKRIVQTAFVLAVAAGSHTAFAADTCSNRGDLDVMYCDANKDLVADTPTEASKLKTPSTLVFTYTPVEDPAVYEDIFK
PFTNHLAQCTGKRVVFYQVQSNAAEIEAMRSGRLHVGGFSTGPTAYAVNIAGAVPFAVKGYADGFQGYNLIVIVKKDSPY
QKLTDLKGKKLAHTAPSSNSGHMAPVALFPKEGLTPDKDYKVVFSGKHDQSVMGVNSGDYDAAAVASDVFKRMAERGQIK
EEDFRVIYRSEKFPTSSFSYAHDLEPKFRDQMLKCFYDYRFPDEMKKAFDGADRFYPVTYKKDWAIVREVAESGGESFNR
AAYDRESAKNKGKQ
>AHV92878.1 nitrogen regulation protein NR [Bordetella holmesii ATCC 51541]
MKPVWIVDDDQAIRWVLEKALARAGIATRSFSQAADVLDALTRDMPSALVSDIRMPGGDGLDLLRQIKERHAGLPVIVMT
AFADLDSTVSAFQGGAFDYLAKPFDVNEAVALIQRAMQEVEPQTEAEADASVNDRYMMTQSSSTAMQEVFRAIGRLAQSK
VTVLITGESGTGKELVARALHGHGARAGGPFVALNAAAIPRDLLEAELFGHERGAFTGANTLRRGRFEEAHGGTLFLDEI
GDMPIELQTRLLRVLAEGSFYRVGGSQPVRVDVRIVAATHQPLEQRVEQGLFREDLFHRLNVIRLRLPPLRERTEDIPAL
ANHFLAVSAKTLGVPVKRLTPEAVAVLIRFDFPGNVRQLENFCHWLTVMAPGQTIDRNDLPPEIRAIEHVPSNPPLRVQG
YNDGGYLPPAQQGRPAAAGGSFGADDLPRSWQEALLKDAQYRLERGEPAVMATLTRQFEKILLQSALDASRGRRVEAASR
LGIGRNTITRKLRELGIAED
>AHV92879.1 polyribonucleotide nucleotidyltransferase [Bordetella holmesii ATCC 51541]
MLMVESEAQQLSEEIMLGGVVFGHEQMQAAVNAIHDLVRDAGKPEWNWAPAAKNDALIAAVTAAAQEGLTAAYQIREKQA
RTTKLRDVYADVSAKLAEQAAAAGQDAPDSVTVDNILFDLEARLVRSQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGS
ALFTRGETQALVVATLGTKQDEQIIDALMGEYRDRFMLHYNMPPFATGETGRIGVPKRREIGHGRLAKRSLVPVLPKPED
FQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPTTDHVAGVAMGLILEDGKFAVLTDILGDEDHLGDMDFKVAGTEN
GITALQMDIKIQGITKEIMQVALAQAREGRLHILGKMRDSLDGSRTELSAFAPRMLTIKINPEKIRDVIGKGGATIRALT
EETGTQIDISDDGTIVIASVDETQAKEAQRRIVELTADVEVGQVYDGSVLRLLDFGAIVQVLPGRDGLLHISEIANYRIA
NINDVLKVGQQVRVKVIEADDKGRLRLSVKAIGGIEQQQPPAADAPAAAPAEPQAE
>AHV92880.1 rhodocoxin reductase [Bordetella holmesii ATCC 51541]
MRQIVIIGGGHAAAQLCGSLAESAQELAITLISEEAHLPYHRPPLSKAFIKDSAAEPALLRPANAYADAGVQLLLGETTV
SIDRDRQTVTLASGTVLAYDELVLATGMRARRLPDLEPAPANLHYVRTVADAQRLRDALAAAASVTVLGGGFIGLEVAAT
AAALGKQVAVFESQSRLLARSVSPEISDLVSANLREAGISLHLGVSVEEVEVAGGQVRALRAGGQSHPVELLVAGIGAVP
ETRLAESAGLAVDNGVVVDSQMRTSDPHIYAIGDCTAFPYLRQGRAMRLESVQNANDQARVLAAVLCGQPAQYAALPWFW
SEQGALRLQIAGIAPAGCERRIRSGLKPGRLSVLHFLNGRLMCVESINAPLDHMAARKLLELADHPPAEVLLDPAVALKT
HC
>AHV92881.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MAQHQKLRLTSSERRASVALAGLFACRMLGLFLLLPVFAVAARGLPGGEDPARVGLALGMYGLTQAIMQIPFGLASDRWG
RRPVVVVGLILFIAGSVVCARADDVFWVTMGRAIQGAGAISAAVTAWLADATRDEVRTRAMAMVGASIGLSFALSLVLAP
VLVGWWGLHGLFWTIACLGLASLAVARWVVPVVPLTQARSMRRVRAKEVLLHGELLRLNFGVFVLHLIQVALFVVVPALL
ARTGGLDLRSLWHVYLPVILVSFVCMVPVIFVAEKHRAHRAALRASVAGLAVVCALLPLAAQAFLPLAIALTGFFIAFNV
LEALQPSLVSRVAPQEYKGLALGFYNTAQAAGLFTGGALGGWLASRTGPDGVFLAAAALSLLWLAAAWAMKPLR
>AHV92882.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MKDKCVLVTGATKGIGWALTQRLTDLGCHVVGIARNTTDVDFPGYLYACDLADAGRTEEVLREIREKFPVDAVVNNVGVV
APQPLGEIDLATLYRVLDLNVRVAVQVTQTFVESMKARRAGRIVNVASRAIHGSYDRTAYSAAKSALVGLTNTWALELAE
YGVTVNAVAPGPIETELFRRGHCLFAVG
>AHV92883.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MSVAVGWQIFALTGNALDLGLIGLAQFLPMMCLTLVVGHVADRYDRRRIVAVCMALEGAATLLLAVAAVQGFGGKALVYL
TVMVISSARAFEAPTLPTLIPAIVPRAWIPRATALSASSNQIAQIAGPALGGIGYGIGAGWIYGIASLMYVFGLVSILRV
RTERAPPHRAPTTWHTLFAGIRFIASRRLLLGTLSLDLFAVLLGGATALLPVFAKDILHAGPWALGALRAAPAVGAALMS
LMLARMTMERHVGRLLFGALFLFGLATIVFGLSTAIPLSLGALVVLGAADSISVVVRSSLVQLNTPDEMLGRVSAVNTLF
IGTSNQLGEFESGVTAAMFGTVAAVVLGGVGTIAVAGIWMWKFPELRKLTSLNAPA
>AHV92884.1 enoyl-(Acyl carrier) reductase family protein [Bordetella holmesii ATCC 51541]
MKALAGKRGLITGIANGNSIAWGCAKAFRAMGAELAITYLNDKALPHVEPLARQLDTTLLMPLDLNQSGQLEAVF
>AHV92885.1 3-hydroxyisobutyrate dehydrogenase [Bordetella holmesii ATCC 51541]
MSSIAFIGLGNMGAPMALNLVKAGHQVVVYDLVAEAVGTLTAAGASAATSADAAVTGAEIVITMLPASKHVEGLYLGSDL
LGKIEAGALVIDCSTIAPESSRKVAAAASARGLEMIDAPVSGGTGGAVAGSLTFIVGGAVAVLERARPVLEKMGKNIFHA
GDAGAGQVAKICNNMLLGILMAGTSEALALGVANGLDPKVLSDIIAKSSGRNWATELYNPWPGVMEHAPASKGYAGDFGV
DLMLKDLRLAAESALGSRSSIPLGELARNLYSLHSNGAAVGWTSPASSICLPTNASEDGGSGHAATRPQRLASGTCWRAY
TRVAQSLESACPPPNITVFFVPTGCAPPCWAPTMAWSRRPA
>AHV92886.1 putative cold shock protein A [Bordetella holmesii ATCC 51541]
MKTEIGVVKWFNSEKGFGFIMPESGGKDLFAHFSEIVGSGYKSLEENQRVSFVEGMGPKGPCATKIEVI
>AHV92887.1 NADH dehydrogenase (quinone), D subunit [Bordetella holmesii ATCC 51541]
MAEIKNYTLNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAEHKTFIQALPYMDRLDYVSMMCNEHAYVM
AIEKMLGIEAPLRAQYIRVMFDEITRILNHLMSLGSHALDVGAMAVFLYAFREREDLMDCYEAVSGARMHAAYYRPGGVY
RDLPDAMSQYGASSKYRGDKELRIMNDARSGSLLDFIEDFTNRFPACVDEYETLLTDNRIWKQRLVGIGVVDPDRAKALG
FTGPMLRGSGVAWDLRKTQPYEVYDLMDFDVPVGVNGDCYDRYLVRVAELRESNRIIRQCVEWLRNNPGPVMIENHKVAP
PKRTDMKSNMEELIHHFKLFTEGFHVPPGEAYGAVEHPKGEFGIYLVSDGANKPYRLKIRAPGFAHLQSLDEMSRGHMIA
DAVTIIGTQDIVFGEIDR
>AHV92888.1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein [Bordetella holmesii ATCC 51541]
MLQPTDSLLRILCSKAERAPLTQALAQAPFAWRLQQPEQAFDIAFISRDITGKSTKFRVEPETAVYYDALRRNTRLRWVH
VHSAGADRQIYLDLAARGVSVTTSQGASDAVVAQTALAGLLSLARKLPLLARQQREHPWQTLDEREPRDLAGQHAVIVGW
GGIGQRIGASLKALGMSLTVLRNSDTRWPRPSAACPMTGWPKPCPGPIG
>AHV92889.1 succinate dehydrogenase, hydrophobic membrane anchor protein [Bordetella holmesii ATCC 51541]
MQDTKNYGPKRLVVGAHYGTMDFIAQRLTAVIMAIYTLVLIIGLLVMPAYNYENWKALFTFHVFALPVGQILASLAFFAL
AWHAWIGVRDIWMDYVRPVGVRLLLQVLTILWLVGTVVYFAQIIWRI
>AHV92890.1 dipeptide ABC superfamily ATP binding cassette transporter, binding domain protein [Bordetella holmesii ATCC 51541]
MTVDPVERKKLLQQATQIALDNVPLVPLHFESSIWAFRKGLTYEGRRDQYTLATSVKPADKK
>AHV92891.1 hypothetical protein D560_3595 [Bordetella holmesii ATCC 51541]
MADAPRLPTIFLYTEEQLGNQLVESEVMGILSDISGTEKYVVVRDPNAGLQYVYRVDYDSGNLDAVAMLDVGQDQFDGRH
RTAISAMAYRLGTPDAAMKLLRGKTHWIQDNGAVLSVLLQNAASRAAGFSLRRIHRPRVQQIPAGTAVQRLPRPADDQAV
PASWLAEHGGER
>AHV92892.1 TRAP transporter, 4TM/12TM fusion family protein [Bordetella holmesii ATCC 51541]
MEIDHDKTQKLAEHYDSEIRFRPLDKTATWIVSLLLVTLSVFHYYTAGFGLLREATHRGVHLAFVLSLIFLVFGFSKAHY
QREPKSTWYSPGGVPLYDWIIAIVLALSVLYIPYIFEDLAFRVGNPLTMDVVMGSILILGLLEGTRRAMGWPLPIIALVF
LAYAAFGPYFPGLLKHAGNSWSQIVNHMYLTSQGIYGVAVGVVATYVFHFVLFGVLATRIGLGQLFLDIASTIAGRYAGG
PAKVSVFGSAMFGMLSGSSVANAVTVGSLTIPAMIRIGYPRHFAGAVEAASSTGGQITPPIMGAAAFLMIEFLGIPYQDI
AIAGIFPAFLYFFGMFMQVHFEAKREGLRGLTAEEMPKLRASFKMRWPTLIPLILLIGVLASGRTPYLAAFAGITGCIVV
GLLNPFQRLRWRDLYEAFETGAKYALAVGAAAGTVGLVIGVVTLTGVGFKISYIVIMASQVIASGVGSVIPEVVANAQSL
TQIAALVMTGIVCVIMGCGVPTTANYLIMVAVAAPTLVQLGVQPIAAHFFVFYFGILADITPRWRWPPTRRPAWRAAIP
>AHV92893.1 slyX family protein [Bordetella holmesii ATCC 51541]
MEHEHELAARVTELEIKLGFAEDLLEQLNLLVFEQQKQIEAMAAQIGQLRNQQTDGANGPWRSLLDERPPHY
>AHV92894.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MVEFKNVTKRFGDSVVLNGITVNVDAGEVVVVVGPSGSGKSTFLRCINVLETIDGGDLHVDGISVLGSSEDVRTIRREAG
MVFQQFNLFPQMTALENVMFGPLHTRGTSRDEARQVARELLGKVGLSERMDHYPAELSGGQQQRVAIARALAIKPKLMLF
DEPTSALDPELRHEVLKVMRDLAVEGMTMVVVTHEMEFARKVGSRLLFIDGGKIAHDGKPQALLSDPPSQRLRDFLQHVA
>AHV92895.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92896.1 concanavalin A-like lectin/glucanases superfamily protein [Bordetella holmesii ATCC 51541]
MNLIYSVSAGRSVATARATVVYTKPVALLESLRAGLTMFFPFEGALTDLANGGGAITPYDGVQQPAFAQHGVFGQMFQNE
RGSAASGAFKLDHPAGMLTTPNAFTIGFWYQSDGVANDRSIVGNKNYNTGANPGITIAQWAGPELRFNLAGGARVDINGV
RFTPNKPIYIAMVINKTAKTMEAYVYDPELGFSRRSVATGSVNFAQVEGSLGPHIGLNEDGVGTYGVCCAGTKGPYTMYF
DDLGIWSRALTEAEVRSIALSGRSVQELFR
>AHV92897.1 FAD dependent oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MLANCTAGRYAVNKERMLRLAEYSRDCLRELRDETAIQYEQRTQGTLQLFRTEAQMQAARRDMAVLEDVGVPYELLDRNR
LPVAEPALARSLNKLVGGLRLPNDETGDCRRFTRALAELARGMGVQFRFNQAVDGLVVENGRIGGVRVADELLRADAYVA
AFGSYTRDFLAPLGLDLPVYPVKGYSLTIPMTDAAAAPVSTVLDETYKIAITRFDERIRVGGMAELAGFDLRLKPQRRAT
LEMVVQDLFPGAGDVAGAEFWTGLRPMTPDSTPIVGPTRYDNLFLNTGHGTLGWTMSCGSGRLMADIVMGCQPAIRADDL
AISRYQRTARAAGDLRLGQNGA
>AHV92898.1 site-specific recombinase family protein [Bordetella holmesii ATCC 51541]
MLRLWQRWKASRTAGHQLDSLLAAARPDADLVERNLWVIELALWIRRARAAPAGASGSHPQLARLRYLLHVLDRQPETRE
RFAQTLRSVVADNDPLSLFCDTGVASQPGFWGEMVERVQARYLPLPPNRSDMFAIFSLVFTSEDDADWLRAIDEDTLERL
RDLLQVPDSRRDPALGMDADRLPGFEQALVNSSSARFAPPV
>AHV92899.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MKTVPPPHPNPRAPRYKLPQGSCDCHVHVYGPAERFPYAPERRYDPPDAPIETLQPLHRLLGVERAVLVQATVHGTDNRA
MLDAIAREPQRYRGVALVDDDISAAQLRALHEQGVRGLRYNFMPHLGPSADLGAVTRMARRVADLGWHIQLHAHAAELAQ
MQSFLHALPVPYVIDHMARVMADAMQPELDQLLRVLEHPGAWIKVSGPERLSATLSASEPPYADVVPIARRILGVAGERA
VWGLDWPHPNVREVPDDGDLIDILPLYGDAGVLQQLLVDNPQRLYFQN
>AHV92900.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTHECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92901.1 flavohemoprotein [Bordetella holmesii ATCC 51541]
MLSTTVRELVKSTAPVLKTHGEALTRHFYARMFEGNPELKQVFNQGHQQSGQQQQALALAVAAYAEHIDDPSVLAPVLTR
IAHKHVSLGIRPEHYAVVGKHLLASIREVLGEAASDALIHAWAAAYGQLADVLIGMESKLYAAAASQAGGWTGWRGFRVV
GKVPESAEITSFYLRPADGGALPDFLPGQYLSLRLYVPELGLMQPRQYSLSDAPGKDSLRISVKREPAGSGPAGRVSNRL
HDHVHEGHVLDVAAPQGDFALDVQADTPVVMISGGVGITPMMAMFNTLLQRQAAGGPARELRFVHACRNGAVHAMREPVA
QAASRHANVRRHVFYEEVAPSDRQGVDYDYAGRIDWQRIAAEVMLPEADYYLCGPLPFMRAQHESLTALGVPVGRIHAEA
FGTGGPGW
>AHV92902.1 hypothetical protein D560_2018 [Bordetella holmesii ATCC 51541]
MSTPEQFHALMREVTEQIGPADLDQALEDRLNRDLGAGSDLYQRIFEACRQGAAAGWMCQYEGGGIRYGRVFKPDPALSG
YSVDVVDMNDLAGPHHRHPQGEIDLVMPLSGEARFDGRGAGWLVYGPDSAHRPTVSGGQALVLYLLPAGSIEFTRQTA
>AHV92903.1 parB-like nuclease family protein [Bordetella holmesii ATCC 51541]
MQAAKSRMGMQYRRWMAALALPLVLAGCNGGGDDDDEQVSTTPPQTAPEQTPPASTEPTRNTVYLDAKAGDVIAVRIEEL
LPTQAAIGYDQIYYKLGRWQGDFNRSTWQANATQMLDYLNRTVGKKFDDYCEDTGQTSRAQDFQTIAEASAARLDDATTF
ACKDAPGTNADAMKTVVVGWDGNLYLTDGHHSFSSLREIADGGPKLKVWVKVDANYSDMTSSAAFWQRMVDEGRAWLRDG
NNQAITVDQLPTRLGLANANEAGGMQEDPYRSLVYFTRDIGYTNSGLPEFAEFLWGDWLRKETEAGRLQPMSAFNLKAPA
AAADILAVSTLKKDLSRADSATSYAAMAREASLRMTALADADVVYGDRTAARLGRVKLVPNADSGTPTKTARDTLEELPR
NDAKSDLSPRGAGKLWFAVNYRNCGRPAAGTCWGW
>AHV92904.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MSFSIAHPPLGLTELEARLRQDLAWLDLPARDWVPARQSEGHTLFEVVIIGAGMAGMAACAALKQHGVRAVCLDRSPQGC
EGPWATTARMQTLRSPKQLTGPALGLPALTFRAWFEAQYGATAWQALDKIPRLQWMDYLRWYRRVLELDIRNDHRVAAVL
PRPDGVVELAVESPQGVQQMLARHVVVATGRDGLGGPALPAFAQRLPRACWAHSSDAMDYQTLAGKRVAVIGAGASAMDS
AATALEAGAVSVDMLIRRDDIPRVNKGKGAGNPGLTHGHLSLPDEWKWRFRHYINTQQVPPPRGSTLRVSQHANARFNLG
CPIVDVHADVSGIHLTTPKGVFEVDFVIFSTGFKLDWQAHPEFAAIAPHIRLWGDRYQPAPGAEDQELQDSPDLGPVFEF
QEKSPGACPGLERVHCFCYSAALSHGSVSGDIPAVSEGARRLAQGIAGQFYAEDVEHHFANMLAYAEPEVFGDEWTAAPP
PGARS
>AHV92905.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV92906.1 SIS domain protein [Bordetella holmesii ATCC 51541]
MPAELPMTPRARLDHLPPELQRAARWVFLGTRSAFGIAYQMRYAFQMLRSNGLLLDGLGGMTAEEADLLQEGDALVVISQ
APYPTACVRLARQASSEV
>AHV92907.1 tRNA modification GTPase TrmE [Bordetella holmesii ATCC 51541]
MSNAFPIAAIATAPGRGGIGVVRVSGPSLHTYVRALLGRELAPRHAHYLPFTDAHGQAIDEGIAIYFRGPSSYTGEDVLE
LQGHGGPAVLKRLLARCLEAGRDIGLRLAEPGEFTRRAFLNDRIDLAQAEAVADLIDASSEAAARGAMASLSGEFSQRVT
ALADRIVHLRMLVEATLDFPEEEIDFLEKYQARPTLDGLRTDLDTLIVQARQGVILREGLHVVLAGQPNVGKSSLLNALA
GDDVAIVTPIAGTTRDKVVQEIHIDGVPLHIVDTAGLRDTEDTVESIGIARSWKEIERADVILHLQDASAPGDILDAEIT
ARLPARTPVLTVLNKIDLLTLPAELRADQIGISAKQGLGLDALRARLLRLAGWNPGAESPWLARERHLHALQAAHEHLDI
AALHASHDDRVLDLFAEELRLAHDSLSSITGRFTSDDLLGEIFSSFCIGK
>AHV92908.1 hypothetical protein D560_0502 [Bordetella holmesii ATCC 51541]
MVPVAAESWPSSPTDATTYETLCNLILDEVRKGGYDAILLDLHGAMVAKGMEDAEGALLHRLREIDPATPIGVTLDMHAN
IYDDIVRNANVVTGFHTYPHVDIRESGVRAANIIARTLKGEVKPVMRWGNVPMLPHIMCQGTHADPNKSLQARCIELEQG
AVLAASVFVGFPHADINQAGLSAVVCTDDNAPAATRYCDELLDAAWQRREQWVFHPQPLEPTVAHAKTLTEGPVVLLDHF
DNTGSGGTMDTTAMLAEILRQELENLAFYAICDPQAAEEAAAAGVGRTITVELGGKVPMPALKVQSAPLTVTARVKLVFD
GVYLNRGPMYRSVRNDTGFTVVLDTGKVEIVVVSRHQEPFDINCLLSAGIDPLQKRYVVLKSRVHWRAGFSEMATDIIEC
TGVGVTTSDYSQIEFKHVRRPIYPLDAM
>AHV92909.1 heme ABC exporter, ATP-binding protein CcmA [Bordetella holmesii ATCC 51541]
MAQYVYTMNRVGKIVPPKRQILRDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDKEIEGEAIPMPGLNIGYLPQEPQL
NPEHTVRESVEEGLGAVFNAKKRLDEVYSAYAEPDADFDALAAEQAELEAVIAAAASNGADDIEHQMEIAADALRLPPWD
ATVGNLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAESVEWLEQFLHKFPGTVVAVTHDRYFLDNAAEWILELDRGHG
IPWKGNYSSWLEQKEARLKQEEASESARQKTIKKELEWVRQNPKGRQAKAKARIARFEELSSYEYQKRNETQEIFIPVGD
RLGNEAIEFDHVSKAYGDRLLFDDLSFKVPPGAIVGIIGPNGAGKSTLFRMLAGREQPDSGEIKRGQTVKLAYVDQSRDS
LDAVKTVFDAVADGADILTVGKFEMPSRAYLGRFNFKGGDQNKIVGQLSGGERGRLHLAKTLIAGGNVLLLDEPSNDLDV
ETLRALEDALLEFPGSVMVISHDRWFLDRIATHILAFEGDSQVVFFDGNYQEYEADKKRRLGDEGAKPKRLRYKALK
>AHV92910.1 oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MSQATELDDPRPQPPEAPGSNECCQSGCIPCVYDFYDEAMSDYREALKAWLQRHPENGG
>AHV92911.1 low affinity iron permease family protein [Bordetella holmesii ATCC 51541]
MTQSRSSAASQHCPSPDASRPAIAFDRFARFATRWAGSSLAFVTAFALVLGWAVSGPVFGYSQTWQLVINTGTTIVTFLM
VFLIQQSQNKDSQAVHLKLDELLLALKGANDGLVDAENLDEAQLRKLAEHYAAVAKTLQGHLHRLDGDAH
>AHV92912.1 transposase family protein [Bordetella holmesii ATCC 51541]
MAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV92913.1 SPFH domain / Band 7 family protein [Bordetella holmesii ATCC 51541]
MLVVVVVLALLVVIKAIAIVPQQHAWVVERLGKFDRVLSPGADFVIPFIERVAYKHSLKEIPLDVPSQVCITRDNTQLQV
DGVLYFQVTDAMRASYGSSNYISAITQLSQTTLRSVIGKLELDRTFEERDFINTTIVASLDEAALNWGVKVLRYEIKDLT
PPAEILRAMQAQITAEREKRALIAASEGRRQEQINIATGEREAAIARSEGEKQAQINKAQGEAAAVLAIAEATAKAITQV
GDAVRQPGGMEAVNLKVAERYVEAFGEVAKEGNTLILPSNLSDVGGLVASAMTIVKSTRT
>AHV92914.1 alpha/beta hydrolase family protein [Bordetella holmesii ATCC 51541]
MLYTDVMRQRGNQYLVHMAKHEPNVLAMDSEVLLDAREFQRPVNYMLLRIVPPAETPADPEKRPFLVVDPRAGHGPGIGG
FKPESEIGVAVRAGHPCYFASFLPQPTATQTVEDVMRAEARFLEEIIARHPDAEGKPVVVGNCQAGWQIMMTAAMRPELF
GPIIVAGAPLSYWAGWRHKNPMRYSGGLLGGSWLTEMTSDMGNGKFDGAWLVQNFENLNPANTLWSKQYNLYSKVDTEAP
RYLEFEK
>AHV92915.1 fumarylacetoacetate (FAA) hydrolase family protein [Bordetella holmesii ATCC 51541]
MKLISFLFDSQASYGVLQDQYVLDLGAHYGAQAPDLKTFLAAGLPADVGAPRRELAGLRLLPVIPNPGQIFCVGLNYADH
VKETGRQSTEHPTIFMRVADSQVAHGEAIVLPAESSRLDYEGEIAIVIGKAGRRIAEADAGDYIAGYACYNDGSIRDWQT
ATSQWTAGKNFWRTGGFGPWLVTADEIPFGSPMTLVTRLNGQEMQRTTTDLLIHSFARQIAHLSTFTPLAVGDVIVTGTP
GGVGAKRQPPVFMRQGDVVEIEVDRIGVLRNTVATE
>AHV92916.1 formyltetrahydrofolate deformylase [Bordetella holmesii ATCC 51541]
MQHNDYILTLSCPDRTGIVYRVSGLLFELGCNILDSQQFGDEETGRFFLRVHFDLPGEGNAAMLRETFATVATDYGMDWQ
IHDARQKPRLLIMVSKQGHCLNDLLFRVGSGQLHAEIAAIVSNHDDYAGLAASYGIPFHHLPVTADTKTAQEHQVLELVE
RERIDLVVLARYMQILSADLCHALAGRAINIHHSFLPSFKGARPYHQAHARGVKLIGATAHYVTSDLDEGPIIEQDIERV
DHTMTAQDLTQVGSDIESMVLSRAVRSHVEHRILLNRNKTVVFR
>AHV92917.1 putative lysine decarboxylase family protein [Bordetella holmesii ATCC 51541]
MIMSEIGIAAEKLADIGPAVSVFGSARISRNSPYYETAVAIAAALAREGFAVIAGGGPGIMEAANKGAFEADGTSVGLNI
SLPHEAHNNAYQSISLSFEYFYSRKATFFMHSMAYVSMPGGFGTLDELFEALTLIQTGKVPPAPIVLVGSEFWHGMIDWM
GAQLLGNGMIGAHDLDLFIIEDDPEKAVRHIVEFHRKKQSPEEQYAPSLPA
>AHV92918.1 chaperone protein DnaJ [Bordetella holmesii ATCC 51541]
MAKRDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAG
MGGGMGGGMGGGMGGGFADAFGDIFGEIFGAGRRGGGGPQVYRGADLKYALEITLEQAASGFDTEIRVPSWENCDTCHGS
GAKAGTSPKTCRTCGGSGAVRMQQGFFSVQQTCPTCHGTGKEITDPCPSCDGVGRTRRNKTLQVKIPAGIDDGMRIRSSG
NGEPGINGGPPGDLYVEIHIKQHKIFQRDGDDLHCELTIPFTTAALGGELQVPTLGGKAEISIPEGTQSGKTFRLRAKGI
HGVRGSYPGDLYCHVVVETPVRLSDEQKAILRQFEASLNDGGGRHSPQSKSWTDRVKEFFS
>AHV92919.1 hypothetical protein D560_3420 [Bordetella holmesii ATCC 51541]
MNTRADNPVAFGRPPADIDARGADRQADAVAAPDNPAVQVSINAKVLPPTSLVDVPNFPPKIPRDDNEALSDRLPAMDEQ
TESNWADGSEPQPRAKNARSSLF
>AHV92920.1 dienelactone hydrolase family protein [Bordetella holmesii ATCC 51541]
MVLKDAEFDSLLPPLRLGRRGFLATGLAAGFSLAAGPAVAQTAITTDSKGLVAGPVDIPTTDGTMPAYRAAPQGKSDLPT
LLVVSEIFGVHEYIQDVCRRLAHQGYLAIAPKLFARQGDPSKHADMASLRAEIIDKVADAQVMADLDATATWAAAHGANA
SRLGILGFCWGGRIVWLYAAHRPGLLAGAAWYGQLGGASTGLKPRAALDVVPALQAPVLGAYGGKDAGIALADVDKMKVA
LAKGPPAAQKSRIDVYPDAPHAFHADYRPSFRKAEAEQAWRRMLDWFKQNGL
>AHV92921.1 hypothetical protein D560_2685 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSASP
>AHV92922.1 arginine/agmatine antiporter [Bordetella holmesii ATCC 51541]
MSSTKPIDQKLGLVALVAIVVSSMIGSGVDSLPQNMAETSALGPVVIAWLISGFGMFFIARTFMVLSDLRPDLQSGIYMY
AREGFGPLSAFVVAWGYWLMTIFSNVAFAVMVMDTLNYFMPGDFTGGNNLASIVGASILIWGFHVLVLAGTKMAGMINTV
GTFVKLIPLVVFVGVVTYFLNYAQLTTDIWGHHPVGDAKPLGSILSQTLSPMYVALWCFIGVEGAVALSGRARNKKDVAR
ATMIGCILGLLICLIVSVLPFGVMSQQVLSHIPNPSTAGVMKKLTGDWGEWLINIGVLISILTSWLAWTMICAEIPQVAG
RNGTFPKIFAIENKNGAASTALWVSSGIMQCVMLMVYFSQHAWLTLLGISAICVLPAYFSSASYLIKTCFNGEYTQRQST
GRMLALFSSLVGAGFCLFMLYASNIQYVAMSPLLLSLGLPLFFWARRQQGSDAGALNRGEKTALALLLAIDILVIALYFM
GHIKL
>AHV92923.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MSVAQTQAPPAAGPRMPPFAAVATTALLAVLAMVLTNDFYLRILFMCGVYYLCAAGMNVLAGYAGQKSLGQAGLFAAGAY
AAALLTTRWGWHPAWALLAAPLAAALVGLLIALPSLRVKGPSLALVTLAFGIVVEKLVTEWTDVFGGAQGIYGIAPLAWA
DAPFSLQQWVWLVLGLSLLVHLVLKRVLQGRFGRALLSLQFDEIAAACSGIAVYRYKTLAFMVAAALCGLAGALVAQQNQ
YFNSDFITFHLSVFILLLVLLGGAGTIYGPLAGAVVLTLAEVFLAQRPFAQHFIYGAMLLFALYLMPRGIVGLFDRRRTP
AAGPTGVQTCEPALPHRHVAADVPLLQLKGICKNFGGVMTAQNIDLVLQPRHIHALIGPNGAGKSTLINILTGVIAPSAG
TLMLQGRDMTHAGAHKLAAAGVARTFQNLRLFGVLSVLDNVLVGAHTRLEQGVSEAQARQEALDVLAFTGLSGYAQAVAG
SLPYGVQRRVELARALASRPALLLLDEPAAGLNPQETRELGQLVRRIGALGVAVLLVEHDMSLVMNISDHIVVLDRGIVI
AEGNPRQIQHDPRVIEAYLGTDTGWED
>AHV92924.1 NMT1-like family protein [Bordetella holmesii ATCC 51541]
MNTLSKTVARAALLILLTTTAAAQAAEVVRIGVATAGGGDPITWGGSPGGVVRATQALEEAFKDDGVKVEWLFFKGAGPA
VNEALSNKQIDFAYQGDLPQVVGRANGLKTKLLLVSGARNNLYVVAPPASTLSRIEDLKDHKVSIFRGTNGHLVAINVLA
AHGLAERDIKSVNLDTGSAQAALVSNGVDAAFGGYEWFKVRDKGLAKVIYSTQGQDPAFTRQASLLVREDFERENPAQVQ
KVVDVFVQAAKWASDEKNRDALFKIWEKSGVPYASWAAEFDKQDLAVRNSPLVDDFIIARYKAVAADALKEKLICRPVAI
DGWFDTRYIDQALKTQGLTGHWTPFDASGLPASQAPQASTR
>AHV92925.1 phosphoribosyl transferase domain protein [Bordetella holmesii ATCC 51541]
MHDVTASMRGPAARCPVCAARLPQAGGPLCAACLRRQPRFGRCVAAFDYAFPGDGLVQAYKGQNRLVLARAVGALMVCAW
RRRGVADPVVLVPVPASAAALRRRGFNPAAELARVVAQRQNLALCRQGLRRMRLRAPQRGRIRRDRWRGLRGLFAADARL
AGHDILLIDDVVTTGATAHAAALALRQVGARCVGILAAARTPAPGWHNTP
>AHV92926.1 cobQ/CobB/MinD/ParA nucleotide binding domain protein [Bordetella holmesii ATCC 51541]
MSITIDQIRGVLRTVSDPNTGLPLGSSVKDRDIQIEGGLVRVLIEQGYPGREAQAQLAELARSALAGAGVTQAEIAVAVR
VQPHAVQRGLKPLPNVRNIIAVASGKGGVGKSTTSVNLALSLAAEGASVGVLDADIYGPSIPTMLGISGRPESLDNKSME
PLVGHGIQANSIGFLIDADSPAIWRGPMVTQALEQLLRQTNWRDLDYLIVDMPPGTGDVALTLAQKVPVVGAVIVTTPQD
VALLDARKGLRMFQKVEVPILGVVENMAIHICTQCGHAEPIFGEGGGQRMAAQYEVPWLGSLPLTLAIREQTDSGTPTVV
ADPQGEAAGLYRAIARKVAAQVAALPKDMAGKMPGVVVQPQRPS
>AHV92927.1 tonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein [Bordetella holmesii ATCC 51541]
MFEPKPLALAALFLPSLAISSPNDDASDSRLIFTLPAQQVVADSVELSRSELNQTDIDRAQADNFASLVDRLPGIAMAGS
ARPGGQSLNIWGLGDTEDVKLVLDGAPKGFEKYRQGSVFIEPELIRRITVDKGPHNLLDGTAGFGGTVRIDTKDAGELLA
PEQRFGGLVKYGRHSNDGQDIYSGALFGRTDHADGLIYVNRRDGGNLRRPDGSRFPFSGNNAQSYLAKTNLYLGTSHSLS
VSAMQSTAHGWQPFAAKRDDLPAPSLADIRRWGLTGAWRRRLVYRDQSDRTLSARYTYAPADQPWLNLTLSYAHSRTAQH
DRRPDNASRSAFLGTLGNRSWVDYRDRVLELRNLASIAAGSVEHGLLLAARWHQHDRDTLMYYPAGSRDRDYNYGYFQPY
YMPAGRQTVRSLVVQDAIRVAAVTITPGVRYDHVVNLGHPNDAPRYNSPLPSVGHDYRRVTYTGWTPHLGALWKAQPWLD
LLADVTRGWRAPVIDEQYEVQYARASVTGTSRSLRPERILGWRAGAIVTLKDVLAPRDNLVLRATVFGNRGKDEIFVRRG
VLCANSPCERPLSNYRNLPGYHIEGLELESAYDSARWFGKLSLSAIRGRRDTSPRDPAGQRSWIAEIPPLAAHAMLGLKL
ARYGMAVGWTADFVRRQDRSPTQSDPLAVFWALPASSGYALHGLFAHWQPPQWKGLHVRVTVDNLFNRDYRPYLGESVAG
LGRNVKLSLSQRF
>AHV92928.1 hypothetical protein D560_3825 [Bordetella holmesii ATCC 51541]
MVTPLWIGCGAGFSGDRLDAALPVVRTLARRPGRRVLILETLAERTLALAQLARRENPQAGYEPLLEPLLRPVLELCLTE
RIAIVSNFGAANPSGAAQHILRLAKAMNLRAPKVAIVHGDDLLARADAQTLIAQAGLARPAALVSANVYLGAEAIAAALL
DGADIVVTGRVADPSLVCGPALAHYGWSPQDWDRLGPATMAGHLLECGSQVTGGYFADPGFKDVPDLWNLGFPVAEILPD
GHCIVGKADDTGGIVDRRTVTEQLLYELHDPAAYLTPDVTADISVATLTDLGADRVALAGVRGHRRPDTLKVRAFYEGGW
LGEAEISYGGPRAETRARLAADVIRRRLGGELRVDLIGVQSLLADDEGRFMSVLADGGARDVRLRVAGKYSAREEADTLA
REVNALYCCCPAGGGGVRSAVRRRLETRSAYIDRNLVNATHEVLA
>AHV92929.1 50S ribosomal protein L23 [Bordetella holmesii ATCC 51541]
MNAERLMQVILAPVVTEKATFVAEKNQQIAFRVVADATKPEIKAAVELLFKVQVEAVQVLNRKGKVKRFGRFVGRRRNER
KAYVSLKDGQEIDFAEVK
>AHV92930.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92931.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MSTVSSSPVRIVIGTWDRLREHATSVRHEVFVLEQNVPTEIELGDEDAVSVHAVAYDLEDRPVGTGRLLLDGHIGRMAVR
KSVRGTGVGGRVLDALIEQGHGEGEGHRMLVLHAQTHAKAFYEAHGFRADGDEFVEAGIPHVVMVRELTRTP
>AHV92932.1 helicase conserved C-terminal domain protein [Bordetella holmesii ATCC 51541]
MTTSSSFADLGLADTLLRAIAETGYTAPTPIQAQAIPQVLRGGDLLAAAQTGTGKTAGFTLPILHLLSQTKPAKRQPGRP
RCLILTPTRELTAQVAESVQVYGKHTSLTSMVMFGSVNINPQISALRKPVDILVATPGRLLDHAGQRTVDLSGVEILVLD
EADRMLDMGFIRDIRKVLALLPKSRQNLLFSATFSEEIRELARGVLNNPGEVSVTPRNTATELVTQTVHIVDQAHKRDLV
SHLIRESGWHQVLVFTRTKHGANRLAEKLVKDGLSAAAIHGNKSQSARTRALAGFKDGSVAVLVATDIAARGLDIDQLPQ
VVNFELPNVPEDYVHRIGRTGRAGATGAAVSLVDNSEIKLLKAIERLIKKTIDRKTVEDWTPPVGVAAEAEPHDDEERGF
GRRNGRGGSSGRSNGNGNRGNGPTRGVLLGK
>AHV92933.1 rieske domain protein [Bordetella holmesii ATCC 51541]
MSSKIQDQHERAVSTGGTTVKKLIPYGGYFTNSVPGHDPELTEVGPGTPAGEYLRRFWHPVCMSMELTDTPRFLKIMGEE
LVAFRDGSGSIGLLHAHCVHRGASLEYGKIEQHGISCCYHGMVFDVDGTCLRVPFPEGEEEEGERYRCSIRQGAYKAFER
NGLVFAYMGPPDEEPPFPEWEGDFTVAETDELVPYSNFQHCNWLQVQDNAADNYHTMALHAKRQVTGEHYQGTTFDEVGA
ASMEVPPDMQFVPVHGGRSLACAGARRSDDERMHIRVQHQVLPNFSLHAYTSEDGKKKKLFSRFHMIRWTVPVDDHNSKM
IGWRVMGPGVDTRGIGDKSMVGYETIDFLEGQVAMRRPERFGQYALEDLPPIPPDHRARANYKDCQYAPGDYEAIISQRP
IAVHALENPTKFDAGLYVFRKLLRDAVRGKNPNASPEQFAQWLRDCSGNPNSYCSGNVFELPVGRTTEEEITLRRHLARQ
VVQIITEADGLRGAQRHAFVTDKMEALQQEVLARRMA
>AHV92934.1 phosphoserine transaminase [Bordetella holmesii ATCC 51541]
MARPWNFSAGPSVLPEVVLQQAAAEMLDWHGSGMSVMEMSHRGRQFVQICDEAETDLRELMNLPADYAVMFMQGGGLGEN
AIVPMNLIGRRGVPAADFVVTGHWSTRSHKEAGRYGDARIAASSAQAADIDGRAQRPFTWVPPVQNWQVRPEAAYLHLCS
NETIGGVEFIDWPDLAELGAPDVPLVVDASSHFLSRPLDVTRTGLMFAGAQKNAGPAGVTVVIARRDLLGKALPICPSAF
DYANVAAEHSRYNTPPTFAIYVAGLVYKWVKAQGGVEGLETANKAKADLLYGYLDASDFYHNPVEPSVRSRMNVPFVLRD
DSLNDAFLQGAEAAGLLALKGHKSVGGMRASIYNAMPLSGVQALVDYLTEFERRYG
>AHV92935.1 molybdopterin oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MLNMNRRQFFKVTGSTLAGSSLAMLGVAPGNAMAEVRQYKLARMKETRNTCPYCSVACGILMYGLGHGAKNAKASIVHIE
GDADHPVNRGTLCPKGAGLIDFIHSPNRLTYPEYRAPGSDKWQRVSWDEAMTRIAKLMKDDRDANFVQKTADGKTVNRWL
TTGMLAASASSNEVGYITHKVVRSMGMLAFDNQARV
>AHV92936.1 hypothetical protein D560_0221 [Bordetella holmesii ATCC 51541]
MFNPSRDQVREFFIETWRKHRATEVLTPLESMALDWILEHPEYHGDLESPEAMTAEYPVEHGRTNPFLHLSMHLAIAEQL
SIDHPRGIRAAYQRLVGRGDAHQAAHEIMECLGQVVWEAQRLGTPLDSDAYIELIRQRAER
>AHV92937.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MRSTGLRKTYNGRTVVQDVSLSVESGEVVGLLGPNGAGKTTSFYMIVGLVPADAGRIEIDGNEITSMPIHKRARMGLSYL
PQDASVFRRLTVEQNIRAVLELQVDAQGKTLTAAKINENLESLLEELQIGHIRSNTAISLSGGERRRVEIARALATNPRF
ILLDEPFAGVDPIAVIEIQRIVRFLKSRGIGVLITDHNVRETLGICDRAYIISEGKVLTDGHPDEIVGDPAVRRVYLGEH
FRM
>AHV92938.1 NMT1-like family protein [Bordetella holmesii ATCC 51541]
MSQRTSAINLSRRRLVQSAALGAACLGLPALGRAQSGPVIRIGFWPVAAGLPFYAAVEKGYFKEAGLNVEPQKFAGAQQV
MEAMLAGRSDGSANGTGSANLAIGEIASPGLFKIFASNPSNAQYVLDEFIVAKDSPVRSIAELKGKKVGSGPGIQNATLA
RTVLERAGATGATVVELAISQHVAAVAAGQLDACYTLEPTGTVGRLNGTTRVLEAGVIAKYVLGDPMAPWFGGSASLTTA
FLKKHPEESKRFIQAYARGIDLVRKHPDEARQYMKGYTAIEGPMTQEVPLAAYTLYNEFTDSDVQYFQKFFDLFADKGVF
AQKVDVASMLYKG
>AHV92939.1 DNA polymerase III, epsilon subunit [Bordetella holmesii ATCC 51541]
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRGVTGRNLHIYLNPDRGSDPEALAVHGLTTEFLSDKPRFGEVAAQFLAF
IDGAELIAHNAGFDVKFFNAELQKAGLKTLDNYCGSVVDSLAHARTLYPGKRNSLDALCDRYGISNAHRTLHGALLDSQL
LAEVWLAMTRGQDALLIDVDDAQGGGGSQVELSRFDASVLPVIAASAEDLAAHEAYLAALDKSVGAACLWRTLDEASGAP
AQAA
>AHV92940.1 rmuC family protein [Bordetella holmesii ATCC 51541]
MAAGAAGLAALLTLWLCLRPAASRAHLDGLYEAVERLERGLRADLAQTQSDNRREAAESLARFGTQFGERLQGLVEINDR
RMLEIRNTVDQRLQTLQADNAARLEDMRRTVDEKLHATLEQRLGESFRLVSERLEAVHKGLGEMQTLAAGVGDLKRVLTN
VKSRGTWGEVQLARLIEDSMTADQYARNIKPVPGSDAIVEFAIRLPGGEAGPVWLPIDAKFPKEEYERLQLAQDAADHEA
ARVAGAALVRAVEAQARLIAEKYVAPPHTTDFAIMFLPTEGLYAEVLRQPGLVDKLQALRVNVAGPTNLAALLNSLQMGF
RTLAIERRSSEVWQVLRAVKTEFGKFGESLASVKKSLDTASNKIGQTETRTRVMLRNLNAVEALPGEQAERLLGDETDTL
DPAAQR
>AHV92941.1 heavy-metal-associated domain protein [Bordetella holmesii ATCC 51541]
MSVAFIVPDMTCGHCVKTITQAVQNAVPGAQVQIDLPAHRVTVSPAEGADAAEAAIRQAGYDPKKQ
>AHV92942.1 UMP kinase [Bordetella holmesii ATCC 51541]
MSSRPYKRVLLKLSGEALMGEDAFGINRSTIVRMTDEIAEVAATGVELAIVIGGGNIFRGVAPGAQGMDRATADYMGMMA
TIMNALALQDALKHKGVDTRVQSALNIDQVVEPYIRPKALRYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLK
ATKVDGIYSADPNKDPTATRYARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRVVGGEDEGTLVHV
>AHV92943.1 hypothetical protein D560_3635 [Bordetella holmesii ATCC 51541]
MHIDLAAAPADSAARLQALLREALAREQYGRKARESVQRHMPWQAYEEAISTMLMQAATPEPANPARRAEPQLTGLRSR
>AHV92944.1 acetyl-CoA C-acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MSDPIVIVSVARTPMGGMMGSLSGLSAHELGAIAIKAAVERAGIKPDHVNEVIMGNVLQAGQGQAPARQAALGAGLPLGV
SCTTIHKVCGSGLKAAMFGHDLLLAGTADVVVAGGQESMSNAPYLLLKGRQGYRYGHSTVYDHMALDGLEDAYDRGKAMG
VFAEDCATKYSFSRQEQDEFALESLRRARAATEDGSFKWEITPVTVAGRKGDTEIDTDEAPTKAMPEKIPTLKPAFKKDG
TVTAANSSSISDGAAAMVLMRASTAQKLDVKPLARIVAHTQHSQEPQWFTTAPVGALKNLFAKTGWKASDVDLYEINEAF
AVVTMAAMKDFDLPHDKVNVHGGATALGHPIGASGARLMATLIGALRQKGGKKGVATLCIGGGEAVAMAIEML
>AHV92945.1 DNA ligase D [Bordetella holmesii ATCC 51541]
MDPQVKRLAVKVEDHPLDYADFFGDIPAGQYGAGHVDIWDRGHWSMQGNPAQALQRGHLHFRLQGRRLQGDWALIRTRDE
QWLLRKVQDVPPKPAARTLPGKAASMPRQLKPPLATLADQPPVGEDWRYEVKYDGYRMLCELRDGNVRFISRNGLDWTAR
MQPLATTIRALKLGQGWLDGEVVVFNEQGIADFQLLQKALDGDASCLRYVVFDLPYWEGRDLRGIPLSQRQHWLSVLLER
APSPLRLTQRLDIADAAQAAHAWLQACQLQLEGLIALVQWGVIELHTWNSRAPKTETPDRLILDLDPGDGVDWPTIVEAA
QLVRGLMQEVGLVPFLKSTGGKGLHLVAPLKPVAGWQEVKALAHGLADRLESVLPDRFVANMAKAKRGGRIFVDYLRNGK
AATAVAAFSVRGRPGGPVAMPLPWDVLDPARDLRTNCFNVRNALEWIETHPHPWADYAASRRQVGPRMLARLGLRV
>AHV92946.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSALLRVQHLSVEFPNRRGVLKALDDVSFSIAAGEVLGVVGESGAGKSLTGAAIIGLLEPPGRISAGEILLEGRRIDNLP
DEQMRRVRGREIGAVFQDPLTSLNPLYTVGRQLVETIVTHLPLTARQARERAVELLAATGIPAARERIDHYPHQFSGGMR
QRVVIALALAAEPKLVVADEPTTALDVSIQAQIIELLKKLCREQGTAVMLITHDMGVIAETADRVAVMYAGRLAEIGPVA
DVIHRPQHPYTAGLMGSIPKLHGGAGRLVQIDGSMPRLNAIPPGCAFNPRCARRVERCGRDRPELVAAGASRAACWLLEQ
EGRA
>AHV92947.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MTLAIRRRLLLGSAAFCTFFAVAAGAAPTDYPDKPLRLVVPYPPGAATDGISRAFAQELGKILGQSVVVENRPGAGSAIG
IQAVKSRPADGYTLLVHAEGFYSAKIMTPGAGYEFSDFEILAPLGQNSYAFIVPADRGWTQLSDLKGLTRELDIGTADLG
VGTYSTLAARAASATSPA
>AHV92948.1 fructose-1-6-bisphosphatase family protein [Bordetella holmesii ATCC 51541]
MKRKTLTQYLVEQQRSAEALAPEVRLLIEVVARACKAISHAVSKGALGGVLGSLDSENVQGEVQKKLDVLSNEILLEANE
WGGHLAAMASEEMETIHRIPNRYPKGEYLLLFDPLDGSSNIDVNVSIGTIFSVLRAPHHVSGADVSEADFLQPGRDQVAA
GYAVYGPQTMLVLTIGRGVVGFTLDREMGSWVLTHESMSIPANTKEFAINMSNMRHWAAPVKRYIDECLAGKTGPRGKDF
NMRWIASMVADVHRILTRGGIFMYPWDAREPGKAGKLRLMYEANPMSFIVEQAGGASINGTQRILDIQPDQLHQRVSVVL
GSKNEVELVGKYHTETDAK
>AHV92949.1 RNA polymerase sigma factor for flagellar operon [Bordetella holmesii ATCC 51541]
MPNAEESLLRYSPLVRKLALQLLARLPASVQLDDLMQAGTIGLLDAVRRYQETPDAQFETYATACIRGAMLDELRSQDWL
PRSVRSKSRRIESAIQRQEQRLMRPPTETEIAEELGVPLDEYQSMLSDAQGIQILHYENIDADGESGAGHWQPACVQSSG
NPLNALLASDLRASLIQAIERLPEREQLLLSLYYEQGLNLKEIGAVLNVTEARVCQLRSQATARLRATLQELAWAKLPEP
QLLSHVI
>AHV92950.1 calcineurin-like phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MRIQLLSDLHLETNPEFEFSPAPNADILVLAGDIGSYQAGSRLPDADFGLGRFAHAPGRAPHIIFVPGNHEFDGLGYRAA
TERLQAICSRLGIHWLERESLVLDGVRFLGTTLWTDFEALAAGQKTEILRRQQLEKAYRAANFYLRKNTTLHDDGQPMLA
EDIRALGLECQQWLRARLAQPFDGATVVITHFAPSLRSADPRYGVTPGTAGFCNAMDDLFCQADVWIHGHLHCRNDYTVQ
DAASGRRCHVIANTLGYARKGEQASFDPHCIIELPAR
>AHV92951.1 integral membrane protein MviN [Bordetella holmesii ATCC 51541]
MALFRSAATVSSFTLLSRITGLVRDILIARAFGAGALTDAFWVAFRIPNLLRRLFAEGAFAQAFVPILGTARSHHGEEGV
RVLLDRVALVLTLTLMTVTAIGIVAAPWIVTAMASGLRDSARDTEFGAAVWMTRVMFPYILCMSLVAFASGVLNTWRRFA
VPAFTPVLLNLSMIVATIWLAPRLEVPIYALSVGVMAGGVAQLVIQWAALAHLGLTPRLTLRVRQAWTDPTVKHILRQMA
PATLGVSVAQISLLINTNIATWLTPGSVTWLSFADRLMEFPTALLGVALGTVLLPTLSAANARQDHAGYSALLDWGLRMV
LLLGLPAALGMMLLADGLVATLFHYGAFQTGDVQQTRLAVIAYSVGLIGLLSVKILAPGFYAKQDIRTPVKIAILVLVMT
QLMNLIFVPLMAHAGLALAIGLGACLNALLLLAGLRRRGVYQPGGKWLRFVLRMVPALLALAALLLWVDQRIDWIALQHC
PWLRAAWLAGVLAASGVVYFGVLFALGMRPRDFNRRSAS
>AHV92952.1 putative exported domain protein [Bordetella holmesii ATCC 51541]
MTKLRAVLRHLLIWWLPGLAILAAVVASFVFWLVASQTGSRVLLNAAVQMAGGEVQHIEGSVLKGLRVGRLDVTVADTRI
EASNLWLDIDWSELGHRRAYVRALTADRLAVGLPPTAPQSSTQAASGGMPDALSLPVSIDVDRLAVGEFALTRAGQPLPV
SLHDIALALHVQREAAARLDIQSLRVDHPEGRVRLTGLLDVQKLAAPWPLAARLEARIAAARPDATFCMEIGDLKASQKT
QDDAARAAQQGAYLVTRPEVVQGAASALGARSSMRSRPTCGASAGGRRCGSFARSRCRYRQKVRWNNWR
>AHV92953.1 amidase, hydantoinase/carbamoylase family protein [Bordetella holmesii ATCC 51541]
MMMGSGVFAGKFSLETALSARDAGGTSVAQELRAIGYAGDDPVGGRPVGAYFEAHIEQGPILEHESKTVGVVTGSLGVRW
YDVTITGMEMHAGPTPMAIRKDALYAASFLVQAVVELARANAPHGRGTVGEIHAHPGSRNVIPGQVRMTVDLRHQDEATL
ANMDRQWLARAAQVAREHAVEIDVRQVQYFPPTPFDPELVGWIREAAQQRDLPAMDIVTGAGHDAVYMASVTPTAMIFVP
CKDGISHNEIEDAKPADLEAGANVLLDAMLARANTQP
>AHV92954.1 sodium Bile acid symporter family protein [Bordetella holmesii ATCC 51541]
MISRERLEAKQVPIYFGAVVLALLAAWALPGTSRLSGAIDPIVALMLFATFLQVPMVELRHALRDLRFLGVLGLANFVAV
PLLVAGLVPWMPADPLIRSAMLMVLLAPCIDYVVTFAHLGRADARALLAATPLLLGAQMVLLPVYLSVFIGAQAAPLLPW
EPFLSAFFRLIVAPLVLAALCQAWMARAGSHPKVRRALGVLPVPATAVALAVVVAAISPGVGLDVIRAAAPVYLAFAVLA
PALGWMVAYHLPRPQRRAVAFSAATRNSLVVLPIGLAIPGAQPLVPAFILTQTLVELAAELVYVRVAAGRQRA
>AHV92955.1 phosphopantetheine attachment site family protein [Bordetella holmesii ATCC 51541]
MHKPNLEEFIESFLTACDFVQEVRVTGDTRFDEMPDFDSLAMLGVIIMMEGEYGRPITADKVFSLGNISALHAYAQGEQ
>AHV92956.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MGHVLRPAAIELEGASFGWRGQPAVREVSGRFAAGCMTAIVGPNGAGKSTLVKGLAGVLAPMTGQVRRDPASVAWLPQAA
ELDRDFPISVLDAVVLGGWRRTGAWRAVSGDETARAHLALRRVGLEQLAARPLQALSGGQLQRVLFARLLMQDAPILVLD
EPFAAVDGQTTRVIMALLCALNAEGRSVIAVLHDMALVKEYFTQTLLLSGRVLDWGPTATVLAPERLAHGQLHLGYT
>AHV92957.1 tRNA dimethylallyltransferase [Bordetella holmesii ATCC 51541]
MSMTSPPLICLAGPTAAGKSAATLALAQRWPLEIINVDSATIYRGMDIGTAKPSLAEQAQVPQHLLDIRDPAQAYSAAEF
RADALRLIADIRQRGRIPLLAGGTMLYYKALREGLDDLPQADPTLRAQLEAQAAAQGWPALHAELALRDPVTAARLSPND
SQRIQRALEICLLSGQPMSSLLTGAARQPAGDHQFLTISLEPADRAGLHARIEQRFDAMLGDGLVDEVRTLHARADLNPG
LPSVRCVGYRQIWAYLDGELALDDAREQGVAATRQLAKRQLTWLRAQPERRVINCLAPGTAARVVDLAAPYLDAAIHT
>AHV92958.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MLRDALRERVRGGGLALCLFDINNFKTINDRHGHFAGDYLLRRVALAARRCMRRTSDDLCRVGGDEFAAALSAPSASAAL
AQAQRVLDAIRAIAPLDTPHGPRHVTATFGLAWIAPGVSLTWEQAYSDADRALYRAKQAGKNRLHLIASRTAGA
>AHV92959.1 hypothetical protein D560_1909 [Bordetella holmesii ATCC 51541]
MSNAIIRLQDVNKWYGQFHVLRNINLDVASGERIVICGPSGSGKSTMIRCINRLEEHQQGKIIVDGTELTNDLKQIETIR
KDVGMVFQHFNLFPHLTVLENLTLGPVWVLKKSRAEAEATAMQYLERVRIPDQAHKFPGQLSGGQQQRVAIARSLCMSPK
IMLFDEPTSALDPEMVKEVLDVMVSLAQESGMTMLCVTHEMGFARKVANRVIFMDRGEIIEENTPDEFFDHPKNERTQLF
LSQILH
>AHV92960.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MDPHPPLNLHHLHVFNAVAVAAAGDTVRVRTARIQDELESVMDEARQRGARAGTSAALYHTGRLASVVLLADVHHMSTVA
HQQGLTQPAISAAVSRLEQCLGQAIFQRTPRGMIPTQAGERWVRNFKRVLAELRNIEADVAALNGAIEGTVTVGSLPLIR
TLVLPSAIAAVLARHPGLRIRTLESPYGDLCAGLLSADVDFILGALRPLHDKSLSTRVLMHEDIVLLARAGHPLARRRTI
DFDDLRSYPWVLSRASSPLRYQLNDFFRAKGQPLLEPSVETADLATLRGLLLHSDMLTALSRHQMHYEVASGGLQALNFS
LDGMQRDIGVTVRAGAQLSPGANALLQEVQAQARQITTA
>AHV92961.1 hypothetical protein D560_3062 [Bordetella holmesii ATCC 51541]
MSIMMPGTIRRLHDSPCMPDGPRTDELMRFDIKPGRNDGALRQA
>AHV92962.1 UDP-N-acetylenolpyruvoylglucosamine reductase [Bordetella holmesii ATCC 51541]
MSISLVPTNQDLRDLNTFRLASRAAAFVTLDDEAQLPAVSAWLARYPGCLVLGGGSNVVLGEVLSDLVVKVGLRGIRLLQ
TRDDAWLVEAAAGERWHDFVAHCTEQGWAGLENLALIPGTVGAAPVQNIGAYGVELADRFDSLDAWDLQQGRAVRFEARD
CRFAYRDSVFKQQPGRWLITRVRFALPRPWRAVLNYPDLQRWPALQQAEVDARTIFQAVCAIRQAKLPDPAVIGNAGSFF
KNPLVDATVRESLLARYPELVSYAQPDGRYKLAAGWLIDQCGWKGRDLGPAGVHDRQALVLVNRGAATARDILALADAIR
TDVQGRFGVWLEPEPVVVA
>AHV92963.1 ribosomal protein S15 [Bordetella holmesii ATCC 51541]
MSVADIKKSEIVAQFQRAQGDTGSPEVQVALLTARINELTGHFKEHAKDHHSRRGLLRMVSRRRKLLDYLKGRNPDSYRA
LIEKLGLRK
>AHV92964.1 tryptophan 2,3-dioxygenase [Bordetella holmesii ATCC 51541]
MSNPEDIVRTENAQLDFRTDMTYGDYLCLDALLSAQHPLSPEHNEMLFIIQHQSSELWMKLMLHELRAALGQIRSDNLPP
AFKMLARVSKIMEQLVHAWDVLATMTPPEYSALRPCLARSSGFQSYQYREIEFMLGNKNAAMLRPHAHRPELLAQVQAAY
EAPSLYDESLRLLARHGLPVPQDYLQRDWTQPYQASPEVEAAWLTVYRNPQHYWNLYQLGEKLTDLEDAFRLWRFRHVTT
VERVIGFKKGTGGTSGVGYLRKMLDVVLFPEIWTLRTDL
>AHV92965.1 mce related family protein [Bordetella holmesii ATCC 51541]
MAEPTDKPDTPLGKVKVTKKQRSRVSWIWLVPLVAALAGLSLVVRTWMQSGPDITIEFNTAEGLEVGKTQVRYKDVTIGT
VKGIHFNEDRSKVVVEAELAKEVQNMAREGTNFWVVRPRLGISGVSGLGTLLSGAYIGLDASGDPQELERKPSKFHFVGL
ETPPPVEHDRPGKRFTLRASDLGSLDIGSPVYYRRISVGQVIAYSLTDDGRAVDVEVFVDAPNDRYVTEGARFWNASGVD
FSVNAEGLKVRTQSLVSVAVGGVAFDNVVSGEDEEAKADTQFQLYGSEANAKANTDGTPYRICMRFDQSVRGLSVGAPVD
FQGIVLGEVTSVAIDFDGSKKRFYGVVDATIYPERLGSLFDEIVQSVQRDTGSKDLAPGRTLAVLVKYGLRAQLRSANLL
TGQMYVVLDNFPSAKPVNYEFTEPANIPTIPGQFDQLQEQIGSIVAKIEKIPFDQIGQELRVTLSNTSKPMTRLDKDMAP
GAAAMMKEARRSMEQINELLSSDSPLQLNADRSMQELSRAARALRNLADYLQANPQSLLRGRGADPIPGSGSVRN
>AHV92966.1 ATPase FliI/YscN family protein [Bordetella holmesii ATCC 51541]
MTRAPIDSVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGAEGL
ARSVVVAAPADVSPLLRLQGAAYATRLAEHFRDQGQDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALV
ERTGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRSLAEAGHYPAIDIEASISRAMTSLISQQQF
NMVRRFKQVLSRYQRNRDLISVGAYVPGADPQLDDAIARYPRLEAYLQQNVGDNVSYADAVEILRATFASGDTHA
>AHV92967.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV92968.1 flagellar hook-associated family protein [Bordetella holmesii ATCC 51541]
MEALQKAASDLSGMTGSNILTNKVTGDGVTSSIGTGATAGTYNIKVSKLATAQSLQTQAYSSRVESMGTGGTMTFTIDGT
EKSVTLGSDTSLNGIVKAINGEDSLGLSATVVNDGNDNYYLMVSSNTQGTKAAVSKIAVTGNDTLAATFKYDATDSSSPM
TVLAAANDAQLTINGISIVSQTNTVTTAIDGITLNLTAVTAADGNGATLTISQDSSKITTLVQSFINAYNSLQTTISDLT
AFNVDDETQSALTGDGTARNIQSAVAAALQVATGEGNVQNLGQLGISINSSTGQLSLDSEKFNKALSQNPNDVLWVFAGT
NGVASKMAAATDKMLGTNGSIKTRTDGLSKTLENLQKQYDSTESQIEATMANYRTQFVKLDALVVQLKSTSEYLTQQFAA
LTSSSD
>AHV92969.1 outer membrane protein oprM [Bordetella holmesii ATCC 51541]
MTRRLLSLAISAILLSGCISLAPDYERPALPVAASFPQPSGSLTISAPAAAVDWQSFYTDPQLRGLITQALNNNRDLRLA
VLRVEEARAAYGIERAGLFPTLGVTADGTRQRTPGDLNLTGRSVTGSQYQVGLGMAAWELDFWGRVRNLKDAALEQYLAT
DAAQRAATLSLISEVADGYLTLRELDERLALTRTTIATRAESLRIFRRRFEVGSISKLDLTQVETLWQQATALGAELERT
RAAQLQALQELVGEPITLAEAPDALTHEALMQELPAGLPSDLLTNRPDIVAAEHQLKAANANIGAARAAFFPQISLTGAF
GSASSQLHGLFGSASSAWSFSPNLNLPIFDAGRRQSNLELAHARQQQAIAQYEKTIQTVFREVADALSARYWLAEQVQIL
QATVQAQGERARLARLRYDHGASPFLEVLDAQRDLLDAQQQWASTQRALLSSQVALYAALGGGTHAQVTAPVPTDHP
>AHV92970.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MAPLLVLGFASGLPLALTSGTLQAWATVEGVSLQEIGFLTLVGSAYTLKFLWAPLIDRYAPPFLGRRRSWMVVTQLLLAV
TIMGMGLLSPGESLLPLALLAVLVAFLSASQDIAFDAYSTDVLHKNERGAGAAVKVLGYRLAMLCSGGLALVLADHWLGW
GTTYVLMGFLMLAGVAGTFWAPEPERPTAAPRSLGRAVVEPFREFFSRRGALTLLALIVLYKLGDAFAGALSTTFLLRGV
GFTPTEVGTVNKVLGLAATIVGALAGGAIMGRWGLYRSLMAFGLLQAVSNLGYWVIAVAPKSLTLMAAAVGIENLCGGLG
TAAFVALLMAMCNQAFSATQFALLSALSAVGRTYLAGPLTPVLVAYMGWPGFFMVTVFIALPGLVLLWLRKGDIEALERD
GAKA
>AHV92971.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MSAEDWNSLPRSADTPALVLFHGLEGGSNSRYAQSIAHHFRARGWIVAIAHFRGCSGVPNRLARAYYSGDSEEVGFMLDT
VRQRIPQARWHAVGVSLGGNALLKYLGEHPDSTQWLAGAAGVSVPLDLMASGKALCQGFFARRIYTPYFLRTMKHKVLEK
AKRFPGAIDVMRIANARDLRDFDDAYTAPMHGFRNALDYWARASSKPWLAKIGIPTLVLNARNDPFLPESALPVPAECAD
QVLLHQPAAGGHAGFPAGPFPAHLNWLPQRLGRFFETGK
>AHV92972.1 outer membrane protein oprM [Bordetella holmesii ATCC 51541]
MTALMYKRGVVVLLAAGLAGCSLAPDYHRPEAPVRANWPDQPKVSYGGYERPTQLGSQPAVAVAPPAGTSAADIGWRSFF
QDPCLQALIELALTNNRDLRVAVQNVEVARAQYGVQRGAQWPAIGAGAQGTRQHLPKNMRAAGPNSSSISSQYQAGLGLT
SFEIDLFGRLRNLSEAAYQQYLSTEQAQRSVHITLIGAVAEAYFNLRAAEVQLDLTRRTLQSRQESYNLVKTRFDGGVSS
ELDLNQSRSLLDSASSNLAQLARTHAQAANALMVLLGVPSLPADLPPAAEFGRDQILATVPAGLPSDMLERRPDILAAEN
QLRAAKANIGAARAAFFPTISLTGLLGVASPSLDTLFKGGQGYWSFSPQITTPLFAGGSIIEGLNLAKARDNIAVAQYEQ
TIQQAFREVADALAGEATYSAQLDAQRGLQASSARSLELSNMRYTSGIDSYLQVQTAQVDLFDAQLALVQTGLASLINRV
ELYKALGGGWLENTAMPETQPRTSQQQ
>AHV92973.1 hypothetical protein D560_1017 [Bordetella holmesii ATCC 51541]
MSKSITDKVIRNSSGNLPFSEILERNLSRRAVMRGSLAALATMGSLSLAACGGSHDDDDDEAATPETGPGTTPTTPPQAL
KLGFDSLPASMTDACVVPAGYVAHVIGAWGTPLNDNAQAWDKNGNNSSNDLLNSTGMHHDGMHYFPLEGSATEGLLVVNH
EYIDQGALHPNGATRVAGKRPAEEVRKEVNAHGVAVMHIRKDNGRWQIVNNSRFNRRFTSATAMKLAGPVAGTDWVKTPF
SPNGSQVRGDLPPDLVRHRHRAQG
>AHV92974.1 hypothetical protein D560_2726 [Bordetella holmesii ATCC 51541]
MGEAVGDADVTPAGVASCDAGVLPASHPSPTAVARTIAPATPSQTFLLFVKAHL
>AHV92975.1 prolipoprotein diacylglyceryl transferase [Bordetella holmesii ATCC 51541]
MLQAPQFDPVALRLGPLAIHWYGLMYLLAFALVYLLGRYRINRGQGGNLTAKDLEDLIFYSVLGVVLGGRLGYVLFYKPG
YYLSHPLEIAFLWEGGMSFHGGLIGVILVMLLFARKKGVSFFTISDFIAPLIPLGLGAGRMGNFINGELWGRPSTVSWAM
VFPQSGDSLPRHPSQLYELGLEGLVLFVILWWFSSKPRPTGQVSALFLMGYGAFRFLVEFTREPDNFLGLLAGGMSMGQW
LSLPMFLAGLAVFVFTAKRSSRQP
>AHV92976.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MDISNAIEVIGLSKRVTDATGELTILDGLDFTVRSGDAVAITGNSGSGKSTLLGLLAGLDVPSEGQIRLAGQDLFALDED
GRAGLRARYVGFVFQSFQLLPNLTALENVMLPLELAGRPGGASRKAAESMLQRVGLSARLHHYPRTLSGGEQQRVSLARA
FVVHPALLFADEPTGSLDAATGQTVIDLMFELQREQGATLLLVTHDAGLAARCDRQLVLSGGRLQA
>AHV92977.1 fecR family protein [Bordetella holmesii ATCC 51541]
MIHTRRYTTSRGELREVMLDDGSTLTLDAGTSIWVALYQGRREVTVQHGQVMFAVSPDAGRPFDVLAGALRVTVVGTRFA
VRQTETGLDAGRTVVAVESGRVRVEPLQRGFAGEATFLGAGERVSADAQGRLDEVVQVGAQSVAVWRQGRVSFNDTPLSQ
ALAEFERYGPTGLALGDPAVGQLRLGGTFDLHAAQRFAQALPHLLPVRVQKTAHGIVIGSKR
>AHV92978.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bordetella holmesii ATCC 51541]
MDKLRITGGARLEGEIAISGAKNSALPILCASLLTAEPLHLANVPELNDTRTMLRLLGQMGVKTASSGTEVTLQADQVDS
LEAPYELVKTMRASILVLGPLLARFGQARVSLPGGCTIGQRPVDQHIKGLEALGADITMEHGFVVARAKRLKGASVRTDM
VTVTGTENLLMAAVLADGQTILENAAREPEVVDLAELLIKMGARIQGHGTDRIVIDGVQRLHGATHTVISDRIEAGTFLC
AVGATGGDIMLRNTDAAIMGATLDKLGEAGLNITTGPDWIRASMDSRPRAVGVRTHEYPGLATDMQAQIMALNAVAEGTA
IVVENIFENRFMHVQELCRLGADIDIDGHTAVVRGVSQLSGAKVMATDLRASASLVIAGLAADGVTQIDRIYHLDRGYDR
MEVKLRNLGARIERVSGKEEE
>AHV92979.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MQFDTLYMRHISLMVSWKRSLLLTAYANDNKPDSQFAKGECGVLTAGSSAFGALNNTRGLSFGVAPLPYYDQVTQTPGRP
FVSGSALWTLEGNPASQEKATAQFLAWLSKPVVAAEWHQRTGYLPLTEAAFRASDVSFYNKIPGAQQLVASLRAQQVAPQ
ARGFRIANYDRIENVLNTQLTDALDGKTPPVSALNNAVDQARNLAAQR
>AHV92980.1 putative exported protein [Bordetella holmesii ATCC 51541]
MSRPRGFGGDLQTLTILAADGSMTYETQLKVGKRIRPALRESGCWTVANGIYTLQTTKSNGEPVDADDPIYQTRYQVQSV
DQTRLMLRELKNGGQQLTARRMPAGYRLPN
>AHV92981.1 prolyl aminopeptidase [Bordetella holmesii ATCC 51541]
MLYPAIEPYRHGMLDTGDGHQVYWELCGNPQGKPAVFLHGGPGSGCSPVHRQLFDPQRYNVLLFDQRGCGRSTPHASLQN
NTTWDLVADMERLRREVMGAERWLVFGGSWGSTLALAYAETHPEHVSELIVRGIFTLRRAELLWFYQEGASWLFPDRWEG
YLEPIPQAERGDMIAAYRKRLTGDDAVEQLRAAKAWSQWEDHTITLMPSPRHQQSHAADRAALAFARIENHYFVHAGFME
EGQLLRDAHRLHDIPGTIVQGRYDVCTPARTAWDLHRAWPQADFHLVPDAGHAFDEPGILARLIEATNRYASTKD
>AHV92982.1 ribosomal protein S12 [Bordetella holmesii ATCC 51541]
MRKPREVSIIKSKSPALENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGYEVISYIGGEGHNLQEHSVVLVRGGRV
KDLPGVRYHIVRGSLDLQGVKDRKQARSKYGAKRPKKA
>AHV92983.1 exopolyphosphatase domain protein [Bordetella holmesii ATCC 51541]
MRQFMKRYHIDVNQARRVRQTALSLFDELMPDGAERAELRNAIGWTADLHEVGLSIAHNAYHKHSAYVLENADMPGFSRA
DQQLLALLALASQGKLTKAEPLVRSRGQWIAILCLRMAVLLLRRREDTPLPFKLRIQGTHIQVEIARDWLDSHPLTDFTL
QGEVSEWRKVGFAFELLER
>AHV92984.1 adenylosuccinate synthase [Bordetella holmesii ATCC 51541]
MVIGTQWGDEGKGKIVDWLAESVQGVVRFQGGHNAGHTLWINGKKTILCLIPSGIMHPGVTCYIGNGVVLSPEALLKEIE
ELEAAGLDVRSRLQISEICPLILPYHVAIDKAREARKGDGKIGTTGRGIGPAYEDKVARRALRVQDLFTPDIFDAKLAEV
LDYHNFVLTKYLGAEAVSANEVRDQAMALAPAIQPMVRDVSSSLYLAQEQGANFLFEGAQGALLDVDHGTYPYVTSSNCL
AGAASAGAGVGPQALNYVLGITKAYTTRVGSGPFPTELLDEIGTRLATVGKEFGSVTGRPRRCGWFDGAALKRSVRLNGI
SGLCITKLDVLDGLETLQLGVGYRVNGEFRDVLPYGAHAVAQAEPVLEELPGWSESTVGITEYSKLPANARRYLERVAEV
CGVPIDLVSTGPDRNETIVLRHPLKG
>AHV92985.1 hypothetical protein D560_2989 [Bordetella holmesii ATCC 51541]
MLHQPGEGEHGARRERLADEVQSLLDEGVTQLRGLDDWLIDRERCGDAGVLFEDCSRIVSARLLVTGKRVALPAFSVVPE
LSLFSSRYIVLAWLLCLLDTLPEGQTLDVQGPSAHVWTATPGTLSAPAPWPGQPEPITREDLEVLAAASGWQTNCSDHLW
TLSCPALPRL
>AHV92986.1 putative pilus assembly protein [Bordetella holmesii ATCC 51541]
MLKRPSYHRRPCVPRPSRSRKLRLIKPSDKQQLLLIDADMPQPELGCAATRSWPRRSCRSWQQRYRQRGQALPEMLVVAG
AMALLWIGVQELSSMRMAVLEAAQSSRHWAFALARAHTPPAKDEGMHLAVLEVAQAHDSAISADARTLARDWLDLPGRWA
AVRAWAGQGNPERYTVVSAGAGHSSGATSTQQRLQRSTLGWRGSAAVSLRQASRLDKALAGLDHPWGQRRISTDWLSPWA
DVTVAGTRALGKH
>AHV92987.1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [Bordetella holmesii ATCC 51541]
MSSRAYVGLGANLGDGAATLRQALTELAALPGVQDCRSSPLYRSAPVDATGPDFINAVAALQTTLTPLGLLDALQAIEQR
HDRQRPYRNAPRTLDLDLLMYDDLELQTTRLILPHPRLHERAFVLYPLRDLAPDLRLPQGSYADLLHGLQDQGIARL
>AHV92988.1 ZIP Zinc transporter family protein [Bordetella holmesii ATCC 51541]
MLLLWIILATITGGLIAVAIAHWLAYRVFAQYLHHMVSLSVGVLLSVALLHLLPEAFEQAGVGAHTLFGLMLASLIGFFV
LEKIALLRHSHHHEHDGHHHHKGHDRHEAGRGGVLILIGSSLHNLCDGVLVAAAFLTDPLLGVLTAASIIVHEVPHKLGD
FVVLINAGLQRQRAFGLILFTSLCTAIGGGVGYFVLQEAQNLVPYVLVVAASSFLYISVADLMPQMHERVTLSDAVPQLL
LVGVGVAIIYGVTSLMHHGHEHGHAHDHDHAAAVLEAGPHRH
>AHV92989.1 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 domain protein [Bordetella holmesii ATCC 51541]
MEGMATDRELFQADGIHPNEKAQPTLLNNVWPGLKPLLRGDQPSAG
>AHV92990.1 hypothetical protein D560_0740 [Bordetella holmesii ATCC 51541]
MTLYVVAAIGLLGLRYWVLPRADEWRPRIEQYASQALDARVTIDHLSADWTGLNPRLTLKGVRIQTRHRTDAVLNIPSVG
AVLSWRSMLRMSPSLLTLRVDGADIALQRDKQGQLWVAGQSFDLSQQSTHDDSPWLNWLGRLGELTLYDTTVRWLDESRQ
VPEIALTDLDLLVRNGRLSHRFSLRARASGELASGVTLRGEFNRGLFASDPNALSSWSGQIYAELRDAEPLAWRPWIDVP
DVQGRMSTRAWLQIDHGKLADFTMDAVTRGLSWQIGGPAKASAALAANRLRWRLQGMPGDVLEFDDLPLARSHNGAGMHL
KAHAEQASAYLPEWFEFPDIQASELDLDTTFVRPKDQPWRMELSQLRVANEDEELKLYGTWRAEGKTAAGTADLRGSMMR
AHMNAIHKYLPLEVNADARQWLAVGLPAGEIRDAAVTIQGDLADFPYAAPGVAGHFASRAISAMQRSTMRRLVQAARPGP
GWSNWAAVLRWTRPA
>AHV92991.1 maoC like domain protein [Bordetella holmesii ATCC 51541]
MQSAIEVGPQRYRASYGRYLEEFQPGDVYEHRPGRTITDNDNIQFSLMTMNAHPMHCDANYAAKSEFGRLLVNSGLSLAV
VLGMTVNDVSAKAVANLGWKEIKLTAPVFGGDTLYAESEVLEVRPSKSRPTQGIVTTRTRAFNQNGVMVMEFLRMSLVPK
RGHGVDDQI
>AHV92992.1 restriction endonuclease family protein [Bordetella holmesii ATCC 51541]
MKFKLSQDSIFAVLLRSPLWMSAGLALVLCLGGFAVLPKDLAAMGVFVAVPFAAIALVSAVRRRNTPSQARILAVAAMSW
AEFASTAEAGFQQDGCQVERLQHPGADFSLRKKDKEAVVSARRWKAASIGVEPLRQLQALREKRGAGEAIFIALGEVSDK
AWHYAQLQNISLMTAPELAKLLRHQKL
>AHV92993.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MGFLAGKRILVTGVLSNRSIAYGIARACHQQGAKLAFTYVGDRFKERVTEFAAEFGSDVVLPCDVAEDSQIEATFAGLKE
RWGGLDGLVHSIGFAPREAIAGTSSRGYRAKHSASPTTSRPTAFRPWPRQRCRSWKAARHRS
>AHV92994.1 polyketide cyclase / dehydrase and lipid transport family protein [Bordetella holmesii ATCC 51541]
MHKVQRSVLVPYSAAQMFDLVAAVEKYPEFMPWCGGTEVQSRSEHGMQASVLISFAGMKQRFTTRNTHDYPNRIDLELVD
GPFSSLVGHWVFQPLAEDACKVLFTLEYAFSNRALEMVVGPVFNRIATSFIESFTKRAQQVYGE
>AHV92995.1 glucose-1-phosphate thymidylyltransferase [Bordetella holmesii ATCC 51541]
MIKKGIVLAGGTGSRLYPATLGLSKQLLPVYDKPMIYYPLSVLMLAGIREILLITTESDLPAFQRLLGDGAAFGLNLSYA
TQAAPQGLAQAFLIGQHFIGQDPVCLILGDNIFYGHHFIPVLQAAAARTHGATVFGYQVRDPQRYGVVAFDAQQRAISIE
EKPLRPRSNHTVTGLYFYDNDVIDLARGLKPSARGELEITDINRLYLVRGDLRVELLGRGFAWLDTGTHEALMEAGHFVN
TIEQRQGLKIACLEEIAYHAGWIDAEQLTRQARRMGDNGYGQYLLRVLQESRS
>AHV92996.1 degT/DnrJ/EryC1/StrS aminotransferase family protein [Bordetella holmesii ATCC 51541]
MLVTARSFVASASAIVAVGARPVFADVDPDSQNVTAQTLEAARTPCTRAAVLVHLAGWMCEMDEILTWAGRHGIRTLEDC
AQAHGASYRGAPAGSLGDAAAWSFCQDKIISTGGEGGMVTTASQAVWQRVWSLKDHGKLPIQAASAGPGFKWLHEAFGSN
ARMTAMQAAIGRIQLRKCAAWVARRREHAQRLLDAAARYPALRVPRPPEHIGHAYYRCYVFVRPHALRPGWSRDGLLRAL
QAGGVRVFQGSCPEIYREVAFRRAGLAPRAPLPVARELGLCSVAFPVDPGLTEAEAGHRLQVLDSVMARASR
>AHV92997.1 maoC like domain protein [Bordetella holmesii ATCC 51541]
MLAFASKFDPQWFHVDETRAEQGRWGGLIASGWHTCALAMRMAVDAVLHDSESFGSPGLGEVRWRVPVRPGDTLTLHARV
LGARTSASREDLGIINWTWLVYNQHDEIVLELEATSLFDLSGQG
>AHV92998.1 histidine--tRNA ligase [Bordetella holmesii ATCC 51541]
MNDVLPDTSAQWERFEEIVRDWLQGYGYRNVRTPILEQTRLFTRGIGEVTDIVEKEMYTFTDALNGESLTMRPEMTAGVV
RAAIEHNLLYDRPQRVYSIGPVFRHERPQRGRYRQFHQIDVEALGFAGPDIDAELIVMLARLWKKLGLTDIRLELNSLGQ
PAERAAHRAALIEYLEKHADILDEDGKRRLYTNPLRVLDTKNPALQDMANGAPRLFDFLGEESRAHFDGVCQRLDEAGIA
FRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLIELLGGKAAAAVGFAIGMERLLDLWEQSAGVQVRAECEV
YIVHQGEQAQRLAAKVGEDLRDAGLSVVVHAGTGSFKSQFKRADASGARVAVILGDDEVATQTASVKYLRADAGGEGAQE
KVSLAMLAGVLESKG
>AHV92999.1 bacterial regulatory s, tetR family protein [Bordetella holmesii ATCC 51541]
MSTKPGERKTQILQMLAEMLEQPHAARITTAALAARLQVSEAALYRHFASKAQMFEGLIEFIETTLFTLINQIASAEPQA
LPQTRKTVSMLLAFAERNRGITRVLTGDALVTEDNRLQERINHINDRIEATLKQCLRNAVSEGSLPAQANVAAHASLLTH
LVMGRWLRYAQSGWRVAPTMHLEEHLRLALP
>AHV93000.1 dihydrolipoyl dehydrogenase [Bordetella holmesii ATCC 51541]
MSVACIDAWQNGDGGAAPGGTCTNVGCIPSKALLQSSENYEEVNHHFAEHGIEVKDVKLNLDTLIGRKNKVVKQNNDGIL
FLFKKNKVTFFHGKGAFAGQVEGGWAIKVSGTSEEDLVAKHVVVATGSSARELPGLPFDEKNVLSNDGALNLSAVPKKLG
VIGAGVIGLEMGSVWRRLGAEVTVLEAMPEFLAAADQQVAKEALKAFSKQGLDIQTGVKIGEIKATAKSITIPYVDAKGG
EQKLVVDKLIVSIGRVPYTGGLNAETVGLKLDERGFIAVDGDCKTNLPNVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQ
HGHVNFATVPWVIYTSPEIAWVGQTEQQLKAEGREYKAGSFPFMANGRARAMGDTTGFAKVIADAKTDEVLGVHIIGPMA
SELIAEAVTIMEFRGAAEDIARICHAHPTLSEAVKEAALAVDKRTLNF
>AHV93001.1 bacterial regulatory, Fis family protein [Bordetella holmesii ATCC 51541]
MTESNSPVGLLIDDDELYVKTLQRSLARRGLQTHVACNIAEALRVAEEVRPAFALVDLRLGEDSGLTLIRPLRALREDMR
ILLVTGYASVATAVEAIKRGADDYLPKPATAPMILRTLGLMKPETVTIEATMTPLHRLEWEHIQQALHETGGNVSAAARL
LGMHRRSLQRKLMKKPGPERDSMIE
>AHV93002.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MTQSRDYINDLVAPVAIRALDTHSTNTSESLAAYADLTWHATEALDLSAGLHWSHDKASIDYSGQSLNYSTFGQDPFGGQ
DTTRGNTALGRVSAGYRLDDAWRVYANASQGYKPGGFNLAPSSAADAQPYGREKAVSYELGARYQGESLRGGVALYRIDV
RDAQLYVSNQIGYQHLENVGRTRSSGVEFDAAWDVTEQWTVGLQGNWTRARFRALTPAASGACDDNRVPFSPAYMVAASA
QAAFSTSAGMLRPRVEVRRVGSQYFDVGNTLRQDAYTLMNASLSWQPRSSLTLTAYINNLTDKRYRTYAFAGGALGNFAL
VDPGRTVGVNVAYEY
>AHV93003.1 ribosomal protein L29 [Bordetella holmesii ATCC 51541]
MKASELRSKDAAELGKELESLLKAQFGLRMQKATQQLANTSQLRNVRRDIARVRTLLTEKAGK
>AHV93004.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MSSSLTGGAPVRAGVSATADAGARDALYRKLTLHLIPFLFLAFIVAYIDRVNISFAKLQMLSDLSLSETVYGAGAGMFFL
GYFIFEVPSNLILHRVGARMWIARIMVTWSIISCLTMFTQGATSFYVLRFLLGVAEAGFFPGIVLYLATWFPSSRRSQII
ALFMVAIPVFGAIGGPLSGWIMQSFGGVHDLAGWQ
>AHV93005.1 hypothetical protein D560_0139 [Bordetella holmesii ATCC 51541]
MGGRQALCGVAAAKARCCFRGYLSLPASCREKCAGQAQRHA
>AHV93006.1 molybdenum-pterin binding domain protein [Bordetella holmesii ATCC 51541]
MTLPIINARNQFRGKIKEIVLGSVVSEVDVETPAGIVTSVITTRSIKELDLQVGTEVLAFVKATEVSVAKL
>AHV93007.1 tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain protein [Bordetella holmesii ATCC 51541]
MTARIIDGVALSQRIREEVAQRVAALSAKGVRPGLAVVLVGEDPASHVYVRNKVAACEKAGLHSVKEQYPADLSEADLLA
RIDALNRDPAIHGILVQLPLPAHLDAHKVIEAIAPEKDVDGFHISNAGLLMTGQPLIRPCTPYGVMKMLEAEGVNLRGAE
AVVVGASNIVGKPMAMLLLAAGATVTLCNSKTRDLGAQTRRADVLVVATGRARMITGDMVKPGVVVIDVGINRGSDGKLC
GDVDFASASQVAAAITPVPGGVGPMTIAMLLVNTVEAAERTLAA
>AHV93008.1 HAD hydrolase, IA, variant 3 family protein [Bordetella holmesii ATCC 51541]
MLARRQLTRPAARMRRSRREQAGDGLLWLFDLDNTLHDTSHAIFPKIDAGMTRAVSEMLDVDVDAANEYRTRYWKRYGAT
VIGMVRHHGADPHRFLHRSHDFDVKPLVRAEKGLANKLKRLPGRKVLLTNAPLHYARAVLRHLGILQQFDALWGIDQMRL
HGEFRPKPSAALLRYVLAHEGVPARRAVLVEDTLDNLRGARRAGLRTVHVYHPGTPFARAHRHRPGYVDLRVNCVTDLLL
RRRPLRG
>AHV93009.1 glutaredoxin 3 [Bordetella holmesii ATCC 51541]
MYSKDYCPYCARAEALLRQRGVAEIEKIQIDHEPAQRDVMIERTGRRTVPQIFIGDTHVGGCDDLQALDRSGGLLPLLNG
>AHV93010.1 histone deacetylase domain protein [Bordetella holmesii ATCC 51541]
METMYLTHPSCKLHEMGSWHPESPQRLDAISDQLLASGLMPYLGEKQAPAATREDILRVHSAYHLDRLRGLSPEHGYVEI
DPDTLMNPHTLEAAYHAAGAGIAAVDAVMAGEATTAFCAVRPPGHHAEHSRALGFCFFNNVAIAAQHAMHRHGLTRIAIV
DFDVHHGNGTEEAFAGDERVLMCSFFQHPFFPNRGFDHPADNMLNVPVQAYSTGMAVRDIVRQQWLPRLQAHAPQLLLIS
AGFDAHREDDMAQMGLVEADYAWITDQLVAVADQHAQGRIVSTLEGGYNLSALGRSVVAHIRSLSKL
>AHV93011.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV93012.1 response regulator [Bordetella holmesii ATCC 51541]
MKQLSALIMVPDSASRARSITVLLQAGISTKGCSTPLELFGLLNEEHYDLVVLDVGELGELGFALIARLRGAADLGIVVK
GDAMPVEVRLRCLQSGADAALCAPLDDRELACVLLALARRLPAWQDHLDVEAPTALPASGKWELRDQDWTLAAPSGATLS
LSANERLLVRTLLKAEGKAVSRGTLSADLGADGGGRQSDVGRSQHRRRNKPAAAQSGTGGPYPAYPDGLRQRLLVCASLT
EDPRIDGQRRRFAHFLRTAFDSTG
>AHV93013.1 surA N-terminal domain protein [Bordetella holmesii ATCC 51541]
MHSSRRFRGSLLALALGLAMPLAHAADKAGAAKPAPTKAPAASSEQFVDGIAAIVNKDVITMREVQEATTRAKVDLKRRG
IQLPDDRTLQKQVLQRLIFERLERQEADRLGIRVDDNQVNQAINMVATRNKITQQQLRAEVEKSGVSWDEYRKSLRDEIR
ADRLRQRTIDNHIVITDAEVDAYLKDQARNPALQREAAAPAAAPAPQQAQPQAAGPEQIALAQILVRVPEGSSPETVASL
RKKAEEVLARLKRGDDFASVAAAASDGPEALQGGVMGARTLDGWPDLFVKAVQGVPAGQVSGIVQSGNGFHILKVLQRAD
GRAPARAQQRPAPPRPGRTGARPACLARPGACDADAYPPHSDQDLDCHER
>AHV93014.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIP
LRGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV93015.1 putative arginine-tRNA-transferase [Bordetella holmesii ATCC 51541]
MQQGFRRSGLFTYRPHCDNCRACTPVRVNTDLYAPNRSQRRAWKAHQDLRAFVAELAWSPEHYDLYTRYQQGRHPGGGMD
DDSRSQYAQFLLTSRVNTRLVEFRRPDGALAMISIIDVLENGLSSVYTFYDPDAAGSLGTYSILWQIEQCRKLELPWLYL
GYWIKDSQKMAYKASFQPQELHIDGQWRAP
>AHV93016.1 sodium/hydrogen exchanger family protein [Bordetella holmesii ATCC 51541]
MDIGFLVFGLAGLLTLICFMPPLAGRLGLPFSVLLAIVGCLLGIGIHLHGWAPPVLGDLLDTIERFEISSETFLMVFLPV
LLFETALSMNVRRLMNDIGPILMMAIVAVVVCTLVVGVAVNAVSSYGLLVCLLLGAIVATTDPAAVVGIFREVGAPKRLT
TLVEGESLFNDAASIALYSVLLAALGGSGEISASAVFNDFIVHFLGGGLAGWLMGRLVCSLFAWLRGYPTAEITLTLTLA
YLSFFISEHYLNVSGVVATVVAGLVVGSTGRTRMSPTTFEYLSNFWGQFGFWANSLIFVFAAMLIPKLMAAADWQELLLV
VVVFVATLVARAIVVFGLLPLLQIFKIGAEVSNPYKSVMLWGGLRGAVSLALALAVTEQTTVPEEARQFVAVATTGFVLA
TLFINGISLRPLIRMLGLNQLSPVERAIRNQALSVALETLQGKTDEIAKDDHIAPEARDRIHAVFDASLTAVHDTQVARM
SVEQRTAVGLAIVARHEEEMFFDILKAQIVDWRMAESLLARAERLEDAVRTGGVNGFEQAIVADVRYSHGFRLALRVHYI
FGFQGWLARELSQRFANLQTKRSVAQRLMQFSREQIGPLLGDDAAQQIVAAHQRRLDLVDNALQALNLQYPSYALWLQES
YLDRVARELERIRYRDMLEQFLISG
>AHV93017.1 fe-S protein assembly chaperone HscA [Bordetella holmesii ATCC 51541]
MALLQISEPGESPAPHQRRLAVGIDLGTTNSLLAAVRSSVPEVLSDADGHALLPSAVRYLPEGRVTIGRAALPHQASDPG
NTIVSVKRFMGRSAEDARDSGAPYDFVDAPGMVRLRTLHGDVSPVEVSAQILATLRQRAEDVLGDDLVGAVITVPAYFDD
AQRQATRDAAKLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLSQGVFEVISTGGDTVLGGDDFD
HAIVADLAASLGLENLSLSDKRGLLVAARAARESLTDVDQAVISVMLDAGRQVDMPLTRAHFDTLAAPLVDRTLQAARRA
LRDASLSAAEVKGVVLVGGATRMPVVRQGVAAFFGAPPLTNLDPDQVVALGAALQANLLAGNRAPGEDWLLLDVMPLSLG
LETMGGLVERVIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVADCRSLARFELRGIPPMVAGAARIRVTFQVDA
DGLLSVTAREQSTGVEAAVTVKPSYGLSDDEITRMLSDSVSYADDDAKARMLREQQVEARQLVESVSAALAADGDLLDGD
ERSRVDAALQAAAQAQSATEVDAVRQAVQALSDATEDFAARRMDRSIRAALAGRKLDELA
>AHV93018.1 calcineurin-like phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MTRVLHISDTHFGTVHESTQRALLDMVQLTAPDLVLIGGDVTQRARRTQFAAARRFVQNLQRPVLVVPGNHDIPLFNLAA
RVFNPYGNYRRALGVNLEPVFEDERLMVIGVNSTHPSRRKDGRVSAAQVQRVVHRLHGARDAQLRIVLLHHPVRAVEDSD
TANLLIGREFAVPAWVDAGADLILGGHIHLPYVVPLAGRLGRAAWCVQAGTALSWRVRGGIPNSVNLIERQAADHCLIRR
WDFDASLSRFQEVAAHPLALSRLSTPALATATAP
>AHV93019.1 mechanosensitive ion channel family protein [Bordetella holmesii ATCC 51541]
MKEWFIGMGALMPQLLELGINLLVALLILIIGWWVSSGLGRWVRRVAQRSARIDPTIVPMFQTTVVWAVRIFTVIAVLAR
FGVQTASLIAVLGAAGLAVGLALQGTLQNIAAGIMLLILRPIRAGEYVALSSGNEGTVEEVGLFLTRLVQSDGINITMPN
SAVWTSTITNYSRNVNRRCDIPVIIHYADDLEAAVSRLEALVKDHPLVDATPAPVVRAIEYRDNGTVVNVRVWTKAATYW
DLRWDLFQQIRSKLAEAGFRPPIPVREIQAPPSADKDAAA
>AHV93020.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MARSEPDGYTLLMGGPAVLVTNRFLQKRLAYDPDKFALVSMVAVTPNILLTNPSQPFKTLPEMVAYAKANPGKLTYASFG
TGTTSHMAGEMLKSVAGIDILHIPYKGAGEAIPALLSGQVSMYFDTIMTGLPQAKSGNLIALGMSNARRSALAPQIPTIA
EQGFEGYDIALWYGLAAPEGTPPAVLDTLNRAVNKVLADPGLRDKLAEAGAEPQGGSRESFAAFVKSEIPRTQKLIEQAG
VTAQ
>AHV93021.1 lytic murein transglycosylase B [Bordetella holmesii ATCC 51541]
MRRFAESLADERSLPLDSILAMLADTRYSSTVTRLIAPSVPGRKVWRSWNTYRSRFVEPKRIAWGVEFWNEHRAVIERAA
QQYGVPASIIVSIIGVETLYGRNMGNFRVIDALATLAFDYPEPVKPERVEMFRKQLADFITLTLQGKLAPDTQGSFAGAI
GMPQFMPTSIAHYAVDGDGDGHIDLASSVPDAVMSVGSFLQQHGWQRGLPVFAPVVLPANPSSLVDGGLTPKLDWAGLQQ
AGARVAPGAAASNWQSSPLGVVDLAEEARGTAQYRTATANFFVITQYNRSYFYATAVADLAAELQLRMGHR
>AHV93022.1 aconitase C-terminal domain protein [Bordetella holmesii ATCC 51541]
MLKADFNSYGSRRGNHEIMMRGTFANVRIKNLMIPARADGSRFEGGETLLQPSGQQMSIYDAAMSYVAQGTPSVVFGGEE
YGTGSSRDWAAKGTQLLGVKAVITRSFERIHRSNLVGMGVLPLQFKGDDSVQSLGITGEETYDISGLEHGIKPMQDVTLT
IHRKDGSKQDVTLLLRIDTPIEVDYYLHGGILPFVLRQLLAA
>AHV93023.1 sodium Bile acid symporter family protein [Bordetella holmesii ATCC 51541]
MRFLPDRFTLLLITTVIIASLLPAHGQGIEIFGWITNIAVALLFFLHGARLSREAIVAGVTHWRLHLTIFSVTFLIFPLL
GVIFKPVLEPLVTPELYLGILFLCCLPATVQSAIAFTSMARGNVPAAVCSASASSLFGIFLTPLLVGTVVASAAAAPISF
DAVGKIMLQLLLPFVLGQVLRPWIGAWVHRRKAMLKWVDQSSILLVVYTAFSEAVNEGLWHNTPVPALIGLVAACCLILA
VALGVSQLLGRVFKFDLEDRITLLFCGSKKSLASCELSIGCIRPG
>AHV93024.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPTKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHHGIGRAVPISRLNLDEYNLLTVHT
>AHV93025.1 hypothetical protein D560_0528 [Bordetella holmesii ATCC 51541]
MPATINVAVAAFTHSIPVEELRSFMAVRVLLKSPQYAEAASSDMPEIRLF
>AHV93026.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93027.1 adenosylhomocysteinase [Bordetella holmesii ATCC 51541]
MNAVSDKGFSDYIVADMGLAGWGRRELAIAETEMPGLMAIREEYAAAQPLKGARIAGSLHMTIQTGVLIETLVALGAEVR
WASCNIFSTQDHAAAAIAATGTPVFAIKGETLQEYWQYTHKIFEWPQDRHANMILDDGGDATLLLHLGTKAETDISVLDK
PGSEEERVLFAAIKETLARDPKWYSTRLAQIKGVTEETTTGVHRLYQMSQKGELAFAAINVNDSVTKSKFDNLYGCRESL
VDGIKRATDVMVAGKIAVVAGYGDVGKGCAQALAALRAQVWVTEIDPICALQAAMEGFKVVTMEQAAAHADIFVTATGNY
HVITRAHMDAMKDQAIVCNIGHFDNEIDVAAIEQDCQWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCATGHPSFVMSS
SFANQTIAQIELFTRNEQYTSGQVYVLPKHLDEKVARLHLKKLGVNLTTLSQEQAQYIGVPVQGPFKPGHYRY
>AHV93028.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV93029.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MSMPELLAFTRMTGDLVKAMRACPQPIVAAVDGVCAGAGAMMALAADMRLATAVTRTAFLFTRVGLAGADMGACTLLPRM
IGQGRASDLLYTGRAMSADEGLAWGFFNALHAPEELHDAAARLAGQLAAGPTFAHGMTKKLLHQEWNMGLDEAIEAEAQA
QAICMQTHDFRRAYEAFVDKRKPVFEGD
>AHV93030.1 outer membrane protein W [Bordetella holmesii ATCC 51541]
MDSVFRHARAIALATLCGVALSAPALAHEEGDWLFKLGVSQVRPKSNNGSVLNGTVGLDVNNNVRPSFTVTYMATRNVGI
ELLGAWPFQHDINGSGLGKIGSTKQLPPTLSLQWHFLPDSTVQPYVGVGLNYTHFFDTKARGALAGSDLKLKDSWGVAGQ
LGVDIKLNERWFVNADLRYIDISSKVKLNGDRVGTARIDPWVASVGVGYRF
>AHV93031.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MIDVLVIGGGNAALCAALMAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAAQDVLIDAYPEEEYWQDLLKVTGGMT
DEKLARLVIRASSSCRDWMRSHGVNFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAEKLGVQIRYDAAVDALELQDGR
FVAARIGAERIEARSCVLAAGGFESNLEWMRQAWGQNERGEWPADNFLIRGTRFNQGVLLKFMMEAGADIIGDPSQSHCV
AIDARAPLYDGGICTRIDCVSLGVVLNRDAQRFYDEGENFWPKRYAIWGRLVAMQPGQIAYSIIDAKAVGRFMPPVFPGV
RANSLAELAEKLQLDPQRFVATIDTYNQACRVGRFDHTSLDDCHTDGLTPAKTHWARPIDTAPFFGYALRPGITFTYLGL
KVDETAAVRFGGKPSDNLFVAGEMMAGNVLGKGYTAGVGMSIGTAFGRIAGTRAAAAARDLAQEGAHRAAA
>AHV93032.1 hypothetical protein D560_3027 [Bordetella holmesii ATCC 51541]
MAASLVGLLRTRLELLGQEAGHEKLRLLKTLGMSFAALLFLTLAVLVFTVTIAVAFWPTEHRYVALGWLAAIYGVIGVAL
LLLVRRELVDGPLPFSATLEELGRDAELLERVRDAQVDLERREADTSGGGR
>AHV93033.1 alpha/beta hydrolase family protein [Bordetella holmesii ATCC 51541]
MSLHLADVGSFYAGGEQVRLQGQPVRDIQFTRTAAYSYDPNGLYHFGQAYVQYFIPQRRVQPLPLVLLHGGGMTGSMWEQ
TPDGRPGWLRHFLQQGHAVYVVDNVERGRAGWAPFTDVWPDAPIMRTAEESWSLFRFGRADDYAQRRPFPGQRFPVQAFD
AFIRHAVPRWLGNNDAALAAFCAVLDRVGPCLVLAHSHGGEVAYRALHERADLVRGLIGIEPSGFSADVRADCVADKRFL
FVYGDYLDATPLWAQLSASGLAYAARLSGQGARVQTWKLADMGIAGNSHMLMMDDNSDALAQRIGEWIMQA
>AHV93034.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MTDTIAWSRELHTLAQRFGQAIAVDDGHAQLSFADLNGRAHALACALQAQGVGAGDYVGIYLPNGGAAVWADYGVTISGA
CLVHLNAAYTRDEIMWAQQLTPMRHIITDRALAPTVADLGAALVLCEDIAPLDTPPVLPAVNAADPGRVIFSSGTTGKPK
ALLYDQGRRWLAAVILRAVLPFTPGPGSRVLLMTPYVHGASMQARAWLDHGGTAVLLKGVEREAVGRELRSGTLDAVFAP
PTMLAKLAASFDGERFPSVRCVFTGTQTLTPGLYAKARAMFGPTVRITYGKSENVNPITVLDPQATQACFDANPAEGACL
GWPAPGVQLRINDHDEIELRSRHMYIGHIDQEGFHAPPADGWHRTGDLGRIDEHGRLWLLGRMADVIKSGGYKIYPDEIE
AALAGMPDCGDICVVALPSDYWGEVIIAVAEHAAPAWHEAARQRVAQLARYKHPRAHIAVAALPRNPQGKISRRAVRDLV
LSTHTLIDGSYPSVEARGSIHPSVGTFDGLPPDR
>AHV93035.1 hypothetical protein D560_2030 [Bordetella holmesii ATCC 51541]
MSAIQAARRQPRLRGGTTKAAGSGIDIRGVRGVTAGG
>AHV93036.1 dnaJ C terminal domain protein [Bordetella holmesii ATCC 51541]
MEFKDYYKILGVESSASEDDIRRAYRKLARKYHPDVSKEADTETRMREVNEAYDVLRDKEKRQAYDNLAAGVSPDGGFEP
PPGWDQGFEFHYQPGEGDGDGRFSGFFSALFGGQQRNRARQENFRARGQDQHAAIEVDIDDALGGATREISLRSMQADAQ
GQPQIHTRTLSVNIPAGVREGQFIRLTGQGMPGYGGGEAGDLYLEIRFRAHDRYRAEGRDLYMELPITPWEAALGASIQI
PTPGGQLEVSVPAGSKSGRKLRLRGRGIPGNPPGDLYLVLELALPPADTEAARQAYKTLAEQLPFNPRRHLGV
>AHV93037.1 hypothetical protein D560_2959 [Bordetella holmesii ATCC 51541]
MCVVSLVATLVACASQPVVRSDYDHKVDFAQYHSYGFMSPLGTDKAGYSSLLTERLKDAVRQEMARRGYVYNENQPDLQV
NFSAKLENKVQIVQAAAPPMPYYAYRGGFYGGWPGYGWGDDVYQYTQGTLNVDLVDRRRKQLVWEGVVTGEVSEPNWAES
QQRVDAAVALIFQKYPFIAGAASPAAK
>AHV93038.1 putative capsule polysaccharide export inner-membrane protein [Bordetella holmesii ATCC 51541]
MLIAVPGALLAFYLLVIAADQYVSEARFGLRAGSVTQASAASREGHSTLGGGEMTAELFVDSFAVVDYVKSRQIVRELDR
TLNLRKMWSKPGIDFWYRVPADASEEALWRHWSRMIDIQFDMSTGAIILRVRAFTPEDSLRLSQAILQASEKLVNQMSKK
AREDSVRFAHLEVEEAEQRLSAARFKVQDLRASTGVLDPVKEAEANLQLAAKVRGDIATTAAEVATLRAGGVRGGPGLER
AQARLRALQTQLSDLNDQQISVGSKTGKTGSLSTVLREYESAETERQFAEVYYTGALKGLEDARSLAARQVLYTVIASQP
TLADESQYPRRWVDTALGLLGFLILWIVVVLVVYAIRDHA
>AHV93039.1 peptide deformylase [Bordetella holmesii ATCC 51541]
MIHPILKMGDPRLLRVAAPVTDFGSAALRQLIEDMFETMIAANGVGLAAPQIGVDLQLVIFGFERNPRYPDAPAVPQTVL
CNPVITPLSDEMEDGWEGCLSVPGLRGRVPRYRHIRYQGSDPDGQRIDREASDFHARVVQHECDHLIGRLYPSRIQDFSQ
FGYTEILFPDMDPNQDD
>AHV93040.1 phosphoribosyl-AMP cyclohydrolase family protein [Bordetella holmesii ATCC 51541]
MSTEPDWMADVVFDTDGLIPAIAQDAENGQILMVAWMNREALAETAATGRAVYWSRSRKKLWRKGEESGHAQQVHELRLD
CDGDVILLKVHQNDGIACHTGRASCFYRRLDGPSARATWVSVDPVLKDPELIYK
>AHV93041.1 antisigma-factor antagonist, STAS [Bordetella holmesii ATCC 51541]
MSLHSFSRGQWLSNPRADILAGVLVALALIPEAIGFSIIAGVDPRVGLYASFSIAVIISLVGGRPGMISAATAAVAVLVG
PLVKQYGLDYLFAATILMGVFQVIAGFLRLDLLMQYVSRSVITGFVNALAILIFMAQLPQLIGVSGVTYVMVAAGLAIIY
LLPRLTRVVPSPLVAIIVLTAVSIYWGLPVNTVGDMGALPSALPAFALPAVPFTLDTLRIILPYSLTMAAVGLLESMLTA
QIVDDMTDTPSDKRRECKGQGIANAVTGFLGGMGGCAMIGQSVINVRSGGRSRLSTFVAGAFLLFLIVGLGPLVARIPMP
ALVAVMIMVSICTFSWESLLKLRTHPWQSSLVMLATVAVVVWTHDLARGVLTGVVLSGLFFASKVRRMFVVQTRLSPDGR
TRRYDYRGQVFFASADRFAEAIDFKEDVDGVLLDVTAAHFWDISAVGALDKVVLKLRREGKRVEVVGLNEASATLVGRFS
AHDKPHASSSNP
>AHV93042.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MTTLYDFSAASLDGTELPLAQWRGQVVLVVNVASHCGFTPQYSGLEALQQRFAGQGFSVLAFPCNQFGRQEPGDAAEIRS
FCDTRYGVTFPMFAKIDVNGGDAHPLYRWLKEQKPGVLGTEAIKWNFTKFLVGRDGQVIARYAPTDAPGSLAEAIEQALA
VPQT
>AHV93043.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MSKLRIALALAGLVASAAVSAQTTLRIGLQDDPDVLDPVRARTFVGRIVFASLCDRLVDITPDLKFVPQLAESWSTSEDG
KSLTFTLRKGAVYHDGAPIDAASVKANLDRAMTLPDSNRKSELSSVASVEAPDAQTVVLRLKEPDASLLSQLSDRAGMMI
SPATFDKDPGSKPVCSGPYRFKERVQNDRIVLEKFPQYWDAPHYHFDQVVFTPIPDSTVRLNNLRAGGLDIVERIAPSDA
DAVKNDAKLTLAPVTGLGFQSIAVNIGNGARADTPLSKDARVRQALDLAIDRDVINQVVGQGMFQPAHQPFLPASFAYDK
SVEHAGRDPKKAKELLKAAGHDRVKFELTYGNNTTMQQVMEIIQAMGAEAGFDITLRPLEFAAVQAALARGDFQVGQTGW
SGRVDPSGNIHQYVSCKGNLNDGRFCNADVDKLLNEARVTSDEGKRRALYSQVLQTMQAERPQIYLFYLPWVFGAQKKLE
GFVAYPDGLIRLKDVKVAKK
>AHV93044.1 cytidylyltransferase family protein [Bordetella holmesii ATCC 51541]
MIKAAIAGQPGLAVNSTEIDRGGATYTVDTVRALPAAATFTWILGADQLANFCTWRDWQEIVRRVDLAVATRPGTPLQAP
DALAVLLAQQGKSLRELPFTPMAISASDIRQRLASGQSTAGLLPAAVSRYIAEHGLYLAA
>AHV93045.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MKTSAGVRAAVGLALAAAATTPALAQNKVVNVYNWAEYTAPDTIPGFERESGIKVRYDIYDNNDTLQAKLLTGKSGYDIV
VPSTHYASRQIEGGLFQKLDKSKLPNLKNLDPDVMALVAQVDPGNEYAVPWGYGTNGLGYNVTKVKQIMGEDVDLANWDM
LFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSDKPEDYKAALEVLKKIRPYIRQFSSSGYIDELAVGDLCMVYG
FSGDVMIARNRAQQAKKPYDINYFIPKGGAPAWFDLMVIPKDAPHPDEAHAFINYIETPQVHAAITNTMFYPNANKEARK
YVVKEVADNPMIYPSPELSKSLYVIKAQPLPIQRLQTRMWAELKSGR
>AHV93046.1 anti-ECFsigma factor, ChrR [Bordetella holmesii ATCC 51541]
MLINADFTRRAIVASSSYQWVASPQGGVERVMLDRVGAEKARATSIVRYAPESYFPAHPHPGGEEILVLSGTFSEGGWHY
PAGWYLRNPPGSSHQPSSAEGAVIFVKLQQMPDNETRSVRINTRDPANWCREGAREVCPLFATEGEQVSLQRLATGANIL
EASQNGAEILVVSGTVVLEETRYEQGSWLRLPAGEPAVPRAGDQGATVYLKTGHLSDAEVAA
>AHV93047.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93048.1 TRAM domain protein [Bordetella holmesii ATCC 51541]
MGCFQYSPVEGAPANALADPIPEAVKQERWERFMEHQQAISAARLQTRIGREIDVLIDDVDEDGAVGRSSADAPEIDGCV
YVSSDTPVKPGDMVRVRVTDADEYDLWANRI
>AHV93049.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MDPGIFLIHALNALQYGLLLFLVASGLTLIFGIMGIINLAHGSFYMIGAYMAFALGPLVQAHLGGGFFVTLAVCVAAAVL
YWVVTRTRIGMMVRAGASNREMIGSLGVNINRLYRWVFAVGVAMAALAGALAAPVSSVYPGMGQGVLIICFVVVVIGGIG
SIRGTFLAAMLVAAIETFGQVLFPAAAGVLVYLLMATILLFRPEGLFRQG
>AHV93050.1 putative peptide ABC transporter permease [Bordetella holmesii ATCC 51541]
MGKLLIDSVYQLDRPVVVAYVMLVTLIFVIINLIVDIMYAALDPRVQLVAPAQ
>AHV93051.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MFLIEGIASLLVGIAAFFVLQDRIETVKWLSDDEKRLLADGLAADAGTRANHSVREVFRNPKVWLLSVLYFCIAMGNYGL
VFWLPTMIRSTGVADLGNIGLLSAVPSLISAVAMILIARHADRHNERRWHVAICCLLGAGGMLASVLLVDHMVWSIVALI
VAAIGINSIAPVFWGIPTAMVGGAAAAAAIALINSIGNLAGFASPYLIGFLKDSTGQLLPGMIVLALALVCGAVISVSMK
PVRSAS
>AHV93052.1 AIR synthase related, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSPAEIWSNESQERYVLAILPQDLPRFEAIARRERCPFAVVGVATEERQLRVVDGEGLPGLDAVRAQRADEVRPVDVPID
VILGKPPA
>AHV93053.1 proline--tRNA ligase [Bordetella holmesii ATCC 51541]
MRASNYHLNTLKEAPAEAEVASHKLMTRAGMIRKLAGGIYTYMPLGLKVIRKVEGVIRDEMNAAGAVELLMPVVQPAELW
VESGRWEQYGPELLRIKDRHQRDFVLQPTSEEVITDIARNEIHSYRQLPVNFYHIQTKFRDERRPRFGVMRGREFTMKDA
YSFDRDEAAAGRSYDIMFDAYHRIFRRLGLEFRAVAADTGSIGGSRSHEFQVIADTGEDLLVFNPDSDYAANIELAEAPC
LLAERAAPTETMQEVSTPGAAKCEDVAKLLGLPLTQTIKPIVLATESEDDGVQIWLLLLRGDHELNEIKAGKLPGLKNFR
FATEAEIVEHFGCKPGYLGPIGTIKPVRIIADRTVANMADFVCGANREDFHLRGVNWGRDLAEAELVTDLRNVVAGDPSP
DGKGTLAIQRGIEVGHVFFLGTKYSEALKATFLDETGKPAVMQMGCYGIGVTRIVGAAIEQNFDSKGIIWPRAIAPFEVV
ICPVGWGKSETVRNKAEALYAALREHGVDVILDDRDARPGVMFAEWELIGVPLRVTIGDRGLNEGLVEVQTRRQTEAEKI
SLDSALKEILNKLETL
>AHV93054.1 carboxylate-amine ligase YbdK [Bordetella holmesii ATCC 51541]
MEQIPFVSSSPNTLGIELELQLIDTASFDLTAAADELLAQLANHPVADRVKPEITRSMIELNSSVHEHPAGLLAEMREMR
EMRDALCEAADAVGVGVSGGGTHPFMRWQECSISDTPRFQYLAEMYGYLARQFTVFGQHIHLGVPSGDAAVRLVHGLSPY
VPHFIALSASSPYREGVDTLFSCARLNAVNSFPLAGHMPPDVSDWYRFEAHLAELRESGLAESIKDLYWDIRPKPEFGTV
EIRVCDTPLTVERACQLGAFAQALAVLLSREAPPPTKAWLAYRSNHFQACRFGLHGNYVTADGQRMRLSDHMKQLFERLT
PVAQELGTTDIIHALRDEVLRGGNDARWLRSQFNRSRELPAMVEAMTGAFRGEQAELPRPADALRRRIRANSEPVGSAMT
PTDPATMWPDRLH
>AHV93055.1 DNA polymerase III chi subunit, HolC family protein [Bordetella holmesii ATCC 51541]
MTRIDFAFGAPDRLRAACQTARKRFLAGQRLVVYCADANRLTAFDRMLWAFDDTAFVPHVLAQDALAADTPVVLTAADPT
QALTLAPQAWLLNLDDACPPNYAGFARVLEIVSASPEDKAAARARWRDYVSAGHQPQSHDLSRGA
>AHV93056.1 phosphate ABC transporter, phosphate-binding protein PstS [Bordetella holmesii ATCC 51541]
MKLPSADIVVVHRSDGSGTTFGWTNYLSKVSPDWKSTVGEGKAVKWPTGQGGKGNEGVAAYVGQLKNSIGYVEYAYAKQN
KLAWTQLQNKDGKFVQPEQKAFAAAAANADWKSAPGMGVVLTDEPGADSWPVTAVTFILVHKTQDKPAQGKSVLEFFDWA
FKNGAKSAAALDYVPLPDAVTNEIRGAWKNVKGADGKSVY
>AHV93057.1 phosphoribosylaminoimidazole carboxylase, catalytic subunit [Bordetella holmesii ATCC 51541]
MGVIMGSSSDWEVMKNAVAILESFGVPFEARVISAHRMPQDMAEYGAVARSCGLRAIIAGAGGAAHLPGMMAALTEVPVF
GVPVPSKYLRGEDSLLSIVQMPKGVPVATFAIGEAGAANAALHAIANIATTDDDLHAKLVAFRAAQTEAARAMSLPV
>AHV93058.1 NMT1-like family protein [Bordetella holmesii ATCC 51541]
MSVTRRDLLKLAGAAGAMSMAPAIVRAQKLEKTKVQIAVGGKPLIYYLPLTIAEINGYFKDEGLDVSIADFAGGSKALQA
VVGGSADVVSGAFEHTIAMQSKGQAYRAFVLQGRAPMIGVGVSKKALPNYKGAADLKGKKIGVTAPGSSTNMVVSFFLAK
HGLKASDVSFIGVGAGAGAVTALRGGQVDAMSNTDPVVSMLTLGGDMEIIVDTRTLKDTLEIFGGNMPAGSLYAPQAFID
ANPNTVQALTNAIVRADKWIQKAGVDQIAKTVPTNYLLGDPEVYKAAVKASLEGLSPDGVIPEDGAATAAKALAAYAGDI
DLAKIDTSKVWTNEFTRRANEKYPNG
>AHV93059.1 bacterial regulatory s, tetR family protein [Bordetella holmesii ATCC 51541]
MQDNRGTQQTILDSAERLFARQGYDGTSMRQITREAAVNLAAVHYHFGSKQALVQAVLKRRLEIVNRERLRLLDDLEAEA
GGSALKPSQIVDAFFGTLLRLAARSDQDDQAFMPLLERTMTDPAGFIRTLFADEYADVMERYKNALFRALPDVPRAEIMW
RFQFMLGATSYAIIGTDTLRIATGWAVQDDEQPDNPALLLPRLMSFLLGGLRAPLPPAPTGA
>AHV93060.1 glycosyl transferase 2 family protein [Bordetella holmesii ATCC 51541]
MQVEFRSKAFPLSRQSATAPLELAGETRSFFVEAQVSCIVPCLNEADNLRVLLPLLRSRLDALCSGWEIIVIDDGSSDAT
PDLMAEWSAIDGFRYVQLARNFGKEAAISAGLEAADGEVVICLDADMQHPPSLIEEMLRRWRAGAEMVYAVRRDRNDETS
FKRWGSRWFYRLLSGSRVQVPAGAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFRSEALPYTPDTRLHGRSHFRPMR
LFGLALDGLTAFTTWPLRALSVLGLAFALLSLMYGAYLVAAYLIVGNAVSGWTTIMTALLFFAGINLLSLGVVGEYVARI
FDEVKGRPLYVARQRRGRARATRKAGSR
>AHV93061.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLHSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93062.1 PPIC-type PPIASE domain protein [Bordetella holmesii ATCC 51541]
MKRILMLAAACAIAMPVYAQNVATVNGKAIPQKSLDDFVKLLVSQGATDSPQLREQVKQEMINRQVFVQAAEKQGIGKQP
DIQTEVELARQGILVRALMADHLQKNPVTDATVKAEYEKIKKEQAGKQEYEVRHILVEDEKTANDLLAQIKSGKLKFEDA
AKKNSKDPGSAERGGDLGWAPPTNYVPPFAEAVSKLKKGQLVDKPVQTQFGWHIIQVQDTRPVEFPPLEQVRPQLEEMMR
QQKLNAFQKDLREKAKVQ
>AHV93063.1 inner membrane transporter rhtA [Bordetella holmesii ATCC 51541]
MTRSPLYPVVLLLIAMASLQGGAALAKTLFPAVGAQGTAALRLFFSALMLLPVLRPWRLKLDAKGWRDVVLYGLTLGGMN
LMFYMSLRTVPLGVAVALEFTGPFAVAVLTSRRLRDFAWIALAAAGLLALMPHGDDLSSLDPEGVGYALGAGLCWALYIV
FGQRAGLRYGSRTVALAAGIAALGVMPFGLAHAGAAALFAPDLLPWAIAVALLSSALPYALEMQVLQRLPARTFGTLLSL
EPVFGAISGLFFLGETLSMTQWLVVAAIVIASGGITASSRRG
>AHV93064.1 cupin superfamily protein [Bordetella holmesii ATCC 51541]
MTLDQPLALLGGISPDDFMRRYWQRKPLLIRQAIPGFKPPETIAALKKLARRDDVESRLIWREQGQWQMENGPFARLPKA
SEPDWTLLVQSVDLHSDAAAELMQRFRFIPDARLDDLMVSVASDGGGVGPHFDSYDVFLLQAAGQRRWRYGRQKDLSLEP
DLPLKILSHFEPEHDVVLEAGDMLYLPPQAAHDGVAVGDDCMTISIGFRAPTQAALARGLLEAAADQAMARIGLLGGPYG
EPALPGPKLDGLYRDPGQAATRTPAALPDALVEATLDTLSKLRFDDALASRFLGCWLTEPSQLAVFDGAETDVDLEDNWP
ALGRLVLDRRSRMLYRGKQLFINGETAMVCAEPALKQLADARVLDCADPRCKRLSDDARSCLADWLDSGWLHYRA
>AHV93065.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MTPEQLLSFACVADAGNISRAAQQLHLSQPALSGQLRLLQDWFGEPLYRRSGHGIALTEAGERLAVHARQLRQVYGQARA
MRDAWRGLETGSLWLGGSTTPASYLLPALVAQFRAEFPTISLHLSDGNTRQIVERLASLDLAFIEGEVPAGLPADTEVHA
WRRDEVVAIVRADHALARRDSVTLAELAALPLVMREPGSGVRRLVEQAFEQAALPVVAGLELAGVEGVKQAVRAGLGAGF
VSVMSMRHEDGTLAALRLAPKALTRTLSILVPHAPGCSRAARRFLAACQAAV
>AHV93066.1 homoserine kinase [Bordetella holmesii ATCC 51541]
MAVFTPVSDQDARALLETYDIGELISLRGITAGIENTNFFLHTTQGEYVLTLFEVLTQQQLPFYIELMHYLAERGIPVPQ
PQTLKNGSRLTALHGKPAAIVSRLPGGYEPAPGALHCALTGATLARAHKAGADFPLRQPNLRGLTWWQETAPKVMPFLTP
EQTCLLNEELQAQRTAAAEPERSELPGGPAHCDLFRDNVLFAGTFDSPLMGGFIDFYFAGCDTWLFDVAVAVNDWCIDRD
SGEFIPELVHAWLAAYAQERPFTDAERRAWPLMLRAAALRFWLSRLYDYFLPRPAQTLKPHDPRHFERVLQARHRGVLPP
LP
>AHV93067.1 CHASE2 domain protein [Bordetella holmesii ATCC 51541]
MPVEGRALTRRSGFILTALLTLLAALLGSFTGLGRTDQMLYDRAQSLIGQPAQDDIVLVAIDDDSIATLGRWPWKRDVHA
ALLDKLRDARAVGLDLIFSEPDRDNPAADLALAQAIRAHGKVVLPVILDHLESAGSYQAPIPILAQAAADMGFINIPVDK
DGVVRRIAWQRTIVRAPVEPLLACHAARGRPARTRRARPFRSHEKRH
>AHV93068.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MARSSDTVFEKPSTLRSRVEEYLRTAIMQGRLKGGDKLREHELCEQLNISRPTLREALRTLEAERLITIEPHRGPTVVRI
TAKAARDLYALRALLEGYAAHEFARLASDDDLERLRLSVAALREQADKGDRVGLLAAKREFYDVLLAGCDNDLVSDMLPG
LLSRINLLRASSFGSPQRLPQSLTEIDRIFACIQARDPAGAQAAAHDHIVNAERTALEVLQRQDQDAGDGAADLRATTPR
GHASAAR
>AHV93069.1 hypothetical protein D560_1965 [Bordetella holmesii ATCC 51541]
MPEEALLAFDFGEKKIGVAIGNTLTRQARPLEIIFSERRDERFGRIEQLLKEWQPQRVVVGLALASDGGEQPATQRCRRF
ANQLHGCFGLTVELVDERGSSMEAQAELGSHAPDDAMAAAIILQRFLDRLL
>AHV93070.1 hypothetical protein D560_1921 [Bordetella holmesii ATCC 51541]
MSALTLASRLRPLTLASTLLAAALMAGCAQQRTEGYYNPPAASTVTDAQAQAQAANYRTVFNAPSQLQIELKPRQPGRQQ
AVQQATASNEQGVTAPSYDGAESADAAAPATASTAARELIPQAQTYQGTLPCLHADMNCTAQLVTLTLAPSGQWRARISY
LNGHPNAGKPAFEQGCWSALHERPPRVLLMEANGNVRADFTVPANNTLRVRAVNGHMPNLNYTLTRQPDLNPVSELDKQP
APHCGQ
>AHV93071.1 DNA repair protein RecN [Bordetella holmesii ATCC 51541]
MLRTLHIRDFVIVEQTDIHFGSGFTVFTGETGAGKSILIDALALALGGRGDASVLREGAARTDITAIFDTPAHLTAWLAE
RELEPAEELSLRRVIDAQGRSRAYINGMPATVTQLRELGETLVDIHGQHAHQSLMRPDAQRDLLDAHGGHAELRQLVAQA
WKHWRGLARQLETAERDADALTVERERLQWQLDDLDRLNLAEGEWDTLQAEHSRLSHAQSLLDGAGQIIEALDGEHDSAL
SRLNAASNRLQQMLRHDSGLHAIAEELESARIAMSEAISDLNNYLSRVDLDPDRLSAAEARLSAVFDTARKFKAEPESLA
SMRTGLREQLAHLQAAADVEALRAQVHAAQAQYDSAAALLSQARQRIAGDLGKHVSRAMQTLSMSGGRFEAALTAGPASA
QGNETVEFLVAGHAGTSARPLAKVASGGEMSRISLALSVIASRAARVPTLIFDEVDSGVGGAVAEVVGKLLRELGARHQV
LCVTHLPQVAACSNHQFRVSKSEKAGITRSRIAELDADERVEEVARMLGGITITPTTLEHAREMLQNTHTA
>AHV93072.1 phosphate transport system regulatory protein PhoU [Bordetella holmesii ATCC 51541]
MTEHTNKQFDADLGAVRSQFLQMGGVVEAMIHEAIEAMATGDMSLVEKVREREKEVNRHEVEIDERISLILARHQPTAID
LRTLLAVSKMLTDMERSGDEAEKIATAVRRMYDASQQQIPLIELRHMSVNVGNMLHQALDAFARLDPILAAQVVRNDKEV
DKEWKAALRNLITYMMEDPRTISRAIDMVFIARALERIGDHAKNMAERVIYMVKGADVRHTGVKNTERLARGEDAEPKSA
VGTDEQQAG
>AHV93073.1 phosphoenolpyruvate phosphomutase family protein [Bordetella holmesii ATCC 51541]
MNPRNKFRQLLKNEPFIVSPGVYDGYSIRLVEAAGFKTACTSGAAVSNALLGIADIGVMGLAENVTHCRNLARSVSIPLT
ADADTGYGNPVNVFHTVQMFEEAGVAGVNLEDQVSPKRCGHMPGKDVISQAEMVKKIEAACQARRDDDFVVIARTDAIAV
EGIEGAIRRARAYAAAGADMIFPDAVRTEDDIKRLVDAAGVPLTIKMGFGIRNRPTTPLIPLTRLKEIGVKRISLPRMLP
AAAIFGMRQALGVMQEVIATGEPVDRPDLLVGIEDIMQLMGYEQMRALEKRLTTLDE
>AHV93074.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93075.1 phosphatidylserine decarboxylase [Bordetella holmesii ATCC 51541]
MSIKDQIFLASQYLAPHHLVSRAMGVLADSRAPEIKNAMISRFVRRYQVDMSQALIEDPRAYASFNEFFTRALKPDARPL
DDDPHTIVSPADGAISQLGPIQAGRIFQAKGHSFGLSALLGGDDQRAAPFEGGDFATIYLSPKDYHRVHMPVTGTLREMI
HIPGRLFSVNPLTASHVPELFARNERVACIFDTEHGPMALVLVGAMIVASIETVWAGLVTPHKRQVRSMRYDALGREPIT
LTRGAEMGRFKLGSTVVVLFGPRRIRWLDTPSVRGPIRMGETLALPARDSADVIAI
>AHV93076.1 tRNA pseudouridine synthase family protein [Bordetella holmesii ATCC 51541]
MTRIALGLSYDGSSWQGWQTQPHGQTVQDTLEMALGRFSGIGAALRTVCAGRTDTGVHAAMQVIHLDTDLNRRAESWVRG
>AHV93077.1 dicarboxylate symporter family protein [Bordetella holmesii ATCC 51541]
MDTKKLTRYIGIAMVLGVVVGYVCNRYAQDAQHAKEIASYFSMVTDIFLRLIKMIIAPLVFATLVSGLASMSDGAAVGRI
GFRAMVWFVAASAASLLLGLLLVNIFQPGANLNLALPDATATTALKTGDFTLKAFITHVFPRSVVEAMANNEILQILVFS
LFFGAALVFVRRGGHTTIVNMIDELARVMFRVTDYVMRLAPVGVFAAMAAAITTEGLGVLVSYGKLIGEFYLGLALLWAL
LFGVGYLFLRRDVLRLGGLIKEPTLLAFSTASSESAYPKTIEALTRFGVPPRISGFVLPLGYSFNLDGSMMYQSFAVLFI
AQAYDIPMTFTQQLMLLLVLMVTSKGMAGVARASLVVVAATLPMFNLPEAGLLLIMGIDQFFDMGRTATNVVGNSLATAV
ISKLEGGRATTEEVASASNDDA
>AHV93078.1 hypothetical protein D560_3503 [Bordetella holmesii ATCC 51541]
MNKLCDKPANNAKIYASFAALTGTKLCRNQAKRQSKSGALL
>AHV93079.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MTLLQDLQSLLGPAHVLVGDDAEPYVLDWRRRYRGRALAVARPGSTEEVAAALRLCRQHGAPVVPQGGNTGLCGGATPDD
SGTAVILSTARLNRIRAIDTANDTITVEAGCVLRAVQDAAEQAGRLFPLSLAAEGSCTIGGNLATNAGGTQVLRYGNARE
LALGLEVVTAEGDIWNGLRGLRKDNTGYDLRDLYIGSEGTLGVITAATLKLYPLPVARCTALLTVGSVQEAVELLARART
GFGAALTGFELMAADCLHAVVRLFPQQRLPFEGASLQAPWFALLELSDSESEAHARERFEAVLGAAIEDGLVGDAAIAEN
LAQSQALWHLRESIPLAEAELGKAIKHDVSLPISAIAHFVQVTNAQLQARFAGVRNVIFGHLGDGNLHYNVARGPGQTEA
DLLALQPAVYEVVHRSVQAHGGSISAEHGVGQLKRDELPRYKSAVELTLMKRIKTALDPEGMMNPGKVLQAD
>AHV93080.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MSAENLSIGFADPLSSLDPQLNNHAGDRSVALHFWDLLVENKWNKLQPGLALFWKPLDSTTWEFKLRPGVKWQDGTPFTA
DDLIYSYTRARAVPGSVATYAGYLRTIESMSAPDPLTFVVKTKTPNPDLPLNLASVHVVSKHVGEKSATEDYNSGKAMVG
TGPYKFVSYTPGDRVVMERNDDYWGGKQPWDKINYRYINNAAARSAALLAGDVDVIDKVSVSDLDKLKQAPNISVYPYDG
LRVMLLQPNFNPAPSPFITDNAGKPLDKNPLLDVRVRQAMNLAINRPAITDRILQGAATEANQWMPKGTFGYNPDIKNIP
YDAARAKKLLAEAGYPDGFKLTMHVPNDRYPQGAETAQAIAQFWTRIGIKTQVEVVPWAVYSGRANKNEYAVSMLAWGNG
TGEASYALVNILATVSPQKGLGASNWGHYSNPKVDAALDASTSEFDVAKREAILRDSATIVSDDVGIIPLFHYKNIWAAR
KGLKVEPMTSDRTAAQMVSKDAK
>AHV93081.1 sulfate ABC transporter, permease protein CysT [Bordetella holmesii ATCC 51541]
MLPGFGISMGYAVFYLSVLVLIPLATLPIKSAHLGWAGFWDTVTAPRVLASYRLTFGAAFVAALVNLVFGTIVAWILVRY
RFPGKRIVDALVDLPFALPTAVAGIALTVIYSSNGWLGAPLERWLGLKVAFTPLGIVVALIFIGVPFVVRTVQPVLEDIE
REIEEAAASLGAGRWQTIRRVLVPALTPALLTGFALAFARAVGEYGSVIFIAGNMPMVSEITPLLIIVKLEQFDYAGAAA
IASVLLGVSFLLLLIINLLQGWQARSGGRLA
>AHV93082.1 NADPH-dependent FMN reductase family protein [Bordetella holmesii ATCC 51541]
MSTLNIAVFVGSLRAESINLRLARALEKLVPGQVKFHYVDLNVPLFNQDLENDMPAAAAKLKQHIKDAQGVLFVTPEHNR
SIPAALKNAIDWGTRPWGQNVWIGKAGGIVGTSPSAAGTAMAQQHLRNILAAEGVNVLTTPEVFLQMKDGLIDAQYQITN
EDTRKFLQGWVDRYIDWVSKSV
>AHV93083.1 hypothetical protein D560_0790 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSVPCRSG
>AHV93084.1 hypothetical protein D560_3147 [Bordetella holmesii ATCC 51541]
MTSALFNSSVPVLKQLLSALSDVLKKAEDQATLKNIDPDAYLGARLFPDMFPLIRQVQIAADFAKGISSRLAGADVPVWE
NTETSFADLQALIAKTLAHVESFTPEQFAQSDTREIVLRPGTPKERILTGSTYLLHYGLPQFFFHVTTTYAILRHNGVEI
GKRDYMGQY
>AHV93085.1 SMC domain protein [Bordetella holmesii ATCC 51541]
MKLHRIVLQEFRKFRDTAALENLHTGLNIIAGANETGKSTYALALRAAFLERYGTSKVADLAPYGLSGARPSVTVAFEHA
GHQYELCKQFLHRARCELRIDGQRLEGEEAEQALAKLLGFDIPGRGQSKPEHAGVPGLLWIAQGSGQDIAEPAQHAAGQV
REALTQITGELASQGGDRLHAQVQEARAALLDARGGKPKGAYKAAEDNWLRLGQAREALLRESAELEADVDRLASWRAEY
EQNESQAPWLALEAQAAQAQARLQALAREQEALDRLRQEADEARRLALALREQIARDQQDSEALGQLRADATAAAQAAAQ
ASDVAARNTQARQRAESALLQARAALESLQEARRQSEMRDALRRVINDEARLTEALQAAQESAIQGERIQAQLGQIRIDA
ASCELSIGCIRPG
>AHV93086.1 hypothetical protein D560_0108 [Bordetella holmesii ATCC 51541]
MPCFAEGASVYSPREAVHAAVTHGREIVDGLITMSRAV
>AHV93087.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MTFTLVVEQLLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVAVAAIATGVVGALL
ELVLIRRLAVRDHLAQVLGSYAVILIANDLVKMIWGPAPMMLNMPAALSGPVRLLPDLLYPAYRLMIIVFGLAAAAGLYW
FVTRTRAGILVRAGASNRQMATLMGVRVPVLFLGVFTLGAMLAAVAGALLGPVTAVQIGMGEEILILVLVCIVIGGIGSI
RGAFVGALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAILIYVLMAAILVFRPSGLFPARG
>AHV93088.1 hypothetical protein D560_2988 [Bordetella holmesii ATCC 51541]
MFPEFRDQISRLKTENPHFAKLFDKHNQLDQQIQNMEAGRETATPLEIEKLKKEKLHIKDQLYVLLKDA
>AHV93089.1 receptor ligand binding region family protein [Bordetella holmesii ATCC 51541]
MQFKPQKLLIAIAAAGLIPAVHAADIKLGVAEALSGGAAQYGNSIRNGFQLAADEINAAGGINGNKLVLVVEDEQGKKEE
AINVFKKLIFKDNVLMVFGPTLSNSAQAADPIAQAAKTVAFGTSNTADGITSIGNYVFRNSVTEADVLPATISTVKAKTG
LKNVAVLYGNDDVFTKSGYDNFKKALEDQKIPVTTTETFAKGDVDFKAQLTKIKGTNPDAIVLSALLAEGAPIMVQARQL
GLNVPVIGGNGMNSVKIFELAPGGASNNLWIGSPWSIENKTPQNTKFIEAYKAKYGNAPDQFSAQSYDAMYIAAQALKNT
KLTGDLPKDRAALREALPAVQWTGATGPFKFRQANDRAGKPAGYDADQAPIISVTKDGKYVIEK
>AHV93090.1 signal recognition particle protein [Bordetella holmesii ATCC 51541]
MLDNLTQRLSRVVKTLRGEARLTEANTQEMLREVRMALLEADVALPVVRDFVARVKEKALGEDVSSSLTPGQALVGVVHK
ELTSLMGGDLGPGSGELSLAVQPPAVILMAGLQGAGKTTTTGKLARWLSEGEHTQGGRKTGKKKVLVVSADVYRPAAIDQ
LKSVAAQVGVDFLPSDPSQKPEDIARNAVEHARRHHYDVLIVDTAGRLGIDEAMMREIAALHALVKPVETLFVVDAMQGQ
DAVNTARAFAEALPLTGVVLTKLDGDARGGAALSVRHITGKPLKFVGVSEKLDGLQAFHPERMAQRVLGMGDIVSLVEQA
QKNIDIAEAEKLAKKIKSGDKFDLNDFREQLGPVKKLGDMNSLLEKLPSQFQQAAGQLQGGQAEKQLRRTEGILNSMTAG
ERAKPELIKASRKRRIAAGAGVPVQEVNRLLNQFEQMQGMMKQMKKGGMAKMMRAMRGLKGMGRFGGFGR
>AHV93091.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MKYAFIKAHEEQYAVRRLCAVLGVHPSGYYAWKVQPVSARGAQDKRVGALIEQCWEDSGRIYGYRKISSDLNDMGERCGK
HRVARLMRQAGLRSHTGYGRRPGGRGTRPSVVAPNHLQRQFRVDAPNQVWVTDITYIRTHEGWLYLAAVLDLFSRQIVGW
SMSDRMTRELAINALLAAVWRRKPEAEVLVHSDQGSQFSSHDWQDFLKAHRLRPSMSRRGNCYDNAVAESFFQLLKRERI
RRKIYSTRDQARADVFDYIELFYNPRRRHSYIGQVSPVEFERRYFLMNGTV
>AHV93092.1 aldehyde dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MKQHFIDNRFVAGSTQDSIDVVDPSTGVVFEQIARGNAADIDRAVQSSRRAYEGAWGSMSAAERGRILLALSLKILEHHD
ELTQIESRDCGKPIKQARADVTAIARYFEFYGGAADKLMGESIPYQNGYTVLTLREPHGVTGHIVPRNYPLQIFGRSVGG
ALAAGNACVVKPAEDACLSLLRVAELAADVGLPPGALNIITGYGHEAGDALARHAGIDHISFTGSPRVGILVTQTAAENH
VPATLELGGKSPQIVFADADLDALIPVAVNAIVQNAGQTCSAGSRILIQRSIYDEVMQRLSKAFSALRAGPAGLDLDCGP
LIRKSQLERVQSFLRQAEADGIATAAQGTVIDGADGYFQAPTLLSNVPVDHLLAQEEIFGPVLVAIPFDDDADAIRIANA
TQYGLAASIWTRDGARQLRLARKIRSGQVFINNYGAGGGVELPFGGVKASGHGREKGFEALYSFTVLKTIAIKHD
>AHV93093.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MCCTPGVPWAASVATLPRIVVHSDAPDSPLLESTVTGTLLELTPLQTPASIDIIDSVQLRERAAPTAIDAITQATGISAM
RHPGNGASSLSSRGFSDSNSVALLYDGVRQFGGVGQTFVYDPWAVERIEVLRGPASVLYGEGAIGGVVNVIPRKPAPGPI
ENEIQLTAGTHDTQRPGFGSGGSLDDRWSYRLDISGNHTDAGLSLGDSRNAAATGALRLDVSPELRLTLTQAFSWQEPTR
YFGTPLVDGELDDGLRRQNYNVTDSKIIYRDHRSELRADWQPNTTTQVRARIFYIGSDRDYRNAENYRWLPSGLIERSAY
TDIQHDQSQAGAMADASFTGQLLGLDNRVAVGLETNRATLRHTNNSPYGGSSVVDPYDVTHGQFINLAGTTPRYRNTAEQ
YALFAEDRLQLTPQWSLLAGIRYDHIDLKRRDLIADRTAYRTQFDNVGWRLGSVYAFTSQLSVYAQYSEAADPVGSLLLL
SPANKGFDLSTGRQVEVGVKQVFWDERGQWTLAAYQLRKDHLLSRDPANPGLSVQVGKQSSRGLEATLGLQLSADLRLDL
NAAVLRARYDDFNEAQAGQTVSRAGNVPTDVPERVANAWLSWRVAPQWTAAAGLRYVGRRYADAANTLEMAGYTTTDLAI
IWQARRDLTLALRGYNVFDRHYAETAYYNQTQWLIGEGRRVELSANYRF
>AHV93094.1 enoyl-(Acyl carrier) reductase family protein [Bordetella holmesii ATCC 51541]
MLHAIAYAPRDDLQGRVTDCSRAGFLTAMDISCWSFIRMAHLAEPLMPRGGTLFCMSYYGSEMVVEHYNMMGPVKAALES
ATCYLAAELGPQGIRVHAISPGPLKTRAASGISGFDDLLYKAQEKAPIRSLVDIDDVGEATAWLATDAARRMTGQTIYID
GGYHIVD
>AHV93095.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Bordetella holmesii ATCC 51541]
MYAFIFVHKMVLQAMGYLAVRRALAALGLTLTTLLPGVACAQGAAGGALGLPAELAQAWKASKLPDEALSLVVQEVNGPR
LVAINAKAPRNPASVMKLVTTWTALSELGPNYVWRTDFLTEPGARPDAHGVLTGPLYWRGGGDPQFLLQDLWTLLRELRL
RGVKEISDLVVDRSIFGQVATDPGAFDGAPDRAYNASPDALMVGFGALRLLLTPDAAARKWVATVDPPLPGLRLEGAIQW
ADGRCKSGTDVTTQPVVTDQGITLRLAGSVPGACGEFSLYRLALSQQDYTDAVFRLLWRELGGNFKGKMRPGMVPADAVV
LASHESPTLGEAIRVINKRSNNVMARALLLTLGAERGRRPATVASSEAVAKTLLSDQGLNMPELVIDNGAGLSRLARVSA
DSLASMLTLAWRSPVMPEYLASMAIAGVDGTVRRRMKGNGTLGMAHLKTGSLRDVRSLAGYVLGSSGKRYVVVSMVNHEN
ADAVRKFDDALIAWLAEQ
>AHV93096.1 dihydrodipicolinate reductase [Bordetella holmesii ATCC 51541]
MRIAIAGASGRMGHMLIEAILNTDGVDLTVALDRKDSAFVGQDAGAFLGRETGVLISDNVDSLAHADCLIDFTRPEGTLE
HLQACLKHGTRTVIGTTGFDDAGRAAIEVAAQKIAIVFAPNMSVGVNATLKLLDMAARILNSGYDVEVFEAHHRNKVDAP
SGTALAMGEAVASAWNVALPDVATWSRHGETGARKPGTIGFSVVRGGDIVGDHTVYFCGTGERIEITHRSSSRATYAQGA
VRAAKFLDGKRNGLYDMQAVLGL
>AHV93097.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MFFWAMTLSLFVLFATLTPPVGPLLFVALMPVFTLMTLSACKHIEAGRVMLPSMWPKPLLRPGVFRKLFLMGLLYAGLSL
AGGLLAFLPFWSDLAEGLRAVQIEQNIMPFVAAVRIPLFLFTIIYVTIAALFWHAPVLVGWHGLRLVQALFFSGVACWRN
KWAFLVYCAVWIMIFLFIDLCAGLLVSLGVPASVANIVQIPINVAAAAVLYSSFYPAYTSVFGIEETHTGLDHGDSAAA
>AHV93098.1 hypothetical protein D560_1873 [Bordetella holmesii ATCC 51541]
MISSRLGFRDRRYLVLGSPCGPAMAAARRLLDLEAIVHVACAQALEPRLEACRLGAPAERDAAKLVEELSDRVLQGIVIA
PWHVSPATLLGPDDAAWRERLDSHALLPLQLIQGLAAAGRLAAGASLVLCMPDAQGGDLAAAAASAGLQHALFHGRRELL
QAGLRVNFLSGQDIDAGPVLFLLSDASRWMTGSLIVADRGQRLRKVPMS
>AHV93099.1 bacterial regulatory s, tetR family protein [Bordetella holmesii ATCC 51541]
MVTLTASLRLRRPGRPARPDAGATRALLLDTATALFAQHGVSATTIARIAQAAGLTAAMVHYYFRNRDALLDTVVAERLV
PLIEYVWSPPDKVCSLRGMVRTIVARLMECADQRPWLAPLWMREVVNEGGELRDRVLAHLPTERLRAFAQELAQAQAQGQ
IHPGIDPRLVFLSILGTTLLPLATAGVWRRVWGQDQPLDRTAISAHACALIEHGLFSSRRRRP
>AHV93100.1 hypothetical protein D560_0212 [Bordetella holmesii ATCC 51541]
MNQRPAATARMKPAGPRPGRPGPAATTGWSGCCRRRRRT
>AHV93101.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKTFAELGIPDMVSHSSYSVAVRTGVDAAIREKLAAAVRQAVASEAMNKARQDLFLESYEGSLDDYKRELLELAREFEAS
ARKQDRTPP
>AHV93102.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MKQAAPPQRCARWPASRISQARNRVGLPQADFAELLGVSVRTLQDWEQGRRHPSGAAQTLLRVAILHPETLRDLPSTDEM
A
>AHV93103.1 formate dehydrogenase, alpha subunit [Bordetella holmesii ATCC 51541]
MTNHWVDIKNADVVLIMGGNAAEAHPCGFKWVTEAKAHNKAKLLVVDPRFTRSASVADFYAPIRTGTDIVFLGGVIHYLL
ENDKVQHEYVRNYTDFSFIVREDFAFEDGIYSGYNPEKRSYDKASWDYERGEDGFVKTDPTLQHPRSVYQLLKQHYARYT
PEMVERVCGTPVDKFHHVCETLASTATTDRAATILYALGWTQHSIGSQIIRTGAMLQLLLGNIGVAGGGMNALRGHSNIQ
GLTDLGLISNLLPGYMTLPNEGEQDFGKYIDVRAQKPLRPNQLSYWQNYKKFHVSLMKAWWGAAATAENNWGYDYLPKLD
KLYDMLQTYELMNQGKVNGYICQGFNPLAAAPNKAKMTAGFSKLKFLVIMDPLATETSEFWRNVGEHNDVDSSKIQTEVF
RLPTTCFAEEEGALVNSGRWLQWHWKGAEPPGEARSDIEIMSDLYTRMREMYRKDGGVYPDPIVNLSWPYSNPESPTAVE
LAKEYNGRALVDLTDPKDPTRVTRKGGEQLAGFAELRDDGTTASGCWIFAGAWTEAGNLMARRDNSDPTGIGQTLNWAWA
WPANRRVLYNRASCDVEGKPFNPRRSLISWNGKAWTGADIPDFKGDENPAGGMGPFIMNPEGVARFFARGGMAEGPFPEH
YEPFENPLGYNPLHPKQPLAISNPAARVFKSDLEAMGRVEDFPYVATTYRLTEHFHYWTKNVRLNAILQPEQFVEIGEAL
AKELGIANGSRVRVSSKRGHITAVALVTKRIKALTVEGRTVHQVGIPIHWGFVGIAKPGFLANTLTPFVGDGNSQTPEFK
SFLVKVEKA
>AHV93104.1 hypothetical protein D560_3653 [Bordetella holmesii ATCC 51541]
MVLATERIGEAEIYELDFVIGDLFENVLWACHVISIG
>AHV93105.1 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein [Bordetella holmesii ATCC 51541]
MKHQIVVCGAGIVGLSTALALARRQQRVAVLAPRTQVAPAEPDFYHPRVYAISPASQRFLAGLGIWDAMPASRLTPVMAM
EIHGDADGRVELNAWQAAQNQLAWIVESGEIERVLVQAARMFGIPWIEERALAWHDGEIETESGQRLAAELFVGADGAAS
PLRAAAGLKHESKSYGDIGLVMHLNAEQPHLGTAFQWFRDDGVLALLPLPDTREGAQVSMVWSMREERARQLLDMPATEQ
AAELEKRLFLASEGRLGRLDARSRLHGFPLTLERSQMVAPGIALAGDAAHRLHPLAGQGLNLGLGDVEALAHAVATREPY
REAGDIRVLRRYQRARAEPVLAMRLATDGLHRLFAAHNAPAAFVRNAGMRLVDALPFLKRRLIEDASRN
>AHV93106.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MLDLVLINARLMLPGQGLTEGILGVRDGRIVMIAAPGDAPAARETIDCQGLWVLPGLIDPHVHFGFGSPETDFETESRFA
ALGGTTSVLSFHRSADIRESFDAVRERALAQSCVDFGFHFGITSHLHVDTLNDISQRFGVFSYKLYMMYKGAAGLSKGFT
DIDDGLLYSALKTTAAIPGAIMGVHCENVEVIPVLRDPLRAAGRDDLKAWNEQSPDFLEAENVHRVCYFANKVGAAVNIV
YLSSREALDEARRHRRTPGAPPIYVETCPHYLFLNDESPAGTYAKVNPPVRGQDDVEAMWEGVMDGSITTIGTDHVPRKR
VTKDKDIWAATNGFPGTGLMLPILLHEGYHRRGVPLETLMKVAAENSARIYRMPSKGSIDIGKDADLVIVDPDLQRVVDP
ATLESNSDYSPYEGMTLKGWPVRTLVRGRTVALDGRITDQARAEPGGRYLNRY
>AHV93107.1 2Fe-2S iron-sulfur cluster binding domain protein [Bordetella holmesii ATCC 51541]
MSFQVTIEPSQHQFPVEPGQTVLDAALAAGIVLPYSCRTGACSTCKGKVVTGEFDAGNTPAQVLSPEQLAEGYTLFCQAR
PQTDLVIESAEVRLASDIQIRKIPTRVQSLTLLAPDVMEIKLQLPASEQFRYYAGQYIELILKDGRRRSYSMATAPHKGS
PLELHIRHMPGGVFTDHVFGAAATQMKEREILRMEGPFGSFFLREDSGKPIVLLASGTGFAPVKAMVEHMAHNDIRRPVT
LYWGGRRPRDLYMCELAQAWAASLPDFRFVPVISNALQEDAWAGREGFVHEAVMQDIPDMSGYQVYACGAPPMVDAARRE
FSLQCGLPAEEFYADAFTSEADLAKG
>AHV93108.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MISTANLTIQFGPKPLFENVSVKFGEGNRYGLIGANGSGKSTFMKIIGGDLESSAGNVSLEPGVRLGKLRQDQFAFEDMR
VLDVVMMGHSEMWAAMTERDAIYANAEATEDDYMRAADLEAKFAEYDGYTAEARAGELLLGLEIAVDQHNLLMREVAPGW
KLRVLLAQALFSNPDVLLLDEPTNNLDINTIRWLETVLNGYQSTMIIISHDRHFLNQVCTHMADVDYGDIRIYPGNYDDY
MLASTQARERLTANNAKAKERITELQDFVRRFAANKSKSRQATSRLKQIDRIKADQVEVKPSSRQNPYIRFEQNKVMHRQ
AVTIDRLSKSYDAPVIRDFSAMVEAGEKIAIIGANGVGKTTLLRLLATDLAPDSGSVKWSENADMGYMAQDVSDQFHQTD
INLFDWMSEYRQPGDDDQAIRSALGRLLFSSDDLPKAPNVLSGGEKNRMTFGRLMLGRHNVLLLDEPTNHLDMESIESLQ
FALEKFEGTLIFVSHDREFVSGLATRIIEILPSGEIVDYRGGYEDYLASRGIEA
>AHV93109.1 pepSY-associated TM helix family protein [Bordetella holmesii ATCC 51541]
MLVLPFMILLAVTGALYLFHNEIEDAWYHDLRHVPQAGGTPHTAAQIAATALAAQPGSTLLKYLPPSGPHASAQAVVRTA
GGTRLAVYVDPYTQHVLGSLPERDTLMWTIRRLHSLDYFGPVANALIEVAAGWSLLLVASGIYLWWPRGRRQGVVTVRGA
PRQRVFWRDLHAVTGVFTAFFIAFLALTGMPWSQVWGGKINQWANGSNFGYPAGVRVQIPMSDLRLADQGKTPWSLEQAR
VPQSPPAAASGHEGHAGHGEHAGHGAPLHAEHAGTSARPPIGLDHAVEAVEALNMAPGYAINLPVGPQGVYTASRSIPTT
CKSSVWCTWINTPASRYWT
>AHV93110.1 hypothetical protein D560_3034 [Bordetella holmesii ATCC 51541]
MIFQRGFAKIGIHGGRSEVINVVNETGYRCGPGPAKVLLSYSRPPG
>AHV93111.1 esterase family protein [Bordetella holmesii ATCC 51541]
MTMPATSRVAISAHGQQFDLEYAWIDTHRRDRPLLIFLHEGLGSVAMWRDFPARLCAESRCRGLVYSRRGYGQSTPRPKD
EPWPADFMHREADEALPALLHALQLDAQRPVLFGHSDGGSIALLYAALNPQRVSGVVVAAPHIFVEAVTLRHIAAARQAY
QDTDLPQRLARYHADADGVFWGWNRAWLDPGFGQWSIEDHLPALRCPALAIQGLEDEYGSLAQIEGIQRLAPQTQLLTLP
QCRHSPHKDQPQAVIRAVADFVGGLAGH
>AHV93112.1 phosphoribosylglycinamide formyltransferase [Bordetella holmesii ATCC 51541]
MAQVIDQYQPDYVLLAGFMRVLTPGFVNHYAGRLVNIHPSLLPAFPGLHTHAQALATGVRVHGCTVHFVTPMLDHGPIIA
QGCVPVLAGDTPEALAGRVLDVEHVVYPAAARWLAERRVSLTADHRVEVEGDPARLFTWPSVAR
>AHV93113.1 FGGY family of carbohydrate kinase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MTTSDYVLALDQGTTSSRAIVFDRKGAVRGVGQREFRQYYPRPGWVEHDALEIWSSQLEVAREAIRNAGVSAADLAAIGI
TNQRETTLLWERSTGRPLARAIVWQDRRTAPLCEHLRRDGHADWLQSRTGLVVDAYFSGTKLAWLLDHVPGARQAAERGE
LAFGTVDTWLIWQLTHGAVHSTDPSNASRTMLFDLHTQAWNEDILALLNIPPSVLPQVAPSSAVIGQAHPQWLGAPSRLP
A
>AHV93114.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type [Bordetella holmesii ATCC 51541]
MSARPAAVDSDAAETAEWRDALSSLFEAEGGERASYVLDCLLEHAGKLGVKLPRNASTPYLNTIGRAEEPAFPGDLDLEA
RLAGINRWNALAMVVRANQAHGELGGHIASYASEADLFEVGFNHFFRAGLAGRGSDLVYMQPHSAPGIYARAFLEGFLEE
EDLALFRQEIAARAQGRRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARYMRYLEHRGLATESDRRVWGIFGDGEMD
EPESIAALTLAAREKLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAEWNVIKLLWGGDWDALFAADDQEALARAF
SHTVDGQFQTFAAKDGAYNREHFFGQNPALAALVADLDDGAIDRLRRGGHDMVKIHAAYHRAVRHRGQPTVILAQTKKGF
GMGAAGQGRMTTHQQKKLDDQALLAFRDRFALPLSDDDCLNLRFYRPAADSRELRHLHARRRALGGYIPRRSRGDRSLAT
PPATEFAPFALHAQGKEMSSTMAVVRMLTQLLKHPELGPRMVPIVADEARTFGMANLFRQIGIYSAQGQLYEPEDIGSVL
SYREARDGQILEEGITEAGAISSWTAAASSYSTHDLPTLPFYIYYSMFGFQRIGDLIWAAADQRCRGFLIGATSGRSTLG
GEGLQHQDGASHLIASTVPNCRAYDPAYAYEVAVIVEAGMRRMLGEQHDEFYYLTVTNENLPQPDMPAHAAQGILRGMYC
VHRPQKALLRLLGAGPMLPEAEAAAELLRQRYDVQAEVWSVTSFSELARDGRRAERKAALGLEGEPAWLHQCLNTDLPTV
AVSDYVRAVPDQIRAWVPGHYRTLGTDGFGRSDTRARLRDFFEIGAEWIVLHALDLLCNQDSTWQAARDDQRSRLTIRQT
AAWLN
>AHV93115.1 carbamoyl-phosphate synthase, small subunit [Bordetella holmesii ATCC 51541]
MLPQLFPEGINRFPPAILALADGTIFRGVSIGAPGHTVAEMVFNTSMTGYQEILTDPSYSGQIVTLTYPHIGNTGVNVED
VEANRVYASGLVVRDCPARVSNFRATQSLPDYLTAQGVVAIAGIDTRKLTRILREKGAQGGCILVGEDAERAVELARSFP
GMSGQDLAKVVSQKDTTSWTQGTWQLGEGYTQPAQDRFHVVAYDFGVKYNILRLIADRGCRITLVPAQTPAEEVLKLNPD
GVFLANGPGDPEPCDYAIAATRVFLERKLPVFGICLGHQIMGLAVGGKTVKMKTGHHGANHPVQDLQSKRVFITSQNHGF
AVDAASLPANARATHISLFDGTLQGFELTDRPAFCFQGHPEASPGPHDIIVLFDKFISLMAGQK
>AHV93116.1 methyl-accepting chemotaxis (MCP) signaling domain protein [Bordetella holmesii ATCC 51541]
MAKNLRVATALTATMVVFVFLFVAAAAAGVLALRANRTHIEALGRGNIERANELSDTSARLFQARAQLADAKTFMEGGLE
EDRNAALARADALLKLAAQSAQRLRENPDEDDPGYAAVLAAYATLADKALWPLAAAIKGWNGIQANQLSDKILPTATQGY
VSAVDVYQAHAREQGRQMLHQAGLMVDRMALGALALLLLVLALALMIRLAFRRAVLRPLTEAGRHFERIADGDLTAGIAN
RGDNEIGVLYSAMGRMQGGLTQAVASVRSGVEAIHDGVGEIAAGAGDMSNRAARQAAILQETAASMTGLANTVSQTARNA
DLASGQAEGAARLARDGGLAVQNAVQSMQGISASAARIGEIVGVVDSIAFQTNILALNAAVEAARAGEQGKGFAVVAAEV
RSLAQRSAQAAREIKGLIEESRERVAAGSRQVEQAGQTMDAMVSAVDSVMRLVSDISHASAEQAEGISAISNAVAEVDRD
TQENAAMAEQTAAAAMELETQAQSLREAVAVFRLRGGQGSSAAVRSDRRSVGLEHHGQVPFLDLVLDVGSR
>AHV93117.1 outer membrane autotransporter barrel domain protein [Bordetella holmesii ATCC 51541]
MRYHLIHAAGSQADSFALNNSQVDIGAYRYQLALNQDGTQADDWYLSTSRQSMSETTRNAVMLANVTPTIWNSELFILRS
RLGELRGQAPSNSVWGKYITGKNRVTNNVAYDQTMNGFMVGADRQFDLQTARLFVGGLFSYSDSDLKADDSRGKVDSYAL
GMYTTWLHDSGYYVDGVVKVNRFKTDNDARFNAGTSKANDKTTGVGVSIEAGKHIVIDSFFVEPYLQLAAFRGGKTKYGY
SNGVQVEADSVKSVSAEAGLTLGKTFTLDSGALIKPYARIALNH
>AHV93118.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Bordetella holmesii ATCC 51541]
MTGFKRIAVLGSTGSIGDSTLDVIARYPENFGVYALSAFSRMDKLALQAAATAAAVVVVPDDAAANRFRQAWPGGAAMPD
IRVGAQALADTAADPACDTVMAAIVGAAGLPAALAAARAGKRVLLANKEALVAAGSLFMAAIRQSGAELLPIDSEHNAIF
QCLPHGGRADAPLAPAPGVRKLILTASGGPFRLRDLADLTDITPDQACAHPNWSMGRKISVDSATMLNKGLEVIEAHWLF
AMPADRIDVLIHPQSVVHSMVEYDDGSVLAQMGQQDMRTPIAYGLGYPQRLGAGVSPLDLAKWGKLEFETPDLQRFPCLA
LAYAAMRSGQAACVTLNAANEVAVAAFLEGRLPYTWIPRVIEAALEWQAGRPSVTLDRLTDVLDLDAAVRSYAGNLGLA
>AHV93119.1 hypothetical protein D560_3263 [Bordetella holmesii ATCC 51541]
MSVGTILIWGVAGAVLGDAISYLIGRWLGPGVTRRWPLSTQRTAVARARLFFYRYGFASVFLGRFLGPIRSTIPTVAGIM
RMNHARFQIANILSAIVWLPAMLAPGYFAARGLAAARQSQQFGLIAAALVSVVIGLWLATSLLKKRRLAAHRGR
>AHV93120.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MSLLLPALVLRAAVESDLPFLLALRRHTMEPHLRRDGMAVDEQAHLQRIRYHWDDARIVLIDDAPAGLLKVHHDEQGWYV
IQIQVVPSRQGQGLGSRLLGSVLQRADDGGQQVRLYVIRSNPARRLYERLGFRICERGEHVFLMCRPPGTGPVIAG
>AHV93121.1 endonuclease III [Bordetella holmesii ATCC 51541]
MNAAKRREIFERLRAANPHPTTELEYETPFQLLIAVLLSAQATDKSVNIATRKFFPRHGTPEGMVQLGEEGLTAFIKTIG
LFRTKAKNAIATSRIILEQYRGNVPQSREELEALPGVGRKTANVVLNTAFGMPTMAVDTHIFRVSNRTGLAPGKTVREVE
LKLEKVVPAEFKQDAHHWLILHGRYICVARKPKCPQCGIADLCDFRSKTAA
>AHV93122.1 3-isopropylmalate dehydratase, small subunit [Bordetella holmesii ATCC 51541]
MQAFTFHEGLVAPLDRENVDTDLIIPKQFLKSIKRTGFGPNLFDELRYLDHGEPGMDNSKRPLNPDFVLNQPRYQGASVL
LGRKNFGCGSSREHAPWALQQFGFRAIIAPSYADIFFNNSFKNGLLPIVLTELEVARLFDEVRAFPGYKLKIDLERQVVI
GADGREMAFEIDAFRKYCLLNGFDDIGLTLRQSDKIRAFEAERLARHPWLESRPVA
>AHV93123.1 coproporphyrinogen III oxidase family protein [Bordetella holmesii ATCC 51541]
MGGIFFDDLNDPGFEASFALTRSVGDSFLGAYLPIVERRQALAYGQRERDFQAYRRGRYVEFNLVFDRGTLFGLQSGGRT
ESILLSMPPQAQWRYDWQPEPGTPEAELAAFLTPRDWV
>AHV93124.1 heme ABC exporter, ATP-binding protein CcmA [Bordetella holmesii ATCC 51541]
MDKPVARLEHVSQHYGKTAALDDVSLDFPAARMVGLIGPDGVGKSSLLALVAGSRAVQQGSVTVLGADMANARYREQVCP
RIAYMPQGLGKNLYPTLSVEENLQFFGRLFGHDAAERRRRIDDLTRATGLESFLQRPAGKLSGGMKQKLGLCCALIHDPD
LLILDEPTTGVDPLARAQFWDLINDIRQDRPGMSVIVATAYMDEAQGFDWLIAMDAGRVLATGTPAELLSSTGSTSLEEA
FIALLPEERKQGHQPVVIQPLAVDEAADVAIEARDLTMRFGDFVAVDHVNFRIRKGEIFGFLGSNGCGKSTTMKMLTGLL
PASEGQAWLFGHEVDPRDIDTRRRVGYMSQAFSLYGELTVRQNLVLHARLFHVPEAAIADRVKEMVERFDLAAVLDSVPD
SLPLGVRQRLSLAVAMVHKPELLILDEPTSGVDPVARENFWRLLIDLARQDMVTIFISTHFMNEAQRCDRISLMHAGKVL
VSDTPQAIIEQCGAATLEEAFIDYLVQAGAGTQVPPETASAAVPSPPPAPAHTLRGFHFSRAASYMWREALELRRDPVRA
TLALVGSLILMFVMGFGISMDVEDLRYAVLDRDQTGLSHDYALNLSGSRYFIEQSPITDYSDMDQRMRAGKLALAIEIPV
GFARDVQRGKPAQIGVWIDGAMPQRAETVRGYVQGMHQGWLLDQARKQSGSSAHLAVSTEARFRYNPDVRSLPAMVPAVI
PLLLLMMPAMLTALSVVREKELGSIINLYVTPVSRLEFLLGKQAPYVALAMLNFLLMVLLAVTVFGVPITGSFVTLLLAA
LVYSVIATAIGLLASTFTRSQIAALFFTMMGTMVPAVQFAGLINPVSSLEGGGRLIGQIYPATHMLTISRGVFSKALHMH
DLYSAFWPLLLAVPIILGVSVLLLKKQEV
>AHV93125.1 acid phosphatase [Bordetella holmesii ATCC 51541]
MQRILTDAGLSTYGVKDKYQRTRPFVIHNEGTCRPDQEALLRNDGSYPSGHTAAGWAWALVLAEIHPQRANTLLSRGISF
GQSRVICNAHWQSDVDAGRIMGAATVARLHADPTFLADLELARKEVIAATAQHPAMECSSETAALSGTP
>AHV93126.1 tartrate dehydrogenase [Bordetella holmesii ATCC 51541]
MAAKKHRIAVIPGDGIGKEVVPEGLRVLDAAATRFGIDFQWDHFDWSCDYYANYGKMMPDDWMQQIGGHEAIFFGAIGWP
ATVPDHEALWGSLFRFRRDFDQYINLRPVRLMPGVPSPLANRQPGEIDFFLVRENTEGEYSNSGGRLFAGTEREVVIQES
VFTRVGADRVLKFAFDLAQKRGKHLTAATKSNGISISMPWWDERVADIATQYPDVRWDKYHIDILCAHFVQHPDWFDVVV
ASNLFGDILSDLGPACTGTIGIAPSANLNPERKFPSLFEPVHGSAPDIYGKGIANPIGQIWSGALMLDFLGYPQASQAVV
SAIETVLAQGPRTADMKGKASTEEVGRAIAGIVAKA
>AHV93127.1 helicase C-terminal domain protein [Bordetella holmesii ATCC 51541]
MPAGVLAALQKLVQAVGDHQAQTAQALPADDALLAFYFEALRFTRLAEQFGDHSLIDLQRHGEDAELGLRNVVPANFLAA
RHAGAHCTVMFSGTIGPQRFYRDMLGLPAATSWLEVAGPFRAEQLAVTVAGHVSTRFRDRPRSVEPIGAIIARQYAEQPG
NYLAFLSSFDYARQVEEWLARHHPGLPVWRQTPGMGEGEREAFLARFVEGGQGVGFAVLGGAFSEGVDLPGERLVGAFIA
TLGLPQLNPLNEAMKQVMERRFGAEHAYDYTYLYPGLRKVVQAAGRVIRGEDDQGSVHLIDDRYRWPRVRALLPQWWALT
>AHV93128.1 glutamate synthase, NADH/NADPH, small subunit domain protein [Bordetella holmesii ATCC 51541]
MGKITGFMEYQRLQEASEAPQKRLKNWREFVLHLNDDQAKQQAARCMDCGIPFCNNGCPVNNIIPDWNDLVYHQDWRAAL
DVLHSTNNFPEFTGRICPAPCEAACTLNINSDAVGIKSIEHAIIDKGWAEGWVIPKLPTRKTGKRVAVVGSGPAGLACAQ
QLARAGHAVTVFEKSDRIGGLLRYGIPDFKLEKSQIDRRVVQMEAEGVEFAPSTFIGNATDPAADGLSVRSPQSLLDDFD
AVVMSGGSEFPRDLPAPGRELEGVYYAMDFLRQQNKAVAGDRLSNQTLARGKHVVVIGGGDTGSDCVGTSNRHGALSVTQ
FELMPQPPEQENRAMVWPYWPLKLRTSSSHEEGCQRDWSVTTKAFKGANGKIEKLVGARVEWVKDEATGQMKMHEVEGSE
FEVKADLVLLAMGFVSPVQSVLDAFGVDRDARGNVRANTDDYQTNVSKVFAAGDMRRGQSLVVWAIREGRQCARSVDAFL
MGSSELPR
>AHV93129.1 response regulator [Bordetella holmesii ATCC 51541]
MKQPAVLVIEDHPVQRLVIVRALEMLGYTRVLQAQEGSQALEQLALHGVADIVICDVRTPGMDGTQFLRESSQRNLVKSV
ILSSDVPSDLTAAILHMASLSGIQVLGDLGKPLNLGRLESLLRRYESDSSTAPGNAQTRPKIRPAPTRFASVWIVASSSP
ITSPSSTCAHFSPLARRSSRAGFTLSAACSRRAASSKPSRIATNSIA
>AHV93130.1 fatty acid desaturase family protein [Bordetella holmesii ATCC 51541]
MDYILSFISGGLTQASWWQILAFTLIVTHITIVSVTVFLHRSQAHRGLDLHPAVMHFFRFWLWLTTGMVTKEWVAIHRKH
HAKCEKEGDPHSPMLFGIWKVLFRGAELYREESNNKETMAKFGHGTPDDWLERNVYTKHSLWGVLTMLAIDIALFGAMGL
TVWAVQMAWIPFWAAGVVNGIGHYWGYRNYNSPDTSTNVFPWGIVIGGEELHNNHHAHGTSAKFSAKWYELDIGWGYITV
MRWLGLAKVKKVAPKLTLDPDAKSIDLRTLQGVITHRYEVMARYADVIKKAAGEEMSKLKSSRRKGSEDCNWTVLKRARR
TLTRNEDVLRPAQLAEVDQVIAKNASLSTLVQMRRELGRLWESSSASSEQLLHDLQAWCQRAQQSGIAGLEQFAVNLRRY
AA
>AHV93131.1 dephospho-CoA kinase [Bordetella holmesii ATCC 51541]
MLKIGLTGGIGSGKTRVADMLGQWGACVIDTDAIAHALTQAGGLAMPAILQEFGPPSARPDGAMDRDWMRARVFRDPSSR
ARLEAILHPLIGPQTQAAADDAQGSYLVFVVPLLVESGRWRQRIDRICVVDCDPDTQIARVQQRSGLTESDIRRIMAAQA
ARSTRLEAADDVINNDGSTTAEALLARTRRLHERYLDLARMQDRPGQTAAGNP
>AHV93132.1 peptidase M23 family protein [Bordetella holmesii ATCC 51541]
MAAVLAQTRGYIARSLNQPVPGGVAVVDLGVAGKAPAATFQARPVLVVRDSDTRWVAVVGLSLKVPVGQQKLSVTQNGAA
RELAFAVRGKEYAAQHITLKNRRQVNPDPQDLKRIERELAAQNAAYAAFRADVTPSNVILDRPVRGGRLSSPFGLRRFFN
GQERNPHSGLDFAVPAGTPIRAPAAGKVVLVGDYFFNGKTLFIDHGQGPISMFAHLSAIDVELGEEVARGALVGKVGATG
RATGPHLHWNVSLNDARVDPAIFIQ
>AHV93133.1 polysaccharide deacetylase family protein [Bordetella holmesii ATCC 51541]
MYHQIGQPAPSGTPYRGLTVHPASFRRQMTWMHRLGYRGLSMRDLMPYLRGEKNGKVFGVTFDDGYRNVLENAAPVLEAL
GFTGTNYFVAHQMNGSNVWDAEKGIPYSGLMSVDEMRQWHAAGNEVGSHTLDHVHLPQLGAEEARRQIRQSKEELEQLVG
APVTAFCYPYGDHGPEHMAMAREAGYDNATLTVRGLARASDDPFGLPRVTVSRSTHLLRFLQKTLTRYEDRRRR
>AHV93134.1 ribosomal protein L34 [Bordetella holmesii ATCC 51541]
MKRTYQPSVTRRKRTHGFRLRMKTRAGRAILNARRAKGRKRLAV
>AHV93135.1 methyladenine glycosylase family protein [Bordetella holmesii ATCC 51541]
MDARKDFPDGHPRCGWVDQSVIYCDYHDQEWGRPSADDRHLFEQICLEGMQSGLSWRTILNKRDGYRQAFAGFDIDAIAR
FGREDVERLVQDAGIVRHRGKIEAIINNARRAREMREREGSLAAFFWRFEGPDRPLTDGAPTAEAIALSKALKNLGWSFV
GPTTVYAFMQSIGMVNDHHAECFAQQACAHARSHFKRPSA
>AHV93136.1 polyhydroxyalkanoate depolymerase, intracellular family protein [Bordetella holmesii ATCC 51541]
MLYELHEMQRAFLRPLAAFTDASSQLFSSPYSPLAYTPLSRQLAASCELIYRIGKEYQKPAWGLDSTTIDGRAVKVMEAV
ALDKPFCRLVHFQRDLRRTSAREDPRVLVVAPLSGHHATLLRDTVRALLPAHDVYVADWVDARMVPLSAGPFHLDDYVRY
VQDFIRHLGPDLHVISVCQPTVPVLAAISLMASADEAVQPRSMVMMGGPIDPRESPTQVNNLATTKPYSWFESQLIHAVP
LNYPGAGRKVYPGFLQHAGFMAMNPDRHLKSHYDFYLDLLRGDDSDAAAYRRFYDEYNAVLDMPAEFYLDTIRIVFQEFR
LPEGSWQIDGQLVHPQAIKKTALLTIEGELDDISGQGQTRAAIKLCRGIPAARKTHYTVEGAGHYGIFSGRRWREQVCPK
IAEFIRQA
>AHV93137.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIP
LRGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV93138.1 bacterial type II and III secretion system family protein [Bordetella holmesii ATCC 51541]
MTYSSRDFNATLQLLQSNGLARVLAEPTLLALSGQSASFLAGGEIPVPESGGLGTQNVTYKPFGIGLTVSPTVISRERIA
LKVAPEASELDYTNGTTIVNANNTTTIIPALRTRRADTMVELGDGESFLISGLVSRQTKANVSKIPLLGDLPIIGSFFRN
VQYSQEDNELVIVVTPRLVRPIARGVTLPLPGARQEVTDSGFNAWGYYLLGPMGGQQMPGFSQ
>AHV93139.1 lysine-specific permease [Bordetella holmesii ATCC 51541]
MPAESVSAPSGLRRTLSARHLSMIAVGGSIGTGLFVASGNTIAQAGPGGALLAYGLIGLMVYFIMTSLGELAASMPVSGS
FATYGARYVEPGFGFALGWNYWYNWAVTVAVDLVAAQLVMAYWFPDVPGVYWSALFLVLTFGLNALSARGFGEAEFWFSL
IKVVAVLAFIVMGVLMLLGIIRGGEGAGLHNWTVGEAPFVGGFAALIGVAMVVGFSFQGTELIGIAAGESRNPARDLPRA
VRQVFWRILLFYVLAIGIIGLLIPYTDPQLLRNEVGDIAVSPFALIFERAGLLAAASIMNAVVLTSVLSAGNSGMYAATR
MLYALAREGKAPALFGRVSRQGVPLVALLATAAIAALCFLSFLFSPNQVYIWLLNTSGMTGFIAWLGIAISHYRFRRGYV
AQGGRLQDLPYVSPYFPFGPLFAFSLCLAITLGQNYEAFLQDRIDWTGAAATYVGIPLFFLIWAGYRLARGSRFVRYAEM
EFPIRRRGEY
>AHV93140.1 D-alanyl-D-alanine carboxypeptidase family protein [Bordetella holmesii ATCC 51541]
MLAGSMPVMAQQQTPAAVSPAASMSAPATAAVADSVVAVGDLASVPAPTVAARAWITVDVNSGQVLAASNPDQKVEPASL
TKIMTAYVVFNALDEKRLTLERQVPVSEHAWRTGGSRMFIEPRKPVTADELIQGMIVQSGNDASVALAEAVGGSETAFAA
LMNEQAERLGMKGTHFMNATGLPDPQHITTVRDLATLATHLVADHPEYFHYYKQKSYTYNKITQPNRNRLLWADPSVDGM
KTGHTDSAGFCLVSTALRGDRRVLTVLVGADSESTRAEESLKLLNWSFQNFDTVKLYDKSQPGLDARVWEGKAENVKLGP
PNPIWLAVPRGKGSEIKPVAQRTDPLVAPLVKGQQVGMLQLTLDGKVLRSEPLVVQEDVERAGFFGRMTDTVKRWFQ
>AHV93141.1 bacterioferritin [Bordetella holmesii ATCC 51541]
MKGDKTVIQFLNKQLTNELTAINQYFLHARMLNHWGLNKLGKHEYEESIEEMKHADRLIERIFMLDGLPNLQDLHKLLIG
EDVPELLACDLKVEQTAQATLKDGIAYCESVRDYVSRDLLQGILDDTEDHIDYLETQIGLIDQVGLQNYLQSQMEVAG
>AHV93142.1 putative indolepyruvate ferredoxin oxidoreductase [Bordetella holmesii ATCC 51541]
MTANTYVAPVSDFTRQPDVPMRGDALLEKIRHAAGSEQTAALDAHGAALTLFGDSILSNIFLRGYAWQRGDVPLTLAALT
RAIELNGVAVASNRAAFDAGRLAAHAPQTLAFALKPPAQVIALHRPERLDDAVARRVADLTAYQNAAYATRYRRLIEEVA
ARERELGATPGRLALAVARGLFKFMAYKDEYEVARLYTDGSFAAQLKEQFEGDYQLRCHMAPPLLARKDPRTGVPRKMAL
GPRTLSALRWLARCKSVRGTWADPFGYTAERRMERDLIVEYESLVKRLLAGLTVDNIGAAATIAALAENVRGYGHIKAAA
VTRFRQDRDRLLESYEQPGFAPSEVRRSA
>AHV93143.1 bacterial OB fold family protein [Bordetella holmesii ATCC 51541]
MRLQVLLISAATILLPLAGGPAQAQYVGPAFNPNLTVRQMLSTAADDAHVVLRGRLVRRINHEKYLFDDGTGQVRVDIES
HLFPHGTPISDQALVEIAGEFDREIIGSSEVDVASLRVLNGSPAHARTEATPTR
>AHV93144.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MVSLPTPDVVRQVALGPEGIIAGDKVRIYVDLSTTGPKAAQEVGAALATRNIVAIDSPVSGGVGGAIAGTLALMVSGNPD
VVKQVIPALSEFGKPGIVGTEVGQGHSLKLTNNLLSATHLAITAEAMVLGVKAGLDPDVMLAIINTGSGRNAATEERFPN
HVLNRSFNNGFANALMRKDVRLCLDMAETLQVPLWVGTAVDRLWMQTVLQVGASQNSTTIVQTLEQWTGVEVRGKDAPAT
TA
>AHV93145.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MVREALLRLRADGLITAHQGLGTFVSHQPAPRLKTFPDVQNVSAYLRAQEVRVALEGDAARLAALRRSDAQLQRMEQAHA
DFLDRLADGKVSPQADLAFHASIAEASGNDFYLDVLENIHEAVSGFMRLALNLTRTGSRQRAERVAEEHAAILSAIRAQD
SERARVAMQFHLGQARHRLVDKERD
>AHV93146.1 hypothetical protein D560_3604 [Bordetella holmesii ATCC 51541]
MVGARSGPRPSARLRPQIVLAGKDDGLTRAWAEALLIHP
>AHV93147.1 extracellular ligand-binding receptor domain protein [Bordetella holmesii ATCC 51541]
MRFLPSVLAAAMLVPALASAESVKVGIANDISGPFAALGAEARDGFNLAIKQLGGKLG
>AHV93148.1 fecR family protein [Bordetella holmesii ATCC 51541]
MPPKTLKRAAPGIAPLEQAAEWFALLRSGEATAAERAAWQAWHDACEAHTRAWAQVESVGRLFLPIRQSEASGVAATAYR
RAEFNSGRRRTLLGIGALAAAGVVGHAAWRHNVLYPWAADYRSGTGEVREVVLDDGTRVWLGTASAFDQHYSAGLRRLEL
IAGEILISTAPDASRPFVVDTPQGRLRALGTRFSVRRDDGGTDVAVYQGSVQANAPSGAQALLLAGWRARMTRQGISAPR
AADPDAESSTRGLFIAKNIPLADMARELSRYRLGHVGVAPDVAALPVFGSFPMTDPDRTLNMLESVLPVRVRMLPWWVDI
LPR
>AHV93149.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MVAEKMGPVLGQSMIVENRPGATGTIGAANVATAAADGYTLLMGTVSNIALAPSFYPVKYDPVTSFTPIGMVANVPLVLV
ASPSLGASNYAQLIAAMKSGKGAKGGGYAYSSPGFGGPQHLAGVLLQKQIDTPLLHVPYKSGGAAITAVASGETQLAFAG
IPAAASLAQAKKVVPLFVTSNARMKAMPDVASASEAGLPGMEIDNWHALFAPAALPAEVQAKLEAALIETLEAPALKTSF
LGAGAEAAPGTGKALGATVAAETARWKKVITDNKLKADQ
>AHV93150.1 serine racemase [Bordetella holmesii ATCC 51541]
MQNLPTYADVAAAAERLQGHAHRTPVATSRRLNQELGLELFIKCENLQRMGAFKFRGGFNALSRLNDAQRRAGVVAFSSG
NHAQAVALSASLLGIPATIIMPEDAPASKVAATKGYGGNVVFYNRYTEDREAISRKFSEEQGLTQIPPYDHPDVIAGQGT
AAKELFEEVGQLDALFVNLGGGGLLSGSLLSAKALSADCKVYGVEPEAGNDGQQSLRAGKVVHIDTPKTIADGAQTQHLG
QYTFEIIRRDVTDIVTVNDAQLVAEMRYLAQFLKLVAEPTGCLGLAAVRQAREQLAGKRVGVIISGGNVDMARFCELLRA
>AHV93151.1 his Kinase A domain protein [Bordetella holmesii ATCC 51541]
MPLPCNNGAIVTTPTFLRRGIVAWLLLSLAGIVLLGRYEYQSQRDHFLQGASIAHRMLSQKAVQHEAVLETLGALSHPPT
PERLLPSLRPALAELLGLGWPSPQGWQGSQPAPAGLEHAVERARTSGHAVVLPLDASHYWLVAPSSWSMLIDAKRLLAPA
DIADDVGTLTLNVSSNALALREQPASSGPLLSVAKILGSVSQPFPMLASRRVAPADWPWLAWVGWMLVSALLVGAGRYWQ
NSRRQARRQTEQARLAALSRLNTLGEMAAGIAHELNQPLTAILAQTRAAQRLMDDPDEASTVRQALEASAQQARRAADII
ERLRALVGSGAAAVRKPLVPDSLAGNLGFLCEPELARHQISLEWTNTAPATRALGDPIAVEQILHNLVQNAIAVLQTRSA
PRRIRLRGDVRDGHYQFSVSDNGPGIAAADFPHIFEPFYTTRADGMGLGLALCETLAGSMDARLTAANLPDGGACFTLSL
PLEPAA
>AHV93152.1 2OG-Fe(II) oxygenase superfamily protein [Bordetella holmesii ATCC 51541]
MLLHIPGVLEPAVAHQYLLDLLATEWEDGARTAGFQSTLVKHNRQLPPGNTVGQRIATHIEQQLLRHPLFISAALPTRIF
PMLFNRYGVGEAFGMHVDNAIRYPAGETRGLRTDLSATLFLRPPEDYEGGELVIQDTYGEHRVKLPAGDMVLYPSTSLHR
VTPVTQGERIAAFFWIQSLIRDDGQRTLLYELDGAIQDTANALGTGSPQAVALTGVYHNLLRRWAEP
>AHV93153.1 phosphoglycolate phosphatase, bacterial [Bordetella holmesii ATCC 51541]
MSALILFDFDGTLADTAPDLAAAANRQRTRRGLQPLPYDVLRPVASQGARGLLRVALDLKPGDDDYEATRLQFIADYTEG
STEQSRLFPGIADLLGHIRAQGLAWGIVTNKVTHLTLPIVEHLGLMRDSAVLVCGDTTAHAKPHPLPLLHAAEQAGFPTH
RCVYVGDDLRDIQSAHAAGMPAIAAAYGYVDAAEDIALWQAEARVDSPFALWDAIRPLLPRDPA
>AHV93154.1 flagellar biosynthetic protein FliR [Bordetella holmesii ATCC 51541]
MFNFTIEQLNGWIGQFVWPFIRILALVGASPLFAESAIPVKVKIGLSFMLAAAIALGLPPMPTVSPSSYEGLLLLGQQIL
IGVAMGLTMRVVFAAVQTAGEYVGLQMGLSFASFFDPSTGANTAVLSRFLNIVAMLVFLSLDGHLLMLAALVRSFDILPL
TPAMLDRNGLGVLLQWAGIVFVSGLLLSLPLVCALLTINLAMGILNRAAPQLTVFAVDFPIMLTVGLLVLAIVLPHAGPF
LEGLFERGLQAMSDVAQGFATP
>AHV93155.1 outer membrane autotransporter barrel domain protein [Bordetella holmesii ATCC 51541]
MRINSSETFSNNMSGSMGRYGLGVDARWNTAWAVYGEFNYGKGSKQESPYSGHVGVRYSF
>AHV93156.1 malate/L-lactate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MNHFFLALDPAAFRDAGSFEDEMDELIDTMHETPAADPQTPVLVPGDLEAAEALRRDIEGVPISRALDDKLRMICERSGA
RYVLGLRDDKDAS
>AHV93157.1 putative integrase/recombinase domain protein [Bordetella holmesii ATCC 51541]
MGTFRKRGKTWRAEISKAGIRESKSFDTKREAQEWVASRETEILTTAVGGIALQTVAQVLHRYSDEVSPRNKGHRCLFKL
PPVIASNLGAVLG
>AHV93158.1 outer membrane insertion C-terminal signal domain protein [Bordetella holmesii ATCC 51541]
MKFTIRNAAALSCLPLMSLMHVAQSVSATSVQLYGLIDVGVQPLTHGPNGASKTGMSSGNLNGSRWGMRGSEDLGGGTKA
VFTLESGFDPANGQSLQGSRLFGRQAYVGLSDRSLGTLTLGRHNTLMIDWMSKYNPFENANYGGKRIDAAFSDRMDNSIK
YINTFGGLSVGAYYSFGWNNDQSWTDTNTGRMIGAGLRYQTGGLDAAVLYHTKRADAPKAGADSSNREDRILGALSYDFG
LIKLYGGYRWLEQKLVQRDYVSRLYWAGARYQAAPATNLSLAIYHMQGTTCDNMNVASCPTAQGAGSDQKPTLLVLGAEY
DLSKRTTVYALSSYALNDNGSSVSVIGGKYGVNVQPGSNQLGVALGMRHRF
>AHV93159.1 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein [Bordetella holmesii ATCC 51541]
MSLADNTFLSVRNLGKRYGEHAALADVSLDIRAGEFVCLLGPSGCGKTTLLRAIAGLDMQDSGSIVLCGRDISQATPAER
DYGILFQSYALFPNMTVEQNVAYGLSGRRAHRQRVAARVVEMLDLVGLGAAARKYPGQLSGGQQQRVALTRALAPAPSLL
LLDEPMSALDARVRTHLRAELRALQRRLAITTLMVTHDQEEAMEMADRIAVMNGGRIEQFGTARDLYRQPATAFIADFVG
KANWLGYERVDASHVRVGRQLIEVSGVPAQERGRLFLRPEAVRLAEPQGLPMGNAFLAEVEDGVFLGSSYRLTLRLDGMP
GLSLQTVVSTEAGDALLDQHAAGRCWVELPRDALRAYA
>AHV93160.1 PP-loop family protein [Bordetella holmesii ATCC 51541]
MSTTDIEFRSPAEEKARHEGNKLSKRLARETTRALSDYNMIEEGDRVMVCLSGGKDSYAMLDILLALQKRAPFRFELIAV
NLDQKQPGFPPEILPNYLSALGVPFHIETQDTYSIVTRVVPEGKTMCSLCSRLRRGILYRVADELGATKIALGHHRDDIL
GTLFLNLFYGGKLKGMPPKLVSDDGRHTVIWPLAYVPETDLIAYAQLKQFPIIPCNLCGSQENLKRKEVTRMVQEWDKKF
PGRSWNVFNALSRVVPSHLMDRELFDFVGLRPTGVPDAGGDIAFDEPEDDDDQACGTPADDPASLAEQKIVFNRPV
>AHV93161.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MQPVDYATSDEFVSLYREHHGWLVQMLHRRLGGADAAADLAHDTFERVMRSRSRLAFAEPRGFLTTVAKRLLIDQSRRKA
IEQAYLETLAARADDVVASPEMHVLVVEALEAVCRMMEQLPARARQVFVLAQVEGLTYPEVSERLGVSVQAVQRDMVKAW
QHCYGVLYA
>AHV93162.1 rubrerythrin family protein [Bordetella holmesii ATCC 51541]
MISAIPLSRREGPLDALLVEVDRALQVLSRSAVAGRAYPARAAESGQTLSETEKRHAAGLMRVNHVGEVCAQALYRGQAA
VCRDANTRELLREAAAEEVDHLVWCDARLKELGSRPSLLNPLWYAGSFALGVAASVAGVPRNLGFMAETERQVEAHLEEH
LHTLPATDERSREIVRQMKEDEAGHRESAERAGGVPLPAPVRGIMRAMSKVMTTTAYHL
>AHV93163.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MEGTILAFGGLFAALAWRLRRTMRWTPKAGRAVALPRGYRWQVLARVLSAIVGGYAFSSVGATLLARTLAFSGMTSPAFG
VATASMLSFLIFTLTALWVFAAPRAWLWLLLASGSLALLVWLLERA
>AHV93164.1 hypothetical protein D560_1270 [Bordetella holmesii ATCC 51541]
MWIDAQAEVIFDAQGRVSALRQTWQFDEMFGAYATQGLPREGDGGLAASTRKSMAQDWMKALGEPISHYFTRVTHGGAPL
AFGAPVDSDVRWDGQRLSLSFTLPLKHPVAPGADGLSIDIFDPTYFVAYAFDAPQAWRLTDAPANCRQTYRPPQALDWKT
MQQLASIPSDVDTLPDELFAITKGLTHRNELRCS
>AHV93165.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MNSSILKQPAGAPRMGVCGAVWRRTATALVVPLLILAIWQWAGQSANMAGVLPTPVDVAKAWYAWAFGNPGMGLNPYQGT
WVSNVQYSTLRVAQGFVLAMLAAIPLGLAIGWSRLASRMLDPLIQGLRPIPITAWLPFSIALFGIRDMGSIFLIFLGGFY
AIVVNTTQGARDVDRNLVRAASMMGASPGQMLRRVVLPAAMPSIFTGLRIGLGISWTAVIVSEMVAVKSGLGYVLWDAYY
VGRMDIVLADMASIGLMGFLSDRLLVVIEHRVLAWRMLQNH
>AHV93166.1 multidrug efflux periplasmic linker BpeA domain protein [Bordetella holmesii ATCC 51541]
MVVKDGKVQQVAVSTSSSLNNQWIISSGLSAGDVVVVEGFQKIRPGAPVQTSPWNPNGKAAGAAGQPGATPADGQAPAKK
EPNS
>AHV93167.1 hypothetical protein D560_2647 [Bordetella holmesii ATCC 51541]
MHNRTFIALLIIVTLAFLWLLWPFFGAVFWGTILAIIFSPLHRKLARRMAPRTTLAALLSLGLVLLVVIIPLILITGSLV
QEGASLYERMHSGSLNFGTYFQQIMDAMPPIVHDLLARFDLNDLGSIQEKLSAGAMQLSQFVATQVVNIGQDTAQFLISF
GVMLYLLFFLLRDGSRLSRRLRRAVPMDEGYKQHLFRKFTTVVRATVKGNIAVAAAQGALGGIIFWVLGIQGALLWGVIM
GFLSLLPAVGAGLIWAPVAIYFLVTGAIWQGVVLILFSVLIIGMVDNVLRPILVGKDTKLPDYVILISTLGGMALFGLNG
FVIGPLIAALFVACWDLFSPPDPENLPKDADSLPAAEPRGKP
>AHV93168.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MRPFGFLVFYEELLAVWTRKLGCRDAARDLAHDAFVKCLEADSSKIEQPRAYLHQAARNAAIDNFRREGERQWLPLDTIA
GEPGTLGDPVAQARAQQLGQALEVALAELPLKCCQVFIWQRLEGLTQAEIAERMGLSKNMVEKYMIRTALHLRQRLGAYA
PN
>AHV93169.1 putative AcnD-accessory protein PrpF [Bordetella holmesii ATCC 51541]
MRGGTSKGVFFNREDLPESARVPGAARDALLMRVIGSPDPYGKQIDGMGAATSSTSKTVILSKSNRPGHDIDYLFGQVSI
DQPFVDWSGNCGNLSAAVGPFAITNGLVDAERVPANGVAVVRIWQANIGKTIVAHVPMTDGAVQETGDFELDGVTFPAAE
IQLEFMNPADDGDGGSMFPTGNVVDELDVPGVGRLRATMINSGIPTIFLEADALGYDGTELQDAINGDPSALARFETIRA
HGALRMGLITRIEDAATRQHTPKVAFVAPPKAYAASSGKQIARSDIDVLVRALSMGKLHHAMMGTASVAIATAAAVPGTL
VNLAAGGGQRDTVCFGHPSGTLRVGAQAESIDGEWTVTKAIMSRSARTLMDGYVHLPREGF
>AHV93170.1 catalase/peroxidase HPI [Bordetella holmesii ATCC 51541]
MSNEAKCPFKHTAGGGTTNQDWWPKRLRLELLSQHSEKSNPMDPGFDYAQAFKSLDLAAVKKDLADLMKDSQDWWPADFG
HYGPLFIRMAWHSAGTYRIGDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGNKISWADLLILTGNVALETM
GFKTFGYAGGREDTWEPDQDVYWGNERTWLGGDLRYGKQAGGKEEGTVVADEDLHGKESSRTDGERNLENPLAAVQMGLI
YVNPEGPDGNPDPMASARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPADHVGAEPEAADLENQGLGWKSSFRSGK
GGDTITSGLEVTWTSTPTRWSNNFFWNLFGYDWELTKSPAGAHQWIPKHGAGAGSIPDAHDPTKRHAPSMLTSDIALRVD
PAYEKIARRFFEHPDEFEEAFSRAWFKLTHRDMGPRARYLGPEVPTEELIWQDPIPVADHPLVDDKDVAELKQKVLASGL
SVSELVATAWASASTFRGSDKRGGANGARIRLAPQKDWAVNQPEQLAKVIKALEDIQADFNGKGGKKISLADLIVLAGCA
GVEQAAEKAGHKVTVPFAPGRMDASQEQTDVESFAAMEPLHDGFRNYLKGRYDIPAEHLLIDRAQLLTLTAPEMTVLIGG
LRVLDVRSGKDKHGVFTDRPGVLSNDFFRNLLDMGTEWKPQTPAREAFDGHDRKTGKAKWTASRVDLVFGANSQLRALAE
VYASDDANKKFVHDFVAAWNKVMNLDRFDLK
>AHV93171.1 transporter associated domain protein [Bordetella holmesii ATCC 51541]
MSDPYPAADSSASPHKPSKSLLDRVMSLVRREPEDREGIKAFVDAAHDRALIDAESYTMIKGALAVSERTVADIMVPRSR
MDLLDVSLPVPQLLAAIIETAHSRFPVYEDDRDNILGVLLAKDLLRYMQDPSIELRSLIRPAIFIPEAKRLNVLLREFRS
ARNHIAIVIDEHGGISGLVTMEDVLEQIVGDIEDEFDEDEEESIFPEGDNQWRMLAATDISYFNETFSTQMPDDEYDSVG
GWLGGKLGRIPRRGDTAEFAGLQFEVIRADPRRALWLRVRRAPQSLRPETNA
>AHV93172.1 hypothetical protein D560_3717 [Bordetella holmesii ATCC 51541]
MLQTLAAACSFQEDIKKSRFAAHAAPVASVAEAMAFVSAHSVADATHNCWAYRIGNAYRYNDDGEPGGTAGLSCKP
>AHV93173.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MEPNTVQLNDIALFVEVAKRKSFSLAARALHIPTSTLSRRIGQLERAIGLRLINRNTRRLELTDSGSTYLRRCQGLIDEA
RLAQEQLLSLSSKPKGRLSISMPYSLAIWLLPTSLRAFMDAYPDLECEFDLSMKSTADSQGEPFDIVLRFGRAGSDFQDD
NAVVVDEIIRLDNYLYASDEYLEQHGEPQSPADLIHHQCLRTAIDDAHSFWLLTHGKQTERIEISGHLAGNNISVMGTFA
GLGLGITRLPSCQALDPIIERHSLRRILPQWQVQPISIYGHFPQQILPAKTRAFMDFIQPQLGPADTLPVQTQQKPPADE
MDIDGSAQAGVMPSGSKRRNRAHTPDSSSH
>AHV93174.1 maleylacetoacetate isomerase [Bordetella holmesii ATCC 51541]
MQLYSYFRSSAAYRVRIALNIKGLSYAYSPVHLLKEDGQQLSEDYLALNPSALVPTLVDGDQAIGQSLAIIEYLDETHPQ
PALLPATPAARARVRAIALNIACDIHPLNNLRVLKYLKHDLKVEEEAKNAWYRHWVDTGLTALESMLSQSAETGRFCHGD
TPTLADICLVPQVFNARRFGCDLSAMPTILRIDEACNTLPAFQKAAPENQPDAE
>AHV93175.1 VIT family protein [Bordetella holmesii ATCC 51541]
MVSTASLIIGVAAAQASDQVILTSGMAALVAGALSMAAGEYVSVHSQADIEAADLRIEQRALRVNSAQELEELTGIYVER
DVAPEIARAVAEQLTRHNALDAHARDELGISIYNRAKPVQAALASAGAFASGAALPLAVAMAASAGLVIPAVSVASILGL
GVLGAIAARAGGRPSGGPRYE
>AHV93176.1 hypothetical protein D560_0175 [Bordetella holmesii ATCC 51541]
MRGRGHDDSVCCVPSWSTGYVGIAHPGVTIGSSLPIRSFL
>AHV93177.1 hypothetical protein D560_2778 [Bordetella holmesii ATCC 51541]
MFCAFSFEVQMARHSFQQGELAYWLQIVAEQGDKAQVPENFAEALVTLRCVERGPEGQLVITEKGRLALHMEGLGAIHRV
>AHV93178.1 superoxide dismutase [Bordetella holmesii ATCC 51541]
MLAAAGSVAAQTVDMYAAGPKGPEQKVGTIKIEQTKYGALLTPVLEGLPPGVHGFHLHDKASCDATTADGKPVAAGAAGG
HWDPDKSNSHKGPYDDSGHKGDLPAIYVMPDGKANYPVLAPRLKASEFKGHALMIHAGGDNHSDHPMPLGGGGARIICGV
VK
>AHV93179.1 radical SAM superfamily protein [Bordetella holmesii ATCC 51541]
MLPAGSALTSLPPLSVYVHVPWCVRKCPYCDFNSHAVPGKDIPERAYLDALRADLEQSLPLIWGRQVISVFIGGGTPSLL
SSAGLDELLAMLRACLNLWPDAEITMEANPGTAEAGRFMDYGASGVNRLSLGIQSFDDTQLRKLGRIHDANQARAAIDMA
QRAVPRVNLDLMFALPGQDLDACLDDVRQALGFGTEHLSMYHLTLEPNTVFAKYPPEVPDDDLSALMQDAVKATLGEAGL
ARYEVSAYARAGGRSKHNVNYWEFGDYLGLGPGAHGKLSFHDRIIRQARHRNPESWMAKAMAQDGSHIAESRQVGQQELP
FEFMLNALRLKDGVAASTFSERTGLSLAGIAHQLEAATQRGLLDADPTRLRATALGWRFLNDLQEIFL
>AHV93180.1 monofunctional biosynthetic peptidoglycan transglycosylase [Bordetella holmesii ATCC 51541]
MARPRSWFRIVTGAIMALLSLLLIYELAMFSMVVWYAYRDPGSSAIMRQELSRLRDANPKAELSYTWVPYDRINTTLKRA
VVASEDANFTEHDGVEWDAIRKAWEYNHEQQVEGRGKLRGGSTITQQLAKNLFLSSSRSYVRKGQELVLTYMIEHVMSKE
RILELYLNVAEWGIGVFGAEAAARHYYGTSAANLGASQSARLAAMLPNPRYYDKHRNTSYLNSRTATLLRRMRIVDIP
>AHV93181.1 putative exported protein [Bordetella holmesii ATCC 51541]
MRRRLLISLTLSLCLYAIGSQAQQSQPDPASLQQEVSLLQGKLKFELPGGFTASELPAGSAEEGTAGASGQLFVNNDARQ
VVVISEAPTPGGVAAADDDHVFLNGAAQGFVSQQKQASADYQPIDEDSLRSGELGLRRINAKGSFAGTPTLNTSLLAGSG
PRLVVVQIVSREDDPQGHAQLVQRVLESMPAKVAALRPR
>AHV93182.1 NUDIX domain protein [Bordetella holmesii ATCC 51541]
MNFIFRGDELLVSETGLGLPDASVCGALGIHPDSMQPLWHLQHTHYRSIHVARDLAAPDGYAFRKLRALLPELGEQAALA
GRAFQIAEWVRTHRFCGVCATPMQHATHELCLQCPNCGLHAYPRISPAMMVLIKRGDHILLARHARYATARYTALAGFVE
AGESIEDAVHREVAEGVGLKLRDLRYFGSQSWPFPHSLMIAFTAEYDGGEVQIQEDEISDAQWFGPGDVIPNIPMVQSIA
GRLVRANLPPGVHLVET
>AHV93183.1 bestrophin, RFP-TM, chloride channel family protein [Bordetella holmesii ATCC 51541]
MIVRPRPSALALLFILRGSVLPRIAGKLLFMIVAGCIIAAIHAAGYFNPGHLSAVPFSLFGLALSVFLGFRNNVCYDRWW
EARKQWGELIVQLRALSRETRVAWDTPLPVEDADVQRQIRRLIAFPHALAARLRQQSEIDAVRPWLDTGDLARLEGRRNV
PDALLGLVSQTYREALRAGRFGEVIYQGLMLRLAACGAVQAACERIRFTPTPFAYSLLLHRTAWIFCLLLPFGLVGTLGS
IMPLAVAIIAYTFFGLDALGDELEEPFGLDDNDLPLNAMARLTAIDLLESMGQTELPEPLVPQRYQLD
>AHV93184.1 hypothetical protein D560_2159 [Bordetella holmesii ATCC 51541]
MHLYPERLQGAGNNARSPHLFEPQFGVRVQIAAQGREFVMEKPYRFKRGACVHRTLQEPG
>AHV93185.1 glycine cleavage system T protein [Bordetella holmesii ATCC 51541]
MLNPQGGVIDDLIIYFFAPDSWRVVVNAGTAEKDIAWMARVAAVGNFTVRITPRRDLAMIAVQGPNARAKVWAARPGWQA
QTEGLTPFCAARLPEDTLVARTGYTGEDGFEIVLPASAAVALWQDLTAQGVRPCGLGARDTLRLEAGMNLYGQDMDELIH
PNQAGLTWTVSLKDTSRRFIGRDALEQFATPCAFLGLKLGERGVMRAHMPVRTPQGLGEITSGTMSPTLGVSIAFARLPQ
AVKPGDAVEVDIRGKWVPATVVKLPFVRNGKAVEHS
>AHV93186.1 hypothetical protein D560_0941 [Bordetella holmesii ATCC 51541]
MIHVGFSLTLTGHVPGNGEEDAAAPKNLNDLNKYFVTALL
>AHV93187.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQARGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRSYGYRDQEYFFLKIRSA
FPGIPR
>AHV93188.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MWVAKRRQKLPAGKADTLSLRLVDALNAGTVAGVFIGVAAFFLANRLLPTDLPKHELWESRAFFIAWAASLIYAFLRYRS
KWRDLLALAALAFLLVPVVNALTTSRHLGVSLPDADWVMAGFDLTCLATACLLAWIARRCARRKAVAPRKQRVAVEERAL
EGR
>AHV93189.1 hypothetical protein D560_2545 [Bordetella holmesii ATCC 51541]
MAWVLSTQVFDFAISLSLWPWFVGTMAGMAAAWGAVRWRCAECCARRL
>AHV93190.1 translation initiation factor IF-3 [Bordetella holmesii ATCC 51541]
MRLIGLEGEQLGIVKITYAFRLSEQADVDLVEIAPNAEPPVCRLMDYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPATD
DGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLTEVAQVEAMPKLEGRQMVMVLAPKKKASATK
ADAAS
>AHV93191.1 MTA/SAH nucleosidase [Bordetella holmesii ATCC 51541]
MGPTPDAKNAGHGYALAPHSKESIIAIGILAALADEIRDLIDAMAPGAQVHRIGMRDYHQGVLHGHECVIALTRVGKVAA
AATTATLLQRFRIGQVIFTGVAGGIHSGVRVGDVVIGAQALQHDMDARPLFPRYEVPLLGVTRLHADGQLSRRLAECAEH
FVQGRGSRVHCGLVATGDRFVGDAVTGADLRASLPDALCVEMEGAAVAQVCHEFGVPWALLRTISDHADSQADIDFLQFL
RDVASVYSAGILRRYLQTWPLAA
>AHV93192.1 hypothetical protein D560_2460 [Bordetella holmesii ATCC 51541]
MAEALALSEDSLDEGLSRDDWRAAFNEAQSAAEGAGWEGDFRGEPHVLMLPMAGRLAPGFVWKQDNAGLCFVVSPCPLPW
LHADQP
>AHV93193.1 ribosomal protein S1 [Bordetella holmesii ATCC 51541]
MSSVSTPAFGGESFADLFAESLKSQDMKSGEVISAEVVRVDHNFVVVNAGLKSEALIPLEEFLNDLGELEVQPGDFVSVA
IDSLENGYGDTILSRDRAKRLSAWLQLEKALENGELVTGTITGKVKGGLTVMTNGIRAFLPGSLVDLRPVKDTTPYEGKT
LEFKVIKLDRKRNNVVLSRRQVLEASMGEERQKLLETLHEGAVVKGVVKNITDYGAFVDLGGIDGLLHITDMAWRRVRHP
SEVLQVGQEVEAKVLKFDQEKSRVSLGVKQLGEDPWVGLARRYPQGTRLFGKVTNLTDYGAFVEVEAGIEGLVHVSEMDW
TNKNVDPRKVVTLGEEVEVMVLEIDEDRRRISLGMKQCRQNPWEEFATNFKRGDKVRGAIKSITDFGVFVGLPGGIDGLV
HLSDLSWTETGEEAVRNFKKGDELEAVVLGIDTEKERISLGIKQLEGDPFNNFVATYDKGAVVPGTIKSVEPKGAVVTLS
VDVEGYLRASEISSGRVEDATTVLTAGANIEAMIINIDRKARSVQLSVKARDSAETAETIQRMSDASASSGTTNLGALLK
AKLDQQRNDG
>AHV93194.1 hypothetical protein D560_0091 [Bordetella holmesii ATCC 51541]
MTAINLPHILAEVRQAFDRYEHALVNNDIAVLDELFWNSPHTVRLGASEHLYGYDAIQAFRRQRNAAGLQREVLRTQVTT
YGEDFATTHLEFTRGAAIGRQSQTWMRTPDGWRVIAAHVSQMT
>AHV93195.1 electron transfer flavodomain protein [Bordetella holmesii ATCC 51541]
MKVLVPVKRVVDYNVKVRVKSDQTGVDIANVKMSMNPFDEIAVEEATRLKEKGSVAEVIAVSCGAAQCQETLRTAMAIGA
DRGVLVQTDAELQPLAVAKMLKALVDKEAPQLVILGKQAIDDDANQTGQMLAALLDWPQATFASKVELGEGKVTVTREVD
GGLETLTLKLPAIVTTDLRLNEPRYVTLPNIMKAKKKPLDTVTPQDLGVDPAPRLKTLKVTEPAARKAGIKVADVAALVD
KLKNEAKVI
>AHV93196.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPTKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV93197.1 AAA domain protein [Bordetella holmesii ATCC 51541]
MRLRQELAATRIRYSLPPDVVLSLGESILRDEGEALLSAATELRLPGLGTLSIEPGGRDLPTLQRELAQAQASLSKGLQA
LGLETLAQGEARLALAEELQRELAQVRAALAAQAPEGLAARRAELAEVTSTRAQLQARLSVEAPAADLEQKLAAAADTLQ
RCQASCEAATQLARKADAVQIEAQGRAGLLREQADSRQAAFDTENQAARRAARAVQFTQAEQREQDCRRRVEHAEAALAE
HRPEQVRQDAERYARSAELARQAQQDRHARLLQLQGKLEQAGAQGVGERLAATEAEWQRAGRLREDYARRAAALDLLWRL
LDEQRETATRRLLQPLAERLAHYLGLLFPGADLRLDEQLLPVALARGGIEDALAALSFGTREQLGLLARLAYADLLQQAG
RPTLLVLDDALVHSDDSRRERVKRALFDAATRHQILLFTCHAQAWQDMGVPVRQLDAFTP
>AHV93198.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MSATPSFNWEDPLLLDQQLTEEERMVRDAAQAYAQDKLATRVLEAFRHEKTDPAIFAEMGELGLLGATIPAEYGGAGLNY
VSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGSEEQKRKYLPKLSAGEWIGCFGLTEPNHGSDPAGMETRAVKIDG
GYKVSGAKMWITNSPIADVFVVWAKCVGGEFDGKIRGFILEKGMKGLSAPAIHGKVGLRASITGEIVMDEVEISDAQMMP
GVSGLRGPFTCLNSARFGIAWGALGAAEACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKD
EGTAAVEITSIMKRNSCGKALDVARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAQTGIQSFF
>AHV93199.1 cytochrome c family protein [Bordetella holmesii ATCC 51541]
MKRVLSRMVVASGLMLGLSITTISFAADGPAGPAKPDAAKGAQLFDQGDATRGIIACATCHGAAGNSTIPANPNLAAQPH
EYLAKQLHDFQVQQGAKLPLRKGPQGAPTPMTAMSQALTPADIQNLALYLAQQPLKEPATAGYKNLVEHGQRLWRAGAAE
RGLPACAACHSPNGAGLPAQYPRLSGQFPAYIEEQLKLFRSGDRANSAPMHDIAARMTDDDIKAVADYAAGLR
>AHV93200.1 helix-hairpin-helix motif family protein [Bordetella holmesii ATCC 51541]
MPGLVLIDGGKGQVEVARQVFAELGLDIAALVGVAKGEGRKVGLETLVFADSRAPIALGKESAALMLIAQVRDEAHRFAI
TGMRAKRAKARNISRLEEIEGIGAKRRQRLLARFGGLSGVTSASVEDLASVEGISEELAQRIYDALHG
>AHV93201.1 HTH-like domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGHSLWPPIPLFDYRR
>AHV93202.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [Bordetella holmesii ATCC 51541]
MTLDLQTTIEKAWEARANLSPSDASAEVRDAVEHTIAALDHGRLRVADKSSGEWVVHQWIKKAVLLSFRLQDNDVMGQAP
LTFYDKVPTKFAEYGAAAFKAGGYRVVPPAVARRGAFIGKNVILMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLS
GGVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVVVEENSVLAMGVFLSQSTKIFDRATGTITYGRVPSGSVVVPGSLP
SADGSHSLACAVIVKRVDAQTRAKTSINDLLRA
>AHV93203.1 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase [Bordetella holmesii ATCC 51541]
MLNVVILAAGLGKRMQSDLPKVLHTLAGRPMLSHVLDSARQLDPARIIVVVGHRAERVEAAYAAEAGLSFALQRPQQGTG
HAVQQAVPQLVDGDGADDATLVLYGDVPLVQPETLRRLMQARGQGVAVLTEVLADATGYGRIVRDAQGQIARIVEHKDAS
EQERAIQEVNTGILIAPTAKLKDWLARIDNKNAQGEYYLTDIIGLAVAEGVPVHAAHPGANWETLGVNSRVQQAELERRW
QQELARRQLDAGVTLADPARFDQRGALECGRDVYIDVGCVFEGKVTLGDGVRVGPHCVLRDVQIAAGTQIDAFSHLQQAK
VGADGRLGPYARLRPGPIWRPGCTSAILSRSRMRCWAKVARPIIWPISVTPISARASTSAPAPSPAITMA
>AHV93204.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MLREFRTFVAVARDGTFTGAGRQLGLTQSAVSAQIRRLENHLGVTLFDRSAKAAALNAQGRALLPQAEELLELADGMVKQ
GGGRVSGVLRIGAIASVQQDLLVRALKPFRAAYPDVRVRVVPGVSLSLLGQVDAGEVDLVVQIRPPFALPPELAWQALLS
EPMVLAVKDTMPLRPWRDLLETEPFIRYERSSFGGRLVDRFLRRHRIEVQEAVELDEIDALANLVRAGLGVAILPHTRWL
NRTGLRLIELGEPDFVREIGLIGRLSRSAILEKMGVCLQQASAEQAGPAGPAATPVKGDRNVP
>AHV93205.1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MPAHLVPLVEVVLCEASDAAAADALFGFMQRCGMVPVRVARDLPGFLANRLQHALSREAFALIDQGIASPEDVDNAVRFG
FGFRFLAAGPVLQRDHAGIDVHAAAGATMYPTFCNDDHPARCLTERAADGRHGMKAGAGFYDWTPEAIATERQRYDKLLR
AGLALLSNELPEIEP
>AHV93206.1 glycine--tRNA ligase, alpha subunit [Bordetella holmesii ATCC 51541]
MLTFQQIILTLQEYWDKQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPPEILDLYIGSLKALGINPAEHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCTPTTGEITY
GLERLAMYLQGVESVYDLVWTEGANGRRVLYRDVFHQNEVEQSTYNFEHSSAEMLFAHFNDYEAEAKRLMDVPLALPAYE
AALKAAHTFNMLDARGAISVTERAAYIGRIRNLSRAVAQAYYDSRERLGFPMLGGSAPAGEAA
>AHV93207.1 carbamoyl-phosphate synthase L chain, ATP binding domain protein [Bordetella holmesii ATCC 51541]
MPRFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNQKTTDREKLQVELGEPGPERIWYVGDAF
AQGFTLDEVHNITHIDPWFLAQIKEIVDIELALEQKTLSDLDYATLFELKRRGFSDRRLAFLLDSSESEVRKLRHQLNVR
PVYKRVDTCAAEFATRTAYMYSTYEEECEAQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNCNPE
TVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLARALEANGVPIIGTSPESIDVAEDRERFQKLLNK
LGLRQPPNRTARTEAEALAHAAEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMRAAVKVSNDSPVLLDHFLNNATEVDV
DCLADGETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSADIVAEIKRQTTTMARALNVSGLMNVQFAVQDGDVYVLEVNP
RASRTVPYVSKATGLQLAKIAARAMAGRTLAQQGVTEEVVPAYFCVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRSF
GEAFVKSQLAAGVRLPESGTVFISVKNQDKPRAVEVARGLHNLGIKLVATRGTAAEIEAAGIPVQVVNKVTEGRPHIVDM
VKNGEVSLVINTVEERRNAIADSRTIRTQALANRITFYTTIAGARAAVEGMQFLREGLGFQVYPLQDLHASLHQ
>AHV93208.1 GTP-binding protein HflX [Bordetella holmesii ATCC 51541]
MRALIISVDLGDPDHQAHADEFLMLAEGAGAEIVGTLNARRDRPDAKYFIGSGKVEEGVALAGAALADIVLFDQPLSPAQ
QRNLEREFNLRVVDRVALILDIFALRAKSHEGKLQVELAQLQHLSTRLTRMWSHLERQRGGIGMRGPGESQLEMDRRMIG
AKVKMLRERLDRVERQRVTQRRARARGGALSVSLVGYTNAGKSTLFNSLTRAGAYAADQLFATLDTTTRRIWIEGAGSVV
LSDTVGFIRDLPPNLIAAFRATLEETVHADLLLHVVDAASPQRDEQVFEVNKVLAEIGAAEVPTILVYNKIDRAGLEPRV
ERDAHGTIARVFVSATERAGLDALRGAIAEISQIAGNNASNHQTLQSE
>AHV93209.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MKAYQGHASLADPHGSLVTWTAIEKGGFIVDASGRRFGDESMGYSAFAAVELQRAGPFWVIADTHVRDVTAAGQQEYAEL
VSHGGVLSGSAQELCARCGIEASGFKATLAAARASAAGAPDPFGRDQWGLGPWGQC
>AHV93210.1 asparaginase family protein [Bordetella holmesii ATCC 51541]
MPERSWPRVEIAYACVDMDGRLIDFMATYAQGIVLAGVGDGNATADAILALDRAVAAGLVVVRATRTGSGRVARNIEVDD
DGHGTLAAGELSPQKARILLTLGLMQSQDPVALQQLFNHYGQAREHIYAKAVPLV
>AHV93211.1 flagellar hook-length control FliK family protein [Bordetella holmesii ATCC 51541]
MMMNPPSLALTIPTVAPSAAPAGVPAPTTGDDSDSFARVLNAQKASGSDQAASVTRPRNNDRPQAMPSDRADTAPACASR
PAAQDDDTSDSPHAGSTQDNSDIAAALGQGALPLPAAPALPQQTLELAAQVAEVQARVAAANTASSEGADTQIEHTLAAR
TLGATAAEPAAAAKPAATRMPSHAKGSSDDEQQGAQDVAAVRPVPNMALTAEAVSPVQPRPQAQTSSKPPAPETSPAAPL
HAVTDAAQAWAELSPARLPVATATADVTTGLQLSSPVGATQWGQELSRQVVIFSENLAQGSHTAQLRLDPPDLGPLRVTL
SINDGVASASFVSAHAAVRQAVETALPQLQQALSQAGISLGHTNVGDQGTPAMAGQAGGQSSGQPGHHGQAKDGRQALGA
VVIESAAALRTQAHEGLVNTYA
>AHV93212.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93213.1 homogentisate 1,2-dioxygenase [Bordetella holmesii ATCC 51541]
MSLQYQSGFGNACATEALPGALPVGRNSPQQCPYGLYAEQLSGTAFTAPRGENRRSWLYRIRPGVVHRPFLPYEGARTWL
GDFGHGPVTPNQLRWSPLPLPAEPTDFIDGVHTWGGNGSPDEQNGVGIHLYAANQSMQGRFFYNADAELLLVPQEGRLHL
ATEMGLIELAPLEIAVIPRGVRFRVELPDGQARGYLLENFGTALRLPELGPIGSNCLANARDFLAPVAWYEDVEGDVELI
AKFSGGFWRAPWTHSPLDVVAWHGTHTPYKYDLRNFNTVGSISFDHPDPSIFTVLTSPSDTPGTANLDFAIFPPRILTME
NTFRPPWFHRNIASEFMGLIQGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASAADTRQPHYIRDTMAFMFETRRVI
RPTQQALQSPQLQGDYYQCWQGLKKHFNPERA
>AHV93214.1 ribosomal protein S18 [Bordetella holmesii ATCC 51541]
MAFFGKRKEKRKFTQQNPLFKRRKFCRFTAAGVEEIDYKDLDTLRDFVQENGKIIPARLTGTRAIYQRQLDSAIKRARFL
ALLPYTDNHN
>AHV93215.1 integral membrane sensor hybrid histidine kinase domain protein [Bordetella holmesii ATCC 51541]
MAKWGLRKKSFMALLLACIVMLAPAILITWFVFDGVRDHFGRAFAENFTQLSRQRILAPVSREMALSTRLANSEVTRRWL
HNENDPAARELFFREAEGYRRDFMGHAYFIASADSGNCYYSDATGQSDLPRYTLSRDATDDGWFYASLKSPDSYNINVNP
DLKIKTTKVWINVQIRDGDQVLGLSGAGLDVGAFCANSSTAAEPGSHLSSLMNKAPYKPTRTPRASPTTRARRGRPRSTA
RSSACSMQAIAAAISRRPCSRPRRSPTAWP
>AHV93216.1 ribosomal protein L28 [Bordetella holmesii ATCC 51541]
MVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVTAKAIRTIDKNGIDAVLADLRARGEVA
>AHV93217.1 ribonucleoside-diphosphate reductase, alpha subunit [Bordetella holmesii ATCC 51541]
MQTSIASVTRPTAVPPESNEHQANTGQAGQWASYNIIRRNGSVVGFEPGKIAIAMTKAFLAVNGGQGAASARVRELVEQL
TVQVVSALVRNRPSGGTFHIEDVQDQVELSLMRSGQHDVARSYVLYRERRAQERAAAADLQEKSAPDAQESTLSVNDGGV
RRPLDMAQLRATIEAAGVGLTEFIDTETILKETVKNLYDGVPVDEVFKSAILAARALVEKDPAYSQVTARLLLHTIRKEV
LGQEVSQADMGQRYADYFPTFIQRGIEAGLLDAKLAEFDLARIARALDASRDLKFGYLGLQTLYDRYFLHVRGTRIELPQ
VFFMRVAMGLALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDDLEGIYDAIKENALLAKYAG
GLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGGKRKGAVCTYLETWHLDIEEFLELRKNTGDERRRTHD
MNTANWIPDMFMKRVMEGGDWTLFSPSDCPDLHDKYGREFERAYLGYEAKAASGELKLFKKMPALSLWRKMLSMLFETGH
PWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIAVCNLGSVNLVAHMKPTANGSFELDHDKIKRTVSIAMRMLD
NVIDINYYAVEKARNSNMRHRPVGMGIMGFQDCLHMMRVPYASQAAIEFADRSMETVCYQAYWASSTLAEERGRYQSYEG
SLWSRGILPQDSIAMLREERGGNVDVDESSALDWNTLRARIKEHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVK
SNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPAELRELYATAFEVEPSWLVECAARRQKWIDQAQS
LNIYMAGASGKKLDDTYKLAWQRGLKTTYYLRTMGATSAEKSTGRGGELNAVSAGNHNASASASAAPVLPEPEIVGAVCT
MRPGDPGFEECEACQ
>AHV93218.1 copper-translocating P-type ATPase [Bordetella holmesii ATCC 51541]
MSTPTHDDRPAACCSHRDDAHAAGHHEHDHGHTHAHGHEHASRRADFPDPTGLQAGDGQELSRLRIGQMDCPTEETLIRK
KLGGMPQVHALEFNLMQRVLTVVHADGSRDAVIEAISSLGMTPEPVGTTASPQSAKHTAWRLLAAGGMLAALAEAAHFAS
LPIWLTALLAVVSIAASGLGTYRKGWIAVRNGNLNINALMSIAVTGAVLIGQWPEAAMVMFLFNVAELIEARALDRARNA
VRGLMDLAPQTAHRRNPDGSWSDVPAATLRIGDAVRVRPGERIAADGTLIDGGSAVNQAPITGESLPVEKTVGDPVYAGT
INADGGFDYRVTAAAGNTTLDRIIHAVEQAQGARAPTQRFIDTFSRVYTPTVVGLAVLVAVVPPLALGHTWIDSLYRALA
LLIIACPCALVISTPVSVVSGLTAAARRGILIKGGVYLENGRRLRWLALDKTGTLTRGKPVQTDMQILQPATTGGLSPQR
VAASLAARSDHPVSRALALAYTPADFLPVSDFKALAGRGVAGRIDGTDFYLGNRRLMRELNVLDAGVEARIDALEAAGKT
ANVLTDGRHVLALAAVADTLKPTSAEAIADLHSLGVRTLMLTGDNTRAAQAVAREAGIDEVHGDMLPEDKLARVEAKAGG
PGLVGMVGDGINDAPALARADIGFAMGAAGTGTAIETADVALMDDDLRKIGSFVRLSRATHRVLMQNIVLALGIKVVFLA
LAVTGNATLWMAVFADVGASLLVVANGLRLLRAARAR
>AHV93219.1 ribosomal RNA large subunit methyltransferase N [Bordetella holmesii ATCC 51541]
MDNAESINLLGMDAKALADLVGQWGGKPFRARQLQRWIHQRGVDSFDAMSDLARDFRAQLTERCVIEALPVNIEQRSADG
TRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLKTSEIIGQLWWAKRVLEADVGSARLAQ
ASGEDTRVISNVVMMGMGEPLLNYDQVLPALRMMLDDNGYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDAL
RDDLVPLNKKYPLKELLAACERYLAHAPRDFITFEYCMLDGINDTDQHARELIQLARQVRCKLNLIPFNPFPASGLKRSP
APRVRVFAQRLMDAGIITTVRKTRGDDIDAACGQLAGEVKDRTRITERNAAARSIPIRQVHA
>AHV93220.1 ergothioneine biosynthesis EgtB family protein [Bordetella holmesii ATCC 51541]
MMSARPFAASNVTCALTHPHSVAAPADAAARLLQMRAMTEALAAPLTAEDCQAQSMPDCSPVKWHLAHTTWFFETFVLAR
HDPRYRARHPQYRVLFNSYYQAVGDRHPRPQRGLLTRPSLKEVLDYRHEVEHAVANLLTQHPGDDALHQIVELGINHEEQ
HQELILTDLKHLLSCNPALPAYLPAAGLTLPPATPTGWTRYAGGQTRIGHSGDGFAFDNECPAHDVLLPSFHLANRLVTQ
YEYLQFMLDGGYRRPDLWLSQGWDTVCAQGWRAPLYWQGQQDEWQAFTLAGLQPLDLQAPVCHVSYFEADAYARWSRVRL
PREAEWELAALRHPAATANLLESGHYAPCPAPRPGVAGGPVQLIGDVWEWTASAYDAYPGFHAAAGAIGEYNGKFMCNQY
VLRGGSCVTPQRHIRNTYRNFFPPEARWQFSGIRLARDN
>AHV93221.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MSQRTAPLAGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAAGQNTSEAAYYLSANRNKFSV
ALDIASARGAELVRELAKQCDIVVENFKVGGLRKYGLDYESLKAINPRIIYCSITGFGQTGPYASRPGYDFMIQGMGGLM
SITGERDDLPGGGPQKAGVAVADLMTGMYSTVGILAAVIERERSGLGQHIDMALLDCQVAMLANQNLNFMTSGQAPQRAG
NAHQNLVPYQVFAAADGHLIVAVGNDGQFRNYCRVLGLPELAADPRFSTNPQRVRNRETLVPLLVERMATGARDTWLAEL
EAAGVPAGPINTLDQVYEDPHVQARGMKRELPHALAGTVPIAASPLKFSDTPIEYRRPAPMLGEHTRQILSERLGLSDED
IQALAVGPSA
>AHV93222.1 ring hydroxylating alpha subunit family protein [Bordetella holmesii ATCC 51541]
MKDLDVLFRRPEFDFSDYVLDHVEVHRCNYNWKTFIEVYLEDYHVGPFHPGLGRFVTCADLSWEFGAQYSLQKVGVHDSL
EQPGTEVYRGWHDNLMRYRGGRTPDFGAIWVTYFPPT
>AHV93223.1 hypothetical protein D560_1495 [Bordetella holmesii ATCC 51541]
MFNNASVSRGDCLANDPKGMVYLGATGPYGYDCPGFCYGCGVMRGANAGVHTSFQRSLLA
>AHV93224.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTARRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFAFKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93225.1 acyl-CoA dehydrogenase domain protein [Bordetella holmesii ATCC 51541]
MQPFATHQVTNQVAPLEDYSLFDTDQALKQWLVRLGIPTVELAEHGAWLGRAHTLKAGELANTHPPALHTYDPAGHRIDH
VEFHPAWDALMRGA
>AHV93226.1 3' exoribonuclease, domain 1 family protein [Bordetella holmesii ATCC 51541]
MFNKVTKTFQYGQHTVVLETGEIARQASGAVLVSVEDTVVLATVVAAKKAKPGQTFFPLTVDYIEKTYAAGRIPGGFFKR
EGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSVNPEIDPDIPAMIGASAALAISGIPFNGPSALPAWAMSTAN
TCSTRRPRSSRPPRWIWWLPVRKTPC
>AHV93227.1 S1 RNA binding domain protein [Bordetella holmesii ATCC 51541]
MSETSALTNAAPGVDHARIIEQIATELSVRASQVAAAVDLLDDGATVPFIARYRKEATGGLDDGALRTLEVRLSYLRELE
ERRLAILDSIQQQGKLTPELQQEIATADTKQRLEDLYAPYKPKRRTRAQIAREAGLEPLADAILAEVGCDPAALAAQYLN
PEANINDAKAALDGARDILAERFAENADLLATMRDHIWSTGLLYSKMVEGKEAEGANFRDWFDFNEALRTLPSHRVLALM
RGRQQGVLELRVGLQQDLEAQAPHPCVARIAGFLKLGSDLFALDARPRERWLGEVCRWTWRVKLLTAFETEFFGRLREQA
EAEAIRVFAANLKDLLLAAPAGPKTVLGLDPGIRTGCKIAVIDRTGKVVDTSTVYPFEPRMDRKGTIHTLAALCAKHKVE
LIAIGNGTASRESEKLVADMMDQFSELSLTRVVVSEAGASVYSASEVAALEFPDLDVTLRGAVSIARRLQDPLAELVKID
PKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVDVNTASAALLARVSGLNNSLAKNIVSWRDENGAFPTRDMLRKVPR
FGDKAFEQAAGFLRIQDGENPLDASAVHPEAYPVVERIVARIKADVRQIIGQREALKGVSPTDFTDERFGLPTVRDIFSE
LEKPGRDPRPEFKTAQFKEGVETLNDLHPGMTLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQTV
TVKVLEVDVPRKRVALTMRLNDPAEPRRAAAPRTDRQPTANPGQRGVPRRNDGGGPRSSSLANSAMADAFAKLKR
>AHV93228.1 DEAD/DEAH box helicase family protein [Bordetella holmesii ATCC 51541]
MKLTVAVRTLCEFSARVGDLDLRFTPAPSAQEGMAGYTAIAERRADTYESEVFLSGEHGALTVRGRADGFDASLGRLEEI
KTYRGELSAMGANQRALHWAQAHIYGHLMCQARNLAGLSLALIYVDVQTLDETALTEWQDAPALADYFGQACERYLLWAQ
RQAQHRFARDAALDAMRFPHGDFRPGQRELAVAVFRAARDGRALLAQAPTGIGKTLGVLFPALKACAAQGLDKVFFLTAK
SSGRGLAVSALDQLPPGLRTVELLARDKACVHPDRHCHGESCPLARGFYDRLPAARDALEAGGDYSQPVLARTAREHELC
PYFLNQEMARWADVVIGDYNYYYDANGQLYQLSQACQWRVVVLVDEAHNLVERARAMYSASLRLSGLMAARRAPSPACAS
GWIEALLAVADTKKRCRV
>AHV93229.1 ubiquinol oxidase, subunit II [Bordetella holmesii ATCC 51541]
MLLSPSGDIAVQQRNLILISTGLMLIVIVPVIVLTLWFAWRYRANNTSAAYTPEWNHSTVLELLIWAGPLLIIIALGALT
WVSTHQLDPYRPLSRLSEGHDIPPDTKPLVVEVVALDWKWLFVYPEQGVAAVNELAAPVNRPIQFRITSSTVMNSFFIPA
MAGQIYAMPGMQTTLHAVINHPGEYAGLSANYSGAGFSGMHFAFHGVDEAGFQQWISRVRDQGHTLDRQTYLQLERPSER
NPVQYFGSVTPGLFDAIVEQCVDPARPCRMNHARAKGALNLNTAGQSYLGAICRSEQDLAL
>AHV93230.1 hypothetical protein D560_3269 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSHPAS
>AHV93231.1 sigma-54 interaction domain protein [Bordetella holmesii ATCC 51541]
MRVGSARVFFLLSMSNDLFASDPPHRPYVPLAERLRPRTLSDVVGQSHLLGPDKPLRVAFDSGRPHSMIFWGPPGVGKTT
LARLMADGFDAQFIAISAVLGGVKDIRDAVVTAQVAQGQGRRTILFVDEVHRFNKSQQDAFLPYVESGLFTFIGATTENP
SFEVNSALLSRARVYVLQSLSAEELMQLVDRAVAALNEGLEDGQQIRFETEAREQLAAWADGDARRLISAVEVVAESAQA
AGRDSVDAAWLETSLSQNLRRFDKGGDAFYDQISALHKSVRGSDPDAALYWLARMLDGGADPKYLARRLVRMAIEDIGLA
DPRATELAVNGADIYERLGSPEGELALAQAVVYMACAAKSNAVYNAYNAARKFAAEHGSAPVPLHLRNAPTKLMKQLGHG
KAYRYAHDQPHAYAADEQYFPDGLNPTFYRPTDRGWKLKSSRSWHSWMSLTPRNAPGNGSGATAAAVNANPY
>AHV93232.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MVSDPQAYSVATFTRAALPMGTQAMLKPAGSEPFPFKRIEFKAVGWSEDKPELKAGQETAYINDDNDGTLRQIRRTSLNG
LTASQTFELQYHGLASLASQNADPARSLAYPPTFARAPKSWSSLAQVTENGEYRFEAREGTKDPFDMGTPWRRVCVTGKA
YDASQVLAELPGKAIEMVCTDSNQNGVTLREVKYAWVSDLGLPLVRAVRTTRSSFKYEYQGVKIDK
>AHV93233.1 hypothetical protein D560_0515 [Bordetella holmesii ATCC 51541]
MKTLQLDVTATAAQGDASRIDATLDLNTEKMGHLTATATTQLKGLALEPRQPIRADLSADIADLTWLSLFVGDTLEVGGA
LRAQARVDGSLAGGWNANGTIDGDKLRVVRIDDGVRLVDGTLRARLVGDRLVLDSLRFPAVLRVMPDEWRTKEWITTNPQ
AKGGYAEAKGEWNLTSMAGRIGVTLYRFPALQRSDRYAMVSGRVDIDIALPRITIDGDITADAGWVSLEILQGVPSLDDD
VRVVRPGQDQKAGTPIQVQMDLKVDMGPRFYITGMGLEAGLVGNMQILMQGGRLTGLGALHTRAGGIEAYGQRLRLRRGT
LTFQGRLDNPILDIVALRTGEAVEAGVRVTGTAQRPRIDLVSYPDVSDVEKLSWLVLGRGPDAGGGDTALLLSIGTALLG
GGEPLYKQFGLDDVSMRTGAIGSSGSLLPDRTVASSVNRDADADLATQFLVASKNFANGITLSVEQAMAGSETVGRASYR
LAQGLSLDLKGGSVNGIELIYRWVVGE
>AHV93234.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MTQPDPVIDVQGLTKRFGDKLVVEQVSLQVGRGEIYGFLGPNGSGKTTCIRMMCGLLTPDAGSGTCLGYDILRDSGSIKR
HVGYMTQRFSYWEDLTIRENLDFVARIYDMPRRRQAVDHALEQLRLQGRANQLAGSLSGGWKQRLALAACLLHEPQLLLL
DEPTAGVDPTARRDFWEELHSLAAQGISVLVSTHYMDEAERCHKLAYLAYGRMLAQGTAESITAGQQLQTWAVRGADLVP
LGQWLRGQPGVAQTVAFGNALHVSGQLGGPLEQTLRDAVHRRGLTIAPVPTSLEDVFIYLMSRASDNFGSQP
>AHV93235.1 lipo, YaeC family protein [Bordetella holmesii ATCC 51541]
MSNTFLKSLATLALGAAVLAQPALAQNKPLKIGVTAGPHAQIFEVVKEEAAKQGLQLQVIEFTDYVQPNVALATGDLDAN
SYQHQPYLDNANADRKYGLASVAKTVIFPIGIYSKKIKSLDQLPNGARIGIPNDPTNGGRALLLLQSKGLIKLRPEAGLK
ATPIDVIENPKKLRFIELDAAQLPRSLDDTDASAVNTNFALEAGLDPAKDAIAQEAPDSPYANVLVVRGADKDRPEIKKL
VSVYQSDATKQFILKKYKGAVIPAW
>AHV93236.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein [Bordetella holmesii ATCC 51541]
MTITLAHYLVLGAILFAIGIFGIFLNRRNLIILLMSIELVLLAVNMNFVAFSSWFGDTAGQVFVFFILTVAAAEAAIGLA
ILVLLFRNLNTINVDELDRLKG
>AHV93237.1 bacterial transferase hexapeptide family protein [Bordetella holmesii ATCC 51541]
MSKDLTQAHWNLDGIVSGLRAARVAWRRPRGRLREAASGGREFPSQESLQEIIKQLSGALFPMRLGPLDLREEVEDFYVG
HTIGAALDALLHQVCLELEHLGRDDPRPRDETLARGVEIVRAFGAALPEVRAALDLDVTAAYQGDPAARSVDEVLLCYPG
VTAMIHHRLANVLYRLGAPMLARIVAEIAHADTGIDIHPGATIGRSFFIDHGTGVVIGETAIIGDRVRLYQMVTLGAKRF
PPGENGELKKGLPRHPIIEDDVVIYAGATILGRITIGKGSTIGGNVWLTRSIAPHSNVTQAGLISDMPNCGLGG
>AHV93238.1 ATP-dependent DNA helicase RecQ [Bordetella holmesii ATCC 51541]
MSDPRALGVLQRVFGYESFRGDQQAIVDHVIQGGDALVLMPTGGGKSLCYQVPALVREGTGIVVSPLIALMQDQVDALTE
LGVRAAFLNSTQEWQQVREVERAFVAGELDLLYVAPERLLTDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSM
LHERWPEVPRIALTATATAATRTEIAQRLALDQARHYVASFDRPNIRYRIVEKNEVRKQLLDLIRSEHEGDSGVVYCLSR
ARVEETAEFLCNQGVHALPYHAGLSAQVRATNQSRFLREDGVVMVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGR
AGRDGLPATAWLAYGLQDVVQQRRMIDESPGDESYRRRLGQQLDAMLGLCETVECRRVRLLAYFGQSISACGNCDVCLEP
PEAWDGTVAAQKALSAIYRLGKERGQRYGAGHIVDILRGKSSDRTRQHDHESLSVFGVGADLSETAWRGVLRQLLAKGLL
MVDHEGYGTLALTEDSRAVLRGEVQLMLRRESEKKPRTRTSTRAKAPVIDLPTDRMPVFEALRSWRAEVARNHGVPAYVI
FHDATLREIALAMPDTQEDLGHVSGVGARKLEAYGEEVLRCVARPR
>AHV93239.1 transposase IS66 family protein [Bordetella holmesii ATCC 51541]
MSTASLDHLDAQQLRALAERLMGEVAARDAQIAAHDAVVAERDRVLHFKQTHIDQLMQELALYKRWRYGKRSEQLSPAQA
SLLEETMDADMAAIEEEVNALREAISTKPAPSQAPRRMRLPAELPRTDIHHEPASTTCRCGCGLKRIGEDVSEKLDYLPG
VFTVERHIRGKWVCEHCETLTQVPVPAQVIDKGIPTAGLLAQVLVAKFADHLPLYRQEGIFARAGLALPRSTLGEWVGVC
GLRLQPLVDALKAEVLGKPVLHADETPVQMLNPGAGKTHRAYLWAYTPTSFDSLRAVLYDFAPSRAGEHCRTFLQDWRGK
LVTDDYVGYKAGFAAGIKELGRMAHARRKFHDLHASHQSQIAGEALDLFGALYGVERDVADLPADKRRRIRQDRARPIAE
TLHRWLIAQRQRVPDGSGTARAIDYSLKRWEALTRYLDDGDAPIDNNWVENQIRPWAIGRSNWLFAGSLHGGQRAAAIMS
LIQSARLNGHDPYAYLKDVLTRLPTQKNSQIAELLPHRWQPAA
>AHV93240.1 sodium/calcium exchanger family protein [Bordetella holmesii ATCC 51541]
MFLSIFLFLLAAAIIYLACEFFVNGVEWVGHHFRLGATATGTVLAAFGTALPESAVTFMAVVFGQTPEQKDIGVGAAMGG
PLVLATLAYAVVGLALLRARRAGQSLVINADQPRLARDQAWFMGIFVFKVGLGLLAFAWKPWLGLFFLAVYGLLTCSP
>AHV93241.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELSDLRIFLSVAREQSVTRAAKALDRVPSNVSTRIQQLEDSLGAALFTRDSKRMLLSDAGQTLAGYACRLLDLAAEAEQ
AVRVAEPGGCLRLGSMESTAASRLPQPLARLHARHPGIDLQLRTGTTRALADAVASHALDCAIVAHPYPQRSDDVGALGV
GLQGHYLFTEDLLLVLPPGGGQPQALAAFARGCVYRERAEQWLREAGSDPGRLQIMELASYHAMLACVMAGSAMAVLPQS
VLALHAFALPTRAIGPAHCFLIRRQGHASANYQALLAALRD
>AHV93242.1 putative major facilitator transporter [Bordetella holmesii ATCC 51541]
MYYVFVPVCALILVWRVRPSAVTGLHQVDEAPVHFVPMPDTLQSSPAMVTLDPRVDVEVDPAMEMLTPEADVVQPPAPAA
EPPAGTAAFDNVVAEPGEAATVLPADGAVPSEGSKAAGG
>AHV93243.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELRHLRYFVAVAEALHFTRAAQRLGIGQPPLSLQTQQLEREIGTPLLLRLPRGVELTEAGAQLLVDARSILAAADRAID
TARRLGRGERGAVSVGFTASAVFHPYLPRAIRAYRDRYPGVHISLSESTSAALLQALRLEEVDVAFVRPPYALEPECATE
RVLDEPMLVALPPGHPLDRKRSVPMTDLAEEAFVLYPRPIGAGLYDAILSACLRAGFTPRVIQEAPQMASIISLVAAGVG
IAIVPAAMRHMGAEGIEYRPIRGDAPRALLDMAYRRHERSTAARNAIALLRELAPTPG
>AHV93244.1 hypothetical protein D560_0813 [Bordetella holmesii ATCC 51541]
MARTRSTTAPRLNREATRLASLAQALNRSGSHIEDLYWEAQLAESIGKLLRPGSDGPLEAALDHLAQSDIGAYEVLIEQA
ETLSESMKADKNGVCHDVLLLVAPVVAWTRYAIPTGPIPAPAQQALLAQLHGHVLASNTRVALMPHLVSIDQMPRTFSET
AQWMQRLASQALGATPTRTMIDSAVETANMLADTRYLVAAVAVPEHAPIFRWQEQPEDAESSRDACLARWSEQAMPTLSG
LMPGCGLECLLPDAYYVSNREADRRVRPLSLRAAVSWLEGATSLPADQLRAVIAACGQEHIEEFRIGFTPRNSNDVYYGC
VWPVYGREEALPGEDENAADPAEQIAAVLKEYGVTDIRRIPGRLQTEFCEDCGAPYFPDPLGVMVHAELPEDAEAVPAKF
H
>AHV93245.1 hypothetical protein D560_0346 [Bordetella holmesii ATCC 51541]
MQKTALLLASFALCGASQAAVLTEKNISLEDARHLADATVAACQAKGYNVTASVVDRAGVLKVLARADNAGPHTIEGSRL
KAYTSVSAKSPTLAMMENAQKNPGAANLTDIPGFLLLGGGVPVKSGDTVIGAIGVAGAPGGHLDAQCADTALQDNAARFK
>AHV93246.1 RDD family protein [Bordetella holmesii ATCC 51541]
MMYEGVLLFGVVFLAGYLFDTLTQSRHALALRHTRQAWLFLVMGLYFVLCWRHNGQTLPMKTWHIRLVDRHGRVPGLPTL
IWRYLLLWPLPLVAAGLVALASSMSRWPSMDLFIVVAPFAIFVPSWLDPDGQFLHDRLLGTRLESAAQAKA
>AHV93247.1 ribosomal protein S20 [Bordetella holmesii ATCC 51541]
MANTAQARKRARQSVERNKHNSSLRSMLRTAIKRVRQAIATGDKAVAGETLRKATSVIDRVADKNIIHKNKAARHKSRLA
AAVKALA
>AHV93248.1 GMC oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MTRQAEFQANGDAQADIVIVGSGVLGAMIADQLAARGHAVLILEAGLRIERGQAVENWRNMPFANRAGSDFQGLYPQSPD
APAPLYFPENHYVHLSGPSAGSFKQGYLRTVGGTTWHWAASCWRHLPVDLRMKSTYGVGRNWPISYEQLEPFYLQAEDEM
GVAGPNDPAQQSPSERSGPYPMDMVPWAYGDQRFADVVNPHGYRSVPIPQGRSIHPWRGRPTCCGNNNCQPICPIGAMYN
GIHHVQAAEEKGAKVLAQAVVYKIDTDENNRITAVHWYDAQRQSHKATGKHFVLACNAMETPRLLLMAADARNPKGIANR
SDQVGRNLMDHSGFHCYFQSAEPLWPGRGPAQSSCLVGPRDGAFRARYSANKMILNNITQVTLATKTALARGLSGKALDA
EIRRRAAHGVDLSINLEPLPEPGNRVTLSKTRMDPLGLPCPDVHYDVGEYVRKGAEAAHTQLRHIGSLFGATDFLITTDL
NANNHMMGSVIMGSDPRDSVVDGDCRAHDHDNLWLPGGGAMPSASVVNSTLSMAALGLKAAAAIARRLEATS
>AHV93249.1 cobalamin synthesis cobW C-terminal domain protein [Bordetella holmesii ATCC 51541]
MNTSRSLDKMVPVTILTGFLGAGKTTLLKRILTEFHGRRVAVIENEFGPESIDNDLLVQDSDEEIIELSNGCVCCTVRGD
LMRTLNELRVKREAGQLTFERVIIETTGMANPGPVCQTFFMDDDIAEYYRLDAVVTVVDAKHGMATLDAQPEAQKQVGFA
DRILVSKRDLVNDADYEALRARLLRINPRAPITPVHFGEVELKSIIDISGFNLNSILDIDPDFLADEHPDAKHDHDHHDH
GHGHDHDHDHDGDCGAHCNHAHHHHHHQHDDKIGAFVFRSNKPFDPARLEEFLGGVVQVYGPDLMRYKGILYMKGINRRM
LFQGVHMMMGAEPGKPWTAAEKPSTKMVFIGRKLPQEIFTRGLEQCLVG
>AHV93250.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MYMPTRRGFIAAGTLMALTRPLRAAAKPVTLIVPYAAGGPNDNFARLLAEGMGARTGRPFIVENKPGANGIIGASQVARA
APDGSTLLMGGSGPISLNILLRPGLQYGFESFDSVAMLFDGPLTISVPPQLGVSSLPDLVAYARRQGRALTYGSLGPGSV
TDLYGLILSKALDIPLTAVPYKSTPTSLIDLIMGRNDLSFMTPIALADHQKAGAVKILTLTTDRRDPALPDVPCVTELGY
PQLKASYWTALHAPRGTPAALIHAYAEAAVNTVQTASFRQMLLTNGQTEKAGGPSALQAQLQADRQYWGKVIKDNHIVLD
>AHV93251.1 HAMP domain protein [Bordetella holmesii ATCC 51541]
MLAPLFLLWPMSVAITYVVAQNIANAPYDRTLANNLHVLTRQIQAEDGRAVLHMSDAAREVLRADETDSVFWLALGSRGE
YLGGDRALPLPPLAGQPRPGQVLYADDSLRGFDIRLAYTWVDLDLPGTQPPLLIVAETGEKRAQLANDIIKGVIIPQFVV
LPVAVLLVWFGLSRGVAPLNALQQRLRARRPDDLSPIDEHAAPSEIAPLVAAMNDLLDRLSSNVEAQRRFVADAAHQLKT
PLAGLRTQAELALRDASPDEMQSSLRQLVTGSDRATRLVNQLLLMARAETPDATGMSRVDLNAIASEQTMHWVPQALSIQ
TDLGFEGCDQPVEILGNPILLGELINNLVDNALRYTPRGGHITLRVKNEGRQAVLEVEDSGPGIPPEERERVFDRFYRVL
GTVADGSGLGLAIVREIAQKHHASVLVDSHPSEHSELPGTRIAVTFEEYATLTSPDPLS
>AHV93252.1 hypothetical protein D560_0147 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSARQVPFAA
>AHV93253.1 his Kinase A domain protein [Bordetella holmesii ATCC 51541]
MPGSSAISFLRTLCSLRWLAIGGQAITVLVASSLLGLPLPLEPLWAGVGALAAFVLPGGWAFAAALASLAGYTAAAVFGQ
PLASSHNTYLLLLWGLGANFLISAGVVLYFSTRLATDMRAQERELALLRERFTRNEGIVALATHAAAMAHELNTPLATMT
LLVDEVREELQDDPDQRADIDTLRELLALCRERIRNLAVPTEVDLVRVVGQWRLIRPTIDLRRTGSLPESLRVEPSIAHL
LQALLNNAADAGEEAGDPRVDLHLEFLGGALRGEVRDHGRGFDPDHTVLPALFNSDKPGGWVWAWRFRMPRWNN
>AHV93254.1 trypsin family protein [Bordetella holmesii ATCC 51541]
MVTVDSYAPAVAHAAPAVVNIYTTKHVNVPVVPLPDDPALQQLVGSIPGLSRRESTNSLGSGVIVSEQGYVLTNFHVVDA
ADAIEVALADGRQVSAKVVGADTETDLAVLKLEGKLDKLPVASYAEGRRLRVGDVVLAIGNSYGVGQTTTQGIVSALGRN
GLGINIYENFIQTDAAINPGNSGGALIDTQGNLVGINTAIYSETGGSMGIGFAIPIDAARRVMDEIIKTGKVRRGWLGIE
LQDLTPELTRSFHLDSSATGVIIASILRGGPADKAGLRVGDIVHSLDGQAVNGTTSLLAQIAAVTPGQNATLQVLRGGKT
MEIKVVMGTRPTRPK
>AHV93255.1 hypothetical protein D560_0739 [Bordetella holmesii ATCC 51541]
MDKASLTLDSPGGGRLPVGASQFLTLGAVSARIPDMENNARLHLDGASSGPVAAYLALAANSPLGGLLDDALSESSGTGD
WRVPLTLDVPLLNAEETAVQGQVIFSGNNFRFMPEIPVLEQVYGTLDFSDRGIEVKDIQAQFLGGPVRIWGKMEKGSEPL
RFEGTLAGHALTQVINARAMKRFSGKTAYQGQLNYQRGGAVDVSARSDLMELAIDMPAPVGKKAGAALPLKMQWTAATDA
GSRNRRWLTGSLGENINVLLERDERDRSGTYFARGALGMNRAASLPRQGLTLAASLPEIDVAGWEAVIDEFDEPAHRATA
RKTAQPTLPPLNQVNLATPLLRSSSMDLTDLKLFAQRPAPAQWRVDLESRQATGRLEWTEGSGQSPGMSWLG
>AHV93256.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93257.1 hypothetical protein D560_1015 [Bordetella holmesii ATCC 51541]
MPFLWERTLHRFRTNHGEQVSGTNNNCGNGTTPWGTYITAEENWASCFVNTATRPAHQVRVGVSTATGRYGWESAANDPS
EVLGEFARFNITPTGIDATQDWRNEVNGFGYLVEIDPYDPNSIATKRSALGRYAHEGCAYGKLEAGKPISFYSGDDSQFE
YIYRFVSEAVWDPKDAERTDRLAVGAKYMDRGTLYVARFNADGSGEWLPLTPASVGTGGRTLGDEFGSLENIIINTRGAA
DFVGATPMDRPEWTATHPGNGDIYLSLTNNTRRNATSGVNAANPRLNNVNGHIVRWHDEAGANTFKWDIFVFGSGAGADA
DTNRSGLTAMNELASPDGLAFDDRGILWIQTDNGIDNGRNNDVARTINDQMLAVIPGALADSSGTGPVINASNQADLRRF
FVGPNEAEITGFAFTPDYTTIFLNVQHPVNWPAYDTDDATVATTSRVRPRSSTVVIQRADDGKIGV
>AHV93258.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MSDISVTQLSKTYPGVSPVHALDRIDLQVDEGEFIALLGPSGCGKSTLLNLIAGFEQASEGQLRVGDQAVTRPGPERGVV
FQEAALFPWLSVWENVVFGPKIAGLPKSDYLPRAEEMLEITGLSAFKQHLPVQLSGGMRQRVGIARVLTLGSKVLLMDEP
FGALDAQTRLTMQELLLSVWQRLRKTVVFVTHDIDEAILLADTIYVMSARPGRIATRIKVPIERPRSLDLITGEVFNGLK
RDIMGQMRH
>AHV93259.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93260.1 receptor ligand binding region family protein [Bordetella holmesii ATCC 51541]
MKTVKHWLVAASAIVACTAHAENIKIAYNGDISGSPSAESGQIGVMGIAAAVEDINKRGGVLGRKLEFLVRDDLGQPPKS
IQNMTDLIDREKVAVVFGPTNSGNALAWKHIANQKKMPVLVSSASSTAITEPAGNNPNYLFRISMVDRDQAAALIAYAAK
SPQAKKNRVFCRDYGLRASGSEGYGADRGTARHQAGGDRKV
>AHV93261.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MSRSLICSVLLLAALAVFPLVAPALGLDFYISFVRRVLIYALAATSLNLVLGYGGMVALGLAAFFGAGAYAVGMLGAAGV
MSALIVWPAAMLLAALLAWVIGAISLRTRGVYFIMITLAFAQMVYYIFISLRQYGGEDGLNLSGYSTLPGLDLSNDVVFY
YVVLAVLMLVMAGFSRLVASRYGMALQGVRENEGRMEALGYPVYRIKLTAFVLSGAAAGLAGALLANHNLFISPTLMHWT
QSANLLIMVLVGGIGLRYGGVAGATVMLVLEEVLRQWTEYWHLPLGLLLLAVVFGAPRGLAGLAAPWFASRQSKAPS
>AHV93262.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELSIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV93263.1 periplasmic binding family protein [Bordetella holmesii ATCC 51541]
MFGTGQAPAIIARNYRQLAMKQPLYTSHGQASMEFVRLAGEAAEGIRMPSPALQVARSLPASDPQREVSVSYAQAFEDKH
KVEVSTFGGYAHDGMLMVADAIKRAGGTDPEKLRKALEETKGFVGVSGIYTMTPEDHMGLDISAFRMVEVRKGAFQALP
>AHV93264.1 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Bordetella holmesii ATCC 51541]
MNFDVSVIWDALPNLLDGTLMTVKITLCGLVGGFILGALAGVARAYGPRPLAILAQVYVAVIRGTPIVVQVMFIYFALPL
LLPGMRVEAETAAIATLIINSGAYIAEIVRGSLLSVARGLKEAGQAMGLPFSKILFHIIGPVAFRRMIPSLGNQCIISLK
DSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAVVYLILTGLMALGLRLLEKRMRIL
>AHV93265.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93266.1 type II secretion system (T2SS), F family protein [Bordetella holmesii ATCC 51541]
MQAMLNDPSARWFLISAVIAMMIACLVVSVAVFVRVGRADRNRAVVDRALAAREGVALDAVRPPKGARERAAAMTHAASS
MGLRIGQGRLGESLLAAEDRRLVELYFLDQSQRARGLFIMSRAVLAVLFPLLAWWLLDDFLDRRGVLAWMIAVFFGFAVG
WMLPKWWLMRRWRARRKQAENELPLLIDLLRLLQGVGLSVDQSIHVLVTDFRTVMPVLAAEMRHSAELHTRGRSREQSLG
RLAVDYENDDLTAICRLIVQVDKHGGAVQEPLARFSDRVRERRKLDLKAHVARLTVKMTGVMVLTLLPALLIVTGGAGFL
AVIRGLSRINGG
>AHV93267.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MIKTLLAIAMTLGVAGPAAAAYPDHPIRMMVPFPPGSITDVVARSLGQAMAEQLGQPIVVENKPGANGIIGTGEVARAKP
DGYTLVVVGVSTAASAVSLFKDLPYHPARDLTPIGAVAETPYLLVGGHQVPGTNVGELFNYGRQHPGMLTYAYGSGSAQV
FGAKLAAMGEMNVTPIPYRGGPQAMTDVIGGTVDLTFTDLANGLQQARAGKVKVYGVSTPERFALTPDIPTLNESGAPGF
DLTVWFGLMGPAALSPEITDRLALALNTALDSDAVREAYARQGLNVKTQSPAQFGAFVQSEIDKWAAIVKETGIPAQ
>AHV93268.1 spoU rRNA Methylase family protein [Bordetella holmesii ATCC 51541]
MFHVILVCPEIPPNTGNAIRLCANTGAQLHLVRPLGFELDDVRLRRAGLDYHEWQPMQVHDELPVALAATGAPPDRIFAM
TTHGARSAAGMVYQPGDVFVFGRETAGLSDEHVALFAPAQRLRLPMRPGQRSLNLSNAVAVTVFEAWRQQDYAGGE
>AHV93269.1 orotate phosphoribosyltransferase [Bordetella holmesii ATCC 51541]
MSSTTATDFVRFALDEGVLRFGSFKVKSGRMSPYFFNAGLFNSGRSVGKLAGFYAQALLESGVEFDMLFGPAYKGIPLST
ATSVALAAHPQAGGRDIPFAYNRKEAKDHGEGGTLVGAPLAGKVVIIDDVITAGTSVRESVDIIRAAGAEPAAVLIAMDR
MERAGPDDALSPHSAVQDVAKTYGIPVVSIASLADILKLLEGDDQFAANRASVLAYRQKYGV
>AHV93270.1 glucose-phosphotransferase regulator family protein [Bordetella holmesii ATCC 51541]
MRWLSGRGAKADAVAAMQARIPEPLWKDVLEAYPFLGALIDTDLSELRRRAAWLLASKQINGAAGLQLTDFMRLAICAQA
ALPILKLDPRLYEGWDEIIVYPSGFAIAQSVQDEDGVVHEYMEEAAGQAWDGGPVVLSWDDAANAQGAFNVVIHEFAHKL
DLQAGDADGTPDLSAYRDLRPRVWREVLQTSLAHFCTALDEIEASIPADVDPESDEADPWYGQLPLDPYAASDEAEFFAV
SSEHFFVDPWALARSMPHWYALLSSYYRQDPAARLA
>AHV93271.1 hypothetical protein D560_3097 [Bordetella holmesii ATCC 51541]
MTSLAQLPACDTSQLGDLPCTGTLVLTVNNRLSRRLTLELAARLRADRQVSELPRILPLSAWLASAADELSFTVHAELPA
YRLGGFAAQLVWREAIQREEAERELLDIDQAARLAMDADMLCNEWRLDVPESAMTDEYRGFARWRERYRSLLADLDADDA
NQGYERVLRALRAGELMPPERVVLAGFGEISPRFARLLAALEEGGAVLLVWREGQRERAHPERVLVADHGAEWRAAAAWA
ACRLRENPAGRYAIVSSQLESEAPFARRVLMQALQGEPGQAELPFNVAVGRSLIEWPALRAALAWLQAVAEMGSAGKVAV
PVLGAAMLAGHCAGDRGERHAALDARWRRLGRIDVTEASWRSDLQYSPVWRRLGRPR
>AHV93272.1 intracellular septation protein A [Bordetella holmesii ATCC 51541]
MKKFLFDLFPLILFFVAYRFADIYAATAVAITAAIAQIIWLKLTGKAIEGMHWINLSVIVIFGGATLWLHSDVFIKWKPT
VLYWLFGGALLASRYLFGRNLIRRLLEKQISLTETLWNKLNLTWALFFLLAGGVNLYVAFSGHFSESQWVNFKVFGLMGL
LIAFVILQSLWLGRHMQEPGADKKGHSD
>AHV93273.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MACRFSRSLSCGAAAVLLAFCTQASARDLVIALKTEPSSMDPQYHALTPNTQISGTLFNALVETDEKLQPQPGLAESWTV
DGKVWTFKLRPGVKFSDGSPFTAEDVVFSFDRIPKVPNSPSPFTLYLGAVAKTEALDPMTVRITTKELAPNLLVNLAQLP
IMSKKAASGPAPEGKTTTELNGGDGLVGTGPYKFESWKRGAELVFSRNDNYWGPKPAWDKVVYRPMTNAAARVAALLAGD
VDLIEDPPTDDLPKLKSNKKLHVEETPSVRVVYVALDQFAEPSPGVKGTDKNPMKDKRVREALSLALNRDAIVERVMGGV
AKPAGNLLPYPMFGASKEHAQAPKADVEKAKALLKEAGYPNGFEITLGAPSGRYVNDAKVAQAIASMWTRIGVKTNVDAL
APPVFFKARDSYALSAYLAGWSVTSGEMSNALASLLVTRNPEAGLGTTNRSRYSNPDMDKLVIEASGTMDDGKRAELLQK
ASNLAMDDYAMLPVHFELSVWAMKDDVRYKGRPDQTTLAQNATPKP
>AHV93274.1 hypothetical protein D560_0489 [Bordetella holmesii ATCC 51541]
MGQIGQAGGRIHDRTPGDKTARRWLRREYRECQRFSAVARRLKIYNQVKSPKP
>AHV93275.1 hypothetical protein D560_1251 [Bordetella holmesii ATCC 51541]
MSAAFYDYVRGLTDRVPPGYSVAGMRVYRYLVYLGASQMVEASFPGLRQGLGEPAWRALIEGFVRQSAWTSHFYGDLQHE
FREFLARTTA
>AHV93276.1 mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MKIKSVRARVFQWKGKTVPPQGNFCSNAMDLLYAPQESMSTFRFHSWTVVEIETDDGIVGLGNVALAPAIAKAIIDQYLA
PLVIGHDPWDYEYLWQRMYRATHAWGRKGVTMAAISAVDLAIWDILGKSVGKPVFKLLGGRTKEKIPCYYSKLYRTDLKE
MQDEAQRFLDQGFTAFKMRFGYGSAHLQHGVSENLKSVQAIREVIGYDNDLMLECYMGWNLEYAKRMLPKLEKYEPRWLE
EPVIADDIDGYAELNQLGSIPISGGEHEFSLYGFKQLLDRRAVSVVQYDTNRVGGITAAHKINALCEAYSVPVIPHAGQM
HNYHLTMSTLASPMSEYFPMHDVEVGNELFYYIFEGEPVAEGGFVQLRDDVPGLCLTLNEKYLDQFNIIG
>AHV93277.1 UDP-N-acetylmuramate--alanine ligase [Bordetella holmesii ATCC 51541]
MKHRIQHIHFVGVGGSGMSGIAEVLLNLGYRVSGSDLNESAVTRRLADLGLQVAIGHAAENVAGADAIVTSTAVAGDNPE
VIAARAARIPVVPRAVMLAELMRLKRGIAVAGTHGKTTTTSLVASVLAAGELDPTFVIGGRLNSAGANAQLGQGEFIVVE
ADESDASFLNLLPVMAIITNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAVLCVDDANVREIMPFVSRPITTYGLNA
EAQVRAENVRAEGTRMRFTVRRRDRDIELPTLEVELNLPGLHNVRNALAAIAVASELGVSDEAICQALAAFKGVGRRFTQ
WGDFPVSAEHGGGKYTVVDDYGHHPVEMAATLAAARGAWPQRRIVLAFQPHRYTRTRDCFEDFVRVLGTADAVLLTEVYA
AGEAPLVAADGRALSRALRVTGKVEPVFVENVTELPQTVRGFMRDGDVLIIMGAGSISKVPSQLGEWA
>AHV93278.1 ribonucleotide reductase, small chain family protein [Bordetella holmesii ATCC 51541]
MLNWEDDNLAAQAAKAPATHAGAGGAAPEPLRPSTGVFGDSAMPTAAAPQSAADLSGTTARRVKVADKRIINGETDVNQL
VPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECR
QFLLRQAFEEAIHTHAYQYIVESLDLDESEIFNAYNEVPSIRAKDEFLIPFIEAIADPNFKTGTPEADQTLLKSLIVFAC
LMEGLFFYVGFTQILALGRQNKMTGAAEQYMYILRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYA
YAEDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGGTLSWE
>AHV93279.1 pepSY-associated TM helix family protein [Bordetella holmesii ATCC 51541]
MSWLHTWTGLFCGWLLCAIFFTGTLSVFREPITRWMTAEPTLPAVASVHLTPLELALRYLESAGSGARFWRIELPAHEGG
AMTVAWAGRGGVEELKLHPGNGEVLPQPWGRDTQGGRHFMSFHYTLHLPVLGYWLVGLVSIGMLVALLTGVIIHRRIFQD
FFLFRPGKGLRTWMDAHNVSAVLTLPFLFMIVYTGLAVFYLSYMPWPLQTLFGDYGYSRYQAALHGDAPASGPRFDGLPA
MVAGTESLTRQRASMVLIEFPDRVRVFGTVDPGKPALTLGNPMAIASFAGGQLVKLNTPHDPMHAEAVHGVMESLHLTRF
AGWGLKWLYFLSDLLGTLMLACGNVMFLSKRARKSQHEFGPATPRFYRLTAALNAATMAGICLASIAYFYANRLIPASLP
GRADWEIRVFLLVWLAALLHALCRPAERVWHEQLSLTAVLCLGLPLLNYVSTGQHLGLYLAGGDGQRAAVELISLAFAVV
LGGLALRLRRSTS
>AHV93280.1 type II/IV secretion system family protein [Bordetella holmesii ATCC 51541]
MSASMVFGNGEAADEFAGSQRYQDVKSQAYEHLLSRIEELGAEFGRWTRAAIQEFVEIEVAGFARMRRLALNEAELSHIS
SALTKELAGLGPLEDLLADPAVEDVLINGYNNVFVSRRGVLARESLRFTDNQHVLRIVRRILAPIGRRLDESSPMVDARL
PDGGRLNVVIEPLAVDGPMVSIRKFRQDPLKPADLLVLGTFNEEIHRLLSLAVKHRCNVLVSGGTSSGKTSLLNALAFFI
PEGERVVTVEDTAELSLNHPHVVRLESRQGGFDGAGAISIRDLIRNSLRMRPDRVVVGEVRGAEVMDMLQAMNTGHEGSM
ATIHANSPRECLYRIEMLAGFAGFQGSEDSLRRQIASALDFIIQIGRLPNGKRRVISVTEVTGMGDNVIATQELYRYESV
LAPDGEDRDNWVGLGINPHTPKLARAWADMRASLAPEDPEPSSGGAGFWGRRR
>AHV93281.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MSDLQIGLIVLGVLLILLVLGFNWWQDRRVRRRMQEHFPASEQDPLLGGEEPARSVAPASEPARQRREPGIGQAAPVDAA
PAGAIAAAAPVTAEGDDGEEPDPAVEVVIEIHFAEPARGTDLLPYMQSLRQVGKKQLRVFASTDRGRHRSRIAPEESYST
LQLAVLLANRSGPLTAIEWSHAWARAQDLADRFEGSIEGPDQQAVLEQAARLDDVCAALDTQVGLTLMLGAAQPAAEVLA
VARGLGFAPDGARLAWLNDAGAVRFTLARGDGAAFDAGMGGIERLYLLLDVPCSPSDPHAFGRMVEVGRDLAGRLRAELV
DDQGRVLADGADAVIDERLRALFEQLEQAGLPAGSERAQRVFA
>AHV93282.1 ribosomal protein L36 [Bordetella holmesii ATCC 51541]
MKVLASLKDAKTRHRDCQVVRRRGRVYVICKSNPRFKARQGGARNRNS
>AHV93283.1 serine--tRNA ligase [Bordetella holmesii ATCC 51541]
MLDPILLRKDLQTVVDRLKSRGVDFDIARFNELESRRKAVQTETESQQARRNALAKQIGQLKGKGAPEAEVQAVMAESQA
LPARLKALEDELAQTQAQLNDLLMSVPNLPHASVPQGVSSDENVEVRRWLPGAADERGIPAALGFEVRDHVAVGEPLGLD
FDLAARLSGARFSFMRGQMARLHRALAQFMLDLQTGTHGYTECYTPYIVNSSTLFGTGQLPKFKDDMFFVTKGGGDDEPK
VDEQGNPLAREDQYLISTSEITLTSVVRETIVAGADLPLRLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQIAHPE
HSYEALEEMVGHAERVLQLLELPYRVMLLCTGDMGFGSAKTYDLEVWLPAQDTWREISSVSNCETFQARRMQARFRNAQN
KPEYVHTLNGSGLAVGRALVAVLENCQQADGSVRVPAVLQPYMGGLTVLEP
>AHV93284.1 monothiol glutaredoxin, Grx4 family [Bordetella holmesii ATCC 51541]
MSDVQDFIRDTVSQHPVVLFMKGTAQFPQCGFSGRAIQILKGCGVKKLVTVNVLEDDEVRQGVKTFSNWPTIPQLYVGSE
FIGGSDIMNEMNESGELKTLLDDAGATV
>AHV93285.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MGLSIFPVVYFAVSRSMAASGGRLAQVARVCGAGPYRAFLRVSLPLALPAIAASLLLSFTLAIEEYGVPAALGGQAGVSV
LTTAIERRLADWPIDLSGAALLSLVLVALALTAYCVQRAVLRGRGFDTTSGKPVPLAHAELGPWRGPVVAVFAAVAVLAA
VVPLASMAASALQRTISGGLSPHNLTLANFAEIVGDAQGYESLLTSLLLAASAALLTGSLGFVAAWLVAGKHVRGAAWID
ALALLPAALPGVVVGVGLILAWNQPFWPLTPYGTWAILLLSYSCLLLPYPMRYAGAALTQLGPSLEAAARVHGASVLRAL
WRITLPLTAPSVIAAMMMVFAVASRELVTSLLLAPAGMSTVSVYVWRQFEQGSVGAGMAMACVAVLISLTLMLAGLRLQA
RGDTR
>AHV93286.1 thioredoxin-like domain protein [Bordetella holmesii ATCC 51541]
MVYTFSDPNCPYCNRFSETARPWVQAGKVQLRHILIGIINASSSTKAAAILGASDPTAALIENERNFRQGGIKPAASVPE
VVRTRLTQNHDLMAKLGFRGTPGIVYLDDQGRLQRLNGLPRTGGWERILGHR
>AHV93287.1 fusaric acid resistance family protein [Bordetella holmesii ATCC 51541]
MIAKIFTYRPTLSDAIFSSKNFIASMLALYLSLCLDFQRPGWAMATAYIIAHPLSGALTSKAIYRVIGTWLGAAVAVLLV
PRLVNAPALMSGTLALWVGLCLYVSMLDRRPRSYIFMLAGYTAAIVGFSSATEPLAVFDTALARCEEITLGILCATLVSH
LILPRHVGGLIAARIEGWLRDSATLLIDSLHGPQGHKRMPHDMQNLAAGVAELRTFFVHLAYEKPQLRGGEGALRILHDR
MSLMLPVIGAISDRVTALTTLAAGTCPDDIARLTGLLQRWLRPPTHDDDAANLHRLRVAIGQLRSSAQMTRSPPGTQAWE
AILRTSLAMRLDRLIELRQDAHDLWRHIERGDVPRRRVARRLPTAELRDHGVALRCGVAKARLRKAEPLSVSKRWMVTPR
RW
>AHV93288.1 hypothetical protein D560_2365 [Bordetella holmesii ATCC 51541]
MVLEFPTMAAAQAFYDSWQYRRARNAREGAAVMNMFIVQGM
>AHV93289.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MSQPSSLPDLPVNPVDVRRQFARRGDLSEAQFLYGEIARRMLGRLGYIRLQPQAMLDAGCCAGDNLPLLRERYPQAAYTG
LDHCAPLLAIARQRFQPAGLPALVAKLTGRGKPSTQFVQADLAQTGLAPESLDLVWSNLALHWHPAPHAVLAEWRRILRT
GSLAMFSCLGPATLKELRSALETAGLQTATPAFVDMHDFGDLLVENGFADPVMDQEILTLTYATPEKLLQDVHALGGNPA
RGRRAGLATKAWRQRLCAALENQRGADGRISLTIEVAYGHAWRAAAHRTAPGETRLSIDAIGGRRAGS
>AHV93290.1 5,10-methylenetetrahydrofolate reductase [Bordetella holmesii ATCC 51541]
MTDTTSPAFSLEFFPPRDIAAQERLVRAAKQMLAIQPRYVSVTFGAGGSTRAGTEDTVRTLTNLGCDAAPHLSCIGASRE
QLREILNNYRQAGVRRVVALRGDLPSGMGGDAGELRYASELVRFIREETGDWFHIEVAAYPEIHPQAASPTVDLDHFVAK
VQAGADAAITQYFFNADAYFDFVDRAQARGVSIPIVPGIMPITNYSQLSRFSEMCGAELPRWIRLRLAEFGDDKASIRAF
GQDVVTELCQTLLDTGVPGLHFYTLNQSEAILGIWKNLQR
>AHV93291.1 thioesterase superfamily protein [Bordetella holmesii ATCC 51541]
MNRETTEGTLIAEGAWHQIDLPLRWGDMDALNHLNNTIYFRVMEEARISILLQAGLKLPDSEGPILAHASCDFIKPFGYP
ATVRVTHRLVRLGRSSMELDLTLEKVGDSSGPYARGRNVLVWMDYVANCSKAWPADVLARLGAQFTAA
>AHV93292.1 hypothetical protein D560_2378 [Bordetella holmesii ATCC 51541]
MINLNNTYRLTDELERQLMLQAMEEQFRPHPLRALAHGLRKLGHGIKAMFGKTDSAAHTAA
>AHV93293.1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain protein [Bordetella holmesii ATCC 51541]
MDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKCMTKKRLHVQGARVLVMGLTFKENCPDLRNTRVVDIVKEL
GEYSVDVDVYDPWVDADEARHKYGITPVAQPAEGSYDAIILAVSHQQFVDMGAEAIRRLGKPEHVLYDLKYVLSAEESDL
RL
>AHV93294.1 4-hydroxybenzoate polyprenyl transferase [Bordetella holmesii ATCC 51541]
MNAQATRPTDLSDIVFDDWVERWLPRSWRPYARLCRLDRPIGTWLTLLPCIATLVQAAGGLPDLKRLIVFSLGALLMRGI
GCTVNDMWDRDIDKHVERTRFRPLTSGQLTMRQAIWFLLGQLLVCASLLFFINDLSRWWALGVLPFVFIYPFCKRVTYWP
QAVLGVCFNWGMLMAWTDTQNDLPLAAVAMWLGAALWQIGYDSIYAYVDVRDDLKLGLHSTAMRFGAQGKVWISGFYVAS
ALLWTWGGYAMALGWGYFVGMAAVALHLAWQLVTFDLQRPDRNFMLFRANLWTGALLIASALAGTLL
>AHV93295.1 peptidase M23 family protein [Bordetella holmesii ATCC 51541]
MHARAGQDRHFTVGGGRLALLMGLALLAAAVFGAGMQRLLFGASASPYTVDWPSYARSQANRDADFMRENVNMLASKVGM
LQAKLVSIDGLGRRVAEIAGLQYTGAEAAAPAAPLDEATHVMDDLFTDRQPPTPESAEALGRQLDDIQARLAEQADNLKL
LDAALTSHSAEQARVPTAMPIRDYPYLSSSYGWRRNPVTGRYAMHEGLDFSAPPGTPILAASGGVVLLAKGQPGYGNMVE
IDHGNGLITRYAHASRLLVKAGDVVERGQEVARVGSSGRSTGPHLHFEVRLAGQPLDPRLFLGSQNTVAPVVAQAQQARG
AATTAAP
>AHV93296.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MLTQEQAVEIKVMARRGVSIREMAKQLGCSRNTIRRYLREAGAQQYKPREARTTKLDPYKDYLHGRIEAARPHWIPAAVL
LREIQELGYPGGVTQLKEFLGGYKHQEPEPVVRFETPPGKQMQADFTHIRRGRDPLMAFVATLGYSRSSWVRFTTDERAD
TWFGCLRQAFIYFGGVPQHVLFDNAGAIITERDAYGPGQHRWHNGLLAVAQEFGFTPRVCQPYRAKTKGKVERFNGYLKG
SFCVPLAATLKQAGLRFDVTAANAHVGRWLTEVADQRLHGTTRERPAKRLQEERLALLQLPAQHGMLVPATSHRPVPRES
FQHPLSVYNELLEVRA
>AHV93297.1 UDP-N-acetylglucosamine 2-epimerase [Bordetella holmesii ATCC 51541]
MSKKVLTVLGARPQFIKASVVSAAIAAHPGLQEVVVHTGQHFDANMSDVFFEELGMQPPAHHLDIHGGGHGDMTGRMLIE
LERVMQQEQPDIVLVYGDTNSTLAGALAAAKLHIPVAHVEAGLRSFNMRMPEEINRILTDRVSTWLFTPTDSASRHLQSE
GIRGDSVVQVGDVMFDVALHHGRRVTQDGGLLARLGLTAGGYILATIHRAENTDHPERLNVIVNALLALAVERAVVWPLH
PRTRGILQRLNLLDALAQRVQLIDPVGYLDMVQLEKYAALIATDSGGVQKEAFFHRVPCVTLRDETEWTELVDAGWNRLA
PPTREQDIVDAAERALHETPQDVQPYGDGQAARKIADALA
>AHV93298.1 phenazine biosynthesis, PhzF family protein [Bordetella holmesii ATCC 51541]
MPDYRYRLVNVFADSVFGGNPLCVFEDARGMSREVMRDLALQFNLSETTFVLDRTQPGVAEVCIMTPTHEMAFAGHPSLG
TAHVLRELGQASDDTVVLSLPAGKVPVVAQGDVWTLVAPSTGAPGLRRAGVSRADVAAFLGLSVEDLAGDPVWVDTGIEQ
CVVPLVSPEAVKRAAPRDCLQWEDSRDGRRVLYAFAFAGQQRAGREVVCARYFSARGAGVVEDPGTGSACANLGGWLQSQ
GREVAGGVLVEQGDLVRRPCRLFLDVDPQGGQIRVGGQVRTLGGGTIHLP
>AHV93299.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MSERESMEYDVVVVGGGPAGLASAIRLKQLAAEKNHEISVCVLEKGSEIGAHILSGAVMDPIALNELIPDWKEKGAPLNV
PVTQDKFLFLSDKGARSTPEWLLPACFHNKGNYIVRLGEVTKWLGEQAEALGVDIFPGFAAVEVLYDDNGAVRGVATGDM
GVARDGSHTDHYQPGMELLARYTLFAEGARGQLGRQLTERFKLAEGRNAQAYGIGVKEMWEVDPAQSRPGLVVHTAGWPL
DSDTYGGSFLYHLDNNIVVVGLIVGLDYANPWLSPFEEFQRYKTHPAIRGTFEGGKRIAYGARAITAGGLMSLPKLVFPG
GALIGCDAGFLNASRIKGSHAAIKSGKLAAEAAFDAIVADRRGDELSAYPEAFESSWLHTELNKARNFKQWFKKGRSVGT
FMTGIEQWLLKGKMPWSLRNDKPDHQALQPASQCARIDYPKPDGKLTFDRLSSVFISNTNHEENQPIHLTLKNPDIPVEV
NLATYGGPEARYCPAGCTSSSRMITAPIACRSTRRTACTARPATSRIPNRISSGLHRRAVKGRSTTACNAAPEALRTEAL
FFREDMTHAVLLAGCGDLGLRVADRLLARGIEVWALRRQPPATSPAGIRWIRADLTDPASLAGLPTHIDRLAYLPAPGSR
DPARYRGLFLDGQRHLLAALNCPPARWVFVSSSAVYGEHHGQWIDESTPTHPLGFNGRILLEAEQSLSGATHAAVILRLA
GLYGPGRTQLLERLRAGQAHVASGHWANRIHIDDAAAAVDHLLHLPQPQSCYLGADDTPMLLDELYGGLARLLQAPAPLP
GPAPANVGSKRIRNQRLKASGWTPRWPDALDGYRNLIAFAGV
>AHV93300.1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Bordetella holmesii ATCC 51541]
MTLRPAQPNTGIVFHRVDLPQVVDLPAQATGVGDTRMASVLQQGNVRVSTVEHLMSALAGLGIDNLHVDLTAEEVPIMDG
SAATFVYLLRSAGIVEQNAPKHFIRVLKPIEVREGEGRNEKWARLEPHEGFALAFSIDFRHPAIDSTANFAEIDFATHSY
VREIARARTFGFVNEVEALRSMGLARGGSLDNAIVMDEFRVLNSDGLRYDDEFVKHKILDAIGDLYLLGKPLVARYVAQK
SGHALNNQLARALLEQQDAWELVTYESQAAAPQAFRHEWKLA
>AHV93301.1 mltA-interacting MipA family protein [Bordetella holmesii ATCC 51541]
MYVGMFTKGALAAVAVAACSQAAAQSQNFIGLGVGVVPVYDGSSEYRTVPLPLINYESGNFFITPRAGLPAMGLKTTLAP
DLSAGVFIGANLGRDASDADRTRGIGDIKFHAAYGAYVEWAPGRYSLGAAYRQAAHSGYGGALELRTSYAVLQTERNSVR
VGAATQWGSRDDMQTWFGVTSSQAANSREGLSTYSPSAGFKSASVFASWAYLFDARWSLLTNLGVSSVLGDARDSPLNER
RTNLFGSVGMVYAF
>AHV93302.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MNRQLLGYFAVAIVVAALPFLGVYPIFAMKVMCYALFACAFNLLLGYTGLLSFGHAAFLGSAAYAAGYALKVWG
>AHV93303.1 nitroreductase family protein [Bordetella holmesii ATCC 51541]
MTVDTALMRAALQAPAVSTVVADPASVQAAIASRFCCREFLGTPVARATIERILRLASWAPSGSNIQPWKVYVVQGASRD
ALSRKVCEANDALAADPALASQYREEYQYYPDPWVSPYLERRRACGLGLYGVLNIAKGDRLRMHAQMQCNYEFFGAPVGI
FFTNESLMAEGALVDTAMFVQNVMIAARAEGLHTCIQAAWNPFASIVLPHLGAQKERLVCALALGYADEQAPVNTFRPDR
VDPAAYTSWLDLAPSARACRTLVSDTYDGHAETSLSFSLIERQRRRDSF
>AHV93304.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MTIEADPFYCEGSRAICMSRRSMEILAWAGVDKLVLKKGLAWSGGRSYYGDREVLHFEMPHEPSQRFAPMINIQQFYIEE
YIDQALREHGDLAQVMWSSRVTGVQQNADGVVVTVQTGGQTRELHADWVLACDGGRSTVRELCGLPLQGMQYEGRYVIVD
VRQKSQRATERLAWFDPPSNPGSTLLMHRQPDDVWRIDYQVRDDEDPVEAVKPENVLPRVRSHLEMIGEDEPWEPLWISI
YNAKCLTLDNYRQGRILFAGDAAHLVPIFGVRGLNSGLDDAANLAWKLAGVIAGSAPDTLLDTYSQERVAAARMNIAYGA
KSTEFMAPPNYGFDLLREATLRLALHEESVRSLINPRQSEPVCYQGSALNLPDGAADAGDQAAPGMPAPECELSEDGRTR
HLTEWFGQRFTVLVLGDDVPEFDAGQNVQVLCLGQHTAVRDTGQLRQRYGQAQLYLIRPDGYVMGRWKKPDLQALRQALA
SFGIRGETP
>AHV93305.1 putative transposase [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGAGRSEAQGAGAGEQQAQEAVGRVDAGQGVSADVILTHRVGVNLTHLGDDGGLLAADN
VDSGASSGDQGNGASWRQHSGDGQAAGLLTQHDQAVSA
>AHV93306.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MSAFLQQLLYGLSVGSTYVLIALGITLVYRGMDLINFAQGEIFMAGAFMGYVFHVDLALPIWLALPCAMASGLLLGAMLE
RVFLRRIENSSPLTLFMMTVALFILLRSAAQLIFGASAYRFPPFSERVIEIGGVQIGMQYLLIIAVSLVMMAALYWLLTK
TKIGLSARAVAQDRTAARMMGINVSRVNCFIYALSALLGTVAGIVYAPVAVLSFDMGNLIMLKGFTAALLGGLGLVSGAV
FGGYVLGIIEQFGTLALSSAYKDMVSFSILLLIILLKPNGILSKKVVKKV
>AHV93307.1 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [Bordetella holmesii ATCC 51541]
MLDLARKRIVLGMTGGIACYKIAELVRRLTEQGATVDVVMTEAATHFITPTTMQALSGRPVFVDAWDARVPNNMAHIDLT
RGADAVLIAPASTDFMAKLAHGLADDLLSTLCVARACPLLVAPAMNREMWSNPATQRNVAQLQADGVTLLGPAAGEQACG
ETGSGRMLEPHEILADLIAFFQPKLLAGRHLLLTAGPTSEPVDPVRVLTNRSSGKTGYALARAAHEAGARVTLVTGATAL
LVPRGVMAIQVMTAQQMYDAVMAHAHDADIFVAVAAVADWRVKNPANQKLKKDSEGGGQPRMEFEPNPDILAEVARLPKG
PWCVGFAAETEKLSEHAEAKRQRKGIPLLVGNLAHKVMDADTTELVLFDALGAHPLPAAPKLDAARRLIAEIAGRFAQGN
VQA
>AHV93308.1 toxin co-regulated pilus biosynthesis Q family protein [Bordetella holmesii ATCC 51541]
MPYSRREPYAVVAGQWQTLIMRGGHHVAYARKVSQDEPAAVAVTSASPQPVPPVEPEIPVPAPSATASPVFFAGPPDGTL
RAVLARWAAQAGWTFAAEHWVLSVDIPLQGQARFEGDFKTAVRELLRSIELADRPAQPCFYANQVLRVVPLAQSCDRSRG
ASA
>AHV93309.1 hypothetical protein D560_1310 [Bordetella holmesii ATCC 51541]
MDTRNFTEPLFVFVIMVVASSRPILDLVGMAVRMVARLLPVRRELATFFVLMSIVPLGGSFITEPAAMTLAALLLRDGYF
RVHGHDGFKYLALGVLFVNVSIGGVLTSYAAPPVLMVASTFGWDTVFMATHFGWRAALAVCLNAAVLTVICRQALLASSQ
GSSASSVSGVDGMRARVPALVIAVHLLFLIGVVLTAHHPAVFLGLLMMFIGFSEAYKRHQNRLLIKEGLMVGFFLAGLVV
LGGLQKWWLQDLLGGLSPTVLFWGATALTAITDNAPLTYLGSLVEGSSADWRYMLVAGAVTGGGLTVIANAPNPAGFALL
KNHFPDGSISSGKLFLAALVPTLVAAGMFLLPV
>AHV93310.1 signal peptidase I [Bordetella holmesii ATCC 51541]
MSWNFALILFVLLVVTGVIWALDLLIWRKARRRRAQAAAEQVQAAGISDPAEAERLRQDAVDQANKMPWWIEYAVSFFPV
ILFVFVLRSFVVEPFRIPSGSMLPTLQSGDLILVNKFGYGIRLPVIDKKVIDLGSPQRGDVVVFRYPVDPDVDYIKRIVG
LPGDEVAYLDKKLYINGELVPHVRDGDYFEPDRVSYVAQYKEKLGGVEHKILLDENKFQDFGPIWKFPNMENCQYLRNGV
RCKVPEGQYFAMGDNRDNSADSRYWGFVPDSNIVGKAFFVWMNFGDLSRIGRFH
>AHV93311.1 ferredoxin--NADP reductase [Bordetella holmesii ATCC 51541]
MAAFNTERVLSVHHWNDTLFSFTTTRDAALRFHNGHFVMIGLEVEGKPLMRAYSIASANYEENLEFLSIKVQDGPLTSRL
QHLKEGDSILVSRKPVGTLVADDLRPGKHLYLFATGTGLAPFMSIIKDPDVYERFDKVILLHGVRFVSELAYADYIGQEL
PDNEFFGDVVRNKLIYYPTVTREPFRNQGRITELVENGKLFEDIGLPPLNPETDRAMICGSPHMLADIRAMLDARGFEVS
AGVGEPGDYVYERAFVEK
>AHV93312.1 exodeoxyribonuclease III [Bordetella holmesii ATCC 51541]
MLRVISANLNGIRSANTKGFFDWMSQQNADFVCVQELKAQEADIAPAMKAPGPCRGYFHYAEKKGYSGVGIYTPHEPESV
VIGLGVPEIDAEGRYIELVYPKLSVVSVYLPSGSSGEHRQAAKYHFMEHFYRHLGDLIARGREVVICGDWNIAHKEADLK
NWKGNLKNSGFLPEERAWLTRVFDELKWVDVYRRLAPAATGEGYTWWSNRGQAWAKNVGWRIDYHVASNGLAETARDAAI
YKDARFSDHAPLTIDYDFTL
>AHV93313.1 cytochrome oxidase subunit II family protein [Bordetella holmesii ATCC 51541]
MIATLAASLGLSPEDPTFWMPMVFMGLLLLLIAAGIVLDGFDIGVGILLQFAPAEERGRMMGLLSPWRDANEFWPLLGIG
LLGAAFPFAWGVIMGKLYGPLVVMVLGIVLRSVAFEFRIRASTEVKPRWIFAFWVGSLLAAMGQGMVLGRIATDYQSDSG
YGWFSLFVGLCAVAAYALLGACWLVMRIDGELQRRAVSWARHGIRWTAAGMVAIAVTLGLANAGIFYKWSNAAHLGAAAG
VWVLMLLGFVVAEMLLARLPGKADRVAWMPFVLCVALYLLMLAGLAYSFFPYLILDDMTIWDGSGALDSMRLVLAGVVIG
VPVVLVFNILAYRSVFGRERRAAALLPPPG
>AHV93314.1 pyridine nucleotide-disulfide oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MNREIYDFVAIGIGPFNLSLASLSAPLRGVRTLFLDKKSGFDWHPGMLIETSTLQNPFLADLVSLADPRSEYSYLNYCKL
TNRIYSYYMRENHYLSRAEYTRYCQWVAARLPNLRFGCDVQGVLHDPESHSYLVTGQHTMSGQRFMFRCRKLVLGLGSQP
YLPACCDRRAAPFIHSADYLRHKYELQGRASITIVGSGQSAAEVFHDLLRESGRHDYSLAWITRSPRFFQMENTKLTLEL
ISPDYTEYFHDLPEARRQEILTQQNSLYKGINASLINQIYDLLDEKVHDGDNRYTLLTNSELRACRYDPLQERFQLDFQH
LDCDRPFSHATDGLVLATGYSHEIPACINPIHDRIAWNADGSYRIGRNYAIDHEGSEIFVQNTGLLSHGVTNPDLGFCCY
RNSQILRELTGTEHYRIETRTALQEFSPPADGVLKHRPARRAERRPTVAARPLMDIHRATL
>AHV93315.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MMLTGRSRLPAGPLLAALLVLTFLVLFLVFPVGTVFYTAFVNADGSFTLGHFGAFFGQPLMQEAFFNSLYVAGWSALLAS
VIAIPLAYFTVRFDFRGALLIQTLGVLPLIMPPFVGAVAMQLLFGRSGSVNLLLDDWFGITLPFMEGLNGVIFVESIHYF
PFILMNLVVALRNIDGSMEEAAFNLGSRGFRLFRRVILPLALPGYVAGTSLVFVKVFDDLGTPLVLGITNMLAPQAYLRI
TQVGLEDPLGYVISVIMIGFSILALWLSARMLSGKDYSTLQKGGSAIQKRKLRPAESILAYGWIILVLALVLSPHLGVLL
LSLASVWSYAPLPDGYTLSHYAAVFSESQGMIANTLLYCGLVAGVDVLLGTAIAYLILRTRLPARQWLDFLASAALAIPG
IVLAIGYLRTFRGVEIGGVLLTSSWVLIMIAYSVRRLPYALRACVASLQQINISLEEAAESLGASRLRTLRRVVVPLMAG
GMLAGFVTSFVTAAVELSATIMLVTRDSQAPMSYGIYLYMQSAAGRGPGAALGVLAVVAVGIGTYVSHLLVERASSRQRP
AQD
>AHV93316.1 hypothetical protein D560_2148 [Bordetella holmesii ATCC 51541]
MQIRINPDVSLTAKPETITQLLQIMQPKPLYFYTVVQHWNPGRLFA
>AHV93317.1 L-serine ammonia-lyase [Bordetella holmesii ATCC 51541]
MAVSVFDLFKIGIGPSSSHTVGPMRAALLYVQGLERDGLLPQVASVRCELYGSLGATGKGHGTDKGVMLGLMGEAPDSVD
PSAIAGMLQAVRASRSLPLLGRHPVSFVEKEHVLFYRREALAEHPNGMKFHAFDAAGSCLRESRYLSVGGGFVVTPGASN
SQVIAAHDQLPFPFRTGRDLVQMCRDSGLSIAGLMMRNELTWRDRESVEQGLDHVWQVMQDCVARGCGIGHPEADAELPG
PLRVRRRAPELYRSLTQRAERSLSDPLSVMDWVNLYAMAVNEENAAGGRVVTAPTNGAAGIIPAVMHYYDRFVASASRQG
IHDFLLTAAAIGLLYKYNASISGAEVGCQGEVGVACSMAAGALAAVLGGSVAQVENAAEIGMEHNLGLTCDPVGGLVQIP
CIERNAMASVKVVNAARMALRGDGHHYVSLDSVIKTMRETGADMKTKYKETARGGLAVNIVEC
>AHV93318.1 hypothetical protein D560_1711 [Bordetella holmesii ATCC 51541]
MNFLPIRIEKEGGMAGIVSVPRSAKIAEYTAFLIYIVVCAVRN
>AHV93319.1 hypothetical protein D560_1886 [Bordetella holmesii ATCC 51541]
MATDIPWDDFDRSKLSEEQALTIKMNAITEWAALPATEMFLRDNRGDSDFCAFMSVWFFEEQKHSLVLMEYLRRFRPDLM
PTEEELHKVRFEFDPAPELETLMLHFCGEIRLNHWYRCAASWHTEPVIQAVYRTIAQDEARHAGAYLQYMRRALHDRGES
VSGDARHAFAKIGVLMASAHRSNQAMHPTNLHVNKALFPNDTVQSRLPEPGWLEHWLDTQIRFDGQWENKVSSRILHILS
KLLDSSFESVKDLNRYRKDLSTRLVRSVRGEPDEGVLIGV
>AHV93320.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNSHEEFGKRLGRALADHRRIRGLTQEQVAERLGVEQETISRFERGATLPPLNRLLDLTDVLGVPLDAVLAGGPARHSDQ
VSDIAARLALLAEDDREWVRRWVVELCQRLARHGTPTSAALTPFSEQRADVDNIAFFWFIAE
>AHV93321.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MPGPRTLIFIHSLHGGGAERVAVDLAGHWAAAGREVMILTQAEGDAYPVPAGVHRRVLGTDGQGGDGLRGILDNLRRVRA
LRAVIREFKPDIVLGMMTTSSILAVLAAWGLPVKVIATEHTHPPSQQLSGMWQRLRRLTYPRAARVVALTGGTAQWIDRH
VPGSRLAVIPNPVHWPLPRSEPRLAPPAAPGRHYLLAVGRLHPDKGFDVLVEAFASLAGRFTDWDLLILGEGDERASLTQ
QVQAAGLDGRVHMPGRGGNVADWYEAADLYVLSSRFEGLSNTLLEAMASGLAPVSFDCDTGPGKSFAKASMGCSCGPPAR
RRRWPKRWLP
>AHV93322.1 hypothetical protein D560_2462 [Bordetella holmesii ATCC 51541]
MAAGVFGMRAAWFQAANWVSAPLWAAALLLPGWLGSSWLQ
>AHV93323.1 putative exported protein [Bordetella holmesii ATCC 51541]
MALSGASLAQSPPSGLPQAQQQGDVRFLSGGIGQGQSDAMKAAASQYRLMLTFAQRAAGGSAQYLADIPVEISNAQNKVV
LKTVSQGPYLLANLPAGDYTVKATSNGQVKTQGVHIGASGTANAIFEWQ
>AHV93324.1 putative biotin synthesis protein [Bordetella holmesii ATCC 51541]
MRDYSQAEWITLLTDAGFVLQGMTLRRLPLEFASWVARMRTPEVLMRALRDLGAIAPQPVKTHFEIQDDGSFTSDNAVIV
VYKP
>AHV93325.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MSTLSLPRLPALALDGRGLAWQLAPWLLPLLLYLLWHTGAAQGWISSQVLPPPAYVWETLRELATSGDLWLHLGASMARV
LVGFATGALLGLVLGVAMGLWRPLQAYLLPLFNALVQIPVLAWLPFVLLLVGIGETLKYILIAKAALVPVTLGTLQGFRL
ASPALREVARVYGYSRRQEVLEVVLPLATPTIFTGLRLGFTKAWLSLVVVELVASSEGLGYLIVYGRQLFQLDLVMAAVI
IVGAVGYAIDRLLDWSETLLIGAHRAGNPQGERP
>AHV93326.1 DNA primase [Bordetella holmesii ATCC 51541]
MQLRKGGANLLGLCPFHNEKSPSFTVSPTKQFYHCFGCGAHGSAITFLMEHTGANFPEAVRTLAASAGMTVPEESRSPRQ
QAESARRKAEVSRHTQVLDAAQAHYLRLLRSSPDAIAYLKQRGLTGSVAKAFGLGWAGTDRHGLAKVFDNYDDPTLVEAG
LVIESEDGRRYDRFRERVMFPIRNTRGSLIGFGGRIIGKGEPKYLNSPETPVFSKGHELYGLWEARLAIRQEGVVIVVEG
YMDVVGLAQLGIGNAVATLGTSTTPDHVKKLLRTSDKVVFSFDGDAAGRRAAWRALQACLPVLRDDIAIRFLFLPAEHDP
DSYVREFGAEAFREQMGQASALSRFLLDELASRHNLGEAEGRASCLHEAKPLLAGIPECGLKTQIERELARLVQLTPEEM
SQALAQFAAQMQAQAAARQQVQAGQMPAETVMPAVVGRSDSAVRVDEPPPDWAYEPISDADHDVYSVGAMGDGGGWHSGS
KPQAGYKSRGDWKGKGERKGDWKGRGRRDDVGGYEGRRVMPSLARRLLCLLLAHPELVDTMGDQQLEVIDHGPNLGLVRD
LIVLAQASGARHVGALMEAADPDSDLYVVLKGLRADMMAQEDLPEPLTEWNDALRRIEIDILRGDMTSLVNEGLQTEEAR
KRYAELRQRLAVLSTAGLR
>AHV93327.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MRKALAAMLFTLALPAAHVAYPEQPIRLVIGYAAGGTTDILARALAEQLSKSLKQSIIVENKPGAAGNIAATAVQQANSD
GYTLFMATVSSHGINPALYKKSLGYEAVEGFEPVGMVASIPLVLVANPKLPATDVPGLVALAKAKPGELNYSSSGNGSPV
HLAGAMFAQQAGLDMVHVPYRGGALANTAVMTGEAQLSFATLPGAMPQVKAGNLRALAVTTRERSSQLPDVPTLAEAPGF
DGFEINTWNALLAPKGTPPQTVATLNAALKQAMTSDKLKEHFKREGATPATSTPAELGTFIQAELDKWAGVVKSVNIRVD
>AHV93328.1 transcription antitermination factor NusB [Bordetella holmesii ATCC 51541]
MGAASAGAARANARSARRRAREFALQGVYAWLLRGGQGTQDAGEIDAHLRDAEDFSEADAQWFKTLLHGVLREAPSLRER
FTPYIDRPLGELSPVEHGILLIGSYELVHHVEVPYKVAINEAVELAKSFGGTDGFKFVNGVLDKLAADVRTAEVKAAAQQ
RR
>AHV93329.1 thiS family protein [Bordetella holmesii ATCC 51541]
MNGATIDMLYFARVAELLGKRAERLPLPQPANTVQLVEDLAVRYPQLSEANRLRLAVNQTHVKGPVALAADDEVAVFEPV
TGG
>AHV93330.1 ferritin-like domain protein [Bordetella holmesii ATCC 51541]
MAKSTKNSSAAPRINIGISDKDRAAVAGELAKLLADSYSLYLMTHNFHWNVTGPLFNTLHNMFMTQYTEEWGALDAIAER
IRALGHYAPGTYREYGQLTSIEEPSNVPEALEMIRMLVKGNEAVAKTARAAFEKADAANDQPTADLLTQRLDVHEKNAWM
LRSLLQ
>AHV93331.1 2-dehydro-3-deoxyglucarate aldolase [Bordetella holmesii ATCC 51541]
MPNLFRQRILARERVIGLWLSVTSHITSEMIGLAGFDWLVLDGEHAPNEIPTFVQQLQSLQGSSSAAVGRPSWNDPVEIK
RMLDIGFYNLLIPFIESEEQARQAVAATRYPPQGVRGVAGLQRSNRYGTVPDYLNTINDNICVLLQIENRAGLEAVDRIA
AVDGVDGVFIGPSDLAAALGHLGNPGHPEVQEAIRHLYERVNAAGKAVGILAPVAADARRYLDMGMHFVAVGTDMGVFKQ
AIFGLREAFPSR
>AHV93332.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MHPNTNTMLIIVCLAVALMLLGFGLRDRNLGLGLMGLGLIVALLTILYKAYITFSSFY
>AHV93333.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MIEADGIVKSFGGVRVLDGVSLTLRKGEVVAVIGPSGSGKSTFLRCLNHLETIDEGAISVEGEILARGVAGGRSEYVRDV
EVRRICRKMGMVFQSFNLFPHMTVLQNVIEAPITVKGMKRDAIVPKAEELLRKVGLLNKRDNYPARLSGGQKQRVAIARA
LAMEPDIMLFDEPTSALDPELTVEVLRTMRHLAEEHMTMLVVTHEMGFAREVAHRVIFMDQGRIVEEAAARVFFEAAQQP
RTRAFLGQML
>AHV93334.1 hypothetical protein D560_1525 [Bordetella holmesii ATCC 51541]
MGQGVLDGAPSWTPAPETEAETTIRQALQAVLDPDLGVNIVDMGFVRQVRLRDDGVAKITMTLTSPACPLAKVMTDQMRT
TLAAQDTDFEVEWVWQPSWRPADITASGREQLAAIGFNKF
>AHV93335.1 tripartite tricarboxylate transporter TctB family protein [Bordetella holmesii ATCC 51541]
MAFVGLLIAMSARAKGAADLGKEAPETPEPAGHNHAFPDIRGSVCILLGILAFLLLGEWGGLLPATFAIVFISALGDRTN
TLKQALFLSLSMCAIAVVVFWWALQLQLPLFRWG
>AHV93336.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV93337.1 hypothetical protein D560_3868 [Bordetella holmesii ATCC 51541]
MILETSAAQAVAGEVRRWLDSAVIGLNLCPFAKAVQVKGQVRYAVSDATDEEGVLQDLEAELLLLSQTDPDSVDTTLLIL
PEALPDFYDFNDFEELSERHAKAHATGGRVAGRHLPSLVSVRRDRSGRY
>AHV93338.1 kynureninase [Bordetella holmesii ATCC 51541]
MQTRDDCVAADRADILAPLKALFELPAGVLYFDGNSLGVKPRAADSRAAAVVAQQWGQDLIRSWNTAGWFDLPVRLGVKL
APLLGVQGQEVVVTDSTSLNLFKVLAAALRIQQGRKVIVSERDNFPTDLYMIESMMDFLDRGYELRLIDEQLSLEDALDD
DVAVVVLSHVNYRSGAMYDMAAVSELTHAHGGLVIWDLAHAAGAVPLALAADGADFAVGCTYKYLNGGPGSPAFLWVAPR
HHNTFWQPLSGWWSHKRPFAMADRYEPAEGVRRYLCGTQPITSLALVECGLDIAAQADMTDVRRKSLALSDLFIALVSQR
CADHPLTLITPRSQARRGSHVSFRHPQGFAVMQALIARGVIGDYREPEVLRFGLTPLYVGYADVWDAVEILRDVLDTRAW
DQPQFRQRAAVT
>AHV93339.1 phosphate ABC transporter, ATP-binding protein [Bordetella holmesii ATCC 51541]
MENTAQAAKSKIEVKNLNFYYGKFHAIRNVNMSIRENKVTAFIGPSGCGKSTLLRTFNRMFELYPGQRAEGEIILDGENL
LTSKTDISLIRAKVGMVFQKPTPFPMSIYDNIAFGVRLFERLSKGEMDERVEWALSKAALWNEVKDKLHQSGNSLSGGQQ
QRLCIARGVAIKPEVLLLDEPCSALDPISTAKIEELIAELKHEYTVVIVTHNMQQAARCSDYTAYMYLGELMEFGATDQI
FVKPTRKETEDYITGRFG
>AHV93340.1 vacJ like lipofamily protein [Bordetella holmesii ATCC 51541]
MKMQALTRLTTIAAAGAVLAGCAASQHPDPKDPWEGFNRGVYKFNDTVDRALFKPVAQGYTYVVPSPVRTCVHNVFSNLG
DIWAGANSMLQGRGHDFINTLGRFLFNSTMGIGGCIDVASMNGARKIPNDFGTTLGVWGFGQGPYLVLPFWGASSVRDGV
GLIGDWNGNQLATVGRITNIPLRNSLWGLEVVDARANLLDVTNTVDRVALDSYSFVRDAYLQRRASLVRGDRVGDDADLP
NYDDDDEDDTPAQVTPAATQPAK
>AHV93341.1 dolichyl-phosphate-mannose-mannosyltransferase family protein [Bordetella holmesii ATCC 51541]
MSTIAFAARVAARPRVYTWLVLTGVALWLMGLAWSRPLTLPDEGRYAGVAWEMLRSHSPFVPLMDGMPYFHKPPLYYWLA
QISFALFGLTEWAARLPSLLIAWASVAGIYAFTRRYRGERFALGVVGVLCTMPFFYGGAQFANMDMSVAGMITLCVLAGA
DTILRVAGGLPWRRMSLATAVLAALAVLAKGLIGIVLPGAILLGWLVMRRDGRGFKALIWPPALAAFAVVALPWFAYMQV
RYPGFFHYFFIYQHFERFALSGFNNVQPFWFYPPVLAGLTLPWSLWMGGALRRSFWGAEDSDGLRRLMLIWLVVAVGFFS
LPSSKLIGYILPAVPALAFLVTETVMPAWNRGMYRRVWASLAVAAVLCLAGILVATFNPRGGSGPLGEQVRAEAQPYDTM
VALHHFPFDLGIYTASTEPVWVVDDWSNPEIPTRDNWRKELFDAAMFEPAIGQRVLVSNATFNERVCAAPNGARFWVWGQ
PADGDNYAAIRGQSPRFVDGRRQVWLLDVSDAVRQRVCGGTPTGGSPQK
>AHV93342.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MTGPRIGFCGIGRMGDPMVRRLLAAGYEVAVWNRSAGKVAPLVGLGARKCETPAELASGVDAVLLCLGDGQAVQDVVFGQ
AGLAQAATPPRFVVDHSTLSPALTQSLAHRWAEATGGQWIDAPVSGGMAGAQRGTLAVIAGGPAQAIATVTPALMAFSAR
VTRMGEVGAGQTSKLSNQMIVATTLSALAEGFVLASRNGIDSAAMPAALQGGWADSVLLQTLWPRMVEPPEQATGTIRVL
LKDLDAIAELAADSRTVLRVLPAVRGLLQTAMARGWGDEDLSQVFRICAEESAQASQPAG
>AHV93343.1 hypothetical protein D560_0984 [Bordetella holmesii ATCC 51541]
MAERKRVRRNTLERRCLGKSFKRLFVNAPKGVFKMLEKIKRV
>AHV93344.1 allophanate hydrolase subunit 1 family protein [Bordetella holmesii ATCC 51541]
MSETQEAPTGHPDWRIQPQGDRCLLVILGDTIAEATGRLCLGLARQIRLARWPGVVDVVPSFTTVAVHYRPVPQGGLRFA
ELADRVRELLAQDIVADTRVSREVDVPVCYGGKHGPDLAQAAQSCGLTEQELIALHGQAGSMVYMLGFAPGHSYIGVHDE
RLNLPRRDSPRTEVPAGSVAIANRQTVIYPNRLPGGWSIIGATPLVMFDPAREPASLLQPGDRIRFVPIDEVTFDRLRAE
QP
>AHV93345.1 potassium uptake protein [Bordetella holmesii ATCC 51541]
MALVMGALGVVYGDIGTSPLYTLRACLTGFADLEPAHILGVLSILFWLLMVVVSLKYVTLILRADNQGEGGTLALLELAV
RGRSGRMRMFLVILGIFGAALFYGDSMITPAISVLSAIEGIGVVSHTMDRWVVPAAIVVLVALFAIQSRGTGAMGKLFGP
VMALWFGTLAVLGGWQIWQAPQVLAALNPMWGLRFIVEFPLMSFLLLGAVVLALTGAEALYADMGHFGRPAIRRAWFSMV
LPSLTLCYLGQGALLLRDPTAIRNPFFLMAPEWGLVALVALATVATVVASQAVISGAFSVTRQAVQLGFWPRMQILHTSA
AERGQIYLPQVNALLLCAVLLLVLAFRNSENLAAAYGFAVTGTMLTTSVLAFAVLPRGSTGGRRLAWMALLGVLLLIDIL
LFGANIFKIHEGGWMPLLVGVIVFTLMMTWRRGRLLLAQLQARDRQPLNEFMEQLETYPPARVPGTAIFMTMNSGNVPPA
LLHNLKHNKVLHDHVVFLSIRVSDVPYVADDGRFDVTQVSASSWQVIIHYGFKEDPDVPEALREVAEAYPEIDLEPMRTS
YYLSRQTVVSGKRSAMSRWRRAVFSFMARNSTRSTRFFKIPPNRVVEMGMQVEL
>AHV93346.1 periplasmic binding domain protein [Bordetella holmesii ATCC 51541]
MRALQASHTQALLVALRGQDLITFSKLVLQLPTLQQLPAIILHGEDLPDRAPAGWIVATHGALNEQDGFAIEYGARMGHP
PNLAALQGYVALHSLVAALRTAQSADPEKLTDAFEGLRVDSAVGPILYRKADHQSTMGLSLGVWEEKGSSRNSVEPCLIA
VTLDP
>AHV93347.1 azlC family protein [Bordetella holmesii ATCC 51541]
MIGYFPVAVAFGIAASGVGLAPYQVILISTLVYAGASQFLLLASIKAGTPWIWVVALCSVLNARHLLYGPILARLLPPSL
RTRLRLAFLLTDEVFATALHQLAEVSPAQRGRWMAALGLAAWLTWIAGTAVGVYAGDGLEQHYPVLSRVMRFALPALFLA
LVCQTAKRGLLRPLLAGFGVSALLTAGGFGTLGILLGALAGCLCFRKEKA
>AHV93348.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
METVLLTGAASGIGRATARQLARSGQRCVLVDRNAQALQTLADELGGPHLHRVADLTDAQQIAALAHDMPALDALINNAG
MTDDSNLPVIEQNPTGWQRLLDLNLHAPARLVQALDGRLLAGARIINVASGAGLRAIPWRGAYSPSKAGLIAQTRAMAAA
LPAYRFTVLCPGFVRTELVANLIDAGRLDPARAVAKIPLGRLGDPQDLACALSFLASAEAAVLPADMLCVDGGSSIFGGS
QAYLPTPHLPVACDTPLALRVHGPWQGPREYGTQGYPAVLDTRVLSAAPGQRLAAIVQAASQAGLQGAASLTLLLPRDPH
TCWQTAGERGAARMLVSTLACEWGPHATRVNALEIAPDSDVQAYLPLVRFMAGAQAQYLTGQTLGSP
>AHV93349.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MAQPALSQHVAALESELGITLFERRAKGVTLTPAGERLRQRASSILAQLDALKIDVPGPPGKPRGPVRVCLSRSLARVLV
APLLRHVERELPDVRLLLSSALSSEMRTALETRQLDVALMPNAFELPGLDCTPIYEEGFSLFGRASLFERAGKTIAFSAI
GSRPLVAPDRDHDLRRLIERTAIDLNCPLNVKYEINDPDLNYALVREGLAFAVLPASAGLDLGKHDRHIEERKVVRPAIT
RVQSIVRMPGDAQAAASQAVGQALIVVMKDLVKSKLLTGRIIAQP
>AHV93350.1 mce related family protein [Bordetella holmesii ATCC 51541]
MENRSHALLAGVFTLVLLVAAALVAIWVGRDRSTVKVYDIVSSASVSGLTAQSTVRYQGVPVGKVQSLMLDAHRPGQVRI
RIGVSPNTPITASTWAEVGVQGVTGQATIELRDNGGSTELLVARGDQPPDIPLRPGLFDRLEQRGSALLAKVETTAEELR
HLMSPANIEALSLTLKNAADISSQLKDASRDLAPAMRKLGPLVDSMNKTSSEAAALMQSANQSLARLNAPDGPLSTAGRS
LQEIARAAARLDRETLPAMTDMAQSVTGAARSAQSALRRVGDTPQSILFGPRLSSPVRASPVLPDLGDKSMKRICLMAVL
ALVLGGCSVGRVAPQAALFDLGPEPTASVQLPARAPIVLAFSAAPSLSDTGVIWRVADSTAPKAYAGFRWSEPPASLVRQ
RLQERLSHEGAVLSDGGGTGAPQLRVTLTRFEQVFAADGSSSQGQVVLQAVVLQDGKILGQRRFAAEAAAPSQDASGGVA
ALRLATDSAAESLAAWLPTVLRPIAR
>AHV93351.1 dehydratase family protein [Bordetella holmesii ATCC 51541]
MKDLHKHRSRIVTEGVTRTPHRAFLRATGLDDEAIAKPFVAIVDTFGENTPCSMSLNQISDNVRLGVAAGGGVPIRGSAI
SVSDGTSVNHAGMRFSLVSRETIADSVELFVRAHCYDALVGVAGCDKTLPGILMGMVRVNVPGVFLFGGAMLPGTLPDGT
QATILTAIEAVGTAQQGKMSAETLAGIEKRCTPTAGSCPGQFTANTMAMVAEVLGLAPLGSAMVPAVYSERIAIARRAGE
NVMRTLRGGGPLPRDLVTRKSLENACAAVAATGGSTNAMLHIPAIAHEAGIRFTLDDVSEVLARTPLIGDMQPGGRYLAV
DLHNVGGVPAVLNALLAGGHIHGDTLTQSGQTLQEALQAFPGPDGRVVKPHDEPLSPNAGLVVLRGNLAPDGAALKTAGL
KQLVFSGTARVFETEEDCMAVVAAQGYQEGDVLVIRNEGPKGGPGMREMLSVTAAIYGQGMGEKVALLTDGRFSGATRGM
CIGYVGPEAAAGGPIRLLRDGDRIHIDALKGRLDVQLSDDELAARAAQVHPFVRGRLGGVLEKYEALVRPAALGAVTHSG
AVDWPYDTPQEPGSPAGDGAR
>AHV93352.1 hemin import ATP-binding protein HmuV [Bordetella holmesii ATCC 51541]
MTLHAHQVTLERGGERVLTDVCLTLMPGQMLGLLGANGAGKSTLLACLSGELTPIAGSVDLNGRPLAQIRAGQQARQRAV
LPQKPSLSFDLGVHEVVAMGAYPFIELSTQQVNELCDSCLQQAGVSHLAQRRYLELSGGEQQRVQFARVLTQCQAAPDGT
PRYLMLDEPISNLDPRHQIDLLRTARNLAREQGVGVLVIVHDVNLAAQWCDRIMLLTDGTRVAEGSPAEVLTPANLYDVY
GVQADVLPHPKQPGALLVLMH
>AHV93353.1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein [Bordetella holmesii ATCC 51541]
MTSKHRIIQVGSLAGSPTANARLAASYDVIELWKHENRAAALAEFGPGVTALVTSANLGARADLIAAPPDLKAICSWGVG
YETIDVQAPRRAAFR
>AHV93354.1 hypothetical protein D560_2758 [Bordetella holmesii ATCC 51541]
MAAAVELGYQARSRAEQALHHWMDPVPAAPSAAPQVGWTPQSAHWPSLHEQAENTELELMANNPYGVRQDYLDTFLRHLT
PERMNAYSTGYDPAAELADLERLMALLAQHHVRSLLVLQPLNPLVYRDLDRFEPARQHLLALCTRYAMPCMDMYGALPYA
VGTLRDGQHLGELGWLAVSRKITEVMGQ
>AHV93355.1 alkylhydroperoxidase AhpD family core domain protein [Bordetella holmesii ATCC 51541]
MLDWDDYRKDLKTRIAELGVLSPGTLSGYQMLAGAAGKTAQLDGKTRELIALAVAVTTRCDGCIAVHAAQAGREGATKEE
IAEALGVAVALNAGAAMVYSARVLDALSD
>AHV93356.1 hypothetical protein D560_0878 [Bordetella holmesii ATCC 51541]
MSASTTPPAVDPQVLGDLALNAAHIALFAMRQQKPQEALGVLEDVADSLLQYLSKSLELPADQKAAAKRRITETLHLALA
VTKGSKI
>AHV93357.1 hypothetical protein D560_2479 [Bordetella holmesii ATCC 51541]
MHGLQAVSHIRKRPPDDYAHRVIEVTAAHLFFQRYRKRLLGKGIHIYSDRIVCKEEPGPGKRGTRPGKQKILSFDCN
>AHV93358.1 H+ antiporter-2 family protein [Bordetella holmesii ATCC 51541]
MPAEPASAASSSLTDPKAARAARMIPFIVGCALFMQMLDSTVVATALPAMAAALGSTPVRLNVAITSYLLAVAVFVPISG
WAADRFGARRVFVSAIALFALSSVACALSQNLAQLVVARVVQGLAGAMMVPVGRVILLRTVPKQDLLKAMSFLSIPALLG
PVIGPPLGGFMVTYMSWHWIFLINVPIGIIGIYLVLHFVEEIRMDDTPRLDGIGFILSSVCLAGLVSGFEALGHGLLSPA
MLALLLIGGLACGVLYLWHARRVAYPILDLTLLRIPTFAISTLGGNLCRFAVGAVPFLLAMLLQVGFGLSPFEAGMITFA
SAAGALLMKFVATPIVQHFGFRRVLTINAVLTGLFIMCCALFTPQTPVWLMILILLIGGFFRSLQFTGVNTLSYADIPAE
KMSRASSFSAMAQQLGISLGVGVAAITLNLSMRVRGDDHLAVPDVIVAFVTIGVLCALSTLSFRRLAPDAGAQLNRNKVQ
RDDE
>AHV93359.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSNTPDVLTDCVADLAWGLLISAARRMGQGERFVRAGQWGQVHGSIPLGMRVSGKKLGVIGLGRIGEAIARRGLGFDMQV
RYHNRRERNDVEYGYAGSLTELAEWADFLIVATVGGPSTRHLVSREVLRALGPKGIIVNIARGPVIDEAAMESLLESGEL
GFAALDVFEHEPNVPDFLKTTDQAVVLPHIGSATTETRLDMENLMLDNLAAYFATGKVTTPV
>AHV93360.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MGLAAIAVVLSGCASKGLQERDVAGVSETFVVNADPMAALRRASEYVRVCHEVRAHPYGVVYAGKRSVGDRGLPNEILVH
KETEPAKILERINTQPAEFANQAQVTVTVLAEGVWDTAEIAAARRSIESSTPVCRAQQ
>AHV93361.1 lipopolysaccharide-assembly, LptC-related family protein [Bordetella holmesii ATCC 51541]
MKDRFPALIALFLLACLVVGTWWAADYAQRAIPIDPPRRITHEKDAWSHHFVMLRTDPEGKPINRMEGVYGEHFPDDDSY
HVTSPRAIGQRPGNPITVGTSKTAIMEQGGKRIVMNGDAHVLRNADANNDRLDVRSQQLILLPDDDIVLTDLPAQVIKGN
SRMNGTGMRYNNKTRQLEVHSATDVEIAGGAGRKQAPAPANTNQNKP
>AHV93362.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MRSLYIDACLVPGMPDDCAVLEVTPLMRELVLRISLTPPSSSTDHELLSTLLVNEMPRLAPRGFDLPLPESAALRALCQA
LMADLSLAPSPDQAAARLGVSARTLYRRFLDETGLSYIRWAQQARLLEAVRRLAEGQSVTTVALDLGYQSPSAFTAMFRR
QLGRPPRQWR
>AHV93363.1 peptide deformylase [Bordetella holmesii ATCC 51541]
MALLPILRYPDPRLHKVAKPVAVVDDRVRQLVKDMAETMYDAPGVGLAATQVDVHERIIVIDVSEDGKDLCVLINPEITW
KSEELQVYEEGCLSVPGVYDEVKRAARIRCKALDAQGQPYEFEADGLLAVCVQHEIDHLDGKVFVEYLSVLKQNRIKTRL
KKAEREALRA
>AHV93364.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MATLSFRNVKKTYAGNVPVIHGIDMDIKDGEFIVIVGPSGCGKSTLMRMVAGLETVTSGEIIIDGKPVNDLEPAERDIAM
VFQNYALYPHMSVFENMAYGLKIRKVPKAEIQKRVEAAAQILELGKLLERRPRQLSGGQRQRVAMGRAIVREPKVFLFDE
PLSNLDAKLRVAMRLEILKLHRRLNTTSLYVTHDQVEAMTLAHRMVVMYQGVPEQIGTPMEVFDKPASTFVAGFIGSPPM
NLIEVDVAGDGTMQTLEGTALQISPLQVPQSVRGRKVVMGLRPEHMLLNAEGIPVVIEMIETLGSEQLVHGRNGKNMIVV
RCTTRQLSESTIRVGDTMSIGPDGRHDLHWFELDSGRRVAGL
>AHV93365.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MLSRRQLLLASAALPLVRVARAASPWPQRPLRLIVTFPPGGASDIAARLIAPALAEHLGQSVVIENKPGAGSTLGASLVA
QAPADGYTLLMSNSAPLSISPALMPARAYDPIKSFRHIAYVGAVPTAFVVRPDVPVSTLAELTAWIREQPQAVQYGSGGL
ASVGQIVGELYAQQARLRLQHIPYKGSGAMRNDLLGGQIRVAVDALPQNLPFLRSGQLRLLAVTTAGRVPQAPDIPSVGE
LGLPELIAENFVGISAPAGVPEEVVQRLDQATTHVLADAEIRSRLQAQGFVLDRKSPAEFSAFVSRQALAWEPVVRQSGA
GL
>AHV93366.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MIQPIEIVATVLFAVAVLHTFSVPVFARLAHRDGAHAGLWHLLSEVEAVFGVWAFALIVIMAAM
>AHV93367.1 SURF1 family protein [Bordetella holmesii ATCC 51541]
MGRYDFGRQTLVKAVTEMGDGYWVMTPLLRDDGSTILVNRGFVLPAWRQPPQESEDIVVTGLLRMGEPPWGFLRRNDAAA
GRWYSRDVRGIAQARGLGAVAPYFIDSDATPGAVNPSRQPADGLTVLRFADHHLVYAITWYALAGLVMAGGIMIARDEKR
LRARLAVSGPAPSYDPPLPRR
>AHV93368.1 hypothetical protein D560_3313 [Bordetella holmesii ATCC 51541]
MDINLNDFEQIRHELARPLLLVKGGNGVLACGYLNIATFDKTGEAAAIVTGVSDHTQMLGAPLIAVSQAARALGLQEGMT
GAQALARFK
>AHV93369.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MTKSTGKTSSAIEAADASSTTASKRAVSMAAEKAPAKTAVKVAKTATKTAAKKAAKPAAAAGEKTTKVRAKKAEDKLADL
VGAPAAGRVPSGRRPGRPAKNANNDSDSFDDAMDGEGEVVPDFKPAKRGGKRGKGDPKELLARGPVSPEEYEARRNRLKQ
LIKLGKDRGYLTYGEINDHLPDDLVDAEAIDGIISTFSDMGISVYDQAPDAETLLMSENAPVASNDDDVEDEAEAALTTV
DSDFGRTTDPVRMYMREMGSVELLTREGEIEIAKRIEDGLKHMVMAISACPTTINEILAHATRVRESQAQIDEVVDGLVD
PEDGEEYAGAGVSADEDEGDDGPAGGMSSKQLEDLRVKALAKFDEVSKQFDRMRQSYEKDGYRSEIYVTAQETIQNELMG
IRFTAKMVEKLADTLRNQVEEVRQLERAVLHTCVDRAGMPRSHFLKVFPGNETNLQWIIEEVAAGHPYAETLERQIPAVQ
ELQQKLIDLQTRVVLPLKDLKDVNKRMATGEAKARKAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGAEPDPATLAQKMDMPEDKIRKIL
KIAKEPISMETPIGDDDDSHLGDFIEDTSTLAPSDAALHGSMRDVVKEVLDSLTRVKPRFCACVLVSK
>AHV93370.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVEWVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93371.1 hypothetical protein D560_3744 [Bordetella holmesii ATCC 51541]
MQPSAAPYAADSGGIRILPASSDSLAAAQRFLHTRGLDQHAWCDSAADGSGRIRARADFAARHLPEGDTTSLVQSLGLDT
GGDADLEQEIVLAMLACPVAFPFPDVAELEAAIRVRRNIVRAATRTALAFDTEQAERPAQYWTYDEATGFTILPGRSLIE
GLTLATQPQVSGQTYAFSCYRATEYVTVLGIAQELQQSNPELHARLQRQWETRAVMSGRFHDAFLREYGSLDDPLPPRFY
VPGDRLWFRNPDPHSSNVEGYEGSWVFYLGSGLFNNFWKRDQPYTLTHKCLEIFHWRDGARLDAEGKLFIDEDIVEASVA
QTKADPAACQAVLQRMLRIRDPQGVYAEGGCIDATRECARWVLPGHADIALPEFPQALS
>AHV93372.1 hypothetical protein D560_3562 [Bordetella holmesii ATCC 51541]
MQCWLIGACLAGSLGVAQAQMAEPAASAKPAARSAIVVDGNGWLGASDQERRAFLVGVANMIVAENAYAKRRDQAAPGAA
KAITDALSGMNLWQWSERVTAWYRANPDKLSTPVMGVIWRDLVKKSH
>AHV93373.1 hypothetical protein D560_2912 [Bordetella holmesii ATCC 51541]
MCPHMSPDDDAEDLDLRAHYRSPPPLSPQFAAAGAAVRRPHGTWHPGWGIAGSVVVVFGLLVFTDYSNLDNSATMDEEDV
VAQSEAPDDSLSQPPVLGSHAAAPPPALPASLTTPQNGSPIRLRAVPPPAGPDGTSRIEYIRNLLRGNQREAALVQLAAL
HRDEDDLELPPDLQALLAEAETLPEPDHTEAGVTASKPAH
>AHV93374.1 hypothetical protein D560_1924 [Bordetella holmesii ATCC 51541]
MILYEYPFNERIRAYLRLEYLFDRLAFFAREGDARQHQVAVTSLFDILDACERTDMKGAVLQDLERQRMALNGLRDHPSV
DQDALEAMLREIDSVFGALSVVGKTGQGLRENEWLASLRGRLAVPGGATQVDMPSYYAWQNKAEAVRLADLQGWMQPFQP
LQEGLSLALRLLREAGRRSDALAEQGAYQQMLGGKTFQLLRVWVDPQTGCFPEISANKYMVWIRFSTQDGDLKPQQLGRD
VDFKMSLCSA
>AHV93375.1 hypothetical protein D560_0219 [Bordetella holmesii ATCC 51541]
MAKPASDMPPYDKAAALRGLAGARRVALLMAPRLGDTLLMMNMARNLAAHGREVSIFGDYIHGLRDWFPGLDIRPSLSEE
QAGQVLPGYDCAAQMHVGWPYALHAHQPNYFYYDAHVAITGRGFVKLFQIRDFCREQLGLAQAGADNGLRPPPQVQPHRS
HPRRVALHPTSTGPSGAGRRAISRSWGCACCTRATSRTTSSRRTSGPSGAGCWTMACICPSFPLCPRWRASSMPRAGSSA
TSPASATWLPTWACPPCR
>AHV93376.1 orotidine 5'-phosphate decarboxylase [Bordetella holmesii ATCC 51541]
MNFLQKLEHAWATRNSLLQVGLDPDPLRFPHELQGKPDAILEFCRGIVDATAPYASSFKPQIAYFAAHRAEDQLEALCAH
IRSEHPDLPIVLDAKRGDIGSTAENYAREAFERYQAHAVTVSPYMGLDSVEPYLAWRDRGVIVLCRTSNPRGSDLQFLQM
ADGKPLYLHVAGLVAEKWNRDGQCGLVVGATFPNELAAVRQRIGDSMPLLVPGIGAQGGDINATVQAGANQARTGMMINS
SRAIIYASNGDDWREAAAKAAAGLREAINAVR
>AHV93377.1 3-deoxy-8-phosphooctulonate synthase [Bordetella holmesii ATCC 51541]
MTLSIHITDTIRCANESPLVLFGGINVLESEDLALNACAEYVRVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEAGMRI
FEKVKAEFGVPVITDVHEPWQAPVVAEVADVLQLPAFLARQTDLVVALARTGKVINIKKPQFLSPSQMVHITEKFREAGN
ETLILCDRGTCFGYDNLVVDMLGFDVMKKTTGGLPVIFDVTHALQQRDPGGAASGGRRQQSAQLARSAMALGLAGLFLEA
HPDPANALCDGPSALPLAQLEPYLAQIKAIDDLVKNLPPLCIE
>AHV93378.1 tat (twin-arginine translocation) pathway signal sequence domain protein [Bordetella holmesii ATCC 51541]
MQRRSFLKKAALGAGGAVVAAPVFAQDAPVLLWRLASSFPSQSSIIYAAAGDFARYVHQATDGRFSIDIVPVEQDVLSAV
GDANVECGHTASCYYYDLDPSLCFDGAVPFGLNTRQMNAWMRQGGASICYVGGFVSIASSTSLAVIPVRRWADGFATKSR
AWGISTV
>AHV93379.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRLAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93380.1 UTP-glucose-1-phosphate uridylyltransferase [Bordetella holmesii ATCC 51541]
MKTVRKAVFPVAGMGTRFLPATKAMPKEMLPVVDKPLIQYAVEEAVAAGITDLIFVTGRNKRAIEDHFDAAPELETDLEK
KGKTELLALVRDILPPNVNCIYIRQSAPLGLGHTVLTAAPIVGDEPFAVVLADDLIDADTPVLSQLISCAAEHQGSVLGV
QEVRREDTRKYGIVAASAVAPRTERVSHMVEKPAPEDAPSTLAVVGRYILEPQIFDHLRATKMDKSNEIQLTDGIAAMMR
ERAVFAYRYEGRRYDCGSKTGMFQATVAIGRKYHGLTPE
>AHV93381.1 transcriptional regulator, AraC family domain protein [Bordetella holmesii ATCC 51541]
MNQPLTRPKQESALPAKNLIARANCSDVVEQADALPFWQQDYTQLSAGSFRGSVDSVSMPNLQVFRESMNRAVDEQAYAP
QGT
>AHV93382.1 hypothetical protein D560_1709 [Bordetella holmesii ATCC 51541]
MQQALRHAASVGPAYIAALAPQPAAHGWVAERQAIGAYGSAYLKRANMAWRQPGVELAEDVLVLRLASDADGLPIDAGKR
YVLRFEPDELPPGDGFWRLAAFDARGQPLADAPRRQSVGDRDPLRFNPDGSLELYLQEAPPPEADRDNWLPLSGPDVNIL
LRVYLPAAAALDGRWNPPALRAAQPISTPDGTATQQ
>AHV93383.1 sensory box protein [Bordetella holmesii ATCC 51541]
MFSPAKSNIPNSFHDHARSRRRGLYWVTPALVLVLYICVMGMFFWLQRIHDDSVMFVTIDQELRQQRLLWVVLALSIVII
ISLLMLWRYTRFRSTAEAALIAETGFRRAMENSMSTGMRVLDMEGRIAYVNPAFCRMIGWNEADLIGRSPPFPYWVPGRH
EQHQHTLDVLVSGKTPSSGLEVEAQRRDGSRFTARMYVSPLLDPNGTQIGWMTSMTDITEPKRIREALTAAHERFMTVLE
GLDDAISVTADTHDGLELLFANRTYRRVFGAQTGGHDELLAGRRGRFTDESVEVFAPSVQRWFEVHHRMLAWTDGRRVRM
QVARDITERRTHEETSRLQQEKIQITSRLTTMGEMASSLAHELNQPLTAIANYSMGAVALVKAGHTSPTMLLPALEKAAA
QAERAGKIISRIREFVKRSEPRRQRVPIGRIVDNAIGFAEIDARKRRIRIDSFVPSTAPDVMADPILIEQVLLNLLKNGL
EAMEGSTSDELKVAVIPHDNLMEVAVVDRGHGIAEPERLFEPFFSTKSQGLGMGLNICRTIIESHHGRLWADPNPAGGTI
FRFTLPCAAPEAPARNDQSEELHA
>AHV93384.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MAAVLPWGVLHAQSAPATSDNSVTLGSIKVEASADASAAGLAPAFDGGQVATGSRAGILGTRDNLETPFSMTSYTSELIK
DRQARSVADVLQNDPGVRVARGFGNFQESYFVRGFLLSSEDIAYNGLYGLMPRQYIASEFFERVEVLRGASNFLTGTPPT
GGGVGGAINLVPKRAPNEPLTEFTTGISSGGAAQFSADIARRFGPDDSTGIRINVGQRGGESEVDGEFGRTTAALVGLDW
HNDRARISADIGYQYNRIKRGRPNVSLAGTATSVPDAPHSSTNYAQDWSYSNERDVFGTLRGEYDLTDTLTAYAAYGHRD
SKEINSLANVNNVDSSGNGNFYRFDNVRKDKVDTGEIGLRAKLDTGPVKHEAVLAASYFELEKKNAYAMDYANTTATNIY
SPVHSPKPAFSAATLFGNDLGDPALNGRVRMTSVALGDTMSVLDDSVLLTLGLRHQRLYSRDFAYNTGVGSKAYDESRNS
PAAGIVWRVTPEISLYANYIEALTAGDTAPANSNGLPVTNAGAMLRPYVSKQKEVGVKLQRDGIGAGLAFFSTDKPRSFV
NANQQFTESGKDRHQGLELTWYGQVAPAFACWVA
>AHV93385.1 bacterial transcriptional regulator family protein [Bordetella holmesii ATCC 51541]
MSVKTALRVIEIIETYAREKRALSLSEMARLLDVPVSSCLALIRTLAELGYLYETGRRQGYYPTGRLLAMAQRIARADPV
LDRVYPSLLELREATRETIVFAKLDALSRVVYLEVLDSPHTIRYAPVAGEFREVHANSLGKALLSQLPPEQRTGLLTRTP
LTRFNARTLVEPDAVEADLQQSRQRGWFSNISESIPDVGAIAWPLSLSGENYSISVGGPVYRIEPQQAAYASILRSACTA
LEQNH
>AHV93386.1 flagellar motor switch protein FliN [Bordetella holmesii ATCC 51541]
MTDTNQRPDQAGAGAASSAADDWADALAEQSRSVTPTQADGLRGQDEWASAMAEQAAAVPKAAPAAQSAAHTVFKPLSEK
SSAGAADIDLVMDVPVQLTVELGRTRLTIKNLLQLGQGSVVELDGLAGEPMDIFVNGYLIAQGEVVVVEEKYGIRLTDII
TPSERINRLNSRR
>AHV93387.1 cell division protein FtsA [Bordetella holmesii ATCC 51541]
MTRDIKDLIVALDIGTSKVIAVVAEILPEGRFEVLGLGQHESRGMRKGVVVNIETTVNSIQRALEEAELMADCKIRDVYT
GIAGSHIRSFNSSGMVAVKDKEVTATDVARVIETAKAVNIPTDQQVLHVLTQEFIVDGQEDIREPIGMSGLRLEVRVHIV
TGAVSAAQNIVKCVRRCGLEVQDLILQPLASSLACLTADEKELGVVLVDIGGGTTDVAIFTGGAIRHTAVIPIAGDQITN
DIAAMLRTPTPDAEEIKLRYGVAKQVLASPDETVEVPGLGDRGPRQVKRQALGAVIEPRVEELFSLVQQVVRDSGYEDLL
ASGVVLTGGSAQLPGMIELAEDVFLKPVRVAVPEYEGSLADVMRNPRFSTVMGLLQEARMQRVRGRKVAAQTGNFKSLLA
RMKEWFMN
>AHV93388.1 NADH-Ubiquinone/plastoquinone (complex I), various chains family protein [Bordetella holmesii ATCC 51541]
MIDWQQHLPIYPIVVPLLAGAVMLLLADTRRRERAAIAVVSTLLQLASAIALLYLASGANGVWPDGIGVYLPGDWPAPFG
IVLVVDRLTAVMLTLTATLGLATLIYSLARWDRAGVHFHSLFQFLLMGLNGAFLTGDLFNLFVFFEVLLAASYGLLLHGS
GATRVRAGLQYIAVNLVASFLLLISIALIYGVTGTLNMADLAVRAGTLVGADRSLFEAGAAILGVAFLVKAGAWPLNFWL
VSGYGSACAPVAAMFSIMTKVGIYALLRIGSLLLPTGAPSAFSLDWMFAVGLATLCFAGIGILASQQMEKIAGYCVILSA
GTLLTALGMPGVTLTGPALFYLISSVLATGAFFLLIELIERTRSFGANVLAVTMDSFDLDDPAAPNRSDDVVGVAIPAAM
AFLGLAFTACALLVTGLPPLSGFVAKFSLLSSAVSAANTSAPPLDAWLLVAGVLLSGLAGLMALGRTGIRVFWSSEDRTT
PRLRVIEAGPVAVLILLCVALTAAAGPISAYLDAAAQSLDTPTAYIEAVLSKQPVRVIGEGH
>AHV93389.1 tol-pal system-associated acyl-CoA thioesterase [Bordetella holmesii ATCC 51541]
MSQPTSAESTLSVRVYYEDTDAGGVVFYANYLKFFERARTEWLRNLGVDQSRLAREEKRLFVVQSLEMAYRLPARLDDLL
TIRSRVTRLGRASIHFAQRAERDGELLAEGQIQICCVDSERLRPAGLPDFLRALLEFTQE
>AHV93390.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MSFARLIGRLRYGLGLASILLPLAAAHATWPDRPIHLVVPFPPGSSPDLLARTIAEPLSQVLQQSIVVDNKPGAGGNIGT
RLVAQAKPDGYTLLYTINGPLVIAPTLYKRTLGYDLLTDLAPITLVATSPNVLTVPSTLGVDTVQEFVKLAKARGGAWNY
GSVGPGSSAHLAMEMFKQEAKIDLTQIPYAGFPQIISAIIGGDVQAGFMVPAIAMPQAKDGRVKALAITSLQPSPALPGI
PTMASQGYPGFEAISWNAILAPAGTPTPIIERLNSELARIIDSEAVRKQMLLQYFTPAPSTPQALTQRMREEKARWDKVI
ETLNLSLD
>AHV93391.1 aminotransferase class-III family protein [Bordetella holmesii ATCC 51541]
MEFSQLNVNNLMEITSRPDLVFVRGQGSWLEDQAGKRYLDFVQGWAVNALGHCAAEMQQALHTQAGLLMNPSPAFYNLPS
LELAQRLTAGSVFDRVFFANSGAEANEGAIKLARKWGRVHRNGAYKIITMDHGFHGRTLATMSASGKPGWDTMFAPQVDG
FPKADLNDLDSVRALIDAQTVAIMLEPIQGEAGVIPASREFMQGLRKLADEHGLLLIVDEVQTGMGRSGTMFAYQQFDVV
PDIMTLGKGIGGGVPLAALLARESVSVFSHGEQGGTYNGNPLCTAVGVAVYDVLAAPGFLESVQDRGRQLSEGLLALSQK
FGLCGERGMGLLRALKLDGDYGPAIVEAARQLEPQGLLLNAPRGNLLRFMPALNVTEAETATMLEQLDHLIATVRK
>AHV93392.1 lipid A export permease/ATP-binding protein MsbA [Bordetella holmesii ATCC 51541]
MGSYWKGLLLAVLLMAGAAATQPTLAVIMKPLIDGGFAGDKPQYIWSVPLAVVGLIFIRGVCNFFSDYLLAWVANNVLLG
IRREMFDRLLGLPDADFKRGDTGRLLNRFTIDAGNVTGYATDVITVLVRETLVVISLVCVLLYMSWLLTVIILVVMPISV
WIARSFARRLRRINRETVNMNAELTRVVSEGIDGQRVIKLFDGYDAERGRFAYVNARLRRFAMRTAVADAALTPLTQVCI
AISVGAVIAVALGQANAGALTAGAFAAFMSALAQIFDPIKRLTNLASKMQKMLVSAESVFTLVDQIPEVDDGPRQLPEPV
RGKIEFRQVGHRFPDAHRDTVADVSFVVEPGQTVALVGRSGSGKTTLVNMLPRFVLPTEGGILIDDVPINEVQLRSLRSH
LSLVSQDVVLFDDTIAANVGYGALGQADDQHVREALAAANLQDFVDGLPKGMHTPVGENAARLSGGQRQRLAIARALIKN
APILILDEATSALDNESERQVQSSLERLMRGRTTLVIAHRLSTVQNADRIIVLDAGRIVEQGPHAVLLAAGGLYATLYNM
QFRDD
>AHV93393.1 hypothetical protein D560_1692 [Bordetella holmesii ATCC 51541]
MARQKQRHHQTYWSAAGYYNGNMIAFRHACLHPSIWLFAQLYAPLVAFATK
>AHV93394.1 hypothetical protein D560_1162 [Bordetella holmesii ATCC 51541]
MIVRLIVAFLLAIAPFWFGEGGRAFASEPAVETIDPIIQDGRLAINADVDFPLNDQLRDAAQRGLPLYFTADIQITKARW
WWFDRSLVDTSMTWRVSYNALTRQWRVGQGELSLNVASLDDAMDVVRRIRDWRLADSSEFEAGEVYTGQLRVRLDTSLLA
RPFQVNALNSSAWAASTPWREFSFTLTAPARDPS
>AHV93395.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93396.1 bacterial regulatory s, tetR family protein [Bordetella holmesii ATCC 51541]
MAGVRQFDEDLLLDQALAVFWQHGYSDTTMQELAAATGVQRGSLYNAYGDKETLFLRVFERYRAYWVDATRRVLEAAGAR
DALDGFLCLLIGSLTNETPARSCMSTKTAMGPDIDDPVIRDALTGLLDDLETLFVQRLASAAPELRLPPPEAARLFITAT
RGLVVIERLYRDRARLRQTADTLLDALFN
>AHV93397.1 phosphoserine phosphatase SerB [Bordetella holmesii ATCC 51541]
MTVLTLGPGLSLRDPYPRPRLRDFKLIAFDMDSTLLAVETLDELADLAGCKAQVAGLTEAAMRGENPDYKASLRQRVALL
AGLPESALDVVWRERVRLNPGVQALIAACKSAGLRCILVTGGFTCFTDRLVRQLELDDVRANELEIVQGRITGRLLPQSW
GDICDGEEKRRKVLQTCEAMGIAAGQAIAVGDGANDLAMMSVVGLSVAYHAKPTVRQQARVVIDQGGLDRLLEVFEAV
>AHV93398.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MSTQSNKGGRSLILVSVLSLIGFLLVWEALCRGGAVDPIFLPAPSQVLARAMSMSDQGALFYNVLASARRVMVGFIAAIV
VAIPLGILLGTSRVARSVFDPIISFLRPLPSMSWIPLSLLWFGITETQKYSIVFMGSFVPALLYVMEATRSIDPLLVRAA
RNLGANRWQIMREVLFPGCLPQIISGMKIILGLSWTCVISAELVASKEGLGFMIMNGKEFFQTDTVVLGMVLISFTVLVT
DLCLRLLERWILFQQYALFPWRTV
>AHV93399.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MACAHDLPFVWQPTMQAWNAGYITEVPYTYGYYRELNPLWLRFVMGLAGYRFPTSGHACELGFGQGLSINIHASATGWHW
HGTDFNPAQVAFAQELARAAGHPATLCDDAFEEFVGRPDLPNFDFIALHGIWSWIQDDSRQAILDLIRRKLNVGGVVYLS
YNALPGWAPMLPVRHLLASHARSNGGPLRERAQQALDFCERLLATDPIYQQIAPLIKERVPALRDHPIEYLLHEYFNHQW
EPQIFSGLASSLKTAKLDYACSADPFDHVEALHTTAEQQSVLAALTDPLVREDARDVMVGRSFRKDCWIKGARLLPPEER
QTLIEQQRIALCSPRSAISMTVRGATREATMKEAVHEPLLEAFEQHGPLTIGELQSRLQAQDIATSQTIEALLVLAGSGH
VHPIQESTERTRRCCHAFNSHVLAQNGDILQYLASPVTGGGIALDHVSRLMLQAAQSGNELDAWVRHVWQRLDSSGRRLM
KDGTALPDAASNLAELRTLAANFHDQRLPLLQTLGLI
>AHV93400.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MRILHAEAATGLGGQERRILKEMAAMRERGHHVELICQPQAQMAAKAAELGFTVHRLPMGGMANLLRGLPQIRRILKQGH
FDVLNTHSRIDTLLAGIGARLARTPLVVRTRHLSNRVNSMLAYTWVPHRISTVSNHVRDYLIERGVPSARMETIYSPIKL
PPADLRSTLRAELGLSDQDIVICSVAVLRATKGHPELIEALQPVIKADPRVHLVIVGTGSPMFETLQSLINAHGLEGRVH
MMGFRDDVPNIMAGSDIFALPTRKEASGPVFVEAAACGLPVVGLDVGGVSEMLHDGETGMLVPPDDIEALRAVLQRFIAE
PELRRLMGQAGKQRVRGEDKFSLRRLAERTEHVYWRWLREVAPTRFASSRSQTQ
>AHV93401.1 polysaccharide biosynthesis/export family protein [Bordetella holmesii ATCC 51541]
MFRFLPLVILMGLSGCSILAGSGPTRGAIMDAGTAQGADAPGAYDVVDVNASTIEPYVLKRPPEVDGNTSDGYAGNMRAR
PGDVLRILVADSMEGGLFAPLNTGGTVFEAVRVDAEGMISLPYAGHLRVRNKTLGAIEQMVKNALRNTAAVQPQVMVDLA
DDRSNSVLVTGAVAQPGRFGGNKSPLTALDAVAQAGGSTLPPY
>AHV93402.1 hypothetical protein D560_1357 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSVHR
>AHV93403.1 hypothetical protein D560_2690 [Bordetella holmesii ATCC 51541]
MATRVKQFIIHGVTESGARFRPSDWAERLAGVMAQFRPPGSAGNHLTYSPYVLPVVIDGVRGIVVDQRLRELEPLAFKFV
VDFARDNGLKTEEREV
>AHV93404.1 AAA domain protein [Bordetella holmesii ATCC 51541]
MSTSRSRRRSMPVVVNLDGDNIHLSNLCGPLDENLRQLADGMGVTLARRGSRVTIEGEQAELTGRALRRFYEQATHRALS
VDDIQLGLVEIGVGRRVEAEEAPRDSDPGLPAVDDESDGIALRTRRTDLRPRTPRQREYLNNILKHDITFGVGPAGTGKT
WLAVACAIDAMERDTVQRLVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLMGFERVQRLFEKQTIEIAPLAYM
RGRTLNHAFVILDEAQNTTPEQMKMFLTRIGFGSKAVITGDPSQVDLPRGQQSGLAHAVDVLADVQGIATTRFTSRDVVR
HPLVARIVDAYDLAEQNGTA
>AHV93405.1 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Bordetella holmesii ATCC 51541]
MTQNATSETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPDLLAGDGELAIRVSYDKAARTIT
IADNGIGLSREEAIANLGTIARSGTREFFSQLTGDKQKDAQLIGQFGVGFYSSFIVADKVSVLSRRAGADDAILWESDGQ
GEFSIAPAQKASRGTDVVLHLRADEDEFLNGWKLREILRRYSDHISLPIQMKKEEWDADKGEQVVRDEWETVNQANALWT
RSKGEISDEQYREFYKTVSHDFEDPLAWTHNRVEGRSEYTQLLYVPRQAPFDLWDRDARRGVKLYVKRVFIMDDAEQLLP
AYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRILSLLEDLAENRKDDYAAFWNEFGQVLKEGVGEDPSNQER
IAKLLRFASTQSGDAAQTVSLDEYLGRMKEGQDKIYYVTADSFSAASNSPHLEIFRKKGIEVLLLWDRVDEWMLSHLREF
DGKSLVSVAKGGLDLAELADEEEKKKQTEVAESFKPLVERLQAALGEHVKEVRVTLRLVDSPACVVVGQNDLSPHLLRML
KAAGQEAPEVKPVLEINPEHALIARIRDVPEADFAAWAQLLLDQALLAEGAQIADPAAFVKRLNALLLKV
>AHV93406.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MNIPRRHLLRALGAAVCCSALPIAQPKASSPIRLLVGFAPGGAIDLVARALAEGMRAAGYSMIVENKAGAGGRIAVDALL
NAANDGNTLLFTPSTNLTLYPYLYKSIHYQPTDFTALGTACKFDFGFAVGADSPAKTLAEFLALARQDPKFAVYGTPGAG
TVMQFLGMMLASASKVPLTPIPYKGGSLALTDTMGGVLPALITTLPNLIPMHKAGKIRILATTGSAPSPALHDVPTFAAA
GYPTLTQSEYFMLLGRKDLPPAAGQALTKAMAGAVQSQGFEAIMRQQFFEPLVTAPERLQQQLQQESQFWSAVVKESGYV
PEA
>AHV93407.1 phosphonopyruvate hydrolase [Bordetella holmesii ATCC 51541]
MNRHQVLRQALQEGRLLSAMAAHNPMAALLAEQAGFDAIWGSGFELCASYAVPDASILSLSVHVEMMRAIVARVSVPVIA
DIDTGFGNAVNVAYVLPQFEAAGVSAVVMEDKHFPKDTSLREQGRQDLLPIETFQGKIEAAVAARQNPDVLIVARVEALI
AGLGQAEALTRATAYVQAGADAILIHSKQKTPDEILEFVRAWSGQAPLVLVPTAYPQLRESDIARLHKVGIVIYGNHAIR
AAVGAMREVFARIRAEGGIAEVDAHLPTVKEIIALQGDAGMRELEKRFLR
>AHV93408.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>AHV93409.1 putative transmembrane sensor domain protein [Bordetella holmesii ATCC 51541]
MSMAAGGLPVTGMYPLDDPEAALQALSERMPIAIKRLTPWFVSINVETTI
>AHV93410.1 relA/SpoT family protein [Bordetella holmesii ATCC 51541]
MSATETSPLPEPFDLAWHQAASAGLDAAGAQLLARAAAWALPRCGDQVAVTGESLTHHAAGAVRILAELHTDAATRAAAL
LATLPADLNVAAPALRNDPVAVEFGAEVARLVQGARALLRLGIVARQASDSAADTGSQKEMQRKMLLAMAADLRIVLMRL
ASRLQSLRWHAETKTPCSASFAQETLDLYTPLANRLGIWQLKWELEDLSFRFLDPVRYKEIAKLLEEKRVEREAFIADAI
ERMQAALARAGIRGEVSGRPKHIYSIWNKMRLKRLDFSQMYDLRALRIIVDDVRDCYAALALVHELWVPLQDEFDDYISR
PKPNGYRSLHTVVADQQGRAFEVQIRTHEMHQFAEYGMAAHWRYKEAGSRGGQVTASSDYDRQLAWMRQLLAWNTDVETS
KEAGEPAGKDVLRPALHEPDERIYVLTPQARVIELPRGATPVDFAYHLHTDLGHRCRGARVDGQMVPLQTRLSTGQTIEV
IAAKSGGPSRDWLNPQLGYLASPRARAKVRLWFNAIELQQRITQGQAMVEKELQRLGKTAVNQEQLAQNLGFAKADDLYV
AAAKEEFSLRQIDSVFQQPVAAAAPSPVLTHARSVDSAEKAGKSGVLVVGVGSLLTQLARCCRPAPPDRICGFVTRGRGV
SIHRADCHSFQALAEREPERVIDVEWGNTSDSFYPVDISVHAHDRPGLLRDLSEVFARLRLNVVGVNTQSKQSLAHMVFT
VEVRGGDSLQKALDALREVSGVSSAARR
>AHV93411.1 putative DNA repair family protein [Bordetella holmesii ATCC 51541]
MGLTDEVLPASPKPNPFLPLSVLRQAGAPRATPEREREWAENIYEALRACAPELVVSCAEHEGERELRPSPLIAEAPLRV
ADMGGDGLEHVWLQQSLIDESGPPLDSAGDSTGGIDVLDTQARNPLWAFVRHRLGARELAPYAQAAAQNVRGQFLHRALE
LAWRLLPDQEALHLAMSQARLAPLLHEAVEQAADETLVAYAPALRALECTRAESVLARWMALEARRLPFVVAGLEADHRW
RHGPLSLKLRLDRMDRLADGRAVILDYKTGSGQARPESDWARARPINLQLPFYAAVLAGDAPDTHVVGLLLGQIHARNVG
AQGLAEEDLGMEGVHLAADSEAFAGRNWAEILAGWRAAIENLANEYARGHAPNVAWGRDDLKYCDAMPFLRLDLDVDEA
>AHV93412.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MSIYGEPKNGDFARYVEELSRQGLGSETSVTGQSPGEVPRGHVPPPRLRRAKPASVPAALSPATATPAGQPTLAQQASLR
QASSRQALLGFIVICLAVWNFASYLAHEHQSAGRFIIPALVGLWLFRGAARKREQSRAATRVLPPLNLPPKP
>AHV93413.1 asnC family protein [Bordetella holmesii ATCC 51541]
MDQTDIKILSLLQQDATRSVAEIADQVNLSVTPCWRRIQKLKDDGVIARNAILLDPAALGLNLTVFVTIKTSQHNAKWTQ
ALIGAVMALPNVVEFHRMAGDIDYLLKVVVEDMAAYDRFYLRLIDAVDLLDVSASFSMEVIKSTTELPLPGI
>AHV93414.1 hypothetical protein D560_2934 [Bordetella holmesii ATCC 51541]
MADLFALTEEALAGMGIELVDVERAALGLLRVTIDREGGVRIEDCEQVSRQLSRVFEVENIDYKRLEVGSPGVDRPLRTE
AEFRRFADERVEIKLREAVDGRKVFTGILRPADPSADGKTVFGLEFEAKKDDIQVLSFTLDDIERAKLDPVLDFKGKKR
>AHV93415.1 putative molybdopterin binding domain protein [Bordetella holmesii ATCC 51541]
MAADIASRRIGLIIVGDEILSGRRQDKHFAKVIDMLGTRGMQLSWAEFLPDDRDRLVAAYRRSFACGDIVFSCGGIGATP
DDHTRQAAAQALGTDLVLHPSAEEAIVQRTQELAAKGQGTVDMRTPENQQRLQMGMFPQGCEIIPNPYNRIPGFYIREHS
FVPGFPIMAWPMLEWTLDTRYRDLQHTVRHSEHSFLVFNMPESRITLSLQTLEQRWPGVRAFSLPSVGEAGAPGHIELGV
KGEPEPAAQALEFLRAEVQRLGGQFTAPVKS
>AHV93416.1 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Bordetella holmesii ATCC 51541]
MKIETALLSVSDKTGIVEFARALAARGVRLLSTGGTARLLAESGLTVTEVAQHTGSPEILDGRVKTLHPKIHGGLLARRD
SQEHMETIAASGIDRIDMLVVNLYPFRETVAKPDCTFADAVENIDIGGPAMLRAAAKNHGTEAGGVTVVIDPVDYSRVLT
EIDQNGSTSYALRLELATKVYAHTASYDGAIAAYLTSLADAAPAQDAVPARNEWPRTLTLQVQQQQALRYGENPHQTAAF
YVDPQRPSGLLGNYRQLQGKELSYNNIADADAAWECVRSFDTPACVIVKHANPCGVAVAGSNLEAYQKAFKTDPTSAFGG
IIAFNRPVDAATAEAVSGQFLEVLLAPAYDGAALAILAAKKNVRVLEVPAGTGQNAFDVKRVGGGWLVQTPDAFQVPRDA
LKVVSKRQPTEAELNDLAFAWKVAKYVKSNAIVFVGGGMTLGVGAGQMSRIDSARIASIKAENAGLTLQGSAVASDAFFP
FRDGLDVVVAAGATCVIQLGGSVRDDEVIAAADEHGIAMVLTGTRHFRH
>AHV93417.1 'Cold-shock' DNA-binding domain protein [Bordetella holmesii ATCC 51541]
MSDMTATAVQGDNPKSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNGFKTLKEGQKVAFETIQGPKGKQALNITS
A
>AHV93418.1 pyridine nucleotide-disulfide oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MKRFIFIGGGVAAVTAVKELRDAGFDGEIVIVTDEPDLPYERPPLSKDWLTGQFDRGQFRINPQQWYADNQVDVLLSTRA
VRIDTEKREVELSDARSLTYDALILATGVRAKTLPGFAGDRVHVMRSLSDAERLRERLVPGHHLAVLGAGFLGCEVAAFA
VAKGLRVTVFDPGALPLGRAVCQEIGRAMIDIHREHGVQMRTGEIVAAINETPTHVELTTGRGEVVICDDVLVAIGSVPN
IELAEQAGIEVDGGILTDEYGRTSAPDVYAIGDVAARFHPVYGRMFRVEHHDTAMRHGVNVARNLLGQPVPFTEEHFFWS
QQYEHSLQAYGQAVGDCVEVIRGSAKEKSLSVFSLDGKRIKAITCLNRPQDLMQARKIMAIPHEVTKEQLADPAFELKSL
LPKPARPQRREVNA
>AHV93419.1 drug resistance transporter, Bcr/CflA subfamily protein [Bordetella holmesii ATCC 51541]
MLAVFTFSGTLAMHIFVPALAMAGKDLGASNASMQMTVSLYILGLAGGQLVYGPLSDRFGCRPVLMGGLFIYTLAGLAAA
LAPDAHALIAARLFQALGGCAGLVLARAIVRDTAADSSAAKRLALMNMMVMISPALAPLLGSFLAATLGWRSILVVLCLL
GVANLLLAWRKLPETLPQTAALTPSRLLRDYRALFRSPRFVGYTLGGGCATTSMYAFVASAPFIFIDQLHRPEHEVGVYL
AILVSGVWLGNAICGRLLNTVPIDRLLMGGNLLSAISVLPLLVCVLGGVMNTTLTMGLMFVFCVGAGACSPAALTLAMSV
NPQVIGSASGLYGCTQMAIGAICTSLAGLGSSPLRAAVLVIAVACVLSQFALRMAQSSRDPAPAAS
>AHV93420.1 hypothetical protein D560_0756 [Bordetella holmesii ATCC 51541]
MQQEIDRGLGRPMARNAGAQERKLDANGIGWYSDVRVVALERRADLICALFGRGPEWVVAGCAPVSAAYRLADSLMTNRS
LRVYLDHTRRYPPVHRQETFRITHIQP
>AHV93421.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MIKTRTLVQALAVAMGVAAAAGAQAANYPDKPIRVIVPFAPGGSTDIIARIVTQRMSQELGQPMVVENKGGAGGAIGAAE
AARAAPDGYTLSIATVSTMAVNPACRPNDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELRKNPGKYSYGS
SGTCGVLHLMGESFKMGTGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMAQIQAGKLRAMAIAWPKRIDAIKDVPT
FAEAGFPALNQPVWYGLLAPKGTPPEIVTKLRDAAVVALKDPKVLKTLDDQGSAPSGNTPEEFAKEIKEQYDWAADVVKK
QNIKLD
>AHV93422.1 hypothetical protein D560_2844 [Bordetella holmesii ATCC 51541]
MEWKIVRSGWVGDRNFDVEMSEETAGFVPRVKVYGFPTLDVADAPYPTEALALKGALRRLSQEFDEEPRFE
>AHV93423.1 hypothetical protein D560_0195 [Bordetella holmesii ATCC 51541]
MKKWFVAAGIGAAGLMLSSAALARVDIGVSIGIPGVVYPAPVYVAPAPVYAPPPVVHYPAPVYVRPQVVYPAPVYYGGPR
YYKGHRHYDRGHRGHRGHRGHWRD
>AHV93424.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93425.1 amidohydrolase, AtzE family protein [Bordetella holmesii ATCC 51541]
MSSALNIAKQIAAGQRRAVDVLDDTLARVRADSSNAFTEVTLERAYREAAEIDARRARGEALPALAGVPYAVKNLYDIAG
VVTLAGGKVNAGNAPAHRDAALITRLRDAGAVLVGALNMDEHAYGFTTENTHFGPCRNPHDPGRIAGGSSGGSAAAVAAG
LVPLTLGSDTNGSIRVPASLCGVFGLKPTYGRLPRSGSFPFVYSLDHLGPFAGTASDLALAYDSLQGAWAEDPACAQCQP
ELSLPALEGRPLRVAILGGYFDEWAGPQARRSVAQAAAALGARDVVEFEGTDQARAAAFIITGAEGGALHRQRLTTHYDD
YEPYSRDRLAAGSLIPATWTTQAQRIRRRFRDAVLPWFEHYDVLIAAATPVPATPIGTDTLSIAGQQLPARASMGLLTQP
ISCIGLPVATAPLWQGQGDTAHLPLGVQLIAAPWREDLCLAAARLLERAGVAYTRKVAA
>AHV93426.1 shikimate kinase family protein [Bordetella holmesii ATCC 51541]
MNLSADLCAGPDEEPPDPSAAPEAAAGECIEPLAQLPHDLPIFLVGMMGAGKTTIGRGLARALGREFIDLDHELEARCGV
RVPVIFEIEGEAGFRKRESSALQECTQRRAIILATGGGAVLAEDNRRLLRQRGIVMYLRASVDELYRRTCRDRNRPLLAT
ADPRGTLRDLMIRREPLYTEVADLVIETGSTPIASLVKAILPKLQAYEKKL
>AHV93427.1 bacterial regulatory s, lacI family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAHGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGARLGLRLRGHR
>AHV93428.1 30S ribosomal protein S13 [Bordetella holmesii ATCC 51541]
MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAAGVPVTKKVKDLTDAELERIREHLGVFTVEGDLRREVQLSIKRL
IDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASLKK
>AHV93429.1 molybdenum cofactor biosynthesis protein C [Bordetella holmesii ATCC 51541]
MVDVGDKTESDRVAIAQGAVRMSPQAYGLLTQPGQGKGEVLNTARVAAVLAAKRCAELIPLCHSLPLSFVGIEFSLDDQA
HRIDIRATCRTRYKTGVEMEAMTACSVAALTIYDMCKAADKGIVIEQVRLAYKAGGKSGEWRND
>AHV93430.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MKPLPSLLKNRLRPLALAVALSLTHAVSHAQSETPQAVELQAQALDSALLALGRQYQLQISFPAALTQDKRGAPLAGRYT
ATQALDRLLAGSGLNWRFTGPSAVLVEAGAPTAQTLENVVVVAGYAPTSISELPRTVWYLTREQIEQQAQGGATLPEVLG
NLVPSLDLGSQSRTNYSQNMRGRSAQIMIDGVSLNSMRNISRQFDSISPFNIERIEVLSGASSVYGGGATGGIINIVTKR
GAPGPATFTSEVAGRSGFSGSEDVDWRVAQSVEGGTDQVFGRLALAYAQNGAAYDASGKQVTPDITQTDLQYNRALDLSG
TLDIKLDDKQSLKLLGQFYHSEFHPGKALYLGKNLQGALPLAGPANPDLLGIRNGFESDVKPSTERAMLMADYM
>AHV93431.1 hypothetical protein D560_2611 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSMWKKCVRL
>AHV93432.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93433.1 nlpB/DapX lipofamily protein [Bordetella holmesii ATCC 51541]
MNTRHAGISALMALMLLSGCNDINQLMGNDESIDYKSTRRGEPLSIPPDLTQANADPRYKAPASGSTTFSQYQAQGQQVV
SAPQSSNVLPQRDDMKVERDGNLRWLVVQRSPEQIFPKVVDFWTDTGFTVATNDPRSGLIETEWAENRAKIPESWLRQLL
GAVLETAWDSGEREKFRTRVERVNGHTEIFISHSQMLEKRTGPDGGQVQWTNGKEDPGLNAAMLARLMVYLGTDVDAARK
LVAQAEAAPQRPAVEQSVRAEGAMLVVAESFDRAWRRVGVALDSGGFAVDDRDRSAGDYFVRYVDSDTGLKNDEPGFFSR
LFGGDKKAAAAQYRIHVAGSGDQTQVTVLDSNGQRDNSATAQRLLSVLKDKM
>AHV93434.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV93435.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MLQTALGGTGGAVDNALPLNTAAALGGVGKALDPTLQPVVATVENLTQTLGSTTGLGEPVAATLNSVGGTVSNLGDTLSG
SGLPGGLSSGLGGLVSGLGETVASADGLLVADANNPNPLTKVAKNATGAVGALTAGLTGDGGLLQPVTQAVAGLTGGLLG
QSQGALLEPALNNTGKATDNVLPLGLQTALSAVGEGLDPTVAPVGATVTNLTQTVGATTTLGAPVSSLLSSVGGTIAGAS
GSLGGGLPVGGLDGVLQGVGNAVAHAGGLVKADASNANPLGTVLKDATGAVASLTGGLGLNAGTGGLLSPITGGLLGGVT
GGAANGGLLSPVTGLLSGVTGGTTGGTGSNSGLLGGLLGGLTASASGSGTANNGGLLGGVLGGVTGAANTANGGALGGVL
GGGAAGGLVGGVVSTVTTTVATVTGGVASATSSAGNAGNGGLLGGLLGGLNTGSTTTGTSATTNGGLLGGLLGGLLGGLG
SKK
>AHV93436.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MSAPATIPVFAHAIVSRDERGVYTLCIHDAKSLNILASAVTLSLTEAARWVAAQPDARGAILRGSGERALVGGANIYEMA
DLDPQGAREFITRLRDLCDAVADIPVPTIARIAGFCLGAGMELAAACDIRLASEDAVFGMPEVRVGIPSVIHADWLLLTG
ETIDAGQALQWGYVEFVSERDELDALVEKTVAPIAASGPRAVRSQKALLRYWSTSTVQAGLDRSVAAFGEAFTTDEPRRY
MAPFVARRQHKESR
>AHV93437.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MFAKSCLAATMAAAFTLAAGAAGAQVPEGYPADYQKIIDGAKKEGKVVIYSTTDTKAAAPIIAGFEAAFPGVKVEYNDMN
STELYNRYISEQASGSGSGDVVWSSSMDSALKLAVDYALKYRSAEAGKLPDWAVWKDSAYGTTYEPAVFIYNKRLIPQGE
VPSTHAELAKLIASQPEKFKNKVTTYDIEKSAVGFMLGVQDKANDPHYFDTLRDTAKGGWLYSLRPAP
>AHV93438.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MFIKLCAAAPLASALVALPAVAASYPQSTIKLVMGYAAGGTADLSWRIVAPLLAERLKQAIVIDNRPGAGGIVASQAALN
APADGYTLLMAASGNFGISPVLMKSLPFDTVKDFDMIAQAASFGYAFAVSGKSAFHKIQDVIDFAKQNPGKLSIGTVQVG
SAQFFAAELFKSMAGISAVTVPYRSSGDVVAAARSGDVQLIIDTLAPVVPHMADGALRVLGVSTAQPFPALPQIPTIASS
GLDGYVVEAWNGLAARAGTPPEVVERINRELADILTMESVKKRFLDLGIVAQYGDAKTVRALQLADIKKWGDVMVSAKIE
KL
>AHV93439.1 formate dehydrogenase, gamma subunit [Bordetella holmesii ATCC 51541]
MAEPRHPKLIQRYTAGERTNHWLIALTFILLALSGLALFHPAFSWLYALLGGGPWTRILHPFIGVVMFVCFFVFACHMWR
NNLMTKNDVQWLRQLGDVVNNREDRLPEVGKYNGGQKLLFYVLILCMLGLILTGIVMWRAYFSMYFPIWAVRAASLLHAA
FAFVLICAIIVHIYAAIWVKGSIQAMVRGTVSWGWAWKHHRAWFRTVRKESPGGE
>AHV93440.1 helicase conserved C-terminal domain protein [Bordetella holmesii ATCC 51541]
MLKSIAETGYTSPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTVPILHRLMPLANSSASPARHPVRALILTPTRELAD
QVYESVKRYSLHTPLRSAVVFGGVDIGPQKEALRRGCEILVATPGRLLDHVEQKNVNLSQVGILVLDEADRMLDMGFLPD
LERIIRLLPPQRQGLLFSATFSNEIRKLGRSYLNQPIELEVAARNATADTVTQIAYPMTGDAKRAAVVHLVKSRGLKQVI
VFSNTKIGTARLARDLERDGVKAESIHGDKSQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDY
VHRIGRTGRAGASGEAIALFTPEEERYLLDIEKLIKRQVPRGKLELPAELLAHGRGRERSGSRESREGRDGSRENREGRD
SWRDTNRRAPRQPVDDFFYKPYVPAASSTAAEPDAPRTPSTGKRQLGCCWVAAASRIDHAACGPARIVPGRVEQCRFFEP
WHV
>AHV93441.1 prolyl oligopeptidase family protein [Bordetella holmesii ATCC 51541]
MNAPDTPQDPFLFLESLDSRKAEQWVSTQNARTLEHLDQDPSIAALTERLVDIYDSPDRIVTCSRHGDWAYNTWTDAEHP
LGLVRRAPWQDWLAGTAVWETVLDVDALAINSTHSDGTRWTLADFDLRYPDGERALVALAPDGSDACIIREFDVATRSFV
PDGFQLLQPGQNSMDWIDRDTVYVGWDDSADNDKAQLTDAGHPRFVRRWRRGTPLDQAPIALECASTDISVHAWYDYELK
RHLAVRYLSMWSTDWLWLDEAAGQWRRYDVPADAEISEWHEWMFIHLRSEWKTAGGNYASGSLLAIERERFLAADMRADV
LFHAGPRPVLADLDFTLNYLILTERHDCVTHLRRLKPGATGWQSEPIVTPADSAVTMTAIDSLRDDSVLVHVDHFLQPTA
LYHAQASDVSPNDWHLLARLPPQFDTTGMRAELRYADAADGTQIPYWLIGRLSAQPQPCLLYGYGGFEEALDEPAYLATA
GASWLEAGGLYAIACIRGGGEFGPAWHQAALREKRQVAFDDFIAVAQALTDTGATTAQQLAISGASNGGLLVAACMVQRP
ELFAAVLCAVPVLDMLRFHRLLQGATWIDEYGDPDDAKARGWLLAYSPYHQVKAGVKYPAVLFTTSTSDDRVHPAHARKM
AARMQAQGHDRVWYLERRDGGHGAGVEARSIAHAEALETCFLWRSVTQ
>AHV93442.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MSKTYDIRPDQSVELLKALHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLAEVKSRRGRVTLADHGAGKSYLGFILYDLY
FKQLADDSHIYGIETREALVQSSQDLAQRAGFAGMSFLNLSVAESIVSPLLPETIDVVTALHACNTATDDAIRFALTKRA
DHIVLVPCCQAEIAAALRQNKGASLGDAAELWRHPLHTREFGSQLTNVLRCLQLEAHGYQVSVTELVGWEHSMKNELIIA
QHKPDRPRRKAAQRLHEILDRVGLPQLRERFTVPADL
>AHV93443.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MAARHSSFTRAAQELCVTQGAVSKQVKHLEEFVGVELFLRIRQGLVLTEAGRSYLTQVQAGLSQIEAATVELIAHQGRGG
TVRLTSMPTFGARWLIPRLTAFRRLRPDIHVEFLPHRQGYDFSTPELDAAVRFGEGVWPGSGADYIVGREIVPVCSPRLI
PQACREAEELLRYPLLHHTSALEGWRDWFEQAGCDARRALEGARFDQYSLLSQAAAAGFGIALIPRCLIEDELRDGKLVV
PLQLPIRARQGYYLCYPEQKASSPTLQAFRSWLMEVSRAAEPTPDNGLPIK
>AHV93444.1 chaC-like family protein [Bordetella holmesii ATCC 51541]
MAYRIAAADVADTFEMLWAREMPRGAYVPRWLSCETDAHAVRGLVFLLNRRCGDYARGISEDLLLDSVRRAVGQSGRCLD
YVVQTEQALRESGIDDGRLGALVRRLVQAAG
>AHV93445.1 hypothetical protein D560_3253 [Bordetella holmesii ATCC 51541]
MAEIATGAGLGQNLLAAVFASALRSMGFQILAARLAGATQTGLLIGLRARPCCAARYRPSPQSAGSGFA
>AHV93446.1 superoxide dismutase [Bordetella holmesii ATCC 51541]
MAHTLPPLPYAMDALAPRISKETLEYHYGKHHQTYVTNLNNLIAGTEFENASLEDIVKKSSGGIFNNAAQVWNHTFYWNS
LSPNGGGEPCSTLTEAINAKWGSLDAFKEAFNKSAAGNFGSGWTWLVKKADGSLDIVNTSNAATPLTTTDKPLLTCDVWE
HAYYIDYRNARPKYLENFWALVNWEFAAKNFA
>AHV93447.1 pepSY-associated TM helix family protein [Bordetella holmesii ATCC 51541]
MVLQHTERARALYYSDVSDTEAGPGERNFKRVQIDPATGQEISVRATRGGDFFYRFHFELEMGFPWGRWLASIAGMFMLV
AIISGVITHKKIFADFFTFRPRKGGQRAWMDGHNALSVLGLPFHLMITFSGLVLFMAMLMPAGIVAAYDNERDYFNELFP
AFAQTPAKNVAAPLTPLAPLVQQAESLWEGGRAGRVVVNHPGDAGATVTVTRSTADRVSYGRLAPSVTFDAVTGQVLNNR
DAEGAVATTAGTIVGLHLGLFAQPLLRWFYFLVSLAGTAMVGTSLVLCVGRQTPSKAAGRQG
>AHV93448.1 yihY family inner membrane domain protein [Bordetella holmesii ATCC 51541]
MYPTADPAEGDSSPQPRRRSWLRRVGHALRFAAHRADEERLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQDFRVAL
EDFLANNLMPPAVSDNIMEYLNQFARQATRLTTIGGAFLIVTSLLLIMTIDKTFNDIWHVGRQRPWPQRALVYWAVITLG
PLATGASLWATSFVARESLGLIHDVPEIISLAISFIPLVLTGLGFAALFVVVPNCRVYWRDALTGGFCTAIALEVMKSGF
AFYLTRFPAYTIIYGTFATLPIFLLWIYLSWLAVLFGASIAASAPMIRLGRWEINRAAGAQFVDAVGVLRQLLAARGQLP
PGCSSQTLSRQLNLHHDELNSVLESLRRIGMVAPTTDDHWILAADPQSTTLAPLYDQFLLDRQQRRVRRDPSLSELASRL
ADATSPPTLEELASLSHNSDIDPTPDDDTDLKTLPITVLPLENVQKPR
>AHV93449.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MVERRPWLDALAHVILLMGVALVAFPIYVTFVASTQTAQEVASAPMSLIPGKHFVDNYMQALFAGSGGGSSGTPVARMMY
VSLIMALAISLGKIAISLLSAFAVVYFRFPGRMFFFWMIFVTLMLPVEVRIAPTYKVVADLGLLNSYAGLTLPLIASATA
TFLFRQFFLTVPDELIEAARIDGAGPVRFFFDVLLPLARTSIAALFVIQFIYGWNQYLWPLLITTQEDMYPVVIGIKRMI
SGGDSVTEWNITMATALLAMIPPALVVILMQKWFVKGLVDTEK
>AHV93450.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Bordetella holmesii ATCC 51541]
MSHSHTEFGDIAGLRTALAERRVSAVELAQEGLARAAAADLNAFLHIDTELTLAQAKAADAALAAGTAGPLAGIPIAHKD
AFVTRGWRSTAGSKMLDGYVSPFDATVVERLQAAGAVSLGKLNCDEFAMGSGNENSAYGPARNPWDHQAVPGGSSGGSAV
AVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGIIAFGSSLDQAGPLAASSRDLLELLDVMSGYDERDATS
LEHCDGVKNAPGRVRAAYDSTQQSYQAAGSLPLKGLRIGVPAEFFGAGLAPEVAAAIEAALQRFEALGAERVAISLPRTE
LSIPAYYVIAPAEASSNLARFDGVRYGHRAAQYSDLNDMISRSRAEGFGDEVKRRILIGTYVLSHGYYDAYYLQAQRLRR
LIAQDFQRAFATQCDVIMGPVAPGVAKNIGENRDDPTADWLADIYTLGVSLAGLPAMSVPCGFGSTGRPVGLQIIGNYFD
EGRLLAIADRYQQVTDWHQRTPATQDA
>AHV93451.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWGPTKQA
>AHV93452.1 rieske domain protein [Bordetella holmesii ATCC 51541]
MSEASTKLQWHEVSHIDDIWEGEMTGVEVNGKKVLLINTDGDIHAYHDRCPHQQWPLHDGDLSDGVLTCAQHLWQFDVTT
AKGINPSTCQLHKYPCQVDDSGNIQVSVE
>AHV93453.1 hpcH/HpaI aldolase/citrate lyase family protein [Bordetella holmesii ATCC 51541]
MTDRSFLFVPGDRPERFDKTVHSGAHQVIIDLEDAVTPQRKDAAREAVGMWLRDTAARVCLRINPADTPWHEADRALLAW
PAVSRVMLPKAQARSDLESLARLLSGQTAHPPAGRIRSWMVQPGRAGGCPARRAAGLWLF
>AHV93454.1 type VII secretion system (T7SS), usher family protein [Bordetella holmesii ATCC 51541]
MSDEAATTPVAAAPVAAQAPSATRQAARYGIGVLAPAMPQTVQLPGPVEGYALSPEPDPCADWAGPPAPADLAPTPGQQA
PSDCQRAFPQYEVPQVSPSYALDLERRELAGSRPVLSQGVILPQPRWFSAINARPALSYGDRNWLYRSSGGPAVGVGNLT
ANSPAWGATAALGELQISDQFDSSSNIGEAKFGYSSSVGRLNLMDPSATAGAVDYGASAGSGTVRYGVSNSLTLEGQLQT
THGLTTRGMGTRYNAGDIGTFEAGVTQSSFDSVNAWRYRFGYNVTMADTVKVGLTGEDIGAGFSDLSSYTSGAASTRLMR
SKLSAGVPLRGMGTLSGTYTSDVFGRGDPNDRRVGLEHSMELARNVQFALGADRDLLSGDYEWKARLSMPVETFMRGHWL
GF
>AHV93455.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELRHLRHFVVAAEQESIASAARILCMVQPALTRSIQTLEESVGAQLFVRHARGVKLTAAGRQCYQDATRLLQEAAQMRS
NAVRASEGVLGNLHLAISPQHAWLPLICRMLGQFRDEHSLVTLMLDMLQSGRQLDGIHRGDLDAGFMFMRPRHDSSFAGL
LVHNEHLVLAVPENSPYAKSPPKRLSELSGEPYIGTPKASSFHFNDFVENEYRRLNFQPRTVQMGSNFLVMLGLVAAGMG
IAVVPGVSRFMHPRGIVFHNVPDLDSQLELELVWRSNDNSPVLARFLDVARRACAEGGVGERDWAPHREGAMTSI
>AHV93456.1 prkA serine kinase C-terminal domain protein [Bordetella holmesii ATCC 51541]
MRLNPSVLRQVAIAKTEPGDENNQDISSLVGKVDIRKLDRYSQDDPDAYSYSGGLCLANQGLLEFVEMFKAPIKMLHPLL
TATQEGNFKGTEGFSAIPFNGAILAHSNESEWQTFRNNKHNEAFLDRIYIVKVPYCLQVTEEIHIYEKLLRNSSLSRAPC
APGTLDMMAQFSVLTRLKEPENSSIYSKMRVYDGESLKDVDPKAKALQEYKDYAGTDEGMNGVSTRFAYKILSSVFNHDQ
TEVAANPVHLMYVLEQRIGREDFPEDVRRRYLDFIKGYLAPRYAEFIGKEIQTAYLESYSEYGQNIFDRYVTFADCWIQD
EEFRDPETGESFDRSALNDELEKIEKPAGIANPKDFRNEIVNFVLRARANNGGRNPNWTSYEKLREVIEKKMFSNTEDLL
PVISFNAKASAEDRSKHQSFVDRMVDKGYTEKQVRLLCEWYLRVRKSS
>AHV93457.1 putative exported protein [Bordetella holmesii ATCC 51541]
MKRTPVGRRAALLALGGLLSMSVHAQDKNFPAHALTLVVPFAAGGPTDVVARSLGASMSKTLGQPIVVENRTGAGGTLGP
SFVSRAQPDGYTLLIHHNGMATAPALYKKLPYDPLKDFEYVGQVADVPMTLMGRKSLPPADMPAFIAYARANGNKINLAN
AGPGAVSQLCGTLLQDALGTQFTEIPYAGTAPAMSALLGGQVDMLCDQTTQTLPQIKGGSVKLYGVTTQERIKSLPDAPT
LEESGLKGFEVMVWHGIYAPKGTPKAQIDRINEALRIALKDPAFATKMNELGAEIVPAAKQTPEGLHSWLQSETTKWGGM
MKKAGIEPQ
>AHV93458.1 TPR repeat family protein [Bordetella holmesii ATCC 51541]
MQGLTERLEAMLAKGQDNMLLRFSLGKAYVEAQRYALAIAHLRTALAFDPNYSIAWKWLGRALLESGDAAGARQAWESGT
QAARSHGDQQLIKELTVFLRRLEKQGL
>AHV93459.1 glycine dehydrogenase [Bordetella holmesii ATCC 51541]
MSRALDTHSDFIPRHIGPSDADQAKMLAVVGCSSLDALIEEVVPPRIRNQAPLALPSSRSEPDVLAELKQVAARNKVFRN
YIGQGYYGTHTPNVVLRNVLENPAWYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARR
GAKSKSQVFFISQHCHPQTIEVVRTRAEGLGIDILIGDEADGLPECFGVLLQYPHSLGGVVNYASLAEAAHAQGTVVACA
TDLLALALLTPPGEWGADIAIGTAQRFGVPFGFGGPHAGFMACRDAFKRNMAGRLVGVSKDAQGNPALRLALQTREQHIR
REKATSNICTAQVLLAVMAGLYAVWHGPAGIRRIATRVHSFTGVLRAQLQALGLTVENESYFDTLLIDAGAAATAIVAAA
EDAQINLRRVDEARVAVSLDETVTPEDVQALVNVFAAALGKPAGQIDVQALTAQAGAGLPPGTVRTTPILSHPIFSSVQS
ETDMLRYLRKLADKDLALDRSMIPLGSCTMKLNATAEMIPITWPEFALIHPFAPAAQTVGYLELIDRLSAALCEITGYDN
ISLQPNSGAQGEYAGLLAIRGYHQARGEHQRNVCLIPSSAHGTNPASAQLAGMDVVVVASDAQGNVDLGDLRAKIEQVGD
RLAALMITYPSTHGVFEEAVTEICELVHAAGGQVYLDGANMNAMVGVAKPGKFGSDVSHLNLHKTFCIPHGGGGPGVGPV
AVRAHLAPYLPGVLNEQGKLDAQAKVGPVSAAPYGSAGILAIPYVYIALMGAESLRRATEVAILNANYVATRLREHYPVL
YAGRHGRVAHECILDVRPLKDSSGVSAEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEGLAELERFIDAMVAIRTEIA
QIERGERDREDNVLKNAPHTAQMLLADEWHHDYPRQQAAYPVATLREAKYWPPVARVDNAYGDRNLVCACLPIEAYL
>AHV93460.1 bacterial Cytochrome Ubiquinol Oxidase family protein [Bordetella holmesii ATCC 51541]
MIDLDVVNLSRFQFAATALYHFIFVPLTLGLSFLIAIMESVYVMTGRQIWKRMTMFWGTLFGINFALGVATGVVMEFQFG
MNWSYYSHYVGDIFGAPLALEGLMAFFLEATFVGLFFFGWNRMSKVSHLIVTWLVALGTNLSALWILIANGWMQNPVGAV
FNPDTMRMEMTDFAAVLFNPVGQAKFVHTVSAGYVCGAMFVMAISAWYLLRGRHIDLAKRSMAVAASFGLASALSVVVLG
DESGYLTTEHQKMKIAAIEAMWHTEPAPASFNLIAWPNQAERKNDFAISVPYVMGLIGTRSLTTPLLGIDDLVRRAESRI
REGMVANAALERIRANPKDTEARLTFDRTWQDLGYALLVKRYQPDLSKVTDADIHAAALDTIPSVTPLFWTFRIMVALGF
YFILFFAVSFWLSTRGRLDTYPRLLKIAFWSLPLPWLAIECGWFVAEYGRQPWVIEGVLPTYYAASGLTLVDLAVSLTVF
IVLYTVLLIIGIKVMTHAIKAGPKRDKPLIPTSRAGNPVSAAIDA
>AHV93461.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQARGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93462.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCSGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93463.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLKLNNISARYGRIEALKGCSLEIGKGEFVTLIGANGAGKSTMLKAILGLNRPSQGSIDFDGRAITGASTESIIRSGISI
VPEGRRIFPEFTVAENLAIGEQIRNATKGEIEADLERIVEQFPRLKERWSQRAGTMSGGEQQMVAIGRALMSRPRLLLLD
EPSLGLAPLVVAELMEKLKEIHRAGTTIFLVEQNVTLALQTAQRGYLMETGRIVGADSSEALLASDTVRKAYLGIDD
>AHV93464.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYN
>AHV93465.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MPDPAHFSPAHSRRLRFFAHVLHLLGALFTQHALAQEARTGNDIAQLPAISVTGREISDLTEGTNAYTTEAMSTATGLTL
SPRETPQSVSVVTRQQIEDQGLTDTGAILATAPGISVTRSDSNRYSFSARGFTIDNFQFDGLVSPILSQWNYGSTDMDAA
IYDHVEIVRGATGLMTGSGNPSAAVNFVRKRPLREFAATFNASVGSWDYVRGDADISVPITEDGRIRSRLVAAYSQGDSY
VHFLDTRRRTFYGVVSADLTPDTVLTTSVEYQHNHSNGFGSGFPLFYSDGSRTDFNRSVANNAPWARQDTEATTYFVDLT
HRFTNDWKLRAAYSHTDGRYLMKHVYRGGYPDRHTGIIAAPPAFSNYDGNLDRDDIHFSLSAPFEAFGLRHEVALGWMSI
DNHSDIQRYAMVGPAPAIGSFFDWRRAHIQEPSWADTLSPADDVRTKQTGAYLVGRFALAEPLHLIVGDRWSDWKTKQMY
FGSRREYRIKNQFTPYAGLTYDINDTYTAYASYTEIFQPQNARDTSGGILPPIKGKSYELGLKAAYLEGRLNTSAALFQT
RQDNLAQVIPGSSIPGFPNMQASRAASGAKVEGIDLEASGQILPDWNIGASYTHFTIKDASGNPINTNHPRSLFKLYTTY
RLPGALHRLTVGGGVDWQSRMYQAAASPRGNVEVEQDSYALVSLMARFDFNKKLSATLNVNNLFDKKYYDQIGFYSQGWW
GAPRNVMLNLRAQY
>AHV93466.1 hypothetical protein D560_1207 [Bordetella holmesii ATCC 51541]
MSPGRESERQGTCKQLQAKVHVVSVEFGIWTSHTKSSWGGGWSNCEKTSSCATRYRIVGRSACKVLWS
>AHV93467.1 HPr(Ser) kinase/phosphatase [Bordetella holmesii ATCC 51541]
MLTVQELVDDNADKIPFNWIAGHGAADRAIPDDGMAAADLVGHLNLIHPSRIQVFGQEELAYYTRFDLRRRMHHMDELLI
GGVPAILLADGLSAPQDLIDQCDQHQVPLLSTPVAAAQLIDLLRIYLGKKLAPTTTVHGVFLDVLGLGVLITGESGLGKS
ELALELISRGHGLVADDAVEFSRTAPNMIEGHCPQLLQNLLEVRGLGLLDIRSIFGETSVRRKMRLKLIVHLVRATAQDK
FERLPLQDITQDMLGLPVRKVMLQVAAGRNLAVLVEAAVRNTILKLRGIDTLGEFMERQAMAILQSSK
>AHV93468.1 hypothetical protein D560_3212 [Bordetella holmesii ATCC 51541]
MIGLDPEALTTPDFLAVASGQMPLPGGDTLAAVYSGHQFGVWAGQLGDGRAHLLGEVAGPNGSWELQLKGAGLTPYSRMG
DGRAVLRSSVREYLASEAMHGLGIPTTRALALVVSDDPVMRETRETAAIVTRMSPSFVRFGSFEHWSSHRDPAHLQLLLD
YVIDKFYPGCRDADGEHGAVLAFLGEVSRRTANLMADWQSVGFCHGVMNTDNMSILGLTLDYGPFGFMDGFQLDHVCNHS
DTQGRYAWNRQPSVALWNLYRLAGSLHMLVPDAEALRAVLGQYESIFTQAFHARMAAKMGVSGWQAADEMLLDDLLRLMH
DSRADFTLTFRALAQAVRGEPGQLLDFFIDRQATQAWWERQVARHAVDGRAAQVRAEAMDAVNPLYVLRNHLAEQAIRAA
VQGDASEIERLMGLLRDPFRARADAGGYAALPPDWASDLSVSCSS
>AHV93469.1 threonine--tRNA ligase [Bordetella holmesii ATCC 51541]
MVQITLPDGSQRQYPGPVTVAEVAQSIGTGLAKAALAGRVTFEGTEPKLVDTSYRIEGDARLAIVTAKEADGLDLIRHST
AHLLAYAVKSLYPDAQVTIGPVIDNGFYYDFAYKRPFTPEDLQAIEKKMIELARKDEVVTREVWSRDEAVAFFRGIGEAY
KVEIIASIPSNENISLYREGDFIDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSNNEMLQRIYGTAWASKEEQDAYLHML
EEAERRDHRKIGRDLDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRAVYRDNGYQEVKAPQILDLSLWKKTGHWDNYREN
MFTTESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDE
CADFTVLLQKVYRDFGFTEVLYKVASRPEKRIGSDEIWDKAETALMESLRRTGCEFEISPGEGAFYGPKVEYTLKDAIGR
HWQCGTIQVDFSMPVRLGAEYVDPSDQRRAPVMLHRAILGSLERFIGMLIENHAGAMPPWLAPVQAVVCCISEPSADYAA
KITQSLKKQGFRVQADLRGEKITRKIREHSLQKVPYILVVGDKEAQNGTVAVRGLGGLDLGAIPFDDFVARLNEDVASRR
NVVQPDAKAV
>AHV93470.1 phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MKNRREFLRSTAKAGVAMGVLPSIIRQALAIEPQRRTGTIEDIEHIVVFMQENRSFDHYFGTLAGVRGFGDRFPIPVPDR
HGRHNATVWNQINDEGTPRILRPFHLDTARMFELMRVKGTPHTWSNAQDAWDMGRMHRWPVFKQNHSMAYFAQGDLPFQF
ALAQAFTVCDAYHCSFTGGTNTNRLFAWTGSNDGLGRGNGPALGNTYNTLSGGDPARAYTWTSYPERLQRAGIRWRIYQD
MNDNYSLNPMAGFKTYRDAYHHLAGSEDALRQQALSTHDLASLEDDVRADRLPQVSWICATKTGSEHPSPSSPAQGADYT
ARVLKALTANPQVWSKTVLLLMFDENDGFFDHMPPPAPPSRHDGPHTCSGQALPPWILPASITRSSPV
>AHV93471.1 metal-binding domain of MaoC dehydratase family protein [Bordetella holmesii ATCC 51541]
MSEQALDQWIGSTERMADTLDPVHAARIAATLGVAAPAAGEPLPPLWQWAYFIRTADMAGLGRDGHPARGGFLPPADDRN
RMWAGGRVDFHHPLKVGVEAERVSTVAAIKEKNGRTGKLLFVTVRHEFMQQGEAAIVEEQDIVYRQPSPPKLEGTEQAEQ
SQWRETVEPSAVLLFRYSAVTFNGHRIHYDYPYVTEVEGYPGLVVHGPLIATAMLSAFCRAHPQARLKHFAYRGLRPLIS
PKPFEVAGLIDAPGIARVWAEQDGTLAHQAEVRFEA
>AHV93472.1 benzoate--CoA ligase [Bordetella holmesii ATCC 51541]
MHDCPAELNFASHLAALNAPRAAKTAYIDDRRELSYGELAERVARFGGALRRLGLRREEHVLMVMHDTVDWPVAFLGALH
AGVVPVAVNTLLTPDDYAYIAAHCRARALVVSESLLPQLQPTLDSGQHDIEHVIVSEPTQTAAGRLGFESLLADAPIVAA
ARTLADEIAFWLYSSGSTGKPKGVVHTHGNLWHTAELYAKPVLGIREEDVAFSAAKLFFAYGLGNGLTFPLSVGATTILM
AERPTPQAVFKRLTMHRPSVFYGVPTLYASMMASPDLPARDTVAMRICASAGEALPRDIGERFTRHFGCQILDGIGSTEM
LHIFLSNQLGQFRYGTTGKPVPGYEVQLRDDAGSPVARGPSATSTSKDPARRSCTGTIATRRGSASWATGSRAVTNIAAM
KRAITSTPVAATT
>AHV93473.1 nucleotide sugar dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MRIQDVKLAIVGLGYVGLPLAVEFGKKRSVVGFDINARRIDELRRGHDHTLEVDDKELAEAKHLSYTTDRAELGQANVFI
VTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGATEEDCVPVLERVSGLKFNEDFFAGYSPERINPGDK
AHRVSTIKKVTSGSTDEVAELVDQLYKEIIVAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQ
AAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKCMTKKRLHVQGARVLVMG
LTFKENCPDLRNTRVVDIVKELGEYSVDVDVYDPWVDADEARHEYGITPVAQPAEGSYDAIILAVSHQQFVDMGAEAIRR
LGKPEHVLYDLKYVLSAEESDLRL
>AHV93474.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSDSILEVRGLRTAFHTEAGAWPAVDGVDLTVKRGEIVGLVGESGFGKSVTGFSLLGLIDPPGEVVAGEIRFKGKDLRKL
SEEQMRQLRGNRIAMIFQDPLMTLNPVLKVGEQMLEAILTHENVPRHQALERCREALAMVGIPAPEKRLNAYPHEFSGGM
RQRVAIAIAMLNRPDLIICDEPTTALDVTIQGQILYRMQEICREHHTALIWITHDLGVVAELADKVAVMYAGRIVEAGPV
NDVLDSPRHPYTRGLLDSMPAQSMPGSRLHQINGMAPSLSARPSGCAFRPRCPNVIPRCTEQPPAPTQEGPRSFRCYVPI
AREAA
>AHV93475.1 ATP synthase F0, A subunit [Bordetella holmesii ATCC 51541]
MAAAGGASPQSEYIQHHLVHLNNLGEKQSVIAQFNVINYDSLFWSGLMGLVVVFFLWLAARRATSGVPGRFQGFVEMIVD
MVDDQAKGIVHNAQSRLFVAPLALTVFVWIILMNALDLLPVDLLPSLWRLTGLGAHHGDPLYYHRILPTADLNVPMGMSL
GVLLLMFYYGIKIKHPAGFVKELFTAPFHAHGLAAVVLAPFNLLLNLIEYAAKAVSLGMRLFGNMFAGELIFMLIALLGG
AWTGFNASSIGLGIGHVLAGSVWAIFHILIVLLQAFIFMMLTLVYIGQAHEGH
>AHV93476.1 helix-turn-helix domain of transposase ISL3 family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEVTCSP
>AHV93477.1 N-terminal domain of DJ-1_PfpI family protein [Bordetella holmesii ATCC 51541]
MPRIAFLVTSANAIDLKESSAHPTGYWAEEALKSYERFVAAGFDVVVLTPDGNKPVPDPYGLEHFFHYPDVDRDYFASVY
RTFHHDPDDIRITLHHTTEQELVASRRLAERLVATGSTPQQAHELLSKAAKIAWRQKRLLSEVMLQEGMSGGCQNQRYVQ
RSTS
>AHV93478.1 flavodoxin family protein [Bordetella holmesii ATCC 51541]
MLVIAWLLLSWRAWRRSRPTPVPLAQAEAWLVAHASQTGLAQELAERSAEALRAAGQVAVVVPLNQVDAPCLARCTRALL
VVSTYGEGDAPDGAARFAQQVMRPVMHGSLPQLRYALLALGDSSYARFCGFGRELDQWLAAQKAQRLFDRVEVDRADPAA
LRHWQRELAAICGAADPQVWQAPDYQTWRLTARQHLNPGSSAGPCYLVSLTCQTEVFWQAGDIAEVGPRTAPQTPLQNPR
EYSIASLPADGCLQLLVRQQRHADGTLGLGSGWLTQRCPIGGEVALRVRSNPGFHLPPGPMPLVLIGNGTGLAGLRAWLK
ARVAAGHGRNWLVYGERHPAYDALLEDELRAWKATGMLAQLDLVYSRQGQGYVQDRLRERADALRSWVDNGATIAICGSL
HGMAQGVDDALSDILGVPLLLALRADGRLRRDVY
>AHV93479.1 hypothetical protein D560_3293 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSRARSNHLNRRGKRNQSENNAWKVYAG
>AHV93480.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MQTPLSDVVLSIQNLTVHVHGSRHRVVNDLGLQVRAGQTVCVVGESGSGKSVTSLATMGLLPPGMLNVQSGSILVDGEDV
LRATPHRLRQMRATHMAMVFQEPMTALNPVHTVGRQVDEVLRLHRKKLSARQRREHVLEMFRSVHLPDVERVYDSYPHQL
SGGQRQRIVIAMALILEPRLLIADEPTTALDVTTQKQILALIKELQDKHGTAVLFITHDFGVVAEIADHIVVMNRGDLIE
SGTRDDILARPRQAYTRRLVSSVPSLVPPERPTPTDRRCCTCKSSVVPMSASVGCWARRGAASWRLPMSISRCVAERSSA
SSASPDRGNPPWRGASCA
>AHV93481.1 ABC 3 transport family protein [Bordetella holmesii ATCC 51541]
MTLIEQLYAPLAFDFMRQALLIAMLVAIPTALLSCFLVLKGWALMGDAVSHAVFPGVVLAYMAGIPLEIGALGAGMLCAV
GTGYLQANSRLKQETVMGVVFSGMFGLGVVLHTSIRSEVHLDHILFGDMLGVSWPDQVESGIIAIVVSGVIVVKWRDLLL
QAFDPVQARALGLRTGWLHYGLLALLSLSIVGGLKAVGIILIIALLIAPGAIALLLTRSFGAMLVCAVSIAVVSCMASVY
LSFFLDSAPAPTIVVTLSLLFVGALALRRKRHAS
>AHV93482.1 cytochrome c oxidase, subunit I [Bordetella holmesii ATCC 51541]
MSSVIVDHVSPGAGHDDHQHDDHHHAVPTGWRRWLFATNHKDIGTMYLIFSFVMLLEGGTLALLLRTELFEPGLQFFRPE
LFNQFTTMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLLPVAGLMLTVSFFVPGGATAAGWTLYAPL
SAQMGPGMDLAIFAMHIMGASSIMGAINIIVTILNMRAPGLTLMKMPLFCWTWLITAFLLISVLPVLAAAITMVLTDRHF
GTGFFNAAAGGDPVLYQHVFWFFGHPEVYIMILPAFGIVSAIVPALARKPLFGYASMVYATASIAVLSFIVWAHHMFTTG
MPVTGQLYFMYATMLISIPTGVKVFNWVATMWRGSMTFETPILFAVGFIFVFTMGGFTGLILSVAPIDIQVHDTYYVVAH
FHYVLVAGSLFALFAGTYYWLPKWTGHMYSEKLGKLHFWLSLISFNVTFFPMHFLGLAGMPRRYADYAAQFTTFHQIATI
GAFWFGLSQLIFLWAVIRCYRGKGEIAPAKPWDGAEGLEWTVPSPAPFHTFETPPQVK
>AHV93483.1 histidinol-phosphate transaminase [Bordetella holmesii ATCC 51541]
MGAIAPYQAGKPIEELAREFGLDPAGIVKLASNENPLGMPESARQAMLAAATALARYPDPNGFDLKAALAARYGVPANWI
TLGNGSNDILEIVALALLEPGVSAVYAQHSFAVYRLATQARGARHLVVPAKDYGHDLDAMFAAIDGDTRVVFIANPNNPT
GTFAPGAAIERFLGQVAQAHGERVTVVLDEAYNEYLDPEHRFDSVALVRRFPNLVVSRTFSKAYGLAGLRVGFAVAQPAL
TDLLNRVRQPFNVNTLAQAAAVAALADTAYLERAYEANRAGKAQLVKAFDVLKLRHVPSYGNFVLVHVGDAARINLELLK
RGVIVRPVGGDGLPEWLRVSIGLPAENERFIAALTEILAV
>AHV93484.1 3-oxoacid CoA-transferase, A subunit [Bordetella holmesii ATCC 51541]
MDKVYASATEALAGIVKDGQMIAVGGFGLCGIPEALIAALRDSGVKDLTCVSNNAGVDGFGLGQLLNTRQVRKMIASYVG
ENKEFERQYLSGELELEFTPQGTLAEKLRAGGAGIPAFFTRTGVGTIVADGKELREFDGQQYVMERSLAPDVSLVKAHIA
DRSGNLVFRKTARNFNPNVAMAGKITVVEVEQIVDTGSLDPDQIHLPGIYVHRIVLNATPEKRIEQRTTRPA
>AHV93485.1 ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Bordetella holmesii ATCC 51541]
MTPIFDWKFAWEILPSLGSALLVTVQATILGMLFAVVFGLVLALLRRSPWKAVSWTAGLVVEFVRSTPLLVQMYFLFYVL
PSLGLSMSPLITGVLALGLHYAAYCSEVYRAGLEGVPRGQHEAAIALNLSPWRTAVDIILPQAIPPVVPALGNYLIAMFK
DTPLLSAITVVELLQKSKIIGSSTFRYTESLTLVGIIFLVLSLIAAWGVRRLEGRLKVIYGGA
>AHV93486.1 fumarate hydratase, class II [Bordetella holmesii ATCC 51541]
MPVPLITAMAQLKRAAAQVNAELGELDPAIAKGIIAAADEVIAGKWPNEFPLSVWQTGSGTQSNMNMNEVLANRASEILG
GVRGEARKVHPNDHVNRGQSSNDTFPTAMHVAAAVQVEQHLLPSLKTLRATLAEKSAAFYDIVKIGRTHLQDATPLTLGQ
EISGWVAQLDLAEAQIRATLPGLHQLAIGGTAVGTGLNAHPEFSAKVSAALAHDTGVAFVSAPNKFQALASHEALLFAHG
ALKALAAGAMKIANDVRWLSSGPRSGLGEISIPENEPGSSIMPGKVNPTQCEALTMLSAQVLGNDVAINIGGASGNFELN
VYKPVIIHNFLQSVRLLTDGMASFDAHCARGIEPNLERIAELVDRSLMLVTALNPHIGYDKAAQIAKKAHKEGLSLKQAA
LALGHVSQEQFAEWVVPGNMTNAKT
>AHV93487.1 acetyl-CoA C-acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MSHTEAYIVAATRLPVGKRNGMYATTRPDDMLAAALQGALAQVPSLDPALIEDVIAGCAMPEAEQGMNVARMSLLLAGLP
QSVAGVTVNRFCASGLQAVADAAARIRNGEADVMIGAGTESMSAMPQIMGNKIALNPRIFAQAETLGMAYGMGLTGEKVA
ERWNVSRADQDAFALASHQKACAAIAAGHFRAEITPYTIIKHLPDGRSGVARATEQLVDTDEGPRPDTSLEALARLKPVF
AARGSVTAGNSSQMSDGAGAVILVSERMLKQFQLQPLARFLSFSVAGVSPEIMGIGPIAAVPKALARAGLTLDDIGWIEL
NEAFAAQSLAVIRDLGLDPARVNPLGGAIALGHPLGATGALRTATLLHGLRRTGTRYGMVTMCIGTGMGAAGIFEAL
>AHV93488.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93489.1 quaternary ammonium compound-resistance protein sugE [Bordetella holmesii ATCC 51541]
MTWIILVFAGLFEVVWAVGLKYTHGFTRLVPSLITVGGMLVSFWLLSTAMKSLPLGTAYAVWVGIGTIGAFVAGIVLFGE
ALNGLRVISVLLIVAGLIGLKLASG
>AHV93490.1 putative type IV pilin [Bordetella holmesii ATCC 51541]
MQPKRRQAGQAMTEYIIVVALVAVAAIAVYQYFGQVLRAQTAAMARELSGEDGTAQVKQAQGAAGKAATQAKARTLKSFT
GNAGSK
>AHV93491.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MIHIQNLSKTYATPHGRFEALRGIELLIEQGEVFGIIGPSGAGKSTLVQCINLLERPDQGSISIGGQELTGLSESRLRAQ
RRRIGMVFQGFNLLSRRTVYGNVALPLEIAGVPRQEIPAKVERLLALVGLQHLRDRYPSQISGGQKQRVGIARALANDPD
VLLSDEATSALDPETTHNILALLRDINRKTGVTVVMITHQMEVVREICDRVAVLSHGQVVEMGRTQDVFASPKHDVTRAM
VSAATASELSEGTLAAVRERIATHTSAQPGRAARLWRLSLTGKDAGGALVSDLARDHALDISLIQARVDDIQGVAVGTLF
VLALGAAQAIEGALAALAAHDITIEEIAHESATD
>AHV93492.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQVRIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHI
>AHV93493.1 3-oxoacyl-[acyl-carrier-] synthase III family protein [Bordetella holmesii ATCC 51541]
MKYSVIAGSGGYLPERVVSNDDLAAELAKRDIQTSDEWIVERTGIRQRHLADRGVTTSVLATEAARRAMADAGVGPDDLD
LIIVATSTPDFVFPSTACLVQANLGAKGRAAFDVQAVCSGFVYALTTADSFVRAGRARCALVIGAEVFSRILDWNDRSTC
VLFGDGAGAVVLKASDEPGVLAAHLHADGSQTKILCAAGNVAYGAVTGDPFLRMDGQAVFKQAVTVLDRSAREVCAEVGM
TIDQVDWLVPHQANVRILNFLARKLNVSADHVVVTVDQHANTSAASVPLALDVARRDGRIKAGQHVLMQGVGGGFTWGSV
LARM
>AHV93494.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MSVTAFLVQLLNGLAEASSLFLVAAGLSLIFGVTRLVNFAHGSLYMLGVYGAYSLVQWIGGGAVGYWFGVLAAALAVGAL
GAVIEMVLLRRLYRAPELFQLLATFALVLLINDACLWIWGAEDLLGPRAPGLEGAIDLLGRRYPTYNLVLIVAGPMVLGL
LWALLTRPRWGRLVRAAAQDREMLGALGVNQAWLFTGVFALGAMLAGLGGALQLPREPASLSLDLRIIGDAFVVVVVGGL
GSLPGAYVAALLIAELKAVCIALGTVHWAGFTVSFSKLTLVVEFLVMAVVLVARPWGLFGKPQAVSRSGASAEAPLRRAS
RSMRAGFAGVLLLLALLPLVSPWLPYAVVLAQDMLIAVLFAASLHFIMGPAGMHSFGHAAYFGLGAYAAALLLKTVALPM
EAALLFAPLAAGLGALVFGWFCVRLSGVYLAMLTLAFAQIMWSVVFQWDGLTGGSNGIIGVWPSSWLGGSAYYYLVLCIA
AASLWALRHILFSPFGYALRAARDSSLRAESIGINVNAVQWAAFVVAGWFGGVAGALFAFSKGSVSPDVMAVGKSVDGLV
MVLLGGIQSLAGPVVGAASFTLLQDYVMRATEYWRALLGAVILLLVLAFPQGLAGIWRSLTRHKAPA
>AHV93495.1 palC domain protein [Bordetella holmesii ATCC 51541]
MRIKWWPWGLLTVACLVLLLFFVIYPLAVLFGNSVTGASGGFSLEGFTALAQDGEYLQALRNTLVLGAVVTGCTVLVGVP
FAYMVARYDFPLKNLVAILPILTIVIPEIIVGQSWLLVLGNNGLLTNALREIGIDLPSFYGWSGMIFSMTLVYYTYIYLG
VLAALRGFDGQLEEAGLSLAPPVAYPHPRHGPSHRSGRSGQCTGGIHAGRW
>AHV93496.1 hypothetical protein D560_0407 [Bordetella holmesii ATCC 51541]
MGKTLEWGINVHMGQEFGLTNQIVLSLACLGIVLLSVSGAIMWWKRRPAGGWAFRPPRSRHAPCVASCSSWWLAV
>AHV93497.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MTDTFAILTGASRGLGAALARGLLRPGTELVTLARNTDPELARLAREQGVTLKQVQVDLADSQAAARAAAELVIPRDAKR
YVLINNAGTVHPVANTAALNDAAAIGQALALNVTAVMLLTARFLQAVDGLSAERRIINISSGAGRNPTAGWGVYCATKAA
VDMYSRVLKTEHGASGVRVVSLAPGIVDTGMQADIRSSDPQAFPGLTRFQDFHATGKLSAPADVAANSLAYLDREDFGQT
EIDDIRNYH
>AHV93498.1 pyruvate kinase [Bordetella holmesii ATCC 51541]
MIGALIDAGMDVARLNFSHGSADDHRERARTIRRLAAERGRFVAIMGDLQGPKIRIARFADKQVTLAVGQPFTLSRTHPK
DAGNATVVGIDFPELVHDCRPGDELLLDDGRIVLQVDRVVGDEVHTTVTVGGSLSNNKGINRRGGGISAPSLTDKDREDI
RLAAELALDYVAVSFPRYGHDIDEARALVRAAGSEAWIIAKIERAEAVADDEALDSLIRASDGVMVGRGDLGVEVGDAEL
VGIQKRIIQHARTLNKLVITATQMMESMISSPMPTRAEVSDVANAVLDYTDAVMLSAESASGQYPVQAVQAMARICLGAE
KHPTTTHSHHRLGETFTRCDETIALAAMYAANHFPGVKAIIALTESGHTPLIMSRIRSGVPIYCYSPHPLTQNRAALLRG
VYTVPFAPADYEPAELSDAAIEALKQRGRVETGDWVILTKGDFYRDSGGTNGMKILRVE
>AHV93499.1 DNA polymerase III, delta subunit [Bordetella holmesii ATCC 51541]
MAQHLDADGLLDHLRRGPLAALYTLSGDEPLLVTEAGDALRAAARKAGFTDRSSLVMDARGDWSAVLAATQSVSLFGDRR
LLEIKIPTGKPGKTGADTLTRLAEQAERQPDADTLIVVSLPRLDRATRESKWAQALARSGISADIPTIERTRLPAWVGAR
LARQNQRVDGATLQWMADKVEGNLLAAHQEILKLGLLYPEGEIAAEDVERAVLNVARYDVFGLRDAMLAGDIARTVRMLD
GLRAEGEALPLVLWAVGEEIRLLARIAEARQHRQDVGALMRRLRIFGAHERLALQALGRVPPQAWPAAVQHAHEVDRLIK
GLTVPGRLTDPWEEMTRLTLRVAATGARA
>AHV93500.1 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein [Bordetella holmesii ATCC 51541]
MTLFGIVLALIGLALAAGGARLVSLGGSWYYLIAGLGMLASGILLIRRRSSGAWLYTIVFVATVIWSLWEVGTDFWQLVP
RLIGPIVLALITLLIWPALHNDGTRSRVRRNAYPLAGVALLALIGFGVGMFRPQGVIRTEARAQPAAETTPQPVADWQYY
GRTPSGTRYAPLTQIEPQNVDKLEVAWTFRTGDVASSGAENQNTPIQIGDTLYVCTPHNKVFALDADTGKERWRFDPEAS
SPVWQRCRGVGYYETAAAPAAGDAQPAACRKRIILSTIDSRLIALDADTGKPCEDFGSHGSVDLKQGMGEIKPGYYFQTS
APTVVRNMIVIGGWVFDNRAIDEPSGAVRAFNADTGELTWAWDMADPSITGLPPEGKTYTRGTPNVWSTPAFDDQLGLLY
LPTGNSPPDFWGAHRSKAAEKYASSVVALDIATGRERWVFQTVHHDLWDYDVASQPALYDIPDGKGGMQHALIQVTKRGQ
IFLLDRATGKPLAEVKELPVPQGAQQGDWTSPTQPYSVGMPAIGTQPLSEAKMWGGTFFDQLWCRIEFKKMRYEGEFTPP
STHRSLQYPGYYGGMNWGSASVDESRGYLIVNDIRMPQWIQLIPRADADKEGAAGVHDGFAPQTGTPYGVSKNGFMSPLG
VPCHAPPYGTLSAIDLKSRQLMWQVPMSTLQDTGPLGMKTGLQIPIGMPTLGGPLTTASGLVFYAGTQDYYLRAMDTTSG
KELWKARLPVGAQATPMSFVSPKSGRQFVVLSVGGARQSPDRGDYVIAYALPGKP
>AHV93501.1 glutamate-1-semialdehyde-2,1-aminomutase [Bordetella holmesii ATCC 51541]
MSQNAELFERACRSIPGGVNSPVRAFRSVGGTPRFIKRALGPHIWDAEGKQYIDYIGSWGPAILGHAHPEVVRAVQDAAT
GGLSFGAPTEAEIELAELLIERLPSMQQVRLVSSGTEATMTAIRLARGATGRNKIIKFEGCYHGHSDSLLVKAGSGLLTL
GNPSSAGVPPEFVSHTITLDYNNLPAVQTAFAEHAADIACIIVEPVAGNMNLIKPAAGFLQGLRDLCTQHGSILIFDEVM
TGFRVGPQGVQGLTGIQPDLTTLAKVIGGGMPVGAFGGSAELMRHIAPLGGVYQAGTLSGNPVAVAAGLATMRLLGQPGF
YEDLSARTQRLALGLTERARAAGVPFSADAIGGMFGLYFMPSVPSTFAEVSTADTNAFKRFSTPCWIVACISPPRPSRPV
LSRPLTMTRSCKPRWTTPKRCSSCSNSRPERPRLTSRPRLLPGAFFWFIEEYRGMQTGS
>AHV93502.1 efflux transporter, RND family, MFP subunit [Bordetella holmesii ATCC 51541]
MHESSLPASHRRRWIGIALVVIVLAAVAWVVLKPAKQANRMGRPGGPGPGGAAGMMNMAIPVKVAEARSQDIDIVLRALG
TVTAYNTVTVKPQVSGELVKVAFTEGQMVKAGDLLAQVDPRPFEVALAQAQGQQQQNLAQLENAKRDLQRYQTLFKQDSI
ARQQLDTQAALVRQYEGSVKSDQAAVDSAKLNLAYSRITAPISGRLGLRQVDQGNLVSSSDTNGLVVITQTQPISVVFTL
PETQLQQVLEQVRAGKTLPVQAYDRADTRRIASGVLETIDNQIDVSTGTVKLKARFDNADQTLFPNQFVNVHLLVETRSG
VTALPTAAVQQGSVGSFVFQVLADDTVAVKPLKLGAINAGWVAVNEGLAPGDRVVTEGTDRLRAGSKVQINTPSPNRAPA
AAGQPQAAQAGRPHAAR
>AHV93503.1 indole-3-glycerol phosphate synthase family protein [Bordetella holmesii ATCC 51541]
MNDILAKILAIKVEEVATARQLRSEAELLREAQARQDVRGFAQAIEDKISQGKAGVIAEIKKASPSKGVLRENFNPAEIA
ASYAVHGAACLSVLTDVQFFQGSHDNLRRARAACSLPVLRKDFIVDPYQIISARAMGADCVLLIVAALTPAQLRDYEALA
LDLGLDVLVEVHDERELEIALSMKTPLLGINNRNLRTFETRLDTTLNLLPRVPAGKRVVTESGILNPEDVQLMRQHDVHA
FLVGETFMRADDPGVELARLLG
>AHV93504.1 hypothetical protein D560_3419 [Bordetella holmesii ATCC 51541]
MYPHLCHTPLKPAPQDPGPEPGDIPVDPDSDQPELDRPFAA
>AHV93505.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLITHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHYYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV93506.1 DNA polymerase III, beta subunit [Bordetella holmesii ATCC 51541]
MQLVQTTRDALLKPLSTVAGIVERRHTLPILANILMRKEGNKVAFIATDLEVQITTHADFGVGADNESTTVAARKLLDIL
KALPDTGDVRLALASNKLSVQSAKSRFALQTLAASEFPTVAQPENWDVSLSMPQRTLRHLFNMVHFAMAQQDIRYYLNGM
LLVFEPGRVRAVATDGHRLAHCATEADGIAERHEVIVPRKTVLEMQRLLEDSDEAVSIDVAPGQIRFRFGDVELVSKLVE
GKFPDFSRVIPTNYTRHFSVSREALQGSLQRAAILTTDKFKGVRLQLGENVMKISSSNAEQEEAQEEIDIDYGYEALDVG
FNVSYLLDVLANVKVENVQWSVMPDANASALITLAGDDQFKYVVMPMRI
>AHV93507.1 HAD hydrolase, IA, variant 1 family protein [Bordetella holmesii ATCC 51541]
MSYAMVVFDWDGTLMDSTHSIVAAIQAAARDLDLPVPTASEASWVIGLSLESALKRAVPQLTPALMPRFLERYHIHYLLR
DPELRLFEGVRELLDSLASQNVRLAVATGKSRVGLNRVLAATGLGPVFDATRTADETFSKLHPEMLHQIMSDLDVDPARV
VMVGDTTHDLQMALNAGVHGLGVSYGAHSLDELQACAAQAIVHSVPEMAQWLTPRIAG
>AHV93508.1 ribosomal L5 family protein [Bordetella holmesii ATCC 51541]
MADKKVIEHAVSDLTKIAGQKPVITKTRKAIAGFKIRENYPIGCMVTLRGQRMYEFLDRLVAVALPRVRDFRGISGRAFD
GRGNYNIGVKEQIIFPEIEYDKIDALRGLNISITTSAKTDEEAKALLTAFSFPFRN
>AHV93509.1 DNA polymerase III, alpha subunit [Bordetella holmesii ATCC 51541]
MVADLFTSALPAYAELDCLSNFSFLTGASHPEELVERAAKLGYTALALTDECSLAGVVRAHVQAAKHPDLQLIIGSRMAL
DNGNHAPIELVLLAQDKEGYGNLAELITLGRSRAEKGRYLLRPADLVTPAARGLAGCLAILTPPYGQAPAEMTAQAHWLA
RHFRGRAWVGLSQLQRSRDDLHRAAVQQAAQAAGLPLVAIGQVHMHVRSRKPLHDTLTAIRSGRSVAQCGYDLAANAERH
LRSRLRLAGLYPAEALAQTQVIAQRCDFCLDEIRYEYPDEIVPQGETPTSYLRRVTYAGAAERFPAGIPESVSELLEKEL
SLIAELQYEAYFLTVYDIVGFARRQGILCQGRGSAANSAVCYCLGITAVDPSNGNALFERFISKERNEPPDIDVDFEHQR
REEVIQYIYAKYGRARAALTAVVISYRPRSVLRDTGRALGLDSAIIDAVARAHQWWDGKKEMLRTLHQCGLDPSSRIARQ
WAILAETLMGFPRHLSQHPGGFVISRGKLSRLVPIENAAMDGRSVVQWDKDDLDALNLLKVDVLALGMLSMLRRALGMAG
QRRGLPLALHQIPPDDTPTYDMICRADTVGTFQIESRAQMSMLPRLQPRCYYDLVVQVAIVRPGPIQGGMVHPYLRRRQG
KEAIVSPGQAVEEVLRRTMGVPIFQEQVMQIAVAAAGFTPGEADQLRRSMAAWRRKGGVDRFRLKLINGLVANDYSLEFA
EALFRQIEGFGEYGFPESHAASFAQLAYASAWLKCHEPEAFLAALLNSQPMGFYAPAQLVQDARRHGVVVLPTDITISGW
EAGFEPLAGQTRPAVRLGLNQIKGLKEAAGSRIEHARRQQPFTDVADLGRRAGLNRQELDALAAADALRPLAGHRRQARW
QSAVGVHSRDLLHHAPILETERPLLAAPSEGQTVVADYDSTGLTLRRHPVALLRANLAARRFEPAEVLNTYPDRRLARAC
GIVTVRQRSQTAKGTIFVTIEDETGPVNVVVRNELIERQRRELLGAVLLGVYGTWQNIDGVRNLVAQRLVDMSALLRELD
EDGLQARSRNFH
>AHV93510.1 lactonase, 7-bladed beta-propeller family protein [Bordetella holmesii ATCC 51541]
MLLSLSAAAAPIFVLNSLNANVSIIDPATYTELRRVPTGKEPHHLYLTPDEKSLMVANALSDTITLMDPRTGEIQRTLTG
IVDPYQLRFSPDMKWFVTAANRLDHIDIYEYKPLGQGKGFDLKLVKRVSAGKTPSHIAIDSKSKVTYVSLQDSDQVMAID
LATQKPLWTIPVGKTPADVFITADDKTLLVALTGDNYVEAYDLTARPAKLIKRIKAGAGAHAFRAQGDGRHLFVSNRSAN
TISRIDTRALEVTDTFAAPGGPDCMDVSKDGKLLFVTSRWAGKLTIIDLEKKTVSKQVRVGKSPHGVWTLNHAPAR
>AHV93511.1 peptidoglycan-associated lipoprotein [Bordetella holmesii ATCC 51541]
MKSRIAKSLTIAALAATLAACSSVPLDDKAGQGGGTQGSTTGQILDPFNPQSILAQQRSVYFDFDSYGVSDQYRGLVETH
ARYLASHPQQHIKIEGNTDARGGAEYNLALGQRRADAVRRMMTLLGVADAQIETISFGKEKPKALGTTEADYAENRRADI
VYQR
>AHV93512.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MPDTDPDSDFRLRAIAIPAFGPSLLYGVSNGAILPVIALSARDLGASMAASGFIVALVGVGSLVSNIPAALFTARHGELR
SMVAASLVSAVAMLLCIFASSIWALAAGVFMVGVASSVFLLARQGYMVDAVPVWMRARALSTLAGTMRIGVFVGPFAGAA
LIHLIDLQGAYWVALVAVLGAGAIAAVAPDMKTPAAAGAVPLARPRMHEVFRAHRQVYLTLGLGILLVSAVRASRQVVIP
LWADHLGIDAAVTSLIYGLVAAVDMSVFYPAGVLMDRRGRRAVALPSALMMGLAFIGIALSGGTVAFVVTAMLLGLGNGI
SSGIVMTLGADASPAHGRTEFLGIWRFMADLGSSLGPVLLSALTALVSLAAGVAAMGALGLAAAAVFWRRLPRGPAQR
>AHV93513.1 bacterial lipid A biosynthesis acyltransferase family protein [Bordetella holmesii ATCC 51541]
MSSDFKTRALTGLLRWFAGMSPRARQRAGACAGWLALHLAKSRVHIVRRNLEICFPDESPQTRQRWTREHFRALGQSIVD
RGVLWYGSPDAIREMVTVSGADTINMLAASGRPVILLAPHFIGLDVAATRLTMEVPSGATMYTPQSDAAVDAIVRAGRMR
FNEVFLVSRKDGVRDLIRHFRQARPVYYLPDMDFGRNGSAFVPFFGVPAATLVATAQLARKWNAAVLPILDFWDPASGRY
HVEVLPPLADFPGQDSLEDATARLNRELESWIRRCPSQYYWVHRRFKTRPEGSPKLY
>AHV93514.1 ribonuclease HII family protein [Bordetella holmesii ATCC 51541]
MAGVDEAGRGPLAGAVYAAAVMLDPQRPIEGLADSKVLKAGRREVLAETIKAEALAWCIASASVEEIDSLNILRATLLAM
RRAVLGLGRAPQLALVDGNQAPTLHCTVQTVVKGDALVPAISAASILAKTARDSDLLRLHTLYPQYAFDQHKGYGTALHL
ERLRAHGPCPEHRRSFAPIKAFGAVL
>AHV93515.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIRKLEDELGVTLFERGGAEVGVTPIGQRIVAQAQKVLEESASIKE
IARQGHDPLEGPLRVGVIHTIGPYLLPRLVPEQIARTPQMPLLLQENFTVRLVELLRQGEIDCAIMALPLPEAGLVTQPL
YDEPFLVAVPHDHEWAQRKSIDAQDLKQQTMLLLGSGHCFRDQVLEVCPELSRFSATSDGIQRTFEGSSLETIRHMVAAG
IGVTVLPVTAVPEHPSSKSLLSYVPFEGQAPTRRVVLAWRRSFPRLTAVEALAQAVYACGLPGVTMLNDEAVSAQDQAA
>AHV93516.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MRFFRPLLAAGLIAAAAGAAHGQDTGNWPRAKPITLIVPYAPGGFADTRVRILARKLGEALQQTVVVENKAGAGGVIGTN
LIAKAAPDGYTIGTGNLAPLTVNPSLMPDVPYQVDKDLAPVILIENSPLVLSVNNEVPVKNLAELIALAKTSPGKLTFGS
SGVGGAHHLSGEMFREQANIDIVHVPYKGGSLAATDLMGGHITMMFEMGYSALPAIRGKKIHPIAVTSAKRLDVLPEVPT
MAESGVPGFESYNWQGIVAPAGTPAPIIARLNTEFNRILKDPEVQKAISDTGSQAGGGSPEAFGTFIRDETAKWARVIKA
GNITLQ
>AHV93517.1 marC integral membrane family protein [Bordetella holmesii ATCC 51541]
MTTGASNSTRSALAKRVAVNVAAMLIVAMVASNVVLSFFGISLAIVRVGGGILVIYSAWRLVNSADGDSGRIARMAEPFT
NETAQARAFYPLTFPITCGPGSIAAAITVGATLSDDDRLVSLLRLGGSLPGVMVVSLTLYVCLRFAAQILHRLGENGTAV
FMRMSAFIMLCLGVQIFWDGARELLLAMLAQSALAIPAPKL
>AHV93518.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MNKNLTAQLRWNNVFNKDYTLVRGYNTPGSTVFLNLAWRM
>AHV93519.1 A predicted alpha-helical domain with a conserved ER motif family protein [Bordetella holmesii ATCC 51541]
MLSRTADHLFWMCHYIERAESTARMLDVNLQMSLLPQDALSRENSWRALLRISELHRHYESRHEELTPASVLHYMVRDPD
NPSSIHACLRAARENARAVRGSLTTELWETYNSTWLELQKHLGSGLPERNPGEFFEWVKFRSHVARGVTLGTMLEDEALC
FLRLGMHLERADNTARLLDVKFHEGEHGPQNEFYRWSAILSSVSGLEVYRKVYRDVVTPERVAELLILRGDMPRSLLAST
QAVADNLGRVANQRSAQTERHAGMLSAELRFGHVEDILRSGLHGFLETFLARINDLGNRISQDFLLPLST
>AHV93520.1 phosphate acetyl/butaryl transferase family protein [Bordetella holmesii ATCC 51541]
MPNLDTGNITYNMLKMTGSNGVAMGPILLGAARPVHILTTSATVRRIVNMTALAVVDAQQEAEAR
>AHV93521.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93522.1 hypothetical protein D560_1687 [Bordetella holmesii ATCC 51541]
MRNGQIPPWVAALREPLEPLARRWLAHSGAASGQARANQPCLQVQTLTAGQGQPLAASHAPDCFPLQVLILLSAPGRDFT
AGHAIAVEQRPRMQSRPTVLPLEQGSIALCATGPRPLQGHRGPYNTLLRLGIGSVRSGERLSCVLRWRI
>AHV93523.1 gamma-glutamyltransferase [Bordetella holmesii ATCC 51541]
MPRLSARYTVFASLVLALLACGPAWARDVNPEGASGYQAKSLAIAHTYMIATANPLASQAGEAMLARGGSAVDAVIAAQL
VLNLTEPQSSGIGGGAFMLHYDAATHELIAYDSRETAPAAAQADRFLREGKPIPFAEAVNNGRAVATPGLLRGLALAHAD
KGRLPWPDLFAPAIALAEQGFAVSPRLHTLIQSSPQLAAQPAAAAYFLDEQGQAWPEGHVMRNPAFARLLRRIAAEGPDA
FYTGEVAHDIVAAVRSHPQPGDLSEADLAGYEAVRREPICGRYRGYRLCGPPPPSSGPLAVLQILGQLQPYRLQGAQSLR
TVHYFAESGRLAFADRDVYVADPQFVPVPTAAMLDPEYLRQRAALIRADRSMRHALPGDPEGLRQARAQDDAFEVPSTSH
LVAVDDHGDIVSMTSTIESAFGSKIFVHGFLLNNEMTDFSSSWRDAQGRLVANRIEGGKRPRSSMAPMIVFRSGKPWLAL
GSPGGSAIINYVAKTLVGVIDGGLDIQAAIALPNMGSRNQATELEQGSALQALAPGLRALGHKVEMVEFTSGVQGIMIEP
GRLAGGADPRREGVALGR
>AHV93524.1 pirin family protein [Bordetella holmesii ATCC 51541]
MNRKAVLERLSAPSPHWVGNGFPVRSLFSYPSLGRRLSPFLLLDYAGPATFAGDGVRRGVGEHPHRGFETVTIVYAGEVA
HR
>AHV93525.1 bacterial transcriptional regulator family protein [Bordetella holmesii ATCC 51541]
MPATDDDPLYIASLGKSMQVLEAFRHAHDSLGLTDLVRLTGLGKSSVQRIVHSWERLGYLDKSPQSRRYVLGPRVVELGY
YFLRSDRLISQAAPHLVALRERCGLAVNMSVLDGQDMIYLLRLPSRQLTLAEMLPGRRMPAWCNSAGRMLLTPFDDDTVA
RFLAQSDIQPYTPRTTTDLLALGQTIAQARRDGHALTQDQVLLNQVGAAVLLRQVPGQARAAINVTASATDYPLARLTQE
IVPLLLQTAYAISSTL
>AHV93526.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MSLFSSSSLLRHGVLWRMAWAVAASLLIWSLLAWAMF
>AHV93527.1 sirA-like family protein [Bordetella holmesii ATCC 51541]
MSDSDFAALPVASELDVSGLTCPLPILRAKKALTQLESGQTLRVITTDPKAERDFQAFCQQSGNLLLGQDVQGDSIAHYV
RRR
>AHV93528.1 acetoacetyl-CoA reductase [Bordetella holmesii ATCC 51541]
MSGKLAYVTGGMGGIGTAICQRLAKDGFRVVAGCGPSRNYQQWLDEQAAQGFTFYASVGNVSDWDSTVEAFNRIKSELGE
VDILVNNAGITRDGLFRKMTVDDWRAVIDTNLNSLFNVTKQVMDAMVDRQWGRIINISSVNGQKGQFGQTNYSTAKAGIH
GFTMALAQEVASKGITVNTISPGYIGTDMVRAIRPDMLEKIVATIPVRRLGTPEEIASMCSWLASDESGFATGADFSLNG
GLHMG
>AHV93529.1 alanine dehydrogenase/PNT, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MLPPPETVKKCVSARHSVIVERGAGAAARYPDEAYLAAGATLANTADALGAPVVFKVRAPAPEELRLMRAGSVLAGMLDP
FDADSLAQMAQAGLTAFALESAPRTTRAQSLDVLSSQANLAGYKAVLLAADHSARLFPMMMTAAGTVKAARVVVLGAGVA
GLQAIATARRLGAVVEASDVRPAVREQIESLGAKFIDVPFETEEEREIAQGAGGYARPMPAAWMARQAALVAQRCQQADV
VIATALIPGRPAPVLISAETVAAMKPGAVVVDLAVERGGNCPLSEKGKIVEKHGVTLIGLVNLPGMLATDASALYARNLL
DFLKLITGDGAALNIRRDDDIVAACLVCENGQLTRRS
>AHV93530.1 hypothetical protein D560_3634 [Bordetella holmesii ATCC 51541]
MLARVVIDLYAELALHDDSAVLLVLSEGRTAAAMRQHAVAIGLSEDQVIFAPTITDAVSREQLLRQVHIALFPYWPTRAD
HTAVPACAALLEAMSLGCARLLGR
>AHV93531.1 ribosomal protein L33 [Bordetella holmesii ATCC 51541]
MAKGIREKIKLESTAGTGHFYTTTKNKRNMPEKMLIKKFDPVARKHVDYKETKLK
>AHV93532.1 hypothetical protein D560_3616 [Bordetella holmesii ATCC 51541]
MGLGKNGGLCRECMNRRDPTAGQSKVSALPRRMRHRAEAWALPP
>AHV93533.1 fecCD transport family protein [Bordetella holmesii ATCC 51541]
MIAGLVAPFTYDYMIKAMWVSALVGMVCAFLSAYLMLKGWSLIGDALSHAIVPGVAGAYMLGLPFSGGAFLAGLLASAAM
LFIKQRTALKENVVTGLVFAGFFGLGLFMASLSPAAVNLQTIIMGNILAITPEDTLQLAIIGFVSLAILLCKWKDLMVTF
FDENHAWTTGINPRVIKAVFFSLLAACTVAAMQTVGAFLVVAMVVTPGATAYLLTDRFGHLLILSVIIGAATSFIGAYAS
YFLDGATGGIIVLLQTLCFLLAFVFAPKHGRLAAHRRAALEAS
>AHV93534.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MQAILTPSTTAAQPLDRHAVYRKIALHIMPFLMLCYVAAYLDRINIGFAKLHMLNDLGFSDAIYGLGAGLFFIGYLIFEV
PSNLLMMRIGAKKTISRIMILWGFISAAFAFVETPTQFYVLRFLLGAAEAGFYPGVILYLTYWFPTNKRAKMVALFVGAV
PLSGMIGAPLSGAIIGLGHGAHGLSGWQWMFLIEAVPSLILGLLCLKFLADTPAKAGWLSAAERQLVQDELQAEKALTQH
DKSTGSLAATLRDRRVWKMTMICFCSAICSYGVSFWLPTLVQQLNVGDVMHVGLYTAVPFTAAFVIMYLIGRSSDRMRER
RWHLVGPFSCVCVGLIGSVIFHDSMGLALLSLTVAAVGAYSTTSMLFTIPGLFLSGVGMAAGVAMINCFGGLGGFVSPYV
VGLVKDMTGSTDNGVIFIATIALVGAALTLTLPKKLVNR
>AHV93535.1 hypothetical protein D560_3028 [Bordetella holmesii ATCC 51541]
MRIELLRARAAIERESLAQSIAETGQALEPANLVRGLLPKLTRGNTSQWVLQAYNLARRYPIVSSAASALFMGGGKRLGL
LRWAGIGLAGWQLARTWLKSDKRDHG
>AHV93536.1 response regulator [Bordetella holmesii ATCC 51541]
MDSPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDANDLPARITRYAPDLLVLDRMLPGGDGADACRRLREQGEDIPV
ILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALIKDQPVTFGPFLFDPTTRQLLRDGTMVKLT
GGEINLLEALVRNAGKPLSRERLLALARDDDSGERNDRAIDIAILRLRRAIEDDPKQPRWIQTVWGIGYRFSP
>AHV93537.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MMLHTPIARESDFEGLAMLRLAAIRASLQALGRFDPQRSHQRLRAGFIPALTRHILVDGVRAGFYILNDRQPVWRLTHFY
LAPDYSGHGIGSRLLAELCARARTLRASIELAALKGSRSNAFYLAHGFEKIGESQWDVEYRYLP
>AHV93538.1 hypothetical protein D560_1856 [Bordetella holmesii ATCC 51541]
MSITVLKPGMLSTFQDEGRYGYQHQGIPVAGAMDERAHRLANLLAGNSAQPATLEITLTGPTLRFDSAACFALAGADLDA
TLDGKPLCMHRPLIARPGSVLAFGAPVQGARSYLAVYGGFALDPVMDSSSTYLRSGFGGWQGRALRKDDRVGLARPLRAQ
SDVLDPLAQALWDTRIYLPATLRNTPRDVLRVLPGPHWAEFSERTRTDFLSQAFRISAQSDRMGYRLQGPSLLMEQPRQI
LSEATCFGTIQVPAGGEAIVLMADRQTTGGYPKLAQIASVDLPSLAQRMPGEQVRFALIELEQAQELDAARARAFDELHA
GLQSLRDPLLQSIALKEART
>AHV93539.1 ATP synthase F1, beta subunit [Bordetella holmesii ATCC 51541]
MSNGTIVQCIGAVVDIQFPRDAMPKIYEALTLADEGSSFAEKGLTFEVQQQLGDGVVRTIALGSSDGLRRGMPVNRTGAP
ISVPVGHGTLGRIMDVLGRPIDEAGPIQADEKRAIHQHAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVG
KTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEG
RDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFQH
LDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILGMDELSPEDKQAVARAR
KIQRFLSQPFHVAEVFTGSPGKYVPLAETIRGFKMIVEGECDTLPEQAFYMVGTIDEAFEKAKKLQ
>AHV93540.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MKVYDAYSLFGPLPRQAEFMEAAAGILARVSPLKRLRGLRGNSPGWEADIWRQLAEAGWTSVTVPEALGGLGLGIDVLGA
MATAVGEAPLPEPYLGAGVLPALVLPPFADHPLAADLLQSVVSGQAVLGLVWQEEAGELLPSSVSTSVAREGDRIHLIGV
KRWVAPVGATGWLVHSRLGESPTLVWVRPDDPGVRVDNELRVDGSMLCTLHLDTIIPESRMIGQGARVDDICITALETAR
LLQCSELYGIARRVYTLTLDYLKTRVQFGRPIGANQALQHRMVDAYVSVQVCGALLAESYHQAQQFPQSLGRQAALAKTR
IADRVIALCREAVQLHGAIGYTDEYDIGLYLKRALQTASWLGSPRTLLARYYTLRPQRDAVQDEPLAEGKDYNAMSDEAF
RQRVRGFLREHYPQALRHVPRRLRLAEVREWYMTLSRHGWLAPAWPREFDGMALSPAKLLIFFEEMEGWGVVRLPDQGII
NLGPVLIQHGSAEQKARYLPRILSGQDIWCQGYSEPNAGSDLASLRTEARRDGNHFVVNGQKIWTTLAHDANHIFALVRT
DTSGKPQAGISFLLIDLATPGVTIRPITNIVGEQEFCEVFFENVRVPAENLVGGLNQGWAIAKDLLGYERVFAGSPQQSR
QALHNLEQLAHSQSLFELPEFSQAYSALLAQVAELEALYCLFADVVRRGELLPASVSGLKVLATETYVGIAREIVRWADE
TGGTWSGVPMTDGTPLIPAAPFLQSLVTTIYGGSNEIQRNIVAKAVLGL
>AHV93541.1 aconitase family protein [Bordetella holmesii ATCC 51541]
MTAQTLAQKLLAAAAGRDAALPGEIITCKVALAMFHDSSGPRRLQPMLQDLDTGLWDRNKVVLVMDHYVPEADDESRRIV
RIARDWAQEQRLPHVYDSVGICHVVLPEHGHIRPGMFCVGGDSHSPTGGAFGPICSA
>AHV93542.1 bacterial extracellular solute-binding s, 3 family protein [Bordetella holmesii ATCC 51541]
MKPAWLPPLFLAVAAMCGASVQAQEVFAPARARGELRVGVPALAPAPLAGAKVRTPEGLAVPAAARLAARLNLPLVLVEV
PASQAQAALTEGRADVVLAEQTVGSPPSQGWISARVSMQPKAVIRSDTPLRIWPQVAGKRVCMAQSNLRAQTLAVAHDAR
VQTYRAPSDALVAVREGQCDIALIDGTVWTALMRFPEWRKFSSTLPADGPRADLGWLTSPRDTVWLQNEMRSWQATGAWT
AMAAKWARDVAFDVYLDQEVPDCHG
>AHV93543.1 hypothetical protein D560_1285 [Bordetella holmesii ATCC 51541]
MMNIPPEDSLIEYPSDFPIKVMGKQHPDFAQTLTGVVLQFDPDFDPASVEMRPSKGGNYMGLTFTVRAVSREQLDALYRA
LHGHPMVSIVL
>AHV93544.1 META domain protein [Bordetella holmesii ATCC 51541]
MSVISIPRAMVCAGVLVAAAGCATHTGQARPEGAAAANATTSADSLAQTRWELTSWVDALGNPRNLAHGDNGEPISLTFL
ADGKRYVAQGFAGCNRYSATYKLEAGKLTITAPASTRMACPDPRRAQLEADYLRALADIRSFTLDASGAPRHLTFNVASG
DVLDFTRRKDPPTP
>AHV93545.1 bacterial regulatory s, luxR family protein [Bordetella holmesii ATCC 51541]
MSNNISHLPGQDRPEDAADPGYGVRRYMLLSRPSHKIRVAILDDHPAITLGLAAYLRNQTDLEVRCVETKADALAKTLKQ
NPCDVAVVDFYLPRQPWDGMDFIRRLRRQHPEMAIVTFSAGKNSETEFAAYRAGANAYLPKEASVETLVEVIRQTAADRR
QFLGWKDGRSQITEPAHPDSQLTTAELEVLRQISQGLSVTQVASRLLRSKKTISTHKRRAMKKLGLADDLALALYLNEKF
EQNICG
>AHV93546.1 tetraacyldisaccharide 4'-kinase [Bordetella holmesii ATCC 51541]
MIVIGNIYVGGTGKTPVVMAVLQGLRDRGYTPGMVSRGYGVRIDGPPRVGQGELSPAAFGDEPTLIAAVTGAAVAVHPRR
ADAAQALLAAHPEIDVIVADDGLQHLALARDIEIVVQDERGCGNGLLLPAGPLREPASRLATVDAVITNMNTGPARAPDQ
TAAPQWAMWLEPEDARRVSDGLRRPLSAFTGQTVAAAAGIGNPDRFFRTLESAGLVPTPRLALPDHYDYAHSPFGDLHAD
AIFITTKDAVKCARFNDPRLWAVQVRARFSGPDFLDWLAARLQALPAR
>AHV93547.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MRIGIFGAEPWTGQMRQDIEGQAGIDAVDIYGLSEVMGPGVASECVETKDGPVVWEDHFYAEIINPETGEPVADGESGEL
VFTSLTKEAMPIIRYRTRDLTRLLPPTSRSMRRIGKITGRSDDMLIVRGVNLFPTQVEELVLKITQLAPHYQLVLTRSGN
LDELEILTELRPEFGGLSDAERAAVGKQLQHAVKSYIGVSARIQVAEAGFVERTLTGKARRVIDKRPRG
>AHV93548.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV93549.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MREISLDRLRTLVAIADLGSFAHAARALHLAAPTVSLHIADLEARIGAALLSRRRGQVRPTAIGQTLLERARRLLAEADQ
ALEDVQRQVQGLVGRVRLGASTGAIAHLLPQALETLGRDHPQIDVEVAVLTSQESLTRLAQGTLDTALIALPQAPVAGLP
VLPWRRDPVMAFLPASWHPPARVTPQWLAQRPLILNDASTRLSRLTTEWFGAAGLPVRARIHLNFNDAIKSLVAAGYGAA
LLPQEATAPPPDARIAMRALRPALWRPLGIEHRTGCLDLATRHVLDALTALRQR
>AHV93550.1 lipoyl(octanoyl) transferase [Bordetella holmesii ATCC 51541]
MPVDIAWLDPGAAYAPVWQAMQAFTASRSPVTRDAIWMCEHAPVYTLGQAGREEHILNPAGIEVVRCDRGGQVTYHGPGQ
IVAYSLFDLRRAGMYVRDYVFLLEEAAIAVLRQAGITAVRRTGAPGVYVEQSDGRAAKIAALGIKVRNGCAYHGMALNVA
MDLAPFSGINPCGYEGLRTTDMASCGVSCSPREVGQALADELVARLSRFCAQTPAAGAPVTGE
>AHV93551.1 beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family protein [Bordetella holmesii ATCC 51541]
MIEEGHPQVPSDSYVQSFARGLAVIRPFGPDRAQMTLSEVATVAGLTRAGARRILLTLVQLGYVTQEERRFSLTPRILEL
GYAYLSATPLWNLALPYMEEVAQATRESCSVSVLEGTDIVYILRLSTHKVMSINLAVGSRLPAWVTSMGRVLLAGLPSAE
LDRVLAASPIQAYTACTLTTVAQVKDELTRVREQGYACVVQELEPGLQSVAVPIMDRSGRVIAAMNVSGHVSRFSRDEML
RAFLPGLQHAAGQVNQALLRR
>AHV93552.1 resB-like family protein [Bordetella holmesii ATCC 51541]
MRFAISLLMFICVVSLVGTVLPQNRPASSYVDQFGPFWYEVFDKFSIWHVYNSWWFLLIMGFLVVSTSICLIRNGPRMVR
DALSFRDHVRQSSLRAFPERVQVSVAESPPVAQQWLLALLRRQGYAVRQRQDAGGPCWQQKRAAAIVWAISVRMRRSSLS
VWAVCSIVSCPCACRSCSAASSRSRKIC
>AHV93553.1 hypothetical protein D560_2615 [Bordetella holmesii ATCC 51541]
MFSSRGPVRWSRLAAVSLVLAVAGVVSGCATPTVAARVTSFQQWPQGVQGQTYRFQPANAGQKDNLEYQAFQDMVRAGIG
PTGLVEAQAGQNARFLVSFTYGATQTQIMVRRAYDPYFYGGYGGPYFGPRVWGGPWGPAPFWGQDWVEVPAVAFRNGLNL
QIYDTTRGNAEVYRSSAYIVSQREDILRAMPYLVRAIFDNFPGNNGSEREVEFPLNR
>AHV93554.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MKYAFIKAHEEQYAVRRLCAVLGVHPSGYYAWKVQPVSARGAQDKRVGALIEQCWEDSGRIYGYRKISSDLNDMGERCGK
HRVARLMRQAGLRSHTGYGRRPGGRGTRPSVVAPNHLQRQFRVDAPNQVWVTDITYIRTHEGWLYLAAVLDLFSRQIVGW
SMSDRMTRELAINALLAAVWRRKPEAEVLVHSDQGSQFSSHDWQDFLKAHRLRPSMSRRGNCYDNAVAESFFQLLKRERI
RRKIYSTRDQARADVFDYIELFYNPRRRHSYIGQVSPVEFERRYFLMNGTV
>AHV93555.1 L-lactate dehydrogenase [Bordetella holmesii ATCC 51541]
MKIAISDAIAYGEALLSAQGVPQNIAHDVAEHLTESDRVGYTSHGLSILPNYARVLKEGFVRADGRLQLLTDNGSFLAFD
GDNGFGQHVGKMAVQAAIKRTNELGSCILTLRRSHHLGRMGHYGEMVANSGLILLAFTNVINRAPTVAPYGGARACLTTN
PLCFAGPLPGGRPPLIVDMATSSIAVNKARVLATKGEAAPPGSLIDAEGNPTTDPHALFTDPPGALLPFGGHKGYAMGLV
AELLAGVLSGGGTIQPDNPRQGVATNNLFAVLLNPQVDFNASWRTHEVDAFIEYLHACPPQPGVDRVQYPGEYEAANRET
NRDAIDFAPAIWDSLSKLGQTLNVEPPAAYKG
>AHV93556.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MFNILSRTLLAAGLIGASLGAAAQQPPHQYPLKDFFRNPEKGFFRLADDGKTLGFMQPVSIDGSPPRMNIYVQTLAAGQP
QGQARKLTSESARDISNFFWKGSHTVLYQKDFGGDENFHVVAVDIHSGKVTNLTPFEGVRAGIEDDLPDDPDHILISHNQ
RDPQIFDVYRVNVHTGQATRVAENPGNVVGWQTDHQGRVRAAVTSDGLNSTLLYRDDEQSPFRPLITTDYRTSVSPSFFT
FDGKKLYALSNRGRDRLALVVIDPASPDAEEKIFEADTVDLDGAGFSRKRKVLTLAAYQTDKPQYRFFDDETRQLFDKLK
RHLPGYEFALQSWNHAEDTFIVAAYNDRTAGVRYLYDANHDKLHELAVINPALPEADMATVKPIQYTSRDGLTIHGYLTL
PKGRDPKNLACIVNPHGGPWARDGWGYNPEVQFLANRGFCILQMNFRGSTGYGRKFWEASFGQWGLAMQDDITDGVRWLI
DQGIADPKRIGIYGGSYGGYATLAGITFTPDLYAAAVDYVGVSNLFTFMQTIPPYWKPMLAKMQDMVGDPERDKARLTAT
SPALHVDRIKTPLFIAQGAKDPRVNKAESDQVVQALRARGVEVEYMVKDNEGHGFHNEENKFEFYSAMEKFFVDHLKP
>AHV93557.1 large conductance mechanosensitive channel protein [Bordetella holmesii ATCC 51541]
MSKATGFLKEFRDFAVKGNAIDLAVGVIIGAAFSKIVDSIVKDLVMPVINFILGGSVDFTNKFLVLSMPDNYTGPMTYAE
LSKAGANVLAWGNFLTILINFVLLAFVIFWMVKAINRARRPKEEAAPATPEQVVLLREIRDSLKK
>AHV93558.1 hypothetical protein D560_1034 [Bordetella holmesii ATCC 51541]
MTSADQLELSFDAGAPSASIATPCPDPLPAGARWREVQTPQQVIGFVLLRSRRRSIGFVIADDGLRVTAPNWVTLAQIDD
AVREKARWILSKLRDWHARREQLAMSQTRWQAGGELPYLGKRIIIGLAADGRQAHLDGDAANPLDGATLWLPLPATADAS
RIRGAAQAWLQQRAGILFGERLAHFLMRTGLQIRRWRLSSAATRWGSCTSDGNIMLNWRLIHFSPDIIDYVIAHELAHLR
EMNHSQDFWAEVGHILPGFEAAKKVLRRHDPATLPRF
>AHV93559.1 metallo-beta-lactamase superfamily protein [Bordetella holmesii ATCC 51541]
MNPNEQKLQYPWGDTQPEPARAQEVAPGVKWLRMPLPFALDHINLWFLRDEIEGRQGWTIVDCGISRDEVKALWEQVFEH
ELEGLPVLRVLVTHMHPDHVGLADWLCQRWQAPLWMSMTDFMVASLWSSRSGGSGAGGEGAVAHFARHGLTDPAAQEQIR
QRAGYYPSLVPAMPARYTRIMDGDLIRIGGHDWRAIVGYGHAPEHMSFFCAALNVLISGDMVLPRISTNISVFDYEPHAN
PLPLYLRSLNAYADLPQDTLVLPSHGRPFRGLHERVAQQQQHHAERLEEVVQACGLAPQSTTDILPVLFRRKLDLHQLTF
AMGEALAHLHALYFEGRLTRATDADGIVRFRAA
>AHV93560.1 penicillin-binding, 1A family protein [Bordetella holmesii ATCC 51541]
MNHAPHSKNRLPNAGGKRRLLLQAGIAAGGLALCGLITLGLALAMAWPSLPELHAMTDYRPRVPLRVYTADKVLIGEFGE
EHRNVLRFDEIPEVMRHAVLAAEDDRFYEHNGIDWTGVLRASLTNLVKMSKTQGASTITMQVARNFYLSSEKTYSRKFYE
LLLTYKIESELTKDQILELYMNQIYLGHRVYGFAAAARTYFGKPLADVTPAEAAMLAGIPKAPSRSNPLSNFDRAKARQG
YVLSRMQALGFLTPEQVTAARGEKISVRGSEGGATHGYAVRGEYPAELARQLMYGVFKEDAYTRGIDVYTTIDSKAQQAA
YRAVRDGVLDYTRRAPYPGPEGQVDLPDGIERDTQAFDDILDGVQEEHADSDGLYSGVVLSASPSEVKVARSSNDIITIN
DKKALAVVARALHPKAASDLRLQRGSVVYLHKTDDGWEIINMPALQAALVSLRPQDGAIRAMVGGFDYFRGSFNRVTQAW
RQPGSTIKPFIYAAALERGFTPGTQISDQPFMLTAAQTGSRDWQPKNDNNQYEPMLTLREGLYRSKNMVSIRLLQAITPQ
YGQDYLTRFGFDRDRWPAVLPIALGAGAATPLQVANAYSVFANGGYLLTPFLIDHVTDRSGKVLMQAKPESAGDESVRAI
DPRTAWVMDDIMHDTTVKGTAARVYRTLKRGDLAGKTGTTNGSVDVWFSGYNRDMVTTVWMGFDQPRSLGSNEFGSGLAL
TTWLDYASPMLKGVAETPRPARPQGLIVDNGNYYFSEFPPGQAIAALDLSTGDSLSDFLNNYRPADDSDTRVRQPGQSAP
PLSIPVPAAPPAARSTSDSAPTAGRLGAIQAPGAIATRPL
>AHV93561.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MNKKAKFAAALLVLMLAGCATAAGGLIGGGVDRASGGDGSAGAMIGAGAGMMIDVLD
>AHV93562.1 YCII-related domain protein [Bordetella holmesii ATCC 51541]
MPYIIETFDKPGSLALRQATRAEHLAFLDANKHLLLACGAKLHEDGTDIDGGLYVVNVDTREEAERLIQADPFHKAELFE
RVAITRWRKAYVDGKSYL
>AHV93563.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93564.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MPFTHLLLALLVVFIWGTNFVVIKWGLADFPPFLFAALRFVLCVVPWLFFFRRPNVPWSAMAAVGVLLGAGQFGLLYWAM
QGSISPGLASLVVQSQVFFTIILAMILAGERPRLGQYAALSLAAAGYLLVAWHSVADPMAAVTLAGLGLVLAAGLCWACA
NTVVRGVGRVNMAAFIVWSSIFAIIPVLGISLLVEGPGRIVDAVTHASWLGWATVFWQAVGNTVLGFGIWNWLLVRHPAA
LVTPLALLVPVFGMVSSTLLLAEPLPGWKILATCLVLCGLALNIYAGRGRRA
>AHV93565.1 fatty acid/phospholipid synthesis protein PlsX [Bordetella holmesii ATCC 51541]
MIRIAIDCMGGDHGLPVTIPAALEFARQYPDTRLLLVGLPDAIEAALAEHRSVPRDRLDVVAASEVVTMDDPVEVALRRK
KDSSMRLAAQAVKDGRADACVSAGNTGAWMAISRYVLKTLDGIDRPAIATSIPNQTGGATTVLDLGANVDCTAEHLLQFA
IMGAALAQAIDHLDRPTVGLLNIGEEVIKGNEVVKEAAELLRASPLNFRGNVEGDDIFKGTVDVVVCDGFVGNVVLKSVE
GLAKMLSSVIREEFKRNFITLLAGAVATPVLNRLRRRVDNRRYNGAALLGLRGVVIKSHGSADAYAYGFALQRAREAVAS
RLLERTAQTVAEINERVQLNEAAANNAAAAGDTV
>AHV93566.1 hypothetical protein D560_0785 [Bordetella holmesii ATCC 51541]
MCPCGSGDVYSGCCGRWHQNESPAPDAASLMRSRYSAFVMDELDYLMTTWHPSTRPAELAPNPPDLKWLGLQVRRHEQDG
EAHAIVEFVARYRQAGRATRLHEISRFECIDGRWYYVDGEFPA
>AHV93567.1 mmgE/PrpD family protein [Bordetella holmesii ATCC 51541]
MTGLTQALGAYIANPEFGPRQAQAEAIARQGMTDTIAVALAASDEDVTRIALEHARSIGGKGQAPLWFGSESLPPAQAAF
VNAVAGHALDYDDVALSGHPSTVLTPAILAQAHVQGASGRDCLRAYIVGYEVWAELTSREPDPYHIKGWHPTAVFGTVAA
TAALAFLRGLKAADAARALAIAASLASGLVANFGTMAKPLHAGRSAALAFEAISLTGLGLTAAFDALEHHAGFLAALSPH
GRADRERPYVRSEPRILKTGLSIKKYPVCYSGHRVIDAVIDLSREHSVNASQVQRVEIGIGRPQASMLRNTAPVTALEAK
FSAQFAVAAALARGKVGLSELDDGFVNEPALRALYGVVDIGLIDEADPEDGAFSRHDTVTITLHDGRVLQSGEIRYPRGH
AHRPLSETELRAKFDDCLAIWRRQPQPADMPAEGILYDRLASLAQVDDVRTLFRS
>AHV93568.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MPDPFPPLASAPSLLASLMSQQFECEAAFVALRLPAADWQIAGLPTADALAFVGRHEGGALLVWPDQDKDAPLFYAGQAW
LDTDGNVQGVVGLLLACPPAPEMRNRLAHFAALAQAQAQLLAALRQTEVALQARHADQERVLLAVTGSGTGLWDRNIQTG
EIHYSAGWKALLGYADHEVGSRIEESYGRLHPDDAHYVKAAMQAHFDSTTDAYHVEHRLRCRDGSYRWVASRGRIVAHDE
QGRPLRMMGTTVDITDRKLAEARLHELATTDSLTRLPNRRQLLHYLQTRWQQLQHAPDEPAAVLMLDLDHFKDVNDRHGH
AAGDDALSHFADILRAALLPGDYAGRMGGEEFAVILGQADATRADAFACRILRDTRATPLPGGARALTTSVGLSMMRADD
AGPQTVLARGDLALYRAKALGRNRREWG
>AHV93569.1 hxlR-like helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MPASVIDVDLPALRATAAHCCALLKALANTDRLLLLCQLVEGERNVGQLEALTGIRQPTLSQQLAVLRDEGLVGTRRAGK
YIYYSMASLEGRQVMQTLSGLYCSRSLERAQ
>AHV93570.1 CBS domain protein [Bordetella holmesii ATCC 51541]
MKVSEILRVKGDTLYTATPDTLVSVAIRTMSEQDIGSLVIMESGMLSGMLTFREIMRHLESSDGRVGETTIRAIMDDAPV
SVSPNTSADEVQRLMLDKHARYIPVMDGPTLMGVISFYDMAQAIVAAQQFENNMLKAYIRDWPSDSAATAA
>AHV93571.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MNGMKKTLVAAALFAASTSTWAQDTYPTRPVSIVVGFAAGGSTDLLARTLAKELSDQLKQSFIVENKPGANSNVAHTYVA
RAAADGYTLLMVPFGLAVNQYLYKGQKYTLDSFAPIALVAQVPNVLVVNKNLPVSDVKGYVEYSKANPKAVSYGSPGVGS
SLHLGGELFRQATGAEILHVPFNGSGPSLMAVRAGDVTSAFDNLSTAAPMIRNGDLKALAVTGAKRSDAFPELPTVAESG
YPQYEISSYFGLAAPAGTPPAVVEKLNAAVMKAVASPAFQAQFKTLGAYVDPNTPAEFSAFLNKESEKWKKVVETSGIDL
SN
>AHV93572.1 methionine biosynthesis protein MetW [Bordetella holmesii ATCC 51541]
MALRPDLERIASWIAPASRVLDLGCGDGALLAYLHDHRQVRGAGVEIDDERVIACVRRGVEVIQQNLEDGLALFDDKQFD
TVVLSQTLQSMHRTEHILREMARVSRFGIVSFPNFGYWPHGWSILRGRMPVTGQMPFQWYNTPNIHLCTLKDFEDLARDV
GVRILERATFNDEHEVKVLPGWRSTLAVYRFEA
>AHV93573.1 outer membrane assembly lipoprotein YfgL [Bordetella holmesii ATCC 51541]
MRISLSGRARRGAVVVCGLLALSGCSLFSSSDTRYDPAPLTEYVAGMSVRTVWSQSIGSGSGLGFAPTVLGDAAYAASPD
GSVAKLDLLSGRILWKAAAGSSLSAGAGSDGTTTAVASPGGMIIAFDETGKVKWRAQATSDVAIPPVVGYGVVVVRSGDY
RIQAFDANSGERLWSLQRPGPALALRSVSEMIMAEGMVITGLPGGKLLAINAASGNVQWEGTVATPKGASDLERLTDVVG
SPRIAGPLLCAVAYQGRIVCFDVTQGGRPVWAKDFSSSTGMSIDQRFAFASDQYSVVHAFDLTNGNNAWKQSALKNRGLT
APAFLGEGMAVGDNEGYVHFLSRSDGHLLARLSVGGGAVLSPPQSTPQGVLVQTGNGNLVLIGTN
>AHV93574.1 ubiD decarboxylase family protein [Bordetella holmesii ATCC 51541]
MKYRDLRDFLKQLELKGELKRINAAVSTTLEMTEIADRVLRAGGPALLFEQPMHAGRPAEMPVLANLFGTPGRVAWGMGA
EDVAALRDVGELLASLREPEPPRGFRDALAKVSMLKAALWDMSPKTVRGAPSQEVVWEGNDVDLARLPIQTCWPGDVAPL
LTRGLVITRGPNARRQNLGIYRQQVIGRNKLIMRWLSHRGGALDFRDHRLANPGQPFPIAVALGADPATTLGAVTPVPDS
LSEYQFAGLLRGSRTEVTQALGSTLSVPATAEIVLEGHLLPASDPRALAPQVPEGAPAPPDLGYEMALEGPYGDHTGYYN
EQDWFPVFTVERITMRKNPIYHTTYTGKPPDEPAVLGVALNEVFVPLLRRQLPEIVDFYLPPEGCSYRLAVVSIRKQYAG
HAKRVMFGVWSILRQFMYTKFIVVVDEDVNTRDWAEVIWAMTTRMDPVRDTLLVENTPIDYLDFASPVSGLGGKMGMDAT
NKWPGETQREWGVPIKMDDAVKARVDAMWQELGL
>AHV93575.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MLKRSFLSSALFVGALGMTSTAAAAWPQRQVTLIVPFAAGGAVDSVARALAARMSEGLGQTVVVENRTGASGMIGADYVA
KSKPDGYTLLMGTQSTLAVGPLLMRPDNADPSQSFAGAGMLATAPLLLVANPAFPAKTVAELVAKAKREPGKIDYGSGGV
GSTPHMAGELLGLSTGTKLSHIVYKGEQPALTDVMGNQIPIMFSNLQIALPLVQSGRLKALAISTAKRSPAARTCPPSPK
PLRPGLMRRPGLAWSLPKPRHPR
>AHV93576.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MPSSFADQLEEVLVGAVQEEVPTRDVEEQARSLMQRQVAANDALSAVVHLLEYVRRYPDTELFQVLVARSLEAAHRPDDS
LAVWRGIQHRFPDSADAFILMLRGVKRQLGVDAARQEIEKYFAGGSQAARDILLEAKSWDEIGHPELADAAFARLVDSHP
EFEDGYAVWAQSQNRRGVLWRGREILQLGLKRLGERGRKLTRRLGALDTDLAALTALGVSWSENNVPVSVLVLQRLFQEI
GRRRNEEIDPKPESFVGKVLMINGSLGAGGAERQFVNTAVALQTAMLQGQSIAEHDVLGPIQVVCRSLRSREGADFFAAT
LREHDIPVAVYADMPAWGGSEFASLLAPYREYLRFLPKQIIEGTSKLTDVIRSGAPRVVHIWQDGSIFATALAALLAGVP
RIVLSVRTMPPIDRPDRYRVEYDIIYSELLKMRGVVLSSNSSFAARRYADWLDLDARRIPVVYNGLAPLKSVSDDACVQM
MQAFSARTSEQAFTVGTVMRVDENKRPFLWVEAAQQFARTNPHARFVMVGAGPLLEPVKEFAQRLGISDRILFTGLSRRV
GYWLEQFDAFLLLSRFEGLPNVLIEAQFAGVPVVTTLAGGAGEAVQEGVTGLTLRAENTTAEEVNIALGRLYAMRQDDAD
IGRKARHWARARFSLSQMISATVRCYQGL
>AHV93577.1 carboxyl transferase domain protein [Bordetella holmesii ATCC 51541]
MPIIESRIDTRGADFAANASAMQTVLDDLERQLSATALGGSESARAKHVARGKLLPRDRVEQLIDPGSPFLEFSPLAAHG
MYDGEAPGAGLITGIGRIAGTECVIVCNDATVKGGTYYPMTVKKHLRAQEIAQQNNLPCVYLVDSGGANLPRQDEVFPDR
DHFGRIFYNQAVMSSQGIAQIAVVMGSCTAGGAYVPAMSDESIIVKNQGTIFLGGPPLVKAATGEEVSAEDLGGGDVHTR
LSGVVDHLAANDRHALELARNAVARLNRRKPQPLAPAEPREPRYDPAELNGIIPADTRKPFDVREVIARIVDGSEFDEFK
ARYGTTLVTGFAHIHGMPVGIVANNGILFSESAQKGAHFIELCAQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVTA
VATANVPKFTVLIGGSFGAGNYGMCGRAYSPRMLFMWPNARISVMGGEQAASVLATVKRDGLQSRGTTWSAEEEEAFKAP
IRAQYEREGHPYYATARLWDDGIIAPADTRRVLGLALSAALNAPIEETRFGVFRM
>AHV93578.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MKRIALLVPAGANIASLETARQGFQAANARLRDCGRDPAFSVRLLAAEPTMTLDDGRISVRVDATLASAGQVDICLVPPL
MISDGAGLGQILAANAALIRWLAAHYKEGGELANLCLGAALPAAAGLLDGRRAVVHWAMRNQYAALFPNVSWVCDCVVLA
DKGLYTSGGALSAAHLVLHLIEKHAGRDIAIWCAKLFQLDWDRHSQLPFLVFAGQKAHGDAVVLAVQEHIETHYATRLAV
DGLAVLHAVGRRTLERRFRHATGNSVVEYQQRVRVEAAKQQLERTRKSVSEVMYEVGYSDTKAFRDIFSKHCGMSPLNYR
DRYG
>AHV93579.1 helicase conserved C-terminal domain protein [Bordetella holmesii ATCC 51541]
MTDTSFSSLPLLPALLDNLQGLGFEQMTPIQAESLPLILDGRDLIAQAMTGSGKTAAFGLGVLQTLDVGRLLPQGLVVCP
TRELADQVAQELRRLARLIPNVKILTLCGGAAARPQAESLARGAHLVVGTPGRIQDHLARGSLDLSGLKTLVLDEADRMV
DMGFYDDIVAIAAHCPLKRQTLLFSATYPENIRKLSARFLRNPAEVKVQAQHDANRIEQIFYEIGEDERLDAVVTLLAHF
RSVSTLAFCNTKIRSHDLVERLQAAGISAQALNGDLEQRDRDEILIQFANQSCAVLVATDVAARGLDIQNLGAVINVDVT
KDTEVHVHRIGRSGRGEQKGLALSLCSAEEMRWANLIEQYQGAPLKWADIKALRAKADRPLRAPMITLSIQGGKKDKLRP
GDLLGALTGEGGLTFEQVGKINITEFTSYVALDRQIAKQAFARLSNSNIKGRRFRMRFLEEF
>AHV93580.1 3-dehydroquinate synthase [Bordetella holmesii ATCC 51541]
MNVVEVDTPGGRYPIRIAAGRLDRLDESIPADATAIAIVTNPTVAALYGERAEAALARSGCKVLRIELPDGEVHKDWQTL
NLIFDAMLEHRLDRRAVLVALGGGVIGDMTGFAAAVYMRGVRFVQVPTTLLAQVDSSVGGKTAVNHPLGKNMIGAFYQPV
AVEIDTDVLATLPAREVSAGLAEVIKYGLILDAEFWRWCETHVEDLRALQPEALAYAIRRSCELKAQVVGKDERESGLRA
ILNLGHTFGHAIESGLGYGQWLHGEAVGCGMVQAAELSAQVEGFAADDVRRVRALVQAIGCPVAAPDLGFERWISLMMVD
KKSEAGEIRFVLMPHIGQAGMRTAPEAAIRTALDRTVQTA
>AHV93581.1 tonB family C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSDRRYLLVAIAISLLVHAGLLAWRFTAPPLRRSPAASLEITLVNAHTDTAPLRAQVLAQAAVDGGGNALAGVASTPLPR
TADSPDTIVLQAMRKRQAQLEAEQARLLTQLAAAAAAGAPREPVHPWDETQDPGDSVEDQAGTVQNAQVATLAHRVQAYS
ALPRKTFVAPAAQASPHAAYLDAWRTRIETIGTQHFPAQARGRVYGSLRITVSIRPDGSLAGFDIDQPSPHAVLNQAARR
IVQMAAPFAPFPPELARDTDVLVITRTWHFVNDTLETSAP
>AHV93582.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MALVTGSSRGIGEAVARGLAREGATVIIHGRNPSRTASVVQDILAQGGQAHGVTGDLTDENQTAHLLDQAKSLGVDILVN
NAGGSGQPEDWTDTRTDSWAASFDRNVLAAVRAISALLPGMRAARWGRIVNISSMAALMPAASRPDYSAAKAAMHAMTAS
LAKTVASEGITVNTLSPGTIHSESLDRAFRQAAAERGMDADAPWPDIERAMLPVFAPIPMGRVGTLEEITDAIAFLVSPR
AAYITGANLRLDGGMWPGL
>AHV93583.1 thioredoxin family protein [Bordetella holmesii ATCC 51541]
MLVMLLAGARLAQAADEAEFLAPERAFQLTASQPAADLLELHFKVAPGYYLYRERFELSGQPVEAINSAAAVFPTGEVKY
DPTFDKDMEVYHHDVVIRVPLALTGQPARLRVTSQGCADAGLCYPPMSQQVALTPEGASYAVNVSAIDPGQMAERPEATT
AAAPTAAPATGQPTASGSGLGALLEAGDVGLAGALGGLGVLGAAGVFFVLGLLLAFTPCVLPMIPILSSIIVGRDAQVVT
SKRRGLGLAAAYVLGMSVVYTVLGVAAGLSGAGLAAWLQTPWVLVLFALLLALLALAMFDAYILQLPAAWQARLSERSNR
VPGGRYTGAWFMGAISALIVGPCVAAPLAGALLYISQTGDVWLGGAALFAMAWGMGVPLLVVGASSGALLPRAGAWMDGV
KRFFGMVLLATAWWMLIPILPAWLLMLGWAVLASVGAVMLRAFEPLPADAGAARMFAKGIGLLFALGALVWVVGAASGAR
DALVPLGQLAARTQIGAPRDEHPSFTRIRTVAELDAALAASTRPVMLDFYADWCVSCREMERFTFSDPGVAQRMAGMLLL
QADVTQNNAEDRALLKRFKLFGPPGILFFAPGGRLLEQPRVVGFQDAARFSASLDQAAAEAQH
>AHV93584.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MSATVAAVAQSNYPTRPVTIIVPFPAGGATDITARLVAEGLAKKWGQGVVVENRPGAGGNLGSEYVARAAPDGYTLVLGV
TGSHGINTSLYKNMRYDPRKDFEPITQATLYPNAIVVNNDVPAKNLPELIALLKKGVVQYSYGSDGNGTASHLGMELLKN
QGNFALTHIPYRGSAPMVTDLLGGQIQVGITGLPAVQAYAKSGKLRIIGLTTGERFASAPDYSTVAEQGFPGFSAPPWSG
FFAPKGTPKALVEKISADMREVMTDPAAKEKMIAAGSEFTPSTPEQFAAFVDKEIAKWAEAVKISGARVD
>AHV93585.1 translation elongation factor Tu [Bordetella holmesii ATCC 51541]
MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLSTKFGGEAKGYDQIDAAPEEKARGITINTAHVEYETEARHYAHV
DCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIIVFLNKADMVDDAELLELVEMEVRELLSK
YDFPGDDTPIVKGSAKLALEGDKGELGEQAILALAAALDSYIPTPERAIDGAFLMPVEDVFSISGRGTVVTGRIERGVVK
VGEEIEIVGIKPTVKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVLAKPGSINPHTDFTAEVYILSKEEGG
RHTPFFNGYRPQFYFRTTDVTGTIDLPQDKEMVLPGDNVSMTVKLLAPIAMEEGLRFAIREGGRTVGAGVVAKILK
>AHV93586.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MTVRRMDWRDLQGGVLRSQEGPGFYLLMVAGGGADLYAGDTVLAQRTSMMGHAVTWSADVSYELVRYSRRGDVERAVQVH
LTPEWLASRLAPENPLRKALPLQPYRWPLSRGGLARLQQLLHPPRKHPDLLPLYMEARVLELLRETGGLLCNASDEGSTL
SRRKLLRMVQVKELLESGCADEWSLAQIAARHHLSVNTLQRHFRAAWKCAVDEFRRDARLRRARAALEREGVRVARAAEI
AGYRSPANFATAFRRAYGMAPRQALGTRTV
>AHV93587.1 low-affinity inorganic phosphate transporter 1 [Bordetella holmesii ATCC 51541]
MLDLFSGLDLWVGLSLVLALAFVLAFEFINGFHDTANAVATVIYTKAMPPHLAVVLSGSFNFLGVLLGGVGVAYAIVYLL
PVELLINVDTGRGLVMVYAMLAAAIAWNLGTWYFGIPASSSHTLIGSILGVGLANALLTDLPLSAGVNWGKAIDIGLSLL
VSPIAGFVIAGGVLLLLKRFFPLSKMHKTPEQRRALDAKKHPPFWNRLVLVLSAMGVSFVHGSNDGQKGIGLIMLVLIGI
VPAKFVLDVNATTYQIDRTRDAASHLSAFYERNAPTLGDYLALSRGGKGSDLPANFRCDPQLTTATIDALQTRLQGVHNY
NELAPDSRVAVRRYLLCLDDTAKKVLAQQNLDTRERTDLQRLRADLTATTEYAPLWVIVAVALALGIGTMVGWRRVVHTV
GEKIGKQGMTYAQGMSAQLTAVGAIGLANVFSLPVSTTHVLSSDVAGTMVANRSGLHGSTVRNILLAWVLTLPTSMLLAA
GLYWLDLKIIG
>AHV93588.1 putative type IV pilus assembly protein [Bordetella holmesii ATCC 51541]
MVLFRTGCALLACLIMSPASGAHADALSQSVQQWLQQEIQTHAGAEAEPEAGSDAVKSSAPLELRAVYGVGSRLTAEFFA
SGQVFVARSDAPRLQGSTTMDETSVALLGVRGPCAKLKQASGALIQACILPREASHE
>AHV93589.1 radical SAM superfamily protein [Bordetella holmesii ATCC 51541]
MRFSDFDLRLAALGALPVHRARLTRVWLKGQPLDTGTRRRSSEHFLPLALREAVPALTAQLDGLARVHSEHAGHDGSRLL
VELADGQMIESVLLPRDGLCVSTQVGCAVGCRFCMTGKSGLIRQVASMEILAQVVLARRLRPVKKVVFMGMGEPAHNLDN
VLEAIDLLGTEGDIGHKNIVFSTVGDRRVFDALPQQRIKPALALSLHTTKADLRQQLLPRAPKISPQELVDLGEHYARAT
GYPIQYQWTLLKGVNDGDDEFDAIVTLLKGKYGVLNVIPFNSLEGDDFQRPDGARTRHIVGYLHSRGVLTKVRNSAGQDV
DAGCGQLRARAEAGARVIELPRRRQATLSIEQATPP
>AHV93590.1 leucine--tRNA ligase [Bordetella holmesii ATCC 51541]
MLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAAIKSKVPPAKWTYDNIAYMKKQMKAMGLAI
DWSREMCACDPAYYKWNQWLFLKMLEKGIAYRKTQVVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPGYYLRITDYA
DELLDQVKNHLPGWPERVRIMQENWIGKSAGVRLAFPHDIKDEDGQPIQEGKLFVFTTRADTLMGVTFCAVAPEHPLATY
AARNNPALASFIEQCKLGGTTEAEIATREKEGMRTGLTVTHPLSGQPVEVWVGNYVLMSYGDGAVMGVPAHDERDFAFAR
KYGLTIRQVIALEGKTYSEQAWQEWYGDKQSGRAINSGAYDGLSSAEAIDAIAGDLAAKGLGEKQTTYRLRDWGISRQRY
WGTPIPIIHCPDCGPVPVPEQDLPVVLPDDLIPDGSSNPLAKNEAFLSCSCPSCGKPARRETDTMDTFVDSSWYFMRYTS
PGNDQAMVDDRNDYWMPMDQYIGGIEHAVLHLLYARFWTKVMRDLGMLKFDEPFTRLLCQGMVLNHIYSRRTPQGGIEYF
WPEEVENIYDAKGAITGARLKSDGSEITYGGVGTMSKSKNNGVDPQSLIDTLGADTARLFVTFASPPEQTLEWSDSGVEG
ANRFLRRLWSLGYEHREAVARGLAQGTDWQDAPAVVKDLRREMYGLLKQAEYDYQRIQYNTVVSACMKMLNALDNAKLPE
GHASDAVRAEGLGLLLRVLYPVVPHVTWQLWRDLGFAQEMGDLLDAAWPHVDEGALVAEEIELMLQVNGKLRGAIRVTAK
AAKEDIEQIALAQEEVTRFLEGRPPKRVIVVPGKLVNVVG
>AHV93591.1 nitroreductase family protein [Bordetella holmesii ATCC 51541]
MTDALTQPALHALNTRRSVKFLRGPAPKPDEQALILQAAMSAPDHGALRPWRFVRIQGDAIARFADVALDAVKRSGDARM
TPEKEKSVRAWMADVPLFLALAAKIDHNSKVCEQEQVLAAGAAVMNILNATHMLGYGAFWSAGLGTYVEEVQEILGLDPL
DYRFLGYLAIGTPACAVPQHERPDFHDFLSDWTGAEPAAGSQAPEV
>AHV93592.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRSYGYRDQEYFFLKIRSA
FPGIPR
>AHV93593.1 electron transfer flavodomain protein [Bordetella holmesii ATCC 51541]
MTTLVIAEHDNAQLKGATLNTIAAAAKLGGDVHVLVAGSNARAVAEQAAAAAGVSKVLLADAPQLADGLAENLVAQVLAV
ASAYSHILFPATASGKNVAPRVAAKLDVAQISDIIGVESADTFQRPIYAGNAIATVQSGDAVKVITVRTTGFDAVAASGG
SAAIEDAAAVADSGLSSFVGREVAKSDRPELAGARVVVSGGRGLGSAENFKILDPLADKLGAALGASRAAVDAGYAPNDW
QVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFGVADYGLVGDLFQIVPELAGAL
>AHV93594.1 bacterial flagellin family protein [Bordetella holmesii ATCC 51541]
MAAVIYTNYLSLVATNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIVNRFTANVQGLTQAARNANDGISVAQTTEG
ALNEINNNLQRIRELTVQATTGTNSPSDLKSIQDEIGQRLEEIDRVSGQTQFNGVKVLAADKKMSIQVGSNDGETITIDL
EEITSSTLGLGTFNVDGKASVANKAATETDLISRGTNIGTTDGVTKYAVSTDNTKATLSDVYSKMTTGSTATVDGTTYAY
NATSGNFTYGKTIATGDTAAADFAAEITPATGSQKATVTIGGSSQEVLIKSDGKIQAADDGATLYLDGTDNLTKTRADPN
DKAATTESLAASLYSGKNGGGTVKFENGATYTATGDESPITATSLSYSKANMTPRWLPQAVKLPSVPTPTQSARAPARPS
RSAPLPTFILTLPMVR
>AHV93595.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93596.1 cytochrome c oxidase caa3 assembly factor family protein [Bordetella holmesii ATCC 51541]
MDVLAWFIPWEFSPTLVLAFVASTVLFVRGRKVHHVTLARQLFFWSGLVLLYLSLHTRLDYYAERLFFIHRAQHLVLHHL
GPLLVMASYPGSVMRAGLPLAWRHSLRQALATGPGRMWVAVLTQPFFVPFLFVFLVLVWLLPTVQFYSMLDWRLYRLMNW
SVVISGLMYWNLILDRRPCPPAAMSPGARVLSPILTMVPQMVAGAVIAFTETDIYPLFELCGRAMAISAQTDQTIGGLTM
WIPAALVEVIGLLVALGTLMRLSGKGRLRRVDRLARQVPGQLRSR
>AHV93597.1 putative beta-lactamase [Bordetella holmesii ATCC 51541]
MAHGRTGDKGNRSNISVIAYDPALYDSLVDQVTEEAVRRVFAHRRPGAIRRYLLPQLAAMNFVIDDVLDGGVNDSLNLDS
HGKSLAGYLLDLEIDLPGAAPG
>AHV93598.1 penicillin-binding, 1A family protein [Bordetella holmesii ATCC 51541]
MFLRFLIKTGIFFGGLALCGLVLGGMALALAWPNLPDLHAMTDYRPRVPLRVYTADKVMIGEFGEERRNVLRFNEIPDVM
KSAVLAAEDDRFYQHGGIDWTGVVRAGLTNLINMSKTQGASTITMQVARNFYLSSEKTYSRKFYELLLTFKIESELTKDQ
ILELYMNQIYLGHRAYGFAAASRTYFGKPLSQVTPAEAAMLAGIPKAPSRFNPISNRPRAELRQRYVLGRMYSLGYLTEP
EYKAALAQPIIMKSAEGTPAGGYAVHGEYVAELARQLVYGVYQDDAYSRGINVYTTVSSKDQEAAYRAVREGVLEYTRRA
PYPGPEDQLELPAGVEKDAQALDDFLDGVFDKYSDSGDLMTAVVLSASPNEIKLARSSREIISITDKKALGVVARALNDK
AKPEQRLQRGSVVYIHKYGDDGNWEVINMPAVQAAFVALSPQDGAIRAMVGGFDFYRGNFNRVTQAWRQPGSNIKPFIYA
ASLERGLTPGTQISDQPFELSAAQTGSKAWHPKNYGNQYEPMLTMRQGLYKSKNMVSIRILQAIGPQYAQDYLTRFGFDK
ARQPAVLPLALGAGSVTPLQLAGAYSVFANGGYRVTPYLINQVTDSSGKVLMQARPVIAGDEAARAIDPRTAWVMDDMLR
GVATSGTAARARATLKRNDLAGKTGTTNESVDAWFSGYTPNLVATAWLGFDQPKSLGSRETGGGVAMPIWLDYMQEALKG
TPEGKQRPKPDGLLAENGDFYFAEFPPGQAVARLGLTQPGEDALGDFLNGLGDNQNVRTAPGFGTNSQKPWSQNIQF
>AHV93599.1 rod shape-determining protein MreC [Bordetella holmesii ATCC 51541]
MQRQGTPPLFRRGPPAEVRLAVFVALALALIVVDSQLRLLEPVRRTVSMVLYPFQRAVMAPRDLVQQVDEWINAANLIRS
ENEALQRQRIELSQVATHAVQLAAENAQLRRLLGVTDTVGQPASVVEVLYEPPNAFHQRLVFNKGSKAGIAPGMPVIDEG
GVVGQIVRVTPMTAEAAMVTDERISIPVQVLRNGLRLVAFGGNSPGVMEVRYLAANADIKLGDTIVTSGVGGLFPAGLPV
AKVTSVERDTASGFARALCEPLAHPERYRHFLVLQVDVARAEANREEADLGGPQ
>AHV93600.1 periplasmic binding domain protein [Bordetella holmesii ATCC 51541]
MTMHACAKAAGLCLGALLVGQAMAADKPPVKIGVLTDMSGTYAAMGGAGSVAAAQLAIDDCLAAECKGMKIELVSADNQN
KADVGAARAREWFDRDGVTAIADLTNSAVALAVQGIAREKNKVVMFSGPATTALTNKECSPVGFHWMFDTYSQSAGGAKA
TVKAGGKSWYFVTVDYAFGHSLEADTAKAVKSLGGTVAGSVRHPLNAPDFASYLLQAQSSKAQVVALANGGQDTVNAVKQ
AREFGIVDGGQRLVSLLIFLSDLRALGLENAQGLAYVDGFYWDYDDASRQWSARFEKAFRGLKPTMTQAGVYSSVLHYLR
AVAAAGSTDGKVVAAKMRELPIKDPIMRNASIRPDGRVIHDMYLYEVKKPADSKGGWDYSKLVATIPAAEAFQPLADSSC
PLVKH
>AHV93601.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MFAAGFATFSLLYCVQPLMPLFTHNFQISPVQSSLSLSLSTGMLALAIFAVGLWSQALPRKGLMAASLIASAILGLMAVS
LIASAILGTLAAFAPDWNSLLVLRALQGVAMGGVPAVAMAYLAEEVEPGTLGFAMGLYISGSAFGGLTGRVITGLVSDFF
GWRAALGTLGLLALLAAVLFTWLLPASRRFVATRGNGWREARRGLAAHLRNGPLVSLFLLGGLLMGSFVTVYNYVGFRLL
QPPFSLSQAFIGSIFVVYLVGIFASTFFGRLADRHGRGIMLVMGTVLTLSGLLLTLSNNLAVLVIGIVVFTFGFFASHAV
ASGWVGQMARGYKAQAASLYLLVYYLGSSVLGSVGGKSWALAGWAGVAELTGAFLLVALGLSATLALRSARQTHRALDAG
REPQL
>AHV93602.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MKAAKFAETLSIFVDVAQAQSFSEVARRGGLVVSSVARQIDALESELQVPLFVRSTRALVPTEAGEVLYERAVKILHDMT
EARSEVISLEQNVQGLLRVSCLPAFARRYVVPILGRLGERHPQLQVELALTERIVDPVVERMDVVVRVGQQPDSSLIGQR
IGSHRYLMCAAPSYLERYGTPRRLSELARHRLIDRRHSTSVRGWREIGDGAWARQARFVLECDDCDARRQAALDGLGIAL
MPNWSAGPEIGRGNLVQIGLQDCTPPKTAASICCAPCPGRAPG
>AHV93603.1 hypothetical protein D560_3078 [Bordetella holmesii ATCC 51541]
MAMASAAVLAQELQRQPVADALRAHDARLRPIIEQLQARSRKLAPMYVPSAGWSFRLRNTAMRYLPQLLLKRYFLSGLKS
EADAARALA
>AHV93604.1 3-isopropylmalate dehydrogenase [Bordetella holmesii ATCC 51541]
MTQKIAVLPGDGIGPEIVEQAVRVLRALDLPLELNQAKVGGAAFDEFEHPLPPATLELAKSSRAVLFGAVGDWKYDSLPR
EFRPEQAILGLRKALGLFANLRPAILYPELASASSLKPEIVAGLDIVIIRELTGDIYFGTPRGVRSAVDGQFTGEREGYD
TMRYAESEVRRIARVGFETARKRNKKLCSVDKANVLETSQFWRDVVIETARDYPDVELSHMYVDNAAMQLVRNPRQFDVI
VTGNLFGDILSDEAAMLTGSIGMLPSASLNASGQGLYEPSHGSAPDIAGKGVANPLATILSAAMLLRYSLEQAGQADRIE
AAVRKVLAEGLRTADIHEPGTTKVSTAQMGDAVLKALG
>AHV93605.1 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Bordetella holmesii ATCC 51541]
MKPVFLLTSLLLAGCLHTPYERPQVQTPAHWQQGQGAAAVAPAGGQWWRNFQDPVLDTLVEQALARNNDLTVAALTVRRA
RLQAGLAQSDLYPTVSGTGSFNRSRNLDGGRASVRTTNVELAASWELDLWGRLARARDAAQWQAVATEEDRQAAALALAG
TTAELYWQTAYLNQRLASSRESIAYARRTLELVQAQYAAGGTSGLEVAEARQTLASQQATHTELLQQRVEAINGLTILFD
GPPDRIVADPQRLPQGPLPGVDPGLPAQLLARRPDLRAAEARLRAAVAATDATRASYYPPLTLTGALGSASDSLGNLLAN
PVAALGAGLALPFLNWNQMRLNIRISETDYEILVAQFRQALYQAMSDVENALSARGQLAQRARLLQDSLEAAREVERLYE
TRWRAGAVALRIWLDAQEKRRAAEVAVDENRLQQLRNQVQVYQALGGDAIVGQYGP
>AHV93606.1 hypothetical protein D560_0523 [Bordetella holmesii ATCC 51541]
MRNRACASTDADKRRSSRRFFSGQRLERRIQRYPLIEDEAGPS
>AHV93607.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MRAAVLGAGSWGTALAAAAARRHPTLLWARDPAQVQHLQTRRENTRYLPDVALPATLAFSAELDRALAFLGQDPDQALII
LGVPVAGMSGIMTELAQRLPALGMGRTPIVWTCKGFETGTARLPHEIARQAAAGMPGLACSVLSGPSFAREVAQGLPVAL
TVASDDARVTRAATAALHGGAVRVYASQDVVGVEVGGALKNVIAVACGISDGLALGTNARAALITRGLAEMARFGAALGA
RAETFAGLTGLGDLVLTATGELSRNRRVGLDIGAGRKLADILASGVTAEGVRCARAALDRARSLDVELPITQAVCAVLFD
GVAPMTAVSALLAREARPESPDPSHKEPSP
>AHV93608.1 phospholipase D family protein [Bordetella holmesii ATCC 51541]
MRRFARFCCVVGVLWLTGCATVPGPQALQERRQQAALSAASAQSSYLKGRRVVARVTDTGEQADFLGRHLAVEGAIAGTA
LVAGNHVRLLADGRATYEAMLRAISRARAYIHMESYIFDEGEAGEAFAEALIAARQRGVPVAVMVDAVGTLDTPESLFDR
LRAAGVQVLVFNPVNPGHSRKGWSPNQRNHRKLLVVDGEVGFLGGINVSDVYASGSSLGQGEPGQAPWRDTHLEIRGPAV
TQIEGVLLAG
>AHV93609.1 hypothetical protein D560_2348 [Bordetella holmesii ATCC 51541]
MSRSSFDRAGLSLMLATVFVWAGSWIAMKLVVPYIGPYNFVVVRYLSGALVLFVGAILTARPLAMPAWRLTVMVGLLQTA
GFQGCVQTALVTGGVGKVALMAYTMPFWVILLAWLILKERPSRLHWAGIALAACGLVCFAQPWNGMGSDFLPMALGVGSG
FCWGMGTVLS
>AHV93610.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MSTVYIALIARITRTSVIEVMGEDYIRTARAKGLGETAVLLGHALRNAAVPIATVVGVGVAMLISGVVVTESVFNIPCLG
RLVVEAVLARDYPVIQGLTLFFAFVYVFINLLVDFAYTVFDPRIRY
>AHV93611.1 hypothetical protein D560_1336 [Bordetella holmesii ATCC 51541]
MARLLDDGHAYAGMRQAAHDTQRRFFNTALNHRRLAELLASL
>AHV93612.1 tonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein [Bordetella holmesii ATCC 51541]
MEVRHPLALWSLLAAAPVMADTAAGAAAPVPAWQLETIVVEANAEAESPSTDVRSASQISRDNVLDARDLVRHIPGITVS
EGGRAGTNGFAIRGVDGNRVAVTVDGVAQAEYFLPEVYLGYGYLNGNRNSVELEHMKQVTLHKGADSYSSGSGGIGGSVQ
FVTKDINDFVDPGKTAGVYSKLAYASRSRQWLGVAGAGTRLGDLGTSFFLQYTRRGGHEIMHHGGGADIAGRSRGRPDPV
DATTQAWLSKLDVCVVRGHCVQLSHDERAERRFTDEKSYGAFGQTRQAWDSSPYRRQALVYRWIPSDGPLESLSAGLHLQ
NVLQRALTENRDIKDGFLDQRYDRRTTQRDRQWRLEAAARVWDTSWGRHRFSGELAWTQRRLNNDNTDRLFFKNSAGGQS
SYSIVDPVRVRSLSLKLKDSFAFGPLWHGELGWRVDRYAHQPTPGVAPSYGLDAVGRRRFSAGSWFGNLSHEVTSHLRLS
YAVSQGFRAPSAQELYFRFRRGFNYFLPNPGLKAERALNQELTLTAHGDVGNLAVALFQTRYRDFIEERHTTREVPNPFY
EPFNPWGIPPVQIEDYFQQQNIDRAKVWGVELKGLLDAHTAFGAPKGWGMDVRATLTRGRTSLGDGLRALQPLQVVAGLF
YEAASWGLRADLVHHGAKRERDTLRTTYGARGAVREPSKYLSQAVYLVDLSAYTRLGRHMTLSAGIYNLFDRKYFRWDTL
RSLASFGTTGRIDPAGEGLNRYTAPGRNVAVNLEIRY
>AHV93613.1 ompA family protein [Bordetella holmesii ATCC 51541]
MNKPSKFALALAFAAVTASGVASAQTVDNWRNPFGNVWKNGTNELCWRDAFWTPATGIPGCDGVPVAQKEKPAPMAAKVV
FNADTFFDFDKSVLKPEGRQLLDQVAQQAKAIDLETIIAVGHTDSIGTEAYNLKLSDRRAASVKAYLVSKGIDPNRIYTE
GKGEAQPIATNKTAEGRARNRRVEIEIVGSRRK
>AHV93614.1 putative excinuclease ABC subunit A [Bordetella holmesii ATCC 51541]
MKAFFDRSYYDVLERLAGRPYGLAISAGSDGRGACSQIERICTGWRLKQICPALIARNGAQTPEAILAAKDVEPQARASA
EELGGLLAATLLLGANP
>AHV93615.1 formate dehydrogenase, alpha subunit [Bordetella holmesii ATCC 51541]
MHSDVVIVMGANPSSGHPVFASRLKKRLRQGAKLIVIDPRRIELVDSPHIKADYHLQVRPGTNVALLTALAHVIVTEGLV
AESFVAERCETAAFEQWKTFVSRPEHAPEATQEITGVPAQIVRGAARLYARGGNAAIYYGLGVTEHSQGSTTVMAIANLA
MATGNIGRDGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDEDARQLFENDWGVTLQPEPGLRIPNMFEAALAGSFLG
LYCQGEDIVQSDPNTQHVAAALSAMECIVVQDLFLNETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVMEPRNGLAD
WEITMALSNALGYPMHYGHPREIMAEIARLTPSFAGVSYEKLDQAGSLQWPCNADSPLGTPIMHVDVFVRGKGRFMITRY
VATDERSTRRFPLLLTTGRILSQYNVGAQTRRTENVRWHAQDLLEIHPQDAEDRGVREGDWVGIQSRAGETVLRATLTDR
VQPGVVYTTFHFPESGANVVTTDNSDWATNFPEYKVTAVQVTRVSQPSEWQRQWTRFTETQQRLLSDRDTAVLAGK
>AHV93616.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MAGPLQGVRVVDMTSVAMGPYATQILGDMGAEVIKVEAPEGDVFRTSAPAAHAGMGPAYLNLNRNKASVTLDAKQPADRD
RLFALIAEADVFVSNVRTAALARLGLDAATQCARHPRLIHCSAVGFGQDGPYASHPAFDDIIQAMNGMADLQGRNSGAPA
YVNTIMADKVAGLTLAYAIPMALYERERSGQGQAIEVPMFETMVSFTLVEHMSGHTFVPARGPMGYSRVLSPQRRPYRTR
DGYLALLPYTDAQWGRFFALAQRPDLAADPRYTDAATRARHFDALYQDLADIVASRDTAQWLALLANADIPHSRVNSPEA
LFDDPHLRATGFFEQVEHPTEGRLVTTAVPYGFRARLAGCDAWHRARMPIAIFCSSLPGGPGRRPRP
>AHV93617.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MNKVLHPTKLMAAAALAFGVLASPLAHASKDVTFAVSIALETLDPYNTNSTLNQAVGKAYYEGLLEFDKDLKIQKVLATD
YSVSDDGLVYTFKLRPGVKFHDGTDFNAEAVKINFERPANPDNRLSRYIQFSVVDKVEAVDPLTVKITLKKPFSAFPNAL
AHPAAMMISPAALAKYGKEIGFHPVGTGSFEFVEWKPAEYLKVKKFDGYWNKGKPKVDSITFRTVTDNNTRAAVVQTGEA
QFAFPVPFEQAAILAKNDKLDVVDHKNSIMARYMSMNTQVKPFNDVRVRQAINYAINKDALAKVAFNGYATKVDGVVPAG
VDYAHKNGAWPYDPAKARQLLKEAGYENGFETTLWSAYNDGTSVKVVQFLQQQLAQVGIKTSVEVLESGQRVQRVQQVQK
PEDAKVRLYYAGWSSSTGEADWGLRPLLTTGAFPPVLNNVSYYSNKSVDDGVQEALATTDRAKKTEIYSKVQDTIWNDAP
WAFLVTQNNVYVKSKNLSGVYVEPDTSFWFGDIDLKQ
>AHV93618.1 ribosomal protein L22 [Bordetella holmesii ATCC 51541]
METTAIIRGVHISAQKTRLVADLIRGKSVAQALNILNFSPKKAAGILKKAVESAIANAEHNEGADIDELKVTTIYVDKAQ
SMKRFSARAKGRGNRIEKQTCHITVKVGA
>AHV93619.1 high-affinity nickel-transport family protein [Bordetella holmesii ATCC 51541]
MLTAALLLTGASAWAQSHPFAVPESAPPSTGWLAQWFAQISVWQSHFYRQLTAAVRAWQHEGSWVLVGLSFAYGVFHALG
PGHGKAVISAFVLANHQSARNGAILALMSALLQAVVAILMVAILAGLFNVTAHVMNAGTQWLELASHGLIVVLGAWLVWA
KALRPWFLAEQGGSRHLHHATCGCGHVPPLALMAGRLDWRRAWTAIAAVGLRPCSGALIVLVFALSQGIFSAGVVAAMAM
GLGTGLTVAVLAMIAVWSRDALTASSRLSPPLVARLRYAVEALAALAVLLLGILLLGGQIASGG
>AHV93620.1 na+/Pi-cotransporter family protein [Bordetella holmesii ATCC 51541]
MSGLLTMLDFAGYVALLLWGVHMVQTGVQRPFGAALSAALGRALGTRVRAFVAGLVITPALQSSTATGLMITGFAAAGVV
GLVPALAAMLGANVGTTLIVQLLSFDLTSLAPILTLIGVWMFRRYPPGRTRDLGRVFIGLGLLLLALHALVELFHPLEQA
PLLSTILQSLASQPVLAVLRAAAITWAAHSSVAVVVLIMSLVSHQIVSIDVAMALVLGANLGTAVNPMIEGVTGDDPAAR
RLPLGNLLTRVAGVIIGLILLPYVAPLMATLEADPSRMVANFHTVFNVVVAAAFLPLLTPYGALLTRWLPKRSDPNDPAR
PQYLDEWAHDVPAAALGNARREALRMTDMLQTLLLYARAGFKRDNRHRMVQARQLDSALDKLETAITTYIATLDQDDLTQ
EDRQQIDSILAFISNVGHASDIAFHGLLGHIARLRKQGLQLSAEQRAQIDDTLAALVANQRQAAALFVNDDLRQARVLAG
EKSRFRAMEAEAAEVHLQKIKNGEVDAAEAGALYLDILRDLKGINSHLVGAAAYPLLARHGELLPSRLRDASAD
>AHV93621.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV93622.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93623.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MKLADTVATHYRELVDFLSRRTGSRDSAQDCAQETWLKLAGMQAVSAPISNVRAYVFQVAANLAIDMQRRQTAENRNIER
YAQFQLPGATSPDTAEIAALRQVIARLEAAILAQPLRTRQIFLLHKIDGQSYADIAQALGVSLKTIEKHMTRVLLACRLA
MAQA
>AHV93624.1 cobalt transport family protein [Bordetella holmesii ATCC 51541]
MMEPLYTPGNTLLHRLPAGVKLMLLMGAGVGLFALQDARYLGLACLVSVLLVAACRPGLAKLWRQVRGLLIILLAVAVFT
AWSQDLQAALAVVTRSAALIALAMAVTLTTPVAALLNVIEQGVRPFSRWVDPSRVSLAFALCLRFVPEIWRNYQEIREAQ
AARGLNHHPLALLVPLIVRTLKRAEEVAQAIDARS
>AHV93625.1 copper resistance D family protein [Bordetella holmesii ATCC 51541]
MVYNVVKLLHVLAVIFWLGGMAYTLFFVRPALACLPPPLRLQTLRGLLARFLGAVLAAILIALASGAWMLADVASQVRAT
GGSLNIPPAWHLMAGLGVVMAAIYFYVRYALFARLNAAVERADWPAGAQVAATLRTWVGVNLVLGVLIVAAVLL
>AHV93626.1 50S ribosomal protein L3 [Bordetella holmesii ATCC 51541]
MSNTTPTPAAHRLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVTYGNRRASRVTKAEAGHFA
KAGAEAGSNLKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKGFAGTIKRHHFGSQRASHGNSRSHRVPGSI
GQAQDPGRIFPGKRMAGHLGDATRTVQNLDVVRVDAERGLLLVKGAVSGHAGGDVIVRPAIKAPAKKGA
>AHV93627.1 formamidopyrimidine-DNA glycosylase [Bordetella holmesii ATCC 51541]
MPELPEVETTRRGIDAIIKGQALRRLVVREPRMRWPIPADLPALLADRPVLATDRRGKYLLLRFEHGVQIIHLGMSGSLR
RVAIDEAPRKHDHVDWVFDHAIFRLHDPRRFGAVLWHPAETGPVETHPLLIGLGIEPFDLRFNGKWLHDQFRGKRVAIKQ
ALLAGHAVVGVGNIYASESLFRAGIDPRLPAGKLSGPRCERLAHAVRATLTDALASGGSTLRDYVGASGEPGAYFAIHAA
VYERAGQPCRVCGTPIRRIVQGQRATYFCPHCQKR
>AHV93628.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQVRIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRTDAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHM
>AHV93629.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93630.1 AFG1-like ATPase family protein [Bordetella holmesii ATCC 51541]
MNAREYYENALAERGYKPDEAQLRAVDRLQKYYDDWVRFKAMRSNALKRLLSRPDVPRGVYLWGGVGRGKSFLMDAFYAT
VPVVRKTRLHFHEFMRGVHRELENVKGMQDPLDEVARRVAKRYRLICFDEFHVSDVADAMILYRLLLKLFEYGTSFVMTS
NYEPSTLYPDGLHRDRILPAIELIQSRMDILNVDSGIDYRRRSLEQVQLYHHPLDSAARQALEEAFSKLADTAAQDPVLR
IEHREIRAQALAGSVVWFDFATLCGGPRSQNDYLELANRFHAVILSEVPRMGPRQASEARRFTWLIDVFYDHKVKLIMSA
ECPPEELYTEGALSNEFHRTVSRILEMQSREYIESERRQIGTL
>AHV93631.1 sugar isomerase, KpsF/GutQ family protein [Bordetella holmesii ATCC 51541]
MTNRVPTSADAQASARRSLHIEAQAILDLAARLDDSLTRAVDMLLACQGRVVVSGLGKTGHIARKIAATLASTGTPAFFM
HAAEAAHGDLGMLTGQDVLVALSYSGSGQELLTILPVTRRLGAEVIAITGNPASELAQLADVHLDASVAHEACPLNLAPT
ASTTASLALGDALAVACLEARGFGPDDFARSHPGGALGRRLLTHVRDVMRQGQALPTVTVSEPLSRALEEMSAKGMGMTA
VVDDNFHPVGIFTDGDLRRLIERKGDLRGLTVAEGMTRNPRNVDPDALAVEAARIMDEKRLSQMLVINDDGVLIGALHMH
DLMAAKVV
>AHV93632.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93633.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MTVGVVATYTPQQGFLGNLWVAAVVCGLVNLPSISIWVSFGMALRRILHRPGAVRIFNLSMALLLVASLYPIALDLAAR
>AHV93634.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MTLRYTAALAASLTLSVFAAAAQAAGYPERPIEWVVPYPAGGGSDIVARTLSEPMSRELKQTLIISNKPGAATAIGADYA
ARAKPDGYVMLTGDTATLAANPSLYPKLAYQPQRDFDAVGLMTRFSMILVVNPSVPVKTYDEFLAWAKTQKDGVPYATPG
SGSPHHLATESLRARTGLNLVHVPYRGAAPAVQDVVGGQVPMMFVDSATGMQYIASGKLRPIAVASDKRPAGFPQVPTLI
ESGLDNFEAYAWQGLVVPKGTPPEVVTALNQALQKALAQPSVQERFSAMGLETLPGTPHAMSAYAADEQRKWAKVIKEAD
IRVD
>AHV93635.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MIAVQNLSKVYASGHQALKNINLEIRRGEIFALLGPNGAGKTTLISIICGIVNASSGRVLADGHDNVRDYRAARQAIGLV
PQELTTDAFETVWNTVSFSRGLFGKPANAALVERILRDLSLWDKKDSRIMALSGGMKRRVMIAKALSHEPRILFLDEPTA
GVDVELRRGMWDMVRRLREQGVTIILTTHYIEEAQEMADRVGVIRKGEIILVEQTHALMRKLGKKQLVFALTAPLVAVPP
TLARYDLSLSEGGRVLTYTYDTQGEINPVQPLLRELDALSIGFNDLQSSESTLEEIFVSLVSAQS
>AHV93636.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MQQARAGLGAPSGLPPPQTSSGRPLVGVLLLILSLWTLSCLDASGKWVMTAGVPLLMLCWVRYVVHLVVVTALVVPRRGR
RILRARRPRDQILRGAAMFCATLMFFTTLRYLHQAEATAINFLAPMIVLSVAPWILREPPRLSRWVASAVAFVGVLIVIR
PGGGLDPVGVIFGLLTAFCFAAQFILTRRVACDDAYTSLIWSGLVGTICLTAALPFILPAALPVLAGLSPMNWLILLSTG
LSGALGHLLQIAAYRNASASTLAPFVYMQIVRATTMGWLLWGHFPDALTWLGIAIICGSGIVIGMLEWRRAATVRR
>AHV93637.1 inner membrane transport permease yhhJ [Bordetella holmesii ATCC 51541]
MGRHIANIYRLGIKELWSLARDPMMLILIGVSFTIMIYTAATAVPESLHNAPIAVVDEDSSPMSQRIVSAFYPPHFTPPA
HVSAAEADAGMDRGLYTFWINIPPNFQRDVLAGRPAEIQLNIDATRMSQAFTGSGYIQQIISDEVNAFVKRYRKADTPPV
DLAIRMRFNPNLTQAWFGAMMEIINNVTMLSIILTGAALIREREHGTIEHLLVMPVTPAEIMLGKVWSMGLVVLVAAGLS
LTFVVRGALHIPIEGSIVLFLVGAALHLFATTSMGIFLATLARSMPQFGMLLVLVLLPLQMLSGGNTPRESMPQFVQDIM
LAAPTTHFVELGQAILYRGAGLNVVWVPFLALLIIGSVLFAFSLGRFRKTLSQLA
>AHV93638.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKIRTLLCVALGATAFASQAMADYPDRPIRLIVPFAAGGTTDIVARVVAESLGRELGQPVVVENKGGGGGAIGAEALARS
SADGYTLGMATVSTMATNPATNPKTPYNPLKDFTPIINLVNVPNVLTVNPKVPAKNLEEFVALLKANPGKYSYASAGTGG
ISHLDGELFKSLTGTPEFIHVPYRGSGPGLNDTLAGQVSAQFDNLPSSMPHIQSGKLRALAVASTKRVPGLDNVPTFAEA
GMPAMNNMAWYGLVAPAGVPPAVVQKVHDAAARALKDPRTSQRLIEGGSQIDGGTPEAYAALIKRELELRQKIAREQKIQ
LTE
>AHV93639.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein [Bordetella holmesii ATCC 51541]
MVYDADGLSLSLPRDTRLMAVAGLRAMLGALADAWYGEPSASLNVLAVTGTNGKTSCVHWLAQALTGLGKPCGTIGTLGG
VLPDGRSLGGSLTTPDVVTVHRWLAAMRDAGAQAVAMEASSIGLEQGRMDHVRLVVAGFTNLTRDHLDYHGTMQNYEAAK
ALLFNWPGLQAAVINADDPAGQRLLATLPAGLASGYSIESADAEIYVCDLQATAHGQVFTLRTAQGEAQVVTSLLGRHNV
SNLLLVAGMLLKLGWPVSAVTRQIAAAAAVDGRLQTVTALPLAAPLTSPLVVVDYAHTPDALARALSALRPVAQARGGAL
VCLFGCGGDRDPGKRPEMGRIASGLADRIIVSSDNPRSESPQAIIEQILAGVGQSGSVQTQVDRALAILQTIWASRPEDI
VLLAGKGHETYQEIAGRKVAFDDREWARAAFALSHVSGVSTDTRSIAAGQLFVALAGESFDGHDYLAQAAAAGACAAVVA
HAVADAALPQLVLGDTRQALGRLAKAWRSRFVLPAIAVTGSNGKTTTKEMISAVLADWQGQAHRLATAGNFNNDIGLPLT
LLRLRQEHRAAVFELGMNHPGEIALLAQMAQPSVALVNNAQREHQEFMHTVEAVARENGAVIAALPDDGVAVYPGDDRYT
AVWDELAGARRVLRFGLQPGLDVYAQDVRADLMGTLCRVVTPAGVAELALPVPGEHNLRNALAAIACALAAGAPLASAIR
ALQGFAAVKGRMQRKEMSDGTLLIDDTYNANPDSVRAAIEVLAQLPGPRALVLGDMGEVGDNGPAMHREVGGYARDHGID
ALFTLGDASRAAAAEFGATALACASVDEVVAALRGLGAASVLVKGSRFMRMERVVTAFSVNDNQTALGQEDKHAA
>AHV93640.1 ribosomal protein S21 [Bordetella holmesii ATCC 51541]
MPIVRLKENEPFEAALRRFKRTIEKNGLLTELRSREFYETPTAERKRKHAAAVKRHYKRIRSQQLPPRMY
>AHV93641.1 glycosyl hydrolase family 3 N terminal domain protein [Bordetella holmesii ATCC 51541]
MSKSKKHQKLAPGPVMVDVSGTRLTKQEKQRLRHPLVGGVILFARNFENRAQLTTLTRKIHEARGEPLLIAVDHEGGRVQ
RFREDGFTALPAMSALGQVWDRDPLLAMRLATEAGYVLAAELRACGVDMSFTPVLDLDYGVSKVIGNRALHRDPRVVAML
ARALIQGLALAGMAACGKHFPGHGFVEADSHHEIPVDKRSLTEILREDAAPYGWLGDGVLSSVMPAHVIYPKVDSQPAGF
SRRWVTEILRGKLAYDGVVFSDDLTMEGASVAGDILARAQAALGAGCDMVLVCNRPDLADELLGRLDVQLAAESVARIRR
LMPAFASPDWDGLQADSRYQHARRLQSQIISG
>AHV93642.1 putative transcriptional regulator [Bordetella holmesii ATCC 51541]
MLDHWLKPVAIDPKIMLDGVGTSRELAERLVQHIHAALEQPALMTTFRLLMAEGARLPDLIERWGRDSRAQQEALADLLE
QAAERGLCRPGVAAHSWLLLSPAVHALVAGMVSGRDEIAQDRQWREGHVQMLCALMARPA
>AHV93643.1 metallo-beta-lactamase superfamily protein [Bordetella holmesii ATCC 51541]
MVSHADLDHAGGVPAILAAMPVARYWSSFALPAWLAREQRLRERDGYALPAKLAMPLNLHECRAGLGWEMDGVRLRFLHP
GPERALWPKGNNARSCVLLIEGVAHRALLPGDVAAAQESAWVADLPAVDVVLAPHHGSASSSSPALVAAARASHVIAQAG
RFSRFGHPAAAAVRRWERAGATVWRTDRDGAVVVESGKSLQVSAWRQIRWDGFPLTEAGSPQQD
>AHV93644.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MEDTLTRLVLLDAPLLPGAVPLQRQLLQRLKTAILEGRLAPGTRLPASRNLAEALSISRNTVSIAYEHLAAEGYVQADRQ
GTRVATLTRQRRPAATTVSTEPVRVARRLERLVATPRGTGSYLALRPGQPALAHFPAAAWRRALDRAMRDGGGEALAYGE
PAGEPHLRAAIARYLGVARGVHCLPEQVIITEGTQEARALAVRLLADPGDIAWVEDPGYRGARTAFFAGDLDVRPKGVDN
DGLCVDARDWADAAPRLIYVTPSHQYPTGGVMPAARRLDLIAQARQHQAWIIEDDYDSEFRHHGEPIAAMQGMTPQAPVL
YIGSFSKTMFPSLRMGFAVLPECLVDATRIGIAELLRGGHRYEQLALADFIESGEFSRHLGRMRSLYRERQQALRAALTR
HLDIDHTVEGGQCGLHLTLRLPVEYPDHLIASAGPAHGMQPQALSAFALAAPQNGLVLGYGNTAADLFDPLSRRLARLIT
QARQT
>AHV93645.1 helix-turn-helix domain protein [Bordetella holmesii ATCC 51541]
MAGLPAGSRRRTPGLRREEVAQLSDISVTWYTWIEQGREVSVSPAVWSRIANVLQLARAERAYLFELAECADPQHPRDEP
AGAAGLLLQGCVDAVMAPAYVLDRAWRVLASNVAMRELFDHWPARDPEPNLLHYIFLDPAARSLVVDWEQRARRVVAEFR
ADAGAHLDEPDVRGLIDELERSSAVFAHWWTRHAVVDREGGLRDFNHPARGLLRYQQVTFRLATHPELKLVMLLRDTEND
PATPA
>AHV93646.1 diaminobutyrate acetyltransferase [Bordetella holmesii ATCC 51541]
MVADCPPLDLNSLYAYLLLCEHHGATCVLAESAGGSIDGFISAYQPPTRQDVLFVWQVAVHERARGQKLARAMLNALLRR
DALSQVRHLETTVGPDNHASRRTFAGLAAELGAHIAEQPYFDRQTFGGADHDDEMLLKIGPFAPVSN
>AHV93647.1 EAL domain protein [Bordetella holmesii ATCC 51541]
MGLDDLVRQCLLPGVVLFAICVLFFVIREHRLRRRLSRDSSTQALTPDSLRHRAQASMQRVGHGAIFLVKLIHHPALSAM
LAVEDNRALLAMVAARLEQQSDDFLVARYASDSFLIWAPAVQAQEIPEFAPHILEQLSWPYELRGQPLIVDFRVAAAAYP
DHGDSFDELERGVQISFMQMDVDGPHWNVFEPAMLERQRHYQGLEHDLRVALASSSMDQFDIHYQPVFDTRTGNIEGCEA
LLRWQHPVHGNVSPGIAIELAERTGLIVGLGAWVLDTACARAATWPAHWRLHVNVSVRQMYAEELPLQVAQTLANTRLAP
HRLVLEITESLFILQYERHVATLNGLRARGVQVALDDFGAGYSSLTHLRRLPIDWVKVDRGFIAELESDTVSQELVSALL
GMCRALGLMVVAEGIETEAQRDILSRLGCHFMQGFLLGRPAPAHQMRVLASSVS
>AHV93648.1 FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein [Bordetella holmesii ATCC 51541]
MTTRQIKLGAFLMQTGHHIAAWRHPGAQADASINIRHYVELAKRAEAACFDALFLADSVGVRNSELDSLARTARSDQFEP
LTLLSALAMVTERIGLIATVSTTYNEPYHVARKFASLDHISGGRSGWNLVTSSGLGEAQNFNLDEHLEHAIRYARAAEFH
DVVLGLWNSWEDDAFVRDTASGQYFAPEKVHPLNHRGEHFRMRGPLNVARSPQGRPIVVQAGASAAGRDLAARTAEVIFV
AHQTFDEAQSFYRDIKQRAGVYGRHPDEIKIMPGIFPVIGRTQQEAEEKFAQLQELIHPVVGVRLLSNMIGADLSGYPVD
GPLPDLPQTNGGKSRQQLLVDLARRDGLSIRDLYLRIAGARGHQQIVGTPERVADQLQQWFEEEGADGFNIMSPWLPGGL
DDFIELALPELRRRGLVRTHYQGRTLRDHLGLRRPAHPAAVARQARAAA
>AHV93649.1 crcB-like family protein [Bordetella holmesii ATCC 51541]
MLIPFHFLVIGVGAAIGAWLRWLLGLRFNDGHWPWGTLVANLGGGYLIGLVLGLVALHPEWPPWVRLALVTGFLGGVTTF
STFSAEVVQYLERGQIGPAAGYAAVSLAGSLCLTALGLATAHYLGR
>AHV93650.1 glycosyl transferase 2 family protein [Bordetella holmesii ATCC 51541]
MFGTTLLNICQKRVHKAVNMLQAWQVLHRHADDPLRLNRIGLFETSQRTKGGGLDCELARARAMLEWTGADARLHPADFS
GRVSDFERQQYALTLGRQNPEQANTWLKRSESALSLAMALAASDADAAQWHAAALPTPRRTNLKKANNLHAVVAAQHCLA
GQFGQARKHLTHLLTNAGGELATTNRPLTMDEFYARKTSIVPSEIQDHVLVSVIICARDAESYIDNTLLSVERQTYQNIE
IVAVDDGSTDNTFQHILAAASINARINPLRIDNCGTYAARNIALTRSRGSFITFLDADDVMLPRRIERQLGMVHAYRAMA
CTSRLLRLTALGQLVSPRIYPLIRHNPASMMMRREVLDRLGPYEEVRFGADDEYEHRIRLHCGTGSVVRDADVHTIALHR
DDSLTQSPTTGLNSPTGRQGRIRYREDWIRRHMEEGLSGRQLSQS
>AHV93651.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93652.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MTRQRALVYIHVAAVLFGLTGVFGELIQAGAAVITLGRALFAVASLAFFARVQRRSLLGVLTPVQLFVLVISGALLAGHW
VTFFISVKVGGIAIATLGFASFPAFITLLEGVLFREKVRAAEWMVLALVTAGLVLVTPSFDWADQGTVGLAWGLLSGLSF
ALLALSNRRAASGMDPMQVSCWQNAIVSLIVLPFAVDQLPTLAAIDWMWLALLGVFCTGLSHFLFVSSLTKLNARSAGLV
IALEPVYAIAFAWILFAQQPSVRMLGGAALIVAAIVWSGLRKPGA
>AHV93653.1 A/G-specific adenine glycosylase [Bordetella holmesii ATCC 51541]
MEFAALIADWQARHGRHRLPWQNTRDPYRIWLSEIMLQQTQVATVIPYFERFLGRFPDVAALAAASQEDVMPYWAGLGYY
ARARNLHRCAQDIVARWAGRFPPDAQTIATLPGIGRSTAAAIAAFAYGERSPIMDGNVKRVFTRHFGIEGDPSKRELEQR
LWRLAEDLVSAVPGLDMTAYTQGLMDLGATLCTRGKPACDRCPVAASCIARRDGRQQELPTPKTRRAVPERQTAMLVLEH
DGAIFLQQRPSPGIWGGLWSLPEFDAGGDARLACRALGLEPQTHYELAAFAHTFSHYRLHVRPWYVTAAPAGLRAGTLPE
RWVPSNELNAIALPAPIKKLLLGLAEAGLPGTLPLQPSILDR
>AHV93654.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRS
>AHV93655.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MVFLMSVATGLAVAGNYYAQPLLHIIGEQFQVSNATTGSIVTIAQLSYAVGLVLIVPLGDLVERRRLIVFMTALSAVGLL
ISASAPGISWLMLGTFLTGMLSVVAQVLVPFAATLADPAQRGRIVGTLMSGLLLGILLARTASGVLADLGGWRTVYWVAS
VLLLGMSVVLWRILLDHRGSAQLSYPRLLMSIVHLYREEPLLRARSIIGGLIFACFSMLWTPLTFLLSSPPYGYSTTTIG
LFGLAGALGAYAARAFGRMADQGLGNRATVAGLVLLLGSWGLIAWGAHAVIPLLIGIIIQDMAIQGVHVTNQSAVYRLRP
EARSRLTAGYMTSYFIGGAAGSLASAWIYGHYGWYGVTATGAITALLALLYGCLAKGPASPQPRLPHPRPSTSYNLGFER
PSAGRTHPYFYARVHAGTLSTYSRRSGRPRRLAGP
>AHV93656.1 dltD domain protein [Bordetella holmesii ATCC 51541]
MSLLIRNSRLLSHIAAAFTACVLAAALYWIADRFLDSNVQPISNAPSVTDNYLPNLGPDWGTQHVNLNRLSRALSDGTLV
VLGSSELSSHDLRFVPYHFFPRELKVPTLAYGHAMFQSYGIVSVLESVADSLTPNTRLVVMISPAWFASGGQLPRSAFAE
HVTGPVWDRLWNRQATREQMQTWISDNANWGLLWLLANGQVSEFKDKVAAWWHARAQPQLDMPRSALAVPAHKFVSWPSS
ARLSGQHWSELIDQATDVERELGSKNPYDVRDDYYEKYLAMLPSPARNEFPDVPPMTRPELGDLARVMALLQQRKVRAYF
VIQPFNPKLILDVERFDPVVTAIMGMCERYDMGCLDLYSIPFQPGMVRDDMHLAEVGWALADRGIAEFFSR
>AHV93657.1 glycosyl transferase 2 family protein [Bordetella holmesii ATCC 51541]
MDKPAYRFTVLTPTYNRAAMLHRVYQSLVGQTLRDFEWLIVDDGSTDNTEEIVGQWQARSAFPIRYVWQNNQHKKTAFNQ
GVKQAHGELIVALDSDDEMTPDALAILDQAWRDIPAGERAGFVAVTGLCARPDGRIVGDRFPSDVLDSNAVEMYFRYRVQ
GEKFGCMRTDVLRQFPFPQDVPGFVPESLVWWAIARAGYRSRFINRVVRIYHDSADSLSQGQVSAGGNAQGLYLLAWDML
QHHTAQFRFRPKGFLMAAARYTRFRLLLKHAARQTAAGTYRLTHPVGRLLAWLMWPLGYLLYLRDRARS
>AHV93658.1 cobalamin synthesis cobW C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSTATALPVYLLTGFLGSGKTTLLSRLVHSPTFQDTAVIINEFGEVGLDHLLLGQADDNDVVLLDSGCLCCASSSSLAET
LESLYYRRQREELPAFSRVVIETSGLADPGPVINTLASDTLIARHYRFAGAVATLDAVHGVQSVHDYREAATQIAIADRI
ALTKTDIAAPPSTDAAYQLLHERNPTARVLPTTPDNIEQSAPALFEDLQAGHLDALPAPLSGPATPIAHVLRYGIASYIW
RQIAPIGWEAYARWVRHMQRHLGERVLRVKGLLRWADGSLRSVHGVHHLFNAPEPLTGLAASAPQAGALVVIARDLSSEE
LAEAMTQLQSST
>AHV93659.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MLTATRISPAIFHTQGGLTVDADGGVLRRDGSRIAGLWAGGGAASGISGNKGSLGYMSGNGLLAALGLGWRIGQVLAAEL
NEATP
>AHV93660.1 hypothetical protein D560_3585 [Bordetella holmesii ATCC 51541]
MHKPNEIVLKRAYDPVGTDDGYRALVDGLWPRGCSKASLKLDEWAKLLAPTQATRKAYGHDPPLWETFRHDYGRELAQSA
QQERMRALLTAAAGRRLTLVYAAHDGLHSNAEVLHEALLRMVKSS
>AHV93661.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MMGQLGAPVGFLVASALFLFLLLTLSEADFLAWGWRYPFFVAFAINVVALFARLRLVVTEEYTRLLEEGELEPISVSEIV
RVQGYNLFIGAFAALASYALFHMVTVFPLSWIAVSGTQQIADVLVAQLIGGVLGILGTIASGMLADRIGRRTTLGLLALL
IGVFALFTPWLLGGGPKAQNAFILIGFFLLGLSYGQASGTVTANFSRRFRYTGAALTSDMAWLIGAAFAPLVALALSARF
GLVAVSIYLLSGSACTLLALGINRALAVRE
>AHV93662.1 hypothetical protein D560_2344 [Bordetella holmesii ATCC 51541]
MKSKPVLAAEDVKKILAAAEAHALAHQWAVSIAVVDDGGHLLGMLRGDGAAPISAHIAPAKARTAALGRRESRVYEEIIN
NGRYSFLSAPEIEGMLEGGVPVVADGQVVGAVGVSGVKSSEDADIARAGIAALGL
>AHV93663.1 ACT domain protein [Bordetella holmesii ATCC 51541]
MAQIVFFENVHPSARAVFEAAGYSDIATHSTALPAAELRAALRGAEVVGIRSRTHLDAELLAEFPDIRVVGCFCIGTNQV
DVDAAMKRGIPVFNAPFSNTRSVAELVLGEAILLLRRIPEKNLRVHQGHWDKSAAGAFEARGKTLGIVGYGNIGSQISTL
AEAIGMRVVYFDVEAKLPLGNARAAASLNELLSQSDVVTLHVPGGKGTENIINAEALSQMRRGAILINASRGAVVDIDAL
NTALRQGHLAGAALDVFPSEPKGPDEPLASPLIGLPNVILTPHIGGSTQESQENIGREVAEKLVRFLRAGTTKTAVNFPE
LAYVEPAGAARILHVHRNAPGALGTLDNLLAEHGLNIVSQTLQTRGQIGYVVTDVDGTVDDTVMSALRSHPITVRCDRL
>AHV93664.1 tripartite tricarboxylate transporter TctA family protein [Bordetella holmesii ATCC 51541]
MIMQSLTDLWYGFGVAFQWHNLMWSFFGVLVGNLIGVLPGMGALSAISILLPLTYVMQPVPAILMLAGIFYGSQYGGAIG
AILLNLPSHPPHAVTCLDGYPLTKQGKGGTALGITMICSFFAASIGIIVMVFASPLLVEVAFKFGPTEIFSIMLLGLLAG
ATMSRGSPLRGVAMTLFGLLCGVVGTDVNTGTIRFSFGLLDLSDGLELVAISMGLFGVADFLMSVNRMASISTGAKLRVR
DMRPSKAEMKEAFMPMVRGTLVGTLFGAMPGTGPTITTFIAYALERKVSKTPEKFGTGMIAGVAAPEASSHSKTQVDFIP
TMSLGIPGDAVMALILGALLIQGIQPGPQLITEHPDIFWGLIASFWVGNVLLMVLNVPLIGVWVKLLQVPYRYLFPSALF
FIAVGVFSTQNSLFQIWEVLAFGVIGAFLMFLDFSVAPILLGFVLGPMVEENFRRALLLSRGDMMIFVERPISAWFIGAS
ALLILAQIWAFARRNRKKPQTAQTAA
>AHV93665.1 putative transcriptional regulator [Bordetella holmesii ATCC 51541]
MRNIGIAPIEATDRAVLAIGTYYPDGLLLDWHCHRRAQLLYGATGLMQVAAGKGAWVVPSGQALWIPAGWNIGCACWA
>AHV93666.1 bacterial lipoate ligase family protein [Bordetella holmesii ATCC 51541]
MHGEYKVPGGKLVVADLSVSDGLLSDVRISGDFFLEPPEALARINQALTGLPAQADEAQLSQAVRQALPADVEMFGFSPE
AVAIVVRRALA
>AHV93667.1 hypothetical protein D560_0390 [Bordetella holmesii ATCC 51541]
MHGLSPREFFRVFILVLRFKHKKTRHKLGGFPIFSGVFCSFCSFCFPNAQTQGDRCDPSSAPKRHHLKLAIIPISVYGKA
RATCRLRHL
>AHV93668.1 glutamate/Leucine/Phenylalanine/Valine dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MQSLNDFLGRVASRDPHQPEFMQAVHEVMGSLWPFIEKNPHYGQQALLERLVEPERVIQFRVCWTDDKGRAQVNRAFRVQ
HSSAIGPFKGGMRFHPSVNLSVLKFLAFEQTLKNALTTLPMGGGKGGSDFDPKGKSDGEVMRFCQALMIELYRHLGPDTD
VPAGDIGVGGREVGFMAGMMKKLSNSAAAVFTGKGLTFGGSLIRPEATGYGTVYFAEQMLHRVSMSFDGLRVSVSGSGNV
AQYAVEKAMALGARVLTVSDSGGTVLDEAGFTPEKLHALMHIKNVQRGRVEDYAQQLGLRFLPGVRPWQIPVDVALPCAT
QNELDENDARTLIDNGVKCVAEGANMPATLAAAQAFIDAHVLYAPGKASNAGGVAVSGLEMSQNSARLSWTREDVDQRLR
AIMCDIHENCVRHGHAESGYVNYLDGANIAGFVKVADAMLQQGLY
>AHV93669.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MLIAALLGLVMGAIAIRRSGIYFAMITLALAQMVFFFFLQAKFTGGEDGLQGVPRGKFLGLLDLSQDINLYYVVMAIFAI
GYFIIWRTVHSPFGQVLKGLRENEPRAISLGYDTDRFKLLAFVLSAAIAGLAGATKTLVFVSATLSDATWQMSGLVILMT
LIGGLGTLTGPIIGAFVIVLLENKVGDFGQFMANLTGADWFLRLGESVTIVIGLIFVICVMTFRRGLVGEFSAWLQRRRS
ARA
>AHV93670.1 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein [Bordetella holmesii ATCC 51541]
MREDGRMIHDMYLMQVKTPAESKAPWDYYKVVATLPGEEVYTKLSESTCKLVKK
>AHV93671.1 hypothetical protein D560_1551 [Bordetella holmesii ATCC 51541]
MASASTSYENAYSERRFWHKLAGHAKASGRQVLEKALWLYFALQDPATPKWARRVIYGALGYFILPLDAIPDFAPLVGYT
DDLTVMTTALATVAFTINDQVKAQARQRLDGWFGPAG
>AHV93672.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVEKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93673.1 tadE-like family protein [Bordetella holmesii ATCC 51541]
MPHLPALRQRGAAAIEFGITLILLLMLVVAIVGYGAWFWAQQKVTKAAGEGAQALLQTGFHTGSANMAAACAAARQEAAW
MAITCAAQSQPCSWTNAAGVAQRCARVSVSYNANTWPLLATMNSLAAAFSSNPWFPSTLNAWAVVQIPQDVTP
>AHV93674.1 malic enzyme, NAD binding domain protein [Bordetella holmesii ATCC 51541]
MDANFRKAALEYHEHGRPGKISVTPTKQLTNQRDLALAYSPGVAAACEEIVDDPVNAFRYTARGNLVGVISNGTAVLGLG
NIGALASKPVMEGKAVLFKKFAGLDVFDIEINETDPDKLVDIIAGLEPTFGGINLEDIKAPECFTVERKLRERMKIPVFH
DDQHGTAITVSAAFINGLRVVGKDIAKVKVVSSGAGAAALACLSLMVDLGLPIENVWVTDIEGVVYEGRTALMDPDKARF
AQKTDARKLAEVIADADVFLGLSAGGVLKPEMVATMAARPLILALANPTPEILPEEAHAVRDDIVMATGRSDYSNQVNNV
LCFPYIFRGALGVGATTITPAMERAAVYAIAGLAQEEQSEVVAAAYGTYDLSFGPDYLIPKPFDPRLIVRIAPAVARAAM
EDGVATRPIADLDAYVEQLQQFVYHSGAFMKPLFASAKRFVREGGRARIVFTEGEDERVLSAVQVVVDEGLAIPILVGRP
SVLSARIEKFGLRLRLGQDVEVTNPEYDERFHQYWTTYWELMCRRGITKEMARVEMRRRSTLIGAVMVRLGDADGMICGA
VGAYHDHLRFVDEVIGKKPGANIYAAMNILLLNERTVALADTHVNDNPSAEQIAEITQAAADEMRRLNLAPKAALLSRSN
FGSGSSASGAKMREALEILHAQSPELEVDGEMHGDCALDEALRLRILPSSTLKGEANLLVCPIVDSGNIAYNLLKTAAGG
NVAVGPFLLGANAPVTILTSSSTVRRIVNMTAMTVVDANVAR
>AHV93675.1 flavin reductase like domain protein [Bordetella holmesii ATCC 51541]
MPSHFQVVALEHASRLINHGPTVLITTRHGAVRNIMAAAWSMPVEFTPPRISVVIDKHTYTRELMQASGHFGLLIPGAKA
ADLTYAVGSVSGRDGDKFVRCGVEPLSGPALGLPLLEDGMAAWMECRWIPETHTEDAYDTCFAEVVSAAADSRIFAGGHW
NFSQDNRDLHTLHHLGGGAFAIAGTPIQAQAR
>AHV93676.1 helicase conserved C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSFEDLGLAPSILSALQTAGFTEPTPVQAAAIPRALAGADLMVSSQTGSGKTAAFMLPALNRVADMSPNKGVGVQILVLT
PTRELALQVADATAAYGANLPGLRATTVVGGVPYGAQLKALSRRVDVLVATPGRLIDHLKAGRVKLNTVHTLVLDEADRM
LDMSFIEDIETIIERLPESRQTLLFSATLDGSVARLAEKMMRSPERIEISGHRDKHANITQSLLYADDSSHKLRLLDHLL
RDTRLDQAIVFTSTKRGADELADRLAEQGFAAAALHGDMNQRQRTRTLTQLQRGQVRVLVATDVAARGIDVQGISHAVNF
DLPLQAEDYVHRIGRTGRAGRDGLAYTLAVHSERHKVRRIEHYIGQTIAPETIAGLEPQRTARPSSGGPRFGGNKRPGER
RFGDRPQGDRPQGDRPQRDFGDRPQRSFGDRPQRDFGDRPQRSFGDHPQRDFGDRPQRSFGDRPQRDFGDRPQRSFGDRP
QRDAGDRPQRSFGDRPQRDFGDRPQRSFGDRPQRDAGDRPQRSFGDRPQRSFDNKGAAAGKRFSKPAGDRRG
>AHV93677.1 DHH family protein [Bordetella holmesii ATCC 51541]
MVTPRLTVRSANLSACQALQNAGIHPLLARLWAARGVTEAGQTQMNWPSLLPPGTLTHSEHAAAVLADAIAAGKRLLIVA
DYDCDGATACAVGLRALTAMGANVDFLVPNRFETGYGLSPAVIDLAIKHRSGKPDLIVTVDNGIASVDGVAAANDAGIGV
VITDHHLPGDTLPQALAIVNPNQPGCGFPSKNLAGVGVIFYMMLALRAELRRRGVYPPDGGPRLDALSDLVALGTVADVV
KLDANNRLLVTQGLQRMRTGRMQPGLRALFAVAGREPRSASGFDLGFALGPRINAAGRLADMSLGIACLTTDDEDQALRM
ARELDAINRERRGIEAEMRDQAMAAMQAPDAVAGATVCVFDPSWHQGVVGLVASRLKENSGGPHWPSHRPVTTKSAARAA
RSWTCICAMCSIWCPSAILA
>AHV93678.1 formiminoglutamate deiminase [Bordetella holmesii ATCC 51541]
MNALHAQHALLPDGWARDVLLQWDDDGRLTSVQPGIPAGTWPQADGPLLPAMPNLHSHAFQRALAGLTEYRGQARDSFWS
WRTLMYQFANRLDPQALEDIATWLYIEMLQAGYGSTCEFHYVHHDADGRPYADDATLSLALLAAARRSGMRLTLLPVLYQ
TAGFGGQPPNDGQRRFIRSTDDMLRLLERLNPHCQAQDAVLGLAPHSLRAVPPDSLGPALAGLDAIAPGAPVHIHIAEQI
KEVEDCLAWSGQRPVRWLLDHARVDDRWCLVHATHLDEEEIRLAAASGAVAGLCPTTEANLGDGIFPFSAWREAGGAWGL
GSDSHICVDAAEEILMLEYSQRLASRQRNVGALPHCPQVAQALMQQALDGGARASGRPGSAQLRAGGLADFFTLDTRLAA
LADFSPEQMLASHVFAASRSNTRRSAWIGGRQYVESGRHHLADKAAQAFIAARRTLLAA
>AHV93679.1 disulfide interchange protein DsbA [Bordetella holmesii ATCC 51541]
MPSPSISRLLAAAALAATTFFAPASHAQGNNNGYVAISPALPTDTPGKIEVLEFFAYTCPHCAAIEPMVDDWVKTKPQDV
VFNQVPIAFNASMKPLQQLYYTLLALDRPDLHVKVFNAIHGERKRLFDKKTMGEWVAAQGVDRAKFDAVFDSFSVQTQVQ
RANQLAEAYRIDGTPSFAVGGKYMTSPVMAGNSYEGAIKEVNKLIPMARGQ
>AHV93680.1 outer membrane porin protein [Bordetella holmesii ATCC 51541]
MEKTLLATALGLSLAGIAQADTSVTLYGVIDTGIGYNKIKGPGFDGSRAGMINGIQEGSRWGLRGTEDLGDGLRATFKLE
SGFDSGNGSRAQGDRMFGRQATIGLANNAWGSLEFGRQATVGSNYLADIDPFYTSYTQANIGAGFSAANTMRWDNMVMYK
TPSFNGFELGVGYSFNVDSNDASQSGFRTADNTRGITAGLRYLQGPLNVTLTYDQLNGANRSSTINNDATPRQYAVGVSY
DLEVVKLAAAYGRTTDGWFVGQDLPSGTPYSNEFGNYRFEDGFKANSYMVGATMPVGGAGSLFGSWQMVDPSNDRLTGGD
EKMNVFSLGYTYDLSKRTDLYAYASYAKNYAFIDDLKSTAVGVGLRHSF
>AHV93681.1 asnC family protein [Bordetella holmesii ATCC 51541]
MLLDTIDLKIIALLQKEGRLSNQHLADRVALSPSACLRRLRTLEEEGVILGYEARIDPIHIGQAFEAIVHVSLDQSQPHW
HEAFVEQLAGWPEVHEASIVTGASNYILHVRTTDLAAFSNFVVDKLNRSHGVREICSHIVMRKVKAPGRPATPS
>AHV93682.1 hypothetical protein D560_2543 [Bordetella holmesii ATCC 51541]
MDNLRCVFCSFHGWRIAAILLHDSGIFPRLSRSIPQE
>AHV93683.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANQPLLTAYLMRDEL
KQLWFYQHPGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEY
FFLKIRSAFPGIPR
>AHV93684.1 exodeoxyribonuclease III [Bordetella holmesii ATCC 51541]
MQLATWNVNSLNVRLPQVIAWLADNPVDALCIQELKLADDKFPLEAFTQIGYHAAWAGQKTYNGVAILTREPGQAMVRNI
PGFDDPQQRVIAVTLPTPAGEVRIICAYCPNGQSVGSDKYAYKLEWFTALHRWLQEELRAYPRLAILGDYNVAPADEDVH
NPEKWEGQVLVSEPERAALKSLLDLGLTDAFRLFEQPEKSFTWWDYRMFAFRRNAGLRIDHILLSDALKHTCTACVIDKA
PRATNSPRITPRSSPHST
>AHV93685.1 phosphoribosylglycinamide formyltransferase 2 [Bordetella holmesii ATCC 51541]
MLLGSGELGKEVIIALQRLGVEVIAVDRYADAPGHQVAHRAHVVSMTDPAALRAVIDAERPHIIVPEIEAIATDLLVELE
AAGAVRVTPTARAARLTMNREGIRRLAAETLGLPTSPYRFVDTLDELREAIAAIGYPCVIKPVMSSSGKGQSVIRDEAGV
DAAWRYAQEGGRVGGGRAIVEGFINFEYEITLLTVRARRADGQIETQFCQPIGHKQVDGDYVESWQPHPMSARALERAQE
IALGVTGELGGLGIFGVELFVAGDEVWFSEVSPRPHDTGMVTLATQAQNEFELHARALLGLPVNTTLRQPGASSVIYGGL
DDRGVTFHGVAEALAEPGTDVRLFGKPEAFTKRRMGVGLAVAETVEAAREKALRVSAAVAVKAG
>AHV93686.1 hypothetical protein D560_1564 [Bordetella holmesii ATCC 51541]
MRHEAFLLHLFVQRLLVLTHVALPVGGVLGAAGSTTGASVATAGSLWRMGELGAWRQVMRPDGRPPWWPGARCCVRHRLR
PH
>AHV93687.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MHKTALTAEEEAYQFIQQQIRLGQFAPGARLVPENIAGQIGTSRMPVRGALRRLASEGLVEIRANRGAVVRGLNRQEMLE
VFEMRSVLEGLAMRNAVSNMAPEHIRRLTGMLDLMEQGYLDWTTTHREFHEYLCGFCKQPRLLSQIAELHSVVEPYMRLW
SAQPGRALRARASHQELIDALKTGDPTQCEAAMRQHVLNTVVVLLDPLT
>AHV93688.1 hypothetical protein D560_3848 [Bordetella holmesii ATCC 51541]
MTLRKLVEEARKRDKGVSDRRERQDATYHFLHAVAGNLPAYEEALRGLYAGDRAALVACMQGWPPDIVDYALALHDRD
>AHV93689.1 4Fe-4S binding domain protein [Bordetella holmesii ATCC 51541]
MFLPLPDNTASVFNNLTVLAQFAFWGIWWPFVLVSMPLLGRAWCGWFCPEGMLTEWASERGQGHAIPKWMRWGGWPFVAF
ALTTVYGQLVSVYQYPLAVLAVLGGSTVAAMIVGYRYGHSKRVWCKYLCPVNGVFNLLAKLAPWHYKVSEEAWRHPVIRI
EPINCAPLVPLRHMKGAGDCHMCGRCSDYRGAIALTPRSPEEEIVDVAHGDGWQTILICFGLMGVAIGAFLWSASPWFVT
FKQWAATLLVEHDITWPLVDNAPWFILTHYPEVNDSFSWLDGLGILVFVGAAVLCVGGAAFLGLWLADRISPLAPRGPGL
AGVHKLAQSLIPSAGIGVFLGLSATTVTLLQHEGVRTGWVAPLRFTLLTLAVLWSLRLAARVLGQRPGGALRHVLSWLLV
GAGLVPFCLAWWLFFVAW
>AHV93690.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MPHPLSHIRVLDLSRVLAGPWASQTLADLGATVTKIEQPEVGDDTRAWGPPFLKREDGSRTGESGYYLICNRGKRSVTVN
LKSSQGQALIRRMARDADVVLENFKVGTLDRLGLGYEDLRRENPRLIYCSVTGFGQTGPRAQQPAYDFMIQAMSGLMSIT
GESDDRAGGGPMKIGVPMVDLITGLYAATGILAALARRDVTGEGEHVDMAMLDVGVTLLTNQAMNYMLSDQVPQRRGNRH
PNIQPQRVYQCRDGRIILAIGSDTQFAKLCRVLGHPDMAQDERFRNNAGRVTHLAELDPWLDEQLLQHDKAPLLAALEAE
GLPSAPINTIADVLQDPQVRHREMRFDVSHPDGMPMPQVRSPIRFRNSSLRLDQGPPTLGQHTDEVLAEMGLSNAEIVQL
RSEKAI
>AHV93691.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MQLFRRLAALAACSVVASIATATAHAADAGADWPQRPVTLYLGFPPGTSTDMVARLLGEQFSKRWGQPVIVENKPGVGGS
LGAATAARMPADGYTLLLSASGPMSINPHVYKNVGYDSATSFAPITQTTWLPYALVVRPDFQAKSLQELIALARSQPGKL
TYASTGVGTNSHLIMAMLQAKTGMTLTHVPYKGSSQSQADVLGGNVDMTFDTLASELPMIQSKRLMPLAVSKGQRTDLAP
DVPTVAEQGFPNFEVGAWLGLFAPAGTPDAVVRKVFDTTQQVMNDPAVRQKMITLGSEVRLSQSPEAFAAMMRDDYAMWG
KVVEETGAKSQ
>AHV93692.1 bacterial regulatory s, luxR family protein [Bordetella holmesii ATCC 51541]
MNASHTPLVYLVDDDDAVRDALALLLRSVGLRSEGYADPLQFLQQPLGQIVGCVVLDIRMPGISGLDVLSKLAEHSDMPV
LMLTGHANVDLCRRAFKGGAIEFLQKPVDDDLFLDTVQAAVRSHSASRERAAVTEAALMRLQRLSAREQDVAQRVVQGLA
NKEIAREFDLSPRTVETYRANVFAKLEVSSLAQLIRQYALLLEAPAP
>AHV93693.1 hypothetical protein D560_3842 [Bordetella holmesii ATCC 51541]
MPLHVGGRFALALQGHEHYLRLGDAGTITLYGPAAPPGWVGKLSMEQRVEYQGKGPFDLPAVSFTAEVSETALSKVGLAW
HPATPGVDALVCSTPERAMLELCDGVSSAAGVYEADALMQAMTTLRPQRVGLLLRHYRSIKAKRLFLALADRHRHAWLAH
APLDGVDLGRGKRALVPGGRLHPAYQITLPGDLDEHLA
>AHV93694.1 putative 3-methyladenine DNA glycosylase [Bordetella holmesii ATCC 51541]
MLCRSLGLKVPEWDAQGFDPDVFFVHDAGVAVPTIVRTTRLGIPAGRDEHLPYRFVDPAYAAFCTRNPLRRGQQAGKDYE
WIDGQGAVLPAG
>AHV93695.1 bacterial regulatory, LuxR family protein 6 [Bordetella holmesii ATCC 51541]
MMDADLPRRPGWQDARWAHITQDLALVVASRHPSDEQGTQALGAGARGYCH
>AHV93696.1 cd(II)/Pb(II)-responsive transcriptional regulator [Bordetella holmesii ATCC 51541]
MKIGELAKAAATTVETVRYYEREGLLPAPERGMNNYRSYGQLHLERLRLIRNCRALDMTQDEIRAILSLADNHQAGCGGI
NELFDEHIAHVDARIAELTQLREQLSDLRQRCGSARQDAEDCGILHGLSEMQVEERPQRHTHLG
>AHV93697.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHN
>AHV93698.1 histidine phosphatase super family protein [Bordetella holmesii ATCC 51541]
MTEIWFIRHSETDWNRQRRLQGWQDTPLNDAGQAQARALAERLGSEPLPFDALYSSDLQRTLATATPVSQALGLRVRPEP
GIRERGFGVLEGLDLDRIDELAPAAAAAWKSRDPERVVDGGETLGQFNARIVAAVEDLAQRHDGQRLLAFTHGAVLDIIW
RQASGVSLNAPRQATLFNVSINRVSVQGRQWRILDWGDVKHIADEVGNDVQP
>AHV93699.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MSDDAVKFEVDAGVALVTLNRPPINALNRETRRRLVAIFDEISEREDIRCAVLTGSGTVFCAGTDLKDRPAADVAGDFLE
HNRITRETGNAIRECSKPVIAAVNGAALGAGLGLMAACDIMYASENATFGMPEINVGLAGGASMLRTLFGRSTLRRMFFT
GQRLTAQDLLRRNVLEDVLPAEELLPAALALAQEIASKAPLAVVYAKRAANLVDLMPQRDAYRFEQDFTMALAKTDDARE
ARMAFLEKRQPNFKGR
>AHV93700.1 putative fumarate reductase flavosubunit domain protein [Bordetella holmesii ATCC 51541]
MYDTPQMFQQDLSRIAGEHEAMHLTQALTESSASLVEWLVDQAHVRLTLVETYKHIGHRVHRLHSPPSRRGADLVDDLLV
ECERREIPVAWRNGVSNVSRNLEEGFSVECATPDGAVTHIGARHVVLACNGYAANRQLLARFVPEVAAAPYGGGMGSEGE
ALAWGKRSERGWPI
>AHV93701.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQS
ALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV93702.1 putative transmembrane regulator PrtR [Bordetella holmesii ATCC 51541]
MKDDSLAGGAPIAEADLHALVDGQLTPARRQQVLAYLAGNEAAQRQVEGWSRQKALLHKHLDGVMDEPLPLRLPLRAAPA
RNWGWALAAGVLIAAVSGSAAWMIRGGMDAHAQRSQLAQAADSGGFAQRAAVAHAVFAADMRRPVEVGADQEQAMVTWLT
RRLGAQVHAPLLAQAGYELVGGRVLPGGRGAVAQLMYSSQAGQRLTLYVTHEARGETAAFRYMQDGPVRVFYWVEGSLGY
ALSGAVSREELQRLAHEVYRQLAPGPAEAGANGLKAPSIPNG
>AHV93703.1 secretin and TonB N terminus short domain protein [Bordetella holmesii ATCC 51541]
MRHSYLDLAPLALAFALAIGAPTRVAAQASDAYVNRVIPFSIAAQPLGQALNELARQAGLQLLFAPALVANKTAPAIAGS
LTPSQAAERLLKGSGLQAVPQGGAIVVKPLAADAGMLAPVAVSGYLQTGSGPLQDYVATVSATATKTDTPLMETPQSIAI
VGAQEIETIKAQDLNEALGYVAGVGRKSG
>AHV93704.1 D(-)-3-hydroxybutyrate dehydrogenase [Bordetella holmesii ATCC 51541]
MLKGKVAVVTGSTSGIGLGIASALAQQGADIVLNGFGDAADIEKLRAGLASQYGVQVRYDGADLSKGEAVRQLVSGAVAE
LGRIDILVNNAGIQHTALIEDFPADKWDAIIALNLSAVFHGTAAALPHMKKQGWGRIINIASAHGLVASAAKSAYVAAKH
GVVGLTKVTALETAGMGITANAICPGWVRTPLVEKQITALAAKDGVDQESAARELLGEKQPSLQFVTPEQLGGTAVFLAS
EAAAQITGTTISVDGGWTAR
>AHV93705.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MYGLPLAVGAEPVAAQVADLPAIQVTESRSGVATRSGTRTDTPLREVPQTLDLVDPAQAEVYGVRTLGQALEGLPNVSDA
QDTRFDALRIRGFSSGSDFFLDGLRDDSQYVRDLHNVERVEVLKGPAAALYGRGAPGGIVNRISKVPEPGRASSVALQAG
SHDLRSGYLDGSFDAGTSLSLRLNAGAQSWGSFRRRIRGERQLLAPALAWRVSPTLNWLLQYEYSRYDRVPDRGSPVLAA
GRRTCRTAPSMAIPGGTTLTTRPAACVHGWAGVWLRAGSCATRCPGLPCTAISTTLT
>AHV93706.1 phosphate regulon transcriptional regulatory protein PhoB [Bordetella holmesii ATCC 51541]
MSSTILVVEDEPAIQELIAVNLSFAGHKVLRAFDAEQAQTLIRAELPDLILLDWMLPGMSGLSLARKLRDDERTRNVPVI
MLTAKGAEQDKVDGLEAGADDYITKPFSPKELMARIKAVLRRRAPQLTDDIIDVSGLKLDPVTHRLSGNTQPLQIGPTEF
RLLHFFMTHPERVFSRSQLLDQVWGDHVFVEERTVDVHIRRLRKALEPSGHDAHVETVRGSGYRFTSQVPAR
>AHV93707.1 STAS domain protein [Bordetella holmesii ATCC 51541]
MTKSMNFIDQAGAQVWEDELKRRRALGGDIYFHRPWPEVLATWQRTGFVERLGPDHIFPDKATAIGSIYQRLDPAVCRSC
QARCFLECGPPGTAHQSGQAESAVPPGCNPDASNVGR
>AHV93708.1 hypothetical protein D560_2278 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSIPLYPRWLF
>AHV93709.1 ferredoxin-fold anticodon binding domain protein [Bordetella holmesii ATCC 51541]
MLDTVATLIKAEPQLAVVQDIQLFDVWRDKPHEAEPVAEKSLAFRFWLQDTAVTLDEARVAECISRIKDALVSAHGARQR
V
>AHV93710.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MPDTTWMNWPFFESWHADMARELDDWCTRELPGIDHQDTDAACRQLVAALGKAGWLRYCVPAGPGGAWGGKLPDVDSRAV
CILRETLARHEGLADFALAMQGLGSGAISLMGSAELRQRYLPRVASGQAIAAFALSEPDAGSDVAALQCSARRDGDSYVL
DGTKTWISNGGIADFYCVFARTGEAPGARGISAFVVDAHTPGLRIAERIDLMAPHPLATLVFEQCRIPAAQRLGDAGQGF
KLAMMTLDIFRASVAAAALGFARRALDEGLHRARTRRMFGQTLADLQLTQAALGDMACDIDSAALLTYRAAWTRDVRRER
STREAAMAKMAATESAQQVLDRALQMFGGAGVVSGQTVEKLYRDIRALRIYEGATEVQKLIIARELLKN
>AHV93711.1 asmA family protein [Bordetella holmesii ATCC 51541]
MVIRQVQLTHPSANLERQADGQANWVFVMPDTGKPSPWTIDINEIGFDQGRVGYQDALLKADLEVLIDPLGKPVPFAELA
GNALAKKDAPAAADKAAEPQPPDYVFGWKVKGKYKDLPVQGEGKVGGMLALRDASQPFPIQAEVSTGSTKASIVGTLTDP
MQLGALDLRLKLSGASMANLHALTGVTLPDTPPYSTDGHLQARLHEAAGPVFHYRDFNGKVGNSDLHGDISFAMQAPRPK
LTGQLSSNLLRMADLGPLAGVKSGAGTTAKSLKAEGEKTVAQPADKVLPVQEFRTDRWHDMDADVKLSAARIIHGDSLPL
SNLNVGVLMQDGQLTLDPLRFNMAGGRLNGKLSLDGSKSPMAGRINMAARNLQLKELFPKMQSMERTLGELNGDATLSGS
GNSVAALLGTATGDTQLLVNEGVISRALMEIAGLNVGNYVVSKLFGDDEVKINCGAADLQMKSGVMDTRLFVFDTENAII
TIDGSINFRTEAMDLDISPESKGFRLFSLRSPLYVRGTFKHPDTGVHVLPLAARGAGAVALGVLLTPAAGLLALIVPSSP
QDNQCSELFQRLKQPPAKK
>AHV93712.1 tRNA pseudouridine synthase family protein [Bordetella holmesii ATCC 51541]
MGSGVNAFLPSSISVHWALEVPEDFHARFSARSRSYVYLLWRGRVRPALWAGRAGWCFQPLDVAAMRQAAQTLLGEHDYS
SFRSSQCQARHPVRTMSRLDIAECGDFLVFTLQANAFLHHMVRNIMGALLQIGQGREPVAWMGHLLAVRDRRLGAPTFSP
DGLYLSAVDYPRAFDLPQLDGAGTFLAPFTSASQP
>AHV93713.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MGLFSKLSYDPRRDLRPVTQLIESPALVVVPNNRSYHDFPALVDAAGKQTLAYASQGVGTGGQLFGTLLSAKIGAPMTHV
AYRGSTPGLADVISGQVDFMYDAIPTSGVYAKAGKLRALAIGSEARSALFPEVPTLKELGYASIVPTFWWGVAVKAGTPE
PVVAKLHDAIVAAITDPEVAAKFTGQGVLVKTSSPDEFAAYIDSEISRWTPIMKEAGMSAQ
>AHV93714.1 putative transporter domain protein [Bordetella holmesii ATCC 51541]
MPDFLLVALGWVLRHRLGFTREFFAGCERLVYFVLIPALLFQSILRTPISAGNAVLLLQAAFAVIAAGVALS
>AHV93715.1 prokaryotic cytochrome b561 family protein [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSRLFHWALVACVAGAFITIKLGGLYMDWHVR
FGLATLGLILFRVLWGLFGSHYARFAQFVRGPAALAAYLRGRLHVAGHNPLGALSVLAMLLALGFQAVSGLFVSDDIMIQ
GPLNGYIDADLAATLTRLHKANEWVLIALLGLHVLAVLWHTLVRREPLIKTMITGDASEAAATRGCVPARDDAAMRLRAL
LIAACCAGVVLWVNSLQTLPAY
>AHV93716.1 AMP nucleosidase [Bordetella holmesii ATCC 51541]
MYSAANLYRPEPIPFERFDDARAAVERLTQIYDRNTAFLRQAFQDVLHGRNVSGRVRACYPALRISVQTYDPIDSRLSYG
HVAEPGCYQTTVTQPGLFTDYLTEQIGLLLQNHGVPVEIGESDTPIPLHFAFPEGTYVEGEHLDSLRRPLRDLFDVPDLA
VTDDAIVNGSWRGREGEPHPLAPFTATRVDYSLHRLQHYTATAPSHFQNFVLFTNYQFYVDEFCARARAMMAEGRGDYEA
LIEPGNRITRRGETTATADAGQRLPQMPAYHLVRPDHSGITLVNMGVGPSNAKTITDHIAVLRPHAWLMLGHCAGLRDSQ
HLGDYVLAHGYVRDDHVLDADLPAWVPVPPLAEVQVALEQAVQEVAGLSGWDLKRIMRTGTVATIDNRNWELRDQGELVE
RFAQSRAIALDMESATVAANGFRFRVPYGTLLCVSDKPLHGELKLPGMASAFYRRQVNQHLEIGIRALEILSEMAPERLH
SRKLRSFTETAFQ
>AHV93717.1 tonB family C-terminal domain protein [Bordetella holmesii ATCC 51541]
MGLRVGAGIAVLAVHAAVIGAIFFNDTEAPVLLDQEPVMVSVIEAPVPQVAKAEPNPEPPVQETPPPESVVDPTPEPDPE
PEIEPEPEPEPVVEKPPVPAPPPPPKPKPKPKPQPKPQPKTEVKADPTPKPPAGETDGEQVTQAPKQGPAPDQPVFMSSV
EYLGDRPAPRYPSESIRRREQGRVIVLVTINPQGYVDKAVVDSSSGFRRLDDSAIEAVRKARFKPLTRNGIAQTAMARIP
FDFGLK
>AHV93718.1 phosphate ABC transporter, permease protein PstA [Bordetella holmesii ATCC 51541]
MAQSLLNMNNGVYRRRRVVNRCMLTVSLGALLFGLFWLFWIIFTLLAKGAPALSYTLFTEITPPPGQGGGLINAIVGSLL
MAGMGTLIGTPVGILAGTYLAEYGQRGWLAPATRFLNDVLLSAPSIIIGLFIYAVYVAQVGHYSGWAGALALSILVIPVV
VRTTDNMLLLVPNSLREATAALGCPKWRMITMVCYRAARTGIITGVLLAVARISGETAPLLFTALSNQFMSWNMNAPMAN
LPVVIYQYAASPFQDWNNLAWAGATLITLLVLGINILARNMFRKS
>AHV93719.1 outer membrane lipoprotein LolB [Bordetella holmesii ATCC 51541]
MSTRRDWLVRAARLGLTLSLGVVAACSSLPKSQGVAGDSFARAGRFAITATEADGRQQAVQGGFQWQDNGQEFVLDLTNP
LGSTEARVQGRPGAAQLTRANGSRLQANDPDTLAEDALGSPVPVSGLRDWLRGRLASEPAAQSVRRDEAGHLARFDQGGW
SVQLSRYDSAGPQLLMLERQEAGRRIVVRLVINPA
>AHV93720.1 metallopeptidase M24 family protein [Bordetella holmesii ATCC 51541]
MSSTDQRIAALRQAMRRNKLDAYVVPSADPHLSEYLPKRWQARRWLSGFTGSVGTLVVTADFAGLWVDSRYWVQAEAQLA
GTGITLMKIALASTPGHVDWLAAHVPSGGRVGVDGNVLGLAAFRALSRALAPAQVELSISEDLIDEIWVDRPGLPDAPVY
EHLAPHACQPRAERLGRVRQAMAAKGADTHLVSTLDDIAWIFNLRGADVSYNPVFLAHALIGSDYATLFVAEGKIDDALA
AALAADGVDVAPYALVAEALGTLEHDQTLLIDPARVTCGVFHAMDPQIARVEDINPSTLMKSRKSEAELANVREAMAQDG
AALCEFFAWFEAAQGRETVTELTIDEQITLARARRPGYVCPSFATIAGYNANGAMPHYRATEDSHAVIEGNGLLLIDSGG
QYLNGTTDITRVVAVGTPTADQKVDFTLVLKGMIALSRACFPRGIASPMLDALARAPIWAGAAEYGHGTGHGVGYFLNVH
EGPQVISYRAAPGAHTAMEPGMITSNEPGIYRPGRWGVRIENLVANRSWFEGELGEFLCFETLTLCPIDTRCIDAALMRP
DEIAWLNDYHRQVRERLAPLVQGAALDWLLTRTEPLVA
>AHV93721.1 selenocysteine-specific translation elongation factor [Bordetella holmesii ATCC 51541]
MIVGTAGHIDHGKTTLVRALTGVDTDRLKEEKARGISIELGYAYTPLANGDVLGFIDVPGHEKLVHTMAAGASGIDFGLL
VVAVDDGVMPQTREHLAILALLGVDLGAIVITKSDRVNAARVEVVKDEVRALVADGFLRDAPVFVVAASQPDDPGVSELK
AWLDTQAQALAPRPASGLFRLAIDRAFTLAGHGTVVTGTVHGGTVRVGDEKADLRLMPAARPVRVRSIHAQNRSSETGAA
GQRCALNLPGVDKDEITRGDWVADARCFTPSQHLDVELRWQGDTALTAWTPLHVHLGSARALAHAVPLAPSVLAPGQSGR
VQLVFGAAMCAMPGDRYIVRNAQASRTVGGGQVLDANAPDRKRRSPERLAWLDALAAYLSNGDLRPVLAQAPLGISERMV
LRLGAVERIPPEAHWVAPRQGGGRVLIDQACWQALHEDLRATLAAFHAQFPDEPGADAGRLRRMARPQATPVLWQALLES
AAQQELVRRNGVWWQLPDHGVALSQAEVLLAEHVLAQLRQGRYDPPWVRDLGRSLHVSEEDMRRLLRKLMRRGDVVQVVR
DLFYHRDSVQALAAMVARLCQEHGSAEAAAFRDMTGLGRKRAIQILEFFDRVGYTRRLRDGHVLRADSALYLYPQTGAES
LS
>AHV93722.1 polyphosphate kinase 1 [Bordetella holmesii ATCC 51541]
MPIRSVDEPLLLNRELSLLKFNERVLAMAESPATPLLERLRYVCIVSSNLDEFFEIRISSLKEQQRQSPGVLGPDGRTPD
QAFDEVQEAVHRLVARQYDLLNDQILPRLHREGITLHHASEWNEAQQAWAYDVFIRDVMPLLTPIGLDPAHPFPRVYNKS
LNFIVALSGADAFGRQASIAVVQAPRALPRLIKMPAELSGQPEGYILLTSLLRAFVGELFPGLQMLGCYQWRVTRNSDLF
VDEEEVTNLRHALQGELSQRNFGAAVRLEIDKLTPPELETFLQREFSLGPVDTYRVNGPVNLSRLMQLCNVATRPELLFP
AYQAAVPAPFARIGDKPADIFAAVAERDRLLHHPYQSFQPVIDFLTAAALDPDVMAIKQTIYRTGEDSELMQILLAAARA
GKEVTVVVELMARFDEQTNINWAARLEEVGAHVVYGVVAHKTHAKMALVLRREKGRLRRYAHLGTGNYHPRTARLYTDFG
LLTADPRLCEDMDKVFGQLTGLGARRELKALLQSPFTLHQGMVELIRAEARAAKAGRRARIMAKMNSLLEEQVIEELYKA
SQAGVKIDLIVRGVCALRAGVPGLSQNIRVRSVVGRFLEHSRVFYFYADGQETTYLSSADWMDRNFFRRVEVAFPIYDKV
LKKRVIAEAFTYALRDNQLSWQQRANGDYTRVQSRREPFNVHKYLMEKLG
>AHV93723.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MLTQEQAVEIKVMARRGVSIREMAKQLGCSRNTIRRYLREAGAQQYKPREARTTKLDPYKDYLHGRIEAARPHWIPAAVL
LREIQELGYPGGVTQLKEFLGGYKHQEPEPVVRFETPPGKQMQADFTHIRRGRDPLMAFVATLGYSRSSWVRFTTDERAD
TWFGCLRQAFIYFGGVPQHVLFDNAGAIITERDAYGPGQHRWHNGLLAVAQEFGFTPRVCQPYRAKTKGKVERFNGYLKG
SFCVPLAATLKQAGLRFDVTAANAHVGRWLTEVADQRLHGTTRERPAKRLQEERLALLQLPAQHGMLVPATSHRPVPRES
FQHPLSVYNELLEVRA
>AHV93724.1 cupin domain protein [Bordetella holmesii ATCC 51541]
MKLQDIPFGVTDWSEVPVTEHPGDTGKALWRTCQFGDIRVRMVEYTPGYLADHWCHKGHILFCLEGELHTELEDGRRFIL
TPGTSYQVADQAEAHRSSTPVGARLFIVD
>AHV93725.1 lysE type translocator family protein [Bordetella holmesii ATCC 51541]
MQTEALWAYCALAAISVVSPGPATVLAIRNSLGPGMRAVFFGALGNVLGLFCLSAASMLGLGVLLRTSAAMFMAVKILGA
CYLFYLGFKQLRGRSPIVIVAGQCQASRASRSYFLEAVAWH
>AHV93726.1 tol-Pal system beta propeller repeat protein TolB [Bordetella holmesii ATCC 51541]
MTPASSRASLPGVLRSYGLALLLLMAAFIVCQPAHAQLRVDISGTGATQYPIGIADFAGDDVRGRALADIIRADLTRTGQ
FRLINTAGAGLTVDSPIAYDDWRGRGADFLAYGSITRGADGRYEVRYRLADTVKKGQLDGVAFSGTEQELRRIAHQIADR
IYEKITGVRGVFATRIAYVVKQGNTYELQVADADGQNPQVALRSREPIISPTWSPDGSKLAYVSFHSGKPVVYVQTLASR
SQIPVANFKGNNSAPAWSPDGSQLAVALTQDGLSQIYIVSADGSSKPRRITRSPGIDTEPNFTPDGRSIIFTSDRSGGPQ
IYQVGLDGGEARRLTFNGSYNISPRISPDGSTLLYVARRDGAFRIASLNLSTGTETLLTDGRDDQSPSFAPNGMQVLYAT
IQNGRSVLAGVSSDGRVRQTLSVLNGEIREPTWGPFTR
>AHV93727.1 pyridine nucleotide-disulfide oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MKVAVIGAGWAGLAAAAALREADAKVTVFEAGRTPGGRARRVVHPAFGADLDNGQHVMLGAYSETLALMRRLGRNPDALL
MRRPLRLTSLDRQFLLSAPPLPAPLHAAAGLLLARGLSLGEKFAALRLVRALQHCHWQPPRDWTVASLLDYHAQPEAVVR
NVWAPLCLAALNTPLVQASASLFATVLLDTLDGHRRNSDVLLPCVDLSALWPDVVALQVKMRYGDTVRRLQPSAGAVDVN
DESFDAAVVAVPPAIAARLLGNALRGSQSPGLLRALQAFEYQPIATLNLRLAAPWSLPEPMMMLRENPERGQVGQWLFDR
ARLTGKSKTGELALVSSAAATVANMERQNAIDALVGQIQEQAAKAGLPPLPAVEVAELFIEKRATFASVPKLTRPLNSTP
WPNLALAGDWTDTGYPGVLEGAVRSGLAAARVLLSARAD
>AHV93728.1 uvrD/REP helicase N-terminal domain protein [Bordetella holmesii ATCC 51541]
MAWLIQTGQASPFGLLAVTFTNKAAREMLTRMAAILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQAFQILDTADQLAA
IKRLLKAQGIDDEKYPPRDVQRFISSAKEEGQRPAEVEAWDAHRRKLIEIYQLYEAQCQREGVVDFAELLLRAYELLSRN
APVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFAVGDDDQSIYAFRGANVGNMADFERDYAHGRVIRLEQNY
RSFGHILDAANALIGHNQGRLGKNLWTDQGEGEPIRVMELPSDGMEAQWVVEEIRALIHEGRSRSEIAVLYRSNAQSRVL
EHALFSAGVAYKVYGGLRFFERQEIKHALAYLRLISNPDDDTSFMRVVNFPTRGIGARTLEQLADAAQSGQTSLFGAVAR
VPGKGGANLAAFAQLIGRLASETRELPLPEMVEHLIEESGLKAHYQAEREGAERLENLNELVTAAAVFATEENVEGLPAG
ELLEGTAPAVGEEPEAALVAPIMTPLAAFLSHAALEAGDNQAQAGQDAVQLMTVHAAKGLEFDAVFISGLEDGLFPHENS
ILEPAGLEEERRLMYVAITRARERLYLTLAQSRMLNGQTRYAMRSRFLDEIPQAHLKWLTPRASSNAGLSSASSIAWTDR
GDAYGRRHTGTIAPRAPRTGTNGVTVGDVQYRVGQGVRHGRFGEGTIIGLSGAGQDAQAQIQFRDVGTKTLALGIAKLDI
VA
>AHV93729.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MVERVIRTLKEQCAHRRRFETIQHASRVVGDWIRFYNYRRRHQALGMKTPAQAFALAA
>AHV93730.1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein [Bordetella holmesii ATCC 51541]
MKKIYVLDAFHPSGPQWLNGRAEVIPFNDPRRAHWHEDADGVMVRMTPLTEADFAKARRLKAVVKQGVGVNTIDLDAARR
HGIVVANTPGVNSEAVAELALALALAVARRVGQFDRMIRAGEEIERPKLLGLGLQGKTVGVIGMGNIGVRAAAKFQAAFG
CQVLAYDPFYKPRAQNDPWAFIDHERIDRLEALWPRLDLLTVHVPLTDATRHMVGARELAAMREGAIVVNVSRGGIVHEA
DLYDAIRSGHIFGAGLDVWQEREPPVSEHPLLSLPTVVATPHAGGGTAETQERSSLQVAQELFKVLEGGQPESRVA
>AHV93731.1 tryptophan--tRNA ligase [Bordetella holmesii ATCC 51541]
MTIRVLTGITTTGTPHLGNYAGAIRPAVRASEQPGVDAFFFLADYHALIKCDDPARVARSRLEIAATWLAAGLDPERVTF
YRQSDIPETTELCWFLTCVTAKGLMNRAHAYKASVDQNEAKGVEPDDGVTMGLFSYPVLMAADILLFNAHKVPVGRDQVQ
HLEMARDIAQRFNHLYKGDFFVLPEVQVEEDVATLPGLDGRKMSKSYNNTIPLFEGGSKALRGAISRIVTDSLQPGQPKD
ADASHLFTLYRAFARPDEVAAFRRELETGMGWGDAKQMLGERLELDIAPMREKYNALMANPGRIEEILQAGASKARKLAS
PLMERLRDAVGLRTLVAAPTAGKGAAKKAVAKGARFVSFRDDDGTFRFRLLGTDGQELLLSEGHANPKDAGVLMRRLQDE
DVELTEHDGSVGVMLQGAVVARGQAGADTIRQALDSLRQE
>AHV93732.1 hypothetical protein D560_3901 [Bordetella holmesii ATCC 51541]
MRELSHSPRLRRLNDGDQPLPHLYAHAVPGHTPGHLFFVLQGAERDALFLGDAAKTRAELASGICEAALDAAQSKASIDL
IWQHWRRKPDSIVIPGHDVPLAQTDGRIRYLDRHEAAIHVAYGDDPHARHDVSLTAIFK
>AHV93733.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MISVSGLRTAFGDHVVHDNLNLTVYPGEILVLVGGSGSGKTVLLREIIGLSQPARGEIRILGRDITTLSMRERRRLSERW
GMLFQAGALFSALSVFDNVALPLRELRTLPEDLIQDVVMYRLAMVGLNAGDALKSPSDLSGGMIKRVALARALALDPELL
FLDEPTAGLDPLRSDEFVDLVRSLHRQLGFTVVMVTHDLDTLLALATRVAVLADKRVIACASVAEILKIDHPFIQSFFLG
ERGRRALGDLAPKEAGNGKP
>AHV93734.1 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit [Bordetella holmesii ATCC 51541]
MRNTFLEFEQPLAELENKIEQLRYVQADSAVDISDEIGRLQQKSQTLAKEIYAKLTPWQTALVARHPQRPYTLDYVREIF
TDFHELHGDRMYADDQSIIGGMARFNGMPCMVIGHQKGRDTKERAARNFGMPRPEGYRKALRLMRLAEKFRLPIFTFVDT
PGAYPGIGAEERGQSEAIGHNLYVMAELKVPVIVTIIGEGGSGGALAIAVGNAVLMLQYSTYSVISPEGCASILWRSADN
APDAAEALAITAPRLKDLGLIDRVVNEPVGGAHRDPRVMARLLRRALGDSLRQLQGLSPEALVAQRLERVLAYGRYQEVR
G
>AHV93735.1 hypothetical protein D560_1136 [Bordetella holmesii ATCC 51541]
MHALHPRDQFILDRLVHAYISACLEWPLEEASMKKPAGKGGL
>AHV93736.1 hypothetical protein D560_1127 [Bordetella holmesii ATCC 51541]
MKGTHLPGYHTAMLMAQKAGGAIDATFILLAQDERKRKKAGTAYAIPAFAARAKGTCKFDR
>AHV93737.1 bacterial regulatory s, tetR family protein [Bordetella holmesii ATCC 51541]
MTTPTPTAARDDGMGNIALLTAAAECFMEQGFYATSIDDVAQRLGATKGRVYHYYRSKTDLFFDVHREGMRRNVEAVRPA
MQAGSNGAERLAAMFHRHALTMMENLAFETVVVHGVHMHRQAAITLAQRRTLDELMVIRDDFEALFKTVANEGAADGSLR
TDDASVAVKAALGAINWMAIWYRPRQGETRQDREALAGKIVSGLMSGLAARR
>AHV93738.1 ribosome-binding factor A [Bordetella holmesii ATCC 51541]
MSRHKSKSIPGRNLRLAEQIQKDLAGIIQREIDMTRAGLITISGVELSADYAHAKVFFTVLGAEPETAAALLNEKAGWLH
SQLYKLLQIHTVPTLRFFHDPQLERGIEMSMLIDRANRGPQSGVPDEPEDQS
>AHV93739.1 FUSC-like inner membrane yccS family protein [Bordetella holmesii ATCC 51541]
MDLRIASIRRFLYSHYFFGGIRQAIGMLLPVLVLGGLFGQYSIGLVATFGAQCLAIIDQPGGPQRHRTNEMLGGALLGTA
TVTLTGAASSYPILLWLAVIAQCFTFSIFSVFGKRGGLIGFAGLLLMTLTMHSPLAPHEVLLHSAATLGGALFYLGWSLA
FSRLFWLREERQAMSVALFATADYMAARASFYDENADLAVKIQ
>AHV93740.1 putative amine oxidase [Bordetella holmesii ATCC 51541]
MVVERSPQDAPVRMHGYANSPASMRLKGGMGRLIEALHRRLNSGRVLTGHTVQSLRKNDYHVVVESVDASGRPVTWHAEH
VLLALPPRLIENTIAFEPALPEALARQWRDTATWMAPHAKYIAIYGSPFWRERGLSGEGRSARGPMGEIHDASMPGGSAA
LFGFLGVPARVRSTVSDEVMRTHCRAQCVRMFGPDAATPKADIIKDWAQDPRTATAMDRDATGQHAQAPASKAASGPWQG
CLTGIANEWSPQFPGYLAGAIEAAGLGVQALTPGVSRAALNKELP
>AHV93741.1 asnC family protein [Bordetella holmesii ATCC 51541]
MRELDRIDRRILDILQRNARISITDLAEQVSLSATPCSERVKRLERDGVIAGYHARLNPAALGKTLLVFLEIRLSAKSGD
VFDKVKQELMYVPEVMECHLVSGDFDYLVKARLTEMAEYRRLLGEILKRLPASAESHSYVVMEEIKESLYLPVDR
>AHV93742.1 flagellar hook-basal body complex protein FliE [Bordetella holmesii ATCC 51541]
MSVSGVSGIENMLEQMRAVMRAAQSGSAGSAELSPATAPASFAAALQNSIRNVSNAQNAATVQAKAFELGAPDVSLNDVM
IDLQKASLGFQMTVQVRNRLVAAYKEISSMSI
>AHV93743.1 tripartite tricarboxylate transporter TctA family protein [Bordetella holmesii ATCC 51541]
MNGVLDHLSLGFGVAFSLTNVLVAAVGSFFGTMVGVLPGLGPINGVAMLIPIAFAMNLPPETALILLAAVYVGAEYGGRI
TSILLNVPGEASAIMTTLDGYPLARQGLANVALSLSAWSAFFGSIVSVTGIILLAPTLAKWALAFGPAEYFVLMVFAFCC
LTSLLGKQPVKGVLAAMIGLGISAIGVDSNSGVYRYTFDSVHLADGIDFVVVVIALFAVAEMLEMLEKVVGGHSVEVKPS
GRKLFNLQELAFTWWSVVRSALVGFGVGVLPGAGASVAAAVAYSQEKRIIENKDPNAKFGKGDMRGLVAPEAAATASAVG
SFVPMLTLGVPGSGTTAVMMGALTLYNITPGPALFETKPELVWGLIASLFIANVLLFVMNVPLVRIFSKVLSVPAWMMVP
GILCISYIGVYAINAGSFDLLMVVAIGAIGYFLRKFEVPMAPLVLGVVLGDMMEQNLRRALSITNGDVRVLFDSSVSVGL
WIAAVAVVVVPQGMRYLRRKRRPAA
>AHV93744.1 phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MDTTGEYHEIVTGVEKDDLGRLCGATYGLGPRVPMYVISPWTRGGWVNSEVFDHTSILQFIERRFGVAEPNISAWRRAVC
GDLTSIFDFTAEASAALPELPPTAALATRAGALPQTTLAVAPDEPAVAYQSQGTRPSRALPYALHIHEQVNERGIELEFI
NAGQAAAVFHVYDRRRLEDPPRRYTVEAGKQLRDVWQQTPYDLWVLGPNGYHWRYAGNMPVLMRLDYRPGQHMLQLTMVN
RDTHRHHLRLAGNTYGDLPPQHLVLQPGGQASVQWSVAATGRWYDVEVDSPDDTAFYRRMAGRMENGQPSVSDPAMGGPL
KLTV
>AHV93745.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93746.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTHECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93747.1 dnaA regulatory inactivator Hda [Bordetella holmesii ATCC 51541]
MNRQLLLDVLPAPAPSLNNFIAGPNGEALAAARALAAGRAIYLWGPAGCGRSHLLRGLATRTQAVYLDAASGPQLLRQLA
QADSTAPMPAIIAVDDVHLMDKSRQAALFALYNRWRESAATDRAFALAVAGDRAPMSLPLREDLRTRLGWDLVFRLEPLS
DADKLSALSAQAADRGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITTALLRAMLAESQAT
>AHV93748.1 chaperonin GroL [Bordetella holmesii ATCC 51541]
MAAKQVLFADDARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKDVASK
TSDNAGDGTTTATVLAQAIVQEGLKYVAAGFNPIDLKRGIDKAVAAAVAELKKASKPVTTSKEIAQVGSISANSDSSIGQ
IIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINNPDKQVAALDDPFVLIYDKKISNIRDLLPVLEQV
AKSSRPLLIIAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTVISEETGMSLEKASLQELGQA
KRIEVAKENTTIIDGAGDGKSIEARVKQIRTLIEEATSDYDREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDAL
HATRAAVEEGVVAGGGVALLRAKQAITGLQGDTPDQNAGIKLILRAVEEPLRTIVANAGEEASVVVNTVLAGKGNYGYNA
ATGEYTDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELAEDKPAAPAMPGGMGGMDF
>AHV93749.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93750.1 hypothetical protein D560_3815 [Bordetella holmesii ATCC 51541]
MPAAWVSRPATQVWLVGGPPNAWRAASCDAVASVYCYRAAVARATAAQARRRIILADLRTLGQAANIEIVLARTEACA
>AHV93751.1 lysR-type regulatory protein [Bordetella holmesii ATCC 51541]
MDLALGAFDGLGGGIVQRMLFRQGYATLFRRAHPRAHAGMAARAFRAERHLIVSRAAPEGQVNQALERAGVSLADQFSVP
HFAAVPYIVSTTDLLATVPQKLAASAASHFGLQMMTPPLKVASLQTNLYWHRRFQRDGANQWLRTLIIEVFADRL
>AHV93752.1 citrate utilization B domain protein [Bordetella holmesii ATCC 51541]
MSADESEVARMMQICNACRYCEGFCAVFPAMTRRLEFDKGDVNYLANLCHNCGACLHACQYAPPHESGVNVPQAMARVRM
QTYTDYAWPQALGSLYKHNGLTLSLAVAATLALFLVLVVSINGGWLHAPWPATSTPSSRTTRWR
>AHV93753.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MPTTIFRRLGAALALGACLVGGAQAAYPDHPITLVVPFPPGGPTDALARRLAEGLKDQLGQTVVVENRGGAGGNIGSEYV
ARAKPDGYTLLFGTSGPLAINVSLYKNQNYDPRTSFTPIARIGHLPNILVVHPSVPAKNEQELIAYARSHPDKLSYASSG
NGASSHLAGVLFNNMAQTRILHVPYKGTGPALNDLVGGQVSMSFTDILTALPFVQSGKLRPIGLASADRSASLPDLPTLA
EQGLPGYDVSVFFGIVAPKGTPPEIVDKLNNAFVNTLESPAVNETLTRQGIVPAKDRSPQALQTFINDEVDKWGKVIHQA
NISID
>AHV93754.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MASIGSKTYDNVAAKKVAFLGLGVMGLPMAGHLAKAGHDVTVYNRSAAKAQAWVQEFGGKSAPTPRDAAKGADIVFACVG
NDDDLRSVVLGEEGAFAGMTKASTFVDHTTASADVARELYARAKELGLNFVDAPVSGGQAGAVNGVLTIMCGGEAPIFDA
VKPVAAAYGRAVTLVGAPGAGQLAKMVNQICIAGVVQGLSEAIAFGQAADLDMKVVLDVISKGAAQSWQMENRGGTMVDD
KFDFGFAVDWMRKDLGLVLTEARNNGARLPLTALVDQFYGDVQKKGGGRWDTSSLITRLRD
>AHV93755.1 hypothetical protein D560_1061 [Bordetella holmesii ATCC 51541]
MGAKTSRSLLEDVIDTHYVVCRDPFYLPQNAAAWKDGHLLGRCQASRSAIRAARRR
>AHV93756.1 nitrogen regulatory P-II family protein [Bordetella holmesii ATCC 51541]
MKLVIAIIKPFKLDEVRVALSGIGVQGLTVTEVKGFGRQKGHTELYRGAEYAVDFLPKLRVEAAVPDHLVDQVVEAIEQA
ARTGKIGDGKIFTAALEQVIRIRTGEAGEAAL
>AHV93757.1 electron transport complex, RnfABCDGE type, B subunit [Bordetella holmesii ATCC 51541]
MPLSITDRIDAILPQTQCTKCGYDGCRPYAQAIAEQGVPINRCPPGGQDGVKALAALLATAELPLDRSRGEPGPLLVARI
DEAHCIGCTLCIRACPVDAIVGANKRMHTVLPDLCSGCDLCVAPCPVDCIDMVPAGRVWTDLDAQAARNRHIDRAARLAR
ETSDNARLMAETPATADAPAAEPPPSLSDEEQKRSAIEAALARARARRSQRG
>AHV93758.1 citrate transporter family protein [Bordetella holmesii ATCC 51541]
MGTLAIVVSLLLLMFFAYRGVTVLILAPIMAAVAVILSGDAAVLLPAYTQTFMSALGGYVISFLPIFLLGALFGQLMADS
GAAYALARWITDKLGSRHAILTVVLACAALTYGGVSLFVVAFAVYPIATALFRHATLPKRLIPASIALGSFTLTMTALPG
TPSIQNAIPIPYFGTNVFAAPGLGIIAAVIMLGLGMAWLLARARRALLAGEGYGEAEDAIQAPDHGDHPGMPLALAVLPL
LMVVGVNALFTYGIFPHMDFSAMGERYADIDPKRVSGLWSLIIALASACIMLIVIRLKHWADLRDTVNKGVFGFMLPLFN
TASEVGYGAVIASLAGFAIIRDAVLDVAPDNPLISEAIAMGTLAGITGSSSGGMSIALATLGSDYLAMAEKTGISPELLH
RVAVLASGSMDTLPHSGAIITLLSICRLTHRKSYGDIAAVTILMPVIALITVIALGTMFGSF
>AHV93759.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MVQAHDLHVHYGASHVLRGVDMAIQSGEAVGLLGRNGMGKTTLIRSLVGLLRPTRGSVRVQGQPAGAAHAIARQGLAYVP
EGRGVYPNLSVRENLLVAARPGKRRAWDYERVLKTFPRLAERLGHGGHQLSAGEQQMLAIGRALMTNPDLLILDEATEGL
APLIVAEIWSIIALIRASGMSTLVVDRNFRAVLAHTDRCVVMEKGQLVEAGNSAELAGQPHLLTRHLGV
>AHV93760.1 hypothetical protein D560_0665 [Bordetella holmesii ATCC 51541]
MVSMSKVVLRRHRASPGFSQKPIKVVILTDLAPEINSVPDLPLKPSSKQVPPSAGKRCCKCVFTLRPAARSRIKIRIKTP
>AHV93761.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MNFKQVEAFRAVMMTRSMTAAAGLLHTSQPNVSRWIALLEQALGFGLFQRVGTRLIPTPEAEAFYGEVERAFIGLESLNE
SASSIRRRGTGLLRVGAVGSITQCVLPDALRLFRQTVSDIPVVMSTGGSDVVAKWMATGFCDIGFCSFLTDIPTLRFERI
NTAYGVGIVARSHRLARKRRLVPADFANEDFISLPAGSYNRAAIDRHFPDDARLLSIETPYATTICSMVSRGLGVSIVNP
VVSRAMRIADLRELPFSEEVAFHSFAVTSEQFPVNGLALKLRDCVHQAFTLLSYQA
>AHV93762.1 gamma-glutamyltranspeptidase family protein [Bordetella holmesii ATCC 51541]
MFTTRPEILGSFGVVTSTHWLASASGMSLLERGGNAFDAAVAAGFVLQVVEPHLVGPAGEVPVLFHSARTGRTEVLCGQG
PTPAGATLEHYRSLGLDLIPGNGLLPAVIPGAFDAWMLLLRDHGSMRVRDVLEPAIFYADTGHALMPRISNTIAGLKDFF
LQHWPSTAEVYLPGGQVPRAGKLFRNPALARTWRRVLAAAEAAGADRERQIEAARDAFYRGFIAEAIDSFVRNEVMDESG
RAHCGVLRASDLAGWSATYEAAATYDYGDYTVAKAGAWSQGPVFLQTLALLKGTDLAAMGPSSADFIHHLTEAMKLAFAD
REVYYGDPAFTDVPLDTLLSDAYNDARRALIGGSASQELRPGQIPGFEAQLARVMDTLSRLSKVTPVGAPGSEPTLADMR
ASVKRGDTTHVDVIDRWGNMVSATPSGGWFQSSPVIPELGFGLNTRAQMFWLEPGLPCSLAAGKRPRTTLTPTLALREGK
PYMVFGTPGGDQQEQWQLLLFLRHVHHGLNLQEAIDMPMSHTQHFPTSFYPRDRKLGHLAVEVSFGRDVIEDLRRRGHAI
EEAPAWSVGRLTAAARDADGLLHAAATPRLMQAYAIGR
>AHV93763.1 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Bordetella holmesii ATCC 51541]
MPAWLSLMLDAFWPLLIAGLQFTVPLTLISFAAGLLLAFAVAMLRLFGPRPIVLLMRFYVWLIRGTPLLVQLFILFYGLP
SIGIVLDPLPAALIGFTLNVGAYNSEVIRGAIEAVPKGQWEAAYSLSMTRAQVLSRTVLPQAARVAVPPLSNAFIALVKD
TSLAAVLTVPEIFQAAQRIAAVTYEPMILYTEAALIYLLFSSVLSALQTRLEKHFGQHAVFAEQQR
>AHV93764.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MKILYTNFHPRNGGGHVTYIINLARGLAADHDIVVATPPTSRLYRYAQSIERVRVAPMDFTTRLSSWFAGRQCLKRLIRQ
EKFDVIHCNGSADHKLVMLATLGMRHRPRIIFTKHNDHPLASLGNAVRARWATDHVIAVSDYVRKLVQASPYGRLPISTI
RHGVDTNFYAPPAPGSQDKLRALFFGEDWHGKLLLGSAGGTDFDKGWLDLVDAAGSLPPELRGRVRILVAGDPPNDVKLA
RVQAAGMQEQMVFPGLLDDVRAALASCHVGFVLSYREALSFACREMMAIGRPVLASDAGGLPENITVGRDGWIVPARDVP
AIAAALRGMLADPETLRRMGLAAREKAVREFNLQDFARATLDVYIRTLAER
>AHV93765.1 hypothetical protein D560_0732 [Bordetella holmesii ATCC 51541]
MTSSRLPSLDALRGFALLGIVVVNYQVFALPYLGSGLMAPGFDRPVDWLVQGLVALFFETKFYLLFSFLFGYSFVLQIDR
ARIEGADPVVRLRRRCLALMVVGLLHAVLLYQGDILLAYGVFGLVLLSCRDWPARRAWRVALGLVATGSALWLAVGLLAL
DQPWPRDALLAQIAGIEAAAAAYRSGVQQLIAQHWRDLTGDVWRTIFYVQGPNVLAMFLAGMALCKRQALTHAPAALLRG
WFGWDCLWAWQVPRFTRWALSRPGRRPGAWRGWVLDFSLRPCLRWGMARSFYWHAVNGRPFKKHSLRQAVWRCPTICCSR
WWGPGCTRRGGWR
>AHV93766.1 metallo-beta-lactamase superfamily protein [Bordetella holmesii ATCC 51541]
MQPQAFFDSTTGTISYVVHDGRVCAIIDPVLDYDPKSGRTSTAGADAIMAFIQTQGLQCQWILETHAHADHLSAARYLQH
HMGGKLAIGRSIQQVQAAFKPIFNLDLPADGSQFDHLFQPDETFAIGSLQARALHVPGHTPADMAYQIGDAVFVGDTLFM
PDVGTARCDFPGGDAALLYRSIRRLLALPPATRLFMCHDYPPDGRVAAWETTVAAQRATNIHVHDGVAEADFVAMRQKRD
ATLPMPTLILPAIQVNIRAGALPDPDDNGTRYLKIPLNRL
>AHV93767.1 enoyl-(Acyl carrier) reductase family protein [Bordetella holmesii ATCC 51541]
MAKAGLISLAQTLAIELGNDNIRVNAIAPGAVGGQRIENVLQGRASANGKTVEDERASMLSIQSIKSFVDPKDIAALCVF
LSSDAGKSITGQVIPIDNGALKAA
>AHV93768.1 snoaL-like polyketide cyclase family protein [Bordetella holmesii ATCC 51541]
MSDTSGQTVNRFLNALHAKDVPAALEQVSENAQITVFPMQIRKGPKLVIDTLLTDIVRAFPDVLITVRNVISVGNVAVAE
FKLEGTQSADFLGAINQEKHLDLDTAWRFTVEAGAITGIDAYWCQNQLYRRLAIKRQDHVTIV
>AHV93769.1 oligopeptide transporter, OPT family [Bordetella holmesii ATCC 51541]
MLTWHSLPAAGQSLADFGTQIWSSQVRFIGAGVIGVGAVWTLALLFLPMMRGMATLFGSMSAGGRPRGEVPRTERDLPGG
WIALLTLVLVAVLVVVFAYFIAATPVAQGRVWSLVTYAVLFAFVFGFLVAAACGYMAGLVGSSTSPISGVGIVAIVLVSL
LMVALHKEDGLLASAEGLRLATALAIFTTAAVIAVASIANDNLQDLKTGWLVGATPWRQQVALLIGCLVGAAVISPVLDL
LYNAYGFAGAMPRPDMDPDRALSAPQASLMLAIARGIFLRDLNWLMIVIGMGIGVTLIVVDELLKRCCEVARMPVLAVGI
GIYLPPTVSAPIVVGAILAWWLEKILRRRAQARGVQLAEDAAAARRRGVLLASGLIVGESLIGVFMAAVIGATQKDAPLA
LVGPGFSETAEWLGLVVFILVVIGFGRRVVGRGDLAS
>AHV93770.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MLGFVLRRLLATIAVLIMVAVVVFSILRFSPGDPAIIMAGDGATPERIEQIRQTMGLDQPLLKQFFIWGGNLLQGDMGTS
LMSGVPVRELIGQRLEPSLSLAVITLIFTLIIAIPLGVLAAWRRGKLLDRAVMGFSVLGFSVPVFVTGYLLIWAFAIKLG
WFNVQGYTPLAQGFGPTCTV
>AHV93771.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MLNYRHLYYFWAVAKEGGFARAAERLDMAIQTISAQVRELERSLGHQLLKPAGRGVTLTEAGEAAFARAEEIFQIGQQLS
DDVRAAATRPMMRLAIGLSDGISKLAVHALLGPVLDTPDLRLTCHDGEVNELLGELARHHLDLVLTGQGAPANPNLRLIS
ERLISSPVDWYGPARWVRRADVAAFPAVLARLPVLLPTGHSVLRQTLDRWFEAQGIVPQIVGEFEDSALMAVFAARGLGV
FPLSRMGGEDARLLNGLRPLGRCEEVREDIHAIRNRRGQQHPLVQRILAEAKTSVFS
>AHV93772.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MRRLRLPSGRRLAIVPPFVWLVVFLLVPFLLVLKISVAELQFGIPPYTPFAEIKDEAVQFSLHLRGYILLFTDSLYVATY
LNSVKMAAITTLCCILIGYPMAYYIARSAPRHRNLLLLGVILPFWTSLLLRVYAWVGILRNDGLLNKLLMGLGLTSAPLE
IYRTDLAVYIGMVYAYLPFFILPLYANLVKMDLRLLEAAYDLGARPWQAFWRITVPLSRPGVIAGAMLVFIPAVGEYVIP
EMLGGADTLMMGRVMWNEFFNNTDWPMASAVTCVMVLLLLVPLALFQYNQVKQQEAVNGGKA
>AHV93773.1 yceG-like family protein [Bordetella holmesii ATCC 51541]
MKKRFGFYFLLVLLVVTLAVGATVAGAWYWMNQPMRLAADRVDFVVDPGATPRAIARALNAAGVPVWEPGFVWMARLSER
DKQIKAGGYQAISGDTPWLLLERLARGDMSQRQVTFLEGWTFRQIRAALREHPDVKQTLGDVSDEALMDRLGAQIKHPEG
MFFPDTYVFTPGSTDFDILRRAYQEGQRVLASAWLKRDPDLPMATPYEALIMASIVEKETGHGPERARISGVFANRLRLG
MMLQTDPTVIYGMGENYQGRIRRRDLQTDTPWNTYTRPGLPPTPIAAAGRAALDAAVQPEKHKFLYFVSRGNGTSEFSAN
LSEHNRNVSRFILGQGQN
>AHV93774.1 hypothetical protein D560_3300 [Bordetella holmesii ATCC 51541]
MTERAGKPANPMPTRGTRARRLSRRNALESMLESLPASATGSGLT
>AHV93775.1 lipoprotein [Bordetella holmesii ATCC 51541]
MKLTLNTDGRYTLSRLYQDRQSKPELVSGRFHWLPGDGAIALEGDDSRWQLGENQLSMLDTEGKVITGPLAHHYILRRTA
H
>AHV93776.1 peptidase dimerization domain protein [Bordetella holmesii ATCC 51541]
MFDDVDTALTWHPGSFTGLFSQATLANIQVRFIFHGRAAHAGHSPHLGRSALDAVELMNVGVNYLREHMPTDARVHYAIT
DAGGLSPNVVQARAEVVYLIRARNNNEAADLYRRVRNIARGAELMTECRLEVVFEKACSNLMQNRTLNQVMYAQMQALGQ
LSVDAEQRRLAGEFQATLDASDVEQVSRPLASVLRGKVPSIFDGLVPYDPLADETLFGSTDVADVSWVTPTAQAWVACYA
FGTPLHSWQMVSQGQLGLAHAGMVHASRILAATGIALLDEPELMVQAQQELLERRGGQPYVCPIPADVPVPGRRAGVAAV
>AHV93777.1 2OG-Fe(II) oxygenase superfamily protein [Bordetella holmesii ATCC 51541]
MQTDLFADDHRIALGPQACLLRGWALPQAEAILAALTAIEANAPPRQMVTPGGLSMSVSMTNCGALGWTSDRQGYHYRRL
DPQSGKPWPPMPALLAQLASEAAAQAGFAAFRADACLINHYTPGARMSLHQDRNEQDFAAPIVSVSLGLPAIFLFGGLRR
DDRSARIVLQHGDVAVWGGVDRLRFHGVLPLADGRHPMVGRQRINLTLRHAGRPVK
>AHV93778.1 nitronate monooxygenase family protein [Bordetella holmesii ATCC 51541]
MPARDTAAPHPVVADLYGQMHLPVICSPMFIVSNPALVLAQCTSGVMGAFPALNARPQSLLADWLAEVQTGLADYRRAHP
HARVAPFAVNQIIHQSNDRLEQDLAECARHRVPYIITSLRAPGDLVAGVHAWGGRVFHDVTTIRHAEKALEAGVDGLILV
AAGAGGHAGTLSPFALLAEVRRFYDGPVALSGAIANGAGVLAALAMGADFAYMGTRFIASNQANASPAYKTALVQAQASD
ILYTPFFTGIPGNYLKSSIVNAGLDPANLPSPEHGASNFGSSRAKPWKDIWGAGQGVGSIASVQDAAHIVAQLRAEYEAA
RTRLDGRVFE
>AHV93779.1 ribbon-helix-helix, copG family protein [Bordetella holmesii ATCC 51541]
MKKYGLEKNKALKLAGQLRQAGTPGRFGSELPPDRREQRKLDQAAGLVPFALKLPQAQAERVRALAQERGVSTNDVVAEL
LQKALDA
>AHV93780.1 response regulator [Bordetella holmesii ATCC 51541]
MRILLVEDERDMASWLMRALAQSGFLPDHAPDARTAEGLMAGNEYDAIVMDLRLPDKHGLVLLREMRNRDDRTPVLLLTA
QGALQDRVRGLNLGADDFLTKPFALEELEARLTALVRRSRGRQHPRLQCGSLSYDGESRAFTLDGALLFLTPREHAALAA
LLTRSGYPVDKAQLFGKVFTHDSEANPDAIEVVLHRLRKKLAGSDVRIVTVRGLGYMLESVAREPTES
>AHV93781.1 ribosomal RNA small subunit methyltransferase B [Bordetella holmesii ATCC 51541]
MASASESGNLAPPLSAVLLSAAAAVQAVDEGRSLTDALADTEPGLRPATQAVSFHAMRYMGWADTIANRLVPREPAPLAG
ALLRVSLALLKEPDQPGQTVPGMPVYAPHTVVDQAVTAAASNPRLAGFKGLINGSLRRFLRERDTFAAELANDPVVRWNH
PQWWIKTLKQFYPQQWQTLLQAANVPAPLTLRINRRRASREQVIEAFTAAGIAARPTGEFGLVVLEPKPVTQLPGYSQGW
WSVQDAGAQLAAPLLPLADGMRVLDACAAPGGKTAHMLEIAQLDLVALDNDSRRLERVGQNLERLGLHGAQLLTGDAANP
RSWWDGRPFDAVLADVPCTASGIVRRHPDIRWLRRAPDVARTAALQARIADALWEVVAPGGHLLYVTCSIFPAEGQAQAR
AFAARHADAQALPSPGQLLPVAVNATPESQHDGFFYALFAKRP
>AHV93782.1 impB/mucB/samB family protein [Bordetella holmesii ATCC 51541]
MAKIASDWNKPDGLFVVRPSKVLAFLQPLPVRKVPDVGKVTQARLQALGIETVGELAAHGLADLEHHFGRYGRRLYELAR
GVDEREVQPDQPLQQVSSETTFERDLHLPQLEETLQPLALRVWEQARKKGQLGRTVVLKLKTDRFRILTRSHTLLQPPSS
AE
>AHV93783.1 bacterial transcriptional regulator family protein [Bordetella holmesii ATCC 51541]
MATANDGRRSIQSVEVGFPLLSALVDAARPLTLRDVAAAAGMTSAKAHPYLVSFIRVGLVQQDSVSGHYELGPFALQMGL
VSLQRLDPVRMALPEVAQFQADIGHTVGLAVLGSHGPTMVHITEASYPVHVNMRQGTVMSMLNTATGLVFATWLPPKVAE
HYIAREANDTAVTSTLATPLKAARPEHLQAMLADIRVHGMARAVGNPLPGVDALSVPVFDHAGKLVLAITTIGPSGLFDV
TWNGSIAQPLQRCAQEISRKLGWRA
>AHV93784.1 acetyltransferase domain protein [Bordetella holmesii ATCC 51541]
MDDAYRLQVDTPLESLDPEQWDELVGAHPTLSHAYFSALHDTGCAGPRTGWTPFFLTLQHAGKLAGAVPLYLKTHSRGEY
VFDHAWADAYERHGMRYYPKLLAAVPFTPVPGPRLLATDDTARAMLARGLVELASGLKLSSLHVLFAPEKDIAALRQAGC
LVREGVQFHWRNAGYADFESFLAGFNHDKRKKLRQDRKKAQAHGVHFQHIRGRDIGAAELDFFYACYERTYFEHGNSPYL
TRGFFERLHARHADSLVLVLALCQEQPLACALNLCGADALYGRYWGTMQFMPGLHFETCYMQAIEYCIAEGLDRFEGGAQ
GEHKMARGLLPTPTQSAHWIADPRFAAAIDDFLGRETEAVNEYRDTLARHTPLRRDD
>AHV93785.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MPADYLSIVGRSKDLIISGGFNVYPKEIESVIDDMPGVAESAVIGVPHPDFGEAVVAVVVPKPQATLDADAMQQELKARI
ANFKVPKRIYLVEQLPRNTMGKVQKNVLRESYQNP
>AHV93786.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MAMIRFEGVSLTYPLFDLQASFLRNQIAKWLSFGLLRHRGGQVRAIDALRDIDLEIVEGDRVGLYGHNGAGKSTLLRTMA
GVYQPQRGQVIVHGQAAMLFDIEAGLDPELSGRENVLNLGLIMGLPAAQCRALTPEVLAFSGLEDWRDVPVGVYSSGMRM
RLLFAVATAVTPEILLLDEWFSTGDAEFQEKSLGRLRQMMDRTHITVLASHDQHLLRRYCNRIFVLDSGRLQEVSTSSFA
SF
>AHV93787.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MQAAVVMVAVALLAFLLFQYVGDPVTIMLGQDATAAERSELRHRLGLDDPAPLQFARFIGNAVQGDFGISLRQSEPVSSL
IKSRLPATLELSIVAACLALVIGLPLGVYTALRRKGWLAQLVLAGSLLGVSLPTFLIGILLILVFSVHLGWLPSYGRGDT
VKLGWWSTGLLTASGWKHLILPAITLSLFQMTLVLRLVRSEMLEVLRADYIKFARARGLTRRAIHFGHALKNTMVPVITI
TGLQLGGIIAFAIVTETVFQWPGMGLLFIQAVQFADIPVMAAYLCLIVLIFVLINLVVDLLYFVVDPRLRAGLSRQAGGH
>AHV93788.1 putative dihydrolipoamide dehydrogenase [Bordetella holmesii ATCC 51541]
MKSLHTDIAVIGAGTAGLAAYRAARAAGKRAVIIEGGPYGTTCARVGCMPSKLLIAAAEAAHATRHTDAFGVRVAGPVTV
DGQAVMARVKRERDRFVGFVLQGVENLPAEDKLHGYARFLSDRVLRVDDHTEVHAERVVIATGSRPAVPAPFLALGDRLV
VNDDVFAWDSLPARVAVFGPGVIGLELGQALARLGVKVHVFGVSGSLGGISDPAVRQAARRIFQAEFYLDPDARVLETKR
VGDEVEIRYITLDNTERVERFDYALVAAGRKPNVDKLGLENTSLTLDARGVPQFDRSTMQVGSSAIFIAGDANADSPLLH
EAADEGRIAGENAAHYPQVTQSLRRAALAVVFSDPQIALIGTAHARLPRGSYVTGEVDFADQGRSRVMLKNRGLLHVYAE
IGSGRFLGAEMVGPGAEHIGHLLAWAVQQNMTITQMLEMPFYHPVIEEGLRTALRDAQARLVQAGAPRAA
>AHV93789.1 mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MQQIGADIDITRVSAIPLNIDVGMPVPGGEKRSNLSCVLVRIDTACGLSGCGFTAITEEEVVAAAIEHVAADALLGESAM
DSEKLWEKLYWLLTPRGQSGYASHAIAAIDIALWDLKAQRLDLPLWRLLGGARARVPVYATFGFNFLDREQLADAAAQWA
ARGFSRLKMTVGNHGLQRRDEPRPLADLIREDEARVRAVRERVGPDVELCIDANCGLDAYHARRLAQRLTDCDIAFFEEP
LAQNDVHALADLRRRAPMPLAAGQNEGLASRFADFFLAGALDIAQPNVAITGGYTQCLRIAGIAQACNVAIANGGAWPFH
NMHLHAGLAHGGFIEYHTVAVKVCEQLFDGLPQPQAGWLPLPDTPGLGFTPNWERIQDIARRPLSRGHGKH
>AHV93790.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MLLREIQELGYPGGVTQLKEFLSGYKHQEPEPVVRFETPPGKQMQADFTHIRRGRDPLMAFVATLGYSRSSWVRFTTDER
ADTWFGCLRQAFIYFGGVPQHVLFDNAGAIITERDAYGPGQHRWHNGLLAVAQEFGFTPRVCQPYRAKTKGKVERFNGYL
KGSFCVPLAAPLKQAGLRFDVTAANAHVGRWLTEVADQRLHGTTRERPAKRLQEERLALLQLPAQHGMLVPATSHRPVPR
ESFQHPLSVYNELLEVRA
>AHV93791.1 pirin family protein [Bordetella holmesii ATCC 51541]
MITIRPAAARGHANHGWLDTYHTFSFANYYDPAHMGFGPLRAINDDRIAAGRGFGTHGHRDMEIITYVLDGAVAHKDNMG
TGSTIRPGDVQRMSAGRGVLHSEFNPQPDAATHLLQIWIEPDVSGIAPEYEQKTFDAAEKRGALRQVASADGAQGSLRIH
QDVRLYAGLFDGDEQAELKLAAGRRAWVHVARGTLAVNGQALGAGDGMALEK
>AHV93792.1 DNA-directed RNA polymerase, beta' subunit [Bordetella holmesii ATCC 51541]
MKALLDLFKQVSQDEQFDAIKIGIASPEKIRSWSYGEVRKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKH
RGVICEKCGVEVTVAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAWCVIEPGMTPLKRGQIM
SDDDFLAKTEEYGDDFRALMGAEAVRELLRTIDIDREVETLHGELKATSSEAKIKKISKRLKVLEGFQKSGIKPDWMVME
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIILRNEKRMLQEAVDSLLDNGRRGKAMTGAN
KRQLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFIFNRLEMMGLATTIKAAKKL
VENQEPVVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEA
RTLMLASNNVLFPANGEPSIVPSQDIVLGLYYTTRERVNGRGEGIFFADVAEVQRAYDNGEVELQTRITVRLKEHERDEQ
GEWQPVIRRHETTVGRALLSEILPRGLPFTVLNKALKKKEISRLINQSFRRCGLRDTVIFADKLMQSGFRLATRGGISIA
MEDMLIPKAKEVILAEASREVKEIDKQYSSGLVTSQERYNNVVDIWGKAGDKVGKAMMEQLATEPVVNRHGEEVRQESFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRL
VDVTQDLVITEVDCGTSHGYSMKALVEGGEVIEPLRDRILGRVAAIDIVNPDSQETAITAGTLLDEDLVDLIDRIGVDEV
KVRTPLTCETRHGLCASCYGRDLGRGSPVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSALASAVETKSNGTVGF
ASTMRYVTNAKGERVAISRSGELAIYDDNGRERERHKIPYGATVLVGDGEAVKAGTRLATWDPLTRPIVSEYGGAVRFEN
IEEGVTVAKQVDEVTGLSTLVVITPKTRGGKIVMRPQIKLVNDNGEDVRIAGTDHAVNISFPVGALITVRDGQQVAVGEV
LARIPQESQKTRDITGGLPRVAELFEARSPKDAGMLAEVTGTVSFGKDTKGKQRLVITDLEGVSHEFLIPKEKQVLVHDG
QVVNKGEMIVDGPADPHDILRLQGIEKLATYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVNITDPGDADFIPGEQVE
RSELLNENDRVVADEKRPAHYNNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGT
GLAYHLARKDKEALEAAEREAARQQANPFEDAPVTAVIEADGPLTSDDETPAE
>AHV93793.1 hypothetical protein D560_2736 [Bordetella holmesii ATCC 51541]
MKPLRLSASLILLSLLAACGSSPPARYYTLQTPAPSATASAGNAGFMIEVLPVIVPAQADQPQIMLRTGEGSIVPLYSER
WSAPLGDELRAALSDGLTRDLGVLDVRVVRPPVGTPVWRVQADVQRFDVSERGQAVLDVTWRARPISVKGQALICRSIIA
LTAPGTDIPHLVVAQQQAAALLARTIASGIRQAGQNAEPAGPQVIMQGCTTLSEAAVLPEG
>AHV93794.1 ribosomal S14p/S29e family protein [Bordetella holmesii ATCC 51541]
MAKLSLINRDIKRAKLADKFAARRAELKAIIDDQSKTDEERYQARLKLQQLPRNANPTRQRNRCVVTGRPRGVFRKFGLT
RHKLREMAMKGEVPGMTKASW
>AHV93795.1 aluminum resistance family protein [Bordetella holmesii ATCC 51541]
MHQNGFTTTILHSDRTQAVEHGAVHKPMHPSSEFAYEDSRELAAVFQGKAGFTYARQGTPTTTALEAKISQMERGKGTVS
FATGMAALAAIFTTLLRRGDHLISSQYIFGNTNSLLGTLVELGVEVTAVDATDAEQVRAAVRPNTRMVFTETIANPGTQI
ADLAAIGTICRELGLVYVVDNTLTSPWLFQPCEVGASLVMNSLSKYIGGHGHALGGSVTDTGLFDWSGYDNIFESYRKGA
PTSWGLTQIKKKGLRDMGGTLAAEPAHRIAIGAETLALRMDRHCSNALALARLLDSHPGVAKVHYPGLAAHPQHDRAGSL
FRDGRYGGLLGVELADGIDCFDFLNRLNIVLNATHLGDTRSLALPAAHTIYYEMGAERRAQMGIADSLIRVSVGIEDEAD
LLLDFDQALKESMA
>AHV93796.1 N-carbamoyl-L-amino acid hydrolase [Bordetella holmesii ATCC 51541]
MSTTVFPPIDADRLWSRIETLSRMTVPGQPWTRRAFTPLFDQARTWLRAEFDAAGLSSHIDAAGNLVGRMSGRNAEKKKP
LVTGSHCDTVLEGGRFDGIIGVLAGIEVAHTLKDHGLRLDHPFEVIDFLSEEPSDYGISCVGSRAISGHLTADMLAACNP
DGETLAQGIVRAGGRPDALGQALRGPDTSAAFVELHIEQGPVLQARGLPIGVVSNIVGIRRTRIVVLGQPDHAGTTPMDI
RRDALVGAARIIDAAHHRATDLAGRPHYVVATVGRLTLTPNAANAVPGRVDMTLEVRSDSNAVLDSFTQAVLQTVTPELA
ALRLTVQAEPLSRAEPTDCARLVMEAVRTAADSLGYDTMTLPSGAGHDAMYMAPTGPMGMIFIPCLDGRSHCPQEWITPE
QLLDGTRVLYQTLLELDTLA
>AHV93797.1 flagellar transcriptional activator family protein [Bordetella holmesii ATCC 51541]
MNTADSSLLADIREVNLSYLLLAQRMLREDYAASMFRLGFSNEVADILMRLSPAQLVKLASSSSVLCRFRFDDYSLLSAL
TQDVLGGALQQAHATILLAKQPVEEIA
>AHV93798.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MLFTRRRFNLFLGLAIAAQGAVPALVFGKSAGTVTEYANEPAVLTQIDRNGPEAIGAKILEGLVDHDADLKLVPALAVSW
EQSPDALRHTFHLRTGVKWHDGKPFSSADVAYSILTLKKVHPRRKSTFANLVDVETPDA
>AHV93799.1 malonyl CoA-acyl carrier protein transacylase [Bordetella holmesii ATCC 51541]
MMDAWAGNAAVADVLARASQALGQDLAALIAQGPADQLNLTTNTQPAMLAAGVACFAAWRDAGGPLPAVMAGHSLGEYAA
LTAAQSLALEDAVRLVRIRADAMQAAVPVGTGAMAAILGLDDDAVRAACAQGAQGEAVEAVNFNAPAQVVIAGHKAAVER
ACEAAKAAGAKRALLLPVSAPFHSSLLKPAAEVLAKALADAAVHSPAVPVINNVDVALPSDPAAIRNALVRQAWHAVRWV
ETVQAMKAQGVTHVIEFGPGKVLTGLTKRIDGDLTGLAVTDPASLDAALALVKGN
>AHV93800.1 wbmB domain protein [Bordetella holmesii ATCC 51541]
MAKKIAAQADAWRRLGHHVQHFVLAPAESVDSPNVSRILSSGVRPPILAAALSGRSIGKALSQWQPDIVYLRQMLWWPGR
>AHV93801.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MPDLLQLEHIALGYDTPQGIKRVVDDLSLSLAADQIGCLLGESGCGKTTVLRAIAGFEPLRAGRILLDGRVLSAPGEQVV
PERRNVGMMFQDYALFPHLTVSQNVAFGLRRLPKDRQRIRIGEMLELVGLAHAAQSYPHEISGGQQQRVALARALAPSPG
LLLLDEPFSNLDVDTRERLAFEVREILKATGHTAILVTHNQAEAFAIADRIGIMDKGRIAQWDTPYNLHHAPASDFVRDY
IRRETLQEQREAAYARGR
>AHV93802.1 hypothetical protein D560_0852 [Bordetella holmesii ATCC 51541]
MTYDAGKALNAAAKARGEHGYAAQWAGQAAALSRGLPAAQLVAALAQEWRDQGSA
>AHV93803.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MRKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMR
GLPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNT
DRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93804.1 short chain fatty acid transporter family protein [Bordetella holmesii ATCC 51541]
MNKLASFFTELMRKYLSDPFVFAIGLTLLTVVLAFAVEGQGLPQITREWGSGFWSLLAFTTQMAVILAMGYVLATAPLTD
RLLNRIVSHVHNPRTAIIIATLVGGIGSYLNWGFGLVIGGIVAKKLALKVKGVHYPLIIAAAYSGFTLYGLGFSASIPVL
VATPGHPMAKAMGVIPLSETIFSVPMLLTSLVVIITLPLLNAWLHPKAGEKIVEVDPDIDKASENTSSAHSIGGENTLAT
RLNNSRVLSMLIGILGIAYVVFYFADGKSLDLNLINFIILFLGIILLGSPAAYVAKLNEGIKTISGIILQYPFYAGIMAI
MAGSGLVTTISEVFVDVATPGSLPFWGLVGSFVINFFAPSAGGHWVIQGPFMIDAAKEIGSALNQTTMSVMLGNAWNDLI
QPFWILPALALSKLKLRDVMGYTVIMMIWVGAIYITAVLAWGYMTH
>AHV93805.1 snoaL-like domain protein [Bordetella holmesii ATCC 51541]
MQIWADDEEVVCIHPGGLRIVGHSAVHESWQQVLTNGPLRIRPLRPVVVQSMMCAVHVLVEQVTVQTREGTQFANCYATN
IYHKGPTGWRMVMHHASQAPAEAGVLDLHDVPDRLH
>AHV93806.1 putative glycosyltransferase domain protein [Bordetella holmesii ATCC 51541]
MSDPPLRARLGAEAVSVRERFSARHVLSLWQKLFDDALGRSST
>AHV93807.1 2-methylcitrate dehydratase [Bordetella holmesii ATCC 51541]
MIGYDIQSPLALDTARNCLIDTLGCGLEALEYPACKKLLGPIVPGTLVPHGARVPGTSLQLDPVQAAFSIGAMIRWLDFN
DTWLAAEWGHPSDNLGAILATADWLSRTGVAAGKPALVMRDVLLAMIKAHEIQGCLALENAFNKVGLDHVVLVKVASTAV
VSRMLGLSRDEIINAISLAWVDGQSLRTYRHAPNTGSRKSWAAGDATSRAVRLALIARTGEMGYSTVLTAKIWGFYDVLL
KGQPLRLQRPYGSYVMENILFKISYPAEFHAQTAVEYAMQIHRQLESMGRSAQDIKQITIRTHEACLRIIDKTGPLHNPA
DRDHCIQYMVAVPLLFGRLTAADYEDSAAADPRIDALRARITCVEDATFTRDYHDPDKRSIANALSVELDDGSKLPEVIC
EYPLGHRRRRAEGIPLLEEKFRRNLARMLPARQQQRILEVSLDAQQLHPMPVHEYVDLYVI
>AHV93808.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MFVSMSSRVRRRSLSLLACTAAAAIASAGWGKAHAEQAYPVKPIKLVVPFAPGGSTDIVVRVVAEGMRGPLGQSVIVENK
AGAGSLLGTENIAQAAPDGYTIGMSTVSTATVNPGLFTRAAKLEGKLQPVAKLVSMPSVYMTNPQMGATDFQTFLGKTKE
QPGQYSAAVPGLGSLGHLMMAALNDALKIDLEIVPYRGSGPALNDVLGGTVQVMADQLPSAMPHIKGGKLVPFALAAEER
SADLPTVPTFKELGYPELNDLGMSWFGLVVPAGTPQPVVRRLQDAALESVRSPAVQERLKSLGAVAVTMDQAQFPAQIAA
ELQRNKALLNKLNVKPE
>AHV93809.1 ribosome recycling factor [Bordetella holmesii ATCC 51541]
MSLADIRKSAETRMSKSLDTLKTNLAKIRTGRAHTGILDHVQVEYYGSPVPVGQVANVNLIDARTISVQPYEKHMGSAIE
KAIRDSDLGLNPVSMGDSIRVPMPALTEERRRDLTKVVRSEGEDAKVAIRNLRREANEGLKKLVKDKEISEDDERRAQDD
VQKLTDRAVADIDKMVTQKEAEIMTV
>AHV93810.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MNMTACENVMLGAHLRQHAGLLAGLFGWTRAADRRLAQDALGWMEMAGVGAYAAHHASQLSFGVLKRLEIARALASEPRL
LLLDEPAAGLNDSETAELTRLIRRIADSGITILLVEHDMRLVMEVSNRILVLDHGRRLAEGSAQEIRADEKVIQAYLGAE
DVSHAE
>AHV93811.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MLLTFSRNEVHPAGAGVPQSERFGAMVAVMLAVCMASLDTAIANTALPTIAREINATESASIWVISAYQLAMVAALLPAA
AMGDVFGHRRVYLVGLIVFILSSLACGLAPSLPVLVAARILQGLGAAGLMGINGALVRFIYPSHALGRGVGTNALVVGLS
FAAGPTLASLILVYGSWHWLFLINVPVGVVALVLALRGLPATARSGHRFEWRAGLLCAGFLSFLVLGLTEAGHYVPVWRV
ASELAIAAFCLVLLLYRQAGHPAPILAVDLLRRPVFALSAATAVCAFATQALAFVSLPFMLQQVLGYTQVETGFLITPWP
VVVAVMALIAGRMSDHYPAGLLGGAGLAVLALGMLSLATMSAQPTAWDIGWRMALCGAGFGFFQSPNLRAIIGAAPPGRA
GGASGMVGTVRLLGQSSGAALVAACLHLAGVGGTAWALWLGVLFAALASIASFARLRFAD
>AHV93812.1 histone H1-like nucleoHC2 family protein [Bordetella holmesii ATCC 51541]
MATAKKAAKKAVKKPAAKKVAAKKPAAKKVAAKKPAAKKAVAKKAVAKKAVAKKAVAKKAPAKKAVAKKAVAKKAVAKKA
VAKKAVAKKAPAKKAAAKKPAAKKPAAKKAAPKKPATPPSTTAAPGAKTVLNPAASWPFPTGGRP
>AHV93813.1 thiazole synthase [Bordetella holmesii ATCC 51541]
MGTGKYKDFEQTRAALDASGAQIVTVAIRRTNIGQNPGEPSLLDYVPPSRFTLLPNTAGCYTAEDAVRTLRLARELLDGH
DLVKLEVLGDPTNLFPNMPETLKAAKTLIDDGFKVMVYCTDDPIQCRMLEDLGVCAIMPLASLIGSGMGIINPWNLRLII
DQTQLPVIVDAGVGTASDATIAMEMGCDAVLMNTAIAGAQDPVLMASAMNKGVQAGREAFLAGRVPRKLYSGAPSSPTEG
MIAAAK
>AHV93814.1 hypothetical protein D560_2848 [Bordetella holmesii ATCC 51541]
MTVRGQTAIRGISHRTRTDLDFSQCSAHWGCDKMTQAERRQAGMCGLQAYQQGLMAGIAASRGCDNMTQPKFASWCGSAT
RSWNRAPDRAFS
>AHV93815.1 transcriptional regulator [Bordetella holmesii ATCC 51541]
MTEALTFRRASAGDLPAIVALLSDDALGHSREDASQPPNLAYVRAFEAIDLDPNQLLAVAQRDGRVIGCMQISFIPGLSR
LGAWRGQIESVRVAHSERGAGTGRLFFEWAIEQCRQRGCALVQLTTDKQRADAQRFYLALGFHATHEGMKLALQ
>AHV93816.1 glycosyltransferase family 28 C-terminal domain protein [Bordetella holmesii ATCC 51541]
MVIHEQNAVAGTANRWLARMANRVLTGFPNVLPGADDVGNPVRADVCKLPAPALRYAERQGPLRVLVVGGSLGAQALNTV
VPQALARIAPQQRPVVVHQAGAQHLQALQSAYAQAGVQAECLPFIEDMAGALANSDLLICRSGAMTVAEVAAAGVAALFV
PFPHAIDDHQTTNARYLSEVQAAWLQAQNALTPEWLAGWLGQRNRPELQAVAERARAQARPDAAEHIADVCMAAARRRS
>AHV93817.1 flagellar hook-length control FliK family protein [Bordetella holmesii ATCC 51541]
MSIGPPALGNVLVQRLDAVLGTTMAAHANTLTGARPDAVGQPGQAARTGQTDDATRDPRGQIDGAGGKADRQAAAVDAKT
AAALALAARGLVTRNDTTASAPTTLGNTARIILSLLAQYPNAAPAVQSASALWTPPQAAENAAGGAAREPSVSAPRISQP
ETDQPRESGAKPAPAASGVQGPPASSQPAAALFAQALKASLQTSGLFYESHLTEMVYGQRTPQTLRDEPQANLPAAPAYS
APAASPAPAHTAQASASAVLTLSAEADTARAQDPGAPIGGLHSQTNTLVRQQLEILANNAVYWSSRLVLHLPRLGEIDVR
LSLAGSQLVLQLTAPQSATELKHEAKTLRQQLSGAGLTLSDLSVQAVDPERFQTTDFLLSDA
>AHV93818.1 hypothetical protein D560_2794 [Bordetella holmesii ATCC 51541]
MTQQNTTDREPTDYFGLDIPLMDYMGLIPESISEGVARCRLPCRRELTNSRGHVHGGTMMSVLDFTLSAAARGNQVQVGM
ATIDMTTSFLAPGLGDLVVEARCLRKGGSIAFCEGEIRDEKGQLVAKASATFKLVMQRPGSD
>AHV93819.1 alpha/beta hydrolase family protein [Bordetella holmesii ATCC 51541]
MAGLSLSIEPADALIDVPRRIVVRGAQPGAEVSLQTATSRAGVTWRAQASFVADAQGSVDTTRDAPIRGSYEGVSPMGLI
WSQAPEVAGRRETFNQPVTEALATEVLASTQDMHASGHFVQRLAAAGVTRREVREDGLVGTLYLPAGEGPHPAIMILNGS
GGGINEPRAALYASHGYAAFALGYFKAPGLSDYISNTPLEYFQRGLQWLRREVRPAHDFVALSGQSRGGELVLLLGATFA
KDVSAVIAYVPGAVVHSGQNAADPKVGREGPTWLLEGKALPHVWENNRTASWKPFDDGPAPPRHELAFLTALQDPDAVAR
ARIPVERIQGPVMLLSATDDGSWPSSLYSRMVRDKLTETGQPHDVRWLDFENGGHLIVFPYVPTTQMVYAHPVSGKISTS
GGNPRDNAHADEASWAGVLQFLRGAVAAKAQGDTQ
>AHV93820.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MHKHAKRLLALAVLSIATSASAQSWPTQPIRWIVPYPAGGGADVVARSVASGLEKPLGQTIVVENRPGAATIIGATAIAQ
AEPNGYMVGTADTGTLAFNPSLYSKLSYDPSKFSYVGGIARFPLLLAVNANSPFKTVEDVLQAARKEPGKLTAASAGAGS
PHHLALELFKQRAHVNLLHVPYKGAAPAIQDLLGGQVDVMFIDLAAGLPNVKAGKLRVLAAATPERLKALPDAPTMAEQG
VPDFTAYAWQGLVAPAGLPQPVKDKLSAELEKTIRSPAVSQKLNDMGVEPMPMSPKEFQAYAERERATWAEVIKKANIHL
E
>AHV93821.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MGDDFPDIRDSVRRICDSFPGEDWRALEQDERYPDEFVAALTASGFLAALIPEEYEGSGMPLRAAAVILEEIHAAGCNAG
ACHAQIYTMGTLLRHGSPEQKARYLPAIARGELRLQAFGVTEPTSGTDTTRLKTRAVKDGDSYIVNGQKVWTSRALQSDL
MLLLARTTPYDDVQKKSDGLSVFLVDIRAALGNGMDIRPLKAMVNHNTTEVFFDNLRIPASSLIGQEGKGFRYILDGMNA
ERILVASEAIGDARWFIRTAVAYANDRRVFDRPIGQNQGIQFPIARAHAETQAADLMLRKAATLFEAGLPCGDEANMGKM
LASEASWHAAEACLQTHGGFGFAREYDVERKWRETRLLQIAPISTNLILSYIGQHMLGMPRSF
>AHV93822.1 amidase family protein [Bordetella holmesii ATCC 51541]
MSWQSLCEMTAVQMRAQIAAGQLSAREVTDAHLAAIGQRNPAVNAIVTLDEQAAREQAQAADDAQARGAELGLLHGLPVA
HKDCFLTEGMRTTWGSPVHRDFVPAQSSLIVRRQRAAGAITLGKTNMPEFGAGSQTFNPVFGATRNPYDSALTAGGSSGG
AAAALACRMLPLADGTDMGGSLRNPASFCNVVGLRPSPGRVPQ
>AHV93823.1 ribulose-phosphate 3-epimerase [Bordetella holmesii ATCC 51541]
MSVPASTRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPMVCAAIRPHVQVPIDVHLMVEPVDEIV
PLFAKAGADIITFHPEASRHVDRTLGLIRDNGCKAGLVFNPATPLSYMDYVMDKIDVVLLMSVNPGFGGQAFIPATLAKL
RQARARIDAWTQAGGQPILLEVDGGVKTDNIAEIRRAGADTFVAGSAIFGKPDYTAVIKALREEIARGETLSA
>AHV93824.1 multi-copper polyphenol oxidoreductase laccase family protein [Bordetella holmesii ATCC 51541]
MGHVIAGLPVVSGQTWPGVTYFCTTRQGGVGKAPHDTLNLGIRAGDDPDVVAENRRRLAVALPAEPRWLRQVHANAVHDA
DQPRPDGEIAADASVTTRAGQVLAVMVADCLPVLLADDEGQVLGAAHAGWRGCRVACWKTPWR
>AHV93825.1 acyl carrier protein [Bordetella holmesii ATCC 51541]
MESIEQRVKKIVAEQLGVNEAEIKNESSFLDDLGADSLDMVELVMALEDEFETEIPDEEAEKITTVQQAIDYINSNGKQ
>AHV93826.1 coA binding domain protein [Bordetella holmesii ATCC 51541]
MTAVTQRPGAGLEYFFDAQGIAVIGASDDITKIGGRPVHMLIKYGYAGPVYPINPKGGTVQGLPAYANVRDTPTVPQLAI
LAVPASATAAALRDCATRGVKAAIVLSSGFVEAGPQGAALQAELVQIGRDHDMRILGPNCLGAVNVADRLIGSFSIALEE
NMPAAGHVGIVSQSGNVGSHTMQSVARRGMGVSRFIATGNEADVDVADGIAALAQDPSTRIILCCMETCRHAGKLIDALR
MARDLGKPVIVLKIGSTEKGQAAAASHTGALTGSDAVIDAIFRRHGVLRVRSVEALIDIGHAASLLMPNRLPRTDAVTLV
AASGGFGIMMADAMSEAGMVLPALAEHTQQRIREAVPTASTGNPVDASAQMSSRPDILLKMLTALLDDPAEGALVLFMSL
SLYNTRLRGIYLQALAEVRASHPDRLLMIISQGPADAVEQITALGIPVFASIDSAATGLAGLLQLGRLQAGAPAPASMAP
AEPVDTTVFRNEFEAKRALARAGIDVPQEIIAHNADDAARAADAIGYPVVVKVVSEDIAHKTEAGGVALNLTDAVSLRQA
YAQVLSNAARHAPQARIDGVLVAPMLRGGTELIAGISQDPVFGPIVMVGMGGIYAEVLKDVAVQAVPVSEHEALEMIRSL
KMFAILDGARGQAKADIETAARTVARLSAFAYRHRDDIAEIDMNPILVRPQGQGVVVLDALMVPRTHPVP
>AHV93827.1 hypothetical protein D560_0080 [Bordetella holmesii ATCC 51541]
MASIGHGNHMPIAPPFVEHDDLMPSASQTRRYIELTLRQRRGQAPGQ
>AHV93828.1 transcriptional regulator OhrR [Bordetella holmesii ATCC 51541]
MLDDQLCFALHSTALAMNKIYRKLLGELGLTYSQYLVMMVLWEQDGLTLSDIGKRLFLDSATLTPLLKRLEAAGLLRRDR
GVADERQIIVSLTAPGQALKAKAAAVPTGIAEALHCSAEQAQALKTRLECLRAQLT
>AHV93829.1 spoU rRNA Methylase family protein [Bordetella holmesii ATCC 51541]
MKLITSRENPAVKALHRLAEQAGRRGAPVLLEGVHLCQAWLARHGAPQQAVFDAERLDQPELADLARRVPQDVSLALDSR
LMRGLGSVEGDQGVAFVVRAPDVALPETIRANCVWLDRIQDPGNVGTLLRTCAAAGIRQAFLATGSAAAWSPKVLRSGQG
AHFALEIHEHVDLHALSSRLRIPMAVTTLEQSQDLFATALPSALAWVFGHEGQGVDAALQARAELRLRIAHDTHAVESLN
VGAAAAICLFEQRRQGNFA
>AHV93830.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MHAQPLYQRLAEYYRAAIQSGALPPAARIPSVRTMVRTHQVSLSTALQVCRRLEDDGLVEARPRSGYFVRRNAAPRLAPA
TEPDMRAAADPAQYVGIHDRVSNFVALCEQHTLSINFALAAAEPAAYPHHALRQAMSRALRLNPELLTSRAPPRGAEPLR
RVLARRAMDCGIRATSDDIVVTHGCIEALNLALRAIAQPGDTIAVESPTYFGLLQILESLGLRALEIPTSPQRGLSVEAL
ELALRTQPGIRAVVVVPNLQNPLGCVMPDADKQRLLHVCVESGIALIEDDTYGALADGGPQRAIKHWDAAGNVIYCSSLH
KTLAPGMRLGWIMGGRWHARIDMIKFAQSRPNEAAGQLAAAAYMATKAFDRHLVRLRGQLTRQRQHAADTIAREFPPGTR
LNLPPGGMLLWVELPQGVCGTAVFEAALQAGIRVAPGTMFSNSGRYDHYLRLSCAEADPRKAEQAIAKLAMIVISLQK
>AHV93831.1 hypothetical protein D560_1640 [Bordetella holmesii ATCC 51541]
MNTYIGVCTRTLWLAGLGLSMAAGQAFAADAFPSRPVRIIVGSEAGSAPD
>AHV93832.1 formate dehydrogenase, beta subunit [Bordetella holmesii ATCC 51541]
MSMQSLDIKRRSATTTPAPGVREPSTGSVAKLIDVSKCIGCKACQVACMEWNDLRDEIGVNVGVYDNPADLTEHSWTVMR
FSEYENDKGDLEWLIRKDGCMHCEDPGCLKACPSPGAIVQYNNGIVDFHEENCIGCGYCITGCPFNVPRISEKDHKAYKC
TLCSDRVAVGQEPACVKTCPTGAIEFGTKEDMKQQAAERIEDLKSRGFENAGLYDPQGVGGTHVMYVLHHADQPQLYHGL
PKDPKISPMVSLWKGIAKPLGVAAMALTALAGFMHYIRVGPNETDEEDERKAEEEARHG
>AHV93833.1 hypothetical protein D560_2380 [Bordetella holmesii ATCC 51541]
MLRKFEQGRNKRSHKFYRWFNEVPVLLLVAVVALVVLKPF
>AHV93834.1 voltage gated chloride channel family protein [Bordetella holmesii ATCC 51541]
MLSMLLHAVQHLAFGYSLDDLFFSHRAFLYGVMAATPERRVMALIACGLVAGLGWGALYRWGRPLVSVKATLSDDAPPMP
PGATLAHAILQIITVGLGSPLGREAAPREAAAMLASGLARHARLNAEQRRILVACAAGAGLAAVYNVPLAGAVFALEGLL
ATFCWQAALIALATSAIAAAVAWLGLGMGLQYVIGPLEIHPSILVWAMLAGPIIGAVAHAFSRMTDQAKLRAQSLSGWPL
IVLALLNFTAIGLLSVYFPALLGNGKGPAQLGFDSALTLGMAAVLLCLKMLVSACALRVRASGGLLTPGMACGALLATLL
GGVWNLLWPGAPLGAYAVIGAAAFLGTSMHLPFTAIVLVMEFTQVNHNFVVPIALAVAGALATARLLDHD
>AHV93835.1 phosphoglucose isomerase family protein [Bordetella holmesii ATCC 51541]
MHEASHRGDHLRVLEAAGLSVDLTAQAYSASLDAAALALCEQQGLTRAIQQLFDGGEANWTEHRPAWHTALRAAQPPASV
AQAILTERQRVRDFVAAANANGDYKYVLHLGIGGSDWGRA
>AHV93836.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bordetella holmesii ATCC 51541]
MPINVPIFLTWLRIAMIPLVVGLFYLPDTWISVSVRDTLAAVAFIVAALTDWFDGWLARRWNQTSAFGAFLDPVADKLMV
CAALIVLLDLSRVDAFVSLIIIGREITISALREWMAKIGASASVAVHRLGKFKTAAQMVAIPCLLYNQTLWGVDMRYVGA
WLIVVAAVLTVWSMLYYLQRAWPAIREKAG
>AHV93837.1 ppx/GppA phosphatase family protein [Bordetella holmesii ATCC 51541]
MDHLLAAVDLGSNSFRLSIGRVVQQDGVAQIYQIDRLKETVRLAAGLGQDKILGPDAIDRAVGVLERFGERLRSFHPNRV
RAVATNTFRVARNTPDFLPRAEAALGFPIEVIAGREEARLIFTGVAHSLPPSPNKRLVIDIGGGSTEVIIGKGLDPNLMS
SLYMGCVSYSRQFFPDGRVDGSGMKQAEIAARREIEVIAKQYRRMGWKEVYGSSGTAKALFAILTECGFAKAITAAGMAK
LKDRIIRSGKVVPSELPGIKLERADVLPGGLAIMSALFDELGIDTMYTGDGALRLGCSTI
>AHV93838.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93839.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MIAQPITAVDENQRRWRGAVLPAALILLWWAASQAGVVNSALLVSPAKVLETAADQIFTGKLWRALGASLARELTGFVIG
TTSGLVLGALLGVSRVFNRLVGPSFNTFKQISLFAWIPLISVWFGLGDIAKVVFLSLAALVPVVVNTCDGIRSTPPALLE
VARVYGYTRRQTFLYVVLPAATPAIFTGIYLALIYSWLATIGAEYLLVAGVGIGNLLIEGSEHFQMDLVIFGMFVVGLVG
WLLNALARSIERRLAFLRGAAQ
>AHV93840.1 type II secretion system (T2SS), F family protein [Bordetella holmesii ATCC 51541]
MMTPLLALLLAMVSAGLLAWQIQRNVEPAWQRYRDTYMHDARLGLQEVFLFFDPQQLWGMAMACACLASGLLLLAGAPLA
MVGLGAGLGWRLPALLLERLRKRRLQRLQAQLPAALLSLAAALKAGASLPIALRQLANLSQAPLSQELGLMLREQRIGVA
FDDALRRLEQRADLPAVHLLAAAFRVAGTSGGNLAQALEGIAHALRGNCWPRAGCARSRRKGACKPGCSVRCPWCWGWYF
ICCARSKWRCCDNRKPDGLCWPSSSACRRLGGC
>AHV93841.1 hypothetical protein D560_1490 [Bordetella holmesii ATCC 51541]
MFDILVYLFENYYTPQACPAADVLAKRLAAAGFEHEDIDDALGWLYGLAETTERCVDLAHTSATGFRVYTDAEYQQLGTA
SIGFITFLESAGVLPAPLREIVIDRALASPEAPVSLSKIKIIALMVLWSQEAEIDNLVLEELLDDEENHRLH
>AHV93842.1 hypothetical protein D560_3800 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSP
>AHV93843.1 hypothetical protein D560_2862 [Bordetella holmesii ATCC 51541]
MSSFDVVSEVDKHELTNAVDQANRELSTRFDFKGANAKFELEGYVVNQIASSTFQLKQMLDILRGRLSARNIDVRCLEED
APLENLGGARQKVTVKQGIEQATAKKLVAAIKASKVKVESQINGDKLRITGKKRDDLQAVMQLLRKTDVDLPLQFDNFRD
>AHV93844.1 transcription termination factor NusA [Bordetella holmesii ATCC 51541]
MSREILLLVDALAREKNVTREVVFGALESALASAMKKRFKEDADIRVSIDRETGNHEGFRRWLVVPDEAGLQEPDKQEML
SDAREIAPDLQEGDYIEEPLEPVEFGRIGAQAAKQAILQKIRDAEREQVLNDFLDRGETIISGTIKRMDKGDCIVETGKI
EARLPRTEMIPKENLRVGDRVRAFVLRVDHAARGQQVILSRTSPEFIRQLFENEVPEIEQGLLEIKAAARDPGVRAKIAV
VAYDKRIDPIGTCVGMRGSRVTAVRNELGGEQVDIVLWSEDPAQFVIGALAPANVESIVVDEDKHAMDVVVDEENLPKAI
GARGQNVRLASELTGWQINIMTPEESLNRQENERATLRAAFMDKLDVDEEVADILIDEGFTGLEEIAYVPMQELLEIEAF
DEDTINELRARARNALLTEAIAQEERLETAQDLLELDGITPDLAAKLAERGVHTRDDLAELATDELAEIAGMDEQQASDL
IMRARAHWFDEE
>AHV93845.1 htrA suppressor protein [Bordetella holmesii ATCC 51541]
MSATLEAQSTLTDRYQTTVPETVRRALRLGKRDKIHYSIRPSGEVVLTRAEMSEGDDPVLGQFLSFLARDIASHPERLQS
VDAALVQRLQSLVGGVEVDLDAVLSAGDE
>AHV93846.1 peptide chain release factor 1 [Bordetella holmesii ATCC 51541]
MKSSMRGRLEQLAHRLIEVDALLADPETAGNMDRFRKLSRERAELEPVVVAFTAFEGTEADLATAQEMLSDPEMKAMAED
EIKAARERLEVLEGELQLLLLPRDPNDGRSLFLEIRAGTGGDESALFSGDLLRMYSRYAENRGWRVEIMSESPSELGGYK
EVIARIDGDGAYGRLKFESGVHRVQRVPATEAQDRIHTSACTVAVMPEADEMNEIVINPADLRIDTFRASGAGGQHINKT
DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGSGDRSERIRTYNYPQGRVTDH
RINLTLYKLQHILEGDLDELTGALLAEHQAEQLAALGDAI
>AHV93847.1 hypothetical protein D560_0678 [Bordetella holmesii ATCC 51541]
MLSSPSYPMPQTRTASPLGERCRLVDLAAQKAAASLLAELAEGVATTDGMLAHLPIDLRQGRPDSYTRHIAYADPHGRYT
IAYLI
>AHV93848.1 flagellar FliT family protein [Bordetella holmesii ATCC 51541]
MTALMQQAPVLDLYQDIASVTGEMLVFAQDEDWTQVLDLGRQYIELVEQLRGLEPASPLDDASRAMKYELLVRILENDAA
VRDLALPQLARLGDLLGRMKRQQSLLATYGGKARSA
>AHV93849.1 tripartite tricarboxylate transporter TctA family protein [Bordetella holmesii ATCC 51541]
MELLDNLLLGFSVAISPENLAYALLGCILGTLIGVLPGIGPVPTIAMLLPITYVLPPVAGLIMLAGIYYGAQYGGSTTAI
LVALPGETSAVVTVLDGHQMARNGRAGSALAIAALGSFFAGCVATLLLAAFAPPLAEVAFKFGPAEYFSLMVLGLVGAVV
LASGSLPKAIAMIILGLLLGMVGTDVNSGVARFDFGVPELQDGIDFAIVAMGVFGFSEIMNNLEQKENRVDITDKIGSLY
PNKQEFKEAAPAVLRGTALGSALGILPGGGAVLSSFASYTLEKKISKNPERFGKGHPAGLAGPESANNAAAQTSFIPLLT
LGIPGNAVMALMVGAMTIHNIQPGPQVMSSHPELFWGLIASMWIGNLMLVILNLPLIGLWVKLLKVPYRVLFPAILVFCT
IGVYSLNYNSFDIFMTAAFGVVGYVWSKLKCEGAPLLLGLVLGPMMEENFRRALLLSRGDFSTFITRPLSASLLALALAL
VVVVALPAIRKKREETFVEED
>AHV93850.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MGVQIAAHLANAGIPVTLYDLTAKEGPRNGVVERALAGLKKLEPAPLARPDRLALISAANYDDDLPSLAQCDLVIEAIAE
RLDWKTELYHRIAPHVSPQAILASNTSGLSINSLADALPDALRSRFCGVHFFNPPRYMRLVEVIATAHTRPDVLDHLETW
LTSRLGKGVIRALDTPNFVANRIGVFSILAAMHHTQRLGLSFDEVDALTGPRLGRPKSATYRTADVVGLDTLAHVVGTMR
DQLPQDPWHAYFTVPAWLQTLIEHGALGQKTGAGVYKKSGKEIQVLDNTSGQYRPAAGKIEPEVDAILKERDPAKPLAAL
RASPHPQAQFIWSLLRDTFHYSAVHLADMADNARDVDLAMRWGFGWAQGPFETWQAAGWQALAQAIAEDVTAGRAMSPEP
LPAWVLDRDGVHSAAGSWSARAGTIRPRSTLPVYDRQLTAERLVGEPPAPRGETLWENEGVRLWRLPEQDPGLAILSLTS
KMHTLGSEVLHGIQHAVALAERDFDGLVFWHDAPFAVGANLEQVYQACQTGHFDMLEGMVETFQNTSLCLQDASIPVVAA
VQGMALGGGCEFLMRASHRVLALESYIGLVEAGVGLIPAGGGSAFLAGRAADLAHTTATPAEVFPYLQPVFQNIATAQVS
KSALQAVSMGYAQDQDVIAFHPDELLWLGLRVARAAADAGHVPRPRRKRLPVAGRTGIANFEMILVNMHAGGMISDHDLR
VARSAAEALCGGDVDAGTQVDEEWMLAVERRAFVALLRTPETQARIRHTLDTGKPLRN
>AHV93851.1 D-alanyl-D-alanine carboxypeptidase family protein [Bordetella holmesii ATCC 51541]
MFALIVDAQAATAPAVDARAWLLLDVTTGQELASSQADMRIEPASLTKIMTAYLIYEDLAAARLSLDQKVRISTRAWRVP
AGSSRMFLEPGQQVSVQALLTGLMVQSGNDAAVALAEASAGSVEAFVARMNRRAAELGLAHTRFASPAGLPDPQTYSTAR
DLGRLAQRYVADFPQWATRFDAQREFEYGGIRQRNRNRLLWQDSSVDGIKTGHTGAAGYCLIATASRSEQGVTRRLIAVV
TGTDSDKSRTQAGQTLLDWGYQAYDLAPAWGSPASARVWMGASDEVSYAPRHAPYLAVPTGRTPERQVVLNTPLRAPVQA
GQQIGEVRWLLDGQVVGQAPLLASEEVAPASYAGRMMDAATLWVGQTLNIGPAAGG
>AHV93852.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MPAVSLEHISKIYPPRRQGWKSLLGATAGPGFQALNDVSLRIEHGEFFGLLGPNGAGKTTLISVLAGLARATAGRASVCG
YDVVDNYKEARRALGVVPQELVYDPFFTVRETLRLQSGYFGLRNNDAWIDEILFNLGLADKADANMRALSGGMKRRVLVA
QALVHRPPVIVLDEPTAGVDVDLRRTLWEFISRLNRAGHTIMLTTHYLEEAEALCGRIAMLKAGRIVALDTTQALLARVG
GVDLEDAFVRIMHQDDPLPAVLNDEETLP
>AHV93853.1 dltD central region family protein [Bordetella holmesii ATCC 51541]
MLKRYASALLGTTSRMRLAMSVYRGSLPPARVDVRAIMFLARFVATLVRSHRLRFEPVSAGSSDKERPELGTTQMGRGRA
HVLAVLAAVATLAMLRWLLPEGSIAPQAIVSGHVSNLGANYPTQLGTLQRLGRALEHGEAVVLLSSSELTSSDLRFIPYN
FLGKELAAPVTAYGHAYFQSLGMYFLLASLEEKLSAQSRVVIMVSPGWFDSRGLDRAAFKEHVLPLLPHLVQRADTRDAL
LH
>AHV93854.1 tripartite tricarboxylate transporter TctA family protein [Bordetella holmesii ATCC 51541]
MLAAISILLPLTYTMTPTAALVMLSGIYYGSQYGGGITSIMLNLPGTASHAVACLDGNPLARNGKAGSALFMLMFSSFCG
ASVGILAMILFSPMLVDVAFKFGPAEYFSMMMLGLLAGATLAKGSALKGVAMVVVGLLLGVVGTDVNTGTMRFHFSILEL
SDGLQIVALAMGLFGVADFLKNINRIGDGGSIANTKISMSAMRPQPGDIKQARGALVRGTAIGAAFGILPGTGPTIASFI
SYATEKKVAREPQRFGHGAIEGIAGPEAATSASTQTSFIPTMSLGIPGDPVMALMLGALIIHGIQPGPQMMIEHADMFWG
LIASFWVGNVLLLLLNLPLIGMWVRMLSVPFRYLFPAALFFVCVGVYSTNNNLFDVGMVTFFGVVGYMLMRLRFEPAPLL
LGFVLGPMVEENFRRALLLSRGDLSIFISRPISLGFIVACAGLIGLLAVSALRQRQRRRALALRG
>AHV93855.1 hypothetical protein D560_0020 [Bordetella holmesii ATCC 51541]
MRYVVVPQTTGVLLLETPEGLRESQLTSGVAYTRPIGVEHNVINPNDTEFVFVEVEIKTAG
>AHV93856.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MKPYALMLTTAMALAAHTGAAHATLTPGAKAAAFTTQAAQGGQVFAFDMAQALQKGPVVLYFYPAAFTQGCSLEARNFAK
AVPQYQALGATVIGVSADNIETLKKFSVSECGGKFAVAADTDGKIMKAYDAVSDKRPESAKRTSYVISPAGEVVYEFTDL
SPEHHVPNTLKALREWRASHPLGK
>AHV93857.1 hsp70 family protein [Bordetella holmesii ATCC 51541]
MTACGIDFGTSNSTVGWMRPGQHALLALEDGKATLPSAIFFHDEDDEVSYGRAAIADYVAGYDGRLMRSMKSLLGSSLME
GHTEVGGRAVPFKVLLTRFIAELKARAERTAGRRFEAAVLGRPVFFVDDDPKADQLAQDTLGEIARSVGLRDIDFQYEPL
AAAFDYESQISREELVLVIDIGGGTSDFSLIRLGPDRAGRADRRQDILAHGGVHIGGTDFDKQLSLAHVMPLFGLGGQLK
TGKDVPSTQYANLACWHTINQAYTRKAAETFAFIQAQALERDKIEHLMTLIKNREGHWVAIQVEEAKIALSEAPATRIEL
ARIASGLAADIDRPAFDVSMNGLIDRVETTVARLLADAGVSTVDTLFFTGGSSRVPCLRERVSALVPQARSVEGDLFGSI
GAGLALDAQRKFG
>AHV93858.1 EPSP synthase family protein [Bordetella holmesii ATCC 51541]
MSALAYLDLPAARHARGVVALPGSKSISNRVLLIAALAEGRTEISGLLDSDDTRVMLAALRQLGVAVVDLGPGHVAVEGL
SRFPVEQAEIFLGNAGTAFRPLTAALALMGGDYRLSGVPRMHERPIGDLVDALRGWGARIDYLGQEGYPPLHLGRGHAQA
DTVRVQGSVSSQFLTALLMAAPIEAGSSGRTITIEVIGELISKPYIEITLNLMARYGVTVRRDGWRAFTIEGGARYRSPG
RIAVEGDASTASYFLALGVLGGGPVRVTGVGENSIQGDVAFADTLAAMGGTITWGRTGSKPAAGRWPTEGGSRLLTPIST
>AHV93859.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNADDLPPDLVR
HRHRAQG
>AHV93860.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93861.1 kinase/pyrophosphorylase family protein [Bordetella holmesii ATCC 51541]
MTASPIVRTVYIVSDSTGITAETFSHSVLSQFEEVEFKPIRLPFIDTLQKAEETAARINRNADETGLPPIVFSTLVNPEI
LSRVRQANGIFLDLFGTFVSHIEQALGLKSSHSIGRSHMAADSEKYRNRIDAINFSLAHDDGQFVNQLDQADVILVGVSR
CGKTPTSLYLAMQYAIKAANFPLTPDDFERNTLPKTIAPYRSKLFGLSIQPDRLAEVRNERRPNSQYATIEQCRYEVAEA
ERMMRREGISWLSTTTKSIEEIATTVLQEVGLGRY
>AHV93862.1 flagellar basal body-associated FliL family protein [Bordetella holmesii ATCC 51541]
MATSKSPAMPAARSATGGAGKLLRPLLALLTLVLVVVASVAGTWYFMSRYQQQQLQAAMQLGIGQQQGQAGATGPVPTTY
TPPPAPPAVVPAPIFFPLEAFTVTINDAESERIMHVGLTLRLGDEQSRQRIERYMPEVRNRILMVMSSQTPQSVQSLAGK
QAMAKSLQAAINKPFAPLPDGQAVSDVLFTAFVVQ
>AHV93863.1 UDP-2,3-diacylglucosamine hydrolase [Bordetella holmesii ATCC 51541]
MNKLALPGSIWLASDVHLGPATVATSEAFMGFLQAAAEEADALLLPGDIFDAWIGDDVIRAAPPWLAQALQGIKATAARI
PVYLGRGNRDFLIGQELADAVNATLLPEPALIDSDFGTLLITHGDEYCTDDVAYQQFRTMVRDPRWQAQFLAKTIPERLQ
MAQQARGESMAANQTKTMAIMDVNTQAVESAFRDADVAIIVHGHTHRPDRHVMAVDGKKRERWVLPDWDCDHGESRGGWL
VIDRDGLQLYDLDVAA
>AHV93864.1 hypothetical protein D560_2495 [Bordetella holmesii ATCC 51541]
MDDEFGTAWPKAFEFTQLRRRGAIQIQRRGRRRRTQKQRGGHESARQAKGTETHERLLKKDGHRRQGFQNALTGPRAARQ
FAVFGLA
>AHV93865.1 hypothetical protein D560_3096 [Bordetella holmesii ATCC 51541]
MKARWPRWVGGLALVAVLALGFAGYLSPQMRLSWENVTALCGF
>AHV93866.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLIEFDQVVVIVEGRPLLQVPGLTLSERRIGIVGPNGAGKSTFARLLNGLLLPQQGQVRVNGLDTRREARRIRRQVGFVF
QNPDNQIVFPIVREDLDFGLKPLDMPAAERAERIAVVLAQPGIAHLAERSSFSLSGGERQLVALAAVLVREPGLIVFDEP
TTQLDLRNRNRVSEAIAALAPSACVITHDLDLLADFDRVLVINEGCIVVDDHPAAALRWYREHCA
>AHV93867.1 poly A polymerase head domain protein [Bordetella holmesii ATCC 51541]
MSAVEDAATAGLEVYIVGGAVRDALLGLPAGDRDWVVVGATPQDMVRRGFIPVGGDFPVFLHPLSKEEYALARTERKSGR
GYKGFTFYTGTDVSLEQDLRRRDFTVNAMARTQQGELVDPLNGQADLRARCFRHVGAAFAEDPVRILRLGRFAARFADFS
VAAETQALCRQMVDEGEVDALVPERVWKELSRGLMEAVPSRMLQIWDACGALSRVLPQLRQWHSVAGDLDAAARRGLALP
GRYALLARLSPERETLATRLRVPGDCADQARLLPLVLQALPAASASERLDVIERCDGLRKPDRFLALVEAASVVSQVDIA
PWSRALAAVRGIDAGAIARQCSGDAVRIKAALRHARLAALQVAA
>AHV93868.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93869.1 flp pilus assembly ATPase CpaF domain protein [Bordetella holmesii ATCC 51541]
MAGTFVNGARVAMHGPLVAADTIVIGPCRLRLSPPPPTPADVAAGSVQIDDASETWQACRAALHEALIQALDLRRRDVAS
MSDGALRQEASGLLARLLKESAVAVPETVDRVSLCKSVLDEAVGLGALEPLLEDSSISEIMVNVTCSP
>AHV93870.1 leucyl/phenylalanyl-tRNA--protein transferase [Bordetella holmesii ATCC 51541]
MKLPWLQADTPFPPPHTALDEPNGLLAAGGMLTVDRLRQAYSQGIFPWYSQGEPVLWWSPDPRMVLACDDFAPSHSLRKK
LRGLARAEQAGESTLSVRVDTAFAEVMAACAGARQGQPGTWITAEVQAAYCAWHAAGQAHSIETWQDGRMIGGLYGVSLG
GMFFGESMFAHATDASKIALAYLVGLLRRHGVTWIDCQQQTRHLASLGAQPIPRARFLDHVAQATQLPPPPWRRGRLLQT
GDILDLPEQR
>AHV93871.1 anthranilate phosphoribosyltransferase [Bordetella holmesii ATCC 51541]
MTITPNEALTRCIEHREIFHDEMLHLMRMLMRGEMSPQIASALLMGLRVKKETVGEITAAAQVMREFATPVVTPNPADLL
DMCGTGGDGSHTFNISTTAMFVAAAAGVPIAKHGNRSASSSSGSADVLEALGANLQLSPEEVAECIQATGIGFMFAPAHH
GAMKNVAAVRKELAVRTIFNILGPLTNPAGAANQLMGVFHPDLVGIQVRVLERLGSRHVLVVHGKDGMDEASLGAATLVG
ELKDGVVREYEIHPEDYGLSMMSNRSIKVSNREQSRELVMEALDNVEGAARDIVALNAGLAIYAGNKADSIESALALAFE
TITNGAARAKLEEFCAYTRKFSK
>AHV93872.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MFKYLSPLAVSVLLAACTAPAEKPLTSPDAHTSRTAVDWQGSYAGVLPCADCPASK
>AHV93873.1 putative citrate utilization protein B [Bordetella holmesii ATCC 51541]
MFGVVFAFAVVALAVGVIRFWRDVSPGAASGPAVAEAAHDALRLKYLDGGHGKGCNEADDAFTLARRRFHHFTFYGFMLC
FAATSVATLYHYLLDLHAPYPFFSLPVLLGTAGGLGLLLLALRDTGWMGIMLAVHLGVVMALFLTLPYGKFAHGIFRCAA
LLKSSIEKCQPSKLQLGSD
>AHV93874.1 N-acetylmuramoyl-L-alanine amidase AmiC [Bordetella holmesii ATCC 51541]
MPVLPRLAHAATILAVRTWPAEEYTRVTLELDRELKAEQFTLENPHRLVVDIEGLTTNAALNDLVAKVRPGDPYIQGLRV
AQNRPNVVRLVFDLKQAVAPQVFTLKPVGDYQYRLVLDLYPKIAQDPLVAVLNKSASPDVDDPLARVLDEISRNQPTPAP
APLARGQEPAAALPVPTPKPATPAPGRTRRRMLTIALDPGHGGEDPGAIGATGLREKDVVLRIARRLKTLIDAQPAMRAY
LTRDDDYFVPLHVRVQKARRVRADLFISIHADAWVKPSANGSSVFALSERGASSTQARWMADKENAADLIGGVNLGSHDR
QVAKVLLDLSTTAQINDSLKVGTAFLDEIKKINRLHKNHVEQAGFAVLKAPDIPSILVETAFISNPEEESKLRSNAHLDK
LAQAMLTGIDRYFTANPPLARMADVS
>AHV93875.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MVSSMTVVLARFVYGVAMAWIALAIMLALALVCLRVVRRTVRSFETERQQDLASGLVVFVAVTVALAACYACGHVLHAWM
GKSALVGGQPQWLAGNSHLSAAALMGATVALGLAAAAPGLWRRLQTPRADRPVPQEGRAKPEKKASPQRSTKAAVKQRPR
PRRIAALGWAALFVILLGAILLAFAYIVAPLDPAPLAAGADAKMIARANVQAEHILRARPIYYAAAGLLGAGSLIVFGWL
ISHRWRGA
>AHV93876.1 receptor ligand binding region family protein [Bordetella holmesii ATCC 51541]
MKMKRYASAAAAVALACAALGAQAADKTVRIGAIYPLSGALASTGAEIKAAVELAVDIINNPHPELEGIPLAAGSGLPGL
GGAKLEVIFGDSQGKPEVGMADAQRLLDQEKVVALTGAYQSAVTKTASRIAEQRGIPYLNGESSSPDLTERGYKWFFRTS
PNDDTFVENMMQFLDGIKAVPTAKIAVVYENTDFGVNTFKAVEKFAKQYNRQLVANIAYSAGSASVTAEVQKLAAAKPDV
AIFASYTSDAMLFVRTMRESKYAPPVFLANDAGFIDSRFVQEVGPQVQGVLSRDVWGSDVAAAKAGLKKINDMYKAKTGK
ELNGNNARSMQGVLVLADAINRAGSTEPEAIRRALIATDLGESQVAMPWAGVKFDDKGQNTKGAGLILELKGSSYQTVWP
EKYRTDKNLPTLPFSWK
>AHV93877.1 azlC family protein [Bordetella holmesii ATCC 51541]
MASDSSDSTLEDIQQIRHERRVAFRQGVHAIAPALIATGTWGLVTGVAMVKSGLTESMAVTMTLLLYAGSAQLTSLPLIV
AGAPLWLIFAAGFVVNLRFLIFGAALHPFFRHLSWPKRLGLGYFTTDMGFVLFMPRFGEASVRGTREQLWFFLGTISPGW
VVWQVSSIIGVYLGSMVPAAWSLDFAAVLALMAITVPLVTTRPIVVSVLAAGLVAWVGQVLPLRLGLAAAVIAGIVAGIW
AERYLKRSAR
>AHV93878.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MVAHGAYADTTIKAVMHSPLRLTDPHATTAYITTWHGYMIYDTLLATDADNKIQPQMLEQWEVSPDGKTYTMTLRDGLKW
HDGTPVTSDDCVASIKRWAAGDGMGRTLLKFTDKIEKVDDKRFRVVMKEPTDLVLRALSKPTGTAAFMMPKRVAELPIGQ
PITDMTGSGPFKVAEFKPGVKTVYVKNADYVPRKEPASGLAGGKVVNVDRVEWEVMPDALTAANSLLSCEIDFVEQFPYD
LLPMVEGHQELKEETLSPVGYFNMYRFNFKHPPFDNKKIRQAAMYAIGQEDVMRALVGNPKYWQTCASLWGCGTPLQSDI
GKEMTVPSDISKAKTLLKEAGYDNTPILIMHATDVGTLSAQPVVMAQALRKAGFNVNLQAMDWQSVATRRASKAAPAEGG
WSILNTNWYATDIMDPVRSAPAAANGDNAWFGWPDLPQIEELRTKFALSSDPEQQKKIADETQRIGVEEGLYVPLGQMSV
PTVYSTKLSGLVHAPAFAFWNVKKAP
>AHV93879.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MTAPSHDAAVQRQFSPQASAYLTSAVHAQGEDLKQIAGIAAAHPQARVLDLGCGGGHVSFNVAPLVASVVAYDLSQAMLD
VVAAEAAKRGLANLGTCQGKAERLPFDDGEFDLVMSRYSTHHWEDPGLGLREARRVLKPGGIAVFTDVVSPARRCSTPGC
KPSKCCATPRMCATTPRPNGSRC
>AHV93880.1 dihydrolipoyllysine-residue acetyltransferase [Bordetella holmesii ATCC 51541]
MDVAVPDIGDFKDVEVIEVLVAVGDTIKPEQSLITVESDKASMEIPATAGGVVKSIKIKVGDRINKGDVILVAEGAAAPA
AKAEAAAPKAEAPAAKAESAAAPAKAAAPAQRPSPTQDLEDAALKPGQLPHASPSVRKFARELGVNLSRVTGSGPKGRIV
LDDVRGFVKTALAAPAPAAQGDGVALGLLPWPKVDFTKFGPVDAKPLSRIKKISGANLHRNWVMIPHVTNNDEADITDLE
ALRVQLNKENEKSGVKVTMLAFVIKAVVAALKKFPEFNASLDGDNLVYKQYFHIGFAADTPNGLVVPVVRDADKKGIIEL
ARETSELAKKARDGKVSPADMQGGCFSISSLGGIGGTHFTPIINAPEVAILGLSRSFQKPVWDGKQFVPRLTLPLSLSYD
HRVIDGAAAARFNAYLGQLLADFRRIAL
>AHV93881.1 alanine racemase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MSINVFVYGTLRSGEINDLNHVAARHGLPQPRALGQGRVPGYLVDFGDWPGLVPVADGRWVMGDIYQIDPQLLPLLDHIE
DVGAPGGSCFMRTEIAVQTTQGPIRCQYYPVDPAHLQDAPGITDDDWVSYRAARQAAAVDALETPALLLDIDRLHANTAM
MRARAAALGVTLRPHVKTAKCIEVALAAGDGRTGPITVSTLKEADQFFAAGFTDILYAVGITPNKLDHVGRLRRAGCDLK
IILDNRIAAEAVCEARSRLGLDLPCLLEIDCDGHRSGLKPDDPELLIIADILRVGGVTLAGVLTHAGNPITAAAAKPSWR
WPSKNGPPACTRHNACAPRAMPAPSSAWAPPPRPGMRTSSMASPSYAPGCICSLIWSWPGSAPAPSTRSRCRFW
>AHV93882.1 putative membrane-bound metal-dependent hydrolase [Bordetella holmesii ATCC 51541]
MFSTAYLFAGLAGRFMAEREVTAALQARGHQVTQVLATPTPLNILLWRVVAKTDADEYYEALSGWLDGSPPQLLAQSLNR
DLGKVLGDDPQLARLRWFTNDWLRYDVLDDTLVVTDLRMGLPGYYTFRFAMGERHGPDWQAITPRRWPSQRGGWPEFRQL
LARIAGTPLPLADWAQRNFD
>AHV93883.1 hypothetical protein D560_1958 [Bordetella holmesii ATCC 51541]
MPPVEHAFRLELDENTRALIASYVPADHDAQPPSWDTLTRVAQAQGWGSEALDHASAVNFIEACREAKEPVLASVDEVRD
GGFELDLSPDRMAAVLAVSPPRGGRRVTLADVQAHLLEVGVVYGVREDAIQNAVSDRRTNTVMIAQGTPPTRGTPARFES
LLDALRVREQEDDDNAMVDYRELGNLDLVAPGIPLMRRIPAVQGKPGLNVLGESVPPAHVPDTQFARNLSGVTVDEHDPC
LLRAAQSGSPMVVPQGVLVNSLVEVDRVDLSTGNIIFDGTLKVRGDITAGMQVRVSGDVVVSGTIEAAQVQAGGNISVNG
GVIGLAAPRQPALRGQISSAHPVQMRTAQLTAGGTVKARFIENAVVNAERNIAAEREVRQSRLYAGESVTVGPPKSSLGV
ITGGETHATKSVHAGTIGSMAGIPTAVSVGLHPHGQAKRASLHQRRATLQEEQSKLEKLIVFLHYNPAKNVNGMTDRARS
TYARVTDDLNLLESEEEQLNDALQPFASATIVAYKRFCCGASLRINGKLLEVMEDVPGGHAVLDPELGQVRLSARAGH
>AHV93884.1 phenylacetate-CoA oxygenase, PaaJ subunit [Bordetella holmesii ATCC 51541]
MSSVDRAQVMDWLGEVSDPEIPVLSVVDLGVVRAVDWEGQTCVVTITPTYSGCPAMREITEDIVRVLATHGLDQVGVDTR
LAPAWTTDWMTERGRAALKGYGIAAPAERAVDISSISRRQAMPTIPCPHCGSSNTRMISNFGSTSC
>AHV93885.1 type IV leader peptidase family protein [Bordetella holmesii ATCC 51541]
MGAGDVKYLAVIGLWLGLMPWLMVLVLASVPAGIHALCQAWGVLRHPRRARRGVPYAAYLALVALSLAVMPSSWPWCSWC
SSWWFTAF
>AHV93886.1 trigger factor [Bordetella holmesii ATCC 51541]
MQPVVETLSGLERRVDLAISVADVEKEVQAQLKRVARTAKVPGFRPGKAPMAMLERSHGPSIRYDVINSQVGRAFEQAVE
GAKLRVAGSPSLEPKTEGVDEATLAFSATFEVYPEVAVPDLSGLAVTRFETEVSDAEVNKTLDVLRKQRATYETREGRAA
QDDDRVILDFAGTIDGVPFEGGKAEDFPFVLGQGRMLPEFEEAARGLKAGETKVFPLSFPEDYQGKEVAGKTAEFTITVK
EVAEAVLPAVDAEFAKSLGQADADVEKLKADIRSNIEREVKVRSQGRTKTSVMDSLVDAAKFDVPKALVDNDVQGRIAQA
REELKQRGVPNAENMPMPAEVFAAESERRVRLGLLVSELVKQAQLQAKPEQVRARIEEFAQNYEQPAQVVSYYLSDRQRR
AEIEAIVLEDNVVAYVLEKAKVTDEKVPFDQLMGMA
>AHV93887.1 hypothetical protein D560_0267 [Bordetella holmesii ATCC 51541]
MHISTLMWRRALPGAMMAALIAAWATPALAHKPHHHRGDYTQSSWDGACKVERKWKRNGQYKEKRKCRPAYVYPHAVYPQ
PAYGTPSIVIQPPAIVIRP
>AHV93888.1 istB-like ATP binding family protein [Bordetella holmesii ATCC 51541]
MNLQHNRIEQICDVLKLERIGSEWPAMAQQCAREDASHGDFLERLLGIENDARIERQRAALMKIATLPSVKTIEDYDFAF
ASGAPRAQIQELAALSFIERAENVVFLGPSGVGKSHLAQALAYRAVMAGIKTRFLTAADLMMQLATAHKQDRLQQYFNRA
IIGPRLLVIDEIGYLPFGREEANLFFNVVAQRYERTSIIVTSNLPFSQWASCFSEDQTLTAALLDRLLHHAHIVQIAGES
YRLKDKRKAGNIKIRN
>AHV93889.1 hypothetical protein D560_1680 [Bordetella holmesii ATCC 51541]
MQIWVDADACPVVIKDILYRAATRWQLPMTLVANQMLRTPPSPWIRAVQVPRGFDVADAHITQHAVAGDLVITADIPLAA
DVLAKGVMAINPRGERYSPETIRERLTMRDMMEELRSAGVETGGPAAFSQADRKAFANQLDALLARHARTGSANNKPSV
>AHV93890.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MITHPFMSLEGKRLLVAGAGSDIGKATAQGARALGAVMQGVSRQAQDDPAVAVADLLNDEDLKRWVGELGQPLDGLVFCI
GQALLMPAHMLSRDAVRRVMDINVGSFVALLAALLRGRKLNAGASIVVLSSISAHTATEGVSPYAMSKAALSAGVSNLAL
ELQRRQIRLNAVSPAMVRTKMTAGSDVFNLDAMARERYPMGVASPDDVAALVLFLLSDEAAQITGWDTLMTGGVVEI
>AHV93891.1 maf-like family protein [Bordetella holmesii ATCC 51541]
MAVARQHPGSVVIGSDQVATIDGQPIGKPGDFARAQAQLRRLSGQMVEFHSALAVTDGQRTEQTDVITYCKFRPLSDADI
DTYLHAEHPYDTAGSAKAESLGIVLMESMRSDDPTAIIGLPLIALTGMLTRFGLPPLGCGA
>AHV93892.1 HIT domain protein [Bordetella holmesii ATCC 51541]
MSARDPQCPLCQSTGGELLWQGQHLRIIDAQEADYPGFTRVVWNAHLPEMTSLSTHGRDLIMRAVYAIEQAQRDTLHPDK
VNLAALGNMVPHLHWHVIPRWHEDRHFPSPIWAPPRFAAGQEPAEFFTRQQDLQARLHRYRDRVTEVMNALLWH
>AHV93893.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MNVPEVTSPAGSSFGRRRVTAGLLALMAVIAAPGALAQTASWPNRPVTLIVPFAPGGPTDVTGRVLGEALGKLWKQTEVI
ENRAGAGGTVGAGFAAKAAPDGYTLLLGVTGSHSIAGALYPSLPYNPKTDFEAISKIVQYPNAIVANVDVPAKNLQELIA
LAKKDGKYQVYGTDGNGTASHLTMEMLRERGGFPMQAVQYKGASPLINDIIAGHVPVGITGFPSAEEHVKAGKLKLLALT
TDKDYSGNHYPTIAEQGFPGFSAAPWSGIFAPKGTPPAVVQKIAADIKTVMASPDVAAKMKNQGLTDMPVTLKAFEEELD
RERATWETAVKVSGAKVQ
>AHV93894.1 mviN-like family protein [Bordetella holmesii ATCC 51541]
MSAAGVMLIGQVAMSFVNPLDQYAAANLGGNANATLGYASRLLSLVLGIGAVSVGRAALPVLADVQHRGDVQRARSMALK
WSWMMVGAGIAAVAVGWTLAPWGVAVLFERGAFTAQNTEAVASVLRWGLLQLPFYFGVLILVQLLASQNRYRIMSLIAVA
NFLLKAVLNAVLAPRMGTEGIMLATSLMYFLSFVCYTVAAMRPAEDPEESA
>AHV93895.1 response regulator [Bordetella holmesii ATCC 51541]
MKSAFSTQLFATVEGALRMPAEAAARQGVSELPANVPDASVLLLCADPAQSAALSQSLIDSGFPMACCSELATMYELHGQ
HRHSFVILMASQGRRSWPQRGCAPWRLAWGLWP
>AHV93896.1 ribosomal L10 family protein [Bordetella holmesii ATCC 51541]
MSLNRQEKAVVIEEVSAQVAKAQSIVIAEYRGLDVASVTVLRKTARESGVYLRVLKNSLARRAVAGTAFEPLAEQLTGPL
IYGISDDPVAAAMVLAGFAKSNDKLVIKAGALPNNLLTQEGVKALATMPSREELLSKLLGTMQAPIAQFVRTLNEVPTKF
ARGLAAVRDQKAAA
>AHV93897.1 flagellar assembly FliH family protein [Bordetella holmesii ATCC 51541]
MSDTRAHGALTTDAWRRWQMTSFDLPQPEPEPAPATVDPGPDPETLKQQWRAEAEAQGREDGYARGHEAGLAAGLESGQE
QGWKTGHQAGYSAGLAEGREQARQEGLQLAALSAATAHSLQQLEETMGQALLTLSLDIAGQILRTTLAEQPQSMLEAVRE
VLRMPAPGSGGILRLWVHPQDMELVRLHLADELRDGNWRVLADESITRGGCRAESPLGDIDATLQTRWRRVVASLGRASD
WEDGA
>AHV93898.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MAHLRLGDTAPDFEQKSSIGTLRLYDYLGDNWGVLFSHPADFTPVCTTELGYTAKLADEFAKRGVKVLALSVDGEESHSK
WIDDINDTQSTRVNFPILADEDRKVSELYDMIHPNANATLTVRSVFIIDPAKKIRLIITYPASTGRNFNEILRVIDSLQL
TDSHSVATPVNWQDGDDVIIVPSLKDEAVIKEKFPKGYKAVRPYLRITPQPNK
>AHV93899.1 outer membrane autotransporter barrel domain protein [Bordetella holmesii ATCC 51541]
MDAAATTSTQNLGTGGIFIDRNGLLTLNTTGALVFTNVLTGTGTLQASNGGQSFSFGAGVGSAYAGAVKLGQNRFELGDA
SGANANTAALTNATLVLQAGNTTDVGQGSQAIGGLIIDGGTLNFDVTTPSASVSNSTIDTSGLLHAGRVGNVGIVLPPGV
DIKNYTPTAPGTAHLFDQQKGIGGVDIKLVNSLGSLSGTGANLVLVDQSSNVITDAQVANLLQGGVLAAEATYDYRLHTG
RQDDGLYAGYGLTQLNLIGTGADALLLNLSGASGLVNNLDVKVTGVGDLAVDALSGRFNVISLSGTHNDYTGVTDVRTGT
LLMANPNVLGKTAELLVQGGAIADLAGYNQSVGKLTTSAGSAVHLDGATLTVTDAQRQAGDTSGGYLASNTLFGPGQLVI
DPSVLAIDGQQSGFAGSVTVTGGSTVVLNTADALDTAVGTQGVAGIGVNLVTAADRLVFGDLSQRTSSAVTGFQNGATTL
MIAGAGQVQVMDKADVTFLKDMTYTGGTTIGAASRLQLGNGGTTGSIIGNVANSGTLAFNRADDITFAGVISGSGGVTQD
GAGTTMLSGANTYREARQIKQGVLAAGAANVFSPNSAVTVGAAGMMKLLGLPQTVGGMNNAGVVDLGGAPGTVLTVSNNY
ASNGGSLLTRVALGNDSSVADKVVAGSVTVDSGGATRVFVSNAGGLGALTANDGIELVHVTGGAAASAVDAFVLGSAVKA
GAYEYQLVQHGVRDANGNWYLRSSLDVPVDPVDPVIPTDPYRPEVPVYMSSPGLASRFGLAMLGTCDDRSGAYVDAMTTN
CGDAGAGKAVWGRLFGQRGNTDFAGSGFADRLEAFASKGPAYHYTLSGFQTGVDLYRSLDDNNAGNIAGVYFGAGQAQAK
VDQANGGRVGRVDMDAYSAGAYFTRRASTGWYVDVVAQATRYGRIKAKSDDGERLRSDGWGYVGSLETGYPIALSEKFSF
IPQAQLIYQHVSLTGGSDSFGSVDYRPSNALYGRVGGKLSMDLSSRPDRNLSAFARANLWQDFGAKAKTEFNTLDGQNPV
LLKTKLGGSWAQVGAGITGQVGKSTSLYTSIDYNFPIDSGKGSGIGAMVGFKYQW
>AHV93900.1 ybaK / prolyl-tRNA synthetases associated domain protein [Bordetella holmesii ATCC 51541]
MDVFEQLQDLLTKHAVSFRLLRHPAAGKSVEVAAIRGTEVSQGAKALVCRIKISATQRKHVLAVFPADAQADLEAIARAA
GGKKAALASLDLARELTGCEIGAIPPFSFNPELQLIVDPTLRQRHDEIVFNAGRLDASILLRTEDYFRIAQPELAPLVRS
>AHV93901.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MQDARRSTFKKLTTAFFAAGILCAASQAAAQSHPLMVVVPFGPGGSSDIVARTIGQQLGQDLGRNVVIDNKPGATGAIGA
SAVARSNPNGDTMLIASIGVYAINPAIQPRLSYKPQEDFTLLTEAVRTPNVLVTNASFPANSVAELIELLKKKPGEISFA
SGGLGSSEHLNTELFWQETKTKGLHVPYKGSGQAVSDLLAGHSDVGFLNLSAVSPHVKAGDLPPDLVRHRHRAQG
>AHV93902.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLKLENIHTYYGAIQALSGVSVEVNQGEIVTLIGANGAGKTTLLMTVCGDPRAREGRILFEGQDITHEPTHLIMRNGIAI
SPEGRRVFKDLTVTENLQMGGFFCSRADIEAGLEHVFTLFPRLKERASQRAGTMSGGEQQMLAIGRALMTRPRLLLLDEP
TLGLAPLIIAQIFEIIRTIRDEGVTVFLVEQNANKALQVADRGYVLENGRVVLQDTGANLLVNDEVRKAYLGG
>AHV93903.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MTTVSPASSRTAGILCFLAALVALATFDAASKHMLAFYPAPFLNVVRYSAVSTIALFLLAGRGAARWSRQPYKPLLLARG
LALGTVGTCFMTALIWIPLSEATAIYFTSPLILVALSPWLLGEHVGLPQWLAVGAGFAGMLLIVRPGGDLPALGTALMAV
AAMAYAIFQVLTRKLAGRVASHVQYAYTAFICLLMTALPAPFFLPDPWPDAADWLAILAMGTGNGLAQILLIAAFQRVEA
STLAPLNYFHLLMAMVFSTFLFDRPPDGLAVAGMMLIVGAGIFLVTWRNAPGRSRRRSDAGGR
>AHV93904.1 putative exported protein [Bordetella holmesii ATCC 51541]
MQLTMRKLAPAALIAVLALAGCAAPKGADKTANANGQPDAAASAQAPATASAVEFYIASTDADPSLTPVKVSDGTLYLQR
APVLTRADLTEAQALVDRQGQNFVGLRFSEAGTRKLTDVSTQNVGKMLVLVIDRELIAAPRIAEPLNKGVLAFGVPTANA
AAAIAAKIRGDAQPAAAPAPAPATVPDAKR
>AHV93905.1 metallo-beta-lactamase superfamily protein [Bordetella holmesii ATCC 51541]
MNRLTIAGYEVDLLVIGFPGKSVCHGGLGWSTIALLRGHGRVVLIDTGPIGMRKLLMSKLKGLAVTPAEVTDVLLTHSHH
DHSINWVLFPNAHVAIAADELDWSVRQPWAKLPSPSSTCASLAIHLDCAA
>AHV93906.1 proteasome A-type/B-type family protein [Bordetella holmesii ATCC 51541]
MTYCIAAQLNQGLVFLSDSRTNAGVDQISNFRKLHVFELPGDRVMVLMTSGNLAISQAVLNVLAEENARRPDSIWRVPSM
FEATRRVGQAVRLVYERDAEALREQGVEFNINLIFSGQIGAAPYRLFQVYAAGNFIEATPECPYFQIGEAKYGKPILDRV
LQPDTPLDEAAKCALISMDSTLRSNISVGLPLDLLVYESGSLQVTHFASIDEQNEYFAMIRGSWGERLRQVFAEIPDPLW
SQPEDPDSLVPAHRVHQPMRVRPAGLADQPYAAPQLLAQGVHARQAS
>AHV93907.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAQHMVRERGISVRLACEVVGISQTCYRYVCKRSTENDEIADWLMRLTDSHRSWGFGLCYLYLRNVKGYSWNHKRIYRIH
RDLELNLRIKPRKRLVRQAPEPLTVPNQLNHVWSMDFMHDQLTDGRSIRLFNVIDDFNREALGIEIDFSLPSERVIRSLK
QIIGWRGKPLAIRCDNGPEYLSDAITKWAGQWGIKLEYIQPGKPQQNAYVERFNRTVRYEWLSQYHWEDLDHVQRAATEW
MWSYNHERPNMALGGYTPKQRLAMAA
>AHV93908.1 penicillin-binding protein 1C [Bordetella holmesii ATCC 51541]
MTMQVARMLDPALAGQPSRSLAAKGRQVWRAVQLEMHYSKDEILGMYLAHAPMGGIVEGVEMGARLWLGKSARDLSDAEA
ALLTALPQAPSRLRPDRHPERAQAARDKVMSRMQAAGLWSVARVADARIENVVAPPLRARWLAPLAAQRLLQGQARGQPV
VASTLDADMQTTVERMLLDRVDSLPPKVSMAVLVMDNDSLDVKAYAGSADFSDDSRYAHVDMVRAIRSPGSTLKPFLYAQ
ALDDGLVHSESLLMDVPMSFGGYAPGNFQASFSGPVSVSQALQRSLNVPAVDLLDRVGPMRFASAMLNAGVHLRMPAGAA
PNLSLILGGGGTSLQELVGAYRALAREGLAGQPRLRPDEPRRESRAMSAGAAWIVRDILEGEVTLTGLFSSPPRQDGRWP
GKPAPASGFVMPGLLASQMDGRSASGLGVRMARPIPVSLAPISQPRYCRTSWRRCRPEHPACGCVQHR
>AHV93909.1 prephenate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSAEQAPQASPAIAVLAVVGVGLIGGSFAAALRQAGQLGRVLGVGRNPESLAQALALGLIDEAVSPEEAAARADLILLAT
PVGSAGSMLARMREHLGPQCLITDGGSTKVEVVAAARAALGERISAFVPGHPIAGAERTGPEAADARLYEGRNVILTPLA
ENAAAAVARVRTAWQACGAHVLEMTPHEHDSVLASVSHMPHFLAAAYMAQVCEASDAATRLDLAGSGFRDFTRIAAGSPE
MWRDIFLSNRSAMLTELGALRAVLDRTEAALAAGDGASLQQWLQDAATARRAWRKESA
>AHV93910.1 hypothetical protein D560_1771 [Bordetella holmesii ATCC 51541]
MIAATSIVNVWSYGGHTPQARFFDRASGERMGCIPGKSLSGMSSKSAPRPPCWPGTTRTVPAGGRGEGRRRQRGARPNQA
PCRRHTRKIRNARVPR
>AHV93911.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MDTYGAMQTFAKVVELGSFAAAADRAAIARSVVTRQIAFLEEKYGVRLLNRSTRKLSLTDAGRAFYERVRPLLNELAELD
LALQAQGSQPTGRLRVAAPVSFGARHLGPAIADYLQHYPQVTIDVDLNDRVVDLIEDGYDVAVRIGPLTDSSLVARPLAP
QPLHVCASPAYLARYGTPQHPEDLRQHRCLHYSYASGGNDWTFEQDGHTTVLRINPTMRANNGDVLRTAALAGHGIIRQP
EFLVGEDLRAGTLVPVLPGYARAPITMMALYPHRRLLSPKVRSFVDHLESHFGTQTSAAGSVSNR
>AHV93912.1 hypothetical protein D560_3178 [Bordetella holmesii ATCC 51541]
MPLPPPDVSRQPLHTRSIRVQCYGRQDGLFDLEAELIDVKGYDFPKRNGEIFKAGDPIHRMHLRLTIDEEFNVVAAQAVY
DAAPYEASCMAIDEAYGGLVGLNLLKAFRHRVKERFGRVSGCTHMTELSQVLPTAAVQMMANRRRETANEEGQRPFQLDG
CHALRTDGPVVLEYYPRWYTGDSAPDTADATSESPSFSHSS
>AHV93913.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MAVIAGAGVAGLSNAWWLTQAGWRVVVVERAADLRDGGYMMGLSGPGLHTARNMGLVPALRAVEHDIRENIYRDRHGREI
MRIRYRDLLEQLDWITLRRSDLVRVLHEAVRDRCELRLPCTVQQWQDNGEKVQVSLSDGSHWQADLLIGADGVHSTLRSR
AFASRYEALGYRYAAYDLADTLGLAPDFVSYAAVGQQVEYHGLGEQRMAVLHVWRSDASGLVPPPRNVARCCRRWQPVAI
LKSANCSIVCRRMRPSSWTIWP
>AHV93914.1 monovalent cation/proton antiporter, MnhG/PhaG subunit [Bordetella holmesii ATCC 51541]
MIGADIPWWIAVPASLLLIAGGLLELTGAVGLLRFGHFYARIHAPTLANTLGACSVLLSSILVFSYLASRPVFHEVVIII
LLVLTSPVTGMMLMRAAVYRNRDAEVGPNVPRTSASSEP
>AHV93915.1 N-acylglucosamine 2-epimerase family protein [Bordetella holmesii ATCC 51541]
MSESDFADIQSLLRQHYSNVVLPLWLSAGFNPELGLPYEAVDDTSARPLPVARYRAMACARQIFIYSRDPHGHAHASRLF
DALLRIFRNPAGGWYYSVDAAGEPLDTTQDLYTHAFIVLACAVYFERTRHSEAHKVLLSTVRDIEARFRDEQGCYIAARS
SEGEIVRGREQNPVMHLTEAYLAAAALAEPAWFAQKLRELAQQVFDVYVDADTHCILELARDEPDNRIEPGHQFEWYALL
ASAPDVFDGLDLAALVGRAATWAEAHGVAAHTCGVHACLALDGSVIDGQQRIWAQTEYARYLALVASPDRLRQLQALRGR
FLHAAGWHEVLSPEGEVLRRDMPSTTPYHLWTGYVSVIGG
>AHV93916.1 acyl-CoA dehydrogenase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MPEQTAVPDSRGQNLFDVDPYAAPMAACYLPEDLYTHLLPHLRRLGELAGGQMDELAMTADHQAPTLSVRHRSGADESRV
EKHPAYVELERLAYSEFGLAALSHRSGVLGWPKPMPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRRYGDPALVEQV
VPQVTSLDFDTLRQGAMFMTEQGAGSDVSATTTQALLDDDGTWRLSGDKWFCSNPDAGFAMVLARSEADPGLKGVSLFLL
PRDLPDGRHNSYRILRLKDKLGTRSMASGEIRLEGARAWLVGERGRGFKQMADMINNSRLSNGMRAAGLMRRAVSEAMFV
ARERQAFGRSLVDMPLMRRQLAKMMLWTEQARSVMYQTAQALAQAEAGQASPALARIMTPLIKFRACRDARKVTGDAMEV
RGGCGYIEEWVEPRLMRDAHLGSIWEGTSNIVALDVLRAIRREEALPALRAHVDALLQAGRPCDPALADSQSQAVDGAFA
LAAHAAQEQRDDLARQAASALYHALSVAALRWEARLPALAGRGLLADQVLRHRLLPRNPCQAQENEDALNQRVLQAQA
>AHV93917.1 succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Bordetella holmesii ATCC 51541]
MSTKRIVKFEIYRYDPDKDERPYMQKLEVELQPTDKMLLDALVRIKNDVDDSLALRRSCREGVCGSDAMNINGKNGLACT
TNLRELKEPIVLKPLPGLPVIRDLIVDMTHFFNQYHSVSPFLINDTPPPERERLQSPEAREELDGLYECILCACCLTSCP
SFWWNPDKFVGPAGLLQAYRFIADSRDEATGSRLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV
>AHV93918.1 putative toluene 4-monooxygenase protein B [Bordetella holmesii ATCC 51541]
MTDQQATPEVVPLNAIFSTDFVAILVPVTTANTMDEVAVAVAYHSEGRRVRARPYPKVVIHHGKKLPGHLTVAEANIKPL
DHIAVEYELPAGVAE
>AHV93919.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIP
LRGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV93920.1 DNA protecting protein DprA [Bordetella holmesii ATCC 51541]
MGPVTACGLLRAFGLPQVLYAESASTLARQLPQALAIQLATQAAPPLQDLIERGLEWAQADDHYLLTLGDAAYPQALLSI
TDPPVLLYVKGRPQLLNRPTLAVVGARNATPIGTQNARAFARHLAAHGWCVASGLALGIDAAAHEGALAAGPECGGTVAV
LGTGIDRIYPTANRNLAHAIAAGGALVSEFALGSGAQAHHFPQRNRLVAGLARGVLVVEAARQSGSLITARLAGEGGREV
FAIPGSIHSPLSRGCHALIRQGAKLVETAQDITD
>AHV93921.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MANHSLKNATMAAVLTAVIVTPVFGLQLIRQGARTSLESRWDLVILAAAVVFLFQLLRPWLTKPLQRLKTGLPTLPAAPT
AGGRKWLFVLVLLGAAIWPFFAGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAYTYALLYHWGGWSFW
EALPFSGAVAALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLINLTELTGGPDGISGIPKPTFMGLELTRRASQEGGE
TFHQFFGLAFQNQHLVIYLYLMALVLALVTLFVSTRLIRMPVGLAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGF
GGAFFAARQGMVNPESFTFIESALILAIVVLGGMGSQFGVILAAILLTVLPELAREFAEYRMLMFGLVMVLMMMWRPQGL
LPMKRPHVELSK
>AHV93922.1 periplasmic binding family protein [Bordetella holmesii ATCC 51541]
MFSAILLAALALAGSPAGAQPISLTDDAGRHVRLPAPARRAVTLTPHATELAYAAGAGSYLVGSTRGSNYPPAARALPSV
GDAFQPDLERLLGLRPDLLIAWQPSAAGSLAGLPAKWGIPVYYSDPRKLDDIPSAIEHFGTLFGTESIARAEAGRLRDRL
QQLRQRYAHKTPVRVFVQAGVRPLYTINDNSIIGDALRLCGAVNVFGASQLLAPQVSIEGVLAAAPRP
>AHV93923.1 endoribonuclease L-PSP, putative [Bordetella holmesii ATCC 51541]
MSKQIIHTDAAPAAVGPYSQAVAASGSTTVYLSGQIGLEPGTGDLVSENFDAQVRQAFANMEAVVKEAGGSLNDIVKLTL
FLTDLNKFTAANAIMAELIPQPFPAHSTVGVASLPKGAQFEVEAILVL
>AHV93924.1 ribosomal protein L32 [Bordetella holmesii ATCC 51541]
MAVQQNKKSPSKRGMHRSHDFLVNPPTAIEPNTGESHLRHHISPNGFYRGRKVLKTKADE
>AHV93925.1 hypothetical protein D560_0196 [Bordetella holmesii ATCC 51541]
MVNRNSHTRPHNGWWKASSAPRRWLDAMRSDKPAEGQTAAPAAKVPAEQA
>AHV93926.1 marR family protein [Bordetella holmesii ATCC 51541]
MAVCSRLFRMNIVAARNADRAFRAHGMHQGEFDVLATLFRAGLPYSMSPQQLIGALLLSSGAMTNRLDRLESAGLIARSP
NPEDRRSVLVSLTQQGQRALRHVLEAYLDEMEQTLAPLNASERRQLAGLLKRLLAPHDQHAPGGVEF
>AHV93927.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MNPTLLSVQRLNAWYGAAHTLFDVSLCVGRGEVVALMGRNGAGKSTTIKSIMGLVSRRHADMRFMGRDISTMRPFEVARL
GLGYVPEERRIFTDLSVAENLDMGRQPARRWPDGSAAANWQPQDMYRLFPNLATLRDRPAGLMSGGEQQMLAVARTLMGN
PYLIMMDEPSEGVAPLIVEQMAQMILRLKAAGASILLSEQNLHFAMLVADRAYVLEKGQICYHGGMDELAADTAARRAYL
SM
>AHV93928.1 hypothetical protein D560_2841 [Bordetella holmesii ATCC 51541]
MQSAANQVGAAMMQLSAPLLSQYVADALLGAQKRASAG
>AHV93929.1 pepSY-associated TM helix family protein [Bordetella holmesii ATCC 51541]
MKPGLRQRMSWLHTWCGLVGAWLLCLIFLAGSLSVFRAPISRWMGAEPPLPSKPVQVPQADVLAHAARFLSGQDAHARFW
RIELPGETSQTLRLVWRSASGATHEATMDPRDGALLPQPWGRKTEGGRHFMTLHYSLHASTAGFWLVGALTVAMLVALLS
GIIVHKRIFKDFFTLRRGPGQRAWLDGHNACAVLTLPFQLMIAYTGLAIFYTSYMPGPLQSVYGEQGYARWQADLSRQET
PGSAVALPAAPALQADRPVREQTGALLRVAEAALGNPARMIMIERPGQPRERITIYAHPDSDSTQRHLISPAGRLAFDGV
SGRPVALMAGQPAADSAHEVMERLHVASYGGWIVKWLYFVCGLAGTLMMACGAVLFIIKRRNRPEGEFGRLTPGFYRLAE
SFNVAAIAGAAVACIAYLHANRLIPAHLPGRDAWEIKAFLLIWLLSLAHACVRPPLRAWAEQFACAALLCLLLPFVNALS
TGEHIFTYVRAGDW
>AHV93930.1 hypothetical protein D560_3877 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRS
>AHV93931.1 transcription termination factor Rho [Bordetella holmesii ATCC 51541]
MHLNELKALHVSQLLEMAAGLEIENANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPDGFGFLRSPETSYLASTDDIY
ISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNSVTPETIKHRIMFENLTPLHPNQVMRLERDIKSEENLTGR
ILDIFAPIGKGQRGLIVAPPKSGKTVMMQHIAHAITTNYPDAVLIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRFFGAARNLEEGGSLTILGTAL
IETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPAINLNKSGTRREELLIKPELLQKVWVLRKFIHDMDEIQSMEFIV
DKMRATKTNAEFFDMMKK
>AHV93932.1 TPR repeat family protein [Bordetella holmesii ATCC 51541]
MTYKPLIRSFLLALALCGAAPVVQAQSMYGGASEGRNANMTKLDEPRPEGGWDGLAKVLEAVKPGVDTRLDPTASQITDH
IEQLLNAGRNEEALKMIEARQQASRKIPGTDVQLMFQHARALAALKRPQEAEAIYAEMTTRFPELPEPWNNLAVLYAARG
ELNQAQDALNMALRADPNYAAARSNLGDIQLMITLRSYRQEAARGVPGMKEKAQELDKLLKDKSHS
>AHV93933.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MKVSERIRQSVENDIRHGTLLPGDPIDEQQLATRYQVSRTPVREALLQLKVQGMLESQPRNGMVVARLDVQELLAIWELM
AEMEGVCTRMACQRMSAEEREELARVHRAAAPIAEADDSQAWRDANHDFHEILYRGCRNPYLREQLVGLRARTGAYLRHA
FTAVGRVRASYEQHGELVEAILANDPDRAHRMMMRHISLAQGAKGLADFLINLPRSMVKT
>AHV93934.1 phospholipase A1 family protein [Bordetella holmesii ATCC 51541]
MSYATASGATRALGLAVLLAASLPAAAGVTYRFDRPSAAPGETVRIEAIYFNDGNTRAQWQPPARLVLQWRDPQGRVVRT
FARLKGNPSALSVPVNNFARLSWAAVVPVSAQGLQAISIEGEPALMALDATGREAGNLVSQTANVPVTDAHSGQEVPAAA
VMAAGASPEAGPAPESVARQQATTQNSGFDSFRIALSAYEPMYFDIGWRGRTTARFQLSAKYRLFSPADGRDARWFENFY
LGYTQTSLWDLQGDSMPFIDTTFNPSVFWKNDRLWSSANAKWRTGVNTGVEHRSNGKDGDDSRSVNDAYIEPALYYRFDG
GSTLSFSPRVRAYFGVASENSDYAAYAGHVDWKLRWQQDGGAVVSAMYRQGDNQRRTTQLDFAWPLKRTFLDMNGYLHLQ
YFNGYGETLLGYNQRNESQFRIGLSLVP
>AHV93935.1 paraquat-inducible A family protein [Bordetella holmesii ATCC 51541]
MEHHSLIACEHCASVYRWHSLDPGEAAACERCGSTLWRYSGLTLSSWLALAITGLILFAVVNTFPVAALSVQGMTSEATL
LDAVGITWRQGHYVVAFMTGTVGFVIPLLQLCVLLFVLAPLSVGKLPFGFTTVVRLLGLLRPWSMVQVFLLGVLVSVVKL
AAMAAVEPRVGLFAFGALTVFLTMLSRLAPAAIWRLAERRGVVPVHVPDLDTDTILAGCHVCGQVQAIDEAADPETTHHC
QRCDAVLHYRKPDTLARTWALLLAAVVFYIPANVLPVMRVSSITGDSAHTILGGVIELWEMGSWDIALIVFVASVVVPLT
KLLSLGFLALTL
>AHV93936.1 transcriptional regulator, TetR family [Bordetella holmesii ATCC 51541]
MYLLDRIRERSIVLTQQHIRELTCSAVEKLVAFVQKQAGWAAKYPDDLVILILTSLQFRETDTPARQAVRAYYAIMTEVL
TEIFTAGVHKGELSRTLDIETTVLANMARHDGNMLLWYRSGRDPAVGRMLTQSSCNAVRQFGANAM
>AHV93937.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLCIQGLSARYGATTVLRDISAAELKPGSLNALLGPNGSGKSTLLRALAGLLAAQGRLTLDGQSLAAMPPARRRQCLAYM
PQALPRAVRLSVFEAVLIACGQRRPADAPQRVAALLDRLGIASLADRSLDALSGGQLQLVALAQALLRRPRVLLLDEPLS
ALDLNFQFHVMDLLKRETRAHGLITLVVLHDLNIALRHADHALMLCAGEVIAEGRCEEVIRPEVLERAYGVRTTVQGQAK
PYLYIEGLARVPL
>AHV93938.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV93939.1 hypothetical protein D560_3448 [Bordetella holmesii ATCC 51541]
MNEGLRHKRDLRAEFAKFYPRVRCVTIYISNFLNRDA
>AHV93940.1 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Bordetella holmesii ATCC 51541]
MSADDDRITVEDDGQGIAAQTQAELFTPFVSGPESTRENMGLGLSLVQRICQHQGWRIELDGSPGHGCRFHIWLSPSS
>AHV93941.1 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Bordetella holmesii ATCC 51541]
MMLDFSPVFADFGALLDGALVTVELTACSLLLGCVIGLLVGVGRLNPKNRVVYNLCSTYLLFFRGTPLLVQLFIWFFGLP
QFGIVLPAFACGVLGLGIYSGAYVSEIVRGAIQSVDRGQTEAARSLGMSSGQAMRIIILPQAVVRMIPPLGNEFIALIKN
SALVSLLTIHDLMHEGQKIISVSYRSLETYLVIALMYLVLTTATTMILRKIEQRLRAEGMVQ
>AHV93942.1 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Bordetella holmesii ATCC 51541]
MQTLRDLIRYAVSRFHACQVALGHGSDNAWDEVVYLVLHGLNLPPDTLEPFLDARVVEQERERVLNLIDRRVNERIPAAY
LTQEAWLRGQRFYVDQRVIMPRSPIAELLDHGLAPWVREPESVQRALDMCTGSGCLAILAALAFAHAQVDAVDVSADALE
VARRNVADYGLEDRLSLHRSDLFEDLPEVAYDVIVCNPPYVNSQSMDELPAEYRAEPSLALAGGSDGMDLVRRILHAAPR
YLAPQGILVLEIGHERDHFESAFPDLEPMWLDTEQASGQILLLTREQL
>AHV93943.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MRRPVPAACLDGLKAIFGDRLSLAAAVREHHGRDESPYPPMLPDAVVFAHSTEEVAQVARLCNAHRVPLIPYGAGSSLEG
HLLAVQGGINLDLSQMNQLLAVNAEDLAATVKAGVTRKQLNEEIRSTGLFFPIDPGADASLGGWRRLGLRAPTPSGTGRC
ART
>AHV93944.1 type II secretion system (T2SS), F family protein [Bordetella holmesii ATCC 51541]
MTALALLAAALLLAAGAFLLLRRASAGQRRSATSAFLASRLDPSAARSTAEKLLRPIRKGGNAWARLLLLAGERSDGKLY
LVLLLPALVAAALGAMFGGAASAFAAFALFLLLGLFRLWRKADKRRRRVIHQLPGFLDGVVRLITIGNSVNAAFQGAMLA
VDDPLLEVLERTDALTRSGKELDAALLIVSRQYGLQELFLVSSVISLALRFGGRSEQVLERMSAFMRDLEQARDELVALS
AEVRLSAWILSLLPIGLALFIIIFNNDLFMNMWRDPLGFNMLLGGLGLQIIGTYCLFRMARGV
>AHV93945.1 hypothetical protein D560_0403 [Bordetella holmesii ATCC 51541]
MDRHVCRSYLRQPGLPVREASHIGLVEATGRRSGKKGASTARSARCRAECRYRNKSGASKRECRAFDKTNPPALRKHKGK
SQVPPAPSPGIARSPGAALETARGFVAQCRVLQREPVVRARPRKSSRIPNHHVCPDPPSAAIPRRRFLAGAGSVRAQGTG
AAGVHARLAPWWHADPTVFGRGSHMGARPLQGRPCSR
>AHV93946.1 hypothetical protein D560_1795 [Bordetella holmesii ATCC 51541]
MCVIACVTALGGGSMRDVLLGHYPLTWVVHPEYLAMTAGAALLTALCAHRLRHLRKVFLLLDALGLVAFTVIGCKVAQQM
ELSLPVIMITGVITGCAGGVLRDVLCNDIPLLFRSELYASVSVVTASVYLALDDFTGTSNLAVPAALAGGLALRLLALRF
NWQMPKFVYRGDWH
>AHV93947.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93948.1 inositol monophosphatase family protein [Bordetella holmesii ATCC 51541]
MQSSEILSPKAVLDLGAAIDVAVSAAHAGAAILQSYAHHRSDLIIDHKARNDLVSQADREAEAAILDVLRERSPAFGIVA
EETGGQAQGPATWYIDPLDGTTNFLSGIPHYAVSIALVAHAGTQASPGVPLQEDTPVVGVVYDPNREELFAGVYGIGSWL
NGRRIACSRTPRLEDSVLATGFPFRDFSFAPEYMPMLSDAISRSRGVRRMGAAALDLAWVACGRYDGYWEMGLAPWDVAA
GTLLVREAGGICHDMSREASWPITGRLVSGNPAVYDALHDMVTPHLKRPA
>AHV93949.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSNQFKGKKLLVVGGTSGMGMQIARTVLADGGSVVIVGNRTEKTEEARKELAALGQVWALTADLTNDEAVASLIKTLDEQ
HSDIDLLVNAAACSSPSRSCSIRVRTTTSTCN
>AHV93950.1 transposase family protein [Bordetella holmesii ATCC 51541]
MDELLQANQPLLTAYLMRDELKQLWFYQHPGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVE
GINNTIKVIKRRAYGYRDQEYFFLKIRSAFPGIPR
>AHV93951.1 ahpC/TSA family protein [Bordetella holmesii ATCC 51541]
MLQNREGQRVPNVTFPVRVDNTWKKLTTDDIFKNRTVVVFSLPGAFTPTCSSTHLPRYNELAQTFFDNGVDDIVCVSVND
TFVMNEWAKDQESANISLLPDGNGQFTEGMGMLVDKSDLGFGKRSWRYSMLVEDGVVKKMFIEPEKEGDPFEVSDADTML
AYLAPAASKPDQVVVFSKPGCPFCVEAKALLESKGYDPIEIPLEHKVRGRVIGAVSGRGTAPQVFINGKLIGGLDDLKVH
FG
>AHV93952.1 allophanate hydrolase [Bordetella holmesii ATCC 51541]
MNTYAAPILGWTLAQWRQAYREGATPEALLAAFTADSGHDNAWIAGLSAAGLADQLSGLARLLHRAGGDRERLPLYGVPF
AVKDNIDAQGWPTTAACPTFSYVPDTDATVVSRLRSAGAILVGKTNLDQFATGLVGTRSPHGPVRNTFDADYISGGSSSG
SASVVARGLVPFSLGTDTAGSGRVPAGFNNIVGLKPTRGWLSTAGVVPACRTLDCVSVFALTVEDALAVADIAGGFDGAD
PYSRAEPLGARISWQAPARVAVPAQCEFFGDEAARRVHEEALERLRQMGVHIEAIDFTPFEELATLLYQGPWVAERFAAV
QSVWRDQPEAMDPVVRGIVEQAQNFSATDAFVAEYRRAALARRIQDTLAGFDALVVPTSPSIYRIEQLQADPVTLNSRLG
FYTNFANLADLSALAVPAGMRDDGLPAGITFIGLTWQDHGLAAFGQRWQRALDLPMGATGRPLPPADVLPISVDTVRVAV
VGAHLSGMPLNHQLISRQATLAEQTRTAARYRLYALANTTPPKPGLVRGEHEGASIDVELWDVPSVHFGSFVALISAPLG
IGTLELADGRQVKGFICEPYGLQGARDITAYGGWRAFVADAQR
>AHV93953.1 glutathione S-transferase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MTTEYTPEKVWTWNKNSASTASNASSLNRPISGATHDKVLPVGRHPLQLYSLGTPNGQKVTILLEELLALGHAGAEYDAW
LIRIGDGDQFGSGFVDINPNSKIPALVDRSGPEPIRVFESGAILLYLAEKFGEFLPTEPAARAECLSWLFWQMGSGPYVG
GGFGHFYAYAPVKIEYAIDRFTMEVKRQLDVLDRRLADHAYVAGDQYTIADMAIFPWYGGLIKGWIYDATEFLAVHEYRH
VQRWADSLKARPAVERGRIVNRLRGPVSEQLHERHDAADFDKVPKA
>AHV93954.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MDLELTEEQRAFAQAARDYAQGELAPHAAHWDAEGIFPREAFARAGALGFCAIYASEDIGGLGLPRLDATLVFEEMAAVD
PSTTAFLTIHNMATWMVGKWGTDDLRQE
>AHV93955.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MGATVLPVAANGPLQARRFGSYSLWAVGPADAVWAGKLTLPLTALREVPLLIPTDDFALTRRLRQACEAAGFDPQIAAQS
AHWDFLAAMAGSGLGTAILPEPLVQMLKTRGLTMARLARAGVQWEIGHIWVRDRYLSYAARAWLEVCDEILGAGARAQAA
SSEQA
>AHV93956.1 glycerate kinase family protein [Bordetella holmesii ATCC 51541]
MVRRLEARGYHGRLPRHRSGREDRHCPDSFKESLSAADAARAIERGVKQACPGAHTVLVPMADGGEGTVEAVLAATGGQA
RQTRVRDALGRDTLAQWGWLDDATAVIEMASAAGLEGIAAAQRDPLGADTYGVGQLILAALDDGARTLILGLGGSATTDG
GSGMLRALGARFLDAQGKEIAPGGAALQTLARIDLDGLDARLASLDVHVACDVDNPLCGPQGAAHVFGPQKGANPQQVAQ
LDAALGQLATIAHHTLGHDHRDTAGAGAAGGLGFAAHAFLRARFRPGVELVAERGGLAQALQGATLAFTGEGRMDAQTLR
GKTPAGVARLAQQAGVPVVALAGSLGEGYEALHPAGITAAFSLLPGSHTLEHALTHASDYLTARARDVMQLWMAAARRRL
>AHV93957.1 hypothetical protein D560_2305 [Bordetella holmesii ATCC 51541]
MLRIDYFAWLDFLVGVAFGGICVAIAMRCNAIGAFCVGLQSFGKASP
>AHV93958.1 ribosomal protein L11 methyltransferase [Bordetella holmesii ATCC 51541]
MRELVLYCREAQAEALSDALLEAGVLSVSVEDADLGTDDERPLFGEPGTEPTVQAWDRNRVVALLPDGADPAQLLEEAAQ
SVSLDVAEFADWSLRDVPDADWVRLTQSQFGPIRISDQLWIVPSWHRDDDSVQTPEGGIRIELDPGLAFGTGSHPTTHLC
LAWLEAELPAGADVLDYGCGSGILAIAARKLGAGQTTAVDIDPQAVQSTRDNALVNQVDLLAQLPEGLIDGQFQVVVANI
LSNPLKVLAPMLAGRVAPGGDLVLSGVLQRQAEEVAAAYAPWMSMSVWRERDGWVCLHGRKA
>AHV93959.1 chorismate lyase family protein [Bordetella holmesii ATCC 51541]
MTVLYQAPLAAGWLTRAPYVLTPAQRHWLFRPGALTAGLRQLGQVRLRVVAEYAEGAAPDEAQAMHIAPGSAVWVREVLM
SVDGVDSVPARSLTPLTASHGSWQGMRRLLTRPLADMLYHDRSVIRSPFACRRLTSAQPFYRMIARLPSVTPADARALWA
RRSVFWRHRQPLLVAECFLPEFWLHAGRTQPPLKAHDRRAGIPAQAISPRR
>AHV93960.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MDIFIQQLINGLTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMTATMIAASLVGADANMSAFAVLGLGLLVSVPL
CMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNLAMMVWGRNYLNFPQILAPEVLDIFGARMSTLQIAIVVIAALI
MGALLLVVHKTRLGTAMRATAQNREVAGLMGVNINTVISAAFLIGSALAAVAGMMVTTYYGVSQYTMGFMLGLKAFTAAV
LGGIGNLVGAMAGGLLLGVIEALGSGYIGDLTGGFLGSHYQDVFAFIVLVLVLIFRPSGLLGERVGDRA
>AHV93961.1 deoxycytidine triphosphate deaminase [Bordetella holmesii ATCC 51541]
MSIKSDRWIRRAAEGGMIEPFEAGQVRTANGGRIVSYGTSSYGYDVRCADEFKIFTNINSTIVDPKNFDEGSFVDFKGDV
CIIPPNSFALARTVEYFRIPRSILTICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYAGEGCAQMLFLE
SDEVCETSYRDRGGKYQGQRGVTLPRT
>AHV93962.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVEWVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRTIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTEVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV93963.1 oxidoreductase molybdopterin binding domain protein [Bordetella holmesii ATCC 51541]
MLIRKPSPISSSEITPEEVWRSRREWMMRSATVAAALGLSGWAGRRAWADEGALPGKSMPQFAVPDQQTSFKDITSYNNY
YEFGLDKGDPARAAGALKTRPWTVSVEGAAGKPRVFDIDELLKLAPMEERIYRLRCVEGWSMVIPWVGYSLSTLLKQVDP
TGNAKYVEFVTAAQRETMPGLRYPVLDWPYTEVLRMDEAMHPLTMLVFGLYGKVLPNQNGAPLRLAVPWKYGFKSAKSLV
RIRLLEQAPRSSWMKAAPQEYGFYANVNPQVPHPRWSQATERRIGEGGIFTPKRPTLMFNGYADQVAGLYQGLDLKANY
>AHV93964.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MRRTLIALAIAAAVAMPFASQAKTLRWAAQGDILTFDPHSQNEGMTIAANSYVYEPLVDYDKDFKVVPRLATSWEQVSPT
LYRFKLREGVKFHDGAPFTADDAVFSIHRAMAPTSNYKAYTTGIKEARKVDDHTIEIETTAPNPVLLRQLPNVFIMNRAW
SEKHNVAKPQDFVNKEETFAARNTNGTGPYKLKSREVDVRTTFEENPDWWNKKDKVGNVTEVVFTPIKQNATRTAALLSG
EIDFVLDPAAQDLDRLRQQAKVVEGNEYRTIYIGYDQKRPELLYSSIKGKNPFQDARVREALYRAIDADAIKRAVMRGLS
APTGTMIAPQVHGWTEDLHKRVPYDPEKARALLKEAGYDGTLNFTLDCPNNRYINDEAICQAIVGMWAKVGVKAALNAMP
RATYFPKVQSNDTSVYLFGWGCPRSMPCIPCKTSSTVKERVPTGCTTSATTATKMSTRSLTASRPKPMRPNGMRIFIRRW
KYTPKSLAISRCMTRSFPGRCARMSA
>AHV93965.1 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family [Bordetella holmesii ATCC 51541]
MIEAAIAAAAQRLAEGGLVAFPTETVYGLGADAESAEAVAGIYLAKGRPANHPVIVHVAPGADLGHWAIDVPAQAQRLIE
AFWPGPLTLILKRRPGVAEAVSGGQDSIGLRCPSHPVAQKLLCAFAALKPGGKAGVAAPSANTFGHVSPTRADHVRAEFP
REVAAGMPVLDGGASEVGIESTIIDLSRLDQGVGPVLLRPGHISALQISRVLGEPVSRPDAAAPRASGTLKAHYAPHTQL
ELIDEANWARLRAGDRPAGRIAMVAYGWRGEAGDGLEWHMVPADPTRYAQALYAMLRELDVQGYARIWVQMPPADPAWDA
VNDRIGRAAAAFMLETAGLHGA
>AHV93966.1 ribosomal protein S3 [Bordetella holmesii ATCC 51541]
MGQKIHPTGFRLAVTRNWSSRWYADDKAFGGMLAEDIRVREYLKKKLKSASVGRVVIERPAKNARITVYSARPGVVIGKR
GEDIENLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSISQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGI
EIARTEWYREGRVPLHTLKANIDYGTSEAHTTYGVIGIKVWVYKGDMLANGELPPETAAPREEERRPRRAPVAIVRMVPA
TAVRVVVLPVRRTRLRRLKENNHAATVSQKVSQRAKGPQYRPGDSRRQRVLRRIRPEGHRPWPSDRPSDRSCSSCHQPSH
QARWPYLDSYFPG
>AHV93967.1 hypothetical protein D560_3892 [Bordetella holmesii ATCC 51541]
MILQIKVHLANLAQQASGVEQHCLASRRRRHASGAADQQRCPYALFQQREPSTCG
>AHV93968.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MSLFSLLGALEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVAATLISMGLDPFMATLAATAAGAVAGLITGWLN
VRLRIMDLLASILMMIALYSINLRIMGKPNVPLITEATVFTVLQPDWLSDYVARPLLLLVVVVLVKWLLDWYLSTQSGLA
MRATGSNGRMARAQG
>AHV93969.1 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MGGHILVDQLFAHGVKHVFCVPGESYLAVLDGLHDASIEVTVCRQEGGAAMMADAHGKLTGEPGICMVTRGPGAANALAG
IHIAKQDSSPLILFVGQIERGMREREAFQEMDYRAVFGTQAKWVTEIDQVERIPELISRAFHVATSGRPGPVVIALPEDM
LVEMADVPDAPHYEVIDAAPASDQMDTLTQMLASARKPVAILGGTRWDAQAVAQFADFARAHALPVGVSFRRQMLFPADH
PCYVGDVGLGINPALLARVREADLILLVGGRMSENPSQAYTLLDIPVPRQKLVHVHPDSAELARVYRPNLAVNVSPTAFC
AALASIPAPEAAPSWAADTERMRQNYLAWSDPSQIKTPGSLQMGEVMAYLEDALPPDAIMTNGAGNYASWLHRFHRHTRY
ATQLAPTSGSMGYGLPAAVGAKRIWPDKTVICFAGDGCFLMHGQEFATAVQYDLPIIVVLVDNGMYGTIRMHQEKHYPGR
VSATQLKNPDFADYARAFGGHGERVETSAEFGPAFERARASGKPAILHCLIDPETISPSTTLEKIRAAALEAKA
>AHV93970.1 phosphoribosylaminoimidazole carboxylase, ATPase subunit [Bordetella holmesii ATCC 51541]
MSQSRSKTFLAPGAWLGLLGGGQLGRMFCHAAQSLGYRVAVLDPADECPAGMVADMHIRAAYDDAQGLKALADRCSVVTT
EFENVPADSLRMLAARCRVSPSGEAVAVVQDRIAEKTFIAAQGIPVAPHAAIGSKDDLLSASDALFPGILKVARLGYDGK
GQARVSNRAEALSAYAEFGGVSCVLEALLPLDHEISVVIARGFDGTSVVFPIARNVHRDGILAVSSVGGLESGEVQQQAR
EAAQTIAQGLDYHGVLCVEFFVLQNGDLVVNEIAPRPHNSGHYSMDACITSQFEQQARVMAGLPLGSTALLRPAVMLNLL
GDIWYEGSISREPAWDEALAVDSAKLHLYGKHDARFGRKMGHVTILGETLEQANHDASRVARALGLPDVGHD
>AHV93971.1 thiamine-phosphate pyrophosphorylase [Bordetella holmesii ATCC 51541]
MSQTRFPAGLYGVTPEWDDTARLLKAVQEAAAGGMRALQLRRKHLPQAERRAQARELAALCRELGVVFLVNDDWQTALHV
GADGAHLGHDDATLADVRAAAPGLILGVSCYADLNRARDLMDQGADYVAFGAVFPSSTKPEAVHAPLALLAEAAALTRTH
GQPRPAVVAIGGITPANAGQVVRAGADSIAVITGLFEAPDIRAAAQACAAPFPSSRG
>AHV93972.1 heme ABC exporter, ATP-binding protein CcmA [Bordetella holmesii ATCC 51541]
MAQNTLISLTNVQLAYGHHPLLDHADFAIQEGERIGLIGRNGAGKSSLLRLLDGRNQPDDGDISRSSGLRVVTVEQEPIL
DETRSVYDVVCDEEANPEDWQRPARVRATLEKLGLPTDALIAGLSGGTRKRVALARALVDQPDLLLLDEPTNHLDFEGIA
WLEELLRTWKGAAVIITHDRRFLDAIATRIVELDRGRLLSFPGNFSQWQERKAQWLEAERLEQARFDKLLAQEEVWIRKG
VEARRTRNEGRVRRLERLRVERADRRERMGNVNLAVAQGQRSGKIVSELRDVSKTFGDKAVVRDYSTTILRGDRIGIIGP
NGAGKTTLLKLILGQLAPDSGTVRTGTNVEVAYFDQMRAQLDENAALADIINPGSEWVEIGGTRKHVMSYLGDFLFSPAR
AGSPVRSLSGGERARLLLARLFARPANILVLDEPTNDLDIETLELLEELLQDYAGTVLLVSHDRAFLNNVVTQTIAYEGD
GHWRDYVGGYDEWMLQRPAPVASQIDSAPATAPAAPAPRAKPARSAKISSWELRELEELPDVIAALEAEQGALSAKLADG
SLYREAPDEVERIQTELARIEKDLEAKFSRWEALEERRGAGA
>AHV93973.1 diadenosine tetraphosphatase [Bordetella holmesii ATCC 51541]
MIGDVQGCCTPLQQLLAHPDIAGDPDSHFWFAGDLVNRGPESLATLHRIMALDERAVAILGNHDLHLLAAAAGVRKPSRS
DTLNDILNAPDAADLIDWLRHRPLAHYAHDHLMVHAGVLPKWDVQKTLALAAEVEAALRGPNWQKALQKMYGNEPVTWKD
DHKGGKRLRVIINALTRMRLCTPAGHMEFDTKVAPGAWPQGLVPWFDVPRRATRDVTIVFGHWSTLGLLIRPHLICLDTG
CVWGGALTAMRLQDRKLVQIKCSQFQDPLSE
>AHV93974.1 type I secretion outer membrane, TolC family protein [Bordetella holmesii ATCC 51541]
MRVRTVAAVLTLFCATATGASAQDLMQVWRDALARDPIYAAARAAYRANNEKLPQARAGLLPQLNAEAGGLYNEMRSTRS
LSYDSSGGRGTWDLVLTQPLFDWSRWQRFEQSKLVVADAEVQLQQSLQGLLLRVADAYFGILRAQDALSATEAEKAAIAE
QLAAAQRKFELGTATITDTYEAQARYDLVMAEELRLQNAVQNQRDVLAKIVGQAPGALAELPPTVALPAPVPARLSDWSQ
QAQDASLDVLRAQLQTRIAGHDIEIARSGHYPTLNLRASSGSASDGALRGPGPGRPIDNSVGVTLSIPLYAGGGVSSQVI
EKVQLEQKARQDYETARRESLRAAREYFNGVITGLARVRALEAGEKSSRAAVQANQTGYELGVRINLDVLNAQQQLYATQ
RDLAQARYQTLLDGLRLKATSGMLVETDLDAINRLLRSPSP
>AHV93975.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MLYRVLQRLAVVGLISVAALSGTVAATASWPQKPVTLVVPFPPGGSTDVLARLFAATLGERLGQSVVVENRPGANTGIGA
AAVARAAPDGYTLMITGAPTFTTNWLLYPNIGYDPVKSYEYVAIAGSAPFVILTNPQTGLTSVADVIKAKDAQSFGSFGT
ASTPHLAGEFLAQRTGAKLLHVPYRGSAPAMTDLIGNQIPLSIETLVAALPQIRAGKVRALALTGAQRSSLVPEVPAVIE
SGVPDYDFMTWFGLVAPRGTPAPVVQHLAQEVQAMLAEEGTLAKMRELGFEPFYADAAAFHTRVERELKRNAEVIKSAGI
KVE
>AHV93976.1 hypothetical protein D560_2806 [Bordetella holmesii ATCC 51541]
MRLEWLRHIPVRWRAAALRLGFNLHPAFRATGGRVIEVARDYRSLRLRLPLNRHTRNLVGSIYGGALFAVTDGAHPTLLM
LALGREVIVWDKAASIRFRRPAYETLYAEFHLTREEIAQIRTLLDSEHETTRLYTVELKDAAGEVYAVVERSVYLADKDF
YRQKTSGAVPWSTPTDSPACASSSEEDSAASSSGAHPLPVPPAR
>AHV93977.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MVIGPSGSGKSTLLRCCNGLEVAQKGTIEICGHALLDHGKQLPEAQLNRMRMQVGMVFQSFNLFPHLSVLDNVTVGPRTL
RGLTRHDAEQLAHDLLAKVGLAHKTSAMPGSLSGGQKQRVAIARALAMKPEVMLFDEPTSALDPELVGEVLQVMKLLAKE
GMTMMVVTHEMGFAREVADVVAVMDGGVILESGPPETIFSNPREPRTREFLQAVLSSQS
>AHV93978.1 putative multiple antibiotic resistance protein [Bordetella holmesii ATCC 51541]
MNPAKPDPAAPSNVHYRADTVTASEDNCGFLIKLVHQSLNRMLDQEMAPLDLTAMQWRPWRSSSAAAPIRPPSWHASSAW
TRAR
>AHV93979.1 DNA/RNA non-specific endonuclease family protein [Bordetella holmesii ATCC 51541]
MYAGQPLRSMTRTRKPASRTRRRSPAARPASRLYRFFRALFVSSIVSFGAATIALGPKFSMSPADPLGRLGWPHQTEVAA
LPGDTAEVVQTRFSDCPEFFPPGRMPAVPARSGLRELCFSSFAILHNGQTKTPVVVAERLNRAHVTQAQGLQRTDKFYAE
ARLPVGERAELTDYRGSGYSRGHMAPAGDMASAEGMAQSFSLANMVPQDQKHNAGAWSRIEQDTRKYALRAAGDVYVLTG
PVYSAKPEHIGRGVAVPQTLFKVVYDATTHHAWVHWQDNNSATKAQAPISYAEFVERTGMQLLPSSAR
>AHV93980.1 asnC family protein [Bordetella holmesii ATCC 51541]
MDADKVGLGLLAYVTIRLNKHVGGSHASMADFHRDVLLWPEVVECYAMSGDMDYLLRVQVQDLAHFSRFAMDTLMLHPAV
VDMKSFFALQQVKETTELHV
>AHV93981.1 methylated-DNA-[]-cysteine S-methyltransferase family protein [Bordetella holmesii ATCC 51541]
MYSHDYLSPLGPLLLTSDGHHLTGLWIAGQKYHGGSIRAPLTPAPDRAEFKRVEHWLDAYFRGAKPALADLDLAPQGTPF
RQCVWQALREIPYGQTTTYGAIARQIAEQTGNRPVAGQAVGGAVGHNPISIIIPCHRVVGSSGSLTGYAGGLHRKLRLLA
LEGVDTTAFFLPRKSTAA
>AHV93982.1 ferric uptake regulator family protein [Bordetella holmesii ATCC 51541]
MDQTPLHRTGMKATYPRLKILDMFQRYPERHMSAADVYRQLLGEQVDIGLATVYRVLGQLAHAGLLARNQFDAQTSVFEL
AAKGQHDHLVCTGCGTVAEVSNATIADQARRIAQRHGFALQSYSLALYGRCTQCRKVIKGVFE
>AHV93983.1 glycine zipper 2TM domain protein [Bordetella holmesii ATCC 51541]
MSTTISSSVSAGRIARGIVVLTLAAGMVTLAGCANRSASAGVYSYDQAQREQIVRTGTVTGVRPITIQNDKSSGVGLVAG
GALGGVAGNAIGGGTGRTIATVGGALLGALAGNAVENRVGKNSGYEITVRLDNGETRVVAQEADVPVSVGQRVQVISGSG
PTRVVPY
>AHV93984.1 AAA domain protein [Bordetella holmesii ATCC 51541]
MKTHAREWVGLDKANCFLFCSSDNGVAQQLGQAVGDLGMLTQESPSLDVLAQRLAEINPQVVFLDFTGGQAQPGKLLMAS
DMARVLMRVAPSLPRVAVGYLSEPDGAIAALRAGVSDFVDPSVSPDEVQAVVQRLLADCRQAGGNGSSHRSVLVLGARPG
VGASTLAVHAAGLAQQHLAQIALSRQHAQGGKAHGKGELLAAQLPLNERVCVLDLGWPIGDCLLYLNINSDFDFAEAVRN
LRRLDGTLLSSTVAHTAAGISAMTLPRDMAQVRTLSPADSLSLFERLRQHYGVLVTDAGGFSNPDFTAKLARSSHEVWLV
TDQSVSSLVSLAGVLQELEQQHVPRDTLKLVVNRYDERYGMTSMQIAERFGLALAGTLPDRTMPLMLCTNQGRLLYQQAE
RDIYVRAVQGLVDRMLAERMAPGARQGWLAAWLPGVHKRMMLH
>AHV93985.1 putative spermidine synthase [Bordetella holmesii ATCC 51541]
MSRRNQPSALDQPSLSDADGVRYLHFGSEWIQGTMRIKNPAELVLEYTSQMMAWLLFLEPPREQSIGLLGLGAGSLARFC
LKHTRSHIDVVEWNPQVTAVCQMFFKLSTPARLDVHHEDAAVWVADPLNVGRSQVLMVDLYDAKAEGPVRDSVGFYRDCR
RVLGEVGVLAVNLFGRHESFGRNIDNLSKAFDDRIILLPEIDAGNQIVLAFSGLPLAVTPAELLARAEVVESRYGLPARR
WARTLAGHAVDGILHL
>AHV93986.1 sporulation related domain protein [Bordetella holmesii ATCC 51541]
MTRAEVNGVQINRVRVGPFARLDDMNRARSRLGEDKIESTVVKQQ
>AHV93987.1 cyclic nucleotide-binding domain protein [Bordetella holmesii ATCC 51541]
MLKRVPITPDAAHCSSCMLGHVCIPIGMAAAEVEKLDDLIKERVRIEKGHTLYELDAALDAVYGVRYGSLKTQLEDASGQ
LQITGFHLPGEIVGLDGMLESRHVSNAVALEDSEVCVIRLSEIDRVAHHLPSLQQQFRRLMSREITRSHQMLATLGSMRS
EQRLAAFLLNLSQRYAALGYSSTQFVLRMSREEIGNYLGLTLETVSRLFSRFAREGLIRINQREVELLDLPGLRQLLGHE
HC
>AHV93988.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MVGQAIIRDCYQGAAAQRSMSYLILVFNLSPALAPVIGGQLAVHHGWRSIFFMLGLLAATALTLCAWRLPETLAPAKRQT
LSLRGLAAGYREVLRNGNFTAPGLAFSLVFAAQGLLIGAAPDFIANVLDLPETNFAYLFVPLVAGAMTGAAIAARHAGRW
RDTRIIGLAYLLMNGSCLAYAIYFWTALSPALPWVVLPPALFTCGLAMSVPAMTLHILESVPALSGTGASVLGFMQMLAF
SIASGWGVPLTYGQPSVLALAMLACVTASALAWAWLQHLSRISTKVQAR
>AHV93989.1 asnC family protein [Bordetella holmesii ATCC 51541]
MTPSTTALPVLDDLDRRILEQLQRDSALTNQELALRVHASPPTCLRRVRRLTDTGIIARQVALLDATRLGSSLTAIVEIT
LDVQAAERLDEFEHLMLAEPAVLQCYRVSPGPDFVVIVLVRDMPAYHALAHRAFTAHANVRNVRTFFSVHRAKFETRVEL
PPATPAA
>AHV93990.1 phosphonate ABC transporter, permease protein PhnE [Bordetella holmesii ATCC 51541]
MLAVALVVYAVYAATQLDFNWTRIKHGMDHASTFLARMVPPNFEKPATLWKGIAESLEIAVLASLLGIVLSLPVGLLGAR
NMMPAWVSWPARALVALCRSLHPVIVAILFVKAVGFGALAGILALTLASIGFIGKLFTEAIEEISLKQVEAVRATGAAFP
NLIIFGVLPQVFARFVGFSTYQFDSNLRNSTMVGIVGAGGVGGTLFSAFQRFDYDFVSAILITLIAIIMLGEMLAGMVRA
VFLEGWSFDRLLVKRFNGARGLSKPEGRP
>AHV93991.1 queuosine biosynthesis family protein [Bordetella holmesii ATCC 51541]
MLVERITEPTRALAHVRASKSPGPGMRLELAGGAITADVLGRAGELFDLRFAAPVLDLLEAHGATPLPPYITHAAEQEDD
ARYQTVYAREPGAVAAPTAGLHFDQAMLQRLADQDVQRAFVTLHVGAGTFQPVRVQKLEDHIMHSEWYTVPEATVAAVAR
ARQAGAA
>AHV93992.1 HAMP domain protein [Bordetella holmesii ATCC 51541]
MTFKLSHALPRSLRTRLILLVLGSVLLAQAATLGTISYYRHKFIEDVAIGYIATTIRTLRAALAQVPSEDRAEFVRAASQ
NQWRWWARGLPAEARLQRLNRPPPDRMGPDGMMPPPDGPPGMMHRRFDDDDSDRRHRPPPPPHDDVRRDLRQLVQELNLR
LNDGTRVALSRGPRPEIFISLAPNTASEDVPALREWLVIPLDRLDPPVATPMVAFWLGGLGLVLLLAAWFSWHITRPLTR
LADAADRLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMTDDPTLKDGLR
KDLQDMQHMVDQFIGFVRGTDPAAYRYAPLNLNEWISERVQSWKGAGTDISLTAADDDSLTIQGDAVALGRLLDNLIGNA
LHHGAPPIDVRLLNDAHSAIIEVADHGEGIAPQRRAEALRPFARLDGARTRTGNVGLGLALAEAIARAHGGDLELDSGSS
GGLLVRIRLPRA
>AHV93993.1 asparagine synthase [Bordetella holmesii ATCC 51541]
MCGIVGLWGPLEGKAQILAESCHRIRERGPDSKGFWGDPQAGVAFGHVRLVIQDLTEAGHQPMVSACGRYVLTFNGEVYN
HMEMRAELERAGHAPAWRGHSDTETILAYAATFGVQDMLRAAVGMWAIALWDRETRTLTLARDRMGEKPLYYGYVGATLV
FSSQLKGLSPVPGFGRQIDRNALASFMRHNYVPAPQSIYEGIRKLPAASLVEITEAQMGRREMPAPQTYWSAMAVADAGQ
RLPRLFANDNEATDALQDVLMQAVRGQMLSDVSLGAFLSGGIDSSTIAALMQSQSNVPVRTFAIGFHEKEYDEAPYAKAV
ATHLGTDHSELYVSAQDALDVVPGLADIYDEPFADSSQIPTALVTRMARQHVTVALSGDGGDELFGGYSRYPRVANWWEK
CARMPAPLRHMVGGLMRASAGLPGGGAWRGKVGKMGDLLRADSEGEFYRLFVSYWSDPARVVKGATEPASPFEAPLAGPL
YEAMMKLDTITYLPDDILVKVDRAAMAVSLETRVPLIDHRVYEFAWSLPFDYKVRGGTGKWLLRQVLHRHVPQSLVERPK
RGFAVPLAAWLRGPLRDWAESLLDPVRLRQEGWFEPEPILRKWREHLSGHRKWDSHLWGVLMMQAWLDRYHRNGSDGER
>AHV93994.1 oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Bordetella holmesii ATCC 51541]
MTLRDILKALRDTYCRSIGAEFMYVSDPAAKRWIQQRLESTLAAPSFSTEEKRHILQQLTESEGLERFLHTKYVGQKRFS
LEGGESFIASMDEVVNHAGESGVQEIVVGMAHRGRLNLLVNTMGKMPGDLFAEFEGKHAEGLTDGDVKYHNGFSSDVSTR
GGPVHLSLAFNPSHLEIVNPVVEGSVRARQERRADHEGKQVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTLHIVI
NNQIGFTTSDPRDSRSTLYCTDVVKMIEAPVFHVNGDDPEAVVFATRLALDYRMQFRHDVVLDIVCFRKLGHNEQDTPSL
TQPLMYKRIGHHPGTRKLYAEKLTTQGVLAEGDADQMVKDYRQLMEDGQRTIEPVLTDYKSTYAIDWSPFLSAKWTDQAD
TAVPLAELKRIGERITTVPEGFTVHPLVAKLLNDRRNMAKGEQNLDWGMGEHLAFATLVASGYAVRITGQDSGRGTFTHR
HAVLHDQNRERWNDGTYIPLQNVSEGQAPFVVIDSVLSEEAVLAFEYGYSSAEPNTLTIWEAQFGDFVNGAQVVIDQFIT
AGEAKWGRQSGLTMMLPHGYEGQGPEHSSGRIERFLQLCADNNIQVVQPTTASQIFHLLRRQMIRPFRKPLVIFTPKSLL
RNKDAGSPLTELAGGSFRPVIGEIDDSIKANSVKRVLACSGKVYYDLVNARREREADNVAIVRVEQLYPFAHKAFETELR
KYPKATEVVWVQDEPQNQGSWFYVQHHLYENMTEGQKLGYAGRAASASPAVGYLAKHQEQQKALIEQAFAPKFKGFMLTK
>AHV93995.1 thioesterase superfamily [Bordetella holmesii ATCC 51541]
MSRSYVSEVEILFRHFDPAGIVFYPRYFEMINDFIEEWFDKSLGVSFHTLHTERGIGTPTAAVQCDFKLPSRWHERLRQV
LELQHIGGSSFLAQVRFEGQDGKMRLSAQVTIVTVDLARMRATALPDDLRAAMQEFLSPAQA
>AHV93996.1 istB-like ATP binding family protein [Bordetella holmesii ATCC 51541]
MRFDKVTTKFQQALADAQSLAARNDNPYIEPVHVLAALLADADSGAGSLLARAGVAVNRLQPALETAMRALPQVAGDDNV
QISRDLQAVLTRTDKEAARRGDTFIASELFLLALADDKGEAGRILREAGLQKKALETAIDAVRGGEKISEAEGESNREAL
SKYTMDLTERAREGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLTQRIVNDEVPETLRGKRVLSLD
LAALLAGAKFRGEFEERLKAVLKELSQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRK
YIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASRI
RMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLAVIEEELERLQREYNDYEEIWKAEKAAVQCTQSIKEEIDR
VRADMAELQRKGQFDKLAELQYGKLPELEARLKAADMAEEDVERAEVAGGKPRLLRTQVGAEEIAEVVSRATGIPVSKMM
EGERDKLLHMEDALHQRVVGQEEACSLVADAIRRSRAGLADPSKPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRI
DMSEFMEKHSVARLIGAPRAMWVTKKAAISRKPCAANPTAWSCSMK
>AHV93997.1 phosphoribosylamine--glycine ligase [Bordetella holmesii ATCC 51541]
MVDVFRARGLKIFGPTKAAAQLESSKDFAKAFMVRHNIPTARYQTFTDPVQAHAYIDQEGAPIVIKADGLAAGKGVVVAA
SLEEAHAAIDAMLGDGSLGNAGARVVIEECLVGEEASFIVMVDGRNVLALATSQDHKRLQDGDQGPNTGGMGAYSPAPIV
TPELHHRIMREIILPTVQGMARDGIPYTGFLYAGLMIAPGDDPDRSIKTLEFNCRMGDPETQPIMMRVKSDLLEALEHAV
DGTLDQADIIWDRRTALGVVLASHNYPGTPRTGDVINGLPAETDDCMVFHAATERDGDQIKTTGGRVLCVTALGDSVRIA
RERAYEAVNAIHFDGRQYRSDIGWRALKPSQQKSKA
>AHV93998.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLQVKDLAKAFGGVRAVDGISFELRAGELLALIGPNGAGKSTLFNMLGGQLPASAGSIQLAGRELVGRKPREIFRLGVGR
TFQIAATFASITVAQNVQLALLSEKRQVFAFGRAACDQHRTEALSLLAQVGMQEQADRPCSELSYGDVKRVELAIALGGE
PSLLLMDEPTAGMAPGERLSLMALIRRLVTERGMAVLFTEHSMDVVFGYADRIIVLARGRLIAEGSAKEIREHPRVQEVY
FGTGSTFAAQGERA
>AHV93999.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MSLRKTENLQQSESGLSLLQGLFILAIIGVVTTVIVSSFN
>AHV94000.1 cytochrome c' [Bordetella holmesii ATCC 51541]
MKKLTAIVVLACTAAAAPAAAQFAKPEDAVKYRQAALTVMASHFSRMQPVVRGQAPYDAAQIKANVDILKTLAALPWAGF
GPGTEGGGAKPEVWSDAAGFKEKQQRFIDNVDKLSVAADSGDLAKVRAAFGDVGASCKACHDAYRKK
>AHV94001.1 PBP superfamily domain protein [Bordetella holmesii ATCC 51541]
MRNTGFFVMAGNPKGIGGVEDLARADVRFVNRQMGSSTRYLAHLLLQRHGIDIARVQGFQTNEFTHMAIAAHIASGMADV
GMGVETAARRFGLDFIPLVQERYFFALRRADLEQPAMQDFVTALRSPAYLNDIGALPGYDAADCGRLLTLAEAFP
>AHV94002.1 dihydrodipicolinate synthase domain protein [Bordetella holmesii ATCC 51541]
MLARQGLMHETLRAPMAPASLALIVQLEAAVDELQRRYPGN
>AHV94003.1 glutathione transport system permease protein gsiC [Bordetella holmesii ATCC 51541]
MLTYIVKRLLGMIPTLLLVAVVVFLFVHMLPGDPARLAAGQEADQATVELVRKELGLDLPLPQQFVRYFSHMLHGDLGVS
LRTKRPVATEIAERFMPTLWLTITSMIWSVTFGMIFGIVSAVWRNRWPDRLFMTLAVSGISFPAFALGMMLMQVFSVNLG
WLPAVGASSWKHYILPSITLGAAVAAVMARFTRASFVEVIQEDFVRTARAKGLTERRVVIKHALRNALIPVVTMMGLQFG
FLLGGSIVVETVFNWPGLGRLLVDAVTQRDYPVIQGLVLLFSLEFILINLIVDVLYGVINPSIRYK
>AHV94004.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Bordetella holmesii ATCC 51541]
MTVSIHPDSYLTLHYRVVLASGPAEGSVFTDTFDGRPATLQMGGGQWAPGMEAGLLGHQEDERFSFTLEPAEAYGDRNPE
LIQKVTRRMLAEHAGADTSFSPGDLVEFAAPNGGRYSGVLKEINDDWAMFDFNHPLAGIRLRVDVHILGVL
>AHV94005.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MKGPNKTLRNVALGVGYLFLYVPILSLMVFSFNESPVVTSWTAFSFRWYGSLFHDEALLRAAWLSFKIAALTATAATIIG
TWAGYVLARMGRFKGFGLYVGMLSAPLVIPEVVLGISLLLMFVEMRGTLSWPAQNGIFTIWVGHVTLCMAFVAVVIQSRI
RDMDRSLEEAALDLGATPIRVFFAITLPLIAPALASAWLLSFTLSLDDVVLASFLSGPGYSTLPMEVFSRVRLGLKPEVN
ALATLFILAVGTCVIIANRMQARREITT
>AHV94006.1 acyl-CoA dehydrogenase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MPESVSSIGKELAGPIIMAVGTEAQKQAFLPNILAMKQYWCQGFSEPDAGSDLARLRTKAVQEGDHWRINGQKIWTSGAA
KAHDCLLLARTGTVADKHRGLVMFAVPMDTPGIRVAPIKSIDGKSSFAEVFFDDVVVPDSARLGAPDEGWNAAIRVLSIE
RATNRMYRPWRFECELRQLIAACKSDRQLAVTLDDGYFQRRVGDLVGQIDGLKGLVELTVERMMRGETIGARGSLTKLYW
SECHQAFADLALSGTPHATTLVRAERLAGIAWQGSVQSGHARVDQGPVDWLLVADGDGASLLDLSAAVGQDQACLDPKQP
QTWFELQGTPVLARLDAAAWVALQHRARILLAEFANGAAEGALQAAATYMATRVQFGRPLSTKQAVRHLLARMRLLQDVS
SAAIRRATLCDEYGAQRDDRPALVGALGNAAYVIEKAIHLHGGMGFTWELPLHRALRAVRKLDAAFGGLSRDTGRAYIQS
V
>AHV94007.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MAGAIRAISVAPLVIEYNSIARNEYRRSAPTKYLIECMSRKRFPRAASGLVAVTQELVDDVPAVGHALRTVISNGYDFGR
VVPRTPPSNQRPQLLLVGSPGQDWHGVDKVIRMAVLLPEFDFHLVVPGLAQSGPANVHFHGGLYGEALAQRYAQTDVALG
TLALLRKGMRQAAPLKTREYLAYGLPVIAGYEDADLRGAPYWLDIGNTESKVEDAVQAMRDFVLHWQGRILDRADARRRL
DYAVKEVERLAFFEQVRRHVR
>AHV94008.1 hypothetical protein D560_3627 [Bordetella holmesii ATCC 51541]
MLPFLFARALWPSLDETHRRELMQADAVVIEAAAERSVEVDGVFLQKNLVVRHLVRELGDIGMQWWRSLLRCGAVSPDEY
ARAMGEYRQLADPAMLAPGERVLRRARCETDTESHVREDLRYASRVLGKPVLVVTHVDLPRSDGRPILSRSHHVARVKAA
CAGLAGLHVVDPLDCAQGLGRAQILDRDGEDLNHYCPAFETLLAEHLYQQANTLLGTDLR
>AHV94009.1 SLBB domain protein [Bordetella holmesii ATCC 51541]
MTRVPYQQLLNGHNIALDPRSEVVVEPNLKRFVAMGAITKPGLHELPSKRSNLLDALGVAGGLNDRAADATGVFVFRLDG
LDPAGQSRPTVFRLNMRNPESMFLAKQFELRPEDVVYVSNAPMYEWEKIITPIVQVLIVGQRVGAN
>AHV94010.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MLTLRHIEVFHAVMRTGSVTGAARLLNVSQPAVSAVLKHCEARARIRLFERTGRRLVPTAEAVALFPDVAAIYGRLDSLT
RQMQDLAGGRIGALSVAGPFRSPMVIWPRPWPAFWWNDPACGSHCSR
>AHV94011.1 exodeoxyribonuclease VII, large subunit [Bordetella holmesii ATCC 51541]
MTIGFAVKDDVFARDIFSVAQLNQAVGQLLEREIPPIWVRGEVSNFTQAASGHWYFTLKDARAGVRTVMFRSRAAAVGFV
PRAGDEVEVRARVSLYEPRGDFQLQADAMRRAGVGNLYEAFLRLKDKLAAEGLFDPQRKRSPLRLPRAIGVVTSLHAAAL
RDVLSALARRAPQVGVIVYPAPVQGADAAARLTSQVRAASARREVDTLLLVRGGGSIEDLWSFNDEDLARAVAECAIPVI
TGVGHETDFTIADFVADVRAPTPTAAAELACVPRADLLAALGHVTTRLARAQQRRLDQAGQRLDRLSAQLISPAQRVANQ
RERLNTLRHRLASAAKRPLSLSDARLSILTQRLARRAPQMARSLDRVQGLTQRLARGQQALLAERRARLLALAAQLRALD
PENTLARGYAIVRDAQGQVISQAGALAVGAAVSIDLAHGRVGADITSIESSR
>AHV94012.1 flp/Fap pilin component family protein [Bordetella holmesii ATCC 51541]
MLAQLSSFWRDEDGATAIEYGLIAGLIAVAIITAVIEVGDGLNGLFGRISTALTTATDAP
>AHV94013.1 oxidoreductase, NAD-binding Rossmann fold family protein [Bordetella holmesii ATCC 51541]
MSVLHVGVAGFGAIGQAVAQALDQGLPGLRLAAIAVRNPARYENRRWQSDKPAFTDLPGLAERCDVVVEAAPAAVFRELA
EPVLRAGKKLLVLSSGALLRNEDMIDLARQHGGQIIIPSGAILGLDALTAAAEGQIHSVTMITRKPPLGLAGAPYLQTHG
IDLSEITEPTLVFRGSPREAAIGFPANLNVAVSVSLAGIGADRSTLEIWADPTVTRNVHRVEVDSDSASFSMEIQNIPSE
NPKTGKITAQSVVAALRKLTAPLRVGT
>AHV94014.1 acetolactate synthase, large subunit, biosynthetic type [Bordetella holmesii ATCC 51541]
MELNGADIVVRCLAEEGVEHVFGYPGGAVLYIYDAIFKQDKFQHILVRHEQAAVHAADAYSRASQKVGVCLVTSGPGVTN
AVTGIATAYMDSIPMVIISGQVPTAAIGEDAFQECDTVGITRPCVKHNFLVRDVKDLAETMRRAFFIARTGRPGPVLVDI
PKDITVAQCKYAPPKGEISMRSYAPVNKGHQGQIKKAVQMLLHAERPMIYTGGGVILSDAAEALRHLVDQTGAPCTNTLM
GLGAMPATDHRFLGMPGMHGTYEANMAMQHCDVLLAIGARFDDRVIGNPRHFAQNARKIIHIDIDPSSISKRVRVDVPIV
GNVKDVLADLSAQYDLARADAKPAPIEKWWQQIEAWRGKECLKYAGSDEVIKPQFVVEKLWEVTGGDAFVTSDVGQHQMW
AAQYYKFNKPRRWINSGGLGTMGVGLPYAMGVQMANPGADIAVITGEASIQMNIQELSTCHQYHLTPKIICLNNRFLGMV
RQWQQIDYGSRYSESYMDSLPDFVKVAEAYGHVGLRIERPADVEPALREAFKKHKDRLVFLDFITDRTENVWPMVKAGRG
LTEMLLGSEDL
>AHV94015.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein [Bordetella holmesii ATCC 51541]
MLARIPAPVRERATAVRLMVFDVDGVLTDGSLYFGEHGEMFKRFNALDGHGLRLLMESGIRVALITGRSGPVVDRRAAEL
GISEVLQGIRDKGAALTELAQRQGVQLDQTGYMGDDIIDLPAMHRAGFAASVHNAPAYVTQAAHWVSALPGAVVRCANAA
ICCWPPRAAWPLF
>AHV94016.1 3D domain protein [Bordetella holmesii ATCC 51541]
MSLLSALLAACSTTTEIPPEDGGRGSSPAAETGLTVPAVSALPDTPARALAGHYQRAAWSELPGWETDDLSRVWPLVVRN
CKGLMRPTSGNLAAPARATPRAWQPVCAAVADPARAPAPGDAAAVRRFLQTYLQPWRLNGTDGRAAVNTVTGYYEPLVRG
SRERGGRHQWPLYGVPEDLLTIDLGAVYPELAGKRVRGKLDGRRVVPYDTRAGIEASSRKPPVVVWVDDPVDNFFLQVQG
SGRVQLTEGPDAGKTIRVAYADHNGQPYVSIGRWLIDRGEIRADQASMQNIRAWAQRNPARVQEMLNANPAVVFFREEPV
VDPEQGPKGAYAIPLAPGRSVAVDAAFVPLGTPVYLSTSYPASERPLQRLVFAQDTGTAIRGAARADFYWGFGDEAGQQA
GRMKQRGQMWLLWPKQAGEPSAR
>AHV94017.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MTLKQLEAFYWAATCASFAVAAQRLHLSVFSLSKRIVELEETLGQELFDRSGHRAVLTPAGDRLVPQARELLAAADRIRA
SMAVRDALAGRCRFGVGELSALTWLPALIGRVRQAYPSLALEPYVDVGQVLERKVADGELDFAIIAGRSSRAGMASVPVG
EARFVWVGAPRAVGQATHVTPELLRLCPLVSLPEGAGTTRLLQAWLSPLAEAEQRLHCNNWGAIVGMLVEGTGVGLLPEH
WAQALEQDGSLRILSSDPAPGALPYSFQYRRDDSRVLVEKMRTEVMRAVNFSARCRLP
>AHV94018.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MHDLIPQLTQQFFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTNSGMPLPFIIAAMLVVS
IVVTCVYGFSVERVAYRPVRGSPRLVALISAIGMSIFLQNWVALGQGARDMAVPSLVSGALQFRMGSDFEVTVPYSRVMI
IVVTVVLMVALTLFIKYSRMGRASRACSQDMHMANLLGIDTNKVISFTFVLGAGLAAVGGVLIAITIGKLNPFIGFLAGI
KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFGLLVLILLFRPTGLLGKPEVEKV
>AHV94019.1 ribosomal protein S19 [Bordetella holmesii ATCC 51541]
MSRSIKKGPFVDAHLIKKVEAAVTGKDKKPIKTWSRRSTILPEFIGLTIAVHNGRQHVPVYINENMVGHKLGEFALTRTF
KGHAADKKAKR
>AHV94020.1 hypothetical protein D560_0512 [Bordetella holmesii ATCC 51541]
MFGFFKKQAPEPNPEVQAEFGERVNAAAADFLAALPDASRFDYLPASVALLDSVAAQVRAGEFSLTPMQRVGMAAYLYEV
ARRSHGGQYEVCDNDDLVVLVTGQPDFDVCLCGISRVERTLSGKEDEPLLAFYRRYEAAVSAAAPATLR
>AHV94021.1 putative sigma-E factor negative regulatory protein [Bordetella holmesii ATCC 51541]
MIGDALRSSDLVINPSKDFQSRLARALDAELPIVAAPRRRSPLRFGLSGLAVAAAVATVIWVAQPLVSSGPSLSTPVLAD
ASRDDPGLRDYLEAHRQMAGPSAVRQVSFETGAR
>AHV94022.1 hypothetical protein D560_0629 [Bordetella holmesii ATCC 51541]
MSQVQWRSTERTFGAPAGSRRCHSNPMFSWIVRIALETGMRLFKIGGLRMS
>AHV94023.1 hemin-degrading HemS.ChuX domain protein [Bordetella holmesii ATCC 51541]
MNHVSFDQRAHDLRARHDAYAASQPAQRARNAAQALGVSEAEWVAAGCGGARVTALNGEAQAIFRELGTLGEVMALTRNE
WCVHERHGRYEDIQAQGAVGLVLGPDIDLRVFFNCWRSAWAVEQDGRHSLQFFDAEGVAVHKVYRTESTDLAAWQALVDT
FAAAPVWPVPQPIAATAAEDRVADPQALRQAWLAMKDTHEFFPLLRKFNVVRQAALLAAGTDLAQQVPADAAERMLTQAA
ASGLSIMCFVGNRGMIQIHTGAVHNLRRTGPWFNVLDPRFNLHLNTDAIAQAWVVNKPTSDGWVTSLEIYASNGDLIVQF
FGERKPGKPELPAWRELMTGLCAEPLAA
>AHV94024.1 putative membrane domain protein [Bordetella holmesii ATCC 51541]
MMSEPTQHQVSVPEFNNLLVQNHILASQITAVVPILVGLSHTPPAVQQALDAMMDLLDPARKPPAALPAQFDTEDEQAAL
AYPLKQMLRACVMIRQELAGVADPEDPRPAPASP
>AHV94025.1 C4-dicarboxylate transport sensor protein dctB [Bordetella holmesii ATCC 51541]
MILLAATQWAESRALREVAARADATTQLNTVALRSSLEKFRAVPHVLARDAEVHQALTERRQSAVEILDAKLAEISHAVG
SSAIYILDRQGVAVAASNWREPATFVGVDYQFRPYFQRAMADGQAEYFALGTISHEAGLYISRRIDDVAGHPLGVAVLKM
DFQQQEADWKGLPDPLFVTDEQGVVLISNVPQWQFHSIGPLPAALTERLQQSLQFGQGAVTELPLAPSLADGTAHALTRN
TAAALTMPPGTLLMHSARAVPASPNWTLHTLVPVQASTRRAISNIQLTVVLIMAFAYAGGGLMFYRRRLLRERVRAQLNA
KARLERRVRMRTRQLRQSNEQLVAQIDERQRTETRLHEMQDELVQANKLALLGQIAAGVAHEINQPLSAIRAYADNAQAF
LKRGDPQHTEENLRTIAALTDRIGSITGELRAFSRKGRACITDLPVHQAIDGALLLMGPRLHRQDAVLAYTAAPPELRVR
ADRSRLEQVLVNLLQNALDAATHQPRLTLRVQADADFIRLSLTDNGPGIAPQILQKLFTPFQTTKAEGLGLGLVICQDIL
TECGATLDAANTPEGGAVFEILLRRAPDAPDLTS
>AHV94026.1 phosphoribosylformylglycinamidine cyclo-ligase [Bordetella holmesii ATCC 51541]
MTTENNAPLTYRDAGVDIDAGDALVDRIKPLAARTMRAGVLGGIGGFGALFEVPKKYREPVLVSGTDGVGTKLRLAFDWN
RHDTVGIDLVAMSVNDILVQGAEPLFFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPEGEYDLAG
FAVGAVEKSAIIDGKSIQPGDVILGLASSGAHSNGYSLVRKILERAGARPDQDFDGQPLVDVVMAPTRIYVKQVLAAMAQ
HGTAIKGLAHITGGGLVENVPRILQPGLSAKLNRDGWTMPKLFQWLQQQGAVADAEMPRVFNCGIGMVLVVAADQADAIA
TTLRGQGEVVNRIGEIVAQEDGMARTFVV
>AHV94027.1 his Kinase A domain protein [Bordetella holmesii ATCC 51541]
MLLWLIPALVTILVAGLWLSNQQLREQVDIAYDRALAGALRSIDHNISTASGGLSLELPYLLLEFFELTANGNVYYRVAT
EDGLAEIGNPDLPLPGHPLKSGKPEFFYASYDGQPLRVAALARPMDPPLYANKGGRVIVQVAEGLDTREDFLNRALLRSV
ERDVVMLLISVLAVIWSVLMALRPLERLRDEVASRSADDLSPISASDVPGEVLPLLEAINLHTGRFEAQARVQRQFLDDA
SHQLRTPLSVLRTQTSYALRESDPQEIHTALLAMREGLDRAVRTTNQMLTLARAKDAPWTEGGLPLENVDLAALADSVGR
SLLPAIRMKHIDFGLERPAESVCIRGVEGLLREALSNLLDNALRYSPAGAEVTIRVGSDQENAWICVEDAGPGMSAEDIA
HASVRFRRGAAGKNKPGAGLGLAIVGTIVGIHGGTLRLDNREPAPGLRATLVFSLGFERNAALRQKNWPI
>AHV94028.1 nitronate monooxygenase family protein [Bordetella holmesii ATCC 51541]
MFRPASFLSLHDFEPAAKKRLPRQLYGYLRHGAEDGMAIEANRQAFAGIHLCPKVLTDVSNRSSSISLLGQTYSAPFGLA
PVGLAAMWCYRADKVLAQAAQEHNVPAIMSGASLVPMEEVAQAAPQTWFQAYLPAEQERIQALLTRVRNAGFSTLVLTVD
LPVSPNPEAYARHGFSAPLKPSLRMAWDGLSHPSWLMSTFLKTLFRHGMPHFENWRAERGAPIISARVERDTQGRDKVSW
PHVALARRLWQGPLIIKGILRPDDALLAAKTGCDGIIVSNHGGRQIDGAVSGLDMLPEIVAAVPNLPVMLDGGIRRGTDI
LKALSLGARCVFVGRPMHYAATVGQRAGVEHAIQILKTELHRNTALLGLNHPQEIDQNFVRSH
>AHV94029.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MDLSAQTVLVTGAGRGLGAAIARALAQAGARVIINYRRSQRQAQALAEELGPLSIALQADVTDAAQVRAMLAAAADHTGQ
PVLSVVNNALADFRFDGDARPLLGDITWDRFEGQLSGAVKGALNTMQAALPAMRQAGFGRIVNIGTNLVQNPVVPYHDYT
ASKAALLSLTRTAAQDLGPDGITVNMVSGGLLQTTDASSSTPEAVFELIASLTPLRRVTTPAEFADAVLFFLSPWSRAVT
GQNLVVDSGLVKD
>AHV94030.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLELSSVSKSFGGLHVLHDVNLTVPQGSIYGLIGPNGAGKTTVFNLITGLLPPSGGNIRFNGESLLKRPPHKITRMGIAR
TFQNIRLFKEMTLLENVVVGAYRHMNYGLPGLLLSLPAFRQAERRARERAHELLTWMRLDHKANDIADNLSYGEQRRLEL
ARALATEPKLLLLDEPVAGMNTGERAELMREILAIRDRGYTILMIEHDMRFVMGLCENIAVLNFGKIIACGGPEEIRNNE
QVIEAYLGREDDEDTEQAEAVQ
>AHV94031.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MEAFRAVMLTGSMNGAARLLFVSQPAVSRLISHAEQTLGL
>AHV94032.1 O-Antigen ligase family protein [Bordetella holmesii ATCC 51541]
MFNRFSCWLLIATITAIPTLLLTTSGGGSAAFYLSLLLCLPICATAAQPIALRGYRSLMLAACAPLAVALLNSALHAGWS
SSAVERGLRLAVGVPLLLAAMQAIGPERLKQTLWGVLAAGWAGTITLLSLVGSDLTKRPLTDQYNAVGYGNLLLLLAVLS
LFSLSWRLTRHARWENTVKLLTLVVTFLSFILTQTRSGWVALPVFILLALAVYARIRHPARLVATAIGILAALVALGSTS
PALRGRVDQGVAQYRECQTAPNSNTSVCIRLQLWRAAWAMMLDDPIKGSGPTGFAPRLQELAARNTISPHVAEHFGEPHN
DLLESLALYGIPGGIALVLLYGMPALLFVRRLQRTLPQAVRAAAAMGVAVCLGFALFGLTELMFRGMRTIGFYAVLVALF
AVLSDPRLHHKGTE
>AHV94033.1 aminotransferase class I and II family protein [Bordetella holmesii ATCC 51541]
MSLARRRQLLALARRWGSWIIEDDYDSEFRFSGRPISSLQGLEPDAPVIYLGTFSKTLYPGLRVGYLVLPKNLAAPFQAG
HAELYREGHLMMHAALATFIADGHYSAHIRRMRMLYGRRRAILTNLIERRLGAGWLHRDSSDAGLHLVLTLPDDLDDTVV
VDVARARGVLTRPLSRYYTGTEPARQGLLLGYACVPESQIARKFEVILDSLAEVARRGRR
>AHV94034.1 hypothetical protein D560_0249 [Bordetella holmesii ATCC 51541]
MAFAGHCVRGQGVLTRHGAEARDARRRAEQEGGYGSGR
>AHV94035.1 HAMP domain protein [Bordetella holmesii ATCC 51541]
MSGNGTLTQRVVWALTGIVSVFVTVLALLTYLTFDQMEDDLVNDILTTETERVIQHLAVEPAYVPDRGSRELGGAMHAWL
HVPGEVDDDMPEPLRGLDNGLHLLEPGADTWHVMVADASQGRGKVYVMYDATDNEERVQNFGLFVLGVGAVCIVVAYGLA
RRLAGYVVGPLIDVTDHLANWAPGAPDMAVTRDDEAGRLVEAFNRVQNQVDRSIARQREFAANLSHEIRTPLASIRSDSE
MMQMDRRLPDDTQRRLARIVDDVDSISSSLESARAMAREEPRAAESVKLADCMQAAWQGFAGSAELAGLSFANDIDENVS
RLIDRYALLTVLRNLVRNAIEHAAPAQLRASLNAAGNLVLADNGRGIAPDELPFVFQRYYSRRLRDTGSALNDNELPHGL
GLAIAKQVCDMQDWTLAVDSTREGPQRGTRFTLALG
>AHV94036.1 argininosuccinate lyase [Bordetella holmesii ATCC 51541]
MANNPSQQDQFANKAQAWSARFSEPVSDLVKRYTASVDFDKRLARHDIRGSLAHADMLAAQGIISAQDLADIQRGMQQIL
SEIDAGSFQWLLDLEDVHLNIEKRLVELVGDAGKRLHTGRSRNDQVATDIRLWLRDEIDILIGLLRQLRHALATVALDNA
ATIMPGFTHLQVAQPVTFGHHLLAYAEMFGRDAERLADCRKRVNRLPLGAAALAGTSYPIDRERVAHSLDFDGVCRNSLD
AVSDRDFAIEFCAAAALIMTHVSRLSEELVLWMNPRVGFIDLADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLVALL
TLMKGQPLAYNKDNQEDKEGLFDTVDTVRDTLTIFADMAGGIKVKPDNMRAAALQGFATATDLADYLVKRGLPFRDAHEV
VAHAVRDCERRGCDLADLTLDELKAYHPSIGADIHEVLTLEGSVAARKHIGGTAPERVRIEAQRVIEESA
>AHV94037.1 hypothetical protein D560_0032 [Bordetella holmesii ATCC 51541]
MDIQKLQRAVIDALEDVKAQDIKVFNTTHLTSLFDRVVIASATSNRQTRALASSAADRGRALGLTGITVEGEDTGEWVVV
DLGDIVVHLMQPAIRQYYNLEEIWGGKPVRLKLLPESTRAAPMAGSYDAVSDDEDPA
>AHV94038.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANQPLLTAYLMRDEL
KQLWFYQHPGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEY
FFLKIRSAFPGIPR
>AHV94039.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MLGRDEQALQAARASLAGEGIEAGVVAADITQADAVAVAFEQARAAHGPIQILVNNAGQAVSERFERTSAQLWEQMLQVN
LSGTFHCTQAALPDMLQGGWGRVINVASTAGLIGYGYVTAYCAAKHGVVGLTRALAQEVARKGITVNAVCPGYTETDIVR
QAVDNIMKKTGMDETAARARLAERNPQGRLVSAAEVADTVAWLALPASASVNGQAIAVDGGEAAA
>AHV94040.1 ribosomal protein L17 [Bordetella holmesii ATCC 51541]
MRHGNGLRKLNRTSSHRLAMFRNMAVSLITHEAIKTTLPKAKELRRVIEPLITLGKEPTLANKRLAFARLRDRDAVVKLF
AEIGPRYANRNGGYTRVLKMGFRQGDNAPMAFMELVDRPEVDASEADSAAE
>AHV94041.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MNLTFDHVHKQYGDLLVVDGFSSEFKTGELVALVGPSGCGKSTLLHLAAGLEKATQGRVLADVQPVGGPHPSRTLVFQEH
ALYPWLTLRDNVALALEFQKTPKRQARAAADAWLARVGLNGFEHYYPHQVSGGMRQRAALARAFIAQPQTLLMDEPFGAL
DALTRLSLQDVLRQLIREEKPMVLLVTHDVDEALFLADRIVVFSARPARVLREFNLTHRAKTHDLADLAGEKREILSLLG
IAVGQDHGAQTLAA
>AHV94042.1 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Bordetella holmesii ATCC 51541]
MELDIKGIMERLPHRYPMLLIDRVLEMVPGKSIVAIKNVSINEPFFNGHFPHHPVMPGVLIVEAMAQASALFSFTDENGG
LKSEAGKTAYYLVGIDGARFRRPVVAGDQLRVEVQAERLSRTICKYQGRALVDGQLVAEAKLMCAIRSLEE
>AHV94043.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MADFAQFVFAGLTTGAIYALAALGFSVIYNASGIINFAQGDFLMVGGMVAATLVAMHVPLPAAVAAAVAVGIVVGLLLYF
LAIRPAREANVLSLIIITIGASLFIQGVVQRVLGKNQRTLPAFSGDDAISLAGAYVLPQSLWIWGVSLVLVAGCAVFFRF
TLTGKAMLAVAANRLAAQAVGISTSRILMLSFGLAAGLSAVAGVTAAPITTTVYDLGLMLGMKGFVAATLGGLGSGVGAV
AGGLLVGLLEAFMAGYVSSAYKDAVPFVLIIVILLVMPQGLFGKRSSERV
>AHV94044.1 HIT domain protein [Bordetella holmesii ATCC 51541]
MSDNCLFCRIARHELPAHTVYEDRRIFAFLDLHPVRRGHVLIIPKQHYPYFEDMPAELAGHIVNQGQRLARHMKRLYTVD
RIALAFTGIHVAHAHAHIVPMHHPQDITSTQYIAQQDLTFVMPPQASNEELGATAEELRQALR
>AHV94045.1 hypothetical protein D560_3541 [Bordetella holmesii ATCC 51541]
MVEEAAAAAALQEQSQQLSEAVAVFKVNTGEVIDVATPKLAGGYQSPMVGQR
>AHV94046.1 hypothetical protein D560_1612 [Bordetella holmesii ATCC 51541]
MRVIVIVAFIGILVSLGSALFYLMKDKGSTNRTVNALTVRIGLSVALFLFVLLANHFGWIQSTGLR
>AHV94047.1 methyltransferase domain protein [Bordetella holmesii ATCC 51541]
MSQRYDAVVCCEAIHLLTNPGLALAGFFQALRPGGLLVVTTPNTWYQRSRRQFLLRGFHSGFRPMVGRRRGRDYITYFAW
NFPLLHLLLTHAGYEDIRLHEVEEPKPKRWVEHILALPSRLYCRQQMRRDPRHAAYWRQAGSVQSLHGRWLVVSARRPPR
>AHV94048.1 UDP-N-acetylmuramate dehydrogenase domain protein [Bordetella holmesii ATCC 51541]
MKDGLAIAFDEMFDAQGRVRPHYENYAYWLDGQAPDIMAARQIEADLNFRRVGITFSMAGDAAGTERLIPFDLIPRIIAA
QEWRRLDAGLKQRVRALNRFIHDIYHDHDIVRAGVVPAEQVFLNAQYRPEMQDIDVAEDIYCHVAWR
>AHV94049.1 pyridine nucleotide-disulfide oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MRAQQQWVQRAGGQGVTVGAYEVDPLARCVNGQHYDLILVFYGWEPQADFADGLELARDAHGYIQTDGATARTSLPDVYA
IGEVANRAHPCVVTAMADGVVAAKDIQRRWERA
>AHV94050.1 ABC transporter transmembrane region family protein [Bordetella holmesii ATCC 51541]
MWGLLKKLYVRRRGGLAGAFFLALLTLAAGVGLLGVSGWFLTGAALAGAGAIFNLFVPSSLVRGLSFIRIASRYAERLAG
HAATLRLLSDLRGSVFRSLLRLTPRQLSRYRAGDLVARLTGDVDALDAVFLFVIMPVATALVGGAIFCLVLGYHLPGPAW
RWRGRCWWPVCWCLGGSAGWRVARVNRLKPVRPPCVTP
>AHV94051.1 pyridoxine 5'-phosphate synthase [Bordetella holmesii ATCC 51541]
MIELGVNIDHVATLRQQRHTTYPDPVEAAVRAEDAGADVVTLHLREDRRHIQDADVYAIRPRLRTRMNLECALTPEMLEI
ACAVKPDDVCLVPEKRAELTTEGGLDVVGQFDAVADAVALLTEAGIRVSLFIDPDNGQIEAAARAKATVIELHTGAYAEA
EGEVAGRELLRIQAAVQEGLRHGLRVNAGHGLHYGNVQPVAAIDGVSELNIGHAIVAQAVFDGWEKAIRDMKALMIQARA
DRFPFSLARPQVDGQTPGKLDGDPTSGGFYMNVEQAGLAYDFAIAALFRAAFSG
>AHV94052.1 putative exported protein [Bordetella holmesii ATCC 51541]
MTNALIRFLRAIPVIVLGLIGMLMALVFMASTAIALGILYMVAKVRGKPFGVRAYWSQRQAGRPFQAQPPFAAAPARGGD
VIDVEAREIR
>AHV94053.1 ftsJ-like methyltransferase family protein [Bordetella holmesii ATCC 51541]
MAKKKFSKDWIHQHINDPYVKLAQQKGYRARAAFKLIEILETEKLLKKGDVVVDLGSAPGSWSQVVRERLAGAGGVVAGR
IIALDLLPMEPIAGVEFFQGDFRDDDVLAELEQRVGNHAVDLVISDMAPNLSGVGSADSARIQHVCDLALEFSCAHLKPN
GALIVKAFHGSGFSQIVQSFKQRFKRVVERKPKASRDKSSETFLVARDLKDPVVRDLKTNTAE
>AHV94054.1 CDP-diacylglycerol-serine O-phosphatidyltransferase [Bordetella holmesii ATCC 51541]
MPNFSMRDPENRHRSIYLLPNAFTTAALFAGFYAVVQAMNDRFETAAIAIFVAMVLDGMDGRVARLTNTQSAFGEQYDSL
SDMTSFGVAPALVIYEWILQDLGRWGWLAAFVYVAGAALRLARFNTNIAVVDKRFFQGLPSPAAAALVAGFVWLAIDNKL
PIHDSIMAWVAFVLTMYAGVAMVSNASFFSGKNFALGRSVPFWGILLVVAVFVFVSSDPPVVLFGLFVLYGLSGWVVMAW
RWNRARRLQQERRSGHHSP
>AHV94055.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MTLAKKPRLARALTGLIAGTVSAFALSSTPALAAYPDKPVRIVVGFSAGGTTDVIARIMAKELTEALGQSFVVENKPGGG
SNIATDYVARATPDGYTLLFVAVTSAINQTLYSNVNFDLVKDFAPVALGAKVPNVLVINPQVPVKSVQELVAYAKANPGK
LAFASSGSGTSIHMAGELFKQRAGIDVLHVPYKGSAPAVTDLIGGQVQFMFDNMPSSWPHAQSGKLRALAVTTAERSKSA
PDLPTMQEAGFDKFDVSSWFGLVAPAGTPKDVIDTLNAAMMKGLDKPSVQKAYESLGAIGQKTTPAEFGAFIKSEVEGWA
PVVKTSGARVD
>AHV94056.1 citrate (Si)-synthase [Bordetella holmesii ATCC 51541]
MNLSDKKATLSLSDGSAPIELPVYKGTLGPDVIDIRKLYGQTGMFTYDPGFMSTAATSSGITYIDGDKGELLYRGYPIEQ
LAVNCDFLDICYLILNGELPDGAQKTDFDSQVTHHTLVNEQLHFFLRGFRRDAHPMAVLTGLVGALSAFYHDSTDITNAQ
HRHVSAIRLIAKMPTLVAMAYKYSQGQPLIYPQNDLSYTGNFLRMMFATPCEEYKVNDVVERALDRIFILHADHEQNAST
STVRLCGSSGTNPFAAIAAGVACLWGPAHGGANEACLQMLEDLQANGGVAKVGEFMEKVKDKNSGVRLMGFGHRVYKNYD
PRAKLMQETCKEVLGALGLENDPLFKLAMELERIALEDDYFVQRKLYPNVDFYSGIVQRAIGIPTSLFTAIFALARTVGW
IAQWNEMLSDPDYKIGRPRQLYTGSVVRDVPKR
>AHV94057.1 pirin C-terminal cupin domain protein [Bordetella holmesii ATCC 51541]
MTAAGGILHEEFHSPDFSAKGGELEMVQLWVNLPAAHKMAEPGYQAIGAQQIPQVDLPLATLRVIAGEFGGTRGPARTHT
PMNVWDLRLSPGGSLSLGVPDGHQAIVVVLRGTVLLNEDEVLRDAQLAVLAAYGEIVDLEANNDALVLILSGEPIDEPIV
GHGPFVMNSREEIVQAFQDFESGRFIRSVAR
>AHV94058.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MMSASTPSPSQSYLQQFSLSGQVALITGSARGLGWEIACAMAGSGAHVLINGRTAPAAEAAARQLRERGMAASALPFDVA
DAEAMQQAFSQIDACHGRLDILVNNVGARNRKTLRELDLVQIRELIDTDLVAGIMLAKLAAERMVRQGNGRLIAITSVAG
ELARTGDAVYPAAKQGLTGMMRALAAEFGAAGITSNAVAPGTFATETNAAMVNDPIAGPAWPRAIPWGAGANRMKSPVRP
SFWHRPRPLTSTARCWPSTGGFRSSSEAVGRQLLAAAML
>AHV94059.1 ATP-dependent helicase HrpA [Bordetella holmesii ATCC 51541]
MPETPRPAASPRPARPERPIPVITYPEDLPVSARRQEIAQAIAAHQVVIVSGETGSGKTTQLPKICLELGRGRRAMIGHT
QPRRLAATSVAKRIAEELNTPMGEVVGYQVRFNDRTGPNAAIKLMTDGILLAESQRDPLLRRYDTIIIDEAHERSLNIDF
LLGYLRQLLPRRPDLKVVITSATIDADRFAQHFADAQGQPAPVIEVSGRLYPVEVRYRPVQAPQTDEQASAPAKGTRERL
AGDEERDLIDAIVDAVDECARHGPGDVLVFLPGEREIRESAEALRKRHPVGTEILPLYARLSQAEQEKIFHPRGNSRRVV
LATNVAETSLTVPGIRFVVDSGLARIKRYSWRNKVEQLRIEPISRASANQRAGRCGRIGPGLCIRLYDEADYNARAAFTD
PEVLRSSLASVILRMKALKLDDIEQFPFVEAPPGRAVADGYHLLQELGAIEMSDDEDGQGKRVFTLTRTGQDLARLPVDP
RIGRMILAAREQQCLTEMLIIAAALSVQDARDRPMQEREASEAAHAKFADEKSEFLSFLKLWRWYGEQVQHKVSQRKLVA
LLRQNFLSPIRLREWHDVHSQLASLVGEQGWRLNQSDATYEQLHLALLTGLLGNIGFKSEEGANYLGARDIRFHIHPGSR
LAKKAGRWIVAAELVDTTRLYARCVARIEPVWIERAAAHLLRRNFSDPRWEKKAGQVVANERATLYGLVIYSGRRVQYGR
IHPEHARELFIRQALVPGEIDTRLAFVAHNRKLIAGIEKLEHQTRRPDILVDDELIYAFYDRQIPAGMSQTATLEKWVHG
LDKKAAARLMLTREELMRHEAAGVTTEVFPKKVEWQGVSMALDYHFEPGSPRDGVTLSVPLFALNQIDAQRCEWLVPGML
KEKAHLLLKSLPQKQWRHCVPLPDYAAGFYDRWFERAADPGMGLIDALSEDMWKQVQVRPLASDFKLETLPAHLFMNFKV
VDEHGRMLAAGRNLAQLKAELGKQAQATFQQLAARDNDVAQALAHENLTGWTFGPLPDIMEIRRGGQSVVGYPALVDRGT
HCDLDVFDDPEEARRHHRAGLLRLFRIGLREQVKFLEKNLTDLTKMSMFYMTLGTQDELRDQIIDCALAQACLGEPWPVN
EQQFDARRQDGKGRLGLLAQEVARLSMAILTEYAALQRKLAQAKPHAAAYADLMQQLGALMPKWFVRDIPYAHLAHYPRY
LKAAVARIDKLRADPERDARLLAEMAPLLTQYQRARSALKGAPDPRLDEFRWLLEELRVALFAQELRTPMPVSVKRLLKT
WESMRR
>AHV94060.1 fecR family protein [Bordetella holmesii ATCC 51541]
MRPTDRKADPVREQAARWFARSRDGLDAACRAELDAWLREDPRHAYEFQALHAIWQAATQVPADRLRALAEPPARRPVSA
RRAVLTAGACALALGLGAVVWGVLPGADVVDYRTAAGERREVRLPDGSLALLNSRSHLRVTVDASSRRVDLLAGEALFSV
VKDASRSFSVDAGAGTATVTGTRFVVRRDGEALRVAVESGSVNVAGTRDAHGIALGPGQAIRVDPQGRVGAIEPAALDTT
LAWRSGQIIFTDTDLGAALREVSRYREQPIVPAADARLASMRLSSVFRTDDTDAFLCALPRILPVELRTLPGGGVEVVAR
>AHV94061.1 cheD chemotactic sensory transduction family protein [Bordetella holmesii ATCC 51541]
MTARLDARASRHYYDSTFGSHAVKVLPNEYFVTAGEDIMLSTVLGSCVAACLRDPVTGVGGMNHFMLPEGDAQSPASATM
RYGAFAMEVLINELLKAGAARERLQAKVFGGGAVLSAMQQMNIGERNGRFVLQYLKTEAIPVLAQDLGDIHARRIHYFPR
EGRVLVRKMPAHHARAEEIIAHREHLAAQSARDKARSAPRVERFDRPKMKVELFNMPRRPVGQA
>AHV94062.1 hypothetical protein D560_2073 [Bordetella holmesii ATCC 51541]
MPMPSANRQVAGMPRAGRNMTAPGDPGVLAAEDDVLPSAVRRNGDDA
>AHV94063.1 peptidase M3 family protein [Bordetella holmesii ATCC 51541]
MTQNPLLAPVADLLDYASVKPEHIAPAIDELLALARQAVDAAADPARPATWEAIVEPLDTRSELLWRAWSVAGHLNAVVN
TPELREAYNAALPKVTEFSTWVGLHEGLYRQYQRLSQADDFAHWSPVRRRVIELALRDFRLSGVELQGEARARYAEISDR
QAQASQKFSENVLDAIDAWSLHLDDATRLHGVPADVVAAAADAAREQGQDGHLLTLKMPYYLPVMQYAHDRSLRETMYRA
YGTVASEQGQPQFDNSALIEELLALRAEEAALLKFASFAELRLQTRMAASASEVTAFLRDLAGRAKPHAQRDLAELRAFG
KSELGLDDLQPWDVPFVSERLRETRYAYSKDEIKQYFTEPRVLAGLFDVIETLFDVRLQAADVSTWHADARGVRVTSAQG
KTLGYLYLDLYARAGKQSGAWVDSERNRRLVGGTVQTPVAYLTCNFSRPNGGKAALLTHDDVITLFHETGHALHALLSEV
DEPGASAFASVEWDAIELPSQFMENFCWEWAVVQKLSAHVDSGQPLPRELFDKLLAARNFQSGMQAVRQIEFALFDMLMH
DRAGGMPIAEVLSLLQTVRAEVAVLFPPAWHRFPHAFSHLFAGGYGAGYYSYKWAEVLSADAYEAFEEAAQAGSILNPAT
GQRFRREILAVGGARPAAESFAAFRGRAPRIDALLRHSGMLESA
>AHV94064.1 fecR family protein [Bordetella holmesii ATCC 51541]
MSESRIDSRPFWRKHLLAVVFLVLALLLALAFTANWVLRESSPQFSVQVDTPAGQSRTITLEDGTEIVAAGGTELGVAVY
PRRRDVILDHGQVYFRVVYKFRTNLNVRMGVNEVNVLASAMATPDTIFDVKLDAGHLIVRVKQGEVKVRTQSAGPREFVE
LSAGQAVDVDLKKVRHEVRPIDPASIGAGN
>AHV94065.1 homoserine O-acetyltransferase [Bordetella holmesii ATCC 51541]
MRFDEPLPLASGQSLHAYDLTVETYGKLNADRSNAVLVCHALNASHHVAGMAADNPKDVGWWDNMVGPGKPVDTNVFFVI
GVNNLGSCFGSTGPASLNPATGQPWGAAFPVLTVEDWVRAQARVADHFGIERFAAVMGGSLGGMQALSWSLTLPHRVAHC
VVIASTPRLSAQNIGFNEVARRAIITDPDFHGGDYYAHNTVPRRGLAVARMLGHITYLSDDDMAEKFGRTQREPAENGAY
HYGYDVEFEVESYLRYQGEKFSRYFDANTYLLITRALDYFDPARDTGGDLARALAPATADFLLVSFTTDWRFPPERSREL
VRGLLKNGSPVTYAEIDAPHGHDAFLLEDARYHAVVRGYYERIARSLGLQASHPLRNARHEPCPENRRTCGVAPRP
>AHV94066.1 translation initiation factor IF-1 [Bordetella holmesii ATCC 51541]
MAKEELIELQGIVDEVLPDSRYRVTLDNGVEVGAYASGRMRKHRIRILAGDRVTLEISPYDLTKGRINFRHKDERPSSSP
SRPMVRR
>AHV94067.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MPSLSASPALRRFRVLDLSRVRAGPTCVRMLADFGADVIRIEPPPGVDPNEAMFAADRWSGDFQNLNRNKRSLTLNLKKP
EGLEVFRRLVAGADVVVENWRPDVKARLGVDYASLRALNPRIILASISGFGQTGPYAGRPGFDQIVQGMGGLMSVTGLPG
QGPVRAGLAVADSSTGLYTAIGILTALLEREVSGEGQWVHASLLHAQIAMMDFQGARYLNDGDVPVQEGNDHPTSSPMGL
FQAQDGAFNLGASGEGNWKRFCQALGRQDWLADPEFQTEKLRVRHRQRLNTEIQAVFERESVAYWVDVLNAAGVPAGPVY
NVPQMFEDAQVRHLDVARPCQAWQGGERTFITQPVTLERTPADIERTAPGWGEHTDEVLREAGYEEQDIRRLHDTGVV
>AHV94068.1 membrane fusogenic activity family protein [Bordetella holmesii ATCC 51541]
MNRTQWMEDLQKNVSDLIARSPAADVERNVRAMLTQGFARLDLITREEFDVQTELLARARTRIDQLSAQLQQLEARVNTL
AGEAPRE
>AHV94069.1 antibiotic biosynthesis monooxygenase family protein [Bordetella holmesii ATCC 51541]
MIQEIASIRIKAGQEAAFEAGVKAAVPLFLRAKGCHGVELHRWEESAQDYTLVVQWETVDNHMVDFRNSADFQEWRRLVG
EHFAAPPQVHHEARVV
>AHV94070.1 putative pilin protein [Bordetella holmesii ATCC 51541]
MIEISVVAAILLIVAVIGVPAIQGYVVESRVPKLAEALQRFVVRARIAGTGAPAPYAGMETPILAEALRESGVVTVTGQG
AGAQVLHGLNDGTISLAAAARPGQAAGSAFTLTLDRVHAAACPGLAAAMQLLASRVSVQGRGAAVLVKNADASPAQAYDG
LRAAAQCTASNTFVFTFP
>AHV94071.1 sensor protein KdpD [Bordetella holmesii ATCC 51541]
MADPGNDRLDPDRLLQTLEQAQSDARRGRLRIYFGACAGVGKTYAMLAAARAQAAQGVDVVAGLVETHGRADTAALLDTL
PALPLQTLDFQGRRLREFDLQATVARRPRLLLLDELAHTNAPGARHAKRWQDVEELLAAGIDVWTTLNVQHLESLNEAVG
GITGVRVRETVPDSVFDAADEIILVDLSADELLRRLREGRVYVPEQARHASRHFFRKGNLIALRELALRRTAEHVDDDVR
AYRHERAIEPVWRTREAVVACIDADPHAEHVLRSAHRLAQQLDCEWHAITIEAPRVAPLPRAGRARLDQALALAETLGAH
VETVAGTDMVDAATRYMRRHNITKAVVGRDAWRRRGLSGLLDAALTPGRLLRRRSFADALASACPEADIVRVGAPSAATA
APRRDPRSWRNASAPAGHAAAGAYLWALAYCAAATLASRLAFPVLHQTNIVMIFLLAVVAAALRHGRGPAALASVVSVAL
FDFFFVQPLASFAVSDVQYLLTFAVLLTVGLLVGQLTAGLRQQARAAARREADARGLYEFARELSAALQPEQIAGAASAF
LNAAFGARGALYILGLDDRLRLAPGAGDAALEPTLAQWAFDHGQACGAGTDTLSNSPVLYLSLRAPMRVRGVLALHHAGP
PLYSAAPARRQLDAYATLIAIAIERLHYVEVAQQALLSIESERLRNALLTAVSHDLRTPLTSLLGMAETLQRSPAAMTPA
ALETVAAMQDQARRMHALVVNLLDMARLQSHDAPLRRQWQSVEELVGSALAAMNAALQDRPVTVAPLSALPLVKCDGILI
ERVLCNLLENAAKYTPPGSAIHIDALADRQRIFEKFARGQRESAPPAQASGWRYAAPSWTPTRAASGSSRPGACAAPASS
SRCR
>AHV94072.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MQAETGFFGSAGAALGQGIKWVAEALRWLFGGFFGALGEFFAGMAAALGMSPNIMNFALLLIGLLMLWAGIKAFARRSIL
SGVFWLVLCALLLGALTG
>AHV94073.1 acetyltransferase domain protein [Bordetella holmesii ATCC 51541]
MLELARLDKTTDGSGNWAGTGQRTLAVGLARTPEEVEQIQRLRYQVFTQDMGAVFPDAHDGIEQDRFDQWCEHLMVTELD
TGRVVGTYRILTPEKAREAGGYYSESEFDLSGLGPLRHEVVELGRSCTDAEYRGGAVIMLLWSGLAEYLRRGGYRYALGC
ASVSLRDDGVTAAEVWRTVCKSLPGEGEPRVAPLHRYPVERLDSPLPARVPPLIKGYLKLGARVCGEPAWDPDFNAADFP
VFMDMEMMDERYKRHFGLVEPPAELRPTGTR
>AHV94074.1 hypothetical protein D560_3743 [Bordetella holmesii ATCC 51541]
MSRRLYRYFFLGLITVLPIALTLYLLFIFLAWTEAIALTFLRPFIGNFYIPGLGLFLGILAILAIGFLVSKERVQRVVLF
LEIPFTNVPVVKSIYSSLKSFADYFSSSAKATSQQVVVLRMPGNPLEVVGLITRRGTDDLPEGFLPGERVAVYLPMGYMI
GGYTVFVPTEWVTPINMSVEEAMRSSLIAWMARSDSTSPPPSDPPATPAPPTDRAA
>AHV94075.1 uvrD/REP helicase N-terminal domain protein [Bordetella holmesii ATCC 51541]
MASDSSNSSCPTDPLAELNAQQREAATFGVAAGAAPGQALLVIAGAGSGKTNTLAHRVAHLLLNGADPQRLLLLTFSRRA
AQEMDRRVGSVLRKVLRMGSAQQPASLPWAGTFHSIGARLLRDCAHRIGLSESFTVHDRGDAEDLIGLLRHELGLTATQT
RFPLKGTCLSIYSRVVNSQEPLADVLASTFPWCAQWEAELKRLFQAYMAAKQDQQILDYDDLLLYWAEMMADPGIAADLS
GRFDHVLVDEYQDTNRLQAGILHALKPDGRGLTVVGDDAQSIYAFRAATVRNILDFPQQFQAHVVTLERNYRSTQPILDA
SNAMIAQAKERYAKALWTDRASQQKPQLVNVSDEAGQARWIADQVLAQREEGARLTSQAALFRTASHSAALELELTRRNI
PFVKFGGYAFWRPRTSRI
>AHV94076.1 spermidine N(1)-acetyltransferase [Bordetella holmesii ATCC 51541]
MLNLHKVYLVVDKQNEAAVHIYQACGFSVEGELREEFFPMDVIAMLTG
>AHV94077.1 putative oxygenase [Bordetella holmesii ATCC 51541]
MAADAPITDDLSRQWWLQVLDGGFTLAWFGGEQAPDGQTLANLSALADHPLAPRIVLIRPAGARWQAEPGACCVTDTAGM
LAARYDAQPGTCYLIRPDQHIAARRRDTDTVALSAALRRAAGHP
>AHV94078.1 hypothetical protein D560_0969 [Bordetella holmesii ATCC 51541]
MAALALLGWTTMASAHFVWLEPAGENKVRAYFGEWADDQREKTEGFLGKVVVEPSVNGKKVKPSATGADYFEFEARGDTR
LGQPVLFKETLVDYNARLGRTDTKALLPLEIAPTAAGGNTFVLTFEGKPLAKTEVTVFGPPKWMKQFHTDEAGKFTIETP
WAGQYVLEAGHTVEKNGQHDGKPFTKTRFVTTLTFERAK
>AHV94079.1 entericidin EcnA/B family protein [Bordetella holmesii ATCC 51541]
MKHKALMIIVLAMAAVSAGCNTVAGAGKDIERGGEAIQGAANK
>AHV94080.1 arginine--tRNA ligase [Bordetella holmesii ATCC 51541]
MLPEQHHQLISLLARAVASLLPEAQPDIQLERPKVAAHGDVATNVAMQLAKPAKRNPRELAQGIVEALLADPEARAIVDS
AEIAGPGFINLRLTSAARQAVIAAVADQGADFGRAARLGEKVLVEFVSANPTGPLHVGHARQAALGDALCRLFDATGWDV
TREFYYNDAGNQIENLAISVQARARGIATDAPEWPADGYKGDYIVDIARDYAARASVHAADGHAVQASGDIDNLDDIRAF
AVAYLRHEQDLDLQAFGLTFDNFYLESSLYTSGRVERAVQTLVSNGHTYEQDGALWLRTTELGTGDDKDRVMRKSEGGYT
YFVPDVAYHQAKWERGFRQAINIQGSDHHGTVARVRAGLQGLDEGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTM
RDLIEWVGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICSMIASSGLDEAAIIAADPAPLTAPTEFA
LMQRLAEFPGVVKLAAQELAPHHIAFWLRDCAADFHGWYNAERVLVDDPAVKLARLRLAATTRQVLANGLALLGVTTPQR
M
>AHV94081.1 hypothetical protein D560_2779 [Bordetella holmesii ATCC 51541]
MDTGGYGVLLTVTAEGGTEIDAAFSYLGPCASLDEARDRAESFAQDWLSENIYR
>AHV94082.1 leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Bordetella holmesii ATCC 51541]
MNKPFHLTPILAAVGVTMGLAWSGAQAQNIKIGVVGPTTGPVTQYGDMVREGVDTAIEQINAAGGVNGKKLEAVVIDDAC
EPKQGPVAANRVVNQQIGFVVGHVCSGATIAATDIYNNEGVVMVTPSATAPAVTDGKNYEFIFRTIGRDDQQGPAAAKFI
ESKIKPANVAVLHDKQSYGQGIATAVKKDLEKAGIKVSVFEGINAGDSDYSAVITKLKSNGVDFVYFGGYHPEMGLLLRQ
AAEQGVKARFMGPEGVGNPDINAIAGDAAEGMLLTLPADFAQNPANAAVVKAFQEKKRNPNGAFQLTSYAATQAIADGIK
GAGSTDPTKVAKYMHANTFETPIGKTAWNKQGDLNNFEFEVFTWHKDGSKTAFK
>AHV94083.1 hypothetical protein D560_2196 [Bordetella holmesii ATCC 51541]
MVADDPTSDCPPADAMGRIRALMQALTERDPHTAAHSQRTARIAMALGEAACLGEADSYVLGAAALLHDIGKLGVPARIL
ESKGKLEGMDWARMQEHSILGERVVRAADLPLGEQLARAIRHHHENIDGSGYPDGLSGEQIELSARMISLADAYDAISSA
RSYHGGHSHEQTMQILMGEVGRKCDPGLFALFVGEVAPRVTGARPWPEADDAAWRAIRCYCEGLD
>AHV94084.1 colicin V production family protein [Bordetella holmesii ATCC 51541]
MTILAVSGILGLVRGLLKEMLSLAAYLLAFAAAIWWGPTVYTWLQAYIETSVLRMGVSYAAVFIIVLLAVGLVNMTLSAL
IRSTGLSPADHGLGAVFGLARGLLMIVVLVALAGYTPLPEETWWKDAMFSHSATEAVRQLKAALPPSLATWLPY
>AHV94085.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MHTYSATRRSMCLAAALAALALGPLAAQAKAPYPDHPIRLVVPFPPGGTTDTLGRLLAPRLAERLGQSVIVENRAGAATQ
IGAMEVARSPADGYTLLLTGPSTFTANPAVNTQSPYDPLKSFDYLGLTGTMPVILLAHPKAPFKDVKSMVEQAKREPGRM
FYGSFGPRSIMHFAGETLNASADVKLTSVAYKGSSPAMTDLLGGQIPMTFDTVVVSAPYVKSDKVSPLAVTTAKRSTLLP
DVPTMTEVGYPMDISSWLGIAAPGRSSFLAGMSFGSFKHTPGPGRATHARAVPTVGTPPSRFGRAWVLPQGVHPVCGKIP
GDCAWMITRWRLAL
>AHV94086.1 cytochrome o ubiquinol oxidase, subunit III [Bordetella holmesii ATCC 51541]
MSDTLATADPGRSPQAPGPVFHITDEHHPQNDTLLEFWVYLMSDCLIFACLFATYGVLGRNYAGGPTGAELFDLPLVAAN
TSLLLLSSITYGFAMLEMQRRRLGGVQAWLAVTGLLGLGFLSLEIYEFAHMIAEGAGPGRSAFLSSFFTLVGTHGLHVTF
GIVWLITLMVQLRLHGLIPANRRRLMCLSMFWHFLDLICVGVFTFVYLMGVLP
>AHV94087.1 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD [Bordetella holmesii ATCC 51541]
MQLDRHGWLRPAPAVTRLPSPNVDARPPGAQVSLLVVHNITLPPGEFGGPYVADLFLNRLDLDAHPWFARLAGLRVSAHF
FIRRDGSIVQFASIYDRAWHAGVSRFEGRERCNDFSVGVELEGTDRLPYTDTQYATLSELAQRLRARLPLRAARGHEHIA
AGRKTDPGPSFDWPRFARGAGFLRRALPPR
>AHV94088.1 hypothetical protein D560_2185 [Bordetella holmesii ATCC 51541]
MNHFYFHLVTAYDVLRHSGVNIGKRDYLGPYPIAEKPSH
>AHV94089.1 periplasmic binding family protein [Bordetella holmesii ATCC 51541]
MKSLRIAVVALAALLLPAAAQAREVTDLAGRQVHVPDHPTRILLGEGRFVFAMALLDRANPVQRVVGWQGELKAQDPQAW
KQLLDRYPQAAAIPFIGKNSEASVSPERIVSLHPDLAIFGLSGHGPGPANPMIAALQHAGIPILFIDFRAKPLQNTIPSL
RVLGQALGREHEAERYIDFAQQRRAAVQAVVDGVPAEQRPRVFVELLAGVWPACCHTTGAGGLGDMESAAGGRNIASERV
PGAIGDVSLEYLIQQQPDVYIATGSRNEPGRPSIVAGPGVAPGVVNGSLQAVLSRDGIKDLNAVREQRAHGLWHAFYNSP
YNIIAIEALAKWFYPASDLNPQASMDRLYRDFVSLDGQGSYWTR
>AHV94090.1 HAD hydrolase, IA, variant 1 family protein [Bordetella holmesii ATCC 51541]
MKYALVAFDFDGTLADTLPWMESILHDVAEKFSFRKPDAQERLRLRQHSAYEIMKQLGIPLWKAPAILTFVRQAMEDAMP
RVALFPGVDAMLRAVHDSGARMAVVSSNSTANVQRVLGPQLTALIADYACGTDLFGKSTKMEHLLRDTQIPPGQAILIGD
EIRDIEAARKIGVASGVVAWGYNPEATLREHSPDLVFNDVRDLARSLLPA
>AHV94091.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MALDQETLNLLLDAVRRFVTERLMPAEDELAHTGSIPEDIVREMQELGLFGLSISPEYGGLGLTMEEEVRVVFELGQTSP
AFRSLAGTNIGIGSQSIVLAGSDAQRRHYLPLLASGELIGSFALTEPDAGSDAMALRTTATRDGDHYILNGTKRFITNAP
IAGLFSVMARTATERRADSISCFLVEAGTPGLTLGKPDKKMGQAGALTCDVVFDNCRVPASALLGEKEGTGFRTAMRVLD
KGRLHIAALCVGIAERLVRDAARYALERQQFGKPIAEFQLVQAMLADSQAEMYAARCMVLDAAAKRDRGENTTMEAACAK
MFSTEMVGRVADRAVQIHGGAGYMAEYAVERFYRDVRLFRIYEGTTQIQQLVIAREALKAYA
>AHV94092.1 hypothetical protein D560_2005 [Bordetella holmesii ATCC 51541]
MLAPRWPRRPSIKMALGALGSPWMVGWLYCYDDSILE
>AHV94093.1 hypothetical protein D560_2828 [Bordetella holmesii ATCC 51541]
MPHTGFSNRAARRLGRRMASLAAALAVGAVVAWFQVDHSRPATPGPAGAGAGLPVASYEIHGTVVSVADGDTVTLRSAGG
QRRIRLDSIDAPEAGHGRDEPGQPYAEASRQHLAALVTGKNLTAQCYEKDQYGRDLCALMLPDGRSVNREQVAAGNAWAY
TARRGDYLRDKAMPELQRRAREARLGLWAEGGAMEPWKWRYDCWKEKRC
>AHV94094.1 acetylglutamate kinase [Bordetella holmesii ATCC 51541]
MSPAVKAAVLSEALPYIRRFHGKTIVVKYGGNAMTEERLQRSFAHDVVLLKLVGLNPVVVHGGGPQIDDALRRIGKQGTF
VQGMRVTDAETMEVVEWVLGGQVQQDIVMMINEVGGKAVGLTGKDGMLIQARKKLMSNKENPTQPLDIGFVGDITRVEPA
VVKALQDDQFIPVISPIGYGEDGTAYNINADVVAGKMAEVLGAEKLLMMTNTPGVLDKSGNLLRSLSAQTIDELFEDGTI
SGGMLPKISSALDAAKNGVNSVHIVDGRVPHCLLLEILTDRGVGTMISSH
>AHV94095.1 periplasmic solute binding family protein [Bordetella holmesii ATCC 51541]
MSLDRSRRLLLCLALLAGLSPPLTALAADKFKVVTTFTIIADMARNVAGDAADVTAITRPGAEIHEYQPTPGDLARAQGA
QLVLWNGLNLERWFERFFSRVRNVPSAVVSDGITPISIDAGPYQGKPNPHAWMSPQNALIYVDNIRDALARHDPAHAEIY
RANAQAYKARIQATLQPIAQRLHAIAPDRRWLVSSEGAFSYLARDFGLQELYLWPINADQQGTPQQVRHVIDVVREHKIP
AVFSESTISPAPAKQVARETAARYGGVLYVDSLSEPDGPVPTYLDLLRVTTETIARGLQP
>AHV94096.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MDDILQVRNLVKRFESGGGWLGGQKQVVRAVNDVSFSVHRGQSLGLVGESGCGKSTVARTLLRLIEPDEGSIVFDGQDIR
RAGGQAMRALRRRVQIVFQDPYASLNPRRTVRQALTEPLHVHRMGTPDEIARKVEQAIDEVGLPASTLDRYPHEFSGGQR
QRIGIARALVLDPELIVADEPVSALDVSVQAQILQLLDRLKRDRGLSFVFVSHDLGVVRHFCDSVCVMYLGRIIEQGPTA
QVLDTPRHPYSRVLRDSSPVPDPQARIRLMKIEGEIPSPTHLPPGCAFHPRCARAQADCKSAVPPLAGQGDRRLAACFHP
LV
>AHV94097.1 fructose-bisphosphate aldolase, class II, Calvin cycle subtype [Bordetella holmesii ATCC 51541]
MALVSMRQLLDHAAEHGYGIPAFNVNNLEQVQAIMEAAAETDSPVIMQASAGARKYAGETFLKHLIQAAVESYPHIPVVM
HQDHGQSPAICQGAINLGFSSVMMDGSLKEDGKTIADYDYNVDVTRKVVDMAHKLGVTVEGELGCLGSLETMEGDKEDGH
GADGKLTMDQLLTDPEQAADFVRKTQLDALAIAIGTSHGAYKFTRKPTGDILSIQRIKEIHARLPNTHLVMHGSSSVPQE
LLAEIREFGGDMKETYGVPVEEIQEAIKYGVRKINIDTDIRLAMTGAIRRFFAENPAKFDPREYLKPARAAAKAICVARY
TEFGAAGNGSKIKPTSLADVAQLYASGKLSQVVQ
>AHV94098.1 putative conserved exported protein [Bordetella holmesii ATCC 51541]
MNTDIDCIVIGAGVVGLAIARALALSGREVLVAEATEAIGTGTSSRNSEVIHAGIYYPAGSLKARLCVRGKHLLYEYCAT
RGIGHHRLGKLIVATSETEAASLAGIAQRAAANGVDDLQPLSAQQAQALEPALRCTAALLSPSTGIVDSHALMLSYQGEA
ENAGAQFVFHTRMLGARVRAQGGFDVDFGGPEPMTLSCNVLINSAGLHAPTLSRRIEGLPAASIPAEYLCKGSYFTLAGR
TPFGRLIYPVPQHAGLGVHLTLDMGGQAKFGPDTEWIPVEDYTLHPERADVFYEAVRRYWPQLPDHALAPGYTGIRPKIS
GPHEPAADFMISAPAQHGIAGFVGLYGIESPGLTSSLALAEETLALLVG
>AHV94099.1 tetrapyrrole (Corrin/Porphyrin) Methylases family protein [Bordetella holmesii ATCC 51541]
MAAQHWPEGALYVVATPIGNLGDLGLRAWQALARADVIAAEDTRASRTLLDAWGISTPLMAAHRHNEAQAADAICQRLAQ
GQRVALVSDAGAPAVSDPGARVVRAVREAGHTVVPIPGPSAVITALMGSGVTTDENPAFAFAGFAPPKAAARQRWLAEWG
ALPAPVLLFESPHRLAATLADLLQVCGPQRQLTVARELTKRFEEIVTFALADGAAWLAGDSHREQGEFVLILHAAARRED
DVASDPATDRLLDALLESVSVRDAARIAAKATGLPRDTLYQRALARKEQA
>AHV94100.1 hypothetical protein D560_2646 [Bordetella holmesii ATCC 51541]
MLISVLSPLVRRLARMLAGSYGLRAALIVSVALAVGGCTQNEPQERAALIAWLQQDSNAAPDAGTLRRFGDYRQHHAVIG
AYLQVQAGASHSIEQALSELPAHSVQEVASRRERLLVLRASLHREQQHLEQAYRQAVSQRKDLMQAPDLKVAYDQAFERL
VTHPQAVMVSLMDLLEEPLSVSLKVADFVALHQDQITVAGPVTQVMDPTVRDALNALLDTLNAQSRALQRAAALCRQLEL
CSTGPGGASPSMAPAPRFQDDL
>AHV94101.1 ribonuclease R [Bordetella holmesii ATCC 51541]
MPAAPPDFDPDVPSREEILNALRTAGAPLAPAELAQRMGVEREATLVGFERRLAAMERDGQLLPNRKGVLLLATKLDFVA
GRVQGHRDGFGFLVRDDGGQDIFLSPREMLKVLHGDRVLVKPAGEYRGKPEGTIVEVIERRTNKLVGRFLHEHGLSIVAP
EDQRIKHDILIPPGDTNGAQHGQVVSVEIIEQPTRHTQPLGKVFEVLGEIDDPGMEIEIAVRKFDVPVEFSEAARKQAAR
LPDVVRKSDLKHRVDLRDVPLITIDGEDARDFDDAVYCQPVDLGTGQRKRPGWRLLVAIADVSHYVKPGDAIDDDAIERG
TSVYFPRRVIPMLPESLSNGLCSLNPNVDRLVLVCDMVIPATGAKAGTVTAYQFYNAVMHSQARTTYTSIWEALQQPGGP
AAAALGKLLPDVQHLYELYQLLSQQRKKRGAIDFDTIETRIVCNELGRIEQIVPMVRNDAHKLIEECMLAANTCSADFMH
RSKHPGLYRIHEGPTPERLQALREFLRTQALSLGGGDTPTAKDYGEFLDTVRGRPDFPLLQTMSLRSMQQAVYSPDNMGH
FGLAYPAYSHFTSPIRRYPDLLTHRVIKALLQGQRYIPELQSQPLVIGRSQRDHEHAIWEKLGLLLSASERRADEASRDV
EAWLKCWFVKERVGEDFSGTVTGVASFGIFVTLDTLHVEGLVHVSELGGEYFQFNDSLHELRGERTGMRYRLTDKVQVQV
ARVDLEARRIEFRLVKGTSYESLRKQSTRNPDEPRRVKKAAAPKPAALKGQTAKQRRAEAKKTNKVPPTPPQRPAEAAKK
TPRGRR
>AHV94102.1 type VII secretion system (T7SS), usher family protein [Bordetella holmesii ATCC 51541]
MSPTLLSAGLLALFSSAAPAAQQQAELQFDPRMLWGSASHADLRRFARRNVLPPGLHQVEVVINGERGVPMRVRFKAAAS
ASLHDSDALACLDHDQLYRLGVNLDALDPALRAQLAAGACVGVRDIYPDSVESFDYATAQLSFSVPQAYVRNRYQRDIPP
ERWQEGITAFRSNYSYSYSRYDSRGASFQSFSGLFDSGLNVGGWYFRNSAFFSLAGGRRELRSQRSTLQTDIPSWRARLV
LGDIYAGSEYFSPYQVRGFTLASDPAMLPYSERLYRPTVRGVAATQASIKILQGGNVIYQASLAPGPFAIDDYSPIGYGG
DLTVIVTEANGAVQRFVVPFGNAVRLIRKGQLQYALTAGRYARGLQAAAAPWVAQASGRWGLQDGVNLYGGLLGAHKTYA
AMTLGAAFNTPVGALSLDTTWAYARPVRQNSFYGTSYRLSYSKTLESSRTVVRLATLRYSSEGFWTLSDSLARQFTPLRP
GRPRGEFSLAVSQPLGAYGSLYMSGALRNYWRSTARQTQWELGYGTRVKGVGVYLSASFSNGSFGPDRQVMLNFSIPLSS
DASSGSLRTSVLRTRNRGSNERVSYEGTVGQSRALSYGLDVTRNADRSTTYGLSANYLGRYGQIAGAFTQQPSGSQVFVN
GSGGLVAHRGGVTLGQTLSDSVGLIDARDAGGAAIANTRNATVDARGYGLVGLSPYSLNEVQLSPENLPLDVELQSTVEE
AVPRAGAVVPLVFKTRRERSALLLVDSGARERLPFGSPITDSKGNTLGTSGQGGRALLRGLPDQGEVHVRLRDGSVCITP
YRLDDNTTRGEGRLPRIVMQCELNHATP
>AHV94103.1 aminotransferase class-III family protein [Bordetella holmesii ATCC 51541]
MAIRGSGVWIHDNAGRSYLDGSGGAAVSCLGHNHPDVQAAMHAQIDAISYAHTSFFTTDVAERLADRLVADAPAGTSHAY
FVSGGSEAIEAALKMARQYFVEIGQPERRHIVARRQSYHGNTLSALAVGGNAWRRAQFAPLLIEVSHVSPCYAYRDQLPG
ETDDHYTDRLAAELEEAFQALGPASVMAFVAEPVVGATAGAVPPVPGYFRKVREVCNRHGVLLIADEVMCGMGRTGSLYA
VEQESITPDLITIAKGLGGGFQPIGAVMVQHHIVEAMRTGSGFFQHGHTYLGHAVACAAALAVQDVIRRDQLLARVRLQG
EGLMQRLHAALGEHPHVGDIRGRGLFVGVELVAERDDKTAFDPALNLHARVKREAMARGLMVYPMGGTIDGRQGDHILIA
PPFIISDDELDQLTERLHGAIDAAIAG
>AHV94104.1 molybdenum cofactor synthesis domain protein [Bordetella holmesii ATCC 51541]
MMEFDEAQAQLAKAADAITRREILPLASLAGRVLAQDIQAGLDLPPADNSAMDGYALRYADYEAGRALPVSQRIFAGDMP
AVLPPGQAARLFTGSLMPPGADTVVMQEDTRETDGKVEILQPPRAGQHVRKRGEDTTAGQALLAAGTVLQASHIALLASQ
GLAQAEVYGRLRVGILTTGDELVFPGSPRQDQQIYNSNGAMLAALAEGMGAEATHVLHARDEQASLNAAFARLLQDCDLV
LSVGGVSVGERDLVKPVLEAMGATLVLWKVRMKPGKPVALAHIQGKPLVCLPGNPVSAYAVFTVLVSPLVRRMQGRSTTH
PRVDWIPLRTEHTRRDGREEFLRVQYDAGQAPQLHPYAKQGSGVMSSLPWASGLARLPYDTDISDGTAVRYYDFRYWQS
>AHV94105.1 hypothetical protein D560_0815 [Bordetella holmesii ATCC 51541]
MQSSHAAQQAFLSTLGVPRADHARRILTLFCYPEAPYRELVQALRRWPTLVIVPQGVAPGLEDAAGGEVQIARIAFVTQP
DFDRLLWCADLNFVRGEDSFVRAAWAARPLVWQIYPQQENIHLEKLQAWLARYPAPPAAHHLLRAWNAPATGTDWATTLD
AALQGQAWDAWRQSASDWDAGFAARQDLGDALADFCASLTKTR
>AHV94106.1 N-acetylmuramoyl-L-alanine amidase family protein [Bordetella holmesii ATCC 51541]
MPRLAAALVTCLMLAACASTVDRSVTATGQSSRVRYIVLHYTTADDAESLRLLSQTQVSAHYLVSARPDARVYQLVDENR
SAWHAGASRWFEQNSLNFTSIGIEIVNAGWQKQADGTLLYAPYLPAQITALSHLLREIAGRHGIRPENIVGHSDIAPQRK
LDPGPAFPWRALAQEGIGRWYNEDEAATQLLRLQSASLPDVAWFQTELARLGYDTPRHGKLDRATRNVLTAFQMHYRPTH
YDGQPDAETAAIMKAMKAQP
>AHV94107.1 mviN-like family protein [Bordetella holmesii ATCC 51541]
MKALLSKLGNIHPDQQRIFRGAFRVAVFLILGKAAGAIKEMAVAYRYGISDAVDAYQFTMTMATWLPVTIVGVLSVVLIP
VLVRLRREGGDERNVFVSELQGWTLLAGLALAGLTWAAWPYVLAWLGPGLPAAVSAMTHALLWAFVPVSAILLIAGISAA
RLRSHERHVNTLLDSVPAVTTLGWVMLAGAGGDQIGPLLWGTLVGYVIQAVWLAWLAARADQGFWGRRG
>AHV94108.1 SURF1 family protein [Bordetella holmesii ATCC 51541]
MARPHSPRFTLISLFLLAAVVAACLSLGAWQLRRAEARKAVSSAIERGRSQPPVTLNAAGGSGDFSAWRPARAQGRWLAQ
YSVWLDNRNQDGRPGFWLATPLVLAPQATAVLVLRGWVPRQPGATPLAPATPAAEVTVQGELASHVPRLFELWNMGGGAT
LPVRLAPGQLPTVQNLDLQAYAQATGLKLLPMVLMQTSDAEDGLLRAWPEPSVDFHQNQGYALQWFSFATIAALAWVAVA
WRAWRRRARPST
>AHV94109.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV94110.1 endonuclease/Exonuclease/phosphatase family protein [Bordetella holmesii ATCC 51541]
MSLIRVVSYNIHKGRSSLGRHESLNDLRLGLYGLRPDLVFLQEVQGRNETSSMLHAQHESLGAALHLNVAYGRNAVRDAT
DHGNALLSRYHILDHFNQDISDHKLEQRGLLHARIDVGGTEVHCLVVHLGLFASSRQRQIQALIERIRAEVPDGAPLLIA
GDFNDWGDKLAPQFVQQLGLYEVFSHAPRSSGGELPRLRDSMRRLSDVLRGVPGNSAVIERSNQLGMGGAYCPLPPPRTF
PALFPWFRLDRIYQRGFAVRSARVLRGRQWARLSDHAPLLTELELP
>AHV94111.1 aminotransferase class IV family protein [Bordetella holmesii ATCC 51541]
MNVFFVFADGSLQTPPLTGTILPGITRDSLITLARDLGMTVREEPYAIDQWEADAKSGKLVESFACGTAAVVTPIGQVKG
RQHGFTIGSGAVGEITVRLKAALEDIQRGRSEDKHGWLHKVA
>AHV94112.1 glutathione S-transferase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MKLIGSLTSPYVRKVRVVMAEKKLDYQLEIENVWSPDTQTQQFNPLGKVPCLVMEDGGALFDSRVIVEYLDTLSPVARLI
PQPGRERAAVKCWEAIADGLLDACVTIVKENQRSEAQRSTDWVERQYGKIRAALRAMDGSLGDNAHCMGVNYTLADIAVG
CALGYLDLRFASLNWRADHANLARLNEKLSARTSFTDTLPPA
>AHV94113.1 protein-export membrane protein [Bordetella holmesii ATCC 51541]
MNRYPLWKYITVLVAVVIGLLYTLPNFYGESPPYRYPAPRPPSR
>AHV94114.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIP
LRGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV94115.1 fe-S protein assembly co-chaperone HscB [Bordetella holmesii ATCC 51541]
MAVDDHFSLFGLPATFELDDRALEAAWRDVAARVHPDRFATASAPERRVAMQWSARANEAYRQLRDPLLRARYLCEAAGV
DLQTESNTAMAPGFLMQQMEWRELLDDARHDEQARLTLNAELEDAREAMRQTLADLIDRRKDYPAAGQKVREWMFIEKLA
QELASIQP
>AHV94116.1 translation initiation factor IF-2 [Bordetella holmesii ATCC 51541]
MSSNTVAQFATELKMPANVLLDQLRSAGVDLKSVDDTVTDSDKAKLLDSLRRAHGATDGKKITLTRRQTSEIRQADATGR
SRTIQVEVRKKRVFVKRDPAELAAEAAADAQAAAEQAAADVSAEAFDAVEIASQVQEPQPAAADAGVQAQDTKTEPAPAD
DAPKADTQPEAAAIEPAPQAQVAASPEPEQVAEPIKSQADEAATETPAPTETSAPAPAVKAEAEPQSAQPAASREQSTAQ
PVEPEAKKESVAAPTTQEAGPESVVQAQNEINSKSPAQAAKSESTQTLSKAELARPQVSADAARRAAAASTAPGAREDAR
RKAEAEAAALREMLNRPRKVLRAPEPEPAAPSTPALSGTLHKPAGKKDAAAAPKKEGGANKPAAGAGGKKTIKTAEVSST
WSDDASRKKPTDKAATTPATRDGWRAGGKGGGGGKGSRNHGRNQQNDRRNEPAAQEFIAREIHVPETISVADLAHKMSVK
AAEVIKQLMKLGQMVTINQVLDQETAMIVVEELGHVAIAAKLDDPEAFLDETPAATEAEVSPRAPVVTVMGHVDHGKTSL
LDYIRRAKVAAGEAGGITQHIGAYHVQTDRGSVTFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAK
AAGVPLVVAVNKVDKPDANPERVKQELVAEQVVPEEYGGDVPFVSVSAKTGAGIDELLENVLLQAEILELTAPVEAPAKG
LVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKPIQAAGPSIPVEIQGLTEVPAAGDELISLSDE
RKAREIALFRQGKFRDVKLARQQAAKLESMFDNMGEGKQTLPLIVKTDVQGSQEALVNALTKLSTDEVRVQVVHAAVGGI
SESDVNLAIASNAVVIGFNVRADQSAKKLAENNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKKEEIIGQVEVREVYTISR
IGTVAGCMVLDGLVRRDSQVRLLRNNVVVWTGQLDSLRRFKDDVKEVKSGFDCGLTLRGSNDLQIGDQLEVFEIKEIART
L
>AHV94117.1 queuosine biosynthesis protein QueC [Bordetella holmesii ATCC 51541]
MQNHQRRALVLFSGGQDSSTCLAWALQRYAHVETVAFDYGQRHRIELDARLNVLREFRARFPDWAARLGEDHLLDLKVLG
QVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALGYRRQLDVLVGGMCETDFSGYPDCRDDTIKAQQVALGLGLG
ARVTIETPLMWLDKADTWALADTLGGPDLVQIIVQESHTCYLGERGQRHDWGYGCGECPACSLRKAGWLRWVARAED
>AHV94118.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MMRLSLLSLLLPVLLGACASNYSTTANGISIADAPKAINRVFSDFDGLVDDANRAINRSLNGDSSTQGKTK
>AHV94119.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MVFTLVVGNFALSIMLGSRVPLLSVMTYNTFVNEMGGSPTLQSAMSVVSIGIVAAVLFVQKRMVERKVYTMTQGRAPAPR
RVRSWAAAGYAGGVTLVVLLSMLPLVVVFIAAFTHTSGPVMHWGSWSLTSMQRALQGAPEPILNSITFSSLATLIGVAFA
LLASYLTVKKRSRATQFLDYILVLPLTISGTVLGIALVQTFNTGWLVLAGTSAIMVLCYTVRRLPFAVRNASSTLFNIPD
SIEEASISLGVSPLKTFFKVMLPAMKASIISSAILMWLTTISELSASIVAYSGGLETMPIAIFRQVDGGRLGMASAYGAA
LVTVILVPVVVSIKAFKVNLFSGK
>AHV94120.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MNQAQQSSLRDAERYDYVIVGSGAAGAILANRLSARGATVCVLEAGPPDHSPWLHIPAGFIKAVFNNKYAWQFSSEPTDL
TNGRRATLTTTVPARPASATFSAPSIVAGA
>AHV94121.1 mobA-like NTP transferase domain protein [Bordetella holmesii ATCC 51541]
MRAMILAAGRGQRMRPLTDRTPKPLLPVAGKPLIVWHLERLAAAGFREVVINHAWLGGQIESALGDGQAYGLTVRYSPET
VPLETAGGIVRALPLLGEAPFLVINGDIWCDWDPAQAGAAAAQLPARGAWLLLVDNPPQHPAGDFLLAADGQVSSAEGPR
LTFSGIGIYDPALFQGMAPDTPAPLAPLLRAAMGQGRVRGQHHQGRWTDVGTPERLAALDQSLRDQ
>AHV94122.1 phosphatidylglycerophosphatase A family protein [Bordetella holmesii ATCC 51541]
MRERSRVDYPSLAWICARPGRFLAFGLGSGLIRPASGTWGTLAAWVIWLLLPPIPNLAMGILLALAFAYGCWACGYAGKE
LRVHDHVGMVWDEMVAFWLVLWLVPGGWMAQLLAFVLFRFFDIVKPPPIKTFDARLSGGFGVMWDDILAAVYALLVMAFV
VRLGVLA
>AHV94123.1 sodium/hydrogen exchanger family protein [Bordetella holmesii ATCC 51541]
MELLTILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRRE
VFGAGTLQMVVCGALLGAVFGAGLRHLAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAI
PMLVAAGLLGSDGDSAPSFEAALVAVVVVLAC
>AHV94124.1 acyltransferase family protein [Bordetella holmesii ATCC 51541]
MQNPCWISKPQKLWGRVAKNYYWVSFAKALAMLGVVGIHVAGYTAAATGARSVFVGKLAILIATLGLCAVPLFVMISGVL
LLDPEKFTTLGDFIKKRLSRIAVPLVFWHIAYYFFIVCYLQWNLSVSQAISNSIDGKLYTALYYFWIILGLSVFTPILIP
YVREKNNKILLAALVACCIPVFTTALAPFRPGVTVFVHTPWTWWIPYLGYFLLGWALKDVVLTCRWLIVALCILLVTVFG
LYSTWSRVDVSILVSALWPSSYYGLADLLPVISTKSM
>AHV94125.1 hypothetical protein D560_1224 [Bordetella holmesii ATCC 51541]
MSIAWQSFTPGTALAGGVLIGAAAALLMATLGRIAGVSGILGALVPPAAGSA
>AHV94126.1 S-adenosyl-L-methionine-dependent methyltransferase family protein [Bordetella holmesii ATCC 51541]
MSSAYTPLIPAQPDLDGAGRLVSRSYGDVYNGLTDALGQARSVFLGGNDLPHRWRGRQGFTVCETGFGLGTNFLALWQAW
REDPARCAHLHMVSIEGHPFTREVYRDLCNSHVPEPLRGLARELAAQWPALLPGMHRLEFEGGAVTLTLAFGSIDRMVPR
LSACVDAFFLDGFAPRVNPAMWEPGLLRRLLRLGSADATLATWCSAGFVRRALQAGGFDVERMPGVGGKHHITVGRRSAW
AHKHAPTHALRPRAPVIVVGAGLAGAGVAHALALRGVAVEVIAAAPLAHGGHLAAAMTPIVARDDNARARLARAGSQRAL
RRWEDMPAVRRVGALQLERDAGRTAALGETLRILGLPADWVREVGRDEACALAGLPVARGGLYFGDGMLVQPQRLIDGLL
AQPAIARIDGTVARLARTGPHGWQALDEAGAYWPRANISCWPTALARRRCCRPAACWMTCRAWRRCRRWPARSRTCPLSR
STAGHAASSPVKAICCRPSRVGAWLAAPTLSRCKRA
>AHV94127.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MRRQLGNSFEAADLAHDVFVRLLGRPTIETREPRAYLSTIARGLLVDHWRRRELERAWLEVLANTPQELAPSPESRMLVL
EALIKIDQMLDSLKPKVRQAFLWAQLDGMRCPQIAERLGVSLATAERYVAAGLRQCYTHRFGAP
>AHV94128.1 antimicrobial peptide resistance and lipid A acylation PagP family protein [Bordetella holmesii ATCC 51541]
MFRRFFIGLILCLPALSHACDSLPSWAQSACQRLDQIWTEGGDDLYVSGYAWHNRSMYSASKIRSFNEKAWGGGWGRSLY
DEDGDWQGLYAMAFLDSHRKVEPIAGYGFLKIGKVSENFRLGTGYTVFMTARHDIMSYVPFPGILPLVGAGYKDAMLYAT
YIPGGKGNGNVLFVFGRWHF
>AHV94129.1 MBOAT, membrane-bound O-acyltransferase family protein [Bordetella holmesii ATCC 51541]
MAVIITMTPLLLVKTGTTHLPAMLGLSFATFRAIDVLLFAHRDEPLSPLDYFIYLFFPLTLLAGPMYRWRSFQADLRRGY
DGVKLDTWLGGLELTLLGIIQKFGLAEAIWRYGLSTLDAHDYSFTGVVSNATLYSFYLFFDFEGYSNMAIGIGMLFGFVL
PTNFRNPLASANPQDFWRRWHISLSEWLRDVVFMPIYKALAKTAFFGRHRLAAQNVGIFATLLAMGIWNGLTWHYVVSGL
MFGSYSVGHNLLINAARSRPPLAAWLAHAWVKFAGRVITLILAALALYVFSGRSPI
>AHV94130.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MNMLYRNYDRSALDVQYNARATVPDIQAILKQYTDESRQARHALHCLADISYGPHPDERLDIFPAAQSDAPVFFFIHGGY
WRALSKDDSCNMAPTFTAAGATVVVLNYSLAPSVTLDRIVDQTRRALTWVYTHIAQYGGDPRRIHICGSSAGGHLVGMLL
AAGWQNAHGLPDDAIHGACALSGLYDLRPLIHTHINAWMHMSQADAERNSPALLPLTVRGCPLIVAYGESETDEFKRQSR
NYLSQWQAAGYPAHYVDVPDSNHFDLVLKLNDAQAPHTRAVLEQMGLRA
>AHV94131.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MRKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMR
GLPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQVKSLIENWRVEYNT
DRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94132.1 ftsX-like permease family protein [Bordetella holmesii ATCC 51541]
MKAWLRQHRYALAITLKRLGAQPFSWLANLLVMALVLALPLLGSAVLVSVQPLARQISVTPELTLYVQPTAPAGTAAAIT
ERIGREFGDQIAAVRLMPRDQALKTLRQNPAWSGALAVLPENPLPDAVVVTLAGGDDLAQRAGVLADGWRKWQYVDQVQL
DSAWVQRLEAILRFASLGLGFLAICVAVVVLATVFNTVRMQALTQREEIAVARLVGATESFVRRPFLYQGALSGALAALL
AIAAAAAALVPLNQAVLRLARSYSTEFALHLPEVPALAAAVIAAGVLGALSARWSVTRSTRF
>AHV94133.1 hypothetical protein D560_0789 [Bordetella holmesii ATCC 51541]
MATALHACVIAPLLNCNWSSVTLLSNIAVAATLLPLAPS
>AHV94134.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Bordetella holmesii ATCC 51541]
MSAQISSVADDAVSDFGIASVPEIIAELRAGRIVILVDEDDRENEGDLVMAAEFVTPEAINFMVTHGRGLVCLTLTEDRC
RQLDLPLMASRNGTRYGTNFTQSIEAAEGVETGISAADRARTIQVAVARDAKPSDLVQPGHIFPVRAVPGGVLVRAGHTE
AGCDLTAMGGLTPAAVICEILKPDGTMARLPDLVQFAHEHDLKIGTIADLIQYRSEHESIIQRVGERQMQTPWGEFRAIA
YRDDATGAPHLALVHGKIDPSQETLVRVHEPASLLDALDTGASPHSWGLGQALTAIAAAPAGVMVLMNCQSSTEHLFGQI
AHWGRSAEQAPAQDGDRFGLRTYGIGAQILRDLHVGQMRLLARPRKMPSMAGFSLTITGYDCPPPRNTDE
>AHV94135.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MLVFTLRRWVKQSWRLSVVAAMALLSAGADVLTPMYAGRLVDALVSGSPGEQAVWHAALTAFWMLVALGGAAPCCARSRF
ATSFRLR
>AHV94136.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MSFPPLNIRPFAPQDEQAVIGLWRDCGLTRPWNDPHKDVQRKLTVQPEWFLEGQAQERVVATVMAGYDGHRGWVNYLAVD
PLFQKRGYGRALMEAVQARLLAAGCPKINLLVRSDNAAVQHFYHALGFTPDDVISLGKRLIPDAGDQALR
>AHV94137.1 putative pilin protein [Bordetella holmesii ATCC 51541]
MLMAILATMPALPVQAQSAPAVAAAANAPGEIVVAVKGQEPLRLNATPARIAVADPEVADVKVLGPEPNRAGEVIIIGRK
PGATELRIWARGQRDPQVWVVRVASDVQAALAARGVQPGAFVDRAGDRGVVNRVAPSAEAHRGAVEAAGGDKQVVDVSQI
NTSGVVQVEVKVVEVSRTVMKDIGVSFNAGGSRFNGGVSLLPDLAGGFWGR
>AHV94138.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bordetella holmesii ATCC 51541]
MALREADVQYHLGCASQFDEALLDGVSQLVLSPGLSPGQEPAASLLRAAATRGVEVVGEIELFARALARLAEARDYRPRV
LAVTGTNGKTTVTALTRQLIEASGLSVRAAGNISPAALTALMEALDQDQLPDVWVLELSSFQLETTRSLSADAAVVLNVT
QDHLDWHGSMQAYSQAKARLLTMACVAIVNRDDPLTTAMVSDLKGLNARSFGRDLPQWVGDMGLELGQGVSWLVACEPSD
FDDQAAPVRRKKDAPPPVRNAGRMSRLMPVDALRIRGVHNALNALAALQLARVLELGWGALLRALREYAGEPHRAAFVRN
VGGVDYINDSKGTNVGATVAALEGLGQSVVLIAGGQGKGQDFSPLRAVVARHARAVVLIGVDGPAIGDILADTGVVLVQA
QDMREAVRRSAELAQAGDAVLLSPACASLDMFRNYPHRGEVFAQEVDELARDQGEVA
>AHV94139.1 chaperonin 10 Kd subunit [Bordetella holmesii ATCC 51541]
MALRPLHDRVIVKRLDNERKTASGIVIPDSAAEKPDQGEVLAVGPGKKTEDGKILPVDLKVGDKVLFGKYAGQSVKVDGD
ELLVIREEEILAVIQ
>AHV94140.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MSASQDSTGWDLRALRIFSLVARHGSITKVAIDLGVSQPAVSRYLSMLEKQCGGYLFTRNGRGVSMTELGKQVLPMAEQV
LASADDLNDVVAAAQGRVSGLVRIGTLPSLSEQLVIPLILRVQREHPGIQLQIVESAAGQIESWLHRREIDIGLPYRSHD
ALGNDEDVLLRLPSYLIGPPGDRVTATAQVPFARLHGLPLVLSRKPSSVRMMLDEMGRRHNIDIRVLVEADSGFIQKQMT
IKRAGYTVLPWHVVSAEVSRGELQAAEIVEPSVLRIVSLMLTDRPTQAVKVVAALLRDLALEATPRLAVRPGQQNALSAG
WYTRRHS
>AHV94141.1 carbon-nitrogen hydrolase family protein [Bordetella holmesii ATCC 51541]
MERARAGGAQALVLPEGVLARDITDPDIVKRSAQPLDGPFLTALLPYTQGLTVFFCVHVPAPDGKVWNTQVALRDGRVIA
QYRKLHLYDAFNMQESINVLPGADIPALVDVAGLKIGMITCYDLRFPELPRRLVLDGADVLVAPSAWVKGPLKEMHWEVL
SQARALENTCYVVAVGECGPRNIGASMTVDPLGVIIARAAETDALVFADIDPTRLAQARQALPVLQNRRFGRPELA
>AHV94142.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQVRIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>AHV94143.1 dTDP-glucose 4,6-dehydratase [Bordetella holmesii ATCC 51541]
MKILITGGAGFIGSALIRHIVRDTQDSVVNVDKLSYAGNLASLQECASHPRHSFERVDICDGAALQAVFERHRPDAVMHL
AAESHVDRSIDGPGQFIQTNLVGSYVLLEAARTYWAGLPQPARENFRFLQVSTDEVYGDLGLRAGRFIETSPYAPSSPYA
ASKAGADHLARAWHRTYGLPVVVTNASNNYGPCQFPEKLIPLMLVSALRGWPLTIYGAGDQVRDWIYVEDHARALCAALR
LGRPGQTYNIGGSCELRNLEVVQQLCDLLQVLRPPKMGHYRDLIAHVADRPGHDRRYALDSGKAAAELGWTPREDFGSGL
AKTVAWYLDNPEWIADVESGAYPARWTGANAS
>AHV94144.1 pyruvate ferredoxin/flavodoxin oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MITQQMAAEGIQRIIIVTDEPEKYQGVTGLAPGVPVKHRDELDGVMRELREYPDVSVLIYDQTCATEKRRRRKRNAYPDP
ARRVVINERVCEGCGDCSEKSHCLSVEPLETEFGRKRTINQSSCNKDFSCLKGFCPSFVTVEGGKLRKPRALASEGDIAA
GVPEPRPASIEGHYGVFIAGVGGTGVVTIGQLIGMAAHLEGKGCSVLDMAGLAQKGGAVYSHVVLAPTPGELMNTRVAMG
EADLVLAGDLVVGTSQEAVARMRPDRTRALVNTDVAPTAAFVHNPDWTLPGSDLQGDLSRVCATVSQIDAAALAVGLLGD
AIYANPLMMGYAYQKGWLPLGEEALLRAIELNGQQVPNNLAAFAWGRRAAADLAAVQALIGLAAAKPQAEIVEVRRGDNA
VVDFKRPANELAQRVQVRRDFLTAYQNAAYAKRYTDLVDQVAQAERTATGTTRLAEAVAHNYFKLMAYKDEYEVARLYSD
GEFLKKVAAQFEGDWKLKFYLAAPLTAKRDEQGHLQKRAYGPGMLRVFALLARLRFLRGTALDVFGHSAERRAERELIRE
YAQHMTAVMGKLNRGNLEQAVALASLPQEIRGYGHVKEAAMARAAHKRELLLREFSAAVLPLGGARAA
>AHV94145.1 acyl-phosphate glycerol 3-phosphate acyltransferase [Bordetella holmesii ATCC 51541]
MFAVLLIVLAYLIGSIPFAVVVSKLMGLQDPRSYGSKNPGATNVLRTGNKLAAALTLLGDAAKGWFAIWLAVKLAPGLSP
LTYALVMLAVFLGHLYPIFLGFKGGKGVATALGILFAVSPWLALATVATWLIVAVVSCYSSLAALVAAFFAPVYYFFGGG
VAWSMSTPAAVALVAISALLFYRHSANIDRLIKGKESRIGGKKA
>AHV94146.1 bacterial extracellular solute-binding s, 3 family protein [Bordetella holmesii ATCC 51541]
MKIAALVALGALSLAGVQGAQGATLDVVKKRGQVVCGTTTGFAGFSAPDAKGVWQGLDVDLCRAVAAAVFGDADKIKIVP
LNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGITHAGINFYDGQGFLVPKKLGVKSAKDLNGATICLQTGTSNENTLAD
WARANKVSYKPVVIETFNEVVNAFASGRCDVFSTDASGLASIRISKLDKPDDYVVLPEIISKEPLGPFVRQGDDAWLNVV
RWTLSAMIEAEEYGLTSANVDEQLKSENPNVRRILGVTPGAGANMGLDEKWAYNIVKQVGNYGESFDRNVGKDSPLKISR
GLNSQWTQGGLMYTLPIR
>AHV94147.1 NADH oxidoreductase (quinone), F subunit [Bordetella holmesii ATCC 51541]
MNAPELFKQLGTGLTVDPGADLSTSMIFHGRHLGPQILDGLNGENWHLEDYVKRGGYEALRKILTTGLKPEDVIAEVKAS
GLRGRGGAGFPTGLKWSFMPRAFPGQKYLVCNSDEGEPGTFKDRDILRFNPHIVIEGMAIAAFAMGISVGYNYIHGEIFE
VYERFEAALEEARAAGFLGDKLLGSDFSFQLHAFHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINN
TETFAAVPWIIRNGGQAYLEVGKPNNGGTKIFSITGDVERPGNYEIPMGTPFSKLLELAGGMRGGKKLKAVIPGGSSAPV
LPADIIMDCTMDYDSIAKAGSMLGSGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRMVHRIETGHGRP
EDLDLLDNVASNIMGRTICALGDAAAMPVRGFIKHFRDEFAHHIEHKSCVVPQYL
>AHV94148.1 3-oxoacid CoA-transferase, B subunit [Bordetella holmesii ATCC 51541]
MSEKLSRDAMAARVAQDIPEGAYVNLGIGLPTLVANHLPAGREVILHTENGMLGMGPAPAKGQEDYDLINAGKQPVTELP
GCSYFHHADSFGMMRGGHLDICVLGAFQVSQQGDLANWHTGAPDAIPAVGGAMDLAIGAKQVFVMMDLLTREGQSKLVQA
CTYPLTGVGCVSRVYTDLAVFDINKDGVTVTDLFGGVTPERLLELTGLPLKFTN
>AHV94149.1 flaG family protein [Bordetella holmesii ATCC 51541]
MPIRPINLVPQVQTPSAAGAAPSVDQAALLPGANTDRDAVDDPAADAPRQTASADLALQEINQQLQAWSTELQFEMDPDL
NRIVISVRDAESGEVLRTIPSEAVMRYAKTIVTLQGNTVETTA
>AHV94150.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94151.1 ATP synthase F1, epsilon subunit [Bordetella holmesii ATCC 51541]
MATLHVDVVSAEEAIFADEAKFVVLPGESGELGILPGHTPLISRIRPGTVKIVRADEGEENIFVAGGILEVQPGSVTVLA
DTAIRAADLDEARALAAREKAEEALRNAKDREDIAVVEAELAMLAAQAAAARRLRNGRNSH
>AHV94152.1 ferritin-like domain protein [Bordetella holmesii ATCC 51541]
MVKKLDPKQKSAAAQRRKRPLATPTDLAAAATRDISAALNQLLADVFALYLKTKNFHWHVSGPHFRDYHLMLDEQGDELF
AMTDALAERVRKIGGTTLRSIGHIARMQRVLDNDADYVQPLDMLAELRDDNKTLAAALREAHDVTDEYHDIASSSLLENW
IDETEKRTWFLFEASRQADSTGH
>AHV94153.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MPDHEFYTTFSQGFQLPDIGVQMRNARPGFDIASSDLEPVKINNYEVGWRGTFGRTSTSLAVFYTTSKLGDVQSFNNGLI
LTRTKERIYGVEATVDTSTDDERWGTGGTLTWMQGRELPDNGSWRDMTGYRIPPLKLSAYLQYRPNERWSARVQGNFQAS
RDYRLDGVASFGRRDVSSYFTVDLMARYQFTAKDTLTLGVENVFNRDYYPLYSQLMRSNTNTSRLPASGAVLKLIYQHRW
>AHV94154.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit [Bordetella holmesii ATCC 51541]
MALNEQDVARIARLARIELTPAQRARAQDELNGILHLIERLQSVDTQGVEPLAHPLSAHEDIVLRLRQDAVTEVPSDQRR
DELLANAPEQDGGLFLVPKVIE
>AHV94155.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MAMAGVSATVVLVAFDSTIVSTTLPRVAEALNGMALYAWVGTGYLLATAASILIFGRLGDMFGRKPLMLVSVSLVALGSI
ACGLSQSMGQLIAFRTLQGVGGGMMIATAFAAPADLFPDARERVRWMALVSAAFAMASGIGPVLGGAATQALGWRAAFFI
APIAAVAALFLLARYFPRIAPAHAKAGRIDWLGAFLLIVLVAAPLAAMELAFAPGDSARPKLAAGLALAALAAGCCLIPH
ERRVVSPIFPLRILAGAEPRLLNMAAVAVGATMFILVFYSPLLLQQVLHYSPSEAGLLLTPLVAAISLGSIINGRLFPKQ
AEPQRLMVFGGLLLAAGSAMVLATGEGTATWWIVAAFAVNGTALGFLLPNLTLFMQMLSDRRDVGVASALVQTTRAVGSA
AGTALVGIAISHTSVLIGVRIGLTLCLALSLVTAVIAHRIKMKNVITRRS
>AHV94156.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MRAPRLIPTALALALALSAAAHAQTSSQVTQLPAVSVKANDTAEDDLENLRVPVNSGALGNRSQLETPFATTVVGSTELR
DRQISKLGDVFALDASVNDNGSSSGAWASYLTVRGLQLDWQNSFRIDGNPFPTYVTVLPYEQLEQIDLLKGATGFMYGFG
SPGGMINYVTKKPTDDPLRAIDIGVQSNSLIHEHIDLGGRGGRTTVLVTASMPRTKRAAPTTTDPSTGPPLRWRWMPA
>AHV94157.1 universal stress family protein [Bordetella holmesii ATCC 51541]
MLKILVPIDGSECAVRALHDAIGLAKESGGDAQIHLLNVQLPIVSGHAKMFLSKETIDNYYKAESDEALATARAAAETSG
VAYTAEMRPGPLGETIAKYAKEHHCDRIVMGTRGLGAVGGLVLGSVAQKVIHLSPVPVTLVK
>AHV94158.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVLKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHLTCSP
>AHV94159.1 hypothetical protein D560_2140 [Bordetella holmesii ATCC 51541]
MLQDLDQLAARIGQLVQRTRQLHAERDALRIRLNDSDAEARALKQRCADREAELQALKEQMRDHSGALDLCKAESQQAEA
ALREQLARESADRLALEARIGEHERQMQHALAARDAEVQRLRLAASSARERIDAVLARLPGAAAGEQA
>AHV94160.1 merR HTH regulatory family protein [Bordetella holmesii ATCC 51541]
MLRYWEQEFTQLKPVKRRGNRRYYQHHEVLLIRRIRSLLYEQGFTISGARNRLGDTRDALHDSAEAAVRLSATELKSLRA
ELNDISASLSLAVNQPAAH
>AHV94161.1 methionine aminopeptidase, type I [Bordetella holmesii ATCC 51541]
MGIVTDQADLAKMRAACQDAAKILDFLTPHVKPGVTTGELDKLALHYLTDELKVKSATVGYAPPGYPPFPGAICTSVNHQ
VCHGIPGEKALKNGDVLNIDVTIIKDGWFGDTSRMYYVGEPSILARRLTDITFECMWKGISAVRNGATLGDVGHAIQKYA
EAQGFSVVREFCGHGIGQRFHEDPQVLHYGKPGSGVKLQTGMLFTIEPMINAGRREIRQLADGWTVVTRDHSLSAQWEHA
ICVTDTGCEVLTISPNMPRPPAFVPDTVIVPAI
>AHV94162.1 lysE type translocator family protein [Bordetella holmesii ATCC 51541]
MGALAFSLLNPHFWLDMVVVGSLAHGFADARLAFAVGVLTASVLWLAILGLGARLFAPVFSDARAWRLLDALIAVVMLTL
AYSLARVDLGG
>AHV94163.1 uroporphyrinogen decarboxylase [Bordetella holmesii ATCC 51541]
MSPALKNDVFLRALLREPVPYTPIWLMRQAGRYLPEYRATRAKAGSFMALARNTAYATEVTLQPLARFELDAAILFSDIL
TVPDAMGLGLDFAIGEGPRFAHPIRDEADVVRLAVPDMEKLRYVFDAVGSIRRELDGRVPLIGFAGSPWTIACYMVEGKG
SDDYRQIKTLLYSRPDLLHRILEVNAEATTRYLNQQIEAGAQAVMIFDSWGGVLADGLYQTFSLAYTRKVIAGLHREHDG
HRVPVIAFTKGGGMWLEEIASSGCDAVGLDWTVNLGQARRRVDDRVALQGNLDPMTLFGTTETIRAQARRTLDAFGPVGR
GGHVFNLGHGISQFTPPEAVAELVDEVHQYSRALHAK
>AHV94164.1 lipoyl synthase [Bordetella holmesii ATCC 51541]
MSTPLDASQSSNDTSTSAVSAYDPTQKQKSQAKTARIPIKIVPAERLKKPEWIRVRAAAPGSRFYDIKRILREHNLHTVC
EEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDAQEPENLARTIAALKLSYVVITSVDRDDLRDGGAAH
FVECITRIRDLSPSTRIEVLVPDFRGRLDRALGILNAGPPDVMNHNLETVPRLYKQARPGSDYMHSLKLLADFKLLHPDV
PTKSGLMLGLGETDEEILDVMRDMRAHNVDMITIGQYLQPSEHHLPVLRYVHPDTFAMFEREAYAMGFSHAAVGAMVRSS
YHADEQAHAAGVN
>AHV94165.1 aspartate-semialdehyde dehydrogenase [Bordetella holmesii ATCC 51541]
MVGSVLMQRMREENDFALIDPVFFSTSNAGGAAPKWAEGAGPLQDANDIEALKKLPIIVTAQGGDYTSEVYPKLRAAGWT
GIWIDAASTLRMADDAIIVLDPVNRPVIDAALKRGVRNFVGGNCTVSCMLMGLAGLFNNDLVEWMTSMTYQAASGGGAQH
MRELLNQFGILNQAVKPLLDDPAAAILDIDRGVLATQKDANLPREHFGVPLGGNLIPWIDKDLGNGMSREEWKGEAETNK
ILGRGEAFGTPATPIDGLCVRIGAMRCHSQALTIKLKRDVPLDEIEDMIAAGTQWAKVVPNTREATVEQLTPVAVTGTLD
IPVGRLRKLSMGPQYLGAFTVGDQLLWGAAEPLRRMLRIALSEA
>AHV94166.1 fatty acid hydroxylase superfamily protein [Bordetella holmesii ATCC 51541]
METLSQLFSQCQEWLFEAVVQPLLFHLGLASIIEDAYDGTMWLLVGLIQIVIMVTVFGALERWRPVEAVRDRQQVFVDVL
YTLVHRLGLFRILLFFTIEPLWDGVFGTLHTWGLATFQLDQIWPGVTDGPWTSLLLYLLIFDLVDYFYHRAQHRFAWLWA
LHALHHSQQQMTLWSDNRNHLLDDMLRDVVIVLVSQLIGVPPAQFVAVVAITQLTESLSHANLRASFGWLGARLIVGPRF
HRQHHSIAYDASAPAPGPAGGYNFAALFPVWDMLFRTARFDGDYGPTGIHDQLPQGGSRDYGRGFWAQQWLGMKRLCARS
RSRRSDRAPAS
>AHV94167.1 putative rRNA maturation factor YbeY [Bordetella holmesii ATCC 51541]
MQYAVSEARLPRWRLRRWAGYALAGAAADGLIAFTAAELNVRLVGQAEGRQLNAQFRGRDYATNVLTFEYGVDPLGTARG
DIVICVPVLVREAREQKKTFVDHAAHLCIHGVLHALGYDHIQARQAKRMEALETATLARMGIADPYLA
>AHV94168.1 3-deoxy-7-phosphoheptulonate synthase [Bordetella holmesii ATCC 51541]
MSHNTDDLRIREIKELNPPAHVMREFQCTKEVSETVFAARNAMHRILHGMDDRLIVVIGPCSIHDTEAALEYARRLKPLR
DQLSADLEIVMRVYFEKPRTTVGWKGLINDPNLDGSFDINKGVRVARELLLEINSLGLPAGCEFLDMITPQYIADLVAWG
AIGARTTESQVHRELASGLSCPVGFKNGTDGNVKIAVDALKAASQPHHFLSVTKGGHSAIVSTAGNEDCHVILRGGKAPN
YDAASIEAACQDLSKAGLAQRVMVDASHANSSKNPENQPRVADDIARQMACGDSRIVGIMIESHLVGGRQDLVAGQPLTY
GQSITDGCIDWDASVQTLERLALGVRERRRATQVSGK
>AHV94169.1 ATP synthase I chain family protein [Bordetella holmesii ATCC 51541]
MGAGAYFLPNALFALRLLINVVKSVPPNPLTFFLGEMFKLLITALLLWLIWHYTQAWLVWPAVLLGLILTLKGYLVLLMF
RKLS
>AHV94170.1 dihydropteroate synthase [Bordetella holmesii ATCC 51541]
MANSFLCGRFELDLERPLVMGIVNVTPDSFSDGGKHDDADAAIAHARRLIAEGAHILDLGGESTRPGAPAVPADEELRRL
LPVIEALRDCGLPLSIDTFKPQVMRAVLDAGADMINDIYGFRQPGAIEAVAQSRCGLCVMHMKGEPGTMQDAPEYTDLMG
EIGVFLGARAQRLRAAWVDPRRIVLDPGFGFGKTMDQNYQLLRRLASLRVSSYPLLIGLSRKSMIGAATGRPINERLPGS
IAAALACVARGASIVRVHDVAATVDALKVWQAAEQGALLS
>AHV94171.1 tripartite tricarboxylate transporter TctB family protein [Bordetella holmesii ATCC 51541]
MQQESRSERHEWAAGGAMIVLGLGAFALATTYQLGTLGRMGPGMFPAILGALLALLGVAIWRTRRQDGAETDAGPAPSQW
RGWACITAGLLTFILLGQYGGLIPATFGLVFISALGDRQHTLKTAALLAAGVTALGVAIFSWGLQLQFPLFRWG
>AHV94172.1 bacterial extracellular solute-binding s, 3 family protein [Bordetella holmesii ATCC 51541]
MTTRRQLLTAALTLGLTLTCSSTFAADTIRAVTDATFPPMEFVKDGKRTGFDIELVEALGQAMGKKIEWIDIDFKGLIPA
LQAGRADIAVSAIYITDDRKKVVDFTDPYYAGGLVVVTKKDGPIKSVKDLDGHKVSVQVGTKSVNYLRDNLPKVQRIEVE
KNQEMFNLVQIGRSDAAVTGKPAAKLFAQSTADLTVLAEQVTTEEYGIAIPKSKPELTAEMNAALKKIKADGTYDRLINK
WFEAPAK
>AHV94173.1 6-aminopenicillanic acid acyl-transferase family protein [Bordetella holmesii ATCC 51541]
MRMPLEDVLLWNCRGDLLRKTSDGCTSLAWRDPDGNCWMAHNEDGDPYLRGRCRIVDVHLDDAPGYVSFYYPGSLPGHTF
ASNRNGLTQTINNVRLRQRQMGVPRMLVARAVLDCTSLQEALDLLQTLPRAGGFHHTLGSAAEGRMFSVEATPAQCAVHE
ILKGYVHANHLIHPGSPPQVISDSSASRQRQAEYLLDAWRGSASGTDLVAALLDSTGSLPLLRTDPNDPDEENTLATALF
ALAEGNVTLSLYDRCPTSMLTLTISGTDDSAL
>AHV94174.1 ycxB-like family protein [Bordetella holmesii ATCC 51541]
MPAFFQAAVVAAVALVLLSLVFERLIPALARKNVRRAFKRDPENPFLGEHRLDFRPEGVTDAGERASGSLPWDLVREVEE
TSDYLFLFIAPTQGVIVPKRGQSEQDLRAVRDVLRAHVPRAVLSY
>AHV94175.1 carboxymuconolactone decarboxylase family protein [Bordetella holmesii ATCC 51541]
MADKQNPVQELFDQGLELRREVLGTEYVDGSLARANDFMMAFQRITTEWCWGYAWGRPGLEKKTRSMLNLAMLTALNRPA
EIKLHVKGALNNGVSAEEIKEILLHATVYCGIPAGLDAFKVANQVLEEEGAFKAQQA
>AHV94176.1 BON domain protein [Bordetella holmesii ATCC 51541]
MMPNAQRAARPLVLALALATACASLTACIPLVVGGAAASTAVVATDRRTSGTQLDDQNINFRVERQISQKLGEAARVNAM
VYNGQVLLTGDVPTEADKAQATTIAQGIEKVKSVSNQLTVGPAAAFSTRSNDTWLTSKVRTALINAQYVPSRTIAVTTDK
GVVYLMGMVTQSEGDYAANAVASVGGVTKVVKLFDIISREEAVRLSNNNNAKDAPIETGASSSQDGAASGASTSGSSANT
EGGIELMPIK
>AHV94177.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94178.1 hypothetical protein D560_0227 [Bordetella holmesii ATCC 51541]
MLTDIVTRALSQLLGNSLSGDVIKGRFRYAYASDDGRFVAILGHDLTTYVVDVDAQRYFAECAGVPCGFAGHVLEMEGAQ
EHGHPWPAVNDLFDLDMDGDEIAWRRCPGAVALAATRQAQSRVA
>AHV94179.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCSGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV94180.1 transposase family protein [Bordetella holmesii ATCC 51541]
MKKSRFTDSQIIEAIKRAEAGLAVPELCRELGISSATFYKWRSKFGGMDVSMMSRMKELEAENARLRKMYVEER
>AHV94181.1 doxX family protein [Bordetella holmesii ATCC 51541]
MNKSDDTGKLILRLALGILILMHGVAKLSTGVGGIAGMLSSHGLPGFLAYGAYLGEIVGPLLLIVGVFTRLGAFLVFANM
VVVLLLVHSGQFGNINPQTGGWALELQGMFLFTALALMFTGAGRFSLGGAGGRWN
>AHV94182.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYI
ESFNGKFRDECLNEHWFFESPRVS
>AHV94183.1 modulator of DNA gyrase family protein [Bordetella holmesii ATCC 51541]
MSVAPIAGRGSKMQRDYWYTSERDPALLASPEDVGRYAAERTLARLSARRLRTTKAPVLFEAPLALGLLGAFVQAVSGGA
LYRKATFLVDSLGKPIFADHIDVQEDPHVRGGMGSSAFDDEGVRTQARRVVAGGTLEGYFLSSYTARKLGMSTTGNAGGS
HNLSLTSRLTRPTDDFRAMLKKLGTGLLVTELIGQGVNYLTGDYSRGAFGYWVENGQIQHAVEEITIAANLADMFRQIVA
VGADTLSRGTKTTGSILIEQMSIAGA
>AHV94184.1 putative peptide ABC transporter ATP-binding protein [Bordetella holmesii ATCC 51541]
MTAATQSLAPLTLEVRNLRTHFQTRAGTLPAVDDVSFRLERGKILGLVGESGSGKSVTGFSIMGLVAPRAAWSMAAFCSR
AAT
>AHV94185.1 putative dioxygenase [Bordetella holmesii ATCC 51541]
MEQWEAMAKKLTDAGTDFVIEPYIRFKGEVGEQATMFFLDQSGNALEFKAFKNIESLFAK
>AHV94186.1 hypothetical protein D560_1488 [Bordetella holmesii ATCC 51541]
MPALWKLHRLTALLNIAGALLPAIVALWLLWPRRHVLTLSLVLITPVALLLLALFWLPSPGIAFALTWILLGFGLNKPRL
TGFGVLSLLAYLMLYYYQMEVPLLQKAVWLTGAAVLLFLLRILVWLVPRFMRTDGGRRVSVRQAPPSTRRRAAVVVAGLV
LVLGVCNVTIYQREQLLAHGEVAILELAPVDPRSLMQGDYMALRFAAATAVSKLHQADEGATDDGYVILSPDARGVAQPL
RIQPKVDPHAAPEMALQYRVRPNGVRIVTNAYFFPEGEAARYEQARYGEVRLDGRGTGLLVRMLDEDLQPL
>AHV94187.1 DNA repair RadC family protein [Bordetella holmesii ATCC 51541]
MNDAELLALALRTGQRGCNALELAQKLLVRHGGLRGVFATTAQELCDHPGLGSAKACALSVIPELSRRAIEETLRGRRAM
NHPEEVKRYCRTALSHRPIEHCIALYLDQQLQLLACGELAQGTLARASVFPREVVKEALRHHAAALILAHNHPSVSTRPS
SSDCLFTRQLRQALALVDIQLVDHLIVARDQVYSMAEHGQL
>AHV94188.1 periplasmic binding family protein [Bordetella holmesii ATCC 51541]
MVADKEFAQGWRMALEDINQAGGVLGRPVQVVPIKIAPGAPVPNVIALFDPEPDSAQALLTSRQAAAWQLPYLVVRAPSD
RLVWQEGNRYTFRLAPSSRMRIAALAPGHWPCDRHAGPLFMPLPRMGRSRPRRLLPHWRPSKPGTTSSAARPSPPVKSMQ
T
>AHV94189.1 formyl transferase family protein [Bordetella holmesii ATCC 51541]
MSPTQSTPCRFVILISGRGSNMQSLVQSCEEQAWPAQVAAVIASRPDAAGLEWAAG
>AHV94190.1 hypothetical protein D560_3111 [Bordetella holmesii ATCC 51541]
MRQHSEPQFSESIIKISDYTSNGQYPAIFGEIPRQSKRISSFRLLCLPSHGARDPDRDAPRQTPVLP
>AHV94191.1 putative ferredoxin, 2Fe-2S [Bordetella holmesii ATCC 51541]
MRQGYASLEEASDSEEDLLDKAWGLTSVSRLSCQAIIEEQDLTIEIPKYTINHAKEDH
>AHV94192.1 primosomal protein N' [Bordetella holmesii ATCC 51541]
MPASLSGEAVLEPGSRVIVPFGRRKLIGVVLELPEQPAIDAAQVREIEQVLQDLPPLPADWIRLAQFAAEYYQRPLGEVM
LPVLPPPLRKPSAYQGKRSGAGPVARLDARKPRAAALPVAPDTAPALNDAQAAAVTTIGSISGFKTVLLHGVTGSGKTEV
YLHAAQAALAAGRQVLLLVPEINLTPQLETALRARLEALIGQDGLAVLHSGLSDGERLQAWARVQRGQARMLLGTRMAIF
APMPDLGLIVVDEEHDASYKQQEGLRYSARDLAVWRGHERRIPVVLGSATPSLESWHHAQRGQYQLLTLAHRARAAELPR
MRLIDTRRLPMKHGLSPQLIDGITERLARGEQALVFLNRRGYAPVLHCASCGWVTHCPRCSAFTVLHRGGAKGGYRLHCH
HCGYQGPVPRACPDCGDQDLQPMGRGTQRIEEHLAELFPQARIARIDADSTRRKGSAQALFASVHAGEVDILVGTQMVAK
GHDFSRLGLVGVLNADSMLFAQDFRAPERLFAQLMQVAGRAGRHVGGGEVLIQTGYPEQTVYQALIRHDYAGFARHSLEE
REVTGLPPFAYQALLTSEAREVAQALEFLQAARQAGESLSTAITLYDPVPLRIVRVANVERAQLLVESASRPVLQAFLPY
WLDAIAPLAARLRARWQLEVDPLEI
>AHV94193.1 efflux transporter, RND family, MFP subunit [Bordetella holmesii ATCC 51541]
MRFSPQRVSGLGIVVALGWMLVGCGDKPQQSQSLPQVAVVTVQPQKASIVSDLPGRVDAVRDAQIRARVTGIVQKILFEQ
GGDVKENQVLFKIDPASYQASYDQATAQLKQAQADLYSAKLLADRYAPLVKANAVSKQEYDNAVASFRQADAVVAAARAA
QTSAKINLGYTEVTSPITGRIGKPLITEGALVEATSATQMAVVQQLDPVYVDFTQSTSELARLREAFASGQLQKLGPNAA
RVSIILENGSVYKSPGKLLFTGITVDPSTGNVNLRAEVPNPDQILLPGMYVRVRLDEGVDDKALLVP
>AHV94194.1 alanine-glyoxylate amino-transferase family protein [Bordetella holmesii ATCC 51541]
MDKPFEPAYSFSERAQQLTSSAIREILKVTERPEVISFAGGLPAPGGFPVEVVRAAFDKVLATNGRAALQYGPTEGYAPL
RQWVAQDLNSAGAHVTADQILIVSGSQQALDLLGKVLIDKDSKVLVEDPSYLGALQSFSLYQPCYVPVPTDEGGLIPEAI
TPELAAGARFLYALPNFQNPTGRTLDRARREALVARAADMGLPIIEDDPYGDLRYAGQPQPGLLALGTAVGATVIRLGTF
SKVLAPGLRLGYIAAPRAIIDKLVQAKQATDLHTPTLTQMAIYEIVKDGFLQEHLPKVREIYRTQGRCMMEAIKREFPDG
VSWTVPEGGMFLWVTLPAHIDSARLLAEAVEQNVAFVPGAPFYAGKPQANTLRLSFATVPEDKINTGIAILGKLLHKYV
>AHV94195.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MSTGLSTTETSLPAARRDYIPAALVLGLAVAALPLIGSWSTWLTLTVAGLAMGMIIFIVASGMTLVFGLMDVLNFGHGLF
IAIGAYMATTVLALMGGWTDSPSLWVNLGAIVPALLVGMAVAGAIGAVFERLIVRPVYGHHLKQILITMGGLIIGEELIK
MIWGPQTITLVLPTALRGAVLFGDAAIEKFRLLALAIGLGVLGLLLVVLNRSKLGLLIRADVEDREMVESLGYRIRHLFI
AVFVAGSMLAGLGGVLWGLYQQSVVPQLGAQVNVLIFIVIMIGGLGSTAGCLIGALLVGLMANYTGFLLPKAALFSNIAL
LVAVLLWRPQGVYPVTQPR
>AHV94196.1 grpE family protein [Bordetella holmesii ATCC 51541]
MTAPQEPVDQDASAGLPAEDVHAELAAVRAELAAAQAQVQSQQEQVLRAMAEAENVRRRAQEDVSKARKFGIESFAESLV
PVKDSLEAALAQPDQTVEALREGVEVTLKQLVGAFERNMLKEIAPAQGDKFDPHMHQAISSVPAGQPANTVVQVLQKGYA
IADRTLRPALVVVSAG
>AHV94197.1 transposase family protein [Bordetella holmesii ATCC 51541]
MAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV94198.1 glutamine--tRNA ligase [Bordetella holmesii ATCC 51541]
MTQTPTPHAASNYLRNIIEEDLAADRFQGKRWAGKPGPASVQAGGAPDPARIRTRFPPEPNGYLHIGHAKSICVNFGMAQ
EFGGVCHLRFDDTNPEKEDQEYVDAIMEAVQWLGFDWKADGNDNLFFASDYFEFMYEFAEALIEAGHAFVDEQSADQIRA
QRGILTEPGTNSPFRDRPAAESLVRLREMRDGVHPDGSLVLRAKIDMASPNINLRDPVMYRVRHTTHHRTGDKWCIYPMY
SWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFSRLNLSYIVTSKRKLLQLVRDGHVDGWD
DPRMPTLFGMRRRGYTASAIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPTTPRSVAVLDPIKLVITNYPEGQSENCKA
PINPHDPEAGHREFPFSRELWIERDDFREEPPKKYFRLFPGNQVRLKYGYVVRCTGFTKDEAGNVVEVQAEYLPDTKSGT
PGADSVKVKGNITWVSAAHAVPAEVRLYDRLFADPHPDGGDKDFLTCLNPNSIHTVRGWLEPGTRTEPGATWQFERLGYF
TVDSQDSRPEAPVLNRIVTLKDSWGT
>AHV94199.1 ABC-2 type transporter family protein [Bordetella holmesii ATCC 51541]
MNWYAVRAIYLFEMARAWRTLMQSVASPVISTSLYFVVFGSAIGSHMVEIGGVSYGAFIVPGMIMLSLLTQSVANASFGI
YMPRFSGTIYEILSAPISYVEIVMGYVGAAASKSVLLGLIMLATARLFVAYEVEHPVWMVVFLVFTAVTFSLFVSSSGCG
RMALRNCRSSR
>AHV94200.1 hypothetical protein D560_3098 [Bordetella holmesii ATCC 51541]
MKIWRDGPTRASCDVWAPRMREALKALGFPGEQAVDSVGYQVLGALGELLGDFAALAPAAGPLNGRGAVRLLISAARAGS
FQPQRDPRARLDVLGLLEAEGAVGMVSGYWD
>AHV94201.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV94202.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV94203.1 FAD dependent oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MNTEGSQKGYRSAADKAREELDVIVAGAGMVGAAIAYGLAGLGQRVLLIDGADTDYRAAKANFGLVWLQGKGLNHPHYQR
LSYRSVRQWPAFARELQEESGVDLHYERRGGLHFCLGEAELEARAARMQAWLRQAPEVGECVSILPRDALLRRYPGLALG
PEVSGASVGELDGHANPLRLLAALQSGFQRRGGQLWGNSPVHGIRALSGGGFEVEAGTRRARAARLVIAAGLGSIRLGPM
VGLDVPLRPQRGQILVTERLAPILPVPANGIRQTGEGTVMVGLTQEEVGFDLSTTTDAAVRMSRNALRVLPALAQARLVR
QWSCLRVMTPDGCPVYASSQHFPGAYIALCHSGVTLAAVHAGEYARSLAAGAPPSFLDVFHHERFNVQKVA
>AHV94204.1 imidazoleglycerol phosphate synthase, cyclase subunit [Bordetella holmesii ATCC 51541]
MTQTQGAAGAGLSSALTRRIIPCLDVTAGRVVKGVNFVNLTDAGDPVEIARRYNEQGADELTFLDITATSDGRDLILPII
EQVASQVFIPLTVGGGVRQVADVQRLLNAGADKISINSAAVANPELVRAAAAYHGSQCIVVAIDARRVSPPDQAARWEVF
THGGRKATGLDAVAWARRMAAYGAGEILLTSMDRDGTKSGFDLELTRAVSDAVPVPVIASGGVGNLEHLAEGVTTGRASA
VLAASIFHFGQHTVRECKAFMAERGIDVRLD
>AHV94205.1 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [Bordetella holmesii ATCC 51541]
MSSVIPTSLRRIVLASNNPGKLREFAALFAPLGIELVPQGELGVSEAEEPHLTFVENALAKARHASLATGLPALADDSGL
CVHALAGAPGVYSARYAQRETGAVKADSANNALLLERLQGQADRRAWYVALLVLVRHAEDPCPLIGEGHWHGEIAQAPAG
EHGFGYDPYFYLPDLGRTAAQLPPAKKNAVSHRARALSVVLSKLQAL
>AHV94206.1 hypothetical protein D560_0459 [Bordetella holmesii ATCC 51541]
MMVGMVVAIPAVFSYWFGHRPWGVRLTAWWFRIWWMLLVLLEVSTPQFIAEYDTRPNRLYFEYLVHLREVAGMLWEGYKL
VLLAAFLVLVLAAWAARRLFPVGRTDRRMAWWKRPIASLVTLAVVVLAIRGTLEHRPINPSVVAFSSDAMVNTLPLNSLY
NVLDAAYRLRDERSSAALYPPMPVDRMNAVVRQASGIEGPELDPGYPSVHAQTATVRRQKPLNLVIILQESLGAQYVGSL
GGANLTPELDKLGKQGWMFHRAYATGTRSVRGIEAVTAGYLPTVAEAVVKLPRSQTNFFTLASVLKAHGYHSRFVYGGES
HFDNMRGFFLGNGFDQIVDRKDFVDPVFVGSWGASDEDMFTQVDRLLRQGGDQPVFTLAFSVSNHSPWEYPAGRITLQGE
PASVENTVRYADWALGQFFEKARQAPYWDDTVFLVIADHDSRVFGANLVPVRHFQIPALILGGSIAPRQDDRLVSQIDMA
PALLSLMGVDNVNPMLGSDLMQRDPDRAIMQYGDNYGYLRGDSLVVIEPRKTPESFRYVRLPRDQQDRFEPIAGDPALTE
EALAYALWPSWAYREERYRTPAQ
>AHV94207.1 sulfur transport family protein [Bordetella holmesii ATCC 51541]
MQWPTAWKIDTRLVSGAVIFGLGWELAGLSPVTAVLTASQGYDEALTFGLAMVVGMGAFSFWQKPTSERHR
>AHV94208.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MDLAMRLGLEPHLEKRFEQMSTGTRRKVFVAAAAIGNPAVVVADGPSQGLDAQARDVLAETFRL
>AHV94209.1 hypothetical protein D560_2511 [Bordetella holmesii ATCC 51541]
MASQADAEHDLQTKALRRRMAWDVVMVLSWGAAIPGLMWLGAAFGF
>AHV94210.1 repressor LexA [Bordetella holmesii ATCC 51541]
MATKLTDRQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKGPEPSAPSQA
LLPHPALAQLLLPLVGRVAAGSPILAAEHVEREVGVDPGLFAQAPDYLLKVRGMSMRDAGILEGDLLAVKKAAEARNGQI
VVARLGDDVTVKRLQRHGSRIELLPENPEFAPIVLSPDDEFALEGIAVGLIRTHSLH
>AHV94211.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MFVARWKKICAPYPAEVIHLALERIDRQAGELATAFYETMLADEAAAYFLSDQLVHQKLHASLQSWLRTVFGAAVHHDYA
SAVTFQQRVGEVHARIDIPFYLVMQGTRMLINHLRAGVAHDDDVPQTLRWPLADYLGEIMLFSIEMMSLAYANSHDRNAR
AEEGYRLLSLSQNVGTEKERQRAALLDWENQLLFGLSVGDSRAMLPRLRKSEFGLWFTHKAAHAFEGAQETTQARLQIEA
IDRLLDESDDPQDRLRLLHAVREATRTLAYLVDALFEKANHLDSGRDTLTYLLNRKFLHVVMSKEVSYARKTDSPLSVLM
VDIDYFKTVNDEYGHDAGDVVLQQVAALVSTYSRGGDYTFRLGGEEFLVVLVDADSTQAQHVAENLRQRLQDKALLLPDG
SQKRVTMSVGVATHDGHPDYQRLLKRADDALYAAKARGRNTCVLAD
>AHV94212.1 putative transmembrane protein [Bordetella holmesii ATCC 51541]
MTPSQGWSRLILAAACSGMPVAAALAQTLLPATEERDPYEEPVAAQQQPTPPWRALELGRPEQRYPFPVYASKNLKRDDL
RGVRRLVIVVHGIKRDATRSYEAVSALMGNNPERLDDTLIIAPKFSSAIDTGFGHMPAWRRASWEDGELSMQVKGRPAPV
SSMQVLDDLLHELASAERLPALRTVVLPGHSAGAQLIQRYAVLNNVDDDLRNKGLDVRYVVANPSSYLYLTAERPRADGR
GFAPYERGICPTYNQYKYGLDQLPGYLRTGDPARLAPRYAARNVTYLLGSADNNPEHQFLDKTCGAEAQGATRWARGLGH
WRYEVAIAQRHAEWPALAHQAQEVVGTGHNVAAMFGSTCGARALLGETSAPLTQGAACLPITR
>AHV94213.1 lipopolysaccharide kinase family protein [Bordetella holmesii ATCC 51541]
MPADSLAYPRKAFRGGAMLYEAARLVPDPALLDPASYGDDAHAVQEGGRQAAWFVHGPGWQGVLRGYRRGGLIARVSRQR
YIWAGEEQTRCFREFRLLARMQAAGLPVPAPLAAAYWRDGLTYRAAILVERLPNVRPLAADPSAQACEAAGRAIAAMHAA
GVWHADLNAFNILLDPAGRAWLIDFDRGRDGGISTAQRQANLQRLQRSLLKVCGAAGQQAWEAICLAYRASGS
>AHV94214.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MLVVAPCPRGHVRHARAGIDAGGAFGAGWVAPHNPFDLVSVELLDALLPPAWDGNGQGKYLLGTDSQGRDLYSAILYGTR
VSLLIGVASVALSMLIGVVLGLISGYAGGRIDAFIMRVADVQLSFPAILIALLIDGVARAVVPRDMHEIIAFPVLVGAIA
LAGWPQYARTVRGSTLVEKNREYVQAARVIGVPSLVIMFRHVLPNVTGPVLVLATVHLATAIITEATLSFLGVGVPPTAP
SLGTLIRIGNDFLFSGEWWITIFPGAALVLLVLSVNLVGDWLRDALNPRLN
>AHV94215.1 NUDIX domain protein [Bordetella holmesii ATCC 51541]
MSDNIIDVAAGLILRPDGQLLLGQRPEGKPWAGWWELPGGKLEPGETVLQALARELQEELGITVTDSRRWVCYIHAYPHT
TVRLAFCFVTGWTGEPRGLENQRLAWVDPRHAAQVGELLPATLPPLRWLRLPQTYAISAVGSPEAMPTFTQRLERALANG
LKLLQWREPAWPGGPAASRAGFETALDLCRRAGAQLLVNSVHPQDWWQQAHGVHLRASDAAALHSRPLLPEGSLVGVSAH
NHAEIVHARELGADFAVLGPVADTLSHPGQTPLGWAGFEAANRDAGLPVFALGGQSLATLDQAQAHGAHGVAGIRGLLG
>AHV94216.1 AAA domain protein [Bordetella holmesii ATCC 51541]
MPLPKMPTRPAAILSFPTGESATAHATRDDDEDVAPVQPELDGMKPAAVLVPQAKAPVQAPAQKPVAAKPARAPKPAAKP
AAKRGGKAAAGEPSKLFVLDTNVLLHDPSSLFRFEEHDIFLPMMTLEELDHQKKGMSEVARNARQVSRSLDALVQDTTQL
DEGIILNKLGNKDATGRLLLQTTAIHSTLPSDLPMGKADNQILGVVRALAEKYPQREVVLVSKDINMRLKARALGLAAED
YYNDHVLEDSDLLYSGVMPLPDDFWNRHGKDVESWQQGGTTFYRIRGPLCSQFVVNQFVYFEGQMPLYAQVREVSGKTAV
LATLRDYTHGKNNVWGITARNREQNFALNLLMNPECDFVSLLGQAGTGKTLLALAAGITQVLETKRYTEIIMTRVTVPVG
EDIGFLPGTEEEKMLPWMGALEDNLDVLNMGDGEGGADWGRAATMDLIRSRIKVKSLNFMRGRTFLNKYLIIDEAQNLTP
KQMKTLVTRAGPGTKVVCLGNVAQIDTPYLTEGSSGLTFVVDRFKGWPHSGHVTLQRGERSRLADYAGDVL
>AHV94217.1 lysE type translocator family protein [Bordetella holmesii ATCC 51541]
MTNPKPILFFAALFPQFVVPGEPLAPQFCMLTGIFMVMSLCSLHIYAAVARQARTALSRPRVVRWVDRLMGGIFVCFGTG
LLALRRIAP
>AHV94218.1 endoribonuclease L-PSP family protein [Bordetella holmesii ATCC 51541]
MKILQPPDWLAPRGYSNGMMTEMTVGSRLLFVGGQIGWNGQQQFETDDFALQVRQTLENIVAILQEGGAGQQHIVRMTWY
VKNKAEYVAAYPEIGKHYREVIGRYFPAMTAVEVADLVEDRAKVEIEVTAVVQG
>AHV94219.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MGTRLPSPVRQDDDSLVGQGSYVKNHFRYYNTGLKYQINNDWSVSTNYSYSTTETRRNEVVLALLDSAGNYDDQRSDYGE
AYGYNQWRGMIEGKFETGALKHQLVAGASWQKQKNDYSSTYFYGSVGTGNLYQTNHNAYYSNGNMSLYRAAEITQKAVFA
SDTIDLTHGWSLLGGLRVTDYSQKGFGVNGARNSEYDKNGVLTPTVALMYNITPRTMAYASYIESLEAGSVVGNNHTNAG
TLLDPLKSKQYELGLKTEQDDWAATAALFRIERKTENPVVDPNTGRARLEQNGLSRYQGLELAASTRLAKLWTLGGSLMF
LDSEYRKGTTYNGNRVAGAPRFVAAAQLAYSVPQLPGLKLRADVRFTGSSELRQANDIQLDNYTLVNIGATYDTRIAGYE
TTFRAGINNLANKRYWLYQTAEYIKPGDPRTYSLSATVKF
>AHV94220.1 LD-carboxypeptidase family protein [Bordetella holmesii ATCC 51541]
MPALKPGAVVAVIAPASAVDGAADAAAAWLQARGYQPRLMLGARMDAPYDYLAGSDSLRLDQLHAAFSSAEVGAVWCLQG
GFGSWRLLDQIDYALIGANPKPFIGYSDITALHLALQQRVGFVTFHGPMLGQDFIVGRAEPTESLAWAMLSGQVGAGSWI
EAPPGSQVVALAPGQASGRLVGGNLALISALMGTDNEIDTRGAILFIEDVNELPPRVDRMLSQLAAAGKLDSVAGVLVGN
FTRGSPGSDPAGQSLYWPILRETLQGRGVPVLAGWPSGHWNPNLMLPLGARVTLDAQRRALRLDQVIVENRAT
>AHV94221.1 hlyD secretion family protein [Bordetella holmesii ATCC 51541]
MRAAFANEQEALFPYQFVNICLTLQQRDPSLSIPSAAVQYGAQGPYAYVIDHEDKAQRRPLQIGLNTAGRASVLDGLSDG
DRVVIEGVDRLNEGRLANVLATQEAS
>AHV94222.1 metallo-beta-lactamase superfamily protein [Bordetella holmesii ATCC 51541]
MSKQFASHADLEDKVVSFEKLSDNAYAYTAEGDPNTGVIIGDEAVMVIDTQATPVMAQDVIRRIREVTDKPIKYVLLSHY
HAVRVFGASAYQAQEILASRDTWDLIAEHGEQDKASEIRRFPRLFRNAESIPPGLVWPTMTFQGEMTVNLGNLEVKLLQV
DRGHTKGDTIAWLPEQKILFAGDLVEYQSTPYCGDAYFRDWPTTLDTLAGFAAEKMVPGRGPALKDAEEVRRGLAGTRAF
LTDLYGAVNRGVAEGKDLKTIYREVYDFMKPRYSDWVIFDHCMPFDVSRAYDEAQGIVDPRIWTDKRDIEMWKQLEG
>AHV94223.1 hypothetical protein D560_0061 [Bordetella holmesii ATCC 51541]
MQESRPPLPPFSHESAVLKVRAAEDAWNGRDPVKVSLAYTPDTHWRNRAEFIEGRAAVIAFLRRKWARELDYRLIKELWA
HDRNHIAVRFAYEWHDDSGNWFRAYGNENWEFNDQGLMRYRHASINDMPLREDDRLFRWPLGRRPEDHPGLSELGL
>AHV94224.1 biopolymer transport ExbD/TolR family protein [Bordetella holmesii ATCC 51541]
MAFGSFDNKGSGGHTVSEINMVPLIDVMLVLLVIFIITAPLLAHSIKINMPQVSAEQLQEDPKTIDLAIDASGKIFWDEQ
PITLEDLPFRFHAVAGDKPQPEIRIRADQNTRYETLAKVMASARRSGMGRIGFVTTPAPAAPAIGAQGGDQPAAAGAQPA
AKPAAQPAR
>AHV94225.1 integral membrane, YjbE family protein [Bordetella holmesii ATCC 51541]
MELSSAAFWIALLQIIWVNILLSGDNAVVIALAARSLPPHQQKKAITVGSAAAIIMRILLTLVAAKLLMLPWLKLIGAVL
LVYIGVTLLLPEGEDEGDGKQNGGLFAAIRTIMIADLVMSLDNVVAVAAAAMGDTTLLVLGLAISIPLVIFGSTLLLKVI
ERFPLIVWVGAALLGFIAGELLVGDPALQDSIQRVDTMLGVTQHQFALLSGAIGALLVLAIGKFLSNRQKAD
>AHV94226.1 hypothetical protein D560_3524 [Bordetella holmesii ATCC 51541]
MPNPSASPPLNHTELLRDTQQIMDILKEVIHPGNAAQARDGQGRSWPIKLLGTDWQAGLIFWRPHDPQQATVMPGGAPFM
SGSLTVEILISVGDGSHLQFEAGRPTILNFSDASVGMVSEFPALLRRETPLDRPA
>AHV94227.1 hypothetical protein D560_0208 [Bordetella holmesii ATCC 51541]
MLRAQRTTGPTPRPRAQGERYMDLVYLAVFAAMAALTGTQLRLCARLFARGRP
>AHV94228.1 hypothetical protein D560_0589 [Bordetella holmesii ATCC 51541]
MPDSTVEKARARPGIFSASRHLTCSMRDPNPLAVASNPRGLNP
>AHV94229.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQARGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV94230.1 hypothetical protein D560_3397 [Bordetella holmesii ATCC 51541]
MDKAARSGQRPSMMIQLVTGMGWSMPQCQCLPPQGTSR
>AHV94231.1 GMC oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MARKNLTVRTHAQATQVLFEGNRAVGVAYCDPRNPAATRSVRANREVIVASGAINTPKLLQLSGLGPADFLREMRIPVVR
DLPGVGENLSDHYSVRVVARVKQSQTMNELVKGLNLVGQVSRWLLKRSSIMALSPSLLHYFWKSLPELDAPDLQGVFTPA
SYKEGYVGVLDDFPGMTAGVWQHRPQSRGQVRVRSNDPMQDPLIRANYLSHPDDQITLVRGIRLARSLLQSQALAPYFDG
EALPGPMCQSDTELLDFARRYGVSSYHVNGTARMGPTGDRLAVVDPQLRVHGVQNLRVVDSSVMPAMPSANICAATMMIG
NKAADLIKQS
>AHV94232.1 glutamate/Leucine/Phenylalanine/Valine dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSQPLVHALPSYLDANHLGPWGVYLQQVDRVTPYLGSLARWVETLKRPKRALVVDVPIELDNGQIAHFEGYRVQHNTSRG
PGKGGVRFHQDVTLSEVMALAAWMSIKNAAVNLPYGGAKGGVRLDPRNMSQAELERVTRRYTTEIGVIIGPSKDIPAPDV
NTNAQTMAWMMDTYSMNEGATATGVVTGKPIALGGSLGRVEATGRGVFVVACEAARDRNVPVAGAKVAVQGFGNVGGTAA
RLFHEAGAQVIAAQDHTGTVHNGAGLDVHKLLAHVAATGGVADFSGGQALDNAEFWTLETDFLIPAALESQITEANAAKV
RAKIVVEGANGPTTPQADDILRENGVYVVPDVLANAGGVTVSYFEWVQDFSSFFWSEEEINQRLERIMREAYTSIAQVAR
EHNVTLRTAAFIVACTRILQARQVRGLYP
>AHV94233.1 gamma-glutamyltranspeptidase family protein [Bordetella holmesii ATCC 51541]
MSMPFDWTFPYASRKMPVLAANTVATSQPLAAQAGLRMMLAGGNAVDSAIATAIALTVVEPVMNGIGGDMFTLVWHEGRL
YGLNSSGRSPAAWTPEYFAGRDTMPPSGWGTVTVPGQVAGWKALHERFGKLPFAQLFEPAIEYAERGFAVSPTIARQWAT
QAPKLAHEPGFAQAFLPEGKTPQAGQWWRFPEQGRTLRDIAETGGESFYRGALAAKIAAFARETGGALTADDLAAHQPQW
VEPISQGFRDYRLHEIPPNGQGISALIALGLLEHFDLEGMGCDSADYYHVSIEAMKLAFADLHHHVADPEHMRMDAAALL
DPAYLSERARLIRMDKAVTPLAGAPKTGGTVYLTAADAQGTMVSFIQSNYHGFGSGVVCRAQASACITAA
>AHV94234.1 RNA 2'-O ribose methyltransferase substrate binding family protein [Bordetella holmesii ATCC 51541]
MASTQVLAGFHAVVARLRHAPESIKEIYVEASRRDKRMQTLIEQAERAGCRVHPVPAERLDGLARGTRHQGVLALADERP
LAVGVGEVLDEIDGPAFLLILDGVTDPHNLGACLRTADAAGVHAVIAPRDRAVGLNATVQRVACGAADTVPYIMVTNLAR
TMRELKERGVWLVGTDDQASHDMHAVDARQPMAWVMGAEGEGIRRLTRETCDELVSIPMLGSVESLNVSVASAVCLYETV
RQRRN
>AHV94235.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MMLVMSAVVFAGIYMVGDPVSMLASPEATEAQRGAIRAALGLDQPLWRQYLIFIGQAVQGNFGNSFLTGEPAMRLILQRM
PATMELAVVAMTLSVVIGVPLGILAGLRPRSLGARAIMTGSVLGFSLPNFWVGLMLIMVFAVSLGWLPASGRGATVSVAG
IPLSVLTLNGWMAIILPASTIALAKCALIVRVTRAATRESLPQDYIKFARAKGLSEKRVLGVHLLKNILIPIVTIAGLEL
GQVVAFAVVTETVFSWPGMGKLLIDSIITLDRPVVVAYLMLIVFFLVMLNLVVDIIYTVLDPRVRLEARR
>AHV94236.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MDLKQIEYFVNVAERRSFSRAAEALDVAQPTLSRQVRLLELELEQHLLYRNGRGVEPTEAGLRFLGHARGLLALAARARE
DLRGLRASPSGKVVVGLPPRIARVLTPPLVATFRQTFPDAAITVAEGLSAQMREWLLSGRVDLALLYDPPATPQLATELL
LREELVLVAPRQRQPPLPAHIPLAALTDIPLILPSSPNAIHTLVEGVCRRHGVRLNVVTEVDAVQTIVELASQGQACAIL
PRSAALDDRALAVCHIESHPLRNQLVLATPRQRPATRLAEATARLMRSMDVQALLYRQPA
>AHV94237.1 NMT1-like family protein [Bordetella holmesii ATCC 51541]
MKFKQWLALPLAAALLAAPAMAAEKFRVGYLRVMDDAQAIVAQEGGFYQKAGLDTELIEFKSGTDLIKAIVGGQLDIGVL
GFTNAVAWASKGADLKVVGGAQQGYHSLLVRDDSGIKDIAGLKGKTLASQAEGSTADVVLKGVVLKEGKLADGDVNVMGV
SPAVAVQSLVGKRVDAAFLFEPYDRIAQLIAPVKQIYEVGQSWPFPCMVVITSGDVLAKRKDDVWKALDAQKSAIDLLQK
KPDEASKLIASYFIAEPTLKTLSRGELPRETVISEAIRTQVFTPALTAKDTKRMQEIADILQAQGSLKTRDGKPYDVSSI
VDLSWQEARKL
>AHV94238.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKPSFKAAMALTLAGLAFGAQAADWPDHPITFVAPFSAGGANDLVARIVAKAVATELKANVIVENRPGAGGVVGSAHVAR
SAPDGYTYLVGSNGTVTNSLIRSDQPYKDEELTPVALLSITPSVIVTNPDNPAKDLKEFVANARAKKTDRITFSTAGNGS
TPHFVAVMMKQATGLPVEPISYKSGSEGVTAVVGKQVDATSEASIVTLPLVKSGKLKALATTLDKRMASAPDIPTTKEAG
FPTIQIGHWAGLYAPTGTPADVMDKMNAAVNRALKTQDVQDALKLSSIEPGGGSRAEFTDFATSERARLTDVVKQGHMRG
D
>AHV94239.1 cystathionine beta-lyase [Bordetella holmesii ATCC 51541]
MSSSEHIDTLLQRLGTAPFDPQTGAAPVNLPSMRASTVRFASLEALENAQQRKAAGERAVAYGRMGMETHAALEQVFCQL
EQGTHCYLASSGLGGITLAFMALLSAGDHALVADCVYGPVHELNAAVLSRLGIDVTFYHAGDDLEALVKPNTRLLYVEAP
GSLLFEMLDMPALASFARRHNLVLAADNTWGSGYIYRPLALGAQVSVIAGTKYVGGHSDLMLGAVITNDEAIAKRLNRTQ
YAMGYSVSADDAWLALRGVRTMPVRMAQHARHALEVCEFLQSRPEVAAIYHPAWPGDAGHALWKRDCSGSNGMLAVQLRL
SVHAARTFVDALNLFSIGYSWGGFESLVQLVTPGELAPHHYWKGGQDALVRLHIGLESPADLIADLTQALQRAAGR
>AHV94240.1 K+-transporting ATPase, C subunit [Bordetella holmesii ATCC 51541]
MHPPLPPAGRPLRAALVIFLALSVLVGLLYPLATTGVVRLLWPFQAGGSLLEQDGRVVGSALIGQSFTDPRYFWGRPSAT
APMPYNAAASGGSNLGPANPALAQAVRARIAALRAADPGNPAPIPVDLATASGSGLDPHISPAAAGYQAARVARARGLPT
ATVEQLIARHTERPVPDILGEPVVNVLALNLALDRLR
>AHV94241.1 hypothetical protein D560_2490 [Bordetella holmesii ATCC 51541]
MRYLVWALRLLVFIAVLMFALKNTDPVAVKFYADYVVQDVPLIVVMLVTFVLGAVFGLLLTVPASMRRRREAQRLRRELE
RLQAATLGQQPAVAPEAVAPMSPL
>AHV94242.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MNIAPKHMPTVLTTIRTVLAAMPFPAMGAGTFSIFFY
>AHV94243.1 ribosomal protein S2 [Bordetella holmesii ATCC 51541]
MSLMREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVGKFQEATKFVKQIAARGGNVLFVGTKRAARELVAA
EAQRCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEVMVADGSVERLTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALF
VIDVGYHKIAVAEARTLGIPVVAVVDTNHSPDGVDYIIPGNDDSARAIELYAKGMADAVLEGREQNLNGLVEEIAEGQEE
FVEVQEGQA
>AHV94244.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLAIEDMAISYGPMRALRGVSMHIGQGEIVALLGANGAGKSSLLRGIMGLMPAAGALRFEGRDLCGLSTPERVMAGLAMA
PEGRQVFTDQTVHENLLLGGYLIRHDRPRLARQIEGYFEMFPRLRERREQVAGTLSGGEQQMLAIARALMSNPCLLILDE
PSLGLAPLVTADIFRGLKRLRDAGMTILLVEQMANQALAIADPAYVLEGGTMTLQGLAADLRRDPRIREAYLGGEFAPEA
VH
>AHV94245.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MRRLDLRRLILGLSILSLLLAMAGALYASSVVQREILVGSSLEDNRAFAQKLARSADIFLRESLTELAYSARLIGREGGT
EQSVQREVERLKNQSGNFNATAFVNADGVIAGITPAEPGVAGRQVSTNAMEQALASRLPRISEPFLSPGGRWIVAISQPV
FLPDGRFGGFIMGLLYLHERNALGEILGEQTHRNGAYQYVVDQRGILLFHPNLRSVGQIVDQNAAVHELMLGQEGAQRIV
NTEGVDMLSGYALLRETGWGVVAQRPTDGVLSRTQVLLLRTIQTSLPWLCLSLLCVWWLANRIARPLAQLAGAAADLDKP
RVADRLAGVGAWYREAEQLKTALGAVSRKIGTKFNQLRQDSLTDALTGLLNRRGLDEILQSEPRYGRAMAVLAVDIDHFK
SINDGLGHAAGDAVIRGIAALLRSRARASDMLGRLGGEEFVVILPNTDRPQALQAAERIRAAVETFQAVPGGACTVSVGV
AVYPHEGASLTEVLARADDALYEAKRGGRNRVCDAASM
>AHV94246.1 hypothetical protein D560_0545 [Bordetella holmesii ATCC 51541]
MFLLPFLLPPYIAALSWTMALQQRGYLVQLSGVDLSGLLH
>AHV94247.1 ribosomal S8 family protein [Bordetella holmesii ATCC 51541]
MSMSDPIADMLTRIRNAQQVDKTTVNMPSSKLKVAIATVLKDEGYIDGFEIKGSQAKPELEISLKYYAGRPVIERIERVS
RPGLRIYKGRSNIPQVMNGLGVAIVSTSRGVMTDRKARANGVGGEVLCYVA
>AHV94248.1 sulfate adenylyltransferase, small subunit [Bordetella holmesii ATCC 51541]
MSLVAQRSHLDWLESEAIFILREVAAECAKPVLLFSGGKDSVVLLRLAEKAFRPGRFPFPLMHIDTGHNFEEVIAFRDER
AGQLGEQLIVRRVEDSIARGSVVLRRETDSRNAAQAVTLLEAIEELGFDACIGGARRDEEKARAKERIFSFRDEFGQWDP
KAQRPELWNLFNTRVHPGENMRVFPISNWTELDVWQYIHRENLALPSIYYSHRREVVRRRGLLVPVTRLTQPAEGESIET
LDVRFRTVGDISCTCPVASEAADPLAIIAETAVTDITERGATRMDDQTSEASMERRKREGYF
>AHV94249.1 hypothetical protein D560_2599 [Bordetella holmesii ATCC 51541]
MTQTPLHHQAPAGLQAWLDGPEAAAVKSVKEVVIDGERCVIKRREAGLGRGLSYVLRYLRALLLAVGCKLALGEFPRPSV
LLRNGLAYEAERLRHLLLAGCRVPAVWWQQPGLVVLEHVGDDLPFFLRRAEYDERLGLVRMLAADLAAFHMRGFWHGGAQ
VRNVTLREDGQLWRIDFEENIGAALSLPMAQAYDLFQTLSSVVSLSKIPREQVPIIGKLILETYFEANPDPAVRAALKRL
ARVVCGLAGILKPLAGKLPWRDVRTFFQVSDTLRSVLQ
>AHV94250.1 asnC family protein [Bordetella holmesii ATCC 51541]
MTLLNARKLGLKVNVFIQISLDKQRKEALDVFEREIAVLPEIMECYLMSGDADYLVRALVEDVDALEQLIVERITRIPGV
ASIRSSFALKQVLYTTAVPLR
>AHV94251.1 periplasmic binding family protein [Bordetella holmesii ATCC 51541]
MKRLFGAVLGACLSLSAQAADRVVTLGGSVTEIVYALGKGDRLVGDDLSSLYPEAATRLPRVGYYRSVPIEGVLALKPDL
VLASEQSGPPEALKRLSEVGVKVVHVSDEPSVQSLEKRIDQVAQALHAGPEGERLLAQVRQNLAAAQALPASGKRVVLLL
NRTGTPQAAGGGTAADMVLRMAGLENVMATQQGYKPLSAEGIGALAPQVIIVTEASAAASGGLSKLAQQPGLSGTPAARN
QCIIAMDDLLALSTGPRLGQAISFLKQQPCIQHGTGH
>AHV94252.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MRESDATLVTQLADDLARRIDEQGMRPGTRLPSIRSMAQQAGVSRFTVVEAYDRLVARGVVQSRRGVGFFVRARNTGALS
PEVSPAPGLAVPARVDVTWLLRSMFRDTTPGSPGGAGLLPADWLDPEMVAGAIRAVGRSARANLVSYGRQQGFLPLRQQI
ASMLQGEGVPAHPEHHLLTTNGVTHGLDLIARHLVKPGDTVLVEDSAWFVFFGRLAAFGARVIGVPRGPDGPDLAMLELL
AAEHKPKLFIINAAVHNPTGHMLSAGAAYGVLRLAERHDFMVVEDDTYGELHPGGAVRLAALDRLNRVILVGGFSKMLAA
SLRVGYVAAHAEILQPLADLKMLAGLTTPELGERVVHRILVDGQYRRHLDRVRVRVDQARRDCLRRLQVLGFAVPHEPGA
GMFVWADCGRDSEALARQAADRGMLLAPGTLFSPSQQPSTMLRFSVAMIDAPEAWRILSDLMAEPGNRPGATIL
>AHV94253.1 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bordetella holmesii ATCC 51541]
MSFIALVPARAASTRLPDKPLADIGGKPMVVRVAERAALSGAAQVCVATDDARVERVVNDHGFRAVMTRADHPTGTDRLA
EAVSLLGLSDDAIVVNVQGDEPLIEPGLIDAVARRLAATPGADIATCACPLADAQALFNPNVVKVVCDTQDRALYFSRAP
IPWARDALADGQRVMASGLPALHHIGLYAYRVGFLHRYPTLPQGQLERFESLEQLRAMEYGHSIVVYRSETAPAAGVDTP
ADLERVRAIYARGF
>AHV94254.1 uracil-xanthine permease family protein [Bordetella holmesii ATCC 51541]
MSDSYFPRWRLADDTVPGVLIAPDERLSWPKNIAMGAQHVVAMFGSTVLAPLLMGFDPNVAILMSGIGTLIFFLFVGGRV
PSYLGSSFAFIGGVIAVTGYAGSGPNPNIGVALGAIIACGLAYTLIGLVVWVANARGGAGANWVEALMPPVVTGAVVAVI
GLNLAPIAAKGAMGSSGFDTAMAIVTIVCVGGIAVFTRGMVQRLLILVGLILSCVIYAVLANGMGLGKAIDFSGVAAAAW
LGLPHFAAPVFTAEAMGLIVPVAIILVAENLGHLKAVSAMTGRDMDRYLGRAFVGDGVATMVSAAVGGTGVTTYAENIGV
MAVTRIYSTLVFVLAAVIAIVLGFSPKFGALIQTIPGPVLGGMSVVVFGLIAIAGARIWVVNQVDFSDNRNLIVAAVTLV
LGAGDFTVKLGNFTLGGIGTATFGAIILYAILGRARRR
>AHV94255.1 sulfate transporter family protein [Bordetella holmesii ATCC 51541]
MGSWVLDITPAVLRSDAMAGLLGALLVLPQGMAFALLAGLPPQYGLYSAVVPCVIAGLFGSSRHVLSGPTNANSLALLAV
LAPMAVPGSPGYIELALAVTVLVGLMQLAVSLLRLGVLANFISPAALFGFTSGAAILIALHALKDAFGVPREAAHGLSET
FSALFAGRISAGAIVVTVVTLVSALAVRRWDRRRPHMLVGLAAGTLAGWLMDMLGAGLAVLGPIAQPLPPLHIPDVEWRR
LPDMLGVAVPLTIVALAQSISIAKAVAQRSGQVIDPNREFFGQGLSNAVGGLFSCYLSCGSLNRSLPNYEAGARTPMAAV
FSALILVGLVLLSVPLLAHIPYAAIAALLLLVAWTLLDVSRWYWLAKVDRNEAMIAAATMAATLFIRMEVAIMLGALLSL
SAYLYRTSRPAMRIMGIDAQDAARHFVVRDSSAPVLPPCPQLCLLRMEGSVYFGAAAYVDERLGALRQGGRPICWL
>AHV94256.1 mmoB/DmpM family protein [Bordetella holmesii ATCC 51541]
MKNPVGPVLRVSDETDKIVAAIEDDNPDREIEIIDRGAYLRVQAEDRLVLTESSLQNYLGSDYRIRSLEAVLSSFFGRVA
TESDSITWYSGAAARTNGDARQGDKQ
>AHV94257.1 malic enzyme, NAD binding domain protein [Bordetella holmesii ATCC 51541]
MPQHPNDRQAALDYHEFPVPGKIAITASKPLVTQRDLGLTYTPGVAAACEEIVDDPVNAFRYTARGNLVGVISNGTAVLG
LGNIGALASKPVMEGKAVLFKKFAGLDVFDIEINETDPDKLVDIIAGLEPTFGGINLEDIKAPECFTVERKLRERMKIPV
FHDDQHGTAITVSAAFINGLRVVGKDIAKVKVVSSGAGAAALACLSLMVDLGLPIENVWVTDIEGVVYEGRTALMDSDKA
RFAQKTDTRKLAEVIADADVFLGLSAGGVLKPEMVATMAARPLILALANPTPEILPEEAHAVRDDIVMATGRSDYPNQVN
NVLCFPYIFRGALDVGATTITPAMERAAVYAIAGLAQEEANDVVAAAYGTYDLSFGPDYLIPKPFDPRLIVRIAPAVARA
AMEDGVATRPIADLDAYVEQLQQFVYHSGAFMKPLFAIAKQVVRDQGRARIVFTEGEDERVLRAVQVIVDEKLAKPILVG
RPSVLLSRIEKFGLRLRLGEDVEVTNPEYDERFHQYWTTYWELMNRRGISKEMARVEMRRRMTLIGAMMVRLGDADGMVC
GAVGAYHDHLRFVDEVLGMRPGPRPMRP
>AHV94258.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MPLLNLPERHAMPAPDASLERFFRSGLKLGHLRMLVSLAELHQVTRVAAAFHVTQPAISKQIAEIEEALGAAVTRRAGNA
VELTSIGQVLVERGREILRQLELAQRDVSALSAGTAGHVRLGAVVTIPQPVIEHAVELFTRRAPTATLSFVESTLDRLLK
MMDEGNLDLALGRNRVAGTIPEMRQESLHHEPFVFVVGSHHPLGGSDTVVRTQDLQDARWITPMRASPAYATMMQALAEH
GVTLGQPAIESSSLALNLSLLRRGDYISILPLSLAKRYVQRGSMRVLPLEPLAPLGEAILYWRADTITPAVALFAACLRE
SSNERITPS
>AHV94259.1 snoaL-like domain protein [Bordetella holmesii ATCC 51541]
MSQPEHVSIDTLDAIMAAFNSHDLDAIMEFFADDSIWEASAGPEPWGKRLVGKAAIRAGFAAGYALLPDAHYKPEGHWVS
GDKAVSEWALTGTLADGAKLCVRGCDLWEFSGQKIVRKNSYRKGVTPRD
>AHV94260.1 DNA-directed RNA polymerase, beta subunit [Bordetella holmesii ATCC 51541]
MPYSYTEKKRIRKSFAKREDVQNVPFLLATQLQSYLTFLQAETATADRVNEGLQAAFSSIFPIVSHNGMARLEFVSYVLG
EPVFDVKECQQRGLTFASPLRAKVRLVLLDREVSKPTIKEVKEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVF
FEHDRGKTHSSGKLLFSARVIPYRGSWLDFEFDPKDVLFFRVDRRRKMPVTILLKAIGMSPESILAHFFDFDNFELKSEG
AMMEFVPERWKGEMARFDISDRSGKVIVEKDKRINAKHLRDLANAGIQRISVPEDFLFGRVLAKNVVDADTGEVIAHAND
EITESVLAAMRDAKVLDLQALYTNDLDRGPYISQTLRTDETADQTAARVAIYRMMRPGEPPTEEAVEAVFQRLFYSEESY
DLSRVGRMKVNSRLGRGDDANGPMTLTNEDILETIKVLVELRNGRGQIDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAETENLMPHDLINSKPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTH
YGRVCPIETPEGPNIGLINSMALYARLNEYGFLETPYRKIIDGKVSDQIDYLSAIEESHYVIAQANAALDAEGHFVDDLV
ACREAGETMLTSPVNVHYMDVAPSQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPLVGTGVERTVAVDSGT
TVQALRGGLVDHVDAERVVIRVNDEENVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKRGDRVSKGDVLADGASTDLGEL
ALGQNMLIAFMPWNGYNFEDSILISERVVADDRYTSVHIEELTVVARDTKLGPEEITRDISNLAETQLNRLDDSGIVYIG
AEVSADDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMTGTVIDVQVFTREGIVRDKRAQSIIDDELR
RYRQDLNDQLRIVENDQFDRIEKLLVGKAVNGGPRKLAKGATVTKAYLADLDRWQWFDIRLADEPHAVVLEQAKESLEQK
RHQFDLAFEEKRKKLTQGDELPPGVLKMIKVYLAVKRRLQPGDKMAGRHGNKGVVSRITPVEDMPHMADGTTADIVLNPL
GVPSRMNVGQVLEVHLGWAAKGVGQRIADLLRDERTAQIKNIRSYLEKVYNTTGTGARFNELSDDDVIELAHNLKKGVPF
ATPVFDGATEEEIAMMLELAYPDEVAKRMQLTPSRAQAWLFDGRTGEKFERPVTIGYMHYLKLHHLVDDKMHARSTGPYS
LVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDITGRTKVYENIVKGDHVIDAGMPESFNVLVKEIRS
LALDMDLERN
>AHV94261.1 ATP-dependent metallopeptidase HflB family protein [Bordetella holmesii ATCC 51541]
MNNSFSKVAVWMVIALVLFTVFKQFDGRAQSQDGVSYTQFMDDAKAGRIRKVDVQGDVLYVTPDTGRAYTLTSPGDLWMV
SDLLKYGVQVSGKAREEPSLLMSIFVSWFPMLLLIGVWVFFMRQMQGGGRGGAFSFGKSRARMLDENTNQVTFADVAGCD
EAKEDVQELVDFLRDPSKFQKLGGRIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFE
NAKKHAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQMLVEMDGFESGQGVIVIAATNRPDVLDPALLRPGRFDRQVV
VPLPDIRGREQILKVHMRKVPLSPNVDATILARGTPGFSGADLANLVNEAALFAARRNGRTVDMSDFEKAKDKIIMGAER
RSIVMPEEERRNTAYHESGHAIVARMLPKTDPVHKVTIIPRGRALGVTMQLPETDRYSMDKGRLLNTIAVLFGGRIAEEL
FMDQMTTGASNDFERATAIARDIVTRYGMTDELGPMVYADNEGEVFLGRSVTKTTHVSEATMQKVDNEIRRIIDEQYGIA
RKILEDNRDKVEVMTRALLDWETIDADQINDIIEGRPPRPPKPPQGPSDSQDTPPSGVATGGNTAAAV
>AHV94262.1 DNA repair protein RadA [Bordetella holmesii ATCC 51541]
MAKTRTVYVCAECGGTTLKWQGKCPHCSAWNTLEETVESATPAANHRYAPLASASPVRSLADIEARETPRQPTGLDEFDR
VLGGGLVEGAVVLIGGDPGIGKSTLLLQALAALSASVAVLYVTGEESAEQVALRARRLGLQTGQVNLLAEIRLEAIQAAV
SQQKPAVAVIDSIQTLYSGELTAAPGSVSQVRECAAQLTLLAKQTGIAIVMIGHVTKDGALAGPRVLEHIVDTVLYFEGD
THSSFRLVRAFKNRFGAVNELGVFAMTDRGLRGVANPSALFLSQHQEQVAGSCVMATQEGTRPMLVEIQALVDSSHAPNP
KRLTVGLESNRLAMLLAVMHRHAGVTTHDQDVFVNAVGGVRITEPAADLPVLLAIMSSLRDRPLPKGLFAFGEIGLAGEI
RPAPRGQERLREAAKLGFSIALIPKANAPRQPVEGLEIWAVDRLQEALDKLR
>AHV94263.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MTRSLVSTSRRALLGGVLALTAGLSLLAPAAAQTDFPNKPLRFIVPYPPGGPLDTMARLLAEKVRDSLGQPVIVENKASA
GGNIGADLVAKAAPDGYTLVMGAVATHAINPFLFANLPYDPVKDFAPITIVASVPNVLVMNVDFAQKNNINNVADLVAYA
KKNPGRLNYGSGGNGSAGHLSGELLKARAGIAAEHIPYQGAAPAQLALLSGQSDFMFDNLAASAPLIKDGKVKALAVTTA
KRSSLLPDVPTVEESGVKGFDLGTWFGVFVPGATPAPVVAKLNKAYTDALNRPEVRQRLLTMGSEQAPMSAEDFAAFVKA
EKDKYGEIVSISGASLN
>AHV94264.1 lrgA family protein [Bordetella holmesii ATCC 51541]
MQIGVIASFAWAGQALAQWGNLPVPGSVLGLTMVLLLLASGVMRVNHIRRGASWLLAEMLLFFVPAVLADVVALVFWPLA
TVMAYVCARAVYRRRGYWWSSTLVMAPALLLALALCLHAGYADYMRGSHWLMAMLSPVIVSFALPLYQERALIRRYWPIL
LVGVTVGSTIAGVSAWLLASWLDLPAEVRMSLVPRSVATPFAMTLSSKLGGVPDLTAVFVIVTGVLGALMGQTLHRWLPL
RSSLARGALFGMGAHGAGAAKARELAAEEGSIAGLVMVLAGLSNVLITPGVAYLLAS
>AHV94265.1 aminodeoxychorismate synthase, component I [Bordetella holmesii ATCC 51541]
MDCWFEDRLAGRSRRLSGQVARIQAAQPQELPAAWAAIEAARRAGHWVALLLDYELGEWLLPQSLRAPADGPNPPARTDL
PPRLTALVFEHAELTGPWTGETGARVAAVRPRQSRADYIDRIERIRAGIAQGEFYQVNYTQPLDVRIEGDPAALYRDIAQ
RHPVAHAAYIRDGRRTVLSFSPELFVARQAERLVTRPMKGTAPRSADPDEDRRLGQRLLASEKDRAENLMIVDLLRNDLG
RLAQTGSVSVDALFSLERYPTVWTLTSTVSAHVPDASLAEVLCALFPCGSITGAPKISAMRRIRQLEVAPRGLYCGSVGW
LAPDGDFSLNVAIRTLVLDDQGQGVYSTGGGIVHDSDPELEWQECQWKARILGRPH
>AHV94266.1 alanine racemase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MTMAIHSEDSAAVRACFRRLRKLRDAVATPQLPMARLSMGMSADFELAIEEGSTEIRIGSTLFGARHYAT
>AHV94267.1 putative membrane domain protein [Bordetella holmesii ATCC 51541]
MIAVGMTGLVWQALQPDMGSNDVLHLWLALDAMRATFLWLPVAVLGAWLATLAFCADRHLTRAQPHFLEPLAWAFVVAVQ
AMVWMAGGVGVD
>AHV94268.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MRIREIAHTRVHYGYRRVHVMLRREGYRDNHKRVYRLYREQGLSLRHKRPKRNKSAQRRQPEAVAQAINDIWSMDFVMDQ
LFDGRRLRALTLVDNYSRECLAIDIGQNLRGGDVVATLGRVCALRGLPRVIKTDNGSEFISKAMDKWAYENGVEIDFSRP
GKPTDNAQCESFNGRFRQEGNPPAKAVRSEVEFSR
>AHV94269.1 hypothetical protein D560_2169 [Bordetella holmesii ATCC 51541]
MVLDVSLAQRHAQGIQAPGCVRVSATRRRAPSRAHQRAAAAPVSPNPRIRTNGASAREVSSVFIAT
>AHV94270.1 hypothetical protein D560_3867 [Bordetella holmesii ATCC 51541]
MFQFAETDPDDIENYTNRSPYPILHLLREESIDRAVEAFPDAAEIYEKNIETMRALGHDGWQRLMDEGSDKGTH
>AHV94271.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>AHV94272.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MSTTTRDQQIGDVLLNMQNISLSFGGVKALTDISFDVREHEVRAIIGPNGAGKSSMLNVINGVYTPQQGSITLRGERFSR
MNPRRAAEMGIARTFQNLALFKGMSVLDNIMAGRNLRMKCGLLSQALRLGPAEREEIEHRKFVENIIDFLEIQAYRKVPV
GRLPYGLQKPVDLGRALAMEPRLLLLDEPMAGMNIGEKQDMSRFILDVNDEFGTTIVLIEHDMGVVMDISDRVVVLDYGK
KIGDGTPEQVRGNPDVIRAYLGVDHGSTDGIRHGILSRNLSGRTDERHDVFAHRPGLCAHLQSIGRLQLRPGRHGPGGCA
IDGAIFRVAAALAGL
>AHV94273.1 inhibitor of apoptosis-promoting Bax1 family protein [Bordetella holmesii ATCC 51541]
MSEYRPSPFNRSGPIAGAPGEVVRKQVLRNTYWLLALSLIPTVLGAAVGLYTGINRVMGASPGMSAIIFLVGAFGLMFAI
EKNKNSSLGVVLLLAFTFFMGVMLSRLLGFVLGLGNGSQLVMMAFGGTAVVFGTMATLATTIKRDLSSMQKWLFTGAVVI
ILAALANIFLQLPALMLTISVLAIVIFSAFMLVDLQRVVNGGETNYVTATLAIYLDVYNVFSNLLMLLGIFGGNRD
>AHV94274.1 hypothetical protein D560_0435 [Bordetella holmesii ATCC 51541]
MTLHVPSHLKGAPCAGPDADERELEDFLRTTDPVAFEAALWLTRQQGGLSAAEQQCFEQWLAADSANARAYADLEPGLEG
LRALAAAARARLPAIASSTAAAPPMRADTPRAGGAAHQPALPGRRAWLFNVARLPQASRLPSLAGIGWTGTGRRGV
>AHV94275.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MIRKLGFVGLGMMGLPMLENLARDDRWEILAFDNAPSPFERLARHPAWGTRLHRAAKLEDLADCHAVITMLPNSPITNSV
VLGSQAQAGLIDILQPGALLIDMGSSNPADTLRLSEALVARSLTLLDAPVSGAVAKAANGSLAIMAGGRAEDLERARPVL
GSMGTTIIPTGKVASAHAMKALNNYVYAAGLLAASEALAIAQRMDLDPTILTEVLNASSGRNVATETKLKQFIIPQTYNG
GFALALMAKDLDTAQSLQTLAGLNARQLSLCANVWKAAQAHLPAGSDNTAIHRYLDQGCPGA
>AHV94276.1 hypothetical protein D560_3126 [Bordetella holmesii ATCC 51541]
MDAPASQGYGLLRIKTPRRQTMNAVRTALAAALLAATTPPLPAPSP
>AHV94277.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94278.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MAGSDPLKTSVTAFRLGITKLIVPFVFVFSPSLLISVKGFTWHDFGVTLVGCMIGLVLLSAAFSRYFLVPMKSWERWLFT
IGALLTIVPGALSGIIGLVLCVPAFLSQWRGWNHQRSAAAPA
>AHV94279.1 phage integrase family protein [Bordetella holmesii ATCC 51541]
MLREGSSPNTRAAYIAAIRYWSGWHTLRMQGPFVLPLPVATVLQFIADHLQHSEQTTLVHDLPEAIDQQLVASGVKRAPG
PLKLSTVRHRLAVLSEAHETQGLPNPCRDRAVRALMKRSRAAYARRGDLPQGKDALTREPLEKLLATCDDSLIGLRDRAM
LLFAWASGGRRRSEVVAATMENTRRTPEGYLYTLAHSKTNQEGRARPDIYKPVAGRAAAALSAWLEKANITEGALFRRVR
RGGIVGEALSAEAIRRMVQARVRLAGLDGDFAAHSLRAGFITEAGRQGLPLAEVMAMSGHASVATVMHYHRAGAAASSKA
AHMLDDD
>AHV94280.1 aminotransferase class I and II family protein [Bordetella holmesii ATCC 51541]
MPGVPDVKEFPHRKFGRIQSALWRNPAPELLTYSYGGGLPALREALAEHLGLTRSVDCDPEQIIITEGSHQAIDLATRML
GASGDIAWIENPGYWGARTVLSANGIRVEPQPVDEEGMLLPAAAEEVGTPPRFIFVTPSH
>AHV94281.1 NADH-quinone oxidoreductase, B subunit [Bordetella holmesii ATCC 51541]
MAIDGILKQGFITTSADKFINWAKTGSMWPMTFGLACCAVEMMHAGAARYDLDQFGIIFRPSPRQSDLMIVAGTLCNKMG
PALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGLLQMQNKIRLTNTIAR
>AHV94282.1 aspartyl/Asparaginyl beta-hydroxylase family protein [Bordetella holmesii ATCC 51541]
MKWLIPGLWLASILFAHFRGRVRLSLSRQFLDHSVILAPINAFMVLCSRVPTTAYLTSREIPELRVLDENWQIIRDEALK
MAELRRIRAADNHDDIGFNSFFKYGWKRFYLKWYDARHPSAEELCPNTVALLKTLPKVKAAMFAELPPGGKLNAHRDPFA
GSLRYHLGLATPNDDRCYIVVDGDSYSWRDGESVVFDETYVHEAHNKSDANRIILFCDVERPLKWGWAEAFNRWFGRKVM
SAASSPNDAGDQTGAINKLTHAHWKLDQKRKQFKAWNKTVYKLTKWGLIILVVLAFLAW
>AHV94283.1 impB/mucB/samB family protein [Bordetella holmesii ATCC 51541]
MALTPAACQAGMEIGMRRASALALAPSADLRLRDPQAETRRLHEAALALLQYTPQLALREPDALLLNVGASLQLFGGPVR
LAHRVRSSLAALGLHGRLGIAPTAQGAWLLAVGAARPPCGYPASHAAWTRCR
>AHV94284.1 thymidylate synthase [Bordetella holmesii ATCC 51541]
MKQYLDLVQSILDQGAWQENRTGVRTLSIPGAMLRFDLQEGFPAVTTKKLAFKSAIGELVGFMRGARNAAEFRALGCKVW
DQNANENSQWLANPYREGPDDLGPVYGVQWRRWPAYKLLPTTRQAQIDDALGRGYARVADVDEGGVPHVLLYKAVDQLRQ
CLDTIQRNPSDRRILFHGWNWAQIEEMALPPCHLLYQFLPNASTGEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT
GYTPRWFTYFIGDAHIYESHLDMLREQLTRAPFESPRLVLSDRIPDFNQTGRYEPEWLERVEPGDFTLEGYHHHAPLTAP
MAV
>AHV94285.1 catechol 1,2-dioxygenase [Bordetella holmesii ATCC 51541]
MSLNLFDSKEVQDLLTAASNVEGGQGTPRFKQIVHRLLGDLFKAIDDLDITPDEVWAGVNYVNQLGRDGEAALLAAGLGL
EKYLDIRMDEEDRRAGLQGGTPRTIEGPLYVAGAPLRAGMSRIDIDPDAAAGPLVIRGVVTDTNGAPLANAVVECWHANS
EGFYSHFDPTGAQTDFNLRGAVQTGPDGKYEFRTLMPVGYGCPPKGATQQLLDALGRHGNRPAHVHFFVSADQHRKLTTQ
FNIEGDPLIWDDFAYATREGLIPPVVEKTGGAALGLKEDSYKEIEFNFALTSLVQGKDNQIVHRLRASAEA
>AHV94286.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MSPILLDPVLAEDGTPLARYRWPSACPRPGATAYILHGLGEYAGRHARLAQWLSARGWRVGAHDHRGHGRSGGPPAALRE
RDDLVRDATAQIAAFAAETGQAPLVIGHSLGALVALRLGLQPDPPVNGLVLSSPPLALRMPGWLLPPLRQIARRWPDAAL
AYPLAPARISHDPAVVQAFRRDPLARRCISGRLASFIDSSQTLVMAAAPSLSLPTLLLVAGDDRVVAAGGSRQFAQRAPA
GLLTLRWYPHAWHEVFNERADYADPVYADLDAWLAGHLNSLEDTGPNSVPKTL
>AHV94287.1 hypothetical protein D560_0123 [Bordetella holmesii ATCC 51541]
MNIQSLVRNGLVLAALSLSAASFAQDALGEADKHFLERAIQGGYAEIAGGKLAAANASTRRVKQFGELMITDHARLTDDL
LALARKKGVQPPEDLSFAQKGKLAVIAAEGGSDFDKAYVDQLAVAAHEDAIKLFQQTESQGKDEDVKAFLAKALPVLQQH
LDMARTLQGQKTQ
>AHV94288.1 hypothetical protein D560_2202 [Bordetella holmesii ATCC 51541]
MVGKGSAYDLYLTRELQYASIARAPTSPAVVESFLAQGADVAAGVRQQLLADARRFGGLRMLDGHFMLIRQAMGLPKSRG
AAAQTYLAYFVEQMKATGFVAAALQRHGIEGAAVAGPGDR
>AHV94289.1 hypothetical protein D560_0438 [Bordetella holmesii ATCC 51541]
MSDDVPALPGARPIAPAPVFAHPGKPRRSGALPMINPRKR
>AHV94290.1 ABC superfamily ATP binding cassette transporter domain protein [Bordetella holmesii ATCC 51541]
MVTIAPGYVDTPMTQHNPYRMPFLMSAEKFARRAIRTIEAGASYRVIPWQMGVVSRLMRLIPNVLYDVLARNAPRKPRAR
R
>AHV94291.1 hypothetical protein D560_3633 [Bordetella holmesii ATCC 51541]
MTVSNVLRLSRSAGTLAGPGDGEQLMTRLEQEHAARVQAEKDLANARTLLRETTQQLAKQRLTLTWKLGEAVIRARNMAD
YLLLPYTLLRLSHTHRREHRHNPAPRKPNAAALPAEAASAIKDALDYVKRVRSPEVLLWCGQQSWPTEVRSKVYCEIARW
ARTSYPDIAEQVAQQLLLIDPAAPHSRQLAFSLFDAGLVTVPARLLQTASASGVRLNTAESQRYARIQAAHDVLTDDTAA
HLPGGYRYDFSAEGPLLILAPHSLLQRRSANENALHRYATSLAAREGEVRVISWQSSDDDTADTDQPSTSELRVDGVLYQ
AVTAAQARTARLQPQALADIVLAQTVGQRPRAVLAWDDAHCGIAAHTAATRLRVPYGFIAHSVSFFQKTASNHVLSERAL
VDLRLLKRALSQADMLALGCTALAAPLQELLQAEPAVCLLPPFLCLPPTCVHRKVISRLQARWHA
>AHV94292.1 fimV domain protein [Bordetella holmesii ATCC 51541]
MSSRHTQHHRFQQSFRKHGLALALAMTLGVTWGGSAQAARLGHARVISAPGEPLRVSVPLVDLSAEEAQSLQVSLADAAA
WEQSGLTPPASLATLHLQTQPVTDRTRRDLLLASPQSLQGEAVDILLDLRTGAGQRLVQVTVLVPKGALRVQSAQLGSVS
PAAQAPQAGSVKVRQGDTLYNIARRNKVSGANLHQMLVALWRTNPDAFIDGNMNRIKAGATLSLPDAQTVRSIDPEEARR
HYVDQVDSYARYRAGLGKAATGARVSSGSASSGVVSRSDMPAGARTESGQDRLRLSGATANSTSDAGGDRSSSDARALAD
ARERVDTLQSNVDALKHAGAGRDSASDGTVGAAGMAAGAAAAALAGARPSANDTAAEDMSASSLVPAGASDKGGAAGLSA
PAALGSTAAEPSPAAGAAGASSVAPKGQGASGIVSPETKNTAAPDGAASKAVAGNDAAKSGLPAWLANNLLVIVTAILAL
LVLAIAWALRRAGARRDEDNEETPYSEAPRLDQEALNKRLDSISLDLDPPPSDEPPPTSRT
>AHV94293.1 putative membrane domain protein [Bordetella holmesii ATCC 51541]
MTYASLVLVVLAAMAHATWNLLAKRAAMVGPVFVFAYGLAASLLYAPWVIWVLAHEGMQWSWPVLVCILASSLLHLGYSL
CLQRGYQVADLSVVYPIARGTGLCCRPSGLLRFWQNRPPLRGLPGCSA
>AHV94294.1 bacterial extracellular solute-binding s, 3 family protein [Bordetella holmesii ATCC 51541]
MKLDDKIRAAFLVEGRLRASINVGNPILARRQEQGGAAGVSVDLAREFAKWLQADLELVVFASAGESVDAVAAENADIGF
FAIDPKRAEQIAFTPPLTSSSRGPISCGRTRLSWHGRRSISVGRR
>AHV94295.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MNSRPSDATPTRAELLARLEPSAPWDVIVIGGGATGLGTAVDAASRGFRTLLLEGADFAKGTSSKATKLVHGGVRYLAQG
NVSLVREALHERGLLARNAPHLAWPLGFVVPAYSMLDQPFYGVGLKLYDMLAGKLNLAPSRWLSSRETLARASTLAPAVN
GQRLRGGVLYYDGQFDDARLATALMRTLLDLSGTAINYVKVVGLTRDAQGRIDGVRTHDTIDDTQHTVSGRCVINATGVW
VDAVRRMDDPAAQTMVAPSQGVHLTLPRDFLPGEQAILVPKTDDGRVLFMVPWNGHTIVGTTDSARTDLPIDPRPMPGEV
DFILETAARYLTRKPTRADVTSVWAGLRPLVKATGDASTKSLSREHTILTAKSGLITVTGGKWTTYRRMAQDVMDTAISK
QLLPQAPCRSAQLRLHGAPAADARPLAPQGTPDSYYGTDLPALRALPGADRMLVQASGLTEAHVRYAARHELAQSVEDVL
ARRNRALFLDAAAASVAAPEVARILAQELDRDDAWQQRTVADFEAVAATFRLPD
>AHV94296.1 hypothetical protein D560_1593 [Bordetella holmesii ATCC 51541]
MARLPRLYAPGLPQLVQANFVQSLASPSQPAPSDILNQLAGWLGESAQRHKVAVHGWVLANDRILLLATPADEEGLPRLM
QTLGRNLAARLRGGRVFAGRYRSALLEPGVWVMPSLVWLETYPVRSGSSVEADTWPWSSAASHTGGSSVAAAQWQSDHAD
YWSCGNTPFDRQANYRKLLHDGLSRDQTQRIEQAVSGQWALGGPDFIASLTHTASRRVAPGQRGRPRKKPASLSPEGSDD
LPPGTPN
>AHV94297.1 HAD hydrolase, IIB family protein [Bordetella holmesii ATCC 51541]
MQPLAALPAPVAASVRTVLTDIDDTVTTDGRLTAAAYMALERLERAGICVIPITGRPAGWCDHIVRMWPVRAVVGENGAF
YYAYDRSAHRMKTHYWADAASRRADRARLDAIRDRVLREVPGTALASDQAYRAADLAIDFCEDVPALPQDAVNRILEIFT
EAGAQAKVSSIHVNGWFGDYDKLSMTRRLFERELGQSIMQALSHTLFIGDSPNDEPMFEFFPLSVGVANIGAQLHRIQHT
PAFVTPSRGGEGFVEMADRLLAARHGHGG
>AHV94298.1 hypothetical protein D560_0644 [Bordetella holmesii ATCC 51541]
MRLTRHWYCTNIEFQHDSSHSQELPALCALIRPSLRQTLPGFIPFEFGSRKMLLGKIALD
>AHV94299.1 phosphoenolpyruvate carboxykinase family protein [Bordetella holmesii ATCC 51541]
MTQTAEAKLPPLNVPAYVKHARLIEWVQSVVALTQPDRVVWCDGTQEEYDRLCEQMVPACTMRRLNAEKRPNFYLACSDP
SDVARVEDRTFICSQREEDAGPTNNWAAPAQMRATLQGLFQGAMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVVVNM
RIMTRMGRAVWDVLGADGEFVPCVHSVGKPFAAGQADVAWPCNPVKYIVHYPETREIWSFGSGYGGNALLGKKCFALRIA
STMGRDEGWLAEHMLILGVTTPKGRKYHVAAAFPSACGKTNFAMLIPPSGMDGWKVTTIGDDIAWIKPGADGRLRAINPE
AGYFGVAPGTSEKTNFNAMATLKANVIFTNVALTDDGDVWWEGMTDVPPAHLIDWQGQDWTPEIARETGRKAAHPNARFT
APAAQCPSIDPEWENPQGVAIDAFIFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGKQGVVRRDPFAMLPFCG
DNMADYFNHWLSVGQRLSDAGAKLPHIYCVNWFRKGPDGKFVWPGFGENMRVLKWMLGRLDGDAGGQEQVFGISPSYGDI
DWTGLEFTPDQFQQVISVDAPAWREELGLHGELFEQLARGLPPALSNTKSEIERRLVA
>AHV94300.1 ybaK / prolyl-tRNA synthetases associated domain protein [Bordetella holmesii ATCC 51541]
MSKSRHVSETPATQLLKQHNVAFTEHTYDYVDHGGAGEAARQLGLDPHAVVKTLVMEDEAARPLVVIMHGDREVSTKNLA
RQAGLKKVSPCQPDVAQRHSGYQVGGTSPFGTRKRMPVYVEESILAYPEVYINGGRRGYLVGIAPQVLVALLDAKTVSVG
LE
>AHV94301.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MALGYGDFTVLYGITLEVSAGEVVAIMGGSGSGKTTLLRAATGQIVAQRGQVLAFGQDVAAASAQTLQGLRKRMGVLFQQ
GALFTDLNVYENVAFPLREHTSCSEAEILDKVLDKLDAVGLRAAAHLRVAEISGGMARRVALARAVVLEPELILYDEPFA
GLDPSRWASPRALSGIFPTGCTVPRC
>AHV94302.1 mandelate racemase / muconate lactonizing enzyme, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MQDAGSDLVITSVQARAVQVPLEHPIRTSVGVVDAAPLVLIDLYTSRPEVVGRAYLFTYTPLALAPTCLAVRQLAGVLQG
QPLAPVELDRLLSCRLRLLGRTGLMGMACAGLDMAAWDALAVAHGLPLARLLGGECRPAAGV
>AHV94303.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MALPAAWSRKTLIHLACAAALSGLAPVGSHAQTTADTVATHLNRDYSIPAGSLEQVLARFAAESGVLLASPPGLTAGRSS
PGLSGNFSLPTALNAILAGTGLHAIRDPQGQYRLQADTQAVFLLSPVAVTGRDLATTEGTGSYSANITTIAKGDLALRDI
PQAVSVITRQRMNDQGVTDVREALNYAPGVSMVSNEPGGQFYSRGFFIQSYQFDGVPLERQLYARGSAFNSDTAIYDRIE
IMRGPQALFEGAGDPSGSVNLVRKRPTQERQFIVTGRVGSYDQYGAQVDFGGPLNESATVRGRVVADYETKGSFRDYVDS
NERTFYGALDIDLGPATTLGLGYSRENPYGVIDWSGLPNYGDGSMPEYSRSTNLSAKWNHAYKTQNTWFADLTHRFSNGW
KFKAAVVRVDETNDIKYLLRSGRLGPPNTYRGDDLPPDLVRHRHRAQG
>AHV94304.1 6,7-dimethyl-8-ribityllumazine synthase [Bordetella holmesii ATCC 51541]
MNPYILTPDLNGEGLHIGIVRARFNEEIGQTELTACLEELGKLGVDERDVMVVSVPGALELGVVLARMAESFEFDALIAL
GAVIRGETYHFEVVSNEMATAITCISLETGIPVANGVLTVDTDEQAAARAEGKGRDCAQVAVEMANLVAALEPEEDDEDD
EDEDFDDEEDER
>AHV94305.1 carbohydrate kinase, FGGY family [Bordetella holmesii ATCC 51541]
MLEGSVFVAGAAVQWLRDGLGIIQHAEDIEPLAASVADTDDVFMVPAFAGLGASELRVDGGAARNDLLMQMQADLLGVPV
VRPRIAESTARGAAGLAGLAVGFWSDQQEFAAQWQAERRFEPRWPADVRLARMQRWRQAVELSKHWTLPA
>AHV94306.1 ATP-dependent protease La [Bordetella holmesii ATCC 51541]
MSASQTLPSDPIDLPLLPLRDVVVFPHMVIPLFVGRPRSIRALEVAMEAGKSIMLVAQKSAGKDDPTPEDVYDIGCVASI
LQMLKLPDGTVKVLVEGSQRARIDSIQDADSHFTCQVTPIAPDATAGPEAEALRRAIVAQFEQYVKLNKKIPPEILTSLA
GIDDAGRLADTIAAHLPLKLEQKQKMLEIVPTAERLEGLLAQLETEIDILQVEKRIRGRVKKQMEKSKRDYYLNEQVKAI
QKELGEGEEGADLEELEKKIIAAHMPKEARKKADAELKKLKLMSPMSAEATVVRNYIDTIINLPWKKKSKINNSIANAER
VLDDDHYGLEKVKERILEYLGVQQRVDKVKAPILCLVGPPGVGKTSLGQSIAKATNRKFVRMALGGVRDEAEIRGHRRTY
IGSMPGKILQNMSKVAVRNPLFLLDEIDKLGMDFRGDPSSALLEVLDPEQNHTFQDHYIEVDFDLSDVMFVATSNTLNIP
PALLDRMEVIRLSGYTEEEKIHIGSDHLLPKLMKNNGVKENELTVEESALRDIVRYYTREAGVRSLEREVGKICRKVVKQ
LLTAKDKGEPETGPVVVNAENLDAYLGVRRYTFGMAEKENQIGQVTGLAWTEVGGDLLTIEVADMPGKGNIQRTGSLGDV
MKESVEAARTVVRSRARRLGFADSVFEKHDMHVHVPEGATPKDGPSAGIAITTAMVSALSRIPVRADVAMTGEITLRGEV
LPIGGLKEKLLAAHRGGIKTVLIPEENVKDLAEIPDNVKNCLEIVPVRWIDKVLEMALERLPEPLADEEPVKETIVSKPV
ESGDPVLKH
>AHV94307.1 hypothetical protein D560_3383 [Bordetella holmesii ATCC 51541]
MLFLLSPAKKLDYDSPVHVETHTQPLFVDQAAALIKVLKTKSADEIAELMSLSPALAELNAGRYGAWKRSFTQANSRQAV
LAFNGDVYEGLQADTLSARQLDWAQDHVVILSGLYGALRPLDLMQPYRLEMGTRLHTPKGKNLYEYWGSGIAEYLNERQA
GAKAPVIVNLASEEYFKVVDLKTLKARVVQCVFQDWKNGAWKVISFHAKRARGLMARYAIAHKVARPEGLQGFDSEGYAY
DAAASSADKLVFRRKQA
>AHV94308.1 merR regulatory family protein [Bordetella holmesii ATCC 51541]
MSSSTWTISELAREFDITPRTIRFYEDQGIVSPQREGRNRIYGARDRTRLKLALRGKRLGLQLSEIRSLIDMYDGPSDNA
AQLRQYLSVLAQHRATLEQQQRDIEDTLAEISAQEQQCHSLLASKR
>AHV94309.1 hypothetical protein D560_0124 [Bordetella holmesii ATCC 51541]
MDPDDSDDEQTESLGQTDGDFQAWLLREDGWHRDPSGAVLSGVSLLDRPTLDCITPYTPGFAPDPKRRGVWTNHCSHCKQ
PILTGQLMAFPGSAFTPSDADQARAVGIQRMTSPLQASVELRWTDAYPDLWPLLQHLGFADHNPP
>AHV94310.1 glucose-6-phosphate isomerase [Bordetella holmesii ATCC 51541]
MILRALRHQGIDREVRFASNVDSHAVADSMHQLDPHSTLIIIASKSFTTTEPLANAQVAIHWLEDAGVADPLKQVVAITA
NVQAARDFGIAPEHIFQFWDWVGGRYSLWSAIGALPISLALGCDTFDQLLAGAADMDEHFLRTPLAVNAPVQMALAGMAN
RSVMGFETLAMAPYDSRLTHLVPWAQQLEMESLGKVATRDGSPAGVPTGPVVWGMTGTDCQHTFFQWLHQDTAGAPVDFI
FCERPDHRYEEHHRLLIANCLAQRAALLRGKSFDEALVECSALTNDPQEARVLAQHRIHPGRRPSTLIVLPRLTARTMGA
LLALYEHKVFTQGVLWGINPFDQWGVEFGKALARRIIDELGQPGHAPKLEDPSTRHWIEVLSRTHSGA
>AHV94311.1 bacterial Ig-like domain family protein [Bordetella holmesii ATCC 51541]
MQSLLPGSVLARTAPALTPGSDAIAPTAPPTWIHKLADELRGLAARQREGQVAQLDGRYLRLQAQGELNQALQDSVTRAR
ESGLPFLRRLEGGVNIDVESGRSALELNAIEEVHRAGKRSVLAQVGAHNENDRPTASAGLVYRHDTAAGWLLGTNAFVDR
EFGKQHWRASVGMEAIAPEFTLLGNVYLPLSGWRGSRHEERLQERPASGFDLGLSYRPEAWRGLSLTASYFRWNGAQVDV
FDSGRGRYRPAGFKYGLQYRPVPMLSVGLEQTQVSGGQRQLRLQLGLSIRLGQPWAKQWRPEAAPPIEPSLDRQRSALVR
RETRIVLKTRRKEIMLPLSAHPIITDAVDGRLTVAGLTQAFATVSLRMPDGSVGTTRADAAGRFRYTSARDQPSGNVLLR
AVNIYGDTSVELNLVYVDEVVLGKLNVALLALAPQPADRALALSGKTQPSMEVVAHFPNGESVSAKSDGKGLFRVRSRRA
VGQGQVVVRAIDPQTRQEARTAAHYQPPVAVAPTIDTVDTDAATGQVTVQGQAEPGSDVELIFPDGSRQRVRASAEGRYR
LTSAADVPSGQLRALRVPRSGEAEAASLYTYVDVSDKTPPGAPEFASVLTAADTGRVSITGRAEPGSDVDVLFTDGSHQR
VHAGKDGAFQAVSHQDIPAGPIVARATDAAGNVGPQASYDYTDGVDKTAPRTPTIDVMEAAQDSGRVTVKGAAEPGAWVQ
VTFPDGSRQRVQADSQGAYHTTSDHDVESGTIVAVAVDAAGNSSQQARQVYVDLVDRTAPGLPVIDRVQARQDNGVVTVE
GTSEPGALLSVSFPGGEVKQVRAQADGRYRVTSSDHIEAGAIRVEAEDEAGNRSPAAIHSYVDTVDRRAPDAPSILAAQA
DPATGRVTLTGNAEPGAAVTVRWPDGTVSKAVAGPDGSYAVTSDRDQPAGEIMVSVTDAAGNQSSAMHQAYVDHVDATAP
AAPTVSSATADAHTGRVTVQGLAEAGSTVTVRWPDGTRTTTTAGADGRYTAMSERDLASGDIVLEANDAAGNTSGSARHV
YTDDVDATPPAAPSIDSALADSRTGRVTVSGAAESGASVTVHFPDGTTVQAKADANGRYTATSNGDIGSGQITAQASDDA
GNSSSATPHTYRDMVDATPPAAPVISALTTDSQTGRVTVTGQAEAAAMVTVVFSDGSRQTVTAGPDGRFEAQSAKDIPTG
AISVMAADAAGNQGPQALRQYMDEADKTAPALPSIDGLDTNDSNGHVTVRGKAEPLAWIDVTFPGGSKKTAQADGQGRYR
VTSDKDIGTGEVLVVARDDAGNMSLPAKQQYRDSWSGKLPPSAVLFELSSRQNLSITKSAISGGRLWMLYLDPKYAGKVQ
VDVQPTNVTNGHAAVVAQYVKRNIEKTLRYDRIKRRNVYAIGFHDQTSGNKSVNKVPAGRYPNLLELRVTVPGEGVYRMT
LNVQVHD
>AHV94312.1 putative transposase InsI for insertion sequence element IS30B/C/D [Bordetella holmesii ATCC 51541]
MAVYFCDPGCPWQRGTNENTNGLLRQYFPKKTSLANYTQDDLNEVATKLNNRPRKTLGFKTPAEALDELLH
>AHV94313.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIP
LRGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV94314.1 substrate binding domain of ABC-type glycine betaine transport system family protein [Bordetella holmesii ATCC 51541]
MRFTPLKALAATAIFSVFAGAAHAAPQCELKRPVKFGAMNWESNLVLVDVERFIMEKGYGCKTETLPTETLPALAALERG
DLDINSEIWLNSVADPWERAQKTGKVKRVGDIYMGGEAWFIPRYTAERYPELKSAADLPKFKDKFKDPEEPGKGRFYGCP
AGWGCEVTSTNLFHALKLDDSFTLYSPGTGAAQKAALMSAYKRKQDVVFYYWFPTPLVGAMDLVKLEMPPYDAEKHKCLT
SPKCDKPQASAYPENPVFTAVNTAFSKEAPELTGFLSKVNVPRAQMDETLAHMESSGDDSAEVAQWFLKNKADIWKKWVP
ADVATRVEASL
>AHV94315.1 phosphate regulon sensor kinase PhoR [Bordetella holmesii ATCC 51541]
MIWLRTLLLIVLWAVISLLLHALAGSPAGWVLFSAAMTAMVLWRSWRLQRVSAWAHDPDTAPPAGVGPWEDILAPLYRYT
RARRRELAELQDTMQGMLAAAQALPDGVVTLNEDYQIEWGNRMARRHLGLRLPADRGQNLMNLLRSPEFVAYAHRSNWPE
PILVRVGQSGQERVMMIQLATYASSRRLLITRDVTQIEKLETTRRDFVANVSHELRTPLTVLAGFLETLHDMPPEALGEE
QRSQYLAMMLEQAQRMQAIVEDLLTLSTLESSPGTDPVAVNIQALLQTARQQAEALSGGRHHFEWQVDANLDVLGSGSEL
ASALSNLLTNAVRYTPEGGHITVSWQGTPDGGARYSVRDTGIGIPARHIPRLTERFYRVDRGRSRAVGGTGLGLAITKHI
VLRHDAELLIESEPGKGSTFSLLFPPDRVVPAEPA
>AHV94316.1 hypothetical protein D560_3612 [Bordetella holmesii ATCC 51541]
MRQLHANSPGKSIGADLLVGRRNIVIPHALLTRRRRLTAASMSRLF
>AHV94317.1 putative ABC transporter permease domain protein [Bordetella holmesii ATCC 51541]
MHATIAHYQRTQTRRLALTLALALAILGALVLDMATGPSGLTWDTLIRTLLHPGQAGTAARVIVWDFRLPYALTAALVVN
CQ
>AHV94318.1 cytochrome c-552 [Bordetella holmesii ATCC 51541]
MACHQVDSKRVGPPLNSVAERYAGHPEAIDYLANKIRMGGRGAWGAVPMPAQSHVSPEEARQLAQWVLSLTPAKKP
>AHV94319.1 inosine-5'-monophosphate dehydrogenase [Bordetella holmesii ATCC 51541]
MRLVQKALTFDDVLLVPAYSEVLPRDTSLSTRLTRNITLNIPLVSAAMDTVTESRLAIAMAQEGGIGIIHKNLSADDQAR
EVARVKRHEFGIVIDPVTVTPDMKVRDAIALQRQHGISGLPVVEGGKLVGIVTNRDLRFEDRLDQPLRNVMTPRDRLVTM
HEGATLDEAQTLMHKHRLERVLIVNDGFELRGLATVKDIVKNTEHPYACKDAQGQLRVGAAVGVGAGTEERVEKLVAAGV
DVIIVDTAHGHSSGVIERVRWVKQNFPKVEVIGGNIATAAAALALVEAGADGVKVGIGPGSICTTRIVAGVGVPQITAIS
DVAKALEGTGVPLIADGGIRYSGDVAKALAAGAFSCMMGGMFAGTEEAPGEVVLFQGRSYKSYRGMGSLGAMADGSADRY
FQDPANNADKLVPEGIEGRVPYKGSVLAIIYQLVGGIRASMGYCGCATIDDMRTKTHFVEITSAGVRESHVHDVQITKEA
PNYRAD
>AHV94320.1 glutamine-fructose-6-phosphate transaminase [Bordetella holmesii ATCC 51541]
MCGIVGAVAQRDITPVLVEGLRRLEYRGYDSCGVAVYMDGHLRRTRSTQRVSELAEQVAQEGLAGFTGIAHTRWATHGVP
ATYNAHPHFSALGKDEPRIALVHNGIIENYAELRTELQQAGFVFESQTDTEVIAHLVNHLYNGDLFDAVQQAVKRLHGAY
AIAVFCRDEPHRVVGARQGSPLVVGVGKGENFLASDALALAGTTDQIIYLEDGDVVDLQLARVWITDHDGKQVERKVNTV
QVHTGAAELGPYRHFMQKEIFEQPRAVGDTLQDIESITPELFGDEAYNVFKDIDRLLILACGTSYYAGLTAKYWIESIAK
IPVAVEIASEYRYRDSVPNPKTLVVTISQSGETADILAALKHARSLGMPHTLTICNVATSAMVRECELAYITRAGVEIGV
ASTKAFTTQLTALFLLTLALAQTRSLLTEQQQADYLKALRHLPSAISSVLAFEPQIMAWADRFATKENALFLGRGMHYPI
ALEGALKLKEISYIHAEAYPAGELKHGPLALVTEHMPVVTIAPKDALLEKLKSNMQEVRARGGELYVFADADSKIVNEEG
MHVIRMPEYYGVLSPILHTIPLQLLAYHTACVRGTDVDKPRNLAKSVTVE
>AHV94321.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MPSVQPAILLRSFLQIAPYLASRGISPLEFFQRAGISPNIFQTPDIWLPRTLCFRIANQMAAIAQDPFGGAHVGRLMELR
ALGPWGKHVLSSANVAQACAMAATRAAMLHQGGDIRIVTEGRTTRLIHRFTAPLEEDPQQFTLGTLAVLRKVALLAGAPA
AVRVHLKAARSPGDEALEESLGPNIETGAEFDMIEFDRDLLDIPLQGYRDEARKVTEALQSTIRTAGLLIDHIADQQDIK
LQSVARHIGLSPRTLQRRLKSSGVDFEELRDETRRSEALRLMQLRRYSATEIAYMVGYSDPAHFTRAFKRWTGQAPSRFL
RQAKDCPPKATLAPNGKP
>AHV94322.1 NADH-Ubiquinone/plastoquinone (complex I), various chains family protein [Bordetella holmesii ATCC 51541]
MSLLLILALPFAGSLCAALLPANARNAEAWLAGLVALATTLLVASLYPQIAAGEVIRVQIPWAPALGLQFALRMDGYAWL
FSFIVSGMATLVVLYARYYMSPKDPVPRFFSFFQAFMAAMLGVVLSGNLIQLVMFWEMTSLASFMLIAYWHHRADARRGA
RMALTVTGAGGLCLLGGVLLLGHIVGSYDMDVVLRSGDLVRADPWYPAALVLVALGALTKSAQFPFQFWLPNAMAAPTPV
SAYLHSATMVKAGVFLLARFWPLLAGTDEWFWLIGGAGLCTLVLGAYAAIFQQDMKGVLAYSTISHLGLITLLLGLNSPL
ALVAAVFHMVNHAIFKASLFMAAGIVDHETGTHDLSRLSGLYSAMPLTATMAMVAAASMAGVPLLNGFLSKEMFFAETTF
ITGDHVLEYGLPLMATIAGAFSVTYSLRFILQVFFGPPSTDLPRAPHEPPRWMLFPSALLVLLCLVIGVAPGLTVGPVLD
IAAHSILGPDMPQFSLAVWHGFNLPLVMSLVAMTAGVLLYLGLRAQQAAHPGRVPFIYRLDGRRTFEFLFEGSAVVARWV
LRRVSSPRLQVQMLIIISVTLLAAWLPLRLHAWLDGQGPRTPADPTFLLLWLAGGACAVGAAYQAKYHRLASLTLSGGAG
LVTCLTFVWFSAPDLALTQLAVEVVTVVLLLLGLRWLPRRIVGEGEDVRPDVKARLRRARDLGLAALAGISMSAIAYAML
TRPLGETISSFFVEEALPEGGGTNVVNVILVDFRGFDTLGEITVLGIVALTVYALLRRFRPAQESIEMPRQQREQDGLTM
GELPPSPDVKSPLPQGAMRIPAVLVRLLLPIAVLVSVYLLLRGHNLPGGGFVGGLVMATSVILQYMVGGVYWVESRSRLN
PQHWVGLGLLAAGAAAMSAWLALRPFLSALAWDIHVPLIGKIHLSSVLLFDLGVYMLVVGATVLVLVALAHQSLRAQRKL
VAEAQQADAEAQAATAVKGA
>AHV94323.1 aminotransferase class IV family protein [Bordetella holmesii ATCC 51541]
MIPGMPGESLVYLNGEFTRADQAKISVLDRGFIFGDGIYEVVPAYQGKPFRMAEHFQRLERSLAAIRIPMPMDRAALTAV
IERLIAAAPSPDCLVYLQITRGVYKRDHAFPAQAITPTVFAMVTPLVPPSAKQRDQGVAVISIEDERWLHCEIKSVSLLG
NVLARQQAVEAGVDEVIQYRDGFLTEGSASNIWIVRDGKLLAPPKNNLILEGIRYGLMAELAEAAGVSFEARRIARAEVE
SAEEVLVTSATKEVLAVTRIDGKPVGDGKPGPIYRQLRAGYDARIAAL
>AHV94324.1 psiF repeat family protein [Bordetella holmesii ATCC 51541]
MIFRTSTIVAGLCLALMAGGTAVAQTAAPAAATKEMTPQQKRMSDCNASAAGKKGDDRKTYMSSCLKGEAPAKPLTPQQQ
RMKDCNAKAGAQSLAGDQRKTFMSTCLKGG
>AHV94325.1 tryptophan synthase, beta subunit [Bordetella holmesii ATCC 51541]
MKPYDLPDAKGHFGPYGGVFVAETLMHALAELRAAYDTYRVDPNFIEEFNYELKHFVGRPSPVYHAARWSKKLGGAQIWF
KREDLNHTGAHKVNNCIGQALLAKRMGKPRVIAETGAGQHGVASATVAARYGMECVVYMGSEDVRRQASNVYRMKLLGAR
VVPVESGSRTLKDALNEAMRDWVTNIENTFYIIGTVAGPDPYPRMVRDFQTVIGKECLEQMPEATGRQPDYVVAAVGGGS
NALGIFHPYIPYENVQLIGVEAAGEGMETGRHAASLAAGQVGVLHGNRTYVMQDADGQVQETHSVSAGLDYPGVGPEHAW
LKDSGRASYVGITDDEALAAFHDCCRIEGIMPALESSHAIAQAVKMAPSLSQDKIILVNLSGRGDKDMHTVAERGGIEL
>AHV94326.1 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein [Bordetella holmesii ATCC 51541]
MNASPKWRLETVAVHGGYRPDPTTRAVAVPIYQTVAYAFDDTQHGADLFDLKVPGNIYTRIMNPTTDVLEQRVAALEGGI
AALALASGQAAVTYAVLTIAEAGDNIVSSSTLYGGTYNLFAHTLPQYGITTRFADPRDLSSFERQIDDRTKAIFAESVGN
PLGNITDIAALAELAHRHGLPLIVDNTVPSPYLLRPIEHGADIVVQSLTKYLGGHGTSLGGAIIDAGTFPWAQHKARFKR
LNEPDVSYHGVVYTEAFGAAAYIGRARVVPLRNTGAAISPFNAFQILQGIETLALRVDRIVENAVKAAGFLRGHAKVEWV
NYAGLPDHPEHALVQKYLGGKAPGLFTFGVKGGRQAGARFQDALQLFTRLVNIGDAKSLATHPASTTHRQLNPEELARAG
VREETVRLSIGIEHIDDLIADLDQALAQV
>AHV94327.1 aminoethylphosphonate catabolism associated LysR transcriptional regulator family protein [Bordetella holmesii ATCC 51541]
MLVAELKSFYAVARCGSVTKAALQLGVSQPTVTGQLRQLESRYAIELFYRQGRSLRLSDAGHRLMPLVEQLMLQENEIEF
RLRDACELREGNLRIGATGPFYIMDTVRRYNERYPGIDLHLSIGNSQSMLQALREYRIEIATSSYAMEDRQLYRRMIAAD
PLHVVVHREHPLARHKAIGLSDLQPHTLLLREPGSMTRQLSEQALASAGVTPARILEIGSRESIRQAVLCNLGISLIPAR
EAPAHPELAALPITGNPIMMHEYLYCLRERQPVQLIARFLELAPQASTH
>AHV94328.1 type I secretion membrane fusion, HlyD family protein [Bordetella holmesii ATCC 51541]
MTHDPAQEGSMEADAKVGSGSRALLWLVVAAVGSFVAWAHWAELDKITRASGQVIVSSRNQVIQAPDGGVLEEMLVREGD
TVRRGQTLFRFQQTRARAAMQESVAKVAGLKVAVARLQAEVFETPLQFDADASAFPELRDNQMALMRRRQAALSEELGAL
ERARKLAQEELNLNQPLVARGDVSRAEVLKLQRQVVDLTGQITNKRNKFYQNAQADLAKAQEDLEGARQVLAQRQDQLEH
TEVYAPMDGVVRNVRLTTAQGGVARPGDEILQIVPVDEDLVIEAKVKPRDVAFIKAGLPSNIKLDAYDYAIYGSLQGRVS
YISADTLYDESKEGAQQPYYRVQIKTDARDLGAASGQPIQTQPGMTATVEIKTGKHSVWDYLTKPITKTLGESLQER
>AHV94329.1 calcineurin-like phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MDVAIAGLAPEFEGYRIAHLTDLHTSSLLRGPWLAEVVARTNAAQPDLIVISGDLVDGTPQARAQDYPAFGHLRAADGVF
GVTGNHDYYQGYPQWLDVFGQQGIHMLMNTHVVLRRGQGELVLAGVTDQIAPTRDAAGPDVAQALAGRPRGAAVVLLDHR
PGAARANRAAGADLQLSGHTHGGHILGMDRIVARFNGGFVSGRYDVDGGQLYVSNGAGLWPGFPLRLGRPSEITVMTLRA
AP
>AHV94330.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MLTTQDHFIETDHGRLFARRWHAGETGLPPVVLLHDSLGCVALWRDFPARLAQAAGRDVIAYDRLGFGCSDAHPGRLDLD
FVSQEAESGLRCVREQLEIGPFVAMGHSVGGGMAIVAAGRYAHDCWGLITESAQVFAESRTLSGIRQAREDFALPGQLDR
LKKYHGDKAAWVLSAWVDSWLSPDFVQWNLDTALAEVRCTVLALHGDSDEYGSLIHAERIAGQTGGQKKVFAQCGHVPHR
EQPEAVLAVIGAWLA
>AHV94331.1 hypothetical protein D560_1690 [Bordetella holmesii ATCC 51541]
MTTDLAHRIDRRLDAHDWNAVRLSLDGAGRAVLPGLLRPGECRQLAQAYDAGGDRYRSRIVMARHGFGRGEYQYFAYPLP
EGLAVWRVALYARLAPIACEWGARLGLSADYPAHHADYLARCHAAGQNRPTPLILRYREGDYNCLHQDLYGAEVFPLQCA
VLLSAPGQDFEGGEFVMTEQRAGHPAQADVLPLQQGDALVFAVHHRPAAGPRGWHRRAMRHGVAPVRAGERHTLGIIFHD
AT
>AHV94332.1 transcription elongation factor GreB [Bordetella holmesii ATCC 51541]
MNKAFVKESDRDDDDDLPQAQAQALPAGTRNYMTPEGYARLRDELAHLMTVERPSVVQIVSWAASNGDRSENGDYLYGKK
RLREIDRRMRFLTKRLELAEVVDASLQPNRDQVFFGATVIYADKTGEEHTVSIVGVDEAEPLGGKISWISPVARALIKAR
EGDTVVLRTPGGIQELDILEVRYPPRQD
>AHV94333.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [Bordetella holmesii ATCC 51541]
MTLYDVPAPAKLNLFLHIVGRRPDGYHLLQSVFRFVDLCDTLSFEARSDGLIERAYDLPGVAPEQDLIVRAARALQAACG
VAQGARIGLVKRIPQGGGLGGGSSDAATTLIALNRLWGCGLSRRDLMALALPLGADVPVFVFGQPAFAEGVGEDLQAVSL
PEAAYLLVQPEASVPTAEIFSAPDLTRNSKHVRITDFLALPNFGFGRNDMEAVVFRRYPQIEASVRRLGELGIRVRMSGS
GACLFAEYPTLSAASQAQDVLAKFENTATMRGAGKIVSETQPEFQLGFRLIKACAGLNEHPLRSWIAS
>AHV94334.1 thiF family protein [Bordetella holmesii ATCC 51541]
MILPDTVSCDIDAERRFGGLARLYGPEAPARLRAVHVAVAGLGGVGSWTAEALARCGVGALTLIDLDNITESNVNRQIHA
LSSTVGQAKVDAMAERIAAINPECRLTRVEDFVEPGNVGQVLAGEYAMIVDCTDQAAAKIAMVLYARARGLPMLLCGGAG
GKTDPLTLRAGDLSQAVNDALLSKLRNTLRREQGYPRGSDAQGRALKRVPRMGVRALWFDQPAILPSAWQTAEPAPDGAP
QGLSCAGYGSVVMVTAAMGMAAANEAVQAILAAPATGG
>AHV94335.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MQLMKCWLAAAALAAASLTHAADPERIVVPYAVGGITDLYGRVLAEKLQAGQSHPILVDNRPGGGGAIGTAFVAKGAGDG
RMLLLGSVGTATNPAMIRALPYDPNDLVPVAQVAISPLVLYVRASLPNQLPELIDYARQSPGRLSFANSGVGSSPNLAAA
LFARELGLKVTHVSYRGTSAAINDLLGGQVDAYFDTPQAMNHVASGRIRALAVAGPQRLPQAPDVPTLDELGIPNVHASS
WWGIFVSAKTPPAEVQALQQRLAKVVADPAVQQRANEMGAIAVYRDQAAFQAFFDSEVRRWGAIIAAEHLSAQP
>AHV94336.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MTSQSLAPQQDAEQEGLILDMLDRFLAVEVKPHVQRLEHDDIYPEEIVEKMKEMGLFGCIIDPEYGGLGLSTTTYAKIIE
RMSAVWMSISGIINSHLIMAMAVQRSGTPAQKQEFLPRFATGELRGGVGLTEPDAGTDLQAIRTVARREGDTYVVNGSKM
WITNSMYGNCLALLVKTDPQAEPRHKGMSLLIAEKGPGFIVSKKLEKLGYKGIDTCALTFEDYRVPADRLVGGIEGKGLQ
QVLGGLELGRINVAARGLGVAQVALDEAVAYAQVRKTFGKPIAEHQAIQLKLGEMATRTQAARLLVYAAAAAFDRGERCD
MEAGMAKYFATEAGQENALEAMRIFGGYGYSKEYNVERLYRDAPLLLIGEGTNELQRIIIAKQLIERNPA
>AHV94337.1 calcineurin-like phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MLSAPLDARPQDAPALLLQLTDSHLLQDPQARMFGVNTDASLRAVLDLARRQEGSPDLMLLTGDLAQDGSAAAYQRLRAH
LRDVAHPVRCVMGNHDAAGQMRQQLSDWSQPVHDLPGWRIIMLDSTVPGQDFGHIDAGQFALLDQALREAGERHVLVALH
HNLARVEGAEHDTLMVDNAAAVFARLSDHPQARVALWGHIHQEFDCRHHHLRMLGTPSTSFQFRLDNGHYAVDPQAPGYR
WLKLYADGSIATGVRRLDAATWAALRDEPLPLESAA
>AHV94338.1 MOSC domain protein [Bordetella holmesii ATCC 51541]
MSLTVRSLHIYPIKSCHGIDLAQSQIGRAGLAHDRRWLIVTAAGQFMTQRQWPRMTLIHTALTGSALYLSAPGMDDIEVA
LDGSQLASEVELVTVWRDSIPARAESAALAGWMSRFLGEPCRLMRVDQQACRPARDEWVKGWRERHPQAADVFEGDHFFG
FADGFPLLVTNQASLDDLNQRLAAKGHAPVPMDRFRPNIVLEGDDWAAFDEDLTVTIDFGHLRVALVKPCTRCSIPDVDQ
ATAVANPEPGQTLAAYRNLDIGVVFGQNGIVDVRAETTLRVGDSAEIELNF
>AHV94339.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV94340.1 metA-pathway of phenol degradation family protein [Bordetella holmesii ATCC 51541]
MNYDIDHFRAPGSSDNLPGHNTGTVTALANRFVWMTNQKFLGADYGMEAIVPIIRTSLTVNAAGISDSRSGVGDIYLGPL
LLGWHGTQWDAVAAAGLWLDNGSTSHPASPGKGYKSTMLTGGMTYYFDSAKTYSASALMRYELNRSNSDGYRSGDQMTVE
WGLGKSFGAFSAGLVGYSQWQTRDDRGSGATSDKASRHAIGAELVYPIASAGLVLKGAFYKEVSATAGSGALPKGSLARL
TLVKAF
>AHV94341.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MGGDYYTGLVLKIMIYGIFALGLQLLVGSAGLVSLGQAVFFGLGAYAAALLSPAGSAASLWWLLPAALAAAGLYALITGA
LVLRTKGIYFIMVTLAFAQMAYYVMHDTKLGGGSDGIYLYFRPQPSIGGWLPFDLSDARTFYFFVLACLAISWVFLALLR
RSPFGAALTGIGINEQRMRAAGYSSYPYKLAAYVIAAILAGLAGFLYALKDGFVTPELLAWEQSALVLLMVILGGQTRQA
GAVLGAAALLLMQEAFQSQDIFGDFADHWHLPLGIAIIALVAWLPQGLIGLVSPTRPKPIQAADPLPISGDSHA
>AHV94342.1 malate dehydrogenase [Bordetella holmesii ATCC 51541]
MSKPAMRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLQEVTAHSDPKTA
FKDADVALLVGARPRGPGMERKDLLTVNAQIFTAQGRALNEVASRNVKVLVVGNPANTNAYIAMKLAPDLPAKNFTAMLR
LDHNRALSQLATKSGKAVAGIEKLVVWGNHSPTMYPDYRFATVDGQPLAKVINDDAWNRDTFIPTVGKRGAAIIEARGLS
SAASAANAAIDHVRDWVLGSNGKWVTMGIPSDGSYGIPEGIIYGFPVTTVNGEYTMIKDLEIDAFSRERMDFTLKELLEE
RDGIKDLLK
>AHV94343.1 lysR family transcriptional regulator domain protein [Bordetella holmesii ATCC 51541]
MKILPLTLPTTSAEIPNSRSFYLAARASEAGRLPYEAREAILVAVESLYDKEIVPALRLPSATLWRSLRR
>AHV94344.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MELRQLRYFVKVVECGSLGRAATELGVVTSALSQQISRLEGELSTRLLTRTSTGVVLTDAGLAFLRQAQLSLRHADDAMK
AARESRLSGHVSIGLVQTTASVLALPFMRAMRQRYPDVRLRLVESLSGHLSTMLNARQLDLAIVFQTETARRWSVMPLLD
ESLFLIARDDMPGLPRPGGCGCAI
>AHV94345.1 hypothetical protein D560_1007 [Bordetella holmesii ATCC 51541]
MILHIDQTFGVWIEQYGAWVYLVLFLIVFAETGLAVLPFLPGDSLLFIAGAFGVNGAIDPVLLGVLLVIAAITGNTLNYW
IGRAVGPRAFTMNVRFLDRGALLKTHVFYEKHGGKTIVMSRFIPVVRTFAPFVAGVAQMPQARFQFFNITGALLWVVGLV
TAGYFFGNIPIVRDHLNTIVLLGLAAAVVPVAAAAALRVVRGRRRNGNAR
>AHV94346.1 hypothetical protein D560_3122 [Bordetella holmesii ATCC 51541]
MAVLVETGDQPQQRGLAGARGPQQGEELPWLDVDVDVDVLEDLVLAIGEPDVAALNADFLHGSVLRRALAG
>AHV94347.1 hypothetical protein D560_1859 [Bordetella holmesii ATCC 51541]
MILSPKNIVFRSKKQSVNYVARSMVLPCLEIFIMTAQTAIPPFHLAFPVRDLAEAREFYGELLGCSEGRSSPEWIDFNFY
GHQIVAHLAPKNAAQTPPMP
>AHV94348.1 HAMP domain protein [Bordetella holmesii ATCC 51541]
MRILVIEDDPDILANVAHHLGARGYIVDCACDGQQGYALAAAHDFDLIVLDVMLPRVDGLQLCRRLRGEDGRVTPIIMVT
ARDTLDERLQGFDAGADDYLVKPFALSELAARVKAILQRAHPAAMARVLHVGDLRLQTDTLQLSRAGQALRLPRRRCSCC
SCSCAPVPPWCRALGWKRRSGAIRRPIATACAPTFTRFGTRSTSPIPRPCCTRCMASAIAWRTKMATDSRLSRHLVLTYL
CLSVAIGAVLSVLSWWTVVKLEEHLQRIDMGMAVERVRGDFLAGKEIGRADRFFHGEPGSAAFPEWLRGIPAGFHKLQQA
GRIWHAMADDHGGTRYVLLRDYTEYEHSQVRSHWVTVAALAASLLAAFGLGALASRRFVRPLLTLAEQVGLRPELPPRTR
LAQAYPPNEIGQLAQAFDETYNQLEQALERERLFTADVSHELRTPLMVISSSAEVLDDTPDLPRAVRVQTVRIRKAATEM
QQHLQTHLMLARGASSAKGFAQASAQEVVEEECQRWLPGPRPWDYGCNAAAVRGRPCNGLRRCCMSWSPT
>AHV94349.1 flagellar transcriptional regulator FlhC [Bordetella holmesii ATCC 51541]
MAIKSVAQEADEILLASAMITLGARLQVLEAETSLSHDRLAHLYREIRGCSPPKGMLPFSVDWFMTWLPNIHSSLFYNVF
SFLHTRTRSKGIRAIIDAYRLYLEHAAVDTSGAPTDEPVLSFTRAWMLVRFFDSGMLQLSACRQCGGHFIAHAHDPQSDF
VCAICRPPPHAGKTRAAARARAGGRAPAGS
>AHV94350.1 hypothetical protein D560_1610 [Bordetella holmesii ATCC 51541]
MKPVMTAQQRRRNRIAGWQGSRTMSEDLHQAAQRKLSFFQTLKAVAWAFFGVRKGAGYREDIARLNPVHVILAGLLGAGL
FVIVLVMVVRWAVSSLT
>AHV94351.1 imelysin family protein [Bordetella holmesii ATCC 51541]
MKSPLFVLAGVLCSVPAWAAPPSDLGQRLAEGYARPAMATLDDSARSMHHELQAWCKTPSQAGTEKVSAAFATLARAWSA
VAFLRFGPLVDNNRFERLYFWPDTRGVMPRQLHSALAAADSAVLAEGGWAGRSVAIQGLPALEYLLYGDPALLRASEPQA
AASQYACAYATAVAGNIHDVAAQLRQAWSAQAQFGRQFTAPAQDNDLYRGSEEVAAEAMKALSTGLQFARDVNLLPVLGA
DAQAARPKRAAFWRSGQTGATLAASLNGLLAFYQAGGYVFATGSQGLADTLTHELKQAAALVASVPASAEAAFTQAQSRE
ALVLAAMVIKNAKDVVDQDIAPALGVTIGFNALDGD
>AHV94352.1 PHP domain protein [Bordetella holmesii ATCC 51541]
MLPPAEVARRARANGVDVWALTDHDEVGGIDEARAAAAEVGLRYFTGAEISVTWAGQTVHVVGLCFDDKDCALVEGLRTT
RSGRAGRARRIGERLAALGMPGAYEGALPFAGNPELISRTHFARYLVEAGYCPDVQTVFNKYLGDDCPGHEPMQWATLAE
AVGWICGAGGRAVIAHPGRYKYSPLQFAALFDEFLQLGGEGIEVVTGSHTAQEAVLYAGVARRYGFLASRGSDFHSVGES
KADLGRLPALPDDLTPVWHDWL
>AHV94353.1 protein TolA [Bordetella holmesii ATCC 51541]
MDGRRYARCDAAQTDSRTRAGTRAAAKPAQTQPEPQPDPEIALEAARKKREQEEKARQAAEAAKEKARLEEERRQAELKE
KQRLEQERKAAEQKAKEAADKKAKEDAAKKASAEKKAKEEAAKKAAADKALRDAFRNDILGNAGRPGGTADRNQAGGGRD
DGYGAKVRACVQPRVAFPTPPRAGSANPTAEYRVQLGGDGKVGNVTLTRSSGNAGFDRAVENGIRSCNPFPKPSTGRYEP
LIDVVYRMYD
>AHV94354.1 hypothetical protein D560_0572 [Bordetella holmesii ATCC 51541]
MVTSLLRQNEYAEFHNVPSIADFEEILEAGTPGRNTRKRRSVLRKVEE
>AHV94355.1 outer membrane assembly lipoYfiO family protein [Bordetella holmesii ATCC 51541]
MALAAVLLVSGCGSSDSKYDKTAGWSAEQLYADAKQEVAAGNWKEARDRLTAIESRYPFGTYAQQALIELAYVNWKDGEN
EQALAAIDRFQQLYPNHPGSDYVLYLKGLINFTPASAFMTNLTGQDPAERDPKGLRASYDAFNELIKRYPDSKYTPDAEK
RMTWLVNAIAMNEVHVARYYYTRGAYVAAINRAQTVITDFEGAPATEEALYIMMLSYDKLEMKQLKEDTERVLDKNFPNS
HYKTEGFKDDKSWWNPFQFR
>AHV94356.1 hypothetical protein D560_2773 [Bordetella holmesii ATCC 51541]
MENQEVLVAFAQAIQELAAKTATAESALHCLIQAQDEPTRARFGEAFNTVARGLIQPRPDRPLTGQALAQLALAVNAYLE
AAGHPPLPAPAA
>AHV94357.1 hypothetical protein D560_0681 [Bordetella holmesii ATCC 51541]
MPISIYQASVPVFVRGLNTLVALLDKAEAHAQAAGLDAAALVQAGLADDMYPLAGQIQRASDTSKFAVQRLSGVAAPSFA
DTETTLDALRTRIADTIRYIKSVAPEKFDGAEGRTITIKLGALQPSFNGTSYLFTFALP
>AHV94358.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MAGLGAILFSAKAVVVKFTYRYGIDAVTLIAFRMLFAMPFFAAVAWWESRRAARGQIATLTTRERIQICVLGLIGYYLSS
FLDFLGLRYVSASLERLILFLSPSLVVLLSAWWLKRAITRRQLWAMILSYMGVVLVFAHDLSETGGGSDVVKGSLFVFAS
ALSYSVYLICSGELVKRVGATRLVAYAMLVSCVWPA
>AHV94359.1 deoR-like helix-turn-helix domain protein [Bordetella holmesii ATCC 51541]
MPQTHASEVLSRSKLPLYLQLAAEFRRNIAQGVWLPDQQIPSLEELMAHYRVARMTLRNALGILEEEGYIRRGRGKGTFV
RSDLPGVTELQIPSNWEETVALSDLLGTESITDGKDAIASLPELGMAFGGHYAQAYRHLCRLHVKEGVPYCFSEVYLADD
LFKQHKAAFLKAAAASVIARIPGLAIRQARQKITIADAGIQSARALNLNVGDSVAEVRRYACDDTRLIYFARLEFPTKFV
KLEFDLC
>AHV94360.1 alanine-glyoxylate amino-transferase family protein [Bordetella holmesii ATCC 51541]
MSLVTPEYAFAPPFQAPYIPPIRSLMPYALRAGTISMAGGYPAQELFDVEGLSSASNQVLTRLGTCLQYSNIDGQASLRV
ELAKLSAERGLQCDPDTELAVTGGSQQSMALLARVMLQKGDNVIIESPSFPNSVQALLYTGANVHTVDSGPQGIDVDALD
ELAARVKPKMVCVVASFSNPCGATISRARRLRLLELAAKHRFLLVEDDPYGELRFSGERVPPIAALADAEQRKWAVYISS
MSKTMAPGLRIGWMVAPAEVRRRCVSAKAADDMACSAWIQEIVAQYLADGHYARHVPRIRQAYGLRCDALAEALSRELPG
RVVFSKPEGGMFFWARLNGDIDATRLLPYAIEKEVVYVPGKAFYPDESMADIYAMRMSFATMNEAKIALGIHRLAQALAA
CEANEPVSISLAA
>AHV94361.1 peptidyl-tRNA hydrolase [Bordetella holmesii ATCC 51541]
MSEPIRLIVGLGNPGPDYETTRHNAGFWLADHLADDLRASFTLEKAFMGQVAKARFEGENVLLLKPITYMNRSGQAVGAL
ARFYKLAPEQVLVLHDELDLLPGQVKMKQGGGHAGHNGLKDIQAALGTPNFWRLRIGIGHPRTLNLAQQVADFVLHPPRR
DEQLDIEKVIDRCRAIVPVLLRGDFAQATRQLHTA
>AHV94362.1 response regulator [Bordetella holmesii ATCC 51541]
MRWLLEANGYRVRAFASGETFLDEYDAAQVGVLIADVRMPGMSGLELQEQLIARNAPLPIVFITGHGDVPMAVSTMKKGA
IDFLEKPFNESDLREIVARMLEQAAQRISQHQAQKDHEAMLARLTAREQQVLERIVAGRLNKQIADDLGISIKTVEAHRA
NIMEKLEVTTVADLMKVALAKPEAHA
>AHV94363.1 cytochrome o ubiquinol oxidase, subunit I [Bordetella holmesii ATCC 51541]
MIDQPEHSSLIFGRLTWEAIPYHEPILLATFAAVALGGLVLVGGLTYFGKWNYLWREWFTSIDHKKIGIMYMILGLIMLL
RGFADAIMMRLQQAIAFGDSAGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIVPLQIGVRDVAFPFLNNFSFWMTA
GGAVLVMMSLFVGEFARTGWLAYPPLSGIAQSPDVGVDYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMPMMRMPIFTW
TALCTNVLIVAAFPVLTAVLGMLTMDRYVGTNCFTTELGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCRKRL
FGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWLFTMYRGRIQFEVPMLWTLGFMVT
FVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGGVLFGLMAGITFWFPKAFGYRLDPFWGKCSFWFWLVGFYVAFMP
LYMLGLMGVTRRINHFQDMSLQIWFQVAALGAVLIALGIASFIIQLIVSYRRRDALRDFTGDPWDGRTLEWSTSSPPPVY
NFAFTPRVHDLDAWWQMKQYGYRRPQGEFIPIHMPKNTWAGIVLAAISVFLGFCLIWHMWPLAVLAFAALIVVCIVHTFD
YRRDYYVPAEEVLSTETARTRLLESHV
>AHV94364.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV94365.1 dihydrouridine synthase family protein [Bordetella holmesii ATCC 51541]
MIDVTDRHCRFFHRLLAPHARLYTEMITTGALLHGNVERHLDFDDAEHPVALQLGGSEPAALAAAARLGQQWGYDEINLN
CGCPSERVQRGAFGACLMAEPDLVADCIKAMQDAVGIPVTVKHRLGLDYDDSYAFVRDFVGKLHATGCRVFVVHARNAVL
KGLSPKDNREIPPLRYDVAEQLRRDFPDCVIVLNGGLADAGQAVQAFARFDGVMLGRAAWHTPRVLSEVSLRLWPSTRLP
SDAQVVDAMVEYTARQIARGVPLRVMLRPMLGLVNNQSGARSWRRLLSDPGRLAQNDPGLIYEAWRNLQAAARPPVDADQ
PAV
>AHV94366.1 ribonuclease PH [Bordetella holmesii ATCC 51541]
MTSPDTFARPDGRAVDALRPFHLQRGFTRYAEGSVLVVAGNTQVLCTASVLDKVPPFLKGKGEGWVTAEYGMLPRATHTR
GDREAARGKQSGRTQEIQRLIGRSLRAVVDLKLLGERTLHLDCDVLQADGGTRCASITGAWVATADAVALLIERGQLTQN
PIRDHVAAVSVGLVGGRAVLDLNYEEDSACEADVNVVMTGAGAFVEVQGTGEEATFTRAQLDTMLGLAEGGVAQLVMAQR
AARS
>AHV94367.1 his Kinase A domain protein [Bordetella holmesii ATCC 51541]
MGTIVTLSDISEIRQAERQREETLRFISHDMRAPQNSILALVAMHENDTGNPDQAATLQRIAQLSRRTLDLVDGFVQLTR
AESMKIHLCSLDMADLLREVCDDFWAPSRERGITIELREPLAPAFVMADQALLRRAMANLLDNAIKYSPRDSHIVCDIQH
HATDWVMSVADQGPGIAADQQALVFQPFVRVAQAAHADAGGAGLGLAFVRTVAERHHGQAVVRSAPGQGSIFILRLPRQE
V
>AHV94368.1 ankyrin repeat family protein [Bordetella holmesii ATCC 51541]
MGVRIKMSALAATALLALTLAGHPVSAQQVEVPQNWWFYVHNDRPAELKGLLAQGADPNVRFKNGQPAIMRAVVDGAWGV
FDVLAADPRTDVNIENPAGETPLMYLALAGQTERARKLIARGAQVNRLGWTPLHYAASKGQVATAKMLLTKGAMVNAPSS
EGRTPLMMAGYSGNRDMVQVLLDAGADPTTQDLKGQTAADWALEGKWGTLSQELQRIAEKAWQAREAQRGSPAAGASRVA
PPMPAAPAAPTHPSPAGQVQGVSGVRLNTYE
>AHV94369.1 branched-chain amino acid transport family protein [Bordetella holmesii ATCC 51541]
MSGGLQFWVAVLAMAVITYLTRGLPFMLSARNRLLRKLTEEGSRLSALGPALLAAIAAAVIVPDLWGEQRVADLAPYMAG
LAATALTARLAGNSGVAVIAGLLVYGGVLAGLG
>AHV94370.1 flagellar hook-length control FliK family protein [Bordetella holmesii ATCC 51541]
MRGAGVLATARTHLQIQQAVAAVLPPALGTLCVVAKLENQRLQLAVPGPAHAAKLRQMAPRIAQALSSQGWNLNEISVRI
QAGMPRPGQRAPRPPKEAVPLGDTALKAFEDLQQQLTPGPLADAVTRLLRHHKAKG
>AHV94371.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MLSFFGTRKAEFFHLNRFESIEQLQAGIRQYIRYYNHDRIKLKLKGLSPVQYRTQAFGL
>AHV94372.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MATPAHDTLFGNLNRPENLADEIAQQIRQKILSQAFEPGQRLPTEFDLAQRFGVSRNVVREAIARLKLSGYVETRRGVGS
FVAAGGQTSFEILPEDLLRVDALEQIYQLRVEIEAGAAALAAQHRSEQQLEVLRGALAQVDAAGDNWRQGADRALDFHMA
VCQASNNPYFVRLLSLFGRAIGDAVRTLRYGSTGTDRISEVEQEHHRIFDAIAARDSEGARAAMREHLRNGMLRRQAQLR
ARSED
>AHV94373.1 methionyl-tRNA formyltransferase [Bordetella holmesii ATCC 51541]
MRLVFAGTPDFARQALQALLAAGHDIALVLTQPDRPAGRGLKLTPSPVKEAALDAGIEVAQPRSLRLDGRYPDEARAAQQ
RLRDIAPEVMVVAAYGLILPRWTLDLPARGCLNIHASLLPRWRGAAPIQRAIEAGDDRTGVTIMQMDEGLDTGDMLLERI
VPIGAQTSAAVLHDELADAGAAAIVEALAQLDDLRPRKQPAEGVTYAAKLEKAEAALDFEQSAKTLERRIRAFNPVPGAS
LRLPGLAEPVKVWRAQALDEQTCAAPGTVVRATQQGIDLATGHGVLRLLELQKAGGKRQEVDVFVRGWQPSQAGA
>AHV94374.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MAVALSLALASGLPAANAQATATQTQAARFTIPAGPLAPALRALASSANILLSFTEDQTRGKTTPGIQGSYTPDAALAAL
LAGSNLQAVQQDNGGYLLRALPSTTLPAVRVTGIIADDANTEGSGSYAATSATIGKIPVALREIPASVSVLTRQRMDDQN
VTTIQQGLRYVTGVESIDYGDGTAYFRARGNQMGIEFDGVSIMNGLQYQQQFDMAMYDRVEVMRGPAGVTDDAIGQPGGT
VNLVRKRPMDEFHLSGETQVGTFGSVRQMFDVTGPLNNEGTLRGRAVMAGNNSLQSTDDTRNKNGMLYAALDYDVSPQTT
LSLSAGYQVTSIKGLDYGAPGVVNASGTALIGGLSGSPSENYSPDWNRSHVAIKEVNANLTHRFDNGWNWDTTTFYRSGS
LSAKYAYSSPGATQQGLSEFGDQRQSSETEWFGFDSHVSGPLQAFGRTHTFTAGVNYSQMHSTQKYGFESVYGPYAGGAF
SLYDPNAVPEVSVPFTSGNKDRLQQYSIYTQARLKLADPLTLVLGAREAFLDERSQPILPTTGDWETVAKVNHRFLPSAG
FVWDVTPATTAYASFSRFMSAQTSTTYTGAMLPPRTGEQYEVGVKNSFFDNRLSTTVALFRINDNNRAVEDPNHPIGSIP
GGKARNQGVEFEVAGQPTPNWNVYAGYTYLNVKFDNDAPDLTDGTDPKHLFKLWTNYRISEGALRDVTVGGGMLTQSSTY
RGVTQGGYAIFNAQVGWRINPHIDVSLQLNNIFDRSYYIRPPSTFFSVYGDGRNAMLTLRYRM
>AHV94375.1 putative exported protein [Bordetella holmesii ATCC 51541]
MARWISALVLASIAPITHAGVCDAKFMHDGGQLQFSGSGNINLGADLAFSDVSRSNGDNCRARVQGVASFAYAGLPSGKS
KLDYLMTVKGGQASFARYEQAGEAPARDGQFDLRILGLFAYDKVTGQGQKFAGSSYRINIGKEAPVGGQPSTTVRIGEKT
VGARRSIATALGEQSYWPITYTRNSDPTMATFKGLTLPIPGMNTTVTDWYCPAVNLVMKQEIDMAGSKSQVEITEIK
>AHV94376.1 DNA topoisomerase III family protein [Bordetella holmesii ATCC 51541]
MNKTLIIAEKPSVALDISRALGGFAREGDYFESERYVLASSIGHLLSLVAPNDPVKGKWSFTHLPVIPPAFELGPTDKKS
AERLKLLVRLAKRKDVDAIINACDAGREGELIFRYIIQYAGVKKPIQRLWLQSMTQAAIREAFENLRDDVQLKPLEAAAR
SRAEADWLVGINGTRAMTAFNSKDGGFFKTPVGRVQTPTLAIVAERENRIRSFVSRDYWEVHATFVAAAGLYEGRWIDPD
FKKDERDPEKRESRLWSQAAAQSVVAACRAQSGQVTEESKPSTQMSPALYDLTSLQREANGRFGFSAKTTLALAQTLYER
HKALTYPRTDSRYLPEDYLNTVRQTMRALAEGGSHAVGGLSRHAGTVVSNDWVKPNRRIFDNKKVSDHFAIIPTLQIPHD
LSEAEGKIYDLVLKRFLAVFFPAAEYRVTTRLTQVQGHRFKTDGKVLVSPGWLAVYGKEAQGEDANLVPVADGETVRTEE
VRAEALATKPPARYNEATLLSAMEGAGKLVDDEELREAMSERGLGTPATRAAIIEGLLNESYLRREGRELVPTAKARQLM
TLLSGLDVTELTSPELTGEWEHKLKQIEQGGLNREAFMREIAQMTQVIVKRAKEYERDTVPGDYATLQTPCPKCGGVVKE
NYRRFACTQCDFSISKHPGGRTFELPEVEELLAKREIGPLQGFISKMGRPFAAILRISDEYKLEFDFGQNDEDDNEPVDF
SGHTPVGACPKCSARVFEHGMSYVCEKSVGPQKTCDFRSGKVILQQEISREQMSKLLADGRSDLLDGFVSSRTNRKFKAF
LVRQPDGKIGFEFEPRGDKPARGAAKTAGKTAAKTATKTATKTAAKTAAKKAPAKKTAVKKTATKTAVKKAAAKKTAG
>AHV94377.1 fecR family protein [Bordetella holmesii ATCC 51541]
MACGQPISEATADAAAQWLTVLMSGEATTQERQRWQQWRAASPEHERAWQHIEAVTGRRLPLIQAGAAYQTLSPYNGATA
RARRKTLRLLLWGGLIGGSSLLATRSQTWQNLTADYRSAIGQQRTIALADGTEIVLNTASAIDVRFDSQLRLIRLVAGQA
LFTTGHRLVGGKPDSRPFIVQTAQGRVRALGTRFMVRQEDDRSAVAVLESAVEISPQQASERRLDAGESVFFTRHGVDVP
VALADKELAWTHGQIIAEDLPLADFLAELSRYRPGLLRCDPAVAHLRLSGVFPLQDTDTILDMLPKFLPVRISQRTRYWI
VVQAQS
>AHV94378.1 hypothetical protein D560_0107 [Bordetella holmesii ATCC 51541]
MADARNARMVILEDGASTEEFKKATAILEQSALVRTLNRTRNWTELFTG
>AHV94379.1 segregation and condensation protein B [Bordetella holmesii ATCC 51541]
MLETALLCASQPMQLTEMHRLFGEDPEMTNAMLRGWLETLQEQWQERGMELAHLASGWRFQSRPSMQRYLERLNPERPPK
YSRAVLETLAIVAWRQPVTRGDIEDIRGVTVSSQIVKALEDRGWIEVIGHRDAPGRPALFGTTRQFLDDLGLRALDELPP
LESSQAAAALAGLDLGGTEIQLEEIVAVTSGPVPGTLQLGDETMNADVTVRDGVESHIASESAAEFAAPEASLPEPVDTF
ADPDAGHPATPEVPVEVPVPEHDRIQPPAEPDETAPPSVPEVEPVQPEPEIAPPQPATPEVPEVPQRSQDQDDNGLAPGK
PEPV
>AHV94380.1 periplasmic solute binding family protein [Bordetella holmesii ATCC 51541]
MIAALSILPAAAVLAAPLKVVTSFSILQDMTREIGGPDVEVQTLVGADGDAHGFEPSAADSRKLAGAGLLVVNGLGFEPW
LDRLVQASGFKGQQVIASEGVKPRAFAQAAGGDHDDDHDHDHDHDHDHDHDHDHDHDHDHGHAHSHGHDHGTQDPHAWQD
LRNGMIYARNIGRALAQTDPSHAERYRQRTDAYVAKLQALQSKAVQTFAAIPEARRKVVSTHDAFGYFGDAYGVRFVPVF
GLSTMSEPSAAGFAAVIERVKQEQVPAIFIENIGNSRLAEQIARESGARLGGTLYSDALAKPGQPGATYLGMFEWNVQQL
AAALRP
>AHV94381.1 DNA-binding response regulator [Bordetella holmesii ATCC 51541]
MRVLVIEDDTTLGHALQEFLSDQGYAVDWLTEGDKVQGALAGQPYDLLLLDLNLPGQSGLEVLRQLRQEGSQVPVLILTA
RDGLDDRVAGLDAGADDYVTKPFDLPELAARVRALGRRRTGQAQPLIEVGPLVFDTVGREVRANGQRLALSVRELSVLEM
LMARVGRVVTKRQIVNSLSAWDADFSENAVEVYVYRLRKRLEGTGASIQTVRGFGYMLDVEAA
>AHV94382.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MHLTVETILQGEGWDKGWQTILRMSGNSSAVTERSFGVPDGVNNGQFGAGPVIDFFGLSSKYSKFPVEFVYPSETSIVPA
NIALIDGAKNAEEGKKFIAFTLSQAGQELLLEPKISRLPVLPYADMKGKIPPGYPDPAEIARRSKVHFDADLSQTRYYVV
QSLYDQTITFRLKELQAATKAIYEAEAKLGERAGQGKAAELLAQARKLTWSQVVDGKTVADPEFLKLFAGNKKDAAVNQK
LTQLEGEWNSKARANYEQAVKVAREAAAL
>AHV94383.1 phosphoglucosamine mutase [Bordetella holmesii ATCC 51541]
MSQRKYFGTDGVRGEVGGPVINAAFALRLGYAAGRVLVRRNANRVGGRPQVLIGKDTRISGYMLESALEAGLSAAGIDVL
LAGPIPTPGVAYLTRTLRLVAGIVISASHNPYQDNGIKFFSAEGTKLPDDVEAEIEAALDEELGCVRSEELGRARRMSDS
QGRYIEFCKSTVPSTLDLRGMKLVIDAANGAAYNIAPHVFREVGAEVHAIGVSPDGFNINKGVGALHPESLAAEVKARGA
HYGIALDGDADRLQMVDASGRIYNGDELLYAIVRDRMQRGKVEGVVGTLMTNYGFELAMGRLGVAFERANVGDRYVLEQL
LARGWKYGGESSGHLLCLDCHTTGDGTIAALQVLGALQANKTALADWVTDLRMYPQVMINVPLKPGMDWKTHAGLAAARE
AVEAELAGRGRVLIRASGTEPKLRLMVEAQDEALAQASAEKLAASLA
>AHV94384.1 tol-pal system protein YbgF [Bordetella holmesii ATCC 51541]
MRDRVLSLRSLTLAASLALATLAAPAHAFSDDEARRAILELRQQLQQQNEQNSRARLQLADQLQSLQQEIAQLRDQLELV
SRQQPSSSQTQGQQHPGNPQGVEVGDPQEQTAFDGATDLYRKGQYKEAAESLAAFTALYPNSQLAPTAQFYLGSARYASR
DYKGAIEQLSSLLQKSPDNARAPDALLVIAGSQIELNNRAGAKTTLQRIVRDYPNSPAANTAKSRLQLL
>AHV94385.1 transglycosylase associated family protein [Bordetella holmesii ATCC 51541]
MSIIIMIIVGFVVGLIARALMPGDQSMGIIMTTILGIVGSVVAGYLGQSLGWYAPGEPAGWIASVVGAIIVLFVVGLIAR
KRA
>AHV94386.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MPVNHVLTRKRVIRARDLAGQPFVSFGADSQTHQLVQHAFDTAGLPLNVVLDTNTAPTVCEFVAAGLGVSLIHPLFAEGM
QSRLVLRRFDPELHFHFQLCRAQASRNAALVEDFVQDVRDVAAHVSREVLKGQ
>AHV94387.1 sigma-70, region 4 family protein [Bordetella holmesii ATCC 51541]
MRFGIEMSTDQTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRADKLKSFLEGQ
>AHV94388.1 hypothetical protein D560_3785 [Bordetella holmesii ATCC 51541]
MFYPAGLPHARELAFASRQVSAIEVNGTFYGSQKPATFAAWANEVPAGFKLALKAPRYATQRRDLGQAGESIRRFMESGI
DRLGDTLGPLLWQLPPGKVYERQEILEFLALLPAQVSGRALRHVLDVRHPSFDCEDYLRLARARGVATVLTDNPRFVAIT
DSTCKDLIYIRLMAADPRLRRGYAPAVLDAWVECARQWAAGQSPDLPRRLPDIGGGIAREVYVFFINGHKPLAPAAAVDF
LRRLDRP
>AHV94389.1 dodecin family protein [Bordetella holmesii ATCC 51541]
MSKKAHVYKQIELVGSSSVSTDDAIKQAIERASRSLRHLDWFEVTEVRGHIKDGKVEHWQVGLKLGLRLEDE
>AHV94390.1 D-galactarate dehydratase/altronate hydrolase family protein [Bordetella holmesii ATCC 51541]
MKRTQVSARHLKVGLQCGGSDGFSSITANPALGAAMDILVRHGGTAILSETPEIYGVEQTLTCRAASREVGEKLVERIRW
WKEDYAKGRDVQINAAVSPGNNKGGLANIFEKSLGSSMKGGTTSLMEVYKYAEPVTTSGLVFMDTPGYDPCSATGQIAGG
ANLIAFTTGRGSMFGAKPVPSIKLATNTPMYSRLSEDMDINCGEILDGTMSLEEMGQRIFEELLATASGKHSKSEDLGLG
DNEFVPWQIGIMG
>AHV94391.1 istB-like ATP binding family protein [Bordetella holmesii ATCC 51541]
MNLQHNRIEQICDVLKLERIGSEWPAMAQQCAREDASHGDFLERLLGIENDARIERQRAALMKIATLPSVKTIEDYDFAF
ASGAPRAQIQELAALSFIERAENVVFLGPSGVGKSHLAQALAYRAVMAGIKTRFLTAADLMMQLATAHKQDRLQQYFNRA
IIGPRLLVIDEIGYLPFGREEANLFFNVVAQRYERTSIIVTSNLPFSQWASCFSEDQTLTAALLDRLLHHAHIVQIAGES
YRLKDKRKAGNIKIRN
>AHV94392.1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein [Bordetella holmesii ATCC 51541]
MQPWAVDVSSGVEESPGVKDASKVSAFLQAIKKVDDDLHG
>AHV94393.1 exonuclease family protein [Bordetella holmesii ATCC 51541]
MAANENRLVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVVHQDDSVLDAMDNWNKSTHGKSGLIDKVRASTL
TEAQAEQQLIEFLAQHVPAGKSPLCGNTISQDRRFMFAYMPALERFFHYRNLDVSTLKELARRWAPAVYKGFEKKSRHEA
LADIYESIDELKYYREHFLKV
>AHV94394.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MPLSPGPVYFQLFFVMAAWGVNLVAVKYLLGQMDVYVVAAVRILVAFTAVTLFILLRFGQVPRLTRAQLGWVFAAGLLVV
YAHQVSLVMGLRMTSAANATLIMATSPLFSVVLGALFYRERLTPARIVAGVLALGGVSLAVAGSGAQLAQAGLGDLLALV
AVVVFVIGGLVIQRVSRALDPLTILWYTYLAGAVALTTHAALSPATYQASSWTTDPWAWGVVFFSAVIASGACNLMWNRG
IARLGMSRAAMFVNWLPIFGLMAAAVFLDEHITLAHLAGLVCVLLGTWLGLRPAQPGAV
>AHV94395.1 hypothetical protein D560_2203 [Bordetella holmesii ATCC 51541]
MDAPRIAIHFCTQCQWLLRAAWMAQELLSTFGTDLGEVALVPGTGGVFRIDYAGQTLWDRKVDGGFPDAKTLKQRVRDRL
DPLRDLGHVDKHAAR
>AHV94396.1 pyrroline-5-carboxylate reductase [Bordetella holmesii ATCC 51541]
MENPLSIAFIGGGNMASALAVGLADKVCPAHNIHVVDINVQAHAFWLQRGMTAAAAPDAALARCRVWIFAVKPQVMRDVV
QAVQPWLEPDTLVISVAAGLRADTLAGWLGQPERPWSRLVRCMPNTPALVGQGMTGMAALDGVSAADRQLAQTLLGAVGE
VVWVADDAALDAVTALSGSGPAYVFLFIEALIAGGQAVGLSAEQARQLALGTLRGATTLASQAEDPPSVLRERVTSKGGT
TAAALAVLEQADMRSIVARAIEAAARRSEELGEEFGK
>AHV94397.1 molybdate ABC transporter, permease protein [Bordetella holmesii ATCC 51541]
MTDPVWVPLLLSLKVAGWATLISAVTGTAVGFWLARWRSPARELVDSVLTLPMVLPPTVLGYYLLVLLGRRGVLGQTLAE
WGIELVFTWQGAVIAAAVVAFPLVLKGARTAFEQVDPQLEAAARVLGLRESSVFFRVSLPLAMRGIMAGVLLAFARALGE
FGATLMVAGNLPGRTQTLSIAIYEAVQAGDDGTANLLVLITSVTCVAALLLASRLMPRRRGMA
>AHV94398.1 transcription-repair coupling factor [Bordetella holmesii ATCC 51541]
MTQVTAPGEFCLRGGLVDLFPMGSAVPYRLDLFDDEIESIRAFDVDTQRSLYPVAEVQLLPGREFPMDEAARNHFRARFR
EVFEGDPSRALPYKDIGNGIAFAGVEYYLPLFFEQTATLFDYLKTGTLTVPLGNIDDAIQRFSQDTASRYNFLKSDRERP
VLPPSALFLDGEALYGGFKDFARLALTGEPPHPDFCNAPDVAVARRAEDPVAKLRALVARPGARVLLCADSAGRRETLSQ
MLAEQGLAATEQTDEIAGFLQTPANFGLTIAPLTAGFGLTEGGLVFLTENDLYPGNAGVKRRGKRTQEGSSNVEAMVRDL
AELREGDPVVHAQHGIGRYHGLVNMDMGEGEMEFLHLEYASGATLYVPVSQLHVIARYSGADPDAAPLHQLGSGQWDKAR
KKAARQVRDTAAELLALYAQRAAREGYAFNLPLSDYEAFAEGFGFEETPDQSAAIQAVILDMTSGKPMDRLVCGDVGFGK
TEVALRAAFLAVANGKQVALLCPTTLLAEQHAQTFSDRFAEWPVRVVELSRFRSAKEVSAAIEGINDGRVDIVIGTHKIL
SKDVHFKRLGLVIIDEEHRFGVRQKETLKALRAEVDVLTLTATPIPRTLGMSLEGIRDFSVIATAPQKRLAIKTFVRRED
GSTIREALLRELKRGGQAYFLHNEVETIHNRRARLEELVPEARIGVAHGQMPERELEQVMKDFYQQRFNVLLCTTIIETG
IDVPSANTIVIHRADRFGLAQLHQLRGRVGRSHHQAYAYLLTPGEDAITSNAKKRLEAIQAMEELGSGFYLAMHDLEIRG
TGEILGDSQSGNIQEVGFSMYNEMLSEAVRALKSGEEPDLDAPFKLACEVNLHAPALLPSDYCPDVHGRLAIYKRLSHAH
DEDDLIRIQEELIDRFGKLPEPAQTLLTTHRLRLAAEPLGIVKIDVSETQALLQFGPKAVVDPLRIIELVQKQRHIKLSG
QDKLRIEITTAQVTARADAVRAVLRSLK
>AHV94399.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MRPIRSRRRAWTRLDAGLRYATEISGHTVVWRARVENLANRDYWASVGGYPGYGYLVQGAPRTFTFTASMAF
>AHV94400.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV94401.1 putative aminotransferase [Bordetella holmesii ATCC 51541]
MATTTPELANEIARKAFERGVVIETSGAHDEVLKVLPALTIEDDLLARGLDVIEASVAEALGQKQSSARVLKFGGKR
>AHV94402.1 aldo/keto reductase family protein [Bordetella holmesii ATCC 51541]
MEYRKLGRTDLSVSLIGLGTMTWGQQNTEADAHQQLDYALERGVNLVDTAEMYPVPPKAETQGRTESYIGTWLAKSGRRQ
DIVLASKVAGPVRDAKRPGHIRDGKTFLDRKNLTQALDDSLKRLQTDYLDLYQLHWPDRTTMTFGRPNYPWVDDAHTVPI
GETLEVLHDFVRAGKVRHIGVSNETPWGVAQFLKEAETRQLPRLVSIQNPYSLLNRHYELGLSEFSRFEDVGLLAYSPLA
MGMLSGKYLDGARPEGARLTLFERFTRYSNPQSEAATAEYCALARQHGLTPTQLALGWVNVQPFVTSNLIGATTLEQLKE
NIDSADVTLSPEIVKAVNAIQARWPNPAP
>AHV94403.1 coA-transferase III family protein [Bordetella holmesii ATCC 51541]
MPQGALAGCRVIDLSRVLGGPYCTQMLADHGADVLKIEPPDGDETRGWGPPFAEGVAGGSASYFAGVNRNKRGITLNLAR
PEGREFLLTLLADADVVVENFKPGTMEKWGLGYERLKTDFPRLIHCRVSGFGGDGPLGGCRATTPAPRPCAA
>AHV94404.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MQPQRIALAAALIVAFASVSAHAATEIQFWHSMEGALGDRVNALVEEFNKQNPDYQVKAVYKGNYGESMNAGIAAFRAGN
APDILQVFEVGTATMMHAKGAIKPVQQMSEEAGDPIDPKAFIGAVAGYYSSPEGKLVSMPFNSSTVVFYYNKDAFKKAGL
DPEKPPKTWEEVVAAGQKLKAAGQECGYTTSWPSWVQLETFSAWHNVPYATKDNGFGGVDARLAIDTPLHVRHLENLAKL
GKDGIFMYGGRGDEPNSLFISGKCAMITGSSGLRANIMKNAKFDFGTSTVPYYADVQGAPQNTIIGGASLWVFANKKPDV
YKGVTKFFKFLASPEVAARWHQQTGYVPVTVDAYELTKKQGFYDKNPGTDVGVKQLNVQTTAQSRGLRLGYLPQIREIED
AEIERVVSGKTTAKDGLQTIVKRGNDLLEKFEKSVK
>AHV94405.1 hypothetical protein D560_2074 [Bordetella holmesii ATCC 51541]
MTTDCGQLLPAGPFELSHRSLQAGLRAWVETQTQHPLGYVEQLYTFADSDRSNDAGARVISVSYLALTREAGDPGVAQVG
WQDWYRYFPWEDRREGTPAILADIERRLRRWAKGDARRSQRLAYGFGLDGATWNEDMVLQRYELLYEAGMVPESGAGEAV
PGQSMAHDHRRILATGIARLRAKIKYRPVVFELMPAEFTLLQLQNAVQALAGRQLHKQNFRRLMEQQDLVEETGAMSSGT
AGRPAKLFRFRSDVMLERAISGSKLPLARQY
>AHV94406.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MNQRLYRAIREAILDGTLPGDTRLPATRDLAAELSIARNTVVHVYAQLQAEGYTRSRQGNGTFVTASVPDAHLATGRSRR
HQANGPSGPVLSD
>AHV94407.1 septum site-determining protein MinD [Bordetella holmesii ATCC 51541]
MYDFVNVIQGEASLKQALIKDKHLENLFVLPASQTRDKDALTQEGVGKVIEDLKEMGFDYIICDSPAGIETGALLAAYYA
DDALAVTNPEVSSVRDSDRILGILAAKSRRAVEGDEPVKEYLLLTRYNPKRVIDGEMLSLGDIEDILRIKMIGVVPESEA
VLQASNQGLPAIHLKDTDVSEAYKDVVARYLGEERSLRFTEYEKPGFLKRLFGGK
>AHV94408.1 ATP-dependent protease HslVU, ATPase subunit [Bordetella holmesii ATCC 51541]
MTPGEIVSELDKFIIGQNRAKRAVAVALRNRWRRQQVAEPLRHEIHPKNILMIGPTGVGKTEIARRLAKLANAPFIKIEA
TKFTEVGYVGRDVDTIIRDLTEYSIKQTREIEMRRVRSHAQDAAEDRILDALVPPARNAMGEPQRDESNATRQTFRKRLR
EGSLDDLEIEIDIAQPMPQMDVMTPPGMEEMAEQLRGMFAGLSRDKTKPKKIKVKEAFKLIIDEEAGKRVNEDDLRAAAI
ANVEQNGIVFLDEIDKIAARQESGGADVSRQGVQRDLLPLVEGTTVNTRYGMVRTDHVLFIASGAFHLSRPSDLIPELQG
RFPIRVELDSLSAEDFVRILSETDASLVKQYTALLATEDVQLEFTEDGIKRLAELAFSVNERTENIGARRLYTVMEKLLE
ELSFDAAANGGQAIRIDAAYVETQLSEAAASQDLARYVL
>AHV94409.1 hypothetical protein D560_0009 [Bordetella holmesii ATCC 51541]
MGALLIFLAGAGAGAWFDRQLTIDACLDAGGRWQAQGVCVHAPQPACGG
>AHV94410.1 hypothetical protein D560_1917 [Bordetella holmesii ATCC 51541]
MAKNYESEITKFLKDYKASHPGTEEGQREGRARLWDKPQDTELLEGFRSARVPQKPYVYQAD
>AHV94411.1 hypothetical protein D560_0342 [Bordetella holmesii ATCC 51541]
MVTLGFIGAFLPVMPTTIFLIMAVGCFARSSPALEAWLLQHPKFGTPLRQWREQGAVSRKGKRFAAAGMALGYLVFLWGA
RPGWPLACAVGAGMAACAAWVVSRPTPRP
>AHV94412.1 malic enzyme, NAD binding domain protein [Bordetella holmesii ATCC 51541]
MDETFTKLALDYHAYPTPGKISVTPTKTLANQDDLSLAYSPGVAAACMAIYDQSNDAASLYTSRANLVGVITNGTAVLGL
GNIGPLAAKPVMEGKGCLFKKFAGIDVFDIELAENDPDKLVDIIAALEPTLGGVNLEDIKAPECFYIEKKLRERMKIPVF
HDDQHGTAIISSAAILNGLKVVSKDMDKVKLACSGAGAAAIACLDLLVHLGIKRENIYVVDSRGVIWEGRDENMEANKRR
YAQKTDARTLADVVKDADVFLGCSTAGVLTGDMVKTMASKPLILALANPEPEIRPEIARAARPDCIVATGRSDYPNQVNN
VLCFPFIFRGALDAGATRITEEMKLACVKAIAELAQAEQNDEVARAYAGQELSFGPEYIIPKPFDPRLIVQIAPAVAQAA
ADSGVASRPIEDIEAYRQKLMGFVYHSGQLMRPLFKQAKTAPKRVVYADGEDERVLRAVQVVVDEKLAHPILIGRPAVIE
MRIQKSGLRLIAGQNIEIVDPEDDSRFNDTWQAYYELQGRNGVTPTVAKAMIRKHNTLIAAMLLRRGDADALLCGVASKY
DNQLKYIDEVIGTKPGQTFAALNVLMLPDQTLFVADTHVNENPSAEEIANITIQAGEEMMRFGVMPKIALLSHSNFGSRP
TESSRKMAHARRLVAERARTWKSMARCMPMLRCRRKSVCRPIPTARSRVRPICW
>AHV94413.1 ferric iron reductase FhuF-like transporter family protein [Bordetella holmesii ATCC 51541]
MSRTTPPHPAEIVAHLQPEIWNKVNRLLVRKAISEYAHEWLLEPQRLGPGETPGFERFRLTLADGAQYDFDAQVMAMRHW
RIPPESIVKTVAGVPAPLDALQFVIEIRDKLGLPVDRLPIYMDEITSTLHGSAYKHGRTTLGAAALARADYQTIETSMIE
GHPSFVANNGRLGFDAEDYHGYAPEAATPVRLMWLAVHKDNAHFSCLSDMDYDSLMSEELGESAVTDFAARLREQGLHPA
DYYFMPAHPWQWFNKLSLAFAPYVAQRKIVCLGYGEEQYLAQQSIRTFFNISRPGKRYVKTSLSILNMGFMRGLSPYYMA
GTPAINEYIHDLISADPWLRANGFRILREVASMGFRNYYYEAAIDTDTPYKKMFSALWRENPLTLIAPGQNLMTMAALLH
VDPQGRALLPELIQASGLDAGTWLERYMDAYLTPLIHCFYAHDLVFMPHGENVILVIQDGVPVRAFMKDIAEESSILNPQ
VRLPQAAQRLAADVPEAYKLLTIFVDVFEGYFRHLTQILVETELMPEHDFWRLVAGRIAAYQQAHPQRLDKYRRYDLFAP
DMIHSCLNRLQLANNLQMVNLADPIGSFQMAPNLPNPIACFRPSWLGSGEALQTLTAA
>AHV94414.1 hypothetical protein D560_0645 [Bordetella holmesii ATCC 51541]
MRSLAYRQQEVAQRLRAAARRALQRHCPSLVVREIGMPSVQSCR
>AHV94415.1 peptidase Do family protein [Bordetella holmesii ATCC 51541]
MKKNDSSTLYVRRLFAALMMGAALTLAQAPLVAHAQTPVAGGVLPDFTSIVEKAEPAVVNIRTTATVPARGGPGGPGGAG
GGGDPYELFRWFFGPDFQPPGAAPGQRRQQPQPQGEERTVPRGVGSGFFISDDGYIMTNNHVISDAADIIVTLTDGREFK
AKVIGSDERTDVALIKIDAKGMTALPVGDTKKLKKGQWVLAIGSPFGLDSTVTSGIVSAIGRDTGEYLPFIQTDVAVNPG
NSGGPLLNMQGDVVGINSQIISRSGGFMGISLAIPIDEAMRVVDQLRTTGKVTRGRIGVQIGEVGKDVAEAIGLPRAEGA
LVSSVEPDGPADKAGVQPGDVILKFNDQAIKRWSDLPRVVGDTKPDATGKLKVWRKGKTVTLDVKVAELKVEQTAAAGKG
GKDAAPAVDNHLGLSVTDVPADTQKKLRIKGGVLVRAAEGAAASAGLQEGDIVLAINDVDVVNAAQFAKAVGKLDKGKTV
GLLVRRGDQSQWVAVQPSSK
>AHV94416.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MAHPQPPARPAAAQTFPALLLEHASVRPSRPAIREKDLGIWQTLSWAEVAERVRLLAHGLAALGIGPGMHIAVIGENRSR
LYIAMMAAQTLGAIPVPLYQDAVAQEMVYVLQDAQIRVVVVEDQEQVDKMLEVRAQCPALRTVVYDDPRGMRHYHDDLLQ
SYEALEDVGRQHAQEHPEFYLQAAHAVQPHDTVAMFYTSGTTGKPKGVVLTHHALIDRAQAVARMENLTDQEDVLAYLPP
AWIGQNMFSYTQLLVSGFTVNHPESPDTVSIDMRDIGPTYYFAPPRVLEGLLTHVMIRMEDAGLVKRKLFGACMNLARQV
GARILDGESVSVWDRLRYRLGDLLIYGPLRNALGMNRVRVAYTAGEAIGPDLFVFYRSIGINLKQLYGSTETSVFVCVQP
DGQVRDDTVGPPVEGVQIRVADNGEVLVKSPGLFKEYYRNPAATEEARDAEGWFRTGDAGYLDGDGQLKIIDRAKDVGKL
ADGSLFAPKYIENKLKFFPHIKEAVAFGADREHACAFINIDLEAVGNWAERRGLAYAGYTDLAGKDEVYALIRECLEKVN
ADLAADPRLAASQIHRFLILHKELDPDDDELTRTRKVRRAFIAQKYGVLIDALYSDKDRQFIETEVKFEDGRSGKISADL
RISPATTYPAITAKAA
>AHV94417.1 acetyltransferase family protein [Bordetella holmesii ATCC 51541]
MNPSLTPFILIRSSAEQDLAQIQAIYAHHVVHGTSSFELEPPSTEEIGQRRAAVLQHGLPYLVAECGGDIVGYAYATVYR
PRPAYRHTCEDSVYVRNGRHGLGIGRKLLEALIEHCTGQGWSQMLAVIGDNNPASLGLHARCGFQVAGTLRAVGFKHGKW
RDTALMQRALGAGDLTPPED
>AHV94418.1 amidohydrolase domain protein [Bordetella holmesii ATCC 51541]
MQAPTQALKQPGPPLLAELEAIDKALHPLPELPMQDLCSAAILARAMPRYGYKLLPHIGVAGVVSLMKNGTGPAGMLRAL
NACLCPAP
>AHV94419.1 MATE efflux family protein [Bordetella holmesii ATCC 51541]
MTALAPAGLGATMRSIVRQAWPVLVSQWAGIAFGVLDTTMTGHASPRDLAAMSLSASVFITVFVGLMGVIHALIPIAAQQ
YGAGRPQEVGHVWGQGVWLALGLSVVGGVLMCFPDMWLAFSGDVDPQVREGIAWYLRALVLALPSALVFRTIYALGTAVS
RPKVVMAINLTAIAFKALFNWLLIYGKFGLPALGAAGAGLATALVSWLSLAAGWWVIRHDPYFQQFQLRIGRPDPKVLKE
LLRLGLPMGGSYLVEVSAFTFMALLVAREGTLVSGGHQIMSNLAALCYMMPMALGVASAAMTAQAIGGGHHALAQRVGAA
GLVLGLLGALLTSAILLVGRPAIIAAYTDDAGVAGVAGTLLAMIPLFHLCDSMQCINSYLLRAYKVALVPLILQTVALGG
VGLIGGWWLGFGPGRGSLDALREWILPGSPQGAGTMWLMAMLGLGLSALLLHFWYRRILRRYAL
>AHV94420.1 DTW domain protein [Bordetella holmesii ATCC 51541]
MAAPPVPGGLPRLLVVPDATWRRARSMVARHPSLAALPRLTIAGAGQGRYRVRHADLPGALSTLEAVVAGLNAMESTDRF
DALLEPLERLVQGQIEAMGAARYEAHHVRREGSRSGRRDP
>AHV94421.1 HAD phosphoserine phosphatase-like hydrolase, IB family protein [Bordetella holmesii ATCC 51541]
MSTRRLALFDLDHTLLPLDSDYQWADYLARTGRAGDPEQARRRNDDLMERYNQGELTAEQAAEFMLGLLAAHSPFDLAAW
HEAFMTEVIRPALQARPMELVASHLAAGDLCVVVTATNSFVTAPIARAFGIPHLIATDAEYLNGRYTGRIEGMPSFKAGK
VLRVNQWLAAQHLTLGDFSESFFYSDSTNDIPLLEVVTRPIATNPSPSLRQTATERGWQVLDMFDHLEDHKS
>AHV94422.1 HAMP domain protein [Bordetella holmesii ATCC 51541]
MAITWATIDGVRQLVAVAYMPELRWHAVTLVDFGAARLVDPGWLWPGIIGLAALFIALVLCFGFAIERLMLRPLRRLQQS
ARAIADGSYEVSLPPGGQDEIGDLSGAFGVMAEKVRKHTAELESKVRERTSALEMANREMAAARKKIDASIDYASLIQRA
ILPDRQMTQSLGAHHFVLWKPRDVVGGDFYVFRSDGANCLLGIMDCAGHGVPGALMTMLARAAIDLAVSEAGPRDPAAIL
KRTDGAIRAMLTDAQLPRALATNTDAGLVYIDREHRRLIYSGAKISLYASNGEDAREVHGARRALGDKRIGEYENLELPL
QSGWTYYLVTDGFLDQAGGEFGFGFGNTRFAAMLKRHARRSMDEQAQAFSQVLAEYQGELPQRDDITLLSFRFD
>AHV94423.1 cytochrome c family protein [Bordetella holmesii ATCC 51541]
MKKWLAYGSLVGVALVIVAGSLAYWLGTREQAMPPAVRADSATLIERGRYLAQVGNCAGCHTARDGQPYAGGRPIATPFG
TLYGPNITPDVQTGIGNWSAEDFWRALHEGKGPGGRLLYPAFPYTEYTRMPREDVDALFAYFRTLPAVRQASRAPELDWP
YDQRALLAGWRALNFRAGELQPDPTQSIQWNRGRYLVQGPGHCAACHAPPLNSDALRGLGTWSAEDIATLLRHGTAAPSV
ATGPMAEVVRGSTQHLTESDAQAIGLYLKSLPPAVTLPASKLAPAPAVLRQGERLYVQQCASCHQDNGRGHGQAWPALAM
NSSVTAASALNVIHMVLDGGFAPATSANPRPHGMPPFGPFMDDNDIAAVVTYIRSSWGNNAGAVTPLEVKRARQDPRP
>AHV94424.1 prophage CP4-57 regulatory family protein [Bordetella holmesii ATCC 51541]
MAEITIYEMEQRDEFPRRFQLTPRCVVWDLEEVEAWIEGRKQASRSAETDISPGPDVRLRRHHPVR
>AHV94425.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQS
ALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHN
>AHV94426.1 membrane bound FAD containing D-sorbitol dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MDLTAPPTGSGVRQPSRQRRALLLGMAGLCVAAPLPGVAAMMSAPAGGTAFLALSSILTDRHHLNPLTASRIEAALAGSG
VRQAARLPELLALAASASDSAQLMHAATEAGLGDLAIDIVTAWYTGTVGQGPKAVVVAYEEALMYQPVRDGLTVPTYCNY
GPMWWTGMPPDVAVMPPEPDLIPDARGL
>AHV94427.1 hypothetical protein D560_0848 [Bordetella holmesii ATCC 51541]
MQAHGGLRTHRLGASLTDTEFQVTVAAGNWFAAELADPGGFALVGCTVAPGFEFSEFELADTAALLRAYSSHEALIRRLG
AKT
>AHV94428.1 ku protein [Bordetella holmesii ATCC 51541]
MARTLWKGAISFGLVHIPVAVHAAIRSARLDFDWIDKRDDAPVGYQRINKRTGKVITAEHIVRGYEYEKGDYVYLSDDDF
RRADDVATQTISILGFVRAAEVPLYFYDTSYYLEPDKRGGPGYVLLRDALLKSGRLALAQVVLHTRQHLAALLPQGDALM
MVTMRYADEIRDAPDMELPSKRAAARETDMALRLIDDMSLQWDPEQYRDAYREDLLAVIESKVKAGKTHSLSQADEPAAP
PRSAKVLDLMAMLKQSIDQGKRTPAAARKTATKATTAPRKTPKKAAKKTASKTAAAKTVKKATARKTATRSTRRKVA
>AHV94429.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MSGACAGGPDPGGLPAFLFVCCVQILDLAVLLHPLTF
>AHV94430.1 3-dehydroquinate dehydratase, type II [Bordetella holmesii ATCC 51541]
MARRILVLHGPNLNLLGSREPEIYGSLTLAQINEGLESVATELGVTLSALQSNHEGALVDRIQAAARDGTDFIIINAAAY
THTSVAVRDALAAVAIPFIEVHLSNLYKRESFRHHSYLSDIAIGLISGLGANGYEAALRYAARH
>AHV94431.1 putative membrane associated protein [Bordetella holmesii ATCC 51541]
MNQQDLVDRLVGIDADDALYTVRHQREKVVAATQGSLEALFDPALPGLSLVERLAVAVHACRLTPSPELADYYQQRLVAE
KADPAVLDALAQGAPQAAGVPRLDAMLEFTRKLIQNPVEGDRAALEALPAAGLSTSEVVTLSQLIAFLSYQVRLVAGLKA
MKSLEHAA
>AHV94432.1 dihydroorotate dehydrogenase [Bordetella holmesii ATCC 51541]
MSILFNAYPLARPALFAMDAETAHEVTLAGLQRAYDCGATRRWLNDQPRLPTTLMGMTLRNPVGLAAGLDKNGAHIDALG
NLGFGFVEVGTVTPRAQPGNPKPRMFRLPQANALINRLGFNNQGLDAFLANVQRSQFRSEGGILGLNIGKNADTPIERAA
DDYLIGLAGIYPHADYVTVNISSPNTKNLRTLQGGDELSELLAALRDKRIELAQQHQRQVPLVVKIAPDLTHEQIDVIAD
ALLAHGVDGVIATNTTLSRDAVQGMAHASEAGGLSGAPVHELSLAVIARLRQRVGSALAIIGVGGIVSGQQAREKIAAGA
DAIQLYTGLIYRGPGLVGECVGTLKNAGPKR
>AHV94433.1 DNA-directed RNA polymerase, alpha subunit [Bordetella holmesii ATCC 51541]
MSTQGFLKPRSIEVEPVGPNHAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQMTGVVHEYSTIPGVREDVVDIL
LNLKGVVFKLHNRDEVTLILRKNGAGQVLASDIELPHDVEIVNPDHPICNLTDAGKLEMQIKVEKGRGYVPGNVRALSED
RTHTIGRIVLDASYSPVRRVSYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGAGDSYEV
PVRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLAARGLTLGMKLENW
PPLGLERP
>AHV94434.1 DNA polymerase III, delta' subunit [Bordetella holmesii ATCC 51541]
MSQAQFAPWHLETARAWLGQRERFAHAWLIHGTAGIGKLDFAAAAAASLLCEAPQHGLACGACPACAWVASGNHPDLRRV
RPDALAVEEGAEAADIADDGGESAPASGSKKAPSKEIRIDQIRALESWFNTATHRGGWRVALIYPAQALNTVAANALLKV
LEEPPAHTVFLIVADAPDRLLPTLVSRCRRLPLATPDGATALAWLQAQGVDPAADWLAAAGGAPLAARRLAAQSDSPVPA
WLRSLVESLAAGRATDVGTLAETLEKLTAAEWLDTLQRFFTDLSLAAHGAALRYFPSLAQAVGTVAARAQPAQLAETGRW
LTRQRGLAGHPLNAKLFAHAALQRVVLSCQS
>AHV94435.1 putative D-alanine-D-alanyl carrier ligase domain protein [Bordetella holmesii ATCC 51541]
MRFDLSTFEFVASERDPQALAVVGADGQLSWAELEQAAAAWVERARARNITADVPVVVYGHKQTGFSWPWSAH
>AHV94436.1 hypothetical protein D560_2197 [Bordetella holmesii ATCC 51541]
MDLPSEPDLTPEQCTRVRHSFDRQGLMRHLGATLTEVGHGCVRIRMPFRPELTQQHGYFHAGATSAIADTAGGYAGYTLF
PEGSSVLTIEFKINLVAPARGDCLEAVGKVLRHGRSLTICQMEVFGVQDGVSTLVAVGQQTLMCMHGKPDEGQSSPSQ
>AHV94437.1 acriflavine resistance protein A [Bordetella holmesii ATCC 51541]
MAAIALALSGCGKEQAAPQAGKPQVGVVTLKTQPVSLSTELPGRTSAFRVAEVRPQVNGIVQKRLFTEGGDVRAGQQLYQ
IDPSVYQATYDSAKAALARAQAQQRTAALLVDRYKPLVETRAVSRQTYDDAVSSRDQAAADVLSAKAALETARINLVYTK
VLAPIDGIIGRSQVTEGALVTANQTGAIASVQQIDPIYVDVTQSSVQLLKLKRALATGQLQQADGAQAAKVTLMLEDGSV
YDAPGKLEFSEVTVDPTTGSVTLRALFPNAKHELLPGMFVRARLAQGVAADGLLVPQRGVARSQRGLPTALVVNGENKVE
LRELVTDRALGDQWLVTKGLAAGDRVIVEGLQSVRPGVEVTAQEYQAGASAPAGQGGQAPAAK
>AHV94438.1 hypothetical protein D560_3888 [Bordetella holmesii ATCC 51541]
MSDRGVMVSLRVDEDQSGPGAARGVREMSAARMAQSQ
>AHV94439.1 tonB-dependent siderophore receptor family protein [Bordetella holmesii ATCC 51541]
MNRNRTCKTARLAPLPALISTVFSGLLCSAALAWVPPTAQAQSAPSAQDTDVAFAIEAGPLDQALNQFARTAGVNVSFDA
SQLAGLQSRGLQGRYGASSGLRALLAGSGFEGVRLPSGGYAVRRLPAGAATMLEPVSVTGQEYRLRSEGTGSYTTPAVTI
GRGEQRLRDIPQSVSVVTRQRLDEQNLTSVYDALENTTGVTLQQSPQGGKYIYSRGFDNSIIQYDGVPLERNMYGRASNY
SGGTAFYDRLEVLRGAAGLLQGSGSPGGAVNLVRKRPLEEDRLAIETKAGSWDRYGLQLDGSKILNEDGSLRGRAVIDRQ
DNHSFVDRVDLLNTTVYGTLEYDITPRTQVNVGYSHEELSGRPSISGLPRYSTGEEVDFKRSTSYAADWNHQKTTNQGFY
ADLTHAFNDDWRAKITGAYVQENQRLKYTASSRAVNPTTQMGTVSAARTVADIDTSGLDANLTGKFRAFGRTHEVVLGTN
YGHSKIDTSYAYLVNYATFNAFRFDPDLPEPSTAALRAGTDEVRDGSNRQLGFYGTTRLQLADPLKLVLGTRYSRSKRIW
TTDTTTAGKLTNGQKRQANDHVTPYAGLILDLTPQWTTYVSYTDIFQPQSEVNASGQSLKPIVGDSYELGLKGELLDGRL
NTAFAIFRIDQNHRAQVDYNTSPTCSADYYCYTDAGKVRSQGFDAEVNGELLPGWNLYAGYTFNTTKYLKDQDSEGKAFA
WYTPKHIFRLWTTYQLPGDWSALTVGGGVNVQSSQSRQIGATTVQASGRAVWNAYSKYQINRNWSAALNINNIFNKTYYS
AVGNLVNGIHYGEPRNVMLTLRGTY
>AHV94440.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MPHTLLTRRALLLATLLTSLGSQAFAAEQTWPQRPIRMVVAGSPGAGGDIFARLISTPLAQALKQPVVVETKPGANGMIA
ADNVVRSANDGYTLLFAPSSTILLNPVVLPSLPYDTEKDLIPVAQVGAAGILLVANPSTGFKNLADMVAYAKANPGKLAY
GSWGTGSSGHLAMEGIKARYGLDMPHVPYKQLVTESTDLIANNISVGFMDIASPIPHMRAGKLVALGQTGSRRWPASMDV
PTLAEQGYTFEADGWYGVFAPAGTPPEIIERLNAEIYRAQHNPEVQEKIEGQNMIVPADATAQEFSASIKRDATIWQDLA
KLSDLKNK
>AHV94441.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MVAIVDLSHGAAHDACSLSDLLDYDLIGLESNTALMALLEREARSLEKTVRLRTQVKSFYVLARLVEARLGVGFMPLDAA
TSFAKDMQIRIIHLTDSWAIRQLHLCVQTVPLLPAHTANLVEVLGSYREQPSGV
>AHV94442.1 transcriptional regulator LrhA [Bordetella holmesii ATCC 51541]
MRTLDLDLLRTLVAIVEHDSFSAAADNLHKTQSAITQQMQRLEQLIELPLFEKRGRHKRLSAHGEKLVIYARHMLALNDE
ALRALQDSLLEGALRLGSPHDVADSILPSLLTHVARTFPRVKLEIRVDRSPNLMTALRHGELDLTVSTRFDPALEGVVLR
TSPTVWLCSADYVHDHHAPVPLVLADEPSIFRRLALNALEQSQVRWQTNYVAPNLVGIKAALRAGLGVTARSVELLGPDM
RVLGEKEGLPPLPDVNYFLWIRRDLINPLTRHVYDMLKTQLRLSAEETTD
>AHV94443.1 amidophosphoribosyltransferase [Bordetella holmesii ATCC 51541]
MCGIVGVIGRGPVNQLLYDSLLLLQHRGQDASGIATMHGNQFNMYKAHGLVRDVFRTRNMRALPGTSGVGQVRYPTAGSS
ASEEEAQPFYVNAPFGIMFAHNGNLTNWRELRESLYRVDRRHINTNSDSEVLLNVLAHELQSAASGVSLDDDAIFRAVSA
LHRRVRGAYAVVAQISGYGMLAFRDPHGIRPLCIGRQETDEGVEWMVASESVALEGSGFSFVRDVQPGEAIFVDLDGRMA
SRQCAENAELVPCIFEYVYFARPDSMIDGVSVYDARLRMGEYLADKVARNMRLGDIDVVMPIPDSSRPAAMQLAARLNLD
YREGLIKNRYVGRTFIMPGQAVRRKSVRQKLNAIGMEFKGKNVLLVDDSIVRGTTSREIVDMARAAGANKVYFASAAPPV
RFPNVYGIDMPTQKELIATGRSDEEIARAIGTDSLVYQDLHDMQQAVRDINPALKRFEASCFDGEYITGDITAEYLARLG
QSRETSAGEDLAGGLQFNMGYAANDV
>AHV94444.1 3-deoxy-7-phosphoheptulonate synthase [Bordetella holmesii ATCC 51541]
MTRIDDAMHDREAGQADSTQDTTRIDGTRIGAVRPLISPALLLDELPTPAAVQDLVESSRRDIADVLHGRDDRLIVVVGP
CSIHDHDQAIAYARQLKTAAEALGDDLLIVMRVYFEKPRTTVGWKGFINDPRLDGSFRINEGLRRARALLLEISSLGLPI
ATEFLDLLSPQFIADLIAWGAIGARTTESPSHRQLASGLSCPLGFKNGTDGGVQIAADAMVAASASHAFMSMTKMGVAAI
FETRGNADTHVILRGGKNGSNFDQASVQACCDVLRKAGLREQVMIDCSHANSNKSHDRQIDVARDIAQRVAGGERRITGL
MIESNLQPGRQDLKPGVPLAHGVSITDACLGWTQTLPVLDDLARAVRQRRTR
>AHV94445.1 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Bordetella holmesii ATCC 51541]
MPLALAVLLAGCAVGPDYKRPEIDVGVSFKEGQQTVPGWRQAQPADGVVRGQWWSIYGDPVLDGLMQRLNQANQTIAQAE
ANYRQAQALVGTARAGFFPTVGASSGLTRSGGGSSSSATTVGNQYALSGSVSWEPDLWGRVRRELESSRASETASAADLA
STRLSAQAALAQNYLQVRVLDEQKRLLQATVQAYERSLTLTRNRYEAGVAGKADVAVAQTQLESTRAQSLDLDWQRGQYE
NAIAVLIGTAPSQFSLAVAPFTQQLPQIPVGLPAALLQRRPDVAAAERRAAAANAEIGVATAAWFPDLTLSASGGFRSGQ
FADWLTAPARFWSLGPALALTIFDGGAREAQIASARASYDAQAAAYRLSVLTALREVEDYLVQLRVMEQEQQVQRRALES
ARESMRLTRNQYEAGLVDYLSVAVVEATALSSERNAISLLGNRLIASVQLVAALGGGWDGLTPTESGPPGRP
>AHV94446.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV94447.1 outer membrane efflux family protein [Bordetella holmesii ATCC 51541]
MKGRCHMQMPPRSERGGWVTLGRRGLVLGLCCLAPAISMASRDWTLPALLLAAETTHPSVAGRRADEAAAQANRDAAGWQ
RFPTPSVEIGSRSLSNGNSGNANGSTRAIRLDQPLWTGGRIDAGIDAADERVQAAASAISETQLELRLRVANAASEAMRQ
QERIRVAQGHVVQLDRLLEMIRRRVAQEVSATADLNLAQSRMLTSVNDVNTARQSLRIALVQLEQLVGEPVARVIGSAAD
ETGVSDRDALLERTLALSPRLKRLPSELRQAEAVVRERRAVLSPAVLLRLENVQGAALVGSGTGSTNRALVVMQWQTGAG
LSAVSAVSEARSQVESVRMLREAARREVSQQFETDWAQWTDAKLRLDIARRVEVTAAEVADSYSRQYVAGRKSWLDMMNS
VREVEQAELASVDVRYEGQAAALRLRLQSGSLQ
>AHV94448.1 peptidase M48 family protein [Bordetella holmesii ATCC 51541]
MGAASSADLSPALERQLGEAIMAQGRRDPTYVNDPELAQYLTTMGRKLASHSPGGIPEVEMFGVRDPEINAFAMPGGFIG
VNTGLIVSSSSESELAAVLAHEIGHVTQRHIARGMTQQNQSSVVMMASLAAALLAALAGGGGTWPWGWRHSDRPLRSIGN
WVFRGTPNVRRIGPACRCSRAPAMTRPACRACSSG
>AHV94449.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Bordetella holmesii ATCC 51541]
MPEKKGSADAKVLHCSFCNKSQHEVRKLIAGPSVFICDECIDLCNDIIREEAQATARAAIRSELPTPVEIKSFLDQYVIG
QTGPKRMLAVAVYNHYKRIRHGEIKGDEVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVE
NIIQKLLQNCNYDVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQDFVQVD
TTNILFIVGGAFDGLEKVIRDRTEKSGIGFSASVRAKSERGVGELFSEAEPEDLVRFGLIPELVGRLPVVATLDELDEAA
LVQILTEPKNALVKQFQKLFAMEGAELDIRPDALTAIARKALKRKTGARGLRSILESALLDTMYDLPSQGNVSRAVLDGN
AIEGGGKPLLIYADEGAESAKAGQGEVRDAAA
>AHV94450.1 NADH-quinone oxidoreductase, chain I family protein [Bordetella holmesii ATCC 51541]
MEAIKDFFGSLLLTELFKGMRLTGKYFFKRKMTLRYPMEKTPTSARFRGLHALRRYPNGEERCIACKLCEAVCPALAITI
ESDQREDGTRRTTRYDIDLTKCIFCGFCEESCPVDSIVETHIHEYHGEKRGDLYFTKDMLLAVGDRYEAEIAQRRAEDAP
YR
>AHV94451.1 2-oxoglutarate dehydrogenase E1 component domain protein [Bordetella holmesii ATCC 51541]
MPDEWREYFDQLQHTPATDGQETTRDQAHAPIVESFAQRARANAFVQRSTEPDLSVASKQVSVQSLIAAYRSLGSRWADL
DPLKRQERPRSPSSIRLSMA
>AHV94452.1 PPIC-type PPIASE domain protein [Bordetella holmesii ATCC 51541]
MSDDQARQRLEQVRQRLAAGGAKFEDMARQYSQDATAPQGGDLGWVNPGEMVPSFEAAMNSLKPGEVSQPIESPFGWHLV
QVLERREKDVTDEVQRMQARQTLFERRAGPAFEDWMEQLRGQAFIDNRLEKQDRIEQNNR
>AHV94453.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MARSRRLRLAELRETPFLMFESGFALNHVLISACERVGYTPTTAARSGQIDFIVALVASGLGIGFLPRLVAEQRQQPGVR
LVELDDRDAVWEMALIWRRGGYLSHAALAWLELNRDIYPSASLK
>AHV94454.1 cupin domain protein [Bordetella holmesii ATCC 51541]
MIVRNVKDVIGTPDEVRTDTWMSRRVLLKKDNMGFSFHETTIFPGTRTHIHYKNHLEAVWCIEGDGSIETIADGKRYDLG
PGVVYALNEHDEHWLCGGKEPLRVICVFNPPLTGQEVHDADGVYALPQAEAA
>AHV94455.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MSARKRIALITNGYPHAGARERGFILPELKALIAYGHEVTLMPLRPLRQADPSLPAQVRVEQGLARLHRPWQLPLTFARA
LRTRLFWAEARRCMRHGRVAHWRHFLKESLRAAAMLRMAGRLQQFDLIYTYWFKGEATGGSLLGQTGLLRVTRAHGYDLY
EERANNQGYIPYRGSTLPLMDVVVLLSEDARAYLERRYPGVCSMTVVLPLGVEIGSCRNPAPPAGEIHLVSCSYPAVVKR
LDLVAGVAAALARRLSQARVRWTHYGATREQALLPAAFSAPDNLTMVFAGETNNEDIRCQYAQTPISFFLNMSLSEGQPV
SIMEAMAFGIPVIATAVGGVPEMLAHGGGLGVKIQ
>AHV94456.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MVVITMVWGGTFLLVQLAMQYSGALFFVGCRFAAAAVAVGVLSWRILPGMTRQDLIAGAGIGSMIALGYGLQTMGLRHIP
SSESGLLTGLYVPLVPLLQWVFWRRRPHLMCLAGAVCAFAGLSCFAGTGFSLSFSYGQLLTLAGALAIAVEIVLISHFAP
RVNLRRVTVAQLAFAALFAFMLMPVAGETTIPPFSWPLLGLAAGMGLASAAIQATMNWAQKTVEPSRAAIIYAGEPIWAA
AFGRLAGERLPPLALMGGALIVLGIIVSESRPRWLRSGPFRSRKKTPGA
>AHV94457.1 carbamoyl-phosphate synthase L chain, ATP binding domain protein [Bordetella holmesii ATCC 51541]
MGAKVSFVTPSAGVVDKRRLPPGGPVGGAERRLDIHVLGQEDGHVETGRAWERSVWRDQRVLIAECPAPRLSARMEATLR
DVASCIAVDRGWLGLGTAVFALDDQSGQFRLIEATLQGRRGKAALMEPMAAHALEVGIGACAASGRPGTSLLVWGSTRGE
ALRRAYQAIGDMPGLAVPERAFLLNRIASPAFCSGLTGMRLARIADWSDHRAAS
>AHV94458.1 hypothetical protein D560_0194 [Bordetella holmesii ATCC 51541]
MFASASIQAIKAGKQRQTRRIVKPQPPPAATLWYCDPAHAERWIAATARPDDATPAQTVSKWLVCPYGKPGDLIDLAHES
GQPFGRAILMGVRIQRLQAINEADAAAEGFAAASRLDEFLPETPPQAAFALAWGERYGARAWAANPWVWVLEFRLLNQNG
H
>AHV94459.1 hypothetical protein D560_1964 [Bordetella holmesii ATCC 51541]
MQTDRGFVLHAPVGDYSSSIKLGELALTTSRDVLQAVADGNGPARMLITLGYAGWGAGQLESEMSQNAWLSVAADPSVIF
DVPAQERYPAAMKLLGIDPIMLAGEAGHA
>AHV94460.1 hypothetical protein D560_1772 [Bordetella holmesii ATCC 51541]
MAAIKRVAASIGRGISALFAFIDEVNESMNRARAQSANYTGSQW
>AHV94461.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHN
>AHV94462.1 AMP-binding enzyme family protein [Bordetella holmesii ATCC 51541]
MQRPWLAHYPQGVPAEISIAPYASLTDLLDQACKRHADRIACTAMGSDIRFAQLDQWARSFAAWLQARGLARGSRVALMM
PNVPAYLVALLGSLRAGMVVVNVNPLYKPDELQRQLLDSGAETIVILENFAATLQAVGDRSDLKHVVVVGPGDLLGGLKA
PLVNFAARHIKKLVPSWHLEGAWPLSRVLQEGARAGFTPPELSMNDLAVLQYTGGTTGVPKGAMLTHGNLVANILQVGAV
ARPVLGDLNGPPLTMLSALPLYHVFALTVCGLFGLHAGMRNLLIINPRDQASLIAAWKRVPVNVFPGVNTLFNALVDNPG
FAGLDFSGLRLTLGGGMAVQPSVAERWLQITGHPLIEGYGLSETSPVATVNPTDSAAYSGAIGLPLPSTDVAILDDLGNE
VPLGERGEVAIRGPQVMAGYWQKPQETALVMTADGFFRSGDIGIMDERGYTRIVDRKKDMIAVSGFKVYPNEVEAVIAAY
PGVRECAVIGVPDGHSGEAVRAYVVRRDASVTEADILKWCEGKLTGYKRPRAILFRDELPKSNVGKILRRELRDEAVASR
T
>AHV94463.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MAYWEWGDPANARVLLCVHGLTRNGRDFDHLARRLAPHYRVVCPDVVGRGQSDWLTNPMYYTIAQYASDMMTLLARLRPA
RLAWVGTSMGGLIGLGLAGALGMARQAHAAQSHAGLPLPPSHELSIERMVLNDVGPRLQRVALERICENVGARAVFNTFD
EALQATKVSCATFGPHSEEHWRELADNSYVSEGGHWVKRYDPNIALALAAQANPQAYEAGEQLLWHAYDGLGCPVLVLRG
ADSDLLSAQTVQEMQQRNPRTEEVVFSGVGHAPTLMSADQVQPVADFLLRG
>AHV94464.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MQRYPHQFSGGQRQRICIARALVMEPEVLVADEAVSALDVSVQAQVLELLEDVRRRTGVGVLFITHDLRVAAQICDTIMV
MQRGQVVETGSATTVLTRPQHAYTRTLIDAAPGRDWDFRNFRPLQTAA
>AHV94465.1 fecR family protein [Bordetella holmesii ATCC 51541]
MSEAGIIPSAVVDEAIAWSVKLNFGSPDPDTCAAFERWFRAAPAHESAWARMQALNADFHAVPQGLALDTLSAMGAAHSQ
RQLRRRAILKGMLVAGGVAGTGWAVHDHTPWQSVLADVRTSVGGTDRLRLADGTLLILNTDSAVDVQMQAAERVVVLYRG
EISVDTGRDPASPSKRPFFVRTPFGAIQALGTRFVVRLGDDYAQVSVQQDAVALRPTDNTSTVVAQAGQTWQLRRQTAQQ
MSDPAMAADAWVAGAIEGKDMRLADLLAELARYRHGRITCSADIADIKVSGTYHVNDTDRALSFLAQTLPVRVRYWTRYW
VVVQPA
>AHV94466.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV94467.1 fumarylacetoacetate (FAA) hydrolase family protein [Bordetella holmesii ATCC 51541]
MSNYVIAAPEQASAAVAGSSQRFPIRRVFCVGRNYAEHAREMGHDPDREPPFFFTKPADAVVPAQGTLPYPPLTEDLHHE
IEMVVAIGKGGKDIEVDQALAHVWGYAVGLDLTRRDLQAQAKKMGRPWDWSKAFDASSPITPLRPASEIGHPQKGRIWLD
VNGSVRQQGDLAELIWSVPEVIAAISRSVALKPGDLIFTGTPAGVAALQPGDVARGGADGIGEFELTIGPKVAA
>AHV94468.1 hypothetical protein D560_1786 [Bordetella holmesii ATCC 51541]
MLKKLFLMAAFSLLAACSPRYDWRELDVAEGRVRAAFPAKVQTDSRDLVLAGHALRFSLASAQVDGAVFAVGYARLPAAL
RGRPAAGELGEALRRSLYTNLGVPPPAGGQPDGTLFEIHATDPAREAWLVGKIWVTADMLLEVVATGSRRSLSPEHAQEF
LRSAVLLP
>AHV94469.1 periplasmic binding family protein [Bordetella holmesii ATCC 51541]
MIEKFDARDTDMTSQLGKAKAAGVDTLVVWAQAAPLGHLVRSMEKIDYMPRVLTTWAASFSGFPQVAGNKLMEWPVFLTT
SSQAKSPAAKSLLERIGPKLANPSMFWAASQAYDTVLVWAAAAEQAKSLDGAAVRAAMEDLQQPVDGLVKQYQKPFTATN
HEGLQAQDYHWSRWQGGSVVDFADPVLDAMTAADFKK
>AHV94470.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLEVENLSVAYGGVQAVRDLSLQVRAGEITALLGANGAGKSSTLMAIVGAVRPKSGRVSFEGRDITGTPPQHLVAQGIAL
IPEGARVFARQSVAQNLRLGAHTVRDEAVFAERLQRVYDLFPRLKERQEQLAGTMSGGERQMLAIGRALMSGPRLLLIDE
PSLGLSPLLVEQVFDALAALNRDDGLSVLLVEQNMNQALEVASRAYVMQSGRVALQGGAEELAASDEVRQAYLGM
>AHV94471.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQDMPAPGNERRRSCLGRHHHHPRRDHRHHLQDRRRRTACGHRGPPAQDLHRRDPACQ
>AHV94472.1 hypothetical protein D560_2314 [Bordetella holmesii ATCC 51541]
MWQFEVPAGLPAGTRWPVAGPVLLMAMAGAAQPWLLAALPLVLRRPAQAVQALRVHPDPQFWQARCAGNVWRPVHLRDAV
RHQSHLALTLELHGDECVTNSKINCSVWPDTMAPHHWRRLNIVTGVGGCKVAYRKGVS
>AHV94473.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MIRLEHVGKVYHGRQGSTHAVGDVSLDIEQGEFVSIVGPSDCGKSTLLNMMAGFLPPSSGRIHVDGQLVQGKVPPRLGYI
FQKDTLLPWYTVSKNVALGLDFMGVRADEIAARVKRLLELGHLEDFAHAYPHQLSDGMRRRVALLMSLAVEPRILLLDEP
FGALDTHTKTHLHRELGEIWRSLGQTIVMVTHDLDEAITLSDRVIVLSGPPSRVLLDERIIIEHPRDVFTLRETPQFTAH
VQSLWAVLGQQFRAAA
>AHV94474.1 ribosomal protein S6 [Bordetella holmesii ATCC 51541]
MRHYEVVFIVHPDQSEQVPAMVERYQALVTGQSGSVHRLEDWGRRQLAYPIQKLVKAHYVCMNIECNQATLDELEHSFRY
NDAVLRHLVIKTKKAPAGASIMMKSVEREEARKASAEAAAVQAE
>AHV94475.1 transketolase [Bordetella holmesii ATCC 51541]
MGMAEIAQALWLGNLRHNPADPAWANRDRFVLSNGHGSMLIYALLHLTGYALSLDEVKNFRQLHSKTPGHPEVGITAGVE
TTTGPLGQGLANAVGMALAEALLAAEFNRPGHTIVDHHTYVFMGDGCLMEGISHEACSLAGTLKLSKLIGLYDDNGISID
GHVEHWFGDDTAKRFEAYGWNVIRGVDGHDVAAVDAAIKAARAQSEKPTLILCRTVIGKGAPTMAGTHNVHGAPLGNDEI
AAARTAMGWSATAFDVPQDVRQAWDCRAAGAAAQDAWQAVFAGYAEAFPTEAAEFSRRMKGELPEGFAAKSQALIAATAA
KGETVATRKASQFAITELAGLLPELLGGSADLTGSNFTDWKGVGAVRAAEQGGVHFGRHINYGVREFGMAAIMNGIALHG
GYLPFGGTFLTFSDYSRNAIRMAALMKQRVVHVFTHDSIGLGEDGPTHQSIEHASSLRLIPNLSVWRPCDTVETSVAWDY
AVMRPASIGMDVHDGGPTALLLSRQNLPFVARDEATLKAVAKGGYVLRDAPQARAAIIATGSEVAIALAAQEALAKEGIA
VRVVSMPSTDVFDRQDAAWKRAVLPAGMPRVAVEAGVTAFWHKYVGLDGAVVGIDRYGESAPAGALFKFFGLTTEKVAEA
VKQVL
>AHV94476.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MPVYEFSTLRVEQKGSVATVWLAHPPVNAVNTTLIQELTLALDMFGEDPEVRCVILTGEGRIFCAGADLKGRSKMLAEPG
GLPQHSRRTRELFHAIRECPKPVIAALNGPALGAGLGIAASCDILIAADTACLALPEVDVGLLGGVKHAQRLFGHSRLRR
MMLTGLRVSAQELYRLGIVEACVPGAELLAAAGDMAQQIASKSPTSVQLMIQTANAIEDMSLRDGYRYEQDMTAQVAKTE
DAQEARRAFLEKRPPVFTDR
>AHV94477.1 protein-L-isoaspartate O-methyltransferase [Bordetella holmesii ATCC 51541]
MRKPVDPKDGAAGYSRQGLAPGYTPANSNTRISAATLQRPQPLKPAAGPANLGLNSDRLRQAMVQRLRQQGISDERVLDA
MAIVPRHVFVDEALASRAYEDAALPIGHSQTISQPWVVARMIAAVCEGRTPTRVLEVGAGCGYQAAVLAQFVREVHAVER
IRGLYELARTNLRALKLTTRVRLIYGDGTQGVAGVAPFDAIVVAAAGLAIPQALLNQLAPGGRLIAPEGSTSQRLVLIER
TGTASWKRTELEAVRFVPLKPGIQS
>AHV94478.1 hemY family protein [Bordetella holmesii ATCC 51541]
MRTWFWTLLLACVAVAIAVVLRAHPGNVLILVWPWRFEMSLTLAVLLLVALFAALYIGLRLLAWLVAIPDRVRAWRGRRA
QARDHELLERGWISLLEGRFSHAEKDLVKLLEQTKVSGRRVLAALSAARAEHGLGEFARRDQMLERAREEAGADAGLIKA
TATVAADMLLDQGLPAQALEVLAPLQDGGARHLHTMRLLLRAETALGHQERVFVLARGLSRRNALAKAEAEQLIDSSGAA
RLRAGIGSDQWRAVWKDLKAEERMLPSIALAGAAAFEAAGDHTEAARILESAIAVKFNPALVAAYARCDAEQVPRRLAKA
EIWLQQRPADAGFLTALGLLCLNGQLWGQAERYLQRSVARRNDAQTHALLGSLYDRLNRPSEAARHWRLATSASMALPIL
ATDAALPPADTQSDPHHLDAEGGYVEGEEMVYAASAADPALQTPAVAADYVLDPDAQQAGRAEPPAPQAIVPLRSAVDIE
EYFDSAPIPQAAFEAPVSSFQVETSVPEDKPAGKV
>AHV94479.1 enoyl-CoA hydratase EchA15 [Bordetella holmesii ATCC 51541]
MSTEATLAHYARYQAIKLRRHPEGVLELIMEAKDASGKLSTADHRLHRELADIWRDIDTDPETRVVVIRGEGKGFSGGGD
LDLVQQMADDFEVRARVWREARDLVYNIINCNKPVVSAMHGAAVGAGLVAGLLADVSIAARDARIIDGHTRLGVAAGDHA
AIVWPLLCGMAKAKYYLLLCETVSGEEAERIGLVSLCVDEPQLVERAFEVAYRLARGSQTAIRWTKYALNNWLRQAGPTF
DTSLALEFMGFSGPDVREGIQSLRERRAPDFKPDSPF
>AHV94480.1 bacterial extracellular solute-binding s, 3 family protein [Bordetella holmesii ATCC 51541]
MIKSKVAAALVGLSVTMFGSISAAAPQGKELIVATDTAFVPFEFKQGNTYTGFDVDLWAAIAKELNLKYKLQPMDFNGII
PGLQTKNIDAALAGITIRDDRKKVIDFSDPYYESGLAILVPEKTSNIKTAQDLAGKTVAVKTGTATVDFLKAQVPDAKLK
LFPNIDNAYLELATGRVDAAVHDTPNVQYYANTAGKGRVKVVGTVKSGDFYGIAFPKDSDLVAQVNKALATLKANGEYDK
IYTKWFGKAP
>AHV94481.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MADAPMPPARPVWSAPSYLMLLEMASLGFGWTELPRWMVQRFGQARLRELDVPGWPRHIKVDAVWSARRTLGPAGAWLLH
SLAGV
>AHV94482.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MRSEPELDLKTVDLDGYPLTYAEAGQGDPLVLVHGSLCDCRYWKPQLTSLARHFHVFSLSLRHYWPEDWDGSGEGFSITQ
HTADVLAFIDALAGGSAHLVGHSRGGRIAVEAALHAPARVRSLVLADPGMTRPGEDERGDFRQRALTLIQAGDPDAGLAL
FIDTVTGPDTWRRMVPWFKDMVRDNAKTVLGQAREPTVPVGDVAALSMPVLLIGGALSPPPYPAMLDRLQTLLPQAQRIA
IAGSSHGMNLGNPRAFNQAIVDFLA
>AHV94483.1 istB-like ATP binding family protein [Bordetella holmesii ATCC 51541]
MNLQHNRIEQICDVLKLERIGSEWPAMAQQCAREDASHGDFLERLLGIENDARIERQRAALMKIATLPSVKTIEDYDFAF
ASGAPRAQIQELAALSFIERAENVVFLGPSGVGKSHLAQALAYRAVMAGIKTRFLTAADLMMQLATAHKQDRLQQYFNRA
IIGPRLLVIDEIGYLPFGREEANLFFNVVAQRYERTSIIVTSNLPFSQWASCFSEDQTLTAALLDRLLHHAHIVQIAGES
YRLKDKRKAGNIKIRN
>AHV94484.1 hypothetical protein D560_1233 [Bordetella holmesii ATCC 51541]
MNPDLFQYHDLSQFPLVLTRHFGAPAGYAQIWIKEMEQLVSSPEPFVLVTQDLGTPISHDDRKKMVQWQTENMPRIRQAS
RGYIAVKPDISGYERACKQAEKMTRAFDFPFVVVNSMVEARAAARRLMAGLA
>AHV94485.1 BFD-like [2Fe-2S] binding domain protein [Bordetella holmesii ATCC 51541]
MGYAPGLPGTGAFGMGPDQPRGVYVAGDAAGIGGALAACVRGELVALGVAQQAGRLSAQAAEQAGAPLRARLHGLLRMRP
MLDEMYPPRASIFNPPDDTIVCRCEELTAADIRRAARIGQPGPNQVKSYTRAGMGPCQGRQCGYTIAHIVAAEEKRPVAE
VGFYRIRPPLKPLTLGELASLDIEDEQA
>AHV94486.1 cytidine and deoxycytidylate deaminase zinc-binding region family protein [Bordetella holmesii ATCC 51541]
MQMALDQARLAYAAGEVPVGAIVVSAQGEVLGMGYNRTIMDADPTAHAEVVALRAAAAQLGNYRLPGLALYVTLEPCVMC
IGAMLHARLARVIYGAQDPKTGACGSVLDVGAVGQLNHHTTVTGGVLAQPCADLLRTFFRERRQKEKTR
>AHV94487.1 4-oxalocrotonate tautomerase enzyme family protein [Bordetella holmesii ATCC 51541]
MPILNVQIMQGYAPSAKTALLKSLSQAVVDSIGAPVASVRITLAEVDAGHVIVAGELGKDMALIIVDLIAGRTPELKSAL
ISALNQAACESLGISGQDVRVVLHDVPKTDMGVANGLSAAAAGR
>AHV94488.1 paraquat-inducible A family protein [Bordetella holmesii ATCC 51541]
MVEFIGQWSMLDVFVVIILAALADFQGLMEISAGAGAASFGMVVVLTMLAAMSFDLRRAWDLETESEWDADHPELAAERQ
RVIAEH
>AHV94489.1 hypothetical protein D560_2651 [Bordetella holmesii ATCC 51541]
MRTTLAELGDVFRQPQPVDPRPNYIHLSDALFFTTDGEPISLQPTLWRGRLAQVDGFILGKLQPQ
>AHV94490.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MSTLSQLDIAALRLLIAIADQGSISAGATRSHLSVAAASKRISDLEARVGTALLLRHRRGVKPTPAGEIFIAHARRMATL
AGAMEEDLRDYANGVEDRVRIVANSAAIVQFLPEDLHGYMQGNPRVRIELEEHTSRSAVEQLQTDRADLGLFDGGYAAAN
LHCHPYRADTLVCVTHPHHRLARVRGALRFEQTLEHDHVGLYRGTAILTQMERAAAQAGRSLRLRIQVTSFDAVCRMAES
GIGIGIVPARVAQSYVTLRRLRQIRLSDSWAHRQLMLGWPQQREPSPGAQALIAHLLAAPALT
>AHV94491.1 tripartite tricarboxylate transporter TctB family protein [Bordetella holmesii ATCC 51541]
MNDRLLGIIALVLAAFMTWAGWDIEAPFAYEPVGPRAFPLLIALIIGLCGLRLAIKGGNPIHPNPPGANGRIVLMLLFAA
AYAFLFEWLGFVIATAIMTVAVGRLFGGSWVKTAIDGVVMGLLFFLLFDKVLDVVLPGGVLEGLI
>AHV94492.1 formimidoylglutamase [Bordetella holmesii ATCC 51541]
MSGAVPAIWRARDDSGERGDTRRMAHIVAADGRQPAAGEAALLGFACDAGVLRNQGRPGAAQGPAAIRRMLAGIPVHGLD
ILHDAGDVACDGSDLEDAQQRYAKEVARLLSAGARTLALGGGHEIAWGSFMGLRQWLDASGDEAAVLVLNLDAHFDLRTG
RPASSGTPFDQVVTLCAQRGLPVQYACLGVSRLSNTVALFDRAREVGAFWVEDVDMRETDLAARLADVDRLLEQVSHVYL
TVDLDVLPAAVMPGVSAPAAYGVPLEVVERIVTHVAASGKLRLADLAEANPDFDIDNHGARVAARLAWRILTAWR
>AHV94493.1 hypothetical protein D560_0975 [Bordetella holmesii ATCC 51541]
MLLAATSLRRSGRGLARAACLTLLLAAAMPACAQDGQAAALALIAQRHLGDNLAALGAQVAVRTSTYAVLVKRLGQEQAG
ALVRQQLKHALPNYQPQWNANLAAAYASVFDASELASLARDGQASPVAAKFAERQRDIGEDMRVRSTPVLQAYVTEAMNQ
AFKLSK
>AHV94494.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MSPHNARIVIVGAGLSGLYAAYLLARQGVTDYVVLEAREAPGGRIASADASGQVVSHGAAQASSVDRFDLGPAWFWPGYQ
REL
>AHV94495.1 putative metal-dependent phosphohydrolase domain protein [Bordetella holmesii ATCC 51541]
MNPAPLQGQLSFLREIDQLKRVLRQTTLIDASRRENSAEHSWHLALYALTLAEHAAAPVDVLRVVKMLLIHDIVEIDAGD
TPFHDATAQAGQAEREQAAALRIFALLPPDQGEALYALWQEFEAGSSDDARFAKALDRLQPLLHNTATDGGTWNAAHLNE
AQVVARYGPVIERGAPALWAEAARQVRAHFHSSSFLKDAGRMLRIENLSKRYADHLVFEGLTHDFGPGCVALCEQDSTGK
STLLNIIAGVMTPDTGTVWIGGHDLAGEPQAARPRLAYVPDD
>AHV94496.1 hypothetical protein D560_3264 [Bordetella holmesii ATCC 51541]
MLGRWQGRRALVYGAILATLPDLDVVISYPDPVFSMTYHRGFSHSIFVLTALAALLAWLIRKRWPGAPYFIGRLFLTVWL
VLITYPLLDAFTVYGTQLFWPLAFTPESWSAVFIIDPLYTVPLLLAVLAAAAVGVSRTM
>AHV94497.1 riboflavin synthase, alpha subunit [Bordetella holmesii ATCC 51541]
MFTGLVAAVGRIVSVKPLAGEDAGVRLDIDAGDLGLQDVAIGDSIAVQGACMTVVNLTGQGFEVDVSRESLNRTVGLQRE
GEVNLEKSLDLGDKLGGHLVSGHVDGLGEVLRFSDAGESRELVIAVPRALARFLAYKGSITVNGISLTVNHVEDGADGCE
ISINIIPHTQAVTTLRNVHAGDQVNLEIDMIARYVERMLSASGAVDGRAPAWL
>AHV94498.1 helix-turn-helix domain protein [Bordetella holmesii ATCC 51541]
MTQDLASAVQPSAATPAQGGSVGAALQSLRQAKGWSLEEVSSRIKFSTRQLEALEAERWDELPTGVSLRGLIRNYARLLG
ADPTAIVGSLDGQVRATAPARLGASRSLHGNGLAVDEERTASSWGWIVVIIALLAVGVAYAFWQGWLPQHWLPSQWFSKL
SQ
>AHV94499.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type [Bordetella holmesii ATCC 51541]
MSSPAQAGGLLAANDEDTQETQEWLEALAAVLDREGPQRAHYLLERLIDEARRSGAHIPFSPNTAYVNTIPPGLEPAHPG
NLELESRIRSYVRWNAMAMVVKANKHNPADGGDLGGHIASFASLATMIGCGQNHFWHAESDDHGGDLVYFQGHTSPGMYG
RAYLEGRLTEEQLNHFRQEVDGKGLSSYPHPKLMPDFWQFPTVSMGLGPLMAIYQARFLKYLHARGIADTSKRKVWVFCG
DGEMDEPESLGAIALAAREKLDNLIFVVNCNLQRLDGPVRGNGKIIQELEGDFRGSGWNVIKLIWGGYWDPLLAHDKEGI
LRKIMEETVDGEYQAYKANDGKFVREHFFGKHPKLLEAVARMSDEDIWRLNRGGHDPHKVYAAFDAASNHNGQPTVILAK
TIKGYGLGQVGQAKNPTHQQKKLELDSIREFRDRFGIPIADDQLENLPYFKPAEDSPEMKYLHERRKALGGYLPKRRQKA
DEQLKVPALEAFKSVLEPTAEGREISTTQAFVRVLNQILRDKQIGPRVVPILADESRTFGMEGLFRQIGIYAPEGQKYVP
VDKDQVMYYKESADGQLLQEGINEAGAMSSWIAAATSYSTNNRIMVPFFIYYSMFGFQRIGDLAWAAGDMQARGFLLGGT
AGRTTLNGEGLQHEDGHSHILASTIPNCVSYDPTFAHELAVIVQHGMKRMVEDQENVYYYLTVMNENYVQPGLKAGDEDG
IIKGMYKLQSKGAAKAKARVQLMGSGTILREVMAAQDLLDADWGVASDVWSVTSFTELRRNGLDTERFNMLHPEAPAQVA
YVTEQLASTDGPIIASTDYMKLFADQIRPFMPKGREYKVLGTDGFGRSDFRSKLREHFEIDRHFVVVAALKALADEGKVP
AAKVAEAIKKYGINPNKANPQYA
>AHV94500.1 threonine ammonia-lyase, biosynthetic [Bordetella holmesii ATCC 51541]
MSTDYLKRILTSKVYDVAVESPLEPAPLVSQRISNTVLLKREDTQPVFSFKLRGAYNKMANLPQASLSRGVIAASAGNHA
QGVALAARRLGCRAVIVMPTTSPQVKIDAVRRLGGEVVLAGESFTDAYQHSQKLEKDQKLTFVHPFDDPDVIAGQGTVGM
EILRQHPGPIEAVFVAIGGGGLIAGVAAYIKQLRPEIKIIGVQTEDSDAMVRSVRAGRRVTLSDVGLFSDGTAVKLVGAE
TFKLTRQYVDDFVVVNTDAISAAIKDVFQDTRSVLEPAGALALAGAKHYAAQHKLKGKTLIAITSGANMNFDRLRFVSER
AEVGEMREAVFAVSMPEQRGSFRRFCELVGDRSVTEFNYRIADTDQAHVFVGLQVSSPAEPDKIAAHFRKHGFPTLDLTH
DEMAKTHLRHMVGGRSSQTKNELLYRFEFPERPGALMRFLNAMNPDWNISLFHYRNQGADYGRILIGIQVPPTDKKQFRS
FIAELGYPHWNETENPAYKLFL
>AHV94501.1 hypothetical protein D560_3240 [Bordetella holmesii ATCC 51541]
MPAPYRGQQYIIEDWRGYQLQQPPRGYQWIGVGADYFLIGVATGIVLESVFGR
>AHV94502.1 malate/L-lactate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MTYANTLADDMKGWLMPTAAQVREQILSLLLAWGIAPSQAQTSAEVMVDTDLSGVDSHGLSMLMDYDTSRRNGRLNLQAR
PHVVRQAGATALIDADAGLGHTPAVMGMRIAIDAARAHGVGVACVRNSHHFGAAGYYVRLASAEGMIGLCTSSTRTINTV
PTGARVPVLGTNPIAFAAPARRNPPFVLDMATSSAASNKVKVYELRADPLPAGWVVDEHAASVTDAAQAMDILFKRPKEI
GGGLTPLGGSREMSSHKGHGLAMMVHILAGTLSGASFSPVRIKTQRTQDPDNLGHFFCAIDPAAFGSAETFGDDMDVLLD
TLRATPPATEASPVLVHGDLEAAARERRSRQGIPVPPALADHLRRLCAASQVPFLFK
>AHV94503.1 biotin/lipoate A/B ligase family protein [Bordetella holmesii ATCC 51541]
MSRPDWKDYRWELVHEAPQPPLLHMALDAVITDEVGAGVRAPTLRIWEWAAPAVVIGRFQSLRNEVDAEGARRHGVSVVR
RVSGGGAMFIEPGNSITYSLSVPQEFVAGMSFQESYAFLDSWVIKALHDLGIKAWYQPLNDIASEGGKIGGAAQARRSKA
VLHHVTMSYDIDADKMVEILRIGREKLSDKGTTSAKKRVDPLRSQTGLARDAIIERMLQTFAAMAPLQPVALADSTIAAA
QKEVDEKFATEQWLTLVP
>AHV94504.1 putative exported protein [Bordetella holmesii ATCC 51541]
MNRLSRTLTVAFASGTMFAAAGATAAYPDHPVNMVVPFAAGGPTDNVARSLAEAMRPSLGETIVVENKGGAGGTIGTNQV
ARAPADGYQTLLMHAGFSTAPSLYKSPGYDPYTSFAPIGLVVDVPMTIIARSDFPANNIQELAEYVKKNHDKISLANAGI
GAASHLCGVMLADAFGVNLLTIPYKGTAPAMNDLLGKQVDLLCDQTTNTTQQIASGKVKAYAVTSLKRVPTLPDLPTMDE
SGFKNFEVGIWHGMWVPKDTPKDVQEKLVKSLQAGLADPKFQERMKQLGATVLSSEANPKALDAKVKQQVPQWEKLFSKA
GVEKQ
>AHV94505.1 ribose 5-phosphate isomerase A [Bordetella holmesii ATCC 51541]
MLTQQQLKQQAAEAALEFVEQVAGPDVVIGVGTGSTADLFIDGLARFAGRIRGTVASSERSAQRLASHGLAVLDLNDVDT
MPLYIDGADEIDANLHMIKGGGGALTREKIVASVAERFICIADESKLVERMGAFALPIEVIPMAREAVARRLAALGGQPR
LREGFVTDNGNVILDIAGLSITDAPGLEARVNNMPGVVTCGLFALPGADVALLATQNGIRRLGR
>AHV94506.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVEKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGLPSRRKAVVYSAG
>AHV94507.1 putative exported protein [Bordetella holmesii ATCC 51541]
MQFPGTQPKSSPNWSPPATLTMTVEPAGTPAPAPIHDTPESVAEYQRCRTVSDRAAVSNEQRTAGVAACLKALQERRQH
>AHV94508.1 cyd operon protein YbgT [Bordetella holmesii ATCC 51541]
MWYFSWILGLGLACAFAILNAMWFELREGHAHDPFRRPADE
>AHV94509.1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein [Bordetella holmesii ATCC 51541]
MKICGLTREADVAHAVDAGADAIGFVCYAGSKRYVDVKRAAQLRREVPAFVSVVTLFVNPTVDQVRSVIDEVGPDLLQFH
GDESPEDCSRYGHRYLRAFRVGGPALMIPRPSLQRAVITAARPAGCSIAIVPALVAAA
>AHV94510.1 ATP-NAD kinase family protein [Bordetella holmesii ATCC 51541]
MHFPIVALIGRYQDTGLDAPLRTLAEMLTQAGRRVLVDADTARNTGVHEYPEATLQEIGEAASLAVVMGGDGTVLGAARH
LAPYGVPLVGINHGRLGFITDIPLQDARNALARVLDGNFQIEERMLLQGSVWRGDAHMYSASALNDVVLNRAGRGGMIEM
RVELDGVYMYTQRADGLIIATPTGSTAYALSAAGPLLHPGLNAMVLVPVAPQSLSNRPIVIPDSGVLNMTLTAIGRVETG
ASVHFDMQTWSDLQLGDRITVQRAPHTARLVHPQGYSFFSTLRRKLHWNLMPQATDNIE
>AHV94511.1 hypothetical protein D560_2623 [Bordetella holmesii ATCC 51541]
MNKVFVRAIFPFMTSLVEAGLSHTQASFSPRTLVQSLLTVVPVTCPQI
>AHV94512.1 marR family protein [Bordetella holmesii ATCC 51541]
MTRTLDRLELKGLLRRMRSNEDRRVIKLELTDSGLAKARQIPTYIAKALNTHLRGFSPEEVLQLRHLLNRMLANGSQQGC
S
>AHV94513.1 FMN-dependent dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MKSVLSLDDFEEAARRRLPRPIFGYIAGAAETNLSRDDNRQAFSELGFVPRVLRQVAGRDQSVELFGQPYAAPFGIAPMG
ISALSAYRGDIVLARAAHQAGIAAIMSATSLIRLEEVAAAAPGTWFQAYLPGDVERIDALVDRVAAAGFRQLVLTVDIPV
SANRENNVRTGFSTPLKPSLRLAWEGIRHPRWTVGVFLRTLARHGMPHFENSFATRGAPIMSASVLRDFSARDHLNWEHV
ARIRARWQGQLIIKGIMHPADAALAREHGADGIIVSNHGGRQLDGAVSPLRVLPQVARAAGDMVVMMDSGIRRGTDVLKA
LALGAHFVFVGRPFNYAAAVGAQAGVEHAIGLLRDEVDRDMAMLGIVSPTEMSTDLLAVRAAPGLLTPTGNG
>AHV94514.1 isochorismatase family protein [Bordetella holmesii ATCC 51541]
MSETKKRIWDDFLTDRDKQVLAQAGYGKRGGFGKRPALFIIDVQYNFCGDTPEDILEGLKQYRTHCGREAWQAVEHIVPL
LELAREKNIPVFYTESGRRADLLDSGVQVGKNHRGGEKTVLADTHATQTVEALAPRPQDIRITKQKPSCFFGTIFMSHLN
FLDVDTLILVGCTSSGCLRATTVDAYSYNFKVIIPEECAFDRFQSSHAMSLFDLNCKYADVIPSVEVQDYLRELPAPKAD
>AHV94515.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQARGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV94516.1 diguanylate cyclase domain protein [Bordetella holmesii ATCC 51541]
MRRGGPTHTDVYLLLAVAWAASVGYGVTISALSGDWIAITMTCLSAAAMVGGICFRNFGAPRLTAVMVVLALGPCITVPI
FNSAWQLWMIAWQLPMYIASMTVAAYKLNAMLVTTMRAERENEERARRDFLTGVLNRLGLSLALEEATLLVRERNQQYAL
LYLDLDGFKAVNDTLGHASGDRLLREVAQRLCQLAPGGTAIARIGGDEFVLLLRTERTFDPGALGQRLIAEVSQPYDLGE
STPVTISSSLGIALIPQHGHDMPDILKAADRALYQAKSSGKGRWAIAS
>AHV94517.1 guanylate kinase [Bordetella holmesii ATCC 51541]
MSAHSGNVFMVVAPSGAGKSSLVRALLDRDPSIMLSISATTRAPRPGEQDGREYRFVTQEAFTALRADNRLLEWAEVHGN
FYGTPRDLIDEATAAGRDVLLEIDWQGARQVKQRYPGAIGIFILPPSIEELETRLKARGQDSEQVISRRLLAAGGEIAHA
PECEYVIINQEFSVALSELMQVISAARLRFSSQAVRNASLFAQLGIPASH
>AHV94518.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MQDTQNDYQDIREAVRSLCSQFSAEYFRKIDEERGYPDDFVRALTEAGWLAALIPQEYGGSGLGLTEASIIMEEINRSGG
NSGACHGQMYNMGTLLRHGSEAQNANICPESPVANCACSPWG
>AHV94519.1 acyltransferase family protein [Bordetella holmesii ATCC 51541]
MAWLRSFLYMVFLSVTVIPYAFACILWAPLPLRLRYRLTVGWPRLAIWGAKVICGIRWQVKGWENLPDGPIVLLSKHQSA
WETLFFPGHMPRPVCFVYKKSLHWVPFFGWSLALLRMIPIDRAKGRDAFEQVVREGQKCLDDGRWPLLFPEGTRVPPGQM
GRFKMGGALLASRTGASVIPVALNAGECWRRNAFVKRPGLVTVFFGPAIASQGLTPDELNAKVHAWIDAEMRTLSPERYD
QR
>AHV94520.1 malate synthase G [Bordetella holmesii ATCC 51541]
MTERIAGLQVAASLYQFIENEALPGSGVDSKAFWEGFAALIHDLAPQNRKLLAERDRLQTELDTWHRRHAGPVRDPAAYR
SFLKQTGYLQDTPAAVRVRTENVDDEIARQAGPQLVVPMSNARYALNAANARWGSLYDALYGTDAIANSVGPAGSTYNPQ
RGQAVIERARDFLDSAAPLARGSHRAATGYLLRGGQLIVTTAQGDTALRNPSQLQGYRGEPSAPSAILLKNNGLHFEIQI
DRQHTIGATDAAGIKDVLMEAALTTIMDCEDSVAAVDAQDKTHIYRNWLGLMRGDLTETVSKNGHTFTRRMNPDREYLAA
DGTEFTLPGRSLLFVRNVGHLMTNPAILDRDGQEIPEGILDAVITSLAAKIDLEQKRNSRKGSIYIVKPKMHGPAEVAFA
DTLFARVEDLLQMPRHTLKMGIMDEERRTSVNLKACIGAAADRVAFINTGFLDRTGDEMHSVMHAGPMMRKGDMKSSAWI
AAYERSNVLVGLDCGLRGRAQIGKGMWAMPDLMAAMLEQKIAHPKAGANTAWVPSPTAATLHALHYHQVDIQAVQQALEK
TRLADVADELLAGLLTIPLGDPSTWSATDIQRELDNNAQGILGYVVRWVDQGVGCSKVPDINDVGLMEDRATLRISSQHI
ANWLLHGVVSHEQVEQTFQRMAAVVDQQNAADPDYLPMAGHFDSSLAYQAATALVFEGLEQPNGYTEPLLHQFRQAFKAA
HES
>AHV94521.1 lysE type translocator family protein [Bordetella holmesii ATCC 51541]
MLPLDTLIAFFGIAVLLALTPGPDNLFVLMQSALWGRKAGFLVVLGLCTGLLGHTAAVALGLAAVFATSPMAFVVLKLAG
AIYLLYLAWQTLRAPTGANRSQAPAPLGAGALYRRGIIMNLTNPKVLLFFFVFLPQFTQIGAGPLAWQIIELGAVFMAAT
LLIFGAIAVFSGGFGQLLQRSTTAERWLNRLAGVVFIGLALRLATASR
>AHV94522.1 2-polyprenylphenol 6-hydroxylase [Bordetella holmesii ATCC 51541]
MMTFLRLLRIICVSLRYGLDELVLSSLNHPLANGLLRVMRLGTRPSAPRGERLRRALESLGPIFVKFGQVLSTRRDLIPA
DIANELALLQDRVPPFPSAQAAASIEAALGAPPTQLFAQFETDPVASASIAQVHFAVMHDGREVAVKVLRPGMRDVIEKD
MALLRIVARIIERLGPDGRRLKPREVVAEFDNYLHDELDLVREASNCSQLRRNFGPESGRGDVLIVPEVIWEFTASTVFT
MERMYGVPVGQIDRLRAAGIDIPTLARSGVEIFFTQVFADGFFHADMHPGNIYVSDNPATLGRYIALDFGIVGSLSEFDK
NYLAQNFLAFFRRDYRRVAQLHIESGWVPADTREEELEGAVRAVCEPYFDRPLAEISLGQVLLRLFQTSRRFNVEIQPQL
VLLQKTLLNVEGLGRQLDPNLDLWKTAKPYLERWMRDRVGWGGLKRSLTKEAVQWSQILPAVPRLMHDYLNRPDVSPQML
AETRRLRRAQEQGNRLVAALTAVLAVGIAVALWALTR
>AHV94523.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRN
>AHV94524.1 membrane transport family protein [Bordetella holmesii ATCC 51541]
MAGALWAGLGLTLPEGMDRYVELLGASASPCALITIGLFLAQAQPGGAGRPVARLVAGKLLLQPTVTAILAFWVFSMPPL
WTWCAVLISALPIGTGPFMLAQLYGRAANTTSRAILLSTVLSVITISALVAWIQQFHPI
>AHV94525.1 filamentous hemagglutinin family N-terminal domain protein [Bordetella holmesii ATCC 51541]
MLSCALWLAFGLSGPAGAQVTPAAGAATTTHTSANGVPVINIAAPDAHGLSHNKFQQFNIVAPGAVFNNSKQNGRSQIAG
QISRNPNLTGALASTILSEVTGPGASSLNGTLEVHGGTANLIIANPNGISVDGLTTLNTHSLTLSTGVPSVRDGVVSLGV
TQGQLTVGSSGVNTDGLQTFDMVAKLIQIGGAIGGTQGNQADIKALAGSSNFITATRSAAPVRRKRAAEAGSGYAIDGSA
AGAMHGKAITLISTDAGLGVRQPGTLVSAGDISIDARGNVEVGSAKARDLALRAGADVKAGTVQTAGKLTASAGRNLAVD
TMVAGQGASITTDSGDITLGPAGKAESAASELTGNVELTARNGSIILSRDIKADSFKVRARSWVFRNAVVEASGKSGAPN
SVDVEVSDRIVLVGALHGVDGAGNPITNSVVKMVDGRPVVHEASSGKALPDATVGSSVGVRALKGNILLKGSSLDNQSSV
ITALDGDTTLSFTGNIENQGVIQSKKRLTVTAKDIKNTLLFDSDTNIELTASGKIENTGEISSLDKINKRAVRNVLLHAG
EKLTNSGFLGASGKLTIEGNVAQDGAKTRPDVINDAQGRVDVEELSLTGNRFDNKGSFVVRGSGATADVTQMFRTTGSFE
VSSQNGLDVRAGDVYADGKLTVKGRAKLDARANAQFAANAKVQVNTLEVKAQDLINKGDVTSTGQVNVQAQQSIVNHGKL
QGHEITLAAQRDVRNEGVAVLIQARQALSVTTTGSVTNGGTLRGRTVTLQTDEAANERGAMIVASQSGDFKVRKSLRNEG
TISTKRTDIQAAELHNMAGGSLSATSAKITVSQGLTNSGEIKVSGMLDGRAATLSNQAGAQLSAAQAKLNVQGDLSNAGD
IKTQQLTLAAKGLHNQPGALLQADSAQLTVQEDIDNAGEVKAKKLTLGARKLHNKATGKIQADNATLRVQSLDNAGVAQA
SHDMSIMTTDYANAGQLRAGHDLTLNSSNIAGLTIDAKRQSPLANGTLTLQAKYLTVRTGIENPGNVVLTASTGGITNYS
QIATPGALTLTAKGGITNSPGSLIWAGKDVTASGHTIDNQRDAWLMSQNGKVTLAASQKLRNEAGRIEAGGKLSIDTPNL
ENLSELQGDVRVQRSQKETVNISQDQGFWSTGRWVRTKIHSFSVSTPVSTLKVKQGGIRAGGDIDINQQQHKGKKARVYN
EGAIVAGAQLRVDGNVENRSKGKSLSVMDYLRQNTGGFSTRVEEVALPSGGHDGRFTSLYDMLDFMLNNSAHRVSLGGFY
SYSPTYNLFPVLAGADLSKAPELQKMLAAALGADWRGLTAVQREERWREFKNGRRGGTVDYYPLEQTVLAGKAGVTHTGG
TMLVGGNSTQNAAAASLQAHQRQQAQIGKVQVPILAGTLDATFKLDEPQLEDIDLDFPDPVLDELLANRFVFRPVSPTIS
TAAIKAPGKQTLPRPYFETRLNYIDQSQFYGSGYFFQKLGYQPQQGARVSGDNYFDTQWILRERARLLGAAGARMGSGDA
QTVKQLMDNGSEQASRLGLQVGQALSADQVAKLDKDTVWYVWTRINGTQVLMPRVYLARASRQAADDVRKQGGAVVASAG
DINVDTGGGDVTVANGALVGAKVSIDTRSAVAKQEAAQRDAMLARLGQELGTPLNSAIDTLAQAHQTQLQQAAGKVMALA
GAALAKAPDGKVTLDVSKLDTTQLARLQSSAQDFYWNSQLNATDLLELGRASVGLDASGTSVAAGGLNADAARGMLAERA
GAWRQKHDKGQALTHKQLLDVLQRVSEASTGKLAVTKPTAAAVTKAAQRLAESEMRAKGSYAIKAAIGQANFSSTGGVRA
GISGQESVTVRAGDSQIAGAQLQGKTVDLQTEGRLRTIVGMRYDEKGHLLARDDQSQIQGSDSVKIAATDYASEGGIVAS
AGEVALKTSTIKLGTVKEVGSHYASHVTHALGEALAALSQTIKTEQSASATDVGSTITAKKLIVDNSGDVSVTGGTIDAN
KSEIDIGGNLQLKAGENHYYGYSREDRRELALGAAVGAGGYEAAASLGSETGGSAHAGRGKTAGARLTAGFSASSEESTI
QAKTHRNAQFNVGEGKVNVRGTADLGGADINRDLAKSQAAVGAAGLSIEAGNIASTKAVDDIHTQTSYTRYTLGAEANAG
SSVATTATRFGDMIAQTVDDPKRKIDPALAAAMAATETTQLLLGDTGSLTGTAKAGAEWGHQTSTETRESTQTFGGNISL
AANKGDITLAGTQFKGGDRVTLDAKGDVSLRAAQSRTVSHGEDHGLTLSASINGGVNAALGAAGAGVSATLSGSHTVSTE
NSTRYQNANIAAGEVSIRTAGDLALSGARITVQDKAKIDVGGNTRITSVQDDIQRKQEGGTWTAGAVAGVNTKTIGSASV
TVGLTGEEHHDNAKVVREQAGIQAGKSLTLTSGGNLDVTGAHLVSADGRVNAGGKINASQLKDKIDKDGGKAGGSGAINP
TTGLPMVTIEYGRDARDHVEATNNATIAVGKASHVAAAQGIAGHLNTDVGQQRVVTREEYYAGGESALSVALKPAVEKLR
DKLNKQDVVEHAPPVVKTKVVNTQTATITPPRDVHHAKVVDPGHPAPVVKTKVIKTETATVSSTPKVQYAQRVDPGHPAP
MVKAKVIKTETATVTTTPKVQYAQRVDPGHPAPVVKTKVVKTETATVTTTPKVQYAQRVDPGHPAPVVKTKVIKTEKATL
TTTPKVQHAKVVNPEPEVPAVSTPVSQPPKLVAPPVADQVDAGPKPAPKVDPKPKAKAAAARPNIKPQPQGGRYAVQEQV
KVAQKQVSEINLMKDVGGKLAKPVTLTFTGPNGPETVTITRREQLMKLDGKLLTSKPAQGAEQKFLLKVEDVGGKNYRIS
YRTAK
>AHV94526.1 DNA-binding response regulator [Bordetella holmesii ATCC 51541]
MSMTVARVLIVEDNLTIAGNLYDYLQIHGFLPDVAYDGHAALSMLQRQEFDAVILDIGLPGKEGYAVLHALRQEMRKPVP
VLVLTAHDGLEDKLAGFSHGADDYLTKPFALAEVKARLLALVQRSRRSVVDAIYRCGPLALDSRSREVSVQGRPVHLAHK
SVIIVEMLLRDPGNVVSRETLENALWGDEPPASDALRSQVHLLRRALSEAGFDGIETVHGMGWRLVAPDAS
>AHV94527.1 hypothetical protein D560_2400 [Bordetella holmesii ATCC 51541]
MADFSASRAANELYKTNFAVLAIPAVATSNPNLPADLASRMIKNDFVWAATQREPILAEWTKRYDSKSEPKKK
>AHV94528.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MAQWRRKRISEPAYHWARAALPGLSATEREAIEAGDVWWDGDLFTGNPDWNKLLAVPAATFTEQERQFIAGPVARLCALL
DEWEIEWKRRDLPAEVWDLMRRERFFGMIIPKEYGGLGFSPYAHSEVVRRVSAYSITAGVTIMVPNSLGPGELLLQFGTD
AQREFWLPRLADGREIPCFGLTSPQAGSDAAAMTDVGVVCRQVIDGQELLGIRLNWHKRYITLGPVATVLGLAFKLRDPD
GLLGGPQEIGISVALVPTDAPGVEIGRRHLPSMQVFQNGPNHGRDVFVPIEALIGCPAKAGHGWQMLMSALAAGRGISLP
SLSAAGAVISAHTSGMYARVRRQFGIPVGRFEGVQEKLARLAGHAYLIEAARRLTCAALNQGHKPAVVSAIMKYHATERM
RMSVNDAMDIHGGKAVIDGPGNYLGALYRALPIAITVEGANILTRCLIVFGQGAIRAHPYLMREVMALGETDQAVGQAQF
EQAFWSHMRHSGMTFLRAWGRAWTGGCSHPPRRCVRSAGISAG
>AHV94529.1 sensors of blue-light using FAD family protein [Bordetella holmesii ATCC 51541]
MLSTLIYRSRAIGAIGPQALQELLALAKQRNASLSVTGILLFDGIHFVQLLEGSDYAVAELLMPYSAILGMTMSCF
>AHV94530.1 ribosomal protein S4 [Bordetella holmesii ATCC 51541]
MARYTGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQKLKRMYGVLEKQFRKYFVEA
ERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLVSHRAIELNGHTADIASILVKAGDVITVREAAKKQARIRESL
DLASSIGIPQWVEVDTSKMAGTFKSAPDRADVARDVNESMVVELYSR
>AHV94531.1 aldehyde dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MEYAGQSNLKRVWLECGGKSPHIVFDDCPDLPRAAEVAALAIFSNQGEVCIAGSRLYVQAGIYDRFMSLLAGYACRLQPG
DPLNPDTPMGAIVDERQMQGILARIDAGCAEGATLRQGGRQVRHDTGGYYIEPTIVECTDQANSLVREEVFGPVLAVQRF
TDEDEAIRLANDSAYGLGAGLWTAALSRAHRLSRRLRAGLVWVNCYADGDISVPFGGVKQSGFGRDKSLHALDKYTDLKT
TWISLR
>AHV94532.1 hypothetical protein D560_1756 [Bordetella holmesii ATCC 51541]
MRDLLPLGLDDFLRPDSAEELRLRIALACRRRTRAATPALEPEEAWVYDVRRGQFQDASTLSEPAEPLGGVEASLLDTPF
GAAKARVVGHFERTYLYCSLARYEGNVTQAARAAAKHRRAFWALMRKHRIQAAPYREQAREQRPRAS
>AHV94533.1 hypothetical protein D560_0503 [Bordetella holmesii ATCC 51541]
MKKGIAIGAGVIVVVVGAWLGGTWYTGERLADESQARLDEVNAYLAATYPGTGLKVEQLAFTRGFFSTEARYGLVAAALP
GSPLKPGERLEFDARIDHGPLPAGALAEGHLMPSMAFVHTAMADTEAARPFFTVAKDKNPLVTDVVLNYGGSASVKAEAA
ALQWSNPQVDFGGARFDGDIGKHLGSIKGHIQAEPTAIFLPRDQQQPATQIMLGHSRMDIDGKTGKYGYQIGTSSVHIDR
VELRSQSEAGSWLSENVDYKGVLKEDDRFLNGQVDFSAEKLIFNGAALGSQQLTMTFSRVDGEKLKAVNEVYLRLANEAA
EQGRARGEFNSEQAQQLALAAGPLLADNPTLTLEPFSWKNDKGESRLNLAVTLAQPADPQAQGSEFMRELIKKLDARLVL
NKPMMTAVGTAVLKLQGKSDEEAARQAARQVNNIAGMALMLNLGKPEGEDIVSTLQYGDGKLNLNGREMPTDAVLGALPH
>AHV94534.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MPEGACDCHTHVFGPPSAYPFDPSRVYTPGPASIQQLRTQHGKLGISRVVIVQPSPYGADNRCTLDALSAYDPKDDDAAR
AVVVMDAHTSLSSLRDMHARGARGVRVNLKTGGQNDPDVARTLLLDASARVEQLGWHVQVFASLAVIERLADEIARLAVP
VVLDHFAGLRGEAGVTQAGYRCLLDLLASGNVYIKLSAAQRASAAAAHEDMRPLVQGLVACRSDRLLWGSDWPHPGAWPG
VARSAQGIEPFHPIDDAQALERLADWVGSQADWNAVMADNAARLYGWPD
>AHV94535.1 holliday junction DNA helicase RuvA [Bordetella holmesii ATCC 51541]
MIGRITGTLIEKTPPVVCVDVNGIGYDIDVPMSTLYALPDTGARVTLFTHLVVREDAHLLYGFGTAGERAAFRELVKVSG
IGARTALAVLSGMSVAELAQAITLQESGRLTRVPGIGKKTAERLLLEMRGKLGADIGAAPHAVPDSQSDILNALLALGYS
EKESLATLKTLPEGLSVSDGIRQALKALAR
>AHV94536.1 marR family protein [Bordetella holmesii ATCC 51541]
MALSPQIERFVLHFGEMGSRWGVNRTVGQMYALLFLSPQPLNADDIAEALGFSRSSVSMGLKELQSWRLVTLIHQVGDRR
EYFETPEDVWEIFRILMEEKRKREIDPTLTLLRDTLLAGSGDGGEKYAQHRMHEMLELIELSTGWFDEVQHLPPETLQNL
MRLGSKVQKVLDFAGKLRSRDKSLPTSIRE
>AHV94537.1 iron dependent repressor, N-terminal DNA binding domain protein [Bordetella holmesii ATCC 51541]
MIADQIASRIRAGDFACGARLPAERDLAEQLQVSRASVREALIALEIEGYVEVRVGTGVFVCAAREDGQYDPSQALSQGG
ERTDIGPFDLLETRLLLEPECAALSAQKASAAQIAAIRNAHEAMSLTDSPSVHDQAFHGAIAAACGNAALAAAISHIWHL
STISPVFSRLETHFVTTRVWSAARDEHERILQAITDRDPIRARHAMHEHLVGILARLREDFGSGPIR
>AHV94538.1 NAD(P) transhydrogenase beta subunit [Bordetella holmesii ATCC 51541]
MISLNLVTLFYLVASVCFIQALKGLSHPATSRMGNAFGMAGMGIAVLTTAALIVSLARQDGASPAIGLGWVLLGLVIGGS
VGTLMARRVEMTKMPELVAFMHSMIGLAAVAIATAVVAEPHAFGIAAAGMPIPSGNRLELFIGTFVGAITFSGSVIAFGK
LSGKYKFRFFQGAPVTFKGQHALNLMLAILMLACGLWFMATQSWTPFILMTVLAFVLGVLIIIPIGGADMPVVVSMLNSY
SGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCRAMNRSFFNVILGGFGGQPAATGNTAEQAQRPVKSGSPEDAAFL
LANAESVIIVPGYGLAVARAQHALKDLTDKLTARGVTVKYAINPVAGRMPGHMNVLLAEAEVPYDQVFEMDEINAEFGQT
DVVLVLGANDVVNPAAKNDPASPIAGMPILDVYKARNIIVNKRSMAAGYAGLDNELFYMDRTMMVFGDAKKVVEEMGRAI
D
>AHV94539.1 bacterial regulatory, Fis family protein [Bordetella holmesii ATCC 51541]
MNKKDVLEECVRASLERYFEDLGDSEPHDMWDMVMRCVERPVLEVALERAGGNQSRASEMLGITRNTLRKKLLAHNIQP
>AHV94540.1 putative branched-chain-amino-acid aminotransferase [Bordetella holmesii ATCC 51541]
MSQDKPEFLLERHPSPVAPAERERLLQDPGFGRIFTDHMATVRYNADRGWHDAKIEARADLRLNPSTLVLHYAQEIFEGL
KAYRLPDGSATLFRPQANARRFRNSAARLAMAELPEAVFVESVEQLVRLERDWIPSADGASLYLRPFMIATEVALGTKPS
ADYLYAVIASPVGAYFKGAVRPSRSGCRITTRAPRPAAPVRPSAAAITPPACRPRPKARAKDATRWCSSMRSSAAGSRSW
VA
>AHV94541.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MTHTGFDAKAAVVVRYYRELLKFLHRSVNDSDVAADLAQESYARVLAVQQSGQAVAEPRALLYRTARNLVIDQHRRDSVR
GQTVALDDDEALQPSLQPFLTAPEALEPETAAISAQNTEALLNVIGSLPLRCREAFILHKFDALPQAEVARQMGISLTMV
ERHIKTAMLVCRRCHEGDAAKGAR
>AHV94542.1 hypothetical protein D560_2242 [Bordetella holmesii ATCC 51541]
MPLLQKNIKKLTSGLRLGLFGRTFLLLAALMLVSLAAWLQVFFSME
>AHV94543.1 histidinol dehydrogenase [Bordetella holmesii ATCC 51541]
MALINRLDSRAADFQAALSRLLAFEASEDESIDRAAAGILADVRARGDAALLEYTQRFDRVAVSDAAALEIPKSALHAAL
ASLPAAQRNALEAAADRVRVYHEHQRAETWTYTDAEGTLLGQQVTALDRVGLYVPGGKAAYPSSVLMNAIPAKVAGVPEL
IMVTPTPDGLRNPIVLAAAAIGGVDRVFTIGGAQAIAALAHGTATVPAVDKIVGPGNAYVAAAKRRVFGVVGIDMIAGPS
EILVICDGTTPADWIAMDLFSQAEHDELAQSILLCPDAAYIDEVEAAIERLLPTMPRADILRVSLANRGALILVRDLEEA
CAIANTIAPEHLEISTEQPEVWTARIRHAGAIFMGRYSSESLGDYCAGPNHVLPTARTARFSSPLGVYDFQKRSSLIQVS
RQGAQTLGRIAAELALGEGLQAHAASAQYRLDEQP
>AHV94544.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MTSRSKSVRTYGMRERSDRLDFYIRTQDARPALEDMHRHDYFQIQINLGGDTVQQIGGTTRPFVKGMMAFILPHRLHRIP
HPPDGRFMVINVSQEFLLPGLQCDPLDLEDVPLSQAPELAPFRFQESLDFSVSAEELPELESLLARMLHVDRERGFGSAA
VLRGGLLQLIGQTCMRHASALQAGLPRQGRRQALARVSAHIEARLDQADLSLNSAAAAAFLSPSHLAHLLRKTLDRSFTE
WVLERRMTRAKALLLTSDKRITEVAHACGFADEAYFSRRFRQSVGMSPRQFRQQ
>AHV94545.1 bacterial signaling repeat protein [Bordetella holmesii ATCC 51541]
MGFSGAAFLYVGGKPFSLPRCLVAGVAVGLAVAAMHYIGMSAMRMPAIFRWNSSLIVLSVLIAILAATVAIWLAFNVQRE
GQRVAAAVVMAVAIGGMHYTGAAAGVVVCSSPLGPGQAGQVGGAALPYVAFIGAVTILIAMRWQMHRSYRRYQLRMAARV
DDLLGAAHPARPVV
>AHV94546.1 receptor ligand binding region family protein [Bordetella holmesii ATCC 51541]
MTLALSAGAHAADPIKIGVAGPYTGGSSSMGVSMRDGVRLAIEEINKNGGVLGRQLVGVERDDEAKNERGVQIAQELINK
ERVAASVGYINTGVALASQRFYQDAKIPVMNNVATGSVITHQFKAPEYPDNYVFRNAAHDSIQAPMIVEEAVGRRGFKKV
AILADSTNYGQLGREDLEKALAAKGIKPVAVEKFNIKDVDMTAQLLKAKEAGAQAILTYGIGPELAQIANGMTKLGWKVP
IIGSWTLSMANYIDNSGANGEGARMPQTFIQDPDTPRRKAFIDAYLAKFKPKNNRIDSPVSAAQGYDSIYLLAAAIKQAG
TTDGPKVREALENLQTPVEGVVMTYNKPFTHDNHDAITEKEVVIGEVKGGRVVKAQ
>AHV94547.1 hypothetical protein D560_1620 [Bordetella holmesii ATCC 51541]
MTDSNPFVLPGMGQDSELSGNPLLASMEMMRQAWAGLAGPGGLGQSLPMTPPMNLEDLERRIAELRTVEGWLRLNLQMLS
SSIQGMEVQRATIATLRSFVGSAAATASNSEGEPSPLEVALGLRSAKTDKPAQTVKPEAPADSADAAASEPINEAAQSAS
RAWWELLNQQFSQIAAATAATAASLPSMMPGMDAMAQAGAAGTQGKPAAPAAGAAPKKAAPRKTAKTADSAPSTATPRRA
RTASKAVRKTPRAS
>AHV94548.1 site-specific recombinase family protein [Bordetella holmesii ATCC 51541]
MTETPFFKLTEACAQLSNPTIWRMPDVFAQSLAYFRALLDECRLQARNVYAELEVNGVSVEVVFQIERMKSRLRRIELLL
GVWVDPTQKHKHLHLMAELIQSTQALRSVRHLAASSFAHLARRVMERTAQTGEHYIARDGREYREMIKAALGGGLITAAT
VYIKLAIYGLHAGRFMEGMLASLNYASSFLVIHFAHFTLATKQPAMTGPALAHRLDDTGTAQGRQAFVDDTLAMIRSNAA
AIFGNLAAVFPVALAVQWVAVKIFNHPLLSPEKAQQTIDSFSIWGLTPLFAIATGVLLWLSSLVAGWADNWFALHRVHDA
MVYNRRLRYALGERGAQRWAAFWQRNISGIAGNVSLGLLLGLGPELVGFFGPQVEVRHVTLSTGSMGAAIGVLGWDVAQT
PAFWQAVAGIAAMGVLNVAVSFALSFNLALRSRALKRSDRREISAAVRHAILRSPGSLIWPPRPRNVAAAGGPT
>AHV94549.1 hypothetical protein D560_3101 [Bordetella holmesii ATCC 51541]
MGGAGVSKHPLRRLPSPCAPAGHSDLRHGGWAHPGTGQAHSSIQAWARGK
>AHV94550.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MRLRALPSQLALSFMASALLASPMLHAQGAVMASESTARRFDIPGGPLAQVISQYASAAGVAISFDAAQTRGLTSAGVHG
TYMVDAGFAVALAGSGLQAVRGAQGAYTLQALPAAGSVVILPSIAVAGSTERPADDGFVALRSSAGTKTNTPLIEIPQAI
SVVSREEMDQRGVQNFNSAVAYTPGIRAIDYPGGQGAPDIHLRGFRAFNLFSTFRDGLRAGVNQYDIDIETYGLERIDVI
KGPSSVLYGQIAPGGLVDMRTKRPTETPLHEIELQGGNFDRRQAAFDFAGPMDQEGKWLYRITGVARDSGTQVDHSPDDR
LYLAPSLTWRPTDRTNVTVYASYQKSKRGGSEQSLPLTGTVNDNPAGRFPSTVFLGQPDLTHYTVENTSVGYEVEHAATQ
NWTVRQKARYTHADVDYVSSGARNSAQLTAGRYYTFGMQDRPKSTDTFLVDTNVEGRVSTGAVQHTVLAGLDYGYYSGRE
SRTGAPTARWTSSIPSTPIPPRGTASNRWTARARSIRPGCMRRTNCAMNAGC
>AHV94551.1 hypothetical protein D560_0293 [Bordetella holmesii ATCC 51541]
MFERLMNASRLNEGLGGGAWASTHPLSIERMSDVQNRIREQPSSRYIDSDDFWFIRAKMRVAQGRDAASLRTAQQQLLDE
SRALSGVRRAAAEYGLAYYNFLRNDLVQAQHYLDLAGAGGRTSPQMAKLAIDLAAARKDTARELALAQAAIKQWPDRRAL
GMAYAQALQDSGRNAEAQAYLRKRIEQWGSDEPGLYQLLAQSQERTGHPVEARRDMARFYVATGAYAAAESQLQQARSMS
TDFYEQSQIDVQIREVKQKLADERALLERFRSG
>AHV94552.1 membrane transport family protein [Bordetella holmesii ATCC 51541]
MFAVVQFYFSAVVMLMPLLACVGIGVFWGKRDYPFGGTFVTMLVTSVTTPALVFHTFVTTQLDDRSLGDITAASLLALLI
CALICAVVLRLSGLPVRKLLPTAFMPNAGNLGLPVSQLAFGDVGLSAAVAFFAINSFVMHTIGVRILPGVATRGGWRNPV
LLASLIAVAWRYSGVPVPSWLIETARMLGGVTVPLMLISLGHALALIPSGGLRLGAGLGVMRLVVGLLSGLLVVWALGLD
SPLAGSLVLQMAMPSAVVCYMYARRYTDMGDTAAGAVLVSTVLFLLIAPALLWFTRH
>AHV94553.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MTQALLELRGLEVAYGGIRAVRGIDLHVQTGELVCLIGANGAGKSTTLRAICGLVPAAAGEIHYEGQPITGAKSFELVRR
GLVMVPEGRGIFGQLTIEENLAMGAYVRRDAQQVREDTEKVFALFPRLAERRRQAAGTLSGGEQQMVAMGRAMIARPKLL
LLDEPSMGLAPLMVDKVFEVVRSIAAQGVTILLIEQNARLALEHADRGYVMESGEITLTGPARGMLDDPKVRAAYLGEVH
DQA
>AHV94554.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94555.1 oligopeptide ABC transporter domain protein [Bordetella holmesii ATCC 51541]
MRLIEPTEGSLCLGGKDVARVQGSALRPLRRRIQIVFQDPYRSLNPRRPVGESIIEGLLNFGTPRAQAQAAPPTCCAWWG
>AHV94556.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94557.1 CTP synthase [Bordetella holmesii ATCC 51541]
MTKYVFVTGGVVSSLGKGIAAASLAAILESRGLQVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIS
TKMRKVNNFTTGQIYESVLRKERRGDYLGKTVQVIPHITNEIQDFVARGADSAWQGHTDVAIVEIGGTVGDIESLPFLEA
ARQMSLRLGRNNAAFVHLTLVPYIASAGELKTKPTQHSVQKLREIGIYPNALLCRADRRIPDDERAKISMFSNVPLDAVI
SVWDVDSIYKIPAMLHQQGVDNIVCEALGLTPPPADLSMWDNLVDALEHPQHEVTIGMVGKYVDLTESYKSLSEALVHAG
IHTRSKVKIEYIDSEDIETRGTEQLQHLDAILVPGGFGKRGTEGKIAAIRYARENGVPYLGICLGMQLAVIEFARHVAGL
GGANSTEFDPSAPHPVVALITEWMNREGKVEKRDNASDLGGTMRKGAQRCPIKAGTLAQAIYGDEVNERHRHRYEVNNVY
VPRLEEAGMVISARTPTENLPEMMELPNHPWFVGVQFHPEFTSTPRDGHPLFSSYIRAALDGKTRRGEKA
>AHV94558.1 ketol-acid reductoisomerase [Bordetella holmesii ATCC 51541]
MKVFYDKDCDLSLVKGKTVAIIGYGSQGHAHALNLHDSGVKVVVGLRKGGASWNKAANAGLEVAEVAEAVKRADIVMMLL
PDENIAAVYRDEVHANIKAGAALAFAHGFNVHYGQVVPREDIDVIMVAPKAPGHTVRSTYSQGGGVPHLIAVYQDKSGSA
RDVALSYASANGGGRAGIIETNFREETETDLFGEQAVLCGGTVELIKAGFDTLVEAGYAPEMAYFECLHELKLIVDLIYE
GGIANMNYSISNNAEFGEYETGPKVVTDATRQAMRECLTAIQTGEYAKKFILENTAGAPTLTSRRRINAESQIEQVGGKL
RAMMPWIAANKLVDKAKN
>AHV94559.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MDVGLAFLRECLPSRLAPNIRAMVRMAEYSRSTLQGMRAELGIQYDHLERGILNFYRDPHEFETSQRAAGLMRDFGVERR
VVNADEVIAIEPALAPQRANIVGGDYTPEDESGDVHLFAVGLAQRCEAAGVEFLYSTRVTRLLSEGGQVLGVEIIQPDGR
YGRVQADAYVVAMGSYSPQLVRPLGVPCNVYPAKGYSATCPILNPAAAPTASLTDSSHKVVFSRLGNRLRMAGTAELSGY
SRELNSNRCVALTNLARELFPDALDFQGVSYWSGLRPSTPSNVPLIGRTRIANLYLNTGHGTLGWTMGVGSGRALADLLS
GRRPEPEFPFLGL
>AHV94560.1 competence/damage-inducible CinA C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSLQNNMGLAPAALSAATAMGLAEQLGPVLQEQGWYLGTAESCTGGLLSAAITSVAGSSGWFERGFVTYSNAAKVDALRV
SADTLNHFGAVSEEVALEMAQGVLLAAPACHVSIFTTGIAGPGGATTGKPVGMVCFGFATRAQEGIHSRAVTHVFAGDRS
QVRQAAVEFALRGLLEFLGAPANRC
>AHV94561.1 GMC oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MAKKLPEVDVVVIGMGWTGGILSKELAEAGLKVVALERGEHRAPAEDFSVPHIRDELNYSMRHGLMMDTRRDTLTIRNNV
KETALPMRRLGSFLSGDGLGGAGSHWNGHTWRWTDHEFKVRSMYEQKYGKKFIPPDMTVQDWGITYAELEPFYDRFEYVA
GISGTAGNVDGKHIAGGNPFEAERKRGYPLPALDRSYACELFEGATKKAGYHPFPMPTSNASKPYTNPDGSEFGQCQYCG
FCERYGCESNAKGSPLITVIPLAKKQPTFELRTQAWVTRIVMDKQKKTATGVEYTNLTNGEQLFQPAKLVILAAYALNNV
HLMLLSGIGKPYDPATGKGVVGRNYCYQTGAGATLFFDEGHIFNPFMSTGGLSTVIDDFNANWDFDRAEAGARFVGGYTV
SGGMYHGRPIEYHPVPGGTPRWGKAWKEAVQKWYLRAMSIGSSGSVMANRYNFLDLDPTYRNAFGQPLMRMTFDYKENEQ
RISAHAAKIINEISKSMNPTHLNEAKARMSWSVVPYQSTHNTGGTIMGTDPSMSVTNKYGQCWDAHNLFICGASLFGHNA
AYNPTGPVGALAYFTADAIKNTYLKHPGALLHA
>AHV94562.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MLTVKNLEAGYGKVKVLHGISLDVPKAKVVTLIGSNGAGKTTTMRALSGMIRPTAGEITLEGRSIAGQESFRIARLGLAH
SPEGRRVFPTLSVTDNLLLGAFPRLTGSRPRGDVQADLGRAMDLFPRLKERRDQLAGTLSGGEQQMLAMARAIMLNPQLV
LLDEPSMGLAPILVEEVFRIIARLKEQGVTMLLVEQFAAAALNVADYGYVLENGRISVHGPADQLKHDPAVVAAYLGGGH
>AHV94563.1 NAD binding domain of 6-phosphogluconate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MKIAILDDYHEVALSYADWSGLAADVTAFRDALPEGPGRAQVLQPFDVIVAMRERTAFPAELIAALPNLRLLVTTGLRNN
AIDMQACAARGISVCGAPGSADANTATAELAWAHLLALFKHLSQEDASMRRGMWQTGMPQPLSGKRLGVLGLGKLGQAVA
RVGQAFGMDVVAWSPNLTDERAAQVGVKRLDKNEFFSSCDAISIHLILSERTRNVVDDAALAAMKPSAYLVNTSRAGLVD
QDALYDALQKRRIGGAGLDVYPVEPLSPTDAVRDLDNVILTPHLGYVSQSNFEAFYRNAVKAVRAWMDGNPVQVLNG
>AHV94564.1 lyase family protein [Bordetella holmesii ATCC 51541]
MKHTLCLLALALGSATAGAQSPAPAPAATTTKTPAASTAKAAPAAKPPRDEFFWLGEINKATAVINTEQGLLDKALAPNV
AAGVAQVIEAGNQPGGKRPSSVITFEPLMIKAAGQDVTLLHAGRSSQDMHATYRAAILRENMLTLADQLNRSATTLVDLA
AKNVDTVVPNYTNGVAAQPNSYGHYLLGHAAGLARDAQRIREAYARIDRSPMGTTVLNGSSWPLDRKRMADYLGFGAIVD
NAYDAAQISSMDEPVEVASIVTAIGLHAGNFVQDIMPQYAQTRPWILLEEGGGNTYVSSAMPQKRNPGLLNSLRSDASTA
VTLAMGPIIQMHNITPGMPDPKEVDQNSAMVESATKVLKKWDRVMKALVINRDRALEELNSDWTASQELADVLMRKYQVP
FRVGHHFASEIVTLARSKNIKPLDFPYAEARRIYHEAVQGTKYPQDLPMSEAEFRATLDPVAIIKHRATTGGPQPAEMKR
MLKEARAQLADNAAWIKGKREHIDGSLARLDQDFNKLLPTGR
>AHV94565.1 moeZ/MoeB domain protein [Bordetella holmesii ATCC 51541]
MNDQQLLRYARHILLDDLGIEGQESFLAAKVLIIGAGGLGSPAAIYLTTAGVGHITLVDDDIVELSNLQRQILHTTASLG
RPKAESGRDMLATFNPEVEVRARVERLHGQTLADAVAAADIVLDCCDNFATRHAINRACVQHRKPLVSGAAIRYDGQIST
YDLRRDDAPCYHCLFPESDEVEETTCATTGVLAPLVGIIGAMQAAEALKLAAGLGQSLAGRLLQLDVRNMQWHSVNVPRD
PECPVCSHR
>AHV94566.1 CSS motif domain associated with EAL family protein [Bordetella holmesii ATCC 51541]
MAVGYPPGRWLRLVNGSPFVLERPALLAGTAGPGERHAIAVIDSQYLQDLLDSVAALSNHRIELKIDGGMTLASCPARDL
IYEPRAYGAQSASVSFMSQNVPVDIRIFSPASQV
>AHV94567.1 acyltransferase family protein [Bordetella holmesii ATCC 51541]
MKLLRFVLRALLVLPWLLFGLFCVSVVYRALSIARRAALNRFWSRWLMRLCGVRLTIRGEPRMQAAVLWAANHVSWIDIF
VVNAVRATSFVAKSEIRRWPVIGSLAAGAGTLFIERTQRHAVHAMGQSIHECFARGDAVGLFPEGTTTEGLDLKPFHASL
FEPARADGVDIQPVALRYLHHGKRSGFAAFVGEESLVANLWRVLGATGLAVDVVFLPPVATVREDGTPYTRLELSRLTRE
AILTQL
>AHV94568.1 tRNA threonylcarbamoyl adenosine modification protein YjeE [Bordetella holmesii ATCC 51541]
MSAPLAHLELHLPDEHATDALAEKLAPLVNGANGPAGGRIHLRGDLGAGKTAFTRALLRTSGIKGRIKSPTYALLESYKV
SNLYFYHFDFYRLSDTREWLDAGFRDLLRDDAVVLIEWPERAGAFLPVPDLEIALLHTEQGRDANLTAYTARGQTWLNAI
VPPIAAHSSHAPPRADA
>AHV94569.1 hypothetical protein D560_1218 [Bordetella holmesii ATCC 51541]
MEHRQGETSHLAVPALKWRGPNGPALSTTRLQTGPTPVFDSKHHAGGNGDEAS
>AHV94570.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>AHV94571.1 crossover junction endodeoxyribonuclease RuvC [Bordetella holmesii ATCC 51541]
MRVLGIDPGLRRTGFGVIDAEGSRLRYVASGTIVVPPDLALAQRLKVILDNLREVARETRPDVAALEIVFLNANPSSTLL
LGQARGAALCALAESGLDVHEYTALQIKKSTVGTGRAAKEQVQMMVQHLLSLNGTPAPDSADALACAICHAHTGPLQERL
SPMAKASRSGKSRIRNGRLLG
>AHV94572.1 asnC family protein [Bordetella holmesii ATCC 51541]
MDKTDFAILRALQQDGRASAQQLSDQVGLSPAPVWRRVKALESAGVIQGYSAQVDRSKVGLGGCVFAQISLERHSAETVA
NFERSVRDAPEILECYSVTGDSDFLLKILVESPEDYDRFLHRFLFNLPGIRQTRSIVALREIKHEVRLPL
>AHV94573.1 uroporphyrinogen-III C-methyltransferase [Bordetella holmesii ATCC 51541]
MAARWPGRGRLAGANPHQAEALLQEALATSAAPVAGRVVLVGAGPGDPGLLTLKALRALNEADVILHDRLVSPDVLALAR
RDAECIPVGKRLGEDHNATQSRIHALLVEHARAGRRVVRLKGGDAFIFGRGGEELEHLRAQGVDYEVVPGITAALACAAY
AGIPLTHRDHAQSLRLVTAHCRGDEDSLDWDGLARDHQTLAFYMGVGQLDNLSARLIAHGRAPDTPFALIENGSRPQQRV
VTGSLSQLARIAREQAIAAPALLIVGEVAALADKLAWFGASAR
>AHV94574.1 putative transcriptional regulator [Bordetella holmesii ATCC 51541]
MQLLLCGVDTCLEQTSSHQEIAAVLQALARRGAAQPVRGVPAARILPASPGGDTDAVPAERHWRLLEDGWVLASPDNAQM
PLSGTERALLLALVQAPTQRLSRDDLLNVVDVRPGRGEGARLRYVDVLICRLRRKATDRQLRLPIRAVHGWGYMFSGSE
>AHV94575.1 hypothetical protein D560_0268 [Bordetella holmesii ATCC 51541]
MDQAVLDSLQRWPNVPAVYGWLSLDKRGRWRLHPDQGEAQAITNKQILAFMDRNYSVDDAGCWFFQNGPQRVYVDLLGAP
LILRLDDRAQGLRSHNGLVIGAIKQWWLDEIGQLWADTDQGPGLVDDRDLQGVLQRLQLEDGRTLLDAESIPQAQQVQGL
GSQAALTMTEQSALASALGFVARPRLDGHC
>AHV94576.1 3-demethylubiquinone-9 3-O-methyltransferase [Bordetella holmesii ATCC 51541]
MTTAAHSSRPNINVDQAELDKFSALAARWWDPESEFKPLHAINPLRLEWIQATAGSLSGRRVLDVGCGGGILSEAMAQAG
ADVTGIDLAEKSLKIARLHGLESGVKVQYRAVPVEELATEQPAQYDVVTCMEMLEHVPDPASVVRACAALVKPGGWVFFS
TLNRNPKSFLFAIVGAEYLLRLLPRGTHSYEHFIKPSELATSARQAGLTPSGMRGMEYNPITQIYSLSADTSVNYLMATR
K
>AHV94577.1 hypothetical protein D560_2982 [Bordetella holmesii ATCC 51541]
MRLRPNVDFQQVLSRSLLDLFIRISLIGGLVYWCYRVAEPFIGLLLWSIILAVTLAPIHHRVTHWLRGRKKTAAVLLVIV
TLLAFIVPGALLAGSLAESLPRLFHHEEGQPTLRIPEPPDFVSNLPLIGHRVHDAWSQATDNVESALKPLQPALTATAKW
LLNSVTTAGMEFLIFLAAVAIAGLVLIYSTPSKRLADEIAGRIAGPQRGHELILLTASTIRAVAQGVIGVALIQSALGGL
GMLVAGVPGAGIWAIVALAVCIVQLPILVVLLPAAIYVFMYSSTPMAVGFAIWSVLVGLLDNVLKPFMLARGISIPLPII
LIGALGGVVAAGIVGLFLGPVGFALGYVLFMQWVREPIVGAELTSSDDSPS
>AHV94578.1 adenylosuccinate lyase [Bordetella holmesii ATCC 51541]
MQIADQLTQLNALSPLDGRYASRSDALRGLLSEAGFMAHRVEVEVAWLVALSDAGLPELPVFSAGARSRLAQLVENFSEA
DAARIKDIERVTNHDVKAVEYWLKERVADDAELARAAEFIHFACTSEDINNTSHALMLSRARDQVVLPRLRDVLAKLNTL
ALDNAAQPMLSRTHGQPASPTTLGKEFANVAARLARAIAAIEAVEPLAKLNGATGNYNAHLSACPEINWPEFSRKVLAGL
GLTQNRHTIQIEPHDWMSALFDAVARANIIVLDLDRDIWGYIALGYFKQRLKEGEVGSSTMPHKVNPIDFENSEGNLGLA
NAVLRHLADKLPVSRWQRDLTDSTVLRNLGVGFGYCLVAWDACLRGLNKLEVNTAAIDADIDACWEVLAEPVQTVMRRYG
LPQPYEQLKALTRGKGITEPALREFIAGLELPSDAKQRLLDMTPRSYLGLAVELAQTV
>AHV94579.1 hypothetical protein D560_0818 [Bordetella holmesii ATCC 51541]
MQGLIQARQVSELRTAYNGSYGASLLFKPDDQTYFVVLFQHKDFWRVIKTRNAAQAESTYRAFVARSSELAGIEIKRILL
QAEYNQAEQQLAARNAELASLQADQTLRQEQEQQVAARQEQSIQETRALTDQNKDVHQQLRALQRQIDTLQAEQMRINTR
RK
>AHV94580.1 pyridoxal-phosphate dependent enzyme family protein [Bordetella holmesii ATCC 51541]
MIDFAAIESARDNLRGQVQNTPFTLSRTLSDILQAEVWLKFENLQFTASFKERDALNRMLTLTPQERANGVIAVSAGNHA
QGVAYHAQRMKVPAVIVMLRFTPTVKVANTMRFGAEVVMAGDTFDDAKAHGFELARARGLTMIHPYDDEAVIAGQGTIGI
EMLQAQPDLDAIVIAIGGGGLISGVATAAKAIKPDIEIIGVQTERFPSMYAAVRGLTMDSGNYTIAEGIAVKSPGTLTQA
IVSRLVVNCQ
>AHV94581.1 polysaccharide deacetylase family protein [Bordetella holmesii ATCC 51541]
MRRRADRHRSLAAGLLAAAFSQTLAAPAAAVCEKPVYLTFDTGHMGVARHIAEVLKRQGVRATFFLANERTLTDGSSLDA
QWAPWWKTMAAQGHVFGSHTYDHVYWRGDLPDGRFRVRPSAGPDNGKTATWTAAQYCDEIKRSAKRFTEMTGKTLLPLYR
APGGKASPALLAAARQCGFAHVGWADAGFLGDELPSDKYPNTALLEQALRRIRPGDILLAHLGIWSRKDPWAPAVLEPLI
TGLKAKGFCFATLDTHPAYVSWLATHH
>AHV94582.1 hypothetical protein D560_1773 [Bordetella holmesii ATCC 51541]
MAFHRAAQHITLQRIGHAGVLIQGQVAHGLLQSSFLD
>AHV94583.1 hypothetical protein D560_0556 [Bordetella holmesii ATCC 51541]
MQARYLIHADDDQSYALYLNVMRPGKKIVPHNHTTWACIAAVDGVELNYTYDRLDDGSQPGRARLARSGTVVVGPGGGIA
LMPDDIHAVHIEGQDVIRHLHMYGRALETLDQRLAFDLENGTCQQMAIGVSTRR
>AHV94584.1 receptor ligand binding region family protein [Bordetella holmesii ATCC 51541]
MQGIQYAKKCLGVFATLAMVGSAVAADTPLRLGFIESITGPGAAYGEAHFKGTRLAVDMINADGGVNGKPIEIFAEDDKS
DPTVGINSAKKLITQRKVNVMAGSSASLVTIAFSRENEKAKVPLVVGVAGSPTITKQGYQHVWRVNVTDNQLDLKAVEHF
FKDGGKRRFAFLAENSDYGKPPTKSSADYIRSLGGEVVAYEEYNRGETDFKAQLSNIRKQNPEVLLVHGYYTEGSIIARQ
VKELGINAQLIVNMGQGVPKFAELAGAAAEGVVFPTNWAEGADPRHAPFEKAFKEKYGVNASAFDAAAYAAVQTIAEAAR
RGGGNGSADIQKGLPMLIGFETLLGPIQWDAANQNDGKVLLAKFERGQIIPAK
>AHV94585.1 formate dehydrogenase accessory protein FdhE [Bordetella holmesii ATCC 51541]
MQRILPRGEIESLDHTAIARLRQPERTTVFSARAARLRALAEDSPIADYLRLMADVADTQQSLLAGSHFEGPPVDRIELA
QAHGMPPLQAVAWERDPAWRGLLDQLLARVAALPTTAAAAREVCERWRDVLARDPQTVEALADAVLAERAVGVDSAAAPL
VMAALQVYWTDMACRFDPKAMPVASPFGVCPMCGSLPVASVVRVGGKSDGLRYLSCSLCSCEWHLVRVTCSQCQGTKDIA
YHNIEGRSEAIKAESCDSCHSYRKIFYQEKDLHVDPVADDLASLALDVLMGEAGYHRANGNPLLWHEEAAE
>AHV94586.1 dehydratase family protein [Bordetella holmesii ATCC 51541]
MSQSPKRKLPEELRSHRWYGVKDLRSFGHRSRTAQMGYHRSDYAGKPVIAIINTWSDINPCHSHFKQRVEEVKRGIWQAG
GFPVEMPAMSLSEPFQKPTTMLYRNLLAMETEELLRSYPADGCVLMGGCDKTTPALLMGAISMDLPTIFVPAGPMLRGNW
NGVTLGSGSDTWKYWAELRAGNITEQDWQGVEDGIARSPGHCMTMGTASTMTAAVEALGLCLSGYSSIPAPDSRHAQMAS
LTGKRIVEMVWEDLKPSDFLTEASFDNAVRTVLALSGSTNAVVHLIAMARRSGFALDLERFDALARSTPVLANLRPAGKY
LMEDFFYAGGLRAMLVQMADLLDLTQGSVDGRTLGENIAAARVFNDDVIRSPDQALVPCDGLAVLRGNLAPDGAVIKPAA
MLPSLQVHTGPAVVFKDYNDMAEHIDDPDLDITADSVIVLQNAGPQGAPGMPEWGQLPIPQNCSSKACVTWCVSRMPA
>AHV94587.1 thiamine biosynthesis protein ThiS [Bordetella holmesii ATCC 51541]
MQITLNGQTRELPAATTVLGLLDTLGYTGKRVAVERNGEIVPKSKHADTPLTPGDQLEIVVAVGGG
>AHV94588.1 heavy-metal resistance family protein [Bordetella holmesii ATCC 51541]
MWIPGLGPLSKAQVASLKLDAKQQALFDKARDASQQAMEARRQAGPAPHELLQAQLNAGKLDPYALAAEGDKRRAQFESQ
ETALRTQWLAVWDSLNDAQRAQVTQIVKERVAKMKEHHGKRGEHRSGRPGKPPAPLPPPSNPIPRNDQPGRWPGFFMARH
SGAHSRKFHQYNAAAASPIRCRTAWVRGPGTDIGQGTFKKPGMKNA
>AHV94589.1 protein RecA [Bordetella holmesii ATCC 51541]
MDDKTSKAASEKAKALAAALSQIEKQFGKGSIMRYGDNEVEHDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKT
TLTLQVIAEMQKIGGTCAFVDAEHALDVQYASKLGVNLADLLISQPDTGEQALEITDALVRSGSVDLIVIDSVAALVPKA
EIEGEMGDSLPGLQARLMSQALRKLTATIKRTNCMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKK
GDEVVGNETRVKVVKNKVAPPFKQAEFDIMYGAGISREGEIIDLGVAANVVEKSGAWYSYSGNRIGQGKDNVREYLKEHK
AMAIEIENKVRENQGIVSRAAEFAPSAEERSED
>AHV94590.1 chromate transporter family protein [Bordetella holmesii ATCC 51541]
MLETRAPPMTAMTSEVDSGRQRPTCGQLFYGFFRLGISAFGGALPLARRMLVKKERWLTENEFTDLLGLCQFLPGGNIIN
LSVAVGARFHGPRGALAALMGLILAPSIIVIMLGSVYQRYEGDPHIQHMFAGLAAAAAGLLISMAVKIARPLRGNWPGIA
IALACFAAIAVLRLPLLPSMMLLTPLSIFLTWRRRR
>AHV94591.1 tRNA threonylcarbamoyl adenosine modification protein YgjD [Bordetella holmesii ATCC 51541]
MHQEYGGVVPELASRDHIRRIVPLTREVLERAGLQRRDIGAIAYTAGPGLAGTLLVGASVAQSLAWSLGLPAIAIHHLEG
HLLSPLLADPRPDFPFVALLVSGGHTQLMRVDGVGRYTLLGETLDDAAGEAFDKSAKLMGLGYPGGPALSRLAEQGDASR
FELPRPMLHSGDLDFSFSGLKTAVLTRVKAATQNGALDEQSRADLAAATQAAIIDVLAAKSIRALKASGLRRLVVAGGVG
ANKLLRQRLGEALPRMRATAYFPPLELCTDNGAMIAFAAAERVKAGLADLAEGDHAFTVRPRWDLDELQAA
>AHV94592.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MHTAPVLEVENLKTQFFTRAGVVKAVDGVDLHLQQGEILGLVGESGSGKSITGFSLMGLLDEPGRVVEGAIRLEGEDLRQ
ADARRWRALRGSEMAMIFQDPMMTLNPVLRVDTQMVEAVQAHHDVSRSKAMARALEVLTMVGIPSPRERLRTYPHELSGG
MRQRVAIAIALLNSPRVIIADEPTTALDVTIQAQILYEVRRLCRETGTALIWITHDLAVVAGLADRIAVMYAGRIVETGS
TEDVIEHALHPYTQGLMASIPSARLRGQPLAQIPGMTPSLLNLPEGCAFRQRCPRATEACLREPQLQSLQPGHEVRCWHA
GPA
>AHV94593.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MIELSVEDLHLDYGDNPVLKGVSMDLRQGEVVSLLGPSGSGKTTLLRAVAGLEGPKAGRIRIGERVVYDGGSRQEVPAED
RNLGLVFQSYALWPHKTVYDNVAYPLKLRGVPGSEVRQRVADVLEQLGLGKLGQRHPHQLSGGQQQRVAIGRALVYSPPV
ILLDEPLSNLDAKLREEARTFLRELIVRLGLSALMVTHDQSEAMAISDRILLLNNGKIEQQGTPQEMYSTPATLFTAEFM
GSNNRLEGRVVELRDGRARIEGAGWTLWGRAAEGVSAGQDATAVIRVEQLRLQDDADGNHLDLPLTTSMYLGDRWEYLFR
AGGSDGLSLRAYGPQGREAGKYRLALPADSLWIFPRS
>AHV94594.1 coproporphyrinogen III oxidase family protein [Bordetella holmesii ATCC 51541]
MSVDISAVKHYLLDLQSRIVSALEAAGGEALRSDNWQRPEGGGGLSRLIEGGRLLERGAVLFSHVTGSRLPPSASAHRPE
LAGRSWEAMGVSMVLHPRNPYVPTTHMNVRMFVAKARPDHDEQDVFWFGGGWI
>AHV94595.1 putative major fimbrial structural subunit FimA [Bordetella holmesii ATCC 51541]
MSECPAAINGQNVHIYFEPGHTTDYDSHTLIPYQLATAATPIPQAGVGATRLDHLRIELAGLDGVQIPMGSTPDMQKAIA
GNTFRVTDNKADARFIARYKRISDGAIAASHVGTTVQFSVMYP
>AHV94596.1 ftsK/SpoIIIE family protein [Bordetella holmesii ATCC 51541]
MPDPIVIAKNAKTELALLPALANRHGCITGATGTGKTVTLQLLAESFSRIGTPVFLADVKGDLTGIAQTGAASSKLTERL
SSLGLPEPVWGASPVALWDVFGEQGTPVRATVSDMGPLLLARMLELNPTQEGVLALVFKVADDEGQLLLDMKDLRAMLQD
VTDRAAELKVRYGNVSAASVGAIQRALLQLESQGADHFFGEPMLDVADLMRTDARGHGVVNILAADKLMQAPRLYGVFLL
WLLADLYEKLPEAGDLEQPKLVFFFDEAHLLFSDAPGALLNKIEQVVRLVRSKGVGIYFVTQNPLDIPDSVLGQLGNRVQ
HALRAFTPRDQKAVKTAAQTMRPQSGLDIEAAITELGVGEALVSLLDAKGRPTPTQRAWILAPGSRIGPASDSERAALRR
DMPLAAKYEQPVDRESAYEKLHARAQATAPASPSAAPPPAATQGDSLTGGLLKGLNDVLFGSTGPRGGKRDGVVQTAAKS
ALRQASRDLVRGVLGSLLGSRRR
>AHV94597.1 pseudouridine synthase family protein [Bordetella holmesii ATCC 51541]
MQDDNSTVDQAPSAEQATAATPEGEGGGRSRGRKLRTPFRRRRADAASEENKDATPVAESAPAEAPRGGDNARQAEREAD
EALSYLDKAARSEQRLGKYLNSEAIMPKLHKVLADAGVGSRREMEELIVAGRVSVNGEPAHIGQRVAANDQVRVNGKPIS
RPNAKKPPRVILYHKPAGEIVSHDDPGGRANVFARLPKLRTGKWLSVGRLDLNTEGLLIFTTSGDMANRIMHPRYGTERE
YAVRVLGEMDEAQRNSLVEGIDLDDGKAAFGSFEYLGGDGSNRWYRVTLQEGRNREVRRMFEAVGVTVSRLIRTRFGDLV
LPRSLRRGRWEELDASLVSALMVQLGLLREDDESGGRRGKSRQPQSHDSALPPGFGTMEHNGMNGARIGHRGKLQGGRVG
ASAPCPSDPFGTGLMFTGGYANGHPLGNDAGGKGKPAGAAKGRGRKPAAAAGGSSAAAAAGGAAKPAGSRGAKRPAGGRG
KPGANAAAGAAAAGRPAGGKPVGAKPAGNRSAAGKSAAGPKPAGKGAGRPKSAAPKPAGGNKSRPRRSGEGRGDDWQPKG
AAAHESRLGVMGGRGGRGDR
>AHV94598.1 thiol reductant ABC exporter, CydD subunit [Bordetella holmesii ATCC 51541]
MVQAWLLAHVLHEAIVVQAPRAELITPILSIALLILLRACLGWVGERAGASAAESIKRQVRQALFARLLANGPQWSRERA
SGELASAMLEQVEALDGFFAKYLPAMGAAAVLPVAFSVAVLPFDMVSGLLLLVTAPLIPLFMALVGWGAESASRRHLQAF
GRLSGFFADRLRGLSTLKLFGRAQAEAQTVVEASEALRRRTLSVLRIAFLSSAVLEFFAALGVAGVAVYIGLTYLGYIDI
RFTPLTLQAGFFCLLMAPEVYAPLRQFAAHYHDRGTARAAVHQLHAVFGDLASEPAVPATPQPAQTSAVAASLSARRLTL
RMPGRPQAVLDGVSLDLHPGEHVALMGASGAGKSSLLQAVSRLGLVPEGEILLDGHALAHWDEAALRERVAFIGQRPYLH
AGTLADNIRLARPGADDAAVQEAARRACVLEFAQTWPEGLQTWLDGRGQGLSGGQAQRVALARLFLRDPALILLDEPTAH
LDEATQERVLHEILAFAQGHTLIVATHASAVVRRLPRCWHLANGHLEAR
>AHV94599.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MYKAIPLAAAVLALAGCAVGSGPDGGALSQDMQAQVPVKAAYDAAVAQAERCLVGQGGYRVDGRLDGGSAIMRVLAPFGD
NEMARVQITGTGPSTSSVHINMWGRSIWNADAMRAMKEAITFGVPSCVAYMPGDPQPKEEVWKRPQPR
>AHV94600.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94601.1 putative transmembrane protein [Bordetella holmesii ATCC 51541]
MEQWLLDSVHWMLAALALPSVGLPAVFLICLLSATLLPLGSEAVVFGFIKLQPDLFWPTVVVATLGNTAGGVISYAMGFG
AQRAFERWREKHPHAPQEQGGFSRRMAGRWNTHARQWLHRLGPAALLLSWLPGWAIHCVLWQAGCGCPSGLAWPIWRQAS
CCAMPC
>AHV94602.1 DNA-binding response regulator [Bordetella holmesii ATCC 51541]
MRILIAEDDSILADGLSRSLRHNGYAVDAVRDGLAADSALAAQPFDLLILDLGLPQLTGLEVLRRLRARNSVLPVLILTA
ADSVEQRVKGLDLGADDYMAKPFALSELEARVRALTRRGAGGGATVIRHGRLVFDQTGRVATVDEHTLDLSAREVSLLEI
LLARSGRMVSKTQLVDHLCEWGEEVSTNAIEVYVHRLRKKLEPSGVKIITVRGLGYCLERDQGAAAYPLAS
>AHV94603.1 telomere recombination family protein [Bordetella holmesii ATCC 51541]
MLSTTLIPRDEEDALNDPEDIGLRYAHELAAVIDAGACAQHPTTVIDLTGDEPVVLRRGRGDPQALGLS
>AHV94604.1 isochorismatase family protein [Bordetella holmesii ATCC 51541]
MKQALLFIDVQESFRQCPFWDETELTVFARNAQSLVDAAQARGIDVLQVFHVNTTNPESVFAPESGYVRTLAEVRVTPTA
IFHKNVHSALFARDAEGNTLHAWLTGHGIEEVIIAGIRTEQCCETTARHASDSGYKVRFVTDATLTFAMQSPAGTAYTPA
QIRDCTELVLATRFARIVPAARALED
>AHV94605.1 calcineurin-like phosphoesterase family protein [Bordetella holmesii ATCC 51541]
MSSRPVSFLHTADWQIGRQYGQFDDDDGAVLAEARLETVARLAGLAHERGVDAVLVAGDVFDTQAVSDRTIRRLFAALQA
YSGPWVMIPGNHDAALADSVWTRAQQLGCIPENVSVALQAGVIELPGMAVLAADLTQRHTYDDVTRVFDGLASPPGLPRV
GLAHGSVAGRLPESADAANPIAADRAERARLDYLALGDWHGCLRVGERCWYAGTPAPDRFRGNEPGYVLHVRLQGGAAEV
EPLKVGRYRWQAWTVALSVEADAETLAVRLEELRADDVLRLTLTGTVSLAAWERLAQVIGQAQARLRALRLDQDALTLEP
QETDFAALDGGGYVGDVAARLRAMQAQSDPQGAQVARDAMRILMRMARDGSAP
>AHV94606.1 lactoylglutathione lyase [Bordetella holmesii ATCC 51541]
MRFLHTMLRVGNLEKSLDFYTNVLGMRLLRKKDYPDGRFTLAFVGYQDEDEGAVIELTHNWDTEQYDLGNGYGHVALEVD
NAYEACDKVKAKGGKVTREAGPMKHGTTVIAFVEDPDGYKIEFIQKKGRAD
>AHV94607.1 methylated-DNA-[]-cysteine S-methyltransferase family protein [Bordetella holmesii ATCC 51541]
MTPHQTDLDPRWAAVLARDPHADFVYGVKTTGVYNHPANPARLPRRENVEFFASASLAEAAGYRPSHIQSRVSLAHASWV
AQACHRLETADPLPSLRELAAEPGVSSYHFHRVFKAATGLTPRAYAQAHRARRVRGQLDRGERVTTALYAAGFQSNSRFY
ASADSMLGMKPSAYREGGANARLYFALGQCSLGAILVAQSERGVCAILLGDDPEALLQSLQDRFPNAELIGGDPGYETLM
ATVVGMVEAPAAAVDLPLDVRGTAFQERVWHALTQIGPGQTVSYSDIAQRIGQPKAVRAVAQACAANMLAVAIPCHRVVR
NDGSLSGYRWGWHASANCCAANRARRHSHEGAAGAARRARLGATGAKTGRPGL
>AHV94608.1 cobW/HypB/UreG, nucleotide-binding domain protein [Bordetella holmesii ATCC 51541]
MAARYVYRGAIAVVDAQHLLEQLAVAAPSAAQPEAASQLALADVVAVSKADLVGAPQLEAVREAVAAVHPGVRTVALARQ
GAVPAELTDIALQAERSEAASVGRWLSAYGAHRRLGRHAGVSPFVLELVMPPSRGQFSAAMHDIQARYDRGLLRIKGLVC
FVGEAAPCVVHGVHRQLYPLEPLAQWPDECRNSRLVFIVRGLDPDEVADFASQALGQRQAHRPLSK
>AHV94609.1 phosphonate ABC transporter, permease protein PhnE [Bordetella holmesii ATCC 51541]
MTSALLTQPEDGHRTWQRYSAGQRLLRFMLYLLVVAAVVQAMRGVEIIPEFLYDAPQQMGDLFTRMWPIDWAFYAEGVHG
PLIETLHIATLGTLISVLLAVPVGLLAANNLTPSRILNQLARLILVSSRSVNSLVWALLFIAIFGPGALAGILAIAFRSI
GFVGKLVGEAIEQAHRGPIEALTASGASRSAVLWYGYWPQIRPAFWSIVLLRWDINVRESAVLGLVGAGGIGMVLDTALN
LFQWDRVALVLVSIFAIVVVAEIVITQARKHIL
>AHV94610.1 L-seryl-tRNA selenium transferase [Bordetella holmesii ATCC 51541]
MSARPATPGDLPALDRLLGQSVYAPLQQRYGRSQVVATLREQLQQLRERAQAGGLDHAELEPAALATVTEQTLAARNAPR
LRAVFNLTGTVLHTNLGRALLPDAAVQAVVRALTQPANLEFDLETGARGDRDDLIENLLCELTGAEAATVVNNNAAAVLL
MLNALADRKEVIVSRGELVEIGGAFRIPDIMKRAGARLVEVGTTNRTHPADYSNAIGPRTAMLMKVHCSNYAVSGFTKSV
SVAQVAALAHAQGLPATVDLGSGTLLDLTQWGLPREDTVRDTIEAGADLVTFSGDKLLGGPQAGLLVGRADLIRKIKKNP
LKRALRVGKLTLAALEPVLALYRAPEMLAERLTTLRLLTRPQRQMQLQAERLRPAMQHAVGPEFGVEGAPMFSQIGSGAL
PIDQLPSFGLAIRYLGRGRPGRHLERLQSSLRGLARPVVGRVDDDVFWLDLRCLEECDEAEFASQLSEPLA
>AHV94611.1 bacterial extracellular solute-binding s, 5 Middle family protein [Bordetella holmesii ATCC 51541]
MRCGLVVALAACGLSSSAWAEDRQMLRLSSGAADNATLDPHRATSTADKGVAAEMFNALVRFPPGSADPKALEPDLAERW
ESSPDSKTWTFHLRKGVKFHGGYGELKADDVVYSIQRAADPNRSSFAAAFGLIDKVEALDDHTVRFTLKYPDAAFMGRVS
NYHGGNIVSKKAAEKLGDKFGAAPVGTGPFAFGEHVTQQYVKLVANDEYFRGKPKLAGIMYRMIPSDSARELAFTSNEID
VMQGKREQRWVERSGKRGMQVDIFEPAEFRTLHVNRNIKPLDNLKVREAIAAAINVDEIVRYAGKDVADKGCSVVPNGYL
GQDYGVGAYAYDVERAKKLLAEAGFPNGIQIKSVVSNISAQQPIMEIVQAQLGKAGIKLDMEVVDHATYQAKSRQDLSGL
VFYGAARFPNADTYLTEFYDSAAAIGAPGAMSNFSHCAVVDEPIRQARVEPDAQKQLALWKDAQAKIRADVCAVPLFGLK
QVWVHSDRVKYGYKLDGALNLQPPVTEVTTVTAP
>AHV94612.1 phosphoglucomutase/phosphomannomutase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MRQWRGRAVAPQLFRALGCDVTELFCEVDGNFPNHHPDSADPHNLQDLIDCLATTDCEIGLAFDGDGDRLGVVTKSGQII
WPDRQLILFARDVLQRCPGQTIIYDVKCSRHVGLAVEQAGGKPLMWQTGHSLVKAKLAETGAPLAGEMSGHIFFKERWYG
FDDGLYTGARLLEIISRESDPSALLEALPTAESTPELKLEMEEGQPHALIRELQAHGRFDDATQLITIDGVRAEFTDGFG
LARASNTTPVVVLRFEAENAAALARIQTLFKRELLRLAPQARLPF
>AHV94613.1 dimethyladenosine transferase [Bordetella holmesii ATCC 51541]
MSQHQARKRFGQHFLTDESVVESIVRAIAPARDDAVVEIGPGLSALTAPLLEKLDTLSVVEIDRDLAARLRKKYPPERLV
VVEADALTVDFGQFGAGMRVVGNLPYNISSPLLFHLMSAADLVRDQHFMLQREVIDRMVAEPGTADYGRLSVMLQSRYRM
EKLFDVPPEAFDPPPRVVSAVVRMIPLGADRPRPVSAAAFEAVVARAFSQRRKMLRRGLGDWAAHVPWEAVGVPPTARAE
EIGVAQFIGLTDALVNAGVVKG
>AHV94614.1 transcriptional Regulator, LysR family domain protein [Bordetella holmesii ATCC 51541]
MGFQASDLTADRRLGDMQVLRRLRDAHAARDGHKTAHKIERWQFSEGEWHSKNSCHEAVKVA
>AHV94615.1 aminopeptidase P, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MSLPADDISAFVARRRRVLDWMQAQGGGVAILATAPQALRNRDADYPYRHDSDFYYLTGFIEPEVWLILIAGADTRAILF
CRARNEAHEIWEGVRIGPQAAAARFGMDDAHPVDSLDELMPQWLLDQPNLWLSQTANAAVGNRVQSWMQAARDQARFGAR
PPSAQRDINPQLAEMRLIKDATEIAAMRRAARISAGAHARAMRAVRPGMHEYELEAELLYEFRRHGAQGVAYNSIVAAGA
NACILHYQAGDAVLRDGDLVLIDAGCEYDSYASDITRTFPVNGRYSGAQRALYDLTAAAQQAAVAATLPGNNWDDGHQAA
LRILAQGMLDERLLRGSLDGVLESGAYNRFYMHRTGHWLGLDVHDVGDYRDPCNCAGTPGPWRRLRPGMMLTIEPGIYVR
RADDVPAKFWDIGIRIEDDALVTETGCELLTRGVPVDAREIEALMRE
>AHV94616.1 AIR synthase related, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MSLVQHLPGSSVLSSFRRERLLTQLKKAGLPVADISARYEHFVQTDKALSAEQQTHLVQLLDYGTPVAGEPAAKGLALLV
IPRLGTISPWASKATDIAHNCGLDSVHRIERGVRYLITPERGLLGSKSFDADMLARAADCLHDRMTETVVQADFDGQALF
TPLAGKPMRTVAVKAEGRAALEAANTSLGLALSEDEIDYLTKAFGDLDRDPTDVELMMFAQANSEHCRHKIFNADWVIDG
QEQPNTLFGMIRATHKAQPQGTVVAYSDNAAIMEGGPAQRFQAGLPGQAGEGAEGARYVRRDAIMHTLMKVETHNHPTAI
APFPGAATGAGGEIRDEGATGRGSKPKAGLTGFTVSHLRFDDALQSWEADHHGLPDRIASPLSIMIDGPIGGAAFNNEFG
RPNLLGYFRSFEQTAGGTRWGYHKPIMIAGGLGSIDAGLTHKDPLPPGALLMQLGGPGFRIGMGGGAASSMSVGSNSAEL
DFDSVQRGNPELERRAQEVIDRCWQQGAENPFWLSTTWGQAAFPMPSPSWSTMPGGAPRLI
>AHV94617.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV94618.1 ribosomal protein L27 [Bordetella holmesii ATCC 51541]
MAQKKGGGSTRNGRDSESKRLGVKVYGGQQIQAGSIIVRQRGTRFHAGVNVGIGKDHTLFALADGKVKFGTKGAMNKATV
WVESAN
>AHV94619.1 prokaryotic cytochrome b561 family protein [Bordetella holmesii ATCC 51541]
MTALLVALAYLAIEIRGPKGDPSRPFWTGMHEWAGCLVLVAAMIRIGWRARHEPPVDLNESLLLSILARLAHLALYIFLL
AQPLLGMLTLNLADRPVTLIGLDWSFRIAAPNPEWRPLVKESHELMGNLFYFVIGLHALAALWHHYIKRDDTLRRML
>AHV94620.1 hypothetical protein D560_3403 [Bordetella holmesii ATCC 51541]
MGFVRFLDQGKDLDHACRIWRPKRIYAGVGACGERPAADGQAA
>AHV94621.1 efflux transporter, RND family, MFP subunit [Bordetella holmesii ATCC 51541]
MLRPEVAGRIQKIDFKEGESVAGNQVLIRLDDSVPAAELQQARANLALAESQYRRAVDLYGRGFVSQQARDESASTLKIQ
QAAVALAQAKLDKMTIRAPFAGMVGLRNVSVGDYVNQGQDLAPLEAIDPLKVDFRVPEMYLSKVKAGQTLGVRLDALPGQ
ERSGQVYAVSPLVDAGGRSILLRATVPNTDHVLRPGMFARVQLQFGQDRALAVPETALAPVGQSQYVYRVREGRAEKIEV
GVGERREGRAEILTGLAAGDQVVIAGLQRLTDGAPVSIVNSAAK
>AHV94622.1 histidyl-tRNA synthetase family protein [Bordetella holmesii ATCC 51541]
MGNWLLPEGLADVLPAEARRIEELRRELLDLYRTYGFELVAPPLVEYIDSLLSGMGSDLNLYTCKLIDQLSGRTLGVRAD
MTTQVSRIDAHLLNRESVTRLCYCGSVLHARAADLLSSRELLQIGAEIYGHAGFEADLEIVQLVLETVGIAGVSRPRLDL
SHPGVVKALFDADPAAAAKADLIITLLREKDVAGLAELEHAEPALQATTLRGLALLPRLYGQIDVIARARQELPALPALV
AALDELERLARAVPDVALGLDLADVGGYGYHSGVTFALYAEGWHDALVRGGRYDDVGRAFGRARPATGFSLDLRKLAAGL
TPAEPGRAIRAPWGQDPALTGAVRALRQSGEIVVQVLPGHEHDQDEFVCDRELALQDGAWTIKAL
>AHV94623.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MRIAHIITGLGQGGAESVLYRLASYTDTSTRHVVISLTDEGVYGARLRAAGITVHALGMPRGRVTLSGVLALRRLLLAEA
PDAVQTWMYHADLIGGLAARLSGIKAVAWGIRNSGNHLDRSSRSARLVLRACAALSGWIPRAIVCAAQDAAQRHQALGYR
AQNMVVIPNGYDLSRYAPDPDAGARLRTLWGLSAQTPLIGCVARWDPLKDHRNLLAALSGLVHQGQDLKCVLVGRGMTPG
NSALVAMIEAQGLEGRVLLTGPSDDVATVMNSLDLHVLSSCAEGFPNVVAEAMACGTPCVLTDVGDAAHIVGDTGVVVPA
EQPEALARGIAQALEDVARRGRTVVGGAARERVLALFDLGRMVQAYETVWRRIAGER
>AHV94624.1 hypothetical protein D560_3864 [Bordetella holmesii ATCC 51541]
MTTPIKAHGFTNEVLEWKAWLDTVNVEQATAQQIAVLEESHPKAKTSDYYLFLIHQPEILRQRSTAFNAIMYAPGGLSRA
ERELGATVVSRVNGCVYCASVHAQRFEQLAKRTDVIAEVFENPRRAGTTPRERAIAEFSVKITEHSAALQASDIQALKDV
GLTEGEILDLLHADAIFAWANRLMLNLGEPVFAQP
>AHV94625.1 DNA-binding response regulator [Bordetella holmesii ATCC 51541]
MRILLVEDNPDLGDAVESKLRNAGHSVRWVRDGLAAVQWGGAQAWDAVVLYITLPGKDGYAVLREWRAAGLEAPVLVMTA
RAEIEDKVDMLDLGADDYLVKPFDLRELEARLRALMRRPTGQTSSVVVLGDLSLDMSGRTVTINGQLLELGRREFRLLEI
LLTRQGQTVAKERLMAQLFDAEDISLNALELLISRLRKKLSTACIEIVTVRGVGYQARTDAST
>AHV94626.1 hypothetical protein D560_3446 [Bordetella holmesii ATCC 51541]
MDSKLRGQYGNLTEYTQYFWRNAQGRDNTFFKATVKDVAQGVIAVELHTNQYFTGAAHGIPATLYLNWQIAGGRLLHLDD
LLIPGRRPAYDKVLQQAHRKWLATNEDAKHDPAAYDKMWPFQVTDNIAVTREGLVVKYDAYSIAPYSHGEPELLLPWSEL
RGVVKPEFLLSPS
>AHV94627.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MAVFSRTSRRLAASAALIAVGAVGCSELDSWQRQAIFAPQAEQQHWWREPPAGTDVFDLPLAGGEAIRAWYWPSPLPNAP
AVLYLHGARWNLNGSAFRMEAWTKLGYSVLAIDYRGFGASSPRLPSERSALQDAQVALRELARRQPDPARRFVYGHSLGG
AIAIDLVSQPSQPEIAGLIVESSFTSIAAMMTQYKWGTVPGASWLVTQPFDSLGKLARLSTPLLLLHDTADRVVPDHMSD
ELYAAAVNVPPPLRRLVKIEGGPHSGGVRSGIRYNRAVADFVRGAGHARRLADQPLSG
>AHV94628.1 ribosomal protein L9 [Bordetella holmesii ATCC 51541]
MQVILLEKVVNLGNLGEVVRVRDGYARNFLIPQKKARRATEAALKEFEARRAELEKVQAEKLAIAQALGERLSGHQLKIV
QKAGVDGRLFGSVTNADIAEGLRAGGFEGVEKSQVRLPNGQLKSVGEYPVQVALHADVLVDVTILVEGEMN
>AHV94629.1 hypothetical protein D560_3352 [Bordetella holmesii ATCC 51541]
MFPFFRSVPHGARLLWLTAVLFVCYLCIGMSFPVVPVYVADTLGLDNFWAGLAAGSAFLATIFTRTYAGGLADRVGVKPV
TVRGLLIYMLGIGLSWTASLSSHWAAFAVLLAGRVLLGLGESLVAVGVVTWGIALVGAASSGRVLALIGAAMYGALALGG
PVGLALFAHLGFGGVMLAASVLPLIALVGTLSLPGSPLQAAGARRGFLPILGRIWPYGTVVCLQGIGFAAIGAFFALHFL
QRHWEYAGLGLTAFGAGFVLVRLVCGHLPDRVGGLPVVMASLAVEAAGQLMIGLADSPGMALAGAFLTGLGCSMVFPSMG
REVVMRVEPAQRATALGAFSAFQDLAYGLTGPLAGLLADRSGYGHVFLIGALAAAAGLMLAMGLRRRQSAAR
>AHV94630.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQVRIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGPAGTSSSWPSMTTPAWPSPTSTPTSASPAPSSSSRTQWPTTSAWA
>AHV94631.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV94632.1 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MWAAQYLRFDRPGHWLTSGGAGTMGYGLPAAIGAQIAHPDKTVVCVSGDASVLMNIQELSTAMQHCAPVKVVLCNNGYMG
MVRQWQELIHGGRYSHSYNASLPDFVALARAFGWGAARVEHPDELDAALAQ
>AHV94633.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MPQQAQRWIDAFELGAIANSYPGQISGGQKQRTALARALAAEPDLILLDEPFSALDAQLRGKMRWELRQLLDGLPVPMML
ITHDPADIDALGDAVFEVRDGRIAGHKRPASAV
>AHV94634.1 tonB dependent receptor family protein [Bordetella holmesii ATCC 51541]
MGGGINTQSKSSDFGYYGRTQGGYTTLDARVGYQVNERLDLGLNIYNLTDKKYYSSISYDHNFYGAPRSFLLTARYRM
>AHV94635.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MTAHAGHKQLIIAGGGSKRFYGNTRQPGSAHYVLDMTAYRGIVNYQPSELVVTARAGTPLAELEAVLAEQGQMLAFEPPH
FDSGATVGGCVAAGLAGPRRQACGGVRDYVLGVRLLDSQGHLLSFGGEVMKNVAGYDVSRLMSGSLGMFGALIDVSLKVV
PKPVCELTVHGQSTQQDALALFARWRRLPLPVSATAWVPDGGGSDGGGWLARLSGSAPALRAARAQVGGKELEPAVACSA
WQALREQTHAFFQGGVPLWRLAVSPTAPPLRLGPMLLEWGGGQRWLSARADAQAVRAAAQEAGGHATLFRAHGGPVPADG
VFHPLSPGVAQITRRLKQELDPAGLFNPGRMVLEL
>AHV94636.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MTVASPTPPSKVLLDVNGIEVIYNHVILVLKGVSLRVPEGKIVALLGANGAGKTTTLRAVSNLLKGERGDVTKGYIQYRD
ERIERLSPAELVKRGVVQVMEGRHCFAHLTIEENLLTGAYTRELSRGDISIALERVYQYFPRLKQRRGSQAGYTSGGEQQ
MTAIGRALMASPNMILLDEPSMGLAPQIVEEIFEIVRDLNQREGVSFLLAEQNTNIALRYADYGYILENGRVMMDGAASD
LAQNEDVKEFYLGISSGERKSFRDQKFYRRRKRWLA
>AHV94637.1 N-terminal domain of DJ-1_PfpI family protein [Bordetella holmesii ATCC 51541]
MKILMVLTSHDELGNTGRKTGLWLEELAAPYYAFKEAGAQVVLASPKAGKAPVDPLSQDETYQTDDSRRFENDALAQAQL
ANTERLDSVSSDQFDGVFYPGGHGPLWDLAQDPTSIALIESFLAANKPVALVCHGPGVLRNAKAANGQPLVQGREVTGFT
NSEEVTAGATDIVPFSVEDELKAKGGKFSRAADWTPHAVADGLLITGQNPASSHATAALLLKQLAGASAKA
>AHV94638.1 dihydrodipicolinate synthetase family protein [Bordetella holmesii ATCC 51541]
MSSVVQTETATAVATPVSFHGVWLPLVTPFHEDGPDLFALRRLMRHYLQTGIDGVVVCGSTGEAAAMDEYEQLAVLDTVL
DEAGPLPVVMGLAGNHQREVLRRQAVFTSRPLAGLLTPAPYYVRPGQVGLADYFRALADASAVPLILYDIPYRTGAQIET
STLLALAEHPNIRAIKDCGGSCARRSLRGHVPGHAGAAGGRGASNFPCPGADDPHGLRGTEPGATEGVAGTPGLDA
>AHV94639.1 carbamoyl-phosphate synthase L chain, ATP binding domain protein [Bordetella holmesii ATCC 51541]
MRVVESSGTFLDALASCQREARASFGDDRVLIERYLQKPRHIEIQVFADSQGQCVYLFERDCSVQRRHQKVIEEAPAPGM
TEQRRQAMGEAAVAAAKAVGYVGAGTVEFIVEPDGRFYFMEMNTRLQVEHPVTEMITGLDLVEWQLRVAAGEPLPLTQQA
LQIDGHAIEARIYAENPEKGFLPSIGTLSYLALPPHTAFANGDIRVDGGVRMGDTITPFYDPMIAKLIVRGADRDQARAR
IVQALARTQAVGVQTNVAFLTRLMQDDAFAQADLDTGLIERRRCSLLPDAQPASLESLALASVAILVKEGLANDAQRSTA
ASDPWNARDGWRLSGHYRRLLSWDDQGQIREVILQRNAAGWSLSAGDTPVTLQWRAHPSANPELAYDLRLSLDGRDVSGN
VVLHGERAHIFRQGTTVVLERRDKYVSDDQEGHGGGLTAPMPGKIIAIAVQAGDSVQKGQALLVMEAMKMEHTITAPAAG
VVSKIFYALGDQVTDGVALIALSETEQ
>AHV94640.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MRLDPTSLKLFISVVELGTIAAAAEQEHIAAAAVSKRISELEENLGIRLLTRTNKGIHPTPAGFALSTMARRALHELDEV
AVRMREYVSGLRGFVRVFANISAITQFLPRDIRDFLGEYPNVQVDLEEKITPAIIKAVAENAADVGIFSGTVPDHDVEIL
PYREDMLALVVPAMHPLQATAGFRFVDALEYDFIGLHRGSAINRILSHAASGAKRTVKLKVQVTGFDALCFMVDSGLGVG
VLPLDLAQRYAAIFNIRIIALTEPWARRKIQICVRAFDALPTAAKLFVDHLSRPQM
>AHV94641.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHHGIGRAVPISRLNLDEYNLLTVHS
>AHV94642.1 hypothetical protein D560_3049 [Bordetella holmesii ATCC 51541]
MNPALTLYLDSNFLSPYAMSAHVGLQEKGLPFEVRLVDLDAREQFMAPYTQRAPTCRVPALSHDGFHLTESSAILEYLEE
CFPAPEYVALYPADVRLRARARQLQAWLRSDLMALRQERSTIAVFHSEADASLSDAAMPAMAKLLRVAELLLKPGQTNLF
DTWSIADTELAVMLKRLRRAELPDWLAAYADLQWQRPAVQRWLRHNQEARS
>AHV94643.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94644.1 marR family protein [Bordetella holmesii ATCC 51541]
MTHDDVDHDDLPALDRFLTYRLHVINKISDRDSAQAYADHYQLPIGEGRCLAAIGRFAPLSVNDLARAANLNKGQASRCA
QALSDAGLVRKSVSSSDGRGVVLSPTAKGQRRYRQLIELIAARNEEIFGCLTAREQSEFSRMLDKIISHLRPEDA
>AHV94645.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGARLGLRLRGHR
>AHV94646.1 hypothetical protein D560_2661 [Bordetella holmesii ATCC 51541]
MLVGAAAGAYVGAMAGAMFLLRALRQTQRRLVQSEDEAASRGVVLAAQIHPDEEGAVLSLLNDAGGRHIQRQQHVGRAPA
SWAPRDRRLDRAGHTQWQS
>AHV94647.1 ABC transporter family protein [Bordetella holmesii ATCC 51541]
MSATLLKVSGLTMRFGGLLAVDSVAFDVKSDEVFAIIGPNGAGKTTVFNCVGGFYKPSAGEILMDGKPITGLPSHKVARH
GLVRTFQNVRLFKQLTVLENLLVAQHTQVESRLLPGLLKLKSYRQSEAEALDRAAQWLDFMGLRDLANREAGNLAYGHQR
RLEIARCMITKPRLLMLDEPAAGLNPQEKRDLQNLIDQLRREFGVAVLLIEHDMSLIMGISDRILVMEHGKPITTGTPDE
VRNDPRVIKAYLGEE
>AHV94648.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MFGRLGDLVGRKYTFLVTIVIMGLSTFLVGVLPSYSSIGIAAPAILIILRLLQGLALGGEYGGAATYVAEHAPHGRRGFY
TSWIQTTATLGLFLSLLVILGVRNYMGEDSFKEWGWRIPFLISVVLLGISVWIRMQLSESPTFQRMKEEGKGSKAPIAES
FGQWRNLKVVILALLGLTAGQAVVWYTGQFYSLFFLTQTLKVDPNTANIMIAIALLIATPFFVIFGSLSDKIGRKPIIMA
GCLIAALTYFPIFKAITAYANPALAAAQASAPVTVIADPATCSFQFNPVGTSSFTSSCDVVKSFMARNSVNYENQSAAAG
SVARVKIGNDEFQSFDGKGLPPAEFKAKVAELDKALTTSIRAHGYPAKADPAQTNNVMVVLLLTILVIYVTMVYGPIAAM
LVEMFPTRIRYTSMSLPYHIGNGWFGGFLPPVAFAVVAATGNIYDGLWYPIIIAAMTLVIGTLFVRETKDNDINT
>AHV94649.1 ribosomal protein S5 [Bordetella holmesii ATCC 51541]
MAKVQGKNAAEKENDDGLREKMIAVNRVSKVVKGGRTMSFAALTVVGDGDGRIGMGKGKAREVPVSVQKAMEQARRGLFK
VALKNGTLYHTVVGKHGASTVLISPAAEGTGVIAGGPMRAIFEVMGVRNVVAKSLGSSNPYNMVRATLNGLRNSLTPSEV
AAKRGKTVEEILG
>AHV94650.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MAVLSRRLMFVVNNPAFFLSHRATLAEAALAAGYEVHVATMDDPSVPRIQAMGITHHVIPMSRSGKNPVQELKTLWALYR
LFKAARPDLVHLVTIKPVLYGGIAARLARVPAMVAAISGLGYVFVAEGARARLVRSVVRGFYRLALGHPDSRVIFQNTND
RDVLRNLGVVRPAQMELIRGSGVDLAQYRFQPEPPEPPVVVLMVARLLRDKGVREFVEAAALLRQQGLNVRMRLAGDIDP
GNPASISAEEVQAWSRGGLVELLGERKDVAELYAAAHIAVLPSYREGLSKSLIEAAACGRAVVTTDVPGCRDAIDPDETG
LLVPARDATALAAALARLVMDAAQRQQLGRAGRALAEREFSIEDVCNRHLAIYASLLVAARR
>AHV94651.1 sporulation related domain protein [Bordetella holmesii ATCC 51541]
MGLFTRKDSASESSPSRPRPSVSSEAQAAELRGRARRRLAGAVALVLAAVIVLPMMLDSEPVPVSDDIPVRIPDRNSPYQ
PNVSEPVAVPQTPASPAPPADTAPAPAAAPDATVPPPEAVAQVPAVPPPVAATTPPPRPLDALKPVEKPALVKPADKPKN
ESGSRSDDGARALALLEGRTPAPAAAKPVAKPAAKGNFVLQVASYTTQTDARERRGKLHQAGVTNAFVEQATISGKQQYR
LRVGPFPSREAAQAAQARLRTLGYDNGFIAAQ
>AHV94652.1 hypothetical protein D560_3723 [Bordetella holmesii ATCC 51541]
MGLFLRFALHAGPARGLLPSMTSGARPSDGQQAADIVGRFGPVSA
>AHV94653.1 cyclic nucleotide-binding domain protein [Bordetella holmesii ATCC 51541]
MYADLMAQLKTRWEHIDHHPPLDIELSSAELIKRVPIFEGLSPDSLRAICKLLKPRLALPDQRILAHGHHGQEMCFVASG
AVVVQLPDHTTVELGSGEFFGELALLGDEHINADVRSLGYSKLLMLSARDLHAVLARDPDLRERIDKVVKQRLRAIEVWR
QFSETGQVYPPGVKPPVKEASADTAPDGPRAESD
>AHV94654.1 molybdenum-pterin binding domain protein [Bordetella holmesii ATCC 51541]
MRSGDQTWGGAQRIALLAQIGATGSIAAAARAVGMSYKGAWDAIDAMNNLAGVSLVERATGGKGGGSSRLTEPARTLIAR
FEQLQHEHQRFMQHLASQGLAGDLNLMRRFMLKTSARNRLLGNVADVRAGAVNDEIRVALPGGHILRATITRESTAELGL
QPGREVIALIKASAVLVGLPGTGMRLSADNQLPGKVAQLRKGAVNDEVVIDLDGGGTLVAIITDDSAQALALAEGNTVHA
IFSAASVILGVMD
>AHV94655.1 rieske domain protein [Bordetella holmesii ATCC 51541]
MTDIASLAQLQQALSPLHARAYFDEALFVREQEILFRQSALYVGHEKSVPEPGDWRRLPQDDGSRILVRNGNEVALLSNV
CRHRQAVMLGPIAGGEAMKGNLSVTGGNIVCPLHRWTYDGQGRILGAPTFPVRPA
>AHV94656.1 D-alanine--poly(phosphoribitol) ligase subunit 1 [Bordetella holmesii ATCC 51541]
MAMVGALMLGAPFVPVDTIYPAERLRRIVEIVGAGTVYDAAADRFEPGAAQPRALDEKSLAYVIFTSGSTGDPKGVQIGR
ESVALLGQWMSTFGLGDAPVFMNQAPFSFDLSMYEVFGTLALGGTCVLSAREQIAAPADWYTRLAAHGIRCWVSTPSFAH
QQLVNRDFSPATLPALDTFLFCGEPLTVALAKKLRQRFPLARIINTYGPTEATVATTAIVVDDAVIAAHDPLPIGYAKPD
SRVYVEEGELCIVGDHVMRGYLNRPDLNETKCFRAADGRRGFRTGDLGEQGEGGLLFCRGRMDDQIKLNGYRIELSEIDA
ALHGLTGVRGGACAVLRRPDGTAVRLIGFLDVDVSAPAYAGADVQADWKRLLAERLPPYMVPTEWVLCPSLPVSNNHKTD
RKKLLEIYASL
>AHV94657.1 enoyl-CoA hydratase EchA1 [Bordetella holmesii ATCC 51541]
MSELVKVDVADGIQVITVNRPDAKNAINLETAQAMAEALDQLDARDDIRIGILTGAGGTFSSGMDLKAFAQSGQRPLIPG
RGFAGLNERPPKKPLIAAVEGYALAGGCEMALACDLIVAASNSKFGLPEVKRGLVAGSGGMIRLPRRLPYHVAMEIVLTG
DMLGAERAHQLGLVNRLTEAGQALEGALALARVIVENGPLAVQTAKSIVQQSLDWEQEGMFDRQRPLIAHIFTSADAKEG
ATAFAEKRKPVWQGK
>AHV94658.1 peptidase M48 family protein [Bordetella holmesii ATCC 51541]
MTPTKRALLWTVATGTLTLAGCANLQNMDTNSLMGAGGNVARAVSLSDADIVQLSDAACKESDAQSKIAPAGSNYAKRLD
TIMAGFGGMDLNGQKINYKVYQTDEVNAWAMGNGCVRVYTGLMDKMNDDELRGVIGHEMGHVALGHTRKAMQTAYAVSAA
RTAAGAAGNSAISALSASQMGELTEKFINAQFSQAQESAADDYSFDLLTKKKMNRQGLVTAFEKLAELDGGQSGLLSSHP
SSPARAKHIQQRIDSGK
>AHV94659.1 ABC-2 type transporter family protein [Bordetella holmesii ATCC 51541]
MLKEFLQLRRDRITFGMIIVLPLVQLALFGYAINTDPKQLPTAVLAADQSEFTRSYLSAMSASDYFRIVDTLPDEASARQ
ALARGDVLFVVTIPPDFTRKLLRGERPALLIEADATDPLATGMAIGAAAQLADSVPRHDLTGPWAHLAGAPAAFDVRVHR
LYNEEQVSQYNTVPGLIGMVLTLTLVMITGLAMTRERERGTMENLLAMPVTPLEVMTGKIMPYIAIGLIQATITLAAARF
VFHVPFEGSLLAVYLTTLLFVAANLTVGITLSSVAQNQLQALQLAMFYFLPNLLLSGFMFPFLGMPAWAQAIGNVLPLTY
YNRLIRGILLKGNGWIDLWPSIWPLIVFTLVVMGLALRFYRRTLD
>AHV94660.1 PTS system fructose IIA component family protein [Bordetella holmesii ATCC 51541]
MTGIVIVVHAPLGSAMRESVRHVLGDTTDVLAVHDILPQDLPDDLVPQVLQDILRVNRGQGVLVLTDLIGATPANIAKRA
VADAQASGVQCCVLAGLNTPMLLRALTYRNLSLAETREKALAGGVQGCLRVD
>AHV94661.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MIEASCAGGQALKMRNTLTKPTPLTEPAMHFDLTDLHLFLNICEAGSITAGAKASHLALPSASARLRGMEASLGTALFER
QRRGVSATPAGQALAHHARVLLQQVAHLQEDLGEYALGFKGRVRLLCNTATLSEFLPDPLGKFLKAHPNVDVDVSEQASY
RIVPALLQGTADVGIVSDAVDLSGLDALAFRRDRLELITPADHPLASRRALRYADTLDYDFVALEAGSALSVHLDDQAAR
AGRQMRARVRMRSFSALARMVQRGVGVAIIPESASRRLRLGAGLRRLSLTDEWADRRLLVCVRALDSAPAYVQALVQALR
A
>AHV94662.1 bioY family protein [Bordetella holmesii ATCC 51541]
MTSKNLVLAALFAALIVVLSLMPPIPLPGIPVPVTLQTLGVMLAGVMLGPWRGAAACLLYLAQPGRLRNGLPAGGIVAVY
AVGVPWLAMVTQMGLPKAAMAVAVFLPGDLAKAAVASWVAWRVERVWPLLRR
>AHV94663.1 chorismate binding enzyme family protein [Bordetella holmesii ATCC 51541]
MTELEFKALAAQGYNRIPLVAETYADLDTPLAIYLKLAHAGPQNGRMSCLMESVVGGERFGRYSFIGLPAHTVIRASGRK
TEVLRDGVVVETHDGDPLAFIEQYQARFKVALRPGMPRFCGGLAGYFGYDTVRHIEPRLGPAVKPFPNGMEEGTPDIMLL
HVDELVIVDNLAGRTYLMVYADPAQPEAYNRAQERLLELRARLRKPVDIPYSHASMQTEERRDFAKQDYLAAVRRAKEYI
AAGDLMQVQVGQVIAKPFRDAPLSLYRALRSLNPSPYMYFWNFGDFQVVGSSPEILVRQEQIREDGQLKSQITIRPLAGT
RKRGGTPEEDMALAAELRADPKEIAEHVMLIDLARNDVGRVAEVGSVKVSDTMAIERYSHVMHLVSNVTGTLNPGMSSMD
VLRAAFPAGTLTGAPKVRAMEIIDELEPVRRGIYGGAAGYLSYGGEMDVAIAIRTGVIKNGTLFVQAAAGVVADSVPELE
WAETEAKARAVLRAAEQVQHGLDDPI
>AHV94664.1 RNase H family protein [Bordetella holmesii ATCC 51541]
MRSGGHEKTFFGGDANTTNNRMEILAVVEGLRALKRPCTVVVHTDSQYVMKGMTEWLPNWKRRGWLTADKKPVKNVELWQ
DLDAQVARHSVSWRWVRGHNGDPGNEMADMLANQGVASVGRR
>AHV94665.1 membrane protein insertase, YidC/Oxa1 [Bordetella holmesii ATCC 51541]
MIFSFSLLLLWNNWQIHNGKPSLFGPAPASAEQKAPANPATPVVNDASTPSVPSAPTAAAAPGSVPGSVAVVPAQAKEVV
VTTDVLRLTFSTTGAQLVRAELLKYPASADNDKPMVLLDRSADLTYTAQTGLIGSGQSFPTHLTPFAITTPDRELSGDKL
VIRFEAESGGLRVSKTYTLDRGSYDIHVRHDVTNVSDTPQSPSVYMQLERDGNDPAGTSSFYHTFTGVAVYSEQDKFQKI
TFGDIAKNKASYIKQADNGWIGIVQHYFATAWVPQQGKPRTNELLQVQPNLFAARSIEALGQVAPGASASSEAQLWVGPQ
DQKAMSAVAPGLELVVDYGWLTIIAKPLFTLMTWLHSLLGNWGWTIVALTVIIKAVFYPLASASYRSMARMKQVAPRLQA
LKEKFGDDRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILWIHDLSVRDPYFILPAVMM
GTMFLQIRLNPTPPDPVQAKVMMVMPLVFGGMMFFFPAGLVLYWCVNNTLSILQQWSITRSIARRATAPAKRS
>AHV94666.1 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MNGADSLCDTLLANDIDVCFANPGTSEMHFVAALDRKPRMRCVLGLFEGVVTGAADGYARMADKPAATLLHLGPGLGNGL
ANLHNARRARTPMVNVVGDHASYHVQCDAPLTSDGEAVARPMSHWVGRIDNAAAVAARTSEAIEVARQAPGNVATLFLPA
DAAWTDLPDGTPAPAPVDIQAPLRPDGDAVRAAAAAIRSGEKTMLMLGGAALRGRALAAAGRIAQATGVRLASETSNRRI
ERGLGRVPVARLPYPVDMALAFLKDVRNLVLVGARAGCFFCLSRQTQPFGALGVQCGGTGHPRAGSGAGAGMAGRRAGYQ
AGRPAPGRARMA
>AHV94667.1 thymidylate kinase [Bordetella holmesii ATCC 51541]
MTGRFITLEGVDGAGKSTHTGWLVDTLRARGLDVVATREPGGTPLGERLRELVLNEDMGLDTETLIMFAARSEHLRQVIA
PALARGAWVVCDRYTDATYAYQGGGRELGAARVAELEQWLRPPLRPDLTWLFDVPLSVARARMAGERQLDRFEQEAEAFF
ERTRQAYHARAAAEPQRIHIIDASQSLQDVRLTLQADLQQFVARHLT
>AHV94668.1 alpha/beta hydrolase fold family protein [Bordetella holmesii ATCC 51541]
MSAFLGVPYAEPPVGALRLRSPRPCQSWSGARDALRPGPASLQTPLGNQSWLNEPPAAQSEDCLFLNVWTPSTSGRQPVL
LWVHGGATRNGSGAAGAIDGAALAAHGVVVVTINYRLGALGGLAHPLLADPDTGLCANWGLQDKLAALRWVRDSIAAFGG
DPARVTLAGQSSGAANVALIAQHGLEAGLYRGIITQSPPLFRPPMFAEMEAASAYTEALSASLGVDVAGLRQIDGAVLQQ
QEQAFAVSAAFKRPATAPVRDGQLIRQWPYDAPAARVPLLAGWTATEADFWFDLTDGQGQRLSPMQAPATLAELQPRAAA
LVAAHYAFAQAPDVREVIDLYAQGHDTAPAIWRALYTDLVFRAPMLHMLARHARAGMPAWAYEFGFPVAGSADSSPHAAD
VPFVFGNTGQAHVSQKIGRPAEALAVSQAMMGRWRDFIVDQSPGWSGFDPARPAVMRFGLDGEHAAPVHAASAAGLWPGY
FSATQA
>AHV94669.1 secreted repeat of unknown function family protein [Bordetella holmesii ATCC 51541]
MKRHYAYLALVGLSLIAGGAQAQAPAKAEAGMLVDAKGMTLYTFDKDSAGSGKSVCNDACAKAWPPLVAPAGANAQGDWS
IVTRDDGSKQWAYKGKPLYLFAKDSKAGEKAGDNVKDVWHIVKP
>AHV94670.1 membrane protein, TerC family [Bordetella holmesii ATCC 51541]
MLFDWMSDPTAWVGLATLIVLEIVLGIDNLVFTAILADKLPAHQRNKARMLGLSLALIMRLALLASIAWVVTLTQPLFSI
LGAEISGRDLILILGGLFLLFKGTMELHERVEGRAHATSGRQQYAVFWQVIAQIVVLDAVFSLDSVITAVGMVQDLSIMM
TAVIFAMAVMMLASRPLMAFVGRHPTVVILCLGLLLMIGFSLVAEGLGFDIPKGYLYAAIGFAILIELFNQLAQRNRQRD
EHGLGRRERTARMVLKLLRAQGEDASGVPAEPQAAEHAAAFAPEESSLIEGVLSMGQRDLRSIMVPRGEMIWLDVRDDTA
TVLHKFASGHSRLPLCDGDPANVVGVLHFKDVLAPLRVPGALDLIELAQEPHYVPETVPVIKLLEVMRQSRDHLLIVVDE
HGVCEGLVTPMDLLTAVAGDLPDHAEDQVTGAARLADGSWLLDGRLATPEAARIIGAPLLGQNYAEDATLAGCVLRAADS
LPEVGVRVRWRDWEFEVRRLEGRRIAQVLARQAV
>AHV94671.1 cupin domain protein [Bordetella holmesii ATCC 51541]
MQAKPKWLMRESDAIAYHPANHTGTTNRRLISPRTVGSRQVEVLLGTIEQGSGALPHAHPGIEQVCYLLEGTARAQVGEE
SAEMQAGDCCYFPADIPHLFTVTSEQPARLLVIYTPPYEERPDRVIRG
>AHV94672.1 putative exported protein [Bordetella holmesii ATCC 51541]
MTLRIAFIVALAAPLAACVTAQNIRSLDPLFYGSTQRSAQQYTECVSAAWKGMGVNFTQQPLRDGLELVVDGSLGVEAVL
SASTYRGKTDVKLASRLPQRSQPLVESANLCL
>AHV94673.1 glycerophosphoryl diester phosphodiesterase family protein [Bordetella holmesii ATCC 51541]
MFEFDVKLSRDNVAILMHDDDVDRTTDGQGPAKDKSYTEISLLDAGSWHSPAFAGEPVASFVSVARYTRANGIACNVEIK
PCPGREAETGAEVARLCAEYWHDASVLPLLSSFEEPALAEAQRVAPQLPRALLVEKVPADWRERLARYGCIALNINQKDA
TPALIDAVHAAGYRIAAWTVNDPARARQLLSWGMDAIFTDKLSDIRPSA
>AHV94674.1 TPR repeat family protein [Bordetella holmesii ATCC 51541]
MLNLSRETSDPRLARRAFEFQLAGGNLPGALDASRVWARLSPGDIEASSTELALAAANGQTKGLAQALRQRIDATPDKVA
GITQAMGVLSRLNDRRLALRILDEALSDNVRKLPAAHLALADVAQAAGDFPRADSEARAALAADPRSEAAAQRVLEYGAR
VDPARAEEAARAFIARNPNARKLQLMLAGLMAERVDYDGAQAELSAMARRSPEDFDLLFMQAQLAYKANHLDQARALLNQ
YLDVQDQRKQATVPGASDAGAAAADAHVLLSRIAEDQGRYDDAIAELGRIDDPSMRYGAHMRQATLRACQGRIDEALALV
DTAGAQDDEERTLGALTKAQILRDADRVDQAIAVLSKADQALPDTVEIKYELAMLQERRGHIDQLEKLLRQVIALDPEHA
HAYNALGYTLADRKQRLPEALDLITQALELSPDDPFILDSMGWVKFRMGDLPAAAEYLKRSYAKRPEPDIAAHLAEVLLA
QGQRQEAENLLREAYRKDPKNGTVLDTMKRLGVQP
>AHV94675.1 hypothetical protein D560_2155 [Bordetella holmesii ATCC 51541]
MRGIFITEAVPLDLLSRPASEFAGAQRVSPSCGDFEEI
>AHV94676.1 hypothetical protein D560_0453 [Bordetella holmesii ATCC 51541]
MPLNLNANINAPDTFYQALIDAHQDLSDEQSREMNAALILVLANHIGETDVLNEALAVARQSVQPIN
>AHV94677.1 VRR-NUC domain protein [Bordetella holmesii ATCC 51541]
MLPAHRYYYLHNFQRELDWVAARYDDMLDAAERDFLCRFGALPQGSQALLVRLLTRKGDVFRSDKLVYDEIGDITAAASP
LLELGWLAANPDLSVEDLGRLYTKTELAPLADHKPGVRKDILLEALQPHAPRPHRDWWPHAQESVWQVRVGEVCERFRLL
FFGNLRQQWDELVLTDLGIYQYESVPFSLESRAFQHRIDLADYLRLERWREQLDQSGPDPDLRQAVCAATSANPWLMARR
AKLLMRFGQASERLRDWPQAGAAYAACHYRGARHRLMRVLEQQGQYAQAHALAMAAMAEPEDEGESQRVARMLPRLRRQL
GLAAPPKVAEPALLQESLCLAAPASGTSVEGAVRDHYASLGATVHHVESSLINGLFGLLCWEAIFAPLPGAFFHPYQRGP
ADLSAPDFVARRARLFQTCLGYLDDGSYVGRIRQRYADRQGVQSPFVQWGLLTPSLLDQALDGVPAADLRRLFERLLADP
GAYRSGLPDLICFWPGQGRYELVEVKGSDDRLQDNQTAWLHYCARHGIATRVCYVNWK
>AHV94678.1 TPR repeat family protein [Bordetella holmesii ATCC 51541]
MDFEPWWLIFVPVLFALGWLAARFDFRQMLRETRTLPDSYFRGLNFLLNEQPDRAIDAFVEVAKLDPETTELHFALGSLF
RRRGEMERAIRVHQSLLSRSDLPQAEREHAQHELAQDFLKAGMLDRAEAAFEQLKATDTRYALPALRSLIRIYESEHDWP
RAIEAVKTLHGLVDEPVPQLVHYYCEQAQGALSAKPADIEAALTALDAADHAVEVAGRGESLSHGSKVRTSLLRARLAGL
ENDSKRERLYLESILADAPEYAGLVAEQLLANYRQAGEAVQGLEHLRAQYERHASLDLFNVVFRELRAQQGSDMAWAFAR
AALRHHPSLLGLDRLLEAELSAQPAGEAQSSPVPGADLSLLRTLIHKHTQRLDRYACRNCGFQARRFYWQCPGCNAWETY
TPRRLEELE
>AHV94679.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MHQPIPPSDLAADNQTLSDQLFRKLQSAIIKGDIAPGSKMSEPELARVHGVSRGPLREALHRLEGQRLLVRVPHAGARVV
SLSPKELSELYEIRESLEGMACRLAADRMPAQEVQQLRDVLHAHEKDAAFQAGLGYYQQEGDYDFHYRIVKGSGNQMLFR
MLCDELYQLARMYRIQYSNTPNRPKQSYAEHHRILDAIADGDGELAEILMRRHIRASRLNIEQQITQGKQPKSQA
>AHV94680.1 phosphoglycerate kinase family protein [Bordetella holmesii ATCC 51541]
MSKVNTLSALAKEGKLAGKRVFIRADLNVPFDDSGRISEDTRIRASVPGIRLALDAGAAVMVTSHLGRPKEGVLTEADSL
ARVAQRLSEVLGMPVPLQQNWVDGVQVEPGRVVLLENCRVNVGEKKDDEDLSRKMSALCDVYVNDAFGTAHRAEATTHGI
ARFAPIACAGPLLEAELDALGRALHDPKRPLVAIVGGSKVSTKLSILQALAGKVDQLVVGGGIANTFMLAAGLPIGKSLA
EPDQIAQARAVIDIMAERGAAVPIHTDVVCAKSFGAEAQASTKAASDVADDDMILDIGPQTAQTLAEILEKAGTIVWNGP
VGVFEFDQFANGTKVVAQAIADSEGFSIAGGGDTLAAIAKYHIGDKVGYISTGGGAFLEFLEGKSLPAVAVLQERAV
>AHV94681.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MTLWFLRRLAQAVVVVLLMTLIVFVGLHAIGNPVDILIGQDVDQVDRARIIAELGLDQPLWRQYLAFLNGALHGNLGNSF
VYNIPAVQLILQRMPATLELAFAALFLAVLIGVPLGLYAGLYPEHPVSKAIMTGSIVGFSLPTFWVGLMLIMAFSVSLGW
LPASGRDQTVEVAGAQWSWLTADGLRHLLLPAINLSLFKMSLVIRLTRAGVREVLPQEFVKFARAKGLSPMRVVVMHILR
NTMIPLVTVLGLELGSTIAFAVVTESIFAWPGAGKLILDSINALDRPVIVSYLVVVVYLFVMLNLIVDILYKMLDPRVRL
EGAQ
>AHV94682.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MFERDKGKLTLTSEAQRLFQEIGPLFDEALRIDELARDLATRPEGTLNLCSSPSLALNFLPPVLARYLGEHPDVRVKFHT
TLLSDMAHELLGRKVELAISVLPIDHPNLVVEPFASGRMVCILPQHHALAARQAVSLEELARERLVLYNRNIPFGQLVSA
AFQRAGVAWRPAVDIERAELACALVGSGAGVAIVDEFSVSGKGWPEIAIRPLHQSIPLALSLVRSRFERQSRHVQRFVRM
LKAHAPGTSPASLAP
>AHV94683.1 corA-like Mg2+ transporter family protein [Bordetella holmesii ATCC 51541]
MAQESTAAEPPVNQVVASVAYINGRRSREVPIAEVGDYVGGDKGMLWIGLRNPTVECITQVVDALGASVKNREKMIETHR
RPKIIDYGNMVLIVAITVEIDAGRPVFGETQYLVGEGFLVTVRRSALSTHSTLRERLESAPDLLKRGSDYITSELLDLLV
DRYVAAAGQLESVVEHAEQKLLIRGAKDADIRKLYRQRRDLLRIHNAIAPMAEICRRLARVEMSAIDAQARPYFAEVADR
VVRVDELINALREALAFAFEASLMIGQGQQNDTTRKLTSWAAILAVPTAVAGIYGMNFEYMPELKAHWGYPITLSVIVTI
CAVLYWRFRKSGWL
>AHV94684.1 hypothetical protein D560_2080 [Bordetella holmesii ATCC 51541]
MICAAGMPLATVLHALTHLPAQVSDNGTRRQGDEGQGTEQHNCDVCSALDAFEEALLGALPPITGAPPQPPALAWAARSS
QLVAPRWFEPRAPPARPPILPA
>AHV94685.1 POTRA domain, ShlB-type family protein [Bordetella holmesii ATCC 51541]
MKHPVFGSLLIPVSLALFTSHAWADGPLRGNPVDALPTIERPPAAAPQTPVAPTPEQQAVAARLAQHIVPRHFDVSGVKT
LPFEEVSAFLTPLAGKDITVAQLVTEVDKITALYRERGYPLSFALVQNQDFADGLVVVTVVEGYIDTVRIDGDLGNAQAR
LQDLAQPLLQDRPLKQATLERVLNLMRTVPGVSFTPALELPKRANGATELSVNATRKKFTGNGGVADMGTGMQPMVNVGA
NSLTPLGEQVRLTASVPLNTDDVRYFSADVRVPVGNDGWAIKVDGYHYQAKPRDEAIQYLGFGRKVTTDRIGVGVSYPLL
LNNRRSLTGTLGVYATNAKDRYDQHNSDNWLREDSRVRAATAELRYLDVLPERSTDATVSVSKGVDSMGARAKITSNYGY
QATPATDLDFTLWNLSVRQAVTLPAQFGLVLSGAGQYSSDILLSSEQVSYGSWRFGMGYPQGEISGDKGLGLSAEVNRRF
NIGYKYLQALQPYALVDYARSWYNNPALKPVNPKHLSSVALGFRVTDDKYYLFDFNIAKPVGSVTANDRDRDIRFNANYS
LFYDAL
>AHV94686.1 PepT family domain protein [Bordetella holmesii ATCC 51541]
MSTPVLELRQLRTEFRIGGAWHAAVRDVSLTVAPNETLAVVGESGSGKSVTALSVLRLLPTSGARHAGGQILLEGQDIAS
LPEKQMMRLRGDAIAMIFQEPMTSLNPTMTVGGQIAEAIRQHRKLSWAEARKLALEALQEVKIPAAEKRFDAYPHQFSGG
CASVS
>AHV94687.1 tat (twin-arginine translocation) pathway signal sequence domain protein [Bordetella holmesii ATCC 51541]
MSVFSFTRRQALQAIAAITVAGALAACGEAPPPFKGSDITGTQLGKSIALTDMNGQPRTLKDFAGKVTVVFFGFTQCPDV
CPTSLAEMAQVMQLLGPDADRVQVLLVTVDPQRDTPEILREYVTSFDKRFLALTGSPDELRQAAAAFKAYYAKVPTKDGG
YTMDHTAAFYLIDGKGESRVLANNTLGAQALANDIKLLLDGR
>AHV94688.1 alanine racemase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MRDLAPFSALRVRGLMTLALLSTEAERVRQCFTGLRVLRDRLRQGMPYVEELSMGMSGDYEIAIEEGATVVRVGQAIFGA
RDTPDAFYWPER
>AHV94689.1 aminotransferase class-III family protein [Bordetella holmesii ATCC 51541]
MNAPAGLPDLSHLWMPFTANRQFKAEPRLLASAKGMYYTAVDGRQILDGTAGLWCVNAGHGREEIITAIARQAGELDYAP
GFQLGHPGAFEAANAVARFMPEGLDRIFFTNSGSESIDTALKIALAYHRARGEGQRTRLIGRERGYHGVGFGGISVGGIG
SNRKAFSGALLPAVDHLPHTHNLEKNAFTQGQPAWGAHLADDLERLIALHDASTIASVVVEPMAGSTGVLVPPKGYLQRL
REITARHGILLIFDEVITAYGRLGSATAAEFFGVTPDLITMAKGVSNAAVPAGAVAVRRQVHDAVIEGVQGGIEFFHGYT
YSAHPLATAAILATLDIYRREKLFERARELAPAFERAAHRLRDAHHVIDVRNIGLVAGIELAPRDGAAGARAAQAFQKCF
DRGLLVRYTGDILAISPPLIINEAQIEEIFDTIGQVLKEIA
>AHV94690.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWGPTKQA
>AHV94691.1 liporeleasing system, transmembrane, LolC/E family protein [Bordetella holmesii ATCC 51541]
MLKLPYELWIGARYAGLARLGRRGGRRDRFISFIAASSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPG
ALPDRVLAQWQEFADAARKNPEVKGGAPFVAAGGMLVRGQALRGVQVRGIDPSLEGEVSDLPKQMVSGKLSDLKPGSFGA
VLGSDLADSMGVKVGDTLLMLAPQGSISPAGFAPRMRQFTVAGIFTSGHYEYDSSLVFVDDDDAAKVFRDSGTAGVRLRV
ADMQRAPEVAAELTRVLPPYVMASDWSRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTL
GAGPREVARIFLVQGALIGVIGTLLGVLGGIVIAYNVHIIVPFIEGLFGVHFLPREIYFISALPSDPQAGDIITIGVTSL
VLSLLATLYPSWRASRLQPAQVLRHD
>AHV94692.1 hypothetical protein D560_1948 [Bordetella holmesii ATCC 51541]
MLVMAGDSYPENSFELFGPVIEWVENFLTGTSQPLRLELELLYLNTSSIKSVMDIFDILESFHQKGHSVAVTWYYDTRNE
RVGELAEEFKEDCTFPFSVVGRS
>AHV94693.1 ammonium transporter family protein [Bordetella holmesii ATCC 51541]
MDKADISWLMVSTLLVLMMAVPGLALFYGGLVRSKNVLSVLMQVLCAFVLAVVLWFIYGYSLAFTEGNAFFGGLSRAFFS
GMFTVTDGKYAMSATLTELLFASFQATFAGITCALIVGSFAERARFSAVLLFTVIWFTFAYIPIAHMVWFASETAPGLLN
AHGALDFAGGTVVHINAGVAGLVGAHVIGKRVGYGREAIQPHNLPMTYTGAMLLWVGWFGFNAGSALAANETATLAFFNT
MIATAAAVLAWVATEWSIKGKPSVLGAASGAVAGLVGITPAAGLVGPMGAFIIGVVAGVICVWGVNGLKRMLRADDALDV
FGVHGVGGIIGALLTGVFNAKALGGPGLDSTSLILGQVWVQLESILLTIVWSGVVAFVAYKIANAVFGLRVPEDQEREGL
DVTSHGESAYHS
>AHV94694.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MDSSIALILLQDGIVNGSIYALLGMALVLVFAVTRVIFIPQGEFVAFGALTLAMLVDGRVPGTVYLLVLLGCLAFVLELL
RAVRTRVWSSLPKSLAGFVVLPLVLLWIATSYAAAGNSLWLNMLLTLVLVISMGPMVYRIVYQPLAEASVLVLLITSVAV
HFALMGLALVFFGAEGWRTPAFVNGQVDLGFTTWSAQSLFVVATCAILIVALWLFFGKTLYGRALRATAVNRRGARLMGI
STTMSGSLTFTLAVAIGAMSGMLIAPITTVYYDTGFLIGLKGFVGAIIGGLASYPVAAAGSLLVGVLESFSSFWASSYKE
VIVFTLIIPVLVWRSFSSRHVDEEE
>AHV94695.1 carbon monoxide dehydrogenase subunit G family protein [Bordetella holmesii ATCC 51541]
MRITDAQWVPSTPHQTWAALFDPGVLQRCLPGCIHVRRVTDTEYAITVRAKVGGLDAEYAGEVLVSDAEAAQCCSLAFDG
KGAAAGLAIGTADVRLSPKDNGTRISYVVTATAGGKLAALGEPAILKAAGKIIDRFFTAFGDHLASVPRQAPPPPPPAAE
PRGLSSSRWSWVMALAVVVMLVGYHTLFK
>AHV94696.1 doxX-like family protein [Bordetella holmesii ATCC 51541]
MIDPRSAPYAAFLLRLMLGVMYLAHGLTKLLVFTLPGTAQFFAKIGFAGWLAYPVTFFEIVGGLFLILGIVPRWVAAVAT
VQLLVAASVHVNNGWGFGNPGGGWEYPVFLALSAAVLALLGDGKFVLVSSGRRV
>AHV94697.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MRLRHIEVFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREADILTPEIARLNKDLNSVRR
LAASLRESPYGHLRLGCAPALGLGLLPAVVRACRDDHPGLTFDIHTHHSAELVQGLLARELDLAVTFDTNAHPGLTRSEL
GYTSLVHLSRQAGQGPARLADLAEDTLIVLDARDASGSLLQAALDTLGLAPTVAIQVQTHYVACALAEAGCGHAIVDAIT
ARAMLRPGMTVRPLEPALRVPIGILTRSRDPLPTLYQDFVDRLRAHCRALERAGLPRTD
>AHV94698.1 ribosomal protein S10 [Bordetella holmesii ATCC 51541]
MKNQKIRIRLKAFDYKLIDQSAAEIVDTAKRTGAVVRGPVPLPTRIRRYDVLRSPHVNKTSRDQFEIRTHQRLMDIVDPT
DKTVDALMRLDLPAGVDVEIALQ
>AHV94699.1 hypothetical protein D560_2424 [Bordetella holmesii ATCC 51541]
MVYACAVIWVFATYSAWRAWGGVLIPALVLAGLYWVGAR
>AHV94700.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSLQRQFRVDAPNQVWVTDITYIRTHEGWLYL
AAVLDLFSRQIVGWSMSDRMTRELAINALLAAVWRRKPEAEVLVHSDQGSQFSSHDWQDFLKAHRLRPSMSRRGNCYDNA
VAESFFQLLKRERIRRKIYSTRDQARADVFDYIELFYNPRRRHSYIGQVSPVEFERRYFLMNGTV
>AHV94701.1 ferric reductase like transmembrane component family protein [Bordetella holmesii ATCC 51541]
MVTLAITPVRRLVHLPALVRLRRMCGLFAFFYAALHFTAWVWWDRGLELASMLHDLAERPFILVGFMAFVLMTALALTST
QAAMRRLGRHWQQLHRAVYLIGLLAVLHYWWHKAGKNDFREPLIYGAVLFVLLGWRVAAWVTRRREIRAGPS
>AHV94702.1 yihY family inner membrane domain protein [Bordetella holmesii ATCC 51541]
MRFPTLLRICHPRELAGLLMDSARQWSRHRAASKGAALALYMVFSLAPMLILVIAVAGAFFGEEAVRSELFDQVRDLTGE
RGAEVIQTVLASAHQSGKGWVAALLSVGVLIFSATTAFSELKASLDELWEVEPDTSGGIQGLVRSRVLSFGLVLVLACFL
LFSLMVNAAMGVARGYYGEIWSNSLVAMVGDWLANLFSFAVVTALFAVIFKLLPSVSVLWRHVIPGAVVTAALFLLGKWG
IGLYLGRGGVASAYGAAGSLIALLIWIYYSAQIFFFGAVVTRQYAVRAQRLEAGEPLTPSAQPGH
>AHV94703.1 pseudouridine synthase family protein [Bordetella holmesii ATCC 51541]
MEKVRISKLMSERGLCSRREADGYIERGWVRVDGVVVSELGAKAYPDQTITLERAARAAQTSLVTILINKPIGYVSGQAE
DGYTPAAALVDARSQFEGDRSRRRFDRTHLRGLAVAGRLDIDSQGLLILTQDGRIAKQLIGEDSAVDKEYLVRVDGKLSE
RGLAVLNHGLTLDGKPLKPADVRWQNDDQLRFVLREGKKRQIRRMCELVGLKVVGLKRVRIGRIRLGDLPLGQWRYLRED
EGF
>AHV94704.1 ATP synthase F0, B subunit [Bordetella holmesii ATCC 51541]
MNLNATIFFQMLVFFVLGWFTMKFVWPPLTKAIDERRQKIADGLAAAEKGKADLAQAQARVSLIEASAKSETHARIVDAE
KQAAGLIDQACREAEAERARIVAQAAQDAAQEVQRARDALRDEVAALAVKGAEQILKREVDARAHAELLTQLKAQL
>AHV94705.1 acetoacetyl-CoA reductase [Bordetella holmesii ATCC 51541]
MNAKLTALVTGGMGALGQAIAHALDDAGHRVIVTCHRRGPATQARLREHKAAGREFLAYAVDVADHASCRQLAEQLAADG
LAVDILVNNAGLTRDASLRKMLPQDWTDVLRTNLDSMFNMTQPFVEGMTARGWGRIVNISSSVNGFKGAFGQTNYAAAKA
GIHGFTKSLALEVARKGVTVNTVSPGYLDSPMVSAVPPDVLRDNVLPQIPVGRLGKPQEIAALVAFICGDLAGFMTGSNV
AMNGGQY
>AHV94706.1 glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein [Bordetella holmesii ATCC 51541]
MTWEEGPALAFSHMGFYVIDLAAMTRFYQQALGFTVTDKGTMGQAQLVFLSRDPAEHHQIVLVSGRPDAVPFNVINQVSF
RVPDLPGLRHFHARLLAAGVADMQAVTHGNSVSFYCRDPEGNRLEVFMDTPWYCEQPLRQPVDLTLDDASIMTLAERIAR
DRPGFQPRTEWQQAMHLRMLADRRQP
>AHV94707.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94708.1 hypothetical protein D560_2205 [Bordetella holmesii ATCC 51541]
MALIDIRKRTLIVETTYHENGPAPANPLKLAASCAVIRNPYAGRYEPDLMPFMAELRSLGTLLATELVDTLGKDNIEVYS
KAAIVGINGEMEHGAVWHEAGGWAMRTVLGEPKAMVPAVKAVASAGYRLMVPVHYIHASYVRSHFNSIEIGIQDAPRPDE
ILFALVMGTGGRVHARLGGLTKEAVTVHDGQR
>AHV94709.1 carboxymuconolactone decarboxylase family protein [Bordetella holmesii ATCC 51541]
MKPSDVDTIKANFIAARGYWRPWNEALLRGNPAFIERYAAYAGHPARTGPLSARMVELIYIALDASATHLYEPGLTTHLR
LARQAGASEADLFDVLHRVTLQGLSAVFHAADLLHEALPLPPLAPGHALRARIDAAWPEHADSLVRLAAADPDYVTVLLD
FLELGRPQDGLDAGECLLVDLALRACFTHADTDATRKLIQRGVTTGVGRAAMLQTMQLGAHLAVHGAALGATVHARESTE
T
>AHV94710.1 hypothetical protein D560_3716 [Bordetella holmesii ATCC 51541]
MAVLVVRWFGGIKLGAGGLVRAYGGCAANCLRAGHYLEIIPAVQVSCRCSFAEQPVLRMRLAAAGAHILAEDYDATGVAL
VVEMPAAVQSELARVAANITRGQSHWHVLQPPQTVPEG
>AHV94711.1 peptidase M48 family protein [Bordetella holmesii ATCC 51541]
MKTALYRVSALAGLMALGACSSMSTTQSGAIGVNRTQYMSSLVPAAQLEQEAVKQYGDTLAKAKAQGQLDKDAAQLTRIK
SISQRLIAQTGVFRPDAAQWPWEVHVIASDEINAWCMPGGKIAVYTGLLNRIKPSDAELAAVLGHEIAHALREHARERVS
QQMATNIGLSVLSIATGSQQAADLGTRLSEVMFTLPNSRTHESEADLMGMELAARAGYDPRAAVTLWQKMAAAQTGQASP
EFLSTHPSASTRIADLKQASERVLPLYEQARR
>AHV94712.1 putative permease YjgP/YjgQ family protein [Bordetella holmesii ATCC 51541]
MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGDKFSMLALLYMQALALPTRLYDLLPIGLLIGAILALAGLA
QRNELVILRVSGVSGMRLMRMLWTITIPLMIGATLLSEYVTPIAEIKSGEADLTFRGKAGGGRLNSGYWFKEPTRDGGTR
IINIKTLLADGQVRDVTLYELKPNLELESLSTAATGKFTGGDLVLTDVVQTRIDEKAAEALANAKPPATPPAQVNKQASL
RLDTTLSPERLLARVLTPERMSAVTLLDYIDYLHHNQLQADRQIVALWRKFVYPFTLLVMITIAAPIAFMQTRRGGVGVK
VFIGILMGVAFFMINQLSLNVGMLSRWPPWLTALGPNAAAMLLALGALVMMEYRHAFTRYRQQRKVA
>AHV94713.1 neutral zinc metallopeptidase family protein [Bordetella holmesii ATCC 51541]
MRMDDSRESDNIEDRRSQGPRLGKGSIGLGTIVLALVAMYFGVDPSVVLQMAQGPDSGQQQAPAPRSDDPASRFIARVLG
ETEDTWSTIFQRDLNRQYVAPKLVLFRGATQTACGTGQAAMGPFYCPADRKVYLDLSFFDEMQRKLNAPGDFAQAYVIAH
EVGHHVQNLLGIADQVDQARRLNPAQANALSVRTELQADCFAGLWARRANQARHILENGDIEEGLNAASAIGDDTLQRKS
QGYVVPDAFTHGSSAQRVRWFKRGLESGDLRHCDTFGAGQL
>AHV94714.1 orn/Lys/Arg decarboxylase, major domain protein [Bordetella holmesii ATCC 51541]
MSKYLTEHGVVVEKTGLYSFFILFTIGITKGRWNTLLTALQQFKDDYDRNQPLWRILPDFCREHRQYERLGLRDLCQVIH
EAYRARDVARLTTEMYLSDMVPALKPSDAFARMAHRQVERVEIDQLEGRVTGVLLTPYPPGIPLLIPGERFNRTIVQYLQ
FAREFNERFPGFETYIHGLAQDVGPDGAKRYYVDCLKESDAA
>AHV94715.1 L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Bordetella holmesii ATCC 51541]
MHLHILGICGTFMGGLALIAREAGHKVTGCDAGVYPPMSTQLTEQGISLIEGFGADQLSLKPDLFVIGNVVSRGTPLMEA
ILNSGARYVSGPQWLGDTILPHAHVLAVAGTHGKTTTSSMLAWILEDVGLTPNFLIGGVAPGLQVSARYRAGVRPFVIEA
DEYDTAFFDKRSKFVHYRPRTAILNNLEYDHADIFPDLAAIETQFHHLVRTIPSEGQIVLPTRCEALERVLARGNWSRTV
RFGAGGAWQAGPPDDDGAFTVLRDGHGVGTVHWTLGGEHNRMNALAALAAAEDIGVRAADGVAALSRFAGVKRRMELRGT
VNGVAVYDDFAHHPTAIATTVEGLRRQVGSGRILAVLEPRSNTMKLGTMAARLPQALAGADLVFCFGAHEGKYALGWNPA
DVLAPLGTRASSYDDLNTLVRAVSQAARPGDHVLVMSNGGFGGVHDKLLAALAHPQ
>AHV94716.1 lysR substrate binding domain protein [Bordetella holmesii ATCC 51541]
MLRSTSVVAQYHAALQGQSLAILPCFIAAQDPRLTPVLSAEVAITRSFWMYCHEDLYRLKRVSLLWDFMREAAERNQALF
AGRAGELITDGV
>AHV94717.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MRGYGLRQEFITPHCPPQNGMVERVIRTLKEQRAHRHRFETIQHASRVIGGGIRFYHHRRRPHQALGMKPPVNACA
>AHV94718.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKHRIIVAACAALAAVATPAAQAQWPERPVTIIVPFPAGGGTDTFARPLAQQLGMQMGQSVVIDNKGGAGGTVGAGVAAK
ARPDGYTFFMGGAHHALAPSLYKSLSYNIQKDFVPVALLAQPPQVVVVNKEKLPVKTLGELIAYAKQHPGEINFGTAGKG
STHHLAGELFALQNGLKLVDVPYQGAGPMLSALIGGQVDMAFDGLGSSANHIRAGSIVPLAVASTERSPAFPGVPTANQA
GVPDYEVSTWYALWAPAGTPPEAIEKMTAEVTKALNQPKIKEIWLANGSATPTLTGAQFGAYVDSEIGRWAKVVKDSGVT
LD
>AHV94719.1 hypothetical protein D560_0823 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSPTQKDATGSAGRAATASACSVRDDM
>AHV94720.1 DNA-directed RNA polymerase, omega subunit [Bordetella holmesii ATCC 51541]
MARITVEDCLNQIPNRFKLTLAATYRARELAQGHAPRLDSKDKPTVTALREIASGLTGLEMLRKVPT
>AHV94721.1 putative indolepyruvate ferredoxin oxidoreductase [Bordetella holmesii ATCC 51541]
MDGTPAVDPHIDLDYQLADNLSRRQGRIFLTGTQALVRLMLAQRQADRERGLNTAGFVSGYRGSPLGGVDMAMWKAPKAL
DANQITFMPGINEDLAATAVMGTQQVGTRDDRKVDGVYAMWPCGMARDRAWIVPATPCIMATRPAPRATAAC
>AHV94722.1 ankyrin repeat family protein [Bordetella holmesii ATCC 51541]
MRRLIEAGADVNLPDGQGVTPLAHARQRGQKETERLLLAAGAR
>AHV94723.1 aminotransferase class-V family protein [Bordetella holmesii ATCC 51541]
MFDRKLTLDKVDPDLWAAIQKEDVRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYPGKRYYGGCEYVDIVEQLAID
RLKQVFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMSLAEGGHLTHGASVNASGKLYNFLPYGLDENEVLDYAQVEA
LAKEHKPKLIVAGASAYALHIDFERMARIAHDNGALFMVDIAHYAGLVAGGQYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAEFEKAVNSAIFPGIQGGPLEHVIAAKAVAFKEALSPDFKEYAAQVVKNAKILAETLVKRGLRIVSGRTESHVMLVDL
RAKGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIRLGTPAMTTRGFKEAEAELTANLIADVLENPRDEANITAVR
AKVNELTSRLPVYGTK
>AHV94724.1 apolipoprotein N-acyltransferase [Bordetella holmesii ATCC 51541]
MKRGFGGAGLLAAAGAAHALSFAPGPLPAWSLVWVQILMLAVLAHAVLQAPTRRRAWLRGWGFASVSFTVGLYWLYVSMH
DYGAMAAPLAAAGVVALSVFLAIFPATAGWLARSICPPHVPASPWRACWVALVWAASWTLFEWLRATVMTGFPWLNIGYG
VVDSPIAGWGPVLGVHGMAFVTAFAAAAVASLKATGNARQALAAAVAVVLVLAGWVLSLLPWSRPHGEPLAMRLVQGNVE
QSQKFDLALMEQGLRRHLELAAMPPAAGSPSPELIILPETVLPVFQDQLAPQVWEAWKAVAARQSATIAMGVPLRLPDPD
GRTRYTNSVLGLDATTPLADLTAGRTSMRYDKQHLVPWGEFVPPGFRWFVDMLEIPLGDFDRGAAYQRPFVVGDQRVAFN
ICYEDLFGPELLPALYPDASGLGGATIMANVSNLGWFGNTWALRQHMQIGRLRSIETARPMVTATNTGITAAIDARGRVV
AELATHKTGILPVTVQGMTGLTPYARFGDKLVLLIVGVVLVAAAARVRRRR
>AHV94725.1 5'/3'-nucleotidase SurE [Bordetella holmesii ATCC 51541]
MRILVSNDDGYNAPGLEALVDSLSGLGELTVVAPETNHSGASNSLTLNRPLTVRTASNGFIYVNGTPSDCVHVALTGLMD
ARPDLVVSGINNGANMGDDTLYSGTVAAASEGYLFGIPAIAFSLVEKGWEHIESAARAARRIVERQIAEPLAAPVLLNVN
IPNRPYEDMRGLRVTRLGKRHPSEPVVRTTTPYGDTVYWIGPVGLASDAAPGTDFHAIAEGAVSLTPLRLDLTQHAQLDL
VGQWANPLCANL
>AHV94726.1 acyl-CoA dehydrogenase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MLLALVMLVTLVLALAPLRRALLTRPIFDLYRKVLPRMSQTERDALEAGTVWWEGELFRGRPDWQRLLALPTPALTADEQ
AFLDGPTARVCAMVDDWRITEQDRDLPAQVWAALKQEGFFGMIIPKEYGGLGFSAFAHSEIVTRLSTRCSALAVSVMVPN
SLGPAELLLHYGTDAQKNHYLPRLARGEEIPAFALTSPWAGSDAAAIPDHGVVCRGQWQGQDVLGMRVTWDKRYITLAPV
CTLLSLAFRLYDPDGLLGQTRDIGITCALVPHDHPGVHTGRRHFPLNAMFMNGPTRGQDVFMPLEFIIGGAEMAGQGWRM
LMECLAAGRSISLPSSNTGMSQLTTRTVGAYARVRSQFQLAVGKFEGVQEALARIGGHTYAMDAARVMTAGAIDLGERPS
VVSAIVKYHVTERARQVVNDGMDIIGGKGICLGPSNFLGRAYQQLPIGITVEGANILTRSLIIFGQGAIRCHPYVLDEMR
AAQHPKAKEGLLAFDKAFWAHVRFVSANTVRALSSALTAGRFNRAPGQADAAMHPYYRALGRLSAGFALTCDACMLALGG
SLKRRESLSARLGDVLAQMYLASAVLKRFEDQGRQAEDLPLAQWALQDALWRAQEALLGLLENLPQRAVAAGLRVVIFPW
GRPRKPPADRLGQQVAQLLTAPGGARDRLTANCFIPADVREPVAAIEAALSATLQAEAIEARLRALQKSGTLGDNPKVNV
RDLATAAFESGALGQEDYAIMQKRNALRDQVVSVDDFPADLSRRPTA
>AHV94727.1 hypothetical protein D560_2379 [Bordetella holmesii ATCC 51541]
MSQDENDRPRKTLTIKAKPAAPESESSEPNRRKRSGARARQAAQIERASHVQSRGNEQPVQRPDADAGYAERPLQRRRSQ
GYASAERGTHSRGDDTAGENRRRSGMGVVRDETPRQGAPAPDWDDVFAGQQDEPEHDGQDGHAIDTPQAYRQRRHQGRQA
ETFRCYAPCPQGLEDALTAEMQALGFDDAHAGRAGCAFTSDWSGVQRANLYSRLATRILVQVGQGDLNHEDELLDLAYSV
PWERWFGPEDTLRVDTSAIKSPVHSLQYCNLRVKDGICDRLRDREGARPSIDTVRPDARVQLFMEGTHATLYLDTSGESL
FKRGWRLDKGEAPLRENLAAGMLALAGWDPAAALVDPFCGSGTILIEAAWIALGVPPGISRPFGFERMRQHDARRWRDLK
DDARSRIRTQLETPIIGYDIDERAIEFARANAERAWLTDETIRFEVADARHVQAPVEQGWIVTNPPYGERMEIADEFWRE
WSACLKHQFAGWQAHVISSDMKLPQRMRLKPVRRIPLHNGSLDCRLFAFELVHASYRDGANPPL
>AHV94728.1 replicative DNA helicase [Bordetella holmesii ATCC 51541]
MLGGLLLDNGAWDRIADVLAEDDFYRHDHRLIWQHIARLIALARPADVITVNESLVSAGKSEDVGGLAYLNALAHNTPSA
ANIRRYAEIVAERATLRKLVSIADEISAAAMSPQGKEARQLLDEAESKVFKIAQEGARGSGGFQEIQPLLTQVVERIDEL
YHRDSESDVTGVPTGFTDLDKMTSGLQPGDLVIVAGRPSMGKTSFSMNIGEHVAIEQGLPVAVFSMEMGAVQLAMRMLGS
VGMLDQHRMRTGKLVAEDWPRVTHAVQLMQEAQVYIDETPALSAMEVRARARRLARQCGQLGLIIIDYIQLMSASSAGEN
RATEVSEISRSLKGLAKELNCPLIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEI
IIGKQRNGPIGTVRLTFQGMSTRFLNFTSAPQY
>AHV94729.1 gntP permease family protein [Bordetella holmesii ATCC 51541]
MHADLGMTMALGLLTAIPAVILAGPIYARWLAPRMPVAEPEELGQLFTNSRDANRLPSFGVSLFIILLPVALMLGRTVAR
ISLTKDSLPYDVLDFLGEPIVALSVAVLAAIVLLGWAQGTSRDAVGKTLRRALPPIAGLLLTIGAGGGLKQVLLSAGMSD
TISKIATQSQMPLLLLAWIVAVALRQATGSATVATTTTAGIIAPLAVGLSTTHGALLALSIGAGSVFFCHVNDAGFWMVK
EYFGLTLKQTFAVWSALQTIVSVVGLAVTFGLWQLL
>AHV94730.1 hypothetical protein D560_1608 [Bordetella holmesii ATCC 51541]
MACTGRDVIDYDAAHGGLLPADPPIPVQGDRRYICIDGNSFLKQRGGRA
>AHV94731.1 preprotein translocase, SecE subunit [Bordetella holmesii ATCC 51541]
MVARIGVFVGGLVISAVIVWFSEPGRRTISFAQESYNEVKRVSWPTRKETIQMTGIVFAFVAVMGIFMWVLDKGIEWILY
GLLLGWK
>AHV94732.1 recombination protein RecR [Bordetella holmesii ATCC 51541]
MDNSLPEAEPLRALIEALRRLPGVGARSARRMAYHLLQHDLQGADLLGRALAGAVQNLRHCSRCNSFTEDEICLICANPK
RDATQLCIVETPADQNVIESSHGYRGLYYVLMGRLAPLEGVGPRALDFQRVLDRASDGTVQEVILATNFTAEGETTAHFL
GEALADRG
>AHV94733.1 bacterial extracellular solute-binding s, 3 family protein [Bordetella holmesii ATCC 51541]
MNILSRTLLSVFAAALLPLAAAQANDLAQIKSNGVIKIGTEGTYAPFSFHDAKNQLTGFDVEIGRAIAGKLGVKAEFVEG
KWDGLIAGLDVKRYDAVINQVGITDARKQKFDFSDPYISSEAVLIVRNDEKDIKDFADLKGKRSANTITSNFGKLAQSYG
AEVVPVQGFNEAIELLLSGRVAATVNDKLSFLDFKKQKPNAPVRIAAYDKSKEFSESGVLLRKGNPQLQAAINQALADLK
ADGTYRRLSEKYFGADLSSAR
>AHV94734.1 hypothetical protein D560_3200 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSR
>AHV94735.1 peptide-methionine (S)-S-oxide reductase [Bordetella holmesii ATCC 51541]
MRGVVSVRPGYAGGHVDNPSYQQVCNKNTGHIEVAEVQFDPAELSYADLLRVFFATHDPTTPGRQGNDVGPQYESAIFWQ
TEAQREQAQAVIAEVDAAHIYDAPVVTRLLAPTRFWPAEDYHRDYFELHPEQGYCQFVIAPKVAKFRKQFHDRLKR
>AHV94736.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMK
SWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV94737.1 alpha/beta hydrolase family protein [Bordetella holmesii ATCC 51541]
MPGSLFAVAGKTEHHLYAGPAGDIDILIDAPVQTPRGIALITHPQPLLGGSPRHKIPHRLAHALRDDGWLAVRPAFRGVG
RSAGQYDHGDGESEDMLALVHALRDASPTLPLALVGFSFGAFVQARVARALIDAGSPAQRVALAGLPVGEVPAERFYDTP
ALPEDVALIHGERDEQAPLALLMEWARPTGHPVTVVPGADHFFSGSLPLLLHLVRAHLAA
>AHV94738.1 flavinator of succinate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSKLTELQRARLRWRARRGLLENDLIITRYLDAYELQLTDEDVSALTQLFELGDNDLLDLLLARKELEGELNTPRLRAII
AQMQEL
>AHV94739.1 aminotransferase class-III family protein [Bordetella holmesii ATCC 51541]
MSNLSQAQQQDVQYQLHSYTNAIKHAQVGPRIITRGEGIYVYDDKGNRYLEGMAGLWSVAVGFGEPRLVDAATRQLQELP
YYHTFTHKSHPSVIELSERLIGYTEGRMAQAFFTNSGSEANDTVVKLVWYYNNALGRTDKKKIIARQRGYHGVTVASASM
TGLPGNHKGFDLPLPQILHTACPHYYRQALPGESEEDFATRMADELEALILREGPDTVAAFIGEPVMGAGGVIVPPQTYW
QKIQAVCRKYDILVIADEVITGFGRLGKRFGSEIFDIEPDLMVLSKQITSSYQPLGAVLLNAKVSDAIRNYSGRLGTFGH
GYTASGHPVATAVALENLRIIDERGLIAHAAEMGDILRQELNALADHPLVGEIRSAGLIAGVELVADKAARTPFDPLGSA
GGYAYERAHDHGLIVRGIQDTVAFCPPLIITAAQVRDMVARFARVLDDTAAHLGHQR
>AHV94740.1 his Kinase A domain protein [Bordetella holmesii ATCC 51541]
MLGIRALLISLLLPGVILLLVIDSLNDYRTLSAITNEAYDSALLEPARVLESSLEFHPDGSLQVATPLYAQVMLESRVGL
RKYFRIEEIDPPWPEGAKEQPKDGRSLAGMPEMPRPPVWPQGNGQPIFYDAVYRNDPVRAVAVLRDLYYHGQHRQVLVIV
AESMGKRLAAETAAQRQEVLRDARMLALVALLVWWGVTWALRPLVRLRNDIRSRRQDDLTALDASRVPSEVAPLVEAVNY
HIARHRHVIDGQAQFLADASHQLRTPLAIMLTQAQYALRERDPARAQEGLRAIVDQLGRTRRLTEQLLSLAHANQAEVTP
RQVLDLNDLARGVVLQYLPLAHEKRQDLGWVDARGEDTAREDFGQVVVPVMGSEAELHELLSNLVHNAINYAPPGARITV
SVVKKADRAEVIVADNGPGIDPVLRARAFARFDRIGGERSAASSGTGLGLAIARGFARRNDGDIDLCDGEPNEQGGHGLA
AVFWMPIIDVAISPTGPDSRP
>AHV94741.1 glycosyl transferases group 1 family protein [Bordetella holmesii ATCC 51541]
MRILLINHYAGSPRYGMEFRPYYFGREWLAQGHEVKVAAANVSHVRAHAPQTRGRLTREWIEGIEYLWYATLPYQGNGVR
RLLNMLQFSARLYRLPSDLHGWRPDVVVASSTHPYDILPAARLARLTAARLIFEVHDLWPLTPKLLGGFGAWHPMIASMQ
FAEDYAYRHADLTVSMLPCALPHMHSRGLDPARYAHVPNGVPVAEYSAPDFSNADYLRVRAQIMQLREQCDFIVLYAGTH
GHANALDMLLLAMAQLRQTPVGLVLLGSGPDKARLQAQARELGLQHIAFADPVPRPAVQAVMTHVDAAYIGLRRSPLFQF
GVSPNKLFDYMLAGSPVIQAIASGNDIVGDAACGVSVPAEDPQALAQAILRLRDTPLAERRQMGERGRQYVLDHHDYPVL
AQQFLDAALARPAPTKQ
>AHV94742.1 ribose-phosphate pyrophosphokinase [Bordetella holmesii ATCC 51541]
MIFTGTANTRLAVDVVNHLDMSLGKMTVGRFSDGEVMVEINENVRGKDVFVLQPTCAPTNDNLMEIMVMVDALRRASAGR
ITAAIPYFGYARQDRRPRSARVAISAKVVANMLQVAGVDRVLTMDLHADQIQGFFDIPVDNIYAGPILLGDLWRRNLSNL
VVVSPDIGGVVRARALAKQLEADLAIIDKRRPRANVSEVMNIIGEVDGRTCIIMDDMVDTAGTLCKAAQALKDRGAGAVY
AYCTHPVLSGGAVERIAASSLDELVVTDTIPLSEEAQGCGKIRQLSCAALLGETILRISNAESVSSLFAD
>AHV94743.1 hypothetical protein D560_1202 [Bordetella holmesii ATCC 51541]
MTNFHGVLYSAISNRTRGQERSNDATWPGSARQRKPPQ
>AHV94744.1 hypothetical protein D560_3790 [Bordetella holmesii ATCC 51541]
MTEYVDGYVLAIPSDKLETYRTMAAHAAKVWLAHGALAYRECVGDALDPQHGMRDFRDVAEAGESDIVIFAWIVFSSKSE
RDRINAIVMNDPRLMEVCVEGVFDPRRMAYGGFQTLVQA
>AHV94745.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MDTPAEPRLDLNLVRLMTAVFETRSVSLAAERLGLTQPTVSYGLAKLRQAYGDALFVRDGRGMAPTPRAEQIYLAFQEAL
ACIDSTYELASPFDPGSTTRRFRVAMSDIGGLCFLPPLVAHMRKVAPLADLEVVQMPVDTLIEHLAGSKVDAAIGNLPML
HEKLHSRLLFREHYVCLMAQSHPASHRALTLTSFLAARHVLVTSPFLRTRMWKTHCAPSAYTEKSPCVSRISPSCPG
>AHV94746.1 putative transcriptional regulator [Bordetella holmesii ATCC 51541]
MLGTPRGIRISLTALERVCFQAIAESPGRELSRVVLSKILPGSNLRTLNVAISRLRKKVSEAGAELPLHTVHGMGYVFLG
QLQVQPC
>AHV94747.1 EAL domain protein [Bordetella holmesii ATCC 51541]
MPATKHRHRWSLFVALLAMALPPLLMAPLIWWMAEDRASGESAVTAATIQRQMDTTLDIVFEHVHQALGLLAQPCPDAAP
ELARQANTTVYYRSLTLMQRGKMYCSSLIGEINFTPRDIFDGLQALPAGHAITPIMGTLLVPDRMAIVVSESTAPGTGAL
AIIEGQYLVAIQKAASNRGAFRVEIALSDTGQPLSPSVPEHDVTAFSDRARAQAQSSRYPVLVTVAPALEIIAEHRAYLW
HHHAPFVVIVSLLVGLLAYHYNRRLSLISEIVRGMRRGEFSMVYQPVMHLPSGKMSGVEALIRWHRPDLDLVRPDLFIPL
AEQHGLMPALTCHIFELLAADLPFLHLGPQDHLAINISGSHLATPGFAQDVGRLMAALGPGRPRVVLELTEREAVLRDQQ
TLSNIQQARNLGVLWALDDFGTGQSALAYLREFDADFIKIDRSFVMGIGTDSVNAVVLEAIISLGRRLELELTAEGIKTR
EQADHLTGQGVQWGQGYLYSKPLPAEILAQWRRDREAGA
>AHV94748.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MLDWDSLRYFLEVARSQRVSAAARTLGVEHTTVARRIRALEAELGSLLFEKSRSAGFVLTDDGHRLFVHAEQLESTMHSA
RESLSGIGQALSGHIRIGATEGFGSYVVTPLAADFQRRYPHITLDILPVPRFVSLSKREADLAITIERPQRGPYICSRLC
DYTLMLYGTPQYLARHPHIGSRTDLAGHSFIGYVDELLFSERL
>AHV94749.1 bacterial extracellular solute-binding, 7 family protein [Bordetella holmesii ATCC 51541]
MLARLGAQPQQIDGAQLRAALATGRIDAAKWIGPCEDEALGLHTSAPNYYFPGWWEGTLQTSLYVNLDAYEALPLNYQAV
IAQASALAGQEMIARYDAANPAALRRLVGAGATLKAFLASVLQVCQAESAKLCNTLAAQDAAFSQLYDSMVAFRELTIPW
LRLAEGSFDGAMSSRSSR
>AHV94750.1 preprotein translocase, SecA subunit [Bordetella holmesii ATCC 51541]
MVSLLKKLIGSRNDRLLKQYRKLVVQINNLEPQISALSDEALQAKTQEFRDRHAKGSSLDDLLPEAFAVVREAGKRVFGM
RHFDVQLLGGIALHSGKIAEMRTGEGKTLMATLPVYLNAIAGKGVHVVTVNDYLARRDADWMGRLYRFLGMSTGVVVPQQ
PNDEKIAAYRADITYGTNNEFGFDYLRDNMEYRVEDRRQRALNYAIVDEVDSILIDEARTPLIISGQAEDHTELYVRMNA
VPPLLKRMAGEPKPQEPEPEGDYWVDEKSQQVYLSEAGHESAEKILSRVGLLPDGESLYDPRHIALMHHLMVALRAHTLF
FRDQLYVIQDGEVVIVDEFTGRLMVGRRWSDGLHQAVEAKEGVKIQHENQTLASITFQNYFRMYEKLSGMTGTADTEAYE
FQEIYSLETVIIPTNKPMKRKDQNDQVFKTHEEKYNAILNDIRDCHERGQPVLVGTTSIENSELLSGLLKQAKLPHEVLN
AKQHAREAEIVAEAGKPGHITIATNMAGRGTDIVLGGSVDKQIDLIRADEALSEADKAARVDAVRQGWKPLNEQVKAAGG
LRIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDSLMRIFAGDRVRAIMERLKLPEGEPIEAGMVTRSIETAQRK
VEGRNFDIRKQLLEYDDVANDQRKVIYAQRNDVLEAGSISDSIESLRDAAVTEVFRSFVPAESVEEQWDIPGLQTTLAGD
WQLQLPLTDMVEAEPNLTDEELLERVLQAAREVYRGKADLVGAESWGQFERSIMLQSIDTHWREHLSALDYLRQGIHLRG
YAQKNPKQEYKREAFELFSGMLDRIRDDVVRVLMTVRVQSTEQVEQAEAEAAQSHVQNVQYHHSDYDEALASDAQPQGQE
PARNVLPKVGRNDPCPCGSGKKYKQCHGKLT
>AHV94751.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MASNNFPWLTLAIFVPIVFGLLVLAVGRDDRPCLTRGCR
>AHV94752.1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein [Bordetella holmesii ATCC 51541]
MQQYFPVLLFIAVATLIGFALITAGSLLGPRRPYAEKLSPYECGFEAFEDARMKFDVRYYLVAILFILFDLEIAFLFPWA
IAQGTVGLVGFWTVMVFLAVLTVGFIYEWKKGALDWE
>AHV94753.1 hypothetical protein D560_3977 [Bordetella holmesii ATCC 51541]
MKTLTSAVLVSLAVLSTGAFASQNIEPNDVPFQGVYSQSTSSVSRADVSADLQQAKAKGLYTFGELDYPAVQMSRQSLSR
DQVKAELAQAKASGQYSFGELDY
>AHV94754.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MLIGVVLAVLPFVLGMAGQSWVRILNFALLYVMLALGLNIVVGFAGLLDLGYIAFYAVGAYTWALLASPHFGLHLPFWAI
LPIALLLACLFGVMLGAPTLKLRGDYLAIVTLGFGEIIRIFLNNLNAPINITNGPQGINRIDPFKIGDFNFGRTETLFGL
RLTGPEKYYYLLVLLTLIIVLVCARLQNSRIGRAWEAIREDEIAAKAMGINTRNIKLLAFAMGASFGGVAGALFASMQGF
VSPESFSLTESISVLCMVVLGGMGNIAGVILGAIILAALPEFLRAVVEPAQNFLFGSVVLDPEGIRMLLFGLAMVCVMLF
RPAGLWPSAVRKRELASTGRGGAA
>AHV94755.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MDIRALRYFVETVGCASFTQAARKLFVTQSTVSKMIRQLEDEVSTPLLIRDGHTARPTDTGRIVYERGLHILGAMRQLNA
EVRQAVELERGELEVGIPPMINLLFIPVVQCFRQRYPQIRLSLREGTG
>AHV94756.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MGRLLATRMSEVLGQTVIVENKPGGGGSIGAGFVAKSPADGYTLLLATMGQQSIQPLLARELHYDAQNDFSPIALFATVP
NVLAVSADTPAKSVAELLQYARANPGKLNMASAGIGSVNHMTGELFMARTGTQFAHVPYRGAGPATADLLSGQVQILFAN
LPNVLAYIKPGKIRVLAVASAQRSSTIPDVPTLTESGVADAVVESWYGVMAPAGTSAPIIQKLQETILAIAREPATVSLL
ADQGALPYPGTADDLAKLSAGETRRWTQIIDSAHIQTN
>AHV94757.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSQQKVAILTAAGSGMGAAAARKLAADGFQVAILSSSGKGEALAKELGGLGMTGSNLSPDDIARLVEATMQRWGRIDAVV
NSAGHGPKGKLLEISDADWTRGMEFYLLNVVRITRLVTPIMQAQRSGSIVNISTYATFEPEAAFPTSGYSVPAWPPSPSY
LPMSTRRPTCV
>AHV94758.1 hypothetical protein D560_2078 [Bordetella holmesii ATCC 51541]
MFKERDLSARQLLDQLLRSGQNLAQQAAGSSFPAKAGNEGGSLLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMA
ALGALAYRAYGQWRTTQSPAQDAPPQTPLRPSPDYPLRLPRFKAVPYWWR
>AHV94759.1 rieske domain protein [Bordetella holmesii ATCC 51541]
MKEAVFEPQWYCDPRYAEMERKNLFEKLWLTAGFVSTLKHDGDYFTFSVYGREIVVHRLRNDIVAYLNICPHRGGVMVTS
GHGNTRPVCKYHGWAFRSGGALTGIPMARDFDADENLRGKSCGRSLQRVAVQIVGPVIFVNLSENPLPIDAQFSEEILGW
VRRMGSTSSAIQAEFPGGFNWKLNAENIRDALHVLFVHPSSFSEVMPDALSLIHDDRVQRVQETPSCLYESFVPDVPSLH
RLSLTTNSHIDEGSYWYDDLVERSMPKESFLQIVLFPNTNLYSVAGRYYGMQQYLPKSASDFHYRLSLAMPRMLRPFDAS
SLLLSIARSERYVIEEDSLILRRVQKNLTAMAQHRFRFTQGDYETPIMQFMRYMGGAVYQENQTCQA
>AHV94760.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHHGIGRAVPISRLNLDEYNLLTVHI
>AHV94761.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MLARWSRIDVLVNNAAVVTPGDKVGDLSASHWHQALSINLIGAWLMSKWALAPMRRAGRGVVINVASQLGSVAAVGRGAY
GTSKAGLIALARAIAVDHADEGIRAMSLSPGAVLTGRVLRRYGDAEAARQALAPRYPSGRLGEVEEIARTALFLMSKDAA
FITGTDVRVDGGYTAV
>AHV94762.1 cytochrome c family protein [Bordetella holmesii ATCC 51541]
MKKKFSFRIQPYKSHYEVANFDDAHGFRAGSIGVLCDRRSGGRAADAAPVGNAQNARDKVSMCIGCHGIPGYKASFPELY
HVPMIAGQNAKYIEAALNEYRKGARSHPTMDAVAGSLSDQDIADLAAYYSSLK
>AHV94763.1 hypothetical protein D560_3400 [Bordetella holmesii ATCC 51541]
MVAAFIENIDQGPGTLNIFGVFHTYSVIADTTVRLQKR
>AHV94764.1 amidase family protein [Bordetella holmesii ATCC 51541]
MARTVGDVALYLAAMAGPDARDPWSLDQDPLRFARSLDSDVRGTRVAYAPNWGGLPVEPRVRDVLQASLPVFESLGCEVR
EACPDFSGADAAFHALRALAFAVTQGPTLARERARMKDTVVWNTELGLNQAGAVLAQAERDRASLFTRMHAFMQQHDFLV
GPVSQVVPFPVEEPYVREIDGTPMENYIDWMRSGYYLSLTGHPAISLPCGFTVEGLPVGIQIVGRYRDELGLLRLAHAYE
QATGLWRRAPAY
>AHV94765.1 aldehyde dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MGAEYFDFTVREPMGVTAQIVPWNYPLQIASRGLAPALATGNTVVMKPAELACLSVLELTRICHEAGLPAGVLNVVTGLG
HESGAALAAHPGVGLVVFTGSVATGKGVMKAAAENIVPVLLELGGKSPNIVLDDADLDMAAPLLLKAAFPHAGQTCSAGT
RILVQRGAHAALRERLTALVGQLRVGPGLSDPDIGALVSRDQQRKVQGYIEIGRREGVDVIAGGQPVAGADLDAGNFVMP
TLLDGAHAQMRVHQEEIFGPVLTLLPFDDIDEAVDIANGTEYGLVAGIWGRDVSRTHRLAQRVQAGQVFVNCYGAGGGVE
LPFGGYRKSGFGREKGLDALLSYTQVKNICIRI
>AHV94766.1 hypothetical protein D560_3834 [Bordetella holmesii ATCC 51541]
MRFSRLLSLLTTVLPGAVLAGQQAAAADAGWTFSFSPYAWASGISGTSGQAPLPAADIKSSFGDIWDNLDIAIMGAFDAR
KGRYSIVGDLLYAKTSVTDHNGNGILRKNIDVTSETFSTMVGGGYSLLQGANGNLDVIAGARLWSVSTRLSIEGGYLDGR
RKSGSATWVDAVGGVKGSYHLTDRTYLTGWALVGGGAAKLDWDLMGAVGYQASKHISVALGYRALGVDYRHDGFVYDVVQ
RGPMLGMTYQF
>AHV94767.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MWKSALTLAAAQGLPRLALAAYPERPLRLIVPFAAGGNIDAVGRIIGAAIGPKLDVPAVVENKPGAGGSIGADMVARAPA
DGYTLLVGSNGPLTVNPFIQAQLPYEPLKDFTPVGMVGYVPHVLVVNPNVPAKNLAELVALSSKQGINTGTSGVGSATHL
TLLRINAATGAKLVNVPYRGGALIPDLLGGNIEATVTEFSTALPLHRSGKARIIAITSDHRLALAPELPTLADQGYDNLV
AASYIGLLAPAATPPDVMARLQKALADGVHDSSIAAKLKDFGVEPATAQQETSAGFSAFLRDEYARSKAAAEQAGIKPE
>AHV94768.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MSFVAMAATTFGAAVVVFEVTMSLSLPATCHDVHPLLPDVRLPTDWAGMSRIDGLDDELTITAWHGMPVQALDVQAEGPP
MLCIAVFLDGEADMSIDGGPPLHATPGMAVIQTGEQCVRGRFRMPGGQRVRLIDIRYTPTGLLRAGGRPLVALQGDFLQD
CSAAGSLMAGFRAPSSLLHLAADVVDCPYAEPHTRRLYLRAKGLEALAVVLDMVNRSGSLPADPRERQLLARARRLIEER
YDEDWSVRRLAQTVGLSEKRLKAGFRSVAGRSVHAYLLQVRLDAAAALLAGGHSVTETALAIGFSRLSHFSKMFRQAKGV
APSSWAQTS
>AHV94769.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDHKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV94770.1 pfkB carbohydrate kinase family protein [Bordetella holmesii ATCC 51541]
MMSFPAQALARARVLVVGDVMLDRYWFGEVERISPEAPVPVVRVARREDRLGGAANVARNIAALGAHATLIGVVGADEAG
GRIAALASEAGVRTDLIADPQGHTTLKMRVLGRQQQLLRVDFEESPVGATLDG
>AHV94771.1 uvrD/REP helicase N-terminal domain protein [Bordetella holmesii ATCC 51541]
MSDRQPQDHAARLRALDPQTSFIVQAPAGSGKTELLTDRILALLSTVRKPEEIVAITFTRKAASEMHARVLEKLARGKGP
EPQAEHERRSWQLARAALERDAEMDWQVLRHPARLAIRTIDSFCAGLVRGMPWLSGLGGMPEIADDARALYEAAARATLA
LAGEHESIVNLLAHLDVDVAAAEQAIADMLGQRDQWLPLLAHGLDRERLQSHLAQTLSSELATVCSLMPRGFDADLCSLA
RQAAAELAASQDRRLDPLLDWQGPLPADADALPRWRALCHLLLTGAGSLRSPKGVNKTLGFPAKCAHKDAFVQWLSGFSG
DEPWIARLASVVDMPEAHFSDGQWEVLSSQLVTLALAVGQLQKVFADAGEVDFIEIAQRAQRALGDADDPGELLLKLDAS
ISHLLVDEFQDTSQTQIDLLTTLTSGWQPGDGHTLFLVGDPMQSIYRFRKAEVGLFLGATEHGVGELPLEFLRLTDNFRS
QGGVVDWVNRAFGDLLPRDNDAVAGAIRYSPSAAFHPPLDGAAVSFHPAWGTADRASGEAAAEDIAVALARAALLEHAGS
AHPVAILVRARSHLGSLSRRLAQEDIPSRAVELVPLRLRPVVADLVQLLRALTHPADRMAWLSVLRAPWCGLTLESLQRL
FGQDHRAPVPDVLRQALAEPVAASPQAGLFDAPSESGSAVARRCLAPEEYARLSRVAAILLDRGNDSGTWPLAAWLQSTW
QALGGAGLYTGVGAAADAESLFQLVERLAPHGGLDTAAFDTAVARLFAAPDVQGEQGAVEIMTMHKSKGLQFDSVILYGL
HRVPRGDQAPLVRFEHHNGRVLMGPIKARADIEADPISRYLGAREARRAAYETDRLLYVAATRARKRLHLIGSVAIDEEK
GLRVPAASSLLARLWPYVDAGQAPSPQADPQPDAGGIPAWQGGALMRLDDASVAELAATPRRNAQVAGLAADAEHPAWQL
EAGYEAAVGTLAHAWLARMGEEGGEFWDARRLREHLPAMRRQLTRAGIPDSQADSAAEAVLQTLQATLTHEKGLWLLRQS
RARREWPLIDAAGRVSVIDLALSIEDGWLIVDYKTGQALAGETAAHFSQRMRLRHAEQLKRYCAQVTALDGRPARAALYF
PRAQAWIEL
>AHV94772.1 hflC protein [Bordetella holmesii ATCC 51541]
MQRFMPYLVGLLIILAVLSSCVFVVRERDYALQFTLGEVRKVISEPGLYFKAPPPFQNIVTLDKRILTIESSDAERIQTS
EKKNLLIDSYVKWRIADPRLFYVTFGGNERAAQERLQAQIRDALNASVNVRTVKDVVSTERDKIMSEILANVAKRAEPLG
VHIVDVRLRRIEFAPEISESVYRRMEAERTRVANELRSIGAAESERIRAEADRQREVIVAEAYAKAQGVMGQGDAQASAI
YSDAYSKNPDFYQYYKSLEGYRAAFSKPSDVLLVDPSSDFFRFLKGPQGQPATAK
>AHV94773.1 nucleotide sugar dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSIRSIFSDFQLAIVGLGYVGLPLAVEFGKKRSVVGFDINARRIDELRRGHDHTLEVDDKELAEAKHLSYTTDHAELGQA
NVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGATEEDCVPVLERVSGLKFNEDFFAGYSPERIN
PGDKAHRVSTIKKVTSGSTHEVAELVDQLYKEIIVAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTE
AVLQAAGTKWNFLPFRPGLVGGIALAWIPTT
>AHV94774.1 hypothetical protein D560_0257 [Bordetella holmesii ATCC 51541]
MQAQNSLIIGSTQWHQRVSVQVDQGHPRAGSEALAGNTPTEVSGRTGNDDDLFCKIRAHNAMPPKEAPPQT
>AHV94775.1 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MERSFAREVGSLSLGAGEVFHGEGILAVTKALLQSGVSYIGGYQGAPVSHLIDVLGDARDLLDELGIYFENSASEAGAAA
MLGASIHYPVRGAVTWKSTVGTNVASDALSNLASAGVTGGALIILGEDYGDGSSIIQERTHAFTMKSQIWLMDPRPNLTS
IVDAVEQDFQLSEASQTPVMMQLRIRACHVHGSFVCKDNVAPAISTRQALREGKFDYSRINLPPSIYEHERQKVQVRWPA
ALEHIRRAGLNETFPGTREKLGLIVPGGLYNGLIRALQQLGLADVFGASEVPIHVLNVVYPLVPDALQAFCAGKDAVLIV
EEGQPNYLEEALTAMLRRAGLPTRVHGKDVFPLAGEYNGEVMLRGVAAYLDRAQPDASRAAAAGGLPGHKQAAVQALGEP
VPNRPPGFCVGCPERPVFSAIKMVQQKLGPLHVSADIGCHTFGTLAPFNIGSTVLGYGLGLASSSGIAPLMGRRVVSVMG
DGGFWHNGFTSGVVNAMYNNQDSVLVILKNGYTSATGTQAIPSSPSQPAAKPLTLDIETALRRVGVKWLRKVPSYQVADM
KRTLDEAMTTEEGGLKVIIADGECQLERQRRIKPQNAQRLKQGLRVVRTRFGIDEDVCTGDHSCIRLSGCPSLSVKPNPS
PLRSDPVATVNQGCVGCGLCGEVAHAAQLCPSFFKAEIVQNPGRWERRLARWRERLIHAMAGRARLPREVTA
>AHV94776.1 hlyD secretion family protein [Bordetella holmesii ATCC 51541]
MKKSLVWGSVAVLLVLAAAGAVWVNQYRGQDMPDTIGSANGRLEVGRIDIATKYAGRLRELSVSEGDEVAVDQILARLDT
TEMRTQLAGAQAAQGRAQQAVARARAETGARQVREKLARIELQQTQGLRSDDLVSKIELQRRQLSLQGESAGLAAADAAV
GEAMAAGLEAQAQIARIQSVIDDMDLRAPVAGRIEYRVVEVGAVLPAGGRVLTLLNTADIYMTVFWPARVAGHLRIGQDA
RLVLDGVPAAVIPAKVGFVASEAQFTPKYVETVSERDKLMYRVKLQVPPDVARRYASLLKAGMTGNAYVNLQADAAWPAE
LDVALPGD
>AHV94777.1 short chain dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MTFRTALITGSSRGIGEAIASRLAQDNYAVAINYASRGDDAEALAGRLHANGARVLALQGDVADAASAAALFDRVQAEWG
GLDVLVNNAGVLQTVPLAETSDAAFDHMMNINVRGVFNMLRLAAQRVRAGGAIVNVSSTLVATNLPGYGVYVASKAAVEG
FTRVLAKELRGRDITVNAVAPGPVATELFLSGKSAEQIAGFAKTAPLERLGEPADIANVVAFLAGPDGRWVHGQVLRANG
GLA
>AHV94778.1 fecCD transport family protein [Bordetella holmesii ATCC 51541]
MVVVALLATASGAVSIPLSALPRLLTGRGGADDALWQNIIWDIRLPRVAFALVAGAALAICGATMQALFRNPLAEPGLVG
ISLGGALGAVAAIVLGAGGFFLTASAAFAGSLAATACAYVLGQRVQGVSGLLLAGIAINAICGAVLGLLTFIASDAQLRD
LTFWNMGSLAGARWSILAFLAPWTLFWCVWLMRQWRALNALLLGEREAQHLGFALSRLRRKLILVTALVVGPLVAATGGI
GFVGLVVPHLVRMGLGANHRLLLPACILAGAVALALADWLARIVVVPAELPIGLVTALVGGPFFLWLLARGRRF
>AHV94779.1 universal stress family protein [Bordetella holmesii ATCC 51541]
MYKHILIPTDGSDLAERAVKQGLALARKLDARVTLIQVIQPVRASAGESVQLRGTLEEYEREERVQAEQWLAKAAVRAAD
AGVPCEAVTAINVQPYEAIVATARDKGCDLIAIASHGRSGLSAMLLGSVTQKVLAHSDLPVLVYR
>AHV94780.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MLDLIIRNAMLPDGRGPLDIGVQDGRIAVIATQLAAEAGQTLQADGQLVTTPFIDAHFHMDSTLSYGLPRVNQSGTLLEG
IALWGELKPLLTQQALVDRALAYCDWAVARGLLAIRSHVDICDPRLLAVEALLHVREQVKPYLDLQLVAFPQDGLLRSPN
ALQNLQRALDMGVDVVGGIPHFERTMADGAESVRILCEIAAERGLLVDMHCDESDDPLSRHIESLAYHSQRLGLQGRVTG
SHLSSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRHDSYPKRRGMTRVPELLAAGIPVAFGHDCVMDPWYSLGS
GDMLEVAHMGLHVAQMTGREAMRACFEAVTTTPAAIMGLKDIGLEVGKRADLVLLQARDPVEALHLRATRLAVLRAGRII
ATTPPARASLDLPGRPASVDFQLQR
>AHV94781.1 lysM domain protein [Bordetella holmesii ATCC 51541]
MLNGQLSLTGTFSMNTNIMRRPVRWAGVLGLVALAGCAGKATRAPVVDLTNQPASSATATAGGYVVKPGDTLFKIARANN
VDIETIKRLNSLSDPNQIHVGQVLKLSSATSSNAQPQPITGGQIQAKPLDAPDSHAAGTDTSTPATPVTPPPTPAETKPV
ARAADAGVINWGWPSSGQIQQNFNANSKGIDIAGNPGDPVMAAADGKVMYSGNGVRGLGNLIIINHQNGFITAYAHNRAL
LVKTGQDVKRGAKIAELGQSDTNAPKLHFEIRRQGTPVDPMQYLPAR
>AHV94782.1 ornithine carbamoyltransferase [Bordetella holmesii ATCC 51541]
MTPSTTQNGPLRHFLQFKDLTAAEIGYVLDRARIIKDKFKRYEPHMPLHDRTLAMVFEKASTRTRVSFEAGMYQMGGSVI
NLTSNDSQLGRSEPIEDTARVISRMVDIVMIRTFEQTRIERFASHSRVPVINGLTNEYHPCQILADLFTFIEHRGPVAGK
IVAWVGDANNMSYTWLQAAEMLGFTLHVSTPAGYELEASRVGNPPPAVLKQFKDPMQACQGAHLVTTDVWTSMGYEAENE
ERRAAFADWCVDAEMMAAADPKALFMHCLPAHRGEEVTGDVIDGPQSVVWDEAENRMHVQKALMEFLLLGEIR
>AHV94783.1 hypothetical protein D560_2341 [Bordetella holmesii ATCC 51541]
MHRHSFLALPDSSFRLIRRGLRLFAPAICVAVMAGCATKGTQTSAYDSEIDPYETEWVATSDDPIGLLVTHKIKRERQRQ
AQAPFASDSALVAEALNQLGVRYRFGGSSPATGFDCSGLVAYSVERSLGLKVPRNAADIARQATVIDRKELRPGDLVFFN
TLGRRYSHVGIYMGENRFVHSPSAGGVVRVENMTLAYWSKRFNGARRLDGSLLASARASND
>AHV94784.1 signal recognition particle-docking protein FtsY [Bordetella holmesii ATCC 51541]
MHPAAPPVQPEPAASPVPAVPEPVAAPVVPPAPSPSAIAPAAAAEPAAAPKKASWLNRLKQGLARTGQSIGGIFVGVKVD
ENLFEELESALIMADAGIEATEKLLTELRARVKKDRIEDAAQVKTALRQLLTQHLKPLERSFDLTRTQPLVVMIAGVNGA
GKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGTRNNVTVIAQEGGDPAAVAFDAVNAGRARGVGVVMIDTAG
RLPTQLHLMEELKKIRRVISKADAAAPHEVLLVVDGNTGQNALAQIRAFDAAIQLTGLVVTKLDGTAKGGTLAAVAAGSQ
GVRPVPVYWIGVGEGLEDLQPFVAEEFASALLAD
>AHV94785.1 hypothetical protein D560_3279 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSP
>AHV94786.1 di-trans,poly-cis-decaprenylcistransferase [Bordetella holmesii ATCC 51541]
MATSSTQAIPETGAIPQHVAIIMDGNGRWATSRHLPRTAGHAKGVQAVRRVVEACGRRGVRYLTLFAFSSENWRRPADEV
SLLMRLFVQALEREVDKLQEQGVRLHVVGDLSAFEPRLQELIQAAQDRTRDNDRLHLCVAANYGGRWDILQATRAMLQAE
PDLALRPADVDEGRLSQYLSMAWAPEPDLFIRTGGEQRISNFLIWQLAYTELFFSDAYWPDFGAEHLDAAFAWYGSRERR
FGRTSAQLAPVR
>AHV94787.1 universal stress family protein [Bordetella holmesii ATCC 51541]
MKPVVVPVDGSDHALRALAAALDSRLYPHLGEVHLVTVQPPLLRQGLHLGLRQEDIDAYQAEESATALKAARDMLDKAGM
PYSVHNEIGAVAECIVNVAQGCQASEIVMGTRGLGSIASVLLGSVATKVVRLADRPVTLVQ
>AHV94788.1 META domain protein [Bordetella holmesii ATCC 51541]
MPVSLRPLGPLMLALSLAACASRPVAPPIVGQQPGQQSDVLAQTTWELARWTLPGGALRPVPHAHSNERPITLTFTRQAD
RGQATGFCGCNNYSAQYVVANGSLLLQDTPVSTRMACPAANMELEQEYLAGLTRVTKTQFDNVGNPARMSLTLSTGDVLD
FARR
>AHV94789.1 binding--dependent transport system inner membrane component family protein [Bordetella holmesii ATCC 51541]
MALFILRRLIQSLFVLLAVSLVVFLAVYAVGDPIELLVSPEASMEARQAMITRLGLDLPVWQQYLNFLWRALHGDLGTSF
VHGIPAIELIVQRMPATFELVLVAITLTCIVGIPMGLVAGLYRDEPLGRGIMATSVLGFSLPNFWQGMMLILLFSVWLGW
LPASGRGTTVTILGIPFSLLTANGWAHVIMPAINLGLANIALVLRMTASGVAEAQSQEYVKFARAKGIKPGRIVRRHILR
NILIPVVTVIGMEFGQLIAYSTITETVFA
>AHV94790.1 iclR helix-turn-helix domain protein [Bordetella holmesii ATCC 51541]
MQEQVAGGADRVLYVLATLARHESPLTIAALAEQTGLAQSTLYRQIALLKRWGSCWSRPAPTARVRPAYNWRVALINRRF
>AHV94791.1 hypothetical protein D560_3971 [Bordetella holmesii ATCC 51541]
MPSSSSCQSSDVLDFWRHAGPQRWFARDVAFDREFRERFLEAHFAAARGELFDWEGSADGVLALLVLLDQFPRNAFRGTG
HMFATDGLALAVARRAVAHGLDREVDTELRAFIYLPYEHAENIDAQQEGVELMTHLGGETLRFAIIHRDLPPDLVRHRHR
AQG
>AHV94792.1 cell division protein FtsZ [Bordetella holmesii ATCC 51541]
MINFEMLENNTKGTVIKVVGVGGAGGNAVAHMIRSGVSGVDFICANTDAQALAATNAPVQIRLGRTGLGAGAKPEQGRAA
AETAREEIRSALNGAHMVFITAGMGGGTGTGAGPVVAEVAKELGILTVGVVTKPFTFEGNKRLKMAEEGISELGKHVHSL
IVVLNENLYELMDEEATQEDCFKSADDILHNACAGIAEIINVEGNVNVDFEDVKTIMGEQGQAMMGTATASGADRARVAA
EKAIACPLLEGVDLNGARGVLVNITSSRSLKMRETREIMETIRSYASDDATVIFGTAYDETMGENLRVTVVATGLGRAAA
RPQLVQTVTEELRTGTDNMPAGGMLAGQSGDYRGLDMPSVMRNPRTQASAQVRALESSGMDHFDIPAFLRKQAD
>AHV94793.1 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein [Bordetella holmesii ATCC 51541]
MLPLYDALHAEPRLRHVLVRHEQAAVHAAEGYARSTGRTGVVFVTSGPGMANTTSGLLDAMCDSIPVLCVSGQVATGAIG
TDAFQECDAIGISRSVTKWNTQIRRCEDVADVVGRAFTLTRQGRPGPVLVDFPKDVQLARPCGEHIEPSSAQVAALRARR
QAGKTALRLPAGALRRAAAMIAQARRPVFYGGGGLINSGSQACEVFTELVRKTGSPCTLTLMGLGAFPASDPQFVGMLGM
HGTLEANLAMHHADLVVCIGARFDDRITGKLSEFCPHARKIHVDIDPASINKVVRVDAALVGDCLPMLQALSAELDALSM
PAQRLTDWWQRIEGWRKRDCLAWPGLAAPARRHFASATDGPAQRRAECPRCHRIDRRGPASDVGCAIPAF
>AHV94794.1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Bordetella holmesii ATCC 51541]
MVHTSQKKGRVVVGMSGGVDSSVTAWLLKQQGYEVIGLFMKNWEDDDDSEYCSTRQDLLDAASVADLVGVEFEYVNFATE
YKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMAWGAEHIATGHYARVRGVDNDRGRRFQLLKAFDASKDQSYF
LHRLNQAQLARTLFPLGELHKTEVRRIAHEIGLPNAAKKDSTGICFIGERPFREFLNRYLPTAPGPILTPQGKHLGQHHG
LAFYTLGQRKGLGIGGVKGQQRDDGTADAWYAARKDLEKNALYVVQGHEHPWLLSRRLHAQDVSWIDGHAPEPGAYAAKT
RYRQADAACHLSLEAQGFSLSFDQDQWAATPGQSAVLYDGDVCLGGGIIN
>AHV94795.1 enoyl-CoA hydratase/isomerase family protein [Bordetella holmesii ATCC 51541]
MQRQRILQDRVTEHLIVEKRGSAGWITFNDPERHNAVSFAMWEGIPLALQALADDPAIRVVVLSGAGERAFVSGANISQF
DTLRSGEQAVQAYERVAEAAQLALYNYEKPTIARIKGYCIGGGLNIALCCDLRLASEDSSFAIPAGKLGLGYRMTAIRNL
VTATGAARALEIFLTAARYPAPQALHLGLLHKVVPAAELDVELQTYIDQIGANAPLTLMAGKKMIRQMQQLGPQIDLQAM
TDLVLACFESNDYREGRRAFAEKRSPVFTGT
>AHV94796.1 NRDE family protein [Bordetella holmesii ATCC 51541]
MCLAVIALNQVACIPVLIAANRDEFHARPTAAAAPWPGEPRLYAGRDLRAGGTWMGAADNGRYAVITNYREVGHQVADAP
SRGALVERYLAGSIAPHDYLMDVARQASAYNGFNLIVGDHQGAWYYSNRDTAPRYLSTGVYALSNHLLDTPWPKLVRLKT
AVAQVLAHSPQPNLPALFAALDDREPADDAALPRTGLPLARERLLSSPFIVSPDYGTRCSTVLLWRDNGVGELHERRFTP
EAHVAGETDLTFPYASGLIERPSRLAPLGLGKRSRTACNRQRVIDPVKIALSEEYRP
>AHV94797.1 hypothetical protein D560_3728 [Bordetella holmesii ATCC 51541]
MRRADRPKRRRQGQQRSGGGVHAAVAEGLRLIHGLLLFGF
>AHV94798.1 diaminobutyrate--2-oxoglutarate aminotransferase [Bordetella holmesii ATCC 51541]
MDLKIFDRMESEVRGYIRSFPVIFSQARGSVLIDEEGREYIDFFSGAGTLNYGHNNPVFKEKLLDYLAADGVVHGLDMAT
SAKKRFLETFERVLLKPRNWKYTLQFTGPTGTNAVEAALKIARQVKGRSNIISFTHGFHGVSGGSLSVTANMKFRDAAGY
ALGNTTFMPYDGYFGPDVDTIAYLERMLDDPSSGLDKPAGVIVETVQGEGGVNVATLRWLKELEKLCRRHDMLLIVDDIQ
VGCGRTGSFFSFESAGIRPDIITLSKSLSGFGLPMSLVLMKPELDIWKPGAHSGTFRGNDLAFVTAAQALDSYWASDAFS
TEVQRKERVVRDWLENLAHSYPNAGLAVRGRV
>AHV94799.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQVRIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV94800.1 transaldolase [Bordetella holmesii ATCC 51541]
MPSQLQALRRHTTVVADTGDFETMRALRPTDATTNPSLILKAVQKDAYRPLLEQVARDHRGATPGEITDRLLVAFGRQIL
DIVPGRVSTEVDARLSFDTRASVERARGIIALYEAAGVSRERVLIKIASTWEGIQAAKLLQEEDINCNLTLLFSLVQAAA
CARAGVQLISPFVGRIYDWHKKAAGAQWDETARSGANDPGVQSVARIFEYYKAHGITTEVMGASFRNAGQILALAGCDLL
TISPELLAQLDASEGEVPVQLTLPAAGSPAPAEVPCGEIAFRSLLNDDAMATEKLAEGIRFFVADARKLDQLIEQACA
>AHV94801.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV94802.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MPFAPGGAVDTLGRLVAAQLTDVLGQNVVVENKPGAGGNIGSNYVAKAAPDGYTLLFGAAGNIAINPSLFSNMPFDVARD
LAPAALVSQSMNVLVVPAALPVNSVAELVQYAKAHPSEVNFGSSGNGGTTHLAGELFNAMAGTHITHVPYQGSGPAMVDL
LAGRVQLMFDNLPSAMPYIRRGDLKALGATGPARSPQLPDTPTIAQTGLADYEATTWFGVFAPAGTPQAVLDKINTAVNQ
TMQAPAIDQRLQPLGTYFQPASRAQFQALIEADTRKWAKVIKNAGIRLN
>AHV94803.1 aspartate 1-decarboxylase [Bordetella holmesii ATCC 51541]
MQRIMLRAKLHRVTVTEADLHYEGSCGIDEDLLDAAGMREFERIELYNVTNGERFDTYIIKAARGSGAISLNGAAARRAQ
VGDLMIICTYGPMSEEDSARHKPTVVLVGDGNRVKEIRKFPD
>AHV94804.1 BCCT transporter family protein [Bordetella holmesii ATCC 51541]
MTQQPRILINRPVFFISGALILALALFAVLAPVRAQWLFGAVQDWIFLNASWFYMLAVATILVTMVLVAFSRYGDIKLGP
DHSQPDYRDPTWYAMLFAAGMGIGLMFFGVAEPVMHFLDPPLGQGGTPEAAREALSITFFHWGLHGWAVYAAVALILAYF
SFRHGLPLTLRSALYPILGDRIYGPIGNAVDIFAIIGTVLGVATSLGLGVAQMNAGLNYLFDVPISTPCRSGLS
>AHV94805.1 hypothetical protein D560_0371 [Bordetella holmesii ATCC 51541]
MTRYCTLFGLFLLGASATQAAEFTPNGSLSLTQTFYGDSGNYQTTNSHPSAVLNYQFSPKWSIDLEWDRSWNRY
>AHV94806.1 flagellar biosynthetic protein FliP [Bordetella holmesii ATCC 51541]
MKPALSFCLPAAGLSLLSILALWPDGAIAQATLPALTATPGANGSQTYSLSMQTLLLMTSLSFLPAALLMMTGFTRIIIV
LGLLRSAMGTATSPPNHVLVGIALFLTFYTMSPVFDKIYTEAYEPQSAGSIGFETAVERAGAPLHTFMLHQTRENDLSLF
ANMANVPKMEDPSKVRMRILIPAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVSLPFKLMLFVLAD
GWNLLLGSLAQSFYQ
>AHV94807.1 cell division FtsQ family protein [Bordetella holmesii ATCC 51541]
MWNEARTINLIANTLAVLAVAALLLSGVAWVAQRPYFNLAAVELEPMPDSELHYVSPGAVRSAIAGRFKGNFFTVDLDEA
REIFESVPWVRHATVRRIWPNILRVRVEEQQPLALWNENQMINTWGESFTANTGELEDEDALPQFAGPDGAESLVVQRYA
ELARWFAPLDLHVKELELSPRYAWKAVLSNGMTLDLGRDPGADAPDPHGLPGALPFAARIQRFVQVWPGVAGHLEGRTVT
GADLRYPNGFALALAPLPPSENKSHSKSKPAKKN
>AHV94808.1 carboxymuconolactone decarboxylase family protein [Bordetella holmesii ATCC 51541]
MTDVSRLAPVAPGSRPELAALEARIQAARGRISPLYQVLLNSAPICEGWEAMLSAVRNRNSLPARLRELVILRVAILNRA
PYEFEAHVPHVLAAGVAPDTVQALRVHPAPADIPGLHAGEAEALAYTDAMTRDIEVSDPVFEPLRGYFDEQGLLDLTATV
AAYNMVSRLLVALRVGH
>AHV94809.1 DNA-binding protein HU-beta [Bordetella holmesii ATCC 51541]
MNKTELIDHIASKADISKAAAGRTLDALIGAVKTTLKKGGTVTLVGFGTFAVSSRAARTGRNPRTGETIKIKKAKVPKFR
PGKALKDAVN
>AHV94810.1 ribonuclease, Rne/Rng family domain protein [Bordetella holmesii ATCC 51541]
MKRMLFNATHQEELRVAIVDGQKLIDLDIETAGREQRKGNIYKGVITRIEPGLEACFVNYGEDRHGFLPFKEVARSFFKE
GVDVRSARIQDALREGQELIVQVEKEERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRVEGENRQELRDTMEQLDVP
QGMSIIARTAGIGRSVEELQWDLAYLMQLWTAIDGAARDNAAPILIYLESSLVIRAIRDYFSPEIGEILIDTDEIADQAT
AFMSVVMPDNVQRVKRYRDDIPLFSRFQIEHQIETAYSRTVQLPSGGAVVIDHTEALVAVDVNSARSTRGADIEETALRT
NVEAADEVARQLRLRDLGGLIVIDFIDMEDSKNQRAVEQRLRDALHFDRARVQMGKISRFGLMELSRQRLRPALNEGSHI
TCPRCTGTGVIRDAESSALHVLRLLQEEAMKENTAAVHAQVPVDVATFLLNEKRADIAKMEARLKVNLVLIPNKHLETPH
HHIERLRHDDPRLEEPKTSFELAEAPATDLTWSPREQEIKTRPEALVKGITPAQPAPVSAPSPVSPTQKPAEGASLGSLF
KRFMNWLSGGNEPAKPVEKPTEQAKRSAGGNRGKRGHDGQERRGDRHGADRNRNRRTPDSEGQEQRNVRGGRRPEEQRSD
TLRNEAQRPEPRGERNEQRNEARQARNVEAQANVARPAATETADEAATPRNGRNRRGRGRGRREDGTIDAQGDVQEGKMS
EQETMVAALAESVASALPAVAVQAPAADEEITGTDNEAPLSADGEGQADPERKRRRRRSRRGRRSQEDGATLDADGQPIE
TGDDADEPQSNASALIPAPAYGVTATSEPVKVEEPQPDLAPAAVPVAPAKPAPVDNAVVPVAAAAPVAAGASELSTAAAV
PAAPVAPASPVAAVEPAAAPASAPVAPVTPEATVAPAAAEPVVATAPAVPAVQPDTAAATAEVAPVVPAQTTPAQTAAEP
AATEPAAVVAAPKPASAPIVVGEAALNAVVQAAGLTWVQTDPARQAQSQAQSAADQAPARLGRERKPVAQASSAPLVQVE
TAR
>AHV94811.1 hypothetical protein D560_2458 [Bordetella holmesii ATCC 51541]
MSLLDTLSSMAGGDSNRGSAASLVPALIELVGKYPGGLSSLLNQLQMGGLGPVVASWLSSGPNEPVSPQELGAALDPGIV
SDLAERTEQDHHAVLEGLSFVLPKLVDQASPDGAVAQGQQGLDASELLGSLASLLGGRGQAG
>AHV94812.1 acetyl-CoA carboxylase, biotin carboxyl carrier protein [Bordetella holmesii ATCC 51541]
MDLRKLKTLIDLVAESGIAELEITEGEGKVRIVKFSQTLQPVAYQAPEAAAVVAAAAPAAAPAAPAAPVVQGHVVKAPMV
GTFYRSPNPGSAPFVDVGQTVKEGDALCIIEAMKLLNEIEADKSGVIKEILVENGEPVEYGQPLFVIG
>AHV94813.1 pepSY-associated TM helix family protein [Bordetella holmesii ATCC 51541]
MLAAAKIKTWYLVHKWTSLVCTIFLFIICVTGLPLIFHEEIEHLFDEGKPIVEMPADTPMASLDRITAIARAQYPNELID
YVYLDPDAPQAYVGMTPDQRKSSDLGHAVRVDVRSAELLHDGPLYSTDRFSFMGIMLALHMDLYAGLAGELFLGLMGLLF
CVAIVSGVVLYGPFMKKLDFGTVRAARSTRIKWLDLHNLLGVVTLVWAFVVGLTGVINELSTPLFRLWQATELTALLEPY
KGKPVPQQLASPQLVADTALAALPGTKITSMAYPGNLYGSPQHFTVWMRGDTPLTSKLHTPVLVDGSSGELAKVAQMPWY
LTALEVSRPLHFGDYGGLPLKIIWALLDLITIVVLASGLYLWIARRKATDARVAELVRKHQQAAAPQRKPA
>AHV94814.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANCPNAEIVYDLFHV
VAKYGREVIDRVRVDQANQLRHDKPARRVIKSSRWLLLRNRKNLDPCQSVKLDELLQANQPLLTAYLMRDELKQLWFYQH
PGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRSA
FPGIPR
>AHV94815.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPFLWERTLHRFRTNHGEQVTRAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQAR
IAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFV
AIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGK
AERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>AHV94816.1 nitrite/Sulfite reductase ferredoxin-like half domain protein [Bordetella holmesii ATCC 51541]
MAASAHVHASGAAHLQPARPARQQVQGPHQDPGQRSHPEVYAQQVEEEWLRIKDGPDTITQQQLDTIAGRFVWPDYDAAA
ASEPDPSPELALQDKHYARWLRSNVHGHKIAGYAAVSLSLKPTGVPPGDITADQMDAVADLAERYGFGELRVSHEQNLIL
ADVKRSQLPALWAELKALNLATPNIGLLTNIIACPGGDFCALANAASIPVAEAIQRQFDDLDYLFEIGELDLNISGCINS
CGHHHVGHIGILGVDKAGEEWYQVTIGGRQNGAARPLPDLE
>AHV94817.1 bacterial regulatory helix-turn-helix s, AraC family protein [Bordetella holmesii ATCC 51541]
MVDTRFATTQVDPQQQLDSWRDALAHAFGPFEVHAGQGGGAFGGSLRYARRAHLQFNDLHYQGQKLERTRGNISQLDEEF
FTFGMPLAGPLSVTQSGRRFEVEPGCVYLMNQSAPYQAVAQGQCGYRSLSISFPRAALAQRATRLESFYKLCIDDGAPGG
QLLKSYLDHLLGGMASWTDSEVGTLGEHLIDLIVLFLVQSQAGHASEHDSSVSLAHRERALAFMRRHLADTALTPARIGQ
ACGLSVSYLHRVFQLANLSVESQLYELRLAHCQRLLRDPAHAHRTIAELAYQSGFAHAAHFSRVFRQHCGMTAREFRAQS
ARQWHQG
>AHV94818.1 transposase family protein [Bordetella holmesii ATCC 51541]
MLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRR
VWCEQCGGPHLERLSWLGRYQRVTDRLAEAVSQLLESSNILAVARFFQLGWHTVKALDKALLRRAIQEPDWSQIHYLAMD
EFALHKGHRYATVVVDPIRRQVLWIGDGRSRETARAFFEQLPTGVAQQIRAVAIDMTTAYELEIQANQPLLTAYLMRDEL
KQLWFYQHPGYARQAWDHWLQQAQGSGIAALAHFALKLKAYLHGILSRCRHRLNTSIVEGINNTIKVIKRRAYGYRDQEY
FFLKIRSAFPGIPR
>AHV94819.1 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSDVATPLVDLRGVSKRFGERRETAVSRALQSLGLSRPPAVTRAVDNVDLLVRPGEVVGLVGESGCGKSTLGRIAAGIMP
PSDGDVRVNGRLPGEMSPQEAQRARLKVQMIFQDPYASLNPRLRVDEIVGEAARIHGLVDRSGFDDYVSEKLQRAGLDPA
LRQRYPHQFSGGQRQRIGIARALAVRPDMLVCDEAVAALDVSIQAQILNLFMYLRAELDLTYLFISHDLGVVEHISDRVV
IMYLGRVVESASVDEVFRHANHPYTQALLAEIPRLDTRHKTFTAIKGEIPSPLAPPSGCHFHPRCPHVMPRCKTEAPQLK
GIAIDHLSVCHLNDGR
>AHV94820.1 capsule polysaccharide biosynthesis family protein [Bordetella holmesii ATCC 51541]
MTTVPPAPFWPMIGVFSKGILRIPYLDVFLGQPVQACNRRTPVTGLSAIVGWGMRPSTHHARNYALRHGLPFFALEDGFL
RSYAPGPTTPPLSMVMDVEGIYYDASRPGTLAMMLESDKDLLVGRVHEVRCARELILAHRLSKYNHAPDAPAGRLGDVRL
AVLVVDQTRGDMSVRQAGGSPEVFETMLRAAIRENPGSRIYVKTHPEVNGGRKAGYLGTIDADVSILHEDLNPLSLMPMV
DRVYVVSSHMGFEALMAGKPVTCFGTPWYSGWGLTDDRRRALLRGRSRSMEELFAAAYFDYTRYLNPHTHERGTIFDVIE
WLVRQREQTARERGRSIAVGFRRLKASNVRPLLGLDASRVRFVRNVGEAVALKPGPQDRLIIWGADPAPELALLARSSAA
RLVRMEDGFLRSVGLGSDFVPPLSLVLDEQGLYFDPRQPSALETLLNTRAFSEDDLARARAVRQTIVEQGLTKYNVEPRR
MPDWDAGGRKVVLVPGQVEDDASILSGCTAVATNLALLREARIAEPQAYIVYKPHPDVMVKNRAGWVCLEEAAQWADRVE
TCCSVVSCIEAADAVHTMTSLSGFDALLRGKSVTVYGAPFYAGWGLTRDHHPLPRRKRDLQLDELVAGALLHYPLYWDRK
FQGYTRCESAIGQLARARERAPTTPRLAGRLLRKICMYVKGEFRLQG
>AHV94821.1 lysM domain protein [Bordetella holmesii ATCC 51541]
MDLTSPPHDAWDRIRRGFAIPNLNTDLSQQWTDYYAAHPESVQRMAERAGKYLYFIVDEVNRRGLPTELALLPFVESAYN
PTALSRSQASGLWQFVPATGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNE
AAGLATDYLSLTMPDETRNYVPKLQAIKNIIANPRKYAVALPKVDNTPYFVTVQKNRDIDIELAAKLAEMPLDEFKALNP
SFNRPVIRGEHEPTLLLPADRLAVFNANLQNYKGDLSTWSTYATRRGENYAAIAKRYGVSEARLRQINEVPARQKVAVGQ
VLLVPAAGGVDKPSGNEAVQLASLSTPVGALDKAVAPKSAARALPTTARATSARPNVRTHKVGTGDTLFSLAKRYGTTVD
ALRALNNLKGNNLKVGSQLRVPGTGTRG
>AHV94822.1 S4 domain protein [Bordetella holmesii ATCC 51541]
MPLIEFTLAAGAPYIEINQLLKATGVADSGGAGKALVADGQVSVGGVVETRKTAKIRSGQIVSHGDTRIVVRAVPSADDS
V
>AHV94823.1 hypothetical protein D560_2939 [Bordetella holmesii ATCC 51541]
MPRWQRTTAAAPDLTACAHEKRLNRQYRFRRFYLAAADAIPPAAR
>AHV94824.1 type II secretion system (T2SS), F family protein [Bordetella holmesii ATCC 51541]
MAGLPAQLPAGWLPARMALGGGVGLIAGGLVIGLMPSGISRAALAAGITFAALISASLPILALRGKVCANRRSIALDLPF
LLDVMTLCLEAGQGMTQAMYLAARYCPPGPLTRALSLALNEVRAGRSQREALEALATKLDVDGVHAWVAALVQAERLGSG
TGAMLRSLASQLREEAFQRAEEAAMRAPVKMLLPLVSCMFPCTFLILGFPLFMGVLPQDAM
>AHV94825.1 hypothetical protein D560_3033 [Bordetella holmesii ATCC 51541]
MGELQQQERPRLVLGHAQDVWRARELADACGITLALWGVPTWREEANCLWLDPAALNGWRHEEGLIVAEPGCAVGVLAAQ
GCAQFAQADPQQTIAAWLATARGFSTPADSGLRAATVMFSDGTVERVGGFGATDTQPLRSATLQNLVPALFQLAGSADAQ
ACQTAAGWSACFRLDAMLEPANLAQVLLGHGGSLAWVQDSCWTSGQAGASPCESSLAGWRLEMRMKALFDPHGRFPEIRY
PGGRE
>AHV94826.1 hypothetical protein D560_3047 [Bordetella holmesii ATCC 51541]
MNAPEIQYIVDNLFIGNRLATAGLVTSDGIRIDLRNIRSPIIVFCSKGDNITPPPQALGWITDLYQDDKEVIAHGQTIVY
AVHESVGHLGIFVSGSVARKEHQEFTSNIDMIDVLPPGIYQTEIADKTPQTANADLAQGNYVLSFARRNLDDVREIVQRL
EEDDRRFAAVARISDINLGMYRSFVQPWVKAAVTPQTAEWAQRLHPLRLPYELISDRNPAIAPIAQVAEQVREHREPIAA
DNPFLVAQQMVSQAIVAGLEIFTELRDAAVERSFMNIYGSLPAQNLAGLGARPGAPRKHPGVSPEHLDFMRTRHAELRAR
MNQGGAREAAIRMVLAVSGAGGGLDERSYAMIRRLRADSETSISLQGFKDAVRDQALLMLMDGPAAVRAIPKLLENVSAD
GIRLILATMRHIVEATQPLTPRAQEVLQEMERLFETAERRARRREGGQPQDLSQLPLIDAFGATEVGRAALQASGLELPD
KRRASRLTDKPAAGRAAKTATKTAATKVATKTPGKTATRKAAPKKSTTAARTAAAKTADKPARKSADVIPLKQPRTRKRG
>AHV94827.1 efflux transporter, RND family, MFP subunit [Bordetella holmesii ATCC 51541]
MTLTDPTPMTRFARLAAAALACGLVAACGRESNTAFQGYAEGDFVAVAPTQSGRLLSLDVERGQQVPQAGLLFTLDHDKE
TAARDEAQARLTAAQAQLADTASGKRPPEVAVVRSQLARAQAEQTRTDAQLARDTRQYQDGGISRQELDNTRASANANRA
QVRELQAQLEVATLPARDQQRQAQQADVQAAAATLAQADWSLAQRRVQAPAQSLVFDTLYRPGEWVNAGSPVVRLLPPGN
IKLRFFVPQDQVGRLRVGQPLSIACDGCGGAIPAHISYIATQAEYTPPVIYSREVRDKLVFLVEARPQADQATRLHPGQP
VDVRLDETAP
>AHV94828.1 phosphonoacetaldehyde hydrolase [Bordetella holmesii ATCC 51541]
MALKNAIALGIDDVAGCVKVDDTSVGVEEGRRAGMWSVGVLLSGNAAGLSLSEWQALQDDARNQARERARQVFAPAQPHY
FIDTVAELPGVLSAIAARLARGERP
>AHV94829.1 cysteine--tRNA ligase [Bordetella holmesii ATCC 51541]
MLHIYNTLSRTKEVFTPVHAGQVRMYVCGMTVYDYCHLGHARMLVSFDVIQRWLRASGYAVDYVRNITDIDDKIIRRAVE
TGRRMHEVTEYYIDAMHADERALGVARPDQEPRATEYVSEMLDIIGRLQQNGLAYQADDGDVNYSVRGFAGYGKLSGKSL
DDLRAGERVAVDSSKRDPLDFVLWKSAKTEEPPETKWESPYGFGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKFPHHEN
EIAQTEGAFGGTLANVWMHCGPLMVDADKMSKSLGNFRTIRQTISQNEGPGNRADYVVNPREAEMLRFFIVRNHYRSAQN
YTPDNLIDAQNALDRLYQALQNVPADTAGIDWTEAQAQAFKAAMDDDFNSSGAVAALFELAGRVNRERDSRAAGQLKALA
ALLGLLQQEPQVYFRSPTRYSAAAMQQEGAGAQLEAGQIDALIVERAQAKQARDFARADAIRGELRAAGIELDDKPGGVT
QWRRA
>AHV94830.1 eamA-like transporter family protein [Bordetella holmesii ATCC 51541]
MSRTHSPPNLEGYAFGLLGVLVFSLTLPMTRLAVAEMPPLLVGLGRALVAALPAAVLLLATRSRLPTRSEFSGIVLAAAG
IVVGWPLTSTLAMASVPSSHGEVVNGLLPLSTALFACWRSAERPSPAFWAWALVGALLVMGFILSQGHGALQPGDFWLLV
AVVLGGLGYAEGARASRTLGGWRTICWALVISAPFLAGPVWWLAAHAAMPGAHALWAFGYLAFFSMFLGFFAWYRGLAVG
GIARVGQLQLLQPFLTVLAAALLFQEQVPPIPISLPWRWCWSSRVVAVASSAHANLFSPRLPSCPSTLCPSCRCRCSALW
PCSRWYRPSPRAQQRHAGLIGADIRFSPQHSAHAGSDHRILLHDSAGGAGPGRAFQSVSLALFGPQVRRRPLSAVPGLED
RLLRPP
>AHV94831.1 cyclase family protein [Bordetella holmesii ATCC 51541]
MKRWTQRPEGSTWGDFGENDQLGRINLIGQEQVLKGIREVRQGTVFCLSLPLDLPGGMALNPRRKPPRLSGTERDGVPYM
NFPMEKLDPSSIDVLSDDQVVMSLQYSTQWDALAHVGAYFDTDGSGQPRKVYYNGYQAGQDILDASTADDGHTDCCGSGT
HAMGALKLGIENFAVKGMQGRAVLVDFTRHYGRQRQLIGHRELMDVMQKDNVTVERGDMLVLRTGFAELISEMAGNPDPE
ALHHACCVLDGADQALLDWISDSGIAAICANNYAVEAYPARQREGKKSLLPLHHHCLFKLGLPLAELWYLKDLAEALHAA
GRSRFLLTAPPLRLPGAVGSPVTPIATI
>AHV94832.1 marR family protein [Bordetella holmesii ATCC 51541]
MFEADRIVTEERHREVDLSKFGEPPAAQTGAAADIAAILSQQLAVYATANQAAVAEKLGLSVTEIKALELVQELESLPTG
QLGQLLGISWGGATALINRLEAAGFVQRGRHPLDRRIIVIHPVAERCKELVQARQAVLEEVHFLSRQFDPQQMRAVQAFL
LQYVRSLRHDTQVWLQTRTGRDLMEV
>AHV94833.1 sugar (and other) transporter family protein [Bordetella holmesii ATCC 51541]
MLLPIVLLSAAGFTILTTEFLIIGLLPPMARELQVTVSQAGLLVSLFAFTVASTGPLLTALAARLERKRLFIGILVLFGL
SNVLAAYAPNIWIMAVARFVPALALPVFWSLASATAVEVVGPAHAGRAISMVAFGIVAATVFGIPLGVLISDALGWRAAF
GLLAALSFAKALLLAWRFPRLRSPRDGLRLAAQLRIARDPIVLAHVVLSLLVFTGMFTAYTYLADMLERLAGLDARLVGW
SMMGFGAIGILGNTLGGRLVDKTPLGATALFTALTAISLAILSLTMRAPLPLALTLGAWGIAQAALFIVCHVRVMKSAPQ
APAFAASLNISGANIGIGLGAAVGGNVIDQWGLHALGWFSSLILLAALTLAIALMACTRRRQTTTASCDAAVSQA
>AHV94834.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MQDLNDLFYFSQVVDQGGFSAAARVLDLPKSRLSRRISQLEERLGVRLLQRTTRRLRLTTAGERYLHYCREMTSAARAAD
EAMRQMQTQPAGPVIVSCPISIAQQLLAPLLPEFLDTWPEVSIQMLATNRWVDLISEGVDLALRVRTKLDTDAELVVRQL
GAATSTLVASPAYLQRHGTPESPEALVQHNTLSFNDPQTEVIWSLHDGQGQERAITVAPRLCCNDFIVLTEAAVRGRGVA
LLPSAATEAELRRGELVPVLPDWRSPEGIVHCIYPSRRGMIPAVRPFLTSCSNACHRAMSAWD
>AHV94835.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MFYRENGQFKTSYRADQQIFPIRQDRIFFGLLMAVAFVAVPLLVSDYLMRAILIPFLILALAAVGLNILVGYCGQISLGT
GAFMAVGAYAAWNIGVRFPGSPLLLQILIGGGFATLVGVIFGIPSLRIRGLYLAVATLAAQFFVDWAFLRIPFFTNYSAS
GSVSVPPLTVFGMPVQSALQKYLFVLILVVVFTLLAKNLVRGAIGRQWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSFIV
GVAGALWGYIHLGSWEPLAFDLGRSFQLLFMIIIGGLGSILGSFFGAAFIVLVPVALTNIPHILGLSLSVDTAAHVEHMV
FGALIVFFLIAEPHGLARLWSIGKEKLRIWPFPH
>AHV94836.1 aminomethyltransferase folate-binding domain protein [Bordetella holmesii ATCC 51541]
MSASLKRTPLAETHLAAGARMVDFGGWEMPLAYGSQLEEHHAVRQDAGMFDVSHMLNVDVAGADATAFLRHLVANDVARL
TTRARRCTRACSTRKAV
>AHV94837.1 3-oxoacid CoA-transferase, B subunit [Bordetella holmesii ATCC 51541]
MAWSRDEMAARAARELQDGFYVNLGIGLPTLVANHVPKGVEVWLQSENGLLGIGPFPTDDEVDPDLINAGKQTVTTLPGS
SIFSSADSFAMIRGGKINLAILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVGRVVVLMEHVAKKKDGSEDIKLLP
ECTLPLTGVGVVNLIITDLGVMEVTPAGLKLLEVAPGVTVAEVQAKTQAKLDVSAIR
>AHV94838.1 cyanophycin synthetase domain protein [Bordetella holmesii ATCC 51541]
MEVSRIRVLRGPNLWSRNTAIEAIAACADNECSIDNMPDFEARLRARFPQIGLLLPEGHSGSVSLAHVLQACALALQAHA
GCPVTFGRTSTTIEPGVFQVVVEYSEEEVGRLAMELAQALLESARLDLPFDLPQALARLRELDEDVRLGPSTGSIVTAAT
SRGIPFHRLTQGSMVQFG
>AHV94839.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MHALIINRRTRAGLAASALSLLGWGASLTPAAAESYPSKPLTVVVPFAAGGTVDKVARQLQQSLQDKLGQTVVIDNRGGA
GGTIGTALVAKAPADGYTVEMVFDSYATEQHIYPRLPYSTEKDLTGVSYMVRSPMVLVVAPGTPYRSLADYVAAAKHGNV
SYASVGPGSSNHLAAELFHQTAGSSGLHTPYRGGGPAITDLLGGHVESMIASLPLVLPHIQAGKLRALAVTAPSRVPALP
QTPAVAESYPGFEIYSWVGMVAPAATPADRLDKLSQITIEALRDPAVAQRINESGFDVVAGGREEMNALVKSESDRWGKL
IKAQGIVAQ
>AHV94840.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MLLRRYEQRRKTRWLRLWRDSLFTKDPAGARLAIPLAACLVYLFAECALSAWLIELCAVDAYEAASSTVCIVGRTLSACA
IVLVVWPMLRVHTRRNRALLVSCVLVAGLAWAGTGIERAVLAQWVEDSSAQSRVAALTSMPRRSSLPDDEPESISLAARW
PNGMPVSVSGKTVAAMIGFLVKSDPMPPDEAGLEQAYQRYVNSQFTIRDRFLAYRDPDAFRHQAMGRWQEKGHVSMTASR
GEQTAFAARGQTVLQQQAHIDGLPSGLSLGQFAAHPLVQESWRTLLGYPPGSPPLSLTPLGRENFALYYFRPFLSAHAVQ
AAGRSTLAPQRYVNGAEHEAQGRRAYERMVAPILGLALSLLGMLTQLCRAGLLLIQYASGWRFRRVGFELAALAAGVWLI
CLAASCLPLPLTAEPPYALWSASEGAGSRWLDGLMRLEVIGYPLFDLVFHLLP
>AHV94841.1 putative lipoprotein [Bordetella holmesii ATCC 51541]
MAALTSSAQAQTLAAPDGQTTFEQVVAAAGATNGAARLCGASQPDLLQHESNWQVNLKRYAQEYRYDTAALKARFTQGQE
TGRQMMEQMRQASVDGCAGVLGSFQRERAIGYGEMKQAIAEVTDGLPQAPAR
>AHV94842.1 hypothetical protein D560_3484 [Bordetella holmesii ATCC 51541]
MNAFFRPVRGLAVVMAVLSGLAACAGHERASLVQVRNGEGDRIVILSRAVAAAVSGDDGRRLPESSRWRRIGAVPQGDVY
RRLDDRFVVRTQGREREAYLVESNGKLMGFYLPGESWFVPLSSPVRLPNWQR
>AHV94843.1 O-Antigen ligase family protein [Bordetella holmesii ATCC 51541]
MDNRHWSRRIKAVFVAGVAAFMLAGLVFSWNSSGSRMSEVWSEIKRYEHQDRDTSTGIRMQLWHASWLMFKEHPLVGVGA
PNFRDELARFEQRGIVTPRVAIDYGEPHNDYLAALACYGLIGLLSFLALYFVPALVFLRRLRSTDNLVREGARIGLLFTL
GYAVFSLTEMMFRNMRSVPIYAITMVVLFALTREKSPSDASQDT
>AHV94844.1 pyridoxal-phosphate dependent enzyme family protein [Bordetella holmesii ATCC 51541]
MSFSDVQQAYERIRSHIVRTPLLESATLNELLGARVLVKAESLQNAGVFKFRGAVNRLLQLSPAQRQAGVVAFSSGNHAL
ATSAVARKLGIPVSIIMPSDAPKAKIDGARANGATVVLYDRQKDDREAIGAEIAGRTGAAIVPPYDDLDIMAGQGTVGLE
IVEQARAMDARLDAVIAASSGGGLVAGVAIAVKALSPDTAIFAGEPAGFDELARSLASGQPESNAPGAVSICDSLQVIKP
GKLTFPVNLHYLAGSLVVTDDEVRRAMKAAYQHLRLVVEPGGAVPLAALLAGKLDVAGKTVAIVLSGGNVDTSVFIEALN
A
>AHV94845.1 fecCD transport family protein [Bordetella holmesii ATCC 51541]
MSAAAAFGAALAITLDWQLPVLPAALTVSVCAFAAALAVSFVGTVGFVGLVAPHIARVLAGEDHRFYLPASAMAGALIMS
LASVASKTLLPGVLVPVGIVTALVGIPFFLTIVVRAMRRG
>AHV94846.1 thioredoxin-disulfide reductase [Bordetella holmesii ATCC 51541]
MSTPKHAKVLILGSGPAGYTAAVYAARANLSPALITGLAQGGQLMITTEVDNWPADVQGVQGPDLMQRFLQHAERFNTEI
LFDHIAKVDLSRRPFTLTGDTGNLYTCDALIIATGASAKYLGLASEQTFMGRGVSGCATCDGFFYRNKDVVVIGGGNTAV
EEALYLSNICRKVTLIHRRDKFRAEPILVDKLMDKVANGNMELKLFHTLDEVLGDDSGVTGVRIRSTETDATEDLDVDGC
FVAIGHQPNTGIFEGQLEMKDGYIITKSGLSGMATMTSVPGVFAAGDVQDHVYRQAITSAGTGCMAALDAQRWLENAGQ
>AHV94847.1 adenylate kinase [Bordetella holmesii ATCC 51541]
MRLILLGPPGAGKGTQAAFITQAYGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVSDEIIIGLVKDRLSQPDCSNG
YLFDGFPRTIPQADALKEAGVKLDYVVEIAVPDEDIVQRMSGRWVHMASGRTYNVQSNPPKEAGKDDVTGEPLTQRDDDR
EDTVRNRLAVYQKQTRPLVDYYSGWAAQDAASAPQYRKISGVGSVEEIKARLAAALHN
>AHV94848.1 hypothetical protein D560_2446 [Bordetella holmesii ATCC 51541]
MLYYAVVFFVIAIIAAVLGFGGIAAGAAGIAKILFFVFLVLALLSILSGTLRKK
>AHV94849.1 propionate--CoA ligase [Bordetella holmesii ATCC 51541]
MYEEVNAVAAMLREQGVGRGDRVLLYMPMVPEAVFTMLACARLGAIHSVVFGGFASVNLAQRIDDAQPKVVVCTDGGSRA
GKVVAYKPLLDKALSLARHPPAAVIVLDRGLAACEREPGRDLDYAELRARHAGAQVPVTWLESSEPSYILYTSGTTGRPK
GVQRDTGGYAVALASSMEYLFDGKPGDTFFCTSDIGWVVDHSYIVYGPLIGGQATILYEGTPVRPDGAILWSLVERFRVN
TLFSAPTAVRVFKRQDPALLKRHDLSSLRALYLAGEPLDEPTAQWISDGLGKPIIDNYWQTESGWPILSAQPGVERVPTR
FGSPSFPVYGFDVRVVSESTGEDLGPNEKGVVAIVPPLPPGALSTVWGDDERFVQTYFSSIPARQLYSTFDWGLRDEDGY
WFILGRTDDVINVAGHRLGTREIEESVNSHAGVAECAVVGVADSLKGQVALAFVVLKRPDDAQADDAARSLEADIMRVVE
NQLGGVARPARIRFVGALPKTRSGKVLRRAIVAICEGRDPGDLTTIEDPSSLEQIKESLQ
>AHV94850.1 relA/SpoT family protein [Bordetella holmesii ATCC 51541]
MAFPGLKYASSGLLAALRAGSRLGRRGGKKARNRAGSSSAPQIDDTSEISPPPIASLAPLTEIINTYLEPKDVERVREAY
RFADQAHLGQFRASGSAYISHPIAVTEICAGWKLDANALSAALLHDVIEDQGVAKQELAERFGPEVAELVDGLSKLQRLD
FATKAEQQAESFRKMLLAMARDVRVILIKLADRLHNMRTLDAVNPEKRRRIARETLDIYAPIAHRLGLNLLFRELQDLCF
AAMYPNRYQVLYKAVLAARGNRREVISKIEDSVRAALPAAGIEAEVTGREKTLFGIYRKMADQKKTFSEVLDIYGFRVIV
HTLPECYLALGTLHQLYRPVPGKFKDYIAIPKVNGYQSLHTTLVGPYGTPVEFQFRTRDMHHIAEEGVASHWLYKDADLT
LNELQKRTHQWLQSLLDIQSQTGDSGEFLEHVKVDLFPDAVYVFTPRGKIIALPRGATPVDFAYAIHTDIGNQAVAAKIN
SEFVPLRTELASGDTVEIITSPASRPNAQWLNYVRTGRARSEIRHFLRTVRYEESVAFGERLLVQTMQELHLPMPPADDP
VWDKLARSTGATSRDEILADIGLGKRLAAVVARRFAPEHDLVATTAAAVDEIISARAAPILIQGNEGQAVQLAPCCGPLP
GDPIIAGMRLGHGLVVHTADCPVAARQRLREPERWVTVAWDKQTAKHLATRLDIITRNERGVLGRIAAEVTAADANIVQV
TMHDDAVSTVSLHLTVQVDSRKHLAQVIRAIRHVPQVQKIVRVKG
>AHV94851.1 hypothetical protein D560_1937 [Bordetella holmesii ATCC 51541]
MRLSAAEILFAAFEWLGESCGNARSARVAIPGAALRAAIPEKNWHPA
>AHV94852.1 rhodanese-like domain protein [Bordetella holmesii ATCC 51541]
MSIVDIAAYKFVSLTDAAELRESLLAQTQALALKGTILLAPEGINLFLAGTQAAIDSFLDSLRQDARFADLEVKFSLSQT
VPFGRMLVKLKREIIRMDHPTIRPEAGRAPSVDAPTLARWLEQGRDDAGREVVMLDTRNAFEVDVGTFRNAIDWRIERFT
QFPDAVREHRAELEGKTVVSFCTGGIRCEKAAIFMGEIGIEHVYQLEGGILKYFEETGGPGYDGPASSSMSG
>AHV94853.1 type II/IV secretion system family protein [Bordetella holmesii ATCC 51541]
MNEAVVSLHAVAQLQPPLKRVLDAELELGGLRGHICPVLLANGQVAVLAQARYVRGAWMNEILRQLDDKGYSLARPVCYQ
VDAALLLDLLRPFRAPSALPLAPRESVPPGGRPTLALLFEDIVRAGLGAGASDIHLNVLGQDRAEVRYSIDGRYVSLPEV
RALTRATTLATLLRGLSRTRKIITLEDPVEIRITDALQNTVGRGLDADHDGVFDAKLKTIKRSAMNDVYLGEVRDRETGR
AFMDLAGSGVSVYTTVHAGSAQGIPARLSSDFIGIPADFLQMRGVLKLLVY
>AHV94854.1 tripartite tricarboxylate transporter TctB family protein [Bordetella holmesii ATCC 51541]
MNLTNRSFVRGLFIMLIALVFGGAALRYPLGTFSRSGPGLFPLMISIMLFLVGLATVIRARFAAPEPLNYNFKNILIILV
ALCGFVVVSHFLSMLLGIAFLVFVSTLAGTSYSVVRNLKISAGLIAVAFGFKYLLGLNLPLL
>AHV94855.1 hypothetical protein D560_2048 [Bordetella holmesii ATCC 51541]
MNSLIDRRLNGRNKSAVNRERFLRRYKDQIRKAVQDMVRDRSIADMDQSAEINLPARDISEPYFRHGEGGDREMVHPGNK
EFAKGDTFDRPQGGGGEGGRGEPGEGESVDQFTFSLSRAEFLHLFFDDLELPHLVRTQLGDVSQKKWQRSGYTTTGSPSL
LSVNRTLRASLSRRVALGLNARSEVGQAESRLQQAIDEHESEAQLAPLRVLLEECRARAARVPFLDELDLRYRNRVPVVT
PVARAVMFCLMDVSGSMDEGKKDLAKRFFTLLYLFLSRKYETVEVVFIRHTDNAEEVDEQAFFYDPKSGGTIVLSALELM
HEIVQKRYPPSAWNVYAAQASDSDFFGADAGKSARFLAEKLLPATRYFAYIEVPDSVQARKSSLWAEYEQETAPHFAMRR
ISQRSEIFPVFHELFKKEAA
>AHV94856.1 outer membrane family protein [Bordetella holmesii ATCC 51541]
MMSDYALNTSGRRAGKLATSLALAGALLFGSAAVTTAQAQGTKIGFVNTERILRESGPAKAAQSKIEGEFKRRDDELQRM
GTQLRSQAEKFDKDAPVLSESDRVKRQRELSNLDMDLQRKRREFQEDFNRRRNEEFSGIVTKANEAIKRIAEQENYDLIV
QDAVTVNPRVDITDKVIQALGR
>AHV94857.1 bifunctional FolC family protein [Bordetella holmesii ATCC 51541]
MLPRPDATAGLADWLHYLESLHAKTIDLGLERVKAVAERLALHLDAVTFTVGGTNGKGSTCAMLEAILLAAGYRVGLYTS
PHLIDFNERARVNGEIASDAALIEQFVAVEAARGDTSLTYFEFTTLAILRLFSQAKLDAVVLEVGLGGRLDAVNIIDADV
AIVTSVDLDHMDYLGDTREKIGFEKAHIYRAGRPAICSDPVPVQSLLDHAAAIGADLRLFGRDFNYSGDRQQWAYGGRDV
RRSSLGYPALRGANQLLNASAALAALEAVRMRLPVPQQAVRLGLLQANLPGRFQILPGQPTVILDVAHNPHAAAVLAQNL
DNMGFHPYTHAVFGMLSDKDLPGSWPSSQAASTTGIAPDCRARAAATARPLPRNCGRPCQPRRQAPKPLPSPPMTAPRKP
MPLRAARQVRVIES
>AHV94858.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MLLREIQELGYPGGVTQLKEFLGGYKHQEPEPVVRFETPPGKQMQADFTHIRRGRDPLMAFVATLGYSRSSWVRFTTDER
ADTWFGCLRQAFIYFGGVPQHVLFDNAGAIITERDAYGPGQHRWHNGLLAVAQEFGFTPRVCQPYRAKTKGKVERFNGYL
KGSFCVPLAATLKQAGLRFDVTAANAHVGRWLTEVADQRLHGTTRERPAKRLQEERLALLQLPAQHGMLVPATSHRPVPR
ESFQHPLSVYNELLEVRA
>AHV94859.1 peptidase M50 family protein [Bordetella holmesii ATCC 51541]
MLTAAGQPVADAGALVRVVQEYAGKPLALTLVRDGATLDLTVTPRAETVQGKVIGRIGVQLGGDVPMVTERFGPVDSLWR
GVQRTWDTAWLSLRMMGRMVLGEVSWRNISGPVTIADYAGQTTRIGLEAYIAYLALISISLGVLNLLPIPMLDGGICCTI
SSKLSEAVPCPTVG
>AHV94860.1 DNA gyrase, A subunit [Bordetella holmesii ATCC 51541]
MHRRVLYAMHELNNDWNRAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAMRYT
EIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMATNIPPHNLGEVVEGCLYCLRNPEC
TIDELLEIIPAPDFPTGGIIYGMSGVREGYRTGRGRVIMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVND
KKIEGISDIRDESDKDGMRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIDYFLQHRREVVT
RRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARAWDSSLVREMLARADGGEVAGGRHAFRPDD
LPEGFGLQGDGQYRLSETQAQEILNMRLQRLTGLEQDKIIGEYKEVMDTIADLLDILARPERITTIIGDELQAIKAEFST
AAKDSRRSEIEFNATELDTEDLITPMDMVVTMSHGGYIKSQPLSEYRSQKRGGRGKQATQMKENDWVDQLFIANTHDYLL
CFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKITVVLPVKEFSEDHYVFMATSRGTVKKTALSDFSNPRKAGI
IAVDLDDGDYLIGADVTDGKHDVMLFSDAGKAVRFDENDVRPMGRAARGVRGMMLEDSQTVIALLVAGDESQSVLTATEN
GYGKRTSIAEYTRHGRGTKGMIAIQTSSRNGKVVGAVLVNPSDEIMLITTGGVLVRTRVSEIREMGRATQGVTLISVDDG
SSLSGVRRVVESDADDDESAEDDGEGQIDSTEEPTE
>AHV94861.1 glutathione S-transferase [Bordetella holmesii ATCC 51541]
MKLYYSPGSCSLAPHIALQEAGIDFELAEVSLDAHQLDDGGDYFAINALGYVPVLELPDGTRLHETLAILQFLAEHTASG
NIDAVRRAQLAQWLAFIGTELHSVYYILFSPDADEAFQQATRAKLRARYEWVESQLQHHDHLTGASFSVADAYLFAVTNW
ADAVGVDLKGLPRLQAWLKRVAERPAVQDVLRREEG
>AHV94862.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein [Bordetella holmesii ATCC 51541]
MVAAFRVITARSPVTAVLHLILAFVNAAMLWMLLGAEFLALLLVLVYVGAVMVLFLFVVMMLDIRIDHLRHGLKTYLPLG
LVVGLILVLEMGFVLFATWGDAGPQVAMAGDYNNARALGEAMYTQYVFGVEVGAALLLVGMVAAIALTLRRRRDAKYNDP
VAAVRVKAKDRFRMVKMTAQSERAQGNSAAEQGEKP
>AHV94863.1 thioredoxin [Bordetella holmesii ATCC 51541]
MSIVELTKDSFQDAITPDGTLIIDFWAPWCGPCRGFAPVFEQAAEKHGDVTFAKVNTDVEQELAGALGIRSIPTLMVFRE
KVLLFSQPGALSAGQLEELLTKVKEVDMAQVHRDIAEAQEKAEGDPA
>AHV94864.1 bacterial regulatory s, tetR family protein [Bordetella holmesii ATCC 51541]
MSPCDPTARRSSLPPGGRVTRRGRDRSDRLLRVAADLFLDHGYDNVTLDEIVAQTGGSKTNIYRYYGSKQAFFCRVVEYL
CDDFLAALSDLDVQTGGLEGALSRLARALIHAMLNPRQVAFYRMVVATSARLPEVGRAWFAHGPVASRVAFTRLLQVQID
LGAIHPDTRIDEVATQLHGALVYDFFTRTVMLGAHPDSVAIDAAVDALVRSARRWLSIEA
>AHV94865.1 hsp33 family protein [Bordetella holmesii ATCC 51541]
MTDLLKKYLFEARTVRVQSVRLQDTWKQAQSHQQYPEAITRLLGEMVAASALLAANIKFEGSLVLQIQGDGPIALLVVEC
RSDLSLRATVKVREGHDVPADGTLQSLLNAEGGGRFIVVLDPERKVPGQQPYQGIVPLEGETVAEALEHYMKASEQLDTR
LWLAANGEVAAGILIQRLPDQGGNEVEQQAPGETWNRALHLAGTLTAQELLATDMDTLIHRLFWEETLIAFEPATVRWFC
PCTRERVAGMLRTLGQAEVEDILAEQGKVEVHCDFCGKPYRFDPVDCAGLFAAASPHPEQDPPTVH
>AHV94866.1 alternative sigma factor RpoH [Bordetella holmesii ATCC 51541]
MNSASPSLATSGNALALAVANPGALGTIDAYISTVNRLPVLTLEQESSLARRLRDGDDLEAARELVLSHLRLVVSVARQY
LGYGLPHADLIQEGNVGLMKAVKRFDPERGVRLVSFAVHWIKAEIHEYIIRNWRLVKVATTKAQRKLFFNLRSMRPDGQT
LDTEQVDRIARELNVRREDVSEMEVRLSGRDLSLENQDDDDDSYAPIAYLSDECREEPTRVLERKARDDLQGQGLADAIK
ALDARSRRIVEARWLQDDGGATLHELAAEFGVSAERIRQIEAAALKKMRGTLAAA
>AHV94867.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MKQFNICPQRLLAGLALVLPTFFVSGAASAEDYPSHPITLVVPFSAGGGTDSIARDVARTLSDRLGQPVVVENRGCGGGP
IGATLVANARPDGYTLLFATSTFVTNAAAEISTNYDVIKSFTPIAMLGRGPLFVVSAKDLKLKSVADLRTLAAKPDAELN
FCSAGNGSINHLAGELFKQKTQAAMTHVPYKGSGPATVDLLAGRVQVFFATVPTILSQVRDQRMDLLAVTGKERSPLFPD
TPTVAESGIADFDITTWWGVLAPAGTPPAIIGKLNAAINDAAADKLVADRLRHEGAQAIRGTPDDFGQALATELQMWQGV
VKQSGMALD
>AHV94868.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSV
RKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRG
LPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTD
RPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
>AHV94869.1 branched-chain amino acid transport system / permease component family protein [Bordetella holmesii ATCC 51541]
MLAALLILIVVLLAIAPFVFPGPRALAVAAKILVFVVLVASYDLLLGYTGVVSFAHTMFFGIGAYGVAIASTRMEPGWAA
VGAGLLIALAVSLLLALLIGLASLRVRAIFYAMITLAVAAAFQTLSSQLSWLTGGEDGLNFKVPHLLRPAYKVFREPVLG
LNIDGRIITYYLIFSAAVVLFLLLLRIVNSPFGRVLQAIRENAFRAEALGYRSVIYRSASNVLAALFATIAGALYALWLR
YNGPDTTLSFEIMLNVLLMLVIGGMGTMYGAVLGATLFVFAQSYLQDGLQILHAATASLTLVAPWFEPDRWLLWLGVLFV
LSVYYFPGGIAGKLRG
>AHV94870.1 protein ApaG [Bordetella holmesii ATCC 51541]
MKPYDLTVSVTPRFVPEQSDPSQQQFVFAYTVRITNTGAHPAQVISRHWIITDGNQRVQEVRGLGVVGQQPLLAPGETFE
YTSGCPLPTPVGTMRGTYHCVGENGIPFEVPIAEFLLAMPRTLH
>AHV94871.1 pyridine nucleotide-disulfide oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MKSFDVVVIGGGILGMAHAWASARRGLSVAVVERARQAHGATIRNFGQVLVTGQAPGDMANLARQTRALWLQLAGQAGFH
VRANGSLVLARTAQESDVLEEFASHRLAAEGYAARLLSNRELAAFYGGRLEHHCAALRGEDDLQIYSREALPAITRHLGD
DLGVAMIHGTLARKVEGGEVDTTAGRFKAGHVFACPGHDYLMLWPEIFAPLNLELSRLQMLRVAFVEQAFEVDMPLLTGL
SCVHYGAFSDLPSAQRLRQTFEQHSPFLMREGIHLLISPTPYGELIVGDSHRYGVDALPFNDEAVDETLLSLAQQALGAR
LLVLERWQGVYGAHGPAPYSVLQADTQTTVSVMHSGVGMTVGLAIGERAVAAALG
>AHV94872.1 aldo/keto reductase family protein [Bordetella holmesii ATCC 51541]
MQYVKLGNTGVKVSRLCLGCMTYGDPQRGKHPWTLDETQSRPLLRQALDMGINFFDTANSYSDGSSEEIVGRALRDFVKR
DDVVIATKVYFPVGEHRGGLSRKAIMREIDASLARLGTDYVDLYQIHRWDYATPIEETLEALNDVVRAGKALYIGASSMH
AWQFARALSLSEQKGWARFVTMQNHYNLMYREEEREMLGLCADQKIGVLPWSPLARGKLTRDWDESSQRADSDEVLQSIY
RATAESDRLVVQAVAEVAAARGVSRAQVALAWLLHQPEVTAPIIGASRPGHLEDAQAALALRLDADEIARLESAYVPHPV
AGFTQARR
>AHV94873.1 bacterial regulatory s, gntR family protein [Bordetella holmesii ATCC 51541]
MVGVSRLNCVAPMLSAPGDGHGPIATWIASVSLCVLFLYAKIYKTSETSMPIPARHSQAHAAYTEIKRRILAGMFTPSDR
LREVEVADMLAIGRTPVREALKRIQDEGLITHEPGRGLVVTTMDQQEVGELYSMREVLEGAAAAFAARHATDAEIANMQA
LLDEGDHGDPVAQNLRFHEAIYSAAYNRYLLRSLQSLTETTYLLGRSTLSSPERASRSHHEHQAIVQAIRARDVQGAQDA
ARHHIHQALLERLKMLRQG
>AHV94874.1 tonB-dependent Receptor Plug domain protein [Bordetella holmesii ATCC 51541]
MRLATAGVMLWMASAAAWADDINVALPAQPLDQAIRTLAQSQGLQIFFSSDLVRGMQAPAVAGRMSARQALDALLAGKPL
RLREDGDAYILEPAPAAAAAIDLSPIEISASRTSGLFATQQTIVLEREALQELRTGSDSLATLLSKQVSGMADSSRTITD
YGQTLRGRGMLVLVDGIPLNTNRDSARNLVNVDPATIERIEVMRGSSSIYGAGATGGSCRSRHGRRAASR
>AHV94875.1 ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bordetella holmesii ATCC 51541]
MSEDTLMHDEEGAVDPKLPPDPSRRFWVTTACAVGGVAGVATAVPFVSTFAPSAKARAAGAPVEVDIADLAPGQMRTVEW
RGKPVWVMRRTDEQLKAIKAQDPLVADPESNRPGFTPAYAKNEYRSRKPDLLVCVGICTHLGCSPTPHFETGSAAGMPAS
WQGGFLCPCHGSTFDLAGRVYKNKPAPDNLEVPPYQYLSEGRIIVGVDEDNKA
>AHV94876.1 RNA polymerase sigma factor RpoE [Bordetella holmesii ATCC 51541]
MSERDVDAELVARVQRGDKKAFDLLVLKYQRKILRLLARMIRDPAEIEDVAQEAFIKAYRALPQFRGESAFYTWLYRIAI
NTARNWLASSGRRPSAPNAIETEDGETFNETDNLTDISTPEAMFASREIAETVNAAIEELPEELRTAIVLREIEGMSYED
IAQSMDCPIGTVRSRIFRAREAIANRLRPLLDTDAERRW
>AHV94877.1 enoyl-(Acyl carrier) reductase family protein [Bordetella holmesii ATCC 51541]
MEGRKASVLTLTYLGAERVVSNYNTMGLAKASLEASVRYLATALGPLGIRANGISAGPIKTLAASGIKDFSSILKFVEAN
APLRRNVTIEDVGNVAAFMLSDLAAGVTGEITHVDAGFSTVVPGMEG
>AHV94878.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRF
TRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHN
>AHV94879.1 peptidase S58 family protein [Bordetella holmesii ATCC 51541]
MTTSDKLPELPRIGTLQAGARDAITDVAGIRVGHATRADGDCQTGVTVLWPHGGDPYRDKVPAAASIINGFGKSVGLVQV
QELGVLETPIALTNTFGVGTVANAQIRQAIAANPSIGREWATVNPLVFECNDGYLNNIQTLAITEDDYHQAYAAAAADFA
QGSVGAGRGMSSFSFKGGIGSASRLARLKSGASHMVGALVLSNFGRLPLMTIAGRPFGQRLARRDDHGPEKGSIILILAT
DAALDSRQLGRLSLRAGAGLARTGSVFGHGSGDIALAFSTAYTVPHEAERAMPTQAMLHEAYLDPLFEAAAEACEQAIVS
ALWRAQTVHGRDGHFRRALPEVIPDWRQWLADRDF
>AHV94880.1 amidohydrolase family protein [Bordetella holmesii ATCC 51541]
MIGLRADMDALPMTEDNAFDYKSTKPGLMHGCGHDGHTAILLGAARYLAQSRNFDGTAVLIFQPAEEGRGGAKAMLDDGL
FDTFPCDAIYALHNWPGLPAGTVGVNPGPMMAAADRFEIVINGHGGHGAHPYQTIDPVTVAGHLITALQTIVSRNVNPLD
SAVVSIGSLQAGHPGAMSVIPREAKMVGTVRTFRKSVQEMVETRMRELATAIAGAFGATAEVNYERIYPATLNTPQHATL
VADIATEMVGKEKVVRDLIPSMGSEDFSFMLQAKPGAYFRLGQGGAESGCVLHNSHFDFNDAVIPLGSARFAALAELGMP
LAD
>AHV94881.1 integral membrane, TerC family protein [Bordetella holmesii ATCC 51541]
MDALMTFFLNDFLGTPVWSWLLFLGVVVALLAFDLGVLHKEEREIGVRESLLLSAGYIAAALLFGSWIWWQMGADSGMAY
YTGFLIEKSLSMDNVFVIALIFTYFAIPRIYQHRVLFWGILGVIILRAIMIGLGTALVSQFGWVMYVFGAFLIYTGLKMW
RMVDDTPDIENNAILKFLKRCMRVTDGLRGSAFTVVETDPVTQRNVRFATPLLLALVLVFIGGKIFLHGLVGKVPATFSL
SVTFGLIAAGILYSLWRTRKETPAS
>AHV94882.1 bacterial extracellular solute-binding s, 3 family protein [Bordetella holmesii ATCC 51541]
MKALKFAALGAALLAASSAAHAGTTFDNVKKKGYVQCGVSTGIPGFSIADSKGEWKGIDVDLCRAIAATMFGDATKFKVT
PLNTQQRFTALQSGEIDALTRNTTVTQTRDTTLGLIGVGVNYYDSQGVMVSKDLGVKSAKELGGATICVQPGTTTELNLA
DWFRANKIEFKPVVIDKYDEIVRAFSAGRCDAFTTDKSQLASTRTTLENPEKYIILPEDFSKEPLGPMVRQGDEQWFNVV
RWALNAMLEAEEYGITSKNVDEQLKSSNPNVQRILGVTPGMGKNLGVDDKWAYNVIKQVGNYGESFESTLGKNGPMKLDR
GLNASYKQGGLMYGWPVR
>AHV94883.1 hypothetical protein D560_3691 [Bordetella holmesii ATCC 51541]
MFSYRHAFHAGNHADVLKHAILIHTLDYFNRKDAPYWVIDTHAGAGLYALDSDWASKNAEFADGIGRLWERTDLPPLLAD
YVQQVRTYNPSGTLRHYPGSPWLTMDALRDRDRLRLFEMHPTESGILVNNLEQRDRISLRQTTVYSTDGFEGVKALLPPP
TRRGMVLIDPSYEDKQDYRRTLTAVKEGIKRFATGTYAVWYPLVQRREAGEMARLLERLPVKSWLHATLSVKRPATDGFG
LHGSGMFLVNPPWTLEAALKDAMPYLARELAQDDRAGFTLQYVENPGKFA
>AHV94884.1 cytochrome d ubiquinol oxidase, subunit II [Bordetella holmesii ATCC 51541]
MDTLIPLDLATLRVIWWVLLGALLIGFAVMDGFDLGVAALLPVVAKNDAERRVVINVVGPVWEGNQVWLITAGGAIFAAW
PVLYAASFSGFYLAMLLLLLALILRPVAFKYRSKMETPRWRNNWDYVLCFSGVVAALVFGVAMGNVILGVPQNFDPITLR
PSWEGHFFQLFTPFALLAGVISVLMLVMHGAVLLAWRTEDPISGRARRMGQITALLTAVLFVAAGFWVAKLDGQVITSVI
DPNGPSNPMLKTVAVEQGAWLNNFAKWPLFWIGPALGVAGALLTIALLAMRANVLSFIASSIAIAGIILTVGFALFPFIM
PSSVNSAAGLTIWDASSSHLTLWIMVIAVVIFLPIVTLYTAWVYRVMRGKVTQESVGGTPNSY
>AHV94885.1 NUDIX domain protein [Bordetella holmesii ATCC 51541]
MNTMSIDPQEQHLAETRQSSELVYDGSFLKVRRDMVRLPNDHVVSREYVVHPGAVVVIPLLDDGRVLLERQFRYPVERVM
TEFPAGKLDPGEDPLACAKRELLEETGYTASQWARAGALHLAIAYSTEIIHIYFARGLVAGERRLDQDEFLDVHSETLPA
LLAACQRADVTDAKTLTCMLWLQNVISGDWKLDWQDA
>AHV94886.1 formate dehydrogenase family accessory protein FdhD [Bordetella holmesii ATCC 51541]
MALEFNGISHATMLATPTDLEDFALGFALSEGIVDVASDVRGIDLDARCDGIVVQLEIATACEVRLKQRRRAMAGRTGCG
LCGVETLPEVLRQVTPLPAMPALPLAGLLAAMRALRARQVLHEATGATHAAGWADATGVLHVVREDVGRHNALDKLVGAL
ARAGLPGAQGMVVVSSRASFEMVQKTASAGIGVLAAVSAPTALAQRLAEQTGLTLVGFVRGENATLYSHPGRLV
>AHV94887.1 ribosome biogenesis GTP-binding protein YsxC [Bordetella holmesii ATCC 51541]
MGRSNAGKSSAINVLCNQRRLAFSSKTPGRTRLINMFGLPDPLNPEQPLGFLVDLPGYGYASVAHREKEQWADILGGYLR
DRRSLTGIVLLIDIRRGVTDLDRRLADFIAPTGRPVLALLTKADKLPYGQRIRAVFDVRKQLADIGALNTVPFSVPDRIG
LEDATAQIENWISPKVAP
>AHV94888.1 dicarboxylate symporter family protein [Bordetella holmesii ATCC 51541]
MIEIDQSAGRPVRKQKFYQILYVQVIVAIVIGILLGYFRPDLADAMKPLGDGFIKLVKMIIAPVIFLTVSTGIAAMSDLK
KVGRVAGKAMLYFLVFSTLALILGLVVSHIVQPGAGLHIDPTTLDQKAVADYVTKAHDSTITGFLLNIIPTTIVSPFVTG
DILQVLFVAVLFGVALALVG
>AHV94889.1 septum site-determining protein MinC [Bordetella holmesii ATCC 51541]
MTTEPLALDFKSATLYAIRVVLHSADLEPLQEALARRMADAGSFFENEPVVIDASRLTETVDWPALVQALAAHNLPPIGV
VAEGANLHAARKAGLTPVELSTTAARAPQVVDPAPPNHVSTPVPAAPEASPAAKQQISVALSGDAQAVPTRAARETTAAA
NHTPAAPQSSTALVITKPLRSGQRVYARHTDLVVIGMVSQGAEVIADGNIHVYGPLRGKAMAGARGDTSARIFTTHLDAE
LLAVAGVYRVVEDRLDRNLHNQPALVRLNGDTLHIEALKG
>AHV94890.1 5-formyltetrahydrofolate cyclo-ligase [Bordetella holmesii ATCC 51541]
MQTPNTGENTAVTLRARLRRLRAGVPENQRSRSALLMRGRLFTWLNVARERSAILGRPLQSVAAFWPMAEEPDLRPLLQQ
WADNGITVALPVVQGADRPLEFHRWLPHEPMRAGAYGISEPQSGAIVLPDVVLVPTLGYTAQAERLGYGGGYYDRTLAAL
TAAGHPYTAIGIAWDEGLLPSDYTPAAHDIPLAAVLTPSGWVPEAPLETGGLSAGQGTVFSRTLR
>AHV94891.1 integrase core domain protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERVV
RPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAG
RALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFV
QAHQKEGLLPLGSMSVPY
>AHV94892.1 FAD linked oxidase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MSQNSFAERLTTSLGPDVVLTRSDDIAPWLSDWRGLYKGRAQAVVRPRTTEEVARTLAMCQEAAVPVVPRGGNTGLCGAA
TPDASPANVVLSLDRMNAIRSIDTTANTMVAEAGCILGNLRRAAQQAGRLLPLSLAAEDSSQIGGNVATNAGGVNVVRYG
MMRELVLGLEAVLPTGEIFHGLRTLRKDNTGYDLKQLLIGSEGTLGVITAVALRLFPRTDVRTVVLAAVESPAQALSLYE
LLFQACGARLQAYEFFTGDCLDLVLRHAEGVQEPFAQRYPGYVLMELADTEDEAALTAMLEKVIGQALEDGLCLDAAVSA
SMAQLQALWKLREEISEAQRADGPHLKHDVSLPIERIPEFMQTAQQRVRELDPGIRLYIFGHFGDGNLHYNLSRPSGAPK
EWAAQDGGRVTDVVLDEVHRYGGSISAEHGIGQLKREHFLHTKDPLELRLMSGIKRLLDPAGIMNPGKLL
>AHV94893.1 sulfite exporter TauE/SafE family protein [Bordetella holmesii ATCC 51541]
MLFLLAVALATYAQTMTGFAFGLVLLGLSSLAGLAPLPDMSNTVSILTLINALVAIGRNRPQVNWALLRPALISSLVGVA
LGVAALDLIHGRLSVILQWLLGLTILVCAFMLVMQARQLAQISSRRVFLSFGLVSGLLGGLFSSAGPPMVYQLYRQPLPL
AVIHNSLLVLFAANAVVRLSLVTWQGSIHVNTLWMSLEALPVVVILTMLVRRFASAHAIRSVKRMVFVLLIAAGLGLFVP
ASRTLLQMIL
>AHV94894.1 squalene synthase HpnC [Bordetella holmesii ATCC 51541]
MAVDHYENFPVASILLPRPLRQAVRDIYRYARAADDIADEGDADDSQRLSSLERFRHELHRIGSGPNQPGPPDLASIFDP
LASTIRRHQLPITPFFDLLSAFEQDVGTRRYADFASLRDYCSRSADPVGRLMLHLYGAASDENLRDADAICTGLQLTNFW
QDVRVDWRKGRVYLPQEDLQAHGVSEDDLAACRLTPAWSALMAFEIERTRALLHSGAALPRRLPGRIGFELKLVVQGGLR
ILQRIEQANYDVFMNRPQLGARDWALMAWRALI
>AHV94895.1 lysine--tRNA ligase [Bordetella holmesii ATCC 51541]
MTDHSPTAQDENRLIAERRAKLAKLREAGVAYPNDFVPDAQAARLHDTYDDQDAAALLEATVHVKVAGRMMLKRVMGKAS
FATLQDGSGRIQIYLDRGTLGEDVYAGFKQWDIGDIIAIEGSVFKTNKGELSVHASSARLLSKSLRPLPDKFHGLSDQEM
RYRQRYVDLIMTDTTRRTFEARSKAVGGIRQAMLEAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMYMRIAPELYLK
RLIVGGFDRVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTESLIRQAAIAAAGSAVLTYQGRELDLSKPFD
RLTICEAILKYAPHYTQAELDDTDFVRAELKKFGADVDKAPLARAGLGALQLALFEETAESQLWNPTYIIDYPVEVSPLA
RASDTREGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDR
LVMLLTDSPSIRDVILFPHLRRED
>AHV94896.1 type IV leader peptidase family protein [Bordetella holmesii ATCC 51541]
MSLPAVYLLAALAGLALGGCATVVSHYLPLHLRRAWRGRSEQLSLPLRARRRLWPVIGWYLASRAATRQTAAWRTPWPEL
LLAALFMACIWRFGPGWLAASAMGYCLALVLMAWVDSRSYILPDILTLPLLWAGLLVNLDGVLTPLPHAVLGAVVGYGVL
WIFYHVFKWFTGREGMGFGDFKLTAALGAWLGVGELAPLLLLAAVAGLVVGVAGRLRGGPDRPQPFAPFLALAGIMALMW
PPHWNGFF
>AHV94897.1 hypothetical protein D560_0561 [Bordetella holmesii ATCC 51541]
MFPLVPGLVGLYLVWRYVSRLPLGLPIRCLLSLLLMGLIEHHWLVSRFFGTIASPEIPRLAIMGLGTVFGALMLLAAALL
IKDVIGLGQWLLTRQAGIWRRPPGHGPTPWHWFAWCSPA
>AHV94898.1 bacterial regulatory helix-turn-helix, lysR family protein [Bordetella holmesii ATCC 51541]
MATYFDLTDLQLMVHIGDWHSLTRAAEKTHLSLPAASTRVKNLEEHLGTQLLYRTSQGVTLTPSGEALTRHARTVMQQIE
QLRGDMQEFARGVKGHVRVLANTTASTEFMPAVLARYLAVHPDVNVELRERLSYLIVRAVADGSADIGVVAGCAPDPKLQ
FIPYRNDRLVLVTGSRHPLAVEDAVPFADTLGFDYVGLSEWSAIHPFLVQAAAGLGRTFRFRVEVGNFEAACRMIESGVG
IGVVPESVALRYARVLDIAVVPLTDTWSLRQLHICVRDLEALPVFARELVQTMIDDVPASKPLV
>AHV94899.1 hypothetical protein D560_3787 [Bordetella holmesii ATCC 51541]
MDIEINEELRVYIDPLTSEEYSALERSILAEGCRDALVLWGNVLVDGHNRYEICCRHGVEFRTLQNERFQSMDDVRLWMI
DNHLGRRSVSDYQRGVLALRKKQILQAREPSDSGEAAPEAVVPSRQELAREARVSSNTLAQIERIEQQAVPQLVKAVRAG
EISINAAAAVASLPPPRQQQAAEGGKQNLREVARQARLELQAARYQAKLRKDAQAQPAGQAEAGTQVVPPWESPAIEDYP
AEVERLNDIIKRLTEERDALKKKVMHLTVALAEARREPG
>AHV94900.1 orn/Lys/Arg decarboxylase, N-terminal domain protein [Bordetella holmesii ATCC 51541]
MKFRFPIFIIDEDYRSENASGLGVRALASAIEAEGVEVIGVTSYCDLSSFAQQQSRASAFILSIDDEEFDVDSPEDVASA
IKNLRTFIGELRFRNADIPIYLYGETRTSEHIPNDILRELHGFIHMFEDTPEFVARHIIREARSYVDSLPPPFFRELVKY
AQDGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAESEVNAARIFHADHCFFVTNG
TSTSNKIVWHANVAAGDVVVVDRNCHKSILHAITMTGAIPVFLRPTRNHLGIIGPIPLAEFDPENIRKKIEANPFAREAV
NKNPRILTLTQSTYDGVIYNVEMIKEKLGSYVDTLHFDEAWLPHAAFHECYQDMHAIGQDRPRNQDAMVFATHSTHKLLA
GISQASQIIVQESESRKLDRNVFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGARRWSKKASARRWTFAVPCARSNPST
ARTIGGSRSGARIAWYPKASAIATSGFWKPTITGMALAIWPKTSTCSIRSRPPSSRRGWTCQAASARPVYRPRWCPST
>AHV94901.1 hypothetical protein D560_0504 [Bordetella holmesii ATCC 51541]
MKKSVAITSGVIIVGVGVWLGATWYTGKRIEEQTQQYLVQANDKLAAAVPGVGIRIEQDHYARGFFSSHAQYTITFTTEK
TEEDNKPLIVAVTSEIEHGPFPAGALARGKWLPQLAFIHSELANNEVVKPFFDMAQGKPPLWSDSVLSYNGQADGTGGIA
ALSFKDDKGTFRFSGATVHSLYDNRDQSIKGRIESDDLLLDVIEDGEPLHAHVSGMGMDIDSRMGKFGLSIGTSALLIKS
LEIGSAGLDSPVAINDLGYALDVSEDDAYVAGKAVYKIGKISVAKEDFGGGELALSVAHLDGPTMKIFSDTYKQMARGLM
AGRGTDEGLRDEQIGSLIENGGKLLAAKPSLAVDQFVWRNAAGESRFSLKLDLTKPQSDAGTGEDFIQSGAEFLQKAIKR
IDASLQISKPMAVALGAQILQLRGADAAEARNEAEENIQAVAGMAEMMNLGRNDGDNIVSTFSYADGRGELNGKEVPVKE
WLAELANAGGAAMDEDESESPIVDELDAETVADIIDAAGYEYGYDEGKKVFTVLAEELSPTDITVALLCEPDCDKLRMTA
VYGDQTPPTAAVIKHWNAEYAEFGQASLNKQGKAVLQYDVDVSEGLSLDMIQMFLEGFLAVADDFPEPPDEH
>AHV94902.1 D-alanine--D-alanine ligase family protein [Bordetella holmesii ATCC 51541]
MTHDFGKVGVLYGGRSAEREVSLMSGAGVHDALRSAGVDAHLFDTGLQGLAELQAAGFDRVFIALHGRYGEDGAIQGALE
LLNIPYTGSGVAASAVAMDKILTKRIWLQHGLPTPAFEEIDGQTDLRQVPDRLGLPLILKPPHEGSTVGITKVAGYSDIK
QAYASASHFDEVVLAEQFVRGRELTVAVLGTGRGARALPVIEIVAPDGNYDYQNKYFTDDTKYFCPADLPEGVAADVERI
AVLAYRVLGCEGWGRADFILDDQNRPWLLELNTSPGMTSHSLVPMAARAVGLNYADLCVAILAEASCKLRAAARTEQ
>AHV94903.1 cytochrome c family protein [Bordetella holmesii ATCC 51541]
MKRLLLTLALALASTGAHANDNAQRIERGRTLAIAADCMACHTRAPSGKPFAGGYPIQSPLGTIYASNITPSKSAGIGDY
SLEDFTRAVRQGIRRDGSRLYPAMPYTSYTLITDEDIGDLYAYFMNGVQAVDDKPPSTDLPFPFGIRASMLVWNALFFDD
ERFTPDPTKDAEINRGAYLARALTHCSSCHTPRNALMAEDVKRPLGGGMVGPWHAPNISSDPAAGIGGWSNEEIVQYLRT
GRVAGKGQAAGSMAEAVEHSFQHMSETDLTAIAAWLKQTPPVPAASAAPASYARGAAASAEAQLRGTHPQTANHTLKTGA
ALYSAYCASCHQASGTGSTGQAYPALFHNTATGADNANNLVAAILYGVERNAAGQHVLMPRFDQKSYVQPLTNNEIALIA
NYVLANYGNPVLTVTAEDVQVARSGGAPPLLARMQPYILPALIVAAVLVLLGVFVLVRRRRRG
>AHV94904.1 hypothetical protein D560_0889 [Bordetella holmesii ATCC 51541]
MSGGVGLGLAVSRGWRAAIRRHPWRALVLLLPLASLLAYGVAFAHSVWRYQQVVARQEAARALVLEHAQTIDGIAMPAGS
RLQLQRAGHPESFVEAEFAQPVMVQGIAARRLARRVSTRYDAQSHAEIGSDVLSMSVFGDGPQRVHGWSCDAALPIEFEF
KGGRAVFEQCTLAAGAAHPLAIAGARLRASAGTAYTDGHIDPDRWIISLKEGQSLRLAGMWLAEASLRLHDDGTFFALSA
GTLICPHVMGPMRYPPGTQVQTIARGWQGRRPWLFTPAAHTHASYAGHADVEASSSVVQSQDGEVLSVAPSRELGVRDWM
KLGPHAALPACPD
>AHV94905.1 peptidase M20/M25/M40 family protein [Bordetella holmesii ATCC 51541]
MTTLPTTQELIAEIQTWVQCESPSHYVEGITAMAHLAAERPGILIIGHIDTVHPVGTLTENPCRIEDDRLYGPGSYDMKA
GIVLALAGLRGLTEPGAARLPIDFLMVPDEETGSHASREHIEHLAKQAKYGLMCEPARPNGGKCVTARKGTGMLRLGVTG
RPAHAGMSHEKGGSAIREMAHQILALENMTDYARGVTISVGTIAGGTVTNTVPAQCRCVVDFRVPDMGAAKDVLSRMRQL
CAVGPDVELDIDVELNRPPMVKTAESAALLAQAQGYANQAGFPLEDAPMTGGGSDANFTSALGVPTLDGLGADGDGAHTL
HEYIQISTLDMRAKFWHLLLRDLD
>AHV94906.1 cytochrome c family protein [Bordetella holmesii ATCC 51541]
MVLTSGDVIHSWMVPDFGVKQDAIPGFLRDTWFRADKVGAYRGQCAELCGKDHAFMPIVVEVKSQEDYDAWGAEQKKLMA
AQADDPNKTWTKEELMARGEKAYTGSCVACHQANGKGIPGSFLALDGDPVVLGPKAAQIATVLKGRPGTAMAAFGGQLND
VDIAAAITYTRNAWSNAGKGEDPAVQPKDVAAAR
>AHV94907.1 hypothetical protein D560_0684 [Bordetella holmesii ATCC 51541]
MLAAQLCGLGTCIGFLEHADDLLFRKSFLHCHSFGNGLYIDFVLITGSRSTQFLWFIAE
>AHV94908.1 putative peptidase inhibitor domain protein [Bordetella holmesii ATCC 51541]
MLPAGQNGGLPVATVNMPEVDVQFLRVDPQRVPEFFDTVLGVGRGRGAAVDDQDGDQEEEDGWRYADNRSMKGSVSNWDL
DRLNTLTSSVYQGRFLTDDKPNRRHVTFLPVEHIQELQDPGIYIAVMSQPGRFRYEYQTTYFYVSDIGLHARRYPDRSEA
YAVSLKTGQPLPEVRVELVDGPAKRWPRPARTPRAMCGLMVRTPMPESCARRAARK
>AHV94909.1 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [Bordetella holmesii ATCC 51541]
MHILENYVAGQWRRGEGQPATLRDPVRGTVLAGASSAGLDLPAAFAWAREQGGAGLRALSYAQRAALLSRVGEVLSANRE
KYFDIALANSGTVQADSAIDIDGAIYTVGYYAKQGSRLTEDAWRMDGAAEALARDDAYAVRHVWTAARGLALFINAFNFP
SWGLWEKAAPALLSGVPIVIKPATSTAWLTHEMVADVVKAAALPEGAISLICGGSAGLLNALRPLDLLSFTGSADTAAQL
RAHPALMQGGVRLNAETDSVNSAILGPDAAVGSPAFDALVREVVREMRAKSGQKCTAIRRIMVPAEHYDAVAQAVSAQLA
RITVGDPRNPDVKMGSLVSRVQFDHVQSGLSTLRSATHVLFDGATQPLIDADPAIAACMAPTLLGSREPQALLHRTEVFG
PVATLMPYRDTAQAWAMARQGEGSLVASLYSDDTTFLAQGAQALAESHGRVHLVTPEAAKAHTGHGNVMPQSLHGGPGRA
GGGQELGGLRAMEFYHRRSAVQGAPARLEALPSARVQEFAS
>AHV94910.1 putative isrso14-transposase orfa protein [Bordetella holmesii ATCC 51541]
MPQARNLRGNVLQLEGEVRWHDGVGRSEAQGAGAGEQQAQEAVGRVDAGQGGASGSAKPKVVSPQAKREAVRTLMTERSM
GVTRACVSTPVEN
>AHV94911.1 succinate-semialdehyde dehydrogenase [NADP+] GabD [Bordetella holmesii ATCC 51541]
MTKTLSRPDLLRDACFIDGKWVAATGASIPVDNPATGKTIVSVPKLGRKEAEAAIASAEKALPGWAAKTGKERGAILLKW
ANLMMQHQQDLATIMTSEQGKPLPEAAGEIAYAASFLEWFGEEAKRIDGDVLQSPKAGQRIMVLKQPIGVTAAITPWNFP
AAMITRKVGPALAAGCPMVVKPAQQTPLTALALAVLAEEAGVPAGVFHVITGSSREIGAALCESDVVRKLSFTGSTEVGR
TLMEQCAPTIKKLSLELGGNAPFIVFDDADLDRAVDGILASKYRNAGQTCVCANRIYIQSGVYEEVTKRLIAKVQAMKVG
DGFDKGVTQGPLIDDAAVTKVKEHIEDAVGKGAKVVAGGKAHALGGNFFEPTVVRDVTQSMLFAAEETFGPVAPLFKFET
EEEVIKYSNDTIFGLAAYFFTRDYARIWRVSESLEYGIVGINTGLISNEVGPFGGVKQSGLGREGSKYGIEDYLELKYLC
VDLGA
>AHV94912.1 acyl-CoA dehydrogenase, C-terminal domain protein [Bordetella holmesii ATCC 51541]
MGVTEPTTGTDTTRIKTTAVKRGDRYVINGQKVWISRVQHSDLMILLARTTPLEQVTRKSEGMSIFLVDLHHAVKHGMQV
RPIPNMVNHETNELFFDNLEIPAENLIGEEGKGFKYILDGLNAERTLIAAECIGDGYWFVDKVTAYAKERVVFGRPIGQN
QGVQFPIARAHINVEAASLMRFEAARRFDAHQPCGAQANMAKLLAADASWEAANACLQFHGGFGFANEYDVERKFREIRL
YQVAPISTNLILSYVAEHVLGLPRSF
>AHV94913.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein [Bordetella holmesii ATCC 51541]
MSAPTSLPRIAIIGFGEVGPIFAQALHERGCEVAAYDLKLQDPASADVIRAKAARSGARVAGSLSDCLNQADWIFSAVTA
SQAGAVARDAAAFMQAGQIFIDLNSVSPRVKQENCARIQQAGGEYIESAVMAPVPPQGVQVPMLLGGRRAREMAESLNAL
GMRTQAVADDVGLASAIKLCRSIMIKGHEALCLQSMQAALHFGVDERVLASLAATFPGVGWDKGYEAYLIGRVAEHGQRR
SEEMREAAAMLDELGLDSGLASAIADVQQDFAQRGRGWLTDLDARGGLPGWRDLLA
>AHV94914.1 asnC family protein [Bordetella holmesii ATCC 51541]
MADEVGLSPSACLRRVARLKETGVIQRVVALLDTKHTGRALTAIVTIEFSRHGSEYRRKLMQALLAEPAVTQCYLVTGRI
SCVIIVHMNNMDDYLAFADRHFDQDENVEAFYTHVVMQTVKNEPGPPLLDLV
>AHV94915.1 putative membrane protein [Bordetella holmesii ATCC 51541]
MDIDRTRSERRWPLVDLLVIAAVCVNAGQVLIRAYSAAPAPVAQAGPWYGMAAAYGGLCWVSSRVAGRWQWLARALFLLV
GTACLMFMVQGEPLPAGPSMHWYDWFVLGACSALCGGLGRGSGAG
>AHV94916.1 FAD binding domain protein [Bordetella holmesii ATCC 51541]
MKIVCIGGGPVGLYFGLLMKLRAPDNDVTVIERNRPYDTFGWGVVFSDATMENLRQADPVSARTISDVFNHWDDIDIHFK
GQMVRSGGHGFIGIGRKHLLNIIQARCEEIGVKLVFETLVQDDQEIARQYDADLIIASDGINSVVRSCYASTFEPDIDQR
RYRFVWLGTRKVFDAFTFAFVQTEHGWFQAHAYRFEDGLSTFIVETPEETWQAAGIEKMSQEEGIAYCENLFAPWLDGNP
LISNASHLRGSAIWIRFPRVICNTWVHWNTLETARGVRDIPVVLMGDAAHTAHFSIGSGTMLALEDAIELARCMDAAPGD
LPAVLEQYAAVRSVEVLKIQNAARNSTEWFENVARYADLPAEQFAYSLLTRSQRISHENLRMRDADWLQGYERWLAGQDA
ATPHDGTRPPLPMLTPFRARSVTLPNRIVVSPMAMYSCQDGVPGDFHLVHLGARAMGGAGLVMVEMTCPSPQARITPGCP
GLWNDTQTRAFARIVDFVHTNSPARIGIQLGHAGRKGSTQLGWQRMDHPLPEGNWPLLSASPLPYLPGVSQVPREMTRAD
MDAVRDEFVAAVGRAAEAGFDWLELHCAHGYLLSSFISPLTNARADEYGGSLDNRLRYPLEVFRAVRQRWPADRPMSVRI
SAHDWVEGGVDADAAVQIARLFKLAGADMIDCSSGQVSPEQKPVYGRMYQTPFADRVRNEAGIPTIAVGAISEADHANGI
IASGRADLCAVGRPHLADAAWTLHEAAKVGYRDVAWPRQYVAGKRQLETHFERAASLAQRDM
>AHV94917.1 pseudouridine synthase, RluA family protein [Bordetella holmesii ATCC 51541]
MSDTAASADPLSDDEPLAIFIPPDTPADRLDKVLAGLMPGHSRSRLQGWIEAGHVLVNGTVAKVRQPVGPGDQLTVWEQP
APESLAFSPEPVDFEVVDVSPEWIVVNKPAGLVTHPGADNWNGTLLNGLLYRYPELSRVARAGIVHRLDKDTSGLMVVAR
TELAQTHLVRQLQARTMGREYICLAHGWLRAGGTVDRPIGRDARIPVRMSVERPIAPKPAVTHFRPLRQGTSGQERVTQI
VCRLETGRTHQIRVHLASLGHPLLADTLYGGRPLAGAARQMLHARALHFDDPAGRGEMAFEADVPPDMQDVQGALEWDT
>AHV94918.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Bordetella holmesii ATCC 51541]
MRFERALHQLRLGRSIILMDDFDRENEADLIVAADKLTVPVMAQLIRDGSGIVCLCLPGQTLDKLELAPMVQRNQSRYAT
AFTVSIEAASGVSTGVSAVDRVTTIRAAIAPGAQAGDVVSPGHVFPLRAQAGGVLARRGHTEGSVDLARLAGLPPAGVLC
ELMNADGTMMRGAALERYAAAHGLVALTIAELADHLRATQPEAVLAA
>AHV94919.1 hypothetical protein D560_1537 [Bordetella holmesii ATCC 51541]
MTLLQVGGQSVWMIRFRPSQWWRWGMPSLRDVGTTLRESAIHGNESV
>AHV94920.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MSSIPPAAVSAMHTLYSDNHGWLLGWLRRRVGDPFDAADLMQDTFVRVLKSHTGRCGEASAGPVAEIREPRAYLATIAKS
LMIDFFRRQALERTYLEVLAALPPQEVPSLETQAVLRSALIEIDAMLDGLGLKVKQAFLMAQCEDLPYAEIARRLGVSRR
SVDNYLARAMAHCCLLLP
>AHV94921.1 tripartite tricarboxylate transporter receptor family protein [Bordetella holmesii ATCC 51541]
MQQNQFPASPMRRRLLQGAGAGLACALTASVRAADAYPSRPVSIIVPYAPGGQGDVFARLLAERLGSELKQSFIVENRPG
ASGALGSRLVLRAPADGYTLLLGQTGEIAVNPYAMKSLGYDPLREFAPVILVGDSPLVLAVPDNSPYADLGALIAAARAK
PDTVAYASSGTATPGHLAAAALALGTQTQMIHAPYKGAGQAMADLLGGHVGFFFSSASAAMPHIASGRLRALAVSARQRL
AILPAVPTISETVVPDFQFSLWGGVFAPAHTPAAVIEQLNSKLNAILMEPAIKAKLEGDGAAVRPNTVQEFTAFVRSEAD
KYQNLVKSTGVQVD
>AHV94922.1 H+ antiporter-2 family protein [Bordetella holmesii ATCC 51541]
MSEQARKAPSDGPYPPLEGATRIIGSVALSTAVFMNVLDTSIANVSIPTISGDLGVSSSQGTWVITSFAVANAITVPLTG
WLTQRFGQVRLFVTSTLLFVLASWLCGFSPTLEALIAFRVLQGLVAGPMIPLSQALMLGAFPREKAGMALAVWSMTTLVA
PVAGPLLGGWISDNYTWPWIFYSNVPVGLLAAWISWRIFRDRESLTRKLPIDKVGLFLLVVWVGCLQIMLDKGKELDWFA
SPTIIALAAIAFAAFVFFLIWELTDAHPVVDLRLFKERNFTVGALTLATAYGVFFGNVVLLPLWLQSNMGYTAIYAGMVT
APVGLLAILLTPIVGKLLATRDPRQIVTVAFMIFALVCFMRSGFNTQTDMRTLMIPTIIQGAAMAMFFVPLTSITLSGLD
PSRIPAASGLSNFARLTAGAFGTSIATTLWDNRATLHHAQMTESAKSGQQAFDHIMGTLQNALGLDHQQSLSVVDGMVNN
QAYTMAAVDIFYASAIIFVLLIGTVWFARPTSSRGKGKGKDDGAAEAAAGAH
>AHV94923.1 phosphonate ABC transporter, ATP-binding protein [Bordetella holmesii ATCC 51541]
MTTSLRISGLVKEYRAGQPVLKGIDLHVAGQGLTAIIGPSGTGKSTLLRCVNRLIEPTQGQIVLQADGATVDLARVRGQA
LRHARRRIGMVFQEYNLVERLTVMENLLTGRLGYTSALKAWLRRFEQEDIDRAFGLLETVGLAGFADQRADALSGGQRQR
VGIARALMQRPQLLLADEPTSSLDPKTSVEIMELLTEQGSASGIPVLVNIHDVELARRYASRIVGMSGGQVVYDGDGQGL
DTATLKAIYGGESWLQ
>AHV94924.1 phenylalanine--tRNA ligase, beta subunit [Bordetella holmesii ATCC 51541]
MQFSESWLRTLVNPAIATEELAHQLTMAGLEVEETHSAAPAFSGVVVARIAEIAPHPDADKLRVCQVDDGSGALLQIVCG
APNAAAGLVVPLARVGAELPGGMKIGVAKMRGVASSGMLCSARELGLSQDHGGLLELSADLKPGTDIRQALDLDDTLFVL
KLTPNRADCLSILGVAREVAALTGAPLAAPQAAAVAVTIDDRLAVNVEAPDLCGRFAGRVIRGVNARAATPEWMKTRLER
AGQRSVSALVDISNYVMLEVGRPSHVFDLDKIQGDLTVRWAKKGERLELLSGTHVELDEKVGVITAGPIVESMAGIMGGE
ATAVTLDTRNIYLEAAFWWPGAIAGRARRYKFSSEASHRFERGVDYGSIPEHIELITALILDICGGQAGPVDDQIINLPK
REPVRMRLARCHRVLGVPVSHAEVAQIFGRLGLAFAADGDDFVVTPPSYRFDIEIEEDLIEEVARIYGFERIPSVPPVAR
AKMHAQPEVRHGQHAMRRAVAARDYQEVVNYSFVQADWERDYAGNDNPVRLLNPIASHLSVMRSSLIAGLVAIVRHNANR
KQSRVRLFELGRVFQRDAQLADGPLEVAGVRQPLKLAGVAWGPASEEQWGEPVRQVDFFDVKMDVETLFGKRASQLRFVA
ERHPAMHPGVPPVSNWPGSLSAGWVSCILSGRARPIWLTRPWFSSWTSRPWPRASCRWCASSRASLWCSAIWRCGSTNPC
NCRRCWIPLPH
>AHV94925.1 RNA chaperone Hfq [Bordetella holmesii ATCC 51541]
MSNKGQTLQDPFLNTLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAISTVVPARAVNFQVEVPAE
>AHV94926.1 hypothetical protein D560_3774 [Bordetella holmesii ATCC 51541]
MNVLAHPTVQGVLTLQTSDLAIAASLVALSAIISLVMRLRMERSIVWAAIRAVVQLLLVGHILRVVFAYASVWLTLGSSW
S
>AHV94927.1 acrB/AcrD/AcrF family protein [Bordetella holmesii ATCC 51541]
MIVVGLAVAAASGVLFKVVKSELTPIEDRGVIFGIVSSPEGATLGYTLENMLAIEKFYESIPETSVSQTTVGFPTVTDGT
AILRLKPWEDRARRQQEITRELQPKFSALPGVRAFPTNPPSLGQSSRSKPVEFIIMSQAPYPELAKLVGVFLNALRDYPG
LQNLDTDLRLNTPELRVHVDRDKMSDVGASVDVVGRTLESMLGGRQVTRYKDEGEQYDVIVQVTPRDRATPTDISGIYVR
ARDGSMVQLDNLLAVREGVSPQSLNHFNRLRAVKVDASVAPGYALG
>AHV94928.1 hypothetical protein D560_1067 [Bordetella holmesii ATCC 51541]
MALDIQAVLQAQNAEFVFAQLAIEKAARLASELVHALLHELLVDGVIHVHDGNPECAGAPASKGASASTGAIAVICTQP
>AHV94929.1 molybdate ABC transporter, periplasmic molybdate-binding protein [Bordetella holmesii ATCC 51541]
MIFSALAAVFVAASAQAADLTVSAASSLTNAFKELGQAYEAKHPGNKVAMNFAASDVLLRQIEQGAPTDVFASADQTAMD
RAVQSKAVRPDTRVNFAANALVLIVPATGDSAVKSTADLKADKVKRVAYGNPASVPVGRYTQAALEKQGLWDAVSAKGVP
AQNVRQSLDYVARGEVDAGFVFATDAAVMPDKVKVVEVVPTPQSITYPIALTTRDANTAAAQSFIDYARSPEGQAILARY
GFKKP
>AHV94930.1 30S ribosomal protein S11 [Bordetella holmesii ATCC 51541]
MAKASTSGASRVRKKVKKNVSDGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTPFAAQVAAETAGRVAME
YGIKTLEVRIKGPGPGRESSVRALNALGIKISSIADITPIPHNGCRPPKRRRI
>AHV94931.1 excinuclease ABC subunit C [Bordetella holmesii ATCC 51541]
MPDDFNLKSFLADLPHLPGVYRHLDAAGEVLYVGKARDLKRRVSSYFQKNLASPRIAQMVGKVARVEVTVTRSEAEALIL
ENNLIKSLHPRYNILFRDDKSYPYLLITGHAWPRIAYYRGATNKRGQYFGPYPNAWAVRETIQILQKVFRLRTCEDTVFA
NRSRPCLLHQIGRCSAPCVQAIEAADYARDVQRAARFLNGEAREVMDEIETRMLQASSELRFEEAAALRDQMGSLSKVLH
QQTMENVGGEDTDVIAVAAAGGKVCVNLAMVRGGRHLGDKPFFPTHADGEAGPQVVEAFVAQHYADRPLPPVLVCSHALP
DPDLIGLLAEQAGTRCRLLTRPQGVRRSWLEQAQKNAELALARALTESGARAARTLMLAETLNMDTDEAALDALRIECFD
ISHTAGEATQGSCVVFLHHDMQPSLYRRYNIVGITPGDDYAAMRQVLTRRFGKVADGEAPCPVWC
>AHV94932.1 bacterial extracellular solute-binding family protein [Bordetella holmesii ATCC 51541]
MKKLQFTGVARAMTASRRAWVFGLAMAAAGVAHADVTQIQVWHTLVGANKAEFEKLAKQYNKEQNEVEVKLRDFPTQAAL
QQETAAALKAKKGPNLIQLADNHSPEVVAEHKAILPMYQLLAKYPVKDLNWFLPNTSSFTRDGKGRLLAFPWMAEVPVMF
FNTALYKKAGLNPDQPARTWTALQGELLKLRDVADIDCPYASSNQVLVHLENLAPMNNQLYASNSNGLAAAKQALPCSST
RCICATSR
>AHV94933.1 hypothetical protein D560_2777 [Bordetella holmesii ATCC 51541]
MAGRGEEAAGEVFEDAKLRARGIARQMEGKVQGAMGTAADSIDDVADTVQSLVRRHPMGSLLAVGVAAYLLGRVAGAIRR
RH
>AHV94934.1 phenylacetic acid catabolic family protein [Bordetella holmesii ATCC 51541]
MYAQLVETGVKQLRRTDELSGPERDFQRRVDEGVRIEAKDWIPDAYRKTLVRQISQHAHSEIVGMLPEGNWISRAPSLKR
KAILLAKVQDEAGHGLYLYSAAETLGVSRDELIDDLHSGKAKYSSIFNYPTLSWADIGMIGWLVDGSAIINQIPLCRCSY
GPYARAMVRVCKEESFHQRQGYDLLIQMCLHGTPEQKAMCQDSLNRWWWPALMMFGPSDADSPNSAQSMQWKIKLFTNDE
LRQKMVDQTVPQAEYLGLTVPDPDLKWNAERGHYDFGEIDWDEFYAVIKGNGPCNRERLAARVKAHEDGAWVRDGLAAYA
EKQARRKAA
>AHV94935.1 receptor ligand binding region family protein [Bordetella holmesii ATCC 51541]
MTLRTPIKLLAAGIAAACLTSVAQAADIKFGFAAPLTGPQSHYGEDMQNGLTLALEEANQKGVKVDGKPVKFVLVSRDDQ
ADARVAVQVAQQLVDEDVNGILGHFNSGTTIPASRVYHDAGLPQISMATSPEYTKQGYETTFRMMTSDTQQGGAVGKFMV
DKLHAKKVALIDDRTAYGQGLADEVEKAVKAAGGQIVRREYTTDKANDFTSILTNIKGVAPDAIFYGGLDAQSGPMKRQM
QTLGLKAPLVSGEMTRSDTFIKLAGDAAEGTYASLAGVPLDKMSAGKDFAQRYQTRFKKAPGVYAPYAYDGAWNMITAIE
HAGSAKPEKYLPELAKLNRKGATSEHIAYDANGDLKEISVTLYQVKNGKWEMVETMVSQAQ
>AHV94936.1 mechanosensitive ion channel family protein [Bordetella holmesii ATCC 51541]
MPWLLALLLALMLTCLSAFWLPAAHAQLAPEPAAQSATTTPEALTPAALADLLDNPATREALVKTLRQQSAGQAPATATQ
KAPLAAAEPGLQERMTDNLQRFLTGLAADTGQGVEDLRKLAYGQSLRMDGQTATHVFLPLGLTALATIIAFILLRLIALR
IYTRIDHWVADCAPETTARPLPLRVLYQRAGAILGAVAIDAGIVLLAAAAGGAAGLWGTPATGKLDALAILFLRAFVSVE
LVKVVIRTIFAVRHPHLRLLPMADEHARYWNAWLIRVVAIAGYGTLLVAPVIAIALSPALGHLASLIIMLAVYIYAVRVI
WHNRQAVRSHLEHRAAHAATFMGTRLRFLSRIWHILGIGYFTILLVLSQIDPTNALPFMARATLQTLLSIGAGSLIILML
NTVLAKRIHLPDDLRRRLPLLETRVNAYVPATLKFIGWIVRIVILLLILDAWHAFDLSSWLASDRGAAAIRMVINIAIVL
LIATLAWTVIASVIEHRLSQSEGCGMPSARERTLLALFRNAALIVIVTMTLMVLLSQIGIDVGPLIAGAGVVGLAIGFGA
QKLVQDIITGVFIQLENGMNENDVVEVAGVFGTVEKMTIRSVGIRTLDGGYHLVPFSSVDVVANHMRDFSYHLGEYTIAH
RESVDDAIEHMRAAFAELLTDSVLGPEIIEDMTVAGVTAVNDKGVTIRILIKTTPGMQWAVQRGYNRLLKKHFDAANIEL
PYPHTVVYFGQDKRGYAPATNVVMQPERLDQGENAAAPGQTRRALEPTDRADDTSEVLGNELELRDEPPRQG
>AHV94937.1 osmC-like family protein [Bordetella holmesii ATCC 51541]
MDPGVPLGVTQVRVKAHAKSPDASHEQLQALIAAVEQACTLHETLVRPVDVITIFAD
>AHV94938.1 RNA polymerase sigma factor, sigma-70 family protein [Bordetella holmesii ATCC 51541]
MLPTTLETLYIDHHSWLRGWLHRRLGNREQAADLAHDTFIRLLCSERVPAVLDEPRAFLTTVAQRLLSNHWRREKLERAY
LDALALAPQPLARSPEERALLLETLFELDRQLDGLPTLVRRAFLLSQLEGQTHAQVAQTLGLSVPTVKRHIVRALTRCCF
ADLGGSR
>AHV94939.1 sulfur transport family protein [Bordetella holmesii ATCC 51541]
MLSPWLYGIFADVPASRFISSTPALILAGLLVGFGTRLGSGCTTGHGVCGLASGAPRSVASVLIFTVTAMAVVAAVRHLS
GS
>AHV94940.1 pyridine nucleotide-disulfide oxidoreductase family protein [Bordetella holmesii ATCC 51541]
MAFDFDLYVIGAGSGGVRAARFAAGFGARVAVAESRYLGGTCVNVGCVPKKLLVYGAHFSEEFEQASGFGWTPGHPGFDW
HTLIQNKNREIERLNGIYRNLLVNSGVALHEGHARIVDPHTVEINGQRHTAERILVATGGWPFVPDIPGKEHAITSNEAF
FLKKLPRRVLVVGGGYIAVEFASIFNGLGADTTLAYRRELFLRGFDQSVREHLRDELQKKSMTLRFNSDVARIDKLPDGT
LAATFVDGSVLETDSVFYATGRRAMLDNLGLENTSVSLNKQGYIEVNDLFETAEPSILALGDVIGRVPLTPVALAEGMAI
ARRLFRPAEYRPVDYDLIPTAVFSLPNIGTVGLTTEEAVKRGHRVKRFESRFRPMKLTLTDSQERTLMKLVVDADTDRVL
GCHMVGPDAGEIMQGLAVALKAGATKRVFDETIGIHPTAAEEFVTMRTPVAD
>AHV94941.1 hypothetical protein D560_3439 [Bordetella holmesii ATCC 51541]
MTLFSIRPRHVSFTLLLASASLACAVHAADAADDLYARVDRITWGATPETLAQARKVGYEAWLQSQLEPPAKPVLPADVA
EHIAALPISTVSAQQASVELRERIAQNKQTDDPDQQVQARREANRAMRDRGRQARERAVWLALYSPNQLQEHMTWFWMNH
FNVWLNKGYVGTTLDDYEAQAVRPRSLGKFRDLLAATVRSPAMLVYLDNAASRNGKVNENYARELLELHTLGVDGGYTQH
DVQELARVLTGVGINLSGKPAKPKGPHAADLISEGLFEFNPARHAYGDKVLLGHTIKGRGWPEVEQALDILASHPATARH
ISRKLATFFVADTPPKALVDQLAQAYTQSEGDIAAVLRALFNSPAFSASLKTGKFKDPVHYVYSALRLALHDQPPLSNAQ
AVANLIDTLGQPLYGRLTPDGYPLTQNDWAGSGQLNTRFEAARTIAAATGSFYQKKDEPRPRMTLSRLSQAYPEPSVFSG
WPAGSRDVIAQTRNLVDANTYLLAAPPFMRR
>AHV94942.1 major Facilitator Superfamily protein [Bordetella holmesii ATCC 51541]
MLPQLAQEFSTTTGQAGHAVTAFAVAYGLLQMFFGPVGDCYGKYRVVCVATFACAIGSAGAAMADSLDMLVICRMLSGAA
GAGIVPLSMAWIGDNVPYERRQATLARFLTGTILGMAAGSLAGGCLQTPSAGGAPFWFWWWAISWSACACWSSCAGNGLK
DCSCSAARPGRAFWLRRGAS
>AHV94943.1 LD-carboxypeptidase family protein [Bordetella holmesii ATCC 51541]
MNPPRKTGHEGHDHDHGHTCGLTCEHHVAPSGGIYLISPSSAVRDPQTVELARERLAAEGFKTVLDRAALATHQRFAGTD
KQRLAGLARAAAQKQPIVMATRGGYGLSRLLPHIDWKAMADSGKRFVGMSDFTAFNLALLAQTGAVSYTGATAVRDFGGK
RIDPLTVALFGEIMRGELEILSFETADADSVDARGVLWGGNLATLVSLLGTPYFPKVRGGILFIEDVSEHPYRIERMLAQ
LAQAGVLQKQKAILLGSFTDYKLAEHDQGYDLPEVIKWLRREVKVPVIVGLPYGHGNLKATLPIGQKVGVATERGLAHLV
IDEHHH
>AHV94944.1 helix-turn-helix family protein [Bordetella holmesii ATCC 51541]
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIV
ELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDT
VEGARLGLRLRGHR
