# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- tRNA-synt_2b PF00587.20 gi|407463878|ref|YP_006774760.1| - 6.6e-47 159.3 0.4 1.5e-46 158.1 0.2 1.7 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|407463878|ref|YP_006774760.1| - 1.6e-16 60.0 0.3 4.5e-16 58.5 0.1 1.9 2 0 0 2 2 2 1 Anticodon binding domain Zn-ribbon_8 PF09723.5 gi|407463878|ref|YP_006774760.1| - 0.022 14.7 0.2 5.1 7.1 0.1 2.6 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_4 PF13717.1 gi|407463878|ref|YP_006774760.1| - 0.18 11.5 2.9 9.4 6.0 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407463878|ref|YP_006774760.1| - 0.2 11.2 3.0 9.3 5.9 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain AP_endonuc_2 PF01261.19 gi|407463879|ref|YP_006774761.1| - 2.8e-34 118.2 0.0 3.8e-34 117.8 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DNA_primase_lrg PF04104.9 gi|407463880|ref|YP_006774762.1| - 4.9e-27 94.8 0.1 1.1e-26 93.6 0.0 1.6 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit DNA_primase_S PF01896.14 gi|407463881|ref|YP_006774763.1| - 2.6e-16 59.7 0.2 3.4e-15 56.1 0.1 2.2 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase small subunit NRDD PF13597.1 gi|407463881|ref|YP_006774763.1| - 0.022 12.8 4.8 0.012 13.7 1.9 1.5 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase PolC_DP2 PF03833.8 gi|407463881|ref|YP_006774763.1| - 0.098 10.3 3.1 0.13 9.8 2.1 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 stn_TNFRSF12A PF12191.3 gi|407463881|ref|YP_006774763.1| - 0.34 10.9 3.4 0.57 10.2 2.3 1.3 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain UPF0182 PF03699.8 gi|407463882|ref|YP_006774764.1| - 9.9e-30 103.1 15.4 1e-27 96.4 10.6 2.7 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0182) GATase PF00117.23 gi|407463883|ref|YP_006774765.1| - 3.2e-20 72.3 0.0 3.7e-20 72.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|407463883|ref|YP_006774765.1| - 1.9e-09 37.3 0.1 2.1e-08 33.8 0.0 2.0 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.14 gi|407463883|ref|YP_006774765.1| - 0.05 13.2 0.1 0.3 10.7 0.1 2.0 1 1 0 1 1 1 0 SNO glutamine amidotransferase family TPR_11 PF13414.1 gi|407463884|ref|YP_006774766.1| - 3e-18 65.2 9.1 4.6e-13 48.6 1.8 2.5 2 0 0 2 2 2 2 TPR repeat TPR_1 PF00515.23 gi|407463884|ref|YP_006774766.1| - 3.8e-16 57.9 16.4 1.7e-09 36.8 0.2 4.4 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407463884|ref|YP_006774766.1| - 5e-16 58.3 1.8 1.3e-08 34.6 0.0 3.2 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407463884|ref|YP_006774766.1| - 1e-14 53.1 10.6 3.5e-07 29.6 0.0 4.5 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407463884|ref|YP_006774766.1| - 1.7e-10 40.1 10.0 6.5e-06 25.9 0.7 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407463884|ref|YP_006774766.1| - 1.7e-08 33.6 21.8 1.6e-07 30.5 0.2 5.2 5 1 1 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407463884|ref|YP_006774766.1| - 5e-08 32.8 0.0 0.00044 20.6 0.0 3.4 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407463884|ref|YP_006774766.1| - 8.6e-08 32.4 1.5 1.8e-05 24.9 0.0 2.8 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.1 gi|407463884|ref|YP_006774766.1| - 7.3e-07 28.9 0.0 4.2e-06 26.5 0.0 2.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407463884|ref|YP_006774766.1| - 7.8e-07 29.6 0.4 0.0013 19.3 0.0 3.0 1 1 1 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|407463884|ref|YP_006774766.1| - 2.4e-05 24.4 4.3 0.59 10.7 0.0 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat Apc3 PF12895.2 gi|407463884|ref|YP_006774766.1| - 0.0012 18.9 4.1 0.14 12.3 1.6 2.3 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 gi|407463884|ref|YP_006774766.1| - 0.0012 18.4 0.0 0.021 14.5 0.0 2.8 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_10 PF13374.1 gi|407463884|ref|YP_006774766.1| - 0.024 14.5 0.0 0.075 12.9 0.0 1.9 1 0 0 1 1 1 0 Tetratricopeptide repeat MIT PF04212.13 gi|407463884|ref|YP_006774766.1| - 0.035 13.9 2.1 0.61 10.0 0.0 3.1 2 1 0 2 2 2 0 MIT (microtubule interacting and transport) domain TPR_15 PF13429.1 gi|407463884|ref|YP_006774766.1| - 0.041 12.9 0.4 0.69 8.9 0.1 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat Peptidase_C39_2 PF13529.1 gi|407463884|ref|YP_006774766.1| - 0.058 13.7 0.2 0.16 12.2 0.0 1.9 2 0 0 2 2 2 0 Peptidase_C39 like family zinc_ribbon_4 PF13717.1 gi|407463885|ref|YP_006774767.1| - 9.3e-05 22.0 2.9 0.00029 20.4 2.0 1.8 1 1 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407463885|ref|YP_006774767.1| - 0.00012 21.5 3.0 0.00033 20.1 2.0 1.7 1 1 0 1 1 1 1 zinc-ribbon domain IBR PF01485.16 gi|407463885|ref|YP_006774767.1| - 0.0028 17.5 1.1 0.0028 17.5 0.7 1.4 2 0 0 2 2 1 1 IBR domain CpXC PF14353.1 gi|407463885|ref|YP_006774767.1| - 0.0041 17.0 2.9 0.0083 16.0 0.1 2.0 1 1 1 2 2 2 1 CpXC protein zf-ribbon_3 PF13248.1 gi|407463885|ref|YP_006774767.1| - 0.007 15.5 3.4 0.055 12.7 2.6 2.0 1 1 1 2 2 2 2 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|407463885|ref|YP_006774767.1| - 0.0086 15.7 0.3 0.011 15.4 0.2 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn_Tnp_IS1 PF03811.8 gi|407463885|ref|YP_006774767.1| - 0.018 14.5 1.8 0.74 9.3 0.1 2.1 2 0 0 2 2 2 0 InsA N-terminal domain Prok-RING_1 PF14446.1 gi|407463885|ref|YP_006774767.1| - 0.02 14.6 2.1 0.025 14.3 1.4 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Zn_Tnp_IS1595 PF12760.2 gi|407463885|ref|YP_006774767.1| - 0.032 14.0 0.2 1.8 8.4 0.0 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Ribosomal_S27e PF01667.12 gi|407463885|ref|YP_006774767.1| - 0.037 13.5 2.5 0.13 11.8 1.8 1.7 1 1 0 1 1 1 0 Ribosomal protein S27 DUF329 PF03884.9 gi|407463885|ref|YP_006774767.1| - 0.042 13.4 3.5 3 7.4 0.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF329) PhnA_Zn_Ribbon PF08274.7 gi|407463885|ref|YP_006774767.1| - 0.042 13.6 3.5 0.26 11.1 0.1 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Zn_Tnp_IS91 PF14319.1 gi|407463885|ref|YP_006774767.1| - 0.046 13.2 0.1 0.046 13.2 0.1 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain zf-ISL3 PF14690.1 gi|407463885|ref|YP_006774767.1| - 0.054 13.5 1.9 1.3 9.0 1.3 2.1 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 UPF0547 PF10571.4 gi|407463885|ref|YP_006774767.1| - 0.054 13.1 8.5 0.28 10.9 5.9 1.9 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 DZR PF12773.2 gi|407463885|ref|YP_006774767.1| - 0.058 13.2 1.5 0.11 12.3 1.1 1.5 1 1 0 1 1 1 0 Double zinc ribbon Ogr_Delta PF04606.7 gi|407463885|ref|YP_006774767.1| - 0.06 13.0 0.7 6.5 6.4 0.1 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger HypA PF01155.14 gi|407463885|ref|YP_006774767.1| - 0.064 12.9 0.3 0.066 12.9 0.2 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Mu-like_Com PF10122.4 gi|407463885|ref|YP_006774767.1| - 0.07 12.2 1.5 0.13 11.2 1.0 1.5 1 1 0 1 1 1 0 Mu-like prophage protein Com DUF2387 PF09526.5 gi|407463885|ref|YP_006774767.1| - 0.08 12.8 2.6 0.13 12.2 1.8 1.4 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) Rota_NS26 PF01525.11 gi|407463885|ref|YP_006774767.1| - 0.15 11.8 0.6 0.16 11.7 0.4 1.0 1 0 0 1 1 1 0 Rotavirus NS26 zf-C2H2_4 PF13894.1 gi|407463885|ref|YP_006774767.1| - 0.17 12.3 1.3 3.4 8.2 0.1 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger DUF35_N PF12172.3 gi|407463885|ref|YP_006774767.1| - 0.17 11.8 2.4 5.2 7.0 0.1 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-H2C2_2 PF13465.1 gi|407463885|ref|YP_006774767.1| - 0.25 11.7 3.3 4.1 7.8 0.2 2.1 2 0 0 2 2 2 0 Zinc-finger double domain zinc-ribbons_6 PF07191.7 gi|407463885|ref|YP_006774767.1| - 0.31 10.8 2.3 0.49 10.2 1.6 1.4 1 1 0 1 1 1 0 zinc-ribbons zf-H2C2_5 PF13909.1 gi|407463885|ref|YP_006774767.1| - 0.32 11.3 3.8 0.42 10.9 0.2 2.1 2 0 0 2 2 2 0 C2H2-type zinc-finger domain zf-DNL PF05180.7 gi|407463885|ref|YP_006774767.1| - 0.37 10.5 2.2 5.9 6.6 0.2 2.1 1 1 1 2 2 2 0 DNL zinc finger Auto_anti-p27 PF06677.7 gi|407463885|ref|YP_006774767.1| - 0.4 10.4 1.8 0.56 10.0 1.3 1.3 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C4_Topoisom PF01396.14 gi|407463885|ref|YP_006774767.1| - 0.41 10.1 2.5 9.4 5.8 0.2 2.1 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-RING_3 PF14369.1 gi|407463885|ref|YP_006774767.1| - 0.72 9.8 6.8 38 4.3 5.1 2.2 1 1 1 2 2 2 0 zinc-finger Zn-ribbon_8 PF09723.5 gi|407463885|ref|YP_006774767.1| - 0.88 9.5 6.1 19 5.3 4.3 2.1 1 1 0 1 1 1 0 Zinc ribbon domain zf-Di19 PF05605.7 gi|407463885|ref|YP_006774767.1| - 0.9 9.7 4.1 1.6 8.9 0.5 2.0 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-RING_4 PF14570.1 gi|407463885|ref|YP_006774767.1| - 3.6 7.2 7.0 24 4.6 0.9 2.2 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zinc_ribbon_2 PF13240.1 gi|407463885|ref|YP_006774767.1| - 7.4 6.2 8.5 47 3.6 5.9 2.0 1 1 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|407463885|ref|YP_006774767.1| - 9.7 5.6 7.0 53 3.2 0.7 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding Ribosomal_S6e PF01092.14 gi|407463886|ref|YP_006774768.1| - 5.3e-20 71.3 0.2 6.5e-20 71.0 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.22 gi|407463887|ref|YP_006774769.1| - 1.7e-41 141.7 0.0 2.9e-41 140.9 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.6 gi|407463887|ref|YP_006774769.1| - 1e-25 89.6 0.5 6.1e-25 87.1 0.1 2.4 2 0 0 2 2 2 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.20 gi|407463887|ref|YP_006774769.1| - 0.00021 21.3 0.4 0.001 19.1 0.2 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|407463887|ref|YP_006774769.1| - 0.0016 18.4 0.0 0.0049 16.8 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase NOB1_Zn_bind PF08772.6 gi|407463887|ref|YP_006774769.1| - 0.03 14.1 0.2 0.076 12.8 0.2 1.6 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like FeoB_N PF02421.13 gi|407463887|ref|YP_006774769.1| - 0.045 13.0 0.2 5.7 6.2 0.0 2.6 3 0 0 3 3 3 0 Ferrous iron transport protein B PduV-EutP PF10662.4 gi|407463887|ref|YP_006774769.1| - 0.083 12.3 0.3 1.3 8.5 0.0 2.8 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation Zn-ribbon_8 PF09723.5 gi|407463887|ref|YP_006774769.1| - 1.5 8.8 4.7 9.8 6.2 3.4 2.1 1 1 0 1 1 1 0 Zinc ribbon domain Fcf1 PF04900.7 gi|407463888|ref|YP_006774770.1| - 1.8e-12 47.1 0.1 2.4e-12 46.8 0.1 1.1 1 0 0 1 1 1 1 Fcf1 PIN_4 PF13638.1 gi|407463888|ref|YP_006774770.1| - 2.6e-05 24.3 1.3 3.3e-05 24.0 0.9 1.1 1 0 0 1 1 1 1 PIN domain PIN PF01850.16 gi|407463888|ref|YP_006774770.1| - 0.016 15.5 0.0 0.029 14.6 0.0 1.4 1 1 0 1 1 1 0 PIN domain PBP PF01161.15 gi|407463889|ref|YP_006774771.1| - 1.7e-32 112.2 0.0 1.9e-32 112.1 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Abi_2 PF07751.6 gi|407463889|ref|YP_006774771.1| - 0.11 12.6 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Abi-like protein STT3 PF02516.9 gi|407463890|ref|YP_006774772.1| - 3.3e-32 112.0 39.7 6.6e-32 111.1 27.5 1.7 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.1 gi|407463890|ref|YP_006774772.1| - 3.2e-05 23.8 14.7 3.2e-05 23.8 10.2 4.0 4 1 0 4 4 4 2 Dolichyl-phosphate-mannose-protein mannosyltransferase Nop10p PF04135.7 gi|407463891|ref|YP_006774773.1| - 2.4e-23 81.6 4.4 2.5e-23 81.5 3.1 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.10 gi|407463891|ref|YP_006774773.1| - 0.0041 16.5 0.5 0.0048 16.3 0.3 1.2 1 0 0 1 1 1 1 RecR protein DUF1272 PF06906.6 gi|407463891|ref|YP_006774773.1| - 0.012 15.4 0.6 0.013 15.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) NOB1_Zn_bind PF08772.6 gi|407463891|ref|YP_006774773.1| - 0.018 14.8 0.3 0.021 14.6 0.2 1.3 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Ribosomal_S27e PF01667.12 gi|407463891|ref|YP_006774773.1| - 0.029 13.9 3.9 0.53 9.8 0.2 2.1 1 1 1 2 2 2 0 Ribosomal protein S27 PolC_DP2 PF03833.8 gi|407463891|ref|YP_006774773.1| - 0.031 11.9 0.5 0.028 12.0 0.3 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-RING_4 PF14570.1 gi|407463891|ref|YP_006774773.1| - 0.079 12.5 3.8 0.12 12.0 2.6 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain PADR1 PF08063.7 gi|407463891|ref|YP_006774773.1| - 0.21 11.0 2.2 0.68 9.3 1.6 1.8 1 1 0 1 1 1 0 PADR1 (NUC008) domain zf-C3HC4_3 PF13920.1 gi|407463891|ref|YP_006774773.1| - 0.22 11.2 3.2 0.27 10.9 2.2 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) TFIIS_C PF01096.13 gi|407463891|ref|YP_006774773.1| - 0.37 10.4 2.8 3.5 7.3 0.2 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-ribbon_3 PF13248.1 gi|407463891|ref|YP_006774773.1| - 0.84 8.9 5.7 0.46 9.7 0.3 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|407463891|ref|YP_006774773.1| - 0.85 9.3 6.0 6.5 6.5 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407463891|ref|YP_006774773.1| - 0.87 9.2 5.8 5.6 6.6 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-tcix PF14952.1 gi|407463891|ref|YP_006774773.1| - 1.6 8.0 4.5 7.5 5.9 0.1 2.1 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding VP_N-CPKC PF11475.3 gi|407463891|ref|YP_006774773.1| - 1.8 8.1 7.4 4 7.0 4.6 2.0 1 1 1 2 2 2 0 Virion protein N terminal domain EIF_2_alpha PF07541.7 gi|407463892|ref|YP_006774774.1| - 1.2e-22 79.7 0.7 1.2e-22 79.7 0.5 2.4 1 1 2 3 3 3 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.18 gi|407463892|ref|YP_006774774.1| - 1.8e-10 40.7 0.1 5.9e-10 39.0 0.0 1.9 1 0 0 1 1 1 1 S1 RNA binding domain DUF1951 PF09188.5 gi|407463892|ref|YP_006774774.1| - 0.49 10.3 5.2 0.18 11.7 1.1 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF1951) HTH_25 PF13413.1 gi|407463892|ref|YP_006774774.1| - 0.76 9.4 3.0 3.1 7.5 0.1 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain CobA_CobO_BtuR PF02572.10 gi|407463893|ref|YP_006774775.1| - 1.4e-61 207.0 0.2 1.6e-61 206.9 0.1 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AAA_14 PF13173.1 gi|407463893|ref|YP_006774775.1| - 0.0089 15.9 1.6 0.017 15.0 1.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|407463893|ref|YP_006774775.1| - 0.042 13.9 2.4 0.16 12.1 1.7 1.8 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|407463893|ref|YP_006774775.1| - 0.053 12.9 1.1 0.15 11.4 0.8 1.8 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|407463893|ref|YP_006774775.1| - 0.058 12.8 1.9 0.36 10.2 0.1 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA PF00004.24 gi|407463893|ref|YP_006774775.1| - 0.32 11.1 1.8 0.79 9.9 1.3 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) GATase_3 PF07685.9 gi|407463894|ref|YP_006774776.1| - 7.4e-32 110.1 0.1 1.2e-31 109.4 0.1 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|407463894|ref|YP_006774776.1| - 5.7e-23 81.3 0.1 1.8e-22 79.6 0.0 1.9 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|407463894|ref|YP_006774776.1| - 7.9e-15 54.9 0.5 4.5e-12 45.9 0.3 2.7 2 1 0 2 2 2 1 AAA domain SNO PF01174.14 gi|407463894|ref|YP_006774776.1| - 7e-07 29.0 0.0 1.1e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 SNO glutamine amidotransferase family CTP_synth_N PF06418.9 gi|407463894|ref|YP_006774776.1| - 0.00021 20.5 2.3 0.00042 19.4 0.0 2.3 3 0 0 3 3 3 1 CTP synthase N-terminus ATLF PF07737.6 gi|407463894|ref|YP_006774776.1| - 0.001 18.4 0.2 0.0046 16.3 0.0 2.0 1 1 1 2 2 2 1 Anthrax toxin lethal factor, N- and C-terminal domain YhjQ PF06564.7 gi|407463894|ref|YP_006774776.1| - 0.011 15.0 0.0 0.019 14.3 0.0 1.3 1 0 0 1 1 1 0 YhjQ protein Fer4_NifH PF00142.13 gi|407463894|ref|YP_006774776.1| - 0.064 12.4 0.4 0.14 11.3 0.1 1.7 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiC PF02570.10 gi|407463895|ref|YP_006774777.1| - 4.8e-73 244.8 0.7 5.5e-73 244.6 0.5 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase CbiX PF01903.12 gi|407463896|ref|YP_006774778.1| - 2.9e-33 114.0 0.0 1.2e-15 57.5 0.0 2.1 2 0 0 2 2 2 2 CbiX CbiK PF06180.6 gi|407463896|ref|YP_006774778.1| - 3e-07 29.8 2.3 4e-07 29.4 1.6 1.2 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.14 gi|407463896|ref|YP_006774778.1| - 2.5e-05 23.4 0.0 0.002 17.1 0.0 2.0 1 1 0 1 1 1 1 Ferrochelatase Enolase_N PF03952.11 gi|407463896|ref|YP_006774778.1| - 2.3 8.1 4.7 3.2 7.6 0.2 2.6 2 1 1 3 3 3 0 Enolase, N-terminal domain CbiG_N PF11760.3 gi|407463897|ref|YP_006774779.1| - 1e-32 111.6 0.3 1.7e-32 110.9 0.2 1.4 1 0 0 1 1 1 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.11 gi|407463897|ref|YP_006774779.1| - 1e-29 103.2 0.3 2.6e-29 101.9 0.0 1.7 2 0 0 2 2 2 1 Cobalamin synthesis G C-terminus CbiG_mid PF11761.3 gi|407463897|ref|YP_006774779.1| - 4.6e-13 49.2 0.0 9e-13 48.2 0.0 1.5 1 0 0 1 1 1 1 Cobalamin biosynthesis central region SpoU_sub_bind PF08032.7 gi|407463897|ref|YP_006774779.1| - 0.037 14.1 0.1 0.22 11.7 0.0 2.3 2 0 0 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding zf-H2C2 PF09337.5 gi|407463897|ref|YP_006774779.1| - 0.22 10.9 1.6 1.1 8.7 0.0 2.7 3 0 0 3 3 3 0 His(2)-Cys(2) zinc finger CAP18_C PF12153.3 gi|407463897|ref|YP_006774779.1| - 1.2 8.8 3.9 0.62 9.7 0.6 2.2 2 0 0 2 2 2 0 LPS binding domain of CAP18 (C terminal) CbiD PF01888.12 gi|407463898|ref|YP_006774780.1| - 6.7e-85 284.2 3.7 1.2e-84 283.3 2.5 1.4 1 0 0 1 1 1 1 CbiD DUF3042 PF11240.3 gi|407463898|ref|YP_006774780.1| - 0.19 11.5 2.0 0.85 9.4 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3042) NAD_binding_10 PF13460.1 gi|407463899|ref|YP_006774781.1| - 5.4e-18 65.6 0.0 7.2e-18 65.2 0.0 1.1 1 0 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 gi|407463899|ref|YP_006774781.1| - 5.3e-12 45.6 0.0 4.8e-11 42.5 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|407463899|ref|YP_006774781.1| - 1.2e-08 34.0 0.3 8.5e-07 27.9 0.3 2.3 1 1 1 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|407463899|ref|YP_006774781.1| - 1.8e-08 33.6 0.0 0.0018 17.2 0.0 3.1 1 1 1 3 3 3 3 Male sterility protein NmrA PF05368.8 gi|407463899|ref|YP_006774781.1| - 2.6e-06 26.8 0.5 4e-06 26.2 0.3 1.3 1 0 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.12 gi|407463899|ref|YP_006774781.1| - 0.0002 20.3 0.0 0.033 13.0 0.0 2.2 1 1 0 2 2 2 2 RmlD substrate binding domain DDE_Tnp_1_3 PF13612.1 gi|407463899|ref|YP_006774781.1| - 0.0058 16.3 0.2 0.014 15.1 0.2 1.7 1 0 0 1 1 1 1 Transposase DDE domain Polysacc_synt_2 PF02719.10 gi|407463899|ref|YP_006774781.1| - 0.071 11.9 0.2 0.56 9.0 0.0 2.1 1 1 0 2 2 2 0 Polysaccharide biosynthesis protein S-AdoMet_synt_C PF02773.11 gi|407463900|ref|YP_006774782.1| - 1.7e-71 238.3 0.0 2.8e-71 237.6 0.0 1.3 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.11 gi|407463900|ref|YP_006774782.1| - 1.4e-50 170.2 0.4 2.1e-49 166.4 0.0 2.2 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.15 gi|407463900|ref|YP_006774782.1| - 1.7e-40 137.2 1.4 5.2e-40 135.7 0.1 2.2 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.14 gi|407463900|ref|YP_006774782.1| - 0.0051 15.3 2.6 0.36 9.2 0.3 2.3 1 1 1 2 2 2 2 S-adenosylmethionine synthetase (AdoMet synthetase) DUF3819 PF12842.2 gi|407463900|ref|YP_006774782.1| - 0.05 13.2 0.0 0.26 10.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3819) LSM PF01423.17 gi|407463901|ref|YP_006774783.1| - 1.5e-18 66.1 1.5 1.7e-18 65.9 1.0 1.0 1 0 0 1 1 1 1 LSM domain Pox_A31 PF05771.6 gi|407463901|ref|YP_006774783.1| - 0.042 13.6 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 Poxvirus A31 protein Rad51 PF08423.6 gi|407463902|ref|YP_006774784.1| - 1.7e-23 82.8 0.0 2e-23 82.5 0.0 1.1 1 0 0 1 1 1 1 Rad51 KaiC PF06745.8 gi|407463902|ref|YP_006774784.1| - 2e-11 43.4 5.2 1.2e-10 40.9 3.6 1.9 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|407463902|ref|YP_006774784.1| - 3.3e-10 39.6 0.0 5.9e-10 38.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain RecA PF00154.16 gi|407463902|ref|YP_006774784.1| - 1.1e-07 31.2 0.1 1.3e-07 30.9 0.1 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_24 PF13479.1 gi|407463902|ref|YP_006774784.1| - 3.4e-05 23.5 0.2 6.1e-05 22.7 0.1 1.4 1 0 0 1 1 1 1 AAA domain Zot PF05707.7 gi|407463902|ref|YP_006774784.1| - 4.3e-05 23.0 0.1 5.3e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) NB-ARC PF00931.17 gi|407463902|ref|YP_006774784.1| - 0.00031 19.6 0.2 0.00038 19.4 0.2 1.2 1 0 0 1 1 1 1 NB-ARC domain Arch_ATPase PF01637.13 gi|407463902|ref|YP_006774784.1| - 0.0025 17.5 2.9 0.004 16.8 2.0 1.5 1 1 0 1 1 1 1 Archaeal ATPase DUF2075 PF09848.4 gi|407463902|ref|YP_006774784.1| - 0.012 14.6 0.7 0.023 13.6 0.3 1.6 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Miro PF08477.8 gi|407463902|ref|YP_006774784.1| - 0.015 15.8 1.1 0.11 12.9 0.8 2.2 1 1 0 1 1 1 0 Miro-like protein TrwB_AAD_bind PF10412.4 gi|407463902|ref|YP_006774784.1| - 0.019 13.6 0.1 0.032 12.8 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain IstB_IS21 PF01695.12 gi|407463902|ref|YP_006774784.1| - 0.075 12.4 0.3 0.22 10.8 0.1 1.8 1 1 1 2 2 2 0 IstB-like ATP binding protein AAA_22 PF13401.1 gi|407463902|ref|YP_006774784.1| - 0.093 12.8 3.0 0.28 11.3 2.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|407463902|ref|YP_006774784.1| - 0.16 11.8 2.5 0.35 10.7 1.7 1.7 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|407463902|ref|YP_006774784.1| - 0.17 11.6 0.0 0.31 10.8 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain CbiA PF01656.18 gi|407463902|ref|YP_006774784.1| - 0.19 11.1 1.2 0.35 10.2 0.2 1.7 1 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain ABC_tran PF00005.22 gi|407463902|ref|YP_006774784.1| - 0.81 9.9 4.1 0.81 9.9 2.3 1.5 1 1 0 1 1 1 0 ABC transporter tRNA_anti-codon PF01336.20 gi|407463903|ref|YP_006774785.1| - 1.5e-12 47.1 0.1 0.0056 16.5 0.0 3.6 3 0 0 3 3 3 3 OB-fold nucleic acid binding domain DUF3460 PF11943.3 gi|407463903|ref|YP_006774785.1| - 0.05 13.6 0.6 0.2 11.7 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3460) ABC_tran PF00005.22 gi|407463904|ref|YP_006774786.1| - 3.5e-28 98.6 0.0 5.5e-28 97.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|407463904|ref|YP_006774786.1| - 4.6e-12 46.4 5.2 5.9e-11 42.8 0.4 3.0 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|407463904|ref|YP_006774786.1| - 7.4e-06 25.2 0.0 7.4e-06 25.2 0.0 2.7 2 1 1 3 3 3 1 AAA ATPase domain AAA_29 PF13555.1 gi|407463904|ref|YP_006774786.1| - 0.0015 18.0 0.6 0.0029 17.0 0.4 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.1 gi|407463904|ref|YP_006774786.1| - 0.012 15.4 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Mg_chelatase PF01078.16 gi|407463904|ref|YP_006774786.1| - 0.015 14.4 0.0 0.025 13.7 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI SMC_N PF02463.14 gi|407463904|ref|YP_006774786.1| - 0.1 11.8 0.3 13 4.9 0.0 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain ArgK PF03308.11 gi|407463904|ref|YP_006774786.1| - 0.1 11.3 0.2 0.17 10.5 0.2 1.3 1 0 0 1 1 1 0 ArgK protein AAA_17 PF13207.1 gi|407463904|ref|YP_006774786.1| - 0.27 12.0 1.1 1.3 9.8 0.8 2.4 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.1 gi|407463904|ref|YP_006774786.1| - 0.33 11.2 10.1 3.6 7.8 7.0 2.6 1 1 0 1 1 1 0 AAA domain ABC2_membrane PF01061.19 gi|407463905|ref|YP_006774787.1| - 4e-22 78.4 20.3 4e-22 78.4 14.1 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|407463905|ref|YP_006774787.1| - 9.2e-16 57.8 25.3 9.2e-16 57.8 17.5 2.0 1 1 1 2 2 2 2 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|407463905|ref|YP_006774787.1| - 1.5e-09 37.3 32.0 1.9e-09 37.0 22.2 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein DUF3493 PF11998.3 gi|407463905|ref|YP_006774787.1| - 0.16 11.9 0.7 0.39 10.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3493) ABC2_membrane_5 PF13346.1 gi|407463905|ref|YP_006774787.1| - 0.16 11.2 32.4 0.65 9.2 22.3 2.0 1 1 0 1 1 1 0 ABC-2 family transporter protein Glycophorin_A PF01102.13 gi|407463905|ref|YP_006774787.1| - 1.5 8.5 3.3 11 5.8 0.4 2.4 2 0 0 2 2 2 0 Glycophorin A UDPG_MGDP_dh_N PF03721.9 gi|407463906|ref|YP_006774788.1| - 5.5e-05 22.6 0.1 0.012 15.0 0.0 2.3 1 1 1 2 2 2 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.13 gi|407463906|ref|YP_006774788.1| - 0.0001 22.2 0.0 0.0002 21.3 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain UDPG_MGDP_dh PF00984.14 gi|407463906|ref|YP_006774788.1| - 0.0023 18.1 0.0 0.0044 17.2 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain OKR_DC_1 PF01276.15 gi|407463906|ref|YP_006774788.1| - 0.068 11.7 0.0 0.094 11.2 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain NAD_binding_2 PF03446.10 gi|407463906|ref|YP_006774788.1| - 0.098 12.4 0.0 0.46 10.3 0.0 2.0 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase DUF354 PF04007.7 gi|407463907|ref|YP_006774789.1| - 2.4e-48 164.7 9.8 2.7e-48 164.5 6.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Epimerase_2 PF02350.14 gi|407463907|ref|YP_006774789.1| - 0.00011 21.1 1.5 0.0002 20.2 0.9 1.5 2 0 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase LpxB PF02684.10 gi|407463907|ref|YP_006774789.1| - 0.00038 19.2 0.3 0.00061 18.5 0.2 1.5 1 0 0 1 1 1 1 Lipid-A-disaccharide synthetase Glyco_trans_1_3 PF13528.1 gi|407463907|ref|YP_006774789.1| - 0.0033 16.6 0.0 0.01 15.0 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 1 KH_5 PF13184.1 gi|407463907|ref|YP_006774789.1| - 3.3 7.5 10.4 1.3 8.9 0.3 4.1 4 1 1 5 5 5 0 NusA-like KH domain 3HCDH_N PF02737.13 gi|407463908|ref|YP_006774790.1| - 0.11 12.1 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.18 gi|407463908|ref|YP_006774790.1| - 0.11 12.2 0.0 0.33 10.6 0.0 1.9 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GrpE PF01025.14 gi|407463909|ref|YP_006774791.1| - 2.9e-40 137.5 2.8 3.5e-40 137.2 1.9 1.0 1 0 0 1 1 1 1 GrpE HSP70 PF00012.15 gi|407463910|ref|YP_006774792.1| - 5.5e-215 714.8 17.6 3.5e-195 649.4 9.2 2.0 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.8 gi|407463910|ref|YP_006774792.1| - 3.6e-18 65.2 5.8 3.6e-18 65.2 4.0 2.4 2 1 0 2 2 2 1 MreB/Mbl protein Collagen PF01391.13 gi|407463910|ref|YP_006774792.1| - 0.00079 18.9 10.0 0.0014 18.0 6.9 1.3 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) FGGY_C PF02782.11 gi|407463910|ref|YP_006774792.1| - 0.022 14.3 0.0 0.044 13.3 0.0 1.5 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain FtsA PF14450.1 gi|407463910|ref|YP_006774792.1| - 9.9 6.0 13.0 8.5 6.2 0.2 4.3 4 1 0 4 4 4 0 Cell division protein FtsA CTDII PF01556.13 gi|407463911|ref|YP_006774793.1| - 1.1e-26 92.5 9.3 3e-22 78.3 0.5 3.3 3 0 0 3 3 3 3 DnaJ C terminal domain DnaJ PF00226.26 gi|407463911|ref|YP_006774793.1| - 9.6e-26 89.3 1.8 1.7e-25 88.5 1.2 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.14 gi|407463911|ref|YP_006774793.1| - 1e-15 57.5 17.5 2.1e-15 56.4 12.1 1.6 1 0 0 1 1 1 1 DnaJ central domain HypA PF01155.14 gi|407463911|ref|YP_006774793.1| - 3.3 7.4 9.3 0.14 11.8 0.5 2.2 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family NT5C PF06941.7 gi|407463912|ref|YP_006774794.1| - 1.4e-11 44.2 1.4 2.1e-11 43.7 0.9 1.2 1 0 0 1 1 1 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Yippee-Mis18 PF03226.9 gi|407463913|ref|YP_006774795.1| - 0.072 13.1 0.4 0.088 12.8 0.3 1.3 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Mu-like_Com PF10122.4 gi|407463913|ref|YP_006774795.1| - 0.11 11.6 0.0 0.17 10.9 0.0 1.4 1 0 0 1 1 1 0 Mu-like prophage protein Com Asparaginase PF00710.15 gi|407463914|ref|YP_006774796.1| - 1.1e-77 261.0 0.0 1.3e-77 260.7 0.0 1.1 1 0 0 1 1 1 1 Asparaginase AAA PF00004.24 gi|407463915|ref|YP_006774797.1| - 1e-99 329.8 0.0 2.6e-49 166.7 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|407463915|ref|YP_006774797.1| - 1.5e-28 98.5 0.2 4.6e-28 96.9 0.1 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.9 gi|407463915|ref|YP_006774797.1| - 6.6e-16 58.6 0.0 3.4e-07 30.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|407463915|ref|YP_006774797.1| - 2.3e-14 53.0 0.0 8.6e-09 34.7 0.0 2.7 2 1 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|407463915|ref|YP_006774797.1| - 4.6e-14 52.8 0.1 5.5e-06 26.4 0.0 3.0 2 1 1 3 3 3 2 AAA ATPase domain AAA_22 PF13401.1 gi|407463915|ref|YP_006774797.1| - 4.2e-13 49.5 0.1 4e-05 23.7 0.0 4.0 2 2 0 2 2 2 2 AAA domain AAA_17 PF13207.1 gi|407463915|ref|YP_006774797.1| - 1.8e-11 44.9 0.1 3.5e-05 24.6 0.0 3.0 2 1 0 2 2 2 2 AAA domain AAA_33 PF13671.1 gi|407463915|ref|YP_006774797.1| - 2e-10 40.7 0.0 0.00061 19.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.8 gi|407463915|ref|YP_006774797.1| - 2.4e-10 39.6 1.1 0.00011 21.0 0.0 2.7 3 0 0 3 3 2 2 TIP49 C-terminus AAA_14 PF13173.1 gi|407463915|ref|YP_006774797.1| - 6.6e-10 38.9 0.0 0.00016 21.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.9 gi|407463915|ref|YP_006774797.1| - 9.2e-10 38.3 0.9 0.00088 19.0 0.1 4.0 3 2 0 3 3 2 2 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.7 gi|407463915|ref|YP_006774797.1| - 1.9e-09 36.9 0.3 6.6e-05 22.0 0.0 3.1 3 0 0 3 3 3 2 Zeta toxin IstB_IS21 PF01695.12 gi|407463915|ref|YP_006774797.1| - 6.5e-09 35.4 0.3 0.0033 16.8 0.0 2.3 2 0 0 2 2 2 2 IstB-like ATP binding protein Arch_ATPase PF01637.13 gi|407463915|ref|YP_006774797.1| - 3.8e-08 33.3 0.0 0.0044 16.7 0.0 3.7 2 2 1 3 3 3 2 Archaeal ATPase AAA_19 PF13245.1 gi|407463915|ref|YP_006774797.1| - 1.3e-07 31.2 4.1 0.0051 16.5 0.1 3.5 3 0 0 3 3 3 2 Part of AAA domain CDC48_2 PF02933.12 gi|407463915|ref|YP_006774797.1| - 1.4e-07 31.0 0.0 3.3e-07 29.8 0.0 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 Sigma54_activat PF00158.21 gi|407463915|ref|YP_006774797.1| - 1.8e-07 30.8 0.1 0.033 13.6 0.0 3.1 2 1 0 2 2 2 2 Sigma-54 interaction domain AAA_28 PF13521.1 gi|407463915|ref|YP_006774797.1| - 8.9e-07 29.0 0.0 0.011 15.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.17 gi|407463915|ref|YP_006774797.1| - 1.2e-06 28.6 0.0 0.037 14.1 0.0 2.7 2 0 0 2 2 2 2 RNA helicase AAA_18 PF13238.1 gi|407463915|ref|YP_006774797.1| - 1.4e-06 28.6 0.0 0.021 15.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain KaiC PF06745.8 gi|407463915|ref|YP_006774797.1| - 3.7e-06 26.2 2.0 0.1 11.7 0.0 3.8 3 1 1 4 4 4 2 KaiC Bac_DnaA PF00308.13 gi|407463915|ref|YP_006774797.1| - 3.9e-06 26.6 0.0 0.0061 16.2 0.0 2.6 3 0 0 3 3 2 2 Bacterial dnaA protein PhoH PF02562.11 gi|407463915|ref|YP_006774797.1| - 5.2e-06 25.8 0.2 0.068 12.3 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein NACHT PF05729.7 gi|407463915|ref|YP_006774797.1| - 5.6e-06 26.1 0.0 0.4 10.3 0.0 3.8 4 0 0 4 4 4 2 NACHT domain AAA_25 PF13481.1 gi|407463915|ref|YP_006774797.1| - 5.8e-06 25.8 6.1 0.59 9.5 0.2 4.3 2 2 1 4 4 4 2 AAA domain Mg_chelatase PF01078.16 gi|407463915|ref|YP_006774797.1| - 6.7e-06 25.4 1.0 0.033 13.3 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activ_2 PF14532.1 gi|407463915|ref|YP_006774797.1| - 8.3e-06 25.9 0.0 0.1 12.6 0.0 2.7 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_24 PF13479.1 gi|407463915|ref|YP_006774797.1| - 3.8e-05 23.3 0.2 0.026 14.1 0.0 2.7 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.17 gi|407463915|ref|YP_006774797.1| - 5.2e-05 22.2 0.0 0.095 11.5 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain ABC_tran PF00005.22 gi|407463915|ref|YP_006774797.1| - 5.8e-05 23.4 0.0 0.56 10.5 0.0 2.7 2 0 0 2 2 2 2 ABC transporter DUF815 PF05673.8 gi|407463915|ref|YP_006774797.1| - 0.00011 21.2 0.0 0.079 11.8 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_3 PF07726.6 gi|407463915|ref|YP_006774797.1| - 0.00036 20.1 0.0 0.37 10.4 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.4 gi|407463915|ref|YP_006774797.1| - 0.00059 18.9 0.0 0.32 9.9 0.0 2.5 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) NTPase_1 PF03266.10 gi|407463915|ref|YP_006774797.1| - 0.00068 19.3 1.8 3.5 7.3 0.0 4.3 3 1 1 4 4 4 0 NTPase AAA_30 PF13604.1 gi|407463915|ref|YP_006774797.1| - 0.0011 18.5 0.1 1.1 8.8 0.0 2.6 2 0 0 2 2 2 1 AAA domain Parvo_NS1 PF01057.12 gi|407463915|ref|YP_006774797.1| - 0.0012 17.7 0.0 0.26 10.1 0.0 2.2 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 UPF0079 PF02367.12 gi|407463915|ref|YP_006774797.1| - 0.0012 18.4 0.1 1.9 8.1 0.0 2.5 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 ATP-synt_ab PF00006.20 gi|407463915|ref|YP_006774797.1| - 0.0012 18.3 0.0 1 8.8 0.0 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain SKI PF01202.17 gi|407463915|ref|YP_006774797.1| - 0.0017 18.2 0.0 0.74 9.6 0.0 2.4 2 0 0 2 2 2 1 Shikimate kinase ResIII PF04851.10 gi|407463915|ref|YP_006774797.1| - 0.0021 17.9 0.0 0.75 9.5 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit T2SE PF00437.15 gi|407463915|ref|YP_006774797.1| - 0.0029 16.5 0.0 1.7 7.4 0.0 2.3 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_11 PF13086.1 gi|407463915|ref|YP_006774797.1| - 0.0067 16.0 0.0 1.4 8.4 0.0 2.7 2 1 0 2 2 2 1 AAA domain CPT PF07931.7 gi|407463915|ref|YP_006774797.1| - 0.0081 15.7 0.0 0.86 9.2 0.0 2.5 2 0 0 2 2 2 1 Chloramphenicol phosphotransferase-like protein Guanylate_kin PF00625.16 gi|407463915|ref|YP_006774797.1| - 0.011 15.1 0.1 7.7 5.9 0.0 3.5 2 1 1 3 3 3 0 Guanylate kinase AAA_29 PF13555.1 gi|407463915|ref|YP_006774797.1| - 0.017 14.6 0.2 3.2 7.3 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain AFG1_ATPase PF03969.11 gi|407463915|ref|YP_006774797.1| - 0.019 13.7 0.1 2.8 6.6 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase AAA_10 PF12846.2 gi|407463915|ref|YP_006774797.1| - 0.024 14.0 0.2 4.1 6.7 0.0 3.2 2 2 0 2 2 2 0 AAA-like domain Viral_helicase1 PF01443.13 gi|407463915|ref|YP_006774797.1| - 0.043 13.3 0.0 1.7 8.1 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase PIF1 PF05970.9 gi|407463915|ref|YP_006774797.1| - 0.072 12.0 0.0 7.7 5.3 0.0 2.3 2 0 0 2 2 2 0 PIF1-like helicase KAP_NTPase PF07693.9 gi|407463915|ref|YP_006774797.1| - 0.074 12.0 0.0 6.6 5.6 0.0 2.9 2 1 1 3 3 3 0 KAP family P-loop domain PduV-EutP PF10662.4 gi|407463915|ref|YP_006774797.1| - 0.075 12.5 0.0 17 4.8 0.0 2.7 3 0 0 3 3 2 0 Ethanolamine utilisation - propanediol utilisation DUF258 PF03193.11 gi|407463915|ref|YP_006774797.1| - 0.15 11.2 0.0 8 5.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function, DUF258 IPT PF01745.11 gi|407463915|ref|YP_006774797.1| - 0.15 11.2 0.2 10 5.1 0.0 2.4 2 0 0 2 2 2 0 Isopentenyl transferase Torsin PF06309.6 gi|407463915|ref|YP_006774797.1| - 0.18 11.6 0.1 10 5.9 0.0 2.4 2 0 0 2 2 2 0 Torsin Ribosomal_L2_C PF03947.13 gi|407463916|ref|YP_006774798.1| - 7.7e-34 116.2 1.8 1.5e-33 115.3 1.2 1.5 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.18 gi|407463916|ref|YP_006774798.1| - 7e-08 32.3 0.0 1.8e-07 31.0 0.0 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Acylphosphatase PF00708.13 gi|407463917|ref|YP_006774799.1| - 2.7e-16 59.4 0.1 2.9e-16 59.3 0.1 1.0 1 0 0 1 1 1 1 Acylphosphatase ATP_bind_3 PF01171.15 gi|407463919|ref|YP_006774801.1| - 1.9e-20 73.1 0.0 2.9e-20 72.5 0.0 1.3 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.11 gi|407463919|ref|YP_006774801.1| - 4.8e-05 22.0 0.0 8.4e-05 21.2 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase PAPS_reduct PF01507.14 gi|407463919|ref|YP_006774801.1| - 0.0036 17.1 0.0 0.0078 16.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family DUF4145 PF13643.1 gi|407463919|ref|YP_006774801.1| - 0.038 13.8 0.4 0.25 11.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4145) DUF2392 PF10288.4 gi|407463919|ref|YP_006774801.1| - 0.069 13.4 0.2 0.3 11.4 0.1 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2392) Asn_synthase PF00733.16 gi|407463919|ref|YP_006774801.1| - 0.11 11.9 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase Peptidase_M50 PF02163.17 gi|407463920|ref|YP_006774802.1| - 3.7e-25 88.0 1.1 2e-24 85.6 0.0 2.4 2 1 0 2 2 2 1 Peptidase family M50 PDZ_2 PF13180.1 gi|407463920|ref|YP_006774802.1| - 2e-09 37.2 0.0 6e-09 35.6 0.0 1.7 1 1 0 1 1 1 1 PDZ domain PDZ PF00595.19 gi|407463920|ref|YP_006774802.1| - 0.0022 18.1 0.0 0.0055 16.8 0.0 1.6 1 0 0 1 1 1 1 PDZ domain (Also known as DHR or GLGF) Plug PF07715.10 gi|407463920|ref|YP_006774802.1| - 0.05 13.9 0.1 0.11 12.8 0.1 1.5 1 0 0 1 1 1 0 TonB-dependent Receptor Plug Domain eRF1_1 PF03463.10 gi|407463921|ref|YP_006774803.1| - 1.5e-20 73.1 0.5 1.7e-20 72.9 0.3 1.0 1 0 0 1 1 1 1 eRF1 domain 1 UPF0047 PF01894.12 gi|407463923|ref|YP_006774805.1| - 9.7e-37 125.3 0.0 1.1e-36 125.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF2387 PF09526.5 gi|407463924|ref|YP_006774806.1| - 0.015 15.2 0.5 0.017 15.0 0.4 1.2 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) Lar_restr_allev PF14354.1 gi|407463924|ref|YP_006774806.1| - 0.25 11.6 2.6 0.37 11.1 1.8 1.4 1 1 0 1 1 1 0 Restriction alleviation protein Lar Fe_dep_repr_C PF02742.10 gi|407463925|ref|YP_006774807.1| - 2.7e-20 71.8 0.3 2.7e-20 71.8 0.2 1.6 2 0 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.14 gi|407463925|ref|YP_006774807.1| - 1.6e-14 53.5 0.1 2.6e-14 52.9 0.1 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.1 gi|407463925|ref|YP_006774807.1| - 2.8e-05 24.3 0.0 4.3e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.17 gi|407463925|ref|YP_006774807.1| - 5.9e-05 22.6 0.0 9.4e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.15 gi|407463925|ref|YP_006774807.1| - 0.0002 21.3 0.1 0.00045 20.2 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulator MarR_2 PF12802.2 gi|407463925|ref|YP_006774807.1| - 0.00069 19.2 0.0 0.0011 18.5 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.1 gi|407463925|ref|YP_006774807.1| - 0.0015 18.2 0.0 0.0029 17.3 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.14 gi|407463925|ref|YP_006774807.1| - 0.002 17.7 0.1 0.0035 17.0 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_1 PF00126.22 gi|407463925|ref|YP_006774807.1| - 0.0022 17.6 0.0 0.0056 16.3 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_45 PF14947.1 gi|407463925|ref|YP_006774807.1| - 0.0029 17.4 0.1 0.0041 16.8 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_5 PF01022.15 gi|407463925|ref|YP_006774807.1| - 0.012 15.2 0.1 0.048 13.3 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family TFIIE_beta PF02186.10 gi|407463925|ref|YP_006774807.1| - 0.033 14.1 0.1 0.069 13.1 0.0 1.5 1 0 0 1 1 1 0 TFIIE beta subunit core domain IF2_N PF04760.10 gi|407463925|ref|YP_006774807.1| - 0.045 13.4 0.8 0.11 12.2 0.1 2.0 2 1 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region ANT PF03374.9 gi|407463925|ref|YP_006774807.1| - 0.066 13.2 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Phage antirepressor protein KilAC domain NLPC_P60 PF00877.14 gi|407463925|ref|YP_006774807.1| - 0.089 12.6 0.0 0.19 11.5 0.0 1.6 2 0 0 2 2 2 0 NlpC/P60 family HTH_6 PF01418.12 gi|407463925|ref|YP_006774807.1| - 0.11 12.2 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family HSP90 PF00183.13 gi|407463925|ref|YP_006774807.1| - 0.11 10.8 0.2 0.13 10.6 0.1 1.1 1 0 0 1 1 1 0 Hsp90 protein TrmB PF01978.14 gi|407463926|ref|YP_006774808.1| - 6.9e-22 76.9 0.1 1.7e-21 75.7 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.3 gi|407463926|ref|YP_006774808.1| - 1.2e-05 24.4 0.0 1.4e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_IclR PF09339.5 gi|407463926|ref|YP_006774808.1| - 1.2e-05 24.7 0.0 0.00024 20.6 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|407463926|ref|YP_006774808.1| - 0.00013 21.2 0.0 0.0003 20.1 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|407463926|ref|YP_006774808.1| - 0.0033 17.1 0.0 0.0069 16.0 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|407463926|ref|YP_006774808.1| - 0.0066 16.7 0.0 0.046 14.0 0.0 2.2 2 0 0 2 2 2 1 Winged helix DNA-binding domain Penicillinase_R PF03965.11 gi|407463926|ref|YP_006774808.1| - 0.018 15.1 0.1 0.062 13.3 0.0 1.9 2 0 0 2 2 2 0 Penicillinase repressor MarR_2 PF12802.2 gi|407463926|ref|YP_006774808.1| - 0.022 14.4 0.0 0.037 13.6 0.0 1.4 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.15 gi|407463926|ref|YP_006774808.1| - 0.059 13.4 0.0 0.15 12.1 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.6 gi|407463926|ref|YP_006774808.1| - 0.062 13.1 0.0 0.16 11.8 0.0 1.7 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Radical_SAM PF04055.16 gi|407463927|ref|YP_006774809.1| - 2.2e-14 54.0 0.2 2.2e-14 54.0 0.1 2.8 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|407463927|ref|YP_006774809.1| - 2.1e-07 30.9 0.0 2.1e-07 30.9 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|407463927|ref|YP_006774809.1| - 4.5e-07 30.0 0.0 1.4e-06 28.4 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain Glycos_transf_1 PF00534.15 gi|407463929|ref|YP_006774811.1| - 1.1e-07 31.3 0.0 1.3e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|407463929|ref|YP_006774811.1| - 0.0091 16.1 0.0 0.012 15.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Exostosin PF03016.10 gi|407463929|ref|YP_006774811.1| - 0.091 11.7 0.1 0.1 11.6 0.1 1.2 1 1 0 1 1 1 0 Exostosin family RmlD_sub_bind PF04321.12 gi|407463930|ref|YP_006774812.1| - 7.8e-39 133.2 0.0 1.7e-33 115.7 0.0 2.0 1 1 1 2 2 2 2 RmlD substrate binding domain Epimerase PF01370.16 gi|407463930|ref|YP_006774812.1| - 8.2e-23 81.0 0.0 1.4e-21 77.0 0.0 2.3 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|407463930|ref|YP_006774812.1| - 2.7e-11 42.6 0.2 6e-11 41.5 0.0 1.6 2 1 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|407463930|ref|YP_006774812.1| - 1.1e-10 40.8 0.0 4.6e-10 38.8 0.0 1.9 2 0 0 2 2 2 1 Male sterility protein Polysacc_synt_2 PF02719.10 gi|407463930|ref|YP_006774812.1| - 2.3e-10 39.8 0.3 3.5e-08 32.7 0.0 2.3 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein adh_short PF00106.20 gi|407463930|ref|YP_006774812.1| - 1.6e-06 28.1 0.0 0.0002 21.3 0.0 2.2 1 1 1 2 2 2 1 short chain dehydrogenase NAD_binding_10 PF13460.1 gi|407463930|ref|YP_006774812.1| - 0.0082 16.1 0.0 0.031 14.2 0.0 1.9 2 1 0 2 2 2 1 NADH(P)-binding adh_short_C2 PF13561.1 gi|407463930|ref|YP_006774812.1| - 0.036 13.8 0.0 0.053 13.2 0.0 1.2 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Epimerase_2 PF02350.14 gi|407463931|ref|YP_006774813.1| - 3.4e-93 312.1 0.0 4e-93 311.9 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.7 gi|407463931|ref|YP_006774813.1| - 0.00092 18.1 0.8 0.001 18.0 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Med15_fungi PF05397.7 gi|407463931|ref|YP_006774813.1| - 0.085 12.8 0.5 5.6 6.9 0.3 2.5 1 1 0 1 1 1 0 Mediator complex subunit 15 Polysacc_synt_2 PF02719.10 gi|407463932|ref|YP_006774814.1| - 2.6e-100 335.1 0.3 3.1e-100 334.8 0.2 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.16 gi|407463932|ref|YP_006774814.1| - 7.8e-21 74.5 0.0 1.1e-19 70.7 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|407463932|ref|YP_006774814.1| - 5.5e-18 64.6 0.2 2.6e-17 62.4 0.1 1.8 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|407463932|ref|YP_006774814.1| - 2.5e-11 43.0 0.1 7.3e-11 41.4 0.0 1.7 2 1 1 3 3 3 1 Male sterility protein RmlD_sub_bind PF04321.12 gi|407463932|ref|YP_006774814.1| - 4.7e-09 35.5 0.0 1.8e-07 30.3 0.0 2.3 1 1 0 1 1 1 1 RmlD substrate binding domain adh_short PF00106.20 gi|407463932|ref|YP_006774814.1| - 9.6e-09 35.3 0.0 1.7e-08 34.5 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_10 PF13460.1 gi|407463932|ref|YP_006774814.1| - 2.5e-05 24.3 0.0 4.1e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding NmrA PF05368.8 gi|407463932|ref|YP_006774814.1| - 3.1e-05 23.3 0.1 5.7e-05 22.4 0.1 1.5 1 0 0 1 1 1 1 NmrA-like family KR PF08659.5 gi|407463932|ref|YP_006774814.1| - 0.00016 21.4 0.0 0.00031 20.4 0.0 1.4 1 1 0 1 1 1 1 KR domain Shikimate_DH PF01488.15 gi|407463932|ref|YP_006774814.1| - 0.01 15.9 1.3 0.022 14.8 0.1 2.1 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Polysacc_syn_2C PF08485.5 gi|407463932|ref|YP_006774814.1| - 0.016 14.6 0.8 0.04 13.4 0.2 1.9 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein C-terminal Semialdhyde_dh PF01118.19 gi|407463932|ref|YP_006774814.1| - 0.019 15.2 0.0 0.42 10.9 0.0 2.5 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|407463932|ref|YP_006774814.1| - 0.044 14.2 0.2 0.5 10.8 0.0 2.7 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Glycos_transf_2 PF00535.21 gi|407463933|ref|YP_006774815.1| - 1.6e-36 125.5 1.6 2.4e-36 124.9 1.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|407463933|ref|YP_006774815.1| - 8.6e-17 61.6 0.0 4.6e-16 59.3 0.0 1.9 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|407463933|ref|YP_006774815.1| - 6.1e-13 48.4 2.4 8.7e-13 47.9 1.6 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|407463933|ref|YP_006774815.1| - 0.00061 20.0 0.1 0.0019 18.4 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|407463933|ref|YP_006774815.1| - 0.0018 17.5 0.0 0.0026 17.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.1 gi|407463933|ref|YP_006774815.1| - 0.0071 16.0 0.0 0.012 15.3 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Anp1 PF03452.9 gi|407463933|ref|YP_006774815.1| - 0.03 13.4 0.3 1.4 7.9 0.0 2.3 1 1 0 2 2 2 0 Anp1 AhpC-TSA PF00578.16 gi|407463933|ref|YP_006774815.1| - 0.11 12.2 0.0 0.24 11.0 0.0 1.6 1 1 0 1 1 1 0 AhpC/TSA family CHD5 PF04420.9 gi|407463934|ref|YP_006774816.1| - 0.022 14.4 1.8 0.022 14.4 1.2 1.6 2 0 0 2 2 2 0 CHD5-like protein Peptidase_U4 PF03419.8 gi|407463934|ref|YP_006774816.1| - 0.078 12.0 1.1 0.12 11.4 0.8 1.2 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Methyltransf_11 PF08241.7 gi|407463935|ref|YP_006774817.1| - 3.7e-09 36.9 0.0 3.5e-08 33.8 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407463935|ref|YP_006774817.1| - 1.5e-05 24.7 0.0 2.6e-05 23.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407463935|ref|YP_006774817.1| - 1.9e-05 25.0 0.3 4.2e-05 23.9 0.2 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|407463935|ref|YP_006774817.1| - 6e-05 23.3 0.0 0.00011 22.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|407463935|ref|YP_006774817.1| - 0.00017 20.9 0.9 0.0082 15.5 0.7 2.1 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_31 PF13847.1 gi|407463935|ref|YP_006774817.1| - 0.00045 19.8 4.5 0.0025 17.4 3.1 2.0 1 1 0 1 1 1 1 Methyltransferase domain Glycos_transf_1 PF00534.15 gi|407463936|ref|YP_006774818.1| - 1.2e-12 47.6 0.4 2.8e-12 46.3 0.3 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|407463936|ref|YP_006774818.1| - 1.3e-09 38.0 0.0 2.6e-09 37.0 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.1 gi|407463936|ref|YP_006774818.1| - 5.9e-06 26.4 0.0 1.1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 PS_pyruv_trans PF04230.8 gi|407463936|ref|YP_006774818.1| - 0.023 14.3 0.4 0.023 14.3 0.2 1.9 2 0 0 2 2 2 0 Polysaccharide pyruvyl transferase Exostosin PF03016.10 gi|407463936|ref|YP_006774818.1| - 0.033 13.2 0.0 0.044 12.8 0.0 1.4 1 1 0 1 1 1 0 Exostosin family DUF4285 PF14113.1 gi|407463936|ref|YP_006774818.1| - 0.17 11.9 1.2 0.81 9.6 0.8 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4285) IF-2B PF01008.12 gi|407463937|ref|YP_006774819.1| - 2.3e-86 289.3 1.8 2.9e-86 288.9 1.3 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family DUF59 PF01883.14 gi|407463938|ref|YP_006774820.1| - 4e-16 58.7 0.3 1.1e-15 57.3 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function DUF59 PqqD PF05402.7 gi|407463938|ref|YP_006774820.1| - 4.5e-09 36.1 0.1 7.2e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 Coenzyme PQQ synthesis protein D (PqqD) HemN_C PF06969.11 gi|407463938|ref|YP_006774820.1| - 0.088 12.8 0.3 0.24 11.4 0.1 1.8 2 0 0 2 2 2 0 HemN C-terminal domain MukE PF04288.8 gi|407463938|ref|YP_006774820.1| - 0.11 11.3 0.0 0.17 10.6 0.0 1.2 1 0 0 1 1 1 0 MukE-like family adh_short_C2 PF13561.1 gi|407463939|ref|YP_006774821.1| - 6.6e-09 35.8 0.0 8.6e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.20 gi|407463939|ref|YP_006774821.1| - 7.5e-05 22.7 0.0 0.042 13.7 0.0 2.2 1 1 0 2 2 2 2 short chain dehydrogenase RmlD_sub_bind PF04321.12 gi|407463939|ref|YP_006774821.1| - 0.035 13.0 0.0 0.053 12.3 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Motile_Sperm PF00635.21 gi|407463943|ref|YP_006774825.1| - 0.01 15.4 0.4 0.02 14.5 0.2 1.5 1 1 0 1 1 1 0 MSP (Major sperm protein) domain EMP24_GP25L PF01105.19 gi|407463943|ref|YP_006774825.1| - 0.025 14.3 0.1 0.038 13.7 0.1 1.4 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD YcgR_2 PF12945.2 gi|407463943|ref|YP_006774825.1| - 0.036 13.9 0.1 0.093 12.6 0.0 1.9 1 1 1 2 2 2 0 Flagellar protein YcgR FlgD_ig PF13860.1 gi|407463943|ref|YP_006774825.1| - 0.095 12.4 0.1 0.21 11.3 0.1 1.6 1 1 0 1 1 1 0 FlgD Ig-like domain Aminotran_1_2 PF00155.16 gi|407463944|ref|YP_006774826.1| - 1.5e-61 208.4 0.0 1.8e-61 208.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|407463944|ref|YP_006774826.1| - 2.4e-08 33.4 0.0 3.8e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|407463944|ref|YP_006774826.1| - 5.6e-08 31.9 0.0 1.1e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|407463944|ref|YP_006774826.1| - 0.00063 18.9 0.0 0.0015 17.7 0.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|407463944|ref|YP_006774826.1| - 0.00094 17.5 0.0 0.0014 16.9 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_MocR PF12897.2 gi|407463944|ref|YP_006774826.1| - 0.044 12.3 0.0 0.05 12.1 0.0 1.2 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase HRDC PF00570.18 gi|407463944|ref|YP_006774826.1| - 0.056 13.1 0.0 11 5.8 0.0 3.0 3 0 0 3 3 3 0 HRDC domain Pyridox_oxidase PF01243.15 gi|407463945|ref|YP_006774827.1| - 1.1e-18 66.9 0.0 1.6e-18 66.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|407463945|ref|YP_006774827.1| - 2.9e-11 43.3 0.0 3.7e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Ins_P5_2-kin PF06090.7 gi|407463945|ref|YP_006774827.1| - 0.0083 15.2 0.0 0.014 14.4 0.0 1.4 1 0 0 1 1 1 1 Inositol-pentakisphosphate 2-kinase DUF2373 PF10180.4 gi|407463945|ref|YP_006774827.1| - 0.022 14.2 0.0 0.035 13.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2373) DUF4304 PF14137.1 gi|407463945|ref|YP_006774827.1| - 0.049 13.7 0.5 0.069 13.2 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4304) DUF308 PF03729.8 gi|407463946|ref|YP_006774828.1| - 0.0018 18.2 1.1 0.12 12.3 0.1 2.2 2 0 0 2 2 2 2 Short repeat of unknown function (DUF308) DctQ PF04290.7 gi|407463946|ref|YP_006774828.1| - 0.061 13.0 1.9 0.43 10.3 1.9 1.8 1 1 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component ATPase_gene1 PF09527.5 gi|407463946|ref|YP_006774828.1| - 0.061 13.1 2.5 0.073 12.8 0.1 2.0 2 0 0 2 2 2 0 Putative F0F1-ATPase subunit (ATPase_gene1) VPEP PF07589.6 gi|407463946|ref|YP_006774828.1| - 0.09 12.6 0.4 0.09 12.6 0.3 1.8 2 0 0 2 2 2 0 PEP-CTERM motif SdpI PF13630.1 gi|407463946|ref|YP_006774828.1| - 0.14 11.8 0.7 9.9 5.9 0.0 2.1 2 0 0 2 2 2 0 SdpI/YhfL protein family F420_oxidored PF03807.12 gi|407463947|ref|YP_006774829.1| - 6.7e-16 58.5 0.1 1.2e-15 57.6 0.1 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DapB_N PF01113.15 gi|407463947|ref|YP_006774829.1| - 0.02 14.7 0.2 0.044 13.7 0.1 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus NAD_binding_2 PF03446.10 gi|407463947|ref|YP_006774829.1| - 0.049 13.4 0.1 0.086 12.6 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|407463947|ref|YP_006774829.1| - 0.064 12.9 0.0 0.096 12.4 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus His_Phos_1 PF00300.17 gi|407463948|ref|YP_006774830.1| - 1.5e-34 119.3 0.0 1.8e-34 119.1 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Lipase_GDSL_3 PF14606.1 gi|407463948|ref|YP_006774830.1| - 0.039 13.6 0.0 0.058 13.1 0.0 1.4 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family COX2 PF00116.15 gi|407463950|ref|YP_006774832.1| - 7e-20 71.0 1.0 1e-17 64.0 0.0 2.1 1 1 1 2 2 2 2 Cytochrome C oxidase subunit II, periplasmic domain Cupredoxin_1 PF13473.1 gi|407463950|ref|YP_006774832.1| - 4.4e-06 26.5 0.0 5.4e-06 26.2 0.0 1.3 1 1 0 1 1 1 1 Cupredoxin-like domain COX1 PF00115.15 gi|407463951|ref|YP_006774833.1| - 1.3e-140 469.0 60.3 1.6e-140 468.6 41.8 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Copper-bind PF00127.15 gi|407463952|ref|YP_006774834.1| - 9.4e-16 57.8 0.4 5.2e-08 33.0 0.0 2.4 2 0 0 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Cu-oxidase_3 PF07732.10 gi|407463952|ref|YP_006774834.1| - 3.6e-13 49.2 1.5 1.8e-05 24.4 0.0 2.8 2 1 0 2 2 2 2 Multicopper oxidase Cupredoxin_1 PF13473.1 gi|407463952|ref|YP_006774834.1| - 2.5e-07 30.5 0.0 0.0029 17.4 0.0 2.7 2 0 0 2 2 2 2 Cupredoxin-like domain Cu_bind_like PF02298.12 gi|407463952|ref|YP_006774834.1| - 2.9e-07 30.1 0.1 0.039 13.7 0.1 2.9 2 1 0 2 2 2 2 Plastocyanin-like domain Cu-oxidase_2 PF07731.9 gi|407463952|ref|YP_006774834.1| - 3.2e-07 29.9 0.0 0.015 14.8 0.0 2.8 3 1 0 3 3 3 2 Multicopper oxidase SoxE PF06525.6 gi|407463952|ref|YP_006774834.1| - 1.1e-05 24.8 3.6 0.034 13.4 0.2 3.0 2 2 0 2 2 2 2 Sulfocyanin (SoxE) COX2 PF00116.15 gi|407463952|ref|YP_006774834.1| - 0.017 14.9 0.4 2.2 8.1 0.0 2.9 2 2 0 2 2 2 0 Cytochrome C oxidase subunit II, periplasmic domain CHU_C PF13585.1 gi|407463952|ref|YP_006774834.1| - 0.032 14.1 0.3 6.5 6.7 0.0 2.4 2 0 0 2 2 2 0 C-terminal domain of CHU protein family PPC PF04151.10 gi|407463952|ref|YP_006774834.1| - 3.2 8.7 11.0 0.95 10.4 1.0 3.4 2 2 1 3 3 3 0 Bacterial pre-peptidase C-terminal domain COX15-CtaA PF02628.10 gi|407463953|ref|YP_006774835.1| - 1.9e-24 86.1 10.1 2.2e-24 85.8 7.0 1.1 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein DUF4418 PF14387.1 gi|407463953|ref|YP_006774835.1| - 4 7.1 9.1 0.46 10.2 0.3 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4418) Polyketide_cyc2 PF10604.4 gi|407463955|ref|YP_006774837.1| - 3.1e-08 33.8 0.0 3.9e-08 33.5 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.6 gi|407463955|ref|YP_006774837.1| - 2.4e-07 30.8 0.0 3.5e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc PF03364.15 gi|407463955|ref|YP_006774837.1| - 3.4e-07 30.3 0.0 5e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Response_reg PF00072.19 gi|407463956|ref|YP_006774838.1| - 2.1e-22 79.2 0.4 2.3e-22 79.0 0.3 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CPDase PF07823.6 gi|407463956|ref|YP_006774838.1| - 0.0013 18.2 0.0 0.0015 18.0 0.0 1.1 1 0 0 1 1 1 1 Cyclic phosphodiesterase-like protein FleQ PF06490.6 gi|407463956|ref|YP_006774838.1| - 0.017 15.2 0.0 0.022 14.9 0.0 1.1 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ DUF373 PF04123.8 gi|407463956|ref|YP_006774838.1| - 0.092 11.7 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) RE_LlaMI PF09562.5 gi|407463956|ref|YP_006774838.1| - 0.094 11.8 0.1 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 LlaMI restriction endonuclease HATPase_c PF02518.21 gi|407463957|ref|YP_006774839.1| - 8.8e-23 80.1 0.1 1.5e-22 79.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|407463957|ref|YP_006774839.1| - 4.7e-09 36.1 0.0 1.1e-08 34.9 0.0 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.1 gi|407463957|ref|YP_006774839.1| - 1.6e-07 30.9 0.1 3.2e-07 29.9 0.0 1.5 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.1 gi|407463957|ref|YP_006774839.1| - 0.0004 20.0 0.1 0.00086 18.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|407463957|ref|YP_006774839.1| - 0.008 15.9 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Abhydrolase_9_N PF15420.1 gi|407463957|ref|YP_006774839.1| - 0.051 13.3 0.3 0.16 11.7 0.2 1.8 1 0 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus HlyIII PF03006.15 gi|407463957|ref|YP_006774839.1| - 0.68 9.2 23.1 1.9 7.8 8.5 3.1 1 1 1 2 2 2 0 Haemolysin-III related BPD_transp_2 PF02653.11 gi|407463957|ref|YP_006774839.1| - 5 6.0 16.5 0.095 11.6 1.9 2.5 2 1 1 3 3 3 0 Branched-chain amino acid transport system / permease component Methyltransf_11 PF08241.7 gi|407463958|ref|YP_006774840.1| - 4e-16 59.2 0.0 7.4e-16 58.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|407463958|ref|YP_006774840.1| - 5.4e-15 55.6 0.0 1.2e-14 54.4 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|407463958|ref|YP_006774840.1| - 8.6e-13 48.1 0.3 1.3e-12 47.5 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407463958|ref|YP_006774840.1| - 7.2e-09 36.0 0.0 1.5e-08 34.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|407463958|ref|YP_006774840.1| - 4.9e-08 32.3 0.1 6.3e-08 32.0 0.1 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|407463958|ref|YP_006774840.1| - 6.5e-08 32.4 0.0 9.6e-08 31.9 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|407463958|ref|YP_006774840.1| - 1.5e-07 31.4 0.0 2.1e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|407463958|ref|YP_006774840.1| - 2.1e-06 28.2 0.0 3.7e-06 27.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|407463958|ref|YP_006774840.1| - 0.0063 15.9 0.0 0.009 15.4 0.0 1.3 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.9 gi|407463958|ref|YP_006774840.1| - 0.015 14.7 0.0 0.022 14.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain PrmA PF06325.8 gi|407463958|ref|YP_006774840.1| - 0.024 13.7 0.0 0.037 13.1 0.0 1.4 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) CheR PF01739.13 gi|407463958|ref|YP_006774840.1| - 0.07 12.3 0.3 1.9 7.7 0.1 2.8 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain Aminotran_4 PF01063.14 gi|407463959|ref|YP_006774841.1| - 1.4e-43 148.9 0.0 1.7e-43 148.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class IV AA_kinase PF00696.23 gi|407463961|ref|YP_006774843.1| - 2.9e-27 95.7 0.9 5.8e-27 94.7 0.6 1.5 1 0 0 1 1 1 1 Amino acid kinase family YajC PF02699.10 gi|407463961|ref|YP_006774843.1| - 0.06 13.0 0.2 0.16 11.6 0.1 1.7 1 0 0 1 1 1 0 Preprotein translocase subunit ISG65-75 PF11727.3 gi|407463961|ref|YP_006774843.1| - 1.6 7.7 5.3 0.24 10.4 0.9 1.6 2 0 0 2 2 2 0 Invariant surface glycoprotein Glyco_trans_1_3 PF13528.1 gi|407463962|ref|YP_006774844.1| - 8.3e-17 61.3 0.0 1.1e-16 60.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|407463962|ref|YP_006774844.1| - 2.7e-14 53.1 0.1 5.4e-14 52.1 0.1 1.5 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_4 PF13692.1 gi|407463962|ref|YP_006774844.1| - 0.0032 17.6 0.0 0.0061 16.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Ubie_methyltran PF01209.13 gi|407463963|ref|YP_006774845.1| - 1.2e-20 73.6 0.7 1.5e-20 73.3 0.5 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.1 gi|407463963|ref|YP_006774845.1| - 2.8e-19 69.2 0.1 3.5e-19 68.8 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|407463963|ref|YP_006774845.1| - 5.4e-15 55.9 0.0 7.9e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407463963|ref|YP_006774845.1| - 1e-13 51.5 0.0 1.8e-13 50.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|407463963|ref|YP_006774845.1| - 1.3e-12 47.9 0.0 2.2e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407463963|ref|YP_006774845.1| - 3.2e-11 43.1 0.0 5.6e-11 42.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|407463963|ref|YP_006774845.1| - 7.5e-11 42.3 0.0 1.4e-10 41.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|407463963|ref|YP_006774845.1| - 2.6e-09 36.7 0.1 6.3e-09 35.4 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|407463963|ref|YP_006774845.1| - 9.6e-08 32.0 0.0 1.7e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|407463963|ref|YP_006774845.1| - 1.2e-07 31.0 0.0 1.6e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase NodS PF05401.6 gi|407463963|ref|YP_006774845.1| - 1.7e-06 27.6 0.0 2.3e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.8 gi|407463963|ref|YP_006774845.1| - 4e-06 26.1 0.0 5.6e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.12 gi|407463963|ref|YP_006774845.1| - 4.3e-05 22.6 0.0 7.8e-05 21.8 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_32 PF13679.1 gi|407463963|ref|YP_006774845.1| - 0.00012 21.7 0.0 0.00019 21.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|407463963|ref|YP_006774845.1| - 0.00014 21.0 0.1 0.0003 19.9 0.1 1.6 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_2 PF00891.13 gi|407463963|ref|YP_006774845.1| - 0.00014 21.1 0.0 0.0013 17.9 0.0 2.3 1 1 1 2 2 2 1 O-methyltransferase FtsJ PF01728.14 gi|407463963|ref|YP_006774845.1| - 0.0004 20.4 0.0 0.0019 18.2 0.0 1.8 1 1 0 1 1 1 1 FtsJ-like methyltransferase FmrO PF07091.6 gi|407463963|ref|YP_006774845.1| - 0.00051 19.1 0.0 0.00073 18.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) Methyltransf_5 PF01795.14 gi|407463963|ref|YP_006774845.1| - 0.0013 18.0 0.1 0.0062 15.8 0.0 1.8 2 0 0 2 2 2 1 MraW methylase family PCMT PF01135.14 gi|407463963|ref|YP_006774845.1| - 0.0017 17.9 0.0 0.0043 16.6 0.0 1.5 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DOT1 PF08123.8 gi|407463963|ref|YP_006774845.1| - 0.02 14.2 0.1 0.06 12.6 0.0 1.9 2 0 0 2 2 2 0 Histone methylation protein DOT1 GidB PF02527.10 gi|407463963|ref|YP_006774845.1| - 0.023 13.8 0.1 0.041 13.0 0.0 1.4 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G ADH_zinc_N PF00107.21 gi|407463963|ref|YP_006774845.1| - 0.038 13.5 0.0 0.25 10.8 0.0 2.3 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DNA_pol_B_3 PF08408.5 gi|407463963|ref|YP_006774845.1| - 0.058 13.2 0.4 0.12 12.1 0.3 1.6 1 0 0 1 1 1 0 DNA polymerase family B viral insert UPF0020 PF01170.13 gi|407463963|ref|YP_006774845.1| - 0.059 12.9 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 TrkA_N PF02254.13 gi|407463963|ref|YP_006774845.1| - 0.14 12.1 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain DUF98 PF01947.11 gi|407463964|ref|YP_006774846.1| - 0.036 13.8 0.1 0.079 12.7 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF98) MscL PF01741.13 gi|407463965|ref|YP_006774847.1| - 0.12 12.5 2.3 11 6.1 0.0 2.3 2 0 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL NfeD PF01957.13 gi|407463965|ref|YP_006774847.1| - 0.66 10.0 9.4 0.61 10.2 0.2 2.5 2 1 0 2 2 2 0 NfeD-like C-terminal, partner-binding NdhM PF10664.4 gi|407463966|ref|YP_006774848.1| - 0.075 12.9 0.0 0.08 12.8 0.0 1.1 1 0 0 1 1 1 0 Cyanobacterial and plastid NDH-1 subunit M AMP-binding_C_2 PF14535.1 gi|407463966|ref|YP_006774848.1| - 0.082 12.9 0.1 0.088 12.8 0.0 1.2 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain bact-PGI_C PF10432.4 gi|407463970|ref|YP_006774852.1| - 2e-36 124.9 0.0 4.2e-36 123.9 0.0 1.5 2 0 0 2 2 2 1 Bacterial phospho-glucose isomerase C-terminal region SIS PF01380.17 gi|407463970|ref|YP_006774852.1| - 2.1e-06 27.3 0.1 4.7e-06 26.2 0.0 1.6 1 0 0 1 1 1 1 SIS domain Response_reg PF00072.19 gi|407463971|ref|YP_006774853.1| - 6.4e-09 35.8 0.0 6.8e-09 35.7 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain MTBP_N PF14918.1 gi|407463971|ref|YP_006774853.1| - 0.046 13.1 0.0 0.049 13.0 0.0 1.1 1 0 0 1 1 1 0 MDM2-binding DNApol3-delta_C PF09115.5 gi|407463973|ref|YP_006774855.1| - 0.063 13.3 0.3 1.9 8.5 0.0 2.0 1 1 1 2 2 2 0 DNA polymerase III, delta subunit, C terminal Glycos_transf_1 PF00534.15 gi|407463974|ref|YP_006774856.1| - 1.7e-40 138.2 0.4 5.1e-40 136.6 0.2 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|407463974|ref|YP_006774856.1| - 1.7e-17 63.8 0.0 3.4e-17 62.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|407463974|ref|YP_006774856.1| - 1.8e-15 57.1 0.0 3.5e-15 56.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|407463974|ref|YP_006774856.1| - 1.8e-13 50.9 0.0 2.3e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|407463974|ref|YP_006774856.1| - 2.2e-11 43.7 0.1 4.4e-11 42.7 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|407463974|ref|YP_006774856.1| - 1.2e-06 28.6 0.0 2.7e-06 27.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Guanylate_cyc PF00211.15 gi|407463975|ref|YP_006774857.1| - 9.7e-14 51.1 0.1 1.3e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Guanylate_cyc PF00211.15 gi|407463976|ref|YP_006774858.1| - 8.2e-06 25.3 0.0 1.3e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Ribophorin_I PF04597.9 gi|407463976|ref|YP_006774858.1| - 0.0045 15.5 0.1 0.01 14.4 0.0 1.5 2 0 0 2 2 2 1 Ribophorin I Peripla_BP_5 PF13433.1 gi|407463976|ref|YP_006774858.1| - 0.048 12.3 0.0 0.077 11.7 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein domain Tyrosinase PF00264.15 gi|407463977|ref|YP_006774859.1| - 4e-45 154.6 0.7 7.2e-45 153.8 0.5 1.4 1 0 0 1 1 1 1 Common central domain of tyrosinase HTH_45 PF14947.1 gi|407463978|ref|YP_006774860.1| - 9.3e-05 22.1 0.3 0.00023 20.9 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4423 PF14394.1 gi|407463978|ref|YP_006774860.1| - 0.00011 21.8 0.1 0.00024 20.7 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_24 PF13412.1 gi|407463978|ref|YP_006774860.1| - 0.0032 16.8 0.8 0.0067 15.7 0.5 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|407463978|ref|YP_006774860.1| - 0.054 13.3 0.1 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_34 PF13601.1 gi|407463978|ref|YP_006774860.1| - 0.054 13.5 0.3 0.14 12.2 0.1 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_27 PF13463.1 gi|407463978|ref|YP_006774860.1| - 0.073 13.4 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain Reprolysin_3 PF13582.1 gi|407463980|ref|YP_006774862.1| - 3.7e-05 24.2 0.1 6.7e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin PF01421.14 gi|407463980|ref|YP_006774862.1| - 0.00093 18.8 0.0 0.0015 18.1 0.0 1.2 1 0 0 1 1 1 1 Reprolysin (M12B) family zinc metalloprotease Reprolysin_5 PF13688.1 gi|407463980|ref|YP_006774862.1| - 0.001 19.0 0.0 0.0015 18.5 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 Peptidase_M66 PF10462.4 gi|407463980|ref|YP_006774862.1| - 0.0076 15.1 2.0 0.012 14.5 1.4 1.2 1 0 0 1 1 1 1 Peptidase M66 Peptidase_M11 PF05548.6 gi|407463980|ref|YP_006774862.1| - 0.017 14.0 0.0 0.025 13.5 0.0 1.2 1 0 0 1 1 1 0 Gametolysin peptidase M11 Astacin PF01400.19 gi|407463980|ref|YP_006774862.1| - 0.029 13.7 0.0 0.06 12.7 0.0 1.5 1 0 0 1 1 1 0 Astacin (Peptidase family M12A) Peptidase_M43 PF05572.8 gi|407463980|ref|YP_006774862.1| - 0.044 13.3 0.1 0.086 12.4 0.0 1.5 1 0 0 1 1 1 0 Pregnancy-associated plasma protein-A Reprolysin_2 PF13574.1 gi|407463980|ref|YP_006774862.1| - 0.045 13.8 0.1 0.1 12.6 0.1 1.6 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_4 PF13583.1 gi|407463980|ref|YP_006774862.1| - 0.091 12.2 0.2 0.16 11.4 0.1 1.4 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.3 gi|407463980|ref|YP_006774862.1| - 0.18 10.2 0.2 0.3 9.4 0.1 1.2 1 0 0 1 1 1 0 Putative peptidase family GFA PF04828.9 gi|407463981|ref|YP_006774863.1| - 0.092 12.7 0.3 0.092 12.7 0.2 1.0 1 0 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme DUF2433 PF10360.4 gi|407463982|ref|YP_006774864.1| - 0.22 11.8 3.4 0.16 12.2 1.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2433) Oxidored-like PF09791.4 gi|407463982|ref|YP_006774864.1| - 0.46 9.9 1.8 2.4 7.6 0.5 2.4 2 0 0 2 2 2 0 Oxidoreductase-like protein, N-terminal APG17 PF04108.7 gi|407463983|ref|YP_006774865.1| - 0.04 12.7 0.5 0.041 12.6 0.4 1.0 1 0 0 1 1 1 0 Autophagy protein Apg17 DUF1706 PF08020.6 gi|407463983|ref|YP_006774865.1| - 0.057 12.9 0.6 0.062 12.7 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1706) DUF2659 PF10858.3 gi|407463983|ref|YP_006774865.1| - 0.058 12.7 0.8 0.082 12.3 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2659) Prefoldin_2 PF01920.15 gi|407463983|ref|YP_006774865.1| - 0.098 12.4 1.4 0.12 12.2 0.7 1.4 1 1 0 1 1 1 0 Prefoldin subunit UbiA PF01040.13 gi|407463984|ref|YP_006774866.1| - 2.3e-23 82.7 22.6 3.1e-23 82.3 15.6 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family AsnC_trans_reg PF01037.16 gi|407463985|ref|YP_006774867.1| - 3.7e-13 48.9 0.1 4.4e-13 48.7 0.1 1.1 1 0 0 1 1 1 1 AsnC family Semialdhyde_dhC PF02774.13 gi|407463986|ref|YP_006774868.1| - 1.2e-31 109.9 0.0 2.1e-31 109.1 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.19 gi|407463986|ref|YP_006774868.1| - 2.4e-30 105.3 0.1 5.8e-30 104.0 0.1 1.6 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|407463986|ref|YP_006774868.1| - 0.0072 16.2 0.0 0.016 15.0 0.0 1.7 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.17 gi|407463986|ref|YP_006774868.1| - 0.0091 16.5 0.0 0.015 15.8 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Gp_dh_C PF02800.15 gi|407463986|ref|YP_006774868.1| - 0.049 13.0 0.1 5.3 6.4 0.0 2.8 3 0 0 3 3 3 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Aminotran_1_2 PF00155.16 gi|407463988|ref|YP_006774870.1| - 2.5e-49 168.1 0.1 2.7e-49 168.0 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II CSTF2_hinge PF14327.1 gi|407463988|ref|YP_006774870.1| - 0.58 10.2 5.6 2 8.5 0.2 2.7 3 0 0 3 3 3 0 Hinge domain of cleavage stimulation factor subunit 2 CbiA PF01656.18 gi|407463989|ref|YP_006774871.1| - 4.7e-27 94.6 0.1 6e-27 94.3 0.1 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|407463989|ref|YP_006774871.1| - 7.3e-18 64.8 0.1 5.2e-17 62.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|407463989|ref|YP_006774871.1| - 1.5e-05 24.7 0.1 0.0018 17.9 0.0 2.6 1 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.1 gi|407463989|ref|YP_006774871.1| - 0.00068 20.0 0.6 0.0023 18.2 0.4 1.7 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|407463989|ref|YP_006774871.1| - 0.0011 18.4 0.8 0.28 10.5 0.1 2.3 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain AAA_30 PF13604.1 gi|407463989|ref|YP_006774871.1| - 0.0086 15.6 0.1 0.5 9.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain cobW PF02492.14 gi|407463989|ref|YP_006774871.1| - 0.0086 15.5 0.0 0.93 8.9 0.0 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_17 PF13207.1 gi|407463989|ref|YP_006774871.1| - 0.017 15.9 0.5 0.16 12.7 0.1 2.5 2 1 0 2 2 2 0 AAA domain NTPase_1 PF03266.10 gi|407463989|ref|YP_006774871.1| - 0.034 13.8 0.1 0.18 11.4 0.0 2.1 2 0 0 2 2 2 0 NTPase VirC1 PF07015.6 gi|407463989|ref|YP_006774871.1| - 0.037 13.0 0.2 0.081 11.9 0.0 1.7 2 0 0 2 2 2 0 VirC1 protein ABC_tran PF00005.22 gi|407463989|ref|YP_006774871.1| - 0.051 13.8 0.0 0.12 12.6 0.0 1.8 2 0 0 2 2 2 0 ABC transporter Miro PF08477.8 gi|407463989|ref|YP_006774871.1| - 0.051 14.0 0.1 10 6.6 0.0 2.5 2 0 0 2 2 2 0 Miro-like protein AAA_29 PF13555.1 gi|407463989|ref|YP_006774871.1| - 0.1 12.1 0.1 0.19 11.2 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain CobD_Cbib PF03186.8 gi|407463990|ref|YP_006774872.1| - 6.6e-96 320.8 0.2 7.9e-96 320.5 0.1 1.1 1 0 0 1 1 1 1 CobD/Cbib protein DUF1700 PF08006.6 gi|407463990|ref|YP_006774872.1| - 0.24 10.6 9.7 1.3 8.2 3.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) SP_C-Propep PF08999.5 gi|407463990|ref|YP_006774872.1| - 0.57 9.6 7.3 0.29 10.6 3.2 1.9 1 1 1 2 2 2 0 Surfactant protein C, N terminal propeptide CobS PF02654.10 gi|407463991|ref|YP_006774873.1| - 3.1e-53 180.7 19.8 3.5e-53 180.6 13.7 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase E1-E2_ATPase PF00122.15 gi|407463991|ref|YP_006774873.1| - 7.8 5.4 10.5 0.69 8.9 2.4 2.1 2 0 0 2 2 2 0 E1-E2 ATPase NTP_transf_3 PF12804.2 gi|407463992|ref|YP_006774874.1| - 3.7e-15 56.3 0.0 4.3e-15 56.1 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|407463992|ref|YP_006774874.1| - 6.2e-07 29.1 0.0 8.1e-07 28.7 0.0 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.18 gi|407463992|ref|YP_006774874.1| - 0.00098 18.4 0.0 0.0099 15.1 0.0 2.0 2 0 0 2 2 2 1 Nucleotidyl transferase CTP_transf_3 PF02348.14 gi|407463992|ref|YP_006774874.1| - 0.013 15.1 0.1 0.032 13.8 0.0 1.6 1 1 0 1 1 1 0 Cytidylyltransferase MinE PF03776.9 gi|407463992|ref|YP_006774874.1| - 0.12 11.8 0.8 2 7.9 0.1 2.4 2 0 0 2 2 2 0 Septum formation topological specificity factor MinE Mic1 PF07035.7 gi|407463992|ref|YP_006774874.1| - 0.13 11.6 0.4 0.54 9.6 0.1 2.2 2 1 0 2 2 2 0 Colon cancer-associated protein Mic1-like Ribosomal_S27e PF01667.12 gi|407463993|ref|YP_006774875.1| - 2.3e-18 65.4 0.8 2.8e-18 65.1 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 Zn_Tnp_IS91 PF14319.1 gi|407463993|ref|YP_006774875.1| - 0.0034 16.8 0.9 0.0039 16.6 0.6 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain ZZ PF00569.12 gi|407463993|ref|YP_006774875.1| - 0.0045 16.5 1.9 1.1 8.9 0.1 2.2 2 0 0 2 2 2 2 Zinc finger, ZZ type zinc_ribbon_6 PF14599.1 gi|407463993|ref|YP_006774875.1| - 0.0072 16.0 2.3 0.073 12.8 1.6 2.0 1 1 0 1 1 1 1 Zinc-ribbon zf-BED PF02892.10 gi|407463993|ref|YP_006774875.1| - 0.0096 15.6 2.5 0.75 9.6 0.1 2.1 1 1 1 2 2 2 1 BED zinc finger zf-C2H2_7 PF15269.1 gi|407463993|ref|YP_006774875.1| - 0.014 15.2 0.5 0.017 14.9 0.4 1.1 1 0 0 1 1 1 0 Zinc-finger TF_Zn_Ribbon PF08271.7 gi|407463993|ref|YP_006774875.1| - 0.016 14.5 0.4 0.022 14.0 0.3 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding DZR PF12773.2 gi|407463993|ref|YP_006774875.1| - 0.026 14.3 2.1 0.049 13.4 1.4 1.5 1 1 0 1 1 1 0 Double zinc ribbon YhfH PF14149.1 gi|407463993|ref|YP_006774875.1| - 0.027 14.2 1.2 2.5 7.9 0.1 2.2 2 0 0 2 2 2 0 YhfH-like protein RNA_POL_M_15KD PF02150.11 gi|407463993|ref|YP_006774875.1| - 0.034 13.8 0.9 0.051 13.2 0.6 1.3 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit zf-dskA_traR PF01258.12 gi|407463993|ref|YP_006774875.1| - 0.041 13.6 0.5 6.6 6.5 0.1 2.2 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger Stc1 PF12898.2 gi|407463993|ref|YP_006774875.1| - 0.055 13.5 0.6 0.059 13.4 0.4 1.1 1 0 0 1 1 1 0 Stc1 domain zf-CHY PF05495.7 gi|407463993|ref|YP_006774875.1| - 0.058 13.5 1.4 0.073 13.2 0.9 1.2 1 0 0 1 1 1 0 CHY zinc finger Lar_restr_allev PF14354.1 gi|407463993|ref|YP_006774875.1| - 0.065 13.5 1.5 0.68 10.2 1.0 2.0 1 1 0 1 1 1 0 Restriction alleviation protein Lar OrfB_Zn_ribbon PF07282.6 gi|407463993|ref|YP_006774875.1| - 0.068 12.8 0.6 0.076 12.6 0.4 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-UDP PF14569.1 gi|407463993|ref|YP_006774875.1| - 0.072 12.8 0.2 0.083 12.6 0.1 1.1 1 0 0 1 1 1 0 Zinc-binding RING-finger DUF4206 PF13901.1 gi|407463993|ref|YP_006774875.1| - 0.076 12.5 0.6 0.079 12.5 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4206) Zn-ribbon_8 PF09723.5 gi|407463993|ref|YP_006774875.1| - 0.079 12.9 1.0 0.17 11.8 0.6 1.6 1 1 0 1 1 1 0 Zinc ribbon domain HypA PF01155.14 gi|407463993|ref|YP_006774875.1| - 0.085 12.5 0.4 0.11 12.1 0.3 1.3 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Zn_Tnp_IS1595 PF12760.2 gi|407463993|ref|YP_006774875.1| - 0.11 12.3 1.0 0.15 11.9 0.7 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|407463993|ref|YP_006774875.1| - 0.11 12.0 2.3 8.2 6.0 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|407463993|ref|YP_006774875.1| - 0.17 11.1 4.3 2 7.7 3.0 2.1 1 1 1 2 2 2 0 zinc-ribbon domain C1_1 PF00130.17 gi|407463993|ref|YP_006774875.1| - 0.19 11.5 1.6 0.32 10.7 1.2 1.3 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Elf1 PF05129.8 gi|407463993|ref|YP_006774875.1| - 0.2 11.4 2.2 0.29 10.8 1.5 1.4 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zf-HYPF PF07503.7 gi|407463993|ref|YP_006774875.1| - 0.21 11.0 3.6 7 6.1 0.1 2.2 2 0 0 2 2 2 0 HypF finger DUF2318 PF10080.4 gi|407463993|ref|YP_006774875.1| - 0.21 11.3 1.8 0.28 10.9 1.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2318) DNA_RNApol_7kD PF03604.8 gi|407463993|ref|YP_006774875.1| - 0.22 11.0 4.6 4.5 6.8 0.4 2.2 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit DUF3133 PF11331.3 gi|407463993|ref|YP_006774875.1| - 0.35 10.4 2.8 9.8 5.8 0.2 2.2 1 1 2 3 3 3 0 Protein of unknown function (DUF3133) zf-LSD1 PF06943.7 gi|407463993|ref|YP_006774875.1| - 0.4 10.3 1.7 0.47 10.1 0.0 1.8 2 0 0 2 2 2 0 LSD1 zinc finger Prok-RING_1 PF14446.1 gi|407463993|ref|YP_006774875.1| - 0.91 9.3 3.5 16 5.2 2.7 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zf-C2H2_3 PF13878.1 gi|407463993|ref|YP_006774875.1| - 1.5 8.4 5.8 3.1 7.4 0.5 2.2 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO RRN7 PF11781.3 gi|407463993|ref|YP_006774875.1| - 1.8 8.1 4.1 19 4.8 0.2 2.1 1 1 1 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 Ribosomal_L44 PF00935.14 gi|407463994|ref|YP_006774876.1| - 6.5e-26 90.1 10.0 6.5e-26 90.1 6.9 1.6 1 1 1 2 2 2 1 Ribosomal protein L44 C1_1 PF00130.17 gi|407463994|ref|YP_006774876.1| - 0.097 12.4 0.8 2.3 7.9 0.0 2.1 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Rdx PF10262.4 gi|407463994|ref|YP_006774876.1| - 0.33 11.0 0.3 0.33 11.0 0.2 1.6 2 0 0 2 2 2 0 Rdx family Tnp_zf-ribbon_2 PF13842.1 gi|407463994|ref|YP_006774876.1| - 5.4 7.5 9.2 10 6.6 2.3 2.4 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon Adenine_deam_C PF13382.1 gi|407463995|ref|YP_006774877.1| - 2.8e-46 156.8 0.1 5.8e-46 155.7 0.0 1.6 2 0 0 2 2 2 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.15 gi|407463995|ref|YP_006774877.1| - 4.8e-18 65.9 0.0 5.9e-08 32.7 0.0 2.2 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_5 PF13594.1 gi|407463995|ref|YP_006774877.1| - 1.9e-09 37.1 0.0 7.5e-09 35.2 0.0 2.1 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|407463995|ref|YP_006774877.1| - 0.00012 22.1 0.0 0.29 11.1 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_3 PF07969.6 gi|407463995|ref|YP_006774877.1| - 0.0022 17.2 0.0 0.45 9.6 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family Cpn60_TCP1 PF00118.19 gi|407463996|ref|YP_006774878.1| - 5.3e-165 549.7 16.5 6.3e-165 549.4 11.4 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family ROK PF00480.15 gi|407463997|ref|YP_006774879.1| - 7.1e-48 162.8 0.4 9e-48 162.4 0.3 1.1 1 0 0 1 1 1 1 ROK family BcrAD_BadFG PF01869.15 gi|407463997|ref|YP_006774879.1| - 2.4e-05 23.7 0.0 4.8e-05 22.7 0.0 1.4 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Hydant_A_N PF05378.8 gi|407463997|ref|YP_006774879.1| - 0.00043 19.8 0.0 0.00061 19.3 0.0 1.3 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region FGGY_N PF00370.16 gi|407463997|ref|YP_006774879.1| - 0.071 12.4 0.0 0.13 11.5 0.0 1.5 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain DUF2024 PF09630.5 gi|407463998|ref|YP_006774880.1| - 2.3e-35 120.1 2.3 2.5e-35 120.0 1.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2024) GATase PF00117.23 gi|407464000|ref|YP_006774882.1| - 1e-41 142.5 0.0 1.5e-41 142.0 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GMP_synt_C PF00958.17 gi|407464000|ref|YP_006774882.1| - 5e-32 109.4 0.0 1.3e-31 108.1 0.0 1.7 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.12 gi|407464000|ref|YP_006774882.1| - 9.8e-11 41.0 0.6 3.3e-05 22.8 0.0 2.2 2 0 0 2 2 2 2 NAD synthase Peptidase_C26 PF07722.8 gi|407464000|ref|YP_006774882.1| - 7.2e-08 32.1 0.0 3e-07 30.1 0.0 2.1 1 1 0 1 1 1 1 Peptidase C26 Asn_synthase PF00733.16 gi|407464000|ref|YP_006774882.1| - 3.3e-05 23.5 0.0 8.7e-05 22.1 0.0 1.6 2 0 0 2 2 2 1 Asparagine synthase tRNA_Me_trans PF03054.11 gi|407464000|ref|YP_006774882.1| - 0.00038 19.1 0.0 0.0077 14.8 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase ThiI PF02568.9 gi|407464000|ref|YP_006774882.1| - 0.00057 19.4 0.0 0.032 13.6 0.0 2.3 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.8 gi|407464000|ref|YP_006774882.1| - 0.0025 17.1 0.0 0.1 11.8 0.0 2.3 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC PAPS_reduct PF01507.14 gi|407464000|ref|YP_006774882.1| - 0.062 13.1 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.15 gi|407464000|ref|YP_006774882.1| - 0.093 12.2 0.0 0.23 10.9 0.0 1.6 2 0 0 2 2 2 0 PP-loop family Proteasome PF00227.21 gi|407464000|ref|YP_006774882.1| - 0.14 11.4 0.2 0.38 10.0 0.0 1.7 2 0 0 2 2 2 0 Proteasome subunit IATP PF04568.7 gi|407464001|ref|YP_006774883.1| - 0.013 15.5 1.5 0.024 14.6 1.0 1.5 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP Lipid_bd PF12888.2 gi|407464001|ref|YP_006774883.1| - 0.12 12.1 0.2 6.9 6.5 0.0 2.3 1 1 1 2 2 2 0 Lipid-binding putative hydrolase MAF_flag10 PF01973.13 gi|407464002|ref|YP_006774884.1| - 7.3e-40 136.2 0.7 1e-39 135.7 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF115 SBDS PF01172.13 gi|407464002|ref|YP_006774884.1| - 0.02 14.6 0.1 2.5 7.9 0.0 2.5 2 0 0 2 2 2 0 Shwachman-Bodian-Diamond syndrome (SBDS) protein Pterin_bind PF00809.17 gi|407464003|ref|YP_006774885.1| - 2.1e-38 131.8 0.2 5.3e-38 130.5 0.2 1.6 1 1 0 1 1 1 1 Pterin binding enzyme IMPDH PF00478.20 gi|407464004|ref|YP_006774886.1| - 3e-134 447.3 7.1 3.5e-134 447.1 4.9 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.23 gi|407464004|ref|YP_006774886.1| - 4.4e-24 83.9 0.9 2.8e-11 42.9 0.0 2.8 2 0 0 2 2 2 2 CBS domain NMO PF03060.10 gi|407464004|ref|YP_006774886.1| - 5.4e-09 35.6 10.5 0.00011 21.4 4.9 2.4 2 1 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.13 gi|407464004|ref|YP_006774886.1| - 2.2e-07 30.0 5.4 3.5e-07 29.4 3.1 1.7 1 1 0 1 1 1 1 FMN-dependent dehydrogenase His_biosynth PF00977.16 gi|407464004|ref|YP_006774886.1| - 1.6e-06 27.5 1.2 0.018 14.3 0.0 2.5 1 1 1 2 2 2 2 Histidine biosynthesis protein DHO_dh PF01180.16 gi|407464004|ref|YP_006774886.1| - 0.00019 20.4 6.1 0.00045 19.2 0.8 2.4 1 1 1 2 2 2 1 Dihydroorotate dehydrogenase NanE PF04131.9 gi|407464004|ref|YP_006774886.1| - 0.0023 16.9 2.3 0.0099 14.8 1.6 2.1 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase PcrB PF01884.12 gi|407464004|ref|YP_006774886.1| - 0.0056 15.9 9.7 0.35 10.0 0.3 4.0 2 1 1 4 4 4 2 PcrB family PEP_mutase PF13714.1 gi|407464004|ref|YP_006774886.1| - 0.036 13.2 1.4 0.091 11.9 0.1 2.2 3 0 0 3 3 3 0 Phosphoenolpyruvate phosphomutase B12-binding PF02310.14 gi|407464004|ref|YP_006774886.1| - 0.046 13.6 0.3 0.1 12.4 0.2 1.5 1 0 0 1 1 1 0 B12 binding domain ThiG PF05690.9 gi|407464004|ref|YP_006774886.1| - 0.088 11.8 2.9 0.1 11.6 0.7 2.1 1 1 0 1 1 1 0 Thiazole biosynthesis protein ThiG PRC PF05239.11 gi|407464004|ref|YP_006774886.1| - 0.42 10.5 2.7 1.5 8.7 0.3 2.9 2 1 1 3 3 3 0 PRC-barrel domain PetM PF08041.6 gi|407464005|ref|YP_006774887.1| - 0.02 14.3 0.3 0.02 14.3 0.2 2.1 3 0 0 3 3 3 0 PetM family of cytochrome b6f complex subunit 7 PDT PF00800.13 gi|407464006|ref|YP_006774888.1| - 1.9e-58 197.0 0.4 2.3e-58 196.7 0.3 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.20 gi|407464006|ref|YP_006774888.1| - 0.00011 21.6 0.0 0.00019 20.8 0.0 1.4 1 0 0 1 1 1 1 ACT domain ECR1_N PF14382.1 gi|407464007|ref|YP_006774889.1| - 1.1e-05 24.6 0.0 0.00012 21.2 0.0 2.3 2 0 0 2 2 2 1 Exosome complex exonuclease RRP4 N-terminal region Prok-RING_1 PF14446.1 gi|407464007|ref|YP_006774889.1| - 0.0044 16.7 1.7 0.0092 15.6 1.2 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 EXOSC1 PF10447.4 gi|407464007|ref|YP_006774889.1| - 0.021 14.7 0.5 1.1 9.3 0.1 2.7 2 1 0 2 2 2 0 Exosome component EXOSC1/CSL4 DUF35_N PF12172.3 gi|407464007|ref|YP_006774889.1| - 0.23 11.4 1.3 0.68 9.9 0.9 1.7 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) ADH_zinc_N PF00107.21 gi|407464008|ref|YP_006774890.1| - 4.9e-30 103.7 0.1 1.6e-29 102.0 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.7 gi|407464008|ref|YP_006774890.1| - 1.5e-25 89.0 0.2 2.4e-25 88.4 0.2 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.1 gi|407464008|ref|YP_006774890.1| - 1e-14 55.5 0.0 1.7e-14 54.7 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF773 PF05600.7 gi|407464008|ref|YP_006774890.1| - 0.13 11.0 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF773) TPR_11 PF13414.1 gi|407464009|ref|YP_006774891.1| - 4.8e-29 99.8 8.8 8.8e-14 50.9 0.4 3.4 2 1 2 4 4 4 4 TPR repeat TPR_1 PF00515.23 gi|407464009|ref|YP_006774891.1| - 2.2e-24 83.9 1.4 3.6e-09 35.8 0.1 5.1 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407464009|ref|YP_006774891.1| - 1e-21 75.0 0.1 1.3e-06 27.8 0.1 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407464009|ref|YP_006774891.1| - 7.5e-20 71.0 0.0 2.8e-07 31.0 0.1 3.2 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407464009|ref|YP_006774891.1| - 1.8e-14 53.3 0.2 5.7e-07 29.3 0.2 3.5 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407464009|ref|YP_006774891.1| - 2.6e-14 53.2 0.0 4.1e-06 27.0 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407464009|ref|YP_006774891.1| - 4.2e-14 51.1 3.6 2.1e-05 23.9 0.3 4.9 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407464009|ref|YP_006774891.1| - 1.4e-12 47.0 0.0 0.012 16.1 0.0 5.0 2 1 3 5 5 5 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|407464009|ref|YP_006774891.1| - 4.5e-12 45.5 0.0 0.58 10.7 0.0 5.2 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|407464009|ref|YP_006774891.1| - 1.1e-10 40.5 0.2 0.0006 19.4 0.1 5.0 4 1 1 5 5 5 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|407464009|ref|YP_006774891.1| - 2.2e-10 40.2 0.3 0.0004 20.2 0.0 4.2 4 0 0 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat Apc3 PF12895.2 gi|407464009|ref|YP_006774891.1| - 7.3e-10 38.8 1.4 0.001 19.1 0.1 2.3 2 0 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.1 gi|407464009|ref|YP_006774891.1| - 3e-08 33.3 0.0 0.011 15.6 0.0 4.8 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407464009|ref|YP_006774891.1| - 6.9e-08 32.0 8.4 0.001 19.1 0.3 4.6 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_9 PF13371.1 gi|407464009|ref|YP_006774891.1| - 1.1e-06 28.3 0.0 6.3e-05 22.7 0.0 2.7 3 1 0 3 3 3 1 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|407464009|ref|YP_006774891.1| - 0.00098 18.3 0.2 0.084 12.0 0.0 2.1 1 1 0 2 2 2 1 Coatomer epsilon subunit PPR PF01535.15 gi|407464009|ref|YP_006774891.1| - 0.0064 16.4 0.4 12 6.1 0.0 4.4 5 0 0 5 5 5 0 PPR repeat TPR_5 PF12688.2 gi|407464009|ref|YP_006774891.1| - 0.0072 16.3 0.0 1.8 8.6 0.0 2.6 2 1 0 2 2 2 1 Tetratrico peptide repeat MIT PF04212.13 gi|407464009|ref|YP_006774891.1| - 0.057 13.2 1.8 2.1 8.2 0.1 3.3 4 0 0 4 4 4 0 MIT (microtubule interacting and transport) domain ChAPs PF09295.5 gi|407464009|ref|YP_006774891.1| - 0.095 11.4 0.0 0.12 11.1 0.0 1.2 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) Diphthamide_syn PF01866.12 gi|407464010|ref|YP_006774892.1| - 1.2e-77 261.1 0.0 1.5e-77 260.9 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein Fe-ADH_2 PF13685.1 gi|407464010|ref|YP_006774892.1| - 0.26 10.5 2.3 0.27 10.5 0.2 2.0 3 0 0 3 3 3 0 Iron-containing alcohol dehydrogenase DUF1743 PF08489.6 gi|407464011|ref|YP_006774893.1| - 1.1e-33 115.4 0.0 5.2e-33 113.3 0.0 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF1743) C1_1 PF00130.17 gi|407464011|ref|YP_006774893.1| - 0.02 14.6 2.4 0.034 13.8 1.7 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) tRNA_anti_2 PF13742.1 gi|407464011|ref|YP_006774893.1| - 0.024 14.4 0.0 0.048 13.5 0.0 1.5 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Elf1 PF05129.8 gi|407464011|ref|YP_006774893.1| - 0.15 11.7 5.8 0.71 9.6 4.1 2.1 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zinc_ribbon_2 PF13240.1 gi|407464011|ref|YP_006774893.1| - 1.2 8.6 5.9 2.8 7.5 4.1 1.6 1 0 0 1 1 1 0 zinc-ribbon domain GSDH PF07995.6 gi|407464012|ref|YP_006774894.1| - 1.3e-84 284.1 0.0 1.7e-84 283.7 0.0 1.1 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase NHL PF01436.16 gi|407464012|ref|YP_006774894.1| - 3.5e-06 26.6 0.1 0.028 14.3 0.0 4.1 4 0 0 4 4 4 2 NHL repeat Reg_prop PF07494.6 gi|407464012|ref|YP_006774894.1| - 0.0006 19.5 2.6 16 5.9 0.1 4.8 4 0 0 4 4 4 2 Two component regulator propeller SGL PF08450.7 gi|407464012|ref|YP_006774894.1| - 0.075 12.4 0.0 0.49 9.7 0.0 2.5 1 1 0 1 1 1 0 SMP-30/Gluconolaconase/LRE-like region HMG-CoA_red PF00368.13 gi|407464013|ref|YP_006774895.1| - 2.2e-80 270.1 6.1 2.6e-80 269.8 4.2 1.1 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Death PF00531.17 gi|407464013|ref|YP_006774895.1| - 0.075 12.8 0.1 17 5.2 0.0 3.2 3 0 0 3 3 3 0 Death domain HisG PF01634.13 gi|407464014|ref|YP_006774896.1| - 1.4e-38 132.0 0.0 1.9e-38 131.6 0.0 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.6 gi|407464014|ref|YP_006774896.1| - 1.7e-13 50.2 0.0 4e-13 49.0 0.0 1.6 1 0 0 1 1 1 1 HisG, C-terminal domain Histidinol_dh PF00815.15 gi|407464015|ref|YP_006774897.1| - 6.3e-133 443.3 0.9 7.5e-133 443.1 0.7 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase NBP1 PF08537.5 gi|407464015|ref|YP_006774897.1| - 0.033 13.4 2.5 0.055 12.6 1.7 1.3 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 Aminotran_1_2 PF00155.16 gi|407464016|ref|YP_006774898.1| - 2.3e-44 151.8 0.0 2.7e-44 151.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.8 gi|407464016|ref|YP_006774898.1| - 1.5e-07 30.4 0.0 2.1e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Allinase BRCT PF00533.21 gi|407464016|ref|YP_006774898.1| - 0.03 14.4 0.0 0.086 13.0 0.0 1.7 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain Delta_lysin PF05372.6 gi|407464016|ref|YP_006774898.1| - 0.076 12.3 0.5 65 3.0 0.0 3.9 3 0 0 3 3 3 0 Delta lysin family DUF2232 PF09991.4 gi|407464016|ref|YP_006774898.1| - 0.078 11.9 0.1 0.11 11.4 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2232) Aminotran_5 PF00266.14 gi|407464016|ref|YP_006774898.1| - 0.082 11.6 0.0 0.67 8.6 0.0 1.9 2 0 0 2 2 2 0 Aminotransferase class-V HAD_2 PF13419.1 gi|407464017|ref|YP_006774899.1| - 1.9e-06 28.1 0.1 0.0057 16.8 0.0 2.3 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|407464017|ref|YP_006774899.1| - 0.00011 22.6 0.0 0.00031 21.2 0.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 gi|407464017|ref|YP_006774899.1| - 0.034 14.0 0.0 1.7 8.6 0.0 2.4 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase GerE PF00196.14 gi|407464017|ref|YP_006774899.1| - 0.066 12.5 0.0 0.15 11.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family IGPD PF00475.13 gi|407464018|ref|YP_006774900.1| - 2.9e-49 166.6 1.1 3.8e-49 166.2 0.8 1.2 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase DUF916 PF06030.7 gi|407464018|ref|YP_006774900.1| - 0.079 12.7 0.9 0.45 10.3 0.0 2.5 2 1 0 3 3 3 0 Bacterial protein of unknown function (DUF916) GATase PF00117.23 gi|407464019|ref|YP_006774901.1| - 4.9e-33 114.2 0.0 5.5e-33 114.0 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|407464019|ref|YP_006774901.1| - 0.00057 19.3 0.7 0.015 14.7 0.5 2.7 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.9 gi|407464019|ref|YP_006774901.1| - 0.0088 15.6 0.0 0.014 14.9 0.0 1.5 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain His_biosynth PF00977.16 gi|407464020|ref|YP_006774902.1| - 1.3e-69 233.9 0.1 1.5e-69 233.8 0.1 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein PcrB PF01884.12 gi|407464020|ref|YP_006774902.1| - 0.0016 17.6 0.1 0.16 11.2 0.0 2.1 2 0 0 2 2 2 2 PcrB family IGPS PF00218.16 gi|407464020|ref|YP_006774902.1| - 0.0024 16.9 0.0 0.17 10.8 0.0 2.1 2 0 0 2 2 2 2 Indole-3-glycerol phosphate synthase TMP-TENI PF02581.12 gi|407464020|ref|YP_006774902.1| - 0.0089 15.1 0.3 1.3 8.1 0.0 2.8 2 1 1 3 3 3 1 Thiamine monophosphate synthase/TENI NMO PF03060.10 gi|407464020|ref|YP_006774902.1| - 0.021 13.9 0.0 2.1 7.4 0.0 2.2 2 0 0 2 2 2 0 Nitronate monooxygenase Syd PF07348.7 gi|407464020|ref|YP_006774902.1| - 0.064 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Syd protein (SUKH-2) Ret_tiss PF10044.4 gi|407464020|ref|YP_006774902.1| - 0.12 12.9 0.0 0.3 11.6 0.0 1.7 1 0 0 1 1 1 0 Retinal tissue protein His_biosynth PF00977.16 gi|407464021|ref|YP_006774903.1| - 1.7e-84 282.6 2.6 2e-84 282.4 1.8 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.12 gi|407464021|ref|YP_006774903.1| - 8.1e-08 31.4 0.1 0.00021 20.2 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) PcrB PF01884.12 gi|407464021|ref|YP_006774903.1| - 2.4e-05 23.6 0.5 4.7e-05 22.7 0.1 1.7 2 0 0 2 2 2 1 PcrB family NMO PF03060.10 gi|407464021|ref|YP_006774903.1| - 0.00033 19.8 0.2 0.066 12.3 0.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase DHO_dh PF01180.16 gi|407464021|ref|YP_006774903.1| - 0.00069 18.6 0.1 0.013 14.5 0.0 2.1 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase TMP-TENI PF02581.12 gi|407464021|ref|YP_006774903.1| - 0.0013 17.8 0.1 0.43 9.6 0.0 2.2 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI ThiG PF05690.9 gi|407464021|ref|YP_006774903.1| - 0.002 17.2 0.2 0.99 8.4 0.0 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG IMPDH PF00478.20 gi|407464021|ref|YP_006774903.1| - 0.0072 15.2 1.6 0.051 12.4 0.2 2.1 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Trp_syntA PF00290.15 gi|407464021|ref|YP_006774903.1| - 0.018 13.6 0.0 0.029 12.9 0.0 1.3 1 0 0 1 1 1 0 Tryptophan synthase alpha chain TRI9 PF08195.6 gi|407464021|ref|YP_006774903.1| - 0.11 12.2 0.0 12 5.6 0.0 2.4 2 0 0 2 2 2 0 TRI9 protein PRA-CH PF01502.13 gi|407464022|ref|YP_006774904.1| - 1.5e-33 114.2 0.0 1.9e-33 113.9 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase IncA PF04156.9 gi|407464023|ref|YP_006774905.1| - 0.057 13.0 0.0 0.084 12.4 0.0 1.1 1 0 0 1 1 1 0 IncA protein DUF4097 PF13349.1 gi|407464023|ref|YP_006774905.1| - 0.1 12.1 1.1 0.23 10.9 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4097) PALP PF00291.20 gi|407464024|ref|YP_006774906.1| - 3.4e-63 213.7 0.4 3.9e-63 213.5 0.3 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACP_syn_III_C PF08541.5 gi|407464024|ref|YP_006774906.1| - 0.044 13.7 0.2 0.19 11.7 0.0 2.2 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ThiF PF00899.16 gi|407464025|ref|YP_006774907.1| - 6.9e-46 155.4 1.2 1.5e-45 154.3 0.9 1.6 1 0 0 1 1 1 1 ThiF family MoeZ_MoeB PF05237.8 gi|407464025|ref|YP_006774907.1| - 2.5e-19 68.6 0.0 4.7e-19 67.7 0.0 1.5 1 0 0 1 1 1 1 MoeZ/MoeB domain ThiS PF02597.15 gi|407464025|ref|YP_006774907.1| - 2.1e-09 37.6 0.1 7.7e-09 35.8 0.0 2.0 2 1 0 2 2 2 1 ThiS family Shikimate_DH PF01488.15 gi|407464025|ref|YP_006774907.1| - 0.00017 21.6 0.1 0.0005 20.1 0.1 1.8 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.1 gi|407464025|ref|YP_006774907.1| - 0.07 13.3 0.3 0.19 11.9 0.2 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding F420_oxidored PF03807.12 gi|407464025|ref|YP_006774907.1| - 0.089 13.2 0.2 0.63 10.5 0.1 2.3 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|407464025|ref|YP_006774907.1| - 0.096 11.8 0.1 0.17 11.0 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thioredoxin_3 PF13192.1 gi|407464028|ref|YP_006774910.1| - 6.8e-15 54.6 0.2 7.7e-15 54.4 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|407464028|ref|YP_006774910.1| - 7.6e-10 38.6 0.0 1.1e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.9 gi|407464028|ref|YP_006774910.1| - 0.00083 19.5 0.1 0.00084 19.5 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) KaiB PF07689.7 gi|407464028|ref|YP_006774910.1| - 0.0049 16.2 0.0 0.0065 15.9 0.0 1.3 1 0 0 1 1 1 1 KaiB domain ArsC PF03960.10 gi|407464028|ref|YP_006774910.1| - 0.023 14.7 0.0 0.032 14.3 0.0 1.2 1 0 0 1 1 1 0 ArsC family GST_N_3 PF13417.1 gi|407464028|ref|YP_006774910.1| - 0.083 13.1 0.0 0.098 12.8 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.1 gi|407464028|ref|YP_006774910.1| - 0.12 12.5 0.2 1.4 9.1 0.1 2.0 1 1 0 1 1 1 0 Thioredoxin-like domain YHS PF04945.8 gi|407464029|ref|YP_006774911.1| - 6.6e-17 61.0 0.2 6.9e-17 61.0 0.1 1.0 1 0 0 1 1 1 1 YHS domain Arc_trans_TRASH PF08394.5 gi|407464029|ref|YP_006774911.1| - 0.00058 19.9 0.6 0.00075 19.6 0.4 1.2 1 0 0 1 1 1 1 Archaeal TRASH domain DUF1364 PF07102.7 gi|407464029|ref|YP_006774911.1| - 0.025 14.4 0.0 0.026 14.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) DsbD PF02683.10 gi|407464030|ref|YP_006774912.1| - 1.6e-18 67.0 17.8 1.6e-18 67.0 12.3 1.7 1 1 1 2 2 2 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|407464030|ref|YP_006774912.1| - 3.8e-08 33.3 24.9 6.9e-08 32.4 15.4 2.3 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF2182 PF09948.4 gi|407464030|ref|YP_006774912.1| - 0.0099 15.8 4.4 0.025 14.5 3.1 1.7 1 1 0 1 1 1 1 Predicted metal-binding integral membrane protein (DUF2182) DUF2157 PF09925.4 gi|407464030|ref|YP_006774912.1| - 0.026 14.1 0.7 0.026 14.1 0.5 3.0 2 1 0 3 3 3 0 Predicted membrane protein (DUF2157) DUF872 PF05915.7 gi|407464030|ref|YP_006774912.1| - 0.9 9.4 15.5 0.24 11.2 1.8 3.2 2 1 1 3 3 3 0 Eukaryotic protein of unknown function (DUF872) DUF2723 PF11028.3 gi|407464030|ref|YP_006774912.1| - 5 6.5 9.1 0.63 9.5 1.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2723) E1-E2_ATPase PF00122.15 gi|407464030|ref|YP_006774912.1| - 8.2 5.3 9.7 2.3 7.2 3.0 2.3 1 1 1 2 2 2 0 E1-E2 ATPase DUF1106 PF06523.6 gi|407464031|ref|YP_006774913.1| - 0.13 12.0 0.2 0.19 11.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1106) YpzG PF14139.1 gi|407464032|ref|YP_006774914.1| - 0.11 12.4 0.2 0.22 11.4 0.1 1.5 1 0 0 1 1 1 0 YpzG-like protein Radical_SAM PF04055.16 gi|407464033|ref|YP_006774915.1| - 1.8e-15 57.4 0.3 5.6e-15 55.8 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily IMPDH PF00478.20 gi|407464033|ref|YP_006774915.1| - 0.058 12.2 0.1 0.081 11.8 0.1 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain HTH_5 PF01022.15 gi|407464034|ref|YP_006774916.1| - 4.8e-09 35.7 0.1 1e-08 34.7 0.0 1.5 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|407464034|ref|YP_006774916.1| - 1.7e-06 27.7 0.0 2.3e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|407464034|ref|YP_006774916.1| - 7.3e-06 25.2 0.4 1e-05 24.8 0.3 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding B-block_TFIIIC PF04182.7 gi|407464034|ref|YP_006774916.1| - 0.00016 21.4 0.1 0.00021 21.0 0.1 1.1 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC TrmB PF01978.14 gi|407464034|ref|YP_006774916.1| - 0.00027 20.5 0.0 0.0004 20.0 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 gi|407464034|ref|YP_006774916.1| - 0.0012 18.4 0.0 0.0018 17.8 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_45 PF14947.1 gi|407464034|ref|YP_006774916.1| - 0.0024 17.6 0.6 0.0039 16.9 0.4 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.1 gi|407464034|ref|YP_006774916.1| - 0.0032 17.4 0.1 0.0054 16.7 0.0 1.4 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_12 PF08461.5 gi|407464034|ref|YP_006774916.1| - 0.0047 16.6 0.1 0.0074 15.9 0.1 1.3 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain DUF4423 PF14394.1 gi|407464034|ref|YP_006774916.1| - 0.0057 16.2 0.2 0.019 14.4 0.1 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_Crp_2 PF13545.1 gi|407464034|ref|YP_006774916.1| - 0.0071 16.1 0.0 0.13 12.0 0.0 2.1 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.2 gi|407464034|ref|YP_006774916.1| - 0.022 14.4 0.0 0.027 14.1 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_10 PF04967.7 gi|407464034|ref|YP_006774916.1| - 0.023 14.2 0.0 0.04 13.4 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain FaeA PF04703.7 gi|407464034|ref|YP_006774916.1| - 0.024 14.7 0.0 0.039 14.0 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein HTH_28 PF13518.1 gi|407464034|ref|YP_006774916.1| - 0.058 13.4 0.0 0.22 11.5 0.0 1.8 1 1 1 2 2 2 0 Helix-turn-helix domain MarR PF01047.17 gi|407464034|ref|YP_006774916.1| - 0.067 12.9 0.0 0.098 12.3 0.0 1.2 1 0 0 1 1 1 0 MarR family Flavi_NS2B PF01002.14 gi|407464035|ref|YP_006774917.1| - 0.067 12.7 1.4 0.098 12.2 1.0 1.2 1 0 0 1 1 1 0 Flavivirus non-structural protein NS2B Tmemb_14 PF03647.8 gi|407464035|ref|YP_006774917.1| - 0.14 12.5 2.8 0.11 12.9 0.6 1.8 2 0 0 2 2 2 0 Transmembrane proteins 14C DUF443 PF04276.7 gi|407464036|ref|YP_006774918.1| - 0.0066 15.9 8.1 0.0083 15.5 5.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF443) DUF3493 PF11998.3 gi|407464036|ref|YP_006774918.1| - 0.0082 16.0 1.3 0.019 14.8 0.2 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF3493) MFS_1 PF07690.11 gi|407464036|ref|YP_006774918.1| - 0.011 14.4 0.4 0.014 14.1 0.3 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily Cation_ATPase_C PF00689.16 gi|407464036|ref|YP_006774918.1| - 0.11 12.0 2.0 0.11 11.9 0.1 1.8 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus DIM1 PF02966.11 gi|407464036|ref|YP_006774918.1| - 0.14 11.6 0.7 0.17 11.3 0.5 1.3 1 0 0 1 1 1 0 Mitosis protein DIM1 DUF3278 PF11683.3 gi|407464036|ref|YP_006774918.1| - 0.21 11.5 6.3 0.061 13.3 2.3 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3278) MARVEL PF01284.18 gi|407464036|ref|YP_006774918.1| - 1.5 8.6 6.9 5 6.9 3.3 2.0 2 0 0 2 2 2 0 Membrane-associating domain RNase_H PF00075.19 gi|407464037|ref|YP_006774919.1| - 7.7e-16 58.6 0.0 8.8e-16 58.4 0.0 1.0 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.1 gi|407464037|ref|YP_006774919.1| - 7.8e-13 48.0 0.2 1e-12 47.6 0.1 1.1 1 0 0 1 1 1 1 Reverse transcriptase-like Glyco_trans_1_2 PF13524.1 gi|407464037|ref|YP_006774919.1| - 0.14 12.4 0.2 0.25 11.6 0.1 1.4 1 1 0 1 1 1 0 Glycosyl transferases group 1 ATP-grasp_5 PF13549.1 gi|407464038|ref|YP_006774920.1| - 1.9e-79 265.9 0.5 3.7e-79 265.0 0.3 1.5 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.1 gi|407464038|ref|YP_006774920.1| - 5.2e-52 175.1 0.7 5.2e-52 175.1 0.5 2.0 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|407464038|ref|YP_006774920.1| - 1.2e-22 80.2 0.3 6.3e-22 77.9 0.1 2.4 2 0 0 2 2 2 1 CoA binding domain CoA_binding PF02629.14 gi|407464038|ref|YP_006774920.1| - 2.6e-10 40.6 3.2 8.7e-10 38.9 0.6 2.7 2 0 0 2 2 2 1 CoA binding domain ATP-grasp_2 PF08442.5 gi|407464038|ref|YP_006774920.1| - 6.9e-06 25.5 1.6 1.6e-05 24.4 1.1 1.7 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|407464038|ref|YP_006774920.1| - 0.0002 21.1 0.0 0.00048 19.9 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|407464038|ref|YP_006774920.1| - 0.0012 18.2 0.2 0.0023 17.2 0.1 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.17 gi|407464038|ref|YP_006774920.1| - 0.012 14.9 0.1 0.036 13.4 0.0 1.8 1 0 0 1 1 1 0 ATP-grasp domain DUF4619 PF15398.1 gi|407464038|ref|YP_006774920.1| - 0.13 11.6 0.1 0.27 10.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4619) HpaB_N PF11794.3 gi|407464039|ref|YP_006774921.1| - 5.5e-88 294.7 0.0 8.2e-88 294.2 0.0 1.3 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.8 gi|407464039|ref|YP_006774921.1| - 4.1e-73 244.6 0.1 5.4e-73 244.2 0.0 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal Bt_P21 PF05560.6 gi|407464039|ref|YP_006774921.1| - 0.043 13.1 0.1 7.2 5.9 0.0 2.4 2 0 0 2 2 2 0 Bacillus thuringiensis P21 molecular chaperone protein Peptidase_A25 PF03418.9 gi|407464040|ref|YP_006774922.1| - 0.0065 15.2 0.4 0.0085 14.8 0.3 1.1 1 0 0 1 1 1 1 Germination protease Peptidase_S24 PF00717.18 gi|407464041|ref|YP_006774923.1| - 6.3e-09 35.3 1.7 4.5e-08 32.6 0.2 2.3 2 0 0 2 2 2 1 Peptidase S24-like MscL PF01741.13 gi|407464041|ref|YP_006774923.1| - 0.05 13.7 1.6 0.053 13.6 0.0 1.9 2 0 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL DZR PF12773.2 gi|407464042|ref|YP_006774924.1| - 2.1e-08 33.8 5.1 4.3e-05 23.2 0.3 2.3 2 0 0 2 2 2 2 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|407464042|ref|YP_006774924.1| - 2.3e-05 23.4 7.2 2.3e-05 23.4 5.0 2.8 3 0 0 3 3 3 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|407464042|ref|YP_006774924.1| - 8.9e-05 21.8 8.9 8.9e-05 21.8 6.1 2.6 3 0 0 3 3 3 1 zinc-ribbon domain PRC PF05239.11 gi|407464042|ref|YP_006774924.1| - 0.0002 21.1 0.5 0.00037 20.3 0.4 1.4 1 0 0 1 1 1 1 PRC-barrel domain DUF3279 PF11682.3 gi|407464042|ref|YP_006774924.1| - 0.0041 16.6 0.8 2.4 7.7 0.1 3.2 3 0 0 3 3 3 1 Protein of unknown function (DUF3279) A2L_zn_ribbon PF08792.5 gi|407464042|ref|YP_006774924.1| - 0.065 12.7 0.0 0.065 12.7 0.0 4.0 3 1 0 3 3 2 0 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|407464042|ref|YP_006774924.1| - 0.079 12.2 0.1 0.079 12.2 0.1 3.3 3 1 0 3 3 3 0 TFIIB zinc-binding zf-B_box PF00643.19 gi|407464042|ref|YP_006774924.1| - 0.091 12.6 9.0 1.4 8.9 0.5 3.1 3 0 0 3 3 3 0 B-box zinc finger RRN7 PF11781.3 gi|407464042|ref|YP_006774924.1| - 0.21 11.1 11.2 3.8 7.0 2.3 3.5 3 1 0 3 3 3 0 RNA polymerase I-specific transcription initiation factor Rrn7 Prim_Zn_Ribbon PF08273.7 gi|407464042|ref|YP_006774924.1| - 2.7 8.1 13.1 11 6.2 0.0 4.1 3 1 0 3 3 3 0 Zinc-binding domain of primase-helicase GATA PF00320.22 gi|407464042|ref|YP_006774924.1| - 2.8 7.3 9.0 7.2 6.0 0.1 3.9 3 1 0 3 3 3 0 GATA zinc finger zf-AD PF07776.10 gi|407464042|ref|YP_006774924.1| - 2.8 7.9 5.0 1.9 8.5 0.0 2.8 3 1 0 3 3 3 0 Zinc-finger associated domain (zf-AD) Cript PF10235.4 gi|407464042|ref|YP_006774924.1| - 4.2 7.7 7.2 0.82 10.0 0.5 2.9 2 1 0 2 2 2 0 Microtubule-associated protein CRIPT GFA PF04828.9 gi|407464042|ref|YP_006774924.1| - 4.2 7.3 10.9 13 5.7 0.1 3.7 2 2 0 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme Thioredoxin PF00085.15 gi|407464043|ref|YP_006774925.1| - 1.9e-30 104.5 0.1 2.2e-30 104.3 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.1 gi|407464043|ref|YP_006774925.1| - 6.3e-12 45.4 0.2 1.1e-07 31.8 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_2 PF13098.1 gi|407464043|ref|YP_006774925.1| - 2.1e-10 40.7 0.0 7e-10 39.0 0.0 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.1 gi|407464043|ref|YP_006774925.1| - 2.3e-07 30.7 0.1 3.3e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_9 PF14595.1 gi|407464043|ref|YP_006774925.1| - 7.9e-07 28.6 0.1 8.4e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.1 gi|407464043|ref|YP_006774925.1| - 4.8e-06 26.2 0.0 6.7e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain AhpC-TSA PF00578.16 gi|407464043|ref|YP_006774925.1| - 6.8e-05 22.5 0.0 9.2e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|407464043|ref|YP_006774925.1| - 6.9e-05 22.4 0.1 0.0001 21.8 0.1 1.4 1 1 0 1 1 1 1 Redoxin HyaE PF07449.6 gi|407464043|ref|YP_006774925.1| - 0.00022 21.0 0.0 0.00029 20.7 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_4 PF13462.1 gi|407464043|ref|YP_006774925.1| - 0.001 19.0 0.1 0.11 12.4 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin DUF953 PF06110.6 gi|407464043|ref|YP_006774925.1| - 0.0084 15.5 0.5 0.024 14.0 0.2 1.9 1 1 0 1 1 1 1 Eukaryotic protein of unknown function (DUF953) Thioredoxin_6 PF13848.1 gi|407464043|ref|YP_006774925.1| - 0.01 15.6 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain TraF PF13728.1 gi|407464043|ref|YP_006774925.1| - 0.013 14.9 0.0 0.022 14.2 0.0 1.3 1 1 0 1 1 1 0 F plasmid transfer operon protein DUF836 PF05768.9 gi|407464043|ref|YP_006774925.1| - 0.022 14.9 0.0 0.033 14.4 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Phosducin PF02114.11 gi|407464043|ref|YP_006774925.1| - 0.026 13.2 0.0 0.029 13.0 0.0 1.1 1 0 0 1 1 1 0 Phosducin DSBA PF01323.15 gi|407464043|ref|YP_006774925.1| - 0.084 12.4 0.1 0.68 9.4 0.0 1.9 1 1 1 2 2 2 0 DSBA-like thioredoxin domain Glutaredoxin PF00462.19 gi|407464043|ref|YP_006774925.1| - 0.1 12.6 0.1 0.22 11.5 0.1 1.6 1 1 0 1 1 1 0 Glutaredoxin zinc_ribbon_2 PF13240.1 gi|407464044|ref|YP_006774926.1| - 3.4e-07 29.5 2.9 5.3e-07 28.9 2.0 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|407464044|ref|YP_006774926.1| - 1.1e-06 27.6 4.4 1.8e-06 26.9 3.0 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|407464044|ref|YP_006774926.1| - 0.00026 20.7 3.1 0.00039 20.1 2.1 1.2 1 0 0 1 1 1 1 Double zinc ribbon PAH PF02671.16 gi|407464044|ref|YP_006774926.1| - 0.00099 18.6 0.1 0.002 17.7 0.1 1.5 1 0 0 1 1 1 1 Paired amphipathic helix repeat RRN7 PF11781.3 gi|407464044|ref|YP_006774926.1| - 0.12 11.9 1.8 0.24 10.9 1.3 1.5 1 1 0 1 1 1 0 RNA polymerase I-specific transcription initiation factor Rrn7 Nudix_N_2 PF14803.1 gi|407464044|ref|YP_006774926.1| - 4.2 7.1 7.0 4.5 7.0 0.5 2.3 2 0 0 2 2 2 0 Nudix N-terminal zf-ribbon_3 PF13248.1 gi|407464045|ref|YP_006774927.1| - 8.6e-09 34.3 3.5 1.4e-08 33.7 2.4 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|407464045|ref|YP_006774927.1| - 4.4e-08 32.3 3.9 7.9e-08 31.5 2.7 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|407464045|ref|YP_006774927.1| - 4.6e-06 26.3 2.2 6.9e-06 25.7 1.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon UPF0547 PF10571.4 gi|407464045|ref|YP_006774927.1| - 2.1e-05 24.0 3.2 0.00016 21.3 2.2 2.0 1 1 1 2 2 2 2 Uncharacterised protein family UPF0547 Nudix_N_2 PF14803.1 gi|407464045|ref|YP_006774927.1| - 0.00023 20.7 4.1 0.083 12.5 0.1 2.4 2 0 0 2 2 2 2 Nudix N-terminal GFA PF04828.9 gi|407464045|ref|YP_006774927.1| - 0.02 14.8 3.7 0.57 10.1 0.1 2.4 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme RNA_POL_M_15KD PF02150.11 gi|407464045|ref|YP_006774927.1| - 0.032 13.9 3.7 2.1 8.0 0.4 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf-NADH-PPase PF09297.6 gi|407464045|ref|YP_006774927.1| - 0.039 13.4 6.1 4.8 6.7 4.3 2.2 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain Prok-RING_1 PF14446.1 gi|407464045|ref|YP_006774927.1| - 0.074 12.7 0.9 0.11 12.3 0.6 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-DHHC PF01529.15 gi|407464045|ref|YP_006774927.1| - 0.085 12.2 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase C1_1 PF00130.17 gi|407464045|ref|YP_006774927.1| - 0.15 11.8 1.4 0.22 11.2 1.0 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) RRN7 PF11781.3 gi|407464045|ref|YP_006774927.1| - 0.15 11.5 1.0 10 5.7 0.1 2.3 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 A2L_zn_ribbon PF08792.5 gi|407464045|ref|YP_006774927.1| - 0.26 10.7 5.4 2.1 7.9 0.6 2.4 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF35_N PF12172.3 gi|407464045|ref|YP_006774927.1| - 0.28 11.1 1.9 0.62 10.0 1.3 1.6 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Auto_anti-p27 PF06677.7 gi|407464045|ref|YP_006774927.1| - 0.39 10.5 4.2 17 5.2 2.8 2.3 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) NOB1_Zn_bind PF08772.6 gi|407464045|ref|YP_006774927.1| - 0.49 10.2 7.6 10 6.0 0.6 2.3 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like TF_Zn_Ribbon PF08271.7 gi|407464045|ref|YP_006774927.1| - 0.65 9.3 3.5 6 6.2 0.3 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding zf-tcix PF14952.1 gi|407464045|ref|YP_006774927.1| - 0.7 9.2 5.9 3.2 7.1 0.6 2.2 1 1 1 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding YhfH PF14149.1 gi|407464045|ref|YP_006774927.1| - 0.75 9.6 4.1 9 6.1 0.1 2.3 1 1 1 2 2 2 0 YhfH-like protein OrfB_Zn_ribbon PF07282.6 gi|407464045|ref|YP_006774927.1| - 2 8.1 4.0 6.7 6.4 2.8 1.8 1 1 0 1 1 1 0 Putative transposase DNA-binding domain Amidohydro_4 PF13147.1 gi|407464046|ref|YP_006774928.1| - 1.2e-19 71.4 0.0 9.1e-19 68.5 0.0 2.3 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|407464046|ref|YP_006774928.1| - 1.1e-10 41.7 0.7 1.5e-09 37.9 0.5 2.3 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|407464046|ref|YP_006774928.1| - 3.5e-08 33.1 2.8 1.1e-07 31.5 1.7 2.0 2 0 0 2 2 2 1 Amidohydrolase TatD_DNase PF01026.16 gi|407464046|ref|YP_006774928.1| - 3.3e-05 23.2 0.3 6e-05 22.3 0.0 1.6 2 1 0 2 2 2 1 TatD related DNase Amidohydro_3 PF07969.6 gi|407464046|ref|YP_006774928.1| - 0.00012 21.4 0.1 0.0055 15.9 0.0 2.6 3 0 0 3 3 3 1 Amidohydrolase family XPC-binding PF09280.6 gi|407464047|ref|YP_006774929.1| - 0.53 9.7 17.5 0.76 9.2 1.4 4.6 3 2 1 4 4 4 0 XPC-binding domain PCMT PF01135.14 gi|407464048|ref|YP_006774930.1| - 3.9e-49 167.0 0.0 4.5e-49 166.8 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.1 gi|407464048|ref|YP_006774930.1| - 3e-12 46.3 0.0 3.4e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|407464048|ref|YP_006774930.1| - 3.4e-11 43.7 0.0 4.2e-11 43.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|407464048|ref|YP_006774930.1| - 2.1e-08 33.5 0.0 2.4e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.9 gi|407464048|ref|YP_006774930.1| - 5.5e-07 29.1 0.0 8e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain GCD14 PF08704.5 gi|407464048|ref|YP_006774930.1| - 1.6e-06 27.8 0.0 2.1e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_26 PF13659.1 gi|407464048|ref|YP_006774930.1| - 2.2e-06 27.7 0.0 3.2e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.10 gi|407464048|ref|YP_006774930.1| - 9.4e-06 24.8 0.0 1.3e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_4 PF02390.12 gi|407464048|ref|YP_006774930.1| - 5.5e-05 22.3 0.0 7.9e-05 21.7 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase PrmA PF06325.8 gi|407464048|ref|YP_006774930.1| - 7.6e-05 21.9 0.0 8.8e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.11 gi|407464048|ref|YP_006774930.1| - 0.00055 19.5 0.0 0.0007 19.2 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_11 PF08241.7 gi|407464048|ref|YP_006774930.1| - 0.00068 20.0 0.0 0.0011 19.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407464048|ref|YP_006774930.1| - 0.0081 15.8 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.12 gi|407464048|ref|YP_006774930.1| - 0.011 14.6 0.0 0.016 14.1 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin Methyltransf_24 PF13578.1 gi|407464048|ref|YP_006774930.1| - 0.024 15.4 0.0 0.035 14.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Ubie_methyltran PF01209.13 gi|407464048|ref|YP_006774930.1| - 0.051 12.6 0.0 0.068 12.2 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.1 gi|407464048|ref|YP_006774930.1| - 0.057 13.7 0.0 0.08 13.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain tRNA_U5-meth_tr PF05958.6 gi|407464048|ref|YP_006774930.1| - 0.082 11.5 0.0 0.1 11.2 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_12 PF08242.7 gi|407464048|ref|YP_006774930.1| - 0.11 13.0 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.15 gi|407464048|ref|YP_006774930.1| - 0.13 11.2 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Memo PF01875.12 gi|407464049|ref|YP_006774931.1| - 7.2e-82 274.3 0.5 8.2e-82 274.1 0.3 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.13 gi|407464049|ref|YP_006774931.1| - 0.0062 15.5 0.1 0.014 14.4 0.0 1.5 1 1 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase CbtA PF09490.5 gi|407464049|ref|YP_006774931.1| - 0.079 12.2 0.1 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtA) AMMECR1 PF01871.12 gi|407464050|ref|YP_006774932.1| - 8.3e-59 197.5 0.0 9.9e-59 197.2 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 Radical_SAM PF04055.16 gi|407464051|ref|YP_006774933.1| - 5.3e-15 55.9 0.0 5.3e-15 55.9 0.0 1.9 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|407464051|ref|YP_006774933.1| - 0.0067 16.5 0.0 0.015 15.3 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain HSP20 PF00011.16 gi|407464052|ref|YP_006774934.1| - 4.9e-25 87.3 2.6 6.5e-25 86.9 1.8 1.2 1 0 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|407464052|ref|YP_006774934.1| - 0.0014 19.1 0.4 0.0031 18.0 0.3 1.6 1 0 0 1 1 1 1 CS domain Mrr_cat PF04471.7 gi|407464053|ref|YP_006774935.1| - 0.00012 21.8 0.0 0.00024 20.9 0.0 1.5 1 0 0 1 1 1 1 Restriction endonuclease DUF4143 PF13635.1 gi|407464053|ref|YP_006774935.1| - 0.00026 21.1 0.1 0.00088 19.4 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4143) DUF234 PF03008.9 gi|407464053|ref|YP_006774935.1| - 0.013 15.6 0.0 0.028 14.5 0.0 1.7 1 0 0 1 1 1 0 Archaea bacterial proteins of unknown function HhH-GPD PF00730.20 gi|407464053|ref|YP_006774935.1| - 0.031 14.5 0.0 0.066 13.5 0.0 1.6 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein Copper-bind PF00127.15 gi|407464054|ref|YP_006774936.1| - 0.00011 22.3 0.2 0.00044 20.4 0.0 2.0 2 0 0 2 2 2 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 gi|407464054|ref|YP_006774936.1| - 0.00034 20.4 0.4 0.0014 18.5 0.0 2.1 2 2 0 2 2 2 1 Cupredoxin-like domain DUF106 PF01956.11 gi|407464054|ref|YP_006774936.1| - 0.0025 17.3 0.0 0.0035 16.9 0.0 1.2 1 0 0 1 1 1 1 Integral membrane protein DUF106 DUF948 PF06103.6 gi|407464054|ref|YP_006774936.1| - 0.018 14.8 1.3 0.027 14.3 0.9 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Syntaxin_2 PF14523.1 gi|407464054|ref|YP_006774936.1| - 0.057 13.4 1.3 0.079 12.9 0.9 1.2 1 0 0 1 1 1 0 Syntaxin-like protein LEA_4 PF02987.11 gi|407464054|ref|YP_006774936.1| - 0.24 11.3 5.7 1.4 8.8 0.9 2.4 2 0 0 2 2 2 0 Late embryogenesis abundant protein YtxH PF12732.2 gi|407464054|ref|YP_006774936.1| - 2.2 8.6 6.6 8.3 6.8 4.4 2.0 1 1 0 1 1 1 0 YtxH-like protein Rib_5-P_isom_A PF06026.9 gi|407464055|ref|YP_006774937.1| - 2.6e-50 170.1 0.1 3.1e-50 169.8 0.1 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.17 gi|407464055|ref|YP_006774937.1| - 0.00018 21.1 0.2 0.091 12.3 0.0 2.2 2 0 0 2 2 2 2 DeoR C terminal sensor domain Flagellin_C PF00700.16 gi|407464056|ref|YP_006774938.1| - 0.025 14.7 1.4 0.033 14.3 0.2 1.9 2 0 0 2 2 2 0 Bacterial flagellin C-terminal helical region Ribosomal_L37e PF01907.14 gi|407464057|ref|YP_006774939.1| - 1.6e-21 75.8 10.9 1.7e-21 75.7 7.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e HypA PF01155.14 gi|407464057|ref|YP_006774939.1| - 0.0038 16.8 1.0 0.0042 16.7 0.7 1.1 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family zf-ribbon_3 PF13248.1 gi|407464057|ref|YP_006774939.1| - 0.0051 15.9 1.5 0.0073 15.4 1.0 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|407464057|ref|YP_006774939.1| - 0.0075 16.0 1.1 0.0084 15.8 0.8 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_6 PF14599.1 gi|407464057|ref|YP_006774939.1| - 0.011 15.4 1.1 0.013 15.2 0.8 1.3 1 0 0 1 1 1 0 Zinc-ribbon Stc1 PF12898.2 gi|407464057|ref|YP_006774939.1| - 0.023 14.7 1.3 0.026 14.5 0.9 1.1 1 0 0 1 1 1 0 Stc1 domain DNA_RNApol_7kD PF03604.8 gi|407464057|ref|YP_006774939.1| - 0.055 12.9 3.3 0.055 12.9 2.3 2.1 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Cation_ATPase_N PF00690.21 gi|407464057|ref|YP_006774939.1| - 0.061 12.7 0.0 0.09 12.2 0.0 1.2 1 0 0 1 1 1 0 Cation transporter/ATPase, N-terminus Baculo_ME53 PF06061.6 gi|407464057|ref|YP_006774939.1| - 0.069 12.1 1.4 0.069 12.1 0.9 1.0 1 0 0 1 1 1 0 Baculoviridae ME53 Zn-ribbon_8 PF09723.5 gi|407464057|ref|YP_006774939.1| - 0.13 12.1 3.5 1.8 8.5 0.2 2.1 1 1 1 2 2 2 0 Zinc ribbon domain zf-Mss51 PF13824.1 gi|407464057|ref|YP_006774939.1| - 0.14 12.0 3.8 1.3 8.9 2.6 2.0 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 OrfB_Zn_ribbon PF07282.6 gi|407464057|ref|YP_006774939.1| - 0.14 11.8 3.5 0.19 11.3 2.5 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF2688 PF10892.3 gi|407464057|ref|YP_006774939.1| - 0.38 10.4 5.3 0.24 11.1 1.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2688) DUF35_N PF12172.3 gi|407464057|ref|YP_006774939.1| - 0.68 9.9 3.7 0.95 9.4 2.6 1.2 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-HIT PF04438.11 gi|407464057|ref|YP_006774939.1| - 0.88 9.2 4.1 6.4 6.5 0.1 2.2 2 0 0 2 2 2 0 HIT zinc finger Ribosomal_S14 PF00253.16 gi|407464057|ref|YP_006774939.1| - 1.4 8.3 8.5 2 7.8 0.3 2.1 1 1 1 2 2 2 0 Ribosomal protein S14p/S29e RNA_POL_M_15KD PF02150.11 gi|407464057|ref|YP_006774939.1| - 1.5 8.5 3.8 23 4.7 0.5 2.1 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit LSM PF01423.17 gi|407464058|ref|YP_006774940.1| - 4.2e-21 74.2 0.3 4.8e-21 74.0 0.2 1.0 1 0 0 1 1 1 1 LSM domain Creatininase PF02633.9 gi|407464059|ref|YP_006774941.1| - 1.2e-55 188.1 0.0 1.5e-55 187.8 0.0 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase HTH_7 PF02796.10 gi|407464059|ref|YP_006774941.1| - 0.095 12.5 0.1 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF4473 PF14747.1 gi|407464059|ref|YP_006774941.1| - 0.1 12.7 0.1 0.22 11.7 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) Formyl_trans_N PF00551.14 gi|407464060|ref|YP_006774942.1| - 1.1e-39 135.8 0.0 1.5e-39 135.3 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase ACT_6 PF13740.1 gi|407464060|ref|YP_006774942.1| - 2.3e-08 33.6 0.0 4.9e-08 32.5 0.0 1.6 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|407464060|ref|YP_006774942.1| - 0.0088 16.3 0.1 0.036 14.3 0.0 2.1 1 1 0 1 1 1 1 ACT domain ACT PF01842.20 gi|407464060|ref|YP_006774942.1| - 0.073 12.5 0.0 0.22 11.0 0.0 1.8 1 0 0 1 1 1 0 ACT domain PGM_PMM_I PF02878.11 gi|407464061|ref|YP_006774943.1| - 7.5e-38 129.1 0.0 1.4e-37 128.2 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|407464061|ref|YP_006774943.1| - 1.5e-24 86.3 0.0 1.2e-23 83.3 0.0 2.4 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|407464061|ref|YP_006774943.1| - 4.5e-23 81.4 0.0 7.6e-23 80.7 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|407464061|ref|YP_006774943.1| - 1.3e-11 44.3 0.0 3.2e-11 43.0 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ribosomal_L7Ae PF01248.21 gi|407464062|ref|YP_006774944.1| - 2e-25 88.1 0.1 2.4e-25 87.8 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.1 gi|407464062|ref|YP_006774944.1| - 0.028 14.1 0.0 0.045 13.5 0.0 1.3 1 0 0 1 1 1 0 PELOTA RNA binding domain DUF3055 PF11256.3 gi|407464062|ref|YP_006774944.1| - 0.063 13.4 0.0 0.1 12.7 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3055) Ribosomal_S28e PF01200.13 gi|407464063|ref|YP_006774945.1| - 7.4e-29 99.3 5.8 7.8e-29 99.2 4.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L24e PF01246.15 gi|407464064|ref|YP_006774946.1| - 3.9e-18 65.0 0.6 4.1e-18 65.0 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e DUF2256 PF10013.4 gi|407464064|ref|YP_006774946.1| - 0.023 14.4 6.2 4.9 6.9 0.0 3.1 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF581 PF04570.9 gi|407464064|ref|YP_006774946.1| - 0.083 12.1 0.2 0.15 11.3 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF581) zf-MYND PF01753.13 gi|407464064|ref|YP_006774946.1| - 0.091 12.6 0.1 0.2 11.5 0.0 1.6 1 1 0 1 1 1 0 MYND finger zf-FCS PF06467.9 gi|407464064|ref|YP_006774946.1| - 0.76 9.4 3.7 0.35 10.5 0.9 1.6 2 1 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif NDK PF00334.14 gi|407464065|ref|YP_006774947.1| - 7.6e-50 168.2 0.0 8.4e-50 168.0 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase GTP_EFTU PF00009.22 gi|407464066|ref|YP_006774948.1| - 1.4e-32 112.7 0.0 4.3e-32 111.0 0.0 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.3 gi|407464066|ref|YP_006774948.1| - 7e-23 80.5 0.7 1.8e-22 79.2 0.5 1.7 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.1 gi|407464066|ref|YP_006774948.1| - 1.1e-08 34.5 1.1 2.9e-08 33.2 0.1 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 4 MMR_HSR1 PF01926.18 gi|407464066|ref|YP_006774948.1| - 2.4e-07 30.6 0.1 9.1e-07 28.8 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.20 gi|407464066|ref|YP_006774948.1| - 3.7e-06 26.9 0.1 1.8e-05 24.7 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 Miro PF08477.8 gi|407464066|ref|YP_006774948.1| - 1.3e-05 25.6 0.0 8.2e-05 23.0 0.0 2.4 2 0 0 2 2 2 1 Miro-like protein ATP_bind_1 PF03029.12 gi|407464066|ref|YP_006774948.1| - 3.7e-05 23.3 0.0 0.00019 21.0 0.0 2.1 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein Dynamin_N PF00350.18 gi|407464066|ref|YP_006774948.1| - 0.00026 20.8 0.1 0.14 11.9 0.0 3.0 2 0 0 2 2 2 2 Dynamin family Ras PF00071.17 gi|407464066|ref|YP_006774948.1| - 0.0043 16.4 0.0 0.017 14.4 0.0 2.0 1 1 0 1 1 1 1 Ras family Thioredoxin PF00085.15 gi|407464067|ref|YP_006774949.1| - 8.7e-30 102.4 0.1 1.1e-29 102.1 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.1 gi|407464067|ref|YP_006774949.1| - 1.2e-09 38.0 0.1 4.2e-08 33.1 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_2 PF13098.1 gi|407464067|ref|YP_006774949.1| - 3.6e-09 36.8 0.2 3.5e-08 33.6 0.1 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain Redoxin PF08534.5 gi|407464067|ref|YP_006774949.1| - 3.5e-07 29.8 0.0 4.4e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_9 PF14595.1 gi|407464067|ref|YP_006774949.1| - 2.3e-06 27.1 0.1 3.2e-06 26.7 0.1 1.4 1 1 0 1 1 1 1 Thioredoxin Phosducin PF02114.11 gi|407464067|ref|YP_006774949.1| - 7.5e-06 24.8 0.0 7.7e-06 24.8 0.0 1.1 1 0 0 1 1 1 1 Phosducin Thioredoxin_7 PF13899.1 gi|407464067|ref|YP_006774949.1| - 2.4e-05 24.2 0.1 4.3e-05 23.4 0.1 1.4 1 0 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.16 gi|407464067|ref|YP_006774949.1| - 0.0012 18.4 0.0 0.0015 18.1 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family HyaE PF07449.6 gi|407464067|ref|YP_006774949.1| - 0.0095 15.8 0.0 0.019 14.8 0.0 1.5 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Toxin-deaminase PF14424.1 gi|407464067|ref|YP_006774949.1| - 0.034 14.1 0.0 0.048 13.6 0.0 1.3 1 0 0 1 1 1 0 The BURPS668_1122 family of deaminases ERp29_N PF07912.8 gi|407464067|ref|YP_006774949.1| - 0.04 13.8 0.0 0.073 12.9 0.0 1.4 1 1 0 1 1 1 0 ERp29, N-terminal domain DUF836 PF05768.9 gi|407464067|ref|YP_006774949.1| - 0.092 13.0 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) TraF PF13728.1 gi|407464067|ref|YP_006774949.1| - 0.095 12.1 0.1 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 F plasmid transfer operon protein TF_Zn_Ribbon PF08271.7 gi|407464068|ref|YP_006774950.1| - 0.019 14.2 1.4 1 8.7 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding DUF1451 PF07295.6 gi|407464068|ref|YP_006774950.1| - 0.037 13.7 0.2 0.041 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) RRN7 PF11781.3 gi|407464068|ref|YP_006774950.1| - 0.042 13.3 1.3 0.097 12.1 0.0 1.9 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 zf-C2H2_6 PF13912.1 gi|407464068|ref|YP_006774950.1| - 0.065 13.1 1.8 0.9 9.5 0.1 2.4 2 1 0 2 2 2 0 C2H2-type zinc finger zf-C3HC4_3 PF13920.1 gi|407464068|ref|YP_006774950.1| - 0.12 12.0 0.5 0.17 11.6 0.3 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C2H2 PF00096.21 gi|407464068|ref|YP_006774950.1| - 0.15 12.4 1.9 11 6.6 0.1 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type He_PIG PF05345.7 gi|407464069|ref|YP_006774951.1| - 0.0022 17.9 0.1 0.0092 15.9 0.0 2.1 2 0 0 2 2 2 1 Putative Ig domain Archease PF01951.11 gi|407464070|ref|YP_006774952.1| - 6.4e-34 116.8 0.8 7e-34 116.7 0.6 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) RdgC PF04381.7 gi|407464070|ref|YP_006774952.1| - 0.0071 15.3 0.1 0.0084 15.0 0.1 1.2 1 0 0 1 1 1 1 Putative exonuclease, RdgC Glyoxalase_2 PF12681.2 gi|407464071|ref|YP_006774953.1| - 3.3e-10 40.5 0.0 4.8e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|407464071|ref|YP_006774953.1| - 0.00023 21.1 0.0 0.00042 20.2 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ADH_N PF08240.7 gi|407464072|ref|YP_006774954.1| - 4.4e-24 84.3 0.5 7.3e-24 83.6 0.3 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|407464072|ref|YP_006774954.1| - 7.1e-05 22.3 0.0 0.0002 20.8 0.0 1.7 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 gi|407464072|ref|YP_006774954.1| - 0.0053 17.6 0.0 0.012 16.5 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Shikimate_DH PF01488.15 gi|407464072|ref|YP_006774954.1| - 0.039 14.0 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase SNARE_assoc PF09335.6 gi|407464073|ref|YP_006774955.1| - 1.2e-19 70.6 5.5 1.5e-19 70.3 3.5 1.5 1 1 0 1 1 1 1 SNARE associated Golgi protein DUF72 PF01904.13 gi|407464074|ref|YP_006774956.1| - 2.2e-46 158.4 0.0 2.6e-46 158.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 UDG PF03167.14 gi|407464075|ref|YP_006774957.1| - 8.5e-28 96.7 0.0 1.2e-27 96.2 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Nitroreductase PF00881.19 gi|407464076|ref|YP_006774958.1| - 9.4e-08 32.0 0.0 1.1e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family RnfC_N PF13375.1 gi|407464076|ref|YP_006774958.1| - 0.096 12.4 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain HTH_9 PF08221.6 gi|407464076|ref|YP_006774958.1| - 0.15 11.9 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain A2M_N PF01835.14 gi|407464077|ref|YP_006774959.1| - 0.057 13.6 0.0 0.78 10.0 0.0 2.8 2 0 0 2 2 2 0 MG2 domain CDC45 PF02724.9 gi|407464077|ref|YP_006774959.1| - 0.67 7.9 14.7 0.99 7.3 10.2 1.2 1 0 0 1 1 1 0 CDC45-like protein Paramyxo_ncap PF00973.14 gi|407464077|ref|YP_006774959.1| - 2.5 6.7 13.1 3.8 6.0 9.0 1.2 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein SprA-related PF12118.3 gi|407464077|ref|YP_006774959.1| - 2.6 7.2 17.4 4.3 6.5 12.0 1.3 1 0 0 1 1 1 0 SprA-related family Nop53 PF07767.6 gi|407464077|ref|YP_006774959.1| - 8.1 5.3 31.9 12 4.7 22.1 1.2 1 0 0 1 1 1 0 Nop53 (60S ribosomal biogenesis) Bystin PF05291.6 gi|407464077|ref|YP_006774959.1| - 8.5 5.2 9.5 25 3.6 6.6 1.8 1 1 0 1 1 1 0 Bystin DUF3106 PF11304.3 gi|407464078|ref|YP_006774960.1| - 1e-06 29.1 23.7 0.17 12.3 0.1 6.5 2 2 3 5 5 5 4 Protein of unknown function (DUF3106) SieB PF14163.1 gi|407464078|ref|YP_006774960.1| - 0.0099 15.4 2.2 0.33 10.5 0.2 2.9 3 0 0 3 3 3 1 Superinfection exclusion protein B DUF387 PF04079.11 gi|407464078|ref|YP_006774960.1| - 0.041 13.2 0.3 8.3 5.7 0.0 2.8 2 1 1 3 3 3 0 Putative transcriptional regulators (Ypuh-like) Mg_chelatase_2 PF13335.1 gi|407464078|ref|YP_006774960.1| - 6 7.3 6.7 7.8 6.9 0.0 4.3 4 2 2 6 6 6 0 Magnesium chelatase, subunit ChlI DUF1059 PF06348.6 gi|407464079|ref|YP_006774961.1| - 1.2e-19 69.9 0.7 1.4e-19 69.6 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) Mut7-C PF01927.11 gi|407464083|ref|YP_006774965.1| - 3.7e-41 140.5 0.3 4.2e-41 140.3 0.2 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain PIN_4 PF13638.1 gi|407464083|ref|YP_006774965.1| - 0.011 15.7 0.4 0.024 14.7 0.1 1.6 2 0 0 2 2 2 0 PIN domain Rpr2 PF04032.11 gi|407464083|ref|YP_006774965.1| - 0.06 13.2 1.1 0.12 12.2 0.5 1.6 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain tRNA-synt_1e PF01406.14 gi|407464083|ref|YP_006774965.1| - 0.78 8.8 4.8 2.2 7.3 3.3 1.7 1 1 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain zf-ribbon_3 PF13248.1 gi|407464084|ref|YP_006774966.1| - 0.016 14.3 1.2 3.2 7.0 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|407464084|ref|YP_006774966.1| - 0.027 14.2 0.8 0.034 13.9 0.5 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-C3HC4_3 PF13920.1 gi|407464084|ref|YP_006774966.1| - 0.052 13.2 0.8 0.067 12.8 0.5 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF2321 PF10083.4 gi|407464084|ref|YP_006774966.1| - 0.067 12.6 0.1 0.072 12.5 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) zinc_ribbon_2 PF13240.1 gi|407464084|ref|YP_006774966.1| - 0.73 9.4 4.1 6.7 6.3 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain EzrA PF06160.7 gi|407464085|ref|YP_006774967.1| - 0.00051 18.3 0.1 0.00053 18.2 0.1 1.0 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA IFRD PF05004.8 gi|407464085|ref|YP_006774967.1| - 0.048 12.7 0.2 0.049 12.7 0.1 1.1 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) SET PF00856.23 gi|407464085|ref|YP_006774967.1| - 0.14 12.4 0.0 0.22 11.8 0.0 1.4 2 0 0 2 2 2 0 SET domain Aldo_ket_red PF00248.16 gi|407464087|ref|YP_006774969.1| - 2.5e-57 193.8 0.0 2.9e-57 193.6 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family HD_4 PF13328.1 gi|407464088|ref|YP_006774970.1| - 2.3e-18 66.3 0.0 3e-18 65.9 0.0 1.1 1 0 0 1 1 1 1 HD domain Fic_N PF13784.1 gi|407464088|ref|YP_006774970.1| - 0.16 11.8 0.7 4 7.3 0.1 2.3 2 0 0 2 2 2 0 Fic/DOC family N-terminal GIT1_C PF12205.3 gi|407464089|ref|YP_006774971.1| - 0.013 15.3 0.0 0.025 14.4 0.0 1.5 1 1 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term tRNA-synt_His PF13393.1 gi|407464090|ref|YP_006774972.1| - 6.2e-48 163.4 0.0 8.1e-48 163.0 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|407464090|ref|YP_006774972.1| - 9.8e-17 61.0 0.1 2e-16 60.0 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|407464090|ref|YP_006774972.1| - 1.9e-10 40.5 0.1 6.2e-10 38.8 0.0 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2d PF01409.15 gi|407464090|ref|YP_006774972.1| - 0.00043 19.5 0.0 0.00095 18.4 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) DUF2812 PF11193.3 gi|407464090|ref|YP_006774972.1| - 0.015 15.4 2.6 0.066 13.3 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2812) RPT PF13446.1 gi|407464090|ref|YP_006774972.1| - 0.028 13.8 0.2 0.06 12.7 0.1 1.6 1 0 0 1 1 1 0 A repeated domain in UCH-protein eIF-6 PF01912.13 gi|407464091|ref|YP_006774973.1| - 5.6e-66 221.4 3.9 6.6e-66 221.1 2.7 1.0 1 0 0 1 1 1 1 eIF-6 family DUF167 PF02594.11 gi|407464091|ref|YP_006774973.1| - 0.049 13.5 1.2 0.14 12.0 0.3 2.0 2 0 0 2 2 2 0 Uncharacterised ACR, YggU family COG1872 Fer4 PF00037.22 gi|407464092|ref|YP_006774974.1| - 1.7e-09 36.8 12.8 5e-06 25.8 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|407464092|ref|YP_006774974.1| - 2.8e-09 37.2 4.5 0.00042 20.6 1.4 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|407464092|ref|YP_006774974.1| - 1.1e-08 35.0 0.6 0.0019 18.2 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|407464092|ref|YP_006774974.1| - 8.1e-08 32.4 5.4 4.1e-07 30.1 3.8 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|407464092|ref|YP_006774974.1| - 5.8e-07 29.2 2.5 0.0024 17.6 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|407464092|ref|YP_006774974.1| - 1.1e-06 28.3 19.1 2.5e-05 23.9 5.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|407464092|ref|YP_006774974.1| - 1.8e-06 27.5 13.2 0.0026 17.5 3.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|407464092|ref|YP_006774974.1| - 3.4e-06 26.6 11.7 0.0058 16.4 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|407464092|ref|YP_006774974.1| - 7.6e-06 26.4 7.7 0.0036 17.8 0.8 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|407464092|ref|YP_006774974.1| - 1.3e-05 25.8 6.4 0.0031 18.2 1.9 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_13 PF13370.1 gi|407464092|ref|YP_006774974.1| - 4.2e-05 23.8 5.7 0.031 14.6 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|407464092|ref|YP_006774974.1| - 5.5e-05 23.1 6.8 0.042 14.1 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|407464092|ref|YP_006774974.1| - 0.00011 22.5 9.0 0.00086 19.6 4.7 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|407464092|ref|YP_006774974.1| - 0.00013 22.1 4.3 0.0047 17.2 4.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|407464092|ref|YP_006774974.1| - 0.0054 16.5 1.1 1.9 8.4 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|407464092|ref|YP_006774974.1| - 0.1 13.2 16.6 0.19 12.3 1.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|407464093|ref|YP_006774975.1| - 3.6e-10 40.0 2.5 0.00021 21.5 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|407464093|ref|YP_006774975.1| - 7.5e-09 34.8 11.5 0.00011 21.6 2.6 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|407464093|ref|YP_006774975.1| - 8.9e-09 35.0 5.1 0.00089 19.0 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|407464093|ref|YP_006774975.1| - 1.4e-08 34.6 15.4 7.2e-07 29.1 6.4 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|407464093|ref|YP_006774975.1| - 2.7e-07 31.2 4.5 0.00043 20.9 0.7 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.1 gi|407464093|ref|YP_006774975.1| - 5.3e-07 29.8 9.7 2.2e-06 27.8 6.7 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|407464093|ref|YP_006774975.1| - 2.9e-06 27.0 10.7 0.0019 18.0 7.7 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|407464093|ref|YP_006774975.1| - 3.9e-06 26.4 11.0 0.0013 18.4 3.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|407464093|ref|YP_006774975.1| - 1.4e-05 25.3 6.5 3e-05 24.2 4.5 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|407464093|ref|YP_006774975.1| - 0.00043 20.0 12.4 0.035 14.0 0.8 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|407464093|ref|YP_006774975.1| - 0.00049 20.4 10.6 0.00093 19.5 5.7 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|407464093|ref|YP_006774975.1| - 0.0017 18.8 8.0 0.13 12.8 0.3 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|407464093|ref|YP_006774975.1| - 0.007 16.2 1.5 0.59 10.0 0.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|407464093|ref|YP_006774975.1| - 0.01 16.3 15.6 0.22 12.1 4.3 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|407464093|ref|YP_006774975.1| - 0.011 16.1 8.9 1.3 9.4 2.3 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|407464093|ref|YP_006774975.1| - 0.022 15.0 12.6 0.16 12.3 0.9 3.0 3 1 0 3 3 2 0 4Fe-4S binding domain Furin-like PF00757.15 gi|407464093|ref|YP_006774975.1| - 0.064 12.9 4.5 0.11 12.1 3.1 1.3 1 0 0 1 1 1 0 Furin-like cysteine rich region DNA_pol3_delta2 PF13177.1 gi|407464094|ref|YP_006774976.1| - 7.4e-15 54.9 0.1 1.8e-12 47.2 0.1 2.4 1 1 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.6 gi|407464094|ref|YP_006774976.1| - 1.5e-12 47.2 0.9 2.7e-12 46.4 0.2 1.8 2 0 0 2 2 2 1 Replication factor C C-terminal domain AAA PF00004.24 gi|407464094|ref|YP_006774976.1| - 3.3e-11 43.4 0.7 8.3e-11 42.2 0.1 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 gi|407464094|ref|YP_006774976.1| - 1.8e-07 30.2 0.1 0.0062 15.2 0.1 2.4 1 1 0 2 2 2 2 Rad17 cell cycle checkpoint protein AAA_22 PF13401.1 gi|407464094|ref|YP_006774976.1| - 2.2e-05 24.6 0.9 0.023 14.8 0.0 2.6 1 1 1 2 2 2 2 AAA domain RuvB_N PF05496.7 gi|407464094|ref|YP_006774976.1| - 5.1e-05 22.4 0.0 0.00019 20.5 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_3 PF07726.6 gi|407464094|ref|YP_006774976.1| - 0.00011 21.8 0.0 0.00021 20.9 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|407464094|ref|YP_006774976.1| - 0.00042 20.3 0.2 0.025 14.5 0.0 2.6 2 1 1 3 3 3 1 AAA ATPase domain DNA_pol3_delta PF06144.8 gi|407464094|ref|YP_006774976.1| - 0.0015 18.0 0.1 0.0035 16.8 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Mg_chelatase PF01078.16 gi|407464094|ref|YP_006774976.1| - 0.0024 17.0 0.0 0.2 10.7 0.0 2.5 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI DEAD PF00270.24 gi|407464094|ref|YP_006774976.1| - 0.0079 15.6 0.5 0.38 10.2 0.0 2.5 1 1 1 2 2 2 1 DEAD/DEAH box helicase Sigma54_activ_2 PF14532.1 gi|407464094|ref|YP_006774976.1| - 0.01 15.8 0.1 0.4 10.7 0.0 2.8 2 1 0 2 2 2 0 Sigma-54 interaction domain PhoH PF02562.11 gi|407464094|ref|YP_006774976.1| - 0.011 15.0 0.2 2.9 7.0 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein AAA_18 PF13238.1 gi|407464094|ref|YP_006774976.1| - 0.016 15.5 1.1 0.056 13.7 0.1 2.4 2 1 0 2 2 2 0 AAA domain ResIII PF04851.10 gi|407464094|ref|YP_006774976.1| - 0.018 14.8 0.3 0.18 11.5 0.2 2.4 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_10 PF12846.2 gi|407464094|ref|YP_006774976.1| - 0.025 14.0 1.7 4.4 6.6 0.0 2.7 2 1 1 3 3 3 0 AAA-like domain AAA_5 PF07728.9 gi|407464094|ref|YP_006774976.1| - 0.045 13.4 0.5 0.86 9.3 0.4 2.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.21 gi|407464094|ref|YP_006774976.1| - 0.047 13.1 0.0 8.6 5.8 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain eRF1_1 PF03463.10 gi|407464094|ref|YP_006774976.1| - 0.049 13.1 0.1 0.16 11.5 0.1 1.8 1 1 1 2 2 2 0 eRF1 domain 1 NB-ARC PF00931.17 gi|407464094|ref|YP_006774976.1| - 0.066 12.0 0.1 0.23 10.2 0.0 1.9 2 0 0 2 2 2 0 NB-ARC domain Sld5 PF05916.6 gi|407464095|ref|YP_006774977.1| - 8.2e-07 29.2 0.2 1.2e-06 28.7 0.2 1.2 1 0 0 1 1 1 1 GINS complex protein RFC1 PF08519.7 gi|407464095|ref|YP_006774977.1| - 0.0094 15.7 0.6 0.014 15.1 0.4 1.2 1 0 0 1 1 1 1 Replication factor RFC1 C terminal domain His_kinase PF06580.8 gi|407464095|ref|YP_006774977.1| - 0.061 13.2 0.2 0.17 11.7 0.1 1.8 1 0 0 1 1 1 0 Histidine kinase MCM PF00493.18 gi|407464096|ref|YP_006774978.1| - 4.5e-123 410.2 0.4 6.2e-123 409.8 0.3 1.2 1 0 0 1 1 1 1 MCM2/3/5 family MCM_N PF14551.1 gi|407464096|ref|YP_006774978.1| - 1.6e-16 60.8 1.0 5.4e-16 59.1 0.2 2.2 2 0 0 2 2 2 1 MCM N-terminal domain Mg_chelatase PF01078.16 gi|407464096|ref|YP_006774978.1| - 3.1e-06 26.4 0.0 0.00025 20.2 0.0 2.5 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|407464096|ref|YP_006774978.1| - 2.8e-05 23.8 0.1 0.0002 21.1 0.0 2.5 3 1 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|407464096|ref|YP_006774978.1| - 0.0018 17.8 0.0 0.0059 16.2 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF3552 PF12072.3 gi|407464096|ref|YP_006774978.1| - 2.4 7.3 7.3 1.7 7.8 2.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) DEAD PF00270.24 gi|407464097|ref|YP_006774979.1| - 5.2e-29 100.8 1.3 1e-28 99.9 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|407464097|ref|YP_006774979.1| - 1.1e-10 41.2 0.0 2.4e-10 40.1 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HHH_5 PF14520.1 gi|407464097|ref|YP_006774979.1| - 1.2e-09 38.2 1.5 4.1e-09 36.4 1.1 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain ResIII PF04851.10 gi|407464097|ref|YP_006774979.1| - 1.2e-06 28.5 0.0 3.5e-06 26.9 0.0 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Sec63 PF02889.11 gi|407464097|ref|YP_006774979.1| - 3e-06 26.6 0.1 3e-06 26.6 0.1 2.1 3 0 0 3 3 3 1 Sec63 Brl domain HHH_2 PF12826.2 gi|407464097|ref|YP_006774979.1| - 4.7e-06 26.4 0.4 7.3e-05 22.5 0.0 2.8 2 0 0 2 2 2 1 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.4 gi|407464097|ref|YP_006774979.1| - 0.00011 21.6 0.0 0.00032 20.1 0.0 1.8 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda AAA_25 PF13481.1 gi|407464097|ref|YP_006774979.1| - 0.077 12.3 0.0 0.45 9.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain KIP1 PF07765.7 gi|407464097|ref|YP_006774979.1| - 0.1 12.4 0.0 0.39 10.5 0.0 2.0 1 0 0 1 1 1 0 KIP1-like protein Glycos_transf_4 PF00953.16 gi|407464098|ref|YP_006774980.1| - 9.4e-28 97.0 16.8 9.4e-28 97.0 11.7 2.0 2 0 0 2 2 2 1 Glycosyl transferase family 4 Big_3_3 PF13750.1 gi|407464098|ref|YP_006774980.1| - 0.16 11.3 0.0 0.3 10.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) Colicin_V PF02674.11 gi|407464099|ref|YP_006774981.1| - 0.32 10.8 8.8 0.35 10.7 6.1 1.0 1 0 0 1 1 1 0 Colicin V production protein NfeD PF01957.13 gi|407464099|ref|YP_006774981.1| - 0.5 10.5 6.6 0.6 10.2 4.6 1.0 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding DUF3671 PF12420.3 gi|407464099|ref|YP_006774981.1| - 0.66 9.9 4.8 0.84 9.6 3.3 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF2628 PF10947.3 gi|407464099|ref|YP_006774981.1| - 2.1 8.1 4.6 2.7 7.8 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Sensor PF13796.1 gi|407464099|ref|YP_006774981.1| - 4.1 6.9 7.9 6.8 6.2 5.5 1.3 1 1 0 1 1 1 0 Putative sensor DUF4212 PF13937.1 gi|407464099|ref|YP_006774981.1| - 7.9 6.5 8.0 9.8 6.2 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4212) Hexapep PF00132.19 gi|407464100|ref|YP_006774982.1| - 8.4e-29 97.8 9.7 3.2e-10 39.0 0.0 3.5 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|407464100|ref|YP_006774982.1| - 8e-20 70.1 5.5 3.3e-10 39.3 2.3 4.2 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase Trm112p PF03966.11 gi|407464101|ref|YP_006774983.1| - 7.4e-06 26.2 0.5 2.8e-05 24.3 0.1 2.1 2 1 0 2 2 2 1 Trm112p-like protein GFO_IDH_MocA PF01408.17 gi|407464102|ref|YP_006774984.1| - 1e-25 90.5 0.0 2e-25 89.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|407464102|ref|YP_006774984.1| - 2.9e-08 33.4 0.0 6.1e-08 32.4 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Peptidase_M73 PF12389.3 gi|407464102|ref|YP_006774984.1| - 0.0035 16.8 0.1 0.0054 16.2 0.1 1.3 1 0 0 1 1 1 1 Camelysin metallo-endopeptidase 2-Hacid_dh_C PF02826.14 gi|407464102|ref|YP_006774984.1| - 0.0081 15.3 0.0 0.018 14.1 0.0 1.7 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.19 gi|407464102|ref|YP_006774984.1| - 0.022 15.0 0.1 0.055 13.7 0.0 1.8 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain IlvN PF07991.7 gi|407464102|ref|YP_006774984.1| - 0.064 12.6 0.5 0.26 10.6 0.0 2.1 3 0 0 3 3 3 0 Acetohydroxy acid isomeroreductase, catalytic domain Aminotran_4 PF01063.14 gi|407464103|ref|YP_006774985.1| - 1.1e-42 146.1 0.0 1.3e-42 145.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class IV CTP_transf_2 PF01467.21 gi|407464104|ref|YP_006774986.1| - 3.3e-05 24.0 0.0 7.4e-05 22.8 0.0 1.5 1 1 0 1 1 1 1 Cytidylyltransferase NAD_binding_1 PF00175.16 gi|407464105|ref|YP_006774987.1| - 2.5e-13 50.5 0.0 5.5e-13 49.4 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.19 gi|407464105|ref|YP_006774987.1| - 8.4e-11 41.8 0.0 1.2e-10 41.3 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.7 gi|407464105|ref|YP_006774987.1| - 0.079 12.8 0.0 0.21 11.4 0.0 1.8 2 0 0 2 2 2 0 Ferric reductase NAD binding domain HEAT_2 PF13646.1 gi|407464106|ref|YP_006774988.1| - 6.7e-17 61.5 1.0 1.1e-10 41.6 0.3 2.1 2 0 0 2 2 2 2 HEAT repeats HEAT PF02985.17 gi|407464106|ref|YP_006774988.1| - 3.8e-10 38.9 0.1 0.059 13.4 0.0 3.9 4 0 0 4 4 4 3 HEAT repeat HEAT_EZ PF13513.1 gi|407464106|ref|YP_006774988.1| - 6.9e-09 35.9 1.3 0.11 13.0 0.0 3.4 3 1 0 3 3 3 3 HEAT-like repeat Cohesin_HEAT PF12765.2 gi|407464106|ref|YP_006774988.1| - 0.00026 20.8 2.7 0.088 12.7 0.1 3.6 4 0 0 4 4 4 1 HEAT repeat associated with sister chromatid cohesion Arm PF00514.18 gi|407464106|ref|YP_006774988.1| - 0.0021 17.7 0.0 0.073 12.9 0.0 2.7 3 0 0 3 3 3 1 Armadillo/beta-catenin-like repeat DUF2435 PF10363.4 gi|407464106|ref|YP_006774988.1| - 0.031 14.1 0.1 0.48 10.3 0.0 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2435) V-ATPase_H_C PF11698.3 gi|407464106|ref|YP_006774988.1| - 0.086 12.7 0.9 2.1 8.2 0.1 3.3 1 1 2 3 3 3 0 V-ATPase subunit H Sigma70_r1_1 PF03979.9 gi|407464106|ref|YP_006774988.1| - 0.21 11.5 7.2 0.23 11.3 0.4 2.6 2 1 0 2 2 2 0 Sigma-70 factor, region 1.1 HEAT_PBS PF03130.11 gi|407464106|ref|YP_006774988.1| - 0.45 11.1 2.8 2.3 8.9 0.0 3.1 4 0 0 4 4 4 0 PBS lyase HEAT-like repeat Alba PF01918.16 gi|407464107|ref|YP_006774989.1| - 1.5e-10 40.4 0.1 3.5e-09 36.1 0.1 2.3 2 0 0 2 2 2 1 Alba Waikav_capsid_1 PF12264.3 gi|407464107|ref|YP_006774989.1| - 0.097 11.9 0.0 0.099 11.9 0.0 1.2 1 0 0 1 1 1 0 Waikavirus capsid protein 1 Rpp20 PF12328.3 gi|407464107|ref|YP_006774989.1| - 0.14 11.8 0.5 5.5 6.6 0.0 2.1 1 1 1 2 2 2 0 Rpp20 subunit of nuclear RNase MRP and P PepSY_2 PF13670.1 gi|407464107|ref|YP_006774989.1| - 0.15 11.9 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain PEP_mutase PF13714.1 gi|407464108|ref|YP_006774990.1| - 2.5e-55 187.3 0.0 2.8e-55 187.1 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.16 gi|407464108|ref|YP_006774990.1| - 2e-17 62.6 0.1 6.2e-17 61.0 0.0 1.7 2 0 0 2 2 2 1 Isocitrate lyase family Pantoate_transf PF02548.10 gi|407464108|ref|YP_006774990.1| - 0.0071 15.4 0.2 0.54 9.3 0.0 2.9 2 1 1 3 3 3 1 Ketopantoate hydroxymethyltransferase Caldesmon PF02029.10 gi|407464108|ref|YP_006774990.1| - 0.032 12.6 0.5 0.044 12.2 0.4 1.1 1 0 0 1 1 1 0 Caldesmon HisG_C PF08029.6 gi|407464108|ref|YP_006774990.1| - 0.07 13.0 0.0 0.4 10.6 0.0 2.4 2 0 0 2 2 2 0 HisG, C-terminal domain PadR PF03551.9 gi|407464109|ref|YP_006774991.1| - 1.4e-11 43.9 0.1 3.1e-11 42.8 0.1 1.6 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|407464109|ref|YP_006774991.1| - 2.6e-06 27.1 0.5 1.4e-05 24.7 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix Mrr_N PF14338.1 gi|407464109|ref|YP_006774991.1| - 0.0029 17.6 0.0 0.034 14.2 0.0 2.3 2 0 0 2 2 2 1 Mrr N-terminal domain AphA_like PF14557.1 gi|407464109|ref|YP_006774991.1| - 0.064 12.8 0.0 0.089 12.3 0.0 1.4 1 1 0 1 1 1 0 Putative AphA-like transcriptional regulator HemN_C PF06969.11 gi|407464109|ref|YP_006774991.1| - 0.15 12.1 0.2 0.44 10.6 0.0 1.9 2 0 0 2 2 2 0 HemN C-terminal domain Motilin_ghrelin PF04644.7 gi|407464109|ref|YP_006774991.1| - 0.16 11.8 1.2 0.28 11.0 0.8 1.4 1 0 0 1 1 1 0 Motilin/ghrelin DUF1451 PF07295.6 gi|407464109|ref|YP_006774991.1| - 0.75 9.5 3.7 2.8 7.6 0.4 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF1451) FAD_binding_2 PF00890.19 gi|407464110|ref|YP_006774992.1| - 1.5e-97 327.1 0.3 1.9e-97 326.8 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.15 gi|407464110|ref|YP_006774992.1| - 1e-38 132.1 0.7 1.6e-38 131.4 0.5 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.9 gi|407464110|ref|YP_006774992.1| - 4.3e-06 26.7 4.5 0.0011 18.8 0.7 3.6 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|407464110|ref|YP_006774992.1| - 0.00013 21.1 0.8 0.00079 18.6 0.6 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.17 gi|407464110|ref|YP_006774992.1| - 0.0038 16.1 1.7 0.037 12.9 1.2 2.2 1 1 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.12 gi|407464110|ref|YP_006774992.1| - 0.0043 16.1 0.5 0.017 14.2 0.1 2.1 2 0 0 2 2 2 1 Thi4 family DAO PF01266.19 gi|407464110|ref|YP_006774992.1| - 0.0066 15.3 0.0 0.17 10.7 0.0 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.7 gi|407464110|ref|YP_006774992.1| - 0.038 12.9 0.2 0.068 12.0 0.2 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein HI0933_like PF03486.9 gi|407464110|ref|YP_006774992.1| - 0.045 12.2 0.3 2.2 6.6 0.1 2.6 3 0 0 3 3 3 0 HI0933-like protein Sdh_cyt PF01127.17 gi|407464111|ref|YP_006774993.1| - 2e-08 34.0 3.9 3.5e-08 33.3 2.3 1.6 1 1 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Flavi_M PF01004.14 gi|407464111|ref|YP_006774993.1| - 0.49 9.8 1.8 0.55 9.6 0.0 1.9 3 0 0 3 3 3 0 Flavivirus envelope glycoprotein M DDE_Tnp_1_2 PF13586.1 gi|407464111|ref|YP_006774993.1| - 0.55 10.4 2.3 0.89 9.7 0.0 2.3 3 0 0 3 3 3 0 Transposase DDE domain Sdh_cyt PF01127.17 gi|407464112|ref|YP_006774994.1| - 3.5e-08 33.3 3.1 4.4e-08 32.9 2.1 1.2 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Cytochrom_B_N_2 PF13631.1 gi|407464112|ref|YP_006774994.1| - 0.02 14.6 0.7 0.029 14.1 0.5 1.2 1 0 0 1 1 1 0 Cytochrome b(N-terminal)/b6/petB DUF4405 PF14358.1 gi|407464112|ref|YP_006774994.1| - 0.057 13.5 2.7 0.3 11.2 0.4 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4405) Ferric_reduct PF01794.14 gi|407464112|ref|YP_006774994.1| - 0.13 12.3 3.1 0.16 12.0 2.1 1.3 1 1 0 1 1 1 0 Ferric reductase like transmembrane component CcmD PF04995.9 gi|407464112|ref|YP_006774994.1| - 3.3 7.5 6.7 5.2 6.8 0.3 2.6 3 0 0 3 3 3 0 Heme exporter protein D (CcmD) Fer2_3 PF13085.1 gi|407464113|ref|YP_006774995.1| - 3.1e-30 104.2 0.0 6.1e-30 103.2 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.1 gi|407464113|ref|YP_006774995.1| - 4.3e-12 45.8 4.7 9.8e-12 44.7 1.6 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|407464113|ref|YP_006774995.1| - 6.6e-11 42.4 5.3 5e-09 36.4 0.2 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|407464113|ref|YP_006774995.1| - 1.1e-08 35.2 2.3 1.1e-08 35.2 1.6 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|407464113|ref|YP_006774995.1| - 1.1e-08 35.2 1.3 1.1e-08 35.2 0.9 2.1 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|407464113|ref|YP_006774995.1| - 2.7e-08 33.4 2.5 2.7e-08 33.4 1.7 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|407464113|ref|YP_006774995.1| - 2.9e-08 33.9 14.4 9.4e-07 29.1 3.4 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer2 PF00111.22 gi|407464113|ref|YP_006774995.1| - 0.00012 21.7 1.6 0.00015 21.4 0.1 1.9 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4 PF00037.22 gi|407464113|ref|YP_006774995.1| - 0.00013 21.3 1.6 0.00013 21.3 1.1 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|407464113|ref|YP_006774995.1| - 0.00017 21.2 1.7 0.00017 21.2 1.2 3.3 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_16 PF13484.1 gi|407464113|ref|YP_006774995.1| - 0.0011 19.6 4.3 0.0011 19.6 3.0 2.4 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|407464113|ref|YP_006774995.1| - 0.0059 16.4 2.1 0.0059 16.4 1.4 2.8 3 0 0 3 3 2 1 4Fe-4S binding domain Fer4_4 PF12800.2 gi|407464113|ref|YP_006774995.1| - 0.075 13.3 1.9 0.075 13.3 1.3 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|407464113|ref|YP_006774995.1| - 0.15 12.6 0.9 0.15 12.6 0.6 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_21 PF14697.1 gi|407464113|ref|YP_006774995.1| - 0.39 10.6 13.5 0.21 11.4 5.5 2.8 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|407464113|ref|YP_006774995.1| - 3.8 8.1 8.9 0.62 10.6 0.2 2.8 3 0 0 3 3 2 0 4Fe-4S single cluster domain DUF59 PF01883.14 gi|407464114|ref|YP_006774996.1| - 3.7e-14 52.4 0.1 5e-14 52.0 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF59 HMA PF00403.21 gi|407464114|ref|YP_006774996.1| - 0.099 12.8 0.8 0.9 9.7 0.0 2.2 2 0 0 2 2 2 0 Heavy-metal-associated domain Lyase_1 PF00206.15 gi|407464115|ref|YP_006774997.1| - 1.7e-52 178.5 0.1 3.5e-52 177.5 0.1 1.5 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.1 gi|407464115|ref|YP_006774997.1| - 5.9e-14 51.8 0.0 2.9e-12 46.4 0.0 2.8 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal UPF0093 PF03653.8 gi|407464115|ref|YP_006774997.1| - 0.1 12.5 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) Fzo_mitofusin PF04799.8 gi|407464116|ref|YP_006774998.1| - 0.1 11.9 1.0 0.24 10.7 0.0 2.0 2 0 0 2 2 2 0 fzo-like conserved region CENP-F_leu_zip PF10473.4 gi|407464116|ref|YP_006774998.1| - 0.19 11.5 25.0 4 7.3 0.1 2.3 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3782 PF12644.2 gi|407464116|ref|YP_006774998.1| - 0.34 10.7 0.0 0.34 10.7 0.0 3.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3782) FlaC_arch PF05377.6 gi|407464116|ref|YP_006774998.1| - 2.6 8.0 7.5 10 6.0 0.8 2.6 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) APG6 PF04111.7 gi|407464116|ref|YP_006774998.1| - 3.6 6.5 28.6 1.1 8.2 1.6 2.5 1 1 0 2 2 2 0 Autophagy protein Apg6 IncA PF04156.9 gi|407464116|ref|YP_006774998.1| - 4.5 6.8 14.5 0.44 10.1 0.3 2.6 2 1 1 3 3 3 0 IncA protein GlutR_N PF05201.10 gi|407464117|ref|YP_006774999.1| - 5.1e-30 104.0 0.0 7.4e-30 103.5 0.0 1.2 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.15 gi|407464117|ref|YP_006774999.1| - 1.1e-14 54.6 0.0 2.3e-14 53.6 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.12 gi|407464117|ref|YP_006774999.1| - 0.00012 22.4 0.0 0.00026 21.3 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.1 gi|407464117|ref|YP_006774999.1| - 0.032 14.4 0.0 0.075 13.3 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding TRSP PF12500.3 gi|407464117|ref|YP_006774999.1| - 0.069 12.6 0.0 0.19 11.2 0.0 1.8 2 0 0 2 2 2 0 TRSP domain C terminus to PRTase_2 DUF3779 PF12621.3 gi|407464117|ref|YP_006774999.1| - 0.095 12.5 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Phosphate metabolism protein HI0933_like PF03486.9 gi|407464117|ref|YP_006774999.1| - 0.12 10.7 0.1 0.36 9.2 0.1 1.8 1 1 2 3 3 3 0 HI0933-like protein DUF1059 PF06348.6 gi|407464118|ref|YP_006775000.1| - 7e-06 25.7 0.3 7.7e-06 25.6 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) NAD_binding_1 PF00175.16 gi|407464119|ref|YP_006775001.1| - 5e-13 49.5 0.0 1.1e-12 48.4 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.19 gi|407464119|ref|YP_006775001.1| - 2.6e-10 40.2 0.0 4.3e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.7 gi|407464119|ref|YP_006775001.1| - 0.011 15.6 0.0 0.014 15.2 0.0 1.5 1 1 0 1 1 1 0 Ferric reductase NAD binding domain Inositol_P PF00459.20 gi|407464120|ref|YP_006775002.1| - 8.5e-31 107.2 0.0 9.1e-31 107.1 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.15 gi|407464120|ref|YP_006775002.1| - 4.1e-06 25.8 0.1 7.6e-06 24.9 0.0 1.4 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase DUF1551 PF07585.6 gi|407464120|ref|YP_006775002.1| - 0.11 11.3 0.1 0.16 10.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1551) AAA PF00004.24 gi|407464122|ref|YP_006775004.1| - 1.2e-13 51.3 0.0 2.8e-13 50.2 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 gi|407464122|ref|YP_006775004.1| - 2.1e-09 36.5 0.8 7.1e-05 21.6 0.0 2.3 2 1 0 2 2 2 2 Rad17 cell cycle checkpoint protein RuvB_N PF05496.7 gi|407464122|ref|YP_006775004.1| - 5.8e-08 32.0 0.0 1.1e-07 31.1 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus TIP49 PF06068.8 gi|407464122|ref|YP_006775004.1| - 7e-06 25.0 0.1 2.2e-05 23.3 0.0 1.7 2 0 0 2 2 2 1 TIP49 C-terminus AAA_17 PF13207.1 gi|407464122|ref|YP_006775004.1| - 1.4e-05 25.8 0.3 4.2e-05 24.3 0.0 1.9 2 1 0 2 2 1 1 AAA domain AAA_14 PF13173.1 gi|407464122|ref|YP_006775004.1| - 0.0001 22.1 0.1 0.00024 21.0 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|407464122|ref|YP_006775004.1| - 0.00064 19.8 0.0 0.045 13.8 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.9 gi|407464122|ref|YP_006775004.1| - 0.0051 16.7 0.0 0.0095 15.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) NTPase_1 PF03266.10 gi|407464122|ref|YP_006775004.1| - 0.0057 16.3 0.0 0.02 14.6 0.0 1.9 1 1 1 2 2 2 1 NTPase AAA_5 PF07728.9 gi|407464122|ref|YP_006775004.1| - 0.0059 16.3 0.0 0.013 15.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.16 gi|407464122|ref|YP_006775004.1| - 0.006 15.7 0.1 0.015 14.4 0.0 1.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.1 gi|407464122|ref|YP_006775004.1| - 0.0063 16.2 0.0 0.013 15.2 0.0 1.5 1 0 0 1 1 1 1 Part of AAA domain AAA_18 PF13238.1 gi|407464122|ref|YP_006775004.1| - 0.0087 16.3 0.0 0.029 14.6 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|407464122|ref|YP_006775004.1| - 0.0089 15.9 0.0 0.017 15.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain NB-ARC PF00931.17 gi|407464122|ref|YP_006775004.1| - 0.013 14.4 0.0 0.022 13.5 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_16 PF13191.1 gi|407464122|ref|YP_006775004.1| - 0.015 15.3 0.0 0.026 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain Zeta_toxin PF06414.7 gi|407464122|ref|YP_006775004.1| - 0.027 13.5 0.0 0.047 12.7 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin IstB_IS21 PF01695.12 gi|407464122|ref|YP_006775004.1| - 0.03 13.7 0.0 0.056 12.8 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_11 PF13086.1 gi|407464122|ref|YP_006775004.1| - 0.04 13.5 0.0 0.099 12.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|407464122|ref|YP_006775004.1| - 0.044 13.9 0.0 0.12 12.5 0.0 1.8 1 0 0 1 1 1 0 RNA helicase Sigma54_activ_2 PF14532.1 gi|407464122|ref|YP_006775004.1| - 0.067 13.2 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_tran PF00005.22 gi|407464122|ref|YP_006775004.1| - 0.14 12.4 0.4 0.69 10.2 0.0 2.4 1 1 1 2 2 2 0 ABC transporter Carboxyl_trans PF01039.17 gi|407464124|ref|YP_006775006.1| - 1.3e-186 620.8 0.1 1.4e-186 620.6 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.6 gi|407464124|ref|YP_006775006.1| - 1.7e-06 27.3 0.0 4e-06 26.2 0.0 1.6 2 0 0 2 2 2 1 Malonate decarboxylase gamma subunit (MdcE) CPSase_L_D2 PF02786.12 gi|407464125|ref|YP_006775007.1| - 4.7e-69 231.8 0.0 7.5e-69 231.2 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|407464125|ref|YP_006775007.1| - 6e-43 145.4 0.1 1.1e-42 144.5 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain Biotin_carb_C PF02785.14 gi|407464125|ref|YP_006775007.1| - 9.8e-33 112.3 0.0 2.4e-32 111.0 0.0 1.7 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp_4 PF13535.1 gi|407464125|ref|YP_006775007.1| - 1.2e-18 67.4 0.0 2.5e-18 66.4 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|407464125|ref|YP_006775007.1| - 2e-12 46.5 0.0 4e-07 29.0 0.0 2.1 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.17 gi|407464125|ref|YP_006775007.1| - 5.6e-11 42.0 0.0 1.2e-10 40.9 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.6 gi|407464125|ref|YP_006775007.1| - 1.9e-09 37.2 0.0 7.2e-08 32.1 0.0 2.5 2 1 1 3 3 3 1 RimK-like ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|407464125|ref|YP_006775007.1| - 2.8e-07 30.1 0.1 1e-06 28.2 0.1 1.8 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.9 gi|407464125|ref|YP_006775007.1| - 1.4e-06 28.2 0.0 3.3e-06 27.0 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|407464125|ref|YP_006775007.1| - 0.03 13.8 0.2 0.069 12.7 0.0 1.7 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_ST PF14397.1 gi|407464125|ref|YP_006775007.1| - 0.067 12.2 0.0 0.23 10.5 0.0 1.8 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp Biotin_lipoyl PF00364.17 gi|407464126|ref|YP_006775008.1| - 1.1e-16 60.2 6.9 1.1e-16 60.2 4.8 1.7 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.1 gi|407464126|ref|YP_006775008.1| - 9.6e-15 53.9 2.2 7e-10 38.4 0.0 2.5 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD PF00529.15 gi|407464126|ref|YP_006775008.1| - 3.5e-07 29.8 1.6 6.9e-05 22.3 0.0 2.1 1 1 1 2 2 2 2 HlyD family secretion protein HlyD_3 PF13437.1 gi|407464126|ref|YP_006775008.1| - 0.00014 22.1 1.6 0.31 11.4 0.1 2.8 3 0 0 3 3 3 2 HlyD family secretion protein HlyD_2 PF12700.2 gi|407464126|ref|YP_006775008.1| - 0.001 18.2 0.2 0.001 18.2 0.1 3.1 1 1 1 3 3 3 2 HlyD family secretion protein RnfC_N PF13375.1 gi|407464126|ref|YP_006775008.1| - 0.0012 18.4 2.2 0.0026 17.4 1.5 1.6 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain DUF2118 PF09891.4 gi|407464126|ref|YP_006775008.1| - 0.0033 17.1 0.4 0.0033 17.1 0.3 1.9 2 1 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2118) QRPTase_N PF02749.11 gi|407464126|ref|YP_006775008.1| - 0.0038 17.0 0.3 0.1 12.4 0.0 2.3 1 1 1 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain Peptidase_M23 PF01551.17 gi|407464126|ref|YP_006775008.1| - 0.0079 16.2 2.2 0.3 11.1 0.0 3.0 2 1 1 3 3 3 1 Peptidase family M23 PASTA PF03793.14 gi|407464126|ref|YP_006775008.1| - 0.016 14.7 1.1 0.083 12.5 0.1 2.3 2 0 0 2 2 2 0 PASTA domain GCV_H PF01597.14 gi|407464126|ref|YP_006775008.1| - 0.018 14.7 1.8 0.038 13.6 0.9 1.8 1 1 1 2 2 2 0 Glycine cleavage H-protein PYNP_C PF07831.8 gi|407464126|ref|YP_006775008.1| - 0.042 13.3 0.7 0.3 10.5 0.1 2.3 1 1 1 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain PTS_EIIA_1 PF00358.15 gi|407464126|ref|YP_006775008.1| - 0.048 13.2 0.8 0.1 12.1 0.1 1.9 2 1 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PDZ_2 PF13180.1 gi|407464126|ref|YP_006775008.1| - 1.2 9.0 4.9 4.4 7.2 0.3 2.9 2 1 1 3 3 3 0 PDZ domain AhpC-TSA PF00578.16 gi|407464127|ref|YP_006775009.1| - 3.1e-32 110.8 0.0 3.6e-32 110.6 0.0 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|407464127|ref|YP_006775009.1| - 6.6e-21 74.3 0.0 7.6e-21 74.1 0.0 1.0 1 0 0 1 1 1 1 Redoxin DUF899 PF05988.7 gi|407464127|ref|YP_006775009.1| - 0.045 13.1 0.0 0.05 13.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) SCO1-SenC PF02630.9 gi|407464127|ref|YP_006775009.1| - 0.05 13.2 0.1 0.081 12.5 0.0 1.4 1 1 0 1 1 1 0 SCO1/SenC AhpC-TSA_2 PF13911.1 gi|407464127|ref|YP_006775009.1| - 0.11 12.3 0.0 0.56 10.1 0.0 1.9 2 0 0 2 2 2 0 AhpC/TSA antioxidant enzyme Oxidored_q4 PF00507.14 gi|407464128|ref|YP_006775010.1| - 2.7e-15 56.0 1.1 3.4e-15 55.7 0.8 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Oxidored_q6 PF01058.17 gi|407464129|ref|YP_006775011.1| - 4.7e-25 87.7 0.1 6.5e-25 87.2 0.1 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.14 gi|407464130|ref|YP_006775012.1| - 3.7e-27 94.5 0.2 1.4e-26 92.6 0.1 1.8 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Complex1_49kDa PF00346.14 gi|407464131|ref|YP_006775013.1| - 4.5e-59 199.6 0.0 2.6e-46 157.8 0.0 2.3 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DUF3195 PF11424.3 gi|407464131|ref|YP_006775013.1| - 0.11 12.6 0.8 0.89 9.7 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3195) NADHdh PF00146.16 gi|407464132|ref|YP_006775014.1| - 6.7e-80 268.4 12.3 7.5e-80 268.2 8.1 1.4 1 1 0 1 1 1 1 NADH dehydrogenase Fer4 PF00037.22 gi|407464133|ref|YP_006775015.1| - 6.3e-12 44.5 10.8 2.6e-09 36.2 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|407464133|ref|YP_006775015.1| - 4e-10 39.3 17.9 3e-07 30.1 6.8 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|407464133|ref|YP_006775015.1| - 1.1e-09 38.4 9.5 1.9e-09 37.7 6.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|407464133|ref|YP_006775015.1| - 1.1e-08 34.8 20.2 3.5e-06 26.7 7.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|407464133|ref|YP_006775015.1| - 2.5e-08 33.3 10.5 6.8e-05 22.5 1.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|407464133|ref|YP_006775015.1| - 4.9e-07 29.9 8.9 8.5e-07 29.1 6.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|407464133|ref|YP_006775015.1| - 2.9e-06 27.1 18.0 0.00012 21.9 6.9 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|407464133|ref|YP_006775015.1| - 5.1e-06 26.7 7.4 0.0035 17.6 0.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|407464133|ref|YP_006775015.1| - 5.1e-06 26.1 1.8 5.1e-06 26.1 1.2 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_4 PF12800.2 gi|407464133|ref|YP_006775015.1| - 1.6e-05 24.8 8.3 0.0024 18.0 0.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|407464133|ref|YP_006775015.1| - 1.9e-05 25.2 18.1 0.00057 20.5 6.8 1.8 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|407464133|ref|YP_006775015.1| - 0.00036 21.0 4.4 0.093 13.3 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|407464133|ref|YP_006775015.1| - 0.0023 18.2 4.6 0.23 11.8 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|407464133|ref|YP_006775015.1| - 0.0031 17.9 17.3 0.0057 17.1 2.8 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.1 gi|407464133|ref|YP_006775015.1| - 0.0031 17.8 11.5 0.0061 16.9 0.8 2.3 1 1 1 2 2 2 1 4Fe-4S dicluster domain DUF2607 PF10795.4 gi|407464133|ref|YP_006775015.1| - 0.041 13.7 0.2 0.071 12.9 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2607) Oxidored_q3 PF00499.15 gi|407464134|ref|YP_006775016.1| - 1.8e-20 73.1 6.1 2.2e-20 72.8 4.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF4040 PF13244.1 gi|407464134|ref|YP_006775016.1| - 0.0033 17.3 10.0 0.0033 17.3 6.9 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4040) MIG-14_Wnt-bd PF06664.7 gi|407464134|ref|YP_006775016.1| - 0.005 15.7 0.8 0.0064 15.3 0.6 1.2 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion NfeD PF01957.13 gi|407464134|ref|YP_006775016.1| - 1.9 8.6 14.7 0.21 11.7 6.3 2.0 1 1 0 2 2 2 0 NfeD-like C-terminal, partner-binding DUF4389 PF14333.1 gi|407464134|ref|YP_006775016.1| - 5.2 6.8 6.4 29 4.4 2.5 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4389) UPF0104 PF03706.8 gi|407464134|ref|YP_006775016.1| - 7.1 5.8 16.9 0.5 9.5 6.3 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0104) Oxidored_q2 PF00420.19 gi|407464135|ref|YP_006775017.1| - 4.7e-23 80.6 4.4 5.6e-23 80.3 3.1 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Gram_pos_anchor PF00746.16 gi|407464135|ref|YP_006775017.1| - 2 8.3 8.6 4.1 7.3 0.3 2.7 3 1 0 3 3 3 0 Gram positive anchor Oxidored_q1 PF00361.15 gi|407464136|ref|YP_006775018.1| - 3e-63 213.6 23.1 3e-63 213.6 16.0 2.5 3 0 0 3 3 3 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|407464136|ref|YP_006775018.1| - 0.015 14.8 0.1 0.015 14.8 0.0 2.5 3 0 0 3 3 3 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Microcin PF03526.8 gi|407464136|ref|YP_006775018.1| - 0.018 14.6 0.0 0.058 12.9 0.0 1.9 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein Oxidored_q1 PF00361.15 gi|407464137|ref|YP_006775019.1| - 1.5e-56 191.6 28.6 8.8e-52 176.0 12.2 3.7 3 1 1 4 4 4 2 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|407464137|ref|YP_006775019.1| - 7e-11 41.5 1.8 7e-11 41.5 1.3 2.4 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q1_C PF01010.14 gi|407464137|ref|YP_006775019.1| - 0.0014 18.2 0.4 0.016 14.7 0.1 2.2 1 1 1 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I) subunit C-terminus Oxidored_q2 PF00420.19 gi|407464137|ref|YP_006775019.1| - 0.012 15.2 1.9 0.012 15.2 1.3 4.5 5 1 0 5 5 5 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Oxidored_q1 PF00361.15 gi|407464138|ref|YP_006775020.1| - 1.7e-61 207.8 22.8 1.7e-61 207.8 15.8 2.8 3 0 0 3 3 3 2 NADH-Ubiquinone/plastoquinone (complex I), various chains Bac_luciferase PF00296.15 gi|407464138|ref|YP_006775020.1| - 0.12 11.4 0.1 0.19 10.8 0.1 1.2 1 0 0 1 1 1 0 Luciferase-like monooxygenase polyprenyl_synt PF00348.12 gi|407464139|ref|YP_006775021.1| - 2.2e-42 144.6 0.1 3.3e-42 144.1 0.1 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase TENA_THI-4 PF03070.11 gi|407464140|ref|YP_006775022.1| - 1.1e-14 54.6 0.4 1.3e-14 54.4 0.3 1.1 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Haem_oxygenas_2 PF14518.1 gi|407464140|ref|YP_006775022.1| - 3.6e-08 33.5 0.0 7.1e-07 29.3 0.0 2.2 1 1 1 2 2 2 1 Iron-containing redox enzyme AsnC_trans_reg PF01037.16 gi|407464142|ref|YP_006775024.1| - 0.073 12.7 0.1 0.082 12.6 0.1 1.1 1 0 0 1 1 1 0 AsnC family Glyco_hydro_3_C PF01915.17 gi|407464142|ref|YP_006775024.1| - 0.11 11.9 0.1 0.12 11.8 0.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain TMPIT PF07851.8 gi|407464143|ref|YP_006775025.1| - 0.015 14.3 11.2 0.017 14.1 7.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF948 PF06103.6 gi|407464143|ref|YP_006775025.1| - 0.052 13.4 6.4 0.045 13.6 3.3 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Vps51 PF08700.6 gi|407464143|ref|YP_006775025.1| - 0.054 13.3 8.4 0.097 12.5 5.7 1.7 1 1 0 1 1 1 0 Vps51/Vps67 Prominin PF05478.6 gi|407464143|ref|YP_006775025.1| - 0.07 10.6 6.6 0.076 10.5 4.6 1.1 1 0 0 1 1 1 0 Prominin CCP_MauG PF03150.9 gi|407464143|ref|YP_006775025.1| - 0.18 12.0 3.9 0.2 11.9 2.7 1.1 1 0 0 1 1 1 0 Di-haem cytochrome c peroxidase Syntaxin-6_N PF09177.6 gi|407464143|ref|YP_006775025.1| - 0.25 11.7 10.3 0.59 10.5 7.1 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Prefoldin PF02996.12 gi|407464143|ref|YP_006775025.1| - 0.47 10.1 14.4 0.62 9.7 2.6 2.1 2 0 0 2 2 2 0 Prefoldin subunit V_ATPase_I PF01496.14 gi|407464143|ref|YP_006775025.1| - 0.78 7.5 12.5 0.81 7.4 8.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family OEP PF02321.13 gi|407464143|ref|YP_006775025.1| - 1 8.9 15.1 0.87 9.1 10.0 1.3 1 1 0 1 1 1 0 Outer membrane efflux protein DUF87 PF01935.12 gi|407464143|ref|YP_006775025.1| - 1.1 9.0 9.1 1.3 8.7 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF87 APG6 PF04111.7 gi|407464143|ref|YP_006775025.1| - 1.4 7.8 13.0 1.7 7.6 9.0 1.0 1 0 0 1 1 1 0 Autophagy protein Apg6 AAA_13 PF13166.1 gi|407464143|ref|YP_006775025.1| - 3.1 6.1 17.6 3.4 5.9 12.2 1.1 1 0 0 1 1 1 0 AAA domain Fib_alpha PF08702.5 gi|407464143|ref|YP_006775025.1| - 3.6 7.7 12.2 7.1 6.7 8.4 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Spc7 PF08317.6 gi|407464143|ref|YP_006775025.1| - 3.7 6.1 17.5 4.2 5.9 12.1 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein ISG65-75 PF11727.3 gi|407464143|ref|YP_006775025.1| - 4.7 6.1 22.0 11 5.0 15.0 1.6 1 1 0 1 1 1 0 Invariant surface glycoprotein Effector_1 PF04518.7 gi|407464143|ref|YP_006775025.1| - 4.9 6.0 13.1 5.8 5.8 9.1 1.1 1 0 0 1 1 1 0 Effector from type III secretion system RNA_pol_Rpb1_4 PF05000.12 gi|407464143|ref|YP_006775025.1| - 6.4 6.5 9.8 4.6 7.0 4.5 2.2 1 1 1 2 2 2 0 RNA polymerase Rpb1, domain 4 Plasmid_RAQPRD PF09686.5 gi|407464143|ref|YP_006775025.1| - 9 6.4 10.5 19 5.4 2.1 2.4 1 1 1 2 2 2 0 Plasmid protein of unknown function (Plasmid_RAQPRD) zf-CDGSH PF09360.5 gi|407464144|ref|YP_006775026.1| - 8.5e-15 54.3 0.2 1e-14 54.0 0.2 1.1 1 0 0 1 1 1 1 Iron-binding zinc finger CDGSH type AsnC_trans_reg PF01037.16 gi|407464148|ref|YP_006775030.1| - 0.00041 19.9 0.0 0.00052 19.6 0.0 1.1 1 0 0 1 1 1 1 AsnC family MS_channel PF00924.13 gi|407464150|ref|YP_006775032.1| - 2.5e-16 59.6 1.5 3.7e-16 59.0 1.0 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel Holin_LLH PF09682.5 gi|407464150|ref|YP_006775032.1| - 0.11 12.6 0.8 0.2 11.8 0.1 1.8 2 0 0 2 2 2 0 Phage holin protein (Holin_LLH) DUF1270 PF06900.6 gi|407464150|ref|YP_006775032.1| - 0.86 9.7 5.8 0.24 11.5 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1270) Colicin_V PF02674.11 gi|407464150|ref|YP_006775032.1| - 3.9 7.3 10.7 3.4 7.4 1.0 2.2 1 1 1 2 2 2 0 Colicin V production protein Pribosyltran PF00156.22 gi|407464151|ref|YP_006775033.1| - 1.4e-14 53.8 0.5 2.8e-14 52.9 0.4 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.1 gi|407464151|ref|YP_006775033.1| - 0.00064 19.0 0.1 0.0011 18.2 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase UPRTase PF14681.1 gi|407464151|ref|YP_006775033.1| - 0.0013 17.9 0.1 0.0017 17.5 0.1 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Hydantoinase_A PF01968.13 gi|407464151|ref|YP_006775033.1| - 0.025 13.6 0.1 1.1 8.3 0.0 2.1 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase Peptidase_M50 PF02163.17 gi|407464153|ref|YP_006775035.1| - 8.5e-17 60.7 8.1 1.1e-15 57.0 4.6 2.7 2 1 0 2 2 2 1 Peptidase family M50 Acetyltransf_1 PF00583.19 gi|407464154|ref|YP_006775036.1| - 2.1e-17 62.9 0.2 3.2e-17 62.3 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|407464154|ref|YP_006775036.1| - 8.3e-10 38.8 0.0 1.2e-09 38.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|407464154|ref|YP_006775036.1| - 1.3e-09 37.6 0.2 4.7e-09 35.8 0.0 1.8 1 1 1 2 2 2 1 FR47-like protein Acetyltransf_7 PF13508.1 gi|407464154|ref|YP_006775036.1| - 1.6e-09 37.8 0.4 2.4e-09 37.2 0.3 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|407464154|ref|YP_006775036.1| - 7.9e-07 29.0 0.0 1.5e-06 28.1 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|407464154|ref|YP_006775036.1| - 0.00021 21.4 0.1 0.00036 20.7 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|407464154|ref|YP_006775036.1| - 0.0003 20.7 0.1 0.00047 20.1 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|407464154|ref|YP_006775036.1| - 0.00089 19.1 0.0 0.0028 17.5 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.2 gi|407464154|ref|YP_006775036.1| - 0.0022 16.8 0.1 0.0027 16.5 0.1 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_CG PF14542.1 gi|407464154|ref|YP_006775036.1| - 0.033 14.0 0.0 0.075 12.9 0.0 1.6 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase DUF1469 PF07332.6 gi|407464155|ref|YP_006775037.1| - 0.051 13.3 2.3 0.058 13.1 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) DUF2613 PF11021.3 gi|407464155|ref|YP_006775037.1| - 0.14 11.8 0.3 0.19 11.4 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) Met_10 PF02475.11 gi|407464156|ref|YP_006775038.1| - 2.8e-62 209.8 0.2 3.4e-62 209.6 0.2 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_26 PF13659.1 gi|407464156|ref|YP_006775038.1| - 3.4e-05 23.8 0.0 6.4e-05 22.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|407464156|ref|YP_006775038.1| - 0.00011 21.4 0.1 0.00017 20.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TRM PF02005.11 gi|407464156|ref|YP_006775038.1| - 0.00037 19.5 0.1 0.00046 19.2 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_18 PF12847.2 gi|407464156|ref|YP_006775038.1| - 0.00043 20.8 0.0 0.00081 19.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|407464156|ref|YP_006775038.1| - 0.0025 17.3 0.0 0.0045 16.5 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.9 gi|407464156|ref|YP_006775038.1| - 0.0033 16.8 0.0 0.006 15.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.10 gi|407464156|ref|YP_006775038.1| - 0.0068 15.8 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 ABC_tran PF00005.22 gi|407464157|ref|YP_006775039.1| - 1.9e-39 135.0 0.5 1.3e-18 67.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter RLI PF04068.10 gi|407464157|ref|YP_006775039.1| - 1.1e-10 40.9 1.4 1.1e-10 40.9 1.0 1.8 2 0 0 2 2 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Fer4_6 PF12837.2 gi|407464157|ref|YP_006775039.1| - 6.3e-10 38.4 13.2 6.3e-08 32.1 3.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|407464157|ref|YP_006775039.1| - 1.9e-09 36.7 11.7 5.2e-09 35.3 4.1 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain SMC_N PF02463.14 gi|407464157|ref|YP_006775039.1| - 4.6e-08 32.5 7.7 0.0027 16.9 0.6 3.3 2 2 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|407464157|ref|YP_006775039.1| - 1.3e-07 31.9 9.5 0.57 10.0 0.0 4.6 3 2 2 5 5 5 3 AAA domain Fer4_2 PF12797.2 gi|407464157|ref|YP_006775039.1| - 3.4e-06 26.6 11.9 7.8e-06 25.5 2.4 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.2 gi|407464157|ref|YP_006775039.1| - 5.2e-06 26.7 12.3 1.3e-05 25.4 8.6 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|407464157|ref|YP_006775039.1| - 2.8e-05 23.8 13.2 4.8e-05 23.1 9.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain DUF258 PF03193.11 gi|407464157|ref|YP_006775039.1| - 3.7e-05 22.9 0.1 0.012 14.7 0.0 2.8 3 0 0 3 3 2 1 Protein of unknown function, DUF258 Fer4_10 PF13237.1 gi|407464157|ref|YP_006775039.1| - 0.00011 21.8 25.8 0.00038 20.1 1.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_15 PF13175.1 gi|407464157|ref|YP_006775039.1| - 0.00032 19.8 0.7 1.4 7.8 0.0 3.8 3 1 1 4 4 4 1 AAA ATPase domain AAA_29 PF13555.1 gi|407464157|ref|YP_006775039.1| - 0.00037 19.9 0.2 0.062 12.8 0.0 2.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain SbcCD_C PF13558.1 gi|407464157|ref|YP_006775039.1| - 0.0019 18.0 0.4 2.3 8.1 0.1 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit Fer4_3 PF12798.2 gi|407464157|ref|YP_006775039.1| - 0.0025 18.2 5.4 0.0025 18.2 3.7 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_9 PF13187.1 gi|407464157|ref|YP_006775039.1| - 0.0035 17.5 11.9 0.0077 16.4 8.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_16 PF13191.1 gi|407464157|ref|YP_006775039.1| - 0.0072 16.3 2.2 0.065 13.2 0.0 2.8 3 1 0 3 3 2 1 AAA ATPase domain NB-ARC PF00931.17 gi|407464157|ref|YP_006775039.1| - 0.0075 15.1 0.1 2.5 6.8 0.0 2.6 2 0 0 2 2 2 1 NB-ARC domain Miro PF08477.8 gi|407464157|ref|YP_006775039.1| - 0.0087 16.5 0.0 1.3 9.5 0.0 2.7 2 0 0 2 2 2 1 Miro-like protein Fer4_4 PF12800.2 gi|407464157|ref|YP_006775039.1| - 0.011 15.9 3.2 0.011 15.9 2.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.1 gi|407464157|ref|YP_006775039.1| - 0.015 15.3 5.2 0.033 14.2 3.6 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain AAA_25 PF13481.1 gi|407464157|ref|YP_006775039.1| - 0.025 13.9 0.3 1.7 7.9 0.0 2.6 2 0 0 2 2 2 0 AAA domain Fer4_15 PF13459.1 gi|407464157|ref|YP_006775039.1| - 0.028 14.9 2.0 0.028 14.9 1.4 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|407464157|ref|YP_006775039.1| - 0.051 14.3 13.4 0.37 11.5 9.3 2.2 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain MMR_HSR1 PF01926.18 gi|407464157|ref|YP_006775039.1| - 0.056 13.3 1.1 0.58 10.1 0.2 2.6 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_14 PF13173.1 gi|407464157|ref|YP_006775039.1| - 0.067 13.0 0.5 3 7.7 0.0 3.3 4 0 0 4 4 3 0 AAA domain AAA PF00004.24 gi|407464157|ref|YP_006775039.1| - 0.073 13.2 0.1 2.6 8.2 0.0 2.7 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Fer4_17 PF13534.1 gi|407464157|ref|YP_006775039.1| - 1.4 9.3 9.3 0.25 11.6 0.8 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain AAA_23 PF13476.1 gi|407464157|ref|YP_006775039.1| - 5.4 7.2 9.6 8.8 6.5 0.4 3.3 2 2 0 2 2 2 0 AAA domain Fer4_18 PF13746.1 gi|407464157|ref|YP_006775039.1| - 7.7 7.0 11.4 27 5.2 7.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Peptidase_M17 PF00883.16 gi|407464158|ref|YP_006775040.1| - 2.5e-114 381.3 0.1 3.6e-114 380.8 0.1 1.2 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.12 gi|407464158|ref|YP_006775040.1| - 9e-20 70.6 0.0 2.7e-19 69.1 0.0 1.8 1 0 0 1 1 1 1 Cytosol aminopeptidase family, N-terminal domain DUF393 PF04134.7 gi|407464159|ref|YP_006775041.1| - 0.009 17.1 0.0 0.014 16.4 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function, DUF393 CxxCxxCC PF03692.10 gi|407464160|ref|YP_006775042.1| - 2.8e-09 37.3 0.2 7.2e-09 35.9 0.1 1.7 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain DUF2054 PF10218.4 gi|407464160|ref|YP_006775042.1| - 0.047 13.5 3.0 2.5 7.9 0.7 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2054) Transketolase_N PF00456.16 gi|407464161|ref|YP_006775043.1| - 6.1e-53 179.7 0.4 2.6e-51 174.4 0.3 2.2 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Ribul_P_3_epim PF00834.14 gi|407464161|ref|YP_006775043.1| - 2.8e-51 173.5 0.1 4.3e-51 172.8 0.1 1.3 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family DXP_synthase_N PF13292.1 gi|407464161|ref|YP_006775043.1| - 3.3e-05 22.9 0.4 0.00029 19.8 0.1 2.3 2 1 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.15 gi|407464161|ref|YP_006775043.1| - 4.1e-05 22.4 0.0 6.7e-05 21.7 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.16 gi|407464161|ref|YP_006775043.1| - 0.0001 21.9 0.0 0.00027 20.5 0.0 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFP_N PF09364.5 gi|407464161|ref|YP_006775043.1| - 0.0023 16.5 1.6 0.0047 15.5 0.1 2.1 3 0 0 3 3 3 1 XFP N-terminal domain Transketolase_C PF02780.15 gi|407464162|ref|YP_006775044.1| - 4.7e-31 107.3 0.0 9e-31 106.3 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transket_pyr PF02779.19 gi|407464162|ref|YP_006775044.1| - 2.3e-30 105.4 0.0 3.2e-30 104.9 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transaldolase PF00923.14 gi|407464163|ref|YP_006775045.1| - 9.4e-62 208.7 0.0 3.3e-61 206.9 0.0 1.8 1 1 0 1 1 1 1 Transaldolase CorA PF01544.13 gi|407464165|ref|YP_006775047.1| - 4.5e-70 235.9 2.1 5.4e-70 235.7 1.5 1.1 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein DUF3566 PF12089.3 gi|407464165|ref|YP_006775047.1| - 0.086 12.8 1.2 0.13 12.2 0.1 1.8 1 1 1 2 2 2 0 Transmembrane domain of unknown function (DUF3566) DUF2397 PF09660.5 gi|407464165|ref|YP_006775047.1| - 0.12 10.9 0.2 0.18 10.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2397) CesA PF11439.3 gi|407464165|ref|YP_006775047.1| - 0.29 11.0 4.0 4.5 7.2 0.0 3.1 2 1 0 3 3 3 0 Type III secretion system filament chaperone CesA Osmo_CC PF08946.5 gi|407464165|ref|YP_006775047.1| - 1.6 8.8 6.9 3.3 7.7 0.1 3.3 3 0 0 3 3 3 0 Osmosensory transporter coiled coil DOT1 PF08123.8 gi|407464167|ref|YP_006775049.1| - 0.0018 17.6 0.6 0.12 11.6 0.4 2.4 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_31 PF13847.1 gi|407464167|ref|YP_006775049.1| - 0.004 16.7 1.5 0.006 16.1 1.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain CUB PF00431.15 gi|407464167|ref|YP_006775049.1| - 0.005 16.9 0.5 0.18 11.9 0.0 2.2 2 0 0 2 2 2 1 CUB domain Methyltransf_25 PF13649.1 gi|407464167|ref|YP_006775049.1| - 0.066 13.5 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain UPF0147 PF03685.8 gi|407464168|ref|YP_006775050.1| - 1.3e-32 111.5 1.7 1.4e-32 111.3 1.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UvrB PF12344.3 gi|407464168|ref|YP_006775050.1| - 0.03 13.8 2.0 1.4 8.4 0.2 2.3 2 0 0 2 2 2 0 Ultra-violet resistance protein B DUF3461 PF11944.3 gi|407464168|ref|YP_006775050.1| - 0.044 13.6 0.2 0.33 10.7 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3461) DUF1840 PF08895.6 gi|407464168|ref|YP_006775050.1| - 0.049 13.6 0.3 0.074 13.0 0.1 1.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1840) RPA PF10134.4 gi|407464168|ref|YP_006775050.1| - 0.076 12.2 0.0 0.097 11.9 0.0 1.1 1 0 0 1 1 1 0 Replication initiator protein A UPF0253 PF06786.7 gi|407464168|ref|YP_006775050.1| - 0.1 12.7 0.1 6.1 7.0 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) Rieske PF00355.21 gi|407464169|ref|YP_006775051.1| - 2.4e-17 62.2 0.0 2.9e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 gi|407464169|ref|YP_006775051.1| - 1.3e-08 34.5 0.0 1.5e-08 34.3 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Acetyltransf_1 PF00583.19 gi|407464170|ref|YP_006775052.1| - 2.2e-08 34.0 0.0 5.2e-08 32.8 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|407464170|ref|YP_006775052.1| - 2.8e-06 27.3 0.0 6.1e-06 26.3 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|407464170|ref|YP_006775052.1| - 0.022 14.9 0.0 0.044 13.9 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Gly_acyl_tr_C PF08444.5 gi|407464170|ref|YP_006775052.1| - 0.027 14.4 0.1 0.027 14.4 0.0 2.2 3 0 0 3 3 3 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region Acetyltransf_CG PF14542.1 gi|407464170|ref|YP_006775052.1| - 0.045 13.6 0.0 0.083 12.7 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.1 gi|407464170|ref|YP_006775052.1| - 0.13 12.4 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FPL PF09758.4 gi|407464170|ref|YP_006775052.1| - 3.3 7.4 9.7 1.3 8.8 4.1 2.0 1 1 1 2 2 2 0 Uncharacterised conserved protein FAA_hydrolase PF01557.13 gi|407464171|ref|YP_006775053.1| - 5.5e-66 222.1 0.0 7e-66 221.7 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.4 gi|407464171|ref|YP_006775053.1| - 0.0031 17.8 0.0 0.014 15.7 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF2437) tRNA-synt_1c PF00749.16 gi|407464172|ref|YP_006775054.1| - 1.9e-78 263.3 0.0 2.7e-78 262.7 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.13 gi|407464172|ref|YP_006775054.1| - 2.4e-23 82.6 1.2 4.2e-23 81.9 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain polyprenyl_synt PF00348.12 gi|407464173|ref|YP_006775055.1| - 2.3e-70 236.4 0.2 2.9e-70 236.0 0.1 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Terpene_synth_C PF03936.11 gi|407464173|ref|YP_006775055.1| - 0.0061 15.8 0.0 0.008 15.4 0.0 1.3 1 0 0 1 1 1 1 Terpene synthase family, metal binding domain NUDIX PF00293.23 gi|407464174|ref|YP_006775056.1| - 5.3e-10 39.0 0.0 7.9e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain AA_kinase PF00696.23 gi|407464175|ref|YP_006775057.1| - 5.9e-29 101.3 0.0 6.7e-29 101.1 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family DUF1967 PF09269.6 gi|407464175|ref|YP_006775057.1| - 0.04 13.5 0.1 0.78 9.4 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1967) GHMP_kinases_N PF00288.21 gi|407464176|ref|YP_006775058.1| - 2.2e-21 75.6 0.2 6.2e-21 74.2 0.1 1.8 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|407464176|ref|YP_006775058.1| - 1.6e-13 50.6 0.0 3.7e-13 49.4 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal Tubulin_C PF03953.12 gi|407464176|ref|YP_006775058.1| - 0.0021 18.1 0.3 0.28 11.2 0.0 2.8 3 0 0 3 3 3 1 Tubulin C-terminal domain HAP1_N PF04849.8 gi|407464176|ref|YP_006775058.1| - 0.0078 15.1 1.0 0.0078 15.1 0.7 1.7 2 0 0 2 2 2 1 HAP1 N-terminal conserved region DUF837 PF05769.6 gi|407464176|ref|YP_006775058.1| - 0.041 13.4 2.7 0.086 12.3 1.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF837) I_LWEQ PF01608.12 gi|407464176|ref|YP_006775058.1| - 0.055 13.4 0.7 0.11 12.3 0.5 1.5 1 0 0 1 1 1 0 I/LWEQ domain Ribosomal_S2 PF00318.15 gi|407464177|ref|YP_006775059.1| - 8.4e-35 119.9 0.3 9.7e-31 106.6 0.2 2.0 1 1 0 1 1 1 1 Ribosomal protein S2 AP_endonuc_2 PF01261.19 gi|407464177|ref|YP_006775059.1| - 0.043 13.0 0.0 0.061 12.6 0.0 1.2 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Enolase_C PF00113.17 gi|407464178|ref|YP_006775060.1| - 4.9e-57 193.1 0.1 6.6e-57 192.7 0.1 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.11 gi|407464178|ref|YP_006775060.1| - 6.1e-26 90.9 0.0 1.2e-25 89.9 0.0 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain CW_binding_2 PF04122.7 gi|407464178|ref|YP_006775060.1| - 9.3e-05 22.5 4.6 0.00012 22.2 0.4 2.9 4 0 0 4 4 4 1 Putative cell wall binding repeat 2 RNA_pol_N PF01194.12 gi|407464179|ref|YP_006775061.1| - 5.3e-28 96.8 0.6 6.6e-28 96.5 0.4 1.1 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.7 gi|407464179|ref|YP_006775061.1| - 0.049 13.7 1.3 0.13 12.3 0.9 1.7 1 1 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Translin PF01997.11 gi|407464180|ref|YP_006775062.1| - 4.8e-30 104.6 5.7 6.4e-30 104.2 4.0 1.2 1 0 0 1 1 1 1 Translin family Ribonuc_red_lgN PF00317.16 gi|407464180|ref|YP_006775062.1| - 0.11 12.3 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain YjeF_N PF03853.10 gi|407464181|ref|YP_006775063.1| - 4e-49 166.4 0.0 4.6e-49 166.2 0.0 1.0 1 0 0 1 1 1 1 YjeF-related protein N-terminus Lactamase_B PF00753.22 gi|407464182|ref|YP_006775064.1| - 3.5e-27 95.3 0.4 4.8e-27 94.8 0.2 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|407464182|ref|YP_006775064.1| - 1.5e-05 24.6 1.0 2.2e-05 24.0 0.7 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|407464182|ref|YP_006775064.1| - 0.053 13.2 0.5 0.068 12.8 0.3 1.4 1 1 0 1 1 1 0 Beta-lactamase superfamily domain DBI_PRT PF02277.12 gi|407464183|ref|YP_006775065.1| - 2.8e-27 95.6 0.1 4.2e-27 95.1 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyltransferase SIS PF01380.17 gi|407464184|ref|YP_006775066.1| - 4.9e-45 152.3 2.7 2.2e-25 88.7 0.8 2.4 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.1 gi|407464184|ref|YP_006775066.1| - 9.3e-25 87.1 0.0 1.7e-24 86.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|407464184|ref|YP_006775066.1| - 3.8e-22 78.4 0.0 3e-17 62.3 0.0 2.3 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_7 PF13537.1 gi|407464184|ref|YP_006775066.1| - 2e-18 66.3 0.0 4.2e-18 65.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.1 gi|407464184|ref|YP_006775066.1| - 5.2e-10 38.4 0.1 8.1e-10 37.8 0.1 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II SIS_2 PF13580.1 gi|407464184|ref|YP_006775066.1| - 6.8e-08 32.3 4.7 0.00035 20.3 0.8 3.8 3 1 1 4 4 4 2 SIS domain Succ_DH_flav_C PF02910.15 gi|407464184|ref|YP_006775066.1| - 0.16 11.8 0.4 1.2 8.9 0.0 2.7 4 0 0 4 4 4 0 Fumarate reductase flavoprotein C-term DUF4533 PF15047.1 gi|407464184|ref|YP_006775066.1| - 0.67 9.3 9.4 0.38 10.1 0.2 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF4533) S4 PF01479.20 gi|407464185|ref|YP_006775067.1| - 1e-10 40.8 0.2 5.1e-10 38.6 0.0 2.2 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.14 gi|407464185|ref|YP_006775067.1| - 9.6e-06 25.9 0.9 1.7e-05 25.1 0.6 1.5 1 0 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S13 PF00416.17 gi|407464186|ref|YP_006775068.1| - 2.3e-27 95.5 0.1 2.8e-27 95.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 HHH_6 PF14579.1 gi|407464186|ref|YP_006775068.1| - 0.0085 16.1 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif H2TH PF06831.9 gi|407464186|ref|YP_006775068.1| - 0.13 11.9 0.0 0.33 10.7 0.0 1.6 2 0 0 2 2 2 0 Formamidopyrimidine-DNA glycosylase H2TH domain HTH_20 PF12840.2 gi|407464187|ref|YP_006775069.1| - 0.00018 21.2 0.0 0.00025 20.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|407464187|ref|YP_006775069.1| - 0.0072 15.9 0.1 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF4423 PF14394.1 gi|407464187|ref|YP_006775069.1| - 0.0095 15.4 0.1 0.012 15.1 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_45 PF14947.1 gi|407464187|ref|YP_006775069.1| - 0.033 13.9 0.0 0.05 13.4 0.0 1.4 1 1 0 1 1 1 0 Winged helix-turn-helix HTH_9 PF08221.6 gi|407464187|ref|YP_006775069.1| - 0.043 13.6 0.0 0.077 12.8 0.0 1.4 1 1 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_AsnC-type PF13404.1 gi|407464187|ref|YP_006775069.1| - 0.044 13.3 0.0 0.073 12.6 0.0 1.4 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Cullin_Nedd8 PF10557.4 gi|407464187|ref|YP_006775069.1| - 0.057 13.2 0.1 0.14 12.0 0.0 1.7 2 0 0 2 2 2 0 Cullin protein neddylation domain Dicty_CAD PF05720.7 gi|407464188|ref|YP_006775070.1| - 0.034 13.7 0.2 0.05 13.2 0.2 1.2 1 0 0 1 1 1 0 Cell-cell adhesion domain EMP24_GP25L PF01105.19 gi|407464188|ref|YP_006775070.1| - 0.039 13.6 0.1 0.039 13.6 0.1 1.5 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD Gram_pos_anchor PF00746.16 gi|407464188|ref|YP_006775070.1| - 0.53 10.1 4.6 4.6 7.1 0.4 2.5 2 0 0 2 2 2 0 Gram positive anchor Cu-oxidase_3 PF07732.10 gi|407464189|ref|YP_006775071.1| - 4.9e-23 81.1 5.3 1.3e-19 70.0 0.4 2.2 2 0 0 2 2 2 2 Multicopper oxidase Cu-oxidase_2 PF07731.9 gi|407464189|ref|YP_006775071.1| - 7e-17 61.2 8.3 1.1e-06 28.1 0.2 3.4 3 0 0 3 3 3 3 Multicopper oxidase Zip PF02535.17 gi|407464190|ref|YP_006775072.1| - 1.7e-07 30.6 15.5 1.7e-07 30.6 10.8 2.3 1 1 1 2 2 2 2 ZIP Zinc transporter Cation_efflux PF01545.16 gi|407464191|ref|YP_006775073.1| - 3.1e-79 265.9 24.1 4e-63 213.1 6.5 3.0 2 1 1 3 3 3 3 Cation efflux family DUF1206 PF06724.6 gi|407464191|ref|YP_006775073.1| - 0.026 14.2 0.4 0.026 14.2 0.3 2.8 3 0 0 3 3 3 0 Domain of Unknown Function (DUF1206) Lipid_DES PF08557.5 gi|407464191|ref|YP_006775073.1| - 0.1 11.8 0.5 0.19 10.9 0.4 1.4 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) BON PF04972.12 gi|407464191|ref|YP_006775073.1| - 0.2 11.4 1.9 0.47 10.2 0.3 2.3 2 0 0 2 2 2 0 BON domain DUF1469 PF07332.6 gi|407464191|ref|YP_006775073.1| - 6.2 6.5 14.9 0.95 9.1 0.7 3.8 3 1 0 3 3 3 0 Protein of unknown function (DUF1469) A2M_N PF01835.14 gi|407464192|ref|YP_006775074.1| - 0.0052 17.0 0.0 0.042 14.0 0.0 2.6 2 0 0 2 2 2 1 MG2 domain MelC1 PF06236.6 gi|407464192|ref|YP_006775074.1| - 0.16 11.9 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 Tyrosinase co-factor MelC1 Trypan_PARP PF05887.6 gi|407464193|ref|YP_006775075.1| - 0.00013 21.7 32.6 0.00028 20.7 22.6 1.6 1 1 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) Neisseria_TspB PF05616.8 gi|407464193|ref|YP_006775075.1| - 3.1 6.0 13.2 4.2 5.6 9.2 1.1 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Radical_SAM PF04055.16 gi|407464195|ref|YP_006775077.1| - 2.9e-12 47.0 0.0 5.5e-12 46.1 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.14 gi|407464195|ref|YP_006775077.1| - 0.048 13.5 0.0 0.1 12.5 0.0 1.6 1 0 0 1 1 1 0 B12 binding domain AIRC PF00731.15 gi|407464196|ref|YP_006775078.1| - 1.2e-19 70.0 3.2 1.7e-19 69.5 2.2 1.2 1 0 0 1 1 1 1 AIR carboxylase NAD_kinase PF01513.16 gi|407464196|ref|YP_006775078.1| - 0.0022 16.8 0.2 0.0037 16.0 0.1 1.5 1 1 0 1 1 1 1 ATP-NAD kinase Hpr_kinase_N PF02603.11 gi|407464196|ref|YP_006775078.1| - 0.064 12.9 1.2 3 7.5 0.2 2.3 2 0 0 2 2 2 0 HPr Serine kinase N terminus Ldh_1_N PF00056.18 gi|407464197|ref|YP_006775079.1| - 7.7e-37 126.2 0.4 1.5e-36 125.2 0.3 1.5 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.13 gi|407464197|ref|YP_006775079.1| - 7.6e-31 107.1 0.0 1.2e-30 106.5 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain DUF111 PF01969.12 gi|407464198|ref|YP_006775080.1| - 5.1e-112 374.4 0.4 6.3e-112 374.1 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 QueC PF06508.8 gi|407464199|ref|YP_006775081.1| - 1.4e-08 34.3 0.3 3e-07 29.9 0.1 2.4 1 1 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.12 gi|407464199|ref|YP_006775081.1| - 3.1e-07 29.5 0.0 5.6e-07 28.6 0.0 1.4 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|407464199|ref|YP_006775081.1| - 4.6e-07 28.7 0.2 2e-05 23.3 0.0 2.2 2 0 0 2 2 2 1 tRNA methyl transferase ATP_bind_3 PF01171.15 gi|407464199|ref|YP_006775081.1| - 9.9e-07 28.4 0.2 8.3e-06 25.4 0.2 2.3 1 1 0 1 1 1 1 PP-loop family Asn_synthase PF00733.16 gi|407464199|ref|YP_006775081.1| - 1.4e-06 28.0 0.0 2.8e-06 27.0 0.0 1.6 2 0 0 2 2 2 1 Asparagine synthase ThiI PF02568.9 gi|407464199|ref|YP_006775081.1| - 1.9e-05 24.2 0.1 6.1e-05 22.5 0.0 1.9 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Aminotran_5 PF00266.14 gi|407464200|ref|YP_006775082.1| - 1.7e-85 286.9 0.2 2e-85 286.7 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|407464200|ref|YP_006775082.1| - 8.6e-06 25.0 0.0 1.1e-05 24.7 0.0 1.3 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|407464200|ref|YP_006775082.1| - 0.00037 19.6 0.0 0.00064 18.8 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pyridoxal_deC PF00282.14 gi|407464200|ref|YP_006775082.1| - 0.064 11.6 0.0 0.11 10.9 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain CarboxypepD_reg PF13620.1 gi|407464201|ref|YP_006775083.1| - 0.027 14.5 0.7 0.071 13.1 0.4 1.9 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain Lip_prot_lig_C PF10437.4 gi|407464201|ref|YP_006775083.1| - 0.11 12.1 0.5 0.22 11.2 0.3 1.4 1 0 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus A2M_N PF01835.14 gi|407464202|ref|YP_006775084.1| - 0.033 14.4 0.1 0.065 13.5 0.1 1.5 1 0 0 1 1 1 0 MG2 domain DUF4369 PF14289.1 gi|407464202|ref|YP_006775084.1| - 0.038 14.0 3.2 0.49 10.4 2.0 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4369) GP40 PF11025.3 gi|407464202|ref|YP_006775084.1| - 0.054 13.0 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 Glycoprotein GP40 of Cryptosporidium Peptidase_C25_C PF03785.9 gi|407464202|ref|YP_006775084.1| - 0.44 10.3 7.8 2.3 8.0 0.4 3.5 2 1 1 3 3 3 0 Peptidase family C25, C terminal ig-like domain P_proprotein PF01483.15 gi|407464203|ref|YP_006775085.1| - 0.0063 16.2 0.0 0.15 11.8 0.0 2.4 2 0 0 2 2 2 1 Proprotein convertase P-domain BOF PF04076.8 gi|407464203|ref|YP_006775085.1| - 0.062 13.1 1.5 0.3 10.9 0.3 2.4 2 0 0 2 2 2 0 Bacterial OB fold (BOF) protein Flagellin_D3 PF08884.6 gi|407464203|ref|YP_006775085.1| - 0.092 12.9 9.1 0.75 10.0 1.9 3.8 2 1 1 3 3 3 0 Flagellin D3 domain FixH PF05751.6 gi|407464203|ref|YP_006775085.1| - 0.54 10.0 2.8 0.92 9.3 0.0 2.6 3 1 0 3 3 3 0 FixH Cadherin-like PF12733.2 gi|407464203|ref|YP_006775085.1| - 1.4 9.2 12.4 0.77 10.0 2.8 2.9 1 1 1 2 2 2 0 Cadherin-like beta sandwich domain A2M_N PF01835.14 gi|407464204|ref|YP_006775086.1| - 0.00087 19.5 0.2 0.0015 18.7 0.2 1.4 1 0 0 1 1 1 1 MG2 domain DUF4493 PF14900.1 gi|407464204|ref|YP_006775086.1| - 0.0027 17.3 5.8 0.0028 17.3 2.0 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4493) NEAT PF05031.7 gi|407464204|ref|YP_006775086.1| - 0.069 13.1 0.9 7.5 6.5 0.1 2.4 2 0 0 2 2 2 0 Iron Transport-associated domain Cbl_N3 PF02762.9 gi|407464204|ref|YP_006775086.1| - 0.08 12.5 0.0 0.33 10.6 0.0 1.9 1 1 1 2 2 2 0 CBL proto-oncogene N-terminus, SH2-like domain tRNA_anti-like PF12869.2 gi|407464204|ref|YP_006775086.1| - 0.082 12.3 0.2 0.2 11.1 0.2 1.6 1 0 0 1 1 1 0 tRNA_anti-like RNA_pol_Rpb5_C PF01191.14 gi|407464205|ref|YP_006775087.1| - 5e-29 99.7 0.1 5.8e-29 99.4 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb2_6 PF00562.23 gi|407464206|ref|YP_006775088.1| - 1.2e-120 402.8 0.0 1.8e-120 402.2 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.10 gi|407464206|ref|YP_006775088.1| - 1.1e-55 187.6 0.0 1.7e-55 187.1 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_7 PF04560.15 gi|407464206|ref|YP_006775088.1| - 1.1e-29 102.5 0.0 2.4e-29 101.3 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_3 PF04565.11 gi|407464206|ref|YP_006775088.1| - 7.7e-27 92.8 0.1 1.9e-26 91.5 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_2 PF04561.9 gi|407464206|ref|YP_006775088.1| - 8.4e-25 87.2 0.0 1.9e-24 86.1 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_4 PF04566.8 gi|407464206|ref|YP_006775088.1| - 3.3e-14 52.4 0.1 1e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.12 gi|407464206|ref|YP_006775088.1| - 2.2e-11 43.5 0.3 4.6e-11 42.5 0.2 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 Zn_Tnp_IS1595 PF12760.2 gi|407464206|ref|YP_006775088.1| - 0.056 13.2 0.2 0.12 12.1 0.1 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Ribosomal_L37e PF01907.14 gi|407464206|ref|YP_006775088.1| - 0.19 11.5 0.7 0.47 10.2 0.5 1.6 1 0 0 1 1 1 0 Ribosomal protein L37e RNA_pol_Rpb1_5 PF04998.12 gi|407464207|ref|YP_006775089.1| - 4.2e-84 282.0 2.3 9.1e-84 280.9 1.6 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.7 gi|407464207|ref|YP_006775089.1| - 1.3e-83 281.0 0.9 1.4e-81 274.4 0.1 3.1 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.15 gi|407464207|ref|YP_006775089.1| - 1.3e-69 233.4 0.0 3e-69 232.2 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.13 gi|407464207|ref|YP_006775089.1| - 7.1e-35 120.0 0.2 2.5e-34 118.2 0.0 2.1 3 0 0 3 3 3 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.12 gi|407464207|ref|YP_006775089.1| - 3.5e-24 84.6 0.3 9e-23 80.0 0.1 2.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 Spore_III_AF PF09581.5 gi|407464207|ref|YP_006775089.1| - 0.045 13.6 5.7 0.019 14.8 1.6 2.0 2 0 0 2 2 2 0 Stage III sporulation protein AF (Spore_III_AF) UPF0547 PF10571.4 gi|407464207|ref|YP_006775089.1| - 0.11 12.1 0.1 0.25 11.0 0.1 1.6 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 LSM PF01423.17 gi|407464208|ref|YP_006775090.1| - 9.1e-18 63.5 0.6 1.1e-17 63.3 0.4 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.1 gi|407464208|ref|YP_006775090.1| - 0.002 17.9 0.0 0.0021 17.9 0.0 1.1 1 0 0 1 1 1 1 Ataxin 2 SM domain DUF4497 PF14924.1 gi|407464208|ref|YP_006775090.1| - 0.065 13.5 0.0 0.073 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4497) TPR_1 PF00515.23 gi|407464210|ref|YP_006775092.1| - 4.8e-16 57.6 1.8 1.1e-05 24.8 1.4 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407464210|ref|YP_006775092.1| - 4.7e-15 54.2 0.2 0.00015 21.4 0.3 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.1 gi|407464210|ref|YP_006775092.1| - 3.6e-14 52.1 0.7 2.5e-07 30.2 0.0 2.4 2 0 0 2 2 2 2 TPR repeat TPR_8 PF13181.1 gi|407464210|ref|YP_006775092.1| - 2.4e-08 33.1 0.6 0.00068 19.2 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407464210|ref|YP_006775092.1| - 2.7e-08 33.3 2.7 0.00013 21.8 0.2 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407464210|ref|YP_006775092.1| - 4.5e-08 32.9 0.0 6.9e-05 22.7 0.0 2.5 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407464210|ref|YP_006775092.1| - 6.5e-08 33.0 0.0 0.018 15.7 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407464210|ref|YP_006775092.1| - 7.4e-07 29.2 0.0 0.00076 19.9 0.1 3.2 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407464210|ref|YP_006775092.1| - 1.6e-06 28.3 0.2 1.1e-05 25.7 0.2 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|407464210|ref|YP_006775092.1| - 0.00015 21.2 0.0 0.59 10.0 0.0 2.9 3 0 0 3 3 2 2 Tetratricopeptide repeat TPR_10 PF13374.1 gi|407464210|ref|YP_006775092.1| - 0.019 14.8 0.2 0.15 12.0 0.5 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.1 gi|407464210|ref|YP_006775092.1| - 0.063 13.7 0.0 0.43 11.1 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Apc3 PF12895.2 gi|407464210|ref|YP_006775092.1| - 0.092 12.8 0.4 0.66 10.1 0.1 2.1 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 Ribosomal_L7Ae PF01248.21 gi|407464211|ref|YP_006775093.1| - 9.3e-13 47.5 0.2 1.1e-12 47.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PI3K_p85B PF02192.11 gi|407464211|ref|YP_006775093.1| - 0.064 12.6 0.4 0.19 11.2 0.2 1.8 1 1 1 2 2 2 0 PI3-kinase family, p85-binding domain Methyltransf_5 PF01795.14 gi|407464211|ref|YP_006775093.1| - 0.088 12.0 1.6 0.48 9.6 0.1 2.0 1 1 0 2 2 2 0 MraW methylase family DUF2732 PF10809.3 gi|407464211|ref|YP_006775093.1| - 0.097 12.2 1.0 2.5 7.7 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2732) KH_2 PF07650.12 gi|407464212|ref|YP_006775094.1| - 7e-21 73.5 2.6 1.6e-12 46.7 0.1 2.1 2 0 0 2 2 2 2 KH domain KH_4 PF13083.1 gi|407464212|ref|YP_006775094.1| - 1.9e-11 43.4 1.0 1.5e-05 24.5 0.1 2.2 2 0 0 2 2 2 2 KH domain KH_5 PF13184.1 gi|407464212|ref|YP_006775094.1| - 1.6e-07 31.0 5.0 2.2e-07 30.5 0.3 2.1 2 0 0 2 2 2 1 NusA-like KH domain KH_1 PF00013.24 gi|407464212|ref|YP_006775094.1| - 0.00045 19.8 6.2 0.013 15.1 1.2 2.5 1 1 1 2 2 2 2 KH domain DUF3979 PF13141.1 gi|407464212|ref|YP_006775094.1| - 0.091 12.6 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) Ribosom_S12_S23 PF00164.20 gi|407464213|ref|YP_006775095.1| - 1.6e-38 130.8 0.5 2e-38 130.5 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.16 gi|407464214|ref|YP_006775096.1| - 2.4e-36 124.5 0.5 3.6e-36 123.9 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e CxxCxxCC PF03692.10 gi|407464216|ref|YP_006775098.1| - 3.9e-08 33.6 0.4 1.3e-07 31.9 0.3 1.8 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain Peptidase_M10 PF00413.19 gi|407464217|ref|YP_006775099.1| - 2.2e-12 46.9 0.0 3.8e-12 46.2 0.0 1.4 1 0 0 1 1 1 1 Matrixin Big_1 PF02369.11 gi|407464217|ref|YP_006775099.1| - 8.6e-08 32.0 4.4 5.2e-07 29.4 0.4 2.6 2 0 0 2 2 2 1 Bacterial Ig-like domain (group 1) CarboxypepD_reg PF13620.1 gi|407464217|ref|YP_006775099.1| - 7e-05 22.8 7.9 0.00098 19.1 0.8 2.8 2 1 0 2 2 2 2 Carboxypeptidase regulatory-like domain Big_3_4 PF13754.1 gi|407464217|ref|YP_006775099.1| - 0.0028 17.9 5.8 0.0028 17.9 4.0 3.9 3 0 0 3 3 3 1 Bacterial Ig-like domain (group 3) Reprolysin_4 PF13583.1 gi|407464217|ref|YP_006775099.1| - 0.0038 16.7 0.1 0.007 15.9 0.1 1.5 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.4 gi|407464217|ref|YP_006775099.1| - 0.021 13.7 0.1 0.033 13.0 0.0 1.2 1 0 0 1 1 1 0 Peptidase M66 Reprolysin_2 PF13574.1 gi|407464217|ref|YP_006775099.1| - 0.15 12.1 2.0 0.25 11.3 0.3 1.9 1 1 1 2 2 2 0 Metallo-peptidase family M12B Reprolysin-like Trp_halogenase PF04820.9 gi|407464218|ref|YP_006775100.1| - 2.5e-05 23.1 0.0 8.3e-05 21.3 0.0 1.7 1 1 0 1 1 1 1 Tryptophan halogenase NAD_binding_2 PF03446.10 gi|407464218|ref|YP_006775100.1| - 0.00099 18.9 0.1 0.0021 17.9 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.11 gi|407464218|ref|YP_006775100.1| - 0.003 16.9 0.0 0.0058 16.0 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.9 gi|407464218|ref|YP_006775100.1| - 0.051 13.4 0.0 0.08 12.8 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.9 gi|407464218|ref|YP_006775100.1| - 0.11 11.9 0.0 0.56 9.5 0.0 2.0 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Nitroreductase PF00881.19 gi|407464219|ref|YP_006775101.1| - 1.5e-27 96.4 0.0 2e-27 96.0 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family Cyclase PF04199.8 gi|407464219|ref|YP_006775101.1| - 0.023 14.3 0.0 0.034 13.8 0.0 1.3 1 0 0 1 1 1 0 Putative cyclase Cyclase_polyket PF04673.7 gi|407464220|ref|YP_006775102.1| - 0.079 12.9 0.0 0.099 12.6 0.0 1.1 1 0 0 1 1 1 0 Polyketide synthesis cyclase OAD_gamma PF04277.8 gi|407464221|ref|YP_006775103.1| - 1.5 9.2 4.8 1.5 9.2 3.3 1.1 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain TBCA PF02970.11 gi|407464222|ref|YP_006775104.1| - 0.15 12.1 3.3 0.19 11.8 2.3 1.1 1 0 0 1 1 1 0 Tubulin binding cofactor A DUF1741 PF08427.5 gi|407464223|ref|YP_006775105.1| - 0.05 13.0 0.7 0.055 12.9 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1741) L_biotic_typeA PF04604.8 gi|407464223|ref|YP_006775105.1| - 0.1 12.2 0.7 0.19 11.3 0.5 1.6 1 1 0 1 1 1 0 Type-A lantibiotic RPW8 PF05659.6 gi|407464223|ref|YP_006775105.1| - 0.12 11.9 1.3 0.12 11.8 0.9 1.1 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Transcrip_act PF04949.8 gi|407464223|ref|YP_006775105.1| - 0.2 11.2 2.8 0.3 10.6 2.0 1.3 1 1 0 1 1 1 0 Transcriptional activator Cep57_CLD_2 PF14197.1 gi|407464223|ref|YP_006775105.1| - 0.35 10.8 2.8 0.53 10.2 1.9 1.5 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF349 PF03993.7 gi|407464223|ref|YP_006775105.1| - 0.39 10.9 1.9 0.99 9.6 1.3 1.6 1 1 0 1 1 1 0 Domain of Unknown Function (DUF349) AIM24 PF01987.12 gi|407464224|ref|YP_006775106.1| - 3.4e-51 173.7 3.9 3.8e-51 173.5 2.7 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Ribosomal_S27e PF01667.12 gi|407464225|ref|YP_006775107.1| - 0.032 13.7 4.7 0.075 12.5 3.2 1.6 1 1 0 1 1 1 0 Ribosomal protein S27 ATE_N PF04376.8 gi|407464225|ref|YP_006775107.1| - 0.12 12.1 1.0 0.13 12.1 0.1 1.5 1 1 0 1 1 1 0 Arginine-tRNA-protein transferase, N terminus zinc_ribbon_4 PF13717.1 gi|407464225|ref|YP_006775107.1| - 0.57 9.9 9.1 1.1 8.9 0.9 2.4 1 1 1 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407464225|ref|YP_006775107.1| - 0.75 9.4 9.6 0.86 9.2 0.8 2.4 1 1 1 2 2 2 0 zinc-ribbon domain IBR PF01485.16 gi|407464225|ref|YP_006775107.1| - 0.84 9.5 5.1 1.5 8.7 3.5 1.4 1 1 0 1 1 1 0 IBR domain Zn-ribbon_8 PF09723.5 gi|407464225|ref|YP_006775107.1| - 1 9.3 3.3 5.3 7.0 2.3 2.0 1 1 1 2 2 2 0 Zinc ribbon domain Ribosomal_L44 PF00935.14 gi|407464225|ref|YP_006775107.1| - 1.5 8.9 3.9 2.7 8.0 0.1 2.0 1 1 1 2 2 2 0 Ribosomal protein L44 ATP_bind_4 PF01902.12 gi|407464226|ref|YP_006775108.1| - 0.11 11.8 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 ATP-binding region zinc_ribbon_2 PF13240.1 gi|407464227|ref|YP_006775109.1| - 7e-06 25.3 3.7 1.3e-05 24.5 2.6 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|407464227|ref|YP_006775109.1| - 4.5e-05 22.5 1.2 7.1e-05 21.8 0.8 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|407464227|ref|YP_006775109.1| - 0.00015 21.4 1.6 0.00028 20.6 1.1 1.4 1 0 0 1 1 1 1 Double zinc ribbon NOB1_Zn_bind PF08772.6 gi|407464227|ref|YP_006775109.1| - 0.0079 15.9 2.8 0.013 15.3 1.9 1.3 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like DUF2207 PF09972.4 gi|407464227|ref|YP_006775109.1| - 0.013 14.1 0.1 0.014 14.0 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Prok-RING_1 PF14446.1 gi|407464227|ref|YP_006775109.1| - 0.015 15.0 2.4 0.023 14.4 1.7 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-NADH-PPase PF09297.6 gi|407464227|ref|YP_006775109.1| - 0.032 13.7 0.1 0.032 13.7 0.1 2.0 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain HemY_N PF07219.8 gi|407464227|ref|YP_006775109.1| - 0.041 13.4 0.1 0.062 12.8 0.1 1.2 1 0 0 1 1 1 0 HemY protein N-terminus CcmD PF04995.9 gi|407464227|ref|YP_006775109.1| - 0.12 12.1 0.5 0.33 10.7 0.0 1.9 1 1 1 2 2 2 0 Heme exporter protein D (CcmD) Nudix_N_2 PF14803.1 gi|407464227|ref|YP_006775109.1| - 0.12 12.0 1.3 0.77 9.4 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal DUF2072 PF09845.4 gi|407464227|ref|YP_006775109.1| - 0.19 11.6 0.7 0.24 11.3 0.5 1.2 1 0 0 1 1 1 0 Zn-ribbon containing protein (DUF2072) HypA PF01155.14 gi|407464227|ref|YP_006775109.1| - 0.23 11.1 0.9 0.34 10.6 0.6 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family UPF0547 PF10571.4 gi|407464227|ref|YP_006775109.1| - 0.29 10.8 0.0 0.29 10.8 0.0 2.2 3 0 0 3 3 2 0 Uncharacterised protein family UPF0547 zf-LITAF-like PF10601.4 gi|407464227|ref|YP_006775109.1| - 0.59 10.0 7.7 1.2 9.0 0.4 3.1 2 2 0 2 2 2 0 LITAF-like zinc ribbon domain TM2 PF05154.11 gi|407464227|ref|YP_006775109.1| - 0.71 10.1 24.0 2.3 8.4 16.6 1.8 1 1 0 1 1 1 0 TM2 domain TF_Zn_Ribbon PF08271.7 gi|407464227|ref|YP_006775109.1| - 0.74 9.1 3.6 3.2 7.1 0.1 2.0 1 1 1 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.5 gi|407464227|ref|YP_006775109.1| - 1.4 8.9 6.2 1.3 9.0 2.9 1.9 2 1 0 2 2 1 0 Zinc ribbon domain A2L_zn_ribbon PF08792.5 gi|407464227|ref|YP_006775109.1| - 1.4 8.4 4.1 5.6 6.5 2.8 1.9 1 1 0 1 1 1 0 A2L zinc ribbon domain DUF2976 PF11190.3 gi|407464227|ref|YP_006775109.1| - 1.6 8.2 7.6 40 3.8 0.0 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) YhfH PF14149.1 gi|407464227|ref|YP_006775109.1| - 3.9 7.3 6.6 4.6 7.1 0.2 2.5 2 1 1 3 3 2 0 YhfH-like protein DUF1610 PF07754.6 gi|407464227|ref|YP_006775109.1| - 9.4 6.4 8.0 17 5.6 0.8 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) SNase PF00565.12 gi|407464228|ref|YP_006775110.1| - 4.3e-08 33.3 0.0 7.2e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Staphylococcal nuclease homologue Excalibur PF05901.6 gi|407464228|ref|YP_006775110.1| - 0.00086 19.5 1.6 0.0028 17.9 0.8 2.1 2 0 0 2 2 2 1 Excalibur calcium-binding domain HTH_23 PF13384.1 gi|407464229|ref|YP_006775111.1| - 1.9e-06 27.3 0.3 2.5e-05 23.7 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4_2 PF08281.7 gi|407464229|ref|YP_006775111.1| - 4.9e-06 25.8 0.0 5.4e-05 22.5 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_38 PF13936.1 gi|407464229|ref|YP_006775111.1| - 9.3e-06 25.1 0.0 0.00099 18.6 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|407464229|ref|YP_006775111.1| - 0.0012 18.4 0.0 0.0025 17.4 0.0 1.5 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.11 gi|407464229|ref|YP_006775111.1| - 0.0026 17.0 0.0 0.0057 15.9 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Tnp_1 PF01527.15 gi|407464229|ref|YP_006775111.1| - 0.0048 16.8 0.2 0.0073 16.2 0.1 1.3 1 0 0 1 1 1 1 Transposase Terminase_5 PF06056.7 gi|407464229|ref|YP_006775111.1| - 0.0085 15.6 0.0 0.017 14.6 0.0 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) DUF2774 PF11242.3 gi|407464229|ref|YP_006775111.1| - 0.011 15.6 0.0 0.023 14.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) UPF0122 PF04297.9 gi|407464229|ref|YP_006775111.1| - 0.017 15.1 1.5 0.035 14.1 0.5 2.0 1 1 1 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_7 PF02796.10 gi|407464229|ref|YP_006775111.1| - 0.02 14.7 0.0 0.038 13.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase SpoIIID PF12116.3 gi|407464229|ref|YP_006775111.1| - 0.02 14.7 0.8 0.046 13.6 0.0 1.8 2 0 0 2 2 2 0 Stage III sporulation protein D DUF1436 PF07262.6 gi|407464229|ref|YP_006775111.1| - 0.025 14.0 1.5 0.031 13.7 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1436) Sigma70_ECF PF07638.6 gi|407464229|ref|YP_006775111.1| - 0.026 14.2 0.0 0.045 13.4 0.0 1.4 1 0 0 1 1 1 0 ECF sigma factor HTH_30 PF13556.1 gi|407464229|ref|YP_006775111.1| - 0.045 13.3 0.0 0.12 12.0 0.0 1.7 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain HTH_29 PF13551.1 gi|407464229|ref|YP_006775111.1| - 0.084 13.0 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_3 PF01381.17 gi|407464229|ref|YP_006775111.1| - 0.09 12.6 0.0 0.35 10.7 0.0 2.0 3 0 0 3 3 3 0 Helix-turn-helix Laminin_G_3 PF13385.1 gi|407464231|ref|YP_006775113.1| - 0.00018 21.8 3.1 0.00018 21.8 2.2 4.0 1 1 1 2 2 2 1 Concanavalin A-like lectin/glucanases superfamily YadA_stalk PF05662.9 gi|407464231|ref|YP_006775113.1| - 0.024 14.3 1.7 0.1 12.3 0.2 3.0 2 0 0 2 2 2 0 Coiled stalk of trimeric autotransporter adhesin tRNA-synt_1 PF00133.17 gi|407464232|ref|YP_006775114.1| - 3.3e-61 207.0 5.8 4.8e-42 143.7 0.2 2.8 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 gi|407464232|ref|YP_006775114.1| - 5.4e-25 87.8 0.9 1.4e-12 46.9 0.1 3.4 2 1 1 3 3 3 2 tRNA synthetases class I (M) Anticodon_1 PF08264.8 gi|407464232|ref|YP_006775114.1| - 6.2e-22 78.0 1.1 1.2e-21 77.0 0.3 1.9 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.14 gi|407464232|ref|YP_006775114.1| - 1.2e-10 40.9 5.9 1.1e-06 27.9 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.1 gi|407464232|ref|YP_006775114.1| - 6.4e-08 32.1 0.2 2.4e-07 30.2 0.0 2.0 2 0 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 Fungal_trans_2 PF11951.3 gi|407464232|ref|YP_006775114.1| - 0.051 12.1 0.2 0.084 11.4 0.1 1.2 1 0 0 1 1 1 0 Fungal specific transcription factor domain tRNA-synt_2c PF01411.14 gi|407464233|ref|YP_006775115.1| - 1.1e-81 274.8 2.0 2.7e-81 273.5 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|407464233|ref|YP_006775115.1| - 3e-15 55.8 0.9 3e-15 55.8 0.6 2.2 2 0 0 2 2 2 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.14 gi|407464233|ref|YP_006775115.1| - 9e-08 31.7 3.1 2.6e-07 30.2 2.1 1.8 1 0 0 1 1 1 1 DHHA1 domain Slu7 PF11708.3 gi|407464233|ref|YP_006775115.1| - 0.0047 16.7 1.2 0.0047 16.7 0.8 1.9 2 0 0 2 2 2 1 Pre-mRNA splicing Prp18-interacting factor YolD PF08863.5 gi|407464233|ref|YP_006775115.1| - 0.016 15.0 0.2 0.016 15.0 0.1 2.5 3 0 0 3 3 3 0 YolD-like protein DUF2072 PF09845.4 gi|407464233|ref|YP_006775115.1| - 3.2 7.6 10.4 1.3 8.9 0.7 3.3 4 0 0 4 4 4 0 Zn-ribbon containing protein (DUF2072) DUF389 PF04087.9 gi|407464234|ref|YP_006775116.1| - 3.9e-31 107.8 15.4 3.9e-31 107.8 10.7 2.2 3 0 0 3 3 3 1 Domain of unknown function (DUF389) COX14 PF14880.1 gi|407464234|ref|YP_006775116.1| - 0.027 14.0 1.3 2.5 7.8 0.1 2.7 2 0 0 2 2 2 0 Cytochrome oxidase c assembly RE_TdeIII PF09520.5 gi|407464234|ref|YP_006775116.1| - 0.064 12.5 0.2 0.096 11.9 0.1 1.2 1 0 0 1 1 1 0 Type II restriction endonuclease, TdeIII Ribosomal_60s PF00428.14 gi|407464236|ref|YP_006775118.1| - 2.2e-15 56.8 19.9 2.5e-15 56.6 13.8 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein PepSY_2 PF13670.1 gi|407464236|ref|YP_006775118.1| - 0.26 11.2 8.2 3.2 7.7 4.1 2.2 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain DUF3138 PF11336.3 gi|407464236|ref|YP_006775118.1| - 0.28 9.3 5.8 0.29 9.2 4.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) UPF0126 PF03458.8 gi|407464237|ref|YP_006775119.1| - 9.9e-41 137.2 28.9 5.3e-21 74.0 5.0 2.7 2 1 1 3 3 3 2 UPF0126 domain PEN-2 PF10251.4 gi|407464237|ref|YP_006775119.1| - 0.3 11.3 4.1 0.66 10.2 0.5 2.5 1 1 1 2 2 2 0 Presenilin enhancer-2 subunit of gamma secretase 2TM PF13239.1 gi|407464237|ref|YP_006775119.1| - 3.6 7.7 8.5 4.4 7.4 0.4 2.4 2 0 0 2 2 2 0 2TM domain DnaI_N PF07319.6 gi|407464238|ref|YP_006775120.1| - 0.041 14.1 0.2 0.049 13.8 0.2 1.0 1 0 0 1 1 1 0 Primosomal protein DnaI N-terminus YqzH PF14164.1 gi|407464238|ref|YP_006775120.1| - 0.11 12.3 0.5 0.32 10.9 0.0 1.8 2 0 0 2 2 2 0 YqzH-like protein Ribosomal_L10 PF00466.15 gi|407464240|ref|YP_006775122.1| - 1.3e-17 63.5 0.5 3.2e-17 62.3 0.4 1.7 1 0 0 1 1 1 1 Ribosomal protein L10 DUF1993 PF09351.5 gi|407464240|ref|YP_006775122.1| - 0.048 13.5 1.5 1.3 8.9 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF1993) Ribosomal_L1 PF00687.16 gi|407464241|ref|YP_006775123.1| - 1.6e-47 161.6 4.2 1.9e-47 161.4 2.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Pantoate_ligase PF02569.10 gi|407464241|ref|YP_006775123.1| - 0.0032 16.2 0.1 0.0058 15.4 0.1 1.3 1 0 0 1 1 1 1 Pantoate-beta-alanine ligase DUF2533 PF10752.4 gi|407464241|ref|YP_006775123.1| - 0.059 13.6 0.6 0.16 12.3 0.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) AsnC_trans_reg PF01037.16 gi|407464242|ref|YP_006775124.1| - 2e-15 56.2 0.0 2.9e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 AsnC family HTH_24 PF13412.1 gi|407464242|ref|YP_006775124.1| - 3.8e-11 42.1 0.3 6.5e-11 41.4 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|407464242|ref|YP_006775124.1| - 2.1e-08 33.5 0.0 3.3e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain TrmB PF01978.14 gi|407464242|ref|YP_006775124.1| - 0.00023 20.7 0.1 0.00048 19.7 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB B-block_TFIIIC PF04182.7 gi|407464242|ref|YP_006775124.1| - 0.00024 20.8 0.2 0.00039 20.2 0.1 1.4 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC Ribosomal_S25 PF03297.10 gi|407464242|ref|YP_006775124.1| - 0.00092 19.2 1.3 0.0047 16.9 0.1 2.0 2 0 0 2 2 2 1 S25 ribosomal protein MarR PF01047.17 gi|407464242|ref|YP_006775124.1| - 0.0011 18.6 0.2 0.0023 17.6 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 gi|407464242|ref|YP_006775124.1| - 0.0013 18.3 0.8 0.0035 16.9 0.1 2.0 2 1 0 2 2 2 1 HTH domain Mga PF05043.8 gi|407464242|ref|YP_006775124.1| - 0.0042 17.3 0.3 0.0097 16.1 0.2 1.5 1 0 0 1 1 1 1 Mga helix-turn-helix domain HTH_psq PF05225.11 gi|407464242|ref|YP_006775124.1| - 0.008 15.7 0.1 0.016 14.7 0.0 1.4 1 0 0 1 1 1 1 helix-turn-helix, Psq domain DDRGK PF09756.4 gi|407464242|ref|YP_006775124.1| - 0.013 14.8 0.9 3.3 7.0 0.0 2.1 2 0 0 2 2 2 0 DDRGK domain MarR_2 PF12802.2 gi|407464242|ref|YP_006775124.1| - 0.015 14.9 0.0 0.025 14.2 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_Mga PF08280.6 gi|407464242|ref|YP_006775124.1| - 0.051 13.3 0.6 0.097 12.4 0.4 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Rrf2 PF02082.15 gi|407464242|ref|YP_006775124.1| - 0.055 13.6 0.2 0.24 11.5 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator MotA_activ PF09114.5 gi|407464242|ref|YP_006775124.1| - 0.082 12.6 0.3 0.25 11.1 0.0 1.8 2 0 0 2 2 2 0 Transcription factor MotA, activation domain Ribosomal_L11_N PF03946.9 gi|407464243|ref|YP_006775125.1| - 6.3e-24 83.1 0.5 1.3e-23 82.1 0.4 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.14 gi|407464243|ref|YP_006775125.1| - 3.5e-19 68.6 1.3 5.5e-19 68.0 0.9 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Spt5-NGN PF03439.8 gi|407464244|ref|YP_006775126.1| - 5.1e-20 70.9 0.0 8.1e-20 70.3 0.0 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.24 gi|407464244|ref|YP_006775126.1| - 3.9e-07 29.5 0.4 8.6e-07 28.4 0.3 1.6 1 0 0 1 1 1 1 KOW motif NusG PF02357.14 gi|407464244|ref|YP_006775126.1| - 0.0038 17.4 0.0 0.012 15.7 0.0 1.9 1 1 0 1 1 1 1 Transcription termination factor nusG SecE PF00584.15 gi|407464245|ref|YP_006775127.1| - 0.002 17.6 0.0 0.0022 17.5 0.0 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Frag1 PF10277.4 gi|407464245|ref|YP_006775127.1| - 0.0062 16.0 0.0 0.0066 15.9 0.0 1.0 1 0 0 1 1 1 1 Frag1/DRAM/Sfk1 family tRNA_deacylase PF04414.7 gi|407464246|ref|YP_006775128.1| - 7.1e-62 208.3 0.0 8.2e-62 208.1 0.0 1.0 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase DNA_binding_1 PF01035.15 gi|407464247|ref|YP_006775129.1| - 3e-29 100.6 0.0 3.4e-29 100.3 0.0 1.1 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Ribosomal_L19e PF01280.15 gi|407464248|ref|YP_006775130.1| - 3e-42 143.8 10.5 3.5e-42 143.6 7.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Fe_hyd_SSU PF02256.12 gi|407464248|ref|YP_006775130.1| - 0.0048 16.8 0.0 0.011 15.6 0.0 1.6 1 0 0 1 1 1 1 Iron hydrogenase small subunit Ribosomal_L32e PF01655.13 gi|407464249|ref|YP_006775131.1| - 1.1e-36 125.2 0.3 1.3e-36 125.0 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 PEPCK_ATP PF01293.15 gi|407464250|ref|YP_006775132.1| - 5.1e-214 711.0 0.0 5.8e-214 710.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_29 PF13555.1 gi|407464250|ref|YP_006775132.1| - 0.16 11.5 0.1 0.4 10.2 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain Peptidase_S8 PF00082.17 gi|407464251|ref|YP_006775133.1| - 2.9e-62 210.3 0.2 4.2e-62 209.8 0.1 1.2 1 0 0 1 1 1 1 Subtilase family PA PF02225.17 gi|407464251|ref|YP_006775133.1| - 1.4e-10 40.7 0.0 7.5e-10 38.4 0.0 2.2 2 1 0 2 2 2 1 PA domain Sod_Fe_C PF02777.13 gi|407464252|ref|YP_006775134.1| - 4.2e-43 145.4 0.1 6.8e-43 144.8 0.1 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.17 gi|407464252|ref|YP_006775134.1| - 5.3e-29 100.2 0.4 1e-28 99.4 0.3 1.5 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Prefoldin PF02996.12 gi|407464253|ref|YP_006775135.1| - 2.7e-18 65.7 5.2 2.7e-17 62.5 3.6 2.1 1 1 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.15 gi|407464253|ref|YP_006775135.1| - 0.011 15.5 0.4 0.011 15.5 0.3 2.3 2 1 0 2 2 2 0 Prefoldin subunit YlqD PF11068.3 gi|407464253|ref|YP_006775135.1| - 0.011 15.7 2.9 0.24 11.4 0.4 2.3 2 0 0 2 2 2 0 YlqD protein CENP-F_leu_zip PF10473.4 gi|407464253|ref|YP_006775135.1| - 0.015 15.1 6.0 0.1 12.4 0.2 2.1 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlgN PF05130.7 gi|407464253|ref|YP_006775135.1| - 0.027 14.7 3.1 0.48 10.6 0.5 2.1 2 0 0 2 2 2 0 FlgN protein TMF_TATA_bd PF12325.3 gi|407464253|ref|YP_006775135.1| - 0.041 13.5 4.2 0.64 9.7 0.6 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF1840 PF08895.6 gi|407464253|ref|YP_006775135.1| - 0.054 13.5 3.7 0.44 10.5 0.4 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF1840) DUF3638 PF12340.3 gi|407464253|ref|YP_006775135.1| - 0.11 11.4 1.4 0.13 11.2 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3638) FliD_C PF07195.7 gi|407464253|ref|YP_006775135.1| - 0.31 10.3 6.3 0.43 9.8 4.1 1.6 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus PilO PF04350.8 gi|407464253|ref|YP_006775135.1| - 0.35 10.7 7.8 0.06 13.2 1.7 2.0 2 0 0 2 2 2 0 Pilus assembly protein, PilO DUF724 PF05266.9 gi|407464253|ref|YP_006775135.1| - 0.46 10.0 6.0 0.11 12.1 0.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DUF4200 PF13863.1 gi|407464253|ref|YP_006775135.1| - 0.62 10.0 5.8 0.33 10.9 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) Snapin_Pallidin PF14712.1 gi|407464253|ref|YP_006775135.1| - 0.81 10.0 4.7 1.6 9.0 0.4 2.2 2 0 0 2 2 2 0 Snapin/Pallidin DUF2397 PF09660.5 gi|407464253|ref|YP_006775135.1| - 0.93 8.0 4.0 0.78 8.2 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2397) Mnd1 PF03962.10 gi|407464253|ref|YP_006775135.1| - 1 8.9 4.2 1.3 8.6 0.4 2.0 2 0 0 2 2 2 0 Mnd1 family EAP30 PF04157.11 gi|407464253|ref|YP_006775135.1| - 2.1 7.4 6.5 5.2 6.1 0.7 2.2 2 0 0 2 2 2 0 EAP30/Vps36 family Ax_dynein_light PF10211.4 gi|407464253|ref|YP_006775135.1| - 3.6 7.3 6.1 3.6 7.3 0.5 2.0 2 0 0 2 2 2 0 Axonemal dynein light chain ATP-synt_B PF00430.13 gi|407464253|ref|YP_006775135.1| - 6.9 6.4 10.6 0.74 9.6 3.2 2.0 2 1 0 2 2 2 0 ATP synthase B/B' CF(0) SRP54 PF00448.17 gi|407464254|ref|YP_006775136.1| - 1.3e-71 240.1 0.4 1.9e-71 239.6 0.3 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.14 gi|407464254|ref|YP_006775136.1| - 3.1e-11 43.2 8.0 7.8e-11 41.9 5.5 1.7 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.1 gi|407464254|ref|YP_006775136.1| - 7.1e-07 28.9 0.1 1.2e-06 28.2 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|407464254|ref|YP_006775136.1| - 2.3e-05 24.5 0.5 6.9e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain MobB PF03205.9 gi|407464254|ref|YP_006775136.1| - 0.0001 22.0 0.3 0.0011 18.6 0.0 2.2 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Zeta_toxin PF06414.7 gi|407464254|ref|YP_006775136.1| - 0.00016 20.8 0.2 0.00025 20.2 0.2 1.3 1 0 0 1 1 1 1 Zeta toxin AAA PF00004.24 gi|407464254|ref|YP_006775136.1| - 0.00052 20.2 0.1 0.0013 18.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) cobW PF02492.14 gi|407464254|ref|YP_006775136.1| - 0.00054 19.4 1.3 0.0015 18.0 0.9 1.7 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.18 gi|407464254|ref|YP_006775136.1| - 0.00095 18.6 0.3 0.0022 17.4 0.2 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.1 gi|407464254|ref|YP_006775136.1| - 0.0028 17.5 0.0 0.0047 16.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|407464254|ref|YP_006775136.1| - 0.0046 16.9 0.0 0.0096 15.9 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain PIF1 PF05970.9 gi|407464254|ref|YP_006775136.1| - 0.0055 15.7 0.1 0.0086 15.0 0.1 1.2 1 0 0 1 1 1 1 PIF1-like helicase Trypan_PARP PF05887.6 gi|407464254|ref|YP_006775136.1| - 0.0065 16.3 66.2 0.0065 16.3 45.9 3.2 1 1 1 3 3 2 2 Procyclic acidic repetitive protein (PARP) TPP_enzyme_M PF00205.17 gi|407464254|ref|YP_006775136.1| - 0.0066 16.2 0.5 0.085 12.6 0.1 2.8 4 0 0 4 4 4 1 Thiamine pyrophosphate enzyme, central domain ABC_tran PF00005.22 gi|407464254|ref|YP_006775136.1| - 0.0082 16.4 0.0 0.016 15.4 0.0 1.6 1 0 0 1 1 1 1 ABC transporter NTPase_1 PF03266.10 gi|407464254|ref|YP_006775136.1| - 0.0092 15.6 0.1 0.9 9.2 0.0 2.3 2 0 0 2 2 2 1 NTPase APS_kinase PF01583.15 gi|407464254|ref|YP_006775136.1| - 0.0093 15.6 0.1 0.052 13.2 0.0 2.0 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA_19 PF13245.1 gi|407464254|ref|YP_006775136.1| - 0.013 15.2 0.0 0.027 14.2 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain KTI12 PF08433.5 gi|407464254|ref|YP_006775136.1| - 0.014 14.6 0.6 0.04 13.1 0.0 1.9 2 1 0 2 2 2 0 Chromatin associated protein KTI12 SPOUT_MTase PF02590.12 gi|407464254|ref|YP_006775136.1| - 0.017 14.8 0.1 0.059 13.0 0.0 1.8 1 1 0 1 1 1 0 Predicted SPOUT methyltransferase Thymidylate_kin PF02223.12 gi|407464254|ref|YP_006775136.1| - 0.018 14.4 0.2 0.052 12.9 0.0 1.9 2 0 0 2 2 2 0 Thymidylate kinase TK PF00265.13 gi|407464254|ref|YP_006775136.1| - 0.025 14.1 0.2 0.041 13.4 0.1 1.3 1 0 0 1 1 1 0 Thymidine kinase AAA_14 PF13173.1 gi|407464254|ref|YP_006775136.1| - 0.028 14.3 0.0 0.083 12.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.4 gi|407464254|ref|YP_006775136.1| - 0.029 13.3 0.2 0.046 12.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DAP3 PF10236.4 gi|407464254|ref|YP_006775136.1| - 0.06 12.2 0.0 0.099 11.5 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 Arch_ATPase PF01637.13 gi|407464254|ref|YP_006775136.1| - 0.065 12.9 0.3 0.065 12.9 0.2 1.9 1 1 1 2 2 2 0 Archaeal ATPase AAA_28 PF13521.1 gi|407464254|ref|YP_006775136.1| - 0.076 12.9 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|407464254|ref|YP_006775136.1| - 0.092 11.6 0.0 0.15 10.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Ribosomal_L18p PF00861.17 gi|407464255|ref|YP_006775137.1| - 3.6e-20 72.3 1.1 4.7e-20 71.9 0.8 1.1 1 0 0 1 1 1 1 Ribosomal L18p/L5e family Ribosomal_S5 PF00333.15 gi|407464256|ref|YP_006775138.1| - 2e-18 65.9 0.6 3.2e-18 65.2 0.4 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.10 gi|407464256|ref|YP_006775138.1| - 2.2e-15 55.7 0.1 3.8e-15 54.9 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain DOMON PF03351.12 gi|407464256|ref|YP_006775138.1| - 0.076 12.9 0.1 1.4 8.8 0.1 2.4 3 0 0 3 3 3 0 DOMON domain Ribosomal_L30 PF00327.15 gi|407464257|ref|YP_006775139.1| - 3.6e-13 48.8 0.0 7.8e-13 47.7 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L18e PF00828.14 gi|407464258|ref|YP_006775140.1| - 1.8e-19 70.3 0.6 2.4e-19 69.9 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 SecY PF00344.15 gi|407464259|ref|YP_006775141.1| - 1.4e-83 280.7 23.1 1.6e-83 280.4 16.0 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.4 gi|407464259|ref|YP_006775141.1| - 9e-11 41.0 1.6 3.1e-10 39.3 1.1 2.0 1 0 0 1 1 1 1 Plug domain of Sec61p AAA_18 PF13238.1 gi|407464260|ref|YP_006775142.1| - 4.5e-14 52.8 0.2 6.4e-14 52.3 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|407464260|ref|YP_006775142.1| - 2.8e-08 34.5 0.0 4.2e-08 34.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|407464260|ref|YP_006775142.1| - 5.8e-07 29.1 0.1 8.4e-07 28.6 0.1 1.5 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_28 PF13521.1 gi|407464260|ref|YP_006775142.1| - 1.7e-06 28.0 0.1 5.3e-06 26.4 0.0 1.7 2 0 0 2 2 2 1 AAA domain KTI12 PF08433.5 gi|407464260|ref|YP_006775142.1| - 1.6e-05 24.2 0.2 2.6e-05 23.5 0.1 1.3 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_33 PF13671.1 gi|407464260|ref|YP_006775142.1| - 3.1e-05 23.8 0.0 5.5e-05 23.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.10 gi|407464260|ref|YP_006775142.1| - 3.7e-05 23.4 3.2 0.00035 20.3 0.2 2.2 1 1 0 2 2 2 1 NTPase Arch_ATPase PF01637.13 gi|407464260|ref|YP_006775142.1| - 4.6e-05 23.2 0.5 8.9e-05 22.2 0.1 1.6 2 0 0 2 2 2 1 Archaeal ATPase AAA_14 PF13173.1 gi|407464260|ref|YP_006775142.1| - 6.2e-05 22.9 0.1 0.0001 22.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.18 gi|407464260|ref|YP_006775142.1| - 8.2e-05 22.5 0.1 0.00014 21.8 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase Zeta_toxin PF06414.7 gi|407464260|ref|YP_006775142.1| - 8.9e-05 21.6 0.0 0.00015 20.9 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin cobW PF02492.14 gi|407464260|ref|YP_006775142.1| - 0.00021 20.7 0.4 0.00046 19.6 0.1 1.6 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.7 gi|407464260|ref|YP_006775142.1| - 0.00032 20.3 0.1 0.00037 20.1 0.0 1.3 1 1 0 1 1 1 1 NACHT domain AAA_30 PF13604.1 gi|407464260|ref|YP_006775142.1| - 0.00045 19.8 0.2 0.0011 18.5 0.0 1.7 2 1 0 2 2 1 1 AAA domain AAA_22 PF13401.1 gi|407464260|ref|YP_006775142.1| - 0.00069 19.7 0.1 0.0014 18.7 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|407464260|ref|YP_006775142.1| - 0.00081 19.4 0.1 0.0019 18.2 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain ATP_bind_1 PF03029.12 gi|407464260|ref|YP_006775142.1| - 0.00096 18.7 0.1 0.0021 17.6 0.0 1.6 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein Miro PF08477.8 gi|407464260|ref|YP_006775142.1| - 0.001 19.5 0.6 0.0021 18.5 0.2 1.7 2 0 0 2 2 1 1 Miro-like protein DUF2075 PF09848.4 gi|407464260|ref|YP_006775142.1| - 0.0011 18.0 0.3 0.0015 17.5 0.1 1.3 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) ArgK PF03308.11 gi|407464260|ref|YP_006775142.1| - 0.0013 17.6 0.1 0.0022 16.8 0.1 1.4 1 0 0 1 1 1 1 ArgK protein MobB PF03205.9 gi|407464260|ref|YP_006775142.1| - 0.0019 17.8 0.5 0.005 16.5 0.2 1.9 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.24 gi|407464260|ref|YP_006775142.1| - 0.0019 18.3 0.7 0.0033 17.6 0.2 1.7 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) 6PF2K PF01591.13 gi|407464260|ref|YP_006775142.1| - 0.0028 16.7 0.0 0.0059 15.7 0.0 1.6 2 0 0 2 2 2 1 6-phosphofructo-2-kinase AAA_19 PF13245.1 gi|407464260|ref|YP_006775142.1| - 0.004 16.8 0.0 0.0086 15.8 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain NB-ARC PF00931.17 gi|407464260|ref|YP_006775142.1| - 0.0042 15.9 0.0 0.0055 15.6 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain Viral_helicase1 PF01443.13 gi|407464260|ref|YP_006775142.1| - 0.0046 16.5 0.0 0.0082 15.6 0.0 1.6 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase DnaB_C PF03796.10 gi|407464260|ref|YP_006775142.1| - 0.0076 15.1 0.5 0.011 14.5 0.1 1.6 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain APS_kinase PF01583.15 gi|407464260|ref|YP_006775142.1| - 0.0077 15.8 0.2 0.37 10.4 0.0 2.2 1 1 0 2 2 2 1 Adenylylsulphate kinase ABC_tran PF00005.22 gi|407464260|ref|YP_006775142.1| - 0.0081 16.4 2.9 0.012 15.8 2.0 1.7 1 1 0 1 1 1 1 ABC transporter DUF258 PF03193.11 gi|407464260|ref|YP_006775142.1| - 0.0098 15.0 0.3 0.023 13.9 0.1 1.5 1 1 0 1 1 1 1 Protein of unknown function, DUF258 Thymidylate_kin PF02223.12 gi|407464260|ref|YP_006775142.1| - 0.01 15.2 0.8 0.04 13.2 0.6 2.2 1 1 0 1 1 1 0 Thymidylate kinase PduV-EutP PF10662.4 gi|407464260|ref|YP_006775142.1| - 0.022 14.2 0.1 0.053 13.0 0.1 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation RNA_helicase PF00910.17 gi|407464260|ref|YP_006775142.1| - 0.025 14.7 0.1 0.079 13.1 0.0 1.8 2 1 0 2 2 1 0 RNA helicase T2SE PF00437.15 gi|407464260|ref|YP_006775142.1| - 0.027 13.3 0.1 0.053 12.4 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein TrwB_AAD_bind PF10412.4 gi|407464260|ref|YP_006775142.1| - 0.034 12.7 0.1 0.053 12.1 0.1 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Arf PF00025.16 gi|407464260|ref|YP_006775142.1| - 0.035 13.3 0.8 0.075 12.2 0.1 1.9 2 1 0 2 2 2 0 ADP-ribosylation factor family AAA_5 PF07728.9 gi|407464260|ref|YP_006775142.1| - 0.036 13.7 0.1 0.095 12.4 0.0 1.7 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) AAA_15 PF13175.1 gi|407464260|ref|YP_006775142.1| - 0.036 13.0 0.4 0.086 11.8 0.3 1.6 1 1 0 1 1 1 0 AAA ATPase domain Ras PF00071.17 gi|407464260|ref|YP_006775142.1| - 0.044 13.1 0.1 0.12 11.7 0.1 1.8 1 0 0 1 1 1 0 Ras family AAA_3 PF07726.6 gi|407464260|ref|YP_006775142.1| - 0.059 12.9 0.1 0.14 11.7 0.0 1.7 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) Pox_A32 PF04665.7 gi|407464260|ref|YP_006775142.1| - 0.066 12.5 0.1 0.14 11.4 0.0 1.6 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_24 PF13479.1 gi|407464260|ref|YP_006775142.1| - 0.07 12.6 1.1 0.14 11.6 0.7 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|407464260|ref|YP_006775142.1| - 0.071 12.5 0.2 0.24 10.7 0.0 1.9 1 1 1 2 2 2 0 AAA domain AAA_10 PF12846.2 gi|407464260|ref|YP_006775142.1| - 0.077 12.4 0.0 0.1 12.0 0.0 1.4 1 1 0 1 1 1 0 AAA-like domain UPF0079 PF02367.12 gi|407464260|ref|YP_006775142.1| - 0.11 12.1 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 Elong_Iki1 PF10483.4 gi|407464260|ref|YP_006775142.1| - 0.11 11.7 0.6 0.13 11.5 0.4 1.2 1 1 0 1 1 1 0 Elongator subunit Iki1 DUF106 PF01956.11 gi|407464261|ref|YP_006775143.1| - 2e-14 53.5 11.8 9.3e-14 51.3 4.0 2.0 2 0 0 2 2 2 2 Integral membrane protein DUF106 ApoC-I PF04691.7 gi|407464261|ref|YP_006775143.1| - 0.17 11.5 2.6 0.29 10.8 1.8 1.3 1 0 0 1 1 1 0 Apolipoprotein C-I (ApoC-1) Cytidylate_kin2 PF13189.1 gi|407464262|ref|YP_006775144.1| - 6.3e-15 55.5 0.0 8.3e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.1 gi|407464262|ref|YP_006775144.1| - 1.2e-14 54.7 0.0 2.3e-14 53.8 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|407464262|ref|YP_006775144.1| - 8.5e-11 42.7 0.0 1.7e-10 41.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain SKI PF01202.17 gi|407464262|ref|YP_006775144.1| - 6.4e-08 32.6 0.1 1.1e-07 31.7 0.0 1.4 1 1 0 1 1 1 1 Shikimate kinase ADK PF00406.17 gi|407464262|ref|YP_006775144.1| - 8.1e-06 25.7 0.4 6.4e-05 22.8 0.0 2.2 2 1 0 2 2 2 1 Adenylate kinase AAA_28 PF13521.1 gi|407464262|ref|YP_006775144.1| - 1.8e-05 24.7 0.0 3.9e-05 23.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|407464262|ref|YP_006775144.1| - 2e-05 24.5 0.0 0.0003 20.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA PF00004.24 gi|407464262|ref|YP_006775144.1| - 0.00019 21.6 0.0 0.00031 20.9 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) KTI12 PF08433.5 gi|407464262|ref|YP_006775144.1| - 0.00043 19.5 0.4 0.0031 16.7 0.0 2.0 1 1 1 2 2 2 1 Chromatin associated protein KTI12 AAA_22 PF13401.1 gi|407464262|ref|YP_006775144.1| - 0.004 17.2 0.0 0.0097 16.0 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|407464262|ref|YP_006775144.1| - 0.004 17.0 0.1 0.0085 15.9 0.0 1.9 1 1 1 2 2 2 1 AAA domain RNA_helicase PF00910.17 gi|407464262|ref|YP_006775144.1| - 0.0064 16.6 0.0 0.011 15.8 0.0 1.5 1 0 0 1 1 1 1 RNA helicase NTPase_1 PF03266.10 gi|407464262|ref|YP_006775144.1| - 0.0071 16.0 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 NTPase MobB PF03205.9 gi|407464262|ref|YP_006775144.1| - 0.011 15.4 0.0 0.023 14.4 0.0 1.5 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Zeta_toxin PF06414.7 gi|407464262|ref|YP_006775144.1| - 0.012 14.7 0.0 0.023 13.8 0.0 1.7 1 1 0 1 1 1 0 Zeta toxin AAA_19 PF13245.1 gi|407464262|ref|YP_006775144.1| - 0.013 15.2 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain RuvB_N PF05496.7 gi|407464262|ref|YP_006775144.1| - 0.014 14.4 0.0 0.022 13.8 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|407464262|ref|YP_006775144.1| - 0.028 14.3 0.0 0.038 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain Guanylate_kin PF00625.16 gi|407464262|ref|YP_006775144.1| - 0.035 13.5 0.2 0.82 9.0 0.0 2.3 2 0 0 2 2 2 0 Guanylate kinase Rad17 PF03215.10 gi|407464262|ref|YP_006775144.1| - 0.038 12.6 0.0 0.056 12.1 0.0 1.2 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_25 PF13481.1 gi|407464262|ref|YP_006775144.1| - 0.13 11.6 0.0 0.31 10.4 0.0 1.6 2 1 0 2 2 2 0 AAA domain TruB_N PF01509.13 gi|407464263|ref|YP_006775145.1| - 6.4e-24 84.7 3.2 3e-14 53.4 0.0 3.6 2 1 1 3 3 3 2 TruB family pseudouridylate synthase (N terminal domain) PUA PF01472.15 gi|407464263|ref|YP_006775145.1| - 3.7e-19 68.2 0.2 9.5e-19 66.9 0.2 1.6 2 0 0 2 2 2 1 PUA domain DKCLD PF08068.7 gi|407464263|ref|YP_006775145.1| - 5.3e-12 45.4 0.0 1.1e-11 44.4 0.0 1.6 1 0 0 1 1 1 1 DKCLD (NUC011) domain FlgD_ig PF13860.1 gi|407464264|ref|YP_006775146.1| - 0.00017 21.2 0.1 0.00037 20.1 0.0 1.7 1 1 0 1 1 1 1 FlgD Ig-like domain ParBc PF02195.13 gi|407464265|ref|YP_006775147.1| - 1.3e-19 70.0 0.3 3.3e-19 68.7 0.2 1.7 1 0 0 1 1 1 1 ParB-like nuclease domain Membralin PF09746.4 gi|407464266|ref|YP_006775148.1| - 0.0076 15.3 1.6 0.012 14.6 1.1 1.3 1 0 0 1 1 1 1 Tumour-associated protein DUF4398 PF14346.1 gi|407464266|ref|YP_006775148.1| - 0.012 15.6 2.3 0.012 15.6 1.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4398) Ral PF11058.3 gi|407464266|ref|YP_006775148.1| - 0.18 11.2 1.5 6.1 6.3 0.2 2.4 2 0 0 2 2 2 0 Antirestriction protein Ral DUF2935 PF11155.3 gi|407464266|ref|YP_006775148.1| - 1.5 8.9 5.2 0.38 10.8 0.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) ATP-synt_B PF00430.13 gi|407464266|ref|YP_006775148.1| - 5.5 6.7 17.0 1.8 8.3 2.2 3.7 1 1 2 3 3 3 0 ATP synthase B/B' CF(0) MS_channel PF00924.13 gi|407464267|ref|YP_006775149.1| - 1.7e-09 37.3 5.3 1.7e-09 37.3 3.7 1.9 1 1 1 2 2 2 1 Mechanosensitive ion channel DUF3589 PF12141.3 gi|407464267|ref|YP_006775149.1| - 0.014 13.6 0.1 0.018 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3589) DUF3784 PF12650.2 gi|407464267|ref|YP_006775149.1| - 0.73 9.8 12.8 0.074 13.0 2.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) Acetyltransf_1 PF00583.19 gi|407464269|ref|YP_006775151.1| - 4.1e-10 39.5 0.0 5.9e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|407464269|ref|YP_006775151.1| - 1.3e-07 31.6 0.0 2e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|407464269|ref|YP_006775151.1| - 1.4e-05 25.3 0.0 2.2e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|407464269|ref|YP_006775151.1| - 3.4e-05 23.9 0.0 4.2e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|407464269|ref|YP_006775151.1| - 0.004 17.0 0.0 0.008 16.0 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|407464269|ref|YP_006775151.1| - 0.01 15.7 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Aminotran_3 PF00202.16 gi|407464270|ref|YP_006775152.1| - 8.5e-76 254.9 0.0 1.1e-75 254.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Ectoine_synth PF06339.7 gi|407464271|ref|YP_006775153.1| - 9.7e-58 193.6 0.1 1.1e-57 193.4 0.1 1.0 1 0 0 1 1 1 1 Ectoine synthase Cupin_2 PF07883.6 gi|407464271|ref|YP_006775153.1| - 6.2e-05 22.4 0.1 8.8e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Pirin_C PF05726.8 gi|407464271|ref|YP_006775153.1| - 0.003 17.5 0.0 0.0042 17.1 0.0 1.2 1 0 0 1 1 1 1 Pirin C-terminal cupin domain AraC_binding PF02311.14 gi|407464271|ref|YP_006775153.1| - 0.011 15.4 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_3 PF05899.7 gi|407464271|ref|YP_006775153.1| - 0.079 12.3 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF861) PhyH PF05721.8 gi|407464272|ref|YP_006775154.1| - 7.3e-31 107.8 0.0 8.8e-31 107.5 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) AsnC_trans_reg PF01037.16 gi|407464273|ref|YP_006775155.1| - 1.2e-06 28.1 0.0 1.4e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 AsnC family HTH_20 PF12840.2 gi|407464275|ref|YP_006775157.1| - 7.3e-07 28.8 0.0 1.8e-06 27.6 0.0 1.5 2 0 0 2 2 1 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|407464275|ref|YP_006775157.1| - 1.2e-05 24.9 0.0 3.3e-05 23.4 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|407464275|ref|YP_006775157.1| - 3.7e-05 23.0 0.1 0.00011 21.5 0.1 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_45 PF14947.1 gi|407464275|ref|YP_006775157.1| - 4.9e-05 23.0 1.8 6.7e-05 22.6 0.0 2.1 3 0 0 3 3 3 1 Winged helix-turn-helix HTH_5 PF01022.15 gi|407464275|ref|YP_006775157.1| - 7.8e-05 22.2 0.5 0.00018 21.0 0.2 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.7 gi|407464275|ref|YP_006775157.1| - 0.00032 20.2 0.1 0.00091 18.8 0.0 1.8 2 0 0 2 2 2 1 HTH domain HTH_27 PF13463.1 gi|407464275|ref|YP_006775157.1| - 0.0018 18.5 0.0 0.0036 17.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|407464275|ref|YP_006775157.1| - 0.0018 17.9 0.1 0.0071 16.0 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Val_tRNA-synt_C PF10458.4 gi|407464275|ref|YP_006775157.1| - 0.0032 17.5 0.0 0.007 16.4 0.0 1.5 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm MarR PF01047.17 gi|407464275|ref|YP_006775157.1| - 0.0093 15.6 0.1 0.022 14.4 0.1 1.6 1 0 0 1 1 1 1 MarR family DUF4423 PF14394.1 gi|407464275|ref|YP_006775157.1| - 0.012 15.1 0.0 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_39 PF14090.1 gi|407464275|ref|YP_006775157.1| - 0.016 14.6 0.1 6.8 6.2 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Fe_dep_repress PF01325.14 gi|407464275|ref|YP_006775157.1| - 0.018 14.9 0.0 0.06 13.3 0.0 1.9 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.5 gi|407464275|ref|YP_006775157.1| - 0.022 14.3 0.0 0.041 13.4 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_34 PF13601.1 gi|407464275|ref|YP_006775157.1| - 0.032 14.2 1.9 0.068 13.2 0.1 2.5 3 1 0 3 3 3 0 Winged helix DNA-binding domain zf-ribbon_3 PF13248.1 gi|407464276|ref|YP_006775158.1| - 0.003 16.7 1.4 1.6 8.0 0.2 2.2 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.2 gi|407464276|ref|YP_006775158.1| - 0.016 14.9 0.8 0.035 13.9 0.6 1.6 1 1 0 1 1 1 0 Double zinc ribbon zf-ISL3 PF14690.1 gi|407464276|ref|YP_006775158.1| - 0.027 14.4 0.7 0.92 9.5 0.1 2.6 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zinc_ribbon_2 PF13240.1 gi|407464276|ref|YP_006775158.1| - 0.028 13.8 1.1 1.8 8.1 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Gin PF10764.4 gi|407464276|ref|YP_006775158.1| - 0.03 14.0 1.5 0.089 12.5 1.0 1.8 1 1 0 1 1 1 0 Inhibitor of sigma-G Gin TF_Zn_Ribbon PF08271.7 gi|407464276|ref|YP_006775158.1| - 0.033 13.5 2.0 0.11 11.8 1.4 1.8 1 1 0 1 1 1 0 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.6 gi|407464276|ref|YP_006775158.1| - 0.042 13.5 0.4 0.06 13.0 0.3 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Ribosomal_S27e PF01667.12 gi|407464276|ref|YP_006775158.1| - 0.085 12.4 0.5 12 5.4 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein S27 Zn-ribbon_8 PF09723.5 gi|407464276|ref|YP_006775158.1| - 0.088 12.7 0.2 6.9 6.7 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain IBR PF01485.16 gi|407464276|ref|YP_006775158.1| - 0.088 12.6 1.7 4.9 7.1 0.1 2.1 1 1 1 2 2 2 0 IBR domain zf-RING_3 PF14369.1 gi|407464276|ref|YP_006775158.1| - 0.093 12.7 1.7 8.4 6.4 0.1 2.3 1 1 1 2 2 2 0 zinc-finger Prok-RING_1 PF14446.1 gi|407464276|ref|YP_006775158.1| - 0.19 11.4 2.0 2 8.2 1.4 2.1 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 Spt4 PF06093.8 gi|407464276|ref|YP_006775158.1| - 0.36 10.7 2.5 3.3 7.6 1.3 2.0 1 1 1 2 2 2 0 Spt4/RpoE2 zinc finger zf-HIT PF04438.11 gi|407464277|ref|YP_006775159.1| - 0.025 14.2 9.6 0.029 13.9 3.1 2.2 2 0 0 2 2 2 0 HIT zinc finger GF_recep_IV PF14843.1 gi|407464277|ref|YP_006775159.1| - 0.07 12.7 5.1 0.068 12.7 3.5 1.1 1 0 0 1 1 1 0 Growth factor receptor domain IV tRNA-synt_1g PF09334.6 gi|407464277|ref|YP_006775159.1| - 0.075 11.6 0.4 0.075 11.6 0.3 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (M) Elf1 PF05129.8 gi|407464277|ref|YP_006775159.1| - 0.084 12.5 5.2 0.1 12.3 3.6 1.1 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like FYVE_2 PF02318.11 gi|407464277|ref|YP_006775159.1| - 0.11 12.4 5.7 0.11 12.3 3.9 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger zf-P11 PF03854.9 gi|407464277|ref|YP_006775159.1| - 0.83 9.1 8.6 1.7 8.1 0.5 2.4 1 1 1 2 2 2 0 P-11 zinc finger PolC_DP2 PF03833.8 gi|407464277|ref|YP_006775159.1| - 1.2 6.7 3.9 1.1 6.7 2.7 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-rbx1 PF12678.2 gi|407464277|ref|YP_006775159.1| - 1.5 8.9 6.7 2.1 8.5 4.6 1.4 1 1 0 1 1 1 0 RING-H2 zinc finger DZR PF12773.2 gi|407464277|ref|YP_006775159.1| - 2.1 8.2 9.9 6.1 6.7 6.9 1.8 1 1 0 1 1 1 0 Double zinc ribbon DNA_RNApol_7kD PF03604.8 gi|407464277|ref|YP_006775159.1| - 4.1 6.9 10.2 84 2.7 7.1 2.4 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf-C2H2_3 PF13878.1 gi|407464277|ref|YP_006775159.1| - 5.5 6.6 9.5 1.4 8.5 0.5 3.1 2 1 1 3 3 3 0 zinc-finger of acetyl-transferase ESCO HTH_20 PF12840.2 gi|407464278|ref|YP_006775160.1| - 1.2e-06 28.2 0.0 2.4e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|407464278|ref|YP_006775160.1| - 2.7e-06 26.6 0.4 2e-05 23.8 0.1 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|407464278|ref|YP_006775160.1| - 2.2e-05 24.0 0.0 0.00022 20.7 0.0 2.1 2 0 0 2 2 2 1 MarR family MarR PF01047.17 gi|407464278|ref|YP_006775160.1| - 0.00076 19.1 0.5 0.018 14.7 0.1 2.3 2 0 0 2 2 2 1 MarR family HTH_5 PF01022.15 gi|407464278|ref|YP_006775160.1| - 0.0014 18.2 0.6 0.0037 16.8 0.0 2.1 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family DUF4423 PF14394.1 gi|407464278|ref|YP_006775160.1| - 0.0016 17.9 0.0 0.003 17.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_45 PF14947.1 gi|407464278|ref|YP_006775160.1| - 0.0019 17.9 0.7 0.01 15.6 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix Sulfolobus_pRN PF05584.6 gi|407464278|ref|YP_006775160.1| - 0.0037 17.1 0.3 0.055 13.4 0.0 2.3 2 0 0 2 2 2 1 Sulfolobus plasmid regulatory protein DUF2250 PF10007.4 gi|407464278|ref|YP_006775160.1| - 0.0062 16.4 1.0 0.25 11.2 0.0 2.5 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_27 PF13463.1 gi|407464278|ref|YP_006775160.1| - 0.015 15.5 0.2 0.052 13.8 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain TrmB PF01978.14 gi|407464278|ref|YP_006775160.1| - 0.027 14.1 0.1 0.21 11.2 0.0 2.3 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|407464278|ref|YP_006775160.1| - 0.047 13.7 0.0 0.12 12.3 0.0 1.8 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|407464278|ref|YP_006775160.1| - 0.057 13.0 0.1 0.12 12.0 0.1 1.4 1 0 0 1 1 1 0 HTH domain Phage_rep_org_N PF09681.5 gi|407464278|ref|YP_006775160.1| - 0.078 12.5 0.4 0.16 11.5 0.0 1.7 2 0 0 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) TB PF00683.12 gi|407464279|ref|YP_006775161.1| - 0.3 10.6 2.7 0.51 9.9 1.9 1.4 1 0 0 1 1 1 0 TB domain Usp PF00582.21 gi|407464280|ref|YP_006775162.1| - 1.5e-11 44.6 0.0 2e-11 44.2 0.0 1.2 1 0 0 1 1 1 1 Universal stress protein family Fcf1 PF04900.7 gi|407464280|ref|YP_006775162.1| - 0.072 13.1 2.3 0.059 13.4 0.7 1.6 2 0 0 2 2 2 0 Fcf1 Arg_tRNA_synt_N PF03485.11 gi|407464280|ref|YP_006775162.1| - 0.11 13.1 0.1 0.75 10.3 0.0 2.1 2 0 0 2 2 2 0 Arginyl tRNA synthetase N terminal domain HTH_45 PF14947.1 gi|407464281|ref|YP_006775163.1| - 1.7e-05 24.5 0.3 2.7e-05 23.8 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix Arch_flagellin PF01917.11 gi|407464282|ref|YP_006775164.1| - 0.0069 16.0 1.2 0.0069 16.0 0.8 1.9 1 1 1 2 2 2 2 Archaebacterial flagellin DUF4110 PF13422.1 gi|407464284|ref|YP_006775166.1| - 1.2 9.0 3.9 14 5.6 0.3 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4110) HCNGP PF07818.8 gi|407464285|ref|YP_006775167.1| - 0.049 13.6 0.3 0.049 13.6 0.2 1.8 2 0 0 2 2 2 0 HCNGP-like protein HSP20 PF00011.16 gi|407464286|ref|YP_006775168.1| - 1.1e-11 44.4 1.5 1.4e-10 40.9 1.0 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family PIH1 PF08190.7 gi|407464286|ref|YP_006775168.1| - 4.8e-06 26.2 0.1 5.8e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 pre-RNA processing PIH1/Nop17 CS PF04969.11 gi|407464286|ref|YP_006775168.1| - 0.019 15.4 1.1 0.029 14.8 0.8 1.4 1 0 0 1 1 1 0 CS domain zf-C3HC4_3 PF13920.1 gi|407464287|ref|YP_006775169.1| - 0.0066 16.0 1.0 0.0066 16.0 0.7 2.2 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) HypA PF01155.14 gi|407464287|ref|YP_006775169.1| - 0.16 11.6 7.1 0.29 10.8 3.3 1.9 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family DZR PF12773.2 gi|407464287|ref|YP_006775169.1| - 0.19 11.5 10.9 0.52 10.1 7.6 1.9 1 1 0 1 1 1 0 Double zinc ribbon FYVE PF01363.16 gi|407464287|ref|YP_006775169.1| - 0.67 9.8 7.3 0.87 9.5 5.0 1.2 1 0 0 1 1 1 0 FYVE zinc finger zinc-ribbons_6 PF07191.7 gi|407464287|ref|YP_006775169.1| - 2.3 8.0 9.6 0.35 10.6 2.5 2.0 1 1 1 2 2 2 0 zinc-ribbons Stc1 PF12898.2 gi|407464287|ref|YP_006775169.1| - 2.5 8.2 9.5 0.15 12.1 1.1 2.0 1 1 1 2 2 2 0 Stc1 domain Nudix_N_2 PF14803.1 gi|407464287|ref|YP_006775169.1| - 3.1 7.5 11.3 0.48 10.1 4.9 2.1 2 1 0 2 2 2 0 Nudix N-terminal zinc_ribbon_2 PF13240.1 gi|407464287|ref|YP_006775169.1| - 5.5 6.6 10.9 25 4.5 2.9 3.3 1 1 1 2 2 2 0 zinc-ribbon domain DnaJ_CXXCXGXG PF00684.14 gi|407464287|ref|YP_006775169.1| - 5.9 7.0 10.1 1.1 9.3 1.5 2.0 1 1 1 2 2 2 0 DnaJ central domain DUF302 PF03625.9 gi|407464289|ref|YP_006775171.1| - 3.5e-18 64.9 0.0 5e-18 64.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF302 DUF1128 PF06569.6 gi|407464289|ref|YP_006775171.1| - 0.16 11.6 0.5 0.62 9.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1128) FUR PF01475.14 gi|407464291|ref|YP_006775173.1| - 1.8e-32 111.7 0.5 2.2e-32 111.4 0.4 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_20 PF12840.2 gi|407464291|ref|YP_006775173.1| - 0.017 14.9 0.0 0.026 14.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|407464291|ref|YP_006775173.1| - 0.033 14.2 0.1 0.051 13.6 0.1 1.3 1 0 0 1 1 1 0 Penicillinase repressor TrmB PF01978.14 gi|407464291|ref|YP_006775173.1| - 0.034 13.8 0.1 0.24 11.1 0.1 2.2 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB ERCC4 PF02732.10 gi|407464291|ref|YP_006775173.1| - 0.079 12.7 0.1 0.089 12.5 0.1 1.2 1 0 0 1 1 1 0 ERCC4 domain zf-B_box PF00643.19 gi|407464291|ref|YP_006775173.1| - 0.081 12.8 1.9 6.9 6.6 0.1 2.3 2 0 0 2 2 2 0 B-box zinc finger Phage_FRD3 PF05798.6 gi|407464291|ref|YP_006775173.1| - 0.083 13.2 0.1 0.28 11.5 0.0 1.9 2 0 0 2 2 2 0 Bacteriophage FRD3 protein HTH_32 PF13565.1 gi|407464291|ref|YP_006775173.1| - 0.1 13.4 0.1 0.3 11.9 0.0 1.8 1 1 0 1 1 1 0 Homeodomain-like domain Prok-RING_4 PF14447.1 gi|407464292|ref|YP_006775174.1| - 0.026 14.0 0.5 0.026 14.0 0.4 1.6 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zf-IS66 PF13005.2 gi|407464292|ref|YP_006775174.1| - 0.074 13.0 1.5 0.13 12.2 0.3 1.9 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 DUF2321 PF10083.4 gi|407464292|ref|YP_006775174.1| - 0.44 10.0 2.7 0.56 9.6 1.9 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) UPF0547 PF10571.4 gi|407464292|ref|YP_006775174.1| - 0.68 9.6 6.3 16 5.2 3.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-C3HC4_3 PF13920.1 gi|407464292|ref|YP_006775174.1| - 0.68 9.6 8.8 1.2 8.8 6.1 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) eRF1_2 PF03464.10 gi|407464293|ref|YP_006775175.1| - 8.6e-15 55.2 2.6 8.7e-15 55.2 0.5 2.0 2 0 0 2 2 2 1 eRF1 domain 2 eRF1_3 PF03465.10 gi|407464293|ref|YP_006775175.1| - 0.003 17.8 0.5 0.003 17.8 0.3 2.5 2 2 0 2 2 2 1 eRF1 domain 3 F-actin_cap_A PF01267.12 gi|407464293|ref|YP_006775175.1| - 0.012 14.6 0.1 0.024 13.6 0.1 1.5 1 0 0 1 1 1 0 F-actin capping protein alpha subunit DAO PF01266.19 gi|407464294|ref|YP_006775176.1| - 1e-37 129.9 0.0 1.3e-37 129.5 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Mqo PF06039.10 gi|407464294|ref|YP_006775176.1| - 4.2e-09 35.1 0.0 0.002 16.4 0.0 2.4 2 1 0 2 2 2 2 Malate:quinone oxidoreductase (Mqo) FAD_binding_3 PF01494.14 gi|407464294|ref|YP_006775176.1| - 4.3e-06 26.0 0.0 0.024 13.6 0.0 2.1 2 0 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.7 gi|407464294|ref|YP_006775176.1| - 4.7e-05 22.4 0.0 0.015 14.2 0.0 2.2 2 0 0 2 2 2 2 Lycopene cyclase protein Pyr_redox_2 PF07992.9 gi|407464294|ref|YP_006775176.1| - 0.0014 18.5 0.0 0.067 13.0 0.0 2.3 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|407464294|ref|YP_006775176.1| - 0.0032 17.8 0.1 1.1 9.6 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|407464294|ref|YP_006775176.1| - 0.0035 17.3 0.0 0.01 15.8 0.0 1.8 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|407464294|ref|YP_006775176.1| - 0.0071 15.4 0.0 0.012 14.7 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Trp_halogenase PF04820.9 gi|407464294|ref|YP_006775176.1| - 0.013 14.1 0.2 0.29 9.7 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase HI0933_like PF03486.9 gi|407464294|ref|YP_006775176.1| - 0.16 10.4 0.0 3.4 6.0 0.0 2.2 2 0 0 2 2 2 0 HI0933-like protein CBS PF00571.23 gi|407464295|ref|YP_006775177.1| - 3.1e-05 23.6 2.9 0.19 11.5 0.0 4.2 5 0 0 5 5 5 2 CBS domain NusA_N PF08529.6 gi|407464295|ref|YP_006775177.1| - 0.079 12.9 1.2 0.15 12.0 0.8 1.4 1 0 0 1 1 1 0 NusA N-terminal domain ChuX_HutX PF06228.8 gi|407464297|ref|YP_006775179.1| - 1.3e-13 50.5 0.0 1.6e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Haem utilisation ChuX/HutX HemS PF05171.7 gi|407464297|ref|YP_006775179.1| - 9.8e-10 38.3 0.0 1.2e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Haemin-degrading HemS.ChuX domain 2-Hacid_dh_C PF02826.14 gi|407464298|ref|YP_006775180.1| - 2.7e-62 209.0 0.0 4e-62 208.5 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|407464298|ref|YP_006775180.1| - 1.2e-31 108.9 0.0 1.3e-31 108.7 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.10 gi|407464298|ref|YP_006775180.1| - 4.5e-09 36.3 0.1 8.1e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.7 gi|407464298|ref|YP_006775180.1| - 6.3e-06 25.6 0.2 1.5e-05 24.4 0.1 1.6 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.12 gi|407464298|ref|YP_006775180.1| - 0.0013 19.0 0.0 0.0037 17.6 0.0 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.9 gi|407464298|ref|YP_006775180.1| - 0.0033 16.8 0.6 0.53 9.6 0.1 3.0 2 1 1 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.1 gi|407464298|ref|YP_006775180.1| - 0.053 13.7 0.1 0.14 12.4 0.1 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding zinc_ribbon_2 PF13240.1 gi|407464299|ref|YP_006775181.1| - 0.45 10.0 10.4 1 8.9 7.2 1.7 1 1 0 1 1 1 0 zinc-ribbon domain POR_N PF01855.14 gi|407464300|ref|YP_006775182.1| - 3.2e-57 193.7 0.0 4.7e-57 193.1 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.13 gi|407464300|ref|YP_006775182.1| - 2.1e-29 102.6 0.0 4.1e-29 101.6 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Transketolase_C PF02780.15 gi|407464300|ref|YP_006775182.1| - 1.8e-05 24.6 0.0 4.9e-05 23.2 0.0 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.13 gi|407464300|ref|YP_006775182.1| - 0.0004 19.9 0.0 0.0007 19.1 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|407464301|ref|YP_006775183.1| - 3.6e-29 101.3 0.2 6.3e-29 100.5 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.3 gi|407464301|ref|YP_006775183.1| - 5.8e-08 32.5 0.1 2.4e-05 24.1 0.1 2.6 1 1 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal Glyco_hydro_42C PF08533.5 gi|407464303|ref|YP_006775185.1| - 0.068 12.6 0.6 0.23 10.9 0.0 2.1 3 0 0 3 3 3 0 Beta-galactosidase C-terminal domain DUF684 PF05075.9 gi|407464305|ref|YP_006775187.1| - 0.018 13.6 0.3 0.029 12.9 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF684) DUF473 PF04322.7 gi|407464305|ref|YP_006775187.1| - 0.093 12.3 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF473) F420_ligase PF01996.11 gi|407464306|ref|YP_006775188.1| - 1e-52 178.5 0.1 1.1e-52 178.3 0.1 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Aconitase PF00330.15 gi|407464307|ref|YP_006775189.1| - 1.4e-78 264.4 1.7 9.9e-54 182.5 0.1 2.1 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) GRDA PF04723.9 gi|407464307|ref|YP_006775189.1| - 0.012 15.2 0.0 0.045 13.4 0.0 1.9 2 0 0 2 2 2 0 Glycine reductase complex selenoprotein A Aconitase_C PF00694.14 gi|407464308|ref|YP_006775190.1| - 1.2e-21 77.2 0.1 4.4e-20 72.1 0.0 2.2 1 1 1 2 2 2 2 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|407464308|ref|YP_006775190.1| - 0.021 14.2 0.3 0.35 10.2 0.1 2.0 1 1 1 2 2 2 0 Aconitate hydratase 2 N-terminus Antitoxin-MazE PF04014.13 gi|407464308|ref|YP_006775190.1| - 0.081 12.6 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Antidote-toxin recognition MazE Aconitase PF00330.15 gi|407464309|ref|YP_006775191.1| - 4.7e-167 556.1 0.0 5.3e-167 555.9 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.14 gi|407464310|ref|YP_006775192.1| - 8.7e-40 135.8 0.0 1.4e-39 135.2 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|407464310|ref|YP_006775192.1| - 0.0023 17.4 0.1 0.092 12.1 0.0 2.2 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Pox_I1 PF03289.8 gi|407464310|ref|YP_006775192.1| - 0.021 13.6 1.7 0.025 13.4 0.4 1.7 2 0 0 2 2 2 0 Poxvirus protein I1 FAD_syn PF06574.7 gi|407464310|ref|YP_006775192.1| - 0.098 12.2 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 FAD synthetase NTP_transferase PF00483.18 gi|407464311|ref|YP_006775193.1| - 2.4e-19 69.6 0.1 2.9e-19 69.3 0.1 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|407464311|ref|YP_006775193.1| - 1.1e-12 48.2 0.0 1.2e-12 48.1 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|407464311|ref|YP_006775193.1| - 0.00097 18.8 0.0 0.0021 17.7 0.0 1.6 1 0 0 1 1 1 1 Cytidylyltransferase IspD PF01128.14 gi|407464311|ref|YP_006775193.1| - 0.021 14.3 0.0 0.028 13.9 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ribosomal_S9 PF00380.14 gi|407464312|ref|YP_006775194.1| - 3.4e-36 124.1 0.4 3.9e-36 123.9 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.13 gi|407464313|ref|YP_006775195.1| - 9e-26 90.4 0.2 1.2e-25 90.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L13 NCD1 PF04904.8 gi|407464313|ref|YP_006775195.1| - 0.059 13.1 0.0 0.093 12.4 0.0 1.3 1 0 0 1 1 1 0 NAB conserved region 1 (NCD1) Ribosomal_L18e PF00828.14 gi|407464314|ref|YP_006775196.1| - 2.6e-08 34.2 0.1 3.3e-08 33.9 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 Aconitase_2_N PF06434.8 gi|407464314|ref|YP_006775196.1| - 0.029 13.7 0.0 0.041 13.2 0.0 1.3 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus RNA_pol_A_bac PF01000.21 gi|407464315|ref|YP_006775197.1| - 1.7e-25 89.3 0.0 3e-25 88.5 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.19 gi|407464315|ref|YP_006775197.1| - 3.2e-10 38.9 0.0 4.2e-10 38.5 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain SBDS PF01172.13 gi|407464317|ref|YP_006775199.1| - 1.1e-26 92.4 0.0 1.8e-26 91.7 0.0 1.4 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.5 gi|407464317|ref|YP_006775199.1| - 4.7e-21 74.7 0.3 7e-21 74.2 0.2 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.19 gi|407464317|ref|YP_006775199.1| - 0.06 13.2 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Elongation factor G C-terminus KH_1 PF00013.24 gi|407464318|ref|YP_006775200.1| - 6.6e-12 44.8 0.1 1.8e-11 43.5 0.1 1.7 1 0 0 1 1 1 1 KH domain KH_3 PF13014.1 gi|407464318|ref|YP_006775200.1| - 3.5e-05 23.3 0.0 8.4e-05 22.1 0.0 1.7 1 0 0 1 1 1 1 KH domain KH_2 PF07650.12 gi|407464318|ref|YP_006775200.1| - 0.0017 17.8 0.0 0.0041 16.6 0.0 1.6 1 0 0 1 1 1 1 KH domain KH_4 PF13083.1 gi|407464318|ref|YP_006775200.1| - 0.015 14.9 0.0 0.042 13.4 0.0 1.7 1 0 0 1 1 1 0 KH domain RNase_PH PF01138.16 gi|407464319|ref|YP_006775201.1| - 2.1e-35 121.9 0.0 2.8e-35 121.5 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|407464319|ref|YP_006775201.1| - 1.2e-14 54.0 0.4 2.6e-14 52.8 0.3 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.16 gi|407464320|ref|YP_006775202.1| - 3.4e-23 82.4 0.0 5.5e-23 81.7 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|407464320|ref|YP_006775202.1| - 1.5e-13 50.4 0.2 1.1e-12 47.6 0.0 2.3 2 0 0 2 2 2 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.14 gi|407464321|ref|YP_006775203.1| - 4.2e-20 71.4 2.8 4.4e-20 71.3 1.9 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.2 gi|407464321|ref|YP_006775203.1| - 0.00027 20.6 2.8 0.00049 19.8 1.9 1.5 1 0 0 1 1 1 1 Transposase zinc-ribbon domain C1_1 PF00130.17 gi|407464321|ref|YP_006775203.1| - 0.0018 17.9 1.6 0.0027 17.4 1.1 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) DZR PF12773.2 gi|407464321|ref|YP_006775203.1| - 0.0028 17.4 0.5 0.0042 16.8 0.3 1.3 1 0 0 1 1 1 1 Double zinc ribbon OrfB_Zn_ribbon PF07282.6 gi|407464321|ref|YP_006775203.1| - 0.023 14.3 3.3 0.043 13.4 2.3 1.6 1 1 0 1 1 1 0 Putative transposase DNA-binding domain GCC2_GCC3 PF07699.8 gi|407464321|ref|YP_006775203.1| - 0.025 14.1 1.0 0.034 13.7 0.7 1.3 1 0 0 1 1 1 0 GCC2 and GCC3 DNA_ligase_ZBD PF03119.11 gi|407464321|ref|YP_006775203.1| - 0.04 13.6 0.1 0.068 12.8 0.1 1.4 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Fusion_gly_K PF01621.12 gi|407464321|ref|YP_006775203.1| - 0.046 12.7 0.0 0.05 12.6 0.0 1.0 1 0 0 1 1 1 0 Cell fusion glycoprotein K Zn-ribbon_8 PF09723.5 gi|407464321|ref|YP_006775203.1| - 0.061 13.2 1.6 0.28 11.1 0.1 2.1 2 0 0 2 2 2 0 Zinc ribbon domain Rubredoxin PF00301.15 gi|407464321|ref|YP_006775203.1| - 0.087 12.7 0.8 12 5.8 0.0 2.2 2 0 0 2 2 2 0 Rubredoxin GFA PF04828.9 gi|407464321|ref|YP_006775203.1| - 0.097 12.6 1.8 0.26 11.2 0.1 1.9 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-ribbon_3 PF13248.1 gi|407464321|ref|YP_006775203.1| - 0.12 11.6 4.4 0.81 8.9 3.1 2.0 1 1 1 2 2 2 0 zinc-ribbon domain Prok-RING_1 PF14446.1 gi|407464321|ref|YP_006775203.1| - 0.13 12.0 1.0 0.22 11.2 0.7 1.4 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 A2L_zn_ribbon PF08792.5 gi|407464321|ref|YP_006775203.1| - 0.14 11.6 3.3 1.8 8.1 0.0 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|407464321|ref|YP_006775203.1| - 0.15 11.4 2.4 0.31 10.3 1.7 1.5 1 1 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.1 gi|407464321|ref|YP_006775203.1| - 0.15 11.6 1.7 0.69 9.4 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain NOB1_Zn_bind PF08772.6 gi|407464321|ref|YP_006775203.1| - 0.18 11.6 2.4 0.32 10.8 1.2 1.9 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Ribosomal_S27 PF01599.14 gi|407464321|ref|YP_006775203.1| - 0.19 11.5 1.9 0.3 10.9 1.3 1.4 1 1 0 1 1 1 0 Ribosomal protein S27a zf-ISL3 PF14690.1 gi|407464321|ref|YP_006775203.1| - 0.21 11.6 3.2 0.34 10.9 0.1 2.4 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RNA_POL_M_15KD PF02150.11 gi|407464321|ref|YP_006775203.1| - 0.43 10.3 2.4 1.3 8.7 1.6 1.7 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit DUF2082 PF09855.4 gi|407464321|ref|YP_006775203.1| - 0.73 9.7 3.9 3.3 7.6 0.0 2.3 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) UPF0547 PF10571.4 gi|407464321|ref|YP_006775203.1| - 0.73 9.5 4.5 3.3 7.4 3.1 1.9 1 1 1 2 2 2 0 Uncharacterised protein family UPF0547 zf-H2C2_2 PF13465.1 gi|407464321|ref|YP_006775203.1| - 0.79 10.1 3.9 4.1 7.8 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger double domain Prim_Zn_Ribbon PF08273.7 gi|407464321|ref|YP_006775203.1| - 1.1 9.4 4.2 3.1 7.9 2.9 1.7 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase zf-RanBP PF00641.13 gi|407464321|ref|YP_006775203.1| - 3.9 6.6 6.9 1 8.5 0.7 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Pcc1 PF09341.5 gi|407464322|ref|YP_006775204.1| - 5.8e-06 26.2 0.0 6.3e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 Prefoldin_2 PF01920.15 gi|407464323|ref|YP_006775205.1| - 3.7e-21 74.8 22.7 4.1e-21 74.7 15.8 1.0 1 0 0 1 1 1 1 Prefoldin subunit DUF3053 PF11254.3 gi|407464323|ref|YP_006775205.1| - 0.092 11.9 5.1 0.16 11.2 3.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3053) AF0941-like PF14591.1 gi|407464323|ref|YP_006775205.1| - 0.3 11.1 10.3 2.9 7.9 0.9 2.1 1 1 1 2 2 2 0 AF0941-like Peptidase_S46 PF10459.4 gi|407464323|ref|YP_006775205.1| - 0.62 8.4 5.4 0.7 8.2 3.7 1.0 1 0 0 1 1 1 0 Peptidase S46 KIP1 PF07765.7 gi|407464323|ref|YP_006775205.1| - 0.62 9.9 9.6 12 5.7 0.3 3.0 1 1 1 2 2 2 0 KIP1-like protein TPR_MLP1_2 PF07926.7 gi|407464323|ref|YP_006775205.1| - 0.75 9.5 17.1 1.7 8.4 4.3 2.2 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein FixO PF02433.10 gi|407464323|ref|YP_006775205.1| - 0.81 9.0 3.6 1 8.6 2.5 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO DUF4407 PF14362.1 gi|407464323|ref|YP_006775205.1| - 1.4 7.8 8.9 1.7 7.5 6.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SseC PF04888.7 gi|407464323|ref|YP_006775205.1| - 1.5 8.1 11.5 2.3 7.4 8.0 1.3 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family YlqD PF11068.3 gi|407464323|ref|YP_006775205.1| - 1.8 8.6 19.3 2.8 7.9 3.4 2.0 1 1 1 2 2 2 0 YlqD protein Sld5 PF05916.6 gi|407464323|ref|YP_006775205.1| - 2.1 8.7 7.3 4 7.7 5.0 1.6 1 1 0 1 1 1 0 GINS complex protein MinC_N PF05209.8 gi|407464323|ref|YP_006775205.1| - 2.1 8.1 7.4 7.2 6.4 0.4 2.1 1 1 1 2 2 2 0 Septum formation inhibitor MinC, N-terminal domain GBP_C PF02841.9 gi|407464323|ref|YP_006775205.1| - 4.3 6.4 17.0 5.5 6.0 11.8 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF342 PF03961.8 gi|407464323|ref|YP_006775205.1| - 4.8 5.4 11.4 6.6 5.0 7.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF342) DUF4559 PF15112.1 gi|407464323|ref|YP_006775205.1| - 6 5.9 9.7 7.8 5.5 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) SlyX PF04102.7 gi|407464323|ref|YP_006775205.1| - 7.3 7.0 14.8 0.91 9.9 0.5 3.2 2 1 1 3 3 3 0 SlyX ERCC4 PF02732.10 gi|407464324|ref|YP_006775206.1| - 1.4e-24 86.4 0.0 2.9e-24 85.4 0.0 1.5 2 0 0 2 2 2 1 ERCC4 domain HHH_5 PF14520.1 gi|407464324|ref|YP_006775206.1| - 1.9e-07 31.1 0.0 5.2e-07 29.7 0.0 1.7 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|407464324|ref|YP_006775206.1| - 4.3e-06 26.5 0.0 4e-05 23.4 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH PF00633.18 gi|407464324|ref|YP_006775206.1| - 0.00016 21.1 0.1 0.019 14.6 0.1 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.2 gi|407464324|ref|YP_006775206.1| - 0.0054 16.6 0.0 0.23 11.4 0.0 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix motif PIN PF01850.16 gi|407464325|ref|YP_006775207.1| - 4.2e-07 30.3 0.1 5.9e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 PIN domain UPF0278 PF08745.6 gi|407464325|ref|YP_006775207.1| - 6.7e-05 22.2 0.0 0.0018 17.5 0.0 2.0 2 0 0 2 2 2 1 UPF0278 family zf-LITAF-like PF10601.4 gi|407464325|ref|YP_006775207.1| - 0.019 14.8 1.0 0.4 10.5 0.0 2.3 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain DZR PF12773.2 gi|407464325|ref|YP_006775207.1| - 0.021 14.6 0.7 0.036 13.8 0.5 1.3 1 0 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.5 gi|407464325|ref|YP_006775207.1| - 1.2 9.1 3.9 14 5.7 2.9 2.2 1 1 1 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.1 gi|407464325|ref|YP_006775207.1| - 1.7 7.9 6.8 6.9 6.0 4.7 1.9 1 1 0 1 1 1 0 zinc-ribbon domain NAD_kinase PF01513.16 gi|407464326|ref|YP_006775208.1| - 1.5e-36 125.6 1.6 2.1e-36 125.1 1.1 1.2 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.19 gi|407464326|ref|YP_006775208.1| - 0.0019 17.6 0.1 0.0043 16.4 0.1 1.6 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain CoA_binding_2 PF13380.1 gi|407464326|ref|YP_006775208.1| - 0.017 15.2 0.0 0.035 14.2 0.0 1.6 1 0 0 1 1 1 0 CoA binding domain ELL PF10390.4 gi|407464326|ref|YP_006775208.1| - 0.18 10.9 0.3 0.4 9.8 0.1 1.6 2 0 0 2 2 2 0 RNA polymerase II elongation factor ELL Rhodanese PF00581.15 gi|407464327|ref|YP_006775209.1| - 2.6e-37 127.6 0.1 5.9e-23 81.3 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain Exo_endo_phos PF03372.18 gi|407464327|ref|YP_006775209.1| - 0.034 14.0 0.1 2.5 7.9 0.0 2.2 1 1 1 2 2 2 0 Endonuclease/Exonuclease/phosphatase family Fer4 PF00037.22 gi|407464329|ref|YP_006775211.1| - 4.3e-08 32.4 16.0 0.00014 21.3 2.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|407464329|ref|YP_006775211.1| - 1.7e-06 28.2 4.5 3.7e-06 27.2 3.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|407464329|ref|YP_006775211.1| - 1.8e-06 28.1 4.7 3.9e-06 27.0 3.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|407464329|ref|YP_006775211.1| - 3.6e-06 26.6 5.0 7.9e-06 25.5 3.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|407464329|ref|YP_006775211.1| - 7.5e-05 22.5 2.9 0.00012 21.8 2.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|407464329|ref|YP_006775211.1| - 0.00022 20.9 13.1 0.0035 17.1 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|407464329|ref|YP_006775211.1| - 0.0013 19.1 2.7 0.71 10.3 0.5 2.8 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|407464329|ref|YP_006775211.1| - 0.0019 18.1 4.0 0.019 14.9 3.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|407464329|ref|YP_006775211.1| - 0.0058 16.9 1.3 2.6 8.4 0.0 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|407464329|ref|YP_006775211.1| - 0.0078 16.0 11.0 0.077 12.9 0.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|407464329|ref|YP_006775211.1| - 0.053 13.8 5.1 4.1 7.9 0.8 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|407464329|ref|YP_006775211.1| - 0.12 12.9 15.1 0.22 12.1 1.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|407464329|ref|YP_006775211.1| - 0.56 11.0 7.0 4.8 8.0 1.4 2.7 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_13 PF13370.1 gi|407464329|ref|YP_006775211.1| - 0.91 9.9 9.3 0.8 10.1 0.4 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|407464329|ref|YP_006775211.1| - 8.9 6.9 14.5 0.53 10.8 0.6 3.0 4 0 0 4 4 2 0 4Fe-4S single cluster domain Glyco_tranf_2_3 PF13641.1 gi|407464330|ref|YP_006775212.1| - 2.7e-39 135.2 0.0 4e-39 134.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|407464330|ref|YP_006775212.1| - 5.8e-24 84.8 0.3 5.8e-24 84.8 0.2 2.1 3 0 0 3 3 3 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.21 gi|407464330|ref|YP_006775212.1| - 1.7e-18 66.8 0.1 4e-18 65.6 0.1 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|407464330|ref|YP_006775212.1| - 4.3e-15 55.4 0.1 7.5e-15 54.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Cellulose_synt PF03552.9 gi|407464330|ref|YP_006775212.1| - 0.0029 15.9 1.5 0.012 13.9 0.1 2.1 2 0 0 2 2 2 1 Cellulose synthase Glyco_tranf_2_4 PF13704.1 gi|407464330|ref|YP_006775212.1| - 0.0049 17.1 0.5 0.074 13.3 0.3 2.7 3 0 0 3 3 3 1 Glycosyl transferase family 2 NPV_P10 PF05531.7 gi|407464331|ref|YP_006775213.1| - 0.0007 19.8 33.6 0.24 11.6 0.6 6.8 1 1 5 6 6 6 3 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.7 gi|407464331|ref|YP_006775213.1| - 0.0011 18.7 35.5 0.049 13.4 1.2 5.3 1 1 5 6 6 6 3 Protein of unknown function (DUF1664) BLOC1_2 PF10046.4 gi|407464331|ref|YP_006775213.1| - 0.002 18.2 38.9 0.2 11.7 0.2 6.5 1 1 7 8 8 8 4 Biogenesis of lysosome-related organelles complex-1 subunit 2 NAS PF03059.11 gi|407464331|ref|YP_006775213.1| - 0.009 15.1 1.5 0.009 15.1 1.0 2.1 2 0 0 2 2 2 1 Nicotianamine synthase protein Laminin_II PF06009.7 gi|407464331|ref|YP_006775213.1| - 0.015 15.0 39.3 1.4 8.6 3.4 4.6 1 1 3 4 4 4 0 Laminin Domain II MCPsignal PF00015.16 gi|407464331|ref|YP_006775213.1| - 0.016 14.7 39.4 0.14 11.7 4.6 4.4 1 1 3 4 4 4 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Occludin_ELL PF07303.8 gi|407464331|ref|YP_006775213.1| - 0.028 15.1 20.9 5.2 7.8 3.3 5.3 1 1 5 6 6 6 0 Occludin homology domain DUF869 PF05911.6 gi|407464331|ref|YP_006775213.1| - 0.031 12.5 45.6 0.028 12.6 21.8 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF869) Spc7 PF08317.6 gi|407464331|ref|YP_006775213.1| - 0.051 12.2 42.9 0.48 9.0 6.4 3.6 1 1 3 4 4 4 0 Spc7 kinetochore protein Sec34 PF04136.10 gi|407464331|ref|YP_006775213.1| - 0.083 12.5 26.8 0.067 12.8 2.4 4.8 2 1 3 5 5 5 0 Sec34-like family AAA_13 PF13166.1 gi|407464331|ref|YP_006775213.1| - 0.098 11.0 40.9 0.41 9.0 14.1 2.7 1 1 1 2 2 2 0 AAA domain IncA PF04156.9 gi|407464331|ref|YP_006775213.1| - 0.14 11.7 34.3 4.4 6.8 2.8 4.3 1 1 2 3 3 3 0 IncA protein DUF948 PF06103.6 gi|407464331|ref|YP_006775213.1| - 0.43 10.4 31.6 2.1 8.2 0.1 6.2 3 2 4 7 7 7 0 Bacterial protein of unknown function (DUF948) DUF2756 PF10956.3 gi|407464331|ref|YP_006775213.1| - 0.84 9.9 7.7 2 8.6 5.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2756) Allexi_40kDa PF05549.6 gi|407464331|ref|YP_006775213.1| - 1.1 8.4 30.9 0.52 9.5 6.6 4.4 1 1 4 5 5 5 0 Allexivirus 40kDa protein TipAS PF07739.8 gi|407464331|ref|YP_006775213.1| - 1.2 9.4 6.2 2 8.7 0.9 2.8 2 1 0 2 2 2 0 TipAS antibiotic-recognition domain DASH_Dam1 PF08653.5 gi|407464331|ref|YP_006775213.1| - 3.2 7.5 7.7 73 3.2 0.0 5.3 4 1 1 6 6 6 0 DASH complex subunit Dam1 HD_4 PF13328.1 gi|407464331|ref|YP_006775213.1| - 3.4 7.3 6.2 1.2 8.8 1.1 2.5 2 1 1 3 3 3 0 HD domain AIP3 PF03915.8 gi|407464331|ref|YP_006775213.1| - 6.5 5.5 40.7 0.16 10.8 5.1 3.5 1 1 3 4 4 4 0 Actin interacting protein 3 DUF4361 PF14274.1 gi|407464331|ref|YP_006775213.1| - 6.9 6.3 8.8 0.28 10.8 0.9 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4361) Na_H_Exchanger PF00999.16 gi|407464332|ref|YP_006775214.1| - 6.9e-57 192.6 57.4 8.9e-57 192.3 39.8 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Spore_YabQ PF09578.5 gi|407464332|ref|YP_006775214.1| - 0.014 15.3 0.2 0.014 15.3 0.1 3.9 4 2 1 5 5 5 0 Spore cortex protein YabQ (Spore_YabQ) YmgB PF10798.3 gi|407464334|ref|YP_006775216.1| - 0.046 13.5 0.7 0.091 12.5 0.5 1.5 1 0 0 1 1 1 0 Biofilm development protein YmgB/AriR B56 PF01603.15 gi|407464334|ref|YP_006775216.1| - 0.048 12.2 0.2 0.051 12.1 0.2 1.1 1 0 0 1 1 1 0 Protein phosphatase 2A regulatory B subunit (B56 family) Ribosomal_L16 PF00252.13 gi|407464335|ref|YP_006775217.1| - 7.3e-23 80.7 0.5 9.1e-23 80.4 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e PYNP_C PF07831.8 gi|407464335|ref|YP_006775217.1| - 0.0033 16.8 0.0 0.006 16.0 0.0 1.4 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain tRNA_int_endo PF01974.12 gi|407464336|ref|YP_006775218.1| - 6.4e-20 70.7 0.1 1.3e-19 69.7 0.0 1.5 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.9 gi|407464336|ref|YP_006775218.1| - 1.7e-12 46.7 2.7 1e-10 40.9 0.1 2.4 2 0 0 2 2 2 2 tRNA intron endonuclease, N-terminal domain BAF PF02961.9 gi|407464336|ref|YP_006775218.1| - 0.09 13.0 0.1 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 Barrier to autointegration factor DUF1451 PF07295.6 gi|407464337|ref|YP_006775219.1| - 0.017 14.8 0.2 0.077 12.7 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1451) Acetyltransf_1 PF00583.19 gi|407464338|ref|YP_006775220.1| - 3e-13 49.6 0.1 4e-13 49.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|407464338|ref|YP_006775220.1| - 2.4e-09 37.3 0.0 2.9e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|407464338|ref|YP_006775220.1| - 2.8e-09 37.0 0.1 3.8e-09 36.5 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|407464338|ref|YP_006775220.1| - 3.8e-08 33.4 0.0 4.9e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|407464338|ref|YP_006775220.1| - 2.3e-05 24.2 0.0 4.1e-05 23.5 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|407464338|ref|YP_006775220.1| - 0.00012 21.9 0.0 0.00016 21.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF1672 PF07901.6 gi|407464338|ref|YP_006775220.1| - 0.02 13.9 0.1 0.03 13.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1672) FR47 PF08445.5 gi|407464338|ref|YP_006775220.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein Metallothio PF00131.15 gi|407464340|ref|YP_006775222.1| - 0.0061 16.4 14.9 0.0061 16.4 10.4 1.9 1 1 1 2 2 2 1 Metallothionein VESA1_N PF12785.2 gi|407464340|ref|YP_006775222.1| - 1.9 7.3 15.7 1.9 7.3 10.9 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 DUF3108 PF11306.3 gi|407464341|ref|YP_006775223.1| - 0.092 12.3 0.5 0.27 10.8 0.4 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3108) TPR_1 PF00515.23 gi|407464342|ref|YP_006775224.1| - 1.3e-11 43.6 0.2 7.8e-05 22.1 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407464342|ref|YP_006775224.1| - 1.1e-10 40.5 0.1 0.0018 18.0 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407464342|ref|YP_006775224.1| - 2.8e-10 40.3 0.0 1.1e-08 35.2 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407464342|ref|YP_006775224.1| - 2.4e-09 37.0 0.0 0.0013 19.1 0.0 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.1 gi|407464342|ref|YP_006775224.1| - 7.6e-09 35.0 0.0 0.0033 17.0 0.0 2.2 2 0 0 2 2 2 2 TPR repeat TPR_16 PF13432.1 gi|407464342|ref|YP_006775224.1| - 1.9e-07 31.5 0.0 0.0071 16.9 0.0 2.3 1 1 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407464342|ref|YP_006775224.1| - 1.7e-06 27.4 0.0 0.091 12.5 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|407464342|ref|YP_006775224.1| - 3.5e-06 26.4 0.1 0.47 10.3 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407464342|ref|YP_006775224.1| - 6.2e-06 26.0 0.1 0.13 12.4 0.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407464342|ref|YP_006775224.1| - 6.6e-06 25.9 0.0 0.0019 18.0 0.0 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat Apc3 PF12895.2 gi|407464342|ref|YP_006775224.1| - 9.5e-06 25.6 0.0 2.6e-05 24.2 0.0 1.7 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.1 gi|407464342|ref|YP_006775224.1| - 8.5e-05 22.3 0.8 0.0043 16.8 0.2 2.8 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat MIT PF04212.13 gi|407464342|ref|YP_006775224.1| - 0.011 15.5 0.5 0.017 14.9 0.1 1.4 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain TPR_9 PF13371.1 gi|407464342|ref|YP_006775224.1| - 0.019 14.7 0.0 0.03 14.1 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat NARP1 PF12569.3 gi|407464342|ref|YP_006775224.1| - 0.04 12.6 0.1 0.051 12.3 0.0 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|407464342|ref|YP_006775224.1| - 0.08 11.9 0.0 1.3 8.0 0.0 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.1 gi|407464342|ref|YP_006775224.1| - 0.099 13.1 0.0 20 5.9 0.0 3.2 4 0 0 4 4 3 0 Tetratricopeptide repeat HTH_Tnp_Tc5 PF03221.11 gi|407464343|ref|YP_006775225.1| - 0.012 15.4 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain CSTF2_hinge PF14327.1 gi|407464343|ref|YP_006775225.1| - 0.11 12.6 0.1 0.19 11.8 0.1 1.3 1 0 0 1 1 1 0 Hinge domain of cleavage stimulation factor subunit 2 Toxin_64 PF15542.1 gi|407464343|ref|YP_006775225.1| - 0.13 12.8 0.3 14 6.2 0.0 2.2 1 1 1 2 2 2 0 Putative toxin 64 Glyco_transf_90 PF05686.7 gi|407464344|ref|YP_006775226.1| - 0.048 12.3 0.1 0.062 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 90 Beta_propel PF09826.4 gi|407464345|ref|YP_006775227.1| - 4.7e-170 566.3 12.5 5.5e-170 566.1 8.6 1.0 1 0 0 1 1 1 1 Beta propeller domain LVIVD PF08309.6 gi|407464345|ref|YP_006775227.1| - 0.059 12.3 2.8 11 5.0 0.0 3.4 3 0 0 3 3 3 0 LVIVD repeat HTH_20 PF12840.2 gi|407464346|ref|YP_006775228.1| - 2.9e-08 33.4 0.0 4.6e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|407464346|ref|YP_006775228.1| - 7.5e-08 31.9 0.2 1.6e-07 30.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|407464346|ref|YP_006775228.1| - 5e-07 28.9 0.5 9.5e-07 28.1 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TFIIE_alpha PF02002.12 gi|407464346|ref|YP_006775228.1| - 0.00014 21.2 0.3 0.00023 20.6 0.2 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit TrmB PF01978.14 gi|407464346|ref|YP_006775228.1| - 0.00017 21.1 0.1 0.00033 20.2 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Sigma70_r4 PF04545.11 gi|407464346|ref|YP_006775228.1| - 0.00023 20.4 0.0 0.00043 19.5 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_11 PF08279.7 gi|407464346|ref|YP_006775228.1| - 0.00036 20.0 1.3 0.00075 19.1 0.9 1.5 1 0 0 1 1 1 1 HTH domain Sigma70_r4_2 PF08281.7 gi|407464346|ref|YP_006775228.1| - 0.0019 17.5 0.1 0.0043 16.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_9 PF08221.6 gi|407464346|ref|YP_006775228.1| - 0.0035 17.1 0.1 0.0096 15.7 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_34 PF13601.1 gi|407464346|ref|YP_006775228.1| - 0.007 16.3 0.4 0.034 14.1 0.6 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|407464346|ref|YP_006775228.1| - 0.018 14.7 0.0 0.031 13.9 0.0 1.3 1 0 0 1 1 1 0 MarR family Trp_repressor PF01371.14 gi|407464346|ref|YP_006775228.1| - 0.033 14.1 1.5 0.16 11.8 0.4 2.6 3 1 0 3 3 3 0 Trp repressor protein HTH_40 PF14493.1 gi|407464346|ref|YP_006775228.1| - 0.036 14.2 0.4 0.12 12.6 0.2 1.9 2 0 0 2 2 1 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|407464346|ref|YP_006775228.1| - 0.046 13.8 0.2 0.094 12.8 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_45 PF14947.1 gi|407464346|ref|YP_006775228.1| - 0.089 12.6 1.2 0.18 11.6 0.8 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_28 PF13518.1 gi|407464346|ref|YP_006775228.1| - 0.094 12.7 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.7 gi|407464346|ref|YP_006775228.1| - 0.1 12.7 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein DUF385 PF04075.9 gi|407464347|ref|YP_006775229.1| - 1e-06 28.7 0.0 1.2e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF385) DUF2577 PF10844.3 gi|407464347|ref|YP_006775229.1| - 0.028 14.4 0.2 0.041 13.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2577) DUF2255 PF10012.4 gi|407464347|ref|YP_006775229.1| - 0.061 13.2 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2255) PRC PF05239.11 gi|407464348|ref|YP_006775230.1| - 8.3e-08 31.9 0.9 0.00051 19.8 0.1 2.3 2 0 0 2 2 2 2 PRC-barrel domain ABC_tran PF00005.22 gi|407464349|ref|YP_006775231.1| - 2.6e-32 112.0 0.1 5.7e-32 110.8 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|407464349|ref|YP_006775231.1| - 5e-13 49.6 4.5 1.8e-11 44.5 0.5 2.9 2 1 0 2 2 2 1 AAA domain DUF4162 PF13732.1 gi|407464349|ref|YP_006775231.1| - 9e-06 26.1 0.9 2e-05 24.9 0.6 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_15 PF13175.1 gi|407464349|ref|YP_006775231.1| - 8e-05 21.8 0.0 8e-05 21.8 0.0 3.0 3 0 0 3 3 3 1 AAA ATPase domain AAA_29 PF13555.1 gi|407464349|ref|YP_006775231.1| - 0.00066 19.1 0.1 0.0013 18.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.14 gi|407464349|ref|YP_006775231.1| - 0.0039 16.4 0.2 0.01 15.0 0.1 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Rad17 PF03215.10 gi|407464349|ref|YP_006775231.1| - 0.027 13.1 0.0 0.036 12.7 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_23 PF13476.1 gi|407464349|ref|YP_006775231.1| - 0.032 14.5 12.3 0.68 10.2 8.5 2.8 1 1 0 1 1 1 0 AAA domain DUF258 PF03193.11 gi|407464349|ref|YP_006775231.1| - 0.098 11.8 0.1 0.17 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 MMR_HSR1 PF01926.18 gi|407464349|ref|YP_006775231.1| - 0.43 10.5 2.6 13 5.7 1.8 2.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase ABC2_membrane PF01061.19 gi|407464350|ref|YP_006775232.1| - 7.2e-35 120.0 18.9 7.2e-35 120.0 13.1 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|407464350|ref|YP_006775232.1| - 5.1e-19 68.5 32.4 6.4e-19 68.1 22.4 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|407464350|ref|YP_006775232.1| - 6.6e-10 38.5 25.2 8.7e-10 38.1 17.5 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|407464350|ref|YP_006775232.1| - 2.7e-07 29.7 24.7 5.6e-07 28.7 17.2 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein DUF1616 PF07760.6 gi|407464350|ref|YP_006775232.1| - 0.22 10.6 12.2 1.4 7.9 8.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1616) ABC2_membrane_5 PF13346.1 gi|407464350|ref|YP_006775232.1| - 2.1 7.5 25.8 11 5.2 17.9 2.1 1 1 0 1 1 1 0 ABC-2 family transporter protein NHL PF01436.16 gi|407464351|ref|YP_006775233.1| - 1.1e-40 135.4 8.7 8.3e-09 34.9 0.0 6.7 6 0 0 6 6 6 6 NHL repeat HemolysinCabind PF00353.14 gi|407464351|ref|YP_006775233.1| - 2.6e-09 36.5 47.6 0.00012 22.1 3.3 6.5 4 1 6 10 10 10 5 Hemolysin-type calcium-binding repeat (2 copies) SGL PF08450.7 gi|407464351|ref|YP_006775233.1| - 3.1e-08 33.3 0.3 0.00068 19.0 0.1 3.9 1 1 4 5 5 5 2 SMP-30/Gluconolaconase/LRE-like region HYR PF02494.11 gi|407464351|ref|YP_006775233.1| - 0.00012 21.9 0.1 0.0032 17.4 0.1 2.5 2 0 0 2 2 2 1 HYR domain SBBP PF06739.6 gi|407464351|ref|YP_006775233.1| - 0.18 11.6 11.8 0.55 10.0 0.3 4.2 5 0 0 5 5 5 0 Beta-propeller repeat PhoU_div PF01865.11 gi|407464353|ref|YP_006775235.1| - 1.2e-25 90.0 13.8 1.4e-25 89.7 9.6 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.14 gi|407464353|ref|YP_006775235.1| - 0.00011 22.5 13.0 0.04 14.3 3.3 2.4 2 0 0 2 2 2 2 PhoU domain Med21 PF11221.3 gi|407464353|ref|YP_006775235.1| - 0.0088 16.0 1.4 1.1 9.1 0.0 2.8 2 1 0 2 2 2 1 Subunit 21 of Mediator complex DXP_synthase_N PF13292.1 gi|407464353|ref|YP_006775235.1| - 0.041 12.8 0.4 0.16 10.8 0.0 1.9 2 0 0 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase ACCA PF03255.9 gi|407464353|ref|YP_006775235.1| - 0.048 13.2 2.9 0.45 10.0 0.1 2.2 2 0 0 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MCPsignal PF00015.16 gi|407464353|ref|YP_006775235.1| - 0.11 11.9 6.1 0.73 9.3 0.5 2.9 2 2 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF552 PF04472.7 gi|407464353|ref|YP_006775235.1| - 0.16 11.8 5.5 0.83 9.6 0.0 3.6 3 1 1 4 4 4 0 Protein of unknown function (DUF552) ThiF PF00899.16 gi|407464353|ref|YP_006775235.1| - 0.45 10.3 3.7 0.54 10.0 0.1 2.2 1 1 0 2 2 2 0 ThiF family Ferritin PF00210.19 gi|407464353|ref|YP_006775235.1| - 0.55 9.9 7.6 0.21 11.3 0.7 2.5 2 1 0 2 2 2 0 Ferritin-like domain Med4 PF10018.4 gi|407464353|ref|YP_006775235.1| - 3.2 7.1 6.2 0.26 10.6 0.4 1.8 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 PHO4 PF01384.15 gi|407464354|ref|YP_006775236.1| - 6.3e-92 307.7 32.0 7.6e-92 307.4 22.2 1.1 1 0 0 1 1 1 1 Phosphate transporter family DUF897 PF05982.7 gi|407464355|ref|YP_006775237.1| - 7.7e-92 307.5 23.7 9.1e-92 307.3 16.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF897) SseC PF04888.7 gi|407464355|ref|YP_006775237.1| - 0.07 12.4 2.1 0.12 11.6 1.5 1.4 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family P-II PF00543.17 gi|407464356|ref|YP_006775238.1| - 4.4e-05 23.8 0.3 6.2e-05 23.4 0.2 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF3240 PF11582.3 gi|407464356|ref|YP_006775238.1| - 0.00019 21.2 0.1 0.00063 19.6 0.1 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3240) Rad1 PF02144.11 gi|407464356|ref|YP_006775238.1| - 0.11 11.2 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Repair protein Rad1/Rec1/Rad17 HTH_5 PF01022.15 gi|407464357|ref|YP_006775239.1| - 1.3e-17 63.1 0.5 2.3e-17 62.3 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|407464357|ref|YP_006775239.1| - 5.8e-10 38.8 0.0 8.5e-10 38.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|407464357|ref|YP_006775239.1| - 1.4e-09 37.1 0.4 6e-09 35.1 0.1 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|407464357|ref|YP_006775239.1| - 8e-06 25.8 0.2 1e-05 25.4 0.2 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.17 gi|407464357|ref|YP_006775239.1| - 2.4e-05 23.9 0.0 5.3e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|407464357|ref|YP_006775239.1| - 2.8e-05 23.7 0.0 3.8e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|407464357|ref|YP_006775239.1| - 0.001 18.5 0.3 0.0014 18.1 0.2 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit Penicillinase_R PF03965.11 gi|407464357|ref|YP_006775239.1| - 0.0016 18.5 0.3 0.0021 18.1 0.2 1.2 1 0 0 1 1 1 1 Penicillinase repressor HTH_IclR PF09339.5 gi|407464357|ref|YP_006775239.1| - 0.0064 16.0 0.0 0.014 15.0 0.0 1.5 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|407464357|ref|YP_006775239.1| - 0.0084 15.7 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.15 gi|407464357|ref|YP_006775239.1| - 0.018 15.1 0.0 0.023 14.7 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator Arg_repressor PF01316.16 gi|407464357|ref|YP_006775239.1| - 0.026 14.0 0.5 0.065 12.7 0.3 1.7 1 1 0 1 1 1 0 Arginine repressor, DNA binding domain HTH_11 PF08279.7 gi|407464357|ref|YP_006775239.1| - 0.048 13.3 0.1 0.18 11.5 0.0 1.9 2 0 0 2 2 2 0 HTH domain FUR PF01475.14 gi|407464357|ref|YP_006775239.1| - 0.049 13.5 0.2 0.066 13.1 0.1 1.2 1 0 0 1 1 1 0 Ferric uptake regulator family TBPIP PF07106.8 gi|407464357|ref|YP_006775239.1| - 0.054 13.0 0.5 0.063 12.8 0.3 1.1 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) DUF2551 PF10826.3 gi|407464357|ref|YP_006775239.1| - 0.066 13.1 0.2 0.19 11.6 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2551) Cdc6_C PF09079.6 gi|407464357|ref|YP_006775239.1| - 0.067 12.9 0.1 0.087 12.5 0.0 1.4 1 0 0 1 1 1 0 CDC6, C terminal DltD_M PF04918.7 gi|407464357|ref|YP_006775239.1| - 0.069 13.3 0.1 0.079 13.1 0.1 1.0 1 0 0 1 1 1 0 DltD central region B-block_TFIIIC PF04182.7 gi|407464357|ref|YP_006775239.1| - 0.073 12.9 0.3 0.13 12.0 0.2 1.6 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC DUF2250 PF10007.4 gi|407464357|ref|YP_006775239.1| - 0.11 12.4 0.2 0.14 12.0 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) FRD2 PF03197.8 gi|407464357|ref|YP_006775239.1| - 0.19 12.2 0.9 1.2 9.7 0.1 2.1 2 0 0 2 2 2 0 Bacteriophage FRD2 protein LMWPc PF01451.16 gi|407464358|ref|YP_006775240.1| - 2.2e-17 63.6 0.0 2.7e-17 63.3 0.0 1.1 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase MIP PF00230.15 gi|407464359|ref|YP_006775241.1| - 2.8e-37 128.3 18.3 3.2e-37 128.1 12.7 1.0 1 0 0 1 1 1 1 Major intrinsic protein DUF2105 PF09878.4 gi|407464359|ref|YP_006775241.1| - 0.76 9.3 8.8 0.24 10.9 4.0 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2105) Porphobil_deam PF01379.15 gi|407464360|ref|YP_006775242.1| - 2.7e-70 235.6 0.1 3.3e-70 235.3 0.1 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.10 gi|407464360|ref|YP_006775242.1| - 1.8e-12 47.1 0.0 5.1e-12 45.7 0.0 1.8 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain TP_methylase PF00590.15 gi|407464361|ref|YP_006775243.1| - 2.9e-49 167.6 0.0 3.3e-49 167.4 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DAGK_cat PF00781.19 gi|407464361|ref|YP_006775243.1| - 0.087 12.2 0.2 0.33 10.3 0.0 2.0 2 1 0 2 2 2 0 Diacylglycerol kinase catalytic domain HEM4 PF02602.10 gi|407464362|ref|YP_006775244.1| - 2e-42 145.0 0.0 2.3e-42 144.8 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD MgtC PF02308.11 gi|407464363|ref|YP_006775245.1| - 6.2e-35 119.9 9.2 7.9e-35 119.6 6.4 1.1 1 0 0 1 1 1 1 MgtC family DUF1624 PF07786.7 gi|407464363|ref|YP_006775245.1| - 0.85 8.9 7.4 1.5 8.0 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1624) UPF0051 PF01458.12 gi|407464364|ref|YP_006775246.1| - 3.2e-69 232.9 0.1 4.2e-69 232.4 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) UPF0051 PF01458.12 gi|407464365|ref|YP_006775247.1| - 1.9e-67 227.1 1.9 2.5e-67 226.7 1.3 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) NMT1 PF09084.6 gi|407464365|ref|YP_006775247.1| - 0.052 13.1 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 NMT1/THI5 like Rieske PF00355.21 gi|407464366|ref|YP_006775248.1| - 1.6e-17 62.8 0.0 1.8e-17 62.6 0.0 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 gi|407464366|ref|YP_006775248.1| - 1.8e-11 43.6 0.0 2e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Aminotran_5 PF00266.14 gi|407464367|ref|YP_006775249.1| - 1e-149 498.3 0.6 1.1e-149 498.1 0.4 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|407464367|ref|YP_006775249.1| - 3.1e-05 23.0 0.1 0.0002 20.4 0.1 1.9 2 0 0 2 2 2 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|407464367|ref|YP_006775249.1| - 0.00059 18.2 0.1 0.0013 17.1 0.1 1.6 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme DUF4582 PF15189.1 gi|407464367|ref|YP_006775249.1| - 0.0045 16.2 1.3 0.24 10.5 0.2 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4582) NifU_N PF01592.11 gi|407464368|ref|YP_006775250.1| - 2.3e-30 105.1 0.1 2.7e-30 104.9 0.1 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain PGK PF00162.14 gi|407464370|ref|YP_006775252.1| - 4.2e-99 331.7 0.1 4.7e-99 331.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF218 PF02698.12 gi|407464370|ref|YP_006775252.1| - 0.03 13.7 0.2 0.76 9.2 0.0 2.3 2 0 0 2 2 2 0 DUF218 domain PAP2 PF01569.16 gi|407464371|ref|YP_006775253.1| - 9.3e-21 73.8 1.0 9.3e-21 73.8 0.7 2.0 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.1 gi|407464371|ref|YP_006775253.1| - 3.4e-06 26.7 5.7 3.7e-05 23.3 1.8 2.8 1 1 1 2 2 2 1 PAP2 superfamily PAP2_C PF14360.1 gi|407464371|ref|YP_006775253.1| - 0.00014 22.0 6.6 0.00018 21.7 0.1 3.0 3 0 0 3 3 3 1 PAP2 superfamily C-terminal Wzy_C PF04932.10 gi|407464371|ref|YP_006775253.1| - 9.3 6.0 11.4 5.6 6.7 3.7 2.8 1 1 1 2 2 2 0 O-Antigen ligase CAP_assoc_N PF14504.1 gi|407464372|ref|YP_006775254.1| - 0.02 14.5 0.1 0.031 13.9 0.1 1.3 1 0 0 1 1 1 0 CAP-associated N-terminal GreA_GreB PF01272.14 gi|407464372|ref|YP_006775254.1| - 0.12 12.1 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Transcription elongation factor, GreA/GreB, C-term Phage_GPO PF05929.6 gi|407464373|ref|YP_006775255.1| - 0.0083 15.4 4.2 0.0083 15.4 2.9 3.1 1 1 2 3 3 3 1 Phage capsid scaffolding protein (GPO) serine peptidase Baculo_PEP_C PF04513.7 gi|407464373|ref|YP_006775255.1| - 0.0085 15.9 2.4 0.0085 15.9 1.7 2.9 1 1 1 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus Flavi_capsid PF01003.14 gi|407464373|ref|YP_006775255.1| - 0.027 14.0 0.1 0.027 14.0 0.1 2.9 4 1 0 4 4 4 0 Flavivirus capsid protein C DUF1890 PF09001.6 gi|407464373|ref|YP_006775255.1| - 0.3 11.0 3.4 0.88 9.5 0.2 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF1890) KNOX2 PF03791.8 gi|407464373|ref|YP_006775255.1| - 0.34 10.1 2.9 3.1 7.1 0.6 2.6 2 0 0 2 2 2 0 KNOX2 domain Nbl1_Borealin_N PF10444.4 gi|407464373|ref|YP_006775255.1| - 0.35 10.2 4.9 6.7 6.1 0.4 2.9 2 0 0 2 2 2 0 Nbl1 / Borealin N terminal DUF3584 PF12128.3 gi|407464373|ref|YP_006775255.1| - 0.75 7.0 37.5 0.8 6.9 11.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) IncA PF04156.9 gi|407464373|ref|YP_006775255.1| - 1.6 8.2 45.0 9.6 5.7 13.1 3.1 1 1 2 3 3 3 0 IncA protein DUF2721 PF11026.3 gi|407464373|ref|YP_006775255.1| - 4.2 7.0 4.5 1.8 8.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) DUF872 PF05915.7 gi|407464374|ref|YP_006775256.1| - 0.0083 15.9 0.6 2.4 8.0 0.0 2.2 2 0 0 2 2 2 2 Eukaryotic protein of unknown function (DUF872) MFS_Mycoplasma PF07672.8 gi|407464374|ref|YP_006775256.1| - 0.07 12.2 0.2 0.07 12.2 0.2 2.0 2 1 1 3 3 3 0 Mycoplasma MFS transporter DUF4097 PF13349.1 gi|407464374|ref|YP_006775256.1| - 0.54 9.7 4.6 8.4 5.9 0.1 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4097) DUF1700 PF08006.6 gi|407464374|ref|YP_006775256.1| - 0.72 9.1 6.1 4.4 6.5 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) DUF2516 PF10724.4 gi|407464374|ref|YP_006775256.1| - 1.3 9.0 5.7 0.39 10.7 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2516) NfeD PF01957.13 gi|407464374|ref|YP_006775256.1| - 2.4 8.3 6.5 2 8.5 1.2 2.2 2 0 0 2 2 2 0 NfeD-like C-terminal, partner-binding DUF973 PF06157.6 gi|407464374|ref|YP_006775256.1| - 8.6 5.2 12.5 4.2 6.2 4.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF973) PK_C PF02887.11 gi|407464375|ref|YP_006775257.1| - 0.076 12.5 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain SNARE_assoc PF09335.6 gi|407464376|ref|YP_006775258.1| - 0.00061 19.9 8.0 0.00092 19.4 5.1 1.7 1 1 0 1 1 1 1 SNARE associated Golgi protein HD PF01966.17 gi|407464377|ref|YP_006775259.1| - 3.4e-19 69.0 0.5 5.1e-19 68.4 0.3 1.3 1 0 0 1 1 1 1 HD domain HDOD PF08668.7 gi|407464377|ref|YP_006775259.1| - 0.079 12.2 0.1 0.17 11.1 0.1 1.6 1 1 0 1 1 1 0 HDOD domain AAA_11 PF13086.1 gi|407464377|ref|YP_006775259.1| - 0.81 9.2 5.1 0.32 10.5 2.1 1.3 2 0 0 2 2 2 0 AAA domain JmjN PF02375.12 gi|407464378|ref|YP_006775260.1| - 0.19 11.2 2.1 6.7 6.3 0.1 2.4 1 1 1 2 2 2 0 jmjN domain ALAD PF00490.16 gi|407464379|ref|YP_006775261.1| - 1.9e-137 457.5 1.0 2.1e-137 457.3 0.7 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase DUF2070 PF09843.4 gi|407464379|ref|YP_006775261.1| - 8e-05 22.1 0.1 0.00016 21.2 0.1 1.5 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) GlutR_N PF05201.10 gi|407464380|ref|YP_006775262.1| - 1.4e-41 141.6 0.4 1.4e-41 141.6 0.3 1.8 2 0 0 2 2 2 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.15 gi|407464380|ref|YP_006775262.1| - 2.8e-24 85.7 0.0 8.8e-24 84.1 0.0 1.9 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.15 gi|407464380|ref|YP_006775262.1| - 1.7e-21 76.0 3.1 3.8e-21 74.9 2.1 1.6 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain 2-Hacid_dh_C PF02826.14 gi|407464380|ref|YP_006775262.1| - 0.0036 16.4 0.0 0.0086 15.2 0.0 1.7 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.1 gi|407464380|ref|YP_006775262.1| - 0.0081 16.4 0.0 0.032 14.5 0.0 2.0 1 0 0 1 1 1 1 Putative NAD(P)-binding F420_oxidored PF03807.12 gi|407464380|ref|YP_006775262.1| - 0.0082 16.5 0.0 0.03 14.7 0.0 2.1 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.1 gi|407464380|ref|YP_006775262.1| - 0.019 15.0 0.0 0.04 13.9 0.0 1.6 1 0 0 1 1 1 0 NADH(P)-binding DUF1664 PF07889.7 gi|407464380|ref|YP_006775262.1| - 3 7.6 12.9 6.6 6.5 2.0 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) NAD_binding_7 PF13241.1 gi|407464381|ref|YP_006775263.1| - 1.5e-21 76.5 3.1 1.9e-21 76.2 0.3 2.0 2 0 0 2 2 2 1 Putative NAD(P)-binding IlvN PF07991.7 gi|407464381|ref|YP_006775263.1| - 0.0019 17.5 1.1 0.0034 16.7 0.8 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain TrkA_N PF02254.13 gi|407464381|ref|YP_006775263.1| - 0.0051 16.8 0.1 0.0096 15.9 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain Shikimate_DH PF01488.15 gi|407464381|ref|YP_006775263.1| - 0.0054 16.8 0.2 0.0054 16.8 0.1 1.9 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase DUF1524 PF07510.6 gi|407464381|ref|YP_006775263.1| - 0.008 16.0 4.8 0.12 12.1 3.2 2.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1524) Oxidored_nitro PF00148.14 gi|407464381|ref|YP_006775263.1| - 0.012 14.2 0.0 0.021 13.5 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Sirohm_synth_M PF14824.1 gi|407464381|ref|YP_006775263.1| - 0.019 13.9 0.1 0.053 12.5 0.0 1.8 1 0 0 1 1 1 0 Sirohaem biosynthesis protein central SKI PF01202.17 gi|407464381|ref|YP_006775263.1| - 0.031 14.1 2.2 0.069 13.0 0.1 2.1 2 0 0 2 2 2 0 Shikimate kinase ELFV_dehydrog PF00208.16 gi|407464381|ref|YP_006775263.1| - 0.033 13.7 0.3 0.073 12.6 0.2 1.7 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase P22_AR_C PF10548.4 gi|407464381|ref|YP_006775263.1| - 0.033 14.0 0.1 0.067 13.0 0.1 1.5 1 0 0 1 1 1 0 P22AR C-terminal domain XdhC_C PF13478.1 gi|407464381|ref|YP_006775263.1| - 0.04 14.2 0.0 0.093 13.0 0.0 1.6 1 0 0 1 1 1 0 XdhC Rossmann domain F420_oxidored PF03807.12 gi|407464381|ref|YP_006775263.1| - 0.056 13.8 0.9 0.21 12.0 0.7 2.1 1 1 1 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent ATP-synt_F PF01990.12 gi|407464381|ref|YP_006775263.1| - 0.83 10.0 7.3 0.2 12.0 0.8 2.5 3 0 0 3 3 2 0 ATP synthase (F/14-kDa) subunit Mit_KHE1 PF10173.4 gi|407464381|ref|YP_006775263.1| - 4 7.2 6.9 9.7 5.9 4.8 1.8 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related HTH_AsnC-type PF13404.1 gi|407464382|ref|YP_006775264.1| - 7e-05 22.2 0.0 0.029 13.9 0.0 2.5 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain NAGidase PF07555.8 gi|407464382|ref|YP_006775264.1| - 0.0049 15.8 0.3 0.55 9.0 0.1 2.6 1 1 1 2 2 2 2 beta-N-acetylglucosaminidase DUF2316 PF10078.4 gi|407464382|ref|YP_006775264.1| - 0.032 14.2 0.0 4.7 7.2 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2316) AsnC_trans_reg PF01037.16 gi|407464382|ref|YP_006775264.1| - 0.068 12.8 0.0 8 6.2 0.0 2.9 2 1 0 2 2 2 0 AsnC family zf-B_box PF00643.19 gi|407464383|ref|YP_006775265.1| - 0.004 16.9 3.9 0.0066 16.3 2.7 1.3 1 0 0 1 1 1 1 B-box zinc finger Glyco_hydro_1 PF00232.13 gi|407464383|ref|YP_006775265.1| - 0.038 12.2 0.0 0.048 11.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 1 TerY-C PF15616.1 gi|407464383|ref|YP_006775265.1| - 0.044 13.7 0.7 0.055 13.3 0.5 1.2 1 0 0 1 1 1 0 TerY-C metal binding domain Ribosomal_S17 PF00366.15 gi|407464383|ref|YP_006775265.1| - 0.25 11.3 1.3 0.34 10.9 0.5 1.5 1 1 0 1 1 1 0 Ribosomal protein S17 DUF1033 PF06279.6 gi|407464383|ref|YP_006775265.1| - 0.33 10.7 4.5 0.48 10.2 3.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1033) Aldo_ket_red PF00248.16 gi|407464384|ref|YP_006775266.1| - 6.4e-49 166.2 0.1 7.2e-49 166.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Aminotran_5 PF00266.14 gi|407464384|ref|YP_006775266.1| - 0.15 10.7 0.0 0.64 8.6 0.0 1.8 2 0 0 2 2 2 0 Aminotransferase class-V Chlor_dismutase PF06778.7 gi|407464385|ref|YP_006775267.1| - 2.1e-51 174.3 0.6 2.6e-51 174.0 0.4 1.1 1 0 0 1 1 1 1 Chlorite dismutase AsnC_trans_reg PF01037.16 gi|407464385|ref|YP_006775267.1| - 0.16 11.6 1.8 16 5.3 0.0 2.5 2 1 0 2 2 2 0 AsnC family DUF167 PF02594.11 gi|407464386|ref|YP_006775268.1| - 7.3e-15 54.6 3.6 8e-15 54.5 2.5 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 MinE PF03776.9 gi|407464386|ref|YP_006775268.1| - 0.022 14.2 1.5 0.15 11.5 0.3 2.0 1 1 1 2 2 2 0 Septum formation topological specificity factor MinE NPHI_C PF08469.5 gi|407464386|ref|YP_006775268.1| - 0.07 13.0 1.0 0.085 12.7 0.7 1.0 1 0 0 1 1 1 0 Nucleoside triphosphatase I C-terminal ABC_tran PF00005.22 gi|407464387|ref|YP_006775269.1| - 2.9e-20 72.9 0.0 4.4e-20 72.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|407464387|ref|YP_006775269.1| - 2.8e-11 43.9 0.2 8.7e-10 39.0 0.2 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|407464387|ref|YP_006775269.1| - 1.2e-10 41.0 0.6 9.1e-06 25.0 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_25 PF13481.1 gi|407464387|ref|YP_006775269.1| - 4.6e-05 22.9 0.6 0.00054 19.4 0.4 2.2 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|407464387|ref|YP_006775269.1| - 0.00033 20.5 0.0 0.00053 19.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|407464387|ref|YP_006775269.1| - 0.00075 18.9 0.7 0.0013 18.2 0.0 1.7 2 0 0 2 2 1 1 P-loop containing region of AAA domain AAA_13 PF13166.1 gi|407464387|ref|YP_006775269.1| - 0.0015 17.1 1.1 0.11 10.9 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|407464387|ref|YP_006775269.1| - 0.0019 18.2 0.1 0.0066 16.4 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.1 gi|407464387|ref|YP_006775269.1| - 0.0023 17.8 0.2 0.025 14.4 0.1 2.4 1 1 0 1 1 1 1 AAA domain MutS_V PF00488.16 gi|407464387|ref|YP_006775269.1| - 0.0036 16.7 0.1 1.5 8.1 0.0 2.1 2 0 0 2 2 2 2 MutS domain V AAA_23 PF13476.1 gi|407464387|ref|YP_006775269.1| - 0.0057 17.0 1.0 0.021 15.1 0.2 2.0 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|407464387|ref|YP_006775269.1| - 0.013 15.8 2.1 1.3 9.3 1.5 2.4 1 1 0 1 1 1 0 AAA domain Arch_ATPase PF01637.13 gi|407464387|ref|YP_006775269.1| - 0.013 15.1 1.3 0.22 11.2 0.1 2.2 1 1 1 2 2 2 0 Archaeal ATPase AAA_17 PF13207.1 gi|407464387|ref|YP_006775269.1| - 0.021 15.6 0.4 0.057 14.2 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.1 gi|407464387|ref|YP_006775269.1| - 0.027 13.5 0.3 2.5 7.0 0.0 2.3 1 1 0 2 2 2 0 AAA ATPase domain ArgK PF03308.11 gi|407464387|ref|YP_006775269.1| - 0.036 12.8 0.0 0.067 11.9 0.0 1.4 1 0 0 1 1 1 0 ArgK protein DUF258 PF03193.11 gi|407464387|ref|YP_006775269.1| - 0.041 13.0 0.0 0.083 12.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA PF00004.24 gi|407464387|ref|YP_006775269.1| - 0.041 14.0 0.7 1.3 9.2 0.5 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|407464387|ref|YP_006775269.1| - 0.046 13.8 0.1 0.13 12.4 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|407464387|ref|YP_006775269.1| - 0.056 13.4 0.0 0.35 10.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.12 gi|407464387|ref|YP_006775269.1| - 0.067 12.9 0.1 4.7 6.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF87 RNA_helicase PF00910.17 gi|407464387|ref|YP_006775269.1| - 0.11 12.6 0.0 0.36 11.0 0.0 1.8 2 0 0 2 2 2 0 RNA helicase KaiC PF06745.8 gi|407464387|ref|YP_006775269.1| - 0.15 11.1 0.3 15 4.6 0.0 2.3 2 1 0 2 2 2 0 KaiC TFIIB PF00382.14 gi|407464388|ref|YP_006775270.1| - 6.7e-25 86.7 2.2 7.6e-12 44.8 0.1 2.5 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|407464388|ref|YP_006775270.1| - 5.3e-11 41.6 2.5 5.3e-11 41.6 1.7 1.8 2 0 0 2 2 2 1 TFIIB zinc-binding RPA_interact_C PF14768.1 gi|407464388|ref|YP_006775270.1| - 0.025 14.9 1.7 1.4 9.3 0.0 2.7 2 1 0 2 2 2 0 Replication protein A interacting C-terminal Cys_knot PF00007.17 gi|407464388|ref|YP_006775270.1| - 0.06 13.4 1.0 0.06 13.4 0.7 2.2 2 0 0 2 2 2 0 Cystine-knot domain zinc-ribbons_6 PF07191.7 gi|407464388|ref|YP_006775270.1| - 0.067 12.9 2.6 0.23 11.2 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbons OrfB_Zn_ribbon PF07282.6 gi|407464388|ref|YP_006775270.1| - 0.11 12.1 2.0 0.16 11.6 0.4 2.0 2 0 0 2 2 2 0 Putative transposase DNA-binding domain DZR PF12773.2 gi|407464388|ref|YP_006775270.1| - 0.21 11.4 3.8 0.21 11.4 0.2 2.3 2 0 0 2 2 2 0 Double zinc ribbon Auto_anti-p27 PF06677.7 gi|407464388|ref|YP_006775270.1| - 1.7 8.4 6.1 0.24 11.1 1.0 2.0 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Spt4 PF06093.8 gi|407464388|ref|YP_006775270.1| - 7.3 6.5 9.6 2.6 8.0 1.0 3.3 3 2 0 3 3 3 0 Spt4/RpoE2 zinc finger Gar1 PF04410.9 gi|407464389|ref|YP_006775271.1| - 3.2e-07 29.9 0.0 3.6e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region SRP19 PF01922.12 gi|407464390|ref|YP_006775272.1| - 1.2e-16 61.0 0.0 1.3e-16 60.8 0.0 1.0 1 0 0 1 1 1 1 SRP19 protein Ku PF02735.11 gi|407464390|ref|YP_006775272.1| - 0.025 13.9 0.1 0.028 13.8 0.0 1.0 1 0 0 1 1 1 0 Ku70/Ku80 beta-barrel domain Streptin-Immun PF11083.3 gi|407464390|ref|YP_006775272.1| - 0.1 12.6 0.1 12 5.9 0.0 2.3 2 0 0 2 2 2 0 Lantibiotic streptin immunity protein Ribosomal_S8e PF01201.17 gi|407464391|ref|YP_006775273.1| - 5.6e-23 81.5 5.5 6.1e-23 81.4 3.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e DUF387 PF04079.11 gi|407464392|ref|YP_006775274.1| - 7.2e-35 119.7 0.6 8.5e-35 119.4 0.4 1.0 1 0 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) HHH_3 PF12836.2 gi|407464392|ref|YP_006775274.1| - 0.03 14.2 0.0 0.079 12.9 0.0 1.7 1 1 0 1 1 1 0 Helix-hairpin-helix motif HTH_20 PF12840.2 gi|407464392|ref|YP_006775274.1| - 0.065 13.0 0.1 0.18 11.6 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain FBP PF07299.6 gi|407464392|ref|YP_006775274.1| - 0.072 12.4 0.3 0.31 10.3 0.0 2.0 2 1 0 2 2 2 0 Fibronectin-binding protein (FBP) ScpA_ScpB PF02616.9 gi|407464393|ref|YP_006775275.1| - 1.9e-13 50.5 2.7 1.1e-06 28.4 0.6 2.1 1 1 0 2 2 2 2 ScpA/B protein ADH_N PF08240.7 gi|407464394|ref|YP_006775276.1| - 3.1e-35 120.2 0.9 5e-35 119.5 0.6 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|407464394|ref|YP_006775276.1| - 9.6e-31 106.0 0.1 1.5e-30 105.4 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 gi|407464394|ref|YP_006775276.1| - 9.2e-11 42.7 0.0 1.5e-10 42.0 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DapB_N PF01113.15 gi|407464394|ref|YP_006775276.1| - 0.013 15.4 0.4 0.026 14.4 0.3 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus 3HCDH_N PF02737.13 gi|407464394|ref|YP_006775276.1| - 0.038 13.6 0.1 0.059 13.0 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Response_reg PF00072.19 gi|407464395|ref|YP_006775277.1| - 8.1e-16 58.0 0.1 1.5e-15 57.1 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Apc3 PF12895.2 gi|407464395|ref|YP_006775277.1| - 0.0001 22.3 5.0 0.0032 17.5 1.6 2.5 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.1 gi|407464395|ref|YP_006775277.1| - 0.00045 19.7 0.2 0.0019 17.8 0.1 2.0 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.23 gi|407464395|ref|YP_006775277.1| - 0.0014 18.1 0.1 0.01 15.3 0.1 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407464395|ref|YP_006775277.1| - 0.0028 17.4 0.1 0.025 14.4 0.0 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407464395|ref|YP_006775277.1| - 0.0033 17.3 0.1 0.2 11.6 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat PK_C PF02887.11 gi|407464395|ref|YP_006775277.1| - 0.061 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain TPR_11 PF13414.1 gi|407464395|ref|YP_006775277.1| - 0.075 12.6 0.8 0.51 10.0 0.3 2.3 1 1 1 2 2 2 0 TPR repeat HTH_AsnC-type PF13404.1 gi|407464396|ref|YP_006775278.1| - 8.2e-10 38.0 1.1 1.6e-08 33.9 0.6 2.9 2 1 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|407464396|ref|YP_006775278.1| - 1.8e-09 36.8 1.5 1.8e-09 36.8 1.0 2.4 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_12 PF08461.5 gi|407464396|ref|YP_006775278.1| - 1.5e-07 31.0 1.2 2.2e-07 30.5 0.3 1.7 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain HTH_11 PF08279.7 gi|407464396|ref|YP_006775278.1| - 2.3e-06 27.1 0.8 1.4e-05 24.6 0.4 2.3 1 1 0 1 1 1 1 HTH domain HTH_Tnp_Tc3_2 PF01498.13 gi|407464396|ref|YP_006775278.1| - 3.3e-05 23.8 0.8 9e-05 22.4 0.1 2.0 3 0 0 3 3 2 1 Transposase Penicillinase_R PF03965.11 gi|407464396|ref|YP_006775278.1| - 0.00012 22.1 0.2 0.00062 19.8 0.0 2.0 2 0 0 2 2 2 1 Penicillinase repressor HTH_20 PF12840.2 gi|407464396|ref|YP_006775278.1| - 0.00015 21.4 0.0 0.00023 20.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_DeoR PF08220.7 gi|407464396|ref|YP_006775278.1| - 0.0017 17.8 0.1 0.0055 16.2 0.1 1.9 1 1 0 1 1 1 1 DeoR-like helix-turn-helix domain Myb_DNA-bind_4 PF13837.1 gi|407464396|ref|YP_006775278.1| - 0.01 15.9 0.2 0.023 14.8 0.0 1.6 2 0 0 2 2 1 0 Myb/SANT-like DNA-binding domain FUR PF01475.14 gi|407464396|ref|YP_006775278.1| - 0.014 15.3 0.3 0.035 14.0 0.0 1.7 2 0 0 2 2 2 0 Ferric uptake regulator family DUF3658 PF12395.3 gi|407464396|ref|YP_006775278.1| - 0.018 14.5 0.2 0.36 10.4 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function Arg_repressor PF01316.16 gi|407464396|ref|YP_006775278.1| - 0.021 14.3 0.2 0.058 12.9 0.1 1.7 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain HxlR PF01638.12 gi|407464396|ref|YP_006775278.1| - 0.022 14.3 0.1 0.76 9.4 0.0 2.3 2 0 0 2 2 2 0 HxlR-like helix-turn-helix HTH_32 PF13565.1 gi|407464396|ref|YP_006775278.1| - 0.031 15.0 0.1 0.083 13.6 0.0 1.7 2 0 0 2 2 1 0 Homeodomain-like domain RPA_C PF08784.6 gi|407464396|ref|YP_006775278.1| - 0.039 14.3 0.0 0.085 13.2 0.0 1.6 1 0 0 1 1 1 0 Replication protein A C terminal DUF3783 PF12646.2 gi|407464396|ref|YP_006775278.1| - 0.044 13.5 0.0 0.15 11.7 0.0 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3783) Sigma70_r4_2 PF08281.7 gi|407464396|ref|YP_006775278.1| - 0.064 12.7 0.1 0.12 11.8 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 DUF2203 PF09969.4 gi|407464396|ref|YP_006775278.1| - 0.067 13.4 0.9 0.21 11.7 0.1 1.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF4358 PF14270.1 gi|407464396|ref|YP_006775278.1| - 0.079 12.8 1.2 0.35 10.7 0.1 2.4 1 1 2 3 3 3 0 Domain of unknown function (DUF4358) COG5 PF10392.4 gi|407464396|ref|YP_006775278.1| - 0.1 12.5 1.8 0.087 12.7 0.3 1.6 2 0 0 2 2 2 0 Golgi transport complex subunit 5 Rrf2 PF02082.15 gi|407464396|ref|YP_006775278.1| - 0.13 12.3 0.1 0.94 9.6 0.0 2.2 2 0 0 2 2 2 0 Transcriptional regulator DUF4423 PF14394.1 gi|407464396|ref|YP_006775278.1| - 0.16 11.5 3.2 5.4 6.5 2.2 2.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) DUF148 PF02520.12 gi|407464396|ref|YP_006775278.1| - 0.25 11.1 3.5 1.1 9.0 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function DUF148 DUF2862 PF11061.3 gi|407464396|ref|YP_006775278.1| - 6 6.6 7.7 1.5 8.5 0.2 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF2862) CxxCxxCC PF03692.10 gi|407464397|ref|YP_006775279.1| - 2e-08 34.5 5.2 2.5e-08 34.2 1.2 2.3 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain Eclosion PF04736.7 gi|407464397|ref|YP_006775279.1| - 0.14 11.5 3.5 5.9 6.4 0.0 2.5 2 0 0 2 2 2 0 Eclosion hormone eIF-1a PF01176.14 gi|407464398|ref|YP_006775280.1| - 3.2e-20 71.3 1.3 4.5e-20 70.8 0.9 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 CSD PF00313.17 gi|407464399|ref|YP_006775281.1| - 1.5e-20 72.7 4.2 1.8e-20 72.4 2.9 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.6 gi|407464399|ref|YP_006775281.1| - 2.2e-06 27.0 1.1 2.3e-06 26.9 0.8 1.1 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF4358 PF14270.1 gi|407464400|ref|YP_006775282.1| - 0.026 14.4 0.5 1.2 9.0 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4358) BCNT PF07572.7 gi|407464400|ref|YP_006775282.1| - 0.089 12.7 0.2 0.2 11.6 0.1 1.6 1 0 0 1 1 1 0 Bucentaur or craniofacial development eIF-5a PF01287.15 gi|407464401|ref|YP_006775283.1| - 4.8e-14 52.0 2.7 6.3e-14 51.6 1.8 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.7 gi|407464401|ref|YP_006775283.1| - 0.00012 21.8 0.1 0.02 14.7 0.0 2.4 2 0 0 2 2 2 2 Elongation factor P (EF-P) KOW-like domain KOW PF00467.24 gi|407464401|ref|YP_006775283.1| - 0.014 15.1 0.3 0.59 9.9 0.0 2.6 2 0 0 2 2 2 0 KOW motif ATP_bind_4 PF01902.12 gi|407464402|ref|YP_006775284.1| - 3.4e-58 196.5 0.0 3.9e-58 196.4 0.0 1.0 1 0 0 1 1 1 1 ATP-binding region Asn_synthase PF00733.16 gi|407464402|ref|YP_006775284.1| - 5.8e-06 25.9 0.0 7.7e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|407464402|ref|YP_006775284.1| - 0.0053 16.0 0.0 0.01 15.1 0.0 1.5 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC SRP54 PF00448.17 gi|407464403|ref|YP_006775285.1| - 1.3e-69 233.6 0.2 2.4e-69 232.7 0.2 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.14 gi|407464403|ref|YP_006775285.1| - 2.8e-29 101.4 3.9 8.3e-29 99.9 0.5 2.8 3 0 0 3 3 2 1 Signal peptide binding domain SRP54_N PF02881.14 gi|407464403|ref|YP_006775285.1| - 2.4e-15 56.3 1.5 2.4e-15 56.3 1.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain CbiA PF01656.18 gi|407464403|ref|YP_006775285.1| - 2.8e-09 36.6 0.4 1.1e-08 34.7 0.2 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArgK PF03308.11 gi|407464403|ref|YP_006775285.1| - 8.3e-06 24.7 0.0 0.00015 20.6 0.0 2.5 2 0 0 2 2 2 1 ArgK protein AAA_17 PF13207.1 gi|407464403|ref|YP_006775285.1| - 1.7e-05 25.5 0.4 0.00013 22.8 0.3 2.4 1 1 0 1 1 1 1 AAA domain cobW PF02492.14 gi|407464403|ref|YP_006775285.1| - 2.5e-05 23.7 0.8 0.0001 21.8 0.6 1.9 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.9 gi|407464403|ref|YP_006775285.1| - 2.8e-05 23.8 0.3 7.7e-05 22.4 0.2 1.7 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_31 PF13614.1 gi|407464403|ref|YP_006775285.1| - 5.8e-05 23.0 0.0 0.006 16.5 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|407464403|ref|YP_006775285.1| - 8.8e-05 22.8 1.9 0.00048 20.4 0.1 2.7 2 2 0 2 2 2 1 AAA domain PduV-EutP PF10662.4 gi|407464403|ref|YP_006775285.1| - 0.00019 20.9 0.7 0.51 9.8 0.0 2.4 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation KTI12 PF08433.5 gi|407464403|ref|YP_006775285.1| - 0.00025 20.3 0.0 0.00063 19.0 0.0 1.6 1 0 0 1 1 1 1 Chromatin associated protein KTI12 APS_kinase PF01583.15 gi|407464403|ref|YP_006775285.1| - 0.00037 20.1 0.4 0.00086 18.9 0.0 1.8 2 0 0 2 2 1 1 Adenylylsulphate kinase AAA_22 PF13401.1 gi|407464403|ref|YP_006775285.1| - 0.0007 19.7 0.2 0.0026 17.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA PF00004.24 gi|407464403|ref|YP_006775285.1| - 0.00086 19.5 0.1 0.0063 16.7 0.0 2.6 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|407464403|ref|YP_006775285.1| - 0.0011 18.9 0.1 0.0038 17.2 0.0 1.9 1 1 1 2 2 2 1 AAA ATPase domain 6PF2K PF01591.13 gi|407464403|ref|YP_006775285.1| - 0.0016 17.5 0.0 0.0031 16.6 0.0 1.4 1 0 0 1 1 1 1 6-phosphofructo-2-kinase Thymidylate_kin PF02223.12 gi|407464403|ref|YP_006775285.1| - 0.0031 16.9 0.2 0.0084 15.4 0.2 1.7 1 0 0 1 1 1 1 Thymidylate kinase Zeta_toxin PF06414.7 gi|407464403|ref|YP_006775285.1| - 0.0037 16.3 0.0 0.0062 15.6 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.1 gi|407464403|ref|YP_006775285.1| - 0.0044 16.9 0.0 0.0078 16.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.10 gi|407464403|ref|YP_006775285.1| - 0.0055 16.4 0.3 0.014 15.1 0.0 1.9 2 0 0 2 2 1 1 NTPase AAA_30 PF13604.1 gi|407464403|ref|YP_006775285.1| - 0.0083 15.7 0.0 0.017 14.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain MipZ PF09140.6 gi|407464403|ref|YP_006775285.1| - 0.0097 15.0 0.3 0.34 9.9 0.2 2.2 1 1 0 1 1 1 1 ATPase MipZ LpxK PF02606.9 gi|407464403|ref|YP_006775285.1| - 0.01 14.7 0.1 0.017 14.0 0.1 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_5 PF07728.9 gi|407464403|ref|YP_006775285.1| - 0.012 15.3 0.1 0.033 13.9 0.1 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.12 gi|407464403|ref|YP_006775285.1| - 0.016 14.7 0.1 0.033 13.7 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein ABC_tran PF00005.22 gi|407464403|ref|YP_006775285.1| - 0.024 14.9 0.2 0.061 13.6 0.0 1.8 2 0 0 2 2 1 0 ABC transporter AAA_10 PF12846.2 gi|407464403|ref|YP_006775285.1| - 0.028 13.8 0.2 0.045 13.1 0.1 1.6 1 1 0 1 1 1 0 AAA-like domain AAA_28 PF13521.1 gi|407464403|ref|YP_006775285.1| - 0.029 14.3 0.1 0.047 13.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain Arf PF00025.16 gi|407464403|ref|YP_006775285.1| - 0.031 13.5 0.0 0.068 12.4 0.0 1.5 1 0 0 1 1 1 0 ADP-ribosylation factor family SpoVIF PF14069.1 gi|407464403|ref|YP_006775285.1| - 0.037 13.7 0.1 0.13 11.9 0.1 2.0 1 0 0 1 1 1 0 Stage VI sporulation protein F AAA_26 PF13500.1 gi|407464403|ref|YP_006775285.1| - 0.044 13.3 0.0 0.55 9.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain SRPRB PF09439.5 gi|407464403|ref|YP_006775285.1| - 0.047 12.8 0.5 0.32 10.1 0.1 2.2 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit EIF_2_alpha PF07541.7 gi|407464403|ref|YP_006775285.1| - 0.052 13.2 0.1 0.45 10.2 0.0 2.3 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 2 alpha subunit LytR_C PF13399.1 gi|407464403|ref|YP_006775285.1| - 0.054 13.8 0.1 0.13 12.6 0.0 1.6 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator AAA_25 PF13481.1 gi|407464403|ref|YP_006775285.1| - 0.055 12.8 0.9 0.25 10.7 0.6 2.1 1 1 0 1 1 1 0 AAA domain Cytidylate_kin2 PF13189.1 gi|407464403|ref|YP_006775285.1| - 0.064 13.1 1.3 8.1 6.3 0.1 3.3 3 1 0 3 3 3 0 Cytidylate kinase-like family Mur_ligase_M PF08245.7 gi|407464403|ref|YP_006775285.1| - 0.071 13.1 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 Mur ligase middle domain VirC1 PF07015.6 gi|407464403|ref|YP_006775285.1| - 0.077 12.0 0.0 0.14 11.2 0.0 1.3 1 0 0 1 1 1 0 VirC1 protein IstB_IS21 PF01695.12 gi|407464403|ref|YP_006775285.1| - 0.099 12.0 0.1 0.29 10.5 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_19 PF13245.1 gi|407464403|ref|YP_006775285.1| - 0.13 12.0 0.2 0.38 10.5 0.2 1.7 1 0 0 1 1 1 0 Part of AAA domain AAA_24 PF13479.1 gi|407464403|ref|YP_006775285.1| - 0.16 11.4 1.1 0.37 10.3 0.3 2.1 2 1 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|407464403|ref|YP_006775285.1| - 0.37 10.4 1.6 0.45 10.1 0.2 1.8 2 0 0 2 2 1 0 NACHT domain THUMP PF02926.12 gi|407464404|ref|YP_006775286.1| - 0.0032 17.3 0.1 0.0097 15.8 0.0 1.8 2 0 0 2 2 2 1 THUMP domain PhoU_div PF01865.11 gi|407464405|ref|YP_006775287.1| - 0.037 13.1 0.6 0.1 11.7 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function DUF47 Ribosomal_S27 PF01599.14 gi|407464406|ref|YP_006775288.1| - 4.6e-20 71.1 3.7 5.6e-20 70.8 2.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a Ribosomal_L37e PF01907.14 gi|407464406|ref|YP_006775288.1| - 0.00017 21.3 4.2 0.00027 20.6 2.9 1.3 1 0 0 1 1 1 1 Ribosomal protein L37e GCC2_GCC3 PF07699.8 gi|407464406|ref|YP_006775288.1| - 0.00025 20.5 1.9 0.00032 20.2 1.3 1.3 1 0 0 1 1 1 1 GCC2 and GCC3 Nudix_N_2 PF14803.1 gi|407464406|ref|YP_006775288.1| - 0.00073 19.1 2.4 0.11 12.1 0.1 2.2 2 0 0 2 2 2 2 Nudix N-terminal DZR PF12773.2 gi|407464406|ref|YP_006775288.1| - 0.0039 16.9 0.6 0.0052 16.5 0.4 1.3 1 0 0 1 1 1 1 Double zinc ribbon A2L_zn_ribbon PF08792.5 gi|407464406|ref|YP_006775288.1| - 0.008 15.6 1.3 0.015 14.7 0.9 1.4 1 0 0 1 1 1 1 A2L zinc ribbon domain OrfB_Zn_ribbon PF07282.6 gi|407464406|ref|YP_006775288.1| - 0.012 15.2 2.2 0.016 14.8 1.5 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.1 gi|407464406|ref|YP_006775288.1| - 0.012 15.0 2.2 0.84 9.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF1451 PF07295.6 gi|407464406|ref|YP_006775288.1| - 0.02 14.7 0.8 0.02 14.6 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) NCD3G PF07562.9 gi|407464406|ref|YP_006775288.1| - 0.021 14.5 1.2 0.027 14.1 0.8 1.2 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR zf-CCHC_5 PF14787.1 gi|407464406|ref|YP_006775288.1| - 0.047 13.1 0.5 0.047 13.1 0.4 2.3 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger zf-NADH-PPase PF09297.6 gi|407464406|ref|YP_006775288.1| - 0.071 12.6 5.1 0.18 11.3 0.4 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain G5 PF07501.7 gi|407464406|ref|YP_006775288.1| - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 G5 domain DUF4608 PF15381.1 gi|407464406|ref|YP_006775288.1| - 0.12 12.5 0.6 0.14 12.3 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4608) zf-ribbon_3 PF13248.1 gi|407464406|ref|YP_006775288.1| - 0.13 11.5 4.6 0.49 9.6 3.1 1.9 1 1 1 2 2 2 0 zinc-ribbon domain GFA PF04828.9 gi|407464406|ref|YP_006775288.1| - 0.18 11.7 3.8 0.2 11.6 0.2 1.9 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-C2H2_3 PF13878.1 gi|407464406|ref|YP_006775288.1| - 0.23 11.0 6.0 2.9 7.5 0.5 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO HypA PF01155.14 gi|407464406|ref|YP_006775288.1| - 0.24 11.0 1.6 0.28 10.8 1.1 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Ribosomal_S24e PF01282.14 gi|407464407|ref|YP_006775289.1| - 0.00065 19.4 0.1 0.0012 18.6 0.1 1.5 1 1 0 1 1 1 1 Ribosomal protein S24e AIF-MLS PF14962.1 gi|407464407|ref|YP_006775289.1| - 0.025 14.2 6.0 0.032 13.8 4.2 1.1 1 0 0 1 1 1 0 Mitochondria Localisation Sequence GXGXG PF01493.14 gi|407464407|ref|YP_006775289.1| - 0.026 13.5 0.0 0.033 13.1 0.0 1.1 1 0 0 1 1 1 0 GXGXG motif DUF309 PF03745.9 gi|407464408|ref|YP_006775290.1| - 9.2e-18 63.4 0.3 1.4e-17 62.8 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF309) PhosphMutase PF10143.4 gi|407464409|ref|YP_006775291.1| - 7.1e-47 159.2 0.0 1.2e-46 158.4 0.0 1.4 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.13 gi|407464409|ref|YP_006775291.1| - 3.7e-31 108.4 1.0 4.9e-31 108.0 0.7 1.2 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.17 gi|407464409|ref|YP_006775291.1| - 0.0011 18.3 0.0 0.002 17.5 0.0 1.4 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase GalP_UDP_transf PF01087.17 gi|407464410|ref|YP_006775292.1| - 1e-08 35.4 0.0 2.3e-08 34.3 0.0 1.6 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, N-terminal domain HIT PF01230.18 gi|407464410|ref|YP_006775292.1| - 1.3e-05 25.6 0.0 0.00029 21.2 0.0 2.3 2 0 0 2 2 2 1 HIT domain GalP_UDP_tr_C PF02744.12 gi|407464410|ref|YP_006775292.1| - 0.00079 18.9 0.0 0.0013 18.2 0.0 1.3 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, C-terminal domain DcpS_C PF11969.3 gi|407464410|ref|YP_006775292.1| - 0.0022 18.1 0.0 0.0067 16.6 0.0 1.8 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding Ral PF11058.3 gi|407464410|ref|YP_006775292.1| - 0.16 11.3 0.7 15 5.0 0.0 2.9 2 1 0 2 2 2 0 Antirestriction protein Ral DUF2162 PF09930.4 gi|407464411|ref|YP_006775293.1| - 0.0017 17.5 0.6 0.0027 16.8 0.4 1.4 1 0 0 1 1 1 1 Predicted transporter (DUF2162) IncFII_repA PF02387.10 gi|407464411|ref|YP_006775293.1| - 0.01 14.9 0.1 0.013 14.6 0.1 1.1 1 0 0 1 1 1 0 IncFII RepA protein family DUF973 PF06157.6 gi|407464411|ref|YP_006775293.1| - 0.014 14.3 4.1 0.019 13.9 2.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF973) YjgP_YjgQ PF03739.9 gi|407464411|ref|YP_006775293.1| - 0.054 12.2 1.1 0.07 11.8 0.8 1.2 1 0 0 1 1 1 0 Predicted permease YjgP/YjgQ family EamA PF00892.15 gi|407464411|ref|YP_006775293.1| - 0.055 13.5 5.2 0.083 12.9 1.4 2.0 2 0 0 2 2 2 0 EamA-like transporter family BDV_G PF06208.6 gi|407464411|ref|YP_006775293.1| - 0.078 11.8 0.1 0.093 11.6 0.1 1.1 1 0 0 1 1 1 0 Borna disease virus G protein MFS_1 PF07690.11 gi|407464411|ref|YP_006775293.1| - 0.1 11.2 7.2 0.18 10.5 5.0 1.5 1 1 0 1 1 1 0 Major Facilitator Superfamily DUF3098 PF11297.3 gi|407464411|ref|YP_006775293.1| - 3.3 7.5 13.0 0.098 12.3 0.5 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3098) Tetraspannin PF00335.15 gi|407464411|ref|YP_006775293.1| - 6.7 5.9 7.8 11 5.1 0.0 2.5 2 1 0 2 2 2 0 Tetraspanin family TM_helix PF05552.7 gi|407464411|ref|YP_006775293.1| - 7.6 6.2 7.8 0.66 9.6 0.5 2.4 2 1 0 2 2 2 0 Conserved TM helix Acetyltransf_1 PF00583.19 gi|407464412|ref|YP_006775294.1| - 8.8e-17 60.9 0.0 1.2e-16 60.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|407464412|ref|YP_006775294.1| - 1.3e-15 57.3 0.0 1.8e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|407464412|ref|YP_006775294.1| - 2.7e-08 33.7 0.0 3.3e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|407464412|ref|YP_006775294.1| - 6.5e-07 29.4 0.0 7.7e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|407464412|ref|YP_006775294.1| - 0.00026 20.9 0.1 0.00036 20.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|407464412|ref|YP_006775294.1| - 0.051 13.4 0.0 0.076 12.9 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_8 PF13523.1 gi|407464412|ref|YP_006775294.1| - 0.16 11.8 0.0 0.62 9.9 0.0 1.9 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain NTP_transferase PF00483.18 gi|407464413|ref|YP_006775295.1| - 7.2e-41 140.1 0.0 8.2e-41 139.9 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|407464413|ref|YP_006775295.1| - 7.5e-09 35.8 0.0 9.1e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|407464413|ref|YP_006775295.1| - 0.014 14.9 0.0 0.032 13.7 0.0 1.6 2 0 0 2 2 2 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Aldolase_2 PF10120.4 gi|407464414|ref|YP_006775296.1| - 3.1e-57 192.6 0.0 5.8e-57 191.7 0.0 1.5 1 0 0 1 1 1 1 Putative aldolase Phos_pyr_kin PF08543.7 gi|407464414|ref|YP_006775296.1| - 5.2e-28 97.8 3.1 6.9e-28 97.4 0.8 1.8 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase PfkB PF00294.19 gi|407464414|ref|YP_006775296.1| - 2.3e-11 43.3 0.0 3.5e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.12 gi|407464414|ref|YP_006775296.1| - 0.056 12.7 0.1 0.093 12.0 0.1 1.4 1 0 0 1 1 1 0 Carbohydrate kinase Phos_pyr_kin PF08543.7 gi|407464415|ref|YP_006775297.1| - 7.2e-28 97.4 0.3 7.9e-28 97.2 0.2 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase DUF1221 PF06760.6 gi|407464416|ref|YP_006775298.1| - 0.0036 16.5 0.0 0.0037 16.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1221) DUF4379 PF14311.1 gi|407464416|ref|YP_006775298.1| - 0.082 12.7 0.6 0.13 12.1 0.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4379) Zn_Tnp_IS1595 PF12760.2 gi|407464416|ref|YP_006775298.1| - 0.085 12.6 1.8 0.15 11.8 1.3 1.5 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|407464416|ref|YP_006775298.1| - 0.14 11.8 0.7 3.4 7.4 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-CSL PF05207.8 gi|407464416|ref|YP_006775298.1| - 0.46 10.0 4.1 0.38 10.3 1.0 1.9 1 1 1 2 2 2 0 CSL zinc finger zf-CW PF07496.10 gi|407464416|ref|YP_006775298.1| - 1.9 8.2 5.5 2.7 7.7 0.3 2.2 1 1 1 2 2 2 0 CW-type Zinc Finger zf-RanBP PF00641.13 gi|407464416|ref|YP_006775298.1| - 9.1 5.4 7.5 6.5 5.9 0.6 2.3 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others SporV_AA PF12164.3 gi|407464417|ref|YP_006775299.1| - 0.0077 16.2 0.5 0.0087 16.0 0.4 1.0 1 0 0 1 1 1 1 Stage V sporulation protein AA DUF2205 PF10224.4 gi|407464417|ref|YP_006775299.1| - 0.021 14.3 2.3 0.46 10.0 0.2 2.4 1 1 1 2 2 2 0 Predicted coiled-coil protein (DUF2205) IFP_35_N PF07334.8 gi|407464417|ref|YP_006775299.1| - 0.44 10.5 2.3 0.48 10.4 0.1 1.8 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus ThiC PF01964.13 gi|407464418|ref|YP_006775300.1| - 3e-176 586.0 1.5 3.4e-176 585.8 1.0 1.0 1 0 0 1 1 1 1 ThiC family NUDIX PF00293.23 gi|407464419|ref|YP_006775301.1| - 1.2e-12 47.6 0.0 1.4e-12 47.4 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.1 gi|407464419|ref|YP_006775301.1| - 1.8e-05 24.0 0.1 3.3e-05 23.2 0.0 1.4 1 1 0 1 1 1 1 NUDIX domain PDH PF02153.12 gi|407464420|ref|YP_006775302.1| - 4.8e-25 87.9 0.1 5.9e-25 87.6 0.1 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.10 gi|407464420|ref|YP_006775302.1| - 4.4e-07 29.8 0.2 1.6e-06 28.0 0.0 1.9 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.13 gi|407464420|ref|YP_006775302.1| - 1.7e-05 24.5 0.2 6.3e-05 22.6 0.0 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|407464420|ref|YP_006775302.1| - 2.2e-05 23.6 0.0 4e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|407464420|ref|YP_006775302.1| - 0.00013 22.3 0.5 0.00071 19.9 0.0 2.5 2 2 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|407464420|ref|YP_006775302.1| - 0.0014 18.3 2.0 1.2 8.8 0.0 3.0 2 2 1 3 3 3 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_10 PF13460.1 gi|407464420|ref|YP_006775302.1| - 0.0017 18.3 0.0 0.0032 17.4 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding ThiF PF00899.16 gi|407464420|ref|YP_006775302.1| - 0.0027 17.5 0.9 1.7 8.4 0.1 3.2 2 2 1 3 3 3 1 ThiF family IlvN PF07991.7 gi|407464420|ref|YP_006775302.1| - 0.0053 16.1 0.1 0.015 14.6 0.0 1.8 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain DapB_N PF01113.15 gi|407464420|ref|YP_006775302.1| - 0.041 13.8 0.1 0.14 12.0 0.0 2.0 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus ApbA PF02558.11 gi|407464420|ref|YP_006775302.1| - 0.043 13.2 0.1 0.36 10.2 0.1 2.2 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Phage-tail_1 PF09097.5 gi|407464420|ref|YP_006775302.1| - 0.046 13.3 0.9 0.12 11.9 0.4 1.7 1 1 1 2 2 2 0 Baseplate structural protein, domain 1 NAD_binding_7 PF13241.1 gi|407464420|ref|YP_006775302.1| - 0.046 13.9 0.2 0.34 11.1 0.0 2.2 2 1 0 2 2 2 0 Putative NAD(P)-binding NmrA PF05368.8 gi|407464420|ref|YP_006775302.1| - 0.051 12.8 1.9 0.093 11.9 0.1 2.4 2 2 0 2 2 2 0 NmrA-like family Ada3 PF10198.4 gi|407464420|ref|YP_006775302.1| - 0.055 13.2 0.2 0.12 12.0 0.1 1.6 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 Ldh_1_N PF00056.18 gi|407464420|ref|YP_006775302.1| - 0.064 13.0 0.1 5.3 6.8 0.0 2.6 2 1 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.9 gi|407464420|ref|YP_006775302.1| - 0.064 13.1 0.1 0.32 10.8 0.1 2.0 1 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF155 PF02582.9 gi|407464420|ref|YP_006775302.1| - 0.2 11.5 3.0 1.6 8.6 0.2 2.4 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Aminotran_1_2 PF00155.16 gi|407464421|ref|YP_006775303.1| - 8.1e-60 202.6 0.0 1e-59 202.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II CM_2 PF01817.16 gi|407464421|ref|YP_006775303.1| - 3.3e-09 36.7 0.7 1.3e-08 34.7 0.5 2.1 1 0 0 1 1 1 1 Chorismate mutase type II Aminotran_5 PF00266.14 gi|407464421|ref|YP_006775303.1| - 3.1e-07 29.4 0.0 4.7e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|407464421|ref|YP_006775303.1| - 3e-06 26.5 0.0 4.7e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.15 gi|407464421|ref|YP_006775303.1| - 3e-06 25.7 0.1 4.5e-06 25.1 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.8 gi|407464421|ref|YP_006775303.1| - 0.00017 20.3 1.6 0.00064 18.4 0.1 2.5 3 0 0 3 3 3 1 Allinase DUF1396 PF07161.8 gi|407464421|ref|YP_006775303.1| - 0.0076 15.9 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1396) Chorismate_synt PF01264.16 gi|407464422|ref|YP_006775304.1| - 9.4e-139 461.6 0.3 1.1e-138 461.5 0.2 1.0 1 0 0 1 1 1 1 Chorismate synthase EPSP_synthase PF00275.15 gi|407464423|ref|YP_006775305.1| - 1.3e-99 333.5 0.0 1.6e-99 333.2 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Shikimate_dh_N PF08501.6 gi|407464424|ref|YP_006775306.1| - 9.3e-28 96.1 0.0 2.6e-27 94.6 0.0 1.8 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.15 gi|407464424|ref|YP_006775306.1| - 2.2e-18 66.6 0.3 3.1e-18 66.1 0.2 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Saccharop_dh PF03435.13 gi|407464424|ref|YP_006775306.1| - 2.3e-06 26.8 0.4 3.5e-06 26.2 0.3 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase F420_oxidored PF03807.12 gi|407464424|ref|YP_006775306.1| - 0.00032 21.0 1.1 0.0006 20.1 0.8 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.1 gi|407464424|ref|YP_006775306.1| - 0.0016 18.6 0.1 0.0026 17.9 0.1 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding CBAH PF02275.13 gi|407464424|ref|YP_006775306.1| - 0.0087 15.5 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family OCD_Mu_crystall PF02423.10 gi|407464424|ref|YP_006775306.1| - 0.013 14.2 0.1 0.019 13.7 0.1 1.1 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family GARS_N PF02844.10 gi|407464424|ref|YP_006775306.1| - 0.059 13.8 0.2 0.15 12.5 0.1 1.7 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, N domain NAD_Gly3P_dh_N PF01210.18 gi|407464424|ref|YP_006775306.1| - 0.1 12.3 0.1 0.18 11.5 0.1 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DHquinase_I PF01487.10 gi|407464425|ref|YP_006775307.1| - 8.6e-56 189.0 0.0 9.6e-56 188.9 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase CTP_transf_2 PF01467.21 gi|407464425|ref|YP_006775307.1| - 0.017 15.1 0.0 0.026 14.5 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase EMG1 PF03587.9 gi|407464425|ref|YP_006775307.1| - 0.06 12.6 0.7 0.2 10.9 0.5 1.8 1 1 0 1 1 1 0 EMG1/NEP1 methyltransferase DHQS PF01959.11 gi|407464426|ref|YP_006775308.1| - 1.3e-115 385.8 0.5 1.6e-115 385.5 0.4 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase (EC 4.6.1.3) DeoC PF01791.4 gi|407464427|ref|YP_006775309.1| - 2.4e-47 161.2 0.0 2.9e-47 160.9 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase DUF561 PF04481.7 gi|407464427|ref|YP_006775309.1| - 0.11 11.4 0.1 0.21 10.5 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF561) Radical_SAM PF04055.16 gi|407464428|ref|YP_006775310.1| - 1.3e-17 64.4 0.0 2e-17 63.8 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily UbiD PF01977.11 gi|407464429|ref|YP_006775311.1| - 4.5e-158 525.9 0.2 5.2e-158 525.7 0.1 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase bZIP_2 PF07716.10 gi|407464431|ref|YP_006775313.1| - 0.018 14.8 2.0 0.018 14.8 1.4 2.3 2 1 0 2 2 2 0 Basic region leucine zipper Exonuc_VII_L PF02601.10 gi|407464431|ref|YP_006775313.1| - 0.022 13.9 5.1 0.023 13.9 3.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Striatin PF08232.7 gi|407464431|ref|YP_006775313.1| - 0.024 14.9 12.3 0.033 14.4 8.3 1.4 1 1 0 1 1 1 0 Striatin family Prefoldin_2 PF01920.15 gi|407464431|ref|YP_006775313.1| - 0.043 13.5 2.4 0.043 13.5 1.6 2.1 2 0 0 2 2 2 0 Prefoldin subunit Ribosomal_L29 PF00831.18 gi|407464431|ref|YP_006775313.1| - 0.043 13.4 0.9 0.043 13.4 0.6 2.2 2 0 0 2 2 2 0 Ribosomal L29 protein Cep57_CLD PF14073.1 gi|407464431|ref|YP_006775313.1| - 0.1 12.4 11.1 0.13 12.1 7.7 1.1 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 PTRF_SDPR PF15237.1 gi|407464431|ref|YP_006775313.1| - 0.57 9.5 8.3 0.9 8.8 5.7 1.4 1 1 0 1 1 1 0 PTRF/SDPR family ERM PF00769.14 gi|407464431|ref|YP_006775313.1| - 0.58 9.6 17.1 0.91 9.0 11.9 1.3 1 1 0 1 1 1 0 Ezrin/radixin/moesin family FAM60A PF15396.1 gi|407464431|ref|YP_006775313.1| - 0.79 9.4 3.3 0.95 9.1 2.3 1.1 1 0 0 1 1 1 0 Protein Family FAM60A DUF2730 PF10805.3 gi|407464431|ref|YP_006775313.1| - 0.79 9.4 4.3 0.52 10.0 0.5 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2730) DUF4407 PF14362.1 gi|407464431|ref|YP_006775313.1| - 0.8 8.6 14.5 0.95 8.3 10.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3408 PF11888.3 gi|407464431|ref|YP_006775313.1| - 1.2 9.1 12.6 0.12 12.2 4.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3408) Packaging_FI PF14000.1 gi|407464431|ref|YP_006775313.1| - 1.6 8.8 8.9 8.7 6.5 6.2 1.9 1 1 0 1 1 1 0 DNA packaging protein FI DUF4164 PF13747.1 gi|407464431|ref|YP_006775313.1| - 2.2 8.4 8.0 0.43 10.7 0.3 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) CitT PF12431.3 gi|407464431|ref|YP_006775313.1| - 2.6 8.2 0.0 2.6 8.2 0.0 3.2 4 0 0 4 4 3 0 Transcriptional regulator Atg14 PF10186.4 gi|407464431|ref|YP_006775313.1| - 2.6 6.8 7.6 3 6.7 5.3 1.1 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 AAA_13 PF13166.1 gi|407464431|ref|YP_006775313.1| - 3.1 6.1 10.3 3.6 5.9 7.2 1.0 1 0 0 1 1 1 0 AAA domain Spc24 PF08286.6 gi|407464431|ref|YP_006775313.1| - 3.1 7.5 10.2 0.28 10.8 3.0 1.9 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 YlqD PF11068.3 gi|407464431|ref|YP_006775313.1| - 3.3 7.7 11.7 6.4 6.8 8.0 1.5 1 1 0 1 1 1 0 YlqD protein DUF3138 PF11336.3 gi|407464431|ref|YP_006775313.1| - 3.5 5.6 6.3 3.6 5.6 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) DUF342 PF03961.8 gi|407464431|ref|YP_006775313.1| - 4.8 5.4 9.3 9.2 4.5 6.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF342) Enkurin PF13864.1 gi|407464431|ref|YP_006775313.1| - 5.6 7.2 11.2 0.78 9.9 0.5 2.3 2 1 0 2 2 2 0 Calmodulin-binding Vfa1 PF08432.5 gi|407464431|ref|YP_006775313.1| - 8.1 6.4 12.6 10 6.1 8.7 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 AhpC-TSA PF00578.16 gi|407464432|ref|YP_006775314.1| - 3.3e-41 139.8 0.1 3.8e-41 139.6 0.1 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|407464432|ref|YP_006775314.1| - 4.2e-26 91.2 0.0 4.6e-26 91.1 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.1 gi|407464432|ref|YP_006775314.1| - 2.1e-07 30.8 0.0 2.7e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme DUF899 PF05988.7 gi|407464432|ref|YP_006775314.1| - 2.2e-06 27.2 0.0 2.6e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) SCO1-SenC PF02630.9 gi|407464432|ref|YP_006775314.1| - 0.0063 16.1 1.0 0.021 14.4 0.7 1.7 1 1 0 1 1 1 1 SCO1/SenC MIP PF00230.15 gi|407464433|ref|YP_006775315.1| - 8.8e-53 179.0 20.4 1e-52 178.8 14.1 1.0 1 0 0 1 1 1 1 Major intrinsic protein Ldr_toxin PF13940.1 gi|407464433|ref|YP_006775315.1| - 0.0017 18.1 3.1 0.0017 18.1 0.5 2.3 2 0 0 2 2 2 1 Toxin Ldr, type I toxin-antitoxin system DUF445 PF04286.7 gi|407464434|ref|YP_006775316.1| - 0.014 14.9 3.2 0.015 14.8 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) Herpes_UL6 PF01763.11 gi|407464434|ref|YP_006775316.1| - 0.053 11.7 3.8 0.053 11.6 2.6 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Peptidase_C6 PF00851.13 gi|407464434|ref|YP_006775316.1| - 0.33 9.5 3.4 0.38 9.3 2.4 1.0 1 0 0 1 1 1 0 Helper component proteinase HSP20 PF00011.16 gi|407464436|ref|YP_006775318.1| - 1e-12 47.8 1.4 1.1e-11 44.4 1.0 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family PIH1 PF08190.7 gi|407464436|ref|YP_006775318.1| - 0.00011 21.7 0.0 0.00013 21.5 0.0 1.1 1 0 0 1 1 1 1 pre-RNA processing PIH1/Nop17 CS PF04969.11 gi|407464436|ref|YP_006775318.1| - 0.00093 19.6 0.2 0.0013 19.2 0.2 1.2 1 0 0 1 1 1 1 CS domain Fer4_7 PF12838.2 gi|407464437|ref|YP_006775319.1| - 1.4e-09 38.1 27.8 7.2e-06 26.2 7.0 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.22 gi|407464437|ref|YP_006775319.1| - 1.4e-09 37.1 11.8 5.2e-06 25.8 0.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|407464437|ref|YP_006775319.1| - 1e-08 35.0 0.4 0.0024 17.8 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|407464437|ref|YP_006775319.1| - 1.5e-07 31.1 2.6 0.00061 19.5 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|407464437|ref|YP_006775319.1| - 2.1e-07 31.0 7.3 1e-06 28.8 4.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|407464437|ref|YP_006775319.1| - 1.3e-06 27.9 12.4 0.0019 18.0 2.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|407464437|ref|YP_006775319.1| - 3.8e-06 27.5 4.1 0.0016 19.1 0.7 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|407464437|ref|YP_006775319.1| - 6.2e-06 25.9 19.1 7.5e-05 22.4 5.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|407464437|ref|YP_006775319.1| - 7.5e-06 25.5 10.9 0.013 15.3 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|407464437|ref|YP_006775319.1| - 1.3e-05 25.6 4.8 0.0052 17.3 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|407464437|ref|YP_006775319.1| - 1.3e-05 25.4 8.5 0.00011 22.5 4.2 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|407464437|ref|YP_006775319.1| - 5.9e-05 23.0 6.5 0.047 14.0 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|407464437|ref|YP_006775319.1| - 0.0002 21.2 1.8 0.079 12.8 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|407464437|ref|YP_006775319.1| - 0.00022 21.5 5.6 0.031 14.6 0.1 2.8 3 0 0 3 3 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|407464437|ref|YP_006775319.1| - 0.00029 21.1 5.7 0.023 15.0 5.1 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|407464437|ref|YP_006775319.1| - 0.055 14.0 16.0 0.2 12.3 1.2 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain DUF1073 PF06381.6 gi|407464437|ref|YP_006775319.1| - 0.17 10.3 0.0 0.23 9.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1073) Regulator_TrmB PF11495.3 gi|407464438|ref|YP_006775320.1| - 0.00044 19.2 0.0 0.0018 17.3 0.0 1.8 2 0 0 2 2 2 1 Archaeal transcriptional regulator TrmB HTH_20 PF12840.2 gi|407464438|ref|YP_006775320.1| - 0.0018 18.0 0.0 0.0029 17.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|407464438|ref|YP_006775320.1| - 0.0027 17.4 0.5 0.0099 15.6 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DUF4423 PF14394.1 gi|407464438|ref|YP_006775320.1| - 0.051 13.1 0.0 0.079 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Glyco_trans_1_2 PF13524.1 gi|407464439|ref|YP_006775321.1| - 0.12 12.6 0.1 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF4516 PF14990.1 gi|407464439|ref|YP_006775321.1| - 0.31 10.6 2.4 0.47 10.0 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) DZR PF12773.2 gi|407464440|ref|YP_006775322.1| - 0.003 17.3 10.2 0.011 15.4 7.0 1.9 1 1 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|407464440|ref|YP_006775322.1| - 0.0049 16.0 9.1 0.47 9.7 0.3 3.1 1 1 2 3 3 3 2 zinc-ribbon domain NOB1_Zn_bind PF08772.6 gi|407464440|ref|YP_006775322.1| - 0.0061 16.3 6.1 0.044 13.6 4.3 2.1 1 1 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like UPF0547 PF10571.4 gi|407464440|ref|YP_006775322.1| - 0.0085 15.7 8.2 1.9 8.2 4.3 2.9 2 1 0 2 2 2 1 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.1 gi|407464440|ref|YP_006775322.1| - 0.0091 15.4 10.2 0.85 9.1 2.0 3.2 1 1 1 2 2 2 1 zinc-ribbon domain DUF1272 PF06906.6 gi|407464440|ref|YP_006775322.1| - 0.016 15.0 6.3 0.46 10.3 4.3 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) zinc-ribbons_6 PF07191.7 gi|407464440|ref|YP_006775322.1| - 0.029 14.1 9.7 0.12 12.1 6.7 2.1 1 1 0 1 1 1 0 zinc-ribbons Nudix_N_2 PF14803.1 gi|407464440|ref|YP_006775322.1| - 0.071 12.8 5.4 6.5 6.5 0.1 3.1 1 1 1 2 2 2 0 Nudix N-terminal Zn-ribbon_8 PF09723.5 gi|407464440|ref|YP_006775322.1| - 0.13 12.2 7.5 0.52 10.2 5.2 2.4 1 1 0 1 1 1 0 Zinc ribbon domain PolC_DP2 PF03833.8 gi|407464440|ref|YP_006775322.1| - 0.15 9.7 4.8 0.14 9.7 3.3 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DNA_RNApol_7kD PF03604.8 gi|407464440|ref|YP_006775322.1| - 0.29 10.6 8.8 79 2.8 6.1 2.9 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Auto_anti-p27 PF06677.7 gi|407464440|ref|YP_006775322.1| - 0.3 10.8 9.4 5 6.9 0.1 3.2 2 1 1 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Ribosomal_L32p PF01783.18 gi|407464440|ref|YP_006775322.1| - 0.54 10.4 4.9 2.6 8.2 3.4 2.0 1 1 0 1 1 1 0 Ribosomal L32p protein family zf-MYND PF01753.13 gi|407464440|ref|YP_006775322.1| - 0.9 9.4 6.4 2.4 8.1 3.8 2.0 1 1 0 1 1 1 0 MYND finger TF_Zn_Ribbon PF08271.7 gi|407464440|ref|YP_006775322.1| - 1.1 8.5 8.7 3.6 6.9 0.1 3.0 2 1 0 2 2 2 0 TFIIB zinc-binding zf-HYPF PF07503.7 gi|407464440|ref|YP_006775322.1| - 1.3 8.4 8.4 3.2 7.2 0.0 3.1 2 1 1 3 3 3 0 HypF finger zf-AN1 PF01428.11 gi|407464440|ref|YP_006775322.1| - 1.9 8.4 7.9 1.1 9.2 1.8 2.3 1 1 1 2 2 2 0 AN1-like Zinc finger HypA PF01155.14 gi|407464440|ref|YP_006775322.1| - 1.9 8.2 8.6 2.8 7.6 5.7 1.6 1 1 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-IS66 PF13005.2 gi|407464440|ref|YP_006775322.1| - 1.9 8.5 12.1 2.3 8.2 0.3 3.2 1 1 2 3 3 3 0 zinc-finger binding domain of transposase IS66 zf-B_box PF00643.19 gi|407464440|ref|YP_006775322.1| - 2 8.3 9.3 2.6 8.0 5.8 1.7 1 1 0 1 1 1 0 B-box zinc finger zf-NADH-PPase PF09297.6 gi|407464440|ref|YP_006775322.1| - 2.4 7.7 5.0 3.9 7.0 0.0 2.7 2 1 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-C3HC4_3 PF13920.1 gi|407464440|ref|YP_006775322.1| - 3.8 7.2 8.9 8.8 6.0 5.3 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) A2L_zn_ribbon PF08792.5 gi|407464440|ref|YP_006775322.1| - 5.4 6.6 11.8 20 4.8 0.3 3.3 1 1 1 2 2 2 0 A2L zinc ribbon domain DUF35_N PF12172.3 gi|407464440|ref|YP_006775322.1| - 5.5 7.0 5.9 17 5.4 0.0 2.7 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) GFA PF04828.9 gi|407464440|ref|YP_006775322.1| - 5.8 6.9 7.9 34 4.4 2.1 2.6 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Zn_Tnp_IS1595 PF12760.2 gi|407464440|ref|YP_006775322.1| - 8 6.3 9.4 2.2 8.1 0.2 2.6 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Cript PF10235.4 gi|407464440|ref|YP_006775322.1| - 8.4 6.8 10.3 39 4.6 7.2 2.1 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT YkyA PF10368.4 gi|407464441|ref|YP_006775323.1| - 0.0041 16.5 7.2 0.0047 16.2 5.0 1.1 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein COG5 PF10392.4 gi|407464441|ref|YP_006775323.1| - 0.043 13.7 1.0 0.047 13.6 0.7 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 TMF_TATA_bd PF12325.3 gi|407464441|ref|YP_006775323.1| - 0.046 13.4 4.1 0.052 13.2 2.8 1.2 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding BBP1_C PF15272.1 gi|407464441|ref|YP_006775323.1| - 0.048 13.2 6.7 0.052 13.0 4.7 1.0 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal DUF349 PF03993.7 gi|407464441|ref|YP_006775323.1| - 0.067 13.3 5.3 0.079 13.1 3.7 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF349) TBD PF12845.2 gi|407464441|ref|YP_006775323.1| - 0.089 12.3 0.9 4.3 6.9 0.1 2.2 2 0 0 2 2 2 0 TBD domain Cauli_AT PF03233.8 gi|407464441|ref|YP_006775323.1| - 0.1 12.3 4.2 0.11 12.2 2.9 1.0 1 0 0 1 1 1 0 Aphid transmission protein Macro PF01661.16 gi|407464441|ref|YP_006775323.1| - 0.11 12.4 0.2 0.15 11.9 0.2 1.3 1 0 0 1 1 1 0 Macro domain HGD-D PF06050.8 gi|407464441|ref|YP_006775323.1| - 0.11 11.3 1.9 0.11 11.3 1.3 1.0 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component BLOC1_2 PF10046.4 gi|407464441|ref|YP_006775323.1| - 0.11 12.6 5.4 0.13 12.3 3.7 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF2331 PF10093.4 gi|407464441|ref|YP_006775323.1| - 0.12 11.1 1.3 0.12 11.1 0.9 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2331) DUF919 PF06034.6 gi|407464441|ref|YP_006775323.1| - 0.15 11.7 6.4 0.093 12.3 3.5 1.5 1 1 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF919) IncA PF04156.9 gi|407464441|ref|YP_006775323.1| - 0.2 11.1 3.4 0.24 10.9 2.4 1.1 1 0 0 1 1 1 0 IncA protein WXG100 PF06013.7 gi|407464441|ref|YP_006775323.1| - 0.21 11.5 1.6 12 5.9 0.1 2.0 1 1 1 2 2 2 0 Proteins of 100 residues with WXG DUF4207 PF13904.1 gi|407464441|ref|YP_006775323.1| - 0.22 10.8 4.6 0.23 10.8 3.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4207) OmpH PF03938.9 gi|407464441|ref|YP_006775323.1| - 0.24 11.3 6.7 0.26 11.2 4.6 1.0 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Med4 PF10018.4 gi|407464441|ref|YP_006775323.1| - 0.24 10.7 4.8 0.24 10.7 3.3 1.1 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 HALZ PF02183.13 gi|407464441|ref|YP_006775323.1| - 0.33 10.6 6.6 1.9 8.2 4.5 2.3 1 1 0 1 1 1 0 Homeobox associated leucine zipper Syntaxin_2 PF14523.1 gi|407464441|ref|YP_006775323.1| - 0.34 10.9 3.9 1.2 9.1 2.2 1.8 1 1 1 2 2 2 0 Syntaxin-like protein 4HB_MCP_1 PF12729.2 gi|407464441|ref|YP_006775323.1| - 0.38 10.0 7.5 0.44 9.8 5.2 1.1 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction Spc7 PF08317.6 gi|407464441|ref|YP_006775323.1| - 0.43 9.1 6.6 0.44 9.1 4.5 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Seryl_tRNA_N PF02403.17 gi|407464441|ref|YP_006775323.1| - 0.72 9.8 6.4 0.83 9.6 4.4 1.2 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Mnd1 PF03962.10 gi|407464441|ref|YP_006775323.1| - 0.73 9.4 6.5 0.86 9.2 4.5 1.1 1 0 0 1 1 1 0 Mnd1 family FlxA PF14282.1 gi|407464441|ref|YP_006775323.1| - 0.77 9.7 5.5 0.88 9.5 3.8 1.1 1 0 0 1 1 1 0 FlxA-like protein K-box PF01486.12 gi|407464441|ref|YP_006775323.1| - 0.92 9.3 7.4 16 5.4 5.1 2.0 1 1 0 1 1 1 0 K-box region Elongin_A PF06881.6 gi|407464441|ref|YP_006775323.1| - 1.3 9.4 5.7 1.4 9.3 3.9 1.1 1 0 0 1 1 1 0 RNA polymerase II transcription factor SIII (Elongin) subunit A FemAB PF02388.11 gi|407464441|ref|YP_006775323.1| - 2.2 6.8 6.6 2.3 6.7 4.6 1.0 1 0 0 1 1 1 0 FemAB family DUF106 PF01956.11 gi|407464441|ref|YP_006775323.1| - 2.6 7.5 5.0 2.5 7.5 3.4 1.0 1 0 0 1 1 1 0 Integral membrane protein DUF106 DUF4337 PF14235.1 gi|407464441|ref|YP_006775323.1| - 6.1 6.6 6.5 7.3 6.4 4.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) AAA_23 PF13476.1 gi|407464441|ref|YP_006775323.1| - 8.1 6.7 10.7 8.6 6.6 7.4 1.1 1 0 0 1 1 1 0 AAA domain Methyltransf_23 PF13489.1 gi|407464442|ref|YP_006775324.1| - 0.047 13.4 0.0 0.084 12.5 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain TFIIB PF00382.14 gi|407464443|ref|YP_006775325.1| - 2.6e-39 132.8 8.3 1.7e-20 72.6 0.5 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|407464443|ref|YP_006775325.1| - 2.2e-09 36.4 3.5 3.6e-09 35.7 2.4 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.18 gi|407464443|ref|YP_006775325.1| - 1.3e-06 28.0 1.2 0.00097 18.7 0.2 2.2 2 0 0 2 2 2 2 Cyclin, N-terminal domain zf-ribbon_3 PF13248.1 gi|407464443|ref|YP_006775325.1| - 1.9e-06 26.8 0.9 3.7e-06 25.9 0.6 1.5 1 0 0 1 1 1 1 zinc-ribbon domain Sigma70_r4 PF04545.11 gi|407464443|ref|YP_006775325.1| - 5e-06 25.7 0.1 0.024 13.9 0.0 2.9 2 0 0 2 2 2 2 Sigma-70, region 4 Ribosomal_S27e PF01667.12 gi|407464443|ref|YP_006775325.1| - 0.00015 21.2 1.8 0.00031 20.2 1.3 1.4 1 0 0 1 1 1 1 Ribosomal protein S27 HTH_3 PF01381.17 gi|407464443|ref|YP_006775325.1| - 0.00084 19.1 0.0 0.13 12.1 0.0 2.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_11 PF08279.7 gi|407464443|ref|YP_006775325.1| - 0.0052 16.4 4.4 0.006 16.2 0.0 2.8 3 0 0 3 3 3 1 HTH domain Lar_restr_allev PF14354.1 gi|407464443|ref|YP_006775325.1| - 0.0059 16.8 0.4 0.014 15.6 0.3 1.6 1 0 0 1 1 1 1 Restriction alleviation protein Lar zf-ISL3 PF14690.1 gi|407464443|ref|YP_006775325.1| - 0.006 16.5 0.1 4.6 7.3 0.0 2.5 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Cyclin_C PF02984.14 gi|407464443|ref|YP_006775325.1| - 0.0075 16.1 2.5 2.5 8.0 0.1 3.1 1 1 1 2 2 2 1 Cyclin, C-terminal domain DZR PF12773.2 gi|407464443|ref|YP_006775325.1| - 0.0097 15.7 0.3 0.022 14.5 0.2 1.6 1 0 0 1 1 1 1 Double zinc ribbon HTH_AsnC-type PF13404.1 gi|407464443|ref|YP_006775325.1| - 0.014 14.9 0.5 0.3 10.6 0.0 3.0 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain DUF329 PF03884.9 gi|407464443|ref|YP_006775325.1| - 0.017 14.6 0.5 0.036 13.6 0.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF329) HTH_Mga PF08280.6 gi|407464443|ref|YP_006775325.1| - 0.034 13.8 2.5 0.08 12.7 0.0 2.8 3 0 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain T3SS_LEE_assoc PF13327.1 gi|407464443|ref|YP_006775325.1| - 0.042 13.4 1.2 1.3 8.5 0.0 2.5 2 1 1 3 3 3 0 Type III secretion system subunit Nudix_N_2 PF14803.1 gi|407464443|ref|YP_006775325.1| - 0.044 13.4 1.3 0.41 10.3 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal HTH_24 PF13412.1 gi|407464443|ref|YP_006775325.1| - 0.059 12.7 0.1 0.059 12.7 0.1 3.1 4 0 0 4 4 4 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|407464443|ref|YP_006775325.1| - 0.075 12.7 0.3 0.86 9.3 0.0 2.6 2 0 0 2 2 2 0 Homeodomain-like domain OrfB_Zn_ribbon PF07282.6 gi|407464443|ref|YP_006775325.1| - 0.092 12.4 0.9 0.3 10.7 0.6 1.9 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.1 gi|407464443|ref|YP_006775325.1| - 0.23 10.9 8.1 11 5.6 5.6 2.4 1 1 0 1 1 1 0 zinc-ribbon domain GerE PF00196.14 gi|407464443|ref|YP_006775325.1| - 0.31 10.3 3.6 0.79 9.0 0.0 2.9 3 0 0 3 3 3 0 Bacterial regulatory proteins, luxR family NOB1_Zn_bind PF08772.6 gi|407464443|ref|YP_006775325.1| - 0.42 10.4 3.9 10 6.0 0.2 3.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Mu-like_Com PF10122.4 gi|407464443|ref|YP_006775325.1| - 1.4 8.0 4.9 0.55 9.3 0.7 2.3 2 1 0 2 2 2 0 Mu-like prophage protein Com zf-FPG_IleRS PF06827.9 gi|407464443|ref|YP_006775325.1| - 5.5 6.7 6.8 7.7 6.2 3.5 2.2 2 1 0 2 2 1 0 Zinc finger found in FPG and IleRS CBS PF00571.23 gi|407464445|ref|YP_006775327.1| - 4.9e-37 125.4 1.8 4.9e-09 35.8 0.0 4.3 4 0 0 4 4 4 4 CBS domain FATC PF02260.15 gi|407464445|ref|YP_006775327.1| - 0.027 13.8 0.0 0.079 12.4 0.0 1.8 2 0 0 2 2 2 0 FATC domain UPF0047 PF01894.12 gi|407464446|ref|YP_006775328.1| - 8.8e-35 119.0 0.0 1.1e-34 118.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF2505 PF10698.4 gi|407464446|ref|YP_006775328.1| - 0.036 13.5 0.0 0.047 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2505) YbaB_DNA_bd PF02575.11 gi|407464446|ref|YP_006775328.1| - 0.049 13.5 0.0 0.13 12.1 0.0 1.7 1 1 0 1 1 1 0 YbaB/EbfC DNA-binding family DNase-RNase PF02577.9 gi|407464447|ref|YP_006775329.1| - 2.3e-11 43.0 0.0 2.8e-11 42.7 0.0 1.1 1 0 0 1 1 1 1 Bifunctional nuclease DUF2570 PF10828.3 gi|407464448|ref|YP_006775330.1| - 0.0037 16.8 6.0 0.0039 16.7 4.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2570) UBN2 PF14223.1 gi|407464448|ref|YP_006775330.1| - 0.021 14.6 5.3 0.04 13.7 1.0 2.0 1 1 1 2 2 2 0 gag-polypeptide of LTR copia-type Syntaxin_2 PF14523.1 gi|407464448|ref|YP_006775330.1| - 0.042 13.8 3.5 0.048 13.7 2.4 1.1 1 0 0 1 1 1 0 Syntaxin-like protein BRX PF08381.6 gi|407464448|ref|YP_006775330.1| - 0.11 11.6 0.1 0.21 10.7 0.1 1.5 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 FlpD PF02662.11 gi|407464448|ref|YP_006775330.1| - 0.17 11.5 1.1 0.23 11.1 0.7 1.4 1 1 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit MRP-S26 PF14943.1 gi|407464448|ref|YP_006775330.1| - 0.45 10.0 7.3 0.47 10.0 5.0 1.0 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 PGBA_C PF15437.1 gi|407464448|ref|YP_006775330.1| - 0.77 9.9 5.5 0.86 9.7 3.8 1.3 1 1 0 1 1 1 0 Plasminogen-binding protein pgbA C-terminal Isochorismatase PF00857.15 gi|407464450|ref|YP_006775332.1| - 1.5e-29 103.1 0.0 1.9e-29 102.8 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family FAM75 PF14650.1 gi|407464451|ref|YP_006775333.1| - 0.0041 16.5 2.4 0.0042 16.5 1.7 1.0 1 0 0 1 1 1 1 FAM75 family Pox_F11 PF04943.7 gi|407464451|ref|YP_006775333.1| - 0.089 11.6 1.6 0.094 11.5 1.1 1.0 1 0 0 1 1 1 0 Poxvirus F11 protein DUF4473 PF14747.1 gi|407464451|ref|YP_006775333.1| - 0.92 9.7 5.3 1.1 9.5 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) XhlA PF10779.4 gi|407464451|ref|YP_006775333.1| - 0.94 9.4 4.0 1.2 9.0 2.8 1.1 1 0 0 1 1 1 0 Haemolysin XhlA DUF1542 PF07564.6 gi|407464451|ref|YP_006775333.1| - 0.94 9.5 6.7 2.2 8.3 4.6 1.7 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1542) Bap31 PF05529.7 gi|407464451|ref|YP_006775333.1| - 1.5 8.2 6.0 1.6 8.1 4.2 1.0 1 0 0 1 1 1 0 B-cell receptor-associated protein 31-like Cut12 PF11500.3 gi|407464451|ref|YP_006775333.1| - 3.4 7.3 8.7 4 7.1 6.0 1.0 1 0 0 1 1 1 0 Spindle pole body formation-associated protein Clusterin PF01093.12 gi|407464452|ref|YP_006775334.1| - 0.002 16.9 1.7 0.0021 16.9 1.2 1.0 1 0 0 1 1 1 1 Clusterin EIF_2_alpha PF07541.7 gi|407464452|ref|YP_006775334.1| - 0.052 13.2 0.1 0.12 12.0 0.1 1.6 1 1 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit DUF972 PF06156.8 gi|407464452|ref|YP_006775334.1| - 0.33 11.2 2.5 17 5.8 0.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF972) YkyA PF10368.4 gi|407464452|ref|YP_006775334.1| - 0.4 9.9 6.2 0.17 11.1 2.5 1.7 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein CBS PF00571.23 gi|407464453|ref|YP_006775335.1| - 4.1e-45 151.3 2.0 5.4e-10 38.8 0.1 4.1 4 0 0 4 4 4 4 CBS domain HSP20 PF00011.16 gi|407464455|ref|YP_006775337.1| - 7.9e-15 54.5 0.3 9.2e-15 54.3 0.2 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family DUF4097 PF13349.1 gi|407464455|ref|YP_006775337.1| - 0.00017 21.1 3.4 0.0022 17.5 2.0 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4097) CS PF04969.11 gi|407464455|ref|YP_006775337.1| - 0.00054 20.4 3.2 0.0017 18.8 2.2 1.8 1 1 0 1 1 1 1 CS domain DUF4162 PF13732.1 gi|407464455|ref|YP_006775337.1| - 0.093 13.2 1.5 0.63 10.5 1.0 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4162) PAC2 PF09754.4 gi|407464456|ref|YP_006775338.1| - 2.6e-29 102.6 0.0 3e-29 102.4 0.0 1.0 1 0 0 1 1 1 1 PAC2 family MADF_DNA_bdg PF10545.4 gi|407464456|ref|YP_006775338.1| - 0.07 13.3 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like SicP-binding PF09119.5 gi|407464456|ref|YP_006775338.1| - 0.092 12.4 0.1 0.3 10.8 0.0 1.9 2 0 0 2 2 2 0 SicP binding REGB_T4 PF10715.4 gi|407464457|ref|YP_006775339.1| - 0.04 14.0 0.3 0.049 13.7 0.2 1.2 1 0 0 1 1 1 0 Endoribonuclease RegB T4-bacteriophage encoded DUF948 PF06103.6 gi|407464458|ref|YP_006775340.1| - 0.016 15.0 0.7 0.031 14.1 0.5 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) SHOCT PF09851.4 gi|407464458|ref|YP_006775340.1| - 3.5 7.2 7.1 0.43 10.1 1.5 2.3 2 0 0 2 2 2 0 Short C-terminal domain DUF2975 PF11188.3 gi|407464459|ref|YP_006775341.1| - 0.0039 16.9 2.2 0.0045 16.7 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2975) Sulfate_tra_GLY PF13792.1 gi|407464459|ref|YP_006775341.1| - 0.032 13.9 1.8 0.042 13.5 1.3 1.3 1 0 0 1 1 1 0 Sulfate transporter N-terminal domain with GLY motif DUF3754 PF12576.3 gi|407464459|ref|YP_006775341.1| - 0.17 11.4 2.5 0.24 11.0 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3754) E1-E2_ATPase PF00122.15 gi|407464459|ref|YP_006775341.1| - 0.19 10.7 2.9 0.24 10.4 2.0 1.1 1 0 0 1 1 1 0 E1-E2 ATPase TM_helix PF05552.7 gi|407464459|ref|YP_006775341.1| - 0.34 10.6 11.8 1.7 8.3 8.2 2.0 1 1 0 1 1 1 0 Conserved TM helix DUF4235 PF14019.1 gi|407464459|ref|YP_006775341.1| - 0.35 10.7 9.7 3.7 7.4 6.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF4235) DUF4282 PF14110.1 gi|407464459|ref|YP_006775341.1| - 0.92 9.7 5.5 1.3 9.2 3.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) DUF4349 PF14257.1 gi|407464459|ref|YP_006775341.1| - 2.7 7.1 5.2 3.7 6.7 3.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4349) DLH PF01738.13 gi|407464460|ref|YP_006775342.1| - 6.1e-52 176.0 0.0 7.8e-52 175.7 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_5 PF12695.2 gi|407464460|ref|YP_006775342.1| - 2.1e-16 60.0 0.1 3e-16 59.4 0.1 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.2 gi|407464460|ref|YP_006775342.1| - 1.7e-08 34.6 0.2 4.3e-05 23.4 0.1 2.2 1 1 1 2 2 2 2 Alpha/beta hydrolase family Chlorophyllase2 PF12740.2 gi|407464460|ref|YP_006775342.1| - 1.4e-05 24.0 0.0 2.3e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme Chlorophyllase PF07224.6 gi|407464460|ref|YP_006775342.1| - 2.6e-05 23.2 0.0 3.5e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase Peptidase_S9 PF00326.16 gi|407464460|ref|YP_006775342.1| - 0.00029 20.1 0.4 0.025 13.8 0.0 2.1 1 1 1 2 2 2 1 Prolyl oligopeptidase family BAAT_C PF08840.6 gi|407464460|ref|YP_006775342.1| - 0.00072 19.3 0.2 0.018 14.7 0.0 2.3 1 1 1 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal CBS PF00571.23 gi|407464461|ref|YP_006775343.1| - 1.4e-26 91.9 0.6 1.1e-13 50.6 0.0 2.1 2 0 0 2 2 2 2 CBS domain BioY PF02632.9 gi|407464462|ref|YP_006775344.1| - 0.49 10.0 3.6 0.7 9.5 1.3 1.8 1 1 1 2 2 2 0 BioY family Yip1 PF04893.12 gi|407464462|ref|YP_006775344.1| - 3.1 7.2 8.3 5.4 6.4 5.7 1.5 1 1 0 1 1 1 0 Yip1 domain YqzM PF14141.1 gi|407464462|ref|YP_006775344.1| - 5.7 6.8 6.3 0.39 10.5 0.4 2.0 3 0 0 3 3 3 0 YqzM-like protein Adenine_glyco PF03352.8 gi|407464463|ref|YP_006775345.1| - 3.9e-82 274.0 0.7 4.5e-82 273.8 0.5 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase Imm8 PF15560.1 gi|407464463|ref|YP_006775345.1| - 1.5 8.4 5.8 0.68 9.6 0.7 2.4 1 1 1 3 3 3 0 Immunity protein 8 DUF4494 PF14902.1 gi|407464464|ref|YP_006775346.1| - 0.03 13.9 0.1 0.046 13.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4494) Ferritin PF00210.19 gi|407464466|ref|YP_006775348.1| - 1.3e-35 122.2 0.5 1.5e-35 121.9 0.3 1.1 1 0 0 1 1 1 1 Ferritin-like domain DUF4423 PF14394.1 gi|407464467|ref|YP_006775349.1| - 0.03 13.8 0.2 0.038 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) LigT_PEase PF02834.11 gi|407464467|ref|YP_006775349.1| - 0.056 13.4 0.0 0.085 12.8 0.0 1.4 1 0 0 1 1 1 0 LigT like Phosphoesterase DUF1284 PF06935.6 gi|407464468|ref|YP_006775350.1| - 0.025 14.7 3.6 0.03 14.4 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1284) Metallothio_Euk PF12749.2 gi|407464468|ref|YP_006775350.1| - 0.071 13.1 7.6 0.082 12.9 5.2 1.1 1 0 0 1 1 1 0 Eukaryotic metallothionein FYVE_2 PF02318.11 gi|407464468|ref|YP_006775350.1| - 0.62 9.9 8.0 0.72 9.7 5.6 1.0 1 0 0 1 1 1 0 FYVE-type zinc finger GCC2_GCC3 PF07699.8 gi|407464468|ref|YP_006775350.1| - 1 8.9 7.2 1.4 8.5 5.0 1.2 1 0 0 1 1 1 0 GCC2 and GCC3 DUF3990 PF13151.1 gi|407464469|ref|YP_006775351.1| - 0.017 14.4 0.0 0.025 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3990) Pyridox_oxidase PF01243.15 gi|407464471|ref|YP_006775353.1| - 7e-16 58.0 0.0 8.7e-16 57.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.7 gi|407464471|ref|YP_006775353.1| - 0.062 12.8 0.0 0.065 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) EzrA PF06160.7 gi|407464472|ref|YP_006775354.1| - 0.0008 17.7 38.7 0.0032 15.7 7.8 3.0 2 1 1 3 3 3 3 Septation ring formation regulator, EzrA Cylicin_N PF15241.1 gi|407464472|ref|YP_006775354.1| - 0.00085 19.1 1.0 0.00085 19.1 0.7 2.3 2 1 1 3 3 3 1 Cylicin N-terminus WEMBL PF05701.6 gi|407464472|ref|YP_006775354.1| - 0.00088 17.8 49.2 0.0016 16.9 4.6 2.2 2 0 0 2 2 2 2 Weak chloroplast movement under blue light IncA PF04156.9 gi|407464472|ref|YP_006775354.1| - 0.0024 17.4 43.2 0.045 13.3 9.4 3.1 2 1 1 3 3 3 3 IncA protein Tropomyosin PF00261.15 gi|407464472|ref|YP_006775354.1| - 0.0071 15.4 9.9 0.0071 15.4 6.9 3.2 3 0 0 3 3 3 1 Tropomyosin Reo_sigmaC PF04582.7 gi|407464472|ref|YP_006775354.1| - 0.0097 15.1 9.3 0.075 12.2 1.8 2.2 1 1 1 2 2 2 2 Reovirus sigma C capsid protein TPR_MLP1_2 PF07926.7 gi|407464472|ref|YP_006775354.1| - 0.015 15.0 45.1 0.99 9.1 9.4 3.6 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein FliJ PF02050.11 gi|407464472|ref|YP_006775354.1| - 0.028 14.4 34.7 0.3 11.1 1.2 3.6 2 1 1 3 3 3 0 Flagellar FliJ protein Cast PF10174.4 gi|407464472|ref|YP_006775354.1| - 0.042 11.9 48.1 0.061 11.3 2.9 2.2 2 0 0 2 2 2 0 RIM-binding protein of the cytomatrix active zone DUF3584 PF12128.3 gi|407464472|ref|YP_006775354.1| - 0.061 10.6 36.3 0.15 9.4 25.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) APG6 PF04111.7 gi|407464472|ref|YP_006775354.1| - 0.086 11.8 44.9 0.29 10.1 10.7 3.0 2 1 1 3 3 3 0 Autophagy protein Apg6 HrpB7 PF09486.5 gi|407464472|ref|YP_006775354.1| - 0.15 12.0 12.0 1.7 8.5 0.1 3.4 2 1 0 3 3 3 0 Bacterial type III secretion protein (HrpB7) DUF948 PF06103.6 gi|407464472|ref|YP_006775354.1| - 0.18 11.6 18.9 1.8 8.4 1.4 3.5 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF4398 PF14346.1 gi|407464472|ref|YP_006775354.1| - 0.34 10.9 17.7 0.34 10.9 1.5 3.6 3 1 0 3 3 3 0 Domain of unknown function (DUF4398) MscS_porin PF12795.2 gi|407464472|ref|YP_006775354.1| - 0.46 9.7 28.9 0.11 11.7 6.4 3.2 1 1 2 3 3 3 0 Mechanosensitive ion channel porin domain Laminin_II PF06009.7 gi|407464472|ref|YP_006775354.1| - 0.49 10.1 28.6 1 9.1 2.6 3.3 2 1 1 3 3 3 0 Laminin Domain II CENP-F_leu_zip PF10473.4 gi|407464472|ref|YP_006775354.1| - 0.9 9.4 56.8 2 8.2 6.6 3.2 1 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 MtrG PF04210.8 gi|407464472|ref|YP_006775354.1| - 1.2 8.8 15.3 0.2 11.3 0.4 3.8 3 2 1 4 4 4 0 Tetrahydromethanopterin S-methyltransferase, subunit G IFT57 PF10498.4 gi|407464472|ref|YP_006775354.1| - 1.3 7.6 41.4 2.1 6.9 19.6 3.0 1 1 0 2 2 2 0 Intra-flagellar transport protein 57 EF1G PF00647.14 gi|407464472|ref|YP_006775354.1| - 1.8 8.2 7.0 0.63 9.7 0.7 2.8 2 1 1 3 3 3 0 Elongation factor 1 gamma, conserved domain Spectrin PF00435.16 gi|407464472|ref|YP_006775354.1| - 2.1 8.6 29.3 3 8.1 4.6 3.5 2 1 1 3 3 3 0 Spectrin repeat NPV_P10 PF05531.7 gi|407464472|ref|YP_006775354.1| - 2.6 8.3 11.6 19 5.5 0.2 3.9 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein Alpha-E PF04168.7 gi|407464472|ref|YP_006775354.1| - 3.2 7.0 7.4 3.1 7.1 0.6 2.4 1 1 1 2 2 2 0 A predicted alpha-helical domain with a conserved ER motif. WXG100 PF06013.7 gi|407464472|ref|YP_006775354.1| - 4.3 7.4 13.1 19 5.3 0.1 4.4 3 2 1 4 4 4 0 Proteins of 100 residues with WXG FliT PF05400.8 gi|407464472|ref|YP_006775354.1| - 5.4 7.4 18.6 2.6 8.5 0.7 3.7 2 1 2 4 4 4 0 Flagellar protein FliT ADIP PF11559.3 gi|407464472|ref|YP_006775354.1| - 5.5 6.8 39.1 3.2 7.6 6.7 3.2 2 1 1 3 3 3 0 Afadin- and alpha -actinin-Binding DUF972 PF06156.8 gi|407464472|ref|YP_006775354.1| - 5.7 7.3 36.8 2 8.8 4.0 3.5 3 1 0 3 3 3 0 Protein of unknown function (DUF972) ATG16 PF08614.6 gi|407464472|ref|YP_006775354.1| - 10 5.9 37.9 8.7 6.1 9.5 3.1 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) DUF202 PF02656.10 gi|407464473|ref|YP_006775355.1| - 0.071 13.3 0.6 0.087 13.0 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF202) DUF2207 PF09972.4 gi|407464473|ref|YP_006775355.1| - 0.12 10.8 0.3 0.12 10.8 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) IncA PF04156.9 gi|407464473|ref|YP_006775355.1| - 1.5 8.3 5.8 1.8 8.1 4.0 1.0 1 0 0 1 1 1 0 IncA protein tRNA-synt_1f PF01921.13 gi|407464474|ref|YP_006775356.1| - 6.3e-108 360.6 0.1 1.1e-107 359.9 0.0 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.6 gi|407464474|ref|YP_006775356.1| - 0.012 14.2 0.3 0.033 12.8 0.0 1.9 2 0 0 2 2 2 0 tRNA synthetases class I (M) PolyA_pol_RNAbd PF12627.2 gi|407464474|ref|YP_006775356.1| - 0.017 14.7 0.0 0.042 13.4 0.0 1.7 1 0 0 1 1 1 0 Probable RNA and SrmB- binding site of polymerase A tRNA-synt_1e PF01406.14 gi|407464474|ref|YP_006775356.1| - 0.052 12.6 0.0 0.1 11.7 0.0 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.17 gi|407464474|ref|YP_006775356.1| - 0.056 11.4 0.0 0.089 10.7 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) Thioredoxin_3 PF13192.1 gi|407464474|ref|YP_006775356.1| - 0.32 10.8 2.3 0.86 9.4 0.5 2.4 2 0 0 2 2 2 0 Thioredoxin domain Radical_SAM PF04055.16 gi|407464475|ref|YP_006775357.1| - 1.2e-19 71.1 0.0 3.7e-19 69.5 0.0 1.8 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.19 gi|407464475|ref|YP_006775357.1| - 2.4e-06 27.4 0.0 8.5e-06 25.7 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|407464475|ref|YP_006775357.1| - 0.0085 16.2 0.0 0.054 13.6 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain UCR_UQCRX_QCR9 PF05365.7 gi|407464475|ref|YP_006775357.1| - 0.15 11.7 0.0 0.37 10.4 0.0 1.6 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like HC2 PF07382.6 gi|407464476|ref|YP_006775358.1| - 0.0012 18.8 62.9 0.0016 18.3 43.6 1.1 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 TFX_C PF14601.1 gi|407464476|ref|YP_006775358.1| - 0.0067 16.1 0.6 0.017 14.8 0.4 1.7 1 0 0 1 1 1 1 DNA_binding protein, TFX, C-term DUF2670 PF10875.3 gi|407464476|ref|YP_006775358.1| - 0.44 10.5 2.6 0.63 10.0 0.2 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF2670) Na_H_Exchanger PF00999.16 gi|407464477|ref|YP_006775359.1| - 1e-65 221.7 53.7 1.3e-65 221.3 37.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family PspB PF06667.7 gi|407464477|ref|YP_006775359.1| - 0.053 13.4 0.1 0.053 13.4 0.1 2.4 2 0 0 2 2 2 0 Phage shock protein B AIRS_C PF02769.17 gi|407464478|ref|YP_006775360.1| - 2.6e-23 82.7 0.0 4.6e-23 81.9 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|407464478|ref|YP_006775360.1| - 1.1e-16 60.8 1.4 2.5e-16 59.6 1.0 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain PAC2 PF09754.4 gi|407464479|ref|YP_006775361.1| - 2.1e-39 135.6 0.0 2.6e-39 135.3 0.0 1.0 1 0 0 1 1 1 1 PAC2 family DUF3410 PF11890.3 gi|407464479|ref|YP_006775361.1| - 0.011 15.3 0.1 0.02 14.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) Myosin_tail_1 PF01576.14 gi|407464479|ref|YP_006775361.1| - 0.023 12.4 0.2 0.03 12.0 0.2 1.1 1 0 0 1 1 1 0 Myosin tail 7TMR-HDED PF07697.6 gi|407464479|ref|YP_006775361.1| - 0.058 13.1 0.0 0.068 12.8 0.0 1.1 1 0 0 1 1 1 0 7TM-HD extracellular DUF21 PF01595.15 gi|407464480|ref|YP_006775362.1| - 5.2e-46 156.2 1.0 7.2e-46 155.7 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF21 CBS PF00571.23 gi|407464480|ref|YP_006775362.1| - 3.3e-18 65.2 0.2 1.9e-09 37.1 0.1 2.4 2 0 0 2 2 2 2 CBS domain Arch_ATPase PF01637.13 gi|407464480|ref|YP_006775362.1| - 0.15 11.7 4.4 0.23 11.0 3.1 1.4 1 1 0 1 1 1 0 Archaeal ATPase Usp PF00582.21 gi|407464481|ref|YP_006775363.1| - 1.4e-24 86.8 0.0 1.7e-24 86.5 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family DHquinase_II PF01220.14 gi|407464481|ref|YP_006775363.1| - 0.068 12.4 0.1 0.09 12.0 0.0 1.2 1 0 0 1 1 1 0 Dehydroquinase class II HTH_45 PF14947.1 gi|407464482|ref|YP_006775364.1| - 0.0079 15.9 0.3 0.013 15.3 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.1 gi|407464482|ref|YP_006775364.1| - 0.041 13.4 0.3 0.063 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4364) DUF3116 PF11313.3 gi|407464482|ref|YP_006775364.1| - 0.082 12.5 0.3 0.2 11.2 0.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3116) Na_Ca_ex PF01699.19 gi|407464483|ref|YP_006775365.1| - 1e-45 154.8 35.6 3e-25 88.4 11.5 2.2 2 0 0 2 2 2 2 Sodium/calcium exchanger protein PmbA_TldD PF01523.11 gi|407464484|ref|YP_006775366.1| - 7.8e-51 173.0 0.4 1e-50 172.6 0.2 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Radical_SAM PF04055.16 gi|407464485|ref|YP_006775367.1| - 7.9e-20 71.6 0.5 1.4e-19 70.8 0.2 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Radical_SAM PF04055.16 gi|407464486|ref|YP_006775368.1| - 1.3e-12 48.2 0.0 2.1e-12 47.5 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SpoU_sub_bind PF08032.7 gi|407464486|ref|YP_006775368.1| - 0.044 13.9 0.1 5.8 7.1 0.0 3.0 2 0 0 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding BATS PF06968.8 gi|407464486|ref|YP_006775368.1| - 0.068 13.0 0.1 0.17 11.7 0.0 1.6 1 0 0 1 1 1 0 Biotin and Thiamin Synthesis associated domain Trypsin_2 PF13365.1 gi|407464487|ref|YP_006775369.1| - 2.3e-23 82.4 0.3 4e-23 81.6 0.2 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.21 gi|407464487|ref|YP_006775369.1| - 3.8e-14 52.8 0.2 9.3e-14 51.5 0.1 1.6 1 1 0 1 1 1 1 Trypsin PDZ_2 PF13180.1 gi|407464487|ref|YP_006775369.1| - 1.6e-12 47.1 0.8 4.6e-12 45.6 0.5 1.8 1 0 0 1 1 1 1 PDZ domain Peptidase_S46 PF10459.4 gi|407464487|ref|YP_006775369.1| - 0.0035 15.8 1.1 0.018 13.5 0.2 1.9 2 0 0 2 2 2 1 Peptidase S46 Peptidase_S29 PF02907.10 gi|407464487|ref|YP_006775369.1| - 0.0056 16.2 0.1 0.011 15.2 0.0 1.5 1 0 0 1 1 1 1 Hepatitis C virus NS3 protease Peptidase_S32 PF05579.8 gi|407464487|ref|YP_006775369.1| - 0.015 14.2 2.2 1.3 7.9 0.1 2.2 2 0 0 2 2 2 0 Equine arteritis virus serine endopeptidase S32 PDZ PF00595.19 gi|407464487|ref|YP_006775369.1| - 0.019 15.1 4.6 1.8 8.7 0.0 3.1 3 0 0 3 3 3 0 PDZ domain (Also known as DHR or GLGF) Peptidase_S7 PF00949.16 gi|407464487|ref|YP_006775369.1| - 0.054 12.8 0.2 0.14 11.5 0.1 1.6 1 1 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease DUF31 PF01732.11 gi|407464487|ref|YP_006775369.1| - 2.8 7.1 5.5 21 4.2 0.1 2.9 2 1 1 3 3 3 0 Putative peptidase (DUF31) Glycos_transf_2 PF00535.21 gi|407464488|ref|YP_006775370.1| - 3.8e-30 104.7 0.0 5.1e-30 104.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|407464488|ref|YP_006775370.1| - 1.3e-17 64.3 0.0 1.9e-17 63.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|407464488|ref|YP_006775370.1| - 1.4e-10 40.7 0.0 2.7e-10 39.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.4 gi|407464488|ref|YP_006775370.1| - 6.1e-08 32.0 0.0 8.5e-08 31.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|407464488|ref|YP_006775370.1| - 0.00021 21.5 0.0 0.00035 20.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Polyketide_cyc2 PF10604.4 gi|407464489|ref|YP_006775371.1| - 2.1e-09 37.6 0.0 2.3e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.15 gi|407464489|ref|YP_006775371.1| - 5.1e-07 29.7 0.1 7.2e-07 29.2 0.0 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Lipocalin PF00061.18 gi|407464489|ref|YP_006775371.1| - 0.05 13.5 0.8 0.061 13.3 0.5 1.3 1 0 0 1 1 1 0 Lipocalin / cytosolic fatty-acid binding protein family COXG PF06240.8 gi|407464489|ref|YP_006775371.1| - 0.07 12.7 1.6 0.3 10.7 1.1 1.8 1 1 0 1 1 1 0 Carbon monoxide dehydrogenase subunit G (CoxG) tRNA_bind PF01588.15 gi|407464491|ref|YP_006775373.1| - 4.9e-21 74.3 0.0 5.5e-21 74.2 0.0 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain TBP PF00352.16 gi|407464492|ref|YP_006775374.1| - 7.6e-61 201.4 0.0 6.7e-30 102.2 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|407464492|ref|YP_006775374.1| - 3.4e-07 30.2 0.0 0.0003 20.7 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) Arfaptin PF06456.8 gi|407464492|ref|YP_006775374.1| - 0.09 12.1 0.2 0.77 9.0 0.0 2.0 2 0 0 2 2 2 0 Arfaptin-like domain DUF1512 PF07431.7 gi|407464493|ref|YP_006775375.1| - 7.2e-98 327.6 5.6 8.4e-98 327.3 3.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1512) CcmH PF03918.9 gi|407464493|ref|YP_006775375.1| - 0.0014 17.6 0.1 0.98 8.4 0.0 2.3 2 0 0 2 2 2 2 Cytochrome C biogenesis protein DnaJ_CXXCXGXG PF00684.14 gi|407464494|ref|YP_006775376.1| - 0.0029 17.6 1.0 0.0038 17.2 0.7 1.2 1 0 0 1 1 1 1 DnaJ central domain Fer4_2 PF12797.2 gi|407464494|ref|YP_006775376.1| - 0.035 14.0 1.2 2 8.5 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain OrfB_Zn_ribbon PF07282.6 gi|407464494|ref|YP_006775376.1| - 0.076 12.6 4.1 0.16 11.6 2.8 1.5 1 1 0 1 1 1 0 Putative transposase DNA-binding domain Nop10p PF04135.7 gi|407464494|ref|YP_006775376.1| - 0.077 12.7 2.2 0.17 11.5 0.4 1.9 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family Zn-ribbon_8 PF09723.5 gi|407464494|ref|YP_006775376.1| - 0.089 12.7 2.3 0.89 9.5 1.8 2.0 1 1 1 2 2 2 0 Zinc ribbon domain zf-RanBP PF00641.13 gi|407464494|ref|YP_006775376.1| - 0.094 11.8 5.2 0.19 10.8 0.1 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Med27 PF11571.3 gi|407464494|ref|YP_006775376.1| - 0.12 12.5 1.6 3.9 7.6 0.2 2.1 2 0 0 2 2 2 0 Mediator complex subunit 27 RecR PF02132.10 gi|407464494|ref|YP_006775376.1| - 0.2 11.1 1.8 0.9 9.0 0.1 2.0 2 0 0 2 2 2 0 RecR protein Nudix_N_2 PF14803.1 gi|407464494|ref|YP_006775376.1| - 0.22 11.2 1.4 0.52 10.0 0.0 1.9 2 0 0 2 2 2 0 Nudix N-terminal DZR PF12773.2 gi|407464494|ref|YP_006775376.1| - 0.26 11.1 2.0 0.51 10.1 1.4 1.5 1 1 0 1 1 1 0 Double zinc ribbon zf-tcix PF14952.1 gi|407464494|ref|YP_006775376.1| - 3.9 6.8 6.1 0.28 10.5 0.6 1.8 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Auto_anti-p27 PF06677.7 gi|407464495|ref|YP_006775377.1| - 0.0002 21.0 1.5 0.00023 20.8 1.1 1.2 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-TFIIB PF13453.1 gi|407464495|ref|YP_006775377.1| - 0.0011 18.1 1.8 0.051 12.7 0.1 2.1 2 0 0 2 2 2 1 Transcription factor zinc-finger zf-C4_Topoisom PF01396.14 gi|407464495|ref|YP_006775377.1| - 0.0014 18.1 1.9 0.018 14.5 0.1 2.1 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger zf-ISL3 PF14690.1 gi|407464495|ref|YP_006775377.1| - 0.0015 18.4 4.2 0.007 16.3 0.1 2.0 1 1 1 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RNA_POL_M_15KD PF02150.11 gi|407464495|ref|YP_006775377.1| - 0.0025 17.4 4.5 0.27 10.9 2.7 2.1 1 1 1 2 2 2 2 RNA polymerases M/15 Kd subunit DNA_ligase_ZBD PF03119.11 gi|407464495|ref|YP_006775377.1| - 0.0029 17.2 0.1 0.0058 16.2 0.0 1.5 1 1 0 1 1 1 1 NAD-dependent DNA ligase C4 zinc finger domain DUF2296 PF10058.4 gi|407464495|ref|YP_006775377.1| - 0.0032 17.1 1.5 0.0067 16.1 1.0 1.5 1 1 0 1 1 1 1 Predicted integral membrane metal-binding protein (DUF2296) zf-NADH-PPase PF09297.6 gi|407464495|ref|YP_006775377.1| - 0.0077 15.7 1.4 0.029 13.8 0.9 1.7 1 1 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain RecR PF02132.10 gi|407464495|ref|YP_006775377.1| - 0.014 14.8 0.9 0.047 13.1 0.6 1.8 1 1 0 1 1 1 0 RecR protein DUF4379 PF14311.1 gi|407464495|ref|YP_006775377.1| - 0.016 15.0 3.3 0.024 14.4 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4379) IBR PF01485.16 gi|407464495|ref|YP_006775377.1| - 0.019 14.8 0.7 0.021 14.6 0.5 1.1 1 0 0 1 1 1 0 IBR domain Cys_rich_CPCC PF14206.1 gi|407464495|ref|YP_006775377.1| - 0.019 14.5 1.2 0.02 14.4 0.8 1.1 1 0 0 1 1 1 0 Cysteine-rich CPCC DZR PF12773.2 gi|407464495|ref|YP_006775377.1| - 0.021 14.6 1.7 0.044 13.6 1.2 1.6 1 1 0 1 1 1 0 Double zinc ribbon zf-RING_3 PF14369.1 gi|407464495|ref|YP_006775377.1| - 0.033 14.1 3.5 1.4 8.9 0.1 2.1 1 1 1 2 2 2 0 zinc-finger OrfB_Zn_ribbon PF07282.6 gi|407464495|ref|YP_006775377.1| - 0.051 13.2 1.0 0.059 13.0 0.7 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc-ribbons_6 PF07191.7 gi|407464495|ref|YP_006775377.1| - 0.053 13.3 0.4 0.065 13.0 0.3 1.2 1 0 0 1 1 1 0 zinc-ribbons zf-IS66 PF13005.2 gi|407464495|ref|YP_006775377.1| - 0.053 13.5 3.4 0.053 13.5 0.2 2.0 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-B_box PF00643.19 gi|407464495|ref|YP_006775377.1| - 0.063 13.1 1.0 0.16 11.8 0.7 1.7 1 1 0 1 1 1 0 B-box zinc finger zf-RanBP PF00641.13 gi|407464495|ref|YP_006775377.1| - 0.077 12.1 4.0 0.29 10.2 0.4 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others PhnA_Zn_Ribbon PF08274.7 gi|407464495|ref|YP_006775377.1| - 0.08 12.7 1.8 6.6 6.6 0.1 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Lar_restr_allev PF14354.1 gi|407464495|ref|YP_006775377.1| - 0.098 12.9 4.7 0.19 12.0 3.2 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.1 gi|407464495|ref|YP_006775377.1| - 0.11 11.9 5.4 1.3 8.5 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin PF00301.15 gi|407464495|ref|YP_006775377.1| - 0.14 12.0 7.2 5.9 6.8 4.9 2.1 1 1 1 2 2 2 0 Rubredoxin zf-LITAF-like PF10601.4 gi|407464495|ref|YP_006775377.1| - 0.15 11.9 1.8 3.7 7.4 0.1 2.0 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain Zn-ribbon_8 PF09723.5 gi|407464495|ref|YP_006775377.1| - 0.16 11.9 4.2 1.1 9.3 0.4 2.1 1 1 1 2 2 2 0 Zinc ribbon domain PADR1 PF08063.7 gi|407464495|ref|YP_006775377.1| - 0.19 11.1 2.7 0.29 10.5 0.3 1.9 1 1 1 2 2 2 0 PADR1 (NUC008) domain zf-met PF12874.2 gi|407464495|ref|YP_006775377.1| - 0.21 11.8 1.3 0.34 11.1 0.9 1.4 1 0 0 1 1 1 0 Zinc-finger of C2H2 type VP_N-CPKC PF11475.3 gi|407464495|ref|YP_006775377.1| - 0.27 10.7 1.3 1 8.9 0.0 2.1 2 0 0 2 2 2 0 Virion protein N terminal domain zf-FPG_IleRS PF06827.9 gi|407464495|ref|YP_006775377.1| - 0.34 10.6 6.0 1.9 8.1 4.2 1.9 1 1 0 1 1 1 0 Zinc finger found in FPG and IleRS zf-ribbon_3 PF13248.1 gi|407464495|ref|YP_006775377.1| - 0.35 10.1 5.2 2.4 7.4 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain PHD PF00628.24 gi|407464495|ref|YP_006775377.1| - 0.38 10.4 2.7 0.82 9.4 1.8 1.6 1 1 0 1 1 1 0 PHD-finger DUF1936 PF09151.5 gi|407464495|ref|YP_006775377.1| - 0.39 10.2 2.3 3.2 7.3 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) zf-HIT PF04438.11 gi|407464495|ref|YP_006775377.1| - 0.44 10.2 4.1 1.8 8.2 0.1 2.1 2 0 0 2 2 2 0 HIT zinc finger DUF1272 PF06906.6 gi|407464495|ref|YP_006775377.1| - 0.61 9.9 3.8 3.2 7.6 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) zf-C2H2_4 PF13894.1 gi|407464495|ref|YP_006775377.1| - 0.74 10.2 3.2 8.4 6.9 0.0 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger Prim_Zn_Ribbon PF08273.7 gi|407464495|ref|YP_006775377.1| - 1.2 9.2 9.9 8.5 6.5 6.9 1.9 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase zf-tcix PF14952.1 gi|407464495|ref|YP_006775377.1| - 1.3 8.4 6.3 0.3 10.4 0.9 2.0 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Zn_Tnp_IS1595 PF12760.2 gi|407464495|ref|YP_006775377.1| - 1.4 8.8 5.2 18 5.2 3.7 2.0 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zf-C2H2 PF00096.21 gi|407464495|ref|YP_006775377.1| - 1.5 9.3 4.7 15 6.1 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type DUF329 PF03884.9 gi|407464495|ref|YP_006775377.1| - 1.5 8.4 4.3 11 5.6 3.0 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF329) zf-MIZ PF02891.15 gi|407464495|ref|YP_006775377.1| - 1.8 8.1 4.3 5.3 6.6 3.0 1.8 1 1 0 1 1 1 0 MIZ/SP-RING zinc finger zinc_ribbon_4 PF13717.1 gi|407464495|ref|YP_006775377.1| - 2.3 7.9 4.7 14 5.4 0.7 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407464495|ref|YP_006775377.1| - 2.4 7.8 4.9 13 5.5 0.7 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2HC_2 PF13913.1 gi|407464495|ref|YP_006775377.1| - 2.8 7.6 7.1 1.2 8.9 0.9 2.1 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-H2C2_2 PF13465.1 gi|407464495|ref|YP_006775377.1| - 4.7 7.6 8.3 3 8.2 0.6 2.2 1 1 1 2 2 2 0 Zinc-finger double domain Peptidase_M24 PF00557.19 gi|407464496|ref|YP_006775378.1| - 1.5e-39 135.7 0.3 2.6e-39 134.9 0.2 1.4 1 1 0 1 1 1 1 Metallopeptidase family M24 CARD PF00619.16 gi|407464496|ref|YP_006775378.1| - 0.0053 16.5 0.1 0.095 12.5 0.0 2.2 1 1 1 2 2 2 1 Caspase recruitment domain DZR PF12773.2 gi|407464497|ref|YP_006775379.1| - 0.004 16.9 0.9 0.0048 16.6 0.6 1.1 1 0 0 1 1 1 1 Double zinc ribbon zf-C3HC4_3 PF13920.1 gi|407464497|ref|YP_006775379.1| - 0.0041 16.7 0.6 0.0052 16.4 0.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) ATP_synt_I PF03899.10 gi|407464497|ref|YP_006775379.1| - 0.017 15.2 0.3 0.019 15.1 0.2 1.1 1 0 0 1 1 1 0 ATP synthase I chain EpsG PF14897.1 gi|407464497|ref|YP_006775379.1| - 0.025 13.5 0.4 0.027 13.4 0.3 1.1 1 0 0 1 1 1 0 EpsG family DUF2321 PF10083.4 gi|407464497|ref|YP_006775379.1| - 0.074 12.5 0.3 0.084 12.3 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) zf-ribbon_3 PF13248.1 gi|407464497|ref|YP_006775379.1| - 0.083 12.1 0.4 6.2 6.1 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|407464497|ref|YP_006775379.1| - 0.11 12.0 0.5 0.11 12.0 0.3 1.8 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit AA_permease_C PF13906.1 gi|407464497|ref|YP_006775379.1| - 0.56 10.1 3.2 0.76 9.6 2.2 1.2 1 0 0 1 1 1 0 C-terminus of AA_permease DivIC PF04977.10 gi|407464498|ref|YP_006775380.1| - 0.0002 20.7 3.4 0.00034 20.0 2.3 1.4 1 0 0 1 1 1 1 Septum formation initiator CCDC155 PF14662.1 gi|407464498|ref|YP_006775380.1| - 0.00035 20.2 2.0 0.00048 19.7 1.4 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 ATG16 PF08614.6 gi|407464498|ref|YP_006775380.1| - 0.00046 20.0 1.8 0.00052 19.8 1.2 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) Tropomyosin_1 PF12718.2 gi|407464498|ref|YP_006775380.1| - 0.0013 18.6 7.3 0.0013 18.6 5.1 1.7 1 1 1 2 2 2 1 Tropomyosin like IncA PF04156.9 gi|407464498|ref|YP_006775380.1| - 0.0033 17.0 3.3 0.0038 16.8 2.3 1.2 1 0 0 1 1 1 1 IncA protein DUF3287 PF11690.3 gi|407464498|ref|YP_006775380.1| - 0.0037 17.3 0.8 0.56 10.2 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3287) TBPIP PF07106.8 gi|407464498|ref|YP_006775380.1| - 0.019 14.5 5.5 0.029 13.9 3.8 1.2 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) bZIP_2 PF07716.10 gi|407464498|ref|YP_006775380.1| - 0.029 14.2 6.4 0.065 13.0 4.4 1.6 1 0 0 1 1 1 0 Basic region leucine zipper Microtub_assoc PF07989.6 gi|407464498|ref|YP_006775380.1| - 0.041 13.7 5.6 0.06 13.1 3.6 1.5 1 1 0 1 1 1 0 Microtubule associated DUF972 PF06156.8 gi|407464498|ref|YP_006775380.1| - 0.049 13.9 5.6 0.057 13.7 3.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF972) TMF_DNA_bd PF12329.3 gi|407464498|ref|YP_006775380.1| - 0.05 13.4 5.9 0.095 12.5 4.1 1.4 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding IFP_35_N PF07334.8 gi|407464498|ref|YP_006775380.1| - 0.052 13.5 4.2 0.12 12.3 2.9 1.7 1 0 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF4613 PF15390.1 gi|407464498|ref|YP_006775380.1| - 0.052 11.7 1.0 0.058 11.5 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4613) DNA_topoisoIV PF00521.15 gi|407464498|ref|YP_006775380.1| - 0.06 12.1 1.7 0.067 12.0 1.2 1.1 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A bZIP_1 PF00170.16 gi|407464498|ref|YP_006775380.1| - 0.066 13.1 3.8 0.11 12.4 2.6 1.4 1 0 0 1 1 1 0 bZIP transcription factor HALZ PF02183.13 gi|407464498|ref|YP_006775380.1| - 0.07 12.8 2.9 0.16 11.7 2.0 1.6 1 0 0 1 1 1 0 Homeobox associated leucine zipper TPD52 PF04201.10 gi|407464498|ref|YP_006775380.1| - 0.12 12.1 5.5 0.17 11.6 3.6 1.4 1 1 0 1 1 1 0 Tumour protein D52 family Pox_A_type_inc PF04508.7 gi|407464498|ref|YP_006775380.1| - 0.13 12.1 4.2 0.3 10.9 2.4 2.1 1 1 1 2 2 2 0 Viral A-type inclusion protein repeat H-kinase_dim PF02895.9 gi|407464498|ref|YP_006775380.1| - 0.23 11.8 5.0 0.17 12.2 2.0 1.8 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain Spc24 PF08286.6 gi|407464498|ref|YP_006775380.1| - 0.25 11.0 5.5 0.31 10.7 3.4 1.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 SlyX PF04102.7 gi|407464498|ref|YP_006775380.1| - 0.25 11.7 5.8 0.96 9.8 4.2 1.8 1 1 0 1 1 1 0 SlyX DUF1843 PF08898.5 gi|407464498|ref|YP_006775380.1| - 0.26 11.3 2.1 0.47 10.5 1.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1843) Fib_alpha PF08702.5 gi|407464498|ref|YP_006775380.1| - 0.36 10.9 4.6 0.46 10.6 3.2 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4446 PF14584.1 gi|407464498|ref|YP_006775380.1| - 0.4 10.4 6.2 0.29 10.9 2.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Jnk-SapK_ap_N PF09744.4 gi|407464498|ref|YP_006775380.1| - 0.61 10.0 10.9 1.5 8.7 7.5 1.6 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 AAA_23 PF13476.1 gi|407464498|ref|YP_006775380.1| - 2 8.7 8.0 2.4 8.4 5.5 1.1 1 0 0 1 1 1 0 AAA domain APG6 PF04111.7 gi|407464498|ref|YP_006775380.1| - 2.5 7.0 11.4 3.1 6.7 7.8 1.3 1 1 0 1 1 1 0 Autophagy protein Apg6 DUF3552 PF12072.3 gi|407464498|ref|YP_006775380.1| - 3 6.9 10.2 6.8 5.8 5.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) DUF4179 PF13786.1 gi|407464499|ref|YP_006775381.1| - 0.0021 18.2 0.0 0.0089 16.2 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4179) Herpes_UL87 PF03043.9 gi|407464499|ref|YP_006775381.1| - 0.32 9.3 3.3 0.38 9.0 2.0 1.3 1 1 0 1 1 1 0 Herpesvirus UL87 family Rota_NSP4 PF01452.11 gi|407464499|ref|YP_006775381.1| - 1.2 8.4 7.8 2.1 7.6 5.4 1.4 1 0 0 1 1 1 0 Rotavirus non structural protein DUF572 PF04502.8 gi|407464499|ref|YP_006775381.1| - 1.2 8.2 23.1 1.4 8.0 16.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) COPIIcoated_ERV PF07970.7 gi|407464499|ref|YP_006775381.1| - 1.8 8.1 5.4 0.21 11.1 1.1 1.5 2 0 0 2 2 2 0 Endoplasmic reticulum vesicle transporter A2M_N PF01835.14 gi|407464500|ref|YP_006775382.1| - 2.4e-32 111.1 3.5 1.6e-07 31.4 0.0 8.0 7 2 0 7 7 7 6 MG2 domain LTD PF00932.14 gi|407464500|ref|YP_006775382.1| - 2.7e-11 43.5 1.5 1.5e-10 41.1 0.1 2.9 3 0 0 3 3 3 1 Lamin Tail Domain DUF367 PF04034.8 gi|407464501|ref|YP_006775383.1| - 5.9e-38 129.3 0.0 7.9e-38 128.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF367) RLI PF04068.10 gi|407464501|ref|YP_006775383.1| - 1.5e-07 30.8 0.1 2.2e-07 30.3 0.1 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI SBP_bac_5 PF00496.17 gi|407464502|ref|YP_006775384.1| - 2.6e-26 92.3 8.9 2.8e-22 79.0 0.0 3.5 3 1 0 3 3 3 2 Bacterial extracellular solute-binding proteins, family 5 Middle Mrr_cat PF04471.7 gi|407464503|ref|YP_006775385.1| - 0.00081 19.1 0.0 0.0013 18.4 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease Hjc PF01870.13 gi|407464503|ref|YP_006775385.1| - 0.0027 17.2 0.1 0.0046 16.5 0.0 1.4 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) NERD PF08378.6 gi|407464503|ref|YP_006775385.1| - 0.0093 16.2 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 1 Nuclease-related domain DUF2070 PF09843.4 gi|407464504|ref|YP_006775386.1| - 1.3e-45 155.0 0.0 2e-45 154.4 0.0 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) TraG-D_C PF12696.2 gi|407464504|ref|YP_006775386.1| - 0.018 14.9 0.0 0.048 13.5 0.0 1.6 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG Sec61_beta PF03911.11 gi|407464505|ref|YP_006775387.1| - 1.3e-14 53.6 0.3 1.5e-14 53.4 0.2 1.1 1 0 0 1 1 1 1 Sec61beta family Auto_anti-p27 PF06677.7 gi|407464506|ref|YP_006775388.1| - 4.5e-10 39.1 3.0 6.9e-10 38.5 2.1 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF1178 PF06676.6 gi|407464506|ref|YP_006775388.1| - 0.022 14.9 1.3 0.025 14.7 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) Mit_KHE1 PF10173.4 gi|407464506|ref|YP_006775388.1| - 0.03 14.1 0.1 0.036 13.9 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related PADR1 PF08063.7 gi|407464506|ref|YP_006775388.1| - 0.13 11.6 0.4 0.2 11.0 0.3 1.4 1 0 0 1 1 1 0 PADR1 (NUC008) domain TIP120 PF08623.5 gi|407464506|ref|YP_006775388.1| - 0.13 11.8 2.4 0.15 11.6 1.7 1.1 1 0 0 1 1 1 0 TATA-binding protein interacting (TIP20) DUF2813 PF11398.3 gi|407464506|ref|YP_006775388.1| - 0.26 10.3 3.5 0.3 10.1 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) DUF3160 PF11369.3 gi|407464506|ref|YP_006775388.1| - 0.32 9.2 4.2 0.36 9.1 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3160) zf-C4pol PF14260.1 gi|407464506|ref|YP_006775388.1| - 0.51 10.3 3.9 2 8.4 2.3 2.0 1 1 1 2 2 2 0 C4-type zinc-finger of DNA polymerase delta SUI1 PF01253.17 gi|407464507|ref|YP_006775389.1| - 1.2e-21 76.2 0.3 1.5e-21 75.9 0.2 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Abi PF02517.11 gi|407464508|ref|YP_006775390.1| - 2e-09 37.4 22.0 1.8e-08 34.3 15.2 2.6 1 1 0 1 1 1 1 CAAX protease self-immunity TFIIB PF00382.14 gi|407464509|ref|YP_006775391.1| - 2.4e-37 126.5 5.0 5.1e-18 64.6 0.7 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|407464509|ref|YP_006775391.1| - 3.7e-13 48.5 2.8 6.1e-13 47.8 2.0 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding zf-ribbon_3 PF13248.1 gi|407464509|ref|YP_006775391.1| - 0.00011 21.2 3.4 0.00021 20.3 2.3 1.5 1 0 0 1 1 1 1 zinc-ribbon domain Sigma70_r4 PF04545.11 gi|407464509|ref|YP_006775391.1| - 0.0002 20.6 0.0 0.082 12.2 0.0 2.7 2 0 0 2 2 2 1 Sigma-70, region 4 Cyclin_N PF00134.18 gi|407464509|ref|YP_006775391.1| - 0.0016 18.0 0.1 0.026 14.0 0.0 2.1 2 0 0 2 2 2 1 Cyclin, N-terminal domain HTH_AsnC-type PF13404.1 gi|407464509|ref|YP_006775391.1| - 0.0065 15.9 0.1 0.26 10.8 0.0 2.8 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain Cyclin_C PF02984.14 gi|407464509|ref|YP_006775391.1| - 0.0074 16.2 0.0 2.1 8.3 0.0 2.4 2 0 0 2 2 2 1 Cyclin, C-terminal domain Ribosomal_S27 PF01599.14 gi|407464509|ref|YP_006775391.1| - 0.021 14.6 1.7 0.046 13.5 1.2 1.6 1 0 0 1 1 1 0 Ribosomal protein S27a DZR PF12773.2 gi|407464509|ref|YP_006775391.1| - 0.024 14.4 2.5 0.049 13.4 1.8 1.5 1 0 0 1 1 1 0 Double zinc ribbon HTH_23 PF13384.1 gi|407464509|ref|YP_006775391.1| - 0.033 13.8 0.3 0.41 10.3 0.0 2.7 2 1 1 3 3 3 0 Homeodomain-like domain Lar_restr_allev PF14354.1 gi|407464509|ref|YP_006775391.1| - 0.044 14.0 1.4 0.087 13.1 0.5 1.9 2 0 0 2 2 2 0 Restriction alleviation protein Lar LacI PF00356.16 gi|407464509|ref|YP_006775391.1| - 0.13 11.9 1.1 1.6 8.4 0.1 2.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family zinc_ribbon_2 PF13240.1 gi|407464509|ref|YP_006775391.1| - 0.47 10.0 9.5 4.8 6.8 6.6 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zf-FPG_IleRS PF06827.9 gi|407464509|ref|YP_006775391.1| - 1.1 8.9 4.2 3.5 7.3 2.9 1.9 1 1 0 1 1 1 0 Zinc finger found in FPG and IleRS zf-CCHC_5 PF14787.1 gi|407464509|ref|YP_006775391.1| - 4.1 6.9 9.8 0.35 10.3 2.3 2.4 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger zf-NADH-PPase PF09297.6 gi|407464509|ref|YP_006775391.1| - 5.1 6.7 7.7 12 5.5 0.2 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain NOB1_Zn_bind PF08772.6 gi|407464509|ref|YP_006775391.1| - 6.2 6.7 7.1 14 5.6 0.3 2.6 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like CofC PF01983.11 gi|407464510|ref|YP_006775392.1| - 3.3e-21 75.2 5.7 4.3e-21 74.8 3.9 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.2 gi|407464510|ref|YP_006775392.1| - 0.00091 19.3 0.0 0.001 19.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain UPF0052 PF01933.13 gi|407464511|ref|YP_006775393.1| - 4.1e-49 167.5 0.0 5.3e-49 167.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 Methyltransf_23 PF13489.1 gi|407464513|ref|YP_006775395.1| - 2.5e-21 76.0 0.0 3.1e-21 75.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|407464513|ref|YP_006775395.1| - 7.2e-21 74.3 0.5 9.3e-21 74.0 0.4 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|407464513|ref|YP_006775395.1| - 2.4e-19 69.6 0.0 5.7e-19 68.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407464513|ref|YP_006775395.1| - 1.5e-14 54.2 0.0 2.5e-14 53.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|407464513|ref|YP_006775395.1| - 2e-13 50.9 0.0 4.1e-13 49.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|407464513|ref|YP_006775395.1| - 2.9e-12 46.8 0.0 7.2e-12 45.5 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_9 PF08003.6 gi|407464513|ref|YP_006775395.1| - 9.6e-10 37.6 0.1 1.5e-09 36.9 0.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) NodS PF05401.6 gi|407464513|ref|YP_006775395.1| - 1e-09 38.1 0.0 1.2e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_4 PF02390.12 gi|407464513|ref|YP_006775395.1| - 6.8e-08 31.7 0.6 8.5e-06 24.9 0.0 2.2 2 0 0 2 2 2 1 Putative methyltransferase Ubie_methyltran PF01209.13 gi|407464513|ref|YP_006775395.1| - 4.1e-07 29.3 1.8 1e-06 28.0 0.1 1.9 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family MTS PF05175.9 gi|407464513|ref|YP_006775395.1| - 2.6e-06 26.9 0.0 3.6e-06 26.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain DOT1 PF08123.8 gi|407464513|ref|YP_006775395.1| - 4.5e-06 26.1 0.4 3.5e-05 23.2 0.1 2.2 1 1 0 1 1 1 1 Histone methylation protein DOT1 CMAS PF02353.15 gi|407464513|ref|YP_006775395.1| - 0.0001 21.5 0.7 0.00014 21.0 0.5 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.7 gi|407464513|ref|YP_006775395.1| - 0.00016 21.0 0.1 0.0014 18.0 0.0 2.0 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW GidB PF02527.10 gi|407464513|ref|YP_006775395.1| - 0.00023 20.3 0.0 0.00034 19.8 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G AdoMet_MTase PF07757.8 gi|407464513|ref|YP_006775395.1| - 0.00026 21.0 0.0 0.00069 19.7 0.0 1.8 1 0 0 1 1 1 1 Predicted AdoMet-dependent methyltransferase Methyltransf_26 PF13659.1 gi|407464513|ref|YP_006775395.1| - 0.00094 19.2 0.0 0.0024 17.8 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|407464513|ref|YP_006775395.1| - 0.0028 16.8 0.0 0.0033 16.6 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_32 PF13679.1 gi|407464513|ref|YP_006775395.1| - 0.0028 17.3 0.0 0.0045 16.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|407464513|ref|YP_006775395.1| - 0.0054 16.2 0.0 0.0095 15.4 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DREV PF05219.7 gi|407464513|ref|YP_006775395.1| - 0.021 13.6 0.1 0.029 13.2 0.0 1.4 1 1 0 1 1 1 0 DREV methyltransferase Methyltransf_2 PF00891.13 gi|407464513|ref|YP_006775395.1| - 0.048 12.8 0.4 0.21 10.7 0.0 2.1 2 1 0 2 2 2 0 O-methyltransferase APCDDC PF14921.1 gi|407464513|ref|YP_006775395.1| - 0.58 9.4 4.9 2 7.7 0.7 2.1 1 1 1 2 2 2 0 Adenomatosis polyposis coli down-regulated 1 DUF241 PF03087.9 gi|407464513|ref|YP_006775395.1| - 2.4 7.5 8.7 0.067 12.6 0.9 1.8 2 0 0 2 2 2 0 Arabidopsis protein of unknown function DUF4363 PF14276.1 gi|407464514|ref|YP_006775396.1| - 0.00012 21.7 2.8 0.019 14.6 0.0 3.3 3 0 0 3 3 3 2 Domain of unknown function (DUF4363) FlgD_ig PF13860.1 gi|407464514|ref|YP_006775396.1| - 0.024 14.3 0.0 0.13 12.0 0.0 2.2 2 0 0 2 2 2 0 FlgD Ig-like domain FAD_oxidored PF12831.2 gi|407464515|ref|YP_006775397.1| - 8.6e-17 61.3 0.0 1.4e-16 60.6 0.0 1.4 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.19 gi|407464515|ref|YP_006775397.1| - 4.9e-14 52.0 0.6 9.2e-08 31.3 0.2 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Trp_halogenase PF04820.9 gi|407464515|ref|YP_006775397.1| - 1.7e-11 43.4 0.1 7.2e-06 24.8 0.0 2.1 1 1 1 2 2 2 2 Tryptophan halogenase FAD_binding_2 PF00890.19 gi|407464515|ref|YP_006775397.1| - 2.3e-11 43.2 0.6 3.5e-08 32.7 0.2 2.1 2 0 0 2 2 2 2 FAD binding domain FAD_binding_3 PF01494.14 gi|407464515|ref|YP_006775397.1| - 4.6e-11 42.3 0.1 9.7e-10 38.0 0.1 2.2 1 1 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|407464515|ref|YP_006775397.1| - 8.8e-10 37.6 0.6 3.8e-08 32.2 0.2 2.1 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.9 gi|407464515|ref|YP_006775397.1| - 1.4e-09 38.1 0.0 3.7e-09 36.7 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|407464515|ref|YP_006775397.1| - 5.4e-08 32.0 1.7 1.8e-07 30.4 0.4 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A Thi4 PF01946.12 gi|407464515|ref|YP_006775397.1| - 1e-06 28.0 4.4 1.2e-05 24.4 3.1 2.3 1 1 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.1 gi|407464515|ref|YP_006775397.1| - 1e-06 28.6 0.0 2.1e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.7 gi|407464515|ref|YP_006775397.1| - 1.8e-06 27.1 0.0 2.6e-06 26.6 0.0 1.4 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_3 PF13738.1 gi|407464515|ref|YP_006775397.1| - 2e-06 28.0 0.1 2.9e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|407464515|ref|YP_006775397.1| - 2e-05 24.9 1.1 0.0064 16.8 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|407464515|ref|YP_006775397.1| - 0.011 15.4 0.0 0.017 14.7 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.16 gi|407464515|ref|YP_006775397.1| - 0.012 15.2 0.0 0.022 14.3 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DUF3797 PF12677.2 gi|407464516|ref|YP_006775398.1| - 0.005 16.4 0.1 0.007 15.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3797) RAG1 PF12940.2 gi|407464516|ref|YP_006775398.1| - 0.018 13.3 0.1 0.02 13.2 0.1 1.0 1 0 0 1 1 1 0 Recombination-activation protein 1 (RAG1) zf-Mss51 PF13824.1 gi|407464516|ref|YP_006775398.1| - 0.053 13.3 0.9 0.071 12.9 0.5 1.4 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-ribbon_3 PF13248.1 gi|407464516|ref|YP_006775398.1| - 0.057 12.6 0.8 0.11 11.6 0.5 1.6 1 1 0 1 1 1 0 zinc-ribbon domain GFA PF04828.9 gi|407464516|ref|YP_006775398.1| - 0.14 12.1 0.6 1.3 9.0 0.1 2.0 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-ISL3 PF14690.1 gi|407464516|ref|YP_006775398.1| - 0.18 11.8 1.2 0.65 10.0 0.8 2.0 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF1451 PF07295.6 gi|407464516|ref|YP_006775398.1| - 0.29 10.8 2.2 1.4 8.6 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1451) zf-C2H2 PF00096.21 gi|407464516|ref|YP_006775398.1| - 0.51 10.8 0.4 0.51 10.8 0.2 2.1 2 0 0 2 2 2 0 Zinc finger, C2H2 type DUF3782 PF12644.2 gi|407464517|ref|YP_006775399.1| - 0.37 10.5 2.0 0.64 9.8 1.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3782) adh_short_C2 PF13561.1 gi|407464518|ref|YP_006775400.1| - 2.2e-40 138.9 0.5 2.6e-40 138.6 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.20 gi|407464518|ref|YP_006775400.1| - 6.7e-33 113.9 0.3 8.5e-33 113.6 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|407464518|ref|YP_006775400.1| - 1.3e-10 41.2 0.3 1.8e-10 40.8 0.2 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.1 gi|407464518|ref|YP_006775400.1| - 2.8e-07 30.7 0.1 4.1e-07 30.1 0.1 1.2 1 0 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 gi|407464518|ref|YP_006775400.1| - 5.9e-07 29.1 0.1 1e-06 28.3 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.13 gi|407464518|ref|YP_006775400.1| - 0.0006 19.5 0.2 0.0011 18.6 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DFP PF04127.10 gi|407464518|ref|YP_006775400.1| - 0.00084 18.9 0.5 0.0013 18.3 0.4 1.2 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein F420_oxidored PF03807.12 gi|407464518|ref|YP_006775400.1| - 0.002 18.5 0.9 0.0038 17.6 0.6 1.7 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NmrA PF05368.8 gi|407464518|ref|YP_006775400.1| - 0.0055 15.9 0.2 0.013 14.7 0.1 1.6 2 0 0 2 2 2 1 NmrA-like family DUF1776 PF08643.5 gi|407464518|ref|YP_006775400.1| - 0.014 14.5 0.0 0.02 14.0 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Polysacc_synt_2 PF02719.10 gi|407464518|ref|YP_006775400.1| - 0.015 14.2 2.1 0.02 13.8 1.5 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|407464518|ref|YP_006775400.1| - 0.029 13.0 0.4 0.04 12.6 0.3 1.4 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family TrkA_N PF02254.13 gi|407464518|ref|YP_006775400.1| - 0.07 13.1 0.2 0.15 12.0 0.1 1.6 1 0 0 1 1 1 0 TrkA-N domain 2-Hacid_dh_C PF02826.14 gi|407464518|ref|YP_006775400.1| - 0.074 12.2 0.1 0.12 11.4 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RmlD_sub_bind PF04321.12 gi|407464518|ref|YP_006775400.1| - 0.086 11.7 0.2 0.22 10.3 0.0 1.8 2 0 0 2 2 2 0 RmlD substrate binding domain NAD_binding_2 PF03446.10 gi|407464519|ref|YP_006775401.1| - 2.2e-40 138.1 0.4 3.9e-40 137.3 0.2 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.1 gi|407464519|ref|YP_006775401.1| - 2.5e-21 75.9 0.1 4.3e-21 75.2 0.1 1.4 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.12 gi|407464519|ref|YP_006775401.1| - 2e-09 37.7 1.0 4.4e-09 36.6 0.3 1.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|407464519|ref|YP_006775401.1| - 1.6e-08 33.9 0.1 2.5e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.18 gi|407464519|ref|YP_006775401.1| - 2.3e-06 27.3 0.2 5e-05 23.0 0.1 2.4 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Shikimate_DH PF01488.15 gi|407464519|ref|YP_006775401.1| - 8.4e-06 25.9 0.3 1.5e-05 25.1 0.2 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.7 gi|407464519|ref|YP_006775401.1| - 6.8e-05 22.2 0.2 0.00018 20.9 0.1 1.7 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain ApbA PF02558.11 gi|407464519|ref|YP_006775401.1| - 8.1e-05 22.1 0.1 0.00017 21.0 0.1 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.9 gi|407464519|ref|YP_006775401.1| - 0.0025 17.2 0.3 0.049 13.0 0.0 2.6 2 1 1 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.13 gi|407464519|ref|YP_006775401.1| - 0.0055 16.3 0.1 0.01 15.4 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rossmann-like PF10727.4 gi|407464519|ref|YP_006775401.1| - 0.02 14.6 0.0 0.056 13.1 0.0 1.7 2 0 0 2 2 2 0 Rossmann-like domain TrkA_N PF02254.13 gi|407464519|ref|YP_006775401.1| - 0.028 14.4 0.4 0.2 11.6 0.1 2.4 1 1 1 2 2 2 0 TrkA-N domain NmrA PF05368.8 gi|407464519|ref|YP_006775401.1| - 0.039 13.2 0.0 0.07 12.3 0.0 1.4 1 0 0 1 1 1 0 NmrA-like family NAD_binding_10 PF13460.1 gi|407464519|ref|YP_006775401.1| - 0.042 13.8 0.0 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 NADH(P)-binding zf-C2H2 PF00096.21 gi|407464521|ref|YP_006775403.1| - 0.003 17.8 0.9 0.003 17.8 0.6 1.9 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-H2C2_5 PF13909.1 gi|407464521|ref|YP_006775403.1| - 0.017 15.3 2.7 0.018 15.2 0.9 1.8 2 0 0 2 2 2 0 C2H2-type zinc-finger domain zf-C2H2_4 PF13894.1 gi|407464521|ref|YP_006775403.1| - 0.036 14.3 1.0 0.036 14.3 0.7 1.8 2 0 0 2 2 2 0 C2H2-type zinc finger zf-UBP PF02148.14 gi|407464521|ref|YP_006775403.1| - 0.11 12.6 0.3 0.18 11.9 0.2 1.4 1 0 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein Herpes_UL52 PF03121.10 gi|407464522|ref|YP_006775404.1| - 0.084 12.6 0.2 0.15 11.8 0.1 1.4 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase zf-C2H2_4 PF13894.1 gi|407464523|ref|YP_006775405.1| - 0.0012 18.9 0.6 0.043 14.1 0.1 2.4 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.3 gi|407464523|ref|YP_006775405.1| - 0.082 13.0 0.9 0.082 13.0 0.7 2.6 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding DUF951 PF06107.6 gi|407464523|ref|YP_006775405.1| - 0.14 11.7 0.5 0.26 10.8 0.1 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) zf-C2H2 PF00096.21 gi|407464523|ref|YP_006775405.1| - 0.19 12.1 0.3 0.19 12.1 0.2 2.7 3 1 0 3 3 3 0 Zinc finger, C2H2 type DUF1660 PF07874.6 gi|407464523|ref|YP_006775405.1| - 0.24 11.7 2.1 1.8 8.8 1.5 2.1 1 1 0 1 1 1 0 Prophage protein (DUF1660) Thioredoxin_4 PF13462.1 gi|407464524|ref|YP_006775406.1| - 2.1e-38 131.8 0.0 2.6e-38 131.6 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.15 gi|407464524|ref|YP_006775406.1| - 3.7e-13 49.4 1.2 1.8e-11 43.9 0.0 2.1 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.1 gi|407464524|ref|YP_006775406.1| - 1.1e-06 28.7 0.0 2.1e-06 27.8 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_5 PF13743.1 gi|407464524|ref|YP_006775406.1| - 4.8e-06 26.2 0.0 6.7e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.1 gi|407464524|ref|YP_006775406.1| - 0.0076 16.3 0.1 0.1 12.7 0.1 2.2 1 1 0 1 1 1 1 Thioredoxin-like DUF3735 PF12537.3 gi|407464524|ref|YP_006775406.1| - 0.054 13.5 0.6 0.13 12.2 0.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3735) Ephrin_lbd PF01404.14 gi|407464524|ref|YP_006775406.1| - 0.1 12.3 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Ephrin receptor ligand binding domain DUF1049 PF06305.6 gi|407464525|ref|YP_006775407.1| - 1 8.8 10.4 0.13 11.7 0.5 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1049) DUF3165 PF11364.3 gi|407464525|ref|YP_006775407.1| - 1.4 9.1 9.0 3.4 7.8 3.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3165) Exosortase_EpsH PF09721.5 gi|407464527|ref|YP_006775409.1| - 5.3e-09 35.6 17.4 7.4e-09 35.2 12.1 1.1 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) DUF998 PF06197.8 gi|407464527|ref|YP_006775409.1| - 0.57 9.4 16.3 0.53 9.5 8.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF998) MerC PF03203.9 gi|407464527|ref|YP_006775409.1| - 1.4 9.2 7.9 1.3 9.3 1.4 2.4 2 1 0 2 2 2 0 MerC mercury resistance protein IMS PF00817.15 gi|407464528|ref|YP_006775410.1| - 5.8e-41 139.7 0.1 3.3e-39 134.0 0.0 2.1 2 0 0 2 2 2 1 impB/mucB/samB family IMS_C PF11799.3 gi|407464528|ref|YP_006775410.1| - 4.9e-16 58.8 1.1 8.6e-16 58.0 0.8 1.4 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.3 gi|407464528|ref|YP_006775410.1| - 2.9e-06 27.0 0.0 8.5e-06 25.5 0.0 1.9 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.1 gi|407464528|ref|YP_006775410.1| - 0.00054 20.0 0.0 0.0016 18.5 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix domain Cdd1 PF11731.3 gi|407464528|ref|YP_006775410.1| - 0.0053 16.6 0.0 0.04 13.8 0.0 2.3 2 0 0 2 2 2 1 Pathogenicity locus DNA_pol_lambd_f PF10391.4 gi|407464528|ref|YP_006775410.1| - 0.0071 15.8 0.0 0.025 14.1 0.0 1.9 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda TfoX_C PF04994.8 gi|407464528|ref|YP_006775410.1| - 0.085 12.7 0.3 6.3 6.7 0.1 3.1 3 0 0 3 3 3 0 TfoX C-terminal domain BRICHOS PF04089.9 gi|407464528|ref|YP_006775410.1| - 0.12 12.2 0.6 0.67 9.8 0.1 2.5 2 1 0 2 2 2 0 BRICHOS domain Syntaxin_2 PF14523.1 gi|407464528|ref|YP_006775410.1| - 0.15 12.0 5.2 0.58 10.2 1.6 2.8 2 1 1 3 3 3 0 Syntaxin-like protein Fib_alpha PF08702.5 gi|407464528|ref|YP_006775410.1| - 1.1 9.3 4.9 2.8 8.0 3.4 1.7 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF1577 PF07614.6 gi|407464529|ref|YP_006775411.1| - 0.077 11.8 0.8 0.088 11.7 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1577) Viral_DNA_bi PF02236.12 gi|407464529|ref|YP_006775411.1| - 0.12 12.5 1.2 4.2 7.6 0.1 2.1 1 1 1 2 2 2 0 Viral DNA-binding protein, all alpha domain Alba PF01918.16 gi|407464530|ref|YP_006775412.1| - 1e-10 41.0 0.7 1.4e-10 40.5 0.5 1.2 1 0 0 1 1 1 1 Alba Trypan_PARP PF05887.6 gi|407464530|ref|YP_006775412.1| - 0.0024 17.6 60.1 0.0024 17.6 41.7 2.3 1 1 1 2 2 2 1 Procyclic acidic repetitive protein (PARP) LysE PF01810.13 gi|407464532|ref|YP_006775414.1| - 1.3e-24 86.5 17.5 1.5e-24 86.3 12.1 1.0 1 0 0 1 1 1 1 LysE type translocator PAC2 PF09754.4 gi|407464533|ref|YP_006775415.1| - 2e-22 80.1 0.0 2.3e-22 79.9 0.0 1.0 1 0 0 1 1 1 1 PAC2 family DS PF01916.12 gi|407464534|ref|YP_006775416.1| - 2.8e-73 246.6 0.2 3.2e-73 246.4 0.1 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase NAD_binding_5 PF07994.7 gi|407464535|ref|YP_006775417.1| - 2.9e-41 141.8 0.0 2e-40 139.1 0.0 1.9 1 1 0 1 1 1 1 Myo-inositol-1-phosphate synthase Inos-1-P_synth PF01658.12 gi|407464535|ref|YP_006775417.1| - 5.1e-30 103.5 0.1 1.7e-29 101.8 0.0 1.8 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase AMP-binding_C_2 PF14535.1 gi|407464535|ref|YP_006775417.1| - 0.099 12.7 0.3 2.1 8.4 0.0 2.4 2 0 0 2 2 2 0 AMP-binding enzyme C-terminal domain CN_hydrolase PF00795.17 gi|407464536|ref|YP_006775418.1| - 1.7e-14 53.6 0.0 4.2e-14 52.3 0.0 1.6 1 1 0 1 1 1 1 Carbon-nitrogen hydrolase SMC_N PF02463.14 gi|407464537|ref|YP_006775419.1| - 6.4e-59 198.8 31.1 1.2e-32 112.9 0.1 4.4 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|407464537|ref|YP_006775419.1| - 1e-20 74.9 7.7 1e-20 74.9 5.3 6.8 2 2 4 6 6 4 1 AAA domain SMC_hinge PF06470.8 gi|407464537|ref|YP_006775419.1| - 1e-14 54.5 0.0 3.3e-14 52.8 0.0 2.0 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.1 gi|407464537|ref|YP_006775419.1| - 3.1e-09 37.2 12.3 9.9e-08 32.2 2.3 5.4 2 2 1 4 4 2 2 AAA domain AAA_29 PF13555.1 gi|407464537|ref|YP_006775419.1| - 4.5e-06 26.0 0.0 1.2e-05 24.6 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain Myosin_tail_1 PF01576.14 gi|407464537|ref|YP_006775419.1| - 0.025 12.3 98.3 0.0039 14.9 28.1 4.7 2 2 2 4 4 4 0 Myosin tail AAA_16 PF13191.1 gi|407464537|ref|YP_006775419.1| - 0.22 11.5 0.0 0.22 11.5 0.0 3.7 3 2 0 3 3 3 0 AAA ATPase domain DUF3584 PF12128.3 gi|407464537|ref|YP_006775419.1| - 0.43 7.8 90.1 2.1 5.5 24.9 3.7 2 2 0 2 2 2 0 Protein of unknown function (DUF3584) IncA PF04156.9 gi|407464537|ref|YP_006775419.1| - 0.6 9.6 99.8 0.04 13.5 7.3 7.0 2 2 4 6 6 6 0 IncA protein MscS_porin PF12795.2 gi|407464537|ref|YP_006775419.1| - 0.69 9.1 91.4 0.41 9.9 0.5 6.2 3 2 2 5 5 5 0 Mechanosensitive ion channel porin domain Reo_sigmaC PF04582.7 gi|407464537|ref|YP_006775419.1| - 1.5 7.9 55.4 0.51 9.4 3.8 6.1 2 2 4 6 6 6 0 Reovirus sigma C capsid protein APG6 PF04111.7 gi|407464537|ref|YP_006775419.1| - 3.4 6.6 105.0 0.019 14.0 8.9 7.4 3 2 6 9 9 9 0 Autophagy protein Apg6 AAA_13 PF13166.1 gi|407464537|ref|YP_006775419.1| - 7.8 4.8 113.7 0.015 13.7 19.3 5.8 3 2 2 5 5 5 0 AAA domain ABC_tran PF00005.22 gi|407464538|ref|YP_006775420.1| - 1.2e-33 116.3 0.0 1.8e-33 115.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|407464538|ref|YP_006775420.1| - 1.3e-18 67.0 0.4 2.7e-18 66.0 0.3 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|407464538|ref|YP_006775420.1| - 1.1e-09 38.6 1.3 2.2e-07 31.1 0.9 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|407464538|ref|YP_006775420.1| - 2.5e-06 26.8 0.9 0.007 15.4 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_18 PF13238.1 gi|407464538|ref|YP_006775420.1| - 1.6e-05 25.2 0.1 2.8e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|407464538|ref|YP_006775420.1| - 5.5e-05 23.2 0.0 8.9e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|407464538|ref|YP_006775420.1| - 0.00011 22.4 0.4 0.0023 18.0 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|407464538|ref|YP_006775420.1| - 0.00014 22.6 0.1 0.0023 18.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|407464538|ref|YP_006775420.1| - 0.00016 21.0 0.5 0.00067 18.9 0.4 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|407464538|ref|YP_006775420.1| - 0.0002 20.9 0.5 0.033 13.6 0.1 2.6 1 1 2 3 3 3 1 AAA-like domain AAA_29 PF13555.1 gi|407464538|ref|YP_006775420.1| - 0.00025 20.4 0.1 0.00055 19.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.24 gi|407464538|ref|YP_006775420.1| - 0.00032 20.8 0.5 0.0042 17.2 0.3 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF258 PF03193.11 gi|407464538|ref|YP_006775420.1| - 0.00044 19.4 1.3 0.00057 19.1 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function, DUF258 Zeta_toxin PF06414.7 gi|407464538|ref|YP_006775420.1| - 0.00076 18.6 0.0 0.0016 17.5 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin T2SE PF00437.15 gi|407464538|ref|YP_006775420.1| - 0.00091 18.1 0.0 0.0014 17.5 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_25 PF13481.1 gi|407464538|ref|YP_006775420.1| - 0.0031 16.9 0.0 0.012 14.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain UPF0079 PF02367.12 gi|407464538|ref|YP_006775420.1| - 0.0058 16.2 0.0 0.01 15.4 0.0 1.5 1 0 0 1 1 1 1 Uncharacterised P-loop hydrolase UPF0079 AAA_23 PF13476.1 gi|407464538|ref|YP_006775420.1| - 0.014 15.7 0.9 0.033 14.5 0.6 1.8 1 1 0 1 1 1 0 AAA domain APS_kinase PF01583.15 gi|407464538|ref|YP_006775420.1| - 0.025 14.2 0.0 0.064 12.9 0.0 1.7 2 0 0 2 2 1 0 Adenylylsulphate kinase AAA_33 PF13671.1 gi|407464538|ref|YP_006775420.1| - 0.029 14.2 0.0 0.82 9.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.1 gi|407464538|ref|YP_006775420.1| - 0.044 12.2 0.0 3.2 6.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.21 gi|407464538|ref|YP_006775420.1| - 0.047 13.1 0.0 0.095 12.1 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_19 PF13245.1 gi|407464538|ref|YP_006775420.1| - 0.048 13.4 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain DUF87 PF01935.12 gi|407464538|ref|YP_006775420.1| - 0.054 13.2 0.1 0.12 12.1 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function DUF87 RNA_helicase PF00910.17 gi|407464538|ref|YP_006775420.1| - 0.055 13.6 0.5 0.25 11.5 0.3 2.1 1 1 0 1 1 1 0 RNA helicase Arch_ATPase PF01637.13 gi|407464538|ref|YP_006775420.1| - 0.078 12.6 0.4 0.22 11.1 0.0 1.8 2 0 0 2 2 2 0 Archaeal ATPase NB-ARC PF00931.17 gi|407464538|ref|YP_006775420.1| - 0.084 11.7 0.0 0.13 11.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain ATP-synt_ab PF00006.20 gi|407464538|ref|YP_006775420.1| - 0.12 11.8 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Sigma54_activ_2 PF14532.1 gi|407464538|ref|YP_006775420.1| - 0.12 12.3 0.0 0.51 10.3 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_5 PF07728.9 gi|407464538|ref|YP_006775420.1| - 0.14 11.8 0.1 0.4 10.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Methyltransf_33 PF10017.4 gi|407464539|ref|YP_006775421.1| - 5.3e-45 152.4 1.8 8e-45 151.8 0.4 1.9 2 0 0 2 2 2 1 Histidine-specific methyltransferase, SAM-dependent Methyltransf_25 PF13649.1 gi|407464539|ref|YP_006775421.1| - 0.015 15.6 0.0 0.087 13.2 0.0 2.0 1 1 1 2 2 2 0 Methyltransferase domain Methyltransf_32 PF13679.1 gi|407464539|ref|YP_006775421.1| - 0.11 12.1 0.0 0.23 11.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain FGE-sulfatase PF03781.11 gi|407464540|ref|YP_006775422.1| - 8.8e-49 166.1 2.9 2e-48 165.0 2.0 1.5 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DinB_2 PF12867.2 gi|407464540|ref|YP_006775422.1| - 2.8e-11 43.8 0.0 8.1e-11 42.3 0.0 1.8 2 1 0 2 2 2 1 DinB superfamily Corona_6B_7B PF03262.8 gi|407464540|ref|YP_006775422.1| - 0.01 15.0 0.5 0.021 14.0 0.4 1.4 1 0 0 1 1 1 0 Coronavirus 6B/7B protein DinB PF05163.7 gi|407464540|ref|YP_006775422.1| - 0.075 12.7 0.1 0.24 11.0 0.0 1.8 2 0 0 2 2 2 0 DinB family Nab6_mRNP_bdg PF10567.4 gi|407464540|ref|YP_006775422.1| - 0.082 11.8 0.2 0.29 10.0 0.0 1.7 2 0 0 2 2 2 0 RNA-recognition motif ProRS-C_1 PF09180.6 gi|407464541|ref|YP_006775423.1| - 6.3e-22 77.2 2.0 2.1e-21 75.5 0.4 2.4 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal HGTP_anticodon PF03129.15 gi|407464541|ref|YP_006775423.1| - 4.1e-18 65.1 0.1 1.2e-17 63.6 0.1 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.20 gi|407464541|ref|YP_006775423.1| - 1.1e-16 60.8 0.0 2.4e-16 59.7 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Hydrolase PF00702.21 gi|407464543|ref|YP_006775425.1| - 1.7e-10 41.6 0.1 1e-09 39.1 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|407464543|ref|YP_006775425.1| - 2.6e-07 31.0 0.1 3.5e-07 30.5 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|407464543|ref|YP_006775425.1| - 3.5e-07 30.6 0.0 5.6e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|407464543|ref|YP_006775425.1| - 1.6e-05 24.6 0.0 0.0033 17.0 0.1 2.5 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase F420_ligase PF01996.11 gi|407464544|ref|YP_006775426.1| - 3e-69 232.5 0.2 3.4e-69 232.4 0.2 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase DUF3906 PF13046.1 gi|407464544|ref|YP_006775426.1| - 0.039 13.5 0.1 0.24 11.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3906) tRNA-synt_1d PF00750.14 gi|407464545|ref|YP_006775427.1| - 3e-36 124.9 2.8 1.5e-27 96.3 0.1 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (R) DALR_1 PF05746.10 gi|407464545|ref|YP_006775427.1| - 4.2e-28 97.7 0.7 1.5e-26 92.6 0.0 2.9 3 0 0 3 3 3 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.11 gi|407464545|ref|YP_006775427.1| - 8.1e-15 55.1 0.1 2.3e-14 53.7 0.0 1.8 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.14 gi|407464545|ref|YP_006775427.1| - 0.00022 20.4 0.1 0.00043 19.4 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.6 gi|407464545|ref|YP_006775427.1| - 0.015 13.9 0.1 0.036 12.7 0.1 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (M) Amidase_6 PF12671.2 gi|407464545|ref|YP_006775427.1| - 0.095 12.7 0.2 0.46 10.5 0.0 2.0 2 0 0 2 2 2 0 Putative amidase domain Hydrolase_3 PF08282.7 gi|407464546|ref|YP_006775428.1| - 3.8e-30 105.3 1.2 1.6e-21 77.0 0.1 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.8 gi|407464546|ref|YP_006775428.1| - 6.1e-07 28.9 0.0 0.00053 19.3 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.21 gi|407464546|ref|YP_006775428.1| - 1.5e-05 25.5 0.5 0.038 14.4 0.3 2.7 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.11 gi|407464546|ref|YP_006775428.1| - 6.2e-05 22.0 0.0 0.12 11.2 0.0 2.2 2 0 0 2 2 2 2 Trehalose-phosphatase HAD PF12710.2 gi|407464546|ref|YP_006775428.1| - 0.0001 22.5 0.8 0.014 15.5 0.0 2.5 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|407464546|ref|YP_006775428.1| - 0.023 14.4 0.0 0.051 13.3 0.0 1.5 1 0 0 1 1 1 0 HAD-hyrolase-like Hydrolase_6 PF13344.1 gi|407464546|ref|YP_006775428.1| - 0.062 13.1 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase RRM_4 PF10598.4 gi|407464546|ref|YP_006775428.1| - 0.12 12.2 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif of the spliceosomal PrP8 TGS PF02824.16 gi|407464547|ref|YP_006775429.1| - 6.5e-21 73.9 0.0 1.9e-20 72.4 0.0 1.9 1 0 0 1 1 1 1 TGS domain MMR_HSR1 PF01926.18 gi|407464547|ref|YP_006775429.1| - 1.8e-19 69.7 0.6 5.8e-19 68.1 0.2 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|407464547|ref|YP_006775429.1| - 2.1e-16 59.5 3.0 8.2e-14 51.1 0.1 2.4 2 0 0 2 2 2 2 Ferrous iron transport protein B AIG1 PF04548.11 gi|407464547|ref|YP_006775429.1| - 0.0014 17.7 0.0 0.0028 16.7 0.0 1.5 1 0 0 1 1 1 1 AIG1 family DUF258 PF03193.11 gi|407464547|ref|YP_006775429.1| - 0.0042 16.3 0.5 0.016 14.4 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function, DUF258 Arf PF00025.16 gi|407464547|ref|YP_006775429.1| - 0.0056 15.9 3.2 0.072 12.3 0.1 2.6 2 1 0 2 2 2 1 ADP-ribosylation factor family ArgK PF03308.11 gi|407464547|ref|YP_006775429.1| - 0.0095 14.7 0.3 0.16 10.6 0.0 2.3 2 0 0 2 2 2 1 ArgK protein Miro PF08477.8 gi|407464547|ref|YP_006775429.1| - 0.012 16.0 0.0 0.033 14.6 0.0 1.8 1 0 0 1 1 1 0 Miro-like protein cobW PF02492.14 gi|407464547|ref|YP_006775429.1| - 0.027 13.9 3.1 0.4 10.0 0.1 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SRPRB PF09439.5 gi|407464547|ref|YP_006775429.1| - 0.038 13.2 0.1 0.038 13.2 0.1 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Dynamin_N PF00350.18 gi|407464547|ref|YP_006775429.1| - 0.052 13.3 8.0 0.31 10.8 0.3 2.9 4 0 0 4 4 4 0 Dynamin family AAA_22 PF13401.1 gi|407464547|ref|YP_006775429.1| - 0.058 13.5 0.5 4.1 7.5 0.0 2.7 2 2 0 2 2 2 0 AAA domain Ras PF00071.17 gi|407464547|ref|YP_006775429.1| - 0.076 12.4 1.2 7.6 5.8 0.1 2.3 2 0 0 2 2 2 0 Ras family DUF1883 PF08980.5 gi|407464547|ref|YP_006775429.1| - 0.11 12.0 0.0 0.29 10.7 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1883) AAA_28 PF13521.1 gi|407464547|ref|YP_006775429.1| - 0.15 11.9 0.2 0.32 10.9 0.1 1.6 1 0 0 1 1 1 0 AAA domain DUF1932 PF09130.6 gi|407464548|ref|YP_006775430.1| - 0.18 11.5 8.1 4.1 7.1 1.2 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF1932) Collagen PF01391.13 gi|407464549|ref|YP_006775431.1| - 4.8e-59 195.7 230.7 7.4e-09 35.0 24.3 7.7 1 1 3 4 4 4 3 Collagen triple helix repeat (20 copies) TPR_1 PF00515.23 gi|407464550|ref|YP_006775432.1| - 2.8e-26 90.0 10.2 9.2e-09 34.5 0.1 5.3 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407464550|ref|YP_006775432.1| - 8.8e-26 87.7 10.7 1.2e-07 31.0 0.1 5.5 6 0 0 6 6 5 4 Tetratricopeptide repeat TPR_11 PF13414.1 gi|407464550|ref|YP_006775432.1| - 9.8e-26 89.2 6.4 1.4e-12 47.0 0.3 3.0 3 0 0 3 3 3 2 TPR repeat TPR_16 PF13432.1 gi|407464550|ref|YP_006775432.1| - 4.7e-19 68.5 1.0 1.5e-09 38.2 0.0 3.0 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407464550|ref|YP_006775432.1| - 2.6e-15 55.2 2.5 0.00037 20.4 0.1 3.9 4 0 0 4 4 3 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407464550|ref|YP_006775432.1| - 5.1e-15 55.5 6.2 1e-08 35.3 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407464550|ref|YP_006775432.1| - 6.4e-15 54.8 11.5 3.4e-06 26.9 0.4 3.4 2 1 2 4 4 3 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407464550|ref|YP_006775432.1| - 5.6e-13 48.2 5.7 0.0017 18.8 0.0 5.3 3 1 3 6 6 5 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407464550|ref|YP_006775432.1| - 2.2e-12 45.7 10.8 0.00068 19.2 0.0 5.5 4 1 1 5 5 5 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|407464550|ref|YP_006775432.1| - 1.8e-09 37.5 5.6 3.7e-05 23.7 0.9 2.5 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.1 gi|407464550|ref|YP_006775432.1| - 4.5e-09 36.0 0.2 0.00011 21.9 0.0 3.3 2 1 2 4 4 3 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|407464550|ref|YP_006775432.1| - 2.8e-08 33.7 7.2 0.16 12.5 0.1 5.7 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|407464550|ref|YP_006775432.1| - 3.8e-07 29.3 2.9 0.21 11.4 0.0 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|407464550|ref|YP_006775432.1| - 5.8e-06 26.0 0.9 0.1 12.5 0.0 4.0 2 1 2 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.1 gi|407464550|ref|YP_006775432.1| - 8.3e-06 25.5 1.2 7.6 6.6 0.0 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_20 PF14561.1 gi|407464550|ref|YP_006775432.1| - 0.00072 19.6 1.8 0.55 10.3 0.1 2.8 2 0 0 2 2 2 2 Tetratricopeptide repeat ChAPs PF09295.5 gi|407464550|ref|YP_006775432.1| - 0.0038 16.0 0.3 0.0061 15.3 0.2 1.3 1 0 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) Rapsyn_N PF10579.4 gi|407464550|ref|YP_006775432.1| - 0.0042 16.8 0.1 0.76 9.6 0.0 2.7 1 1 1 2 2 2 1 Rapsyn N-terminal myristoylation and linker region HTH_27 PF13463.1 gi|407464550|ref|YP_006775432.1| - 0.0042 17.3 0.3 0.016 15.5 0.1 2.1 2 0 0 2 2 1 1 Winged helix DNA-binding domain YfiO PF13525.1 gi|407464550|ref|YP_006775432.1| - 0.0076 15.7 0.7 0.79 9.1 0.0 2.2 1 1 1 2 2 2 1 Outer membrane lipoprotein TPR_3 PF07720.7 gi|407464550|ref|YP_006775432.1| - 0.036 13.8 3.3 17 5.3 0.3 3.8 3 0 0 3 3 3 0 Tetratricopeptide repeat MIT PF04212.13 gi|407464550|ref|YP_006775432.1| - 0.042 13.7 8.2 19 5.1 0.1 4.3 4 1 1 5 5 5 0 MIT (microtubule interacting and transport) domain FAM180 PF15173.1 gi|407464550|ref|YP_006775432.1| - 0.062 13.0 1.0 2.1 8.1 0.1 2.6 1 1 0 2 2 2 0 FAM180 family Vps4_C PF09336.5 gi|407464550|ref|YP_006775432.1| - 0.15 12.0 0.1 0.4 10.6 0.0 1.7 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain TOM20_plant PF06552.7 gi|407464550|ref|YP_006775432.1| - 0.19 11.3 1.6 0.64 9.5 0.2 2.5 2 1 0 2 2 2 0 Plant specific mitochondrial import receptor subunit TOM20 DUF2122 PF09895.4 gi|407464550|ref|YP_006775432.1| - 0.2 11.8 2.1 12 6.1 0.0 3.1 4 0 0 4 4 3 0 RecB-family nuclease (DUF2122) Rhodanese PF00581.15 gi|407464551|ref|YP_006775433.1| - 8.3e-36 122.7 0.0 1.6e-16 60.6 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain NIR_SIR PF01077.17 gi|407464552|ref|YP_006775434.1| - 1.4e-41 141.4 0.0 2.3e-29 101.7 0.0 2.3 2 0 0 2 2 2 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|407464552|ref|YP_006775434.1| - 1.3e-31 107.9 0.0 1.1e-15 57.0 0.0 2.5 2 0 0 2 2 2 2 Nitrite/Sulfite reductase ferredoxin-like half domain DUF2240 PF09999.4 gi|407464552|ref|YP_006775434.1| - 0.088 12.2 0.0 0.19 11.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) Thi4 PF01946.12 gi|407464553|ref|YP_006775435.1| - 2.2e-65 219.9 0.1 2.7e-65 219.6 0.1 1.1 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.19 gi|407464553|ref|YP_006775435.1| - 1.6e-14 53.5 0.7 5.3e-07 28.8 0.0 3.0 1 1 1 3 3 3 2 FAD binding domain FAD_oxidored PF12831.2 gi|407464553|ref|YP_006775435.1| - 1.1e-10 41.1 0.1 2e-10 40.3 0.0 1.4 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.19 gi|407464553|ref|YP_006775435.1| - 1.4e-09 37.3 0.1 1.7e-05 23.8 0.0 2.3 2 1 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|407464553|ref|YP_006775435.1| - 2.1e-08 34.0 0.0 4.5e-08 32.9 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 gi|407464553|ref|YP_006775435.1| - 1.3e-07 31.6 0.1 2e-07 31.0 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.14 gi|407464553|ref|YP_006775435.1| - 3.3e-07 29.6 0.0 5e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|407464553|ref|YP_006775435.1| - 3.7e-07 28.9 0.0 5.4e-07 28.4 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein Lycopene_cycl PF05834.7 gi|407464553|ref|YP_006775435.1| - 5.2e-05 22.3 0.2 0.00028 19.9 0.1 1.9 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_3 PF13738.1 gi|407464553|ref|YP_006775435.1| - 8.3e-05 22.7 0.1 0.00016 21.8 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|407464553|ref|YP_006775435.1| - 9.1e-05 21.4 0.1 0.00015 20.7 0.1 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.22 gi|407464553|ref|YP_006775435.1| - 0.0034 17.7 0.5 0.011 16.1 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GDI PF00996.13 gi|407464553|ref|YP_006775435.1| - 0.0071 14.7 0.0 0.011 14.0 0.0 1.2 1 0 0 1 1 1 1 GDP dissociation inhibitor TrkA_N PF02254.13 gi|407464553|ref|YP_006775435.1| - 0.0076 16.2 0.0 0.016 15.1 0.0 1.6 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_9 PF13454.1 gi|407464553|ref|YP_006775435.1| - 0.011 15.5 0.1 0.022 14.5 0.1 1.5 1 0 0 1 1 1 0 FAD-NAD(P)-binding Trp_halogenase PF04820.9 gi|407464553|ref|YP_006775435.1| - 0.013 14.1 0.0 0.74 8.3 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase CPSase_L_chain PF00289.17 gi|407464553|ref|YP_006775435.1| - 0.071 13.2 0.0 0.27 11.3 0.0 1.9 2 0 0 2 2 1 0 Carbamoyl-phosphate synthase L chain, N-terminal domain Amino_oxidase PF01593.19 gi|407464553|ref|YP_006775435.1| - 0.12 11.4 0.0 0.18 10.8 0.0 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase ETRAMP PF09716.5 gi|407464554|ref|YP_006775436.1| - 0.0052 16.6 0.8 0.0082 16.0 0.5 1.3 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) HHH_3 PF12836.2 gi|407464554|ref|YP_006775436.1| - 0.058 13.3 0.1 0.09 12.7 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif Ldh_1_C PF02866.13 gi|407464556|ref|YP_006775438.1| - 1.4e-23 83.5 0.1 2.5e-23 82.7 0.0 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.18 gi|407464556|ref|YP_006775438.1| - 3.2e-22 78.8 0.1 6e-22 77.9 0.1 1.5 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Glyco_hydro_4 PF02056.11 gi|407464556|ref|YP_006775438.1| - 3.2e-06 26.5 0.0 6e-06 25.6 0.0 1.5 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Shikimate_DH PF01488.15 gi|407464556|ref|YP_006775438.1| - 0.00072 19.6 0.4 0.0026 17.8 0.0 2.1 2 1 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|407464556|ref|YP_006775438.1| - 0.01 15.5 0.0 0.024 14.3 0.0 1.8 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.13 gi|407464556|ref|YP_006775438.1| - 0.03 13.9 0.1 0.081 12.5 0.1 1.8 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|407464556|ref|YP_006775438.1| - 0.081 11.8 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase Usp PF00582.21 gi|407464557|ref|YP_006775439.1| - 7.2e-30 104.0 0.0 8.4e-30 103.8 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family SRP54 PF00448.17 gi|407464557|ref|YP_006775439.1| - 0.0062 15.9 0.1 0.0085 15.5 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain Ribosomal_S30AE PF02482.14 gi|407464558|ref|YP_006775440.1| - 3.5e-08 33.7 0.1 4.5e-08 33.4 0.1 1.1 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein CBS PF00571.23 gi|407464559|ref|YP_006775441.1| - 4.7e-53 176.7 3.1 5.6e-17 61.2 0.1 4.1 4 0 0 4 4 4 4 CBS domain Usp PF00582.21 gi|407464560|ref|YP_006775442.1| - 2.6e-30 105.4 0.0 3e-30 105.2 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.21 gi|407464561|ref|YP_006775443.1| - 1.8e-26 93.0 0.0 2.3e-26 92.6 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family CBS PF00571.23 gi|407464562|ref|YP_006775444.1| - 6e-31 105.9 1.3 3e-16 58.9 0.1 2.1 2 0 0 2 2 2 2 CBS domain Pyr_redox_2 PF07992.9 gi|407464563|ref|YP_006775445.1| - 4.1e-29 101.9 6.7 7.3e-28 97.8 4.6 3.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|407464563|ref|YP_006775445.1| - 3.4e-18 65.8 1.2 9.8e-17 61.1 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|407464563|ref|YP_006775445.1| - 9.6e-15 55.1 0.2 5.1e-10 39.7 0.0 3.1 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|407464563|ref|YP_006775445.1| - 2.2e-07 30.1 2.4 0.003 16.4 0.2 4.0 3 1 1 4 4 4 2 Glucose inhibited division protein A Thi4 PF01946.12 gi|407464563|ref|YP_006775445.1| - 5.1e-07 29.0 0.1 0.0012 18.0 0.0 2.5 2 0 0 2 2 2 2 Thi4 family FAD_binding_2 PF00890.19 gi|407464563|ref|YP_006775445.1| - 6.2e-06 25.3 4.2 0.00045 19.1 0.1 3.7 3 1 1 4 4 4 1 FAD binding domain K_oxygenase PF13434.1 gi|407464563|ref|YP_006775445.1| - 6.7e-06 25.2 0.2 0.041 12.8 0.0 3.2 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.19 gi|407464563|ref|YP_006775445.1| - 1.7e-05 23.9 6.9 0.0084 15.0 0.0 3.0 3 1 0 3 3 3 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.14 gi|407464563|ref|YP_006775445.1| - 6e-05 22.2 2.0 0.013 14.5 0.0 2.9 2 1 1 3 3 3 1 FAD binding domain HI0933_like PF03486.9 gi|407464563|ref|YP_006775445.1| - 0.00049 18.6 3.7 0.023 13.1 0.1 3.7 3 1 1 4 4 4 1 HI0933-like protein NAD_binding_8 PF13450.1 gi|407464563|ref|YP_006775445.1| - 0.0024 17.8 0.5 0.012 15.6 0.1 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.1 gi|407464563|ref|YP_006775445.1| - 0.004 17.3 0.7 0.031 14.5 0.2 2.4 2 1 0 2 2 2 1 Putative NAD(P)-binding FAD_oxidored PF12831.2 gi|407464563|ref|YP_006775445.1| - 0.0043 16.1 0.0 0.0043 16.1 0.0 1.8 2 1 0 2 2 2 1 FAD dependent oxidoreductase FMO-like PF00743.14 gi|407464563|ref|YP_006775445.1| - 0.086 11.0 0.0 0.17 10.0 0.0 1.5 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like MAF_flag10 PF01973.13 gi|407464563|ref|YP_006775445.1| - 0.093 12.2 0.0 21 4.5 0.0 3.0 2 1 0 2 2 2 0 Protein of unknown function DUF115 NAD_binding_9 PF13454.1 gi|407464563|ref|YP_006775445.1| - 0.098 12.4 4.4 14 5.3 0.0 3.2 3 0 0 3 3 3 0 FAD-NAD(P)-binding Lycopene_cycl PF05834.7 gi|407464563|ref|YP_006775445.1| - 0.18 10.7 1.3 30 3.3 0.1 3.4 3 1 1 4 4 4 0 Lycopene cyclase protein E6 PF00518.12 gi|407464564|ref|YP_006775446.1| - 0.011 16.1 0.5 0.012 15.8 0.3 1.1 1 0 0 1 1 1 0 Early Protein (E6) zf-C3HC4 PF00097.20 gi|407464564|ref|YP_006775446.1| - 0.063 12.9 2.7 2.1 8.0 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.1 gi|407464564|ref|YP_006775446.1| - 0.15 12.0 2.9 3.4 7.7 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.1 gi|407464564|ref|YP_006775446.1| - 0.33 10.8 2.5 5.3 6.9 0.1 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING DUF2847 PF11009.3 gi|407464565|ref|YP_006775447.1| - 0.028 14.0 1.1 0.069 12.7 0.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2847) Nup54 PF13874.1 gi|407464565|ref|YP_006775447.1| - 0.033 13.8 1.2 0.033 13.8 0.8 2.1 1 1 0 2 2 2 0 Nucleoporin complex subunit 54 Tantalus PF15386.1 gi|407464565|ref|YP_006775447.1| - 0.77 9.5 5.3 1.1 9.0 0.2 2.9 2 1 1 3 3 3 0 Drosophila Tantalus-like DUF3810 PF12725.2 gi|407464565|ref|YP_006775447.1| - 4.4 6.1 9.2 0.53 9.1 0.4 2.2 1 1 2 3 3 3 0 Protein of unknown function (DUF3810) PALP PF00291.20 gi|407464566|ref|YP_006775448.1| - 1.4e-55 188.7 0.0 1.8e-55 188.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TusA PF01206.12 gi|407464567|ref|YP_006775449.1| - 7.1e-22 76.7 0.0 8e-22 76.6 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA TMF_DNA_bd PF12329.3 gi|407464568|ref|YP_006775450.1| - 0.0028 17.4 6.5 0.0088 15.8 0.1 2.6 1 1 1 2 2 2 1 TATA element modulatory factor 1 DNA binding GAS PF13851.1 gi|407464568|ref|YP_006775450.1| - 0.015 14.5 4.9 0.028 13.6 3.4 1.4 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Arf PF00025.16 gi|407464568|ref|YP_006775450.1| - 0.037 13.2 2.3 0.044 13.0 1.6 1.2 1 1 0 1 1 1 0 ADP-ribosylation factor family DUF1524 PF07510.6 gi|407464568|ref|YP_006775450.1| - 0.038 13.8 0.4 0.048 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1524) zf-ribbon_3 PF13248.1 gi|407464569|ref|YP_006775451.1| - 0.02 14.0 2.0 0.88 8.8 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain RecR PF02132.10 gi|407464569|ref|YP_006775451.1| - 0.022 14.1 3.4 0.6 9.5 2.7 2.0 1 1 1 2 2 2 0 RecR protein zf-C2HC5 PF06221.8 gi|407464569|ref|YP_006775451.1| - 0.026 14.2 1.0 0.027 14.2 0.7 1.1 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type DUF2527 PF10736.4 gi|407464569|ref|YP_006775451.1| - 0.027 14.0 0.1 0.041 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) DUF4206 PF13901.1 gi|407464569|ref|YP_006775451.1| - 0.029 13.9 0.4 0.03 13.8 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4206) UPF0547 PF10571.4 gi|407464569|ref|YP_006775451.1| - 0.037 13.7 0.6 5.5 6.7 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-C3HC4_2 PF13923.1 gi|407464569|ref|YP_006775451.1| - 0.038 14.0 1.5 0.051 13.6 1.1 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn-ribbon_8 PF09723.5 gi|407464569|ref|YP_006775451.1| - 0.039 13.9 2.2 0.26 11.2 1.8 1.8 1 1 1 2 2 2 0 Zinc ribbon domain RNHCP PF12647.2 gi|407464569|ref|YP_006775451.1| - 0.065 13.0 0.3 0.065 13.0 0.2 1.1 1 0 0 1 1 1 0 RNHCP domain Integrase_Zn PF02022.14 gi|407464569|ref|YP_006775451.1| - 0.065 12.6 2.5 0.096 12.1 0.2 2.0 2 0 0 2 2 2 0 Integrase Zinc binding domain Spt4 PF06093.8 gi|407464569|ref|YP_006775451.1| - 0.092 12.6 1.2 0.11 12.3 0.8 1.1 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger zf-C3HC4_3 PF13920.1 gi|407464569|ref|YP_006775451.1| - 0.11 12.2 1.0 0.14 11.8 0.7 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) C1_1 PF00130.17 gi|407464569|ref|YP_006775451.1| - 0.12 12.1 0.5 0.15 11.8 0.4 1.1 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Rtf2 PF04641.7 gi|407464569|ref|YP_006775451.1| - 0.13 11.3 0.8 0.14 11.3 0.5 1.0 1 0 0 1 1 1 0 Rtf2 RING-finger zinc_ribbon_5 PF13719.1 gi|407464569|ref|YP_006775451.1| - 0.18 11.4 2.5 6.2 6.4 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|407464569|ref|YP_006775451.1| - 0.2 11.2 1.6 3.2 7.3 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|407464569|ref|YP_006775451.1| - 0.21 11.2 1.2 0.27 10.9 0.8 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF164 PF02591.10 gi|407464569|ref|YP_006775451.1| - 0.21 11.4 2.6 5.2 6.9 0.1 2.0 1 1 1 2 2 2 0 Putative zinc ribbon domain zinc_ribbon_4 PF13717.1 gi|407464569|ref|YP_006775451.1| - 0.24 11.1 2.8 6 6.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|407464569|ref|YP_006775451.1| - 0.3 10.9 2.5 0.6 9.9 1.7 1.5 1 1 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.7 gi|407464569|ref|YP_006775451.1| - 0.3 10.4 2.2 2.7 7.4 0.1 2.0 1 1 1 2 2 2 0 TFIIB zinc-binding Rubredoxin PF00301.15 gi|407464569|ref|YP_006775451.1| - 0.35 10.7 1.9 4.8 7.1 0.6 2.0 2 0 0 2 2 2 0 Rubredoxin zf-CSL PF05207.8 gi|407464569|ref|YP_006775451.1| - 0.48 9.9 2.9 1 8.8 2.0 1.6 1 1 0 1 1 1 0 CSL zinc finger DUF3797 PF12677.2 gi|407464569|ref|YP_006775451.1| - 5.9 6.5 7.0 5.1 6.8 1.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) PGG PF13962.1 gi|407464570|ref|YP_006775452.1| - 1.3 8.6 3.6 3.6 7.2 0.4 2.1 1 1 0 2 2 2 0 Domain of unknown function Na_sulph_symp PF00939.14 gi|407464571|ref|YP_006775453.1| - 1.4e-58 198.9 51.5 1.8e-58 198.6 35.7 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.11 gi|407464571|ref|YP_006775453.1| - 2.6e-23 82.1 55.4 1.9e-17 62.8 20.6 2.1 1 1 1 2 2 2 2 Citrate transporter CobT PF06213.7 gi|407464572|ref|YP_006775454.1| - 0.08 12.0 0.0 0.08 12.0 0.0 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT P-II PF00543.17 gi|407464573|ref|YP_006775455.1| - 2.5e-11 43.9 0.6 3.5e-11 43.4 0.4 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II TrmB PF01978.14 gi|407464574|ref|YP_006775456.1| - 0.014 15.0 0.0 0.062 13.0 0.0 2.0 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|407464574|ref|YP_006775456.1| - 0.022 14.3 0.0 0.034 13.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain YceG PF02618.11 gi|407464574|ref|YP_006775456.1| - 0.11 11.4 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 YceG-like family Response_reg PF00072.19 gi|407464575|ref|YP_006775457.1| - 3.2e-18 65.7 0.2 5.9e-18 64.9 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain BCIP PF13862.1 gi|407464575|ref|YP_006775457.1| - 0.026 14.0 0.8 0.026 14.0 0.5 1.9 2 0 0 2 2 2 0 p21-C-terminal region-binding protein TF_Zn_Ribbon PF08271.7 gi|407464578|ref|YP_006775460.1| - 0.0098 15.1 1.3 0.031 13.5 0.9 1.8 1 1 0 1 1 1 1 TFIIB zinc-binding A2L_zn_ribbon PF08792.5 gi|407464578|ref|YP_006775460.1| - 0.055 12.9 1.3 0.61 9.6 0.0 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain NPL4 PF05021.10 gi|407464578|ref|YP_006775460.1| - 0.057 12.5 0.0 0.069 12.2 0.0 1.1 1 0 0 1 1 1 0 NPL4 family zinc-ribbons_6 PF07191.7 gi|407464578|ref|YP_006775460.1| - 0.061 13.1 0.4 8 6.3 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbons Zn_Tnp_IS1595 PF12760.2 gi|407464578|ref|YP_006775460.1| - 0.073 12.8 0.4 0.14 11.9 0.3 1.4 1 1 0 1 1 1 0 Transposase zinc-ribbon domain NOB1_Zn_bind PF08772.6 gi|407464578|ref|YP_006775460.1| - 0.097 12.5 0.9 0.67 9.8 0.1 2.2 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like GFA PF04828.9 gi|407464578|ref|YP_006775460.1| - 0.11 12.5 2.3 0.16 11.9 0.1 2.0 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme DUF3279 PF11682.3 gi|407464578|ref|YP_006775460.1| - 0.12 11.9 1.0 3.1 7.3 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3279) zf-C2H2_6 PF13912.1 gi|407464578|ref|YP_006775460.1| - 0.13 12.2 5.0 1.1 9.2 0.4 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger zf-HIT PF04438.11 gi|407464578|ref|YP_006775460.1| - 0.19 11.4 2.1 1.1 8.9 0.1 2.1 2 0 0 2 2 2 0 HIT zinc finger DZR PF12773.2 gi|407464578|ref|YP_006775460.1| - 0.19 11.5 2.5 0.62 9.9 1.7 1.8 1 1 0 1 1 1 0 Double zinc ribbon Rpr2 PF04032.11 gi|407464578|ref|YP_006775460.1| - 0.31 10.9 4.3 1.8 8.4 3.1 1.9 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Rep_fac-A_C PF08646.5 gi|407464578|ref|YP_006775460.1| - 0.44 10.2 2.4 6.6 6.4 0.1 2.1 1 1 1 2 2 2 0 Replication factor-A C terminal domain HNH_5 PF14279.1 gi|407464578|ref|YP_006775460.1| - 0.46 10.5 3.7 11 6.1 0.2 2.8 1 1 1 2 2 2 0 HNH endonuclease Spore_GerAC PF05504.6 gi|407464579|ref|YP_006775461.1| - 0.067 12.9 2.8 0.094 12.4 1.9 1.3 1 0 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal YqzL PF14006.1 gi|407464579|ref|YP_006775461.1| - 0.17 12.0 1.3 0.46 10.7 0.9 1.7 1 0 0 1 1 1 0 YqzL-like protein ETRAMP PF09716.5 gi|407464579|ref|YP_006775461.1| - 0.33 10.9 3.7 0.59 10.1 2.2 1.7 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) zf-Di19 PF05605.7 gi|407464580|ref|YP_006775462.1| - 0.0088 16.1 0.6 0.011 15.8 0.4 1.3 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding GCD14 PF08704.5 gi|407464581|ref|YP_006775463.1| - 2.8e-36 125.2 0.4 4.6e-36 124.5 0.3 1.4 1 1 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.1 gi|407464581|ref|YP_006775463.1| - 5.3e-11 42.3 0.0 7.9e-11 41.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|407464581|ref|YP_006775463.1| - 2.7e-10 40.1 0.1 4.1e-10 39.5 0.1 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.2 gi|407464581|ref|YP_006775463.1| - 1.3e-09 38.5 0.0 2.3e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|407464581|ref|YP_006775463.1| - 1.3e-07 31.6 0.0 4.2e-07 30.0 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.1 gi|407464581|ref|YP_006775463.1| - 3.6e-07 30.9 0.0 7.2e-07 30.0 0.0 1.5 1 1 1 2 2 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|407464581|ref|YP_006775463.1| - 3.6e-07 29.5 0.0 5.1e-07 29.0 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family RrnaAD PF00398.15 gi|407464581|ref|YP_006775463.1| - 1.6e-06 27.3 0.0 2.3e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_3 PF01596.12 gi|407464581|ref|YP_006775463.1| - 9.9e-06 24.7 0.1 1.7e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_11 PF08241.7 gi|407464581|ref|YP_006775463.1| - 1.4e-05 25.4 0.0 3.2e-05 24.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|407464581|ref|YP_006775463.1| - 3e-05 23.2 0.0 4.6e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_12 PF08242.7 gi|407464581|ref|YP_006775463.1| - 5.9e-05 23.4 0.0 0.00014 22.2 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|407464581|ref|YP_006775463.1| - 5.9e-05 22.5 0.1 0.00016 21.0 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase small domain Fibrillarin PF01269.12 gi|407464581|ref|YP_006775463.1| - 0.00061 18.7 0.0 0.00092 18.1 0.0 1.4 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.1 gi|407464581|ref|YP_006775463.1| - 0.0011 19.3 0.0 0.0018 18.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.4 gi|407464581|ref|YP_006775463.1| - 0.0015 18.0 0.1 0.003 17.0 0.0 1.5 2 0 0 2 2 1 1 Putative methyltransferase Met_10 PF02475.11 gi|407464581|ref|YP_006775463.1| - 0.004 16.7 0.1 0.0059 16.2 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_32 PF13679.1 gi|407464581|ref|YP_006775463.1| - 0.011 15.4 0.1 0.032 13.9 0.1 2.0 1 1 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.13 gi|407464581|ref|YP_006775463.1| - 0.012 15.1 0.0 0.021 14.3 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 CMAS PF02353.15 gi|407464581|ref|YP_006775463.1| - 0.022 13.8 0.0 0.036 13.1 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DUF43 PF01861.11 gi|407464581|ref|YP_006775463.1| - 0.023 13.7 0.0 0.045 12.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF43 DUF938 PF06080.7 gi|407464581|ref|YP_006775463.1| - 0.055 13.0 0.0 0.096 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_23 PF13489.1 gi|407464581|ref|YP_006775463.1| - 0.058 13.1 0.0 0.09 12.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Carb_kinase PF01256.12 gi|407464582|ref|YP_006775464.1| - 1.5e-48 165.2 0.3 1.7e-48 165.0 0.2 1.0 1 0 0 1 1 1 1 Carbohydrate kinase HK PF02110.10 gi|407464582|ref|YP_006775464.1| - 3.8e-11 42.6 0.0 7.6e-11 41.6 0.0 1.4 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.7 gi|407464582|ref|YP_006775464.1| - 8.6e-06 25.1 0.0 1.3e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Peptidase_M20 PF01546.23 gi|407464583|ref|YP_006775465.1| - 1e-29 103.3 0.0 1.5e-29 102.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|407464583|ref|YP_006775465.1| - 2.6e-11 43.2 0.0 5.4e-11 42.2 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Tox-PL-2 PF15643.1 gi|407464583|ref|YP_006775465.1| - 0.038 13.9 0.0 0.087 12.8 0.0 1.5 1 0 0 1 1 1 0 Papain fold toxin 2 DoxX PF07681.7 gi|407464584|ref|YP_006775466.1| - 4.2e-15 55.9 3.5 7.2e-15 55.1 2.4 1.4 1 0 0 1 1 1 1 DoxX DoxX_2 PF13564.1 gi|407464584|ref|YP_006775466.1| - 3.4e-05 23.7 2.3 4.9e-05 23.2 1.6 1.3 1 1 0 1 1 1 1 DoxX-like family DoxD PF04173.8 gi|407464584|ref|YP_006775466.1| - 7.3e-05 22.4 5.3 0.00013 21.6 3.4 1.4 1 1 0 1 1 1 1 TQO small subunit DoxD Proteasome PF00227.21 gi|407464585|ref|YP_006775467.1| - 1.4e-45 154.8 0.0 1.6e-45 154.7 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit PUA PF01472.15 gi|407464586|ref|YP_006775468.1| - 1.2e-17 63.3 0.2 1.8e-17 62.8 0.1 1.3 1 0 0 1 1 1 1 PUA domain DUF762 PF05555.6 gi|407464586|ref|YP_006775468.1| - 0.053 12.7 0.1 0.083 12.1 0.1 1.3 1 0 0 1 1 1 0 Coxiella burnetii protein of unknown function (DUF762) Homoserine_dh PF00742.14 gi|407464587|ref|YP_006775469.1| - 6.9e-55 185.4 0.1 1.1e-54 184.8 0.0 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.11 gi|407464587|ref|YP_006775469.1| - 1.4e-07 31.8 0.0 3.1e-07 30.7 0.0 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.16 gi|407464587|ref|YP_006775469.1| - 3.1e-06 26.9 0.2 8e-06 25.6 0.1 1.7 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SelR PF01641.13 gi|407464588|ref|YP_006775470.1| - 4.2e-51 171.8 0.4 4.8e-51 171.6 0.3 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.9 gi|407464588|ref|YP_006775470.1| - 0.014 15.3 3.2 0.1 12.6 2.2 2.0 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DZR PF12773.2 gi|407464588|ref|YP_006775470.1| - 0.27 11.0 3.9 8.1 6.3 0.3 2.4 2 1 0 2 2 2 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|407464588|ref|YP_006775470.1| - 1.8 7.8 7.8 2.5 7.4 0.4 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|407464588|ref|YP_006775470.1| - 3.9 7.0 7.9 5.2 6.6 0.1 2.8 3 0 0 3 3 3 0 zinc-ribbon domain Thy1 PF02511.10 gi|407464589|ref|YP_006775471.1| - 6.1e-29 100.7 3.0 1.1e-14 54.2 0.8 2.5 2 1 0 2 2 2 2 Thymidylate synthase complementing protein LMF1 PF06762.9 gi|407464589|ref|YP_006775471.1| - 0.003 16.4 0.0 0.0045 15.8 0.0 1.2 1 0 0 1 1 1 1 Lipase maturation factor GLTP PF08718.6 gi|407464589|ref|YP_006775471.1| - 0.32 11.0 3.4 0.31 11.0 0.8 2.1 2 1 0 2 2 2 0 Glycolipid transfer protein (GLTP) Spore_II_R PF09551.5 gi|407464589|ref|YP_006775471.1| - 0.72 9.8 4.6 0.61 10.1 1.4 2.2 1 1 1 2 2 2 0 Stage II sporulation protein R (spore_II_R) CBFD_NFYB_HMF PF00808.18 gi|407464591|ref|YP_006775473.1| - 0.0064 16.5 0.6 0.015 15.3 0.4 1.7 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone AMP-binding PF00501.23 gi|407464592|ref|YP_006775474.1| - 1.9e-95 319.7 0.0 2.5e-95 319.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|407464592|ref|YP_006775474.1| - 4.4e-22 78.8 0.0 8.8e-22 77.8 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain PAS_9 PF13426.1 gi|407464593|ref|YP_006775475.1| - 3.2e-10 40.3 0.0 5e-10 39.6 0.0 1.3 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|407464593|ref|YP_006775475.1| - 3.5e-10 39.6 0.1 7.3e-10 38.6 0.0 1.5 2 0 0 2 2 2 1 PAS fold PAS_4 PF08448.5 gi|407464593|ref|YP_006775475.1| - 0.00018 21.5 0.0 0.00023 21.1 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.6 gi|407464593|ref|YP_006775475.1| - 0.00051 20.0 0.0 0.00082 19.4 0.0 1.4 1 0 0 1 1 1 1 PAS fold Herpes_UL46 PF03387.9 gi|407464593|ref|YP_006775475.1| - 0.074 11.2 0.0 0.081 11.1 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL46 protein Retrotrans_gag PF03732.12 gi|407464593|ref|YP_006775475.1| - 0.078 13.0 3.1 0.7 9.9 0.3 2.3 1 1 1 2 2 2 0 Retrotransposon gag protein XPG_I PF00867.13 gi|407464594|ref|YP_006775476.1| - 3e-23 81.7 0.0 6e-23 80.7 0.0 1.5 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.12 gi|407464594|ref|YP_006775476.1| - 2.1e-21 76.0 0.0 7.4e-21 74.3 0.0 1.9 2 0 0 2 2 2 1 XPG N-terminal domain 5_3_exonuc PF01367.15 gi|407464594|ref|YP_006775476.1| - 3.3e-05 24.0 0.0 9.2e-05 22.6 0.0 1.8 1 1 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold HHH_2 PF12826.2 gi|407464594|ref|YP_006775476.1| - 0.019 14.8 0.0 0.32 10.9 0.0 2.8 2 0 0 2 2 2 0 Helix-hairpin-helix motif Mad3_BUB1_II PF08171.6 gi|407464596|ref|YP_006775478.1| - 0.0062 16.4 0.2 0.013 15.3 0.1 1.5 1 0 0 1 1 1 1 Mad3/BUB1 homology region 2 zf-primase PF09329.6 gi|407464597|ref|YP_006775479.1| - 5.1 6.7 6.9 5.4 6.6 0.3 2.2 1 1 1 2 2 2 0 Primase zinc finger Nitroreductase PF00881.19 gi|407464598|ref|YP_006775480.1| - 1.3e-30 106.3 0.0 1.8e-30 105.9 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family AsnC_trans_reg PF01037.16 gi|407464599|ref|YP_006775481.1| - 3.4e-10 39.4 0.1 4e-10 39.2 0.1 1.0 1 0 0 1 1 1 1 AsnC family LAGLIDADG_WhiA PF14527.1 gi|407464599|ref|YP_006775481.1| - 0.056 13.3 0.2 0.092 12.6 0.1 1.4 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain SHOCT PF09851.4 gi|407464600|ref|YP_006775482.1| - 0.16 11.4 0.4 0.32 10.5 0.3 1.5 1 0 0 1 1 1 0 Short C-terminal domain DUF4097 PF13349.1 gi|407464601|ref|YP_006775483.1| - 0.096 12.2 0.1 12 5.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4097) Polyketide_cyc2 PF10604.4 gi|407464602|ref|YP_006775484.1| - 1.3e-15 57.7 0.0 1.6e-15 57.4 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.15 gi|407464602|ref|YP_006775484.1| - 0.036 14.0 0.0 0.044 13.7 0.0 1.2 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport COX6A PF02046.10 gi|407464602|ref|YP_006775484.1| - 0.12 12.3 0.3 0.23 11.4 0.1 1.6 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VIa APG6 PF04111.7 gi|407464603|ref|YP_006775485.1| - 0.0012 17.9 26.1 0.0018 17.3 8.0 2.4 3 0 0 3 3 3 2 Autophagy protein Apg6 Spc7 PF08317.6 gi|407464603|ref|YP_006775485.1| - 0.011 14.4 32.1 0.013 14.2 2.7 2.8 3 0 0 3 3 3 0 Spc7 kinetochore protein Reo_sigmaC PF04582.7 gi|407464603|ref|YP_006775485.1| - 0.028 13.6 18.6 0.16 11.1 0.7 2.8 2 1 0 3 3 3 0 Reovirus sigma C capsid protein NPV_P10 PF05531.7 gi|407464603|ref|YP_006775485.1| - 0.035 14.3 20.8 0.26 11.5 0.5 5.3 4 1 1 5 5 5 0 Nucleopolyhedrovirus P10 protein Baculo_PEP_C PF04513.7 gi|407464603|ref|YP_006775485.1| - 0.039 13.7 25.4 0.062 13.1 0.8 4.5 2 1 2 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus MCPsignal PF00015.16 gi|407464603|ref|YP_006775485.1| - 0.049 13.1 9.6 0.97 8.9 0.9 2.9 2 1 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain IncA PF04156.9 gi|407464603|ref|YP_006775485.1| - 0.074 12.6 23.2 0.03 13.8 3.4 3.1 2 1 1 4 4 4 0 IncA protein PTPA PF03095.10 gi|407464603|ref|YP_006775485.1| - 0.12 11.5 9.8 0.081 12.0 3.1 2.5 1 1 1 2 2 2 0 Phosphotyrosyl phosphate activator (PTPA) protein MscS_porin PF12795.2 gi|407464603|ref|YP_006775485.1| - 0.2 10.9 19.6 3.9 6.7 0.1 2.9 2 1 0 2 2 2 0 Mechanosensitive ion channel porin domain COG2 PF06148.6 gi|407464603|ref|YP_006775485.1| - 0.21 11.4 11.8 8.8 6.2 0.1 4.1 2 2 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 SRP1_TIP1 PF00660.12 gi|407464603|ref|YP_006775485.1| - 0.21 11.4 4.6 0.38 10.5 0.2 3.3 2 2 2 4 4 4 0 Seripauperin and TIP1 family DUF4349 PF14257.1 gi|407464603|ref|YP_006775485.1| - 0.32 10.1 4.5 3.9 6.6 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) NUC130_3NT PF08158.7 gi|407464603|ref|YP_006775485.1| - 0.32 11.2 3.1 5.2 7.4 0.0 3.5 3 0 0 3 3 3 0 NUC130/3NT domain Syntaxin-6_N PF09177.6 gi|407464603|ref|YP_006775485.1| - 0.44 10.9 22.8 1.3 9.5 5.3 4.6 3 2 1 4 4 4 0 Syntaxin 6, N-terminal DUF2959 PF11172.3 gi|407464603|ref|YP_006775485.1| - 0.63 9.7 17.0 0.38 10.4 0.4 3.6 2 1 1 4 4 3 0 Protein of unknown function (DUF2959) DUF3450 PF11932.3 gi|407464603|ref|YP_006775485.1| - 2.3 7.4 12.3 4.3 6.5 3.0 3.4 2 2 1 3 3 3 0 Protein of unknown function (DUF3450) CENP-H PF05837.7 gi|407464603|ref|YP_006775485.1| - 2.9 8.1 22.6 2.6 8.2 2.0 4.3 2 2 1 3 3 3 0 Centromere protein H (CENP-H) ArdA PF07275.6 gi|407464603|ref|YP_006775485.1| - 3.1 8.0 7.0 2.9 8.0 0.5 2.7 1 1 0 2 2 2 0 Antirestriction protein (ArdA) AAA_13 PF13166.1 gi|407464603|ref|YP_006775485.1| - 6.1 5.1 39.4 0.21 10.0 12.6 2.8 1 1 2 3 3 3 0 AAA domain Prok-JAB PF14464.1 gi|407464604|ref|YP_006775486.1| - 1.6e-12 46.8 0.0 2.1e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.16 gi|407464604|ref|YP_006775486.1| - 0.0014 18.3 0.1 0.0068 16.1 0.0 1.8 1 1 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease RadC PF04002.10 gi|407464604|ref|YP_006775486.1| - 0.016 14.8 0.0 0.026 14.2 0.0 1.3 1 0 0 1 1 1 0 RadC-like JAB domain zf-NADH-PPase PF09297.6 gi|407464605|ref|YP_006775487.1| - 0.043 13.3 0.7 0.043 13.3 0.5 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Peptidase_C74 PF12387.3 gi|407464605|ref|YP_006775487.1| - 0.077 12.1 1.4 0.12 11.5 0.9 1.2 1 0 0 1 1 1 0 Pestivirus NS2 peptidase zf-HIT PF04438.11 gi|407464605|ref|YP_006775487.1| - 0.46 10.1 3.7 0.74 9.5 2.6 1.4 1 0 0 1 1 1 0 HIT zinc finger Zn_ribbon_recom PF13408.1 gi|407464605|ref|YP_006775487.1| - 0.7 10.2 5.6 6.2 7.1 3.9 2.3 1 1 0 1 1 1 0 Recombinase zinc beta ribbon domain Zn-ribbon_8 PF09723.5 gi|407464605|ref|YP_006775487.1| - 1.1 9.2 4.1 4.5 7.3 2.9 1.8 1 1 0 1 1 1 0 Zinc ribbon domain TFIIS_C PF01096.13 gi|407464605|ref|YP_006775487.1| - 2.7 7.7 4.6 21 4.8 0.3 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) SAG PF04092.8 gi|407464606|ref|YP_006775488.1| - 0.023 15.0 0.0 0.027 14.8 0.0 1.1 1 0 0 1 1 1 0 SRS domain DUF3081 PF11280.3 gi|407464606|ref|YP_006775488.1| - 0.033 13.7 0.1 0.38 10.3 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3081) BPD_transp_1 PF00528.17 gi|407464607|ref|YP_006775489.1| - 2.5e-25 89.0 9.4 2.5e-25 89.0 6.5 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|407464607|ref|YP_006775489.1| - 0.00099 18.4 0.1 0.0042 16.4 0.1 2.1 1 0 0 1 1 1 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.17 gi|407464608|ref|YP_006775490.1| - 2e-34 118.7 21.2 2e-34 118.7 14.7 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF4001 PF13165.1 gi|407464609|ref|YP_006775491.1| - 0.0077 15.8 6.3 0.48 10.1 0.2 3.0 3 0 0 3 3 3 2 Protein of unknown function (DUF4001) zinc_ribbon_6 PF14599.1 gi|407464609|ref|YP_006775491.1| - 0.029 14.1 15.3 0.41 10.4 1.7 3.4 2 2 1 3 3 3 0 Zinc-ribbon C1_1 PF00130.17 gi|407464609|ref|YP_006775491.1| - 0.036 13.7 12.2 0.35 10.6 2.0 2.2 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Stig1 PF04885.8 gi|407464609|ref|YP_006775491.1| - 0.17 12.1 6.5 4.1 7.5 0.4 2.5 2 0 0 2 2 2 0 Stigma-specific protein, Stig1 DUF1059 PF06348.6 gi|407464609|ref|YP_006775491.1| - 0.22 11.3 4.0 3.8 7.3 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1059) Molybdop_Fe4S4 PF04879.11 gi|407464609|ref|YP_006775491.1| - 0.33 10.8 9.8 0.53 10.1 1.1 2.2 2 0 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain DZR PF12773.2 gi|407464609|ref|YP_006775491.1| - 0.34 10.7 16.0 0.76 9.6 3.0 2.3 2 0 0 2 2 2 0 Double zinc ribbon DNA_RNApol_7kD PF03604.8 gi|407464609|ref|YP_006775491.1| - 0.54 9.7 18.0 2.3 7.7 3.7 3.1 2 2 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit LIM PF00412.17 gi|407464609|ref|YP_006775491.1| - 1.8 8.7 15.2 2.8 8.0 2.4 2.2 2 0 0 2 2 2 0 LIM domain T4_baseplate PF12322.3 gi|407464609|ref|YP_006775491.1| - 2.3 7.4 4.2 4.5 6.4 0.4 2.1 2 0 0 2 2 2 0 T4 bacteriophage base plate protein Elf1 PF05129.8 gi|407464609|ref|YP_006775491.1| - 5.5 6.7 10.7 5.4 6.7 0.5 2.9 2 2 0 2 2 2 0 Transcription elongation factor Elf1 like DUF2196 PF09962.4 gi|407464610|ref|YP_006775492.1| - 5.9e-28 96.4 2.0 6.3e-28 96.3 1.4 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) ArsC PF03960.10 gi|407464612|ref|YP_006775494.1| - 3.3e-24 85.0 2.1 3.9e-24 84.8 1.4 1.0 1 0 0 1 1 1 1 ArsC family Glutaredoxin PF00462.19 gi|407464612|ref|YP_006775494.1| - 0.0001 22.1 3.7 0.0025 17.7 0.2 2.1 1 1 1 2 2 2 2 Glutaredoxin CarboxypepD_reg PF13620.1 gi|407464613|ref|YP_006775495.1| - 1e-05 25.4 1.4 2.6e-05 24.2 1.0 1.6 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain PAC2 PF09754.4 gi|407464615|ref|YP_006775497.1| - 1.6e-17 64.1 0.0 1.8e-17 63.9 0.0 1.0 1 0 0 1 1 1 1 PAC2 family SNF2_N PF00176.18 gi|407464616|ref|YP_006775498.1| - 6.1e-38 130.3 0.1 9.4e-38 129.6 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 gi|407464616|ref|YP_006775498.1| - 1.4e-08 34.5 0.1 3.4e-08 33.2 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|407464616|ref|YP_006775498.1| - 9.6e-08 31.7 0.0 4.3e-07 29.5 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 gi|407464616|ref|YP_006775498.1| - 1.7e-06 28.0 3.0 4.4e-06 26.6 0.0 2.7 2 1 1 3 3 3 1 Type III restriction enzyme, res subunit PTPlike_phytase PF14566.1 gi|407464616|ref|YP_006775498.1| - 0.091 12.8 1.1 0.22 11.5 0.7 1.6 1 0 0 1 1 1 0 Inositol hexakisphosphate HTH_20 PF12840.2 gi|407464617|ref|YP_006775499.1| - 0.073 12.8 0.0 2.2 8.1 0.0 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain Sod_Fe_C PF02777.13 gi|407464618|ref|YP_006775500.1| - 2.8e-41 139.6 2.5 4.8e-41 138.8 1.8 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.17 gi|407464618|ref|YP_006775500.1| - 3.9e-24 84.7 0.0 8.4e-24 83.6 0.0 1.6 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain DUF1176 PF06674.6 gi|407464619|ref|YP_006775501.1| - 0.0029 16.7 0.0 0.0043 16.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1176) Mad3_BUB1_II PF08171.6 gi|407464620|ref|YP_006775502.1| - 0.0032 17.3 0.1 0.0073 16.1 0.0 1.6 2 0 0 2 2 2 1 Mad3/BUB1 homology region 2 Ornatin PF02088.10 gi|407464622|ref|YP_006775504.1| - 0.013 15.0 3.5 0.019 14.4 2.5 1.4 1 1 0 1 1 1 0 Ornatin Bac_globin PF01152.16 gi|407464622|ref|YP_006775504.1| - 0.035 14.1 0.1 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial-like globin GFA PF04828.9 gi|407464622|ref|YP_006775504.1| - 0.16 11.9 1.7 0.77 9.7 1.2 1.8 1 1 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme zf-C3HC4_3 PF13920.1 gi|407464622|ref|YP_006775504.1| - 0.34 10.6 3.0 1 9.0 2.1 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-CXXC PF02008.15 gi|407464622|ref|YP_006775504.1| - 0.68 9.7 3.1 1.1 9.1 0.1 2.0 1 1 1 2 2 2 0 CXXC zinc finger domain DUF1425 PF07233.7 gi|407464623|ref|YP_006775505.1| - 0.02 14.4 0.2 0.025 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1425) Transglut_C PF00927.17 gi|407464623|ref|YP_006775505.1| - 0.047 13.7 0.0 0.066 13.2 0.0 1.2 1 0 0 1 1 1 0 Transglutaminase family, C-terminal ig like domain FAD-oxidase_C PF02913.14 gi|407464624|ref|YP_006775506.1| - 6.9e-41 140.2 0.0 8.6e-41 139.8 0.0 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.18 gi|407464624|ref|YP_006775506.1| - 6.1e-31 106.7 0.0 1.7e-30 105.2 0.0 1.7 2 0 0 2 2 2 1 FAD binding domain Cytokin-bind PF09265.5 gi|407464624|ref|YP_006775506.1| - 0.006 15.7 0.0 0.014 14.5 0.0 1.6 1 0 0 1 1 1 1 Cytokinin dehydrogenase 1, FAD and cytokinin binding UPF0565 PF10561.4 gi|407464625|ref|YP_006775507.1| - 0.0047 15.8 0.1 0.019 13.9 0.0 1.8 2 0 0 2 2 2 1 Uncharacterised protein family UPF0565 HD PF01966.17 gi|407464625|ref|YP_006775507.1| - 0.036 14.0 0.0 0.084 12.8 0.0 1.6 1 0 0 1 1 1 0 HD domain Phage_integrase PF00589.17 gi|407464626|ref|YP_006775508.1| - 1.4e-06 28.1 0.1 2.8e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Phage integrase family Mga PF05043.8 gi|407464626|ref|YP_006775508.1| - 0.058 13.6 5.3 2.1 8.6 1.6 3.5 2 1 1 3 3 3 0 Mga helix-turn-helix domain Cuticle_2 PF08184.6 gi|407464626|ref|YP_006775508.1| - 0.081 12.7 1.7 0.11 12.2 0.2 1.9 2 0 0 2 2 2 0 Cuticle protein 7 isoform family COX7B PF05392.6 gi|407464628|ref|YP_006775510.1| - 0.15 11.6 0.0 0.45 10.1 0.0 1.8 2 0 0 2 2 2 0 Cytochrome C oxidase chain VIIB ParBc PF02195.13 gi|407464629|ref|YP_006775511.1| - 1.3e-05 25.2 0.0 6.3e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 ParB-like nuclease domain zf-ribbon_3 PF13248.1 gi|407464630|ref|YP_006775512.1| - 0.0068 15.5 1.4 0.0077 15.4 0.1 1.7 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|407464630|ref|YP_006775512.1| - 0.014 14.8 1.1 0.025 14.0 0.2 1.8 2 0 0 2 2 2 0 zinc-ribbon domain AhpC-TSA PF00578.16 gi|407464630|ref|YP_006775512.1| - 0.082 12.6 0.1 0.12 12.1 0.1 1.3 1 0 0 1 1 1 0 AhpC/TSA family zf-FCS PF06467.9 gi|407464630|ref|YP_006775512.1| - 0.19 11.4 3.8 2.3 7.9 0.0 2.4 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Cys_rich_CPXG PF14255.1 gi|407464630|ref|YP_006775512.1| - 0.22 11.3 0.9 0.22 11.3 0.6 2.1 2 1 0 2 2 2 0 Cysteine-rich CPXCG zf-Di19 PF05605.7 gi|407464630|ref|YP_006775512.1| - 7.9 6.6 7.0 0.72 10.0 0.2 2.2 2 1 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DUF4490 PF14892.1 gi|407464631|ref|YP_006775513.1| - 0.075 12.6 2.0 0.12 12.0 0.7 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4490) DUF2963 PF11178.3 gi|407464634|ref|YP_006775516.1| - 1 8.8 7.7 3.1 7.2 0.0 3.8 4 0 0 4 4 4 0 Protein of unknown function (DUF2963) DUF4367 PF14285.1 gi|407464635|ref|YP_006775517.1| - 0.0015 17.8 0.0 0.0054 16.0 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4367) PapD_N PF00345.15 gi|407464635|ref|YP_006775517.1| - 0.0044 16.8 0.1 0.0087 15.8 0.0 1.5 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain FixG_C PF11614.3 gi|407464635|ref|YP_006775517.1| - 0.0053 16.8 0.0 0.011 15.8 0.0 1.6 1 0 0 1 1 1 1 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF3817 PF12823.2 gi|407464636|ref|YP_006775518.1| - 0.97 9.9 5.6 0.13 12.7 1.2 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3817) DUF3571 PF12095.3 gi|407464639|ref|YP_006775521.1| - 0.027 14.6 2.8 6 7.1 0.0 3.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3571) DUF4354 PF14263.1 gi|407464640|ref|YP_006775522.1| - 0.043 13.5 0.0 0.076 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) DUF4299 PF14132.1 gi|407464640|ref|YP_006775522.1| - 0.048 12.7 0.0 0.057 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4299) DUF3821 PF12863.2 gi|407464640|ref|YP_006775522.1| - 0.049 13.3 0.1 0.057 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3821) FlgD_ig PF13860.1 gi|407464640|ref|YP_006775522.1| - 0.065 12.9 0.0 0.15 11.8 0.0 1.7 1 1 0 1 1 1 0 FlgD Ig-like domain RELT PF12606.3 gi|407464641|ref|YP_006775523.1| - 0.02 14.0 1.1 0.032 13.3 0.8 1.3 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 HTH_24 PF13412.1 gi|407464642|ref|YP_006775524.1| - 8.1e-08 31.5 0.6 1.9e-07 30.3 0.4 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|407464642|ref|YP_006775524.1| - 3e-05 23.6 0.6 0.00011 21.8 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.12 gi|407464642|ref|YP_006775524.1| - 5.7e-05 22.5 1.7 0.0001 21.7 1.2 1.4 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_20 PF12840.2 gi|407464642|ref|YP_006775524.1| - 0.00013 21.7 0.0 0.00019 21.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2250 PF10007.4 gi|407464642|ref|YP_006775524.1| - 0.0021 17.9 2.0 0.0041 17.0 1.4 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_Mga PF08280.6 gi|407464642|ref|YP_006775524.1| - 0.0033 17.1 1.5 0.0073 16.0 1.1 1.6 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_45 PF14947.1 gi|407464642|ref|YP_006775524.1| - 0.0034 17.1 3.9 0.0084 15.9 2.7 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix Sigma70_r4_2 PF08281.7 gi|407464642|ref|YP_006775524.1| - 0.0044 16.4 0.0 0.0093 15.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 TPPK_C PF12555.3 gi|407464642|ref|YP_006775524.1| - 0.012 15.3 0.6 0.056 13.1 0.1 2.1 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal TrmB PF01978.14 gi|407464642|ref|YP_006775524.1| - 0.018 14.7 0.2 0.038 13.7 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_9 PF08221.6 gi|407464642|ref|YP_006775524.1| - 0.02 14.7 0.2 0.058 13.2 0.1 1.8 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DnaB_C PF03796.10 gi|407464642|ref|YP_006775524.1| - 0.02 13.7 4.7 0.028 13.2 3.3 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain HTH_11 PF08279.7 gi|407464642|ref|YP_006775524.1| - 0.042 13.5 0.2 0.096 12.3 0.1 1.6 1 0 0 1 1 1 0 HTH domain SPATA6 PF14909.1 gi|407464642|ref|YP_006775524.1| - 0.049 13.6 0.5 0.082 12.9 0.4 1.3 1 0 0 1 1 1 0 Spermatogenesis-assoc protein 6 Sigma70_r4 PF04545.11 gi|407464642|ref|YP_006775524.1| - 0.054 12.8 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_34 PF13601.1 gi|407464642|ref|YP_006775524.1| - 0.054 13.5 1.1 0.1 12.6 0.8 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|407464642|ref|YP_006775524.1| - 0.059 13.5 0.1 0.25 11.4 0.1 2.0 2 0 0 2 2 1 0 Transcriptional regulator MarR_2 PF12802.2 gi|407464642|ref|YP_006775524.1| - 0.06 13.0 0.0 0.15 11.7 0.0 1.6 2 0 0 2 2 2 0 MarR family RAMP4 PF06624.7 gi|407464646|ref|YP_006775528.1| - 0.17 11.4 0.5 0.23 11.0 0.0 1.4 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 COX7a PF02238.10 gi|407464646|ref|YP_006775528.1| - 3.6 7.3 4.8 7.1 6.4 0.3 2.4 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VIIa HTH_20 PF12840.2 gi|407464648|ref|YP_006775530.1| - 0.00028 20.6 0.0 0.0004 20.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|407464648|ref|YP_006775530.1| - 0.0036 16.9 0.0 0.0066 16.1 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|407464648|ref|YP_006775530.1| - 0.063 13.3 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain BRCA2 PF00634.13 gi|407464648|ref|YP_006775530.1| - 0.1 11.9 0.1 0.43 9.9 0.1 1.9 2 0 0 2 2 2 0 BRCA2 repeat SRI PF08236.6 gi|407464648|ref|YP_006775530.1| - 0.17 11.8 4.3 0.22 11.5 0.3 2.5 2 0 0 2 2 2 0 SRI (Set2 Rpb1 interacting) domain Glycos_transf_2 PF00535.21 gi|407464650|ref|YP_006775532.1| - 6.7e-29 100.7 0.0 1.4e-28 99.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 GtrA PF04138.9 gi|407464650|ref|YP_006775532.1| - 2.4e-21 75.8 13.5 1e-20 73.8 9.7 1.8 1 1 0 1 1 1 1 GtrA-like protein Glyco_tranf_2_3 PF13641.1 gi|407464650|ref|YP_006775532.1| - 3.9e-11 43.2 0.0 7.1e-11 42.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|407464650|ref|YP_006775532.1| - 4.2e-05 22.7 0.1 6.6e-05 22.1 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 NTP_transf_3 PF12804.2 gi|407464650|ref|YP_006775532.1| - 0.011 15.8 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 MobA-like NTP transferase domain Glyco_transf_21 PF13506.1 gi|407464650|ref|YP_006775532.1| - 0.089 12.0 0.0 0.2 10.9 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 21 PMT_2 PF13231.1 gi|407464651|ref|YP_006775533.1| - 8.4e-16 58.2 14.7 8.4e-16 58.2 10.2 2.6 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Tom7 PF08038.7 gi|407464651|ref|YP_006775533.1| - 2.6 7.5 8.3 13 5.3 0.2 3.4 3 0 0 3 3 3 0 TOM7 family A2M_N PF01835.14 gi|407464652|ref|YP_006775534.1| - 0.00021 21.5 0.0 0.00029 21.0 0.0 1.2 1 0 0 1 1 1 1 MG2 domain DUF884 PF05959.6 gi|407464652|ref|YP_006775534.1| - 0.035 13.4 0.0 0.05 12.9 0.0 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF884) TIMP PF00965.12 gi|407464653|ref|YP_006775535.1| - 1.2e-07 31.5 0.0 1.4e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Tissue inhibitor of metalloproteinase RFX_DNA_binding PF02257.10 gi|407464653|ref|YP_006775535.1| - 0.064 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 RFX DNA-binding domain HTH_5 PF01022.15 gi|407464656|ref|YP_006775538.1| - 7.6e-07 28.7 0.3 2.3e-06 27.1 0.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|407464656|ref|YP_006775538.1| - 4.5e-06 25.9 0.2 9.7e-06 24.8 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|407464656|ref|YP_006775538.1| - 7.3e-06 25.6 0.0 1.3e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|407464656|ref|YP_006775538.1| - 0.002 17.7 0.0 0.0037 16.8 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 gi|407464656|ref|YP_006775538.1| - 0.015 14.9 0.1 0.03 13.9 0.1 1.5 1 0 0 1 1 1 0 HTH domain Rrf2 PF02082.15 gi|407464656|ref|YP_006775538.1| - 0.019 15.0 0.2 0.043 13.9 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator Trypan_PARP PF05887.6 gi|407464656|ref|YP_006775538.1| - 0.023 14.5 6.3 0.059 13.1 4.3 1.6 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Glyco_tranf_2_5 PF13712.1 gi|407464656|ref|YP_006775538.1| - 0.025 13.8 0.1 0.037 13.2 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family TrmB PF01978.14 gi|407464656|ref|YP_006775538.1| - 0.026 14.1 0.1 0.047 13.3 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB EAP30 PF04157.11 gi|407464656|ref|YP_006775538.1| - 0.043 12.9 0.6 0.084 12.0 0.0 1.7 2 0 0 2 2 2 0 EAP30/Vps36 family TFIIE_alpha PF02002.12 gi|407464656|ref|YP_006775538.1| - 0.048 13.1 0.1 0.082 12.4 0.1 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit SKG6 PF08693.5 gi|407464656|ref|YP_006775538.1| - 0.12 11.7 1.7 0.27 10.5 1.2 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Mid2 PF04478.7 gi|407464657|ref|YP_006775539.1| - 8.8 5.7 7.2 8.6 5.7 0.0 2.4 2 1 0 2 2 2 0 Mid2 like cell wall stress sensor Cyc-maltodext_N PF09087.6 gi|407464658|ref|YP_006775540.1| - 0.0086 15.9 0.3 2.4 8.1 0.0 2.4 2 0 0 2 2 2 2 Cyclomaltodextrinase, N-terminal DUF4367 PF14285.1 gi|407464660|ref|YP_006775542.1| - 0.019 14.2 0.3 0.96 8.7 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4367) Cupredoxin_1 PF13473.1 gi|407464661|ref|YP_006775543.1| - 0.00032 20.5 0.0 0.00064 19.5 0.0 1.5 1 0 0 1 1 1 1 Cupredoxin-like domain Crl PF07417.7 gi|407464662|ref|YP_006775544.1| - 0.13 11.9 0.1 0.33 10.6 0.0 1.6 2 0 0 2 2 2 0 Transcriptional regulator Crl PepSY PF03413.14 gi|407464663|ref|YP_006775545.1| - 4.5e-05 24.0 0.7 0.0002 21.9 0.5 2.2 1 0 0 1 1 1 1 Peptidase propeptide and YPEB domain EMP70 PF02990.11 gi|407464663|ref|YP_006775545.1| - 0.052 12.0 1.9 0.077 11.4 1.3 1.2 1 0 0 1 1 1 0 Endomembrane protein 70 Cupredoxin_1 PF13473.1 gi|407464665|ref|YP_006775547.1| - 0.068 13.0 0.2 0.45 10.4 0.0 2.2 2 0 0 2 2 2 0 Cupredoxin-like domain ABM PF03992.11 gi|407464666|ref|YP_006775548.1| - 2e-06 27.7 0.2 7.5e-06 25.8 0.1 1.9 2 0 0 2 2 2 1 Antibiotic biosynthesis monooxygenase Dabb PF07876.7 gi|407464666|ref|YP_006775548.1| - 0.018 15.4 1.8 0.048 14.0 0.5 2.0 2 0 0 2 2 2 0 Stress responsive A/B Barrel Domain DUF1694 PF07997.6 gi|407464667|ref|YP_006775549.1| - 0.018 14.9 0.2 0.022 14.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1694) IFNGR1 PF07140.6 gi|407464667|ref|YP_006775549.1| - 0.098 12.3 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) CD24 PF14984.1 gi|407464668|ref|YP_006775550.1| - 0.047 13.4 0.3 0.091 12.5 0.2 1.4 1 0 0 1 1 1 0 CD24 protein DnaJ PF00226.26 gi|407464669|ref|YP_006775551.1| - 3.6e-23 81.0 1.5 3.6e-23 81.0 1.0 1.8 2 0 0 2 2 2 1 DnaJ domain Bromodomain PF00439.20 gi|407464669|ref|YP_006775551.1| - 0.032 14.1 0.2 0.058 13.3 0.2 1.6 1 1 0 1 1 1 0 Bromodomain Voldacs PF03517.8 gi|407464669|ref|YP_006775551.1| - 0.036 13.9 2.5 0.048 13.5 1.4 1.4 1 1 0 1 1 1 0 Regulator of volume decrease after cellular swelling O-ag_pol_Wzy PF14296.1 gi|407464669|ref|YP_006775551.1| - 0.17 10.4 0.6 0.21 10.1 0.4 1.1 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy HTH_AsnC-type PF13404.1 gi|407464670|ref|YP_006775552.1| - 1.2e-13 50.2 0.7 2.1e-13 49.5 0.5 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|407464670|ref|YP_006775552.1| - 1.8e-12 46.4 2.0 6.3e-12 44.6 0.9 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.16 gi|407464670|ref|YP_006775552.1| - 1.6e-11 43.7 0.1 3e-11 42.8 0.1 1.5 1 1 0 1 1 1 1 AsnC family HTH_11 PF08279.7 gi|407464670|ref|YP_006775552.1| - 7.8e-05 22.2 1.4 0.00012 21.6 0.5 1.7 2 0 0 2 2 2 1 HTH domain HxlR PF01638.12 gi|407464670|ref|YP_006775552.1| - 0.0026 17.3 0.2 0.0044 16.6 0.1 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_20 PF12840.2 gi|407464670|ref|YP_006775552.1| - 0.0035 17.1 0.1 0.0053 16.5 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.17 gi|407464670|ref|YP_006775552.1| - 0.0068 16.0 0.2 0.013 15.1 0.1 1.4 1 0 0 1 1 1 1 MarR family DUF294_C PF10335.4 gi|407464670|ref|YP_006775552.1| - 0.021 14.4 0.0 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase substrate binding domain HTH_23 PF13384.1 gi|407464670|ref|YP_006775552.1| - 0.022 14.3 0.8 0.64 9.7 0.2 2.4 1 1 1 2 2 2 0 Homeodomain-like domain RepL PF05732.6 gi|407464670|ref|YP_006775552.1| - 0.029 13.6 0.1 0.055 12.6 0.1 1.4 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_Crp_2 PF13545.1 gi|407464670|ref|YP_006775552.1| - 0.033 13.9 0.1 0.076 12.8 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MarR_2 PF12802.2 gi|407464670|ref|YP_006775552.1| - 0.034 13.8 0.2 0.06 13.0 0.2 1.4 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.1 gi|407464670|ref|YP_006775552.1| - 0.07 13.1 0.2 0.17 11.9 0.1 1.7 1 1 1 2 2 2 0 Helix-turn-helix domain Mga PF05043.8 gi|407464670|ref|YP_006775552.1| - 0.072 13.3 0.6 0.25 11.6 0.1 2.0 1 1 1 2 2 2 0 Mga helix-turn-helix domain HTH_10 PF04967.7 gi|407464670|ref|YP_006775552.1| - 0.1 12.1 0.2 0.18 11.3 0.2 1.4 1 0 0 1 1 1 0 HTH DNA binding domain FaeA PF04703.7 gi|407464670|ref|YP_006775552.1| - 0.11 12.7 0.2 0.2 11.8 0.1 1.4 1 0 0 1 1 1 0 FaeA-like protein HTH_9 PF08221.6 gi|407464670|ref|YP_006775552.1| - 0.14 12.0 0.4 0.45 10.4 0.1 1.8 1 1 1 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain FliS PF02561.9 gi|407464670|ref|YP_006775552.1| - 0.25 11.1 2.2 0.17 11.7 0.4 1.6 2 0 0 2 2 2 0 Flagellar protein FliS TPR_1 PF00515.23 gi|407464671|ref|YP_006775553.1| - 6.7e-17 60.3 0.0 1.8e-09 36.8 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.1 gi|407464671|ref|YP_006775553.1| - 7.9e-16 57.4 0.0 9.1e-16 57.2 0.0 1.0 1 0 0 1 1 1 1 TPR repeat TPR_2 PF07719.12 gi|407464671|ref|YP_006775553.1| - 1e-15 56.3 0.0 9.5e-08 31.4 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407464671|ref|YP_006775553.1| - 8.8e-11 40.7 0.0 2.2e-07 30.1 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407464671|ref|YP_006775553.1| - 9.9e-09 34.7 1.0 1.9e-06 27.6 0.1 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.1 gi|407464671|ref|YP_006775553.1| - 2.5e-08 33.6 0.0 2.8e-08 33.4 0.0 1.0 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407464671|ref|YP_006775553.1| - 4.3e-08 33.3 0.0 4.9e-08 33.1 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407464671|ref|YP_006775553.1| - 1.2e-07 31.6 0.0 5.3e-07 29.4 0.0 1.8 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407464671|ref|YP_006775553.1| - 3.3e-07 30.8 0.0 4e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407464671|ref|YP_006775553.1| - 1.1e-06 28.7 0.0 0.0029 18.0 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|407464671|ref|YP_006775553.1| - 5.2e-06 25.8 0.0 0.018 14.7 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.1 gi|407464671|ref|YP_006775553.1| - 0.00015 21.5 0.0 0.55 10.2 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat DUF3856 PF12968.2 gi|407464671|ref|YP_006775553.1| - 0.0041 16.9 0.0 0.0083 15.9 0.0 1.4 1 1 1 2 2 2 1 Domain of Unknown Function (DUF3856) Alkyl_sulf_dimr PF14863.1 gi|407464671|ref|YP_006775553.1| - 0.031 14.5 0.0 0.036 14.3 0.0 1.0 1 0 0 1 1 1 0 Alkyl sulfatase dimerisation Fis1_TPR_C PF14853.1 gi|407464671|ref|YP_006775553.1| - 0.032 14.1 0.0 0.14 12.0 0.0 1.9 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat Apc3 PF12895.2 gi|407464671|ref|YP_006775553.1| - 0.089 12.9 0.0 0.42 10.7 0.0 1.6 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_5 PF12688.2 gi|407464671|ref|YP_006775553.1| - 0.14 12.1 0.0 0.93 9.5 0.0 1.8 1 1 1 2 2 2 0 Tetratrico peptide repeat TPR_11 PF13414.1 gi|407464672|ref|YP_006775554.1| - 1.4e-25 88.6 8.6 1.1e-12 47.3 3.3 2.2 2 0 0 2 2 2 2 TPR repeat TPR_1 PF00515.23 gi|407464672|ref|YP_006775554.1| - 3.8e-25 86.3 14.3 6.7e-07 28.6 1.4 4.2 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407464672|ref|YP_006775554.1| - 4.7e-22 76.0 9.8 4e-05 23.2 0.1 4.2 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407464672|ref|YP_006775554.1| - 9.8e-20 70.7 3.5 1.1e-08 35.5 0.0 3.0 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407464672|ref|YP_006775554.1| - 1e-14 54.2 8.0 1e-08 34.9 1.8 2.8 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407464672|ref|YP_006775554.1| - 5.6e-13 48.2 0.5 0.0012 19.2 0.0 4.2 1 1 3 4 4 4 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|407464672|ref|YP_006775554.1| - 3.4e-11 43.1 15.1 5.4e-07 29.6 1.6 2.2 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.1 gi|407464672|ref|YP_006775554.1| - 2.3e-10 39.4 16.3 0.0022 17.6 0.1 4.4 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407464672|ref|YP_006775554.1| - 5.9e-10 39.3 11.6 0.0031 17.8 1.7 3.9 2 2 2 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|407464672|ref|YP_006775554.1| - 6.2e-10 38.1 3.7 0.18 11.7 0.0 4.4 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407464672|ref|YP_006775554.1| - 6.5e-10 38.4 6.8 0.00051 20.0 0.1 4.1 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.1 gi|407464672|ref|YP_006775554.1| - 6.6e-09 35.5 0.1 0.00028 20.6 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat MIT PF04212.13 gi|407464672|ref|YP_006775554.1| - 4.2e-07 29.7 11.7 0.59 10.0 0.7 4.4 4 1 0 4 4 4 3 MIT (microtubule interacting and transport) domain TPR_3 PF07720.7 gi|407464672|ref|YP_006775554.1| - 8.1e-07 28.7 7.4 0.16 11.7 0.4 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|407464672|ref|YP_006775554.1| - 0.00023 20.9 8.0 0.046 13.6 0.0 4.0 4 1 0 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.1 gi|407464672|ref|YP_006775554.1| - 0.00038 20.7 6.3 11 6.7 0.1 4.4 5 0 0 5 5 4 0 Tetratricopeptide repeat DUF627 PF04781.7 gi|407464672|ref|YP_006775554.1| - 0.00068 19.2 2.0 0.035 13.7 0.4 2.8 1 1 2 3 3 3 1 Protein of unknown function (DUF627) TPR_10 PF13374.1 gi|407464672|ref|YP_006775554.1| - 0.0029 17.4 0.1 6.3 6.8 0.0 3.9 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_5 PF12688.2 gi|407464672|ref|YP_006775554.1| - 0.0081 16.1 0.2 0.031 14.3 0.1 1.9 1 1 1 2 2 2 1 Tetratrico peptide repeat SHNi-TPR PF10516.4 gi|407464672|ref|YP_006775554.1| - 0.018 14.3 0.7 20 4.5 0.1 3.9 4 0 0 4 4 4 0 SHNi-TPR DDT PF02791.12 gi|407464672|ref|YP_006775554.1| - 0.13 12.0 0.0 1.7 8.4 0.0 2.5 1 1 1 2 2 2 0 DDT domain Lumazine_bd PF12870.2 gi|407464672|ref|YP_006775554.1| - 0.14 12.1 3.6 0.21 11.6 0.0 2.3 1 1 0 2 2 2 0 Lumazine-binding domain TPR_20 PF14561.1 gi|407464672|ref|YP_006775554.1| - 0.22 11.6 3.9 0.35 11.0 0.2 2.7 2 2 1 3 3 3 0 Tetratricopeptide repeat Sel1 PF08238.7 gi|407464672|ref|YP_006775554.1| - 0.4 11.3 2.5 2.5 8.8 0.0 2.9 3 0 0 3 3 2 0 Sel1 repeat DUF4363 PF14276.1 gi|407464672|ref|YP_006775554.1| - 0.52 10.0 7.6 3.1 7.5 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4363) Spectrin PF00435.16 gi|407464672|ref|YP_006775554.1| - 0.55 10.5 3.4 13 6.1 0.4 2.2 1 1 1 2 2 2 0 Spectrin repeat NSF PF02071.15 gi|407464672|ref|YP_006775554.1| - 2.9 8.8 5.3 2.6e+02 3.0 0.1 4.3 4 0 0 4 4 3 0 Aromatic-di-Alanine (AdAR) repeat zf-C2H2_jaz PF12171.3 gi|407464673|ref|YP_006775555.1| - 0.0012 18.8 0.7 0.0019 18.3 0.5 1.3 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2_4 PF13894.1 gi|407464673|ref|YP_006775555.1| - 0.0019 18.3 0.8 0.0027 17.8 0.5 1.2 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_2 PF12756.2 gi|407464673|ref|YP_006775555.1| - 0.0041 17.2 0.6 0.0047 16.9 0.4 1.1 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) Rad50_zn_hook PF04423.9 gi|407464673|ref|YP_006775555.1| - 0.0051 16.2 1.7 0.01 15.3 1.2 1.5 1 1 0 1 1 1 1 Rad50 zinc hook motif zf-C2H2 PF00096.21 gi|407464673|ref|YP_006775555.1| - 0.01 16.0 0.8 0.014 15.6 0.5 1.2 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_6 PF13912.1 gi|407464673|ref|YP_006775555.1| - 0.11 12.3 0.7 0.11 12.3 0.5 1.5 1 1 1 2 2 2 0 C2H2-type zinc finger Radical_SAM PF04055.16 gi|407464674|ref|YP_006775556.1| - 1e-15 58.2 0.0 1.8e-15 57.4 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily HTH_24 PF13412.1 gi|407464674|ref|YP_006775556.1| - 0.12 11.7 0.3 3 7.2 0.1 2.8 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding DUF77 PF01910.12 gi|407464675|ref|YP_006775557.1| - 8.6e-26 89.4 1.6 9.6e-26 89.2 1.1 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF77 MoaC PF01967.16 gi|407464675|ref|YP_006775557.1| - 0.053 13.1 0.6 0.062 12.9 0.4 1.1 1 0 0 1 1 1 0 MoaC family NanE PF04131.9 gi|407464675|ref|YP_006775557.1| - 0.064 12.2 1.3 0.073 12.0 0.9 1.1 1 0 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase Rnf-Nqr PF02508.9 gi|407464676|ref|YP_006775558.1| - 0.0065 16.0 0.1 0.0099 15.4 0.0 1.3 2 0 0 2 2 2 1 Rnf-Nqr subunit, membrane protein Tetraspannin PF00335.15 gi|407464676|ref|YP_006775558.1| - 0.018 14.3 1.6 0.024 13.9 1.1 1.0 1 0 0 1 1 1 0 Tetraspanin family DUF4345 PF14248.1 gi|407464676|ref|YP_006775558.1| - 0.033 13.6 0.1 0.045 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4345) TMEM51 PF15345.1 gi|407464676|ref|YP_006775558.1| - 0.046 13.4 0.0 0.054 13.1 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 DUF4097 PF13349.1 gi|407464676|ref|YP_006775558.1| - 0.069 12.6 1.9 1.6 8.2 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4097) DUF418 PF04235.7 gi|407464676|ref|YP_006775558.1| - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF418) PIRT PF15099.1 gi|407464676|ref|YP_006775558.1| - 0.16 11.2 2.1 3.3 6.9 1.4 2.0 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family DUF4064 PF13273.1 gi|407464676|ref|YP_006775558.1| - 0.49 10.5 4.8 4.9 7.3 3.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) Tad PF13400.1 gi|407464677|ref|YP_006775559.1| - 0.017 15.1 0.0 0.017 15.1 0.0 2.5 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Toxin_52 PF15605.1 gi|407464678|ref|YP_006775560.1| - 0.044 13.6 1.4 0.053 13.4 1.0 1.3 1 0 0 1 1 1 0 Putative toxin 52 Spectrin PF00435.16 gi|407464678|ref|YP_006775560.1| - 0.049 13.9 4.3 0.1 12.9 2.0 1.8 1 1 1 2 2 2 0 Spectrin repeat Fmp27_WPPW PF10359.4 gi|407464678|ref|YP_006775560.1| - 0.056 11.8 5.3 0.053 11.9 3.7 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain ADIP PF11559.3 gi|407464678|ref|YP_006775560.1| - 0.4 10.5 9.1 0.46 10.3 6.3 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding Vac_Fusion PF02346.11 gi|407464678|ref|YP_006775560.1| - 0.59 9.5 4.5 2 7.9 0.4 2.2 1 1 1 2 2 2 0 Chordopoxvirus fusion protein Exonuc_VII_L PF02601.10 gi|407464678|ref|YP_006775560.1| - 0.61 9.2 5.3 0.66 9.1 3.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF2951 PF11166.3 gi|407464678|ref|YP_006775560.1| - 0.74 9.7 5.6 1 9.2 3.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2951) DUF4316 PF14195.1 gi|407464678|ref|YP_006775560.1| - 1.1 9.4 9.0 7 6.8 4.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4316) IncA PF04156.9 gi|407464678|ref|YP_006775560.1| - 2 7.9 6.0 2 7.9 4.1 1.0 1 0 0 1 1 1 0 IncA protein DUF724 PF05266.9 gi|407464678|ref|YP_006775560.1| - 3.8 7.1 8.0 4.3 6.9 5.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Post_transc_reg PF13797.1 gi|407464679|ref|YP_006775561.1| - 0.065 12.8 0.2 0.082 12.5 0.1 1.2 1 0 0 1 1 1 0 Post-transcriptional regulator VitK2_biosynth PF02621.9 gi|407464680|ref|YP_006775562.1| - 7.3e-71 238.2 0.0 8.3e-71 238.1 0.0 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis SIS PF01380.17 gi|407464681|ref|YP_006775563.1| - 1.4e-06 27.9 2.4 0.0097 15.5 0.0 2.8 2 1 0 2 2 2 2 SIS domain GTP_EFTU PF00009.22 gi|407464682|ref|YP_006775564.1| - 4.4e-57 192.5 0.5 6.7e-57 191.9 0.4 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.13 gi|407464682|ref|YP_006775564.1| - 5.9e-26 90.3 0.0 1.8e-25 88.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.1 gi|407464682|ref|YP_006775564.1| - 3.4e-20 71.6 0.3 7.1e-20 70.6 0.2 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.19 gi|407464682|ref|YP_006775564.1| - 1.2e-18 66.6 0.0 4.6e-18 64.8 0.0 2.1 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.20 gi|407464682|ref|YP_006775564.1| - 2.4e-13 49.9 0.0 8e-13 48.3 0.0 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 Septin PF00735.13 gi|407464682|ref|YP_006775564.1| - 0.0092 15.0 0.1 0.015 14.3 0.0 1.2 1 0 0 1 1 1 1 Septin DUF4064 PF13273.1 gi|407464683|ref|YP_006775565.1| - 0.039 14.0 0.1 0.074 13.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) DUF912 PF06024.7 gi|407464683|ref|YP_006775565.1| - 0.054 13.5 0.3 0.26 11.3 0.1 1.9 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF912) DNA_pol_B_2 PF03175.8 gi|407464684|ref|YP_006775566.1| - 4.3e-21 75.1 27.8 3.2e-20 72.2 19.2 2.1 1 1 0 1 1 1 1 DNA polymerase type B, organellar and viral Vasohibin PF14822.1 gi|407464685|ref|YP_006775567.1| - 0.0046 16.0 1.1 0.0054 15.8 0.7 1.1 1 0 0 1 1 1 1 Vasohibin RasGAP_C PF03836.10 gi|407464685|ref|YP_006775567.1| - 0.033 13.8 3.1 0.63 9.7 0.1 2.1 2 0 0 2 2 2 0 RasGAP C-terminus FBP PF07299.6 gi|407464685|ref|YP_006775567.1| - 0.043 13.1 1.2 0.05 12.9 0.9 1.2 1 0 0 1 1 1 0 Fibronectin-binding protein (FBP) Cas_DxTHG PF09455.5 gi|407464685|ref|YP_006775567.1| - 0.047 12.8 2.1 0.056 12.5 1.5 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family DUF4561 PF15120.1 gi|407464685|ref|YP_006775567.1| - 0.051 13.0 0.0 0.057 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4561) Helicase_IV_N PF12462.3 gi|407464685|ref|YP_006775567.1| - 0.086 12.4 0.1 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal Baculo_p74_N PF08404.5 gi|407464685|ref|YP_006775567.1| - 0.24 10.1 2.6 1.2 7.8 1.7 1.8 1 1 0 1 1 1 0 Baculoviridae P74 N-terminal Vps39_2 PF10367.4 gi|407464685|ref|YP_006775567.1| - 0.3 11.2 1.4 5.4 7.2 1.0 2.0 1 1 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 Zn-ribbon_8 PF09723.5 gi|407464689|ref|YP_006775571.1| - 0.011 15.7 1.8 0.018 14.9 1.2 1.4 1 0 0 1 1 1 0 Zinc ribbon domain DUF123 PF01986.11 gi|407464689|ref|YP_006775571.1| - 0.05 13.7 1.6 0.07 13.2 1.1 1.3 1 1 0 1 1 1 0 Domain of unknown function DUF123 PyrI_C PF02748.10 gi|407464689|ref|YP_006775571.1| - 0.085 12.3 9.1 0.2 11.0 0.7 2.2 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain POLO_box PF00659.13 gi|407464689|ref|YP_006775571.1| - 0.11 12.4 0.9 0.19 11.7 0.2 1.6 1 1 1 2 2 2 0 POLO box duplicated region TAF1D PF15333.1 gi|407464689|ref|YP_006775571.1| - 0.17 11.6 1.8 0.2 11.4 1.2 1.0 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D TF_Zn_Ribbon PF08271.7 gi|407464689|ref|YP_006775571.1| - 0.18 11.1 2.7 0.41 10.0 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-BED PF02892.10 gi|407464689|ref|YP_006775571.1| - 0.24 11.2 6.0 0.25 11.1 0.9 2.4 1 1 1 2 2 2 0 BED zinc finger zf-CHCC PF10276.4 gi|407464689|ref|YP_006775571.1| - 0.26 11.1 7.0 1.3 8.9 0.8 2.4 2 0 0 2 2 2 0 Zinc-finger domain zf-ribbon_3 PF13248.1 gi|407464689|ref|YP_006775571.1| - 0.43 9.8 3.6 1 8.6 2.5 1.6 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|407464689|ref|YP_006775571.1| - 0.58 9.7 4.0 2.9 7.4 0.2 2.4 2 1 0 2 2 2 0 zinc-ribbon domain DUF2296 PF10058.4 gi|407464689|ref|YP_006775571.1| - 0.96 9.2 3.3 0.5 10.1 0.3 1.8 1 1 0 1 1 1 0 Predicted integral membrane metal-binding protein (DUF2296) Ribosomal_L44 PF00935.14 gi|407464689|ref|YP_006775571.1| - 7.8 6.5 9.7 0.19 11.7 0.9 2.2 1 1 1 2 2 2 0 Ribosomal protein L44 DUF2162 PF09930.4 gi|407464690|ref|YP_006775572.1| - 0.47 9.5 4.4 0.12 11.4 0.6 1.7 2 0 0 2 2 2 0 Predicted transporter (DUF2162) OppC_N PF12911.2 gi|407464690|ref|YP_006775572.1| - 0.6 9.5 3.1 2.7 7.4 0.1 2.6 2 1 1 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C MFS_1 PF07690.11 gi|407464691|ref|YP_006775573.1| - 0.08 11.6 4.3 0.091 11.4 3.0 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily Cas_Cas1 PF01867.11 gi|407464693|ref|YP_006775575.1| - 4.2e-45 153.9 0.4 6.6e-44 150.0 0.3 2.1 1 1 0 1 1 1 1 CRISPR associated protein Cas1 Tox-HNH-HHH PF15637.1 gi|407464693|ref|YP_006775575.1| - 0.092 12.5 1.2 1.3 8.7 0.1 2.5 2 0 0 2 2 2 0 HNH/Endo VII superfamily nuclease toxin with a HHH motif DUF1035 PF06281.7 gi|407464694|ref|YP_006775576.1| - 0.0051 16.5 1.1 0.0086 15.8 0.2 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF1035) DUF1673 PF07895.6 gi|407464694|ref|YP_006775576.1| - 0.0056 16.2 2.6 0.0056 16.2 1.8 2.4 1 1 2 3 3 3 2 Protein of unknown function (DUF1673) RseC_MucC PF04246.7 gi|407464694|ref|YP_006775576.1| - 8.1 6.0 6.0 8.3 5.9 0.5 2.4 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC ApoLp-III PF07464.6 gi|407464695|ref|YP_006775577.1| - 4.4e-06 26.7 4.0 6.1e-05 23.0 1.0 2.0 1 1 1 2 2 2 1 Apolipophorin-III precursor (apoLp-III) Glyco_hydro_38C PF07748.8 gi|407464695|ref|YP_006775577.1| - 0.015 14.1 2.4 0.015 14.0 1.6 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal domain PMEI PF04043.10 gi|407464695|ref|YP_006775577.1| - 0.025 14.4 0.8 0.091 12.6 0.5 1.8 1 1 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor Transgly PF00912.17 gi|407464695|ref|YP_006775577.1| - 0.036 13.3 0.4 0.043 13.1 0.3 1.3 1 0 0 1 1 1 0 Transglycosylase Phasin_2 PF09361.5 gi|407464695|ref|YP_006775577.1| - 0.037 14.0 9.5 0.21 11.6 2.5 2.4 1 1 0 2 2 2 0 Phasin protein FAD-SLDH PF12318.3 gi|407464695|ref|YP_006775577.1| - 0.058 13.0 1.4 0.077 12.6 0.9 1.3 1 1 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase CLASP_N PF12348.3 gi|407464695|ref|YP_006775577.1| - 0.065 12.5 2.9 0.084 12.2 2.0 1.3 1 0 0 1 1 1 0 CLASP N terminal Dynein_light PF01221.13 gi|407464695|ref|YP_006775577.1| - 0.081 12.9 4.2 2.7 8.0 0.3 2.4 2 1 0 2 2 2 0 Dynein light chain type 1 TyeA PF09059.5 gi|407464695|ref|YP_006775577.1| - 0.096 12.6 0.3 0.61 10.0 0.0 2.1 2 1 0 2 2 2 0 TyeA RICH PF05062.7 gi|407464695|ref|YP_006775577.1| - 0.13 12.3 2.8 0.67 10.1 0.2 2.4 2 0 0 2 2 2 0 RICH domain Tape_meas_lam_C PF09718.5 gi|407464695|ref|YP_006775577.1| - 0.16 11.8 3.7 0.74 9.7 0.1 2.3 2 0 0 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) CCDC84 PF14968.1 gi|407464695|ref|YP_006775577.1| - 1.1 8.6 5.5 1.3 8.4 3.8 1.0 1 0 0 1 1 1 0 Coiled coil protein 84 DUF1477 PF07346.6 gi|407464695|ref|YP_006775577.1| - 4.6 7.3 7.6 0.84 9.6 0.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1477) Penicillinase_R PF03965.11 gi|407464696|ref|YP_006775578.1| - 0.00062 19.8 0.3 0.001 19.1 0.2 1.4 1 0 0 1 1 1 1 Penicillinase repressor Hydantoinase_B PF02538.9 gi|407464696|ref|YP_006775578.1| - 0.045 11.9 0.6 0.052 11.7 0.4 1.1 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase RGS PF00615.14 gi|407464696|ref|YP_006775578.1| - 0.16 12.1 1.1 0.48 10.5 0.4 2.0 1 1 1 2 2 2 0 Regulator of G protein signaling domain Glycoprotein_B PF00606.13 gi|407464697|ref|YP_006775579.1| - 0.11 10.5 0.0 0.12 10.3 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus Glycoprotein B DUF327 PF03885.8 gi|407464698|ref|YP_006775580.1| - 0.036 13.9 0.4 0.039 13.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF327) DUF2666 PF10869.3 gi|407464698|ref|YP_006775580.1| - 0.038 14.0 1.3 0.09 12.8 0.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2666) Uteroglobin PF01099.12 gi|407464699|ref|YP_006775581.1| - 0.00023 20.8 0.1 0.0005 19.8 0.0 1.6 1 0 0 1 1 1 1 Uteroglobin family Syntaxin_2 PF14523.1 gi|407464699|ref|YP_006775581.1| - 0.04 13.9 0.8 0.077 13.0 0.4 1.6 2 1 0 2 2 2 0 Syntaxin-like protein Sin3_corepress PF08295.7 gi|407464699|ref|YP_006775581.1| - 0.13 12.0 0.8 0.28 10.9 0.2 1.8 1 1 0 1 1 1 0 Sin3 family co-repressor zf-LITAF-like PF10601.4 gi|407464700|ref|YP_006775582.1| - 0.081 12.7 1.1 0.1 12.4 0.8 1.1 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain RNHCP PF12647.2 gi|407464700|ref|YP_006775582.1| - 0.57 10.0 2.3 1.3 8.9 0.2 2.0 1 1 1 2 2 2 0 RNHCP domain Auto_anti-p27 PF06677.7 gi|407464700|ref|YP_006775582.1| - 1.8 8.4 4.6 7.5 6.4 0.3 2.4 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) PepSY_TM_3 PF13706.1 gi|407464701|ref|YP_006775583.1| - 0.0074 15.6 4.8 0.4 10.1 0.8 2.2 2 0 0 2 2 2 2 PepSY-associated TM helix Ycf66_N PF07444.6 gi|407464701|ref|YP_006775583.1| - 0.15 11.7 0.9 1.3 8.7 0.0 2.2 1 1 0 2 2 2 0 Ycf66 protein N-terminus DUF4405 PF14358.1 gi|407464701|ref|YP_006775583.1| - 0.34 11.0 5.0 0.53 10.4 2.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4405) NfeD PF01957.13 gi|407464701|ref|YP_006775583.1| - 1.4 9.0 4.4 2.6 8.1 3.0 1.5 1 1 0 1 1 1 0 NfeD-like C-terminal, partner-binding MtN3_slv PF03083.11 gi|407464701|ref|YP_006775583.1| - 1.5 8.7 4.4 11 5.9 3.2 2.0 1 1 0 1 1 1 0 Sugar efflux transporter for intercellular exchange DUF3784 PF12650.2 gi|407464701|ref|YP_006775583.1| - 2.3 8.2 5.8 7.6 6.5 4.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3784) TPT PF03151.11 gi|407464701|ref|YP_006775583.1| - 2.4 7.7 5.3 1.7 8.2 0.4 2.0 2 0 0 2 2 2 0 Triose-phosphate Transporter family DUF3185 PF11381.3 gi|407464701|ref|YP_006775583.1| - 2.7 7.8 9.0 6.2 6.6 6.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3185) PepSY_TM PF03929.11 gi|407464701|ref|YP_006775583.1| - 6.4 7.3 7.9 8.7 6.9 0.7 2.8 2 1 0 2 2 2 0 PepSY-associated TM helix Copper-bind PF00127.15 gi|407464702|ref|YP_006775584.1| - 3.1e-05 24.1 0.0 6.5e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Methyltransf_3 PF01596.12 gi|407464704|ref|YP_006775586.1| - 5.4e-34 117.0 0.8 8.5e-34 116.4 0.6 1.3 1 1 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.1 gi|407464704|ref|YP_006775586.1| - 1.9e-15 57.5 0.0 2.8e-15 57.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|407464704|ref|YP_006775586.1| - 3.7e-08 33.9 0.0 6e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|407464704|ref|YP_006775586.1| - 5.4e-08 32.5 0.2 7.6e-08 32.0 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|407464704|ref|YP_006775586.1| - 2.3e-06 27.3 0.0 3.6e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CmcI PF04989.7 gi|407464704|ref|YP_006775586.1| - 6.5e-06 25.6 0.1 9e-06 25.1 0.1 1.2 1 0 0 1 1 1 1 Cephalosporin hydroxylase GCD14 PF08704.5 gi|407464704|ref|YP_006775586.1| - 0.0037 16.8 0.0 0.0049 16.3 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_15 PF09445.5 gi|407464704|ref|YP_006775586.1| - 0.0058 16.1 0.1 0.008 15.7 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase DUF1442 PF07279.6 gi|407464704|ref|YP_006775586.1| - 0.0087 15.1 0.0 0.012 14.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1442) Cons_hypoth95 PF03602.10 gi|407464704|ref|YP_006775586.1| - 0.014 14.8 0.1 0.024 14.0 0.0 1.4 2 0 0 2 2 2 0 Conserved hypothetical protein 95 Met_10 PF02475.11 gi|407464704|ref|YP_006775586.1| - 0.051 13.1 0.3 0.08 12.5 0.2 1.5 1 1 0 1 1 1 0 Met-10+ like-protein TrkA_N PF02254.13 gi|407464704|ref|YP_006775586.1| - 0.053 13.5 0.5 0.27 11.2 0.4 2.0 1 1 1 2 2 2 0 TrkA-N domain UPF0020 PF01170.13 gi|407464704|ref|YP_006775586.1| - 0.065 12.8 0.1 0.3 10.6 0.1 1.9 2 1 0 2 2 2 0 Putative RNA methylase family UPF0020 MTS PF05175.9 gi|407464704|ref|YP_006775586.1| - 0.085 12.2 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain RepA_N PF06970.6 gi|407464704|ref|YP_006775586.1| - 0.086 12.6 0.2 0.19 11.5 0.2 1.6 1 0 0 1 1 1 0 Replication initiator protein A (RepA) N-terminus Methyltransf_26 PF13659.1 gi|407464704|ref|YP_006775586.1| - 0.089 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.15 gi|407464704|ref|YP_006775586.1| - 0.11 11.5 0.0 0.15 11.1 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DUF1926 PF09095.6 gi|407464706|ref|YP_006775588.1| - 0.062 12.5 0.8 0.064 12.4 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1926) Stork_head PF10264.4 gi|407464708|ref|YP_006775590.1| - 0.013 15.6 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix Storkhead-box1 domain DUF4164 PF13747.1 gi|407464708|ref|YP_006775590.1| - 0.038 14.1 0.2 0.044 13.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) U1snRNP70_N PF12220.3 gi|407464708|ref|YP_006775590.1| - 0.083 13.2 0.8 0.091 13.1 0.6 1.1 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal DUF2951 PF11166.3 gi|407464708|ref|YP_006775590.1| - 0.11 12.3 3.9 1.3 8.9 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) DUF1911 PF08929.5 gi|407464708|ref|YP_006775590.1| - 0.12 13.0 0.1 0.12 13.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1911) HSA PF07529.8 gi|407464708|ref|YP_006775590.1| - 0.2 11.4 2.9 0.29 10.9 2.0 1.3 1 0 0 1 1 1 0 HSA PrsW-protease PF13367.1 gi|407464709|ref|YP_006775591.1| - 0.042 13.0 0.3 0.048 12.8 0.2 1.2 1 0 0 1 1 1 0 Protease prsW family Bac_Ubq_Cox PF01654.12 gi|407464709|ref|YP_006775591.1| - 0.078 11.3 0.2 0.098 11.0 0.1 1.0 1 0 0 1 1 1 0 Bacterial Cytochrome Ubiquinol Oxidase Mut7-C PF01927.11 gi|407464711|ref|YP_006775593.1| - 5.7e-07 29.6 0.1 6e-07 29.5 0.1 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain Fcf1 PF04900.7 gi|407464711|ref|YP_006775593.1| - 0.0021 18.1 0.0 0.0024 17.9 0.0 1.1 1 0 0 1 1 1 1 Fcf1 PIN PF01850.16 gi|407464711|ref|YP_006775593.1| - 0.016 15.5 0.0 0.029 14.7 0.0 1.5 1 1 0 1 1 1 0 PIN domain RNase_Zc3h12a PF11977.3 gi|407464711|ref|YP_006775593.1| - 0.018 14.8 0.0 0.019 14.7 0.0 1.1 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain DUF4411 PF14367.1 gi|407464711|ref|YP_006775593.1| - 0.031 14.0 0.0 0.034 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4411) DUF562 PF04763.7 gi|407464711|ref|YP_006775593.1| - 0.037 13.2 0.0 0.045 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF562) HxlR PF01638.12 gi|407464712|ref|YP_006775594.1| - 0.0052 16.3 1.0 0.02 14.5 0.3 2.0 2 0 0 2 2 2 1 HxlR-like helix-turn-helix DUF1825 PF08855.5 gi|407464712|ref|YP_006775594.1| - 0.017 15.1 3.5 0.057 13.4 1.4 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF1825) Ku_PK_bind PF08785.6 gi|407464712|ref|YP_006775594.1| - 0.024 14.5 2.3 0.057 13.3 1.6 1.6 1 0 0 1 1 1 0 Ku C terminal domain like Porphobil_deam PF01379.15 gi|407464712|ref|YP_006775594.1| - 0.034 13.0 0.1 0.066 12.1 0.1 1.5 1 1 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain Prefoldin_2 PF01920.15 gi|407464712|ref|YP_006775594.1| - 0.05 13.3 1.6 0.62 9.8 0.2 2.5 2 0 0 2 2 2 0 Prefoldin subunit V_ATPase_I PF01496.14 gi|407464712|ref|YP_006775594.1| - 0.074 10.9 7.4 0.079 10.8 5.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HTH_24 PF13412.1 gi|407464712|ref|YP_006775594.1| - 0.086 12.2 0.5 0.39 10.1 0.1 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding MitMem_reg PF13012.1 gi|407464712|ref|YP_006775594.1| - 0.096 12.7 2.4 0.78 9.8 1.4 2.4 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function Syntaxin-6_N PF09177.6 gi|407464712|ref|YP_006775594.1| - 0.34 11.3 3.7 0.3 11.5 1.6 1.7 2 0 0 2 2 2 0 Syntaxin 6, N-terminal Fis1_TPR_N PF14852.1 gi|407464713|ref|YP_006775595.1| - 0.084 12.1 0.2 0.13 11.5 0.1 1.3 1 0 0 1 1 1 0 Fis1 N-terminal tetratricopeptide repeat DUF1206 PF06724.6 gi|407464715|ref|YP_006775597.1| - 0.043 13.5 0.2 0.043 13.5 0.2 2.8 3 0 0 3 3 3 0 Domain of Unknown Function (DUF1206) DUF3290 PF11694.3 gi|407464715|ref|YP_006775597.1| - 0.18 11.5 1.5 0.95 9.1 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) TrkH PF02386.11 gi|407464716|ref|YP_006775598.1| - 1.1e-26 93.2 35.6 6.9e-23 80.7 14.9 3.7 1 1 1 2 2 2 2 Cation transport protein CBS PF00571.23 gi|407464716|ref|YP_006775598.1| - 4.4e-21 74.3 2.9 2.3e-11 43.2 0.0 2.5 2 0 0 2 2 2 2 CBS domain CAAD PF14159.1 gi|407464716|ref|YP_006775598.1| - 0.0012 18.4 4.3 0.011 15.3 0.1 3.9 3 1 0 3 3 3 1 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DNase-RNase PF02577.9 gi|407464717|ref|YP_006775599.1| - 3.2e-07 29.6 0.0 3.5e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Bifunctional nuclease DUF4060 PF13269.1 gi|407464717|ref|YP_006775599.1| - 0.14 12.1 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4060) TBPIP PF07106.8 gi|407464719|ref|YP_006775601.1| - 0.018 14.5 1.3 0.019 14.5 0.9 1.0 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Syntaxin PF00804.20 gi|407464719|ref|YP_006775601.1| - 0.033 14.3 0.9 0.041 14.0 0.6 1.2 1 0 0 1 1 1 0 Syntaxin Toxin_52 PF15605.1 gi|407464719|ref|YP_006775601.1| - 0.048 13.5 0.2 0.055 13.3 0.1 1.0 1 0 0 1 1 1 0 Putative toxin 52 Ax_dynein_light PF10211.4 gi|407464719|ref|YP_006775601.1| - 0.056 13.2 0.8 0.056 13.2 0.5 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain Cep57_MT_bd PF06657.8 gi|407464719|ref|YP_006775601.1| - 0.07 13.0 0.2 0.084 12.8 0.2 1.2 1 0 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 DUF3688 PF12461.3 gi|407464720|ref|YP_006775602.1| - 0.059 13.7 0.0 0.075 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3688) zinc_ribbon_5 PF13719.1 gi|407464722|ref|YP_006775604.1| - 0.0035 16.8 1.6 0.0083 15.6 1.1 1.6 1 1 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|407464722|ref|YP_006775604.1| - 0.0036 16.9 1.8 0.0087 15.7 1.2 1.7 1 1 0 1 1 1 1 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|407464722|ref|YP_006775604.1| - 0.0086 16.3 0.0 0.011 16.0 0.0 1.1 1 0 0 1 1 1 1 Restriction alleviation protein Lar zf-FPG_IleRS PF06827.9 gi|407464722|ref|YP_006775604.1| - 0.018 14.6 1.0 2.2 8.0 0.1 2.3 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS TF_Zn_Ribbon PF08271.7 gi|407464722|ref|YP_006775604.1| - 0.048 13.0 0.6 0.08 12.2 0.4 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding DUF2387 PF09526.5 gi|407464722|ref|YP_006775604.1| - 0.057 13.3 0.3 0.075 12.9 0.2 1.3 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) FdhE PF04216.7 gi|407464722|ref|YP_006775604.1| - 0.1 12.3 0.3 0.12 12.0 0.2 1.0 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation DZR PF12773.2 gi|407464722|ref|YP_006775604.1| - 0.11 12.3 1.4 0.2 11.4 1.0 1.4 1 1 0 1 1 1 0 Double zinc ribbon zf-CHY PF05495.7 gi|407464722|ref|YP_006775604.1| - 0.13 12.4 0.7 0.39 10.9 0.5 1.6 1 1 0 1 1 1 0 CHY zinc finger DUF3268 PF11672.3 gi|407464722|ref|YP_006775604.1| - 0.13 12.3 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3268) Gin PF10764.4 gi|407464722|ref|YP_006775604.1| - 1.1 8.9 3.8 6.9 6.4 0.2 2.3 2 1 0 2 2 2 0 Inhibitor of sigma-G Gin DUF4182 PF13790.1 gi|407464722|ref|YP_006775604.1| - 1.7 8.4 5.5 0.3 10.9 0.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4182) DUF1297 PF06973.7 gi|407464723|ref|YP_006775605.1| - 5.8e-74 247.4 0.1 8.2e-74 246.9 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|407464723|ref|YP_006775605.1| - 1.6e-47 160.3 0.0 3e-47 159.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) Flavoprotein PF02441.14 gi|407464724|ref|YP_006775606.1| - 2.4e-31 108.1 0.4 3.2e-31 107.6 0.3 1.1 1 0 0 1 1 1 1 Flavoprotein Polyketide_cyc PF03364.15 gi|407464725|ref|YP_006775607.1| - 0.00027 20.9 0.0 0.00059 19.8 0.0 1.6 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport MttA_Hcf106 PF02416.11 gi|407464726|ref|YP_006775608.1| - 2.5e-10 39.3 7.1 5.1e-10 38.3 4.9 1.5 1 1 0 1 1 1 1 mttA/Hcf106 family DUF3974 PF13120.1 gi|407464726|ref|YP_006775608.1| - 0.056 13.2 0.0 0.06 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) SHR3_chaperone PF08229.6 gi|407464726|ref|YP_006775608.1| - 0.12 11.2 0.1 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 ER membrane protein SH3 Mt_ATP-synt_B PF05405.9 gi|407464726|ref|YP_006775608.1| - 0.15 11.5 1.6 0.28 10.6 1.1 1.4 1 1 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) TatC PF00902.13 gi|407464727|ref|YP_006775609.1| - 1.7e-59 200.8 15.2 2e-59 200.5 10.5 1.0 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) LrgA PF03788.9 gi|407464727|ref|YP_006775609.1| - 0.051 13.2 0.7 0.051 13.2 0.5 3.4 2 2 1 3 3 3 0 LrgA family PurS PF02700.9 gi|407464729|ref|YP_006775611.1| - 6.6e-21 74.0 0.3 7.3e-21 73.9 0.2 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase DUF3713 PF12506.3 gi|407464729|ref|YP_006775611.1| - 0.074 13.1 0.8 0.08 13.0 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3713) GATase_5 PF13507.1 gi|407464730|ref|YP_006775612.1| - 3.7e-42 144.0 0.0 1e-41 142.5 0.0 1.6 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.9 gi|407464730|ref|YP_006775612.1| - 1e-09 38.2 0.1 7.5e-09 35.3 0.0 2.1 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.23 gi|407464730|ref|YP_006775612.1| - 1.8e-09 37.3 0.0 2.8e-09 36.6 0.0 1.3 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DUF4066 PF13278.1 gi|407464730|ref|YP_006775612.1| - 5.8e-06 25.6 0.0 8.8e-06 25.0 0.0 1.2 1 0 0 1 1 1 1 Putative amidotransferase DJ-1_PfpI PF01965.19 gi|407464730|ref|YP_006775612.1| - 6.9e-06 25.5 0.0 9.9e-06 25.0 0.0 1.3 1 1 0 1 1 1 1 DJ-1/PfpI family Peptidase_C26 PF07722.8 gi|407464730|ref|YP_006775612.1| - 0.0025 17.2 0.2 0.0084 15.5 0.1 1.7 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.14 gi|407464730|ref|YP_006775612.1| - 0.015 14.9 0.0 0.079 12.5 0.0 1.9 2 0 0 2 2 2 0 SNO glutamine amidotransferase family AIRS_C PF02769.17 gi|407464731|ref|YP_006775613.1| - 1.9e-50 170.8 0.4 2.3e-26 92.6 0.3 2.2 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|407464731|ref|YP_006775613.1| - 4.2e-39 132.6 0.2 8.8e-22 77.1 0.2 2.6 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain DUF3408 PF11888.3 gi|407464732|ref|YP_006775614.1| - 0.09 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) GATase_2 PF00310.16 gi|407464733|ref|YP_006775615.1| - 4.7e-19 68.3 0.0 7.9e-11 41.2 0.0 3.1 1 1 2 3 3 3 3 Glutamine amidotransferases class-II GATase_6 PF13522.1 gi|407464733|ref|YP_006775615.1| - 1.5e-16 60.5 0.0 4.6e-16 58.9 0.0 1.8 3 0 0 3 3 3 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|407464733|ref|YP_006775615.1| - 1.2e-13 50.8 0.0 2.3e-13 49.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.22 gi|407464733|ref|YP_006775615.1| - 3.3e-13 49.4 0.1 1.1e-12 47.7 0.0 1.9 2 0 0 2 2 2 1 Phosphoribosyl transferase domain GATase_4 PF13230.1 gi|407464733|ref|YP_006775615.1| - 9.7e-06 24.4 0.0 1.9e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferases class-II PRTase_3 PF15610.1 gi|407464733|ref|YP_006775615.1| - 0.074 11.9 0.0 0.11 11.3 0.0 1.2 1 0 0 1 1 1 0 PRTase ComF-like DUF427 PF04248.7 gi|407464734|ref|YP_006775616.1| - 2.8e-28 97.4 0.3 3.3e-28 97.2 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF427) Epsilon_antitox PF08998.6 gi|407464735|ref|YP_006775617.1| - 0.029 14.3 0.1 0.031 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial epsilon antitoxin AAA_13 PF13166.1 gi|407464735|ref|YP_006775617.1| - 0.039 12.4 2.4 0.043 12.2 1.7 1.0 1 0 0 1 1 1 0 AAA domain XPC-binding PF09280.6 gi|407464735|ref|YP_006775617.1| - 0.063 12.7 0.0 0.087 12.2 0.0 1.3 1 0 0 1 1 1 0 XPC-binding domain Glycos_transf_2 PF00535.21 gi|407464735|ref|YP_006775617.1| - 0.075 12.7 0.2 0.094 12.3 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF2383 PF09537.5 gi|407464735|ref|YP_006775617.1| - 0.1 12.8 0.6 0.12 12.6 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2383) Methyltransf_4 PF02390.12 gi|407464735|ref|YP_006775617.1| - 0.11 11.5 0.8 0.12 11.3 0.5 1.0 1 0 0 1 1 1 0 Putative methyltransferase ISG65-75 PF11727.3 gi|407464735|ref|YP_006775617.1| - 0.12 11.3 1.2 0.14 11.1 0.8 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein DUF4407 PF14362.1 gi|407464735|ref|YP_006775617.1| - 0.3 9.9 1.2 0.32 9.9 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMF_DNA_bd PF12329.3 gi|407464735|ref|YP_006775617.1| - 1.4 8.8 6.6 18 5.2 4.6 2.1 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding HATPase_c PF02518.21 gi|407464736|ref|YP_006775618.1| - 4.3e-22 77.9 0.2 1.9e-21 75.8 0.1 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|407464736|ref|YP_006775618.1| - 4e-12 45.9 0.4 1.1e-11 44.5 0.3 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.1 gi|407464736|ref|YP_006775618.1| - 7.2e-08 32.0 0.3 2.6e-07 30.2 0.2 2.0 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.1 gi|407464736|ref|YP_006775618.1| - 0.00031 20.4 0.5 0.00071 19.2 0.1 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PilJ PF13675.1 gi|407464736|ref|YP_006775618.1| - 0.0069 16.6 0.0 0.03 14.6 0.0 2.0 2 0 0 2 2 2 1 Type IV pili methyl-accepting chemotaxis transducer N-term GDPD PF03009.12 gi|407464736|ref|YP_006775618.1| - 0.36 10.3 2.0 0.57 9.6 0.3 1.9 1 1 1 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family Exonuc_VII_L PF02601.10 gi|407464736|ref|YP_006775618.1| - 0.75 8.9 6.6 0.12 11.5 0.4 2.0 2 0 0 2 2 2 0 Exonuclease VII, large subunit SAICAR_synt PF01259.13 gi|407464737|ref|YP_006775619.1| - 4e-70 235.7 0.2 4.9e-70 235.4 0.2 1.0 1 0 0 1 1 1 1 SAICAR synthetase HTH_20 PF12840.2 gi|407464738|ref|YP_006775620.1| - 1.1e-08 34.7 0.1 2.5e-08 33.5 0.2 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|407464738|ref|YP_006775620.1| - 1e-05 25.0 0.4 8.9e-05 22.0 0.3 2.2 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_12 PF08461.5 gi|407464738|ref|YP_006775620.1| - 7.8e-05 22.3 0.3 0.00016 21.2 0.2 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain FUR PF01475.14 gi|407464738|ref|YP_006775620.1| - 0.0011 18.9 0.4 0.0019 18.1 0.3 1.7 1 1 0 1 1 1 1 Ferric uptake regulator family Replic_Relax PF13814.1 gi|407464738|ref|YP_006775620.1| - 0.0032 17.3 0.0 0.0048 16.7 0.0 1.4 1 0 0 1 1 1 1 Replication-relaxation DUF2004 PF09406.5 gi|407464738|ref|YP_006775620.1| - 0.021 14.8 0.2 0.049 13.6 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2004) Rep_fac_C PF08542.6 gi|407464738|ref|YP_006775620.1| - 0.041 13.8 1.9 1.4 8.9 0.2 2.9 2 2 0 2 2 2 0 Replication factor C C-terminal domain Pyridox_oxidase PF01243.15 gi|407464739|ref|YP_006775621.1| - 1.3e-14 53.9 0.0 1.7e-14 53.6 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|407464739|ref|YP_006775621.1| - 0.0078 16.0 0.0 0.014 15.2 0.0 1.5 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF4352 PF11611.3 gi|407464741|ref|YP_006775623.1| - 8.3e-13 48.5 0.5 1e-12 48.2 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4352) tRNA_deacylase PF04414.7 gi|407464741|ref|YP_006775623.1| - 0.047 12.8 0.1 0.058 12.5 0.1 1.2 1 0 0 1 1 1 0 D-aminoacyl-tRNA deacylase PM0188 PF11477.3 gi|407464741|ref|YP_006775623.1| - 0.074 11.8 0.1 0.11 11.3 0.1 1.2 1 0 0 1 1 1 0 Sialyltransferase PMO188 Tropomodulin PF03250.9 gi|407464741|ref|YP_006775623.1| - 0.14 11.6 0.2 0.26 10.7 0.1 1.4 1 1 0 1 1 1 0 Tropomodulin Na_H_antiporter PF03553.9 gi|407464743|ref|YP_006775625.1| - 0.092 11.7 0.1 0.1 11.6 0.1 1.0 1 0 0 1 1 1 0 Na+/H+ antiporter family DUF2299 PF10061.4 gi|407464744|ref|YP_006775626.1| - 1.6e-05 24.3 0.2 1.9e-05 24.1 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2299) Crp PF00325.15 gi|407464744|ref|YP_006775626.1| - 0.016 14.6 0.0 0.041 13.3 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family Bac_Ubq_Cox PF01654.12 gi|407464745|ref|YP_006775627.1| - 0.005 15.3 0.0 0.0057 15.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial Cytochrome Ubiquinol Oxidase Cyto_ox_2 PF02322.10 gi|407464745|ref|YP_006775627.1| - 0.013 14.6 0.0 0.013 14.6 0.0 1.0 1 0 0 1 1 1 0 Cytochrome oxidase subunit II DUF3816 PF12822.2 gi|407464745|ref|YP_006775627.1| - 0.015 15.2 0.4 0.017 15.0 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3816) DUF4257 PF14074.1 gi|407464745|ref|YP_006775627.1| - 0.015 14.9 0.9 0.028 14.0 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4257) DUF4064 PF13273.1 gi|407464745|ref|YP_006775627.1| - 0.035 14.2 1.3 0.048 13.7 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) DUF2207 PF09972.4 gi|407464745|ref|YP_006775627.1| - 0.043 12.4 0.9 0.046 12.3 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Choline_transpo PF04515.7 gi|407464745|ref|YP_006775627.1| - 0.055 12.2 0.1 0.062 12.0 0.1 1.0 1 0 0 1 1 1 0 Plasma-membrane choline transporter 7TM_GPCR_Str PF10326.4 gi|407464745|ref|YP_006775627.1| - 0.11 11.6 0.9 0.12 11.4 0.1 1.5 1 1 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Str UPF0640 PF15114.1 gi|407464745|ref|YP_006775627.1| - 0.12 11.8 0.6 0.22 11.0 0.4 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0640 DUF2407_C PF13373.1 gi|407464745|ref|YP_006775627.1| - 0.14 12.0 0.5 0.2 11.5 0.3 1.3 1 1 0 1 1 1 0 DUF2407 C-terminal domain 5TM-5TMR_LYT PF07694.7 gi|407464745|ref|YP_006775627.1| - 0.48 9.7 4.1 0.43 9.8 0.2 1.9 1 1 1 2 2 2 0 5TMR of 5TMR-LYT DZR PF12773.2 gi|407464746|ref|YP_006775628.1| - 0.0041 16.8 0.2 0.006 16.3 0.1 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-IS66 PF13005.2 gi|407464746|ref|YP_006775628.1| - 0.009 15.9 0.4 1.2 9.2 0.1 2.5 2 0 0 2 2 2 1 zinc-finger binding domain of transposase IS66 DNA_RNApol_7kD PF03604.8 gi|407464746|ref|YP_006775628.1| - 0.036 13.5 2.0 1.9 8.0 0.3 2.5 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit C1_4 PF07975.7 gi|407464746|ref|YP_006775628.1| - 0.038 14.0 0.1 3.5 7.7 0.0 2.2 2 0 0 2 2 2 0 TFIIH C1-like domain Zn_ribbon_recom PF13408.1 gi|407464746|ref|YP_006775628.1| - 0.048 13.9 0.0 0.068 13.4 0.0 1.2 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain zf-HYPF PF07503.7 gi|407464746|ref|YP_006775628.1| - 0.063 12.7 1.3 2.3 7.7 0.1 2.4 2 0 0 2 2 2 0 HypF finger Zn-ribbon_8 PF09723.5 gi|407464746|ref|YP_006775628.1| - 0.074 13.0 0.4 1.2 9.1 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain DUF35_N PF12172.3 gi|407464746|ref|YP_006775628.1| - 0.12 12.2 2.2 3.2 7.7 0.2 2.2 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-C2H2 PF00096.21 gi|407464746|ref|YP_006775628.1| - 0.28 11.6 1.2 3.5 8.1 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-LYAR PF08790.6 gi|407464746|ref|YP_006775628.1| - 0.4 10.4 3.0 8.4 6.1 0.3 2.3 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger Ribosomal_L6 PF00347.18 gi|407464748|ref|YP_006775630.1| - 9.3e-14 51.6 7.7 1.1e-08 35.4 0.7 2.2 2 0 0 2 2 2 2 Ribosomal protein L6 BON PF04972.12 gi|407464748|ref|YP_006775630.1| - 0.0015 18.2 4.5 3.7 7.3 0.0 4.5 4 1 1 5 5 5 2 BON domain S_layer_C PF05124.7 gi|407464748|ref|YP_006775630.1| - 0.044 13.4 0.5 0.066 12.8 0.0 1.5 2 0 0 2 2 2 0 S-layer like family, C-terminal region Ribosomal_S8 PF00410.14 gi|407464749|ref|YP_006775631.1| - 2.3e-22 79.1 0.0 2.9e-22 78.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.16 gi|407464750|ref|YP_006775632.1| - 1.9e-15 55.9 3.8 2.2e-15 55.7 2.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-FPG_IleRS PF06827.9 gi|407464750|ref|YP_006775632.1| - 0.0089 15.6 2.0 0.017 14.7 1.2 1.6 1 1 0 1 1 1 1 Zinc finger found in FPG and IleRS DZR PF12773.2 gi|407464750|ref|YP_006775632.1| - 0.098 12.4 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-dskA_traR PF01258.12 gi|407464750|ref|YP_006775632.1| - 1.9 8.2 4.5 25 4.7 3.2 2.1 1 1 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger Ribosomal_L5_C PF00673.16 gi|407464751|ref|YP_006775633.1| - 4.2e-23 80.8 0.0 7.4e-23 80.1 0.0 1.4 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.14 gi|407464751|ref|YP_006775633.1| - 2.2e-11 43.3 0.0 4.3e-11 42.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S4e PF00900.15 gi|407464752|ref|YP_006775634.1| - 8.5e-23 79.8 0.6 1.5e-22 78.9 0.4 1.4 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.7 gi|407464752|ref|YP_006775634.1| - 3.5e-13 49.1 2.6 5.5e-13 48.5 1.8 1.3 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.20 gi|407464752|ref|YP_006775634.1| - 5.9e-05 22.4 0.1 0.00016 21.0 0.0 1.7 1 0 0 1 1 1 1 S4 domain KOW PF00467.24 gi|407464752|ref|YP_006775634.1| - 0.035 13.8 0.4 0.15 11.8 0.0 2.3 2 0 0 2 2 2 0 KOW motif KOW PF00467.24 gi|407464753|ref|YP_006775635.1| - 3.2e-05 23.4 0.9 3.2e-05 23.4 0.6 1.8 2 1 0 2 2 2 1 KOW motif Methyltrans_RNA PF04452.9 gi|407464753|ref|YP_006775635.1| - 0.086 11.9 0.2 0.18 10.8 0.1 1.5 1 1 1 2 2 2 0 RNA methyltransferase Ribosomal_L14 PF00238.14 gi|407464754|ref|YP_006775636.1| - 1e-32 112.4 0.3 1.1e-32 112.2 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_S17 PF00366.15 gi|407464755|ref|YP_006775637.1| - 3.7e-17 62.1 0.3 4.6e-17 61.8 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 UPF0086 PF01868.11 gi|407464756|ref|YP_006775638.1| - 5.2e-27 93.3 0.4 5.7e-27 93.1 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_L29 PF00831.18 gi|407464757|ref|YP_006775639.1| - 1.7e-13 50.0 5.0 1.9e-13 49.8 3.5 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein DUF1090 PF06476.7 gi|407464757|ref|YP_006775639.1| - 0.12 12.0 1.0 0.14 11.8 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) IncA PF04156.9 gi|407464757|ref|YP_006775639.1| - 0.2 11.2 1.9 0.22 11.0 1.3 1.1 1 0 0 1 1 1 0 IncA protein Spc42p PF11544.3 gi|407464757|ref|YP_006775639.1| - 0.22 11.5 2.0 0.26 11.2 1.0 1.4 1 1 0 1 1 1 0 Spindle pole body component Spc42p Ribosomal_S3_C PF00189.15 gi|407464758|ref|YP_006775640.1| - 2.6e-15 56.3 3.3 9.9e-15 54.5 0.1 2.3 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.12 gi|407464758|ref|YP_006775640.1| - 1.1e-12 47.3 0.0 1.1e-12 47.3 0.0 2.4 2 1 0 2 2 2 1 KH domain KH_4 PF13083.1 gi|407464758|ref|YP_006775640.1| - 0.0095 15.5 0.3 0.033 13.8 0.0 2.0 2 0 0 2 2 2 1 KH domain KH_1 PF00013.24 gi|407464758|ref|YP_006775640.1| - 0.15 11.6 0.1 0.15 11.6 0.1 3.1 3 1 0 3 3 3 0 KH domain KH_3 PF13014.1 gi|407464758|ref|YP_006775640.1| - 0.45 10.2 3.8 0.54 9.9 0.3 2.7 3 0 0 3 3 3 0 KH domain Ribosomal_L22 PF00237.14 gi|407464759|ref|YP_006775641.1| - 4.9e-30 103.5 0.5 5.4e-30 103.4 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e BRX_N PF13713.1 gi|407464759|ref|YP_006775641.1| - 0.056 12.9 0.2 0.17 11.3 0.0 1.8 2 0 0 2 2 2 0 Transcription factor BRX N-terminal domain Ribosomal_S19 PF00203.16 gi|407464760|ref|YP_006775642.1| - 1.3e-23 82.4 0.2 1.8e-23 81.9 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Ribosomal_L23 PF00276.15 gi|407464761|ref|YP_006775643.1| - 6.5e-11 42.0 5.1 1.6e-10 40.8 3.5 1.6 1 1 0 1 1 1 1 Ribosomal protein L23 RRM_5 PF13893.1 gi|407464761|ref|YP_006775643.1| - 0.0063 16.3 1.2 0.037 13.8 0.1 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NOP5NT PF08156.8 gi|407464761|ref|YP_006775643.1| - 0.025 14.7 0.3 0.036 14.2 0.2 1.3 1 0 0 1 1 1 0 NOP5NT (NUC127) domain ToxN_toxin PF13958.1 gi|407464761|ref|YP_006775643.1| - 0.08 12.6 1.8 0.098 12.3 1.2 1.1 1 0 0 1 1 1 0 Toxin ToxN, type III toxin-antitoxin system RRM_6 PF14259.1 gi|407464761|ref|YP_006775643.1| - 0.081 12.9 0.2 0.24 11.4 0.1 1.9 2 1 0 2 2 2 0 RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) Ribosomal_L4 PF00573.17 gi|407464762|ref|YP_006775644.1| - 1.4e-44 151.8 0.1 1.6e-44 151.6 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.17 gi|407464763|ref|YP_006775645.1| - 1.5e-52 178.5 2.9 1.8e-52 178.3 2.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L3 Methyltrn_RNA_3 PF02598.12 gi|407464764|ref|YP_006775646.1| - 6.7e-54 183.2 0.0 7.8e-54 182.9 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methyltransferase SpoU_methylase PF00588.14 gi|407464764|ref|YP_006775646.1| - 0.00079 19.3 0.0 0.35 10.7 0.0 2.2 2 0 0 2 2 2 2 SpoU rRNA Methylase family PDZ_2 PF13180.1 gi|407464764|ref|YP_006775646.1| - 0.02 14.7 0.1 0.049 13.5 0.1 1.6 1 0 0 1 1 1 0 PDZ domain Proteasome PF00227.21 gi|407464765|ref|YP_006775647.1| - 2.6e-55 186.6 0.2 3.2e-55 186.3 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.4 gi|407464765|ref|YP_006775647.1| - 1.6e-14 52.8 0.6 5.1e-14 51.2 0.1 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature DUF371 PF04027.8 gi|407464766|ref|YP_006775648.1| - 7.9e-43 145.2 0.2 8.6e-43 145.1 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) GSDH PF07995.6 gi|407464767|ref|YP_006775649.1| - 2.4e-89 299.6 0.1 3e-89 299.3 0.1 1.1 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase NHL PF01436.16 gi|407464767|ref|YP_006775649.1| - 0.01 15.7 0.0 3.5 7.7 0.0 3.5 3 0 0 3 3 3 0 NHL repeat SGL PF08450.7 gi|407464767|ref|YP_006775649.1| - 0.015 14.7 0.0 23 4.2 0.0 3.2 3 1 0 3 3 3 0 SMP-30/Gluconolaconase/LRE-like region WbqC PF08889.6 gi|407464768|ref|YP_006775650.1| - 0.026 14.0 0.3 0.034 13.5 0.2 1.2 1 0 0 1 1 1 0 WbqC-like protein family Snf7 PF03357.16 gi|407464769|ref|YP_006775651.1| - 1.1e-06 28.1 0.1 1.8e-06 27.4 0.1 1.3 1 0 0 1 1 1 1 Snf7 AhpC-TSA PF00578.16 gi|407464770|ref|YP_006775652.1| - 1.2e-08 34.7 0.1 1.4e-07 31.2 0.0 2.1 2 0 0 2 2 2 1 AhpC/TSA family Redoxin PF08534.5 gi|407464770|ref|YP_006775652.1| - 1.5e-08 34.2 0.0 2.5e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.1 gi|407464770|ref|YP_006775652.1| - 0.002 18.1 0.1 0.0051 16.9 0.1 1.7 1 0 0 1 1 1 1 Thioredoxin-like DsbD PF02683.10 gi|407464771|ref|YP_006775653.1| - 1.4e-46 158.7 23.4 1.6e-46 158.5 16.2 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|407464771|ref|YP_006775653.1| - 3.7e-09 36.6 17.7 5.6e-09 36.0 12.2 1.3 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF2910 PF11139.3 gi|407464771|ref|YP_006775653.1| - 3.1e-05 23.2 9.8 0.0016 17.6 5.2 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF2910) DUF4112 PF13430.1 gi|407464771|ref|YP_006775653.1| - 0.91 9.4 5.0 0.16 11.8 0.2 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4112) Aminotran_1_2 PF00155.16 gi|407464772|ref|YP_006775654.1| - 3.3e-55 187.4 0.0 3.8e-55 187.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|407464772|ref|YP_006775654.1| - 9.6e-05 21.6 0.0 0.00033 19.8 0.0 1.8 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|407464772|ref|YP_006775654.1| - 0.00025 19.4 0.1 0.00042 18.7 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme IF2_N PF04760.10 gi|407464772|ref|YP_006775654.1| - 0.007 16.0 2.2 0.012 15.2 0.4 2.4 3 0 0 3 3 3 1 Translation initiation factor IF-2, N-terminal region DUF148 PF02520.12 gi|407464772|ref|YP_006775654.1| - 0.04 13.7 0.1 0.16 11.8 0.0 2.0 1 0 0 1 1 1 0 Domain of unknown function DUF148 Aminotran_5 PF00266.14 gi|407464772|ref|YP_006775654.1| - 0.06 12.0 0.0 0.11 11.2 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-V CTK3_C PF12350.3 gi|407464772|ref|YP_006775654.1| - 0.094 12.7 1.0 0.25 11.4 0.7 1.7 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 C-terminus BATS PF06968.8 gi|407464773|ref|YP_006775655.1| - 7.2e-23 80.2 0.0 1.4e-21 76.1 0.0 2.4 2 0 0 2 2 2 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.16 gi|407464773|ref|YP_006775655.1| - 7.2e-19 68.5 1.2 2.8e-18 66.6 0.4 2.0 2 0 0 2 2 2 1 Radical SAM superfamily DUF1471 PF07338.8 gi|407464773|ref|YP_006775655.1| - 0.062 12.9 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1471) UDP-g_GGTase PF06427.6 gi|407464773|ref|YP_006775655.1| - 0.084 12.1 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose:Glycoprotein Glucosyltransferase Aminotran_3 PF00202.16 gi|407464774|ref|YP_006775656.1| - 1.7e-90 303.3 0.9 2e-90 303.1 0.6 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.16 gi|407464774|ref|YP_006775656.1| - 0.00079 18.6 0.0 0.0014 17.8 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase PAGK PF15284.1 gi|407464774|ref|YP_006775656.1| - 0.032 13.9 0.2 0.18 11.5 0.2 2.1 2 0 0 2 2 2 0 Phage-encoded virulence factor SRP54_N PF02881.14 gi|407464774|ref|YP_006775656.1| - 0.63 10.1 4.4 0.57 10.3 1.2 2.4 3 0 0 3 3 3 0 SRP54-type protein, helical bundle domain AAA_26 PF13500.1 gi|407464775|ref|YP_006775657.1| - 2e-37 128.7 0.0 2.3e-37 128.5 0.0 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.18 gi|407464775|ref|YP_006775657.1| - 6.6e-12 45.2 0.2 8.5e-12 44.8 0.1 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.4 gi|407464775|ref|YP_006775657.1| - 0.0037 17.1 0.3 0.0066 16.3 0.2 1.6 1 0 0 1 1 1 1 ParA/MinD ATPase like DUF1611 PF07755.6 gi|407464775|ref|YP_006775657.1| - 0.0099 14.5 0.1 0.45 9.1 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1611) ASL_C PF08328.6 gi|407464776|ref|YP_006775658.1| - 0.048 13.4 0.3 0.15 11.8 0.1 1.9 1 1 1 2 2 2 0 Adenylosuccinate lyase C-terminal HMG_CoA_synt_C PF08540.5 gi|407464777|ref|YP_006775659.1| - 7.6e-32 110.9 0.1 1.3e-31 110.1 0.1 1.3 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.12 gi|407464777|ref|YP_006775659.1| - 5.5e-31 107.4 0.2 9.4e-31 106.6 0.1 1.3 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal Thioredoxin_4 PF13462.1 gi|407464778|ref|YP_006775660.1| - 4e-30 104.9 0.0 5.1e-30 104.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.15 gi|407464778|ref|YP_006775660.1| - 5.4e-16 58.7 0.0 9e-15 54.7 0.0 2.0 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.1 gi|407464778|ref|YP_006775660.1| - 8.4e-08 32.3 0.0 4.1e-07 30.1 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.1 gi|407464778|ref|YP_006775660.1| - 0.094 12.8 0.0 14 5.8 0.0 2.3 2 0 0 2 2 2 0 Thioredoxin-like Mcp5_PH PF12814.2 gi|407464780|ref|YP_006775662.1| - 0.37 10.7 5.4 0.66 9.9 3.7 1.6 1 1 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology RR_TM4-6 PF06459.7 gi|407464780|ref|YP_006775662.1| - 1.7 8.4 6.9 1.9 8.3 4.8 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 zf-C3HC4_3 PF13920.1 gi|407464781|ref|YP_006775663.1| - 0.021 14.4 1.5 3.9 7.2 0.1 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Peptidase_C71 PF12386.3 gi|407464781|ref|YP_006775663.1| - 0.026 13.9 0.3 0.028 13.8 0.2 1.2 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei DUF2180 PF09947.4 gi|407464781|ref|YP_006775663.1| - 0.053 13.2 3.8 2.4 7.9 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2180) gag_pre-integrs PF13976.1 gi|407464781|ref|YP_006775663.1| - 0.077 12.6 1.5 0.89 9.2 0.1 2.1 2 0 0 2 2 2 0 GAG-pre-integrase domain DUF4428 PF14471.1 gi|407464781|ref|YP_006775663.1| - 0.091 12.5 3.8 0.75 9.5 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) HNH_5 PF14279.1 gi|407464781|ref|YP_006775663.1| - 0.15 12.0 2.7 1.1 9.3 1.8 2.2 1 1 0 1 1 1 0 HNH endonuclease Tnp_zf-ribbon_2 PF13842.1 gi|407464781|ref|YP_006775663.1| - 0.16 12.3 4.3 1.3 9.5 0.2 2.3 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon Gin PF10764.4 gi|407464781|ref|YP_006775663.1| - 0.68 9.6 3.4 14 5.4 0.2 2.2 2 0 0 2 2 2 0 Inhibitor of sigma-G Gin DUF2039 PF10217.4 gi|407464781|ref|YP_006775663.1| - 0.74 9.8 5.8 0.17 11.9 1.8 1.6 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2039) ProRS-C_1 PF09180.6 gi|407464781|ref|YP_006775663.1| - 1.6 8.7 3.8 1.6 8.7 0.1 2.1 1 1 1 2 2 2 0 Prolyl-tRNA synthetase, C-terminal zf-CHY PF05495.7 gi|407464781|ref|YP_006775663.1| - 1.9 8.6 6.2 11 6.2 4.3 2.0 1 1 0 1 1 1 0 CHY zinc finger DUF21 PF01595.15 gi|407464782|ref|YP_006775664.1| - 4.9e-53 179.1 0.2 6.7e-53 178.6 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF21 CorC_HlyC PF03471.12 gi|407464782|ref|YP_006775664.1| - 9e-18 63.8 3.9 9.1e-18 63.8 0.7 2.2 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.23 gi|407464782|ref|YP_006775664.1| - 1.4e-17 63.1 0.9 1.4e-07 31.1 0.1 2.6 2 0 0 2 2 2 2 CBS domain PALP PF00291.20 gi|407464783|ref|YP_006775665.1| - 6.5e-43 147.1 0.0 8.6e-43 146.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PK_C PF02887.11 gi|407464783|ref|YP_006775665.1| - 0.27 10.7 2.3 0.43 10.1 0.4 2.1 2 0 0 2 2 2 0 Pyruvate kinase, alpha/beta domain GIT1_C PF12205.3 gi|407464785|ref|YP_006775667.1| - 0.00059 19.6 0.0 0.00069 19.4 0.0 1.1 1 0 0 1 1 1 1 G protein-coupled receptor kinase-interacting protein 1 C term IFT20 PF14931.1 gi|407464785|ref|YP_006775667.1| - 0.01 15.6 0.6 2.4 8.0 0.0 2.1 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 Sec5 PF15469.1 gi|407464785|ref|YP_006775667.1| - 0.012 15.3 0.6 0.26 10.9 0.0 2.0 1 1 1 2 2 2 0 Exocyst complex component Sec5 Trypan_glycop PF00913.14 gi|407464785|ref|YP_006775667.1| - 0.08 11.8 0.6 0.083 11.7 0.4 1.0 1 0 0 1 1 1 0 Trypanosome variant surface glycoprotein (A-type) Hjc PF01870.13 gi|407464787|ref|YP_006775669.1| - 2.5e-05 23.7 0.0 4.3e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) DUF35_N PF12172.3 gi|407464789|ref|YP_006775671.1| - 0.0018 18.1 1.2 0.0034 17.2 0.8 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF3913 PF13052.1 gi|407464789|ref|YP_006775671.1| - 0.035 14.0 0.1 0.061 13.2 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3913) RsgI_N PF12791.2 gi|407464789|ref|YP_006775671.1| - 0.15 11.7 0.9 8.3 6.1 0.1 2.2 2 0 0 2 2 2 0 Anti-sigma factor N-terminus Thiolase_C PF02803.13 gi|407464790|ref|YP_006775672.1| - 1.3e-10 40.7 0.1 3.2e-10 39.4 0.1 1.6 1 0 0 1 1 1 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 gi|407464790|ref|YP_006775672.1| - 1.7e-05 23.9 0.0 3.9e-05 22.7 0.0 1.7 2 0 0 2 2 2 1 Thiolase, N-terminal domain ACP_syn_III PF08545.5 gi|407464790|ref|YP_006775672.1| - 0.0038 16.8 0.0 0.011 15.4 0.0 1.7 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ketoacyl-synt PF00109.21 gi|407464790|ref|YP_006775672.1| - 0.0085 15.5 0.0 0.024 14.1 0.0 1.8 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Bac_luciferase PF00296.15 gi|407464791|ref|YP_006775673.1| - 1.9e-54 184.9 0.0 2.2e-54 184.6 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase KH_5 PF13184.1 gi|407464792|ref|YP_006775674.1| - 0.021 14.6 0.8 0.028 14.2 0.6 1.3 1 0 0 1 1 1 0 NusA-like KH domain Pyr_excise PF03013.9 gi|407464792|ref|YP_006775674.1| - 0.026 14.2 1.7 0.028 14.1 1.2 1.0 1 0 0 1 1 1 0 Pyrimidine dimer DNA glycosylase Spb1_C PF07780.7 gi|407464792|ref|YP_006775674.1| - 0.053 12.9 7.2 0.062 12.7 5.0 1.1 1 0 0 1 1 1 0 Spb1 C-terminal domain Syntaxin PF00804.20 gi|407464792|ref|YP_006775674.1| - 0.062 13.4 5.1 0.09 12.9 3.6 1.3 1 1 0 1 1 1 0 Syntaxin DUF1664 PF07889.7 gi|407464792|ref|YP_006775674.1| - 0.074 12.8 4.2 0.086 12.6 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4559 PF15112.1 gi|407464792|ref|YP_006775674.1| - 0.15 11.1 4.0 0.2 10.8 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Fmp27_WPPW PF10359.4 gi|407464792|ref|YP_006775674.1| - 0.16 10.3 5.7 0.17 10.3 3.9 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Vac_Fusion PF02346.11 gi|407464792|ref|YP_006775674.1| - 0.21 11.0 2.9 2.9 7.3 0.1 2.2 2 0 0 2 2 2 0 Chordopoxvirus fusion protein TBPIP PF07106.8 gi|407464792|ref|YP_006775674.1| - 0.22 11.0 9.9 0.28 10.7 6.9 1.2 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) RPW8 PF05659.6 gi|407464792|ref|YP_006775674.1| - 0.41 10.1 5.6 0.45 10.0 3.9 1.1 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 BLOC1_2 PF10046.4 gi|407464792|ref|YP_006775674.1| - 0.41 10.8 8.6 0.62 10.2 5.9 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Snf7 PF03357.16 gi|407464792|ref|YP_006775674.1| - 0.7 9.2 8.5 20 4.4 5.6 2.0 1 1 0 1 1 1 0 Snf7 DUF16 PF01519.11 gi|407464792|ref|YP_006775674.1| - 0.75 10.0 6.5 0.96 9.6 4.5 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF16 DUF342 PF03961.8 gi|407464792|ref|YP_006775674.1| - 1.4 7.2 9.9 1.5 7.1 6.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF342) XhlA PF10779.4 gi|407464792|ref|YP_006775674.1| - 1.7 8.5 10.7 3.9 7.4 7.4 1.6 1 1 0 1 1 1 0 Haemolysin XhlA IncA PF04156.9 gi|407464792|ref|YP_006775674.1| - 4 7.0 6.4 5.4 6.5 4.4 1.2 1 0 0 1 1 1 0 IncA protein AAA_23 PF13476.1 gi|407464792|ref|YP_006775674.1| - 7.8 6.7 13.6 8.5 6.6 9.4 1.1 1 0 0 1 1 1 0 AAA domain NTP_transferase PF00483.18 gi|407464794|ref|YP_006775676.1| - 6.8e-30 104.1 0.2 1.2e-29 103.3 0.2 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|407464794|ref|YP_006775676.1| - 4.5e-12 46.3 0.0 5.9e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|407464794|ref|YP_006775676.1| - 0.0062 16.0 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MSP7_C PF12948.2 gi|407464795|ref|YP_006775677.1| - 0.043 14.0 0.1 4.3 7.6 0.0 2.0 2 0 0 2 2 2 0 MSP7-like protein C-terminal domain DUF3502 PF12010.3 gi|407464795|ref|YP_006775677.1| - 0.078 12.9 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) DUF4418 PF14387.1 gi|407464796|ref|YP_006775678.1| - 0.0017 18.0 1.1 0.0017 18.0 0.8 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4418) MreD PF04093.7 gi|407464796|ref|YP_006775678.1| - 0.1 12.4 2.0 0.1 12.4 0.2 1.7 1 1 0 2 2 2 0 rod shape-determining protein MreD ABC2_membrane_5 PF13346.1 gi|407464796|ref|YP_006775678.1| - 0.13 11.5 8.7 0.17 11.1 6.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF1516 PF07457.6 gi|407464796|ref|YP_006775678.1| - 0.14 12.2 6.0 0.3 11.1 1.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1516) DUF3099 PF11298.3 gi|407464796|ref|YP_006775678.1| - 0.29 10.8 0.0 0.29 10.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3099) TctB PF07331.6 gi|407464796|ref|YP_006775678.1| - 0.33 10.5 8.0 0.25 10.9 0.8 2.2 1 1 1 2 2 2 0 Tripartite tricarboxylate transporter TctB family DUF4401 PF14351.1 gi|407464796|ref|YP_006775678.1| - 0.87 8.5 5.2 0.28 10.1 0.7 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4401) DUF373 PF04123.8 gi|407464796|ref|YP_006775678.1| - 1.1 8.1 6.4 0.25 10.3 2.1 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF373) DUF1118 PF06549.7 gi|407464796|ref|YP_006775678.1| - 1.2 9.2 5.3 0.46 10.6 0.2 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1118) SecE PF00584.15 gi|407464796|ref|YP_006775678.1| - 1.4 8.5 3.6 6.8 6.3 0.0 2.2 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex DUF3185 PF11381.3 gi|407464796|ref|YP_006775678.1| - 2.6 7.8 14.7 1.2 8.9 5.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) DUF2975 PF11188.3 gi|407464796|ref|YP_006775678.1| - 2.8 7.6 7.0 2.2 8.0 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2975) DUF4064 PF13273.1 gi|407464796|ref|YP_006775678.1| - 3.2 7.9 16.3 2.1 8.4 8.4 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) O-antigen_lig PF13425.1 gi|407464796|ref|YP_006775678.1| - 3.5 7.6 7.9 0.37 10.7 1.5 2.0 2 1 0 2 2 2 0 O-antigen ligase like membrane protein VIT1 PF01988.14 gi|407464796|ref|YP_006775678.1| - 9.6 5.6 10.5 0.26 10.7 2.8 1.6 2 0 0 2 2 2 0 VIT family ATP-grasp PF02222.17 gi|407464797|ref|YP_006775679.1| - 4.4e-57 192.1 0.1 7e-57 191.5 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|407464797|ref|YP_006775679.1| - 8.1e-17 61.5 0.0 1.5e-16 60.6 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|407464797|ref|YP_006775679.1| - 7.6e-07 29.1 0.4 1.9e-06 27.8 0.3 1.7 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|407464797|ref|YP_006775679.1| - 1.9e-06 27.3 0.2 7.1e-06 25.5 0.2 1.9 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.1 gi|407464797|ref|YP_006775679.1| - 2.4e-05 23.2 0.0 0.00049 18.9 0.0 2.6 4 0 0 4 4 4 1 ATP-grasp in the biosynthetic pathway with Ter operon DUF1297 PF06973.7 gi|407464797|ref|YP_006775679.1| - 0.0026 17.1 0.0 0.0044 16.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) RimK PF08443.6 gi|407464797|ref|YP_006775679.1| - 0.0046 16.4 1.2 0.035 13.5 0.2 2.4 2 1 0 2 2 2 1 RimK-like ATP-grasp domain GARS_A PF01071.14 gi|407464797|ref|YP_006775679.1| - 0.054 13.0 0.0 0.097 12.2 0.0 1.6 1 1 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TrkA_N PF02254.13 gi|407464797|ref|YP_006775679.1| - 0.086 12.8 1.2 1.4 8.9 0.0 3.2 4 1 0 4 4 4 0 TrkA-N domain AIRC PF00731.15 gi|407464798|ref|YP_006775680.1| - 2.2e-57 192.5 0.6 2.9e-57 192.1 0.4 1.2 1 0 0 1 1 1 1 AIR carboxylase PALP PF00291.20 gi|407464799|ref|YP_006775681.1| - 4.9e-79 265.7 3.0 6.7e-79 265.2 1.4 1.5 2 0 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme ACT_4 PF13291.1 gi|407464799|ref|YP_006775681.1| - 0.0005 20.3 0.1 0.0013 19.0 0.1 1.6 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|407464799|ref|YP_006775681.1| - 0.0026 17.2 0.1 0.0078 15.6 0.1 1.8 1 0 0 1 1 1 1 ACT domain Peripla_BP_4 PF13407.1 gi|407464799|ref|YP_006775681.1| - 0.0027 17.1 0.8 2.2 7.5 0.5 2.4 2 1 0 2 2 2 2 Periplasmic binding protein domain Thr_dehydrat_C PF00585.13 gi|407464799|ref|YP_006775681.1| - 0.021 14.4 0.0 0.12 12.0 0.0 2.1 2 0 0 2 2 2 0 C-terminal regulatory domain of Threonine dehydratase GFRP PF06399.8 gi|407464800|ref|YP_006775682.1| - 0.023 14.2 0.0 0.058 12.9 0.0 1.6 1 0 0 1 1 1 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) Guanylate_cyc PF00211.15 gi|407464801|ref|YP_006775683.1| - 5.4e-17 61.7 0.1 7.6e-17 61.2 0.1 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain DivIC PF04977.10 gi|407464802|ref|YP_006775684.1| - 0.011 15.2 0.2 0.016 14.6 0.1 1.3 1 0 0 1 1 1 0 Septum formation initiator HALZ PF02183.13 gi|407464802|ref|YP_006775684.1| - 0.025 14.3 4.3 0.04 13.6 3.0 1.4 1 0 0 1 1 1 0 Homeobox associated leucine zipper Prp19 PF08606.6 gi|407464802|ref|YP_006775684.1| - 0.11 12.2 0.3 0.11 12.2 0.2 1.6 2 0 0 2 2 2 0 Prp19/Pso4-like bZIP_1 PF00170.16 gi|407464802|ref|YP_006775684.1| - 0.72 9.8 6.7 1.2 9.2 4.1 1.6 2 0 0 2 2 2 0 bZIP transcription factor Herpes_BLRF2 PF05812.7 gi|407464802|ref|YP_006775684.1| - 1.1 9.0 6.3 1.6 8.5 4.4 1.2 1 0 0 1 1 1 0 Herpesvirus BLRF2 protein Glyoxalase_2 PF12681.2 gi|407464804|ref|YP_006775686.1| - 1.3e-15 57.8 0.0 1.7e-15 57.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|407464804|ref|YP_006775686.1| - 8.3e-09 35.4 0.0 1.6e-08 34.5 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.1 gi|407464804|ref|YP_006775686.1| - 0.0076 16.2 0.0 0.27 11.2 0.0 2.1 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AsnC_trans_reg PF01037.16 gi|407464805|ref|YP_006775687.1| - 2.3e-07 30.3 0.0 2.9e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 AsnC family ACT_4 PF13291.1 gi|407464805|ref|YP_006775687.1| - 0.018 15.4 1.1 0.13 12.6 0.3 2.0 1 1 1 2 2 2 0 ACT domain PTPS PF01242.14 gi|407464806|ref|YP_006775688.1| - 0.033 13.8 0.1 0.049 13.3 0.1 1.3 1 0 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase DUF503 PF04456.7 gi|407464806|ref|YP_006775688.1| - 0.048 13.2 0.5 0.059 12.9 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF503) KH_5 PF13184.1 gi|407464806|ref|YP_006775688.1| - 0.065 13.0 3.7 0.16 11.7 2.5 1.8 1 1 0 1 1 1 0 NusA-like KH domain RC-P840_PscD PF10657.4 gi|407464806|ref|YP_006775688.1| - 0.2 11.4 1.2 0.22 11.3 0.8 1.1 1 0 0 1 1 1 0 Photosystem P840 reaction centre protein PscD DUF1947 PF09183.5 gi|407464807|ref|YP_006775689.1| - 0.15 11.8 0.5 0.28 10.9 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1947) PEPCK_ATP PF01293.15 gi|407464807|ref|YP_006775689.1| - 0.62 8.5 3.6 0.67 8.4 2.5 1.0 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase CBFB_NFYA PF02045.10 gi|407464807|ref|YP_006775689.1| - 0.9 10.1 0.0 0.9 10.1 0.0 2.3 2 1 0 2 2 2 0 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B EspA PF03433.8 gi|407464807|ref|YP_006775689.1| - 0.9 8.9 5.2 0.99 8.8 3.6 1.1 1 0 0 1 1 1 0 EspA-like secreted protein eIF3_subunit PF08597.5 gi|407464807|ref|YP_006775689.1| - 2.2 7.7 16.0 2.4 7.6 11.1 1.1 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit FYDLN_acid PF09538.5 gi|407464807|ref|YP_006775689.1| - 3.1 8.3 8.8 3.7 8.1 6.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) DUF3464 PF11947.3 gi|407464807|ref|YP_006775689.1| - 4.1 6.8 7.3 4 6.8 5.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3464) NARP1 PF12569.3 gi|407464807|ref|YP_006775689.1| - 4.4 5.9 12.7 4.1 6.0 8.8 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Peptidase_S49_N PF08496.5 gi|407464807|ref|YP_006775689.1| - 4.6 7.0 9.5 5.5 6.7 6.6 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal FDF PF09532.5 gi|407464807|ref|YP_006775689.1| - 4.8 7.7 10.3 7 7.2 7.2 1.3 1 1 0 1 1 1 0 FDF domain Glycoprotein_G PF00802.14 gi|407464807|ref|YP_006775689.1| - 5.5 6.0 14.2 5.8 5.9 9.8 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Mucin PF01456.12 gi|407464807|ref|YP_006775689.1| - 5.5 6.7 11.1 6.6 6.5 7.7 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein Rtf2 PF04641.7 gi|407464807|ref|YP_006775689.1| - 6.7 5.8 12.8 7.6 5.6 8.9 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger GKAP PF03359.8 gi|407464807|ref|YP_006775689.1| - 6.9 6.1 11.1 6.7 6.2 7.7 1.2 1 0 0 1 1 1 0 Guanylate-kinase-associated protein (GKAP) protein Dicty_REP PF05086.7 gi|407464807|ref|YP_006775689.1| - 7.5 4.1 7.8 7.6 4.1 5.4 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein GAGA_bind PF06217.7 gi|407464807|ref|YP_006775689.1| - 8.1 6.3 8.9 8.5 6.2 6.2 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family XAP5 PF04921.9 gi|407464807|ref|YP_006775689.1| - 9.6 5.6 10.6 11 5.4 7.4 1.1 1 0 0 1 1 1 0 XAP5, circadian clock regulator CEP1-DNA_bind PF09287.5 gi|407464808|ref|YP_006775690.1| - 0.028 13.8 0.0 0.028 13.8 0.0 1.0 1 0 0 1 1 1 0 CEP-1, DNA binding DUF4545 PF15078.1 gi|407464808|ref|YP_006775690.1| - 0.041 12.8 0.1 0.049 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4545) Cob_adeno_trans PF01923.13 gi|407464809|ref|YP_006775691.1| - 7.6e-59 198.1 0.0 8.5e-59 197.9 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase DUF1931 PF09123.6 gi|407464809|ref|YP_006775691.1| - 0.097 12.6 0.1 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1931) HD_3 PF13023.1 gi|407464810|ref|YP_006775692.1| - 7.4e-38 129.8 0.6 8.8e-38 129.6 0.4 1.0 1 0 0 1 1 1 1 HD domain HD PF01966.17 gi|407464810|ref|YP_006775692.1| - 1e-05 25.5 0.2 3.1e-05 23.9 0.1 1.8 1 1 0 1 1 1 1 HD domain P22_AR_C PF10548.4 gi|407464810|ref|YP_006775692.1| - 0.055 13.3 0.1 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 P22AR C-terminal domain YIEGIA PF14045.1 gi|407464811|ref|YP_006775693.1| - 0.096 11.3 0.3 0.099 11.2 0.2 1.0 1 0 0 1 1 1 0 YIEGIA protein DUF4579 PF15158.1 gi|407464811|ref|YP_006775693.1| - 0.11 11.9 0.1 0.13 11.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) HD_assoc PF13286.1 gi|407464811|ref|YP_006775693.1| - 0.14 12.4 0.5 1.2 9.4 0.1 2.0 1 1 1 2 2 2 0 Phosphohydrolase-associated domain DUF217 PF02697.9 gi|407464811|ref|YP_006775693.1| - 0.19 12.0 3.3 0.24 11.7 1.8 1.5 1 1 0 1 1 1 0 Uncharacterized ACR, COG1753 SAS4 PF15460.1 gi|407464811|ref|YP_006775693.1| - 1 9.2 5.4 2.1 8.2 0.9 2.0 1 1 1 2 2 2 0 Something about silencing, SAS, complex subunit 4 Homeobox PF00046.24 gi|407464813|ref|YP_006775695.1| - 0.12 12.0 0.0 0.25 10.9 0.0 1.5 1 0 0 1 1 1 0 Homeobox domain Saccharop_dh_N PF04455.7 gi|407464814|ref|YP_006775696.1| - 1.3e-35 121.5 0.5 3e-35 120.4 0.3 1.6 1 0 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region KaiC PF06745.8 gi|407464815|ref|YP_006775697.1| - 2.8e-58 196.7 0.0 3.3e-58 196.4 0.0 1.0 1 0 0 1 1 1 1 KaiC GvpD PF07088.6 gi|407464815|ref|YP_006775697.1| - 3.7e-10 38.7 0.0 5e-10 38.3 0.0 1.1 1 0 0 1 1 1 1 GvpD gas vesicle protein AAA_25 PF13481.1 gi|407464815|ref|YP_006775697.1| - 9.1e-07 28.4 0.0 1.7e-06 27.6 0.0 1.7 1 1 0 1 1 1 1 AAA domain RecA PF00154.16 gi|407464815|ref|YP_006775697.1| - 7.4e-05 21.9 0.0 0.00014 21.0 0.0 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein DnaB_C PF03796.10 gi|407464815|ref|YP_006775697.1| - 0.00044 19.2 0.0 0.00081 18.3 0.0 1.4 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_14 PF13173.1 gi|407464815|ref|YP_006775697.1| - 0.0073 16.2 0.0 0.017 14.9 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|407464815|ref|YP_006775697.1| - 0.0074 16.0 0.2 0.016 14.9 0.1 1.5 1 0 0 1 1 1 1 Part of AAA domain AAA_18 PF13238.1 gi|407464815|ref|YP_006775697.1| - 0.014 15.6 1.3 0.047 13.9 0.9 2.0 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|407464815|ref|YP_006775697.1| - 0.015 15.4 0.0 0.03 14.4 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|407464815|ref|YP_006775697.1| - 0.02 14.8 0.0 0.032 14.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain PPV_E1_C PF00519.12 gi|407464815|ref|YP_006775697.1| - 0.046 12.3 0.1 7.1 5.1 0.0 2.1 2 0 0 2 2 2 0 Papillomavirus helicase AAA_24 PF13479.1 gi|407464815|ref|YP_006775697.1| - 0.052 13.1 0.3 0.22 11.0 0.1 1.9 2 0 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|407464815|ref|YP_006775697.1| - 0.056 13.0 0.0 0.099 12.2 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ABC_tran PF00005.22 gi|407464815|ref|YP_006775697.1| - 0.057 13.7 0.3 0.082 13.2 0.2 1.5 1 1 0 1 1 1 0 ABC transporter AAA_17 PF13207.1 gi|407464815|ref|YP_006775697.1| - 0.059 14.1 4.6 0.34 11.7 3.2 2.1 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.4 gi|407464815|ref|YP_006775697.1| - 0.06 12.3 0.0 0.082 11.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) T2SE PF00437.15 gi|407464815|ref|YP_006775697.1| - 0.067 12.0 0.5 0.13 11.1 0.1 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_29 PF13555.1 gi|407464815|ref|YP_006775697.1| - 0.23 10.9 0.7 0.48 10.0 0.5 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain TrmB PF01978.14 gi|407464816|ref|YP_006775698.1| - 4.8e-11 42.2 0.0 9.2e-11 41.2 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|407464816|ref|YP_006775698.1| - 0.0044 16.5 0.0 0.0089 15.6 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_9 PF08221.6 gi|407464816|ref|YP_006775698.1| - 0.031 14.1 0.0 0.065 13.1 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_20 PF12840.2 gi|407464816|ref|YP_006775698.1| - 0.038 13.8 0.0 0.07 12.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.2 gi|407464816|ref|YP_006775698.1| - 0.17 11.5 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF536 PF04394.9 gi|407464817|ref|YP_006775699.1| - 0.16 11.7 1.6 3.6 7.3 0.1 3.0 2 0 0 2 2 2 0 Protein of unknown function, DUF536 Vma12 PF11712.3 gi|407464817|ref|YP_006775699.1| - 1.6 8.4 7.5 5.9 6.5 5.2 1.9 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Med9 PF07544.8 gi|407464817|ref|YP_006775699.1| - 2.4 7.9 6.6 2.2 8.0 0.1 2.7 3 0 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 Mt_ATP-synt_B PF05405.9 gi|407464819|ref|YP_006775701.1| - 0.0028 17.1 0.0 0.0039 16.6 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF2613 PF11021.3 gi|407464819|ref|YP_006775701.1| - 0.086 12.5 0.4 0.16 11.7 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) Cytadhesin_P30 PF07271.6 gi|407464819|ref|YP_006775701.1| - 0.12 11.6 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 Cytadhesin P30/P32 DUF2913 PF11140.3 gi|407464821|ref|YP_006775703.1| - 0.02 14.1 0.0 0.024 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2913) AAA_5 PF07728.9 gi|407464823|ref|YP_006775705.1| - 2.5e-19 69.3 0.0 3.8e-19 68.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) CbbQ_C PF08406.5 gi|407464823|ref|YP_006775705.1| - 1.7e-08 34.3 0.0 2.6e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 CbbQ/NirQ/NorQ C-terminal AAA PF00004.24 gi|407464823|ref|YP_006775705.1| - 3e-06 27.4 0.0 5.4e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.21 gi|407464823|ref|YP_006775705.1| - 0.00013 21.4 0.0 0.00029 20.3 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_17 PF13207.1 gi|407464823|ref|YP_006775705.1| - 0.00094 19.9 0.1 0.0034 18.1 0.1 2.0 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.1 gi|407464823|ref|YP_006775705.1| - 0.013 15.0 0.0 1 8.9 0.0 2.5 3 0 0 3 3 3 0 AAA domain IstB_IS21 PF01695.12 gi|407464823|ref|YP_006775705.1| - 0.018 14.4 0.0 0.034 13.5 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_19 PF13245.1 gi|407464823|ref|YP_006775705.1| - 0.018 14.7 0.0 0.032 13.9 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain MCM PF00493.18 gi|407464823|ref|YP_006775705.1| - 0.047 12.4 0.0 0.095 11.4 0.0 1.5 1 1 0 1 1 1 0 MCM2/3/5 family AAA_22 PF13401.1 gi|407464823|ref|YP_006775705.1| - 0.1 12.7 0.3 0.73 9.9 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|407464823|ref|YP_006775705.1| - 0.16 11.9 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain VWA PF00092.23 gi|407464824|ref|YP_006775706.1| - 2e-10 40.6 0.3 2e-10 40.6 0.2 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.1 gi|407464824|ref|YP_006775706.1| - 6.6e-10 39.3 0.0 1.2e-09 38.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|407464824|ref|YP_006775706.1| - 0.00061 18.9 0.0 0.00099 18.3 0.0 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein Ldh_2 PF02615.9 gi|407464824|ref|YP_006775706.1| - 0.0099 14.6 0.1 0.019 13.6 0.1 1.4 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase T2SE PF00437.15 gi|407464826|ref|YP_006775708.1| - 5.4e-46 156.6 0.0 9.1e-46 155.9 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.22 gi|407464826|ref|YP_006775708.1| - 4.7e-05 23.7 0.2 0.00022 21.5 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_29 PF13555.1 gi|407464826|ref|YP_006775708.1| - 6.4e-05 22.3 0.1 0.00013 21.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|407464826|ref|YP_006775708.1| - 0.00031 21.1 7.8 0.0024 18.2 0.1 2.5 2 0 0 2 2 2 1 AAA domain Miro PF08477.8 gi|407464826|ref|YP_006775708.1| - 0.0023 18.3 0.0 0.0063 16.9 0.0 1.7 1 0 0 1 1 1 1 Miro-like protein FtsK_SpoIIIE PF01580.13 gi|407464826|ref|YP_006775708.1| - 0.0027 17.2 2.1 0.017 14.5 0.2 2.2 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_17 PF13207.1 gi|407464826|ref|YP_006775708.1| - 0.005 17.6 0.5 0.017 15.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.1 gi|407464826|ref|YP_006775708.1| - 0.0098 15.8 0.4 0.0098 15.8 0.2 3.0 3 0 0 3 3 3 1 AAA domain MMR_HSR1 PF01926.18 gi|407464826|ref|YP_006775708.1| - 0.012 15.5 0.1 0.028 14.3 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase G-alpha PF00503.15 gi|407464826|ref|YP_006775708.1| - 0.015 14.0 0.7 0.043 12.5 0.0 1.9 2 0 0 2 2 2 0 G-protein alpha subunit Dynamin_N PF00350.18 gi|407464826|ref|YP_006775708.1| - 0.016 15.0 0.2 0.064 13.0 0.1 2.0 2 0 0 2 2 2 0 Dynamin family cobW PF02492.14 gi|407464826|ref|YP_006775708.1| - 0.02 14.3 0.4 0.056 12.8 0.3 1.8 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.1 gi|407464826|ref|YP_006775708.1| - 0.022 15.0 0.6 0.12 12.6 0.0 2.3 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.4 gi|407464826|ref|YP_006775708.1| - 0.025 14.0 0.3 0.08 12.4 0.0 2.0 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation PCMT PF01135.14 gi|407464826|ref|YP_006775708.1| - 0.028 13.9 0.0 0.06 12.8 0.0 1.5 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Arch_ATPase PF01637.13 gi|407464826|ref|YP_006775708.1| - 0.034 13.8 0.1 0.19 11.4 0.0 2.0 2 0 0 2 2 2 0 Archaeal ATPase AAA_30 PF13604.1 gi|407464826|ref|YP_006775708.1| - 0.035 13.6 0.0 0.065 12.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.2 gi|407464826|ref|YP_006775708.1| - 0.043 12.8 0.1 0.088 11.8 0.0 1.5 1 1 0 1 1 1 0 P-loop containing dynein motor region D3 PAS_10 PF13596.1 gi|407464826|ref|YP_006775708.1| - 0.052 13.8 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 PAS domain AAA_22 PF13401.1 gi|407464826|ref|YP_006775708.1| - 0.059 13.5 0.0 0.18 11.9 0.0 1.8 2 0 0 2 2 1 0 AAA domain Pox_A32 PF04665.7 gi|407464826|ref|YP_006775708.1| - 0.064 12.5 0.0 0.12 11.6 0.0 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_10 PF12846.2 gi|407464826|ref|YP_006775708.1| - 0.066 12.6 0.1 0.17 11.2 0.1 1.7 2 0 0 2 2 2 0 AAA-like domain AAA_19 PF13245.1 gi|407464826|ref|YP_006775708.1| - 0.074 12.8 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain DUF258 PF03193.11 gi|407464826|ref|YP_006775708.1| - 0.08 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 MobB PF03205.9 gi|407464826|ref|YP_006775708.1| - 0.083 12.5 0.1 0.2 11.3 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B TrwB_AAD_bind PF10412.4 gi|407464826|ref|YP_006775708.1| - 0.092 11.3 0.1 0.18 10.3 0.1 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_16 PF13191.1 gi|407464826|ref|YP_006775708.1| - 0.15 12.0 0.0 0.33 10.8 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain Response_reg PF00072.19 gi|407464827|ref|YP_006775709.1| - 4.3e-22 78.2 1.0 4.8e-22 78.0 0.7 1.0 1 0 0 1 1 1 1 Response regulator receiver domain DUF364 PF04016.7 gi|407464827|ref|YP_006775709.1| - 0.00037 19.8 0.0 0.00051 19.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF364) CoA_binding_2 PF13380.1 gi|407464827|ref|YP_006775709.1| - 0.051 13.7 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 CoA binding domain SRP54 PF00448.17 gi|407464827|ref|YP_006775709.1| - 0.057 12.8 0.1 0.063 12.7 0.1 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain HATPase_c PF02518.21 gi|407464828|ref|YP_006775710.1| - 3.2e-30 104.0 0.2 5.4e-30 103.3 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|407464828|ref|YP_006775710.1| - 2.6e-15 56.1 0.3 1.1e-14 54.2 0.0 2.2 2 1 1 3 3 3 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.1 gi|407464828|ref|YP_006775710.1| - 2e-06 27.5 0.3 4.9e-06 26.2 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.20 gi|407464828|ref|YP_006775710.1| - 2.5e-05 24.3 0.0 6.5e-05 23.0 0.0 1.7 1 0 0 1 1 1 1 HAMP domain HATPase_c_5 PF14501.1 gi|407464828|ref|YP_006775710.1| - 0.0001 21.9 0.5 0.00033 20.3 0.0 2.1 2 0 0 2 2 2 1 GHKL domain Cor1 PF04803.7 gi|407464828|ref|YP_006775710.1| - 0.0092 15.7 2.8 0.028 14.1 2.0 1.8 1 0 0 1 1 1 1 Cor1/Xlr/Xmr conserved region DUF2096 PF09869.4 gi|407464828|ref|YP_006775710.1| - 0.041 13.7 5.6 0.12 12.2 0.3 2.3 1 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2096) BAR PF03114.13 gi|407464828|ref|YP_006775710.1| - 0.053 13.0 5.0 0.095 12.1 2.5 2.2 1 1 1 2 2 2 0 BAR domain HATPase_c_2 PF13581.1 gi|407464828|ref|YP_006775710.1| - 0.11 12.2 0.0 0.2 11.4 0.0 1.5 1 1 0 1 1 1 0 Histidine kinase-like ATPase domain SHOCT PF09851.4 gi|407464829|ref|YP_006775711.1| - 1.1e-05 24.7 0.1 1.9e-05 23.9 0.1 1.4 1 0 0 1 1 1 1 Short C-terminal domain DUF3859 PF12975.2 gi|407464829|ref|YP_006775711.1| - 0.049 13.2 0.0 0.13 11.9 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3859) DUF2214 PF09980.4 gi|407464829|ref|YP_006775711.1| - 0.1 12.3 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2214) Aminotran_1_2 PF00155.16 gi|407464830|ref|YP_006775712.1| - 1.8e-38 132.4 0.0 2.4e-38 132.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|407464830|ref|YP_006775712.1| - 0.00059 19.0 0.0 0.00095 18.3 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase AMP-binding_C PF13193.1 gi|407464831|ref|YP_006775713.1| - 4.8e-12 46.6 0.0 6.7e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|407464832|ref|YP_006775714.1| - 2.1e-83 280.0 0.0 2.6e-83 279.7 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme DUF1340 PF07067.6 gi|407464832|ref|YP_006775714.1| - 0.078 12.1 0.2 0.2 10.7 0.2 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1340) GatB_N PF02934.10 gi|407464834|ref|YP_006775716.1| - 7.5e-72 241.6 0.0 1.1e-71 241.0 0.0 1.3 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|407464834|ref|YP_006775716.1| - 6.6e-32 110.2 5.5 1.1e-31 109.5 3.8 1.4 1 0 0 1 1 1 1 GatB domain Amidase PF01425.16 gi|407464835|ref|YP_006775717.1| - 1.1e-131 439.8 0.0 1.2e-131 439.6 0.0 1.0 1 0 0 1 1 1 1 Amidase SLS PF14611.1 gi|407464836|ref|YP_006775718.1| - 0.099 12.0 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial inner-membrane-bound regulator UPF0118 PF01594.11 gi|407464838|ref|YP_006775720.1| - 0.0032 16.5 0.0 0.0041 16.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF20 MacB_PCD PF12704.2 gi|407464838|ref|YP_006775720.1| - 0.4 10.2 3.2 0.55 9.7 2.2 1.5 1 1 0 1 1 1 0 MacB-like periplasmic core domain tRNA-synt_2 PF00152.15 gi|407464839|ref|YP_006775721.1| - 2.2e-86 289.6 0.7 5.9e-86 288.2 0.5 1.6 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|407464839|ref|YP_006775721.1| - 2.7e-11 43.1 0.0 4.9e-11 42.3 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|407464839|ref|YP_006775721.1| - 0.013 14.6 0.2 0.058 12.5 0.0 2.0 3 0 0 3 3 3 0 tRNA synthetases class II core domain (F) UPF0154 PF03672.8 gi|407464840|ref|YP_006775722.1| - 0.077 12.6 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) DUF2273 PF10031.4 gi|407464840|ref|YP_006775722.1| - 0.097 12.2 0.7 0.14 11.7 0.5 1.3 1 0 0 1 1 1 0 Small integral membrane protein (DUF2273) COPIIcoated_ERV PF07970.7 gi|407464841|ref|YP_006775723.1| - 0.11 12.1 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Endoplasmic reticulum vesicle transporter DUF1297 PF06973.7 gi|407464842|ref|YP_006775724.1| - 1.5e-74 249.3 0.1 2e-74 248.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|407464842|ref|YP_006775724.1| - 8.9e-47 157.9 0.0 1.5e-46 157.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_3 PF02655.9 gi|407464842|ref|YP_006775724.1| - 0.014 15.2 0.1 0.035 13.9 0.0 1.7 1 0 0 1 1 1 0 ATP-grasp domain RNA_pol_Rpb2_1 PF04563.10 gi|407464842|ref|YP_006775724.1| - 0.086 11.7 0.1 0.15 10.9 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase beta subunit BPD_transp_1 PF00528.17 gi|407464843|ref|YP_006775725.1| - 1.4e-18 67.1 14.4 1.4e-18 67.1 10.0 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component PrgI PF12666.2 gi|407464843|ref|YP_006775725.1| - 0.034 14.3 1.3 0.034 14.3 0.9 3.9 2 1 2 4 4 4 0 PrgI family protein DUF3154 PF11351.3 gi|407464843|ref|YP_006775725.1| - 0.68 9.6 5.8 4.1 7.1 2.5 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3154) ABC_tran PF00005.22 gi|407464844|ref|YP_006775726.1| - 3.8e-34 117.9 0.2 5.5e-34 117.4 0.2 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|407464844|ref|YP_006775726.1| - 2.9e-10 40.6 1.1 6.2e-05 23.1 0.0 2.3 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|407464844|ref|YP_006775726.1| - 1.1e-07 31.3 2.4 3.4e-05 23.1 1.7 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|407464844|ref|YP_006775726.1| - 4.9e-06 25.9 0.1 1.4e-05 24.5 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|407464844|ref|YP_006775726.1| - 0.0011 18.4 1.7 0.0014 18.1 0.3 1.7 2 0 0 2 2 2 1 AAA-like domain AAA_22 PF13401.1 gi|407464844|ref|YP_006775726.1| - 0.0012 19.0 0.9 0.17 11.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.7 gi|407464844|ref|YP_006775726.1| - 0.0021 17.1 0.3 0.0047 16.0 0.1 1.6 2 0 0 2 2 2 1 Zeta toxin DUF258 PF03193.11 gi|407464844|ref|YP_006775726.1| - 0.0024 17.1 0.0 0.0043 16.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_23 PF13476.1 gi|407464844|ref|YP_006775726.1| - 0.0031 17.8 0.5 0.007 16.7 0.4 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|407464844|ref|YP_006775726.1| - 0.0048 16.8 0.7 0.013 15.4 0.5 1.8 1 1 0 1 1 1 1 AAA ATPase domain KaiC PF06745.8 gi|407464844|ref|YP_006775726.1| - 0.0051 15.9 0.6 0.88 8.6 0.0 2.3 2 0 0 2 2 2 1 KaiC AAA_17 PF13207.1 gi|407464844|ref|YP_006775726.1| - 0.0068 17.2 0.1 0.02 15.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|407464844|ref|YP_006775726.1| - 0.015 14.7 0.3 0.071 12.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.12 gi|407464844|ref|YP_006775726.1| - 0.022 14.5 0.7 0.081 12.7 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function DUF87 Miro PF08477.8 gi|407464844|ref|YP_006775726.1| - 0.036 14.5 0.1 0.11 13.0 0.1 1.8 1 0 0 1 1 1 0 Miro-like protein AAA_18 PF13238.1 gi|407464844|ref|YP_006775726.1| - 0.047 13.9 0.0 0.11 12.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|407464844|ref|YP_006775726.1| - 0.049 13.1 0.0 0.099 12.1 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family MMR_HSR1 PF01926.18 gi|407464844|ref|YP_006775726.1| - 0.067 13.1 0.7 0.12 12.3 0.5 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase Mg_chelatase PF01078.16 gi|407464844|ref|YP_006775726.1| - 0.069 12.2 0.1 1 8.5 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.1 gi|407464844|ref|YP_006775726.1| - 0.076 12.5 0.2 0.14 11.7 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.9 gi|407464844|ref|YP_006775726.1| - 0.08 12.6 0.3 0.82 9.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Dynamin_N PF00350.18 gi|407464844|ref|YP_006775726.1| - 0.081 12.7 0.5 1.2 8.9 0.0 2.3 2 0 0 2 2 2 0 Dynamin family MobB PF03205.9 gi|407464844|ref|YP_006775726.1| - 0.097 12.3 0.1 0.32 10.7 0.0 1.8 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.17 gi|407464844|ref|YP_006775726.1| - 0.1 11.4 0.6 3.1 6.5 0.1 2.4 2 0 0 2 2 2 0 NB-ARC domain NACHT PF05729.7 gi|407464844|ref|YP_006775726.1| - 0.15 11.7 0.4 0.32 10.6 0.1 1.6 2 0 0 2 2 1 0 NACHT domain Pox_A32 PF04665.7 gi|407464844|ref|YP_006775726.1| - 0.15 11.3 1.1 0.3 10.3 0.0 2.0 3 0 0 3 3 3 0 Poxvirus A32 protein G-alpha PF00503.15 gi|407464844|ref|YP_006775726.1| - 0.18 10.4 2.7 0.058 12.0 0.1 1.6 2 1 0 2 2 2 0 G-protein alpha subunit Phosphonate-bd PF12974.2 gi|407464845|ref|YP_006775727.1| - 9.8e-45 152.8 0.3 1.3e-44 152.4 0.2 1.1 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Transferrin PF00405.12 gi|407464845|ref|YP_006775727.1| - 8.2e-07 28.2 0.0 1.7e-06 27.1 0.0 1.5 1 1 0 1 1 1 1 Transferrin SBP_bac_3 PF00497.15 gi|407464845|ref|YP_006775727.1| - 3.4e-06 26.4 0.0 8.6e-06 25.1 0.0 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1_2 PF13379.1 gi|407464845|ref|YP_006775727.1| - 6.5e-06 25.7 0.3 4.2e-05 23.0 0.0 2.1 2 1 1 3 3 3 1 NMT1-like family NMT1 PF09084.6 gi|407464845|ref|YP_006775727.1| - 0.00052 19.6 0.0 0.0085 15.7 0.0 2.2 2 0 0 2 2 2 1 NMT1/THI5 like YhfZ_C PF14503.1 gi|407464845|ref|YP_006775727.1| - 0.0016 17.7 0.0 0.9 8.8 0.0 2.2 2 0 0 2 2 2 2 YhfZ C-terminal domain TrmB PF01978.14 gi|407464846|ref|YP_006775728.1| - 0.00011 21.8 0.1 0.00019 21.0 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF1492 PF07374.6 gi|407464846|ref|YP_006775728.1| - 0.00016 21.6 0.2 0.00023 21.2 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1492) HTH_7 PF02796.10 gi|407464846|ref|YP_006775728.1| - 0.0002 21.1 0.1 0.00038 20.2 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_11 PF08279.7 gi|407464846|ref|YP_006775728.1| - 0.00026 20.5 0.1 0.00052 19.5 0.1 1.5 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.2 gi|407464846|ref|YP_006775728.1| - 0.00033 20.3 0.0 0.00044 19.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|407464846|ref|YP_006775728.1| - 0.0013 18.3 0.1 0.0028 17.2 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF4423 PF14394.1 gi|407464846|ref|YP_006775728.1| - 0.0017 17.8 0.1 0.0021 17.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_IclR PF09339.5 gi|407464846|ref|YP_006775728.1| - 0.0028 17.1 0.0 0.0039 16.7 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_23 PF13384.1 gi|407464846|ref|YP_006775728.1| - 0.0043 16.6 0.0 0.0091 15.6 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain FUR PF01475.14 gi|407464846|ref|YP_006775728.1| - 0.0043 16.9 0.1 0.0061 16.4 0.1 1.5 1 1 0 1 1 1 1 Ferric uptake regulator family Mga PF05043.8 gi|407464846|ref|YP_006775728.1| - 0.007 16.6 0.5 0.011 16.0 0.3 1.6 1 1 0 1 1 1 1 Mga helix-turn-helix domain Fe_dep_repress PF01325.14 gi|407464846|ref|YP_006775728.1| - 0.022 14.7 0.1 0.038 13.9 0.1 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.1 gi|407464846|ref|YP_006775728.1| - 0.029 13.7 0.0 0.073 12.4 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF674 PF05056.7 gi|407464846|ref|YP_006775728.1| - 0.035 12.7 0.2 0.041 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) Sigma70_r4_2 PF08281.7 gi|407464846|ref|YP_006775728.1| - 0.046 13.1 0.1 0.075 12.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 GerE PF00196.14 gi|407464846|ref|YP_006775728.1| - 0.076 12.3 0.1 0.17 11.2 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_22 PF13309.1 gi|407464846|ref|YP_006775728.1| - 0.088 12.5 0.1 0.17 11.6 0.1 1.6 1 1 0 1 1 1 0 HTH domain HTH_20 PF12840.2 gi|407464847|ref|YP_006775729.1| - 8.9e-08 31.8 0.0 1.4e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|407464847|ref|YP_006775729.1| - 2.3e-05 23.9 0.4 5.4e-05 22.8 0.2 1.7 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|407464847|ref|YP_006775729.1| - 4.6e-05 22.8 0.5 5.7e-05 22.5 0.3 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit DUF742 PF05331.6 gi|407464847|ref|YP_006775729.1| - 0.0026 17.3 0.0 0.0032 17.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF742) MarR_2 PF12802.2 gi|407464847|ref|YP_006775729.1| - 0.0092 15.6 0.0 0.015 14.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|407464847|ref|YP_006775729.1| - 0.011 15.3 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_11 PF08279.7 gi|407464847|ref|YP_006775729.1| - 0.011 15.3 0.3 0.022 14.4 0.2 1.5 1 0 0 1 1 1 0 HTH domain ArsR PF09824.4 gi|407464847|ref|YP_006775729.1| - 0.02 14.2 0.1 0.025 13.8 0.1 1.2 1 0 0 1 1 1 0 ArsR transcriptional regulator PadR PF03551.9 gi|407464847|ref|YP_006775729.1| - 0.025 14.3 0.2 0.058 13.1 0.0 1.6 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_24 PF13412.1 gi|407464847|ref|YP_006775729.1| - 0.033 13.5 1.0 0.059 12.7 0.1 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Mga PF05043.8 gi|407464847|ref|YP_006775729.1| - 0.041 14.1 0.3 0.2 11.9 0.1 2.0 2 0 0 2 2 2 0 Mga helix-turn-helix domain DUF2250 PF10007.4 gi|407464847|ref|YP_006775729.1| - 0.049 13.5 0.2 0.069 13.0 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF1492 PF07374.6 gi|407464847|ref|YP_006775729.1| - 0.054 13.5 0.1 0.076 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) YycC PF14174.1 gi|407464847|ref|YP_006775729.1| - 0.13 11.9 0.0 0.32 10.6 0.0 1.8 1 0 0 1 1 1 0 YycC-like protein CbtA PF09490.5 gi|407464848|ref|YP_006775730.1| - 8.6e-19 67.7 0.3 1.1e-18 67.3 0.2 1.1 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtA) DUF1624 PF07786.7 gi|407464848|ref|YP_006775730.1| - 0.0019 17.5 1.2 0.0019 17.5 0.8 2.0 2 1 0 2 2 2 1 Protein of unknown function (DUF1624) MFS_2 PF13347.1 gi|407464848|ref|YP_006775730.1| - 0.057 11.7 5.0 0.11 10.8 0.5 2.4 1 1 1 2 2 2 0 MFS/sugar transport protein DUF3169 PF11368.3 gi|407464848|ref|YP_006775730.1| - 0.2 10.8 4.0 0.98 8.5 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) Acyl_transf_3 PF01757.17 gi|407464848|ref|YP_006775730.1| - 0.52 9.0 8.9 0.28 9.9 4.5 1.7 1 1 1 2 2 2 0 Acyltransferase family 5TM-5TMR_LYT PF07694.7 gi|407464848|ref|YP_006775730.1| - 1.1 8.5 14.6 2.9 7.1 3.7 3.8 2 1 2 4 4 4 0 5TMR of 5TMR-LYT MFS_1 PF07690.11 gi|407464848|ref|YP_006775730.1| - 5.5 5.6 19.2 0.045 12.4 4.9 2.5 2 1 0 2 2 2 0 Major Facilitator Superfamily CbtB PF09489.5 gi|407464849|ref|YP_006775731.1| - 5.1e-07 29.4 10.9 5.8e-05 22.9 7.5 2.1 1 1 0 1 1 1 1 Probable cobalt transporter subunit (CbtB) DUF4443 PF14544.1 gi|407464850|ref|YP_006775732.1| - 1.2e-08 34.7 0.0 1.9e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4443) HTH_36 PF13730.1 gi|407464850|ref|YP_006775732.1| - 0.0056 16.7 0.0 0.017 15.2 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain CbtB PF09489.5 gi|407464851|ref|YP_006775733.1| - 5.1e-07 29.4 10.9 5.8e-05 22.9 7.5 2.1 1 1 0 1 1 1 1 Probable cobalt transporter subunit (CbtB) Response_reg PF00072.19 gi|407464852|ref|YP_006775734.1| - 5.9e-14 52.0 0.2 9.1e-14 51.4 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Thioredoxin_4 PF13462.1 gi|407464853|ref|YP_006775735.1| - 1.4e-31 109.7 0.0 1.6e-31 109.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.15 gi|407464853|ref|YP_006775735.1| - 4.8e-11 42.5 0.0 5.1e-10 39.2 0.0 1.9 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.1 gi|407464853|ref|YP_006775735.1| - 1.3e-07 31.7 0.1 8.2e-07 29.2 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_5 PF13743.1 gi|407464853|ref|YP_006775735.1| - 0.012 15.1 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin Ldr_toxin PF13940.1 gi|407464853|ref|YP_006775735.1| - 0.067 12.9 0.2 0.14 11.9 0.1 1.5 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system eRF1_2 PF03464.10 gi|407464854|ref|YP_006775736.1| - 2.6e-29 102.2 0.0 1.3e-28 99.9 0.0 2.1 2 0 0 2 2 2 1 eRF1 domain 2 eRF1_3 PF03465.10 gi|407464854|ref|YP_006775736.1| - 1.5e-20 73.5 0.4 1.1e-19 70.7 0.1 2.3 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_1 PF03463.10 gi|407464854|ref|YP_006775736.1| - 3.5e-18 65.4 0.5 3.8e-17 62.1 0.0 2.1 2 0 0 2 2 2 1 eRF1 domain 1 DUF3795 PF12675.2 gi|407464854|ref|YP_006775736.1| - 0.085 13.0 0.8 0.16 12.1 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3795) HIT PF01230.18 gi|407464855|ref|YP_006775737.1| - 5.5e-24 84.5 0.1 6.7e-24 84.2 0.1 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.3 gi|407464855|ref|YP_006775737.1| - 1.4e-13 51.0 0.0 1.6e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding GalP_UDP_tr_C PF02744.12 gi|407464855|ref|YP_006775737.1| - 0.021 14.3 0.0 0.026 14.0 0.0 1.1 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain DUF515 PF04415.7 gi|407464856|ref|YP_006775738.1| - 0.0028 15.9 0.0 0.023 12.9 0.0 1.9 2 0 0 2 2 2 2 Protein of unknown function (DUF515) Rubredoxin PF00301.15 gi|407464857|ref|YP_006775739.1| - 0.0088 15.9 0.4 3.9 7.4 0.0 2.3 2 0 0 2 2 2 2 Rubredoxin Lar_restr_allev PF14354.1 gi|407464857|ref|YP_006775739.1| - 0.014 15.7 0.1 0.017 15.3 0.1 1.2 1 0 0 1 1 1 0 Restriction alleviation protein Lar DUF2082 PF09855.4 gi|407464857|ref|YP_006775739.1| - 0.07 12.9 1.4 0.13 12.1 1.0 1.4 1 1 0 1 1 1 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) HypA PF01155.14 gi|407464857|ref|YP_006775739.1| - 0.086 12.5 0.9 1.2 8.7 0.1 2.0 1 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family YdjO PF14169.1 gi|407464857|ref|YP_006775739.1| - 0.13 11.7 2.0 0.81 9.1 0.1 2.1 2 0 0 2 2 2 0 Cold-inducible protein YdjO Elf1 PF05129.8 gi|407464857|ref|YP_006775739.1| - 0.14 11.8 0.5 0.26 11.0 0.4 1.5 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zf-H2C2_2 PF13465.1 gi|407464857|ref|YP_006775739.1| - 0.19 12.1 1.3 7.2 7.0 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger double domain DUF2225 PF09986.4 gi|407464857|ref|YP_006775739.1| - 0.24 10.8 1.7 0.52 9.7 1.2 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) TF_Zn_Ribbon PF08271.7 gi|407464857|ref|YP_006775739.1| - 0.52 9.6 3.8 3.2 7.1 2.6 2.1 1 1 0 1 1 1 0 TFIIB zinc-binding TFIIS_C PF01096.13 gi|407464857|ref|YP_006775739.1| - 0.53 9.9 2.6 3.1 7.5 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) ILVD_EDD PF00920.16 gi|407464858|ref|YP_006775740.1| - 6.6e-218 724.3 6.6 7.4e-218 724.1 4.6 1.0 1 0 0 1 1 1 1 Dehydratase family DUF1263 PF06882.7 gi|407464858|ref|YP_006775740.1| - 0.081 12.5 0.0 1.6 8.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1263) HYR PF02494.11 gi|407464859|ref|YP_006775741.1| - 8e-19 67.4 38.6 3.2e-06 27.0 0.9 8.0 8 1 0 8 8 8 4 HYR domain Big_3 PF07523.7 gi|407464859|ref|YP_006775741.1| - 1.3 9.1 25.5 0.8 9.8 2.7 5.2 5 0 0 5 5 5 0 Bacterial Ig-like domain (group 3) Diphtheria_T PF02764.9 gi|407464860|ref|YP_006775742.1| - 0.1 12.3 0.2 3.4 7.4 0.0 2.1 1 1 1 2 2 2 0 Diphtheria toxin, T domain SVA PF05326.6 gi|407464861|ref|YP_006775743.1| - 0.023 14.4 0.2 0.023 14.4 0.2 1.2 1 0 0 1 1 1 0 Seminal vesicle autoantigen (SVA) GPS PF01825.16 gi|407464861|ref|YP_006775743.1| - 0.066 13.3 3.8 0.33 11.1 2.6 2.0 1 1 0 1 1 1 0 Latrophilin/CL-1-like GPS domain Toxin_17 PF08086.6 gi|407464861|ref|YP_006775743.1| - 0.87 9.7 4.0 1.8 8.6 2.8 1.5 1 1 0 1 1 1 0 Ergtoxin family Helicase_C_2 PF13307.1 gi|407464862|ref|YP_006775744.1| - 1.3e-22 80.5 0.0 3.1e-22 79.3 0.0 1.6 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.10 gi|407464862|ref|YP_006775744.1| - 1.8e-05 24.1 1.5 4.5e-05 22.9 0.3 2.1 2 0 0 2 2 2 1 DEAD_2 GIY-YIG PF01541.19 gi|407464863|ref|YP_006775745.1| - 9e-07 29.1 0.1 1.1e-06 28.8 0.1 1.2 1 0 0 1 1 1 1 GIY-YIG catalytic domain DUF2613 PF11021.3 gi|407464864|ref|YP_006775746.1| - 0.0012 18.5 0.1 0.0018 17.9 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2613) MacB_PCD PF12704.2 gi|407464864|ref|YP_006775746.1| - 0.12 11.9 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 MacB-like periplasmic core domain KSR1-SAM PF13543.1 gi|407464865|ref|YP_006775747.1| - 0.067 12.9 0.0 0.094 12.5 0.0 1.3 1 0 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 Peptidase_M10 PF00413.19 gi|407464867|ref|YP_006775749.1| - 8.5e-14 51.5 2.9 1.2e-12 47.8 0.6 2.5 2 1 0 2 2 2 1 Matrixin Peptidase_M66 PF10462.4 gi|407464867|ref|YP_006775749.1| - 4e-05 22.6 0.2 8.1e-05 21.6 0.2 1.4 1 0 0 1 1 1 1 Peptidase M66 Reprolysin_4 PF13583.1 gi|407464867|ref|YP_006775749.1| - 0.00018 21.1 0.2 0.0004 19.9 0.1 1.6 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_2 PF13574.1 gi|407464867|ref|YP_006775749.1| - 0.0011 19.0 0.9 0.0011 19.0 0.6 1.9 2 1 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.3 gi|407464867|ref|YP_006775749.1| - 0.0052 16.1 0.3 0.015 14.6 0.2 1.8 1 1 0 1 1 1 1 Dual-action HEIGH metallo-peptidase Reprolysin_5 PF13688.1 gi|407464867|ref|YP_006775749.1| - 0.0056 16.6 1.1 0.0062 16.4 0.1 1.6 2 0 0 2 2 2 1 Metallo-peptidase family M12 SNARE PF05739.14 gi|407464867|ref|YP_006775749.1| - 0.0073 15.9 2.1 0.018 14.7 1.5 1.6 1 0 0 1 1 1 1 SNARE domain Reprolysin_3 PF13582.1 gi|407464867|ref|YP_006775749.1| - 0.015 15.7 1.5 0.025 15.0 0.0 2.1 2 1 0 2 2 2 0 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.3 gi|407464867|ref|YP_006775749.1| - 0.016 13.6 0.0 0.021 13.2 0.0 1.2 1 0 0 1 1 1 0 Putative peptidase family Peptidase_M54 PF07998.6 gi|407464867|ref|YP_006775749.1| - 0.021 14.5 0.1 0.05 13.3 0.1 1.6 1 0 0 1 1 1 0 Peptidase family M54 DUF2051 PF09738.4 gi|407464867|ref|YP_006775749.1| - 0.026 13.8 2.9 0.038 13.2 2.0 1.2 1 0 0 1 1 1 0 Double stranded RNA binding protein (DUF2051) Peptidase_M8 PF01457.11 gi|407464867|ref|YP_006775749.1| - 0.037 12.3 0.0 0.054 11.8 0.0 1.2 1 0 0 1 1 1 0 Leishmanolysin Snf7 PF03357.16 gi|407464867|ref|YP_006775749.1| - 0.039 13.3 4.1 0.08 12.3 2.9 1.5 1 0 0 1 1 1 0 Snf7 Reprolysin PF01421.14 gi|407464867|ref|YP_006775749.1| - 0.042 13.4 0.6 0.12 11.9 0.0 1.9 2 0 0 2 2 2 0 Reprolysin (M12B) family zinc metalloprotease Terminase_4 PF05119.7 gi|407464867|ref|YP_006775749.1| - 0.061 13.4 0.2 0.22 11.6 0.1 1.9 2 0 0 2 2 2 0 Phage terminase, small subunit ISG65-75 PF11727.3 gi|407464867|ref|YP_006775749.1| - 0.072 12.1 0.7 0.26 10.2 0.0 2.0 2 0 0 2 2 2 0 Invariant surface glycoprotein DUF3859 PF12975.2 gi|407464867|ref|YP_006775749.1| - 0.091 12.4 0.0 0.2 11.3 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3859) DUF1025 PF06262.6 gi|407464867|ref|YP_006775749.1| - 0.099 12.4 0.3 0.58 9.9 0.0 2.1 2 0 0 2 2 2 0 Possibl zinc metallo-peptidase LOH1CR12 PF10158.4 gi|407464867|ref|YP_006775749.1| - 0.47 10.2 8.3 8.5 6.1 5.8 2.3 1 1 0 1 1 1 0 Tumour suppressor protein Astacin PF01400.19 gi|407464867|ref|YP_006775749.1| - 0.73 9.1 8.5 0.059 12.7 1.4 2.4 2 1 0 2 2 2 0 Astacin (Peptidase family M12A) IncA PF04156.9 gi|407464867|ref|YP_006775749.1| - 0.75 9.3 5.5 1.3 8.5 3.8 1.3 1 0 0 1 1 1 0 IncA protein NYD-SP28 PF14772.1 gi|407464867|ref|YP_006775749.1| - 5.1 7.2 9.0 0.43 10.6 2.2 2.2 3 1 0 3 3 2 0 Sperm tail C1_4 PF07975.7 gi|407464868|ref|YP_006775750.1| - 0.14 12.1 8.0 0.3 11.1 5.5 1.7 1 1 0 1 1 1 0 TFIIH C1-like domain zinc-ribbons_6 PF07191.7 gi|407464869|ref|YP_006775751.1| - 0.034 13.9 9.0 0.25 11.1 6.3 1.9 1 1 0 1 1 1 0 zinc-ribbons PhnA_Zn_Ribbon PF08274.7 gi|407464869|ref|YP_006775751.1| - 0.067 12.9 3.4 0.41 10.4 0.2 2.5 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zf-C4_Topoisom PF01396.14 gi|407464869|ref|YP_006775751.1| - 0.13 11.7 1.2 4.2 6.9 0.1 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-TFIIB PF13453.1 gi|407464869|ref|YP_006775751.1| - 0.16 11.1 6.1 3.1 7.0 4.3 2.2 1 1 1 2 2 2 0 Transcription factor zinc-finger zinc_ribbon_2 PF13240.1 gi|407464869|ref|YP_006775751.1| - 0.19 11.2 4.1 0.71 9.4 0.6 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-RING_4 PF14570.1 gi|407464869|ref|YP_006775751.1| - 0.23 11.0 9.1 17 5.1 6.4 2.5 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain DUF329 PF03884.9 gi|407464869|ref|YP_006775751.1| - 0.33 10.5 4.3 4.5 6.9 0.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF329) zf-C3HC4_3 PF13920.1 gi|407464869|ref|YP_006775751.1| - 0.39 10.4 4.0 2.8 7.6 0.5 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.2 gi|407464869|ref|YP_006775751.1| - 0.52 10.1 6.9 1.5 8.7 4.8 1.8 1 1 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.2 gi|407464869|ref|YP_006775751.1| - 0.54 10.1 4.6 0.72 9.6 0.1 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-Di19 PF05605.7 gi|407464869|ref|YP_006775751.1| - 0.78 9.9 7.5 1.7 8.8 5.2 1.6 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Ogr_Delta PF04606.7 gi|407464869|ref|YP_006775751.1| - 0.82 9.3 6.8 1 9.1 0.1 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-FCS PF06467.9 gi|407464869|ref|YP_006775751.1| - 2.2 8.0 6.2 0.82 9.3 0.3 2.3 2 1 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif YdjO PF14169.1 gi|407464869|ref|YP_006775751.1| - 2.6 7.5 5.7 7.2 6.1 0.4 2.2 1 1 1 2 2 2 0 Cold-inducible protein YdjO Fer2_4 PF13510.1 gi|407464869|ref|YP_006775751.1| - 3.5 7.4 5.9 4.6 7.1 1.2 2.0 1 1 1 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain OrfB_Zn_ribbon PF07282.6 gi|407464869|ref|YP_006775751.1| - 3.6 7.3 7.3 2.8 7.6 0.5 2.1 1 1 0 2 2 2 0 Putative transposase DNA-binding domain Sgf11 PF08209.6 gi|407464869|ref|YP_006775751.1| - 4.3 6.7 7.0 1.3 8.3 0.2 2.7 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) zf-ISL3 PF14690.1 gi|407464869|ref|YP_006775751.1| - 7.9 6.5 6.3 3.6 7.7 0.5 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 IBR PF01485.16 gi|407464869|ref|YP_006775751.1| - 8.9 6.2 8.2 69 3.4 5.7 2.0 1 1 0 1 1 1 0 IBR domain Ribosomal_L18ae PF01775.12 gi|407464872|ref|YP_006775754.1| - 0.11 12.4 0.1 0.69 9.8 0.0 1.7 1 1 1 2 2 2 0 Ribosomal L18ae/LX protein domain GDC-P PF02347.11 gi|407464877|ref|YP_006775759.1| - 0.059 12.0 0.1 0.071 11.7 0.1 1.0 1 0 0 1 1 1 0 Glycine cleavage system P-protein Rhodanese PF00581.15 gi|407464878|ref|YP_006775760.1| - 1.1e-14 54.7 0.0 1.3e-14 54.4 0.0 1.0 1 0 0 1 1 1 1 Rhodanese-like domain DZR PF12773.2 gi|407464879|ref|YP_006775761.1| - 0.025 14.3 0.7 0.042 13.6 0.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon Glutaredoxin2_C PF04399.8 gi|407464879|ref|YP_006775761.1| - 0.025 14.1 0.3 0.03 13.9 0.2 1.0 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain FYVE PF01363.16 gi|407464879|ref|YP_006775761.1| - 0.029 14.2 1.4 0.052 13.4 1.0 1.4 1 0 0 1 1 1 0 FYVE zinc finger zf-UBP PF02148.14 gi|407464879|ref|YP_006775761.1| - 0.034 14.2 0.3 0.036 14.1 0.2 1.2 1 0 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein DAN PF03045.10 gi|407464879|ref|YP_006775761.1| - 0.073 12.4 1.8 0.11 11.9 1.3 1.3 1 1 0 1 1 1 0 DAN domain ING PF12998.2 gi|407464879|ref|YP_006775761.1| - 0.098 12.9 2.6 0.12 12.6 1.8 1.2 1 0 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding Tnp_zf-ribbon_2 PF13842.1 gi|407464879|ref|YP_006775761.1| - 0.1 13.0 4.7 0.35 11.3 3.3 1.9 1 1 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon Methyltrans_RNA PF04452.9 gi|407464879|ref|YP_006775761.1| - 0.12 11.4 0.8 0.14 11.2 0.6 1.1 1 0 0 1 1 1 0 RNA methyltransferase C1_1 PF00130.17 gi|407464879|ref|YP_006775761.1| - 0.14 11.9 2.2 0.21 11.3 1.5 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-4CXXC_R1 PF10497.4 gi|407464879|ref|YP_006775761.1| - 0.17 12.0 2.4 0.2 11.7 1.6 1.3 1 1 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Zn_Tnp_IS1595 PF12760.2 gi|407464879|ref|YP_006775761.1| - 0.22 11.3 3.1 0.33 10.7 2.1 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain TPD PF14811.1 gi|407464879|ref|YP_006775761.1| - 0.22 11.0 2.6 0.25 10.8 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function TPD sequence-motif 4HB_MCP_1 PF12729.2 gi|407464879|ref|YP_006775761.1| - 0.29 10.4 2.8 0.37 10.1 1.9 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction DUF3268 PF11672.3 gi|407464879|ref|YP_006775761.1| - 0.34 10.9 4.3 0.92 9.6 3.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3268) PHD_2 PF13831.1 gi|407464879|ref|YP_006775761.1| - 0.36 10.1 3.7 0.57 9.5 0.3 2.1 2 0 0 2 2 2 0 PHD-finger PHD PF00628.24 gi|407464879|ref|YP_006775761.1| - 1.2 8.8 7.4 12 5.7 5.1 2.2 1 1 0 1 1 1 0 PHD-finger Cys_rich_KTR PF14205.1 gi|407464879|ref|YP_006775761.1| - 3 7.3 5.1 1.8 8.0 0.3 2.4 1 1 0 2 2 2 0 Cysteine-rich KTR MutS_III PF05192.13 gi|407464880|ref|YP_006775762.1| - 0.12 12.1 0.6 0.21 11.3 0.2 1.6 1 1 1 2 2 2 0 MutS domain III DUF1910 PF08928.5 gi|407464880|ref|YP_006775762.1| - 0.49 10.4 7.2 4.6 7.2 0.3 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF1910) PDDEXK_1 PF12705.2 gi|407464881|ref|YP_006775763.1| - 8.2e-13 48.3 1.6 3.2e-11 43.0 1.1 2.1 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily DUF3799 PF12684.2 gi|407464881|ref|YP_006775763.1| - 0.00079 18.8 2.9 0.00079 18.8 2.0 1.7 2 1 0 2 2 2 1 PDDEXK-like domain of unknown function (DUF3799) DUF2800 PF10926.3 gi|407464881|ref|YP_006775763.1| - 0.0031 16.7 0.4 0.028 13.5 0.1 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF2800) CheZ PF04344.8 gi|407464881|ref|YP_006775763.1| - 0.016 14.9 1.1 0.035 13.7 0.3 1.8 1 1 1 2 2 2 0 Chemotaxis phosphatase, CheZ Exo5 PF09810.4 gi|407464881|ref|YP_006775763.1| - 0.028 13.6 0.9 0.05 12.8 0.7 1.4 1 1 0 1 1 1 0 Exonuclease V - a 5' deoxyribonuclease PRESAN PF09687.5 gi|407464881|ref|YP_006775763.1| - 0.57 10.2 5.5 1.6 8.8 0.1 2.4 2 1 0 2 2 2 0 Plasmodium RESA N-terminal DEAD PF00270.24 gi|407464883|ref|YP_006775765.1| - 1e-27 96.6 0.0 4.4e-27 94.6 0.0 2.1 3 0 0 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|407464883|ref|YP_006775765.1| - 5.9e-14 51.6 0.2 4.6e-13 48.8 0.1 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DUF1998 PF09369.5 gi|407464883|ref|YP_006775765.1| - 6.8e-08 32.9 0.0 2.4e-07 31.2 0.0 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) ResIII PF04851.10 gi|407464883|ref|YP_006775765.1| - 4.3e-07 29.9 0.1 2.1e-06 27.6 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit TrmB PF01978.14 gi|407464884|ref|YP_006775766.1| - 4.7e-16 58.2 0.2 7.8e-16 57.5 0.0 1.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.4 gi|407464884|ref|YP_006775766.1| - 0.00068 19.4 0.3 0.0047 16.7 0.1 2.0 1 1 1 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_24 PF13412.1 gi|407464884|ref|YP_006775766.1| - 0.0045 16.3 0.0 0.0082 15.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Mga PF05043.8 gi|407464884|ref|YP_006775766.1| - 0.014 15.6 0.4 0.026 14.8 0.3 1.4 1 0 0 1 1 1 0 Mga helix-turn-helix domain TFIIE_alpha PF02002.12 gi|407464884|ref|YP_006775766.1| - 0.021 14.3 0.1 0.028 13.9 0.0 1.4 1 1 0 1 1 1 0 TFIIE alpha subunit S10_plectin PF03501.10 gi|407464884|ref|YP_006775766.1| - 0.028 14.2 0.1 0.046 13.5 0.0 1.3 1 0 0 1 1 1 0 Plectin/S10 domain HTH_9 PF08221.6 gi|407464884|ref|YP_006775766.1| - 0.034 13.9 0.0 0.077 12.8 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Baculo_LEF5 PF04838.7 gi|407464884|ref|YP_006775766.1| - 0.065 12.9 0.1 0.075 12.7 0.1 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 Penicillinase_R PF03965.11 gi|407464884|ref|YP_006775766.1| - 0.073 13.1 0.0 0.16 12.0 0.0 1.7 2 1 0 2 2 2 0 Penicillinase repressor HTH_IclR PF09339.5 gi|407464884|ref|YP_006775766.1| - 0.14 11.7 0.0 0.25 10.9 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain Chorismate_bind PF00425.13 gi|407464885|ref|YP_006775767.1| - 6.7e-91 304.1 0.0 3.1e-90 301.9 0.0 1.8 2 0 0 2 2 2 1 chorismate binding enzyme Anth_synt_I_N PF04715.8 gi|407464885|ref|YP_006775767.1| - 6.7e-21 74.7 0.1 3.7e-18 65.8 0.0 2.9 3 0 0 3 3 3 2 Anthranilate synthase component I, N terminal region GATase PF00117.23 gi|407464886|ref|YP_006775768.1| - 4.5e-56 189.3 0.1 5e-56 189.2 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|407464886|ref|YP_006775768.1| - 6.6e-11 42.0 0.1 1.3e-10 41.1 0.1 1.4 1 1 0 1 1 1 1 Peptidase C26 Response_reg PF00072.19 gi|407464886|ref|YP_006775768.1| - 0.041 13.8 0.0 0.089 12.8 0.0 1.5 1 0 0 1 1 1 0 Response regulator receiver domain DJ-1_PfpI PF01965.19 gi|407464886|ref|YP_006775768.1| - 0.045 13.1 0.0 0.063 12.7 0.0 1.5 1 1 0 1 1 1 0 DJ-1/PfpI family Glycos_transf_3 PF00591.16 gi|407464887|ref|YP_006775769.1| - 1.2e-79 267.3 1.0 1.2e-79 267.3 0.7 1.6 2 0 0 2 2 2 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|407464887|ref|YP_006775769.1| - 1.4e-16 59.7 0.6 2.8e-16 58.8 0.4 1.5 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain IGPS PF00218.16 gi|407464888|ref|YP_006775770.1| - 6.3e-69 231.8 1.1 7.4e-69 231.6 0.7 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.14 gi|407464888|ref|YP_006775770.1| - 6.8e-06 25.7 0.1 1.7e-05 24.4 0.0 1.6 1 1 1 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain NanE PF04131.9 gi|407464888|ref|YP_006775770.1| - 0.00012 21.0 0.6 0.00022 20.2 0.2 1.7 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase DUF556 PF04476.8 gi|407464888|ref|YP_006775770.1| - 0.0022 17.2 0.1 0.0093 15.2 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF556) AP_endonuc_2 PF01261.19 gi|407464888|ref|YP_006775770.1| - 0.0028 16.9 0.0 0.0054 16.0 0.0 1.4 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel PcrB PF01884.12 gi|407464888|ref|YP_006775770.1| - 0.0085 15.3 0.1 0.018 14.3 0.0 1.6 2 0 0 2 2 2 1 PcrB family His_biosynth PF00977.16 gi|407464888|ref|YP_006775770.1| - 0.0086 15.3 0.0 0.017 14.4 0.0 1.6 1 0 0 1 1 1 1 Histidine biosynthesis protein Cellulase PF00150.13 gi|407464888|ref|YP_006775770.1| - 0.01 15.0 0.1 0.017 14.3 0.1 1.3 1 0 0 1 1 1 0 Cellulase (glycosyl hydrolase family 5) FMN_dh PF01070.13 gi|407464888|ref|YP_006775770.1| - 0.012 14.4 0.0 0.041 12.7 0.0 1.8 1 1 0 1 1 1 0 FMN-dependent dehydrogenase Glyco_hydro_97 PF10566.4 gi|407464888|ref|YP_006775770.1| - 0.062 12.4 0.0 0.094 11.7 0.0 1.2 1 0 0 1 1 1 0 Glycoside hydrolase 97 ThiG PF05690.9 gi|407464888|ref|YP_006775770.1| - 0.068 12.2 0.0 0.14 11.1 0.0 1.5 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG PALP PF00291.20 gi|407464889|ref|YP_006775771.1| - 6.4e-43 147.1 1.3 8.7e-43 146.6 0.9 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Succ_CoA_lig PF13607.1 gi|407464889|ref|YP_006775771.1| - 0.073 12.6 1.1 0.093 12.3 0.1 1.6 2 0 0 2 2 2 0 Succinyl-CoA ligase like flavodoxin domain SPK PF04435.13 gi|407464889|ref|YP_006775771.1| - 0.11 12.4 0.1 0.31 11.0 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF545) Trp_syntA PF00290.15 gi|407464890|ref|YP_006775772.1| - 4.8e-83 277.6 2.4 5.5e-83 277.4 1.7 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.16 gi|407464890|ref|YP_006775772.1| - 2.6e-08 33.4 0.1 1.4e-07 31.0 0.1 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein DHO_dh PF01180.16 gi|407464890|ref|YP_006775772.1| - 2.2e-07 30.1 0.7 3e-07 29.7 0.5 1.3 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase FMN_dh PF01070.13 gi|407464890|ref|YP_006775772.1| - 5.6e-06 25.4 0.1 2.1e-05 23.5 0.0 1.9 2 1 1 3 3 3 1 FMN-dependent dehydrogenase PcrB PF01884.12 gi|407464890|ref|YP_006775772.1| - 9.4e-06 25.0 1.8 9.3e-05 21.7 0.5 2.4 2 1 0 2 2 2 1 PcrB family IMPDH PF00478.20 gi|407464890|ref|YP_006775772.1| - 0.00015 20.7 1.5 0.00069 18.6 0.8 2.1 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain BtpA PF03437.10 gi|407464890|ref|YP_006775772.1| - 0.00049 19.4 1.2 0.035 13.3 0.5 2.3 1 1 1 2 2 2 1 BtpA family ThiG PF05690.9 gi|407464890|ref|YP_006775772.1| - 0.0011 18.1 0.1 0.0027 16.8 0.1 1.6 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG IGPS PF00218.16 gi|407464890|ref|YP_006775772.1| - 0.0021 17.1 0.1 0.094 11.7 0.0 2.2 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase NanE PF04131.9 gi|407464890|ref|YP_006775772.1| - 0.0023 16.9 0.8 0.019 13.9 0.1 2.5 3 0 0 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase PEP_mutase PF13714.1 gi|407464890|ref|YP_006775772.1| - 0.011 14.9 0.1 2.6 7.1 0.0 2.8 1 1 1 3 3 3 0 Phosphoenolpyruvate phosphomutase TGT PF01702.13 gi|407464890|ref|YP_006775772.1| - 0.011 15.0 0.0 0.12 11.6 0.0 2.3 2 1 0 2 2 2 0 Queuine tRNA-ribosyltransferase NMO PF03060.10 gi|407464890|ref|YP_006775772.1| - 0.039 13.1 0.0 0.18 10.9 0.0 1.9 2 0 0 2 2 2 0 Nitronate monooxygenase TMP-TENI PF02581.12 gi|407464890|ref|YP_006775772.1| - 0.041 12.9 2.3 0.18 10.9 1.6 2.3 1 1 0 1 1 1 0 Thiamine monophosphate synthase/TENI Ribul_P_3_epim PF00834.14 gi|407464890|ref|YP_006775772.1| - 0.091 11.8 0.1 0.15 11.1 0.1 1.4 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family CTP_synth_N PF06418.9 gi|407464891|ref|YP_006775773.1| - 5.2e-123 409.5 0.1 7.9e-123 408.9 0.1 1.3 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.23 gi|407464891|ref|YP_006775773.1| - 1.1e-48 165.2 0.0 2.1e-48 164.3 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|407464891|ref|YP_006775773.1| - 1.7e-12 47.2 0.0 9.4e-12 44.8 0.0 2.0 2 0 0 2 2 2 1 Peptidase C26 CbiA PF01656.18 gi|407464891|ref|YP_006775773.1| - 2.9e-06 26.8 0.1 5.9e-06 25.8 0.1 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Peptidase_M10 PF00413.19 gi|407464892|ref|YP_006775774.1| - 3.9e-09 36.4 0.0 4.8e-09 36.1 0.0 1.1 1 0 0 1 1 1 1 Matrixin Reprolysin_4 PF13583.1 gi|407464892|ref|YP_006775774.1| - 0.00034 20.2 0.0 0.00054 19.5 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.3 gi|407464892|ref|YP_006775774.1| - 0.0004 19.7 0.0 0.00054 19.3 0.0 1.3 1 0 0 1 1 1 1 Dual-action HEIGH metallo-peptidase Reprolysin_2 PF13574.1 gi|407464892|ref|YP_006775774.1| - 0.0041 17.1 0.1 0.0045 17.0 0.0 1.5 1 1 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like DUF2268 PF10026.4 gi|407464892|ref|YP_006775774.1| - 0.0052 16.1 0.0 0.0082 15.5 0.0 1.4 1 0 0 1 1 1 1 Predicted Zn-dependent protease (DUF2268) Peptidase_M54 PF07998.6 gi|407464892|ref|YP_006775774.1| - 0.0057 16.4 0.1 0.01 15.6 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M54 Peptidase_M66 PF10462.4 gi|407464892|ref|YP_006775774.1| - 0.0074 15.1 0.1 0.02 13.7 0.0 1.6 2 0 0 2 2 2 1 Peptidase M66 Reprolysin_3 PF13582.1 gi|407464892|ref|YP_006775774.1| - 0.0076 16.7 0.1 0.013 16.0 0.1 1.4 1 1 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.1 gi|407464892|ref|YP_006775774.1| - 0.008 16.1 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 Astacin PF01400.19 gi|407464892|ref|YP_006775774.1| - 0.0084 15.5 0.0 0.0084 15.5 0.0 1.6 2 0 0 2 2 2 1 Astacin (Peptidase family M12A) Metallopep PF12044.3 gi|407464892|ref|YP_006775774.1| - 0.015 13.7 0.2 0.054 11.9 0.1 1.8 2 0 0 2 2 2 0 Putative peptidase family Peptidase_M43 PF05572.8 gi|407464892|ref|YP_006775774.1| - 0.018 14.6 0.0 0.031 13.8 0.0 1.4 1 0 0 1 1 1 0 Pregnancy-associated plasma protein-A Apyrase PF06079.6 gi|407464892|ref|YP_006775774.1| - 0.022 13.9 0.3 0.026 13.7 0.2 1.1 1 0 0 1 1 1 0 Apyrase DUF1025 PF06262.6 gi|407464892|ref|YP_006775774.1| - 0.027 14.2 0.1 0.064 13.0 0.1 1.6 1 0 0 1 1 1 0 Possibl zinc metallo-peptidase Reprolysin PF01421.14 gi|407464892|ref|YP_006775774.1| - 0.041 13.4 0.6 0.064 12.8 0.0 1.6 2 0 0 2 2 2 0 Reprolysin (M12B) family zinc metalloprotease NAD_kinase PF01513.16 gi|407464893|ref|YP_006775775.1| - 5.1e-34 117.3 0.4 7.2e-34 116.8 0.3 1.1 1 0 0 1 1 1 1 ATP-NAD kinase TrmB PF01978.14 gi|407464893|ref|YP_006775775.1| - 1.7e-06 27.6 3.3 0.001 18.7 0.2 3.6 3 1 1 4 4 4 2 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|407464893|ref|YP_006775775.1| - 2.5e-05 23.9 1.9 6.3e-05 22.5 0.1 2.4 3 0 0 3 3 3 1 MarR family HTH_27 PF13463.1 gi|407464893|ref|YP_006775775.1| - 0.00015 21.9 0.4 0.00033 20.9 0.3 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|407464893|ref|YP_006775775.1| - 0.00016 21.0 0.8 0.00076 18.8 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_pol_Rpc34 PF05158.7 gi|407464893|ref|YP_006775775.1| - 0.00024 20.3 0.5 0.00037 19.7 0.3 1.2 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit MarR_2 PF12802.2 gi|407464893|ref|YP_006775775.1| - 0.00055 19.5 0.1 0.0012 18.4 0.0 1.6 1 0 0 1 1 1 1 MarR family FeoC PF09012.5 gi|407464893|ref|YP_006775775.1| - 0.057 13.1 0.4 0.15 11.8 0.0 1.8 2 0 0 2 2 2 0 FeoC like transcriptional regulator TFIIE_alpha PF02002.12 gi|407464893|ref|YP_006775775.1| - 0.084 12.3 0.6 0.36 10.3 0.2 2.2 1 1 1 2 2 2 0 TFIIE alpha subunit HTH_36 PF13730.1 gi|407464893|ref|YP_006775775.1| - 0.093 12.8 0.6 5.6 7.1 0.1 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain PfkB PF00294.19 gi|407464894|ref|YP_006775776.1| - 5.5e-13 48.7 0.0 1.3e-12 47.4 0.0 1.6 1 1 0 1 1 1 1 pfkB family carbohydrate kinase NTNH_C PF08470.5 gi|407464894|ref|YP_006775776.1| - 0.0034 17.0 0.2 0.0059 16.2 0.1 1.4 1 0 0 1 1 1 1 Nontoxic nonhaemagglutinin C-terminal Phos_pyr_kin PF08543.7 gi|407464894|ref|YP_006775776.1| - 0.055 12.6 0.0 0.085 12.0 0.0 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Ribosomal_S26e PF01283.14 gi|407464895|ref|YP_006775777.1| - 2.1e-33 114.9 2.2 2.3e-33 114.8 1.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S26e zf-ribbon_3 PF13248.1 gi|407464895|ref|YP_006775777.1| - 0.031 13.4 0.4 0.076 12.2 0.0 1.8 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|407464895|ref|YP_006775777.1| - 0.1 12.4 0.6 0.23 11.2 0.4 1.6 1 1 0 1 1 1 0 Double zinc ribbon zf-dskA_traR PF01258.12 gi|407464895|ref|YP_006775777.1| - 0.11 12.2 0.2 5.7 6.7 0.0 2.3 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger zinc_ribbon_5 PF13719.1 gi|407464895|ref|YP_006775777.1| - 0.29 10.7 2.5 0.64 9.6 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|407464895|ref|YP_006775777.1| - 0.53 10.0 3.0 0.63 9.7 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain TFIIS_C PF01096.13 gi|407464895|ref|YP_006775777.1| - 0.6 9.7 2.9 9.6 5.9 0.1 2.7 2 1 1 3 3 3 0 Transcription factor S-II (TFIIS) CDP-OH_P_transf PF01066.16 gi|407464896|ref|YP_006775778.1| - 4.2e-17 62.3 8.8 1.6e-16 60.4 6.1 1.9 1 1 0 1 1 1 1 CDP-alcohol phosphatidyltransferase PRRSV_2b PF07069.6 gi|407464896|ref|YP_006775778.1| - 0.71 10.2 0.0 0.71 10.2 0.0 3.2 3 0 0 3 3 3 0 Porcine reproductive and respiratory syndrome virus 2b DUF4131 PF13567.1 gi|407464896|ref|YP_006775778.1| - 8.4 5.7 7.2 4.6 6.6 0.4 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4131) Arginase PF00491.16 gi|407464897|ref|YP_006775779.1| - 1.7e-65 221.0 0.0 2.2e-65 220.7 0.0 1.0 1 0 0 1 1 1 1 Arginase family tRNA-Thr_ED PF08915.6 gi|407464898|ref|YP_006775780.1| - 2e-48 163.8 0.1 3.4e-48 163.1 0.1 1.4 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|407464898|ref|YP_006775780.1| - 2e-26 92.6 1.0 4.1e-26 91.6 0.7 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|407464898|ref|YP_006775780.1| - 3.9e-24 84.4 1.4 7.9e-24 83.4 1.0 1.5 1 0 0 1 1 1 1 Anticodon binding domain Pentapeptide PF00805.17 gi|407464899|ref|YP_006775781.1| - 6.4e-51 168.9 56.7 1.4e-12 46.5 3.4 5.4 1 1 7 8 8 8 7 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.1 gi|407464899|ref|YP_006775781.1| - 4.4e-19 68.0 1.0 6.7e-13 48.2 0.1 2.2 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.1 gi|407464899|ref|YP_006775781.1| - 4.3e-14 52.1 0.2 1.6e-05 24.6 0.0 3.9 1 1 2 3 3 3 2 Pentapeptide repeats (9 copies) DS PF01916.12 gi|407464901|ref|YP_006775783.1| - 2.3e-54 184.5 0.0 2.7e-54 184.3 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase THAP PF05485.7 gi|407464902|ref|YP_006775784.1| - 0.22 11.6 1.0 1 9.6 0.1 1.9 1 1 1 2 2 2 0 THAP domain Ribosomal_S25 PF03297.10 gi|407464903|ref|YP_006775785.1| - 1.2e-06 28.5 2.8 1.4e-06 28.2 1.9 1.0 1 0 0 1 1 1 1 S25 ribosomal protein TrmB PF01978.14 gi|407464903|ref|YP_006775785.1| - 0.00033 20.3 0.1 0.00043 19.9 0.1 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|407464903|ref|YP_006775785.1| - 0.0065 15.8 0.1 0.0091 15.3 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding EAP30 PF04157.11 gi|407464903|ref|YP_006775785.1| - 0.011 14.8 0.1 0.014 14.5 0.1 1.1 1 0 0 1 1 1 0 EAP30/Vps36 family MarR_2 PF12802.2 gi|407464903|ref|YP_006775785.1| - 0.016 14.8 0.0 0.022 14.4 0.0 1.2 1 0 0 1 1 1 0 MarR family DUF977 PF06163.6 gi|407464903|ref|YP_006775785.1| - 0.031 14.0 0.1 0.037 13.7 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) MarR PF01047.17 gi|407464903|ref|YP_006775785.1| - 0.069 12.8 0.0 0.099 12.3 0.0 1.2 1 0 0 1 1 1 0 MarR family ANT PF03374.9 gi|407464903|ref|YP_006775785.1| - 0.088 12.8 0.5 0.2 11.7 0.0 1.6 1 1 1 2 2 2 0 Phage antirepressor protein KilAC domain FeoC PF09012.5 gi|407464903|ref|YP_006775785.1| - 0.096 12.4 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_10 PF04967.7 gi|407464903|ref|YP_006775785.1| - 0.099 12.2 0.0 0.17 11.4 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain Cyclophil_like PF04126.8 gi|407464904|ref|YP_006775786.1| - 6.7e-11 41.8 0.0 7.6e-11 41.6 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin-like DUF3830 PF12903.2 gi|407464904|ref|YP_006775786.1| - 0.0054 16.1 0.0 0.0076 15.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3830) RNA_pol_Rpb6 PF01192.17 gi|407464905|ref|YP_006775787.1| - 1.3e-12 47.2 1.0 3.8e-12 45.7 0.0 2.2 2 0 0 2 2 2 1 RNA polymerase Rpb6 Herpes_UL14 PF03580.9 gi|407464905|ref|YP_006775787.1| - 0.0034 17.1 1.0 0.0055 16.4 0.7 1.3 1 0 0 1 1 1 1 Herpesvirus UL14-like protein Alba PF01918.16 gi|407464906|ref|YP_006775788.1| - 8.1e-12 44.5 0.7 1.1e-11 44.1 0.5 1.2 1 0 0 1 1 1 1 Alba Rpp20 PF12328.3 gi|407464906|ref|YP_006775788.1| - 0.046 13.3 0.8 0.065 12.8 0.5 1.4 1 1 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P HTH_19 PF12844.2 gi|407464907|ref|YP_006775789.1| - 8.4e-06 25.7 0.3 0.00014 21.8 0.0 2.2 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.17 gi|407464907|ref|YP_006775789.1| - 2.4e-05 24.1 0.0 6.4e-05 22.7 0.0 1.8 1 1 0 1 1 1 1 Helix-turn-helix HTH_23 PF13384.1 gi|407464907|ref|YP_006775789.1| - 0.016 14.8 0.0 0.03 13.9 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_11 PF08279.7 gi|407464907|ref|YP_006775789.1| - 0.035 13.7 0.7 0.077 12.6 0.0 1.8 2 0 0 2 2 2 0 HTH domain HTH_26 PF13443.1 gi|407464907|ref|YP_006775789.1| - 0.067 13.3 0.1 0.24 11.6 0.0 1.9 1 1 1 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.1 gi|407464907|ref|YP_006775789.1| - 0.12 12.2 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2551 PF10826.3 gi|407464907|ref|YP_006775789.1| - 0.14 12.0 0.0 17 5.3 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2551) Asn_synthase PF00733.16 gi|407464908|ref|YP_006775790.1| - 2.8e-35 122.0 0.0 1.2e-34 119.9 0.0 1.8 1 1 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|407464908|ref|YP_006775790.1| - 4.1e-05 22.6 0.1 6.8e-05 21.8 0.1 1.3 1 0 0 1 1 1 1 NAD synthase QueC PF06508.8 gi|407464908|ref|YP_006775790.1| - 5.7e-05 22.4 0.2 0.00018 20.8 0.2 1.7 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|407464908|ref|YP_006775790.1| - 0.00014 20.5 0.0 0.00026 19.6 0.0 1.5 1 1 0 1 1 1 1 tRNA methyl transferase ThiI PF02568.9 gi|407464908|ref|YP_006775790.1| - 0.0037 16.7 0.1 0.0075 15.7 0.0 1.5 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.15 gi|407464908|ref|YP_006775790.1| - 0.011 15.1 0.0 0.041 13.3 0.0 1.9 2 0 0 2 2 2 0 PP-loop family zf-ribbon_3 PF13248.1 gi|407464908|ref|YP_006775790.1| - 0.039 13.1 4.0 0.088 12.0 2.8 1.7 1 0 0 1 1 1 0 zinc-ribbon domain DZR PF12773.2 gi|407464908|ref|YP_006775790.1| - 0.05 13.4 1.2 0.12 12.2 0.8 1.5 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|407464908|ref|YP_006775790.1| - 0.23 10.9 4.9 0.63 9.6 3.4 1.7 1 1 0 1 1 1 0 zinc-ribbon domain YHS PF04945.8 gi|407464909|ref|YP_006775791.1| - 1.5e-11 43.9 0.2 1.9e-11 43.6 0.1 1.1 1 0 0 1 1 1 1 YHS domain ATPase-cat_bd PF12156.3 gi|407464909|ref|YP_006775791.1| - 5.8e-05 23.5 0.3 7.1e-05 23.2 0.2 1.1 1 0 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase Arc_trans_TRASH PF08394.5 gi|407464909|ref|YP_006775791.1| - 0.00035 20.6 0.7 0.00049 20.1 0.5 1.3 1 0 0 1 1 1 1 Archaeal TRASH domain zf-FCS PF06467.9 gi|407464909|ref|YP_006775791.1| - 0.0081 15.7 0.6 0.0094 15.5 0.4 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif CAP_GLY PF01302.20 gi|407464909|ref|YP_006775791.1| - 0.0086 15.7 0.0 0.0098 15.5 0.0 1.1 1 0 0 1 1 1 1 CAP-Gly domain Ta0938 PF11494.3 gi|407464909|ref|YP_006775791.1| - 0.027 14.5 0.2 0.027 14.5 0.1 1.1 1 0 0 1 1 1 0 Ta0938 zf-H2C2_2 PF13465.1 gi|407464909|ref|YP_006775791.1| - 0.82 10.0 4.1 0.75 10.2 2.0 1.6 1 1 0 1 1 1 0 Zinc-finger double domain Aldo_ket_red PF00248.16 gi|407464912|ref|YP_006775794.1| - 2.7e-28 98.6 0.0 1.9e-27 95.8 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family DUF321 PF03778.8 gi|407464912|ref|YP_006775794.1| - 0.12 11.7 0.3 0.27 10.7 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF321) UbiA PF01040.13 gi|407464913|ref|YP_006775795.1| - 5.6e-30 104.4 15.2 5.6e-30 104.4 10.5 1.3 1 1 0 1 1 1 1 UbiA prenyltransferase family DUF2484 PF10658.4 gi|407464913|ref|YP_006775795.1| - 2.4 8.3 7.3 0.71 10.0 0.5 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2484) RecR PF02132.10 gi|407464914|ref|YP_006775796.1| - 0.005 16.2 1.6 0.03 13.7 0.0 2.2 2 0 0 2 2 2 1 RecR protein zf-ribbon_3 PF13248.1 gi|407464914|ref|YP_006775796.1| - 0.011 14.8 0.2 0.022 13.9 0.1 1.5 1 0 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|407464914|ref|YP_006775796.1| - 0.016 14.6 5.2 0.18 11.3 0.4 2.2 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit DUF2797 PF10977.3 gi|407464914|ref|YP_006775796.1| - 0.052 13.1 0.6 0.054 13.1 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) DUF2750 PF11042.3 gi|407464914|ref|YP_006775796.1| - 0.098 12.6 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2750) DZR PF12773.2 gi|407464914|ref|YP_006775796.1| - 0.21 11.4 1.4 0.37 10.6 1.0 1.5 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|407464914|ref|YP_006775796.1| - 0.31 10.5 0.3 0.31 10.5 0.2 1.9 1 1 1 2 2 2 0 zinc-ribbon domain Elf1 PF05129.8 gi|407464914|ref|YP_006775796.1| - 0.32 10.7 3.8 0.64 9.7 0.4 2.1 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like Big_1 PF02369.11 gi|407464915|ref|YP_006775797.1| - 0.0058 16.5 9.5 0.18 11.7 0.0 4.3 5 0 0 5 5 5 2 Bacterial Ig-like domain (group 1) Spore_YhaL PF14147.1 gi|407464915|ref|YP_006775797.1| - 0.07 12.5 2.2 0.14 11.6 1.5 1.5 1 0 0 1 1 1 0 Sporulation protein YhaL DUF1628 PF07790.6 gi|407464916|ref|YP_006775798.1| - 2.3e-05 25.0 1.7 7.1e-05 23.4 0.3 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) DUF461 PF04314.8 gi|407464916|ref|YP_006775798.1| - 0.066 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF461) DUF3899 PF13038.1 gi|407464916|ref|YP_006775798.1| - 0.87 9.7 3.5 1.7 8.8 2.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3899) CARDB PF07705.6 gi|407464917|ref|YP_006775799.1| - 0.034 14.2 2.3 2.3 8.3 0.0 3.1 4 0 0 4 4 4 0 CARDB Transglut_C PF00927.17 gi|407464917|ref|YP_006775799.1| - 0.055 13.5 3.8 0.065 13.2 0.0 2.8 4 0 0 4 4 4 0 Transglutaminase family, C-terminal ig like domain Glyco_trans_4_2 PF13477.1 gi|407464917|ref|YP_006775799.1| - 0.15 11.8 0.0 0.28 11.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like DUF2577 PF10844.3 gi|407464919|ref|YP_006775801.1| - 1.2 9.2 4.4 0.39 10.7 0.5 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF2577) Zn-ribbon_8 PF09723.5 gi|407464920|ref|YP_006775802.1| - 0.0023 17.8 9.4 2.9 7.9 0.4 4.2 4 0 0 4 4 4 3 Zinc ribbon domain zinc_ribbon_5 PF13719.1 gi|407464920|ref|YP_006775802.1| - 0.03 13.9 11.0 0.1 12.2 2.4 2.8 2 0 0 2 2 2 0 zinc-ribbon domain C1_4 PF07975.7 gi|407464920|ref|YP_006775802.1| - 0.032 14.2 5.7 0.13 12.2 1.5 2.5 2 0 0 2 2 2 0 TFIIH C1-like domain Rieske PF00355.21 gi|407464920|ref|YP_006775802.1| - 0.056 13.0 0.8 3.4 7.2 0.1 2.4 2 0 0 2 2 2 0 Rieske [2Fe-2S] domain zinc_ribbon_4 PF13717.1 gi|407464920|ref|YP_006775802.1| - 0.23 11.1 11.2 0.47 10.2 2.4 2.7 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.14 gi|407464920|ref|YP_006775802.1| - 0.3 10.7 7.3 35 4.1 2.3 3.1 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family Cys_rich_KTR PF14205.1 gi|407464920|ref|YP_006775802.1| - 1.8 8.0 7.3 0.29 10.6 0.2 3.1 3 0 0 3 3 3 0 Cysteine-rich KTR zinc-ribbons_6 PF07191.7 gi|407464920|ref|YP_006775802.1| - 2.4 7.9 11.0 2.4 8.0 3.0 2.6 1 1 2 3 3 3 0 zinc-ribbons Zn_Tnp_IS1595 PF12760.2 gi|407464920|ref|YP_006775802.1| - 2.7 7.8 7.1 8.5 6.2 1.0 2.6 2 0 0 2 2 2 0 Transposase zinc-ribbon domain T2SE PF00437.15 gi|407464921|ref|YP_006775803.1| - 1.2e-49 168.6 0.0 2.2e-49 167.7 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.13 gi|407464921|ref|YP_006775803.1| - 0.00053 19.5 0.1 0.0012 18.3 0.0 1.5 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_29 PF13555.1 gi|407464921|ref|YP_006775803.1| - 0.00063 19.2 0.0 0.0014 18.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_17 PF13207.1 gi|407464921|ref|YP_006775803.1| - 0.00069 20.4 0.4 0.0047 17.7 0.0 2.7 2 2 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|407464921|ref|YP_006775803.1| - 0.0018 18.5 2.6 0.0051 17.1 0.0 2.8 3 1 0 3 3 3 1 AAA domain ABC_tran PF00005.22 gi|407464921|ref|YP_006775803.1| - 0.015 15.6 0.1 0.052 13.8 0.0 1.9 2 0 0 2 2 2 0 ABC transporter AAA_19 PF13245.1 gi|407464921|ref|YP_006775803.1| - 0.03 14.0 0.0 0.065 12.9 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain Zeta_toxin PF06414.7 gi|407464921|ref|YP_006775803.1| - 0.054 12.5 0.0 0.094 11.8 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin DUF3104 PF11302.3 gi|407464921|ref|YP_006775803.1| - 0.059 12.7 0.0 1.3 8.5 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3104) TrwB_AAD_bind PF10412.4 gi|407464921|ref|YP_006775803.1| - 0.06 11.9 0.0 0.15 10.6 0.0 1.6 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain T2SF PF00482.18 gi|407464922|ref|YP_006775804.1| - 4e-14 52.6 0.3 4e-14 52.6 0.2 3.1 4 0 0 4 4 4 1 Type II secretion system (T2SS), protein F Virul_fac_BrkB PF03631.10 gi|407464922|ref|YP_006775804.1| - 0.0092 15.3 7.1 0.043 13.1 0.8 2.1 2 0 0 2 2 2 2 Virulence factor BrkB DUF4064 PF13273.1 gi|407464922|ref|YP_006775804.1| - 0.92 9.6 15.9 0.2 11.7 1.7 3.1 2 2 1 3 3 3 0 Protein of unknown function (DUF4064) T2SF PF00482.18 gi|407464923|ref|YP_006775805.1| - 5.5e-16 58.5 0.4 5.5e-16 58.5 0.3 1.8 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F DUF3671 PF12420.3 gi|407464923|ref|YP_006775805.1| - 0.0013 18.7 3.6 0.1 12.6 0.1 2.4 2 0 0 2 2 2 2 Protein of unknown function MtrG PF04210.8 gi|407464923|ref|YP_006775805.1| - 0.1 12.2 0.0 0.7 9.6 0.0 2.4 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G TrmB PF01978.14 gi|407464924|ref|YP_006775806.1| - 1.2e-13 50.5 0.0 4.4e-13 48.7 0.0 2.0 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|407464924|ref|YP_006775806.1| - 9.6e-07 28.3 0.1 1.7e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.2 gi|407464924|ref|YP_006775806.1| - 4.4e-05 23.1 0.1 7.8e-05 22.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.17 gi|407464924|ref|YP_006775806.1| - 0.00013 21.5 0.0 0.00038 20.1 0.0 1.8 1 0 0 1 1 1 1 MarR family Regulator_TrmB PF11495.3 gi|407464924|ref|YP_006775806.1| - 0.00031 19.8 0.0 0.00048 19.1 0.0 1.3 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_24 PF13412.1 gi|407464924|ref|YP_006775806.1| - 0.0079 15.5 0.1 0.014 14.7 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Lant_dehyd_C PF04738.8 gi|407464924|ref|YP_006775806.1| - 0.01 14.1 0.1 0.014 13.6 0.1 1.1 1 0 0 1 1 1 0 Lantibiotic dehydratase, C terminus HTH_11 PF08279.7 gi|407464924|ref|YP_006775806.1| - 0.043 13.4 0.1 0.11 12.1 0.1 1.7 1 0 0 1 1 1 0 HTH domain HTH_27 PF13463.1 gi|407464924|ref|YP_006775806.1| - 0.055 13.7 0.1 0.13 12.6 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HEAT_2 PF13646.1 gi|407464925|ref|YP_006775807.1| - 3.7e-13 49.5 0.7 1.1e-07 32.0 0.0 2.2 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.17 gi|407464925|ref|YP_006775807.1| - 0.00027 20.7 0.4 15 6.0 0.0 3.8 4 0 0 4 4 4 3 HEAT repeat HEAT_EZ PF13513.1 gi|407464925|ref|YP_006775807.1| - 0.026 14.9 0.0 40 4.8 0.0 3.6 4 0 0 4 4 4 0 HEAT-like repeat DUF3458 PF11940.3 gi|407464925|ref|YP_006775807.1| - 0.15 10.8 0.5 1.7 7.3 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3458) PufQ PF05398.6 gi|407464926|ref|YP_006775808.1| - 0.058 13.4 0.2 0.21 11.6 0.2 2.0 1 0 0 1 1 1 0 PufQ cytochrome subunit DUF3549 PF12069.3 gi|407464927|ref|YP_006775809.1| - 0.051 12.3 0.1 0.076 11.7 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3549) DUF1492 PF07374.6 gi|407464927|ref|YP_006775809.1| - 0.16 12.1 1.2 0.32 11.1 0.0 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1492) HicB PF05534.7 gi|407464928|ref|YP_006775810.1| - 0.00039 19.9 0.1 0.00072 19.0 0.0 1.4 1 0 0 1 1 1 1 HicB family EamA PF00892.15 gi|407464929|ref|YP_006775811.1| - 1.1e-27 96.5 31.5 2.9e-14 53.2 7.7 2.2 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|407464929|ref|YP_006775811.1| - 3.9e-09 36.7 30.2 0.00031 20.9 9.7 3.5 2 2 1 3 3 3 2 Multidrug resistance efflux transporter DUF914 PF06027.7 gi|407464929|ref|YP_006775811.1| - 0.0012 17.8 18.6 0.0025 16.6 12.9 1.6 1 1 0 1 1 1 1 Eukaryotic protein of unknown function (DUF914) Cation_ATPase_C PF00689.16 gi|407464929|ref|YP_006775811.1| - 0.93 8.9 21.6 0.8 9.1 5.9 3.6 3 1 0 3 3 3 0 Cation transporting ATPase, C-terminus DUF1129 PF06570.6 gi|407464929|ref|YP_006775811.1| - 3.7 6.8 17.3 0.013 14.7 4.4 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1129) TPT PF03151.11 gi|407464929|ref|YP_006775811.1| - 4.2 7.0 31.2 0.017 14.7 6.5 2.8 2 2 0 2 2 2 0 Triose-phosphate Transporter family Multi_Drug_Res PF00893.14 gi|407464929|ref|YP_006775811.1| - 7.4 7.1 22.3 2.8 8.4 1.6 3.4 2 1 1 3 3 3 0 Small Multidrug Resistance protein TrmB PF01978.14 gi|407464930|ref|YP_006775812.1| - 2.7e-12 46.1 0.0 5.3e-12 45.2 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|407464930|ref|YP_006775812.1| - 5.3e-05 22.7 0.0 0.00011 21.7 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|407464930|ref|YP_006775812.1| - 0.00024 20.7 0.0 0.00068 19.2 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_5 PF01022.15 gi|407464930|ref|YP_006775812.1| - 0.00034 20.2 0.0 0.0013 18.3 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|407464930|ref|YP_006775812.1| - 0.0024 17.5 0.1 0.036 13.7 0.0 2.4 1 1 1 2 2 2 1 MarR family DUF2250 PF10007.4 gi|407464930|ref|YP_006775812.1| - 0.0043 16.9 0.0 0.018 14.9 0.0 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_9 PF08221.6 gi|407464930|ref|YP_006775812.1| - 0.0047 16.7 0.0 0.087 12.7 0.0 2.6 2 1 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_20 PF12840.2 gi|407464930|ref|YP_006775812.1| - 0.0069 16.1 0.0 0.024 14.4 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|407464930|ref|YP_006775812.1| - 0.013 14.8 2.3 0.051 12.9 0.0 2.7 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_CodY PF08222.6 gi|407464930|ref|YP_006775812.1| - 0.02 14.2 0.0 0.89 8.9 0.0 2.7 2 0 0 2 2 2 0 CodY helix-turn-helix domain z-alpha PF02295.12 gi|407464930|ref|YP_006775812.1| - 0.043 13.5 0.0 0.17 11.7 0.0 2.0 2 0 0 2 2 2 0 Adenosine deaminase z-alpha domain Rrf2 PF02082.15 gi|407464930|ref|YP_006775812.1| - 0.064 13.3 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator LexA_DNA_bind PF01726.11 gi|407464930|ref|YP_006775812.1| - 0.084 12.4 0.1 0.47 10.0 0.0 2.3 2 1 0 2 2 2 0 LexA DNA binding domain HTH_27 PF13463.1 gi|407464930|ref|YP_006775812.1| - 0.14 12.4 0.0 0.27 11.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2203 PF09969.4 gi|407464931|ref|YP_006775813.1| - 1.7e-37 128.2 0.5 1.9e-37 128.1 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2203) Bet_v_1 PF00407.14 gi|407464931|ref|YP_006775813.1| - 0.0022 17.6 0.1 0.0049 16.4 0.1 1.6 2 0 0 2 2 2 1 Pathogenesis-related protein Bet v I family NOP5NT PF08156.8 gi|407464931|ref|YP_006775813.1| - 0.12 12.6 0.3 0.23 11.6 0.2 1.6 1 0 0 1 1 1 0 NOP5NT (NUC127) domain Pyridox_oxidase PF01243.15 gi|407464933|ref|YP_006775815.1| - 9.1e-11 41.6 0.0 1.1e-10 41.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|407464933|ref|YP_006775815.1| - 8e-08 32.2 0.0 9.5e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase SGL PF08450.7 gi|407464933|ref|YP_006775815.1| - 0.038 13.3 0.0 0.047 13.0 0.0 1.1 1 0 0 1 1 1 0 SMP-30/Gluconolaconase/LRE-like region Response_reg PF00072.19 gi|407464934|ref|YP_006775816.1| - 1.5e-15 57.2 0.0 1.6e-15 57.0 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain OS-D PF03392.8 gi|407464935|ref|YP_006775817.1| - 0.051 13.5 1.3 0.052 13.5 0.9 1.1 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D Response_reg PF00072.19 gi|407464936|ref|YP_006775818.1| - 1.7e-17 63.4 0.4 3e-17 62.6 0.3 1.4 1 0 0 1 1 1 1 Response regulator receiver domain DUF4162 PF13732.1 gi|407464936|ref|YP_006775818.1| - 0.074 13.5 1.8 0.31 11.5 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4162) HTH_IclR PF09339.5 gi|407464937|ref|YP_006775819.1| - 0.0038 16.7 0.0 0.006 16.1 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.14 gi|407464937|ref|YP_006775819.1| - 0.0052 16.4 0.0 0.011 15.4 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB CbiK PF06180.6 gi|407464937|ref|YP_006775819.1| - 0.013 14.6 0.3 0.024 13.7 0.1 1.5 2 0 0 2 2 2 0 Cobalt chelatase (CbiK) MotA_activ PF09114.5 gi|407464937|ref|YP_006775819.1| - 0.024 14.3 0.1 0.051 13.3 0.1 1.7 1 0 0 1 1 1 0 Transcription factor MotA, activation domain HTH_20 PF12840.2 gi|407464937|ref|YP_006775819.1| - 0.031 14.0 0.0 0.054 13.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain YopR_core PF09025.5 gi|407464937|ref|YP_006775819.1| - 0.034 14.1 0.0 0.074 13.0 0.0 1.4 1 1 0 1 1 1 0 YopR Core MarR_2 PF12802.2 gi|407464937|ref|YP_006775819.1| - 0.061 13.0 0.0 0.12 12.0 0.0 1.5 1 0 0 1 1 1 0 MarR family ETC_C1_NDUFA5 PF04716.9 gi|407464937|ref|YP_006775819.1| - 0.08 12.4 0.0 0.8 9.2 0.0 2.4 2 0 0 2 2 2 0 ETC complex I subunit conserved region DUF3924 PF13062.1 gi|407464938|ref|YP_006775820.1| - 0.021 14.6 0.2 0.024 14.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3924) RHH_3 PF12651.2 gi|407464938|ref|YP_006775820.1| - 0.13 11.9 0.5 0.39 10.4 0.4 1.9 1 1 0 1 1 1 0 Ribbon-helix-helix domain Methyltransf_31 PF13847.1 gi|407464939|ref|YP_006775821.1| - 1.3e-17 63.8 0.0 1.5e-17 63.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|407464939|ref|YP_006775821.1| - 1.2e-12 48.3 0.0 1.7e-12 47.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|407464939|ref|YP_006775821.1| - 4.8e-12 45.5 0.1 6.2e-12 45.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|407464939|ref|YP_006775821.1| - 4.8e-12 46.2 0.0 6.8e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|407464939|ref|YP_006775821.1| - 8e-12 45.4 0.0 1.2e-11 44.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|407464939|ref|YP_006775821.1| - 7.4e-10 38.7 0.0 1e-09 38.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.1 gi|407464939|ref|YP_006775821.1| - 1.2e-08 35.1 0.0 2.3e-08 34.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407464939|ref|YP_006775821.1| - 7e-08 32.3 0.0 7.9e-08 32.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|407464939|ref|YP_006775821.1| - 7e-07 28.7 0.0 9.3e-07 28.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.15 gi|407464939|ref|YP_006775821.1| - 4.3e-06 25.9 0.0 5.4e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.12 gi|407464939|ref|YP_006775821.1| - 8.7e-06 24.9 0.0 1.4e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_26 PF13659.1 gi|407464939|ref|YP_006775821.1| - 1.1e-05 25.4 0.0 1.4e-05 25.1 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|407464939|ref|YP_006775821.1| - 6.6e-05 22.1 0.1 9.3e-05 21.6 0.1 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_5 PF01795.14 gi|407464939|ref|YP_006775821.1| - 0.00045 19.6 0.0 0.001 18.3 0.0 1.5 2 0 0 2 2 2 1 MraW methylase family NodS PF05401.6 gi|407464939|ref|YP_006775821.1| - 0.0011 18.3 0.0 0.0015 17.9 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) FtsJ PF01728.14 gi|407464939|ref|YP_006775821.1| - 0.0017 18.3 0.1 0.0035 17.3 0.0 1.6 1 1 0 1 1 1 1 FtsJ-like methyltransferase GCD14 PF08704.5 gi|407464939|ref|YP_006775821.1| - 0.002 17.6 0.0 0.0027 17.2 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_32 PF13679.1 gi|407464939|ref|YP_006775821.1| - 0.0031 17.2 0.0 0.0042 16.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.12 gi|407464939|ref|YP_006775821.1| - 0.0041 16.0 0.0 0.0056 15.6 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin CmcI PF04989.7 gi|407464939|ref|YP_006775821.1| - 0.0098 15.2 0.0 0.023 13.9 0.0 1.6 1 1 1 2 2 2 1 Cephalosporin hydroxylase Pox_MCEL PF03291.11 gi|407464939|ref|YP_006775821.1| - 0.044 12.6 0.1 0.058 12.2 0.1 1.3 1 0 0 1 1 1 0 mRNA capping enzyme Rotamase_3 PF13616.1 gi|407464940|ref|YP_006775822.1| - 2.9e-27 95.2 0.2 3.7e-27 94.9 0.1 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.16 gi|407464940|ref|YP_006775822.1| - 6.6e-27 94.0 0.2 8.1e-27 93.8 0.2 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.1 gi|407464940|ref|YP_006775822.1| - 7.2e-11 42.7 0.0 8e-11 42.6 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain NTPase_I-T PF01931.13 gi|407464940|ref|YP_006775822.1| - 0.0027 17.4 0.0 0.0035 17.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF84 CENP-L PF13092.1 gi|407464941|ref|YP_006775823.1| - 0.025 14.3 0.0 0.031 14.0 0.0 1.2 1 1 0 1 1 1 0 Kinetochore complex Sim4 subunit Fta1 DUF2949 PF11165.3 gi|407464941|ref|YP_006775823.1| - 0.12 12.6 1.9 0.72 10.0 0.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2949) dCMP_cyt_deam_1 PF00383.17 gi|407464942|ref|YP_006775824.1| - 6.3e-26 89.9 1.3 8e-26 89.6 0.9 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region DNA_pol_B PF00136.16 gi|407464943|ref|YP_006775825.1| - 2.3e-86 290.4 7.2 3.5e-86 289.8 5.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.14 gi|407464943|ref|YP_006775825.1| - 2.9e-46 157.8 3.6 4.7e-46 157.1 2.5 1.4 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.1 gi|407464943|ref|YP_006775825.1| - 2.4e-07 30.6 0.9 6.8e-07 29.2 0.6 1.7 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.4 gi|407464943|ref|YP_006775825.1| - 9.1e-06 25.3 1.8 4.3e-05 23.1 1.2 2.1 1 1 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB MtN3_slv PF03083.11 gi|407464944|ref|YP_006775826.1| - 3.5e-09 36.4 4.1 4e-09 36.2 2.8 1.1 1 0 0 1 1 1 1 Sugar efflux transporter for intercellular exchange PQ-loop PF04193.9 gi|407464944|ref|YP_006775826.1| - 9.2e-05 21.9 3.1 0.00015 21.2 2.1 1.4 1 0 0 1 1 1 1 PQ loop repeat Bax1-I PF01027.15 gi|407464944|ref|YP_006775826.1| - 0.0026 17.4 4.2 0.0031 17.1 2.9 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 LAB_N PF07578.6 gi|407464944|ref|YP_006775826.1| - 0.062 13.2 2.6 0.079 12.8 1.8 1.2 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain Zip PF02535.17 gi|407464944|ref|YP_006775826.1| - 0.26 10.2 1.7 0.19 10.7 0.2 1.4 2 0 0 2 2 2 0 ZIP Zinc transporter DUF1282 PF06930.7 gi|407464944|ref|YP_006775826.1| - 0.45 10.1 4.8 0.57 9.8 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1282) DUF3784 PF12650.2 gi|407464944|ref|YP_006775826.1| - 2.7 7.9 11.4 25 4.8 7.9 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3784) DUF3955 PF13127.1 gi|407464944|ref|YP_006775826.1| - 4.4 6.9 9.4 0.72 9.4 1.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF3955) TIM PF00121.13 gi|407464945|ref|YP_006775827.1| - 4.6e-29 101.1 5.5 9.3e-19 67.4 0.4 2.0 1 1 1 2 2 2 2 Triosephosphate isomerase ThiG PF05690.9 gi|407464945|ref|YP_006775827.1| - 0.00012 21.2 0.2 0.00019 20.5 0.2 1.4 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG IGPS PF00218.16 gi|407464945|ref|YP_006775827.1| - 0.0015 17.6 0.0 0.0025 16.9 0.0 1.4 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase FMN_dh PF01070.13 gi|407464945|ref|YP_006775827.1| - 0.0051 15.7 0.2 0.0083 15.0 0.1 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase His_biosynth PF00977.16 gi|407464945|ref|YP_006775827.1| - 0.034 13.4 1.1 0.043 13.0 0.2 1.6 2 0 0 2 2 2 0 Histidine biosynthesis protein TFIIE_alpha PF02002.12 gi|407464945|ref|YP_006775827.1| - 0.046 13.2 0.3 0.046 13.2 0.2 1.9 2 1 0 2 2 2 0 TFIIE alpha subunit NMO PF03060.10 gi|407464945|ref|YP_006775827.1| - 0.052 12.6 0.0 0.065 12.3 0.0 1.3 1 1 0 1 1 1 0 Nitronate monooxygenase PcrB PF01884.12 gi|407464945|ref|YP_006775827.1| - 0.069 12.3 3.7 0.052 12.8 0.7 2.0 2 1 1 3 3 3 0 PcrB family PEP-utilizers_C PF02896.13 gi|407464946|ref|YP_006775828.1| - 7.1e-92 307.4 1.0 1e-91 306.8 0.3 1.6 2 0 0 2 2 2 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.14 gi|407464946|ref|YP_006775828.1| - 5.1e-59 199.9 0.0 1.8e-58 198.1 0.0 1.8 1 1 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.18 gi|407464946|ref|YP_006775828.1| - 6.5e-24 83.3 0.2 2e-23 81.7 0.1 1.9 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Phage_connect_1 PF05135.8 gi|407464946|ref|YP_006775828.1| - 0.0025 17.9 1.1 0.011 15.9 0.1 2.6 3 0 0 3 3 3 1 Phage gp6-like head-tail connector protein SUKH_6 PF14568.1 gi|407464946|ref|YP_006775828.1| - 0.025 15.0 0.2 3.1 8.3 0.0 2.7 2 0 0 2 2 2 0 SMI1-KNR4 cell-wall HTH_3 PF01381.17 gi|407464947|ref|YP_006775829.1| - 4.4e-15 55.2 0.6 8.2e-15 54.3 0.4 1.4 1 0 0 1 1 1 1 Helix-turn-helix CBS PF00571.23 gi|407464947|ref|YP_006775829.1| - 2.7e-13 49.4 0.4 6.8e-10 38.5 0.0 2.3 2 0 0 2 2 2 2 CBS domain HTH_19 PF12844.2 gi|407464947|ref|YP_006775829.1| - 3.1e-10 39.9 0.3 6.8e-10 38.8 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|407464947|ref|YP_006775829.1| - 1.4e-07 31.5 0.0 2.4e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|407464947|ref|YP_006775829.1| - 0.0047 17.0 0.2 0.0093 16.1 0.1 1.5 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.1 gi|407464947|ref|YP_006775829.1| - 0.0069 15.9 0.0 0.012 15.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.1 gi|407464947|ref|YP_006775829.1| - 0.0077 16.0 0.3 0.022 14.5 0.2 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.11 gi|407464947|ref|YP_006775829.1| - 0.051 12.9 0.1 0.11 11.8 0.1 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_24 PF13412.1 gi|407464947|ref|YP_006775829.1| - 0.071 12.5 0.1 0.18 11.1 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 gi|407464947|ref|YP_006775829.1| - 0.1 12.2 0.1 1.8 8.2 0.1 2.5 2 0 0 2 2 2 0 HTH domain HTH_Crp_2 PF13545.1 gi|407464947|ref|YP_006775829.1| - 0.11 12.2 0.0 0.29 10.9 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain FBPase_2 PF06874.6 gi|407464948|ref|YP_006775830.1| - 0.031 12.3 0.0 0.031 12.3 0.0 1.1 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase Anoctamin PF04547.7 gi|407464948|ref|YP_006775830.1| - 0.088 11.4 0.1 0.099 11.2 0.1 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel Glyoxalase_4 PF13669.1 gi|407464949|ref|YP_006775831.1| - 2.1e-22 79.1 0.0 2.5e-22 78.9 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.20 gi|407464949|ref|YP_006775831.1| - 4.8e-14 52.4 0.0 5.1e-14 52.3 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.1 gi|407464949|ref|YP_006775831.1| - 9.9e-11 41.8 0.0 1.1e-10 41.7 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.2 gi|407464949|ref|YP_006775831.1| - 3.3e-07 30.8 0.0 3.6e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Usp PF00582.21 gi|407464950|ref|YP_006775832.1| - 8e-18 64.9 0.0 8.9e-18 64.8 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family KdgM PF06178.8 gi|407464950|ref|YP_006775832.1| - 0.0045 16.5 0.1 0.0052 16.3 0.0 1.0 1 0 0 1 1 1 1 Oligogalacturonate-specific porin protein (KdgM) Pterin_bind PF00809.17 gi|407464950|ref|YP_006775832.1| - 0.094 12.0 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Pterin binding enzyme Usp PF00582.21 gi|407464951|ref|YP_006775833.1| - 1e-27 97.0 0.3 1.1e-27 96.8 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF2099 PF09872.4 gi|407464951|ref|YP_006775833.1| - 0.011 14.7 0.4 0.017 14.2 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2099) DUF3103 PF11301.3 gi|407464951|ref|YP_006775833.1| - 0.042 12.5 0.1 0.054 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3103) DUF2357 PF09823.4 gi|407464951|ref|YP_006775833.1| - 0.071 12.1 0.2 0.082 11.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2357) DUF45 PF01863.12 gi|407464952|ref|YP_006775834.1| - 0.0026 17.6 0.8 0.003 17.3 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF45 SprT-like PF10263.4 gi|407464952|ref|YP_006775834.1| - 0.011 15.4 0.2 0.018 14.6 0.1 1.5 1 1 0 1 1 1 0 SprT-like family Aspzincin_M35 PF14521.1 gi|407464952|ref|YP_006775834.1| - 0.06 13.8 0.1 0.076 13.5 0.1 1.3 1 0 0 1 1 1 0 Lysine-specific metallo-endopeptidase Methyltransf_31 PF13847.1 gi|407464953|ref|YP_006775835.1| - 7.2e-05 22.4 0.8 0.0013 18.3 0.7 2.4 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407464953|ref|YP_006775835.1| - 0.0011 18.7 0.0 0.0021 17.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407464953|ref|YP_006775835.1| - 0.0064 16.9 0.1 0.043 14.2 0.0 2.2 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|407464953|ref|YP_006775835.1| - 0.079 13.3 0.0 0.21 11.9 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain MM_CoA_mutase PF01642.17 gi|407464954|ref|YP_006775836.1| - 4.7e-189 628.8 0.2 5.6e-189 628.5 0.1 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase PAP_PilO PF06864.7 gi|407464954|ref|YP_006775836.1| - 0.0017 16.8 0.0 0.0066 14.8 0.0 1.8 2 0 0 2 2 2 1 Pilin accessory protein (PilO) DUF2136 PF09907.4 gi|407464954|ref|YP_006775836.1| - 0.063 13.3 0.0 0.19 11.8 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2136) ArgK PF03308.11 gi|407464955|ref|YP_006775837.1| - 1.6e-74 250.0 4.8 2e-74 249.7 3.3 1.1 1 0 0 1 1 1 1 ArgK protein cobW PF02492.14 gi|407464955|ref|YP_006775837.1| - 3.7e-07 29.7 0.5 1.3e-06 27.9 0.1 2.1 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.12 gi|407464955|ref|YP_006775837.1| - 4.3e-06 26.4 0.2 0.0063 16.0 0.1 2.4 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein KAP_NTPase PF07693.9 gi|407464955|ref|YP_006775837.1| - 0.00016 20.7 0.0 0.00033 19.7 0.0 1.5 1 1 0 1 1 1 1 KAP family P-loop domain AAA_10 PF12846.2 gi|407464955|ref|YP_006775837.1| - 0.00093 18.7 0.2 0.0015 18.0 0.2 1.6 1 1 0 1 1 1 1 AAA-like domain NB-ARC PF00931.17 gi|407464955|ref|YP_006775837.1| - 0.0012 17.7 1.9 0.0055 15.6 0.1 2.0 2 0 0 2 2 2 1 NB-ARC domain AAA_16 PF13191.1 gi|407464955|ref|YP_006775837.1| - 0.0013 18.7 0.0 0.002 18.1 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain DUF258 PF03193.11 gi|407464955|ref|YP_006775837.1| - 0.0024 17.0 0.1 0.0053 15.9 0.1 1.7 1 0 0 1 1 1 1 Protein of unknown function, DUF258 MobB PF03205.9 gi|407464955|ref|YP_006775837.1| - 0.005 16.5 1.7 0.021 14.5 0.1 2.6 3 0 0 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.1 gi|407464955|ref|YP_006775837.1| - 0.0059 16.2 0.2 0.012 15.1 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|407464955|ref|YP_006775837.1| - 0.0066 16.8 9.4 0.17 12.2 1.0 2.3 2 1 0 2 2 2 2 AAA domain ABC_tran PF00005.22 gi|407464955|ref|YP_006775837.1| - 0.0095 16.2 1.0 0.034 14.4 0.1 2.2 2 0 0 2 2 2 1 ABC transporter Arch_ATPase PF01637.13 gi|407464955|ref|YP_006775837.1| - 0.021 14.5 2.2 0.17 11.5 0.0 2.2 2 0 0 2 2 2 0 Archaeal ATPase PRK PF00485.13 gi|407464955|ref|YP_006775837.1| - 0.026 14.0 1.8 0.037 13.5 0.2 2.0 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Ubiq_cyt_C_chap PF03981.7 gi|407464955|ref|YP_006775837.1| - 0.027 14.3 0.3 0.059 13.2 0.2 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone MMR_HSR1 PF01926.18 gi|407464955|ref|YP_006775837.1| - 0.041 13.8 2.1 0.11 12.3 1.5 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.1 gi|407464955|ref|YP_006775837.1| - 0.046 13.8 0.4 0.53 10.4 0.1 2.7 1 1 3 4 4 4 0 AAA domain AAA_29 PF13555.1 gi|407464955|ref|YP_006775837.1| - 0.062 12.8 0.2 0.14 11.7 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_17 PF13207.1 gi|407464955|ref|YP_006775837.1| - 0.062 14.1 2.8 0.093 13.5 0.5 2.1 2 0 0 2 2 2 0 AAA domain Miro PF08477.8 gi|407464955|ref|YP_006775837.1| - 0.065 13.7 0.9 0.45 11.0 0.1 2.6 2 1 0 2 2 2 0 Miro-like protein Zeta_toxin PF06414.7 gi|407464955|ref|YP_006775837.1| - 0.09 11.8 0.2 0.2 10.7 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_18 PF13238.1 gi|407464955|ref|YP_006775837.1| - 0.13 12.5 2.7 0.59 10.4 0.1 2.4 2 0 0 2 2 2 0 AAA domain Tub_2 PF04525.7 gi|407464957|ref|YP_006775839.1| - 0.06 12.7 0.7 0.19 11.1 0.5 1.8 1 1 1 2 2 2 0 Tubby C 2 DUF3185 PF11381.3 gi|407464958|ref|YP_006775840.1| - 0.0059 16.3 4.2 0.37 10.5 2.3 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3185) DUF3784 PF12650.2 gi|407464958|ref|YP_006775840.1| - 0.022 14.6 0.8 0.029 14.2 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) DUF872 PF05915.7 gi|407464958|ref|YP_006775840.1| - 0.025 14.4 4.6 0.078 12.8 3.1 1.7 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF202 PF02656.10 gi|407464958|ref|YP_006775840.1| - 0.13 12.4 1.1 0.18 12.0 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF202) Nucleos_tra2_C PF07662.8 gi|407464958|ref|YP_006775840.1| - 0.18 11.2 1.9 0.22 10.9 1.3 1.1 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus FtsH_ext PF06480.10 gi|407464958|ref|YP_006775840.1| - 0.26 11.4 1.3 0.28 11.3 0.4 1.4 1 1 0 1 1 1 0 FtsH Extracellular Tetraspannin PF00335.15 gi|407464958|ref|YP_006775840.1| - 0.39 9.9 1.9 0.48 9.6 1.3 1.0 1 0 0 1 1 1 0 Tetraspanin family SdpI PF13630.1 gi|407464958|ref|YP_006775840.1| - 1.2 8.8 3.5 1.9 8.2 2.4 1.3 1 1 0 1 1 1 0 SdpI/YhfL protein family DUF4282 PF14110.1 gi|407464958|ref|YP_006775840.1| - 2.4 8.4 5.5 3 8.0 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) DUF3096 PF11295.3 gi|407464958|ref|YP_006775840.1| - 3.7 7.1 10.7 3.4 7.2 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3096) Peptidase_M1 PF01433.15 gi|407464960|ref|YP_006775842.1| - 7.9e-140 466.3 0.7 1e-139 465.9 0.5 1.1 1 0 0 1 1 1 1 Peptidase family M1 ERAP1_C PF11838.3 gi|407464960|ref|YP_006775842.1| - 2.7e-58 197.7 0.6 3.7e-58 197.2 0.0 1.5 2 0 0 2 2 2 1 ERAP1-like C-terminal domain Peptidase_MA_2 PF13485.1 gi|407464960|ref|YP_006775842.1| - 4.1e-19 68.8 0.0 9.6e-19 67.6 0.0 1.6 1 0 0 1 1 1 1 Peptidase MA superfamily DUF2265 PF10023.4 gi|407464960|ref|YP_006775842.1| - 0.055 12.6 0.1 0.12 11.5 0.1 1.5 1 0 0 1 1 1 0 Predicted aminopeptidase (DUF2265) DUF3216 PF11505.3 gi|407464961|ref|YP_006775843.1| - 0.0077 16.0 0.1 0.014 15.1 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3216) HTH_20 PF12840.2 gi|407464962|ref|YP_006775844.1| - 0.00036 20.2 0.0 0.00051 19.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DDRGK PF09756.4 gi|407464962|ref|YP_006775844.1| - 0.0031 16.9 0.2 0.0032 16.9 0.2 1.1 1 0 0 1 1 1 1 DDRGK domain HTH_IclR PF09339.5 gi|407464962|ref|YP_006775844.1| - 0.0035 16.8 0.0 0.0052 16.3 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain FUR PF01475.14 gi|407464962|ref|YP_006775844.1| - 0.012 15.5 0.1 0.013 15.3 0.0 1.3 1 1 0 1 1 1 0 Ferric uptake regulator family TrmB PF01978.14 gi|407464962|ref|YP_006775844.1| - 0.029 14.0 0.1 0.044 13.4 0.1 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB UPF0158 PF03682.8 gi|407464962|ref|YP_006775844.1| - 0.087 12.4 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) TFIIB PF00382.14 gi|407464963|ref|YP_006775845.1| - 1.7e-33 114.2 6.3 2.1e-18 65.8 0.5 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|407464963|ref|YP_006775845.1| - 5.3e-11 41.6 1.4 8.4e-11 41.0 1.0 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.18 gi|407464963|ref|YP_006775845.1| - 2.2e-05 23.9 0.6 0.0041 16.6 0.1 2.1 1 1 0 2 2 2 1 Cyclin, N-terminal domain zf-ribbon_3 PF13248.1 gi|407464963|ref|YP_006775845.1| - 0.00024 20.1 2.1 0.00041 19.4 1.4 1.4 1 0 0 1 1 1 1 zinc-ribbon domain HTH_AsnC-type PF13404.1 gi|407464963|ref|YP_006775845.1| - 0.001 18.5 0.3 0.0091 15.5 0.0 2.5 3 0 0 3 3 2 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.7 gi|407464963|ref|YP_006775845.1| - 0.0016 18.0 0.9 0.058 13.0 0.0 2.6 2 0 0 2 2 2 1 HTH domain zinc_ribbon_2 PF13240.1 gi|407464963|ref|YP_006775845.1| - 0.0057 16.1 2.5 0.43 10.1 0.3 2.4 2 0 0 2 2 2 1 zinc-ribbon domain HTH_3 PF01381.17 gi|407464963|ref|YP_006775845.1| - 0.011 15.6 0.1 0.1 12.4 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix HTH_Crp_2 PF13545.1 gi|407464963|ref|YP_006775845.1| - 0.012 15.3 0.1 0.48 10.2 0.0 2.4 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.11 gi|407464963|ref|YP_006775845.1| - 0.033 13.5 0.0 3.6 6.9 0.0 2.7 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_31 PF13560.1 gi|407464963|ref|YP_006775845.1| - 0.05 13.8 0.2 0.92 9.7 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|407464963|ref|YP_006775845.1| - 0.055 12.8 0.4 0.32 10.4 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Ribosomal_S27 PF01599.14 gi|407464963|ref|YP_006775845.1| - 0.056 13.2 0.5 0.12 12.1 0.4 1.6 1 0 0 1 1 1 0 Ribosomal protein S27a A2L_zn_ribbon PF08792.5 gi|407464963|ref|YP_006775845.1| - 0.084 12.3 1.3 0.16 11.4 0.9 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Rrf2 PF02082.15 gi|407464963|ref|YP_006775845.1| - 0.099 12.7 1.5 17 5.6 0.0 3.5 3 1 1 4 4 4 0 Transcriptional regulator Ribosomal_L37e PF01907.14 gi|407464963|ref|YP_006775845.1| - 0.11 12.3 0.2 0.25 11.1 0.1 1.6 1 0 0 1 1 1 0 Ribosomal protein L37e LacI PF00356.16 gi|407464963|ref|YP_006775845.1| - 0.11 12.0 4.9 4.1 7.1 0.2 3.3 3 0 0 3 3 3 0 Bacterial regulatory proteins, lacI family GntR PF00392.16 gi|407464963|ref|YP_006775845.1| - 0.13 11.6 0.5 0.62 9.5 0.0 2.4 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family zf-NADH-PPase PF09297.6 gi|407464963|ref|YP_006775845.1| - 0.33 10.4 1.7 3.6 7.1 0.1 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DnaJ_CXXCXGXG PF00684.14 gi|407464964|ref|YP_006775846.1| - 0.02 14.9 9.7 0.075 13.0 6.8 1.9 1 1 0 1 1 1 0 DnaJ central domain ApbA PF02558.11 gi|407464964|ref|YP_006775846.1| - 0.039 13.4 0.0 0.041 13.3 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA A2L_zn_ribbon PF08792.5 gi|407464964|ref|YP_006775846.1| - 0.18 11.3 0.2 0.18 11.3 0.1 3.4 3 1 0 3 3 3 0 A2L zinc ribbon domain Antifungal_prot PF11402.3 gi|407464964|ref|YP_006775846.1| - 0.29 11.3 10.6 2.7 8.2 7.3 2.1 1 1 0 1 1 1 0 Antifungal protein Ribosomal_L33 PF00471.15 gi|407464964|ref|YP_006775846.1| - 0.54 10.5 4.0 1 9.6 2.4 1.8 1 1 0 1 1 1 0 Ribosomal protein L33 zf-nanos PF05741.8 gi|407464964|ref|YP_006775846.1| - 1.3 9.0 12.0 1.5 8.8 5.3 2.3 2 1 0 2 2 2 0 Nanos RNA binding domain DUF2256 PF10013.4 gi|407464964|ref|YP_006775846.1| - 7.2 6.4 6.9 8 6.3 0.7 2.7 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) DZR PF12773.2 gi|407464964|ref|YP_006775846.1| - 7.3 6.4 12.4 3.5 7.5 1.3 2.5 2 1 1 3 3 3 0 Double zinc ribbon B12-binding PF02310.14 gi|407464965|ref|YP_006775847.1| - 6.2e-20 71.2 0.2 8e-20 70.9 0.1 1.1 1 0 0 1 1 1 1 B12 binding domain IMPDH PF00478.20 gi|407464965|ref|YP_006775847.1| - 0.053 12.3 0.1 0.056 12.3 0.1 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain PcrB PF01884.12 gi|407464965|ref|YP_006775847.1| - 0.065 12.4 1.4 0.15 11.2 0.1 1.8 1 1 1 2 2 2 0 PcrB family His_biosynth PF00977.16 gi|407464965|ref|YP_006775847.1| - 0.12 11.6 0.5 1.6 7.9 0.1 1.9 1 1 1 2 2 2 0 Histidine biosynthesis protein RibD_C PF01872.12 gi|407464965|ref|YP_006775847.1| - 0.13 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 RibD C-terminal domain IlvN PF07991.7 gi|407464966|ref|YP_006775848.1| - 5.5e-66 220.9 0.4 8.1e-66 220.4 0.3 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain IlvC PF01450.14 gi|407464966|ref|YP_006775848.1| - 5.2e-48 162.6 0.2 7.9e-48 162.0 0.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.14 gi|407464966|ref|YP_006775848.1| - 2.4e-06 26.8 0.1 4.4e-06 25.9 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 gi|407464966|ref|YP_006775848.1| - 0.00011 22.1 0.3 0.00072 19.4 0.1 2.2 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|407464966|ref|YP_006775848.1| - 0.00063 20.1 0.2 0.0012 19.1 0.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.16 gi|407464966|ref|YP_006775848.1| - 0.0054 16.6 0.2 0.01 15.7 0.1 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NTP_transf_2 PF01909.18 gi|407464967|ref|YP_006775849.1| - 1.9e-07 31.2 0.1 4.7e-07 30.0 0.0 1.7 1 1 0 1 1 1 1 Nucleotidyltransferase domain SNase PF00565.12 gi|407464968|ref|YP_006775850.1| - 3.6e-07 30.4 0.0 5.9e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Staphylococcal nuclease homologue Frag1 PF10277.4 gi|407464968|ref|YP_006775850.1| - 0.14 11.5 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family GTP_EFTU_D2 PF03144.20 gi|407464969|ref|YP_006775851.1| - 1.8e-09 37.6 0.4 5.5e-09 36.0 0.3 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.1 gi|407464969|ref|YP_006775851.1| - 0.0047 16.5 0.3 0.0047 16.5 0.2 2.2 3 0 0 3 3 3 1 Elongation factor Tu domain 4 DUF726 PF05277.7 gi|407464970|ref|YP_006775852.1| - 2.7e-11 42.9 0.0 3.8e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF726) DUF900 PF05990.7 gi|407464970|ref|YP_006775852.1| - 9.4e-10 38.2 0.0 1.3e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) LCAT PF02450.10 gi|407464970|ref|YP_006775852.1| - 3.3e-05 23.0 0.1 4.9e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase Cutinase PF01083.17 gi|407464970|ref|YP_006775852.1| - 0.0001 22.1 0.0 0.00015 21.5 0.0 1.3 1 0 0 1 1 1 1 Cutinase DUF2305 PF10230.4 gi|407464970|ref|YP_006775852.1| - 0.00037 19.9 0.2 0.00059 19.3 0.1 1.3 1 1 0 1 1 1 1 Uncharacterised conserved protein (DUF2305) DUF676 PF05057.9 gi|407464970|ref|YP_006775852.1| - 0.00041 19.7 0.3 0.0013 18.0 0.2 1.9 1 1 0 1 1 1 1 Putative serine esterase (DUF676) Abhydrolase_5 PF12695.2 gi|407464970|ref|YP_006775852.1| - 0.0014 18.3 0.0 0.0017 18.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF1749 PF08538.5 gi|407464970|ref|YP_006775852.1| - 0.0015 17.4 0.0 0.0024 16.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1749) Lipase_3 PF01764.20 gi|407464970|ref|YP_006775852.1| - 0.0021 17.6 0.0 0.0025 17.4 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_8 PF06259.7 gi|407464970|ref|YP_006775852.1| - 0.0085 15.6 0.0 0.016 14.6 0.0 1.6 1 1 0 1 1 1 1 Alpha/beta hydrolase PGAP1 PF07819.8 gi|407464970|ref|YP_006775852.1| - 0.062 12.8 0.1 0.088 12.3 0.1 1.3 1 0 0 1 1 1 0 PGAP1-like protein tRNA-synt_1g PF09334.6 gi|407464971|ref|YP_006775853.1| - 3.5e-135 450.6 0.5 4.4e-135 450.3 0.4 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.17 gi|407464971|ref|YP_006775853.1| - 5.3e-19 67.6 0.6 7.3e-07 27.5 0.0 4.1 2 2 1 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.14 gi|407464971|ref|YP_006775853.1| - 4.1e-13 49.1 0.3 9.6e-07 28.2 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.8 gi|407464971|ref|YP_006775853.1| - 4.8e-09 36.1 0.0 8.6e-09 35.3 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.13 gi|407464971|ref|YP_006775853.1| - 2.5e-05 23.1 0.1 0.0009 18.0 0.0 2.8 3 0 0 3 3 3 1 tRNA synthetases class I (K) tRNA-synt_1d PF00750.14 gi|407464971|ref|YP_006775853.1| - 0.012 14.4 0.1 0.52 9.0 0.0 2.3 1 1 1 2 2 2 0 tRNA synthetases class I (R) FhuF PF06276.7 gi|407464971|ref|YP_006775853.1| - 0.14 12.1 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Ferric iron reductase FhuF-like transporter zf-ribbon_3 PF13248.1 gi|407464971|ref|YP_006775853.1| - 0.34 10.1 6.7 11 5.3 4.7 2.4 1 1 0 1 1 1 0 zinc-ribbon domain DZR PF12773.2 gi|407464971|ref|YP_006775853.1| - 0.65 9.8 7.3 0.81 9.5 4.3 1.6 1 1 1 2 2 2 0 Double zinc ribbon AdoHcyase_NAD PF00670.16 gi|407464972|ref|YP_006775854.1| - 1.3e-51 174.6 1.8 1.3e-51 174.6 1.2 2.5 3 0 0 3 3 3 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AdoHcyase PF05221.12 gi|407464972|ref|YP_006775854.1| - 9.9e-50 168.9 0.4 1.2e-49 168.6 0.3 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase 2-Hacid_dh_C PF02826.14 gi|407464972|ref|YP_006775854.1| - 5.6e-10 38.6 0.8 1.1e-09 37.6 0.2 1.7 1 1 1 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.7 gi|407464972|ref|YP_006775854.1| - 6.4e-07 28.8 0.2 1.4e-06 27.8 0.2 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain TrkA_N PF02254.13 gi|407464972|ref|YP_006775854.1| - 0.0018 18.2 0.1 0.006 16.5 0.0 1.9 2 0 0 2 2 2 1 TrkA-N domain Shikimate_DH PF01488.15 gi|407464972|ref|YP_006775854.1| - 0.0043 17.1 0.6 0.043 13.9 0.1 2.4 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.12 gi|407464972|ref|YP_006775854.1| - 0.014 15.8 0.1 0.034 14.5 0.0 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.13 gi|407464972|ref|YP_006775854.1| - 0.036 13.7 0.5 0.036 13.7 0.4 2.5 3 1 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF364 PF04016.7 gi|407464972|ref|YP_006775854.1| - 0.047 13.0 0.1 0.13 11.5 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF364) Rieske PF00355.21 gi|407464973|ref|YP_006775855.1| - 3.5e-14 52.1 0.0 3.8e-14 52.0 0.0 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 gi|407464973|ref|YP_006775855.1| - 1.3e-12 47.3 0.0 1.5e-12 47.1 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain ABC2_membrane_3 PF12698.2 gi|407464974|ref|YP_006775856.1| - 0.035 13.1 1.3 0.044 12.8 0.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Thioredoxin_8 PF13905.1 gi|407464974|ref|YP_006775856.1| - 0.12 12.4 0.0 0.19 11.8 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin-like NAD_synthase PF02540.12 gi|407464975|ref|YP_006775857.1| - 1.2e-78 263.3 0.7 1.4e-78 263.1 0.5 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|407464975|ref|YP_006775857.1| - 0.00033 19.3 0.0 0.012 14.1 0.0 2.2 2 0 0 2 2 2 1 tRNA methyl transferase Asn_synthase PF00733.16 gi|407464975|ref|YP_006775857.1| - 0.0027 17.2 0.0 0.0041 16.6 0.0 1.4 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|407464975|ref|YP_006775857.1| - 0.0064 15.7 0.0 0.05 12.8 0.0 2.1 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.15 gi|407464975|ref|YP_006775857.1| - 0.01 15.3 0.0 0.017 14.5 0.0 1.4 1 0 0 1 1 1 0 PP-loop family ThiI PF02568.9 gi|407464975|ref|YP_006775857.1| - 0.018 14.4 0.0 0.41 10.0 0.0 2.4 2 0 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) HTH_25 PF13413.1 gi|407464975|ref|YP_006775857.1| - 0.043 13.4 0.3 2.7 7.7 0.1 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain Phage_terminase PF10668.4 gi|407464975|ref|YP_006775857.1| - 0.073 12.8 0.1 0.38 10.5 0.0 2.2 2 0 0 2 2 2 0 Phage terminase small subunit IF2_N PF04760.10 gi|407464975|ref|YP_006775857.1| - 0.15 11.7 2.2 3.6 7.3 0.1 2.7 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region Latrotoxin_C PF15658.1 gi|407464975|ref|YP_006775857.1| - 0.16 11.7 2.7 1.3 8.8 0.2 2.4 2 0 0 2 2 2 0 Latrotoxin C-terminal domain Orthopox_B11R PF07033.6 gi|407464975|ref|YP_006775857.1| - 0.25 10.8 7.2 1.1 8.8 0.1 2.8 3 0 0 3 3 3 0 Orthopoxvirus B11R protein Ribosomal_S13 PF00416.17 gi|407464975|ref|YP_006775857.1| - 1 9.8 3.2 9.1 6.7 0.1 2.7 2 1 0 2 2 2 0 Ribosomal protein S13/S18 tRNA-synt_1e PF01406.14 gi|407464976|ref|YP_006775858.1| - 3.5e-126 420.3 1.3 3.5e-126 420.3 0.9 1.9 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.6 gi|407464976|ref|YP_006775858.1| - 1.2e-14 53.8 0.8 2.4e-08 33.0 0.2 2.5 2 1 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.6 gi|407464976|ref|YP_006775858.1| - 1.2e-12 47.9 0.6 1.2e-12 47.9 0.4 1.9 2 0 0 2 2 2 1 DALR domain tRNA-synt_1 PF00133.17 gi|407464976|ref|YP_006775858.1| - 1.5e-08 33.1 0.0 7.9e-07 27.4 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.13 gi|407464976|ref|YP_006775858.1| - 3.2e-06 26.0 1.5 0.019 13.6 0.0 2.6 3 0 0 3 3 3 2 tRNA synthetases class I (K) YolD PF08863.5 gi|407464976|ref|YP_006775858.1| - 0.001 18.8 1.7 0.005 16.6 1.2 2.3 1 0 0 1 1 1 1 YolD-like protein Reprolysin_4 PF13583.1 gi|407464976|ref|YP_006775858.1| - 0.049 13.1 0.1 0.091 12.2 0.1 1.5 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like ERp29 PF07749.7 gi|407464976|ref|YP_006775858.1| - 0.23 12.0 8.2 14 6.4 0.5 3.9 2 2 1 3 3 3 0 Endoplasmic reticulum protein ERp29, C-terminal domain Band_7 PF01145.20 gi|407464976|ref|YP_006775858.1| - 2.3 8.0 8.1 11 5.8 2.6 2.5 2 1 0 2 2 2 0 SPFH domain / Band 7 family Flp_Fap PF04964.9 gi|407464977|ref|YP_006775859.1| - 6.9 6.3 6.3 0.61 9.7 0.3 2.1 3 0 0 3 3 3 0 Flp/Fap pilin component Pyr_excise PF03013.9 gi|407464978|ref|YP_006775860.1| - 2e-12 47.0 0.4 3.5e-12 46.2 0.3 1.3 1 1 0 1 1 1 1 Pyrimidine dimer DNA glycosylase Pyridox_oxidase PF01243.15 gi|407464979|ref|YP_006775861.1| - 2.8e-05 24.0 0.0 4e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|407464979|ref|YP_006775861.1| - 0.0007 19.4 0.0 0.001 18.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HTH_5 PF01022.15 gi|407464979|ref|YP_006775861.1| - 0.14 11.8 0.0 2.4 7.9 0.0 2.5 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family MS_channel PF00924.13 gi|407464982|ref|YP_006775864.1| - 4.4e-48 163.3 2.1 6e-48 162.9 1.5 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF432 PF04254.8 gi|407464983|ref|YP_006775865.1| - 3.1e-31 107.8 0.0 6.3e-31 106.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF432) YycH PF07435.6 gi|407464983|ref|YP_006775865.1| - 0.055 12.1 0.6 0.2 10.3 0.2 1.8 2 0 0 2 2 2 0 YycH protein EF-hand_1 PF00036.27 gi|407464984|ref|YP_006775866.1| - 0.09 12.1 1.9 5 6.6 0.0 3.0 3 0 0 3 3 3 0 EF hand DUF1722 PF08349.6 gi|407464985|ref|YP_006775867.1| - 1.1e-33 115.6 3.6 1.6e-33 115.0 2.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) DUF2974 PF11187.3 gi|407464985|ref|YP_006775867.1| - 0.012 14.9 2.3 0.016 14.5 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) DUF577 PF04510.7 gi|407464985|ref|YP_006775867.1| - 0.023 14.3 4.2 0.045 13.4 2.4 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF577) RDM PF11002.3 gi|407464985|ref|YP_006775867.1| - 0.098 12.3 0.1 0.93 9.2 0.0 2.3 2 0 0 2 2 2 0 RFPL defining motif (RDM) Peptidase_C6 PF00851.13 gi|407464985|ref|YP_006775867.1| - 0.5 8.9 6.7 0.6 8.6 4.7 1.1 1 0 0 1 1 1 0 Helper component proteinase DUF650 PF04894.7 gi|407464986|ref|YP_006775868.1| - 1.8e-86 290.0 0.0 2.2e-86 289.7 0.0 1.1 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF650) DUF651 PF04895.7 gi|407464986|ref|YP_006775868.1| - 1.8e-35 120.8 0.0 2.9e-35 120.2 0.0 1.3 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF651) HTH_7 PF02796.10 gi|407464986|ref|YP_006775868.1| - 0.097 12.5 0.0 0.24 11.2 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Peripla_BP_2 PF01497.13 gi|407464987|ref|YP_006775869.1| - 4.6e-45 153.6 0.0 5.4e-45 153.3 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Methyltransf_31 PF13847.1 gi|407464987|ref|YP_006775869.1| - 0.0041 16.7 1.5 0.0083 15.7 1.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ribosomal_L17 PF01196.14 gi|407464987|ref|YP_006775869.1| - 0.57 10.7 4.7 0.33 11.5 1.5 2.1 2 1 0 2 2 2 0 Ribosomal protein L17 NAD_binding_10 PF13460.1 gi|407464988|ref|YP_006775870.1| - 3.3e-18 66.3 0.0 4.3e-18 65.9 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding 3Beta_HSD PF01073.14 gi|407464988|ref|YP_006775870.1| - 2.6e-10 39.4 0.0 5.1e-10 38.5 0.0 1.4 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.16 gi|407464988|ref|YP_006775870.1| - 5.6e-10 39.0 0.1 1.1e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.8 gi|407464988|ref|YP_006775870.1| - 1.1e-09 37.8 0.0 1.6e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.12 gi|407464988|ref|YP_006775870.1| - 0.00061 18.7 0.0 0.0017 17.3 0.0 1.7 2 0 0 2 2 2 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|407464988|ref|YP_006775870.1| - 0.028 13.3 0.1 0.089 11.7 0.0 1.8 2 0 0 2 2 2 0 Male sterility protein Transposase_28 PF04195.7 gi|407464988|ref|YP_006775870.1| - 0.088 12.1 0.2 0.17 11.1 0.1 1.5 1 0 0 1 1 1 0 Putative gypsy type transposon Phage_CI_repr PF07022.8 gi|407464989|ref|YP_006775871.1| - 0.1 12.7 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain B12-binding PF02310.14 gi|407464990|ref|YP_006775872.1| - 1.2e-12 47.7 0.0 2e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|407464990|ref|YP_006775872.1| - 2.2e-12 46.8 0.0 3.4e-12 46.2 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain Tautomerase_2 PF14552.1 gi|407464990|ref|YP_006775872.1| - 0.04 13.9 1.0 1.8 8.6 0.1 3.2 3 0 0 3 3 3 0 Tautomerase enzyme DNA_pol3_delta PF06144.8 gi|407464990|ref|YP_006775872.1| - 0.042 13.3 1.0 1.4 8.3 0.0 2.5 2 1 0 2 2 2 0 DNA polymerase III, delta subunit P22_AR_N PF10547.4 gi|407464990|ref|YP_006775872.1| - 0.063 13.1 0.1 0.17 11.6 0.1 1.7 1 0 0 1 1 1 0 P22_AR N-terminal domain NLBH PF05211.7 gi|407464991|ref|YP_006775873.1| - 0.044 13.0 1.1 1.3 8.1 0.1 2.0 1 1 1 2 2 2 0 Neuraminyllactose-binding hemagglutinin precursor (NLBH) TFIIB PF00382.14 gi|407464992|ref|YP_006775874.1| - 7.2e-25 86.6 5.6 8.2e-15 54.3 0.0 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat Cyclin_C PF02984.14 gi|407464992|ref|YP_006775874.1| - 2.5e-06 27.4 0.0 5.2e-05 23.1 0.0 2.2 2 0 0 2 2 2 1 Cyclin, C-terminal domain TF_Zn_Ribbon PF08271.7 gi|407464992|ref|YP_006775874.1| - 7.5e-06 25.1 0.4 1.4e-05 24.3 0.3 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.18 gi|407464992|ref|YP_006775874.1| - 0.00049 19.6 2.3 0.11 12.1 0.2 2.2 1 1 0 2 2 2 2 Cyclin, N-terminal domain Rrf2 PF02082.15 gi|407464992|ref|YP_006775874.1| - 0.0011 19.0 0.8 1.6 8.9 0.0 2.7 2 0 0 2 2 2 2 Transcriptional regulator DUF134 PF02001.11 gi|407464992|ref|YP_006775874.1| - 0.012 15.4 0.3 0.028 14.2 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function DUF134 HTH_3 PF01381.17 gi|407464992|ref|YP_006775874.1| - 0.025 14.4 0.7 0.21 11.4 0.2 2.4 2 0 0 2 2 2 0 Helix-turn-helix Sigma70_r4 PF04545.11 gi|407464992|ref|YP_006775874.1| - 0.044 13.0 0.1 1 8.6 0.0 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_37 PF13744.1 gi|407464992|ref|YP_006775874.1| - 0.065 13.0 1.7 0.15 11.8 0.6 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_10 PF04967.7 gi|407464992|ref|YP_006775874.1| - 0.12 11.9 0.3 7.6 6.1 0.1 2.7 2 0 0 2 2 2 0 HTH DNA binding domain TrmB PF01978.14 gi|407464992|ref|YP_006775874.1| - 0.13 12.0 0.3 3.7 7.3 0.1 2.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_26 PF13443.1 gi|407464992|ref|YP_006775874.1| - 0.26 11.5 0.3 0.26 11.5 0.2 3.0 4 0 0 4 4 4 0 Cro/C1-type HTH DNA-binding domain zf-FCS PF06467.9 gi|407464993|ref|YP_006775875.1| - 0.43 10.2 10.4 0.71 9.5 0.2 2.4 2 1 1 3 3 3 0 MYM-type Zinc finger with FCS sequence motif zf-CCHC_4 PF14392.1 gi|407464993|ref|YP_006775875.1| - 0.93 9.2 6.3 0.071 12.7 1.1 1.6 1 1 1 2 2 2 0 Zinc knuckle Fer4_10 PF13237.1 gi|407464993|ref|YP_006775875.1| - 2.4 8.0 7.4 1.5 8.6 0.5 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain MMR_HSR1_C PF08438.5 gi|407464994|ref|YP_006775876.1| - 1.4e-32 112.1 0.1 3.2e-32 110.9 0.0 1.7 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.18 gi|407464994|ref|YP_006775876.1| - 3.3e-16 59.2 0.0 1.1e-15 57.5 0.0 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.16 gi|407464994|ref|YP_006775876.1| - 1.8e-07 30.9 0.0 3.3e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 gi|407464994|ref|YP_006775876.1| - 4.5e-06 26.0 0.0 0.00034 19.9 0.0 2.8 3 0 0 3 3 3 1 Ferrous iron transport protein B Dynamin_N PF00350.18 gi|407464994|ref|YP_006775876.1| - 0.00037 20.3 0.9 0.15 11.8 0.0 3.0 2 1 0 3 3 3 2 Dynamin family GTP_EFTU PF00009.22 gi|407464994|ref|YP_006775876.1| - 0.0008 18.8 0.6 1.3 8.4 0.1 3.0 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain DUF3080 PF11279.3 gi|407464995|ref|YP_006775877.1| - 0.017 14.2 0.8 0.078 12.1 0.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3080) Pox_VLTF3 PF04947.9 gi|407464995|ref|YP_006775877.1| - 0.018 14.5 1.7 1.5 8.2 0.1 2.0 2 0 0 2 2 2 0 Poxvirus Late Transcription Factor VLTF3 like Pterin_4a PF01329.14 gi|407464995|ref|YP_006775877.1| - 0.024 14.3 0.2 0.047 13.4 0.1 1.6 1 1 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase Syntaxin-6_N PF09177.6 gi|407464995|ref|YP_006775877.1| - 0.093 13.1 1.9 0.19 12.1 0.7 1.8 1 1 0 2 2 2 0 Syntaxin 6, N-terminal SusD-like_3 PF14322.1 gi|407464995|ref|YP_006775877.1| - 0.24 11.4 1.1 0.63 10.0 0.8 1.8 1 1 0 1 1 1 0 Starch-binding associating with outer membrane CoA_binding_2 PF13380.1 gi|407464996|ref|YP_006775878.1| - 6.6e-40 135.8 0.1 7.9e-40 135.6 0.0 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.14 gi|407464996|ref|YP_006775878.1| - 1.1e-08 35.4 0.0 3e-08 34.0 0.0 1.6 2 0 0 2 2 2 1 CoA binding domain SpoU_sub_bind PF08032.7 gi|407464996|ref|YP_006775878.1| - 0.0089 16.1 0.3 0.081 13.1 0.1 2.1 2 1 0 2 2 2 1 RNA 2'-O ribose methyltransferase substrate binding Glyco_hydro_57 PF03065.10 gi|407464996|ref|YP_006775878.1| - 0.042 12.7 0.0 0.064 12.1 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 TroA PF01297.12 gi|407464996|ref|YP_006775878.1| - 0.051 12.8 0.1 0.1 11.8 0.0 1.5 2 0 0 2 2 2 0 Periplasmic solute binding protein family DUF4423 PF14394.1 gi|407464997|ref|YP_006775879.1| - 3.6e-06 26.6 0.5 5.1e-06 26.1 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HxlR PF01638.12 gi|407464997|ref|YP_006775879.1| - 0.00014 21.4 1.0 0.00029 20.3 0.5 1.5 1 1 1 2 2 2 1 HxlR-like helix-turn-helix Rio2_N PF09202.6 gi|407464997|ref|YP_006775879.1| - 0.00029 20.8 0.0 0.0012 18.8 0.0 2.0 2 0 0 2 2 2 1 Rio2, N-terminal TrmB PF01978.14 gi|407464997|ref|YP_006775879.1| - 0.00058 19.5 0.0 0.0009 18.9 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|407464997|ref|YP_006775879.1| - 0.0012 18.5 1.3 0.0026 17.5 0.9 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.1 gi|407464997|ref|YP_006775879.1| - 0.0029 17.6 0.7 0.0054 16.7 0.5 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF2250 PF10007.4 gi|407464997|ref|YP_006775879.1| - 0.0043 16.9 1.4 0.0055 16.5 0.3 1.7 1 1 1 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) TFIIE_alpha PF02002.12 gi|407464997|ref|YP_006775879.1| - 0.0085 15.5 0.5 0.012 15.0 0.3 1.4 1 1 0 1 1 1 1 TFIIE alpha subunit A_deaminase_N PF08451.6 gi|407464997|ref|YP_006775879.1| - 0.038 14.0 5.0 2.4 8.2 3.3 2.1 1 1 0 1 1 1 0 Adenosine/AMP deaminase N-terminal Sulfolobus_pRN PF05584.6 gi|407464997|ref|YP_006775879.1| - 0.038 13.9 0.1 0.068 13.1 0.0 1.4 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein MarR PF01047.17 gi|407464997|ref|YP_006775879.1| - 0.039 13.6 0.1 0.081 12.6 0.1 1.5 1 0 0 1 1 1 0 MarR family HTH_27 PF13463.1 gi|407464997|ref|YP_006775879.1| - 0.042 14.1 0.0 0.077 13.3 0.0 1.5 1 1 0 1 1 1 0 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|407464997|ref|YP_006775879.1| - 0.062 13.4 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator FeoC PF09012.5 gi|407464997|ref|YP_006775879.1| - 0.071 12.8 0.1 0.14 11.9 0.1 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator DUF1018 PF06252.7 gi|407464997|ref|YP_006775879.1| - 0.13 12.7 1.0 0.19 12.2 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1018) DUF919 PF06034.6 gi|407464997|ref|YP_006775879.1| - 0.95 9.1 5.4 0.65 9.6 0.9 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) Toxin_64 PF15542.1 gi|407464997|ref|YP_006775879.1| - 1.5 9.4 4.1 1.1 9.8 1.2 1.8 1 1 1 2 2 2 0 Putative toxin 64 BPL_LplA_LipB PF03099.14 gi|407464998|ref|YP_006775880.1| - 5.2e-21 74.9 0.0 1.1e-20 73.8 0.0 1.6 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.7 gi|407464998|ref|YP_006775880.1| - 6.4e-14 51.3 0.1 6.4e-14 51.3 0.1 2.2 3 0 0 3 3 3 1 HTH domain BPL_C PF02237.12 gi|407464998|ref|YP_006775880.1| - 5.7e-08 32.3 2.5 1.1e-07 31.3 1.7 1.6 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain HTH_24 PF13412.1 gi|407464998|ref|YP_006775880.1| - 0.00068 18.9 0.0 0.0015 17.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding UPF0122 PF04297.9 gi|407464998|ref|YP_006775880.1| - 0.011 15.6 1.0 0.039 13.9 0.1 2.1 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like Fe_dep_repress PF01325.14 gi|407464998|ref|YP_006775880.1| - 0.017 15.0 0.5 0.18 11.7 0.0 2.3 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.15 gi|407464998|ref|YP_006775880.1| - 0.039 14.0 0.1 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator MarR_2 PF12802.2 gi|407464998|ref|YP_006775880.1| - 0.078 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 MarR family Lipocalin_7 PF14651.1 gi|407464998|ref|YP_006775880.1| - 0.14 11.8 1.8 0.27 10.9 0.1 2.3 3 0 0 3 3 3 0 Lipocalin / cytosolic fatty-acid binding protein family AATF-Che1 PF13339.1 gi|407464999|ref|YP_006775881.1| - 0.0045 17.1 4.9 0.0064 16.6 3.4 1.4 1 1 0 1 1 1 1 Apoptosis antagonizing transcription factor DUF948 PF06103.6 gi|407464999|ref|YP_006775881.1| - 0.048 13.5 0.5 0.68 9.8 0.1 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) RPN7 PF10602.4 gi|407464999|ref|YP_006775881.1| - 0.055 12.8 0.1 0.07 12.4 0.1 1.1 1 0 0 1 1 1 0 26S proteasome subunit RPN7 TPR_1 PF00515.23 gi|407465000|ref|YP_006775882.1| - 5.5e-11 41.5 0.0 0.0027 17.2 0.0 3.9 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.1 gi|407465000|ref|YP_006775882.1| - 1.5e-09 37.3 0.0 5.9e-05 22.6 0.0 2.5 1 1 2 3 3 3 3 TPR repeat TPR_2 PF07719.12 gi|407465000|ref|YP_006775882.1| - 3.4e-08 32.7 0.0 0.0023 17.7 0.0 3.4 4 0 0 4 4 3 2 Tetratricopeptide repeat Peptidase_M10 PF00413.19 gi|407465000|ref|YP_006775882.1| - 9.2e-08 31.9 0.0 1.9e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 Matrixin TPR_8 PF13181.1 gi|407465000|ref|YP_006775882.1| - 8.5e-07 28.3 0.3 0.055 13.2 0.0 3.5 4 0 0 4 4 3 2 Tetratricopeptide repeat Reprolysin_5 PF13688.1 gi|407465000|ref|YP_006775882.1| - 8.2e-05 22.6 0.0 0.00015 21.7 0.0 1.5 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_2 PF13574.1 gi|407465000|ref|YP_006775882.1| - 9.3e-05 22.5 0.2 0.00022 21.3 0.1 1.6 2 0 0 2 2 1 1 Metallo-peptidase family M12B Reprolysin-like TPR_12 PF13424.1 gi|407465000|ref|YP_006775882.1| - 0.00034 20.4 0.0 0.83 9.6 0.0 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407465000|ref|YP_006775882.1| - 0.00098 19.1 0.2 14 6.1 0.0 4.0 4 0 0 4 4 3 0 Tetratricopeptide repeat Peptidase_M57 PF12388.3 gi|407465000|ref|YP_006775882.1| - 0.0017 17.6 0.0 0.0032 16.8 0.0 1.4 1 0 0 1 1 1 1 Dual-action HEIGH metallo-peptidase Apc3 PF12895.2 gi|407465000|ref|YP_006775882.1| - 0.0028 17.7 0.1 0.065 13.3 0.0 2.4 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 Reprolysin PF01421.14 gi|407465000|ref|YP_006775882.1| - 0.0047 16.5 0.0 0.0096 15.5 0.0 1.4 1 0 0 1 1 1 1 Reprolysin (M12B) family zinc metalloprotease Fis1_TPR_C PF14853.1 gi|407465000|ref|YP_006775882.1| - 0.0085 15.9 0.0 3.2 7.7 0.0 3.3 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.1 gi|407465000|ref|YP_006775882.1| - 0.01 15.5 0.0 5.9 6.9 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Reprolysin_4 PF13583.1 gi|407465000|ref|YP_006775882.1| - 0.01 15.3 0.0 0.018 14.6 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_3 PF13582.1 gi|407465000|ref|YP_006775882.1| - 0.011 16.2 0.2 0.037 14.5 0.1 1.9 2 0 0 2 2 2 0 Metallo-peptidase family M12B Reprolysin-like DUF4363 PF14276.1 gi|407465000|ref|YP_006775882.1| - 0.018 14.7 0.5 0.018 14.7 0.3 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4363) TPR_19 PF14559.1 gi|407465000|ref|YP_006775882.1| - 0.018 15.3 0.0 0.26 11.6 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407465000|ref|YP_006775882.1| - 0.019 15.5 0.0 1.4 9.7 0.0 3.1 1 1 2 3 3 3 0 Tetratricopeptide repeat Peptidase_M54 PF07998.6 gi|407465000|ref|YP_006775882.1| - 0.054 13.2 0.6 0.15 11.8 0.0 2.0 2 0 0 2 2 2 0 Peptidase family M54 ETRAMP PF09716.5 gi|407465000|ref|YP_006775882.1| - 0.095 12.6 1.7 0.39 10.7 0.5 2.4 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) TPR_16 PF13432.1 gi|407465000|ref|YP_006775882.1| - 0.12 13.1 0.0 0.93 10.2 0.0 2.4 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_9 PF13371.1 gi|407465000|ref|YP_006775882.1| - 0.15 11.9 0.0 0.35 10.7 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TFIIB PF00382.14 gi|407465001|ref|YP_006775883.1| - 2.2e-34 117.0 6.3 1.4e-18 66.4 0.2 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|407465001|ref|YP_006775883.1| - 1.3e-14 53.2 0.6 2.8e-14 52.1 0.4 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.18 gi|407465001|ref|YP_006775883.1| - 5.3e-05 22.7 0.3 0.00059 19.4 0.0 2.1 2 0 0 2 2 2 1 Cyclin, N-terminal domain zf-ribbon_3 PF13248.1 gi|407465001|ref|YP_006775883.1| - 0.0023 17.0 1.5 0.0054 15.9 1.0 1.6 1 0 0 1 1 1 1 zinc-ribbon domain DUF2387 PF09526.5 gi|407465001|ref|YP_006775883.1| - 0.0047 16.8 0.3 0.021 14.7 0.2 2.1 2 0 0 2 2 2 1 Probable metal-binding protein (DUF2387) Ribosomal_S27e PF01667.12 gi|407465001|ref|YP_006775883.1| - 0.02 14.4 1.4 0.047 13.2 0.9 1.6 1 0 0 1 1 1 0 Ribosomal protein S27 Zn_Tnp_IS1595 PF12760.2 gi|407465001|ref|YP_006775883.1| - 0.031 14.0 0.2 0.071 12.9 0.1 1.6 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.1 gi|407465001|ref|YP_006775883.1| - 0.039 14.2 0.9 0.1 12.9 0.2 2.0 2 0 0 2 2 1 0 Restriction alleviation protein Lar OrfB_Zn_ribbon PF07282.6 gi|407465001|ref|YP_006775883.1| - 0.041 13.5 0.3 0.1 12.2 0.2 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain TerY-C PF15616.1 gi|407465001|ref|YP_006775883.1| - 0.06 13.2 0.8 0.14 12.1 0.6 1.5 1 0 0 1 1 1 0 TerY-C metal binding domain Peptidase_M13_N PF05649.8 gi|407465001|ref|YP_006775883.1| - 0.064 12.2 1.2 0.58 9.1 1.0 2.2 2 1 0 2 2 2 0 Peptidase family M13 DZR PF12773.2 gi|407465001|ref|YP_006775883.1| - 0.076 12.8 0.4 0.17 11.7 0.3 1.5 1 0 0 1 1 1 0 Double zinc ribbon HMG_CoA_synt_C PF08540.5 gi|407465001|ref|YP_006775883.1| - 0.089 12.2 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A synthase C terminal A2L_zn_ribbon PF08792.5 gi|407465001|ref|YP_006775883.1| - 0.19 11.2 1.0 0.4 10.1 0.7 1.6 1 0 0 1 1 1 0 A2L zinc ribbon domain zf-C4_Topoisom PF01396.14 gi|407465001|ref|YP_006775883.1| - 0.69 9.4 4.7 0.48 9.9 1.9 1.8 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zinc_ribbon_2 PF13240.1 gi|407465001|ref|YP_006775883.1| - 3 7.4 7.2 24 4.5 5.0 2.2 1 1 0 1 1 1 0 zinc-ribbon domain Pribosyltran PF00156.22 gi|407465002|ref|YP_006775884.1| - 1.9e-08 34.0 0.1 0.00044 19.9 0.0 2.3 1 1 1 2 2 2 2 Phosphoribosyl transferase domain PHA_synth_III_E PF09712.5 gi|407465004|ref|YP_006775886.1| - 5.8e-10 39.0 0.0 7.9e-10 38.6 0.0 1.1 1 0 0 1 1 1 1 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) DUF4200 PF13863.1 gi|407465004|ref|YP_006775886.1| - 0.0078 16.1 4.5 0.055 13.4 0.1 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4200) BMFP PF04380.8 gi|407465004|ref|YP_006775886.1| - 0.014 15.4 0.2 0.048 13.8 0.0 1.9 2 0 0 2 2 2 0 Membrane fusogenic activity Apolipoprotein PF01442.13 gi|407465004|ref|YP_006775886.1| - 0.024 14.1 0.4 0.11 11.9 0.0 1.9 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain Phasin PF05597.6 gi|407465004|ref|YP_006775886.1| - 0.029 14.1 1.6 0.09 12.5 1.0 1.9 1 1 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DNA_repr_REX1B PF14966.1 gi|407465004|ref|YP_006775886.1| - 0.11 12.8 0.6 4.9 7.5 0.0 2.7 2 1 0 2 2 2 0 DNA repair REX1-B Bacillus_HBL PF05791.6 gi|407465004|ref|YP_006775886.1| - 0.12 11.7 4.8 0.14 11.5 0.1 2.3 2 0 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) BBP1_C PF15272.1 gi|407465004|ref|YP_006775886.1| - 0.18 11.3 4.6 0.14 11.6 2.4 1.5 1 1 0 1 1 1 0 Spindle pole body component BBP1, C-terminal IFP_35_N PF07334.8 gi|407465004|ref|YP_006775886.1| - 0.29 11.1 6.9 2.4 8.1 1.4 2.5 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus ATP-synt_B PF00430.13 gi|407465004|ref|YP_006775886.1| - 0.32 10.8 2.8 0.22 11.3 0.3 1.8 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) PhaC_N PF07167.8 gi|407465005|ref|YP_006775887.1| - 4.3e-13 49.0 0.1 9.5e-13 47.9 0.0 1.5 1 0 0 1 1 1 1 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Abhydrolase_1 PF00561.15 gi|407465005|ref|YP_006775887.1| - 3.3e-09 36.6 0.0 8.7e-09 35.2 0.0 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF3141 PF11339.3 gi|407465005|ref|YP_006775887.1| - 9.1e-07 27.5 0.0 1.4e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3141) Abhydrolase_6 PF12697.2 gi|407465005|ref|YP_006775887.1| - 1.3e-06 28.4 0.0 2.2e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|407465005|ref|YP_006775887.1| - 9.9e-06 25.3 0.0 4.4e-05 23.2 0.0 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family BAAT_C PF08840.6 gi|407465005|ref|YP_006775887.1| - 0.00097 18.8 0.0 0.0015 18.2 0.0 1.3 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.13 gi|407465005|ref|YP_006775887.1| - 0.0036 16.6 0.0 0.01 15.1 0.0 1.7 2 0 0 2 2 2 1 Dienelactone hydrolase family PHB_depo_C PF06850.6 gi|407465005|ref|YP_006775887.1| - 0.01 15.0 0.0 0.063 12.4 0.0 2.2 1 1 1 2 2 2 0 PHB de-polymerase C-terminus Rabaptin PF03528.10 gi|407465006|ref|YP_006775888.1| - 0.035 14.0 0.9 0.075 12.9 0.6 1.7 1 1 0 1 1 1 0 Rabaptin PrkA PF06798.7 gi|407465006|ref|YP_006775888.1| - 0.15 11.3 2.3 0.25 10.5 1.6 1.5 1 1 0 1 1 1 0 PrkA serine protein kinase C-terminal domain RIH_assoc PF08454.6 gi|407465006|ref|YP_006775888.1| - 0.16 11.5 3.1 0.28 10.8 2.0 1.7 1 1 0 1 1 1 0 RyR and IP3R Homology associated Tweety PF04906.8 gi|407465006|ref|YP_006775888.1| - 0.23 9.8 1.7 0.26 9.6 1.2 1.2 1 0 0 1 1 1 0 Tweety Fib_alpha PF08702.5 gi|407465006|ref|YP_006775888.1| - 0.27 11.3 5.7 0.22 11.6 0.3 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Wx5_PLAF3D7 PF09688.5 gi|407465006|ref|YP_006775888.1| - 1.4 8.8 6.5 0.8 9.6 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (Wx5_PLAF3D7) Antitoxin-MazE PF04014.13 gi|407465007|ref|YP_006775889.1| - 0.0016 18.1 0.2 0.0026 17.4 0.1 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE MraZ PF02381.13 gi|407465007|ref|YP_006775889.1| - 0.12 12.1 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 MraZ protein Abhydrolase_6 PF12697.2 gi|407465008|ref|YP_006775890.1| - 2.5e-38 132.2 0.0 2.9e-38 132.0 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|407465008|ref|YP_006775890.1| - 2.1e-24 86.3 0.0 3.8e-23 82.2 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|407465008|ref|YP_006775890.1| - 7.8e-18 64.6 0.0 2.2e-17 63.1 0.0 1.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.11 gi|407465008|ref|YP_006775890.1| - 1.3e-06 28.0 0.0 0.023 14.1 0.0 2.7 3 0 0 3 3 3 2 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.3 gi|407465008|ref|YP_006775890.1| - 6.3e-06 25.9 0.0 1.5e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 Putative lysophospholipase Ndr PF03096.9 gi|407465008|ref|YP_006775890.1| - 0.00012 20.6 0.0 0.00017 20.1 0.0 1.2 1 0 0 1 1 1 1 Ndr family DLH PF01738.13 gi|407465008|ref|YP_006775890.1| - 0.00061 19.1 0.0 0.002 17.4 0.0 1.8 2 0 0 2 2 2 1 Dienelactone hydrolase family Ser_hydrolase PF06821.8 gi|407465008|ref|YP_006775890.1| - 0.0034 16.9 0.0 0.64 9.5 0.0 2.5 2 1 0 2 2 2 1 Serine hydrolase BAAT_C PF08840.6 gi|407465008|ref|YP_006775890.1| - 0.0062 16.2 0.0 0.014 15.1 0.0 1.5 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal FSH1 PF03959.8 gi|407465008|ref|YP_006775890.1| - 0.011 15.1 0.0 0.059 12.8 0.0 2.2 2 1 0 2 2 2 0 Serine hydrolase (FSH1) UPF0227 PF05728.7 gi|407465008|ref|YP_006775890.1| - 0.013 15.2 0.0 0.053 13.2 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) Abhydrolase_3 PF07859.8 gi|407465008|ref|YP_006775890.1| - 0.017 14.6 0.0 0.043 13.4 0.0 1.7 1 1 0 1 1 1 0 alpha/beta hydrolase fold Abhydro_lipase PF04083.11 gi|407465008|ref|YP_006775890.1| - 0.025 13.9 0.0 0.042 13.2 0.0 1.3 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region Abhydrolase_4 PF08386.5 gi|407465008|ref|YP_006775890.1| - 0.07 13.0 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein Usp PF00582.21 gi|407465009|ref|YP_006775891.1| - 6.2e-27 94.5 0.0 7e-27 94.3 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family PMSR PF01625.16 gi|407465010|ref|YP_006775892.1| - 1.7e-64 216.4 1.0 1.9e-64 216.2 0.7 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Robl_LC7 PF03259.12 gi|407465012|ref|YP_006775894.1| - 0.066 12.7 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Roadblock/LC7 domain Methyltransf_11 PF08241.7 gi|407465014|ref|YP_006775896.1| - 5.4e-11 42.8 0.0 9.5e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407465014|ref|YP_006775896.1| - 2.3e-08 33.9 0.0 3.7e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|407465014|ref|YP_006775896.1| - 8e-05 22.2 0.0 0.00016 21.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|407465014|ref|YP_006775896.1| - 0.0019 17.3 0.0 0.0054 15.8 0.0 1.7 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.13 gi|407465014|ref|YP_006775896.1| - 0.006 15.7 0.0 0.011 14.8 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|407465014|ref|YP_006775896.1| - 0.017 15.6 0.0 0.035 14.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_8 PF05148.10 gi|407465014|ref|YP_006775896.1| - 0.04 13.5 0.0 0.075 12.6 0.0 1.5 1 0 0 1 1 1 0 Hypothetical methyltransferase RDD PF06271.7 gi|407465015|ref|YP_006775897.1| - 1.7e-23 82.9 2.3 2e-23 82.7 1.6 1.1 1 0 0 1 1 1 1 RDD family HATPase_c PF02518.21 gi|407465016|ref|YP_006775898.1| - 1.1e-25 89.4 0.1 2.3e-25 88.4 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.1 gi|407465016|ref|YP_006775898.1| - 2.9e-11 42.9 0.0 2e-10 40.2 0.0 2.0 2 0 0 2 2 2 1 GHKL domain HisKA PF00512.20 gi|407465016|ref|YP_006775898.1| - 1e-10 41.4 0.1 2.2e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.1 gi|407465016|ref|YP_006775898.1| - 7.9e-05 22.4 0.0 0.00014 21.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.1 gi|407465016|ref|YP_006775898.1| - 0.00016 21.3 0.0 0.00032 20.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|407465017|ref|YP_006775899.1| - 2.6e-24 85.5 0.1 3e-24 85.3 0.0 1.0 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|407465017|ref|YP_006775899.1| - 2.7e-12 46.4 0.0 3.2e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.6 gi|407465017|ref|YP_006775899.1| - 8e-11 41.8 0.1 1e-10 41.5 0.1 1.2 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.5 gi|407465017|ref|YP_006775899.1| - 2.1e-09 37.3 0.0 2.5e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|407465017|ref|YP_006775899.1| - 0.00022 20.9 0.0 0.00034 20.3 0.0 1.5 1 0 0 1 1 1 1 PAS domain Aminotran_3 PF00202.16 gi|407465018|ref|YP_006775900.1| - 1e-54 185.6 0.1 1.4e-54 185.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III DUF2862 PF11061.3 gi|407465019|ref|YP_006775901.1| - 0.052 13.2 1.1 0.12 12.1 0.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2862) DZR PF12773.2 gi|407465020|ref|YP_006775902.1| - 0.0014 18.4 5.2 0.041 13.7 3.9 2.1 1 1 1 2 2 2 1 Double zinc ribbon SprT-like PF10263.4 gi|407465020|ref|YP_006775902.1| - 0.097 12.3 0.2 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 SprT-like family Prok-RING_4 PF14447.1 gi|407465020|ref|YP_006775902.1| - 0.12 11.9 0.5 0.12 11.9 0.4 1.8 2 1 0 2 2 2 0 Prokaryotic RING finger family 4 Flavi_glycoprot PF00869.15 gi|407465020|ref|YP_006775902.1| - 0.16 10.9 1.2 0.18 10.7 0.8 1.0 1 0 0 1 1 1 0 Flavivirus glycoprotein, central and dimerisation domains zf-ribbon_3 PF13248.1 gi|407465020|ref|YP_006775902.1| - 0.25 10.6 6.1 1.1 8.5 0.5 2.7 2 1 0 2 2 2 0 zinc-ribbon domain DUF329 PF03884.9 gi|407465020|ref|YP_006775902.1| - 0.27 10.8 2.0 1.8 8.1 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF329) zf-NADH-PPase PF09297.6 gi|407465020|ref|YP_006775902.1| - 0.64 9.5 9.6 2.4 7.7 0.1 3.4 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain HypA PF01155.14 gi|407465020|ref|YP_006775902.1| - 0.7 9.5 2.8 2.5 7.8 2.0 1.8 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family Zn_ribbon_recom PF13408.1 gi|407465020|ref|YP_006775902.1| - 0.83 9.9 0.1 0.83 9.9 0.1 2.8 3 0 0 3 3 3 0 Recombinase zinc beta ribbon domain zinc-ribbons_6 PF07191.7 gi|407465020|ref|YP_006775902.1| - 0.88 9.3 4.3 2.6 7.9 0.2 2.2 1 1 1 2 2 2 0 zinc-ribbons zf-piccolo PF05715.8 gi|407465020|ref|YP_006775902.1| - 0.93 9.5 4.2 1.5 8.8 2.8 1.5 1 1 0 1 1 1 0 Piccolo Zn-finger zf-Apc11 PF12861.2 gi|407465020|ref|YP_006775902.1| - 1.1 9.1 4.2 4.2 7.2 2.9 2.0 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C2H2_4 PF13894.1 gi|407465020|ref|YP_006775902.1| - 1.5 9.3 10.7 2.7 8.5 0.7 3.3 3 1 0 3 3 3 0 C2H2-type zinc finger RecR PF02132.10 gi|407465020|ref|YP_006775902.1| - 3.7 7.0 8.3 0.67 9.4 0.3 3.1 4 0 0 4 4 4 0 RecR protein zf-C2H2 PF00096.21 gi|407465020|ref|YP_006775902.1| - 5 7.6 9.9 10 6.7 0.5 3.2 3 0 0 3 3 3 0 Zinc finger, C2H2 type A2L_zn_ribbon PF08792.5 gi|407465020|ref|YP_006775902.1| - 6.1 6.4 7.0 11 5.6 0.1 3.1 3 0 0 3 3 3 0 A2L zinc ribbon domain Ribosomal_S27 PF01599.14 gi|407465020|ref|YP_006775902.1| - 6.3 6.7 6.5 25 4.7 0.3 2.5 2 0 0 2 2 2 0 Ribosomal protein S27a zf-HIT PF04438.11 gi|407465020|ref|YP_006775902.1| - 8.1 6.1 9.2 49 3.7 0.1 3.4 3 1 1 4 4 4 0 HIT zinc finger TrkH PF02386.11 gi|407465023|ref|YP_006775905.1| - 3.7e-26 91.5 31.8 1.7e-25 89.3 12.9 3.2 1 1 0 2 2 2 2 Cation transport protein CBS PF00571.23 gi|407465023|ref|YP_006775905.1| - 1e-17 63.6 1.4 9.9e-10 38.0 0.1 2.4 2 0 0 2 2 2 2 CBS domain Sigma54_CBD PF04963.8 gi|407465024|ref|YP_006775906.1| - 0.0055 16.1 0.2 0.0068 15.8 0.2 1.1 1 0 0 1 1 1 1 Sigma-54 factor, core binding domain DUF4441 PF14536.1 gi|407465024|ref|YP_006775906.1| - 0.022 14.7 3.1 0.026 14.4 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) DUF148 PF02520.12 gi|407465024|ref|YP_006775906.1| - 0.027 14.2 1.1 0.034 13.9 0.5 1.3 1 1 0 1 1 1 0 Domain of unknown function DUF148 Enkurin PF13864.1 gi|407465024|ref|YP_006775906.1| - 0.029 14.5 0.5 0.037 14.2 0.4 1.1 1 0 0 1 1 1 0 Calmodulin-binding DUF2400 PF09674.5 gi|407465024|ref|YP_006775906.1| - 0.17 11.5 1.2 0.17 11.5 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) DUF1657 PF07870.6 gi|407465024|ref|YP_006775906.1| - 0.18 11.4 2.4 0.31 10.7 1.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1657) HTH_IclR PF09339.5 gi|407465025|ref|YP_006775907.1| - 0.00069 19.1 0.0 0.0011 18.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.14 gi|407465025|ref|YP_006775907.1| - 0.012 15.2 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|407465025|ref|YP_006775907.1| - 0.042 13.5 0.0 0.13 11.9 0.0 1.7 2 0 0 2 2 2 0 MarR family Tn7_Tnp_TnsA_C PF08721.6 gi|407465025|ref|YP_006775907.1| - 0.044 13.8 0.3 1.8 8.6 0.0 2.4 2 0 0 2 2 2 0 TnsA endonuclease C terminal HTH_20 PF12840.2 gi|407465025|ref|YP_006775907.1| - 0.08 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.1 gi|407465025|ref|YP_006775907.1| - 0.091 13.0 0.0 0.21 11.9 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain PRANC PF09372.5 gi|407465025|ref|YP_006775907.1| - 1.1 9.2 5.4 1.1 9.2 1.5 2.6 2 1 0 2 2 2 0 PRANC domain Response_reg PF00072.19 gi|407465026|ref|YP_006775908.1| - 1.6e-17 63.5 0.3 2.6e-17 62.8 0.2 1.3 1 0 0 1 1 1 1 Response regulator receiver domain zf-CCHC_4 PF14392.1 gi|407465026|ref|YP_006775908.1| - 0.057 13.1 0.1 0.13 11.9 0.1 1.6 1 0 0 1 1 1 0 Zinc knuckle MgrB PF13998.1 gi|407465027|ref|YP_006775909.1| - 0.061 13.1 0.1 0.14 11.9 0.1 1.6 1 0 0 1 1 1 0 MgrB protein CARDB PF07705.6 gi|407465028|ref|YP_006775910.1| - 4.2e-08 33.1 0.3 7e-08 32.4 0.2 1.3 1 0 0 1 1 1 1 CARDB DUF11 PF01345.13 gi|407465028|ref|YP_006775910.1| - 1.1e-06 28.5 3.5 4.6e-06 26.5 0.6 2.2 2 0 0 2 2 2 1 Domain of unknown function DUF11 NPCBM_assoc PF10633.4 gi|407465028|ref|YP_006775910.1| - 0.00085 19.3 0.0 0.26 11.3 0.1 2.3 2 0 0 2 2 2 2 NPCBM-associated, NEW3 domain of alpha-galactosidase A2M PF00207.17 gi|407465028|ref|YP_006775910.1| - 0.025 14.1 0.0 0.057 12.9 0.0 1.7 2 0 0 2 2 2 0 Alpha-2-macroglobulin family Big_1 PF02369.11 gi|407465028|ref|YP_006775910.1| - 0.16 11.8 1.2 2 8.3 0.1 2.2 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 1) DUF2393 PF09624.5 gi|407465028|ref|YP_006775910.1| - 2.9 7.4 6.0 3.7 7.0 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2393) Peptidase_M75 PF09375.5 gi|407465029|ref|YP_006775911.1| - 1.9e-07 30.7 10.7 0.00027 20.3 1.4 3.3 3 0 0 3 3 3 2 Imelysin FlaF PF07309.6 gi|407465029|ref|YP_006775911.1| - 0.00098 18.9 4.3 0.53 10.1 0.2 2.5 2 0 0 2 2 2 2 Flagellar protein FlaF GerPC PF10737.4 gi|407465029|ref|YP_006775911.1| - 0.001 18.8 16.7 0.021 14.6 0.3 4.8 4 1 1 5 5 5 2 Spore germination protein GerPC Prismane PF03063.15 gi|407465029|ref|YP_006775911.1| - 0.0013 17.1 8.2 0.081 11.2 0.3 3.1 3 0 0 3 3 3 3 Prismane/CO dehydrogenase family DUF1672 PF07901.6 gi|407465029|ref|YP_006775911.1| - 0.019 13.9 0.3 6.7 5.6 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1672) YukD PF08817.5 gi|407465029|ref|YP_006775911.1| - 0.031 14.8 0.6 19 5.8 0.0 3.0 3 0 0 3 3 3 0 WXG100 protein secretion system (Wss), protein YukD DUF4285 PF14113.1 gi|407465029|ref|YP_006775911.1| - 0.043 13.8 0.0 17 5.4 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4285) Pox_VLTF3 PF04947.9 gi|407465029|ref|YP_006775911.1| - 0.098 12.1 0.3 1.8 8.0 0.0 2.9 4 0 0 4 4 4 0 Poxvirus Late Transcription Factor VLTF3 like Mer2 PF09074.5 gi|407465029|ref|YP_006775911.1| - 0.53 10.1 7.3 7.5 6.4 0.1 3.4 3 1 1 4 4 4 0 Mer2 FdhE PF04216.7 gi|407465029|ref|YP_006775911.1| - 4.4 6.9 10.6 8.4 6.0 0.8 2.9 3 1 0 3 3 3 0 Protein involved in formate dehydrogenase formation Hydantoinase_A PF01968.13 gi|407465030|ref|YP_006775912.1| - 5.9e-54 183.1 1.3 5.9e-54 183.1 0.9 2.2 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|407465030|ref|YP_006775912.1| - 2.4e-23 82.5 7.5 8.1e-22 77.5 3.0 2.9 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|407465030|ref|YP_006775912.1| - 2.4e-07 29.4 3.6 0.00011 20.7 0.5 2.6 2 0 0 2 2 2 2 MutL protein FGGY_N PF00370.16 gi|407465030|ref|YP_006775912.1| - 9.2e-07 28.4 1.1 3e-06 26.7 0.8 1.9 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain BcrAD_BadFG PF01869.15 gi|407465030|ref|YP_006775912.1| - 0.00026 20.3 8.2 0.00049 19.4 1.8 2.8 2 1 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family HAD PF12710.2 gi|407465030|ref|YP_006775912.1| - 0.029 14.5 0.1 0.18 11.9 0.0 2.3 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase FtsA PF14450.1 gi|407465030|ref|YP_006775912.1| - 0.2 11.5 10.1 12 5.7 0.0 3.1 2 1 0 2 2 2 0 Cell division protein FtsA FTR1 PF03239.9 gi|407465031|ref|YP_006775913.1| - 1.8e-21 76.4 11.3 3.3e-21 75.5 7.8 1.4 1 0 0 1 1 1 1 Iron permease FTR1 family Sec3_C_2 PF15278.1 gi|407465031|ref|YP_006775913.1| - 0.051 13.7 0.3 0.19 11.8 0.2 2.0 1 0 0 1 1 1 0 Sec3 exocyst complex subunit DegQ PF08181.6 gi|407465031|ref|YP_006775913.1| - 0.96 9.2 6.9 0.4 10.4 0.7 3.4 3 0 0 3 3 3 0 DegQ (SacQ) family TrmB PF01978.14 gi|407465032|ref|YP_006775914.1| - 0.0046 16.6 0.1 0.0058 16.3 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|407465032|ref|YP_006775914.1| - 0.013 15.2 0.0 0.018 14.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Gp_dh_C PF02800.15 gi|407465032|ref|YP_006775914.1| - 0.021 14.2 0.2 0.029 13.8 0.2 1.2 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A_thal_3526 PF09713.5 gi|407465034|ref|YP_006775916.1| - 0.025 14.6 0.2 0.031 14.3 0.1 1.3 1 1 0 1 1 1 0 Plant protein 1589 of unknown function (A_thal_3526) FEZ PF07763.8 gi|407465035|ref|YP_006775917.1| - 0.18 11.5 5.0 0.15 11.7 2.3 1.6 1 1 1 2 2 2 0 FEZ-like protein Occludin_ELL PF07303.8 gi|407465035|ref|YP_006775917.1| - 0.47 11.2 3.0 2.2 9.0 2.1 1.8 1 1 1 2 2 2 0 Occludin homology domain S100PBPR PF15427.1 gi|407465036|ref|YP_006775918.1| - 0.15 11.1 3.8 0.96 8.4 0.1 2.1 1 1 1 2 2 2 0 S100P-binding protein DUF1687 PF07955.6 gi|407465036|ref|YP_006775918.1| - 0.2 11.6 3.2 0.4 10.6 2.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1687) DUF4179 PF13786.1 gi|407465038|ref|YP_006775920.1| - 0.0084 16.3 1.5 0.0084 16.3 1.1 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4179) T2SF PF00482.18 gi|407465039|ref|YP_006775921.1| - 4.4e-16 58.9 1.0 6.3e-12 45.4 0.1 4.1 5 0 0 5 5 5 2 Type II secretion system (T2SS), protein F DUF1628 PF07790.6 gi|407465040|ref|YP_006775922.1| - 0.011 16.4 3.6 0.024 15.3 2.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1628) DUF824 PF05688.6 gi|407465040|ref|YP_006775922.1| - 0.028 14.0 1.5 1.1 8.8 0.0 2.6 2 0 0 2 2 2 0 Salmonella repeat of unknown function (DUF824) T2SE PF00437.15 gi|407465042|ref|YP_006775924.1| - 1.8e-42 145.1 0.1 3.6e-42 144.1 0.1 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|407465042|ref|YP_006775924.1| - 0.0012 18.3 0.3 0.0029 17.1 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.7 gi|407465042|ref|YP_006775924.1| - 0.0069 15.5 0.0 0.017 14.2 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin ABC_tran PF00005.22 gi|407465042|ref|YP_006775924.1| - 0.012 15.8 0.1 0.037 14.3 0.1 2.1 1 1 0 1 1 1 0 ABC transporter PadR PF03551.9 gi|407465045|ref|YP_006775927.1| - 9.6e-05 22.0 0.1 0.032 13.9 0.0 2.5 2 0 0 2 2 2 2 Transcriptional regulator PadR-like family TrmB PF01978.14 gi|407465045|ref|YP_006775927.1| - 0.018 14.7 0.1 0.27 10.9 0.0 2.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Replic_Relax PF13814.1 gi|407465045|ref|YP_006775927.1| - 0.075 12.8 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Replication-relaxation Phage-MuB_C PF09077.6 gi|407465045|ref|YP_006775927.1| - 0.11 12.1 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Mu B transposition protein, C terminal ParBc PF02195.13 gi|407465046|ref|YP_006775928.1| - 3.1e-09 36.8 0.0 8.1e-09 35.4 0.0 1.7 1 0 0 1 1 1 1 ParB-like nuclease domain ParBc_2 PF08857.6 gi|407465046|ref|YP_006775928.1| - 0.00077 19.3 0.0 0.0019 18.0 0.0 1.7 1 0 0 1 1 1 1 Putative ParB-like nuclease Bot1p PF12298.3 gi|407465046|ref|YP_006775928.1| - 0.002 18.1 0.4 0.0041 17.1 0.2 1.5 1 0 0 1 1 1 1 Eukaryotic mitochondrial regulator protein HCaRG PF07258.9 gi|407465046|ref|YP_006775928.1| - 0.065 12.7 1.0 0.12 11.9 0.1 1.8 2 0 0 2 2 2 0 HCaRG protein zf-CSL PF05207.8 gi|407465046|ref|YP_006775928.1| - 0.089 12.3 0.0 0.21 11.1 0.0 1.6 1 0 0 1 1 1 0 CSL zinc finger DUF1268 PF06896.6 gi|407465047|ref|YP_006775929.1| - 0.011 16.0 2.2 0.027 14.7 0.4 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF1268) TF_Zn_Ribbon PF08271.7 gi|407465047|ref|YP_006775929.1| - 0.033 13.4 0.5 0.068 12.5 0.4 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding Baculo_PEP_N PF04512.7 gi|407465047|ref|YP_006775929.1| - 0.15 12.0 0.6 16 5.5 0.1 2.5 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, N terminus TrmB PF01978.14 gi|407465048|ref|YP_006775930.1| - 0.0031 17.1 0.2 0.0056 16.3 0.2 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FUR PF01475.14 gi|407465048|ref|YP_006775930.1| - 0.018 14.9 0.3 0.033 14.1 0.1 1.5 1 1 0 1 1 1 0 Ferric uptake regulator family HTH_36 PF13730.1 gi|407465048|ref|YP_006775930.1| - 0.024 14.7 0.3 0.045 13.8 0.2 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain DUF2250 PF10007.4 gi|407465048|ref|YP_006775930.1| - 0.027 14.3 1.8 0.03 14.2 0.6 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_20 PF12840.2 gi|407465048|ref|YP_006775930.1| - 0.029 14.1 0.0 0.04 13.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain PadR PF03551.9 gi|407465048|ref|YP_006775930.1| - 0.048 13.4 0.3 0.088 12.5 0.1 1.6 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_Tnp_IS630 PF01710.11 gi|407465048|ref|YP_006775930.1| - 0.058 13.0 0.1 0.094 12.3 0.0 1.5 1 1 0 1 1 1 0 Transposase DUF3195 PF11424.3 gi|407465048|ref|YP_006775930.1| - 0.097 12.8 0.1 0.23 11.6 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3195) HTH_7 PF02796.10 gi|407465048|ref|YP_006775930.1| - 0.11 12.4 1.7 0.33 10.8 0.3 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain of resolvase HTH_IclR PF09339.5 gi|407465048|ref|YP_006775930.1| - 0.11 12.1 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Innexin PF00876.13 gi|407465049|ref|YP_006775931.1| - 0.12 11.4 0.1 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Innexin DUF3188 PF11384.3 gi|407465051|ref|YP_006775933.1| - 0.02 14.4 0.9 0.75 9.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3188) DUF308 PF03729.8 gi|407465051|ref|YP_006775933.1| - 0.58 10.1 5.7 8.8 6.4 0.9 2.1 2 0 0 2 2 2 0 Short repeat of unknown function (DUF308) PepSY_TM PF03929.11 gi|407465051|ref|YP_006775933.1| - 3.4 8.2 6.0 0.7 10.4 0.9 2.1 2 0 0 2 2 2 0 PepSY-associated TM helix VRR_NUC PF08774.6 gi|407465055|ref|YP_006775937.1| - 0.022 14.7 0.1 0.058 13.4 0.1 1.7 1 0 0 1 1 1 0 VRR-NUC domain DUF3883 PF13020.1 gi|407465055|ref|YP_006775937.1| - 0.023 14.3 1.2 0.023 14.3 0.8 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF3883) DUF3287 PF11690.3 gi|407465056|ref|YP_006775938.1| - 0.086 12.9 0.2 0.22 11.5 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) DUF87 PF01935.12 gi|407465058|ref|YP_006775940.1| - 0.00082 19.2 0.0 0.00096 19.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_18 PF13238.1 gi|407465058|ref|YP_006775940.1| - 0.0016 18.7 0.0 0.0019 18.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain Pox_A32 PF04665.7 gi|407465058|ref|YP_006775940.1| - 0.0021 17.4 0.0 0.0022 17.3 0.0 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein Zeta_toxin PF06414.7 gi|407465058|ref|YP_006775940.1| - 0.0022 17.1 0.0 0.0024 16.9 0.0 1.1 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.1 gi|407465058|ref|YP_006775940.1| - 0.0039 17.3 0.0 0.0041 17.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.4 gi|407465058|ref|YP_006775940.1| - 0.0042 16.1 0.1 0.0057 15.6 0.1 1.3 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) Sigma54_activat PF00158.21 gi|407465058|ref|YP_006775940.1| - 0.0043 16.5 0.0 0.0043 16.5 0.0 1.1 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_16 PF13191.1 gi|407465058|ref|YP_006775940.1| - 0.0045 16.9 0.0 0.0045 16.9 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.1 gi|407465058|ref|YP_006775940.1| - 0.0071 16.0 0.0 0.0071 16.0 0.0 1.1 1 0 0 1 1 1 1 Part of AAA domain RNA_helicase PF00910.17 gi|407465058|ref|YP_006775940.1| - 0.0092 16.1 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 1 RNA helicase ABC_tran PF00005.22 gi|407465058|ref|YP_006775940.1| - 0.01 16.1 0.0 0.01 16.1 0.0 1.1 1 0 0 1 1 1 0 ABC transporter FtsK_SpoIIIE PF01580.13 gi|407465058|ref|YP_006775940.1| - 0.029 13.8 0.0 0.031 13.7 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_29 PF13555.1 gi|407465058|ref|YP_006775940.1| - 0.034 13.6 0.0 0.043 13.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain T2SE PF00437.15 gi|407465058|ref|YP_006775940.1| - 0.035 13.0 0.0 0.035 13.0 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein PhoH PF02562.11 gi|407465058|ref|YP_006775940.1| - 0.063 12.5 0.0 0.071 12.3 0.0 1.1 1 0 0 1 1 1 0 PhoH-like protein AAA_33 PF13671.1 gi|407465058|ref|YP_006775940.1| - 0.075 12.9 0.0 0.13 12.1 0.0 1.5 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.4 gi|407465058|ref|YP_006775940.1| - 0.082 11.5 0.0 0.092 11.3 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_5 PF07728.9 gi|407465058|ref|YP_006775940.1| - 0.085 12.5 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NACHT PF05729.7 gi|407465058|ref|YP_006775940.1| - 0.091 12.4 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 NACHT domain PRK PF00485.13 gi|407465058|ref|YP_006775940.1| - 0.098 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NB-ARC PF00931.17 gi|407465058|ref|YP_006775940.1| - 0.1 11.4 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain DUF258 PF03193.11 gi|407465058|ref|YP_006775940.1| - 0.11 11.7 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|407465058|ref|YP_006775940.1| - 0.13 13.0 0.0 0.15 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|407465058|ref|YP_006775940.1| - 0.13 11.3 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MobB PF03205.9 gi|407465058|ref|YP_006775940.1| - 0.14 11.8 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B RelA_SpoT PF04607.12 gi|407465059|ref|YP_006775941.1| - 2.7e-23 82.1 2.5 2.7e-23 82.1 1.7 2.2 3 0 0 3 3 3 1 Region found in RelA / SpoT proteins DREV PF05219.7 gi|407465059|ref|YP_006775941.1| - 0.026 13.4 0.0 0.044 12.6 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase TFIIE_alpha PF02002.12 gi|407465061|ref|YP_006775943.1| - 0.0086 15.5 9.5 0.0086 15.5 6.6 1.5 1 1 1 2 2 2 1 TFIIE alpha subunit DUF883 PF05957.8 gi|407465061|ref|YP_006775943.1| - 0.22 11.9 5.7 0.27 11.6 3.3 1.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Ish1 PF10281.4 gi|407465061|ref|YP_006775943.1| - 1.3 9.1 5.4 0.8 9.8 0.6 2.6 3 0 0 3 3 3 0 Putative stress-responsive nuclear envelope protein Phage_int_SAM_4 PF13495.1 gi|407465062|ref|YP_006775944.1| - 3.4e-07 30.4 0.0 5.3e-06 26.6 0.0 2.4 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_integrase PF00589.17 gi|407465062|ref|YP_006775944.1| - 4.2e-07 29.7 0.6 1.3e-06 28.2 0.0 2.1 2 1 0 2 2 2 1 Phage integrase family Phage_int_SAM_1 PF02899.12 gi|407465062|ref|YP_006775944.1| - 0.0003 20.8 0.1 0.17 12.0 0.0 2.8 2 0 0 2 2 2 2 Phage integrase, N-terminal SAM-like domain TPR_11 PF13414.1 gi|407465063|ref|YP_006775945.1| - 9.1e-58 191.8 20.9 5.8e-17 61.1 1.0 4.3 1 1 5 6 6 6 6 TPR repeat TPR_2 PF07719.12 gi|407465063|ref|YP_006775945.1| - 7.3e-40 131.6 2.0 1.1e-07 31.1 0.2 7.2 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_1 PF00515.23 gi|407465063|ref|YP_006775945.1| - 1.8e-38 128.6 12.1 1.4e-07 30.7 0.0 7.1 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407465063|ref|YP_006775945.1| - 7.1e-32 106.9 6.5 8.4e-08 31.8 0.0 6.6 7 0 0 7 7 6 5 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407465063|ref|YP_006775945.1| - 4.8e-30 103.5 0.0 5.6e-08 33.2 0.0 5.0 2 2 3 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407465063|ref|YP_006775945.1| - 2.5e-28 97.8 4.7 2.7e-09 36.8 0.1 4.7 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407465063|ref|YP_006775945.1| - 4.6e-26 88.6 9.7 6.3e-06 25.6 0.0 7.3 5 1 2 7 7 7 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407465063|ref|YP_006775945.1| - 1.4e-25 87.4 0.0 0.00041 20.7 0.0 7.1 1 1 6 7 7 7 7 Tetratricopeptide repeat TPR_6 PF13174.1 gi|407465063|ref|YP_006775945.1| - 1.6e-24 84.6 0.1 0.071 13.6 0.0 7.2 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407465063|ref|YP_006775945.1| - 4e-21 75.1 1.4 1.5e-05 25.1 0.1 4.8 2 1 3 6 6 6 4 Tetratricopeptide repeat TPR_9 PF13371.1 gi|407465063|ref|YP_006775945.1| - 6.9e-17 61.0 0.0 4.1e-08 32.9 0.0 4.2 1 1 4 5 5 5 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|407465063|ref|YP_006775945.1| - 5.6e-16 58.4 3.3 7.8e-06 25.9 0.1 3.1 2 1 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 gi|407465063|ref|YP_006775945.1| - 1.7e-12 46.1 0.0 0.0094 15.6 0.0 5.8 6 1 1 7 7 5 2 Tetratricopeptide repeat NARP1 PF12569.3 gi|407465063|ref|YP_006775945.1| - 2.4e-12 46.3 4.1 1.7e-05 23.7 0.1 3.0 1 1 2 3 3 3 3 NMDA receptor-regulated protein 1 MIT PF04212.13 gi|407465063|ref|YP_006775945.1| - 2.2e-08 33.8 9.2 0.073 12.9 0.1 6.1 4 2 3 7 7 7 2 MIT (microtubule interacting and transport) domain TPR_20 PF14561.1 gi|407465063|ref|YP_006775945.1| - 2.7e-08 33.7 5.3 0.081 13.0 0.0 5.1 1 1 4 6 6 6 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|407465063|ref|YP_006775945.1| - 3.3e-08 33.2 3.8 0.021 14.6 0.0 5.8 4 3 3 7 7 7 1 Fis1 C-terminal tetratricopeptide repeat PPTA PF01239.17 gi|407465063|ref|YP_006775945.1| - 2.3e-06 26.7 2.0 0.55 9.6 0.0 4.9 5 0 0 5 5 4 1 Protein prenyltransferase alpha subunit repeat TPR_10 PF13374.1 gi|407465063|ref|YP_006775945.1| - 7.4e-05 22.5 2.0 42 4.2 0.2 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat Rapsyn_N PF10579.4 gi|407465063|ref|YP_006775945.1| - 0.00011 21.9 0.1 4.1 7.2 0.0 4.5 1 1 2 4 4 4 1 Rapsyn N-terminal myristoylation and linker region TPR_15 PF13429.1 gi|407465063|ref|YP_006775945.1| - 0.00012 21.2 0.3 0.47 9.4 0.0 3.4 1 1 3 4 4 4 2 Tetratricopeptide repeat TPR_4 PF07721.9 gi|407465063|ref|YP_006775945.1| - 0.00015 21.8 0.0 25 5.6 0.0 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|407465063|ref|YP_006775945.1| - 0.00017 20.9 5.6 0.15 11.2 0.1 3.7 1 1 3 4 4 4 2 Coatomer epsilon subunit Thioredoxin_6 PF13848.1 gi|407465063|ref|YP_006775945.1| - 0.00044 20.1 0.3 0.082 12.6 0.1 2.5 2 0 0 2 2 2 1 Thioredoxin-like domain DUF3856 PF12968.2 gi|407465063|ref|YP_006775945.1| - 0.0005 19.9 0.9 31 4.3 0.0 5.0 1 1 5 6 6 6 0 Domain of Unknown Function (DUF3856) PPR PF01535.15 gi|407465063|ref|YP_006775945.1| - 0.0006 19.6 6.5 1.6 8.8 0.0 5.9 7 0 0 7 7 5 1 PPR repeat BTAD PF03704.12 gi|407465063|ref|YP_006775945.1| - 0.002 18.4 0.0 3 8.1 0.0 3.8 2 1 1 3 3 3 1 Bacterial transcriptional activator domain TPR_5 PF12688.2 gi|407465063|ref|YP_006775945.1| - 0.0022 18.0 0.1 3.5 7.7 0.0 4.0 1 1 3 4 4 4 1 Tetratrico peptide repeat RPN7 PF10602.4 gi|407465063|ref|YP_006775945.1| - 0.0035 16.7 0.7 0.46 9.8 0.0 3.4 1 1 3 4 4 4 1 26S proteasome subunit RPN7 Alkyl_sulf_dimr PF14863.1 gi|407465063|ref|YP_006775945.1| - 0.0058 16.8 0.7 2.2 8.5 0.1 3.3 2 1 2 4 4 4 1 Alkyl sulfatase dimerisation FAT PF02259.18 gi|407465063|ref|YP_006775945.1| - 0.019 13.9 2.7 1.8 7.4 0.4 2.7 1 1 0 2 2 2 0 FAT domain PPR_2 PF13041.1 gi|407465063|ref|YP_006775945.1| - 0.021 14.8 3.9 6.7 6.7 0.1 4.2 4 0 0 4 4 4 0 PPR repeat family Lsm_interact PF05391.6 gi|407465063|ref|YP_006775945.1| - 0.052 13.0 0.0 0.12 11.8 0.0 1.6 1 0 0 1 1 1 0 Lsm interaction motif PMC2NT PF08066.7 gi|407465063|ref|YP_006775945.1| - 0.086 13.1 0.3 3.6 7.9 0.0 2.4 2 0 0 2 2 2 0 PMC2NT (NUC016) domain Apc5 PF12862.2 gi|407465063|ref|YP_006775945.1| - 0.13 12.1 0.7 4.8 7.1 0.1 3.1 1 1 1 3 3 3 0 Anaphase-promoting complex subunit 5 Clathrin PF00637.15 gi|407465063|ref|YP_006775945.1| - 0.43 10.1 6.2 18 4.9 2.5 3.7 1 1 1 2 2 2 0 Region in Clathrin and VPS Toprim_Crpt PF13342.1 gi|407465064|ref|YP_006775946.1| - 0.02 14.4 0.1 0.02 14.4 0.1 2.0 2 0 0 2 2 2 0 C-terminal repeat of topoisomerase DUF603 PF04645.7 gi|407465064|ref|YP_006775946.1| - 0.033 14.1 0.2 0.033 14.1 0.1 1.7 2 1 0 2 2 2 0 Protein of unknown function, DUF603 COX14 PF14880.1 gi|407465064|ref|YP_006775946.1| - 0.057 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Cytochrome oxidase c assembly SHOCT PF09851.4 gi|407465065|ref|YP_006775947.1| - 2.9e-08 32.8 2.9 1e-07 31.1 2.0 2.0 1 0 0 1 1 1 1 Short C-terminal domain DUF3359 PF11839.3 gi|407465065|ref|YP_006775947.1| - 0.1 12.9 6.8 0.064 13.6 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3359) Serine_rich PF08824.5 gi|407465065|ref|YP_006775947.1| - 0.13 11.9 1.3 0.17 11.5 0.7 1.4 1 1 0 1 1 1 0 Serine rich protein interaction domain GvpG PF05120.7 gi|407465065|ref|YP_006775947.1| - 0.16 11.8 1.7 0.19 11.5 0.1 1.8 1 1 1 2 2 2 0 Gas vesicle protein G ATP-synt_B PF00430.13 gi|407465065|ref|YP_006775947.1| - 0.6 9.9 13.5 0.56 10.0 8.4 1.7 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) DUF2052 PF09747.4 gi|407465065|ref|YP_006775947.1| - 0.78 9.6 4.4 0.9 9.4 3.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Cupin_2 PF07883.6 gi|407465066|ref|YP_006775948.1| - 3.4e-06 26.4 0.7 2.4e-05 23.7 0.5 2.0 1 1 0 1 1 1 1 Cupin domain Auxin_BP PF02041.11 gi|407465066|ref|YP_006775948.1| - 2.6e-05 23.7 0.1 3.1e-05 23.4 0.1 1.1 1 0 0 1 1 1 1 Auxin binding protein Cupin_1 PF00190.17 gi|407465066|ref|YP_006775948.1| - 8.4e-05 22.0 0.0 9.9e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_8 PF13621.1 gi|407465066|ref|YP_006775948.1| - 0.0011 18.5 0.1 0.014 14.8 0.0 2.0 1 1 1 2 2 2 1 Cupin-like domain DUF4320 PF14208.1 gi|407465066|ref|YP_006775948.1| - 0.052 13.4 1.4 0.057 13.3 0.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4320) DTHCT PF08070.6 gi|407465066|ref|YP_006775948.1| - 2.1 9.0 6.1 1.8 9.2 0.1 2.7 2 1 0 2 2 2 0 DTHCT (NUC029) region Cupin_2 PF07883.6 gi|407465067|ref|YP_006775949.1| - 2.4e-15 55.7 0.0 4.8e-15 54.8 0.0 1.5 2 0 0 2 2 2 1 Cupin domain MannoseP_isomer PF01050.13 gi|407465067|ref|YP_006775949.1| - 2.5e-09 36.9 0.0 2.8e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_1 PF00190.17 gi|407465067|ref|YP_006775949.1| - 5.8e-07 29.0 0.0 7.5e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.14 gi|407465067|ref|YP_006775949.1| - 3.5e-05 23.5 0.0 4.8e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Ectoine_synth PF06339.7 gi|407465067|ref|YP_006775949.1| - 4.1e-05 23.5 0.0 4.6e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Ectoine synthase Cupin_3 PF05899.7 gi|407465067|ref|YP_006775949.1| - 0.00012 21.3 0.0 0.00018 20.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) EutQ PF06249.7 gi|407465067|ref|YP_006775949.1| - 0.00019 21.0 0.0 0.00028 20.4 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ CENP-C_C PF11699.3 gi|407465067|ref|YP_006775949.1| - 0.0015 18.4 0.0 0.0021 18.0 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like GPI PF06560.6 gi|407465067|ref|YP_006775949.1| - 0.0016 17.5 0.0 0.0032 16.5 0.0 1.5 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Cupin_5 PF06172.6 gi|407465067|ref|YP_006775949.1| - 0.0042 16.9 0.0 0.011 15.6 0.0 1.6 1 1 1 2 2 2 1 Cupin superfamily (DUF985) Auxin_BP PF02041.11 gi|407465067|ref|YP_006775949.1| - 0.086 12.2 0.0 0.11 11.9 0.0 1.3 1 1 0 1 1 1 0 Auxin binding protein DnaJ PF00226.26 gi|407465068|ref|YP_006775950.1| - 1.2e-17 63.3 0.8 3e-17 62.1 0.6 1.6 1 0 0 1 1 1 1 DnaJ domain Fer4_15 PF13459.1 gi|407465068|ref|YP_006775950.1| - 3e-12 46.9 1.3 7.5e-12 45.6 0.9 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|407465068|ref|YP_006775950.1| - 1.3e-11 44.7 2.1 3.3e-11 43.4 1.5 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_19 PF06902.6 gi|407465068|ref|YP_006775950.1| - 0.00017 21.3 2.0 0.00043 20.0 1.4 1.7 1 1 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4_7 PF12838.2 gi|407465068|ref|YP_006775950.1| - 0.0081 16.5 1.3 0.54 10.6 0.2 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain RPT PF13446.1 gi|407465068|ref|YP_006775950.1| - 0.017 14.5 0.0 0.046 13.1 0.0 1.7 2 0 0 2 2 2 0 A repeated domain in UCH-protein Fer4 PF00037.22 gi|407465068|ref|YP_006775950.1| - 0.036 13.6 8.7 0.4 10.3 3.6 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain NUMOD1 PF07453.8 gi|407465068|ref|YP_006775950.1| - 0.055 13.3 0.6 1.1 9.2 0.0 2.7 2 0 0 2 2 2 0 NUMOD1 domain Fer4_18 PF13746.1 gi|407465068|ref|YP_006775950.1| - 0.11 12.8 0.1 0.11 12.8 0.1 2.6 3 1 0 3 3 3 0 4Fe-4S dicluster domain HIT PF01230.18 gi|407465069|ref|YP_006775951.1| - 7.5e-23 80.9 1.0 1e-22 80.5 0.7 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.3 gi|407465069|ref|YP_006775951.1| - 1.7e-12 47.6 1.1 2.1e-12 47.2 0.6 1.2 1 1 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.10 gi|407465069|ref|YP_006775951.1| - 0.00049 19.7 0.4 0.0006 19.4 0.3 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 Cas_NE0113 PF09623.5 gi|407465069|ref|YP_006775951.1| - 0.013 14.9 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) GalP_UDP_tr_C PF02744.12 gi|407465069|ref|YP_006775951.1| - 0.013 15.0 0.3 0.016 14.7 0.2 1.3 1 1 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain Microcin PF03526.8 gi|407465070|ref|YP_006775952.1| - 0.13 11.9 0.0 0.23 11.0 0.0 1.4 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein zf-BED PF02892.10 gi|407465071|ref|YP_006775953.1| - 0.00049 19.7 1.5 0.00073 19.2 1.0 1.3 1 0 0 1 1 1 1 BED zinc finger zf-C2H2 PF00096.21 gi|407465071|ref|YP_006775953.1| - 0.0032 17.7 1.0 0.0055 16.9 0.7 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_2 PF12756.2 gi|407465071|ref|YP_006775953.1| - 0.0033 17.5 0.3 0.0035 17.4 0.2 1.1 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) DUF4553 PF15090.1 gi|407465071|ref|YP_006775953.1| - 0.0094 14.9 0.3 0.01 14.8 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4553) Rad50_zn_hook PF04423.9 gi|407465071|ref|YP_006775953.1| - 0.016 14.6 1.3 0.021 14.3 0.9 1.1 1 0 0 1 1 1 0 Rad50 zinc hook motif zf-C2H2_4 PF13894.1 gi|407465071|ref|YP_006775953.1| - 0.028 14.7 0.3 0.041 14.2 0.2 1.3 1 0 0 1 1 1 0 C2H2-type zinc finger DUF1644 PF07800.7 gi|407465071|ref|YP_006775953.1| - 0.21 11.4 1.3 0.36 10.6 0.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1644) zf-H2C2_5 PF13909.1 gi|407465071|ref|YP_006775953.1| - 0.72 10.2 4.2 2.5 8.5 2.9 1.8 1 1 0 1 1 1 0 C2H2-type zinc-finger domain FMN_red PF03358.10 gi|407465072|ref|YP_006775954.1| - 1.3e-38 131.8 0.0 1.7e-38 131.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|407465072|ref|YP_006775954.1| - 2.1e-09 37.1 0.0 2.6e-09 36.9 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Lactonase PF10282.4 gi|407465073|ref|YP_006775955.1| - 7.4e-14 51.5 0.2 8.1e-11 41.5 0.0 2.2 2 0 0 2 2 2 2 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|407465073|ref|YP_006775955.1| - 8.1e-10 37.5 3.5 4.4e-05 21.9 0.2 2.9 1 1 2 3 3 3 3 Cytochrome D1 heme domain DUF4221 PF13970.1 gi|407465073|ref|YP_006775955.1| - 3.9e-08 33.0 6.0 0.051 12.8 0.1 4.4 1 1 2 5 5 5 3 Domain of unknown function (DUF4221) PQQ_2 PF13360.1 gi|407465073|ref|YP_006775955.1| - 0.0021 17.5 0.0 0.064 12.7 0.0 2.4 1 1 0 2 2 2 1 PQQ-like domain DUF1513 PF07433.6 gi|407465073|ref|YP_006775955.1| - 0.026 13.4 0.5 11 4.8 0.0 3.5 2 1 2 4 4 4 0 Protein of unknown function (DUF1513) LVIVD PF08309.6 gi|407465073|ref|YP_006775955.1| - 0.14 11.1 5.5 2.1 7.4 0.1 3.2 3 0 0 3 3 3 0 LVIVD repeat FlaG PF03646.10 gi|407465073|ref|YP_006775955.1| - 0.67 10.1 5.9 6 7.0 0.0 2.9 3 0 0 3 3 3 0 FlaG protein 3HCDH_N PF02737.13 gi|407465074|ref|YP_006775956.1| - 6.7e-65 218.1 2.0 7.4e-65 217.9 0.3 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.17 gi|407465074|ref|YP_006775956.1| - 5.6e-35 119.6 0.1 5.6e-25 87.5 0.0 3.0 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.18 gi|407465074|ref|YP_006775956.1| - 1.6e-06 27.9 0.4 3.2e-06 26.9 0.3 1.6 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 gi|407465074|ref|YP_006775956.1| - 5e-06 26.4 0.0 1e-05 25.4 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|407465074|ref|YP_006775956.1| - 0.00029 21.2 0.2 0.00099 19.4 0.1 2.0 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.9 gi|407465074|ref|YP_006775956.1| - 0.023 14.0 0.2 0.043 13.1 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF4078 PF13300.1 gi|407465074|ref|YP_006775956.1| - 0.043 13.9 0.0 0.075 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4078) IlvN PF07991.7 gi|407465074|ref|YP_006775956.1| - 0.43 9.9 3.0 21 4.4 2.1 2.4 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain Lysine_decarbox PF03641.9 gi|407465075|ref|YP_006775957.1| - 6.3e-08 32.5 0.1 1.3e-07 31.4 0.1 1.5 1 1 0 1 1 1 1 Possible lysine decarboxylase DNA_processg_A PF02481.10 gi|407465075|ref|YP_006775957.1| - 0.00065 18.6 0.8 0.0096 14.8 0.6 2.1 2 0 0 2 2 2 1 DNA recombination-mediator protein A MoCo_carrier PF12694.2 gi|407465075|ref|YP_006775957.1| - 0.0019 17.6 0.1 0.003 16.9 0.1 1.3 1 0 0 1 1 1 1 Putative molybdenum carrier DAGK_cat PF00781.19 gi|407465075|ref|YP_006775957.1| - 0.0073 15.7 2.1 0.55 9.6 0.0 2.2 2 0 0 2 2 2 2 Diacylglycerol kinase catalytic domain Nuc_deoxyrib_tr PF05014.10 gi|407465075|ref|YP_006775957.1| - 0.11 12.3 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase zf-C4pol PF14260.1 gi|407465076|ref|YP_006775958.1| - 0.0012 18.8 11.5 0.051 13.5 0.6 3.4 2 1 2 4 4 4 2 C4-type zinc-finger of DNA polymerase delta FYVE PF01363.16 gi|407465076|ref|YP_006775958.1| - 0.0034 17.2 13.5 0.16 11.8 4.1 2.8 1 1 1 2 2 2 2 FYVE zinc finger zf-CHY PF05495.7 gi|407465076|ref|YP_006775958.1| - 0.0093 16.1 18.4 0.31 11.2 3.6 3.1 1 1 4 5 5 5 4 CHY zinc finger DUF4428 PF14471.1 gi|407465076|ref|YP_006775958.1| - 0.023 14.4 19.1 0.15 11.8 1.1 4.3 4 1 0 4 4 4 0 Domain of unknown function (DUF4428) Ribosomal_S14 PF00253.16 gi|407465076|ref|YP_006775958.1| - 0.025 13.9 6.9 2.6 7.4 1.2 3.5 3 1 1 4 4 4 0 Ribosomal protein S14p/S29e Cytochrome_C7 PF14522.1 gi|407465076|ref|YP_006775958.1| - 0.21 11.2 18.3 0.11 12.0 3.2 3.0 1 1 1 3 3 3 0 Cytochrome c7 C1_1 PF00130.17 gi|407465076|ref|YP_006775958.1| - 1 9.1 19.6 0.16 11.7 1.5 3.3 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Cytochrom_c3_2 PF14537.1 gi|407465076|ref|YP_006775958.1| - 3 8.2 17.0 37 4.7 10.2 3.1 1 1 1 2 2 2 0 Cytochrome c3 LIM PF00412.17 gi|407465076|ref|YP_006775958.1| - 3.6 7.7 15.8 0.4 10.7 1.0 3.3 2 1 0 3 3 3 0 LIM domain zf-TFIIIC PF12660.2 gi|407465076|ref|YP_006775958.1| - 5.3 7.0 7.6 2.2 8.2 1.4 2.4 1 1 2 3 3 3 0 Putative zinc-finger of transcription factor IIIC complex PHF5 PF03660.9 gi|407465076|ref|YP_006775958.1| - 5.7 7.0 9.1 5.4 7.1 3.6 2.5 1 1 1 2 2 2 0 PHF5-like protein zf-C2H2_4 PF13894.1 gi|407465077|ref|YP_006775959.1| - 2.5e-09 36.7 3.3 0.00024 21.2 0.5 2.1 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2 PF00096.21 gi|407465077|ref|YP_006775959.1| - 2.5e-09 36.8 7.4 0.00051 20.2 0.2 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.3 gi|407465077|ref|YP_006775959.1| - 6.8e-09 35.6 9.8 7.9e-05 22.6 0.7 2.3 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.2 gi|407465077|ref|YP_006775959.1| - 3.3e-07 30.2 4.8 0.00046 20.2 0.2 2.2 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-H2C2_2 PF13465.1 gi|407465077|ref|YP_006775959.1| - 2.7e-05 24.2 13.9 0.0013 18.8 0.3 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.1 gi|407465077|ref|YP_006775959.1| - 4.8e-05 23.3 9.5 0.0028 17.8 1.1 2.3 2 1 0 2 2 2 2 C2H2-type zinc-finger domain zf-C2H2_6 PF13912.1 gi|407465077|ref|YP_006775959.1| - 0.00016 21.4 6.5 0.0096 15.7 0.3 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger DUF629 PF04780.7 gi|407465077|ref|YP_006775959.1| - 0.00048 18.7 8.5 0.013 14.1 0.9 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF629) zf-C2H2_2 PF12756.2 gi|407465077|ref|YP_006775959.1| - 0.00081 19.4 9.4 0.056 13.5 1.6 2.0 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-Di19 PF05605.7 gi|407465077|ref|YP_006775959.1| - 0.0017 18.4 4.0 0.0025 17.9 2.8 1.3 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-BED PF02892.10 gi|407465077|ref|YP_006775959.1| - 0.005 16.5 9.9 0.22 11.3 2.5 2.3 1 1 1 2 2 2 2 BED zinc finger zf-FCS PF06467.9 gi|407465077|ref|YP_006775959.1| - 0.009 15.6 3.8 0.41 10.3 0.2 2.1 2 0 0 2 2 2 1 MYM-type Zinc finger with FCS sequence motif Prok-RING_1 PF14446.1 gi|407465077|ref|YP_006775959.1| - 0.0091 15.7 4.3 0.24 11.1 0.3 2.1 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 C1_4 PF07975.7 gi|407465077|ref|YP_006775959.1| - 0.0095 15.9 2.1 0.014 15.3 1.5 1.4 1 0 0 1 1 1 1 TFIIH C1-like domain PyrI_C PF02748.10 gi|407465077|ref|YP_006775959.1| - 0.0098 15.3 7.0 0.098 12.1 0.8 2.2 1 1 1 2 2 2 2 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF2197 PF09963.4 gi|407465077|ref|YP_006775959.1| - 0.014 15.2 5.1 0.017 15.0 3.5 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) zf-C2HC_2 PF13913.1 gi|407465077|ref|YP_006775959.1| - 0.024 14.2 0.1 0.024 14.2 0.1 1.9 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Endonuclease_7 PF02945.10 gi|407465077|ref|YP_006775959.1| - 0.04 13.6 1.5 0.048 13.3 1.1 1.2 1 0 0 1 1 1 0 Recombination endonuclease VII Cor1 PF04803.7 gi|407465077|ref|YP_006775959.1| - 0.094 12.4 4.2 0.1 12.3 2.9 1.1 1 0 0 1 1 1 0 Cor1/Xlr/Xmr conserved region DUF1644 PF07800.7 gi|407465077|ref|YP_006775959.1| - 0.11 12.4 3.3 0.11 12.4 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) C1_2 PF03107.11 gi|407465077|ref|YP_006775959.1| - 0.11 12.6 4.9 3.7 7.7 0.2 2.2 2 0 0 2 2 2 0 C1 domain NinG PF05766.7 gi|407465077|ref|YP_006775959.1| - 0.23 11.1 5.6 2.7 7.6 0.2 2.0 1 1 1 2 2 2 0 Bacteriophage Lambda NinG protein zf-CHY PF05495.7 gi|407465077|ref|YP_006775959.1| - 0.28 11.3 4.6 0.34 11.1 2.9 1.4 1 1 0 1 1 1 0 CHY zinc finger Zn-ribbon_8 PF09723.5 gi|407465077|ref|YP_006775959.1| - 0.38 10.7 5.7 0.56 10.1 0.7 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zinc-ribbons_6 PF07191.7 gi|407465077|ref|YP_006775959.1| - 0.44 10.3 4.4 15 5.4 2.9 2.1 1 1 0 1 1 1 0 zinc-ribbons SAE2 PF08573.5 gi|407465077|ref|YP_006775959.1| - 0.56 10.9 5.0 0.39 11.4 0.9 2.0 1 1 1 2 2 2 0 DNA repair protein endonuclease SAE2/CtIP C-terminus Evr1_Alr PF04777.8 gi|407465077|ref|YP_006775959.1| - 0.71 9.8 5.6 1.8 8.5 0.8 2.0 1 1 1 2 2 2 0 Erv1 / Alr family ARD PF03079.9 gi|407465077|ref|YP_006775959.1| - 0.71 9.7 3.6 0.78 9.6 2.5 1.1 1 0 0 1 1 1 0 ARD/ARD' family FYVE PF01363.16 gi|407465077|ref|YP_006775959.1| - 0.92 9.4 4.9 6.6 6.7 0.4 2.1 1 1 0 2 2 2 0 FYVE zinc finger zf-DBF PF07535.7 gi|407465077|ref|YP_006775959.1| - 1.1 9.0 6.6 1.4 8.6 0.3 2.1 2 0 0 2 2 2 0 DBF zinc finger zf-AN1 PF01428.11 gi|407465077|ref|YP_006775959.1| - 1.1 9.1 7.8 2.8 7.8 0.1 2.4 3 0 0 3 3 2 0 AN1-like Zinc finger Ribosomal_L44 PF00935.14 gi|407465077|ref|YP_006775959.1| - 3.1 7.8 7.8 6.2 6.8 0.5 2.2 1 1 1 2 2 2 0 Ribosomal protein L44 zinc_ribbon_4 PF13717.1 gi|407465077|ref|YP_006775959.1| - 3.4 7.4 6.2 92 2.8 4.3 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407465077|ref|YP_006775959.1| - 3.7 7.2 6.1 1e+02 2.6 4.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain XPA_N PF01286.13 gi|407465077|ref|YP_006775959.1| - 5.7 6.7 8.0 6.3 6.5 1.1 2.3 2 0 0 2 2 2 0 XPA protein N-terminal DNA_RNApol_7kD PF03604.8 gi|407465078|ref|YP_006775960.1| - 2.7e-05 23.5 1.2 4.5e-05 22.8 0.8 1.4 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf-HIT PF04438.11 gi|407465078|ref|YP_006775960.1| - 0.2 11.3 1.1 0.58 9.8 0.1 1.9 2 0 0 2 2 2 0 HIT zinc finger Ribosomal_S10 PF00338.17 gi|407465079|ref|YP_006775961.1| - 2.2e-25 88.3 0.0 2.4e-25 88.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.22 gi|407465080|ref|YP_006775962.1| - 1.2e-48 165.0 0.1 1.6e-48 164.6 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.12 gi|407465080|ref|YP_006775962.1| - 2.9e-31 107.5 0.5 9.4e-31 105.9 0.2 2.0 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.20 gi|407465080|ref|YP_006775962.1| - 3.7e-17 62.2 1.0 1.1e-16 60.7 0.7 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.1 gi|407465080|ref|YP_006775962.1| - 8e-08 31.8 0.5 1.7e-07 30.7 0.4 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 4 MMR_HSR1 PF01926.18 gi|407465080|ref|YP_006775962.1| - 0.0047 16.8 0.0 0.013 15.4 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase NIF3 PF01784.13 gi|407465080|ref|YP_006775962.1| - 0.097 12.2 0.1 0.23 10.9 0.1 1.7 1 0 0 1 1 1 0 NIF3 (NGG1p interacting factor 3) FBPase_3 PF01950.11 gi|407465081|ref|YP_006775963.1| - 4.7e-159 529.2 0.2 5.4e-159 529.0 0.1 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase DUF1989 PF09347.5 gi|407465081|ref|YP_006775963.1| - 0.026 13.9 0.0 0.046 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) MFS_1 PF07690.11 gi|407465082|ref|YP_006775964.1| - 0.002 16.9 1.9 0.0022 16.7 1.3 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3487 PF11990.3 gi|407465082|ref|YP_006775964.1| - 0.029 13.7 0.1 0.04 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) MFS_3 PF05977.8 gi|407465082|ref|YP_006775964.1| - 0.035 12.2 0.0 0.038 12.0 0.0 1.0 1 0 0 1 1 1 0 Transmembrane secretion effector DNA_ligase_A_M PF01068.16 gi|407465083|ref|YP_006775965.1| - 1.7e-56 190.7 2.7 3.6e-56 189.7 1.8 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.9 gi|407465083|ref|YP_006775965.1| - 4.5e-50 169.9 1.0 8.9e-50 168.9 0.7 1.5 1 0 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.10 gi|407465083|ref|YP_006775965.1| - 9.9e-22 77.1 0.0 2.8e-21 75.7 0.0 1.8 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region PhoU_div PF01865.11 gi|407465084|ref|YP_006775966.1| - 5.7e-19 68.1 11.9 6.7e-19 67.9 8.3 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 LXG PF04740.7 gi|407465084|ref|YP_006775966.1| - 0.026 14.3 7.3 0.13 12.0 0.2 2.5 2 1 1 3 3 3 0 LXG domain of WXG superfamily DUF458 PF04308.7 gi|407465084|ref|YP_006775966.1| - 0.073 12.7 5.3 0.16 11.6 1.1 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF458) ISAV_HA PF06215.6 gi|407465084|ref|YP_006775966.1| - 0.11 10.8 0.1 0.16 10.2 0.0 1.3 1 0 0 1 1 1 0 Infectious salmon anaemia virus haemagglutinin DUF677 PF05055.7 gi|407465084|ref|YP_006775966.1| - 0.11 11.1 8.0 0.021 13.5 1.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF677) PhoU PF01895.14 gi|407465084|ref|YP_006775966.1| - 0.13 12.6 14.9 0.33 11.4 2.8 3.1 2 2 2 4 4 4 0 PhoU domain Reo_sigmaC PF04582.7 gi|407465084|ref|YP_006775966.1| - 0.38 9.8 4.7 0.76 8.8 1.3 1.9 1 1 2 3 3 3 0 Reovirus sigma C capsid protein BBP1_C PF15272.1 gi|407465084|ref|YP_006775966.1| - 0.95 8.9 7.0 1.5 8.3 1.7 2.2 2 0 0 2 2 2 0 Spindle pole body component BBP1, C-terminal MCPsignal PF00015.16 gi|407465084|ref|YP_006775966.1| - 1.1 8.8 11.5 17 4.8 6.9 2.7 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain tRNA_int_endo PF01974.12 gi|407465085|ref|YP_006775967.1| - 6.6e-28 96.3 0.0 1.1e-27 95.6 0.0 1.3 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.9 gi|407465085|ref|YP_006775967.1| - 7e-20 70.3 0.0 1.5e-19 69.3 0.0 1.6 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain Ribosomal_L22e PF01776.12 gi|407465085|ref|YP_006775967.1| - 0.02 14.8 0.7 0.031 14.2 0.5 1.3 1 0 0 1 1 1 0 Ribosomal L22e protein family adh_short PF00106.20 gi|407465088|ref|YP_006775970.1| - 4.8e-28 98.1 0.0 5.1e-22 78.5 0.0 2.6 2 1 0 2 2 2 2 short chain dehydrogenase KR PF08659.5 gi|407465088|ref|YP_006775970.1| - 3e-17 62.8 0.0 3.3e-11 43.1 0.0 2.6 2 1 0 2 2 2 2 KR domain adh_short_C2 PF13561.1 gi|407465088|ref|YP_006775970.1| - 1.2e-13 51.4 0.3 2.9e-09 37.0 0.0 3.1 4 0 0 4 4 4 2 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.16 gi|407465088|ref|YP_006775970.1| - 9.6e-05 21.9 0.0 0.0036 16.7 0.0 2.5 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.12 gi|407465088|ref|YP_006775970.1| - 0.0058 17.0 2.2 0.0067 16.8 0.2 2.2 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.15 gi|407465088|ref|YP_006775970.1| - 0.033 14.3 0.4 0.24 11.4 0.1 2.3 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Polysacc_synt_2 PF02719.10 gi|407465088|ref|YP_006775970.1| - 0.051 12.4 0.2 0.11 11.3 0.1 1.6 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein 3HCDH_N PF02737.13 gi|407465088|ref|YP_006775970.1| - 0.18 11.4 2.1 0.17 11.5 0.1 1.8 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RepA_N PF06970.6 gi|407465089|ref|YP_006775971.1| - 0.21 11.3 1.4 0.46 10.3 0.3 1.9 2 0 0 2 2 2 0 Replication initiator protein A (RepA) N-terminus TauE PF01925.14 gi|407465090|ref|YP_006775972.1| - 1.2e-50 172.2 33.4 1.5e-50 171.9 23.1 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF2198 PF09964.4 gi|407465090|ref|YP_006775972.1| - 0.36 10.6 4.6 13 5.6 0.6 3.1 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2198) DUF1435 PF07256.7 gi|407465090|ref|YP_006775972.1| - 1.7 8.7 7.4 1.5 8.8 0.1 3.0 4 0 0 4 4 4 0 Protein of unknown function (DUF1435) 7TM-7TMR_HD PF07698.6 gi|407465090|ref|YP_006775972.1| - 7.8 5.8 26.9 7.1 6.0 6.5 2.6 1 1 1 2 2 2 0 7TM receptor with intracellular HD hydrolase DUF1614 PF07758.6 gi|407465091|ref|YP_006775973.1| - 0.042 13.5 0.3 0.18 11.4 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1614) DUF192 PF02643.10 gi|407465092|ref|YP_006775974.1| - 3e-30 104.0 0.0 4e-30 103.6 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 Fe_dep_repress PF01325.14 gi|407465094|ref|YP_006775976.1| - 2.9e-19 68.7 0.4 4.8e-19 68.0 0.3 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.10 gi|407465094|ref|YP_006775976.1| - 9.9e-15 53.9 0.0 1.9e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_27 PF13463.1 gi|407465094|ref|YP_006775976.1| - 4e-05 23.8 0.0 0.00015 21.9 0.0 2.0 2 1 0 2 2 2 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|407465094|ref|YP_006775976.1| - 4.3e-05 23.1 0.1 7.7e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|407465094|ref|YP_006775976.1| - 7.9e-05 21.9 0.0 0.00021 20.5 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|407465094|ref|YP_006775976.1| - 0.00016 21.3 0.0 0.00043 19.9 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_12 PF08461.5 gi|407465094|ref|YP_006775976.1| - 0.00016 21.3 0.1 0.00036 20.2 0.0 1.7 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain DUF4423 PF14394.1 gi|407465094|ref|YP_006775976.1| - 0.00018 21.1 0.0 0.00082 18.9 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4423) HTH_45 PF14947.1 gi|407465094|ref|YP_006775976.1| - 0.00021 21.0 1.6 0.00035 20.3 0.4 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix MarR_2 PF12802.2 gi|407465094|ref|YP_006775976.1| - 0.00032 20.3 0.0 0.00054 19.5 0.0 1.3 1 0 0 1 1 1 1 MarR family LexA_DNA_bind PF01726.11 gi|407465094|ref|YP_006775976.1| - 0.0013 18.2 0.0 0.004 16.6 0.0 1.8 2 0 0 2 2 2 1 LexA DNA binding domain DUF2250 PF10007.4 gi|407465094|ref|YP_006775976.1| - 0.0014 18.4 0.0 0.0027 17.5 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_28 PF13518.1 gi|407465094|ref|YP_006775976.1| - 0.0074 16.2 0.0 0.15 12.1 0.0 2.7 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_6 PF01418.12 gi|407465094|ref|YP_006775976.1| - 0.017 14.8 0.0 0.041 13.6 0.0 1.8 2 1 0 2 2 2 0 Helix-turn-helix domain, rpiR family HTH_Crp_2 PF13545.1 gi|407465094|ref|YP_006775976.1| - 0.018 14.7 0.0 0.033 13.9 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_5 PF01022.15 gi|407465094|ref|YP_006775976.1| - 0.025 14.2 0.2 0.055 13.1 0.0 1.7 2 0 0 2 2 1 0 Bacterial regulatory protein, arsR family FeoC PF09012.5 gi|407465094|ref|YP_006775976.1| - 0.04 13.6 0.0 0.075 12.7 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_IclR PF09339.5 gi|407465094|ref|YP_006775976.1| - 0.056 13.0 0.2 0.11 12.1 0.0 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain PAX PF00292.13 gi|407465094|ref|YP_006775976.1| - 0.058 13.1 0.0 0.087 12.5 0.0 1.3 1 0 0 1 1 1 0 'Paired box' domain Rrf2 PF02082.15 gi|407465094|ref|YP_006775976.1| - 0.061 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_Tnp_ISL3 PF13542.1 gi|407465094|ref|YP_006775976.1| - 0.14 11.3 0.0 0.62 9.2 0.0 2.1 2 1 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 T2SE PF00437.15 gi|407465095|ref|YP_006775977.1| - 2.2e-12 46.4 0.0 3.8e-12 45.6 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.24 gi|407465095|ref|YP_006775977.1| - 8.1e-10 38.1 1.8 2.1e-09 36.9 0.2 2.5 2 0 0 2 2 2 1 KH domain KH_5 PF13184.1 gi|407465095|ref|YP_006775977.1| - 2.3e-07 30.4 0.5 1e-06 28.4 0.3 2.2 1 0 0 1 1 1 1 NusA-like KH domain KH_3 PF13014.1 gi|407465095|ref|YP_006775977.1| - 1.1e-06 28.1 0.2 1.1e-06 28.1 0.2 2.5 2 0 0 2 2 1 1 KH domain KH_2 PF07650.12 gi|407465095|ref|YP_006775977.1| - 1.2e-06 27.9 0.2 1.2e-06 27.9 0.2 2.2 3 0 0 3 3 1 1 KH domain AAA_14 PF13173.1 gi|407465095|ref|YP_006775977.1| - 2e-06 27.7 0.1 0.0002 21.2 0.0 3.1 2 1 1 3 3 3 1 AAA domain PIN_4 PF13638.1 gi|407465095|ref|YP_006775977.1| - 2.3e-05 24.4 0.1 9.6e-05 22.5 0.1 2.1 1 1 0 1 1 1 1 PIN domain AAA_17 PF13207.1 gi|407465095|ref|YP_006775977.1| - 0.00013 22.8 0.0 0.00057 20.6 0.0 2.1 2 0 0 2 2 1 1 AAA domain PIN PF01850.16 gi|407465095|ref|YP_006775977.1| - 0.00032 21.0 0.0 0.0013 19.0 0.0 2.1 1 1 0 1 1 1 1 PIN domain AAA_18 PF13238.1 gi|407465095|ref|YP_006775977.1| - 0.00043 20.5 0.0 0.0018 18.5 0.0 2.1 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|407465095|ref|YP_006775977.1| - 0.0013 18.9 0.1 0.025 14.7 0.0 2.6 3 0 0 3 3 2 1 AAA domain ArgK PF03308.11 gi|407465095|ref|YP_006775977.1| - 0.0023 16.7 0.0 0.0043 15.8 0.0 1.4 1 0 0 1 1 1 1 ArgK protein AAA_28 PF13521.1 gi|407465095|ref|YP_006775977.1| - 0.0024 17.8 0.0 0.0042 17.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|407465095|ref|YP_006775977.1| - 0.0026 17.4 0.0 0.0054 16.4 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain AAA_16 PF13191.1 gi|407465095|ref|YP_006775977.1| - 0.0036 17.2 0.0 0.0074 16.2 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.12 gi|407465095|ref|YP_006775977.1| - 0.0072 15.7 0.0 0.016 14.6 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein ABC_tran PF00005.22 gi|407465095|ref|YP_006775977.1| - 0.0074 16.5 0.0 0.027 14.7 0.0 2.0 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.1 gi|407465095|ref|YP_006775977.1| - 0.018 14.5 0.1 0.051 13.1 0.1 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|407465095|ref|YP_006775977.1| - 0.018 14.4 0.0 0.045 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.13 gi|407465095|ref|YP_006775977.1| - 0.024 14.1 0.0 0.046 13.2 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NB-ARC PF00931.17 gi|407465095|ref|YP_006775977.1| - 0.024 13.4 0.0 0.07 11.9 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain KTI12 PF08433.5 gi|407465095|ref|YP_006775977.1| - 0.035 13.3 0.0 0.072 12.2 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_33 PF13671.1 gi|407465095|ref|YP_006775977.1| - 0.039 13.8 0.2 0.092 12.6 0.2 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|407465095|ref|YP_006775977.1| - 0.042 13.4 0.0 0.089 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|407465095|ref|YP_006775977.1| - 0.057 12.8 0.1 0.17 11.3 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain Zeta_toxin PF06414.7 gi|407465095|ref|YP_006775977.1| - 0.081 12.0 0.1 0.17 10.9 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.7 gi|407465095|ref|YP_006775977.1| - 0.088 12.4 0.1 0.18 11.4 0.1 1.5 1 0 0 1 1 1 0 NACHT domain Sigma54_activ_2 PF14532.1 gi|407465095|ref|YP_006775977.1| - 0.12 12.4 0.0 0.32 11.0 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain Response_reg PF00072.19 gi|407465096|ref|YP_006775978.1| - 6.1e-24 84.1 1.6 6.9e-24 84.0 1.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CoA_binding_2 PF13380.1 gi|407465096|ref|YP_006775978.1| - 0.057 13.5 0.0 0.072 13.2 0.0 1.2 1 0 0 1 1 1 0 CoA binding domain Hpt PF01627.18 gi|407465097|ref|YP_006775979.1| - 0.0015 18.4 0.0 0.002 18.1 0.0 1.2 1 0 0 1 1 1 1 Hpt domain DUF4252 PF14060.1 gi|407465097|ref|YP_006775979.1| - 0.065 12.7 0.2 0.13 11.8 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4252) HATPase_c PF02518.21 gi|407465098|ref|YP_006775980.1| - 6e-30 103.2 0.1 1.3e-29 102.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|407465098|ref|YP_006775980.1| - 1.7e-15 56.7 5.5 1.2e-14 53.9 0.1 3.3 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.20 gi|407465098|ref|YP_006775980.1| - 3.1e-09 36.8 0.0 1.6e-08 34.5 0.0 2.3 2 0 0 2 2 2 1 HAMP domain HATPase_c_2 PF13581.1 gi|407465098|ref|YP_006775980.1| - 0.0067 16.2 0.0 0.015 15.0 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain KH_5 PF13184.1 gi|407465098|ref|YP_006775980.1| - 7 6.5 10.8 1.1 9.1 0.2 4.0 5 0 0 5 5 5 0 NusA-like KH domain PmbA_TldD PF01523.11 gi|407465099|ref|YP_006775981.1| - 1.6e-69 234.4 0.0 1.9e-69 234.1 0.0 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase fn1 PF00039.13 gi|407465099|ref|YP_006775981.1| - 0.068 12.9 0.3 0.14 12.0 0.2 1.5 1 0 0 1 1 1 0 Fibronectin type I domain UDG PF03167.14 gi|407465100|ref|YP_006775982.1| - 1.1e-36 125.6 0.0 1.3e-36 125.3 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Pur_DNA_glyco PF02245.11 gi|407465101|ref|YP_006775983.1| - 1.1e-64 217.0 0.1 1.2e-64 216.8 0.0 1.0 1 0 0 1 1 1 1 Methylpurine-DNA glycosylase (MPG) SNARE_assoc PF09335.6 gi|407465102|ref|YP_006775984.1| - 1.1e-16 61.1 1.2 1.1e-16 61.1 0.9 2.0 2 1 0 2 2 2 1 SNARE associated Golgi protein DUF1290 PF06947.7 gi|407465102|ref|YP_006775984.1| - 0.16 11.8 1.5 0.63 9.9 0.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1290) Cauli_DNA-bind PF03310.8 gi|407465104|ref|YP_006775986.1| - 0.044 13.6 3.9 0.055 13.3 2.4 1.4 1 1 0 1 1 1 0 Caulimovirus DNA-binding protein DUF4511 PF14974.1 gi|407465104|ref|YP_006775986.1| - 0.084 12.6 1.4 0.48 10.1 0.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4511) DUF2392 PF10288.4 gi|407465104|ref|YP_006775986.1| - 0.12 12.7 2.2 0.14 12.4 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2392) Med4 PF10018.4 gi|407465104|ref|YP_006775986.1| - 0.2 11.0 4.0 0.23 10.8 2.7 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF3835 PF12927.2 gi|407465104|ref|YP_006775986.1| - 3 8.8 6.8 1.9 9.5 2.5 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3835) OmpH PF03938.9 gi|407465104|ref|YP_006775986.1| - 3.3 7.6 7.1 5.9 6.8 4.9 1.5 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) ABC_tran PF00005.22 gi|407465105|ref|YP_006775987.1| - 5.7e-27 94.6 0.0 7.7e-27 94.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|407465105|ref|YP_006775987.1| - 4.1e-18 65.4 0.1 6.7e-18 64.8 0.1 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|407465105|ref|YP_006775987.1| - 7.5e-11 42.5 3.0 1.2e-09 38.5 0.3 2.2 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|407465105|ref|YP_006775987.1| - 0.00015 21.0 1.3 0.0022 17.2 1.5 2.0 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_18 PF13238.1 gi|407465105|ref|YP_006775987.1| - 0.0016 18.7 0.0 0.0033 17.7 0.0 1.6 2 0 0 2 2 2 1 AAA domain PRK PF00485.13 gi|407465105|ref|YP_006775987.1| - 0.02 14.4 0.0 0.028 13.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_10 PF12846.2 gi|407465105|ref|YP_006775987.1| - 0.025 14.0 0.2 0.41 10.0 0.0 2.2 2 0 0 2 2 2 0 AAA-like domain AAA_25 PF13481.1 gi|407465105|ref|YP_006775987.1| - 0.025 13.9 0.0 0.044 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.1 gi|407465105|ref|YP_006775987.1| - 0.074 12.0 1.1 0.14 11.1 0.3 1.7 1 1 1 2 2 2 0 AAA ATPase domain AAA_29 PF13555.1 gi|407465105|ref|YP_006775987.1| - 0.13 11.7 0.1 0.28 10.7 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_13 PF13166.1 gi|407465105|ref|YP_006775987.1| - 0.2 10.0 0.0 5.7 5.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain KH_5 PF13184.1 gi|407465106|ref|YP_006775988.1| - 1e-08 34.8 0.0 1.9e-08 33.9 0.0 1.5 1 0 0 1 1 1 1 NusA-like KH domain Cys_rich_KTR PF14205.1 gi|407465106|ref|YP_006775988.1| - 0.052 13.0 0.4 9.2 5.8 0.0 2.5 2 0 0 2 2 2 0 Cysteine-rich KTR Ribosomal_S2 PF00318.15 gi|407465106|ref|YP_006775988.1| - 0.068 12.3 0.5 0.16 11.1 0.1 1.6 1 1 0 2 2 2 0 Ribosomal protein S2 tRNA-synt_2 PF00152.15 gi|407465107|ref|YP_006775989.1| - 2.4e-90 302.7 0.1 4.4e-90 301.8 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|407465107|ref|YP_006775989.1| - 1.6e-11 43.8 1.3 3e-11 43.0 0.9 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|407465107|ref|YP_006775989.1| - 0.00057 19.1 0.2 0.11 11.6 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) E1-E2_ATPase PF00122.15 gi|407465109|ref|YP_006775991.1| - 0.00079 18.5 0.5 0.0009 18.3 0.4 1.0 1 0 0 1 1 1 1 E1-E2 ATPase COX1 PF00115.15 gi|407465109|ref|YP_006775991.1| - 0.027 13.1 0.1 0.028 13.0 0.1 1.2 1 0 0 1 1 1 0 Cytochrome C and Quinol oxidase polypeptide I DUF131 PF01998.12 gi|407465109|ref|YP_006775991.1| - 0.63 9.4 4.7 1.1 8.6 3.3 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF131 Fil_haemagg PF05594.9 gi|407465110|ref|YP_006775992.1| - 0.0023 18.1 20.5 0.071 13.4 4.0 3.8 1 1 1 2 2 2 2 Haemagluttinin repeat SnoaL_2 PF12680.2 gi|407465111|ref|YP_006775993.1| - 9.7e-12 45.1 0.0 1.1e-11 44.9 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.1 gi|407465111|ref|YP_006775993.1| - 2.3e-08 34.1 0.0 2.9e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL PF07366.7 gi|407465111|ref|YP_006775993.1| - 2.8e-05 23.7 0.2 0.00011 21.7 0.2 1.8 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase LEH PF07858.7 gi|407465111|ref|YP_006775993.1| - 0.00023 21.1 0.1 0.0011 18.9 0.1 1.9 1 1 0 1 1 1 1 Limonene-1,2-epoxide hydrolase catalytic domain SnoaL_3 PF13474.1 gi|407465111|ref|YP_006775993.1| - 0.041 13.9 0.1 0.064 13.2 0.1 1.6 1 1 0 1 1 1 0 SnoaL-like domain DUF2191 PF09957.4 gi|407465112|ref|YP_006775994.1| - 0.019 14.7 1.3 0.024 14.4 0.2 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2191) Iso_dh PF00180.15 gi|407465113|ref|YP_006775995.1| - 2.4e-100 335.8 0.4 2.7e-100 335.7 0.3 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase PdxA PF04166.7 gi|407465113|ref|YP_006775995.1| - 0.00069 18.9 0.0 0.0013 18.0 0.0 1.4 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA HMGL-like PF00682.14 gi|407465114|ref|YP_006775996.1| - 1e-75 254.4 0.7 1.9e-75 253.5 0.5 1.4 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|407465114|ref|YP_006775996.1| - 5.5e-29 100.6 1.3 1e-28 99.7 0.9 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain Glyco_hydro_97 PF10566.4 gi|407465114|ref|YP_006775996.1| - 0.00072 18.7 0.0 0.0012 17.9 0.0 1.3 1 0 0 1 1 1 1 Glycoside hydrolase 97 DUF4147 PF13660.1 gi|407465114|ref|YP_006775996.1| - 0.019 14.0 0.1 0.045 12.8 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4147) ALS_ss_C PF10369.4 gi|407465115|ref|YP_006775997.1| - 1.8e-25 88.4 0.2 4.2e-23 80.8 0.0 2.2 2 0 0 2 2 2 2 Small subunit of acetolactate synthase ACT_5 PF13710.1 gi|407465115|ref|YP_006775997.1| - 8.2e-17 60.7 0.0 1.6e-16 59.8 0.0 1.5 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|407465115|ref|YP_006775997.1| - 2.7e-13 49.0 0.0 4.9e-13 48.2 0.0 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|407465115|ref|YP_006775997.1| - 0.0013 19.0 0.1 0.0033 17.7 0.1 1.7 1 1 0 1 1 1 1 ACT domain Saccharop_dh_N PF04455.7 gi|407465115|ref|YP_006775997.1| - 0.065 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region eIF2_C PF09173.6 gi|407465115|ref|YP_006775997.1| - 0.091 12.8 0.2 0.18 11.8 0.1 1.6 1 1 0 1 1 1 0 Initiation factor eIF2 gamma, C terminal Acylphosphatase PF00708.13 gi|407465115|ref|YP_006775997.1| - 0.11 12.6 0.1 1.1 9.3 0.0 2.1 2 0 0 2 2 2 0 Acylphosphatase TPP_enzyme_N PF02776.13 gi|407465116|ref|YP_006775998.1| - 6.1e-61 204.8 0.4 1.3e-58 197.2 0.1 2.5 2 1 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|407465116|ref|YP_006775998.1| - 3.5e-47 159.7 0.6 1.6e-46 157.6 0.0 2.4 3 1 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|407465116|ref|YP_006775998.1| - 1.9e-44 150.7 0.1 4.5e-44 149.5 0.1 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain SnoaL_3 PF13474.1 gi|407465117|ref|YP_006775999.1| - 2.5e-07 30.7 0.0 3e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain CaMKII_AD PF08332.5 gi|407465117|ref|YP_006775999.1| - 0.00061 19.6 0.1 0.0013 18.6 0.1 1.5 1 1 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II Association DUF4440 PF14534.1 gi|407465117|ref|YP_006775999.1| - 0.0039 17.3 0.0 0.0046 17.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) DeoC PF01791.4 gi|407465118|ref|YP_006776000.1| - 8.5e-22 77.5 0.0 1.2e-21 77.1 0.0 1.2 1 0 0 1 1 1 1 DeoC/LacD family aldolase ThiG PF05690.9 gi|407465118|ref|YP_006776000.1| - 0.074 12.1 0.0 0.15 11.0 0.0 1.6 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG ADH_N PF08240.7 gi|407465119|ref|YP_006776001.1| - 1.6e-23 82.5 1.6 3.2e-23 81.5 1.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|407465119|ref|YP_006776001.1| - 6.4e-23 80.7 0.0 9e-23 80.2 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 gi|407465119|ref|YP_006776001.1| - 0.0029 18.4 0.1 0.0049 17.7 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_18 PF12847.2 gi|407465119|ref|YP_006776001.1| - 0.044 14.3 0.1 0.15 12.6 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain ATP-synt_F PF01990.12 gi|407465120|ref|YP_006776002.1| - 4.5e-14 52.5 0.1 5.7e-14 52.2 0.0 1.1 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit MMR_HSR1 PF01926.18 gi|407465120|ref|YP_006776002.1| - 0.0057 16.6 0.1 0.0072 16.2 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Herpes_U55 PF06501.6 gi|407465121|ref|YP_006776003.1| - 0.095 11.2 0.0 0.11 11.0 0.0 1.0 1 0 0 1 1 1 0 Human herpesvirus U55 protein SWIM PF04434.12 gi|407465123|ref|YP_006776005.1| - 0.004 16.5 0.3 0.0065 15.9 0.2 1.3 1 0 0 1 1 1 1 SWIM zinc finger Metallophos PF00149.23 gi|407465124|ref|YP_006776006.1| - 1.8e-09 37.2 0.6 5.1e-08 32.5 0.0 2.2 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|407465124|ref|YP_006776006.1| - 1e-06 28.6 0.2 1.8e-06 27.8 0.2 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.1 gi|407465124|ref|YP_006776006.1| - 0.058 12.5 0.1 1.7 7.7 0.1 2.2 1 1 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily Zn-ribbon_8 PF09723.5 gi|407465125|ref|YP_006776007.1| - 0.015 15.2 0.9 0.047 13.6 0.6 1.8 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.1 gi|407465125|ref|YP_006776007.1| - 0.026 13.9 1.8 0.13 11.7 1.2 2.0 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407465125|ref|YP_006776007.1| - 0.067 12.7 1.3 8.8 6.0 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|407465125|ref|YP_006776007.1| - 0.081 12.7 0.5 0.14 11.9 0.4 1.4 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_4 PF13717.1 gi|407465125|ref|YP_006776007.1| - 0.095 12.4 1.6 9.8 5.9 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain HxlR PF01638.12 gi|407465125|ref|YP_006776007.1| - 0.095 12.3 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Elf1 PF05129.8 gi|407465125|ref|YP_006776007.1| - 0.17 11.5 2.3 0.2 11.3 0.1 2.0 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zf-ribbon_3 PF13248.1 gi|407465125|ref|YP_006776007.1| - 1.2 8.4 5.3 6.7 6.0 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain GATase PF00117.23 gi|407465126|ref|YP_006776008.1| - 2.2e-44 151.2 0.1 4.6e-44 150.1 0.0 1.5 2 0 0 2 2 2 1 Glutamine amidotransferase class-I CPSase_sm_chain PF00988.17 gi|407465126|ref|YP_006776008.1| - 1.8e-36 124.4 0.0 4.3e-36 123.3 0.0 1.7 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain Peptidase_C26 PF07722.8 gi|407465126|ref|YP_006776008.1| - 3.2e-08 33.2 0.3 3.6e-06 26.5 0.2 2.5 1 1 0 1 1 1 1 Peptidase C26 DUF3867 PF12983.2 gi|407465126|ref|YP_006776008.1| - 0.043 13.8 0.3 0.09 12.7 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3867) TcdB_N PF12918.2 gi|407465126|ref|YP_006776008.1| - 0.1 12.7 0.0 0.23 11.5 0.0 1.7 1 0 0 1 1 1 0 TcdB toxin N-terminal helical domain AAA PF00004.24 gi|407465127|ref|YP_006776009.1| - 2.7e-38 131.1 0.0 1.1e-37 129.2 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MIT PF04212.13 gi|407465127|ref|YP_006776009.1| - 2.8e-09 36.7 1.3 1e-08 34.9 0.4 2.3 2 0 0 2 2 2 1 MIT (microtubule interacting and transport) domain AAA_2 PF07724.9 gi|407465127|ref|YP_006776009.1| - 1.6e-07 31.4 0.0 3.8e-07 30.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.1 gi|407465127|ref|YP_006776009.1| - 8.4e-07 29.1 0.0 6e-06 26.4 0.0 2.4 2 1 0 2 2 2 1 AAA domain RuvB_N PF05496.7 gi|407465127|ref|YP_006776009.1| - 9.2e-06 24.8 0.0 3.4e-05 23.0 0.0 2.0 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Zeta_toxin PF06414.7 gi|407465127|ref|YP_006776009.1| - 2.1e-05 23.7 0.0 8.9e-05 21.6 0.0 2.0 1 1 0 1 1 1 1 Zeta toxin AAA_16 PF13191.1 gi|407465127|ref|YP_006776009.1| - 3.3e-05 23.9 0.2 0.03 14.2 0.0 3.7 2 1 2 4 4 4 1 AAA ATPase domain Vps4_C PF09336.5 gi|407465127|ref|YP_006776009.1| - 7.9e-05 22.4 0.1 0.00037 20.3 0.0 2.1 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_24 PF13479.1 gi|407465127|ref|YP_006776009.1| - 9.4e-05 22.0 0.0 0.00024 20.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|407465127|ref|YP_006776009.1| - 0.00012 21.5 0.3 0.0027 17.1 0.1 2.2 1 1 0 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|407465127|ref|YP_006776009.1| - 0.00024 20.9 0.1 0.0025 17.6 0.0 2.4 3 0 0 3 3 2 1 AAA domain AAA_14 PF13173.1 gi|407465127|ref|YP_006776009.1| - 0.00072 19.4 0.0 0.0027 17.6 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_11 PF13086.1 gi|407465127|ref|YP_006776009.1| - 0.00077 19.1 0.0 0.0059 16.2 0.0 2.1 1 1 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|407465127|ref|YP_006776009.1| - 0.0018 19.0 0.0 0.0049 17.6 0.0 1.9 1 1 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|407465127|ref|YP_006776009.1| - 0.0022 17.7 0.0 2.8 7.5 0.0 2.7 1 1 1 2 2 2 2 Archaeal ATPase AAA_5 PF07728.9 gi|407465127|ref|YP_006776009.1| - 0.0022 17.7 0.1 0.016 14.9 0.0 2.6 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.16 gi|407465127|ref|YP_006776009.1| - 0.0039 16.3 0.1 0.0091 15.1 0.1 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.1 gi|407465127|ref|YP_006776009.1| - 0.005 16.5 0.0 0.016 14.9 0.0 1.8 1 0 0 1 1 1 1 Part of AAA domain IstB_IS21 PF01695.12 gi|407465127|ref|YP_006776009.1| - 0.0052 16.2 0.0 0.0097 15.3 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein TIP49 PF06068.8 gi|407465127|ref|YP_006776009.1| - 0.0084 14.8 0.0 0.014 14.1 0.0 1.3 1 0 0 1 1 1 1 TIP49 C-terminus Peptidase_M28 PF04389.12 gi|407465127|ref|YP_006776009.1| - 0.011 15.4 0.0 0.028 14.1 0.0 1.6 2 0 0 2 2 1 0 Peptidase family M28 KAP_NTPase PF07693.9 gi|407465127|ref|YP_006776009.1| - 0.019 13.9 0.0 0.6 9.0 0.0 2.2 1 1 1 2 2 2 0 KAP family P-loop domain AAA-ATPase_like PF09820.4 gi|407465127|ref|YP_006776009.1| - 0.022 13.9 0.1 0.4 9.7 0.0 2.4 2 0 0 2 2 2 0 Predicted AAA-ATPase KaiC PF06745.8 gi|407465127|ref|YP_006776009.1| - 0.039 13.0 0.1 1.6 7.7 0.0 2.2 1 1 1 2 2 2 0 KaiC RNA_helicase PF00910.17 gi|407465127|ref|YP_006776009.1| - 0.05 13.7 0.1 0.36 11.0 0.0 2.5 3 0 0 3 3 2 0 RNA helicase AAA_18 PF13238.1 gi|407465127|ref|YP_006776009.1| - 0.058 13.7 0.2 0.24 11.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain ResIII PF04851.10 gi|407465127|ref|YP_006776009.1| - 0.073 12.8 0.0 0.33 10.7 0.0 2.0 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_10 PF12846.2 gi|407465127|ref|YP_006776009.1| - 0.096 12.1 0.1 7.4 5.9 0.0 2.7 3 0 0 3 3 3 0 AAA-like domain PhoH PF02562.11 gi|407465127|ref|YP_006776009.1| - 0.11 11.7 0.2 0.23 10.6 0.1 1.5 1 0 0 1 1 1 0 PhoH-like protein NACHT PF05729.7 gi|407465127|ref|YP_006776009.1| - 0.12 12.0 0.2 0.39 10.3 0.0 1.9 2 0 0 2 2 1 0 NACHT domain Spc7 PF08317.6 gi|407465128|ref|YP_006776010.1| - 0.028 13.0 1.8 0.038 12.6 1.3 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF948 PF06103.6 gi|407465128|ref|YP_006776010.1| - 0.049 13.4 0.4 0.14 12.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Anthrax_toxA PF03497.11 gi|407465128|ref|YP_006776010.1| - 0.1 12.3 0.7 0.2 11.4 0.1 1.7 2 0 0 2 2 2 0 Anthrax toxin LF subunit TORC_C PF12886.2 gi|407465128|ref|YP_006776010.1| - 0.21 11.8 2.4 0.18 11.9 0.5 1.8 2 0 0 2 2 2 0 Transducer of regulated CREB activity, C terminus Syntaxin PF00804.20 gi|407465128|ref|YP_006776010.1| - 0.5 10.5 11.4 0.25 11.5 2.9 2.2 1 1 1 2 2 2 0 Syntaxin DNA_topoisoIV PF00521.15 gi|407465129|ref|YP_006776011.1| - 0.61 8.8 3.2 0.45 9.2 1.0 1.5 1 1 1 2 2 2 0 DNA gyrase/topoisomerase IV, subunit A TrmB PF01978.14 gi|407465130|ref|YP_006776012.1| - 2.8e-19 68.5 1.3 2.2e-17 62.5 0.2 2.6 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.3 gi|407465130|ref|YP_006776012.1| - 0.00019 20.4 0.1 0.00034 19.6 0.0 1.4 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB DUF2250 PF10007.4 gi|407465130|ref|YP_006776012.1| - 0.026 14.4 0.5 0.36 10.7 0.2 2.9 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2250) PadR PF03551.9 gi|407465130|ref|YP_006776012.1| - 0.038 13.7 0.5 1 9.1 0.0 3.1 3 0 0 3 3 3 0 Transcriptional regulator PadR-like family TFIIE_alpha PF02002.12 gi|407465130|ref|YP_006776012.1| - 0.083 12.4 0.9 11 5.5 0.0 2.8 3 1 0 3 3 3 0 TFIIE alpha subunit DUF4423 PF14394.1 gi|407465131|ref|YP_006776013.1| - 0.021 14.3 0.4 1.6 8.2 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4423) Cyclin_C PF02984.14 gi|407465131|ref|YP_006776013.1| - 0.088 12.7 5.9 2.2 8.2 0.5 2.7 1 1 0 2 2 2 0 Cyclin, C-terminal domain HTH_24 PF13412.1 gi|407465131|ref|YP_006776013.1| - 0.088 12.2 0.2 10 5.6 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF285 PF03382.9 gi|407465131|ref|YP_006776013.1| - 0.16 11.5 3.6 0.13 11.8 1.1 1.9 2 1 0 2 2 2 0 Mycoplasma protein of unknown function, DUF285 Rsbr_N PF08678.5 gi|407465131|ref|YP_006776013.1| - 0.95 9.3 7.0 9.7 6.0 0.2 2.3 1 1 1 2 2 2 0 Rsbr N terminal YjgF_endoribonc PF14588.1 gi|407465132|ref|YP_006776014.1| - 2e-33 115.4 0.0 2.2e-33 115.2 0.0 1.0 1 0 0 1 1 1 1 YjgF/chorismate_mutase-like, putative endoribonuclease Ribonuc_L-PSP PF01042.16 gi|407465132|ref|YP_006776014.1| - 1.2e-18 67.0 0.0 1.5e-18 66.6 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP BON PF04972.12 gi|407465132|ref|YP_006776014.1| - 0.047 13.4 0.0 5.9 6.7 0.0 2.4 2 0 0 2 2 2 0 BON domain A2M_N PF01835.14 gi|407465133|ref|YP_006776015.1| - 7.2e-08 32.5 0.3 0.0011 19.1 0.0 2.4 2 0 0 2 2 2 2 MG2 domain Haemagg_act PF05860.8 gi|407465133|ref|YP_006776015.1| - 0.019 14.7 0.3 0.1 12.3 0.2 2.0 2 0 0 2 2 2 0 haemagglutination activity domain LRRC37AB_C PF14914.1 gi|407465133|ref|YP_006776015.1| - 0.4 10.1 4.5 0.36 10.2 0.1 2.2 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain Pyridox_oxidase PF01243.15 gi|407465134|ref|YP_006776016.1| - 4.5e-08 32.9 0.0 7.1e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|407465134|ref|YP_006776016.1| - 7.2e-05 22.6 0.0 9e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase TFIIE_alpha PF02002.12 gi|407465134|ref|YP_006776016.1| - 0.0059 16.0 1.8 0.0063 15.9 0.5 1.6 2 0 0 2 2 2 1 TFIIE alpha subunit DUF2255 PF10012.4 gi|407465134|ref|YP_006776016.1| - 0.0064 16.4 0.1 0.015 15.2 0.1 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2255) DUF385 PF04075.9 gi|407465134|ref|YP_006776016.1| - 0.091 12.7 0.1 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF385) DHHA1 PF02272.14 gi|407465135|ref|YP_006776017.1| - 6.5e-12 44.9 2.6 8.6e-12 44.5 0.2 2.4 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.15 gi|407465135|ref|YP_006776017.1| - 0.00013 21.6 3.9 0.00019 21.0 1.8 2.0 2 1 0 2 2 2 1 DHH family Citrate_synt PF00285.16 gi|407465137|ref|YP_006776019.1| - 2.3e-141 470.6 0.0 2.6e-141 470.4 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase DUF1940 PF09155.5 gi|407465137|ref|YP_006776019.1| - 0.0057 16.4 0.2 0.019 14.7 0.1 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF1940) UPF0146 PF03686.8 gi|407465137|ref|YP_006776019.1| - 0.0069 16.1 0.1 0.069 12.9 0.0 2.3 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0146) Imm47 PF15586.1 gi|407465137|ref|YP_006776019.1| - 0.049 13.4 0.1 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 Immunity protein 47 Copper-bind PF00127.15 gi|407465140|ref|YP_006776022.1| - 1.4e-07 31.6 0.0 5.8e-07 29.6 0.0 2.1 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 gi|407465140|ref|YP_006776022.1| - 0.025 14.4 0.0 0.068 13.0 0.0 1.9 1 1 0 1 1 1 0 Cupredoxin-like domain Thioredox_DsbH PF03190.10 gi|407465140|ref|YP_006776022.1| - 0.099 12.3 0.3 13 5.4 0.0 2.9 2 1 1 3 3 3 0 Protein of unknown function, DUF255 UvrC_HhH_N PF08459.6 gi|407465141|ref|YP_006776023.1| - 4.8e-48 162.6 0.1 1.9e-47 160.6 0.0 2.1 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.19 gi|407465141|ref|YP_006776023.1| - 2e-13 50.5 1.4 8.1e-13 48.5 1.0 2.1 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.14 gi|407465141|ref|YP_006776023.1| - 1.1e-08 34.3 1.1 2.9e-08 32.9 0.8 1.8 1 0 0 1 1 1 1 UvrB/uvrC motif ABC_tran PF00005.22 gi|407465142|ref|YP_006776024.1| - 7.3e-23 81.3 0.8 1.9e-09 37.9 0.1 4.5 3 1 0 3 3 3 3 ABC transporter SMC_N PF02463.14 gi|407465142|ref|YP_006776024.1| - 1.7e-10 40.4 0.9 0.058 12.6 0.0 4.2 4 0 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|407465142|ref|YP_006776024.1| - 5.7e-08 32.1 0.2 0.014 14.8 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.1 gi|407465142|ref|YP_006776024.1| - 9.7e-08 32.3 13.7 0.00098 19.1 0.1 4.8 5 0 0 5 5 5 2 AAA domain AAA_16 PF13191.1 gi|407465142|ref|YP_006776024.1| - 1.5e-06 28.3 0.1 0.017 15.0 0.0 3.2 4 0 0 4 4 2 2 AAA ATPase domain AAA_14 PF13173.1 gi|407465142|ref|YP_006776024.1| - 4.4e-06 26.6 0.1 0.17 11.7 0.0 3.6 3 0 0 3 3 3 2 AAA domain AAA_33 PF13671.1 gi|407465142|ref|YP_006776024.1| - 4.5e-06 26.6 0.2 0.11 12.3 0.0 3.2 4 0 0 4 4 2 2 AAA domain DUF258 PF03193.11 gi|407465142|ref|YP_006776024.1| - 5.4e-06 25.6 0.5 0.049 12.8 0.2 2.6 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_25 PF13481.1 gi|407465142|ref|YP_006776024.1| - 1.1e-05 24.9 0.1 0.17 11.2 0.0 3.7 4 0 0 4 4 4 2 AAA domain AAA_22 PF13401.1 gi|407465142|ref|YP_006776024.1| - 1.9e-05 24.8 1.7 0.25 11.4 0.0 4.1 5 0 0 5 5 5 2 AAA domain NB-ARC PF00931.17 gi|407465142|ref|YP_006776024.1| - 3.9e-05 22.6 0.1 0.65 8.7 0.0 4.0 4 0 0 4 4 4 2 NB-ARC domain AAA_18 PF13238.1 gi|407465142|ref|YP_006776024.1| - 4e-05 23.9 0.1 0.69 10.2 0.0 3.3 3 0 0 3 3 2 2 AAA domain AAA_10 PF12846.2 gi|407465142|ref|YP_006776024.1| - 4.4e-05 23.0 0.3 0.17 11.2 0.0 2.9 3 0 0 3 3 3 2 AAA-like domain AAA_23 PF13476.1 gi|407465142|ref|YP_006776024.1| - 0.00014 22.2 0.2 0.00014 22.2 0.1 3.6 4 1 0 4 4 3 1 AAA domain Viral_helicase1 PF01443.13 gi|407465142|ref|YP_006776024.1| - 0.00033 20.2 0.0 0.038 13.4 0.0 2.6 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.1 gi|407465142|ref|YP_006776024.1| - 0.00037 20.2 0.0 1.1 9.1 0.0 3.3 4 0 0 4 4 3 1 Part of AAA domain AAA_17 PF13207.1 gi|407465142|ref|YP_006776024.1| - 0.00043 21.0 8.3 0.2 12.5 0.3 4.0 4 1 0 4 4 3 2 AAA domain MMR_HSR1 PF01926.18 gi|407465142|ref|YP_006776024.1| - 0.00051 19.9 4.1 0.018 14.9 0.1 3.5 3 1 0 3 3 3 1 50S ribosome-binding GTPase APS_kinase PF01583.15 gi|407465142|ref|YP_006776024.1| - 0.00084 19.0 0.2 1.2 8.7 0.0 2.6 2 0 0 2 2 2 2 Adenylylsulphate kinase DnaJ_CXXCXGXG PF00684.14 gi|407465142|ref|YP_006776024.1| - 0.0012 18.7 15.9 0.0023 17.9 0.3 4.3 4 1 1 5 5 4 1 DnaJ central domain NACHT PF05729.7 gi|407465142|ref|YP_006776024.1| - 0.0014 18.3 0.0 0.84 9.2 0.0 2.4 2 0 0 2 2 2 1 NACHT domain MobB PF03205.9 gi|407465142|ref|YP_006776024.1| - 0.0017 18.0 0.4 0.25 11.0 0.1 3.1 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B KaiC PF06745.8 gi|407465142|ref|YP_006776024.1| - 0.0019 17.3 0.2 1.1 8.3 0.0 3.0 3 0 0 3 3 3 1 KaiC Arch_ATPase PF01637.13 gi|407465142|ref|YP_006776024.1| - 0.0021 17.8 1.5 1.5 8.4 0.0 3.4 3 1 0 3 3 3 1 Archaeal ATPase cobW PF02492.14 gi|407465142|ref|YP_006776024.1| - 0.0037 16.7 1.1 0.39 10.1 0.1 2.7 3 0 0 3 3 2 1 CobW/HypB/UreG, nucleotide-binding domain FtsK_SpoIIIE PF01580.13 gi|407465142|ref|YP_006776024.1| - 0.0037 16.7 0.1 3 7.2 0.0 2.5 2 0 0 2 2 2 2 FtsK/SpoIIIE family T2SE PF00437.15 gi|407465142|ref|YP_006776024.1| - 0.0038 16.1 0.1 2.2 7.1 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein ArgK PF03308.11 gi|407465142|ref|YP_006776024.1| - 0.0046 15.7 0.1 0.36 9.5 0.0 3.1 3 0 0 3 3 3 1 ArgK protein RNA_helicase PF00910.17 gi|407465142|ref|YP_006776024.1| - 0.0083 16.2 0.0 2.4 8.3 0.0 3.0 2 0 0 2 2 2 1 RNA helicase PRK PF00485.13 gi|407465142|ref|YP_006776024.1| - 0.0088 15.6 0.6 0.21 11.0 0.0 2.7 3 0 0 3 3 2 1 Phosphoribulokinase / Uridine kinase family NTPase_1 PF03266.10 gi|407465142|ref|YP_006776024.1| - 0.0095 15.6 1.8 1.3 8.7 0.0 3.8 3 0 0 3 3 3 1 NTPase DUF2075 PF09848.4 gi|407465142|ref|YP_006776024.1| - 0.01 14.8 0.0 4.1 6.2 0.1 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Miro PF08477.8 gi|407465142|ref|YP_006776024.1| - 0.014 15.9 0.2 3.5 8.1 0.1 3.0 2 0 0 2 2 2 0 Miro-like protein Zeta_toxin PF06414.7 gi|407465142|ref|YP_006776024.1| - 0.036 13.1 0.0 2.8 6.9 0.0 2.7 3 0 0 3 3 3 0 Zeta toxin AAA_28 PF13521.1 gi|407465142|ref|YP_006776024.1| - 0.083 12.8 0.1 20 5.1 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|407465142|ref|YP_006776024.1| - 0.091 12.3 0.0 17 4.8 0.0 2.6 2 0 0 2 2 2 0 AAA domain zinc_ribbon_2 PF13240.1 gi|407465142|ref|YP_006776024.1| - 0.093 12.2 2.9 3.8 7.1 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|407465142|ref|YP_006776024.1| - 0.51 9.6 4.1 6.7 6.0 0.2 2.5 2 0 0 2 2 2 0 zinc-ribbon domain UvrB PF12344.3 gi|407465143|ref|YP_006776025.1| - 2.7e-21 74.8 5.1 7.6e-21 73.3 3.5 1.9 1 0 0 1 1 1 1 Ultra-violet resistance protein B Helicase_C PF00271.26 gi|407465143|ref|YP_006776025.1| - 2.3e-16 59.3 0.2 1.1e-15 57.1 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain UVR PF02151.14 gi|407465143|ref|YP_006776025.1| - 1.4e-09 37.1 4.3 8.4e-09 34.6 3.0 2.5 1 0 0 1 1 1 1 UvrB/uvrC motif ResIII PF04851.10 gi|407465143|ref|YP_006776025.1| - 1.2e-08 35.0 0.0 1.2e-08 35.0 0.0 3.1 3 1 1 4 4 4 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|407465143|ref|YP_006776025.1| - 5.8e-08 32.4 0.4 5.1e-05 22.8 0.1 3.4 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_19 PF13245.1 gi|407465143|ref|YP_006776025.1| - 0.00056 19.6 0.2 0.052 13.3 0.0 2.6 2 0 0 2 2 2 1 Part of AAA domain AAA_22 PF13401.1 gi|407465143|ref|YP_006776025.1| - 0.0068 16.5 0.2 0.66 10.1 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.1 gi|407465143|ref|YP_006776025.1| - 0.0084 15.7 0.1 0.21 11.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain Met_synt_B12 PF02965.12 gi|407465143|ref|YP_006776025.1| - 0.026 13.7 1.0 0.065 12.4 0.1 1.9 2 0 0 2 2 2 0 Vitamin B12 dependent methionine synthase, activation domain AAA_33 PF13671.1 gi|407465143|ref|YP_006776025.1| - 0.083 12.7 0.0 0.34 10.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain Tup_N PF08581.5 gi|407465143|ref|YP_006776025.1| - 1.9 8.7 13.9 0.63 10.2 0.1 3.6 3 1 1 4 4 4 0 Tup N-terminal Pyridox_ox_2 PF12900.2 gi|407465144|ref|YP_006776026.1| - 1.1e-21 77.1 0.0 1.4e-21 76.8 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxidase PF01243.15 gi|407465144|ref|YP_006776026.1| - 2.6e-11 43.3 0.0 5.7e-11 42.2 0.0 1.6 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase RNA_pol_Rpc34 PF05158.7 gi|407465145|ref|YP_006776027.1| - 0.026 13.6 0.1 0.026 13.6 0.1 1.5 2 0 0 2 2 2 0 RNA polymerase Rpc34 subunit Phage_hub_GP28 PF11110.3 gi|407465145|ref|YP_006776027.1| - 0.13 11.9 0.2 0.17 11.5 0.2 1.2 1 0 0 1 1 1 0 Baseplate hub distal subunit Bac_luciferase PF00296.15 gi|407465147|ref|YP_006776029.1| - 1e-54 185.7 0.0 1.3e-54 185.4 0.0 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Fe-ADH PF00465.14 gi|407465148|ref|YP_006776030.1| - 1.2e-50 172.2 0.0 2.8e-50 171.0 0.0 1.6 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.1 gi|407465148|ref|YP_006776030.1| - 1.3e-17 63.9 0.0 1.7e-17 63.5 0.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|407465148|ref|YP_006776030.1| - 0.012 14.5 0.0 0.74 8.6 0.0 2.2 2 0 0 2 2 2 0 3-dehydroquinate synthase DUF4147 PF13660.1 gi|407465149|ref|YP_006776031.1| - 1e-71 240.8 0.0 1.5e-71 240.2 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MOFRL PF05161.8 gi|407465149|ref|YP_006776031.1| - 4.5e-27 94.2 0.7 1.1e-26 93.0 0.5 1.7 1 0 0 1 1 1 1 MOFRL family Peptidase_C13 PF01650.13 gi|407465149|ref|YP_006776031.1| - 0.011 15.0 0.0 0.022 14.0 0.0 1.5 1 1 0 1 1 1 0 Peptidase C13 family Aconitase_B_N PF11791.3 gi|407465149|ref|YP_006776031.1| - 0.11 12.3 0.1 0.23 11.2 0.0 1.6 1 1 0 1 1 1 0 Aconitate B N-terminal domain RMMBL PF07521.7 gi|407465151|ref|YP_006776033.1| - 0.005 16.6 0.0 0.013 15.2 0.0 1.7 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|407465151|ref|YP_006776033.1| - 0.024 14.1 0.6 1.5 8.3 0.8 2.8 2 1 0 2 2 2 0 Beta-lactamase superfamily domain DRMBL PF07522.9 gi|407465151|ref|YP_006776033.1| - 0.046 13.7 0.0 0.12 12.4 0.0 1.6 2 0 0 2 2 2 0 DNA repair metallo-beta-lactamase Formyl_trans_N PF00551.14 gi|407465152|ref|YP_006776034.1| - 6.1e-46 156.2 0.1 6.9e-46 156.0 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase Cupin_2 PF07883.6 gi|407465153|ref|YP_006776035.1| - 1.3e-08 34.1 0.0 1.6e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Cupin domain CENP-C_C PF11699.3 gi|407465153|ref|YP_006776035.1| - 5.8e-06 26.1 0.3 7.2e-06 25.8 0.2 1.1 1 0 0 1 1 1 1 Mif2/CENP-C like AraC_binding PF02311.14 gi|407465153|ref|YP_006776035.1| - 0.00011 21.8 0.0 0.00015 21.4 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain ARD PF03079.9 gi|407465153|ref|YP_006776035.1| - 0.016 15.1 0.6 0.022 14.6 0.2 1.4 2 0 0 2 2 2 0 ARD/ARD' family MannoseP_isomer PF01050.13 gi|407465153|ref|YP_006776035.1| - 0.08 12.5 0.0 0.093 12.3 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Pirin_C PF05726.8 gi|407465153|ref|YP_006776035.1| - 0.15 12.1 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Pirin C-terminal cupin domain ABM PF03992.11 gi|407465154|ref|YP_006776036.1| - 1.1e-09 38.1 0.0 1.4e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase THF_DHG_CYH_C PF02882.14 gi|407465155|ref|YP_006776037.1| - 8.8e-60 200.4 0.7 1.3e-59 199.8 0.5 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.18 gi|407465155|ref|YP_006776037.1| - 2.2e-43 147.0 1.8 4.2e-43 146.1 1.2 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Semialdhyde_dh PF01118.19 gi|407465155|ref|YP_006776037.1| - 0.0092 16.2 0.0 0.024 14.9 0.0 1.8 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain 5-FTHF_cyc-lig PF01812.15 gi|407465156|ref|YP_006776038.1| - 1.2e-39 135.9 0.0 1.4e-39 135.8 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family DUF2603 PF10788.4 gi|407465156|ref|YP_006776038.1| - 0.12 12.1 0.7 0.45 10.2 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2603) GARS_A PF01071.14 gi|407465157|ref|YP_006776039.1| - 5.9e-79 264.1 0.1 7.8e-79 263.7 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.10 gi|407465157|ref|YP_006776039.1| - 6.7e-34 116.3 0.0 2.6e-33 114.4 0.0 1.9 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.11 gi|407465157|ref|YP_006776039.1| - 2e-31 108.0 0.0 3.7e-31 107.1 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.1 gi|407465157|ref|YP_006776039.1| - 3.7e-13 49.5 0.0 6.4e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 gi|407465157|ref|YP_006776039.1| - 2.9e-07 29.9 0.0 5e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|407465157|ref|YP_006776039.1| - 5e-06 25.4 0.0 0.00013 20.8 0.0 2.1 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.9 gi|407465157|ref|YP_006776039.1| - 5.4e-06 26.3 0.0 8.4e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.5 gi|407465157|ref|YP_006776039.1| - 1.5e-05 24.4 0.1 2.4e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|407465157|ref|YP_006776039.1| - 1.8e-05 24.1 0.0 3e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.8 gi|407465157|ref|YP_006776039.1| - 0.00016 21.1 0.0 0.00027 20.3 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.6 gi|407465157|ref|YP_006776039.1| - 0.0025 17.3 0.0 0.0057 16.1 0.0 1.6 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_ST PF14397.1 gi|407465157|ref|YP_006776039.1| - 0.072 12.1 0.2 0.16 11.0 0.1 1.6 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp ATP-grasp_5 PF13549.1 gi|407465157|ref|YP_006776039.1| - 0.11 11.6 0.0 0.22 10.6 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain tRNA-synt_1 PF00133.17 gi|407465158|ref|YP_006776040.1| - 5.3e-145 483.7 0.8 9.7e-145 482.9 0.5 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|407465158|ref|YP_006776040.1| - 4.8e-30 104.3 0.2 1.4e-29 102.8 0.2 1.8 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|407465158|ref|YP_006776040.1| - 1.2e-23 83.3 0.1 1.7e-09 36.8 0.0 3.8 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1f PF01921.13 gi|407465158|ref|YP_006776040.1| - 1.6e-05 23.8 0.0 4.8e-05 22.2 0.0 1.8 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1e PF01406.14 gi|407465158|ref|YP_006776040.1| - 4.5e-05 22.7 0.0 0.00046 19.4 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain Ferritin PF00210.19 gi|407465159|ref|YP_006776041.1| - 2.9e-19 69.2 0.0 3.9e-19 68.8 0.0 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.12 gi|407465159|ref|YP_006776041.1| - 0.022 15.0 0.0 0.032 14.5 0.0 1.3 1 0 0 1 1 1 0 Rubrerythrin ATP-grasp_2 PF08442.5 gi|407465161|ref|YP_006776043.1| - 1.3e-45 155.2 2.3 2.1e-45 154.5 1.6 1.3 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.14 gi|407465161|ref|YP_006776043.1| - 3.8e-15 55.8 0.3 9.8e-15 54.4 0.2 1.7 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.1 gi|407465161|ref|YP_006776043.1| - 3.7e-14 52.4 0.3 1.2e-13 50.7 0.2 1.8 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|407465161|ref|YP_006776043.1| - 4.7e-06 26.0 0.0 9.4e-06 25.0 0.0 1.6 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.1 gi|407465161|ref|YP_006776043.1| - 9.2e-05 22.2 0.0 0.00016 21.5 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 gi|407465161|ref|YP_006776043.1| - 0.018 14.3 0.1 0.045 13.1 0.1 1.6 1 1 0 1 1 1 0 ATP-grasp domain DUF4152 PF13680.1 gi|407465161|ref|YP_006776043.1| - 0.066 12.2 1.4 1.2 8.0 0.1 3.0 2 1 2 4 4 4 0 Protein of unknown function (DUF4152) Motilin_ghrelin PF04644.7 gi|407465161|ref|YP_006776043.1| - 0.081 12.7 0.2 0.18 11.6 0.1 1.5 1 0 0 1 1 1 0 Motilin/ghrelin CoA_binding PF02629.14 gi|407465162|ref|YP_006776044.1| - 6.1e-21 74.7 3.0 7.6e-21 74.4 0.9 2.0 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.14 gi|407465162|ref|YP_006776044.1| - 9.5e-08 31.7 0.1 1.7e-07 30.9 0.1 1.4 1 0 0 1 1 1 1 CoA-ligase CoA_binding_2 PF13380.1 gi|407465162|ref|YP_006776044.1| - 1.4e-05 25.2 0.0 2.2e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 CoA binding domain GFO_IDH_MocA PF01408.17 gi|407465162|ref|YP_006776044.1| - 0.00024 21.5 0.1 0.00042 20.8 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Succ_CoA_lig PF13607.1 gi|407465162|ref|YP_006776044.1| - 0.00032 20.3 0.0 0.00054 19.5 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain F420_oxidored PF03807.12 gi|407465162|ref|YP_006776044.1| - 0.097 13.1 1.1 1.3 9.4 0.1 2.7 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Laminin_EGF PF00053.19 gi|407465163|ref|YP_006776045.1| - 0.0039 17.0 1.3 0.0043 16.9 0.9 1.1 1 0 0 1 1 1 1 Laminin EGF-like (Domains III and V) Auto_anti-p27 PF06677.7 gi|407465163|ref|YP_006776045.1| - 0.037 13.7 1.3 2.3 8.0 0.0 2.1 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.2 gi|407465163|ref|YP_006776045.1| - 0.057 13.2 2.2 0.064 13.0 1.5 1.2 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|407465163|ref|YP_006776045.1| - 0.09 12.2 4.5 0.13 11.7 3.1 1.2 1 0 0 1 1 1 0 zinc-ribbon domain Ribosomal_L40e PF01020.12 gi|407465163|ref|YP_006776045.1| - 0.29 10.7 8.1 1.2 8.7 3.8 2.0 1 1 1 2 2 2 0 Ribosomal L40e family zf-tcix PF14952.1 gi|407465163|ref|YP_006776045.1| - 1.1 8.5 10.3 1.8 7.9 7.1 1.5 1 1 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding zf-CCHC PF00098.18 gi|407465163|ref|YP_006776045.1| - 8 6.5 8.2 6.5 6.8 1.0 2.4 2 0 0 2 2 2 0 Zinc knuckle HATPase_c PF02518.21 gi|407465165|ref|YP_006776047.1| - 1.2e-20 73.2 0.0 2e-20 72.5 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.1 gi|407465165|ref|YP_006776047.1| - 9.8e-11 41.2 0.0 2.2e-10 40.0 0.0 1.6 1 0 0 1 1 1 1 GHKL domain HisKA PF00512.20 gi|407465165|ref|YP_006776047.1| - 5.1e-09 35.9 0.0 1.2e-08 34.7 0.0 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain DUF4242 PF14026.1 gi|407465165|ref|YP_006776047.1| - 9.4e-07 28.8 0.0 2.3e-06 27.6 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF4242) Hemagglutinin PF00509.13 gi|407465165|ref|YP_006776047.1| - 0.047 11.8 0.4 0.076 11.1 0.3 1.3 1 0 0 1 1 1 0 Haemagglutinin NPV_P10 PF05531.7 gi|407465165|ref|YP_006776047.1| - 0.049 13.8 2.9 0.06 13.5 0.4 2.4 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF4082 PF13313.1 gi|407465166|ref|YP_006776048.1| - 0.00033 20.1 2.5 0.027 13.9 0.2 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4082) Ycf1 PF05758.7 gi|407465166|ref|YP_006776048.1| - 0.0046 14.7 0.2 0.0048 14.6 0.1 1.1 1 0 0 1 1 1 1 Ycf1 PD40 PF07676.7 gi|407465166|ref|YP_006776048.1| - 0.015 14.9 0.3 5.9 6.6 0.0 2.4 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat TraV PF09676.5 gi|407465166|ref|YP_006776048.1| - 0.029 15.0 0.3 0.05 14.3 0.2 1.4 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) Peptidase_S49_N PF08496.5 gi|407465166|ref|YP_006776048.1| - 0.19 11.4 5.7 0.35 10.6 3.9 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal U1snRNP70_N PF12220.3 gi|407465166|ref|YP_006776048.1| - 0.25 11.6 8.2 0.46 10.8 5.7 1.3 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Med17 PF10156.4 gi|407465166|ref|YP_006776048.1| - 1.1 7.4 6.6 1.5 6.9 4.6 1.1 1 0 0 1 1 1 0 Subunit 17 of Mediator complex NARP1 PF12569.3 gi|407465166|ref|YP_006776048.1| - 1.7 7.3 9.4 2.4 6.8 6.5 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 DUF3987 PF13148.1 gi|407465166|ref|YP_006776048.1| - 9.9 4.6 7.2 17 3.8 5.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) TPR_11 PF13414.1 gi|407465167|ref|YP_006776049.1| - 2.7e-43 145.4 9.5 9.4e-09 34.7 0.0 5.1 3 2 3 6 6 6 6 TPR repeat TPR_2 PF07719.12 gi|407465167|ref|YP_006776049.1| - 2e-37 124.0 7.2 3.8e-07 29.5 0.0 8.1 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_1 PF00515.23 gi|407465167|ref|YP_006776049.1| - 1.6e-36 122.4 17.1 2.4e-07 30.0 0.0 8.1 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407465167|ref|YP_006776049.1| - 2e-36 123.8 0.3 1.3e-08 35.2 0.0 4.8 2 1 4 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407465167|ref|YP_006776049.1| - 4.2e-25 85.5 18.2 9.5e-06 25.0 0.0 8.1 7 1 1 8 8 8 6 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407465167|ref|YP_006776049.1| - 7.9e-25 84.9 12.8 0.00038 20.4 0.0 8.2 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407465167|ref|YP_006776049.1| - 7.3e-24 82.0 0.2 0.0002 21.7 0.0 8.0 3 3 5 8 8 8 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407465167|ref|YP_006776049.1| - 1.2e-23 83.2 12.3 2.3e-07 31.0 0.2 5.5 3 1 3 6 6 6 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407465167|ref|YP_006776049.1| - 1e-22 79.8 5.8 0.0011 18.8 0.0 5.3 1 1 5 6 6 6 6 Tetratricopeptide repeat Apc3 PF12895.2 gi|407465167|ref|YP_006776049.1| - 3.8e-17 62.1 0.8 9.6e-08 32.0 0.0 3.6 1 1 3 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.1 gi|407465167|ref|YP_006776049.1| - 1e-13 50.8 9.0 0.013 15.3 0.0 8.1 9 0 0 9 9 9 3 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.1 gi|407465167|ref|YP_006776049.1| - 1.2e-11 43.4 1.8 0.035 13.8 0.0 6.4 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|407465167|ref|YP_006776049.1| - 3.4e-11 42.8 3.2 0.42 11.1 0.0 7.2 8 0 0 8 8 7 2 Tetratricopeptide repeat TPR_20 PF14561.1 gi|407465167|ref|YP_006776049.1| - 9.4e-08 32.0 0.2 0.16 12.0 0.0 4.5 3 2 1 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.1 gi|407465167|ref|YP_006776049.1| - 9.8e-08 31.7 0.0 0.0032 17.2 0.0 4.1 4 1 1 5 5 4 1 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|407465167|ref|YP_006776049.1| - 1e-07 31.4 1.7 7.9e-06 25.2 0.2 2.5 1 1 1 2 2 2 2 Coatomer epsilon subunit TPR_10 PF13374.1 gi|407465167|ref|YP_006776049.1| - 3.6e-07 29.8 2.7 0.13 12.1 0.1 5.6 6 0 0 6 6 6 1 Tetratricopeptide repeat NARP1 PF12569.3 gi|407465167|ref|YP_006776049.1| - 0.00068 18.5 0.6 4.6 5.8 0.0 3.7 2 1 1 4 4 4 1 NMDA receptor-regulated protein 1 TPR_21 PF09976.4 gi|407465167|ref|YP_006776049.1| - 0.0024 17.7 0.0 1 9.2 0.0 3.5 3 1 0 3 3 3 1 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|407465167|ref|YP_006776049.1| - 0.036 13.3 2.3 8.6 5.7 0.1 4.7 5 0 0 5 5 5 0 SHNi-TPR TPR_4 PF07721.9 gi|407465167|ref|YP_006776049.1| - 0.083 13.3 0.0 0.48 11.0 0.0 2.3 2 0 0 2 2 1 0 Tetratricopeptide repeat TPR_3 PF07720.7 gi|407465167|ref|YP_006776049.1| - 0.13 12.0 13.6 1.5 8.6 0.0 5.0 6 0 0 6 6 5 0 Tetratricopeptide repeat TrmB PF01978.14 gi|407465168|ref|YP_006776050.1| - 4.6e-16 58.2 0.0 1.1e-15 57.0 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|407465168|ref|YP_006776050.1| - 5.1e-06 25.9 0.0 1.2e-05 24.8 0.0 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|407465168|ref|YP_006776050.1| - 8.1e-06 25.4 0.0 1.5e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 MarR family DUF2250 PF10007.4 gi|407465168|ref|YP_006776050.1| - 0.00042 20.1 0.2 0.00084 19.2 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_20 PF12840.2 gi|407465168|ref|YP_006776050.1| - 0.0065 16.2 0.0 0.015 15.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Regulator_TrmB PF11495.3 gi|407465168|ref|YP_006776050.1| - 0.0084 15.1 0.0 0.013 14.4 0.0 1.3 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_9 PF08221.6 gi|407465168|ref|YP_006776050.1| - 0.019 14.8 0.0 0.089 12.6 0.0 2.1 1 1 1 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_5 PF01022.15 gi|407465168|ref|YP_006776050.1| - 0.024 14.2 0.0 0.077 12.6 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family DUF745 PF05335.8 gi|407465168|ref|YP_006776050.1| - 0.11 12.0 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF745) OpcA PF07239.6 gi|407465169|ref|YP_006776051.1| - 0.098 11.5 0.0 0.098 11.5 0.0 1.0 1 0 0 1 1 1 0 Outer membrane protein OpcA UPF0506 PF11703.3 gi|407465169|ref|YP_006776051.1| - 0.13 12.2 3.9 0.72 9.8 2.7 1.9 1 1 0 1 1 1 0 UPF0506 PHD PF00628.24 gi|407465169|ref|YP_006776051.1| - 0.14 11.8 2.5 0.23 11.1 1.7 1.5 1 1 0 1 1 1 0 PHD-finger YhfH PF14149.1 gi|407465169|ref|YP_006776051.1| - 0.25 11.1 0.3 0.25 11.1 0.2 1.7 2 0 0 2 2 2 0 YhfH-like protein CBM_6 PF03422.10 gi|407465170|ref|YP_006776052.1| - 0.087 12.9 0.1 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Carbohydrate binding module (family 6) Pyrophosphatase PF00719.14 gi|407465171|ref|YP_006776053.1| - 9.3e-59 197.3 0.1 1.1e-58 197.1 0.1 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase zf-UBP PF02148.14 gi|407465172|ref|YP_006776054.1| - 6.1e-12 45.4 8.7 6.1e-12 45.4 6.0 1.5 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein Prok-RING_2 PF14445.1 gi|407465172|ref|YP_006776054.1| - 0.04 13.8 2.4 0.072 13.0 1.7 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 FYVE PF01363.16 gi|407465172|ref|YP_006776054.1| - 0.72 9.7 7.8 0.86 9.5 5.4 1.3 1 0 0 1 1 1 0 FYVE zinc finger zf-RING_UBOX PF13445.1 gi|407465172|ref|YP_006776054.1| - 2.7 7.7 8.0 1.9 8.2 3.9 2.1 1 1 1 2 2 2 0 RING-type zinc-finger UPF0547 PF10571.4 gi|407465172|ref|YP_006776054.1| - 8 6.2 8.5 10 5.9 3.5 2.7 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 TBP PF00352.16 gi|407465173|ref|YP_006776055.1| - 6.4e-59 195.2 0.1 8.6e-29 98.7 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|407465173|ref|YP_006776055.1| - 1.7e-05 24.7 0.0 0.024 14.7 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) TFIIB PF00382.14 gi|407465174|ref|YP_006776056.1| - 6.7e-34 115.5 4.0 6.3e-19 67.5 0.1 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|407465174|ref|YP_006776056.1| - 4.9e-11 41.7 1.2 8.1e-11 41.0 0.8 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding zf-ribbon_3 PF13248.1 gi|407465174|ref|YP_006776056.1| - 0.00043 19.3 1.5 0.00086 18.4 1.0 1.4 1 0 0 1 1 1 1 zinc-ribbon domain Cyclin_C PF02984.14 gi|407465174|ref|YP_006776056.1| - 0.00088 19.1 0.0 0.86 9.5 0.0 3.0 3 0 0 3 3 3 1 Cyclin, C-terminal domain Sigma70_r4 PF04545.11 gi|407465174|ref|YP_006776056.1| - 0.0022 17.2 0.0 0.024 13.9 0.0 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 HARE-HTH PF05066.8 gi|407465174|ref|YP_006776056.1| - 0.012 15.9 0.1 0.071 13.4 0.0 2.2 2 1 0 2 2 2 0 HB1, ASXL, restriction endonuclease HTH domain Cyclin_N PF00134.18 gi|407465174|ref|YP_006776056.1| - 0.014 14.9 0.2 0.069 12.7 0.1 1.9 2 0 0 2 2 2 0 Cyclin, N-terminal domain A2L_zn_ribbon PF08792.5 gi|407465174|ref|YP_006776056.1| - 0.016 14.6 2.0 0.03 13.7 1.4 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Sigma70_r4_2 PF08281.7 gi|407465174|ref|YP_006776056.1| - 0.024 14.1 1.4 0.25 10.8 0.0 2.9 3 0 0 3 3 3 0 Sigma-70, region 4 zinc_ribbon_2 PF13240.1 gi|407465174|ref|YP_006776056.1| - 0.035 13.6 1.9 0.75 9.3 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain HTH_23 PF13384.1 gi|407465174|ref|YP_006776056.1| - 0.035 13.7 0.1 0.22 11.2 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain HTH_AsnC-type PF13404.1 gi|407465174|ref|YP_006776056.1| - 0.035 13.6 0.0 0.16 11.5 0.0 2.1 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DZR PF12773.2 gi|407465174|ref|YP_006776056.1| - 0.059 13.1 0.4 0.13 12.0 0.3 1.6 1 0 0 1 1 1 0 Double zinc ribbon HTH_11 PF08279.7 gi|407465174|ref|YP_006776056.1| - 0.067 12.8 1.9 0.51 10.0 0.0 2.8 3 0 0 3 3 3 0 HTH domain HypA PF01155.14 gi|407465174|ref|YP_006776056.1| - 0.076 12.6 0.1 0.27 10.9 0.1 1.9 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-NADH-PPase PF09297.6 gi|407465174|ref|YP_006776056.1| - 0.11 11.9 4.8 0.95 9.0 0.2 2.9 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Peptidase_M13_N PF05649.8 gi|407465174|ref|YP_006776056.1| - 0.14 11.1 1.6 0.76 8.7 0.2 2.1 2 0 0 2 2 2 0 Peptidase family M13 PvlArgDC PF01862.11 gi|407465177|ref|YP_006776059.1| - 1.8e-60 203.2 0.0 2e-60 203.1 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) ABC_membrane PF00664.18 gi|407465178|ref|YP_006776060.1| - 0.058 12.7 0.5 0.061 12.7 0.3 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region Thioredoxin_4 PF13462.1 gi|407465179|ref|YP_006776061.1| - 2.1e-44 151.4 0.0 3.2e-44 150.8 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.15 gi|407465179|ref|YP_006776061.1| - 5.5e-19 68.4 0.1 2e-16 60.1 0.1 2.2 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.1 gi|407465179|ref|YP_006776061.1| - 2.8e-09 37.1 0.0 6.6e-09 35.9 0.0 1.6 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_5 PF13743.1 gi|407465179|ref|YP_006776061.1| - 0.0048 16.4 0.0 0.0066 16.0 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin EssA PF10661.4 gi|407465179|ref|YP_006776061.1| - 0.054 13.1 2.7 1.4 8.6 0.2 2.4 2 1 0 2 2 2 0 WXG100 protein secretion system (Wss), protein EssA CEP19 PF14933.1 gi|407465179|ref|YP_006776061.1| - 0.068 13.4 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 CEP19-like protein DEAD PF00270.24 gi|407465180|ref|YP_006776062.1| - 8.3e-47 158.8 0.1 2.6e-44 150.7 0.0 2.1 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|407465180|ref|YP_006776062.1| - 1.1e-26 92.5 0.1 1.7e-25 88.7 0.1 2.6 3 0 0 3 3 3 1 Helicase conserved C-terminal domain SNF2_N PF00176.18 gi|407465180|ref|YP_006776062.1| - 0.00048 19.0 0.0 0.00075 18.3 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C_2 PF13307.1 gi|407465180|ref|YP_006776062.1| - 0.0049 16.8 0.0 0.0085 16.0 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain AAA_30 PF13604.1 gi|407465180|ref|YP_006776062.1| - 0.0056 16.2 0.1 0.014 15.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain ResIII PF04851.10 gi|407465180|ref|YP_006776062.1| - 0.0063 16.3 0.1 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.1 gi|407465180|ref|YP_006776062.1| - 0.015 14.3 0.4 0.046 12.7 0.0 1.9 2 1 1 3 3 3 0 U3-containing 90S pre-ribosomal complex subunit Mfp-3 PF04202.8 gi|407465180|ref|YP_006776062.1| - 2.6 8.2 13.2 5.8 7.1 9.1 1.5 1 0 0 1 1 1 0 Foot protein 3 AsnC_trans_reg PF01037.16 gi|407465181|ref|YP_006776063.1| - 1.9e-08 33.8 0.1 2.1e-08 33.7 0.1 1.1 1 0 0 1 1 1 1 AsnC family GYD PF08734.6 gi|407465181|ref|YP_006776063.1| - 0.001 18.7 0.0 0.0012 18.4 0.0 1.1 1 0 0 1 1 1 1 GYD domain DHO_dh PF01180.16 gi|407465181|ref|YP_006776063.1| - 0.093 11.6 0.1 0.1 11.5 0.0 1.0 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase Guanylate_cyc PF00211.15 gi|407465182|ref|YP_006776064.1| - 5.8e-20 71.4 0.2 8.5e-20 70.8 0.1 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Usp PF00582.21 gi|407465183|ref|YP_006776065.1| - 8e-27 94.1 0.0 9.1e-27 93.9 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF4252 PF14060.1 gi|407465183|ref|YP_006776065.1| - 0.011 15.3 1.2 0.013 15.0 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) Usp PF00582.21 gi|407465184|ref|YP_006776066.1| - 1.1e-29 103.4 0.0 1.2e-29 103.2 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Gly_kinase PF02595.10 gi|407465184|ref|YP_006776066.1| - 0.0089 14.7 0.5 0.015 14.0 0.3 1.4 1 1 0 1 1 1 1 Glycerate kinase family DXP_reductoisom PF02670.11 gi|407465184|ref|YP_006776066.1| - 0.041 14.4 0.1 0.057 13.9 0.1 1.2 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase NEAT PF05031.7 gi|407465184|ref|YP_006776066.1| - 0.09 12.7 1.2 0.15 12.0 0.8 1.3 1 0 0 1 1 1 0 Iron Transport-associated domain Bac_thur_toxin PF01338.13 gi|407465184|ref|YP_006776066.1| - 0.14 11.3 1.8 5.8 6.0 0.0 2.2 1 1 1 2 2 2 0 Bacillus thuringiensis toxin SDF PF00375.13 gi|407465185|ref|YP_006776067.1| - 1.5e-118 395.9 40.3 1.7e-118 395.7 27.9 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family HTH_20 PF12840.2 gi|407465186|ref|YP_006776068.1| - 8.4e-07 28.6 0.0 1.5e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|407465186|ref|YP_006776068.1| - 8.2e-05 22.2 0.0 0.00039 20.0 0.0 1.9 2 0 0 2 2 2 1 MarR family DUF4423 PF14394.1 gi|407465186|ref|YP_006776068.1| - 9e-05 22.0 0.0 0.00017 21.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_45 PF14947.1 gi|407465186|ref|YP_006776068.1| - 0.00043 20.0 1.0 0.0023 17.7 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DUF2250 PF10007.4 gi|407465186|ref|YP_006776068.1| - 0.0015 18.3 0.7 0.08 12.8 0.0 2.5 2 1 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_5 PF01022.15 gi|407465186|ref|YP_006776068.1| - 0.0022 17.6 0.1 0.021 14.4 0.0 2.5 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|407465186|ref|YP_006776068.1| - 0.0029 17.2 0.0 0.024 14.3 0.0 2.2 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Phage_rep_org_N PF09681.5 gi|407465186|ref|YP_006776068.1| - 0.0032 17.0 0.5 0.0076 15.8 0.0 1.8 2 0 0 2 2 2 1 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_24 PF13412.1 gi|407465186|ref|YP_006776068.1| - 0.0092 15.3 0.1 0.059 12.7 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|407465186|ref|YP_006776068.1| - 0.024 14.9 0.1 0.053 13.8 0.0 1.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain MarR PF01047.17 gi|407465186|ref|YP_006776068.1| - 0.052 13.2 0.0 2.5 7.8 0.0 2.6 3 0 0 3 3 3 0 MarR family zf-C3HC4_3 PF13920.1 gi|407465187|ref|YP_006776069.1| - 0.041 13.5 2.8 0.041 13.5 2.0 2.1 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) tRNA-synt_1g PF09334.6 gi|407465187|ref|YP_006776069.1| - 0.071 11.7 0.3 0.066 11.8 0.2 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-HIT PF04438.11 gi|407465187|ref|YP_006776069.1| - 0.083 12.5 9.2 0.1 12.2 2.8 2.2 2 0 0 2 2 2 0 HIT zinc finger FYVE_2 PF02318.11 gi|407465187|ref|YP_006776069.1| - 0.088 12.7 5.8 0.1 12.5 4.0 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger Elf1 PF05129.8 gi|407465187|ref|YP_006776069.1| - 0.11 12.1 5.6 0.14 11.9 3.9 1.1 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zf-rbx1 PF12678.2 gi|407465187|ref|YP_006776069.1| - 0.23 11.6 6.3 0.32 11.1 4.4 1.4 1 1 0 1 1 1 0 RING-H2 zinc finger zf-P11 PF03854.9 gi|407465187|ref|YP_006776069.1| - 1.3 8.5 7.6 3.9 7.0 0.9 2.4 1 1 1 2 2 2 0 P-11 zinc finger PolC_DP2 PF03833.8 gi|407465187|ref|YP_006776069.1| - 1.6 6.3 3.8 1.6 6.3 2.6 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DNA_RNApol_7kD PF03604.8 gi|407465187|ref|YP_006776069.1| - 1.8 8.0 9.5 24 4.4 6.6 2.3 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.2 gi|407465187|ref|YP_006776069.1| - 2 8.2 9.1 8.8 6.2 6.3 1.9 1 1 0 1 1 1 0 Double zinc ribbon FYVE PF01363.16 gi|407465187|ref|YP_006776069.1| - 4.6 7.2 7.9 6 6.8 5.4 1.4 1 1 0 1 1 1 0 FYVE zinc finger Tnp_zf-ribbon_2 PF13842.1 gi|407465187|ref|YP_006776069.1| - 5.7 7.4 9.7 35 4.8 6.7 2.1 1 1 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon zf-B_box PF00643.19 gi|407465187|ref|YP_006776069.1| - 7.1 6.6 11.7 0.55 10.1 2.6 2.4 2 1 1 3 3 3 0 B-box zinc finger zf-C2H2_3 PF13878.1 gi|407465187|ref|YP_006776069.1| - 9.2 5.9 10.0 1.4 8.5 0.5 3.1 2 1 1 3 3 3 0 zinc-finger of acetyl-transferase ESCO Hemerythrin PF01814.18 gi|407465188|ref|YP_006776070.1| - 4.4e-11 43.0 1.9 4.6e-11 43.0 0.2 1.8 2 0 0 2 2 2 1 Hemerythrin HHE cation binding domain DUF1786 PF08735.5 gi|407465188|ref|YP_006776070.1| - 0.0079 15.3 0.1 0.0092 15.1 0.1 1.1 1 0 0 1 1 1 1 Putative pyruvate format-lyase activating enzyme (DUF1786) Phage_C PF12025.3 gi|407465188|ref|YP_006776070.1| - 0.086 12.8 0.6 0.35 10.8 0.2 2.1 1 1 1 2 2 2 0 Phage protein C DUF1053 PF06327.9 gi|407465188|ref|YP_006776070.1| - 0.093 13.0 0.1 0.31 11.3 0.0 1.9 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1053) HAMP PF00672.20 gi|407465190|ref|YP_006776072.1| - 2.8e-16 59.4 1.8 3.2e-16 59.2 0.1 1.9 2 0 0 2 2 2 1 HAMP domain Guanylate_cyc PF00211.15 gi|407465190|ref|YP_006776072.1| - 3.2e-08 33.1 0.0 6e-08 32.2 0.0 1.4 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain YxiJ PF14176.1 gi|407465190|ref|YP_006776072.1| - 0.015 15.4 0.1 0.072 13.2 0.1 2.2 1 0 0 1 1 1 0 YxiJ-like protein DUF2015 PF09435.5 gi|407465190|ref|YP_006776072.1| - 0.15 11.8 2.0 0.47 10.2 0.3 2.5 2 1 0 2 2 2 0 Fungal protein of unknown function (DUF2015) Cu-oxidase_3 PF07732.10 gi|407465191|ref|YP_006776073.1| - 5.6e-25 87.3 5.0 1.8e-23 82.5 0.2 2.9 3 0 0 3 3 3 2 Multicopper oxidase Cu-oxidase_2 PF07731.9 gi|407465191|ref|YP_006776073.1| - 4.5e-14 52.1 7.1 8.3e-05 22.1 0.7 3.5 3 0 0 3 3 3 3 Multicopper oxidase Cupredoxin_1 PF13473.1 gi|407465191|ref|YP_006776073.1| - 1.8e-11 43.8 0.1 2.6e-06 27.2 0.0 3.6 3 0 0 3 3 3 2 Cupredoxin-like domain Copper-bind PF00127.15 gi|407465191|ref|YP_006776073.1| - 4.5e-10 39.6 7.3 1e-06 28.9 0.2 4.1 3 2 0 3 3 3 2 Copper binding proteins, plastocyanin/azurin family COX2 PF00116.15 gi|407465191|ref|YP_006776073.1| - 0.023 14.5 2.6 0.6 9.9 0.4 3.0 3 0 0 3 3 3 0 Cytochrome C oxidase subunit II, periplasmic domain Herpes_UL6 PF01763.11 gi|407465193|ref|YP_006776075.1| - 0.019 13.1 0.1 0.019 13.1 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like Cu-oxidase_3 PF07732.10 gi|407465194|ref|YP_006776076.1| - 8.8e-26 89.9 1.6 6.2e-25 87.2 0.1 2.6 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_2 PF07731.9 gi|407465194|ref|YP_006776076.1| - 2.6e-17 62.6 4.3 8.8e-07 28.5 0.0 3.6 3 0 0 3 3 3 3 Multicopper oxidase Cupredoxin_1 PF13473.1 gi|407465194|ref|YP_006776076.1| - 2.2e-11 43.5 0.1 8.4e-06 25.6 0.0 3.5 3 0 0 3 3 3 2 Cupredoxin-like domain Copper-bind PF00127.15 gi|407465194|ref|YP_006776076.1| - 4.2e-06 26.9 5.9 0.00064 19.8 0.5 3.7 3 1 0 3 3 3 2 Copper binding proteins, plastocyanin/azurin family AAA_16 PF13191.1 gi|407465195|ref|YP_006776077.1| - 0.14 12.1 0.0 0.4 10.6 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_17 PF13207.1 gi|407465195|ref|YP_006776077.1| - 0.22 12.3 2.8 16 6.3 0.0 3.0 2 2 0 3 3 3 0 AAA domain Copper-bind PF00127.15 gi|407465196|ref|YP_006776078.1| - 0.086 13.0 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Copper binding proteins, plastocyanin/azurin family Prominin PF05478.6 gi|407465197|ref|YP_006776079.1| - 0.0071 13.9 0.3 0.009 13.6 0.2 1.0 1 0 0 1 1 1 1 Prominin Muted PF14942.1 gi|407465197|ref|YP_006776079.1| - 0.031 14.1 1.3 0.04 13.8 0.9 1.1 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein PMT PF02366.13 gi|407465197|ref|YP_006776079.1| - 0.097 12.0 0.6 0.12 11.7 0.4 1.1 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Erf4 PF10256.4 gi|407465197|ref|YP_006776079.1| - 0.15 11.8 1.3 1.9 8.3 0.0 2.4 1 1 1 2 2 2 0 Golgin subfamily A member 7/ERF4 family MHCassoc_trimer PF08831.5 gi|407465197|ref|YP_006776079.1| - 0.35 10.7 2.8 1.7 8.5 1.9 1.9 1 1 0 1 1 1 0 Class II MHC-associated invariant chain trimerisation domain Laminin_II PF06009.7 gi|407465198|ref|YP_006776080.1| - 0.04 13.6 2.0 0.51 10.0 0.2 2.6 2 0 0 2 2 2 0 Laminin Domain II DUF2989 PF11207.3 gi|407465198|ref|YP_006776080.1| - 0.23 10.8 8.3 0.31 10.4 0.1 3.8 4 0 0 4 4 4 0 Protein of unknown function (DUF2989) zf-CHC2 PF01807.15 gi|407465198|ref|YP_006776080.1| - 0.26 10.8 3.4 11 5.6 0.1 3.1 2 1 0 2 2 2 0 CHC2 zinc finger DUF2513 PF10711.4 gi|407465201|ref|YP_006776083.1| - 0.015 15.3 0.1 0.019 15.0 0.0 1.3 1 1 0 1 1 1 0 Hypothetical protein (DUF2513) DUF4073 PF13285.1 gi|407465203|ref|YP_006776085.1| - 0.1 12.0 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4073) Tetraspannin PF00335.15 gi|407465204|ref|YP_006776086.1| - 0.022 14.0 0.3 0.03 13.6 0.2 1.2 1 0 0 1 1 1 0 Tetraspanin family Pox_A14 PF05767.7 gi|407465204|ref|YP_006776086.1| - 0.053 13.4 2.7 0.13 12.2 1.9 1.7 1 1 0 1 1 1 0 Poxvirus virion envelope protein A14 FlaC_arch PF05377.6 gi|407465204|ref|YP_006776086.1| - 0.14 12.0 4.0 2.9 7.8 0.5 2.6 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Serine_rich PF08824.5 gi|407465205|ref|YP_006776087.1| - 0.0044 16.7 0.1 0.0061 16.2 0.1 1.1 1 0 0 1 1 1 1 Serine rich protein interaction domain Ribosomal_S9 PF00380.14 gi|407465205|ref|YP_006776087.1| - 0.061 13.5 0.4 0.098 12.9 0.3 1.3 1 0 0 1 1 1 0 Ribosomal protein S9/S16 DUF2951 PF11166.3 gi|407465206|ref|YP_006776088.1| - 0.069 13.0 0.2 1.4 8.7 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2951) DUF3042 PF11240.3 gi|407465206|ref|YP_006776088.1| - 0.19 11.5 1.9 0.51 10.1 1.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3042) DivIC PF04977.10 gi|407465208|ref|YP_006776090.1| - 0.0026 17.2 1.7 0.0065 15.9 1.2 1.7 1 0 0 1 1 1 1 Septum formation initiator Phage_integrase PF00589.17 gi|407465208|ref|YP_006776090.1| - 0.0058 16.3 0.0 0.02 14.5 0.0 1.9 2 0 0 2 2 2 1 Phage integrase family Fib_alpha PF08702.5 gi|407465208|ref|YP_006776090.1| - 0.013 15.5 10.4 0.044 13.8 3.5 2.7 3 0 0 3 3 3 0 Fibrinogen alpha/beta chain family DUF1704 PF08014.6 gi|407465210|ref|YP_006776092.1| - 0.019 14.0 1.7 0.021 13.8 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1704) DUF3139 PF11337.3 gi|407465210|ref|YP_006776092.1| - 5.1 7.4 9.1 32 4.8 5.8 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) HPIP PF15226.1 gi|407465211|ref|YP_006776093.1| - 0.0011 18.9 0.0 0.0015 18.5 0.0 1.2 1 0 0 1 1 1 1 HCF-1 beta-propeller-interacting protein family Thioredox_DsbH PF03190.10 gi|407465214|ref|YP_006776096.1| - 4.2e-76 254.1 0.0 7.1e-76 253.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.1 gi|407465214|ref|YP_006776096.1| - 5.3e-14 51.9 0.0 1.1e-13 51.0 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like C5-epim_C PF06662.8 gi|407465214|ref|YP_006776096.1| - 7.6e-07 28.6 2.0 0.62 9.3 0.0 4.4 4 0 0 4 4 4 3 D-glucuronyl C5-epimerase C-terminus Glyco_hydro_88 PF07470.8 gi|407465214|ref|YP_006776096.1| - 9.3e-06 24.8 0.2 0.21 10.5 0.0 3.2 2 1 0 3 3 3 2 Glycosyl Hydrolase Family 88 Thioredoxin_2 PF13098.1 gi|407465214|ref|YP_006776096.1| - 0.00011 22.3 0.0 0.00041 20.5 0.0 2.0 1 0 0 1 1 1 1 Thioredoxin-like domain GlcNAc_2-epim PF07221.6 gi|407465214|ref|YP_006776096.1| - 0.00069 18.7 0.0 2 7.3 0.0 3.1 3 1 0 3 3 3 2 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) LANC_like PF05147.8 gi|407465214|ref|YP_006776096.1| - 0.001 17.7 2.5 0.031 12.8 0.2 3.7 4 1 0 4 4 4 1 Lanthionine synthetase C-like protein DUF1680 PF07944.7 gi|407465214|ref|YP_006776096.1| - 0.022 13.0 0.2 0.3 9.3 0.0 2.5 2 1 1 3 3 3 0 Putative glycosyl hydrolase of unknown function (DUF1680) Glyco_hydro_76 PF03663.9 gi|407465214|ref|YP_006776096.1| - 0.023 14.0 0.2 0.13 11.6 0.1 2.1 2 1 0 2 2 2 0 Glycosyl hydrolase family 76 DUF2951 PF11166.3 gi|407465215|ref|YP_006776097.1| - 0.04 13.7 1.0 0.046 13.5 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) ADH_N PF08240.7 gi|407465216|ref|YP_006776098.1| - 3e-31 107.3 1.1 5.3e-31 106.5 0.8 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|407465216|ref|YP_006776098.1| - 4.9e-15 55.2 0.5 8.5e-15 54.4 0.3 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 gi|407465216|ref|YP_006776098.1| - 1.3e-05 26.0 0.0 2.8e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.14 gi|407465216|ref|YP_006776098.1| - 0.00062 18.9 0.1 0.0013 17.9 0.1 1.6 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CoA_binding PF02629.14 gi|407465216|ref|YP_006776098.1| - 0.01 16.3 6.2 0.4 11.2 2.7 3.5 2 1 1 3 3 3 0 CoA binding domain Methyltransf_18 PF12847.2 gi|407465216|ref|YP_006776098.1| - 0.017 15.6 0.1 0.046 14.3 0.1 1.7 1 0 0 1 1 1 0 Methyltransferase domain FlaG PF03646.10 gi|407465216|ref|YP_006776098.1| - 0.097 12.8 0.1 0.22 11.7 0.1 1.6 1 0 0 1 1 1 0 FlaG protein MutS_II PF05188.12 gi|407465217|ref|YP_006776099.1| - 0.035 14.1 0.1 0.04 13.9 0.1 1.1 1 0 0 1 1 1 0 MutS domain II PHA_gran_rgn PF09650.5 gi|407465217|ref|YP_006776099.1| - 0.038 14.0 0.2 0.042 13.9 0.1 1.1 1 0 0 1 1 1 0 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) DUF2465 PF10239.4 gi|407465217|ref|YP_006776099.1| - 0.047 12.8 0.7 0.049 12.8 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2465) DUF2779 PF11074.3 gi|407465217|ref|YP_006776099.1| - 0.11 12.4 0.7 0.12 12.4 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function(DUF2779) Creatinase_N PF01321.13 gi|407465217|ref|YP_006776099.1| - 0.13 12.7 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Creatinase/Prolidase N-terminal domain NPV_P10 PF05531.7 gi|407465217|ref|YP_006776099.1| - 0.21 11.8 2.4 0.61 10.3 0.3 2.0 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein OrfB_Zn_ribbon PF07282.6 gi|407465218|ref|YP_006776100.1| - 0.06 13.0 1.8 0.13 11.9 1.2 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Lar_restr_allev PF14354.1 gi|407465218|ref|YP_006776100.1| - 0.69 10.2 3.3 3.3 8.0 2.3 2.1 1 1 0 1 1 1 0 Restriction alleviation protein Lar FtsX PF02687.16 gi|407465221|ref|YP_006776103.1| - 0.077 12.7 6.3 0.099 12.4 4.4 1.1 1 0 0 1 1 1 0 FtsX-like permease family QueT PF06177.6 gi|407465221|ref|YP_006776103.1| - 0.14 12.1 2.4 0.16 11.9 1.7 1.1 1 0 0 1 1 1 0 QueT transporter Form-deh_trans PF09163.6 gi|407465221|ref|YP_006776103.1| - 0.14 11.6 0.1 0.14 11.6 0.0 1.9 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane ABC2_membrane_5 PF13346.1 gi|407465221|ref|YP_006776103.1| - 0.28 10.4 7.2 0.33 10.2 5.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Gram_pos_anchor PF00746.16 gi|407465221|ref|YP_006776103.1| - 0.3 10.9 2.7 0.57 10.0 0.1 2.0 2 0 0 2 2 2 0 Gram positive anchor DUF973 PF06157.6 gi|407465221|ref|YP_006776103.1| - 0.35 9.7 8.2 0.42 9.5 5.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF973) DUF3040 PF11239.3 gi|407465221|ref|YP_006776103.1| - 0.37 10.8 4.8 0.74 9.9 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) DUF4064 PF13273.1 gi|407465221|ref|YP_006776103.1| - 0.6 10.2 12.3 1.2 9.3 8.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) DUF2754 PF10953.3 gi|407465221|ref|YP_006776103.1| - 0.61 10.1 5.2 1.2 9.2 3.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2754) DUF4282 PF14110.1 gi|407465221|ref|YP_006776103.1| - 1.2 9.3 4.3 1.8 8.8 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) Tetraspannin PF00335.15 gi|407465221|ref|YP_006776103.1| - 1.9 7.7 6.4 2.4 7.4 4.4 1.1 1 0 0 1 1 1 0 Tetraspanin family SdpI PF13630.1 gi|407465221|ref|YP_006776103.1| - 4.4 7.0 14.7 1.7e+02 2.0 10.2 2.1 1 1 0 1 1 1 0 SdpI/YhfL protein family NfeD PF01957.13 gi|407465221|ref|YP_006776103.1| - 5.3 7.1 6.7 9.6 6.3 4.7 1.5 1 1 0 1 1 1 0 NfeD-like C-terminal, partner-binding DUF3185 PF11381.3 gi|407465221|ref|YP_006776103.1| - 9.8 6.0 16.3 1.2e+02 2.5 11.3 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3185) AsnC_trans_reg PF01037.16 gi|407465222|ref|YP_006776104.1| - 4.1e-10 39.2 0.1 4.3e-10 39.1 0.0 1.0 1 0 0 1 1 1 1 AsnC family Herpes_U44 PF04533.8 gi|407465222|ref|YP_006776104.1| - 0.073 12.3 0.3 0.096 11.9 0.2 1.3 1 1 0 1 1 1 0 Herpes virus U44 protein TruD PF01142.13 gi|407465223|ref|YP_006776105.1| - 2.9e-64 217.1 0.1 3.2e-64 216.9 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) SGL PF08450.7 gi|407465224|ref|YP_006776106.1| - 2.1e-05 24.0 3.2 0.18 11.1 0.0 4.1 4 1 1 5 5 5 3 SMP-30/Gluconolaconase/LRE-like region NHL PF01436.16 gi|407465224|ref|YP_006776106.1| - 0.00017 21.3 0.5 0.033 14.1 0.0 3.8 4 0 0 4 4 4 1 NHL repeat Reg_prop PF07494.6 gi|407465224|ref|YP_006776106.1| - 0.2 11.8 12.4 6.9 7.0 0.0 5.4 6 0 0 6 6 6 0 Two component regulator propeller PTH2 PF01981.11 gi|407465225|ref|YP_006776107.1| - 1.8e-43 146.9 0.1 2e-43 146.7 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Cupredoxin_1 PF13473.1 gi|407465226|ref|YP_006776108.1| - 2.8e-10 39.9 0.0 5.7e-10 39.0 0.0 1.5 1 1 0 1 1 1 1 Cupredoxin-like domain COX2 PF00116.15 gi|407465226|ref|YP_006776108.1| - 2.9e-06 27.0 0.0 7.6e-06 25.7 0.0 1.7 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain DUF3172 PF11371.3 gi|407465226|ref|YP_006776108.1| - 0.024 14.1 0.1 0.044 13.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3172) Spectrin PF00435.16 gi|407465226|ref|YP_006776108.1| - 0.58 10.4 3.7 0.91 9.8 2.6 1.2 1 0 0 1 1 1 0 Spectrin repeat DUF4246 PF14033.1 gi|407465226|ref|YP_006776108.1| - 4 5.9 7.8 6.9 5.1 5.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4246) FAD_binding_3 PF01494.14 gi|407465227|ref|YP_006776109.1| - 5.4e-07 28.9 0.3 0.014 14.4 0.0 2.9 2 1 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.7 gi|407465227|ref|YP_006776109.1| - 1.5e-05 24.1 0.0 0.002 17.1 0.0 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.1 gi|407465227|ref|YP_006776109.1| - 0.00015 21.7 0.5 0.00057 19.8 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|407465227|ref|YP_006776109.1| - 0.00045 19.2 0.4 0.036 12.9 0.1 2.4 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|407465227|ref|YP_006776109.1| - 0.0038 16.3 0.0 0.031 13.3 0.0 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|407465227|ref|YP_006776109.1| - 0.0092 14.4 0.3 0.079 11.4 0.0 2.3 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.9 gi|407465227|ref|YP_006776109.1| - 0.026 14.4 2.5 0.095 12.5 1.7 2.1 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|407465227|ref|YP_006776109.1| - 0.034 13.2 0.2 0.077 12.0 0.1 1.6 1 0 0 1 1 1 0 Thi4 family FAD_binding_2 PF00890.19 gi|407465227|ref|YP_006776109.1| - 0.074 11.8 0.0 0.12 11.1 0.0 1.5 1 0 0 1 1 1 0 FAD binding domain Amino_oxidase PF01593.19 gi|407465227|ref|YP_006776109.1| - 0.081 11.9 0.0 0.13 11.2 0.0 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase DNA_ligase_ZBD PF03119.11 gi|407465228|ref|YP_006776110.1| - 0.021 14.5 1.7 0.091 12.4 1.2 2.2 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain PolC_DP2 PF03833.8 gi|407465228|ref|YP_006776110.1| - 0.11 10.1 10.6 0.11 10.1 7.3 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF1610 PF07754.6 gi|407465228|ref|YP_006776110.1| - 1.2 9.3 19.2 1.9 8.6 4.6 2.9 2 2 0 2 2 2 0 Domain of unknown function (DUF1610) zf-HIT PF04438.11 gi|407465228|ref|YP_006776110.1| - 1.7 8.3 22.4 0.095 12.3 3.2 3.2 2 1 0 2 2 2 0 HIT zinc finger C1_3 PF07649.7 gi|407465228|ref|YP_006776110.1| - 6.5 6.8 18.8 0.25 11.3 1.3 2.5 2 1 0 2 2 2 0 C1-like domain EF1_GNE PF00736.14 gi|407465229|ref|YP_006776111.1| - 1.1e-21 76.2 0.1 1.2e-21 76.1 0.0 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain AAA PF00004.24 gi|407465230|ref|YP_006776112.1| - 6e-88 291.8 0.0 3.5e-47 159.8 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|407465230|ref|YP_006776112.1| - 1.2e-24 86.0 0.5 5.1e-24 84.0 0.3 2.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.7 gi|407465230|ref|YP_006776112.1| - 1.1e-14 54.1 0.1 1.6e-08 33.9 0.0 3.0 3 0 0 3 3 3 2 Holliday junction DNA helicase ruvB N-terminus AAA_2 PF07724.9 gi|407465230|ref|YP_006776112.1| - 1.3e-12 47.9 0.0 2.9e-07 30.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_14 PF13173.1 gi|407465230|ref|YP_006776112.1| - 8.2e-12 45.1 0.0 1.1e-06 28.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|407465230|ref|YP_006776112.1| - 1e-11 45.1 0.4 0.0027 17.8 0.0 4.4 2 2 1 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|407465230|ref|YP_006776112.1| - 3e-11 43.6 0.0 0.00036 20.5 0.0 3.4 2 1 0 2 2 2 2 AAA ATPase domain AAA_5 PF07728.9 gi|407465230|ref|YP_006776112.1| - 1.5e-10 40.9 0.1 4.9e-05 23.0 0.0 3.9 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) Arch_ATPase PF01637.13 gi|407465230|ref|YP_006776112.1| - 1.9e-10 40.8 0.1 0.00029 20.5 0.0 3.7 2 1 1 3 3 3 3 Archaeal ATPase CDC48_2 PF02933.12 gi|407465230|ref|YP_006776112.1| - 2.9e-10 39.6 0.9 7.3e-10 38.3 0.3 1.9 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 AAA_17 PF13207.1 gi|407465230|ref|YP_006776112.1| - 5.4e-10 40.1 0.1 0.0019 18.9 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.1 gi|407465230|ref|YP_006776112.1| - 9.8e-09 35.2 0.0 0.0014 18.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.17 gi|407465230|ref|YP_006776112.1| - 1.7e-08 34.5 0.0 0.0022 18.1 0.0 2.8 2 0 0 2 2 2 2 RNA helicase AAA_18 PF13238.1 gi|407465230|ref|YP_006776112.1| - 1.1e-07 32.2 0.1 0.032 14.5 0.0 2.9 3 0 0 3 3 2 2 AAA domain AAA_25 PF13481.1 gi|407465230|ref|YP_006776112.1| - 2e-07 30.5 4.3 0.28 10.5 0.0 4.2 2 2 1 4 4 4 3 AAA domain ABC_tran PF00005.22 gi|407465230|ref|YP_006776112.1| - 6.7e-07 29.6 0.0 0.025 14.8 0.0 2.8 2 0 0 2 2 2 2 ABC transporter AAA_28 PF13521.1 gi|407465230|ref|YP_006776112.1| - 7.2e-07 29.3 0.0 0.035 14.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.12 gi|407465230|ref|YP_006776112.1| - 9.4e-07 28.4 0.0 0.04 13.3 0.0 2.8 3 0 0 3 3 3 2 IstB-like ATP binding protein Zeta_toxin PF06414.7 gi|407465230|ref|YP_006776112.1| - 3.6e-06 26.2 0.0 0.023 13.8 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin Sigma54_activ_2 PF14532.1 gi|407465230|ref|YP_006776112.1| - 5.5e-06 26.4 0.0 0.018 15.1 0.0 3.1 2 1 0 2 2 2 1 Sigma-54 interaction domain NACHT PF05729.7 gi|407465230|ref|YP_006776112.1| - 8.5e-06 25.5 0.5 0.38 10.3 0.0 3.8 4 0 0 4 4 3 1 NACHT domain Mg_chelatase PF01078.16 gi|407465230|ref|YP_006776112.1| - 1.1e-05 24.6 1.2 0.016 14.3 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI KaiC PF06745.8 gi|407465230|ref|YP_006776112.1| - 2.7e-05 23.4 3.2 0.16 11.0 0.0 3.7 3 2 1 4 4 3 2 KaiC AAA_24 PF13479.1 gi|407465230|ref|YP_006776112.1| - 2.8e-05 23.7 1.7 0.23 11.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.1 gi|407465230|ref|YP_006776112.1| - 0.00014 21.5 0.9 0.16 11.7 0.0 2.8 2 0 0 2 2 2 1 Part of AAA domain TIP49 PF06068.8 gi|407465230|ref|YP_006776112.1| - 0.00026 19.8 0.0 0.48 9.0 0.0 2.4 2 0 0 2 2 2 2 TIP49 C-terminus Rad17 PF03215.10 gi|407465230|ref|YP_006776112.1| - 0.00033 19.4 0.0 0.57 8.8 0.0 2.3 2 0 0 2 2 2 2 Rad17 cell cycle checkpoint protein Viral_helicase1 PF01443.13 gi|407465230|ref|YP_006776112.1| - 0.0004 19.9 0.0 0.11 12.0 0.0 2.8 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase PhoH PF02562.11 gi|407465230|ref|YP_006776112.1| - 0.00081 18.6 0.4 0.74 9.0 0.0 3.2 3 0 0 3 3 3 1 PhoH-like protein Sigma54_activat PF00158.21 gi|407465230|ref|YP_006776112.1| - 0.0012 18.3 0.0 0.65 9.4 0.0 3.2 2 1 0 2 2 2 1 Sigma-54 interaction domain ATP-synt_ab PF00006.20 gi|407465230|ref|YP_006776112.1| - 0.0042 16.6 0.0 2.6 7.4 0.0 2.6 2 1 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain SKI PF01202.17 gi|407465230|ref|YP_006776112.1| - 0.0044 16.8 0.0 1 9.1 0.0 3.0 3 0 0 3 3 3 1 Shikimate kinase DUF2075 PF09848.4 gi|407465230|ref|YP_006776112.1| - 0.0066 15.4 0.0 2 7.2 0.0 2.6 2 1 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) KAP_NTPase PF07693.9 gi|407465230|ref|YP_006776112.1| - 0.0086 15.0 0.3 4.5 6.1 0.0 3.3 2 2 1 3 3 3 0 KAP family P-loop domain AAA_3 PF07726.6 gi|407465230|ref|YP_006776112.1| - 0.01 15.4 0.0 4.3 6.9 0.0 2.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ResIII PF04851.10 gi|407465230|ref|YP_006776112.1| - 0.011 15.5 0.0 1.1 9.0 0.0 2.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_11 PF13086.1 gi|407465230|ref|YP_006776112.1| - 0.014 15.0 0.0 2.9 7.3 0.0 2.7 2 1 0 2 2 2 0 AAA domain UPF0079 PF02367.12 gi|407465230|ref|YP_006776112.1| - 0.019 14.5 0.1 2.4 7.8 0.0 2.4 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 AAA_10 PF12846.2 gi|407465230|ref|YP_006776112.1| - 0.021 14.2 0.4 12 5.2 0.0 3.6 2 2 1 4 4 4 0 AAA-like domain AAA_21 PF13304.1 gi|407465230|ref|YP_006776112.1| - 0.027 14.4 0.7 7.6 6.3 0.0 3.1 2 1 0 2 2 2 0 AAA domain SRPRB PF09439.5 gi|407465230|ref|YP_006776112.1| - 0.036 13.2 0.0 15 4.7 0.0 3.1 3 0 0 3 3 3 0 Signal recognition particle receptor beta subunit DAP3 PF10236.4 gi|407465230|ref|YP_006776112.1| - 0.04 12.8 0.0 2.4 7.0 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 Disulph_isomer PF06491.6 gi|407465230|ref|YP_006776112.1| - 0.061 13.1 0.0 5.2 6.9 0.0 2.4 2 0 0 2 2 2 0 Disulphide isomerase Parvo_NS1 PF01057.12 gi|407465230|ref|YP_006776112.1| - 0.08 11.7 0.1 3.7 6.3 0.0 2.2 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 NB-ARC PF00931.17 gi|407465230|ref|YP_006776112.1| - 0.091 11.5 0.3 3.3 6.4 0.0 2.5 2 0 0 2 2 2 0 NB-ARC domain UbiA PF01040.13 gi|407465232|ref|YP_006776114.1| - 3.2e-27 95.3 21.9 4.1e-27 95.0 15.2 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Copper-bind PF00127.15 gi|407465233|ref|YP_006776115.1| - 3.2e-13 49.7 0.6 6e-07 29.6 0.0 2.9 2 2 0 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 gi|407465233|ref|YP_006776115.1| - 4.2e-11 42.6 0.0 0.00018 21.3 0.0 2.4 1 1 1 2 2 2 2 Cupredoxin-like domain Lung_7-TM_R PF06814.8 gi|407465233|ref|YP_006776115.1| - 0.077 11.9 2.8 0.12 11.2 1.9 1.2 1 0 0 1 1 1 0 Lung seven transmembrane receptor EamA PF00892.15 gi|407465233|ref|YP_006776115.1| - 1.1 9.2 16.2 1.1 9.3 10.1 1.7 1 1 1 2 2 2 0 EamA-like transporter family Pox_A14 PF05767.7 gi|407465233|ref|YP_006776115.1| - 3.1 7.8 5.9 1.3 9.0 1.8 2.0 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 YtpI PF14007.1 gi|407465233|ref|YP_006776115.1| - 6.5 6.7 12.0 0.67 9.9 1.6 2.4 1 1 1 2 2 2 0 YtpI-like protein MARVEL PF01284.18 gi|407465233|ref|YP_006776115.1| - 9.5 6.0 17.1 15 5.3 2.4 2.3 1 1 1 2 2 2 0 Membrane-associating domain Prok-JAB PF14464.1 gi|407465234|ref|YP_006776116.1| - 4.4e-17 61.5 0.0 5.2e-17 61.3 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.16 gi|407465234|ref|YP_006776116.1| - 9.9e-08 31.7 0.0 1.3e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Toxin-JAB1 PF15659.1 gi|407465234|ref|YP_006776116.1| - 0.004 17.0 0.7 0.0073 16.2 0.2 1.6 1 1 1 2 2 2 1 JAB-like toxin 1 Cyclophil_like PF04126.8 gi|407465235|ref|YP_006776117.1| - 3e-38 130.1 0.0 3.5e-38 129.8 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin-like AAA_33 PF13671.1 gi|407465236|ref|YP_006776118.1| - 2.4e-12 46.9 0.1 2e-10 40.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.5 gi|407465236|ref|YP_006776118.1| - 0.00045 19.5 0.7 0.014 14.6 0.1 2.0 1 1 1 2 2 2 1 Chromatin associated protein KTI12 AAA_14 PF13173.1 gi|407465236|ref|YP_006776118.1| - 0.0093 15.8 0.1 0.011 15.6 0.1 1.3 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 gi|407465236|ref|YP_006776118.1| - 0.038 13.0 0.3 0.054 12.5 0.1 1.3 1 1 0 1 1 1 0 Zeta toxin ATP_bind_2 PF03668.10 gi|407465236|ref|YP_006776118.1| - 0.047 12.7 0.2 0.073 12.1 0.1 1.4 1 1 0 1 1 1 0 P-loop ATPase protein family GDA1_CD39 PF01150.12 gi|407465236|ref|YP_006776118.1| - 0.058 11.8 0.0 0.058 11.8 0.0 1.1 1 0 0 1 1 1 0 GDA1/CD39 (nucleoside phosphatase) family Pterin_bind PF00809.17 gi|407465236|ref|YP_006776118.1| - 0.058 12.7 0.0 0.075 12.3 0.0 1.1 1 0 0 1 1 1 0 Pterin binding enzyme DUF2024 PF09630.5 gi|407465237|ref|YP_006776119.1| - 3e-38 129.4 0.9 3.3e-38 129.2 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2024) CCG PF02754.11 gi|407465237|ref|YP_006776119.1| - 0.048 13.6 0.0 0.074 13.0 0.0 1.2 1 0 0 1 1 1 0 Cysteine-rich domain Adeno_E3_CR1 PF02440.10 gi|407465238|ref|YP_006776120.1| - 0.027 13.9 1.1 0.033 13.6 0.8 1.1 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 H_PPase PF03030.11 gi|407465239|ref|YP_006776121.1| - 1.2e-226 754.1 54.0 1.4e-226 753.9 37.4 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase PepSY_TM_1 PF13172.1 gi|407465239|ref|YP_006776121.1| - 0.066 12.9 0.2 0.066 12.9 0.2 4.4 5 0 0 5 5 5 0 PepSY-associated TM helix DUF3481 PF11980.3 gi|407465239|ref|YP_006776121.1| - 5 7.0 5.8 0.77 9.6 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF3481) DUF45 PF01863.12 gi|407465240|ref|YP_006776122.1| - 0.0011 18.8 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF45 SprT-like PF10263.4 gi|407465240|ref|YP_006776122.1| - 0.0017 18.0 0.0 0.0018 17.9 0.0 1.2 1 0 0 1 1 1 1 SprT-like family Peptidase_M76 PF09768.4 gi|407465240|ref|YP_006776122.1| - 0.037 13.4 0.0 0.044 13.2 0.0 1.2 1 0 0 1 1 1 0 Peptidase M76 family Peptidase_MA_2 PF13485.1 gi|407465240|ref|YP_006776122.1| - 0.059 13.4 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 Peptidase MA superfamily DUF359 PF04019.7 gi|407465241|ref|YP_006776123.1| - 3.9e-36 123.0 0.1 5.6e-36 122.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF359) ParA PF10609.4 gi|407465242|ref|YP_006776124.1| - 1.2e-36 124.3 0.4 8.4e-36 121.7 0.3 2.1 2 0 0 2 2 2 1 ParA/MinD ATPase like CbiA PF01656.18 gi|407465242|ref|YP_006776124.1| - 2.1e-19 69.6 0.1 3.5e-19 68.9 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF59 PF01883.14 gi|407465242|ref|YP_006776124.1| - 1.1e-17 63.7 3.5 1.7e-17 63.1 0.1 2.8 4 0 0 4 4 4 1 Domain of unknown function DUF59 AAA_31 PF13614.1 gi|407465242|ref|YP_006776124.1| - 2.2e-11 43.9 0.1 6.6e-11 42.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain MipZ PF09140.6 gi|407465242|ref|YP_006776124.1| - 3.5e-08 32.8 0.0 6e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.13 gi|407465242|ref|YP_006776124.1| - 1.4e-06 27.7 0.1 0.0022 17.2 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_26 PF13500.1 gi|407465242|ref|YP_006776124.1| - 1.5e-06 27.9 0.5 0.015 14.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain ArsA_ATPase PF02374.10 gi|407465242|ref|YP_006776124.1| - 2.2e-05 23.6 2.5 3.1e-05 23.1 0.9 1.8 2 0 0 2 2 2 1 Anion-transporting ATPase VirC1 PF07015.6 gi|407465242|ref|YP_006776124.1| - 0.0025 16.9 0.0 0.0051 15.9 0.0 1.5 1 0 0 1 1 1 1 VirC1 protein ArgK PF03308.11 gi|407465242|ref|YP_006776124.1| - 0.0092 14.7 0.2 0.015 14.1 0.1 1.3 1 0 0 1 1 1 1 ArgK protein AAA_25 PF13481.1 gi|407465242|ref|YP_006776124.1| - 0.011 15.1 0.0 0.063 12.6 0.3 1.9 2 0 0 2 2 2 0 AAA domain APS_kinase PF01583.15 gi|407465242|ref|YP_006776124.1| - 0.13 11.9 0.1 0.27 10.8 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase SHS2_Rpb7-N PF03876.12 gi|407465243|ref|YP_006776125.1| - 2.6e-16 59.5 0.0 6.6e-16 58.2 0.0 1.7 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.18 gi|407465243|ref|YP_006776125.1| - 2.8e-14 52.9 0.0 4.7e-14 52.2 0.0 1.3 1 0 0 1 1 1 1 S1 RNA binding domain S1_2 PF13509.1 gi|407465243|ref|YP_006776125.1| - 0.017 15.0 0.0 0.028 14.3 0.0 1.4 1 0 0 1 1 1 0 S1 domain BPL_C PF02237.12 gi|407465243|ref|YP_006776125.1| - 0.031 13.9 0.0 0.069 12.8 0.0 1.5 1 0 0 1 1 1 0 Biotin protein ligase C terminal domain Spt4 PF06093.8 gi|407465244|ref|YP_006776126.1| - 4.7e-14 52.0 0.4 5.9e-14 51.7 0.3 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger TF_Zn_Ribbon PF08271.7 gi|407465244|ref|YP_006776126.1| - 0.0032 16.7 1.9 0.017 14.4 0.1 2.1 1 1 1 2 2 2 1 TFIIB zinc-binding zinc_ribbon_5 PF13719.1 gi|407465244|ref|YP_006776126.1| - 0.087 12.4 2.6 3.9 7.1 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF1272 PF06906.6 gi|407465244|ref|YP_006776126.1| - 0.092 12.6 1.6 0.12 12.2 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) DZR PF12773.2 gi|407465244|ref|YP_006776126.1| - 0.092 12.5 2.8 0.28 11.0 1.9 1.7 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_4 PF13717.1 gi|407465244|ref|YP_006776126.1| - 0.14 11.8 3.4 4.8 6.9 0.4 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|407465244|ref|YP_006776126.1| - 0.18 11.0 4.5 0.35 10.1 0.3 2.0 1 1 1 2 2 2 0 zinc-ribbon domain VP_N-CPKC PF11475.3 gi|407465244|ref|YP_006776126.1| - 0.24 10.9 1.7 0.31 10.6 1.2 1.2 1 0 0 1 1 1 0 Virion protein N terminal domain Prim_Zn_Ribbon PF08273.7 gi|407465244|ref|YP_006776126.1| - 0.29 11.2 2.6 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase zf-RING_4 PF14570.1 gi|407465244|ref|YP_006776126.1| - 0.38 10.3 3.0 0.58 9.7 2.1 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn-ribbon_8 PF09723.5 gi|407465244|ref|YP_006776126.1| - 2.9 7.9 5.2 50 3.9 3.7 2.1 1 1 0 1 1 1 0 Zinc ribbon domain TFIIS_C PF01096.13 gi|407465244|ref|YP_006776126.1| - 3.7 7.2 5.9 13 5.5 0.3 2.1 1 1 2 3 3 3 0 Transcription factor S-II (TFIIS) QRPTase_C PF01729.14 gi|407465245|ref|YP_006776127.1| - 2.6e-54 183.2 1.7 3.4e-54 182.8 1.2 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 gi|407465245|ref|YP_006776127.1| - 4e-27 93.8 0.0 7.8e-27 92.9 0.0 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.14 gi|407465245|ref|YP_006776127.1| - 0.0013 17.8 0.2 0.0027 16.8 0.1 1.6 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family TMP-TENI PF02581.12 gi|407465245|ref|YP_006776127.1| - 0.023 13.8 0.1 0.038 13.1 0.1 1.3 1 0 0 1 1 1 0 Thiamine monophosphate synthase/TENI Spectrin PF00435.16 gi|407465245|ref|YP_006776127.1| - 0.1 12.8 1.5 0.23 11.7 0.5 1.8 2 0 0 2 2 2 0 Spectrin repeat TPR_11 PF13414.1 gi|407465246|ref|YP_006776128.1| - 8.3e-15 54.1 0.8 7.2e-12 44.7 0.1 2.1 1 1 1 2 2 2 2 TPR repeat TPR_1 PF00515.23 gi|407465246|ref|YP_006776128.1| - 3.4e-14 51.7 4.9 4.2e-06 26.1 0.1 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407465246|ref|YP_006776128.1| - 5e-13 47.8 0.9 0.00083 19.0 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|407465246|ref|YP_006776128.1| - 4.2e-10 39.6 7.6 7e-09 35.7 0.9 1.7 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.1 gi|407465246|ref|YP_006776128.1| - 1.7e-08 34.6 0.2 2.3e-06 27.8 0.2 2.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407465246|ref|YP_006776128.1| - 6.1e-08 32.2 1.6 0.019 15.1 0.1 3.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407465246|ref|YP_006776128.1| - 8.2e-08 32.0 0.1 4.1e-07 29.8 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407465246|ref|YP_006776128.1| - 1.7e-06 28.5 0.0 0.0026 18.3 0.0 2.2 1 1 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407465246|ref|YP_006776128.1| - 2.6e-06 26.8 5.9 0.039 13.7 0.1 3.4 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|407465246|ref|YP_006776128.1| - 8.2e-06 25.2 0.1 0.076 12.8 0.0 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|407465246|ref|YP_006776128.1| - 1.2e-05 25.1 1.2 0.0058 16.4 0.1 3.1 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.1 gi|407465246|ref|YP_006776128.1| - 3.9e-05 23.8 0.2 0.062 13.7 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407465246|ref|YP_006776128.1| - 0.00015 22.1 0.0 0.48 11.1 0.0 3.2 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_3 PF07720.7 gi|407465246|ref|YP_006776128.1| - 0.0045 16.7 6.3 0.0066 16.2 0.3 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat P4Ha_N PF08336.6 gi|407465246|ref|YP_006776128.1| - 0.011 15.5 0.1 0.02 14.7 0.0 1.4 1 0 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Prefoldin PF02996.12 gi|407465246|ref|YP_006776128.1| - 0.035 13.7 1.9 0.049 13.2 0.4 1.8 1 1 1 2 2 2 0 Prefoldin subunit TPR_9 PF13371.1 gi|407465246|ref|YP_006776128.1| - 0.046 13.5 0.0 0.29 10.9 0.0 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat Cas_Cas02710 PF09670.5 gi|407465246|ref|YP_006776128.1| - 0.062 11.9 0.4 0.079 11.5 0.3 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) NadA PF02445.11 gi|407465247|ref|YP_006776129.1| - 1.2e-115 385.3 3.2 1.4e-115 385.1 2.2 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein DUF108 PF01958.13 gi|407465248|ref|YP_006776130.1| - 2.7e-33 114.0 1.3 3.4e-33 113.7 0.2 1.7 2 0 0 2 2 2 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.11 gi|407465248|ref|YP_006776130.1| - 1.1e-15 58.0 0.0 1.7e-15 57.4 0.0 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|407465248|ref|YP_006776130.1| - 9.6e-05 22.2 0.0 0.00021 21.1 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.17 gi|407465248|ref|YP_006776130.1| - 0.0019 18.6 0.0 0.0043 17.5 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_2 PF03446.10 gi|407465248|ref|YP_006776130.1| - 0.0039 17.0 0.0 0.0072 16.1 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Semialdhyde_dh PF01118.19 gi|407465248|ref|YP_006776130.1| - 0.014 15.7 0.1 0.032 14.5 0.0 1.6 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|407465248|ref|YP_006776130.1| - 0.014 15.7 0.3 0.031 14.6 0.1 1.7 2 0 0 2 2 1 0 NADP oxidoreductase coenzyme F420-dependent ADH_zinc_N PF00107.21 gi|407465248|ref|YP_006776130.1| - 0.027 14.0 0.0 0.066 12.7 0.0 1.6 1 0 0 1 1 1 0 Zinc-binding dehydrogenase OCD_Mu_crystall PF02423.10 gi|407465248|ref|YP_006776130.1| - 0.039 12.7 0.0 0.056 12.2 0.0 1.3 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family 2-Hacid_dh_C PF02826.14 gi|407465248|ref|YP_006776130.1| - 0.055 12.6 0.2 0.23 10.5 0.0 2.0 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.13 gi|407465248|ref|YP_006776130.1| - 0.06 12.9 0.0 0.14 11.7 0.0 1.7 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain G5 PF07501.7 gi|407465248|ref|YP_006776130.1| - 0.064 13.2 0.1 0.18 11.8 0.0 1.7 1 0 0 1 1 1 0 G5 domain zf-RanBP PF00641.13 gi|407465249|ref|YP_006776131.1| - 0.0082 15.2 1.3 0.056 12.5 0.1 2.2 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others zf-Sec23_Sec24 PF04810.10 gi|407465249|ref|YP_006776131.1| - 0.015 14.8 2.4 0.096 12.2 0.0 2.5 3 0 0 3 3 3 0 Sec23/Sec24 zinc finger PhnA_Zn_Ribbon PF08274.7 gi|407465249|ref|YP_006776131.1| - 0.34 10.7 3.3 2.3 8.0 1.1 2.6 2 1 0 2 2 2 0 PhnA Zinc-Ribbon DUF2296 PF10058.4 gi|407465249|ref|YP_006776131.1| - 1.7 8.4 4.3 2 8.2 0.1 2.3 2 1 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) NurA PF09376.5 gi|407465252|ref|YP_006776134.1| - 1e-19 71.0 0.1 2.1e-19 70.0 0.0 1.6 2 0 0 2 2 2 1 NurA domain DUF87 PF01935.12 gi|407465253|ref|YP_006776135.1| - 1.7e-36 126.2 3.8 4.5e-36 124.8 2.6 1.7 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_10 PF12846.2 gi|407465253|ref|YP_006776135.1| - 1.1e-14 54.6 6.8 1.6e-10 40.9 1.8 2.1 1 1 0 2 2 2 2 AAA-like domain TrwB_AAD_bind PF10412.4 gi|407465253|ref|YP_006776135.1| - 0.0031 16.1 0.1 0.008 14.8 0.0 1.7 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain ABC_tran PF00005.22 gi|407465253|ref|YP_006776135.1| - 0.018 15.3 0.0 0.04 14.2 0.0 1.6 1 0 0 1 1 1 0 ABC transporter Metallophos_2 PF12850.2 gi|407465254|ref|YP_006776136.1| - 2e-10 40.7 0.2 4e-10 39.7 0.1 1.5 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|407465254|ref|YP_006776136.1| - 4.4e-09 36.0 1.9 8.1e-09 35.1 1.3 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase TRI5 PF06330.6 gi|407465254|ref|YP_006776136.1| - 0.094 11.3 0.1 0.3 9.6 0.1 1.7 2 0 0 2 2 2 0 Trichodiene synthase (TRI5) ATPgrasp_TupA PF14305.1 gi|407465255|ref|YP_006776137.1| - 0.015 14.5 0.7 0.023 14.0 0.5 1.2 1 0 0 1 1 1 0 TupA-like ATPgrasp DICT PF10069.4 gi|407465255|ref|YP_006776137.1| - 0.023 14.1 0.0 0.038 13.5 0.0 1.4 1 1 1 2 2 2 0 Sensory domain found in DIguanylate Cyclases & Two-component systems DUF2606 PF10794.4 gi|407465257|ref|YP_006776139.1| - 0.054 12.9 0.1 0.086 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) Copper-bind PF00127.15 gi|407465258|ref|YP_006776140.1| - 5.9e-17 61.7 0.9 3.6e-08 33.5 0.1 2.5 2 0 0 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 gi|407465258|ref|YP_006776140.1| - 7.1e-11 41.9 0.0 7.5e-05 22.5 0.0 2.9 2 2 0 2 2 2 2 Cupredoxin-like domain Kazal_2 PF07648.10 gi|407465258|ref|YP_006776140.1| - 4.8e-08 32.7 0.4 1.1e-07 31.6 0.3 1.7 1 0 0 1 1 1 1 Kazal-type serine protease inhibitor domain Kazal_1 PF00050.16 gi|407465258|ref|YP_006776140.1| - 8.8e-08 32.0 0.2 8.8e-08 32.0 0.1 2.0 2 0 0 2 2 2 1 Kazal-type serine protease inhibitor domain Trypan_PARP PF05887.6 gi|407465258|ref|YP_006776140.1| - 0.18 11.6 4.4 0.41 10.4 3.0 1.5 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) HEAT_2 PF13646.1 gi|407465259|ref|YP_006776141.1| - 2.4e-28 98.2 0.1 2.5e-20 72.5 0.1 2.1 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.17 gi|407465259|ref|YP_006776141.1| - 1.5e-15 55.7 0.0 0.0051 16.7 0.0 4.2 4 0 0 4 4 4 4 HEAT repeat HEAT_PBS PF03130.11 gi|407465259|ref|YP_006776141.1| - 2.5e-13 49.1 0.0 0.00011 22.3 0.1 3.6 4 0 0 4 4 4 2 PBS lyase HEAT-like repeat HEAT_EZ PF13513.1 gi|407465259|ref|YP_006776141.1| - 7.2e-13 48.6 0.0 0.025 15.0 0.0 3.9 4 0 0 4 4 4 3 HEAT-like repeat Arm PF00514.18 gi|407465259|ref|YP_006776141.1| - 0.0007 19.3 0.0 2.5 8.0 0.0 3.7 4 0 0 4 4 4 1 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.15 gi|407465259|ref|YP_006776141.1| - 0.0011 17.3 0.0 0.0021 16.4 0.0 1.4 1 1 0 1 1 1 1 Adaptin N terminal region Redoxin PF08534.5 gi|407465260|ref|YP_006776142.1| - 4e-08 32.9 0.1 3.2e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 Redoxin AhpC-TSA PF00578.16 gi|407465260|ref|YP_006776142.1| - 6.9e-08 32.2 0.2 1.6e-06 27.7 0.2 2.5 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_2 PF13098.1 gi|407465260|ref|YP_006776142.1| - 0.00041 20.5 0.4 0.006 16.7 0.3 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.1 gi|407465260|ref|YP_006776142.1| - 0.002 18.1 0.2 2.8 8.1 0.0 2.4 2 1 0 2 2 2 2 Thioredoxin-like GSHPx PF00255.14 gi|407465260|ref|YP_006776142.1| - 0.1 11.9 0.0 0.23 10.8 0.0 1.6 1 0 0 1 1 1 0 Glutathione peroxidase TMEM154 PF15102.1 gi|407465261|ref|YP_006776143.1| - 0.12 12.1 0.2 0.21 11.3 0.2 1.4 1 0 0 1 1 1 0 TMEM154 protein family Ribosomal_L15e PF00827.12 gi|407465262|ref|YP_006776144.1| - 6.1e-45 153.1 4.0 7.4e-45 152.8 2.7 1.0 1 0 0 1 1 1 1 Ribosomal L15 2-Hacid_dh_C PF02826.14 gi|407465267|ref|YP_006776149.1| - 3.4e-61 205.4 0.0 5.2e-61 204.8 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|407465267|ref|YP_006776149.1| - 1.3e-27 95.8 0.2 1.6e-27 95.6 0.2 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.10 gi|407465267|ref|YP_006776149.1| - 0.00067 19.5 0.3 0.0025 17.6 0.0 1.9 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Cu-oxidase_3 PF07732.10 gi|407465268|ref|YP_006776150.1| - 7.8e-08 32.0 1.4 4.2e-07 29.7 0.1 2.3 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_2 PF07731.9 gi|407465268|ref|YP_006776150.1| - 0.0013 18.2 1.8 0.19 11.2 0.2 2.7 2 1 0 2 2 2 2 Multicopper oxidase Lyase_1 PF00206.15 gi|407465269|ref|YP_006776151.1| - 1.2e-88 297.2 0.8 1.7e-88 296.7 0.5 1.2 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.4 gi|407465269|ref|YP_006776151.1| - 1e-12 47.9 0.0 2.3e-12 46.7 0.0 1.7 1 0 0 1 1 1 1 Fumarase C C-terminus Radical_SAM PF04055.16 gi|407465270|ref|YP_006776152.1| - 1.2e-17 64.5 0.1 1.9e-17 63.9 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily UPF0004 PF00919.15 gi|407465270|ref|YP_006776152.1| - 2.4e-16 59.3 0.6 5.8e-16 58.1 0.0 1.9 2 0 0 2 2 2 1 Uncharacterized protein family UPF0004 Tubulin PF00091.20 gi|407465271|ref|YP_006776153.1| - 2.4e-16 60.2 0.1 5.4e-14 52.5 0.0 2.3 1 1 1 2 2 2 2 Tubulin/FtsZ family, GTPase domain ThiF PF00899.16 gi|407465271|ref|YP_006776153.1| - 0.036 13.9 0.0 0.067 13.0 0.0 1.5 1 0 0 1 1 1 0 ThiF family Ribosomal_L31e PF01198.14 gi|407465272|ref|YP_006776154.1| - 5.8e-24 83.5 2.5 8.2e-24 83.0 1.7 1.4 1 1 0 1 1 1 1 Ribosomal protein L31e FeoB_N PF02421.13 gi|407465272|ref|YP_006776154.1| - 0.078 12.2 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B Ribosomal_L39 PF00832.15 gi|407465273|ref|YP_006776155.1| - 1.5e-18 65.9 6.9 1.7e-18 65.7 4.8 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein NUDIX PF00293.23 gi|407465274|ref|YP_006776156.1| - 1.5e-10 40.8 0.0 2.2e-10 40.3 0.0 1.3 1 1 0 1 1 1 1 NUDIX domain MTHFR PF02219.12 gi|407465275|ref|YP_006776157.1| - 0.015 14.3 0.0 0.029 13.4 0.0 1.5 1 1 0 1 1 1 0 Methylenetetrahydrofolate reductase Pterin_bind PF00809.17 gi|407465276|ref|YP_006776158.1| - 3.6e-22 78.7 0.0 6.1e-22 78.0 0.0 1.4 1 0 0 1 1 1 1 Pterin binding enzyme Met_synt_B12 PF02965.12 gi|407465276|ref|YP_006776158.1| - 9.1e-20 70.7 0.0 1.9e-19 69.6 0.0 1.5 1 0 0 1 1 1 1 Vitamin B12 dependent methionine synthase, activation domain B12-binding PF02310.14 gi|407465276|ref|YP_006776158.1| - 1e-17 64.1 0.0 2.2e-17 63.0 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|407465276|ref|YP_006776158.1| - 4.4e-14 52.2 0.0 1.2e-13 50.8 0.0 1.8 1 0 0 1 1 1 1 B12 binding domain CdhD PF03599.11 gi|407465276|ref|YP_006776158.1| - 0.00092 17.8 0.0 0.0017 16.9 0.0 1.4 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit S-methyl_trans PF02574.11 gi|407465277|ref|YP_006776159.1| - 3.5e-72 243.2 0.0 4e-72 243.1 0.0 1.0 1 0 0 1 1 1 1 Homocysteine S-methyltransferase MFS_1 PF07690.11 gi|407465278|ref|YP_006776160.1| - 8.6e-28 97.0 68.5 2.5e-24 85.6 21.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Cu-oxidase_2 PF07731.9 gi|407465279|ref|YP_006776161.1| - 4.1e-09 36.0 8.3 4.4e-09 35.9 1.1 3.9 4 0 0 4 4 4 1 Multicopper oxidase Cu-oxidase_3 PF07732.10 gi|407465279|ref|YP_006776161.1| - 6.9e-09 35.4 15.1 3e-06 26.9 1.5 4.2 3 1 0 3 3 3 2 Multicopper oxidase Copper-bind PF00127.15 gi|407465279|ref|YP_006776161.1| - 0.0054 16.9 2.4 2.7 8.2 0.1 3.5 4 0 0 4 4 4 2 Copper binding proteins, plastocyanin/azurin family BPD_transp_1 PF00528.17 gi|407465280|ref|YP_006776162.1| - 9.7e-22 77.3 15.7 1.8e-21 76.4 10.9 1.4 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.22 gi|407465281|ref|YP_006776163.1| - 1.4e-31 109.6 0.0 2.5e-31 108.7 0.0 1.4 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.1 gi|407465281|ref|YP_006776163.1| - 2e-12 47.6 0.0 2.3e-08 34.3 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|407465281|ref|YP_006776163.1| - 0.00039 19.5 0.0 0.049 12.6 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA PF00004.24 gi|407465281|ref|YP_006776163.1| - 0.00049 20.2 0.3 0.0057 16.8 0.2 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|407465281|ref|YP_006776163.1| - 0.00069 19.6 0.0 0.0014 18.6 0.0 1.6 2 0 0 2 2 2 1 AAA ATPase domain DUF258 PF03193.11 gi|407465281|ref|YP_006776163.1| - 0.002 17.3 0.0 0.0035 16.5 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function, DUF258 Arch_ATPase PF01637.13 gi|407465281|ref|YP_006776163.1| - 0.0022 17.7 0.0 0.0034 17.1 0.0 1.3 1 0 0 1 1 1 1 Archaeal ATPase AAA_17 PF13207.1 gi|407465281|ref|YP_006776163.1| - 0.0036 18.1 0.2 0.0068 17.2 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|407465281|ref|YP_006776163.1| - 0.0083 15.6 0.0 0.017 14.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|407465281|ref|YP_006776163.1| - 0.0096 16.0 0.0 0.035 14.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain Miro PF08477.8 gi|407465281|ref|YP_006776163.1| - 0.012 16.0 0.0 0.027 14.9 0.0 1.6 1 0 0 1 1 1 0 Miro-like protein AAA_33 PF13671.1 gi|407465281|ref|YP_006776163.1| - 0.013 15.3 0.0 0.023 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|407465281|ref|YP_006776163.1| - 0.015 14.7 0.0 0.033 13.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.14 gi|407465281|ref|YP_006776163.1| - 0.016 14.4 0.4 2.5 7.2 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain NACHT PF05729.7 gi|407465281|ref|YP_006776163.1| - 0.024 14.3 0.0 0.045 13.3 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.9 gi|407465281|ref|YP_006776163.1| - 0.026 14.2 0.0 0.052 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Rad17 PF03215.10 gi|407465281|ref|YP_006776163.1| - 0.047 12.3 0.0 0.07 11.8 0.0 1.2 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_18 PF13238.1 gi|407465281|ref|YP_006776163.1| - 0.047 13.9 0.0 0.085 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|407465281|ref|YP_006776163.1| - 0.068 13.3 0.0 0.17 12.0 0.0 1.7 1 0 0 1 1 1 0 RNA helicase UPF0079 PF02367.12 gi|407465281|ref|YP_006776163.1| - 0.083 12.5 0.2 0.26 10.9 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 AAA_28 PF13521.1 gi|407465281|ref|YP_006776163.1| - 0.13 12.2 0.0 0.21 11.5 0.0 1.6 1 1 0 1 1 1 0 AAA domain Arginosuc_synth PF00764.14 gi|407465282|ref|YP_006776164.1| - 8.9e-159 528.6 0.1 1e-158 528.4 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.16 gi|407465282|ref|YP_006776164.1| - 1.9e-06 27.5 0.0 2.9e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|407465282|ref|YP_006776164.1| - 0.0004 19.7 0.0 0.00069 18.9 0.0 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC zinc_ribbon_5 PF13719.1 gi|407465283|ref|YP_006776165.1| - 2.5e-06 26.9 0.7 0.024 14.2 0.1 2.1 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|407465283|ref|YP_006776165.1| - 5e-06 26.1 0.7 0.043 13.5 0.0 2.1 2 0 0 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|407465283|ref|YP_006776165.1| - 0.00048 19.2 1.0 0.49 9.6 0.0 2.2 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|407465283|ref|YP_006776165.1| - 0.00049 19.3 1.5 0.00078 18.7 1.0 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding DNA_RNApol_7kD PF03604.8 gi|407465283|ref|YP_006776165.1| - 0.00075 18.9 1.8 0.24 10.8 0.1 2.7 2 1 1 3 3 3 1 DNA directed RNA polymerase, 7 kDa subunit UPF0547 PF10571.4 gi|407465283|ref|YP_006776165.1| - 0.0014 18.2 3.6 0.012 15.2 2.5 2.0 1 1 0 1 1 1 1 Uncharacterised protein family UPF0547 RNA_POL_M_15KD PF02150.11 gi|407465283|ref|YP_006776165.1| - 0.0033 17.0 0.4 0.0051 16.4 0.3 1.3 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit DNA_ligase_ZBD PF03119.11 gi|407465283|ref|YP_006776165.1| - 0.0048 16.5 1.6 0.49 10.1 0.1 2.3 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain zf-HYPF PF07503.7 gi|407465283|ref|YP_006776165.1| - 0.005 16.2 2.0 0.17 11.3 0.0 2.1 2 0 0 2 2 2 1 HypF finger zf-TFIIB PF13453.1 gi|407465283|ref|YP_006776165.1| - 0.0058 15.7 1.8 0.12 11.5 2.2 1.9 1 1 1 2 2 2 2 Transcription factor zinc-finger DZR PF12773.2 gi|407465283|ref|YP_006776165.1| - 0.0087 15.8 0.6 0.015 15.1 0.4 1.5 1 1 0 1 1 1 1 Double zinc ribbon Lar_restr_allev PF14354.1 gi|407465283|ref|YP_006776165.1| - 0.0097 16.1 2.0 0.016 15.4 1.4 1.4 1 1 0 1 1 1 1 Restriction alleviation protein Lar zf-C4_Topoisom PF01396.14 gi|407465283|ref|YP_006776165.1| - 0.0097 15.3 1.4 1.7 8.2 0.0 2.2 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger HypA PF01155.14 gi|407465283|ref|YP_006776165.1| - 0.0097 15.5 0.3 0.011 15.4 0.2 1.1 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family Prok-RING_1 PF14446.1 gi|407465283|ref|YP_006776165.1| - 0.01 15.5 4.1 0.027 14.2 2.8 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 A2L_zn_ribbon PF08792.5 gi|407465283|ref|YP_006776165.1| - 0.011 15.1 1.1 1.5 8.3 0.1 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain Zn_Tnp_IS1 PF03811.8 gi|407465283|ref|YP_006776165.1| - 0.015 14.8 1.0 1.7 8.2 0.0 2.2 2 0 0 2 2 2 0 InsA N-terminal domain zinc_ribbon_2 PF13240.1 gi|407465283|ref|YP_006776165.1| - 0.015 14.7 0.4 0.087 12.3 0.3 2.1 1 1 0 1 1 1 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|407465283|ref|YP_006776165.1| - 0.019 14.6 0.1 0.027 14.1 0.1 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc-ribbons_6 PF07191.7 gi|407465283|ref|YP_006776165.1| - 0.022 14.5 0.7 0.057 13.2 0.5 1.7 1 1 0 1 1 1 0 zinc-ribbons Ogr_Delta PF04606.7 gi|407465283|ref|YP_006776165.1| - 0.022 14.3 0.5 2.4 7.9 0.0 2.1 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-IS66 PF13005.2 gi|407465283|ref|YP_006776165.1| - 0.025 14.5 1.4 2.5 8.1 0.2 2.3 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-RING_3 PF14369.1 gi|407465283|ref|YP_006776165.1| - 0.028 14.3 4.1 0.075 13.0 2.9 1.7 1 1 0 1 1 1 0 zinc-finger DUF2387 PF09526.5 gi|407465283|ref|YP_006776165.1| - 0.03 14.2 0.3 0.036 13.9 0.2 1.2 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) DUF164 PF02591.10 gi|407465283|ref|YP_006776165.1| - 0.045 13.5 0.7 1.4 8.8 0.1 2.4 3 0 0 3 3 2 0 Putative zinc ribbon domain DUF329 PF03884.9 gi|407465283|ref|YP_006776165.1| - 0.048 13.2 2.0 1.5 8.3 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF329) CpXC PF14353.1 gi|407465283|ref|YP_006776165.1| - 0.071 13.0 0.2 3.1 7.7 0.0 2.1 2 0 0 2 2 2 0 CpXC protein ADK_lid PF05191.9 gi|407465283|ref|YP_006776165.1| - 0.074 12.7 0.7 1.8 8.3 0.1 2.3 2 1 0 2 2 2 0 Adenylate kinase, active site lid zf-CSL PF05207.8 gi|407465283|ref|YP_006776165.1| - 0.096 12.2 2.6 0.13 11.7 0.1 2.0 1 1 1 2 2 2 0 CSL zinc finger PAAR_motif PF05488.8 gi|407465283|ref|YP_006776165.1| - 0.1 12.6 0.1 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 PAAR motif Zn-ribbon_8 PF09723.5 gi|407465283|ref|YP_006776165.1| - 0.11 12.4 3.8 0.6 10.1 2.7 1.9 1 1 0 1 1 1 0 Zinc ribbon domain TerY-C PF15616.1 gi|407465283|ref|YP_006776165.1| - 0.17 11.8 1.4 1.1 9.1 0.9 1.9 1 1 0 1 1 1 0 TerY-C metal binding domain PhnA_Zn_Ribbon PF08274.7 gi|407465283|ref|YP_006776165.1| - 0.21 11.4 3.9 3.2 7.6 0.0 2.2 1 1 1 2 2 2 0 PhnA Zinc-Ribbon Rubredoxin PF00301.15 gi|407465283|ref|YP_006776165.1| - 1.9 8.3 7.3 3.6 7.5 0.4 2.5 1 1 1 2 2 2 0 Rubredoxin RimK PF08443.6 gi|407465284|ref|YP_006776166.1| - 9.6e-45 152.4 0.0 1.2e-44 152.0 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.1 gi|407465284|ref|YP_006776166.1| - 1.4e-14 54.2 0.0 2.5e-14 53.4 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.11 gi|407465284|ref|YP_006776166.1| - 6e-10 38.5 0.0 7.9e-10 38.1 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|407465284|ref|YP_006776166.1| - 6.5e-10 38.2 0.0 9.8e-10 37.6 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.9 gi|407465284|ref|YP_006776166.1| - 1.5e-07 31.4 0.1 4.1e-07 29.9 0.1 1.7 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 gi|407465284|ref|YP_006776166.1| - 5.2e-07 29.1 0.0 4e-06 26.2 0.0 2.0 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|407465284|ref|YP_006776166.1| - 0.00016 21.2 0.0 0.00028 20.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPSase_L_D2 PF02786.12 gi|407465284|ref|YP_006776166.1| - 0.00077 18.8 0.0 0.003 16.8 0.0 1.9 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.8 gi|407465284|ref|YP_006776166.1| - 0.00098 18.5 0.0 0.33 10.3 0.0 2.3 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATPgrasp_YheCD PF14398.1 gi|407465284|ref|YP_006776166.1| - 0.0011 17.8 0.0 0.033 12.9 0.0 2.1 2 0 0 2 2 2 1 YheC/D like ATP-grasp ATP-grasp_5 PF13549.1 gi|407465284|ref|YP_006776166.1| - 0.0094 15.1 0.0 0.026 13.7 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.1 gi|407465284|ref|YP_006776166.1| - 0.1 11.6 0.1 0.58 9.1 0.0 2.1 2 1 0 2 2 2 0 Sugar-transfer associated ATP-grasp Semialdhyde_dh PF01118.19 gi|407465285|ref|YP_006776167.1| - 6.5e-36 123.2 0.0 1.1e-35 122.5 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|407465285|ref|YP_006776167.1| - 4.4e-18 65.7 0.0 7e-18 65.1 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.17 gi|407465285|ref|YP_006776167.1| - 6.2e-05 23.5 0.0 0.00011 22.6 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.15 gi|407465285|ref|YP_006776167.1| - 0.00012 21.9 0.0 0.00025 20.9 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Saccharop_dh PF03435.13 gi|407465285|ref|YP_006776167.1| - 0.00014 20.9 0.0 0.00017 20.7 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NAD_binding_10 PF13460.1 gi|407465285|ref|YP_006776167.1| - 0.041 13.8 0.0 0.094 12.7 0.0 1.6 1 0 0 1 1 1 0 NADH(P)-binding AA_kinase PF00696.23 gi|407465286|ref|YP_006776168.1| - 4.8e-35 121.2 2.4 5.4e-35 121.0 1.7 1.0 1 0 0 1 1 1 1 Amino acid kinase family Aminotran_3 PF00202.16 gi|407465287|ref|YP_006776169.1| - 7.8e-104 347.1 0.1 9.3e-104 346.9 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 gi|407465287|ref|YP_006776169.1| - 0.0012 17.9 0.0 0.0035 16.3 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II DUF2931 PF11153.3 gi|407465287|ref|YP_006776169.1| - 0.014 14.7 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) Aminotran_5 PF00266.14 gi|407465287|ref|YP_006776169.1| - 0.096 11.4 0.0 0.19 10.4 0.0 1.6 1 1 0 1 1 1 0 Aminotransferase class-V HTH_AsnC-type PF13404.1 gi|407465288|ref|YP_006776170.1| - 1.5e-12 46.8 0.0 2.9e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.16 gi|407465288|ref|YP_006776170.1| - 5.2e-12 45.3 0.3 7.2e-12 44.8 0.2 1.2 1 0 0 1 1 1 1 AsnC family HTH_24 PF13412.1 gi|407465288|ref|YP_006776170.1| - 1.2e-11 43.7 0.1 2e-11 43.0 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 gi|407465288|ref|YP_006776170.1| - 0.0024 17.4 0.1 0.0061 16.1 0.1 1.7 1 0 0 1 1 1 1 HTH domain ACT_4 PF13291.1 gi|407465288|ref|YP_006776170.1| - 0.0052 17.0 0.2 1.4 9.3 0.1 2.3 2 0 0 2 2 2 1 ACT domain HTH_Tnp_ISL3 PF13542.1 gi|407465288|ref|YP_006776170.1| - 0.0064 15.6 0.0 0.014 14.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 TrmB PF01978.14 gi|407465288|ref|YP_006776170.1| - 0.0077 15.9 0.4 0.17 11.6 0.1 2.2 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Mga PF05043.8 gi|407465288|ref|YP_006776170.1| - 0.008 16.4 0.0 0.013 15.7 0.0 1.4 1 0 0 1 1 1 1 Mga helix-turn-helix domain FeoC PF09012.5 gi|407465288|ref|YP_006776170.1| - 0.011 15.4 0.0 0.018 14.7 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator Sigma70_r4 PF04545.11 gi|407465288|ref|YP_006776170.1| - 0.012 14.8 0.0 0.031 13.5 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 MarR_2 PF12802.2 gi|407465288|ref|YP_006776170.1| - 0.014 15.0 0.0 0.022 14.3 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_5 PF01022.15 gi|407465288|ref|YP_006776170.1| - 0.018 14.6 0.0 0.092 12.4 0.0 2.0 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|407465288|ref|YP_006776170.1| - 0.022 15.0 0.1 0.084 13.2 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain DDRGK PF09756.4 gi|407465288|ref|YP_006776170.1| - 0.032 13.6 0.8 0.064 12.6 0.1 1.7 2 0 0 2 2 2 0 DDRGK domain MarR PF01047.17 gi|407465288|ref|YP_006776170.1| - 0.04 13.6 0.4 0.093 12.4 0.1 1.8 2 0 0 2 2 2 0 MarR family HTH_IclR PF09339.5 gi|407465288|ref|YP_006776170.1| - 0.059 12.9 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain NapD PF03927.8 gi|407465288|ref|YP_006776170.1| - 0.064 13.0 0.7 0.11 12.3 0.5 1.4 1 0 0 1 1 1 0 NapD protein DUF2774 PF11242.3 gi|407465288|ref|YP_006776170.1| - 0.069 13.1 0.0 0.37 10.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2774) HTH_DeoR PF08220.7 gi|407465288|ref|YP_006776170.1| - 0.071 12.6 0.1 0.17 11.4 0.0 1.7 2 0 0 2 2 1 0 DeoR-like helix-turn-helix domain DUF977 PF06163.6 gi|407465288|ref|YP_006776170.1| - 0.076 12.7 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) HTH_34 PF13601.1 gi|407465288|ref|YP_006776170.1| - 0.077 13.0 0.1 0.32 11.0 0.0 2.0 1 1 0 2 2 2 0 Winged helix DNA-binding domain HTH_9 PF08221.6 gi|407465288|ref|YP_006776170.1| - 0.086 12.7 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain GYD PF08734.6 gi|407465288|ref|YP_006776170.1| - 0.14 11.8 0.3 1.7 8.4 0.0 2.1 1 1 1 2 2 2 0 GYD domain HMGL-like PF00682.14 gi|407465289|ref|YP_006776171.1| - 7e-63 212.4 0.0 1e-62 211.9 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Radical_SAM PF04055.16 gi|407465289|ref|YP_006776171.1| - 0.068 13.3 0.1 0.3 11.2 0.1 2.1 1 1 0 1 1 1 0 Radical SAM superfamily DUF1629 PF07791.6 gi|407465289|ref|YP_006776171.1| - 0.13 12.1 0.0 20 5.0 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1629) zinc_ribbon_5 PF13719.1 gi|407465290|ref|YP_006776172.1| - 0.0001 21.7 0.6 0.0011 18.4 0.4 2.0 1 1 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|407465290|ref|YP_006776172.1| - 0.00021 20.9 0.8 0.0018 17.8 0.7 2.0 1 1 0 1 1 1 1 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.7 gi|407465290|ref|YP_006776172.1| - 0.00041 20.0 2.9 0.034 13.9 3.2 2.0 1 1 1 2 2 2 2 PhnA Zinc-Ribbon zf-C4_Topoisom PF01396.14 gi|407465290|ref|YP_006776172.1| - 0.00049 19.5 0.3 0.074 12.5 0.0 2.1 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.1 gi|407465290|ref|YP_006776172.1| - 0.00076 18.6 0.6 0.018 14.2 0.1 2.1 2 0 0 2 2 2 1 zinc-ribbon domain Prok-RING_1 PF14446.1 gi|407465290|ref|YP_006776172.1| - 0.0017 18.0 2.5 0.0041 16.8 1.7 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 Zn-ribbon_8 PF09723.5 gi|407465290|ref|YP_006776172.1| - 0.0032 17.3 1.1 0.0048 16.8 0.8 1.3 1 0 0 1 1 1 1 Zinc ribbon domain zf-RING_3 PF14369.1 gi|407465290|ref|YP_006776172.1| - 0.0035 17.3 1.3 0.0051 16.7 0.9 1.2 1 0 0 1 1 1 1 zinc-finger zf-HYPF PF07503.7 gi|407465290|ref|YP_006776172.1| - 0.0037 16.6 1.4 0.027 13.8 1.0 1.9 1 1 0 1 1 1 1 HypF finger A2L_zn_ribbon PF08792.5 gi|407465290|ref|YP_006776172.1| - 0.0062 15.9 1.0 0.07 12.6 0.1 2.1 2 0 0 2 2 2 1 A2L zinc ribbon domain HypA PF01155.14 gi|407465290|ref|YP_006776172.1| - 0.0098 15.5 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family UPF0547 PF10571.4 gi|407465290|ref|YP_006776172.1| - 0.021 14.5 1.3 0.47 10.1 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DNA_RNApol_7kD PF03604.8 gi|407465290|ref|YP_006776172.1| - 0.022 14.2 3.1 0.073 12.5 2.1 1.8 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.2 gi|407465290|ref|YP_006776172.1| - 0.026 14.3 1.0 0.053 13.3 0.7 1.5 1 1 0 1 1 1 0 Double zinc ribbon TerY-C PF15616.1 gi|407465290|ref|YP_006776172.1| - 0.034 14.0 0.3 0.041 13.8 0.2 1.4 1 1 0 1 1 1 0 TerY-C metal binding domain OrfB_Zn_ribbon PF07282.6 gi|407465290|ref|YP_006776172.1| - 0.038 13.6 0.4 0.052 13.2 0.3 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.1 gi|407465290|ref|YP_006776172.1| - 0.039 13.4 2.5 0.32 10.5 1.7 2.0 1 1 0 1 1 1 0 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|407465290|ref|YP_006776172.1| - 0.073 13.3 1.2 0.51 10.6 0.8 1.9 1 1 0 1 1 1 0 Restriction alleviation protein Lar zf-CSL PF05207.8 gi|407465290|ref|YP_006776172.1| - 0.076 12.5 1.2 0.098 12.1 0.9 1.2 1 0 0 1 1 1 0 CSL zinc finger zf-C2H2_6 PF13912.1 gi|407465290|ref|YP_006776172.1| - 0.1 12.5 1.1 0.68 9.9 0.0 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger PAAR_motif PF05488.8 gi|407465290|ref|YP_006776172.1| - 0.12 12.3 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 PAAR motif DUF164 PF02591.10 gi|407465290|ref|YP_006776172.1| - 0.16 11.8 3.2 0.96 9.3 2.2 2.0 1 1 0 1 1 1 0 Putative zinc ribbon domain DUF35_N PF12172.3 gi|407465290|ref|YP_006776172.1| - 0.16 11.8 0.5 4.1 7.4 0.0 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-IS66 PF13005.2 gi|407465290|ref|YP_006776172.1| - 0.18 11.8 2.1 0.91 9.5 0.2 2.4 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 BssC_TutF PF08201.6 gi|407465290|ref|YP_006776172.1| - 0.2 11.1 0.9 1.8 8.1 0.0 2.0 1 1 1 2 2 2 0 BssC/TutF protein CpXC PF14353.1 gi|407465290|ref|YP_006776172.1| - 0.22 11.4 1.4 0.99 9.3 0.1 2.0 1 1 1 2 2 2 0 CpXC protein DUF3797 PF12677.2 gi|407465290|ref|YP_006776172.1| - 0.3 10.7 1.7 0.88 9.2 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) TF_Zn_Ribbon PF08271.7 gi|407465290|ref|YP_006776172.1| - 0.37 10.1 3.6 0.7 9.2 2.5 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding zf-H2C2_2 PF13465.1 gi|407465290|ref|YP_006776172.1| - 0.53 10.6 2.4 1.4 9.3 0.0 2.0 2 0 0 2 2 2 0 Zinc-finger double domain DUF1272 PF06906.6 gi|407465290|ref|YP_006776172.1| - 0.56 10.1 4.5 14 5.5 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) RimK PF08443.6 gi|407465291|ref|YP_006776173.1| - 1.1e-43 148.9 0.0 1.6e-43 148.4 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.1 gi|407465291|ref|YP_006776173.1| - 6.9e-10 38.9 0.0 9.6e-10 38.4 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.11 gi|407465291|ref|YP_006776173.1| - 2.3e-08 33.3 0.0 3.1e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.9 gi|407465291|ref|YP_006776173.1| - 2.9e-08 33.7 0.0 4.6e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|407465291|ref|YP_006776173.1| - 2.7e-05 23.1 0.0 0.0001 21.1 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.12 gi|407465291|ref|YP_006776173.1| - 0.0012 18.1 0.0 0.0033 16.7 0.0 1.7 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.17 gi|407465291|ref|YP_006776173.1| - 0.0022 17.3 0.0 0.0034 16.7 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.1 gi|407465291|ref|YP_006776173.1| - 0.0095 15.1 0.0 0.02 14.0 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.5 gi|407465291|ref|YP_006776173.1| - 0.028 13.7 0.0 0.071 12.4 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain Peptidase_M20 PF01546.23 gi|407465292|ref|YP_006776174.1| - 1.5e-29 102.8 0.1 2e-29 102.4 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|407465292|ref|YP_006776174.1| - 6e-14 51.7 0.0 1.2e-13 50.7 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.9 gi|407465292|ref|YP_006776174.1| - 9.4e-06 24.5 0.6 0.042 12.6 0.1 2.6 2 1 1 3 3 3 2 M42 glutamyl aminopeptidase TP_methylase PF00590.15 gi|407465293|ref|YP_006776175.1| - 9.6e-20 71.1 0.0 1.2e-19 70.8 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.8 gi|407465294|ref|YP_006776176.1| - 1.1e-12 47.4 0.2 1.3e-12 47.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF357) Ala_racemase_C PF00842.16 gi|407465294|ref|YP_006776176.1| - 0.0075 15.6 0.0 0.0091 15.4 0.0 1.2 1 0 0 1 1 1 1 Alanine racemase, C-terminal domain CTP_transf_2 PF01467.21 gi|407465295|ref|YP_006776177.1| - 3.8e-14 53.0 0.1 6.8e-14 52.2 0.1 1.4 1 0 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|407465295|ref|YP_006776177.1| - 0.031 13.9 0.3 0.06 12.9 0.2 1.6 1 1 0 1 1 1 0 FAD synthetase Lactamase_B_3 PF13483.1 gi|407465295|ref|YP_006776177.1| - 0.078 12.6 0.1 0.17 11.6 0.0 1.5 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Corona_NS1 PF06145.6 gi|407465295|ref|YP_006776177.1| - 0.86 8.9 3.3 1.2 8.5 0.1 2.3 2 0 0 2 2 2 0 Coronavirus nonstructural protein NS1 CTP-dep_RFKase PF01982.11 gi|407465296|ref|YP_006776178.1| - 1.8e-43 147.0 0.1 2.7e-43 146.4 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 MarR PF01047.17 gi|407465296|ref|YP_006776178.1| - 0.015 14.9 0.1 0.034 13.8 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_36 PF13730.1 gi|407465296|ref|YP_006776178.1| - 0.038 14.1 1.0 0.11 12.6 0.7 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_34 PF13601.1 gi|407465296|ref|YP_006776178.1| - 0.054 13.5 0.3 0.13 12.3 0.2 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain EFG_II PF14492.1 gi|407465296|ref|YP_006776178.1| - 0.094 12.5 0.2 0.41 10.5 0.1 2.0 1 1 0 1 1 1 0 Elongation Factor G, domain II Toprim_4 PF13662.1 gi|407465297|ref|YP_006776179.1| - 2.4e-06 27.4 0.1 5.3e-06 26.3 0.1 1.7 1 0 0 1 1 1 1 Toprim domain Toprim PF01751.17 gi|407465297|ref|YP_006776179.1| - 0.0026 17.7 0.1 0.0069 16.3 0.1 1.8 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.1 gi|407465297|ref|YP_006776179.1| - 0.058 13.7 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 Toprim-like Copper-fist PF00649.13 gi|407465297|ref|YP_006776179.1| - 0.067 12.3 0.0 0.15 11.3 0.0 1.6 1 0 0 1 1 1 0 Copper fist DNA binding domain Fe-S_biosyn PF01521.15 gi|407465298|ref|YP_006776180.1| - 8.2e-23 80.4 0.0 9.2e-23 80.3 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis UPF0181 PF03701.9 gi|407465298|ref|YP_006776180.1| - 0.02 14.1 0.1 0.55 9.5 0.2 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0181) CBS PF00571.23 gi|407465299|ref|YP_006776181.1| - 1.2e-25 89.0 3.2 5.2e-13 48.5 0.1 2.1 2 0 0 2 2 2 2 CBS domain DUF2862 PF11061.3 gi|407465299|ref|YP_006776181.1| - 0.026 14.2 0.2 0.06 13.0 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2862) RHH_1 PF01402.16 gi|407465300|ref|YP_006776182.1| - 0.0017 18.1 0.1 0.0058 16.4 0.0 1.9 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family HicB PF05534.7 gi|407465300|ref|YP_006776182.1| - 0.012 15.2 0.1 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 HicB family TrmB PF01978.14 gi|407465301|ref|YP_006776183.1| - 0.00012 21.7 0.2 0.0002 20.9 0.1 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|407465301|ref|YP_006776183.1| - 0.00059 19.5 0.0 0.00081 19.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain FUR PF01475.14 gi|407465301|ref|YP_006776183.1| - 0.0007 19.5 0.1 0.00083 19.2 0.1 1.2 1 0 0 1 1 1 1 Ferric uptake regulator family Hpr_kinase_N PF02603.11 gi|407465301|ref|YP_006776183.1| - 0.0042 16.7 0.3 0.006 16.2 0.2 1.3 1 0 0 1 1 1 1 HPr Serine kinase N terminus DRTGG PF07085.7 gi|407465301|ref|YP_006776183.1| - 0.019 14.5 0.0 0.026 14.1 0.0 1.2 1 0 0 1 1 1 0 DRTGG domain HTH_IclR PF09339.5 gi|407465301|ref|YP_006776183.1| - 0.023 14.2 0.0 0.054 13.0 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain Copper-bind PF00127.15 gi|407465302|ref|YP_006776184.1| - 1.4e-09 38.0 0.0 2.3e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 gi|407465302|ref|YP_006776184.1| - 3.5e-06 26.8 0.0 7.5e-06 25.7 0.0 1.6 2 0 0 2 2 2 1 Cupredoxin-like domain ECH PF00378.15 gi|407465303|ref|YP_006776185.1| - 1.6e-72 243.6 2.1 1.8e-72 243.4 1.4 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family ECH_C PF13766.1 gi|407465303|ref|YP_006776185.1| - 0.0049 17.0 0.1 0.011 15.8 0.1 1.6 1 0 0 1 1 1 1 2-enoyl-CoA Hydratase C-terminal region ATP-grasp_5 PF13549.1 gi|407465304|ref|YP_006776186.1| - 1.1e-68 230.7 0.5 1.7e-68 230.1 0.3 1.3 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.1 gi|407465304|ref|YP_006776186.1| - 3.4e-48 162.7 0.2 8.4e-48 161.4 0.1 1.7 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|407465304|ref|YP_006776186.1| - 3.4e-26 91.7 0.1 1.5e-25 89.5 0.1 2.1 2 0 0 2 2 2 1 CoA binding domain CoA_binding PF02629.14 gi|407465304|ref|YP_006776186.1| - 2.8e-11 43.7 0.3 1.5e-10 41.4 0.2 2.4 1 0 0 1 1 1 1 CoA binding domain ATP-grasp_2 PF08442.5 gi|407465304|ref|YP_006776186.1| - 6.4e-08 32.2 0.5 1.4e-07 31.0 0.4 1.7 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|407465304|ref|YP_006776186.1| - 0.00038 20.2 0.0 0.00092 18.9 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain TPP_enzyme_M PF00205.17 gi|407465304|ref|YP_006776186.1| - 0.0019 17.9 0.4 2.9 7.6 0.0 3.9 4 0 0 4 4 4 1 Thiamine pyrophosphate enzyme, central domain RimK PF08443.6 gi|407465304|ref|YP_006776186.1| - 0.011 15.2 0.1 0.044 13.2 0.1 2.0 2 0 0 2 2 2 0 RimK-like ATP-grasp domain ATP-grasp PF02222.17 gi|407465304|ref|YP_006776186.1| - 0.092 12.0 0.0 0.23 10.7 0.0 1.7 1 0 0 1 1 1 0 ATP-grasp domain GATase PF00117.23 gi|407465305|ref|YP_006776187.1| - 5.9e-22 78.0 0.0 8.2e-22 77.5 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|407465305|ref|YP_006776187.1| - 3.8e-06 26.4 0.0 8e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 Peptidase C26 HTS PF04204.11 gi|407465305|ref|YP_006776187.1| - 0.0033 16.1 0.0 0.0075 15.0 0.0 1.5 2 0 0 2 2 2 1 Homoserine O-succinyltransferase DJ-1_PfpI PF01965.19 gi|407465305|ref|YP_006776187.1| - 0.054 12.9 0.0 0.077 12.4 0.0 1.2 1 0 0 1 1 1 0 DJ-1/PfpI family TRADD_N PF09034.5 gi|407465305|ref|YP_006776187.1| - 0.078 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 TRADD, N-terminal domain GATase_3 PF07685.9 gi|407465305|ref|YP_006776187.1| - 0.096 12.2 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Cactin_mid PF10312.4 gi|407465306|ref|YP_006776188.1| - 0.041 13.1 0.3 0.044 13.0 0.2 1.0 1 0 0 1 1 1 0 Conserved mid region of cactin Toprim_4 PF13662.1 gi|407465307|ref|YP_006776189.1| - 5.9e-06 26.2 0.0 1.2e-05 25.1 0.0 1.5 1 1 0 1 1 1 1 Toprim domain Toprim PF01751.17 gi|407465307|ref|YP_006776189.1| - 0.00052 19.9 0.1 0.0068 16.3 0.0 2.2 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.1 gi|407465307|ref|YP_006776189.1| - 0.071 13.4 0.0 0.087 13.1 0.0 1.3 1 0 0 1 1 1 0 Toprim-like Toprim_3 PF13362.1 gi|407465307|ref|YP_006776189.1| - 0.09 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Toprim domain ELFV_dehydrog PF00208.16 gi|407465308|ref|YP_006776190.1| - 2.1e-65 220.7 2.2 2.9e-65 220.2 1.5 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.13 gi|407465308|ref|YP_006776190.1| - 9.2e-48 161.1 0.2 1.9e-47 160.1 0.0 1.6 2 0 0 2 2 2 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HTH_5 PF01022.15 gi|407465309|ref|YP_006776191.1| - 9.7e-08 31.5 0.1 2.3e-07 30.3 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|407465309|ref|YP_006776191.1| - 6.2e-05 22.7 0.0 0.0001 21.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.1 gi|407465309|ref|YP_006776191.1| - 0.0016 18.4 0.5 0.024 14.6 0.1 2.3 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|407465309|ref|YP_006776191.1| - 0.0026 17.1 0.6 0.0072 15.6 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|407465309|ref|YP_006776191.1| - 0.01 15.4 0.0 0.022 14.4 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain B-block_TFIIIC PF04182.7 gi|407465309|ref|YP_006776191.1| - 0.011 15.5 2.4 0.013 15.3 0.2 2.1 2 1 0 2 2 2 0 B-block binding subunit of TFIIIC MarR PF01047.17 gi|407465309|ref|YP_006776191.1| - 0.014 15.0 0.2 1.9 8.2 0.0 3.0 3 0 0 3 3 3 0 MarR family TrmB PF01978.14 gi|407465309|ref|YP_006776191.1| - 0.02 14.5 0.0 0.043 13.5 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|407465309|ref|YP_006776191.1| - 0.024 14.4 0.2 0.024 14.4 0.2 2.0 3 0 0 3 3 3 0 Winged helix-turn-helix HTH_12 PF08461.5 gi|407465309|ref|YP_006776191.1| - 0.09 12.5 0.0 0.22 11.2 0.0 1.7 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_11 PF08279.7 gi|407465309|ref|YP_006776191.1| - 0.095 12.3 0.1 0.25 11.0 0.1 1.8 1 0 0 1 1 1 0 HTH domain GerE PF00196.14 gi|407465309|ref|YP_006776191.1| - 0.098 11.9 0.7 0.18 11.1 0.1 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_9 PF08221.6 gi|407465309|ref|YP_006776191.1| - 0.13 12.1 0.2 0.26 11.1 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Proteasome PF00227.21 gi|407465310|ref|YP_006776192.1| - 1.2e-48 164.9 1.3 1.5e-48 164.6 0.9 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.4 gi|407465310|ref|YP_006776192.1| - 6.8e-13 47.6 1.5 3.1e-11 42.3 0.1 2.5 2 0 0 2 2 2 2 Proteasome subunit A N-terminal signature DAZAP2 PF11029.3 gi|407465310|ref|YP_006776192.1| - 0.0053 17.2 0.4 0.012 16.0 0.1 1.8 1 1 1 2 2 2 1 DAZ associated protein 2 (DAZAP2) Synuclein PF01387.12 gi|407465310|ref|YP_006776192.1| - 0.16 11.8 3.9 0.2 11.5 0.3 2.5 3 0 0 3 3 3 0 Synuclein Ubie_methyltran PF01209.13 gi|407465311|ref|YP_006776193.1| - 7.2e-20 71.0 0.0 9.1e-20 70.7 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.7 gi|407465311|ref|YP_006776193.1| - 7.9e-14 51.9 0.0 1.2e-13 51.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407465311|ref|YP_006776193.1| - 8.7e-09 35.2 0.0 1.2e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|407465311|ref|YP_006776193.1| - 8.6e-08 31.9 0.0 2e-07 30.7 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|407465311|ref|YP_006776193.1| - 1e-07 32.5 0.0 2.3e-07 31.3 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|407465311|ref|YP_006776193.1| - 1.7e-06 28.3 0.0 2.4e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407465311|ref|YP_006776193.1| - 1.3e-05 25.6 0.0 2.4e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.10 gi|407465311|ref|YP_006776193.1| - 0.00052 19.7 0.0 0.00088 18.9 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_26 PF13659.1 gi|407465311|ref|YP_006776193.1| - 0.012 15.6 0.0 0.066 13.2 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain MTS PF05175.9 gi|407465311|ref|YP_006776193.1| - 0.043 13.2 0.0 0.096 12.0 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase small domain CMAS PF02353.15 gi|407465311|ref|YP_006776193.1| - 0.066 12.2 0.0 0.1 11.6 0.0 1.5 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase N2227 PF07942.7 gi|407465311|ref|YP_006776193.1| - 0.13 11.2 0.0 0.17 10.7 0.0 1.2 1 0 0 1 1 1 0 N2227-like protein MFS_1 PF07690.11 gi|407465312|ref|YP_006776194.1| - 1.1e-48 165.7 63.7 5.7e-35 120.6 23.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1228 PF06779.9 gi|407465312|ref|YP_006776194.1| - 0.46 10.5 10.5 0.17 11.9 0.6 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF1228) DUF983 PF06170.7 gi|407465312|ref|YP_006776194.1| - 1.3 9.2 0.0 1.3 9.2 0.0 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF983) P-II PF00543.17 gi|407465313|ref|YP_006776195.1| - 2.4e-17 63.2 2.2 4.1e-17 62.5 1.5 1.4 1 1 0 1 1 1 1 Nitrogen regulatory protein P-II MttA_Hcf106 PF02416.11 gi|407465314|ref|YP_006776196.1| - 2.3e-09 36.2 1.2 3.4e-09 35.6 0.8 1.6 1 1 0 1 1 1 1 mttA/Hcf106 family DUF948 PF06103.6 gi|407465314|ref|YP_006776196.1| - 0.059 13.2 0.0 0.077 12.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) VIT1 PF01988.14 gi|407465314|ref|YP_006776196.1| - 0.14 11.6 0.1 0.16 11.3 0.1 1.2 1 0 0 1 1 1 0 VIT family PRP1_N PF06424.7 gi|407465314|ref|YP_006776196.1| - 0.15 12.4 2.8 0.21 11.9 1.9 1.3 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal N6_N4_Mtase PF01555.13 gi|407465315|ref|YP_006776197.1| - 5.4e-37 127.4 4.3 6.5e-37 127.2 3.0 1.1 1 0 0 1 1 1 1 DNA methylase Methyltransf_26 PF13659.1 gi|407465315|ref|YP_006776197.1| - 3.7e-09 36.6 0.0 0.00082 19.3 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain N6_Mtase PF02384.11 gi|407465315|ref|YP_006776197.1| - 1.2e-06 27.8 0.1 0.00044 19.4 0.1 2.1 2 0 0 2 2 2 2 N-6 DNA Methylase UPF0020 PF01170.13 gi|407465315|ref|YP_006776197.1| - 1.5e-05 24.6 0.0 0.062 12.8 0.0 2.4 2 1 0 2 2 2 2 Putative RNA methylase family UPF0020 MethyltransfD12 PF02086.10 gi|407465315|ref|YP_006776197.1| - 0.0028 17.1 0.4 0.028 13.9 0.0 2.1 2 0 0 2 2 2 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_8 PF05148.10 gi|407465315|ref|YP_006776197.1| - 0.0087 15.7 0.1 0.59 9.7 0.0 2.3 2 0 0 2 2 2 1 Hypothetical methyltransferase Met_10 PF02475.11 gi|407465315|ref|YP_006776197.1| - 0.091 12.3 0.1 0.25 10.9 0.0 1.6 2 0 0 2 2 2 0 Met-10+ like-protein DEAD PF00270.24 gi|407465316|ref|YP_006776198.1| - 7.2e-32 110.1 0.4 3.6e-31 107.9 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|407465316|ref|YP_006776198.1| - 1.4e-14 53.7 0.9 2.8e-11 43.1 0.1 3.4 4 0 0 4 4 4 2 Helicase conserved C-terminal domain DUF1998 PF09369.5 gi|407465316|ref|YP_006776198.1| - 8.7e-12 45.4 0.1 2.3e-11 44.0 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) Elf1 PF05129.8 gi|407465316|ref|YP_006776198.1| - 0.01 15.5 1.3 0.033 13.8 0.9 1.9 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like SNF2_N PF00176.18 gi|407465316|ref|YP_006776198.1| - 0.012 14.4 0.1 0.021 13.6 0.1 1.3 1 0 0 1 1 1 0 SNF2 family N-terminal domain Zn-ribbon_8 PF09723.5 gi|407465316|ref|YP_006776198.1| - 1.6 8.7 8.4 0.13 12.2 1.2 2.5 2 1 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_4 PF13717.1 gi|407465316|ref|YP_006776198.1| - 6.3 6.5 14.4 1.1 9.0 4.1 3.1 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407465316|ref|YP_006776198.1| - 9.7 5.8 14.5 1.4 8.5 4.0 3.1 2 1 0 2 2 2 0 zinc-ribbon domain adh_short PF00106.20 gi|407465317|ref|YP_006776199.1| - 8.7e-33 113.5 0.0 1.1e-32 113.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|407465317|ref|YP_006776199.1| - 2.6e-21 76.5 0.0 3.2e-21 76.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|407465317|ref|YP_006776199.1| - 2.8e-12 46.6 0.0 4.1e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.5 gi|407465317|ref|YP_006776199.1| - 4.3e-05 22.8 0.0 0.00028 20.1 0.0 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) NmrA PF05368.8 gi|407465317|ref|YP_006776199.1| - 0.00022 20.5 0.3 0.0025 17.1 0.1 2.0 2 0 0 2 2 2 1 NmrA-like family Eno-Rase_NADH_b PF12242.3 gi|407465317|ref|YP_006776199.1| - 0.0045 16.7 0.1 0.0093 15.7 0.1 1.5 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NAD_binding_10 PF13460.1 gi|407465317|ref|YP_006776199.1| - 0.0092 16.0 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 gi|407465317|ref|YP_006776199.1| - 0.023 14.1 0.0 0.033 13.6 0.0 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Topoisom_I_N PF02919.10 gi|407465318|ref|YP_006776200.1| - 5.5e-72 241.5 8.7 5.5e-72 241.5 6.0 2.8 3 0 0 3 3 3 1 Eukaryotic DNA topoisomerase I, DNA binding fragment Topoisom_I PF01028.15 gi|407465318|ref|YP_006776200.1| - 3.5e-65 219.4 13.5 3.5e-65 219.4 9.4 2.1 1 1 1 2 2 2 1 Eukaryotic DNA topoisomerase I, catalytic core Topo_C_assoc PF14370.1 gi|407465318|ref|YP_006776200.1| - 8.1e-22 76.6 1.0 8.1e-22 76.6 0.7 3.8 4 0 0 4 4 4 1 C-terminal topoisomerase domain A2M_N PF01835.14 gi|407465319|ref|YP_006776201.1| - 0.0052 17.0 0.0 0.014 15.6 0.0 1.7 1 0 0 1 1 1 1 MG2 domain PLDc PF00614.17 gi|407465319|ref|YP_006776201.1| - 0.14 12.0 2.0 0.19 11.5 0.1 2.3 2 0 0 2 2 2 0 Phospholipase D Active site motif YMF19 PF02326.10 gi|407465319|ref|YP_006776201.1| - 1.7 9.3 6.4 0.36 11.4 1.2 2.4 3 0 0 3 3 3 0 Plant ATP synthase F0 TF_Zn_Ribbon PF08271.7 gi|407465320|ref|YP_006776202.1| - 0.17 11.2 3.8 0.44 9.9 2.7 1.8 1 0 0 1 1 1 0 TFIIB zinc-binding DUF4428 PF14471.1 gi|407465320|ref|YP_006776202.1| - 9.3 6.0 8.0 10 5.9 0.5 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4428) TFIIB PF00382.14 gi|407465321|ref|YP_006776203.1| - 3.5e-30 103.6 9.4 5.2e-17 61.4 0.2 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|407465321|ref|YP_006776203.1| - 2.7e-08 32.9 0.7 4.6e-08 32.2 0.5 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_11 PF08279.7 gi|407465321|ref|YP_006776203.1| - 0.0052 16.3 1.2 3.8 7.2 0.1 2.7 2 0 0 2 2 2 2 HTH domain Cyclin_N PF00134.18 gi|407465321|ref|YP_006776203.1| - 0.01 15.4 1.0 0.016 14.7 0.1 1.7 2 0 0 2 2 2 0 Cyclin, N-terminal domain DZR PF12773.2 gi|407465321|ref|YP_006776203.1| - 0.012 15.4 0.2 0.023 14.5 0.1 1.4 1 0 0 1 1 1 0 Double zinc ribbon RPW8 PF05659.6 gi|407465321|ref|YP_006776203.1| - 0.019 14.4 0.2 0.045 13.2 0.1 1.6 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Cyclin_C PF02984.14 gi|407465321|ref|YP_006776203.1| - 0.037 13.9 0.4 5.5 6.9 0.0 2.4 2 0 0 2 2 2 0 Cyclin, C-terminal domain GntR PF00392.16 gi|407465321|ref|YP_006776203.1| - 0.053 12.9 0.2 2.2 7.7 0.0 3.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family HTH_Mga PF08280.6 gi|407465321|ref|YP_006776203.1| - 0.12 12.1 0.9 1.8 8.3 0.0 2.9 4 0 0 4 4 4 0 M protein trans-acting positive regulator (MGA) HTH domain Baculo_ME53 PF06061.6 gi|407465321|ref|YP_006776203.1| - 0.32 9.9 2.0 0.69 8.8 0.9 1.7 2 0 0 2 2 2 0 Baculoviridae ME53 GerE PF00196.14 gi|407465321|ref|YP_006776203.1| - 0.87 8.9 4.7 2.4 7.5 0.1 3.5 3 0 0 3 3 3 0 Bacterial regulatory proteins, luxR family Tnp_zf-ribbon_2 PF13842.1 gi|407465322|ref|YP_006776204.1| - 0.00033 20.9 1.6 0.00035 20.9 1.1 1.1 1 0 0 1 1 1 1 DDE_Tnp_1-like zinc-ribbon Rubredoxin PF00301.15 gi|407465322|ref|YP_006776204.1| - 0.0019 18.0 0.8 0.13 12.1 0.1 2.1 2 0 0 2 2 2 1 Rubredoxin OrfB_Zn_ribbon PF07282.6 gi|407465322|ref|YP_006776204.1| - 0.0032 17.0 2.9 0.0034 16.9 2.0 1.0 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn_Tnp_IS1595 PF12760.2 gi|407465322|ref|YP_006776204.1| - 0.012 15.4 2.0 0.014 15.2 1.4 1.1 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|407465322|ref|YP_006776204.1| - 0.019 14.9 2.2 0.026 14.4 1.5 1.3 1 0 0 1 1 1 0 Zinc ribbon domain Ima1_N PF09779.4 gi|407465322|ref|YP_006776204.1| - 0.028 14.9 2.3 0.029 14.8 1.6 1.1 1 0 0 1 1 1 0 Ima1 N-terminal domain DUF2318 PF10080.4 gi|407465322|ref|YP_006776204.1| - 0.037 13.7 1.6 0.042 13.6 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) A2L_zn_ribbon PF08792.5 gi|407465322|ref|YP_006776204.1| - 0.041 13.3 5.3 0.31 10.5 0.3 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-BED PF02892.10 gi|407465322|ref|YP_006776204.1| - 0.062 13.0 4.2 0.093 12.5 0.1 2.0 1 1 1 2 2 2 0 BED zinc finger FYVE PF01363.16 gi|407465322|ref|YP_006776204.1| - 0.072 12.9 0.8 0.079 12.8 0.6 1.1 1 0 0 1 1 1 0 FYVE zinc finger DZR PF12773.2 gi|407465322|ref|YP_006776204.1| - 0.09 12.6 3.0 0.19 11.5 2.1 1.5 1 1 0 1 1 1 0 Double zinc ribbon C1_1 PF00130.17 gi|407465322|ref|YP_006776204.1| - 0.096 12.4 2.3 0.14 11.9 1.6 1.3 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) HypA PF01155.14 gi|407465322|ref|YP_006776204.1| - 0.11 12.1 2.0 0.11 12.1 1.4 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family YhfH PF14149.1 gi|407465322|ref|YP_006776204.1| - 0.11 12.2 0.5 0.11 12.2 0.3 1.7 2 0 0 2 2 2 0 YhfH-like protein zf-Mss51 PF13824.1 gi|407465322|ref|YP_006776204.1| - 0.13 12.1 0.7 0.15 11.9 0.5 1.3 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-CHY PF05495.7 gi|407465322|ref|YP_006776204.1| - 0.14 12.3 2.9 0.16 12.1 2.0 1.1 1 0 0 1 1 1 0 CHY zinc finger DUF4428 PF14471.1 gi|407465322|ref|YP_006776204.1| - 0.14 11.8 1.9 0.16 11.7 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) zf-FPG_IleRS PF06827.9 gi|407465322|ref|YP_006776204.1| - 0.23 11.1 1.7 0.92 9.2 0.1 2.1 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Desulfoferrod_N PF06397.7 gi|407465322|ref|YP_006776204.1| - 0.26 10.6 1.7 1.1 8.6 0.0 2.0 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Prok-RING_1 PF14446.1 gi|407465322|ref|YP_006776204.1| - 0.28 10.9 4.6 1.5 8.5 0.2 1.9 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 C1_2 PF03107.11 gi|407465322|ref|YP_006776204.1| - 0.5 10.5 3.2 3.5 7.8 0.2 2.1 2 0 0 2 2 2 0 C1 domain Rep_fac-A_C PF08646.5 gi|407465322|ref|YP_006776204.1| - 0.53 9.9 3.3 0.63 9.7 2.3 1.1 1 0 0 1 1 1 0 Replication factor-A C terminal domain zf-trcl PF13451.1 gi|407465322|ref|YP_006776204.1| - 0.61 9.7 3.9 9.5 5.9 0.2 2.1 2 0 0 2 2 2 0 Probable zinc-binding domain zf-RanBP PF00641.13 gi|407465322|ref|YP_006776204.1| - 1.4 8.1 9.9 0.36 9.9 1.6 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others PHD PF00628.24 gi|407465322|ref|YP_006776204.1| - 2 8.1 6.5 14 5.4 4.5 1.9 1 1 0 1 1 1 0 PHD-finger zinc_ribbon_4 PF13717.1 gi|407465322|ref|YP_006776204.1| - 2.1 8.1 5.8 17 5.1 4.0 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zf-met PF12874.2 gi|407465322|ref|YP_006776204.1| - 2.1 8.6 4.9 6.5 7.1 0.4 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zinc_ribbon_5 PF13719.1 gi|407465322|ref|YP_006776204.1| - 2.3 7.9 5.8 23 4.6 4.0 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zf-Sec23_Sec24 PF04810.10 gi|407465322|ref|YP_006776204.1| - 3.7 7.2 5.0 13 5.4 3.4 1.8 1 1 0 1 1 1 0 Sec23/Sec24 zinc finger RecR PF02132.10 gi|407465322|ref|YP_006776204.1| - 6.9 6.2 6.8 11 5.5 0.4 2.2 1 1 0 2 2 2 0 RecR protein zinc_ribbon_6 PF14599.1 gi|407465323|ref|YP_006776205.1| - 0.04 13.7 3.2 0.08 12.7 2.2 1.6 1 1 0 1 1 1 0 Zinc-ribbon DNA_RNApol_7kD PF03604.8 gi|407465323|ref|YP_006776205.1| - 0.14 11.6 4.3 0.52 9.8 3.0 2.0 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit UCR_hinge PF02320.11 gi|407465324|ref|YP_006776206.1| - 0.004 17.0 0.6 0.0058 16.5 0.4 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein IncA PF04156.9 gi|407465324|ref|YP_006776206.1| - 0.0044 16.6 0.1 0.0055 16.3 0.1 1.0 1 0 0 1 1 1 1 IncA protein FtsH_ext PF06480.10 gi|407465324|ref|YP_006776206.1| - 0.0059 16.7 0.1 0.0067 16.5 0.1 1.1 1 0 0 1 1 1 1 FtsH Extracellular ABC2_membrane_3 PF12698.2 gi|407465324|ref|YP_006776206.1| - 0.057 12.4 0.0 0.057 12.4 0.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF3139 PF11337.3 gi|407465324|ref|YP_006776206.1| - 0.081 13.2 0.1 0.097 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) DUF4363 PF14276.1 gi|407465324|ref|YP_006776206.1| - 1.8 8.2 4.9 5.1 6.8 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4363) DUF4377 PF14302.1 gi|407465325|ref|YP_006776207.1| - 1.7e-25 88.7 0.6 3.2e-25 87.8 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4377) Kazal_1 PF00050.16 gi|407465325|ref|YP_006776207.1| - 0.002 18.1 6.0 0.0054 16.7 4.2 1.8 1 0 0 1 1 1 1 Kazal-type serine protease inhibitor domain Kazal_2 PF07648.10 gi|407465325|ref|YP_006776207.1| - 0.008 16.0 3.3 0.09 12.7 2.3 2.5 1 1 0 1 1 1 1 Kazal-type serine protease inhibitor domain tRNA-synt_1f PF01921.13 gi|407465325|ref|YP_006776207.1| - 0.041 12.5 0.5 0.063 11.9 0.3 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (K) DUF401 PF04165.7 gi|407465326|ref|YP_006776208.1| - 0.14 11.1 0.1 0.16 10.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF401) SDF PF00375.13 gi|407465327|ref|YP_006776209.1| - 7.2e-116 387.1 44.2 8.1e-116 386.9 30.6 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family AsnC_trans_reg PF01037.16 gi|407465328|ref|YP_006776210.1| - 1.9e-12 46.6 0.0 2.2e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 AsnC family ACT_4 PF13291.1 gi|407465328|ref|YP_006776210.1| - 0.039 14.2 0.0 11 6.4 0.0 2.1 2 0 0 2 2 2 0 ACT domain SHOCT PF09851.4 gi|407465330|ref|YP_006776212.1| - 1.3e-06 27.6 6.4 3e-06 26.4 4.5 1.6 1 0 0 1 1 1 1 Short C-terminal domain Gp-FAR-1 PF05823.7 gi|407465330|ref|YP_006776212.1| - 0.091 12.7 8.6 0.038 13.9 3.5 2.2 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) PRC PF05239.11 gi|407465331|ref|YP_006776213.1| - 1.7e-10 40.6 2.5 3.9e-05 23.4 2.0 2.1 2 0 0 2 2 2 2 PRC-barrel domain MCE PF02470.15 gi|407465331|ref|YP_006776213.1| - 0.0051 16.7 0.5 0.04 13.9 0.3 2.0 1 1 1 2 2 2 1 mce related protein DUF3659 PF12396.3 gi|407465331|ref|YP_006776213.1| - 0.058 13.0 0.2 1.8 8.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) TraE PF05309.6 gi|407465331|ref|YP_006776213.1| - 0.12 11.5 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 TraE protein FGase PF05013.7 gi|407465332|ref|YP_006776214.1| - 1.1e-46 159.4 0.0 1.3e-46 159.2 0.0 1.0 1 0 0 1 1 1 1 N-formylglutamate amidohydrolase G_glu_transpept PF01019.16 gi|407465333|ref|YP_006776215.1| - 4.8e-113 378.3 0.0 5.5e-113 378.1 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase Asparaginase_2 PF01112.13 gi|407465333|ref|YP_006776215.1| - 0.075 11.7 0.1 0.13 11.0 0.0 1.3 1 0 0 1 1 1 0 Asparaginase Ion_trans PF00520.26 gi|407465334|ref|YP_006776216.1| - 2e-20 72.9 9.9 2e-20 72.9 6.8 1.7 2 0 0 2 2 2 1 Ion transport protein Ion_trans_2 PF07885.11 gi|407465334|ref|YP_006776216.1| - 2.9e-13 49.3 8.3 4.2e-13 48.7 3.4 2.5 2 0 0 2 2 2 1 Ion channel PKD_channel PF08016.7 gi|407465334|ref|YP_006776216.1| - 0.032 12.6 0.2 0.032 12.6 0.1 1.6 1 1 0 2 2 2 0 Polycystin cation channel zinc_ribbon_2 PF13240.1 gi|407465334|ref|YP_006776216.1| - 0.054 12.9 0.4 0.1 12.1 0.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Lig_chan PF00060.21 gi|407465334|ref|YP_006776216.1| - 1.4 8.6 4.1 0.63 9.7 0.1 2.0 2 0 0 2 2 2 0 Ligand-gated ion channel DUF983 PF06170.7 gi|407465334|ref|YP_006776216.1| - 2.1 8.5 11.0 1.8 8.7 0.2 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF983) CorA PF01544.13 gi|407465335|ref|YP_006776217.1| - 3.4e-72 242.9 5.2 3.4e-72 242.9 3.6 2.3 2 0 0 2 2 2 1 CorA-like Mg2+ transporter protein T2SF PF00482.18 gi|407465335|ref|YP_006776217.1| - 0.2 11.5 0.0 0.2 11.5 0.0 3.0 5 0 0 5 5 5 0 Type II secretion system (T2SS), protein F Herpes_UL92 PF03048.9 gi|407465335|ref|YP_006776217.1| - 0.45 10.0 4.7 1.3 8.5 0.1 2.7 1 1 0 2 2 2 0 UL92 family Dala_Dala_lig_C PF07478.8 gi|407465336|ref|YP_006776218.1| - 6.8e-34 117.0 0.0 1.2e-33 116.2 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_4 PF13535.1 gi|407465336|ref|YP_006776218.1| - 7.9e-19 68.1 0.0 2.2e-18 66.6 0.0 1.7 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|407465336|ref|YP_006776218.1| - 4.5e-11 42.8 0.2 1.1e-10 41.6 0.0 1.7 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|407465336|ref|YP_006776218.1| - 5.2e-11 41.8 0.1 3.1e-10 39.2 0.0 2.2 2 1 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon RimK PF08443.6 gi|407465336|ref|YP_006776218.1| - 3e-08 33.3 0.1 6.4e-07 29.0 0.1 2.3 1 1 0 1 1 1 1 RimK-like ATP-grasp domain CPSase_L_D2 PF02786.12 gi|407465336|ref|YP_006776218.1| - 3.6e-08 32.9 0.0 6.6e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Peptidase_M20 PF01546.23 gi|407465336|ref|YP_006776218.1| - 2.3e-07 30.4 0.0 5e-07 29.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 GARS_A PF01071.14 gi|407465336|ref|YP_006776218.1| - 0.00043 19.9 0.0 0.00085 18.9 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Dala_Dala_lig_N PF01820.16 gi|407465336|ref|YP_006776218.1| - 0.025 14.8 0.2 1.1 9.5 0.1 2.8 1 1 0 1 1 1 0 D-ala D-ala ligase N-terminus Alpha-2-MRAP_C PF06401.6 gi|407465336|ref|YP_006776218.1| - 1.3 8.8 5.7 0.28 11.0 1.1 2.0 2 0 0 2 2 2 0 Alpha-2-macroglobulin RAP, C-terminal domain Amidohydro_2 PF04909.9 gi|407465337|ref|YP_006776219.1| - 2.2e-35 122.5 0.0 2.7e-35 122.2 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.16 gi|407465337|ref|YP_006776219.1| - 0.00023 20.4 0.0 0.00033 19.9 0.0 1.3 1 0 0 1 1 1 1 TatD related DNase Acetyltransf_1 PF00583.19 gi|407465338|ref|YP_006776220.1| - 2.6e-09 36.9 0.0 4.3e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.1 gi|407465338|ref|YP_006776220.1| - 0.00014 21.6 0.0 0.66 9.8 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|407465338|ref|YP_006776220.1| - 0.0035 17.4 0.0 0.013 15.5 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|407465338|ref|YP_006776220.1| - 0.022 14.8 0.0 0.048 13.8 0.0 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|407465338|ref|YP_006776220.1| - 0.11 12.6 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain TBPIP PF07106.8 gi|407465341|ref|YP_006776223.1| - 0.011 15.2 1.6 0.011 15.2 1.1 2.5 2 0 0 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) V-SNARE PF05008.10 gi|407465341|ref|YP_006776223.1| - 0.073 13.2 0.2 0.073 13.2 0.1 2.9 2 2 1 3 3 3 0 Vesicle transport v-SNARE protein N-terminus Spectrin PF00435.16 gi|407465341|ref|YP_006776223.1| - 0.24 11.7 6.1 0.59 10.4 0.3 2.4 2 0 0 2 2 2 0 Spectrin repeat DUF2730 PF10805.3 gi|407465341|ref|YP_006776223.1| - 0.29 10.8 4.0 0.2 11.4 0.3 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2730) SlyX PF04102.7 gi|407465341|ref|YP_006776223.1| - 0.3 11.4 4.2 5.4 7.4 0.2 2.9 2 1 0 2 2 2 0 SlyX Cob_adeno_trans PF01923.13 gi|407465341|ref|YP_006776223.1| - 0.34 10.6 3.3 2.8 7.7 0.1 2.3 2 0 0 2 2 2 0 Cobalamin adenosyltransferase WEMBL PF05701.6 gi|407465341|ref|YP_006776223.1| - 0.41 9.0 10.1 0.11 10.9 0.4 2.1 2 0 0 2 2 2 0 Weak chloroplast movement under blue light CENP-Q PF13094.1 gi|407465341|ref|YP_006776223.1| - 0.99 9.4 6.9 2.8 7.9 1.4 2.4 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit NPV_P10 PF05531.7 gi|407465341|ref|YP_006776223.1| - 1.6 9.0 9.8 1.4 9.2 0.7 3.9 2 2 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Cep57_CLD_2 PF14197.1 gi|407465341|ref|YP_006776223.1| - 1.8 8.5 7.2 2 8.3 0.2 2.5 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 FlaC_arch PF05377.6 gi|407465341|ref|YP_006776223.1| - 1.9 8.4 12.3 0.53 10.2 0.2 4.0 4 0 0 4 4 4 0 Flagella accessory protein C (FlaC) Med9 PF07544.8 gi|407465341|ref|YP_006776223.1| - 2.4 7.9 11.2 0.24 11.1 0.1 3.8 2 2 1 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 FlxA PF14282.1 gi|407465341|ref|YP_006776223.1| - 3.4 7.6 15.8 0.65 9.9 0.9 2.6 2 0 0 2 2 2 0 FlxA-like protein Cortex-I_coil PF09304.5 gi|407465341|ref|YP_006776223.1| - 3.7 7.6 13.3 4.5 7.3 3.3 2.8 2 1 0 2 2 2 0 Cortexillin I, coiled coil YgaB PF14182.1 gi|407465341|ref|YP_006776223.1| - 6.1 7.1 7.9 0.58 10.4 0.6 2.7 2 1 1 3 3 3 0 YgaB-like protein FlxA PF14282.1 gi|407465342|ref|YP_006776224.1| - 0.00075 19.4 13.5 0.011 15.6 0.7 3.4 2 1 1 3 3 3 1 FlxA-like protein NPV_P10 PF05531.7 gi|407465342|ref|YP_006776224.1| - 0.004 17.3 8.2 0.049 13.8 0.6 3.4 2 1 1 3 3 3 1 Nucleopolyhedrovirus P10 protein IncA PF04156.9 gi|407465342|ref|YP_006776224.1| - 0.007 15.9 7.3 0.76 9.3 0.4 3.4 3 1 0 3 3 3 2 IncA protein DUF4140 PF13600.1 gi|407465342|ref|YP_006776224.1| - 0.0097 16.3 6.1 0.31 11.4 0.1 3.6 2 2 1 3 3 2 1 N-terminal domain of unknown function (DUF4140) Med9 PF07544.8 gi|407465342|ref|YP_006776224.1| - 0.0098 15.6 5.1 0.075 12.7 0.6 3.0 2 1 1 3 3 3 1 RNA polymerase II transcription mediator complex subunit 9 DUF4094 PF13334.1 gi|407465342|ref|YP_006776224.1| - 0.02 15.2 1.2 8.1 6.9 0.1 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) Ax_dynein_light PF10211.4 gi|407465342|ref|YP_006776224.1| - 0.035 13.9 4.2 0.36 10.6 0.6 2.4 2 0 0 2 2 2 0 Axonemal dynein light chain CorA PF01544.13 gi|407465342|ref|YP_006776224.1| - 0.046 12.7 0.9 0.37 9.7 0.0 2.1 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein TBPIP PF07106.8 gi|407465342|ref|YP_006776224.1| - 0.077 12.5 15.9 0.1 12.1 1.9 2.6 3 0 0 3 3 3 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) EzrA PF06160.7 gi|407465342|ref|YP_006776224.1| - 0.087 10.9 5.7 0.036 12.2 0.6 2.0 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA DUF972 PF06156.8 gi|407465342|ref|YP_006776224.1| - 0.093 13.0 5.4 1.3 9.3 0.4 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF972) Filament PF00038.16 gi|407465342|ref|YP_006776224.1| - 0.099 12.0 3.3 2.4 7.5 0.3 2.3 2 0 0 2 2 2 0 Intermediate filament protein Med4 PF10018.4 gi|407465342|ref|YP_006776224.1| - 0.11 11.8 4.5 0.22 10.8 0.5 2.4 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Cob_adeno_trans PF01923.13 gi|407465342|ref|YP_006776224.1| - 0.17 11.6 0.6 7.3 6.3 0.0 2.4 2 0 0 2 2 2 0 Cobalamin adenosyltransferase Syntaxin-6_N PF09177.6 gi|407465342|ref|YP_006776224.1| - 0.17 12.3 1.3 8.6 6.8 0.0 2.8 2 0 0 2 2 2 0 Syntaxin 6, N-terminal Atg14 PF10186.4 gi|407465342|ref|YP_006776224.1| - 0.2 10.5 8.5 1.1 8.1 0.2 2.6 3 0 0 3 3 3 0 UV radiation resistance protein and autophagy-related subunit 14 FlaC_arch PF05377.6 gi|407465342|ref|YP_006776224.1| - 0.23 11.3 7.1 4.3 7.3 0.0 3.8 3 1 0 4 4 4 0 Flagella accessory protein C (FlaC) Allexi_40kDa PF05549.6 gi|407465342|ref|YP_006776224.1| - 0.25 10.5 2.9 3 7.0 0.1 2.4 2 0 0 2 2 2 0 Allexivirus 40kDa protein NIT PF08376.5 gi|407465342|ref|YP_006776224.1| - 0.29 10.5 1.8 16 4.9 0.1 2.2 2 0 0 2 2 2 0 Nitrate and nitrite sensing CENP-Q PF13094.1 gi|407465342|ref|YP_006776224.1| - 0.39 10.7 5.3 3 7.8 0.5 2.8 2 1 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit COG2 PF06148.6 gi|407465342|ref|YP_006776224.1| - 0.41 10.5 7.8 1.8 8.4 1.1 2.9 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Mnd1 PF03962.10 gi|407465342|ref|YP_006776224.1| - 0.51 9.9 9.6 0.28 10.8 0.4 2.7 3 0 0 3 3 3 0 Mnd1 family Tropomyosin_1 PF12718.2 gi|407465342|ref|YP_006776224.1| - 0.72 9.6 12.0 0.21 11.4 0.2 2.6 3 0 0 3 3 2 0 Tropomyosin like DUF342 PF03961.8 gi|407465342|ref|YP_006776224.1| - 1.7 6.9 12.5 0.67 8.2 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF342) Cytochrom_B562 PF07361.6 gi|407465342|ref|YP_006776224.1| - 1.8 9.0 6.1 0.79 10.1 0.2 2.7 3 0 0 3 3 2 0 Cytochrome b562 Vps51 PF08700.6 gi|407465342|ref|YP_006776224.1| - 2.8 7.8 9.8 8.7 6.2 0.2 4.0 4 0 0 4 4 4 0 Vps51/Vps67 XhlA PF10779.4 gi|407465342|ref|YP_006776224.1| - 3.1 7.7 11.7 5 7.1 0.0 3.2 4 0 0 4 4 3 0 Haemolysin XhlA Phage_GP20 PF06810.6 gi|407465342|ref|YP_006776224.1| - 3.8 6.9 15.1 0.37 10.2 0.2 3.2 3 1 1 4 4 4 0 Phage minor structural protein GP20 Prefoldin_2 PF01920.15 gi|407465342|ref|YP_006776224.1| - 4.2 7.1 16.5 1.9 8.2 0.1 4.1 4 1 1 5 5 5 0 Prefoldin subunit Spc24 PF08286.6 gi|407465342|ref|YP_006776224.1| - 8.6 6.0 10.8 7 6.3 0.4 3.1 3 0 0 3 3 3 0 Spc24 subunit of Ndc80 TMF_DNA_bd PF12329.3 gi|407465342|ref|YP_006776224.1| - 9.9 6.0 23.9 0.27 11.0 0.5 4.6 3 2 1 4 4 4 0 TATA element modulatory factor 1 DNA binding Sigma70_r4_2 PF08281.7 gi|407465343|ref|YP_006776225.1| - 0.0019 17.6 0.1 0.0043 16.4 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.1 gi|407465343|ref|YP_006776225.1| - 0.0082 15.5 0.8 0.019 14.3 0.6 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Na_H_Exchanger PF00999.16 gi|407465344|ref|YP_006776226.1| - 5.6e-59 199.5 53.3 7.1e-59 199.2 37.0 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CBS PF00571.23 gi|407465344|ref|YP_006776226.1| - 1.5e-12 47.1 0.4 2.9e-09 36.5 0.1 2.6 2 0 0 2 2 2 2 CBS domain TrmB PF01978.14 gi|407465345|ref|YP_006776227.1| - 0.0043 16.7 0.0 0.0075 15.9 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB z-alpha PF02295.12 gi|407465345|ref|YP_006776227.1| - 0.01 15.5 0.2 0.016 14.9 0.2 1.3 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain HTH_34 PF13601.1 gi|407465345|ref|YP_006776227.1| - 0.013 15.5 0.2 0.023 14.7 0.0 1.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain DUF2250 PF10007.4 gi|407465345|ref|YP_006776227.1| - 0.016 15.1 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF1268 PF06896.6 gi|407465345|ref|YP_006776227.1| - 0.022 15.0 0.1 0.029 14.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1268) TFIIE_alpha PF02002.12 gi|407465345|ref|YP_006776227.1| - 0.025 14.0 0.0 0.033 13.6 0.0 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_45 PF14947.1 gi|407465345|ref|YP_006776227.1| - 0.057 13.2 0.0 0.094 12.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix HxlR PF01638.12 gi|407465345|ref|YP_006776227.1| - 0.12 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Band_7 PF01145.20 gi|407465346|ref|YP_006776228.1| - 3.8e-25 88.8 6.4 5.7e-25 88.2 4.5 1.3 1 1 0 1 1 1 1 SPFH domain / Band 7 family Thioredoxin_3 PF13192.1 gi|407465347|ref|YP_006776229.1| - 0.058 13.2 0.0 0.082 12.7 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin domain DUF4296 PF14129.1 gi|407465347|ref|YP_006776229.1| - 0.23 11.6 4.1 0.38 10.9 2.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4296) 60KD_IMP PF02096.15 gi|407465347|ref|YP_006776229.1| - 0.79 9.3 3.3 0.59 9.7 1.5 1.5 1 1 0 1 1 1 0 60Kd inner membrane protein Cupredoxin_1 PF13473.1 gi|407465348|ref|YP_006776230.1| - 9e-05 22.3 0.0 0.00015 21.6 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain Methyltransf_23 PF13489.1 gi|407465349|ref|YP_006776231.1| - 1.6e-07 31.1 0.0 2.5e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|407465349|ref|YP_006776231.1| - 5e-06 26.9 0.0 9.7e-06 25.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Trm112p PF03966.11 gi|407465349|ref|YP_006776231.1| - 2.8e-05 24.4 1.1 0.00096 19.4 0.7 2.7 2 1 0 2 2 2 1 Trm112p-like protein Methyltransf_31 PF13847.1 gi|407465349|ref|YP_006776231.1| - 0.00057 19.5 0.0 0.00093 18.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407465349|ref|YP_006776231.1| - 0.0028 18.1 0.0 0.0058 17.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|407465349|ref|YP_006776231.1| - 0.003 16.9 0.0 0.0065 15.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.2 gi|407465349|ref|YP_006776231.1| - 0.0042 17.6 0.0 0.0076 16.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|407465349|ref|YP_006776231.1| - 0.012 15.9 0.0 0.038 14.3 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Elf1 PF05129.8 gi|407465349|ref|YP_006776231.1| - 0.013 15.1 0.1 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zf-CSL PF05207.8 gi|407465349|ref|YP_006776231.1| - 0.015 14.7 0.8 0.034 13.6 0.5 1.6 1 0 0 1 1 1 0 CSL zinc finger YopR_core PF09025.5 gi|407465349|ref|YP_006776231.1| - 0.026 14.5 0.1 0.66 9.9 0.0 2.4 3 0 0 3 3 3 0 YopR Core NodS PF05401.6 gi|407465349|ref|YP_006776231.1| - 0.027 13.8 0.0 0.039 13.3 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_26 PF13659.1 gi|407465349|ref|YP_006776231.1| - 0.09 12.8 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Zn_Tnp_IS1595 PF12760.2 gi|407465349|ref|YP_006776231.1| - 0.11 12.2 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Transglut_core2 PF13369.1 gi|407465350|ref|YP_006776232.1| - 2.8e-40 137.2 0.0 3.9e-40 136.8 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily TPR_9 PF13371.1 gi|407465350|ref|YP_006776232.1| - 2.1e-16 59.5 0.0 3.2e-16 58.9 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.23 gi|407465350|ref|YP_006776232.1| - 0.00012 21.4 0.6 0.025 14.1 0.2 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|407465350|ref|YP_006776232.1| - 0.00021 21.0 0.3 0.086 12.7 0.0 2.7 1 1 1 2 2 2 2 Fis1 C-terminal tetratricopeptide repeat TPR_2 PF07719.12 gi|407465350|ref|YP_006776232.1| - 0.00054 19.6 0.1 0.041 13.8 0.1 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407465350|ref|YP_006776232.1| - 0.0028 17.3 0.4 0.017 14.8 0.1 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407465350|ref|YP_006776232.1| - 0.0041 17.0 0.0 0.007 16.2 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.1 gi|407465350|ref|YP_006776232.1| - 0.026 14.1 0.2 0.3 10.7 0.1 2.1 1 1 1 2 2 2 0 TPR repeat TPR_14 PF13428.1 gi|407465350|ref|YP_006776232.1| - 0.028 15.0 0.0 0.41 11.4 0.0 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat DivIC PF04977.10 gi|407465351|ref|YP_006776233.1| - 0.0071 15.8 0.8 0.013 14.9 0.6 1.4 1 1 0 1 1 1 1 Septum formation initiator TSC22 PF01166.13 gi|407465351|ref|YP_006776233.1| - 0.084 12.8 0.4 0.13 12.2 0.3 1.4 1 1 0 1 1 1 0 TSC-22/dip/bun family DUF1192 PF06698.6 gi|407465351|ref|YP_006776233.1| - 0.1 12.3 2.2 0.27 11.0 1.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) OrfB_Zn_ribbon PF07282.6 gi|407465352|ref|YP_006776234.1| - 0.0077 15.8 0.3 0.0083 15.7 0.2 1.1 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Elf1 PF05129.8 gi|407465352|ref|YP_006776234.1| - 0.014 15.1 1.0 0.017 14.7 0.7 1.1 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zf-RING_4 PF14570.1 gi|407465352|ref|YP_006776234.1| - 0.018 14.6 1.5 3.5 7.2 0.1 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zinc_ribbon_4 PF13717.1 gi|407465352|ref|YP_006776234.1| - 0.025 14.2 0.6 0.47 10.1 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbon domain IBR PF01485.16 gi|407465352|ref|YP_006776234.1| - 0.035 13.9 1.1 0.055 13.3 0.8 1.3 1 1 0 1 1 1 0 IBR domain PhnA_Zn_Ribbon PF08274.7 gi|407465352|ref|YP_006776234.1| - 0.047 13.4 2.1 1.3 8.8 0.2 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_5 PF13719.1 gi|407465352|ref|YP_006776234.1| - 0.063 12.8 2.4 0.63 9.6 1.7 2.1 1 1 0 1 1 1 0 zinc-ribbon domain DUF2387 PF09526.5 gi|407465352|ref|YP_006776234.1| - 0.075 12.9 0.2 0.098 12.5 0.1 1.2 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) zf-H2C2_2 PF13465.1 gi|407465352|ref|YP_006776234.1| - 0.16 12.2 1.0 4.8 7.6 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger double domain DUF4451 PF14616.1 gi|407465352|ref|YP_006776234.1| - 0.27 10.9 2.3 0.72 9.6 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4451) Zn-ribbon_8 PF09723.5 gi|407465352|ref|YP_006776234.1| - 0.34 10.8 1.9 3.6 7.6 0.4 2.1 2 0 0 2 2 2 0 Zinc ribbon domain zf-BED PF02892.10 gi|407465352|ref|YP_006776234.1| - 0.53 10.0 2.2 0.61 9.8 0.5 1.9 1 1 0 2 2 2 0 BED zinc finger Prok-RING_1 PF14446.1 gi|407465352|ref|YP_006776234.1| - 0.6 9.8 2.7 3.2 7.5 0.2 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4_3 PF13920.1 gi|407465352|ref|YP_006776234.1| - 1.6 8.4 4.5 14 5.4 0.2 2.1 1 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Metallophos_2 PF12850.2 gi|407465353|ref|YP_006776235.1| - 3.9e-20 72.2 0.1 5.2e-20 71.8 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|407465353|ref|YP_006776235.1| - 8.2e-18 64.5 0.2 1.1e-17 64.1 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|407465353|ref|YP_006776235.1| - 0.00024 20.3 0.0 0.0016 17.6 0.0 2.0 2 0 0 2 2 2 1 Metallophosphoesterase, calcineurin superfamily DUF2124 PF09897.4 gi|407465353|ref|YP_006776235.1| - 0.00036 20.2 0.0 0.00067 19.3 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) Iso_dh PF00180.15 gi|407465354|ref|YP_006776236.1| - 4.2e-79 266.0 0.4 5e-79 265.7 0.2 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase MTS PF05175.9 gi|407465355|ref|YP_006776237.1| - 2.2e-09 36.9 0.0 3e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.1 gi|407465355|ref|YP_006776237.1| - 3.9e-09 36.2 0.3 5.5e-09 35.7 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407465355|ref|YP_006776237.1| - 7.8e-07 28.9 0.0 4.4e-06 26.5 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|407465355|ref|YP_006776237.1| - 5.2e-05 23.6 0.1 9.7e-05 22.7 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|407465355|ref|YP_006776237.1| - 8.3e-05 22.6 0.0 0.00014 21.8 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 gi|407465355|ref|YP_006776237.1| - 0.0011 17.9 0.0 0.0016 17.3 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_18 PF12847.2 gi|407465355|ref|YP_006776237.1| - 0.0011 19.5 0.0 0.0019 18.7 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|407465355|ref|YP_006776237.1| - 0.0022 17.5 0.0 0.016 14.7 0.0 1.9 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.7 gi|407465355|ref|YP_006776237.1| - 0.0022 18.4 0.2 0.0036 17.7 0.2 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.1 gi|407465355|ref|YP_006776237.1| - 0.0037 16.9 0.0 0.0062 16.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|407465355|ref|YP_006776237.1| - 0.006 15.6 0.0 0.0087 15.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.1 gi|407465355|ref|YP_006776237.1| - 0.029 14.7 0.1 0.098 13.0 0.1 1.9 1 1 0 1 1 1 0 Methyltransferase domain FtsJ PF01728.14 gi|407465355|ref|YP_006776237.1| - 0.089 12.7 0.0 0.11 12.5 0.0 1.4 1 1 0 1 1 1 0 FtsJ-like methyltransferase RrnaAD PF00398.15 gi|407465356|ref|YP_006776238.1| - 5.1e-41 140.4 1.0 6e-41 140.2 0.7 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.1 gi|407465356|ref|YP_006776238.1| - 1.4e-07 31.2 1.8 1.9e-06 27.5 1.2 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|407465356|ref|YP_006776238.1| - 4e-06 27.3 0.0 8.3e-06 26.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|407465356|ref|YP_006776238.1| - 5.4e-06 26.1 0.3 1.4e-05 24.7 0.0 1.8 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_26 PF13659.1 gi|407465356|ref|YP_006776238.1| - 1.7e-05 24.8 0.0 2.3e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407465356|ref|YP_006776238.1| - 0.00049 19.8 0.0 0.00079 19.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|407465356|ref|YP_006776238.1| - 0.0005 19.4 0.0 0.00079 18.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.7 gi|407465356|ref|YP_006776238.1| - 0.0018 18.7 0.0 0.0029 18.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407465356|ref|YP_006776238.1| - 0.0033 17.8 0.0 0.0095 16.3 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|407465356|ref|YP_006776238.1| - 0.0047 16.0 0.0 0.0083 15.2 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.1 gi|407465356|ref|YP_006776238.1| - 0.011 15.4 0.0 0.025 14.2 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain FUR PF01475.14 gi|407465356|ref|YP_006776238.1| - 0.049 13.5 0.1 0.77 9.6 0.0 2.4 2 0 0 2 2 2 0 Ferric uptake regulator family Tfb4 PF03850.9 gi|407465356|ref|YP_006776238.1| - 0.078 12.2 0.3 0.11 11.7 0.2 1.2 1 0 0 1 1 1 0 Transcription factor Tfb4 DUF655 PF04919.7 gi|407465357|ref|YP_006776239.1| - 4.6e-50 169.8 0.4 5.2e-50 169.6 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.1 gi|407465357|ref|YP_006776239.1| - 6.6e-05 22.8 0.0 0.00025 21.0 0.0 2.0 1 1 1 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.2 gi|407465357|ref|YP_006776239.1| - 0.0022 17.8 0.0 0.013 15.3 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif RE_NgoFVII PF09565.5 gi|407465357|ref|YP_006776239.1| - 0.014 14.3 0.0 0.019 13.9 0.0 1.1 1 0 0 1 1 1 0 NgoFVII restriction endonuclease RNA_pol_Rpb4 PF03874.11 gi|407465358|ref|YP_006776240.1| - 1.8e-13 50.4 2.2 4.3e-13 49.3 1.5 1.5 1 1 0 1 1 1 1 RNA polymerase Rpb4 Ribosomal_L21e PF01157.13 gi|407465359|ref|YP_006776241.1| - 3.9e-14 52.2 1.7 5.1e-14 51.8 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L21e Radical_SAM PF04055.16 gi|407465360|ref|YP_006776242.1| - 6.5e-14 52.4 0.1 2.2e-13 50.7 0.0 1.9 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|407465360|ref|YP_006776242.1| - 0.00017 21.6 0.0 0.00036 20.5 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|407465360|ref|YP_006776242.1| - 0.028 14.5 0.0 0.052 13.6 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF3343 PF11823.3 gi|407465360|ref|YP_006776242.1| - 0.13 11.5 0.1 15 4.9 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3343) Rad51 PF08423.6 gi|407465361|ref|YP_006776243.1| - 2e-93 312.0 0.1 2.9e-93 311.4 0.1 1.2 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.1 gi|407465361|ref|YP_006776243.1| - 4.2e-11 42.6 0.0 8.4e-11 41.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain KaiC PF06745.8 gi|407465361|ref|YP_006776243.1| - 5.3e-09 35.5 0.0 9.5e-09 34.7 0.0 1.4 1 0 0 1 1 1 1 KaiC HHH_5 PF14520.1 gi|407465361|ref|YP_006776243.1| - 8.3e-09 35.4 0.5 2.5e-08 33.9 0.1 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain RecA PF00154.16 gi|407465361|ref|YP_006776243.1| - 1.5e-08 34.0 0.1 2.4e-08 33.4 0.1 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein ABC_tran PF00005.22 gi|407465361|ref|YP_006776243.1| - 0.0055 17.0 0.3 0.025 14.8 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_31 PF13614.1 gi|407465361|ref|YP_006776243.1| - 0.022 14.6 0.0 0.053 13.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain Arch_ATPase PF01637.13 gi|407465361|ref|YP_006776243.1| - 0.06 13.0 0.4 1.1 8.9 0.0 2.7 2 1 1 3 3 3 0 Archaeal ATPase NACHT PF05729.7 gi|407465361|ref|YP_006776243.1| - 0.091 12.4 0.1 0.33 10.6 0.0 1.9 3 0 0 3 3 3 0 NACHT domain Ribosomal_S30 PF04758.9 gi|407465362|ref|YP_006776244.1| - 2.8e-08 33.3 4.8 8e-08 31.9 3.3 1.9 1 1 0 1 1 1 1 Ribosomal protein S30 Radical_SAM PF04055.16 gi|407465363|ref|YP_006776245.1| - 1.1e-08 35.4 0.0 2.3e-08 34.3 0.0 1.6 1 1 0 1 1 1 1 Radical SAM superfamily NAD_binding_1 PF00175.16 gi|407465364|ref|YP_006776246.1| - 9.9e-17 61.4 0.0 1.9e-16 60.5 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.4 gi|407465364|ref|YP_006776246.1| - 2.1e-11 43.1 8.3 4e-11 42.2 5.8 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.19 gi|407465364|ref|YP_006776246.1| - 7.8e-06 25.9 0.0 1.5e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.7 gi|407465364|ref|YP_006776246.1| - 0.19 11.5 0.7 15 5.4 0.0 2.5 2 1 1 3 3 3 0 Ferric reductase NAD binding domain DHO_dh PF01180.16 gi|407465365|ref|YP_006776247.1| - 3.2e-57 193.7 1.4 3.6e-57 193.5 1.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.12 gi|407465365|ref|YP_006776247.1| - 2.3e-08 33.2 0.1 1.9e-05 23.6 0.0 2.0 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.16 gi|407465365|ref|YP_006776247.1| - 1e-06 28.1 0.2 0.0015 17.8 0.0 2.5 3 0 0 3 3 3 2 Histidine biosynthesis protein NMO PF03060.10 gi|407465365|ref|YP_006776247.1| - 4.9e-06 25.9 0.5 0.00068 18.8 0.0 2.2 1 1 1 2 2 2 2 Nitronate monooxygenase DUF561 PF04481.7 gi|407465365|ref|YP_006776247.1| - 0.00018 20.5 11.6 0.0011 17.9 0.0 3.5 3 1 0 4 4 4 2 Protein of unknown function (DUF561) ThiG PF05690.9 gi|407465365|ref|YP_006776247.1| - 0.00034 19.7 4.1 0.099 11.7 0.7 2.7 2 1 1 3 3 3 2 Thiazole biosynthesis protein ThiG IMPDH PF00478.20 gi|407465365|ref|YP_006776247.1| - 0.0019 17.1 0.5 0.0038 16.1 0.0 1.6 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain G3P_antiterm PF04309.7 gi|407465365|ref|YP_006776247.1| - 0.0047 15.9 0.4 2.7 6.9 0.2 2.3 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator Nop PF01798.13 gi|407465366|ref|YP_006776248.1| - 7.6e-50 168.1 0.9 1.4e-49 167.2 0.6 1.4 1 0 0 1 1 1 1 Putative snoRNA binding domain NOSIC PF08060.8 gi|407465366|ref|YP_006776248.1| - 4.8e-20 71.1 0.0 9.6e-20 70.1 0.0 1.5 1 0 0 1 1 1 1 NOSIC (NUC001) domain DUF148 PF02520.12 gi|407465366|ref|YP_006776248.1| - 0.068 12.9 0.0 0.18 11.5 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function DUF148 AAA_15 PF13175.1 gi|407465368|ref|YP_006776250.1| - 1.2e-20 74.0 13.3 1.2e-20 74.0 9.2 3.5 2 2 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.1 gi|407465368|ref|YP_006776250.1| - 2.9e-12 47.1 26.0 3.1e-11 43.7 11.8 3.9 2 2 0 2 2 2 1 AAA domain DUF2813 PF11398.3 gi|407465368|ref|YP_006776250.1| - 0.00064 18.9 0.0 0.4 9.7 0.0 2.8 3 0 0 3 3 3 2 Protein of unknown function (DUF2813) ABC_tran PF00005.22 gi|407465368|ref|YP_006776250.1| - 0.002 18.4 3.8 0.0024 18.1 0.7 2.6 2 1 0 2 2 2 1 ABC transporter AAA_29 PF13555.1 gi|407465368|ref|YP_006776250.1| - 0.0059 16.1 0.6 0.017 14.6 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.18 gi|407465368|ref|YP_006776250.1| - 0.074 13.0 0.0 0.23 11.4 0.0 1.9 1 0 0 1 1 1 0 50S ribosome-binding GTPase SMC_N PF02463.14 gi|407465368|ref|YP_006776250.1| - 0.14 11.4 0.7 1.4 8.1 0.5 2.3 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain HD_3 PF13023.1 gi|407465368|ref|YP_006776250.1| - 0.32 10.7 2.5 1 9.1 0.0 2.8 3 0 0 3 3 3 0 HD domain AAA_23 PF13476.1 gi|407465368|ref|YP_006776250.1| - 0.87 9.8 28.8 0.043 14.1 12.4 2.9 2 1 0 2 2 2 0 AAA domain A2M_N PF01835.14 gi|407465369|ref|YP_006776251.1| - 1.2e-27 96.0 1.3 3.4e-06 27.2 0.0 6.9 7 0 0 7 7 7 5 MG2 domain FlgD_ig PF13860.1 gi|407465369|ref|YP_006776251.1| - 9.4e-08 31.6 12.3 0.0022 17.7 0.0 6.6 7 0 0 7 7 7 3 FlgD Ig-like domain Cna_B PF05738.8 gi|407465369|ref|YP_006776251.1| - 3.4e-06 26.7 7.0 1.2 8.9 0.1 5.8 5 0 0 5 5 5 3 Cna protein B-type domain A2M_N_2 PF07703.9 gi|407465369|ref|YP_006776251.1| - 0.00058 19.6 0.0 0.25 11.1 0.0 4.0 5 1 0 5 5 5 1 Alpha-2-macroglobulin family N-terminal region Pribosyltran PF00156.22 gi|407465370|ref|YP_006776252.1| - 6.6e-19 67.8 0.1 8.5e-19 67.5 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|407465370|ref|YP_006776252.1| - 0.017 14.3 0.0 0.021 14.0 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase PNP_UDP_1 PF01048.15 gi|407465371|ref|YP_006776253.1| - 1e-44 152.2 0.0 1.1e-44 152.1 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily zf-met PF12874.2 gi|407465373|ref|YP_006776255.1| - 0.048 13.8 0.5 0.11 12.7 0.4 1.6 1 0 0 1 1 1 0 Zinc-finger of C2H2 type TrmB PF01978.14 gi|407465374|ref|YP_006776256.1| - 0.00078 19.1 0.0 0.0011 18.6 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Sigma70_r4_2 PF08281.7 gi|407465374|ref|YP_006776256.1| - 0.019 14.4 0.1 0.031 13.7 0.1 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 CreD PF06123.7 gi|407465375|ref|YP_006776257.1| - 0.054 12.0 2.0 0.056 11.9 1.4 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD RDD PF06271.7 gi|407465375|ref|YP_006776257.1| - 1.5 8.6 7.3 1.8 8.4 0.9 2.0 1 1 1 2 2 2 0 RDD family zf-IS66 PF13005.2 gi|407465376|ref|YP_006776258.1| - 0.088 12.7 7.8 0.52 10.3 0.5 2.3 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 P2X_receptor PF00864.14 gi|407465376|ref|YP_006776258.1| - 1.6 7.3 4.8 1.5 7.4 3.3 1.0 1 0 0 1 1 1 0 ATP P2X receptor P-II PF00543.17 gi|407465377|ref|YP_006776259.1| - 6.1e-21 74.8 2.1 7.1e-21 74.5 1.5 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF970 PF06153.6 gi|407465377|ref|YP_006776259.1| - 0.016 15.1 0.1 0.14 12.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF970) Smr PF01713.16 gi|407465377|ref|YP_006776259.1| - 0.022 14.9 0.1 0.034 14.3 0.1 1.3 1 1 0 1 1 1 0 Smr domain Usp PF00582.21 gi|407465378|ref|YP_006776260.1| - 1.7e-32 112.5 0.0 2e-32 112.2 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Virul_fac_BrkB PF03631.10 gi|407465379|ref|YP_006776261.1| - 0.0079 15.5 0.2 0.0099 15.2 0.1 1.1 1 0 0 1 1 1 1 Virulence factor BrkB Claudin_2 PF13903.1 gi|407465379|ref|YP_006776261.1| - 0.018 14.7 0.1 0.021 14.4 0.1 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF1129 PF06570.6 gi|407465379|ref|YP_006776261.1| - 0.11 11.7 0.7 0.13 11.5 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) zf-FCS PF06467.9 gi|407465379|ref|YP_006776261.1| - 3.2 7.4 9.0 14 5.4 6.3 1.9 1 1 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif Gram_pos_anchor PF00746.16 gi|407465379|ref|YP_006776261.1| - 8.8 6.2 6.0 38 4.2 3.4 2.3 2 0 0 2 2 2 0 Gram positive anchor SSF PF00474.12 gi|407465380|ref|YP_006776262.1| - 2.7e-25 88.8 42.8 2.7e-25 88.8 29.6 1.8 2 0 0 2 2 2 1 Sodium:solute symporter family TM231 PF10149.4 gi|407465380|ref|YP_006776262.1| - 1.1 8.2 2.9 0.9 8.4 0.8 1.7 2 0 0 2 2 2 0 Transmembrane protein 231 Amidohydro_1 PF01979.15 gi|407465381|ref|YP_006776263.1| - 5.4e-63 213.6 3.1 6.6e-63 213.3 2.1 1.1 1 0 0 1 1 1 1 Amidohydrolase family Urease_alpha PF00449.15 gi|407465381|ref|YP_006776263.1| - 4.8e-50 168.7 4.1 9.9e-50 167.7 2.9 1.5 1 0 0 1 1 1 1 Urease alpha-subunit, N-terminal domain Amidohydro_5 PF13594.1 gi|407465381|ref|YP_006776263.1| - 8.9e-06 25.4 5.6 8.9e-06 25.4 3.9 2.7 2 1 1 3 3 3 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|407465381|ref|YP_006776263.1| - 2e-05 24.0 4.3 0.0034 16.6 0.5 2.6 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_4 PF13147.1 gi|407465381|ref|YP_006776263.1| - 0.0028 17.7 0.5 0.031 14.3 0.3 2.2 1 1 0 1 1 1 1 Amidohydrolase Urease_beta PF00699.15 gi|407465382|ref|YP_006776264.1| - 7.4e-42 141.2 0.0 8.6e-42 141.0 0.0 1.1 1 0 0 1 1 1 1 Urease beta subunit Urease_gamma PF00547.13 gi|407465383|ref|YP_006776265.1| - 2e-44 149.6 0.0 2.2e-44 149.5 0.0 1.0 1 0 0 1 1 1 1 Urease, gamma subunit UreE_N PF02814.10 gi|407465384|ref|YP_006776266.1| - 5.2e-10 38.6 0.1 1.2e-09 37.5 0.1 1.6 1 0 0 1 1 1 1 UreE urease accessory protein, N-terminal domain UreE_C PF05194.7 gi|407465384|ref|YP_006776266.1| - 6.9e-07 29.2 0.1 9.5e-07 28.8 0.1 1.2 1 0 0 1 1 1 1 UreE urease accessory protein, C-terminal domain UreF PF01730.11 gi|407465385|ref|YP_006776267.1| - 2.4e-24 86.1 0.0 2.9e-24 85.8 0.0 1.1 1 0 0 1 1 1 1 UreF DUF1507 PF07408.6 gi|407465385|ref|YP_006776267.1| - 0.064 13.0 0.0 0.25 11.0 0.0 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1507) cobW PF02492.14 gi|407465386|ref|YP_006776268.1| - 3.3e-35 121.1 0.0 4e-35 120.8 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|407465386|ref|YP_006776268.1| - 4.3e-09 35.5 1.0 2e-08 33.3 0.7 1.8 1 1 0 1 1 1 1 ArgK protein MobB PF03205.9 gi|407465386|ref|YP_006776268.1| - 7.7e-07 28.8 0.0 1.5e-06 27.9 0.0 1.5 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.1 gi|407465386|ref|YP_006776268.1| - 0.0027 17.9 0.0 0.0045 17.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|407465386|ref|YP_006776268.1| - 0.0088 15.5 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain NTPase_1 PF03266.10 gi|407465386|ref|YP_006776268.1| - 0.011 15.4 0.0 0.02 14.5 0.0 1.6 1 0 0 1 1 1 0 NTPase AAA_17 PF13207.1 gi|407465386|ref|YP_006776268.1| - 0.013 16.3 0.1 0.02 15.7 0.1 1.7 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|407465386|ref|YP_006776268.1| - 0.013 14.6 0.0 0.023 13.8 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI GTP_EFTU PF00009.22 gi|407465386|ref|YP_006776268.1| - 0.017 14.5 0.8 1.6 8.0 0.0 2.7 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_33 PF13671.1 gi|407465386|ref|YP_006776268.1| - 0.036 13.9 0.0 0.057 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.5 gi|407465386|ref|YP_006776268.1| - 0.038 13.1 0.0 0.057 12.6 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 ATP_bind_1 PF03029.12 gi|407465386|ref|YP_006776268.1| - 0.041 13.4 0.0 0.14 11.6 0.0 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein MMR_HSR1 PF01926.18 gi|407465386|ref|YP_006776268.1| - 0.053 13.4 0.2 0.19 11.6 0.1 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase ABC_tran PF00005.22 gi|407465386|ref|YP_006776268.1| - 0.088 13.1 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_22 PF13401.1 gi|407465386|ref|YP_006776268.1| - 0.11 12.6 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|407465386|ref|YP_006776268.1| - 0.12 12.3 0.0 0.25 11.3 0.0 1.5 2 0 0 2 2 1 0 AAA ATPase domain Zeta_toxin PF06414.7 gi|407465386|ref|YP_006776268.1| - 0.15 11.1 0.0 0.29 10.1 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin UreD PF01774.12 gi|407465387|ref|YP_006776269.1| - 3e-49 167.3 0.0 3.6e-49 167.0 0.0 1.1 1 0 0 1 1 1 1 UreD urease accessory protein NicO PF03824.11 gi|407465388|ref|YP_006776270.1| - 6.4e-13 48.6 16.3 1.4e-12 47.5 11.3 1.6 1 1 0 1 1 1 1 High-affinity nickel-transport protein DsbD_2 PF13386.1 gi|407465388|ref|YP_006776270.1| - 1.6e-08 34.5 5.2 9.8e-08 31.9 0.9 2.1 1 1 1 2 2 2 2 Cytochrome C biogenesis protein transmembrane region 7tm_7 PF08395.7 gi|407465388|ref|YP_006776270.1| - 0.0012 17.9 0.0 0.0016 17.5 0.0 1.1 1 0 0 1 1 1 1 7tm Chemosensory receptor YtpI PF14007.1 gi|407465388|ref|YP_006776270.1| - 0.0044 16.9 1.2 0.0044 16.9 0.8 2.4 3 0 0 3 3 3 1 YtpI-like protein DUF1469 PF07332.6 gi|407465388|ref|YP_006776270.1| - 0.4 10.4 7.2 0.72 9.5 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1469) FUSC-like PF12805.2 gi|407465390|ref|YP_006776272.1| - 0.12 11.2 0.3 0.13 11.1 0.2 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS SSF PF00474.12 gi|407465391|ref|YP_006776273.1| - 2.7e-27 95.4 39.7 3.6e-27 95.0 27.5 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family Usp PF00582.21 gi|407465391|ref|YP_006776273.1| - 3.1e-17 63.0 0.0 6.5e-17 62.0 0.0 1.5 1 0 0 1 1 1 1 Universal stress protein family HTH_24 PF13412.1 gi|407465392|ref|YP_006776274.1| - 0.0067 15.7 2.1 0.34 10.3 0.1 2.3 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|407465392|ref|YP_006776274.1| - 0.12 11.9 0.1 2.2 7.9 0.0 2.1 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DUF501 PF04417.7 gi|407465392|ref|YP_006776274.1| - 0.12 12.1 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF501) DUF3650 PF12368.3 gi|407465392|ref|YP_006776274.1| - 0.13 11.7 0.1 0.37 10.3 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3650) ParBc PF02195.13 gi|407465393|ref|YP_006776275.1| - 1.2e-18 67.0 0.1 3.5e-18 65.5 0.0 1.8 2 0 0 2 2 2 1 ParB-like nuclease domain KorB PF08535.5 gi|407465393|ref|YP_006776275.1| - 0.00013 22.0 0.2 0.00044 20.3 0.1 1.9 1 1 0 1 1 1 1 KorB domain DUF771 PF05595.6 gi|407465393|ref|YP_006776275.1| - 0.026 14.4 0.3 1.2 9.0 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF771) Cu-oxidase_3 PF07732.10 gi|407465396|ref|YP_006776278.1| - 9.7e-26 89.8 6.0 9.5e-24 83.4 0.4 3.3 3 0 0 3 3 3 2 Multicopper oxidase Cu-oxidase_2 PF07731.9 gi|407465396|ref|YP_006776278.1| - 2.6e-14 52.8 8.3 2.2e-05 23.9 1.1 3.5 3 0 0 3 3 3 3 Multicopper oxidase Cupredoxin_1 PF13473.1 gi|407465396|ref|YP_006776278.1| - 5.4e-11 42.3 0.1 1.7e-05 24.6 0.0 3.5 3 0 0 3 3 3 2 Cupredoxin-like domain Copper-bind PF00127.15 gi|407465396|ref|YP_006776278.1| - 7.2e-08 32.5 7.5 0.0001 22.4 0.1 4.0 3 2 0 3 3 3 2 Copper binding proteins, plastocyanin/azurin family COX2 PF00116.15 gi|407465396|ref|YP_006776278.1| - 0.27 11.0 3.3 0.71 9.7 0.6 2.8 3 0 0 3 3 3 0 Cytochrome C oxidase subunit II, periplasmic domain DUF3169 PF11368.3 gi|407465397|ref|YP_006776279.1| - 0.0035 16.5 2.7 0.0037 16.5 1.3 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3169) GvpH PF05455.6 gi|407465397|ref|YP_006776279.1| - 0.027 14.1 0.0 0.043 13.4 0.0 1.4 1 1 1 2 2 2 0 GvpH DUF4131 PF13567.1 gi|407465397|ref|YP_006776279.1| - 0.042 13.2 0.0 0.052 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3487 PF11990.3 gi|407465397|ref|YP_006776279.1| - 0.05 13.0 0.0 0.065 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) RseC_MucC PF04246.7 gi|407465397|ref|YP_006776279.1| - 0.054 13.0 0.2 0.075 12.5 0.1 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF1129 PF06570.6 gi|407465397|ref|YP_006776279.1| - 0.058 12.7 0.4 0.079 12.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF788 PF05620.6 gi|407465397|ref|YP_006776279.1| - 0.11 12.3 0.2 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF788) EpsG PF14897.1 gi|407465397|ref|YP_006776279.1| - 0.12 11.3 3.0 0.14 11.0 2.1 1.1 1 0 0 1 1 1 0 EpsG family TP6A_N PF04406.9 gi|407465398|ref|YP_006776280.1| - 8.4e-19 67.0 0.1 1.5e-18 66.1 0.1 1.4 1 0 0 1 1 1 1 Type IIB DNA topoisomerase Toprim PF01751.17 gi|407465398|ref|YP_006776280.1| - 0.076 12.9 0.5 0.16 11.9 0.0 1.9 2 0 0 2 2 2 0 Toprim domain Topo-VIb_trans PF09239.6 gi|407465399|ref|YP_006776281.1| - 8e-60 201.0 0.0 1.4e-59 200.1 0.0 1.4 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.21 gi|407465399|ref|YP_006776281.1| - 2.5e-09 36.8 0.0 5.3e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 gi|407465399|ref|YP_006776281.1| - 2.8e-08 33.5 0.0 5.6e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KH_1 PF00013.24 gi|407465400|ref|YP_006776282.1| - 5.8e-15 54.6 8.2 2.5e-07 30.2 0.6 2.4 2 0 0 2 2 2 2 KH domain KH_3 PF13014.1 gi|407465400|ref|YP_006776282.1| - 1e-05 25.0 8.1 0.016 14.8 1.4 3.0 2 1 1 3 3 3 2 KH domain KH_2 PF07650.12 gi|407465400|ref|YP_006776282.1| - 0.14 11.6 4.7 1.1 8.8 0.4 2.6 2 0 0 2 2 2 0 KH domain RIO1 PF01163.17 gi|407465401|ref|YP_006776283.1| - 1.6e-53 180.8 0.0 2.2e-53 180.4 0.0 1.1 1 0 0 1 1 1 1 RIO1 family APH PF01636.18 gi|407465401|ref|YP_006776283.1| - 0.0015 18.3 0.0 0.13 11.9 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.9 gi|407465401|ref|YP_006776283.1| - 0.0082 15.2 0.0 0.18 10.8 0.0 2.1 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Trigger_N PF05697.8 gi|407465401|ref|YP_006776283.1| - 0.084 12.6 0.1 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial trigger factor protein (TF) DUF424 PF04242.8 gi|407465402|ref|YP_006776284.1| - 3.9e-21 74.8 0.3 4.7e-21 74.6 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) eIF-5_eIF-2B PF01873.12 gi|407465403|ref|YP_006776285.1| - 9.4e-27 93.1 0.0 1.1e-26 92.8 0.0 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TF_Zn_Ribbon PF08271.7 gi|407465403|ref|YP_006776285.1| - 0.0078 15.5 1.8 0.0083 15.4 0.4 1.7 2 0 0 2 2 2 1 TFIIB zinc-binding DUF2387 PF09526.5 gi|407465403|ref|YP_006776285.1| - 0.021 14.7 0.1 0.044 13.7 0.1 1.5 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) Elf1 PF05129.8 gi|407465403|ref|YP_006776285.1| - 0.029 14.0 0.3 0.05 13.3 0.2 1.3 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.1 gi|407465403|ref|YP_006776285.1| - 0.052 13.8 0.3 0.083 13.2 0.2 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.5 gi|407465403|ref|YP_006776285.1| - 0.2 11.6 1.8 3.3 7.7 0.1 2.2 1 1 1 2 2 2 0 Zinc ribbon domain HypA PF01155.14 gi|407465404|ref|YP_006776286.1| - 0.02 14.5 0.5 0.02 14.5 0.3 1.0 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family DZR PF12773.2 gi|407465404|ref|YP_006776286.1| - 0.029 14.1 2.7 0.05 13.4 1.9 1.4 1 1 0 1 1 1 0 Double zinc ribbon GFA PF04828.9 gi|407465404|ref|YP_006776286.1| - 0.065 13.1 2.7 0.3 11.0 1.8 1.8 1 1 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme Antiterm PF03589.8 gi|407465404|ref|YP_006776286.1| - 0.094 12.8 0.5 0.1 12.7 0.4 1.2 1 0 0 1 1 1 0 Antitermination protein Auto_anti-p27 PF06677.7 gi|407465404|ref|YP_006776286.1| - 0.1 12.3 2.0 0.37 10.5 0.1 2.1 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-ribbon_3 PF13248.1 gi|407465404|ref|YP_006776286.1| - 0.11 11.7 2.0 0.55 9.5 0.4 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|407465404|ref|YP_006776286.1| - 0.11 11.9 1.2 1.5 8.4 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-ISL3 PF14690.1 gi|407465404|ref|YP_006776286.1| - 0.14 12.2 2.6 3.6 7.6 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF2072 PF09845.4 gi|407465404|ref|YP_006776286.1| - 0.19 11.6 0.9 0.25 11.2 0.6 1.4 1 1 0 1 1 1 0 Zn-ribbon containing protein (DUF2072) TF_Zn_Ribbon PF08271.7 gi|407465404|ref|YP_006776286.1| - 0.28 10.5 1.6 11 5.3 0.2 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding zf-C3HC4_3 PF13920.1 gi|407465404|ref|YP_006776286.1| - 0.38 10.4 3.2 1.8 8.3 2.2 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_4 PF13717.1 gi|407465404|ref|YP_006776286.1| - 0.47 10.1 5.7 1.9 8.2 4.0 1.9 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407465404|ref|YP_006776286.1| - 0.64 9.6 6.0 2.9 7.5 4.1 1.9 1 1 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|407465404|ref|YP_006776286.1| - 0.75 9.8 3.1 3.6 7.6 2.1 2.0 1 1 0 1 1 1 0 Zinc ribbon domain THOC7 PF05615.8 gi|407465405|ref|YP_006776287.1| - 0.0022 18.2 3.8 0.0039 17.4 2.7 1.5 1 1 0 1 1 1 1 Tho complex subunit 7 DUF4355 PF14265.1 gi|407465405|ref|YP_006776287.1| - 0.014 15.3 1.7 0.026 14.4 0.7 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4355) TPR_18 PF13512.1 gi|407465405|ref|YP_006776287.1| - 0.022 14.7 0.3 0.085 12.8 0.1 1.9 1 1 1 2 2 2 0 Tetratricopeptide repeat UPF0118 PF01594.11 gi|407465405|ref|YP_006776287.1| - 0.026 13.5 1.1 0.035 13.0 0.5 1.4 1 1 0 1 1 1 0 Domain of unknown function DUF20 DUF2175 PF09943.4 gi|407465405|ref|YP_006776287.1| - 0.44 10.6 2.2 0.56 10.2 0.9 1.6 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) DUF373 PF04123.8 gi|407465406|ref|YP_006776288.1| - 3.5e-108 361.6 9.3 4.1e-108 361.4 6.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) Prenyltransf PF01255.14 gi|407465407|ref|YP_006776289.1| - 1.8e-77 259.4 0.1 2.1e-77 259.2 0.1 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase NUDIX PF00293.23 gi|407465408|ref|YP_006776290.1| - 1.5e-18 66.7 0.1 1.6e-18 66.6 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain OMPdecase PF00215.19 gi|407465409|ref|YP_006776291.1| - 1.1e-26 93.6 0.0 1.3e-26 93.3 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Sialidase PF02973.11 gi|407465409|ref|YP_006776291.1| - 0.048 12.6 0.5 0.21 10.5 0.2 2.2 2 1 0 2 2 2 0 Sialidase, N-terminal domain Adenylsucc_synt PF00709.16 gi|407465411|ref|YP_006776293.1| - 1e-87 294.5 1.6 6.7e-42 143.6 0.0 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase Glyco_transf_54 PF04666.8 gi|407465412|ref|YP_006776294.1| - 0.018 13.7 0.1 0.038 12.7 0.1 1.4 1 1 1 2 2 2 0 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region Annexin PF00191.15 gi|407465412|ref|YP_006776294.1| - 0.039 13.8 0.1 0.097 12.5 0.0 1.7 2 0 0 2 2 2 0 Annexin Iron_traffic PF04362.9 gi|407465413|ref|YP_006776295.1| - 2.1e-08 33.4 1.8 2.6e-08 33.1 1.2 1.3 1 1 0 1 1 1 1 Bacterial Fe(2+) trafficking zinc_ribbon_2 PF13240.1 gi|407465413|ref|YP_006776295.1| - 0.12 11.9 2.4 0.37 10.3 1.7 1.8 1 1 0 1 1 1 0 zinc-ribbon domain RIG-I_C-RD PF11648.3 gi|407465414|ref|YP_006776296.1| - 0.028 14.3 0.5 3.2 7.6 0.1 2.0 1 1 1 2 2 2 0 C-terminal domain of RIG-I zinc-ribbons_6 PF07191.7 gi|407465414|ref|YP_006776296.1| - 0.069 12.9 0.3 0.089 12.5 0.2 1.2 1 0 0 1 1 1 0 zinc-ribbons zf-C4_Topoisom PF01396.14 gi|407465414|ref|YP_006776296.1| - 0.11 12.0 0.8 1.2 8.6 0.1 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Lar_restr_allev PF14354.1 gi|407465414|ref|YP_006776296.1| - 0.14 12.5 2.0 0.55 10.5 1.4 1.9 1 1 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_4 PF13717.1 gi|407465414|ref|YP_006776296.1| - 0.15 11.7 6.8 2.6 7.7 4.7 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_S27e PF01667.12 gi|407465414|ref|YP_006776296.1| - 0.18 11.3 4.4 0.42 10.1 3.1 1.6 1 1 0 1 1 1 0 Ribosomal protein S27 zinc_ribbon_5 PF13719.1 gi|407465414|ref|YP_006776296.1| - 0.19 11.3 7.0 3.1 7.4 4.8 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Zn_Tnp_IS1 PF03811.8 gi|407465414|ref|YP_006776296.1| - 0.2 11.2 2.6 0.91 9.0 0.1 2.4 3 0 0 3 3 3 0 InsA N-terminal domain Mu-like_Com PF10122.4 gi|407465414|ref|YP_006776296.1| - 0.46 9.5 4.2 0.82 8.7 0.5 2.2 1 1 1 2 2 2 0 Mu-like prophage protein Com PIRT PF15099.1 gi|407465415|ref|YP_006776297.1| - 0.024 13.8 0.6 0.024 13.8 0.4 2.6 2 1 1 3 3 3 0 Phosphoinositide-interacting protein family DUF2878 PF11086.3 gi|407465415|ref|YP_006776297.1| - 5.2 7.0 10.2 2.9 7.8 3.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2878) DUF1146 PF06612.6 gi|407465415|ref|YP_006776297.1| - 5.8 6.9 9.6 0.89 9.5 0.4 4.0 4 1 0 4 4 4 0 Protein of unknown function (DUF1146) HTH_45 PF14947.1 gi|407465416|ref|YP_006776298.1| - 4.1e-13 48.9 0.3 5.4e-13 48.5 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.2 gi|407465416|ref|YP_006776298.1| - 4e-07 29.6 0.0 5.1e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 MarR family Mrr_N PF14338.1 gi|407465416|ref|YP_006776298.1| - 7e-05 22.8 0.0 8.2e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Mrr N-terminal domain HTH_27 PF13463.1 gi|407465416|ref|YP_006776298.1| - 0.00021 21.5 0.1 0.00025 21.2 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.17 gi|407465416|ref|YP_006776298.1| - 0.00039 20.0 0.0 0.00051 19.6 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|407465416|ref|YP_006776298.1| - 0.00046 19.8 0.0 0.00062 19.4 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|407465416|ref|YP_006776298.1| - 0.0006 19.1 0.1 0.001 18.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|407465416|ref|YP_006776298.1| - 0.0011 18.9 0.1 0.0018 18.2 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain RPA_C PF08784.6 gi|407465416|ref|YP_006776298.1| - 0.0023 18.2 0.0 0.0038 17.6 0.0 1.3 1 0 0 1 1 1 1 Replication protein A C terminal RQC PF09382.5 gi|407465416|ref|YP_006776298.1| - 0.0038 16.9 0.1 0.0042 16.7 0.0 1.1 1 0 0 1 1 1 1 RQC domain HTH_IclR PF09339.5 gi|407465416|ref|YP_006776298.1| - 0.0041 16.6 0.0 0.0056 16.2 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain FeoC PF09012.5 gi|407465416|ref|YP_006776298.1| - 0.0049 16.5 0.0 0.0059 16.2 0.0 1.1 1 0 0 1 1 1 1 FeoC like transcriptional regulator DUF4364 PF14277.1 gi|407465416|ref|YP_006776298.1| - 0.0057 16.2 0.1 0.0076 15.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) DUF2250 PF10007.4 gi|407465416|ref|YP_006776298.1| - 0.0081 16.0 0.1 0.016 15.0 0.1 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) RNA_pol_Rpc34 PF05158.7 gi|407465416|ref|YP_006776298.1| - 0.016 14.4 0.1 0.016 14.4 0.0 1.0 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit PadR PF03551.9 gi|407465416|ref|YP_006776298.1| - 0.016 14.9 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_20 PF12840.2 gi|407465416|ref|YP_006776298.1| - 0.042 13.6 0.0 0.055 13.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|407465416|ref|YP_006776298.1| - 0.06 13.4 0.0 0.074 13.1 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator Rio2_N PF09202.6 gi|407465416|ref|YP_006776298.1| - 0.088 12.8 0.1 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Rio2, N-terminal HTH_5 PF01022.15 gi|407465416|ref|YP_006776298.1| - 0.094 12.3 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HxlR PF01638.12 gi|407465416|ref|YP_006776298.1| - 0.11 12.2 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Ribosomal_S19e PF01090.14 gi|407465416|ref|YP_006776298.1| - 0.13 11.6 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S19e Sua5_yciO_yrdC PF01300.13 gi|407465417|ref|YP_006776299.1| - 5e-49 165.9 0.0 5.7e-49 165.7 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination THUMP PF02926.12 gi|407465418|ref|YP_006776300.1| - 7.6e-16 58.2 3.4 8.8e-16 58.0 2.3 1.1 1 0 0 1 1 1 1 THUMP domain HSBP1 PF06825.7 gi|407465418|ref|YP_006776300.1| - 0.017 14.6 3.2 0.019 14.5 0.3 2.2 2 0 0 2 2 2 0 Heat shock factor binding protein 1 Het-C PF07217.6 gi|407465418|ref|YP_006776300.1| - 0.05 11.8 0.2 0.061 11.5 0.1 1.0 1 0 0 1 1 1 0 Heterokaryon incompatibility protein Het-C Rad50_zn_hook PF04423.9 gi|407465418|ref|YP_006776300.1| - 6.7 6.2 5.9 14 5.2 0.1 3.4 4 0 0 4 4 4 0 Rad50 zinc hook motif ThiS PF02597.15 gi|407465419|ref|YP_006776301.1| - 7.7e-11 42.2 0.0 4.4e-10 39.8 0.0 2.2 2 0 0 2 2 2 1 ThiS family CGI-121 PF08617.5 gi|407465419|ref|YP_006776301.1| - 9.9e-10 38.3 6.0 1.5e-09 37.7 4.2 1.4 1 0 0 1 1 1 1 Kinase binding protein CGI-121 Urm1 PF09138.6 gi|407465419|ref|YP_006776301.1| - 0.00015 21.8 0.6 0.00064 19.7 0.1 2.4 2 1 0 2 2 2 1 Urm1 (Ubiquitin related modifier) DUF3324 PF11797.3 gi|407465419|ref|YP_006776301.1| - 0.011 15.4 1.6 0.017 14.8 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function C-terminal (DUF3324) Ribosomal_S17e PF00833.13 gi|407465420|ref|YP_006776302.1| - 1.7e-20 72.9 2.3 2e-20 72.7 1.6 1.1 1 0 0 1 1 1 1 Ribosomal S17 Amido_AtzD_TrzD PF09663.5 gi|407465420|ref|YP_006776302.1| - 0.052 12.1 0.2 0.059 11.9 0.1 1.0 1 0 0 1 1 1 0 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) TatD_DNase PF01026.16 gi|407465421|ref|YP_006776303.1| - 5.1e-44 150.3 0.0 5.8e-44 150.2 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase CBFD_NFYB_HMF PF00808.18 gi|407465422|ref|YP_006776304.1| - 1.7e-12 47.1 0.5 1.9e-12 47.0 0.3 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|407465422|ref|YP_006776304.1| - 1.2e-06 28.5 0.2 1.5e-06 28.2 0.2 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.1 gi|407465422|ref|YP_006776304.1| - 6.4e-05 23.0 0.0 7.2e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Kinetochore component CENP-S TFIID_20kDa PF03847.8 gi|407465422|ref|YP_006776304.1| - 0.0035 17.5 0.1 0.0039 17.4 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A TFIID-31kDa PF02291.10 gi|407465422|ref|YP_006776304.1| - 0.008 15.9 0.0 0.0089 15.8 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit Bromo_TP PF07524.8 gi|407465422|ref|YP_006776304.1| - 0.0087 15.7 0.0 0.0093 15.6 0.0 1.1 1 0 0 1 1 1 1 Bromodomain associated TAF PF02969.12 gi|407465422|ref|YP_006776304.1| - 0.18 11.7 0.9 0.2 11.6 0.6 1.1 1 0 0 1 1 1 0 TATA box binding protein associated factor (TAF) Cupredoxin_1 PF13473.1 gi|407465423|ref|YP_006776305.1| - 1.6e-07 31.1 0.0 3.6e-07 30.0 0.0 1.7 1 1 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|407465423|ref|YP_006776305.1| - 1.7e-07 31.3 0.1 1.2e-06 28.6 0.1 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family DUF863 PF05904.6 gi|407465423|ref|YP_006776305.1| - 0.019 13.2 0.0 0.023 12.9 0.0 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) AIPR PF10592.4 gi|407465424|ref|YP_006776306.1| - 3.9e-64 216.8 6.9 3.9e-64 216.8 4.8 2.5 3 0 0 3 3 3 1 AIPR protein ZZ PF00569.12 gi|407465425|ref|YP_006776307.1| - 0.0026 17.2 1.6 0.01 15.3 1.1 1.8 1 1 0 1 1 1 1 Zinc finger, ZZ type DUF4428 PF14471.1 gi|407465425|ref|YP_006776307.1| - 0.04 13.6 2.7 0.071 12.8 1.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) DUF4475 PF14753.1 gi|407465426|ref|YP_006776308.1| - 0.0072 15.8 1.5 0.011 15.2 1.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4475) HTH_45 PF14947.1 gi|407465427|ref|YP_006776309.1| - 4.5e-15 55.2 0.2 5.2e-15 55.0 0.1 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.1 gi|407465427|ref|YP_006776309.1| - 0.00046 20.1 0.2 0.00059 19.8 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|407465427|ref|YP_006776309.1| - 0.0032 17.5 0.0 0.0077 16.3 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulator Mrr_N PF14338.1 gi|407465427|ref|YP_006776309.1| - 0.0036 17.3 0.0 0.0051 16.8 0.0 1.2 1 0 0 1 1 1 1 Mrr N-terminal domain RNA_pol_Rpc34 PF05158.7 gi|407465427|ref|YP_006776309.1| - 0.0073 15.5 0.1 0.0092 15.1 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit Ribosomal_S19e PF01090.14 gi|407465427|ref|YP_006776309.1| - 0.0094 15.3 0.0 0.01 15.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S19e RPA_C PF08784.6 gi|407465427|ref|YP_006776309.1| - 0.014 15.7 0.1 0.019 15.3 0.0 1.2 1 0 0 1 1 1 0 Replication protein A C terminal TrmB PF01978.14 gi|407465427|ref|YP_006776309.1| - 0.031 13.9 0.0 0.042 13.5 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF4364 PF14277.1 gi|407465427|ref|YP_006776309.1| - 0.045 13.3 0.1 0.047 13.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) MarR PF01047.17 gi|407465427|ref|YP_006776309.1| - 0.1 12.3 0.1 0.18 11.5 0.1 1.4 1 0 0 1 1 1 0 MarR family DUF4229 PF14012.1 gi|407465428|ref|YP_006776310.1| - 0.05 13.5 0.7 0.088 12.7 0.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4229) UPF0104 PF03706.8 gi|407465428|ref|YP_006776310.1| - 0.095 11.9 0.0 0.095 11.9 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0104) Imm6 PF14434.1 gi|407465428|ref|YP_006776310.1| - 0.12 12.0 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 Immunity protein Imm6 DUF4381 PF14316.1 gi|407465428|ref|YP_006776310.1| - 0.17 12.0 0.1 0.17 12.0 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) ABC2_membrane_5 PF13346.1 gi|407465428|ref|YP_006776310.1| - 0.28 10.4 3.7 0.44 9.8 2.5 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein RHH_1 PF01402.16 gi|407465432|ref|YP_006776314.1| - 0.072 13.0 0.8 0.23 11.4 0.0 2.2 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family Z1 PF10593.4 gi|407465432|ref|YP_006776314.1| - 0.67 9.1 4.6 0.2 10.8 0.9 1.7 2 0 0 2 2 2 0 Z1 domain PIN PF01850.16 gi|407465433|ref|YP_006776315.1| - 4e-08 33.6 0.0 4.7e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 PIN domain PIN_4 PF13638.1 gi|407465433|ref|YP_006776315.1| - 0.094 12.8 0.1 0.16 12.0 0.1 1.6 1 1 0 1 1 1 0 PIN domain RNase_H_2 PF13482.1 gi|407465434|ref|YP_006776316.1| - 1.4e-05 24.9 0.1 4.7e-05 23.2 0.0 1.8 1 1 0 1 1 1 1 RNase_H superfamily RNase_T PF00929.19 gi|407465434|ref|YP_006776316.1| - 0.13 12.5 0.5 0.28 11.4 0.1 1.7 2 0 0 2 2 2 0 Exonuclease Endonuc_Holl PF10107.4 gi|407465435|ref|YP_006776317.1| - 1.2e-06 28.2 0.2 1.7e-06 27.8 0.2 1.1 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase VRR_NUC PF08774.6 gi|407465435|ref|YP_006776317.1| - 0.067 13.2 0.0 0.096 12.7 0.0 1.3 1 0 0 1 1 1 0 VRR-NUC domain Borrelia_lipo_1 PF05714.6 gi|407465436|ref|YP_006776318.1| - 0.036 13.1 0.9 0.043 12.9 0.6 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi virulent strain associated lipoprotein FlaC_arch PF05377.6 gi|407465438|ref|YP_006776320.1| - 0.0024 17.7 1.2 0.01 15.7 0.2 2.3 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) DUF4404 PF14357.1 gi|407465438|ref|YP_006776320.1| - 0.0081 16.5 3.2 0.14 12.6 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4404) DUF4164 PF13747.1 gi|407465438|ref|YP_006776320.1| - 0.16 12.1 2.6 0.21 11.7 0.6 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) HtrL_YibB PF09612.5 gi|407465438|ref|YP_006776320.1| - 0.19 10.9 5.0 0.14 11.4 2.1 1.6 1 1 0 2 2 2 0 Bacterial protein of unknown function (HtrL_YibB) Remorin_C PF03763.8 gi|407465438|ref|YP_006776320.1| - 0.36 10.3 6.8 0.87 9.1 4.7 1.6 1 0 0 1 1 1 0 Remorin, C-terminal region SseC PF04888.7 gi|407465438|ref|YP_006776320.1| - 3.4 6.9 8.6 1 8.6 4.0 1.5 2 0 0 2 2 2 0 Secretion system effector C (SseC) like family DNA_methylase PF00145.12 gi|407465440|ref|YP_006776322.1| - 4.4e-92 308.7 0.0 5.4e-92 308.4 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Vsr PF03852.10 gi|407465441|ref|YP_006776323.1| - 1.2e-18 66.5 0.4 1.2e-18 66.5 0.3 1.8 2 0 0 2 2 2 1 DNA mismatch endonuclease Vsr DUF559 PF04480.7 gi|407465441|ref|YP_006776323.1| - 2.7e-06 27.0 1.1 0.00025 20.6 0.7 2.5 1 1 1 2 2 2 1 Protein of unknown function (DUF559) PAE PF03283.8 gi|407465441|ref|YP_006776323.1| - 0.053 12.1 0.0 0.065 11.8 0.0 1.2 1 0 0 1 1 1 0 Pectinacetylesterase DUF2502 PF10697.4 gi|407465441|ref|YP_006776323.1| - 1.8 8.7 7.7 3.4 7.8 5.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2502) GrpE PF01025.14 gi|407465442|ref|YP_006776324.1| - 0.089 12.3 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 GrpE XPG_I PF00867.13 gi|407465442|ref|YP_006776324.1| - 0.13 12.3 0.3 0.6 10.2 0.0 2.0 2 1 0 2 2 2 0 XPG I-region PGM_PMM_I PF02878.11 gi|407465443|ref|YP_006776325.1| - 6.6e-24 83.9 0.0 1.9e-23 82.5 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.11 gi|407465443|ref|YP_006776325.1| - 4.1e-16 59.0 0.0 7.8e-16 58.1 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.11 gi|407465443|ref|YP_006776325.1| - 5.3e-14 52.4 0.0 1.2e-13 51.2 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.15 gi|407465443|ref|YP_006776325.1| - 1.1e-07 31.6 0.1 3.4e-07 30.1 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain AIRS PF00586.19 gi|407465444|ref|YP_006776326.1| - 8.6e-15 54.7 0.0 1.6e-14 53.9 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|407465444|ref|YP_006776326.1| - 2.4e-05 24.3 0.0 3.8e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain PSII_Pbs27 PF13326.1 gi|407465444|ref|YP_006776326.1| - 0.072 13.0 0.0 1.1 9.1 0.0 2.1 2 0 0 2 2 2 0 Photosystem II Pbs27 Ribosomal_S11 PF00411.14 gi|407465446|ref|YP_006776328.1| - 4e-38 129.9 0.8 6.5e-38 129.2 0.5 1.3 1 0 0 1 1 1 1 Ribosomal protein S11 Tagatose_6_P_K PF08013.6 gi|407465446|ref|YP_006776328.1| - 0.18 10.1 0.4 0.58 8.5 0.0 1.9 2 0 0 2 2 2 0 Tagatose 6 phosphate kinase EcoEI_R_C PF08463.5 gi|407465447|ref|YP_006776329.1| - 0.12 12.2 0.1 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 EcoEI R protein C-terminal RtcB PF01139.12 gi|407465449|ref|YP_006776331.1| - 1.9e-150 501.5 0.1 2.2e-150 501.3 0.1 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Complex1_LYR PF05347.10 gi|407465449|ref|YP_006776331.1| - 0.032 14.0 0.2 0.11 12.3 0.0 1.9 2 0 0 2 2 2 0 Complex 1 protein (LYR family) DUF3492 PF11997.3 gi|407465449|ref|YP_006776331.1| - 0.056 12.9 0.0 0.093 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3492) DUF2589 PF11655.3 gi|407465450|ref|YP_006776332.1| - 1.4 9.0 6.5 1.6 8.8 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2589) MBF1 PF08523.5 gi|407465450|ref|YP_006776332.1| - 2.8 8.0 11.9 6.7 6.8 8.3 1.6 1 1 0 1 1 1 0 Multiprotein bridging factor 1 RNA_pol_Rpc82 PF05645.8 gi|407465450|ref|YP_006776332.1| - 3.8 6.9 9.0 4.4 6.7 6.2 1.0 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 Borrelia_P83 PF05262.6 gi|407465450|ref|YP_006776332.1| - 4 5.6 13.5 3.9 5.6 9.3 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein Usp PF00582.21 gi|407465453|ref|YP_006776335.1| - 4.3e-31 107.9 0.0 4.9e-31 107.8 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF3173 PF11372.3 gi|407465453|ref|YP_006776335.1| - 0.031 13.8 0.0 0.15 11.6 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3173) CBS PF00571.23 gi|407465454|ref|YP_006776336.1| - 3.7e-27 93.8 5.8 4.6e-15 55.1 0.3 2.1 2 0 0 2 2 2 2 CBS domain DisA_N PF02457.11 gi|407465454|ref|YP_006776336.1| - 0.084 12.0 0.1 0.2 10.7 0.0 1.7 2 0 0 2 2 2 0 DisA bacterial checkpoint controller nucleotide-binding Yip1 PF04893.12 gi|407465455|ref|YP_006776337.1| - 0.0093 15.4 0.1 0.011 15.2 0.1 1.1 1 0 0 1 1 1 1 Yip1 domain Lyase_1 PF00206.15 gi|407465456|ref|YP_006776338.1| - 1.6e-49 168.8 2.6 2.1e-49 168.4 1.8 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.4 gi|407465456|ref|YP_006776338.1| - 3.2e-19 68.7 0.0 8e-19 67.4 0.0 1.7 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus Asn_synthase PF00733.16 gi|407465457|ref|YP_006776339.1| - 1.6e-29 103.1 0.0 3.5e-29 102.0 0.0 1.5 1 1 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|407465457|ref|YP_006776339.1| - 9.7e-06 24.6 0.2 5.1e-05 22.2 0.1 2.0 2 0 0 2 2 2 1 NAD synthase QueC PF06508.8 gi|407465457|ref|YP_006776339.1| - 0.0037 16.5 0.0 0.0076 15.5 0.0 1.6 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC DUF2683 PF10884.3 gi|407465457|ref|YP_006776339.1| - 0.013 15.4 0.3 0.074 12.9 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2683) ATP_bind_3 PF01171.15 gi|407465457|ref|YP_006776339.1| - 0.059 12.8 0.2 0.2 11.1 0.1 1.9 2 1 0 2 2 2 0 PP-loop family Pterin_4a PF01329.14 gi|407465458|ref|YP_006776340.1| - 1.5e-32 111.2 0.1 1.5e-32 111.1 0.1 1.0 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase IF-2 PF11987.3 gi|407465458|ref|YP_006776340.1| - 0.013 15.3 0.1 0.032 14.0 0.0 1.6 1 1 1 2 2 2 0 Translation-initiation factor 2 PTPS PF01242.14 gi|407465459|ref|YP_006776341.1| - 5.8e-20 71.2 0.6 2.2e-19 69.3 0.0 1.9 2 0 0 2 2 2 1 6-pyruvoyl tetrahydropterin synthase tRNA-synt_1 PF00133.17 gi|407465460|ref|YP_006776342.1| - 5.9e-110 368.0 0.6 3.1e-109 365.6 0.0 2.1 2 1 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|407465460|ref|YP_006776342.1| - 2.9e-30 105.0 3.3 2.9e-30 105.0 2.3 2.1 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|407465460|ref|YP_006776342.1| - 8.5e-25 87.2 2.5 1.6e-12 46.8 0.0 3.8 4 1 0 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.1 gi|407465460|ref|YP_006776342.1| - 0.00029 20.2 0.6 0.084 12.1 0.0 3.0 2 1 1 3 3 3 2 Leucyl-tRNA synthetase, Domain 2 DUF2286 PF10051.4 gi|407465460|ref|YP_006776342.1| - 0.0053 16.4 1.5 0.034 13.8 0.3 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2286) Spond_N PF06468.8 gi|407465462|ref|YP_006776344.1| - 2.1e-11 43.9 0.0 2.8e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 Spondin_N Arteri_Gl PF00951.13 gi|407465463|ref|YP_006776345.1| - 1.4 8.5 8.4 1.3 8.6 5.6 1.2 1 1 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF2873 PF11395.3 gi|407465463|ref|YP_006776345.1| - 1.5 8.4 4.7 1.6 8.3 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) HTH_5 PF01022.15 gi|407465464|ref|YP_006776346.1| - 6.5e-05 22.5 0.2 0.00028 20.4 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.1 gi|407465464|ref|YP_006776346.1| - 0.00031 20.4 2.9 0.00044 20.0 2.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.14 gi|407465464|ref|YP_006776346.1| - 0.0025 17.4 0.1 0.0041 16.7 0.1 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|407465464|ref|YP_006776346.1| - 0.0028 17.4 0.0 0.0044 16.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|407465464|ref|YP_006776346.1| - 0.0046 16.3 0.9 0.0057 16.0 0.2 1.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Phage_rep_org_N PF09681.5 gi|407465464|ref|YP_006776346.1| - 0.0094 15.5 0.5 0.012 15.2 0.3 1.1 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_11 PF08279.7 gi|407465464|ref|YP_006776346.1| - 0.018 14.7 0.3 0.036 13.6 0.0 1.7 2 0 0 2 2 2 0 HTH domain B-block_TFIIIC PF04182.7 gi|407465464|ref|YP_006776346.1| - 0.068 13.0 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC MarR PF01047.17 gi|407465464|ref|YP_006776346.1| - 0.14 11.8 0.1 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 MarR family DM13 PF10517.4 gi|407465465|ref|YP_006776347.1| - 4.2e-28 97.8 0.0 4.7e-28 97.7 0.0 1.0 1 0 0 1 1 1 1 Electron transfer DM13 FUR PF01475.14 gi|407465468|ref|YP_006776350.1| - 0.074 12.9 0.2 0.088 12.7 0.1 1.1 1 0 0 1 1 1 0 Ferric uptake regulator family UBN2 PF14223.1 gi|407465468|ref|YP_006776350.1| - 0.3 10.9 4.3 0.38 10.5 1.3 1.9 1 1 1 2 2 2 0 gag-polypeptide of LTR copia-type AsnC_trans_reg PF01037.16 gi|407465469|ref|YP_006776351.1| - 1.5e-06 27.8 0.0 1.8e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 AsnC family SSPI PF14098.1 gi|407465469|ref|YP_006776351.1| - 0.081 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Small, acid-soluble spore protein I GYD PF08734.6 gi|407465469|ref|YP_006776351.1| - 0.14 11.9 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 GYD domain AsnC_trans_reg PF01037.16 gi|407465470|ref|YP_006776352.1| - 2.1e-20 72.1 0.0 2.6e-11 43.0 0.0 2.2 2 0 0 2 2 2 2 AsnC family ACT_4 PF13291.1 gi|407465470|ref|YP_006776352.1| - 0.056 13.7 1.0 80 3.6 0.0 4.0 4 0 0 4 4 4 0 ACT domain DUF1657 PF07870.6 gi|407465471|ref|YP_006776353.1| - 0.13 11.9 0.4 0.2 11.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1657) AsnC_trans_reg PF01037.16 gi|407465472|ref|YP_006776354.1| - 5.2e-17 61.3 0.1 8.3e-17 60.6 0.1 1.3 1 0 0 1 1 1 1 AsnC family HTH_24 PF13412.1 gi|407465472|ref|YP_006776354.1| - 4.7e-11 41.8 4.3 5.1e-11 41.7 1.7 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|407465472|ref|YP_006776354.1| - 3.2e-10 39.3 2.4 5.5e-10 38.6 1.7 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.7 gi|407465472|ref|YP_006776354.1| - 0.00013 21.5 1.2 0.00033 20.2 0.8 1.7 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.2 gi|407465472|ref|YP_006776354.1| - 0.00069 19.3 0.1 0.0013 18.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DDRGK PF09756.4 gi|407465472|ref|YP_006776354.1| - 0.0084 15.5 0.9 0.029 13.7 0.1 1.9 2 0 0 2 2 2 1 DDRGK domain Mga PF05043.8 gi|407465472|ref|YP_006776354.1| - 0.0093 16.2 0.1 0.022 15.0 0.1 1.6 1 0 0 1 1 1 1 Mga helix-turn-helix domain HTH_27 PF13463.1 gi|407465472|ref|YP_006776354.1| - 0.011 16.0 0.4 0.024 14.9 0.2 1.6 2 0 0 2 2 1 0 Winged helix DNA-binding domain HTH_34 PF13601.1 gi|407465472|ref|YP_006776354.1| - 0.063 13.3 1.5 0.1 12.6 0.1 1.9 3 0 0 3 3 3 0 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|407465472|ref|YP_006776354.1| - 0.07 12.8 0.1 0.14 11.8 0.1 1.4 1 0 0 1 1 1 0 MarR family MarR PF01047.17 gi|407465472|ref|YP_006776354.1| - 0.082 12.6 0.3 0.24 11.1 0.1 1.8 2 0 0 2 2 2 0 MarR family TrmB PF01978.14 gi|407465472|ref|YP_006776354.1| - 0.1 12.3 0.1 0.18 11.5 0.1 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB SpoVIF PF14069.1 gi|407465472|ref|YP_006776354.1| - 0.11 12.1 1.6 0.13 11.9 0.3 1.8 2 0 0 2 2 2 0 Stage VI sporulation protein F HTH_DeoR PF08220.7 gi|407465472|ref|YP_006776354.1| - 0.12 11.9 0.5 0.3 10.6 0.3 1.6 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_10 PF04967.7 gi|407465472|ref|YP_006776354.1| - 0.15 11.6 0.3 0.36 10.4 0.2 1.7 1 0 0 1 1 1 0 HTH DNA binding domain Clavanin PF05452.6 gi|407465473|ref|YP_006776355.1| - 0.029 14.3 0.7 0.04 13.9 0.5 1.2 1 0 0 1 1 1 0 Clavanin AsnC_trans_reg PF01037.16 gi|407465476|ref|YP_006776358.1| - 6.8e-12 44.9 0.0 9.2e-12 44.4 0.0 1.2 1 0 0 1 1 1 1 AsnC family Reo_sigmaC PF04582.7 gi|407465476|ref|YP_006776358.1| - 0.13 11.3 0.2 0.15 11.1 0.2 1.0 1 0 0 1 1 1 0 Reovirus sigma C capsid protein ACT_4 PF13291.1 gi|407465476|ref|YP_006776358.1| - 0.34 11.2 2.3 6.7 7.1 0.3 2.2 1 1 1 2 2 2 0 ACT domain RNA_pol_3_Rpc31 PF11705.3 gi|407465476|ref|YP_006776358.1| - 1 9.2 10.6 1.2 9.0 7.4 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 Pro_dh PF01619.13 gi|407465477|ref|YP_006776359.1| - 3e-41 141.4 1.3 5.5e-41 140.5 0.9 1.4 1 1 0 1 1 1 1 Proline dehydrogenase KMP11 PF03037.11 gi|407465477|ref|YP_006776359.1| - 0.14 12.7 0.1 0.14 12.7 0.1 2.3 2 0 0 2 2 2 0 Kinetoplastid membrane protein 11 Aldedh PF00171.17 gi|407465478|ref|YP_006776360.1| - 6.7e-137 456.5 0.1 8.9e-137 456.1 0.1 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|407465478|ref|YP_006776360.1| - 0.024 13.3 0.1 0.085 11.5 0.1 1.9 1 1 0 1 1 1 0 Acyl-CoA reductase (LuxC) Arginase PF00491.16 gi|407465479|ref|YP_006776361.1| - 3.4e-63 213.5 0.0 3.8e-63 213.3 0.0 1.0 1 0 0 1 1 1 1 Arginase family PTase_Orf2 PF11468.3 gi|407465479|ref|YP_006776361.1| - 0.0038 16.5 0.0 0.0053 16.0 0.0 1.2 1 0 0 1 1 1 1 Aromatic prenyltransferase Orf2 Whib PF02467.11 gi|407465480|ref|YP_006776362.1| - 0.13 12.6 0.1 0.77 10.1 0.0 1.9 2 0 0 2 2 2 0 Transcription factor WhiB SNO PF01174.14 gi|407465482|ref|YP_006776364.1| - 5.6e-50 169.5 0.2 6.4e-50 169.3 0.1 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.23 gi|407465482|ref|YP_006776364.1| - 6.1e-15 55.1 0.0 9e-15 54.6 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|407465482|ref|YP_006776364.1| - 4.9e-14 52.2 0.0 9e-14 51.3 0.0 1.4 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.12 gi|407465482|ref|YP_006776364.1| - 3.4e-06 26.8 0.2 6.3e-06 26.0 0.1 1.4 1 1 0 1 1 1 1 Peptidase family S51 Peptidase_C26 PF07722.8 gi|407465482|ref|YP_006776364.1| - 1.8e-05 24.3 0.1 0.00024 20.6 0.0 2.3 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.19 gi|407465482|ref|YP_006776364.1| - 0.00017 21.0 0.0 0.00034 20.0 0.0 1.4 1 1 0 1 1 1 1 DJ-1/PfpI family BPL_N PF09825.4 gi|407465482|ref|YP_006776364.1| - 0.0011 17.8 0.0 0.41 9.3 0.0 2.5 2 1 0 2 2 2 2 Biotin-protein ligase, N terminal DUF4066 PF13278.1 gi|407465482|ref|YP_006776364.1| - 0.0098 15.1 0.1 0.02 14.1 0.1 1.4 1 0 0 1 1 1 1 Putative amidotransferase SOR_SNZ PF01680.12 gi|407465483|ref|YP_006776365.1| - 2.6e-88 295.0 4.4 4.3e-88 294.3 3.1 1.3 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.9 gi|407465483|ref|YP_006776365.1| - 1.5e-07 30.7 1.2 2.7e-05 23.3 0.0 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.10 gi|407465483|ref|YP_006776365.1| - 0.00013 21.2 2.5 0.028 13.5 0.0 2.3 2 0 0 2 2 2 2 Nitronate monooxygenase IGPS PF00218.16 gi|407465483|ref|YP_006776365.1| - 0.00034 19.7 0.0 0.0039 16.2 0.0 2.3 3 0 0 3 3 3 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.16 gi|407465483|ref|YP_006776365.1| - 0.001 18.4 1.3 0.063 12.5 0.1 3.2 2 2 0 2 2 2 1 Histidine biosynthesis protein Dus PF01207.12 gi|407465483|ref|YP_006776365.1| - 0.001 17.9 0.5 0.59 8.9 0.1 2.2 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) OMPdecase PF00215.19 gi|407465483|ref|YP_006776365.1| - 0.0041 16.5 0.4 0.56 9.5 0.0 2.5 2 1 1 3 3 3 2 Orotidine 5'-phosphate decarboxylase / HUMPS family NanE PF04131.9 gi|407465483|ref|YP_006776365.1| - 0.047 12.6 2.5 0.58 9.0 0.0 2.9 2 2 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase DSX_dimer PF08828.5 gi|407465483|ref|YP_006776365.1| - 0.076 12.5 0.2 4.6 6.8 0.0 2.7 2 0 0 2 2 2 0 Doublesex dimerisation domain Aconitase PF00330.15 gi|407465485|ref|YP_006776367.1| - 1.8e-151 504.7 0.1 2.4e-150 501.0 0.1 2.0 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.14 gi|407465485|ref|YP_006776367.1| - 7.9e-38 129.5 0.1 3.1e-37 127.6 0.0 2.0 2 0 0 2 2 2 1 Aconitase C-terminal domain DUF521 PF04412.8 gi|407465485|ref|YP_006776367.1| - 0.0086 14.6 0.0 0.014 13.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Cas_Cmr5 PF09701.5 gi|407465486|ref|YP_006776368.1| - 0.022 14.9 0.0 0.045 13.9 0.0 1.5 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr5) AsnC_trans_reg PF01037.16 gi|407465488|ref|YP_006776370.1| - 1.7e-11 43.6 0.0 2e-11 43.4 0.0 1.0 1 0 0 1 1 1 1 AsnC family EVE PF01878.13 gi|407465489|ref|YP_006776371.1| - 4.4e-39 133.7 0.7 5e-39 133.5 0.5 1.0 1 0 0 1 1 1 1 EVE domain DUF1175 PF06672.6 gi|407465489|ref|YP_006776371.1| - 0.028 13.7 0.1 0.094 12.0 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1175) B5 PF03484.10 gi|407465490|ref|YP_006776372.1| - 7e-22 77.0 0.0 2.8e-16 59.0 0.0 3.1 2 0 0 2 2 2 2 tRNA synthetase B5 domain B3_4 PF03483.12 gi|407465490|ref|YP_006776372.1| - 4.2e-12 45.8 0.2 7e-12 45.1 0.1 1.3 1 0 0 1 1 1 1 B3/4 domain tRNA-synt_2d PF01409.15 gi|407465490|ref|YP_006776372.1| - 0.00052 19.2 0.0 0.001 18.3 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2d PF01409.15 gi|407465491|ref|YP_006776373.1| - 5.7e-86 287.7 0.1 7.3e-86 287.3 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.15 gi|407465491|ref|YP_006776373.1| - 4.2e-05 22.4 0.3 0.0013 17.5 0.0 2.8 3 0 0 3 3 3 1 tRNA synthetases class II (D, K and N) tRNA-synt_2b PF00587.20 gi|407465491|ref|YP_006776373.1| - 0.00013 21.5 0.1 0.00029 20.4 0.1 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HTH_24 PF13412.1 gi|407465491|ref|YP_006776373.1| - 0.098 12.0 0.1 0.57 9.6 0.0 2.3 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding tRNA-synt_1b PF00579.20 gi|407465492|ref|YP_006776374.1| - 4.4e-31 108.1 0.0 6.8e-31 107.4 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.13 gi|407465492|ref|YP_006776374.1| - 0.0039 15.9 0.2 0.066 11.8 0.0 2.3 2 1 1 3 3 3 1 tRNA synthetases class I (K) GshA PF08886.6 gi|407465493|ref|YP_006776375.1| - 0.013 13.8 0.6 0.014 13.6 0.4 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase DUF1617 PF07761.7 gi|407465493|ref|YP_006776375.1| - 0.033 14.2 4.6 0.038 14.0 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1617) DUF970 PF06153.6 gi|407465493|ref|YP_006776375.1| - 0.069 13.1 0.2 0.11 12.5 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF970) zf-ribbon_3 PF13248.1 gi|407465494|ref|YP_006776376.1| - 0.0098 15.0 1.3 0.94 8.7 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|407465494|ref|YP_006776376.1| - 0.15 11.6 3.6 0.65 9.5 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-dskA_traR PF01258.12 gi|407465494|ref|YP_006776376.1| - 0.17 11.6 1.4 2.6 7.8 0.1 2.2 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger Prim_Zn_Ribbon PF08273.7 gi|407465494|ref|YP_006776376.1| - 5.3 7.2 7.2 0.41 10.7 0.3 2.4 3 0 0 3 3 3 0 Zinc-binding domain of primase-helicase DUF3997 PF13162.1 gi|407465495|ref|YP_006776377.1| - 0.09 12.6 0.8 0.11 12.3 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3997) CTP_transf_2 PF01467.21 gi|407465496|ref|YP_006776378.1| - 1.9e-14 53.9 0.0 1.1e-13 51.5 0.0 1.8 1 1 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|407465496|ref|YP_006776378.1| - 0.024 14.2 0.0 0.053 13.1 0.0 1.7 2 0 0 2 2 2 0 FAD synthetase A2M_N PF01835.14 gi|407465497|ref|YP_006776379.1| - 0.00014 22.0 0.1 0.00022 21.4 0.0 1.3 1 0 0 1 1 1 1 MG2 domain DUF1312 PF07009.6 gi|407465497|ref|YP_006776379.1| - 0.032 14.0 0.2 1.3 8.8 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1312) EndoU_bacteria PF14436.1 gi|407465497|ref|YP_006776379.1| - 0.17 11.7 3.3 0.28 11.0 0.4 2.1 2 0 0 2 2 2 0 Bacterial EndoU nuclease DUF4448 PF14610.1 gi|407465497|ref|YP_006776379.1| - 0.28 10.6 3.0 2.2 7.7 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4448) DUF1249 PF06853.7 gi|407465498|ref|YP_006776380.1| - 0.073 12.7 0.5 0.3 10.7 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1249) AhpC-TSA PF00578.16 gi|407465499|ref|YP_006776381.1| - 4.5e-22 78.0 0.1 5.9e-22 77.6 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|407465499|ref|YP_006776381.1| - 3e-14 52.7 0.1 3.8e-14 52.4 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_2 PF13098.1 gi|407465499|ref|YP_006776381.1| - 4.9e-07 29.9 0.3 6.9e-07 29.4 0.2 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.1 gi|407465499|ref|YP_006776381.1| - 7.4e-07 29.2 0.1 1.2e-06 28.5 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.15 gi|407465499|ref|YP_006776381.1| - 0.085 12.5 0.3 3.2 7.4 0.1 2.2 1 1 1 2 2 2 0 Thioredoxin Thioredoxin_3 PF13192.1 gi|407465499|ref|YP_006776381.1| - 0.091 12.5 0.5 3.6 7.4 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin domain HTH_24 PF13412.1 gi|407465500|ref|YP_006776382.1| - 3.9e-06 26.1 0.8 1.4e-05 24.3 0.1 2.3 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|407465500|ref|YP_006776382.1| - 6.4e-05 22.4 0.0 0.00021 20.8 0.0 1.9 1 0 0 1 1 1 1 Homeodomain-like domain B12-binding_2 PF02607.12 gi|407465500|ref|YP_006776382.1| - 0.0033 17.4 0.0 0.0066 16.4 0.0 1.4 1 0 0 1 1 1 1 B12 binding domain HTH_11 PF08279.7 gi|407465500|ref|YP_006776382.1| - 0.0045 16.6 0.0 0.013 15.1 0.0 1.7 1 0 0 1 1 1 1 HTH domain FaeA PF04703.7 gi|407465500|ref|YP_006776382.1| - 0.013 15.6 0.0 0.025 14.7 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein HTH_IclR PF09339.5 gi|407465500|ref|YP_006776382.1| - 0.016 14.7 0.0 0.041 13.4 0.0 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_28 PF13518.1 gi|407465500|ref|YP_006776382.1| - 0.037 14.0 0.0 0.15 12.1 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|407465500|ref|YP_006776382.1| - 0.11 12.3 0.0 0.31 10.8 0.0 1.8 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain zf-Mss51 PF13824.1 gi|407465501|ref|YP_006776383.1| - 0.039 13.8 0.1 0.93 9.4 0.0 2.2 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 TcdA_TcdB PF12919.2 gi|407465501|ref|YP_006776383.1| - 0.041 12.3 0.4 0.049 12.1 0.3 1.0 1 0 0 1 1 1 0 TcdA/TcdB catalytic glycosyltransferase domain LOH1CR12 PF10158.4 gi|407465501|ref|YP_006776383.1| - 0.076 12.8 0.2 0.33 10.7 0.1 1.9 1 1 1 2 2 2 0 Tumour suppressor protein MethyltransfD12 PF02086.10 gi|407465502|ref|YP_006776384.1| - 1.2e-64 218.3 1.3 1.4e-64 218.1 0.9 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_26 PF13659.1 gi|407465502|ref|YP_006776384.1| - 0.00041 20.3 0.0 0.00075 19.5 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain DUF2089 PF09862.4 gi|407465502|ref|YP_006776384.1| - 0.0041 16.8 0.1 0.0092 15.7 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2089) Cons_hypoth95 PF03602.10 gi|407465502|ref|YP_006776384.1| - 0.0099 15.2 0.0 0.077 12.3 0.0 2.3 3 0 0 3 3 3 1 Conserved hypothetical protein 95 Archaeal_AmoA PF12942.2 gi|407465503|ref|YP_006776385.1| - 9.5e-83 276.4 6.8 1.1e-82 276.2 4.7 1.0 1 0 0 1 1 1 1 Archaeal ammonia monooxygenase subunit A (AmoA) AmoC PF04896.7 gi|407465505|ref|YP_006776387.1| - 1.2e-15 57.2 4.6 1.6e-15 56.8 3.2 1.0 1 0 0 1 1 1 1 Ammonia monooxygenase/methane monooxygenase, subunit C Monooxygenase_B PF04744.7 gi|407465506|ref|YP_006776388.1| - 9.1e-07 27.9 0.0 2.1e-06 26.6 0.0 1.6 2 0 0 2 2 2 1 Monooxygenase subunit B protein cNMP_binding PF00027.24 gi|407465507|ref|YP_006776389.1| - 0.12 12.2 0.0 8.2 6.3 0.0 2.5 1 1 1 2 2 2 0 Cyclic nucleotide-binding domain DUF1469 PF07332.6 gi|407465510|ref|YP_006776392.1| - 0.11 12.1 0.6 0.11 12.1 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1469) Syndecan PF01034.15 gi|407465510|ref|YP_006776392.1| - 1.8 8.2 4.4 7.4 6.3 0.4 2.6 3 0 0 3 3 3 0 Syndecan domain Ribosomal_S13_N PF08069.7 gi|407465511|ref|YP_006776393.1| - 2e-26 91.6 0.2 3.5e-26 90.8 0.2 1.4 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.17 gi|407465511|ref|YP_006776393.1| - 3.7e-15 55.4 0.7 6.7e-15 54.6 0.5 1.4 1 0 0 1 1 1 1 Ribosomal protein S15 Nnf1 PF03980.9 gi|407465511|ref|YP_006776393.1| - 0.085 12.8 0.2 0.16 12.0 0.2 1.4 1 0 0 1 1 1 0 Nnf1 DHHA1 PF02272.14 gi|407465512|ref|YP_006776394.1| - 5.1e-10 38.9 0.3 2.2e-09 36.8 0.1 2.2 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.15 gi|407465512|ref|YP_006776394.1| - 3.5e-09 36.4 0.1 6.8e-09 35.5 0.1 1.4 1 0 0 1 1 1 1 DHH family Pcc1 PF09341.5 gi|407465513|ref|YP_006776395.1| - 9.5e-05 22.3 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 Transcription factor Pcc1 AsnA PF03590.10 gi|407465513|ref|YP_006776395.1| - 0.017 14.5 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 Aspartate-ammonia ligase Ribosomal_L12 PF00542.14 gi|407465513|ref|YP_006776395.1| - 0.028 14.4 0.2 0.069 13.1 0.1 1.6 1 0 0 1 1 1 0 Ribosomal protein L7/L12 C-terminal domain Mor PF08765.6 gi|407465513|ref|YP_006776395.1| - 0.059 13.1 0.0 0.068 12.9 0.0 1.1 1 0 0 1 1 1 0 Mor transcription activator family tRNA-synt_2b PF00587.20 gi|407465514|ref|YP_006776396.1| - 1.1e-34 119.5 0.1 1.7e-34 118.8 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.17 gi|407465514|ref|YP_006776396.1| - 1.3e-24 86.2 9.0 2.4e-24 85.4 6.3 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain tRNA-synt_His PF13393.1 gi|407465514|ref|YP_006776396.1| - 0.019 14.0 0.3 0.18 10.8 0.0 2.0 2 0 0 2 2 2 0 Histidyl-tRNA synthetase Baculo_PEP_C PF04513.7 gi|407465514|ref|YP_006776396.1| - 0.1 12.4 1.1 0.13 12.0 0.1 1.7 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus APG6 PF04111.7 gi|407465514|ref|YP_006776396.1| - 0.56 9.1 5.9 8.3 5.3 1.8 2.6 3 0 0 3 3 3 0 Autophagy protein Apg6 Ribosomal_S3Ae PF01015.13 gi|407465515|ref|YP_006776397.1| - 5.3e-65 218.4 4.1 5.9e-65 218.2 2.8 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family Band_7 PF01145.20 gi|407465515|ref|YP_006776397.1| - 0.1 12.5 0.4 0.58 10.0 0.3 2.1 1 1 0 1 1 1 0 SPFH domain / Band 7 family RNA_binding PF01877.12 gi|407465516|ref|YP_006776398.1| - 8.6e-27 93.5 5.2 1e-26 93.2 3.6 1.1 1 0 0 1 1 1 1 RNA binding Arg_tRNA_synt_N PF03485.11 gi|407465516|ref|YP_006776398.1| - 0.0066 16.9 0.2 0.012 16.0 0.1 1.5 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain HD_3 PF13023.1 gi|407465516|ref|YP_006776398.1| - 0.0083 15.8 1.0 0.011 15.5 0.5 1.4 1 1 0 1 1 1 1 HD domain MAS20 PF02064.10 gi|407465516|ref|YP_006776398.1| - 0.032 14.1 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 MAS20 protein import receptor DUF1053 PF06327.9 gi|407465516|ref|YP_006776398.1| - 0.11 12.8 3.3 0.11 12.8 1.2 1.8 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1053) DUF4508 PF14969.1 gi|407465516|ref|YP_006776398.1| - 0.11 12.5 0.1 0.21 11.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) FAD_binding_2 PF00890.19 gi|407465517|ref|YP_006776399.1| - 4.3e-06 25.8 0.0 0.015 14.1 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.19 gi|407465517|ref|YP_006776399.1| - 4.4e-06 25.8 0.0 0.045 12.6 0.0 2.1 1 1 1 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.7 gi|407465517|ref|YP_006776399.1| - 7e-05 21.9 0.0 0.00012 21.1 0.0 1.4 1 1 0 1 1 1 1 Lycopene cyclase protein FAD_oxidored PF12831.2 gi|407465517|ref|YP_006776399.1| - 0.00027 20.1 0.0 0.00059 19.0 0.0 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.9 gi|407465517|ref|YP_006776399.1| - 0.0011 17.6 0.0 0.0036 15.9 0.0 1.8 2 0 0 2 2 2 1 Tryptophan halogenase GDI PF00996.13 gi|407465517|ref|YP_006776399.1| - 0.0055 15.0 0.1 0.012 13.9 0.0 1.6 2 0 0 2 2 2 1 GDP dissociation inhibitor HI0933_like PF03486.9 gi|407465517|ref|YP_006776399.1| - 0.006 15.0 0.0 0.28 9.6 0.0 2.2 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.12 gi|407465517|ref|YP_006776399.1| - 0.027 13.5 0.1 0.19 10.8 0.0 2.2 2 0 0 2 2 2 0 Thi4 family FAD_binding_3 PF01494.14 gi|407465517|ref|YP_006776399.1| - 0.038 13.0 0.2 0.2 10.7 0.0 2.1 3 0 0 3 3 3 0 FAD binding domain NAD_binding_8 PF13450.1 gi|407465517|ref|YP_006776399.1| - 0.061 13.3 0.0 0.18 11.8 0.0 1.8 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 gi|407465517|ref|YP_006776399.1| - 0.093 12.5 4.7 0.48 10.2 3.3 2.3 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AAA_5 PF07728.9 gi|407465518|ref|YP_006776400.1| - 1.7e-24 86.0 0.0 2.5e-24 85.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|407465518|ref|YP_006776400.1| - 8e-13 48.1 0.0 1.2e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.24 gi|407465518|ref|YP_006776400.1| - 9.3e-08 32.3 0.0 1.7e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|407465518|ref|YP_006776400.1| - 2.7e-06 27.2 0.0 5.2e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.21 gi|407465518|ref|YP_006776400.1| - 4.1e-05 23.1 0.0 7.1e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.7 gi|407465518|ref|YP_006776400.1| - 5.2e-05 22.4 0.1 0.00083 18.4 0.0 2.2 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|407465518|ref|YP_006776400.1| - 0.0001 22.3 0.0 0.00023 21.1 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|407465518|ref|YP_006776400.1| - 0.00035 20.6 0.1 0.0011 19.1 0.1 2.0 1 1 0 1 1 1 1 AAA domain Miro PF08477.8 gi|407465518|ref|YP_006776400.1| - 0.0004 20.8 0.0 0.00086 19.8 0.0 1.6 1 0 0 1 1 1 1 Miro-like protein Arch_ATPase PF01637.13 gi|407465518|ref|YP_006776400.1| - 0.00041 20.1 0.1 0.00064 19.4 0.1 1.4 1 1 0 1 1 1 1 Archaeal ATPase AAA_17 PF13207.1 gi|407465518|ref|YP_006776400.1| - 0.00081 20.1 0.1 0.0016 19.2 0.1 1.7 1 1 0 1 1 1 1 AAA domain Sigma54_activ_2 PF14532.1 gi|407465518|ref|YP_006776400.1| - 0.002 18.1 0.0 0.0055 16.7 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain CbbQ_C PF08406.5 gi|407465518|ref|YP_006776400.1| - 0.0033 17.4 0.0 0.0057 16.6 0.0 1.5 1 0 0 1 1 1 1 CbbQ/NirQ/NorQ C-terminal Mg_chelatase PF01078.16 gi|407465518|ref|YP_006776400.1| - 0.0036 16.4 0.0 0.8 8.8 0.0 2.3 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.1 gi|407465518|ref|YP_006776400.1| - 0.0063 16.3 0.0 0.012 15.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.1 gi|407465518|ref|YP_006776400.1| - 0.0068 16.0 0.2 0.026 14.1 0.1 1.8 1 1 0 2 2 2 1 AAA domain AAA_28 PF13521.1 gi|407465518|ref|YP_006776400.1| - 0.0092 15.9 0.0 0.022 14.7 0.0 1.7 2 0 0 2 2 1 1 AAA domain MobB PF03205.9 gi|407465518|ref|YP_006776400.1| - 0.011 15.3 0.1 0.024 14.3 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_35 PF14516.1 gi|407465518|ref|YP_006776400.1| - 0.013 14.1 0.0 0.019 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain KAP_NTPase PF07693.9 gi|407465518|ref|YP_006776400.1| - 0.015 14.2 0.0 0.02 13.9 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain UPF0079 PF02367.12 gi|407465518|ref|YP_006776400.1| - 0.019 14.6 0.0 0.037 13.6 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 ABC_tran PF00005.22 gi|407465518|ref|YP_006776400.1| - 0.026 14.7 0.1 0.077 13.2 0.0 1.6 1 1 0 1 1 1 0 ABC transporter T2SE PF00437.15 gi|407465518|ref|YP_006776400.1| - 0.036 12.9 0.0 0.073 11.9 0.0 1.5 1 1 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.1 gi|407465518|ref|YP_006776400.1| - 0.041 13.4 0.0 0.085 12.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|407465518|ref|YP_006776400.1| - 0.051 12.9 0.0 0.094 12.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|407465518|ref|YP_006776400.1| - 0.051 13.8 0.3 0.092 13.0 0.2 1.7 1 1 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.10 gi|407465518|ref|YP_006776400.1| - 0.064 11.9 0.0 0.091 11.3 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein Viral_helicase1 PF01443.13 gi|407465518|ref|YP_006776400.1| - 0.068 12.6 0.0 0.096 12.1 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase DUF815 PF05673.8 gi|407465518|ref|YP_006776400.1| - 0.085 11.7 0.0 0.16 10.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) RNA12 PF10443.4 gi|407465518|ref|YP_006776400.1| - 0.085 11.3 0.0 0.13 10.7 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein KaiC PF06745.8 gi|407465518|ref|YP_006776400.1| - 0.086 11.9 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 KaiC DUF258 PF03193.11 gi|407465518|ref|YP_006776400.1| - 0.087 12.0 0.0 0.14 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 NACHT PF05729.7 gi|407465518|ref|YP_006776400.1| - 0.091 12.4 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_2 PF07724.9 gi|407465518|ref|YP_006776400.1| - 0.11 12.4 0.1 0.32 10.8 0.1 1.8 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) VWA PF00092.23 gi|407465519|ref|YP_006776401.1| - 7.9e-07 28.9 0.1 4e-06 26.6 0.0 2.1 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.1 gi|407465519|ref|YP_006776401.1| - 1.7e-06 28.2 0.0 3e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.1 gi|407465519|ref|YP_006776401.1| - 0.00071 19.3 0.0 0.0033 17.1 0.0 1.9 2 0 0 2 2 2 1 von Willebrand factor type A domain vWA-TerF-like PF10138.4 gi|407465519|ref|YP_006776401.1| - 0.013 15.3 0.0 0.052 13.3 0.0 2.0 1 1 0 1 1 1 0 vWA found in TerF C terminus PALP PF00291.20 gi|407465520|ref|YP_006776402.1| - 3.7e-22 78.9 0.1 2.7e-21 76.1 0.0 2.3 2 1 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme S10_plectin PF03501.10 gi|407465520|ref|YP_006776402.1| - 0.087 12.6 0.0 0.56 10.0 0.0 2.3 2 0 0 2 2 2 0 Plectin/S10 domain ASCH PF04266.9 gi|407465521|ref|YP_006776403.1| - 5e-09 36.4 0.0 6.8e-09 36.0 0.0 1.3 1 0 0 1 1 1 1 ASCH domain TBP PF00352.16 gi|407465522|ref|YP_006776404.1| - 1.2e-60 200.8 0.1 2.8e-30 103.4 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|407465522|ref|YP_006776404.1| - 0.0003 20.7 0.0 0.24 11.4 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NERD PF08378.6 gi|407465524|ref|YP_006776406.1| - 0.0013 18.9 1.0 0.024 14.8 0.1 2.3 2 0 0 2 2 2 2 Nuclease-related domain DUF3244 PF11589.3 gi|407465525|ref|YP_006776407.1| - 0.00024 20.7 1.0 0.0005 19.7 0.6 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF3244) MCE PF02470.15 gi|407465525|ref|YP_006776407.1| - 0.083 12.8 1.1 0.11 12.5 0.4 1.5 2 0 0 2 2 2 0 mce related protein Lum_binding PF00677.12 gi|407465525|ref|YP_006776407.1| - 0.11 12.4 1.5 0.21 11.5 1.0 1.7 1 1 0 1 1 1 0 Lumazine binding domain FlgD_ig PF13860.1 gi|407465525|ref|YP_006776407.1| - 0.11 12.2 2.7 0.2 11.4 1.2 2.0 1 1 1 2 2 2 0 FlgD Ig-like domain PPC PF04151.10 gi|407465525|ref|YP_006776407.1| - 5.5 8.0 9.3 63 4.6 6.3 2.3 1 1 0 1 1 1 0 Bacterial pre-peptidase C-terminal domain zf-3CxxC PF13695.1 gi|407465526|ref|YP_006776408.1| - 0.014 15.6 2.9 0.024 14.8 1.8 1.7 1 1 0 1 1 1 0 Zinc-binding domain HTH_10 PF04967.7 gi|407465527|ref|YP_006776409.1| - 0.013 15.0 0.0 0.022 14.3 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain HTH_Tnp_IS630 PF01710.11 gi|407465527|ref|YP_006776409.1| - 0.026 14.2 0.8 0.035 13.7 0.5 1.3 1 1 0 1 1 1 0 Transposase DUF3582 PF12122.3 gi|407465527|ref|YP_006776409.1| - 0.026 14.4 0.0 0.034 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3582) P-II PF00543.17 gi|407465528|ref|YP_006776410.1| - 2.3e-11 44.0 3.2 2.7e-11 43.8 2.2 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II AsnC_trans_reg PF01037.16 gi|407465529|ref|YP_006776411.1| - 3.6e-13 49.0 0.0 4.2e-13 48.8 0.0 1.0 1 0 0 1 1 1 1 AsnC family Dus PF01207.12 gi|407465530|ref|YP_006776412.1| - 1.3e-71 240.9 0.0 1.6e-71 240.7 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) DHO_dh PF01180.16 gi|407465530|ref|YP_006776412.1| - 3.9e-06 26.0 0.1 0.024 13.6 0.0 2.2 1 1 1 2 2 2 2 Dihydroorotate dehydrogenase Oxidored_FMN PF00724.15 gi|407465530|ref|YP_006776412.1| - 4.8e-06 25.8 0.0 7.5e-06 25.1 0.0 1.3 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family NanE PF04131.9 gi|407465530|ref|YP_006776412.1| - 0.0012 17.8 0.1 0.013 14.5 0.0 2.2 1 1 2 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.16 gi|407465530|ref|YP_006776412.1| - 0.0042 16.3 0.0 0.0067 15.7 0.0 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.20 gi|407465530|ref|YP_006776412.1| - 0.01 14.7 0.0 0.016 14.0 0.0 1.3 1 1 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain NIR_SIR_ferr PF03460.12 gi|407465530|ref|YP_006776412.1| - 0.019 14.5 0.0 0.11 12.1 0.0 2.2 3 0 0 3 3 3 0 Nitrite/Sulfite reductase ferredoxin-like half domain TSP_3 PF02412.13 gi|407465531|ref|YP_006776413.1| - 4.7e-31 105.9 208.7 0.00027 20.3 0.3 27.2 29 4 1 30 30 30 18 Thrombospondin type 3 repeat Tox-REase-5 PF15648.1 gi|407465531|ref|YP_006776413.1| - 0.0039 17.4 6.5 1.8 8.9 0.1 4.1 3 0 0 3 3 3 2 Restriction endonuclease fold toxin 5 NOPS PF08075.6 gi|407465531|ref|YP_006776413.1| - 0.018 15.4 42.1 6.2 7.3 0.1 13.0 13 0 0 13 13 13 0 NOPS (NUC059) domain TSP_3 PF02412.13 gi|407465532|ref|YP_006776414.1| - 3.8e-35 119.0 217.5 0.00033 20.0 0.3 27.1 28 6 3 31 31 31 17 Thrombospondin type 3 repeat NOPS PF08075.6 gi|407465532|ref|YP_006776414.1| - 1.5 9.2 43.4 16 5.9 0.1 13.3 14 2 1 15 15 15 0 NOPS (NUC059) domain MRP-S26 PF14943.1 gi|407465532|ref|YP_006776414.1| - 1.5 8.3 2.1 1.5e+02 1.8 0.0 3.3 3 0 0 3 3 3 0 Mitochondrial ribosome subunit S26 TSP_3 PF02412.13 gi|407465533|ref|YP_006776415.1| - 1.4e-46 155.6 251.8 0.00016 21.0 0.7 27.3 25 8 3 28 28 28 20 Thrombospondin type 3 repeat DUF282 PF03380.9 gi|407465533|ref|YP_006776415.1| - 0.0012 18.5 28.0 2 8.2 0.1 10.9 13 0 0 13 13 13 3 Caenorhabditis protein of unknown function, DUF282 Radical_SAM PF04055.16 gi|407465534|ref|YP_006776416.1| - 9.8e-19 68.1 0.1 5e-18 65.8 0.0 2.0 1 1 0 1 1 1 1 Radical SAM superfamily Wyosine_form PF08608.7 gi|407465534|ref|YP_006776416.1| - 1.2e-18 66.8 0.0 6.3e-18 64.6 0.0 2.2 2 1 0 2 2 2 1 Wyosine base formation Paf67 PF10255.4 gi|407465534|ref|YP_006776416.1| - 0.0001 21.3 0.6 0.00017 20.6 0.4 1.4 1 1 0 1 1 1 1 RNA polymerase I-associated factor PAF67 Fer4_14 PF13394.1 gi|407465534|ref|YP_006776416.1| - 0.0067 16.4 0.1 0.05 13.6 0.1 2.3 1 1 0 1 1 1 1 4Fe-4S single cluster domain Ham1p_like PF01725.11 gi|407465535|ref|YP_006776417.1| - 2e-44 151.2 0.0 2.2e-44 151.0 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Pkinase PF00069.20 gi|407465536|ref|YP_006776418.1| - 7.6e-12 44.9 0.1 1.1e-11 44.4 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain RIO1 PF01163.17 gi|407465536|ref|YP_006776418.1| - 1.8e-08 33.9 0.0 2.4e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.9 gi|407465536|ref|YP_006776418.1| - 7.6e-07 28.3 0.0 4.6e-06 25.8 0.0 2.1 2 1 1 3 3 3 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_Tyr PF07714.12 gi|407465536|ref|YP_006776418.1| - 6.1e-06 25.4 0.0 8e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.18 gi|407465536|ref|YP_006776418.1| - 3.5e-05 23.6 0.0 0.011 15.4 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family WaaY PF06176.6 gi|407465536|ref|YP_006776418.1| - 0.0055 15.9 0.5 0.015 14.5 0.3 1.8 1 1 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) TaqI_C PF12950.2 gi|407465536|ref|YP_006776418.1| - 0.089 12.5 0.7 0.2 11.4 0.5 1.8 1 1 0 1 1 1 0 TaqI-like C-terminal specificity domain bPH_3 PF14470.1 gi|407465537|ref|YP_006776419.1| - 0.0095 16.1 0.7 0.22 11.7 0.5 2.1 1 1 0 1 1 1 1 Bacterial PH domain Peptidase_M22 PF00814.20 gi|407465538|ref|YP_006776420.1| - 2.1e-73 247.1 0.0 2.5e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family DUF512 PF04459.7 gi|407465538|ref|YP_006776420.1| - 0.016 14.3 0.0 0.071 12.1 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF512) MMR_HSR1_C PF08438.5 gi|407465539|ref|YP_006776421.1| - 3.3e-29 101.2 0.0 1e-28 99.7 0.0 1.8 2 0 0 2 2 2 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.18 gi|407465539|ref|YP_006776421.1| - 1e-17 64.1 0.1 1e-16 60.9 0.0 2.5 2 1 0 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.16 gi|407465539|ref|YP_006776421.1| - 5.2e-10 39.0 0.2 1.6e-09 37.4 0.1 1.9 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 gi|407465539|ref|YP_006776421.1| - 4.3e-06 26.0 0.1 2.6e-05 23.5 0.0 2.2 2 0 0 2 2 2 1 Ferrous iron transport protein B YchF-GTPase_C PF06071.8 gi|407465539|ref|YP_006776421.1| - 0.015 15.1 0.0 0.04 13.6 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF933) Miro PF08477.8 gi|407465539|ref|YP_006776421.1| - 0.094 13.2 0.3 1.3 9.5 0.0 2.8 3 1 0 3 3 3 0 Miro-like protein AAA_18 PF13238.1 gi|407465540|ref|YP_006776422.1| - 1.4e-15 57.7 1.7 1.4e-15 57.7 1.2 1.7 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|407465540|ref|YP_006776422.1| - 1.3e-11 45.3 0.3 1.5e-11 45.1 0.2 1.4 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.1 gi|407465540|ref|YP_006776422.1| - 3.5e-06 27.0 2.4 0.012 15.5 0.1 2.6 1 1 2 3 3 3 2 Cytidylate kinase-like family KTI12 PF08433.5 gi|407465540|ref|YP_006776422.1| - 0.00023 20.4 2.3 0.00054 19.2 0.9 2.0 1 1 1 2 2 2 1 Chromatin associated protein KTI12 NTPase_1 PF03266.10 gi|407465540|ref|YP_006776422.1| - 0.00026 20.7 3.5 0.00048 19.8 0.3 2.6 2 1 0 2 2 2 1 NTPase AAA PF00004.24 gi|407465540|ref|YP_006776422.1| - 0.00062 19.9 0.1 0.011 15.9 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) CoaE PF01121.15 gi|407465540|ref|YP_006776422.1| - 0.0068 15.8 0.7 0.011 15.1 0.0 1.8 2 1 0 2 2 2 1 Dephospho-CoA kinase ArgK PF03308.11 gi|407465540|ref|YP_006776422.1| - 0.022 13.5 2.0 0.03 13.1 0.1 2.0 2 1 0 2 2 2 0 ArgK protein AAA_14 PF13173.1 gi|407465540|ref|YP_006776422.1| - 0.023 14.6 0.7 0.088 12.7 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|407465540|ref|YP_006776422.1| - 0.033 13.9 0.1 0.077 12.7 0.0 1.8 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) SKI PF01202.17 gi|407465540|ref|YP_006776422.1| - 0.033 14.0 1.1 0.12 12.2 0.8 2.0 1 1 0 1 1 1 0 Shikimate kinase Zeta_toxin PF06414.7 gi|407465540|ref|YP_006776422.1| - 0.043 12.9 0.1 0.23 10.5 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin AAA_22 PF13401.1 gi|407465540|ref|YP_006776422.1| - 0.046 13.8 0.1 0.2 11.8 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA_28 PF13521.1 gi|407465540|ref|YP_006776422.1| - 0.049 13.5 0.0 0.087 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain CRISPR_Cas2 PF09827.4 gi|407465540|ref|YP_006776422.1| - 0.062 13.4 2.5 0.079 13.1 0.2 2.1 2 0 0 2 2 2 0 CRISPR associated protein Cas2 DUF258 PF03193.11 gi|407465540|ref|YP_006776422.1| - 0.081 12.1 0.8 0.16 11.1 0.0 1.8 2 1 0 2 2 2 0 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|407465540|ref|YP_006776422.1| - 0.15 12.0 0.0 0.28 11.1 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.1 gi|407465540|ref|YP_006776422.1| - 0.16 11.7 0.1 0.3 10.8 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain DUF2025 PF09634.5 gi|407465540|ref|YP_006776422.1| - 0.18 11.5 1.0 7.7 6.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2025) Duffy_binding PF05424.6 gi|407465540|ref|YP_006776422.1| - 10 5.9 8.1 4.7 7.0 1.1 2.3 1 1 1 2 2 2 0 Duffy binding domain TGT PF01702.13 gi|407465541|ref|YP_006776423.1| - 5.9e-49 166.4 0.0 8.6e-49 165.9 0.0 1.2 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase DUF1749 PF08538.5 gi|407465541|ref|YP_006776423.1| - 0.05 12.4 0.0 0.09 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1749) Fer4 PF00037.22 gi|407465542|ref|YP_006776424.1| - 1.7e-11 43.1 10.3 6.6e-06 25.5 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|407465542|ref|YP_006776424.1| - 2.1e-10 40.0 7.5 3.6e-05 23.4 1.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|407465542|ref|YP_006776424.1| - 1.2e-09 38.4 3.8 1.7e-09 37.8 2.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|407465542|ref|YP_006776424.1| - 5.7e-09 35.6 3.2 9.5e-09 34.9 2.3 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|407465542|ref|YP_006776424.1| - 8e-09 34.9 9.0 0.00011 21.9 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|407465542|ref|YP_006776424.1| - 4.2e-08 32.9 1.4 6.2e-08 32.3 1.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|407465542|ref|YP_006776424.1| - 2.4e-06 27.8 4.9 0.008 16.5 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|407465542|ref|YP_006776424.1| - 3.1e-06 27.6 8.7 0.00094 19.7 6.2 2.4 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|407465542|ref|YP_006776424.1| - 1.7e-05 24.7 9.7 0.038 14.3 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|407465542|ref|YP_006776424.1| - 3.2e-05 24.0 6.9 0.00015 21.9 5.0 1.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|407465542|ref|YP_006776424.1| - 8.1e-05 23.2 1.5 0.3 11.8 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|407465542|ref|YP_006776424.1| - 0.00015 21.6 5.0 0.00042 20.2 3.4 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|407465542|ref|YP_006776424.1| - 0.0002 21.6 11.3 0.044 14.3 2.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|407465542|ref|YP_006776424.1| - 0.0023 18.2 6.4 0.05 13.9 4.4 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|407465542|ref|YP_006776424.1| - 0.0037 17.6 6.8 0.19 12.1 1.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain DUF3000 PF11452.3 gi|407465543|ref|YP_006776425.1| - 0.027 13.7 0.3 0.027 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3000) Beta-Casp PF10996.3 gi|407465544|ref|YP_006776426.1| - 2.6e-22 79.1 0.0 8.3e-22 77.4 0.0 1.8 2 0 0 2 2 2 1 Beta-Casp domain Lactamase_B PF00753.22 gi|407465544|ref|YP_006776426.1| - 6.8e-15 55.2 0.2 1.9e-14 53.7 0.1 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|407465544|ref|YP_006776426.1| - 1.2e-14 54.3 0.0 2.1e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain RMMBL PF07521.7 gi|407465544|ref|YP_006776426.1| - 2e-12 46.7 0.0 6.5e-12 45.0 0.0 1.9 2 0 0 2 2 2 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_3 PF13483.1 gi|407465544|ref|YP_006776426.1| - 3.2e-06 26.9 0.0 1.1e-05 25.1 0.0 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DUF2220 PF09983.4 gi|407465544|ref|YP_006776426.1| - 0.02 14.0 0.0 0.032 13.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria C-term(DUF2220) OGG_N PF07934.7 gi|407465545|ref|YP_006776427.1| - 3.5e-14 52.7 0.3 5.4e-13 48.9 0.2 2.4 1 1 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.20 gi|407465545|ref|YP_006776427.1| - 1e-11 45.0 0.0 1.9e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|407465545|ref|YP_006776427.1| - 0.0003 20.3 0.0 0.0023 17.5 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_2 PF12826.2 gi|407465545|ref|YP_006776427.1| - 0.044 13.6 0.0 0.25 11.2 0.0 2.3 3 0 0 3 3 3 0 Helix-hairpin-helix motif DUF3755 PF12579.3 gi|407465545|ref|YP_006776427.1| - 0.14 11.5 0.6 17 4.9 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3755) DoxA PF07680.6 gi|407465546|ref|YP_006776428.1| - 0.018 14.6 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 TQO small subunit DoxA GvpO PF05800.6 gi|407465546|ref|YP_006776428.1| - 0.053 13.4 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpO DUF4488 PF14869.1 gi|407465546|ref|YP_006776428.1| - 0.067 12.7 1.1 0.092 12.3 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4488) Copper-bind PF00127.15 gi|407465547|ref|YP_006776429.1| - 6.1e-06 26.3 0.0 9e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 gi|407465547|ref|YP_006776429.1| - 1.7e-05 24.6 0.0 2.5e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain Cytochrom_B_N_2 PF13631.1 gi|407465548|ref|YP_006776430.1| - 2.6e-24 85.9 5.9 2.6e-24 85.9 4.1 3.9 4 1 0 4 4 4 1 Cytochrome b(N-terminal)/b6/petB Cytochrom_B_C PF00032.12 gi|407465548|ref|YP_006776430.1| - 5.9e-07 29.6 3.5 5.9e-07 29.6 2.4 3.4 4 1 0 4 4 4 1 Cytochrome b(C-terminal)/b6/petD DUF4405 PF14358.1 gi|407465548|ref|YP_006776430.1| - 0.0029 17.6 3.0 0.0029 17.6 2.1 3.7 3 0 0 3 3 3 1 Domain of unknown function (DUF4405) DUF1418 PF07214.7 gi|407465548|ref|YP_006776430.1| - 0.23 11.0 3.5 0.1 12.2 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1418) TRIQK PF15168.1 gi|407465548|ref|YP_006776430.1| - 2.6 8.0 4.7 2.7 7.9 1.0 2.9 2 1 1 3 3 3 0 Triple QxxK/R motif-containing protein family S1FA PF04689.8 gi|407465548|ref|YP_006776430.1| - 6.2 6.7 6.8 0.55 10.1 0.1 2.7 3 0 0 3 3 3 0 DNA binding protein S1FA Rieske PF00355.21 gi|407465549|ref|YP_006776431.1| - 7.7e-09 35.0 0.0 1.2e-08 34.3 0.0 1.3 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain TAT_signal PF10518.4 gi|407465549|ref|YP_006776431.1| - 0.0008 19.2 0.9 0.0018 18.1 0.6 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.4 gi|407465549|ref|YP_006776431.1| - 0.0014 17.7 0.1 0.0035 16.4 0.0 1.6 1 0 0 1 1 1 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Peptidase_S8 PF00082.17 gi|407465550|ref|YP_006776432.1| - 2.8e-28 98.8 1.8 1.7e-27 96.2 1.3 2.2 1 1 0 1 1 1 1 Subtilase family DUF1034 PF06280.7 gi|407465550|ref|YP_006776432.1| - 3e-05 24.3 1.4 0.00045 20.6 0.0 2.5 2 0 0 2 2 2 1 Fn3-like domain (DUF1034) DUF916 PF06030.7 gi|407465550|ref|YP_006776432.1| - 0.013 15.3 0.2 0.85 9.4 0.0 3.6 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF916) Cna_B PF05738.8 gi|407465551|ref|YP_006776433.1| - 0.011 15.4 0.6 0.041 13.6 0.1 2.1 2 0 0 2 2 2 0 Cna protein B-type domain Reo_sigmaC PF04582.7 gi|407465551|ref|YP_006776433.1| - 0.012 14.7 2.9 0.02 14.0 2.0 1.3 1 0 0 1 1 1 0 Reovirus sigma C capsid protein DUF3407 PF11887.3 gi|407465551|ref|YP_006776433.1| - 0.065 12.5 0.2 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3407) He_PIG PF05345.7 gi|407465551|ref|YP_006776433.1| - 0.96 9.5 4.1 15 5.7 0.4 2.8 2 1 0 2 2 2 0 Putative Ig domain 3Beta_HSD PF01073.14 gi|407465553|ref|YP_006776435.1| - 4.5e-24 84.6 0.3 4.9e-24 84.5 0.2 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.16 gi|407465553|ref|YP_006776435.1| - 2.5e-21 76.2 0.0 2.7e-21 76.1 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.7 gi|407465553|ref|YP_006776435.1| - 8.8e-12 44.4 0.8 3.7e-09 35.8 0.6 2.0 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.10 gi|407465553|ref|YP_006776435.1| - 1.1e-10 40.9 0.1 1.3e-10 40.7 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.12 gi|407465553|ref|YP_006776435.1| - 2.2e-09 36.6 0.0 2.7e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.8 gi|407465553|ref|YP_006776435.1| - 4e-09 36.0 0.0 8.2e-09 35.0 0.0 1.5 1 1 1 2 2 2 1 NmrA-like family NAD_binding_10 PF13460.1 gi|407465553|ref|YP_006776435.1| - 7.5e-08 32.5 0.0 8.5e-08 32.4 0.0 1.0 1 0 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|407465553|ref|YP_006776435.1| - 1.1e-06 28.6 0.0 1.6e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase TrkA_N PF02254.13 gi|407465553|ref|YP_006776435.1| - 0.00033 20.6 0.1 0.00047 20.1 0.0 1.3 1 1 0 1 1 1 1 TrkA-N domain DapB_N PF01113.15 gi|407465553|ref|YP_006776435.1| - 0.00076 19.3 0.1 0.00088 19.1 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus KR PF08659.5 gi|407465553|ref|YP_006776435.1| - 0.0027 17.3 0.0 0.0031 17.1 0.0 1.2 1 0 0 1 1 1 1 KR domain Saccharop_dh PF03435.13 gi|407465553|ref|YP_006776435.1| - 0.0088 15.0 0.1 0.011 14.7 0.0 1.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase Methyltransf_31 PF13847.1 gi|407465553|ref|YP_006776435.1| - 0.015 14.8 0.2 0.017 14.7 0.1 1.1 1 0 0 1 1 1 0 Methyltransferase domain Semialdhyde_dh PF01118.19 gi|407465553|ref|YP_006776435.1| - 0.13 12.5 0.0 0.16 12.2 0.0 1.2 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Epimerase PF01370.16 gi|407465554|ref|YP_006776436.1| - 7e-15 55.0 0.0 9e-15 54.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Epimerase_Csub PF13950.1 gi|407465554|ref|YP_006776436.1| - 5.3e-06 26.2 0.0 7.6e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 UDP-glucose 4-epimerase C-term subunit Polysacc_synt_2 PF02719.10 gi|407465554|ref|YP_006776436.1| - 0.0016 17.4 0.0 0.002 17.1 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Glycos_transf_2 PF00535.21 gi|407465555|ref|YP_006776437.1| - 8.8e-26 90.5 0.2 1.2e-25 90.1 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|407465555|ref|YP_006776437.1| - 1e-07 31.9 0.0 1.4e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|407465555|ref|YP_006776437.1| - 0.00061 20.0 0.0 0.00099 19.3 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 2 DUF374 PF04028.8 gi|407465555|ref|YP_006776437.1| - 0.019 14.1 0.1 0.067 12.4 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF374) AlkA_N PF06029.6 gi|407465555|ref|YP_006776437.1| - 0.16 12.0 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 AlkA N-terminal domain Pox_A14 PF05767.7 gi|407465555|ref|YP_006776437.1| - 2.2 8.3 5.3 2.8 7.9 2.7 1.9 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 DUF95 PF01944.12 gi|407465556|ref|YP_006776438.1| - 1.9e-07 30.8 16.5 2.6e-07 30.4 11.5 1.0 1 0 0 1 1 1 1 Integral membrane protein DUF95 Sigma_reg_N PF13800.1 gi|407465556|ref|YP_006776438.1| - 3 7.9 6.8 0.66 10.0 0.2 2.3 2 1 1 3 3 3 0 Sigma factor regulator N-terminal P-II PF00543.17 gi|407465557|ref|YP_006776439.1| - 1.5e-28 99.2 1.1 1.7e-28 99.0 0.8 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II HTH_5 PF01022.15 gi|407465558|ref|YP_006776440.1| - 3.7e-07 29.7 0.1 6.5e-07 28.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|407465558|ref|YP_006776440.1| - 2.5e-06 26.7 0.6 4.6e-06 25.9 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|407465558|ref|YP_006776440.1| - 4.4e-06 26.3 0.0 8.4e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|407465558|ref|YP_006776440.1| - 0.00047 19.7 0.1 0.0011 18.5 0.1 1.6 1 0 0 1 1 1 1 HTH domain MarR PF01047.17 gi|407465558|ref|YP_006776440.1| - 0.00071 19.2 0.1 0.0016 18.1 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|407465558|ref|YP_006776440.1| - 0.0016 17.9 0.0 0.0025 17.3 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|407465558|ref|YP_006776440.1| - 0.0026 17.3 0.0 0.0045 16.6 0.0 1.3 1 0 0 1 1 1 1 MarR family DUF4423 PF14394.1 gi|407465558|ref|YP_006776440.1| - 0.0035 16.9 0.1 0.0076 15.8 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_34 PF13601.1 gi|407465558|ref|YP_006776440.1| - 0.0042 17.0 0.1 0.0078 16.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.1 gi|407465558|ref|YP_006776440.1| - 0.007 16.1 0.4 0.025 14.3 0.1 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DUF1724 PF08350.5 gi|407465558|ref|YP_006776440.1| - 0.012 15.1 0.0 0.024 14.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1724) TrmB PF01978.14 gi|407465558|ref|YP_006776440.1| - 0.014 15.0 0.0 0.027 14.1 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.1 gi|407465558|ref|YP_006776440.1| - 0.03 14.3 0.1 0.063 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.1 gi|407465558|ref|YP_006776440.1| - 0.033 14.4 0.0 0.057 13.7 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2661 PF10860.3 gi|407465558|ref|YP_006776440.1| - 0.046 13.9 1.8 0.11 12.6 1.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2661) IF2_N PF04760.10 gi|407465558|ref|YP_006776440.1| - 0.052 13.2 0.4 1.7 8.3 0.0 2.6 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region Phage_rep_org_N PF09681.5 gi|407465558|ref|YP_006776440.1| - 0.091 12.3 0.8 0.22 11.0 0.0 1.9 2 0 0 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_DeoR PF08220.7 gi|407465558|ref|YP_006776440.1| - 0.098 12.2 0.1 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_37 PF13744.1 gi|407465558|ref|YP_006776440.1| - 0.11 12.3 0.1 0.21 11.4 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.1 gi|407465558|ref|YP_006776440.1| - 0.12 12.5 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Fe_dep_repress PF01325.14 gi|407465558|ref|YP_006776440.1| - 0.24 11.3 0.8 0.52 10.2 0.0 2.0 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Guanylate_cyc PF00211.15 gi|407465559|ref|YP_006776441.1| - 5.9e-12 45.3 0.0 7.5e-12 44.9 0.0 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain PMC2NT PF08066.7 gi|407465559|ref|YP_006776441.1| - 0.026 14.8 0.0 0.047 13.9 0.0 1.4 1 0 0 1 1 1 0 PMC2NT (NUC016) domain Guanylate_cyc PF00211.15 gi|407465561|ref|YP_006776443.1| - 0.043 13.1 0.0 0.11 11.8 0.0 1.7 2 0 0 2 2 2 0 Adenylate and Guanylate cyclase catalytic domain A2M_N PF01835.14 gi|407465563|ref|YP_006776445.1| - 0.0094 16.1 0.1 0.036 14.3 0.0 2.0 1 0 0 1 1 1 1 MG2 domain Laminin_G_3 PF13385.1 gi|407465564|ref|YP_006776446.1| - 2.7e-43 147.9 13.9 2.8e-23 82.8 3.0 5.1 4 1 1 5 5 5 2 Concanavalin A-like lectin/glucanases superfamily CARDB PF07705.6 gi|407465564|ref|YP_006776446.1| - 1.1e-12 47.8 1.1 1.1e-12 47.8 0.7 3.5 3 0 0 3 3 3 1 CARDB Lectin_C PF00059.16 gi|407465564|ref|YP_006776446.1| - 5.2e-07 30.2 0.0 1.7e-06 28.6 0.0 1.8 1 0 0 1 1 1 1 Lectin C-type domain Pentaxin PF00354.12 gi|407465564|ref|YP_006776446.1| - 4.8e-05 22.8 0.0 0.0098 15.3 0.1 2.6 2 0 0 2 2 2 2 Pentaxin family Big_3_4 PF13754.1 gi|407465564|ref|YP_006776446.1| - 0.00035 20.8 4.6 0.00035 20.8 3.2 11.8 10 3 1 11 11 11 4 Bacterial Ig-like domain (group 3) Hexapep PF00132.19 gi|407465565|ref|YP_006776447.1| - 7.7e-15 53.6 19.2 6.4e-08 31.7 3.1 4.3 2 2 2 4 4 4 4 Bacterial transferase hexapeptide (six repeats) NTP_transferase PF00483.18 gi|407465565|ref|YP_006776447.1| - 1.1e-13 51.1 0.0 1.4e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep_2 PF14602.1 gi|407465565|ref|YP_006776447.1| - 2.1e-08 33.5 1.7 2.1e-08 33.5 1.2 3.3 2 1 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase Pentapeptide_3 PF13576.1 gi|407465565|ref|YP_006776447.1| - 0.049 13.5 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) NTP_transferase PF00483.18 gi|407465566|ref|YP_006776448.1| - 4.6e-35 121.1 0.0 5.5e-35 120.8 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|407465566|ref|YP_006776448.1| - 4e-11 43.2 0.0 4.6e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain RmlD_sub_bind PF04321.12 gi|407465567|ref|YP_006776449.1| - 2.1e-69 233.6 0.0 2.3e-69 233.4 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.16 gi|407465567|ref|YP_006776449.1| - 3.4e-26 92.1 0.0 5.8e-26 91.3 0.0 1.4 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.7 gi|407465567|ref|YP_006776449.1| - 4.3e-11 42.2 0.0 1.6e-08 33.7 0.0 2.4 1 1 1 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.10 gi|407465567|ref|YP_006776449.1| - 1.3e-08 34.0 2.3 1.4e-07 30.7 0.8 2.6 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|407465567|ref|YP_006776449.1| - 4.6e-07 30.0 0.0 1.5e-06 28.3 0.0 1.8 1 1 0 1 1 1 1 NADH(P)-binding 3Beta_HSD PF01073.14 gi|407465567|ref|YP_006776449.1| - 1e-06 27.6 0.1 2.5e-06 26.3 0.1 1.8 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family adh_short PF00106.20 gi|407465567|ref|YP_006776449.1| - 0.0082 16.0 0.1 0.39 10.6 0.1 2.8 2 1 0 2 2 2 1 short chain dehydrogenase DapB_N PF01113.15 gi|407465567|ref|YP_006776449.1| - 0.019 14.8 0.0 1.1 9.1 0.0 2.3 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus Epimerase PF01370.16 gi|407465568|ref|YP_006776450.1| - 2.6e-62 210.3 0.0 3.1e-62 210.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|407465568|ref|YP_006776450.1| - 3.5e-21 75.3 0.0 4.6e-21 74.9 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.14 gi|407465568|ref|YP_006776450.1| - 8e-21 73.9 0.0 1e-20 73.6 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|407465568|ref|YP_006776450.1| - 2.7e-16 59.2 0.1 2.8e-13 49.3 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.10 gi|407465568|ref|YP_006776450.1| - 1.7e-13 50.1 0.0 2.5e-12 46.3 0.0 2.2 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein Saccharop_dh PF03435.13 gi|407465568|ref|YP_006776450.1| - 5.8e-05 22.2 0.1 0.0001 21.4 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NmrA PF05368.8 gi|407465568|ref|YP_006776450.1| - 8.7e-05 21.8 0.0 0.00019 20.7 0.0 1.5 2 0 0 2 2 2 1 NmrA-like family NAD_binding_10 PF13460.1 gi|407465568|ref|YP_006776450.1| - 0.0001 22.4 0.0 0.00013 22.0 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding dTDP_sugar_isom PF00908.12 gi|407465569|ref|YP_006776451.1| - 5e-71 237.6 0.0 5.7e-71 237.4 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase Epimerase_2 PF02350.14 gi|407465570|ref|YP_006776452.1| - 7.3e-114 380.1 0.0 9e-114 379.8 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.7 gi|407465570|ref|YP_006776452.1| - 0.00019 20.4 0.0 0.00028 19.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.1 gi|407465570|ref|YP_006776452.1| - 0.00061 19.6 2.3 0.0017 18.2 0.0 2.4 3 0 0 3 3 3 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|407465570|ref|YP_006776452.1| - 0.12 12.1 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glycos_transf_2 PF00535.21 gi|407465571|ref|YP_006776453.1| - 2.3e-29 102.2 0.8 2.3e-29 102.2 0.6 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|407465571|ref|YP_006776453.1| - 9.3e-26 91.0 0.0 1.3e-25 90.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|407465571|ref|YP_006776453.1| - 8.3e-10 38.6 0.1 1.3e-09 38.0 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_5 PF13712.1 gi|407465571|ref|YP_006776453.1| - 2.4e-09 36.7 0.5 1.8e-06 27.3 0.1 2.2 1 1 1 2 2 2 2 Glycosyltransferase like family Glyco_tranf_2_2 PF10111.4 gi|407465571|ref|YP_006776453.1| - 1.9e-07 30.4 0.5 1.2e-06 27.8 0.1 2.0 1 1 1 2 2 2 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|407465571|ref|YP_006776453.1| - 0.0017 17.6 0.0 0.0026 17.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.1 gi|407465571|ref|YP_006776453.1| - 0.0047 17.2 0.0 0.01 16.1 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 GlcNAc PF11397.3 gi|407465571|ref|YP_006776453.1| - 0.092 11.8 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase (GlcNAc) Glyco_trans_1_4 PF13692.1 gi|407465572|ref|YP_006776454.1| - 5.5e-24 84.8 0.0 9.7e-24 84.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|407465572|ref|YP_006776454.1| - 6.5e-10 38.6 0.1 5.3e-09 35.7 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|407465572|ref|YP_006776454.1| - 0.00076 19.6 0.0 0.0023 18.1 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF3892 PF13031.1 gi|407465573|ref|YP_006776455.1| - 0.0012 19.2 0.0 0.0017 18.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3892) DUF2338 PF10100.4 gi|407465576|ref|YP_006776458.1| - 0.0031 15.9 0.8 0.0044 15.4 0.6 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2338) ERp29 PF07749.7 gi|407465579|ref|YP_006776461.1| - 0.00068 20.2 0.9 0.49 11.0 0.1 2.2 2 0 0 2 2 2 2 Endoplasmic reticulum protein ERp29, C-terminal domain ALIX_LYPXL_bnd PF13949.1 gi|407465579|ref|YP_006776461.1| - 0.0025 16.8 4.9 0.0038 16.2 3.2 1.5 1 1 0 1 1 1 1 ALIX V-shaped domain binding to HIV CDC37_C PF08564.5 gi|407465579|ref|YP_006776461.1| - 0.0063 16.3 1.7 0.24 11.2 0.0 2.8 1 1 1 2 2 2 1 Cdc37 C terminal domain YkyA PF10368.4 gi|407465579|ref|YP_006776461.1| - 0.019 14.2 1.9 0.64 9.3 0.2 2.2 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein DDE_Tnp_ISL3 PF01610.12 gi|407465579|ref|YP_006776461.1| - 0.024 14.2 4.8 0.65 9.5 3.3 2.3 1 1 0 1 1 1 0 Transposase Moulting_cycle PF04870.11 gi|407465579|ref|YP_006776461.1| - 0.027 13.5 5.5 0.073 12.1 0.7 2.0 1 1 1 2 2 2 0 Moulting cycle Phasin PF05597.6 gi|407465579|ref|YP_006776461.1| - 0.034 13.9 1.4 0.078 12.7 0.3 1.8 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) GrpE PF01025.14 gi|407465579|ref|YP_006776461.1| - 0.037 13.5 1.5 0.05 13.1 1.1 1.1 1 0 0 1 1 1 0 GrpE DUF4381 PF14316.1 gi|407465579|ref|YP_006776461.1| - 0.074 13.1 5.0 0.18 11.9 2.5 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4381) CMAS PF02353.15 gi|407465579|ref|YP_006776461.1| - 0.086 11.9 6.0 0.74 8.8 0.9 2.3 1 1 1 2 2 2 0 Mycolic acid cyclopropane synthetase Mating_N PF12731.2 gi|407465579|ref|YP_006776461.1| - 0.34 10.8 4.1 1.2 9.0 0.8 2.8 1 1 1 2 2 2 0 Mating-type protein beta 1 DUF2094 PF09867.4 gi|407465579|ref|YP_006776461.1| - 0.36 10.7 3.9 6.4 6.6 0.2 2.4 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2094) DASH_Dad2 PF08654.5 gi|407465579|ref|YP_006776461.1| - 0.8 9.7 5.6 1.9 8.5 0.7 2.7 1 1 1 2 2 2 0 DASH complex subunit Dad2 Toxin_45 PF15524.1 gi|407465579|ref|YP_006776461.1| - 1.3 9.1 5.0 0.88 9.7 0.7 2.5 1 1 2 3 3 3 0 Putative toxin 45 PBD PF00786.23 gi|407465579|ref|YP_006776461.1| - 1.7 9.1 9.7 4.8 7.6 0.2 3.6 1 1 2 3 3 3 0 P21-Rho-binding domain MbeD_MobD PF04899.7 gi|407465579|ref|YP_006776461.1| - 1.7 8.5 10.3 0.059 13.2 1.1 2.6 2 1 0 2 2 2 0 MbeD/MobD like Spore_III_AB PF09548.5 gi|407465579|ref|YP_006776461.1| - 5.5 6.7 6.4 5.1 6.8 0.4 2.2 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) 4HBT PF03061.17 gi|407465580|ref|YP_006776462.1| - 3.6e-16 59.0 0.1 4.9e-16 58.6 0.1 1.2 1 0 0 1 1 1 1 Thioesterase superfamily MaoC_dehydratas PF01575.14 gi|407465580|ref|YP_006776462.1| - 0.0011 18.3 0.1 0.0017 17.7 0.1 1.3 1 0 0 1 1 1 1 MaoC like domain UbiD PF01977.11 gi|407465581|ref|YP_006776463.1| - 3.1e-104 348.6 0.0 3.5e-104 348.4 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C1_1 PF00130.17 gi|407465583|ref|YP_006776465.1| - 0.4 10.4 10.6 1.1 9.0 0.6 2.5 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Cys_rich_CPCC PF14206.1 gi|407465583|ref|YP_006776465.1| - 5.1 6.7 8.4 0.33 10.5 1.5 2.4 2 1 0 2 2 2 0 Cysteine-rich CPCC DUF460 PF04312.8 gi|407465584|ref|YP_006776466.1| - 0.02 14.4 0.0 0.041 13.3 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF460) DivIVA PF05103.8 gi|407465585|ref|YP_006776467.1| - 0.0025 17.8 4.2 0.0032 17.5 2.9 1.1 1 0 0 1 1 1 1 DivIVA protein Tropomyosin PF00261.15 gi|407465585|ref|YP_006776467.1| - 0.0051 15.9 5.3 0.0064 15.6 3.7 1.1 1 0 0 1 1 1 1 Tropomyosin DUF972 PF06156.8 gi|407465585|ref|YP_006776467.1| - 0.0077 16.5 1.6 0.01 16.1 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF972) Peptidase_C12 PF01088.16 gi|407465585|ref|YP_006776467.1| - 0.037 13.2 0.6 0.043 13.0 0.4 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase, family 1 Cep57_CLD_2 PF14197.1 gi|407465585|ref|YP_006776467.1| - 0.043 13.7 0.8 0.45 10.5 0.3 2.4 1 1 0 2 2 2 0 Centrosome localisation domain of PPC89 CsoSCA PF08936.5 gi|407465585|ref|YP_006776467.1| - 0.059 11.7 0.7 0.069 11.5 0.5 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase GSIII_N PF12437.3 gi|407465585|ref|YP_006776467.1| - 0.072 12.4 0.4 0.097 12.0 0.3 1.2 1 0 0 1 1 1 0 Glutamine synthetase type III N terminal Apolipoprotein PF01442.13 gi|407465585|ref|YP_006776467.1| - 0.078 12.4 1.4 0.13 11.8 1.0 1.3 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Spc24 PF08286.6 gi|407465585|ref|YP_006776467.1| - 0.15 11.7 3.7 0.44 10.2 2.6 1.8 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 NPV_P10 PF05531.7 gi|407465585|ref|YP_006776467.1| - 0.18 12.1 2.3 0.85 9.9 1.6 2.2 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein CENP-F_leu_zip PF10473.4 gi|407465585|ref|YP_006776467.1| - 0.21 11.4 6.8 1.5 8.6 0.2 2.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1664 PF07889.7 gi|407465585|ref|YP_006776467.1| - 0.24 11.1 4.1 0.42 10.4 2.5 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Reo_sigmaC PF04582.7 gi|407465585|ref|YP_006776467.1| - 0.27 10.3 3.5 0.34 10.0 2.4 1.1 1 0 0 1 1 1 0 Reovirus sigma C capsid protein DUF883 PF05957.8 gi|407465585|ref|YP_006776467.1| - 0.33 11.3 5.0 3 8.2 1.1 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF1059 PF06348.6 gi|407465586|ref|YP_006776468.1| - 2.6e-05 23.9 0.0 3.4e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) DUF4451 PF14616.1 gi|407465586|ref|YP_006776468.1| - 0.096 12.4 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4451) NAC PF01849.13 gi|407465587|ref|YP_006776469.1| - 1.4e-15 56.5 1.0 2.5e-15 55.7 0.7 1.4 1 0 0 1 1 1 1 NAC domain UBA PF00627.26 gi|407465587|ref|YP_006776469.1| - 1.6e-06 27.7 0.2 1.6e-06 27.7 0.2 2.0 2 0 0 2 2 2 1 UBA/TS-N domain UBA_4 PF14555.1 gi|407465587|ref|YP_006776469.1| - 0.0059 16.1 0.1 0.0084 15.6 0.1 1.3 1 0 0 1 1 1 1 UBA-like domain ATP-synt_DE PF00401.15 gi|407465587|ref|YP_006776469.1| - 0.05 13.4 1.9 0.087 12.7 1.4 1.4 1 0 0 1 1 1 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FdtA PF05523.6 gi|407465587|ref|YP_006776469.1| - 0.081 12.4 0.2 0.12 11.8 0.1 1.2 1 0 0 1 1 1 0 WxcM-like, C-terminal Gpi16 PF04113.9 gi|407465587|ref|YP_006776469.1| - 0.087 10.8 0.3 0.1 10.6 0.2 1.0 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component Cytidylate_kin2 PF13189.1 gi|407465587|ref|YP_006776469.1| - 0.17 11.7 1.2 0.59 10.0 0.1 2.0 2 0 0 2 2 2 0 Cytidylate kinase-like family NTR2 PF15458.1 gi|407465587|ref|YP_006776469.1| - 0.42 9.8 5.3 0.52 9.4 3.7 1.0 1 0 0 1 1 1 0 Nineteen complex-related protein 2 TGT_C2 PF14810.1 gi|407465588|ref|YP_006776470.1| - 3.3e-10 39.6 0.1 5.6e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.15 gi|407465588|ref|YP_006776470.1| - 2.7e-09 36.5 0.2 6.2e-09 35.4 0.1 1.6 2 0 0 2 2 2 1 PUA domain PhoU PF01895.14 gi|407465589|ref|YP_006776471.1| - 2.4e-29 101.6 13.6 1e-19 70.7 1.2 2.5 2 0 0 2 2 2 2 PhoU domain Antitoxin-MazE PF04014.13 gi|407465589|ref|YP_006776471.1| - 7.3e-08 31.9 0.0 2.4e-07 30.3 0.0 1.9 1 0 0 1 1 1 1 Antidote-toxin recognition MazE YbjQ_1 PF01906.12 gi|407465589|ref|YP_006776471.1| - 0.081 13.3 0.8 0.25 11.7 0.1 2.2 2 0 0 2 2 2 0 Putative heavy-metal-binding MMR_HSR1 PF01926.18 gi|407465590|ref|YP_006776472.1| - 1.3e-16 60.5 0.3 4.2e-16 58.9 0.2 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|407465590|ref|YP_006776472.1| - 2.3e-11 43.2 0.7 4.1e-11 42.3 0.5 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP-bdg_N PF13167.1 gi|407465590|ref|YP_006776472.1| - 2.5e-09 37.1 1.7 5e-09 36.1 0.1 2.4 3 0 0 3 3 3 1 GTP-binding GTPase N-terminal GTP_EFTU PF00009.22 gi|407465590|ref|YP_006776472.1| - 8.5e-07 28.5 4.0 3.4e-05 23.3 2.7 2.3 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Miro PF08477.8 gi|407465590|ref|YP_006776472.1| - 7.5e-05 23.2 0.5 0.00061 20.2 0.2 2.6 2 1 1 3 3 3 1 Miro-like protein Arf PF00025.16 gi|407465590|ref|YP_006776472.1| - 7.9e-05 21.9 2.3 0.00017 20.8 1.5 1.6 1 1 0 1 1 1 1 ADP-ribosylation factor family PduV-EutP PF10662.4 gi|407465590|ref|YP_006776472.1| - 0.0007 19.0 5.9 0.012 15.1 4.1 2.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation DUF258 PF03193.11 gi|407465590|ref|YP_006776472.1| - 0.0011 18.1 1.7 0.003 16.7 0.3 2.2 1 1 0 2 2 2 1 Protein of unknown function, DUF258 Trans_reg_C PF00486.23 gi|407465590|ref|YP_006776472.1| - 0.0034 17.2 0.5 0.22 11.4 0.0 2.8 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal DUF1938 PF09153.5 gi|407465590|ref|YP_006776472.1| - 0.026 14.3 0.5 1.6 8.6 0.1 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1938) cobW PF02492.14 gi|407465590|ref|YP_006776472.1| - 0.28 10.5 5.0 4.4 6.7 0.2 2.5 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.18 gi|407465590|ref|YP_006776472.1| - 0.77 9.5 5.6 13 5.5 3.9 3.0 1 1 0 1 1 1 0 Dynamin family Trm56 PF01994.11 gi|407465591|ref|YP_006776473.1| - 1.3e-50 170.1 0.4 2.2e-50 169.4 0.3 1.3 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SpoU_methylase PF00588.14 gi|407465591|ref|YP_006776473.1| - 6.6e-06 26.0 0.0 9.6e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family CsgE PF10627.4 gi|407465591|ref|YP_006776473.1| - 0.012 15.4 0.1 2.9 7.7 0.0 2.8 2 1 1 3 3 3 0 Curli assembly protein CsgE SPOUT_MTase_2 PF14419.1 gi|407465591|ref|YP_006776473.1| - 0.059 12.5 0.0 0.085 12.0 0.0 1.3 1 0 0 1 1 1 0 AF2226-like SPOUT RNA Methylase fused to THUMP Methyltrn_RNA_4 PF09936.4 gi|407465591|ref|YP_006776473.1| - 0.13 11.7 0.5 1.5 8.3 0.0 2.2 1 1 1 2 2 2 0 SAM-dependent RNA methyltransferase TFIIE_alpha PF02002.12 gi|407465592|ref|YP_006776474.1| - 2.8e-18 65.3 1.3 2.8e-18 65.3 0.9 1.4 2 0 0 2 2 2 1 TFIIE alpha subunit Sushi_2 PF09014.5 gi|407465592|ref|YP_006776474.1| - 0.029 14.1 0.7 0.047 13.4 0.5 1.4 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain TrmB PF01978.14 gi|407465592|ref|YP_006776474.1| - 0.032 13.9 0.0 0.074 12.7 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Sigma70_r3 PF04539.11 gi|407465592|ref|YP_006776474.1| - 0.14 12.0 1.2 0.32 10.9 0.0 2.0 2 0 0 2 2 2 0 Sigma-70 region 3 zf-C3HC PF07967.8 gi|407465592|ref|YP_006776474.1| - 0.35 10.6 2.9 0.32 10.7 0.8 1.8 1 1 1 2 2 2 0 C3HC zinc finger-like Phe_tRNA-synt_N PF02912.13 gi|407465592|ref|YP_006776474.1| - 2.1 8.1 5.6 12 5.6 0.5 3.0 3 0 0 3 3 3 0 Aminoacyl tRNA synthetase class II, N-terminal domain DUF2346 PF09803.4 gi|407465592|ref|YP_006776474.1| - 2.8 7.8 5.7 0.26 11.1 0.6 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2346) Aldedh PF00171.17 gi|407465593|ref|YP_006776475.1| - 2.8e-145 484.1 0.1 3.2e-145 484.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Hemerythrin PF01814.18 gi|407465595|ref|YP_006776477.1| - 3.2e-11 43.5 0.5 8.7e-11 42.1 0.1 1.9 2 1 0 2 2 2 1 Hemerythrin HHE cation binding domain Methyltransf_4 PF02390.12 gi|407465595|ref|YP_006776477.1| - 0.01 14.9 2.8 0.012 14.6 1.2 1.5 2 0 0 2 2 2 0 Putative methyltransferase DUF3347 PF11827.3 gi|407465595|ref|YP_006776477.1| - 0.031 14.2 1.6 0.04 13.9 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3347) HrpE PF06188.7 gi|407465595|ref|YP_006776477.1| - 0.053 13.2 0.3 0.09 12.5 0.2 1.3 1 0 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E IZUMO PF15005.1 gi|407465595|ref|YP_006776477.1| - 0.22 11.5 1.9 0.29 11.1 0.6 1.7 2 0 0 2 2 2 0 Izumo sperm-egg fusion LOH1CR12 PF10158.4 gi|407465595|ref|YP_006776477.1| - 0.22 11.3 2.6 5.9 6.6 0.1 2.4 2 1 0 2 2 2 0 Tumour suppressor protein 4HB_MCP_1 PF12729.2 gi|407465595|ref|YP_006776477.1| - 0.45 9.8 6.1 0.28 10.4 2.8 1.7 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction SWIB PF02201.13 gi|407465596|ref|YP_006776478.1| - 0.0043 16.7 0.0 0.0068 16.0 0.0 1.3 1 0 0 1 1 1 1 SWIB/MDM2 domain RibD_C PF01872.12 gi|407465597|ref|YP_006776479.1| - 4.2e-51 173.3 0.1 4.7e-51 173.2 0.1 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Sep15_SelM PF08806.6 gi|407465597|ref|YP_006776479.1| - 0.0082 15.8 0.0 0.027 14.2 0.0 1.9 1 1 0 1 1 1 1 Sep15/SelM redox domain Amidohydro_1 PF01979.15 gi|407465598|ref|YP_006776480.1| - 4.5e-27 95.5 0.1 1.6e-26 93.7 0.1 1.8 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|407465598|ref|YP_006776480.1| - 1.2e-10 41.0 0.2 6.1e-10 38.7 0.0 2.3 3 0 0 3 3 3 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|407465598|ref|YP_006776480.1| - 4e-08 33.6 0.0 0.0099 15.9 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase Amidohydro_3 PF07969.6 gi|407465598|ref|YP_006776480.1| - 1.2e-05 24.7 0.1 0.008 15.4 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase family GGDN PF05165.7 gi|407465599|ref|YP_006776481.1| - 5.8e-51 172.9 0.0 7.5e-51 172.5 0.0 1.0 1 0 0 1 1 1 1 GGDN family Guanylate_cyc PF00211.15 gi|407465599|ref|YP_006776481.1| - 0.0019 17.5 0.1 0.0038 16.5 0.1 1.6 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain NOG1 PF06858.9 gi|407465599|ref|YP_006776481.1| - 0.047 13.5 1.6 0.061 13.2 0.1 2.0 3 0 0 3 3 3 0 Nucleolar GTP-binding protein 1 (NOG1) DinI PF06183.8 gi|407465599|ref|YP_006776481.1| - 0.057 13.4 0.2 0.15 12.0 0.1 1.8 2 0 0 2 2 2 0 DinI-like family YcxB PF14317.1 gi|407465599|ref|YP_006776481.1| - 0.11 11.7 0.4 4.6 6.5 0.0 2.3 2 0 0 2 2 2 0 YcxB-like protein ARL2_Bind_BART PF11527.3 gi|407465599|ref|YP_006776481.1| - 0.2 11.4 2.5 0.31 10.8 0.3 2.2 2 1 0 2 2 2 0 The ARF-like 2 binding protein BART DMRL_synthase PF00885.14 gi|407465600|ref|YP_006776482.1| - 2.3e-33 114.8 0.3 2.6e-33 114.7 0.2 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DUF3356 PF11836.3 gi|407465600|ref|YP_006776482.1| - 0.023 14.4 0.1 0.53 10.1 0.1 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3356) DHBP_synthase PF00926.14 gi|407465601|ref|YP_006776483.1| - 5.7e-68 227.9 0.1 6.4e-68 227.7 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PAF-AH_p_II PF03403.8 gi|407465601|ref|YP_006776483.1| - 0.024 12.9 0.0 0.032 12.5 0.0 1.3 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II Lum_binding PF00677.12 gi|407465602|ref|YP_006776484.1| - 6e-47 157.4 12.1 2.3e-27 94.6 0.7 2.0 2 0 0 2 2 2 2 Lumazine binding domain TPR_11 PF13414.1 gi|407465603|ref|YP_006776485.1| - 4.3e-25 87.1 14.4 5.1e-12 45.2 0.1 3.5 1 1 4 5 5 5 4 TPR repeat TPR_1 PF00515.23 gi|407465603|ref|YP_006776485.1| - 7.4e-23 79.1 12.6 1.8e-06 27.2 0.0 5.0 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407465603|ref|YP_006776485.1| - 9.4e-18 63.9 10.9 9.1e-07 28.7 0.3 3.3 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407465603|ref|YP_006776485.1| - 2e-16 58.5 3.5 0.0044 16.8 0.0 5.1 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407465603|ref|YP_006776485.1| - 1.1e-11 43.9 5.6 0.0012 18.8 0.0 4.8 5 1 0 5 5 4 2 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407465603|ref|YP_006776485.1| - 1.6e-10 41.3 0.0 4.6e-06 27.1 0.0 3.0 1 1 1 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|407465603|ref|YP_006776485.1| - 2.2e-10 40.7 6.8 0.0004 20.6 0.1 3.3 1 1 4 5 5 5 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407465603|ref|YP_006776485.1| - 2.4e-10 40.1 0.0 0.067 13.8 0.0 5.6 2 1 4 6 6 6 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|407465603|ref|YP_006776485.1| - 8e-10 37.7 1.0 0.11 12.4 0.0 5.3 5 0 0 5 5 5 2 Tetratricopeptide repeat Apc3 PF12895.2 gi|407465603|ref|YP_006776485.1| - 1.5e-09 37.8 6.5 2.2e-05 24.5 0.1 3.2 1 1 4 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.1 gi|407465603|ref|YP_006776485.1| - 1.2e-07 31.0 19.9 0.0098 15.6 0.2 6.2 3 2 4 7 7 7 2 Tetratricopeptide repeat TPR_9 PF13371.1 gi|407465603|ref|YP_006776485.1| - 2.5e-06 27.2 0.0 0.0017 18.1 0.0 3.4 1 1 3 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.1 gi|407465603|ref|YP_006776485.1| - 5.5e-06 26.1 0.2 0.38 10.7 0.1 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat NARP1 PF12569.3 gi|407465603|ref|YP_006776485.1| - 0.00019 20.3 2.1 0.00029 19.7 0.5 1.9 1 1 1 2 2 2 1 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.1 gi|407465603|ref|YP_006776485.1| - 0.00024 20.9 8.4 6.4 6.7 0.0 5.0 2 2 3 5 5 5 1 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.1 gi|407465603|ref|YP_006776485.1| - 0.00088 19.5 2.9 7 7.3 0.0 5.0 6 0 0 6 6 6 0 Tetratricopeptide repeat PPTA PF01239.17 gi|407465603|ref|YP_006776485.1| - 0.0028 16.9 0.8 0.36 10.2 0.0 2.8 2 0 0 2 2 2 1 Protein prenyltransferase alpha subunit repeat Coatomer_E PF04733.9 gi|407465603|ref|YP_006776485.1| - 0.0035 16.5 3.5 0.54 9.3 0.0 2.2 1 1 1 2 2 2 2 Coatomer epsilon subunit DUF3856 PF12968.2 gi|407465603|ref|YP_006776485.1| - 0.007 16.1 0.0 0.19 11.5 0.0 3.1 2 1 2 4 4 4 1 Domain of Unknown Function (DUF3856) TPR_15 PF13429.1 gi|407465603|ref|YP_006776485.1| - 0.03 13.4 0.5 0.07 12.1 0.2 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat Cas_Cas02710 PF09670.5 gi|407465603|ref|YP_006776485.1| - 0.039 12.5 1.0 0.064 11.8 0.7 1.5 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) Wyosine_form PF08608.7 gi|407465603|ref|YP_006776485.1| - 0.067 13.3 0.0 9.6 6.4 0.0 2.6 2 0 0 2 2 2 0 Wyosine base formation MIT PF04212.13 gi|407465603|ref|YP_006776485.1| - 0.27 11.1 3.1 1.4 8.8 0.1 2.9 2 1 1 3 3 3 0 MIT (microtubule interacting and transport) domain Response_reg PF00072.19 gi|407465604|ref|YP_006776486.1| - 2e-17 63.2 0.2 2.5e-17 62.8 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain DUF2608 PF11019.3 gi|407465604|ref|YP_006776486.1| - 0.00062 18.8 0.1 0.0024 16.9 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2608) DUF356 PF04009.7 gi|407465604|ref|YP_006776486.1| - 0.0051 16.8 0.2 0.01 15.9 0.1 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF356) DUF43 PF01861.11 gi|407465604|ref|YP_006776486.1| - 0.05 12.5 0.2 0.06 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF43 TrkA_N PF02254.13 gi|407465604|ref|YP_006776486.1| - 0.18 11.7 0.5 1.2 9.1 0.4 2.6 1 1 0 1 1 1 0 TrkA-N domain TrmB PF01978.14 gi|407465605|ref|YP_006776487.1| - 0.0048 16.5 0.1 0.01 15.5 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HMA PF00403.21 gi|407465605|ref|YP_006776487.1| - 0.36 11.0 0.1 0.36 11.0 0.1 2.8 3 1 0 3 3 3 0 Heavy-metal-associated domain ADH_zinc_N PF00107.21 gi|407465606|ref|YP_006776488.1| - 1.8e-28 98.6 0.0 3.5e-28 97.7 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.7 gi|407465606|ref|YP_006776488.1| - 1.7e-23 82.4 0.2 2.9e-23 81.7 0.2 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.1 gi|407465606|ref|YP_006776488.1| - 7.5e-15 55.9 0.1 1.4e-14 55.0 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ACP_syn_III_C PF08541.5 gi|407465606|ref|YP_006776488.1| - 0.33 10.9 2.2 0.52 10.3 0.1 2.4 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal dsDNA_bind PF01984.15 gi|407465607|ref|YP_006776489.1| - 3.3e-25 88.1 1.0 3.8e-25 87.9 0.7 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain Ribosomal_S19e PF01090.14 gi|407465608|ref|YP_006776490.1| - 7.5e-49 164.7 0.0 8.5e-49 164.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Cupredoxin_1 PF13473.1 gi|407465609|ref|YP_006776491.1| - 2.2e-10 40.3 0.5 2.6e-10 40.0 0.3 1.3 1 1 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|407465609|ref|YP_006776491.1| - 0.026 14.7 0.4 0.083 13.1 0.3 1.8 1 1 0 1 1 1 0 Copper binding proteins, plastocyanin/azurin family Cu-oxidase_3 PF07732.10 gi|407465609|ref|YP_006776491.1| - 0.03 14.0 0.5 0.06 13.0 0.3 1.5 1 1 0 1 1 1 0 Multicopper oxidase Prok-RING_1 PF14446.1 gi|407465610|ref|YP_006776492.1| - 0.0001 21.9 1.5 0.18 11.5 0.1 2.3 2 0 0 2 2 2 2 Prokaryotic RING finger family 1 zf-C2H2 PF00096.21 gi|407465610|ref|YP_006776492.1| - 0.0013 18.9 16.0 0.15 12.4 3.0 2.6 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_6 PF13912.1 gi|407465610|ref|YP_006776492.1| - 0.0044 16.8 7.7 0.2 11.6 0.6 3.4 3 0 0 3 3 3 1 C2H2-type zinc finger zf-C2H2_4 PF13894.1 gi|407465610|ref|YP_006776492.1| - 0.005 17.0 13.5 0.38 11.1 2.5 2.5 2 0 0 2 2 2 2 C2H2-type zinc finger DUF2321 PF10083.4 gi|407465610|ref|YP_006776492.1| - 0.0059 16.1 0.2 0.0066 15.9 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2321) zf-RING_3 PF14369.1 gi|407465610|ref|YP_006776492.1| - 0.017 15.1 1.9 0.32 11.0 0.0 2.3 2 0 0 2 2 2 0 zinc-finger C1_1 PF00130.17 gi|407465610|ref|YP_006776492.1| - 0.018 14.7 4.2 0.027 14.1 2.9 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Rpr2 PF04032.11 gi|407465610|ref|YP_006776492.1| - 0.023 14.5 3.9 0.023 14.5 2.7 1.6 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain XPA_N PF01286.13 gi|407465610|ref|YP_006776492.1| - 0.026 14.1 4.0 1.1 8.9 0.3 2.3 2 0 0 2 2 2 0 XPA protein N-terminal zf-H2C2_2 PF13465.1 gi|407465610|ref|YP_006776492.1| - 0.028 14.7 3.0 0.028 14.7 2.1 3.3 3 1 0 3 3 2 0 Zinc-finger double domain DZR PF12773.2 gi|407465610|ref|YP_006776492.1| - 0.032 14.0 2.7 0.056 13.2 1.9 1.5 1 1 0 1 1 1 0 Double zinc ribbon RNA_POL_M_15KD PF02150.11 gi|407465610|ref|YP_006776492.1| - 0.056 13.1 0.5 3.4 7.4 0.1 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zinc_ribbon_5 PF13719.1 gi|407465610|ref|YP_006776492.1| - 0.07 12.7 4.3 0.36 10.4 0.6 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_S27e PF01667.12 gi|407465610|ref|YP_006776492.1| - 0.11 12.0 3.7 0.24 10.9 2.5 1.7 1 1 0 1 1 1 0 Ribosomal protein S27 ADK_lid PF05191.9 gi|407465610|ref|YP_006776492.1| - 0.15 11.7 1.7 0.82 9.3 0.1 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-FCS PF06467.9 gi|407465610|ref|YP_006776492.1| - 0.18 11.5 6.3 2.6 7.7 4.1 2.3 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif YhfH PF14149.1 gi|407465610|ref|YP_006776492.1| - 0.2 11.4 4.2 0.24 11.2 0.2 2.3 2 0 0 2 2 2 0 YhfH-like protein zf-HYPF PF07503.7 gi|407465610|ref|YP_006776492.1| - 0.2 11.0 3.4 1.9 7.9 0.4 2.5 2 0 0 2 2 2 0 HypF finger LIM PF00412.17 gi|407465610|ref|YP_006776492.1| - 0.21 11.6 7.4 0.32 11.0 5.1 1.3 1 0 0 1 1 1 0 LIM domain zf-C2H2_2 PF12756.2 gi|407465610|ref|YP_006776492.1| - 0.22 11.6 19.9 0.33 11.0 5.6 2.2 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) Tnp_zf-ribbon_2 PF13842.1 gi|407465610|ref|YP_006776492.1| - 0.25 11.7 4.2 0.67 10.4 2.9 1.8 1 1 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon TFIIS_C PF01096.13 gi|407465610|ref|YP_006776492.1| - 0.27 10.9 3.8 0.94 9.1 0.2 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Zn_ribbon_recom PF13408.1 gi|407465610|ref|YP_006776492.1| - 0.28 11.4 4.9 1.8 8.9 1.3 2.5 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-CSL PF05207.8 gi|407465610|ref|YP_006776492.1| - 0.29 10.6 3.0 0.5 9.9 1.5 1.6 1 1 1 2 2 2 0 CSL zinc finger Zn-ribbon_8 PF09723.5 gi|407465610|ref|YP_006776492.1| - 0.31 11.0 3.1 2.9 7.8 0.2 2.4 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_4 PF13717.1 gi|407465610|ref|YP_006776492.1| - 0.32 10.7 5.8 5.2 6.8 4.0 2.2 1 1 0 1 1 1 0 zinc-ribbon domain FYVE PF01363.16 gi|407465610|ref|YP_006776492.1| - 0.41 10.5 12.2 9.6 6.1 8.5 2.2 1 1 0 1 1 1 0 FYVE zinc finger DUF629 PF04780.7 gi|407465610|ref|YP_006776492.1| - 0.53 8.7 15.6 0.63 8.4 2.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF629) zf-trcl PF13451.1 gi|407465610|ref|YP_006776492.1| - 0.57 9.8 3.8 0.97 9.1 0.2 2.3 2 0 0 2 2 2 0 Probable zinc-binding domain FYDLN_acid PF09538.5 gi|407465610|ref|YP_006776492.1| - 0.57 10.7 7.8 4.3 7.9 5.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) CpXC PF14353.1 gi|407465610|ref|YP_006776492.1| - 0.59 10.1 6.8 2.8 7.9 4.7 2.2 1 1 0 1 1 1 0 CpXC protein Mut7-C PF01927.11 gi|407465610|ref|YP_006776492.1| - 0.77 9.7 4.8 0.47 10.4 2.0 1.6 1 1 0 1 1 1 0 Mut7-C RNAse domain FlhC PF05280.6 gi|407465610|ref|YP_006776492.1| - 0.89 9.0 3.7 1.4 8.3 0.3 2.0 1 1 1 2 2 2 0 Flagellar transcriptional activator (FlhC) DUF3552 PF12072.3 gi|407465610|ref|YP_006776492.1| - 0.92 8.6 5.5 1.1 8.4 3.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) Elf1 PF05129.8 gi|407465610|ref|YP_006776492.1| - 1.1 9.0 8.7 0.27 10.9 3.6 1.8 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like Ribosomal_L31 PF01197.13 gi|407465610|ref|YP_006776492.1| - 1.2 9.2 9.7 5.4 7.0 5.1 2.6 1 1 1 2 2 2 0 Ribosomal protein L31 DNA_RNApol_7kD PF03604.8 gi|407465610|ref|YP_006776492.1| - 1.6 8.2 5.4 2.9 7.4 0.8 2.3 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit IBR PF01485.16 gi|407465610|ref|YP_006776492.1| - 2.2 8.2 6.8 19 5.2 4.7 2.2 1 1 0 1 1 1 0 IBR domain C1_4 PF07975.7 gi|407465610|ref|YP_006776492.1| - 2.8 8.0 9.2 8.5 6.4 0.7 2.2 1 1 1 2 2 2 0 TFIIH C1-like domain zinc_ribbon_2 PF13240.1 gi|407465610|ref|YP_006776492.1| - 3.4 7.2 6.4 1.5 8.3 0.3 2.4 3 0 0 3 3 2 0 zinc-ribbon domain Cupredoxin_1 PF13473.1 gi|407465611|ref|YP_006776493.1| - 5.9e-09 35.7 0.0 8.6e-09 35.2 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|407465611|ref|YP_006776493.1| - 0.0049 17.0 0.2 0.007 16.5 0.1 1.6 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family DUF106 PF01956.11 gi|407465612|ref|YP_006776494.1| - 1.3e-12 47.5 15.8 6.3e-12 45.3 11.0 1.8 1 1 0 1 1 1 1 Integral membrane protein DUF106 DUF1059 PF06348.6 gi|407465613|ref|YP_006776495.1| - 1.4e-07 31.1 0.2 1.5e-07 31.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) zf-IS66 PF13005.2 gi|407465614|ref|YP_006776496.1| - 0.017 15.0 1.0 0.095 12.6 0.1 2.2 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 DUF2072 PF09845.4 gi|407465614|ref|YP_006776496.1| - 0.8 9.6 3.6 1.1 9.1 2.5 1.2 1 0 0 1 1 1 0 Zn-ribbon containing protein (DUF2072) Spt4 PF06093.8 gi|407465614|ref|YP_006776496.1| - 1.9 8.4 5.8 0.64 9.9 2.4 1.4 2 0 0 2 2 2 0 Spt4/RpoE2 zinc finger Zn_ribbon_recom PF13408.1 gi|407465614|ref|YP_006776496.1| - 3.8 7.8 10.3 0.26 11.5 3.0 2.0 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain Ogr_Delta PF04606.7 gi|407465614|ref|YP_006776496.1| - 4 7.1 7.4 0.54 9.9 2.0 1.9 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger HTH_45 PF14947.1 gi|407465616|ref|YP_006776498.1| - 1.3e-07 31.2 1.0 1.7e-07 30.9 0.7 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix MarR PF01047.17 gi|407465616|ref|YP_006776498.1| - 0.00014 21.5 0.1 0.00019 21.0 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|407465616|ref|YP_006776498.1| - 0.0086 16.0 0.0 0.01 15.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF2513 PF10711.4 gi|407465616|ref|YP_006776498.1| - 0.042 13.9 0.1 0.06 13.4 0.1 1.1 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) Dor1 PF04124.7 gi|407465616|ref|YP_006776498.1| - 0.07 11.5 0.0 0.085 11.3 0.0 1.0 1 0 0 1 1 1 0 Dor1-like family HTH_Crp_2 PF13545.1 gi|407465616|ref|YP_006776498.1| - 0.2 11.4 0.1 0.2 11.4 0.0 1.5 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain AsnC_trans_reg PF01037.16 gi|407465617|ref|YP_006776499.1| - 9.4e-22 76.5 0.5 1.1e-09 37.7 0.1 2.1 2 0 0 2 2 2 2 AsnC family GYD PF08734.6 gi|407465617|ref|YP_006776499.1| - 1.7e-06 27.6 0.0 0.022 14.4 0.0 2.2 2 0 0 2 2 2 2 GYD domain DUF2129 PF09902.4 gi|407465617|ref|YP_006776499.1| - 0.0077 15.9 0.1 3.5 7.4 0.0 2.7 3 0 0 3 3 3 2 Uncharacterized protein conserved in bacteria (DUF2129) Pico_P2B PF01552.12 gi|407465617|ref|YP_006776499.1| - 0.028 14.5 1.3 3.3 7.9 0.1 2.3 2 0 0 2 2 2 0 Picornavirus 2B protein DUF1479 PF07350.7 gi|407465617|ref|YP_006776499.1| - 0.086 11.3 0.0 0.18 10.2 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1479) Ribosomal_S13 PF00416.17 gi|407465617|ref|YP_006776499.1| - 0.092 13.1 2.3 0.1 13.0 0.3 1.8 2 0 0 2 2 2 0 Ribosomal protein S13/S18 DUF4202 PF13875.1 gi|407465617|ref|YP_006776499.1| - 0.12 12.0 0.5 0.32 10.6 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4202) ACT_4 PF13291.1 gi|407465617|ref|YP_006776499.1| - 0.15 12.4 0.9 57 4.1 0.0 3.4 3 1 1 4 4 4 0 ACT domain Herpes_BBRF1 PF04793.7 gi|407465617|ref|YP_006776499.1| - 0.17 10.6 1.0 2.7 6.6 0.1 2.1 1 1 0 2 2 2 0 BRRF1-like protein Phospholip_B PF04916.8 gi|407465618|ref|YP_006776500.1| - 0.035 12.2 0.0 0.036 12.2 0.0 1.0 1 0 0 1 1 1 0 Phospholipase B PRD PF00874.15 gi|407465618|ref|YP_006776500.1| - 0.13 12.4 0.1 0.59 10.2 0.0 1.9 2 0 0 2 2 2 0 PRD domain DUF3108 PF11306.3 gi|407465619|ref|YP_006776501.1| - 0.019 14.6 0.1 0.036 13.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3108) C1_1 PF00130.17 gi|407465620|ref|YP_006776502.1| - 3.3 7.5 9.0 0.45 10.2 3.4 1.7 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-FCS PF06467.9 gi|407465620|ref|YP_006776502.1| - 5 6.8 13.0 1 9.0 0.6 3.1 2 1 1 3 3 3 0 MYM-type Zinc finger with FCS sequence motif Rpr2 PF04032.11 gi|407465621|ref|YP_006776503.1| - 5.9e-18 64.5 1.5 6.8e-18 64.3 1.1 1.0 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-Sec23_Sec24 PF04810.10 gi|407465621|ref|YP_006776503.1| - 0.0089 15.5 1.6 1 8.9 0.1 2.2 2 0 0 2 2 2 2 Sec23/Sec24 zinc finger C1_1 PF00130.17 gi|407465621|ref|YP_006776503.1| - 0.04 13.6 0.6 0.071 12.8 0.4 1.4 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PapD-like PF14874.1 gi|407465621|ref|YP_006776503.1| - 0.12 12.2 0.1 0.21 11.5 0.1 1.4 1 1 0 1 1 1 0 Flagellar-associated PapD-like Cript PF10235.4 gi|407465621|ref|YP_006776503.1| - 0.3 11.4 1.8 1.1 9.7 1.3 1.8 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT EMG1 PF03587.9 gi|407465622|ref|YP_006776504.1| - 9.9e-41 139.2 0.1 1.1e-40 139.0 0.1 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase Glyco_hydro_35 PF01301.14 gi|407465623|ref|YP_006776505.1| - 0.0015 17.9 0.1 0.083 12.2 0.0 2.4 2 0 0 2 2 2 1 Glycosyl hydrolases family 35 Glyco_hydro_42 PF02449.10 gi|407465623|ref|YP_006776505.1| - 0.024 13.7 0.0 0.095 11.7 0.0 1.8 2 0 0 2 2 2 0 Beta-galactosidase Peptidase_M32 PF02074.10 gi|407465623|ref|YP_006776505.1| - 0.082 11.5 0.0 0.13 10.8 0.0 1.3 1 0 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase Ribonuc_red_lgC PF02867.10 gi|407465624|ref|YP_006776506.1| - 2.7e-151 504.7 0.0 4.7e-151 503.9 0.0 1.4 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.16 gi|407465624|ref|YP_006776506.1| - 4e-30 103.4 0.0 1.1e-29 102.0 0.0 1.8 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.11 gi|407465624|ref|YP_006776506.1| - 8.1e-23 80.6 0.9 2.3e-22 79.2 0.6 1.9 1 0 0 1 1 1 1 ATP cone domain GlutR_dimer PF00745.15 gi|407465624|ref|YP_006776506.1| - 0.14 12.1 0.1 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain NRDD PF13597.1 gi|407465625|ref|YP_006776507.1| - 2.8e-22 78.5 0.0 1.1e-19 69.9 0.0 2.3 2 0 0 2 2 2 2 Anaerobic ribonucleoside-triphosphate reductase HTH_20 PF12840.2 gi|407465625|ref|YP_006776507.1| - 8.3e-10 38.3 0.0 2.4e-09 36.8 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain ATP-cone PF03477.11 gi|407465625|ref|YP_006776507.1| - 2.3e-07 31.1 3.1 4.2e-07 30.2 0.0 3.0 4 0 0 4 4 4 1 ATP cone domain zf-C3HC4_3 PF13920.1 gi|407465625|ref|YP_006776507.1| - 0.0078 15.8 0.3 0.013 15.1 0.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.1 gi|407465626|ref|YP_006776508.1| - 0.00034 19.7 2.9 0.067 12.4 0.2 2.1 2 0 0 2 2 2 2 zinc-ribbon domain LIM PF00412.17 gi|407465626|ref|YP_006776508.1| - 0.00039 20.4 0.2 0.00045 20.2 0.1 1.1 1 0 0 1 1 1 1 LIM domain zinc_ribbon_2 PF13240.1 gi|407465626|ref|YP_006776508.1| - 0.00057 19.2 3.9 0.051 13.0 0.2 2.2 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.2 gi|407465626|ref|YP_006776508.1| - 0.00075 19.2 1.3 0.0013 18.4 0.9 1.4 1 1 0 1 1 1 1 Double zinc ribbon zf-LITAF-like PF10601.4 gi|407465626|ref|YP_006776508.1| - 0.0011 18.8 1.1 0.059 13.2 0.0 2.2 1 1 1 2 2 2 1 LITAF-like zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|407465626|ref|YP_006776508.1| - 0.0012 18.0 0.7 0.16 11.3 0.1 2.1 2 0 0 2 2 2 1 TFIIB zinc-binding zf-Di19 PF05605.7 gi|407465626|ref|YP_006776508.1| - 0.0042 17.1 1.8 0.074 13.1 0.2 1.7 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-DNA_Pol PF08996.5 gi|407465626|ref|YP_006776508.1| - 0.0044 16.3 0.7 0.0046 16.3 0.5 1.0 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger zinc_ribbon_5 PF13719.1 gi|407465626|ref|YP_006776508.1| - 0.0065 16.0 1.5 0.48 10.0 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain zf-C4_Topoisom PF01396.14 gi|407465626|ref|YP_006776508.1| - 0.0065 15.9 3.6 0.14 11.6 0.2 2.2 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger FANCL_C PF11793.3 gi|407465626|ref|YP_006776508.1| - 0.0067 16.3 1.1 0.023 14.6 0.0 1.9 1 1 1 2 2 2 1 FANCL C-terminal domain Chordopox_RPO7 PF05864.7 gi|407465626|ref|YP_006776508.1| - 0.0068 16.4 0.5 0.05 13.7 0.4 2.1 1 1 0 1 1 1 1 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) zinc_ribbon_4 PF13717.1 gi|407465626|ref|YP_006776508.1| - 0.0071 16.0 1.4 0.57 9.9 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain DUF4428 PF14471.1 gi|407465626|ref|YP_006776508.1| - 0.0084 15.8 2.4 1.5 8.6 0.2 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4428) zf-C3HC4_3 PF13920.1 gi|407465626|ref|YP_006776508.1| - 0.011 15.3 1.2 0.019 14.6 0.8 1.4 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) HypA PF01155.14 gi|407465626|ref|YP_006776508.1| - 0.012 15.3 0.4 0.016 14.8 0.3 1.2 1 1 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Prok-RING_1 PF14446.1 gi|407465626|ref|YP_006776508.1| - 0.013 15.2 0.8 0.96 9.2 0.0 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-IS66 PF13005.2 gi|407465626|ref|YP_006776508.1| - 0.014 15.3 0.6 0.66 9.9 0.0 2.1 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 Zn-ribbon_8 PF09723.5 gi|407465626|ref|YP_006776508.1| - 0.017 15.0 3.3 0.16 11.9 2.3 2.0 1 1 1 2 2 2 0 Zinc ribbon domain zf-C2HC5 PF06221.8 gi|407465626|ref|YP_006776508.1| - 0.025 14.3 2.0 0.5 10.1 1.4 2.0 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type zf-TFIIB PF13453.1 gi|407465626|ref|YP_006776508.1| - 0.026 13.7 0.6 0.14 11.3 0.0 2.0 2 0 0 2 2 2 0 Transcription factor zinc-finger Zn_Tnp_IS1595 PF12760.2 gi|407465626|ref|YP_006776508.1| - 0.026 14.3 1.4 0.43 10.4 0.0 2.0 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-C2H2 PF00096.21 gi|407465626|ref|YP_006776508.1| - 0.027 14.7 2.1 3.1 8.3 0.0 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type DNA_RNApol_7kD PF03604.8 gi|407465626|ref|YP_006776508.1| - 0.04 13.3 1.1 1.3 8.5 0.1 2.2 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit T4_baseplate PF12322.3 gi|407465626|ref|YP_006776508.1| - 0.04 13.1 1.9 1.2 8.2 0.1 2.0 1 1 1 2 2 2 0 T4 bacteriophage base plate protein Rad50_zn_hook PF04423.9 gi|407465626|ref|YP_006776508.1| - 0.053 13.0 1.4 0.053 13.0 0.2 1.7 1 1 0 1 1 1 0 Rad50 zinc hook motif zf-ISL3 PF14690.1 gi|407465626|ref|YP_006776508.1| - 0.054 13.5 0.8 6.7 6.8 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Sgf11 PF08209.6 gi|407465626|ref|YP_006776508.1| - 0.076 12.3 0.7 3.1 7.2 0.0 2.1 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-CHY PF05495.7 gi|407465626|ref|YP_006776508.1| - 0.078 13.1 0.4 0.098 12.8 0.3 1.1 1 0 0 1 1 1 0 CHY zinc finger Stc1 PF12898.2 gi|407465626|ref|YP_006776508.1| - 0.083 12.9 0.7 0.14 12.2 0.5 1.3 1 1 0 1 1 1 0 Stc1 domain zf-C2H2_4 PF13894.1 gi|407465626|ref|YP_006776508.1| - 0.093 13.1 0.3 14 6.3 0.1 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger DiS_P_DiS PF06750.8 gi|407465626|ref|YP_006776508.1| - 0.099 12.4 1.1 0.51 10.1 0.8 1.8 1 1 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain Elf1 PF05129.8 gi|407465626|ref|YP_006776508.1| - 0.1 12.2 2.3 2.8 7.6 0.2 2.0 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like TFIIS_C PF01096.13 gi|407465626|ref|YP_006776508.1| - 0.11 12.1 2.6 4.5 6.9 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-dskA_traR PF01258.12 gi|407465626|ref|YP_006776508.1| - 0.11 12.2 1.3 4.6 7.0 0.0 2.1 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger zinc-ribbons_6 PF07191.7 gi|407465626|ref|YP_006776508.1| - 0.13 12.0 1.3 4.4 7.1 1.1 2.1 1 1 2 3 3 3 0 zinc-ribbons Nudix_N_2 PF14803.1 gi|407465626|ref|YP_006776508.1| - 0.14 11.8 0.9 4.1 7.1 0.1 2.1 2 0 0 2 2 2 0 Nudix N-terminal DUF329 PF03884.9 gi|407465626|ref|YP_006776508.1| - 0.16 11.5 0.8 2.8 7.5 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF329) DNA_ligase_ZBD PF03119.11 gi|407465626|ref|YP_006776508.1| - 0.19 11.4 0.4 0.19 11.4 0.3 1.8 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain YhfH PF14149.1 gi|407465626|ref|YP_006776508.1| - 0.22 11.3 6.4 3.8 7.3 1.0 2.2 2 0 0 2 2 2 0 YhfH-like protein OrfB_Zn_ribbon PF07282.6 gi|407465626|ref|YP_006776508.1| - 0.23 11.1 2.6 0.65 9.6 1.8 1.7 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Lar_restr_allev PF14354.1 gi|407465626|ref|YP_006776508.1| - 0.23 11.7 2.1 11 6.3 0.2 1.9 1 1 1 2 2 2 0 Restriction alleviation protein Lar zf-NADH-PPase PF09297.6 gi|407465626|ref|YP_006776508.1| - 0.31 10.5 4.5 4.3 6.9 0.2 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Zn_ribbon_recom PF13408.1 gi|407465626|ref|YP_006776508.1| - 0.77 10.0 4.4 3.5 7.9 0.5 2.1 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain CpXC PF14353.1 gi|407465626|ref|YP_006776508.1| - 0.82 9.6 2.8 37 4.2 2.0 2.1 1 1 0 1 1 1 0 CpXC protein ADK_lid PF05191.9 gi|407465626|ref|YP_006776508.1| - 1.4 8.6 5.5 36 4.1 3.8 2.1 1 1 0 1 1 1 0 Adenylate kinase, active site lid DUF35 PF01796.12 gi|407465627|ref|YP_006776509.1| - 6.9e-08 32.6 0.3 9.1e-08 32.2 0.2 1.1 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|407465627|ref|YP_006776509.1| - 7.7e-05 22.4 0.2 0.00011 21.9 0.1 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_2 PF13240.1 gi|407465627|ref|YP_006776509.1| - 0.014 14.8 3.4 0.027 13.9 2.3 1.4 1 0 0 1 1 1 0 zinc-ribbon domain DZR PF12773.2 gi|407465627|ref|YP_006776509.1| - 0.056 13.2 0.6 0.081 12.7 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|407465627|ref|YP_006776509.1| - 0.092 11.9 0.8 0.17 11.1 0.6 1.5 1 0 0 1 1 1 0 zinc-ribbon domain RNHCP PF12647.2 gi|407465627|ref|YP_006776509.1| - 0.22 11.3 1.2 0.68 9.8 0.8 1.8 1 1 0 1 1 1 0 RNHCP domain Ribosomal_S27e PF01667.12 gi|407465627|ref|YP_006776509.1| - 0.31 10.6 2.4 0.7 9.4 1.4 1.8 1 1 1 2 2 2 0 Ribosomal protein S27 Nudix_N_2 PF14803.1 gi|407465627|ref|YP_006776509.1| - 0.77 9.5 3.4 5.6 6.7 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal Thiolase_C PF02803.13 gi|407465628|ref|YP_006776510.1| - 2.2e-12 46.4 0.6 6.2e-10 38.5 0.0 3.3 2 1 1 3 3 3 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 gi|407465628|ref|YP_006776510.1| - 3.4e-08 32.8 0.1 2.3e-07 30.0 0.0 2.3 3 0 0 3 3 3 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.21 gi|407465628|ref|YP_006776510.1| - 0.00068 19.1 0.3 0.054 12.9 0.1 2.6 3 0 0 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.17 gi|407465628|ref|YP_006776510.1| - 0.02 14.7 0.6 2.2 8.1 0.0 3.3 3 0 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain zf-C4_Topoisom PF01396.14 gi|407465629|ref|YP_006776511.1| - 9.1e-06 25.0 1.4 9.1e-06 25.0 1.0 2.7 2 1 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger ZZ PF00569.12 gi|407465629|ref|YP_006776511.1| - 0.053 13.0 0.9 0.32 10.5 0.3 2.3 2 1 0 2 2 2 0 Zinc finger, ZZ type Ogr_Delta PF04606.7 gi|407465629|ref|YP_006776511.1| - 0.33 10.6 9.1 2.8 7.6 0.9 3.5 2 2 0 2 2 2 0 Ogr/Delta-like zinc finger CN_hydrolase PF00795.17 gi|407465630|ref|YP_006776512.1| - 7.6e-31 106.9 0.0 1.1e-30 106.3 0.0 1.2 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Tautomerase PF01361.16 gi|407465631|ref|YP_006776513.1| - 5.5e-14 51.5 0.0 5.8e-14 51.4 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_2 PF14552.1 gi|407465631|ref|YP_006776513.1| - 1.5e-08 34.5 0.0 1.5e-08 34.4 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme DUF1904 PF08921.6 gi|407465631|ref|YP_006776513.1| - 0.0075 16.2 0.0 0.0075 16.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1904) Tautomerase_3 PF14832.1 gi|407465631|ref|YP_006776513.1| - 0.018 15.0 0.0 0.019 14.9 0.0 1.0 1 0 0 1 1 1 0 Putative oxalocrotonate tautomerase enzyme Rhomboid PF01694.17 gi|407465632|ref|YP_006776514.1| - 9e-32 110.1 21.2 9e-32 110.1 14.7 1.5 2 0 0 2 2 2 1 Rhomboid family Cupredoxin_1 PF13473.1 gi|407465637|ref|YP_006776519.1| - 0.0028 17.5 0.1 0.086 12.7 0.0 2.8 2 2 0 2 2 2 1 Cupredoxin-like domain Transgly_assoc PF04226.8 gi|407465638|ref|YP_006776520.1| - 0.041 13.9 1.0 0.077 13.0 0.7 1.4 1 0 0 1 1 1 0 Transglycosylase associated protein CopD PF05425.8 gi|407465639|ref|YP_006776521.1| - 3.4e-13 49.6 2.4 3.4e-13 49.6 1.7 2.6 2 0 0 2 2 2 1 Copper resistance protein D SGL PF08450.7 gi|407465639|ref|YP_006776521.1| - 9.4e-13 48.0 0.3 0.006 15.9 0.1 5.1 1 1 4 5 5 5 5 SMP-30/Gluconolaconase/LRE-like region CopC PF04234.7 gi|407465639|ref|YP_006776521.1| - 1.2e-12 48.2 0.0 3.8e-12 46.6 0.0 1.9 1 0 0 1 1 1 1 CopC domain Reg_prop PF07494.6 gi|407465639|ref|YP_006776521.1| - 2.5e-06 26.8 13.5 1.3 9.3 0.0 7.9 8 0 0 8 8 8 2 Two component regulator propeller YtkA PF13115.1 gi|407465639|ref|YP_006776521.1| - 0.0044 17.3 0.1 0.084 13.2 0.0 2.4 2 0 0 2 2 2 1 YtkA-like Big_3_4 PF13754.1 gi|407465639|ref|YP_006776521.1| - 0.2 11.9 3.0 8 6.8 0.0 3.1 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) PPC PF04151.10 gi|407465639|ref|YP_006776521.1| - 1.2 10.1 7.2 1.8 9.5 0.6 3.5 3 0 0 3 3 3 0 Bacterial pre-peptidase C-terminal domain ABC-3 PF00950.12 gi|407465640|ref|YP_006776522.1| - 6e-65 219.0 37.6 6.7e-65 218.9 26.1 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.13 gi|407465640|ref|YP_006776522.1| - 3.3e-06 26.1 34.7 7.7e-06 24.9 23.9 1.6 1 1 0 1 1 1 1 FecCD transport family ABC_tran PF00005.22 gi|407465641|ref|YP_006776523.1| - 5.4e-35 120.6 0.0 1.3e-34 119.4 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|407465641|ref|YP_006776523.1| - 1e-14 55.1 1.5 1.1e-12 48.5 1.0 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|407465641|ref|YP_006776523.1| - 1.2e-05 24.6 1.5 0.00015 21.1 1.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|407465641|ref|YP_006776523.1| - 4.7e-05 22.6 4.5 0.0019 17.3 0.8 2.3 1 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|407465641|ref|YP_006776523.1| - 0.00052 19.4 0.1 0.00099 18.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|407465641|ref|YP_006776523.1| - 0.00057 20.2 4.1 0.0016 18.8 2.8 1.8 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|407465641|ref|YP_006776523.1| - 0.0014 18.4 0.0 0.055 13.3 0.0 2.5 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_13 PF13166.1 gi|407465641|ref|YP_006776523.1| - 0.002 16.7 1.0 0.36 9.2 0.2 2.1 2 0 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.18 gi|407465641|ref|YP_006776523.1| - 0.0025 17.7 0.2 0.0057 16.5 0.1 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase IstB_IS21 PF01695.12 gi|407465641|ref|YP_006776523.1| - 0.0049 16.2 0.6 2.2 7.6 0.0 2.8 2 1 1 3 3 3 1 IstB-like ATP binding protein AAA_14 PF13173.1 gi|407465641|ref|YP_006776523.1| - 0.016 15.1 0.5 0.34 10.8 0.0 2.4 1 1 0 2 2 2 0 AAA domain AAA_10 PF12846.2 gi|407465641|ref|YP_006776523.1| - 0.016 14.6 0.5 0.2 11.0 0.1 2.1 1 1 1 2 2 2 0 AAA-like domain DUF258 PF03193.11 gi|407465641|ref|YP_006776523.1| - 0.037 13.2 0.0 0.072 12.2 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function, DUF258 Arch_ATPase PF01637.13 gi|407465641|ref|YP_006776523.1| - 0.043 13.5 0.2 0.068 12.8 0.1 1.5 1 1 0 1 1 1 0 Archaeal ATPase AAA_33 PF13671.1 gi|407465641|ref|YP_006776523.1| - 0.044 13.6 0.1 0.14 12.0 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|407465641|ref|YP_006776523.1| - 0.053 12.9 0.0 0.12 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|407465641|ref|YP_006776523.1| - 0.059 13.5 0.3 0.33 11.1 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA PF00004.24 gi|407465641|ref|YP_006776523.1| - 0.083 13.0 1.1 0.94 9.6 0.8 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.1 gi|407465641|ref|YP_006776523.1| - 0.12 13.2 2.0 1.7 9.4 1.4 2.7 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.12 gi|407465641|ref|YP_006776523.1| - 1.1 9.0 6.0 8.5 6.1 1.0 2.3 1 1 1 2 2 2 0 Domain of unknown function DUF87 TroA PF01297.12 gi|407465642|ref|YP_006776524.1| - 1.1e-76 257.4 1.5 1.3e-76 257.2 1.0 1.0 1 0 0 1 1 1 1 Periplasmic solute binding protein family NikR_C PF08753.6 gi|407465643|ref|YP_006776525.1| - 5.7e-10 38.9 2.5 8.4e-10 38.4 1.7 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|407465643|ref|YP_006776525.1| - 0.00027 20.6 0.1 0.00043 20.0 0.1 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family DUF2191 PF09957.4 gi|407465643|ref|YP_006776525.1| - 0.0068 16.1 0.0 0.015 15.0 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2191) LON PF02190.11 gi|407465645|ref|YP_006776527.1| - 1.3e-18 67.4 0.2 1.8e-18 66.9 0.1 1.2 1 0 0 1 1 1 1 ATP-dependent protease La (LON) domain YlzJ PF14035.1 gi|407465645|ref|YP_006776527.1| - 0.11 12.5 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 YlzJ-like protein OTCace_N PF02729.16 gi|407465646|ref|YP_006776528.1| - 6.1e-40 136.1 0.0 9.5e-40 135.5 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.19 gi|407465646|ref|YP_006776528.1| - 5e-38 130.4 0.0 7e-38 129.9 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PyrI PF01948.13 gi|407465647|ref|YP_006776529.1| - 3.9e-34 116.5 2.8 6.4e-34 115.8 2.0 1.3 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.10 gi|407465647|ref|YP_006776529.1| - 8.7e-15 53.9 1.9 1.5e-14 53.1 1.4 1.4 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF1936 PF09151.5 gi|407465647|ref|YP_006776529.1| - 0.022 14.2 0.3 0.052 13.0 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) ATP-synt_C PF00137.16 gi|407465648|ref|YP_006776530.1| - 7.5e-20 70.6 17.7 7.5e-20 70.6 12.3 1.9 2 0 0 2 2 2 1 ATP synthase subunit C ATP-synt_D PF01813.12 gi|407465649|ref|YP_006776531.1| - 9.6e-53 178.6 5.5 1.1e-52 178.4 3.8 1.0 1 0 0 1 1 1 1 ATP synthase subunit D PMC2NT PF08066.7 gi|407465649|ref|YP_006776531.1| - 0.0062 16.8 0.3 1.9 8.8 0.0 2.6 2 1 0 2 2 2 2 PMC2NT (NUC016) domain PerC PF06069.6 gi|407465649|ref|YP_006776531.1| - 0.041 13.9 0.0 0.27 11.2 0.0 2.1 2 0 0 2 2 2 0 PerC transcriptional activator DUF1395 PF07160.7 gi|407465649|ref|YP_006776531.1| - 0.1 12.0 4.7 1.2 8.5 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1395) DUF1019 PF06254.6 gi|407465649|ref|YP_006776531.1| - 2.1 8.5 6.1 1.8 8.7 0.3 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1019) ATP-synt_ab PF00006.20 gi|407465650|ref|YP_006776532.1| - 1.9e-64 217.1 0.0 2.6e-64 216.6 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|407465650|ref|YP_006776532.1| - 2.6e-14 53.6 0.3 4.8e-14 52.8 0.2 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|407465650|ref|YP_006776532.1| - 1.9e-11 44.0 2.1 4.5e-11 42.8 1.5 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.5 gi|407465650|ref|YP_006776532.1| - 7.4e-05 22.5 2.0 0.00023 20.9 0.7 2.2 2 0 0 2 2 2 1 HAS barrel domain ATP-synt_ab PF00006.20 gi|407465651|ref|YP_006776533.1| - 1.1e-95 319.1 0.0 1.6e-95 318.6 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|407465651|ref|YP_006776533.1| - 6.2e-14 52.4 0.7 1.2e-13 51.5 0.5 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|407465651|ref|YP_006776533.1| - 9.1e-13 48.2 0.4 2.1e-12 47.0 0.3 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA_19 PF13245.1 gi|407465651|ref|YP_006776533.1| - 0.0035 17.0 0.1 0.15 11.8 0.0 2.6 2 0 0 2 2 2 1 Part of AAA domain AAA_22 PF13401.1 gi|407465651|ref|YP_006776533.1| - 0.074 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain Peptidase_M23 PF01551.17 gi|407465651|ref|YP_006776533.1| - 0.086 12.8 0.2 0.43 10.6 0.0 2.1 2 0 0 2 2 2 0 Peptidase family M23 DUF853 PF05872.7 gi|407465651|ref|YP_006776533.1| - 0.095 11.0 0.4 0.16 10.3 0.3 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) vATP-synt_E PF01991.13 gi|407465652|ref|YP_006776534.1| - 2.1e-22 79.4 7.8 6.5e-22 77.7 5.0 1.9 1 1 1 2 2 2 1 ATP synthase (E/31 kDa) subunit OSCP PF00213.13 gi|407465652|ref|YP_006776534.1| - 0.032 14.0 3.9 0.039 13.8 1.3 1.9 1 1 1 2 2 2 0 ATP synthase delta (OSCP) subunit YtzH PF14165.1 gi|407465652|ref|YP_006776534.1| - 0.034 14.3 5.1 1.4 9.2 0.1 3.0 3 0 0 3 3 3 0 YtzH-like protein ATP-synt_B PF00430.13 gi|407465652|ref|YP_006776534.1| - 0.051 13.3 5.5 0.095 12.5 3.8 1.5 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) PhoU PF01895.14 gi|407465652|ref|YP_006776534.1| - 0.061 13.7 2.0 0.12 12.8 0.8 2.0 1 1 1 2 2 2 0 PhoU domain DNA_pol3_beta PF00712.14 gi|407465652|ref|YP_006776534.1| - 0.064 13.1 0.6 3.5 7.5 0.0 2.7 2 2 1 3 3 3 0 DNA polymerase III beta subunit, N-terminal domain TMCO5 PF14992.1 gi|407465652|ref|YP_006776534.1| - 0.13 11.3 4.7 0.15 11.1 3.2 1.1 1 0 0 1 1 1 0 TMCO5 family Tropomyosin_1 PF12718.2 gi|407465652|ref|YP_006776534.1| - 0.17 11.7 4.2 0.25 11.1 2.9 1.4 1 0 0 1 1 1 0 Tropomyosin like LMBR1 PF04791.11 gi|407465652|ref|YP_006776534.1| - 0.2 10.1 2.4 0.23 9.9 1.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF3150 PF11348.3 gi|407465652|ref|YP_006776534.1| - 0.21 10.6 2.5 0.25 10.4 1.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3150) DUF4164 PF13747.1 gi|407465652|ref|YP_006776534.1| - 0.36 10.9 5.0 0.45 10.6 0.9 2.8 3 1 1 4 4 4 0 Domain of unknown function (DUF4164) V_ATPase_I PF01496.14 gi|407465653|ref|YP_006776535.1| - 1.2e-55 188.7 17.1 3.4e-55 187.2 11.8 1.5 1 1 0 1 1 1 1 V-type ATPase 116kDa subunit family Med11 PF10280.4 gi|407465653|ref|YP_006776535.1| - 0.0033 17.4 0.8 0.77 9.8 0.3 2.6 1 1 1 2 2 2 2 Mediator complex protein HGD-D PF06050.8 gi|407465653|ref|YP_006776535.1| - 0.11 11.3 0.1 0.18 10.5 0.0 1.3 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component V-SNARE PF05008.10 gi|407465653|ref|YP_006776535.1| - 0.59 10.3 8.7 2 8.6 0.6 4.1 4 1 1 5 5 5 0 Vesicle transport v-SNARE protein N-terminus Laminin_II PF06009.7 gi|407465653|ref|YP_006776535.1| - 0.9 9.2 4.5 4 7.1 0.2 2.6 2 0 0 2 2 2 0 Laminin Domain II TMF_TATA_bd PF12325.3 gi|407465653|ref|YP_006776535.1| - 0.99 9.1 5.6 1.2 8.9 0.2 2.3 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding CCDC-167 PF15188.1 gi|407465653|ref|YP_006776535.1| - 9.5 6.2 6.8 7.7 6.5 1.0 3.0 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 167 ATG19_autophagy PF12744.2 gi|407465654|ref|YP_006776536.1| - 0.029 13.6 2.6 0.043 13.0 0.3 2.1 2 0 0 2 2 2 0 Autophagy protein Atg19, Atg8-binding Usp PF00582.21 gi|407465655|ref|YP_006776537.1| - 1.3e-06 28.6 0.0 1.5e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Terminase_1 PF03354.10 gi|407465655|ref|YP_006776537.1| - 0.003 16.0 0.3 0.0034 15.8 0.2 1.0 1 0 0 1 1 1 1 Phage Terminase Rhodanese PF00581.15 gi|407465656|ref|YP_006776538.1| - 3.8e-42 143.2 0.1 4.9e-21 75.1 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain Ammonium_transp PF00909.16 gi|407465658|ref|YP_006776540.1| - 5.9e-110 367.4 35.5 1.3e-109 366.3 24.6 1.5 1 1 0 1 1 1 1 Ammonium Transporter Family TcdA_TcdB_pore PF12920.2 gi|407465658|ref|YP_006776540.1| - 8.1 4.2 4.6 12 3.6 3.2 1.1 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain SAM_2 PF07647.12 gi|407465659|ref|YP_006776541.1| - 0.042 13.6 0.1 0.088 12.6 0.1 1.5 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) CDC45 PF02724.9 gi|407465659|ref|YP_006776541.1| - 0.064 11.2 0.2 0.088 10.8 0.1 1.1 1 0 0 1 1 1 0 CDC45-like protein vATP-synt_AC39 PF01992.11 gi|407465660|ref|YP_006776542.1| - 4.9e-40 137.6 9.2 5.9e-40 137.4 6.4 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit DNA_ligase_OB PF03120.11 gi|407465660|ref|YP_006776542.1| - 0.089 12.4 0.1 8.6 6.1 0.0 3.0 3 0 0 3 3 3 0 NAD-dependent DNA ligase OB-fold domain Pmp3 PF01679.12 gi|407465661|ref|YP_006776543.1| - 0.15 11.7 4.4 0.25 11.0 2.8 1.7 1 1 0 1 1 1 0 Proteolipid membrane potential modulator Cas_Cas4 PF01930.12 gi|407465662|ref|YP_006776544.1| - 1.3e-05 25.2 0.7 2.6e-05 24.2 0.5 1.6 1 1 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.2 gi|407465662|ref|YP_006776544.1| - 0.081 12.2 1.2 2.1 7.6 0.1 2.1 2 0 0 2 2 2 0 PD-(D/E)XK nuclease superfamily AA_kinase PF00696.23 gi|407465665|ref|YP_006776547.1| - 4e-31 108.4 1.5 4.9e-31 108.1 1.0 1.1 1 0 0 1 1 1 1 Amino acid kinase family HD PF01966.17 gi|407465666|ref|YP_006776548.1| - 3.9e-16 59.1 0.7 6.3e-16 58.4 0.1 1.7 2 0 0 2 2 2 1 HD domain DUF4216 PF13952.1 gi|407465666|ref|YP_006776548.1| - 0.11 11.9 0.1 0.52 9.8 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4216) Thymidylate_kin PF02223.12 gi|407465667|ref|YP_006776549.1| - 2.9e-35 121.3 0.3 3.3e-35 121.1 0.2 1.0 1 0 0 1 1 1 1 Thymidylate kinase ADK PF00406.17 gi|407465667|ref|YP_006776549.1| - 0.009 15.9 0.1 0.064 13.1 0.1 2.0 1 1 0 1 1 1 1 Adenylate kinase DUF2183 PF09949.4 gi|407465667|ref|YP_006776549.1| - 0.26 11.2 1.8 0.54 10.2 0.5 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2183) HSP20 PF00011.16 gi|407465668|ref|YP_006776550.1| - 5.2e-12 45.5 0.1 6.3e-12 45.2 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ABC1 PF03109.11 gi|407465669|ref|YP_006776551.1| - 1e-23 83.5 0.4 5.7e-23 81.1 0.0 2.3 3 0 0 3 3 3 1 ABC1 family RIO1 PF01163.17 gi|407465669|ref|YP_006776551.1| - 0.00012 21.4 0.3 0.00027 20.3 0.2 1.5 1 0 0 1 1 1 1 RIO1 family APH PF01636.18 gi|407465669|ref|YP_006776551.1| - 0.0031 17.2 0.0 0.058 13.1 0.0 2.4 1 1 1 2 2 2 1 Phosphotransferase enzyme family NAAA-beta PF15508.1 gi|407465669|ref|YP_006776551.1| - 0.065 13.5 1.3 17 5.8 0.0 3.6 3 1 1 4 4 4 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase DUF4229 PF14012.1 gi|407465671|ref|YP_006776553.1| - 0.01 15.7 0.8 0.015 15.2 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4229) UPF0259 PF06790.6 gi|407465671|ref|YP_006776553.1| - 0.025 14.0 0.5 0.027 13.8 0.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0259) NfeD PF01957.13 gi|407465671|ref|YP_006776553.1| - 0.048 13.7 0.7 0.051 13.7 0.5 1.0 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding Fig1 PF12351.3 gi|407465671|ref|YP_006776553.1| - 0.062 13.1 0.5 0.078 12.8 0.3 1.0 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 DUF2955 PF11168.3 gi|407465671|ref|YP_006776553.1| - 0.064 12.9 2.0 0.069 12.8 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2955) SdpI PF13630.1 gi|407465671|ref|YP_006776553.1| - 0.066 12.9 0.8 0.085 12.5 0.6 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF2975 PF11188.3 gi|407465671|ref|YP_006776553.1| - 0.074 12.7 0.7 0.085 12.5 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) Pox_A14 PF05767.7 gi|407465671|ref|YP_006776553.1| - 0.37 10.7 4.7 5 7.1 0.2 2.0 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 ALIX_LYPXL_bnd PF13949.1 gi|407465672|ref|YP_006776554.1| - 0.00096 18.1 2.3 0.00096 18.1 1.6 1.9 1 1 1 2 2 2 1 ALIX V-shaped domain binding to HIV TMCO5 PF14992.1 gi|407465672|ref|YP_006776554.1| - 0.001 18.2 3.0 0.0011 18.1 2.1 1.2 1 0 0 1 1 1 1 TMCO5 family PA26 PF04636.8 gi|407465672|ref|YP_006776554.1| - 0.0014 17.4 0.5 0.0016 17.2 0.4 1.0 1 0 0 1 1 1 1 PA26 p53-induced protein (sestrin) DUF342 PF03961.8 gi|407465672|ref|YP_006776554.1| - 0.0035 15.8 4.7 0.0039 15.6 3.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF342) IncA PF04156.9 gi|407465672|ref|YP_006776554.1| - 0.0062 16.1 15.3 0.013 15.0 10.6 1.5 1 1 0 1 1 1 1 IncA protein Lipoprotein_7 PF01540.11 gi|407465672|ref|YP_006776554.1| - 0.0085 15.1 4.0 0.01 14.9 2.8 1.0 1 0 0 1 1 1 1 Adhesin lipoprotein Allexi_40kDa PF05549.6 gi|407465672|ref|YP_006776554.1| - 0.011 15.0 3.0 0.012 14.8 2.1 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein RmuC PF02646.11 gi|407465672|ref|YP_006776554.1| - 0.012 14.4 5.7 0.016 14.1 3.9 1.1 1 0 0 1 1 1 0 RmuC family FUN14 PF04930.10 gi|407465672|ref|YP_006776554.1| - 0.014 15.6 2.2 0.061 13.6 1.5 1.9 1 1 0 1 1 1 0 FUN14 family Ax_dynein_light PF10211.4 gi|407465672|ref|YP_006776554.1| - 0.033 14.0 10.0 0.039 13.7 6.9 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain DUF1664 PF07889.7 gi|407465672|ref|YP_006776554.1| - 0.033 13.9 4.3 0.039 13.7 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) ALMT PF11744.3 gi|407465672|ref|YP_006776554.1| - 0.034 12.7 1.8 0.035 12.7 1.2 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter YlqD PF11068.3 gi|407465672|ref|YP_006776554.1| - 0.054 13.5 9.1 0.067 13.2 6.3 1.1 1 0 0 1 1 1 0 YlqD protein Spectrin PF00435.16 gi|407465672|ref|YP_006776554.1| - 0.056 13.7 6.9 0.1 12.9 4.6 1.5 1 1 0 1 1 1 0 Spectrin repeat V_ATPase_I PF01496.14 gi|407465672|ref|YP_006776554.1| - 0.061 11.1 3.3 0.072 10.9 2.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family THUMP PF02926.12 gi|407465672|ref|YP_006776554.1| - 0.074 12.9 1.5 0.086 12.7 1.0 1.1 1 0 0 1 1 1 0 THUMP domain Carbpep_Y_N PF05388.6 gi|407465672|ref|YP_006776554.1| - 0.081 13.0 2.4 0.35 11.0 1.7 1.9 1 1 0 1 1 1 0 Carboxypeptidase Y pro-peptide Peptidase_M3_N PF08439.5 gi|407465672|ref|YP_006776554.1| - 0.097 12.7 5.0 0.09 12.8 1.8 2.0 1 1 1 2 2 2 0 Oligopeptidase F FPN1 PF06963.7 gi|407465672|ref|YP_006776554.1| - 0.1 10.9 0.1 0.1 10.9 0.1 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) CENP-H PF05837.7 gi|407465672|ref|YP_006776554.1| - 0.1 12.7 8.4 0.13 12.4 5.9 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) CUE PF02845.11 gi|407465672|ref|YP_006776554.1| - 0.11 12.0 0.6 0.28 10.7 0.0 2.0 2 0 0 2 2 2 0 CUE domain Streptin-Immun PF11083.3 gi|407465672|ref|YP_006776554.1| - 0.13 12.2 10.8 0.19 11.7 5.1 2.0 1 1 1 2 2 2 0 Lantibiotic streptin immunity protein AF0941-like PF14591.1 gi|407465672|ref|YP_006776554.1| - 0.14 12.2 8.2 0.21 11.6 5.7 1.3 1 0 0 1 1 1 0 AF0941-like Occludin_ELL PF07303.8 gi|407465672|ref|YP_006776554.1| - 0.15 12.8 7.2 0.22 12.2 5.0 1.3 1 0 0 1 1 1 0 Occludin homology domain Activator-TraM PF11657.3 gi|407465672|ref|YP_006776554.1| - 0.17 11.3 5.2 0.58 9.6 3.6 1.8 1 1 0 1 1 1 0 Transcriptional activator TraM Acetate_kinase PF00871.12 gi|407465672|ref|YP_006776554.1| - 0.18 10.3 2.3 0.19 10.2 1.6 1.1 1 0 0 1 1 1 0 Acetokinase family Reo_sigmaC PF04582.7 gi|407465672|ref|YP_006776554.1| - 0.18 10.9 0.6 0.21 10.7 0.4 1.0 1 0 0 1 1 1 0 Reovirus sigma C capsid protein OmpH PF03938.9 gi|407465672|ref|YP_006776554.1| - 0.19 11.6 6.8 0.33 10.8 4.7 1.5 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4559 PF15112.1 gi|407465672|ref|YP_006776554.1| - 0.19 10.8 6.9 0.27 10.3 4.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) SPT16 PF08644.6 gi|407465672|ref|YP_006776554.1| - 0.21 11.4 4.8 0.26 11.1 3.3 1.1 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) KNOX2 PF03791.8 gi|407465672|ref|YP_006776554.1| - 0.23 10.7 3.8 0.17 11.1 1.1 1.8 2 0 0 2 2 2 0 KNOX2 domain ParB PF08775.5 gi|407465672|ref|YP_006776554.1| - 0.24 11.7 7.9 0.29 11.4 5.5 1.1 1 0 0 1 1 1 0 ParB family Spc7 PF08317.6 gi|407465672|ref|YP_006776554.1| - 0.32 9.6 12.1 0.4 9.3 8.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Peptidase_C6 PF00851.13 gi|407465672|ref|YP_006776554.1| - 0.35 9.4 3.5 0.41 9.2 2.4 1.1 1 0 0 1 1 1 0 Helper component proteinase DUF1268 PF06896.6 gi|407465672|ref|YP_006776554.1| - 0.4 11.0 8.9 0.5 10.7 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1268) DUF4635 PF15466.1 gi|407465672|ref|YP_006776554.1| - 0.41 9.9 5.8 0.6 9.3 4.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4635) Fib_alpha PF08702.5 gi|407465672|ref|YP_006776554.1| - 0.42 10.7 7.0 0.51 10.4 4.9 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2203 PF09969.4 gi|407465672|ref|YP_006776554.1| - 0.42 10.8 5.2 0.77 9.9 3.6 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) SlyX PF04102.7 gi|407465672|ref|YP_006776554.1| - 0.56 10.6 8.8 0.38 11.1 4.4 1.8 1 1 1 2 2 2 0 SlyX Syntaxin-6_N PF09177.6 gi|407465672|ref|YP_006776554.1| - 0.58 10.6 7.0 1 9.8 4.8 1.5 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Syntaxin PF00804.20 gi|407465672|ref|YP_006776554.1| - 0.63 10.2 8.5 0.88 9.7 5.9 1.3 1 0 0 1 1 1 0 Syntaxin DUF1041 PF06292.12 gi|407465672|ref|YP_006776554.1| - 0.65 10.1 5.3 0.89 9.7 3.7 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1041) WXG100 PF06013.7 gi|407465672|ref|YP_006776554.1| - 0.66 10.0 3.0 7.7 6.6 2.1 2.1 1 1 0 1 1 1 0 Proteins of 100 residues with WXG DUF3523 PF12037.3 gi|407465672|ref|YP_006776554.1| - 0.7 8.8 10.2 0.78 8.6 7.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) DUF3450 PF11932.3 gi|407465672|ref|YP_006776554.1| - 0.72 9.0 8.3 1.6 7.9 5.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) End3 PF12761.2 gi|407465672|ref|YP_006776554.1| - 0.74 9.4 8.4 0.95 9.0 5.8 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 DASH_Duo1 PF08651.5 gi|407465672|ref|YP_006776554.1| - 0.82 9.2 8.0 0.95 9.0 0.9 2.1 1 1 1 2 2 2 0 DASH complex subunit Duo1 KxDL PF10241.4 gi|407465672|ref|YP_006776554.1| - 1.2 9.0 6.0 17 5.4 4.2 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein CENP-Q PF13094.1 gi|407465672|ref|YP_006776554.1| - 1.2 9.1 12.0 5.4 7.0 8.4 1.8 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit TMPIT PF07851.8 gi|407465672|ref|YP_006776554.1| - 1.2 8.1 8.6 1.5 7.7 6.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF3847 PF12958.2 gi|407465672|ref|YP_006776554.1| - 1.3 8.8 9.3 1.9 8.3 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3847) P4Ha_N PF08336.6 gi|407465672|ref|YP_006776554.1| - 1.9 8.3 9.0 1.6 8.5 2.1 2.0 1 1 1 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region DUF4097 PF13349.1 gi|407465672|ref|YP_006776554.1| - 2.2 7.7 8.3 15 5.1 5.8 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4097) COG2 PF06148.6 gi|407465672|ref|YP_006776554.1| - 2.3 8.0 7.2 32 4.3 5.0 2.0 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 zf-C4H2 PF10146.4 gi|407465672|ref|YP_006776554.1| - 3.3 7.6 10.8 4 7.3 7.5 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4404 PF14357.1 gi|407465672|ref|YP_006776554.1| - 4.7 7.6 8.9 6 7.3 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) CCDC-167 PF15188.1 gi|407465672|ref|YP_006776554.1| - 5.8 6.9 10.6 18 5.3 7.3 1.9 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 MerR-DNA-bind PF09278.6 gi|407465672|ref|YP_006776554.1| - 6.1 7.3 5.9 1.6e+02 2.7 4.1 2.8 1 1 0 1 1 1 0 MerR, DNA binding DUF3782 PF12644.2 gi|407465672|ref|YP_006776554.1| - 7.7 6.3 7.0 60 3.5 4.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3782) DivIVA PF05103.8 gi|407465672|ref|YP_006776554.1| - 8 6.5 13.4 9 6.3 3.3 2.0 1 1 1 2 2 2 0 DivIVA protein NPCBM_assoc PF10633.4 gi|407465673|ref|YP_006776555.1| - 0.00052 20.0 0.3 1.4 9.0 0.0 3.9 4 2 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase Rib PF08428.5 gi|407465673|ref|YP_006776555.1| - 0.025 14.3 0.2 0.091 12.5 0.0 2.0 2 0 0 2 2 2 0 Rib/alpha-like repeat ABC_tran PF00005.22 gi|407465674|ref|YP_006776556.1| - 8.8e-20 71.4 0.0 1.3e-19 70.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.14 gi|407465674|ref|YP_006776556.1| - 9.4e-06 25.0 0.2 1.2e-05 24.6 0.2 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|407465674|ref|YP_006776556.1| - 3.1e-05 24.0 0.1 4.3e-05 23.6 0.1 1.1 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|407465674|ref|YP_006776556.1| - 0.014 15.3 0.0 0.27 11.1 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Effector_1 PF04518.7 gi|407465674|ref|YP_006776556.1| - 0.014 14.4 0.1 0.021 13.8 0.1 1.3 1 0 0 1 1 1 0 Effector from type III secretion system AAA_15 PF13175.1 gi|407465674|ref|YP_006776556.1| - 0.03 13.3 0.0 0.045 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AviRa PF11599.3 gi|407465674|ref|YP_006776556.1| - 0.031 13.3 0.0 0.038 13.0 0.0 1.2 1 0 0 1 1 1 0 RRNA methyltransferase AviRa AAA_13 PF13166.1 gi|407465674|ref|YP_006776556.1| - 0.033 12.6 0.1 0.046 12.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain MacB_PCD PF12704.2 gi|407465675|ref|YP_006776557.1| - 1.5e-23 83.5 1.7 3.4e-23 82.4 1.2 1.6 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|407465675|ref|YP_006776557.1| - 3.5e-19 68.7 6.4 3.5e-19 68.7 4.4 1.9 2 0 0 2 2 2 1 FtsX-like permease family HTH_AsnC-type PF13404.1 gi|407465676|ref|YP_006776558.1| - 9.5e-19 66.6 1.5 2.8e-10 39.5 0.2 2.3 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|407465676|ref|YP_006776558.1| - 2.3e-17 62.0 8.6 9.3e-09 34.5 0.7 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|407465676|ref|YP_006776558.1| - 4.9e-06 26.1 0.0 0.016 14.8 0.0 2.3 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|407465676|ref|YP_006776558.1| - 1.6e-05 24.4 0.0 0.036 13.7 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_11 PF08279.7 gi|407465676|ref|YP_006776558.1| - 2.3e-05 23.9 0.3 0.013 15.1 0.1 2.7 2 0 0 2 2 2 2 HTH domain HTH_23 PF13384.1 gi|407465676|ref|YP_006776558.1| - 4.1e-05 23.0 0.0 0.33 10.6 0.0 2.5 2 0 0 2 2 2 2 Homeodomain-like domain MarR PF01047.17 gi|407465676|ref|YP_006776558.1| - 0.00019 21.0 3.2 0.0039 16.8 0.2 3.0 3 0 0 3 3 3 1 MarR family Mga PF05043.8 gi|407465676|ref|YP_006776558.1| - 0.00062 19.9 0.1 0.029 14.6 0.1 2.7 2 0 0 2 2 2 1 Mga helix-turn-helix domain GerE PF00196.14 gi|407465676|ref|YP_006776558.1| - 0.0021 17.3 2.5 0.26 10.6 0.4 3.0 4 0 0 4 4 4 1 Bacterial regulatory proteins, luxR family HTH_Mga PF08280.6 gi|407465676|ref|YP_006776558.1| - 0.0022 17.7 7.6 0.036 13.8 1.8 3.4 4 0 0 4 4 4 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_27 PF13463.1 gi|407465676|ref|YP_006776558.1| - 0.0025 18.0 0.2 0.26 11.6 0.0 2.4 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_40 PF14493.1 gi|407465676|ref|YP_006776558.1| - 0.0025 17.9 1.9 0.0043 17.2 0.2 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain Trp_repressor PF01371.14 gi|407465676|ref|YP_006776558.1| - 0.0036 17.1 1.2 0.011 15.5 0.1 2.3 3 0 0 3 3 2 1 Trp repressor protein HTH_5 PF01022.15 gi|407465676|ref|YP_006776558.1| - 0.0036 16.9 0.0 0.016 14.8 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.12 gi|407465676|ref|YP_006776558.1| - 0.017 14.6 0.8 0.43 10.1 0.1 2.7 2 0 0 2 2 2 0 TFIIE alpha subunit HxlR PF01638.12 gi|407465676|ref|YP_006776558.1| - 0.019 14.5 0.2 1.1 8.9 0.0 2.6 2 0 0 2 2 2 0 HxlR-like helix-turn-helix HTH_29 PF13551.1 gi|407465676|ref|YP_006776558.1| - 0.089 12.9 0.0 0.32 11.1 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn helix HTH_DeoR PF08220.7 gi|407465676|ref|YP_006776558.1| - 0.12 11.9 0.2 0.55 9.8 0.1 2.1 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain AF0941-like PF14591.1 gi|407465678|ref|YP_006776560.1| - 0.0018 18.3 0.0 0.0018 18.3 0.0 1.2 1 0 0 1 1 1 1 AF0941-like NUDIX PF00293.23 gi|407465678|ref|YP_006776560.1| - 0.015 14.9 0.0 0.016 14.8 0.0 1.0 1 0 0 1 1 1 0 NUDIX domain DUF986 PF06173.7 gi|407465678|ref|YP_006776560.1| - 0.031 14.1 0.1 0.038 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF986) PhoU PF01895.14 gi|407465679|ref|YP_006776561.1| - 1.6e-11 44.4 4.4 6.8e-08 32.8 0.8 2.5 2 0 0 2 2 2 2 PhoU domain Antitoxin-MazE PF04014.13 gi|407465679|ref|YP_006776561.1| - 0.00094 18.8 0.0 0.0021 17.7 0.0 1.7 1 0 0 1 1 1 1 Antidote-toxin recognition MazE GHMP_kinases_N PF00288.21 gi|407465680|ref|YP_006776562.1| - 1.4e-11 44.2 0.4 2.6e-11 43.4 0.3 1.4 1 0 0 1 1 1 1 GHMP kinases N terminal domain DUF137 PF02006.11 gi|407465681|ref|YP_006776563.1| - 1.7e-73 245.7 5.4 2.2e-73 245.4 3.8 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF137 Pantoate_transf PF02548.10 gi|407465682|ref|YP_006776564.1| - 5.1e-104 347.0 1.4 5.8e-104 346.8 1.0 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.1 gi|407465682|ref|YP_006776564.1| - 0.00027 20.2 0.6 0.001 18.3 0.1 2.1 1 1 1 2 2 2 2 Phosphoenolpyruvate phosphomutase Peptidase_U32 PF01136.14 gi|407465682|ref|YP_006776564.1| - 0.052 12.4 0.4 1.1 8.1 0.0 2.5 2 1 1 3 3 3 0 Peptidase family U32 DFP PF04127.10 gi|407465683|ref|YP_006776565.1| - 2.4e-59 200.0 2.8 6.9e-57 192.0 1.1 2.4 2 0 0 2 2 2 2 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.14 gi|407465683|ref|YP_006776565.1| - 6.2e-27 93.8 0.3 6.2e-27 93.8 0.2 2.7 2 1 0 2 2 2 1 Flavoprotein BRCT PF00533.21 gi|407465683|ref|YP_006776565.1| - 0.011 15.8 0.2 0.71 10.0 0.0 3.0 3 0 0 3 3 3 0 BRCA1 C Terminus (BRCT) domain NAD_binding_10 PF13460.1 gi|407465683|ref|YP_006776565.1| - 0.012 15.6 0.0 0.032 14.2 0.0 1.7 2 0 0 2 2 2 0 NADH(P)-binding YjeF_N PF03853.10 gi|407465683|ref|YP_006776565.1| - 0.015 14.9 0.0 1.5 8.3 0.0 2.5 2 0 0 2 2 2 0 YjeF-related protein N-terminus Ank PF00023.25 gi|407465683|ref|YP_006776565.1| - 0.24 11.3 0.7 4 7.4 0.0 3.0 3 0 0 3 3 3 0 Ankyrin repeat Methyltransf_31 PF13847.1 gi|407465684|ref|YP_006776566.1| - 2.9e-20 72.3 0.1 3.5e-20 72.1 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|407465684|ref|YP_006776566.1| - 5.6e-18 65.2 0.0 1.1e-17 64.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|407465684|ref|YP_006776566.1| - 1.7e-16 60.0 0.2 7.8e-16 57.8 0.0 1.8 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|407465684|ref|YP_006776566.1| - 4.4e-14 52.5 0.0 7.1e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|407465684|ref|YP_006776566.1| - 5.5e-13 49.1 0.0 1.5e-12 47.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|407465684|ref|YP_006776566.1| - 1.2e-12 48.3 0.0 2.5e-12 47.3 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407465684|ref|YP_006776566.1| - 1.5e-11 44.5 0.0 2.9e-11 43.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|407465684|ref|YP_006776566.1| - 1.1e-06 28.1 0.1 2.3e-06 27.0 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.14 gi|407465684|ref|YP_006776566.1| - 1.5e-06 27.9 0.0 3.6e-06 26.6 0.0 1.6 1 1 1 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.6 gi|407465684|ref|YP_006776566.1| - 2.5e-05 23.7 0.0 3.6e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.15 gi|407465684|ref|YP_006776566.1| - 5.8e-05 22.3 0.0 8.2e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase RrnaAD PF00398.15 gi|407465684|ref|YP_006776566.1| - 0.00024 20.2 0.0 0.00041 19.4 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase CheR PF01739.13 gi|407465684|ref|YP_006776566.1| - 0.00034 19.9 0.5 0.0052 16.0 0.0 2.6 2 1 1 3 3 3 1 CheR methyltransferase, SAM binding domain Methyltransf_26 PF13659.1 gi|407465684|ref|YP_006776566.1| - 0.00068 19.6 0.0 0.00095 19.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Gag_p30 PF02093.11 gi|407465684|ref|YP_006776566.1| - 0.0008 18.6 0.1 0.0012 18.0 0.0 1.3 1 0 0 1 1 1 1 Gag P30 core shell protein Methyltransf_5 PF01795.14 gi|407465684|ref|YP_006776566.1| - 0.0016 17.7 0.1 0.16 11.2 0.0 2.7 3 0 0 3 3 3 1 MraW methylase family MetW PF07021.7 gi|407465684|ref|YP_006776566.1| - 0.0031 16.9 0.0 0.0047 16.3 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Fibrillarin PF01269.12 gi|407465684|ref|YP_006776566.1| - 0.014 14.3 0.0 0.022 13.6 0.0 1.4 1 0 0 1 1 1 0 Fibrillarin FtsJ PF01728.14 gi|407465684|ref|YP_006776566.1| - 0.018 15.0 0.0 0.05 13.5 0.0 1.7 2 0 0 2 2 2 0 FtsJ-like methyltransferase PrmA PF06325.8 gi|407465684|ref|YP_006776566.1| - 0.043 12.9 0.0 0.063 12.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Gag_MA PF01140.14 gi|407465684|ref|YP_006776566.1| - 0.052 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Matrix protein (MA), p15 DREV PF05219.7 gi|407465684|ref|YP_006776566.1| - 0.092 11.6 0.0 0.14 11.0 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase GCD14 PF08704.5 gi|407465684|ref|YP_006776566.1| - 0.1 12.0 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DP PF08781.5 gi|407465685|ref|YP_006776567.1| - 0.035 13.7 0.8 0.035 13.7 0.6 1.8 2 0 0 2 2 2 0 Transcription factor DP Big_3 PF07523.7 gi|407465685|ref|YP_006776567.1| - 0.047 13.7 0.0 0.084 12.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) YebF PF13995.1 gi|407465685|ref|YP_006776567.1| - 0.13 12.3 0.1 0.22 11.5 0.1 1.4 1 0 0 1 1 1 0 YebF-like protein Peptidase_M24 PF00557.19 gi|407465686|ref|YP_006776568.1| - 1.1e-52 178.6 0.0 1.5e-52 178.1 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.13 gi|407465686|ref|YP_006776568.1| - 1.8e-13 51.1 0.0 3.5e-13 50.1 0.0 1.5 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain ThiI PF02568.9 gi|407465687|ref|YP_006776569.1| - 1.6e-14 53.8 0.0 3.2e-14 52.8 0.0 1.4 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.11 gi|407465687|ref|YP_006776569.1| - 6.8e-08 31.4 0.0 1.8e-07 30.0 0.0 1.6 2 0 0 2 2 2 1 tRNA methyl transferase DUF814 PF05670.8 gi|407465687|ref|YP_006776569.1| - 2.8e-06 27.1 0.0 5.5e-06 26.1 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF814) Asn_synthase PF00733.16 gi|407465687|ref|YP_006776569.1| - 0.0002 20.9 0.0 0.0003 20.3 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|407465687|ref|YP_006776569.1| - 0.017 14.4 0.1 0.037 13.3 0.1 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC DUF552 PF04472.7 gi|407465688|ref|YP_006776570.1| - 2.7e-15 56.0 0.9 3e-15 55.8 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF552) H_kinase_N PF12282.3 gi|407465688|ref|YP_006776570.1| - 0.036 13.6 0.0 0.056 13.0 0.0 1.2 1 0 0 1 1 1 0 Signal transduction histidine kinase Beta-Casp PF10996.3 gi|407465689|ref|YP_006776571.1| - 1.3e-32 112.3 0.0 2.4e-32 111.5 0.0 1.4 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 gi|407465689|ref|YP_006776571.1| - 2.2e-20 73.1 0.0 4.2e-20 72.2 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|407465689|ref|YP_006776571.1| - 2.1e-14 53.0 0.0 6.6e-14 51.4 0.0 1.9 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|407465689|ref|YP_006776571.1| - 1.1e-11 44.6 0.0 6.9e-11 42.0 0.0 2.1 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|407465689|ref|YP_006776571.1| - 0.018 14.7 0.0 0.044 13.4 0.0 1.8 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Proteasome PF00227.21 gi|407465690|ref|YP_006776572.1| - 2e-51 173.9 0.4 2.3e-51 173.7 0.3 1.0 1 0 0 1 1 1 1 Proteasome subunit Fe-ADH_2 PF13685.1 gi|407465691|ref|YP_006776573.1| - 8.3e-68 228.3 1.3 1e-67 228.0 0.9 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.14 gi|407465691|ref|YP_006776573.1| - 3.5e-24 85.1 0.3 1.1e-23 83.4 0.2 1.7 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|407465691|ref|YP_006776573.1| - 7e-07 28.4 0.3 7.2e-06 25.1 0.1 2.3 1 1 0 1 1 1 1 3-dehydroquinate synthase AIRC PF00731.15 gi|407465691|ref|YP_006776573.1| - 0.054 12.7 0.3 0.2 10.9 0.0 2.1 2 0 0 2 2 2 0 AIR carboxylase DUF640 PF04852.7 gi|407465691|ref|YP_006776573.1| - 0.17 12.0 0.1 1.5 8.9 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF640) FKBP_C PF00254.23 gi|407465692|ref|YP_006776574.1| - 2.8e-12 46.5 0.3 1.4e-11 44.2 0.1 2.2 1 1 1 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase Aminotran_5 PF00266.14 gi|407465693|ref|YP_006776575.1| - 6.4e-38 130.4 0.0 7.8e-38 130.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|407465693|ref|YP_006776575.1| - 0.00015 20.2 0.3 0.00024 19.5 0.2 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme CTP_transf_2 PF01467.21 gi|407465694|ref|YP_006776576.1| - 2.6e-18 66.5 0.0 3.2e-18 66.2 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase RTC PF01137.16 gi|407465695|ref|YP_006776577.1| - 5.1e-72 241.3 0.1 5.9e-72 241.1 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase CopD PF05425.8 gi|407465696|ref|YP_006776578.1| - 5.3e-15 55.5 0.4 5.3e-15 55.5 0.3 1.5 2 0 0 2 2 2 1 Copper resistance protein D DUF2269 PF10027.4 gi|407465696|ref|YP_006776578.1| - 1.6e-05 24.7 5.0 2.2e-05 24.2 3.5 1.1 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2269) UPF0093 PF03653.8 gi|407465696|ref|YP_006776578.1| - 0.00037 20.4 9.2 0.00085 19.2 6.4 1.5 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0093) 7TM_GPCR_Srv PF10323.4 gi|407465696|ref|YP_006776578.1| - 0.011 14.8 2.9 0.011 14.8 2.0 1.8 1 1 1 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srv Ytp1 PF10355.4 gi|407465696|ref|YP_006776578.1| - 0.047 12.8 3.0 0.056 12.6 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (Ytp1) Selenoprotein_S PF06936.6 gi|407465696|ref|YP_006776578.1| - 0.054 13.0 0.1 0.077 12.5 0.1 1.2 1 0 0 1 1 1 0 Selenoprotein S (SelS) DUF989 PF06181.6 gi|407465696|ref|YP_006776578.1| - 0.059 12.4 0.3 0.059 12.4 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF989) DUF4149 PF13664.1 gi|407465696|ref|YP_006776578.1| - 0.11 12.5 7.3 0.057 13.4 2.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4149) Aa_trans PF01490.13 gi|407465696|ref|YP_006776578.1| - 0.15 10.5 10.3 0.0094 14.4 1.9 2.1 1 1 1 2 2 2 0 Transmembrane amino acid transporter protein Cytochrom_C_asm PF01578.15 gi|407465696|ref|YP_006776578.1| - 0.22 11.0 5.0 0.79 9.2 3.5 2.0 1 1 0 1 1 1 0 Cytochrome C assembly protein YrhC PF14143.1 gi|407465696|ref|YP_006776578.1| - 0.25 11.3 1.6 2.4 8.1 0.0 2.7 3 1 0 3 3 3 0 YrhC-like protein DUF3278 PF11683.3 gi|407465696|ref|YP_006776578.1| - 0.71 9.8 6.0 0.64 10.0 3.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3278) p53-inducible11 PF14936.1 gi|407465696|ref|YP_006776578.1| - 0.78 9.6 5.1 0.64 9.9 2.0 2.0 1 1 1 2 2 2 0 Tumour protein p53-inducible protein 11 Brr6_like_C_C PF10104.4 gi|407465696|ref|YP_006776578.1| - 2.1 7.8 9.7 0.061 12.8 1.2 2.4 2 1 0 2 2 2 0 Di-sulfide bridge nucleocytoplasmic transport domain SieB PF14163.1 gi|407465696|ref|YP_006776578.1| - 4.6 6.8 11.5 14 5.1 3.7 2.5 2 1 0 2 2 2 0 Superinfection exclusion protein B DUF2207 PF09972.4 gi|407465696|ref|YP_006776578.1| - 6.3 5.2 8.8 7.4 5.0 2.9 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) LEA_2 PF03168.8 gi|407465697|ref|YP_006776579.1| - 0.028 14.7 0.0 0.078 13.3 0.0 1.9 2 1 0 2 2 2 0 Late embryogenesis abundant protein DUF4382 PF14321.1 gi|407465697|ref|YP_006776579.1| - 0.045 13.8 0.2 0.058 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4382) Nitroreductase PF00881.19 gi|407465698|ref|YP_006776580.1| - 1.1e-27 96.8 0.0 1.5e-27 96.4 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family FMN_red PF03358.10 gi|407465699|ref|YP_006776581.1| - 9.6e-23 80.3 0.0 1.2e-22 79.9 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|407465699|ref|YP_006776581.1| - 1.3e-07 31.2 0.0 1.6e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold DUF1297 PF06973.7 gi|407465699|ref|YP_006776581.1| - 0.066 12.5 0.1 11 5.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1297) Pex24p PF06398.6 gi|407465700|ref|YP_006776582.1| - 0.005 15.6 1.6 0.0063 15.3 1.1 1.1 1 0 0 1 1 1 1 Integral peroxisomal membrane peroxin Kei1 PF08552.6 gi|407465700|ref|YP_006776582.1| - 0.034 13.8 0.4 0.039 13.6 0.3 1.2 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 RmuC PF02646.11 gi|407465700|ref|YP_006776582.1| - 0.06 12.1 7.2 0.065 12.0 4.7 1.3 1 1 0 1 1 1 0 RmuC family Vps53_N PF04100.7 gi|407465700|ref|YP_006776582.1| - 0.07 11.9 7.4 0.083 11.6 5.1 1.1 1 0 0 1 1 1 0 Vps53-like, N-terminal FA_desaturase PF00487.19 gi|407465700|ref|YP_006776582.1| - 0.12 11.7 1.2 0.16 11.3 0.8 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2730 PF10805.3 gi|407465700|ref|YP_006776582.1| - 0.49 10.1 6.6 0.73 9.5 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Reo_sigmaC PF04582.7 gi|407465700|ref|YP_006776582.1| - 0.89 8.6 4.5 1.1 8.3 3.1 1.2 1 0 0 1 1 1 0 Reovirus sigma C capsid protein CheY-binding PF09078.6 gi|407465700|ref|YP_006776582.1| - 1.1 9.3 5.4 1.3 9.1 0.6 2.8 1 1 2 3 3 3 0 CheY binding HTH_23 PF13384.1 gi|407465701|ref|YP_006776583.1| - 0.0048 16.5 0.0 0.008 15.8 0.0 1.6 1 1 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.5 gi|407465701|ref|YP_006776583.1| - 0.026 14.1 0.1 0.22 11.1 0.0 2.0 2 0 0 2 2 2 0 IclR helix-turn-helix domain GntR PF00392.16 gi|407465701|ref|YP_006776583.1| - 0.073 12.5 0.1 0.11 12.0 0.0 1.5 1 1 0 1 1 1 0 Bacterial regulatory proteins, gntR family TrmB PF01978.14 gi|407465701|ref|YP_006776583.1| - 0.13 11.9 0.0 0.37 10.5 0.0 1.7 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB Pro_isomerase PF00160.16 gi|407465702|ref|YP_006776584.1| - 3.9e-49 166.8 0.0 4.6e-49 166.6 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SH3_5 PF08460.5 gi|407465703|ref|YP_006776585.1| - 0.078 12.9 0.0 0.17 11.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial SH3 domain DIPSY PF11763.3 gi|407465703|ref|YP_006776585.1| - 0.15 11.8 1.0 1.5 8.6 0.0 2.3 2 0 0 2 2 2 0 Cell-wall adhesin ligand-binding C-terminal TonB_C PF03544.9 gi|407465703|ref|YP_006776585.1| - 0.22 11.7 0.5 4.4 7.5 0.1 2.4 2 0 0 2 2 2 0 Gram-negative bacterial TonB protein C-terminal zf-CDGSH PF09360.5 gi|407465704|ref|YP_006776586.1| - 0.47 10.3 2.9 0.74 9.7 2.0 1.6 1 1 0 1 1 1 0 Iron-binding zinc finger CDGSH type DUF3795 PF12675.2 gi|407465705|ref|YP_006776587.1| - 0.59 10.3 11.3 0.91 9.7 7.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3795) TF_Zn_Ribbon PF08271.7 gi|407465705|ref|YP_006776587.1| - 1.1 8.6 9.0 3.9 6.8 2.0 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding eIF-5_eIF-2B PF01873.12 gi|407465705|ref|YP_006776587.1| - 1.1 8.8 6.3 0.15 11.7 1.3 1.7 1 1 1 2 2 2 0 Domain found in IF2B/IF5 Cript PF10235.4 gi|407465705|ref|YP_006776587.1| - 1.5 9.2 6.7 0.87 9.9 3.5 1.5 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT DUF2082 PF09855.4 gi|407465705|ref|YP_006776587.1| - 2.5 8.0 13.3 16 5.4 0.8 3.1 1 1 2 3 3 3 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-DNL PF05180.7 gi|407465705|ref|YP_006776587.1| - 4 7.2 11.8 2.2 8.0 3.3 2.9 2 1 0 2 2 2 0 DNL zinc finger zinc_ribbon_4 PF13717.1 gi|407465705|ref|YP_006776587.1| - 7.5 6.3 15.6 3.2 7.5 0.7 3.9 3 1 0 3 3 3 0 zinc-ribbon domain Tap-RNA_bind PF09162.5 gi|407465706|ref|YP_006776588.1| - 0.022 14.2 0.1 0.44 10.1 0.0 2.2 2 0 0 2 2 2 0 Tap, RNA-binding DUF3712 PF12505.3 gi|407465707|ref|YP_006776589.1| - 0.049 13.6 0.1 0.072 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3712) PfkB PF00294.19 gi|407465708|ref|YP_006776590.1| - 3.3e-23 82.2 0.9 1.7e-22 79.9 0.6 1.8 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 gi|407465708|ref|YP_006776590.1| - 1e-05 24.8 0.1 2.1e-05 23.8 0.0 1.5 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.12 gi|407465708|ref|YP_006776590.1| - 0.00085 18.6 0.2 0.28 10.4 0.0 2.4 2 1 0 2 2 2 2 Carbohydrate kinase NGF PF00243.13 gi|407465708|ref|YP_006776590.1| - 0.069 12.8 0.2 0.12 12.1 0.1 1.3 1 0 0 1 1 1 0 Nerve growth factor family dUTPase_2 PF08761.6 gi|407465709|ref|YP_006776591.1| - 3.1e-18 66.4 9.0 5.6e-14 52.5 0.5 2.0 1 1 1 2 2 2 2 dUTPase Reovirus_cap PF00979.12 gi|407465709|ref|YP_006776591.1| - 0.078 11.9 0.1 0.086 11.7 0.0 1.0 1 0 0 1 1 1 0 Reovirus outer capsid protein, Sigma 3 DUF550 PF04447.7 gi|407465709|ref|YP_006776591.1| - 0.079 12.5 1.6 0.28 10.8 1.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF550) MtrA PF04208.9 gi|407465710|ref|YP_006776592.1| - 2.7e-26 92.0 0.1 3.6e-26 91.6 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A DegT_DnrJ_EryC1 PF01041.12 gi|407465711|ref|YP_006776593.1| - 5.4e-116 387.5 0.0 6e-116 387.4 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.16 gi|407465711|ref|YP_006776593.1| - 3.4e-10 39.4 0.0 4.9e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|407465711|ref|YP_006776593.1| - 4.9e-08 32.0 0.2 4.9e-08 32.0 0.1 1.6 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|407465711|ref|YP_006776593.1| - 8.8e-08 30.8 0.1 1.4e-07 30.2 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.16 gi|407465711|ref|YP_006776593.1| - 7.5e-06 25.2 0.1 1.3e-05 24.5 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.15 gi|407465711|ref|YP_006776593.1| - 0.016 13.7 0.1 0.023 13.2 0.1 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain ComK PF06338.6 gi|407465711|ref|YP_006776593.1| - 0.04 13.3 0.0 0.071 12.5 0.0 1.4 1 0 0 1 1 1 0 ComK protein zf-C2H2 PF00096.21 gi|407465713|ref|YP_006776595.1| - 2.7e-08 33.6 7.6 0.001 19.3 0.3 2.1 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.1 gi|407465713|ref|YP_006776595.1| - 4.4e-08 32.9 4.4 0.0035 17.5 0.1 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger TF_Zn_Ribbon PF08271.7 gi|407465713|ref|YP_006776595.1| - 0.00024 20.3 0.3 0.086 12.1 0.0 2.2 2 0 0 2 2 2 1 TFIIB zinc-binding A2L_zn_ribbon PF08792.5 gi|407465713|ref|YP_006776595.1| - 0.00036 19.8 2.0 0.25 10.8 0.0 2.4 2 0 0 2 2 2 2 A2L zinc ribbon domain zinc_ribbon_2 PF13240.1 gi|407465713|ref|YP_006776595.1| - 0.0004 19.7 0.3 0.0011 18.3 0.2 1.8 1 1 0 1 1 1 1 zinc-ribbon domain zf-FPG_IleRS PF06827.9 gi|407465713|ref|YP_006776595.1| - 0.0022 17.5 1.9 0.98 9.1 0.1 2.4 2 0 0 2 2 2 2 Zinc finger found in FPG and IleRS zf-C2H2_6 PF13912.1 gi|407465713|ref|YP_006776595.1| - 0.0023 17.7 1.7 0.0023 17.7 1.2 2.4 2 0 0 2 2 2 1 C2H2-type zinc finger zinc_ribbon_5 PF13719.1 gi|407465713|ref|YP_006776595.1| - 0.0025 17.3 3.8 0.37 10.4 0.1 2.5 2 1 0 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|407465713|ref|YP_006776595.1| - 0.0035 16.5 3.3 0.022 13.9 1.4 2.3 1 1 1 2 2 2 1 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|407465713|ref|YP_006776595.1| - 0.0068 16.0 4.2 0.34 10.6 0.1 2.5 2 1 0 2 2 2 1 zinc-ribbon domain Prok-RING_1 PF14446.1 gi|407465713|ref|YP_006776595.1| - 0.01 15.5 6.0 0.19 11.4 1.3 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 RNA_POL_M_15KD PF02150.11 gi|407465713|ref|YP_006776595.1| - 0.016 14.8 3.4 0.57 9.9 0.4 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf-BED PF02892.10 gi|407465713|ref|YP_006776595.1| - 0.017 14.8 11.3 0.061 13.0 0.9 2.3 1 1 1 2 2 2 0 BED zinc finger Rubredoxin PF00301.15 gi|407465713|ref|YP_006776595.1| - 0.019 14.8 1.6 3.3 7.6 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin DZR PF12773.2 gi|407465713|ref|YP_006776595.1| - 0.024 14.4 5.6 0.043 13.6 3.9 1.6 1 1 0 1 1 1 0 Double zinc ribbon Ribosomal_S27e PF01667.12 gi|407465713|ref|YP_006776595.1| - 0.025 14.1 0.2 0.28 10.7 0.0 2.1 2 0 0 2 2 2 0 Ribosomal protein S27 FYDLN_acid PF09538.5 gi|407465713|ref|YP_006776595.1| - 0.027 15.0 3.3 0.14 12.7 2.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) PHF5 PF03660.9 gi|407465713|ref|YP_006776595.1| - 0.034 14.2 1.3 0.034 14.2 0.9 1.1 1 0 0 1 1 1 0 PHF5-like protein zf-trcl PF13451.1 gi|407465713|ref|YP_006776595.1| - 0.039 13.5 3.0 1.1 8.9 0.1 2.4 2 0 0 2 2 2 0 Probable zinc-binding domain zf-C2H2_2 PF12756.2 gi|407465713|ref|YP_006776595.1| - 0.062 13.4 6.2 1.8 8.7 1.0 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) ADK_lid PF05191.9 gi|407465713|ref|YP_006776595.1| - 0.066 12.8 2.9 4.5 7.0 0.1 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid Yippee-Mis18 PF03226.9 gi|407465713|ref|YP_006776595.1| - 0.085 12.9 2.1 0.27 11.2 1.5 1.8 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly FYVE PF01363.16 gi|407465713|ref|YP_006776595.1| - 0.086 12.7 6.8 0.32 10.9 2.8 2.1 1 1 1 2 2 2 0 FYVE zinc finger RRN7 PF11781.3 gi|407465713|ref|YP_006776595.1| - 0.11 12.0 1.6 1.7 8.2 0.1 2.2 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 UPF0547 PF10571.4 gi|407465713|ref|YP_006776595.1| - 0.11 12.1 5.2 3.2 7.5 0.1 2.4 3 0 0 3 3 2 0 Uncharacterised protein family UPF0547 zf-CHY PF05495.7 gi|407465713|ref|YP_006776595.1| - 0.11 12.6 9.4 0.6 10.3 6.5 1.8 1 1 0 1 1 1 0 CHY zinc finger DNA_RNApol_7kD PF03604.8 gi|407465713|ref|YP_006776595.1| - 0.16 11.4 3.1 1.5 8.3 0.2 2.3 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-HIT PF04438.11 gi|407465713|ref|YP_006776595.1| - 0.18 11.5 4.0 1.8 8.2 0.3 2.3 2 0 0 2 2 2 0 HIT zinc finger zf-Di19 PF05605.7 gi|407465713|ref|YP_006776595.1| - 0.23 11.6 1.8 0.31 11.2 1.2 1.3 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-H2C2_2 PF13465.1 gi|407465713|ref|YP_006776595.1| - 0.27 11.5 13.9 0.85 10.0 2.5 3.1 3 0 0 3 3 3 0 Zinc-finger double domain GFA PF04828.9 gi|407465713|ref|YP_006776595.1| - 0.28 11.1 3.9 0.73 9.8 0.2 2.0 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme PyrI_C PF02748.10 gi|407465713|ref|YP_006776595.1| - 0.28 10.6 5.5 2.3 7.7 0.2 2.2 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Rad50_zn_hook PF04423.9 gi|407465713|ref|YP_006776595.1| - 0.28 10.6 8.1 0.23 10.9 1.7 2.3 1 1 1 2 2 2 0 Rad50 zinc hook motif Desulfoferrod_N PF06397.7 gi|407465713|ref|YP_006776595.1| - 0.33 10.3 2.6 6.3 6.2 0.1 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain C1_1 PF00130.17 gi|407465713|ref|YP_006776595.1| - 0.34 10.6 6.5 2.2 8.0 1.2 2.1 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Rpr2 PF04032.11 gi|407465713|ref|YP_006776595.1| - 0.46 10.3 5.6 0.63 9.9 3.6 1.6 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-Mss51 PF13824.1 gi|407465713|ref|YP_006776595.1| - 0.51 10.2 5.8 1.1 9.2 1.5 2.2 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 RNHCP PF12647.2 gi|407465713|ref|YP_006776595.1| - 0.51 10.1 4.8 3.5 7.5 0.1 2.0 1 1 1 2 2 2 0 RNHCP domain XPA_N PF01286.13 gi|407465713|ref|YP_006776595.1| - 0.54 9.9 4.0 6.3 6.5 0.1 2.3 2 0 0 2 2 2 0 XPA protein N-terminal Fer4_10 PF13237.1 gi|407465713|ref|YP_006776595.1| - 0.56 10.0 3.1 0.74 9.6 2.1 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain GCC2_GCC3 PF07699.8 gi|407465713|ref|YP_006776595.1| - 0.6 9.7 5.6 4.6 6.9 0.0 2.3 2 1 0 2 2 2 0 GCC2 and GCC3 OrfB_Zn_ribbon PF07282.6 gi|407465713|ref|YP_006776595.1| - 0.72 9.5 6.7 10 5.8 0.2 2.1 1 1 1 2 2 2 0 Putative transposase DNA-binding domain C1_2 PF03107.11 gi|407465713|ref|YP_006776595.1| - 0.75 9.9 3.4 3.5 7.8 0.2 2.2 2 0 0 2 2 2 0 C1 domain Zn-ribbon_8 PF09723.5 gi|407465713|ref|YP_006776595.1| - 0.95 9.4 6.6 12 5.9 3.5 2.3 1 1 1 2 2 2 0 Zinc ribbon domain HypA PF01155.14 gi|407465713|ref|YP_006776595.1| - 1.3 8.7 5.4 6.2 6.5 0.8 2.0 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family DUF3795 PF12675.2 gi|407465713|ref|YP_006776595.1| - 1.4 9.1 8.1 1.6 8.9 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3795) zf-C2H2_3 PF13878.1 gi|407465713|ref|YP_006776595.1| - 1.6 8.3 10.1 6 6.5 3.0 2.5 2 1 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO Ribosomal_L37e PF01907.14 gi|407465713|ref|YP_006776595.1| - 1.9 8.3 10.8 6.4 6.6 3.2 2.4 1 1 1 2 2 2 0 Ribosomal protein L37e LIM PF00412.17 gi|407465713|ref|YP_006776595.1| - 2.1 8.4 7.2 2.6 8.1 5.0 1.2 1 0 0 1 1 1 0 LIM domain Fer4 PF00037.22 gi|407465713|ref|YP_006776595.1| - 2.9 7.6 4.8 9.5 6.0 0.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain DUF678 PF05077.7 gi|407465713|ref|YP_006776595.1| - 3.7 7.6 7.4 3.4 7.7 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF678) YyzF PF14116.1 gi|407465713|ref|YP_006776595.1| - 5.8 6.9 7.0 0.4 10.6 0.8 2.0 1 1 1 2 2 2 0 YyzF-like protein DUF479 PF04336.7 gi|407465714|ref|YP_006776596.1| - 0.043 13.9 0.0 0.049 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF479 U3_snoRNA_assoc PF08297.6 gi|407465714|ref|YP_006776596.1| - 0.078 13.2 0.1 0.13 12.5 0.1 1.4 1 1 0 1 1 1 0 U3 snoRNA associated Ribosomal_S5_C PF03719.10 gi|407465714|ref|YP_006776596.1| - 0.081 12.2 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S5, C-terminal domain tRNA-synt_1b PF00579.20 gi|407465715|ref|YP_006776597.1| - 4.6e-41 140.8 0.1 6.1e-41 140.4 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) TP_methylase PF00590.15 gi|407465716|ref|YP_006776598.1| - 1.9e-35 122.4 0.0 2.3e-35 122.2 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases PD40 PF07676.7 gi|407465717|ref|YP_006776599.1| - 0.043 13.5 0.6 13 5.5 0.1 3.6 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat Lipoprotein_15 PF03640.10 gi|407465717|ref|YP_006776599.1| - 0.11 11.9 0.3 22 4.5 0.0 2.8 3 0 0 3 3 3 0 Secreted repeat of unknown function AA_kinase PF00696.23 gi|407465718|ref|YP_006776600.1| - 1.3e-53 182.0 1.0 1.3e-53 182.0 0.7 1.8 2 0 0 2 2 2 1 Amino acid kinase family ACT PF01842.20 gi|407465718|ref|YP_006776600.1| - 4.2e-22 77.2 0.9 4.5e-11 41.9 0.1 2.8 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.1 gi|407465718|ref|YP_006776600.1| - 8.2e-22 76.5 4.8 6.2e-13 48.0 0.2 2.9 2 0 0 2 2 2 2 ACT domain ACT_6 PF13740.1 gi|407465718|ref|YP_006776600.1| - 0.022 14.4 2.4 0.18 11.5 0.0 3.3 4 0 0 4 4 4 0 ACT domain LytR_C PF13399.1 gi|407465718|ref|YP_006776600.1| - 0.035 14.4 1.5 0.34 11.3 0.0 2.9 2 2 1 3 3 3 0 LytR cell envelope-related transcriptional attenuator PEX11 PF05648.9 gi|407465718|ref|YP_006776600.1| - 0.061 12.5 0.6 0.11 11.7 0.4 1.3 1 0 0 1 1 1 0 Peroxisomal biogenesis factor 11 (PEX11) BCDHK_Adom3 PF10436.4 gi|407465718|ref|YP_006776600.1| - 0.15 11.6 0.9 0.34 10.3 0.2 1.9 2 0 0 2 2 2 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase LsmAD PF06741.8 gi|407465718|ref|YP_006776600.1| - 0.25 11.4 1.8 0.55 10.3 1.3 1.5 1 0 0 1 1 1 0 LsmAD domain PCNA_N PF00705.13 gi|407465719|ref|YP_006776601.1| - 1.9e-19 69.3 0.1 3.4e-19 68.6 0.0 1.4 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.10 gi|407465719|ref|YP_006776601.1| - 1e-15 57.8 0.8 1.2e-14 54.3 0.0 2.5 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.8 gi|407465719|ref|YP_006776601.1| - 0.0048 16.0 0.0 0.0063 15.6 0.0 1.2 1 0 0 1 1 1 1 Rad9 Pox_A51 PF04948.8 gi|407465719|ref|YP_006776601.1| - 0.029 13.0 0.5 0.043 12.4 0.2 1.4 1 1 0 1 1 1 0 Poxvirus A51 protein TFIIS_C PF01096.13 gi|407465720|ref|YP_006776602.1| - 3.9e-18 64.8 5.6 3.9e-18 64.8 3.9 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) DZR PF12773.2 gi|407465720|ref|YP_006776602.1| - 3.5e-05 23.5 9.8 0.0062 16.3 1.1 2.3 2 1 0 2 2 2 2 Double zinc ribbon Zn_Tnp_IS1595 PF12760.2 gi|407465720|ref|YP_006776602.1| - 0.00063 19.4 12.0 0.022 14.5 0.9 3.2 2 1 1 3 3 3 2 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|407465720|ref|YP_006776602.1| - 0.00099 18.7 14.0 0.033 13.8 3.6 3.7 3 1 0 3 3 3 1 RNA polymerases M/15 Kd subunit zinc_ribbon_4 PF13717.1 gi|407465720|ref|YP_006776602.1| - 0.0024 17.5 15.4 3 7.6 2.9 4.2 3 1 0 3 3 3 2 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|407465720|ref|YP_006776602.1| - 0.0037 16.7 15.4 2.4 7.8 2.7 4.2 3 1 0 3 3 3 2 zinc-ribbon domain zf-DNA_Pol PF08996.5 gi|407465720|ref|YP_006776602.1| - 0.0042 16.4 3.0 0.01 15.2 0.1 2.1 2 0 0 2 2 2 1 DNA Polymerase alpha zinc finger Elf1 PF05129.8 gi|407465720|ref|YP_006776602.1| - 0.0073 15.9 4.5 0.61 9.8 0.1 2.3 2 0 0 2 2 2 2 Transcription elongation factor Elf1 like zinc-ribbons_6 PF07191.7 gi|407465720|ref|YP_006776602.1| - 0.0076 16.0 0.6 0.0076 16.0 0.4 2.8 2 1 1 3 3 3 1 zinc-ribbons OrfB_Zn_ribbon PF07282.6 gi|407465720|ref|YP_006776602.1| - 0.0081 15.8 13.3 0.062 12.9 1.5 2.8 2 1 0 2 2 2 2 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.1 gi|407465720|ref|YP_006776602.1| - 0.023 13.9 10.7 1 8.6 0.2 3.9 4 0 0 4 4 4 0 zinc-ribbon domain Prok-RING_1 PF14446.1 gi|407465720|ref|YP_006776602.1| - 0.04 13.6 1.2 0.04 13.6 0.8 2.9 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 Terminase_GpA PF05876.7 gi|407465720|ref|YP_006776602.1| - 0.074 11.3 1.3 0.1 10.9 0.9 1.2 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) zinc_ribbon_2 PF13240.1 gi|407465720|ref|YP_006776602.1| - 0.22 11.0 17.9 0.8 9.2 4.9 3.6 3 1 0 3 3 3 0 zinc-ribbon domain zf-NADH-PPase PF09297.6 gi|407465720|ref|YP_006776602.1| - 0.34 10.4 11.3 0.94 9.0 2.5 3.7 3 1 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Lar_restr_allev PF14354.1 gi|407465720|ref|YP_006776602.1| - 0.53 10.6 0.1 0.53 10.6 0.1 3.5 1 1 2 3 3 3 0 Restriction alleviation protein Lar zf-MYND PF01753.13 gi|407465720|ref|YP_006776602.1| - 0.72 9.7 9.2 1.1 9.2 0.7 2.4 2 0 0 2 2 2 0 MYND finger RIG-I_C-RD PF11648.3 gi|407465720|ref|YP_006776602.1| - 0.96 9.3 0.1 0.96 9.3 0.0 2.9 1 1 2 3 3 3 0 C-terminal domain of RIG-I HypA PF01155.14 gi|407465720|ref|YP_006776602.1| - 1.2 8.7 10.3 1.5 8.5 0.8 2.5 2 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Ribosomal_L44 PF00935.14 gi|407465720|ref|YP_006776602.1| - 2 8.4 12.2 5.2 7.1 0.5 3.3 2 1 1 3 3 3 0 Ribosomal protein L44 UPF0547 PF10571.4 gi|407465720|ref|YP_006776602.1| - 3.8 7.2 12.6 14 5.5 0.1 3.8 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 C1_1 PF00130.17 gi|407465720|ref|YP_006776602.1| - 3.9 7.2 14.2 0.6 9.8 1.8 2.7 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DNA_RNApol_7kD PF03604.8 gi|407465720|ref|YP_006776602.1| - 4.7 6.7 13.7 8.7 5.9 0.1 3.3 3 1 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit Baculo_ME53 PF06061.6 gi|407465720|ref|YP_006776602.1| - 5.8 5.8 11.2 0.3 10.0 1.4 2.5 1 1 2 3 3 3 0 Baculoviridae ME53 PHD PF00628.24 gi|407465720|ref|YP_006776602.1| - 7.2 6.3 13.0 7.9 6.2 1.0 2.7 2 1 0 2 2 2 0 PHD-finger DUF3795 PF12675.2 gi|407465720|ref|YP_006776602.1| - 7.7 6.7 9.1 1.9 8.7 3.1 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3795) Rpr2 PF04032.11 gi|407465720|ref|YP_006776602.1| - 7.7 6.4 7.4 45 4.0 3.2 2.7 2 1 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain RNA_pol_L_2 PF13656.1 gi|407465721|ref|YP_006776603.1| - 1.8e-18 65.7 0.1 2.1e-18 65.5 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain VWA_2 PF13519.1 gi|407465724|ref|YP_006776606.1| - 1.3e-35 122.9 0.1 1.7e-35 122.6 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.23 gi|407465724|ref|YP_006776606.1| - 9.5e-27 93.8 0.4 1.6e-26 93.1 0.3 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain BatA PF07584.6 gi|407465724|ref|YP_006776606.1| - 8.7e-09 35.4 0.0 1.7e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Aerotolerance regulator N-terminal VWA_3 PF13768.1 gi|407465724|ref|YP_006776606.1| - 6.5e-05 22.6 0.0 0.0002 21.0 0.0 1.9 1 1 0 1 1 1 1 von Willebrand factor type A domain DUF1194 PF06707.6 gi|407465724|ref|YP_006776606.1| - 0.00033 19.6 0.0 0.0088 15.0 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1194) VWA_CoxE PF05762.9 gi|407465724|ref|YP_006776606.1| - 0.0041 16.2 0.0 0.012 14.8 0.0 1.6 1 1 0 1 1 1 1 VWA domain containing CoxE-like protein Ssl1 PF04056.9 gi|407465724|ref|YP_006776606.1| - 0.0073 15.9 0.0 0.021 14.3 0.0 1.6 2 0 0 2 2 2 1 Ssl1-like vWA-TerF-like PF10138.4 gi|407465724|ref|YP_006776606.1| - 0.0082 15.9 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 1 vWA found in TerF C terminus SRX PF09201.5 gi|407465724|ref|YP_006776606.1| - 0.045 13.3 0.3 0.13 11.9 0.0 1.8 2 0 0 2 2 2 0 SRX CobT_C PF11775.3 gi|407465724|ref|YP_006776606.1| - 0.067 12.6 0.0 0.4 10.0 0.0 1.9 1 1 1 2 2 2 0 Cobalamin biosynthesis protein CobT VWA domain ETRAMP PF09716.5 gi|407465724|ref|YP_006776606.1| - 7.3 6.6 8.6 1.7 8.6 2.4 2.4 2 1 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) DUF58 PF01882.13 gi|407465725|ref|YP_006776607.1| - 2.2e-23 82.2 0.0 4.3e-23 81.2 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.1 gi|407465725|ref|YP_006776607.1| - 3.6e-05 23.9 0.0 4.6e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.1 gi|407465725|ref|YP_006776607.1| - 0.0017 18.0 0.0 0.0026 17.4 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|407465725|ref|YP_006776607.1| - 0.03 13.4 0.0 0.086 11.9 0.0 1.7 1 1 0 1 1 1 0 VWA domain containing CoxE-like protein AAA_3 PF07726.6 gi|407465726|ref|YP_006776608.1| - 1.2e-64 215.7 0.1 2.2e-64 214.9 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|407465726|ref|YP_006776608.1| - 1.7e-14 53.6 0.0 6.1e-14 51.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.21 gi|407465726|ref|YP_006776608.1| - 3.2e-06 26.7 0.0 9.9e-06 25.1 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain MCM PF00493.18 gi|407465726|ref|YP_006776608.1| - 1.6e-05 23.8 0.4 0.0064 15.3 0.0 2.4 2 1 0 2 2 2 2 MCM2/3/5 family RuvB_N PF05496.7 gi|407465726|ref|YP_006776608.1| - 5.3e-05 22.3 0.3 0.00033 19.7 0.2 2.2 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Mg_chelatase PF01078.16 gi|407465726|ref|YP_006776608.1| - 0.00023 20.3 0.2 0.028 13.5 0.0 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA PF00004.24 gi|407465726|ref|YP_006776608.1| - 0.00042 20.5 0.0 0.00086 19.5 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|407465726|ref|YP_006776608.1| - 0.011 15.7 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain DSPc PF00782.15 gi|407465729|ref|YP_006776611.1| - 5.7e-18 64.7 0.0 7.3e-18 64.4 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.22 gi|407465729|ref|YP_006776611.1| - 3.2e-09 36.4 0.0 6.5e-09 35.4 0.0 1.5 1 1 1 2 2 2 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.1 gi|407465729|ref|YP_006776611.1| - 7.3e-08 32.5 0.0 9.8e-08 32.1 0.0 1.3 1 0 0 1 1 1 1 Inositol hexakisphosphate CDKN3 PF05706.7 gi|407465729|ref|YP_006776611.1| - 0.00038 19.9 0.0 0.00053 19.4 0.0 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase2 PF03162.8 gi|407465729|ref|YP_006776611.1| - 0.001 18.4 0.0 0.0016 17.8 0.0 1.3 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase3 PF13350.1 gi|407465729|ref|YP_006776611.1| - 0.0027 17.9 0.2 0.0081 16.4 0.1 1.7 1 1 1 2 2 2 1 Tyrosine phosphatase family Cyclase PF04199.8 gi|407465730|ref|YP_006776612.1| - 1.6e-33 115.7 0.0 1.9e-33 115.5 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase AsnC_trans_reg PF01037.16 gi|407465731|ref|YP_006776613.1| - 9.1e-08 31.7 0.1 1.1e-07 31.4 0.1 1.2 1 0 0 1 1 1 1 AsnC family Lsr2 PF11774.3 gi|407465731|ref|YP_006776613.1| - 0.0026 17.6 0.0 0.0029 17.5 0.0 1.1 1 0 0 1 1 1 1 Lsr2 KH_5 PF13184.1 gi|407465731|ref|YP_006776613.1| - 0.092 12.5 1.6 0.94 9.3 0.1 2.1 2 0 0 2 2 2 0 NusA-like KH domain Aminotran_5 PF00266.14 gi|407465732|ref|YP_006776614.1| - 1.4e-72 244.5 0.0 1.6e-72 244.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|407465732|ref|YP_006776614.1| - 1.4e-07 30.8 0.0 2.2e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|407465732|ref|YP_006776614.1| - 0.0028 16.8 0.0 0.0038 16.4 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase YgbB PF02542.11 gi|407465732|ref|YP_006776614.1| - 0.016 15.0 0.1 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 YgbB family DUF261 PF03196.8 gi|407465733|ref|YP_006776615.1| - 0.007 16.3 1.8 0.013 15.5 0.2 1.9 1 1 1 2 2 2 1 Protein of unknown function, DUF261 MIF4G PF02854.14 gi|407465733|ref|YP_006776615.1| - 0.011 15.1 0.8 0.017 14.5 0.5 1.5 1 0 0 1 1 1 0 MIF4G domain Na_sulph_symp PF00939.14 gi|407465733|ref|YP_006776615.1| - 0.13 11.0 0.0 0.17 10.7 0.0 1.1 1 0 0 1 1 1 0 Sodium:sulfate symporter transmembrane region Fer4 PF00037.22 gi|407465734|ref|YP_006776616.1| - 1.7e-11 43.2 10.5 4.3e-07 29.2 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|407465734|ref|YP_006776616.1| - 1e-09 38.6 3.7 1.5e-09 38.1 2.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|407465734|ref|YP_006776616.1| - 1.6e-09 37.2 8.6 3.7e-05 23.4 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|407465734|ref|YP_006776616.1| - 9.5e-08 31.7 3.3 1.6e-07 31.0 2.3 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|407465734|ref|YP_006776616.1| - 9.7e-08 31.7 1.6 1.4e-07 31.2 1.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|407465734|ref|YP_006776616.1| - 2.6e-07 30.1 8.9 0.0032 17.2 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|407465734|ref|YP_006776616.1| - 1.6e-05 25.0 8.2 0.00017 21.7 5.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|407465734|ref|YP_006776616.1| - 1.8e-05 24.7 7.8 0.03 14.6 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|407465734|ref|YP_006776616.1| - 6.3e-05 23.6 1.0 0.17 12.6 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|407465734|ref|YP_006776616.1| - 7.7e-05 22.9 12.3 0.043 14.3 2.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|407465734|ref|YP_006776616.1| - 8.6e-05 22.8 5.2 0.14 12.5 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|407465734|ref|YP_006776616.1| - 0.0002 21.3 3.9 0.00055 19.9 2.8 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|407465734|ref|YP_006776616.1| - 0.00024 21.5 9.6 0.012 16.1 0.7 2.7 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|407465734|ref|YP_006776616.1| - 0.00057 20.2 6.2 0.041 14.3 1.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|407465734|ref|YP_006776616.1| - 0.0026 18.0 5.6 0.056 13.7 3.8 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Copper-bind PF00127.15 gi|407465735|ref|YP_006776617.1| - 1.9e-07 31.1 0.0 3.6e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 gi|407465735|ref|YP_006776617.1| - 0.0036 17.1 0.0 0.29 11.0 0.0 3.3 2 1 0 2 2 2 1 Cupredoxin-like domain Slp PF03843.8 gi|407465735|ref|YP_006776617.1| - 0.0086 15.0 0.0 0.02 13.9 0.0 1.6 1 0 0 1 1 1 1 Outer membrane lipoprotein Slp family HAMP PF00672.20 gi|407465736|ref|YP_006776618.1| - 2.6e-16 59.5 1.7 3.5e-16 59.1 0.0 2.1 2 0 0 2 2 2 1 HAMP domain Guanylate_cyc PF00211.15 gi|407465736|ref|YP_006776618.1| - 1.2e-15 57.4 0.3 2.3e-15 56.4 0.2 1.5 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain DUF1611 PF07755.6 gi|407465737|ref|YP_006776619.1| - 0.12 10.9 0.0 0.14 10.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1611) Ammonium_transp PF00909.16 gi|407465738|ref|YP_006776620.1| - 5.2e-116 387.4 32.7 5.9e-116 387.2 22.7 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.17 gi|407465739|ref|YP_006776621.1| - 3.9e-14 52.9 0.5 4.6e-14 52.7 0.3 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II P-II PF00543.17 gi|407465740|ref|YP_006776622.1| - 1e-09 38.7 0.3 1.8e-09 37.9 0.2 1.4 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DnaJ PF00226.26 gi|407465741|ref|YP_006776623.1| - 1.1e-11 44.2 0.1 3e-11 42.8 0.0 1.8 2 0 0 2 2 2 1 DnaJ domain Aha1_N PF09229.6 gi|407465741|ref|YP_006776623.1| - 0.038 13.8 1.7 0.16 11.7 0.1 2.5 2 1 0 2 2 2 0 Activator of Hsp90 ATPase, N-terminal DUF2345 PF10106.4 gi|407465741|ref|YP_006776623.1| - 0.15 11.6 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2345) KIAA1430 PF13879.1 gi|407465741|ref|YP_006776623.1| - 0.19 12.1 2.6 0.2 12.1 0.7 1.9 2 0 0 2 2 2 0 KIAA1430 homologue DUF3519 PF12033.3 gi|407465741|ref|YP_006776623.1| - 0.64 10.2 4.4 4.2 7.6 0.2 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3519) Usp PF00582.21 gi|407465742|ref|YP_006776624.1| - 4.3e-31 107.9 0.0 5.2e-31 107.7 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family CBS PF00571.23 gi|407465743|ref|YP_006776625.1| - 4e-41 138.5 0.9 5.9e-13 48.3 0.0 4.1 4 0 0 4 4 4 4 CBS domain Sigma54_DBD PF04552.8 gi|407465743|ref|YP_006776625.1| - 0.014 14.8 0.6 0.035 13.6 0.0 1.8 2 1 0 2 2 2 0 Sigma-54, DNA binding domain RVT_3 PF13456.1 gi|407465743|ref|YP_006776625.1| - 0.14 12.0 0.1 0.35 10.6 0.0 1.7 2 0 0 2 2 2 0 Reverse transcriptase-like VIT1 PF01988.14 gi|407465744|ref|YP_006776626.1| - 8.8e-64 214.8 0.9 9.9e-64 214.7 0.6 1.0 1 0 0 1 1 1 1 VIT family AA_permease_2 PF13520.1 gi|407465745|ref|YP_006776627.1| - 6.2e-54 183.1 55.7 7.6e-54 182.8 38.6 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|407465745|ref|YP_006776627.1| - 7.5e-43 146.5 51.9 9.6e-43 146.2 36.0 1.2 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.8 gi|407465745|ref|YP_006776627.1| - 6.3e-08 31.6 30.6 6.3e-08 31.6 21.2 2.7 1 1 1 2 2 2 1 Spore germination protein Na_H_Exchanger PF00999.16 gi|407465746|ref|YP_006776628.1| - 5.7e-54 183.1 53.2 6.8e-54 182.8 36.9 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Gln-synt_C PF00120.19 gi|407465748|ref|YP_006776630.1| - 2.6e-86 288.9 0.0 3.3e-86 288.6 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|407465748|ref|YP_006776630.1| - 2.4e-23 81.4 0.1 4.7e-23 80.5 0.1 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Fer4_14 PF13394.1 gi|407465749|ref|YP_006776631.1| - 2.4e-06 27.5 0.0 7.3e-06 26.0 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|407465749|ref|YP_006776631.1| - 2.3e-05 24.6 0.0 5.6e-05 23.3 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|407465749|ref|YP_006776631.1| - 0.00028 21.0 0.0 0.00067 19.7 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain MS_channel PF00924.13 gi|407465750|ref|YP_006776632.1| - 5e-32 110.9 0.3 1e-31 109.8 0.2 1.6 1 0 0 1 1 1 1 Mechanosensitive ion channel PepSY_TM_2 PF13703.1 gi|407465750|ref|YP_006776632.1| - 0.017 15.3 0.9 0.017 15.3 0.6 2.3 2 0 0 2 2 2 0 PepSY-associated TM helix DUF1129 PF06570.6 gi|407465750|ref|YP_006776632.1| - 0.49 9.6 5.2 0.095 11.9 0.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) Pribosyltran_N PF13793.1 gi|407465751|ref|YP_006776633.1| - 1.1e-24 86.3 0.9 1.4e-23 82.7 0.1 2.3 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.22 gi|407465751|ref|YP_006776633.1| - 3.1e-16 59.2 0.4 1.7e-15 56.8 0.0 2.2 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.1 gi|407465751|ref|YP_006776633.1| - 1.9e-12 47.2 6.0 3.4e-12 46.4 0.6 3.1 2 2 1 3 3 3 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.1 gi|407465751|ref|YP_006776633.1| - 2.6e-06 26.8 0.1 4.6e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|407465751|ref|YP_006776633.1| - 0.00032 20.0 0.1 0.00061 19.1 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase SRI PF08236.6 gi|407465751|ref|YP_006776633.1| - 0.016 15.1 3.1 2.9 7.8 0.2 2.5 2 0 0 2 2 2 0 SRI (Set2 Rpb1 interacting) domain Asp_Glu_race PF01177.17 gi|407465751|ref|YP_006776633.1| - 0.046 13.6 0.1 0.087 12.7 0.0 1.5 2 0 0 2 2 2 0 Asp/Glu/Hydantoin racemase UPF0020 PF01170.13 gi|407465752|ref|YP_006776634.1| - 2.6e-25 89.0 0.0 4.9e-25 88.1 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_26 PF13659.1 gi|407465752|ref|YP_006776634.1| - 6.3e-16 58.4 0.0 1e-15 57.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|407465752|ref|YP_006776634.1| - 3.1e-13 49.5 0.0 7e-13 48.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.13 gi|407465752|ref|YP_006776634.1| - 1.6e-12 47.3 0.0 2.5e-11 43.4 0.0 2.2 2 1 0 2 2 2 1 DNA methylase Methyltransf_18 PF12847.2 gi|407465752|ref|YP_006776634.1| - 7.4e-06 26.5 0.0 1.5e-05 25.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.11 gi|407465752|ref|YP_006776634.1| - 1.1e-05 24.7 0.3 3.8e-05 22.9 0.0 2.0 3 0 0 3 3 3 1 N-6 DNA Methylase Cons_hypoth95 PF03602.10 gi|407465752|ref|YP_006776634.1| - 1.2e-05 24.7 0.0 2.1e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_25 PF13649.1 gi|407465752|ref|YP_006776634.1| - 2.4e-05 24.6 0.0 5.7e-05 23.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|407465752|ref|YP_006776634.1| - 3.8e-05 22.9 0.0 8.6e-05 21.7 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.9 gi|407465752|ref|YP_006776634.1| - 0.00012 21.5 0.0 0.00021 20.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain THUMP PF02926.12 gi|407465752|ref|YP_006776634.1| - 0.00038 20.3 0.4 0.002 18.0 0.2 2.2 1 1 0 1 1 1 1 THUMP domain Met_10 PF02475.11 gi|407465752|ref|YP_006776634.1| - 0.0004 20.0 0.0 0.00092 18.8 0.0 1.5 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_11 PF08241.7 gi|407465752|ref|YP_006776634.1| - 0.0021 18.5 0.0 0.0041 17.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|407465752|ref|YP_006776634.1| - 0.0038 16.3 0.0 0.007 15.4 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MethyltransfD12 PF02086.10 gi|407465752|ref|YP_006776634.1| - 0.0039 16.6 0.0 0.012 15.0 0.0 1.9 1 1 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_5 PF01795.14 gi|407465752|ref|YP_006776634.1| - 0.0066 15.7 0.0 0.011 14.9 0.0 1.4 1 0 0 1 1 1 1 MraW methylase family Methyltransf_15 PF09445.5 gi|407465752|ref|YP_006776634.1| - 0.0087 15.6 0.0 0.025 14.1 0.0 1.9 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Ubie_methyltran PF01209.13 gi|407465752|ref|YP_006776634.1| - 0.011 14.9 0.0 0.021 13.9 0.0 1.5 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|407465752|ref|YP_006776634.1| - 0.024 15.0 0.0 0.058 13.8 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.14 gi|407465752|ref|YP_006776634.1| - 0.044 13.3 0.0 0.072 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.1 gi|407465752|ref|YP_006776634.1| - 0.079 12.6 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Lactamase_B_2 PF12706.2 gi|407465753|ref|YP_006776635.1| - 5.1e-24 84.8 0.0 6.9e-24 84.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|407465753|ref|YP_006776635.1| - 1.5e-05 24.7 0.0 0.00018 21.2 0.0 2.3 2 1 1 3 3 3 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.1 gi|407465753|ref|YP_006776635.1| - 0.063 12.7 0.0 0.14 11.6 0.0 1.6 1 0 0 1 1 1 0 tRNase Z endonuclease SIR2 PF02146.12 gi|407465754|ref|YP_006776636.1| - 4.5e-53 179.6 0.0 6e-53 179.2 0.0 1.2 1 0 0 1 1 1 1 Sir2 family TPP_enzyme_M PF00205.17 gi|407465754|ref|YP_006776636.1| - 0.0044 16.7 0.0 0.037 13.7 0.0 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain RNA_POL_M_15KD PF02150.11 gi|407465754|ref|YP_006776636.1| - 0.01 15.5 0.7 0.47 10.1 0.0 2.6 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit ISG65-75 PF11727.3 gi|407465755|ref|YP_006776637.1| - 0.034 13.1 0.1 0.046 12.7 0.1 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein Phasin PF05597.6 gi|407465755|ref|YP_006776637.1| - 0.091 12.5 0.3 0.16 11.7 0.2 1.4 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) RNA_binding PF01877.12 gi|407465756|ref|YP_006776638.1| - 7.3e-16 58.2 0.1 1.3e-15 57.4 0.1 1.4 1 1 0 1 1 1 1 RNA binding DUF2340 PF10209.4 gi|407465756|ref|YP_006776638.1| - 0.028 14.5 0.4 0.044 13.9 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2340) Cep57_CLD PF14073.1 gi|407465756|ref|YP_006776638.1| - 0.037 13.8 0.1 0.044 13.5 0.1 1.2 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 DUF3634 PF12321.3 gi|407465756|ref|YP_006776638.1| - 0.052 13.4 0.0 0.081 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3634) 5-nucleotidase PF06189.7 gi|407465756|ref|YP_006776638.1| - 0.059 12.1 0.0 0.069 11.9 0.0 1.1 1 0 0 1 1 1 0 5'-nucleotidase RWD PF05773.17 gi|407465756|ref|YP_006776638.1| - 0.11 12.4 0.8 0.18 11.7 0.6 1.6 1 1 0 1 1 1 0 RWD domain AAA_18 PF13238.1 gi|407465757|ref|YP_006776639.1| - 3.2e-14 53.3 0.2 4.3e-14 52.9 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|407465757|ref|YP_006776639.1| - 1.3e-10 42.1 0.0 1.8e-10 41.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|407465757|ref|YP_006776639.1| - 5e-05 23.1 0.1 0.00018 21.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|407465757|ref|YP_006776639.1| - 0.0012 18.8 0.0 0.0018 18.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|407465757|ref|YP_006776639.1| - 0.0028 16.4 0.4 0.0046 15.7 0.1 1.5 2 0 0 2 2 2 1 ArgK protein CoaE PF01121.15 gi|407465757|ref|YP_006776639.1| - 0.0045 16.3 0.0 0.0088 15.4 0.0 1.5 1 1 0 1 1 1 1 Dephospho-CoA kinase AAA_29 PF13555.1 gi|407465757|ref|YP_006776639.1| - 0.0046 16.4 0.2 0.0087 15.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain APS_kinase PF01583.15 gi|407465757|ref|YP_006776639.1| - 0.0065 16.1 0.0 0.02 14.5 0.0 1.8 2 0 0 2 2 2 1 Adenylylsulphate kinase ADK PF00406.17 gi|407465757|ref|YP_006776639.1| - 0.011 15.6 0.1 0.015 15.1 0.0 1.3 1 0 0 1 1 1 0 Adenylate kinase AAA_22 PF13401.1 gi|407465757|ref|YP_006776639.1| - 0.013 15.6 0.1 0.022 14.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.10 gi|407465757|ref|YP_006776639.1| - 0.019 14.6 0.4 0.3 10.7 0.1 2.2 1 1 1 2 2 2 0 NTPase KTI12 PF08433.5 gi|407465757|ref|YP_006776639.1| - 0.024 13.8 0.0 0.032 13.4 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA PF00004.24 gi|407465757|ref|YP_006776639.1| - 0.026 14.7 0.2 0.064 13.4 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Cytidylate_kin2 PF13189.1 gi|407465757|ref|YP_006776639.1| - 0.044 13.6 0.2 4.7 7.0 0.0 2.2 2 0 0 2 2 2 0 Cytidylate kinase-like family AAA_14 PF13173.1 gi|407465757|ref|YP_006776639.1| - 0.048 13.5 0.0 0.089 12.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|407465757|ref|YP_006776639.1| - 0.057 12.2 0.2 0.095 11.5 0.2 1.3 1 0 0 1 1 1 0 NB-ARC domain Zeta_toxin PF06414.7 gi|407465757|ref|YP_006776639.1| - 0.073 12.1 0.1 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_19 PF13245.1 gi|407465757|ref|YP_006776639.1| - 0.12 12.1 0.2 0.25 11.1 0.2 1.5 1 0 0 1 1 1 0 Part of AAA domain AAA_16 PF13191.1 gi|407465757|ref|YP_006776639.1| - 0.14 12.0 0.1 0.31 10.9 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.1 gi|407465757|ref|YP_006776639.1| - 0.16 12.2 3.9 0.38 11.0 2.7 1.8 1 1 0 1 1 1 0 AAA domain LigT_PEase PF02834.11 gi|407465758|ref|YP_006776640.1| - 1.7e-24 85.5 0.0 3.1e-14 52.6 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase AKAP7_NLS PF10469.4 gi|407465758|ref|YP_006776640.1| - 1e-13 51.4 0.0 1.7e-13 50.7 0.0 1.3 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain 2_5_RNA_ligase2 PF13563.1 gi|407465758|ref|YP_006776640.1| - 2.8e-08 33.6 0.0 3.1e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily tRNA_NucTransf2 PF09249.6 gi|407465759|ref|YP_006776641.1| - 1.2e-38 131.4 0.1 3.3e-38 130.0 0.1 1.8 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.18 gi|407465759|ref|YP_006776641.1| - 8.9e-09 35.5 0.8 7.7e-08 32.5 0.3 2.4 2 0 0 2 2 2 1 Nucleotidyltransferase domain DUF1436 PF07262.6 gi|407465759|ref|YP_006776641.1| - 0.0014 18.1 1.2 0.023 14.1 0.0 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1436) RIO1 PF01163.17 gi|407465760|ref|YP_006776642.1| - 2.9e-07 30.0 0.3 5.8e-07 29.0 0.0 1.7 2 1 0 2 2 2 1 RIO1 family Pkinase PF00069.20 gi|407465760|ref|YP_006776642.1| - 3.3e-06 26.4 1.3 4.5e-06 26.0 0.6 1.6 1 1 0 1 1 1 1 Protein kinase domain Choline_kinase PF01633.15 gi|407465760|ref|YP_006776642.1| - 1.6e-05 24.5 0.2 4.6e-05 23.0 0.1 1.9 1 1 0 1 1 1 1 Choline/ethanolamine kinase ALS_ss_C PF10369.4 gi|407465760|ref|YP_006776642.1| - 0.013 15.2 0.2 1 9.1 0.0 3.1 2 1 0 2 2 2 0 Small subunit of acetolactate synthase APH PF01636.18 gi|407465760|ref|YP_006776642.1| - 0.021 14.5 0.0 0.06 13.0 0.0 1.7 1 1 1 2 2 2 0 Phosphotransferase enzyme family LRR_8 PF13855.1 gi|407465760|ref|YP_006776642.1| - 0.074 12.8 0.1 0.25 11.1 0.0 1.9 1 0 0 1 1 1 0 Leucine rich repeat Pyr_redox_2 PF07992.9 gi|407465762|ref|YP_006776644.1| - 1e-18 67.9 0.0 1.7e-18 67.2 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|407465762|ref|YP_006776644.1| - 2.2e-06 27.9 0.1 0.0021 18.4 0.0 2.7 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|407465762|ref|YP_006776644.1| - 0.00093 19.1 0.0 0.0017 18.3 0.0 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.9 gi|407465762|ref|YP_006776644.1| - 0.0028 16.3 0.0 0.0042 15.7 0.0 1.2 1 0 0 1 1 1 1 Tryptophan halogenase DAO PF01266.19 gi|407465762|ref|YP_006776644.1| - 0.0039 16.1 0.0 0.0098 14.8 0.0 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.1 gi|407465762|ref|YP_006776644.1| - 0.0047 16.7 0.0 0.016 14.9 0.0 1.8 2 0 0 2 2 2 1 FAD-NAD(P)-binding FAD_binding_2 PF00890.19 gi|407465762|ref|YP_006776644.1| - 0.0063 15.4 0.0 0.22 10.3 0.0 2.1 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.14 gi|407465762|ref|YP_006776644.1| - 0.1 11.6 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain adh_short PF00106.20 gi|407465763|ref|YP_006776645.1| - 1.4e-35 122.6 0.1 2e-35 122.1 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|407465763|ref|YP_006776645.1| - 2.7e-19 69.9 1.0 3.4e-19 69.5 0.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|407465763|ref|YP_006776645.1| - 2.2e-13 50.2 0.1 3e-13 49.8 0.1 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.1 gi|407465763|ref|YP_006776645.1| - 0.00012 22.1 0.8 0.00029 20.8 0.6 1.6 1 1 0 1 1 1 1 NADH(P)-binding Eno-Rase_NADH_b PF12242.3 gi|407465763|ref|YP_006776645.1| - 0.0008 19.1 2.4 0.0018 18.0 0.9 2.0 2 1 0 2 2 2 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Epimerase PF01370.16 gi|407465763|ref|YP_006776645.1| - 0.0035 16.7 0.1 0.041 13.2 0.0 2.1 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family zf-AN1 PF01428.11 gi|407465764|ref|YP_006776646.1| - 4.5e-13 48.8 5.8 5.8e-13 48.4 4.0 1.1 1 0 0 1 1 1 1 AN1-like Zinc finger UPF1_Zn_bind PF09416.5 gi|407465764|ref|YP_006776646.1| - 0.096 12.2 1.3 0.11 12.1 0.9 1.2 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) RecR PF02132.10 gi|407465764|ref|YP_006776646.1| - 0.097 12.1 1.5 0.18 11.2 1.1 1.4 1 0 0 1 1 1 0 RecR protein Transp_Tc5_C PF04236.10 gi|407465764|ref|YP_006776646.1| - 1.4 9.2 5.5 10 6.4 3.8 2.1 1 1 0 1 1 1 0 Tc5 transposase C-terminal domain zf-B_box PF00643.19 gi|407465764|ref|YP_006776646.1| - 4.8 7.1 8.3 8.1 6.4 5.8 1.5 1 1 0 1 1 1 0 B-box zinc finger PyrI_C PF02748.10 gi|407465764|ref|YP_006776646.1| - 9.6 5.7 8.0 6.2 6.3 0.5 2.3 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain CLN6 PF15156.1 gi|407465765|ref|YP_006776647.1| - 0.0075 15.4 0.6 0.0086 15.2 0.4 1.1 1 0 0 1 1 1 1 Ceroid-lipofuscinosis neuronal protein 6 EmrE PF13536.1 gi|407465765|ref|YP_006776647.1| - 0.012 15.8 4.8 0.016 15.3 3.3 1.2 1 0 0 1 1 1 0 Multidrug resistance efflux transporter B12D PF06522.6 gi|407465765|ref|YP_006776647.1| - 0.057 13.1 0.6 0.1 12.3 0.0 1.7 2 0 0 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Hemagglutinin PF00509.13 gi|407465766|ref|YP_006776648.1| - 0.24 9.4 2.0 0.31 9.1 1.4 1.1 1 0 0 1 1 1 0 Haemagglutinin Gln-synt_C PF00120.19 gi|407465767|ref|YP_006776649.1| - 4.2e-87 291.5 0.0 5.4e-87 291.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|407465767|ref|YP_006776649.1| - 8.8e-25 86.1 0.0 1.8e-24 85.0 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain DUF3042 PF11240.3 gi|407465768|ref|YP_006776650.1| - 0.07 12.9 0.6 0.12 12.1 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3042) RDD PF06271.7 gi|407465768|ref|YP_006776650.1| - 2.9 7.7 9.2 0.26 11.2 1.5 1.9 1 1 1 2 2 2 0 RDD family YfhO PF09586.5 gi|407465768|ref|YP_006776650.1| - 4 5.3 7.8 4.4 5.2 5.4 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Cpn60_TCP1 PF00118.19 gi|407465769|ref|YP_006776651.1| - 1.6e-164 548.0 18.4 1.9e-164 547.9 12.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Ustilago_mating PF05722.7 gi|407465769|ref|YP_006776651.1| - 0.076 12.3 0.0 0.16 11.2 0.0 1.5 1 0 0 1 1 1 0 Ustilago B locus mating-type protein SHMT PF00464.14 gi|407465770|ref|YP_006776652.1| - 3e-78 262.9 0.0 4e-78 262.5 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.16 gi|407465770|ref|YP_006776652.1| - 8.1e-08 31.6 0.1 4.5e-07 29.1 0.1 2.1 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|407465770|ref|YP_006776652.1| - 4.2e-06 26.1 0.0 6.1e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase SelA PF03841.8 gi|407465770|ref|YP_006776652.1| - 9.5e-05 21.2 0.0 0.00018 20.3 0.0 1.4 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.14 gi|407465770|ref|YP_006776652.1| - 0.00017 20.4 0.1 0.00032 19.5 0.1 1.6 1 1 0 1 1 1 1 Aminotransferase class-V Pyridoxal_deC PF00282.14 gi|407465770|ref|YP_006776652.1| - 0.0071 14.8 0.0 0.012 14.0 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain PcrB PF01884.12 gi|407465771|ref|YP_006776653.1| - 7.3e-66 221.7 0.1 8.8e-66 221.4 0.1 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.16 gi|407465771|ref|YP_006776653.1| - 9.6e-08 31.5 0.2 6.1e-07 28.9 0.0 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein IMPDH PF00478.20 gi|407465771|ref|YP_006776653.1| - 4.5e-06 25.7 0.6 2.9e-05 23.1 0.2 1.9 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain Trp_syntA PF00290.15 gi|407465771|ref|YP_006776653.1| - 0.00083 17.9 1.7 0.0068 14.9 0.1 2.5 2 1 1 3 3 3 1 Tryptophan synthase alpha chain IGPS PF00218.16 gi|407465771|ref|YP_006776653.1| - 0.0021 17.1 0.1 0.057 12.4 0.0 2.5 3 0 0 3 3 3 1 Indole-3-glycerol phosphate synthase B12-binding PF02310.14 gi|407465771|ref|YP_006776653.1| - 0.0028 17.5 0.2 2.4 8.0 0.0 3.2 3 0 0 3 3 3 1 B12 binding domain BtpA PF03437.10 gi|407465771|ref|YP_006776653.1| - 0.0028 16.9 1.4 0.13 11.5 0.2 2.2 2 0 0 2 2 2 1 BtpA family NanE PF04131.9 gi|407465771|ref|YP_006776653.1| - 0.0066 15.4 0.4 0.55 9.1 0.1 2.3 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase Ribul_P_3_epim PF00834.14 gi|407465771|ref|YP_006776653.1| - 0.0081 15.2 0.2 0.031 13.3 0.0 1.8 2 0 0 2 2 2 1 Ribulose-phosphate 3 epimerase family ThiG PF05690.9 gi|407465771|ref|YP_006776653.1| - 0.017 14.2 0.9 0.96 8.4 0.0 2.2 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG NMO PF03060.10 gi|407465771|ref|YP_006776653.1| - 0.02 14.0 0.6 0.18 10.9 0.1 2.0 2 0 0 2 2 2 0 Nitronate monooxygenase TMP-TENI PF02581.12 gi|407465771|ref|YP_006776653.1| - 0.024 13.7 0.1 0.25 10.4 0.0 2.1 2 0 0 2 2 2 0 Thiamine monophosphate synthase/TENI Peripla_BP_1 PF00532.16 gi|407465771|ref|YP_006776653.1| - 0.066 12.4 0.2 0.57 9.3 0.0 2.1 2 0 0 2 2 2 0 Periplasmic binding proteins and sugar binding domain of LacI family G3P_antiterm PF04309.7 gi|407465771|ref|YP_006776653.1| - 0.25 10.3 2.6 0.79 8.7 0.1 2.4 2 1 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator YwpF PF14183.1 gi|407465772|ref|YP_006776654.1| - 0.046 13.4 0.1 0.1 12.2 0.0 1.6 2 0 0 2 2 2 0 YwpF-like protein FliH PF02108.11 gi|407465772|ref|YP_006776654.1| - 0.076 12.8 0.0 0.18 11.6 0.0 1.6 2 0 0 2 2 2 0 Flagellar assembly protein FliH HTH_27 PF13463.1 gi|407465773|ref|YP_006776655.1| - 5e-06 26.7 0.1 8.4e-06 26.0 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|407465773|ref|YP_006776655.1| - 5.7e-05 22.7 1.2 0.00015 21.4 0.1 2.1 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|407465773|ref|YP_006776655.1| - 0.0039 17.1 0.5 0.0079 16.2 0.1 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain DUF3116 PF11313.3 gi|407465773|ref|YP_006776655.1| - 0.0081 15.7 0.1 0.016 14.7 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3116) Replic_Relax PF13814.1 gi|407465773|ref|YP_006776655.1| - 0.014 15.2 0.1 0.023 14.5 0.0 1.3 1 0 0 1 1 1 0 Replication-relaxation HTH_24 PF13412.1 gi|407465773|ref|YP_006776655.1| - 0.014 14.7 0.0 0.026 13.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_45 PF14947.1 gi|407465773|ref|YP_006776655.1| - 0.064 13.0 0.5 0.16 11.7 0.2 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix Rrf2 PF02082.15 gi|407465773|ref|YP_006776655.1| - 0.073 13.2 0.4 0.78 9.8 0.0 2.2 2 0 0 2 2 2 0 Transcriptional regulator Penicillinase_R PF03965.11 gi|407465773|ref|YP_006776655.1| - 0.11 12.6 1.6 0.3 11.1 0.2 2.1 2 0 0 2 2 2 0 Penicillinase repressor MarR PF01047.17 gi|407465773|ref|YP_006776655.1| - 0.23 11.2 0.2 0.23 11.2 0.2 1.7 2 0 0 2 2 2 0 MarR family Antitoxin-MazE PF04014.13 gi|407465774|ref|YP_006776656.1| - 5.1e-07 29.2 0.1 6.2e-07 29.0 0.1 1.1 1 0 0 1 1 1 1 Antidote-toxin recognition MazE MraZ PF02381.13 gi|407465774|ref|YP_006776656.1| - 0.088 12.5 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 MraZ protein eIF-1a PF01176.14 gi|407465774|ref|YP_006776656.1| - 0.09 12.2 0.1 0.14 11.6 0.1 1.6 1 1 0 1 1 1 0 Translation initiation factor 1A / IF-1 Penicillinase_R PF03965.11 gi|407465775|ref|YP_006776657.1| - 0.00064 19.7 0.0 0.00096 19.2 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor PqqD PF05402.7 gi|407465775|ref|YP_006776657.1| - 0.078 13.0 0.0 0.097 12.7 0.0 1.3 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) Cdc6_C PF09079.6 gi|407465776|ref|YP_006776658.1| - 1.6e-19 69.4 0.4 4e-19 68.1 0.3 1.6 1 0 0 1 1 1 1 CDC6, C terminal AAA_22 PF13401.1 gi|407465776|ref|YP_006776658.1| - 7.4e-12 45.5 0.7 2.2e-11 44.0 0.1 2.0 2 1 0 2 2 2 1 AAA domain AAA PF00004.24 gi|407465776|ref|YP_006776658.1| - 1.3e-09 38.4 0.7 9.7e-09 35.5 0.5 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|407465776|ref|YP_006776658.1| - 1.3e-09 38.3 0.3 5.2e-09 36.3 0.0 2.1 2 1 0 2 2 2 1 AAA ATPase domain NACHT PF05729.7 gi|407465776|ref|YP_006776658.1| - 1.5e-06 27.9 0.0 2.3e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 NACHT domain Arch_ATPase PF01637.13 gi|407465776|ref|YP_006776658.1| - 2.1e-05 24.3 2.5 2.1e-05 24.3 1.8 2.2 2 1 0 2 2 2 1 Archaeal ATPase DUF2075 PF09848.4 gi|407465776|ref|YP_006776658.1| - 5.8e-05 22.2 0.2 7.4e-05 21.8 0.1 1.3 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) NB-ARC PF00931.17 gi|407465776|ref|YP_006776658.1| - 0.00011 21.1 0.1 0.00022 20.2 0.1 1.5 1 0 0 1 1 1 1 NB-ARC domain AAA_5 PF07728.9 gi|407465776|ref|YP_006776658.1| - 0.00011 21.8 0.2 0.00042 20.0 0.1 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) PIF1 PF05970.9 gi|407465776|ref|YP_006776658.1| - 0.00046 19.2 0.0 0.001 18.1 0.0 1.5 1 0 0 1 1 1 1 PIF1-like helicase TrwB_AAD_bind PF10412.4 gi|407465776|ref|YP_006776658.1| - 0.00089 17.9 0.1 0.0089 14.6 0.0 2.1 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_32 PF13654.1 gi|407465776|ref|YP_006776658.1| - 0.0017 17.1 0.3 0.11 11.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.8 gi|407465776|ref|YP_006776658.1| - 0.002 17.1 0.0 0.0041 16.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) T2SE PF00437.15 gi|407465776|ref|YP_006776658.1| - 0.0028 16.6 0.0 0.0062 15.4 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_19 PF13245.1 gi|407465776|ref|YP_006776658.1| - 0.0037 16.9 0.0 0.011 15.4 0.0 1.8 1 0 0 1 1 1 1 Part of AAA domain RNA_helicase PF00910.17 gi|407465776|ref|YP_006776658.1| - 0.005 17.0 0.0 0.014 15.5 0.0 1.8 1 0 0 1 1 1 1 RNA helicase AAA_24 PF13479.1 gi|407465776|ref|YP_006776658.1| - 0.0063 16.1 0.0 0.017 14.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.16 gi|407465776|ref|YP_006776658.1| - 0.014 14.5 0.0 0.038 13.1 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_11 PF13086.1 gi|407465776|ref|YP_006776658.1| - 0.015 14.8 2.8 0.054 13.0 1.9 1.9 1 1 0 1 1 1 0 AAA domain ResIII PF04851.10 gi|407465776|ref|YP_006776658.1| - 0.017 14.9 1.7 0.12 12.1 0.0 2.7 3 1 0 3 3 3 0 Type III restriction enzyme, res subunit KAP_NTPase PF07693.9 gi|407465776|ref|YP_006776658.1| - 0.021 13.8 3.4 0.63 8.9 0.0 2.5 2 1 0 3 3 3 0 KAP family P-loop domain UvrD-helicase PF00580.16 gi|407465776|ref|YP_006776658.1| - 0.033 13.4 0.6 0.71 9.1 0.0 2.2 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain KaiC PF06745.8 gi|407465776|ref|YP_006776658.1| - 0.039 13.0 1.5 0.27 10.2 0.0 2.7 2 2 0 2 2 2 0 KaiC NTPase_1 PF03266.10 gi|407465776|ref|YP_006776658.1| - 0.049 13.3 2.0 0.45 10.2 1.4 2.4 1 1 0 1 1 1 0 NTPase ORC5_C PF14630.1 gi|407465776|ref|YP_006776658.1| - 0.094 12.1 0.4 1.3 8.3 0.0 2.6 3 0 0 3 3 3 0 Origin recognition complex (ORC) subunit 5 C-terminus AAA_17 PF13207.1 gi|407465776|ref|YP_006776658.1| - 0.13 13.0 0.6 0.4 11.4 0.3 2.0 1 1 0 1 1 1 0 AAA domain DNA_pol_E_B PF04042.11 gi|407465777|ref|YP_006776659.1| - 3.3e-22 78.7 0.0 5.9e-22 77.9 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.2 gi|407465777|ref|YP_006776659.1| - 8.5e-11 41.9 0.0 1.5e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|407465777|ref|YP_006776659.1| - 1.3e-06 27.9 0.0 2.5e-06 27.0 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase tRNA_anti-codon PF01336.20 gi|407465777|ref|YP_006776659.1| - 0.0024 17.7 0.0 0.0054 16.5 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF95 PF01944.12 gi|407465778|ref|YP_006776660.1| - 5.8e-06 26.0 13.0 7.1e-06 25.7 9.0 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF95 TP_methylase PF00590.15 gi|407465780|ref|YP_006776662.1| - 3.8e-39 134.5 0.0 4.3e-39 134.4 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases bPH_3 PF14470.1 gi|407465781|ref|YP_006776663.1| - 1.3e-05 25.3 0.4 0.038 14.2 0.0 2.6 2 1 0 2 2 2 2 Bacterial PH domain Rtt106 PF08512.7 gi|407465781|ref|YP_006776663.1| - 0.13 12.2 0.4 2.4 8.1 0.0 2.4 3 0 0 3 3 3 0 Histone chaperone Rttp106-like Pro_isomerase PF00160.16 gi|407465782|ref|YP_006776664.1| - 3e-46 157.4 0.1 4.9e-46 156.7 0.1 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PsbP PF01789.11 gi|407465782|ref|YP_006776664.1| - 0.024 14.0 0.1 0.17 11.3 0.0 2.1 1 1 0 1 1 1 0 PsbP Pyr_redox_2 PF07992.9 gi|407465783|ref|YP_006776665.1| - 2.2e-20 73.4 0.0 1.2e-19 70.9 0.0 2.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|407465783|ref|YP_006776665.1| - 8e-19 67.8 0.2 3.3e-12 46.6 0.0 3.4 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|407465783|ref|YP_006776665.1| - 0.00011 21.2 0.4 4.2 6.1 0.0 3.9 3 1 1 4 4 4 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 gi|407465783|ref|YP_006776665.1| - 0.0013 18.8 0.0 0.079 13.0 0.0 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|407465783|ref|YP_006776665.1| - 0.0042 16.0 0.1 1.4 7.6 0.0 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A NAD_binding_9 PF13454.1 gi|407465783|ref|YP_006776665.1| - 0.033 13.9 0.2 29 4.4 0.0 3.5 4 0 0 4 4 4 0 FAD-NAD(P)-binding Lycopene_cycl PF05834.7 gi|407465783|ref|YP_006776665.1| - 0.038 12.9 0.0 3.6 6.4 0.0 2.5 2 1 1 3 3 3 0 Lycopene cyclase protein NAD_binding_8 PF13450.1 gi|407465783|ref|YP_006776665.1| - 0.074 13.0 0.0 8.3 6.5 0.0 2.5 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain ACT_7 PF13840.1 gi|407465784|ref|YP_006776666.1| - 0.00018 20.9 0.1 0.00032 20.1 0.1 1.4 1 0 0 1 1 1 1 ACT domain SecD-TM1 PF13721.1 gi|407465784|ref|YP_006776666.1| - 0.038 14.2 0.1 0.26 11.5 0.0 2.0 2 0 0 2 2 2 0 SecD export protein N-terminal TM region HSP20 PF00011.16 gi|407465785|ref|YP_006776667.1| - 2.9e-08 33.5 6.6 3.9e-07 29.8 4.6 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family PIH1 PF08190.7 gi|407465785|ref|YP_006776667.1| - 0.023 14.1 0.1 0.026 13.9 0.1 1.1 1 0 0 1 1 1 0 pre-RNA processing PIH1/Nop17 CS PF04969.11 gi|407465785|ref|YP_006776667.1| - 0.052 14.1 2.1 0.079 13.5 1.5 1.2 1 0 0 1 1 1 0 CS domain TGF_beta_GS PF08515.7 gi|407465785|ref|YP_006776667.1| - 0.079 12.3 0.1 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Transforming growth factor beta type I GS-motif ALAD PF00490.16 gi|407465785|ref|YP_006776667.1| - 0.15 10.9 1.0 0.19 10.5 0.7 1.1 1 0 0 1 1 1 0 Delta-aminolevulinic acid dehydratase AAA PF00004.24 gi|407465786|ref|YP_006776668.1| - 2.8e-100 331.7 0.0 5.6e-50 168.9 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|407465786|ref|YP_006776668.1| - 2.5e-22 78.6 0.0 8.4e-22 76.9 0.0 2.0 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.9 gi|407465786|ref|YP_006776668.1| - 3.3e-17 62.9 0.1 5.4e-08 32.9 0.0 2.8 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.1 gi|407465786|ref|YP_006776668.1| - 1e-14 54.9 0.0 1.2e-06 28.6 0.0 3.2 2 1 1 3 3 3 2 AAA ATPase domain RuvB_N PF05496.7 gi|407465786|ref|YP_006776668.1| - 1.3e-14 53.8 0.0 4.4e-08 32.4 0.0 2.7 3 0 0 3 3 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_17 PF13207.1 gi|407465786|ref|YP_006776668.1| - 4.7e-14 53.2 0.1 1.9e-05 25.4 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.9 gi|407465786|ref|YP_006776668.1| - 5.6e-14 52.0 1.1 5.6e-06 26.1 0.1 3.8 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|407465786|ref|YP_006776668.1| - 5.7e-13 49.1 1.8 0.00094 19.3 0.2 4.4 2 2 0 2 2 2 2 AAA domain Zeta_toxin PF06414.7 gi|407465786|ref|YP_006776668.1| - 2e-11 43.3 0.0 0.00019 20.5 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_14 PF13173.1 gi|407465786|ref|YP_006776668.1| - 2.1e-11 43.8 0.0 5.6e-05 23.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain CDC48_2 PF02933.12 gi|407465786|ref|YP_006776668.1| - 5.9e-11 41.8 0.1 1.4e-10 40.6 0.1 1.7 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 TIP49 PF06068.8 gi|407465786|ref|YP_006776668.1| - 2.4e-10 39.7 0.1 0.0003 19.6 0.0 2.5 2 0 0 2 2 2 2 TIP49 C-terminus AAA_33 PF13671.1 gi|407465786|ref|YP_006776668.1| - 3.2e-10 40.0 0.0 0.00015 21.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.1 gi|407465786|ref|YP_006776668.1| - 2.9e-09 36.5 1.2 0.0028 17.3 0.0 3.2 3 0 0 3 3 2 2 Part of AAA domain AAA_18 PF13238.1 gi|407465786|ref|YP_006776668.1| - 4.9e-09 36.5 0.1 0.00029 21.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.12 gi|407465786|ref|YP_006776668.1| - 6.6e-09 35.4 0.1 0.0036 16.7 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein Mg_chelatase PF01078.16 gi|407465786|ref|YP_006776668.1| - 1.7e-07 30.5 0.9 0.014 14.5 0.1 2.7 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.21 gi|407465786|ref|YP_006776668.1| - 2.6e-07 30.2 0.4 0.12 11.8 0.0 4.2 2 2 0 2 2 2 2 Sigma-54 interaction domain RNA_helicase PF00910.17 gi|407465786|ref|YP_006776668.1| - 1e-06 28.8 0.0 0.054 13.6 0.0 2.7 2 0 0 2 2 2 2 RNA helicase AAA_3 PF07726.6 gi|407465786|ref|YP_006776668.1| - 2.4e-06 27.1 0.0 0.022 14.3 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.1 gi|407465786|ref|YP_006776668.1| - 3.3e-06 27.1 0.1 0.09 12.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.22 gi|407465786|ref|YP_006776668.1| - 4.8e-06 26.9 0.0 0.19 12.0 0.0 2.8 2 0 0 2 2 2 2 ABC transporter AAA_25 PF13481.1 gi|407465786|ref|YP_006776668.1| - 8.6e-06 25.2 6.5 0.31 10.4 0.2 4.4 2 2 2 4 4 4 2 AAA domain DUF815 PF05673.8 gi|407465786|ref|YP_006776668.1| - 1.5e-05 24.1 0.0 0.15 11.0 0.0 2.6 3 0 0 3 3 2 2 Protein of unknown function (DUF815) Sigma54_activ_2 PF14532.1 gi|407465786|ref|YP_006776668.1| - 2e-05 24.6 0.0 0.16 12.0 0.0 2.8 2 0 0 2 2 2 2 Sigma-54 interaction domain NACHT PF05729.7 gi|407465786|ref|YP_006776668.1| - 2.3e-05 24.0 0.9 1.6 8.3 0.0 4.1 3 1 1 4 4 4 1 NACHT domain PhoH PF02562.11 gi|407465786|ref|YP_006776668.1| - 3.1e-05 23.3 0.2 0.27 10.4 0.1 2.8 2 0 0 2 2 2 2 PhoH-like protein AAA_11 PF13086.1 gi|407465786|ref|YP_006776668.1| - 4.6e-05 23.0 0.1 0.1 12.1 0.0 2.6 2 2 0 2 2 2 2 AAA domain AAA_24 PF13479.1 gi|407465786|ref|YP_006776668.1| - 5.7e-05 22.7 2.8 0.025 14.1 0.3 3.1 2 1 1 3 3 3 1 AAA domain Parvo_NS1 PF01057.12 gi|407465786|ref|YP_006776668.1| - 7.5e-05 21.7 0.1 0.15 10.8 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 SKI PF01202.17 gi|407465786|ref|YP_006776668.1| - 0.0002 21.2 0.0 0.65 9.8 0.0 2.8 2 0 0 2 2 2 2 Shikimate kinase Arch_ATPase PF01637.13 gi|407465786|ref|YP_006776668.1| - 0.00027 20.7 0.1 0.055 13.1 0.0 3.4 2 2 1 3 3 3 1 Archaeal ATPase DUF2075 PF09848.4 gi|407465786|ref|YP_006776668.1| - 0.00034 19.7 0.1 0.44 9.4 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) ResIII PF04851.10 gi|407465786|ref|YP_006776668.1| - 0.00034 20.4 0.0 0.061 13.1 0.0 2.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_30 PF13604.1 gi|407465786|ref|YP_006776668.1| - 0.00037 20.1 0.8 0.22 11.0 0.0 2.9 3 0 0 3 3 2 1 AAA domain NTPase_1 PF03266.10 gi|407465786|ref|YP_006776668.1| - 0.00047 19.9 2.4 1.6 8.4 0.0 4.3 3 1 1 4 4 4 1 NTPase NB-ARC PF00931.17 gi|407465786|ref|YP_006776668.1| - 0.00073 18.4 0.1 0.9 8.3 0.0 2.6 2 0 0 2 2 2 2 NB-ARC domain KaiC PF06745.8 gi|407465786|ref|YP_006776668.1| - 0.0017 17.5 5.4 0.36 9.8 0.0 3.8 3 1 1 4 4 3 2 KaiC T2SE PF00437.15 gi|407465786|ref|YP_006776668.1| - 0.0018 17.2 0.0 1.7 7.4 0.0 2.7 2 0 0 2 2 2 2 Type II/IV secretion system protein UPF0079 PF02367.12 gi|407465786|ref|YP_006776668.1| - 0.0025 17.4 0.2 1.9 8.1 0.0 2.7 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 ATP-synt_ab PF00006.20 gi|407465786|ref|YP_006776668.1| - 0.0033 16.9 0.0 0.57 9.6 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain CPT PF07931.7 gi|407465786|ref|YP_006776668.1| - 0.0053 16.4 0.1 0.23 11.0 0.0 2.6 2 1 1 3 3 2 1 Chloramphenicol phosphotransferase-like protein KTI12 PF08433.5 gi|407465786|ref|YP_006776668.1| - 0.011 14.9 0.3 2.3 7.3 0.0 3.1 3 0 0 3 3 2 0 Chromatin associated protein KTI12 Viral_helicase1 PF01443.13 gi|407465786|ref|YP_006776668.1| - 0.015 14.8 0.0 0.16 11.5 0.0 2.5 3 0 0 3 3 2 0 Viral (Superfamily 1) RNA helicase Guanylate_kin PF00625.16 gi|407465786|ref|YP_006776668.1| - 0.021 14.2 0.8 13 5.1 0.0 4.0 3 1 1 4 4 4 0 Guanylate kinase Bac_DnaA PF00308.13 gi|407465786|ref|YP_006776668.1| - 0.022 14.3 0.0 2.1 7.9 0.0 2.9 2 1 0 2 2 2 0 Bacterial dnaA protein PIF1 PF05970.9 gi|407465786|ref|YP_006776668.1| - 0.022 13.6 0.0 2.5 6.9 0.0 2.8 3 0 0 3 3 2 0 PIF1-like helicase IPT PF01745.11 gi|407465786|ref|YP_006776668.1| - 0.03 13.4 0.3 4.7 6.3 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase Vps4_C PF09336.5 gi|407465786|ref|YP_006776668.1| - 0.034 14.0 0.5 3.5 7.5 0.0 3.0 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain Torsin PF06309.6 gi|407465786|ref|YP_006776668.1| - 0.045 13.6 0.1 2.2 8.1 0.0 2.8 2 0 0 2 2 2 0 Torsin AFG1_ATPase PF03969.11 gi|407465786|ref|YP_006776668.1| - 0.076 11.7 0.0 6.1 5.5 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase DUF258 PF03193.11 gi|407465786|ref|YP_006776668.1| - 0.12 11.5 0.0 3.4 6.8 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function, DUF258 PPV_E1_C PF00519.12 gi|407465786|ref|YP_006776668.1| - 0.19 10.3 0.0 3.7 6.0 0.0 2.1 2 0 0 2 2 2 0 Papillomavirus helicase AAA_23 PF13476.1 gi|407465786|ref|YP_006776668.1| - 2.2 8.5 9.3 5.9 7.1 0.3 3.8 2 1 1 3 3 3 0 AAA domain Evr1_Alr PF04777.8 gi|407465787|ref|YP_006776669.1| - 0.0042 16.9 0.0 0.0042 16.9 0.0 1.1 1 0 0 1 1 1 1 Erv1 / Alr family dCMP_cyt_deam_1 PF00383.17 gi|407465787|ref|YP_006776669.1| - 0.047 13.3 0.0 0.075 12.6 0.0 1.4 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region XOO_2897-deam PF14440.1 gi|407465787|ref|YP_006776669.1| - 0.07 12.8 0.4 0.093 12.4 0.2 1.4 1 1 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase Pox_vIL-18BP PF05566.7 gi|407465787|ref|YP_006776669.1| - 0.076 13.0 0.0 0.085 12.8 0.0 1.1 1 0 0 1 1 1 0 Orthopoxvirus interleukin 18 binding protein IncA PF04156.9 gi|407465788|ref|YP_006776670.1| - 2.3e-05 24.1 0.4 2.3e-05 24.0 0.3 1.2 1 0 0 1 1 1 1 IncA protein Orthopox_A5L PF06193.6 gi|407465788|ref|YP_006776670.1| - 3.3e-05 23.8 0.8 3.8e-05 23.6 0.5 1.1 1 0 0 1 1 1 1 Orthopoxvirus A5L protein-like APG6 PF04111.7 gi|407465788|ref|YP_006776670.1| - 7e-05 22.0 2.2 8.3e-05 21.7 1.5 1.1 1 0 0 1 1 1 1 Autophagy protein Apg6 ATG16 PF08614.6 gi|407465788|ref|YP_006776670.1| - 7.2e-05 22.6 1.1 9.6e-05 22.2 0.7 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DivIC PF04977.10 gi|407465788|ref|YP_006776670.1| - 0.0003 20.2 5.0 0.0003 20.2 3.5 2.2 1 1 1 2 2 2 1 Septum formation initiator HOOK PF05622.7 gi|407465788|ref|YP_006776670.1| - 0.00031 18.7 3.0 0.00039 18.3 2.1 1.0 1 0 0 1 1 1 1 HOOK protein Spc7 PF08317.6 gi|407465788|ref|YP_006776670.1| - 0.00034 19.3 8.4 0.0004 19.1 5.8 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein HALZ PF02183.13 gi|407465788|ref|YP_006776670.1| - 0.00041 19.9 6.2 0.004 16.8 1.1 2.3 1 1 1 2 2 2 2 Homeobox associated leucine zipper CENP-Q PF13094.1 gi|407465788|ref|YP_006776670.1| - 0.00061 19.8 1.5 0.0008 19.4 1.0 1.1 1 0 0 1 1 1 1 CENP-Q, a CENPA-CAD centromere complex subunit ADIP PF11559.3 gi|407465788|ref|YP_006776670.1| - 0.00065 19.6 8.1 0.00085 19.2 5.6 1.2 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Leu_zip PF15294.1 gi|407465788|ref|YP_006776670.1| - 0.0007 18.7 8.1 0.0009 18.4 5.6 1.0 1 0 0 1 1 1 1 Leucine zipper BRE1 PF08647.6 gi|407465788|ref|YP_006776670.1| - 0.0012 18.8 8.1 0.0016 18.3 5.6 1.2 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase HAP1_N PF04849.8 gi|407465788|ref|YP_006776670.1| - 0.0025 16.8 1.4 0.0031 16.5 1.0 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region DUF4164 PF13747.1 gi|407465788|ref|YP_006776670.1| - 0.0026 17.8 6.2 0.0062 16.6 4.2 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) Tropomyosin_1 PF12718.2 gi|407465788|ref|YP_006776670.1| - 0.0038 17.0 8.2 0.0054 16.5 5.7 1.1 1 0 0 1 1 1 1 Tropomyosin like bZIP_2 PF07716.10 gi|407465788|ref|YP_006776670.1| - 0.0088 15.8 7.6 0.2 11.5 0.7 2.4 1 1 2 3 3 3 2 Basic region leucine zipper bZIP_1 PF00170.16 gi|407465788|ref|YP_006776670.1| - 0.013 15.4 8.5 0.09 12.7 2.4 2.2 1 1 1 2 2 2 0 bZIP transcription factor CASP_C PF08172.7 gi|407465788|ref|YP_006776670.1| - 0.016 14.2 0.4 0.02 13.9 0.3 1.2 1 0 0 1 1 1 0 CASP C terminal UPF0449 PF15136.1 gi|407465788|ref|YP_006776670.1| - 0.017 15.3 0.4 0.037 14.2 0.1 1.7 2 0 0 2 2 1 0 Uncharacterised protein family UPF0449 Spc24 PF08286.6 gi|407465788|ref|YP_006776670.1| - 0.021 14.5 5.0 0.029 14.0 3.4 1.3 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 V_ATPase_I PF01496.14 gi|407465788|ref|YP_006776670.1| - 0.021 12.7 0.5 0.023 12.6 0.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Filament PF00038.16 gi|407465788|ref|YP_006776670.1| - 0.027 13.9 4.4 0.033 13.6 3.0 1.1 1 0 0 1 1 1 0 Intermediate filament protein TBPIP PF07106.8 gi|407465788|ref|YP_006776670.1| - 0.033 13.7 8.3 0.044 13.3 5.7 1.1 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) BLOC1_2 PF10046.4 gi|407465788|ref|YP_006776670.1| - 0.035 14.2 9.6 0.051 13.7 6.6 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Microtub_assoc PF07989.6 gi|407465788|ref|YP_006776670.1| - 0.036 13.8 5.2 0.061 13.1 3.6 1.4 1 0 0 1 1 1 0 Microtubule associated DUF904 PF06005.7 gi|407465788|ref|YP_006776670.1| - 0.04 14.2 3.8 0.04 14.2 2.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF904) Uso1_p115_C PF04871.8 gi|407465788|ref|YP_006776670.1| - 0.053 13.4 4.4 0.072 13.0 3.0 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF972 PF06156.8 gi|407465788|ref|YP_006776670.1| - 0.061 13.6 4.4 0.099 13.0 3.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF972) DUF3450 PF11932.3 gi|407465788|ref|YP_006776670.1| - 0.066 12.4 4.9 0.093 11.9 3.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) COG5 PF10392.4 gi|407465788|ref|YP_006776670.1| - 0.091 12.7 3.6 0.16 11.9 2.5 1.3 1 0 0 1 1 1 0 Golgi transport complex subunit 5 TMF_DNA_bd PF12329.3 gi|407465788|ref|YP_006776670.1| - 0.098 12.4 12.9 0.15 11.8 8.9 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Laminin_II PF06009.7 gi|407465788|ref|YP_006776670.1| - 0.13 12.0 4.3 0.17 11.6 3.0 1.1 1 0 0 1 1 1 0 Laminin Domain II CCDC155 PF14662.1 gi|407465788|ref|YP_006776670.1| - 0.18 11.3 8.1 0.28 10.7 5.6 1.2 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 RTBV_P46 PF06216.6 gi|407465788|ref|YP_006776670.1| - 0.26 10.1 2.0 0.31 9.8 1.4 1.1 1 0 0 1 1 1 0 Rice tungro bacilliform virus P46 protein Ax_dynein_light PF10211.4 gi|407465788|ref|YP_006776670.1| - 0.27 11.0 7.1 0.39 10.5 4.9 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain Nsp1_C PF05064.8 gi|407465788|ref|YP_006776670.1| - 0.32 10.6 6.1 0.48 10.0 4.2 1.2 1 0 0 1 1 1 0 Nsp1-like C-terminal region DivIVA PF05103.8 gi|407465788|ref|YP_006776670.1| - 0.34 10.9 6.2 0.67 9.9 4.3 1.4 1 1 0 1 1 1 0 DivIVA protein CENP-H PF05837.7 gi|407465788|ref|YP_006776670.1| - 0.38 10.9 7.5 0.58 10.3 5.2 1.3 1 0 0 1 1 1 0 Centromere protein H (CENP-H) GrpE PF01025.14 gi|407465788|ref|YP_006776670.1| - 0.41 10.1 4.4 0.56 9.7 3.1 1.2 1 0 0 1 1 1 0 GrpE DUF342 PF03961.8 gi|407465788|ref|YP_006776670.1| - 0.42 8.9 5.7 0.5 8.7 4.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF342) Pox_A_type_inc PF04508.7 gi|407465788|ref|YP_006776670.1| - 0.53 10.2 6.1 17 5.5 0.0 3.7 3 1 1 4 4 4 0 Viral A-type inclusion protein repeat DUF2312 PF10073.4 gi|407465788|ref|YP_006776670.1| - 0.61 9.4 3.1 1.3 8.3 0.3 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) DUF2205 PF10224.4 gi|407465788|ref|YP_006776670.1| - 0.72 9.4 7.8 2.6 7.6 0.5 2.3 1 1 1 2 2 2 0 Predicted coiled-coil protein (DUF2205) Tnp_P_element PF12017.3 gi|407465788|ref|YP_006776670.1| - 0.78 8.9 3.7 1.1 8.4 2.5 1.2 1 0 0 1 1 1 0 Transposase protein Atg14 PF10186.4 gi|407465788|ref|YP_006776670.1| - 0.82 8.5 6.9 1 8.2 4.8 1.1 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 CALCOCO1 PF07888.6 gi|407465788|ref|YP_006776670.1| - 0.91 7.7 7.3 1.1 7.4 5.1 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like DUF4200 PF13863.1 gi|407465788|ref|YP_006776670.1| - 1.1 9.2 9.2 6.2 6.7 6.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) PmbA_TldD PF01523.11 gi|407465788|ref|YP_006776670.1| - 1.1 8.4 4.3 1.4 8.1 2.7 1.3 1 1 0 1 1 1 0 Putative modulator of DNA gyrase GLE1 PF07817.8 gi|407465788|ref|YP_006776670.1| - 1.3 7.9 4.2 1.5 7.6 2.9 1.1 1 0 0 1 1 1 0 GLE1-like protein FlaC_arch PF05377.6 gi|407465788|ref|YP_006776670.1| - 1.7 8.6 7.3 7.3 6.5 5.0 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF1664 PF07889.7 gi|407465788|ref|YP_006776670.1| - 1.7 8.4 4.4 2.5 7.9 3.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) XhlA PF10779.4 gi|407465788|ref|YP_006776670.1| - 2.1 8.3 7.7 3.5 7.6 5.3 1.4 1 0 0 1 1 1 0 Haemolysin XhlA Lipoprotein_20 PF13942.1 gi|407465788|ref|YP_006776670.1| - 2.1 7.8 6.4 2.8 7.4 4.4 1.1 1 0 0 1 1 1 0 YfhG lipoprotein EMP24_GP25L PF01105.19 gi|407465788|ref|YP_006776670.1| - 6.4 6.4 8.5 2.5 7.7 3.5 1.9 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD Shugoshin_N PF07558.6 gi|407465788|ref|YP_006776670.1| - 8.3 6.2 11.8 23 4.8 1.6 3.0 2 1 1 3 3 3 0 Shugoshin N-terminal coiled-coil region TSC22 PF01166.13 gi|407465788|ref|YP_006776670.1| - 8.9 6.3 9.9 11 6.0 1.6 2.7 1 1 1 2 2 2 0 TSC-22/dip/bun family TFIIB PF00382.14 gi|407465789|ref|YP_006776671.1| - 1.8e-32 110.9 2.5 2.7e-16 59.1 0.1 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|407465789|ref|YP_006776671.1| - 1.2e-05 24.5 0.2 3.1e-05 23.1 0.1 1.7 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.18 gi|407465789|ref|YP_006776671.1| - 4.4e-05 23.0 0.2 0.054 13.0 0.0 2.4 1 1 1 2 2 2 2 Cyclin, N-terminal domain HTH_11 PF08279.7 gi|407465789|ref|YP_006776671.1| - 0.0034 16.9 0.7 3 7.5 0.0 2.7 2 0 0 2 2 2 2 HTH domain DUF208 PF02677.9 gi|407465789|ref|YP_006776671.1| - 0.0064 16.2 0.8 0.019 14.7 0.1 2.0 2 0 0 2 2 2 1 Uncharacterized BCR, COG1636 DUF1059 PF06348.6 gi|407465790|ref|YP_006776672.1| - 1.2e-05 25.0 0.1 1.8e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) HTH_33 PF13592.1 gi|407465790|ref|YP_006776672.1| - 0.031 13.8 0.0 0.037 13.5 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn helix Sin3_corepress PF08295.7 gi|407465790|ref|YP_006776672.1| - 0.096 12.4 0.5 0.89 9.3 0.1 1.9 1 1 1 2 2 2 0 Sin3 family co-repressor CRCB PF02537.10 gi|407465791|ref|YP_006776673.1| - 5.2e-22 77.9 8.2 5.9e-22 77.7 5.7 1.0 1 0 0 1 1 1 1 CrcB-like protein DUF2104 PF09877.4 gi|407465791|ref|YP_006776673.1| - 0.053 13.4 1.9 0.063 13.2 0.6 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2104) GRAB PF10375.4 gi|407465792|ref|YP_006776674.1| - 0.15 11.8 1.5 0.15 11.8 1.1 1.9 2 0 0 2 2 2 0 GRIP-related Arf-binding domain Lyase_8_C PF02884.12 gi|407465792|ref|YP_006776674.1| - 0.16 12.0 0.2 0.19 11.7 0.1 1.2 1 1 0 1 1 1 0 Polysaccharide lyase family 8, C-terminal beta-sandwich domain PTS_EIIC PF02378.13 gi|407465793|ref|YP_006776675.1| - 0.067 11.9 0.1 0.079 11.7 0.0 1.0 1 0 0 1 1 1 0 Phosphotransferase system, EIIC C1_1 PF00130.17 gi|407465794|ref|YP_006776676.1| - 2.2 8.0 7.8 0.15 11.7 2.2 1.6 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-FCS PF06467.9 gi|407465794|ref|YP_006776676.1| - 7.1 6.3 9.9 13 5.5 0.8 3.1 3 0 0 3 3 3 0 MYM-type Zinc finger with FCS sequence motif Prok-RING_1 PF14446.1 gi|407465794|ref|YP_006776676.1| - 7.3 6.4 9.5 1.4 8.6 3.8 1.8 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 TFIIB PF00382.14 gi|407465796|ref|YP_006776678.1| - 1.3e-33 114.5 7.3 7.7e-18 64.0 0.4 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|407465796|ref|YP_006776678.1| - 2.3e-11 42.8 0.4 4e-11 42.0 0.3 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_11 PF08279.7 gi|407465796|ref|YP_006776678.1| - 0.0032 17.0 0.1 0.073 12.7 0.0 2.6 2 0 0 2 2 2 1 HTH domain zf-ribbon_3 PF13248.1 gi|407465796|ref|YP_006776678.1| - 0.0062 15.7 0.9 0.013 14.6 0.7 1.5 1 0 0 1 1 1 1 zinc-ribbon domain Sigma70_r4 PF04545.11 gi|407465796|ref|YP_006776678.1| - 0.0064 15.7 0.0 0.017 14.3 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.7 gi|407465796|ref|YP_006776678.1| - 0.018 14.4 0.3 0.22 11.0 0.0 2.4 2 0 0 2 2 2 0 Sigma-70, region 4 Cyclin_N PF00134.18 gi|407465796|ref|YP_006776678.1| - 0.025 14.1 0.2 0.11 12.0 0.0 1.9 2 0 0 2 2 2 0 Cyclin, N-terminal domain HTH_AsnC-type PF13404.1 gi|407465796|ref|YP_006776678.1| - 0.026 14.0 0.0 0.22 11.0 0.0 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Baculo_ME53 PF06061.6 gi|407465796|ref|YP_006776678.1| - 0.033 13.1 0.2 0.049 12.6 0.2 1.2 1 0 0 1 1 1 0 Baculoviridae ME53 DZR PF12773.2 gi|407465796|ref|YP_006776678.1| - 0.039 13.7 0.8 0.09 12.6 0.6 1.5 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|407465796|ref|YP_006776678.1| - 0.05 13.1 2.2 0.12 11.8 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain RPA_interact_C PF14768.1 gi|407465796|ref|YP_006776678.1| - 0.076 13.4 0.8 0.15 12.4 0.1 1.9 2 0 0 2 2 1 0 Replication protein A interacting C-terminal HTH_23 PF13384.1 gi|407465796|ref|YP_006776678.1| - 0.077 12.6 2.0 0.15 11.7 0.0 2.5 3 0 0 3 3 3 0 Homeodomain-like domain Na_H_Exchanger PF00999.16 gi|407465797|ref|YP_006776679.1| - 2e-38 131.9 49.4 2.7e-38 131.5 34.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Hemerythrin PF01814.18 gi|407465798|ref|YP_006776680.1| - 6.6e-14 52.2 1.0 9.6e-14 51.6 0.1 1.6 1 1 1 2 2 2 1 Hemerythrin HHE cation binding domain HSBP1 PF06825.7 gi|407465798|ref|YP_006776680.1| - 0.011 15.3 0.1 0.032 13.7 0.0 1.8 2 0 0 2 2 2 0 Heat shock factor binding protein 1 TLD PF07534.11 gi|407465798|ref|YP_006776680.1| - 0.052 13.5 0.0 0.19 11.6 0.0 1.8 2 0 0 2 2 2 0 TLD ORF11CD3 PF10549.4 gi|407465798|ref|YP_006776680.1| - 0.17 11.6 0.5 1.2 8.8 0.0 2.4 3 0 0 3 3 3 0 ORF11CD3 domain APS_kinase PF01583.15 gi|407465799|ref|YP_006776681.1| - 2.5e-45 153.9 0.0 2.9e-45 153.7 0.0 1.0 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.1 gi|407465799|ref|YP_006776681.1| - 3.9e-06 26.7 0.0 4.9e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|407465799|ref|YP_006776681.1| - 1.9e-05 25.4 0.1 5.1e-05 24.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|407465799|ref|YP_006776681.1| - 5.3e-05 23.5 0.1 0.00016 21.9 0.0 1.9 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 gi|407465799|ref|YP_006776681.1| - 0.0022 17.1 0.0 0.003 16.6 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin KTI12 PF08433.5 gi|407465799|ref|YP_006776681.1| - 0.0031 16.7 0.0 0.004 16.3 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Ferrochelatase PF00762.14 gi|407465799|ref|YP_006776681.1| - 0.017 14.1 0.0 0.034 13.1 0.0 1.5 1 1 1 2 2 2 0 Ferrochelatase CPT PF07931.7 gi|407465799|ref|YP_006776681.1| - 0.05 13.2 0.1 2.3 7.7 0.1 2.4 1 1 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_28 PF13521.1 gi|407465799|ref|YP_006776681.1| - 0.087 12.7 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain Inositol_P PF00459.20 gi|407465800|ref|YP_006776682.1| - 1.2e-50 172.3 0.0 1.4e-50 172.0 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.15 gi|407465800|ref|YP_006776682.1| - 0.0032 16.3 0.5 0.0089 14.8 0.1 1.8 2 0 0 2 2 2 1 Fructose-1-6-bisphosphatase IMS_HHH PF11798.3 gi|407465800|ref|YP_006776682.1| - 0.051 13.6 0.0 0.12 12.4 0.0 1.7 1 0 0 1 1 1 0 IMS family HHH motif CRPA PF05745.6 gi|407465801|ref|YP_006776683.1| - 0.0054 16.5 1.2 0.0054 16.5 0.8 1.1 1 0 0 1 1 1 1 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) Acyl_transf_3 PF01757.17 gi|407465801|ref|YP_006776683.1| - 0.076 11.8 1.4 0.085 11.6 1.0 1.0 1 0 0 1 1 1 0 Acyltransferase family Mem_trans PF03547.13 gi|407465801|ref|YP_006776683.1| - 0.11 10.7 4.0 0.13 10.5 2.8 1.0 1 0 0 1 1 1 0 Membrane transport protein DUF2842 PF11003.3 gi|407465801|ref|YP_006776683.1| - 0.18 11.6 5.2 5.5 6.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2842) Tetraspannin PF00335.15 gi|407465801|ref|YP_006776683.1| - 0.58 9.3 2.4 0.66 9.2 1.6 1.0 1 0 0 1 1 1 0 Tetraspanin family adh_short_C2 PF13561.1 gi|407465802|ref|YP_006776684.1| - 1.6e-42 145.9 0.1 2e-42 145.6 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.20 gi|407465802|ref|YP_006776684.1| - 3.1e-32 111.7 0.0 3.8e-32 111.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|407465802|ref|YP_006776684.1| - 6.7e-09 35.6 0.0 1e-08 35.0 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|407465802|ref|YP_006776684.1| - 0.0016 17.9 0.7 0.0062 16.0 0.5 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.14 gi|407465802|ref|YP_006776684.1| - 0.0069 15.4 0.3 0.014 14.5 0.2 1.6 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Eno-Rase_NADH_b PF12242.3 gi|407465802|ref|YP_006776684.1| - 0.016 14.9 0.3 0.042 13.6 0.2 1.8 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NAD_binding_10 PF13460.1 gi|407465802|ref|YP_006776684.1| - 0.079 12.9 0.1 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 NADH(P)-binding DUF3799 PF12684.2 gi|407465802|ref|YP_006776684.1| - 0.095 12.0 0.2 0.2 10.9 0.1 1.5 1 1 0 1 1 1 0 PDDEXK-like domain of unknown function (DUF3799) DUF3836 PF12930.2 gi|407465803|ref|YP_006776685.1| - 0.0046 16.4 0.0 0.0055 16.2 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF3836) DUF1510 PF07423.6 gi|407465803|ref|YP_006776685.1| - 0.22 10.8 1.2 0.37 10.1 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1510) Snf7 PF03357.16 gi|407465804|ref|YP_006776686.1| - 0.00011 21.6 1.3 0.00015 21.2 0.9 1.2 1 0 0 1 1 1 1 Snf7 Nup54 PF13874.1 gi|407465804|ref|YP_006776686.1| - 0.0016 18.1 2.0 0.0023 17.6 1.0 1.5 2 0 0 2 2 2 1 Nucleoporin complex subunit 54 TMF_DNA_bd PF12329.3 gi|407465804|ref|YP_006776686.1| - 0.015 15.1 1.6 0.095 12.5 1.1 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF3958 PF13125.1 gi|407465804|ref|YP_006776686.1| - 0.1 12.5 0.2 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) DUF1664 PF07889.7 gi|407465805|ref|YP_006776687.1| - 0.00066 19.4 6.1 0.00098 18.9 4.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) Laminin_II PF06009.7 gi|407465805|ref|YP_006776687.1| - 0.0012 18.5 6.6 0.002 17.8 4.6 1.4 1 0 0 1 1 1 1 Laminin Domain II Spc7 PF08317.6 gi|407465805|ref|YP_006776687.1| - 0.0017 17.1 12.1 0.0021 16.7 8.4 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein Reo_sigmaC PF04582.7 gi|407465805|ref|YP_006776687.1| - 0.0025 17.0 1.4 0.003 16.7 1.0 1.1 1 0 0 1 1 1 1 Reovirus sigma C capsid protein DUF972 PF06156.8 gi|407465805|ref|YP_006776687.1| - 0.0035 17.6 3.8 0.0035 17.6 2.6 2.2 1 1 2 3 3 2 2 Protein of unknown function (DUF972) Tropomyosin_1 PF12718.2 gi|407465805|ref|YP_006776687.1| - 0.0044 16.8 17.4 0.021 14.6 11.6 2.2 1 1 0 1 1 1 1 Tropomyosin like TMF_DNA_bd PF12329.3 gi|407465805|ref|YP_006776687.1| - 0.0048 16.6 9.9 0.0048 16.6 6.9 2.6 1 1 1 2 2 2 1 TATA element modulatory factor 1 DNA binding AAA_13 PF13166.1 gi|407465805|ref|YP_006776687.1| - 0.0077 14.7 9.7 0.0083 14.6 6.7 1.1 1 0 0 1 1 1 1 AAA domain DUF812 PF05667.6 gi|407465805|ref|YP_006776687.1| - 0.01 14.4 6.6 0.011 14.2 4.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) IncA PF04156.9 gi|407465805|ref|YP_006776687.1| - 0.017 14.7 8.8 0.046 13.3 6.1 1.8 1 1 0 1 1 1 0 IncA protein AKNA PF12443.3 gi|407465805|ref|YP_006776687.1| - 0.025 14.6 2.2 4.6 7.3 0.3 2.5 1 1 2 3 3 3 0 AT-hook-containing transcription factor YlbD_coat PF14071.1 gi|407465805|ref|YP_006776687.1| - 0.026 14.5 4.9 1.3 9.0 1.0 2.6 1 1 1 2 2 2 0 Putative coat protein TBPIP PF07106.8 gi|407465805|ref|YP_006776687.1| - 0.03 13.8 12.7 0.96 8.9 6.5 2.1 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Laminin_I PF06008.9 gi|407465805|ref|YP_006776687.1| - 0.034 13.4 7.5 0.012 14.9 3.4 1.6 1 1 0 2 2 2 0 Laminin Domain I ADIP PF11559.3 gi|407465805|ref|YP_006776687.1| - 0.051 13.4 8.5 0.8 9.5 2.4 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Baculo_PEP_C PF04513.7 gi|407465805|ref|YP_006776687.1| - 0.067 13.0 0.2 0.095 12.5 0.1 1.3 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus ATP-grasp_5 PF13549.1 gi|407465805|ref|YP_006776687.1| - 0.068 12.3 0.1 0.11 11.7 0.1 1.3 1 0 0 1 1 1 0 ATP-grasp domain Snapin_Pallidin PF14712.1 gi|407465805|ref|YP_006776687.1| - 0.068 13.4 6.5 0.16 12.3 3.6 1.9 1 1 0 1 1 1 0 Snapin/Pallidin Prefoldin PF02996.12 gi|407465805|ref|YP_006776687.1| - 0.07 12.7 10.5 0.22 11.1 1.7 2.7 1 1 2 3 3 3 0 Prefoldin subunit Atg14 PF10186.4 gi|407465805|ref|YP_006776687.1| - 0.081 11.8 6.1 0.11 11.3 4.2 1.3 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 DUF3450 PF11932.3 gi|407465805|ref|YP_006776687.1| - 0.081 12.1 3.8 0.12 11.6 2.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Flagellin_C PF00700.16 gi|407465805|ref|YP_006776687.1| - 0.1 12.7 2.9 0.57 10.3 0.2 2.4 2 1 0 2 2 2 0 Bacterial flagellin C-terminal helical region DUF948 PF06103.6 gi|407465805|ref|YP_006776687.1| - 0.13 12.1 4.9 0.13 12.1 1.2 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Spectrin PF00435.16 gi|407465805|ref|YP_006776687.1| - 0.18 12.1 7.8 0.79 10.0 3.1 2.8 1 1 2 3 3 3 0 Spectrin repeat Mnd1 PF03962.10 gi|407465805|ref|YP_006776687.1| - 0.22 11.1 9.3 0.44 10.1 6.4 1.7 1 1 0 1 1 1 0 Mnd1 family Nup54 PF13874.1 gi|407465805|ref|YP_006776687.1| - 0.26 10.9 3.2 0.36 10.4 1.9 1.5 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 NPV_P10 PF05531.7 gi|407465805|ref|YP_006776687.1| - 0.44 10.8 6.6 16 5.7 4.4 2.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Fib_alpha PF08702.5 gi|407465805|ref|YP_006776687.1| - 0.45 10.6 8.0 1.8 8.6 3.5 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF745 PF05335.8 gi|407465805|ref|YP_006776687.1| - 0.61 9.5 3.4 0.43 10.0 1.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF745) GAS PF13851.1 gi|407465805|ref|YP_006776687.1| - 0.67 9.1 15.0 0.39 9.8 8.7 1.5 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Rabaptin PF03528.10 gi|407465805|ref|YP_006776687.1| - 0.7 9.8 10.9 0.9 9.4 5.5 2.0 1 1 1 2 2 2 0 Rabaptin Sipho_Gp157 PF05565.6 gi|407465805|ref|YP_006776687.1| - 0.71 9.4 12.1 2.7 7.5 2.5 2.5 1 1 2 3 3 3 0 Siphovirus Gp157 APG6 PF04111.7 gi|407465805|ref|YP_006776687.1| - 0.84 8.6 9.5 1 8.3 6.6 1.3 1 1 0 1 1 1 0 Autophagy protein Apg6 Syntaxin PF00804.20 gi|407465805|ref|YP_006776687.1| - 0.97 9.6 11.4 3.2 7.9 7.9 2.0 1 1 0 1 1 1 0 Syntaxin DUF4200 PF13863.1 gi|407465805|ref|YP_006776687.1| - 1 9.3 13.4 2.1 8.2 7.7 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) V_ATPase_I PF01496.14 gi|407465805|ref|YP_006776687.1| - 1.5 6.6 7.1 1.6 6.4 4.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BLOC1_2 PF10046.4 gi|407465805|ref|YP_006776687.1| - 1.5 9.0 9.5 14 5.9 5.8 2.6 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CENP-Q PF13094.1 gi|407465805|ref|YP_006776687.1| - 1.6 8.7 8.5 0.57 10.1 4.1 1.6 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit COG2 PF06148.6 gi|407465805|ref|YP_006776687.1| - 1.8 8.4 8.3 2.4 8.0 3.1 2.4 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF848 PF05852.6 gi|407465805|ref|YP_006776687.1| - 2 8.2 9.6 1.1 9.0 4.4 2.0 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) DUF2458 PF10454.4 gi|407465805|ref|YP_006776687.1| - 2.2 8.1 8.7 5.5 6.8 2.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2458) FlxA PF14282.1 gi|407465805|ref|YP_006776687.1| - 2.7 7.9 7.3 2.9 7.8 2.3 2.6 1 1 1 2 2 2 0 FlxA-like protein DUF2203 PF09969.4 gi|407465805|ref|YP_006776687.1| - 3 8.0 5.7 2 8.6 2.2 1.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Prefoldin_2 PF01920.15 gi|407465805|ref|YP_006776687.1| - 6.3 6.6 17.5 3.6 7.3 2.8 3.3 1 1 2 3 3 3 0 Prefoldin subunit FlaC_arch PF05377.6 gi|407465805|ref|YP_006776687.1| - 6.8 6.6 11.7 19 5.2 1.1 3.1 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF3552 PF12072.3 gi|407465805|ref|YP_006776687.1| - 7.6 5.6 15.6 1.6 7.8 8.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF16 PF01519.11 gi|407465805|ref|YP_006776687.1| - 8.7 6.6 13.8 1.1e+03 -0.2 9.6 2.7 1 1 0 1 1 1 0 Protein of unknown function DUF16 KH_5 PF13184.1 gi|407465805|ref|YP_006776687.1| - 8.8 6.2 8.8 19 5.1 0.5 2.6 1 1 1 2 2 2 0 NusA-like KH domain HTH_45 PF14947.1 gi|407465806|ref|YP_006776688.1| - 1.6e-08 34.2 0.0 1.9e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.2 gi|407465806|ref|YP_006776688.1| - 5.8e-06 25.8 0.0 8.2e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|407465806|ref|YP_006776688.1| - 0.0002 21.6 0.0 0.00026 21.2 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4364 PF14277.1 gi|407465806|ref|YP_006776688.1| - 0.025 14.2 0.0 0.031 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) TrmB PF01978.14 gi|407465806|ref|YP_006776688.1| - 0.027 14.1 0.0 0.042 13.5 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.4 gi|407465806|ref|YP_006776688.1| - 0.046 13.6 0.0 0.061 13.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_20 PF12840.2 gi|407465806|ref|YP_006776688.1| - 0.049 13.4 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.17 gi|407465806|ref|YP_006776688.1| - 0.091 12.4 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 MarR family Mrr_N PF14338.1 gi|407465806|ref|YP_006776688.1| - 0.1 12.7 0.0 0.35 10.9 0.0 1.8 1 1 1 2 2 2 0 Mrr N-terminal domain Rrf2 PF02082.15 gi|407465806|ref|YP_006776688.1| - 0.12 12.4 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_24 PF13412.1 gi|407465807|ref|YP_006776689.1| - 0.0015 17.9 0.0 0.0027 17.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GntR PF00392.16 gi|407465807|ref|YP_006776689.1| - 0.012 15.0 0.0 0.026 13.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family TrmB PF01978.14 gi|407465807|ref|YP_006776689.1| - 0.061 13.0 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF3042 PF11240.3 gi|407465807|ref|YP_006776689.1| - 0.081 12.7 0.8 0.17 11.6 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3042) MarR_2 PF12802.2 gi|407465807|ref|YP_006776689.1| - 0.13 11.9 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 MarR family Snf7 PF03357.16 gi|407465808|ref|YP_006776690.1| - 0.0038 16.6 8.4 0.16 11.3 1.8 2.6 2 1 0 2 2 2 2 Snf7 CHAD PF05235.9 gi|407465808|ref|YP_006776690.1| - 0.012 15.2 0.5 0.022 14.3 0.3 1.4 1 1 0 1 1 1 0 CHAD domain Apo-CII PF05355.6 gi|407465808|ref|YP_006776690.1| - 0.04 13.7 1.0 7 6.5 0.0 3.3 2 1 1 3 3 3 0 Apolipoprotein C-II YfdX PF10938.3 gi|407465808|ref|YP_006776690.1| - 0.075 12.6 4.0 0.15 11.6 0.5 2.3 2 0 0 2 2 2 0 YfdX protein PilJ PF13675.1 gi|407465808|ref|YP_006776690.1| - 0.075 13.3 3.5 0.66 10.3 0.8 2.9 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term Zw10 PF06248.8 gi|407465808|ref|YP_006776690.1| - 0.1 10.7 14.6 0.035 12.2 5.9 2.2 1 1 1 2 2 2 0 Centromere/kinetochore Zw10 Ribosomal_L18_c PF14204.1 gi|407465808|ref|YP_006776690.1| - 0.21 12.1 1.9 4.2 8.0 0.1 2.8 1 1 0 2 2 2 0 Ribosomal L18 C-terminal region Fib_alpha PF08702.5 gi|407465808|ref|YP_006776690.1| - 0.28 11.2 14.1 0.031 14.3 1.5 2.9 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Nuc-transf PF10127.4 gi|407465808|ref|YP_006776690.1| - 0.29 10.4 3.4 1.1 8.5 0.2 2.3 2 1 0 2 2 2 0 Predicted nucleotidyltransferase PTPA PF03095.10 gi|407465808|ref|YP_006776690.1| - 0.36 9.9 5.7 0.8 8.8 0.3 2.3 1 1 0 2 2 2 0 Phosphotyrosyl phosphate activator (PTPA) protein Phage_connect_1 PF05135.8 gi|407465808|ref|YP_006776690.1| - 0.75 9.9 7.8 9 6.5 0.1 3.3 2 2 1 3 3 3 0 Phage gp6-like head-tail connector protein MutS_III PF05192.13 gi|407465808|ref|YP_006776690.1| - 0.76 9.5 8.5 1.3 8.8 5.7 1.4 1 1 0 1 1 1 0 MutS domain III Endotoxin_N PF03945.9 gi|407465808|ref|YP_006776690.1| - 0.79 9.0 7.8 2.4 7.4 0.9 2.8 1 1 1 3 3 3 0 delta endotoxin, N-terminal domain DUF4404 PF14357.1 gi|407465808|ref|YP_006776690.1| - 0.9 9.9 14.3 19 5.7 0.2 4.1 2 2 2 4 4 4 0 Domain of unknown function (DUF4404) Cytochrom_B562 PF07361.6 gi|407465808|ref|YP_006776690.1| - 1.6 9.1 8.9 8.2 6.9 0.2 3.7 1 1 3 4 4 4 0 Cytochrome b562 Snapin_Pallidin PF14712.1 gi|407465808|ref|YP_006776690.1| - 2.2 8.6 10.9 1 9.6 1.9 3.0 1 1 2 3 3 3 0 Snapin/Pallidin DUF3347 PF11827.3 gi|407465808|ref|YP_006776690.1| - 4.1 7.3 9.9 3.3 7.6 0.2 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) Syntaxin-6_N PF09177.6 gi|407465808|ref|YP_006776690.1| - 5.6 7.4 14.1 6.7 7.1 1.2 3.8 1 1 2 4 4 4 0 Syntaxin 6, N-terminal Fzo_mitofusin PF04799.8 gi|407465808|ref|YP_006776690.1| - 6.2 6.1 8.0 0.98 8.7 0.7 2.5 2 1 1 3 3 3 0 fzo-like conserved region Occludin_ELL PF07303.8 gi|407465808|ref|YP_006776690.1| - 9.7 6.9 12.0 9 7.0 1.8 3.0 1 1 2 3 3 3 0 Occludin homology domain MFS_2 PF13347.1 gi|407465809|ref|YP_006776691.1| - 0.0013 17.2 0.7 0.0014 17.1 0.5 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF981 PF06168.6 gi|407465809|ref|YP_006776691.1| - 0.024 14.4 2.4 0.026 14.3 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF981) Tetraspannin PF00335.15 gi|407465809|ref|YP_006776691.1| - 0.53 9.5 3.1 0.6 9.3 2.1 1.0 1 0 0 1 1 1 0 Tetraspanin family DUF2530 PF10745.4 gi|407465809|ref|YP_006776691.1| - 0.71 9.8 3.2 1.1 9.2 2.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2530) SKG6 PF08693.5 gi|407465809|ref|YP_006776691.1| - 2.1 7.7 4.7 0.81 9.0 0.5 2.0 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Fer4_14 PF13394.1 gi|407465810|ref|YP_006776692.1| - 1.6e-15 57.1 0.1 3.4e-15 56.1 0.0 1.6 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|407465810|ref|YP_006776692.1| - 2.7e-14 53.4 0.4 1.1e-13 51.4 0.0 1.9 1 1 0 2 2 2 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|407465810|ref|YP_006776692.1| - 4e-11 43.3 0.2 6.9e-11 42.6 0.1 1.4 1 1 0 1 1 1 1 Radical SAM superfamily Antigen_Bd37 PF11641.3 gi|407465810|ref|YP_006776692.1| - 0.055 12.7 0.1 0.074 12.3 0.0 1.2 1 0 0 1 1 1 0 Glycosylphosphatidylinositol-anchored merozoite surface protein YecM PF06185.7 gi|407465810|ref|YP_006776692.1| - 0.093 11.9 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 YecM protein GTP_cyclohydroI PF01227.17 gi|407465811|ref|YP_006776693.1| - 3.4e-64 215.4 0.0 3.8e-64 215.2 0.0 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.1 gi|407465811|ref|YP_006776693.1| - 0.0051 16.7 0.0 0.0088 15.9 0.0 1.4 1 0 0 1 1 1 1 QueF-like protein PDEase_I PF00233.14 gi|407465811|ref|YP_006776693.1| - 0.038 13.7 0.0 0.11 12.2 0.0 1.6 1 1 1 2 2 2 0 3'5'-cyclic nucleotide phosphodiesterase OST-HTH PF12872.2 gi|407465811|ref|YP_006776693.1| - 0.07 12.9 0.1 7.5 6.4 0.0 2.4 2 0 0 2 2 2 0 OST-HTH/LOTUS domain QueC PF06508.8 gi|407465813|ref|YP_006776695.1| - 6.4e-49 166.0 0.1 7.3e-49 165.8 0.1 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Arginosuc_synth PF00764.14 gi|407465813|ref|YP_006776695.1| - 3.3e-05 23.0 0.0 4.1e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.16 gi|407465813|ref|YP_006776695.1| - 0.00011 21.7 0.1 0.00017 21.1 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|407465813|ref|YP_006776695.1| - 0.0086 14.9 0.1 0.015 14.2 0.0 1.4 2 0 0 2 2 2 1 NAD synthase GHMP_kinases_N PF00288.21 gi|407465814|ref|YP_006776696.1| - 2.8e-15 56.1 3.2 6.3e-15 54.9 2.2 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|407465814|ref|YP_006776696.1| - 5.3e-10 39.3 0.0 9.7e-10 38.5 0.0 1.4 1 0 0 1 1 1 1 GHMP kinases C terminal ATP_bind_1 PF03029.12 gi|407465815|ref|YP_006776697.1| - 4.7e-57 193.2 0.0 5.3e-57 193.0 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein CbiA PF01656.18 gi|407465815|ref|YP_006776697.1| - 9.4e-07 28.4 0.1 1.2e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_17 PF13207.1 gi|407465815|ref|YP_006776697.1| - 0.00018 22.3 0.0 0.00031 21.5 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|407465815|ref|YP_006776697.1| - 0.003 17.5 0.0 0.0048 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.1 gi|407465815|ref|YP_006776697.1| - 0.0031 17.8 0.0 0.0065 16.7 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|407465815|ref|YP_006776697.1| - 0.0031 16.9 0.1 0.005 16.3 0.1 1.6 1 1 0 1 1 1 1 AAA-like domain DUF2075 PF09848.4 gi|407465815|ref|YP_006776697.1| - 0.0042 16.1 0.1 0.0067 15.4 0.1 1.6 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) KaiC PF06745.8 gi|407465815|ref|YP_006776697.1| - 0.0066 15.5 0.0 0.0091 15.1 0.0 1.2 1 0 0 1 1 1 1 KaiC ArgK PF03308.11 gi|407465815|ref|YP_006776697.1| - 0.0068 15.2 0.0 0.01 14.6 0.0 1.3 1 0 0 1 1 1 1 ArgK protein AAA_22 PF13401.1 gi|407465815|ref|YP_006776697.1| - 0.019 15.1 0.0 0.037 14.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|407465815|ref|YP_006776697.1| - 0.021 14.4 0.0 0.49 10.0 0.0 2.1 2 0 0 2 2 2 0 NACHT domain SRP54 PF00448.17 gi|407465815|ref|YP_006776697.1| - 0.041 13.3 0.1 1.1 8.6 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MMR_HSR1 PF01926.18 gi|407465815|ref|YP_006776697.1| - 0.051 13.5 0.1 0.13 12.2 0.1 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase APS_kinase PF01583.15 gi|407465815|ref|YP_006776697.1| - 0.088 12.4 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase Zeta_toxin PF06414.7 gi|407465815|ref|YP_006776697.1| - 0.17 10.9 0.0 0.25 10.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin UPF0104 PF03706.8 gi|407465816|ref|YP_006776698.1| - 2.2e-23 83.0 21.0 2.9e-23 82.5 14.6 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) SIS PF01380.17 gi|407465816|ref|YP_006776698.1| - 0.0092 15.5 0.0 0.021 14.4 0.0 1.6 1 0 0 1 1 1 1 SIS domain UPF0233 PF06781.7 gi|407465816|ref|YP_006776698.1| - 0.13 11.8 6.0 4.1 7.1 0.3 3.5 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0233) DUF2627 PF11118.3 gi|407465816|ref|YP_006776698.1| - 0.9 9.6 9.9 1.4 9.1 0.2 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2627) adh_short PF00106.20 gi|407465817|ref|YP_006776699.1| - 2.7e-38 131.4 0.0 3.6e-38 131.1 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|407465817|ref|YP_006776699.1| - 4.2e-16 59.1 0.0 6.5e-16 58.5 0.0 1.3 1 0 0 1 1 1 1 KR domain adh_short_C2 PF13561.1 gi|407465817|ref|YP_006776699.1| - 6.5e-13 49.0 0.7 8.8e-13 48.5 0.5 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase NAD_binding_10 PF13460.1 gi|407465817|ref|YP_006776699.1| - 1.5e-06 28.3 0.0 4.9e-06 26.6 0.0 1.9 1 1 0 1 1 1 1 NADH(P)-binding Eno-Rase_NADH_b PF12242.3 gi|407465817|ref|YP_006776699.1| - 3e-05 23.7 0.0 8e-05 22.3 0.0 1.7 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DUF1776 PF08643.5 gi|407465817|ref|YP_006776699.1| - 0.0005 19.3 0.0 0.0012 18.0 0.0 1.5 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) Polysacc_synt_2 PF02719.10 gi|407465817|ref|YP_006776699.1| - 0.0011 17.9 0.2 0.0015 17.4 0.2 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein DFP PF04127.10 gi|407465817|ref|YP_006776699.1| - 0.0019 17.8 0.2 0.0046 16.6 0.1 1.6 1 1 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein Pyr_redox PF00070.22 gi|407465817|ref|YP_006776699.1| - 0.011 16.0 0.2 0.049 14.0 0.1 2.2 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3Beta_HSD PF01073.14 gi|407465817|ref|YP_006776699.1| - 0.015 14.0 0.2 0.035 12.7 0.1 1.6 1 1 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.16 gi|407465817|ref|YP_006776699.1| - 0.023 14.1 0.0 0.034 13.5 0.0 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Saccharop_dh PF03435.13 gi|407465817|ref|YP_006776699.1| - 0.024 13.6 0.1 0.036 13.0 0.1 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase 3HCDH_N PF02737.13 gi|407465817|ref|YP_006776699.1| - 0.055 13.1 0.2 0.13 11.9 0.1 1.7 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|407465817|ref|YP_006776699.1| - 0.056 12.6 0.1 0.11 11.6 0.0 1.6 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.16 gi|407465817|ref|YP_006776699.1| - 0.09 12.3 0.1 0.19 11.2 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Zn_Tnp_IS1595 PF12760.2 gi|407465818|ref|YP_006776700.1| - 0.017 14.9 0.0 3.8 7.3 0.0 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Ribosomal_L32p PF01783.18 gi|407465818|ref|YP_006776700.1| - 0.017 15.3 2.8 0.019 15.1 0.0 2.3 3 0 0 3 3 3 0 Ribosomal L32p protein family OrfB_Zn_ribbon PF07282.6 gi|407465818|ref|YP_006776700.1| - 0.02 14.5 0.5 0.65 9.6 0.1 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain OS-D PF03392.8 gi|407465818|ref|YP_006776700.1| - 0.03 14.2 0.1 0.062 13.2 0.1 1.5 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D Zn-ribbon_8 PF09723.5 gi|407465818|ref|YP_006776700.1| - 0.033 14.1 1.2 2.2 8.3 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|407465818|ref|YP_006776700.1| - 0.058 12.7 0.6 4.2 6.7 0.0 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding DUF2296 PF10058.4 gi|407465818|ref|YP_006776700.1| - 0.11 12.2 0.4 0.43 10.3 0.0 2.0 2 0 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) PhnA_Zn_Ribbon PF08274.7 gi|407465818|ref|YP_006776700.1| - 0.15 11.8 0.6 1.8 8.4 0.1 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Methyltransf_15 PF09445.5 gi|407465819|ref|YP_006776701.1| - 0.016 14.7 0.5 0.042 13.4 0.3 1.6 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase PAPS_reduct PF01507.14 gi|407465820|ref|YP_006776702.1| - 3.6e-45 153.8 0.0 4.5e-45 153.5 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ATP-sulfurylase PF01747.12 gi|407465821|ref|YP_006776703.1| - 4.7e-86 287.5 0.0 6.5e-86 287.0 0.0 1.2 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.1 gi|407465821|ref|YP_006776703.1| - 9.4e-46 155.1 0.0 4.5e-45 152.9 0.0 2.0 2 0 0 2 2 2 1 PUA-like domain HhH-GPD PF00730.20 gi|407465823|ref|YP_006776705.1| - 1.4e-24 86.4 0.1 2.5e-24 85.6 0.1 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|407465823|ref|YP_006776705.1| - 1.1e-08 34.2 0.0 3.5e-08 32.6 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF2400 PF09674.5 gi|407465823|ref|YP_006776705.1| - 0.00044 20.0 0.1 0.0051 16.5 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2400) HHH_5 PF14520.1 gi|407465823|ref|YP_006776705.1| - 0.0035 17.4 0.1 0.03 14.4 0.1 2.2 1 1 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|407465823|ref|YP_006776705.1| - 0.022 14.6 0.0 3.2 7.7 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix motif DUF4028 PF13220.1 gi|407465823|ref|YP_006776705.1| - 0.029 14.0 0.7 0.068 12.8 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4028) RTX_C PF08339.5 gi|407465823|ref|YP_006776705.1| - 0.047 13.4 0.7 0.26 10.9 0.6 1.9 1 1 1 2 2 2 0 RTX C-terminal domain EndIII_4Fe-2S PF10576.4 gi|407465823|ref|YP_006776705.1| - 0.92 9.7 4.5 1.8 8.8 3.1 1.5 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III TSP_3 PF02412.13 gi|407465824|ref|YP_006776706.1| - 0.0028 17.0 3.1 0.0028 17.0 2.2 3.8 2 2 2 4 4 4 3 Thrombospondin type 3 repeat DUF521 PF04412.8 gi|407465825|ref|YP_006776707.1| - 5.2e-100 334.8 0.0 1.2e-99 333.6 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF521) DUF126 PF01989.11 gi|407465826|ref|YP_006776708.1| - 1.6e-29 101.4 0.1 2.2e-29 100.9 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF126 FbpA PF05833.6 gi|407465827|ref|YP_006776709.1| - 6.9e-43 146.8 11.2 8.7e-43 146.5 7.8 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) DUF814 PF05670.8 gi|407465827|ref|YP_006776709.1| - 1.5e-16 60.0 0.0 3.9e-16 58.7 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF814) 7TM_GPCR_Srsx PF10320.4 gi|407465828|ref|YP_006776710.1| - 0.0012 18.0 0.8 0.0019 17.4 0.6 1.2 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srsx Rab5ip PF07019.7 gi|407465828|ref|YP_006776710.1| - 0.0067 16.5 5.6 0.017 15.2 3.9 1.7 1 1 0 1 1 1 1 Rab5-interacting protein (Rab5ip) Herpes_UL43 PF05072.8 gi|407465828|ref|YP_006776710.1| - 0.032 13.0 0.0 0.037 12.7 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL43 protein Yip1 PF04893.12 gi|407465828|ref|YP_006776710.1| - 0.052 13.0 2.0 0.12 11.8 1.4 1.6 1 1 0 1 1 1 0 Yip1 domain OST3_OST6 PF04756.8 gi|407465828|ref|YP_006776710.1| - 0.083 12.4 1.6 1.2 8.6 0.0 2.1 1 1 1 2 2 2 0 OST3 / OST6 family Methyltransf_18 PF12847.2 gi|407465829|ref|YP_006776711.1| - 1.3e-16 61.2 0.0 2e-16 60.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|407465829|ref|YP_006776711.1| - 3.5e-16 59.1 1.4 9e-16 57.8 1.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|407465829|ref|YP_006776711.1| - 1.2e-11 44.6 0.5 1.5e-11 44.2 0.3 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.9 gi|407465829|ref|YP_006776711.1| - 7.4e-11 41.7 0.2 2.6e-10 39.9 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|407465829|ref|YP_006776711.1| - 4.3e-10 39.1 1.8 5.7e-10 38.7 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.12 gi|407465829|ref|YP_006776711.1| - 2.8e-09 36.2 0.2 1.1e-08 34.3 0.0 1.8 2 0 0 2 2 2 1 Putative methyltransferase GCD14 PF08704.5 gi|407465829|ref|YP_006776711.1| - 1.5e-08 34.4 0.0 1.9e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Ubie_methyltran PF01209.13 gi|407465829|ref|YP_006776711.1| - 7.1e-08 31.8 0.2 1.2e-07 31.1 0.1 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_26 PF13659.1 gi|407465829|ref|YP_006776711.1| - 2e-07 31.0 0.0 4.6e-07 29.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|407465829|ref|YP_006776711.1| - 1.1e-06 28.9 0.0 3.4e-06 27.4 0.0 1.9 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|407465829|ref|YP_006776711.1| - 1.7e-06 28.4 0.1 4.1e-06 27.1 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|407465829|ref|YP_006776711.1| - 2.7e-06 27.6 0.0 7.7e-06 26.2 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase domain UPF0020 PF01170.13 gi|407465829|ref|YP_006776711.1| - 3.5e-06 26.7 0.1 7.9e-06 25.5 0.0 1.5 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 CMAS PF02353.15 gi|407465829|ref|YP_006776711.1| - 1.5e-05 24.2 0.0 2.1e-05 23.7 0.0 1.5 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_3 PF01596.12 gi|407465829|ref|YP_006776711.1| - 2.1e-05 23.6 0.2 3.6e-05 22.9 0.1 1.3 1 1 0 1 1 1 1 O-methyltransferase GidB PF02527.10 gi|407465829|ref|YP_006776711.1| - 2.8e-05 23.3 0.3 5.7e-05 22.3 0.1 1.4 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G Cons_hypoth95 PF03602.10 gi|407465829|ref|YP_006776711.1| - 3.1e-05 23.4 0.0 3.6e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 DUF633 PF04816.7 gi|407465829|ref|YP_006776711.1| - 3.6e-05 23.2 1.0 4.4e-05 22.9 0.7 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF633) Met_10 PF02475.11 gi|407465829|ref|YP_006776711.1| - 0.00032 20.3 0.1 0.00038 20.1 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_15 PF09445.5 gi|407465829|ref|YP_006776711.1| - 0.00041 19.9 0.2 0.0006 19.4 0.2 1.5 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase FtsJ PF01728.14 gi|407465829|ref|YP_006776711.1| - 0.00044 20.2 0.0 0.15 11.9 0.0 2.1 2 0 0 2 2 2 1 FtsJ-like methyltransferase RrnaAD PF00398.15 gi|407465829|ref|YP_006776711.1| - 0.00079 18.5 0.0 0.0011 18.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.1 gi|407465829|ref|YP_006776711.1| - 0.0019 18.9 0.0 0.0035 18.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|407465829|ref|YP_006776711.1| - 0.0042 16.8 0.0 0.0068 16.1 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_5 PF01795.14 gi|407465829|ref|YP_006776711.1| - 0.0062 15.8 0.0 0.012 14.8 0.0 1.5 1 1 0 1 1 1 1 MraW methylase family DOT1 PF08123.8 gi|407465829|ref|YP_006776711.1| - 0.0075 15.5 0.2 0.027 13.7 0.2 1.9 1 1 0 1 1 1 1 Histone methylation protein DOT1 N6_N4_Mtase PF01555.13 gi|407465829|ref|YP_006776711.1| - 0.024 14.1 0.0 0.48 9.8 0.0 2.0 2 0 0 2 2 2 0 DNA methylase Methyltransf_32 PF13679.1 gi|407465829|ref|YP_006776711.1| - 0.034 13.8 0.2 0.085 12.5 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Apocytochr_F_C PF01333.14 gi|407465829|ref|YP_006776711.1| - 0.042 13.6 0.3 0.071 12.9 0.2 1.6 1 1 0 1 1 1 0 Apocytochrome F, C-terminal N6_Mtase PF02384.11 gi|407465829|ref|YP_006776711.1| - 0.052 12.6 0.0 0.078 12.0 0.0 1.3 1 0 0 1 1 1 0 N-6 DNA Methylase tRNA_U5-meth_tr PF05958.6 gi|407465829|ref|YP_006776711.1| - 0.066 11.8 0.0 0.087 11.4 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase TRM PF02005.11 gi|407465829|ref|YP_006776711.1| - 0.07 12.0 0.0 0.085 11.7 0.0 1.1 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase TP_methylase PF00590.15 gi|407465830|ref|YP_006776712.1| - 1e-49 169.0 0.0 1.2e-49 168.9 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Abhydrolase_2 PF02230.11 gi|407465830|ref|YP_006776712.1| - 0.12 11.7 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase CW_binding_2 PF04122.7 gi|407465830|ref|YP_006776712.1| - 0.12 12.5 1.3 1.8 8.8 0.0 2.6 2 1 0 2 2 2 0 Putative cell wall binding repeat 2 TP_methylase PF00590.15 gi|407465831|ref|YP_006776713.1| - 2.1e-45 155.0 0.1 2.5e-45 154.7 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.16 gi|407465831|ref|YP_006776713.1| - 0.0046 17.1 0.2 0.014 15.5 0.2 1.9 1 1 0 1 1 1 1 Radical SAM superfamily DUF2741 PF10890.3 gi|407465831|ref|YP_006776713.1| - 0.028 14.5 0.0 0.06 13.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2741) Tmemb_170 PF10190.4 gi|407465831|ref|YP_006776713.1| - 0.052 13.5 0.5 0.21 11.6 0.0 2.0 2 0 0 2 2 2 0 Putative transmembrane protein 170 Asp_Glu_race PF01177.17 gi|407465832|ref|YP_006776714.1| - 8.6e-24 84.6 0.0 1e-23 84.3 0.0 1.1 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase RNA_pol_Rpb1_5 PF04998.12 gi|407465832|ref|YP_006776714.1| - 0.93 8.6 5.7 1.3 8.2 3.9 1.3 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 Snf7 PF03357.16 gi|407465833|ref|YP_006776715.1| - 0.0032 16.8 10.0 0.012 15.0 6.9 2.0 1 1 0 1 1 1 1 Snf7 Baculo_PEP_C PF04513.7 gi|407465833|ref|YP_006776715.1| - 0.016 15.0 2.5 0.49 10.2 0.2 2.4 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF694 PF05107.7 gi|407465833|ref|YP_006776715.1| - 0.027 13.6 0.1 0.037 13.2 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF694) Spc24 PF08286.6 gi|407465833|ref|YP_006776715.1| - 0.2 11.3 4.0 0.25 11.0 0.3 2.5 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 CCDC155 PF14662.1 gi|407465833|ref|YP_006776715.1| - 0.26 10.8 6.1 0.15 11.5 2.5 1.8 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 DUF1110 PF06533.7 gi|407465833|ref|YP_006776715.1| - 0.41 10.4 3.2 0.28 10.9 0.5 2.0 2 2 0 2 2 2 0 Protein of unknown function (DUF1110) NPV_P10 PF05531.7 gi|407465833|ref|YP_006776715.1| - 0.87 9.8 4.9 9.4 6.5 0.5 2.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Flagellin_C PF00700.16 gi|407465833|ref|YP_006776715.1| - 1.2 9.3 5.4 3.3 7.9 0.6 2.8 2 1 0 2 2 2 0 Bacterial flagellin C-terminal helical region DUF745 PF05335.8 gi|407465833|ref|YP_006776715.1| - 4.5 6.7 9.0 2.4 7.6 1.1 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF745) Glycos_transf_2 PF00535.21 gi|407465834|ref|YP_006776716.1| - 5.3e-32 110.8 0.1 1e-31 109.9 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 GtrA PF04138.9 gi|407465834|ref|YP_006776716.1| - 4e-25 88.0 8.1 7.9e-25 87.0 5.6 1.5 1 0 0 1 1 1 1 GtrA-like protein Glyco_tranf_2_3 PF13641.1 gi|407465834|ref|YP_006776716.1| - 1.4e-07 31.5 0.0 2.2e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|407465834|ref|YP_006776716.1| - 0.00019 20.6 1.4 0.00033 19.8 1.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.1 gi|407465834|ref|YP_006776716.1| - 0.012 14.8 0.0 0.023 13.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase like family DUF1279 PF06916.8 gi|407465834|ref|YP_006776716.1| - 0.1 12.9 0.7 0.26 11.6 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1279) Epimerase PF01370.16 gi|407465835|ref|YP_006776717.1| - 1.3e-17 64.0 0.0 8e-17 61.4 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|407465835|ref|YP_006776717.1| - 0.00088 18.2 0.0 0.073 11.9 0.0 2.6 2 1 0 2 2 2 2 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 gi|407465835|ref|YP_006776717.1| - 0.0095 14.8 0.0 0.031 13.1 0.0 1.7 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Glycos_transf_2 PF00535.21 gi|407465836|ref|YP_006776718.1| - 1.5e-21 76.8 0.9 2.7e-21 75.9 0.6 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|407465836|ref|YP_006776718.1| - 1.1e-08 35.1 0.0 1.4e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 DUF2304 PF10066.4 gi|407465836|ref|YP_006776718.1| - 7.9e-08 32.1 9.9 1.9e-07 30.9 6.8 1.6 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) Glyco_tranf_2_4 PF13704.1 gi|407465836|ref|YP_006776718.1| - 0.081 13.2 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 NTP_transferase PF00483.18 gi|407465837|ref|YP_006776719.1| - 4.8e-17 62.0 0.0 7.3e-17 61.4 0.0 1.3 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|407465837|ref|YP_006776719.1| - 2.7e-08 34.0 0.0 2.7e-08 34.0 0.0 1.4 1 1 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|407465837|ref|YP_006776719.1| - 0.014 14.9 0.0 0.021 14.3 0.0 1.4 1 1 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Epimerase PF01370.16 gi|407465838|ref|YP_006776720.1| - 4.4e-34 117.9 0.0 5.4e-34 117.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|407465838|ref|YP_006776720.1| - 5.4e-14 51.5 0.0 6.9e-14 51.2 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 gi|407465838|ref|YP_006776720.1| - 9e-12 44.4 0.0 1.2e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.1 gi|407465838|ref|YP_006776720.1| - 1.4e-07 31.7 0.0 3.2e-07 30.5 0.0 1.6 1 1 0 1 1 1 1 NADH(P)-binding NAD_binding_4 PF07993.7 gi|407465838|ref|YP_006776720.1| - 2.8e-05 23.1 0.1 0.022 13.7 0.0 2.3 2 0 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.10 gi|407465838|ref|YP_006776720.1| - 0.026 13.4 0.0 0.067 12.0 0.0 1.7 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein Radical_SAM PF04055.16 gi|407465839|ref|YP_006776721.1| - 6.7e-16 58.9 0.2 2.3e-15 57.1 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.14 gi|407465839|ref|YP_006776721.1| - 0.00017 21.4 0.0 0.00044 20.0 0.0 1.7 1 0 0 1 1 1 1 B12 binding domain SLA_LP_auto_ag PF05889.8 gi|407465839|ref|YP_006776721.1| - 0.045 12.2 0.1 0.083 11.3 0.0 1.3 1 0 0 1 1 1 0 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Beta_helix PF13229.1 gi|407465840|ref|YP_006776722.1| - 0.048 13.4 4.4 0.068 12.9 3.0 1.3 1 0 0 1 1 1 0 Right handed beta helix region DUF3280 PF11684.3 gi|407465842|ref|YP_006776724.1| - 0.077 13.1 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2380) UPF0104 PF03706.8 gi|407465843|ref|YP_006776725.1| - 1.4e-18 67.2 13.4 1.6e-18 67.0 9.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Vma12 PF11712.3 gi|407465843|ref|YP_006776725.1| - 7.4 6.2 6.7 0.52 10.0 0.9 1.9 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Glycos_transf_2 PF00535.21 gi|407465844|ref|YP_006776726.1| - 5.8e-28 97.6 0.8 9e-28 97.0 0.6 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|407465844|ref|YP_006776726.1| - 5.3e-06 26.4 0.0 7.8e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|407465844|ref|YP_006776726.1| - 5.9e-05 22.2 1.5 8.4e-05 21.7 1.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|407465844|ref|YP_006776726.1| - 0.034 14.4 0.0 0.068 13.5 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Radical_SAM PF04055.16 gi|407465845|ref|YP_006776727.1| - 3e-17 63.2 0.3 7.5e-17 62.0 0.1 1.7 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|407465845|ref|YP_006776727.1| - 1.8e-09 37.6 0.1 6.7e-09 35.8 0.0 2.0 1 1 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.1 gi|407465845|ref|YP_006776727.1| - 5.4e-08 33.0 2.4 8.8e-08 32.3 0.1 2.6 2 1 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|407465845|ref|YP_006776727.1| - 6.9e-07 29.4 0.1 6.9e-07 29.4 0.1 2.5 4 1 0 4 4 4 1 4Fe-4S single cluster domain RRM_2 PF04059.7 gi|407465845|ref|YP_006776727.1| - 0.034 14.1 0.8 0.12 12.3 0.0 2.3 3 0 0 3 3 3 0 RNA recognition motif 2 Epimerase PF01370.16 gi|407465846|ref|YP_006776728.1| - 1e-12 48.0 0.1 1.8e-10 40.7 0.1 2.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|407465846|ref|YP_006776728.1| - 1.6e-06 27.2 0.0 3.3e-05 22.9 0.0 2.0 2 0 0 2 2 2 1 RmlD substrate binding domain NAD_binding_10 PF13460.1 gi|407465846|ref|YP_006776728.1| - 5.9e-06 26.4 0.0 0.00016 21.7 0.0 2.1 1 1 0 1 1 1 1 NADH(P)-binding Semialdhyde_dh PF01118.19 gi|407465846|ref|YP_006776728.1| - 0.014 15.6 0.2 1.1 9.5 0.0 2.9 2 1 1 3 3 3 0 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_8 PF13450.1 gi|407465846|ref|YP_006776728.1| - 0.071 13.1 0.0 0.91 9.5 0.0 2.4 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain 3Beta_HSD PF01073.14 gi|407465846|ref|YP_006776728.1| - 0.1 11.2 2.7 0.56 8.8 0.1 2.7 3 0 0 3 3 3 0 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.16 gi|407465847|ref|YP_006776729.1| - 2e-26 92.8 0.0 7.2e-23 81.2 0.0 2.1 1 1 0 2 2 2 2 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.7 gi|407465847|ref|YP_006776729.1| - 1.7e-07 30.4 0.0 4.8e-07 28.9 0.0 1.7 2 0 0 2 2 2 1 Male sterility protein 3Beta_HSD PF01073.14 gi|407465847|ref|YP_006776729.1| - 3.5e-05 22.6 0.0 0.0011 17.6 0.0 2.1 1 1 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 gi|407465847|ref|YP_006776729.1| - 0.00013 20.9 0.0 0.0006 18.7 0.0 1.9 2 0 0 2 2 2 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 gi|407465847|ref|YP_006776729.1| - 0.01 14.7 0.1 0.017 14.0 0.1 1.3 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein TehB PF03848.9 gi|407465847|ref|YP_006776729.1| - 0.06 12.5 1.0 0.12 11.5 0.6 1.5 2 0 0 2 2 2 0 Tellurite resistance protein TehB DUF2058 PF09831.4 gi|407465847|ref|YP_006776729.1| - 0.082 12.7 1.3 0.21 11.4 0.7 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2058) CmcI PF04989.7 gi|407465848|ref|YP_006776730.1| - 2.9e-83 278.2 0.1 4e-83 277.7 0.1 1.2 1 0 0 1 1 1 1 Cephalosporin hydroxylase Methyltransf_24 PF13578.1 gi|407465848|ref|YP_006776730.1| - 1.7e-09 38.4 0.0 2.6e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.12 gi|407465848|ref|YP_006776730.1| - 7.3e-06 25.1 0.1 1e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_18 PF12847.2 gi|407465848|ref|YP_006776730.1| - 0.00098 19.6 0.0 0.0018 18.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TylF PF05711.6 gi|407465848|ref|YP_006776730.1| - 0.0053 15.8 0.1 0.55 9.2 0.0 2.1 1 1 0 2 2 2 1 Macrocin-O-methyltransferase (TylF) Glyco_transf_21 PF13506.1 gi|407465848|ref|YP_006776730.1| - 0.026 13.8 0.0 0.045 13.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 21 DUF3854 PF12965.2 gi|407465848|ref|YP_006776730.1| - 0.031 13.9 0.0 0.058 13.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) GshA PF08886.6 gi|407465848|ref|YP_006776730.1| - 0.036 12.3 0.1 0.05 11.9 0.0 1.2 1 0 0 1 1 1 0 Glutamate-cysteine ligase Alg14 PF08660.6 gi|407465848|ref|YP_006776730.1| - 0.041 13.8 0.0 0.098 12.6 0.0 1.7 1 1 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like Toprim PF01751.17 gi|407465848|ref|YP_006776730.1| - 0.17 11.8 1.2 0.21 11.5 0.1 1.7 2 0 0 2 2 2 0 Toprim domain dTDP_sugar_isom PF00908.12 gi|407465849|ref|YP_006776731.1| - 7.5e-67 224.0 0.2 8.5e-67 223.8 0.2 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase FdtA PF05523.6 gi|407465849|ref|YP_006776731.1| - 0.0016 17.9 0.1 0.0023 17.4 0.0 1.2 1 0 0 1 1 1 1 WxcM-like, C-terminal UPF0228 PF05727.6 gi|407465849|ref|YP_006776731.1| - 0.11 12.2 0.8 0.45 10.2 0.1 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0228) TPR_11 PF13414.1 gi|407465851|ref|YP_006776733.1| - 6.5e-25 86.5 5.3 1.1e-12 47.3 0.2 3.0 1 1 3 4 4 4 4 TPR repeat TPR_1 PF00515.23 gi|407465851|ref|YP_006776733.1| - 7.1e-18 63.4 5.1 2.4e-07 30.0 0.0 4.7 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.12 gi|407465851|ref|YP_006776733.1| - 1.6e-14 52.5 0.5 6.5e-05 22.5 0.0 4.5 4 1 0 4 4 4 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|407465851|ref|YP_006776733.1| - 3.9e-12 45.8 0.9 0.011 15.5 0.0 4.5 3 1 1 4 4 4 3 Fis1 C-terminal tetratricopeptide repeat TPR_19 PF14559.1 gi|407465851|ref|YP_006776733.1| - 8e-11 42.1 0.4 0.00062 20.0 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|407465851|ref|YP_006776733.1| - 8.6e-11 41.6 0.2 9.6e-05 22.2 0.0 2.7 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|407465851|ref|YP_006776733.1| - 1.1e-10 41.8 0.0 1.8e-05 25.3 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|407465851|ref|YP_006776733.1| - 1.2e-10 40.7 3.0 0.021 14.9 0.0 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|407465851|ref|YP_006776733.1| - 2.6e-07 29.9 4.2 0.23 11.3 0.0 4.3 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|407465851|ref|YP_006776733.1| - 4.4e-07 29.9 0.0 0.6 10.8 0.0 4.2 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.1 gi|407465851|ref|YP_006776733.1| - 0.00041 20.1 0.0 0.17 11.7 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|407465851|ref|YP_006776733.1| - 0.00043 19.5 0.0 0.00094 18.4 0.0 1.6 1 1 0 1 1 1 1 Coatomer epsilon subunit TPR_6 PF13174.1 gi|407465851|ref|YP_006776733.1| - 0.00084 19.6 0.2 2.6 8.6 0.0 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.1 gi|407465851|ref|YP_006776733.1| - 0.0048 17.1 0.0 0.22 11.7 0.0 2.2 2 0 0 2 2 2 1 Alkyl sulfatase dimerisation Apc3 PF12895.2 gi|407465851|ref|YP_006776733.1| - 0.016 15.2 0.6 2 8.6 0.1 2.4 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.3 gi|407465851|ref|YP_006776733.1| - 0.033 12.9 0.0 0.11 11.2 0.0 1.7 1 1 1 2 2 2 0 NMDA receptor-regulated protein 1