# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HGTP_anticodon PF03129.20 gi|407463878|ref|YP_006774760.1| - 7.7e-17 61.2 0.2 2.1e-16 59.8 0.1 1.9 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|407463878|ref|YP_006774760.1| - 1.5e-10 41.3 0.1 6e-09 36.1 0.1 2.3 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) zf-RRPl_C4 PF17026.5 gi|407463878|ref|YP_006774760.1| - 0.04 14.0 0.9 0.13 12.4 0.1 2.2 3 0 0 3 3 3 0 Putative ribonucleoprotein zinc-finger pf C4 type Zn-ribbon_8 PF09723.10 gi|407463878|ref|YP_006774760.1| - 0.066 13.3 0.2 6.1 7.1 0.1 2.8 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|407463878|ref|YP_006774760.1| - 0.2 11.6 2.8 11 6.0 0.5 2.8 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|407463878|ref|YP_006774760.1| - 0.21 12.4 1.7 0.75 10.6 1.2 2.1 1 1 1 2 2 2 0 zinc-ribbon family zinc_ribbon_5 PF13719.6 gi|407463878|ref|YP_006774760.1| - 5.1 6.9 5.9 15 5.5 0.5 3.0 3 0 0 3 3 3 0 zinc-ribbon domain AP_endonuc_2 PF01261.24 gi|407463879|ref|YP_006774761.1| - 9.2e-36 123.3 0.0 1.3e-35 122.8 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DNA_primase_lrg PF04104.14 gi|407463880|ref|YP_006774762.1| - 7.3e-26 91.1 0.0 2e-25 89.7 0.0 1.7 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Med5 PF08689.10 gi|407463880|ref|YP_006774762.1| - 0.006 14.5 0.1 0.0066 14.3 0.1 1.0 1 0 0 1 1 1 1 Mediator complex subunit Med5 DNA_primase_S PF01896.19 gi|407463881|ref|YP_006774763.1| - 4.3e-17 62.7 1.6 4.8e-16 59.3 0.1 2.3 2 0 0 2 2 2 1 DNA primase small subunit PolC_DP2 PF03833.13 gi|407463881|ref|YP_006774763.1| - 0.072 11.0 3.5 0.1 10.5 3.5 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 HypA PF01155.19 gi|407463881|ref|YP_006774763.1| - 4 7.5 8.4 21 5.2 8.4 2.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA UPF0182 PF03699.13 gi|407463882|ref|YP_006774764.1| - 4.4e-33 114.4 16.7 1.9e-31 109.0 16.7 2.7 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0182) DUF4271 PF14093.6 gi|407463882|ref|YP_006774764.1| - 3.3 7.6 10.2 2.3 8.1 3.3 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4271) GATase PF00117.28 gi|407463883|ref|YP_006774765.1| - 1.9e-19 70.2 0.0 2.2e-19 70.0 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|407463883|ref|YP_006774765.1| - 7.1e-09 35.7 0.0 3.2e-07 30.3 0.0 2.1 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.19 gi|407463883|ref|YP_006774765.1| - 0.06 13.2 0.1 0.36 10.7 0.1 2.0 1 1 0 1 1 1 0 SNO glutamine amidotransferase family TPR_1 PF00515.28 gi|407463884|ref|YP_006774766.1| - 4.4e-16 57.9 16.4 1.9e-09 36.9 0.3 4.4 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407463884|ref|YP_006774766.1| - 1.3e-14 53.0 10.8 3.8e-07 29.7 0.1 4.5 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407463884|ref|YP_006774766.1| - 2.3e-11 42.9 14.7 3e-07 30.1 0.1 4.9 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407463884|ref|YP_006774766.1| - 1.1e-10 41.7 0.0 1.3e-05 25.4 0.0 2.8 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|407463884|ref|YP_006774766.1| - 2.8e-10 39.9 9.9 2.1e-05 24.6 1.1 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|407463884|ref|YP_006774766.1| - 1.1e-09 37.8 7.5 2e-05 24.2 0.5 3.8 1 1 1 3 3 3 3 TPR repeat TPR_19 PF14559.6 gi|407463884|ref|YP_006774766.1| - 2.2e-08 34.5 1.0 2e-05 25.0 0.0 2.8 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407463884|ref|YP_006774766.1| - 4.2e-08 33.3 0.0 0.0032 18.2 0.0 3.5 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|407463884|ref|YP_006774766.1| - 1.1e-06 28.7 0.0 4.3e-05 23.6 0.0 2.5 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|407463884|ref|YP_006774766.1| - 5.2e-05 23.6 3.0 2.6 8.9 0.0 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|407463884|ref|YP_006774766.1| - 0.0005 19.8 0.1 0.012 15.4 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|407463884|ref|YP_006774766.1| - 0.001 19.7 0.1 0.37 11.5 0.0 2.8 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|407463884|ref|YP_006774766.1| - 0.0022 17.9 0.0 0.056 13.5 0.0 2.9 3 0 0 3 3 2 1 Tetratricopeptide repeat Peptidase_C39_2 PF13529.6 gi|407463884|ref|YP_006774766.1| - 0.003 18.1 0.2 0.0094 16.5 0.0 1.9 2 1 0 2 2 2 1 Peptidase_C39 like family ANAPC3 PF12895.7 gi|407463884|ref|YP_006774766.1| - 0.0079 16.4 1.9 0.86 9.9 0.6 2.4 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 Mad3_BUB1_I_2 PF17014.5 gi|407463884|ref|YP_006774766.1| - 0.12 12.5 2.3 0.31 11.2 2.3 1.7 1 0 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein DUF3560 PF12083.8 gi|407463884|ref|YP_006774766.1| - 0.28 11.3 2.4 2.6 8.2 1.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3560) zinc_ribbon_4 PF13717.6 gi|407463885|ref|YP_006774767.1| - 0.00052 19.9 2.8 0.0032 17.4 2.8 2.0 1 1 0 1 1 1 1 zinc-ribbon domain IBR PF01485.21 gi|407463885|ref|YP_006774767.1| - 0.0039 17.4 1.0 0.0039 17.4 1.0 1.4 2 0 0 2 2 2 1 IBR domain, a half RING-finger domain CpXC PF14353.6 gi|407463885|ref|YP_006774767.1| - 0.0069 16.4 2.2 0.032 14.3 0.0 2.0 1 1 1 2 2 2 1 CpXC protein OrfB_Zn_ribbon PF07282.11 gi|407463885|ref|YP_006774767.1| - 0.0095 15.8 0.3 0.011 15.6 0.3 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain YacG PF03884.14 gi|407463885|ref|YP_006774767.1| - 0.016 14.9 0.3 2.6 7.8 0.0 2.2 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG Ogr_Delta PF04606.12 gi|407463885|ref|YP_006774767.1| - 0.032 14.2 0.5 7.7 6.6 0.1 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-H2C2_5 PF13909.6 gi|407463885|ref|YP_006774767.1| - 0.042 13.6 0.2 0.042 13.6 0.2 2.1 2 0 0 2 2 2 0 C2H2-type zinc-finger domain HypA PF01155.19 gi|407463885|ref|YP_006774767.1| - 0.052 13.6 0.3 0.053 13.5 0.3 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ribosomal_S27e PF01667.17 gi|407463885|ref|YP_006774767.1| - 0.052 13.3 2.8 0.15 11.8 2.8 1.7 1 1 0 1 1 1 0 Ribosomal protein S27 Zn_Tnp_IS91 PF14319.6 gi|407463885|ref|YP_006774767.1| - 0.078 13.0 0.2 0.083 12.9 0.2 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain UPF0547 PF10571.9 gi|407463885|ref|YP_006774767.1| - 0.25 11.5 5.2 4.7 7.4 0.6 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-Di19 PF05605.12 gi|407463885|ref|YP_006774767.1| - 0.26 11.6 3.5 0.73 10.2 0.5 2.0 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-ribbon_3 PF13248.6 gi|407463885|ref|YP_006774767.1| - 0.3 10.5 6.8 4.9 6.7 6.8 2.1 1 1 0 1 1 1 0 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|407463885|ref|YP_006774767.1| - 0.33 10.9 4.6 0.83 9.7 0.1 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zf-RING_7 PF02591.15 gi|407463885|ref|YP_006774767.1| - 0.33 11.2 3.7 4.5 7.6 0.1 2.3 2 0 0 2 2 2 0 C4-type zinc ribbon domain zinc_ribbon_5 PF13719.6 gi|407463885|ref|YP_006774767.1| - 0.44 10.3 3.3 1.1 9.0 3.3 1.6 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_9 PF14369.6 gi|407463885|ref|YP_006774767.1| - 0.76 10.1 6.5 24 5.3 6.9 2.2 1 1 1 2 2 2 0 zinc-ribbon Zn-ribbon_8 PF09723.10 gi|407463885|ref|YP_006774767.1| - 1.2 9.3 5.5 13 6.0 5.6 2.1 1 1 1 2 2 2 0 Zinc ribbon domain Ribosomal_S6e PF01092.19 gi|407463886|ref|YP_006774768.1| - 4.6e-26 91.2 0.1 5.6e-26 91.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.27 gi|407463887|ref|YP_006774769.1| - 5.6e-31 107.6 0.1 1.7e-30 106.0 0.1 1.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|407463887|ref|YP_006774769.1| - 1.3e-26 92.7 0.7 1.3e-25 89.4 0.2 2.6 2 0 0 2 2 2 1 Initiation factor eIF2 gamma, C terminal MMR_HSR1 PF01926.23 gi|407463887|ref|YP_006774769.1| - 3.4e-05 23.9 0.0 0.00014 22.0 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 gi|407463887|ref|YP_006774769.1| - 8.9e-05 22.8 0.9 0.00021 21.6 0.4 1.9 2 0 0 2 2 2 1 Elongation factor Tu domain 2 RsgA_GTPase PF03193.16 gi|407463887|ref|YP_006774769.1| - 0.00021 21.2 0.4 0.0054 16.6 0.1 2.3 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1_Xtn PF16897.5 gi|407463887|ref|YP_006774769.1| - 0.01 15.9 0.0 0.027 14.5 0.0 1.7 1 1 0 1 1 1 0 C-terminal region of MMR_HSR1 domain FeoB_N PF02421.18 gi|407463887|ref|YP_006774769.1| - 0.064 12.8 0.3 7.4 6.1 0.0 2.6 2 0 0 2 2 2 0 Ferrous iron transport protein B HypA PF01155.19 gi|407463887|ref|YP_006774769.1| - 0.14 12.2 0.1 0.29 11.2 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ILEI PF15711.5 gi|407463887|ref|YP_006774769.1| - 0.15 12.6 0.0 3.1 8.3 0.0 2.5 2 0 0 2 2 2 0 Interleukin-like EMT inducer PIN_9 PF18477.1 gi|407463888|ref|YP_006774770.1| - 7.7e-14 52.0 0.5 9e-14 51.8 0.5 1.0 1 0 0 1 1 1 1 PIN like domain Fcf1 PF04900.12 gi|407463888|ref|YP_006774770.1| - 1.5e-05 25.3 0.0 2.6e-05 24.5 0.0 1.4 1 1 0 1 1 1 1 Fcf1 PIN_4 PF13638.6 gi|407463888|ref|YP_006774770.1| - 7e-05 23.1 1.5 9.3e-05 22.7 1.5 1.2 1 0 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|407463888|ref|YP_006774770.1| - 0.001 19.6 5.1 0.0013 19.3 5.1 1.2 1 0 0 1 1 1 1 PIN domain PIN PF01850.21 gi|407463888|ref|YP_006774770.1| - 0.05 14.1 0.0 0.075 13.5 0.0 1.4 1 1 0 1 1 1 0 PIN domain PBP PF01161.20 gi|407463889|ref|YP_006774771.1| - 3.7e-34 117.9 0.0 4.3e-34 117.7 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Abi_2 PF07751.11 gi|407463889|ref|YP_006774771.1| - 0.14 12.4 0.1 0.2 11.9 0.1 1.2 1 0 0 1 1 1 0 Abi-like protein STT3 PF02516.14 gi|407463890|ref|YP_006774772.1| - 1.5e-29 103.3 46.6 8e-29 100.9 44.0 3.3 2 1 0 2 2 2 1 Oligosaccharyl transferase STT3 subunit Nop10p PF04135.12 gi|407463891|ref|YP_006774773.1| - 3e-23 81.6 5.0 3.1e-23 81.5 5.0 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|407463891|ref|YP_006774773.1| - 0.00037 20.0 1.2 0.00047 19.7 1.2 1.2 1 0 0 1 1 1 1 RecR protein PolC_DP2 PF03833.13 gi|407463891|ref|YP_006774773.1| - 0.0054 14.7 0.3 0.0054 14.7 0.3 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 Ribosomal_S27e PF01667.17 gi|407463891|ref|YP_006774773.1| - 0.034 13.9 3.8 0.63 9.8 0.3 2.1 1 1 1 2 2 2 0 Ribosomal protein S27 HypA PF01155.19 gi|407463891|ref|YP_006774773.1| - 0.15 12.1 1.4 0.18 11.8 1.4 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF35_N PF12172.8 gi|407463891|ref|YP_006774773.1| - 0.43 10.5 3.3 0.89 9.5 2.6 1.9 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) EIF_2_alpha PF07541.12 gi|407463892|ref|YP_006774774.1| - 1.2e-16 60.9 0.8 1.2e-16 60.9 0.8 1.9 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|407463892|ref|YP_006774774.1| - 3.5e-10 40.1 0.1 8.5e-10 38.8 0.1 1.7 1 0 0 1 1 1 1 S1 RNA binding domain S1_2 PF13509.6 gi|407463892|ref|YP_006774774.1| - 0.062 13.4 1.1 0.26 11.4 0.0 2.5 3 0 0 3 3 3 0 S1 domain Arm-DNA-bind_2 PF12167.8 gi|407463892|ref|YP_006774774.1| - 0.092 12.7 1.6 0.19 11.7 0.2 2.3 2 0 0 2 2 2 0 Arm DNA-binding domain CobA_CobO_BtuR PF02572.15 gi|407463893|ref|YP_006774775.1| - 1e-60 204.9 0.3 1.1e-60 204.8 0.3 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AAA_25 PF13481.6 gi|407463893|ref|YP_006774775.1| - 0.018 14.6 0.0 0.031 13.9 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|407463893|ref|YP_006774775.1| - 0.041 13.9 1.5 0.066 13.2 1.5 1.6 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|407463893|ref|YP_006774775.1| - 0.13 12.0 1.0 0.37 10.5 1.0 1.8 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|407463893|ref|YP_006774775.1| - 0.28 11.6 1.5 0.64 10.5 1.4 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CbiA PF01656.23 gi|407463893|ref|YP_006774775.1| - 0.74 9.9 3.4 7.3 6.7 1.0 2.2 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain GATase_3 PF07685.14 gi|407463894|ref|YP_006774776.1| - 1.1e-41 142.6 0.1 1.5e-41 142.1 0.1 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|407463894|ref|YP_006774776.1| - 2.4e-19 69.6 0.2 8.8e-19 67.8 0.0 2.0 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|407463894|ref|YP_006774776.1| - 2.2e-15 57.0 0.6 2.5e-12 47.0 0.5 2.9 2 1 0 2 2 2 1 AAA domain SNO PF01174.19 gi|407463894|ref|YP_006774776.1| - 8.5e-07 29.0 0.0 1.4e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 SNO glutamine amidotransferase family CTP_synth_N PF06418.14 gi|407463894|ref|YP_006774776.1| - 0.00023 20.6 2.8 0.00044 19.6 0.1 2.4 3 0 0 3 3 3 1 CTP synthase N-terminus ATLF PF07737.11 gi|407463894|ref|YP_006774776.1| - 0.0054 16.1 0.1 0.0054 16.1 0.1 2.1 2 1 0 2 2 2 1 Anthrax toxin lethal factor, N- and C-terminal domain Fer4_NifH PF00142.18 gi|407463894|ref|YP_006774776.1| - 0.064 12.7 0.3 0.17 11.3 0.1 1.8 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SRP54 PF00448.22 gi|407463894|ref|YP_006774776.1| - 0.089 12.4 0.1 1.6 8.3 0.1 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain CBP_BcsQ PF06564.12 gi|407463894|ref|YP_006774776.1| - 0.13 11.7 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsQ Beta_helix_2 PF18835.1 gi|407463894|ref|YP_006774776.1| - 0.16 11.8 0.1 0.39 10.5 0.1 1.6 1 0 0 1 1 1 0 Beta helix repeat of Inulin fructotransferase MobB PF03205.14 gi|407463894|ref|YP_006774776.1| - 0.18 11.7 1.4 0.4 10.6 0.0 2.2 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B DUF1611 PF07755.11 gi|407463894|ref|YP_006774776.1| - 0.23 10.7 0.3 2.4 7.4 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF1611_C) P-loop domain CbiC PF02570.15 gi|407463895|ref|YP_006774777.1| - 8.3e-72 241.0 0.6 9.4e-72 240.8 0.6 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase CbiX PF01903.17 gi|407463896|ref|YP_006774778.1| - 3.7e-34 117.3 0.0 2.8e-16 59.7 0.0 2.1 2 0 0 2 2 2 2 CbiX CbiK PF06180.11 gi|407463896|ref|YP_006774778.1| - 4.3e-07 29.5 2.4 5.7e-07 29.1 2.4 1.2 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|407463896|ref|YP_006774778.1| - 7.3e-05 22.0 0.0 0.011 14.9 0.0 2.0 1 1 0 1 1 1 1 Ferrochelatase Enolase_N PF03952.16 gi|407463896|ref|YP_006774778.1| - 1.5 9.0 4.5 1.8 8.8 0.6 2.5 2 1 1 3 3 3 0 Enolase, N-terminal domain CbiG_N PF11760.8 gi|407463897|ref|YP_006774779.1| - 1.6e-33 114.5 0.2 2.7e-33 113.8 0.2 1.4 1 0 0 1 1 1 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.16 gi|407463897|ref|YP_006774779.1| - 1e-26 93.8 0.3 1.9e-26 92.9 0.1 1.6 2 0 0 2 2 2 1 Cobalamin synthesis G C-terminus CbiG_mid PF11761.8 gi|407463897|ref|YP_006774779.1| - 8e-16 57.9 0.0 2.1e-15 56.6 0.0 1.7 2 0 0 2 2 2 1 Cobalamin biosynthesis central region SpoU_sub_bind PF08032.12 gi|407463897|ref|YP_006774779.1| - 0.087 13.1 0.0 0.41 11.0 0.0 2.1 2 0 0 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding CbiD PF01888.17 gi|407463898|ref|YP_006774780.1| - 2.1e-91 305.7 2.5 2.8e-91 305.3 2.5 1.2 1 0 0 1 1 1 1 CbiD DUF3042 PF11240.8 gi|407463898|ref|YP_006774780.1| - 0.1 12.6 2.0 0.45 10.6 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3042) NAD_binding_10 PF13460.6 gi|407463899|ref|YP_006774781.1| - 2.3e-13 50.4 0.0 3.1e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|407463899|ref|YP_006774781.1| - 2.7e-13 49.9 0.0 2.9e-12 46.6 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 gi|407463899|ref|YP_006774781.1| - 9.4e-08 31.5 0.0 0.0014 17.9 0.0 3.1 1 1 2 3 3 3 2 Male sterility protein 3Beta_HSD PF01073.19 gi|407463899|ref|YP_006774781.1| - 2.7e-07 29.9 1.5 3e-06 26.5 1.1 2.4 1 1 2 3 3 3 1 3-beta hydroxysteroid dehydrogenase/isomerase family NmrA PF05368.13 gi|407463899|ref|YP_006774781.1| - 1.9e-05 24.3 0.3 3.7e-05 23.4 0.3 1.4 1 1 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 gi|407463899|ref|YP_006774781.1| - 0.00028 20.1 0.0 0.018 14.1 0.0 2.1 1 1 1 2 2 2 1 RmlD substrate binding domain TPK_catalytic PF04263.16 gi|407463899|ref|YP_006774781.1| - 0.009 16.1 2.5 1.6 8.8 0.2 3.3 2 1 1 3 3 3 1 Thiamin pyrophosphokinase, catalytic domain DDE_Tnp_1_3 PF13612.6 gi|407463899|ref|YP_006774781.1| - 0.025 14.6 0.5 0.058 13.4 0.3 1.8 2 0 0 2 2 2 0 Transposase DDE domain Polysacc_synt_2 PF02719.15 gi|407463899|ref|YP_006774781.1| - 0.064 12.4 0.2 0.35 10.0 0.2 2.1 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 gi|407463899|ref|YP_006774781.1| - 0.087 12.2 0.0 0.17 11.3 0.0 1.6 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase PS_pyruv_trans PF04230.13 gi|407463899|ref|YP_006774781.1| - 0.09 12.7 3.3 0.036 14.0 0.9 1.6 2 0 0 2 2 2 0 Polysaccharide pyruvyl transferase S-AdoMet_synt_C PF02773.16 gi|407463900|ref|YP_006774782.1| - 2.4e-70 234.9 0.1 1.1e-69 232.8 0.0 1.9 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 gi|407463900|ref|YP_006774782.1| - 8.7e-49 164.8 0.2 3.1e-47 159.7 0.0 2.3 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 gi|407463900|ref|YP_006774782.1| - 5.4e-40 136.1 1.3 3.4e-39 133.5 0.2 2.6 3 0 0 3 3 3 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 gi|407463900|ref|YP_006774782.1| - 0.0013 17.7 2.6 0.4 9.4 0.4 2.3 1 1 1 2 2 2 2 S-adenosylmethionine synthetase (AdoMet synthetase) LSM PF01423.22 gi|407463901|ref|YP_006774783.1| - 5.6e-20 70.8 1.7 6.3e-20 70.6 1.7 1.0 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 gi|407463901|ref|YP_006774783.1| - 0.0095 15.6 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 1 Hfq protein BrnA_antitoxin PF14384.6 gi|407463901|ref|YP_006774783.1| - 0.065 13.7 0.2 0.12 12.8 0.2 1.4 1 0 0 1 1 1 0 BrnA antitoxin of type II toxin-antitoxin system Rad51 PF08423.11 gi|407463902|ref|YP_006774784.1| - 4e-25 88.5 0.1 4.5e-25 88.4 0.1 1.1 1 0 0 1 1 1 1 Rad51 ATPase PF06745.13 gi|407463902|ref|YP_006774784.1| - 2.7e-11 43.3 5.0 4.1e-10 39.4 5.0 2.1 1 1 0 1 1 1 1 KaiC RecA PF00154.21 gi|407463902|ref|YP_006774784.1| - 1.8e-08 34.2 0.1 2.2e-08 33.9 0.1 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_24 PF13479.6 gi|407463902|ref|YP_006774784.1| - 3.6e-07 30.1 0.1 6e-07 29.4 0.1 1.4 1 1 0 1 1 1 1 AAA domain Zot PF05707.12 gi|407463902|ref|YP_006774784.1| - 4.9e-05 23.1 0.1 6.2e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_25 PF13481.6 gi|407463902|ref|YP_006774784.1| - 0.00016 21.3 0.5 0.0035 17.0 0.5 2.2 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|407463902|ref|YP_006774784.1| - 0.012 15.6 2.3 0.017 15.0 2.3 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea DUF2075 PF09848.9 gi|407463902|ref|YP_006774784.1| - 0.032 13.5 0.6 0.064 12.5 0.5 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NB-ARC PF00931.22 gi|407463902|ref|YP_006774784.1| - 0.036 13.3 0.5 0.055 12.6 0.5 1.5 1 1 0 1 1 1 0 NB-ARC domain TrwB_AAD_bind PF10412.9 gi|407463902|ref|YP_006774784.1| - 0.09 11.7 0.1 0.16 10.9 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain CbiA PF01656.23 gi|407463902|ref|YP_006774784.1| - 0.092 12.8 0.5 0.16 12.0 0.5 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ABC_tran PF00005.27 gi|407463902|ref|YP_006774784.1| - 0.98 9.9 4.1 0.98 9.9 3.4 1.5 1 1 0 1 1 1 0 ABC transporter tRNA_anti-codon PF01336.25 gi|407463903|ref|YP_006774785.1| - 1.2e-11 44.5 0.2 0.01 15.8 0.0 3.7 4 0 0 4 4 4 3 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 gi|407463903|ref|YP_006774785.1| - 1.8e-08 34.4 0.0 8e-05 22.5 0.0 2.5 2 0 0 2 2 2 2 Cell division control protein 24, OB domain 3 POT1PC PF16686.5 gi|407463903|ref|YP_006774785.1| - 3.9e-05 23.6 0.0 0.72 9.7 0.0 3.1 3 0 0 3 3 3 2 ssDNA-binding domain of telomere protection protein DUF3460 PF11943.8 gi|407463903|ref|YP_006774785.1| - 0.2 11.9 1.7 0.31 11.3 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3460) ABC_tran PF00005.27 gi|407463904|ref|YP_006774786.1| - 4.2e-28 98.6 0.0 6.7e-28 97.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|407463904|ref|YP_006774786.1| - 1.3e-12 48.2 0.1 1e-06 28.8 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|407463904|ref|YP_006774786.1| - 8e-05 23.3 0.5 0.0003 21.4 0.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_15 PF13175.6 gi|407463904|ref|YP_006774786.1| - 0.00014 21.8 0.1 0.52 10.0 0.0 2.8 2 1 1 3 3 3 2 AAA ATPase domain AAA_29 PF13555.6 gi|407463904|ref|YP_006774786.1| - 0.011 15.5 0.6 0.021 14.5 0.6 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|407463904|ref|YP_006774786.1| - 0.014 15.9 0.2 0.014 15.9 0.2 2.5 2 1 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|407463904|ref|YP_006774786.1| - 0.021 14.2 0.0 0.036 13.5 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI SbcCD_C PF13558.6 gi|407463904|ref|YP_006774786.1| - 0.078 13.2 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 gi|407463904|ref|YP_006774786.1| - 0.11 11.9 0.3 13 5.1 0.0 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain MeaB PF03308.16 gi|407463904|ref|YP_006774786.1| - 0.21 10.6 0.1 0.34 9.9 0.1 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ABC2_membrane PF01061.24 gi|407463905|ref|YP_006774787.1| - 5.9e-22 78.1 20.3 5.9e-22 78.1 20.3 1.8 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|407463905|ref|YP_006774787.1| - 3.2e-15 56.1 25.4 3.2e-15 56.1 25.4 2.0 1 1 1 2 2 2 2 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|407463905|ref|YP_006774787.1| - 0.0027 17.0 16.5 0.0042 16.4 16.5 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein DUF3493 PF11998.8 gi|407463905|ref|YP_006774787.1| - 0.14 12.3 0.8 0.36 11.0 0.0 2.1 2 0 0 2 2 2 0 Low psii accumulation1 / Rep27 ABC2_membrane_4 PF12730.7 gi|407463905|ref|YP_006774787.1| - 0.68 9.9 18.0 0.021 14.8 10.1 2.1 2 1 0 2 2 2 0 ABC-2 family transporter protein TrkA_N PF02254.18 gi|407463906|ref|YP_006774788.1| - 0.00017 21.8 0.0 0.00033 20.9 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 gi|407463906|ref|YP_006774788.1| - 0.0002 21.0 0.1 0.039 13.5 0.0 2.3 1 1 0 2 2 2 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|407463906|ref|YP_006774788.1| - 0.00029 21.0 0.0 0.00067 19.8 0.0 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 gi|407463906|ref|YP_006774788.1| - 0.17 12.1 0.0 0.88 9.7 0.0 2.0 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase DUF354 PF04007.12 gi|407463907|ref|YP_006774789.1| - 5.9e-44 150.5 6.9 7.1e-44 150.3 6.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) LpxB PF02684.15 gi|407463907|ref|YP_006774789.1| - 0.0003 19.8 0.1 0.00062 18.7 0.1 1.5 1 1 0 1 1 1 1 Lipid-A-disaccharide synthetase KH_5 PF13184.6 gi|407463907|ref|YP_006774789.1| - 0.16 12.1 3.7 6.2 7.0 2.2 3.4 2 1 0 2 2 2 0 NusA-like KH domain DUF3783 PF12646.7 gi|407463908|ref|YP_006774790.1| - 0.081 12.9 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3783) GrpE PF01025.19 gi|407463909|ref|YP_006774791.1| - 7.5e-38 129.8 4.2 9.1e-38 129.5 4.2 1.0 1 0 0 1 1 1 1 GrpE DUF4763 PF15960.5 gi|407463909|ref|YP_006774791.1| - 0.016 14.5 3.4 0.022 14.1 3.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) DUF3890 PF13029.6 gi|407463909|ref|YP_006774791.1| - 0.55 10.7 5.2 0.84 10.1 2.0 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF3890) HSP70 PF00012.20 gi|407463910|ref|YP_006774792.1| - 5.4e-214 711.8 17.3 2.7e-194 646.8 13.3 2.0 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 gi|407463910|ref|YP_006774792.1| - 4.3e-18 65.2 5.8 4.3e-18 65.2 5.8 2.4 2 1 0 2 2 2 1 MreB/Mbl protein Collagen PF01391.18 gi|407463910|ref|YP_006774792.1| - 0.00096 18.9 10.0 0.0017 18.0 10.0 1.3 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) FGGY_C PF02782.16 gi|407463910|ref|YP_006774792.1| - 0.0089 15.8 0.1 0.018 14.8 0.1 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DnaJ_C PF01556.18 gi|407463911|ref|YP_006774793.1| - 2e-38 131.8 0.4 2.6e-38 131.4 0.4 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|407463911|ref|YP_006774793.1| - 8e-26 90.0 2.2 1.4e-25 89.2 2.2 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|407463911|ref|YP_006774793.1| - 1.1e-14 54.5 17.7 2.2e-14 53.5 17.7 1.5 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|407463911|ref|YP_006774793.1| - 0.0029 17.5 16.6 0.25 11.3 3.9 3.4 1 1 2 3 3 3 3 Tryptophan RNA-binding attenuator protein inhibitory protein NT5C PF06941.12 gi|407463912|ref|YP_006774794.1| - 9.4e-13 48.4 1.2 1.3e-12 48.0 1.2 1.1 1 0 0 1 1 1 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) GH115_C PF17829.1 gi|407463912|ref|YP_006774794.1| - 0.092 12.6 0.1 0.13 12.1 0.1 1.4 1 1 0 1 1 1 0 Gylcosyl hydrolase family 115 C-terminal domain NIF PF03031.18 gi|407463912|ref|YP_006774794.1| - 0.11 12.3 2.0 0.22 11.3 2.0 1.8 1 1 0 1 1 1 0 NLI interacting factor-like phosphatase zf-LITAF-like PF10601.9 gi|407463913|ref|YP_006774795.1| - 0.041 14.2 0.1 0.064 13.5 0.1 1.3 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Asparaginase PF00710.20 gi|407463914|ref|YP_006774796.1| - 4.7e-52 176.3 0.1 7e-52 175.8 0.1 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|407463914|ref|YP_006774796.1| - 1.3e-28 99.5 0.0 8.3e-28 96.9 0.0 2.3 3 0 0 3 3 3 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|407463914|ref|YP_006774796.1| - 6.1e-18 63.9 2.1 6.1e-18 63.9 2.1 3.1 4 0 0 4 4 4 1 GatD N-terminal domain AAA PF00004.29 gi|407463915|ref|YP_006774797.1| - 1.3e-99 329.7 0.0 3e-49 166.8 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.18 gi|407463915|ref|YP_006774797.1| - 1e-29 102.6 0.2 3.1e-29 101.0 0.2 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_lid_3 PF17862.1 gi|407463915|ref|YP_006774797.1| - 5.5e-20 70.9 0.1 1.5e-10 40.7 0.0 2.6 2 0 0 2 2 2 2 AAA+ lid domain AAA_2 PF07724.14 gi|407463915|ref|YP_006774797.1| - 7.2e-16 58.8 0.0 3.9e-07 30.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|407463915|ref|YP_006774797.1| - 1.4e-15 58.1 0.1 6.5e-06 26.6 0.1 3.2 2 2 0 2 2 2 2 AAA ATPase domain RuvB_N PF05496.12 gi|407463915|ref|YP_006774797.1| - 1.6e-14 54.0 0.0 7.7e-09 35.5 0.0 2.7 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|407463915|ref|YP_006774797.1| - 1.2e-10 41.7 0.4 0.0025 18.1 0.0 3.9 2 2 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|407463915|ref|YP_006774797.1| - 2.5e-10 40.1 1.1 0.00014 21.2 0.0 2.8 3 0 0 3 3 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|407463915|ref|YP_006774797.1| - 6.4e-10 39.3 0.0 0.0017 18.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|407463915|ref|YP_006774797.1| - 1.8e-09 37.7 0.6 0.0012 18.9 0.1 3.9 3 2 0 3 3 2 2 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|407463915|ref|YP_006774797.1| - 8.1e-09 35.6 0.0 0.0012 18.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain CDC48_2 PF02933.17 gi|407463915|ref|YP_006774797.1| - 1.7e-08 34.1 0.0 3.8e-08 33.0 0.0 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 IstB_IS21 PF01695.17 gi|407463915|ref|YP_006774797.1| - 7.6e-08 32.3 0.0 0.0075 16.0 0.0 2.3 2 0 0 2 2 2 2 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|407463915|ref|YP_006774797.1| - 2.2e-07 30.7 0.1 0.039 13.6 0.0 3.1 2 1 0 2 2 2 2 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|407463915|ref|YP_006774797.1| - 1.5e-06 28.6 0.0 0.045 14.1 0.0 2.7 2 0 0 2 2 2 2 RNA helicase Bac_DnaA PF00308.18 gi|407463915|ref|YP_006774797.1| - 1.7e-06 28.1 0.0 0.0027 17.6 0.0 2.6 3 0 0 3 3 2 1 Bacterial dnaA protein AAA_7 PF12775.7 gi|407463915|ref|YP_006774797.1| - 3e-06 26.9 0.0 0.035 13.6 0.0 2.7 2 0 0 2 2 2 2 P-loop containing dynein motor region TsaE PF02367.17 gi|407463915|ref|YP_006774797.1| - 3.1e-06 27.2 0.1 0.094 12.7 0.0 2.7 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 gi|407463915|ref|YP_006774797.1| - 3.5e-06 27.4 0.0 0.026 14.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|407463915|ref|YP_006774797.1| - 4.1e-06 27.4 0.0 0.029 14.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain ATPase PF06745.13 gi|407463915|ref|YP_006774797.1| - 5.1e-06 26.0 2.0 0.11 11.8 0.0 3.8 3 1 1 4 4 4 2 KaiC Mg_chelatase PF01078.21 gi|407463915|ref|YP_006774797.1| - 7.1e-06 25.5 0.8 0.039 13.3 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|407463915|ref|YP_006774797.1| - 8.9e-06 25.6 0.0 0.035 13.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|407463915|ref|YP_006774797.1| - 2.5e-05 23.8 0.2 0.22 10.9 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein ATPase_2 PF01637.18 gi|407463915|ref|YP_006774797.1| - 6.3e-05 23.0 0.0 0.063 13.2 0.0 3.4 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|407463915|ref|YP_006774797.1| - 7e-05 23.4 0.0 0.68 10.5 0.0 2.7 2 0 0 2 2 2 2 ABC transporter NACHT PF05729.12 gi|407463915|ref|YP_006774797.1| - 7.5e-05 22.7 0.1 0.68 9.8 0.0 3.3 4 0 0 4 4 4 2 NACHT domain NB-ARC PF00931.22 gi|407463915|ref|YP_006774797.1| - 0.00011 21.6 0.0 0.44 9.7 0.0 2.9 3 0 0 3 3 3 2 NB-ARC domain DUF815 PF05673.13 gi|407463915|ref|YP_006774797.1| - 0.00013 21.2 0.0 0.11 11.7 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Zeta_toxin PF06414.12 gi|407463915|ref|YP_006774797.1| - 0.00014 21.2 0.8 0.15 11.3 0.0 3.1 3 0 0 3 3 3 1 Zeta toxin AAA_3 PF07726.11 gi|407463915|ref|YP_006774797.1| - 0.00062 19.6 0.0 0.51 10.2 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|407463915|ref|YP_006774797.1| - 0.00063 19.5 0.2 1.6 8.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain Cytidylate_kin PF02224.18 gi|407463915|ref|YP_006774797.1| - 0.0007 19.4 0.1 0.68 9.6 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase DUF2075 PF09848.9 gi|407463915|ref|YP_006774797.1| - 0.001 18.4 0.0 0.39 9.9 0.0 2.4 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) Parvo_NS1 PF01057.17 gi|407463915|ref|YP_006774797.1| - 0.0015 17.7 0.0 0.31 10.1 0.0 2.2 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 gi|407463915|ref|YP_006774797.1| - 0.0017 18.0 6.6 1.3 8.5 0.2 3.9 2 2 1 3 3 3 1 AAA domain AAA_11 PF13086.6 gi|407463915|ref|YP_006774797.1| - 0.0025 17.6 0.0 0.69 9.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain Sigma54_activ_2 PF14532.6 gi|407463915|ref|YP_006774797.1| - 0.0049 17.0 0.0 2.5 8.2 0.0 2.6 2 0 0 2 2 2 1 Sigma-54 interaction domain NTPase_1 PF03266.15 gi|407463915|ref|YP_006774797.1| - 0.0094 15.9 1.8 10 6.0 0.0 4.1 3 1 1 4 4 4 0 NTPase CPT PF07931.12 gi|407463915|ref|YP_006774797.1| - 0.0098 15.7 0.0 1 9.2 0.0 2.5 2 0 0 2 2 2 1 Chloramphenicol phosphotransferase-like protein AAA_29 PF13555.6 gi|407463915|ref|YP_006774797.1| - 0.013 15.2 0.2 2.9 7.7 0.1 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain ResIII PF04851.15 gi|407463915|ref|YP_006774797.1| - 0.014 15.4 0.0 3.9 7.4 0.0 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit TniB PF05621.11 gi|407463915|ref|YP_006774797.1| - 0.014 14.8 0.0 4.7 6.6 0.0 2.8 3 0 0 3 3 2 0 Bacterial TniB protein Guanylate_kin PF00625.21 gi|407463915|ref|YP_006774797.1| - 0.016 14.9 0.1 12 5.6 0.0 3.6 3 1 1 4 4 3 0 Guanylate kinase AAA_19 PF13245.6 gi|407463915|ref|YP_006774797.1| - 0.018 15.3 2.0 4 7.8 0.1 3.6 3 1 1 4 4 3 0 AAA domain ATP-synt_ab PF00006.25 gi|407463915|ref|YP_006774797.1| - 0.018 14.7 0.0 6.4 6.4 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_17 PF13207.6 gi|407463915|ref|YP_006774797.1| - 0.023 15.1 0.0 1.2 9.5 0.0 2.8 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|407463915|ref|YP_006774797.1| - 0.032 13.3 0.0 8 5.4 0.0 2.3 2 0 0 2 2 2 0 Type II/IV secretion system protein Viral_helicase1 PF01443.18 gi|407463915|ref|YP_006774797.1| - 0.051 13.3 0.0 2 8.1 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AFG1_ATPase PF03969.16 gi|407463915|ref|YP_006774797.1| - 0.054 12.4 0.0 8.4 5.2 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase PduV-EutP PF10662.9 gi|407463915|ref|YP_006774797.1| - 0.071 12.9 0.0 19 5.0 0.0 2.7 3 0 0 3 3 2 0 Ethanolamine utilisation - propanediol utilisation PIF1 PF05970.14 gi|407463915|ref|YP_006774797.1| - 0.087 12.0 0.0 9.3 5.3 0.0 2.3 2 0 0 2 2 2 0 PIF1-like helicase Vps4_C PF09336.10 gi|407463915|ref|YP_006774797.1| - 0.1 12.6 2.0 7.8 6.6 0.2 3.1 3 0 0 3 3 2 0 Vps4 C terminal oligomerisation domain Rad17 PF03215.15 gi|407463915|ref|YP_006774797.1| - 0.12 12.3 0.0 44 3.9 0.0 3.1 2 1 1 3 3 3 0 Rad17 P-loop domain IPT PF01745.16 gi|407463915|ref|YP_006774797.1| - 0.18 11.2 0.2 13 5.1 0.0 2.4 2 0 0 2 2 2 0 Isopentenyl transferase Torsin PF06309.11 gi|407463915|ref|YP_006774797.1| - 0.22 11.6 0.1 13 5.9 0.0 2.4 2 0 0 2 2 2 0 Torsin Ribosomal_L2_C PF03947.18 gi|407463916|ref|YP_006774798.1| - 5.7e-36 123.5 2.6 1.5e-35 122.1 2.7 1.7 2 0 0 2 2 2 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|407463916|ref|YP_006774798.1| - 4.5e-08 32.9 0.0 1.3e-07 31.5 0.0 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Acylphosphatase PF00708.18 gi|407463917|ref|YP_006774799.1| - 3.7e-15 56.1 0.1 3.9e-15 56.0 0.1 1.0 1 0 0 1 1 1 1 Acylphosphatase ATP_bind_3 PF01171.20 gi|407463919|ref|YP_006774801.1| - 4.5e-20 72.2 0.0 7.2e-20 71.5 0.0 1.3 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.16 gi|407463919|ref|YP_006774801.1| - 3e-05 23.0 0.0 5.3e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase PAPS_reduct PF01507.19 gi|407463919|ref|YP_006774801.1| - 0.0043 17.1 0.0 0.0094 16.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.17 gi|407463919|ref|YP_006774801.1| - 0.041 13.0 0.1 0.066 12.3 0.1 1.3 1 0 0 1 1 1 0 NAD synthase QueH PF02677.14 gi|407463919|ref|YP_006774801.1| - 0.1 12.7 5.2 0.23 11.5 0.0 2.8 2 1 1 3 3 3 0 Epoxyqueuosine reductase QueH C1_2 PF03107.16 gi|407463919|ref|YP_006774801.1| - 1.5 9.2 16.3 1 9.8 3.2 3.5 3 0 0 3 3 3 0 C1 domain RecR PF02132.15 gi|407463919|ref|YP_006774801.1| - 9.8 5.8 22.8 0.78 9.4 5.2 4.3 4 1 0 4 4 4 0 RecR protein Peptidase_M50 PF02163.22 gi|407463920|ref|YP_006774802.1| - 6.3e-19 68.2 2.7 1.8e-08 34.0 1.4 2.4 1 1 1 2 2 2 2 Peptidase family M50 PDZ_2 PF13180.6 gi|407463920|ref|YP_006774802.1| - 9.4e-09 35.5 0.0 3.5e-08 33.7 0.0 1.8 1 1 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 gi|407463920|ref|YP_006774802.1| - 1.2e-07 31.5 0.0 2.2e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|407463920|ref|YP_006774802.1| - 0.0051 17.1 0.2 0.012 15.9 0.2 1.5 1 0 0 1 1 1 1 PDZ domain Plug PF07715.15 gi|407463920|ref|YP_006774802.1| - 0.064 13.8 0.1 0.14 12.7 0.1 1.5 1 0 0 1 1 1 0 TonB-dependent Receptor Plug Domain eRF1_1 PF03463.15 gi|407463921|ref|YP_006774803.1| - 3.8e-20 72.2 0.5 4.7e-20 71.9 0.5 1.0 1 0 0 1 1 1 1 eRF1 domain 1 UPF0047 PF01894.17 gi|407463923|ref|YP_006774805.1| - 1.5e-35 121.8 0.0 1.7e-35 121.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 Fe_dep_repr_C PF02742.15 gi|407463925|ref|YP_006774807.1| - 2.4e-18 66.0 0.4 4.6e-18 65.1 0.4 1.5 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|407463925|ref|YP_006774807.1| - 2.6e-14 53.1 0.1 4.6e-14 52.3 0.1 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 gi|407463925|ref|YP_006774807.1| - 3.8e-05 23.5 0.0 6.1e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|407463925|ref|YP_006774807.1| - 0.00014 22.3 0.0 0.00023 21.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|407463925|ref|YP_006774807.1| - 0.00019 21.7 0.1 0.00042 20.6 0.1 1.6 2 0 0 2 2 2 1 Transcriptional regulator MarR_2 PF12802.7 gi|407463925|ref|YP_006774807.1| - 0.00067 19.5 0.0 0.0011 18.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_1 PF00126.27 gi|407463925|ref|YP_006774807.1| - 0.0018 18.2 0.0 0.0043 17.0 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family TrmB PF01978.19 gi|407463925|ref|YP_006774807.1| - 0.0027 17.5 0.1 0.0049 16.7 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|407463925|ref|YP_006774807.1| - 0.0039 17.1 0.1 0.0057 16.6 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_Crp_2 PF13545.6 gi|407463925|ref|YP_006774807.1| - 0.005 16.8 0.0 0.0095 15.9 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|407463925|ref|YP_006774807.1| - 0.0076 16.1 0.4 0.018 14.9 0.0 1.8 2 1 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_37 PF13744.6 gi|407463925|ref|YP_006774807.1| - 0.044 13.7 0.3 0.11 12.5 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain IF2_N PF04760.15 gi|407463925|ref|YP_006774807.1| - 0.056 13.3 0.4 0.17 11.8 0.2 1.9 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region NLPC_P60 PF00877.19 gi|407463925|ref|YP_006774807.1| - 0.11 12.6 0.0 0.23 11.5 0.0 1.6 2 0 0 2 2 2 0 NlpC/P60 family HTH_6 PF01418.17 gi|407463925|ref|YP_006774807.1| - 0.11 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family TrmB PF01978.19 gi|407463926|ref|YP_006774808.1| - 6.4e-22 77.2 0.0 1.6e-21 75.9 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|407463926|ref|YP_006774808.1| - 5.7e-06 26.0 0.0 0.00013 21.6 0.0 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain Regulator_TrmB PF11495.8 gi|407463926|ref|YP_006774808.1| - 3.4e-05 23.1 0.0 4.1e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_24 PF13412.6 gi|407463926|ref|YP_006774808.1| - 0.0016 17.9 0.0 0.0037 16.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|407463926|ref|YP_006774808.1| - 0.013 16.0 0.0 0.05 14.1 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain Penicillinase_R PF03965.16 gi|407463926|ref|YP_006774808.1| - 0.017 15.5 0.1 0.059 13.7 0.0 1.9 2 0 0 2 2 2 0 Penicillinase repressor MarR PF01047.22 gi|407463926|ref|YP_006774808.1| - 0.017 15.0 0.0 0.038 13.9 0.0 1.6 1 0 0 1 1 1 0 MarR family MarR_2 PF12802.7 gi|407463926|ref|YP_006774808.1| - 0.024 14.5 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.20 gi|407463926|ref|YP_006774808.1| - 0.073 13.4 0.0 0.19 12.1 0.0 1.8 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.11 gi|407463926|ref|YP_006774808.1| - 0.079 13.1 0.0 0.2 11.8 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain PheRS_DBD3 PF18553.1 gi|407463926|ref|YP_006774808.1| - 0.082 13.2 0.1 0.32 11.3 0.1 2.1 1 1 0 1 1 1 0 PheRS DNA binding domain 3 PadR PF03551.14 gi|407463926|ref|YP_006774808.1| - 0.12 12.3 0.0 0.27 11.2 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Radical_SAM PF04055.21 gi|407463927|ref|YP_006774809.1| - 7.6e-15 55.7 0.2 7.6e-15 55.7 0.2 2.6 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|407463927|ref|YP_006774809.1| - 4.1e-06 27.1 0.0 1.2e-05 25.6 0.0 1.8 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|407463927|ref|YP_006774809.1| - 7e-06 26.2 0.0 7e-06 26.2 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain Porphyrn_cat_1 PF18206.1 gi|407463928|ref|YP_006774810.1| - 0.04 14.5 0.1 0.055 14.1 0.1 1.3 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 Glycos_transf_1 PF00534.20 gi|407463929|ref|YP_006774811.1| - 2.6e-07 30.3 0.0 3e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|407463929|ref|YP_006774811.1| - 0.0022 18.4 0.0 0.0029 18.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 RmlD_sub_bind PF04321.17 gi|407463930|ref|YP_006774812.1| - 4.8e-35 121.1 0.0 2.5e-31 108.8 0.0 2.0 1 1 1 2 2 2 2 RmlD substrate binding domain Epimerase PF01370.21 gi|407463930|ref|YP_006774812.1| - 7.9e-24 84.4 0.0 8.7e-23 81.0 0.0 2.1 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|407463930|ref|YP_006774812.1| - 2.3e-14 53.5 0.0 4.1e-13 49.4 0.0 2.2 1 1 1 3 3 3 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|407463930|ref|YP_006774812.1| - 1.5e-10 40.7 0.4 2.2e-08 33.6 0.1 2.3 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|407463930|ref|YP_006774812.1| - 2.4e-09 36.6 0.1 4.7e-09 35.6 0.0 1.5 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|407463930|ref|YP_006774812.1| - 2.4e-08 33.4 0.1 1.9e-07 30.6 0.0 2.3 2 1 0 2 2 2 1 Male sterility protein adh_short PF00106.25 gi|407463930|ref|YP_006774812.1| - 0.01 15.3 0.1 0.028 13.9 0.1 1.6 1 1 0 1 1 1 0 short chain dehydrogenase adh_short_C2 PF13561.6 gi|407463930|ref|YP_006774812.1| - 0.046 13.3 0.0 0.064 12.8 0.0 1.2 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Epimerase_2 PF02350.19 gi|407463931|ref|YP_006774813.1| - 7.2e-95 317.8 0.0 8.5e-95 317.5 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Polysacc_synt_2 PF02719.15 gi|407463932|ref|YP_006774814.1| - 4.2e-100 334.7 0.3 5.1e-100 334.4 0.3 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.21 gi|407463932|ref|YP_006774814.1| - 1.7e-22 80.0 0.0 2e-21 76.6 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|407463932|ref|YP_006774814.1| - 1.5e-16 60.2 0.2 3.2e-16 59.1 0.2 1.5 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 gi|407463932|ref|YP_006774814.1| - 1.5e-12 47.6 0.0 2.4e-12 46.9 0.0 1.7 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 gi|407463932|ref|YP_006774814.1| - 2.3e-10 40.1 0.0 7e-10 38.5 0.0 1.7 1 1 1 2 2 2 1 Male sterility protein NAD_binding_10 PF13460.6 gi|407463932|ref|YP_006774814.1| - 2.2e-09 37.5 0.0 3.8e-09 36.7 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|407463932|ref|YP_006774814.1| - 3.7e-09 36.1 0.0 1.4e-07 31.0 0.0 2.2 1 1 0 1 1 1 1 RmlD substrate binding domain adh_short PF00106.25 gi|407463932|ref|YP_006774814.1| - 1.4e-07 31.1 0.0 2.4e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|407463932|ref|YP_006774814.1| - 6.1e-06 26.3 0.0 9.9e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 KR domain NmrA PF05368.13 gi|407463932|ref|YP_006774814.1| - 0.0015 18.2 0.1 0.0025 17.4 0.1 1.4 1 0 0 1 1 1 1 NmrA-like family Shikimate_DH PF01488.20 gi|407463932|ref|YP_006774814.1| - 0.0015 18.6 0.7 0.0054 16.8 0.1 2.2 2 1 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Polysacc_syn_2C PF08485.10 gi|407463932|ref|YP_006774814.1| - 0.0042 16.7 0.2 0.012 15.3 0.2 1.8 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein C-terminal Semialdhyde_dh PF01118.24 gi|407463932|ref|YP_006774814.1| - 0.022 15.2 0.0 0.58 10.6 0.0 2.5 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|407463932|ref|YP_006774814.1| - 0.024 15.2 0.5 0.41 11.3 0.1 2.9 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Glycos_transf_2 PF00535.26 gi|407463933|ref|YP_006774815.1| - 4.5e-33 114.4 0.3 7.2e-33 113.8 0.3 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|407463933|ref|YP_006774815.1| - 7.8e-18 64.9 1.3 9.8e-18 64.6 1.3 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|407463933|ref|YP_006774815.1| - 9.9e-16 58.3 0.0 4.3e-15 56.2 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|407463933|ref|YP_006774815.1| - 0.0002 21.8 0.2 0.00061 20.2 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|407463933|ref|YP_006774815.1| - 0.0022 17.5 0.0 0.0031 17.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.6 gi|407463933|ref|YP_006774815.1| - 0.012 15.5 0.0 0.025 14.5 0.0 1.5 2 0 0 2 2 2 0 Glycosyl transferase family group 2 AhpC-TSA PF00578.21 gi|407463933|ref|YP_006774815.1| - 0.1 12.5 0.0 0.26 11.2 0.0 1.6 1 1 0 1 1 1 0 AhpC/TSA family Linker_histone PF00538.19 gi|407463933|ref|YP_006774815.1| - 0.12 12.7 0.9 2.1 8.8 0.0 3.0 2 1 0 2 2 2 0 linker histone H1 and H5 family Phage_holin_2_4 PF16082.5 gi|407463934|ref|YP_006774816.1| - 0.65 9.8 2.6 19 5.1 0.0 2.5 2 1 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Methyltransf_11 PF08241.12 gi|407463935|ref|YP_006774817.1| - 5.2e-09 36.6 0.2 2.7e-08 34.4 0.2 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407463935|ref|YP_006774817.1| - 3.6e-08 34.0 0.2 4.1e-07 30.6 0.2 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|407463935|ref|YP_006774817.1| - 8.4e-05 23.3 0.3 0.00018 22.2 0.3 1.6 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|407463935|ref|YP_006774817.1| - 0.00021 20.9 0.9 0.0099 15.5 0.9 2.1 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_23 PF13489.6 gi|407463935|ref|YP_006774817.1| - 0.00037 20.4 0.0 0.00064 19.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|407463935|ref|YP_006774817.1| - 0.0012 18.7 1.2 0.0038 17.0 1.2 1.8 1 1 0 1 1 1 1 Methyltransferase domain Glyco_hydro_25 PF01183.20 gi|407463935|ref|YP_006774817.1| - 0.17 12.1 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 25 Glycos_transf_1 PF00534.20 gi|407463936|ref|YP_006774818.1| - 9.8e-13 48.0 0.4 2.2e-12 46.9 0.4 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|407463936|ref|YP_006774818.1| - 2.4e-11 43.9 0.0 3.6e-11 43.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|407463936|ref|YP_006774818.1| - 3.6e-07 30.7 0.0 5.8e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 PS_pyruv_trans PF04230.13 gi|407463936|ref|YP_006774818.1| - 0.06 13.3 0.3 0.06 13.3 0.3 1.9 2 0 0 2 2 2 0 Polysaccharide pyruvyl transferase Exostosin PF03016.15 gi|407463936|ref|YP_006774818.1| - 0.086 12.0 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Exostosin family IF-2B PF01008.17 gi|407463937|ref|YP_006774819.1| - 2.8e-86 289.3 1.8 3.5e-86 288.9 1.8 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family Serine_rich PF08824.10 gi|407463937|ref|YP_006774819.1| - 0.023 14.7 0.1 0.04 13.9 0.1 1.5 1 1 0 1 1 1 0 Serine rich protein interaction domain PEP-utilizers PF00391.23 gi|407463937|ref|YP_006774819.1| - 0.076 12.7 0.0 4 7.2 0.0 2.8 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain FeS_assembly_P PF01883.19 gi|407463938|ref|YP_006774820.1| - 8.8e-18 64.2 0.1 1.6e-17 63.4 0.1 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein PqqD PF05402.12 gi|407463938|ref|YP_006774820.1| - 6.4e-10 39.2 0.1 1e-09 38.6 0.1 1.3 1 0 0 1 1 1 1 Coenzyme PQQ synthesis protein D (PqqD) HemN_C PF06969.16 gi|407463938|ref|YP_006774820.1| - 0.036 14.1 0.7 0.079 13.0 0.3 1.7 2 0 0 2 2 2 0 HemN C-terminal domain DUF4777 PF16007.5 gi|407463938|ref|YP_006774820.1| - 0.16 12.2 0.2 0.37 11.1 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) HU-CCDC81_bac_2 PF18175.1 gi|407463938|ref|YP_006774820.1| - 0.2 11.5 0.5 2.3 8.2 0.1 2.7 3 0 0 3 3 3 0 CCDC81-like prokaryotic HU domain 2 adh_short_C2 PF13561.6 gi|407463939|ref|YP_006774821.1| - 8.6e-19 68.0 0.0 9.7e-18 64.6 0.0 1.9 1 1 1 2 2 2 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|407463939|ref|YP_006774821.1| - 1e-17 64.3 0.0 6.8e-13 48.5 0.0 2.1 1 1 1 2 2 2 2 short chain dehydrogenase RmlD_sub_bind PF04321.17 gi|407463939|ref|YP_006774821.1| - 0.023 13.8 0.0 0.037 13.1 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain PIRT PF15099.6 gi|407463943|ref|YP_006774825.1| - 0.0011 18.5 0.5 0.024 14.2 0.1 2.2 2 0 0 2 2 2 1 Phosphoinositide-interacting protein family Motile_Sperm PF00635.26 gi|407463943|ref|YP_006774825.1| - 0.013 15.3 0.6 0.023 14.6 0.4 1.5 1 1 0 1 1 1 0 MSP (Major sperm protein) domain FlgD_ig PF13860.6 gi|407463943|ref|YP_006774825.1| - 0.07 13.0 0.1 0.16 11.9 0.1 1.6 1 1 0 1 1 1 0 FlgD Ig-like domain Invasin_D3 PF09134.10 gi|407463943|ref|YP_006774825.1| - 0.13 12.6 0.1 0.2 12.0 0.1 1.2 1 0 0 1 1 1 0 Invasin, domain 3 Aminotran_1_2 PF00155.21 gi|407463944|ref|YP_006774826.1| - 1.5e-61 208.6 0.0 1.8e-61 208.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|407463944|ref|YP_006774826.1| - 9.6e-08 31.7 0.0 1.6e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|407463944|ref|YP_006774826.1| - 1.9e-06 27.1 0.0 4.2e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|407463944|ref|YP_006774826.1| - 0.0013 17.3 0.0 0.0019 16.8 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|407463944|ref|YP_006774826.1| - 0.01 15.1 0.0 0.028 13.7 0.0 1.7 1 1 0 1 1 1 0 Beta-eliminating lyase Aminotran_MocR PF12897.7 gi|407463944|ref|YP_006774826.1| - 0.026 13.3 0.0 0.031 13.0 0.0 1.2 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase HRDC PF00570.23 gi|407463944|ref|YP_006774826.1| - 0.13 12.2 0.0 14 5.7 0.0 2.9 3 0 0 3 3 3 0 HRDC domain Putative_PNPOx PF01243.20 gi|407463945|ref|YP_006774827.1| - 2e-17 63.1 0.0 2.8e-17 62.7 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|407463945|ref|YP_006774827.1| - 1.6e-11 44.4 0.0 2e-11 44.1 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Gram_pos_anchor PF00746.21 gi|407463946|ref|YP_006774828.1| - 0.17 11.8 0.3 19 5.3 0.1 2.2 2 0 0 2 2 2 0 LPXTG cell wall anchor motif F420_oxidored PF03807.17 gi|407463947|ref|YP_006774829.1| - 3.2e-15 56.5 0.1 6.3e-15 55.5 0.1 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DapB_N PF01113.20 gi|407463947|ref|YP_006774829.1| - 0.023 14.8 0.1 0.048 13.8 0.1 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus NAD_binding_2 PF03446.15 gi|407463947|ref|YP_006774829.1| - 0.029 14.6 0.0 0.052 13.7 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|407463947|ref|YP_006774829.1| - 0.048 13.9 0.1 0.091 13.0 0.1 1.6 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain PDH PF02153.17 gi|407463947|ref|YP_006774829.1| - 0.12 11.4 0.0 0.2 10.7 0.0 1.3 1 0 0 1 1 1 0 Prephenate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|407463947|ref|YP_006774829.1| - 0.12 12.3 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus His_Phos_1 PF00300.22 gi|407463948|ref|YP_006774830.1| - 1.8e-50 171.3 0.0 2e-50 171.2 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Lipase_GDSL_3 PF14606.6 gi|407463948|ref|YP_006774830.1| - 0.071 13.2 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family COX2 PF00116.20 gi|407463950|ref|YP_006774832.1| - 2.9e-14 53.0 1.2 9.1e-11 41.7 0.0 2.1 1 1 1 2 2 2 2 Cytochrome C oxidase subunit II, periplasmic domain Cupredoxin_1 PF13473.6 gi|407463950|ref|YP_006774832.1| - 4.3e-06 26.8 0.0 5.2e-06 26.5 0.0 1.3 1 1 0 1 1 1 1 Cupredoxin-like domain COX1 PF00115.20 gi|407463951|ref|YP_006774833.1| - 1.5e-129 432.7 62.0 1.8e-129 432.4 62.0 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Copper-bind PF00127.20 gi|407463952|ref|YP_006774834.1| - 1.1e-15 57.8 0.4 6.3e-08 33.0 0.1 2.4 2 0 0 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Cu-oxidase_3 PF07732.15 gi|407463952|ref|YP_006774834.1| - 3.6e-13 49.6 1.4 1.6e-05 24.9 0.0 2.7 2 1 0 2 2 2 2 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|407463952|ref|YP_006774834.1| - 1.3e-08 34.6 0.0 0.0027 17.4 0.0 3.3 3 1 0 3 3 3 2 Multicopper oxidase Cupredoxin_1 PF13473.6 gi|407463952|ref|YP_006774834.1| - 2e-07 31.1 0.0 0.0026 17.9 0.0 2.7 2 0 0 2 2 2 2 Cupredoxin-like domain SoxE PF06525.11 gi|407463952|ref|YP_006774834.1| - 3.2e-06 26.7 3.8 0.025 14.1 0.2 3.3 2 2 0 2 2 2 2 Sulfocyanin (SoxE) domain Cu_bind_like PF02298.17 gi|407463952|ref|YP_006774834.1| - 2e-05 24.5 0.2 0.3 11.1 0.1 2.9 2 1 0 2 2 2 2 Plastocyanin-like domain CHU_C PF13585.6 gi|407463952|ref|YP_006774834.1| - 0.021 14.9 0.3 4.9 7.3 0.0 2.4 2 0 0 2 2 2 0 C-terminal domain of CHU protein family TolB_N PF04052.13 gi|407463952|ref|YP_006774834.1| - 0.18 12.0 0.0 3.8 7.7 0.0 2.1 2 0 0 2 2 2 0 TolB amino-terminal domain PPC PF04151.15 gi|407463952|ref|YP_006774834.1| - 5.7 8.1 10.8 0.98 10.6 1.4 3.2 2 2 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain COX15-CtaA PF02628.15 gi|407463953|ref|YP_006774835.1| - 1.4e-16 60.5 14.0 1.5e-12 47.3 6.3 2.0 1 1 1 2 2 2 2 Cytochrome oxidase assembly protein Polyketide_cyc2 PF10604.9 gi|407463955|ref|YP_006774837.1| - 2.4e-08 34.4 0.0 3e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|407463955|ref|YP_006774837.1| - 4.1e-07 30.3 0.0 6e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.11 gi|407463955|ref|YP_006774837.1| - 1.1e-06 28.9 0.0 1.7e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Response_reg PF00072.24 gi|407463956|ref|YP_006774838.1| - 1.4e-23 83.1 0.7 1.6e-23 83.0 0.7 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CPDase PF07823.11 gi|407463956|ref|YP_006774838.1| - 0.0008 19.2 0.0 0.00085 19.1 0.0 1.1 1 0 0 1 1 1 1 Cyclic phosphodiesterase-like protein DUF373 PF04123.13 gi|407463956|ref|YP_006774838.1| - 0.013 15.0 0.0 0.019 14.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) FleQ PF06490.11 gi|407463956|ref|YP_006774838.1| - 0.043 14.2 0.0 0.053 13.9 0.0 1.1 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ DUF483 PF04467.12 gi|407463956|ref|YP_006774838.1| - 0.069 13.1 0.1 0.085 12.9 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF483) DUF2482 PF10655.9 gi|407463956|ref|YP_006774838.1| - 0.11 13.0 2.9 0.91 10.1 0.3 2.1 2 0 0 2 2 2 0 Hypothetical protein of unknown function (DUF2482) HATPase_c PF02518.26 gi|407463957|ref|YP_006774839.1| - 2.5e-21 76.2 0.1 4.3e-21 75.5 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|407463957|ref|YP_006774839.1| - 7e-10 38.8 0.7 1.2e-09 38.0 0.0 1.7 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 gi|407463957|ref|YP_006774839.1| - 1.2e-07 31.6 0.1 2.4e-07 30.6 0.1 1.5 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.6 gi|407463957|ref|YP_006774839.1| - 0.008 16.0 0.0 0.019 14.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|407463957|ref|YP_006774839.1| - 0.072 13.1 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Ph1570 PF09638.10 gi|407463957|ref|YP_006774839.1| - 0.076 12.9 0.2 4 7.3 0.2 2.4 2 0 0 2 2 2 0 Ph1570 protein HPTransfase PF10090.9 gi|407463957|ref|YP_006774839.1| - 0.16 11.8 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 Histidine phosphotransferase C-terminal domain SPC25 PF06703.11 gi|407463957|ref|YP_006774839.1| - 2.2 8.1 9.8 0.074 12.8 1.1 2.6 2 0 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Methyltransf_25 PF13649.6 gi|407463958|ref|YP_006774840.1| - 1.1e-16 61.3 0.0 2.4e-16 60.2 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|407463958|ref|YP_006774840.1| - 1.1e-14 54.8 0.0 2e-14 54.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|407463958|ref|YP_006774840.1| - 6e-11 42.4 0.2 8.2e-11 41.9 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|407463958|ref|YP_006774840.1| - 2.6e-08 34.5 0.1 5.4e-08 33.5 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|407463958|ref|YP_006774840.1| - 4.5e-08 33.1 0.0 5.9e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|407463958|ref|YP_006774840.1| - 5.9e-08 32.3 0.1 7.7e-08 32.0 0.1 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|407463958|ref|YP_006774840.1| - 0.0076 15.9 0.0 0.011 15.4 0.0 1.3 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|407463958|ref|YP_006774840.1| - 0.023 14.1 0.0 0.036 13.5 0.0 1.4 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) NodS PF05401.11 gi|407463958|ref|YP_006774840.1| - 0.096 12.3 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Aminotran_4 PF01063.19 gi|407463959|ref|YP_006774841.1| - 2.2e-48 165.1 0.0 2.7e-48 164.8 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV BRCT PF00533.26 gi|407463959|ref|YP_006774841.1| - 0.069 13.5 0.0 0.28 11.6 0.0 2.0 1 1 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain AA_kinase PF00696.28 gi|407463961|ref|YP_006774843.1| - 1.1e-25 90.7 0.9 1.8e-25 89.9 0.9 1.4 1 0 0 1 1 1 1 Amino acid kinase family YajC PF02699.15 gi|407463961|ref|YP_006774843.1| - 0.013 15.4 0.1 0.042 13.7 0.1 1.9 1 0 0 1 1 1 0 Preprotein translocase subunit RRF PF01765.19 gi|407463961|ref|YP_006774843.1| - 0.33 10.9 5.9 1.1 9.2 2.3 2.3 2 0 0 2 2 2 0 Ribosome recycling factor Glyco_tran_28_C PF04101.16 gi|407463962|ref|YP_006774844.1| - 3.9e-14 53.0 0.1 7.4e-14 52.1 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 gi|407463962|ref|YP_006774844.1| - 8.8e-06 25.2 0.0 0.015 14.6 0.0 2.1 2 0 0 2 2 2 2 Glycosyl transferase family 1 Glyco_trans_1_4 PF13692.6 gi|407463962|ref|YP_006774844.1| - 0.00094 19.6 0.0 0.0018 18.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 LepB_N PF18640.1 gi|407463962|ref|YP_006774844.1| - 0.01 15.5 0.1 0.019 14.6 0.1 1.4 1 0 0 1 1 1 0 LepB N-terminal domain CCDC117 PF15810.5 gi|407463962|ref|YP_006774844.1| - 0.046 14.0 0.2 0.087 13.1 0.2 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 117 Ubie_methyltran PF01209.18 gi|407463963|ref|YP_006774845.1| - 1.5e-20 73.6 0.7 1.8e-20 73.3 0.7 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|407463963|ref|YP_006774845.1| - 1.5e-16 60.5 0.0 1.9e-16 60.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407463963|ref|YP_006774845.1| - 1.3e-15 57.9 0.0 2.2e-15 57.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|407463963|ref|YP_006774845.1| - 2e-13 50.9 0.0 3.4e-13 50.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|407463963|ref|YP_006774845.1| - 4.6e-12 46.1 0.0 7e-12 45.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|407463963|ref|YP_006774845.1| - 1.3e-11 44.9 0.0 2.2e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|407463963|ref|YP_006774845.1| - 1.3e-08 34.6 0.1 3.1e-08 33.3 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|407463963|ref|YP_006774845.1| - 9.6e-07 28.6 0.0 1.3e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) RrnaAD PF00398.20 gi|407463963|ref|YP_006774845.1| - 1.6e-06 27.4 0.1 2.2e-06 26.9 0.1 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.13 gi|407463963|ref|YP_006774845.1| - 4.4e-06 26.3 0.0 6.1e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_2 PF00891.18 gi|407463963|ref|YP_006774845.1| - 2.7e-05 23.6 0.1 0.0002 20.7 0.1 2.1 1 1 1 2 2 2 1 O-methyltransferase domain Methyltransf_5 PF01795.19 gi|407463963|ref|YP_006774845.1| - 6.3e-05 22.6 0.1 0.00092 18.8 0.0 2.0 2 0 0 2 2 2 1 MraW methylase family FtsJ PF01728.19 gi|407463963|ref|YP_006774845.1| - 0.00013 22.1 0.0 0.00044 20.4 0.0 1.8 1 1 0 1 1 1 1 FtsJ-like methyltransferase CMAS PF02353.20 gi|407463963|ref|YP_006774845.1| - 0.00016 21.1 0.1 0.00034 20.0 0.1 1.6 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|407463963|ref|YP_006774845.1| - 0.00018 21.0 0.0 0.00041 19.8 0.0 1.6 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_32 PF13679.6 gi|407463963|ref|YP_006774845.1| - 0.00065 19.7 0.0 0.00097 19.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|407463963|ref|YP_006774845.1| - 0.002 17.9 0.0 0.0052 16.6 0.0 1.5 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.7 gi|407463963|ref|YP_006774845.1| - 0.0026 17.7 0.0 0.0039 17.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain ADH_zinc_N PF00107.26 gi|407463963|ref|YP_006774845.1| - 0.0093 16.0 0.0 0.026 14.5 0.0 1.9 1 1 0 1 1 1 1 Zinc-binding dehydrogenase GidB PF02527.15 gi|407463963|ref|YP_006774845.1| - 0.023 14.0 0.0 0.038 13.3 0.0 1.4 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G DOT1 PF08123.13 gi|407463963|ref|YP_006774845.1| - 0.024 14.2 0.1 0.072 12.6 0.0 1.9 2 0 0 2 2 2 0 Histone methylation protein DOT1 Methyltr_RsmB-F PF01189.17 gi|407463963|ref|YP_006774845.1| - 0.05 13.2 0.1 0.081 12.6 0.1 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F DUF98 PF01947.16 gi|407463964|ref|YP_006774846.1| - 0.043 13.8 0.1 0.095 12.7 0.1 1.7 1 1 0 1 1 1 0 p-hydroxybenzoic acid synthase SoxZ PF08770.11 gi|407463964|ref|YP_006774846.1| - 0.052 13.3 0.0 0.083 12.7 0.0 1.4 1 0 0 1 1 1 0 Sulphur oxidation protein SoxZ MscL PF01741.18 gi|407463965|ref|YP_006774847.1| - 0.021 15.1 3.2 0.28 11.5 0.7 2.3 2 0 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL DUF3487 PF11990.8 gi|407463965|ref|YP_006774847.1| - 0.27 11.1 8.1 0.49 10.3 0.0 3.0 2 2 2 4 4 4 0 Protein of unknown function (DUF3487) PrgI PF12666.7 gi|407463965|ref|YP_006774847.1| - 1.9 9.2 8.8 5.8 7.7 3.9 3.1 2 1 0 2 2 2 0 PrgI family protein NdhM PF10664.9 gi|407463966|ref|YP_006774848.1| - 0.074 13.3 0.0 0.081 13.2 0.0 1.1 1 0 0 1 1 1 0 Cyanobacterial and plastid NDH-1 subunit M AMP-binding_C_2 PF14535.6 gi|407463966|ref|YP_006774848.1| - 0.12 12.7 0.1 0.13 12.6 0.1 1.2 1 1 0 1 1 1 0 AMP-binding enzyme C-terminal domain bact-PGI_C PF10432.9 gi|407463970|ref|YP_006774852.1| - 9.3e-35 119.9 0.0 1.4e-34 119.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial phospho-glucose isomerase C-terminal SIS domain SIS PF01380.22 gi|407463970|ref|YP_006774852.1| - 1.6e-05 24.8 0.4 4.4e-05 23.3 0.1 1.8 2 0 0 2 2 2 1 SIS domain Skp1_POZ PF03931.15 gi|407463970|ref|YP_006774852.1| - 0.099 12.8 0.1 0.3 11.3 0.1 1.8 1 0 0 1 1 1 0 Skp1 family, tetramerisation domain Response_reg PF00072.24 gi|407463971|ref|YP_006774853.1| - 3.6e-11 43.2 0.0 3.9e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain DUF4486 PF14858.6 gi|407463972|ref|YP_006774854.1| - 0.083 11.4 0.5 0.08 11.4 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4486) T3SS_ATPase_C PF18269.1 gi|407463973|ref|YP_006774855.1| - 0.086 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 T3SS EscN ATPase C-terminal domain Glycos_transf_1 PF00534.20 gi|407463974|ref|YP_006774856.1| - 8.3e-40 136.1 0.2 2.2e-39 134.8 0.2 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|407463974|ref|YP_006774856.1| - 7.1e-27 94.5 0.0 5.9e-26 91.5 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|407463974|ref|YP_006774856.1| - 1.8e-23 83.4 0.0 3e-23 82.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|407463974|ref|YP_006774856.1| - 4.1e-12 46.8 0.0 5.9e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|407463974|ref|YP_006774856.1| - 1e-10 41.8 0.0 1.8e-10 41.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|407463974|ref|YP_006774856.1| - 3.3e-06 27.4 0.0 6.9e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Guanylate_cyc PF00211.20 gi|407463975|ref|YP_006774857.1| - 4.3e-12 46.0 0.1 5.7e-12 45.6 0.1 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Guanylate_cyc PF00211.20 gi|407463976|ref|YP_006774858.1| - 2.5e-05 24.0 0.0 4.2e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Tyrosinase PF00264.20 gi|407463977|ref|YP_006774859.1| - 5.4e-44 151.1 0.9 1e-43 150.2 0.9 1.5 1 0 0 1 1 1 1 Common central domain of tyrosinase DUF4423 PF14394.6 gi|407463978|ref|YP_006774860.1| - 6.5e-06 26.0 0.2 1.3e-05 25.0 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_45 PF14947.6 gi|407463978|ref|YP_006774860.1| - 0.00031 20.7 0.7 0.00059 19.8 0.2 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DUF1724 PF08350.10 gi|407463978|ref|YP_006774860.1| - 0.011 15.9 0.1 0.021 14.9 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|407463978|ref|YP_006774860.1| - 0.088 12.7 1.2 0.14 12.1 0.4 1.8 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|407463978|ref|YP_006774860.1| - 0.094 12.8 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Reprolysin_3 PF13582.6 gi|407463980|ref|YP_006774862.1| - 6.5e-05 23.4 0.0 0.00013 22.5 0.0 1.5 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.6 gi|407463980|ref|YP_006774862.1| - 0.0014 18.8 0.0 0.002 18.3 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 Peptidase_M66 PF10462.9 gi|407463980|ref|YP_006774862.1| - 0.0015 17.6 1.6 0.0034 16.4 1.5 1.6 2 0 0 2 2 2 1 Peptidase M66 Reprolysin PF01421.19 gi|407463980|ref|YP_006774862.1| - 0.017 15.0 0.0 0.026 14.4 0.0 1.3 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease Reprolysin_4 PF13583.6 gi|407463980|ref|YP_006774862.1| - 0.02 14.5 0.0 0.044 13.4 0.0 1.5 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M11 PF05548.11 gi|407463980|ref|YP_006774862.1| - 0.021 14.0 0.0 0.03 13.5 0.0 1.2 1 0 0 1 1 1 0 Gametolysin peptidase M11 Astacin PF01400.24 gi|407463980|ref|YP_006774862.1| - 0.03 13.9 0.0 0.059 13.0 0.0 1.4 1 0 0 1 1 1 0 Astacin (Peptidase family M12A) Metallopep PF12044.8 gi|407463980|ref|YP_006774862.1| - 1.8 7.1 3.2 2.9 6.4 3.2 1.2 1 0 0 1 1 1 0 Putative peptidase family ApoLp-III PF07464.11 gi|407463982|ref|YP_006774864.1| - 0.018 15.1 6.6 0.021 14.9 5.7 1.6 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) HEPN_Toprim_N PF18871.1 gi|407463982|ref|YP_006774864.1| - 0.037 14.0 1.8 0.059 13.3 1.3 1.5 1 1 0 1 1 1 0 HEPN/Toprim N-terminal domain 1 CCDC106 PF15794.5 gi|407463982|ref|YP_006774864.1| - 0.074 12.8 0.2 0.074 12.8 0.2 2.4 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 106 DUF4211 PF13926.6 gi|407463982|ref|YP_006774864.1| - 0.37 10.9 4.5 0.93 9.5 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4211) TPR_11 PF13414.6 gi|407463982|ref|YP_006774864.1| - 0.43 10.3 3.1 38 4.1 0.1 3.2 2 1 1 3 3 3 0 TPR repeat RPAP3_C PF13877.6 gi|407463982|ref|YP_006774864.1| - 1.1 9.8 5.2 57 4.3 5.2 3.0 1 1 0 1 1 1 0 Potential Monad-binding region of RPAP3 DUF1706 PF08020.11 gi|407463983|ref|YP_006774865.1| - 0.011 15.6 0.4 0.012 15.6 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1706) GIT1_C PF12205.8 gi|407463983|ref|YP_006774865.1| - 0.06 13.5 0.0 0.062 13.4 0.0 1.1 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term UbiA PF01040.18 gi|407463984|ref|YP_006774866.1| - 4.8e-38 130.9 22.7 6.1e-38 130.5 22.7 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family AsnC_trans_reg PF01037.21 gi|407463985|ref|YP_006774867.1| - 8.8e-13 48.0 0.1 1.1e-12 47.8 0.1 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain Semialdhyde_dhC PF02774.18 gi|407463986|ref|YP_006774868.1| - 1.5e-31 109.9 0.0 2.6e-31 109.1 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|407463986|ref|YP_006774868.1| - 4.3e-30 104.6 0.1 8.2e-30 103.7 0.1 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|407463986|ref|YP_006774868.1| - 0.023 14.8 0.0 0.047 13.8 0.0 1.7 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 gi|407463986|ref|YP_006774868.1| - 0.053 14.4 0.0 0.087 13.7 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Gp_dh_C PF02800.20 gi|407463986|ref|YP_006774868.1| - 0.073 12.7 0.3 4.2 6.9 0.0 2.7 3 0 0 3 3 3 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Epimerase PF01370.21 gi|407463986|ref|YP_006774868.1| - 0.17 11.3 0.0 0.33 10.4 0.0 1.6 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Aminotran_1_2 PF00155.21 gi|407463988|ref|YP_006774870.1| - 3e-49 168.1 0.1 3.3e-49 168.0 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II CSTF2_hinge PF14327.6 gi|407463988|ref|YP_006774870.1| - 0.11 13.0 2.2 3.6 8.1 0.3 2.6 2 0 0 2 2 2 0 Hinge domain of cleavage stimulation factor subunit 2 CbiA PF01656.23 gi|407463989|ref|YP_006774871.1| - 3.9e-19 69.0 0.0 7.8e-19 68.0 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|407463989|ref|YP_006774871.1| - 1.3e-18 67.5 0.2 2.1e-17 63.6 0.2 2.1 1 1 0 1 1 1 1 AAA domain MobB PF03205.14 gi|407463989|ref|YP_006774871.1| - 0.00011 22.1 0.0 0.0027 17.6 0.0 2.3 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.22 gi|407463989|ref|YP_006774871.1| - 0.0014 18.3 0.7 0.42 10.2 0.1 2.3 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain CBP_BcsQ PF06564.12 gi|407463989|ref|YP_006774871.1| - 0.0044 16.5 0.1 0.024 14.1 0.1 2.0 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ AAA_23 PF13476.6 gi|407463989|ref|YP_006774871.1| - 0.0064 17.0 0.1 0.014 15.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|407463989|ref|YP_006774871.1| - 0.0078 15.9 0.2 0.041 13.6 0.2 1.9 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|407463989|ref|YP_006774871.1| - 0.016 15.1 0.1 0.16 11.9 0.0 2.3 2 0 0 2 2 2 0 NTPase cobW PF02492.19 gi|407463989|ref|YP_006774871.1| - 0.017 14.7 0.0 1.3 8.6 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain VirC1 PF07015.11 gi|407463989|ref|YP_006774871.1| - 0.045 13.0 0.2 0.098 11.9 0.0 1.7 2 0 0 2 2 2 0 VirC1 protein AAA_16 PF13191.6 gi|407463989|ref|YP_006774871.1| - 0.049 14.0 0.0 0.082 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|407463989|ref|YP_006774871.1| - 0.061 13.8 0.0 0.15 12.6 0.0 1.8 2 0 0 2 2 2 0 ABC transporter CobD_Cbib PF03186.13 gi|407463990|ref|YP_006774872.1| - 1.9e-85 286.5 0.2 2.3e-85 286.1 0.2 1.1 1 0 0 1 1 1 1 CobD/Cbib protein DUF1700 PF08006.11 gi|407463990|ref|YP_006774872.1| - 0.54 9.8 8.1 3.5 7.1 4.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) SP_C-Propep PF08999.10 gi|407463990|ref|YP_006774872.1| - 0.87 9.4 6.4 0.54 10.1 3.8 2.0 1 1 1 2 2 2 0 Surfactant protein C, N terminal propeptide Phage_holin_3_6 PF07332.11 gi|407463990|ref|YP_006774872.1| - 8.2 6.5 9.3 0.2 11.7 0.4 2.5 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III CobS PF02654.15 gi|407463991|ref|YP_006774873.1| - 8.3e-41 140.4 18.9 9.5e-41 140.2 18.9 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase NTP_transf_3 PF12804.7 gi|407463992|ref|YP_006774874.1| - 3e-14 53.7 0.0 3.5e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|407463992|ref|YP_006774874.1| - 7.5e-07 29.1 0.0 9.7e-07 28.7 0.0 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 gi|407463992|ref|YP_006774874.1| - 0.002 18.1 0.1 0.0033 17.4 0.1 1.4 1 1 0 1 1 1 1 Cytidylyltransferase NTP_transferase PF00483.23 gi|407463992|ref|YP_006774874.1| - 0.0029 17.2 0.1 0.015 14.9 0.0 1.9 1 1 0 2 2 2 1 Nucleotidyl transferase Mic1 PF07035.12 gi|407463992|ref|YP_006774874.1| - 0.0091 15.7 0.2 0.024 14.4 0.1 1.7 2 0 0 2 2 2 1 Colon cancer-associated protein Mic1-like MinE PF03776.14 gi|407463992|ref|YP_006774874.1| - 0.12 12.4 0.6 6.7 6.8 0.1 2.3 2 0 0 2 2 2 0 Septum formation topological specificity factor MinE DUF4851 PF16143.5 gi|407463992|ref|YP_006774874.1| - 0.15 11.5 0.0 0.23 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4851) Ribosomal_S27e PF01667.17 gi|407463993|ref|YP_006774875.1| - 2.8e-18 65.4 0.9 3.3e-18 65.1 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 zf-ribbon_3 PF13248.6 gi|407463993|ref|YP_006774875.1| - 0.0011 18.3 1.8 0.79 9.2 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain Zn_Tnp_IS91 PF14319.6 gi|407463993|ref|YP_006774875.1| - 0.0013 18.7 0.7 0.0015 18.5 0.7 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain ZZ PF00569.17 gi|407463993|ref|YP_006774875.1| - 0.0071 16.1 2.0 1.4 8.8 0.2 2.2 2 0 0 2 2 2 2 Zinc finger, ZZ type TF_Zn_Ribbon PF08271.12 gi|407463993|ref|YP_006774875.1| - 0.0077 15.7 0.3 0.0098 15.4 0.3 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zinc_ribbon_6 PF14599.6 gi|407463993|ref|YP_006774875.1| - 0.0089 16.0 2.6 0.064 13.3 2.8 1.9 1 1 0 1 1 1 1 Zinc-ribbon zf-dskA_traR PF01258.17 gi|407463993|ref|YP_006774875.1| - 0.011 15.7 0.6 2.5 8.1 0.0 2.2 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger zf-C2H2_7 PF15269.6 gi|407463993|ref|YP_006774875.1| - 0.017 15.2 0.5 0.021 14.9 0.5 1.1 1 0 0 1 1 1 0 Zinc-finger YhfH PF14149.6 gi|407463993|ref|YP_006774875.1| - 0.02 14.9 0.9 2.7 8.1 0.1 2.2 2 0 0 2 2 2 0 YhfH-like protein zf-ACC PF17848.1 gi|407463993|ref|YP_006774875.1| - 0.03 14.4 1.8 4.2 7.5 0.2 2.3 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain DZR PF12773.7 gi|407463993|ref|YP_006774875.1| - 0.032 14.2 1.8 0.057 13.4 1.8 1.5 1 1 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|407463993|ref|YP_006774875.1| - 0.04 14.0 0.9 0.073 13.2 0.9 1.5 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|407463993|ref|YP_006774875.1| - 0.058 13.1 2.8 2.6 7.9 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-BED PF02892.15 gi|407463993|ref|YP_006774875.1| - 0.06 13.4 4.6 1 9.5 0.6 2.2 1 1 1 2 2 2 0 BED zinc finger PADR1 PF08063.12 gi|407463993|ref|YP_006774875.1| - 0.1 12.4 1.8 0.17 11.7 1.8 1.4 1 1 0 1 1 1 0 PADR1 (NUC008) domain zf-HYPF PF07503.12 gi|407463993|ref|YP_006774875.1| - 0.19 11.5 2.9 9.3 6.1 0.2 2.2 2 0 0 2 2 2 0 HypF finger zf-C2H2_3 PF13878.6 gi|407463993|ref|YP_006774875.1| - 4.6 7.1 6.3 4.3 7.2 1.2 2.2 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO Ribosomal_L44 PF00935.19 gi|407463994|ref|YP_006774876.1| - 2e-24 85.9 10.4 2e-24 85.9 10.4 1.6 1 1 1 2 2 2 1 Ribosomal protein L44 Ribosomal_L33 PF00471.20 gi|407463994|ref|YP_006774876.1| - 0.028 14.9 7.1 0.22 12.0 1.7 2.6 2 0 0 2 2 2 0 Ribosomal protein L33 Adenine_deam_C PF13382.6 gi|407463995|ref|YP_006774877.1| - 2.1e-44 150.8 0.0 3.6e-44 150.1 0.0 1.4 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 gi|407463995|ref|YP_006774877.1| - 2.1e-18 66.8 0.0 2.3e-17 63.3 0.0 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|407463995|ref|YP_006774877.1| - 1.3e-09 38.1 0.0 0.00024 20.7 0.1 2.2 2 0 0 2 2 2 2 Amidohydrolase family Cpn60_TCP1 PF00118.24 gi|407463996|ref|YP_006774878.1| - 1.3e-179 598.0 17.5 1.5e-179 597.8 17.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Dak2 PF02734.17 gi|407463996|ref|YP_006774878.1| - 0.0087 16.0 0.3 2.5 7.9 0.1 2.6 2 0 0 2 2 2 2 DAK2 domain ROK PF00480.20 gi|407463997|ref|YP_006774879.1| - 5.8e-69 232.8 0.1 6.6e-69 232.6 0.1 1.0 1 0 0 1 1 1 1 ROK family BcrAD_BadFG PF01869.20 gi|407463997|ref|YP_006774879.1| - 2.8e-05 23.7 0.0 8.1e-05 22.2 0.0 1.7 1 1 1 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family Hydant_A_N PF05378.13 gi|407463997|ref|YP_006774879.1| - 0.00052 19.8 0.0 0.00076 19.2 0.0 1.3 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region FGGY_N PF00370.21 gi|407463997|ref|YP_006774879.1| - 0.045 13.3 0.0 0.091 12.3 0.0 1.5 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain Glucokinase PF02685.16 gi|407463997|ref|YP_006774879.1| - 0.16 11.0 0.6 0.7 8.8 0.6 2.0 1 1 0 1 1 1 0 Glucokinase DUF2024 PF09630.10 gi|407463998|ref|YP_006774880.1| - 2.2e-34 117.1 2.0 2.5e-34 117.0 2.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2024) GATase PF00117.28 gi|407464000|ref|YP_006774882.1| - 1e-41 142.8 0.0 1.5e-41 142.3 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GMP_synt_C PF00958.22 gi|407464000|ref|YP_006774882.1| - 1.7e-34 117.7 0.1 4e-34 116.6 0.1 1.7 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|407464000|ref|YP_006774882.1| - 3e-10 39.6 0.5 5.2e-05 22.5 0.0 2.2 2 0 0 2 2 2 2 NAD synthase Peptidase_C26 PF07722.13 gi|407464000|ref|YP_006774882.1| - 7.9e-08 32.3 0.1 3e-07 30.4 0.1 2.0 1 1 0 1 1 1 1 Peptidase C26 ThiI PF02568.14 gi|407464000|ref|YP_006774882.1| - 0.00027 20.6 0.0 0.013 15.1 0.0 2.3 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|407464000|ref|YP_006774882.1| - 0.00074 18.4 0.0 0.015 14.1 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase QueC PF06508.13 gi|407464000|ref|YP_006774882.1| - 0.0025 17.4 0.0 0.14 11.6 0.0 2.3 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|407464000|ref|YP_006774882.1| - 0.062 13.1 0.1 0.13 12.0 0.0 1.6 2 0 0 2 2 2 0 PP-loop family PAPS_reduct PF01507.19 gi|407464000|ref|YP_006774882.1| - 0.075 13.1 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.21 gi|407464000|ref|YP_006774882.1| - 0.076 12.7 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase Proteasome PF00227.26 gi|407464000|ref|YP_006774882.1| - 0.13 11.7 0.2 0.35 10.3 0.1 1.7 2 0 0 2 2 2 0 Proteasome subunit Imm6 PF14434.6 gi|407464001|ref|YP_006774883.1| - 0.031 14.2 2.2 0.41 10.6 0.2 2.2 2 0 0 2 2 2 0 Immunity protein Imm6 MAF_flag10 PF01973.18 gi|407464002|ref|YP_006774884.1| - 1.6e-36 125.6 0.8 2.3e-36 125.1 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF115 Pterin_bind PF00809.22 gi|407464003|ref|YP_006774885.1| - 1.2e-52 179.1 0.0 2e-52 178.3 0.0 1.4 1 1 0 1 1 1 1 Pterin binding enzyme IMPDH PF00478.25 gi|407464004|ref|YP_006774886.1| - 3.5e-146 486.6 9.0 4.1e-146 486.4 9.0 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|407464004|ref|YP_006774886.1| - 2.7e-23 82.1 1.8 2.3e-11 43.9 0.0 3.3 3 0 0 3 3 3 2 CBS domain NMO PF03060.15 gi|407464004|ref|YP_006774886.1| - 1.5e-09 37.8 6.7 6.3e-06 25.8 4.2 2.4 2 0 0 2 2 2 2 Nitronate monooxygenase His_biosynth PF00977.21 gi|407464004|ref|YP_006774886.1| - 1.1e-06 28.3 1.4 0.015 14.8 0.1 2.4 1 1 1 2 2 2 2 Histidine biosynthesis protein FMN_dh PF01070.18 gi|407464004|ref|YP_006774886.1| - 1.8e-06 27.3 8.1 3.9e-06 26.1 7.8 1.7 1 1 0 1 1 1 1 FMN-dependent dehydrogenase DHO_dh PF01180.21 gi|407464004|ref|YP_006774886.1| - 0.00034 19.9 6.3 0.00051 19.4 1.1 2.4 1 1 0 2 2 2 1 Dihydroorotate dehydrogenase NanE PF04131.14 gi|407464004|ref|YP_006774886.1| - 0.0028 16.9 2.3 0.012 14.8 2.3 2.1 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase PEP_mutase PF13714.6 gi|407464004|ref|YP_006774886.1| - 0.035 13.6 1.2 0.12 11.8 0.2 2.1 2 0 0 2 2 2 0 Phosphoenolpyruvate phosphomutase ThiG PF05690.14 gi|407464004|ref|YP_006774886.1| - 0.1 11.9 2.5 0.14 11.4 1.0 2.1 1 1 0 1 1 1 0 Thiazole biosynthesis protein ThiG PcrB PF01884.17 gi|407464004|ref|YP_006774886.1| - 0.13 11.7 6.1 5.3 6.4 0.1 3.8 3 1 1 4 4 4 0 PcrB family PRC PF05239.16 gi|407464004|ref|YP_006774886.1| - 0.51 10.5 2.7 1.9 8.7 0.5 2.9 2 1 1 3 3 3 0 PRC-barrel domain PDT PF00800.18 gi|407464006|ref|YP_006774888.1| - 1.6e-58 197.6 0.4 2e-58 197.3 0.4 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|407464006|ref|YP_006774888.1| - 4.9e-05 23.0 0.0 8.4e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 ACT domain SLAM PF06214.11 gi|407464006|ref|YP_006774888.1| - 0.055 13.5 0.2 0.13 12.3 0.2 1.6 1 1 0 1 1 1 0 Signaling lymphocytic activation molecule (SLAM) protein ECR1_N PF14382.6 gi|407464007|ref|YP_006774889.1| - 0.00083 19.1 0.0 0.0033 17.2 0.0 2.0 2 0 0 2 2 2 1 Exosome complex exonuclease RRP4 N-terminal region Zn_ribbon_SprT PF17283.2 gi|407464007|ref|YP_006774889.1| - 0.15 12.0 1.7 0.57 10.1 0.2 2.4 2 1 0 2 2 2 0 SprT-like zinc ribbon domain ADH_zinc_N PF00107.26 gi|407464008|ref|YP_006774890.1| - 3.4e-25 88.5 0.0 6.3e-25 87.7 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|407464008|ref|YP_006774890.1| - 2e-24 85.6 0.2 3e-24 85.0 0.2 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 gi|407464008|ref|YP_006774890.1| - 5.1e-16 59.9 0.0 8e-16 59.3 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase TPR_1 PF00515.28 gi|407464009|ref|YP_006774891.1| - 2.1e-24 84.3 1.4 3.9e-09 35.9 0.2 5.1 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407464009|ref|YP_006774891.1| - 9.9e-22 75.3 0.1 1.2e-06 28.2 0.1 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407464009|ref|YP_006774891.1| - 3.6e-15 54.8 1.2 2.2e-06 27.4 0.2 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407464009|ref|YP_006774891.1| - 6.3e-15 55.5 0.0 3.6e-06 27.4 0.0 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407464009|ref|YP_006774891.1| - 3.7e-13 49.6 0.1 0.0016 18.7 0.1 4.4 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407464009|ref|YP_006774891.1| - 1.4e-12 47.3 0.0 0.012 16.3 0.0 5.1 3 1 2 5 5 5 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|407464009|ref|YP_006774891.1| - 7.6e-11 42.5 0.0 1.2e-06 29.1 0.0 2.9 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|407464009|ref|YP_006774891.1| - 7.7e-11 41.2 0.2 0.0004 20.2 0.1 5.0 5 0 0 5 5 5 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|407464009|ref|YP_006774891.1| - 1.4e-10 41.1 0.3 0.00047 20.2 0.0 4.2 4 0 0 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat TPR_11 PF13414.6 gi|407464009|ref|YP_006774891.1| - 2.8e-10 39.7 0.7 0.0012 18.4 0.3 4.7 4 1 1 5 5 5 2 TPR repeat TPR_6 PF13174.6 gi|407464009|ref|YP_006774891.1| - 6.2e-10 39.1 0.0 1.6 9.6 0.0 5.1 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|407464009|ref|YP_006774891.1| - 6.3e-10 38.6 0.3 0.00083 19.1 0.1 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|407464009|ref|YP_006774891.1| - 2.8e-09 37.1 0.7 0.0015 18.7 0.1 2.2 2 0 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 gi|407464009|ref|YP_006774891.1| - 5.1e-07 29.6 10.4 0.0014 18.9 0.5 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|407464009|ref|YP_006774891.1| - 1.3e-05 25.2 0.0 0.00015 21.8 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|407464009|ref|YP_006774891.1| - 0.0012 18.3 0.2 0.1 12.0 0.1 2.1 1 1 0 2 2 2 1 Coatomer epsilon subunit PPR PF01535.20 gi|407464009|ref|YP_006774891.1| - 0.004 17.3 0.3 13 6.3 0.0 4.5 5 0 0 5 5 5 0 PPR repeat DUF4919 PF16266.5 gi|407464009|ref|YP_006774891.1| - 0.016 15.2 0.1 0.12 12.3 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4919) ATP13 PF12921.7 gi|407464009|ref|YP_006774891.1| - 0.031 14.1 0.2 0.78 9.6 0.1 2.5 1 1 1 2 2 2 0 Mitochondrial ATPase expression Alkyl_sulf_dimr PF14863.6 gi|407464009|ref|YP_006774891.1| - 0.038 14.4 0.0 0.12 12.9 0.0 1.8 1 1 0 1 1 1 0 Alkyl sulfatase dimerisation ChAPs PF09295.10 gi|407464009|ref|YP_006774891.1| - 0.087 11.8 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) TPR_5 PF12688.7 gi|407464009|ref|YP_006774891.1| - 0.17 12.1 0.0 7.7 6.8 0.0 2.4 2 1 0 2 2 2 0 Tetratrico peptide repeat MIT PF04212.18 gi|407464009|ref|YP_006774891.1| - 0.85 9.7 4.9 3.8 7.7 0.4 3.1 3 1 1 4 4 3 0 MIT (microtubule interacting and transport) domain Diphthamide_syn PF01866.17 gi|407464010|ref|YP_006774892.1| - 8.1e-61 206.1 0.0 9.4e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein DUF1743 PF08489.11 gi|407464011|ref|YP_006774893.1| - 6.9e-34 116.4 0.0 4.6e-33 113.7 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1743) C1_1 PF00130.22 gi|407464011|ref|YP_006774893.1| - 0.0059 16.5 2.2 0.01 15.7 2.2 1.4 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Elf1 PF05129.13 gi|407464011|ref|YP_006774893.1| - 0.84 9.7 5.2 2.8 8.0 5.2 1.9 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zinc_ribbon_2 PF13240.6 gi|407464011|ref|YP_006774893.1| - 2.6 7.9 6.0 6.2 6.7 6.0 1.6 1 0 0 1 1 1 0 zinc-ribbon domain GSDH PF07995.11 gi|407464012|ref|YP_006774894.1| - 1.8e-84 283.9 0.0 2.6e-84 283.4 0.0 1.2 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase Reg_prop PF07494.11 gi|407464012|ref|YP_006774894.1| - 0.00094 19.1 2.4 24 5.6 0.1 4.8 4 0 0 4 4 4 2 Two component regulator propeller NHL PF01436.21 gi|407464012|ref|YP_006774894.1| - 0.0037 17.2 0.2 10 6.3 0.0 3.8 4 0 0 4 4 4 2 NHL repeat SGL PF08450.12 gi|407464012|ref|YP_006774894.1| - 0.14 11.8 0.1 0.78 9.3 0.0 2.5 2 1 0 2 2 2 0 SMP-30/Gluconolactonase/LRE-like region HMG-CoA_red PF00368.18 gi|407464013|ref|YP_006774895.1| - 3.1e-103 345.6 7.1 3.7e-103 345.4 7.1 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase CAMSAP_CH PF11971.8 gi|407464013|ref|YP_006774895.1| - 0.1 12.4 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 CAMSAP CH domain HisG PF01634.18 gi|407464014|ref|YP_006774896.1| - 1.2e-44 152.1 0.0 1.7e-44 151.6 0.0 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|407464014|ref|YP_006774896.1| - 1.1e-14 54.4 0.0 3e-14 52.9 0.0 1.7 1 0 0 1 1 1 1 HisG, C-terminal domain Histidinol_dh PF00815.20 gi|407464015|ref|YP_006774897.1| - 3e-142 474.4 0.1 3.6e-142 474.2 0.1 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase Aminotran_1_2 PF00155.21 gi|407464016|ref|YP_006774898.1| - 2.7e-44 151.8 0.0 3.2e-44 151.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.13 gi|407464016|ref|YP_006774898.1| - 1.8e-07 30.4 0.0 2.6e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Allinase Aminotran_5 PF00266.19 gi|407464016|ref|YP_006774898.1| - 0.026 13.5 0.0 0.51 9.2 0.0 2.0 2 0 0 2 2 2 0 Aminotransferase class-V HAD_2 PF13419.6 gi|407464017|ref|YP_006774899.1| - 2.1e-09 37.7 3.3 1.1e-07 32.2 3.3 2.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|407464017|ref|YP_006774899.1| - 2e-08 34.8 0.0 3.6e-07 30.7 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|407464017|ref|YP_006774899.1| - 0.043 13.9 0.0 1.8 8.8 0.0 2.4 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase TM1506 PF08973.10 gi|407464017|ref|YP_006774899.1| - 0.057 13.1 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1893) GerE PF00196.19 gi|407464017|ref|YP_006774899.1| - 0.17 11.5 0.0 0.4 10.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family IGPD PF00475.18 gi|407464018|ref|YP_006774900.1| - 4e-47 160.2 0.6 5.4e-47 159.7 0.6 1.2 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase GATase PF00117.28 gi|407464019|ref|YP_006774901.1| - 2.7e-23 82.8 0.0 3e-23 82.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|407464019|ref|YP_006774901.1| - 0.006 16.4 1.0 1.6 8.4 0.6 2.9 2 1 0 2 2 2 2 Peptidase C26 GATase_3 PF07685.14 gi|407464019|ref|YP_006774901.1| - 0.067 12.8 0.0 0.11 12.0 0.0 1.3 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain His_biosynth PF00977.21 gi|407464020|ref|YP_006774902.1| - 2.6e-69 233.2 0.1 2.9e-69 233.0 0.1 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein IGPS PF00218.21 gi|407464020|ref|YP_006774902.1| - 0.00033 19.9 0.0 0.088 12.0 0.0 2.1 2 0 0 2 2 2 2 Indole-3-glycerol phosphate synthase PcrB PF01884.17 gi|407464020|ref|YP_006774902.1| - 0.0018 17.8 0.1 0.29 10.6 0.0 2.1 2 0 0 2 2 2 2 PcrB family TMP-TENI PF02581.17 gi|407464020|ref|YP_006774902.1| - 0.0083 15.5 0.4 1.4 8.2 0.0 2.8 2 1 1 3 3 3 1 Thiamine monophosphate synthase NMO PF03060.15 gi|407464020|ref|YP_006774902.1| - 0.014 14.9 0.0 3 7.2 0.0 2.2 2 0 0 2 2 2 0 Nitronate monooxygenase Syd PF07348.12 gi|407464020|ref|YP_006774902.1| - 0.1 12.2 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Syd protein (SUKH-2) His_biosynth PF00977.21 gi|407464021|ref|YP_006774903.1| - 4.9e-85 284.6 2.3 5.6e-85 284.4 2.3 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|407464021|ref|YP_006774903.1| - 3.6e-08 32.9 0.1 0.00011 21.4 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|407464021|ref|YP_006774903.1| - 1e-05 25.1 0.4 0.048 13.1 0.1 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase DHO_dh PF01180.21 gi|407464021|ref|YP_006774903.1| - 0.0007 18.9 0.1 0.0089 15.3 0.0 2.1 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase TMP-TENI PF02581.17 gi|407464021|ref|YP_006774903.1| - 0.0013 18.1 0.1 0.52 9.6 0.0 2.2 2 0 0 2 2 2 2 Thiamine monophosphate synthase ThiG PF05690.14 gi|407464021|ref|YP_006774903.1| - 0.0026 17.1 0.2 1.3 8.2 0.0 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 gi|407464021|ref|YP_006774903.1| - 0.0047 16.0 1.6 0.047 12.7 0.3 2.0 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Trp_syntA PF00290.20 gi|407464021|ref|YP_006774903.1| - 0.0081 15.0 0.1 0.013 14.4 0.1 1.2 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PcrB PF01884.17 gi|407464021|ref|YP_006774903.1| - 0.024 14.1 0.1 0.049 13.1 0.1 1.5 1 0 0 1 1 1 0 PcrB family G3P_antiterm PF04309.12 gi|407464021|ref|YP_006774903.1| - 0.037 13.4 0.2 0.6 9.5 0.1 2.2 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator PRA-CH PF01502.18 gi|407464022|ref|YP_006774904.1| - 2.4e-31 107.4 0.0 3e-31 107.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase PALP PF00291.25 gi|407464024|ref|YP_006774906.1| - 5.1e-68 229.6 0.2 5.9e-68 229.4 0.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACP_syn_III_C PF08541.10 gi|407464024|ref|YP_006774906.1| - 0.083 13.1 0.3 0.32 11.2 0.0 2.2 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1_2 PF03107.16 gi|407464024|ref|YP_006774906.1| - 0.11 12.9 1.4 0.18 12.1 1.4 1.3 1 0 0 1 1 1 0 C1 domain ThiF PF00899.21 gi|407464025|ref|YP_006774907.1| - 4.3e-65 219.5 0.2 1.1e-64 218.1 0.1 1.6 2 0 0 2 2 2 1 ThiF family ThiS PF02597.20 gi|407464025|ref|YP_006774907.1| - 2.6e-09 37.6 0.1 9.3e-09 35.8 0.0 2.0 2 1 0 2 2 2 1 ThiS family Sacchrp_dh_NADP PF03435.18 gi|407464025|ref|YP_006774907.1| - 0.00061 20.1 2.6 0.0024 18.1 2.6 2.0 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 gi|407464025|ref|YP_006774907.1| - 0.0025 17.9 0.1 0.0066 16.5 0.1 1.7 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 gi|407464025|ref|YP_006774907.1| - 0.064 13.7 0.3 0.17 12.3 0.3 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 gi|407464025|ref|YP_006774907.1| - 0.1 11.9 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|407464025|ref|YP_006774907.1| - 0.23 12.0 0.9 1.9 9.1 0.4 2.5 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Thioredoxin_3 PF13192.6 gi|407464028|ref|YP_006774910.1| - 1.1e-14 54.3 0.1 1.2e-14 54.1 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|407464028|ref|YP_006774910.1| - 1.7e-09 37.8 0.0 2.3e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 gi|407464028|ref|YP_006774910.1| - 0.0011 19.3 0.0 0.0014 19.0 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 gi|407464028|ref|YP_006774910.1| - 0.0017 18.7 0.1 0.0018 18.7 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) KaiB PF07689.12 gi|407464028|ref|YP_006774910.1| - 0.014 15.1 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 KaiB domain Thioredoxin_2 PF13098.6 gi|407464028|ref|YP_006774910.1| - 0.044 14.2 0.2 1.4 9.4 0.2 2.0 1 1 0 1 1 1 0 Thioredoxin-like domain YHS PF04945.13 gi|407464029|ref|YP_006774911.1| - 2.1e-16 59.7 0.2 2.2e-16 59.7 0.2 1.0 1 0 0 1 1 1 1 YHS domain Arc_trans_TRASH PF08394.10 gi|407464029|ref|YP_006774911.1| - 0.0011 19.2 0.5 0.0015 18.8 0.5 1.2 1 0 0 1 1 1 1 Archaeal TRASH domain DsbD PF02683.15 gi|407464030|ref|YP_006774912.1| - 1.4e-17 64.3 17.8 1.4e-17 64.3 17.8 2.0 1 1 1 2 2 2 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|407464030|ref|YP_006774912.1| - 2.9e-06 27.4 23.6 1.3e-05 25.2 8.7 2.4 1 1 1 2 2 2 2 Cytochrome C biogenesis protein transmembrane region DUF3185 PF11381.8 gi|407464030|ref|YP_006774912.1| - 0.15 12.1 11.4 0.81 9.8 1.3 4.2 4 1 0 4 4 4 0 Protein of unknown function (DUF3185) DUF2723 PF11028.8 gi|407464030|ref|YP_006774912.1| - 0.35 10.8 7.5 0.15 12.0 1.2 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2723) Ig_6 PF18452.1 gi|407464032|ref|YP_006774914.1| - 0.16 11.5 0.0 20 4.9 0.0 2.3 2 0 0 2 2 2 0 Immunoglobulin domain Radical_SAM PF04055.21 gi|407464033|ref|YP_006774915.1| - 8.9e-15 55.5 0.2 2.1e-14 54.2 0.1 1.7 2 0 0 2 2 2 1 Radical SAM superfamily IMPDH PF00478.25 gi|407464033|ref|YP_006774915.1| - 0.0032 16.5 0.1 0.0046 16.0 0.1 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain HTH_WhiA PF02650.14 gi|407464033|ref|YP_006774915.1| - 0.11 12.8 0.1 16 5.9 0.2 2.3 2 0 0 2 2 2 0 WhiA C-terminal HTH domain HTH_5 PF01022.20 gi|407464034|ref|YP_006774916.1| - 1.8e-09 37.3 0.1 3.4e-09 36.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|407464034|ref|YP_006774916.1| - 2.3e-05 24.4 0.0 3.4e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4423 PF14394.6 gi|407464034|ref|YP_006774916.1| - 0.00061 19.5 0.3 0.0037 17.0 0.2 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4423) HTH_24 PF13412.6 gi|407464034|ref|YP_006774916.1| - 0.00074 19.0 0.1 0.0014 18.1 0.1 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|407464034|ref|YP_006774916.1| - 0.0012 18.6 0.0 0.0018 18.1 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Phage_rep_O PF04492.13 gi|407464034|ref|YP_006774916.1| - 0.002 18.7 0.1 0.0025 18.4 0.1 1.2 1 0 0 1 1 1 1 Bacteriophage replication protein O B-block_TFIIIC PF04182.12 gi|407464034|ref|YP_006774916.1| - 0.0022 18.1 0.1 0.003 17.7 0.1 1.1 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_45 PF14947.6 gi|407464034|ref|YP_006774916.1| - 0.0024 17.8 0.7 0.0029 17.5 0.7 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_11 PF08279.12 gi|407464034|ref|YP_006774916.1| - 0.0026 17.7 0.0 0.0037 17.2 0.0 1.2 1 0 0 1 1 1 1 HTH domain HTH_12 PF08461.10 gi|407464034|ref|YP_006774916.1| - 0.0062 16.5 0.1 0.0097 15.8 0.1 1.3 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain MarR_2 PF12802.7 gi|407464034|ref|YP_006774916.1| - 0.021 14.7 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 MarR family FaeA PF04703.12 gi|407464034|ref|YP_006774916.1| - 0.029 14.7 0.0 0.048 14.0 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein MarR PF01047.22 gi|407464034|ref|YP_006774916.1| - 0.056 13.4 0.0 0.084 12.8 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_29 PF13551.6 gi|407464034|ref|YP_006774916.1| - 0.058 13.4 0.0 0.082 12.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix HTH_10 PF04967.12 gi|407464034|ref|YP_006774916.1| - 0.066 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain HTH_1 PF00126.27 gi|407464034|ref|YP_006774916.1| - 0.066 13.2 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family PheRS_DBD1 PF18552.1 gi|407464034|ref|YP_006774916.1| - 0.13 12.0 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 PheRS DNA binding domain 1 MFS_1 PF07690.16 gi|407464036|ref|YP_006774918.1| - 0.016 14.1 0.3 0.021 13.8 0.3 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily MARVEL PF01284.23 gi|407464036|ref|YP_006774918.1| - 0.68 9.9 6.2 4.2 7.4 4.6 2.0 2 0 0 2 2 2 0 Membrane-associating domain RVT_3 PF13456.6 gi|407464037|ref|YP_006774919.1| - 6e-15 55.1 0.0 7e-15 54.9 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 gi|407464037|ref|YP_006774919.1| - 1.7e-11 44.5 0.0 2e-11 44.2 0.0 1.1 1 0 0 1 1 1 1 RNase H Glyco_trans_1_2 PF13524.6 gi|407464037|ref|YP_006774919.1| - 0.054 13.9 0.2 0.1 13.0 0.2 1.4 1 1 0 1 1 1 0 Glycosyl transferases group 1 ATP-grasp_5 PF13549.6 gi|407464038|ref|YP_006774920.1| - 8.9e-80 267.3 0.6 1.8e-79 266.3 0.6 1.6 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|407464038|ref|YP_006774920.1| - 9.3e-53 177.7 0.7 9.3e-53 177.7 0.7 2.0 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|407464038|ref|YP_006774920.1| - 1.5e-22 80.2 0.5 1.2e-21 77.4 0.1 2.6 2 1 0 2 2 2 1 CoA binding domain CoA_binding PF02629.19 gi|407464038|ref|YP_006774920.1| - 6.4e-08 33.2 0.9 6.4e-08 33.2 0.9 2.4 2 0 0 2 2 2 1 CoA binding domain ATP-grasp_2 PF08442.10 gi|407464038|ref|YP_006774920.1| - 7.7e-06 25.6 1.8 2e-05 24.3 1.8 1.8 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|407464038|ref|YP_006774920.1| - 0.0016 18.0 0.2 0.0032 17.0 0.2 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|407464038|ref|YP_006774920.1| - 0.014 15.0 0.0 0.038 13.6 0.0 1.8 1 0 0 1 1 1 0 ATP-grasp domain Dak1_2 PF13684.6 gi|407464038|ref|YP_006774920.1| - 0.016 14.3 0.2 0.041 13.0 0.2 1.8 1 0 0 1 1 1 0 Dihydroxyacetone kinase family HpaB_N PF11794.8 gi|407464039|ref|YP_006774921.1| - 2e-94 316.3 0.0 2.9e-94 315.8 0.0 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 gi|407464039|ref|YP_006774921.1| - 1.2e-73 246.5 0.1 1.6e-73 246.1 0.1 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal Bt_P21 PF05560.11 gi|407464039|ref|YP_006774921.1| - 0.052 13.1 0.1 8.7 5.9 0.0 2.4 2 0 0 2 2 2 0 Bacillus thuringiensis P21 molecular chaperone protein Herpes_LP PF03363.13 gi|407464039|ref|YP_006774921.1| - 0.2 11.4 0.0 0.34 10.7 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus leader protein Peptidase_S24 PF00717.23 gi|407464041|ref|YP_006774923.1| - 1.2e-08 34.7 1.3 4.6e-08 32.9 0.2 2.2 2 0 0 2 2 2 1 Peptidase S24-like MscL PF01741.18 gi|407464041|ref|YP_006774923.1| - 0.0051 17.1 0.0 0.013 15.8 0.0 1.8 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL DZR PF12773.7 gi|407464042|ref|YP_006774924.1| - 7.7e-07 29.0 8.8 0.00057 19.9 3.0 2.3 2 0 0 2 2 2 2 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|407464042|ref|YP_006774924.1| - 9.9e-06 25.1 8.5 9.9e-06 25.1 8.5 2.8 3 0 0 3 3 3 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|407464042|ref|YP_006774924.1| - 0.00013 22.7 3.2 0.07 13.9 0.4 2.3 2 0 0 2 2 2 2 zinc-ribbon family PRC PF05239.16 gi|407464042|ref|YP_006774924.1| - 0.00024 21.1 0.5 0.00045 20.3 0.5 1.4 1 0 0 1 1 1 1 PRC-barrel domain zf-ribbon_3 PF13248.6 gi|407464042|ref|YP_006774924.1| - 0.0043 16.4 4.4 0.0043 16.4 4.4 2.9 3 0 0 3 3 3 1 zinc-ribbon domain zf-B_box PF00643.24 gi|407464042|ref|YP_006774924.1| - 0.092 12.9 8.7 1.1 9.5 0.6 3.1 3 0 0 3 3 3 0 B-box zinc finger TF_Zn_Ribbon PF08271.12 gi|407464042|ref|YP_006774924.1| - 0.1 12.1 0.1 0.1 12.1 0.1 3.1 2 1 0 2 2 2 0 TFIIB zinc-binding GFA PF04828.14 gi|407464042|ref|YP_006774924.1| - 0.12 12.7 3.8 35 4.8 0.0 3.7 3 1 1 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme A2L_zn_ribbon PF08792.10 gi|407464042|ref|YP_006774924.1| - 0.16 11.8 0.1 0.16 11.8 0.1 3.9 3 1 0 3 3 2 0 A2L zinc ribbon domain Tnp_zf-ribbon_2 PF13842.6 gi|407464042|ref|YP_006774924.1| - 0.44 11.4 9.2 4.4 8.2 0.1 3.3 3 0 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon zf-RRN7 PF11781.8 gi|407464042|ref|YP_006774924.1| - 0.96 9.2 12.7 0.77 9.5 3.1 2.8 3 0 0 3 3 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Gin PF10764.9 gi|407464042|ref|YP_006774924.1| - 4.2 7.4 10.6 1.1 9.2 0.1 3.3 3 0 0 3 3 3 0 Inhibitor of sigma-G Gin Thioredoxin PF00085.20 gi|407464043|ref|YP_006774925.1| - 5.3e-30 103.4 0.1 6.2e-30 103.2 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|407464043|ref|YP_006774925.1| - 2.1e-10 40.8 0.1 4.6e-06 26.9 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|407464043|ref|YP_006774925.1| - 2.4e-08 34.4 0.0 8.9e-08 32.6 0.0 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_9 PF14595.6 gi|407464043|ref|YP_006774925.1| - 5e-06 26.3 0.0 5.2e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.6 gi|407464043|ref|YP_006774925.1| - 8.5e-06 25.7 0.0 1.1e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_7 PF13899.6 gi|407464043|ref|YP_006774925.1| - 9.5e-06 25.7 0.0 1.5e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 gi|407464043|ref|YP_006774925.1| - 0.00065 19.4 0.1 0.0013 18.4 0.1 1.4 1 1 0 1 1 1 1 Redoxin TraF PF13728.6 gi|407464043|ref|YP_006774925.1| - 0.0011 18.9 0.0 0.0012 18.7 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein HyaE PF07449.11 gi|407464043|ref|YP_006774925.1| - 0.0018 18.2 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE OST3_OST6 PF04756.13 gi|407464043|ref|YP_006774925.1| - 0.01 15.2 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family DUF953 PF06110.11 gi|407464043|ref|YP_006774925.1| - 0.011 15.3 0.5 0.037 13.6 0.3 1.9 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Thioredoxin_4 PF13462.6 gi|407464043|ref|YP_006774925.1| - 0.025 14.8 0.2 1.7 8.8 0.0 2.0 1 1 1 2 2 2 0 Thioredoxin Thioredoxin_6 PF13848.6 gi|407464043|ref|YP_006774925.1| - 0.025 14.5 0.0 0.034 14.1 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Phosducin PF02114.16 gi|407464043|ref|YP_006774925.1| - 0.031 13.2 0.0 0.035 13.0 0.0 1.1 1 0 0 1 1 1 0 Phosducin Glutaredoxin PF00462.24 gi|407464043|ref|YP_006774925.1| - 0.041 14.1 0.1 0.076 13.3 0.1 1.5 1 1 0 1 1 1 0 Glutaredoxin DUF836 PF05768.14 gi|407464043|ref|YP_006774925.1| - 0.079 13.4 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DSBA PF01323.20 gi|407464043|ref|YP_006774925.1| - 0.1 12.4 0.1 0.83 9.4 0.0 1.9 1 1 1 2 2 2 0 DSBA-like thioredoxin domain zinc_ribbon_2 PF13240.6 gi|407464044|ref|YP_006774926.1| - 1.6e-07 30.8 3.4 2.4e-07 30.2 3.4 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|407464044|ref|YP_006774926.1| - 2.5e-06 26.7 3.0 4.3e-06 25.9 3.0 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|407464044|ref|YP_006774926.1| - 0.00034 20.6 2.5 0.00049 20.1 2.5 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|407464044|ref|YP_006774926.1| - 0.0044 17.7 0.6 0.008 16.9 0.2 1.6 2 0 0 2 2 2 1 zinc-ribbon family PAH PF02671.21 gi|407464044|ref|YP_006774926.1| - 0.15 12.2 0.5 0.15 12.2 0.5 1.6 2 0 0 2 2 2 0 Paired amphipathic helix repeat Nudix_N_2 PF14803.6 gi|407464044|ref|YP_006774926.1| - 3.6 7.6 7.9 2.2 8.3 1.4 2.2 2 0 0 2 2 2 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|407464045|ref|YP_006774927.1| - 2.8e-08 33.2 3.3 4.7e-08 32.5 3.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|407464045|ref|YP_006774927.1| - 5.7e-07 28.7 2.0 9e-07 28.1 2.0 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|407464045|ref|YP_006774927.1| - 3e-06 27.1 0.6 4.6e-06 26.6 0.6 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|407464045|ref|YP_006774927.1| - 0.00011 22.9 0.3 0.00014 22.5 0.3 1.2 1 0 0 1 1 1 1 zinc-ribbon family UPF0547 PF10571.9 gi|407464045|ref|YP_006774927.1| - 0.00014 21.9 4.9 0.00051 20.1 4.8 1.9 1 1 0 1 1 1 1 Uncharacterised protein family UPF0547 Nudix_N_2 PF14803.6 gi|407464045|ref|YP_006774927.1| - 0.00026 20.8 4.2 0.12 12.3 0.2 2.3 2 0 0 2 2 2 2 Nudix N-terminal zf-NADH-PPase PF09297.11 gi|407464045|ref|YP_006774927.1| - 0.016 14.9 4.1 0.76 9.5 0.2 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain RNA_POL_M_15KD PF02150.16 gi|407464045|ref|YP_006774927.1| - 0.033 14.0 3.2 2.9 7.9 0.5 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit GFA PF04828.14 gi|407464045|ref|YP_006774927.1| - 0.048 14.0 3.0 1.1 9.7 0.1 2.3 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme A2L_zn_ribbon PF08792.10 gi|407464045|ref|YP_006774927.1| - 0.067 12.9 4.1 1.5 8.6 0.3 2.4 2 0 0 2 2 2 0 A2L zinc ribbon domain HypA PF01155.19 gi|407464045|ref|YP_006774927.1| - 0.079 13.0 0.6 0.11 12.6 0.6 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf_UBZ PF18439.1 gi|407464045|ref|YP_006774927.1| - 0.1 12.2 3.2 1.6 8.4 0.1 2.3 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger Prok-RING_1 PF14446.6 gi|407464045|ref|YP_006774927.1| - 0.39 10.7 3.1 0.78 9.7 3.1 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 YhfH PF14149.6 gi|407464045|ref|YP_006774927.1| - 0.54 10.3 4.4 10 6.2 0.5 2.4 1 1 1 2 2 2 0 YhfH-like protein RecR PF02132.15 gi|407464045|ref|YP_006774927.1| - 0.85 9.2 2.6 10 5.8 0.1 2.1 1 1 1 2 2 2 0 RecR protein NOB1_Zn_bind PF08772.11 gi|407464045|ref|YP_006774927.1| - 0.98 9.6 6.8 27 5.0 0.7 2.3 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-tcix PF14952.6 gi|407464045|ref|YP_006774927.1| - 0.99 9.1 5.5 4.5 7.0 0.8 2.2 1 1 1 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding LisH_2 PF16045.5 gi|407464045|ref|YP_006774927.1| - 3.3 6.8 8.5 5.3 6.2 0.7 3.0 3 0 0 3 3 3 0 LisH Amidohydro_1 PF01979.20 gi|407464046|ref|YP_006774928.1| - 6.3e-20 71.8 2.7 1.1e-18 67.7 1.0 3.1 2 1 0 2 2 2 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|407464046|ref|YP_006774928.1| - 7.9e-12 45.4 0.3 1.1e-05 25.1 0.0 3.1 3 0 0 3 3 3 3 Amidohydrolase family TatD_DNase PF01026.21 gi|407464046|ref|YP_006774928.1| - 0.00028 20.4 0.1 0.00054 19.4 0.1 1.6 1 1 0 1 1 1 1 TatD related DNase GDPD_2 PF13653.6 gi|407464046|ref|YP_006774928.1| - 0.18 12.3 0.2 0.58 10.7 0.2 1.9 1 0 0 1 1 1 0 Glycerophosphoryl diester phosphodiesterase family Bep_C_terminal PF17841.1 gi|407464047|ref|YP_006774929.1| - 0.0046 17.2 1.2 22 5.4 0.1 3.4 2 2 1 3 3 3 2 BID domain of Bartonella effector protein (Bep) XPC-binding PF09280.11 gi|407464047|ref|YP_006774929.1| - 1.1 9.0 11.3 3.7 7.4 1.6 4.4 2 2 1 3 3 3 0 XPC-binding domain TetR_C_28 PF17937.1 gi|407464047|ref|YP_006774929.1| - 2.5 8.6 6.2 19 5.8 0.5 3.7 2 2 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PCMT PF01135.19 gi|407464048|ref|YP_006774930.1| - 4.7e-49 167.0 0.0 5.5e-49 166.8 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|407464048|ref|YP_006774930.1| - 1.8e-10 40.8 0.0 2.4e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|407464048|ref|YP_006774930.1| - 2e-07 30.9 0.0 2.9e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F RrnaAD PF00398.20 gi|407464048|ref|YP_006774930.1| - 5.1e-07 29.0 0.0 6e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|407464048|ref|YP_006774930.1| - 1e-06 29.3 0.0 1.5e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|407464048|ref|YP_006774930.1| - 1.8e-06 27.9 0.0 2.3e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit MTS PF05175.14 gi|407464048|ref|YP_006774930.1| - 1.6e-05 24.5 0.0 2.5e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain GidB PF02527.15 gi|407464048|ref|YP_006774930.1| - 4.8e-05 22.8 0.0 7e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PrmA PF06325.13 gi|407464048|ref|YP_006774930.1| - 7.5e-05 22.3 0.0 8.8e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 gi|407464048|ref|YP_006774930.1| - 0.00029 21.4 0.0 0.00044 20.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|407464048|ref|YP_006774930.1| - 0.0003 20.3 0.0 0.00047 19.7 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_18 PF12847.7 gi|407464048|ref|YP_006774930.1| - 0.0011 18.9 0.0 0.0015 18.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|407464048|ref|YP_006774930.1| - 0.0015 18.3 0.0 0.002 17.9 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Fibrillarin PF01269.17 gi|407464048|ref|YP_006774930.1| - 0.005 16.0 0.0 0.007 15.5 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_24 PF13578.6 gi|407464048|ref|YP_006774930.1| - 0.042 14.9 0.0 0.069 14.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 gi|407464048|ref|YP_006774930.1| - 0.044 13.6 0.0 0.054 13.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 gi|407464048|ref|YP_006774930.1| - 0.051 13.0 0.0 0.071 12.5 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Ubie_methyltran PF01209.18 gi|407464048|ref|YP_006774930.1| - 0.061 12.6 0.0 0.082 12.2 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family tRNA_U5-meth_tr PF05958.11 gi|407464048|ref|YP_006774930.1| - 0.11 11.4 0.0 0.16 10.9 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_12 PF08242.12 gi|407464048|ref|YP_006774930.1| - 0.12 13.1 0.0 0.19 12.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.6 gi|407464048|ref|YP_006774930.1| - 0.14 12.1 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 gi|407464048|ref|YP_006774930.1| - 0.21 10.8 0.0 0.27 10.5 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Memo PF01875.17 gi|407464049|ref|YP_006774931.1| - 4e-82 275.4 0.4 4.6e-82 275.2 0.4 1.0 1 0 0 1 1 1 1 Memo-like protein AMMECR1 PF01871.17 gi|407464050|ref|YP_006774932.1| - 4.5e-52 176.0 0.0 5.1e-52 175.8 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 Radical_SAM PF04055.21 gi|407464051|ref|YP_006774933.1| - 9.2e-15 55.4 1.5 9.3e-15 55.4 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|407464051|ref|YP_006774933.1| - 0.051 13.8 1.1 0.062 13.6 0.0 1.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain zf-4CXXC_R1 PF10497.9 gi|407464051|ref|YP_006774933.1| - 1.5 9.1 6.9 2.9 8.2 0.5 3.0 3 0 0 3 3 3 0 Zinc-finger domain of monoamine-oxidase A repressor R1 HSP20 PF00011.21 gi|407464052|ref|YP_006774934.1| - 1.9e-24 85.8 2.4 2.5e-24 85.4 2.4 1.2 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|407464052|ref|YP_006774934.1| - 3.6e-05 23.2 0.0 5.9e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|407464052|ref|YP_006774934.1| - 0.0072 17.3 0.4 0.014 16.4 0.4 1.5 1 0 0 1 1 1 1 CS domain FKBP26_C PF18046.1 gi|407464052|ref|YP_006774934.1| - 0.029 14.5 0.4 4.2 7.5 0.0 2.3 2 0 0 2 2 2 0 FKBP26_C-terminal Mrr_cat PF04471.12 gi|407464053|ref|YP_006774935.1| - 1.9e-05 24.7 0.0 3.1e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Restriction endonuclease DUF4143 PF13635.6 gi|407464053|ref|YP_006774935.1| - 0.0048 17.0 0.1 0.013 15.7 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) Hjc PF01870.18 gi|407464053|ref|YP_006774935.1| - 0.011 15.7 0.0 0.021 14.8 0.0 1.5 1 0 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) HHH_5 PF14520.6 gi|407464053|ref|YP_006774935.1| - 0.016 15.8 0.0 0.033 14.8 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix domain DUF234 PF03008.14 gi|407464053|ref|YP_006774935.1| - 0.06 13.8 0.0 0.12 12.8 0.0 1.6 1 0 0 1 1 1 0 Archaea bacterial proteins of unknown function HhH-GPD PF00730.25 gi|407464053|ref|YP_006774935.1| - 0.088 13.3 0.1 0.2 12.1 0.1 1.6 1 1 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein UPF0102 PF02021.17 gi|407464053|ref|YP_006774935.1| - 0.14 12.4 0.1 0.42 10.9 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein family UPF0102 Copper-bind PF00127.20 gi|407464054|ref|YP_006774936.1| - 0.00013 22.3 0.2 0.00053 20.4 0.0 2.0 2 0 0 2 2 2 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|407464054|ref|YP_006774936.1| - 0.00044 20.3 0.4 0.0019 18.3 0.0 2.1 2 2 0 2 2 2 1 Cupredoxin-like domain EMC3_TMCO1 PF01956.16 gi|407464054|ref|YP_006774936.1| - 0.0057 16.4 0.0 0.008 15.9 0.0 1.3 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like GCN5L1 PF06320.13 gi|407464054|ref|YP_006774936.1| - 0.035 14.2 1.5 0.05 13.8 1.5 1.1 1 0 0 1 1 1 0 GCN5-like protein 1 (GCN5L1) RmuC PF02646.16 gi|407464054|ref|YP_006774936.1| - 0.088 11.9 3.3 0.13 11.4 3.3 1.1 1 0 0 1 1 1 0 RmuC family EDR1 PF14381.6 gi|407464054|ref|YP_006774936.1| - 0.17 11.6 0.1 0.24 11.1 0.1 1.2 1 0 0 1 1 1 0 Ethylene-responsive protein kinase Le-CTR1 LEA_4 PF02987.16 gi|407464054|ref|YP_006774936.1| - 0.29 11.3 5.7 1.7 8.8 1.2 2.4 2 0 0 2 2 2 0 Late embryogenesis abundant protein DUF948 PF06103.11 gi|407464054|ref|YP_006774936.1| - 0.44 10.8 3.7 0.73 10.1 3.7 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) YtxH PF12732.7 gi|407464054|ref|YP_006774936.1| - 0.63 10.6 6.6 1.3 9.6 6.6 1.6 1 1 0 1 1 1 0 YtxH-like protein Rib_5-P_isom_A PF06026.14 gi|407464055|ref|YP_006774937.1| - 1.4e-52 177.7 0.1 1.7e-52 177.5 0.1 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|407464055|ref|YP_006774937.1| - 0.00022 21.2 0.2 0.12 12.3 0.0 2.2 2 0 0 2 2 2 2 DeoR C terminal sensor domain Flagellin_C PF00700.21 gi|407464056|ref|YP_006774938.1| - 0.055 13.8 1.6 0.083 13.3 0.4 2.0 2 0 0 2 2 2 0 Bacterial flagellin C-terminal helical region Ribosomal_L37e PF01907.19 gi|407464057|ref|YP_006774939.1| - 4.5e-21 74.8 12.1 5e-21 74.6 12.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e HypA PF01155.19 gi|407464057|ref|YP_006774939.1| - 0.004 17.2 1.2 0.0044 17.0 1.2 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Cation_ATPase_N PF00690.26 gi|407464057|ref|YP_006774939.1| - 0.027 14.2 0.0 0.039 13.6 0.0 1.2 1 0 0 1 1 1 0 Cation transporter/ATPase, N-terminus zf-ribbon_3 PF13248.6 gi|407464057|ref|YP_006774939.1| - 0.031 13.7 1.5 0.047 13.1 1.5 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_6 PF14599.6 gi|407464057|ref|YP_006774939.1| - 0.032 14.3 1.6 0.047 13.7 1.6 1.3 1 0 0 1 1 1 0 Zinc-ribbon zf-Mss51 PF13824.6 gi|407464057|ref|YP_006774939.1| - 0.042 13.9 3.9 2 8.6 0.2 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DNA_RNApol_7kD PF03604.13 gi|407464057|ref|YP_006774939.1| - 0.079 12.7 3.1 0.079 12.7 3.1 2.1 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Rubredoxin_2 PF18073.1 gi|407464057|ref|YP_006774939.1| - 0.5 10.2 5.3 7.3 6.4 0.1 2.5 2 1 0 2 2 2 0 Rubredoxin metal binding domain DUF2688 PF10892.8 gi|407464057|ref|YP_006774939.1| - 1.5 8.3 5.9 1.3 8.5 3.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2688) LSM PF01423.22 gi|407464058|ref|YP_006774940.1| - 5.4e-22 77.3 0.3 6e-22 77.1 0.3 1.0 1 0 0 1 1 1 1 LSM domain Creatininase PF02633.14 gi|407464059|ref|YP_006774941.1| - 5.2e-50 170.2 0.0 7e-50 169.8 0.0 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase DUF4473 PF14747.6 gi|407464059|ref|YP_006774941.1| - 0.081 13.5 0.2 0.15 12.6 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) HTH_7 PF02796.15 gi|407464059|ref|YP_006774941.1| - 0.11 12.5 0.1 0.26 11.4 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Formyl_trans_N PF00551.19 gi|407464060|ref|YP_006774942.1| - 1.7e-41 142.0 0.0 2.3e-41 141.5 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase ACT_6 PF13740.6 gi|407464060|ref|YP_006774942.1| - 3.9e-06 26.7 0.0 8.6e-06 25.7 0.0 1.6 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|407464060|ref|YP_006774942.1| - 0.017 15.7 0.1 0.065 13.8 0.0 2.0 1 1 0 1 1 1 0 ACT domain DUF1694 PF07997.11 gi|407464060|ref|YP_006774942.1| - 0.043 13.9 0.6 3.2 7.8 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1694) PGM_PMM_I PF02878.16 gi|407464061|ref|YP_006774943.1| - 2.5e-37 127.7 0.0 4.6e-37 126.8 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|407464061|ref|YP_006774943.1| - 4.5e-26 91.5 0.0 2.6e-25 89.0 0.0 2.2 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|407464061|ref|YP_006774943.1| - 4.3e-23 81.7 0.0 7.3e-23 80.9 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|407464061|ref|YP_006774943.1| - 1.2e-10 41.4 0.0 2.8e-10 40.2 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ribosomal_L7Ae PF01248.26 gi|407464062|ref|YP_006774944.1| - 1e-25 89.2 0.1 1.2e-25 89.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|407464062|ref|YP_006774944.1| - 0.0014 18.4 0.0 0.0022 17.8 0.0 1.3 1 0 0 1 1 1 1 PELOTA RNA binding domain Ribosomal_S28e PF01200.18 gi|407464063|ref|YP_006774945.1| - 4.6e-27 93.8 5.7 5.1e-27 93.7 5.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L24e PF01246.20 gi|407464064|ref|YP_006774946.1| - 1.8e-18 66.5 0.6 2.1e-18 66.3 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e Lar_restr_allev PF14354.6 gi|407464064|ref|YP_006774946.1| - 0.023 15.1 0.1 0.027 14.9 0.1 1.2 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-FLZ PF04570.14 gi|407464064|ref|YP_006774946.1| - 0.028 13.9 0.2 0.048 13.1 0.2 1.4 1 1 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 DUF2256 PF10013.9 gi|407464064|ref|YP_006774946.1| - 0.052 13.7 5.7 5.8 7.1 0.1 3.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) NDK PF00334.19 gi|407464065|ref|YP_006774947.1| - 1.6e-49 167.4 0.0 1.8e-49 167.2 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase GTP_EFTU PF00009.27 gi|407464066|ref|YP_006774948.1| - 1.1e-32 113.1 0.0 2.5e-32 112.0 0.0 1.6 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 gi|407464066|ref|YP_006774948.1| - 1.4e-21 76.5 1.7 2.8e-21 75.6 0.8 2.0 2 0 0 2 2 2 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 gi|407464066|ref|YP_006774948.1| - 1.4e-20 73.0 0.0 4.4e-20 71.4 0.0 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 MMR_HSR1 PF01926.23 gi|407464066|ref|YP_006774948.1| - 7.3e-08 32.5 0.5 4.7e-07 29.9 0.0 2.6 3 1 0 3 3 3 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 gi|407464066|ref|YP_006774948.1| - 1.7e-06 28.3 0.0 1.1e-05 25.7 0.0 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 Roc PF08477.13 gi|407464066|ref|YP_006774948.1| - 9.5e-05 22.6 0.0 0.00027 21.1 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 gi|407464066|ref|YP_006774948.1| - 0.0001 22.2 0.0 0.00046 20.1 0.0 2.1 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 gi|407464066|ref|YP_006774948.1| - 0.00082 19.5 0.2 0.16 12.0 0.0 3.0 2 1 0 2 2 2 1 Dynamin family Ras PF00071.22 gi|407464066|ref|YP_006774948.1| - 0.0057 16.3 0.0 0.023 14.3 0.0 2.0 1 1 0 1 1 1 1 Ras family cobW PF02492.19 gi|407464066|ref|YP_006774948.1| - 0.077 12.6 0.1 2 7.9 0.0 2.5 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Thioredoxin PF00085.20 gi|407464067|ref|YP_006774949.1| - 8.9e-30 102.7 0.1 1.1e-29 102.4 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|407464067|ref|YP_006774949.1| - 1.9e-08 34.7 0.1 5.1e-08 33.3 0.1 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 gi|407464067|ref|YP_006774949.1| - 1.1e-07 31.5 0.3 1.8e-07 30.8 0.3 1.3 1 1 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 gi|407464067|ref|YP_006774949.1| - 1.4e-07 31.7 0.1 5.8e-07 29.8 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_9 PF14595.6 gi|407464067|ref|YP_006774949.1| - 3.9e-07 29.9 0.2 5.2e-07 29.5 0.2 1.3 1 1 0 1 1 1 1 Thioredoxin Phosducin PF02114.16 gi|407464067|ref|YP_006774949.1| - 9e-06 24.8 0.0 9.3e-06 24.8 0.0 1.1 1 0 0 1 1 1 1 Phosducin Redoxin PF08534.10 gi|407464067|ref|YP_006774949.1| - 1.2e-05 25.0 0.0 1.6e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 gi|407464067|ref|YP_006774949.1| - 0.00055 19.8 0.0 0.00066 19.6 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_7 PF13899.6 gi|407464067|ref|YP_006774949.1| - 0.00096 19.3 0.1 0.0016 18.6 0.1 1.4 1 0 0 1 1 1 1 Thioredoxin-like TraF PF13728.6 gi|407464067|ref|YP_006774949.1| - 0.0033 17.3 0.1 0.0048 16.8 0.1 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein HyaE PF07449.11 gi|407464067|ref|YP_006774949.1| - 0.0084 16.1 0.0 0.016 15.1 0.0 1.4 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Toxin-deaminase PF14424.6 gi|407464067|ref|YP_006774949.1| - 0.014 15.5 0.0 0.023 14.8 0.0 1.5 1 0 0 1 1 1 0 The BURPS668_1122 family of deaminases ERp29_N PF07912.13 gi|407464067|ref|YP_006774949.1| - 0.048 13.8 0.0 0.089 12.9 0.0 1.4 1 1 0 1 1 1 0 ERp29, N-terminal domain TF_Zn_Ribbon PF08271.12 gi|407464068|ref|YP_006774950.1| - 0.019 14.5 1.4 0.84 9.2 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-RRN7 PF11781.8 gi|407464068|ref|YP_006774950.1| - 0.036 13.7 0.2 0.036 13.7 0.2 2.2 1 1 1 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF1451 PF07295.11 gi|407464068|ref|YP_006774950.1| - 0.077 13.0 0.2 0.095 12.7 0.2 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain zf-C2H2 PF00096.26 gi|407464068|ref|YP_006774950.1| - 0.091 13.3 1.3 8.2 7.1 0.1 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type DYW_deaminase PF14432.6 gi|407464068|ref|YP_006774950.1| - 0.091 12.6 0.2 0.1 12.5 0.2 1.1 1 0 0 1 1 1 0 DYW family of nucleic acid deaminases zf-C2H2_4 PF13894.6 gi|407464068|ref|YP_006774950.1| - 0.13 13.2 1.8 3.6 8.7 0.2 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger HypA PF01155.19 gi|407464068|ref|YP_006774950.1| - 0.15 12.1 0.2 0.17 11.9 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA He_PIG PF05345.12 gi|407464069|ref|YP_006774951.1| - 0.0022 18.1 0.1 0.0093 16.1 0.0 2.1 2 0 0 2 2 2 1 Putative Ig domain DUF5343 PF17278.2 gi|407464069|ref|YP_006774951.1| - 0.013 15.5 1.0 3.4 7.7 0.0 2.8 1 1 2 3 3 3 0 Family of unknown function (DUF5343) Occludin_ELL PF07303.13 gi|407464069|ref|YP_006774951.1| - 2.8 8.7 15.1 3.6 8.4 0.8 3.2 3 0 0 3 3 3 0 Occludin homology domain Archease PF01951.16 gi|407464070|ref|YP_006774952.1| - 5.6e-32 110.9 0.5 6.2e-32 110.7 0.5 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) RdgC PF04381.12 gi|407464070|ref|YP_006774952.1| - 0.023 14.0 0.1 0.027 13.7 0.1 1.2 1 0 0 1 1 1 0 Putative exonuclease, RdgC Glyoxalase PF00903.25 gi|407464071|ref|YP_006774953.1| - 0.00028 21.1 0.0 0.00051 20.2 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|407464071|ref|YP_006774953.1| - 0.0089 16.8 0.0 0.015 16.1 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain ADH_N PF08240.12 gi|407464072|ref|YP_006774954.1| - 2.9e-24 85.0 0.5 4.6e-24 84.4 0.5 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 gi|407464072|ref|YP_006774954.1| - 2.9e-08 33.4 0.0 7.6e-08 32.1 0.0 1.7 2 1 0 2 2 2 1 Glucose dehydrogenase C-terminus ADH_zinc_N PF00107.26 gi|407464072|ref|YP_006774954.1| - 3.7e-06 26.9 0.0 7.2e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|407464072|ref|YP_006774954.1| - 0.00022 22.3 0.0 0.00046 21.3 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase UPF0444 PF15475.6 gi|407464072|ref|YP_006774954.1| - 0.14 12.4 0.0 0.32 11.3 0.0 1.5 1 0 0 1 1 1 0 Transmembrane protein C12orf23, UPF0444 PALP PF00291.25 gi|407464072|ref|YP_006774954.1| - 0.18 11.2 0.0 0.5 9.7 0.0 1.6 1 1 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme SNARE_assoc PF09335.11 gi|407464073|ref|YP_006774955.1| - 1.5e-19 70.6 5.2 1.9e-19 70.3 4.5 1.5 1 1 0 1 1 1 1 SNARE associated Golgi protein FUN14 PF04930.15 gi|407464073|ref|YP_006774955.1| - 1.7 9.1 5.2 13 6.3 0.2 2.8 2 1 1 3 3 3 0 FUN14 family DUF72 PF01904.18 gi|407464074|ref|YP_006774956.1| - 7.2e-44 150.5 0.0 8.3e-44 150.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 UDG PF03167.19 gi|407464075|ref|YP_006774957.1| - 3.8e-30 104.9 0.0 6e-30 104.3 0.0 1.3 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Nitroreductase PF00881.24 gi|407464076|ref|YP_006774958.1| - 2.6e-07 30.8 0.0 3e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family HTH_9 PF08221.11 gi|407464076|ref|YP_006774958.1| - 0.18 11.9 0.0 0.27 11.4 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF3794 PF12673.7 gi|407464077|ref|YP_006774959.1| - 0.0065 16.7 0.0 8.5 6.7 0.0 3.4 3 1 1 4 4 4 2 Domain of unknown function (DUF3794) CDC45 PF02724.14 gi|407464077|ref|YP_006774959.1| - 1.4 7.1 19.8 1.9 6.7 19.8 1.2 1 0 0 1 1 1 0 CDC45-like protein VSG_B PF13206.6 gi|407464077|ref|YP_006774959.1| - 3 7.0 12.9 4.4 6.5 12.9 1.2 1 0 0 1 1 1 0 Trypanosomal VSG domain Paramyxo_ncap PF00973.19 gi|407464077|ref|YP_006774959.1| - 3 6.7 13.1 4.6 6.0 13.1 1.2 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Atg14 PF10186.9 gi|407464077|ref|YP_006774959.1| - 3 6.8 10.3 4.3 6.3 10.3 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Nop53 PF07767.11 gi|407464077|ref|YP_006774959.1| - 5.2 6.3 29.4 8.1 5.7 29.4 1.2 1 0 0 1 1 1 0 Nop53 (60S ribosomal biogenesis) AAA_11 PF13086.6 gi|407464077|ref|YP_006774959.1| - 8.1 6.1 13.0 15 5.3 13.0 1.5 1 0 0 1 1 1 0 AAA domain Presenilin PF01080.17 gi|407464077|ref|YP_006774959.1| - 8.3 5.1 9.4 15 4.2 9.4 1.4 1 0 0 1 1 1 0 Presenilin SDA1 PF05285.12 gi|407464077|ref|YP_006774959.1| - 9.1 5.6 32.0 0.22 10.9 25.3 1.6 2 0 0 2 2 2 0 SDA1 DUF3106 PF11304.8 gi|407464078|ref|YP_006774960.1| - 1e-05 25.9 23.3 0.34 11.4 0.1 6.6 2 2 4 6 6 6 3 Protein of unknown function (DUF3106) OHCU_decarbox PF09349.10 gi|407464078|ref|YP_006774960.1| - 0.004 17.7 0.2 0.004 17.7 0.2 2.7 2 2 0 2 2 2 1 OHCU decarboxylase Apolipoprotein PF01442.18 gi|407464078|ref|YP_006774960.1| - 0.56 10.0 13.9 6.7 6.5 1.0 3.2 2 1 0 3 3 3 0 Apolipoprotein A1/A4/E domain Pullulanase_Ins PF18494.1 gi|407464078|ref|YP_006774960.1| - 7.4 7.1 6.2 6.2 7.4 0.2 3.4 4 1 0 4 4 4 0 Pullulanase Ins domain Mg_chelatase_C PF13335.6 gi|407464078|ref|YP_006774960.1| - 8.9 7.0 6.8 19 5.9 0.0 4.6 4 2 1 5 5 5 0 Magnesium chelatase, subunit ChlI C-terminal DUF1059 PF06348.11 gi|407464079|ref|YP_006774961.1| - 1.7e-18 66.6 0.4 1.9e-18 66.4 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) Sina PF03145.16 gi|407464079|ref|YP_006774961.1| - 0.049 13.6 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 Seven in absentia protein family LprI PF07007.12 gi|407464080|ref|YP_006774962.1| - 0.13 12.9 0.0 0.16 12.6 0.0 1.2 1 0 0 1 1 1 0 Lysozyme inhibitor LprI DUF5300 PF17224.3 gi|407464081|ref|YP_006774963.1| - 2.7e-05 24.3 0.0 4e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5300) Mut7-C PF01927.16 gi|407464083|ref|YP_006774965.1| - 2.6e-40 137.9 0.2 3e-40 137.7 0.2 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain DUF5615 PF18480.1 gi|407464083|ref|YP_006774965.1| - 0.00037 20.2 0.0 0.00072 19.3 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) PIN_4 PF13638.6 gi|407464083|ref|YP_006774965.1| - 0.0098 16.2 0.4 0.02 15.2 0.1 1.6 2 0 0 2 2 2 1 PIN domain PIN_10 PF18478.1 gi|407464083|ref|YP_006774965.1| - 0.064 13.5 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 PIN like domain SinI PF08671.10 gi|407464083|ref|YP_006774965.1| - 2.9 7.8 8.4 24 4.9 3.0 3.3 2 1 0 2 2 2 0 Anti-repressor SinI HypA PF01155.19 gi|407464084|ref|YP_006774966.1| - 0.036 14.1 0.2 0.041 13.9 0.2 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PolC_DP2 PF03833.13 gi|407464084|ref|YP_006774966.1| - 0.085 10.7 0.2 0.089 10.6 0.2 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-C6H2 PF15801.5 gi|407464084|ref|YP_006774966.1| - 0.12 12.7 2.5 0.17 12.2 2.5 1.2 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding SET PF00856.28 gi|407464085|ref|YP_006774967.1| - 0.051 14.0 0.0 0.073 13.5 0.0 1.3 1 0 0 1 1 1 0 SET domain Baculo_LEF-11 PF06385.12 gi|407464086|ref|YP_006774968.1| - 0.041 14.4 0.9 0.08 13.4 0.1 1.8 2 0 0 2 2 2 0 Baculovirus LEF-11 protein Aldo_ket_red PF00248.21 gi|407464087|ref|YP_006774969.1| - 2e-61 207.8 0.0 2.3e-61 207.6 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family FidL_like PF15941.5 gi|407464087|ref|YP_006774969.1| - 0.055 13.9 0.0 0.17 12.3 0.0 1.8 1 0 0 1 1 1 0 FidL-like putative membrane protein HD_4 PF13328.6 gi|407464088|ref|YP_006774970.1| - 5.6e-11 42.4 0.0 7.4e-11 42.0 0.0 1.1 1 0 0 1 1 1 1 HD domain GIT1_C PF12205.8 gi|407464089|ref|YP_006774971.1| - 0.0098 16.0 0.0 0.023 14.8 0.0 1.6 1 1 1 2 2 2 1 G protein-coupled receptor kinase-interacting protein 1 C term HTH_48 PF17906.1 gi|407464089|ref|YP_006774971.1| - 0.039 14.1 0.1 0.12 12.5 0.1 1.8 1 0 0 1 1 1 0 HTH domain in Mos1 transposase DUF3437 PF11919.8 gi|407464089|ref|YP_006774971.1| - 0.041 13.8 0.0 0.081 12.8 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3437) tRNA-synt_His PF13393.6 gi|407464090|ref|YP_006774972.1| - 3e-45 154.8 0.0 4e-45 154.4 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|407464090|ref|YP_006774972.1| - 1.9e-12 47.5 1.3 7.1e-12 45.7 1.3 1.9 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|407464090|ref|YP_006774972.1| - 4.1e-10 39.7 0.1 1.3e-09 38.1 0.1 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2d PF01409.20 gi|407464090|ref|YP_006774972.1| - 0.0017 17.9 0.0 0.0036 16.8 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Tup_N PF08581.10 gi|407464090|ref|YP_006774972.1| - 0.041 14.2 1.4 0.087 13.1 0.7 1.9 2 0 0 2 2 2 0 Tup N-terminal DUF2812 PF11193.8 gi|407464090|ref|YP_006774972.1| - 0.055 13.7 0.1 0.055 13.7 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2812) RcpB PF16971.5 gi|407464090|ref|YP_006774972.1| - 1.8 8.4 5.8 0.89 9.4 0.6 2.1 2 0 0 2 2 2 0 Rough colony protein B, tight adherence - tad - subunit eIF-6 PF01912.18 gi|407464091|ref|YP_006774973.1| - 7.5e-63 211.5 3.4 8.8e-63 211.3 3.4 1.0 1 0 0 1 1 1 1 eIF-6 family Fer4 PF00037.27 gi|407464092|ref|YP_006774974.1| - 2e-09 36.9 12.7 5.9e-06 25.9 1.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|407464092|ref|YP_006774974.1| - 2.3e-09 37.7 4.4 0.00011 22.8 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|407464092|ref|YP_006774974.1| - 1.1e-07 31.8 14.9 5.3e-07 29.7 4.7 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|407464092|ref|YP_006774974.1| - 4e-07 30.9 5.4 0.0017 19.3 2.4 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|407464092|ref|YP_006774974.1| - 4.6e-07 30.2 0.4 0.015 15.7 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|407464092|ref|YP_006774974.1| - 7.9e-07 29.2 6.5 6.1e-06 26.3 6.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|407464092|ref|YP_006774974.1| - 1.6e-06 28.2 5.2 0.0026 17.9 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|407464092|ref|YP_006774974.1| - 2.8e-05 24.0 13.1 0.012 15.6 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|407464092|ref|YP_006774974.1| - 3e-05 24.5 5.9 0.028 14.9 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|407464092|ref|YP_006774974.1| - 0.00046 20.5 5.9 0.041 14.4 1.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|407464092|ref|YP_006774974.1| - 0.00048 20.6 4.5 0.03 14.9 6.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|407464092|ref|YP_006774974.1| - 0.00066 19.6 11.6 0.051 13.7 3.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|407464092|ref|YP_006774974.1| - 0.0028 17.8 7.3 0.0053 16.9 5.4 2.1 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|407464092|ref|YP_006774974.1| - 0.011 16.5 1.4 4.4 8.2 0.4 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|407464092|ref|YP_006774974.1| - 0.098 13.4 13.4 0.12 13.1 3.4 2.8 3 1 0 3 3 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|407464092|ref|YP_006774974.1| - 0.11 13.4 15.1 2.2 9.4 1.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|407464093|ref|YP_006774975.1| - 6.3e-09 36.3 27.5 9.7e-05 22.9 11.8 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|407464093|ref|YP_006774975.1| - 8.6e-09 34.9 11.5 0.00012 21.7 3.8 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|407464093|ref|YP_006774975.1| - 3.2e-08 34.4 18.1 3.5e-06 27.8 8.0 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|407464093|ref|YP_006774975.1| - 4.5e-07 29.9 9.6 1.4e-05 25.1 10.6 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|407464093|ref|YP_006774975.1| - 4.5e-07 29.9 8.8 0.0071 16.4 0.2 2.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|407464093|ref|YP_006774975.1| - 2.6e-06 27.3 10.9 0.004 17.2 4.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|407464093|ref|YP_006774975.1| - 4.8e-06 26.9 16.8 3.4e-05 24.2 10.2 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|407464093|ref|YP_006774975.1| - 5.5e-06 26.4 9.8 0.00012 22.1 10.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|407464093|ref|YP_006774975.1| - 0.00035 20.5 11.9 0.0063 16.5 1.1 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|407464093|ref|YP_006774975.1| - 0.00077 20.0 7.1 0.0048 17.4 8.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|407464093|ref|YP_006774975.1| - 0.0099 16.4 9.4 0.76 10.4 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|407464093|ref|YP_006774975.1| - 0.012 16.1 10.7 0.46 11.1 0.4 3.1 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|407464093|ref|YP_006774975.1| - 0.012 15.8 9.7 0.16 12.2 7.4 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|407464093|ref|YP_006774975.1| - 0.27 12.3 15.4 1.6 9.9 5.8 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|407464093|ref|YP_006774975.1| - 0.9 10.3 9.5 2.2 9.1 1.6 2.7 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|407464093|ref|YP_006774975.1| - 1.3 9.9 7.8 3.8 8.4 0.2 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain DNA_pol3_delta2 PF13177.6 gi|407464094|ref|YP_006774976.1| - 9.7e-15 54.7 0.1 1.8e-11 44.1 0.2 2.3 1 1 1 2 2 2 2 DNA polymerase III, delta subunit AAA PF00004.29 gi|407464094|ref|YP_006774976.1| - 2.3e-11 44.3 0.7 5.7e-11 43.0 0.1 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rep_fac_C PF08542.11 gi|407464094|ref|YP_006774976.1| - 7.5e-11 42.3 1.1 1.3e-10 41.5 0.3 1.9 2 0 0 2 2 2 1 Replication factor C C-terminal domain AAA_16 PF13191.6 gi|407464094|ref|YP_006774976.1| - 3.7e-05 24.2 0.0 0.006 17.0 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 gi|407464094|ref|YP_006774976.1| - 0.00015 21.5 0.0 0.00045 20.0 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_3 PF07726.11 gi|407464094|ref|YP_006774976.1| - 0.0002 21.2 0.0 0.00039 20.3 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|407464094|ref|YP_006774976.1| - 0.00023 21.5 0.8 0.043 14.1 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_assoc_2 PF16193.5 gi|407464094|ref|YP_006774976.1| - 0.00047 20.4 0.1 0.0014 18.9 0.1 1.9 1 0 0 1 1 1 1 AAA C-terminal domain Rad17 PF03215.15 gi|407464094|ref|YP_006774976.1| - 0.0015 18.5 0.0 0.01 15.8 0.0 2.2 2 1 0 2 2 2 1 Rad17 P-loop domain Mg_chelatase PF01078.21 gi|407464094|ref|YP_006774976.1| - 0.0025 17.2 0.1 0.21 10.9 0.0 2.5 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI TniB PF05621.11 gi|407464094|ref|YP_006774976.1| - 0.0026 17.2 0.1 0.27 10.6 0.0 2.4 2 0 0 2 2 2 1 Bacterial TniB protein DNA_pol3_delta PF06144.13 gi|407464094|ref|YP_006774976.1| - 0.0029 17.4 0.1 0.0075 16.1 0.1 1.6 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_24 PF13479.6 gi|407464094|ref|YP_006774976.1| - 0.0088 15.8 0.8 0.21 11.3 0.1 2.2 1 1 1 2 2 2 1 AAA domain ResIII PF04851.15 gi|407464094|ref|YP_006774976.1| - 0.017 15.2 0.1 0.62 10.0 0.0 2.4 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit AAA_18 PF13238.6 gi|407464094|ref|YP_006774976.1| - 0.032 14.8 0.2 0.085 13.4 0.1 2.0 2 1 0 2 2 1 0 AAA domain DEAD PF00270.29 gi|407464094|ref|YP_006774976.1| - 0.032 14.0 0.8 0.93 9.2 0.1 2.4 1 1 0 2 2 2 0 DEAD/DEAH box helicase PhoH PF02562.16 gi|407464094|ref|YP_006774976.1| - 0.041 13.3 0.1 5.9 6.3 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein Sigma54_activat PF00158.26 gi|407464094|ref|YP_006774976.1| - 0.053 13.2 0.0 8.3 6.1 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_5 PF07728.14 gi|407464094|ref|YP_006774976.1| - 0.057 13.4 0.5 1.1 9.2 0.5 2.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) Sld5 PF05916.11 gi|407464095|ref|YP_006774977.1| - 4.5e-08 33.5 0.4 6.2e-08 33.1 0.4 1.2 1 0 0 1 1 1 1 GINS complex protein DUF620 PF04788.12 gi|407464095|ref|YP_006774977.1| - 0.002 17.6 0.1 0.0027 17.2 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF620) RFXA_RFXANK_bdg PF15289.6 gi|407464095|ref|YP_006774977.1| - 0.06 13.7 0.0 0.19 12.0 0.0 1.8 2 0 0 2 2 2 0 Regulatory factor X-associated C-terminal binding domain PYRIN PF02758.16 gi|407464095|ref|YP_006774977.1| - 0.071 13.3 0.7 0.12 12.5 0.7 1.4 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain MCM PF00493.23 gi|407464096|ref|YP_006774978.1| - 1.1e-91 305.9 0.0 1.7e-91 305.3 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|407464096|ref|YP_006774978.1| - 1e-34 119.1 0.1 1.8e-34 118.3 0.1 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|407464096|ref|YP_006774978.1| - 4.4e-23 81.5 0.6 9.2e-23 80.5 0.6 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 gi|407464096|ref|YP_006774978.1| - 1.1e-10 42.1 0.8 3.1e-10 40.6 0.8 1.8 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 gi|407464096|ref|YP_006774978.1| - 3.6e-06 26.5 0.0 0.00026 20.4 0.0 2.5 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|407464096|ref|YP_006774978.1| - 3.7e-05 23.7 0.0 0.00022 21.2 0.0 2.4 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|407464096|ref|YP_006774978.1| - 0.0015 18.4 0.0 0.0048 16.8 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 gi|407464097|ref|YP_006774979.1| - 1.7e-26 93.0 0.2 6.7e-26 91.1 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|407464097|ref|YP_006774979.1| - 4.1e-12 46.4 1.6 6.5e-10 39.3 0.0 3.8 3 1 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|407464097|ref|YP_006774979.1| - 2.3e-10 40.8 0.4 4.4e-10 39.8 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_5 PF14520.6 gi|407464097|ref|YP_006774979.1| - 2.1e-09 37.8 1.4 8.3e-09 35.9 1.4 2.1 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|407464097|ref|YP_006774979.1| - 5e-06 26.5 0.4 8.6e-05 22.6 0.0 2.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|407464097|ref|YP_006774979.1| - 3.4e-05 23.6 0.0 9.6e-05 22.1 0.0 1.8 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda AAA_25 PF13481.6 gi|407464097|ref|YP_006774979.1| - 0.03 13.9 0.0 0.31 10.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|407464097|ref|YP_006774979.1| - 0.041 13.0 0.0 0.081 12.0 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein DnaB_C PF03796.15 gi|407464097|ref|YP_006774979.1| - 0.24 10.7 1.4 0.38 10.0 0.0 1.9 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain Glycos_transf_4 PF00953.21 gi|407464098|ref|YP_006774980.1| - 1e-28 100.3 16.5 1e-28 100.3 16.5 2.1 3 0 0 3 3 3 1 Glycosyl transferase family 4 Colicin_V PF02674.16 gi|407464099|ref|YP_006774981.1| - 0.14 12.1 9.1 0.16 11.9 9.1 1.0 1 0 0 1 1 1 0 Colicin V production protein DUF1385 PF07136.11 gi|407464099|ref|YP_006774981.1| - 0.23 10.7 2.7 0.25 10.6 2.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) Phage_holin_3_6 PF07332.11 gi|407464099|ref|YP_006774981.1| - 0.96 9.5 5.8 1.2 9.3 5.8 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Hexapep PF00132.24 gi|407464100|ref|YP_006774982.1| - 5e-28 95.8 11.8 2.7e-10 39.6 0.1 4.3 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|407464100|ref|YP_006774982.1| - 1.1e-20 73.0 7.0 8.2e-11 41.5 3.2 4.2 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase Trm112p PF03966.16 gi|407464101|ref|YP_006774983.1| - 9e-06 26.2 0.5 3.4e-05 24.3 0.2 2.1 2 1 0 2 2 2 1 Trm112p-like protein GFO_IDH_MocA PF01408.22 gi|407464102|ref|YP_006774984.1| - 1.8e-25 90.1 0.0 3.7e-25 89.1 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|407464102|ref|YP_006774984.1| - 1.5e-06 28.2 0.1 3.5e-06 27.0 0.1 1.7 1 1 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain 2-Hacid_dh_C PF02826.19 gi|407464102|ref|YP_006774984.1| - 0.0081 15.5 0.0 0.019 14.4 0.0 1.7 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|407464102|ref|YP_006774984.1| - 0.051 13.1 0.3 0.34 10.5 0.0 2.3 3 0 0 3 3 3 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Aminotran_4 PF01063.19 gi|407464103|ref|YP_006774985.1| - 2.3e-46 158.4 0.0 2.8e-46 158.2 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV CTP_transf_like PF01467.26 gi|407464104|ref|YP_006774986.1| - 0.0013 19.0 0.0 0.0026 18.0 0.0 1.5 2 0 0 2 2 2 1 Cytidylyltransferase-like NAD_binding_1 PF00175.21 gi|407464105|ref|YP_006774987.1| - 3.9e-12 46.8 0.0 7.3e-12 45.9 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|407464105|ref|YP_006774987.1| - 2.7e-08 34.1 0.0 4e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Methyltransf_34 PF11312.8 gi|407464105|ref|YP_006774987.1| - 0.046 13.0 0.0 0.056 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase NAD_binding_6 PF08030.12 gi|407464105|ref|YP_006774987.1| - 0.096 12.8 0.0 0.25 11.4 0.0 1.8 2 0 0 2 2 2 0 Ferric reductase NAD binding domain HEAT_2 PF13646.6 gi|407464106|ref|YP_006774988.1| - 5.7e-16 58.7 0.5 1.3e-09 38.3 0.4 2.1 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 gi|407464106|ref|YP_006774988.1| - 1.2e-10 40.6 0.2 0.019 15.2 0.0 4.2 4 0 0 4 4 4 3 HEAT repeat HEAT_EZ PF13513.6 gi|407464106|ref|YP_006774988.1| - 8.5e-09 35.7 0.4 0.029 14.9 0.0 3.7 3 1 1 4 4 4 3 HEAT-like repeat Cnd1 PF12717.7 gi|407464106|ref|YP_006774988.1| - 0.00017 21.7 0.8 0.26 11.3 0.0 3.4 1 1 2 3 3 3 2 non-SMC mitotic condensation complex subunit 1 Cohesin_HEAT PF12765.7 gi|407464106|ref|YP_006774988.1| - 0.0027 18.0 4.1 0.99 9.8 0.1 3.8 3 1 1 4 4 4 2 HEAT repeat associated with sister chromatid cohesion V-ATPase_H_C PF11698.8 gi|407464106|ref|YP_006774988.1| - 0.017 15.3 1.8 0.17 12.0 0.5 3.0 1 1 1 2 2 2 0 V-ATPase subunit H HEAT_PBS PF03130.16 gi|407464106|ref|YP_006774988.1| - 0.55 11.1 2.8 2.8 8.9 0.1 3.1 4 0 0 4 4 4 0 PBS lyase HEAT-like repeat Alba PF01918.21 gi|407464107|ref|YP_006774989.1| - 1.6e-11 43.8 0.8 6.9e-11 41.8 0.1 2.1 1 1 1 2 2 2 1 Alba Waikav_capsid_1 PF12264.8 gi|407464107|ref|YP_006774989.1| - 0.12 11.9 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Waikavirus capsid protein 1 PEP_mutase PF13714.6 gi|407464108|ref|YP_006774990.1| - 1.1e-51 175.6 0.0 1.4e-51 175.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.21 gi|407464108|ref|YP_006774990.1| - 4.8e-15 55.0 0.0 7.5e-15 54.4 0.0 1.2 1 0 0 1 1 1 1 Isocitrate lyase family Pantoate_transf PF02548.15 gi|407464108|ref|YP_006774990.1| - 0.01 15.3 0.2 0.31 10.4 0.0 2.7 2 1 1 3 3 3 0 Ketopantoate hydroxymethyltransferase PadR PF03551.14 gi|407464109|ref|YP_006774991.1| - 4.7e-12 45.7 0.1 1e-11 44.6 0.1 1.6 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|407464109|ref|YP_006774991.1| - 1.5e-05 24.9 1.5 9.5e-05 22.3 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix Mrr_N PF14338.6 gi|407464109|ref|YP_006774991.1| - 0.0013 18.9 0.4 0.012 15.7 0.1 2.5 3 0 0 3 3 3 1 Mrr N-terminal domain RTP PF02334.16 gi|407464109|ref|YP_006774991.1| - 0.0014 19.3 1.4 0.017 15.7 0.0 2.4 1 1 1 2 2 2 1 Replication terminator protein DUF4364 PF14277.6 gi|407464109|ref|YP_006774991.1| - 0.036 13.8 1.1 0.089 12.5 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4364) DUF4423 PF14394.6 gi|407464109|ref|YP_006774991.1| - 0.16 11.7 1.9 1.2 8.9 1.9 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) Stork_head PF10264.9 gi|407464109|ref|YP_006774991.1| - 0.16 12.2 0.0 0.4 10.9 0.0 1.7 1 0 0 1 1 1 0 Winged helix Storkhead-box1 domain FAD_binding_2 PF00890.24 gi|407464110|ref|YP_006774992.1| - 2.7e-97 326.5 0.2 3.4e-97 326.2 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|407464110|ref|YP_006774992.1| - 1.9e-36 124.8 0.9 3.2e-36 124.1 0.9 1.4 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|407464110|ref|YP_006774992.1| - 6.9e-07 28.8 0.0 0.00037 19.8 0.0 2.7 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|407464110|ref|YP_006774992.1| - 0.00022 20.6 0.4 0.001 18.4 0.2 2.1 2 0 0 2 2 2 1 Thi4 family FAD_oxidored PF12831.7 gi|407464110|ref|YP_006774992.1| - 0.0029 17.0 2.6 0.021 14.2 0.5 2.4 3 0 0 3 3 3 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|407464110|ref|YP_006774992.1| - 0.0046 16.1 1.7 0.044 12.9 1.7 2.2 1 1 0 1 1 1 1 Glucose inhibited division protein A DAO PF01266.24 gi|407464110|ref|YP_006774992.1| - 0.059 12.9 0.4 0.47 10.0 0.2 2.2 2 1 0 2 2 2 0 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|407464110|ref|YP_006774992.1| - 0.084 11.6 0.7 2.9 6.5 0.2 2.5 3 0 0 3 3 3 0 HI0933-like protein Lycopene_cycl PF05834.12 gi|407464110|ref|YP_006774992.1| - 0.15 11.1 0.3 0.27 10.3 0.3 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein Sdh_cyt PF01127.22 gi|407464111|ref|YP_006774993.1| - 1.1e-08 35.1 4.0 2e-08 34.3 3.5 1.6 1 1 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Fumarate_red_D PF02313.17 gi|407464111|ref|YP_006774993.1| - 0.0078 16.3 2.9 0.042 14.0 0.1 2.2 2 0 0 2 2 2 1 Fumarate reductase subunit D Fumarate_red_C PF02300.17 gi|407464111|ref|YP_006774993.1| - 1.7 8.8 4.4 0.49 10.5 1.0 1.7 2 0 0 2 2 2 0 Fumarate reductase subunit C Sdh_cyt PF01127.22 gi|407464112|ref|YP_006774994.1| - 2.8e-07 30.6 3.0 3.4e-07 30.3 3.0 1.2 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Fumarate_red_D PF02313.17 gi|407464112|ref|YP_006774994.1| - 0.078 13.1 2.7 0.11 12.6 2.7 1.3 1 0 0 1 1 1 0 Fumarate reductase subunit D DUF4405 PF14358.6 gi|407464112|ref|YP_006774994.1| - 0.14 12.7 0.5 0.14 12.7 0.5 2.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4405) DUF4179 PF13786.6 gi|407464112|ref|YP_006774994.1| - 1.6 9.3 3.4 6.7 7.3 3.4 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4179) Fer2_3 PF13085.6 gi|407464113|ref|YP_006774995.1| - 2e-30 105.0 0.0 4e-30 104.0 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|407464113|ref|YP_006774995.1| - 2e-11 44.2 2.0 2e-11 44.2 2.0 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|407464113|ref|YP_006774995.1| - 3.3e-10 39.9 2.5 3.3e-10 39.9 2.5 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|407464113|ref|YP_006774995.1| - 6e-09 36.3 11.6 1.2e-07 32.2 2.3 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|407464113|ref|YP_006774995.1| - 6.6e-09 36.2 13.7 3e-07 30.9 4.1 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|407464113|ref|YP_006774995.1| - 2.2e-08 34.1 11.4 1.8e-07 31.2 2.3 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|407464113|ref|YP_006774995.1| - 4.4e-07 30.7 2.2 4.4e-07 30.7 2.2 2.1 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|407464113|ref|YP_006774995.1| - 3.7e-05 23.9 6.3 0.025 14.8 0.3 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer2 PF00111.27 gi|407464113|ref|YP_006774995.1| - 0.00015 21.7 1.6 0.00019 21.3 0.2 1.9 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4 PF00037.27 gi|407464113|ref|YP_006774995.1| - 0.00015 21.4 1.7 0.00015 21.4 1.7 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|407464113|ref|YP_006774995.1| - 0.019 15.0 4.1 0.019 15.0 4.1 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|407464113|ref|YP_006774995.1| - 0.019 15.0 1.9 0.019 15.0 1.9 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|407464113|ref|YP_006774995.1| - 0.13 12.9 1.3 0.13 12.9 1.3 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|407464113|ref|YP_006774995.1| - 0.23 11.6 13.9 0.15 12.2 8.4 2.8 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|407464113|ref|YP_006774995.1| - 0.85 10.7 21.4 0.38 11.8 4.6 3.2 3 1 0 3 3 3 0 4Fe-4S binding domain FeS_assembly_P PF01883.19 gi|407464114|ref|YP_006774996.1| - 2.3e-16 59.7 0.2 3.2e-16 59.3 0.2 1.2 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein HMA PF00403.26 gi|407464114|ref|YP_006774996.1| - 0.067 13.6 1.5 0.38 11.2 0.1 2.2 2 0 0 2 2 2 0 Heavy-metal-associated domain Lyase_1 PF00206.20 gi|407464115|ref|YP_006774997.1| - 2e-52 178.5 0.1 3.9e-52 177.6 0.1 1.4 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|407464115|ref|YP_006774997.1| - 2e-12 47.7 0.0 2.5e-11 44.2 0.0 2.4 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal TRPM_tetra PF16519.5 gi|407464115|ref|YP_006774997.1| - 7.7 6.7 6.9 1.6 8.9 2.1 2.4 2 0 0 2 2 2 0 Tetramerisation domain of TRPM Tropomyosin_1 PF12718.7 gi|407464116|ref|YP_006774998.1| - 0.045 13.9 0.5 0.045 13.9 0.5 2.8 3 0 0 3 3 3 0 Tropomyosin like APG6_N PF17675.1 gi|407464116|ref|YP_006774998.1| - 0.28 11.7 0.2 0.28 11.7 0.2 3.6 2 1 0 2 2 2 0 Apg6 coiled-coil region Phosphodiest PF01663.22 gi|407464116|ref|YP_006774998.1| - 0.85 9.1 5.2 1.7 8.2 4.8 1.8 1 1 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase MRP-S27 PF10037.9 gi|407464116|ref|YP_006774998.1| - 2.2 7.1 20.8 2.4 6.9 15.5 2.0 2 0 0 2 2 2 0 Mitochondrial 28S ribosomal protein S27 GlutR_N PF05201.15 gi|407464117|ref|YP_006774999.1| - 1.5e-24 86.4 0.0 2.4e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.20 gi|407464117|ref|YP_006774999.1| - 2.8e-20 72.8 0.0 7.9e-20 71.3 0.0 1.8 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|407464117|ref|YP_006774999.1| - 0.00014 22.3 0.0 0.00031 21.2 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 gi|407464117|ref|YP_006774999.1| - 0.024 14.9 0.1 0.8 10.0 0.0 2.4 2 0 0 2 2 2 0 TrkA-N domain NAD_binding_7 PF13241.6 gi|407464117|ref|YP_006774999.1| - 0.094 13.2 0.0 0.22 12.0 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding HI0933_like PF03486.14 gi|407464117|ref|YP_006774999.1| - 0.15 10.8 0.1 0.42 9.3 0.1 1.8 1 1 2 3 3 3 0 HI0933-like protein DUF1059 PF06348.11 gi|407464118|ref|YP_006775000.1| - 3.1e-06 27.3 0.3 3.6e-06 27.1 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) NAD_binding_1 PF00175.21 gi|407464119|ref|YP_006775001.1| - 2.4e-11 44.3 0.0 5.5e-11 43.1 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|407464119|ref|YP_006775001.1| - 1.2e-08 35.1 0.0 2e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 gi|407464119|ref|YP_006775001.1| - 0.013 15.6 0.0 0.017 15.2 0.0 1.5 1 1 0 1 1 1 0 Ferric reductase NAD binding domain Methyltransf_34 PF11312.8 gi|407464119|ref|YP_006775001.1| - 0.014 14.7 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase Chitin_synth_1N PF08407.11 gi|407464119|ref|YP_006775001.1| - 0.15 12.0 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Chitin synthase N-terminal Inositol_P PF00459.25 gi|407464120|ref|YP_006775002.1| - 1.5e-27 96.8 0.0 1.6e-27 96.7 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|407464120|ref|YP_006775002.1| - 6.6e-05 22.5 0.1 0.00011 21.8 0.1 1.3 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain AAA PF00004.29 gi|407464122|ref|YP_006775004.1| - 1.4e-13 51.5 0.0 3e-13 50.3 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|407464122|ref|YP_006775004.1| - 1.1e-07 31.7 0.0 2.8e-07 30.4 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 gi|407464122|ref|YP_006775004.1| - 4.7e-06 26.7 0.1 2e-05 24.6 0.0 2.0 2 0 0 2 2 2 1 Rad17 P-loop domain TIP49 PF06068.13 gi|407464122|ref|YP_006775004.1| - 5.4e-06 25.9 0.0 2.1e-05 23.9 0.0 1.8 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_16 PF13191.6 gi|407464122|ref|YP_006775004.1| - 0.00015 22.2 0.0 0.00041 20.8 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|407464122|ref|YP_006775004.1| - 0.00043 20.3 0.0 0.001 19.1 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|407464122|ref|YP_006775004.1| - 0.0036 17.6 0.1 0.049 13.9 0.0 2.5 2 1 1 3 3 3 1 AAA domain NTPase_1 PF03266.15 gi|407464122|ref|YP_006775004.1| - 0.0038 17.2 0.0 0.0096 15.8 0.0 1.8 1 0 0 1 1 1 1 NTPase AAA_7 PF12775.7 gi|407464122|ref|YP_006775004.1| - 0.005 16.4 0.0 0.01 15.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_2 PF07724.14 gi|407464122|ref|YP_006775004.1| - 0.0061 16.7 0.0 0.011 15.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_18 PF13238.6 gi|407464122|ref|YP_006775004.1| - 0.0064 17.0 0.0 0.016 15.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|407464122|ref|YP_006775004.1| - 0.0072 15.7 0.1 0.019 14.4 0.0 1.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|407464122|ref|YP_006775004.1| - 0.0077 16.2 0.0 0.017 15.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|407464122|ref|YP_006775004.1| - 0.0082 16.3 0.0 0.014 15.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|407464122|ref|YP_006775004.1| - 0.023 15.1 0.0 0.052 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 gi|407464122|ref|YP_006775004.1| - 0.034 13.5 0.1 3 7.2 0.0 3.0 2 1 0 3 3 3 0 Bacterial TniB protein AAA_24 PF13479.6 gi|407464122|ref|YP_006775004.1| - 0.045 13.5 0.0 0.098 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|407464122|ref|YP_006775004.1| - 0.053 13.9 0.0 0.15 12.5 0.0 1.8 1 0 0 1 1 1 0 RNA helicase Sigma54_activ_2 PF14532.6 gi|407464122|ref|YP_006775004.1| - 0.061 13.4 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain ResIII PF04851.15 gi|407464122|ref|YP_006775004.1| - 0.071 13.1 0.0 0.18 11.8 0.0 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Zeta_toxin PF06414.12 gi|407464122|ref|YP_006775004.1| - 0.085 12.1 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin IstB_IS21 PF01695.17 gi|407464122|ref|YP_006775004.1| - 0.087 12.6 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_11 PF13086.6 gi|407464122|ref|YP_006775004.1| - 0.14 12.0 0.0 2.3 7.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|407464122|ref|YP_006775004.1| - 0.17 12.4 0.4 0.84 10.2 0.0 2.4 1 1 1 2 2 2 0 ABC transporter AAA_25 PF13481.6 gi|407464122|ref|YP_006775004.1| - 0.2 11.2 0.0 0.37 10.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain Carboxyl_trans PF01039.22 gi|407464124|ref|YP_006775006.1| - 2.3e-184 613.6 0.1 2.7e-184 613.4 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|407464124|ref|YP_006775006.1| - 1.2e-06 28.2 0.0 2.6e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 Malonate decarboxylase gamma subunit (MdcE) CPSase_L_D2 PF02786.17 gi|407464125|ref|YP_006775007.1| - 4.7e-69 232.1 0.0 7.5e-69 231.4 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|407464125|ref|YP_006775007.1| - 2.3e-46 156.9 0.1 4.1e-46 156.1 0.1 1.4 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|407464125|ref|YP_006775007.1| - 4e-34 117.0 0.0 1e-33 115.6 0.0 1.8 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp PF02222.22 gi|407464125|ref|YP_006775007.1| - 3.7e-11 42.9 0.0 7.7e-11 41.9 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|407464125|ref|YP_006775007.1| - 5.4e-07 29.4 0.1 1.4e-06 28.0 0.1 1.6 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.11 gi|407464125|ref|YP_006775007.1| - 8.8e-07 28.7 0.0 6.7e-06 25.8 0.0 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|407464125|ref|YP_006775007.1| - 1.1e-06 28.8 0.0 2.3e-06 27.7 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|407464125|ref|YP_006775007.1| - 2.1e-05 24.2 0.0 6.4e-05 22.6 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|407464125|ref|YP_006775007.1| - 0.0077 15.5 0.0 0.016 14.5 0.0 1.5 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp GARS_A PF01071.19 gi|407464125|ref|YP_006775007.1| - 0.058 13.2 0.2 0.14 11.9 0.0 1.7 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_Ter PF15632.6 gi|407464125|ref|YP_006775007.1| - 0.13 12.0 0.0 0.28 10.9 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon LpxI_N PF17930.1 gi|407464125|ref|YP_006775007.1| - 0.15 12.0 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 LpxI N-terminal domain Biotin_lipoyl PF00364.22 gi|407464126|ref|YP_006775008.1| - 1.7e-16 59.8 6.9 1.7e-16 59.8 6.9 1.6 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|407464126|ref|YP_006775008.1| - 2.7e-14 52.7 3.3 3.2e-09 36.5 0.1 2.7 2 1 1 3 3 3 2 Biotin-lipoyl like HlyD_D23 PF16576.5 gi|407464126|ref|YP_006775008.1| - 0.00013 21.3 1.2 0.094 11.9 0.0 2.4 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 gi|407464126|ref|YP_006775008.1| - 0.00041 21.0 0.9 1.3 9.8 0.0 2.6 2 1 1 3 3 3 2 HlyD family secretion protein RnfC_N PF13375.6 gi|407464126|ref|YP_006775008.1| - 0.0013 18.7 2.1 0.0027 17.6 2.1 1.6 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain QRPTase_N PF02749.16 gi|407464126|ref|YP_006775008.1| - 0.0018 18.3 0.5 0.078 13.0 0.0 2.3 1 1 1 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain DUF2118 PF09891.9 gi|407464126|ref|YP_006775008.1| - 0.0024 17.8 0.4 0.0056 16.6 0.4 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2118) Peptidase_M23 PF01551.22 gi|407464126|ref|YP_006775008.1| - 0.0069 16.6 2.1 0.32 11.2 0.1 2.9 2 1 1 3 3 3 1 Peptidase family M23 PASTA PF03793.19 gi|407464126|ref|YP_006775008.1| - 0.018 14.9 1.0 0.087 12.7 0.1 2.3 2 0 0 2 2 2 0 PASTA domain PYNP_C PF07831.13 gi|407464126|ref|YP_006775008.1| - 0.063 12.9 0.8 0.39 10.4 0.2 2.2 1 1 1 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain eIF-1a PF01176.19 gi|407464126|ref|YP_006775008.1| - 0.084 12.7 0.6 0.82 9.5 0.0 2.6 2 1 0 2 2 2 0 Translation initiation factor 1A / IF-1 ATP-synt_ab_Xtn PF16886.5 gi|407464126|ref|YP_006775008.1| - 0.11 12.4 1.6 0.14 12.0 0.8 1.6 2 0 0 2 2 2 0 ATPsynthase alpha/beta subunit N-term extension AhpC-TSA PF00578.21 gi|407464127|ref|YP_006775009.1| - 1.2e-31 109.2 0.0 1.4e-31 109.0 0.0 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|407464127|ref|YP_006775009.1| - 3.3e-20 72.3 0.0 3.8e-20 72.1 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 gi|407464127|ref|YP_006775009.1| - 0.019 15.1 0.0 0.12 12.5 0.0 1.9 2 0 0 2 2 2 0 AhpC/TSA antioxidant enzyme SCO1-SenC PF02630.14 gi|407464127|ref|YP_006775009.1| - 0.043 13.7 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 SCO1/SenC DUF899 PF05988.12 gi|407464127|ref|YP_006775009.1| - 0.087 12.3 0.0 0.093 12.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) Oxidored_q4 PF00507.19 gi|407464128|ref|YP_006775010.1| - 7.3e-19 67.8 0.6 9.5e-19 67.4 0.6 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MPS-4 PF17523.2 gi|407464128|ref|YP_006775010.1| - 0.095 12.8 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Oxidored_q6 PF01058.22 gi|407464129|ref|YP_006775011.1| - 5.1e-25 87.8 0.1 7.1e-25 87.3 0.1 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.19 gi|407464130|ref|YP_006775012.1| - 5.9e-33 114.1 0.0 7.5e-33 113.8 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Complex1_49kDa PF00346.19 gi|407464131|ref|YP_006775013.1| - 2.3e-74 249.9 0.0 2.9e-57 193.8 0.0 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NADHdh PF00146.21 gi|407464132|ref|YP_006775014.1| - 2.1e-94 316.2 24.0 2.1e-94 316.2 24.0 1.4 2 0 0 2 2 2 1 NADH dehydrogenase Fer4 PF00037.27 gi|407464133|ref|YP_006775015.1| - 7.8e-12 44.5 10.8 3.2e-09 36.2 2.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|407464133|ref|YP_006775015.1| - 3.8e-09 36.5 17.6 1.4e-05 25.1 11.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|407464133|ref|YP_006775015.1| - 9.1e-09 35.8 9.2 1.5e-08 35.1 9.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|407464133|ref|YP_006775015.1| - 2.8e-08 33.8 20.3 4.9e-06 26.6 10.7 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|407464133|ref|YP_006775015.1| - 2.2e-07 30.9 6.7 3.9e-07 30.1 6.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|407464133|ref|YP_006775015.1| - 1.9e-06 28.2 2.4 0.0043 17.5 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|407464133|ref|YP_006775015.1| - 9.7e-06 25.4 9.8 0.0016 18.4 1.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|407464133|ref|YP_006775015.1| - 2e-05 24.5 11.8 4.3e-05 23.4 1.7 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_4 PF12800.7 gi|407464133|ref|YP_006775015.1| - 8e-05 22.9 7.9 0.012 16.0 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|407464133|ref|YP_006775015.1| - 0.0011 19.8 9.9 0.0051 17.7 0.3 2.4 1 1 2 3 3 3 2 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|407464133|ref|YP_006775015.1| - 0.0017 19.1 4.8 0.25 12.1 0.3 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|407464133|ref|YP_006775015.1| - 0.0022 18.5 11.0 0.031 14.8 0.9 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|407464133|ref|YP_006775015.1| - 0.0036 17.8 4.1 0.21 12.2 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|407464133|ref|YP_006775015.1| - 0.011 16.6 4.1 0.011 16.6 4.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|407464133|ref|YP_006775015.1| - 0.11 12.7 9.0 0.14 12.3 1.1 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|407464133|ref|YP_006775015.1| - 2.7 8.9 11.3 0.7 10.8 0.9 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain Oxidored_q3 PF00499.20 gi|407464134|ref|YP_006775016.1| - 9.1e-24 83.8 10.4 9.1e-24 83.8 10.4 1.4 2 0 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF4040 PF13244.6 gi|407464134|ref|YP_006775016.1| - 0.0084 16.2 10.3 0.0084 16.2 10.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4040) Oxidored_q2 PF00420.24 gi|407464135|ref|YP_006775017.1| - 3.5e-22 78.0 6.1 4.6e-22 77.6 6.1 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VPDSG-CTERM PF18205.1 gi|407464135|ref|YP_006775017.1| - 1.2 9.0 5.1 2.6 7.9 0.1 2.8 3 0 0 3 3 3 0 VPDSG-CTERM motif PEP-CTERM PF07589.11 gi|407464135|ref|YP_006775017.1| - 1.6 8.9 4.0 12 6.2 0.1 2.6 2 1 0 2 2 2 0 PEP-CTERM motif Proton_antipo_M PF00361.20 gi|407464136|ref|YP_006775018.1| - 5.3e-62 209.7 23.9 5.3e-62 209.7 23.9 1.8 1 1 1 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|407464136|ref|YP_006775018.1| - 3.1e-05 24.0 0.3 0.0003 20.8 0.0 2.9 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Microcin PF03526.13 gi|407464136|ref|YP_006775018.1| - 0.022 14.6 0.0 0.07 12.9 0.0 1.9 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein Proton_antipo_M PF00361.20 gi|407464137|ref|YP_006775019.1| - 1.1e-59 202.1 35.6 6.3e-59 199.6 29.3 3.1 2 1 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|407464137|ref|YP_006775019.1| - 3e-13 49.6 1.3 3e-13 49.6 1.3 3.6 4 0 0 4 4 4 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_C PF01010.19 gi|407464137|ref|YP_006775019.1| - 0.015 14.9 0.3 0.041 13.5 0.2 1.7 1 1 1 2 2 2 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Oxidored_q2 PF00420.24 gi|407464137|ref|YP_006775019.1| - 0.11 12.1 7.9 0.08 12.6 0.5 4.1 3 1 0 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ApoL PF05461.11 gi|407464137|ref|YP_006775019.1| - 0.27 10.5 1.0 0.51 9.6 0.1 1.8 2 0 0 2 2 2 0 Apolipoprotein L Proton_antipo_M PF00361.20 gi|407464138|ref|YP_006775020.1| - 1.1e-67 228.3 26.0 1.1e-67 228.3 26.0 2.5 1 1 1 2 2 2 1 Proton-conducting membrane transporter polyprenyl_synt PF00348.17 gi|407464139|ref|YP_006775021.1| - 7.2e-48 162.9 0.1 9.6e-48 162.5 0.1 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Haem_oxygenas_2 PF14518.6 gi|407464140|ref|YP_006775022.1| - 7.2e-14 52.0 0.0 8.5e-14 51.7 0.0 1.1 1 0 0 1 1 1 1 Iron-containing redox enzyme TENA_THI-4 PF03070.16 gi|407464140|ref|YP_006775022.1| - 4.9e-13 49.4 0.3 5.7e-13 49.2 0.3 1.1 1 0 0 1 1 1 1 TENA/THI-4/PQQC family UvrB_inter PF17757.1 gi|407464141|ref|YP_006775023.1| - 0.073 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 UvrB interaction domain LXG PF04740.12 gi|407464143|ref|YP_006775025.1| - 0.006 16.3 3.1 0.0074 16.0 3.1 1.1 1 0 0 1 1 1 1 LXG domain of WXG superfamily DUF948 PF06103.11 gi|407464143|ref|YP_006775025.1| - 0.011 15.9 7.9 0.053 13.8 7.7 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Vps51 PF08700.11 gi|407464143|ref|YP_006775025.1| - 0.035 14.2 8.1 0.05 13.7 7.7 1.5 1 1 0 1 1 1 0 Vps51/Vps67 TMPIT PF07851.13 gi|407464143|ref|YP_006775025.1| - 0.041 13.1 13.4 0.048 12.9 13.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein REF PF05755.12 gi|407464143|ref|YP_006775025.1| - 0.34 10.7 12.8 0.41 10.4 12.8 1.0 1 0 0 1 1 1 0 Rubber elongation factor protein (REF) Alanine_zipper PF11839.8 gi|407464143|ref|YP_006775025.1| - 0.39 11.1 25.5 1.8 9.0 20.0 3.0 1 1 1 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein Prefoldin PF02996.17 gi|407464143|ref|YP_006775025.1| - 0.46 10.4 14.3 0.53 10.2 3.6 2.1 2 0 0 2 2 2 0 Prefoldin subunit OEP PF02321.18 gi|407464143|ref|YP_006775025.1| - 0.55 10.0 14.6 0.83 9.4 14.6 1.3 1 0 0 1 1 1 0 Outer membrane efflux protein Syntaxin-6_N PF09177.11 gi|407464143|ref|YP_006775025.1| - 0.59 10.7 13.2 0.32 11.6 7.8 1.8 1 1 1 2 2 2 0 Syntaxin 6, N-terminal TPR_MLP1_2 PF07926.12 gi|407464143|ref|YP_006775025.1| - 1.4 9.0 21.4 1.8 8.6 21.4 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF87 PF01935.17 gi|407464143|ref|YP_006775025.1| - 1.7 8.7 8.9 2 8.5 8.9 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain Prominin PF05478.11 gi|407464143|ref|YP_006775025.1| - 2 6.3 8.6 2.4 6.0 8.6 1.2 1 0 0 1 1 1 0 Prominin Fib_alpha PF08702.10 gi|407464143|ref|YP_006775025.1| - 2.3 8.4 11.3 7.8 6.7 11.3 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family KIP1 PF07765.12 gi|407464143|ref|YP_006775025.1| - 3.1 8.0 8.7 2.2 8.5 2.1 2.3 1 1 1 2 2 2 0 KIP1-like protein DUF2203 PF09969.9 gi|407464143|ref|YP_006775025.1| - 4.4 8.0 13.6 2.3 9.0 10.7 1.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) HAT_KAT11 PF08214.11 gi|407464143|ref|YP_006775025.1| - 5.3 6.2 12.4 5.9 6.1 12.4 1.1 1 0 0 1 1 1 0 Histone acetylation protein ISG65-75 PF11727.8 gi|407464143|ref|YP_006775025.1| - 5.8 6.1 28.4 0.54 9.5 11.8 2.0 1 1 1 2 2 2 0 Invariant surface glycoprotein Uso1_p115_C PF04871.13 gi|407464143|ref|YP_006775025.1| - 7 7.0 23.5 2 8.8 8.0 2.1 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Spc7 PF08317.11 gi|407464143|ref|YP_006775025.1| - 8.7 5.1 19.2 9.5 5.0 19.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein HisKA_3 PF07730.13 gi|407464143|ref|YP_006775025.1| - 9.1 6.9 8.8 6.5e+02 0.9 8.8 2.9 1 1 0 1 1 1 0 Histidine kinase V_ATPase_I PF01496.19 gi|407464143|ref|YP_006775025.1| - 9.7 4.0 12.0 11 3.8 12.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family zf-CDGSH PF09360.10 gi|407464144|ref|YP_006775026.1| - 2.9e-11 43.4 1.4 5.5e-11 42.5 1.4 1.4 1 1 0 1 1 1 1 Iron-binding zinc finger CDGSH type Ribosomal_L9_N PF01281.19 gi|407464145|ref|YP_006775027.1| - 0.13 11.8 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L9, N-terminal domain AsnC_trans_reg PF01037.21 gi|407464148|ref|YP_006775030.1| - 0.00053 19.9 0.0 0.00065 19.6 0.0 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain MS_channel PF00924.18 gi|407464150|ref|YP_006775032.1| - 2.9e-16 59.6 1.4 4.2e-16 59.1 1.4 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel EmrE PF13536.6 gi|407464150|ref|YP_006775032.1| - 0.084 12.4 3.9 0.11 12.1 3.9 1.1 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter Colicin_V PF02674.16 gi|407464150|ref|YP_006775032.1| - 0.78 9.7 9.7 2.1 8.3 0.8 2.2 1 1 1 2 2 2 0 Colicin V production protein Pribosyltran PF00156.27 gi|407464151|ref|YP_006775033.1| - 2.3e-14 53.2 1.2 3.4e-14 52.6 1.2 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|407464151|ref|YP_006775033.1| - 0.0003 20.3 0.0 0.00045 19.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase UPRTase PF14681.6 gi|407464151|ref|YP_006775033.1| - 0.0017 17.9 0.1 0.0022 17.5 0.1 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Asp PF00026.23 gi|407464151|ref|YP_006775033.1| - 0.043 13.2 0.2 0.066 12.6 0.2 1.2 1 0 0 1 1 1 0 Eukaryotic aspartyl protease Peptidase_M50 PF02163.22 gi|407464153|ref|YP_006775035.1| - 2.4e-12 46.7 14.2 2e-07 30.5 0.7 2.6 1 1 0 2 2 2 2 Peptidase family M50 DUF3698 PF12479.8 gi|407464153|ref|YP_006775035.1| - 0.017 15.6 0.2 0.049 14.2 0.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3698) Acetyltransf_1 PF00583.25 gi|407464154|ref|YP_006775036.1| - 7.6e-19 68.1 0.2 9.9e-19 67.7 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|407464154|ref|YP_006775036.1| - 1.9e-14 53.9 1.2 2.3e-14 53.5 0.5 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|407464154|ref|YP_006775036.1| - 4.8e-13 49.2 0.1 6.9e-13 48.6 0.1 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|407464154|ref|YP_006775036.1| - 1.5e-09 37.6 0.2 5.7e-09 35.8 0.1 1.8 1 1 1 2 2 2 1 FR47-like protein GNAT_acetyltran PF12746.7 gi|407464154|ref|YP_006775036.1| - 0.00036 20.2 0.0 0.00043 19.9 0.0 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_8 PF13523.6 gi|407464154|ref|YP_006775036.1| - 0.00043 20.0 0.0 0.0017 18.1 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|407464154|ref|YP_006775036.1| - 0.0014 19.3 0.0 0.0019 18.8 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF4821 PF16092.5 gi|407464154|ref|YP_006775036.1| - 0.0036 17.0 0.0 0.0049 16.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4821) Acetyltransf_9 PF13527.7 gi|407464154|ref|YP_006775036.1| - 0.006 16.7 0.0 0.013 15.6 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|407464154|ref|YP_006775036.1| - 0.016 15.3 0.3 0.039 14.1 0.3 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|407464154|ref|YP_006775036.1| - 0.032 14.4 0.0 0.067 13.3 0.0 1.6 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 gi|407464154|ref|YP_006775036.1| - 0.099 12.1 0.1 0.15 11.5 0.1 1.5 1 1 0 1 1 1 0 Putative acetyl-transferase Phage_holin_3_6 PF07332.11 gi|407464155|ref|YP_006775037.1| - 0.042 13.9 2.6 0.049 13.7 2.6 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Myc_target_1 PF15179.6 gi|407464155|ref|YP_006775037.1| - 0.22 11.4 0.5 0.24 11.3 0.5 1.1 1 0 0 1 1 1 0 Myc target protein 1 DUF2207 PF09972.9 gi|407464155|ref|YP_006775037.1| - 0.99 8.1 3.4 1.1 7.9 3.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Met_10 PF02475.16 gi|407464156|ref|YP_006775038.1| - 1.5e-59 201.1 0.2 1.9e-59 200.7 0.2 1.1 1 0 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 gi|407464156|ref|YP_006775038.1| - 0.00011 21.7 0.1 0.00017 21.1 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TRM PF02005.16 gi|407464156|ref|YP_006775038.1| - 0.0004 19.7 0.1 0.00052 19.3 0.1 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.10 gi|407464156|ref|YP_006775038.1| - 0.0028 17.3 0.0 0.0048 16.5 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 gi|407464156|ref|YP_006775038.1| - 0.0041 16.8 0.0 0.0077 15.9 0.0 1.4 2 0 0 2 2 2 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|407464156|ref|YP_006775038.1| - 0.0083 15.7 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|407464156|ref|YP_006775038.1| - 0.043 14.5 0.0 0.087 13.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain ABC_tran PF00005.27 gi|407464157|ref|YP_006775039.1| - 2.3e-39 135.0 0.5 1.6e-18 67.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter RLI PF04068.15 gi|407464157|ref|YP_006775039.1| - 4.3e-10 39.2 1.3 4.3e-10 39.2 1.3 1.8 2 0 0 2 2 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Fer4 PF00037.27 gi|407464157|ref|YP_006775039.1| - 6.7e-09 35.2 5.9 6.7e-09 35.2 5.9 2.6 3 0 0 3 3 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|407464157|ref|YP_006775039.1| - 8.3e-09 35.1 13.8 3.9e-07 29.9 5.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain SMC_N PF02463.19 gi|407464157|ref|YP_006775039.1| - 4.8e-08 32.7 7.6 0.0036 16.8 0.9 3.3 2 2 1 3 3 3 2 RecF/RecN/SMC N terminal domain Fer4_2 PF12797.7 gi|407464157|ref|YP_006775039.1| - 9.2e-07 28.6 1.8 9.2e-07 28.6 1.8 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|407464157|ref|YP_006775039.1| - 1.1e-05 25.5 12.1 3.4e-05 23.9 1.2 2.4 1 1 1 2 2 2 1 4Fe-4S dicluster domain RsgA_GTPase PF03193.16 gi|407464157|ref|YP_006775039.1| - 1.9e-05 24.7 0.1 0.024 14.5 0.0 3.4 3 0 0 3 3 3 1 RsgA GTPase Fer4_21 PF14697.6 gi|407464157|ref|YP_006775039.1| - 2.3e-05 24.4 13.3 3.8e-05 23.7 13.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|407464157|ref|YP_006775039.1| - 3.4e-05 24.4 10.8 6.7e-05 23.4 10.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain MMR_HSR1 PF01926.23 gi|407464157|ref|YP_006775039.1| - 0.0039 17.2 0.5 0.27 11.3 0.4 2.8 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_16 PF13191.6 gi|407464157|ref|YP_006775039.1| - 0.0062 16.9 0.0 0.26 11.7 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|407464157|ref|YP_006775039.1| - 0.0072 16.0 0.4 0.56 10.0 0.1 2.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|407464157|ref|YP_006775039.1| - 0.0085 15.9 7.1 4.3 7.1 0.6 4.4 3 2 1 5 5 5 1 AAA domain, putative AbiEii toxin, Type IV TA system Fer4_16 PF13484.6 gi|407464157|ref|YP_006775039.1| - 0.0094 16.9 11.2 0.0095 16.9 1.4 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain NB-ARC PF00931.22 gi|407464157|ref|YP_006775039.1| - 0.014 14.6 0.2 2.4 7.3 0.1 2.5 2 1 0 2 2 2 0 NB-ARC domain SbcCD_C PF13558.6 gi|407464157|ref|YP_006775039.1| - 0.015 15.5 0.2 11 6.3 0.0 2.8 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit RE_XcyI PF09571.10 gi|407464157|ref|YP_006775039.1| - 0.018 14.3 0.1 0.046 13.0 0.1 1.6 2 0 0 2 2 2 0 XcyI restriction endonuclease Fer4_4 PF12800.7 gi|407464157|ref|YP_006775039.1| - 0.024 15.1 1.6 0.024 15.1 1.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_14 PF13173.6 gi|407464157|ref|YP_006775039.1| - 0.025 14.6 0.1 3.5 7.7 0.0 3.5 3 0 0 3 3 3 0 AAA domain Fer4_3 PF12798.7 gi|407464157|ref|YP_006775039.1| - 0.031 15.2 4.9 0.031 15.2 4.9 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Rad17 PF03215.15 gi|407464157|ref|YP_006775039.1| - 0.033 14.1 0.0 0.29 11.1 0.0 2.2 2 0 0 2 2 2 0 Rad17 P-loop domain Fer4_9 PF13187.6 gi|407464157|ref|YP_006775039.1| - 0.047 13.9 13.4 0.094 12.9 13.4 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain AAA PF00004.29 gi|407464157|ref|YP_006775039.1| - 0.077 13.4 0.1 2.8 8.4 0.0 2.7 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|407464157|ref|YP_006775039.1| - 0.11 12.3 0.3 13 5.4 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_15 PF13175.6 gi|407464157|ref|YP_006775039.1| - 0.16 11.7 5.7 5.3 6.6 0.1 3.2 2 2 1 3 3 3 0 AAA ATPase domain AAA_23 PF13476.6 gi|407464157|ref|YP_006775039.1| - 0.9 10.0 6.4 14 6.1 0.0 3.5 2 1 1 3 3 3 0 AAA domain Fer4_17 PF13534.6 gi|407464157|ref|YP_006775039.1| - 1.2 9.7 8.8 0.21 12.1 1.1 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|407464157|ref|YP_006775039.1| - 6.6 7.3 9.5 0.56 10.7 1.3 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Peptidase_M17 PF00883.21 gi|407464158|ref|YP_006775040.1| - 7.7e-121 403.2 0.0 1.1e-120 402.7 0.0 1.2 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 gi|407464158|ref|YP_006775040.1| - 2.9e-19 69.2 0.0 9.4e-19 67.5 0.0 1.9 1 0 0 1 1 1 1 Cytosol aminopeptidase family, N-terminal domain DUF393 PF04134.12 gi|407464159|ref|YP_006775041.1| - 0.0041 18.4 0.0 0.0058 18.0 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function, DUF393 CxxCxxCC PF03692.15 gi|407464160|ref|YP_006775042.1| - 3.4e-09 37.3 0.2 8.7e-09 35.9 0.1 1.7 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain Ribul_P_3_epim PF00834.19 gi|407464161|ref|YP_006775043.1| - 2.6e-51 173.8 0.1 4e-51 173.2 0.1 1.3 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Transketolase_N PF00456.21 gi|407464161|ref|YP_006775043.1| - 8.7e-40 136.7 0.2 2.1e-38 132.1 0.2 2.2 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 gi|407464161|ref|YP_006775043.1| - 1.8e-05 24.1 0.1 0.00013 21.3 0.1 1.9 1 1 1 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 gi|407464161|ref|YP_006775043.1| - 4e-05 22.7 0.0 6.4e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|407464161|ref|YP_006775043.1| - 0.00012 21.9 0.0 0.00033 20.5 0.0 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFP_N PF09364.10 gi|407464161|ref|YP_006775043.1| - 0.0021 17.0 1.4 0.0053 15.6 0.1 2.2 3 0 0 3 3 3 1 XFP N-terminal domain Transketolase_C PF02780.20 gi|407464162|ref|YP_006775044.1| - 5.9e-33 113.4 0.0 1.1e-32 112.6 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transket_pyr PF02779.24 gi|407464162|ref|YP_006775044.1| - 1e-29 103.5 0.0 1.5e-29 102.9 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain PFOR_II PF17147.4 gi|407464162|ref|YP_006775044.1| - 0.00052 20.3 0.0 0.001 19.3 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TAL_FSA PF00923.19 gi|407464163|ref|YP_006775045.1| - 1.6e-61 208.2 0.0 5.3e-61 206.5 0.0 1.7 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase CorA PF01544.18 gi|407464165|ref|YP_006775047.1| - 2e-72 244.0 1.4 2.4e-72 243.7 1.4 1.1 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Focal_AT PF03623.13 gi|407464165|ref|YP_006775047.1| - 0.01 15.8 0.3 0.032 14.2 0.3 1.9 1 1 0 1 1 1 0 Focal adhesion targeting region DUF5082 PF16888.5 gi|407464165|ref|YP_006775047.1| - 0.06 13.6 3.4 11 6.4 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF5082) DUF2397 PF09660.10 gi|407464165|ref|YP_006775047.1| - 0.21 10.5 0.1 0.32 9.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2397) DUF1664 PF07889.12 gi|407464165|ref|YP_006775047.1| - 0.24 11.5 1.8 1.5 8.8 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) T3SchapCesA PF11439.8 gi|407464165|ref|YP_006775047.1| - 0.35 11.0 4.0 5.5 7.2 0.0 3.1 2 1 0 3 3 3 0 Type III secretion system filament chaperone CesA DOT1 PF08123.13 gi|407464167|ref|YP_006775049.1| - 0.0022 17.6 0.6 0.15 11.6 0.6 2.4 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_31 PF13847.6 gi|407464167|ref|YP_006775049.1| - 0.0046 16.8 0.1 0.0059 16.4 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain CUB PF00431.20 gi|407464167|ref|YP_006775049.1| - 0.0056 17.0 0.4 0.24 11.8 0.0 2.2 2 0 0 2 2 2 1 CUB domain Methyltransf_25 PF13649.6 gi|407464167|ref|YP_006775049.1| - 0.024 15.3 0.0 0.048 14.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain UPF0147 PF03685.13 gi|407464168|ref|YP_006775050.1| - 1e-30 105.6 1.3 1.2e-30 105.4 1.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) Ribosomal_L5 PF00281.19 gi|407464168|ref|YP_006775050.1| - 0.026 14.8 1.0 0.042 14.2 0.6 1.5 2 0 0 2 2 2 0 Ribosomal protein L5 DUF5021 PF16424.5 gi|407464168|ref|YP_006775050.1| - 0.029 14.2 0.1 0.043 13.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5021) UvrB PF12344.8 gi|407464168|ref|YP_006775050.1| - 0.055 13.3 2.5 3.2 7.7 0.3 2.3 2 0 0 2 2 2 0 Ultra-violet resistance protein B UPF0253 PF06786.12 gi|407464168|ref|YP_006775050.1| - 0.073 13.3 0.1 16 5.8 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) O_anti_polymase PF01901.16 gi|407464168|ref|YP_006775050.1| - 0.16 11.2 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative O-antigen polymerase Rieske PF00355.26 gi|407464169|ref|YP_006775051.1| - 1.7e-18 66.3 0.1 2.2e-18 66.0 0.1 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|407464169|ref|YP_006775051.1| - 3.6e-08 33.3 0.0 4.2e-08 33.1 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain DUF3238 PF11579.8 gi|407464169|ref|YP_006775051.1| - 0.067 13.0 0.0 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3238) Acetyltransf_1 PF00583.25 gi|407464170|ref|YP_006775052.1| - 2.5e-08 34.2 0.0 4.7e-08 33.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|407464170|ref|YP_006775052.1| - 4.5e-05 23.8 0.0 8.1e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|407464170|ref|YP_006775052.1| - 0.00073 19.5 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Gly_acyl_tr_C PF08444.10 gi|407464170|ref|YP_006775052.1| - 0.032 14.4 0.1 0.032 14.4 0.1 2.2 3 0 0 3 3 3 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region Acetyltransf_CG PF14542.6 gi|407464170|ref|YP_006775052.1| - 0.044 13.9 0.0 0.082 13.0 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase FAA_hydrolase PF01557.18 gi|407464171|ref|YP_006775053.1| - 7.3e-69 231.8 0.0 9e-69 231.5 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.9 gi|407464171|ref|YP_006775053.1| - 0.0027 18.6 0.0 0.011 16.7 0.0 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF2437) tRNA-synt_1c PF00749.21 gi|407464172|ref|YP_006775054.1| - 7.6e-81 271.4 0.0 1.1e-80 270.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|407464172|ref|YP_006775054.1| - 3e-23 82.6 1.1 5.3e-23 81.8 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain polyprenyl_synt PF00348.17 gi|407464173|ref|YP_006775055.1| - 4.9e-70 235.5 0.0 6e-70 235.2 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Terpene_synth_C PF03936.16 gi|407464173|ref|YP_006775055.1| - 0.012 14.9 0.0 0.023 14.1 0.0 1.4 1 0 0 1 1 1 0 Terpene synthase family, metal binding domain NUDIX PF00293.28 gi|407464174|ref|YP_006775056.1| - 1.8e-13 50.6 0.1 2.7e-13 50.1 0.1 1.3 1 0 0 1 1 1 1 NUDIX domain AA_kinase PF00696.28 gi|407464175|ref|YP_006775057.1| - 1e-30 107.1 0.0 1.2e-30 106.9 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family GHMP_kinases_N PF00288.26 gi|407464176|ref|YP_006775058.1| - 3.5e-18 65.6 0.1 9.6e-18 64.2 0.1 1.8 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|407464176|ref|YP_006775058.1| - 7.6e-14 51.8 0.0 1.8e-13 50.7 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal Tubulin_C PF03953.17 gi|407464176|ref|YP_006775058.1| - 0.0092 16.1 0.2 0.39 10.9 0.0 2.7 3 0 0 3 3 3 1 Tubulin C-terminal domain GalKase_gal_bdg PF10509.9 gi|407464176|ref|YP_006775058.1| - 0.0097 15.4 0.0 0.018 14.6 0.0 1.4 1 0 0 1 1 1 1 Galactokinase galactose-binding signature I_LWEQ PF01608.17 gi|407464176|ref|YP_006775058.1| - 0.072 13.3 0.7 0.15 12.3 0.7 1.5 1 0 0 1 1 1 0 I/LWEQ domain Lsm_C PF14894.6 gi|407464176|ref|YP_006775058.1| - 0.15 11.9 0.7 0.53 10.1 0.2 2.2 2 0 0 2 2 2 0 Lsm C-terminal DUF3800 PF12686.7 gi|407464176|ref|YP_006775058.1| - 0.55 10.9 4.3 12 6.6 4.1 2.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3800) Ribosomal_S2 PF00318.20 gi|407464177|ref|YP_006775059.1| - 8.1e-22 77.5 0.2 6e-11 42.0 0.7 2.1 2 0 0 2 2 2 2 Ribosomal protein S2 AP_endonuc_2 PF01261.24 gi|407464177|ref|YP_006775059.1| - 0.015 14.7 0.0 0.022 14.2 0.0 1.2 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Enolase_C PF00113.22 gi|407464178|ref|YP_006775060.1| - 1.9e-57 194.7 0.1 2.6e-57 194.3 0.1 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|407464178|ref|YP_006775060.1| - 1.2e-20 74.0 0.0 2.9e-20 72.8 0.0 1.7 1 0 0 1 1 1 1 Enolase, N-terminal domain DUF155 PF02582.14 gi|407464178|ref|YP_006775060.1| - 0.086 12.9 0.0 0.23 11.5 0.0 1.7 1 0 0 1 1 1 0 Uncharacterised ACR, YagE family COG1723 RNA_pol_N PF01194.17 gi|407464179|ref|YP_006775061.1| - 4.5e-27 94.1 0.5 6e-27 93.7 0.5 1.2 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.12 gi|407464179|ref|YP_006775061.1| - 0.071 13.4 1.3 0.19 12.0 1.3 1.7 1 1 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Translin PF01997.16 gi|407464180|ref|YP_006775062.1| - 4.3e-10 39.9 2.3 5.7e-08 33.0 2.3 2.3 1 1 0 1 1 1 1 Translin family Ribonuc_red_lgN PF00317.21 gi|407464180|ref|YP_006775062.1| - 0.14 12.1 0.1 0.27 11.3 0.1 1.4 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain YjeF_N PF03853.15 gi|407464181|ref|YP_006775063.1| - 4.7e-47 160.1 0.0 5.4e-47 159.8 0.0 1.0 1 0 0 1 1 1 1 YjeF-related protein N-terminus Lactamase_B PF00753.27 gi|407464182|ref|YP_006775064.1| - 7.1e-22 78.4 0.5 7.4e-20 71.8 0.5 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|407464182|ref|YP_006775064.1| - 8e-06 25.5 0.1 1.1e-05 25.0 0.1 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|407464182|ref|YP_006775064.1| - 0.082 12.8 0.6 0.11 12.4 0.6 1.4 1 1 0 1 1 1 0 Beta-lactamase superfamily domain DBI_PRT PF02277.17 gi|407464183|ref|YP_006775065.1| - 1.4e-11 44.2 0.2 2e-11 43.7 0.2 1.2 1 0 0 1 1 1 1 Phosphoribosyltransferase DUF780 PF05611.11 gi|407464183|ref|YP_006775065.1| - 0.43 11.4 2.7 8.2 7.3 0.4 2.3 2 0 0 2 2 2 0 Caenorhabditis elegans protein of unknown function (DUF780) SIS PF01380.22 gi|407464184|ref|YP_006775066.1| - 6.4e-46 155.4 2.5 3.1e-24 85.3 1.2 2.4 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|407464184|ref|YP_006775066.1| - 4e-21 75.6 0.0 6.7e-21 74.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|407464184|ref|YP_006775066.1| - 8e-17 61.3 0.0 1.6e-16 60.4 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain SIS_2 PF13580.6 gi|407464184|ref|YP_006775066.1| - 7.7e-07 29.2 1.7 0.0036 17.3 0.4 3.4 2 1 1 3 3 3 2 SIS domain GATase_4 PF13230.6 gi|407464184|ref|YP_006775066.1| - 1.4e-06 27.4 0.1 2.3e-06 26.7 0.1 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Asparaginase_2 PF01112.18 gi|407464184|ref|YP_006775066.1| - 0.012 14.7 0.1 6.8 5.6 0.0 2.8 2 1 1 3 3 3 0 Asparaginase Succ_DH_flav_C PF02910.20 gi|407464184|ref|YP_006775066.1| - 0.022 14.8 0.1 0.14 12.1 0.0 2.5 3 0 0 3 3 3 0 Fumarate reductase flavoprotein C-term Med28 PF11594.8 gi|407464184|ref|YP_006775066.1| - 0.1 12.7 0.6 0.32 11.1 0.2 1.9 2 0 0 2 2 2 0 Mediator complex subunit 28 YtxH PF12732.7 gi|407464184|ref|YP_006775066.1| - 1.1 9.8 5.0 2.2 8.9 0.6 2.7 3 0 0 3 3 3 0 YtxH-like protein S4 PF01479.25 gi|407464185|ref|YP_006775067.1| - 1.2e-10 41.0 0.1 6.6e-10 38.6 0.0 2.2 2 0 0 2 2 2 1 S4 domain Ribosomal_S13 PF00416.22 gi|407464186|ref|YP_006775068.1| - 1.8e-38 131.8 0.1 2.1e-38 131.6 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 HHH_6 PF14579.6 gi|407464186|ref|YP_006775068.1| - 0.041 14.1 0.0 0.063 13.5 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif HTH_20 PF12840.7 gi|407464187|ref|YP_006775069.1| - 0.00049 20.1 0.0 0.00066 19.7 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|407464187|ref|YP_006775069.1| - 0.0075 16.1 0.1 0.012 15.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF4423 PF14394.6 gi|407464187|ref|YP_006775069.1| - 0.018 14.8 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_AsnC-type PF13404.6 gi|407464187|ref|YP_006775069.1| - 0.029 14.2 0.0 0.045 13.6 0.0 1.4 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_9 PF08221.11 gi|407464187|ref|YP_006775069.1| - 0.045 13.8 0.0 0.084 13.0 0.0 1.5 1 1 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF4196 PF13846.6 gi|407464187|ref|YP_006775069.1| - 0.081 13.1 1.3 0.11 12.8 1.3 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4196) MarR_2 PF12802.7 gi|407464187|ref|YP_006775069.1| - 0.17 11.8 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 MarR family Gram_pos_anchor PF00746.21 gi|407464188|ref|YP_006775070.1| - 0.0051 16.7 5.4 0.036 14.0 0.4 2.4 2 0 0 2 2 2 2 LPXTG cell wall anchor motif EMP24_GP25L PF01105.24 gi|407464188|ref|YP_006775070.1| - 0.031 14.2 0.3 0.063 13.2 0.1 1.5 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Cu-oxidase_3 PF07732.15 gi|407464189|ref|YP_006775071.1| - 2.1e-22 79.3 5.4 4.7e-19 68.6 0.6 2.2 2 0 0 2 2 2 2 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|407464189|ref|YP_006775071.1| - 7.1e-19 67.9 7.7 6.8e-09 35.6 0.4 3.2 3 0 0 3 3 3 3 Multicopper oxidase ZirS_C PF16583.5 gi|407464189|ref|YP_006775071.1| - 0.13 11.8 0.2 0.36 10.4 0.1 1.7 2 0 0 2 2 2 0 Zinc-regulated secreted antivirulence protein C-terminal domain Zip PF02535.22 gi|407464190|ref|YP_006775072.1| - 9.2e-05 21.8 16.4 9.2e-05 21.8 16.4 2.4 1 1 1 2 2 2 2 ZIP Zinc transporter Internalin_N PF12354.8 gi|407464190|ref|YP_006775072.1| - 0.028 14.5 0.5 0.13 12.3 0.0 2.4 2 0 0 2 2 2 0 Bacterial adhesion/invasion protein N terminal PIRT PF15099.6 gi|407464190|ref|YP_006775072.1| - 0.27 10.8 0.1 0.27 10.8 0.1 2.8 3 0 0 3 3 3 0 Phosphoinositide-interacting protein family DUF2070 PF09843.9 gi|407464190|ref|YP_006775072.1| - 7.4 4.7 17.2 8.3 4.6 14.1 2.1 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) ZT_dimer PF16916.5 gi|407464191|ref|YP_006775073.1| - 5e-49 164.3 15.3 1.8e-18 66.4 2.6 3.2 3 0 0 3 3 3 3 Dimerisation domain of Zinc Transporter Cation_efflux PF01545.21 gi|407464191|ref|YP_006775073.1| - 2.1e-43 148.4 16.9 2.6e-43 148.1 16.9 1.1 1 0 0 1 1 1 1 Cation efflux family Lipid_DES PF08557.10 gi|407464191|ref|YP_006775073.1| - 0.024 14.1 0.8 0.05 13.1 0.8 1.5 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) Deltameth_res PF16020.5 gi|407464191|ref|YP_006775073.1| - 0.027 14.3 1.9 1.3 8.9 0.1 2.7 2 0 0 2 2 2 0 Deltamethrin resistance Fe_dep_repr_C PF02742.15 gi|407464191|ref|YP_006775073.1| - 0.064 13.3 1.9 5.3 7.2 0.1 3.7 4 0 0 4 4 4 0 Iron dependent repressor, metal binding and dimerisation domain LBP_M PF17385.2 gi|407464191|ref|YP_006775073.1| - 0.13 11.8 0.1 0.22 11.0 0.1 1.3 1 0 0 1 1 1 0 Lacto-N-biose phosphorylase central domain Pkr1 PF08636.10 gi|407464191|ref|YP_006775073.1| - 0.13 12.4 2.0 0.43 10.8 2.0 1.9 1 0 0 1 1 1 0 ER protein Pkr1 BON PF04972.17 gi|407464191|ref|YP_006775073.1| - 0.2 12.0 2.4 0.59 10.5 0.1 2.9 3 0 0 3 3 3 0 BON domain DUF1206 PF06724.11 gi|407464191|ref|YP_006775073.1| - 2 8.6 8.1 0.23 11.6 2.0 2.5 2 1 0 2 2 2 0 Domain of Unknown Function (DUF1206) MG2 PF01835.19 gi|407464192|ref|YP_006775074.1| - 0.0014 19.1 0.0 0.0088 16.5 0.0 2.4 2 0 0 2 2 2 1 MG2 domain MelC1 PF06236.11 gi|407464192|ref|YP_006775074.1| - 0.18 11.9 0.0 0.39 10.8 0.0 1.5 1 0 0 1 1 1 0 Tyrosinase co-factor MelC1 Trypan_PARP PF05887.11 gi|407464193|ref|YP_006775075.1| - 6.4e-11 42.4 11.3 6.4e-11 42.4 11.3 1.7 2 0 0 2 2 2 1 Procyclic acidic repetitive protein (PARP) TonB_N PF16031.5 gi|407464193|ref|YP_006775075.1| - 0.0061 17.1 22.6 0.01 16.4 22.6 1.3 1 0 0 1 1 1 1 TonB polyproline region DUF2868 PF11067.8 gi|407464193|ref|YP_006775075.1| - 0.22 11.0 0.1 0.28 10.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) Radical_SAM PF04055.21 gi|407464195|ref|YP_006775077.1| - 7e-13 49.3 0.0 1.3e-12 48.4 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 gi|407464195|ref|YP_006775077.1| - 0.069 13.2 0.0 0.15 12.1 0.0 1.7 1 0 0 1 1 1 0 B12 binding domain AIRC PF00731.20 gi|407464196|ref|YP_006775078.1| - 8.4e-15 54.6 3.0 1.4e-14 53.9 3.0 1.3 1 0 0 1 1 1 1 AIR carboxylase NAD_kinase PF01513.21 gi|407464196|ref|YP_006775078.1| - 0.0016 17.7 0.2 0.0028 16.9 0.2 1.5 1 1 0 1 1 1 1 ATP-NAD kinase PrpR_N PF06506.11 gi|407464196|ref|YP_006775078.1| - 0.062 12.9 0.5 0.23 11.0 0.1 2.0 2 0 0 2 2 2 0 Propionate catabolism activator HTH_ParB PF17762.1 gi|407464196|ref|YP_006775078.1| - 0.15 11.9 0.1 0.43 10.4 0.0 1.8 2 0 0 2 2 2 0 HTH domain found in ParB protein Ldh_1_N PF00056.23 gi|407464197|ref|YP_006775079.1| - 1.3e-36 125.8 0.5 2.4e-36 124.9 0.5 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|407464197|ref|YP_006775079.1| - 1.2e-28 100.1 0.1 2e-28 99.4 0.1 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain DUF111 PF01969.17 gi|407464198|ref|YP_006775080.1| - 6.5e-102 341.4 0.1 7.6e-102 341.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 QueC PF06508.13 gi|407464199|ref|YP_006775081.1| - 1.2e-08 34.7 0.4 2.6e-07 30.3 0.1 2.4 1 1 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|407464199|ref|YP_006775081.1| - 7.8e-07 28.2 0.2 4.5e-05 22.4 0.1 2.3 2 0 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.21 gi|407464199|ref|YP_006775081.1| - 1.1e-06 28.6 0.0 1.9e-06 27.8 0.0 1.5 2 0 0 2 2 2 1 Asparagine synthase NAD_synthase PF02540.17 gi|407464199|ref|YP_006775081.1| - 1.2e-06 27.8 0.0 2.3e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 NAD synthase ATP_bind_3 PF01171.20 gi|407464199|ref|YP_006775081.1| - 2.7e-06 27.3 0.1 1.7e-05 24.7 0.2 2.1 2 1 0 2 2 2 1 PP-loop family ThiI PF02568.14 gi|407464199|ref|YP_006775081.1| - 1.3e-05 24.8 0.1 4.1e-05 23.2 0.1 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Aminotran_5 PF00266.19 gi|407464200|ref|YP_006775082.1| - 5.7e-83 278.9 0.4 6.7e-83 278.7 0.4 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|407464200|ref|YP_006775082.1| - 8.8e-05 21.9 0.0 0.00014 21.3 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|407464200|ref|YP_006775082.1| - 0.00015 21.2 0.1 0.00026 20.4 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|407464200|ref|YP_006775082.1| - 0.00052 18.6 0.0 0.00087 17.9 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Pyridoxal_deC PF00282.19 gi|407464200|ref|YP_006775082.1| - 0.086 11.5 0.0 0.15 10.8 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain CarboxypepD_reg PF13620.6 gi|407464201|ref|YP_006775083.1| - 0.039 14.2 0.3 0.11 12.8 0.3 1.8 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain GP40 PF11025.8 gi|407464202|ref|YP_006775084.1| - 0.055 13.2 0.3 0.13 12.0 0.2 1.7 1 1 0 1 1 1 0 Glycoprotein GP40 of Cryptosporidium Big_3_5 PF16640.5 gi|407464202|ref|YP_006775084.1| - 0.55 10.4 5.4 3 8.1 1.4 2.4 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 3) DUF4369 PF14289.6 gi|407464202|ref|YP_006775084.1| - 0.56 10.7 3.9 3.3 8.3 0.5 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4369) DUF4361 PF14274.6 gi|407464202|ref|YP_006775084.1| - 1 9.6 4.6 0.88 9.8 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4361) P_proprotein PF01483.20 gi|407464203|ref|YP_006775085.1| - 0.0034 17.4 0.0 0.17 11.9 0.0 2.4 2 0 0 2 2 2 1 Proprotein convertase P-domain Flagellin_D3 PF08884.11 gi|407464203|ref|YP_006775085.1| - 0.11 12.9 9.1 0.91 10.0 2.8 3.8 2 1 1 3 3 3 0 Flagellin D3 domain FixH PF05751.11 gi|407464203|ref|YP_006775085.1| - 0.31 11.0 1.9 0.94 9.5 0.0 2.5 3 0 0 3 3 3 0 FixH Trp_ring PF18669.1 gi|407464203|ref|YP_006775085.1| - 0.74 10.0 10.0 3 8.1 3.0 3.4 3 0 0 3 3 3 0 Trimeric autotransporter adhesin Trp ring domain Cadherin-like PF12733.7 gi|407464203|ref|YP_006775085.1| - 1.4 9.5 9.3 0.23 12.0 1.0 3.0 3 1 0 3 3 3 0 Cadherin-like beta sandwich domain DUF4493 PF14900.6 gi|407464204|ref|YP_006775086.1| - 1 9.2 9.1 0.53 10.1 5.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4493) RNA_pol_Rpb5_C PF01191.19 gi|407464205|ref|YP_006775087.1| - 3e-27 94.3 0.1 3.5e-27 94.1 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb2_6 PF00562.28 gi|407464206|ref|YP_006775088.1| - 2.2e-124 415.5 0.0 3.2e-124 414.9 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 gi|407464206|ref|YP_006775088.1| - 4.9e-48 163.4 0.0 7.2e-48 162.8 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_7 PF04560.20 gi|407464206|ref|YP_006775088.1| - 3.5e-32 110.7 0.1 7.5e-32 109.6 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_3 PF04565.16 gi|407464206|ref|YP_006775088.1| - 1.2e-27 95.8 0.1 2.9e-27 94.6 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_2 PF04561.14 gi|407464206|ref|YP_006775088.1| - 1e-24 87.2 0.0 2.3e-24 86.1 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_4 PF04566.13 gi|407464206|ref|YP_006775088.1| - 3.1e-19 69.0 0.2 7.2e-19 67.8 0.2 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|407464206|ref|YP_006775088.1| - 3.7e-08 33.8 0.0 9.4e-08 32.5 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 FYVE_2 PF02318.16 gi|407464206|ref|YP_006775088.1| - 0.1 12.8 0.1 0.19 12.0 0.1 1.4 1 0 0 1 1 1 0 FYVE-type zinc finger OrfB_Zn_ribbon PF07282.11 gi|407464206|ref|YP_006775088.1| - 0.2 11.6 1.5 0.59 10.1 1.5 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Ribosomal_L37e PF01907.19 gi|407464206|ref|YP_006775088.1| - 0.37 11.0 0.9 0.83 9.9 0.9 1.5 1 0 0 1 1 1 0 Ribosomal protein L37e RecR PF02132.15 gi|407464206|ref|YP_006775088.1| - 0.42 10.2 1.7 1.9 8.1 0.6 2.2 2 0 0 2 2 2 0 RecR protein RNA_pol_Rpb1_1 PF04997.12 gi|407464207|ref|YP_006775089.1| - 1.9e-93 313.2 0.0 1.3e-92 310.5 0.0 2.0 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_5 PF04998.17 gi|407464207|ref|YP_006775089.1| - 7.4e-82 274.8 2.0 7.4e-82 274.8 2.0 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 gi|407464207|ref|YP_006775089.1| - 9e-73 244.0 0.0 1.5e-72 243.2 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|407464207|ref|YP_006775089.1| - 1.1e-34 119.6 0.2 4.5e-34 117.7 0.0 2.2 3 0 0 3 3 3 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|407464207|ref|YP_006775089.1| - 4.2e-24 84.6 0.3 1.2e-22 79.9 0.2 2.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 DivIVA PF05103.13 gi|407464207|ref|YP_006775089.1| - 0.043 13.9 0.7 2.9 8.0 0.1 2.7 2 0 0 2 2 2 0 DivIVA protein LSM PF01423.22 gi|407464208|ref|YP_006775090.1| - 1.5e-18 66.2 0.8 1.7e-18 66.1 0.8 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|407464208|ref|YP_006775090.1| - 0.0019 18.3 0.0 0.002 18.2 0.0 1.1 1 0 0 1 1 1 1 Ataxin 2 SM domain TPR_1 PF00515.28 gi|407464210|ref|YP_006775092.1| - 4.7e-16 57.8 1.8 1.1e-05 25.0 1.9 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407464210|ref|YP_006775092.1| - 3.1e-15 55.0 0.2 0.00015 21.6 0.5 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407464210|ref|YP_006775092.1| - 7.9e-11 41.3 0.1 3.6e-05 23.6 0.0 2.8 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|407464210|ref|YP_006775092.1| - 2.1e-08 33.7 1.4 0.0053 16.4 0.9 3.5 1 1 2 3 3 3 3 TPR repeat TPR_17 PF13431.6 gi|407464210|ref|YP_006775092.1| - 4.6e-08 32.9 4.1 0.00011 22.4 0.2 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407464210|ref|YP_006775092.1| - 1.8e-07 31.6 0.1 1.6e-06 28.5 0.3 2.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407464210|ref|YP_006775092.1| - 1.5e-06 28.4 0.0 0.43 10.9 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407464210|ref|YP_006775092.1| - 4e-06 27.2 0.0 0.017 15.9 0.0 3.3 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|407464210|ref|YP_006775092.1| - 0.00013 21.8 0.0 0.45 10.7 0.0 2.8 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|407464210|ref|YP_006775092.1| - 0.0023 18.5 0.0 0.77 10.5 0.2 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 gi|407464210|ref|YP_006775092.1| - 0.0058 16.5 0.2 1.1 9.3 0.9 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF966 PF06136.13 gi|407464210|ref|YP_006775092.1| - 5.8 6.5 18.8 8.9 5.9 18.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Ribosomal_L7Ae PF01248.26 gi|407464211|ref|YP_006775093.1| - 1e-12 47.6 0.2 1.2e-12 47.3 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Methyltransf_5 PF01795.19 gi|407464211|ref|YP_006775093.1| - 0.07 12.6 1.2 0.64 9.5 0.1 2.0 1 1 0 2 2 2 0 MraW methylase family KH_2 PF07650.17 gi|407464212|ref|YP_006775094.1| - 5.1e-20 71.1 2.2 5e-12 45.5 0.2 2.1 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 gi|407464212|ref|YP_006775094.1| - 1e-10 41.3 0.9 0.00015 21.6 0.1 2.2 2 0 0 2 2 2 2 KH domain KH_5 PF13184.6 gi|407464212|ref|YP_006775094.1| - 5.1e-08 32.9 5.2 7.1e-08 32.4 0.5 2.1 2 0 0 2 2 2 1 NusA-like KH domain KH_1 PF00013.29 gi|407464212|ref|YP_006775094.1| - 0.0009 19.0 2.9 0.018 14.9 0.5 2.3 1 1 1 2 2 2 2 KH domain UPF0113 PF03657.13 gi|407464212|ref|YP_006775094.1| - 0.17 12.1 0.9 10 6.5 0.1 2.2 2 0 0 2 2 2 0 UPF0113 PUA domain Ribosom_S12_S23 PF00164.25 gi|407464213|ref|YP_006775095.1| - 1.7e-46 156.5 0.3 2.2e-46 156.1 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.21 gi|407464214|ref|YP_006775096.1| - 4.9e-35 120.4 0.9 7.5e-35 119.8 0.9 1.3 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e CxxCxxCC PF03692.15 gi|407464216|ref|YP_006775098.1| - 4.7e-08 33.6 0.4 1.6e-07 31.9 0.4 1.8 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain SRA1 PF07304.11 gi|407464216|ref|YP_006775098.1| - 0.23 11.2 0.1 0.4 10.5 0.1 1.3 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) Peptidase_M10 PF00413.24 gi|407464217|ref|YP_006775099.1| - 2e-12 47.2 0.0 3.3e-12 46.5 0.0 1.3 1 0 0 1 1 1 1 Matrixin Big_1 PF02369.16 gi|407464217|ref|YP_006775099.1| - 1.1e-07 31.7 1.0 1.1e-07 31.7 1.0 3.4 3 0 0 3 3 3 1 Bacterial Ig-like domain (group 1) CarboxypepD_reg PF13620.6 gi|407464217|ref|YP_006775099.1| - 8.1e-05 22.8 6.2 0.0013 18.9 1.4 2.9 3 0 0 3 3 3 1 Carboxypeptidase regulatory-like domain Peptidase_M66 PF10462.9 gi|407464217|ref|YP_006775099.1| - 0.014 14.4 0.1 0.022 13.7 0.1 1.2 1 0 0 1 1 1 0 Peptidase M66 Metallopep PF12044.8 gi|407464217|ref|YP_006775099.1| - 0.059 12.0 0.0 0.092 11.3 0.0 1.2 1 0 0 1 1 1 0 Putative peptidase family Big_7 PF17957.1 gi|407464217|ref|YP_006775099.1| - 0.082 13.7 14.2 0.18 12.6 7.3 3.6 1 1 1 2 2 2 0 Bacterial Ig domain DUF824 PF05688.11 gi|407464217|ref|YP_006775099.1| - 0.093 12.6 0.0 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) Transthyretin PF00576.21 gi|407464217|ref|YP_006775099.1| - 0.13 13.0 0.0 0.34 11.6 0.0 1.7 1 0 0 1 1 1 0 HIUase/Transthyretin family DP-EP PF08985.11 gi|407464217|ref|YP_006775099.1| - 0.62 10.2 5.1 3.5 7.8 0.1 3.6 4 0 0 4 4 4 0 DP-EP family Trp_halogenase PF04820.14 gi|407464218|ref|YP_006775100.1| - 3e-05 23.1 0.0 0.0001 21.3 0.0 1.7 1 1 0 1 1 1 1 Tryptophan halogenase NAD_binding_2 PF03446.15 gi|407464218|ref|YP_006775100.1| - 0.002 18.3 0.0 0.0042 17.3 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|407464218|ref|YP_006775100.1| - 0.0055 16.0 0.0 0.0076 15.5 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|407464218|ref|YP_006775100.1| - 0.0098 15.5 0.0 0.019 14.6 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Toprim_Crpt PF13342.6 gi|407464218|ref|YP_006775100.1| - 0.04 13.9 0.1 0.84 9.7 0.0 2.4 2 0 0 2 2 2 0 C-terminal repeat of topoisomerase 2-Hacid_dh_C PF02826.19 gi|407464218|ref|YP_006775100.1| - 0.14 11.5 0.0 0.3 10.4 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Nitroreductase PF00881.24 gi|407464219|ref|YP_006775101.1| - 2e-26 93.0 0.1 2.6e-26 92.7 0.1 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|407464219|ref|YP_006775101.1| - 5.8e-13 48.9 0.0 1.6e-05 24.6 0.0 2.1 2 0 0 2 2 2 2 Putative TM nitroreductase Usp PF00582.26 gi|407464219|ref|YP_006775101.1| - 0.1 13.1 0.1 0.51 10.9 0.0 1.8 2 0 0 2 2 2 0 Universal stress protein family DUF1741 PF08427.10 gi|407464223|ref|YP_006775105.1| - 0.0071 16.0 1.2 0.008 15.9 1.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1741) Pox_polyA_pol_C PF12629.7 gi|407464223|ref|YP_006775105.1| - 0.014 15.3 0.3 0.015 15.1 0.3 1.0 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase C-terminal domain L_biotic_typeA PF04604.13 gi|407464223|ref|YP_006775105.1| - 0.12 12.2 0.7 0.23 11.3 0.7 1.6 1 1 0 1 1 1 0 Type-A lantibiotic DUF349 PF03993.12 gi|407464223|ref|YP_006775105.1| - 0.15 12.4 1.9 0.2 12.0 1.9 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF349) AIM24 PF01987.17 gi|407464224|ref|YP_006775106.1| - 2.1e-45 155.0 2.4 2.4e-45 154.8 2.4 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Ribosomal_S27e PF01667.17 gi|407464225|ref|YP_006775107.1| - 0.027 14.2 4.1 0.063 13.0 4.1 1.6 1 1 0 1 1 1 0 Ribosomal protein S27 ChapFlgA_N PF17656.1 gi|407464225|ref|YP_006775107.1| - 0.1 12.8 0.4 0.14 12.3 0.4 1.2 1 0 0 1 1 1 0 FlgA N-terminal domain zinc_ribbon_4 PF13717.6 gi|407464225|ref|YP_006775107.1| - 1 9.4 8.3 1.6 8.7 1.3 2.4 1 1 1 2 2 2 0 zinc-ribbon domain ID PF18543.1 gi|407464226|ref|YP_006775108.1| - 0.092 12.8 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Intracellular delivery domain zinc_ribbon_2 PF13240.6 gi|407464227|ref|YP_006775109.1| - 1.8e-06 27.5 3.6 3.2e-06 26.6 3.6 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|407464227|ref|YP_006775109.1| - 0.00024 21.1 1.2 0.0004 20.3 1.2 1.4 1 0 0 1 1 1 1 Double zinc ribbon NOB1_Zn_bind PF08772.11 gi|407464227|ref|YP_006775109.1| - 0.0016 18.5 0.4 0.0022 18.1 0.4 1.3 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like zf-ribbon_3 PF13248.6 gi|407464227|ref|YP_006775109.1| - 0.0058 16.0 1.9 49 3.5 0.0 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Prok-RING_1 PF14446.6 gi|407464227|ref|YP_006775109.1| - 0.021 14.7 2.4 0.034 14.1 2.4 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF2207 PF09972.9 gi|407464227|ref|YP_006775109.1| - 0.031 13.0 0.1 0.035 12.9 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-NADH-PPase PF09297.11 gi|407464227|ref|YP_006775109.1| - 0.031 13.9 0.1 0.031 13.9 0.1 2.0 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain UPF0547 PF10571.9 gi|407464227|ref|YP_006775109.1| - 0.052 13.6 2.8 0.12 12.5 0.2 2.2 1 1 1 2 2 2 0 Uncharacterised protein family UPF0547 YhfH PF14149.6 gi|407464227|ref|YP_006775109.1| - 0.055 13.5 1.4 4.7 7.3 0.3 2.4 1 1 1 2 2 2 0 YhfH-like protein Nudix_N_2 PF14803.6 gi|407464227|ref|YP_006775109.1| - 0.066 13.1 1.4 0.57 10.1 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal zinc_ribbon_15 PF17032.5 gi|407464227|ref|YP_006775109.1| - 0.12 13.1 3.1 0.21 12.3 3.1 1.4 1 0 0 1 1 1 0 zinc-ribbon family HypA PF01155.19 gi|407464227|ref|YP_006775109.1| - 0.16 12.0 1.0 0.23 11.5 1.0 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|407464227|ref|YP_006775109.1| - 0.24 11.6 4.3 0.23 11.6 2.9 1.7 2 0 0 2 2 1 0 Zinc ribbon domain zf_UBZ PF18439.1 gi|407464227|ref|YP_006775109.1| - 0.3 10.7 3.4 0.97 9.1 0.3 2.2 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger Sigma_reg_N PF13800.6 gi|407464227|ref|YP_006775109.1| - 0.39 11.0 3.8 5.9 7.2 0.2 2.5 3 0 0 3 3 2 0 Sigma factor regulator N-terminal A2L_zn_ribbon PF08792.10 gi|407464227|ref|YP_006775109.1| - 0.45 10.3 3.0 1.7 8.5 3.0 1.9 1 1 0 1 1 1 0 A2L zinc ribbon domain DUF2976 PF11190.8 gi|407464227|ref|YP_006775109.1| - 3 7.7 7.5 62 3.5 4.1 3.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) TM2 PF05154.16 gi|407464227|ref|YP_006775109.1| - 3.6 8.0 22.7 12 6.3 22.7 1.9 1 1 0 1 1 1 0 TM2 domain LapA_dom PF06305.11 gi|407464227|ref|YP_006775109.1| - 7.4 6.5 7.0 0.53 10.1 0.8 2.1 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain SNase PF00565.17 gi|407464228|ref|YP_006775110.1| - 5.2e-08 33.3 0.0 8.7e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Staphylococcal nuclease homologue Excalibur PF05901.11 gi|407464228|ref|YP_006775110.1| - 0.00087 19.9 0.9 0.0026 18.3 0.9 1.9 1 0 0 1 1 1 1 Excalibur calcium-binding domain Sigma70_r4_2 PF08281.12 gi|407464229|ref|YP_006775111.1| - 6e-06 25.8 0.0 6.6e-05 22.5 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|407464229|ref|YP_006775111.1| - 1.5e-05 24.6 0.2 4.1e-05 23.2 0.0 1.8 2 0 0 2 2 2 1 Homeodomain-like domain HTH_38 PF13936.6 gi|407464229|ref|YP_006775111.1| - 2.3e-05 24.1 0.0 0.0013 18.4 0.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|407464229|ref|YP_006775111.1| - 0.0022 17.5 0.0 0.0048 16.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Terminase_5 PF06056.12 gi|407464229|ref|YP_006775111.1| - 0.0027 17.6 0.0 0.006 16.4 0.0 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_11 PF08279.12 gi|407464229|ref|YP_006775111.1| - 0.0052 16.7 0.0 0.01 15.7 0.0 1.5 1 0 0 1 1 1 1 HTH domain DUF2774 PF11242.8 gi|407464229|ref|YP_006775111.1| - 0.014 15.6 0.0 0.028 14.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) SpoIIID PF12116.8 gi|407464229|ref|YP_006775111.1| - 0.016 15.3 0.9 0.043 13.9 0.1 1.9 2 0 0 2 2 2 0 Stage III sporulation protein D UPF0122 PF04297.14 gi|407464229|ref|YP_006775111.1| - 0.021 15.1 1.5 0.042 14.1 0.8 2.0 1 1 1 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_7 PF02796.15 gi|407464229|ref|YP_006775111.1| - 0.024 14.7 0.0 0.046 13.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Sigma70_ECF PF07638.11 gi|407464229|ref|YP_006775111.1| - 0.031 14.2 0.0 0.055 13.4 0.0 1.4 1 0 0 1 1 1 0 ECF sigma factor HTH_Tnp_1 PF01527.20 gi|407464229|ref|YP_006775111.1| - 0.058 13.7 0.2 0.087 13.1 0.2 1.4 1 0 0 1 1 1 0 Transposase Phage_antitermQ PF06530.12 gi|407464229|ref|YP_006775111.1| - 0.06 13.3 0.2 0.13 12.2 0.2 1.5 1 0 0 1 1 1 0 Phage antitermination protein Q HTH_3 PF01381.22 gi|407464229|ref|YP_006775111.1| - 0.11 12.6 0.0 0.43 10.7 0.0 2.0 3 0 0 3 3 3 0 Helix-turn-helix HTH_29 PF13551.6 gi|407464229|ref|YP_006775111.1| - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Laminin_G_3 PF13385.6 gi|407464231|ref|YP_006775113.1| - 0.00023 21.3 1.0 0.00023 21.3 1.0 4.1 3 1 1 4 4 4 1 Concanavalin A-like lectin/glucanases superfamily DUF1080 PF06439.11 gi|407464231|ref|YP_006775113.1| - 0.058 13.5 0.3 0.37 10.9 0.0 2.4 3 0 0 3 3 3 0 Domain of Unknown Function (DUF1080) tRNA-synt_1 PF00133.22 gi|407464232|ref|YP_006775114.1| - 7.9e-59 199.4 5.3 2.8e-40 138.2 0.4 2.7 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|407464232|ref|YP_006775114.1| - 2.2e-23 82.7 0.4 9.3e-12 44.4 0.1 3.1 2 1 1 3 3 3 2 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|407464232|ref|YP_006775114.1| - 4.5e-22 78.6 1.3 7.8e-22 77.9 0.4 1.8 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|407464232|ref|YP_006775114.1| - 9e-11 41.7 5.5 1.4e-06 27.9 0.1 3.1 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|407464232|ref|YP_006775114.1| - 1.9e-07 30.8 0.3 6e-07 29.2 0.0 2.0 2 0 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 Fungal_trans_2 PF11951.8 gi|407464232|ref|YP_006775114.1| - 0.016 14.1 0.2 0.026 13.4 0.2 1.2 1 0 0 1 1 1 0 Fungal specific transcription factor domain Poty_PP PF08440.10 gi|407464232|ref|YP_006775114.1| - 0.1 11.7 1.3 0.2 10.7 1.3 1.4 1 0 0 1 1 1 0 Potyviridae polyprotein tRNA-synt_2c PF01411.19 gi|407464233|ref|YP_006775115.1| - 3.8e-82 276.6 2.5 9.9e-82 275.2 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|407464233|ref|YP_006775115.1| - 8.7e-15 54.6 0.9 8.7e-15 54.6 0.9 2.3 2 0 0 2 2 2 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.19 gi|407464233|ref|YP_006775115.1| - 2.3e-09 37.8 9.6 1.2e-08 35.5 9.6 2.3 1 1 0 1 1 1 1 DHHA1 domain YolD PF08863.10 gi|407464233|ref|YP_006775115.1| - 0.0069 16.4 0.3 0.0069 16.4 0.3 2.8 3 0 0 3 3 3 1 YolD-like protein PVL_ORF50 PF07768.11 gi|407464233|ref|YP_006775115.1| - 0.3 11.4 6.6 0.072 13.4 2.7 1.9 2 0 0 2 2 2 0 PVL ORF-50-like family DUF2072 PF09845.9 gi|407464233|ref|YP_006775115.1| - 7.2 6.9 9.3 3.9 7.7 1.0 3.1 3 0 0 3 3 3 0 Zn-ribbon containing protein DUF389 PF04087.14 gi|407464234|ref|YP_006775116.1| - 5.7e-30 104.2 15.3 5.7e-30 104.2 15.3 2.3 3 0 0 3 3 3 1 Domain of unknown function (DUF389) COX14 PF14880.6 gi|407464234|ref|YP_006775116.1| - 0.015 15.1 0.5 1.6 8.6 0.0 2.7 2 0 0 2 2 2 0 Cytochrome oxidase c assembly TRAP-gamma PF07074.12 gi|407464234|ref|YP_006775116.1| - 0.13 11.9 3.4 0.067 12.7 1.1 1.8 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) TssN PF17555.2 gi|407464234|ref|YP_006775116.1| - 0.37 10.1 10.5 0.47 9.8 1.8 2.2 2 0 0 2 2 2 0 Type VI secretion system, TssN Asp4 PF16996.5 gi|407464234|ref|YP_006775116.1| - 0.41 10.5 0.0 0.41 10.5 0.0 3.1 3 0 0 3 3 3 0 Accessory secretory protein Sec Asp4 Ribosomal_60s PF00428.19 gi|407464236|ref|YP_006775118.1| - 4e-15 56.2 19.0 4.6e-15 56.0 19.0 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein DUF5327 PF17261.2 gi|407464236|ref|YP_006775118.1| - 0.039 14.7 0.9 0.049 14.4 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5327) DUF3138 PF11336.8 gi|407464236|ref|YP_006775118.1| - 1.8 7.0 6.6 2.1 6.9 6.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) UPF0126 PF03458.13 gi|407464237|ref|YP_006775119.1| - 1.2e-36 124.4 30.7 1e-18 66.9 8.8 2.7 2 1 1 3 3 3 2 UPF0126 domain TNFR_16_TM PF18422.1 gi|407464237|ref|YP_006775119.1| - 0.21 11.6 0.1 0.21 11.6 0.1 3.4 5 0 0 5 5 5 0 Tumor necrosis factor receptor member 16 trans-membrane domain SIR4_SID PF16991.5 gi|407464238|ref|YP_006775120.1| - 0.0051 16.9 0.2 0.0059 16.7 0.2 1.0 1 0 0 1 1 1 1 Sir4 SID domain DnaI_N PF07319.11 gi|407464238|ref|YP_006775120.1| - 0.061 14.0 0.1 0.075 13.7 0.1 1.0 1 0 0 1 1 1 0 Primosomal protein DnaI N-terminus DUF2164 PF09932.9 gi|407464238|ref|YP_006775120.1| - 0.1 12.7 0.1 1.3 9.1 0.0 2.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2164) RL10P_insert PF17777.1 gi|407464240|ref|YP_006775122.1| - 1.2e-19 70.1 0.0 3.2e-19 68.7 0.0 1.8 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_L10 PF00466.20 gi|407464240|ref|YP_006775122.1| - 4.7e-19 68.4 1.3 8.8e-19 67.5 0.7 1.8 2 0 0 2 2 2 1 Ribosomal protein L10 Ribosomal_L1 PF00687.21 gi|407464241|ref|YP_006775123.1| - 1.1e-41 142.9 4.5 1.2e-41 142.7 4.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family DUF2533 PF10752.9 gi|407464241|ref|YP_006775123.1| - 0.074 13.5 0.3 0.22 12.0 0.3 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) DUF3873 PF12989.7 gi|407464241|ref|YP_006775123.1| - 0.15 12.5 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3873) AsnC_trans_reg PF01037.21 gi|407464242|ref|YP_006775124.1| - 3.3e-15 55.8 0.0 4.5e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|407464242|ref|YP_006775124.1| - 5.5e-10 38.7 0.1 9e-10 38.0 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|407464242|ref|YP_006775124.1| - 3.3e-08 33.2 0.0 5.3e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR PF01047.22 gi|407464242|ref|YP_006775124.1| - 0.001 18.9 0.1 0.0022 17.9 0.1 1.5 1 0 0 1 1 1 1 MarR family B-block_TFIIIC PF04182.12 gi|407464242|ref|YP_006775124.1| - 0.0011 19.1 0.2 0.0017 18.5 0.2 1.4 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC TrmB PF01978.19 gi|407464242|ref|YP_006775124.1| - 0.0015 18.4 0.1 0.0034 17.2 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|407464242|ref|YP_006775124.1| - 0.0017 18.3 0.8 0.0037 17.2 0.2 1.8 2 1 0 2 2 2 1 HTH domain Ribosomal_S25 PF03297.15 gi|407464242|ref|YP_006775124.1| - 0.0022 18.2 1.4 0.0096 16.1 0.2 2.0 2 0 0 2 2 2 1 S25 ribosomal protein Mga PF05043.13 gi|407464242|ref|YP_006775124.1| - 0.0039 17.7 0.6 0.0076 16.8 0.1 1.6 2 0 0 2 2 2 1 Mga helix-turn-helix domain DDRGK PF09756.9 gi|407464242|ref|YP_006775124.1| - 0.032 13.8 1.0 5.5 6.5 0.1 2.1 2 0 0 2 2 2 0 DDRGK domain HTH_psq PF05225.16 gi|407464242|ref|YP_006775124.1| - 0.072 12.8 0.1 0.19 11.5 0.1 1.7 2 0 0 2 2 2 0 helix-turn-helix, Psq domain Rrf2 PF02082.20 gi|407464242|ref|YP_006775124.1| - 0.073 13.4 0.2 0.33 11.3 0.1 1.9 2 0 0 2 2 2 0 Transcriptional regulator MarR_2 PF12802.7 gi|407464242|ref|YP_006775124.1| - 0.078 12.9 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 MarR family Ribosomal_L11_N PF03946.14 gi|407464243|ref|YP_006775125.1| - 5.1e-22 77.5 0.4 1.1e-21 76.4 0.2 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|407464243|ref|YP_006775125.1| - 4.3e-18 65.6 1.0 6.6e-18 65.0 1.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Spt5-NGN PF03439.13 gi|407464244|ref|YP_006775126.1| - 3.1e-20 71.9 0.0 4.9e-20 71.2 0.0 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|407464244|ref|YP_006775126.1| - 1.2e-06 28.3 0.5 2.4e-06 27.3 0.5 1.5 1 0 0 1 1 1 1 KOW motif SecE PF00584.20 gi|407464245|ref|YP_006775127.1| - 1.8e-06 27.8 0.0 2.1e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Frag1 PF10277.9 gi|407464245|ref|YP_006775127.1| - 0.0052 16.3 0.0 0.0057 16.2 0.0 1.0 1 0 0 1 1 1 1 Frag1/DRAM/Sfk1 family tRNA_deacylase PF04414.12 gi|407464246|ref|YP_006775128.1| - 4.9e-62 209.1 0.0 5.8e-62 208.9 0.0 1.0 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase DNA_binding_1 PF01035.20 gi|407464247|ref|YP_006775129.1| - 3.9e-28 97.4 0.0 4.6e-28 97.2 0.0 1.1 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Ribosomal_L19e PF01280.20 gi|407464248|ref|YP_006775130.1| - 9.3e-40 136.0 8.4 1.1e-39 135.7 8.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Ribosomal_L32e PF01655.18 gi|407464249|ref|YP_006775131.1| - 8.8e-34 116.2 0.1 1e-33 115.9 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 PEPCK_ATP PF01293.20 gi|407464250|ref|YP_006775132.1| - 4.6e-211 701.5 0.0 5.2e-211 701.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase Peptidase_S8 PF00082.22 gi|407464251|ref|YP_006775133.1| - 3e-56 190.9 0.2 6.2e-56 189.8 0.2 1.5 1 0 0 1 1 1 1 Subtilase family PA PF02225.22 gi|407464251|ref|YP_006775133.1| - 4.4e-14 52.3 0.1 1.5e-13 50.6 0.1 1.9 1 0 0 1 1 1 1 PA domain Sod_Fe_C PF02777.18 gi|407464252|ref|YP_006775134.1| - 4.3e-39 132.8 0.0 7.3e-39 132.1 0.0 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|407464252|ref|YP_006775134.1| - 4.1e-29 100.9 0.4 7.5e-29 100.0 0.4 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Prefoldin PF02996.17 gi|407464253|ref|YP_006775135.1| - 5.3e-18 65.1 5.0 8.3e-18 64.4 2.4 2.0 1 1 1 2 2 2 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|407464253|ref|YP_006775135.1| - 0.013 15.5 0.4 0.013 15.5 0.4 2.4 2 1 0 2 2 2 0 Prefoldin subunit DUF3638 PF12340.8 gi|407464253|ref|YP_006775135.1| - 0.027 13.8 1.6 0.081 12.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3638) SKA2 PF16740.5 gi|407464253|ref|YP_006775135.1| - 0.033 14.0 1.3 0.033 14.0 1.3 2.1 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 PilO PF04350.13 gi|407464253|ref|YP_006775135.1| - 0.034 14.3 2.4 0.034 14.3 2.4 2.0 2 0 0 2 2 2 0 Pilus assembly protein, PilO DUF3848 PF12959.7 gi|407464253|ref|YP_006775135.1| - 0.051 13.6 0.2 0.051 13.6 0.2 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3848) DUF1840 PF08895.11 gi|407464253|ref|YP_006775135.1| - 0.052 13.9 3.8 0.3 11.5 0.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1840) CENP-F_leu_zip PF10473.9 gi|407464253|ref|YP_006775135.1| - 0.1 12.6 7.5 0.53 10.3 0.6 2.1 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YlqD PF11068.8 gi|407464253|ref|YP_006775135.1| - 0.12 12.7 4.5 0.92 9.9 0.8 2.3 2 0 0 2 2 2 0 YlqD protein DUF4174 PF13778.6 gi|407464253|ref|YP_006775135.1| - 0.14 12.7 1.8 0.18 12.3 1.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4174) FlgN PF05130.12 gi|407464253|ref|YP_006775135.1| - 0.15 12.6 6.2 0.99 9.9 0.8 2.1 2 0 0 2 2 2 0 FlgN protein aGPT-Pplase1 PF18723.1 gi|407464253|ref|YP_006775135.1| - 0.16 11.4 0.5 0.18 11.2 0.5 1.0 1 0 0 1 1 1 0 alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 1 Paralemmin PF03285.15 gi|407464253|ref|YP_006775135.1| - 0.26 10.8 4.8 4.6 6.7 0.5 2.0 1 1 1 2 2 2 0 Paralemmin Tektin PF03148.14 gi|407464253|ref|YP_006775135.1| - 0.38 9.5 5.1 0.07 11.9 0.8 1.7 2 0 0 2 2 2 0 Tektin family OmpH PF03938.14 gi|407464253|ref|YP_006775135.1| - 0.43 10.9 11.2 0.31 11.4 2.7 2.1 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) ABC_tran_CTD PF16326.5 gi|407464253|ref|YP_006775135.1| - 0.79 10.0 10.2 0.23 11.7 3.6 2.3 2 0 0 2 2 2 0 ABC transporter C-terminal domain FliD_C PF07195.12 gi|407464253|ref|YP_006775135.1| - 3.6 6.9 7.0 6.3 6.1 7.0 1.6 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus SRP54 PF00448.22 gi|407464254|ref|YP_006775136.1| - 1.4e-71 240.2 0.4 2e-71 239.7 0.4 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|407464254|ref|YP_006775136.1| - 6.7e-11 42.3 5.9 6.7e-11 42.3 5.9 2.0 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.6 gi|407464254|ref|YP_006775136.1| - 4.7e-07 29.7 0.2 8e-07 29.0 0.2 1.3 1 0 0 1 1 1 1 AAA domain Trypan_PARP PF05887.11 gi|407464254|ref|YP_006775136.1| - 8.6e-06 25.8 129.5 0.00015 21.7 59.5 3.3 1 1 2 3 3 2 2 Procyclic acidic repetitive protein (PARP) Zeta_toxin PF06414.12 gi|407464254|ref|YP_006775136.1| - 1e-05 24.9 0.2 1.6e-05 24.3 0.2 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_17 PF13207.6 gi|407464254|ref|YP_006775136.1| - 0.00016 22.1 0.1 0.00036 21.0 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|407464254|ref|YP_006775136.1| - 0.00043 20.6 0.0 0.001 19.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|407464254|ref|YP_006775136.1| - 0.00054 20.4 0.1 0.0014 19.1 0.1 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) cobW PF02492.19 gi|407464254|ref|YP_006775136.1| - 0.00091 18.8 1.8 0.0062 16.1 1.8 2.1 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain NTPase_1 PF03266.15 gi|407464254|ref|YP_006775136.1| - 0.0037 17.2 1.0 0.47 10.3 1.0 2.3 1 1 0 1 1 1 1 NTPase AAA_33 PF13671.6 gi|407464254|ref|YP_006775136.1| - 0.004 17.3 0.0 0.0068 16.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 gi|407464254|ref|YP_006775136.1| - 0.0053 16.0 0.2 0.0083 15.4 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 gi|407464254|ref|YP_006775136.1| - 0.0053 17.2 0.0 0.012 16.0 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain PIF1 PF05970.14 gi|407464254|ref|YP_006775136.1| - 0.0066 15.7 0.1 0.01 15.0 0.1 1.2 1 0 0 1 1 1 1 PIF1-like helicase KdpD PF02702.17 gi|407464254|ref|YP_006775136.1| - 0.007 15.9 0.1 0.013 15.0 0.1 1.4 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain Thymidylate_kin PF02223.17 gi|407464254|ref|YP_006775136.1| - 0.0098 15.6 0.0 0.032 13.9 0.0 2.0 2 0 0 2 2 2 1 Thymidylate kinase ABC_tran PF00005.27 gi|407464254|ref|YP_006775136.1| - 0.0099 16.4 0.0 0.02 15.4 0.0 1.6 1 0 0 1 1 1 1 ABC transporter TPP_enzyme_M PF00205.22 gi|407464254|ref|YP_006775136.1| - 0.01 15.5 1.1 0.087 12.6 0.2 2.8 4 0 0 4 4 3 0 Thiamine pyrophosphate enzyme, central domain AAA_14 PF13173.6 gi|407464254|ref|YP_006775136.1| - 0.011 15.8 0.7 0.022 14.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain SPOUT_MTase PF02590.17 gi|407464254|ref|YP_006775136.1| - 0.012 15.6 0.1 0.037 14.0 0.0 1.8 1 1 0 1 1 1 0 Predicted SPOUT methyltransferase APS_kinase PF01583.20 gi|407464254|ref|YP_006775136.1| - 0.012 15.5 0.1 0.064 13.1 0.0 2.0 2 0 0 2 2 2 0 Adenylylsulphate kinase KTI12 PF08433.10 gi|407464254|ref|YP_006775136.1| - 0.017 14.6 0.6 0.053 13.0 0.0 2.0 2 1 0 2 2 2 0 Chromatin associated protein KTI12 CbiA PF01656.23 gi|407464254|ref|YP_006775136.1| - 0.025 14.6 0.1 0.067 13.3 0.1 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_19 PF13245.6 gi|407464254|ref|YP_006775136.1| - 0.027 14.8 0.1 0.047 14.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain TK PF00265.18 gi|407464254|ref|YP_006775136.1| - 0.03 14.2 0.1 0.051 13.4 0.1 1.3 1 0 0 1 1 1 0 Thymidine kinase CLP1_P PF16575.5 gi|407464254|ref|YP_006775136.1| - 0.056 13.2 0.1 0.12 12.2 0.0 1.5 2 0 0 2 2 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_7 PF12775.7 gi|407464254|ref|YP_006775136.1| - 0.057 12.9 1.3 0.089 12.3 0.1 1.8 2 1 0 2 2 1 0 P-loop containing dynein motor region AAA_28 PF13521.6 gi|407464254|ref|YP_006775136.1| - 0.07 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|407464254|ref|YP_006775136.1| - 0.075 12.7 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 gi|407464254|ref|YP_006775136.1| - 0.079 12.9 0.2 0.19 11.6 0.2 1.7 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B T2SSE PF00437.20 gi|407464254|ref|YP_006775136.1| - 0.1 11.7 0.0 0.17 10.9 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1 PF01926.23 gi|407464254|ref|YP_006775136.1| - 0.37 10.9 3.3 0.56 10.3 0.7 2.5 2 1 0 2 2 2 0 50S ribosome-binding GTPase ResIII PF04851.15 gi|407464254|ref|YP_006775136.1| - 0.58 10.1 2.9 0.96 9.4 1.1 2.1 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Ribosomal_L5e PF17144.4 gi|407464255|ref|YP_006775137.1| - 2.3e-15 56.9 1.8 1.6e-12 47.7 0.7 2.6 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18p PF00861.22 gi|407464255|ref|YP_006775137.1| - 0.021 15.2 0.2 0.03 14.7 0.2 1.3 1 0 0 1 1 1 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_S5 PF00333.20 gi|407464256|ref|YP_006775138.1| - 2.1e-21 75.7 0.8 3.6e-21 74.9 0.8 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|407464256|ref|YP_006775138.1| - 3e-16 58.6 0.1 5.4e-16 57.8 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.20 gi|407464257|ref|YP_006775139.1| - 1.9e-10 40.4 0.0 3.7e-10 39.5 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L27A PF00828.19 gi|407464258|ref|YP_006775140.1| - 5.8e-16 59.3 0.3 9.2e-16 58.7 0.3 1.3 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SecY PF00344.20 gi|407464259|ref|YP_006775141.1| - 8.6e-63 212.4 19.9 1.1e-62 212.1 19.9 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|407464259|ref|YP_006775141.1| - 4.7e-11 42.3 1.7 2.1e-10 40.3 1.7 2.2 1 0 0 1 1 1 1 Plug domain of Sec61p AAA_17 PF13207.6 gi|407464260|ref|YP_006775142.1| - 5.5e-36 124.0 0.1 7.4e-36 123.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|407464260|ref|YP_006775142.1| - 2.6e-10 40.9 0.0 4.1e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|407464260|ref|YP_006775142.1| - 1.3e-06 28.2 0.2 2.3e-06 27.4 0.2 1.6 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_28 PF13521.6 gi|407464260|ref|YP_006775142.1| - 1.7e-06 28.4 0.1 5e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|407464260|ref|YP_006775142.1| - 1e-05 25.5 2.4 0.0004 20.3 0.2 2.2 1 1 0 2 2 2 1 NTPase KTI12 PF08433.10 gi|407464260|ref|YP_006775142.1| - 1.9e-05 24.3 0.2 2.8e-05 23.7 0.2 1.3 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_33 PF13671.6 gi|407464260|ref|YP_006775142.1| - 3.8e-05 23.9 0.1 0.00012 22.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|407464260|ref|YP_006775142.1| - 9.3e-05 22.2 0.0 0.0002 21.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain Roc PF08477.13 gi|407464260|ref|YP_006775142.1| - 0.00013 22.1 0.1 0.00024 21.3 0.1 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATPase_2 PF01637.18 gi|407464260|ref|YP_006775142.1| - 0.00034 20.6 0.4 0.00059 19.8 0.2 1.4 2 0 0 2 2 1 1 ATPase domain predominantly from Archaea MMR_HSR1 PF01926.23 gi|407464260|ref|YP_006775142.1| - 0.00041 20.4 0.3 0.00083 19.4 0.3 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_14 PF13173.6 gi|407464260|ref|YP_006775142.1| - 0.00065 19.7 0.4 0.0012 18.9 0.4 1.8 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|407464260|ref|YP_006775142.1| - 0.00073 19.5 0.0 0.00084 19.3 0.0 1.3 1 0 0 1 1 1 1 NACHT domain AAA_24 PF13479.6 gi|407464260|ref|YP_006775142.1| - 0.00077 19.2 0.0 0.0013 18.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain NB-ARC PF00931.22 gi|407464260|ref|YP_006775142.1| - 0.0011 18.2 0.0 0.0016 17.7 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain MobB PF03205.14 gi|407464260|ref|YP_006775142.1| - 0.0012 18.8 0.1 0.0023 17.8 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 gi|407464260|ref|YP_006775142.1| - 0.0013 18.4 0.2 0.0027 17.3 0.1 1.6 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.6 gi|407464260|ref|YP_006775142.1| - 0.0014 19.0 0.4 0.0028 18.0 0.4 1.7 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|407464260|ref|YP_006775142.1| - 0.0018 17.3 0.1 0.003 16.6 0.1 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 gi|407464260|ref|YP_006775142.1| - 0.0019 18.0 0.1 0.0045 16.8 0.1 1.6 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA PF00004.29 gi|407464260|ref|YP_006775142.1| - 0.0023 18.4 0.7 0.0039 17.6 0.3 1.7 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) DnaB_C PF03796.15 gi|407464260|ref|YP_006775142.1| - 0.0027 17.1 0.2 0.0055 16.1 0.2 1.5 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_22 PF13401.6 gi|407464260|ref|YP_006775142.1| - 0.0028 17.9 0.1 0.0067 16.7 0.1 1.6 1 1 0 1 1 1 1 AAA domain 6PF2K PF01591.18 gi|407464260|ref|YP_006775142.1| - 0.0032 16.8 0.0 0.0067 15.8 0.0 1.6 2 0 0 2 2 2 1 6-phosphofructo-2-kinase Viral_helicase1 PF01443.18 gi|407464260|ref|YP_006775142.1| - 0.0056 16.5 0.0 0.0099 15.6 0.0 1.6 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase Thymidylate_kin PF02223.17 gi|407464260|ref|YP_006775142.1| - 0.0069 16.1 0.8 0.025 14.3 0.8 2.2 1 1 0 1 1 1 1 Thymidylate kinase ABC_tran PF00005.27 gi|407464260|ref|YP_006775142.1| - 0.0098 16.4 2.9 0.015 15.8 2.9 1.7 1 1 0 1 1 1 1 ABC transporter DUF2075 PF09848.9 gi|407464260|ref|YP_006775142.1| - 0.0099 15.2 0.2 0.013 14.7 0.1 1.3 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) APS_kinase PF01583.20 gi|407464260|ref|YP_006775142.1| - 0.01 15.7 0.0 0.61 10.0 0.0 2.1 2 0 0 2 2 2 0 Adenylylsulphate kinase Zeta_toxin PF06414.12 gi|407464260|ref|YP_006775142.1| - 0.011 15.1 0.3 0.048 12.9 0.1 2.0 2 0 0 2 2 2 0 Zeta toxin RsgA_GTPase PF03193.16 gi|407464260|ref|YP_006775142.1| - 0.013 15.5 0.1 0.029 14.3 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_7 PF12775.7 gi|407464260|ref|YP_006775142.1| - 0.013 15.0 0.1 0.021 14.3 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region TrwB_AAD_bind PF10412.9 gi|407464260|ref|YP_006775142.1| - 0.014 14.4 0.1 0.022 13.7 0.1 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_16 PF13191.6 gi|407464260|ref|YP_006775142.1| - 0.018 15.5 0.0 0.033 14.6 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 gi|407464260|ref|YP_006775142.1| - 0.03 14.7 0.1 0.096 13.1 0.0 1.8 2 1 0 2 2 1 0 RNA helicase Arf PF00025.21 gi|407464260|ref|YP_006775142.1| - 0.041 13.3 0.8 0.09 12.2 0.1 1.9 2 1 0 2 2 2 0 ADP-ribosylation factor family AAA_5 PF07728.14 gi|407464260|ref|YP_006775142.1| - 0.044 13.8 0.1 0.13 12.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Ras PF00071.22 gi|407464260|ref|YP_006775142.1| - 0.054 13.1 0.1 0.15 11.7 0.1 1.8 1 0 0 1 1 1 0 Ras family KAP_NTPase PF07693.14 gi|407464260|ref|YP_006775142.1| - 0.067 12.4 0.0 0.13 11.4 0.0 1.3 1 1 0 1 1 1 0 KAP family P-loop domain AAA_3 PF07726.11 gi|407464260|ref|YP_006775142.1| - 0.082 12.8 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|407464260|ref|YP_006775142.1| - 0.085 12.4 0.0 1.1 8.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain RuvB_N PF05496.12 gi|407464260|ref|YP_006775142.1| - 0.087 12.6 0.3 0.35 10.6 0.1 1.9 1 1 1 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain TsaE PF02367.17 gi|407464260|ref|YP_006775142.1| - 0.097 12.7 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE EMC3_TMCO1 PF01956.16 gi|407464261|ref|YP_006775143.1| - 1e-16 61.1 11.9 1.5e-15 57.4 6.8 2.0 2 0 0 2 2 2 2 Integral membrane protein EMC3/TMCO1-like PSII_Pbs31 PF18240.1 gi|407464261|ref|YP_006775143.1| - 0.0059 17.0 0.3 0.0092 16.4 0.3 1.2 1 0 0 1 1 1 1 Photosystem II Psb31 protein Cytidylate_kin2 PF13189.6 gi|407464262|ref|YP_006775144.1| - 1.9e-13 50.9 0.1 1.4e-12 48.1 0.1 1.9 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|407464262|ref|YP_006775144.1| - 1.3e-11 45.1 0.0 1.7e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|407464262|ref|YP_006775144.1| - 2.2e-09 37.8 0.0 4.2e-09 36.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|407464262|ref|YP_006775144.1| - 3.9e-07 30.0 0.1 3.6e-05 23.6 0.0 2.2 1 1 1 2 2 2 1 Cytidylate kinase SKI PF01202.22 gi|407464262|ref|YP_006775144.1| - 6.6e-07 29.6 0.1 3e-06 27.5 0.1 2.0 1 1 0 1 1 1 1 Shikimate kinase ADK PF00406.22 gi|407464262|ref|YP_006775144.1| - 8.9e-06 25.9 0.4 6.7e-05 23.0 0.0 2.2 2 1 0 2 2 2 1 Adenylate kinase AAA_28 PF13521.6 gi|407464262|ref|YP_006775144.1| - 9.5e-06 25.9 0.0 1.5e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|407464262|ref|YP_006775144.1| - 5.8e-05 23.3 0.0 0.00051 20.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|407464262|ref|YP_006775144.1| - 0.00025 21.5 0.0 0.0004 20.8 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) KTI12 PF08433.10 gi|407464262|ref|YP_006775144.1| - 0.0015 18.0 0.4 0.013 15.0 0.0 2.0 1 1 1 2 2 2 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 gi|407464262|ref|YP_006775144.1| - 0.0045 17.4 0.0 0.0046 17.4 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|407464262|ref|YP_006775144.1| - 0.0076 16.5 0.0 0.016 15.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|407464262|ref|YP_006775144.1| - 0.0077 16.6 0.0 0.013 15.8 0.0 1.5 1 0 0 1 1 1 1 RNA helicase AAA_24 PF13479.6 gi|407464262|ref|YP_006775144.1| - 0.0081 15.9 0.1 0.022 14.5 0.0 1.8 2 0 0 2 2 2 1 AAA domain dNK PF01712.19 gi|407464262|ref|YP_006775144.1| - 0.011 15.6 0.0 0.14 12.0 0.0 2.2 2 0 0 2 2 2 0 Deoxynucleoside kinase RuvB_N PF05496.12 gi|407464262|ref|YP_006775144.1| - 0.012 15.4 0.0 0.019 14.7 0.0 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 gi|407464262|ref|YP_006775144.1| - 0.014 15.4 0.0 0.022 14.7 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain Zeta_toxin PF06414.12 gi|407464262|ref|YP_006775144.1| - 0.026 13.8 0.1 0.44 9.8 0.1 2.2 2 0 0 2 2 2 0 Zeta toxin NTPase_1 PF03266.15 gi|407464262|ref|YP_006775144.1| - 0.03 14.2 0.0 0.05 13.5 0.0 1.4 1 0 0 1 1 1 0 NTPase AAA_14 PF13173.6 gi|407464262|ref|YP_006775144.1| - 0.036 14.1 0.0 0.086 12.9 0.0 2.0 1 1 0 1 1 1 0 AAA domain Hydin_ADK PF17213.3 gi|407464262|ref|YP_006775144.1| - 0.041 14.2 0.0 0.092 13.0 0.0 1.6 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Nif11 PF07862.11 gi|407464262|ref|YP_006775144.1| - 0.2 12.0 1.1 17 5.8 0.2 2.9 2 0 0 2 2 2 0 Nif11 domain TruB_N PF01509.18 gi|407464263|ref|YP_006775145.1| - 1.1e-23 84.3 4.0 2.8e-14 53.7 0.0 3.6 2 1 1 3 3 3 2 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|407464263|ref|YP_006775145.1| - 1.3e-19 70.0 0.2 3.6e-19 68.7 0.0 1.9 2 0 0 2 2 2 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 gi|407464263|ref|YP_006775145.1| - 7.1e-19 67.5 0.2 1.9e-18 66.2 0.3 1.6 2 0 0 2 2 2 1 PUA domain DKCLD PF08068.12 gi|407464263|ref|YP_006775145.1| - 2.1e-11 43.7 0.0 5.2e-11 42.5 0.0 1.7 2 0 0 2 2 2 1 DKCLD (NUC011) domain FlgD_ig PF13860.6 gi|407464264|ref|YP_006775146.1| - 0.013 15.4 0.0 0.033 14.1 0.0 1.7 1 0 0 1 1 1 0 FlgD Ig-like domain ParBc PF02195.18 gi|407464265|ref|YP_006775147.1| - 5.8e-19 68.2 1.3 8.2e-19 67.7 0.3 1.8 2 0 0 2 2 2 1 ParB-like nuclease domain DUF3731 PF12531.8 gi|407464265|ref|YP_006775147.1| - 0.075 12.8 0.9 0.66 9.7 0.1 2.5 2 1 1 3 3 3 0 DNA-K related protein DUF2924 PF11149.8 gi|407464265|ref|YP_006775147.1| - 2.9 8.3 5.1 0.81 10.1 1.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2924) Ral PF11058.8 gi|407464266|ref|YP_006775148.1| - 0.2 11.2 1.5 7.1 6.3 0.3 2.4 2 0 0 2 2 2 0 Antirestriction protein Ral APG6_N PF17675.1 gi|407464266|ref|YP_006775148.1| - 2.8 8.5 14.3 5.4 7.6 4.7 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region MS_channel PF00924.18 gi|407464267|ref|YP_006775149.1| - 1.4e-09 37.8 5.1 1.4e-09 37.8 5.1 1.9 1 1 1 2 2 2 1 Mechanosensitive ion channel DUF3589 PF12141.8 gi|407464267|ref|YP_006775149.1| - 0.0043 15.7 0.1 0.0055 15.3 0.1 1.1 1 0 0 1 1 1 1 Beta-mannosyltransferases Acetyltransf_1 PF00583.25 gi|407464269|ref|YP_006775151.1| - 4.3e-12 46.3 0.0 5.6e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|407464269|ref|YP_006775151.1| - 2.3e-06 27.9 0.0 3.6e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|407464269|ref|YP_006775151.1| - 5.4e-05 23.9 0.0 7.4e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|407464269|ref|YP_006775151.1| - 0.00015 21.7 0.0 0.00021 21.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|407464269|ref|YP_006775151.1| - 0.0026 17.9 0.0 0.0038 17.3 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase DUF4821 PF16092.5 gi|407464269|ref|YP_006775151.1| - 0.071 12.7 0.0 0.43 10.2 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4821) Acetyltransf_15 PF17013.5 gi|407464269|ref|YP_006775151.1| - 0.1 12.1 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Putative acetyl-transferase Aminotran_3 PF00202.21 gi|407464270|ref|YP_006775152.1| - 7.7e-80 268.5 0.0 9.7e-80 268.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Ectoine_synth PF06339.12 gi|407464271|ref|YP_006775153.1| - 4.7e-58 194.9 0.1 5.2e-58 194.7 0.1 1.0 1 0 0 1 1 1 1 Ectoine synthase Cupin_2 PF07883.11 gi|407464271|ref|YP_006775153.1| - 7.5e-05 22.4 0.1 0.00011 21.9 0.1 1.2 1 0 0 1 1 1 1 Cupin domain Pirin_C PF05726.13 gi|407464271|ref|YP_006775153.1| - 0.0035 17.7 0.0 0.0049 17.2 0.0 1.2 1 0 0 1 1 1 1 Pirin C-terminal cupin domain AraC_binding PF02311.19 gi|407464271|ref|YP_006775153.1| - 0.013 15.4 0.0 0.018 14.9 0.0 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain DUF600 PF04634.12 gi|407464271|ref|YP_006775153.1| - 0.034 14.2 0.1 0.044 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF600 Cupin_3 PF05899.12 gi|407464271|ref|YP_006775153.1| - 0.036 13.7 0.0 0.052 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF861) PhyH PF05721.13 gi|407464272|ref|YP_006775154.1| - 8.8e-31 107.8 0.0 1.1e-30 107.5 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) AsnC_trans_reg PF01037.21 gi|407464273|ref|YP_006775155.1| - 2.4e-06 27.4 0.0 2.9e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain MarR_2 PF12802.7 gi|407464275|ref|YP_006775157.1| - 5.6e-06 26.1 0.0 2.1e-05 24.3 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 gi|407464275|ref|YP_006775157.1| - 1.3e-05 25.1 0.0 3.2e-05 23.9 0.0 1.5 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|407464275|ref|YP_006775157.1| - 2.5e-05 24.0 0.3 5.8e-05 22.9 0.3 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|407464275|ref|YP_006775157.1| - 4.3e-05 23.4 2.0 4.5e-05 23.4 0.0 2.0 3 0 0 3 3 3 1 Winged helix-turn-helix HTH_11 PF08279.12 gi|407464275|ref|YP_006775157.1| - 0.00031 20.6 0.1 0.00094 19.1 0.0 1.8 2 0 0 2 2 2 1 HTH domain TrmB PF01978.19 gi|407464275|ref|YP_006775157.1| - 0.002 18.0 0.1 0.0078 16.1 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Val_tRNA-synt_C PF10458.9 gi|407464275|ref|YP_006775157.1| - 0.0049 17.1 0.0 0.011 16.0 0.0 1.5 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm Fe_dep_repress PF01325.19 gi|407464275|ref|YP_006775157.1| - 0.0091 16.2 0.0 0.032 14.4 0.0 2.0 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|407464275|ref|YP_006775157.1| - 0.0096 16.4 0.0 0.022 15.2 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|407464275|ref|YP_006775157.1| - 0.013 15.0 0.2 0.11 12.1 0.1 2.6 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|407464275|ref|YP_006775157.1| - 0.015 15.2 0.1 0.036 14.0 0.1 1.6 1 0 0 1 1 1 0 MarR family DUF4423 PF14394.6 gi|407464275|ref|YP_006775157.1| - 0.036 13.8 0.0 0.075 12.7 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_IclR PF09339.10 gi|407464275|ref|YP_006775157.1| - 0.055 13.3 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_39 PF14090.6 gi|407464275|ref|YP_006775157.1| - 0.063 13.0 0.0 2.4 8.0 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain zf-ribbon_3 PF13248.6 gi|407464276|ref|YP_006775158.1| - 0.0074 15.7 0.9 1.6 8.2 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.7 gi|407464276|ref|YP_006775158.1| - 0.014 15.4 0.5 0.025 14.6 0.5 1.5 1 1 0 1 1 1 0 Double zinc ribbon zf-RRPl_C4 PF17026.5 gi|407464276|ref|YP_006775158.1| - 0.022 14.9 0.4 0.065 13.4 0.3 1.7 1 1 1 2 2 2 0 Putative ribonucleoprotein zinc-finger pf C4 type Gin PF10764.9 gi|407464276|ref|YP_006775158.1| - 0.026 14.5 1.0 0.074 13.0 1.0 1.8 1 1 0 1 1 1 0 Inhibitor of sigma-G Gin IBR PF01485.21 gi|407464276|ref|YP_006775158.1| - 0.034 14.4 1.5 2.1 8.6 0.0 2.1 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain TF_Zn_Ribbon PF08271.12 gi|407464276|ref|YP_006775158.1| - 0.043 13.3 2.3 0.16 11.5 2.3 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|407464276|ref|YP_006775158.1| - 0.048 13.6 0.4 0.068 13.1 0.4 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_9 PF14369.6 gi|407464276|ref|YP_006775158.1| - 0.11 12.7 2.1 8.7 6.7 0.1 2.3 1 1 1 2 2 2 0 zinc-ribbon zinc_ribbon_2 PF13240.6 gi|407464276|ref|YP_006775158.1| - 0.21 11.4 3.3 2.2 8.1 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-HIT PF04438.16 gi|407464277|ref|YP_006775159.1| - 0.031 14.1 9.7 0.032 14.1 4.5 2.2 2 0 0 2 2 2 0 HIT zinc finger PolC_DP2 PF03833.13 gi|407464277|ref|YP_006775159.1| - 0.45 8.3 4.9 0.44 8.3 4.9 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 RecR PF02132.15 gi|407464277|ref|YP_006775159.1| - 2.2 7.9 9.6 0.17 11.5 2.5 2.2 2 0 0 2 2 2 0 RecR protein HTH_20 PF12840.7 gi|407464278|ref|YP_006775160.1| - 1.6e-05 24.9 0.0 3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4423 PF14394.6 gi|407464278|ref|YP_006775160.1| - 8.1e-05 22.4 0.0 0.00017 21.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) MarR_2 PF12802.7 gi|407464278|ref|YP_006775160.1| - 0.0001 22.1 0.0 0.00058 19.7 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|407464278|ref|YP_006775160.1| - 0.00051 19.5 0.2 0.0041 16.6 0.1 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|407464278|ref|YP_006775160.1| - 0.00091 19.2 0.2 0.0032 17.4 0.1 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|407464278|ref|YP_006775160.1| - 0.0012 18.6 0.1 0.0041 16.9 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|407464278|ref|YP_006775160.1| - 0.0017 18.3 0.5 0.035 14.0 0.1 2.3 2 0 0 2 2 2 1 MarR family HTH_45 PF14947.6 gi|407464278|ref|YP_006775160.1| - 0.0033 17.4 0.5 0.02 14.9 0.1 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DUF1724 PF08350.10 gi|407464278|ref|YP_006775160.1| - 0.028 14.6 0.2 0.056 13.6 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1724) HTH_11 PF08279.12 gi|407464278|ref|YP_006775160.1| - 0.035 14.0 0.1 0.069 13.1 0.1 1.4 1 0 0 1 1 1 0 HTH domain DUF2250 PF10007.9 gi|407464278|ref|YP_006775160.1| - 0.046 13.8 0.3 1.1 9.4 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) TrmB PF01978.19 gi|407464278|ref|YP_006775160.1| - 0.078 12.9 0.1 0.47 10.4 0.0 2.2 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Usp PF00582.26 gi|407464280|ref|YP_006775162.1| - 1.6e-12 48.1 0.0 2.1e-12 47.8 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family HTH_45 PF14947.6 gi|407464281|ref|YP_006775163.1| - 0.00017 21.5 0.3 0.00027 20.9 0.3 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4738 PF15889.5 gi|407464281|ref|YP_006775163.1| - 0.062 13.1 0.0 0.089 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4738) CdiI_4 PF18624.1 gi|407464282|ref|YP_006775164.1| - 0.025 15.0 0.0 0.045 14.2 0.0 1.3 1 0 0 1 1 1 0 CDI immunity protein DUF4110 PF13422.6 gi|407464284|ref|YP_006775166.1| - 0.059 13.4 2.9 4 7.6 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4110) HCNGP PF07818.13 gi|407464285|ref|YP_006775167.1| - 0.053 14.2 3.0 0.056 14.1 1.5 1.9 1 1 1 2 2 2 0 HCNGP-like protein HSP20 PF00011.21 gi|407464286|ref|YP_006775168.1| - 2.9e-11 43.4 1.0 3.8e-10 39.8 1.0 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|407464286|ref|YP_006775168.1| - 1.5e-10 40.5 0.0 2.2e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA PIH1_CS PF18201.1 gi|407464286|ref|YP_006775168.1| - 5.4e-06 26.7 0.2 7.9e-06 26.2 0.2 1.2 1 0 0 1 1 1 1 PIH1 CS-like domain zinc-ribbons_6 PF07191.12 gi|407464287|ref|YP_006775169.1| - 0.13 12.2 10.6 0.21 11.6 9.2 1.9 1 1 1 2 2 2 0 zinc-ribbons DZR PF12773.7 gi|407464287|ref|YP_006775169.1| - 0.14 12.2 10.9 0.37 10.8 10.9 1.9 1 1 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 gi|407464287|ref|YP_006775169.1| - 0.35 10.9 7.8 2.5 8.2 7.8 2.0 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PolC_DP2 PF03833.13 gi|407464287|ref|YP_006775169.1| - 0.4 8.5 5.2 0.41 8.5 5.2 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Nudix_N_2 PF14803.6 gi|407464287|ref|YP_006775169.1| - 1.1 9.3 8.6 1.7 8.6 6.7 2.5 1 1 1 2 2 2 0 Nudix N-terminal Zn-ribbon_8 PF09723.10 gi|407464287|ref|YP_006775169.1| - 5.4 7.2 9.7 2 8.6 0.6 2.7 1 1 2 3 3 3 0 Zinc ribbon domain DUF302 PF03625.14 gi|407464289|ref|YP_006775171.1| - 9e-19 67.1 0.0 1.4e-18 66.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF302 DUF1128 PF06569.11 gi|407464289|ref|YP_006775171.1| - 0.019 15.0 0.5 0.1 12.6 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1128) FUR PF01475.19 gi|407464291|ref|YP_006775173.1| - 3.2e-32 111.2 0.5 4e-32 110.9 0.5 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family zf-B_box PF00643.24 gi|407464291|ref|YP_006775173.1| - 0.02 15.1 2.1 2.3 8.4 0.1 2.2 2 0 0 2 2 2 0 B-box zinc finger Penicillinase_R PF03965.16 gi|407464291|ref|YP_006775173.1| - 0.07 13.5 0.1 0.11 12.9 0.1 1.3 1 0 0 1 1 1 0 Penicillinase repressor HTH_32 PF13565.6 gi|407464291|ref|YP_006775173.1| - 0.17 12.5 0.1 0.72 10.5 0.1 2.0 1 1 0 1 1 1 0 Homeodomain-like domain HTH_20 PF12840.7 gi|407464291|ref|YP_006775173.1| - 0.17 12.0 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain zinc_ribbon_15 PF17032.5 gi|407464292|ref|YP_006775174.1| - 0.014 16.2 5.5 0.016 16.0 5.5 1.1 1 0 0 1 1 1 0 zinc-ribbon family eRF1_2 PF03464.15 gi|407464293|ref|YP_006775175.1| - 1.7e-13 51.0 1.1 1.7e-13 51.0 1.1 2.4 3 0 0 3 3 3 1 eRF1 domain 2 baeRF_family10 PF18854.1 gi|407464293|ref|YP_006775175.1| - 7.7e-11 42.4 0.0 1.4e-10 41.5 0.0 1.5 1 1 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 acVLRF1 PF18859.1 gi|407464293|ref|YP_006775175.1| - 2.3e-09 37.6 0.0 3.4e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor eRF1_3 PF03465.15 gi|407464293|ref|YP_006775175.1| - 0.0036 17.8 0.5 0.0036 17.8 0.5 2.5 2 2 0 2 2 2 1 eRF1 domain 3 baeRF_family3 PF18845.1 gi|407464293|ref|YP_006775175.1| - 0.0039 17.5 0.0 0.0077 16.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 3 Peptidase_C3 PF00548.20 gi|407464293|ref|YP_006775175.1| - 0.046 13.6 1.5 0.094 12.6 1.5 1.5 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) Cdh1_DBD_1 PF18196.1 gi|407464293|ref|YP_006775175.1| - 0.058 13.7 4.6 3.5 8.0 0.6 2.9 3 1 0 3 3 3 0 Chromodomain helicase DNA-binding domain 1 DAO PF01266.24 gi|407464294|ref|YP_006775176.1| - 5e-41 141.4 0.0 8.8e-41 140.6 0.0 1.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase Mqo PF06039.15 gi|407464294|ref|YP_006775176.1| - 1.4e-10 40.3 0.0 0.00015 20.5 0.0 2.4 2 1 0 2 2 2 2 Malate:quinone oxidoreductase (Mqo) Pyr_redox_2 PF07992.14 gi|407464294|ref|YP_006775176.1| - 1.2e-05 24.7 0.0 0.085 12.1 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|407464294|ref|YP_006775176.1| - 1.3e-05 24.6 0.0 0.032 13.5 0.0 2.1 2 0 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 gi|407464294|ref|YP_006775176.1| - 0.0021 18.3 0.0 0.0052 17.0 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|407464294|ref|YP_006775176.1| - 0.0033 16.7 0.0 0.0054 16.0 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 gi|407464294|ref|YP_006775176.1| - 0.0096 16.5 0.1 3.2 8.4 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|407464294|ref|YP_006775176.1| - 0.016 14.1 0.2 0.34 9.7 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|407464294|ref|YP_006775176.1| - 0.053 12.6 0.0 0.61 9.1 0.0 2.0 2 0 0 2 2 2 0 Lycopene cyclase protein CBS PF00571.28 gi|407464295|ref|YP_006775177.1| - 2e-05 25.0 1.1 1.4 9.4 0.0 3.8 4 0 0 4 4 4 2 CBS domain EPO_TPO PF00758.18 gi|407464295|ref|YP_006775177.1| - 0.029 14.4 0.1 0.055 13.5 0.1 1.4 1 0 0 1 1 1 0 Erythropoietin/thrombopoietin ChuX_HutX PF06228.13 gi|407464297|ref|YP_006775179.1| - 8.5e-11 41.8 0.0 1.1e-10 41.5 0.0 1.1 1 0 0 1 1 1 1 Haem utilisation ChuX/HutX HemS PF05171.12 gi|407464297|ref|YP_006775179.1| - 1.2e-09 38.2 0.0 1.2e-09 38.2 0.0 1.1 1 0 0 1 1 1 1 Haemin-degrading HemS.ChuX domain 2-Hacid_dh_C PF02826.19 gi|407464298|ref|YP_006775180.1| - 3e-62 209.1 0.0 4.2e-62 208.7 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|407464298|ref|YP_006775180.1| - 1.3e-30 105.7 0.0 1.5e-30 105.6 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|407464298|ref|YP_006775180.1| - 3.7e-09 37.0 0.0 7.2e-09 36.0 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|407464298|ref|YP_006775180.1| - 3.7e-06 26.6 0.2 8.1e-06 25.5 0.1 1.6 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain F420_oxidored PF03807.17 gi|407464298|ref|YP_006775180.1| - 0.0021 18.6 0.0 0.0056 17.2 0.0 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent EVE PF01878.18 gi|407464298|ref|YP_006775180.1| - 0.036 14.1 0.1 0.068 13.2 0.1 1.5 1 0 0 1 1 1 0 EVE domain NAD_binding_7 PF13241.6 gi|407464298|ref|YP_006775180.1| - 0.092 13.2 0.1 0.2 12.1 0.1 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding zf-ribbon_3 PF13248.6 gi|407464299|ref|YP_006775181.1| - 0.0062 15.9 7.5 0.01 15.2 7.5 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|407464299|ref|YP_006775181.1| - 0.08 12.7 8.8 0.16 11.8 8.8 1.5 1 0 0 1 1 1 0 zinc-ribbon domain POR_N PF01855.19 gi|407464300|ref|YP_006775182.1| - 1.8e-57 194.7 0.0 2.7e-57 194.2 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|407464300|ref|YP_006775182.1| - 8.7e-30 104.1 0.0 1.6e-29 103.2 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|407464300|ref|YP_006775182.1| - 9.9e-13 48.3 0.0 1.9e-12 47.4 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|407464300|ref|YP_006775182.1| - 2.5e-05 24.1 0.0 0.0001 22.1 0.0 2.0 2 0 0 2 2 2 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|407464300|ref|YP_006775182.1| - 0.0012 18.5 0.0 0.002 17.7 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|407464301|ref|YP_006775183.1| - 4e-29 101.4 0.2 7.1e-29 100.6 0.2 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|407464301|ref|YP_006775183.1| - 3.3e-16 59.2 0.4 9.3e-15 54.5 0.4 2.4 1 1 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal Glyco_hydro_42C PF08533.10 gi|407464303|ref|YP_006775185.1| - 0.082 12.6 0.6 0.28 10.9 0.0 2.1 3 0 0 3 3 3 0 Beta-galactosidase C-terminal domain F420_ligase PF01996.16 gi|407464306|ref|YP_006775188.1| - 5.2e-43 147.2 0.1 6.6e-43 146.8 0.1 1.1 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Nucleoporin_C PF03177.14 gi|407464306|ref|YP_006775188.1| - 0.095 11.4 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Non-repetitive/WGA-negative nucleoporin C-terminal Aconitase PF00330.20 gi|407464307|ref|YP_006775189.1| - 1.4e-91 307.8 2.1 1.1e-89 301.5 2.1 2.0 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) GRDA PF04723.14 gi|407464307|ref|YP_006775189.1| - 0.027 14.3 0.1 0.098 12.4 0.0 1.9 2 0 0 2 2 2 0 Glycine reductase complex selenoprotein A Aconitase_C PF00694.19 gi|407464308|ref|YP_006775190.1| - 4.3e-21 75.6 0.0 2.2e-20 73.3 0.0 2.0 1 1 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|407464308|ref|YP_006775190.1| - 0.017 14.8 0.3 0.11 12.1 0.3 2.0 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus Aconitase PF00330.20 gi|407464309|ref|YP_006775191.1| - 9.4e-153 509.5 0.0 1.1e-152 509.3 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|407464310|ref|YP_006775192.1| - 2.8e-36 124.7 0.0 4.7e-36 124.0 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|407464310|ref|YP_006775192.1| - 0.0015 18.2 0.1 0.065 12.8 0.1 2.2 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus FAD_syn PF06574.12 gi|407464310|ref|YP_006775192.1| - 0.035 14.0 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 FAD synthetase BET PF17035.5 gi|407464310|ref|YP_006775192.1| - 0.051 13.7 0.7 0.27 11.5 0.3 2.2 2 1 0 2 2 2 0 Bromodomain extra-terminal - transcription regulation NTP_transferase PF00483.23 gi|407464311|ref|YP_006775193.1| - 1.2e-19 70.9 0.1 1.5e-19 70.6 0.1 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|407464311|ref|YP_006775193.1| - 4.3e-12 46.7 0.0 4.9e-12 46.5 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|407464311|ref|YP_006775193.1| - 0.0031 17.5 0.1 0.0083 16.1 0.0 1.7 2 0 0 2 2 2 1 Cytidylyltransferase IspD PF01128.19 gi|407464311|ref|YP_006775193.1| - 0.025 14.3 0.0 0.033 13.9 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ribosomal_S9 PF00380.19 gi|407464312|ref|YP_006775194.1| - 1e-34 119.6 0.3 1.2e-34 119.4 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.18 gi|407464313|ref|YP_006775195.1| - 3e-11 43.7 1.1 1.9e-09 37.9 1.1 2.2 1 1 0 1 1 1 1 Ribosomal protein L13 Adhesin_E PF16747.5 gi|407464313|ref|YP_006775195.1| - 0.065 13.3 0.3 0.95 9.5 0.1 2.1 1 1 1 2 2 2 0 Surface-adhesin protein E Ribosomal_L18 PF17135.4 gi|407464314|ref|YP_006775196.1| - 5.4e-07 29.2 0.0 5.9e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|407464314|ref|YP_006775196.1| - 0.00019 22.1 0.5 0.00028 21.6 0.5 1.4 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RNA_pol_A_bac PF01000.26 gi|407464315|ref|YP_006775197.1| - 2.1e-25 89.3 0.0 3.6e-25 88.5 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|407464315|ref|YP_006775197.1| - 6e-12 44.8 0.0 7.4e-12 44.5 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain DUF2401 PF10287.9 gi|407464315|ref|YP_006775197.1| - 0.11 12.0 0.1 0.17 11.4 0.1 1.2 1 0 0 1 1 1 0 Putative TOS1-like glycosyl hydrolase (DUF2401) SBDS PF01172.18 gi|407464317|ref|YP_006775199.1| - 1.4e-22 79.5 0.5 2.6e-22 78.7 0.0 1.7 2 0 0 2 2 2 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|407464317|ref|YP_006775199.1| - 1.7e-18 66.7 0.3 2.5e-18 66.2 0.3 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 gi|407464317|ref|YP_006775199.1| - 0.019 15.0 0.0 0.041 13.9 0.0 1.5 1 0 0 1 1 1 0 Elongation factor G C-terminus KH_1 PF00013.29 gi|407464318|ref|YP_006775200.1| - 3e-07 30.1 0.2 6.7e-07 29.1 0.2 1.5 1 0 0 1 1 1 1 KH domain KH_6 PF15985.5 gi|407464318|ref|YP_006775200.1| - 3.6e-06 27.2 0.0 6e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 gi|407464318|ref|YP_006775200.1| - 0.0002 21.1 0.0 0.00047 19.9 0.0 1.6 1 0 0 1 1 1 1 KH domain KH_4 PF13083.6 gi|407464318|ref|YP_006775200.1| - 0.0043 16.9 0.1 0.015 15.2 0.0 1.9 2 0 0 2 2 2 1 KH domain DAP3 PF10236.9 gi|407464318|ref|YP_006775200.1| - 0.14 11.3 0.0 0.2 10.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 RNase_PH PF01138.21 gi|407464319|ref|YP_006775201.1| - 5.2e-35 120.8 0.0 7e-35 120.4 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|407464319|ref|YP_006775201.1| - 1.2e-13 50.8 0.3 2.7e-13 49.7 0.3 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.21 gi|407464320|ref|YP_006775202.1| - 3.4e-23 82.6 0.0 5.4e-23 81.9 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|407464320|ref|YP_006775202.1| - 3.4e-14 52.6 0.1 1.3e-13 50.7 0.1 2.0 2 0 0 2 2 2 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.19 gi|407464321|ref|YP_006775203.1| - 9e-20 70.6 2.8 9.4e-20 70.5 2.8 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|407464321|ref|YP_006775203.1| - 0.00016 21.6 2.5 0.00016 21.6 2.5 1.5 2 0 0 2 2 2 1 Transposase zinc-ribbon domain C1_1 PF00130.22 gi|407464321|ref|YP_006775203.1| - 0.0017 18.2 1.5 0.0025 17.7 1.5 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) DZR PF12773.7 gi|407464321|ref|YP_006775203.1| - 0.042 13.9 1.8 0.079 13.0 1.8 1.4 1 1 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|407464321|ref|YP_006775203.1| - 0.056 13.0 1.9 0.11 12.0 1.9 1.5 1 1 0 1 1 1 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 gi|407464321|ref|YP_006775203.1| - 0.087 12.9 0.4 0.087 12.9 0.4 2.0 1 1 1 2 2 2 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|407464321|ref|YP_006775203.1| - 0.11 12.4 3.7 0.3 11.0 3.7 1.8 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|407464321|ref|YP_006775203.1| - 0.13 11.7 0.1 0.13 11.7 0.1 2.0 2 0 0 2 2 2 0 zinc-ribbon domain zf_C2H2_10 PF18414.1 gi|407464321|ref|YP_006775203.1| - 0.5 9.9 3.0 3.8 7.1 0.2 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger zf-C2H2_3 PF13878.6 gi|407464321|ref|YP_006775203.1| - 0.66 9.9 3.7 5 7.0 0.5 2.3 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO Pcc1 PF09341.10 gi|407464322|ref|YP_006775204.1| - 3.3e-06 27.1 0.0 3.4e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 Prefoldin_2 PF01920.20 gi|407464323|ref|YP_006775205.1| - 1.1e-20 73.6 22.7 1.2e-20 73.4 22.7 1.0 1 0 0 1 1 1 1 Prefoldin subunit DUF4050 PF13259.6 gi|407464323|ref|YP_006775205.1| - 0.07 13.4 2.8 0.086 13.2 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) KIP1 PF07765.12 gi|407464323|ref|YP_006775205.1| - 0.12 12.6 16.3 0.4 10.8 2.9 3.0 1 1 2 3 3 3 0 KIP1-like protein Sld5 PF05916.11 gi|407464323|ref|YP_006775205.1| - 0.23 11.9 4.5 0.39 11.2 4.5 1.4 1 1 0 1 1 1 0 GINS complex protein TPR_MLP1_2 PF07926.12 gi|407464323|ref|YP_006775205.1| - 0.96 9.5 18.8 2.8 8.0 5.0 2.2 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein YlqD PF11068.8 gi|407464323|ref|YP_006775205.1| - 1.2 9.6 19.1 1.9 8.9 5.7 2.0 1 1 1 2 2 2 0 YlqD protein NEMP PF10225.9 gi|407464323|ref|YP_006775205.1| - 1.5 8.4 3.8 2.2 7.9 3.9 1.5 1 1 0 1 1 1 0 NEMP family DUF4795 PF16043.5 gi|407464323|ref|YP_006775205.1| - 8.1 6.0 18.0 28 4.2 18.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) ERCC4 PF02732.15 gi|407464324|ref|YP_006775206.1| - 1.2e-23 84.0 0.0 1.9e-23 83.4 0.0 1.3 1 0 0 1 1 1 1 ERCC4 domain HHH_5 PF14520.6 gi|407464324|ref|YP_006775206.1| - 1.6e-08 35.0 0.1 4.4e-08 33.6 0.0 1.8 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|407464324|ref|YP_006775206.1| - 3e-05 24.0 0.0 0.00019 21.5 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH PF00633.23 gi|407464324|ref|YP_006775206.1| - 0.00032 20.4 0.1 0.024 14.5 0.1 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|407464324|ref|YP_006775206.1| - 0.0037 17.5 0.0 0.17 12.1 0.0 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 gi|407464324|ref|YP_006775206.1| - 0.037 14.6 0.1 0.13 12.9 0.1 1.9 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold PIN_6 PF17146.4 gi|407464325|ref|YP_006775207.1| - 2e-16 60.2 0.0 3e-16 59.7 0.0 1.2 1 0 0 1 1 1 1 PIN domain of ribonuclease PIN_5 PF08745.11 gi|407464325|ref|YP_006775207.1| - 1.8e-05 24.2 0.0 0.00091 18.7 0.0 2.1 2 0 0 2 2 2 1 PINc domain ribonuclease PIN PF01850.21 gi|407464325|ref|YP_006775207.1| - 5e-05 23.8 0.1 8.5e-05 23.1 0.1 1.4 1 1 0 1 1 1 1 PIN domain zf-LITAF-like PF10601.9 gi|407464325|ref|YP_006775207.1| - 0.015 15.5 1.3 0.58 10.5 0.1 2.3 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain zf-ACC PF17848.1 gi|407464325|ref|YP_006775207.1| - 0.052 13.6 2.0 0.21 11.7 0.1 2.3 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Zn_ribbon_SprT PF17283.2 gi|407464325|ref|YP_006775207.1| - 0.056 13.4 3.2 0.51 10.3 1.2 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain tRNA-synt_1g PF09334.11 gi|407464325|ref|YP_006775207.1| - 0.19 10.4 0.2 0.31 9.7 0.2 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (M) zinc_ribbon_5 PF13719.6 gi|407464325|ref|YP_006775207.1| - 4 7.3 8.9 5.1 6.9 0.1 3.5 3 1 0 3 3 3 0 zinc-ribbon domain NAD_kinase PF01513.21 gi|407464326|ref|YP_006775208.1| - 2.3e-34 118.9 0.8 4.1e-34 118.1 0.8 1.4 1 1 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|407464326|ref|YP_006775208.1| - 8.5e-07 28.6 0.1 1.5e-06 27.8 0.1 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain CoA_binding_2 PF13380.6 gi|407464326|ref|YP_006775208.1| - 0.025 15.1 0.0 0.048 14.2 0.0 1.5 1 0 0 1 1 1 0 CoA binding domain Rhodanese PF00581.20 gi|407464327|ref|YP_006775209.1| - 2.2e-34 118.2 0.1 1.3e-18 67.4 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain DUF1366 PF07104.11 gi|407464328|ref|YP_006775210.1| - 0.042 13.6 0.0 0.055 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1366) Fer4 PF00037.27 gi|407464329|ref|YP_006775211.1| - 5.5e-08 32.3 16.0 0.00016 21.3 3.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|407464329|ref|YP_006775211.1| - 1.2e-05 25.8 4.4 7.7e-05 23.2 5.3 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|407464329|ref|YP_006775211.1| - 2.5e-05 24.4 3.2 4.9e-05 23.4 3.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|407464329|ref|YP_006775211.1| - 0.00012 22.1 6.6 0.00032 20.8 6.5 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|407464329|ref|YP_006775211.1| - 0.00026 21.0 3.3 0.00045 20.3 3.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|407464329|ref|YP_006775211.1| - 0.00097 19.2 0.4 0.002 18.3 0.4 1.5 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_6 PF12837.7 gi|407464329|ref|YP_006775211.1| - 0.0036 17.3 13.1 0.005 16.9 1.6 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Tenui_PVC2 PF06656.11 gi|407464329|ref|YP_006775211.1| - 0.0061 14.5 0.1 0.0085 14.1 0.1 1.1 1 0 0 1 1 1 1 Tenuivirus PVC2 protein Fer4_17 PF13534.6 gi|407464329|ref|YP_006775211.1| - 0.021 15.3 1.6 9.5 6.9 0.0 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|407464329|ref|YP_006775211.1| - 0.24 11.9 5.2 5.6 7.5 6.1 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Me-amine-dh_L PF02975.14 gi|407464329|ref|YP_006775211.1| - 0.3 11.6 2.8 0.52 10.8 2.8 1.3 1 0 0 1 1 1 0 Methylamine dehydrogenase, L chain Fer4_16 PF13484.6 gi|407464329|ref|YP_006775211.1| - 0.32 12.0 8.6 3 8.8 2.7 2.7 1 1 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|407464329|ref|YP_006775211.1| - 2.5 8.4 9.4 4.9 7.5 0.4 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|407464329|ref|YP_006775211.1| - 2.5 8.7 9.5 0.57 10.8 0.6 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|407464329|ref|YP_006775211.1| - 2.9 9.1 14.2 11 7.2 5.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|407464329|ref|YP_006775211.1| - 2.9 8.1 4.8 7.1 6.9 0.4 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Glyco_tranf_2_3 PF13641.6 gi|407464330|ref|YP_006775212.1| - 3.1e-28 99.2 0.0 8.1e-28 97.9 0.0 1.6 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|407464330|ref|YP_006775212.1| - 2.1e-22 80.0 0.4 2.1e-22 80.0 0.4 2.2 3 0 0 3 3 3 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.26 gi|407464330|ref|YP_006775212.1| - 1.4e-20 73.8 0.1 3e-20 72.7 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|407464330|ref|YP_006775212.1| - 1.7e-14 53.7 0.1 2.9e-14 52.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|407464330|ref|YP_006775212.1| - 0.003 18.0 0.4 0.011 16.2 0.4 2.0 1 0 0 1 1 1 1 Glycosyl transferase family 2 Cellulose_synt PF03552.14 gi|407464330|ref|YP_006775212.1| - 0.0038 15.8 1.6 0.015 13.8 0.1 2.1 2 0 0 2 2 2 1 Cellulose synthase Anp1 PF03452.14 gi|407464330|ref|YP_006775212.1| - 0.1 12.0 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Anp1 Chitin_synth_2 PF03142.15 gi|407464330|ref|YP_006775212.1| - 0.14 10.7 2.4 3.4 6.2 0.9 2.2 2 0 0 2 2 2 0 Chitin synthase DUF948 PF06103.11 gi|407464331|ref|YP_006775213.1| - 1.6e-05 25.1 22.6 0.81 10.0 5.0 5.5 2 1 2 6 6 5 4 Bacterial protein of unknown function (DUF948) Sec34 PF04136.15 gi|407464331|ref|YP_006775213.1| - 0.00011 22.1 33.3 0.021 14.7 3.8 6.1 2 1 5 8 8 8 3 Sec34-like family DUF1664 PF07889.12 gi|407464331|ref|YP_006775213.1| - 0.00035 20.6 37.9 0.054 13.5 1.9 5.1 2 1 3 5 5 4 3 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 gi|407464331|ref|YP_006775213.1| - 0.00057 20.1 37.7 0.65 10.3 0.1 6.8 1 1 8 9 9 9 4 Biogenesis of lysosome-related organelles complex-1 subunit 2 NPV_P10 PF05531.12 gi|407464331|ref|YP_006775213.1| - 0.00084 19.8 33.6 0.29 11.6 0.9 6.8 1 1 5 6 6 6 3 Nucleopolyhedrovirus P10 protein EzrA PF06160.12 gi|407464331|ref|YP_006775213.1| - 0.0018 16.5 32.0 0.11 10.6 31.1 3.0 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA DHR10 PF18595.1 gi|407464331|ref|YP_006775213.1| - 0.004 17.2 29.4 0.04 14.0 0.1 4.8 2 2 1 4 4 4 2 Designed helical repeat protein 10 domain CENP-Q PF13094.6 gi|407464331|ref|YP_006775213.1| - 0.0046 17.2 10.7 0.0046 17.2 10.7 3.4 2 1 1 3 3 3 1 CENP-Q, a CENPA-CAD centromere complex subunit SesA PF17107.5 gi|407464331|ref|YP_006775213.1| - 0.0086 16.3 6.3 0.0086 16.3 6.3 5.2 1 1 3 5 5 5 1 N-terminal domain on NACHT_NTPase and P-loop NTPases Laminin_II PF06009.12 gi|407464331|ref|YP_006775213.1| - 0.01 15.9 38.6 1.2 9.1 4.4 4.6 1 1 3 4 4 4 0 Laminin Domain II NAS PF03059.16 gi|407464331|ref|YP_006775213.1| - 0.016 14.6 1.5 0.016 14.6 1.5 2.1 2 0 0 2 2 2 0 Nicotianamine synthase protein MCPsignal PF00015.21 gi|407464331|ref|YP_006775213.1| - 0.019 14.8 37.8 0.45 10.3 1.5 5.3 1 1 4 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF1192 PF06698.11 gi|407464331|ref|YP_006775213.1| - 0.021 14.9 2.6 7 6.8 0.1 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1192) KxDL PF10241.9 gi|407464331|ref|YP_006775213.1| - 0.11 12.8 31.4 0.43 10.9 0.7 6.4 4 2 2 6 6 6 0 Uncharacterized conserved protein RPW8 PF05659.11 gi|407464331|ref|YP_006775213.1| - 0.12 12.1 23.0 1.1 8.9 0.1 5.8 1 1 4 6 6 6 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Fzo_mitofusin PF04799.13 gi|407464331|ref|YP_006775213.1| - 0.2 11.2 30.9 8.2 6.0 0.1 5.9 1 1 5 6 6 6 0 fzo-like conserved region eIF3_N PF09440.10 gi|407464331|ref|YP_006775213.1| - 0.27 11.7 27.3 0.82 10.1 3.8 4.4 2 2 2 4 4 4 0 eIF3 subunit 6 N terminal domain DUF16 PF01519.16 gi|407464331|ref|YP_006775213.1| - 0.35 11.4 35.7 0.26 11.8 0.4 5.0 2 1 2 4 4 4 0 Protein of unknown function DUF16 ATG16 PF08614.11 gi|407464331|ref|YP_006775213.1| - 0.38 11.0 29.2 0.19 11.9 3.7 3.4 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) HrpB7 PF09486.10 gi|407464331|ref|YP_006775213.1| - 0.39 11.1 6.2 10 6.5 2.8 3.7 3 2 1 4 4 4 0 Bacterial type III secretion protein (HrpB7) DUF2756 PF10956.8 gi|407464331|ref|YP_006775213.1| - 1 9.9 7.7 2.5 8.7 7.7 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2756) Allexi_40kDa PF05549.11 gi|407464331|ref|YP_006775213.1| - 1.4 8.4 30.9 0.63 9.5 9.6 4.4 1 1 4 5 5 5 0 Allexivirus 40kDa protein HSBP1 PF06825.12 gi|407464331|ref|YP_006775213.1| - 2 8.3 22.5 2.1 8.3 0.1 6.1 5 2 1 7 7 6 0 Heat shock factor binding protein 1 Occludin_ELL PF07303.13 gi|407464331|ref|YP_006775213.1| - 2.5 8.9 22.4 14 6.5 4.3 5.2 2 2 2 4 4 4 0 Occludin homology domain HD_4 PF13328.6 gi|407464331|ref|YP_006775213.1| - 3 7.5 6.3 1.5 8.6 2.2 2.5 2 1 1 3 3 3 0 HD domain SlyX PF04102.12 gi|407464331|ref|YP_006775213.1| - 3.8 8.2 20.6 25 5.6 0.2 6.3 2 1 5 7 7 7 0 SlyX CHDCT2 PF08074.11 gi|407464331|ref|YP_006775213.1| - 4.1 7.5 19.1 1.9 8.7 0.7 3.6 2 1 1 3 3 3 0 CHDCT2 (NUC038) domain YojJ PF10372.9 gi|407464331|ref|YP_006775213.1| - 5.6 7.1 22.1 3.3 7.9 0.6 6.1 3 2 2 6 6 6 0 Bacterial membrane-spanning protein N-terminus Na_H_Exchanger PF00999.21 gi|407464332|ref|YP_006775214.1| - 1.4e-50 172.3 56.5 1.7e-50 171.9 56.5 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Spore_YabQ PF09578.10 gi|407464332|ref|YP_006775214.1| - 6e-05 23.2 0.2 6e-05 23.2 0.2 5.0 5 1 0 5 5 5 1 Spore cortex protein YabQ (Spore_YabQ) DUF1492 PF07374.11 gi|407464334|ref|YP_006775216.1| - 0.15 12.3 1.3 0.17 12.1 0.4 1.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1492) Ribosomal_L16 PF00252.18 gi|407464335|ref|YP_006775217.1| - 5.3e-26 91.2 0.4 6.6e-26 90.9 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e PYNP_C PF07831.13 gi|407464335|ref|YP_006775217.1| - 0.0025 17.4 0.0 0.0046 16.6 0.0 1.4 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain tRNA_int_endo PF01974.17 gi|407464336|ref|YP_006775218.1| - 7.6e-21 74.0 0.3 1.3e-20 73.2 0.1 1.5 2 0 0 2 2 2 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|407464336|ref|YP_006775218.1| - 6.6e-14 51.3 2.9 4e-12 45.6 0.3 2.5 2 0 0 2 2 2 2 tRNA intron endonuclease, N-terminal domain Acetyltransf_1 PF00583.25 gi|407464338|ref|YP_006775220.1| - 3.5e-14 53.0 0.0 4.1e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|407464338|ref|YP_006775220.1| - 5.5e-10 39.3 0.0 7.2e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|407464338|ref|YP_006775220.1| - 2e-09 37.8 0.1 2.8e-09 37.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|407464338|ref|YP_006775220.1| - 1.2e-05 25.5 0.0 1.5e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|407464338|ref|YP_006775220.1| - 0.0082 16.2 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|407464338|ref|YP_006775220.1| - 0.15 12.1 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein Metallothio PF00131.20 gi|407464340|ref|YP_006775222.1| - 0.0036 17.4 15.4 0.0036 17.4 15.4 1.9 1 1 1 2 2 2 1 Metallothionein TPR_1 PF00515.28 gi|407464342|ref|YP_006775224.1| - 1.7e-11 43.4 0.3 0.0001 22.0 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407464342|ref|YP_006775224.1| - 2.2e-10 39.9 0.1 0.0025 17.8 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407464342|ref|YP_006775224.1| - 1.7e-09 38.0 0.1 1.1e-07 32.2 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407464342|ref|YP_006775224.1| - 1.9e-08 33.9 0.0 0.01 15.9 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407464342|ref|YP_006775224.1| - 3.4e-08 33.6 0.0 0.0061 17.3 0.0 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|407464342|ref|YP_006775224.1| - 9.6e-08 32.1 0.2 0.00083 19.5 0.0 1.8 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|407464342|ref|YP_006775224.1| - 7.9e-06 25.6 0.1 0.85 9.8 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|407464342|ref|YP_006775224.1| - 8.4e-05 22.6 0.8 0.0032 17.5 0.2 2.8 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TPR_17 PF13431.6 gi|407464342|ref|YP_006775224.1| - 0.0037 17.5 0.1 3.8 8.1 0.1 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407464342|ref|YP_006775224.1| - 0.0045 17.3 0.1 0.73 10.2 0.0 3.1 2 2 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|407464342|ref|YP_006775224.1| - 0.0045 16.6 0.1 4.6 7.0 0.0 3.1 3 0 0 3 3 3 1 TPR repeat TPR_15 PF13429.6 gi|407464342|ref|YP_006775224.1| - 0.0065 15.7 0.0 2.2 7.4 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|407464342|ref|YP_006775224.1| - 0.016 15.9 0.0 0.23 12.1 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat HTH_Tnp_Tc5 PF03221.16 gi|407464343|ref|YP_006775225.1| - 0.058 13.4 0.0 0.089 12.8 0.0 1.3 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain CSTF2_hinge PF14327.6 gi|407464343|ref|YP_006775225.1| - 0.06 13.8 0.2 0.11 13.0 0.2 1.3 1 0 0 1 1 1 0 Hinge domain of cleavage stimulation factor subunit 2 Glyco_transf_90 PF05686.12 gi|407464344|ref|YP_006775226.1| - 0.058 12.3 0.1 0.075 11.9 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 90 Beta_propel PF09826.9 gi|407464345|ref|YP_006775227.1| - 1.6e-151 505.7 17.0 1.9e-151 505.5 17.0 1.0 1 0 0 1 1 1 1 Beta propeller domain LVIVD PF08309.11 gi|407464345|ref|YP_006775227.1| - 0.026 13.8 2.8 2.4 7.5 0.1 3.5 3 0 0 3 3 3 0 LVIVD repeat RPA_interact_M PF14767.6 gi|407464345|ref|YP_006775227.1| - 0.87 10.2 4.6 2.7 8.6 4.6 1.8 1 0 0 1 1 1 0 Replication protein A interacting middle HTH_5 PF01022.20 gi|407464346|ref|YP_006775228.1| - 1.5e-07 31.1 0.3 3.2e-07 30.1 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|407464346|ref|YP_006775228.1| - 1.4e-06 27.7 0.3 2.7e-06 26.8 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|407464346|ref|YP_006775228.1| - 1.7e-06 28.0 0.0 2.6e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|407464346|ref|YP_006775228.1| - 9.9e-05 21.8 0.0 0.00019 20.8 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 TFIIE_alpha PF02002.17 gi|407464346|ref|YP_006775228.1| - 0.00033 20.5 0.2 0.00056 19.7 0.2 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_11 PF08279.12 gi|407464346|ref|YP_006775228.1| - 0.00077 19.4 1.5 0.0016 18.3 1.5 1.5 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|407464346|ref|YP_006775228.1| - 0.00089 19.1 0.0 0.0017 18.2 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_40 PF14493.6 gi|407464346|ref|YP_006775228.1| - 0.0011 19.4 0.9 0.0032 17.9 0.4 2.0 2 1 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|407464346|ref|YP_006775228.1| - 0.0023 17.5 0.1 0.0052 16.4 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_9 PF08221.11 gi|407464346|ref|YP_006775228.1| - 0.0041 17.2 0.1 0.011 15.8 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain MarR_2 PF12802.7 gi|407464346|ref|YP_006775228.1| - 0.0099 15.7 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 1 MarR family Trp_repressor PF01371.19 gi|407464346|ref|YP_006775228.1| - 0.037 14.2 1.5 0.18 12.0 0.6 2.6 3 1 0 3 3 3 0 Trp repressor protein Rrf2 PF02082.20 gi|407464346|ref|YP_006775228.1| - 0.066 13.6 0.2 0.14 12.6 0.2 1.5 1 0 0 1 1 1 0 Transcriptional regulator FaeA PF04703.12 gi|407464346|ref|YP_006775228.1| - 0.13 12.7 0.0 0.25 11.7 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein F420H2_quin_red PF04075.14 gi|407464347|ref|YP_006775229.1| - 1.5e-05 25.2 0.0 1.8e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 F420H(2)-dependent quinone reductase PRC PF05239.16 gi|407464348|ref|YP_006775230.1| - 1e-07 31.9 0.9 0.00062 19.8 0.1 2.3 2 0 0 2 2 2 2 PRC-barrel domain DUF2171 PF09939.9 gi|407464348|ref|YP_006775230.1| - 4.4e-05 23.7 0.7 0.016 15.4 0.2 2.2 2 0 0 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2171) ABC_tran PF00005.27 gi|407464349|ref|YP_006775231.1| - 3.1e-32 112.0 0.1 6.9e-32 110.8 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|407464349|ref|YP_006775231.1| - 1.6e-11 44.6 1.4 3.1e-07 30.5 0.1 2.4 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|407464349|ref|YP_006775231.1| - 1.5e-07 32.0 0.6 3.9e-07 30.7 0.6 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) SMC_N PF02463.19 gi|407464349|ref|YP_006775231.1| - 0.0049 16.3 0.1 0.013 14.9 0.1 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Rad17 PF03215.15 gi|407464349|ref|YP_006775231.1| - 0.0051 16.7 0.0 0.0084 16.0 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 gi|407464349|ref|YP_006775231.1| - 0.0063 16.2 0.1 0.012 15.3 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|407464349|ref|YP_006775231.1| - 0.0067 16.9 0.6 0.0067 16.9 0.6 2.7 2 1 1 3 3 3 1 AAA domain AAA_15 PF13175.6 gi|407464349|ref|YP_006775231.1| - 0.013 15.3 6.5 0.15 11.7 0.3 2.8 2 1 1 3 3 3 0 AAA ATPase domain AAA_30 PF13604.6 gi|407464349|ref|YP_006775231.1| - 0.066 12.9 0.0 0.15 11.7 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|407464349|ref|YP_006775231.1| - 0.14 11.7 0.0 0.34 10.5 0.0 1.5 2 0 0 2 2 2 0 AAA domain ABC2_membrane PF01061.24 gi|407464350|ref|YP_006775232.1| - 2.6e-34 118.5 18.6 2.6e-34 118.5 18.6 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|407464350|ref|YP_006775232.1| - 1.3e-16 60.6 30.8 1.6e-16 60.4 30.8 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|407464350|ref|YP_006775232.1| - 1.7e-05 24.3 28.0 0.00016 21.0 28.0 2.1 1 1 0 1 1 1 1 ABC-2 family transporter protein NHL PF01436.21 gi|407464351|ref|YP_006775233.1| - 4.3e-35 118.0 10.5 7e-08 32.1 0.0 6.7 6 0 0 6 6 6 6 NHL repeat HemolysinCabind PF00353.19 gi|407464351|ref|YP_006775233.1| - 2.1e-23 81.9 38.8 1.1e-08 34.9 15.2 4.0 1 1 1 3 3 3 3 RTX calcium-binding nonapeptide repeat (4 copies) DUF5128 PF17170.4 gi|407464351|ref|YP_006775233.1| - 4.1e-18 65.6 9.3 2.1e-11 43.6 2.9 2.9 2 1 1 3 3 3 2 6-bladed beta-propeller TolB_like PF15869.5 gi|407464351|ref|YP_006775233.1| - 1.1e-08 34.6 0.3 4.3e-05 22.9 0.0 2.2 2 0 0 2 2 2 2 TolB-like 6-blade propeller-like SGL PF08450.12 gi|407464351|ref|YP_006775233.1| - 7.1e-08 32.3 0.2 0.0012 18.5 0.1 3.8 2 1 2 4 4 4 2 SMP-30/Gluconolactonase/LRE-like region DUF4934 PF16288.5 gi|407464351|ref|YP_006775233.1| - 9.5e-08 31.9 1.4 5.3e-05 23.1 0.1 2.6 2 0 0 2 2 2 2 Domain of unknown function (DUF4934) Phytase-like PF13449.6 gi|407464351|ref|YP_006775233.1| - 2.3e-06 27.8 0.6 1 9.2 0.0 4.3 1 1 2 3 3 3 2 Esterase-like activity of phytase HYR PF02494.16 gi|407464351|ref|YP_006775233.1| - 0.00096 19.4 0.3 0.0079 16.5 0.1 2.3 2 0 0 2 2 2 1 HYR domain SBBP PF06739.11 gi|407464351|ref|YP_006775233.1| - 0.21 11.6 11.8 0.66 10.0 0.4 4.2 5 0 0 5 5 5 0 Beta-propeller repeat RPA PF10134.9 gi|407464352|ref|YP_006775234.1| - 0.026 14.0 0.0 0.055 12.9 0.0 1.5 1 0 0 1 1 1 0 Replication initiator protein A PhoU_div PF01865.16 gi|407464353|ref|YP_006775235.1| - 8.8e-26 90.6 12.7 1.1e-25 90.3 12.7 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 AIP3 PF03915.13 gi|407464353|ref|YP_006775235.1| - 0.003 16.7 0.6 0.0079 15.3 0.5 1.8 1 1 0 1 1 1 1 Actin interacting protein 3 PhoU PF01895.19 gi|407464353|ref|YP_006775235.1| - 0.02 15.3 12.5 0.67 10.5 4.4 2.7 2 1 0 2 2 2 0 PhoU domain SepF PF04472.12 gi|407464353|ref|YP_006775235.1| - 0.025 14.9 1.2 3.9 7.8 0.0 3.1 2 1 0 2 2 2 0 Cell division protein SepF DUF5343 PF17278.2 gi|407464353|ref|YP_006775235.1| - 0.033 14.3 0.4 0.083 13.0 0.1 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5343) ArAE_1_C PF11728.8 gi|407464353|ref|YP_006775235.1| - 0.08 12.9 4.7 0.24 11.4 2.1 2.6 2 1 0 2 2 2 0 Putative aromatic acid exporter C-terminal domain NADH-UOR_E PF16514.5 gi|407464353|ref|YP_006775235.1| - 0.13 12.6 1.3 0.29 11.5 0.3 2.1 2 0 0 2 2 2 0 putative NADH-ubiquinone oxidoreductase chain E NPA PF16469.5 gi|407464353|ref|YP_006775235.1| - 0.16 12.5 0.2 0.16 12.5 0.2 2.1 2 1 0 2 2 2 0 Nematode polyprotein allergen ABA-1 Med21 PF11221.8 gi|407464353|ref|YP_006775235.1| - 0.18 12.1 4.3 1.5 9.1 0.1 2.7 2 1 0 2 2 2 0 Subunit 21 of Mediator complex Phi-29_GP16_7 PF06720.11 gi|407464353|ref|YP_006775235.1| - 0.47 10.3 3.8 2.8 7.8 0.4 2.6 2 1 1 3 3 3 0 Bacteriophage phi-29 early protein GP16.7 PHO4 PF01384.20 gi|407464354|ref|YP_006775236.1| - 1.3e-82 277.6 32.6 9.1e-82 274.8 32.6 1.9 1 1 0 1 1 1 1 Phosphate transporter family Sbt_1 PF05982.12 gi|407464355|ref|YP_006775237.1| - 1.7e-102 342.9 24.1 1.9e-102 342.7 24.1 1.0 1 0 0 1 1 1 1 Na+-dependent bicarbonate transporter superfamily DUF1772 PF08592.11 gi|407464355|ref|YP_006775237.1| - 0.03 14.7 8.5 0.31 11.3 4.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1772) DUF5464 PF17552.2 gi|407464355|ref|YP_006775237.1| - 0.86 9.9 4.7 8.9 6.7 0.2 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5464) P-II PF00543.22 gi|407464356|ref|YP_006775238.1| - 3.5e-05 24.4 0.2 4.9e-05 23.9 0.2 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF190 PF02641.15 gi|407464356|ref|YP_006775238.1| - 0.0056 17.0 0.4 0.009 16.3 0.4 1.3 1 1 0 1 1 1 1 Uncharacterized ACR, COG1993 DUF3240 PF11582.8 gi|407464356|ref|YP_006775238.1| - 0.0063 16.6 0.1 0.015 15.4 0.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF3240) HTH_5 PF01022.20 gi|407464357|ref|YP_006775239.1| - 5.5e-18 64.6 0.6 9.2e-18 63.9 0.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|407464357|ref|YP_006775239.1| - 6.8e-11 41.6 0.5 5e-10 38.8 0.1 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|407464357|ref|YP_006775239.1| - 2.3e-08 34.0 0.0 3.4e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|407464357|ref|YP_006775239.1| - 0.00014 21.7 0.0 0.00019 21.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|407464357|ref|YP_006775239.1| - 0.00025 20.9 0.2 0.0005 19.9 0.0 1.5 2 0 0 2 2 2 1 MarR family HTH_34 PF13601.6 gi|407464357|ref|YP_006775239.1| - 0.0006 20.0 0.2 0.00077 19.6 0.2 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain TFIIE_alpha PF02002.17 gi|407464357|ref|YP_006775239.1| - 0.0014 18.4 0.3 0.0018 18.1 0.3 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_IclR PF09339.10 gi|407464357|ref|YP_006775239.1| - 0.0019 18.0 0.0 0.0034 17.1 0.0 1.6 1 1 0 1 1 1 1 IclR helix-turn-helix domain Penicillinase_R PF03965.16 gi|407464357|ref|YP_006775239.1| - 0.0022 18.3 0.3 0.0029 18.0 0.3 1.2 1 0 0 1 1 1 1 Penicillinase repressor MarR_2 PF12802.7 gi|407464357|ref|YP_006775239.1| - 0.0072 16.2 0.0 0.0094 15.8 0.0 1.2 1 0 0 1 1 1 1 MarR family Cdc6_C PF09079.11 gi|407464357|ref|YP_006775239.1| - 0.012 15.6 0.2 0.016 15.2 0.2 1.3 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain ArsR PF09824.9 gi|407464357|ref|YP_006775239.1| - 0.015 14.9 0.4 0.052 13.1 0.4 1.8 1 1 0 1 1 1 0 ArsR transcriptional regulator Rrf2 PF02082.20 gi|407464357|ref|YP_006775239.1| - 0.02 15.2 0.0 0.025 14.9 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator DUF2551 PF10826.8 gi|407464357|ref|YP_006775239.1| - 0.022 15.0 0.3 0.073 13.3 0.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2551) HTH_11 PF08279.12 gi|407464357|ref|YP_006775239.1| - 0.053 13.5 0.2 0.23 11.4 0.0 1.9 2 0 0 2 2 2 0 HTH domain Arg_repressor PF01316.21 gi|407464357|ref|YP_006775239.1| - 0.058 13.2 0.4 0.15 11.9 0.4 1.8 1 1 0 1 1 1 0 Arginine repressor, DNA binding domain B-block_TFIIIC PF04182.12 gi|407464357|ref|YP_006775239.1| - 0.09 12.9 0.3 0.15 12.2 0.3 1.6 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC LMWPc PF01451.21 gi|407464358|ref|YP_006775240.1| - 3.5e-12 46.9 0.0 7.4e-12 45.8 0.0 1.5 1 1 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase MIP PF00230.20 gi|407464359|ref|YP_006775241.1| - 2.7e-37 128.7 18.1 3.1e-37 128.5 18.1 1.0 1 0 0 1 1 1 1 Major intrinsic protein Porphobil_deam PF01379.20 gi|407464360|ref|YP_006775242.1| - 3.3e-68 229.2 0.0 4.1e-68 228.9 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|407464360|ref|YP_006775242.1| - 4.1e-12 46.3 0.0 1.3e-11 44.7 0.0 1.9 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain Lipoprotein_22 PF17294.2 gi|407464360|ref|YP_006775242.1| - 0.041 13.5 0.4 0.15 11.7 0.1 1.9 2 0 0 2 2 2 0 Uncharacterised lipoprotein family CreD PF06123.12 gi|407464360|ref|YP_006775242.1| - 0.21 10.3 0.0 0.27 9.9 0.0 1.1 1 0 0 1 1 1 0 Inner membrane protein CreD TP_methylase PF00590.20 gi|407464361|ref|YP_006775243.1| - 3.9e-51 174.0 0.1 4.4e-51 173.8 0.1 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF600 PF04634.12 gi|407464361|ref|YP_006775243.1| - 0.045 13.8 0.0 0.085 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF600 HEM4 PF02602.15 gi|407464362|ref|YP_006775244.1| - 1.3e-44 152.3 0.0 1.4e-44 152.2 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD MgtC PF02308.16 gi|407464363|ref|YP_006775245.1| - 1.6e-37 128.5 9.9 1.9e-37 128.3 9.9 1.0 1 0 0 1 1 1 1 MgtC family UPF0051 PF01458.17 gi|407464364|ref|YP_006775246.1| - 3.8e-72 242.5 0.1 5.1e-72 242.1 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ApoLp-III PF07464.11 gi|407464364|ref|YP_006775246.1| - 0.081 13.0 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) UPF0051 PF01458.17 gi|407464365|ref|YP_006775247.1| - 2.7e-62 210.3 1.4 3.6e-62 209.9 1.4 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) NMT1 PF09084.11 gi|407464365|ref|YP_006775247.1| - 0.014 15.4 0.0 0.03 14.2 0.0 1.5 1 0 0 1 1 1 0 NMT1/THI5 like Rieske PF00355.26 gi|407464366|ref|YP_006775248.1| - 1.9e-17 63.0 0.0 2.2e-17 62.8 0.0 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|407464366|ref|YP_006775248.1| - 5.3e-11 42.4 0.0 6e-11 42.2 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Aminotran_5 PF00266.19 gi|407464367|ref|YP_006775249.1| - 4.4e-149 496.5 0.9 5e-149 496.3 0.9 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|407464367|ref|YP_006775249.1| - 3.8e-05 23.0 0.1 0.00025 20.3 0.1 1.9 2 0 0 2 2 2 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|407464367|ref|YP_006775249.1| - 4.6e-05 22.1 0.2 0.0001 21.0 0.1 1.7 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme NifU_N PF01592.16 gi|407464368|ref|YP_006775250.1| - 1e-30 106.5 0.1 1.2e-30 106.3 0.1 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain SufE PF02657.15 gi|407464368|ref|YP_006775250.1| - 0.064 13.1 0.0 0.082 12.8 0.0 1.2 1 0 0 1 1 1 0 Fe-S metabolism associated domain PGK PF00162.19 gi|407464370|ref|YP_006775252.1| - 1.1e-87 294.4 0.1 1.3e-87 294.2 0.1 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase PAP2 PF01569.21 gi|407464371|ref|YP_006775253.1| - 3e-20 72.4 0.4 3e-20 72.4 0.4 2.2 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|407464371|ref|YP_006775253.1| - 6.9e-09 35.7 6.6 6.9e-09 35.7 6.6 2.7 1 1 0 2 2 2 1 PAP2 superfamily PAP2_C PF14360.6 gi|407464371|ref|YP_006775253.1| - 0.00013 22.4 6.4 0.00016 22.2 0.1 3.0 3 0 0 3 3 3 1 PAP2 superfamily C-terminal CAP_assoc_N PF14504.6 gi|407464372|ref|YP_006775254.1| - 0.027 14.2 0.1 0.043 13.6 0.1 1.3 1 0 0 1 1 1 0 CAP-associated N-terminal GreA_GreB PF01272.19 gi|407464372|ref|YP_006775254.1| - 0.092 12.7 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Transcription elongation factor, GreA/GreB, C-term Baculo_PEP_C PF04513.12 gi|407464373|ref|YP_006775255.1| - 0.01 15.9 2.4 0.01 15.9 2.4 2.9 1 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Flavi_capsid PF01003.19 gi|407464373|ref|YP_006775255.1| - 0.033 14.0 0.1 0.033 14.0 0.1 2.9 4 1 0 4 4 4 0 Flavivirus capsid protein C MscS_porin PF12795.7 gi|407464373|ref|YP_006775255.1| - 0.056 13.0 41.8 0.028 14.0 22.8 2.4 1 1 0 2 2 2 0 Mechanosensitive ion channel porin domain PhageMin_Tail PF10145.9 gi|407464373|ref|YP_006775255.1| - 0.21 11.4 6.9 11 5.8 0.0 2.5 1 1 1 2 2 2 0 Phage-related minor tail protein KNOX2 PF03791.13 gi|407464373|ref|YP_006775255.1| - 0.57 9.7 4.1 6.8 6.3 1.1 2.8 2 0 0 2 2 2 0 KNOX2 domain CorA PF01544.18 gi|407464373|ref|YP_006775255.1| - 0.83 8.9 12.5 0.34 10.2 8.3 2.2 2 1 0 2 2 2 0 CorA-like Mg2+ transporter protein Uso1_p115_C PF04871.13 gi|407464373|ref|YP_006775255.1| - 2.9 8.3 51.6 1.2 9.5 9.8 3.1 1 1 2 3 3 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region DotU PF09850.9 gi|407464373|ref|YP_006775255.1| - 3.1 7.4 5.9 3.3 7.4 0.2 2.9 2 1 0 2 2 2 0 Type VI secretion system protein DotU DUF948 PF06103.11 gi|407464373|ref|YP_006775255.1| - 3.2 8.1 12.3 0.28 11.5 0.6 3.6 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF3584 PF12128.8 gi|407464373|ref|YP_006775255.1| - 5 4.5 37.3 2.9 5.3 19.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) Ca_bind_SSO6904 PF18249.1 gi|407464373|ref|YP_006775255.1| - 7.4 7.0 9.9 0.79 10.1 0.5 3.1 2 1 0 3 3 3 0 Calcium binding protein SSO6904 DUF2203 PF09969.9 gi|407464373|ref|YP_006775255.1| - 8 7.2 27.9 1.1 10.0 5.4 3.2 1 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) DUF973 PF06157.11 gi|407464374|ref|YP_006775256.1| - 0.026 13.6 4.8 0.14 11.2 0.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF973) MFS_Mycoplasma PF07672.13 gi|407464374|ref|YP_006775256.1| - 0.052 12.8 0.1 0.052 12.8 0.1 1.8 2 1 0 2 2 2 0 Mycoplasma MFS transporter DUF1700 PF08006.11 gi|407464374|ref|YP_006775256.1| - 0.81 9.2 7.0 5.9 6.4 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) REPA_OB_2 PF16900.5 gi|407464375|ref|YP_006775257.1| - 0.0038 17.1 1.3 0.0044 16.9 1.3 1.1 1 0 0 1 1 1 1 Replication protein A OB domain PK_C PF02887.16 gi|407464375|ref|YP_006775257.1| - 0.0046 17.2 0.1 0.0057 16.9 0.1 1.1 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain SNARE_assoc PF09335.11 gi|407464376|ref|YP_006775258.1| - 0.21 12.1 10.6 0.025 15.1 6.4 1.7 2 1 0 2 2 2 0 SNARE associated Golgi protein HD PF01966.22 gi|407464377|ref|YP_006775259.1| - 3e-19 69.4 0.5 4.6e-19 68.8 0.5 1.3 1 0 0 1 1 1 1 HD domain DUF4917 PF16263.5 gi|407464377|ref|YP_006775259.1| - 0.046 13.1 0.4 0.073 12.4 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4917) JmjN PF02375.17 gi|407464378|ref|YP_006775260.1| - 0.0018 18.2 2.2 1 9.4 0.0 2.3 1 1 1 2 2 2 2 jmjN domain ALAD PF00490.21 gi|407464379|ref|YP_006775261.1| - 8.4e-137 455.6 1.7 9.5e-137 455.4 1.7 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase DUF2674 PF10879.8 gi|407464379|ref|YP_006775261.1| - 0.041 13.4 0.0 0.1 12.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2674) GlutR_N PF05201.15 gi|407464380|ref|YP_006775262.1| - 4.8e-38 130.2 0.4 1.2e-37 128.9 0.4 1.6 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.20 gi|407464380|ref|YP_006775262.1| - 2.1e-29 102.3 0.4 4.3e-29 101.3 0.0 1.7 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.20 gi|407464380|ref|YP_006775262.1| - 1.4e-18 67.1 2.1 3.8e-18 65.7 2.1 1.8 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.17 gi|407464380|ref|YP_006775262.1| - 0.00041 20.9 0.0 0.002 18.7 0.0 2.2 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|407464380|ref|YP_006775262.1| - 0.0085 15.5 0.0 0.02 14.2 0.0 1.6 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|407464380|ref|YP_006775262.1| - 0.037 14.5 0.0 0.13 12.8 0.0 1.9 1 0 0 1 1 1 0 Putative NAD(P)-binding DUF4795 PF16043.5 gi|407464380|ref|YP_006775262.1| - 0.16 11.5 9.0 0.086 12.4 6.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) VP9 PF09625.10 gi|407464380|ref|YP_006775262.1| - 0.21 11.8 2.8 4.4 7.6 0.3 3.2 3 0 0 3 3 3 0 VP9 protein FAM25 PF15825.5 gi|407464380|ref|YP_006775262.1| - 1.9 8.9 6.2 0.37 11.1 1.2 2.4 2 1 0 2 2 2 0 FAM25 family DUF1664 PF07889.12 gi|407464380|ref|YP_006775262.1| - 6.1 6.9 14.0 1.1 9.3 2.5 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF1664) NAD_binding_7 PF13241.6 gi|407464381|ref|YP_006775263.1| - 2.6e-21 76.0 1.8 5e-21 75.1 0.2 1.9 2 0 0 2 2 2 1 Putative NAD(P)-binding Sirohm_synth_M PF14824.6 gi|407464381|ref|YP_006775263.1| - 0.00032 20.1 0.1 0.00084 18.7 0.1 1.6 1 0 0 1 1 1 1 Sirohaem biosynthesis protein central IlvN PF07991.12 gi|407464381|ref|YP_006775263.1| - 0.00054 19.6 1.2 0.001 18.7 1.2 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 gi|407464381|ref|YP_006775263.1| - 0.0017 18.4 0.7 0.0017 18.4 0.7 1.9 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Herpes_BLRF2 PF05812.12 gi|407464381|ref|YP_006775263.1| - 0.01 16.0 3.9 0.03 14.5 0.6 2.6 1 1 1 2 2 2 0 Herpesvirus BLRF2 protein F420_oxidored PF03807.17 gi|407464381|ref|YP_006775263.1| - 0.027 15.0 1.2 0.12 13.0 1.3 2.2 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 gi|407464381|ref|YP_006775263.1| - 0.034 14.4 0.1 0.064 13.5 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain Pyr_redox_3 PF13738.6 gi|407464381|ref|YP_006775263.1| - 0.042 13.1 0.2 0.042 13.1 0.2 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Oxidored_nitro PF00148.19 gi|407464381|ref|YP_006775263.1| - 0.092 11.5 0.0 0.15 10.7 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase XdhC_C PF13478.6 gi|407464381|ref|YP_006775263.1| - 0.13 12.7 0.0 0.51 10.8 0.0 1.9 2 0 0 2 2 2 0 XdhC Rossmann domain CysG_dimeriser PF10414.9 gi|407464381|ref|YP_006775263.1| - 0.18 11.6 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region CtnDOT_TraJ PF07863.11 gi|407464381|ref|YP_006775263.1| - 0.22 12.2 0.8 0.53 11.0 0.2 1.9 2 0 0 2 2 2 0 Homologues of TraJ from Bacteroides conjugative transposon ENT PF03735.14 gi|407464381|ref|YP_006775263.1| - 0.37 10.9 6.3 2.7 8.1 0.5 2.7 2 1 0 2 2 2 0 ENT domain DUF1524 PF07510.11 gi|407464381|ref|YP_006775263.1| - 1.2 9.0 9.1 3.3 7.6 7.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1524) AsnC_trans_reg2 PF17805.1 gi|407464382|ref|YP_006775264.1| - 3.4e-54 180.9 0.0 2e-30 104.7 0.0 2.5 2 0 0 2 2 2 2 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|407464382|ref|YP_006775264.1| - 0.00012 21.8 0.0 0.024 14.5 0.0 2.5 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain zf-B_box PF00643.24 gi|407464383|ref|YP_006775265.1| - 0.0062 16.7 3.8 0.01 16.0 3.8 1.3 1 0 0 1 1 1 1 B-box zinc finger C5HCH PF17982.1 gi|407464383|ref|YP_006775265.1| - 0.039 14.1 0.6 0.063 13.4 0.6 1.4 1 0 0 1 1 1 0 NSD Cys-His rich domain YodL PF14191.6 gi|407464383|ref|YP_006775265.1| - 0.063 14.1 1.2 0.093 13.6 1.2 1.4 1 1 0 1 1 1 0 YodL-like Gmx_para_CXXCG PF09535.10 gi|407464383|ref|YP_006775265.1| - 0.082 12.2 0.1 0.096 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) Nefa_Nip30_N PF10187.9 gi|407464383|ref|YP_006775265.1| - 0.099 13.0 0.5 0.13 12.6 0.5 1.2 1 0 0 1 1 1 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 PADR1 PF08063.12 gi|407464383|ref|YP_006775265.1| - 0.24 11.2 4.2 0.48 10.2 4.2 1.5 1 0 0 1 1 1 0 PADR1 (NUC008) domain Aldo_ket_red PF00248.21 gi|407464384|ref|YP_006775266.1| - 2.9e-51 174.4 0.1 3.2e-51 174.3 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Chlor_dismutase PF06778.12 gi|407464385|ref|YP_006775267.1| - 8.6e-57 191.9 0.2 1.1e-56 191.5 0.2 1.0 1 0 0 1 1 1 1 Chlorite dismutase Pterin_4a PF01329.19 gi|407464385|ref|YP_006775267.1| - 0.078 13.2 0.1 0.2 11.9 0.0 1.7 2 0 0 2 2 2 0 Pterin 4 alpha carbinolamine dehydratase DUF3801 PF12687.7 gi|407464385|ref|YP_006775267.1| - 0.13 12.3 0.1 0.17 11.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3801) AsnC_trans_reg PF01037.21 gi|407464385|ref|YP_006775267.1| - 0.18 11.8 1.7 17 5.5 0.4 2.4 2 1 0 2 2 2 0 Lrp/AsnC ligand binding domain DUF167 PF02594.16 gi|407464386|ref|YP_006775268.1| - 1e-14 54.4 2.1 1.2e-14 54.2 2.1 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 MinE PF03776.14 gi|407464386|ref|YP_006775268.1| - 0.0074 16.3 2.0 0.13 12.2 0.5 2.1 1 1 1 2 2 2 2 Septum formation topological specificity factor MinE ABC_tran PF00005.27 gi|407464387|ref|YP_006775269.1| - 3.6e-20 72.9 0.0 5.3e-20 72.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|407464387|ref|YP_006775269.1| - 1.4e-10 41.0 0.6 1.1e-05 25.0 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|407464387|ref|YP_006775269.1| - 2e-09 37.7 0.1 0.00031 20.7 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|407464387|ref|YP_006775269.1| - 0.0007 19.3 0.6 0.0015 18.2 0.1 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_33 PF13671.6 gi|407464387|ref|YP_006775269.1| - 0.002 18.3 0.0 0.0031 17.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|407464387|ref|YP_006775269.1| - 0.0037 16.9 0.1 0.053 13.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|407464387|ref|YP_006775269.1| - 0.0057 16.4 0.1 0.37 10.4 0.1 2.2 1 1 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 gi|407464387|ref|YP_006775269.1| - 0.01 16.3 0.0 0.027 14.8 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 gi|407464387|ref|YP_006775269.1| - 0.012 15.2 0.0 0.03 13.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|407464387|ref|YP_006775269.1| - 0.015 14.0 2.6 1.7 7.2 0.2 2.3 3 0 0 3 3 3 0 AAA domain AAA_23 PF13476.6 gi|407464387|ref|YP_006775269.1| - 0.022 15.3 0.9 0.051 14.1 0.2 1.8 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|407464387|ref|YP_006775269.1| - 0.032 14.8 0.3 0.21 12.2 0.3 2.3 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|407464387|ref|YP_006775269.1| - 0.033 13.9 0.0 0.074 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|407464387|ref|YP_006775269.1| - 0.038 13.9 0.0 0.089 12.7 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_22 PF13401.6 gi|407464387|ref|YP_006775269.1| - 0.042 14.1 0.1 0.1 12.9 0.1 1.9 1 1 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|407464387|ref|YP_006775269.1| - 0.051 13.5 2.2 0.47 10.3 0.0 2.2 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_28 PF13521.6 gi|407464387|ref|YP_006775269.1| - 0.056 13.7 0.1 0.31 11.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 gi|407464387|ref|YP_006775269.1| - 0.057 13.9 0.7 1.6 9.1 0.7 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF711 PF05167.12 gi|407464387|ref|YP_006775269.1| - 0.057 12.3 0.0 0.078 11.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised ACR (DUF711) DUF87 PF01935.17 gi|407464387|ref|YP_006775269.1| - 0.073 13.2 0.1 6.5 6.8 0.0 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain MutS_V PF00488.21 gi|407464387|ref|YP_006775269.1| - 0.081 12.9 0.2 2.2 8.3 0.0 2.1 2 0 0 2 2 2 0 MutS domain V AAA_14 PF13173.6 gi|407464387|ref|YP_006775269.1| - 0.082 13.0 0.1 0.19 11.8 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|407464387|ref|YP_006775269.1| - 0.11 12.9 0.5 0.75 10.2 0.0 2.2 2 1 0 2 2 2 0 AAA domain Acetyltransf_18 PF18014.1 gi|407464387|ref|YP_006775269.1| - 0.13 12.1 0.0 6 6.7 0.0 2.4 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain RNA_helicase PF00910.22 gi|407464387|ref|YP_006775269.1| - 0.14 12.6 0.0 0.43 11.0 0.0 1.8 2 0 0 2 2 2 0 RNA helicase TFIIB PF00382.19 gi|407464388|ref|YP_006775270.1| - 1.1e-24 86.2 2.1 2e-11 43.8 0.1 2.5 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|407464388|ref|YP_006775270.1| - 2.3e-10 39.8 2.2 2.3e-10 39.8 2.2 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding RPA_interact_C PF14768.6 gi|407464388|ref|YP_006775270.1| - 0.0019 18.7 1.5 0.074 13.6 0.1 2.8 2 1 0 2 2 2 1 Replication protein A interacting C-terminal Auto_anti-p27 PF06677.12 gi|407464388|ref|YP_006775270.1| - 0.025 14.7 1.1 0.025 14.7 1.1 2.1 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Cys_knot PF00007.22 gi|407464388|ref|YP_006775270.1| - 0.072 13.4 1.0 0.072 13.4 1.0 2.2 2 0 0 2 2 2 0 Cystine-knot domain OrfB_Zn_ribbon PF07282.11 gi|407464388|ref|YP_006775270.1| - 0.079 12.9 1.6 0.15 12.0 0.4 2.0 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-RRN7 PF11781.8 gi|407464388|ref|YP_006775270.1| - 0.11 12.1 0.4 0.11 12.1 0.4 1.9 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DZR PF12773.7 gi|407464388|ref|YP_006775270.1| - 0.25 11.4 0.2 0.25 11.4 0.2 2.2 2 0 0 2 2 2 0 Double zinc ribbon zinc-ribbons_6 PF07191.12 gi|407464388|ref|YP_006775270.1| - 0.3 11.1 3.0 1.5 8.9 0.2 2.5 2 0 0 2 2 2 0 zinc-ribbons zf-ribbon_3 PF13248.6 gi|407464388|ref|YP_006775270.1| - 8.9 5.9 9.5 1.5 8.3 3.4 2.7 2 1 0 2 2 2 0 zinc-ribbon domain Spt4 PF06093.13 gi|407464388|ref|YP_006775270.1| - 9.9 6.3 9.8 3.2 7.9 1.5 3.3 3 2 0 3 3 3 0 Spt4/RpoE2 zinc finger Gar1 PF04410.14 gi|407464389|ref|YP_006775271.1| - 5.9e-06 26.1 0.0 6.7e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region SRP19 PF01922.17 gi|407464390|ref|YP_006775272.1| - 1.5e-13 51.5 0.0 1.9e-13 51.1 0.0 1.1 1 0 0 1 1 1 1 SRP19 protein Ribosomal_S8e PF01201.22 gi|407464391|ref|YP_006775273.1| - 6.7e-21 74.9 5.0 7.9e-21 74.7 5.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8e DUF5043 PF16446.5 gi|407464391|ref|YP_006775273.1| - 0.054 13.5 0.7 0.075 13.0 0.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5043) SMC_ScpB PF04079.16 gi|407464392|ref|YP_006775274.1| - 1.4e-34 119.0 0.6 1.7e-34 118.8 0.6 1.0 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB HHH_3 PF12836.7 gi|407464392|ref|YP_006775274.1| - 0.02 15.1 0.0 0.045 14.0 0.0 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix motif Sec7_N PF12783.7 gi|407464392|ref|YP_006775274.1| - 0.066 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Guanine nucleotide exchange factor in Golgi transport N-terminal SMC_ScpA PF02616.14 gi|407464393|ref|YP_006775275.1| - 1.7e-06 28.1 1.4 0.02 14.8 0.0 2.1 2 0 0 2 2 2 2 Segregation and condensation protein ScpA ADH_N PF08240.12 gi|407464394|ref|YP_006775276.1| - 6.2e-34 116.2 0.8 1e-33 115.5 0.8 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|407464394|ref|YP_006775276.1| - 9.3e-27 93.6 0.1 1.4e-26 93.0 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|407464394|ref|YP_006775276.1| - 1.2e-11 45.8 0.0 1.8e-11 45.2 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|407464394|ref|YP_006775276.1| - 4.1e-08 33.0 0.1 1e-07 31.7 0.1 1.5 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus DapB_N PF01113.20 gi|407464394|ref|YP_006775276.1| - 0.017 15.2 0.3 0.034 14.3 0.3 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus PglD_N PF17836.1 gi|407464394|ref|YP_006775276.1| - 0.018 15.6 0.2 0.042 14.5 0.2 1.6 1 0 0 1 1 1 0 PglD N-terminal domain Urocanase PF01175.18 gi|407464394|ref|YP_006775276.1| - 0.051 13.2 0.1 0.093 12.4 0.1 1.3 1 0 0 1 1 1 0 Urocanase Rossmann-like domain UDPG_MGDP_dh_N PF03721.14 gi|407464394|ref|YP_006775276.1| - 0.11 12.1 0.2 0.17 11.4 0.2 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|407464394|ref|YP_006775276.1| - 0.13 12.5 0.2 0.22 11.8 0.2 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 gi|407464394|ref|YP_006775276.1| - 0.14 12.4 0.3 0.45 10.8 0.1 1.9 2 0 0 2 2 2 0 TrkA-N domain Response_reg PF00072.24 gi|407464395|ref|YP_006775277.1| - 2.7e-17 63.0 0.3 4.2e-17 62.3 0.3 1.3 1 0 0 1 1 1 1 Response regulator receiver domain TPR_1 PF00515.28 gi|407464395|ref|YP_006775277.1| - 0.0019 18.0 0.1 0.015 15.1 0.1 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407464395|ref|YP_006775277.1| - 0.0037 17.3 0.1 0.029 14.5 0.1 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407464395|ref|YP_006775277.1| - 0.0069 16.5 0.2 0.047 13.9 0.2 2.4 1 0 0 1 1 1 1 Tetratricopeptide repeat PK_C PF02887.16 gi|407464395|ref|YP_006775277.1| - 0.0075 16.5 0.0 0.017 15.4 0.0 1.6 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain ANAPC3 PF12895.7 gi|407464395|ref|YP_006775277.1| - 0.0098 16.1 6.4 1.1 9.6 0.4 2.7 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 gi|407464395|ref|YP_006775277.1| - 0.039 14.5 0.0 0.11 13.0 0.0 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat NFACT-R_2 PF18297.1 gi|407464395|ref|YP_006775277.1| - 0.054 13.7 0.2 0.76 10.0 0.0 2.6 3 0 0 3 3 3 0 NFACT protein RNA binding domain TPR_12 PF13424.6 gi|407464395|ref|YP_006775277.1| - 0.087 13.1 0.2 4.5 7.6 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 gi|407464395|ref|YP_006775277.1| - 0.14 12.8 0.2 1.3 9.8 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat HTH_AsnC-type PF13404.6 gi|407464396|ref|YP_006775278.1| - 3.7e-10 39.5 0.5 1.3e-08 34.6 0.6 3.0 2 1 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|407464396|ref|YP_006775278.1| - 2.7e-08 33.2 6.7 0.0001 21.8 0.1 2.9 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding HTH_12 PF08461.10 gi|407464396|ref|YP_006775278.1| - 2.9e-07 30.3 0.9 4.9e-07 29.6 0.3 1.6 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain HTH_11 PF08279.12 gi|407464396|ref|YP_006775278.1| - 2.9e-06 27.1 0.7 1.5e-05 24.8 0.6 2.3 1 1 0 1 1 1 1 HTH domain HTH_Tnp_Tc3_2 PF01498.18 gi|407464396|ref|YP_006775278.1| - 2.6e-05 24.4 1.0 5.3e-05 23.4 0.1 1.9 3 0 0 3 3 2 1 Transposase Penicillinase_R PF03965.16 gi|407464396|ref|YP_006775278.1| - 0.00015 22.1 0.3 0.00067 20.0 0.0 2.0 2 0 0 2 2 2 1 Penicillinase repressor DUF3658 PF12395.8 gi|407464396|ref|YP_006775278.1| - 0.00044 20.1 0.3 0.021 14.7 0.0 2.2 2 1 0 2 2 2 1 Protein of unknown function HTH_20 PF12840.7 gi|407464396|ref|YP_006775278.1| - 0.00044 20.2 0.0 0.00068 19.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|407464396|ref|YP_006775278.1| - 0.002 17.8 0.1 0.0065 16.2 0.1 1.9 1 1 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_32 PF13565.6 gi|407464396|ref|YP_006775278.1| - 0.014 16.0 0.0 0.031 14.9 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain FUR PF01475.19 gi|407464396|ref|YP_006775278.1| - 0.016 15.4 0.2 0.042 14.0 0.0 1.7 2 0 0 2 2 2 0 Ferric uptake regulator family Myb_DNA-bind_4 PF13837.6 gi|407464396|ref|YP_006775278.1| - 0.017 15.5 0.2 0.045 14.1 0.0 1.7 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain RNA_binding PF01877.17 gi|407464396|ref|YP_006775278.1| - 0.027 14.7 1.8 0.071 13.4 0.4 2.0 2 0 0 2 2 2 0 RNA binding DUF3783 PF12646.7 gi|407464396|ref|YP_006775278.1| - 0.04 13.9 0.0 0.26 11.3 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF3783) Nuc_N PF14448.6 gi|407464396|ref|YP_006775278.1| - 0.056 13.3 0.9 0.087 12.7 0.2 1.7 2 0 0 2 2 2 0 Nuclease N terminal Arg_repressor PF01316.21 gi|407464396|ref|YP_006775278.1| - 0.06 13.1 0.2 0.14 11.9 0.2 1.7 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain HxlR PF01638.17 gi|407464396|ref|YP_006775278.1| - 0.06 13.2 0.1 1.6 8.6 0.0 2.2 2 0 0 2 2 2 0 HxlR-like helix-turn-helix Sigma70_r4_2 PF08281.12 gi|407464396|ref|YP_006775278.1| - 0.077 12.7 0.1 0.15 11.8 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 CxxCxxCC PF03692.15 gi|407464397|ref|YP_006775279.1| - 2.4e-08 34.5 5.2 3e-08 34.2 1.7 2.3 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain eIF-1a PF01176.19 gi|407464398|ref|YP_006775280.1| - 2.2e-17 62.6 1.2 3.2e-17 62.1 1.2 1.3 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 CSD PF00313.22 gi|407464399|ref|YP_006775281.1| - 2.3e-20 72.2 3.7 2.8e-20 71.9 3.7 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 gi|407464399|ref|YP_006775281.1| - 4.1e-06 26.4 0.9 4.2e-06 26.4 0.9 1.1 1 0 0 1 1 1 1 Ribonuclease B OB domain MazE_antitoxin PF04014.18 gi|407464399|ref|YP_006775281.1| - 0.21 11.6 0.8 0.58 10.2 0.8 1.8 1 1 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin eIF-5a PF01287.20 gi|407464401|ref|YP_006775283.1| - 5.1e-07 29.7 2.3 6.9e-07 29.3 2.3 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|407464401|ref|YP_006775283.1| - 1.8e-05 24.6 0.1 0.053 13.6 0.0 2.5 2 0 0 2 2 2 2 Elongation factor P (EF-P) KOW-like domain UL11 PF11094.8 gi|407464401|ref|YP_006775283.1| - 0.16 11.8 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Membrane-associated tegument protein Diphthami_syn_2 PF01902.17 gi|407464402|ref|YP_006775284.1| - 1.2e-56 191.7 0.0 1.3e-56 191.5 0.0 1.0 1 0 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 gi|407464402|ref|YP_006775284.1| - 0.0093 15.5 0.0 0.017 14.6 0.0 1.5 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC SRP54 PF00448.22 gi|407464403|ref|YP_006775285.1| - 2e-69 233.2 0.2 3.7e-69 232.3 0.2 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|407464403|ref|YP_006775285.1| - 1.2e-24 86.8 3.5 1.3e-24 86.7 0.4 2.6 4 0 0 4 4 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|407464403|ref|YP_006775285.1| - 1.3e-17 63.8 4.9 1.3e-17 63.7 1.2 2.5 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|407464403|ref|YP_006775285.1| - 2.5e-06 27.5 0.1 6.4e-06 26.2 0.1 1.7 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MeaB PF03308.16 gi|407464403|ref|YP_006775285.1| - 1.2e-05 24.5 0.0 9.4e-05 21.5 0.0 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB ParA PF10609.9 gi|407464403|ref|YP_006775285.1| - 9.2e-05 22.0 0.1 0.00016 21.2 0.1 1.4 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase MobB PF03205.14 gi|407464403|ref|YP_006775285.1| - 0.00019 21.3 0.2 0.0005 20.0 0.2 1.7 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.6 gi|407464403|ref|YP_006775285.1| - 0.0002 21.8 1.4 0.0013 19.2 0.1 2.4 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.20 gi|407464403|ref|YP_006775285.1| - 0.00039 20.4 0.4 0.00089 19.2 0.1 1.8 2 0 0 2 2 1 1 Adenylylsulphate kinase AAA_18 PF13238.6 gi|407464403|ref|YP_006775285.1| - 0.00049 20.6 0.3 0.002 18.6 0.3 2.2 1 1 0 1 1 1 1 AAA domain cobW PF02492.19 gi|407464403|ref|YP_006775285.1| - 0.00055 19.6 1.3 0.0042 16.7 1.3 2.1 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 gi|407464403|ref|YP_006775285.1| - 0.0006 19.6 0.4 0.9 9.3 0.2 2.4 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation AAA_22 PF13401.6 gi|407464403|ref|YP_006775285.1| - 0.00077 19.7 0.1 0.0023 18.2 0.0 1.8 2 0 0 2 2 1 1 AAA domain AAA_31 PF13614.6 gi|407464403|ref|YP_006775285.1| - 0.00097 19.1 0.3 0.0032 17.4 0.2 1.9 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 gi|407464403|ref|YP_006775285.1| - 0.00099 19.5 0.1 0.0073 16.7 0.0 2.6 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) KTI12 PF08433.10 gi|407464403|ref|YP_006775285.1| - 0.0011 18.4 0.0 0.0028 17.2 0.0 1.6 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Zeta_toxin PF06414.12 gi|407464403|ref|YP_006775285.1| - 0.0013 18.0 0.0 0.0029 16.9 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin 6PF2K PF01591.18 gi|407464403|ref|YP_006775285.1| - 0.0028 17.0 0.0 0.0053 16.1 0.0 1.4 1 0 0 1 1 1 1 6-phosphofructo-2-kinase MMR_HSR1 PF01926.23 gi|407464403|ref|YP_006775285.1| - 0.0029 17.7 0.2 0.011 15.8 0.2 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase Thymidylate_kin PF02223.17 gi|407464403|ref|YP_006775285.1| - 0.0051 16.5 0.3 0.016 14.9 0.3 1.8 1 0 0 1 1 1 1 Thymidylate kinase NTPase_1 PF03266.15 gi|407464403|ref|YP_006775285.1| - 0.0052 16.7 1.7 0.0082 16.1 0.6 2.0 2 1 0 2 2 1 1 NTPase MipZ PF09140.11 gi|407464403|ref|YP_006775285.1| - 0.0068 15.7 0.4 0.68 9.2 0.4 2.3 1 1 0 1 1 1 1 ATPase MipZ AAA_30 PF13604.6 gi|407464403|ref|YP_006775285.1| - 0.0074 16.0 0.0 0.016 14.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|407464403|ref|YP_006775285.1| - 0.0078 16.4 0.0 0.014 15.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_26 PF13500.6 gi|407464403|ref|YP_006775285.1| - 0.0081 16.0 0.0 1.7 8.5 0.1 2.7 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|407464403|ref|YP_006775285.1| - 0.01 16.2 0.2 0.024 15.0 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 gi|407464403|ref|YP_006775285.1| - 0.014 15.4 0.1 0.038 14.0 0.1 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TssR PF17643.1 gi|407464403|ref|YP_006775285.1| - 0.015 13.3 0.1 0.05 11.5 0.1 1.7 2 0 0 2 2 2 0 Type VI secretion system, TssR AAA_24 PF13479.6 gi|407464403|ref|YP_006775285.1| - 0.016 15.0 0.2 0.038 13.7 0.2 1.7 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|407464403|ref|YP_006775285.1| - 0.017 14.9 0.1 0.034 13.9 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein LpxK PF02606.14 gi|407464403|ref|YP_006775285.1| - 0.022 13.9 0.1 0.035 13.2 0.1 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase G-alpha PF00503.20 gi|407464403|ref|YP_006775285.1| - 0.028 13.6 0.0 0.048 12.8 0.0 1.4 1 0 0 1 1 1 0 G-protein alpha subunit ABC_tran PF00005.27 gi|407464403|ref|YP_006775285.1| - 0.029 14.9 0.2 0.074 13.6 0.0 1.8 2 0 0 2 2 1 0 ABC transporter Arf PF00025.21 gi|407464403|ref|YP_006775285.1| - 0.038 13.4 0.0 0.082 12.4 0.0 1.5 1 0 0 1 1 1 0 ADP-ribosylation factor family SpoVIF PF14069.6 gi|407464403|ref|YP_006775285.1| - 0.04 13.7 0.2 0.16 11.7 0.2 2.1 1 0 0 1 1 1 0 Stage VI sporulation protein F IstB_IS21 PF01695.17 gi|407464403|ref|YP_006775285.1| - 0.047 13.4 0.1 0.16 11.7 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_28 PF13521.6 gi|407464403|ref|YP_006775285.1| - 0.05 13.8 0.2 0.085 13.1 0.2 1.3 1 0 0 1 1 1 0 AAA domain CLP1_P PF16575.5 gi|407464403|ref|YP_006775285.1| - 0.051 13.4 0.1 0.22 11.3 0.1 2.1 1 1 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop SRPRB PF09439.10 gi|407464403|ref|YP_006775285.1| - 0.057 12.8 0.4 0.4 10.1 0.2 2.2 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit LytR_C PF13399.6 gi|407464403|ref|YP_006775285.1| - 0.064 14.3 0.0 0.18 12.8 0.0 1.9 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator AAA_25 PF13481.6 gi|407464403|ref|YP_006775285.1| - 0.091 12.3 1.1 0.37 10.3 1.1 1.9 1 1 0 1 1 1 0 AAA domain VirC1 PF07015.11 gi|407464403|ref|YP_006775285.1| - 0.093 12.0 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 VirC1 protein AAA_7 PF12775.7 gi|407464403|ref|YP_006775285.1| - 0.17 11.4 0.1 0.31 10.5 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region NACHT PF05729.12 gi|407464403|ref|YP_006775285.1| - 0.28 11.1 1.2 0.53 10.2 0.3 1.9 2 0 0 2 2 2 0 NACHT domain MuF_C PF18819.1 gi|407464404|ref|YP_006775286.1| - 0.0023 17.9 0.1 0.005 16.8 0.1 1.5 1 0 0 1 1 1 1 Phage MuF-C-terminal domain THUMP PF02926.17 gi|407464404|ref|YP_006775286.1| - 0.0034 17.5 0.1 0.01 15.9 0.0 1.8 2 0 0 2 2 2 1 THUMP domain SprT-like PF10263.9 gi|407464405|ref|YP_006775287.1| - 0.048 13.5 0.0 0.089 12.7 0.0 1.5 1 0 0 1 1 1 0 SprT-like family Ribosomal_S27 PF01599.19 gi|407464406|ref|YP_006775288.1| - 3.4e-21 75.1 4.9 4.2e-21 74.9 4.9 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a Ribosomal_L37e PF01907.19 gi|407464406|ref|YP_006775288.1| - 0.00032 20.8 2.9 0.00049 20.2 2.9 1.3 1 0 0 1 1 1 1 Ribosomal protein L37e Nudix_N_2 PF14803.6 gi|407464406|ref|YP_006775288.1| - 0.00033 20.5 1.1 0.15 12.0 0.1 2.2 2 0 0 2 2 2 2 Nudix N-terminal DUF1451 PF07295.11 gi|407464406|ref|YP_006775288.1| - 0.0007 19.7 0.8 0.00075 19.6 0.8 1.0 1 0 0 1 1 1 1 Zinc-ribbon containing domain Ephrin_rec_like PF07699.13 gi|407464406|ref|YP_006775288.1| - 0.0075 16.0 1.7 0.0099 15.6 1.7 1.3 1 0 0 1 1 1 1 Putative ephrin-receptor like Cytochrome_C7 PF14522.6 gi|407464406|ref|YP_006775288.1| - 0.017 15.1 1.4 0.018 15.0 1.4 1.1 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c zf-NADH-PPase PF09297.11 gi|407464406|ref|YP_006775288.1| - 0.032 13.9 4.7 0.11 12.2 0.5 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|407464406|ref|YP_006775288.1| - 0.055 13.4 2.1 0.073 13.0 2.1 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|407464406|ref|YP_006775288.1| - 0.079 12.4 2.5 4.2 6.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_S24e PF01282.19 gi|407464407|ref|YP_006775289.1| - 1e-05 25.4 0.1 1.7e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein S24e DUF1682 PF07946.14 gi|407464407|ref|YP_006775289.1| - 0.0051 16.1 0.6 0.0051 16.1 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1682) DUF309 PF03745.14 gi|407464408|ref|YP_006775290.1| - 7.5e-18 64.0 0.7 1.5e-17 63.0 0.7 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF309) PhosphMutase PF10143.9 gi|407464409|ref|YP_006775291.1| - 1.3e-43 148.9 0.0 2.6e-43 147.8 0.0 1.6 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|407464409|ref|YP_006775291.1| - 4.3e-28 98.3 0.6 5.3e-28 98.0 0.6 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|407464409|ref|YP_006775291.1| - 0.001 18.7 0.0 0.0024 17.5 0.0 1.7 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF2187 PF09953.9 gi|407464409|ref|YP_006775291.1| - 0.022 14.8 0.1 0.11 12.5 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2187) GalP_UDP_transf PF01087.22 gi|407464410|ref|YP_006775292.1| - 8.2e-09 36.1 0.0 1.4e-08 35.4 0.0 1.4 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, N-terminal domain HIT PF01230.23 gi|407464410|ref|YP_006775292.1| - 4.4e-05 24.1 0.0 0.00085 20.0 0.0 2.3 2 0 0 2 2 2 1 HIT domain DUF4921 PF16268.5 gi|407464410|ref|YP_006775292.1| - 8.9e-05 21.5 0.0 0.00014 20.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4921) GalP_UDP_tr_C PF02744.17 gi|407464410|ref|YP_006775292.1| - 0.00025 20.8 0.0 0.00042 20.1 0.0 1.3 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, C-terminal domain DcpS_C PF11969.8 gi|407464410|ref|YP_006775292.1| - 0.1 13.1 0.0 0.23 12.0 0.0 1.6 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme C-term binding DUF2162 PF09930.9 gi|407464411|ref|YP_006775293.1| - 0.00068 19.1 0.5 0.00068 19.1 0.5 1.5 2 0 0 2 2 2 1 Predicted transporter (DUF2162) IncFII_repA PF02387.15 gi|407464411|ref|YP_006775293.1| - 0.011 15.0 0.2 0.014 14.7 0.2 1.1 1 0 0 1 1 1 0 IncFII RepA protein family BDV_G PF06208.11 gi|407464411|ref|YP_006775293.1| - 0.087 12.0 0.1 0.1 11.7 0.1 1.1 1 0 0 1 1 1 0 Borna disease virus G protein DUF3098 PF11297.8 gi|407464411|ref|YP_006775293.1| - 0.13 11.9 10.7 0.36 10.4 0.5 3.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3098) MFS_1 PF07690.16 gi|407464411|ref|YP_006775293.1| - 0.22 10.4 8.0 0.41 9.5 8.1 1.5 1 1 0 1 1 1 0 Major Facilitator Superfamily ThrE PF06738.12 gi|407464411|ref|YP_006775293.1| - 0.26 10.6 8.9 0.023 14.1 4.5 1.4 2 0 0 2 2 2 0 Putative threonine/serine exporter Tetraspanin PF00335.20 gi|407464411|ref|YP_006775293.1| - 1.6 8.4 7.8 6.1 6.5 6.4 2.3 1 1 0 1 1 1 0 Tetraspanin family Phage_holin_3_6 PF07332.11 gi|407464411|ref|YP_006775293.1| - 2 8.5 5.8 0.23 11.5 0.5 2.0 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Acetyltransf_1 PF00583.25 gi|407464412|ref|YP_006775294.1| - 5.4e-18 65.3 0.0 6.2e-18 65.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|407464412|ref|YP_006775294.1| - 1.4e-16 60.5 0.0 1.6e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|407464412|ref|YP_006775294.1| - 1.9e-14 53.8 0.0 2.8e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|407464412|ref|YP_006775294.1| - 1.4e-05 25.2 0.0 1.8e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|407464412|ref|YP_006775294.1| - 0.077 13.1 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase NTP_transferase PF00483.23 gi|407464413|ref|YP_006775295.1| - 1.1e-42 146.3 0.0 1.3e-42 146.1 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|407464413|ref|YP_006775295.1| - 9e-09 35.9 0.0 1.1e-08 35.6 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|407464413|ref|YP_006775295.1| - 0.017 14.9 0.0 0.039 13.7 0.0 1.6 2 0 0 2 2 2 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ThiP_synth PF10120.9 gi|407464414|ref|YP_006775296.1| - 4.6e-54 182.5 0.0 8.7e-54 181.6 0.0 1.5 1 0 0 1 1 1 1 Thiamine-phosphate synthase Phos_pyr_kin PF08543.12 gi|407464414|ref|YP_006775296.1| - 1.5e-27 96.5 2.7 2.5e-27 95.8 1.0 1.8 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 gi|407464414|ref|YP_006775296.1| - 7.9e-09 35.2 0.0 1.3e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_anhydrase PF00194.21 gi|407464414|ref|YP_006775296.1| - 0.0066 16.0 0.5 0.014 14.9 0.5 1.5 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TIMP PF00965.17 gi|407464414|ref|YP_006775296.1| - 0.036 13.9 2.1 1.7 8.4 0.3 2.2 2 0 0 2 2 2 0 Tissue inhibitor of metalloproteinase Carb_kinase PF01256.17 gi|407464414|ref|YP_006775296.1| - 0.058 12.9 0.1 0.096 12.1 0.1 1.4 1 0 0 1 1 1 0 Carbohydrate kinase Phos_pyr_kin PF08543.12 gi|407464415|ref|YP_006775297.1| - 2.1e-27 96.1 0.3 2.3e-27 96.0 0.3 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase CODH_A_N PF18537.1 gi|407464415|ref|YP_006775297.1| - 0.089 12.8 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Carbon monoxide dehydrogenase subunit alpha N-terminal domain DUF1221 PF06760.11 gi|407464416|ref|YP_006775298.1| - 0.0015 18.1 0.0 0.0015 18.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1221) NCD3G PF07562.14 gi|407464416|ref|YP_006775298.1| - 0.082 12.9 2.0 0.14 12.1 2.0 1.5 1 1 1 2 2 2 0 Nine Cysteines Domain of family 3 GPCR zf-CSL PF05207.13 gi|407464416|ref|YP_006775298.1| - 0.13 12.0 3.5 0.12 12.1 1.1 1.9 1 1 1 2 2 2 0 CSL zinc finger zf-C2H2_11 PF16622.5 gi|407464416|ref|YP_006775298.1| - 8 6.3 6.6 6.9 6.5 0.6 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type DUF2205 PF10224.9 gi|407464417|ref|YP_006775299.1| - 0.0026 17.7 2.4 0.37 10.8 0.2 2.2 1 1 1 2 2 2 2 Short coiled-coil protein ThiC_Rad_SAM PF01964.18 gi|407464418|ref|YP_006775300.1| - 1.2e-172 574.4 1.0 1.4e-172 574.2 1.0 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family DUF3006 PF11213.8 gi|407464418|ref|YP_006775300.1| - 0.17 12.1 1.8 10 6.5 0.1 4.0 4 1 1 5 5 5 0 Protein of unknown function (DUF3006) NUDIX PF00293.28 gi|407464419|ref|YP_006775301.1| - 4.3e-13 49.5 0.0 4.7e-13 49.3 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|407464419|ref|YP_006775301.1| - 2.5e-05 24.2 0.0 3.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain PDH PF02153.17 gi|407464420|ref|YP_006775302.1| - 2.9e-24 85.5 0.2 3.4e-24 85.2 0.2 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.15 gi|407464420|ref|YP_006775302.1| - 1e-06 29.0 0.1 6e-06 26.5 0.0 2.1 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|407464420|ref|YP_006775302.1| - 1.9e-05 24.6 1.1 6.1e-05 23.0 0.0 2.2 2 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|407464420|ref|YP_006775302.1| - 2.8e-05 24.6 0.3 0.00021 21.8 0.0 2.6 2 2 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|407464420|ref|YP_006775302.1| - 3.3e-05 23.3 0.0 5.9e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|407464420|ref|YP_006775302.1| - 0.0029 17.6 1.9 3 7.8 0.0 3.3 2 1 1 3 3 3 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CoA_binding_2 PF13380.6 gi|407464420|ref|YP_006775302.1| - 0.014 15.8 0.0 0.22 12.0 0.0 2.3 2 0 0 2 2 2 0 CoA binding domain Semialdhyde_dh PF01118.24 gi|407464420|ref|YP_006775302.1| - 0.014 15.8 0.1 1.5 9.3 0.0 3.0 2 1 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain IlvN PF07991.12 gi|407464420|ref|YP_006775302.1| - 0.016 14.8 0.1 0.051 13.1 0.0 1.9 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Epimerase PF01370.21 gi|407464420|ref|YP_006775302.1| - 0.017 14.6 0.1 0.036 13.5 0.0 1.6 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family DUF2529 PF10740.9 gi|407464420|ref|YP_006775302.1| - 0.022 14.4 0.2 0.62 9.7 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF2529) DpaA_N PF16924.5 gi|407464420|ref|YP_006775302.1| - 0.043 13.9 0.1 0.31 11.2 0.0 2.3 1 1 0 2 2 2 0 Dipicolinate synthase subunit A N-terminal domain Pyr_redox_2 PF07992.14 gi|407464420|ref|YP_006775302.1| - 0.048 12.9 0.4 0.13 11.5 0.0 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase KxDL PF10241.9 gi|407464420|ref|YP_006775302.1| - 0.055 13.7 0.1 0.13 12.5 0.1 1.6 1 0 0 1 1 1 0 Uncharacterized conserved protein DapB_N PF01113.20 gi|407464420|ref|YP_006775302.1| - 0.061 13.5 0.1 0.21 11.7 0.0 2.0 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus DUF1392 PF07154.11 gi|407464420|ref|YP_006775302.1| - 0.086 13.0 0.1 0.23 11.5 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1392) ApbA PF02558.16 gi|407464420|ref|YP_006775302.1| - 0.092 12.4 0.1 1 9.0 0.1 2.3 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA adh_short PF00106.25 gi|407464420|ref|YP_006775302.1| - 0.11 11.9 1.1 6.4 6.2 0.0 2.4 2 0 0 2 2 2 0 short chain dehydrogenase NmrA PF05368.13 gi|407464420|ref|YP_006775302.1| - 0.13 11.8 2.4 0.22 11.1 0.2 2.4 2 1 1 3 3 3 0 NmrA-like family Aminotran_1_2 PF00155.21 gi|407464421|ref|YP_006775303.1| - 9.6e-60 202.7 0.0 1.2e-59 202.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II CM_2 PF01817.21 gi|407464421|ref|YP_006775303.1| - 4.8e-09 36.4 0.9 4.8e-09 36.4 0.9 2.8 4 0 0 4 4 4 1 Chorismate mutase type II Aminotran_5 PF00266.19 gi|407464421|ref|YP_006775303.1| - 1.4e-07 30.8 0.0 2.2e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|407464421|ref|YP_006775303.1| - 1.3e-06 28.0 0.0 2.1e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|407464421|ref|YP_006775303.1| - 3.1e-06 26.0 0.1 4.7e-06 25.4 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.13 gi|407464421|ref|YP_006775303.1| - 0.00021 20.3 1.6 0.00077 18.4 0.1 2.5 3 0 0 3 3 3 1 Allinase LppX_LprAFG PF07161.13 gi|407464421|ref|YP_006775303.1| - 0.0061 16.4 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 LppX_LprAFG lipoprotein SPATA1_C PF15743.5 gi|407464421|ref|YP_006775303.1| - 0.037 14.1 1.5 0.1 12.6 1.5 1.8 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus Beta_elim_lyase PF01212.21 gi|407464421|ref|YP_006775303.1| - 0.091 12.0 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase Chorismate_synt PF01264.21 gi|407464422|ref|YP_006775304.1| - 3.6e-134 446.6 0.3 4.1e-134 446.4 0.3 1.0 1 0 0 1 1 1 1 Chorismate synthase EPSP_synthase PF00275.20 gi|407464423|ref|YP_006775305.1| - 1.2e-101 340.4 0.0 1.6e-101 340.1 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TubC_N PF18563.1 gi|407464423|ref|YP_006775305.1| - 0.0029 17.6 0.3 0.25 11.3 0.0 3.2 3 0 0 3 3 3 1 TubC N-terminal docking domain B5 PF03484.15 gi|407464423|ref|YP_006775305.1| - 0.14 12.5 0.1 1.5 9.2 0.0 2.7 2 1 0 2 2 2 0 tRNA synthetase B5 domain Shikimate_dh_N PF08501.11 gi|407464424|ref|YP_006775306.1| - 3.7e-27 94.4 0.0 1.1e-26 92.9 0.0 1.8 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 gi|407464424|ref|YP_006775306.1| - 2.6e-14 53.4 0.3 4.9e-14 52.6 0.3 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase SDH_C PF18317.1 gi|407464424|ref|YP_006775306.1| - 2.4e-13 49.6 0.0 3.9e-13 48.9 0.0 1.4 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|407464424|ref|YP_006775306.1| - 2.1e-06 28.0 0.4 3.6e-06 27.3 0.4 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|407464424|ref|YP_006775306.1| - 0.00034 21.1 1.2 0.00064 20.2 1.2 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 gi|407464424|ref|YP_006775306.1| - 0.005 17.3 0.1 0.008 16.6 0.1 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding CBAH PF02275.18 gi|407464424|ref|YP_006775306.1| - 0.01 15.5 0.0 0.016 14.9 0.0 1.3 1 0 0 1 1 1 0 Linear amide C-N hydrolases, choloylglycine hydrolase family RcpB PF16971.5 gi|407464424|ref|YP_006775306.1| - 0.013 15.4 0.4 0.022 14.7 0.4 1.3 1 0 0 1 1 1 0 Rough colony protein B, tight adherence - tad - subunit OCD_Mu_crystall PF02423.15 gi|407464424|ref|YP_006775306.1| - 0.023 13.6 0.1 0.034 13.1 0.1 1.1 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family GARS_N PF02844.15 gi|407464424|ref|YP_006775306.1| - 0.09 13.6 0.1 0.25 12.2 0.1 1.8 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, N domain NAD_binding_10 PF13460.6 gi|407464424|ref|YP_006775306.1| - 0.1 12.4 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding DHquinase_I PF01487.15 gi|407464425|ref|YP_006775307.1| - 1.5e-53 182.4 0.0 1.7e-53 182.3 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase DUF5619 PF18505.1 gi|407464425|ref|YP_006775307.1| - 0.15 12.1 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5619) DHQS PF01959.16 gi|407464426|ref|YP_006775308.1| - 6.9e-106 354.1 0.3 8.2e-106 353.9 0.3 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II Glyco_transf_41 PF13844.6 gi|407464426|ref|YP_006775308.1| - 0.12 10.7 0.0 0.21 10.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 41 DUF2529 PF10740.9 gi|407464426|ref|YP_006775308.1| - 0.13 11.9 0.1 0.51 10.0 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF2529) DeoC PF01791.9 gi|407464427|ref|YP_006775309.1| - 1.4e-48 165.6 0.0 1.7e-48 165.3 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase DUF561 PF04481.12 gi|407464427|ref|YP_006775309.1| - 0.13 11.4 0.1 0.25 10.5 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF561) Radical_SAM PF04055.21 gi|407464428|ref|YP_006775310.1| - 1.4e-18 67.9 0.0 2.1e-18 67.2 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily DUF905 PF06006.12 gi|407464428|ref|YP_006775310.1| - 0.079 12.9 0.0 0.36 10.8 0.0 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF905) UbiD PF01977.16 gi|407464429|ref|YP_006775311.1| - 1.2e-155 518.4 0.1 1.4e-155 518.2 0.1 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DUF4751 PF15942.5 gi|407464429|ref|YP_006775311.1| - 0.3 11.0 1.5 0.65 9.9 0.1 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4751) DUF2748 PF10871.8 gi|407464430|ref|YP_006775312.1| - 0.13 10.9 0.1 0.14 10.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2748) Cep57_CLD PF14073.6 gi|407464431|ref|YP_006775313.1| - 0.0047 17.0 13.3 0.0057 16.7 13.3 1.1 1 0 0 1 1 1 1 Centrosome localisation domain of Cep57 CLZ PF16526.5 gi|407464431|ref|YP_006775313.1| - 0.016 15.6 0.8 0.016 15.6 0.8 2.3 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4407 PF14362.6 gi|407464431|ref|YP_006775313.1| - 0.026 13.9 13.8 0.029 13.7 13.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Ribosomal_L29 PF00831.23 gi|407464431|ref|YP_006775313.1| - 0.027 14.4 1.4 0.027 14.4 1.4 2.2 2 1 0 2 2 2 0 Ribosomal L29 protein bZIP_2 PF07716.15 gi|407464431|ref|YP_006775313.1| - 0.059 13.5 2.1 0.059 13.5 2.1 2.3 2 1 1 3 3 3 0 Basic region leucine zipper Lzipper-MIP1 PF14389.6 gi|407464431|ref|YP_006775313.1| - 0.13 12.5 5.4 3.1 8.2 0.6 2.4 2 1 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 HIP1_clath_bdg PF16515.5 gi|407464431|ref|YP_006775313.1| - 0.15 12.7 12.1 1.7 9.3 1.1 2.1 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF3408 PF11888.8 gi|407464431|ref|YP_006775313.1| - 0.3 11.2 11.4 0.054 13.6 7.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3408) Atg14 PF10186.9 gi|407464431|ref|YP_006775313.1| - 0.91 8.5 8.2 1.2 8.1 8.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Striatin PF08232.12 gi|407464431|ref|YP_006775313.1| - 1.4 9.5 13.8 2.1 9.0 13.2 1.4 1 1 1 2 2 2 0 Striatin family YlqD PF11068.8 gi|407464431|ref|YP_006775313.1| - 1.8 8.9 12.8 3.1 8.2 12.9 1.4 1 1 0 1 1 1 0 YlqD protein SUZ PF12752.7 gi|407464431|ref|YP_006775313.1| - 2 9.2 7.4 0.47 11.3 3.8 1.9 2 0 0 2 2 2 0 SUZ domain DASH_Spc19 PF08287.11 gi|407464431|ref|YP_006775313.1| - 2.8 7.8 11.7 3.7 7.4 11.7 1.2 1 0 0 1 1 1 0 Spc19 Spc24 PF08286.11 gi|407464431|ref|YP_006775313.1| - 3.4 8.0 9.3 0.36 11.1 3.4 1.9 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 ALMT PF11744.8 gi|407464431|ref|YP_006775313.1| - 4.5 6.0 5.9 4.8 5.9 5.9 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter IFT20 PF14931.6 gi|407464431|ref|YP_006775313.1| - 5 7.3 10.2 0.67 10.1 1.0 2.2 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 Ax_dynein_light PF10211.9 gi|407464431|ref|YP_006775313.1| - 5.2 7.0 12.5 65 3.4 12.5 2.1 1 1 0 1 1 1 0 Axonemal dynein light chain AAA_13 PF13166.6 gi|407464431|ref|YP_006775313.1| - 5.5 5.5 9.6 6.5 5.3 9.6 1.0 1 0 0 1 1 1 0 AAA domain DUF3138 PF11336.8 gi|407464431|ref|YP_006775313.1| - 6.2 5.3 5.5 6.5 5.3 5.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) FapA PF03961.13 gi|407464431|ref|YP_006775313.1| - 6.4 5.3 8.7 11 4.5 8.7 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A AhpC-TSA PF00578.21 gi|407464432|ref|YP_006775314.1| - 7.4e-39 132.5 0.1 8.5e-39 132.3 0.1 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|407464432|ref|YP_006775314.1| - 1.5e-26 92.9 0.0 1.6e-26 92.8 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 gi|407464432|ref|YP_006775314.1| - 8.8e-08 32.3 0.0 1.1e-07 31.9 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 gi|407464432|ref|YP_006775314.1| - 4.5e-07 29.6 0.0 5.1e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) SCO1-SenC PF02630.14 gi|407464432|ref|YP_006775314.1| - 0.0021 18.0 0.0 0.0032 17.4 0.0 1.3 1 1 0 1 1 1 1 SCO1/SenC MIP PF00230.20 gi|407464433|ref|YP_006775315.1| - 6.8e-53 179.7 20.2 8e-53 179.5 20.2 1.0 1 0 0 1 1 1 1 Major intrinsic protein Ldr_toxin PF13940.6 gi|407464433|ref|YP_006775315.1| - 0.0046 17.0 0.7 0.018 15.1 0.7 2.1 1 0 0 1 1 1 1 Toxin Ldr, type I toxin-antitoxin system Spc29 PF17082.5 gi|407464434|ref|YP_006775316.1| - 0.0014 18.5 5.6 0.014 15.2 5.6 1.9 1 1 0 1 1 1 1 Spindle Pole Component 29 Peptidase_C101 PF16218.5 gi|407464434|ref|YP_006775316.1| - 0.0039 16.5 1.8 0.0044 16.3 1.8 1.1 1 0 0 1 1 1 1 Peptidase family C101 DUF445 PF04286.12 gi|407464434|ref|YP_006775316.1| - 0.044 13.6 3.5 0.046 13.5 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) DUF4962 PF16332.5 gi|407464434|ref|YP_006775316.1| - 0.084 11.4 2.2 0.096 11.2 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4962) DASH_Dad4 PF08650.10 gi|407464434|ref|YP_006775316.1| - 0.089 12.8 2.2 0.55 10.2 0.2 2.5 2 1 0 2 2 2 0 DASH complex subunit Dad4 DUF1400 PF07176.11 gi|407464434|ref|YP_006775316.1| - 0.13 12.5 1.8 0.38 11.0 1.4 1.8 1 1 1 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1400) Noelin-1 PF12308.8 gi|407464434|ref|YP_006775316.1| - 0.35 10.9 2.8 2.4 8.2 0.2 2.3 1 1 1 2 2 2 0 Neurogenesis glycoprotein HSP20 PF00011.21 gi|407464436|ref|YP_006775318.1| - 5.7e-13 48.9 1.1 6.6e-12 45.5 1.1 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|407464436|ref|YP_006775318.1| - 2.6e-11 42.9 0.0 3.6e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA PIH1_CS PF18201.1 gi|407464436|ref|YP_006775318.1| - 3.6e-05 24.1 0.1 4.9e-05 23.7 0.1 1.2 1 0 0 1 1 1 1 PIH1 CS-like domain Fer4_7 PF12838.7 gi|407464437|ref|YP_006775319.1| - 1.4e-09 38.4 3.3 8.7e-05 23.0 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|407464437|ref|YP_006775319.1| - 1.6e-09 37.2 11.8 6.2e-06 25.8 1.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|407464437|ref|YP_006775319.1| - 2.5e-08 33.9 13.5 1.3e-07 31.6 3.6 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|407464437|ref|YP_006775319.1| - 6.3e-08 33.4 3.4 0.00047 21.0 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|407464437|ref|YP_006775319.1| - 4e-07 30.1 5.0 0.00073 19.6 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|407464437|ref|YP_006775319.1| - 4.8e-07 30.1 0.3 0.025 15.0 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|407464437|ref|YP_006775319.1| - 4.9e-07 29.8 7.0 5.3e-06 26.5 7.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|407464437|ref|YP_006775319.1| - 9.5e-06 25.5 12.4 0.013 15.6 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|407464437|ref|YP_006775319.1| - 0.00044 20.4 6.9 0.00058 20.0 5.1 1.9 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|407464437|ref|YP_006775319.1| - 0.0006 20.1 6.2 0.048 14.2 1.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|407464437|ref|YP_006775319.1| - 0.00064 20.2 7.8 0.055 14.0 0.7 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_2 PF12797.7 gi|407464437|ref|YP_006775319.1| - 0.0011 19.0 11.6 0.072 13.2 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|407464437|ref|YP_006775319.1| - 0.0012 19.3 5.5 0.068 13.7 7.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|407464437|ref|YP_006775319.1| - 0.0053 17.6 0.8 3.7 8.5 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|407464437|ref|YP_006775319.1| - 0.23 12.5 16.1 2.3 9.3 1.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|407464437|ref|YP_006775319.1| - 0.33 11.7 11.6 16 6.3 11.0 2.5 1 1 1 2 2 2 0 4Fe-4S single cluster domain DUF4423 PF14394.6 gi|407464438|ref|YP_006775320.1| - 0.00094 18.9 0.0 0.0015 18.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) Regulator_TrmB PF11495.8 gi|407464438|ref|YP_006775320.1| - 0.0036 16.5 0.0 0.016 14.4 0.0 1.8 2 0 0 2 2 2 1 Archaeal transcriptional regulator TrmB HTH_45 PF14947.6 gi|407464438|ref|YP_006775320.1| - 0.0078 16.2 0.6 0.027 14.5 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DUF505 PF04458.12 gi|407464438|ref|YP_006775320.1| - 0.02 13.3 0.0 0.031 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF505) DUF1724 PF08350.10 gi|407464438|ref|YP_006775320.1| - 0.047 13.8 0.4 0.17 12.0 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1724) HTH_20 PF12840.7 gi|407464438|ref|YP_006775320.1| - 0.11 12.6 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4100 PF13352.6 gi|407464439|ref|YP_006775321.1| - 0.0026 17.6 0.1 0.003 17.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4100) zf-ribbon_3 PF13248.6 gi|407464440|ref|YP_006775322.1| - 0.00025 20.3 7.5 0.09 12.2 4.2 2.5 2 1 0 2 2 2 2 zinc-ribbon domain DZR PF12773.7 gi|407464440|ref|YP_006775322.1| - 0.0023 17.9 9.3 0.0067 16.4 9.3 1.8 1 1 0 1 1 1 1 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|407464440|ref|YP_006775322.1| - 0.0086 16.2 6.5 0.027 14.6 6.5 2.1 1 1 0 1 1 1 1 Zinc ribbon domain NOB1_Zn_bind PF08772.11 gi|407464440|ref|YP_006775322.1| - 0.0087 16.2 6.0 0.029 14.5 6.1 1.8 1 1 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 gi|407464440|ref|YP_006775322.1| - 0.014 15.1 9.5 0.59 9.9 2.2 3.0 1 1 2 3 3 3 0 zinc-ribbon domain DUF1272 PF06906.11 gi|407464440|ref|YP_006775322.1| - 0.018 15.1 6.8 0.77 9.9 6.8 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) zinc-ribbons_6 PF07191.12 gi|407464440|ref|YP_006775322.1| - 0.02 14.9 10.9 0.077 13.0 10.9 2.0 1 1 0 1 1 1 0 zinc-ribbons zf-CHY PF05495.12 gi|407464440|ref|YP_006775322.1| - 0.038 14.5 7.1 0.065 13.7 7.1 1.4 1 0 0 1 1 1 0 CHY zinc finger PolC_DP2 PF03833.13 gi|407464440|ref|YP_006775322.1| - 0.067 11.1 6.5 0.065 11.1 6.5 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Nudix_N_2 PF14803.6 gi|407464440|ref|YP_006775322.1| - 0.08 12.9 5.0 9.9 6.2 0.2 3.0 1 1 1 2 2 2 0 Nudix N-terminal UPF0547 PF10571.9 gi|407464440|ref|YP_006775322.1| - 0.085 13.0 11.0 7.1 6.8 7.4 3.0 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 TF_Zn_Ribbon PF08271.12 gi|407464440|ref|YP_006775322.1| - 0.6 9.7 8.2 3.8 7.1 0.1 3.1 2 1 0 2 2 2 0 TFIIB zinc-binding HypA PF01155.19 gi|407464440|ref|YP_006775322.1| - 1.4 9.0 9.7 5.6 7.0 9.2 2.1 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Nop10p PF04135.12 gi|407464440|ref|YP_006775322.1| - 2.1 8.5 4.1 25 5.0 4.1 2.3 1 1 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family zf-C3H2C3 PF17122.5 gi|407464440|ref|YP_006775322.1| - 2.5 8.2 7.9 75 3.5 6.6 2.7 2 1 0 2 2 2 0 Zinc-finger Zn_Tnp_IS1595 PF12760.7 gi|407464440|ref|YP_006775322.1| - 2.9 8.0 9.1 1.7 8.7 0.3 2.6 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-IS66 PF13005.7 gi|407464440|ref|YP_006775322.1| - 3.9 7.9 12.0 3 8.3 0.4 3.0 1 1 2 3 3 3 0 zinc-finger binding domain of transposase IS66 A2L_zn_ribbon PF08792.10 gi|407464440|ref|YP_006775322.1| - 4 7.3 11.1 8.5 6.2 0.4 3.2 1 1 1 3 3 3 0 A2L zinc ribbon domain Ribosomal_L32p PF01783.23 gi|407464440|ref|YP_006775322.1| - 5 7.5 5.6 2.8 8.3 1.0 2.3 1 1 1 2 2 2 0 Ribosomal L32p protein family DNA_RNApol_7kD PF03604.13 gi|407464440|ref|YP_006775322.1| - 5.3 6.8 10.0 75 3.1 3.6 3.0 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|407464440|ref|YP_006775322.1| - 5.6 6.7 11.2 4 7.1 0.7 3.3 1 1 2 3 3 3 0 Ubiquitin-Binding Zinc Finger Rubredoxin_2 PF18073.1 gi|407464440|ref|YP_006775322.1| - 8.4 6.2 10.0 15 5.4 0.5 3.0 3 0 0 3 3 3 0 Rubredoxin metal binding domain YkyA PF10368.9 gi|407464441|ref|YP_006775323.1| - 0.00091 18.9 7.5 0.001 18.8 7.5 1.1 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein TMF_TATA_bd PF12325.8 gi|407464441|ref|YP_006775323.1| - 0.02 15.1 4.8 0.022 15.0 4.8 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding BLOC1_2 PF10046.9 gi|407464441|ref|YP_006775323.1| - 0.053 13.8 5.4 0.063 13.6 5.4 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF2683 PF10884.8 gi|407464441|ref|YP_006775323.1| - 0.068 13.4 4.2 0.078 13.2 4.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2683) OmpH PF03938.14 gi|407464441|ref|YP_006775323.1| - 0.1 13.0 7.3 0.11 12.8 7.3 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Cauli_AT PF03233.13 gi|407464441|ref|YP_006775323.1| - 0.12 12.3 4.2 0.13 12.2 4.2 1.0 1 0 0 1 1 1 0 Aphid transmission protein DUF919 PF06034.11 gi|407464441|ref|YP_006775323.1| - 0.18 11.7 6.4 0.11 12.3 5.1 1.5 1 1 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF919) CHD5 PF04420.14 gi|407464441|ref|YP_006775323.1| - 1.4 8.7 6.8 28 4.5 6.9 1.9 1 1 0 1 1 1 0 CHD5-like protein TMPIT PF07851.13 gi|407464441|ref|YP_006775323.1| - 1.5 8.0 4.9 1.6 7.9 4.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein EMC3_TMCO1 PF01956.16 gi|407464441|ref|YP_006775323.1| - 3.2 7.4 5.9 3.3 7.4 5.9 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF4337 PF14235.6 gi|407464441|ref|YP_006775323.1| - 4.2 7.5 8.3 12 6.0 8.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) SLATT_5 PF18160.1 gi|407464441|ref|YP_006775323.1| - 4.8 6.4 7.0 7.5 5.8 7.0 1.4 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 AAA_23 PF13476.6 gi|407464441|ref|YP_006775323.1| - 5 7.6 10.7 5.4 7.5 10.7 1.1 1 0 0 1 1 1 0 AAA domain Put_DNA-bind_N PF06971.13 gi|407464442|ref|YP_006775324.1| - 0.16 12.0 0.5 0.73 9.9 0.1 2.2 2 0 0 2 2 2 0 Putative DNA-binding protein N-terminus TFIIB PF00382.19 gi|407464443|ref|YP_006775325.1| - 6.4e-38 128.7 8.0 6.9e-19 67.7 0.5 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|407464443|ref|YP_006775325.1| - 2.4e-08 33.4 3.5 3.9e-08 32.7 3.5 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.23 gi|407464443|ref|YP_006775325.1| - 1.8e-06 27.7 1.3 0.0013 18.5 0.4 2.2 2 0 0 2 2 2 2 Cyclin, N-terminal domain Sigma70_r4 PF04545.16 gi|407464443|ref|YP_006775325.1| - 8.2e-05 22.0 3.7 0.027 14.0 0.0 3.0 4 0 0 4 4 2 2 Sigma-70, region 4 Ribosomal_S27e PF01667.17 gi|407464443|ref|YP_006775325.1| - 0.00017 21.2 1.8 0.00035 20.2 1.8 1.4 1 0 0 1 1 1 1 Ribosomal protein S27 HTH_3 PF01381.22 gi|407464443|ref|YP_006775325.1| - 0.001 19.1 0.0 0.16 12.1 0.0 2.8 2 0 0 2 2 2 1 Helix-turn-helix zf-ribbon_3 PF13248.6 gi|407464443|ref|YP_006775325.1| - 0.0012 18.1 4.0 0.027 13.9 4.0 2.4 1 1 0 1 1 1 1 zinc-ribbon domain Cyclin_C PF02984.19 gi|407464443|ref|YP_006775325.1| - 0.0025 17.9 0.6 0.5 10.5 0.1 2.7 1 1 2 3 3 3 1 Cyclin, C-terminal domain HTH_11 PF08279.12 gi|407464443|ref|YP_006775325.1| - 0.013 15.4 0.0 0.013 15.4 0.0 2.7 3 0 0 3 3 3 0 HTH domain HTH_AsnC-type PF13404.6 gi|407464443|ref|YP_006775325.1| - 0.019 14.8 0.6 0.44 10.4 0.0 3.0 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain zinc_ribbon_2 PF13240.6 gi|407464443|ref|YP_006775325.1| - 0.023 14.4 5.3 0.49 10.2 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zf-ISL3 PF14690.6 gi|407464443|ref|YP_006775325.1| - 0.025 15.2 0.4 10 6.8 0.0 2.5 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf_UBZ PF18439.1 gi|407464443|ref|YP_006775325.1| - 0.03 13.9 1.3 1.2 8.8 0.1 2.4 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger C_Hendra PF16821.5 gi|407464443|ref|YP_006775325.1| - 0.032 14.1 0.2 0.078 12.8 0.2 1.6 1 0 0 1 1 1 0 C protein from hendra and measles viruses A2L_zn_ribbon PF08792.10 gi|407464443|ref|YP_006775325.1| - 0.036 13.8 1.2 0.066 13.0 1.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain DZR PF12773.7 gi|407464443|ref|YP_006775325.1| - 0.04 13.9 0.3 0.11 12.6 0.3 1.7 1 0 0 1 1 1 0 Double zinc ribbon YacG PF03884.14 gi|407464443|ref|YP_006775325.1| - 0.061 13.1 0.7 0.12 12.1 0.7 1.5 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG Nudix_N_2 PF14803.6 gi|407464443|ref|YP_006775325.1| - 0.063 13.2 1.6 0.71 9.8 0.2 2.5 2 0 0 2 2 2 0 Nudix N-terminal RB_B PF01857.20 gi|407464443|ref|YP_006775325.1| - 0.065 13.3 0.1 0.12 12.5 0.1 1.6 1 1 0 1 1 1 0 Retinoblastoma-associated protein B domain HTH_Mga PF08280.11 gi|407464443|ref|YP_006775325.1| - 0.076 13.1 2.6 0.25 11.4 0.0 3.0 3 0 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain OrfB_Zn_ribbon PF07282.11 gi|407464443|ref|YP_006775325.1| - 0.085 12.8 0.9 0.3 11.0 0.9 2.0 1 0 0 1 1 1 0 Putative transposase DNA-binding domain HTH_Crp_2 PF13545.6 gi|407464443|ref|YP_006775325.1| - 0.097 12.7 0.2 2.6 8.1 0.0 2.5 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain T3SS_LEE_assoc PF13327.6 gi|407464443|ref|YP_006775325.1| - 0.099 12.7 0.2 1 9.4 0.0 2.2 1 1 1 2 2 2 0 Type III secretion system subunit Lar_restr_allev PF14354.6 gi|407464443|ref|YP_006775325.1| - 0.1 13.0 0.9 0.25 11.7 0.5 1.8 2 0 0 2 2 1 0 Restriction alleviation protein Lar HTH_24 PF13412.6 gi|407464443|ref|YP_006775325.1| - 0.11 12.0 2.2 0.37 10.4 0.1 2.7 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_Tnp_ISL3 PF13542.6 gi|407464443|ref|YP_006775325.1| - 0.14 11.6 0.1 1.8 8.0 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 zf-ACC PF17848.1 gi|407464443|ref|YP_006775325.1| - 0.27 11.3 5.4 0.43 10.7 1.8 2.6 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain GerE PF00196.19 gi|407464443|ref|YP_006775325.1| - 0.32 10.6 3.0 1.6 8.4 0.0 3.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, luxR family Mu-like_Com PF10122.9 gi|407464443|ref|YP_006775325.1| - 0.42 10.1 2.5 0.58 9.6 1.3 1.9 1 1 0 1 1 1 0 Mu-like prophage protein Com NOB1_Zn_bind PF08772.11 gi|407464443|ref|YP_006775325.1| - 0.69 10.1 3.1 22 5.3 3.1 2.9 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like zf-NADH-PPase PF09297.11 gi|407464443|ref|YP_006775325.1| - 1.1 8.9 3.3 62 3.4 3.3 2.5 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain zf-FPG_IleRS PF06827.14 gi|407464443|ref|YP_006775325.1| - 2.1 8.3 5.3 9.9 6.1 5.2 2.1 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS CBS PF00571.28 gi|407464445|ref|YP_006775327.1| - 2.8e-35 120.6 3.7 9.1e-10 38.8 0.0 4.1 4 0 0 4 4 4 4 CBS domain UPF0047 PF01894.17 gi|407464446|ref|YP_006775328.1| - 3.7e-33 114.1 0.0 4.5e-33 113.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 PH_RBD PF12068.8 gi|407464446|ref|YP_006775328.1| - 0.043 13.3 0.0 0.061 12.8 0.0 1.2 1 0 0 1 1 1 0 Rab-binding domain (RBD) DNase-RNase PF02577.14 gi|407464447|ref|YP_006775329.1| - 2.6e-11 43.3 0.0 3.5e-11 42.8 0.0 1.1 1 0 0 1 1 1 1 Bifunctional nuclease BRX PF08381.11 gi|407464448|ref|YP_006775330.1| - 0.033 13.5 0.0 0.061 12.7 0.0 1.5 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 IFS PF16718.5 gi|407464448|ref|YP_006775330.1| - 0.092 12.8 4.1 0.11 12.6 4.1 1.0 1 0 0 1 1 1 0 Immunity factor for SPN FlpD PF02662.16 gi|407464448|ref|YP_006775330.1| - 0.13 12.2 1.7 0.19 11.7 1.6 1.4 1 1 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit Syntaxin_2 PF14523.6 gi|407464448|ref|YP_006775330.1| - 0.2 12.0 4.1 0.24 11.8 4.1 1.2 1 0 0 1 1 1 0 Syntaxin-like protein LacI PF00356.21 gi|407464448|ref|YP_006775330.1| - 0.29 11.0 1.8 13 5.7 0.1 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family DUF5110 PF17137.4 gi|407464449|ref|YP_006775331.1| - 0.11 12.7 0.3 0.31 11.4 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF5110) DUF4520 PF15016.6 gi|407464449|ref|YP_006775331.1| - 0.16 12.0 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4520) Isochorismatase PF00857.20 gi|407464450|ref|YP_006775332.1| - 2.3e-30 106.0 0.0 2.9e-30 105.7 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family LPD3 PF18798.1 gi|407464450|ref|YP_006775332.1| - 0.0014 18.9 0.1 0.0027 17.9 0.1 1.5 1 0 0 1 1 1 1 Large polyvalent protein-associated domain 3 DICT PF10069.9 gi|407464450|ref|YP_006775332.1| - 0.041 13.6 0.1 0.068 12.9 0.1 1.3 1 0 0 1 1 1 0 Sensory domain in DIguanylate Cyclases and Two-component system SNAD2 PF18745.1 gi|407464450|ref|YP_006775332.1| - 0.048 13.4 0.3 0.081 12.6 0.3 1.3 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 2 EIF_2_alpha PF07541.12 gi|407464452|ref|YP_006775334.1| - 0.0049 17.0 0.7 0.0099 16.0 0.3 1.7 1 1 1 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit ArAE_1_C PF11728.8 gi|407464452|ref|YP_006775334.1| - 0.037 14.0 4.1 0.11 12.5 3.1 2.0 1 1 1 2 2 2 0 Putative aromatic acid exporter C-terminal domain CLZ PF16526.5 gi|407464452|ref|YP_006775334.1| - 0.07 13.5 0.2 13 6.3 0.0 2.5 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels CBS PF00571.28 gi|407464453|ref|YP_006775335.1| - 1e-38 131.5 3.8 1.7e-10 41.1 0.1 4.1 4 0 0 4 4 4 4 CBS domain HSP20 PF00011.21 gi|407464455|ref|YP_006775337.1| - 9.5e-15 54.6 0.4 1.2e-14 54.3 0.4 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|407464455|ref|YP_006775337.1| - 4.5e-11 42.1 0.0 6.3e-11 41.7 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|407464455|ref|YP_006775337.1| - 0.00015 22.7 2.3 0.00026 21.9 1.1 1.8 2 0 0 2 2 2 1 CS domain FKBP26_C PF18046.1 gi|407464455|ref|YP_006775337.1| - 0.036 14.1 2.2 2.3 8.4 0.4 2.4 1 1 1 2 2 2 0 FKBP26_C-terminal PIH1_CS PF18201.1 gi|407464455|ref|YP_006775337.1| - 0.061 13.7 0.0 0.16 12.4 0.0 1.8 1 1 0 1 1 1 0 PIH1 CS-like domain DUF1722 PF08349.11 gi|407464455|ref|YP_006775337.1| - 0.068 13.5 0.1 0.16 12.2 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) PAC2 PF09754.9 gi|407464456|ref|YP_006775338.1| - 7.9e-32 111.0 0.0 9.1e-32 110.8 0.0 1.0 1 0 0 1 1 1 1 PAC2 family MADF_DNA_bdg PF10545.9 gi|407464456|ref|YP_006775338.1| - 0.062 13.6 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like Nif11 PF07862.11 gi|407464458|ref|YP_006775340.1| - 0.15 12.4 0.1 3.5 8.0 0.1 2.8 2 1 0 2 2 2 0 Nif11 domain SHOCT PF09851.9 gi|407464458|ref|YP_006775340.1| - 0.8 9.5 8.2 0.087 12.6 3.0 2.2 2 0 0 2 2 2 0 Short C-terminal domain Phage_holin_3_6 PF07332.11 gi|407464459|ref|YP_006775341.1| - 0.0067 16.5 4.4 0.0084 16.1 4.4 1.3 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III DUF4235 PF14019.6 gi|407464459|ref|YP_006775341.1| - 4.7 7.4 9.0 32 4.7 9.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF4235) DLH PF01738.18 gi|407464460|ref|YP_006775342.1| - 3.7e-51 173.7 0.0 4.9e-51 173.3 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Chlorophyllase2 PF12740.7 gi|407464460|ref|YP_006775342.1| - 2.9e-05 23.1 0.0 4.5e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Chlorophyllase PF07224.11 gi|407464460|ref|YP_006775342.1| - 3.1e-05 23.2 0.0 4.2e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase Abhydrolase_1 PF00561.20 gi|407464460|ref|YP_006775342.1| - 0.00027 20.7 0.1 0.00041 20.1 0.1 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|407464460|ref|YP_006775342.1| - 0.00071 19.6 0.2 0.02 14.8 0.0 2.3 1 1 1 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 gi|407464460|ref|YP_006775342.1| - 0.00075 19.0 0.4 0.063 12.7 0.0 2.2 1 1 1 2 2 2 1 Prolyl oligopeptidase family Abhydrolase_5 PF12695.7 gi|407464460|ref|YP_006775342.1| - 0.0075 16.1 0.0 0.12 12.1 0.0 2.1 1 1 1 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|407464460|ref|YP_006775342.1| - 0.027 13.7 0.2 0.68 9.1 0.2 2.0 1 1 1 2 2 2 0 Serine aminopeptidase, S33 ScdA_N PF04405.14 gi|407464460|ref|YP_006775342.1| - 0.18 11.5 0.0 0.45 10.2 0.0 1.6 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) CBS PF00571.28 gi|407464461|ref|YP_006775343.1| - 1.4e-26 92.7 0.7 2.3e-13 50.4 0.1 2.1 2 0 0 2 2 2 2 CBS domain Tox-WTIP PF15654.6 gi|407464462|ref|YP_006775344.1| - 0.047 14.1 0.4 2 8.9 0.0 2.2 1 1 1 2 2 2 0 Toxin with a conserved tryptophan and TIP tripeptide motif Asp4 PF16996.5 gi|407464462|ref|YP_006775344.1| - 8 6.3 6.1 2.6 7.9 2.5 2.0 1 1 1 2 2 2 0 Accessory secretory protein Sec Asp4 Adenine_glyco PF03352.13 gi|407464463|ref|YP_006775345.1| - 7.4e-80 266.9 0.4 9.6e-80 266.5 0.4 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase Ycf70 PF17382.2 gi|407464465|ref|YP_006775347.1| - 0.14 12.6 1.6 7.2 7.1 0.1 3.0 1 1 1 2 2 2 0 Uncharacterized Ycf70-like DUF4231 PF14015.6 gi|407464465|ref|YP_006775347.1| - 6.5 7.3 16.1 2.3 8.7 0.2 3.9 4 0 0 4 4 4 0 Protein of unknown function (DUF4231) Ferritin PF00210.24 gi|407464466|ref|YP_006775348.1| - 3.3e-37 127.6 0.4 3.9e-37 127.4 0.4 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|407464466|ref|YP_006775348.1| - 0.00023 21.6 0.3 0.00044 20.7 0.3 1.6 1 1 0 1 1 1 1 Rubrerythrin Tae4 PF14113.6 gi|407464467|ref|YP_006775349.1| - 0.029 14.6 0.1 0.039 14.2 0.1 1.5 1 1 0 1 1 1 0 Type VI secretion system (T6SS), amidase effector protein 4 LigT_PEase PF02834.16 gi|407464467|ref|YP_006775349.1| - 0.068 13.4 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 LigT like Phosphoesterase DUF3990 PF13151.6 gi|407464469|ref|YP_006775351.1| - 0.039 13.6 0.0 0.054 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3990) Putative_PNPOx PF01243.20 gi|407464471|ref|YP_006775353.1| - 3.6e-16 59.1 0.0 4.5e-16 58.8 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|407464471|ref|YP_006775353.1| - 0.00019 21.1 0.0 0.00024 20.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like DUF447 PF04289.12 gi|407464471|ref|YP_006775353.1| - 0.081 12.7 0.0 0.087 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) EzrA PF06160.12 gi|407464472|ref|YP_006775354.1| - 3.2e-05 22.3 39.8 0.00046 18.5 12.1 3.0 2 1 1 3 3 3 3 Septation ring formation regulator, EzrA TPR_MLP1_2 PF07926.12 gi|407464472|ref|YP_006775354.1| - 0.0012 18.9 46.3 0.0089 16.1 12.7 3.3 2 1 0 3 3 3 1 TPR/MLP1/MLP2-like protein Bap31_Bap29_C PF18035.1 gi|407464472|ref|YP_006775354.1| - 0.0025 17.8 1.4 0.0025 17.8 1.4 5.9 3 3 2 5 5 5 2 Bap31/Bap29 cytoplasmic coiled-coil domain IFT57 PF10498.9 gi|407464472|ref|YP_006775354.1| - 0.0034 16.4 38.9 0.0091 15.0 10.3 3.1 2 1 1 3 3 3 2 Intra-flagellar transport protein 57 Cylicin_N PF15241.6 gi|407464472|ref|YP_006775354.1| - 0.008 16.3 0.6 0.008 16.3 0.6 2.4 2 1 1 3 3 2 1 Cylicin N-terminus ATG16 PF08614.11 gi|407464472|ref|YP_006775354.1| - 0.031 14.5 38.0 1.4 9.1 12.7 3.1 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) Spc7 PF08317.11 gi|407464472|ref|YP_006775354.1| - 0.073 11.9 50.0 1.4 7.7 15.9 3.0 1 1 2 3 3 3 0 Spc7 kinetochore protein FliJ PF02050.16 gi|407464472|ref|YP_006775354.1| - 0.075 13.3 34.3 1 9.6 2.9 3.4 2 1 1 3 3 3 0 Flagellar FliJ protein WEMBL PF05701.11 gi|407464472|ref|YP_006775354.1| - 0.092 11.4 41.7 0.12 11.0 4.5 2.2 2 0 0 2 2 2 0 Weak chloroplast movement under blue light Tektin PF03148.14 gi|407464472|ref|YP_006775354.1| - 0.12 11.1 31.3 0.12 11.1 4.4 3.3 3 0 0 3 3 3 0 Tektin family DUF3584 PF12128.8 gi|407464472|ref|YP_006775354.1| - 0.19 9.2 36.5 0.61 7.5 36.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) CEP63 PF17045.5 gi|407464472|ref|YP_006775354.1| - 0.21 11.4 45.1 1.8 8.4 45.1 1.9 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa DUF745 PF05335.13 gi|407464472|ref|YP_006775354.1| - 0.36 10.5 28.5 0.94 9.2 4.5 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF745) DUF4201 PF13870.6 gi|407464472|ref|YP_006775354.1| - 0.37 10.5 45.2 0.076 12.7 2.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4201) CENP-F_leu_zip PF10473.9 gi|407464472|ref|YP_006775354.1| - 0.42 10.6 57.1 2.4 8.2 9.6 3.2 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF948 PF06103.11 gi|407464472|ref|YP_006775354.1| - 0.55 10.5 16.0 1.3 9.3 0.9 3.8 3 2 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Prp19 PF08606.11 gi|407464472|ref|YP_006775354.1| - 0.63 10.1 0.1 0.63 10.1 0.1 4.5 3 3 1 4 4 4 0 Prp19/Pso4-like MscS_porin PF12795.7 gi|407464472|ref|YP_006775354.1| - 0.72 9.3 28.6 21 4.5 20.9 3.1 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain Laminin_II PF06009.12 gi|407464472|ref|YP_006775354.1| - 0.8 9.7 27.8 2 8.4 5.0 3.3 2 1 0 3 3 3 0 Laminin Domain II Sec2p PF06428.11 gi|407464472|ref|YP_006775354.1| - 0.94 9.5 39.1 0.049 13.6 9.3 3.8 3 1 0 3 3 3 0 GDP/GTP exchange factor Sec2p LPP PF04728.13 gi|407464472|ref|YP_006775354.1| - 1.1 9.6 13.9 6.8 7.2 1.1 4.1 3 1 1 4 4 4 0 Lipoprotein leucine-zipper GrpE PF01025.19 gi|407464472|ref|YP_006775354.1| - 1.4 8.5 47.4 0.95 9.1 9.6 4.2 2 1 2 4 4 4 0 GrpE TMF_TATA_bd PF12325.8 gi|407464472|ref|YP_006775354.1| - 1.8 8.8 46.8 0.97 9.7 8.8 4.1 2 1 2 4 4 4 0 TATA element modulatory factor 1 TATA binding DUF1664 PF07889.12 gi|407464472|ref|YP_006775354.1| - 2 8.5 29.7 1.7 8.7 5.8 3.9 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) Fez1 PF06818.15 gi|407464472|ref|YP_006775354.1| - 2.5 8.5 43.3 1.8e+04 -5.7 41.4 2.9 1 1 0 1 1 0 0 Fez1 Myb_DNA-bind_3 PF12776.7 gi|407464472|ref|YP_006775354.1| - 2.5 9.1 10.9 24 6.0 2.2 3.4 2 1 1 3 3 3 0 Myb/SANT-like DNA-binding domain TelA PF05816.11 gi|407464472|ref|YP_006775354.1| - 2.5 7.1 31.6 1.3 8.0 2.6 3.2 1 1 1 3 3 3 0 Toxic anion resistance protein (TelA) DUF4407 PF14362.6 gi|407464472|ref|YP_006775354.1| - 2.7 7.2 26.7 3.5 6.9 14.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) HJURP_C PF12347.8 gi|407464472|ref|YP_006775354.1| - 3.4 7.8 8.6 0.16 12.0 0.6 2.7 3 0 0 3 3 2 0 Holliday junction regulator protein family C-terminal repeat PI_PP_I PF18363.1 gi|407464472|ref|YP_006775354.1| - 4.6 7.5 11.0 0.15 12.2 0.7 2.9 2 1 1 3 3 2 0 Phosphoinositide phosphatase insertion domain Spectrin PF00435.21 gi|407464472|ref|YP_006775354.1| - 5.4 7.6 29.9 6.7 7.3 7.2 3.5 2 1 0 3 3 3 0 Spectrin repeat Flagellin_C PF00700.21 gi|407464472|ref|YP_006775354.1| - 5.5 7.4 8.6 12 6.3 0.5 2.9 3 0 0 3 3 3 0 Bacterial flagellin C-terminal helical region FlaC_arch PF05377.11 gi|407464472|ref|YP_006775354.1| - 5.8 7.4 38.2 2.1 8.8 3.8 5.8 2 2 3 5 5 5 0 Flagella accessory protein C (FlaC) DUF5082 PF16888.5 gi|407464472|ref|YP_006775354.1| - 6.4 7.1 35.2 0.76 10.1 2.1 3.4 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) MPS2 PF17060.5 gi|407464472|ref|YP_006775354.1| - 7.1 5.8 32.5 70 2.5 19.5 2.2 1 1 1 2 2 2 0 Monopolar spindle protein 2 NAPRTase_N PF17767.1 gi|407464472|ref|YP_006775354.1| - 7.5 7.0 13.1 2.6 8.5 2.9 2.9 2 1 1 3 3 3 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HIP1_clath_bdg PF16515.5 gi|407464472|ref|YP_006775354.1| - 8.5 7.1 46.1 5.6 7.6 8.4 4.0 1 1 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 RmuC PF02646.16 gi|407464472|ref|YP_006775354.1| - 9.6 5.2 29.3 0.67 9.0 1.6 3.7 2 1 2 4 4 4 0 RmuC family SLATT_1 PF18181.1 gi|407464472|ref|YP_006775354.1| - 9.9 6.1 15.2 3.4 7.6 0.3 4.3 2 1 2 4 4 4 0 SMODS and SLOG-associating 2TM effector domain 1 DUF202 PF02656.15 gi|407464473|ref|YP_006775355.1| - 0.44 11.0 5.7 1.6 9.2 6.5 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF202) tRNA-synt_1f PF01921.18 gi|407464474|ref|YP_006775356.1| - 7e-109 364.0 0.0 1.1e-108 363.4 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|407464474|ref|YP_006775356.1| - 0.0071 15.1 0.6 0.077 11.7 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (M) PolyA_pol_RNAbd PF12627.7 gi|407464474|ref|YP_006775356.1| - 0.026 14.3 0.0 0.063 13.1 0.0 1.7 1 0 0 1 1 1 0 Probable RNA and SrmB- binding site of polymerase A tRNA-synt_1 PF00133.22 gi|407464474|ref|YP_006775356.1| - 0.092 11.0 0.0 0.14 10.4 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) Thioredoxin_3 PF13192.6 gi|407464474|ref|YP_006775356.1| - 0.28 11.2 1.0 1.1 9.4 0.3 2.3 2 0 0 2 2 2 0 Thioredoxin domain Radical_SAM_C PF16199.5 gi|407464475|ref|YP_006775357.1| - 7e-27 93.3 0.7 1.8e-26 91.9 0.2 2.0 2 0 0 2 2 2 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|407464475|ref|YP_006775357.1| - 2.7e-20 73.4 0.0 8.5e-20 71.8 0.0 1.8 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|407464475|ref|YP_006775357.1| - 4e-07 30.3 0.1 1.1e-06 28.9 0.1 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|407464475|ref|YP_006775357.1| - 3.3e-06 27.0 0.1 7.9e-06 25.8 0.1 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain HC2 PF07382.11 gi|407464476|ref|YP_006775358.1| - 0.0014 18.8 62.9 0.0019 18.3 62.9 1.1 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 Endostatin PF06482.11 gi|407464476|ref|YP_006775358.1| - 1.9 7.9 10.6 6.3 6.2 8.9 1.9 2 0 0 2 2 2 0 Collagenase NC10 and Endostatin Na_H_Exchanger PF00999.21 gi|407464477|ref|YP_006775359.1| - 2.6e-60 204.2 51.8 3.4e-60 203.9 51.8 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Rab5ip PF07019.12 gi|407464477|ref|YP_006775359.1| - 0.091 13.4 0.0 0.091 13.4 0.0 3.8 3 2 1 4 4 4 0 Rab5-interacting protein (Rab5ip) PspB PF06667.12 gi|407464477|ref|YP_006775359.1| - 0.096 12.8 0.1 0.096 12.8 0.1 2.3 2 0 0 2 2 2 0 Phage shock protein B AIRS_C PF02769.22 gi|407464478|ref|YP_006775360.1| - 4.6e-25 88.6 0.0 8.8e-25 87.6 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|407464478|ref|YP_006775360.1| - 1.8e-15 57.4 1.9 3.5e-15 56.4 1.9 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain PAC2 PF09754.9 gi|407464479|ref|YP_006775361.1| - 1.3e-38 133.1 0.0 1.5e-38 132.9 0.0 1.0 1 0 0 1 1 1 1 PAC2 family DUF3410 PF11890.8 gi|407464479|ref|YP_006775361.1| - 0.068 13.0 0.1 0.12 12.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) DUF21 PF01595.20 gi|407464480|ref|YP_006775362.1| - 3.9e-43 147.2 0.6 5.6e-43 146.7 0.6 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 gi|407464480|ref|YP_006775362.1| - 9.2e-17 61.2 1.2 7.3e-08 32.7 0.3 2.5 2 0 0 2 2 2 2 CBS domain ATPase_2 PF01637.18 gi|407464480|ref|YP_006775362.1| - 0.31 10.9 4.5 0.41 10.5 4.2 1.4 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea Usp PF00582.26 gi|407464481|ref|YP_006775363.1| - 1.5e-23 83.9 0.0 1.9e-23 83.6 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family DUF4364 PF14277.6 gi|407464482|ref|YP_006775364.1| - 0.0044 16.8 0.1 0.0083 15.9 0.1 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_45 PF14947.6 gi|407464482|ref|YP_006775364.1| - 0.014 15.4 0.3 0.021 14.8 0.3 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix HMG-CoA_red PF00368.18 gi|407464482|ref|YP_006775364.1| - 0.088 11.8 0.0 0.096 11.7 0.0 1.1 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A reductase Na_Ca_ex PF01699.24 gi|407464483|ref|YP_006775365.1| - 2.1e-42 144.6 41.9 4.6e-23 81.8 19.4 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Claudin_2 PF13903.6 gi|407464483|ref|YP_006775365.1| - 0.028 14.2 0.2 0.028 14.2 0.2 2.6 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction NDUF_B12 PF08122.12 gi|407464483|ref|YP_006775365.1| - 2 8.5 4.0 14 5.8 0.0 3.3 4 0 0 4 4 4 0 NADH-ubiquinone oxidoreductase B12 subunit family PmbA_TldD PF01523.16 gi|407464484|ref|YP_006775366.1| - 1.8e-43 149.4 1.1 2.5e-43 148.9 1.1 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Radical_SAM PF04055.21 gi|407464485|ref|YP_006775367.1| - 1.2e-19 71.4 0.4 2.1e-19 70.5 0.2 1.5 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|407464485|ref|YP_006775367.1| - 0.043 13.9 0.5 0.15 12.2 0.1 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|407464486|ref|YP_006775368.1| - 1.6e-12 48.1 0.0 2.5e-12 47.5 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SpoU_sub_bind PF08032.12 gi|407464486|ref|YP_006775368.1| - 0.051 13.9 0.1 10 6.5 0.0 3.0 1 1 1 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding Methyltransf_18 PF12847.7 gi|407464486|ref|YP_006775368.1| - 0.12 12.3 0.0 0.32 10.9 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain CdvA PF18822.1 gi|407464486|ref|YP_006775368.1| - 0.76 9.6 7.1 2.6 7.9 0.0 4.0 5 0 0 5 5 5 0 CdvA-like coiled-coil domain Trypsin_2 PF13365.6 gi|407464487|ref|YP_006775369.1| - 2.4e-34 119.4 0.3 4e-34 118.7 0.3 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 gi|407464487|ref|YP_006775369.1| - 2.5e-13 50.4 0.1 6.3e-13 49.0 0.1 1.6 1 1 0 1 1 1 1 Trypsin PDZ_2 PF13180.6 gi|407464487|ref|YP_006775369.1| - 1.3e-12 47.9 1.0 3.7e-12 46.4 1.0 1.9 1 1 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 gi|407464487|ref|YP_006775369.1| - 8.1e-06 25.6 3.7 0.015 15.1 0.3 3.0 3 0 0 3 3 3 2 PDZ domain PDZ PF00595.24 gi|407464487|ref|YP_006775369.1| - 0.005 17.2 4.5 0.6 10.5 0.1 3.0 3 0 0 3 3 3 2 PDZ domain Peptidase_S29 PF02907.15 gi|407464487|ref|YP_006775369.1| - 0.0067 16.2 0.1 0.013 15.2 0.1 1.5 1 0 0 1 1 1 1 Hepatitis C virus NS3 protease Peptidase_S46 PF10459.9 gi|407464487|ref|YP_006775369.1| - 0.008 14.9 1.2 0.024 13.3 0.3 1.8 2 0 0 2 2 2 1 Peptidase S46 Peptidase_S32 PF05579.13 gi|407464487|ref|YP_006775369.1| - 0.018 14.2 2.2 1.5 7.9 0.1 2.2 2 0 0 2 2 2 0 Equine arteritis virus serine endopeptidase S32 Peptidase_S7 PF00949.21 gi|407464487|ref|YP_006775369.1| - 0.035 13.9 0.5 0.078 12.8 0.5 1.6 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease Tricorn_PDZ PF14685.6 gi|407464487|ref|YP_006775369.1| - 0.04 13.9 0.2 0.11 12.4 0.2 1.7 1 0 0 1 1 1 0 Tricorn protease PDZ domain DUF31 PF01732.16 gi|407464487|ref|YP_006775369.1| - 4.2 6.8 6.1 22 4.5 0.3 2.9 2 1 1 3 3 3 0 Putative peptidase (DUF31) Glycos_transf_2 PF00535.26 gi|407464488|ref|YP_006775370.1| - 3.5e-27 95.3 0.0 4.8e-27 94.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|407464488|ref|YP_006775370.1| - 2.7e-16 60.2 0.0 3.6e-16 59.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|407464488|ref|YP_006775370.1| - 3.5e-11 42.9 0.0 7.2e-11 41.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 gi|407464488|ref|YP_006775370.1| - 3.5e-06 26.7 0.0 5.2e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|407464488|ref|YP_006775370.1| - 0.00025 21.5 0.0 0.00046 20.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|407464488|ref|YP_006775370.1| - 0.04 13.8 0.1 0.063 13.2 0.1 1.4 1 0 0 1 1 1 0 Glycosyl transferase family group 2 Polyketide_cyc2 PF10604.9 gi|407464489|ref|YP_006775371.1| - 7.8e-10 39.2 0.0 8.6e-10 39.0 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|407464489|ref|YP_006775371.1| - 6.2e-07 29.7 0.1 8.7e-07 29.2 0.1 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF1857 PF08982.11 gi|407464489|ref|YP_006775371.1| - 0.018 14.9 0.1 0.02 14.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1857) tRNA_bind PF01588.20 gi|407464491|ref|YP_006775373.1| - 4e-21 74.9 0.0 4.5e-21 74.8 0.0 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain TBP PF00352.21 gi|407464492|ref|YP_006775374.1| - 2.8e-54 181.0 0.0 5.5e-27 93.5 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|407464492|ref|YP_006775374.1| - 3.8e-08 33.3 0.0 0.00033 20.7 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) Arfaptin PF06456.13 gi|407464492|ref|YP_006775374.1| - 0.11 12.1 0.2 0.93 9.0 0.1 2.0 2 0 0 2 2 2 0 Arfaptin-like domain DUF1512 PF07431.12 gi|407464493|ref|YP_006775375.1| - 2.6e-128 428.0 8.1 2.9e-128 427.8 8.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1512) CcmH PF03918.14 gi|407464493|ref|YP_006775375.1| - 0.017 14.4 0.1 3.5 6.9 0.0 2.3 2 0 0 2 2 2 0 Cytochrome C biogenesis protein FmrO PF07091.11 gi|407464493|ref|YP_006775375.1| - 0.084 12.4 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) zf-ACC PF17848.1 gi|407464494|ref|YP_006775376.1| - 0.029 14.4 6.3 0.9 9.7 1.1 2.5 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Nudix_N_2 PF14803.6 gi|407464494|ref|YP_006775376.1| - 0.068 13.1 1.4 0.15 12.0 0.1 1.9 2 0 0 2 2 2 0 Nudix N-terminal zf-RanBP PF00641.18 gi|407464494|ref|YP_006775376.1| - 0.11 11.8 5.2 0.22 10.8 0.2 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Zn-ribbon_8 PF09723.10 gi|407464494|ref|YP_006775376.1| - 0.2 11.8 2.0 0.67 10.1 2.0 1.8 1 1 1 2 2 2 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|407464494|ref|YP_006775376.1| - 0.43 10.6 4.2 0.82 9.6 4.2 1.5 1 1 0 1 1 1 0 Putative transposase DNA-binding domain RecR PF02132.15 gi|407464494|ref|YP_006775376.1| - 0.45 10.1 3.5 2.8 7.6 3.5 2.0 1 1 0 1 1 1 0 RecR protein Auto_anti-p27 PF06677.12 gi|407464495|ref|YP_006775377.1| - 0.00027 21.0 1.2 0.00034 20.7 1.2 1.1 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-TFIIB PF13453.6 gi|407464495|ref|YP_006775377.1| - 0.0016 17.7 3.6 0.026 13.9 0.2 2.1 2 0 0 2 2 2 1 Transcription factor zinc-finger Lar_restr_allev PF14354.6 gi|407464495|ref|YP_006775377.1| - 0.0021 18.4 1.6 0.0025 18.2 1.6 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar RNA_POL_M_15KD PF02150.16 gi|407464495|ref|YP_006775377.1| - 0.0029 17.5 4.6 0.16 11.9 0.1 2.1 1 1 1 2 2 2 2 RNA polymerases M/15 Kd subunit zf-C4_Topoisom PF01396.19 gi|407464495|ref|YP_006775377.1| - 0.0042 16.8 2.3 0.036 13.8 0.2 2.1 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger zinc_ribbon_10 PF10058.9 gi|407464495|ref|YP_006775377.1| - 0.0043 16.7 1.9 0.0088 15.8 1.9 1.5 1 1 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein RecR PF02132.15 gi|407464495|ref|YP_006775377.1| - 0.0074 15.8 0.7 0.014 14.9 0.7 1.5 1 1 0 1 1 1 1 RecR protein DUF4379 PF14311.6 gi|407464495|ref|YP_006775377.1| - 0.024 15.0 2.7 0.066 13.6 0.2 2.0 2 0 0 2 2 2 0 Probable Zinc-ribbon domain zf-IS66 PF13005.7 gi|407464495|ref|YP_006775377.1| - 0.027 14.8 3.2 0.044 14.2 0.2 2.0 1 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-ISL3 PF14690.6 gi|407464495|ref|YP_006775377.1| - 0.045 14.4 3.5 1.5 9.6 0.1 2.0 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn-ribbon_8 PF09723.10 gi|407464495|ref|YP_006775377.1| - 0.07 13.3 3.8 0.45 10.7 0.5 2.1 1 1 1 2 2 2 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|407464495|ref|YP_006775377.1| - 0.075 12.8 4.6 0.62 9.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_9 PF14369.6 gi|407464495|ref|YP_006775377.1| - 0.079 13.2 3.6 4.3 7.7 0.1 2.1 1 1 1 2 2 2 0 zinc-ribbon zf-RanBP PF00641.18 gi|407464495|ref|YP_006775377.1| - 0.093 12.1 4.0 0.35 10.2 0.6 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-NADH-PPase PF09297.11 gi|407464495|ref|YP_006775377.1| - 0.096 12.4 4.8 0.27 10.9 0.4 2.0 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf_UBZ PF18439.1 gi|407464495|ref|YP_006775377.1| - 0.097 12.3 1.5 6 6.6 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger OrfB_Zn_ribbon PF07282.11 gi|407464495|ref|YP_006775377.1| - 0.11 12.4 1.0 0.13 12.2 1.0 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain HscB_4_cys PF18256.1 gi|407464495|ref|YP_006775377.1| - 0.12 12.2 4.6 0.19 11.5 4.6 1.3 1 1 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif NADH-G_4Fe-4S_3 PF10588.9 gi|407464495|ref|YP_006775377.1| - 0.12 11.9 0.3 0.34 10.5 0.0 1.7 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region zf-FPG_IleRS PF06827.14 gi|407464495|ref|YP_006775377.1| - 0.12 12.2 6.0 1.7 8.6 6.0 2.0 1 1 0 1 1 1 0 Zinc finger found in FPG and IleRS zf-C2H2_3 PF13878.6 gi|407464495|ref|YP_006775377.1| - 0.13 12.1 2.7 1.7 8.5 0.1 2.1 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-H2C2_2 PF13465.6 gi|407464495|ref|YP_006775377.1| - 0.18 12.3 4.6 0.61 10.6 0.5 2.1 2 0 0 2 2 2 0 Zinc-finger double domain Rubredoxin PF00301.20 gi|407464495|ref|YP_006775377.1| - 0.38 10.8 6.8 0.28 11.2 1.0 2.1 1 1 1 2 2 2 0 Rubredoxin zf_C2H2_10 PF18414.1 gi|407464495|ref|YP_006775377.1| - 0.62 9.6 4.2 3 7.4 0.4 2.1 2 0 0 2 2 2 0 C2H2 type zinc-finger zf-tcix PF14952.6 gi|407464495|ref|YP_006775377.1| - 1.3 8.6 6.3 0.36 10.5 1.2 2.0 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Prim_Zn_Ribbon PF08273.12 gi|407464495|ref|YP_006775377.1| - 1.4 9.2 10.4 13 6.2 10.4 2.0 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase DUF1610 PF07754.11 gi|407464495|ref|YP_006775377.1| - 2 8.5 8.6 5.5 7.1 3.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Peptidase_M24 PF00557.24 gi|407464496|ref|YP_006775378.1| - 7.4e-34 117.3 0.0 8.6e-34 117.1 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 CARD PF00619.21 gi|407464496|ref|YP_006775378.1| - 0.036 14.1 0.1 0.2 11.7 0.0 2.0 1 1 1 2 2 2 0 Caspase recruitment domain ApbE PF02424.15 gi|407464496|ref|YP_006775378.1| - 0.055 13.0 0.1 0.074 12.6 0.1 1.2 1 0 0 1 1 1 0 ApbE family DZR PF12773.7 gi|407464497|ref|YP_006775379.1| - 0.0048 16.9 0.9 0.0057 16.7 0.9 1.1 1 0 0 1 1 1 1 Double zinc ribbon zf-C3HC4_3 PF13920.6 gi|407464497|ref|YP_006775379.1| - 0.019 14.8 0.5 0.024 14.5 0.5 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) AA_permease_C PF13906.6 gi|407464497|ref|YP_006775379.1| - 0.3 11.2 3.3 0.4 10.8 3.3 1.2 1 0 0 1 1 1 0 C-terminus of AA_permease DivIC PF04977.15 gi|407464498|ref|YP_006775380.1| - 0.00028 20.6 3.1 0.00048 19.8 3.1 1.4 1 0 0 1 1 1 1 Septum formation initiator KASH_CCD PF14662.6 gi|407464498|ref|YP_006775380.1| - 0.00037 20.4 1.6 0.00051 19.9 1.6 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DUF5595 PF18077.1 gi|407464498|ref|YP_006775380.1| - 0.0012 18.9 4.7 0.0018 18.3 4.3 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF5595) Tropomyosin_1 PF12718.7 gi|407464498|ref|YP_006775380.1| - 0.0029 17.8 7.3 0.0029 17.8 7.3 1.8 1 1 1 2 2 2 1 Tropomyosin like HMMR_C PF15908.5 gi|407464498|ref|YP_006775380.1| - 0.003 17.9 0.7 0.0038 17.5 0.7 1.3 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor C-terminal Cnn_1N PF07989.11 gi|407464498|ref|YP_006775380.1| - 0.0094 16.1 8.0 0.021 15.0 6.1 2.0 1 1 1 2 2 2 1 Centrosomin N-terminal motif 1 Syntaxin-6_N PF09177.11 gi|407464498|ref|YP_006775380.1| - 0.016 15.7 1.0 0.024 15.2 1.0 1.4 1 0 0 1 1 1 0 Syntaxin 6, N-terminal bZIP_1 PF00170.21 gi|407464498|ref|YP_006775380.1| - 0.021 14.9 3.4 0.032 14.3 3.4 1.3 1 0 0 1 1 1 0 bZIP transcription factor bZIP_2 PF07716.15 gi|407464498|ref|YP_006775380.1| - 0.024 14.7 5.8 0.054 13.6 5.8 1.7 1 0 0 1 1 1 0 Basic region leucine zipper SUIM_assoc PF16619.5 gi|407464498|ref|YP_006775380.1| - 0.034 14.2 0.0 0.054 13.6 0.0 1.4 1 1 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 IFP_35_N PF07334.13 gi|407464498|ref|YP_006775380.1| - 0.071 13.2 4.2 0.15 12.2 4.2 1.6 1 0 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus TPD52 PF04201.15 gi|407464498|ref|YP_006775380.1| - 0.14 11.8 4.3 0.2 11.3 3.9 1.5 1 1 0 1 1 1 0 Tumour protein D52 family DUF4094 PF13334.6 gi|407464498|ref|YP_006775380.1| - 0.18 12.2 3.1 0.26 11.7 3.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) FlaC_arch PF05377.11 gi|407464498|ref|YP_006775380.1| - 0.25 11.7 5.0 0.45 11.0 5.0 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF5320 PF17253.2 gi|407464498|ref|YP_006775380.1| - 0.39 11.8 1.0 0.57 11.3 1.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5320) Pox_A_type_inc PF04508.12 gi|407464498|ref|YP_006775380.1| - 0.52 10.3 4.2 1.1 9.2 4.2 1.6 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat APG6_N PF17675.1 gi|407464498|ref|YP_006775380.1| - 1 9.9 13.5 1.7 9.2 13.5 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF4446 PF14584.6 gi|407464498|ref|YP_006775380.1| - 1 9.3 6.2 0.55 10.2 3.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Metal_resist PF13801.6 gi|407464499|ref|YP_006775381.1| - 0.49 10.6 19.9 0.38 10.9 1.5 3.9 1 1 3 4 4 4 0 Heavy-metal resistance MG2 PF01835.19 gi|407464500|ref|YP_006775382.1| - 8.8e-26 90.2 0.2 4.7e-05 23.8 0.0 7.7 7 1 0 7 7 7 6 MG2 domain LTD PF00932.19 gi|407464500|ref|YP_006775382.1| - 9.7e-16 58.1 0.8 4.6e-15 55.9 0.4 2.5 2 0 0 2 2 2 1 Lamin Tail Domain Big_3 PF07523.12 gi|407464500|ref|YP_006775382.1| - 0.039 14.2 5.8 8.6 6.8 0.1 5.7 6 0 0 6 6 6 0 Bacterial Ig-like domain (group 3) Arrestin_C PF02752.22 gi|407464500|ref|YP_006775382.1| - 3.7 8.0 10.1 28 5.2 0.0 6.1 8 0 0 8 8 8 0 Arrestin (or S-antigen), C-terminal domain Ribo_biogen_C PF04034.13 gi|407464501|ref|YP_006775383.1| - 1.2e-39 134.9 0.0 1.6e-39 134.5 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|407464501|ref|YP_006775383.1| - 1.9e-07 30.8 0.1 3e-07 30.1 0.1 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI SBP_bac_5 PF00496.22 gi|407464502|ref|YP_006775384.1| - 7.3e-26 91.0 13.6 5.3e-23 81.6 0.0 3.3 3 1 0 3 3 3 2 Bacterial extracellular solute-binding proteins, family 5 Middle Mrr_cat PF04471.12 gi|407464503|ref|YP_006775385.1| - 0.011 15.8 0.0 0.017 15.1 0.0 1.3 1 0 0 1 1 1 0 Restriction endonuclease NERD PF08378.11 gi|407464503|ref|YP_006775385.1| - 0.018 15.5 0.0 0.03 14.8 0.0 1.4 1 0 0 1 1 1 0 Nuclease-related domain Hjc PF01870.18 gi|407464503|ref|YP_006775385.1| - 0.044 13.8 0.0 0.076 13.0 0.0 1.4 1 0 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) DUF2070 PF09843.9 gi|407464504|ref|YP_006775386.1| - 4.8e-123 411.4 0.3 6e-123 411.1 0.3 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) MapZ_C2 PF18708.1 gi|407464504|ref|YP_006775386.1| - 0.12 12.6 0.0 0.34 11.2 0.0 1.7 1 0 0 1 1 1 0 MapZ extracellular C-terminal domain 2 Sec61_beta PF03911.16 gi|407464505|ref|YP_006775387.1| - 7.5e-13 48.3 0.2 8.4e-13 48.1 0.2 1.1 1 0 0 1 1 1 1 Sec61beta family Auto_anti-p27 PF06677.12 gi|407464506|ref|YP_006775388.1| - 2.3e-11 43.7 3.1 3.6e-11 43.0 3.1 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF1178 PF06676.11 gi|407464506|ref|YP_006775388.1| - 0.0082 16.5 1.1 0.0091 16.4 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1178) TF_Zn_Ribbon PF08271.12 gi|407464506|ref|YP_006775388.1| - 0.04 13.4 0.4 0.075 12.6 0.4 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding DUF2318 PF10080.9 gi|407464506|ref|YP_006775388.1| - 0.048 13.8 0.4 0.062 13.4 0.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) DUF2813 PF11398.8 gi|407464506|ref|YP_006775388.1| - 0.063 12.5 3.4 0.073 12.3 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) TIP120 PF08623.10 gi|407464506|ref|YP_006775388.1| - 0.079 12.7 2.9 0.091 12.5 2.9 1.1 1 0 0 1 1 1 0 TATA-binding protein interacting (TIP20) SUI1 PF01253.22 gi|407464507|ref|YP_006775389.1| - 2.5e-18 66.3 0.1 3.6e-18 65.9 0.1 1.2 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.15 gi|407464507|ref|YP_006775389.1| - 0.017 14.9 0.1 0.017 14.8 0.1 1.1 1 0 0 1 1 1 0 DTW domain CPBP PF02517.16 gi|407464508|ref|YP_006775390.1| - 1e-09 38.7 18.2 6.2e-09 36.1 18.2 2.4 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease TFIIB PF00382.19 gi|407464509|ref|YP_006775391.1| - 2.9e-36 123.3 4.7 1.5e-18 66.6 1.1 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|407464509|ref|YP_006775391.1| - 3.6e-11 42.4 2.5 6.3e-11 41.6 2.5 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|407464509|ref|YP_006775391.1| - 0.00032 20.1 0.0 0.17 11.5 0.0 2.8 2 0 0 2 2 2 1 Sigma-70, region 4 Cyclin_C PF02984.19 gi|407464509|ref|YP_006775391.1| - 0.0028 17.7 0.0 1.5 8.9 0.0 2.2 2 0 0 2 2 2 2 Cyclin, C-terminal domain Cyclin_N PF00134.23 gi|407464509|ref|YP_006775391.1| - 0.0036 17.0 0.1 0.041 13.6 0.0 2.1 2 0 0 2 2 2 1 Cyclin, N-terminal domain Ribosomal_S27 PF01599.19 gi|407464509|ref|YP_006775391.1| - 0.0037 17.4 1.2 0.0083 16.3 1.2 1.6 1 0 0 1 1 1 1 Ribosomal protein S27a HTH_AsnC-type PF13404.6 gi|407464509|ref|YP_006775391.1| - 0.0066 16.3 0.1 0.27 11.1 0.0 2.7 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain RPW8 PF05659.11 gi|407464509|ref|YP_006775391.1| - 0.0097 15.6 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 1 Arabidopsis broad-spectrum mildew resistance protein RPW8 zf-ribbon_3 PF13248.6 gi|407464509|ref|YP_006775391.1| - 0.03 13.7 4.7 0.27 10.7 4.7 2.2 1 1 0 1 1 1 0 zinc-ribbon domain RB_B PF01857.20 gi|407464509|ref|YP_006775391.1| - 0.038 14.0 0.0 0.076 13.1 0.0 1.5 1 1 0 1 1 1 0 Retinoblastoma-associated protein B domain zf-CCHC_5 PF14787.6 gi|407464509|ref|YP_006775391.1| - 0.055 13.2 1.0 0.055 13.2 1.0 2.3 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger TPR_5 PF12688.7 gi|407464509|ref|YP_006775391.1| - 0.1 12.8 1.6 0.25 11.6 0.2 2.2 2 1 0 2 2 2 0 Tetratrico peptide repeat LacI PF00356.21 gi|407464509|ref|YP_006775391.1| - 0.23 11.3 1.8 1.7 8.5 0.2 2.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family MerR PF00376.23 gi|407464509|ref|YP_006775391.1| - 0.26 11.1 0.9 2.6 7.9 0.0 2.7 3 0 0 3 3 3 0 MerR family regulatory protein HTH_36 PF13730.6 gi|407464509|ref|YP_006775391.1| - 0.58 10.2 2.9 9.1 6.3 0.2 3.1 3 0 0 3 3 3 0 Helix-turn-helix domain DZR PF12773.7 gi|407464509|ref|YP_006775391.1| - 0.63 10.1 3.3 2.2 8.4 3.5 1.7 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|407464509|ref|YP_006775391.1| - 1.1 9.0 9.9 0.92 9.3 0.7 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|407464509|ref|YP_006775391.1| - 4.4 7.1 7.8 9.7 6.0 0.4 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain CofC PF01983.16 gi|407464510|ref|YP_006775392.1| - 4e-21 75.2 5.7 5.2e-21 74.8 5.7 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|407464510|ref|YP_006775392.1| - 0.0076 16.6 0.0 0.0083 16.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain UPF0052 PF01933.18 gi|407464511|ref|YP_006775393.1| - 3e-58 197.4 0.1 3.5e-58 197.2 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 Methyltransf_11 PF08241.12 gi|407464513|ref|YP_006775395.1| - 7e-19 68.3 0.0 2.4e-18 66.6 0.0 1.9 2 1 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|407464513|ref|YP_006775395.1| - 8.8e-19 67.8 0.1 1.3e-18 67.3 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|407464513|ref|YP_006775395.1| - 2.9e-18 66.2 0.0 3.7e-18 65.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407464513|ref|YP_006775395.1| - 3.2e-17 63.0 0.0 1.4e-16 61.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|407464513|ref|YP_006775395.1| - 1.6e-14 54.5 0.0 2.7e-14 53.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 gi|407464513|ref|YP_006775395.1| - 1.2e-09 37.5 0.1 2.3e-09 36.7 0.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) NodS PF05401.11 gi|407464513|ref|YP_006775395.1| - 3.7e-09 36.5 0.0 4.4e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Ubie_methyltran PF01209.18 gi|407464513|ref|YP_006775395.1| - 5e-07 29.3 1.8 1.2e-06 28.0 0.2 1.9 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.17 gi|407464513|ref|YP_006775395.1| - 5.4e-07 29.2 0.2 0.00012 21.5 0.0 2.2 2 0 0 2 2 2 1 Putative methyltransferase DOT1 PF08123.13 gi|407464513|ref|YP_006775395.1| - 5.4e-06 26.1 0.4 4.2e-05 23.2 0.2 2.2 1 1 0 1 1 1 1 Histone methylation protein DOT1 MTS PF05175.14 gi|407464513|ref|YP_006775395.1| - 3.7e-05 23.3 0.0 6.4e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|407464513|ref|YP_006775395.1| - 8.8e-05 21.9 0.7 0.00012 21.5 0.7 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 gi|407464513|ref|YP_006775395.1| - 0.0002 21.0 0.1 0.0016 18.0 0.0 2.0 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW AdoMet_MTase PF07757.13 gi|407464513|ref|YP_006775395.1| - 0.00032 21.0 0.0 0.00083 19.7 0.0 1.8 1 0 0 1 1 1 1 Predicted AdoMet-dependent methyltransferase Methyltransf_18 PF12847.7 gi|407464513|ref|YP_006775395.1| - 0.00095 19.1 0.0 0.002 18.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|407464513|ref|YP_006775395.1| - 0.0015 17.8 0.0 0.0032 16.8 0.0 1.6 1 1 0 1 1 1 1 O-methyltransferase domain Methyltransf_32 PF13679.6 gi|407464513|ref|YP_006775395.1| - 0.0018 18.3 0.1 0.0039 17.2 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain TehB PF03848.14 gi|407464513|ref|YP_006775395.1| - 0.0031 17.0 0.0 0.0038 16.7 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB GidB PF02527.15 gi|407464513|ref|YP_006775395.1| - 0.0036 16.6 0.1 0.0055 16.0 0.1 1.4 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G PCMT PF01135.19 gi|407464513|ref|YP_006775395.1| - 0.0065 16.2 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DREV PF05219.12 gi|407464513|ref|YP_006775395.1| - 0.026 13.6 0.1 0.035 13.2 0.1 1.4 1 1 0 1 1 1 0 DREV methyltransferase MetOD2 PF18548.1 gi|407464514|ref|YP_006775396.1| - 0.00048 20.2 0.4 0.0034 17.5 0.4 2.6 1 0 0 1 1 1 1 Metanogen output domain 2 DELLA PF12041.8 gi|407464514|ref|YP_006775396.1| - 0.1 12.5 0.4 1.2 9.0 0.0 3.0 2 0 0 2 2 2 0 Transcriptional regulator DELLA protein N terminal DUF4363 PF14276.6 gi|407464514|ref|YP_006775396.1| - 1.8 8.7 17.4 0.23 11.6 0.1 5.1 5 0 0 5 5 5 0 Domain of unknown function (DUF4363) DAO PF01266.24 gi|407464515|ref|YP_006775397.1| - 3.4e-14 53.2 1.7 1.3e-06 28.3 0.5 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|407464515|ref|YP_006775397.1| - 6.1e-14 52.2 0.1 9.7e-14 51.5 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|407464515|ref|YP_006775397.1| - 6.8e-12 45.3 0.0 2.5e-11 43.4 0.0 1.9 1 1 0 1 1 1 1 FAD binding domain Trp_halogenase PF04820.14 gi|407464515|ref|YP_006775397.1| - 2.1e-11 43.4 0.1 8.7e-06 24.8 0.0 2.1 1 1 1 2 2 2 2 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|407464515|ref|YP_006775397.1| - 3e-11 43.0 0.8 4e-08 32.8 0.2 2.1 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 gi|407464515|ref|YP_006775397.1| - 1.2e-09 37.4 0.5 5.5e-08 31.9 0.3 2.1 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|407464515|ref|YP_006775397.1| - 3.7e-09 36.2 2.9 1.2e-06 28.0 0.3 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|407464515|ref|YP_006775397.1| - 6.6e-08 32.0 1.7 2.1e-07 30.4 0.5 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|407464515|ref|YP_006775397.1| - 1.2e-06 28.7 0.0 2.3e-06 27.7 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|407464515|ref|YP_006775397.1| - 8.5e-06 25.2 3.3 8.5e-05 21.9 3.2 2.4 1 1 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 gi|407464515|ref|YP_006775397.1| - 2.9e-05 23.3 0.1 5.6e-05 22.4 0.1 1.6 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 gi|407464515|ref|YP_006775397.1| - 9.3e-05 21.8 1.2 0.00033 20.0 1.2 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|407464515|ref|YP_006775397.1| - 0.00017 22.1 2.1 0.046 14.3 0.2 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|407464515|ref|YP_006775397.1| - 0.002 17.5 0.0 0.0031 16.8 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|407464515|ref|YP_006775397.1| - 0.017 15.0 0.0 0.029 14.3 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF3797 PF12677.7 gi|407464516|ref|YP_006775398.1| - 0.013 15.4 0.1 0.018 14.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) zf-Mss51 PF13824.6 gi|407464516|ref|YP_006775398.1| - 0.088 12.9 1.0 0.11 12.6 0.7 1.5 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF1451 PF07295.11 gi|407464516|ref|YP_006775398.1| - 0.15 12.1 2.1 1.5 8.9 0.1 2.1 1 1 1 2 2 2 0 Zinc-ribbon containing domain adh_short_C2 PF13561.6 gi|407464518|ref|YP_006775400.1| - 6.5e-69 232.0 0.6 7.5e-69 231.8 0.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|407464518|ref|YP_006775400.1| - 3.3e-61 206.2 1.4 4e-61 205.9 1.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|407464518|ref|YP_006775400.1| - 8e-10 38.9 0.5 1.1e-09 38.5 0.5 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|407464518|ref|YP_006775400.1| - 8.5e-07 28.7 0.5 1.1e-06 28.3 0.5 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|407464518|ref|YP_006775400.1| - 5.9e-06 26.3 0.1 7.5e-06 26.0 0.1 1.2 1 0 0 1 1 1 1 NAD(P)H-binding 3HCDH_N PF02737.18 gi|407464518|ref|YP_006775400.1| - 0.00078 19.4 0.2 0.0014 18.6 0.2 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DFP PF04127.15 gi|407464518|ref|YP_006775400.1| - 0.00079 19.3 0.4 0.0012 18.7 0.4 1.2 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein F420_oxidored PF03807.17 gi|407464518|ref|YP_006775400.1| - 0.0043 17.6 1.0 0.0094 16.5 1.0 1.8 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NmrA PF05368.13 gi|407464518|ref|YP_006775400.1| - 0.0047 16.5 0.3 0.014 15.0 0.2 1.7 2 0 0 2 2 2 1 NmrA-like family Polysacc_synt_2 PF02719.15 gi|407464518|ref|YP_006775400.1| - 0.013 14.6 2.1 0.017 14.3 2.1 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF1776 PF08643.10 gi|407464518|ref|YP_006775400.1| - 0.018 14.4 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) RmlD_sub_bind PF04321.17 gi|407464518|ref|YP_006775400.1| - 0.048 12.8 0.2 0.14 11.3 0.1 1.8 2 0 0 2 2 2 0 RmlD substrate binding domain GDP_Man_Dehyd PF16363.5 gi|407464518|ref|YP_006775400.1| - 0.082 12.3 1.5 0.074 12.4 0.2 1.6 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase NAD_binding_7 PF13241.6 gi|407464518|ref|YP_006775400.1| - 0.28 11.6 1.3 0.54 10.7 1.3 1.8 1 1 0 1 1 1 0 Putative NAD(P)-binding NAD_binding_2 PF03446.15 gi|407464519|ref|YP_006775401.1| - 4.1e-38 131.0 0.3 8.1e-38 130.1 0.3 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 gi|407464519|ref|YP_006775401.1| - 1.3e-20 73.8 0.1 2.2e-20 73.1 0.1 1.4 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 gi|407464519|ref|YP_006775401.1| - 4.6e-09 36.8 1.1 1.1e-08 35.6 0.4 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|407464519|ref|YP_006775401.1| - 2.5e-08 33.5 0.1 4e-08 32.8 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|407464519|ref|YP_006775401.1| - 2.3e-05 24.5 0.6 4.4e-05 23.6 0.2 1.8 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 gi|407464519|ref|YP_006775401.1| - 7e-05 22.5 0.2 0.00019 21.0 0.1 1.8 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain ApbA PF02558.16 gi|407464519|ref|YP_006775401.1| - 8.8e-05 22.2 0.3 0.00033 20.3 0.3 1.9 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|407464519|ref|YP_006775401.1| - 9e-05 22.5 0.1 0.018 15.0 0.1 2.4 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 gi|407464519|ref|YP_006775401.1| - 0.006 16.5 0.1 0.012 15.5 0.1 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rossmann-like PF10727.9 gi|407464519|ref|YP_006775401.1| - 0.017 15.0 0.0 0.044 13.6 0.0 1.6 2 0 0 2 2 2 0 Rossmann-like domain Sacchrp_dh_NADP PF03435.18 gi|407464519|ref|YP_006775401.1| - 0.026 14.8 0.1 0.06 13.6 0.1 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain UDPG_MGDP_dh_N PF03721.14 gi|407464519|ref|YP_006775401.1| - 0.083 12.5 1.6 0.74 9.4 0.0 2.5 2 1 1 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain zf-H2C2_5 PF13909.6 gi|407464521|ref|YP_006775403.1| - 0.00026 20.7 0.6 0.00043 20.0 0.2 1.6 2 0 0 2 2 2 1 C2H2-type zinc-finger domain zf-C2H2 PF00096.26 gi|407464521|ref|YP_006775403.1| - 0.00045 20.5 1.0 0.00045 20.5 1.0 1.8 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|407464521|ref|YP_006775403.1| - 0.0049 17.6 1.9 0.0088 16.8 1.1 1.8 2 0 0 2 2 2 1 C2H2-type zinc finger LIM_bind PF01803.16 gi|407464521|ref|YP_006775403.1| - 0.06 12.9 0.7 0.084 12.4 0.7 1.2 1 0 0 1 1 1 0 LIM-domain binding protein MitMem_reg PF13012.6 gi|407464521|ref|YP_006775403.1| - 0.074 13.5 0.1 2.9 8.4 0.0 2.1 1 1 1 2 2 2 0 Maintenance of mitochondrial structure and function zf-C2H2 PF00096.26 gi|407464523|ref|YP_006775405.1| - 0.16 12.5 0.2 0.16 12.5 0.2 2.7 3 1 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 gi|407464523|ref|YP_006775405.1| - 0.19 12.0 1.2 0.19 12.0 1.2 2.7 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-C2H2_4 PF13894.6 gi|407464523|ref|YP_006775405.1| - 0.34 11.9 0.4 0.34 11.9 0.4 2.6 3 0 0 3 3 3 0 C2H2-type zinc finger Thioredoxin_4 PF13462.6 gi|407464524|ref|YP_006775406.1| - 6.5e-36 124.0 0.0 7.6e-36 123.8 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|407464524|ref|YP_006775406.1| - 4.5e-13 49.4 1.2 2.1e-11 43.9 0.0 2.1 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 gi|407464524|ref|YP_006775406.1| - 1.3e-06 28.8 0.0 2.2e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_5 PF13743.6 gi|407464524|ref|YP_006775406.1| - 1.7e-06 27.9 0.0 2.3e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin GPHR_N PF12537.8 gi|407464524|ref|YP_006775406.1| - 0.023 14.8 0.2 0.064 13.3 0.2 1.7 1 0 0 1 1 1 0 The Golgi pH Regulator (GPHR) Family N-terminal Ephrin_lbd PF01404.19 gi|407464524|ref|YP_006775406.1| - 0.043 13.9 0.1 0.065 13.3 0.1 1.3 1 0 0 1 1 1 0 Ephrin receptor ligand binding domain Exosortase_EpsH PF09721.10 gi|407464527|ref|YP_006775409.1| - 5.6e-06 26.1 17.5 6.7e-06 25.8 17.5 1.1 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) DUF998 PF06197.13 gi|407464527|ref|YP_006775409.1| - 0.76 9.3 14.6 1.2 8.7 11.8 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF998) MerC PF03203.14 gi|407464527|ref|YP_006775409.1| - 2.4 8.7 10.5 0.45 11.0 3.0 2.3 2 0 0 2 2 2 0 MerC mercury resistance protein IMS PF00817.20 gi|407464528|ref|YP_006775410.1| - 1.8e-41 141.6 0.1 3.7e-40 137.4 0.0 2.1 2 0 0 2 2 2 1 impB/mucB/samB family IMS_C PF11799.8 gi|407464528|ref|YP_006775410.1| - 2.4e-11 44.4 0.8 4.9e-11 43.4 0.8 1.5 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|407464528|ref|YP_006775410.1| - 2.8e-06 27.3 0.0 8.4e-06 25.8 0.0 1.9 1 0 0 1 1 1 1 IMS family HHH motif BRICHOS PF04089.14 gi|407464528|ref|YP_006775410.1| - 0.0033 17.6 0.3 0.086 13.1 0.0 2.4 2 0 0 2 2 2 1 BRICHOS domain Cdd1 PF11731.8 gi|407464528|ref|YP_006775410.1| - 0.0065 16.7 0.0 0.022 15.0 0.0 1.9 1 0 0 1 1 1 1 Pathogenicity locus HHH_5 PF14520.6 gi|407464528|ref|YP_006775410.1| - 0.029 15.0 0.0 0.18 12.5 0.0 2.5 2 0 0 2 2 2 0 Helix-hairpin-helix domain DUF4423 PF14394.6 gi|407464528|ref|YP_006775410.1| - 0.043 13.5 0.1 0.11 12.2 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF5071 PF16804.5 gi|407464528|ref|YP_006775410.1| - 0.11 12.8 0.1 0.28 11.4 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5071) Syntaxin_2 PF14523.6 gi|407464528|ref|YP_006775410.1| - 0.45 10.9 6.6 0.16 12.4 2.3 2.5 2 2 0 2 2 2 0 Syntaxin-like protein Viral_DNA_bi PF02236.17 gi|407464529|ref|YP_006775411.1| - 0.021 15.0 0.2 5 7.4 0.0 2.1 1 1 1 2 2 2 0 Viral DNA-binding protein, all alpha domain Ribosomal_L1 PF00687.21 gi|407464529|ref|YP_006775411.1| - 0.072 12.8 0.2 0.074 12.8 0.2 1.0 1 0 0 1 1 1 0 Ribosomal protein L1p/L10e family Alba PF01918.21 gi|407464530|ref|YP_006775412.1| - 1.5e-12 47.1 0.7 2.1e-12 46.7 0.7 1.2 1 0 0 1 1 1 1 Alba Trypan_PARP PF05887.11 gi|407464530|ref|YP_006775412.1| - 1.9e-07 31.1 49.9 1.9e-07 31.1 49.9 2.2 1 1 1 2 2 2 1 Procyclic acidic repetitive protein (PARP) Ndc1_Nup PF09531.10 gi|407464530|ref|YP_006775412.1| - 7 5.2 6.7 8.5 4.9 6.7 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup LysE PF01810.18 gi|407464532|ref|YP_006775414.1| - 1.9e-26 92.7 16.7 2.2e-26 92.5 16.7 1.0 1 0 0 1 1 1 1 LysE type translocator PAC2 PF09754.9 gi|407464533|ref|YP_006775415.1| - 7.7e-25 88.2 0.0 8.7e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Arm-DNA-bind_4 PF14657.6 gi|407464533|ref|YP_006775415.1| - 0.35 10.7 2.1 0.62 9.9 2.1 1.4 1 0 0 1 1 1 0 Arm DNA-binding domain DS PF01916.17 gi|407464534|ref|YP_006775416.1| - 2e-91 306.3 0.1 2.2e-91 306.1 0.1 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Inos-1-P_synth PF01658.17 gi|407464535|ref|YP_006775417.1| - 4.4e-29 100.9 0.2 3.2e-28 98.1 0.0 2.1 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase AMP-binding_C_2 PF14535.6 gi|407464535|ref|YP_006775417.1| - 0.056 13.8 0.4 1.5 9.1 0.0 2.4 2 0 0 2 2 2 0 AMP-binding enzyme C-terminal domain Peptidase_M60 PF13402.6 gi|407464535|ref|YP_006775417.1| - 0.22 11.0 0.0 0.33 10.4 0.0 1.2 1 0 0 1 1 1 0 Peptidase M60, enhancin and enhancin-like CN_hydrolase PF00795.22 gi|407464536|ref|YP_006775418.1| - 8.3e-19 67.9 0.0 1.1e-18 67.6 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase SMC_N PF02463.19 gi|407464537|ref|YP_006775419.1| - 1.6e-60 204.3 27.0 7.7e-33 113.8 0.2 4.4 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|407464537|ref|YP_006775419.1| - 2.1e-20 74.1 7.8 2.1e-20 74.1 7.8 6.6 2 2 3 5 5 2 1 AAA domain SMC_hinge PF06470.13 gi|407464537|ref|YP_006775419.1| - 4.1e-15 56.1 0.0 1.3e-14 54.5 0.0 2.0 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_15 PF13175.6 gi|407464537|ref|YP_006775419.1| - 1.4e-09 38.1 24.1 1.4e-09 38.1 24.1 4.4 2 2 2 4 4 3 1 AAA ATPase domain AAA_21 PF13304.6 gi|407464537|ref|YP_006775419.1| - 1e-08 35.4 27.3 1.5e-05 24.9 7.5 4.8 3 2 1 5 5 5 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|407464537|ref|YP_006775419.1| - 3.5e-06 26.7 0.0 8.8e-06 25.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain JIP_LZII PF16471.5 gi|407464537|ref|YP_006775419.1| - 0.0026 17.9 3.3 0.0026 17.9 3.3 9.4 8 2 1 9 9 9 2 JNK-interacting protein leucine zipper II ZapB PF06005.12 gi|407464537|ref|YP_006775419.1| - 0.0029 18.0 2.8 0.0029 18.0 2.8 8.9 6 1 1 7 7 5 1 Cell division protein ZapB ERM PF00769.19 gi|407464537|ref|YP_006775419.1| - 0.0047 16.8 21.1 0.0047 16.8 21.1 4.5 2 2 2 4 4 4 1 Ezrin/radixin/moesin family RasGAP_C PF03836.15 gi|407464537|ref|YP_006775419.1| - 0.0099 16.0 4.5 0.0099 16.0 4.5 7.7 3 2 4 7 7 4 1 RasGAP C-terminus PKcGMP_CC PF16808.5 gi|407464537|ref|YP_006775419.1| - 0.074 12.9 0.3 0.074 12.9 0.3 4.4 4 0 0 4 4 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase SbcCD_C PF13558.6 gi|407464537|ref|YP_006775419.1| - 0.084 13.1 0.0 0.35 11.1 0.0 2.1 2 0 0 2 2 1 0 Putative exonuclease SbcCD, C subunit DUF4107 PF13389.6 gi|407464537|ref|YP_006775419.1| - 0.14 12.3 3.8 0.75 9.9 3.8 2.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4107) APG6_N PF17675.1 gi|407464537|ref|YP_006775419.1| - 0.47 11.0 108.8 0.017 15.6 13.5 9.0 3 2 4 8 8 8 0 Apg6 coiled-coil region AAA_16 PF13191.6 gi|407464537|ref|YP_006775419.1| - 0.82 10.0 0.0 0.82 10.0 0.0 3.1 3 2 0 3 3 3 0 AAA ATPase domain Spc7 PF08317.11 gi|407464537|ref|YP_006775419.1| - 0.89 8.4 103.5 0.0076 15.2 17.9 6.4 2 2 4 6 6 6 0 Spc7 kinetochore protein DUF3584 PF12128.8 gi|407464537|ref|YP_006775419.1| - 3 5.2 90.1 3 5.3 35.9 3.3 2 2 0 2 2 2 0 Protein of unknown function (DUF3584) Rop-like PF05082.13 gi|407464537|ref|YP_006775419.1| - 4.2 7.3 8.1 2.7 7.9 0.3 4.0 3 0 0 3 3 3 0 Rop-like CENP-F_leu_zip PF10473.9 gi|407464537|ref|YP_006775419.1| - 4.6 7.3 101.2 0.25 11.4 8.2 8.3 2 2 6 8 8 8 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4342 PF14242.6 gi|407464537|ref|YP_006775419.1| - 7.6 6.6 11.5 30 4.7 1.3 4.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4342) ATG16 PF08614.11 gi|407464537|ref|YP_006775419.1| - 8 6.6 85.8 1.8 8.8 4.8 6.0 2 2 2 4 4 4 0 Autophagy protein 16 (ATG16) ABC_tran PF00005.27 gi|407464538|ref|YP_006775420.1| - 1.4e-33 116.3 0.0 2.1e-33 115.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|407464538|ref|YP_006775420.1| - 2.8e-18 66.2 1.1 3.9e-18 65.7 0.3 1.7 2 0 0 2 2 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|407464538|ref|YP_006775420.1| - 1e-06 28.8 0.9 0.0013 18.6 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|407464538|ref|YP_006775420.1| - 8.1e-05 22.9 0.4 0.0016 18.7 0.4 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|407464538|ref|YP_006775420.1| - 0.00016 21.2 0.6 0.00075 19.0 0.6 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|407464538|ref|YP_006775420.1| - 0.00022 21.7 0.0 0.00048 20.5 0.0 1.6 1 1 1 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|407464538|ref|YP_006775420.1| - 0.00031 21.2 0.4 0.0039 17.6 0.4 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|407464538|ref|YP_006775420.1| - 0.00046 20.1 0.1 0.00082 19.3 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 gi|407464538|ref|YP_006775420.1| - 0.00094 18.9 0.1 0.0022 17.7 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|407464538|ref|YP_006775420.1| - 0.0024 17.6 0.0 0.003 17.3 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|407464538|ref|YP_006775420.1| - 0.0035 17.9 0.0 0.007 16.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|407464538|ref|YP_006775420.1| - 0.0058 15.9 0.0 0.01 15.1 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin T2SSE PF00437.20 gi|407464538|ref|YP_006775420.1| - 0.0067 15.5 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein DUF4974 PF16344.5 gi|407464538|ref|YP_006775420.1| - 0.024 14.6 0.3 0.074 13.1 0.1 2.0 2 1 0 2 2 1 0 Domain of unknown function (DUF4974) APS_kinase PF01583.20 gi|407464538|ref|YP_006775420.1| - 0.027 14.4 0.0 0.07 13.0 0.0 1.7 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_10 PF12846.7 gi|407464538|ref|YP_006775420.1| - 0.029 13.3 0.0 0.046 12.6 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_7 PF12775.7 gi|407464538|ref|YP_006775420.1| - 0.035 13.6 0.1 0.24 10.9 0.0 2.1 1 1 1 2 2 2 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|407464538|ref|YP_006775420.1| - 0.056 13.2 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_23 PF13476.6 gi|407464538|ref|YP_006775420.1| - 0.06 13.9 0.8 0.16 12.5 0.1 1.9 1 1 1 2 2 2 0 AAA domain TsaE PF02367.17 gi|407464538|ref|YP_006775420.1| - 0.065 13.2 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 gi|407464538|ref|YP_006775420.1| - 0.066 13.4 0.1 0.51 10.5 0.1 2.1 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|407464538|ref|YP_006775420.1| - 0.067 13.6 0.5 0.3 11.5 0.5 2.1 1 1 0 1 1 1 0 RNA helicase DUF87 PF01935.17 gi|407464538|ref|YP_006775420.1| - 0.067 13.3 0.1 0.16 12.0 0.1 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain IstB_IS21 PF01695.17 gi|407464538|ref|YP_006775420.1| - 0.091 12.5 0.1 1.1 9.0 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein TniB PF05621.11 gi|407464538|ref|YP_006775420.1| - 0.11 11.9 0.2 2.2 7.7 0.1 2.3 2 0 0 2 2 2 0 Bacterial TniB protein AAA_24 PF13479.6 gi|407464538|ref|YP_006775420.1| - 0.11 12.3 0.0 0.36 10.5 0.0 2.0 3 0 0 3 3 3 0 AAA domain NB-ARC PF00931.22 gi|407464538|ref|YP_006775420.1| - 0.11 11.7 0.1 0.2 10.8 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_25 PF13481.6 gi|407464538|ref|YP_006775420.1| - 0.15 11.6 0.0 0.39 10.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|407464538|ref|YP_006775420.1| - 0.18 11.8 0.1 0.56 10.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 gi|407464538|ref|YP_006775420.1| - 0.19 11.3 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Methyltransf_33 PF10017.9 gi|407464539|ref|YP_006775421.1| - 4.2e-102 341.4 1.0 5e-102 341.2 1.0 1.0 1 0 0 1 1 1 1 Histidine-specific methyltransferase, SAM-dependent Methyltransf_28 PF02636.17 gi|407464539|ref|YP_006775421.1| - 0.015 15.0 0.0 0.027 14.1 0.0 1.4 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase DUF1825 PF08855.10 gi|407464539|ref|YP_006775421.1| - 0.031 14.2 0.7 2.3 8.2 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF1825) AAA_14 PF13173.6 gi|407464539|ref|YP_006775421.1| - 0.056 13.5 0.8 0.34 11.0 0.0 2.6 3 0 0 3 3 3 0 AAA domain FGE-sulfatase PF03781.16 gi|407464540|ref|YP_006775422.1| - 1.1e-48 166.1 2.9 2.4e-48 165.0 2.9 1.5 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DinB_2 PF12867.7 gi|407464540|ref|YP_006775422.1| - 3.8e-08 33.9 0.0 1.8e-07 31.8 0.0 2.1 1 1 0 1 1 1 1 DinB superfamily Nab6_mRNP_bdg PF10567.9 gi|407464540|ref|YP_006775422.1| - 0.052 13.0 0.0 0.31 10.5 0.0 1.9 2 0 0 2 2 2 0 RNA-recognition motif DinB PF05163.12 gi|407464540|ref|YP_006775422.1| - 0.09 12.7 0.1 0.29 11.0 0.0 1.8 2 0 0 2 2 2 0 DinB family ProRS-C_1 PF09180.11 gi|407464541|ref|YP_006775423.1| - 2.7e-21 75.5 0.8 2.7e-21 75.5 0.8 2.0 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal HGTP_anticodon PF03129.20 gi|407464541|ref|YP_006775423.1| - 5.9e-18 64.8 1.2 9.3e-18 64.2 0.1 1.9 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|407464541|ref|YP_006775423.1| - 2.3e-17 63.6 0.0 4e-17 62.8 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) OKR_DC_1 PF01276.20 gi|407464542|ref|YP_006775424.1| - 0.081 11.6 0.0 0.081 11.6 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain HAD PF12710.7 gi|407464543|ref|YP_006775425.1| - 1.7e-12 48.1 0.0 2.3e-12 47.7 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|407464543|ref|YP_006775425.1| - 4.1e-12 46.9 0.1 5.4e-11 43.2 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|407464543|ref|YP_006775425.1| - 1.5e-05 24.9 0.0 0.0021 17.8 0.1 2.5 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|407464543|ref|YP_006775425.1| - 0.0095 16.0 0.6 0.054 13.6 0.1 2.5 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase F420_ligase PF01996.16 gi|407464544|ref|YP_006775426.1| - 4.6e-54 183.3 0.4 5.7e-54 183.1 0.4 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase DUF3906 PF13046.6 gi|407464544|ref|YP_006775426.1| - 0.086 12.9 0.0 0.72 10.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3906) DALR_1 PF05746.15 gi|407464545|ref|YP_006775427.1| - 5.1e-28 97.6 0.7 1.8e-26 92.6 0.1 2.9 3 0 0 3 3 3 1 DALR anticodon binding domain tRNA-synt_1d PF00750.19 gi|407464545|ref|YP_006775427.1| - 7.3e-27 94.2 3.2 1.2e-22 80.4 0.3 2.2 1 1 0 2 2 2 2 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 gi|407464545|ref|YP_006775427.1| - 2.1e-15 57.1 0.0 5.8e-15 55.6 0.0 1.8 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 gi|407464545|ref|YP_006775427.1| - 0.00054 19.4 0.1 0.0011 18.4 0.1 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|407464545|ref|YP_006775427.1| - 0.034 12.9 0.1 0.063 12.0 0.1 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (M) NUMOD1 PF07453.13 gi|407464545|ref|YP_006775427.1| - 0.51 10.7 0.1 0.51 10.7 0.1 2.9 3 0 0 3 3 3 0 NUMOD1 domain Hydrolase_3 PF08282.12 gi|407464546|ref|YP_006775428.1| - 1e-29 104.1 1.4 1.6e-21 77.2 0.1 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|407464546|ref|YP_006775428.1| - 8.8e-07 28.7 0.0 0.00059 19.4 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 gi|407464546|ref|YP_006775428.1| - 1.2e-05 25.7 0.3 0.0056 17.0 0.0 2.6 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.16 gi|407464546|ref|YP_006775428.1| - 0.00039 19.6 0.0 0.13 11.3 0.0 2.2 2 0 0 2 2 2 2 Trehalose-phosphatase HAD_2 PF13419.6 gi|407464546|ref|YP_006775428.1| - 0.0058 16.7 0.0 0.017 15.2 0.0 1.8 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|407464546|ref|YP_006775428.1| - 0.013 15.9 0.0 0.44 10.9 0.0 2.2 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase DUF5018 PF16410.5 gi|407464546|ref|YP_006775428.1| - 0.027 13.2 0.0 0.039 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5018) Hydrolase_like PF13242.6 gi|407464546|ref|YP_006775428.1| - 0.032 14.3 0.0 0.061 13.4 0.0 1.5 1 0 0 1 1 1 0 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|407464546|ref|YP_006775428.1| - 0.099 12.8 0.0 0.23 11.6 0.0 1.6 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase MMR_HSR1_Xtn PF16897.5 gi|407464547|ref|YP_006775429.1| - 3.9e-29 100.8 3.4 7.4e-29 99.9 3.4 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|407464547|ref|YP_006775429.1| - 6.3e-22 77.8 1.1 1.1e-21 77.1 0.1 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.21 gi|407464547|ref|YP_006775429.1| - 2.3e-21 75.6 0.0 6.9e-21 74.1 0.0 1.9 2 0 0 2 2 2 1 TGS domain FeoB_N PF02421.18 gi|407464547|ref|YP_006775429.1| - 3.2e-16 59.3 2.8 1.4e-13 50.6 0.1 2.4 2 0 0 2 2 2 2 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|407464547|ref|YP_006775429.1| - 2.6e-06 27.5 3.0 0.0086 16.0 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase AIG1 PF04548.16 gi|407464547|ref|YP_006775429.1| - 0.0017 17.7 0.0 0.0034 16.7 0.0 1.5 1 0 0 1 1 1 1 AIG1 family MnmE_helical PF12631.7 gi|407464547|ref|YP_006775429.1| - 0.0033 17.6 0.1 0.0042 17.3 0.1 1.1 1 0 0 1 1 1 1 MnmE helical domain Arf PF00025.21 gi|407464547|ref|YP_006775429.1| - 0.0067 15.9 3.3 0.097 12.1 0.1 2.6 2 1 0 2 2 2 1 ADP-ribosylation factor family Dynamin_N PF00350.23 gi|407464547|ref|YP_006775429.1| - 0.014 15.4 5.1 0.27 11.3 0.4 2.9 2 1 1 3 3 3 0 Dynamin family SRPRB PF09439.10 gi|407464547|ref|YP_006775429.1| - 0.046 13.1 0.1 0.046 13.1 0.1 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Ras PF00071.22 gi|407464547|ref|YP_006775429.1| - 0.093 12.3 1.2 9 5.9 0.1 2.3 2 0 0 2 2 2 0 Ras family cobW PF02492.19 gi|407464547|ref|YP_006775429.1| - 0.17 11.4 5.0 0.34 10.5 0.5 2.5 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 gi|407464547|ref|YP_006775429.1| - 0.22 11.8 0.4 0.46 10.7 0.4 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|407464547|ref|YP_006775429.1| - 0.22 11.9 0.6 1.2 9.5 0.1 2.3 2 1 0 3 3 3 0 AAA ATPase domain YTV PF07639.11 gi|407464548|ref|YP_006775430.1| - 0.92 9.6 8.2 2.3 8.4 2.3 2.3 2 0 0 2 2 2 0 YTV DUF1932 PF09130.11 gi|407464548|ref|YP_006775430.1| - 3.8 7.5 9.2 6.5 6.8 2.0 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF1932) Collagen PF01391.18 gi|407464549|ref|YP_006775431.1| - 5.8e-59 195.7 230.7 9e-09 35.0 35.0 7.7 1 1 3 4 4 4 3 Collagen triple helix repeat (20 copies) TPR_1 PF00515.28 gi|407464550|ref|YP_006775432.1| - 3e-26 90.1 10.3 1.1e-08 34.6 0.1 5.3 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407464550|ref|YP_006775432.1| - 1.3e-25 87.3 10.9 1.4e-07 31.1 0.1 5.5 6 0 0 6 6 5 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|407464550|ref|YP_006775432.1| - 3e-18 65.2 9.5 4.2e-07 29.5 0.0 5.1 3 1 2 5 5 5 4 TPR repeat TPR_8 PF13181.6 gi|407464550|ref|YP_006775432.1| - 1.5e-16 59.1 10.5 0.00072 19.6 0.0 5.7 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_16 PF13432.6 gi|407464550|ref|YP_006775432.1| - 1.8e-16 60.5 0.2 2.3e-07 31.4 0.0 2.9 2 1 2 4 4 3 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|407464550|ref|YP_006775432.1| - 3.7e-15 55.1 1.5 0.00014 22.0 0.2 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407464550|ref|YP_006775432.1| - 9e-15 54.9 5.9 1.3e-09 38.4 0.1 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407464550|ref|YP_006775432.1| - 5e-14 51.8 5.6 0.00049 20.7 0.0 5.4 4 1 2 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407464550|ref|YP_006775432.1| - 9e-12 45.1 5.8 2.1e-05 24.7 1.0 3.7 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|407464550|ref|YP_006775432.1| - 1e-09 38.4 6.1 0.13 12.9 0.1 5.8 6 0 0 6 6 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|407464550|ref|YP_006775432.1| - 2.7e-08 33.9 1.5 2.1e-06 27.8 1.5 2.4 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 gi|407464550|ref|YP_006775432.1| - 4.7e-08 33.1 0.1 0.00029 20.9 0.0 3.1 2 1 2 4 4 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|407464550|ref|YP_006775432.1| - 4.1e-06 26.8 1.0 0.096 12.8 0.0 4.0 2 1 2 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|407464550|ref|YP_006775432.1| - 4.3e-06 26.4 2.7 2.5 8.1 0.1 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|407464550|ref|YP_006775432.1| - 1.8e-05 24.4 3.9 0.47 10.6 0.0 4.4 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_20 PF14561.6 gi|407464550|ref|YP_006775432.1| - 0.0021 18.3 1.6 1.2 9.5 0.2 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat HTH_27 PF13463.6 gi|407464550|ref|YP_006775432.1| - 0.0028 18.1 0.3 0.009 16.5 0.1 2.0 2 0 0 2 2 1 1 Winged helix DNA-binding domain ChAPs PF09295.10 gi|407464550|ref|YP_006775432.1| - 0.0032 16.5 0.3 0.0052 15.8 0.3 1.3 1 0 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) Rapsyn_N PF10579.9 gi|407464550|ref|YP_006775432.1| - 0.017 15.2 0.1 1.4 9.1 0.0 2.7 1 1 0 2 2 2 0 Rapsyn N-terminal myristoylation and linker region DUF4919 PF16266.5 gi|407464550|ref|YP_006775432.1| - 0.039 13.9 2.5 0.14 12.1 0.1 2.5 2 1 1 3 3 2 0 Domain of unknown function (DUF4919) YfiO PF13525.6 gi|407464550|ref|YP_006775432.1| - 0.052 13.3 0.7 0.33 10.6 0.3 2.1 1 1 1 2 2 2 0 Outer membrane lipoprotein betaPIX_CC PF16523.5 gi|407464550|ref|YP_006775432.1| - 0.083 12.7 5.3 0.49 10.3 0.1 3.4 4 0 0 4 4 2 0 betaPIX coiled coil TrmB PF01978.19 gi|407464550|ref|YP_006775432.1| - 0.11 12.4 0.0 28 4.7 0.0 3.0 3 0 0 3 3 2 0 Sugar-specific transcriptional regulator TrmB Vps4_C PF09336.10 gi|407464550|ref|YP_006775432.1| - 0.13 12.3 0.5 0.51 10.4 0.1 2.1 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain MIT PF04212.18 gi|407464550|ref|YP_006775432.1| - 0.18 11.9 10.4 24 5.1 0.0 4.7 5 0 0 5 5 4 0 MIT (microtubule interacting and transport) domain FIVAR PF07554.13 gi|407464550|ref|YP_006775432.1| - 0.19 12.5 3.1 13 6.7 0.1 2.8 2 0 0 2 2 2 0 FIVAR domain TOM20_plant PF06552.12 gi|407464550|ref|YP_006775432.1| - 0.25 11.1 2.7 0.37 10.5 0.4 2.3 2 1 0 2 2 2 0 Plant specific mitochondrial import receptor subunit TOM20 TPR_3 PF07720.12 gi|407464550|ref|YP_006775432.1| - 0.91 9.6 6.6 15 5.7 0.3 3.8 4 0 0 4 4 3 0 Tetratricopeptide repeat DUF5633 PF18656.1 gi|407464550|ref|YP_006775432.1| - 1.2 9.1 4.4 3.1 7.8 0.2 3.5 4 0 0 4 4 3 0 Family of unknown function (DUF5633) Rhodanese PF00581.20 gi|407464551|ref|YP_006775433.1| - 8.3e-33 113.1 0.0 7.7e-16 58.6 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain NIR_SIR PF01077.22 gi|407464552|ref|YP_006775434.1| - 3.5e-42 143.6 0.0 1.6e-31 108.9 0.0 2.3 2 0 0 2 2 2 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|407464552|ref|YP_006775434.1| - 1.4e-31 108.1 0.0 1.1e-15 57.2 0.0 2.5 2 0 0 2 2 2 2 Nitrite/Sulfite reductase ferredoxin-like half domain DUF2240 PF09999.9 gi|407464552|ref|YP_006775434.1| - 0.081 12.6 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) Thi4 PF01946.17 gi|407464553|ref|YP_006775435.1| - 7.4e-66 221.7 0.0 8.9e-66 221.5 0.0 1.1 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 gi|407464553|ref|YP_006775435.1| - 2.6e-14 53.2 0.7 6.1e-07 28.9 0.1 3.0 1 1 1 3 3 3 2 FAD binding domain FAD_oxidored PF12831.7 gi|407464553|ref|YP_006775435.1| - 2.8e-10 40.1 0.3 6.8e-10 38.9 0.0 1.8 2 1 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|407464553|ref|YP_006775435.1| - 1.9e-08 33.9 0.0 2.6e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|407464553|ref|YP_006775435.1| - 2.6e-08 34.0 0.0 5.4e-08 33.0 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|407464553|ref|YP_006775435.1| - 2.3e-07 30.4 0.0 3.5e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|407464553|ref|YP_006775435.1| - 4.4e-07 29.0 0.0 6.3e-07 28.4 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein DAO PF01266.24 gi|407464553|ref|YP_006775435.1| - 1.2e-06 28.3 0.5 0.00018 21.3 0.1 2.4 1 1 1 3 3 3 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|407464553|ref|YP_006775435.1| - 2.6e-05 23.7 0.1 3.9e-05 23.1 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|407464553|ref|YP_006775435.1| - 8.6e-05 21.7 0.3 0.00056 19.1 0.3 2.0 1 1 0 1 1 1 1 Lycopene cyclase protein GIDA PF01134.22 gi|407464553|ref|YP_006775435.1| - 0.00011 21.4 0.1 0.00018 20.7 0.1 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|407464553|ref|YP_006775435.1| - 0.0021 18.5 0.5 0.0061 17.1 0.0 2.0 3 0 0 3 3 1 1 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|407464553|ref|YP_006775435.1| - 0.0076 16.5 0.0 0.016 15.4 0.0 1.6 1 0 0 1 1 1 1 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|407464553|ref|YP_006775435.1| - 0.0082 15.5 0.0 0.021 14.1 0.0 1.6 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain GDI PF00996.18 gi|407464553|ref|YP_006775435.1| - 0.013 14.1 0.0 0.022 13.3 0.0 1.3 1 0 0 1 1 1 0 GDP dissociation inhibitor Trp_halogenase PF04820.14 gi|407464553|ref|YP_006775435.1| - 0.015 14.1 0.0 0.89 8.3 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Amino_oxidase PF01593.24 gi|407464553|ref|YP_006775435.1| - 0.026 13.8 0.0 0.042 13.1 0.0 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 gi|407464553|ref|YP_006775435.1| - 0.12 12.4 0.1 0.23 11.4 0.1 1.5 1 0 0 1 1 1 0 FAD-NAD(P)-binding ETRAMP PF09716.10 gi|407464554|ref|YP_006775436.1| - 0.0035 17.4 1.5 0.0054 16.8 1.5 1.3 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) AcylCoA_dehyd_C PF12186.8 gi|407464555|ref|YP_006775437.1| - 0.021 14.9 0.0 0.84 9.8 0.0 2.5 1 1 1 2 2 2 0 Acyl-CoA dehydrogenase C terminal Ldh_1_N PF00056.23 gi|407464556|ref|YP_006775438.1| - 6e-22 78.3 0.1 1.1e-21 77.4 0.1 1.5 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|407464556|ref|YP_006775438.1| - 1.6e-17 63.9 0.1 2.8e-17 63.2 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 gi|407464556|ref|YP_006775438.1| - 2.2e-06 27.3 0.1 6.1e-06 25.9 0.0 1.7 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase Shikimate_DH PF01488.20 gi|407464556|ref|YP_006775438.1| - 0.011 15.8 0.0 0.021 14.9 0.0 1.6 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|407464556|ref|YP_006775438.1| - 0.014 15.6 0.0 0.058 13.7 0.0 2.0 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|407464556|ref|YP_006775438.1| - 0.023 14.6 0.1 0.056 13.3 0.1 1.7 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|407464556|ref|YP_006775438.1| - 0.033 14.2 0.0 0.095 12.7 0.0 1.9 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Usp PF00582.26 gi|407464557|ref|YP_006775439.1| - 2.6e-30 105.8 0.0 3e-30 105.6 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family SRP54 PF00448.22 gi|407464557|ref|YP_006775439.1| - 0.0085 15.7 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain Ribosomal_S30AE PF02482.19 gi|407464558|ref|YP_006775440.1| - 2.5e-05 24.9 0.1 3.1e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein CBS PF00571.28 gi|407464559|ref|YP_006775441.1| - 5.7e-47 158.0 6.1 2.7e-15 56.5 0.2 4.1 4 0 0 4 4 4 4 CBS domain Usp PF00582.26 gi|407464560|ref|YP_006775442.1| - 1.7e-31 109.6 0.0 1.9e-31 109.5 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.26 gi|407464561|ref|YP_006775443.1| - 1.8e-26 93.3 0.0 2.3e-26 93.0 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family CBS PF00571.28 gi|407464562|ref|YP_006775444.1| - 4.3e-28 97.5 3.6 2.5e-14 53.5 0.2 2.1 2 0 0 2 2 2 2 CBS domain CDC37_C PF08564.10 gi|407464562|ref|YP_006775444.1| - 0.033 14.3 0.3 1.7 8.8 0.0 2.3 2 0 0 2 2 2 0 Cdc37 C terminal domain Pyr_redox_2 PF07992.14 gi|407464563|ref|YP_006775445.1| - 3.5e-53 180.8 0.5 4e-53 180.6 0.5 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|407464563|ref|YP_006775445.1| - 1e-26 93.9 3.6 8e-23 81.2 0.2 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|407464563|ref|YP_006775445.1| - 2.6e-18 66.3 1.9 4.2e-17 62.5 0.2 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|407464563|ref|YP_006775445.1| - 2.6e-07 30.1 2.4 0.0037 16.4 0.2 4.0 3 1 1 4 4 4 2 Glucose inhibited division protein A Thi4 PF01946.17 gi|407464563|ref|YP_006775445.1| - 4.4e-06 26.1 0.0 0.0022 17.3 0.1 2.5 2 0 0 2 2 2 2 Thi4 family FAD_binding_2 PF00890.24 gi|407464563|ref|YP_006775445.1| - 5e-06 25.9 4.2 0.00047 19.4 0.1 3.8 3 1 1 4 4 4 1 FAD binding domain K_oxygenase PF13434.6 gi|407464563|ref|YP_006775445.1| - 2.4e-05 23.7 0.2 0.084 12.0 0.0 3.2 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 gi|407464563|ref|YP_006775445.1| - 2.9e-05 23.5 2.3 0.0074 15.6 0.1 2.8 2 1 1 3 3 3 2 FAD binding domain FAD_oxidored PF12831.7 gi|407464563|ref|YP_006775445.1| - 3.9e-05 23.2 0.1 0.00071 19.0 0.1 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|407464563|ref|YP_006775445.1| - 0.00056 18.7 3.8 0.026 13.2 0.1 3.7 3 1 1 4 4 4 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|407464563|ref|YP_006775445.1| - 0.0036 17.5 0.4 0.015 15.5 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 gi|407464563|ref|YP_006775445.1| - 0.013 16.0 0.6 0.055 13.9 0.3 2.2 2 1 0 2 2 2 0 Putative NAD(P)-binding MAF_flag10 PF01973.18 gi|407464563|ref|YP_006775445.1| - 0.022 14.4 0.0 7.6 6.2 0.0 2.7 2 1 0 2 2 2 0 Protein of unknown function DUF115 NAD_binding_9 PF13454.6 gi|407464563|ref|YP_006775445.1| - 0.038 14.0 2.2 14 5.6 0.0 3.3 3 0 0 3 3 3 0 FAD-NAD(P)-binding DAO PF01266.24 gi|407464563|ref|YP_006775445.1| - 0.083 12.5 9.2 1.2 8.7 0.0 3.1 1 1 1 4 4 4 0 FAD dependent oxidoreductase FMO-like PF00743.19 gi|407464563|ref|YP_006775445.1| - 0.1 11.0 0.0 0.2 10.0 0.0 1.5 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like zf-RING_UBOX PF13445.6 gi|407464564|ref|YP_006775446.1| - 0.036 14.1 1.8 1.1 9.4 0.1 2.2 2 0 0 2 2 2 0 RING-type zinc-finger zf-C3HC4_2 PF13923.6 gi|407464564|ref|YP_006775446.1| - 0.054 13.4 1.9 0.66 9.9 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 gi|407464564|ref|YP_006775446.1| - 0.076 12.9 2.7 2.5 8.0 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 gi|407464564|ref|YP_006775446.1| - 0.22 11.7 2.4 2.9 8.1 0.2 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING HIPIP PF01355.17 gi|407464564|ref|YP_006775446.1| - 0.72 10.2 4.6 0.39 11.1 0.2 2.1 1 1 1 2 2 2 0 High potential iron-sulfur protein DUF2847 PF11009.8 gi|407464565|ref|YP_006775447.1| - 0.027 14.4 1.0 0.061 13.2 0.7 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2847) ATP_bind_1 PF03029.17 gi|407464565|ref|YP_006775447.1| - 0.068 12.9 1.2 0.11 12.3 1.2 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein DUF1796 PF08795.10 gi|407464565|ref|YP_006775447.1| - 0.32 10.9 3.8 0.19 11.7 1.4 1.8 1 1 1 2 2 2 0 Putative papain-like cysteine peptidase (DUF1796) PALP PF00291.25 gi|407464566|ref|YP_006775448.1| - 1.8e-62 211.4 0.0 2.5e-62 211.0 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TusA PF01206.17 gi|407464567|ref|YP_006775449.1| - 9.4e-22 76.6 0.0 1.1e-21 76.5 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF1524 PF07510.11 gi|407464568|ref|YP_006775450.1| - 0.0066 16.3 1.4 0.0093 15.9 1.4 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1524) TMF_DNA_bd PF12329.8 gi|407464568|ref|YP_006775450.1| - 0.0069 16.4 6.7 0.025 14.5 0.2 2.6 1 1 1 2 2 2 2 TATA element modulatory factor 1 DNA binding Arf PF00025.21 gi|407464568|ref|YP_006775450.1| - 0.044 13.2 2.3 0.052 13.0 2.2 1.2 1 1 0 1 1 1 0 ADP-ribosylation factor family Zn-ribbon_8 PF09723.10 gi|407464569|ref|YP_006775451.1| - 0.001 19.1 0.1 0.0011 19.0 0.1 1.2 1 0 0 1 1 1 1 Zinc ribbon domain ADK_lid PF05191.14 gi|407464569|ref|YP_006775451.1| - 0.0026 17.7 0.6 0.0033 17.4 0.6 1.1 1 0 0 1 1 1 1 Adenylate kinase, active site lid Rubredoxin_2 PF18073.1 gi|407464569|ref|YP_006775451.1| - 0.0074 16.0 4.0 0.32 10.7 0.4 2.1 2 0 0 2 2 2 2 Rubredoxin metal binding domain zf-C2HC5 PF06221.13 gi|407464569|ref|YP_006775451.1| - 0.021 14.8 0.9 0.022 14.7 0.9 1.1 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type DUF2527 PF10736.9 gi|407464569|ref|YP_006775451.1| - 0.033 14.0 0.1 0.05 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) RecR PF02132.15 gi|407464569|ref|YP_006775451.1| - 0.044 13.4 3.3 0.21 11.2 3.6 1.8 1 1 0 1 1 1 0 RecR protein HypA PF01155.19 gi|407464569|ref|YP_006775451.1| - 0.046 13.7 0.3 0.046 13.7 0.3 1.0 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|407464569|ref|YP_006775451.1| - 0.058 12.8 3.0 4.4 6.9 0.3 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-H2C2 PF09337.10 gi|407464569|ref|YP_006775451.1| - 0.08 13.2 0.2 0.08 13.2 0.2 1.8 2 0 0 2 2 2 0 H2C2 zinc finger Rtf2 PF04641.12 gi|407464569|ref|YP_006775451.1| - 0.1 11.9 0.8 0.094 12.1 0.8 1.0 1 0 0 1 1 1 0 Rtf2 RING-finger Integrase_Zn PF02022.19 gi|407464569|ref|YP_006775451.1| - 0.16 11.9 3.1 0.53 10.3 0.3 2.1 2 0 0 2 2 2 0 Integrase Zinc binding domain Na_sulph_symp PF00939.19 gi|407464571|ref|YP_006775453.1| - 3.1e-57 194.7 50.9 3.8e-57 194.4 50.9 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 gi|407464571|ref|YP_006775453.1| - 5.4e-34 117.8 47.3 5.4e-34 117.8 47.3 2.0 1 1 1 2 2 2 1 Citrate transporter DUF1206 PF06724.11 gi|407464571|ref|YP_006775453.1| - 3.9 7.6 8.2 2 8.6 2.0 3.5 3 0 0 3 3 3 0 Domain of Unknown Function (DUF1206) P-II PF00543.22 gi|407464573|ref|YP_006775455.1| - 3.8e-11 43.5 0.7 5.9e-11 42.9 0.7 1.3 1 1 0 1 1 1 1 Nitrogen regulatory protein P-II CybS PF05328.12 gi|407464573|ref|YP_006775455.1| - 0.095 12.4 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit TrmB PF01978.19 gi|407464574|ref|YP_006775456.1| - 0.05 13.5 0.0 0.22 11.4 0.0 2.0 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF2841 PF11001.8 gi|407464574|ref|YP_006775456.1| - 0.097 12.7 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2841) Response_reg PF00072.24 gi|407464575|ref|YP_006775457.1| - 2e-20 73.0 1.1 2.2e-20 72.9 0.3 1.5 2 0 0 2 2 2 1 Response regulator receiver domain NitrOD1 PF18549.1 gi|407464575|ref|YP_006775457.1| - 3.4e-05 23.7 0.0 5.6e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Nitrosopumilus output domain 1 B12-binding PF02310.19 gi|407464575|ref|YP_006775457.1| - 0.08 13.0 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 B12 binding domain RepC PF06504.11 gi|407464577|ref|YP_006775459.1| - 0.037 13.2 0.0 0.051 12.8 0.0 1.1 1 0 0 1 1 1 0 Replication protein C (RepC) Gln_deamidase_2 PF18626.1 gi|407464577|ref|YP_006775459.1| - 0.055 13.7 0.2 0.1 12.8 0.2 1.5 1 0 0 1 1 1 0 Glutaminase DZR PF12773.7 gi|407464578|ref|YP_006775460.1| - 0.0096 15.9 0.2 0.015 15.3 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon Tnp_zf-ribbon_2 PF13842.6 gi|407464578|ref|YP_006775460.1| - 0.016 16.0 0.5 2.6 8.9 0.0 2.2 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon NPL4 PF05021.15 gi|407464578|ref|YP_006775460.1| - 0.024 14.0 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 NPL4 family TF_Zn_Ribbon PF08271.12 gi|407464578|ref|YP_006775460.1| - 0.033 13.7 1.3 0.11 12.1 1.3 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding zf_UBZ PF18439.1 gi|407464578|ref|YP_006775460.1| - 0.046 13.3 2.9 2.2 8.0 0.2 2.4 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger NOB1_Zn_bind PF08772.11 gi|407464578|ref|YP_006775460.1| - 0.073 13.2 0.9 0.62 10.3 0.1 2.1 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like DASH_Ask1 PF08655.10 gi|407464578|ref|YP_006775460.1| - 0.083 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 DASH complex subunit Ask1 zf-LITAF-like PF10601.9 gi|407464578|ref|YP_006775460.1| - 0.15 12.4 2.7 9.7 6.5 0.2 2.2 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|407464578|ref|YP_006775460.1| - 0.73 10.0 4.5 6.5 7.0 0.4 2.2 2 0 0 2 2 2 0 Zinc ribbon domain Spore_GerAC PF05504.11 gi|407464579|ref|YP_006775461.1| - 0.0023 18.2 2.2 0.0037 17.5 2.2 1.3 1 0 0 1 1 1 1 Spore germination B3/ GerAC like, C-terminal PP2C_C PF07830.13 gi|407464579|ref|YP_006775461.1| - 0.019 15.4 0.4 0.034 14.6 0.4 1.4 1 0 0 1 1 1 0 Protein serine/threonine phosphatase 2C, C-terminal domain DUF4083 PF13314.6 gi|407464579|ref|YP_006775461.1| - 8.3 6.4 6.6 3.3 7.7 1.8 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4083) FOXP-CC PF16159.5 gi|407464580|ref|YP_006775462.1| - 0.0085 16.7 0.0 0.01 16.5 0.0 1.2 1 0 0 1 1 1 1 FOXP coiled-coil domain zf-Di19 PF05605.12 gi|407464580|ref|YP_006775462.1| - 0.01 16.1 0.1 0.015 15.6 0.1 1.3 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding DUF4729 PF15866.5 gi|407464580|ref|YP_006775462.1| - 0.011 15.1 0.1 0.011 15.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4729) GCD14 PF08704.10 gi|407464581|ref|YP_006775463.1| - 2.2e-36 125.8 0.4 3.7e-36 125.1 0.4 1.5 1 1 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 gi|407464581|ref|YP_006775463.1| - 3.3e-10 40.1 0.1 5e-10 39.5 0.1 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|407464581|ref|YP_006775463.1| - 1.9e-08 34.3 0.0 3.1e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407464581|ref|YP_006775463.1| - 1.1e-07 32.5 0.0 2e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|407464581|ref|YP_006775463.1| - 4.4e-07 29.5 0.0 6.2e-07 29.0 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_24 PF13578.6 gi|407464581|ref|YP_006775463.1| - 6.9e-07 30.3 0.0 1.4e-06 29.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|407464581|ref|YP_006775463.1| - 1e-05 25.3 0.0 2.3e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F PrmA PF06325.13 gi|407464581|ref|YP_006775463.1| - 4.9e-05 22.9 0.0 7.6e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.20 gi|407464581|ref|YP_006775463.1| - 5.7e-05 22.3 0.0 9.5e-05 21.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|407464581|ref|YP_006775463.1| - 7.2e-05 23.4 0.0 0.00014 22.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|407464581|ref|YP_006775463.1| - 9.6e-05 21.6 0.1 0.00015 21.0 0.1 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_12 PF08242.12 gi|407464581|ref|YP_006775463.1| - 0.00016 22.3 0.0 0.00037 21.2 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain GCD14_N PF14801.6 gi|407464581|ref|YP_006775463.1| - 0.00018 21.3 0.0 0.00046 20.0 0.0 1.7 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit N-term Fibrillarin PF01269.17 gi|407464581|ref|YP_006775463.1| - 0.00039 19.6 0.0 0.00053 19.2 0.0 1.4 1 0 0 1 1 1 1 Fibrillarin MTS PF05175.14 gi|407464581|ref|YP_006775463.1| - 0.00051 19.6 0.1 0.0014 18.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_16 PF10294.9 gi|407464581|ref|YP_006775463.1| - 0.0012 18.6 0.1 0.0027 17.5 0.0 1.6 2 0 0 2 2 1 1 Lysine methyltransferase Methyltransf_18 PF12847.7 gi|407464581|ref|YP_006775463.1| - 0.0048 16.9 0.8 0.01 15.8 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain Met_10 PF02475.16 gi|407464581|ref|YP_006775463.1| - 0.017 14.9 0.1 0.026 14.3 0.1 1.3 1 0 0 1 1 1 0 Met-10+ like-protein CMAS PF02353.20 gi|407464581|ref|YP_006775463.1| - 0.026 13.8 0.0 0.042 13.1 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DUF43 PF01861.16 gi|407464581|ref|YP_006775463.1| - 0.03 13.5 0.0 0.06 12.6 0.0 1.5 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain UPF0020 PF01170.18 gi|407464581|ref|YP_006775463.1| - 0.049 13.3 0.0 0.092 12.4 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 DUF938 PF06080.12 gi|407464581|ref|YP_006775463.1| - 0.066 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF938) ECD PF18432.1 gi|407464581|ref|YP_006775463.1| - 0.088 12.8 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Extracellular Cadherin domain Methyltransf_23 PF13489.6 gi|407464581|ref|YP_006775463.1| - 0.14 12.0 0.0 0.25 11.2 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain Carb_kinase PF01256.17 gi|407464582|ref|YP_006775464.1| - 5.4e-48 163.6 0.3 6.4e-48 163.4 0.3 1.0 1 0 0 1 1 1 1 Carbohydrate kinase HK PF02110.15 gi|407464582|ref|YP_006775464.1| - 7.8e-11 41.8 0.0 1.6e-10 40.8 0.0 1.4 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|407464582|ref|YP_006775464.1| - 1.3e-05 24.7 0.0 2e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Peptidase_M20 PF01546.28 gi|407464583|ref|YP_006775465.1| - 7.9e-33 113.9 0.0 1e-32 113.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|407464583|ref|YP_006775465.1| - 5.5e-11 42.3 0.0 1.2e-10 41.3 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Tox-PL-2 PF15643.6 gi|407464583|ref|YP_006775465.1| - 0.028 14.5 0.0 0.064 13.4 0.0 1.6 1 0 0 1 1 1 0 Papain fold toxin 2 DoxX PF07681.12 gi|407464584|ref|YP_006775466.1| - 9e-15 55.0 3.7 1.6e-14 54.3 3.7 1.4 1 0 0 1 1 1 1 DoxX DoxD PF04173.13 gi|407464584|ref|YP_006775466.1| - 0.00011 22.1 5.7 0.00021 21.2 5.3 1.5 1 1 1 2 2 2 1 TQO small subunit DoxD DoxX_2 PF13564.6 gi|407464584|ref|YP_006775466.1| - 0.0002 21.4 1.7 0.00028 20.9 1.7 1.3 1 1 0 1 1 1 1 DoxX-like family Proteasome PF00227.26 gi|407464585|ref|YP_006775467.1| - 6.6e-46 156.2 0.0 7.4e-46 156.0 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit PUA PF01472.20 gi|407464586|ref|YP_006775468.1| - 1.4e-17 63.4 0.2 2e-17 62.9 0.2 1.3 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|407464586|ref|YP_006775468.1| - 0.011 15.9 0.1 0.018 15.3 0.1 1.4 1 0 0 1 1 1 0 UPF0113 PUA domain DUF5121 PF17165.4 gi|407464586|ref|YP_006775468.1| - 0.12 12.8 0.0 1 9.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5121) DUF5597 PF18120.1 gi|407464586|ref|YP_006775468.1| - 0.12 12.5 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5597) Homoserine_dh PF00742.19 gi|407464587|ref|YP_006775469.1| - 3.7e-55 186.5 0.1 6.5e-55 185.7 0.1 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|407464587|ref|YP_006775469.1| - 8.7e-09 36.1 0.0 1.9e-08 35.0 0.0 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|407464587|ref|YP_006775469.1| - 1.5e-07 31.4 0.1 3.6e-07 30.2 0.1 1.6 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFO_IDH_MocA PF01408.22 gi|407464587|ref|YP_006775469.1| - 0.15 12.9 0.0 0.28 12.0 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold SelR PF01641.18 gi|407464588|ref|YP_006775470.1| - 7.4e-55 184.2 0.4 8.5e-55 184.0 0.4 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 gi|407464588|ref|YP_006775470.1| - 0.0029 17.8 2.0 0.0087 16.3 2.0 1.7 1 1 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly ADD_ATRX PF17981.1 gi|407464588|ref|YP_006775470.1| - 0.011 15.6 0.3 3.9 7.4 0.0 2.3 2 0 0 2 2 2 0 Cysteine Rich ADD domain HECT_2 PF09814.9 gi|407464588|ref|YP_006775470.1| - 0.037 12.9 1.6 0.48 9.2 0.1 2.0 1 1 1 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding zinc_ribbon_2 PF13240.6 gi|407464588|ref|YP_006775470.1| - 1.3 8.8 9.5 6.2 6.7 1.1 3.3 3 0 0 3 3 3 0 zinc-ribbon domain Thy1 PF02511.15 gi|407464589|ref|YP_006775471.1| - 1.3e-33 116.4 1.1 6.4e-17 62.0 0.6 2.2 2 0 0 2 2 2 2 Thymidylate synthase complementing protein Hrs_helical PF12210.8 gi|407464589|ref|YP_006775471.1| - 0.56 10.8 4.1 9.3 6.9 0.6 3.8 4 0 0 4 4 4 0 Hepatocyte growth factor-regulated tyrosine kinase substrate CdvA PF18822.1 gi|407464591|ref|YP_006775473.1| - 2.8e-32 111.2 7.7 4.4e-32 110.5 7.7 1.3 1 0 0 1 1 1 1 CdvA-like coiled-coil domain CBFD_NFYB_HMF PF00808.23 gi|407464591|ref|YP_006775473.1| - 0.0075 16.5 0.6 0.017 15.4 0.6 1.7 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone ABC_tran_CTD PF16326.5 gi|407464591|ref|YP_006775473.1| - 0.13 12.6 8.1 0.52 10.6 1.4 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain Prominin PF05478.11 gi|407464591|ref|YP_006775473.1| - 0.68 7.8 5.8 0.89 7.4 5.8 1.1 1 0 0 1 1 1 0 Prominin FliT PF05400.13 gi|407464591|ref|YP_006775473.1| - 2.1 9.2 9.2 4.7 8.1 2.9 2.8 2 1 1 3 3 3 0 Flagellar protein FliT AMP-binding PF00501.28 gi|407464592|ref|YP_006775474.1| - 7.8e-93 311.3 0.0 9.5e-93 311.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|407464592|ref|YP_006775474.1| - 2.9e-27 95.5 0.1 6.8e-27 94.3 0.1 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|407464592|ref|YP_006775474.1| - 2.4e-17 62.6 4.1 5.5e-17 61.4 4.1 1.6 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus PAS PF00989.25 gi|407464593|ref|YP_006775475.1| - 4.1e-10 39.6 0.1 8.6e-10 38.6 0.0 1.5 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|407464593|ref|YP_006775475.1| - 1.1e-08 35.3 0.3 2.2e-08 34.3 0.1 1.6 1 1 1 2 2 2 1 PAS domain PAS_3 PF08447.12 gi|407464593|ref|YP_006775475.1| - 2.5e-05 24.5 0.0 3.9e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|407464593|ref|YP_006775475.1| - 0.00021 21.5 0.0 0.00028 21.1 0.0 1.1 1 0 0 1 1 1 1 PAS fold Phage_TTP_12 PF16461.5 gi|407464593|ref|YP_006775475.1| - 0.027 14.1 0.4 0.063 13.0 0.1 1.7 1 1 1 2 2 2 0 Lambda phage tail tube protein, TTP DNA_pack_N PF02500.15 gi|407464593|ref|YP_006775475.1| - 0.071 12.9 0.7 0.9 9.3 0.0 2.3 1 1 1 2 2 2 0 Probable DNA packing protein, N-terminus PheRS_DBD2 PF18554.1 gi|407464593|ref|YP_006775475.1| - 1.7 8.7 6.3 1.3 9.1 0.5 2.4 2 0 0 2 2 2 0 PheRS DNA binding domain 2 XPG_I PF00867.18 gi|407464594|ref|YP_006775476.1| - 2.6e-23 82.2 0.0 5.9e-23 81.0 0.0 1.6 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 gi|407464594|ref|YP_006775476.1| - 2.5e-21 76.0 0.0 9e-21 74.3 0.0 1.9 2 0 0 2 2 2 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|407464594|ref|YP_006775476.1| - 1e-05 26.1 0.0 3.1e-05 24.5 0.0 1.9 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 gi|407464594|ref|YP_006775476.1| - 0.033 14.8 0.0 0.089 13.4 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|407464594|ref|YP_006775476.1| - 0.054 13.6 0.0 0.77 9.9 0.0 2.8 2 0 0 2 2 2 0 Helix-hairpin-helix motif DUF4878 PF12870.7 gi|407464594|ref|YP_006775476.1| - 0.44 10.9 3.2 0.3 11.4 0.7 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4878) Mad3_BUB1_II PF08171.11 gi|407464596|ref|YP_006775478.1| - 0.016 15.3 0.1 0.028 14.6 0.1 1.4 1 0 0 1 1 1 0 Mad3/BUB1 homology region 2 Nitroreductase PF00881.24 gi|407464598|ref|YP_006775480.1| - 8.4e-26 91.0 0.1 3.9e-14 53.1 0.0 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|407464598|ref|YP_006775480.1| - 1.1e-10 41.4 0.1 6.6e-08 32.4 0.1 2.9 1 1 0 1 1 1 1 Putative TM nitroreductase AsnC_trans_reg PF01037.21 gi|407464599|ref|YP_006775481.1| - 1.4e-09 37.8 0.1 1.6e-09 37.6 0.1 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|407464599|ref|YP_006775481.1| - 0.039 14.0 0.5 0.058 13.5 0.5 1.2 1 0 0 1 1 1 0 NapD protein LAGLIDADG_WhiA PF14527.6 gi|407464599|ref|YP_006775481.1| - 0.065 13.3 0.2 0.11 12.6 0.2 1.4 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain GTP_EFTU PF00009.27 gi|407464600|ref|YP_006775482.1| - 0.097 12.2 0.1 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Polyketide_cyc2 PF10604.9 gi|407464602|ref|YP_006775484.1| - 7.1e-16 58.8 0.0 8.5e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|407464602|ref|YP_006775484.1| - 0.043 14.0 0.0 0.054 13.7 0.0 1.2 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport Spc7 PF08317.11 gi|407464603|ref|YP_006775485.1| - 2.3e-05 23.5 24.6 8.6e-05 21.6 1.7 2.4 3 0 0 3 3 3 2 Spc7 kinetochore protein APG6_N PF17675.1 gi|407464603|ref|YP_006775485.1| - 0.0018 18.8 19.6 0.047 14.2 0.3 2.7 3 0 0 3 3 3 2 Apg6 coiled-coil region PRD_Mga PF08270.11 gi|407464603|ref|YP_006775485.1| - 0.0035 17.1 2.1 0.0035 17.1 2.1 3.0 1 1 0 2 2 2 1 M protein trans-acting positive regulator (MGA) PRD domain T3SSipB PF16535.5 gi|407464603|ref|YP_006775485.1| - 0.02 15.4 10.3 0.17 12.4 6.0 2.8 2 1 0 2 2 2 0 Type III cell invasion protein SipB NPV_P10 PF05531.12 gi|407464603|ref|YP_006775485.1| - 0.042 14.3 20.8 0.31 11.5 0.7 5.3 4 1 1 5 5 5 0 Nucleopolyhedrovirus P10 protein Baculo_PEP_C PF04513.12 gi|407464603|ref|YP_006775485.1| - 0.048 13.7 25.4 0.076 13.1 1.1 4.5 2 1 2 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus Endotoxin_C2 PF18449.1 gi|407464603|ref|YP_006775485.1| - 0.048 14.0 10.7 0.56 10.6 0.8 4.1 2 1 1 3 3 3 0 Delta endotoxin DUF948 PF06103.11 gi|407464603|ref|YP_006775485.1| - 0.058 13.6 13.6 1.8 8.9 0.0 4.9 5 1 0 5 5 5 0 Bacterial protein of unknown function (DUF948) MCPsignal PF00015.21 gi|407464603|ref|YP_006775485.1| - 0.13 12.1 11.0 0.75 9.6 0.1 3.5 3 1 1 4 4 4 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF4298 PF14131.6 gi|407464603|ref|YP_006775485.1| - 0.28 11.2 14.3 9.5 6.3 0.2 5.0 3 1 1 4 4 4 0 Domain of unknown function (DUF4298) MscS_porin PF12795.7 gi|407464603|ref|YP_006775485.1| - 0.49 9.9 17.6 0.31 10.5 10.4 2.9 2 1 1 3 3 3 0 Mechanosensitive ion channel porin domain Nup54 PF13874.6 gi|407464603|ref|YP_006775485.1| - 0.77 9.9 6.4 28 4.8 0.0 3.9 2 1 1 3 3 3 0 Nucleoporin complex subunit 54 ABC_tran_CTD PF16326.5 gi|407464603|ref|YP_006775485.1| - 0.88 9.9 16.0 4.1 7.7 1.5 4.3 2 2 2 4 4 4 0 ABC transporter C-terminal domain YtxH PF12732.7 gi|407464603|ref|YP_006775485.1| - 1.1 9.8 9.6 19 5.9 0.2 4.0 2 2 0 2 2 2 0 YtxH-like protein PCRF PF03462.18 gi|407464603|ref|YP_006775485.1| - 1.2 9.0 18.8 0.25 11.2 1.3 3.3 3 1 0 3 3 2 0 PCRF domain CREPT PF16566.5 gi|407464603|ref|YP_006775485.1| - 1.2 9.3 16.1 1.5 9.0 4.3 3.4 3 2 0 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour Sec34 PF04136.15 gi|407464603|ref|YP_006775485.1| - 2 8.3 24.9 0.48 10.3 0.2 4.5 2 1 3 5 5 5 0 Sec34-like family SRP1_TIP1 PF00660.17 gi|407464603|ref|YP_006775485.1| - 2 8.5 7.1 0.42 10.7 0.4 3.1 2 2 1 3 3 3 0 Seripauperin and TIP1 family Peptidase_M2 PF01401.18 gi|407464603|ref|YP_006775485.1| - 2.5 6.6 9.2 0.23 10.0 3.3 1.9 1 1 1 2 2 2 0 Angiotensin-converting enzyme DHR10 PF18595.1 gi|407464603|ref|YP_006775485.1| - 2.6 8.1 16.4 5.6 7.1 6.9 3.6 2 2 1 3 3 3 0 Designed helical repeat protein 10 domain Herpes_UL14 PF03580.14 gi|407464603|ref|YP_006775485.1| - 5.3 7.3 11.4 0.9 9.8 0.1 2.9 3 1 0 3 3 2 0 Herpesvirus UL14-like protein Apolipoprotein PF01442.18 gi|407464603|ref|YP_006775485.1| - 6.2 6.7 9.6 5.6 6.8 0.3 3.1 3 1 0 3 3 3 0 Apolipoprotein A1/A4/E domain DUF2203 PF09969.9 gi|407464603|ref|YP_006775485.1| - 7.4 7.3 13.2 13 6.5 0.4 4.0 3 2 1 4 4 4 0 Uncharacterized conserved protein (DUF2203) YkyA PF10368.9 gi|407464603|ref|YP_006775485.1| - 9.7 5.8 30.4 23 4.6 13.3 3.6 1 1 0 2 2 2 0 Putative cell-wall binding lipoprotein Prok-JAB PF14464.6 gi|407464604|ref|YP_006775486.1| - 3.5e-12 46.1 0.0 5.7e-12 45.4 0.0 1.4 1 1 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.15 gi|407464604|ref|YP_006775486.1| - 0.022 14.7 0.1 0.035 14.0 0.1 1.3 1 0 0 1 1 1 0 RadC-like JAB domain Peptidase_C74 PF12387.8 gi|407464605|ref|YP_006775487.1| - 0.067 12.7 1.7 0.1 12.0 1.7 1.2 1 0 0 1 1 1 0 Pestivirus NS2 peptidase zf-NADH-PPase PF09297.11 gi|407464605|ref|YP_006775487.1| - 0.069 12.8 0.7 0.069 12.8 0.7 2.1 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF4191 PF13829.6 gi|407464605|ref|YP_006775487.1| - 0.21 10.9 0.4 0.25 10.7 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) zf_UBZ PF18439.1 gi|407464605|ref|YP_006775487.1| - 0.35 10.5 1.0 0.81 9.3 0.1 1.9 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Zn_ribbon_recom PF13408.6 gi|407464605|ref|YP_006775487.1| - 0.63 10.6 6.6 5.1 7.7 5.7 2.3 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain Zn-ribbon_8 PF09723.10 gi|407464605|ref|YP_006775487.1| - 0.96 9.6 4.0 4.1 7.6 4.0 1.9 1 1 0 1 1 1 0 Zinc ribbon domain DUF5443 PF17518.2 gi|407464606|ref|YP_006775488.1| - 0.0035 16.3 0.6 0.0041 16.1 0.6 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5443) DUF3081 PF11280.8 gi|407464606|ref|YP_006775488.1| - 0.025 14.4 0.0 0.3 11.0 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3081) BPD_transp_1 PF00528.22 gi|407464607|ref|YP_006775489.1| - 3e-25 89.0 9.4 3e-25 89.0 9.4 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|407464607|ref|YP_006775489.1| - 0.06 13.3 0.0 0.06 13.3 0.0 2.8 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|407464608|ref|YP_006775490.1| - 2.1e-34 118.9 21.2 2.1e-34 118.9 21.2 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF5400 PF17379.2 gi|407464608|ref|YP_006775490.1| - 0.0015 18.9 0.2 0.0015 18.9 0.2 2.5 3 0 0 3 3 3 1 Family of unknown function (DUF5400) DUF3481 PF11980.8 gi|407464608|ref|YP_006775490.1| - 0.29 10.9 1.4 11 5.8 0.1 2.8 2 0 0 2 2 2 0 C-terminal domain of neuropilin glycoprotein zinc_ribbon_6 PF14599.6 gi|407464609|ref|YP_006775491.1| - 0.066 13.2 15.8 0.64 10.1 2.6 3.5 2 2 2 4 4 4 0 Zinc-ribbon C1_1 PF00130.22 gi|407464609|ref|YP_006775491.1| - 0.24 11.3 12.0 1.2 9.1 2.9 2.3 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Molybdop_Fe4S4 PF04879.16 gi|407464609|ref|YP_006775491.1| - 0.26 11.3 9.6 0.51 10.4 1.5 2.2 2 0 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain DNA_RNApol_7kD PF03604.13 gi|407464609|ref|YP_006775491.1| - 0.37 10.5 19.3 2 8.2 5.7 2.9 2 2 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit DUF1059 PF06348.11 gi|407464609|ref|YP_006775491.1| - 0.43 10.8 7.2 2.7 8.3 1.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1059) SCIFF PF13165.6 gi|407464609|ref|YP_006775491.1| - 1.2 9.1 12.0 1.6 8.7 0.4 3.1 4 0 0 4 4 4 0 Six-cysteine peptide SCIFF Zn_ribbon_SprT PF17283.2 gi|407464609|ref|YP_006775491.1| - 1.3 9.0 12.3 1.4 8.9 2.6 2.4 2 0 0 2 2 2 0 SprT-like zinc ribbon domain T4_baseplate PF12322.8 gi|407464609|ref|YP_006775491.1| - 2.7 7.4 4.2 5.5 6.4 0.6 2.1 2 0 0 2 2 2 0 T4 bacteriophage base plate protein LIM PF00412.22 gi|407464609|ref|YP_006775491.1| - 7.5 6.9 15.0 7.1 6.9 3.4 2.3 2 0 0 2 2 2 0 LIM domain FoP_duplication PF13865.6 gi|407464609|ref|YP_006775491.1| - 8.3 7.0 8.5 11 6.6 8.5 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 DUF2196 PF09962.9 gi|407464610|ref|YP_006775492.1| - 2.5e-28 97.8 2.0 2.8e-28 97.7 2.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) ArsC PF03960.15 gi|407464612|ref|YP_006775494.1| - 2.1e-13 50.0 1.0 3.2e-13 49.5 1.0 1.3 1 1 0 1 1 1 1 ArsC family Glutaredoxin PF00462.24 gi|407464612|ref|YP_006775494.1| - 0.00012 22.3 2.5 0.0018 18.4 0.2 2.1 1 1 1 2 2 2 1 Glutaredoxin NPA PF16469.5 gi|407464612|ref|YP_006775494.1| - 0.033 14.8 2.0 0.049 14.2 1.8 1.3 1 1 0 1 1 1 0 Nematode polyprotein allergen ABA-1 Thioredoxin_2 PF13098.6 gi|407464612|ref|YP_006775494.1| - 0.046 14.2 0.1 0.055 13.9 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain PriCT_1 PF08708.11 gi|407464612|ref|YP_006775494.1| - 0.098 12.4 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) CarboxypepD_reg PF13620.6 gi|407464613|ref|YP_006775495.1| - 3.4e-05 24.0 1.6 7.1e-05 23.0 1.6 1.5 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain PAC2 PF09754.9 gi|407464615|ref|YP_006775497.1| - 2.5e-26 93.0 0.0 2.8e-26 92.8 0.0 1.0 1 0 0 1 1 1 1 PAC2 family SNF2_N PF00176.23 gi|407464616|ref|YP_006775498.1| - 1.6e-36 125.7 0.1 2.5e-36 125.1 0.1 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 gi|407464616|ref|YP_006775498.1| - 1.1e-11 45.1 0.9 5e-11 42.9 0.1 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|407464616|ref|YP_006775498.1| - 2.2e-08 34.3 0.0 2.2e-08 34.3 0.0 2.5 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|407464616|ref|YP_006775498.1| - 1.7e-05 24.7 0.2 6e-05 22.9 0.0 2.0 2 1 1 3 3 3 1 DEAD/DEAH box helicase PHM7_cyt PF14703.6 gi|407464616|ref|YP_006775498.1| - 2.4 8.4 10.0 0.39 10.9 4.0 2.7 2 1 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Sod_Fe_C PF02777.18 gi|407464618|ref|YP_006775500.1| - 6.2e-39 132.3 2.3 1.1e-38 131.5 2.3 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|407464618|ref|YP_006775500.1| - 2.7e-24 85.4 0.0 5.5e-24 84.4 0.0 1.5 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain DUF1176 PF06674.11 gi|407464619|ref|YP_006775501.1| - 0.036 13.5 0.0 0.057 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1176) Mad3_BUB1_II PF08171.11 gi|407464620|ref|YP_006775502.1| - 0.018 15.2 0.0 0.035 14.3 0.0 1.5 1 0 0 1 1 1 0 Mad3/BUB1 homology region 2 DUF4093 PF13331.6 gi|407464620|ref|YP_006775502.1| - 0.11 12.9 0.1 3.4 8.2 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4093) Ornatin PF02088.15 gi|407464622|ref|YP_006775504.1| - 0.016 15.0 3.5 0.023 14.4 3.5 1.4 1 1 0 1 1 1 0 Ornatin Bac_globin PF01152.21 gi|407464622|ref|YP_006775504.1| - 0.033 14.3 0.0 0.035 14.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial-like globin ASH PF15780.5 gi|407464623|ref|YP_006775505.1| - 0.024 14.8 0.2 0.034 14.3 0.2 1.3 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF1425 PF07233.12 gi|407464623|ref|YP_006775505.1| - 0.069 13.0 0.2 0.093 12.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1425) TMEM131_like PF12371.8 gi|407464623|ref|YP_006775505.1| - 0.074 13.3 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Transmembrane protein 131-like Transferrin PF00405.17 gi|407464623|ref|YP_006775505.1| - 0.095 11.8 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Transferrin FAD-oxidase_C PF02913.19 gi|407464624|ref|YP_006775506.1| - 1.6e-43 149.1 0.0 2.1e-43 148.8 0.0 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|407464624|ref|YP_006775506.1| - 1.3e-30 105.9 0.0 4.1e-30 104.3 0.0 1.8 2 0 0 2 2 2 1 FAD binding domain Cytokin-bind PF09265.10 gi|407464624|ref|YP_006775506.1| - 0.0049 16.3 0.2 0.016 14.6 0.0 1.9 2 0 0 2 2 2 1 Cytokinin dehydrogenase 1, FAD and cytokinin binding PDEase_I PF00233.19 gi|407464625|ref|YP_006775507.1| - 0.0093 15.7 0.3 0.0093 15.7 0.3 2.0 3 0 0 3 3 3 1 3'5'-cyclic nucleotide phosphodiesterase HD PF01966.22 gi|407464625|ref|YP_006775507.1| - 0.049 13.8 0.0 0.12 12.6 0.0 1.7 1 0 0 1 1 1 0 HD domain Phage_integrase PF00589.22 gi|407464626|ref|YP_006775508.1| - 1.1e-06 28.5 0.1 2.5e-06 27.4 0.1 1.6 1 0 0 1 1 1 1 Phage integrase family Cuticle_2 PF08184.11 gi|407464626|ref|YP_006775508.1| - 0.098 12.7 1.7 0.14 12.2 0.3 1.9 2 0 0 2 2 2 0 Cuticle protein 7 isoform family Phage_int_SAM_5 PF13102.6 gi|407464626|ref|YP_006775508.1| - 0.12 12.8 7.5 0.072 13.4 1.1 3.2 2 1 0 2 2 2 0 Phage integrase SAM-like domain Mga PF05043.13 gi|407464626|ref|YP_006775508.1| - 0.16 12.6 5.4 3.4 8.3 2.4 3.4 2 1 1 3 3 3 0 Mga helix-turn-helix domain MADF_DNA_bdg PF10545.9 gi|407464627|ref|YP_006775509.1| - 0.096 13.0 0.6 0.53 10.6 0.0 2.1 2 0 0 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like DUF1264 PF06884.11 gi|407464628|ref|YP_006775510.1| - 0.11 12.0 0.1 6.9 6.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1264) ParBc PF02195.18 gi|407464629|ref|YP_006775511.1| - 3.9e-05 23.9 0.1 0.00015 22.0 0.0 1.9 2 0 0 2 2 2 1 ParB-like nuclease domain LLC1 PF14945.6 gi|407464629|ref|YP_006775511.1| - 0.24 12.0 0.7 0.88 10.2 0.1 2.0 2 0 0 2 2 2 0 Normal lung function maintenance, Low in Lung Cancer 1 protein zinc_ribbon_2 PF13240.6 gi|407464630|ref|YP_006775512.1| - 0.014 15.1 0.5 0.042 13.6 0.5 1.7 1 0 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|407464630|ref|YP_006775512.1| - 0.019 14.4 1.7 0.028 13.8 0.3 2.0 2 0 0 2 2 2 0 zinc-ribbon domain Cys_rich_CPXG PF14255.6 gi|407464630|ref|YP_006775512.1| - 2.3 8.2 6.6 0.29 11.0 1.2 2.2 3 0 0 3 3 3 0 Cysteine-rich CPXCG DUF4490 PF14892.6 gi|407464631|ref|YP_006775513.1| - 0.0086 16.1 1.5 0.17 11.9 0.4 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4490) Nudix_N PF12535.8 gi|407464633|ref|YP_006775515.1| - 0.077 12.6 0.3 0.15 11.6 0.3 1.5 1 0 0 1 1 1 0 Hydrolase of X-linked nucleoside diphosphate N terminal FixG_C PF11614.8 gi|407464635|ref|YP_006775517.1| - 0.034 14.4 0.1 0.064 13.5 0.1 1.4 1 0 0 1 1 1 0 IG-like fold at C-terminal of FixG, putative oxidoreductase PapD_N PF00345.20 gi|407464635|ref|YP_006775517.1| - 0.056 13.4 0.1 0.11 12.4 0.1 1.4 1 0 0 1 1 1 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain Prominin PF05478.11 gi|407464639|ref|YP_006775521.1| - 0.21 9.5 10.4 0.0089 14.0 4.1 1.7 2 0 0 2 2 2 0 Prominin CdiA_C PF18451.1 gi|407464639|ref|YP_006775521.1| - 0.35 11.1 12.3 1.7 8.9 2.5 3.0 3 0 0 3 3 3 0 Contact-dependent growth inhibition CdiA C-terminal domain DUF5339 PF17274.2 gi|407464639|ref|YP_006775521.1| - 0.95 10.4 11.4 3.7 8.5 0.2 3.9 3 0 0 3 3 3 0 Family of unknown function (DUF5339) DUF4354 PF14263.6 gi|407464640|ref|YP_006775522.1| - 0.037 13.8 0.0 0.071 12.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) DUF3821 PF12863.7 gi|407464640|ref|YP_006775522.1| - 0.059 13.3 0.1 0.069 13.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3821) FlgD_ig PF13860.6 gi|407464640|ref|YP_006775522.1| - 0.14 12.1 0.0 0.47 10.4 0.0 1.8 2 0 0 2 2 2 0 FlgD Ig-like domain DUF2838 PF10998.8 gi|407464641|ref|YP_006775523.1| - 0.044 14.0 0.2 0.056 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) DUF2207 PF09972.9 gi|407464641|ref|YP_006775523.1| - 2.7 6.6 4.4 1.8 7.2 0.0 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) HTH_24 PF13412.6 gi|407464642|ref|YP_006775524.1| - 9e-06 25.2 0.1 2.2e-05 23.9 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|407464642|ref|YP_006775524.1| - 2.9e-05 23.8 0.9 0.00011 22.0 0.2 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.17 gi|407464642|ref|YP_006775524.1| - 0.0001 22.1 2.0 0.00019 21.2 2.0 1.4 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_Mga PF08280.11 gi|407464642|ref|YP_006775524.1| - 0.00084 19.3 1.7 0.0015 18.5 1.3 1.7 1 1 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_45 PF14947.6 gi|407464642|ref|YP_006775524.1| - 0.0041 17.1 4.4 0.0097 15.9 4.1 1.8 1 1 0 1 1 1 1 Winged helix-turn-helix Sigma70_r4_2 PF08281.12 gi|407464642|ref|YP_006775524.1| - 0.0054 16.4 0.0 0.011 15.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Dimerisation2 PF16864.5 gi|407464642|ref|YP_006775524.1| - 0.014 15.4 0.1 0.046 13.7 0.1 1.9 2 0 0 2 2 2 0 Dimerisation domain DnaB_C PF03796.15 gi|407464642|ref|YP_006775524.1| - 0.018 14.4 4.7 0.022 14.1 4.7 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain SPATA6 PF14909.6 gi|407464642|ref|YP_006775524.1| - 0.021 15.0 0.8 0.032 14.4 0.8 1.3 1 0 0 1 1 1 0 Spermatogenesis-assoc protein 6 HTH_9 PF08221.11 gi|407464642|ref|YP_006775524.1| - 0.021 14.9 0.1 0.06 13.5 0.1 1.8 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Sigma70_r4 PF04545.16 gi|407464642|ref|YP_006775524.1| - 0.021 14.3 0.0 0.044 13.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 DUF2250 PF10007.9 gi|407464642|ref|YP_006775524.1| - 0.027 14.6 1.4 0.052 13.7 1.4 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_11 PF08279.12 gi|407464642|ref|YP_006775524.1| - 0.046 13.7 0.2 0.12 12.4 0.2 1.6 1 0 0 1 1 1 0 HTH domain TrmB PF01978.19 gi|407464642|ref|YP_006775524.1| - 0.055 13.4 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|407464642|ref|YP_006775524.1| - 0.12 12.3 0.0 0.3 11.0 0.0 1.6 2 0 0 2 2 2 0 MarR family Rrf2 PF02082.20 gi|407464642|ref|YP_006775524.1| - 0.15 12.4 0.9 0.36 11.2 0.2 2.0 2 0 0 2 2 1 0 Transcriptional regulator PIG-H PF10181.9 gi|407464644|ref|YP_006775526.1| - 0.11 12.3 0.2 0.21 11.4 0.2 1.5 1 0 0 1 1 1 0 GPI-GlcNAc transferase complex, PIG-H component Transport_MerF PF11431.8 gi|407464645|ref|YP_006775527.1| - 0.84 9.6 7.0 16 5.5 1.8 3.0 2 1 0 2 2 2 0 Membrane transport protein MerF PIRT PF15099.6 gi|407464646|ref|YP_006775528.1| - 0.14 11.8 0.4 0.21 11.2 0.1 1.5 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family HTH_20 PF12840.7 gi|407464648|ref|YP_006775530.1| - 0.0014 18.6 0.0 0.0021 18.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|407464648|ref|YP_006775530.1| - 0.017 15.0 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Med29 PF11568.8 gi|407464648|ref|YP_006775530.1| - 0.034 14.4 0.2 0.096 12.9 0.1 1.8 1 1 1 2 2 2 0 Mediator complex subunit 29 BRCA2 PF00634.18 gi|407464648|ref|YP_006775530.1| - 0.063 13.0 1.4 0.21 11.3 0.8 2.1 2 0 0 2 2 2 0 BRCA2 repeat HTH_24 PF13412.6 gi|407464648|ref|YP_006775530.1| - 0.14 11.7 0.0 0.32 10.6 0.0 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding PSD3 PF07626.11 gi|407464648|ref|YP_006775530.1| - 0.19 12.3 0.0 0.36 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1587) Glycos_transf_2 PF00535.26 gi|407464650|ref|YP_006775532.1| - 3.8e-30 104.9 0.0 7.2e-30 104.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 GtrA PF04138.14 gi|407464650|ref|YP_006775532.1| - 4.9e-22 78.4 13.4 2.1e-21 76.3 14.0 1.8 1 1 0 1 1 1 1 GtrA-like protein Glyco_tranf_2_3 PF13641.6 gi|407464650|ref|YP_006775532.1| - 2.3e-11 44.0 0.0 3.5e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|407464650|ref|YP_006775532.1| - 0.02 14.4 0.0 0.051 13.1 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 21 PMT_2 PF13231.6 gi|407464651|ref|YP_006775533.1| - 4e-16 59.6 12.7 4e-16 59.6 12.7 3.0 3 1 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Tom7 PF08038.12 gi|407464651|ref|YP_006775533.1| - 0.35 10.6 7.5 2.8 7.7 0.1 3.5 3 0 0 3 3 3 0 TOM7 family TIMP PF00965.17 gi|407464653|ref|YP_006775535.1| - 2.2e-06 27.6 0.0 2.8e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Tissue inhibitor of metalloproteinase NtA PF03146.15 gi|407464653|ref|YP_006775535.1| - 1.7e-05 24.6 0.0 2.5e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Agrin NtA domain Sugarporin_N PF11471.8 gi|407464653|ref|YP_006775535.1| - 0.0056 16.6 0.0 0.0096 15.9 0.0 1.3 1 0 0 1 1 1 1 Maltoporin periplasmic N-terminal extension HTH_5 PF01022.20 gi|407464656|ref|YP_006775538.1| - 5.3e-07 29.4 0.4 2.1e-06 27.5 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|407464656|ref|YP_006775538.1| - 1.6e-06 27.6 0.1 2.8e-06 26.8 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Trypan_PARP PF05887.11 gi|407464656|ref|YP_006775538.1| - 3.4e-05 23.8 1.9 6.2e-05 23.0 1.9 1.4 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) HTH_20 PF12840.7 gi|407464656|ref|YP_006775538.1| - 4.4e-05 23.4 0.0 7.2e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|407464656|ref|YP_006775538.1| - 0.014 15.3 0.0 0.026 14.4 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 gi|407464656|ref|YP_006775538.1| - 0.025 14.5 0.1 0.055 13.4 0.1 1.5 1 0 0 1 1 1 0 HTH domain Rrf2 PF02082.20 gi|407464656|ref|YP_006775538.1| - 0.038 14.4 0.2 0.084 13.2 0.2 1.5 1 0 0 1 1 1 0 Transcriptional regulator TFIIE_alpha PF02002.17 gi|407464656|ref|YP_006775538.1| - 0.087 12.7 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit zf-Dof PF02701.15 gi|407464659|ref|YP_006775541.1| - 0.5 10.5 2.4 0.98 9.6 2.4 1.5 1 0 0 1 1 1 0 Dof domain, zinc finger DUF4367 PF14285.6 gi|407464660|ref|YP_006775542.1| - 0.0078 16.6 2.5 1.5 9.3 0.4 3.7 2 1 0 2 2 2 1 Domain of unknown function (DUF4367) CDRT4 PF15213.6 gi|407464660|ref|YP_006775542.1| - 0.085 13.5 0.0 0.36 11.4 0.0 2.0 2 0 0 2 2 2 0 CMT1A duplicated region transcript 4 protein Cupredoxin_1 PF13473.6 gi|407464661|ref|YP_006775543.1| - 0.00035 20.6 0.0 0.00069 19.7 0.0 1.5 1 0 0 1 1 1 1 Cupredoxin-like domain PepSY PF03413.19 gi|407464663|ref|YP_006775545.1| - 0.00016 22.1 1.5 0.00052 20.5 0.4 2.6 3 0 0 3 3 3 1 Peptidase propeptide and YPEB domain Cupredoxin_1 PF13473.6 gi|407464665|ref|YP_006775547.1| - 0.084 13.0 0.2 0.59 10.3 0.1 2.2 2 0 0 2 2 2 0 Cupredoxin-like domain ABM PF03992.16 gi|407464666|ref|YP_006775548.1| - 7.2e-07 29.2 0.2 2.2e-06 27.7 0.2 1.8 2 0 0 2 2 2 1 Antibiotic biosynthesis monooxygenase DUF1694 PF07997.11 gi|407464667|ref|YP_006775549.1| - 0.013 15.6 0.3 0.015 15.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1694) Exo_endo_phos_2 PF14529.6 gi|407464667|ref|YP_006775549.1| - 0.022 14.6 0.2 0.032 14.1 0.2 1.2 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase DnaJ PF00226.31 gi|407464669|ref|YP_006775551.1| - 3.6e-21 75.1 1.9 3.6e-21 75.1 1.9 2.0 2 0 0 2 2 2 1 DnaJ domain DUF5472 PF17566.2 gi|407464669|ref|YP_006775551.1| - 0.1 12.6 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5472) MmgE_PrpD PF03972.14 gi|407464669|ref|YP_006775551.1| - 0.41 9.1 0.8 0.49 8.9 0.8 1.1 1 0 0 1 1 1 0 MmgE/PrpD family HTH_AsnC-type PF13404.6 gi|407464670|ref|YP_006775552.1| - 3.1e-13 49.3 0.6 5.4e-13 48.5 0.6 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|407464670|ref|YP_006775552.1| - 5.5e-12 45.0 2.5 1.1e-11 44.0 1.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|407464670|ref|YP_006775552.1| - 2.6e-11 43.3 0.1 4.7e-11 42.5 0.1 1.5 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_50 PF18024.1 gi|407464670|ref|YP_006775552.1| - 4.4e-05 23.0 0.2 0.0002 20.9 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|407464670|ref|YP_006775552.1| - 0.00022 21.1 1.5 0.00031 20.6 0.7 1.7 2 0 0 2 2 2 1 HTH domain HTH_Crp_2 PF13545.6 gi|407464670|ref|YP_006775552.1| - 0.0026 17.7 0.2 0.0061 16.5 0.2 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HxlR PF01638.17 gi|407464670|ref|YP_006775552.1| - 0.0027 17.5 0.2 0.0046 16.8 0.2 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_20 PF12840.7 gi|407464670|ref|YP_006775552.1| - 0.008 16.2 0.1 0.012 15.6 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 gi|407464670|ref|YP_006775552.1| - 0.008 16.1 0.3 0.015 15.2 0.3 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|407464670|ref|YP_006775552.1| - 0.033 14.1 0.2 0.059 13.3 0.2 1.4 1 0 0 1 1 1 0 MarR family HTH_36 PF13730.6 gi|407464670|ref|YP_006775552.1| - 0.044 13.7 0.6 0.095 12.7 0.6 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|407464670|ref|YP_006775552.1| - 0.058 13.2 0.6 1.9 8.4 0.2 2.4 1 1 1 2 2 2 0 Homeodomain-like domain Mga PF05043.13 gi|407464670|ref|YP_006775552.1| - 0.093 13.3 0.6 0.32 11.6 0.6 2.0 1 1 0 1 1 1 0 Mga helix-turn-helix domain FaeA PF04703.12 gi|407464670|ref|YP_006775552.1| - 0.13 12.7 0.2 0.24 11.8 0.2 1.4 1 0 0 1 1 1 0 FaeA-like protein TPR_1 PF00515.28 gi|407464671|ref|YP_006775553.1| - 7.1e-17 60.4 0.0 2e-09 36.9 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407464671|ref|YP_006775553.1| - 8.1e-16 56.8 0.0 8.9e-08 31.7 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407464671|ref|YP_006775553.1| - 6.5e-12 44.7 0.0 2.1e-07 30.6 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|407464671|ref|YP_006775553.1| - 1.4e-09 37.4 0.0 5.3e-05 22.8 0.0 2.1 1 1 1 2 2 2 2 TPR repeat TPR_19 PF14559.6 gi|407464671|ref|YP_006775553.1| - 4.6e-09 36.7 0.0 5.2e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 gi|407464671|ref|YP_006775553.1| - 8.2e-08 32.1 0.7 1.8e-05 24.8 0.1 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|407464671|ref|YP_006775553.1| - 1.1e-07 31.3 0.0 0.0036 17.2 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|407464671|ref|YP_006775553.1| - 2.2e-07 30.9 0.0 2.4e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407464671|ref|YP_006775553.1| - 1.7e-06 28.4 0.0 0.014 16.2 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|407464671|ref|YP_006775553.1| - 1.9e-06 28.4 0.0 2.2e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407464671|ref|YP_006775553.1| - 2.1e-06 27.9 0.0 1.7e-05 25.0 0.0 1.9 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 gi|407464671|ref|YP_006775553.1| - 0.00013 21.7 0.0 0.46 10.4 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat DUF3856 PF12968.7 gi|407464671|ref|YP_006775553.1| - 0.0067 16.5 0.0 0.032 14.3 0.0 1.7 1 1 1 2 2 2 1 Domain of Unknown Function (DUF3856) ANAPC3 PF12895.7 gi|407464671|ref|YP_006775553.1| - 0.012 15.8 0.0 0.019 15.1 0.0 1.4 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 gi|407464671|ref|YP_006775553.1| - 0.032 14.3 0.0 0.13 12.4 0.0 1.9 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 gi|407464671|ref|YP_006775553.1| - 0.046 14.2 0.0 0.052 14.0 0.0 1.0 1 0 0 1 1 1 0 Alkyl sulfatase dimerisation TPR_1 PF00515.28 gi|407464672|ref|YP_006775554.1| - 5e-25 86.3 14.3 8e-07 28.6 2.1 4.2 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407464672|ref|YP_006775554.1| - 3.9e-22 76.5 10.1 4.9e-05 23.1 0.2 4.2 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|407464672|ref|YP_006775554.1| - 7e-20 70.4 11.3 1.6e-07 30.9 0.3 4.2 1 1 3 4 4 4 4 TPR repeat TPR_16 PF13432.6 gi|407464672|ref|YP_006775554.1| - 2.7e-16 59.9 0.3 2.6e-06 28.0 0.0 2.8 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407464672|ref|YP_006775554.1| - 4.1e-16 57.8 13.3 5.2e-05 23.1 0.0 4.5 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407464672|ref|YP_006775554.1| - 4e-13 49.4 12.3 3.5e-06 27.2 0.8 3.9 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407464672|ref|YP_006775554.1| - 4.7e-13 48.8 0.5 0.015 16.0 0.0 4.2 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407464672|ref|YP_006775554.1| - 2.4e-11 44.0 9.6 0.001 19.5 0.2 3.5 2 2 1 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|407464672|ref|YP_006775554.1| - 1.3e-10 40.5 2.9 0.18 11.9 0.0 4.3 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|407464672|ref|YP_006775554.1| - 4.8e-09 36.2 0.0 0.00074 19.6 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 gi|407464672|ref|YP_006775554.1| - 1.4e-08 34.6 6.9 0.0041 17.4 0.2 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|407464672|ref|YP_006775554.1| - 8.7e-08 32.3 14.5 0.00012 22.2 4.9 2.3 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 gi|407464672|ref|YP_006775554.1| - 4.1e-06 26.5 0.5 0.96 9.4 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_3 PF07720.12 gi|407464672|ref|YP_006775554.1| - 9.2e-06 25.5 8.0 0.16 12.0 0.6 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat MIT PF04212.18 gi|407464672|ref|YP_006775554.1| - 9.3e-06 25.6 9.6 0.6 10.2 0.1 4.4 4 1 0 4 4 4 2 MIT (microtubule interacting and transport) domain Fis1_TPR_C PF14853.6 gi|407464672|ref|YP_006775554.1| - 0.00014 21.9 7.9 0.039 14.0 0.0 4.0 4 1 0 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat DUF627 PF04781.12 gi|407464672|ref|YP_006775554.1| - 0.0002 21.3 1.6 0.027 14.5 0.5 2.6 1 1 0 2 2 2 1 Protein of unknown function (DUF627) TPR_6 PF13174.6 gi|407464672|ref|YP_006775554.1| - 0.0021 18.6 6.7 38 5.2 0.1 4.4 5 0 0 5 5 4 0 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|407464672|ref|YP_006775554.1| - 0.0043 16.5 1.6 12 5.5 0.1 4.1 4 0 0 4 4 4 0 SHNi-TPR CODH_A_N PF18537.1 gi|407464672|ref|YP_006775554.1| - 0.034 14.1 0.5 2.8 8.0 0.1 2.3 2 0 0 2 2 2 0 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Toprim_C_rpt PF13368.6 gi|407464672|ref|YP_006775554.1| - 0.046 13.7 0.7 0.45 10.5 0.1 2.4 3 0 0 3 3 2 0 Topoisomerase C-terminal repeat TPR_MalT PF17874.1 gi|407464672|ref|YP_006775554.1| - 0.047 13.1 0.1 1.4 8.2 0.0 2.5 1 1 2 3 3 3 0 MalT-like TPR region SRP_TPR_like PF17004.5 gi|407464672|ref|YP_006775554.1| - 0.068 13.2 3.9 0.17 11.9 2.0 2.3 1 1 1 2 2 2 0 Putative TPR-like repeat TPR_20 PF14561.6 gi|407464672|ref|YP_006775554.1| - 0.41 11.0 4.1 0.7 10.3 0.3 2.7 2 2 1 3 3 3 0 Tetratricopeptide repeat NSF PF02071.20 gi|407464672|ref|YP_006775554.1| - 3.4 8.8 5.4 2.9e+02 3.1 0.2 4.4 4 0 0 4 4 3 0 Aromatic-di-Alanine (AdAR) repeat zf-C2H2_jaz PF12171.8 gi|407464673|ref|YP_006775555.1| - 0.00011 22.3 0.8 0.00018 21.7 0.8 1.4 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 gi|407464673|ref|YP_006775555.1| - 0.0045 17.4 0.7 0.0061 16.9 0.7 1.2 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_2 PF12756.7 gi|407464673|ref|YP_006775555.1| - 0.0045 17.3 0.4 0.0049 17.2 0.4 1.1 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) Rad50_zn_hook PF04423.14 gi|407464673|ref|YP_006775555.1| - 0.0064 16.3 1.4 0.01 15.7 1.4 1.4 1 1 0 1 1 1 1 Rad50 zinc hook motif zf-C2H2_4 PF13894.6 gi|407464673|ref|YP_006775555.1| - 0.007 17.1 0.5 0.01 16.6 0.5 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger OTT_1508_deam PF14441.6 gi|407464673|ref|YP_006775555.1| - 0.011 15.7 0.1 0.014 15.4 0.1 1.2 1 0 0 1 1 1 0 OTT_1508-like deaminase zf-C2H2_6 PF13912.6 gi|407464673|ref|YP_006775555.1| - 0.016 15.2 1.5 0.024 14.6 1.5 1.3 1 0 0 1 1 1 0 C2H2-type zinc finger Radical_SAM PF04055.21 gi|407464674|ref|YP_006775556.1| - 1.9e-16 60.9 0.0 3.1e-16 60.2 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily BKACE PF05853.12 gi|407464674|ref|YP_006775556.1| - 0.088 12.1 0.0 10 5.4 0.0 2.2 2 0 0 2 2 2 0 beta-keto acid cleavage enzyme Thiamine_BP PF01910.17 gi|407464675|ref|YP_006775557.1| - 1.7e-25 88.7 1.7 1.9e-25 88.6 1.7 1.0 1 0 0 1 1 1 1 Thiamine-binding protein TMEM51 PF15345.6 gi|407464676|ref|YP_006775558.1| - 0.002 18.0 0.0 0.0022 17.9 0.0 1.0 1 0 0 1 1 1 1 Transmembrane protein 51 Rnf-Nqr PF02508.14 gi|407464676|ref|YP_006775558.1| - 0.04 13.9 0.4 0.055 13.4 0.1 1.4 2 0 0 2 2 2 0 Rnf-Nqr subunit, membrane protein Gram_pos_anchor PF00746.21 gi|407464676|ref|YP_006775558.1| - 0.11 12.4 0.0 0.11 12.4 0.0 2.7 3 0 0 3 3 3 0 LPXTG cell wall anchor motif Tetraspanin PF00335.20 gi|407464676|ref|YP_006775558.1| - 0.22 11.2 0.1 0.28 10.9 0.1 1.1 1 0 0 1 1 1 0 Tetraspanin family Tad PF13400.6 gi|407464677|ref|YP_006775559.1| - 0.02 15.2 0.0 0.02 15.2 0.0 2.3 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like ABC_tran_CTD PF16326.5 gi|407464678|ref|YP_006775560.1| - 0.005 17.1 8.3 0.0062 16.8 8.3 1.1 1 0 0 1 1 1 1 ABC transporter C-terminal domain SbsC_C PF18058.1 gi|407464678|ref|YP_006775560.1| - 0.021 15.1 0.7 0.024 14.9 0.7 1.1 1 0 0 1 1 1 0 SbsC C-terminal domain Spectrin PF00435.21 gi|407464678|ref|YP_006775560.1| - 0.06 13.8 4.4 0.13 12.7 2.9 1.8 1 1 1 2 2 2 0 Spectrin repeat PI3K_P85_iSH2 PF16454.5 gi|407464678|ref|YP_006775560.1| - 0.068 12.8 9.3 0.08 12.5 9.3 1.0 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4748 PF15932.5 gi|407464678|ref|YP_006775560.1| - 0.48 10.2 2.4 0.75 9.6 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4748) Fmp27_WPPW PF10359.9 gi|407464678|ref|YP_006775560.1| - 0.69 8.7 6.7 0.77 8.5 6.7 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain zf-ACC PF17848.1 gi|407464678|ref|YP_006775560.1| - 2.3 8.4 3.7 5.2 7.2 0.1 2.6 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain VitK2_biosynth PF02621.14 gi|407464680|ref|YP_006775562.1| - 2.8e-79 266.4 0.0 3.2e-79 266.2 0.0 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis SIS PF01380.22 gi|407464681|ref|YP_006775563.1| - 6.3e-09 35.8 2.6 0.00013 21.8 0.1 2.7 2 1 0 2 2 2 2 SIS domain GTP_EFTU PF00009.27 gi|407464682|ref|YP_006775564.1| - 8.5e-61 204.9 0.6 1.3e-60 204.3 0.6 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 gi|407464682|ref|YP_006775564.1| - 2.5e-20 72.3 0.0 8.9e-20 70.5 0.0 2.0 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_II PF14492.6 gi|407464682|ref|YP_006775564.1| - 3e-20 72.1 0.4 6.8e-20 70.9 0.4 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_IV PF03764.18 gi|407464682|ref|YP_006775564.1| - 8.3e-19 67.6 0.0 4e-18 65.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV GTP_EFTU_D2 PF03144.25 gi|407464682|ref|YP_006775564.1| - 6.6e-12 45.6 0.0 2e-11 44.1 0.0 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 Septin PF00735.18 gi|407464682|ref|YP_006775564.1| - 0.0026 17.1 0.1 0.0041 16.4 0.1 1.2 1 0 0 1 1 1 1 Septin MMR_HSR1 PF01926.23 gi|407464682|ref|YP_006775564.1| - 0.0067 16.5 0.0 0.015 15.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 gi|407464682|ref|YP_006775564.1| - 0.04 13.8 0.0 0.09 12.6 0.0 1.5 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain Shisa PF13908.6 gi|407464683|ref|YP_006775565.1| - 0.18 12.0 0.1 0.28 11.4 0.1 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DNA_pol_B_2 PF03175.13 gi|407464684|ref|YP_006775566.1| - 2e-27 96.2 24.4 2e-25 89.6 24.4 2.1 1 1 0 1 1 1 1 DNA polymerase type B, organellar and viral Vasohibin PF14822.6 gi|407464685|ref|YP_006775567.1| - 0.0081 15.4 1.2 0.0095 15.2 1.2 1.1 1 0 0 1 1 1 1 Vasohibin SPACA9 PF15120.6 gi|407464685|ref|YP_006775567.1| - 0.012 15.4 0.1 0.013 15.3 0.1 1.1 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 APC_N_CC PF16689.5 gi|407464685|ref|YP_006775567.1| - 0.039 14.0 1.5 0.054 13.6 0.5 1.7 2 0 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain Baculo_p74_N PF08404.10 gi|407464685|ref|YP_006775567.1| - 0.36 9.9 2.0 2.9 6.9 2.0 1.9 1 1 0 1 1 1 0 Baculoviridae P74 N-terminal HEPN_RES_NTD1 PF18870.1 gi|407464686|ref|YP_006775568.1| - 0.0041 17.3 0.1 0.0051 17.0 0.1 1.1 1 0 0 1 1 1 1 HEPN/RES N-terminal domain 1 GP63 PF17471.2 gi|407464686|ref|YP_006775568.1| - 0.028 14.6 0.6 1.3 9.3 0.1 2.2 1 1 1 2 2 2 0 Gene product 63 DUF3427 PF11907.8 gi|407464688|ref|YP_006775570.1| - 0.0095 15.2 0.7 0.013 14.7 0.6 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF3427) FANCM-MHF_bd PF16783.5 gi|407464688|ref|YP_006775570.1| - 0.049 13.7 0.1 0.073 13.2 0.1 1.3 1 0 0 1 1 1 0 FANCM to MHF binding domain Zn-ribbon_8 PF09723.10 gi|407464689|ref|YP_006775571.1| - 0.021 14.9 1.6 0.038 14.1 1.6 1.3 1 0 0 1 1 1 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|407464689|ref|YP_006775571.1| - 0.07 12.7 1.3 0.49 9.9 0.0 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding PyrI_C PF02748.15 gi|407464689|ref|YP_006775571.1| - 0.1 12.5 9.2 0.25 11.3 0.9 2.3 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-ribbon_3 PF13248.6 gi|407464689|ref|YP_006775571.1| - 0.24 10.9 3.9 3.3 7.2 0.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain TP6A_N PF04406.14 gi|407464689|ref|YP_006775571.1| - 0.27 11.3 0.2 0.27 11.3 0.2 1.6 2 0 0 2 2 2 0 Type IIB DNA topoisomerase zf-C2HE PF16278.5 gi|407464689|ref|YP_006775571.1| - 0.33 11.4 3.4 1 9.9 0.3 2.2 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_6 PF13912.6 gi|407464689|ref|YP_006775571.1| - 0.39 10.8 0.4 0.39 10.8 0.4 3.0 3 1 0 3 3 3 0 C2H2-type zinc finger zf-CHCC PF10276.9 gi|407464689|ref|YP_006775571.1| - 1.2 9.2 6.8 10 6.3 1.1 2.3 2 0 0 2 2 2 0 Zinc-finger domain DUF4760 PF15956.5 gi|407464690|ref|YP_006775572.1| - 0.0012 19.0 0.6 0.0017 18.5 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4760) DUF4134 PF13572.6 gi|407464690|ref|YP_006775572.1| - 0.0049 17.1 0.1 0.01 16.1 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4134) DUF2162 PF09930.9 gi|407464690|ref|YP_006775572.1| - 0.026 13.9 1.1 0.026 13.9 1.1 1.6 2 0 0 2 2 2 0 Predicted transporter (DUF2162) Roughex PF06020.11 gi|407464690|ref|YP_006775572.1| - 0.077 12.1 0.0 0.095 11.8 0.0 1.1 1 0 0 1 1 1 0 Drosophila roughex protein Phage_holin_2_3 PF16080.5 gi|407464690|ref|YP_006775572.1| - 0.18 11.6 2.3 1.1 9.1 2.3 2.2 1 1 0 1 1 1 0 Bacteriophage holin family HP1 OppC_N PF12911.7 gi|407464690|ref|YP_006775572.1| - 0.47 10.5 2.0 15 5.7 0.2 2.6 2 1 1 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C SLC3A2_N PF16028.5 gi|407464691|ref|YP_006775573.1| - 0.023 14.2 0.1 0.023 14.2 0.1 1.7 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus Cas_Cas1 PF01867.16 gi|407464693|ref|YP_006775575.1| - 1.7e-43 148.8 0.1 4.1e-39 134.4 0.1 2.1 1 1 0 1 1 1 1 CRISPR associated protein Cas1 Tox-HNH-HHH PF15637.6 gi|407464693|ref|YP_006775575.1| - 0.056 13.6 2.0 1.8 8.8 0.1 2.4 2 0 0 2 2 2 0 HNH/Endo VII superfamily nuclease toxin with a HHH motif DUF1035 PF06281.12 gi|407464694|ref|YP_006775576.1| - 0.0062 16.5 1.1 0.01 15.8 0.3 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF1035) DUF4745 PF15923.5 gi|407464695|ref|YP_006775577.1| - 0.0017 18.3 1.8 0.0024 17.8 1.8 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4745) Phasin_2 PF09361.10 gi|407464695|ref|YP_006775577.1| - 0.013 15.8 6.9 0.22 11.8 2.3 2.4 1 1 0 2 2 2 0 Phasin protein Pox_A12 PF04651.13 gi|407464695|ref|YP_006775577.1| - 0.036 14.1 5.9 0.27 11.3 3.4 2.1 1 1 1 2 2 2 0 Poxvirus A12 protein PMEI PF04043.15 gi|407464695|ref|YP_006775577.1| - 0.074 13.4 2.4 0.3 11.4 2.4 1.8 1 1 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor Penicillinase_R PF03965.16 gi|407464696|ref|YP_006775578.1| - 0.00055 20.3 0.3 0.00094 19.5 0.3 1.4 1 0 0 1 1 1 1 Penicillinase repressor RGS PF00615.19 gi|407464696|ref|YP_006775578.1| - 0.057 13.7 1.2 0.18 12.1 0.6 2.0 1 1 1 2 2 2 0 Regulator of G protein signaling domain Glycoprot_B_PH2 PF17417.2 gi|407464697|ref|YP_006775579.1| - 0.0002 21.6 0.0 0.00025 21.3 0.0 1.0 1 0 0 1 1 1 1 Herpesvirus Glycoprotein B PH-like domain DUF2666 PF10869.8 gi|407464698|ref|YP_006775580.1| - 0.035 14.3 1.7 0.18 12.0 1.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2666) CNOT11 PF10155.9 gi|407464698|ref|YP_006775580.1| - 0.11 12.6 0.1 0.17 12.0 0.1 1.3 1 1 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 Syntaxin_2 PF14523.6 gi|407464699|ref|YP_006775581.1| - 0.0076 16.6 0.6 0.015 15.7 0.6 1.5 1 0 0 1 1 1 1 Syntaxin-like protein Uteroglobin PF01099.17 gi|407464699|ref|YP_006775581.1| - 0.008 16.5 0.2 0.024 14.9 0.0 1.8 2 1 0 2 2 2 1 Uteroglobin family Rh5 PF18515.1 gi|407464699|ref|YP_006775581.1| - 0.012 14.9 0.3 0.014 14.7 0.3 1.1 1 0 0 1 1 1 0 Rh5 coiled-coil domain P53_tetramer PF07710.11 gi|407464699|ref|YP_006775581.1| - 0.044 13.1 0.2 8.1 5.9 0.0 2.9 2 0 0 2 2 2 0 P53 tetramerisation motif Rx_N PF18052.1 gi|407464699|ref|YP_006775581.1| - 0.05 13.9 1.1 1.3 9.4 0.3 2.3 1 1 1 2 2 2 0 Rx N-terminal domain RPA_interact_C PF14768.6 gi|407464700|ref|YP_006775582.1| - 0.019 15.5 0.7 4 8.1 0.1 2.1 2 0 0 2 2 2 0 Replication protein A interacting C-terminal Ycf66_N PF07444.11 gi|407464701|ref|YP_006775583.1| - 0.072 13.2 0.7 1.6 8.9 0.0 2.3 2 1 0 2 2 2 0 Ycf66 protein N-terminus DUF4405 PF14358.6 gi|407464701|ref|YP_006775583.1| - 0.22 12.1 5.8 0.35 11.5 4.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4405) Copper-bind PF00127.20 gi|407464702|ref|YP_006775584.1| - 3.8e-05 24.1 0.0 7.9e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Methyltransf_3 PF01596.17 gi|407464704|ref|YP_006775586.1| - 7e-34 116.9 1.6 1.4e-32 112.6 1.6 2.0 1 1 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 gi|407464704|ref|YP_006775586.1| - 3.9e-15 56.8 0.0 5.7e-15 56.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|407464704|ref|YP_006775586.1| - 1.4e-06 28.1 0.0 2e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|407464704|ref|YP_006775586.1| - 2.7e-06 27.3 0.0 4.3e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CmcI PF04989.12 gi|407464704|ref|YP_006775586.1| - 0.00018 21.3 0.0 0.00024 20.9 0.0 1.2 1 0 0 1 1 1 1 Cephalosporin hydroxylase Methyltransf_15 PF09445.10 gi|407464704|ref|YP_006775586.1| - 0.0028 17.2 0.1 0.0038 16.8 0.1 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase GCD14 PF08704.10 gi|407464704|ref|YP_006775586.1| - 0.0057 16.4 0.0 0.0078 15.9 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit hSac2 PF12456.8 gi|407464704|ref|YP_006775586.1| - 0.0078 15.9 0.6 1.7 8.4 0.1 2.6 2 1 1 3 3 3 2 Inositol phosphatase Cons_hypoth95 PF03602.15 gi|407464704|ref|YP_006775586.1| - 0.0087 15.7 0.2 0.025 14.2 0.0 1.7 2 0 0 2 2 2 1 Conserved hypothetical protein 95 DUF1442 PF07279.11 gi|407464704|ref|YP_006775586.1| - 0.011 15.1 0.0 0.015 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1442) Methyltr_RsmB-F PF01189.17 gi|407464704|ref|YP_006775586.1| - 0.019 14.6 0.0 0.032 13.9 0.0 1.4 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_25 PF13649.6 gi|407464704|ref|YP_006775586.1| - 0.023 15.4 0.0 0.039 14.7 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Met_10 PF02475.16 gi|407464704|ref|YP_006775586.1| - 0.042 13.6 0.1 0.058 13.1 0.1 1.4 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_18 PF12847.7 gi|407464704|ref|YP_006775586.1| - 0.049 13.5 0.0 0.084 12.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 gi|407464704|ref|YP_006775586.1| - 0.058 13.1 0.0 0.2 11.3 0.0 1.9 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 TrkA_N PF02254.18 gi|407464704|ref|YP_006775586.1| - 0.065 13.5 0.6 0.27 11.5 0.7 1.9 1 1 0 1 1 1 0 TrkA-N domain RE_BsaWI PF18643.1 gi|407464705|ref|YP_006775587.1| - 0.028 14.3 0.8 0.042 13.8 0.8 1.5 1 1 0 1 1 1 0 BsaWI restriction endonuclease type 2 BBS1 PF14779.6 gi|407464705|ref|YP_006775587.1| - 0.06 12.8 0.4 0.061 12.8 0.4 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 1 Sulphotransf PF09037.10 gi|407464705|ref|YP_006775587.1| - 0.087 12.3 0.0 0.098 12.2 0.0 1.2 1 0 0 1 1 1 0 Stf0 sulphotransferase Herpes_UL69 PF05459.12 gi|407464706|ref|YP_006775588.1| - 0.012 14.9 0.0 0.017 14.5 0.0 1.4 1 0 0 1 1 1 0 Herpesvirus transcriptional regulator family MetOD2 PF18548.1 gi|407464708|ref|YP_006775590.1| - 0.028 14.5 1.9 0.035 14.2 1.9 1.2 1 0 0 1 1 1 0 Metanogen output domain 2 DUF4140 PF13600.6 gi|407464708|ref|YP_006775590.1| - 0.086 13.3 0.1 0.11 13.0 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Tetraspanin PF00335.20 gi|407464709|ref|YP_006775591.1| - 0.081 12.6 0.1 0.1 12.3 0.1 1.1 1 0 0 1 1 1 0 Tetraspanin family Phage_holin_3_6 PF07332.11 gi|407464709|ref|YP_006775591.1| - 0.081 13.0 0.2 0.13 12.3 0.2 1.3 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2105 PF09878.9 gi|407464709|ref|YP_006775591.1| - 0.15 11.8 1.2 0.19 11.5 1.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2105) CrgA PF06781.12 gi|407464709|ref|YP_006775591.1| - 5 7.2 6.2 26 4.9 6.2 1.9 1 1 0 1 1 1 0 Cell division protein CrgA SpoIISA_toxin PF14171.6 gi|407464710|ref|YP_006775592.1| - 0.22 11.2 0.0 0.28 10.8 0.0 1.1 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system DUF5615 PF18480.1 gi|407464711|ref|YP_006775593.1| - 2.2e-14 53.0 0.2 5.6e-14 51.7 0.1 1.6 1 1 1 2 2 2 1 Domain of unknown function (DUF5615) PIN_10 PF18478.1 gi|407464711|ref|YP_006775593.1| - 9.7e-07 28.9 0.0 1.4e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 PIN like domain Mut7-C PF01927.16 gi|407464711|ref|YP_006775593.1| - 3.8e-06 27.1 0.1 3.9e-06 27.0 0.1 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain PIN_9 PF18477.1 gi|407464711|ref|YP_006775593.1| - 0.0015 18.8 0.0 0.0017 18.6 0.0 1.2 1 0 0 1 1 1 1 PIN like domain DUF4411 PF14367.6 gi|407464711|ref|YP_006775593.1| - 0.034 14.1 0.0 0.037 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4411) UPF0180 PF03698.13 gi|407464711|ref|YP_006775593.1| - 0.042 14.0 0.1 0.056 13.6 0.1 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0180) DUF562 PF04763.12 gi|407464711|ref|YP_006775593.1| - 0.045 13.2 0.0 0.054 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF562) PIN PF01850.21 gi|407464711|ref|YP_006775593.1| - 0.051 14.1 0.0 0.078 13.5 0.0 1.3 1 0 0 1 1 1 0 PIN domain RNase_Zc3h12a PF11977.8 gi|407464711|ref|YP_006775593.1| - 0.057 13.2 0.0 0.064 13.0 0.0 1.2 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain HxlR PF01638.17 gi|407464712|ref|YP_006775594.1| - 0.0089 15.9 0.6 0.034 14.0 0.3 1.9 2 0 0 2 2 2 1 HxlR-like helix-turn-helix Sec34 PF04136.15 gi|407464712|ref|YP_006775594.1| - 0.023 14.6 4.9 0.038 13.9 4.9 1.3 1 0 0 1 1 1 0 Sec34-like family DAAD PF18752.1 gi|407464712|ref|YP_006775594.1| - 0.036 13.9 0.6 0.043 13.7 0.6 1.1 1 0 0 1 1 1 0 Dictyosteliid AID/APOBEC-like Deaminase Fis1_TPR_N PF14852.6 gi|407464713|ref|YP_006775595.1| - 0.083 12.6 0.2 0.13 12.0 0.2 1.4 1 0 0 1 1 1 0 Fis1 N-terminal tetratricopeptide repeat TrkH PF02386.16 gi|407464716|ref|YP_006775598.1| - 2.5e-20 72.4 26.1 1.1e-15 57.1 5.6 2.7 1 1 1 2 2 2 2 Cation transport protein CBS PF00571.28 gi|407464716|ref|YP_006775598.1| - 4.7e-19 68.6 3.7 8.8e-10 38.9 0.1 2.5 2 0 0 2 2 2 2 CBS domain CAAD PF14159.6 gi|407464716|ref|YP_006775598.1| - 0.00011 22.0 0.8 0.019 14.8 0.0 3.6 3 0 0 3 3 3 1 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DNase-RNase PF02577.14 gi|407464717|ref|YP_006775599.1| - 4.8e-07 29.5 0.0 5.2e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 Bifunctional nuclease DUF4060 PF13269.6 gi|407464717|ref|YP_006775599.1| - 0.16 12.1 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4060) DUF1993 PF09351.10 gi|407464719|ref|YP_006775601.1| - 0.047 13.8 0.1 0.047 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) TMPIT PF07851.13 gi|407464719|ref|YP_006775601.1| - 0.054 12.7 0.3 0.059 12.6 0.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein Peptidase_Prp PF04327.12 gi|407464719|ref|YP_006775601.1| - 0.15 12.3 0.2 0.19 12.0 0.2 1.1 1 0 0 1 1 1 0 Cysteine protease Prp PKD PF00801.20 gi|407464720|ref|YP_006775602.1| - 0.0091 15.8 0.7 0.013 15.3 0.7 1.3 1 0 0 1 1 1 1 PKD domain DUF3444 PF11926.8 gi|407464720|ref|YP_006775602.1| - 0.025 14.2 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3444) DUF1510 PF07423.11 gi|407464720|ref|YP_006775602.1| - 0.039 14.1 0.1 0.073 13.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1510) zinc_ribbon_4 PF13717.6 gi|407464722|ref|YP_006775604.1| - 0.011 15.6 1.7 0.028 14.3 1.7 1.7 1 1 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|407464722|ref|YP_006775604.1| - 0.018 14.6 0.5 0.029 13.9 0.5 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding Lar_restr_allev PF14354.6 gi|407464722|ref|YP_006775604.1| - 0.049 14.0 0.0 0.062 13.7 0.0 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-FPG_IleRS PF06827.14 gi|407464722|ref|YP_006775604.1| - 0.086 12.7 1.6 2 8.3 0.4 2.4 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Gin PF10764.9 gi|407464722|ref|YP_006775604.1| - 0.19 11.7 3.7 1.4 8.9 0.1 2.3 2 0 0 2 2 2 0 Inhibitor of sigma-G Gin zf_UBZ PF18439.1 gi|407464722|ref|YP_006775604.1| - 0.41 10.3 2.3 3.4 7.3 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger DUF1297 PF06973.12 gi|407464723|ref|YP_006775605.1| - 5.1e-73 244.6 0.1 7.3e-73 244.1 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|407464723|ref|YP_006775605.1| - 1.6e-47 160.5 0.0 3.2e-47 159.5 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) Flavoprotein PF02441.19 gi|407464724|ref|YP_006775606.1| - 1.7e-29 102.6 0.2 2.1e-29 102.3 0.2 1.0 1 0 0 1 1 1 1 Flavoprotein Polyketide_cyc PF03364.20 gi|407464725|ref|YP_006775607.1| - 0.00032 20.9 0.0 0.00071 19.8 0.0 1.6 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 gi|407464725|ref|YP_006775607.1| - 0.039 14.2 0.0 0.075 13.3 0.0 1.7 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport MttA_Hcf106 PF02416.16 gi|407464726|ref|YP_006775608.1| - 2.8e-10 39.4 6.9 5.4e-10 38.4 6.9 1.5 1 1 0 1 1 1 1 mttA/Hcf106 family UPF0370 PF13980.6 gi|407464726|ref|YP_006775608.1| - 0.28 11.2 0.8 0.36 10.9 0.8 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0370) TatC PF00902.18 gi|407464727|ref|YP_006775609.1| - 1.5e-52 178.4 15.9 1.8e-52 178.2 15.9 1.0 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) Ribosomal_L12_N PF16320.5 gi|407464728|ref|YP_006775610.1| - 0.011 15.4 0.6 0.24 11.1 0.0 2.3 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain Ist1 PF03398.14 gi|407464728|ref|YP_006775610.1| - 0.048 13.6 0.0 0.066 13.1 0.0 1.3 1 0 0 1 1 1 0 Regulator of Vps4 activity in the MVB pathway PurS PF02700.14 gi|407464729|ref|YP_006775611.1| - 1.6e-19 69.8 0.4 1.8e-19 69.7 0.4 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GATase_5 PF13507.6 gi|407464730|ref|YP_006775612.1| - 3e-41 141.2 0.0 8.8e-41 139.7 0.0 1.7 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 gi|407464730|ref|YP_006775612.1| - 2.7e-09 36.9 0.0 8.3e-09 35.3 0.0 1.7 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|407464730|ref|YP_006775612.1| - 2.9e-09 37.0 0.0 5.7e-09 36.0 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|407464730|ref|YP_006775612.1| - 1.4e-06 28.3 0.0 2.2e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family Peptidase_C26 PF07722.13 gi|407464730|ref|YP_006775612.1| - 0.0026 17.5 0.2 0.0065 16.2 0.2 1.6 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.19 gi|407464730|ref|YP_006775612.1| - 0.018 14.9 0.0 0.096 12.5 0.0 1.9 2 0 0 2 2 2 0 SNO glutamine amidotransferase family AIRS_C PF02769.22 gi|407464731|ref|YP_006775613.1| - 2.2e-50 170.8 0.1 7.1e-29 100.9 0.4 2.2 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|407464731|ref|YP_006775613.1| - 2.2e-38 130.8 0.0 5.1e-19 68.7 0.1 2.7 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|407464731|ref|YP_006775613.1| - 1.4e-10 41.5 0.4 3.5e-10 40.3 0.4 1.7 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain Kinase-PolyVal PF18762.1 gi|407464731|ref|YP_006775613.1| - 0.033 14.1 0.2 0.06 13.3 0.2 1.4 1 0 0 1 1 1 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins GATase_6 PF13522.6 gi|407464733|ref|YP_006775615.1| - 1.2e-13 51.5 0.0 3.1e-13 50.1 0.0 1.6 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|407464733|ref|YP_006775615.1| - 1.8e-12 47.2 0.0 3.4e-12 46.4 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 gi|407464733|ref|YP_006775615.1| - 6.4e-10 38.8 0.0 1.2e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.6 gi|407464733|ref|YP_006775615.1| - 5.6e-05 22.2 0.0 9.7e-05 21.4 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_2 PF00310.21 gi|407464733|ref|YP_006775615.1| - 0.02 13.6 0.0 0.18 10.4 0.0 2.3 3 0 0 3 3 3 0 Glutamine amidotransferases class-II Dip PF17679.1 gi|407464733|ref|YP_006775615.1| - 0.1 12.1 0.1 0.28 10.7 0.0 1.6 2 0 0 2 2 2 0 gp37/Dip protein NTP_transf_9 PF04248.12 gi|407464734|ref|YP_006775616.1| - 5.6e-31 106.3 0.5 6.1e-31 106.2 0.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF427) DUF3509 PF12021.8 gi|407464735|ref|YP_006775617.1| - 0.019 14.7 0.0 0.021 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3509) GP24_25 PF17388.2 gi|407464735|ref|YP_006775617.1| - 0.023 14.7 2.3 0.025 14.5 2.3 1.1 1 0 0 1 1 1 0 Tail assembly gene products 24 & 25 Cob_adeno_trans PF01923.18 gi|407464735|ref|YP_006775617.1| - 0.047 13.8 0.7 0.048 13.8 0.7 1.0 1 0 0 1 1 1 0 Cobalamin adenosyltransferase DUF4407 PF14362.6 gi|407464735|ref|YP_006775617.1| - 0.2 11.0 1.0 0.22 10.8 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HATPase_c PF02518.26 gi|407464736|ref|YP_006775618.1| - 7.4e-19 68.3 0.3 1.9e-18 67.0 0.3 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|407464736|ref|YP_006775618.1| - 7.9e-13 48.2 0.3 4.3e-12 45.9 0.4 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 gi|407464736|ref|YP_006775618.1| - 1.7e-07 31.1 0.6 5e-07 29.6 0.2 2.1 2 0 0 2 2 2 1 GHKL domain HATPase_c_3 PF13589.6 gi|407464736|ref|YP_006775618.1| - 0.00034 20.5 0.3 0.0011 18.9 0.0 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PilJ PF13675.6 gi|407464736|ref|YP_006775618.1| - 0.02 14.9 0.0 0.4 10.7 0.0 2.3 2 1 0 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term GDPD PF03009.17 gi|407464736|ref|YP_006775618.1| - 0.48 10.1 3.3 0.52 10.0 0.4 2.1 1 1 1 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family DUF3139 PF11337.8 gi|407464736|ref|YP_006775618.1| - 7 7.4 10.1 13 6.5 0.5 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3139) SAICAR_synt PF01259.18 gi|407464737|ref|YP_006775619.1| - 2.9e-69 233.5 0.1 3.5e-69 233.2 0.1 1.0 1 0 0 1 1 1 1 SAICAR synthetase HTH_20 PF12840.7 gi|407464738|ref|YP_006775620.1| - 3.8e-08 33.3 0.1 8e-08 32.2 0.2 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|407464738|ref|YP_006775620.1| - 5.8e-06 26.1 0.4 4.7e-05 23.2 0.4 2.2 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_12 PF08461.10 gi|407464738|ref|YP_006775620.1| - 7.9e-05 22.5 0.2 0.00016 21.5 0.2 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain FUR PF01475.19 gi|407464738|ref|YP_006775620.1| - 0.0011 19.1 0.4 0.0021 18.2 0.4 1.7 1 1 0 1 1 1 1 Ferric uptake regulator family Replic_Relax PF13814.6 gi|407464738|ref|YP_006775620.1| - 0.0023 18.0 0.3 0.012 15.7 0.1 2.0 2 0 0 2 2 2 1 Replication-relaxation Type2_restr_D3 PF16902.5 gi|407464738|ref|YP_006775620.1| - 0.023 14.6 0.1 0.068 13.1 0.1 1.8 1 0 0 1 1 1 0 Type-2 restriction enzyme D3 domain Putative_PNPOx PF01243.20 gi|407464739|ref|YP_006775621.1| - 3.6e-14 52.7 0.0 4.6e-14 52.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|407464739|ref|YP_006775621.1| - 0.013 15.5 0.0 0.02 14.9 0.0 1.4 1 1 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase RcnB PF11776.8 gi|407464739|ref|YP_006775621.1| - 0.031 14.3 0.2 0.08 13.0 0.0 1.8 2 0 0 2 2 2 0 Nickel/cobalt transporter regulator DUF4352 PF11611.8 gi|407464741|ref|YP_006775623.1| - 9e-12 45.4 0.5 1.2e-11 45.0 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4352) tRNA_deacylase PF04414.12 gi|407464741|ref|YP_006775623.1| - 0.04 13.4 0.1 0.051 13.1 0.1 1.2 1 0 0 1 1 1 0 D-aminoacyl-tRNA deacylase DUF2299 PF10061.9 gi|407464744|ref|YP_006775626.1| - 1.4e-22 79.9 0.6 1.8e-22 79.6 0.6 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2299) Ldh_1_C PF02866.18 gi|407464744|ref|YP_006775626.1| - 0.048 13.6 0.2 0.41 10.6 0.0 1.9 1 1 1 2 2 2 0 lactate/malate dehydrogenase, alpha/beta C-terminal domain GP3_package PF16677.5 gi|407464744|ref|YP_006775626.1| - 0.065 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 DNA-packaging protein gp3 Crp PF00325.20 gi|407464744|ref|YP_006775626.1| - 0.15 11.7 0.0 0.41 10.3 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family Tmemb_170 PF10190.9 gi|407464745|ref|YP_006775627.1| - 0.049 14.0 0.1 0.06 13.7 0.1 1.1 1 0 0 1 1 1 0 Putative transmembrane protein 170 UPF0640 PF15114.6 gi|407464745|ref|YP_006775627.1| - 0.094 12.5 0.2 0.15 11.9 0.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0640 DUF4257 PF14074.6 gi|407464745|ref|YP_006775627.1| - 0.12 12.6 2.2 0.26 11.5 2.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4257) DZR PF12773.7 gi|407464746|ref|YP_006775628.1| - 0.00047 20.1 0.2 0.00061 19.8 0.2 1.2 1 0 0 1 1 1 1 Double zinc ribbon DNA_RNApol_7kD PF03604.13 gi|407464746|ref|YP_006775628.1| - 0.012 15.3 1.6 1.1 9.0 0.4 2.6 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit DUF35_N PF12172.8 gi|407464746|ref|YP_006775628.1| - 0.013 15.4 1.7 1.3 8.9 0.0 2.4 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.10 gi|407464746|ref|YP_006775628.1| - 0.021 15.0 0.1 0.87 9.8 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain C1_4 PF07975.12 gi|407464746|ref|YP_006775628.1| - 0.034 14.4 1.4 1.4 9.3 2.1 2.2 1 1 1 2 2 2 0 TFIIH C1-like domain zf-HYPF PF07503.12 gi|407464746|ref|YP_006775628.1| - 0.058 13.2 1.7 2.4 8.0 0.2 2.4 2 0 0 2 2 2 0 HypF finger zf-IS66 PF13005.7 gi|407464746|ref|YP_006775628.1| - 0.19 12.2 4.8 0.36 11.3 0.2 2.5 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 Zn_ribbon_SprT PF17283.2 gi|407464746|ref|YP_006775628.1| - 0.38 10.7 3.8 4.4 7.3 3.5 2.3 1 1 1 2 2 2 0 SprT-like zinc ribbon domain zf-LYAR PF08790.11 gi|407464746|ref|YP_006775628.1| - 0.4 10.6 2.4 17 5.4 0.1 2.2 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger Ribosomal_L6 PF00347.23 gi|407464748|ref|YP_006775630.1| - 5.8e-12 46.1 7.7 1.9e-07 31.7 0.6 2.2 2 0 0 2 2 2 2 Ribosomal protein L6 BON PF04972.17 gi|407464748|ref|YP_006775630.1| - 0.076 13.3 4.1 7.2 7.0 0.0 3.4 4 1 0 4 4 4 0 BON domain RL10P_insert PF17777.1 gi|407464748|ref|YP_006775630.1| - 0.076 13.0 0.3 1.4 9.0 0.1 2.3 1 1 1 2 2 2 0 Insertion domain in 60S ribosomal protein L10P Ribosomal_S8 PF00410.19 gi|407464749|ref|YP_006775631.1| - 1e-21 77.2 0.0 1.2e-21 76.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 gi|407464750|ref|YP_006775632.1| - 1.7e-08 34.1 3.3 2.3e-08 33.7 3.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-FPG_IleRS PF06827.14 gi|407464750|ref|YP_006775632.1| - 0.036 13.9 2.6 0.068 13.0 2.3 1.6 1 1 0 1 1 1 0 Zinc finger found in FPG and IleRS Ribosomal_L5_C PF00673.21 gi|407464751|ref|YP_006775633.1| - 6.7e-21 74.3 0.0 1.2e-20 73.4 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|407464751|ref|YP_006775633.1| - 8.8e-14 51.6 0.1 1.6e-13 50.7 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S4e PF00900.20 gi|407464752|ref|YP_006775634.1| - 2.8e-18 65.6 0.4 5.6e-18 64.6 0.4 1.5 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.12 gi|407464752|ref|YP_006775634.1| - 1.7e-12 47.2 0.7 2.8e-12 46.5 0.7 1.3 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 gi|407464752|ref|YP_006775634.1| - 6.5e-05 22.6 0.1 0.00015 21.4 0.1 1.7 1 0 0 1 1 1 1 S4 domain KOW PF00467.29 gi|407464752|ref|YP_006775634.1| - 0.036 14.0 0.5 0.12 12.3 0.1 2.1 2 0 0 2 2 2 0 KOW motif Ribosomal_L26 PF16906.5 gi|407464753|ref|YP_006775635.1| - 4.1e-17 62.4 0.5 7.5e-17 61.6 0.5 1.5 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|407464753|ref|YP_006775635.1| - 0.00045 20.1 1.3 0.00059 19.7 0.3 1.8 1 1 0 1 1 1 1 KOW motif Ribosomal_L14 PF00238.19 gi|407464754|ref|YP_006775636.1| - 2.4e-32 111.6 0.6 2.7e-32 111.4 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_S17 PF00366.20 gi|407464755|ref|YP_006775637.1| - 1e-16 60.8 0.1 1.3e-16 60.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|407464755|ref|YP_006775637.1| - 0.0015 18.8 0.0 0.0029 17.9 0.0 1.5 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal UPF0086 PF01868.16 gi|407464756|ref|YP_006775638.1| - 6e-21 74.2 0.1 6.6e-21 74.0 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Proteasom_PSMB PF10508.9 gi|407464756|ref|YP_006775638.1| - 0.22 10.0 0.0 0.25 9.8 0.0 1.0 1 0 0 1 1 1 0 Proteasome non-ATPase 26S subunit Ribosomal_L29 PF00831.23 gi|407464757|ref|YP_006775639.1| - 3.1e-11 43.1 4.3 4.1e-11 42.7 4.3 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein DUF1090 PF06476.12 gi|407464757|ref|YP_006775639.1| - 0.041 14.0 1.4 0.051 13.7 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) Ribosomal_S3_C PF00189.20 gi|407464758|ref|YP_006775640.1| - 7.8e-20 71.2 1.1 7.8e-20 71.2 1.1 2.3 3 0 0 3 3 3 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|407464758|ref|YP_006775640.1| - 3e-12 46.2 0.0 3e-12 46.2 0.0 2.4 2 1 0 2 2 2 1 KH domain KH_4 PF13083.6 gi|407464758|ref|YP_006775640.1| - 0.018 14.9 0.4 0.055 13.4 0.0 2.0 2 0 0 2 2 2 0 KH domain KH_1 PF00013.29 gi|407464758|ref|YP_006775640.1| - 0.024 14.5 2.0 1.9 8.4 0.0 3.1 3 0 0 3 3 3 0 KH domain Ribosomal_L22 PF00237.19 gi|407464759|ref|YP_006775641.1| - 1.6e-24 86.1 0.3 1.9e-24 85.9 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Herpes_UL36 PF03586.13 gi|407464759|ref|YP_006775641.1| - 0.13 11.5 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus UL36 tegument protein Ribosomal_S19 PF00203.21 gi|407464760|ref|YP_006775642.1| - 7.7e-27 93.0 0.2 9.6e-27 92.7 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S19 Ribosomal_L23 PF00276.20 gi|407464761|ref|YP_006775643.1| - 5.5e-14 52.3 6.0 1e-13 51.5 6.0 1.4 1 1 0 1 1 1 1 Ribosomal protein L23 NOP5NT PF08156.13 gi|407464761|ref|YP_006775643.1| - 0.0058 17.0 0.8 0.0081 16.5 0.7 1.4 1 1 0 1 1 1 1 NOP5NT (NUC127) domain Ribosomal_L4 PF00573.22 gi|407464762|ref|YP_006775644.1| - 1.3e-43 149.0 0.1 1.5e-43 148.8 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.22 gi|407464763|ref|YP_006775645.1| - 1.8e-67 227.9 3.2 8e-67 225.8 3.2 1.7 1 1 0 1 1 1 1 Ribosomal protein L3 Methyltrn_RNA_3 PF02598.17 gi|407464764|ref|YP_006775646.1| - 2e-53 181.8 0.0 2.2e-53 181.6 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methyltransferase SpoU_methylase PF00588.19 gi|407464764|ref|YP_006775646.1| - 0.0024 18.0 0.0 0.64 10.2 0.0 2.2 2 0 0 2 2 2 2 SpoU rRNA Methylase family Proteasome PF00227.26 gi|407464765|ref|YP_006775647.1| - 9.4e-55 185.0 0.2 1.2e-54 184.7 0.2 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|407464765|ref|YP_006775647.1| - 3.8e-14 52.0 0.7 1.4e-13 50.2 0.1 2.2 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature DUF371 PF04027.13 gi|407464766|ref|YP_006775648.1| - 8.4e-47 158.5 0.2 9.2e-47 158.3 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) Metallothio_Cad PF07846.11 gi|407464766|ref|YP_006775648.1| - 0.0024 17.9 0.5 0.0042 17.2 0.5 1.3 1 0 0 1 1 1 1 Metallothionein family GSDH PF07995.11 gi|407464767|ref|YP_006775649.1| - 1.2e-87 294.3 0.1 1.6e-87 293.9 0.1 1.1 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase SGL PF08450.12 gi|407464767|ref|YP_006775649.1| - 0.021 14.4 0.0 30 4.1 0.0 3.3 2 1 1 3 3 3 0 SMP-30/Gluconolactonase/LRE-like region DUF5122 PF17164.4 gi|407464767|ref|YP_006775649.1| - 0.21 11.9 3.1 5.8 7.3 0.3 4.3 4 1 0 4 4 4 0 Domain of unknown function (DUF5122) beta-propeller TPK_B1_binding PF04265.14 gi|407464768|ref|YP_006775650.1| - 0.03 14.0 0.1 0.12 12.1 0.0 2.0 3 0 0 3 3 3 0 Thiamin pyrophosphokinase, vitamin B1 binding domain WbqC PF08889.11 gi|407464768|ref|YP_006775650.1| - 0.076 12.9 0.9 0.11 12.4 0.8 1.3 1 1 0 1 1 1 0 WbqC-like protein family Snf7 PF03357.21 gi|407464769|ref|YP_006775651.1| - 1.5e-05 24.7 0.2 2.4e-05 24.0 0.2 1.3 1 0 0 1 1 1 1 Snf7 Thioredoxin_10 PF17991.1 gi|407464770|ref|YP_006775652.1| - 8.2e-33 113.9 0.0 1.2e-32 113.4 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin like C-terminal domain AhpC-TSA PF00578.21 gi|407464770|ref|YP_006775652.1| - 2.3e-08 34.0 0.1 1.1e-07 31.8 0.0 2.0 2 0 0 2 2 2 1 AhpC/TSA family Redoxin PF08534.10 gi|407464770|ref|YP_006775652.1| - 1e-06 28.5 0.0 1.8e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 gi|407464770|ref|YP_006775652.1| - 0.012 16.0 0.1 0.035 14.4 0.1 1.8 1 0 0 1 1 1 0 Thioredoxin-like DsbD PF02683.15 gi|407464771|ref|YP_006775653.1| - 1.4e-50 172.1 22.5 1.7e-50 171.9 22.5 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|407464771|ref|YP_006775653.1| - 3.1e-07 30.6 15.7 4.3e-07 30.1 15.7 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region SfLAP PF11139.8 gi|407464771|ref|YP_006775653.1| - 0.0019 17.6 11.2 0.14 11.6 5.8 2.5 1 1 1 2 2 2 2 Sap, sulfolipid-1-addressing protein LysE PF01810.18 gi|407464771|ref|YP_006775653.1| - 0.16 11.4 15.6 1.3 8.5 13.8 2.3 1 1 1 2 2 2 0 LysE type translocator DUF4112 PF13430.6 gi|407464771|ref|YP_006775653.1| - 0.19 12.0 0.2 0.19 12.0 0.2 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4112) DUF2781 PF10914.8 gi|407464771|ref|YP_006775653.1| - 0.43 11.0 5.1 0.14 12.6 0.4 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2781) Tetraspanin PF00335.20 gi|407464771|ref|YP_006775653.1| - 7.5 6.2 20.9 0.058 13.1 2.8 3.1 1 1 2 3 3 3 0 Tetraspanin family Aminotran_1_2 PF00155.21 gi|407464772|ref|YP_006775654.1| - 3.7e-55 187.6 0.0 4.2e-55 187.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|407464772|ref|YP_006775654.1| - 0.0002 20.0 0.1 0.00034 19.3 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|407464772|ref|YP_006775654.1| - 0.00089 18.6 0.0 0.0023 17.2 0.0 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase IF2_N PF04760.15 gi|407464772|ref|YP_006775654.1| - 0.015 15.1 0.8 0.06 13.2 0.8 2.1 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region CTK3_C PF12350.8 gi|407464772|ref|YP_006775654.1| - 0.045 13.9 0.9 0.11 12.7 0.9 1.6 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 C-terminus DUF148 PF02520.17 gi|407464772|ref|YP_006775654.1| - 0.053 13.6 0.5 0.26 11.4 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function DUF148 Aminotran_5 PF00266.19 gi|407464772|ref|YP_006775654.1| - 0.086 11.8 0.1 0.15 11.0 0.1 1.3 1 0 0 1 1 1 0 Aminotransferase class-V DUF1947 PF09183.10 gi|407464772|ref|YP_006775654.1| - 1.5 9.2 8.1 24 5.3 0.0 4.5 5 1 1 6 6 6 0 Domain of unknown function (DUF1947) Radical_SAM PF04055.21 gi|407464773|ref|YP_006775655.1| - 3.1e-19 70.0 1.0 1.9e-18 67.4 0.5 2.0 2 0 0 2 2 2 1 Radical SAM superfamily BATS PF06968.13 gi|407464773|ref|YP_006775655.1| - 3.3e-12 46.4 0.0 7.6e-12 45.2 0.0 1.6 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Aminotran_3 PF00202.21 gi|407464774|ref|YP_006775656.1| - 5.1e-101 338.3 0.2 6.2e-101 338.0 0.2 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.21 gi|407464774|ref|YP_006775656.1| - 0.00049 19.5 0.0 0.0008 18.8 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Terminase_4 PF05119.12 gi|407464774|ref|YP_006775656.1| - 0.048 14.1 0.2 1.1 9.7 0.0 2.6 2 0 0 2 2 2 0 Phage terminase, small subunit CheC PF04509.12 gi|407464774|ref|YP_006775656.1| - 0.25 11.3 1.4 0.42 10.5 0.0 2.1 2 0 0 2 2 2 0 CheC-like family SRP54_N PF02881.19 gi|407464774|ref|YP_006775656.1| - 0.37 11.0 2.3 0.41 10.9 0.5 2.1 2 1 0 2 2 2 0 SRP54-type protein, helical bundle domain AAA_26 PF13500.6 gi|407464775|ref|YP_006775657.1| - 4e-39 134.5 0.1 4.6e-39 134.3 0.1 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|407464775|ref|YP_006775657.1| - 1.4e-12 47.8 0.1 2e-12 47.3 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|407464775|ref|YP_006775657.1| - 0.00015 21.3 3.2 0.24 10.8 0.1 2.7 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase DUF1611 PF07755.11 gi|407464775|ref|YP_006775657.1| - 0.0016 17.8 0.4 0.32 10.2 0.1 2.4 2 1 0 2 2 2 2 Domain of unknown function (DUF1611_C) P-loop domain MobB PF03205.14 gi|407464775|ref|YP_006775657.1| - 0.026 14.4 0.5 5.8 6.8 0.0 2.9 2 1 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B ASL_C PF08328.11 gi|407464776|ref|YP_006775658.1| - 0.15 12.1 0.8 0.32 11.1 0.1 1.8 2 1 0 2 2 2 0 Adenylosuccinate lyase C-terminal HMG_CoA_synt_C PF08540.10 gi|407464777|ref|YP_006775659.1| - 6.3e-33 114.6 0.1 9.9e-33 114.0 0.1 1.3 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.17 gi|407464777|ref|YP_006775659.1| - 1.8e-30 106.1 0.2 3e-30 105.4 0.2 1.3 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal Thioredoxin_4 PF13462.6 gi|407464778|ref|YP_006775660.1| - 1.5e-29 103.3 0.0 1.9e-29 103.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|407464778|ref|YP_006775660.1| - 6.5e-16 58.7 0.0 1.1e-14 54.7 0.0 2.0 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 gi|407464778|ref|YP_006775660.1| - 5.4e-06 26.8 0.0 8.9e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain DUF5314 PF17241.2 gi|407464778|ref|YP_006775660.1| - 0.045 13.4 0.0 0.11 12.2 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5314) DUF309 PF03745.14 gi|407464778|ref|YP_006775660.1| - 0.21 11.3 0.5 0.38 10.5 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF309) Hypoth_Ymh PF09509.10 gi|407464779|ref|YP_006775661.1| - 2.4 8.0 7.2 1 9.3 1.9 2.6 2 1 1 3 3 3 0 Protein of unknown function (Hypoth_ymh) Mcp5_PH PF12814.7 gi|407464780|ref|YP_006775662.1| - 0.3 11.2 4.4 0.19 11.9 2.3 1.6 1 1 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology YABBY PF04690.13 gi|407464780|ref|YP_006775662.1| - 0.42 11.2 6.4 0.56 10.8 6.4 1.1 1 0 0 1 1 1 0 YABBY protein Gin PF10764.9 gi|407464781|ref|YP_006775663.1| - 0.029 14.3 2.6 1.2 9.1 0.4 2.2 2 0 0 2 2 2 0 Inhibitor of sigma-G Gin zf-C3HC4_3 PF13920.6 gi|407464781|ref|YP_006775663.1| - 0.03 14.2 1.5 2.7 7.9 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Peptidase_C71 PF12386.8 gi|407464781|ref|YP_006775663.1| - 0.031 13.9 0.3 0.033 13.8 0.3 1.2 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei DUF2180 PF09947.9 gi|407464781|ref|YP_006775663.1| - 0.049 13.6 3.6 2.5 8.1 0.3 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2180) HNH_5 PF14279.6 gi|407464781|ref|YP_006775663.1| - 0.25 11.2 4.5 0.44 10.4 0.6 2.2 2 0 0 2 2 2 0 HNH endonuclease zf-C2HE PF16278.5 gi|407464781|ref|YP_006775663.1| - 0.71 10.4 5.5 0.28 11.7 0.4 2.0 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger ProRS-C_1 PF09180.11 gi|407464781|ref|YP_006775663.1| - 0.81 9.9 5.9 1.6 9.0 0.4 2.1 1 1 1 2 2 2 0 Prolyl-tRNA synthetase, C-terminal DUF4451 PF14616.6 gi|407464781|ref|YP_006775663.1| - 0.81 9.9 6.3 0.2 11.9 2.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4451) DUF21 PF01595.20 gi|407464782|ref|YP_006775664.1| - 6.7e-50 169.2 0.1 9.7e-50 168.7 0.1 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|407464782|ref|YP_006775664.1| - 3e-17 62.4 4.1 3.1e-17 62.4 1.1 2.3 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 gi|407464782|ref|YP_006775664.1| - 1.1e-14 54.6 1.8 5.4e-06 26.7 0.1 3.0 2 0 0 2 2 2 2 CBS domain PALP PF00291.25 gi|407464783|ref|YP_006775665.1| - 1.6e-48 165.6 0.0 2e-48 165.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PK_C PF02887.16 gi|407464783|ref|YP_006775665.1| - 0.13 12.5 1.1 1.9 8.8 0.4 2.3 2 0 0 2 2 2 0 Pyruvate kinase, alpha/beta domain Rx_N PF18052.1 gi|407464784|ref|YP_006775666.1| - 0.055 13.7 0.1 0.23 11.8 0.0 1.9 1 1 1 2 2 2 0 Rx N-terminal domain GIT1_C PF12205.8 gi|407464785|ref|YP_006775667.1| - 0.00082 19.5 0.1 0.00097 19.2 0.1 1.1 1 0 0 1 1 1 1 G protein-coupled receptor kinase-interacting protein 1 C term SesA PF17107.5 gi|407464785|ref|YP_006775667.1| - 0.0061 16.7 0.4 0.0077 16.4 0.4 1.2 1 0 0 1 1 1 1 N-terminal domain on NACHT_NTPase and P-loop NTPases IFT20 PF14931.6 gi|407464785|ref|YP_006775667.1| - 0.023 14.8 0.4 2.3 8.4 0.0 2.1 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 YtxH PF12732.7 gi|407464785|ref|YP_006775667.1| - 0.041 14.4 1.6 1.7 9.2 0.0 2.1 2 0 0 2 2 2 0 YtxH-like protein Fib_alpha PF08702.10 gi|407464785|ref|YP_006775667.1| - 0.077 13.2 0.6 1.6 8.9 0.1 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Hjc PF01870.18 gi|407464787|ref|YP_006775669.1| - 1.7e-05 24.7 0.0 3.1e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) DUF35_N PF12172.8 gi|407464789|ref|YP_006775671.1| - 0.00045 20.0 1.3 0.00077 19.3 1.3 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF3913 PF13052.6 gi|407464789|ref|YP_006775671.1| - 0.032 14.5 0.0 0.056 13.7 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3913) Tudor_2 PF18104.1 gi|407464789|ref|YP_006775671.1| - 0.13 12.0 0.1 0.25 11.0 0.1 1.6 1 0 0 1 1 1 0 Jumonji domain-containing protein 2A Tudor domain Thiolase_N PF00108.23 gi|407464790|ref|YP_006775672.1| - 2.6e-12 46.7 0.2 6.5e-11 42.1 0.2 2.3 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|407464790|ref|YP_006775672.1| - 1.7e-10 40.6 0.1 4e-10 39.4 0.1 1.6 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|407464790|ref|YP_006775672.1| - 0.0016 18.1 0.1 0.0073 15.9 0.1 2.0 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|407464790|ref|YP_006775672.1| - 0.026 14.4 0.0 0.071 13.0 0.0 1.7 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ketoacyl-synt_C PF02801.22 gi|407464790|ref|YP_006775672.1| - 0.13 12.3 1.1 16 5.5 0.0 3.0 3 0 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain Bac_luciferase PF00296.20 gi|407464791|ref|YP_006775673.1| - 3.3e-60 204.1 0.0 3.9e-60 203.9 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase CR6_interact PF10147.9 gi|407464792|ref|YP_006775674.1| - 0.021 14.5 5.4 0.022 14.5 5.4 1.0 1 0 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 Pyr_excise PF03013.14 gi|407464792|ref|YP_006775674.1| - 0.031 14.2 1.7 0.034 14.1 1.7 1.0 1 0 0 1 1 1 0 Pyrimidine dimer DNA glycosylase PriC PF07445.12 gi|407464792|ref|YP_006775674.1| - 0.035 14.0 3.7 0.04 13.8 3.7 1.0 1 0 0 1 1 1 0 Primosomal replication protein priC GIY-YIG PF01541.24 gi|407464792|ref|YP_006775674.1| - 0.073 13.4 4.8 0.082 13.2 4.8 1.2 1 0 0 1 1 1 0 GIY-YIG catalytic domain HAD_2 PF13419.6 gi|407464792|ref|YP_006775674.1| - 0.091 12.8 3.3 0.097 12.8 3.3 1.0 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF1664 PF07889.12 gi|407464792|ref|YP_006775674.1| - 0.11 12.5 3.6 0.13 12.2 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) RPW8 PF05659.11 gi|407464792|ref|YP_006775674.1| - 0.21 11.3 6.4 0.24 11.1 6.4 1.1 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Erf4 PF10256.9 gi|407464792|ref|YP_006775674.1| - 0.24 11.5 2.2 0.6 10.2 0.8 1.9 1 1 1 2 2 2 0 Golgin subfamily A member 7/ERF4 family Tiam_CC_Ex PF18385.1 gi|407464792|ref|YP_006775674.1| - 0.43 11.0 3.9 1.4 9.4 0.7 2.0 1 1 1 2 2 2 0 T-lymphoma invasion and metastasis CC-Ex domain DUF16 PF01519.16 gi|407464792|ref|YP_006775674.1| - 0.61 10.6 7.9 1.2 9.6 7.9 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 FapA PF03961.13 gi|407464792|ref|YP_006775674.1| - 1.5 7.3 10.1 1.6 7.2 10.1 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A GTP-bdg_M PF16360.5 gi|407464792|ref|YP_006775674.1| - 7.2 7.3 7.5 7.2 7.3 1.7 2.1 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region TIR PF01582.20 gi|407464793|ref|YP_006775675.1| - 0.029 14.2 0.3 0.033 14.0 0.3 1.1 1 0 0 1 1 1 0 TIR domain NTP_transferase PF00483.23 gi|407464794|ref|YP_006775676.1| - 1.5e-30 106.6 0.3 2.9e-30 105.7 0.3 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|407464794|ref|YP_006775676.1| - 2.2e-11 44.4 0.0 2.9e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|407464794|ref|YP_006775676.1| - 0.0075 16.0 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FMP23 PF17315.2 gi|407464795|ref|YP_006775677.1| - 0.054 13.7 0.0 0.061 13.5 0.0 1.1 1 0 0 1 1 1 0 Found in mitochondrial proteome DUF5378 PF17349.2 gi|407464796|ref|YP_006775678.1| - 0.013 14.9 0.7 0.013 14.9 0.7 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5378) DUF4064 PF13273.6 gi|407464796|ref|YP_006775678.1| - 0.031 14.6 4.8 0.031 14.6 4.8 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF4064) DUF1516 PF07457.11 gi|407464796|ref|YP_006775678.1| - 0.32 11.2 7.1 1.3 9.3 1.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1516) DUF4418 PF14387.6 gi|407464796|ref|YP_006775678.1| - 0.41 10.9 7.6 0.038 14.2 1.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4418) SecE PF00584.20 gi|407464796|ref|YP_006775678.1| - 2.9 7.9 6.4 11 6.0 0.1 2.3 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex DUF202 PF02656.15 gi|407464796|ref|YP_006775678.1| - 5.7 7.5 11.4 6.4 7.3 6.6 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF202) DUF2207 PF09972.9 gi|407464796|ref|YP_006775678.1| - 8.4 5.0 9.6 2.6 6.7 1.9 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) ATP-grasp PF02222.22 gi|407464797|ref|YP_006775679.1| - 1.1e-56 191.1 0.1 1.8e-56 190.4 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 gi|407464797|ref|YP_006775679.1| - 7.3e-13 48.0 0.1 1.7e-12 46.8 0.0 1.7 2 0 0 2 2 2 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATP-grasp_3 PF02655.14 gi|407464797|ref|YP_006775679.1| - 1.2e-06 28.7 0.5 2.9e-06 27.4 0.5 1.7 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|407464797|ref|YP_006775679.1| - 1.3e-05 24.9 0.2 5.3e-05 22.8 0.2 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus DUF1297 PF06973.12 gi|407464797|ref|YP_006775679.1| - 0.0012 18.4 0.0 0.0021 17.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) GARS_A PF01071.19 gi|407464797|ref|YP_006775679.1| - 0.074 12.8 0.2 0.14 11.9 0.0 1.6 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PglD_N PF17836.1 gi|407464797|ref|YP_006775679.1| - 0.089 13.4 0.1 0.47 11.1 0.1 2.3 1 1 0 1 1 1 0 PglD N-terminal domain AIRC PF00731.20 gi|407464798|ref|YP_006775680.1| - 6.3e-59 197.8 0.3 8e-59 197.5 0.3 1.1 1 0 0 1 1 1 1 AIR carboxylase PrpR_N PF06506.11 gi|407464798|ref|YP_006775680.1| - 0.0029 17.2 0.2 0.0061 16.2 0.1 1.7 2 0 0 2 2 2 1 Propionate catabolism activator Asp_Glu_race PF01177.22 gi|407464798|ref|YP_006775680.1| - 0.0099 15.7 0.1 0.015 15.1 0.1 1.5 1 1 0 1 1 1 1 Asp/Glu/Hydantoin racemase PALP PF00291.25 gi|407464799|ref|YP_006775681.1| - 4e-87 292.4 1.9 7.5e-87 291.5 1.1 1.6 2 0 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme ACT_4 PF13291.6 gi|407464799|ref|YP_006775681.1| - 0.00082 19.9 0.1 0.0021 18.6 0.1 1.6 1 0 0 1 1 1 1 ACT domain Peripla_BP_4 PF13407.6 gi|407464799|ref|YP_006775681.1| - 0.0024 17.5 0.7 2.6 7.6 0.9 2.4 2 1 0 2 2 2 2 Periplasmic binding protein domain ACT PF01842.25 gi|407464799|ref|YP_006775681.1| - 0.012 15.4 0.1 0.031 14.0 0.1 1.7 1 0 0 1 1 1 0 ACT domain Thr_dehydrat_C PF00585.18 gi|407464799|ref|YP_006775681.1| - 0.015 15.1 0.0 0.089 12.6 0.0 2.1 2 0 0 2 2 2 0 C-terminal regulatory domain of Threonine dehydratase GFRP PF06399.13 gi|407464800|ref|YP_006775682.1| - 0.014 15.2 0.0 0.13 12.2 0.0 2.3 2 0 0 2 2 2 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) SLIDE PF09111.10 gi|407464800|ref|YP_006775682.1| - 0.089 12.8 3.0 0.089 12.8 1.0 2.0 2 1 0 2 2 2 0 SLIDE MRP-S23 PF10484.9 gi|407464800|ref|YP_006775682.1| - 0.95 9.7 4.7 0.45 10.8 0.7 2.3 2 1 1 3 3 3 0 Mitochondrial ribosomal protein S23 Guanylate_cyc PF00211.20 gi|407464801|ref|YP_006775683.1| - 2.3e-15 56.7 0.2 3.3e-15 56.2 0.2 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain DivIC PF04977.15 gi|407464802|ref|YP_006775684.1| - 0.024 14.4 0.2 0.038 13.7 0.2 1.4 1 0 0 1 1 1 0 Septum formation initiator Prp19 PF08606.11 gi|407464802|ref|YP_006775684.1| - 0.09 12.8 0.6 0.09 12.8 0.6 1.7 2 0 0 2 2 2 0 Prp19/Pso4-like Fungal_TACC PF12709.7 gi|407464802|ref|YP_006775684.1| - 2.4 8.7 8.9 0.13 12.7 2.8 1.9 2 1 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Glyoxalase_2 PF12681.7 gi|407464804|ref|YP_006775686.1| - 1.2e-09 38.1 0.0 1.6e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|407464804|ref|YP_006775686.1| - 1e-08 35.4 0.0 2e-08 34.5 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|407464804|ref|YP_006775686.1| - 0.00096 19.9 0.0 0.0012 19.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 gi|407464804|ref|YP_006775686.1| - 0.0076 16.5 0.0 0.23 11.8 0.0 2.1 1 1 1 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AsnC_trans_reg PF01037.21 gi|407464805|ref|YP_006775687.1| - 2.8e-07 30.4 0.0 3e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain FtsX_ECD PF18075.1 gi|407464805|ref|YP_006775687.1| - 0.025 15.2 0.2 0.056 14.1 0.2 1.5 1 1 0 1 1 1 0 FtsX extracellular domain GYD PF08734.11 gi|407464805|ref|YP_006775687.1| - 0.11 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 GYD domain PTPS PF01242.19 gi|407464806|ref|YP_006775688.1| - 0.056 13.4 0.1 0.081 12.9 0.1 1.3 1 0 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase DUF2228 PF10228.9 gi|407464807|ref|YP_006775689.1| - 0.48 10.1 6.9 0.5 10.1 6.9 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2228) CEP1-DNA_bind PF09287.10 gi|407464808|ref|YP_006775690.1| - 0.034 13.8 0.0 0.034 13.8 0.0 1.0 1 0 0 1 1 1 0 CEP-1, DNA binding Phage_DsbA PF11126.8 gi|407464808|ref|YP_006775690.1| - 0.059 13.6 0.1 0.1 12.8 0.1 1.5 1 1 0 1 1 1 0 Transcriptional regulator DsbA Cob_adeno_trans PF01923.18 gi|407464809|ref|YP_006775691.1| - 2.9e-55 186.9 0.0 3.2e-55 186.7 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase HD_3 PF13023.6 gi|407464810|ref|YP_006775692.1| - 5.4e-39 133.8 0.9 6.4e-39 133.5 0.9 1.0 1 0 0 1 1 1 1 HD domain HD_2 PF12917.7 gi|407464810|ref|YP_006775692.1| - 5.3e-17 62.1 0.7 7.2e-17 61.7 0.7 1.2 1 0 0 1 1 1 1 HD containing hydrolase-like enzyme HD PF01966.22 gi|407464810|ref|YP_006775692.1| - 1.9e-05 24.8 0.2 5.9e-05 23.3 0.2 1.8 1 1 0 1 1 1 1 HD domain Phage_T7_tail PF03906.14 gi|407464812|ref|YP_006775694.1| - 0.07 12.8 0.0 0.082 12.6 0.0 1.2 1 0 0 1 1 1 0 Phage T7 tail fibre protein PepSY_like PF11396.8 gi|407464812|ref|YP_006775694.1| - 0.074 13.6 2.3 0.078 13.5 0.1 2.1 2 1 0 2 2 2 0 Putative beta-lactamase-inhibitor-like, PepSY-like Homeodomain PF00046.29 gi|407464813|ref|YP_006775695.1| - 0.13 12.2 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Homeodomain Saccharop_dh_N PF04455.12 gi|407464814|ref|YP_006775696.1| - 1.6e-33 115.1 0.2 4.8e-33 113.5 0.3 1.8 2 0 0 2 2 2 1 LOR/SDH bifunctional enzyme conserved region DS PF01916.17 gi|407464814|ref|YP_006775696.1| - 0.0022 17.3 2.1 0.036 13.3 0.1 2.8 1 1 2 3 3 3 1 Deoxyhypusine synthase Citrate_bind PF16114.5 gi|407464814|ref|YP_006775696.1| - 0.045 13.3 0.4 0.34 10.4 0.0 2.4 2 1 1 3 3 3 0 ATP citrate lyase citrate-binding ATPase PF06745.13 gi|407464815|ref|YP_006775697.1| - 7.4e-58 195.6 0.0 8.9e-58 195.4 0.0 1.0 1 0 0 1 1 1 1 KaiC GvpD PF07088.11 gi|407464815|ref|YP_006775697.1| - 1.7e-08 33.5 0.0 2.2e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 GvpD gas vesicle protein AAA_25 PF13481.6 gi|407464815|ref|YP_006775697.1| - 3.8e-05 23.3 0.0 9.3e-05 22.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain RecA PF00154.21 gi|407464815|ref|YP_006775697.1| - 0.00011 21.7 0.0 0.00024 20.6 0.0 1.5 2 0 0 2 2 2 1 recA bacterial DNA recombination protein DnaB_C PF03796.15 gi|407464815|ref|YP_006775697.1| - 0.0041 16.5 0.0 0.0095 15.3 0.0 1.6 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain AAA_24 PF13479.6 gi|407464815|ref|YP_006775697.1| - 0.0053 16.5 0.3 0.011 15.5 0.3 1.6 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|407464815|ref|YP_006775697.1| - 0.02 15.5 0.4 0.075 13.6 0.4 2.0 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|407464815|ref|YP_006775697.1| - 0.052 12.6 0.6 0.088 11.9 0.1 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein DUF2075 PF09848.9 gi|407464815|ref|YP_006775697.1| - 0.066 12.4 0.0 0.09 12.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 gi|407464815|ref|YP_006775697.1| - 0.066 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|407464815|ref|YP_006775697.1| - 0.067 13.4 0.0 0.14 12.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain Rad51 PF08423.11 gi|407464815|ref|YP_006775697.1| - 0.067 12.4 0.3 0.26 10.5 0.1 1.8 2 0 0 2 2 2 0 Rad51 ABC_tran PF00005.27 gi|407464815|ref|YP_006775697.1| - 0.069 13.7 0.3 0.099 13.2 0.2 1.5 1 1 0 1 1 1 0 ABC transporter AAA_11 PF13086.6 gi|407464815|ref|YP_006775697.1| - 0.08 12.7 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|407464815|ref|YP_006775697.1| - 0.081 13.2 0.0 0.14 12.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|407464815|ref|YP_006775697.1| - 0.1 12.6 0.0 0.25 11.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|407464815|ref|YP_006775697.1| - 0.12 12.8 0.2 0.16 12.3 0.2 1.4 1 1 0 1 1 1 0 AAA ATPase domain GTP_EFTU_D2 PF03144.25 gi|407464815|ref|YP_006775697.1| - 0.13 12.7 0.0 0.78 10.2 0.0 2.2 2 0 0 2 2 2 0 Elongation factor Tu domain 2 TrmB PF01978.19 gi|407464816|ref|YP_006775698.1| - 2.6e-11 43.3 0.0 5.1e-11 42.3 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|407464816|ref|YP_006775698.1| - 0.0055 16.5 0.0 0.01 15.6 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_9 PF08221.11 gi|407464816|ref|YP_006775698.1| - 0.02 14.9 0.0 0.043 13.9 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain PRESAN PF09687.10 gi|407464816|ref|YP_006775698.1| - 0.026 15.1 0.2 0.026 15.1 0.2 2.4 2 0 0 2 2 2 0 Plasmodium RESA N-terminal RRN3 PF05327.11 gi|407464817|ref|YP_006775699.1| - 1.4 7.4 4.7 1.5 7.2 4.7 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 SKA1 PF07160.12 gi|407464817|ref|YP_006775699.1| - 3.7 7.3 11.0 6.6 6.5 8.4 2.0 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 Mt_ATP-synt_B PF05405.14 gi|407464819|ref|YP_006775701.1| - 0.001 18.7 0.1 0.0015 18.2 0.1 1.2 1 0 0 1 1 1 1 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF5325 PF17259.2 gi|407464821|ref|YP_006775703.1| - 0.018 14.9 0.4 0.029 14.3 0.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5325) AAA_5 PF07728.14 gi|407464823|ref|YP_006775705.1| - 3.1e-19 69.4 0.0 4.6e-19 68.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) CbbQ_C PF08406.10 gi|407464823|ref|YP_006775705.1| - 9.3e-13 48.2 0.0 1.5e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 CbbQ/NirQ/NorQ C-terminal AAA PF00004.29 gi|407464823|ref|YP_006775705.1| - 3.2e-06 27.6 0.0 5.6e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|407464823|ref|YP_006775705.1| - 0.00013 21.8 0.0 0.00027 20.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_6 PF12774.7 gi|407464823|ref|YP_006775705.1| - 0.0067 15.4 0.0 0.012 14.6 0.0 1.5 1 1 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region MCM PF00493.23 gi|407464823|ref|YP_006775705.1| - 0.0072 15.4 0.0 0.018 14.1 0.0 1.7 1 1 0 1 1 1 1 MCM P-loop domain AAA_30 PF13604.6 gi|407464823|ref|YP_006775705.1| - 0.036 13.8 0.3 0.78 9.4 0.1 2.5 2 1 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|407464823|ref|YP_006775705.1| - 0.061 13.0 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_22 PF13401.6 gi|407464823|ref|YP_006775705.1| - 0.15 12.4 0.0 0.74 10.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|407464823|ref|YP_006775705.1| - 0.16 12.3 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain VWA PF00092.28 gi|407464824|ref|YP_006775706.1| - 4.6e-11 43.3 2.2 4.6e-11 43.3 0.5 1.8 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|407464824|ref|YP_006775706.1| - 5.5e-08 33.4 0.2 2.4e-07 31.4 0.1 2.1 2 0 0 2 2 2 1 von Willebrand factor type A domain DASH_Dad3 PF08656.10 gi|407464824|ref|YP_006775706.1| - 0.031 14.3 0.6 11 6.2 0.1 3.3 3 0 0 3 3 3 0 DASH complex subunit Dad3 RraB PF06877.11 gi|407464824|ref|YP_006775706.1| - 0.42 11.4 3.9 0.78 10.5 0.1 3.0 3 1 1 4 4 4 0 Regulator of ribonuclease activity B T2SSE PF00437.20 gi|407464826|ref|YP_006775708.1| - 1.3e-45 155.6 0.0 1.8e-45 155.1 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|407464826|ref|YP_006775708.1| - 5.7e-05 23.7 0.2 0.00026 21.5 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_23 PF13476.6 gi|407464826|ref|YP_006775708.1| - 0.00013 22.5 3.1 0.0033 17.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|407464826|ref|YP_006775708.1| - 0.00016 21.3 0.1 0.00032 20.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_7 PF12775.7 gi|407464826|ref|YP_006775708.1| - 0.0007 19.2 0.0 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_15 PF13175.6 gi|407464826|ref|YP_006775708.1| - 0.0047 16.7 0.0 0.0047 16.7 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain FtsK_SpoIIIE PF01580.18 gi|407464826|ref|YP_006775708.1| - 0.0053 16.1 1.2 0.03 13.7 0.2 2.1 2 0 0 2 2 2 1 FtsK/SpoIIIE family G-alpha PF00503.20 gi|407464826|ref|YP_006775708.1| - 0.0061 15.8 0.6 0.019 14.1 0.0 1.9 2 0 0 2 2 2 1 G-protein alpha subunit AAA_21 PF13304.6 gi|407464826|ref|YP_006775708.1| - 0.008 16.0 1.2 0.011 15.6 0.2 1.7 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Dynamin_N PF00350.23 gi|407464826|ref|YP_006775708.1| - 0.01 15.9 0.1 0.059 13.4 0.0 2.2 2 0 0 2 2 2 0 Dynamin family MMR_HSR1 PF01926.23 gi|407464826|ref|YP_006775708.1| - 0.021 14.9 0.1 0.059 13.5 0.1 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase PCMT PF01135.19 gi|407464826|ref|YP_006775708.1| - 0.033 13.9 0.0 0.073 12.8 0.0 1.5 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PduV-EutP PF10662.9 gi|407464826|ref|YP_006775708.1| - 0.035 13.9 0.4 0.1 12.3 0.0 2.0 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_22 PF13401.6 gi|407464826|ref|YP_006775708.1| - 0.035 14.4 0.0 0.11 12.8 0.0 1.8 2 0 0 2 2 1 0 AAA domain cobW PF02492.19 gi|407464826|ref|YP_006775708.1| - 0.039 13.6 0.0 0.13 11.8 0.0 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 gi|407464826|ref|YP_006775708.1| - 0.065 13.1 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 gi|407464826|ref|YP_006775708.1| - 0.07 13.5 0.0 0.14 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain Microtub_bd PF16796.5 gi|407464826|ref|YP_006775708.1| - 0.092 12.7 0.7 0.31 11.0 0.0 2.2 2 0 0 2 2 2 0 Microtubule binding AAA_30 PF13604.6 gi|407464826|ref|YP_006775708.1| - 0.11 12.3 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain Response_reg PF00072.24 gi|407464827|ref|YP_006775709.1| - 9.3e-22 77.3 1.7 1e-21 77.2 1.7 1.0 1 0 0 1 1 1 1 Response regulator receiver domain DUF364 PF04016.12 gi|407464827|ref|YP_006775709.1| - 0.00061 19.4 0.0 0.00081 19.0 0.0 1.1 1 0 0 1 1 1 1 Putative heavy-metal chelation CoA_binding_2 PF13380.6 gi|407464827|ref|YP_006775709.1| - 0.044 14.3 0.0 0.053 14.0 0.0 1.1 1 0 0 1 1 1 0 CoA binding domain SRP54 PF00448.22 gi|407464827|ref|YP_006775709.1| - 0.074 12.7 0.1 0.08 12.6 0.1 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain HATPase_c PF02518.26 gi|407464828|ref|YP_006775710.1| - 1.2e-27 96.6 0.2 2.2e-27 95.7 0.2 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|407464828|ref|YP_006775710.1| - 7.3e-15 54.8 0.0 2.5e-14 53.0 0.0 1.9 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 gi|407464828|ref|YP_006775710.1| - 3.7e-06 26.8 0.1 9.8e-06 25.4 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|407464828|ref|YP_006775710.1| - 0.00046 20.0 0.5 0.0012 18.7 0.1 2.0 2 0 0 2 2 2 1 GHKL domain DUF2096 PF09869.9 gi|407464828|ref|YP_006775710.1| - 0.0096 16.0 3.5 0.048 13.7 0.3 2.6 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2096) BAR PF03114.18 gi|407464828|ref|YP_006775710.1| - 0.018 14.7 4.0 0.031 13.9 3.1 2.0 1 1 1 2 2 2 0 BAR domain DUF4239 PF14023.6 gi|407464828|ref|YP_006775710.1| - 4.8 6.8 9.0 3.4 7.3 2.3 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF4239) SHOCT PF09851.9 gi|407464829|ref|YP_006775711.1| - 0.00037 20.1 2.0 0.00066 19.3 2.0 1.4 1 0 0 1 1 1 1 Short C-terminal domain DUF3859 PF12975.7 gi|407464829|ref|YP_006775711.1| - 0.007 16.4 0.0 0.13 12.3 0.0 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF3859) Aminotran_1_2 PF00155.21 gi|407464830|ref|YP_006775712.1| - 2.1e-38 132.4 0.0 2.8e-38 132.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|407464830|ref|YP_006775712.1| - 0.065 11.8 0.0 0.11 11.0 0.0 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|407464830|ref|YP_006775712.1| - 0.16 11.2 0.0 0.28 10.4 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase AMP-binding_C PF13193.6 gi|407464831|ref|YP_006775713.1| - 1.1e-12 48.7 0.0 1.5e-12 48.3 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|407464832|ref|YP_006775714.1| - 1.6e-79 267.5 0.0 2e-79 267.2 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 gi|407464832|ref|YP_006775714.1| - 2.4e-10 40.1 2.1 5.2e-10 39.1 2.1 1.6 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus Porin_2 PF02530.14 gi|407464832|ref|YP_006775714.1| - 0.039 13.2 0.0 0.064 12.5 0.0 1.2 1 0 0 1 1 1 0 Porin subfamily DUF1340 PF07067.11 gi|407464832|ref|YP_006775714.1| - 0.094 12.1 0.2 0.25 10.7 0.2 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1340) GatB_N PF02934.15 gi|407464834|ref|YP_006775716.1| - 4.2e-66 223.1 0.0 6.9e-66 222.4 0.0 1.3 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|407464834|ref|YP_006775716.1| - 3.1e-32 111.5 5.5 5.3e-32 110.7 5.5 1.4 1 0 0 1 1 1 1 GatB domain Amidase PF01425.21 gi|407464835|ref|YP_006775717.1| - 1.4e-136 456.1 0.0 1.5e-136 455.9 0.0 1.0 1 0 0 1 1 1 1 Amidase AI-2E_transport PF01594.16 gi|407464838|ref|YP_006775720.1| - 0.047 12.8 0.0 0.06 12.5 0.0 1.1 1 0 0 1 1 1 0 AI-2E family transporter tRNA-synt_2 PF00152.20 gi|407464839|ref|YP_006775721.1| - 3e-80 269.7 0.0 3.6e-80 269.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|407464839|ref|YP_006775721.1| - 2.3e-11 43.5 0.0 4e-11 42.7 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|407464839|ref|YP_006775721.1| - 0.03 13.8 0.2 0.12 11.9 0.0 2.0 3 0 0 3 3 3 0 tRNA synthetases class II core domain (F) TubC_N PF18563.1 gi|407464839|ref|YP_006775721.1| - 0.068 13.2 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 TubC N-terminal docking domain DUF4307 PF14155.6 gi|407464840|ref|YP_006775722.1| - 0.19 11.6 0.1 0.21 11.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF1297 PF06973.12 gi|407464842|ref|YP_006775724.1| - 4.7e-74 248.0 0.0 6.5e-74 247.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|407464842|ref|YP_006775724.1| - 8.4e-45 151.7 0.0 1.3e-44 151.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_3 PF02655.14 gi|407464842|ref|YP_006775724.1| - 0.025 14.6 0.1 0.058 13.4 0.1 1.6 1 0 0 1 1 1 0 ATP-grasp domain BPD_transp_1 PF00528.22 gi|407464843|ref|YP_006775725.1| - 1.9e-18 66.9 14.5 1.9e-18 66.9 14.5 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|407464844|ref|YP_006775726.1| - 4.6e-34 117.9 0.2 6.6e-34 117.4 0.2 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|407464844|ref|YP_006775726.1| - 9.7e-08 31.7 2.2 3.5e-05 23.3 2.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|407464844|ref|YP_006775726.1| - 7.1e-06 26.0 1.2 0.055 13.3 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|407464844|ref|YP_006775726.1| - 7.6e-06 25.6 0.1 1.6e-05 24.5 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_10 PF12846.7 gi|407464844|ref|YP_006775726.1| - 3.3e-05 23.0 0.7 4.9e-05 22.4 0.7 1.2 1 0 0 1 1 1 1 AAA-like domain AAA_22 PF13401.6 gi|407464844|ref|YP_006775726.1| - 0.0022 18.3 0.5 0.05 13.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|407464844|ref|YP_006775726.1| - 0.0028 17.6 0.6 0.011 15.7 0.4 2.0 1 1 1 2 2 2 1 RsgA GTPase Zeta_toxin PF06414.12 gi|407464844|ref|YP_006775726.1| - 0.0064 15.8 0.1 0.013 14.8 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin ATPase PF06745.13 gi|407464844|ref|YP_006775726.1| - 0.0084 15.5 0.6 1.5 8.1 0.0 2.3 2 0 0 2 2 2 2 KaiC AAA_24 PF13479.6 gi|407464844|ref|YP_006775726.1| - 0.011 15.5 1.0 0.17 11.6 0.6 2.1 1 1 1 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|407464844|ref|YP_006775726.1| - 0.015 14.5 1.4 0.19 10.9 0.6 2.6 1 1 1 2 2 2 0 NB-ARC domain AAA_23 PF13476.6 gi|407464844|ref|YP_006775726.1| - 0.019 15.5 0.2 0.044 14.3 0.1 1.7 2 0 0 2 2 2 0 AAA domain DUF3967 PF13152.6 gi|407464844|ref|YP_006775726.1| - 0.029 14.1 0.0 0.083 12.7 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3967) G-alpha PF00503.20 gi|407464844|ref|YP_006775726.1| - 0.03 13.5 0.2 0.045 12.9 0.2 1.4 1 1 0 1 1 1 0 G-protein alpha subunit MMR_HSR1 PF01926.23 gi|407464844|ref|YP_006775726.1| - 0.03 14.4 0.3 0.046 13.8 0.3 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF87 PF01935.17 gi|407464844|ref|YP_006775726.1| - 0.032 14.3 0.6 0.12 12.5 0.2 2.0 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_16 PF13191.6 gi|407464844|ref|YP_006775726.1| - 0.049 14.0 0.1 0.14 12.5 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain Mg_chelatase PF01078.21 gi|407464844|ref|YP_006775726.1| - 0.081 12.3 0.1 1.3 8.3 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|407464844|ref|YP_006775726.1| - 0.092 12.7 0.2 1 9.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 gi|407464844|ref|YP_006775726.1| - 0.22 11.2 2.0 1.3 8.7 2.0 2.0 1 1 0 1 1 1 0 AAA domain Phosphonate-bd PF12974.7 gi|407464845|ref|YP_006775727.1| - 1.6e-43 149.1 0.2 1.9e-43 148.9 0.2 1.1 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 gi|407464845|ref|YP_006775727.1| - 2.3e-06 27.2 0.0 5.7e-06 25.9 0.0 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1_2 PF13379.6 gi|407464845|ref|YP_006775727.1| - 0.0004 20.2 0.1 0.0021 17.8 0.1 2.2 1 1 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 gi|407464845|ref|YP_006775727.1| - 0.0017 18.3 0.0 0.032 14.2 0.0 2.2 2 0 0 2 2 2 1 NMT1/THI5 like Transferrin PF00405.17 gi|407464845|ref|YP_006775727.1| - 0.0023 17.1 0.0 0.0047 16.1 0.0 1.4 1 1 0 1 1 1 1 Transferrin TrmB PF01978.19 gi|407464846|ref|YP_006775728.1| - 0.00012 21.9 0.1 0.00022 21.0 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_7 PF02796.15 gi|407464846|ref|YP_006775728.1| - 0.00024 21.1 0.1 0.00045 20.2 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase DUF1492 PF07374.11 gi|407464846|ref|YP_006775728.1| - 0.00029 20.9 0.2 0.00043 20.4 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1492) HTH_11 PF08279.12 gi|407464846|ref|YP_006775728.1| - 0.00038 20.3 0.1 0.0008 19.3 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|407464846|ref|YP_006775728.1| - 0.00041 20.2 0.1 0.00098 18.9 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_23 PF13384.6 gi|407464846|ref|YP_006775728.1| - 0.0012 18.6 0.0 0.0022 17.7 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain DUF4423 PF14394.6 gi|407464846|ref|YP_006775728.1| - 0.0016 18.2 0.1 0.0018 18.0 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_IclR PF09339.10 gi|407464846|ref|YP_006775728.1| - 0.0022 17.8 0.0 0.003 17.3 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain FUR PF01475.19 gi|407464846|ref|YP_006775728.1| - 0.0053 16.9 0.1 0.0076 16.4 0.1 1.4 1 1 0 1 1 1 1 Ferric uptake regulator family HTH_20 PF12840.7 gi|407464846|ref|YP_006775728.1| - 0.0061 16.6 0.0 0.0081 16.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Mga PF05043.13 gi|407464846|ref|YP_006775728.1| - 0.023 15.3 0.5 0.04 14.5 0.4 1.7 1 1 0 1 1 1 0 Mga helix-turn-helix domain HTH_24 PF13412.6 gi|407464846|ref|YP_006775728.1| - 0.025 14.2 0.2 0.069 12.7 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|407464846|ref|YP_006775728.1| - 0.029 14.6 0.1 0.051 13.8 0.1 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Sigma70_r4_2 PF08281.12 gi|407464846|ref|YP_006775728.1| - 0.055 13.1 0.1 0.09 12.5 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_22 PF13309.6 gi|407464846|ref|YP_006775728.1| - 0.058 13.5 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 HTH domain MarR_2 PF12802.7 gi|407464846|ref|YP_006775728.1| - 0.082 12.8 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 gi|407464847|ref|YP_006775729.1| - 7.6e-07 29.1 0.0 1.1e-06 28.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|407464847|ref|YP_006775729.1| - 1.7e-05 24.6 0.3 3.7e-05 23.5 0.3 1.7 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|407464847|ref|YP_006775729.1| - 6.3e-05 22.8 0.3 7.8e-05 22.5 0.3 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit DUF742 PF05331.11 gi|407464847|ref|YP_006775729.1| - 0.0031 17.3 0.0 0.0038 17.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF742) HTH_IclR PF09339.10 gi|407464847|ref|YP_006775729.1| - 0.0077 16.0 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.12 gi|407464847|ref|YP_006775729.1| - 0.018 15.0 0.3 0.034 14.1 0.3 1.5 1 0 0 1 1 1 0 HTH domain PadR PF03551.14 gi|407464847|ref|YP_006775729.1| - 0.043 13.8 0.3 0.096 12.7 0.1 1.6 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family Mga PF05043.13 gi|407464847|ref|YP_006775729.1| - 0.059 14.0 0.2 0.36 11.5 0.1 2.0 2 0 0 2 2 2 0 Mga helix-turn-helix domain HTH_5 PF01022.20 gi|407464847|ref|YP_006775729.1| - 0.065 13.1 0.1 0.13 12.2 0.1 1.6 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|407464847|ref|YP_006775729.1| - 0.067 13.1 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 MarR family YycC PF14174.6 gi|407464847|ref|YP_006775729.1| - 0.072 12.9 0.1 0.2 11.5 0.0 1.9 2 0 0 2 2 2 0 YycC-like protein SdiA-regulated PF06977.11 gi|407464847|ref|YP_006775729.1| - 0.096 11.9 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 SdiA-regulated HTH_24 PF13412.6 gi|407464847|ref|YP_006775729.1| - 0.11 12.0 0.1 0.11 12.0 0.1 1.9 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding CbtA PF09490.10 gi|407464848|ref|YP_006775730.1| - 8.6e-51 173.1 0.6 9.7e-51 172.9 0.6 1.0 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtA) DUF1624 PF07786.12 gi|407464848|ref|YP_006775730.1| - 0.0024 17.5 1.2 0.0024 17.5 1.2 2.0 2 1 0 2 2 2 1 Protein of unknown function (DUF1624) INSIG PF07281.12 gi|407464848|ref|YP_006775730.1| - 0.069 12.8 0.5 10 5.7 0.0 2.5 2 1 0 2 2 2 0 Insulin-induced protein (INSIG) 5TM-5TMR_LYT PF07694.12 gi|407464848|ref|YP_006775730.1| - 0.31 10.5 12.5 0.63 9.5 3.6 3.7 2 1 2 4 4 4 0 5TMR of 5TMR-LYT Acyl_transf_3 PF01757.22 gi|407464848|ref|YP_006775730.1| - 0.59 9.1 9.5 1.2 8.1 9.5 1.7 1 1 0 1 1 1 0 Acyltransferase family MFS_1 PF07690.16 gi|407464848|ref|YP_006775730.1| - 5.7 5.8 19.1 0.036 13.0 6.8 2.4 2 1 0 2 2 2 0 Major Facilitator Superfamily ABC2_membrane_5 PF13346.6 gi|407464848|ref|YP_006775730.1| - 9.9 5.7 15.1 0.15 11.6 4.7 2.6 2 1 1 3 3 3 0 ABC-2 family transporter protein CbtB PF09489.10 gi|407464849|ref|YP_006775731.1| - 6.4e-14 51.8 2.1 8.3e-14 51.4 2.1 1.2 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtB) DUF4443 PF14544.6 gi|407464850|ref|YP_006775732.1| - 2.1e-05 24.7 0.0 3.1e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4443) HTH_Mga PF08280.11 gi|407464850|ref|YP_006775732.1| - 0.081 13.0 0.0 0.27 11.3 0.0 1.8 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain CbtB PF09489.10 gi|407464851|ref|YP_006775733.1| - 6.4e-14 51.8 2.1 8.3e-14 51.4 2.1 1.2 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtB) Response_reg PF00072.24 gi|407464852|ref|YP_006775734.1| - 2.1e-15 56.9 0.3 3.2e-15 56.2 0.3 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Thioredoxin_4 PF13462.6 gi|407464853|ref|YP_006775735.1| - 2.1e-30 106.1 0.0 2.5e-30 105.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|407464853|ref|YP_006775735.1| - 5.9e-11 42.5 0.0 6.2e-10 39.2 0.0 1.9 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 gi|407464853|ref|YP_006775735.1| - 1.7e-09 38.1 0.1 3e-09 37.3 0.1 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_5 PF13743.6 gi|407464853|ref|YP_006775735.1| - 0.009 15.7 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin eRF1_2 PF03464.15 gi|407464854|ref|YP_006775736.1| - 6.5e-30 104.2 0.0 2.9e-29 102.1 0.0 2.0 2 0 0 2 2 2 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|407464854|ref|YP_006775736.1| - 1.8e-20 73.5 0.4 1.3e-19 70.7 0.1 2.3 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_1 PF03463.15 gi|407464854|ref|YP_006775736.1| - 9.5e-10 38.6 0.0 2.3e-09 37.3 0.0 1.7 2 0 0 2 2 2 1 eRF1 domain 1 baeRF_family10 PF18854.1 gi|407464854|ref|YP_006775736.1| - 1.2e-06 28.9 0.0 2.3e-06 27.9 0.0 1.5 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 acVLRF1 PF18859.1 gi|407464854|ref|YP_006775736.1| - 2.3e-06 27.9 0.0 3.9e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor HypA PF01155.19 gi|407464854|ref|YP_006775736.1| - 0.038 14.0 0.1 0.07 13.2 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|407464854|ref|YP_006775736.1| - 0.17 12.1 4.0 0.98 9.6 2.5 2.5 2 0 0 2 2 2 0 Zinc ribbon domain HIT PF01230.23 gi|407464855|ref|YP_006775737.1| - 1.3e-23 83.6 0.1 1.6e-23 83.3 0.1 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|407464855|ref|YP_006775737.1| - 5e-13 49.5 0.0 6.2e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding GalP_UDP_tr_C PF02744.17 gi|407464855|ref|YP_006775737.1| - 0.013 15.2 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain zinc_ribbon_13 PF09855.9 gi|407464857|ref|YP_006775739.1| - 0.0083 16.3 1.0 0.014 15.6 1.0 1.4 1 1 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TackOD1 PF18551.1 gi|407464857|ref|YP_006775739.1| - 0.021 14.5 0.5 0.028 14.1 0.5 1.2 1 1 0 1 1 1 0 Thaumarchaeal output domain 1 HypA PF01155.19 gi|407464857|ref|YP_006775739.1| - 0.11 12.5 0.8 1.6 8.8 0.1 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubredoxin PF00301.20 gi|407464857|ref|YP_006775739.1| - 0.27 11.3 2.6 8.5 6.5 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin TF_Zn_Ribbon PF08271.12 gi|407464857|ref|YP_006775739.1| - 0.61 9.6 3.9 3.7 7.1 3.9 2.1 1 1 0 1 1 1 0 TFIIB zinc-binding ILVD_EDD PF00920.21 gi|407464858|ref|YP_006775740.1| - 7.5e-209 694.6 5.8 8.5e-209 694.4 5.8 1.0 1 0 0 1 1 1 1 Dehydratase family DUF5011 PF16403.5 gi|407464859|ref|YP_006775741.1| - 6.2e-38 128.8 14.3 4.2e-20 71.6 4.2 3.3 2 0 0 2 2 2 2 Domain of unknown function (DUF5011) HYR PF02494.16 gi|407464859|ref|YP_006775741.1| - 2.5e-20 72.6 37.0 9.9e-07 29.0 1.2 8.0 8 0 0 8 8 8 4 HYR domain Big_3_3 PF13750.6 gi|407464859|ref|YP_006775741.1| - 0.033 13.8 17.6 1.3 8.6 0.3 5.4 3 1 2 5 5 5 0 Bacterial Ig-like domain (group 3) TSP_3 PF02412.18 gi|407464859|ref|YP_006775741.1| - 3.4 7.4 5.4 12 5.7 0.5 2.9 2 0 0 2 2 2 0 Thrombospondin type 3 repeat Big_3 PF07523.12 gi|407464859|ref|YP_006775741.1| - 5.9 7.3 19.7 2.2 8.7 1.5 4.8 5 0 0 5 5 5 0 Bacterial Ig-like domain (group 3) ETRAMP PF09716.10 gi|407464860|ref|YP_006775742.1| - 0.062 13.4 0.5 0.07 13.2 0.5 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) SVA PF05326.11 gi|407464861|ref|YP_006775743.1| - 0.028 14.4 0.2 0.028 14.4 0.2 1.2 1 0 0 1 1 1 0 Seminal vesicle autoantigen (SVA) Helicase_C_2 PF13307.6 gi|407464862|ref|YP_006775744.1| - 4.7e-21 75.7 0.1 1.5e-20 74.1 0.0 1.8 2 0 0 2 2 2 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|407464862|ref|YP_006775744.1| - 0.00011 21.9 1.3 0.0003 20.5 0.2 2.3 2 0 0 2 2 2 1 DEAD_2 GIY-YIG PF01541.24 gi|407464863|ref|YP_006775745.1| - 0.00029 21.0 0.2 0.00035 20.8 0.2 1.3 1 1 0 1 1 1 1 GIY-YIG catalytic domain MacB_PCD PF12704.7 gi|407464864|ref|YP_006775746.1| - 0.11 12.9 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 MacB-like periplasmic core domain SAM_KSR1 PF13543.6 gi|407464865|ref|YP_006775747.1| - 0.036 14.2 0.0 0.052 13.7 0.0 1.3 1 0 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 Peptidase_M10 PF00413.24 gi|407464867|ref|YP_006775749.1| - 1.5e-12 47.7 4.3 4.6e-11 42.8 2.2 2.9 2 1 0 2 2 2 1 Matrixin Peptidase_M66 PF10462.9 gi|407464867|ref|YP_006775749.1| - 0.00017 20.7 0.1 0.00017 20.7 0.1 1.6 2 0 0 2 2 2 1 Peptidase M66 Reprolysin_3 PF13582.6 gi|407464867|ref|YP_006775749.1| - 0.00044 20.8 0.1 0.00044 20.8 0.1 2.0 2 1 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.8 gi|407464867|ref|YP_006775749.1| - 0.0012 18.5 0.2 0.0022 17.6 0.2 1.4 1 0 0 1 1 1 1 Dual-action HEIGH metallo-peptidase Reprolysin_4 PF13583.6 gi|407464867|ref|YP_006775749.1| - 0.0015 18.2 0.1 0.0026 17.4 0.1 1.4 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.6 gi|407464867|ref|YP_006775749.1| - 0.0058 16.8 1.1 0.0064 16.7 0.2 1.6 2 0 0 2 2 2 1 Metallo-peptidase family M12 Terminase_4 PF05119.12 gi|407464867|ref|YP_006775749.1| - 0.022 15.2 0.4 0.053 14.0 0.2 1.7 2 0 0 2 2 1 0 Phage terminase, small subunit Metallopep PF12044.8 gi|407464867|ref|YP_006775749.1| - 0.025 13.2 0.5 0.041 12.5 0.5 1.2 1 0 0 1 1 1 0 Putative peptidase family Peptidase_M54 PF07998.11 gi|407464867|ref|YP_006775749.1| - 0.025 14.5 0.1 0.061 13.3 0.1 1.6 1 0 0 1 1 1 0 Peptidase family M54 DUF4953 PF16313.5 gi|407464867|ref|YP_006775749.1| - 0.032 13.4 5.7 0.036 13.3 0.2 2.7 3 0 0 3 3 3 0 Met-zincin Reprolysin_2 PF13574.6 gi|407464867|ref|YP_006775749.1| - 0.037 13.9 0.2 0.064 13.1 0.2 1.4 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Snf7 PF03357.21 gi|407464867|ref|YP_006775749.1| - 0.11 12.1 4.4 0.21 11.2 4.4 1.5 1 0 0 1 1 1 0 Snf7 Astacin PF01400.24 gi|407464867|ref|YP_006775749.1| - 0.3 10.7 7.4 0.041 13.5 1.6 2.4 2 1 0 2 2 2 0 Astacin (Peptidase family M12A) LOH1CR12 PF10158.9 gi|407464867|ref|YP_006775749.1| - 0.91 9.5 8.1 13 5.8 8.1 2.4 1 1 0 1 1 1 0 Tumour suppressor protein zinc-ribbons_6 PF07191.12 gi|407464869|ref|YP_006775751.1| - 0.15 12.1 7.1 0.22 11.5 7.1 1.4 1 1 0 1 1 1 0 zinc-ribbons zf-RING_4 PF14570.6 gi|407464869|ref|YP_006775751.1| - 0.16 11.8 7.9 7.1 6.5 8.1 2.4 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-ribbon_3 PF13248.6 gi|407464869|ref|YP_006775751.1| - 0.18 11.3 6.8 0.77 9.2 0.1 2.6 3 0 0 3 3 3 0 zinc-ribbon domain YacG PF03884.14 gi|407464869|ref|YP_006775751.1| - 0.28 11.0 4.9 2.9 7.7 1.2 2.2 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG zf-C2H2_9 PF16293.5 gi|407464869|ref|YP_006775751.1| - 0.8 9.6 4.9 6.6 6.7 1.3 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger (1 copy) zf-TFIIB PF13453.6 gi|407464869|ref|YP_006775751.1| - 0.94 8.9 9.0 3.2 7.2 0.5 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger Ogr_Delta PF04606.12 gi|407464869|ref|YP_006775751.1| - 1.6 8.8 7.6 3.2 7.8 0.2 2.3 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger PriA_CRR PF18319.1 gi|407464869|ref|YP_006775751.1| - 1.7 8.7 7.7 2.6 8.1 0.6 2.2 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain DUF983 PF06170.12 gi|407464869|ref|YP_006775751.1| - 2 8.9 3.4 18 5.8 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF983) Sgf11 PF08209.11 gi|407464869|ref|YP_006775751.1| - 2 8.0 6.7 1.2 8.8 0.2 2.8 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) OrfB_Zn_ribbon PF07282.11 gi|407464869|ref|YP_006775751.1| - 2.4 8.2 7.0 1.5 8.8 0.6 2.1 1 1 1 2 2 2 0 Putative transposase DNA-binding domain sCache_3_2 PF17203.4 gi|407464875|ref|YP_006775757.1| - 0.035 14.2 0.0 0.048 13.8 0.0 1.4 1 0 0 1 1 1 0 Single cache domain 3 DUF4956 PF16316.5 gi|407464877|ref|YP_006775759.1| - 0.0038 16.9 0.2 0.0044 16.7 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4956) GDC-P PF02347.16 gi|407464877|ref|YP_006775759.1| - 0.0088 14.9 0.1 0.01 14.7 0.1 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein Rhodanese PF00581.20 gi|407464878|ref|YP_006775760.1| - 2.3e-11 44.2 0.0 2.9e-11 43.8 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF3880 PF12996.7 gi|407464878|ref|YP_006775760.1| - 0.02 15.0 0.0 0.026 14.6 0.0 1.3 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) zf-4CXXC_R1 PF10497.9 gi|407464879|ref|YP_006775761.1| - 0.0015 18.7 1.0 0.0019 18.4 1.0 1.2 1 0 0 1 1 1 1 Zinc-finger domain of monoamine-oxidase A repressor R1 FYVE PF01363.21 gi|407464879|ref|YP_006775761.1| - 0.025 14.7 1.3 0.044 13.9 1.3 1.4 1 0 0 1 1 1 0 FYVE zinc finger DZR PF12773.7 gi|407464879|ref|YP_006775761.1| - 0.029 14.4 0.6 0.046 13.7 0.6 1.2 1 0 0 1 1 1 0 Double zinc ribbon DUF4503 PF14951.6 gi|407464879|ref|YP_006775761.1| - 0.062 11.8 0.7 0.062 11.8 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4503) zinc_ribbon_10 PF10058.9 gi|407464879|ref|YP_006775761.1| - 0.14 11.9 1.6 0.24 11.1 1.6 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein PHD_2 PF13831.6 gi|407464879|ref|YP_006775761.1| - 0.26 10.9 3.9 0.54 9.8 0.5 2.2 2 0 0 2 2 2 0 PHD-finger PHD PF00628.29 gi|407464879|ref|YP_006775761.1| - 1.3 9.0 7.3 13 5.8 7.3 2.2 1 1 0 1 1 1 0 PHD-finger DUF4460 PF14687.6 gi|407464880|ref|YP_006775762.1| - 0.015 15.4 1.1 0.033 14.2 1.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) ACP_PD PF04336.12 gi|407464880|ref|YP_006775762.1| - 0.15 12.5 3.2 0.5 10.8 0.5 2.7 2 1 1 3 3 3 0 Acyl carrier protein phosphodiesterase PDDEXK_1 PF12705.7 gi|407464881|ref|YP_006775763.1| - 2.2e-09 37.6 1.3 3.9e-08 33.5 1.3 2.0 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily DUF3799 PF12684.7 gi|407464881|ref|YP_006775763.1| - 0.00076 19.3 3.2 0.0012 18.7 2.2 1.8 2 0 0 2 2 2 1 PDDEXK-like domain of unknown function (DUF3799) DUF2800 PF10926.8 gi|407464881|ref|YP_006775763.1| - 0.013 14.7 0.9 0.11 11.7 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2800) Spond_N PF06468.13 gi|407464881|ref|YP_006775763.1| - 0.019 15.1 0.2 0.023 14.8 0.2 1.3 1 1 0 1 1 1 0 Spondin_N CheZ PF04344.13 gi|407464881|ref|YP_006775763.1| - 0.023 14.6 1.2 0.074 13.0 0.6 1.9 1 1 1 2 2 2 0 Chemotaxis phosphatase, CheZ DEAD PF00270.29 gi|407464883|ref|YP_006775765.1| - 9.6e-28 97.1 0.0 4e-27 95.1 0.0 2.1 3 0 0 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|407464883|ref|YP_006775765.1| - 3e-17 63.0 1.7 1.2e-15 57.8 0.1 2.9 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|407464883|ref|YP_006775765.1| - 7.4e-08 32.6 1.0 2.2e-07 31.0 0.1 2.3 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DUF1998 PF09369.10 gi|407464883|ref|YP_006775765.1| - 1.4e-07 32.2 0.0 5.7e-07 30.2 0.0 2.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) AAA_11 PF13086.6 gi|407464883|ref|YP_006775765.1| - 0.0067 16.2 0.1 0.049 13.4 0.0 2.2 1 1 1 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|407464883|ref|YP_006775765.1| - 0.023 14.4 0.0 2.7 7.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|407464883|ref|YP_006775765.1| - 0.19 12.1 0.0 1.2 9.5 0.0 2.3 2 1 0 2 2 2 0 AAA domain TrmB PF01978.19 gi|407464884|ref|YP_006775766.1| - 4e-16 58.7 0.0 6.3e-16 58.0 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.9 gi|407464884|ref|YP_006775766.1| - 0.00052 20.1 0.3 0.0039 17.3 0.1 2.0 1 1 1 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) TFIIE_alpha PF02002.17 gi|407464884|ref|YP_006775766.1| - 0.015 15.1 0.1 0.022 14.6 0.1 1.4 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_24 PF13412.6 gi|407464884|ref|YP_006775766.1| - 0.016 14.7 0.1 0.032 13.8 0.0 1.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_9 PF08221.11 gi|407464884|ref|YP_006775766.1| - 0.034 14.2 0.0 0.078 13.1 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Penicillinase_R PF03965.16 gi|407464884|ref|YP_006775766.1| - 0.083 13.2 0.0 0.19 12.1 0.0 1.7 2 1 0 2 2 2 0 Penicillinase repressor Chorismate_bind PF00425.18 gi|407464885|ref|YP_006775767.1| - 1.5e-92 309.8 0.0 4.7e-92 308.2 0.0 1.7 2 0 0 2 2 2 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|407464885|ref|YP_006775767.1| - 3.6e-20 72.6 0.5 1.7e-16 60.8 0.1 2.8 2 1 0 2 2 2 2 Anthranilate synthase component I, N terminal region GATase PF00117.28 gi|407464886|ref|YP_006775768.1| - 7.5e-53 179.1 0.1 8.4e-53 179.0 0.1 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|407464886|ref|YP_006775768.1| - 8.1e-10 38.8 0.6 2.7e-09 37.1 0.6 1.7 1 1 0 1 1 1 1 Peptidase C26 Response_reg PF00072.24 gi|407464886|ref|YP_006775768.1| - 0.06 13.5 0.1 0.13 12.5 0.1 1.5 1 0 0 1 1 1 0 Response regulator receiver domain Glycos_transf_3 PF00591.21 gi|407464887|ref|YP_006775769.1| - 1.8e-78 263.7 0.8 1.8e-78 263.7 0.8 1.5 2 0 0 2 2 2 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|407464887|ref|YP_006775769.1| - 1.6e-12 47.1 1.1 2.6e-12 46.4 0.2 1.8 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain Utp13 PF08625.11 gi|407464887|ref|YP_006775769.1| - 0.13 12.1 0.2 0.33 10.8 0.0 1.7 2 0 0 2 2 2 0 Utp13 specific WD40 associated domain IGPS PF00218.21 gi|407464888|ref|YP_006775770.1| - 5.9e-68 228.8 1.5 7e-68 228.5 1.5 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.19 gi|407464888|ref|YP_006775770.1| - 1e-05 25.3 0.0 2.2e-05 24.3 0.0 1.6 1 1 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain NanE PF04131.14 gi|407464888|ref|YP_006775770.1| - 0.00015 21.0 0.6 0.00027 20.2 0.2 1.7 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase Cellulase PF00150.18 gi|407464888|ref|YP_006775770.1| - 0.012 15.0 0.1 0.02 14.3 0.1 1.3 1 0 0 1 1 1 0 Cellulase (glycosyl hydrolase family 5) FMN_dh PF01070.18 gi|407464888|ref|YP_006775770.1| - 0.012 14.6 0.0 0.27 10.2 0.0 2.0 2 0 0 2 2 2 0 FMN-dependent dehydrogenase His_biosynth PF00977.21 gi|407464888|ref|YP_006775770.1| - 0.016 14.6 0.0 0.03 13.8 0.0 1.5 1 0 0 1 1 1 0 Histidine biosynthesis protein AP_endonuc_2 PF01261.24 gi|407464888|ref|YP_006775770.1| - 0.018 14.5 0.0 0.037 13.5 0.0 1.5 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel ThiG PF05690.14 gi|407464888|ref|YP_006775770.1| - 0.054 12.8 0.0 0.12 11.7 0.0 1.5 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG PALP PF00291.25 gi|407464889|ref|YP_006775771.1| - 2e-45 155.5 1.1 2.5e-45 155.1 1.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Succ_CoA_lig PF13607.6 gi|407464889|ref|YP_006775771.1| - 0.035 13.9 1.4 0.041 13.7 0.1 1.7 2 0 0 2 2 2 0 Succinyl-CoA ligase like flavodoxin domain Trp_syntA PF00290.20 gi|407464890|ref|YP_006775772.1| - 9e-81 270.5 1.5 1e-80 270.3 1.5 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 gi|407464890|ref|YP_006775772.1| - 2.4e-08 33.7 0.2 1.1e-07 31.6 0.1 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein DHO_dh PF01180.21 gi|407464890|ref|YP_006775772.1| - 1.6e-07 30.8 0.8 2.1e-07 30.4 0.8 1.3 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase FMN_dh PF01070.18 gi|407464890|ref|YP_006775772.1| - 9.2e-06 24.9 0.3 6.8e-05 22.1 0.1 2.2 1 1 0 2 2 2 1 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|407464890|ref|YP_006775772.1| - 0.00073 18.6 1.4 0.005 15.9 1.2 2.1 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain BtpA PF03437.15 gi|407464890|ref|YP_006775772.1| - 0.00083 18.9 1.2 0.069 12.6 0.8 2.3 1 1 1 2 2 2 1 BtpA family PcrB PF01884.17 gi|407464890|ref|YP_006775772.1| - 0.0013 18.3 1.5 0.0071 15.8 0.4 2.3 2 1 0 2 2 2 1 PcrB family NanE PF04131.14 gi|407464890|ref|YP_006775772.1| - 0.0027 16.9 0.8 0.022 13.9 0.1 2.5 3 0 0 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|407464890|ref|YP_006775772.1| - 0.0031 16.9 0.1 0.0069 15.7 0.1 1.6 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG IGPS PF00218.21 gi|407464890|ref|YP_006775772.1| - 0.0062 15.7 0.1 0.19 10.8 0.0 2.2 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase PEP_mutase PF13714.6 gi|407464890|ref|YP_006775772.1| - 0.059 12.8 0.1 8.2 5.8 0.0 2.5 1 1 1 3 3 3 0 Phosphoenolpyruvate phosphomutase TMP-TENI PF02581.17 gi|407464890|ref|YP_006775772.1| - 0.063 12.6 2.2 0.23 10.8 1.7 2.3 2 1 0 2 2 2 0 Thiamine monophosphate synthase G3P_antiterm PF04309.12 gi|407464890|ref|YP_006775772.1| - 0.094 12.1 1.3 0.6 9.5 0.1 2.7 2 1 0 3 3 3 0 Glycerol-3-phosphate responsive antiterminator Ribul_P_3_epim PF00834.19 gi|407464890|ref|YP_006775772.1| - 0.14 11.5 0.5 0.2 11.0 0.5 1.4 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family TGT PF01702.18 gi|407464890|ref|YP_006775772.1| - 0.18 10.9 0.0 0.48 9.5 0.0 1.6 2 0 0 2 2 2 0 Queuine tRNA-ribosyltransferase CTP_synth_N PF06418.14 gi|407464891|ref|YP_006775773.1| - 8.2e-118 392.5 0.3 1.2e-117 392.0 0.3 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|407464891|ref|YP_006775773.1| - 7.6e-53 179.1 0.0 1.4e-52 178.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|407464891|ref|YP_006775773.1| - 3.8e-11 43.2 0.0 3.8e-10 39.9 0.0 2.2 2 0 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|407464891|ref|YP_006775773.1| - 0.0022 18.1 0.0 0.021 14.9 0.0 2.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DJ-1_PfpI PF01965.24 gi|407464891|ref|YP_006775773.1| - 0.046 13.5 0.0 0.096 12.5 0.0 1.5 1 0 0 1 1 1 0 DJ-1/PfpI family Peptidase_M10 PF00413.24 gi|407464892|ref|YP_006775774.1| - 1.6e-09 37.8 0.0 2.1e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Matrixin Peptidase_M57 PF12388.8 gi|407464892|ref|YP_006775774.1| - 0.00076 19.1 0.2 0.0011 18.6 0.2 1.4 1 1 0 1 1 1 1 Dual-action HEIGH metallo-peptidase DUF4953 PF16313.5 gi|407464892|ref|YP_006775774.1| - 0.0031 16.8 0.1 0.0062 15.8 0.1 1.4 1 0 0 1 1 1 1 Met-zincin DUF2268 PF10026.9 gi|407464892|ref|YP_006775774.1| - 0.0036 16.9 0.1 0.0061 16.2 0.1 1.4 1 1 0 1 1 1 1 Predicted Zn-dependent protease (DUF2268) Astacin PF01400.24 gi|407464892|ref|YP_006775774.1| - 0.006 16.2 0.0 0.006 16.2 0.0 1.6 2 0 0 2 2 2 1 Astacin (Peptidase family M12A) Reprolysin_3 PF13582.6 gi|407464892|ref|YP_006775774.1| - 0.0066 17.0 0.1 0.014 15.9 0.1 1.4 1 1 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M54 PF07998.11 gi|407464892|ref|YP_006775774.1| - 0.0068 16.4 0.1 0.012 15.6 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M54 Peptidase_M66 PF10462.9 gi|407464892|ref|YP_006775774.1| - 0.008 15.2 0.1 0.016 14.2 0.0 1.4 2 0 0 2 2 2 1 Peptidase M66 Reprolysin_5 PF13688.6 gi|407464892|ref|YP_006775774.1| - 0.0087 16.2 0.0 0.012 15.8 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_4 PF13583.6 gi|407464892|ref|YP_006775774.1| - 0.013 15.2 0.0 0.024 14.3 0.0 1.4 2 0 0 2 2 2 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_2 PF13574.6 gi|407464892|ref|YP_006775774.1| - 0.025 14.5 0.0 0.036 13.9 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M43 PF05572.13 gi|407464892|ref|YP_006775774.1| - 0.035 14.0 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Pregnancy-associated plasma protein-A Zincin_1 PF06262.11 gi|407464892|ref|YP_006775774.1| - 0.061 13.4 0.4 0.19 11.8 0.1 2.0 2 0 0 2 2 2 0 Zincin-like metallopeptidase Reprolysin PF01421.19 gi|407464892|ref|YP_006775774.1| - 0.074 13.0 0.3 0.19 11.6 0.0 1.8 2 0 0 2 2 2 0 Reprolysin (M12B) family zinc metalloprotease Metallopep PF12044.8 gi|407464892|ref|YP_006775774.1| - 0.08 11.5 0.2 0.28 9.8 0.3 1.7 2 0 0 2 2 2 0 Putative peptidase family QIL1 PF15884.5 gi|407464892|ref|YP_006775774.1| - 0.081 13.5 0.4 0.18 12.4 0.4 1.6 1 0 0 1 1 1 0 MICOS complex subunit MIC13, QIL1 NAD_kinase PF01513.21 gi|407464893|ref|YP_006775775.1| - 1.3e-30 106.6 0.2 2.4e-30 105.8 0.2 1.4 2 0 0 2 2 2 1 ATP-NAD kinase TrmB PF01978.19 gi|407464893|ref|YP_006775775.1| - 6.2e-06 26.0 2.9 0.005 16.7 0.3 3.7 3 1 1 4 4 4 2 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|407464893|ref|YP_006775775.1| - 4.4e-05 22.9 0.2 0.00021 20.8 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|407464893|ref|YP_006775775.1| - 0.00014 21.7 1.9 0.00034 20.5 0.1 2.3 3 0 0 3 3 3 1 MarR family RNA_pol_Rpc34 PF05158.12 gi|407464893|ref|YP_006775775.1| - 0.00074 19.0 0.4 0.0012 18.3 0.4 1.3 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit TPALS PF18178.1 gi|407464893|ref|YP_006775775.1| - 0.0016 18.0 0.0 0.0027 17.2 0.0 1.3 1 0 0 1 1 1 1 TIR- and PNP-associating SLOG family MarR_2 PF12802.7 gi|407464893|ref|YP_006775775.1| - 0.0023 17.8 0.0 0.0047 16.8 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|407464893|ref|YP_006775775.1| - 0.018 15.5 0.1 0.038 14.5 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|407464893|ref|YP_006775775.1| - 0.17 11.9 0.4 2.5 8.1 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain PfkB PF00294.24 gi|407464894|ref|YP_006775776.1| - 2.3e-13 50.1 0.0 8.9e-13 48.2 0.0 1.8 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 gi|407464894|ref|YP_006775776.1| - 0.11 11.8 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Ribosomal_S26e PF01283.19 gi|407464895|ref|YP_006775777.1| - 2e-24 86.1 1.3 2.4e-24 85.9 1.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S26e zf-dskA_traR PF01258.17 gi|407464895|ref|YP_006775777.1| - 0.027 14.4 0.1 1.6 8.8 0.0 2.3 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger ADD_ATRX PF17981.1 gi|407464895|ref|YP_006775777.1| - 0.053 13.4 0.2 0.053 13.4 0.2 1.6 2 0 0 2 2 2 0 Cysteine Rich ADD domain zinc_ribbon_4 PF13717.6 gi|407464895|ref|YP_006775777.1| - 0.25 11.3 2.3 0.65 10.0 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain CDP-OH_P_transf PF01066.21 gi|407464896|ref|YP_006775778.1| - 3e-11 43.9 0.4 3e-11 43.9 0.4 2.4 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase YbgT_YccB PF08173.11 gi|407464896|ref|YP_006775778.1| - 4.6 7.5 12.1 0.51 10.5 1.3 3.4 3 0 0 3 3 3 0 Membrane bound YbgT-like protein Arginase PF00491.21 gi|407464897|ref|YP_006775779.1| - 5.3e-66 223.0 0.0 7e-66 222.6 0.0 1.0 1 0 0 1 1 1 1 Arginase family tRNA-Thr_ED PF08915.11 gi|407464898|ref|YP_006775780.1| - 5.6e-43 146.3 0.1 1e-42 145.5 0.1 1.4 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|407464898|ref|YP_006775780.1| - 3e-24 85.0 1.2 5.8e-24 84.1 1.2 1.5 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|407464898|ref|YP_006775780.1| - 1.3e-16 61.1 0.1 3.1e-16 59.9 0.1 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Pentapeptide PF00805.22 gi|407464899|ref|YP_006775781.1| - 3.8e-33 112.7 29.4 9.3e-13 47.5 1.2 4.6 1 1 4 5 5 5 5 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|407464899|ref|YP_006775781.1| - 2.4e-23 82.1 0.1 7.3e-10 38.9 0.0 2.8 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|407464899|ref|YP_006775781.1| - 2.1e-12 47.0 1.0 1e-05 25.5 0.1 4.2 2 1 2 4 4 4 3 Pentapeptide repeats (9 copies) SPECT1 PF18680.1 gi|407464900|ref|YP_006775782.1| - 0.082 12.6 0.1 0.085 12.5 0.1 1.2 1 0 0 1 1 1 0 Plasmodium host cell traversal SPECT1 DS PF01916.17 gi|407464901|ref|YP_006775783.1| - 2.4e-75 253.5 0.0 2.8e-75 253.3 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Ribosomal_S25 PF03297.15 gi|407464903|ref|YP_006775785.1| - 5.6e-09 36.1 4.2 7.3e-09 35.7 4.2 1.1 1 0 0 1 1 1 1 S25 ribosomal protein TrmB PF01978.19 gi|407464903|ref|YP_006775785.1| - 0.00037 20.3 0.1 0.00047 20.0 0.1 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|407464903|ref|YP_006775785.1| - 0.00057 19.4 0.1 0.00078 19.0 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|407464903|ref|YP_006775785.1| - 0.0051 16.7 0.0 0.007 16.2 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|407464903|ref|YP_006775785.1| - 0.062 13.2 0.0 0.094 12.7 0.0 1.2 1 0 0 1 1 1 0 MarR family Cyclophil_like PF04126.13 gi|407464904|ref|YP_006775786.1| - 1.7e-10 40.8 0.0 1.8e-10 40.6 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin-like Cyclophil_like2 PF18050.1 gi|407464904|ref|YP_006775786.1| - 9e-06 25.6 0.0 1.1e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin-like family DUF3830 PF12903.7 gi|407464904|ref|YP_006775786.1| - 0.038 13.7 0.0 0.059 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3830) RNA_pol_Rpb6 PF01192.22 gi|407464905|ref|YP_006775787.1| - 6.6e-10 38.8 0.4 2e-09 37.2 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb6 Herpes_UL14 PF03580.14 gi|407464905|ref|YP_006775787.1| - 0.0089 16.3 1.5 0.015 15.6 1.5 1.3 1 0 0 1 1 1 1 Herpesvirus UL14-like protein Alba PF01918.21 gi|407464906|ref|YP_006775788.1| - 5.5e-12 45.3 0.9 7.7e-12 44.9 0.9 1.2 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 gi|407464906|ref|YP_006775788.1| - 0.026 14.5 0.5 0.036 14.0 0.5 1.3 1 1 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P HTH_3 PF01381.22 gi|407464907|ref|YP_006775789.1| - 2.9e-05 24.1 0.0 7.7e-05 22.7 0.0 1.8 1 1 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|407464907|ref|YP_006775789.1| - 0.015 15.3 0.1 0.07 13.2 0.0 2.0 1 1 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|407464907|ref|YP_006775789.1| - 0.015 15.0 0.0 0.027 14.3 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain DUF483 PF04467.12 gi|407464907|ref|YP_006775789.1| - 0.072 13.1 0.2 0.35 10.9 0.0 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF483) Cro PF09048.10 gi|407464907|ref|YP_006775789.1| - 0.082 13.0 0.0 0.28 11.3 0.0 1.8 2 1 0 2 2 2 0 Cro HTH_11 PF08279.12 gi|407464907|ref|YP_006775789.1| - 0.082 12.9 0.6 0.17 11.9 0.1 1.7 2 0 0 2 2 2 0 HTH domain DUF2551 PF10826.8 gi|407464907|ref|YP_006775789.1| - 0.12 12.6 0.0 15 5.9 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2551) Asn_synthase PF00733.21 gi|407464908|ref|YP_006775790.1| - 3.8e-35 122.2 0.0 7.3e-19 68.6 0.0 2.0 1 1 1 2 2 2 2 Asparagine synthase QueC PF06508.13 gi|407464908|ref|YP_006775790.1| - 9.4e-05 22.0 0.2 0.00034 20.2 0.2 1.8 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|407464908|ref|YP_006775790.1| - 0.00015 21.0 0.1 0.00024 20.3 0.1 1.3 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|407464908|ref|YP_006775790.1| - 0.0004 19.3 0.0 0.00079 18.3 0.0 1.5 1 1 0 1 1 1 1 tRNA methyl transferase ThiI PF02568.14 gi|407464908|ref|YP_006775790.1| - 0.011 15.4 0.0 0.023 14.3 0.0 1.5 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.20 gi|407464908|ref|YP_006775790.1| - 0.015 15.1 0.0 0.052 13.3 0.0 1.9 1 1 0 2 2 2 0 PP-loop family DZR PF12773.7 gi|407464908|ref|YP_006775790.1| - 0.1 12.7 1.0 0.22 11.6 1.0 1.5 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|407464908|ref|YP_006775790.1| - 0.33 10.4 3.3 0.87 9.1 3.3 1.7 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|407464908|ref|YP_006775790.1| - 2.8 7.8 5.8 9.6 6.1 0.4 2.4 1 1 1 2 2 2 0 zinc-ribbon domain YHS PF04945.13 gi|407464909|ref|YP_006775791.1| - 4.6e-13 49.0 0.1 5.4e-13 48.8 0.1 1.0 1 0 0 1 1 1 1 YHS domain Arc_trans_TRASH PF08394.10 gi|407464909|ref|YP_006775791.1| - 0.00013 22.3 0.8 0.00017 21.8 0.8 1.2 1 0 0 1 1 1 1 Archaeal TRASH domain ATPase-cat_bd PF12156.8 gi|407464909|ref|YP_006775791.1| - 0.00017 22.3 0.2 0.00021 21.9 0.2 1.1 1 0 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase Ta0938 PF11494.8 gi|407464909|ref|YP_006775791.1| - 0.02 15.1 0.3 0.02 15.1 0.3 1.1 1 0 0 1 1 1 0 Ta0938 CAP_GLY PF01302.25 gi|407464909|ref|YP_006775791.1| - 0.024 14.7 0.0 0.027 14.5 0.0 1.1 1 0 0 1 1 1 0 CAP-Gly domain Aldo_ket_red PF00248.21 gi|407464912|ref|YP_006775794.1| - 1.5e-21 76.9 0.0 9.6e-16 57.8 0.1 2.2 2 0 0 2 2 2 2 Aldo/keto reductase family DUF321 PF03778.13 gi|407464912|ref|YP_006775794.1| - 0.15 11.7 0.3 0.33 10.7 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF321) UbiA PF01040.18 gi|407464913|ref|YP_006775795.1| - 2.2e-27 96.0 15.2 2.7e-27 95.7 15.2 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family DNA_RNApol_7kD PF03604.13 gi|407464914|ref|YP_006775796.1| - 0.0056 16.3 4.7 0.15 11.7 0.4 2.2 2 0 0 2 2 2 2 DNA directed RNA polymerase, 7 kDa subunit RecR PF02132.15 gi|407464914|ref|YP_006775796.1| - 0.018 14.6 1.8 0.095 12.3 0.1 2.2 2 0 0 2 2 2 0 RecR protein Zn_ribbon_SprT PF17283.2 gi|407464914|ref|YP_006775796.1| - 0.024 14.5 0.9 1.9 8.5 0.0 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Invasin_D3 PF09134.10 gi|407464915|ref|YP_006775797.1| - 0.00028 21.1 10.3 0.97 9.8 0.0 5.1 5 0 0 5 5 5 3 Invasin, domain 3 Big_1 PF02369.16 gi|407464915|ref|YP_006775797.1| - 0.0016 18.4 0.0 0.0016 18.4 0.0 4.5 6 1 0 6 6 6 1 Bacterial Ig-like domain (group 1) Big_2 PF02368.18 gi|407464915|ref|YP_006775797.1| - 0.056 13.3 1.9 1.4 8.9 0.3 3.2 2 1 0 2 2 2 0 Bacterial Ig-like domain (group 2) Rhabdo_glycop PF00974.18 gi|407464915|ref|YP_006775797.1| - 0.075 11.5 0.0 0.12 10.8 0.0 1.2 1 0 0 1 1 1 0 Rhabdovirus spike glycoprotein Spore_YhaL PF14147.6 gi|407464915|ref|YP_006775797.1| - 0.095 12.4 1.4 0.2 11.4 1.4 1.5 1 0 0 1 1 1 0 Sporulation protein YhaL CarboxypepD_reg PF13620.6 gi|407464915|ref|YP_006775797.1| - 0.1 12.9 0.0 0.1 12.9 0.0 3.7 5 0 0 5 5 5 0 Carboxypeptidase regulatory-like domain Pilin_N PF07790.11 gi|407464916|ref|YP_006775798.1| - 4.8e-05 24.2 1.7 0.00012 22.9 0.5 2.1 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Arch_flagellin PF01917.16 gi|407464916|ref|YP_006775798.1| - 0.031 14.5 5.0 0.055 13.7 5.0 1.6 1 1 0 1 1 1 0 Archaebacterial flagellin PCuAC PF04314.13 gi|407464916|ref|YP_006775798.1| - 0.047 13.5 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 Copper chaperone PCu(A)C Transglut_C PF00927.22 gi|407464917|ref|YP_006775799.1| - 0.019 15.1 0.0 0.13 12.4 0.0 2.4 2 0 0 2 2 2 0 Transglutaminase family, C-terminal ig like domain TackOD1 PF18551.1 gi|407464920|ref|YP_006775802.1| - 4.7e-29 101.4 6.9 6.9e-29 100.8 6.9 1.2 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 Zn-ribbon_8 PF09723.10 gi|407464920|ref|YP_006775802.1| - 0.015 15.4 12.1 2 8.6 0.1 4.0 3 1 0 3 3 3 0 Zinc ribbon domain CxC7 PF18866.1 gi|407464920|ref|YP_006775802.1| - 0.068 13.3 0.9 0.068 13.3 0.9 2.5 2 1 1 3 3 3 0 CxC7 like cysteine cluster associated with KDZ transposases C1_4 PF07975.12 gi|407464920|ref|YP_006775802.1| - 0.11 12.8 5.3 1.5 9.2 1.7 2.6 2 0 0 2 2 2 0 TFIIH C1-like domain Cys_rich_KTR PF14205.6 gi|407464920|ref|YP_006775802.1| - 0.16 11.7 0.2 0.16 11.7 0.2 2.9 3 0 0 3 3 3 0 Cysteine-rich KTR zinc_ribbon_5 PF13719.6 gi|407464920|ref|YP_006775802.1| - 0.26 11.1 4.9 2.9 7.7 1.5 2.8 2 0 0 2 2 2 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|407464920|ref|YP_006775802.1| - 0.35 10.5 7.4 5.8 6.6 0.1 3.4 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger DZR PF12773.7 gi|407464920|ref|YP_006775802.1| - 0.58 10.2 7.5 4.8 7.3 6.9 2.3 1 1 1 2 2 2 0 Double zinc ribbon HypA PF01155.19 gi|407464920|ref|YP_006775802.1| - 0.75 9.8 8.7 14 5.8 0.3 3.2 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbons_6 PF07191.12 gi|407464920|ref|YP_006775802.1| - 0.93 9.5 10.9 2.2 8.3 4.1 2.5 1 1 2 3 3 3 0 zinc-ribbons Zn_Tnp_IS1595 PF12760.7 gi|407464920|ref|YP_006775802.1| - 1.4 8.9 7.0 12 6.0 1.2 2.6 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|407464920|ref|YP_006775802.1| - 4.7 7.2 11.1 12 6.0 3.4 2.9 2 1 0 2 2 2 0 zinc-ribbon domain T2SSE PF00437.20 gi|407464921|ref|YP_006775803.1| - 2.1e-49 168.0 0.0 3.9e-49 167.2 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein Zeta_toxin PF06414.12 gi|407464921|ref|YP_006775803.1| - 0.0038 16.5 0.0 0.0073 15.6 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin FtsK_SpoIIIE PF01580.18 gi|407464921|ref|YP_006775803.1| - 0.0045 16.4 0.0 0.0095 15.3 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_29 PF13555.6 gi|407464921|ref|YP_006775803.1| - 0.013 15.2 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|407464921|ref|YP_006775803.1| - 0.018 15.6 0.1 0.063 13.8 0.0 1.9 2 0 0 2 2 2 0 ABC transporter Scm3 PF10384.9 gi|407464921|ref|YP_006775803.1| - 0.042 13.6 2.7 1.6 8.5 0.7 3.4 3 0 0 3 3 3 0 Centromere protein Scm3 AAA_15 PF13175.6 gi|407464921|ref|YP_006775803.1| - 0.044 13.5 15.1 0.45 10.2 0.0 2.5 3 0 0 3 3 3 0 AAA ATPase domain DEAD PF00270.29 gi|407464921|ref|YP_006775803.1| - 0.12 12.1 0.0 0.24 11.1 0.0 1.5 1 0 0 1 1 1 0 DEAD/DEAH box helicase T2SSF PF00482.23 gi|407464922|ref|YP_006775804.1| - 7.1e-15 55.1 0.4 7.1e-15 55.1 0.4 2.6 4 0 0 4 4 4 1 Type II secretion system (T2SS), protein F Claudin_2 PF13903.6 gi|407464922|ref|YP_006775804.1| - 2.8 7.6 11.7 0.35 10.6 1.8 2.3 2 1 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction T2SSF PF00482.23 gi|407464923|ref|YP_006775805.1| - 1.2e-18 67.2 0.3 3.1e-18 65.9 0.3 1.7 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein F MtrG PF04210.13 gi|407464923|ref|YP_006775805.1| - 0.07 13.0 0.4 0.57 10.1 0.1 2.6 3 0 0 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G DUF1129 PF06570.11 gi|407464923|ref|YP_006775805.1| - 9.1 5.7 9.4 0.32 10.5 0.2 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF1129) TrmB PF01978.19 gi|407464924|ref|YP_006775806.1| - 1e-13 50.9 0.0 3.4e-13 49.3 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|407464924|ref|YP_006775806.1| - 2.9e-06 27.1 0.0 5.1e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|407464924|ref|YP_006775806.1| - 0.00018 21.3 0.0 0.00061 19.7 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|407464924|ref|YP_006775806.1| - 0.00019 21.4 0.1 0.00032 20.7 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Regulator_TrmB PF11495.8 gi|407464924|ref|YP_006775806.1| - 0.0037 16.5 0.0 0.0057 15.9 0.0 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_24 PF13412.6 gi|407464924|ref|YP_006775806.1| - 0.03 13.9 0.1 0.058 13.0 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|407464924|ref|YP_006775806.1| - 0.054 13.5 0.1 0.13 12.2 0.1 1.7 1 0 0 1 1 1 0 HTH domain HEAT_2 PF13646.6 gi|407464925|ref|YP_006775807.1| - 1.8e-10 41.0 0.1 6.6e-08 32.8 0.1 2.2 2 0 0 2 2 2 2 HEAT repeats HEAT PF02985.22 gi|407464925|ref|YP_006775807.1| - 0.00018 21.5 0.4 7.8 7.1 0.0 3.8 4 0 0 4 4 4 3 HEAT repeat PufQ PF05398.11 gi|407464926|ref|YP_006775808.1| - 0.096 12.8 0.4 0.24 11.5 0.4 1.6 1 0 0 1 1 1 0 PufQ cytochrome subunit Endonuc-BglII PF09195.11 gi|407464927|ref|YP_006775809.1| - 0.011 15.6 0.0 0.019 14.8 0.0 1.4 1 0 0 1 1 1 0 Restriction endonuclease BglII HicB PF05534.12 gi|407464928|ref|YP_006775810.1| - 0.0023 17.7 0.0 0.0041 16.9 0.0 1.4 1 0 0 1 1 1 1 HicB family CopG_antitoxin PF12441.8 gi|407464928|ref|YP_006775810.1| - 0.0069 16.9 0.9 0.021 15.3 0.2 2.1 2 1 1 3 3 3 1 CopG antitoxin of type II toxin-antitoxin system DUF5567 PF17722.1 gi|407464928|ref|YP_006775810.1| - 0.063 13.2 0.1 0.076 12.9 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5567) EamA PF00892.20 gi|407464929|ref|YP_006775811.1| - 6e-34 117.2 33.0 1.1e-17 64.5 11.1 2.1 2 0 0 2 2 2 2 EamA-like transporter family Insulin_TMD PF17870.1 gi|407464929|ref|YP_006775811.1| - 0.24 11.5 0.0 0.24 11.5 0.0 4.2 5 0 0 5 5 5 0 Insulin receptor trans-membrane segment Cation_ATPase_C PF00689.21 gi|407464929|ref|YP_006775811.1| - 0.35 10.6 17.6 0.91 9.2 7.7 3.5 3 1 0 3 3 3 0 Cation transporting ATPase, C-terminus TrmB PF01978.19 gi|407464930|ref|YP_006775812.1| - 1.8e-12 47.0 0.0 3.6e-12 46.0 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|407464930|ref|YP_006775812.1| - 6.8e-05 22.6 0.0 0.00013 21.6 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|407464930|ref|YP_006775812.1| - 0.00028 20.7 0.0 0.00088 19.1 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_5 PF01022.20 gi|407464930|ref|YP_006775812.1| - 0.00039 20.2 0.0 0.0016 18.3 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|407464930|ref|YP_006775812.1| - 0.0026 17.6 0.0 0.034 14.1 0.0 2.4 1 1 1 2 2 2 1 MarR family HTH_9 PF08221.11 gi|407464930|ref|YP_006775812.1| - 0.0043 17.1 0.0 0.064 13.4 0.0 2.6 2 1 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF2250 PF10007.9 gi|407464930|ref|YP_006775812.1| - 0.014 15.5 0.0 0.057 13.5 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_20 PF12840.7 gi|407464930|ref|YP_006775812.1| - 0.024 14.7 0.0 0.096 12.8 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_CodY PF08222.11 gi|407464930|ref|YP_006775812.1| - 0.024 14.2 0.0 1.1 8.9 0.0 2.7 2 0 0 2 2 2 0 CodY helix-turn-helix domain HTH_24 PF13412.6 gi|407464930|ref|YP_006775812.1| - 0.032 13.8 0.3 0.41 10.2 0.0 2.6 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|407464930|ref|YP_006775812.1| - 0.072 13.4 0.0 0.16 12.3 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator LexA_DNA_bind PF01726.16 gi|407464930|ref|YP_006775812.1| - 0.1 12.4 0.1 0.57 10.0 0.0 2.3 2 1 0 2 2 2 0 LexA DNA binding domain Stap_Strp_toxin PF01123.20 gi|407464930|ref|YP_006775812.1| - 0.2 12.5 2.5 2.6 9.0 0.7 2.6 2 0 0 2 2 2 0 Staphylococcal/Streptococcal toxin, OB-fold domain DUF2203 PF09969.9 gi|407464931|ref|YP_006775813.1| - 1.4e-36 125.9 0.1 1.6e-36 125.7 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2203) GCR1_C PF12550.8 gi|407464931|ref|YP_006775813.1| - 0.027 14.8 0.3 0.027 14.8 0.3 2.0 2 0 0 2 2 2 0 Transcriptional activator of glycolytic enzymes Peptidase_M57 PF12388.8 gi|407464931|ref|YP_006775813.1| - 0.077 12.6 0.5 0.088 12.4 0.5 1.1 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Putative_PNPOx PF01243.20 gi|407464933|ref|YP_006775815.1| - 1.5e-10 41.1 0.0 1.9e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|407464933|ref|YP_006775815.1| - 2.5e-07 30.8 0.0 2.9e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|407464933|ref|YP_006775815.1| - 0.00024 20.7 0.0 0.00028 20.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Response_reg PF00072.24 gi|407464934|ref|YP_006775816.1| - 3.6e-17 62.5 0.0 4e-17 62.4 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CNDH2_M PF16869.5 gi|407464934|ref|YP_006775816.1| - 0.23 12.2 0.0 0.28 11.9 0.0 1.1 1 0 0 1 1 1 0 PF16858 HAT PF02184.16 gi|407464935|ref|YP_006775817.1| - 0.2 11.6 0.1 0.33 11.0 0.1 1.4 1 0 0 1 1 1 0 HAT (Half-A-TPR) repeat Response_reg PF00072.24 gi|407464936|ref|YP_006775818.1| - 2.3e-19 69.6 0.5 3.7e-19 68.9 0.5 1.3 1 0 0 1 1 1 1 Response regulator receiver domain NitrOD1 PF18549.1 gi|407464936|ref|YP_006775818.1| - 3.9e-13 49.2 0.4 1e-12 47.8 0.4 1.7 1 0 0 1 1 1 1 Nitrosopumilus output domain 1 CbiK PF06180.11 gi|407464937|ref|YP_006775819.1| - 0.015 14.6 0.3 0.028 13.7 0.2 1.5 2 0 0 2 2 2 0 Cobalt chelatase (CbiK) TrmB PF01978.19 gi|407464937|ref|YP_006775819.1| - 0.023 14.5 0.0 0.047 13.6 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|407464937|ref|YP_006775819.1| - 0.037 13.8 0.0 0.06 13.1 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|407464937|ref|YP_006775819.1| - 0.11 12.6 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain MapZ_EC1 PF18041.1 gi|407464937|ref|YP_006775819.1| - 0.26 11.5 6.1 0.52 10.6 0.0 2.8 3 1 0 3 3 3 0 MapZ extracellular domain 1 Methyltransf_31 PF13847.6 gi|407464939|ref|YP_006775821.1| - 1e-16 61.1 0.0 1.3e-16 60.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407464939|ref|YP_006775821.1| - 7.4e-15 55.4 0.0 1.1e-14 54.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|407464939|ref|YP_006775821.1| - 2.8e-12 47.1 0.0 4.1e-12 46.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|407464939|ref|YP_006775821.1| - 5.8e-12 45.5 0.1 7.5e-12 45.1 0.1 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|407464939|ref|YP_006775821.1| - 8.1e-12 45.7 0.0 1.1e-11 45.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|407464939|ref|YP_006775821.1| - 8.9e-10 38.7 0.0 1.2e-09 38.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 gi|407464939|ref|YP_006775821.1| - 1e-05 25.5 0.0 1.1e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|407464939|ref|YP_006775821.1| - 6.4e-05 22.4 0.1 9e-05 21.9 0.1 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|407464939|ref|YP_006775821.1| - 7.6e-05 22.2 0.0 0.00012 21.5 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|407464939|ref|YP_006775821.1| - 9e-05 22.1 0.0 0.00013 21.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.20 gi|407464939|ref|YP_006775821.1| - 9.6e-05 21.6 0.0 0.00013 21.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_33 PF10017.9 gi|407464939|ref|YP_006775821.1| - 0.00057 19.1 0.0 0.00075 18.7 0.0 1.1 1 0 0 1 1 1 1 Histidine-specific methyltransferase, SAM-dependent NodS PF05401.11 gi|407464939|ref|YP_006775821.1| - 0.0014 18.3 0.0 0.0019 17.8 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_5 PF01795.19 gi|407464939|ref|YP_006775821.1| - 0.0017 17.9 0.0 0.0033 17.0 0.0 1.5 1 1 1 2 2 2 1 MraW methylase family FtsJ PF01728.19 gi|407464939|ref|YP_006775821.1| - 0.0018 18.4 0.0 0.0021 18.2 0.0 1.3 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_32 PF13679.6 gi|407464939|ref|YP_006775821.1| - 0.0025 17.8 0.0 0.0031 17.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|407464939|ref|YP_006775821.1| - 0.0029 17.3 0.0 0.0038 16.9 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Fibrillarin PF01269.17 gi|407464939|ref|YP_006775821.1| - 0.004 16.3 0.0 0.0049 16.0 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Pox_MCEL PF03291.16 gi|407464939|ref|YP_006775821.1| - 0.037 13.1 0.1 0.048 12.8 0.1 1.2 1 0 0 1 1 1 0 mRNA capping enzyme CmcI PF04989.12 gi|407464939|ref|YP_006775821.1| - 0.066 12.9 0.0 0.13 11.9 0.0 1.5 1 1 0 1 1 1 0 Cephalosporin hydroxylase Methyltransf_18 PF12847.7 gi|407464939|ref|YP_006775821.1| - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|407464939|ref|YP_006775821.1| - 0.13 11.8 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Rotamase_3 PF13616.6 gi|407464940|ref|YP_006775822.1| - 2.3e-26 92.6 0.5 3.8e-26 91.9 0.5 1.3 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.21 gi|407464940|ref|YP_006775822.1| - 1e-24 87.3 0.1 1.3e-24 87.0 0.1 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 gi|407464940|ref|YP_006775822.1| - 2.6e-09 38.0 0.0 3e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain NTPase_I-T PF01931.18 gi|407464940|ref|YP_006775822.1| - 0.0008 19.2 0.1 0.0011 18.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF84 dCMP_cyt_deam_1 PF00383.23 gi|407464942|ref|YP_006775824.1| - 3.6e-27 94.2 1.3 4.6e-27 93.9 1.3 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|407464942|ref|YP_006775824.1| - 3.9e-14 52.6 0.1 4.5e-14 52.4 0.1 1.1 1 0 0 1 1 1 1 MafB19-like deaminase DNA_pol_B PF00136.21 gi|407464943|ref|YP_006775825.1| - 1.5e-53 182.1 6.2 2.6e-53 181.4 6.2 1.3 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|407464943|ref|YP_006775825.1| - 1.5e-40 139.4 4.1 2.9e-40 138.5 4.1 1.5 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.6 gi|407464943|ref|YP_006775825.1| - 5.6e-07 29.7 0.7 1.5e-06 28.3 0.7 1.7 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|407464943|ref|YP_006775825.1| - 2.9e-05 23.9 1.4 0.00017 21.4 1.4 2.2 1 1 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB MtN3_slv PF03083.16 gi|407464944|ref|YP_006775826.1| - 4.7e-09 36.2 3.7 5.6e-09 35.9 3.7 1.1 1 0 0 1 1 1 1 Sugar efflux transporter for intercellular exchange PQ-loop PF04193.14 gi|407464944|ref|YP_006775826.1| - 0.00034 20.3 3.1 0.00056 19.6 3.1 1.4 1 0 0 1 1 1 1 PQ loop repeat LAB_N PF07578.11 gi|407464944|ref|YP_006775826.1| - 0.002 18.2 2.8 0.0025 17.8 2.8 1.1 1 0 0 1 1 1 1 Lipid A Biosynthesis N-terminal domain RVT_2 PF07727.14 gi|407464944|ref|YP_006775826.1| - 0.095 12.3 2.3 0.35 10.5 2.2 1.7 1 1 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) ABC2_membrane_3 PF12698.7 gi|407464944|ref|YP_006775826.1| - 0.46 9.5 7.9 0.54 9.3 7.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Imp-YgjV PF10688.9 gi|407464944|ref|YP_006775826.1| - 1.2 8.9 9.1 4.4 7.1 9.1 1.8 1 1 0 1 1 1 0 Bacterial inner membrane protein DUF3784 PF12650.7 gi|407464944|ref|YP_006775826.1| - 5.9 7.2 13.5 44 4.4 13.5 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF3784) TIM PF00121.18 gi|407464945|ref|YP_006775827.1| - 1.1e-10 41.3 3.2 6.6e-10 38.8 0.4 2.0 1 1 1 2 2 2 2 Triosephosphate isomerase ThiG PF05690.14 gi|407464945|ref|YP_006775827.1| - 0.00016 21.1 0.2 0.00026 20.4 0.2 1.3 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.18 gi|407464945|ref|YP_006775827.1| - 0.0032 16.5 0.1 0.0052 15.8 0.1 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|407464945|ref|YP_006775827.1| - 0.0053 16.2 0.0 0.0074 15.7 0.0 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase IGPS PF00218.21 gi|407464945|ref|YP_006775827.1| - 0.017 14.3 0.1 0.031 13.5 0.1 1.5 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 gi|407464945|ref|YP_006775827.1| - 0.036 13.5 0.2 0.073 12.5 0.2 1.5 1 0 0 1 1 1 0 Histidine biosynthesis protein TFIIE_alpha PF02002.17 gi|407464945|ref|YP_006775827.1| - 0.15 11.9 2.5 0.11 12.4 0.4 2.0 2 1 0 2 2 2 0 TFIIE alpha subunit DUF3295 PF11702.8 gi|407464945|ref|YP_006775827.1| - 0.24 10.7 0.1 0.29 10.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) PEP-utilizers_C PF02896.18 gi|407464946|ref|YP_006775828.1| - 3.8e-86 288.8 1.2 5.2e-86 288.4 0.4 1.6 2 0 0 2 2 2 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 gi|407464946|ref|YP_006775828.1| - 1.4e-58 198.7 0.3 1.4e-43 149.5 0.0 3.5 2 1 1 3 3 3 2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|407464946|ref|YP_006775828.1| - 2.9e-26 91.0 0.1 8.3e-26 89.5 0.1 1.9 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain HTH_3 PF01381.22 gi|407464947|ref|YP_006775829.1| - 5.3e-15 55.2 0.6 1e-14 54.3 0.6 1.4 1 0 0 1 1 1 1 Helix-turn-helix CBS PF00571.28 gi|407464947|ref|YP_006775829.1| - 1.9e-14 53.8 0.9 9.5e-11 42.0 0.1 2.3 2 0 0 2 2 2 2 CBS domain HTH_19 PF12844.7 gi|407464947|ref|YP_006775829.1| - 9.8e-10 38.3 0.1 1.9e-09 37.4 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|407464947|ref|YP_006775829.1| - 1.1e-06 28.8 0.0 2e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|407464947|ref|YP_006775829.1| - 0.0022 18.1 0.0 0.0048 17.0 0.0 1.5 2 0 0 2 2 2 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_25 PF13413.6 gi|407464947|ref|YP_006775829.1| - 0.0023 17.7 0.0 0.0042 16.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|407464947|ref|YP_006775829.1| - 0.018 15.0 0.5 0.042 13.8 0.2 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|407464947|ref|YP_006775829.1| - 0.032 14.1 0.0 0.062 13.2 0.0 1.5 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_24 PF13412.6 gi|407464947|ref|YP_006775829.1| - 0.063 12.9 0.1 0.18 11.4 0.1 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 gi|407464947|ref|YP_006775829.1| - 0.068 13.6 0.1 0.12 12.8 0.1 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.16 gi|407464947|ref|YP_006775829.1| - 0.077 12.5 0.2 0.17 11.4 0.2 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 Glyoxalase_4 PF13669.6 gi|407464949|ref|YP_006775831.1| - 7.5e-23 80.9 0.0 8.7e-23 80.7 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.25 gi|407464949|ref|YP_006775831.1| - 5.8e-14 52.4 0.0 6.2e-14 52.3 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|407464949|ref|YP_006775831.1| - 6.6e-10 39.4 0.0 6.9e-10 39.3 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 gi|407464949|ref|YP_006775831.1| - 0.0009 20.0 0.0 0.0011 19.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain TPR_10 PF13374.6 gi|407464949|ref|YP_006775831.1| - 0.14 12.1 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Usp PF00582.26 gi|407464950|ref|YP_006775832.1| - 1.3e-18 67.9 0.0 1.4e-18 67.8 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family KdgM PF06178.13 gi|407464950|ref|YP_006775832.1| - 0.044 13.4 0.0 0.053 13.1 0.0 1.1 1 0 0 1 1 1 0 Oligogalacturonate-specific porin protein (KdgM) CvfB_WH PF17783.1 gi|407464950|ref|YP_006775832.1| - 0.76 9.6 4.1 0.37 10.6 0.9 2.1 2 1 0 2 2 2 0 CvfB-like winged helix domain Usp PF00582.26 gi|407464951|ref|YP_006775833.1| - 1.2e-27 97.2 0.4 1.4e-27 96.9 0.4 1.1 1 0 0 1 1 1 1 Universal stress protein family DUF2099 PF09872.9 gi|407464951|ref|YP_006775833.1| - 0.0046 16.2 0.5 0.0065 15.7 0.5 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) DUF45 PF01863.17 gi|407464952|ref|YP_006775834.1| - 0.0038 17.3 0.7 0.0045 17.1 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF45 Nuf2 PF03800.14 gi|407464952|ref|YP_006775834.1| - 0.028 14.5 0.0 0.041 14.0 0.0 1.3 1 0 0 1 1 1 0 Nuf2 family SprT-like PF10263.9 gi|407464952|ref|YP_006775834.1| - 0.039 13.8 0.2 0.056 13.3 0.2 1.4 1 1 0 1 1 1 0 SprT-like family Methyltransf_31 PF13847.6 gi|407464953|ref|YP_006775835.1| - 0.00068 19.4 0.2 0.0034 17.2 0.3 1.9 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|407464953|ref|YP_006775835.1| - 0.00086 19.2 0.0 0.0024 17.7 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|407464953|ref|YP_006775835.1| - 0.0028 18.4 0.0 0.017 15.8 0.0 2.1 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407464953|ref|YP_006775835.1| - 0.011 16.5 0.0 0.058 14.1 0.0 2.2 3 0 0 3 3 3 0 Methyltransferase domain MM_CoA_mutase PF01642.22 gi|407464954|ref|YP_006775836.1| - 2.6e-214 712.5 0.5 2.9e-214 712.4 0.5 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase HigB_toxin PF09907.9 gi|407464954|ref|YP_006775836.1| - 0.14 12.4 0.0 0.35 11.1 0.0 1.7 1 0 0 1 1 1 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system MeaB PF03308.16 gi|407464955|ref|YP_006775837.1| - 3.9e-72 242.5 3.7 5e-72 242.1 3.7 1.1 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|407464955|ref|YP_006775837.1| - 9.1e-07 28.6 0.3 3.1e-06 26.9 0.1 2.0 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.17 gi|407464955|ref|YP_006775837.1| - 9.8e-06 25.5 0.2 0.0076 16.0 0.1 2.4 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein RsgA_GTPase PF03193.16 gi|407464955|ref|YP_006775837.1| - 0.00039 20.4 0.3 0.0067 16.3 0.1 2.6 2 1 0 2 2 2 1 RsgA GTPase AAA_30 PF13604.6 gi|407464955|ref|YP_006775837.1| - 0.0027 17.5 0.3 0.0047 16.7 0.3 1.5 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|407464955|ref|YP_006775837.1| - 0.0061 17.1 8.1 0.4 11.2 1.1 2.4 2 1 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|407464955|ref|YP_006775837.1| - 0.0095 15.9 0.9 0.092 12.6 0.0 2.2 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea Endotoxin_N PF03945.14 gi|407464955|ref|YP_006775837.1| - 0.01 15.5 1.6 0.016 15.0 1.6 1.2 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain NB-ARC PF00931.22 gi|407464955|ref|YP_006775837.1| - 0.011 14.9 0.6 0.033 13.4 0.1 1.8 2 0 0 2 2 2 0 NB-ARC domain ABC_tran PF00005.27 gi|407464955|ref|YP_006775837.1| - 0.011 16.2 1.0 0.041 14.4 0.1 2.2 2 0 0 2 2 2 0 ABC transporter AAA_16 PF13191.6 gi|407464955|ref|YP_006775837.1| - 0.014 15.8 0.1 0.024 15.0 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 gi|407464955|ref|YP_006775837.1| - 0.019 14.7 0.9 0.2 11.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain KAP_NTPase PF07693.14 gi|407464955|ref|YP_006775837.1| - 0.02 14.1 3.4 0.034 13.4 2.5 2.0 1 1 1 2 2 2 0 KAP family P-loop domain MMR_HSR1 PF01926.23 gi|407464955|ref|YP_006775837.1| - 0.02 14.9 2.4 0.03 14.4 0.5 2.2 1 1 0 2 2 2 0 50S ribosome-binding GTPase Ubiq_cyt_C_chap PF03981.12 gi|407464955|ref|YP_006775837.1| - 0.026 14.6 0.3 0.057 13.5 0.3 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone PRK PF00485.18 gi|407464955|ref|YP_006775837.1| - 0.031 14.0 1.3 0.048 13.4 0.3 1.8 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_19 PF13245.6 gi|407464955|ref|YP_006775837.1| - 0.05 13.9 0.8 0.095 13.0 0.8 1.9 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|407464955|ref|YP_006775837.1| - 0.073 12.8 0.2 0.17 11.6 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|407464955|ref|YP_006775837.1| - 0.11 13.0 0.7 0.52 10.9 0.0 2.3 2 1 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|407464955|ref|YP_006775837.1| - 0.2 11.9 0.6 0.78 10.0 0.1 2.1 2 2 0 2 2 2 0 AAA domain Tetraspanin PF00335.20 gi|407464958|ref|YP_006775840.1| - 0.0039 16.9 0.5 0.0043 16.8 0.5 1.0 1 0 0 1 1 1 1 Tetraspanin family DUF3185 PF11381.8 gi|407464958|ref|YP_006775840.1| - 0.016 15.2 1.5 0.074 13.1 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) Nucleos_tra2_C PF07662.13 gi|407464958|ref|YP_006775840.1| - 0.028 14.2 1.6 0.033 14.0 1.6 1.0 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus Peptidase_M73 PF12389.8 gi|407464958|ref|YP_006775840.1| - 0.11 12.4 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Camelysin metallo-endopeptidase FtsH_ext PF06480.15 gi|407464958|ref|YP_006775840.1| - 0.34 11.3 1.5 0.45 10.9 1.5 1.4 1 1 0 1 1 1 0 FtsH Extracellular Peptidase_M1 PF01433.20 gi|407464960|ref|YP_006775842.1| - 9.2e-90 300.0 0.7 1.6e-89 299.2 0.7 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain ERAP1_C PF11838.8 gi|407464960|ref|YP_006775842.1| - 4.7e-60 203.8 0.3 1.8e-59 201.9 0.1 1.9 2 0 0 2 2 2 1 ERAP1-like C-terminal domain Peptidase_M1_N PF17900.1 gi|407464960|ref|YP_006775842.1| - 3.1e-53 180.7 1.8 5.2e-53 180.0 1.8 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Aminopep PF10023.9 gi|407464960|ref|YP_006775842.1| - 0.013 14.8 0.1 0.032 13.6 0.1 1.6 1 0 0 1 1 1 0 Putative aminopeptidase CopG_antitoxin PF12441.8 gi|407464961|ref|YP_006775843.1| - 0.0009 19.7 0.2 0.0024 18.4 0.2 1.7 1 0 0 1 1 1 1 CopG antitoxin of type II toxin-antitoxin system DUF5101 PF17031.5 gi|407464961|ref|YP_006775843.1| - 0.12 12.5 1.9 0.12 12.4 0.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF5101) HTH_20 PF12840.7 gi|407464962|ref|YP_006775844.1| - 0.0012 18.8 0.0 0.0017 18.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|407464962|ref|YP_006775844.1| - 0.007 16.2 0.0 0.01 15.6 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain FUR PF01475.19 gi|407464962|ref|YP_006775844.1| - 0.014 15.5 0.1 0.019 15.1 0.1 1.3 1 1 0 1 1 1 0 Ferric uptake regulator family TrmB PF01978.19 gi|407464962|ref|YP_006775844.1| - 0.087 12.7 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB TFIIB PF00382.19 gi|407464963|ref|YP_006775845.1| - 4.1e-32 110.0 5.9 1.8e-16 59.9 0.6 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|407464963|ref|YP_006775845.1| - 2.2e-10 39.9 1.5 3.5e-10 39.2 1.5 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.23 gi|407464963|ref|YP_006775845.1| - 0.0001 22.1 0.4 0.017 14.8 0.1 2.1 2 0 0 2 2 2 1 Cyclin, N-terminal domain HTH_AsnC-type PF13404.6 gi|407464963|ref|YP_006775845.1| - 0.0012 18.7 0.3 0.0085 15.9 0.0 2.5 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|407464963|ref|YP_006775845.1| - 0.0034 17.3 1.0 0.1 12.6 0.0 2.6 2 0 0 2 2 2 1 HTH domain HTH_3 PF01381.22 gi|407464963|ref|YP_006775845.1| - 0.013 15.6 0.1 0.12 12.4 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix RB_B PF01857.20 gi|407464963|ref|YP_006775845.1| - 0.015 15.3 0.2 0.038 14.0 0.2 1.7 1 1 0 1 1 1 0 Retinoblastoma-associated protein B domain HTH_Crp_2 PF13545.6 gi|407464963|ref|YP_006775845.1| - 0.016 15.1 0.1 0.26 11.3 0.0 2.3 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain zinc_ribbon_2 PF13240.6 gi|407464963|ref|YP_006775845.1| - 0.028 14.1 3.3 0.5 10.1 0.4 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_L37e PF01907.19 gi|407464963|ref|YP_006775845.1| - 0.034 14.3 0.2 0.091 12.9 0.2 1.7 1 0 0 1 1 1 0 Ribosomal protein L37e Sigma70_r4 PF04545.16 gi|407464963|ref|YP_006775845.1| - 0.048 13.2 0.0 4.9 6.8 0.0 2.7 2 0 0 2 2 2 0 Sigma-70, region 4 DZR PF12773.7 gi|407464963|ref|YP_006775845.1| - 0.049 13.6 0.4 0.11 12.5 0.4 1.5 1 0 0 1 1 1 0 Double zinc ribbon Rrf2 PF02082.20 gi|407464963|ref|YP_006775845.1| - 0.08 13.3 1.8 16 5.9 0.0 3.5 3 1 1 4 4 4 0 Transcriptional regulator Ribosomal_S27 PF01599.19 gi|407464963|ref|YP_006775845.1| - 0.089 13.0 0.6 0.21 11.8 0.6 1.7 1 0 0 1 1 1 0 Ribosomal protein S27a LacI PF00356.21 gi|407464963|ref|YP_006775845.1| - 0.12 12.2 5.6 5.2 6.9 0.2 3.4 3 0 0 3 3 3 0 Bacterial regulatory proteins, lacI family Cyclin_C PF02984.19 gi|407464963|ref|YP_006775845.1| - 0.12 12.4 0.2 5.3 7.1 0.1 2.2 1 1 1 2 2 2 0 Cyclin, C-terminal domain HTH_31 PF13560.6 gi|407464963|ref|YP_006775845.1| - 0.13 12.6 0.1 1.8 9.0 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|407464963|ref|YP_006775845.1| - 0.15 11.7 0.3 1.8 8.2 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|407464963|ref|YP_006775845.1| - 0.16 11.6 0.5 0.75 9.5 0.0 2.4 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family zf-ribbon_3 PF13248.6 gi|407464963|ref|YP_006775845.1| - 0.37 10.3 5.4 9.4 5.8 5.1 2.4 1 1 1 2 2 2 0 zinc-ribbon domain DnaJ_CXXCXGXG PF00684.19 gi|407464964|ref|YP_006775846.1| - 0.0018 18.6 8.5 0.0036 17.6 8.5 1.5 1 1 0 1 1 1 1 DnaJ central domain ApbA PF02558.16 gi|407464964|ref|YP_006775846.1| - 0.041 13.5 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Alfin PF12165.8 gi|407464964|ref|YP_006775846.1| - 0.11 12.2 0.1 0.14 11.9 0.1 1.2 1 0 0 1 1 1 0 Alfin DZR PF12773.7 gi|407464964|ref|YP_006775846.1| - 0.48 10.5 10.5 1.8 8.7 2.0 2.3 2 0 0 2 2 2 0 Double zinc ribbon Anti-TRAP PF15777.5 gi|407464964|ref|YP_006775846.1| - 0.59 10.1 7.2 5.9 6.9 0.4 3.0 2 1 1 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-nanos PF05741.13 gi|407464964|ref|YP_006775846.1| - 0.67 10.2 11.3 47 4.3 11.3 2.7 1 1 0 1 1 1 0 Nanos RNA binding domain Zf_RING PF16744.5 gi|407464964|ref|YP_006775846.1| - 0.73 10.0 8.6 1.7 8.8 1.7 2.1 2 0 0 2 2 2 0 KIAA1045 RING finger DUF5351 PF17302.2 gi|407464964|ref|YP_006775846.1| - 1.6 8.9 10.1 3.2 8.0 0.4 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5351) B12-binding PF02310.19 gi|407464965|ref|YP_006775847.1| - 3.7e-22 78.6 0.3 4.3e-22 78.4 0.3 1.1 1 0 0 1 1 1 1 B12 binding domain IMPDH PF00478.25 gi|407464965|ref|YP_006775847.1| - 0.0024 16.9 0.1 0.0029 16.7 0.1 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain LpxI_N PF17930.1 gi|407464965|ref|YP_006775847.1| - 0.086 12.7 0.2 2 8.3 0.0 2.2 1 1 1 2 2 2 0 LpxI N-terminal domain IlvN PF07991.12 gi|407464966|ref|YP_006775848.1| - 1.7e-66 222.9 0.5 2.4e-66 222.4 0.5 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|407464966|ref|YP_006775848.1| - 4.2e-55 186.0 1.9 6.5e-55 185.4 1.9 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 gi|407464966|ref|YP_006775848.1| - 2.4e-06 27.0 0.1 4.3e-06 26.2 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|407464966|ref|YP_006775848.1| - 0.00042 20.5 0.4 0.0028 17.8 0.1 2.3 2 1 1 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|407464966|ref|YP_006775848.1| - 0.0014 19.2 0.2 0.0034 17.9 0.2 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 gi|407464966|ref|YP_006775848.1| - 0.0062 16.6 0.2 0.012 15.7 0.2 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NTP_transf_2 PF01909.23 gi|407464967|ref|YP_006775849.1| - 1.8e-07 31.4 0.0 4.7e-07 30.0 0.0 1.7 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|407464967|ref|YP_006775849.1| - 1.5e-06 28.2 0.8 0.0001 22.3 0.0 2.8 2 1 1 3 3 3 2 Polymerase beta, Nucleotidyltransferase SNase PF00565.17 gi|407464968|ref|YP_006775850.1| - 4.3e-07 30.4 0.0 7.2e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Staphylococcal nuclease homologue Frag1 PF10277.9 gi|407464968|ref|YP_006775850.1| - 0.1 12.1 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family GTP_EFTU_D2 PF03144.25 gi|407464969|ref|YP_006775851.1| - 2e-08 34.5 1.8 2.3e-08 34.3 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 DUF726 PF05277.12 gi|407464970|ref|YP_006775852.1| - 5e-12 45.4 0.0 9.2e-12 44.5 0.0 1.3 2 0 0 2 2 2 1 Protein of unknown function (DUF726) DUF900 PF05990.12 gi|407464970|ref|YP_006775852.1| - 2e-09 37.3 0.0 2.9e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) DUF676 PF05057.14 gi|407464970|ref|YP_006775852.1| - 0.0005 19.7 0.3 0.0016 18.0 0.3 1.9 1 1 0 1 1 1 1 Putative serine esterase (DUF676) LIDHydrolase PF10230.9 gi|407464970|ref|YP_006775852.1| - 0.00063 19.4 0.1 0.001 18.7 0.1 1.3 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase Hydrolase_4 PF12146.8 gi|407464970|ref|YP_006775852.1| - 0.00066 19.0 0.0 0.00096 18.5 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Cutinase PF01083.22 gi|407464970|ref|YP_006775852.1| - 0.00083 19.4 0.0 0.0013 18.7 0.0 1.3 1 0 0 1 1 1 1 Cutinase LCAT PF02450.15 gi|407464970|ref|YP_006775852.1| - 0.0013 18.0 0.0 0.0018 17.5 0.0 1.2 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase DUF1749 PF08538.10 gi|407464970|ref|YP_006775852.1| - 0.0035 16.5 0.0 0.0049 16.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1749) Abhydrolase_8 PF06259.12 gi|407464970|ref|YP_006775852.1| - 0.011 15.4 0.0 0.021 14.5 0.0 1.6 1 1 0 1 1 1 0 Alpha/beta hydrolase Lipase_3 PF01764.25 gi|407464970|ref|YP_006775852.1| - 0.016 15.1 0.0 0.018 14.9 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_2 PF02230.16 gi|407464970|ref|YP_006775852.1| - 0.05 13.4 0.2 0.074 12.8 0.2 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase VirJ PF06057.11 gi|407464970|ref|YP_006775852.1| - 0.17 11.8 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial virulence protein (VirJ) tRNA-synt_1g PF09334.11 gi|407464971|ref|YP_006775853.1| - 3.1e-139 464.1 0.7 4.3e-139 463.6 0.7 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|407464971|ref|YP_006775853.1| - 5e-17 61.4 0.3 2.9e-06 25.9 0.1 4.1 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 gi|407464971|ref|YP_006775853.1| - 1.1e-13 51.3 0.3 4e-07 29.7 0.1 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 gi|407464971|ref|YP_006775853.1| - 4e-09 36.6 0.0 7e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 gi|407464971|ref|YP_006775853.1| - 2.1e-05 23.6 0.1 0.00094 18.2 0.0 2.9 3 0 0 3 3 3 1 tRNA synthetases class I (K) FhuF PF06276.12 gi|407464971|ref|YP_006775853.1| - 0.16 12.4 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 Ferric iron reductase FhuF-like transporter PolC_DP2 PF03833.13 gi|407464971|ref|YP_006775853.1| - 0.37 8.6 0.5 0.5 8.2 0.5 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-Di19 PF05605.12 gi|407464971|ref|YP_006775853.1| - 0.67 10.3 3.1 1.4 9.2 3.1 1.5 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-CHY PF05495.12 gi|407464971|ref|YP_006775853.1| - 0.68 10.5 3.4 1.3 9.5 3.4 1.5 1 0 0 1 1 1 0 CHY zinc finger DZR PF12773.7 gi|407464971|ref|YP_006775853.1| - 1.2 9.2 6.6 2.7 8.1 6.6 1.6 1 0 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|407464971|ref|YP_006775853.1| - 4.4 6.9 6.3 2.5 7.7 3.9 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding AdoHcyase_NAD PF00670.21 gi|407464972|ref|YP_006775854.1| - 1.9e-51 174.4 1.7 1.9e-51 174.4 1.7 2.5 3 0 0 3 3 3 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AdoHcyase PF05221.17 gi|407464972|ref|YP_006775854.1| - 2.1e-51 174.8 0.0 1.2e-24 87.0 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase 2-Hacid_dh_C PF02826.19 gi|407464972|ref|YP_006775854.1| - 1.1e-09 37.9 0.7 2.2e-09 36.9 0.3 1.7 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|407464972|ref|YP_006775854.1| - 5.7e-07 29.2 0.2 1.2e-06 28.1 0.2 1.6 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 gi|407464972|ref|YP_006775854.1| - 0.0016 18.7 0.0 0.0081 16.4 0.1 2.1 2 0 0 2 2 2 1 TrkA-N domain F420_oxidored PF03807.17 gi|407464972|ref|YP_006775854.1| - 0.023 15.3 0.1 0.06 13.9 0.1 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 gi|407464972|ref|YP_006775854.1| - 0.031 13.6 4.3 0.35 10.1 4.3 2.4 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DUF364 PF04016.12 gi|407464972|ref|YP_006775854.1| - 0.064 12.8 0.0 0.2 11.2 0.0 1.8 2 0 0 2 2 2 0 Putative heavy-metal chelation 3HCDH_N PF02737.18 gi|407464972|ref|YP_006775854.1| - 0.067 13.1 0.6 0.067 13.1 0.6 2.3 3 1 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rieske PF00355.26 gi|407464973|ref|YP_006775855.1| - 3.4e-14 52.5 0.0 3.8e-14 52.4 0.0 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|407464973|ref|YP_006775855.1| - 9e-12 44.8 0.0 1e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Thioredoxin_8 PF13905.6 gi|407464974|ref|YP_006775856.1| - 0.11 12.9 0.0 0.19 12.1 0.0 1.5 1 1 0 1 1 1 0 Thioredoxin-like NAD_synthase PF02540.17 gi|407464975|ref|YP_006775857.1| - 3.4e-77 258.8 0.4 4e-77 258.6 0.4 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|407464975|ref|YP_006775857.1| - 0.0011 17.8 0.0 0.037 12.8 0.0 2.2 2 0 0 2 2 2 1 tRNA methyl transferase QueC PF06508.13 gi|407464975|ref|YP_006775857.1| - 0.0057 16.2 0.0 0.043 13.3 0.0 2.1 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|407464975|ref|YP_006775857.1| - 0.013 15.3 0.0 0.02 14.6 0.0 1.4 1 0 0 1 1 1 0 PP-loop family DNA_pol_B_exo2 PF10108.9 gi|407464975|ref|YP_006775857.1| - 0.013 15.2 1.4 0.043 13.5 0.1 1.9 2 0 0 2 2 2 0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB ThiI PF02568.14 gi|407464975|ref|YP_006775857.1| - 0.014 14.9 0.0 0.29 10.7 0.0 2.3 2 0 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 gi|407464975|ref|YP_006775857.1| - 0.017 14.8 0.0 0.042 13.5 0.0 1.6 2 0 0 2 2 2 0 Asparagine synthase Ribosomal_S13 PF00416.22 gi|407464975|ref|YP_006775857.1| - 0.064 13.7 1.1 2.9 8.3 0.1 2.5 2 0 0 2 2 2 0 Ribosomal protein S13/S18 HTH_25 PF13413.6 gi|407464975|ref|YP_006775857.1| - 0.064 13.1 0.7 1.8 8.5 0.2 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain Phage_terminase PF10668.9 gi|407464975|ref|YP_006775857.1| - 0.094 12.7 0.0 0.33 11.0 0.0 2.0 1 0 0 1 1 1 0 Phage terminase small subunit Bac_globin PF01152.21 gi|407464975|ref|YP_006775857.1| - 0.14 12.3 0.0 0.49 10.5 0.0 1.8 2 0 0 2 2 2 0 Bacterial-like globin IF2_N PF04760.15 gi|407464975|ref|YP_006775857.1| - 0.18 11.7 2.1 6.1 6.7 0.1 2.7 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region CPSase_L_D3 PF02787.19 gi|407464975|ref|YP_006775857.1| - 0.18 12.1 1.9 5.2 7.5 0.2 2.9 2 1 1 3 3 3 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Orthopox_B11R PF07033.11 gi|407464975|ref|YP_006775857.1| - 0.21 11.4 9.5 4.3 7.2 0.1 2.9 3 1 0 3 3 3 0 Orthopoxvirus B11R protein tRNA-synt_1e PF01406.19 gi|407464976|ref|YP_006775858.1| - 1.7e-127 424.9 1.2 1.7e-127 424.9 1.2 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|407464976|ref|YP_006775858.1| - 8.1e-13 47.9 0.4 1.5e-07 30.6 0.3 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.11 gi|407464976|ref|YP_006775858.1| - 5.1e-12 46.1 0.5 5.1e-12 46.1 0.5 2.2 2 0 0 2 2 2 1 DALR domain tRNA-synt_1 PF00133.22 gi|407464976|ref|YP_006775858.1| - 1.1e-08 33.8 0.0 7.9e-07 27.7 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 gi|407464976|ref|YP_006775858.1| - 2.5e-06 26.7 1.6 0.015 14.3 0.0 2.5 3 0 0 3 3 3 2 tRNA synthetases class I (K) YolD PF08863.10 gi|407464976|ref|YP_006775858.1| - 0.16 12.1 6.0 0.2 11.7 3.1 2.7 2 0 0 2 2 2 0 YolD-like protein Band_7 PF01145.25 gi|407464976|ref|YP_006775858.1| - 1.9 8.4 6.7 1.5 8.8 3.2 2.4 2 1 1 3 3 3 0 SPFH domain / Band 7 family Pyr_excise PF03013.14 gi|407464978|ref|YP_006775860.1| - 2.4e-12 47.0 0.4 4.2e-12 46.2 0.4 1.3 1 1 0 1 1 1 1 Pyrimidine dimer DNA glycosylase Putative_PNPOx PF01243.20 gi|407464979|ref|YP_006775861.1| - 0.00035 20.7 0.0 0.00048 20.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|407464979|ref|YP_006775861.1| - 0.0023 17.9 0.0 0.0033 17.4 0.0 1.3 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HTH_5 PF01022.20 gi|407464979|ref|YP_006775861.1| - 0.13 12.1 0.0 2 8.4 0.0 2.4 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family PRIMA1 PF16101.5 gi|407464980|ref|YP_006775862.1| - 0.31 11.1 0.8 0.52 10.4 0.8 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Sigma_reg_N PF13800.6 gi|407464980|ref|YP_006775862.1| - 4.7 7.6 8.4 23 5.3 4.8 2.5 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Insulin_TMD PF17870.1 gi|407464981|ref|YP_006775863.1| - 1.5 8.9 5.7 2.9 8.0 0.4 2.3 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment MS_channel PF00924.18 gi|407464982|ref|YP_006775864.1| - 8e-47 159.4 2.1 1.1e-46 159.0 2.1 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF432 PF04254.13 gi|407464983|ref|YP_006775865.1| - 2.2e-31 108.6 0.0 5.7e-31 107.3 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF432) EF-hand_1 PF00036.32 gi|407464984|ref|YP_006775866.1| - 0.19 11.3 1.9 13 5.6 0.0 3.0 3 0 0 3 3 3 0 EF hand DUF1722 PF08349.11 gi|407464985|ref|YP_006775867.1| - 9e-34 116.3 3.5 1.4e-33 115.7 3.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) DUF2974 PF11187.8 gi|407464985|ref|YP_006775867.1| - 0.0072 15.9 2.4 0.0099 15.4 2.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) DUF577 PF04510.12 gi|407464985|ref|YP_006775867.1| - 0.025 14.5 3.6 0.06 13.2 3.1 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF577) GAGA_bind PF06217.12 gi|407464985|ref|YP_006775867.1| - 2.2 8.5 5.2 2.6 8.2 5.2 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Nre_N PF04894.12 gi|407464986|ref|YP_006775868.1| - 2.4e-90 303.0 0.0 3.3e-90 302.6 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|407464986|ref|YP_006775868.1| - 4.1e-33 113.6 0.0 6.3e-33 113.0 0.0 1.3 1 0 0 1 1 1 1 Archaeal Nre, C-terminal HTH_7 PF02796.15 gi|407464986|ref|YP_006775868.1| - 0.12 12.5 0.0 0.3 11.2 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Peripla_BP_2 PF01497.18 gi|407464987|ref|YP_006775869.1| - 5.2e-22 78.6 0.0 9.6e-22 77.7 0.0 1.4 1 1 0 1 1 1 1 Periplasmic binding protein Methyltransf_31 PF13847.6 gi|407464987|ref|YP_006775869.1| - 0.027 14.3 0.7 0.055 13.3 0.7 1.5 1 0 0 1 1 1 0 Methyltransferase domain NAD_binding_10 PF13460.6 gi|407464988|ref|YP_006775870.1| - 4.7e-14 52.7 0.0 7e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|407464988|ref|YP_006775870.1| - 3.2e-12 46.4 0.1 4.9e-12 45.8 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|407464988|ref|YP_006775870.1| - 7.7e-10 38.2 0.1 1.8e-09 37.0 0.1 1.6 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NmrA PF05368.13 gi|407464988|ref|YP_006775870.1| - 3.6e-08 33.3 0.0 5.9e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family GDP_Man_Dehyd PF16363.5 gi|407464988|ref|YP_006775870.1| - 4.7e-06 26.2 0.0 7.8e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|407464988|ref|YP_006775870.1| - 0.00091 18.4 0.0 0.0017 17.5 0.0 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain PAC2 PF09754.9 gi|407464988|ref|YP_006775870.1| - 0.14 12.2 0.0 0.3 11.1 0.0 1.5 2 0 0 2 2 2 0 PAC2 family NAD_binding_4 PF07993.12 gi|407464988|ref|YP_006775870.1| - 0.17 11.0 0.0 0.35 10.0 0.0 1.5 1 0 0 1 1 1 0 Male sterility protein ABC_trans_CmpB PF06541.11 gi|407464989|ref|YP_006775871.1| - 0.014 15.6 0.1 0.014 15.6 0.1 1.1 1 0 0 1 1 1 0 Putative ABC-transporter type IV Phage_CI_repr PF07022.13 gi|407464989|ref|YP_006775871.1| - 0.092 12.9 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain B12-binding PF02310.19 gi|407464990|ref|YP_006775872.1| - 4.4e-14 52.5 0.0 7.2e-14 51.9 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|407464990|ref|YP_006775872.1| - 5e-08 33.3 0.0 8.7e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain Response_reg PF00072.24 gi|407464990|ref|YP_006775872.1| - 0.0024 18.0 0.1 0.0077 16.4 0.0 1.9 2 0 0 2 2 2 1 Response regulator receiver domain IPPT PF01715.17 gi|407464990|ref|YP_006775872.1| - 0.0026 17.6 0.1 0.21 11.4 0.0 2.1 2 0 0 2 2 2 2 IPP transferase DNA_pol3_delta PF06144.13 gi|407464990|ref|YP_006775872.1| - 0.03 14.1 0.6 1.1 9.0 0.0 2.5 2 1 0 2 2 2 0 DNA polymerase III, delta subunit TFIIB PF00382.19 gi|407464992|ref|YP_006775874.1| - 7.6e-24 83.6 5.8 2.3e-13 50.0 0.1 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat Cyclin_C PF02984.19 gi|407464992|ref|YP_006775874.1| - 4.3e-06 26.8 0.0 4e-05 23.7 0.0 2.1 2 0 0 2 2 2 1 Cyclin, C-terminal domain TF_Zn_Ribbon PF08271.12 gi|407464992|ref|YP_006775874.1| - 2.2e-05 23.9 0.4 4.1e-05 23.0 0.4 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.23 gi|407464992|ref|YP_006775874.1| - 0.00061 19.5 1.8 0.3 10.8 0.2 2.2 2 0 0 2 2 2 2 Cyclin, N-terminal domain Rrf2 PF02082.20 gi|407464992|ref|YP_006775874.1| - 0.0011 19.2 0.8 1.8 9.0 0.0 2.7 2 0 0 2 2 2 2 Transcriptional regulator RB_B PF01857.20 gi|407464992|ref|YP_006775874.1| - 0.0029 17.6 0.4 0.0075 16.3 0.0 1.8 2 1 0 2 2 2 1 Retinoblastoma-associated protein B domain HHH_5 PF14520.6 gi|407464992|ref|YP_006775874.1| - 0.011 16.3 1.1 2.1 9.0 0.3 3.8 4 0 0 4 4 4 0 Helix-hairpin-helix domain Sigma70_r4 PF04545.16 gi|407464992|ref|YP_006775874.1| - 0.023 14.2 0.1 0.91 9.1 0.1 2.4 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_3 PF01381.22 gi|407464992|ref|YP_006775874.1| - 0.03 14.4 0.7 0.26 11.4 0.2 2.4 2 0 0 2 2 2 0 Helix-turn-helix HTH_10 PF04967.12 gi|407464992|ref|YP_006775874.1| - 0.095 12.5 0.2 5 7.0 0.2 2.7 2 0 0 2 2 2 0 HTH DNA binding domain zf-FCS PF06467.14 gi|407464993|ref|YP_006775875.1| - 0.15 12.0 9.4 0.64 10.0 0.3 2.6 2 1 1 3 3 3 0 MYM-type Zinc finger with FCS sequence motif MMR_HSR1_C PF08438.10 gi|407464994|ref|YP_006775876.1| - 5.5e-31 107.4 0.1 1.4e-30 106.1 0.1 1.7 2 0 0 2 2 2 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|407464994|ref|YP_006775876.1| - 9.5e-20 70.8 0.0 9.5e-19 67.6 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 gi|407464994|ref|YP_006775876.1| - 1.8e-07 31.1 0.0 3.4e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|407464994|ref|YP_006775876.1| - 5.6e-06 26.0 0.0 0.00029 20.4 0.0 2.7 3 0 0 3 3 3 1 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|407464994|ref|YP_006775876.1| - 0.0005 20.2 0.5 0.17 12.0 0.0 3.1 1 1 2 4 4 4 1 Dynamin family GTP_EFTU PF00009.27 gi|407464994|ref|YP_006775876.1| - 0.01 15.4 0.9 4.9 6.7 0.2 3.0 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain Syntaxin-6_N PF09177.11 gi|407464995|ref|YP_006775877.1| - 0.21 12.2 1.8 0.31 11.6 1.7 1.5 1 1 0 1 1 1 0 Syntaxin 6, N-terminal CoA_binding_2 PF13380.6 gi|407464996|ref|YP_006775878.1| - 2.7e-41 140.7 0.1 3.2e-41 140.5 0.1 1.0 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|407464996|ref|YP_006775878.1| - 3.1e-08 34.2 0.0 8.8e-08 32.7 0.0 1.6 2 0 0 2 2 2 1 CoA binding domain Glyco_hydro_57 PF03065.15 gi|407464996|ref|YP_006775878.1| - 0.047 12.9 0.0 0.095 11.9 0.0 1.4 2 0 0 2 2 2 0 Glycosyl hydrolase family 57 SpoU_sub_bind PF08032.12 gi|407464996|ref|YP_006775878.1| - 0.097 13.0 0.1 0.66 10.3 0.1 2.1 2 1 1 3 3 3 0 RNA 2'-O ribose methyltransferase substrate binding DUF4423 PF14394.6 gi|407464997|ref|YP_006775879.1| - 1.9e-06 27.7 0.6 2.9e-06 27.1 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HxlR PF01638.17 gi|407464997|ref|YP_006775879.1| - 5.4e-05 23.0 0.8 0.0001 22.1 0.7 1.5 1 1 0 1 1 1 1 HxlR-like helix-turn-helix Rio2_N PF09202.11 gi|407464997|ref|YP_006775879.1| - 0.00018 21.6 0.0 0.00067 19.8 0.0 1.9 2 0 0 2 2 2 1 Rio2, N-terminal TrmB PF01978.19 gi|407464997|ref|YP_006775879.1| - 0.0023 17.8 0.0 0.0036 17.1 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|407464997|ref|YP_006775879.1| - 0.012 15.4 0.3 0.018 14.9 0.3 1.5 1 1 0 1 1 1 0 TFIIE alpha subunit Sulfolobus_pRN PF05584.11 gi|407464997|ref|YP_006775879.1| - 0.017 15.1 0.0 0.029 14.4 0.0 1.3 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein HTH_45 PF14947.6 gi|407464997|ref|YP_006775879.1| - 0.028 14.4 0.7 0.062 13.3 0.7 1.6 1 1 0 1 1 1 0 Winged helix-turn-helix MarR PF01047.22 gi|407464997|ref|YP_006775879.1| - 0.03 14.3 0.1 0.063 13.2 0.1 1.5 1 0 0 1 1 1 0 MarR family DUF2250 PF10007.9 gi|407464997|ref|YP_006775879.1| - 0.03 14.4 1.5 0.041 14.0 0.4 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_34 PF13601.6 gi|407464997|ref|YP_006775879.1| - 0.047 13.9 0.7 0.091 13.0 0.7 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|407464997|ref|YP_006775879.1| - 0.07 13.5 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator DUF4194 PF13835.6 gi|407464997|ref|YP_006775879.1| - 0.14 11.9 0.1 0.29 10.9 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4194) Enkurin PF13864.6 gi|407464997|ref|YP_006775879.1| - 0.37 11.2 7.5 1.2 9.6 2.3 2.1 2 0 0 2 2 2 0 Calmodulin-binding KIP1 PF07765.12 gi|407464997|ref|YP_006775879.1| - 1.1 9.4 5.1 0.45 10.7 1.5 1.9 2 0 0 2 2 2 0 KIP1-like protein BPL_LplA_LipB PF03099.19 gi|407464998|ref|YP_006775880.1| - 1.7e-18 66.8 0.0 3.4e-18 65.8 0.0 1.5 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.12 gi|407464998|ref|YP_006775880.1| - 3.1e-13 49.5 0.1 3.1e-13 49.5 0.1 2.5 3 0 0 3 3 3 1 HTH domain BPL_C PF02237.17 gi|407464998|ref|YP_006775880.1| - 7.5e-06 25.7 1.6 1.5e-05 24.8 1.6 1.5 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain UPF0122 PF04297.14 gi|407464998|ref|YP_006775880.1| - 0.014 15.6 1.2 0.047 13.9 0.1 2.1 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like MarR_2 PF12802.7 gi|407464998|ref|YP_006775880.1| - 0.014 15.2 0.0 0.026 14.4 0.0 1.3 1 0 0 1 1 1 0 MarR family Fe_dep_repress PF01325.19 gi|407464998|ref|YP_006775880.1| - 0.02 15.1 0.6 0.2 11.8 0.0 2.3 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 gi|407464998|ref|YP_006775880.1| - 0.026 14.1 0.0 0.054 13.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|407464998|ref|YP_006775880.1| - 0.062 13.7 0.0 0.17 12.3 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator Lipocalin_7 PF14651.6 gi|407464998|ref|YP_006775880.1| - 0.17 11.8 1.8 0.33 10.9 0.2 2.3 3 0 0 3 3 3 0 Lipocalin / cytosolic fatty-acid binding protein family AATF-Che1 PF13339.6 gi|407464999|ref|YP_006775881.1| - 0.0029 18.3 4.3 0.004 17.8 4.3 1.3 1 1 0 1 1 1 1 Apoptosis antagonizing transcription factor DUF948 PF06103.11 gi|407464999|ref|YP_006775881.1| - 0.13 12.5 0.1 8.2 6.8 0.0 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) TPR_1 PF00515.28 gi|407465000|ref|YP_006775882.1| - 5.9e-11 41.7 0.0 0.0032 17.2 0.0 3.9 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407465000|ref|YP_006775882.1| - 4.4e-08 32.6 0.0 0.003 17.5 0.0 3.3 4 0 0 4 4 3 2 Tetratricopeptide repeat Peptidase_M10 PF00413.24 gi|407465000|ref|YP_006775882.1| - 2e-07 31.0 0.3 4.7e-07 29.8 0.3 1.6 1 1 0 1 1 1 1 Matrixin TPR_8 PF13181.6 gi|407465000|ref|YP_006775882.1| - 1.3e-06 28.1 0.1 0.1 12.8 0.0 3.1 2 0 0 2 2 2 2 Tetratricopeptide repeat Reprolysin_5 PF13688.6 gi|407465000|ref|YP_006775882.1| - 9.3e-05 22.7 0.1 0.00017 21.8 0.1 1.4 1 0 0 1 1 1 1 Metallo-peptidase family M12 Peptidase_M57 PF12388.8 gi|407465000|ref|YP_006775882.1| - 0.00099 18.8 0.1 0.0016 18.1 0.1 1.3 1 0 0 1 1 1 1 Dual-action HEIGH metallo-peptidase TPR_7 PF13176.6 gi|407465000|ref|YP_006775882.1| - 0.0013 18.6 0.0 0.47 10.6 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407465000|ref|YP_006775882.1| - 0.0024 18.1 0.0 2.5 8.4 0.0 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407465000|ref|YP_006775882.1| - 0.0083 16.6 0.0 0.12 12.9 0.0 2.5 3 0 0 3 3 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|407465000|ref|YP_006775882.1| - 0.02 14.9 0.0 4.9 7.3 0.0 3.2 2 1 1 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat Reprolysin PF01421.19 gi|407465000|ref|YP_006775882.1| - 0.026 14.4 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease Reprolysin_3 PF13582.6 gi|407465000|ref|YP_006775882.1| - 0.038 14.5 0.1 0.11 13.0 0.1 1.8 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_2 PF13574.6 gi|407465000|ref|YP_006775882.1| - 0.052 13.4 0.2 0.11 12.4 0.2 1.5 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M54 PF07998.11 gi|407465000|ref|YP_006775882.1| - 0.065 13.2 0.6 0.18 11.8 0.1 2.0 2 0 0 2 2 2 0 Peptidase family M54 ETRAMP PF09716.10 gi|407465000|ref|YP_006775882.1| - 0.068 13.2 0.2 0.16 12.1 0.2 1.6 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) ANAPC3 PF12895.7 gi|407465000|ref|YP_006775882.1| - 0.075 13.3 0.2 0.51 10.6 0.0 2.4 3 0 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 HTH_52 PF18576.1 gi|407465000|ref|YP_006775882.1| - 0.095 12.9 0.3 3.3 8.0 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain TPR_11 PF13414.6 gi|407465000|ref|YP_006775882.1| - 0.1 12.3 0.3 0.54 10.0 0.0 2.3 2 0 0 2 2 2 0 TPR repeat TPR_14 PF13428.6 gi|407465000|ref|YP_006775882.1| - 0.12 13.3 0.0 8.6 7.5 0.0 3.0 1 1 2 3 3 3 0 Tetratricopeptide repeat TFIIB PF00382.19 gi|407465001|ref|YP_006775883.1| - 4.2e-33 113.2 6.1 1.4e-16 60.3 0.2 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|407465001|ref|YP_006775883.1| - 9.6e-14 50.6 0.8 1.7e-13 49.8 0.8 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.23 gi|407465001|ref|YP_006775883.1| - 9.9e-05 22.1 0.6 0.00048 19.9 0.1 2.0 2 0 0 2 2 2 1 Cyclin, N-terminal domain TFIIB_C_1 PF18542.1 gi|407465001|ref|YP_006775883.1| - 0.0021 18.1 0.5 0.006 16.6 0.5 1.7 1 0 0 1 1 1 1 Transcription factor IIB C-terminal module 1 Ribosomal_S27e PF01667.17 gi|407465001|ref|YP_006775883.1| - 0.02 14.6 1.3 0.049 13.3 1.3 1.6 1 0 0 1 1 1 0 Ribosomal protein S27 Zn_Tnp_IS1595 PF12760.7 gi|407465001|ref|YP_006775883.1| - 0.032 14.2 0.2 0.075 13.0 0.2 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Nudix_N_2 PF14803.6 gi|407465001|ref|YP_006775883.1| - 0.033 14.1 0.4 0.77 9.7 0.0 2.5 2 0 0 2 2 2 0 Nudix N-terminal RB_B PF01857.20 gi|407465001|ref|YP_006775883.1| - 0.037 14.1 0.1 0.061 13.4 0.1 1.3 1 0 0 1 1 1 0 Retinoblastoma-associated protein B domain OrfB_Zn_ribbon PF07282.11 gi|407465001|ref|YP_006775883.1| - 0.049 13.6 0.3 0.13 12.2 0.3 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain RPW8 PF05659.11 gi|407465001|ref|YP_006775883.1| - 0.078 12.7 0.2 0.32 10.7 0.0 1.9 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 A2L_zn_ribbon PF08792.10 gi|407465001|ref|YP_006775883.1| - 0.078 12.7 0.6 0.15 11.8 0.6 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain HMG_CoA_synt_C PF08540.10 gi|407465001|ref|YP_006775883.1| - 0.14 11.8 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A synthase C terminal Lar_restr_allev PF14354.6 gi|407465001|ref|YP_006775883.1| - 0.15 12.5 1.7 0.32 11.4 0.5 2.1 2 0 0 2 2 2 0 Restriction alleviation protein Lar HscB_4_cys PF18256.1 gi|407465001|ref|YP_006775883.1| - 0.18 11.6 1.1 0.39 10.6 1.1 1.6 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif zinc_ribbon_2 PF13240.6 gi|407465001|ref|YP_006775883.1| - 0.59 9.9 5.5 5 7.0 0.2 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|407465001|ref|YP_006775883.1| - 0.73 9.3 4.9 13 5.3 5.0 2.3 1 1 0 1 1 1 0 zinc-ribbon domain Pribosyltran PF00156.27 gi|407465002|ref|YP_006775884.1| - 1.4e-07 31.1 0.0 0.0019 17.8 0.0 2.1 1 1 1 2 2 2 2 Phosphoribosyl transferase domain PHA_synth_III_E PF09712.10 gi|407465004|ref|YP_006775886.1| - 6e-14 51.8 0.2 7.3e-14 51.6 0.2 1.2 1 0 0 1 1 1 1 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) GAT PF03127.14 gi|407465004|ref|YP_006775886.1| - 0.003 17.8 3.1 2.2 8.7 0.1 3.2 2 1 1 3 3 3 1 GAT domain Bacillus_HBL PF05791.11 gi|407465004|ref|YP_006775886.1| - 0.0037 17.1 2.4 0.22 11.3 0.2 2.3 2 0 0 2 2 2 2 Bacillus haemolytic enterotoxin (HBL) Cnn_1N PF07989.11 gi|407465004|ref|YP_006775886.1| - 0.0038 17.4 2.3 2.2 8.5 1.9 2.3 2 0 0 2 2 2 2 Centrosomin N-terminal motif 1 DUF4763 PF15960.5 gi|407465004|ref|YP_006775886.1| - 0.0062 15.9 2.4 0.25 10.6 1.2 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4763) DUF2408 PF10303.9 gi|407465004|ref|YP_006775886.1| - 0.01 16.4 1.8 0.017 15.7 1.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) BMFP PF04380.13 gi|407465004|ref|YP_006775886.1| - 0.013 15.9 0.1 0.056 13.9 0.0 1.9 2 0 0 2 2 2 0 Membrane fusogenic activity DUF4200 PF13863.6 gi|407465004|ref|YP_006775886.1| - 0.033 14.6 4.9 0.3 11.5 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) ApoLp-III PF07464.11 gi|407465004|ref|YP_006775886.1| - 0.26 11.4 6.5 3.9 7.5 1.1 2.3 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Lge1 PF11488.8 gi|407465004|ref|YP_006775886.1| - 0.45 10.7 4.8 0.37 11.0 0.8 2.6 2 1 1 3 3 3 0 Transcriptional regulatory protein LGE1 IFP_35_N PF07334.13 gi|407465004|ref|YP_006775886.1| - 0.62 10.2 7.3 2.9 8.0 2.1 2.5 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Hydrolase_4 PF12146.8 gi|407465005|ref|YP_006775887.1| - 6e-14 51.9 0.0 1.2e-12 47.6 0.0 2.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|407465005|ref|YP_006775887.1| - 1.3e-13 51.3 0.0 2.8e-13 50.1 0.0 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold PhaC_N PF07167.13 gi|407465005|ref|YP_006775887.1| - 3.5e-13 49.6 0.1 7.2e-13 48.6 0.1 1.5 1 0 0 1 1 1 1 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DUF3141 PF11339.8 gi|407465005|ref|YP_006775887.1| - 4.7e-07 28.6 0.0 6.7e-07 28.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3141) DLH PF01738.18 gi|407465005|ref|YP_006775887.1| - 0.00079 19.0 0.0 0.002 17.7 0.0 1.6 2 0 0 2 2 2 1 Dienelactone hydrolase family BAAT_C PF08840.11 gi|407465005|ref|YP_006775887.1| - 0.0012 18.8 0.0 0.002 18.1 0.0 1.3 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal PHB_depo_C PF06850.11 gi|407465005|ref|YP_006775887.1| - 0.017 14.6 0.0 0.083 12.3 0.0 2.2 1 1 0 1 1 1 0 PHB de-polymerase C-terminus RIH_assoc PF08454.11 gi|407465006|ref|YP_006775888.1| - 0.018 14.9 2.2 0.026 14.4 2.1 1.5 1 1 0 1 1 1 0 RyR and IP3R Homology associated DUF2937 PF11157.8 gi|407465006|ref|YP_006775888.1| - 0.032 13.9 1.0 5.3 6.7 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2937) STAT_int PF02865.17 gi|407465006|ref|YP_006775888.1| - 0.21 12.1 2.6 0.32 11.5 0.5 1.9 1 1 1 2 2 2 0 STAT protein, protein interaction domain DUF4665 PF15679.5 gi|407465006|ref|YP_006775888.1| - 0.65 10.6 4.9 4.6 7.9 3.8 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4665) DUF4473 PF14747.6 gi|407465006|ref|YP_006775888.1| - 0.8 10.3 5.9 7.5 7.2 0.8 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4473) MazE_antitoxin PF04014.18 gi|407465007|ref|YP_006775889.1| - 0.015 15.3 0.2 0.025 14.5 0.2 1.4 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin CortBP2 PF09727.9 gi|407465007|ref|YP_006775889.1| - 0.091 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Cortactin-binding protein-2 AbrB-like PF14250.6 gi|407465007|ref|YP_006775889.1| - 0.13 12.3 0.0 0.32 11.1 0.0 1.6 1 0 0 1 1 1 0 AbrB-like transcriptional regulator MraZ PF02381.18 gi|407465007|ref|YP_006775889.1| - 0.16 12.0 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Abhydrolase_1 PF00561.20 gi|407465008|ref|YP_006775890.1| - 2.9e-27 95.9 0.0 1.6e-19 70.6 0.0 2.0 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|407465008|ref|YP_006775890.1| - 1.3e-21 78.2 0.0 1.6e-21 77.9 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|407465008|ref|YP_006775890.1| - 9.3e-21 74.2 0.0 5.6e-20 71.6 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 gi|407465008|ref|YP_006775890.1| - 1.7e-06 28.0 0.0 0.0087 15.9 0.0 2.8 3 0 0 3 3 3 2 Phospholipase/Carboxylesterase Ndr PF03096.14 gi|407465008|ref|YP_006775890.1| - 0.00014 20.6 0.0 0.00021 20.1 0.0 1.2 1 0 0 1 1 1 1 Ndr family Abhydrolase_5 PF12695.7 gi|407465008|ref|YP_006775890.1| - 0.0019 18.0 0.0 0.52 10.1 0.0 2.3 2 0 0 2 2 2 1 Alpha/beta hydrolase family Ser_hydrolase PF06821.13 gi|407465008|ref|YP_006775890.1| - 0.0045 16.9 0.0 0.72 9.7 0.0 2.5 2 1 0 2 2 2 1 Serine hydrolase BAAT_C PF08840.11 gi|407465008|ref|YP_006775890.1| - 0.01 15.8 0.0 0.025 14.5 0.0 1.5 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal UPF0227 PF05728.12 gi|407465008|ref|YP_006775890.1| - 0.015 15.2 0.0 0.064 13.2 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) FSH1 PF03959.13 gi|407465008|ref|YP_006775890.1| - 0.02 14.6 0.0 0.1 12.2 0.0 2.2 2 1 0 2 2 2 0 Serine hydrolase (FSH1) Abhydrolase_3 PF07859.13 gi|407465008|ref|YP_006775890.1| - 0.024 14.5 0.0 0.069 13.0 0.0 1.7 1 1 0 1 1 1 0 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 gi|407465008|ref|YP_006775890.1| - 0.029 13.9 0.0 0.053 13.1 0.0 1.3 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region Abhydrolase_4 PF08386.10 gi|407465008|ref|YP_006775890.1| - 0.033 14.3 0.0 0.06 13.5 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein DLH PF01738.18 gi|407465008|ref|YP_006775890.1| - 0.034 13.7 0.0 0.13 11.8 0.0 1.9 2 0 0 2 2 2 0 Dienelactone hydrolase family DUF3530 PF12048.8 gi|407465008|ref|YP_006775890.1| - 0.23 10.8 0.0 0.63 9.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3530) Usp PF00582.26 gi|407465009|ref|YP_006775891.1| - 2.6e-26 92.8 0.0 3e-26 92.6 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family PMSR PF01625.21 gi|407465010|ref|YP_006775892.1| - 6.4e-66 221.2 1.0 7.3e-66 221.1 1.0 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase PAZ_siRNAbind PF12212.8 gi|407465011|ref|YP_006775893.1| - 0.94 9.3 3.3 1.8 8.4 0.3 2.2 1 1 0 2 2 2 0 PAZ domain Robl_LC7 PF03259.17 gi|407465012|ref|YP_006775894.1| - 0.04 13.7 0.0 0.068 13.0 0.0 1.4 1 0 0 1 1 1 0 Roadblock/LC7 domain Methyltransf_11 PF08241.12 gi|407465014|ref|YP_006775896.1| - 1.1e-11 45.3 0.0 1.8e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407465014|ref|YP_006775896.1| - 2.3e-05 25.0 0.0 3.9e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|407465014|ref|YP_006775896.1| - 0.00023 21.1 0.0 0.00033 20.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|407465014|ref|YP_006775896.1| - 0.0025 17.2 0.0 0.009 15.3 0.0 1.7 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.6 gi|407465014|ref|YP_006775896.1| - 0.0041 16.9 0.0 0.011 15.5 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|407465014|ref|YP_006775896.1| - 0.0073 15.7 0.0 0.013 14.8 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 gi|407465014|ref|YP_006775896.1| - 0.049 13.5 0.0 0.09 12.6 0.0 1.5 1 0 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_12 PF08242.12 gi|407465014|ref|YP_006775896.1| - 0.054 14.2 0.0 0.11 13.3 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain CtsR_C PF17727.1 gi|407465014|ref|YP_006775896.1| - 0.17 12.0 0.0 0.3 11.2 0.0 1.4 1 0 0 1 1 1 0 CtsR C-terminal dimerization domain RDD PF06271.12 gi|407465015|ref|YP_006775897.1| - 1.9e-20 73.5 0.9 2.7e-20 73.0 0.9 1.2 1 0 0 1 1 1 1 RDD family HATPase_c PF02518.26 gi|407465016|ref|YP_006775898.1| - 2.5e-23 82.7 0.1 4.2e-23 82.0 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|407465016|ref|YP_006775898.1| - 2.8e-10 40.0 0.0 1.5e-09 37.7 0.0 2.0 2 0 0 2 2 2 1 GHKL domain HisKA PF00512.25 gi|407465016|ref|YP_006775898.1| - 3.3e-10 39.9 0.1 7e-10 38.8 0.1 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 gi|407465016|ref|YP_006775898.1| - 0.00014 21.7 0.0 0.0003 20.6 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|407465016|ref|YP_006775898.1| - 0.00021 21.3 0.0 0.00031 20.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Ribosomal_S4Pg PF11993.8 gi|407465016|ref|YP_006775898.1| - 0.035 14.2 0.2 0.057 13.5 0.2 1.3 1 0 0 1 1 1 0 Ribosomal S4P (gammaproteobacterial) PAS_9 PF13426.7 gi|407465017|ref|YP_006775899.1| - 2.7e-19 69.3 0.2 3.2e-19 69.1 0.2 1.1 1 0 0 1 1 1 1 PAS domain PAS_3 PF08447.12 gi|407465017|ref|YP_006775899.1| - 3.5e-13 49.6 0.1 4.3e-13 49.4 0.1 1.1 1 0 0 1 1 1 1 PAS fold PAS PF00989.25 gi|407465017|ref|YP_006775899.1| - 3e-12 46.5 0.0 3.7e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|407465017|ref|YP_006775899.1| - 2.6e-09 37.3 0.0 3e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|407465017|ref|YP_006775899.1| - 0.00027 20.9 0.0 0.00046 20.1 0.0 1.4 1 0 0 1 1 1 1 PAS domain Aminotran_3 PF00202.21 gi|407465018|ref|YP_006775900.1| - 7.2e-57 192.9 0.0 9.6e-57 192.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.21 gi|407465018|ref|YP_006775900.1| - 0.099 11.9 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase DUF2862 PF11061.8 gi|407465019|ref|YP_006775901.1| - 0.07 13.0 0.3 0.14 12.1 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2862) DZR PF12773.7 gi|407465020|ref|YP_006775902.1| - 0.025 14.6 6.1 1 9.4 6.6 2.2 1 1 1 2 2 2 0 Double zinc ribbon zf-NADH-PPase PF09297.11 gi|407465020|ref|YP_006775902.1| - 0.16 11.6 7.4 2.1 8.1 0.0 3.3 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-RRN7 PF11781.8 gi|407465020|ref|YP_006775902.1| - 0.23 11.2 5.7 6.9 6.4 0.1 3.1 3 0 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-C2H2 PF00096.26 gi|407465020|ref|YP_006775902.1| - 1.9 9.1 8.9 11 6.8 0.6 3.3 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-ribbon_3 PF13248.6 gi|407465020|ref|YP_006775902.1| - 5.4 6.6 10.2 2.5 7.6 0.6 3.2 3 0 0 3 3 3 0 zinc-ribbon domain zf-C2H2_4 PF13894.6 gi|407465020|ref|YP_006775902.1| - 5.9 8.0 7.9 24 6.1 0.1 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger TF_Zn_Ribbon PF08271.12 gi|407465020|ref|YP_006775902.1| - 8.4 6.0 11.5 36 4.0 0.1 3.1 2 1 0 2 2 2 0 TFIIB zinc-binding TrkH PF02386.16 gi|407465023|ref|YP_006775905.1| - 4.5e-23 81.5 22.4 2.7e-18 65.7 5.5 2.6 1 1 1 2 2 2 2 Cation transport protein CBS PF00571.28 gi|407465023|ref|YP_006775905.1| - 4e-14 52.8 1.3 1.5e-07 31.7 0.1 2.4 2 0 0 2 2 2 2 CBS domain NitrOD1 PF18549.1 gi|407465024|ref|YP_006775906.1| - 2e-09 37.2 0.4 2.3e-09 37.1 0.4 1.1 1 0 0 1 1 1 1 Nitrosopumilus output domain 1 DUF2400 PF09674.10 gi|407465024|ref|YP_006775906.1| - 0.051 13.6 0.9 0.051 13.6 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) DUF1003 PF06210.11 gi|407465024|ref|YP_006775906.1| - 0.054 13.6 0.1 0.054 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) TarH PF02203.15 gi|407465024|ref|YP_006775906.1| - 0.054 13.4 0.1 0.063 13.2 0.1 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue HTH_IclR PF09339.10 gi|407465025|ref|YP_006775907.1| - 0.012 15.4 0.0 0.02 14.7 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain MapZ_EC1 PF18041.1 gi|407465025|ref|YP_006775907.1| - 0.035 14.3 1.1 1.3 9.3 0.0 2.6 3 0 0 3 3 3 0 MapZ extracellular domain 1 TrmB PF01978.19 gi|407465025|ref|YP_006775907.1| - 0.053 13.4 0.0 0.098 12.6 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|407465025|ref|YP_006775907.1| - 0.18 11.9 0.0 0.33 11.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Response_reg PF00072.24 gi|407465026|ref|YP_006775908.1| - 6e-20 71.5 0.2 1.1e-19 70.7 0.2 1.4 1 0 0 1 1 1 1 Response regulator receiver domain NitrOD1 PF18549.1 gi|407465026|ref|YP_006775908.1| - 1.6e-08 34.4 0.1 3.5e-08 33.3 0.1 1.5 1 0 0 1 1 1 1 Nitrosopumilus output domain 1 CARDB PF07705.11 gi|407465028|ref|YP_006775910.1| - 7.3e-08 32.6 0.2 1.2e-07 31.9 0.2 1.3 1 0 0 1 1 1 1 CARDB DUF11 PF01345.18 gi|407465028|ref|YP_006775910.1| - 3.2e-06 27.3 2.7 0.00047 20.4 0.8 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF11 NPCBM_assoc PF10633.9 gi|407465028|ref|YP_006775910.1| - 0.00073 19.7 0.0 0.28 11.5 0.1 2.3 2 0 0 2 2 2 2 NPCBM-associated, NEW3 domain of alpha-galactosidase A2M PF00207.22 gi|407465028|ref|YP_006775910.1| - 0.079 12.8 0.2 0.22 11.4 0.0 1.9 2 0 0 2 2 2 0 Alpha-2-macroglobulin family TFIIA_gamma_C PF02751.14 gi|407465028|ref|YP_006775910.1| - 0.16 12.2 0.1 0.39 10.9 0.1 1.7 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit Peptidase_M75 PF09375.10 gi|407465029|ref|YP_006775911.1| - 3.5e-08 33.3 10.0 4.6e-05 23.0 1.6 2.9 3 0 0 3 3 3 2 Imelysin Prismane PF03063.20 gi|407465029|ref|YP_006775911.1| - 0.0029 16.4 7.9 0.067 11.9 0.3 3.1 3 0 0 3 3 3 3 Prismane/CO dehydrogenase family GerPC PF10737.9 gi|407465029|ref|YP_006775911.1| - 0.0055 16.8 13.9 0.15 12.1 0.2 4.7 4 1 1 5 5 5 2 Spore germination protein GerPC DUF3751 PF12571.8 gi|407465029|ref|YP_006775911.1| - 0.01 15.9 0.1 0.94 9.5 0.0 2.9 2 1 1 3 3 3 0 Phage tail-collar fibre protein Gp-FAR-1 PF05823.12 gi|407465029|ref|YP_006775911.1| - 0.013 15.8 5.7 1.3 9.4 0.2 2.9 3 0 0 3 3 3 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DUF234 PF03008.14 gi|407465029|ref|YP_006775911.1| - 0.1 13.1 0.3 45 4.6 0.0 3.4 4 0 0 4 4 4 0 Archaea bacterial proteins of unknown function EF-G-binding_N PF07299.11 gi|407465029|ref|YP_006775911.1| - 0.48 11.0 4.3 2.5 8.7 0.0 3.7 3 0 0 3 3 3 0 Elongation factor G-binding protein, N-terminal Mst1_SARAH PF11629.8 gi|407465029|ref|YP_006775911.1| - 1.8 8.7 9.5 36 4.5 0.8 4.3 4 0 0 4 4 4 0 C terminal SARAH domain of Mst1 Hydantoinase_A PF01968.18 gi|407465030|ref|YP_006775912.1| - 7.9e-59 199.3 1.9 7.9e-59 199.3 1.9 2.1 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|407465030|ref|YP_006775912.1| - 4.2e-20 72.2 8.5 1.2e-18 67.4 5.0 3.2 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase N-terminal region FGGY_N PF00370.21 gi|407465030|ref|YP_006775912.1| - 4.1e-06 26.5 1.3 1.3e-05 24.9 1.3 1.9 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain MutL PF13941.6 gi|407465030|ref|YP_006775912.1| - 8.1e-06 24.7 3.4 0.00078 18.1 0.7 2.5 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|407465030|ref|YP_006775912.1| - 0.00024 20.7 7.0 0.0008 19.0 1.8 2.7 2 1 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family CH PF00307.31 gi|407465030|ref|YP_006775912.1| - 0.18 12.0 0.3 0.59 10.3 0.1 2.0 2 0 0 2 2 2 0 Calponin homology (CH) domain FtsA PF14450.6 gi|407465030|ref|YP_006775912.1| - 0.2 12.1 7.7 2.2 8.8 0.6 3.5 2 1 1 3 3 3 0 Cell division protein FtsA FTR1 PF03239.14 gi|407465031|ref|YP_006775913.1| - 2.1e-21 76.4 11.3 4e-21 75.5 11.3 1.4 1 0 0 1 1 1 1 Iron permease FTR1 family Sec3_C_2 PF15278.6 gi|407465031|ref|YP_006775913.1| - 0.061 13.7 0.3 0.23 11.8 0.3 2.0 1 0 0 1 1 1 0 Sec3 exocyst complex subunit SapB_1 PF05184.15 gi|407465031|ref|YP_006775913.1| - 0.22 11.6 2.4 0.33 11.0 0.2 2.5 3 0 0 3 3 3 0 Saposin-like type B, region 1 DegQ PF08181.11 gi|407465031|ref|YP_006775913.1| - 2 8.5 6.6 0.64 10.1 1.1 3.1 3 0 0 3 3 3 0 DegQ (SacQ) family TrmB PF01978.19 gi|407465032|ref|YP_006775914.1| - 0.011 15.6 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Syntaxin-6_N PF09177.11 gi|407465032|ref|YP_006775914.1| - 0.062 13.9 0.2 0.072 13.6 0.2 1.2 1 0 0 1 1 1 0 Syntaxin 6, N-terminal Gp_dh_C PF02800.20 gi|407465032|ref|YP_006775914.1| - 0.064 12.8 0.2 0.083 12.5 0.2 1.2 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HTH_20 PF12840.7 gi|407465032|ref|YP_006775914.1| - 0.21 11.7 0.0 0.29 11.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain FEZ PF07763.13 gi|407465035|ref|YP_006775917.1| - 0.02 14.6 0.9 0.031 14.0 0.9 1.3 1 0 0 1 1 1 0 FEZ-like protein MIF4G_like_2 PF09090.11 gi|407465035|ref|YP_006775917.1| - 0.06 12.8 0.3 0.23 10.9 0.0 1.8 2 0 0 2 2 2 0 MIF4G like FeoB_Cyto PF17910.1 gi|407465035|ref|YP_006775917.1| - 0.31 11.6 4.1 0.69 10.5 4.0 1.6 1 1 0 1 1 1 0 FeoB cytosolic helical domain BURP PF03181.15 gi|407465036|ref|YP_006775918.1| - 0.039 13.5 1.1 0.046 13.3 1.1 1.1 1 0 0 1 1 1 0 BURP domain Inhibitor_I42 PF09394.10 gi|407465037|ref|YP_006775919.1| - 0.054 13.9 0.0 2.2 8.8 0.0 2.9 2 0 0 2 2 2 0 Chagasin family peptidase inhibitor I42 DUF4981 PF16353.5 gi|407465038|ref|YP_006775920.1| - 0.067 13.7 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function(DUF4981) DUF3149 PF11346.8 gi|407465038|ref|YP_006775920.1| - 1.9 8.2 5.6 3.3 7.4 5.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) T2SSF PF00482.23 gi|407465039|ref|YP_006775921.1| - 1.2e-17 64.1 0.4 1.9e-14 53.7 0.1 3.9 5 0 0 5 5 5 2 Type II secretion system (T2SS), protein F HlyE PF06109.13 gi|407465039|ref|YP_006775921.1| - 0.0098 15.2 1.2 0.03 13.6 0.1 2.3 3 0 0 3 3 3 1 Haemolysin E (HlyE) DUF2207 PF09972.9 gi|407465039|ref|YP_006775921.1| - 0.25 10.1 21.8 1.3 7.7 0.4 4.0 3 1 0 3 3 3 0 Predicted membrane protein (DUF2207) DUF3938 PF13074.6 gi|407465039|ref|YP_006775921.1| - 8.4 6.7 10.1 0.27 11.5 1.0 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3938) DUF1230 PF06799.11 gi|407465039|ref|YP_006775921.1| - 9.9 6.3 6.6 19 5.3 0.1 3.4 3 0 0 3 3 3 0 Conserved in the green lineage and diatoms 27 DUF824 PF05688.11 gi|407465040|ref|YP_006775922.1| - 0.008 16.0 1.4 2.2 8.2 0.1 2.8 2 0 0 2 2 2 2 Salmonella repeat of unknown function (DUF824) Pilin_N PF07790.11 gi|407465040|ref|YP_006775922.1| - 0.028 15.3 3.3 0.06 14.3 3.3 1.6 1 0 0 1 1 1 0 Archaeal Type IV pilin, N-terminal T2SSE PF00437.20 gi|407465042|ref|YP_006775924.1| - 6.1e-42 143.6 0.1 1.3e-41 142.5 0.1 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|407465042|ref|YP_006775924.1| - 0.0098 15.6 0.3 0.024 14.3 0.3 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|407465042|ref|YP_006775924.1| - 0.015 15.8 0.1 0.045 14.3 0.1 2.1 1 1 0 1 1 1 0 ABC transporter Rtt106 PF08512.12 gi|407465043|ref|YP_006775925.1| - 0.11 12.9 0.5 5.2 7.6 0.5 2.2 2 0 0 2 2 2 0 Histone chaperone Rttp106-like PadR PF03551.14 gi|407465045|ref|YP_006775927.1| - 0.00035 20.5 0.0 0.071 13.1 0.0 2.5 2 0 0 2 2 2 2 Transcriptional regulator PadR-like family Replic_Relax PF13814.6 gi|407465045|ref|YP_006775927.1| - 0.0021 18.2 0.0 0.0031 17.6 0.0 1.4 1 0 0 1 1 1 1 Replication-relaxation TrmB PF01978.19 gi|407465045|ref|YP_006775927.1| - 0.068 13.1 0.1 1.1 9.2 0.0 2.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Phage-MuB_C PF09077.11 gi|407465045|ref|YP_006775927.1| - 0.13 12.1 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Mu B transposition protein, C terminal ParBc PF02195.18 gi|407465046|ref|YP_006775928.1| - 5.7e-09 36.1 0.0 1.4e-08 34.9 0.0 1.7 1 0 0 1 1 1 1 ParB-like nuclease domain ParBc_2 PF08857.11 gi|407465046|ref|YP_006775928.1| - 0.00043 20.4 0.2 0.0015 18.6 0.0 2.0 2 0 0 2 2 2 1 Putative ParB-like nuclease Bot1p PF12298.8 gi|407465046|ref|YP_006775928.1| - 0.0049 17.1 0.3 0.01 16.0 0.3 1.5 1 0 0 1 1 1 1 Eukaryotic mitochondrial regulator protein TF_Zn_Ribbon PF08271.12 gi|407465047|ref|YP_006775929.1| - 0.017 14.6 0.5 0.033 13.7 0.5 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding Condensin2nSMC PF12422.8 gi|407465047|ref|YP_006775929.1| - 0.11 12.7 3.4 4 7.6 0.4 2.3 1 1 0 2 2 2 0 Condensin II non structural maintenance of chromosomes subunit TrmB PF01978.19 gi|407465048|ref|YP_006775930.1| - 0.0024 17.7 0.1 0.0042 16.9 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FUR PF01475.19 gi|407465048|ref|YP_006775930.1| - 0.022 14.9 0.3 0.043 14.0 0.2 1.5 1 1 0 1 1 1 0 Ferric uptake regulator family PadR PF03551.14 gi|407465048|ref|YP_006775930.1| - 0.058 13.4 0.2 0.12 12.4 0.1 1.6 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family LRR_4 PF12799.7 gi|407465048|ref|YP_006775930.1| - 0.066 13.7 0.2 0.49 10.9 0.0 2.1 2 0 0 2 2 2 0 Leucine Rich repeats (2 copies) HTH_5 PF01022.20 gi|407465048|ref|YP_006775930.1| - 0.084 12.8 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|407465048|ref|YP_006775930.1| - 0.084 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF2250 PF10007.9 gi|407465048|ref|YP_006775930.1| - 0.12 12.5 2.1 0.11 12.6 0.8 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_7 PF02796.15 gi|407465048|ref|YP_006775930.1| - 0.13 12.4 1.7 0.4 10.8 0.5 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain of resolvase HTH_20 PF12840.7 gi|407465048|ref|YP_006775930.1| - 0.21 11.6 0.0 0.29 11.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4490 PF14892.6 gi|407465050|ref|YP_006775932.1| - 0.036 14.1 1.2 0.79 9.8 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4490) CD20 PF04103.15 gi|407465050|ref|YP_006775932.1| - 0.73 9.9 2.8 22 5.1 0.3 2.2 2 0 0 2 2 2 0 CD20-like family Chordopox_A13L PF05961.11 gi|407465050|ref|YP_006775932.1| - 3.4 8.0 5.0 7.8 6.8 0.6 2.3 2 0 0 2 2 2 0 Chordopoxvirus A13L protein DUF3188 PF11384.8 gi|407465051|ref|YP_006775933.1| - 0.11 12.2 1.7 4.3 7.1 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3188) DUF2207 PF09972.9 gi|407465051|ref|YP_006775933.1| - 0.3 9.8 0.9 0.33 9.7 0.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) HEPN_RiboL-PSP PF18735.1 gi|407465054|ref|YP_006775936.1| - 0.00014 21.8 9.9 0.00023 21.2 9.9 1.2 1 0 0 1 1 1 1 RiboL-PSP-HEPN HEPN_Apea PF18739.1 gi|407465054|ref|YP_006775936.1| - 0.15 12.5 7.6 0.39 11.2 7.6 1.8 1 1 0 1 1 1 0 Apea-like HEPN DUF3883 PF13020.6 gi|407465055|ref|YP_006775937.1| - 0.016 15.3 1.4 0.016 15.3 1.4 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF3883) Nucleoporin_FG PF13634.6 gi|407465055|ref|YP_006775937.1| - 0.047 14.5 3.7 0.22 12.4 3.7 2.1 1 1 0 1 1 1 0 Nucleoporin FG repeat region VRR_NUC PF08774.11 gi|407465055|ref|YP_006775937.1| - 0.057 13.5 1.0 0.087 12.9 0.2 1.7 2 0 0 2 2 2 0 VRR-NUC domain RICTOR_M PF14666.6 gi|407465056|ref|YP_006775938.1| - 0.52 10.1 5.0 0.71 9.7 0.7 3.1 2 1 1 3 3 3 0 Rapamycin-insensitive companion of mTOR, middle domain PhdYeFM_antitox PF02604.19 gi|407465057|ref|YP_006775939.1| - 0.14 12.0 0.1 0.84 9.5 0.0 2.1 2 0 0 2 2 2 0 Antitoxin Phd_YefM, type II toxin-antitoxin system AAA_22 PF13401.6 gi|407465058|ref|YP_006775940.1| - 0.00027 21.2 0.0 0.00028 21.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|407465058|ref|YP_006775940.1| - 0.00074 19.9 0.0 0.00075 19.9 0.0 1.0 1 0 0 1 1 1 1 AAA ATPase domain DUF87 PF01935.17 gi|407465058|ref|YP_006775940.1| - 0.0012 19.0 0.0 0.0014 18.7 0.0 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain Pox_A32 PF04665.12 gi|407465058|ref|YP_006775940.1| - 0.0025 17.3 0.0 0.0027 17.2 0.0 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein Sigma54_activat PF00158.26 gi|407465058|ref|YP_006775940.1| - 0.0043 16.8 0.0 0.0043 16.8 0.0 1.1 1 0 0 1 1 1 1 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|407465058|ref|YP_006775940.1| - 0.011 16.1 0.0 0.016 15.6 0.0 1.2 1 0 0 1 1 1 0 RNA helicase DUF2075 PF09848.9 gi|407465058|ref|YP_006775940.1| - 0.011 15.0 0.0 0.014 14.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ABC_tran PF00005.27 gi|407465058|ref|YP_006775940.1| - 0.012 16.1 0.0 0.012 16.1 0.0 1.1 1 0 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 gi|407465058|ref|YP_006775940.1| - 0.014 14.7 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin Ploopntkinase2 PF18747.1 gi|407465058|ref|YP_006775940.1| - 0.027 13.8 0.0 0.03 13.6 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase2 AAA_7 PF12775.7 gi|407465058|ref|YP_006775940.1| - 0.054 13.0 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region TrwB_AAD_bind PF10412.9 gi|407465058|ref|YP_006775940.1| - 0.073 12.0 0.0 0.088 11.7 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_29 PF13555.6 gi|407465058|ref|YP_006775940.1| - 0.073 12.8 0.0 0.091 12.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain PhoH PF02562.16 gi|407465058|ref|YP_006775940.1| - 0.086 12.3 0.0 0.096 12.1 0.0 1.1 1 0 0 1 1 1 0 PhoH-like protein NB-ARC PF00931.22 gi|407465058|ref|YP_006775940.1| - 0.087 12.0 0.0 0.09 11.9 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_33 PF13671.6 gi|407465058|ref|YP_006775940.1| - 0.098 12.8 0.0 0.15 12.3 0.0 1.4 2 0 0 2 2 1 0 AAA domain T2SSE PF00437.20 gi|407465058|ref|YP_006775940.1| - 0.1 11.6 0.0 0.1 11.6 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_5 PF07728.14 gi|407465058|ref|YP_006775940.1| - 0.11 12.5 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PRK PF00485.18 gi|407465058|ref|YP_006775940.1| - 0.11 12.2 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 gi|407465058|ref|YP_006775940.1| - 0.12 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 NACHT domain FtsK_SpoIIIE PF01580.18 gi|407465058|ref|YP_006775940.1| - 0.12 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family MobB PF03205.14 gi|407465058|ref|YP_006775940.1| - 0.14 12.1 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Mg_chelatase PF01078.21 gi|407465058|ref|YP_006775940.1| - 0.14 11.5 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 gi|407465058|ref|YP_006775940.1| - 0.15 12.4 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 gi|407465058|ref|YP_006775940.1| - 0.19 11.8 0.5 0.32 11.0 0.4 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RelA_SpoT PF04607.17 gi|407465059|ref|YP_006775941.1| - 7.3e-23 81.1 2.6 7.3e-23 81.1 2.6 2.3 2 1 0 3 3 3 1 Region found in RelA / SpoT proteins NEXCaM_BD PF16644.5 gi|407465059|ref|YP_006775941.1| - 0.031 14.5 0.1 0.081 13.2 0.1 1.7 1 0 0 1 1 1 0 Regulatory region of Na+/H+ exchanger NHE binds to calmodulin DUF4709 PF15821.5 gi|407465059|ref|YP_006775941.1| - 0.14 12.4 3.6 0.5 10.7 0.2 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4709) DUF4739 PF15893.5 gi|407465060|ref|YP_006775942.1| - 0.17 11.4 0.1 0.26 10.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4739) TFIIE_alpha PF02002.17 gi|407465061|ref|YP_006775943.1| - 0.0069 16.2 9.1 0.0069 16.2 9.1 1.6 1 1 1 2 2 2 1 TFIIE alpha subunit DUF883 PF05957.13 gi|407465061|ref|YP_006775943.1| - 0.51 11.0 5.8 0.64 10.7 4.8 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Phage_integrase PF00589.22 gi|407465062|ref|YP_006775944.1| - 7.1e-07 29.2 0.4 1.9e-06 27.8 0.0 1.8 2 1 0 2 2 2 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|407465062|ref|YP_006775944.1| - 2.3e-06 28.0 0.1 1.4e-05 25.5 0.0 2.2 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 gi|407465062|ref|YP_006775944.1| - 0.00014 22.2 1.3 0.01 16.2 0.2 3.1 2 1 1 3 3 3 1 Phage integrase SAM-like domain Phage_int_SAM_1 PF02899.17 gi|407465062|ref|YP_006775944.1| - 0.044 14.1 0.2 0.66 10.3 0.0 2.7 2 1 1 3 3 3 0 Phage integrase, N-terminal SAM-like domain TPR_2 PF07719.17 gi|407465063|ref|YP_006775945.1| - 7.4e-40 131.9 2.3 1.5e-07 30.9 0.2 7.1 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_1 PF00515.28 gi|407465063|ref|YP_006775945.1| - 2.3e-38 128.5 12.0 1.8e-07 30.6 0.0 7.1 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_11 PF13414.6 gi|407465063|ref|YP_006775945.1| - 9.5e-30 102.0 3.0 5.3e-07 29.2 0.4 6.5 2 1 5 7 7 7 5 TPR repeat TPR_17 PF13431.6 gi|407465063|ref|YP_006775945.1| - 5.2e-28 95.4 6.3 1.6e-07 31.2 0.1 6.6 7 0 0 7 7 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|407465063|ref|YP_006775945.1| - 3.2e-24 85.3 0.0 5.3e-08 33.4 0.0 5.0 3 1 2 5 5 5 4 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407465063|ref|YP_006775945.1| - 1.3e-23 81.2 10.4 2e-07 30.7 0.0 7.1 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407465063|ref|YP_006775945.1| - 6.9e-23 79.4 0.0 0.042 14.7 0.0 7.1 1 1 6 7 7 7 5 Tetratricopeptide repeat TPR_6 PF13174.6 gi|407465063|ref|YP_006775945.1| - 5.3e-22 76.9 0.0 0.17 12.6 0.0 7.2 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407465063|ref|YP_006775945.1| - 1.9e-20 73.1 0.3 0.00021 21.8 0.2 4.2 2 2 1 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407465063|ref|YP_006775945.1| - 3.4e-17 62.5 1.6 1.1e-06 28.8 0.4 5.6 2 2 3 5 5 5 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|407465063|ref|YP_006775945.1| - 8.6e-17 61.1 2.3 1.3e-05 25.3 0.1 3.1 2 1 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 gi|407465063|ref|YP_006775945.1| - 1.5e-14 53.9 0.0 1.4e-08 34.7 0.0 3.4 1 1 4 5 5 5 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|407465063|ref|YP_006775945.1| - 3.7e-12 45.4 0.0 0.011 15.8 0.0 5.9 6 1 1 7 7 5 2 Tetratricopeptide repeat NARP1 PF12569.8 gi|407465063|ref|YP_006775945.1| - 2.2e-11 43.4 4.8 0.00013 21.0 0.1 3.0 1 1 2 3 3 3 3 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.6 gi|407465063|ref|YP_006775945.1| - 4.1e-08 33.2 4.2 0.022 14.8 0.0 5.6 3 2 3 6 6 6 1 Fis1 C-terminal tetratricopeptide repeat TPR_20 PF14561.6 gi|407465063|ref|YP_006775945.1| - 7e-08 32.7 5.1 0.028 14.7 0.1 5.0 1 1 3 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|407465063|ref|YP_006775945.1| - 1.5e-07 31.0 3.4 1.2 9.1 0.0 5.2 6 0 0 6 6 5 2 Tetratricopeptide repeat MIT PF04212.18 gi|407465063|ref|YP_006775945.1| - 2.1e-06 27.7 10.4 0.79 9.8 0.1 6.4 3 2 4 7 7 7 2 MIT (microtubule interacting and transport) domain Rapsyn_N PF10579.9 gi|407465063|ref|YP_006775945.1| - 8.1e-05 22.6 0.1 2.5 8.2 0.0 4.5 2 2 1 4 4 4 1 Rapsyn N-terminal myristoylation and linker region DUF3856 PF12968.7 gi|407465063|ref|YP_006775945.1| - 0.00015 21.8 0.6 12 5.9 0.0 5.0 1 1 4 5 5 5 0 Domain of Unknown Function (DUF3856) TPR_4 PF07721.14 gi|407465063|ref|YP_006775945.1| - 0.00019 21.7 0.0 30 5.6 0.0 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|407465063|ref|YP_006775945.1| - 0.0002 20.9 5.6 0.18 11.2 0.1 3.7 1 1 3 4 4 4 2 Coatomer epsilon subunit Thioredoxin_6 PF13848.6 gi|407465063|ref|YP_006775945.1| - 0.00049 20.0 0.3 0.098 12.6 0.1 2.5 2 0 0 2 2 2 1 Thioredoxin-like domain PPR PF01535.20 gi|407465063|ref|YP_006775945.1| - 0.00059 19.9 6.8 1.7 9.1 0.0 6.0 7 0 0 7 7 5 1 PPR repeat TPR_15 PF13429.6 gi|407465063|ref|YP_006775945.1| - 0.00061 19.1 0.3 0.84 8.8 0.0 3.2 1 1 0 2 2 2 1 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 gi|407465063|ref|YP_006775945.1| - 0.0018 17.9 0.0 0.33 10.6 0.0 2.7 2 1 1 3 3 3 1 Bacterial type III secretion protein (HrpB1_HrpK) RPN6_N PF18055.1 gi|407465063|ref|YP_006775945.1| - 0.0021 18.4 3.4 5.2 7.5 0.0 3.5 3 1 0 3 3 3 0 26S proteasome regulatory subunit RPN6 N-terminal domain RPN7 PF10602.9 gi|407465063|ref|YP_006775945.1| - 0.003 17.3 0.9 0.61 9.8 0.0 3.4 1 1 3 4 4 4 1 26S proteasome subunit RPN7 BTAD PF03704.17 gi|407465063|ref|YP_006775945.1| - 0.003 18.0 0.0 5.8 7.3 0.0 3.7 2 1 1 3 3 3 0 Bacterial transcriptional activator domain Alkyl_sulf_dimr PF14863.6 gi|407465063|ref|YP_006775945.1| - 0.0039 17.6 2.2 1.6 9.1 0.2 3.3 1 1 0 3 3 3 1 Alkyl sulfatase dimerisation SRP_TPR_like PF17004.5 gi|407465063|ref|YP_006775945.1| - 0.004 17.2 3.8 0.86 9.6 1.1 3.2 1 1 2 3 3 3 1 Putative TPR-like repeat PPTA PF01239.22 gi|407465063|ref|YP_006775945.1| - 0.0048 16.6 10.0 0.34 10.7 0.0 5.2 6 0 0 6 6 5 1 Protein prenyltransferase alpha subunit repeat TPR_21 PF09976.9 gi|407465063|ref|YP_006775945.1| - 0.014 15.1 0.9 0.14 11.8 0.2 2.3 1 1 2 3 3 3 0 Tetratricopeptide repeat-like domain DUF5113 PF17140.4 gi|407465063|ref|YP_006775945.1| - 0.055 13.3 1.3 42 3.9 0.0 3.8 2 2 2 4 4 4 0 Domain of unknown function (DUF5113) Sec16_C PF12931.7 gi|407465063|ref|YP_006775945.1| - 0.058 13.0 1.4 0.54 9.9 1.4 2.2 1 1 0 1 1 1 0 Sec23-binding domain of Sec16 Lsm_interact PF05391.11 gi|407465063|ref|YP_006775945.1| - 0.066 12.7 0.3 0.15 11.6 0.3 1.5 1 0 0 1 1 1 0 Lsm interaction motif Ribosomal_S7 PF00177.21 gi|407465063|ref|YP_006775945.1| - 0.083 12.5 0.5 2.2 7.9 0.0 2.7 2 1 0 2 2 2 0 Ribosomal protein S7p/S5e R2K_3 PF14243.6 gi|407465063|ref|YP_006775945.1| - 0.12 12.4 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 ANAPC5 PF12862.7 gi|407465063|ref|YP_006775945.1| - 0.16 12.0 0.8 5.3 7.2 0.1 3.1 1 1 1 3 3 2 0 Anaphase-promoting complex subunit 5 DUF627 PF04781.12 gi|407465063|ref|YP_006775945.1| - 0.24 11.4 4.9 35 4.5 0.1 4.4 3 2 3 6 6 6 0 Protein of unknown function (DUF627) PPR_2 PF13041.6 gi|407465063|ref|YP_006775945.1| - 0.42 10.8 5.5 28 5.0 0.0 3.8 4 0 0 4 4 3 0 PPR repeat family Clathrin PF00637.20 gi|407465063|ref|YP_006775945.1| - 0.67 9.8 5.8 5.7 6.8 1.1 3.7 1 1 2 3 3 3 0 Region in Clathrin and VPS Toprim_Crpt PF13342.6 gi|407465064|ref|YP_006775946.1| - 0.01 15.8 0.1 0.039 13.9 0.1 2.0 1 0 0 1 1 1 0 C-terminal repeat of topoisomerase COX14 PF14880.6 gi|407465064|ref|YP_006775946.1| - 0.058 13.3 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Cytochrome oxidase c assembly SHOCT PF09851.9 gi|407465065|ref|YP_006775947.1| - 7.2e-08 31.9 3.6 2.5e-07 30.2 3.6 2.0 1 0 0 1 1 1 1 Short C-terminal domain DUF5610 PF18433.1 gi|407465065|ref|YP_006775947.1| - 0.023 15.2 1.8 0.023 15.2 1.8 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF5610) ATP-synt_B PF00430.18 gi|407465065|ref|YP_006775947.1| - 0.27 11.3 10.4 0.51 10.4 10.5 1.5 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) Cupin_2 PF07883.11 gi|407465066|ref|YP_006775948.1| - 4.1e-06 26.4 0.7 2.9e-05 23.7 0.7 2.0 1 1 0 1 1 1 1 Cupin domain Auxin_BP PF02041.16 gi|407465066|ref|YP_006775948.1| - 2.1e-05 24.2 0.1 2.5e-05 24.0 0.1 1.1 1 0 0 1 1 1 1 Auxin binding protein Cupin_1 PF00190.22 gi|407465066|ref|YP_006775948.1| - 6.5e-05 22.6 0.0 7.2e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Cupin Cupin_8 PF13621.6 gi|407465066|ref|YP_006775948.1| - 0.01 15.5 0.1 0.046 13.4 0.0 1.8 1 1 1 2 2 2 0 Cupin-like domain Cupin_2 PF07883.11 gi|407465067|ref|YP_006775949.1| - 2.9e-15 55.7 0.0 5.8e-15 54.8 0.0 1.5 2 0 0 2 2 2 1 Cupin domain MannoseP_isomer PF01050.18 gi|407465067|ref|YP_006775949.1| - 8.7e-08 32.2 0.0 9.6e-08 32.0 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_1 PF00190.22 gi|407465067|ref|YP_006775949.1| - 1.8e-06 27.6 0.0 2.3e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 Cupin Ectoine_synth PF06339.12 gi|407465067|ref|YP_006775949.1| - 5.5e-06 26.6 0.1 6.2e-06 26.4 0.1 1.1 1 0 0 1 1 1 1 Ectoine synthase AraC_binding PF02311.19 gi|407465067|ref|YP_006775949.1| - 4.2e-05 23.5 0.0 5.8e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|407465067|ref|YP_006775949.1| - 4.6e-05 23.0 0.0 6.6e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) EutQ PF06249.12 gi|407465067|ref|YP_006775949.1| - 0.00023 21.0 0.0 0.00034 20.4 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ CENP-C_C PF11699.8 gi|407465067|ref|YP_006775949.1| - 0.0033 17.6 0.0 0.0046 17.1 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like Cupin_5 PF06172.11 gi|407465067|ref|YP_006775949.1| - 0.0062 16.7 0.0 0.008 16.3 0.0 1.4 1 1 0 1 1 1 1 Cupin superfamily (DUF985) GPI PF06560.11 gi|407465067|ref|YP_006775949.1| - 0.027 13.8 0.0 0.05 12.9 0.0 1.5 1 1 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) Auxin_BP PF02041.16 gi|407465067|ref|YP_006775949.1| - 0.11 12.2 0.0 0.15 11.7 0.0 1.4 1 1 0 1 1 1 0 Auxin binding protein DnaJ PF00226.31 gi|407465068|ref|YP_006775950.1| - 4e-17 62.1 1.3 1.4e-16 60.4 1.3 1.9 1 0 0 1 1 1 1 DnaJ domain Fer4_13 PF13370.6 gi|407465068|ref|YP_006775950.1| - 2e-11 44.2 2.2 5.3e-11 42.9 2.2 1.8 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|407465068|ref|YP_006775950.1| - 1.4e-07 32.2 3.1 7.4e-07 29.8 3.1 2.2 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_19 PF06902.11 gi|407465068|ref|YP_006775950.1| - 0.002 18.1 2.1 0.0053 16.8 2.1 1.7 1 1 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4 PF00037.27 gi|407465068|ref|YP_006775950.1| - 0.041 13.7 8.7 0.45 10.4 5.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain SLATT_5 PF18160.1 gi|407465068|ref|YP_006775950.1| - 0.065 12.6 0.9 0.13 11.5 0.9 1.4 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 HIT PF01230.23 gi|407465069|ref|YP_006775951.1| - 1.2e-22 80.4 1.0 1.6e-22 80.0 1.0 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|407465069|ref|YP_006775951.1| - 2.9e-12 47.1 0.8 3.6e-12 46.8 0.8 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|407465069|ref|YP_006775951.1| - 0.00059 19.7 0.4 0.00073 19.4 0.4 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 GalP_UDP_tr_C PF02744.17 gi|407465069|ref|YP_006775951.1| - 0.0087 15.8 0.2 0.011 15.5 0.2 1.3 1 1 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, C-terminal domain Microcin PF03526.13 gi|407465070|ref|YP_006775952.1| - 0.15 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein ProQ_C PF17516.2 gi|407465070|ref|YP_006775952.1| - 0.17 11.3 0.0 0.29 10.6 0.0 1.4 1 0 0 1 1 1 0 ProQ C-terminal domain zf-C2H2_4 PF13894.6 gi|407465071|ref|YP_006775953.1| - 0.00022 21.8 0.8 0.00032 21.3 0.8 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-BED PF02892.15 gi|407465071|ref|YP_006775953.1| - 0.00089 19.2 0.5 0.0013 18.7 0.5 1.3 1 0 0 1 1 1 1 BED zinc finger zf-C2H2 PF00096.26 gi|407465071|ref|YP_006775953.1| - 0.0016 18.8 1.0 0.0025 18.2 1.0 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_2 PF12756.7 gi|407465071|ref|YP_006775953.1| - 0.0039 17.5 0.3 0.0041 17.4 0.3 1.1 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-CpG_bind_C PF12269.8 gi|407465071|ref|YP_006775953.1| - 0.057 13.2 0.3 0.061 13.1 0.3 1.0 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain Actin_micro PF17003.5 gi|407465071|ref|YP_006775953.1| - 0.067 12.4 0.6 0.072 12.3 0.6 1.0 1 0 0 1 1 1 0 Putative actin-like family FMN_red PF03358.15 gi|407465072|ref|YP_006775954.1| - 8.4e-36 123.1 0.0 1e-35 122.7 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|407465072|ref|YP_006775954.1| - 3.7e-09 36.6 0.0 4.5e-09 36.3 0.0 1.2 1 1 0 1 1 1 1 Flavodoxin-like fold Lactonase PF10282.9 gi|407465073|ref|YP_006775955.1| - 1.4e-13 50.9 0.2 1.8e-10 40.6 0.0 2.2 1 1 1 2 2 2 2 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|407465073|ref|YP_006775955.1| - 3.2e-09 35.8 1.6 0.00029 19.5 0.1 2.6 1 1 2 3 3 3 3 Cytochrome D1 heme domain DUF4221 PF13970.6 gi|407465073|ref|YP_006775955.1| - 5.2e-08 32.8 4.7 0.06 12.9 0.1 4.4 1 1 3 4 4 4 3 Domain of unknown function (DUF4221) ANAPC4_WD40 PF12894.7 gi|407465073|ref|YP_006775955.1| - 0.0036 17.6 1.1 16 5.9 0.1 4.5 2 2 2 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF1513 PF07433.11 gi|407465073|ref|YP_006775955.1| - 0.027 13.6 0.4 16 4.4 0.0 3.5 2 1 2 4 4 4 0 Protein of unknown function (DUF1513) MCM_OB PF17207.3 gi|407465073|ref|YP_006775955.1| - 0.1 12.4 0.0 23 4.9 0.0 2.6 1 1 2 3 3 3 0 MCM OB domain 3HCDH_N PF02737.18 gi|407465074|ref|YP_006775956.1| - 2.4e-65 219.8 0.5 2.4e-65 219.8 0.5 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|407465074|ref|YP_006775956.1| - 3.3e-35 120.6 0.1 3.5e-25 88.4 0.0 3.0 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|407465074|ref|YP_006775956.1| - 9.7e-06 25.8 0.0 1.9e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|407465074|ref|YP_006775956.1| - 0.00013 22.0 0.5 0.00037 20.5 0.5 1.9 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|407465074|ref|YP_006775956.1| - 0.0013 19.3 0.2 0.0048 17.5 0.2 2.1 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DUF4078 PF13300.6 gi|407465074|ref|YP_006775956.1| - 0.024 14.9 0.1 0.043 14.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4078) UDPG_MGDP_dh_N PF03721.14 gi|407465074|ref|YP_006775956.1| - 0.083 12.5 0.2 0.15 11.7 0.2 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF1803 PF08820.10 gi|407465074|ref|YP_006775956.1| - 0.11 12.5 0.0 0.27 11.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1803) AlaDh_PNT_C PF01262.21 gi|407465074|ref|YP_006775956.1| - 0.16 11.2 0.4 0.31 10.3 0.1 1.7 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain IlvN PF07991.12 gi|407465074|ref|YP_006775956.1| - 0.47 10.0 3.0 27 4.3 3.0 2.5 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain LDcluster4 PF18306.1 gi|407465075|ref|YP_006775957.1| - 2.2e-47 160.6 3.0 2.5e-47 160.4 3.0 1.0 1 0 0 1 1 1 1 SLOG cluster4 family Lysine_decarbox PF03641.14 gi|407465075|ref|YP_006775957.1| - 3.2e-06 27.3 0.1 7.4e-06 26.1 0.1 1.6 1 1 0 1 1 1 1 Possible lysine decarboxylase DNA_processg_A PF02481.15 gi|407465075|ref|YP_006775957.1| - 0.0032 16.7 2.2 0.0097 15.2 0.7 2.0 2 1 0 2 2 2 1 DNA recombination-mediator protein A cpYpsA PF12694.7 gi|407465075|ref|YP_006775957.1| - 0.006 16.4 0.0 0.0088 15.8 0.0 1.2 1 0 0 1 1 1 1 Circularly permutated YpsA SLOG family Thi4 PF01946.17 gi|407465075|ref|YP_006775957.1| - 0.034 13.4 1.5 0.66 9.2 0.0 2.1 2 0 0 2 2 2 0 Thi4 family DAGK_cat PF00781.24 gi|407465075|ref|YP_006775957.1| - 0.042 13.5 4.5 0.19 11.4 0.1 2.3 1 1 1 2 2 2 0 Diacylglycerol kinase catalytic domain zf-C4pol PF14260.6 gi|407465076|ref|YP_006775958.1| - 0.00022 21.6 9.1 0.78 10.3 0.7 3.2 2 1 0 2 2 2 2 C4-type zinc-finger of DNA polymerase delta Cytochrome_C7 PF14522.6 gi|407465076|ref|YP_006775958.1| - 0.031 14.3 13.7 21 5.2 12.5 3.0 2 1 0 2 2 2 0 Cytochrome c7 and related cytochrome c Ribosomal_S14 PF00253.21 gi|407465076|ref|YP_006775958.1| - 0.039 13.7 0.8 7.1 6.5 0.0 2.8 2 1 0 2 2 2 0 Ribosomal protein S14p/S29e Prok-RING_4 PF14447.6 gi|407465076|ref|YP_006775958.1| - 0.098 12.5 18.6 0.11 12.3 0.6 4.7 5 0 0 5 5 5 0 Prokaryotic RING finger family 4 DZR PF12773.7 gi|407465076|ref|YP_006775958.1| - 0.46 10.6 16.6 4.1 7.5 5.0 3.3 1 1 2 3 3 3 0 Double zinc ribbon DUF4428 PF14471.6 gi|407465076|ref|YP_006775958.1| - 2.2 8.3 25.1 0.11 12.4 1.5 4.3 3 2 0 3 3 3 0 Domain of unknown function (DUF4428) Cytochrom_c3_2 PF14537.6 gi|407465076|ref|YP_006775958.1| - 2.5 8.6 17.3 14 6.3 10.9 3.3 1 1 1 2 2 2 0 Cytochrome c3 C1_1 PF00130.22 gi|407465076|ref|YP_006775958.1| - 6.4 6.7 19.1 2.2 8.2 4.4 3.4 1 1 2 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2H2_jaz PF12171.8 gi|407465077|ref|YP_006775959.1| - 2.1e-09 37.4 11.0 5.4e-05 23.4 1.8 2.3 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 gi|407465077|ref|YP_006775959.1| - 3.6e-09 36.6 6.7 0.00032 21.0 0.2 2.1 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|407465077|ref|YP_006775959.1| - 2.3e-08 34.2 5.4 0.0015 19.2 0.9 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-met PF12874.7 gi|407465077|ref|YP_006775959.1| - 8.5e-07 29.2 5.2 0.0011 19.3 0.3 2.2 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf_ZIC PF18366.1 gi|407465077|ref|YP_006775959.1| - 3.7e-05 23.8 4.3 0.0034 17.4 0.8 2.1 1 1 1 2 2 2 2 Zic proteins zinc finger domain zf-C2H2_6 PF13912.6 gi|407465077|ref|YP_006775959.1| - 0.00015 21.7 7.4 0.058 13.4 0.5 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 gi|407465077|ref|YP_006775959.1| - 0.00015 22.0 13.5 0.0051 17.2 0.4 2.9 3 0 0 3 3 3 2 Zinc-finger double domain zf-BED PF02892.15 gi|407465077|ref|YP_006775959.1| - 0.0002 21.3 7.1 0.0064 16.5 2.1 2.2 1 1 1 2 2 2 2 BED zinc finger zf-C2H2_3rep PF18868.1 gi|407465077|ref|YP_006775959.1| - 0.00023 21.8 0.7 0.0013 19.4 0.7 1.8 1 1 0 1 1 1 1 Zinc finger C2H2-type, 3 repeats DUF629 PF04780.12 gi|407465077|ref|YP_006775959.1| - 0.00031 19.4 7.1 0.019 13.5 1.0 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF629) zf-C2H2_2 PF12756.7 gi|407465077|ref|YP_006775959.1| - 0.0013 19.0 9.2 0.068 13.5 2.2 2.0 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf_UBZ PF18439.1 gi|407465077|ref|YP_006775959.1| - 0.0051 16.4 4.5 0.57 9.8 0.2 2.4 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger FOXP-CC PF16159.5 gi|407465077|ref|YP_006775959.1| - 0.02 15.5 4.2 0.18 12.5 0.3 2.1 1 1 1 2 2 2 0 FOXP coiled-coil domain DUF2197 PF09963.9 gi|407465077|ref|YP_006775959.1| - 0.021 15.1 5.2 0.025 14.8 5.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) CpXC PF14353.6 gi|407465077|ref|YP_006775959.1| - 0.021 14.9 2.4 0.7 10.0 2.3 2.0 1 1 0 1 1 1 0 CpXC protein C1_4 PF07975.12 gi|407465077|ref|YP_006775959.1| - 0.023 14.9 2.1 0.034 14.4 2.1 1.4 1 0 0 1 1 1 0 TFIIH C1-like domain Zn-ribbon_8 PF09723.10 gi|407465077|ref|YP_006775959.1| - 0.027 14.6 3.9 0.71 10.0 0.6 2.1 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2HC_2 PF13913.6 gi|407465077|ref|YP_006775959.1| - 0.027 14.3 0.2 0.027 14.3 0.2 2.0 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Prok-RING_1 PF14446.6 gi|407465077|ref|YP_006775959.1| - 0.028 14.3 4.0 0.48 10.4 0.3 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-C2H2_11 PF16622.5 gi|407465077|ref|YP_006775959.1| - 0.03 14.1 0.5 0.18 11.6 0.0 2.0 2 0 0 2 2 2 0 zinc-finger C2H2-type DUF2757 PF10955.8 gi|407465077|ref|YP_006775959.1| - 0.057 13.7 5.1 1.1 9.6 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2757) Actin_micro PF17003.5 gi|407465077|ref|YP_006775959.1| - 0.065 12.4 10.5 0.24 10.5 1.2 2.0 1 1 1 2 2 2 0 Putative actin-like family PyrI_C PF02748.15 gi|407465077|ref|YP_006775959.1| - 0.074 13.0 9.7 1.2 9.1 1.3 2.4 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zinc-ribbons_6 PF07191.12 gi|407465077|ref|YP_006775959.1| - 0.16 11.9 4.5 0.84 9.7 4.4 1.9 1 1 0 1 1 1 0 zinc-ribbons zf-C2H2_8 PF15909.5 gi|407465077|ref|YP_006775959.1| - 0.22 11.9 2.6 0.34 11.2 2.6 1.4 1 1 0 1 1 1 0 C2H2-type zinc ribbon zf-MYST PF17772.1 gi|407465077|ref|YP_006775959.1| - 0.23 11.1 6.0 0.41 10.3 0.6 2.1 2 0 0 2 2 2 0 MYST family zinc finger domain DNA_RNApol_7kD PF03604.13 gi|407465078|ref|YP_006775960.1| - 0.00038 20.1 1.1 0.00064 19.4 1.1 1.4 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|407465078|ref|YP_006775960.1| - 0.18 11.5 0.0 0.32 10.6 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger DUF2688 PF10892.8 gi|407465078|ref|YP_006775960.1| - 0.44 10.0 4.2 1.4 8.4 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) Ribosomal_S10 PF00338.22 gi|407465079|ref|YP_006775961.1| - 2.7e-22 78.8 0.0 3e-22 78.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e CTX_RstB PF07459.11 gi|407465079|ref|YP_006775961.1| - 0.13 12.6 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 CTX phage RstB protein GTP_EFTU PF00009.27 gi|407465080|ref|YP_006775962.1| - 9.8e-47 159.0 0.1 1.4e-46 158.5 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|407465080|ref|YP_006775962.1| - 7.8e-37 126.0 0.3 2e-36 124.7 0.1 1.7 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|407465080|ref|YP_006775962.1| - 2.1e-15 56.8 2.9 2.4e-15 56.6 1.0 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.6 gi|407465080|ref|YP_006775962.1| - 1.2e-05 25.1 1.1 2.7e-05 24.0 1.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 4 NIF3 PF01784.18 gi|407465080|ref|YP_006775962.1| - 0.092 12.4 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 NIF3 (NGG1p interacting factor 3) FBPase_3 PF01950.16 gi|407465081|ref|YP_006775963.1| - 9.7e-152 505.3 0.1 1.1e-151 505.1 0.1 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase DUF1989 PF09347.10 gi|407465081|ref|YP_006775963.1| - 0.11 12.1 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) MASE3 PF17159.4 gi|407465082|ref|YP_006775964.1| - 0.00068 19.3 1.5 0.00098 18.8 1.5 1.2 1 0 0 1 1 1 1 Membrane-associated sensor domain MFS_1 PF07690.16 gi|407465082|ref|YP_006775964.1| - 0.0018 17.3 2.0 0.002 17.1 2.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily YrhC PF14143.6 gi|407465082|ref|YP_006775964.1| - 0.013 15.6 1.9 0.028 14.5 1.9 1.6 1 0 0 1 1 1 0 YrhC-like protein FeoB_C PF07664.12 gi|407465082|ref|YP_006775964.1| - 0.67 9.7 0.1 0.67 9.7 0.1 2.3 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus DNA_ligase_A_M PF01068.21 gi|407465083|ref|YP_006775965.1| - 5.9e-60 202.4 2.0 1.5e-59 201.1 2.0 1.7 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|407465083|ref|YP_006775965.1| - 4.7e-36 124.7 1.3 6.5e-36 124.3 0.5 1.7 2 0 0 2 2 2 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|407465083|ref|YP_006775965.1| - 3.4e-21 75.7 0.0 7.3e-21 74.6 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|407465083|ref|YP_006775965.1| - 1.1e-07 32.2 0.5 2.5e-07 31.1 0.5 1.6 1 0 0 1 1 1 1 RNA ligase mRNA_cap_enzyme PF01331.19 gi|407465083|ref|YP_006775965.1| - 0.007 16.2 0.6 0.16 11.8 0.6 3.0 1 1 0 1 1 1 1 mRNA capping enzyme, catalytic domain PhoU_div PF01865.16 gi|407465084|ref|YP_006775966.1| - 5.7e-19 68.3 10.8 6.8e-19 68.0 10.8 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.19 gi|407465084|ref|YP_006775966.1| - 0.011 16.2 11.9 0.14 12.7 2.7 2.9 2 1 1 3 3 3 0 PhoU domain ELL PF10390.9 gi|407465084|ref|YP_006775966.1| - 0.044 13.3 0.4 0.11 12.0 0.0 1.7 2 0 0 2 2 2 0 RNA polymerase II elongation factor ELL WD40_alt PF14077.6 gi|407465084|ref|YP_006775966.1| - 0.14 12.0 0.3 0.14 12.0 0.3 2.5 3 0 0 3 3 3 0 Alternative WD40 repeat motif Lzipper-MIP1 PF14389.6 gi|407465084|ref|YP_006775966.1| - 0.79 10.1 8.6 0.44 10.9 1.9 2.8 2 2 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 MCPsignal PF00015.21 gi|407465084|ref|YP_006775966.1| - 2.2 8.1 12.1 17 5.2 10.3 2.8 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF2203 PF09969.9 gi|407465084|ref|YP_006775966.1| - 5.4 7.8 7.5 5.5 7.7 1.3 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) TSC22 PF01166.18 gi|407465084|ref|YP_006775966.1| - 6.7 7.1 7.9 1 9.8 0.2 3.3 3 1 0 3 3 3 0 TSC-22/dip/bun family CENP-H PF05837.12 gi|407465084|ref|YP_006775966.1| - 8.7 6.8 10.7 1.5 9.2 2.8 2.3 2 0 0 2 2 2 0 Centromere protein H (CENP-H) tRNA_int_endo PF01974.17 gi|407465085|ref|YP_006775967.1| - 1.5e-28 98.6 0.0 2.5e-28 97.9 0.0 1.3 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|407465085|ref|YP_006775967.1| - 8.8e-21 73.4 0.1 1.7e-20 72.4 0.1 1.5 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain Ribosomal_L22e PF01776.17 gi|407465085|ref|YP_006775967.1| - 0.04 14.3 2.7 0.065 13.6 2.7 1.3 1 0 0 1 1 1 0 Ribosomal L22e protein family adh_short PF00106.25 gi|407465088|ref|YP_006775970.1| - 2.8e-39 134.6 0.0 1.4e-31 109.5 0.0 3.2 2 1 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 gi|407465088|ref|YP_006775970.1| - 4.4e-34 118.1 0.1 2e-24 86.5 0.0 4.0 3 1 1 4 4 4 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|407465088|ref|YP_006775970.1| - 2.2e-17 63.6 0.1 4.3e-11 43.0 0.0 2.5 2 0 0 2 2 2 2 KR domain Epimerase PF01370.21 gi|407465088|ref|YP_006775970.1| - 0.00011 21.8 0.0 0.00072 19.1 0.0 2.3 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 gi|407465088|ref|YP_006775970.1| - 0.0011 19.5 0.3 0.0062 17.1 0.2 2.4 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Polysacc_synt_2 PF02719.15 gi|407465088|ref|YP_006775970.1| - 0.042 13.0 0.2 0.099 11.8 0.1 1.6 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein 3HCDH_N PF02737.18 gi|407465088|ref|YP_006775970.1| - 0.081 12.8 1.9 0.088 12.7 0.2 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|407465088|ref|YP_006775970.1| - 0.1 12.7 0.1 0.88 9.6 0.1 2.3 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Gal4_dimer PF03902.13 gi|407465089|ref|YP_006775971.1| - 0.086 13.0 0.0 0.26 11.5 0.0 1.8 1 1 0 1 1 1 0 Gal4-like dimerisation domain TauE PF01925.19 gi|407465090|ref|YP_006775972.1| - 3e-53 180.9 32.7 3.5e-53 180.7 32.7 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE CCB1 PF12046.8 gi|407465090|ref|YP_006775972.1| - 0.2 11.0 2.6 0.72 9.2 0.1 2.2 2 0 0 2 2 2 0 Cofactor assembly of complex C subunit B DUF192 PF02643.15 gi|407465092|ref|YP_006775974.1| - 2.9e-29 101.0 0.0 4.1e-29 100.6 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 Fe_dep_repress PF01325.19 gi|407465094|ref|YP_006775976.1| - 1.9e-19 69.6 0.4 3.2e-19 68.9 0.4 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|407465094|ref|YP_006775976.1| - 1.9e-15 56.7 0.0 3.6e-15 55.8 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain DUF4423 PF14394.6 gi|407465094|ref|YP_006775976.1| - 3.9e-06 26.7 0.0 5.5e-05 22.9 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4423) HTH_12 PF08461.10 gi|407465094|ref|YP_006775976.1| - 0.00018 21.4 0.0 0.00042 20.2 0.0 1.7 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain TrmB PF01978.19 gi|407465094|ref|YP_006775976.1| - 0.00019 21.2 0.0 0.00035 20.4 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|407465094|ref|YP_006775976.1| - 0.0002 21.2 0.0 0.00057 19.7 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_45 PF14947.6 gi|407465094|ref|YP_006775976.1| - 0.00021 21.2 1.7 0.00036 20.5 0.5 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|407465094|ref|YP_006775976.1| - 0.00077 19.3 0.0 0.0012 18.7 0.0 1.3 1 0 0 1 1 1 1 MarR family LexA_DNA_bind PF01726.16 gi|407465094|ref|YP_006775976.1| - 0.0015 18.2 0.0 0.0048 16.6 0.0 1.8 2 0 0 2 2 2 1 LexA DNA binding domain HTH_27 PF13463.6 gi|407465094|ref|YP_006775976.1| - 0.0022 18.4 0.0 0.009 16.5 0.0 2.0 2 1 0 2 2 2 1 Winged helix DNA-binding domain HipN PF18253.1 gi|407465094|ref|YP_006775976.1| - 0.0025 17.4 0.1 0.0052 16.4 0.1 1.5 1 0 0 1 1 1 1 Hsp70-interacting protein N N-terminal domain HTH_24 PF13412.6 gi|407465094|ref|YP_006775976.1| - 0.0032 17.0 0.0 0.007 15.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|407465094|ref|YP_006775976.1| - 0.0039 17.1 0.0 0.0066 16.4 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain DUF2250 PF10007.9 gi|407465094|ref|YP_006775976.1| - 0.0054 16.8 0.1 0.011 15.8 0.1 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_6 PF01418.17 gi|407465094|ref|YP_006775976.1| - 0.0079 16.2 0.0 0.021 14.8 0.0 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain, rpiR family WYL_3 PF18488.1 gi|407465094|ref|YP_006775976.1| - 0.019 15.3 0.1 0.11 12.9 0.1 2.1 2 0 0 2 2 2 0 WYL domain HTH_5 PF01022.20 gi|407465094|ref|YP_006775976.1| - 0.024 14.5 0.1 0.056 13.3 0.0 1.7 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HemN_C PF06969.16 gi|407465094|ref|YP_006775976.1| - 0.035 14.2 0.1 1.4 9.1 0.0 2.5 2 0 0 2 2 2 0 HemN C-terminal domain HTH_IclR PF09339.10 gi|407465094|ref|YP_006775976.1| - 0.037 13.8 0.3 0.081 12.7 0.0 1.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|407465094|ref|YP_006775976.1| - 0.063 13.6 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PAX PF00292.18 gi|407465094|ref|YP_006775976.1| - 0.12 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 'Paired box' domain T2SSE PF00437.20 gi|407465095|ref|YP_006775977.1| - 3.4e-11 42.7 0.0 5.9e-11 41.9 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.29 gi|407465095|ref|YP_006775977.1| - 2.1e-08 33.9 0.2 9.1e-08 31.8 0.2 2.1 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 gi|407465095|ref|YP_006775977.1| - 9.7e-07 28.5 1.3 2.5e-06 27.2 0.2 2.3 3 0 0 3 3 1 1 KH domain KH_5 PF13184.6 gi|407465095|ref|YP_006775977.1| - 1.3e-05 25.2 0.2 5.7e-05 23.1 0.2 2.2 1 0 0 1 1 1 1 NusA-like KH domain PIN_4 PF13638.6 gi|407465095|ref|YP_006775977.1| - 0.00014 22.1 0.3 0.00041 20.6 0.1 2.0 2 0 0 2 2 1 1 PIN domain AAA_16 PF13191.6 gi|407465095|ref|YP_006775977.1| - 0.00016 22.1 0.0 0.00036 21.0 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|407465095|ref|YP_006775977.1| - 0.00031 20.8 0.1 0.0058 16.7 0.0 2.8 2 1 1 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|407465095|ref|YP_006775977.1| - 0.0011 19.2 0.1 0.051 13.9 0.0 2.9 3 0 0 3 3 3 1 AAA domain AAA_18 PF13238.6 gi|407465095|ref|YP_006775977.1| - 0.0014 19.2 0.0 0.0085 16.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 gi|407465095|ref|YP_006775977.1| - 0.0018 18.6 0.0 0.0033 17.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF5615 PF18480.1 gi|407465095|ref|YP_006775977.1| - 0.0022 17.7 0.9 2.7 7.8 0.0 3.3 3 0 0 3 3 3 1 Domain of unknown function (DUF5615) PIN PF01850.21 gi|407465095|ref|YP_006775977.1| - 0.0038 17.7 0.0 0.015 15.8 0.0 2.1 1 1 0 1 1 1 1 PIN domain IstB_IS21 PF01695.17 gi|407465095|ref|YP_006775977.1| - 0.0048 16.6 0.0 0.011 15.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 gi|407465095|ref|YP_006775977.1| - 0.0065 16.1 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|407465095|ref|YP_006775977.1| - 0.007 15.4 0.0 0.013 14.5 0.0 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB PIN_9 PF18477.1 gi|407465095|ref|YP_006775977.1| - 0.0071 16.6 0.2 0.48 10.7 0.2 2.7 1 1 0 1 1 1 1 PIN like domain ABC_tran PF00005.27 gi|407465095|ref|YP_006775977.1| - 0.009 16.5 0.0 0.033 14.7 0.0 2.0 1 0 0 1 1 1 1 ABC transporter AAA_30 PF13604.6 gi|407465095|ref|YP_006775977.1| - 0.017 14.8 0.0 0.039 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|407465095|ref|YP_006775977.1| - 0.022 13.9 0.0 0.045 12.9 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain Viral_helicase1 PF01443.18 gi|407465095|ref|YP_006775977.1| - 0.029 14.1 0.0 0.055 13.2 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Zeta_toxin PF06414.12 gi|407465095|ref|YP_006775977.1| - 0.033 13.4 0.1 0.077 12.3 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_29 PF13555.6 gi|407465095|ref|YP_006775977.1| - 0.046 13.5 0.1 0.12 12.1 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain NTPase_1 PF03266.15 gi|407465095|ref|YP_006775977.1| - 0.055 13.4 0.0 0.17 11.8 0.0 1.9 1 0 0 1 1 1 0 NTPase KTI12 PF08433.10 gi|407465095|ref|YP_006775977.1| - 0.065 12.7 0.0 0.14 11.6 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_33 PF13671.6 gi|407465095|ref|YP_006775977.1| - 0.091 12.9 0.2 0.22 11.7 0.2 1.6 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 gi|407465095|ref|YP_006775977.1| - 0.11 12.5 0.0 0.27 11.3 0.0 1.9 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain NACHT PF05729.12 gi|407465095|ref|YP_006775977.1| - 0.11 12.4 0.1 0.24 11.3 0.1 1.5 1 0 0 1 1 1 0 NACHT domain Response_reg PF00072.24 gi|407465096|ref|YP_006775978.1| - 1.3e-25 89.7 1.9 1.5e-25 89.5 1.9 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Hpt PF01627.23 gi|407465097|ref|YP_006775979.1| - 0.0082 16.4 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Hpt domain HATPase_c PF02518.26 gi|407465098|ref|YP_006775980.1| - 2.7e-29 101.9 0.1 6.7e-29 100.7 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|407465098|ref|YP_006775980.1| - 3.4e-15 55.8 5.7 1.5e-14 53.7 0.2 3.3 4 0 0 4 4 4 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|407465098|ref|YP_006775980.1| - 4.5e-07 30.1 0.0 1.3e-06 28.7 0.0 1.9 1 0 0 1 1 1 1 HAMP domain HATPase_c_3 PF13589.6 gi|407465098|ref|YP_006775980.1| - 1.4e-06 28.2 0.3 8.2e-06 25.7 0.1 2.5 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|407465098|ref|YP_006775980.1| - 0.0068 16.4 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Propeptide_C25 PF08126.11 gi|407465098|ref|YP_006775980.1| - 0.047 12.8 2.1 0.75 8.9 0.6 2.4 1 1 1 2 2 2 0 Propeptide_C25 KH_5 PF13184.6 gi|407465098|ref|YP_006775980.1| - 0.086 12.9 3.1 1.5 8.9 0.4 3.6 2 1 0 2 2 2 0 NusA-like KH domain PmbA_TldD PF01523.16 gi|407465099|ref|YP_006775981.1| - 2.5e-55 188.3 0.0 3.1e-55 188.0 0.0 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase UDG PF03167.19 gi|407465100|ref|YP_006775982.1| - 4e-41 140.6 0.0 5e-41 140.3 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Pur_DNA_glyco PF02245.16 gi|407465101|ref|YP_006775983.1| - 5.4e-64 214.8 0.0 6.7e-64 214.5 0.0 1.0 1 0 0 1 1 1 1 Methylpurine-DNA glycosylase (MPG) SNARE_assoc PF09335.11 gi|407465102|ref|YP_006775984.1| - 5e-16 59.3 0.9 5e-16 59.3 0.9 1.9 2 1 0 2 2 2 1 SNARE associated Golgi protein Mannosyl_trans4 PF15971.5 gi|407465102|ref|YP_006775984.1| - 0.023 14.6 0.0 0.059 13.2 0.0 1.7 1 0 0 1 1 1 0 DolP-mannose mannosyltransferase DUF1454 PF07305.12 gi|407465103|ref|YP_006775985.1| - 0.1 12.1 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1454) Cauli_DNA-bind PF03310.13 gi|407465104|ref|YP_006775986.1| - 0.054 13.6 3.9 0.066 13.3 3.5 1.4 1 1 0 1 1 1 0 Caulimovirus DNA-binding protein ABC_tran PF00005.27 gi|407465105|ref|YP_006775987.1| - 6.8e-27 94.6 0.0 9.3e-27 94.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|407465105|ref|YP_006775987.1| - 3.4e-17 62.7 0.1 5.3e-17 62.1 0.1 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|407465105|ref|YP_006775987.1| - 1.1e-06 28.8 0.8 1.6e-05 24.9 0.1 2.2 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|407465105|ref|YP_006775987.1| - 0.00013 21.5 1.1 0.002 17.6 2.0 2.0 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain PRK PF00485.18 gi|407465105|ref|YP_006775987.1| - 0.017 14.9 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 gi|407465105|ref|YP_006775987.1| - 0.11 13.0 0.0 0.19 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain KH_5 PF13184.6 gi|407465106|ref|YP_006775988.1| - 0.024 14.7 0.0 0.051 13.7 0.0 1.6 1 0 0 1 1 1 0 NusA-like KH domain tRNA-synt_2 PF00152.20 gi|407465107|ref|YP_006775989.1| - 8.2e-90 301.1 0.1 1.2e-89 300.6 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|407465107|ref|YP_006775989.1| - 2.2e-11 43.5 1.2 4.2e-11 42.7 1.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|407465107|ref|YP_006775989.1| - 0.0011 18.5 0.2 0.14 11.6 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) YbaB_DNA_bd PF02575.16 gi|407465107|ref|YP_006775989.1| - 0.06 13.6 0.1 0.15 12.3 0.1 1.6 1 0 0 1 1 1 0 YbaB/EbfC DNA-binding family E1-E2_ATPase PF00122.20 gi|407465109|ref|YP_006775991.1| - 0.0051 16.4 0.4 0.0059 16.2 0.4 1.1 1 0 0 1 1 1 1 E1-E2 ATPase Fil_haemagg PF05594.14 gi|407465110|ref|YP_006775992.1| - 0.0029 18.1 20.5 0.086 13.4 5.8 3.8 1 1 1 2 2 2 2 Haemagluttinin repeat SnoaL_2 PF12680.7 gi|407465111|ref|YP_006775993.1| - 3.4e-11 43.7 0.0 3.9e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|407465111|ref|YP_006775993.1| - 1.1e-07 32.2 0.0 1.4e-07 31.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL PF07366.12 gi|407465111|ref|YP_006775993.1| - 3.3e-05 23.7 0.2 0.00013 21.7 0.2 1.8 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase LEH PF07858.12 gi|407465111|ref|YP_006775993.1| - 0.0019 18.3 0.1 0.016 15.3 0.1 2.0 1 1 0 1 1 1 1 Limonene-1,2-epoxide hydrolase catalytic domain VapB_antitoxin PF09957.9 gi|407465112|ref|YP_006775994.1| - 0.049 13.6 1.2 0.054 13.4 0.2 1.7 2 0 0 2 2 2 0 Bacterial antitoxin of type II TA system, VapB Iso_dh PF00180.20 gi|407465113|ref|YP_006775995.1| - 1.4e-100 336.8 0.4 1.6e-100 336.6 0.4 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase PdxA PF04166.12 gi|407465113|ref|YP_006775995.1| - 0.0011 18.5 0.0 0.0023 17.4 0.0 1.5 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA SeqA_N PF17206.3 gi|407465113|ref|YP_006775995.1| - 0.062 12.6 0.1 0.66 9.3 0.0 2.6 2 1 0 2 2 2 0 SeqA protein N-terminal domain HMGL-like PF00682.19 gi|407465114|ref|YP_006775996.1| - 8.1e-87 291.1 0.4 1.3e-86 290.4 0.5 1.4 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|407465114|ref|YP_006775996.1| - 6.4e-29 100.5 1.3 1.2e-28 99.7 1.3 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain DUF4147 PF13660.6 gi|407465114|ref|YP_006775996.1| - 0.025 14.1 0.0 0.05 13.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4147) ALS_ss_C PF10369.9 gi|407465115|ref|YP_006775997.1| - 4.9e-24 84.3 0.1 6.8e-22 77.5 0.0 2.3 2 0 0 2 2 2 2 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|407465115|ref|YP_006775997.1| - 2.7e-14 52.8 0.0 4.9e-14 51.9 0.0 1.5 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|407465115|ref|YP_006775997.1| - 1e-13 50.7 0.0 2.1e-13 49.8 0.0 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|407465115|ref|YP_006775997.1| - 0.0046 17.5 0.1 0.014 16.0 0.1 1.9 1 1 0 1 1 1 1 ACT domain TipAS PF07739.13 gi|407465115|ref|YP_006775997.1| - 0.12 12.9 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 TipAS antibiotic-recognition domain TPP_enzyme_N PF02776.18 gi|407465116|ref|YP_006775998.1| - 1.6e-60 203.6 0.1 1.1e-57 194.4 0.1 2.5 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|407465116|ref|YP_006775998.1| - 4.2e-47 159.8 0.6 1.9e-46 157.6 0.1 2.4 3 1 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|407465116|ref|YP_006775998.1| - 9.9e-47 158.1 0.1 2.1e-46 157.0 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_M_2 PF16582.5 gi|407465116|ref|YP_006775998.1| - 0.0075 16.0 0.0 0.016 15.0 0.0 1.5 1 1 0 1 1 1 1 Middle domain of thiamine pyrophosphate SnoaL_3 PF13474.6 gi|407465117|ref|YP_006775999.1| - 5.9e-07 29.8 0.0 7e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain CaMKII_AD PF08332.10 gi|407465117|ref|YP_006775999.1| - 0.00022 21.4 0.0 0.00043 20.4 0.0 1.5 1 1 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II association domain DUF4440 PF14534.6 gi|407465117|ref|YP_006775999.1| - 0.0067 16.8 0.0 0.008 16.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) DeoC PF01791.9 gi|407465118|ref|YP_006776000.1| - 1.2e-21 77.4 0.0 1.5e-21 77.1 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase DUF5563 PF17718.1 gi|407465118|ref|YP_006776000.1| - 0.016 14.8 1.5 0.023 14.3 1.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5563) Ribosomal_S21 PF01165.20 gi|407465118|ref|YP_006776000.1| - 0.082 12.6 0.1 0.19 11.5 0.1 1.6 1 0 0 1 1 1 0 Ribosomal protein S21 ThiG PF05690.14 gi|407465118|ref|YP_006776000.1| - 0.097 12.0 0.0 0.21 10.9 0.0 1.6 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG ADH_N PF08240.12 gi|407465119|ref|YP_006776001.1| - 1.4e-22 79.6 2.0 2.7e-22 78.7 2.0 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|407465119|ref|YP_006776001.1| - 1.8e-19 70.0 0.0 3.1e-19 69.3 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|407465119|ref|YP_006776001.1| - 1.2e-11 44.5 0.0 1.7e-11 44.0 0.0 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 gi|407465119|ref|YP_006776001.1| - 3.9e-06 28.0 0.1 6.2e-06 27.3 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Zn-ribbon_8 PF09723.10 gi|407465119|ref|YP_006776001.1| - 3 8.0 7.8 20 5.4 0.0 2.6 2 0 0 2 2 2 0 Zinc ribbon domain ATP-synt_F PF01990.17 gi|407465120|ref|YP_006776002.1| - 1.6e-12 47.6 0.1 2.1e-12 47.2 0.1 1.1 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit MMR_HSR1 PF01926.23 gi|407465120|ref|YP_006776002.1| - 0.0071 16.4 0.1 0.01 15.9 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Herpes_U55 PF06501.11 gi|407465121|ref|YP_006776003.1| - 0.11 11.2 0.0 0.14 11.0 0.0 1.0 1 0 0 1 1 1 0 Human herpesvirus U55 protein SWIM PF04434.17 gi|407465123|ref|YP_006776005.1| - 0.0047 16.6 0.3 0.0076 15.9 0.3 1.3 1 0 0 1 1 1 1 SWIM zinc finger Metallophos PF00149.28 gi|407465124|ref|YP_006776006.1| - 1.9e-09 38.3 0.2 7.5e-09 36.4 0.2 2.0 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|407465124|ref|YP_006776006.1| - 4.4e-06 27.0 0.0 6.6e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Zn-ribbon_8 PF09723.10 gi|407465125|ref|YP_006776007.1| - 0.02 15.0 0.6 0.046 13.8 0.6 1.5 1 0 0 1 1 1 0 Zinc ribbon domain HypA PF01155.19 gi|407465125|ref|YP_006776007.1| - 0.081 12.9 0.5 0.13 12.3 0.5 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2513 PF10711.9 gi|407465125|ref|YP_006776007.1| - 0.11 12.8 0.0 0.22 11.8 0.0 1.6 1 1 0 1 1 1 0 Hypothetical protein (DUF2513) HxlR PF01638.17 gi|407465125|ref|YP_006776007.1| - 0.15 11.9 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Elf1 PF05129.13 gi|407465125|ref|YP_006776007.1| - 0.2 11.7 0.2 0.2 11.7 0.2 2.0 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zinc_ribbon_4 PF13717.6 gi|407465125|ref|YP_006776007.1| - 0.61 10.1 4.5 20 5.2 5.1 2.4 1 1 1 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|407465125|ref|YP_006776007.1| - 0.74 9.8 3.8 4.3 7.4 0.8 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DUF4379 PF14311.6 gi|407465125|ref|YP_006776007.1| - 1.5 9.3 5.8 3 8.3 5.8 1.6 1 1 0 1 1 1 0 Probable Zinc-ribbon domain GATase PF00117.28 gi|407465126|ref|YP_006776008.1| - 1.4e-45 155.4 0.1 2.6e-45 154.5 0.0 1.5 2 0 0 2 2 2 1 Glutamine amidotransferase class-I CPSase_sm_chain PF00988.22 gi|407465126|ref|YP_006776008.1| - 9.8e-37 125.6 0.0 2.1e-36 124.6 0.0 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain Peptidase_C26 PF07722.13 gi|407465126|ref|YP_006776008.1| - 8.9e-08 32.1 0.8 2e-05 24.5 0.7 2.6 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 gi|407465126|ref|YP_006776008.1| - 0.02 14.7 0.0 0.048 13.5 0.0 1.7 1 1 0 1 1 1 0 DJ-1/PfpI family TcdB_N PF12918.7 gi|407465126|ref|YP_006776008.1| - 0.12 12.7 0.0 0.28 11.5 0.0 1.7 1 0 0 1 1 1 0 TcdB toxin N-terminal helical domain AAA PF00004.29 gi|407465127|ref|YP_006776009.1| - 4.3e-38 130.7 0.0 1.6e-37 128.9 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MIT PF04212.18 gi|407465127|ref|YP_006776009.1| - 1.2e-09 38.1 0.3 3.1e-09 36.8 0.3 1.7 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_2 PF07724.14 gi|407465127|ref|YP_006776009.1| - 1.9e-07 31.4 0.0 4.5e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) Vps4_C PF09336.10 gi|407465127|ref|YP_006776009.1| - 1.5e-06 28.1 0.2 4.5e-05 23.4 0.0 2.4 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_22 PF13401.6 gi|407465127|ref|YP_006776009.1| - 7e-06 26.4 0.1 0.00064 20.0 0.0 2.8 2 1 0 2 2 2 1 AAA domain AAA_lid_3 PF17862.1 gi|407465127|ref|YP_006776009.1| - 9.3e-06 25.4 0.0 2.3e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 gi|407465127|ref|YP_006776009.1| - 1e-05 26.0 0.0 0.0065 16.9 0.0 2.9 2 1 1 3 3 3 1 AAA ATPase domain RuvB_N PF05496.12 gi|407465127|ref|YP_006776009.1| - 7.6e-05 22.5 0.0 0.0002 21.1 0.0 1.8 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_24 PF13479.6 gi|407465127|ref|YP_006776009.1| - 0.00024 20.9 0.0 0.00047 19.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|407465127|ref|YP_006776009.1| - 0.0003 21.0 0.1 0.031 14.4 0.0 2.7 3 0 0 3 3 2 1 AAA domain AAA_7 PF12775.7 gi|407465127|ref|YP_006776009.1| - 0.0009 18.8 0.0 0.0018 17.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_5 PF07728.14 gi|407465127|ref|YP_006776009.1| - 0.0016 18.5 0.1 0.018 15.1 0.1 2.7 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 gi|407465127|ref|YP_006776009.1| - 0.0042 17.0 0.0 2 8.3 0.0 2.6 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea Mg_chelatase PF01078.21 gi|407465127|ref|YP_006776009.1| - 0.0052 16.2 0.1 0.012 15.0 0.1 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 gi|407465127|ref|YP_006776009.1| - 0.0095 15.5 0.2 0.033 13.7 0.1 1.8 1 1 1 2 2 2 1 AAA domain TIP49 PF06068.13 gi|407465127|ref|YP_006776009.1| - 0.0096 15.2 0.0 0.016 14.4 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain Zeta_toxin PF06414.12 gi|407465127|ref|YP_006776009.1| - 0.01 15.1 0.0 0.06 12.6 0.0 2.2 1 1 0 1 1 1 0 Zeta toxin AAA_14 PF13173.6 gi|407465127|ref|YP_006776009.1| - 0.017 15.2 0.0 0.076 13.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|407465127|ref|YP_006776009.1| - 0.018 14.8 0.0 0.033 13.9 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_11 PF13086.6 gi|407465127|ref|YP_006776009.1| - 0.03 14.1 0.2 0.16 11.7 0.0 2.2 2 1 1 3 3 3 0 AAA domain ATPase PF06745.13 gi|407465127|ref|YP_006776009.1| - 0.038 13.3 0.1 1.9 7.8 0.1 2.3 1 1 1 2 2 2 0 KaiC RNA_helicase PF00910.22 gi|407465127|ref|YP_006776009.1| - 0.06 13.7 0.1 0.44 11.0 0.0 2.5 3 0 0 3 3 2 0 RNA helicase KAP_NTPase PF07693.14 gi|407465127|ref|YP_006776009.1| - 0.11 11.8 0.0 1.4 8.1 0.0 2.1 1 1 1 2 2 2 0 KAP family P-loop domain AAA_30 PF13604.6 gi|407465127|ref|YP_006776009.1| - 0.11 12.2 0.6 0.59 9.8 0.1 2.4 2 1 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|407465127|ref|YP_006776009.1| - 0.11 12.8 0.9 3.4 8.0 0.3 3.0 3 1 1 4 4 3 0 AAA domain PhoH PF02562.16 gi|407465127|ref|YP_006776009.1| - 0.16 11.4 0.3 0.36 10.2 0.3 1.5 1 0 0 1 1 1 0 PhoH-like protein DUF948 PF06103.11 gi|407465128|ref|YP_006776010.1| - 0.014 15.6 0.3 0.1 12.9 0.0 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 gi|407465128|ref|YP_006776010.1| - 0.53 10.3 3.0 5.1 7.2 0.4 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) DNA_topoisoIV PF00521.20 gi|407465129|ref|YP_006776011.1| - 0.16 10.8 2.8 0.19 10.6 2.1 1.4 1 1 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A TrmB PF01978.19 gi|407465130|ref|YP_006776012.1| - 7.5e-19 67.4 0.6 1.7e-16 59.8 0.2 2.6 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|407465130|ref|YP_006776012.1| - 0.0014 17.8 0.1 0.0025 17.1 0.1 1.4 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB DUF2250 PF10007.9 gi|407465130|ref|YP_006776012.1| - 0.031 14.4 0.8 0.33 11.1 0.4 2.8 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2250) PadR PF03551.14 gi|407465130|ref|YP_006776012.1| - 0.049 13.6 0.5 1.2 9.1 0.0 3.0 3 0 0 3 3 3 0 Transcriptional regulator PadR-like family HTH_54 PF18607.1 gi|407465131|ref|YP_006776013.1| - 0.028 14.5 1.1 0.028 14.5 1.1 2.3 1 1 1 2 2 2 0 ParA helix turn helix domain Cyclin_C PF02984.19 gi|407465131|ref|YP_006776013.1| - 0.14 12.3 3.1 4.7 7.3 0.2 2.8 2 1 0 2 2 2 0 Cyclin, C-terminal domain DUF5638 PF18688.1 gi|407465131|ref|YP_006776013.1| - 1.8 8.9 12.4 9.9 6.5 6.4 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5638) YjgF_endoribonc PF14588.6 gi|407465132|ref|YP_006776014.1| - 2.4e-33 115.4 0.0 2.7e-33 115.2 0.0 1.0 1 0 0 1 1 1 1 YjgF/chorismate_mutase-like, putative endoribonuclease Ribonuc_L-PSP PF01042.21 gi|407465132|ref|YP_006776014.1| - 2.5e-19 69.4 0.0 3.2e-19 69.1 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP BON PF04972.17 gi|407465132|ref|YP_006776014.1| - 0.066 13.5 0.0 14 6.1 0.0 2.4 2 0 0 2 2 2 0 BON domain MG2 PF01835.19 gi|407465133|ref|YP_006776015.1| - 2.2e-07 31.2 0.1 0.0019 18.6 0.0 2.3 2 0 0 2 2 2 2 MG2 domain Haemagg_act PF05860.13 gi|407465133|ref|YP_006776015.1| - 0.012 15.5 0.3 0.074 12.9 0.4 2.0 2 0 0 2 2 2 0 haemagglutination activity domain LRRC37AB_C PF14914.6 gi|407465133|ref|YP_006776015.1| - 0.51 10.2 3.0 2.3 8.1 0.0 2.2 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain Putative_PNPOx PF01243.20 gi|407465134|ref|YP_006776016.1| - 8.3e-08 32.3 0.0 1.3e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|407465134|ref|YP_006776016.1| - 0.00018 21.6 0.0 0.00022 21.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF2255 PF10012.9 gi|407465134|ref|YP_006776016.1| - 0.0026 17.9 0.3 0.0053 16.9 0.3 1.7 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2255) TFIIE_alpha PF02002.17 gi|407465134|ref|YP_006776016.1| - 0.0095 15.8 1.7 0.012 15.5 0.8 1.5 2 0 0 2 2 2 1 TFIIE alpha subunit F420H2_quin_red PF04075.14 gi|407465134|ref|YP_006776016.1| - 0.019 15.1 0.0 0.024 14.8 0.0 1.2 1 0 0 1 1 1 0 F420H(2)-dependent quinone reductase Pyrid_ox_like PF16242.5 gi|407465134|ref|YP_006776016.1| - 0.029 13.9 0.0 0.038 13.6 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase like TbpB_B_D PF01298.18 gi|407465134|ref|YP_006776016.1| - 0.042 14.3 0.4 0.061 13.7 0.4 1.2 1 0 0 1 1 1 0 C-lobe and N-lobe beta barrels of Tf-binding protein B DHHA1 PF02272.19 gi|407465135|ref|YP_006776017.1| - 2e-16 60.7 0.6 2e-16 60.7 0.6 2.6 3 0 0 3 3 3 1 DHHA1 domain DHH PF01368.20 gi|407465135|ref|YP_006776017.1| - 2.1e-05 24.7 1.3 5.7e-05 23.3 1.0 1.9 2 0 0 2 2 2 1 DHH family Citrate_synt PF00285.21 gi|407465137|ref|YP_006776019.1| - 4.5e-133 443.8 0.0 5.1e-133 443.6 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain UPF0146 PF03686.13 gi|407465137|ref|YP_006776019.1| - 0.016 15.1 0.0 0.081 12.8 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0146) Copper-bind PF00127.20 gi|407465140|ref|YP_006776022.1| - 1.7e-07 31.6 0.0 7e-07 29.6 0.0 2.1 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|407465140|ref|YP_006776022.1| - 0.027 14.6 0.0 0.093 12.9 0.0 1.9 1 1 0 1 1 1 0 Cupredoxin-like domain UvrC_HhH_N PF08459.11 gi|407465141|ref|YP_006776023.1| - 3.2e-45 153.8 0.0 9.1e-45 152.3 0.0 1.8 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.24 gi|407465141|ref|YP_006776023.1| - 6.2e-12 45.6 0.7 2.7e-11 43.6 0.7 2.1 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.19 gi|407465141|ref|YP_006776023.1| - 8.2e-09 34.9 1.2 2.2e-08 33.6 1.2 1.8 1 0 0 1 1 1 1 UvrB/uvrC motif LIN52 PF10044.9 gi|407465141|ref|YP_006776023.1| - 0.0086 16.8 0.9 0.08 13.7 0.7 2.6 3 0 0 3 3 3 1 Retinal tissue protein UvrA_inter PF17760.1 gi|407465142|ref|YP_006776024.1| - 1.1e-35 122.0 0.7 2.8e-35 120.7 0.3 2.0 2 0 0 2 2 1 1 UvrA interaction domain UvrA_DNA-bind PF17755.1 gi|407465142|ref|YP_006776024.1| - 7.1e-34 116.5 0.1 2.8e-31 108.1 0.0 3.4 3 0 0 3 3 3 1 UvrA DNA-binding domain ABC_tran PF00005.27 gi|407465142|ref|YP_006776024.1| - 8.8e-23 81.3 0.8 2.3e-09 37.9 0.2 4.5 3 1 0 3 3 3 3 ABC transporter SMC_N PF02463.19 gi|407465142|ref|YP_006776024.1| - 1.1e-10 41.4 1.1 0.048 13.1 0.0 4.2 3 1 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|407465142|ref|YP_006776024.1| - 1.2e-07 32.3 0.1 0.052 13.9 0.0 3.6 3 1 0 3 3 3 2 AAA ATPase domain AAA_29 PF13555.6 gi|407465142|ref|YP_006776024.1| - 1.7e-07 30.9 0.3 0.022 14.5 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|407465142|ref|YP_006776024.1| - 1.8e-07 31.3 5.9 0.063 13.1 0.0 4.2 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|407465142|ref|YP_006776024.1| - 3.3e-06 27.1 0.5 0.049 13.5 0.2 2.8 2 0 0 2 2 2 2 RsgA GTPase NB-ARC PF00931.22 gi|407465142|ref|YP_006776024.1| - 4.1e-06 26.2 0.0 0.078 12.2 0.0 3.9 4 0 0 4 4 4 2 NB-ARC domain AAA_22 PF13401.6 gi|407465142|ref|YP_006776024.1| - 5.6e-05 23.4 1.3 0.36 11.1 0.0 4.0 5 0 0 5 5 4 2 AAA domain AAA_14 PF13173.6 gi|407465142|ref|YP_006776024.1| - 6.2e-05 23.0 0.0 0.61 10.1 0.0 3.5 3 0 0 3 3 3 2 AAA domain AAA_33 PF13671.6 gi|407465142|ref|YP_006776024.1| - 6.2e-05 23.2 0.1 0.26 11.4 0.0 3.2 3 0 0 3 3 3 2 AAA domain AAA_15 PF13175.6 gi|407465142|ref|YP_006776024.1| - 6.8e-05 22.7 9.5 0.081 12.6 0.1 4.6 3 2 1 5 5 5 1 AAA ATPase domain AAA_25 PF13481.6 gi|407465142|ref|YP_006776024.1| - 0.00011 21.8 0.1 0.35 10.4 0.0 3.4 3 0 0 3 3 3 2 AAA domain AAA_18 PF13238.6 gi|407465142|ref|YP_006776024.1| - 0.00033 21.2 0.3 1.6 9.3 0.1 3.3 3 0 0 3 3 2 2 AAA domain Viral_helicase1 PF01443.18 gi|407465142|ref|YP_006776024.1| - 0.0004 20.2 0.0 0.046 13.4 0.1 2.6 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_23 PF13476.6 gi|407465142|ref|YP_006776024.1| - 0.00077 20.0 9.5 0.0019 18.7 0.1 3.4 4 0 0 4 4 3 1 AAA domain APS_kinase PF01583.20 gi|407465142|ref|YP_006776024.1| - 0.0009 19.2 0.2 1.6 8.6 0.0 2.6 2 0 0 2 2 2 2 Adenylylsulphate kinase cobW PF02492.19 gi|407465142|ref|YP_006776024.1| - 0.001 18.7 1.0 0.29 10.7 0.1 2.9 3 0 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 gi|407465142|ref|YP_006776024.1| - 0.0016 18.4 0.0 1.2 9.0 0.0 2.4 2 0 0 2 2 2 1 NACHT domain ATPase PF06745.13 gi|407465142|ref|YP_006776024.1| - 0.0027 17.1 0.0 1.4 8.3 0.0 2.8 2 0 0 2 2 2 1 KaiC MMR_HSR1 PF01926.23 gi|407465142|ref|YP_006776024.1| - 0.0031 17.6 0.5 0.28 11.3 0.1 3.0 3 0 0 3 3 2 1 50S ribosome-binding GTPase ATPase_2 PF01637.18 gi|407465142|ref|YP_006776024.1| - 0.0038 17.2 0.6 4 7.3 0.0 3.3 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea T2SSE PF00437.20 gi|407465142|ref|YP_006776024.1| - 0.0045 16.1 0.1 3.1 6.8 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein DUF2075 PF09848.9 gi|407465142|ref|YP_006776024.1| - 0.0056 16.0 0.1 3.3 6.8 0.1 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 gi|407465142|ref|YP_006776024.1| - 0.0099 15.4 0.1 1.1 8.7 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|407465142|ref|YP_006776024.1| - 0.01 16.2 0.0 2.9 8.3 0.0 3.0 2 0 0 2 2 2 1 RNA helicase MeaB PF03308.16 gi|407465142|ref|YP_006776024.1| - 0.01 14.8 0.1 0.47 9.4 0.0 3.0 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NTPase_1 PF03266.15 gi|407465142|ref|YP_006776024.1| - 0.013 15.5 1.9 1.7 8.5 0.0 3.9 3 0 0 3 3 3 0 NTPase DnaJ_CXXCXGXG PF00684.19 gi|407465142|ref|YP_006776024.1| - 0.018 15.4 0.3 0.018 15.4 0.3 4.1 4 1 0 4 4 3 0 DnaJ central domain Zeta_toxin PF06414.12 gi|407465142|ref|YP_006776024.1| - 0.022 14.1 0.0 3.6 6.8 0.0 2.8 3 0 0 3 3 3 0 Zeta toxin PRK PF00485.18 gi|407465142|ref|YP_006776024.1| - 0.023 14.4 0.5 0.45 10.2 0.1 2.7 3 0 0 3 3 2 0 Phosphoribulokinase / Uridine kinase family zinc_ribbon_2 PF13240.6 gi|407465142|ref|YP_006776024.1| - 0.029 14.1 2.9 1.4 8.8 0.1 2.8 2 0 0 2 2 2 0 zinc-ribbon domain AAA_24 PF13479.6 gi|407465142|ref|YP_006776024.1| - 0.04 13.7 4.5 20 4.8 0.0 4.2 4 0 0 4 4 4 0 AAA domain AAA_30 PF13604.6 gi|407465142|ref|YP_006776024.1| - 0.059 13.1 0.1 14 5.4 0.0 2.8 3 0 0 3 3 3 0 AAA domain Septin PF00735.18 gi|407465142|ref|YP_006776024.1| - 0.064 12.5 0.1 0.42 9.9 0.0 2.2 2 0 0 2 2 2 0 Septin RACo_linker PF17650.1 gi|407465142|ref|YP_006776024.1| - 0.075 12.9 0.3 11 5.9 0.0 3.5 4 0 0 4 4 3 0 RACo linker region MobB PF03205.14 gi|407465142|ref|YP_006776024.1| - 0.096 12.6 0.1 7.6 6.4 0.1 2.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B dNK PF01712.19 gi|407465142|ref|YP_006776024.1| - 0.12 12.2 0.1 7.3 6.4 0.1 2.7 2 0 0 2 2 2 0 Deoxynucleoside kinase AAA_28 PF13521.6 gi|407465142|ref|YP_006776024.1| - 0.13 12.5 0.1 23 5.2 0.0 2.7 2 0 0 2 2 2 0 AAA domain UvrB_inter PF17757.1 gi|407465143|ref|YP_006776025.1| - 1.6e-29 101.9 1.3 6.8e-29 99.9 0.4 2.4 2 0 0 2 2 2 1 UvrB interaction domain UvrB PF12344.8 gi|407465143|ref|YP_006776025.1| - 3.1e-21 74.9 5.4 7.8e-21 73.7 5.4 1.7 1 0 0 1 1 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|407465143|ref|YP_006776025.1| - 6.5e-20 71.5 1.3 5e-19 68.7 0.2 2.8 3 0 0 3 3 3 1 Helicase conserved C-terminal domain UVR PF02151.19 gi|407465143|ref|YP_006776025.1| - 4.3e-09 35.8 6.0 7.9e-09 35.0 4.3 2.5 2 0 0 2 2 2 1 UvrB/uvrC motif ResIII PF04851.15 gi|407465143|ref|YP_006776025.1| - 4.4e-08 33.3 4.0 1.1e-07 32.0 0.0 3.1 3 1 1 4 4 4 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|407465143|ref|YP_006776025.1| - 8.1e-07 29.0 0.5 0.00022 21.1 0.1 3.4 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|407465143|ref|YP_006776025.1| - 0.00069 19.4 0.0 0.017 14.9 0.0 2.6 3 0 0 3 3 3 1 AAA domain AAA_19 PF13245.6 gi|407465143|ref|YP_006776025.1| - 0.011 16.0 1.6 6.1 7.2 0.1 2.8 2 0 0 2 2 2 0 AAA domain Rhomboid_N PF12122.8 gi|407465143|ref|YP_006776025.1| - 0.032 14.4 0.1 5 7.4 0.0 2.6 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease Met_synt_B12 PF02965.17 gi|407465143|ref|YP_006776025.1| - 0.036 13.6 0.1 0.16 11.4 0.1 2.0 2 0 0 2 2 2 0 Vitamin B12 dependent methionine synthase, activation domain AAA_22 PF13401.6 gi|407465143|ref|YP_006776025.1| - 0.037 14.3 0.4 0.37 11.1 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|407465143|ref|YP_006776025.1| - 0.11 12.7 0.4 0.34 11.1 0.0 2.1 3 0 0 3 3 3 0 AAA domain Tup_N PF08581.10 gi|407465143|ref|YP_006776025.1| - 0.3 11.4 0.1 0.3 11.4 0.1 3.3 4 0 0 4 4 2 0 Tup N-terminal Pyridox_ox_2 PF12900.7 gi|407465144|ref|YP_006776026.1| - 9.5e-21 74.3 0.0 1.2e-20 74.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|407465144|ref|YP_006776026.1| - 4.3e-09 36.4 0.0 1.3e-08 34.9 0.0 1.8 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|407465144|ref|YP_006776026.1| - 0.0062 16.1 0.0 0.46 10.1 0.0 2.2 2 0 0 2 2 2 2 Pyridoxamine 5'-phosphate oxidase like RNA_pol_Rpc34 PF05158.12 gi|407465145|ref|YP_006776027.1| - 0.017 14.5 0.0 0.017 14.5 0.0 1.4 2 0 0 2 2 2 0 RNA polymerase Rpc34 subunit tRNA_synt_2f PF02092.17 gi|407465145|ref|YP_006776027.1| - 0.037 12.9 0.5 0.043 12.8 0.5 1.1 1 0 0 1 1 1 0 Glycyl-tRNA synthetase beta subunit Bac_luciferase PF00296.20 gi|407465147|ref|YP_006776029.1| - 4.9e-54 183.9 0.0 6.4e-54 183.5 0.0 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Fe-ADH PF00465.19 gi|407465148|ref|YP_006776030.1| - 2e-49 168.3 0.0 3.1e-49 167.7 0.0 1.3 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|407465148|ref|YP_006776030.1| - 7.1e-16 58.7 0.0 9.6e-16 58.2 0.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|407465148|ref|YP_006776030.1| - 0.0057 15.8 0.0 1.3 8.2 0.0 2.2 2 0 0 2 2 2 2 3-dehydroquinate synthase DUF4147 PF13660.6 gi|407465149|ref|YP_006776031.1| - 6.6e-68 228.7 0.0 9.3e-68 228.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MOFRL PF05161.13 gi|407465149|ref|YP_006776031.1| - 1e-28 99.7 1.7 2.9e-28 98.2 0.4 2.1 2 0 0 2 2 2 1 MOFRL family Peptidase_C13 PF01650.18 gi|407465149|ref|YP_006776031.1| - 0.013 15.1 0.0 0.026 14.0 0.0 1.6 1 1 0 1 1 1 0 Peptidase C13 family Aconitase_B_N PF11791.8 gi|407465149|ref|YP_006776031.1| - 0.044 13.8 0.1 0.12 12.5 0.1 1.7 1 0 0 1 1 1 0 Aconitate B N-terminal domain RMMBL PF07521.12 gi|407465151|ref|YP_006776033.1| - 0.0041 17.0 0.0 0.01 15.7 0.0 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_3 PF13483.6 gi|407465151|ref|YP_006776033.1| - 0.052 13.4 0.0 0.14 12.1 0.0 1.7 2 0 0 2 2 2 0 Beta-lactamase superfamily domain Formyl_trans_N PF00551.19 gi|407465152|ref|YP_006776034.1| - 1.5e-47 161.7 0.1 1.7e-47 161.5 0.1 1.0 1 0 0 1 1 1 1 Formyl transferase Cupin_2 PF07883.11 gi|407465153|ref|YP_006776035.1| - 1.6e-08 34.1 0.0 2e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Cupin domain CENP-C_C PF11699.8 gi|407465153|ref|YP_006776035.1| - 2e-06 27.9 0.3 2.4e-06 27.7 0.3 1.1 1 0 0 1 1 1 1 Mif2/CENP-C like AraC_binding PF02311.19 gi|407465153|ref|YP_006776035.1| - 0.00014 21.8 0.0 0.00018 21.4 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain ARD PF03079.14 gi|407465153|ref|YP_006776035.1| - 0.015 15.4 0.5 0.023 14.9 0.2 1.4 2 0 0 2 2 2 0 ARD/ARD' family DMSP_lyase PF16867.5 gi|407465153|ref|YP_006776035.1| - 0.031 13.9 0.0 0.041 13.5 0.0 1.1 1 0 0 1 1 1 0 Dimethlysulfonioproprionate lyase Flu_M1 PF00598.19 gi|407465153|ref|YP_006776035.1| - 0.064 12.7 0.0 0.09 12.3 0.0 1.3 1 1 0 1 1 1 0 Influenza Matrix protein (M1) ABM PF03992.16 gi|407465154|ref|YP_006776036.1| - 1.6e-08 34.6 0.0 1.9e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase SOR PF07682.11 gi|407465154|ref|YP_006776036.1| - 0.013 14.5 0.0 0.013 14.4 0.0 1.0 1 0 0 1 1 1 0 Sulphur oxygenase reductase THF_DHG_CYH_C PF02882.19 gi|407465155|ref|YP_006776037.1| - 1.1e-59 200.3 0.7 1.7e-59 199.7 0.7 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|407465155|ref|YP_006776037.1| - 6.3e-41 139.3 1.1 9.9e-41 138.7 1.1 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AlaDh_PNT_C PF01262.21 gi|407465155|ref|YP_006776037.1| - 0.0026 17.1 0.0 0.005 16.2 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Semialdhyde_dh PF01118.24 gi|407465155|ref|YP_006776037.1| - 0.0046 17.4 0.0 0.015 15.8 0.0 1.7 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain OCD_Mu_crystall PF02423.15 gi|407465155|ref|YP_006776037.1| - 0.0082 15.1 0.0 0.011 14.8 0.0 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Hydrolase PF00702.26 gi|407465155|ref|YP_006776037.1| - 0.011 16.1 0.1 0.021 15.1 0.1 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Sacchrp_dh_NADP PF03435.18 gi|407465155|ref|YP_006776037.1| - 0.024 14.9 0.2 0.17 12.1 0.0 2.2 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain 5-FTHF_cyc-lig PF01812.20 gi|407465156|ref|YP_006776038.1| - 3e-39 134.8 0.0 3.4e-39 134.6 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family GARS_A PF01071.19 gi|407465157|ref|YP_006776039.1| - 2.7e-78 262.2 0.1 3.6e-78 261.8 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|407465157|ref|YP_006776039.1| - 2.5e-33 114.7 0.0 1.7e-32 112.1 0.0 2.1 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|407465157|ref|YP_006776039.1| - 4.2e-30 103.9 0.1 8.1e-30 102.9 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp PF02222.22 gi|407465157|ref|YP_006776039.1| - 4e-07 29.8 0.0 6.6e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|407465157|ref|YP_006776039.1| - 1.1e-05 25.1 0.1 1.8e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|407465157|ref|YP_006776039.1| - 1.5e-05 25.1 0.0 2.4e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|407465157|ref|YP_006776039.1| - 2e-05 24.2 0.0 3.5e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 gi|407465157|ref|YP_006776039.1| - 0.002 17.7 0.0 0.0035 16.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.11 gi|407465157|ref|YP_006776039.1| - 0.005 16.5 0.0 0.01 15.5 0.0 1.4 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_ST PF14397.6 gi|407465157|ref|YP_006776039.1| - 0.006 15.9 0.1 0.026 13.8 0.1 1.9 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp_4 PF13535.6 gi|407465157|ref|YP_006776039.1| - 0.031 13.9 0.0 0.054 13.1 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|407465157|ref|YP_006776039.1| - 0.077 12.4 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain tRNA-synt_1 PF00133.22 gi|407465158|ref|YP_006776040.1| - 1.9e-138 462.4 1.1 3.3e-138 461.6 1.1 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|407465158|ref|YP_006776040.1| - 6.3e-30 104.1 0.3 1.8e-29 102.6 0.3 1.8 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|407465158|ref|YP_006776040.1| - 4.5e-24 84.9 0.0 8.2e-10 38.0 0.0 3.3 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|407465158|ref|YP_006776040.1| - 3.2e-05 23.4 0.0 0.00047 19.6 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|407465158|ref|YP_006776040.1| - 3.7e-05 22.8 0.1 0.00011 21.3 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class I (K) Ferritin PF00210.24 gi|407465159|ref|YP_006776041.1| - 3.7e-22 78.8 0.0 5e-22 78.4 0.0 1.1 1 0 0 1 1 1 1 Ferritin-like domain PH_18 PF18469.1 gi|407465160|ref|YP_006776042.1| - 0.013 15.5 0.2 0.042 13.8 0.2 1.7 1 1 0 1 1 1 0 Pleckstrin homology domain tRNA_bind PF01588.20 gi|407465160|ref|YP_006776042.1| - 0.11 12.6 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative tRNA binding domain ATP-grasp_2 PF08442.10 gi|407465161|ref|YP_006776043.1| - 3.6e-45 154.0 2.5 5.9e-45 153.3 2.5 1.3 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|407465161|ref|YP_006776043.1| - 4.5e-15 55.8 0.3 1.2e-14 54.4 0.3 1.7 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 gi|407465161|ref|YP_006776043.1| - 5.9e-14 52.1 0.3 1.7e-13 50.5 0.3 1.7 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|407465161|ref|YP_006776043.1| - 6e-06 25.9 0.0 1.2e-05 24.9 0.0 1.6 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|407465161|ref|YP_006776043.1| - 0.0083 15.7 0.2 0.021 14.4 0.1 1.6 1 1 0 1 1 1 1 ATP-grasp domain DUF4152 PF13680.6 gi|407465161|ref|YP_006776043.1| - 0.015 14.7 1.3 0.42 10.0 0.1 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF4152) Motilin_ghrelin PF04644.12 gi|407465161|ref|YP_006776043.1| - 0.19 11.5 0.2 0.46 10.3 0.2 1.6 1 0 0 1 1 1 0 Motilin/ghrelin CoA_binding PF02629.19 gi|407465162|ref|YP_006776044.1| - 1.8e-21 76.6 1.3 1.8e-21 76.6 1.3 1.8 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 gi|407465162|ref|YP_006776044.1| - 1.1e-07 31.7 0.1 2.1e-07 30.9 0.1 1.4 1 0 0 1 1 1 1 CoA-ligase CoA_binding_2 PF13380.6 gi|407465162|ref|YP_006776044.1| - 4.7e-05 23.8 0.0 7.6e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 CoA binding domain Succ_CoA_lig PF13607.6 gi|407465162|ref|YP_006776044.1| - 0.00014 21.7 0.0 0.00022 21.0 0.0 1.3 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain GFO_IDH_MocA PF01408.22 gi|407465162|ref|YP_006776044.1| - 0.015 16.1 0.1 0.026 15.4 0.1 1.3 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Ribosomal_L40e PF01020.17 gi|407465163|ref|YP_006776045.1| - 0.01 15.7 7.3 0.026 14.4 7.2 1.7 1 1 1 2 2 2 0 Ribosomal L40e family zinc_ribbon_2 PF13240.6 gi|407465163|ref|YP_006776045.1| - 0.028 14.1 6.3 0.041 13.6 6.3 1.2 1 0 0 1 1 1 0 zinc-ribbon domain TelA PF05816.11 gi|407465164|ref|YP_006776046.1| - 0.063 12.3 0.5 0.066 12.3 0.5 1.1 1 0 0 1 1 1 0 Toxic anion resistance protein (TelA) TPR_14 PF13428.6 gi|407465164|ref|YP_006776046.1| - 0.12 13.2 0.2 0.35 11.8 0.1 1.8 1 1 1 2 2 2 0 Tetratricopeptide repeat HATPase_c PF02518.26 gi|407465165|ref|YP_006776047.1| - 2.8e-19 69.7 0.1 5.6e-19 68.7 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|407465165|ref|YP_006776047.1| - 6.5e-10 38.8 0.0 1.4e-09 37.8 0.0 1.5 1 0 0 1 1 1 1 GHKL domain HisKA PF00512.25 gi|407465165|ref|YP_006776047.1| - 1.8e-09 37.5 0.0 3.8e-09 36.4 0.0 1.4 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain DUF4242 PF14026.6 gi|407465165|ref|YP_006776047.1| - 2.6e-05 24.3 0.0 7.4e-05 22.9 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF4242) NPV_P10 PF05531.12 gi|407465165|ref|YP_006776047.1| - 0.059 13.8 2.9 0.073 13.5 0.6 2.4 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF3303 PF11746.8 gi|407465165|ref|YP_006776047.1| - 0.066 13.5 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3303) HSP33 PF01430.19 gi|407465165|ref|YP_006776047.1| - 0.17 11.3 0.2 0.3 10.5 0.2 1.3 1 0 0 1 1 1 0 Hsp33 protein PD40 PF07676.12 gi|407465166|ref|YP_006776048.1| - 0.0014 18.5 0.5 1.4 9.0 0.0 2.5 2 0 0 2 2 2 2 WD40-like Beta Propeller Repeat Dsh_C PF12316.8 gi|407465166|ref|YP_006776048.1| - 0.17 12.3 0.9 0.27 11.6 0.9 1.3 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Vfa1 PF08432.10 gi|407465166|ref|YP_006776048.1| - 0.28 11.5 9.6 0.39 11.0 9.6 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Peptidase_S49_N PF08496.10 gi|407465166|ref|YP_006776048.1| - 0.35 10.9 6.7 0.63 10.1 6.7 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal PPL5 PF18168.1 gi|407465166|ref|YP_006776048.1| - 0.48 9.7 4.9 0.7 9.1 4.9 1.1 1 0 0 1 1 1 0 Prim-pol family 5 ETRAMP PF09716.10 gi|407465166|ref|YP_006776048.1| - 1.2 9.2 3.9 4.1 7.5 3.9 1.9 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF4337 PF14235.6 gi|407465166|ref|YP_006776048.1| - 2.6 8.1 7.2 4.9 7.3 7.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) TPR_2 PF07719.17 gi|407465167|ref|YP_006776049.1| - 3.3e-37 123.6 7.6 4.2e-07 29.6 0.1 8.1 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_1 PF00515.28 gi|407465167|ref|YP_006776049.1| - 2e-36 122.3 17.1 2.7e-07 30.1 0.0 8.1 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407465167|ref|YP_006776049.1| - 2.8e-26 89.5 12.3 2.9e-05 23.9 0.0 8.1 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|407465167|ref|YP_006776049.1| - 3.3e-26 90.7 18.6 0.00059 19.5 0.2 8.0 3 1 5 8 8 8 7 TPR repeat TPR_16 PF13432.6 gi|407465167|ref|YP_006776049.1| - 3.8e-25 88.2 0.0 6.9e-07 29.8 0.0 4.7 4 1 1 5 5 5 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407465167|ref|YP_006776049.1| - 6e-25 87.5 11.2 2.6e-06 27.9 0.1 6.2 3 1 3 6 6 6 5 Tetratricopeptide repeat TPR_17 PF13431.6 gi|407465167|ref|YP_006776049.1| - 8.8e-25 85.3 10.8 0.00034 20.8 0.0 8.1 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407465167|ref|YP_006776049.1| - 1e-23 83.4 2.4 6.9e-08 32.7 0.0 5.7 2 1 5 7 7 7 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407465167|ref|YP_006776049.1| - 5.3e-20 70.4 0.0 0.00021 21.8 0.1 7.8 4 4 4 8 8 8 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|407465167|ref|YP_006776049.1| - 2.5e-15 56.5 1.1 1.3e-06 28.6 0.0 3.4 1 1 3 4 4 4 4 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 gi|407465167|ref|YP_006776049.1| - 1.7e-13 50.4 9.1 0.015 15.3 0.0 8.1 9 0 0 9 9 9 2 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 gi|407465167|ref|YP_006776049.1| - 7.7e-12 44.4 0.8 0.027 14.5 0.0 6.3 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|407465167|ref|YP_006776049.1| - 2.8e-11 43.3 3.2 0.19 12.4 0.0 7.1 8 0 0 8 8 7 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|407465167|ref|YP_006776049.1| - 3.9e-10 39.7 0.0 0.00065 19.8 0.0 3.9 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|407465167|ref|YP_006776049.1| - 8.7e-09 35.0 0.8 0.024 14.5 0.1 5.0 5 0 0 5 5 4 2 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|407465167|ref|YP_006776049.1| - 1.2e-07 31.4 1.7 9.6e-06 25.2 0.2 2.5 1 1 1 2 2 2 2 Coatomer epsilon subunit TPR_20 PF14561.6 gi|407465167|ref|YP_006776049.1| - 1.6e-06 28.3 0.1 0.53 10.7 0.0 4.4 3 2 1 4 4 4 2 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|407465167|ref|YP_006776049.1| - 3.2e-06 27.2 3.3 0.16 12.0 0.2 3.5 2 1 1 3 3 3 2 Putative TPR-like repeat NARP1 PF12569.8 gi|407465167|ref|YP_006776049.1| - 0.00012 21.2 0.9 5.2 5.9 0.0 4.0 2 1 1 4 4 4 1 NMDA receptor-regulated protein 1 PknG_TPR PF16918.5 gi|407465167|ref|YP_006776049.1| - 0.0013 17.6 0.0 0.18 10.5 0.0 2.3 2 1 1 3 3 3 1 Protein kinase G tetratricopeptide repeat TPR_21 PF09976.9 gi|407465167|ref|YP_006776049.1| - 0.0036 17.0 0.1 0.27 10.9 0.0 3.2 3 1 1 4 4 4 1 Tetratricopeptide repeat-like domain Paf67 PF10255.9 gi|407465167|ref|YP_006776049.1| - 0.026 13.5 0.0 0.066 12.2 0.0 1.7 1 0 0 1 1 1 0 RNA polymerase I-associated factor PAF67 Alkyl_sulf_dimr PF14863.6 gi|407465167|ref|YP_006776049.1| - 0.046 14.2 0.2 15 6.0 0.1 3.7 3 2 1 4 4 4 0 Alkyl sulfatase dimerisation DUF3856 PF12968.7 gi|407465167|ref|YP_006776049.1| - 0.071 13.2 0.1 3.9 7.5 0.0 3.0 2 1 0 2 2 2 0 Domain of Unknown Function (DUF3856) TPR_4 PF07721.14 gi|407465167|ref|YP_006776049.1| - 0.099 13.3 0.0 0.56 11.0 0.0 2.3 2 0 0 2 2 1 0 Tetratricopeptide repeat SUR7 PF06687.12 gi|407465167|ref|YP_006776049.1| - 0.11 12.2 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 SUR7/PalI family SHNi-TPR PF10516.9 gi|407465167|ref|YP_006776049.1| - 0.16 11.4 6.8 4.3 6.9 0.1 5.0 6 0 0 6 6 5 0 SHNi-TPR TPR_3 PF07720.12 gi|407465167|ref|YP_006776049.1| - 0.2 11.7 14.1 1.6 8.8 0.0 5.0 6 0 0 6 6 5 0 Tetratricopeptide repeat TrmB PF01978.19 gi|407465168|ref|YP_006776050.1| - 9.6e-16 57.4 0.0 2.3e-15 56.2 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|407465168|ref|YP_006776050.1| - 6.7e-06 25.8 0.0 1.5e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|407465168|ref|YP_006776050.1| - 7.9e-05 22.5 0.0 0.00015 21.6 0.0 1.4 1 0 0 1 1 1 1 MarR family DUF2250 PF10007.9 gi|407465168|ref|YP_006776050.1| - 0.0013 18.8 0.2 0.0025 17.9 0.2 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_9 PF08221.11 gi|407465168|ref|YP_006776050.1| - 0.016 15.3 0.0 0.061 13.4 0.0 2.1 1 1 1 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_20 PF12840.7 gi|407465168|ref|YP_006776050.1| - 0.046 13.8 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Regulator_TrmB PF11495.8 gi|407465168|ref|YP_006776050.1| - 0.054 12.7 0.0 0.084 12.0 0.0 1.4 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB HTH_5 PF01022.20 gi|407465168|ref|YP_006776050.1| - 0.066 13.1 0.0 0.2 11.5 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|407465168|ref|YP_006776050.1| - 0.097 13.2 0.0 0.2 12.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain Pyrophosphatase PF00719.19 gi|407465171|ref|YP_006776053.1| - 1.3e-56 190.8 0.2 1.6e-56 190.6 0.2 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase S-layer PF07752.11 gi|407465171|ref|YP_006776053.1| - 0.013 14.6 0.1 0.022 13.8 0.1 1.4 1 0 0 1 1 1 0 S-layer protein zf-UBP PF02148.19 gi|407465172|ref|YP_006776054.1| - 1.2e-11 44.8 8.7 1.2e-11 44.8 8.7 1.5 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein zf-UBP_var PF17807.1 gi|407465172|ref|YP_006776054.1| - 0.0036 17.0 0.7 0.0057 16.4 0.7 1.4 1 0 0 1 1 1 1 Variant UBP zinc finger Prok-RING_2 PF14445.6 gi|407465172|ref|YP_006776054.1| - 0.03 14.5 2.3 0.055 13.6 2.3 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 TBP PF00352.21 gi|407465173|ref|YP_006776055.1| - 2.4e-51 171.6 0.1 5e-25 87.3 0.1 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|407465173|ref|YP_006776055.1| - 5.3e-07 29.7 0.0 0.0086 16.2 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) TFIIB PF00382.19 gi|407465174|ref|YP_006776056.1| - 5.4e-33 112.9 3.9 1.8e-17 63.1 0.1 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|407465174|ref|YP_006776056.1| - 1.1e-09 37.7 1.3 1.9e-09 36.8 1.3 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|407465174|ref|YP_006776056.1| - 0.0033 16.9 0.0 0.042 13.4 0.0 2.6 3 0 0 3 3 3 1 Sigma-70, region 4 RB_B PF01857.20 gi|407465174|ref|YP_006776056.1| - 0.014 15.4 0.0 0.03 14.4 0.0 1.5 1 1 0 1 1 1 0 Retinoblastoma-associated protein B domain Cyclin_C PF02984.19 gi|407465174|ref|YP_006776056.1| - 0.02 15.0 0.1 2 8.5 0.0 2.4 1 1 1 2 2 2 0 Cyclin, C-terminal domain Sigma70_r4_2 PF08281.12 gi|407465174|ref|YP_006776056.1| - 0.029 14.1 1.4 0.31 10.8 0.0 2.9 3 0 0 3 3 3 0 Sigma-70, region 4 zinc_ribbon_2 PF13240.6 gi|407465174|ref|YP_006776056.1| - 0.033 13.9 2.3 0.22 11.3 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain HTH_AsnC-type PF13404.6 gi|407465174|ref|YP_006776056.1| - 0.039 13.8 0.0 0.2 11.5 0.0 2.1 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DZR PF12773.7 gi|407465174|ref|YP_006776056.1| - 0.058 13.4 0.3 0.15 12.1 0.3 1.7 1 0 0 1 1 1 0 Double zinc ribbon DUF294_C PF10335.9 gi|407465174|ref|YP_006776056.1| - 0.062 13.1 0.2 9 6.1 0.1 2.2 2 0 0 2 2 2 0 Putative nucleotidyltransferase substrate binding domain HTH_23 PF13384.6 gi|407465174|ref|YP_006776056.1| - 0.077 12.8 0.1 0.69 9.8 0.0 2.4 2 0 0 2 2 2 0 Homeodomain-like domain Cyclin_N PF00134.23 gi|407465174|ref|YP_006776056.1| - 0.085 12.6 0.3 0.24 11.2 0.1 1.8 2 0 0 2 2 2 0 Cyclin, N-terminal domain HTH_11 PF08279.12 gi|407465174|ref|YP_006776056.1| - 0.13 12.2 1.9 1.1 9.2 0.0 2.8 3 0 0 3 3 3 0 HTH domain A2L_zn_ribbon PF08792.10 gi|407465174|ref|YP_006776056.1| - 0.17 11.7 1.8 0.33 10.7 1.8 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain HypA PF01155.19 gi|407465174|ref|YP_006776056.1| - 0.17 11.9 1.0 0.37 10.8 0.1 2.0 2 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-NADH-PPase PF09297.11 gi|407465174|ref|YP_006776056.1| - 1.7 8.4 8.1 4.3 7.1 1.5 2.9 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-ribbon_3 PF13248.6 gi|407465174|ref|YP_006776056.1| - 2.4 7.7 4.6 26 4.4 4.6 2.3 1 1 0 1 1 1 0 zinc-ribbon domain Wzz PF02706.15 gi|407465176|ref|YP_006776058.1| - 0.9 9.9 8.2 12 6.2 2.6 2.8 2 0 0 2 2 2 0 Chain length determinant protein PvlArgDC PF01862.16 gi|407465177|ref|YP_006776059.1| - 1.4e-55 187.5 0.0 1.6e-55 187.4 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) ABC_membrane PF00664.23 gi|407465178|ref|YP_006776060.1| - 0.012 15.3 0.4 0.013 15.2 0.4 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region Phage_holin_3_6 PF07332.11 gi|407465178|ref|YP_006776060.1| - 0.09 12.8 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III RIC3 PF15361.6 gi|407465178|ref|YP_006776060.1| - 0.11 12.9 0.2 0.11 12.9 0.2 1.1 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 HRG PF16954.5 gi|407465178|ref|YP_006776060.1| - 0.17 12.3 1.6 4.9 7.6 0.0 2.2 2 0 0 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene Thioredoxin_4 PF13462.6 gi|407465179|ref|YP_006776061.1| - 4.8e-43 147.2 0.0 7.6e-43 146.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|407465179|ref|YP_006776061.1| - 6.6e-19 68.4 0.1 2.5e-16 60.1 0.1 2.2 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 gi|407465179|ref|YP_006776061.1| - 1.3e-11 44.9 0.0 2.5e-11 44.0 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_5 PF13743.6 gi|407465179|ref|YP_006776061.1| - 0.0053 16.5 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin EssA PF10661.9 gi|407465179|ref|YP_006776061.1| - 0.036 13.9 1.4 0.72 9.7 0.1 2.2 2 0 0 2 2 2 0 WXG100 protein secretion system (Wss), protein EssA PsbJ PF01788.17 gi|407465179|ref|YP_006776061.1| - 1.8 8.5 4.2 2.9 7.8 4.2 1.3 1 0 0 1 1 1 0 PsbJ DEAD PF00270.29 gi|407465180|ref|YP_006776062.1| - 3.8e-49 166.8 0.1 1.7e-48 164.7 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|407465180|ref|YP_006776062.1| - 1.1e-31 109.4 0.1 4.4e-30 104.3 0.1 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 gi|407465180|ref|YP_006776062.1| - 0.00012 21.4 0.1 0.00018 20.8 0.1 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase ResIII PF04851.15 gi|407465180|ref|YP_006776062.1| - 0.00017 21.6 0.0 0.00029 20.9 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 gi|407465180|ref|YP_006776062.1| - 0.0027 17.5 0.0 0.0061 16.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain CMS1 PF14617.6 gi|407465180|ref|YP_006776062.1| - 0.015 14.6 0.3 0.048 13.0 0.1 1.9 3 0 0 3 3 3 0 U3-containing 90S pre-ribosomal complex subunit Helicase_C_2 PF13307.6 gi|407465180|ref|YP_006776062.1| - 0.094 12.9 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 Helicase C-terminal domain AAA_19 PF13245.6 gi|407465180|ref|YP_006776062.1| - 0.1 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain Mfp-3 PF04202.13 gi|407465180|ref|YP_006776062.1| - 3.1 8.2 13.2 7 7.1 13.2 1.5 1 0 0 1 1 1 0 Foot protein 3 AsnC_trans_reg PF01037.21 gi|407465181|ref|YP_006776063.1| - 1.6e-08 34.4 0.1 1.9e-08 34.2 0.1 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain GYD PF08734.11 gi|407465181|ref|YP_006776063.1| - 0.00039 20.3 0.0 0.00044 20.2 0.0 1.1 1 0 0 1 1 1 1 GYD domain NapD PF03927.13 gi|407465181|ref|YP_006776063.1| - 0.028 14.5 0.3 0.082 13.0 0.3 1.7 1 1 0 1 1 1 0 NapD protein Guanylate_cyc PF00211.20 gi|407465182|ref|YP_006776064.1| - 1.6e-18 67.0 0.3 2.3e-18 66.5 0.3 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Usp PF00582.26 gi|407465183|ref|YP_006776065.1| - 1.6e-27 96.7 0.0 1.8e-27 96.5 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF4252 PF14060.6 gi|407465183|ref|YP_006776065.1| - 0.0018 18.2 1.3 0.0022 17.9 1.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4252) PdaC PF13739.6 gi|407465183|ref|YP_006776065.1| - 0.12 13.4 0.8 0.2 12.7 0.8 1.5 1 0 0 1 1 1 0 Deacetylase PdaC Usp PF00582.26 gi|407465184|ref|YP_006776066.1| - 7.1e-30 104.4 0.0 8.8e-30 104.1 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Glyco_hydro_36N PF16875.5 gi|407465184|ref|YP_006776066.1| - 0.02 14.5 0.0 0.025 14.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 36 N-terminal domain SDF PF00375.18 gi|407465185|ref|YP_006776067.1| - 6.8e-116 387.5 39.3 7.7e-116 387.3 39.3 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family DUF4423 PF14394.6 gi|407465186|ref|YP_006776068.1| - 2.8e-06 27.1 0.0 5.7e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_20 PF12840.7 gi|407465186|ref|YP_006776068.1| - 9e-06 25.7 0.0 1.6e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|407465186|ref|YP_006776068.1| - 0.00019 21.2 0.0 0.00078 19.3 0.0 1.9 2 0 0 2 2 2 1 MarR family DUF505 PF04458.12 gi|407465186|ref|YP_006776068.1| - 0.00052 18.5 0.0 0.00066 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF505) HTH_45 PF14947.6 gi|407465186|ref|YP_006776068.1| - 0.0008 19.3 0.7 0.005 16.8 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_5 PF01022.20 gi|407465186|ref|YP_006776068.1| - 0.0036 17.1 0.6 0.011 15.6 0.0 2.2 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|407465186|ref|YP_006776068.1| - 0.0062 16.4 0.0 0.042 13.7 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.9 gi|407465186|ref|YP_006776068.1| - 0.0084 16.2 0.4 0.26 11.4 0.1 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_Crp_2 PF13545.6 gi|407465186|ref|YP_006776068.1| - 0.0089 16.0 0.1 0.035 14.1 0.0 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|407465186|ref|YP_006776068.1| - 0.054 13.4 0.0 2.6 8.0 0.0 2.6 3 0 0 3 3 3 0 MarR family zf-HIT PF04438.16 gi|407465187|ref|YP_006776069.1| - 0.11 12.4 9.3 0.12 12.3 4.1 2.2 2 0 0 2 2 2 0 HIT zinc finger zf-ribbon_3 PF13248.6 gi|407465187|ref|YP_006776069.1| - 0.13 11.7 6.3 6.3 6.4 0.0 2.6 2 1 0 2 2 2 0 zinc-ribbon domain DUF1258 PF06869.12 gi|407465187|ref|YP_006776069.1| - 0.18 11.3 1.7 0.18 11.2 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) PolC_DP2 PF03833.13 gi|407465187|ref|YP_006776069.1| - 0.23 9.3 4.9 0.23 9.3 4.9 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 RecR PF02132.15 gi|407465187|ref|YP_006776069.1| - 2.9 7.5 8.9 0.27 10.8 2.3 2.1 2 0 0 2 2 2 0 RecR protein zf-B_box PF00643.24 gi|407465187|ref|YP_006776069.1| - 3.5 7.9 11.4 0.32 11.2 3.7 2.6 2 1 1 3 3 3 0 B-box zinc finger C1_2 PF03107.16 gi|407465187|ref|YP_006776069.1| - 3.5 8.0 12.1 0.2 12.0 5.8 2.0 1 1 1 2 2 2 0 C1 domain Hemerythrin PF01814.23 gi|407465188|ref|YP_006776070.1| - 4.7e-11 43.4 0.2 4.7e-11 43.4 0.2 1.4 2 0 0 2 2 2 1 Hemerythrin HHE cation binding domain DUF1786 PF08735.10 gi|407465188|ref|YP_006776070.1| - 0.12 11.6 0.1 0.14 11.4 0.1 1.2 1 0 0 1 1 1 0 Putative pyruvate format-lyase activating enzyme (DUF1786) Fes1 PF08609.10 gi|407465189|ref|YP_006776071.1| - 0.019 15.8 0.3 0.021 15.7 0.3 1.1 1 0 0 1 1 1 0 Nucleotide exchange factor Fes1 dCache_1 PF02743.18 gi|407465190|ref|YP_006776072.1| - 5.8e-14 52.5 2.4 5.8e-14 52.5 2.4 1.9 2 0 0 2 2 2 1 Cache domain HAMP PF00672.25 gi|407465190|ref|YP_006776072.1| - 1.4e-13 51.0 0.3 2.7e-13 50.0 0.1 1.7 2 0 0 2 2 2 1 HAMP domain Guanylate_cyc PF00211.20 gi|407465190|ref|YP_006776072.1| - 3.1e-08 33.4 0.0 5.9e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain IFT57 PF10498.9 gi|407465190|ref|YP_006776072.1| - 0.0057 15.7 0.3 0.013 14.5 0.3 1.5 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF485 PF04341.12 gi|407465190|ref|YP_006776072.1| - 0.038 13.9 0.0 0.081 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF2015 PF09435.10 gi|407465190|ref|YP_006776072.1| - 0.086 12.7 0.2 0.41 10.5 0.0 2.2 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF2015) YxiJ PF14176.6 gi|407465190|ref|YP_006776072.1| - 0.15 12.5 1.1 1.6 9.2 0.1 2.6 2 0 0 2 2 2 0 YxiJ-like protein Cu-oxidase_3 PF07732.15 gi|407465191|ref|YP_006776073.1| - 1.2e-25 89.8 4.9 5.2e-24 84.6 0.2 3.1 3 0 0 3 3 3 2 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|407465191|ref|YP_006776073.1| - 4.1e-14 52.5 11.3 1.6e-06 27.9 5.3 3.5 3 1 0 3 3 3 2 Multicopper oxidase Cupredoxin_1 PF13473.6 gi|407465191|ref|YP_006776073.1| - 1.6e-11 44.2 0.1 2.7e-06 27.4 0.0 3.6 3 0 0 3 3 3 2 Cupredoxin-like domain Copper-bind PF00127.20 gi|407465191|ref|YP_006776073.1| - 5.4e-10 39.6 7.3 1.2e-06 28.9 0.3 4.1 3 2 0 3 3 3 2 Copper binding proteins, plastocyanin/azurin family SDH_C PF18317.1 gi|407465192|ref|YP_006776074.1| - 0.1 12.4 0.6 0.2 11.4 0.1 1.7 2 0 0 2 2 2 0 Shikimate 5'-dehydrogenase C-terminal domain CopG_antitoxin PF12441.8 gi|407465193|ref|YP_006776075.1| - 0.0044 17.5 0.8 0.063 13.8 0.0 2.8 2 1 1 3 3 3 1 CopG antitoxin of type II toxin-antitoxin system RE_BstXI PF09552.10 gi|407465193|ref|YP_006776075.1| - 0.013 14.8 0.0 0.02 14.1 0.0 1.4 1 1 0 1 1 1 0 BstXI restriction endonuclease Cu-oxidase_3 PF07732.15 gi|407465194|ref|YP_006776076.1| - 7.8e-26 90.4 1.3 5.5e-25 87.7 0.1 2.5 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|407465194|ref|YP_006776076.1| - 1.3e-18 67.1 3.5 3.5e-06 26.8 0.0 3.6 3 0 0 3 3 3 3 Multicopper oxidase Cupredoxin_1 PF13473.6 gi|407465194|ref|YP_006776076.1| - 1.8e-11 44.0 0.1 8.1e-06 25.9 0.0 3.5 3 0 0 3 3 3 2 Cupredoxin-like domain Copper-bind PF00127.20 gi|407465194|ref|YP_006776076.1| - 5.1e-06 26.9 5.9 0.00078 19.8 0.7 3.7 3 1 0 3 3 3 2 Copper binding proteins, plastocyanin/azurin family AAA_16 PF13191.6 gi|407465195|ref|YP_006776077.1| - 0.048 14.0 0.0 0.57 10.5 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain Lipase_GDSL PF00657.22 gi|407465195|ref|YP_006776077.1| - 0.078 12.9 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase DUF4393 PF14337.6 gi|407465195|ref|YP_006776077.1| - 0.43 10.4 5.8 5 6.9 0.1 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4393) Copper-bind PF00127.20 gi|407465196|ref|YP_006776078.1| - 0.1 13.0 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Copper binding proteins, plastocyanin/azurin family TetR_C_10 PF16295.5 gi|407465196|ref|YP_006776078.1| - 0.16 12.3 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CsgA PF17334.2 gi|407465197|ref|YP_006776079.1| - 0.012 16.4 0.6 0.017 15.8 0.6 1.2 1 0 0 1 1 1 0 Minor curli fiber component A Erf4 PF10256.9 gi|407465197|ref|YP_006776079.1| - 0.077 13.1 0.4 0.53 10.4 0.4 2.2 1 1 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family MCM6_C PF18263.1 gi|407465197|ref|YP_006776079.1| - 0.084 13.1 0.4 0.17 12.2 0.4 1.5 1 1 0 1 1 1 0 MCM6 C-terminal winged-helix domain Laminin_II PF06009.12 gi|407465198|ref|YP_006776080.1| - 0.084 12.9 2.0 0.76 9.8 0.2 2.6 2 0 0 2 2 2 0 Laminin Domain II DUF1993 PF09351.10 gi|407465198|ref|YP_006776080.1| - 0.099 12.8 0.2 3.6 7.7 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1993) zf-CHC2 PF01807.20 gi|407465198|ref|YP_006776080.1| - 0.51 10.2 3.0 11 5.9 0.1 3.0 2 1 0 2 2 2 0 CHC2 zinc finger DUF2989 PF11207.8 gi|407465198|ref|YP_006776080.1| - 2.9 7.6 10.6 0.7 9.6 0.5 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF2989) DUF2513 PF10711.9 gi|407465201|ref|YP_006776083.1| - 0.043 14.1 0.1 0.069 13.5 0.0 1.3 1 1 0 1 1 1 0 Hypothetical protein (DUF2513) 5_3_exonuc PF01367.20 gi|407465202|ref|YP_006776084.1| - 3 8.5 5.4 2.1 9.0 0.4 3.0 2 1 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Tetraspanin PF00335.20 gi|407465204|ref|YP_006776086.1| - 0.0044 16.8 0.2 0.0056 16.4 0.2 1.2 1 0 0 1 1 1 1 Tetraspanin family LMF1 PF06762.14 gi|407465204|ref|YP_006776086.1| - 0.03 13.4 2.2 0.032 13.4 2.2 1.0 1 0 0 1 1 1 0 Lipase maturation factor Deltameth_res PF16020.5 gi|407465204|ref|YP_006776086.1| - 0.036 13.9 1.9 0.06 13.2 0.2 2.1 2 0 0 2 2 2 0 Deltamethrin resistance Pox_A14 PF05767.12 gi|407465204|ref|YP_006776086.1| - 0.06 13.5 2.4 0.13 12.5 2.4 1.6 1 1 0 1 1 1 0 Poxvirus virion envelope protein A14 ATP_synt_H PF05493.13 gi|407465204|ref|YP_006776086.1| - 0.065 13.7 0.5 0.13 12.8 0.5 1.6 1 0 0 1 1 1 0 ATP synthase subunit H Serine_rich PF08824.10 gi|407465205|ref|YP_006776087.1| - 0.0035 17.4 0.2 0.0046 17.0 0.2 1.1 1 0 0 1 1 1 1 Serine rich protein interaction domain DUF5618 PF18498.1 gi|407465205|ref|YP_006776087.1| - 0.0062 16.7 0.2 0.0079 16.4 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5618) U3snoRNP10 PF12397.8 gi|407465205|ref|YP_006776087.1| - 0.026 14.9 0.0 0.032 14.6 0.0 1.2 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 10 Ribosomal_S9 PF00380.19 gi|407465205|ref|YP_006776087.1| - 0.057 13.9 0.3 0.085 13.4 0.3 1.2 1 0 0 1 1 1 0 Ribosomal protein S9/S16 Phage_integrase PF00589.22 gi|407465208|ref|YP_006776090.1| - 0.00084 19.2 0.0 0.0027 17.5 0.0 1.8 2 0 0 2 2 2 1 Phage integrase family DivIC PF04977.15 gi|407465208|ref|YP_006776090.1| - 0.0024 17.6 1.9 0.0058 16.4 1.9 1.6 1 0 0 1 1 1 1 Septum formation initiator MADF_DNA_bdg PF10545.9 gi|407465208|ref|YP_006776090.1| - 0.074 13.4 1.7 0.19 12.1 0.4 2.4 2 0 0 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like HicB-like_2 PF15970.5 gi|407465208|ref|YP_006776090.1| - 0.14 12.3 0.1 0.36 11.0 0.1 1.6 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system Fib_alpha PF08702.10 gi|407465208|ref|YP_006776090.1| - 1.6 8.9 12.3 4.8 7.4 0.2 2.8 3 0 0 3 3 3 0 Fibrinogen alpha/beta chain family DUF465 PF04325.13 gi|407465209|ref|YP_006776091.1| - 0.16 12.1 0.4 0.27 11.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF465) DUF1704 PF08014.11 gi|407465210|ref|YP_006776092.1| - 0.011 14.8 0.7 0.016 14.2 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1704) HemX PF04375.14 gi|407465210|ref|YP_006776092.1| - 0.029 13.7 0.3 0.043 13.1 0.3 1.3 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Cob_adeno_trans PF01923.18 gi|407465210|ref|YP_006776092.1| - 0.12 12.5 0.1 0.21 11.7 0.1 1.4 1 0 0 1 1 1 0 Cobalamin adenosyltransferase 60KD_IMP PF02096.20 gi|407465210|ref|YP_006776092.1| - 1 9.2 3.4 0.24 11.3 0.3 1.5 2 0 0 2 2 2 0 60Kd inner membrane protein Arcadin_1 PF18653.1 gi|407465213|ref|YP_006776095.1| - 2.5e-05 24.3 1.8 3.4e-05 23.9 1.8 1.2 1 0 0 1 1 1 1 Arcadin 1 Thioredox_DsbH PF03190.15 gi|407465214|ref|YP_006776096.1| - 4.3e-76 254.4 0.0 7.3e-76 253.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|407465214|ref|YP_006776096.1| - 1.3e-10 41.3 0.0 2.6e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like C5-epim_C PF06662.13 gi|407465214|ref|YP_006776096.1| - 4.7e-06 26.2 2.0 0.82 9.1 0.0 4.2 4 0 0 4 4 4 2 D-glucuronyl C5-epimerase C-terminus Glyco_hydro_88 PF07470.13 gi|407465214|ref|YP_006776096.1| - 1.9e-05 23.9 0.1 0.88 8.6 0.0 3.5 2 2 2 4 4 4 3 Glycosyl Hydrolase Family 88 GlcNAc_2-epim PF07221.11 gi|407465214|ref|YP_006776096.1| - 0.00042 19.7 0.0 2.1 7.5 0.0 3.2 3 0 0 3 3 3 2 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Thioredoxin_2 PF13098.6 gi|407465214|ref|YP_006776096.1| - 0.03 14.8 0.0 0.071 13.6 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin-like domain Glyco_hydro_127 PF07944.12 gi|407465214|ref|YP_006776096.1| - 0.041 12.4 0.1 0.25 9.8 0.0 2.3 2 1 0 2 2 2 0 Beta-L-arabinofuranosidase, GH127 Glyco_hydro_76 PF03663.14 gi|407465214|ref|YP_006776096.1| - 0.11 11.9 0.3 1.2 8.6 0.1 2.2 1 1 1 2 2 2 0 Glycosyl hydrolase family 76 FliT PF05400.13 gi|407465215|ref|YP_006776097.1| - 0.095 13.5 0.7 0.11 13.4 0.7 1.2 1 0 0 1 1 1 0 Flagellar protein FliT Lactococcin_972 PF09683.10 gi|407465215|ref|YP_006776097.1| - 0.1 13.2 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 Bacteriocin (Lactococcin_972) ADH_N PF08240.12 gi|407465216|ref|YP_006776098.1| - 2.1e-30 104.8 1.2 3.6e-30 104.1 1.2 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|407465216|ref|YP_006776098.1| - 8.4e-17 61.4 0.3 1.4e-16 60.7 0.3 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|407465216|ref|YP_006776098.1| - 5.8e-05 24.2 0.0 0.00013 23.1 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|407465216|ref|YP_006776098.1| - 6e-05 22.4 0.7 9e-05 21.9 0.7 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|407465216|ref|YP_006776098.1| - 0.00064 19.1 0.1 0.0013 18.2 0.1 1.6 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CoA_binding PF02629.19 gi|407465216|ref|YP_006776098.1| - 0.011 16.4 5.7 0.4 11.4 3.4 3.5 2 1 1 3 3 3 0 CoA binding domain DUF4443 PF14544.6 gi|407465216|ref|YP_006776098.1| - 0.017 15.4 0.1 0.042 14.1 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4443) DUF1460 PF07313.12 gi|407465216|ref|YP_006776098.1| - 0.13 11.6 0.0 1.5 8.2 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1460) DUF1978 PF09321.10 gi|407465217|ref|YP_006776099.1| - 0.018 14.3 0.7 0.019 14.3 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1978) MutS_II PF05188.17 gi|407465217|ref|YP_006776099.1| - 0.042 14.1 0.1 0.049 13.9 0.1 1.1 1 0 0 1 1 1 0 MutS domain II Jas PF16135.5 gi|407465218|ref|YP_006776100.1| - 0.038 14.2 1.3 0.37 11.0 0.2 2.3 2 0 0 2 2 2 0 TPL-binding domain in jasmonate signalling Lar_restr_allev PF14354.6 gi|407465218|ref|YP_006776100.1| - 0.084 13.3 2.9 0.38 11.1 2.9 2.1 1 1 0 1 1 1 0 Restriction alleviation protein Lar CbeA_antitoxin PF06154.11 gi|407465218|ref|YP_006776100.1| - 0.12 13.0 0.0 0.21 12.2 0.0 1.3 1 0 0 1 1 1 0 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A OrfB_Zn_ribbon PF07282.11 gi|407465218|ref|YP_006776100.1| - 0.19 11.7 2.3 0.39 10.7 2.3 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF1129 PF06570.11 gi|407465220|ref|YP_006776102.1| - 6.3 6.2 11.0 5.6 6.4 3.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1129) Form-deh_trans PF09163.11 gi|407465221|ref|YP_006776103.1| - 0.12 12.1 0.0 0.12 12.1 0.0 1.9 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane DUF2754 PF10953.8 gi|407465221|ref|YP_006776103.1| - 0.66 10.3 5.2 1.3 9.4 5.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2754) DUF2207 PF09972.9 gi|407465221|ref|YP_006776103.1| - 1.8 7.2 3.7 2.2 6.9 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) AsnC_trans_reg PF01037.21 gi|407465222|ref|YP_006776104.1| - 7.5e-10 38.6 0.0 7.9e-10 38.6 0.0 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain TruD PF01142.18 gi|407465223|ref|YP_006776105.1| - 5e-86 289.1 0.6 1.1e-85 287.9 0.6 1.5 1 1 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) SGL PF08450.12 gi|407465224|ref|YP_006776106.1| - 6.2e-05 22.7 3.8 0.29 10.7 0.0 4.2 4 1 1 5 5 5 3 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|407465224|ref|YP_006776106.1| - 0.00043 20.2 0.0 0.013 15.5 0.0 3.3 3 0 0 3 3 3 1 NHL repeat DUF5074 PF16819.5 gi|407465224|ref|YP_006776106.1| - 0.0012 18.8 1.2 0.21 11.6 0.0 3.2 4 0 0 4 4 4 2 Domain of unknown function (DUF5074) Reg_prop PF07494.11 gi|407465224|ref|YP_006776106.1| - 0.25 11.7 12.0 9.3 6.9 0.0 5.4 6 0 0 6 6 6 0 Two component regulator propeller PTH2 PF01981.16 gi|407465225|ref|YP_006776107.1| - 8.7e-40 135.7 0.0 9.6e-40 135.5 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Cupredoxin_1 PF13473.6 gi|407465226|ref|YP_006776108.1| - 3.6e-10 39.9 0.0 7.3e-10 38.9 0.0 1.5 1 1 0 1 1 1 1 Cupredoxin-like domain COX2 PF00116.20 gi|407465226|ref|YP_006776108.1| - 0.045 13.6 0.0 0.087 12.7 0.0 1.5 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain Wzz PF02706.15 gi|407465226|ref|YP_006776108.1| - 0.046 14.0 0.2 0.085 13.2 0.2 1.6 1 1 0 1 1 1 0 Chain length determinant protein DUF4064 PF13273.6 gi|407465226|ref|YP_006776108.1| - 0.41 10.9 0.1 0.41 10.9 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) Spectrin PF00435.21 gi|407465226|ref|YP_006776108.1| - 0.55 10.7 3.9 0.87 10.1 3.9 1.2 1 0 0 1 1 1 0 Spectrin repeat FAD_binding_3 PF01494.19 gi|407465227|ref|YP_006776109.1| - 2.2e-07 30.5 0.1 0.0076 15.5 0.0 2.6 2 1 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.12 gi|407465227|ref|YP_006776109.1| - 9.8e-05 21.6 0.0 0.027 13.5 0.0 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|407465227|ref|YP_006776109.1| - 0.00026 21.2 0.2 0.001 19.3 0.0 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|407465227|ref|YP_006776109.1| - 0.0018 18.0 0.1 0.14 11.7 0.1 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|407465227|ref|YP_006776109.1| - 0.019 14.2 1.2 0.065 12.5 0.5 2.0 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|407465227|ref|YP_006776109.1| - 0.03 13.0 1.9 0.091 11.4 0.0 2.3 3 0 0 3 3 3 0 HI0933-like protein Amino_oxidase PF01593.24 gi|407465227|ref|YP_006776109.1| - 0.054 12.8 0.0 0.085 12.1 0.0 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.24 gi|407465227|ref|YP_006776109.1| - 0.07 12.2 0.0 0.12 11.5 0.0 1.5 1 0 0 1 1 1 0 FAD binding domain FAD_oxidored PF12831.7 gi|407465227|ref|YP_006776109.1| - 0.088 12.1 0.2 0.85 8.9 0.0 2.2 2 1 0 2 2 2 0 FAD dependent oxidoreductase zf-CHY PF05495.12 gi|407465228|ref|YP_006776110.1| - 0.0065 16.9 15.1 0.0072 16.8 15.1 1.0 1 0 0 1 1 1 1 CHY zinc finger DUF1610 PF07754.11 gi|407465228|ref|YP_006776110.1| - 0.012 15.6 8.9 0.012 15.6 8.9 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) C1_2 PF03107.16 gi|407465228|ref|YP_006776110.1| - 0.039 14.3 4.7 0.039 14.3 4.7 2.3 1 1 1 2 2 2 0 C1 domain zf-HIT PF04438.16 gi|407465228|ref|YP_006776110.1| - 3.2 7.7 22.6 0.16 11.9 4.7 3.2 2 1 0 2 2 2 0 HIT zinc finger DUF3678 PF12435.8 gi|407465228|ref|YP_006776110.1| - 4.6 6.7 7.0 3.1 7.3 2.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) EF1_GNE PF00736.19 gi|407465229|ref|YP_006776111.1| - 3.3e-17 62.4 0.0 3.7e-17 62.3 0.0 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain AAA PF00004.29 gi|407465230|ref|YP_006776112.1| - 8.2e-88 291.6 0.0 4.7e-47 159.7 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|407465230|ref|YP_006776112.1| - 1e-29 102.0 1.7 1e-14 54.0 0.4 2.5 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|407465230|ref|YP_006776112.1| - 1.2e-25 89.5 0.5 5.4e-25 87.4 0.5 2.2 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.12 gi|407465230|ref|YP_006776112.1| - 1.8e-15 57.0 0.0 1.2e-08 34.9 0.0 3.6 4 0 0 4 4 4 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|407465230|ref|YP_006776112.1| - 1.4e-12 48.1 0.0 3.4e-07 30.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|407465230|ref|YP_006776112.1| - 5.1e-12 46.5 0.0 0.0054 17.1 0.0 4.4 2 2 1 3 3 3 2 AAA ATPase domain CDC48_2 PF02933.17 gi|407465230|ref|YP_006776112.1| - 2.6e-11 43.2 0.3 1e-10 41.2 0.3 2.0 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 AAA_14 PF13173.6 gi|407465230|ref|YP_006776112.1| - 1.2e-10 41.5 0.0 8.2e-06 25.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|407465230|ref|YP_006776112.1| - 6.7e-10 39.1 0.2 0.00017 21.6 0.0 4.0 3 2 0 3 3 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|407465230|ref|YP_006776112.1| - 8.7e-10 39.0 0.6 0.027 14.7 0.0 4.3 2 2 1 3 3 3 2 AAA domain ATPase_2 PF01637.18 gi|407465230|ref|YP_006776112.1| - 3.7e-09 36.9 0.0 0.0016 18.4 0.0 3.6 2 1 1 3 3 3 2 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 gi|407465230|ref|YP_006776112.1| - 2e-08 34.5 0.0 0.0026 18.1 0.0 2.8 2 0 0 2 2 2 2 RNA helicase AAA_33 PF13671.6 gi|407465230|ref|YP_006776112.1| - 2.6e-08 34.1 0.0 0.0054 16.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|407465230|ref|YP_006776112.1| - 9.6e-08 31.8 0.2 0.28 10.7 0.0 4.2 4 0 0 4 4 4 3 AAA domain ABC_tran PF00005.27 gi|407465230|ref|YP_006776112.1| - 8.1e-07 29.6 0.0 0.03 14.8 0.0 2.8 2 0 0 2 2 2 2 ABC transporter AAA_18 PF13238.6 gi|407465230|ref|YP_006776112.1| - 8.9e-07 29.5 0.0 0.058 13.9 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_28 PF13521.6 gi|407465230|ref|YP_006776112.1| - 3e-06 27.6 0.0 0.11 12.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|407465230|ref|YP_006776112.1| - 3.3e-06 27.0 0.0 0.055 13.2 0.0 2.8 3 0 0 3 3 2 2 IstB-like ATP binding protein ATPase PF06745.13 gi|407465230|ref|YP_006776112.1| - 4e-06 26.4 0.1 0.21 10.9 0.0 3.6 3 1 0 3 3 3 2 KaiC Rad17 PF03215.15 gi|407465230|ref|YP_006776112.1| - 5.2e-06 26.5 0.1 0.21 11.5 0.0 3.0 2 1 1 3 3 3 2 Rad17 P-loop domain AAA_24 PF13479.6 gi|407465230|ref|YP_006776112.1| - 1.2e-05 25.2 0.1 0.058 13.1 0.0 3.2 3 1 0 3 3 2 2 AAA domain Mg_chelatase PF01078.21 gi|407465230|ref|YP_006776112.1| - 1.7e-05 24.3 1.7 0.019 14.3 0.1 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI NACHT PF05729.12 gi|407465230|ref|YP_006776112.1| - 4.4e-05 23.5 0.3 1.1 9.2 0.0 3.6 3 0 0 3 3 3 1 NACHT domain TsaE PF02367.17 gi|407465230|ref|YP_006776112.1| - 0.00027 20.9 0.0 0.14 12.1 0.0 2.5 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activ_2 PF14532.6 gi|407465230|ref|YP_006776112.1| - 0.00034 20.7 0.0 0.44 10.7 0.0 3.3 2 1 1 3 3 3 1 Sigma-54 interaction domain TIP49 PF06068.13 gi|407465230|ref|YP_006776112.1| - 0.00037 19.8 0.0 0.7 9.0 0.0 2.5 2 0 0 2 2 2 2 TIP49 P-loop domain Viral_helicase1 PF01443.18 gi|407465230|ref|YP_006776112.1| - 0.00048 19.9 0.0 0.13 12.0 0.0 2.8 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase Vps4_C PF09336.10 gi|407465230|ref|YP_006776112.1| - 0.00057 19.8 0.4 1.2 9.2 0.1 2.9 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain Sigma54_activat PF00158.26 gi|407465230|ref|YP_006776112.1| - 0.0012 18.6 0.0 0.7 9.6 0.0 3.1 2 1 0 2 2 2 1 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|407465230|ref|YP_006776112.1| - 0.0017 17.7 0.1 1.6 8.0 0.1 2.6 2 0 0 2 2 2 2 Zeta toxin AAA_11 PF13086.6 gi|407465230|ref|YP_006776112.1| - 0.0017 18.2 0.1 0.83 9.4 0.1 2.8 2 1 0 2 2 2 1 AAA domain PhoH PF02562.16 gi|407465230|ref|YP_006776112.1| - 0.0018 17.8 0.4 1.5 8.3 0.0 3.2 3 0 0 3 3 3 1 PhoH-like protein AAA_7 PF12775.7 gi|407465230|ref|YP_006776112.1| - 0.0023 17.5 0.1 0.67 9.4 0.0 2.7 2 1 0 2 2 2 1 P-loop containing dynein motor region UFD1 PF03152.14 gi|407465230|ref|YP_006776112.1| - 0.0037 16.8 0.7 0.0068 15.9 0.2 1.7 2 0 0 2 2 1 1 Ubiquitin fusion degradation protein UFD1 DUF2075 PF09848.9 gi|407465230|ref|YP_006776112.1| - 0.009 15.3 0.0 2.7 7.1 0.0 2.6 2 1 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) DUF815 PF05673.13 gi|407465230|ref|YP_006776112.1| - 0.009 15.2 0.0 5.4 6.1 0.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF815) AAA_3 PF07726.11 gi|407465230|ref|YP_006776112.1| - 0.016 15.1 0.0 5.9 6.8 0.0 2.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Adeno_IVa2 PF02456.15 gi|407465230|ref|YP_006776112.1| - 0.018 13.8 0.0 3.9 6.2 0.0 2.3 2 0 0 2 2 2 0 Adenovirus IVa2 protein AAA_17 PF13207.6 gi|407465230|ref|YP_006776112.1| - 0.022 15.2 0.0 10 6.5 0.0 2.9 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|407465230|ref|YP_006776112.1| - 0.037 13.2 0.1 1.5 7.9 0.0 2.5 2 0 0 2 2 2 0 NB-ARC domain KAP_NTPase PF07693.14 gi|407465230|ref|YP_006776112.1| - 0.044 13.0 0.4 13 5.0 0.0 3.1 2 2 0 3 3 3 0 KAP family P-loop domain SRPRB PF09439.10 gi|407465230|ref|YP_006776112.1| - 0.045 13.2 0.0 19 4.7 0.0 3.1 3 0 0 3 3 3 0 Signal recognition particle receptor beta subunit SKI PF01202.22 gi|407465230|ref|YP_006776112.1| - 0.055 13.6 0.0 3.6 7.7 0.0 2.7 3 0 0 3 3 2 0 Shikimate kinase Parvo_NS1 PF01057.17 gi|407465230|ref|YP_006776112.1| - 0.097 11.7 0.1 4.4 6.3 0.0 2.2 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 AAA_19 PF13245.6 gi|407465230|ref|YP_006776112.1| - 0.42 10.9 1.7 20 5.5 0.0 2.8 3 0 0 3 3 2 0 AAA domain UbiA PF01040.18 gi|407465232|ref|YP_006776114.1| - 1.8e-49 168.3 20.6 2.4e-49 167.9 20.6 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family FA_desaturase PF00487.24 gi|407465232|ref|YP_006776114.1| - 0.23 11.2 0.0 0.23 11.2 0.0 3.3 1 1 3 4 4 4 0 Fatty acid desaturase Copper-bind PF00127.20 gi|407465233|ref|YP_006776115.1| - 3.8e-13 49.7 0.6 7.2e-07 29.6 0.0 2.9 2 2 0 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|407465233|ref|YP_006776115.1| - 7.5e-11 42.1 0.0 0.0003 20.9 0.0 2.4 1 1 1 2 2 2 2 Cupredoxin-like domain DUF2190 PF09956.9 gi|407465233|ref|YP_006776115.1| - 3.4 8.2 6.4 26 5.4 4.1 2.9 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2190) Prok-JAB PF14464.6 gi|407465234|ref|YP_006776116.1| - 7.6e-18 64.4 0.0 8.6e-18 64.2 0.0 1.0 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain Toxin-JAB1 PF15659.6 gi|407465234|ref|YP_006776116.1| - 2.1e-05 24.8 0.0 2.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 JAB-like toxin 1 JAB PF01398.21 gi|407465234|ref|YP_006776116.1| - 0.00023 21.1 0.0 0.0003 20.7 0.0 1.3 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease RadC PF04002.15 gi|407465234|ref|YP_006776116.1| - 0.13 12.2 0.0 0.16 11.9 0.0 1.3 1 1 0 1 1 1 0 RadC-like JAB domain BRCA2 PF00634.18 gi|407465234|ref|YP_006776116.1| - 0.16 11.6 0.8 0.39 10.4 0.8 1.7 1 0 0 1 1 1 0 BRCA2 repeat Cyclophil_like PF04126.13 gi|407465235|ref|YP_006776117.1| - 1.5e-37 128.0 0.0 1.8e-37 127.8 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin-like Cyclophil_like2 PF18050.1 gi|407465235|ref|YP_006776117.1| - 3.4e-07 30.2 0.0 4.6e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin-like family AAA_33 PF13671.6 gi|407465236|ref|YP_006776118.1| - 6.1e-10 39.4 0.2 1.2e-06 28.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain KTI12 PF08433.10 gi|407465236|ref|YP_006776118.1| - 0.001 18.6 0.9 0.022 14.2 0.2 2.0 1 1 1 2 2 2 2 Chromatin associated protein KTI12 AAA_14 PF13173.6 gi|407465236|ref|YP_006776118.1| - 0.029 14.4 0.1 0.038 14.0 0.1 1.2 1 0 0 1 1 1 0 AAA domain ATP_bind_2 PF03668.15 gi|407465236|ref|YP_006776118.1| - 0.056 12.7 0.2 0.088 12.1 0.1 1.4 1 1 0 1 1 1 0 P-loop ATPase protein family DUF2024 PF09630.10 gi|407465237|ref|YP_006776119.1| - 9.4e-37 124.8 1.3 1e-36 124.6 1.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2024) H_PPase PF03030.16 gi|407465239|ref|YP_006776121.1| - 1.7e-224 747.3 52.8 1.9e-224 747.1 52.8 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase SprT-like PF10263.9 gi|407465240|ref|YP_006776122.1| - 0.00041 20.2 0.0 0.00055 19.8 0.0 1.3 1 0 0 1 1 1 1 SprT-like family DUF45 PF01863.17 gi|407465240|ref|YP_006776122.1| - 0.0044 17.1 0.0 0.0057 16.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF45 Peptidase_M76 PF09768.9 gi|407465240|ref|YP_006776122.1| - 0.03 14.1 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 Peptidase M76 family DUF359 PF04019.12 gi|407465241|ref|YP_006776123.1| - 1.3e-36 125.0 0.1 1.9e-36 124.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Miff PF05644.11 gi|407465241|ref|YP_006776123.1| - 0.076 12.6 0.4 0.12 11.9 0.2 1.4 2 0 0 2 2 2 0 Mitochondrial and peroxisomal fission factor Mff ParA PF10609.9 gi|407465242|ref|YP_006776124.1| - 6e-101 337.0 0.1 7.7e-101 336.7 0.1 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase FeS_assembly_P PF01883.19 gi|407465242|ref|YP_006776124.1| - 2.1e-18 66.3 0.3 1.4e-17 63.7 0.1 2.4 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein CbiA PF01656.23 gi|407465242|ref|YP_006776124.1| - 1.5e-13 50.9 0.0 4.2e-13 49.5 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|407465242|ref|YP_006776124.1| - 6.4e-09 36.0 2.5 9.6e-08 32.1 0.6 2.3 1 1 0 2 2 2 1 AAA domain MipZ PF09140.11 gi|407465242|ref|YP_006776124.1| - 2.3e-07 30.4 0.0 3.8e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.18 gi|407465242|ref|YP_006776124.1| - 8.9e-07 28.6 0.1 0.0011 18.5 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_26 PF13500.6 gi|407465242|ref|YP_006776124.1| - 4e-06 26.8 0.6 0.036 13.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain ArsA_ATPase PF02374.15 gi|407465242|ref|YP_006776124.1| - 3.8e-05 23.0 1.1 3.8e-05 23.0 1.1 2.1 2 1 1 3 3 3 1 Anion-transporting ATPase VirC1 PF07015.11 gi|407465242|ref|YP_006776124.1| - 0.003 16.9 0.0 0.0062 15.9 0.0 1.5 1 0 0 1 1 1 1 VirC1 protein MeaB PF03308.16 gi|407465242|ref|YP_006776124.1| - 0.011 14.7 0.2 0.017 14.1 0.2 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CBP_BcsQ PF06564.12 gi|407465242|ref|YP_006776124.1| - 0.011 15.2 0.0 0.031 13.8 0.0 1.6 1 1 0 1 1 1 0 Cellulose biosynthesis protein BcsQ CLP1_P PF16575.5 gi|407465242|ref|YP_006776124.1| - 0.012 15.4 0.0 0.025 14.4 0.0 1.6 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop DUF1610 PF07754.11 gi|407465242|ref|YP_006776124.1| - 0.035 14.1 0.5 0.067 13.2 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1610) AAA_25 PF13481.6 gi|407465242|ref|YP_006776124.1| - 0.044 13.3 0.6 0.084 12.4 0.6 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|407465242|ref|YP_006776124.1| - 0.12 12.1 0.0 0.35 10.6 0.0 1.7 1 1 1 2 2 2 0 AAA domain APS_kinase PF01583.20 gi|407465242|ref|YP_006776124.1| - 0.15 11.9 0.1 0.33 10.8 0.1 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase SHS2_Rpb7-N PF03876.17 gi|407465243|ref|YP_006776125.1| - 3.5e-16 59.3 0.0 7.8e-16 58.2 0.0 1.6 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|407465243|ref|YP_006776125.1| - 4.4e-14 52.6 0.0 7.8e-14 51.8 0.0 1.4 1 0 0 1 1 1 1 S1 RNA binding domain S1_2 PF13509.6 gi|407465243|ref|YP_006776125.1| - 0.012 15.7 0.0 0.028 14.5 0.0 1.6 1 1 0 1 1 1 0 S1 domain BPL_C PF02237.17 gi|407465243|ref|YP_006776125.1| - 0.03 14.2 0.0 0.07 13.0 0.0 1.6 1 0 0 1 1 1 0 Biotin protein ligase C terminal domain Spt4 PF06093.13 gi|407465244|ref|YP_006776126.1| - 5.1e-14 52.1 0.4 6.3e-14 51.8 0.4 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger zf-ribbon_3 PF13248.6 gi|407465244|ref|YP_006776126.1| - 0.0015 17.9 1.5 0.058 12.8 0.3 2.2 2 0 0 2 2 2 1 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|407465244|ref|YP_006776126.1| - 0.0015 18.0 1.2 0.014 14.9 0.0 2.1 1 1 1 2 2 2 1 TFIIB zinc-binding TackOD1 PF18551.1 gi|407465244|ref|YP_006776126.1| - 0.0035 17.0 1.3 0.0044 16.7 1.3 1.1 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 HypA PF01155.19 gi|407465244|ref|YP_006776126.1| - 0.0091 16.0 0.5 0.01 15.8 0.5 1.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RecR PF02132.15 gi|407465244|ref|YP_006776126.1| - 0.021 14.4 1.8 0.027 14.0 1.8 1.2 1 0 0 1 1 1 0 RecR protein DUF35_N PF12172.8 gi|407465244|ref|YP_006776126.1| - 0.14 12.1 2.5 0.32 10.9 2.5 1.6 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) VP_N-CPKC PF11475.8 gi|407465244|ref|YP_006776126.1| - 0.21 11.5 1.4 0.3 11.0 1.4 1.2 1 0 0 1 1 1 0 Virion protein N terminal domain NRDD PF13597.6 gi|407465244|ref|YP_006776126.1| - 0.22 10.2 0.9 0.26 10.0 0.9 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase QRPTase_C PF01729.19 gi|407465245|ref|YP_006776127.1| - 5.8e-54 182.4 1.7 7.6e-54 182.0 1.7 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|407465245|ref|YP_006776127.1| - 3.5e-27 94.3 0.0 7.3e-27 93.3 0.0 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.19 gi|407465245|ref|YP_006776127.1| - 0.003 17.0 0.3 0.0067 15.8 0.1 1.6 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Ufm1 PF03671.14 gi|407465245|ref|YP_006776127.1| - 0.022 14.9 0.1 0.068 13.3 0.0 1.9 2 0 0 2 2 2 0 Ubiquitin fold modifier 1 protein TMP-TENI PF02581.17 gi|407465245|ref|YP_006776127.1| - 0.028 13.7 0.1 0.048 13.0 0.1 1.3 1 0 0 1 1 1 0 Thiamine monophosphate synthase Spectrin PF00435.21 gi|407465245|ref|YP_006776127.1| - 0.098 13.1 1.4 0.22 12.0 0.7 1.8 2 0 0 2 2 2 0 Spectrin repeat DNA_pol_B_3 PF08408.10 gi|407465245|ref|YP_006776127.1| - 0.35 11.1 2.6 0.79 9.9 0.5 2.3 1 1 1 2 2 2 0 DNA polymerase family B viral insert TPR_1 PF00515.28 gi|407465246|ref|YP_006776128.1| - 4.1e-14 51.7 4.9 4.9e-06 26.1 0.1 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407465246|ref|YP_006776128.1| - 9.9e-13 47.2 1.0 0.0013 18.7 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|407465246|ref|YP_006776128.1| - 5.7e-12 45.7 6.5 5.8e-07 29.7 0.6 2.1 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.6 gi|407465246|ref|YP_006776128.1| - 2.7e-08 33.4 9.2 0.00039 20.4 0.1 3.5 4 0 0 4 4 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407465246|ref|YP_006776128.1| - 3.2e-08 34.0 0.1 2.4e-06 28.0 0.2 2.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 gi|407465246|ref|YP_006776128.1| - 8e-07 29.0 1.9 0.07 13.5 0.1 3.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|407465246|ref|YP_006776128.1| - 1.2e-05 25.0 0.2 0.15 12.2 0.0 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|407465246|ref|YP_006776128.1| - 1.3e-05 25.1 1.3 0.0052 16.8 0.1 3.1 2 1 1 3 3 3 2 Fis1 C-terminal tetratricopeptide repeat TPR_16 PF13432.6 gi|407465246|ref|YP_006776128.1| - 2e-05 25.1 0.0 0.0022 18.6 0.0 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407465246|ref|YP_006776128.1| - 3.6e-05 24.0 0.2 0.032 14.5 0.0 2.8 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|407465246|ref|YP_006776128.1| - 8.5e-05 22.9 0.2 0.071 13.8 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407465246|ref|YP_006776128.1| - 0.00035 21.1 0.0 0.58 11.1 0.0 3.3 2 1 2 4 4 3 2 Tetratricopeptide repeat DUF4919 PF16266.5 gi|407465246|ref|YP_006776128.1| - 0.00083 19.4 2.9 0.014 15.3 1.3 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4919) TPR_3 PF07720.12 gi|407465246|ref|YP_006776128.1| - 0.0076 16.2 0.3 0.0076 16.2 0.3 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat Prefoldin PF02996.17 gi|407465246|ref|YP_006776128.1| - 0.042 13.7 2.0 0.06 13.3 0.6 1.8 1 1 1 2 2 2 0 Prefoldin subunit CDC37_M PF08565.11 gi|407465246|ref|YP_006776128.1| - 0.043 13.7 0.3 0.043 13.7 0.3 1.7 2 0 0 2 2 2 0 Cdc37 Hsp90 binding domain TPR_11 PF13414.6 gi|407465246|ref|YP_006776128.1| - 0.086 12.5 5.1 0.55 10.0 0.7 2.8 1 1 2 3 3 3 0 TPR repeat AIF_C PF14721.6 gi|407465246|ref|YP_006776128.1| - 0.18 12.2 1.5 0.18 12.2 0.6 1.5 2 0 0 2 2 2 0 Apoptosis-inducing factor, mitochondrion-associated, C-term NadA PF02445.16 gi|407465247|ref|YP_006776129.1| - 6.7e-114 380.1 3.0 7.7e-114 379.9 3.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein DUF108 PF01958.18 gi|407465248|ref|YP_006776130.1| - 4.6e-32 110.3 1.6 9.8e-32 109.2 0.5 2.1 2 0 0 2 2 2 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.16 gi|407465248|ref|YP_006776130.1| - 1.2e-15 58.2 0.1 1.9e-15 57.5 0.1 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|407465248|ref|YP_006776130.1| - 0.00015 21.9 0.0 0.00034 20.7 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 gi|407465248|ref|YP_006776130.1| - 0.0053 17.6 0.0 0.012 16.4 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold F420_oxidored PF03807.17 gi|407465248|ref|YP_006776130.1| - 0.0091 16.6 0.1 0.022 15.3 0.1 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|407465248|ref|YP_006776130.1| - 0.034 14.3 0.0 0.064 13.4 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|407465248|ref|YP_006776130.1| - 0.055 13.4 0.0 0.13 12.2 0.0 1.7 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|407465248|ref|YP_006776130.1| - 0.064 12.6 0.2 0.25 10.7 0.0 1.9 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 gi|407465248|ref|YP_006776130.1| - 0.12 12.3 0.0 0.26 11.3 0.0 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase zf-Sec23_Sec24 PF04810.15 gi|407465249|ref|YP_006776131.1| - 0.0085 16.1 0.7 0.27 11.3 0.1 2.6 3 0 0 3 3 3 1 Sec23/Sec24 zinc finger zf-RanBP PF00641.18 gi|407465249|ref|YP_006776131.1| - 0.0099 15.2 1.3 0.068 12.5 0.2 2.2 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others Vps36-NZF-N PF16988.5 gi|407465249|ref|YP_006776131.1| - 0.099 12.1 0.1 0.099 12.1 0.1 1.7 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain YkuI_C PF10388.9 gi|407465249|ref|YP_006776131.1| - 0.15 11.8 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 EAL-domain associated signalling protein domain PhnA_Zn_Ribbon PF08274.12 gi|407465249|ref|YP_006776131.1| - 0.22 11.5 3.4 1.2 9.1 1.5 2.5 2 1 0 2 2 2 0 PhnA Zinc-Ribbon zf-C2H2_12 PF18658.1 gi|407465249|ref|YP_006776131.1| - 0.71 9.5 3.5 5.4 6.7 0.0 2.6 2 1 1 3 3 3 0 Zinc-finger C2H2-type zinc_ribbon_10 PF10058.9 gi|407465249|ref|YP_006776131.1| - 4.4 7.1 7.3 32 4.4 6.1 2.4 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein TA0956 PF11513.8 gi|407465250|ref|YP_006776132.1| - 0.14 12.4 0.7 1.9 8.8 0.1 2.2 1 1 1 2 2 2 0 Thermoplasma acidophilum protein TA0956 NurA PF09376.10 gi|407465252|ref|YP_006776134.1| - 8.1e-19 68.3 0.1 1.7e-18 67.2 0.0 1.6 2 0 0 2 2 2 1 NurA domain DUF87 PF01935.17 gi|407465253|ref|YP_006776135.1| - 3.6e-36 125.4 3.8 3.6e-36 125.4 3.8 1.8 2 0 0 2 2 2 1 Helicase HerA, central domain HAS-barrel PF09378.10 gi|407465253|ref|YP_006776135.1| - 0.0098 16.0 0.2 0.03 14.5 0.2 1.9 1 1 0 1 1 1 1 HAS barrel domain TrwB_AAD_bind PF10412.9 gi|407465253|ref|YP_006776135.1| - 0.019 13.9 0.1 0.055 12.4 0.0 1.9 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain ABC_tran PF00005.27 gi|407465253|ref|YP_006776135.1| - 0.022 15.3 0.0 0.048 14.2 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 gi|407465253|ref|YP_006776135.1| - 0.045 14.1 0.0 0.14 12.5 0.0 1.9 1 1 0 1 1 1 0 AAA ATPase domain PHP PF02811.19 gi|407465253|ref|YP_006776135.1| - 0.075 13.3 0.0 0.27 11.5 0.0 2.0 1 1 0 1 1 1 0 PHP domain Metallophos_2 PF12850.7 gi|407465254|ref|YP_006776136.1| - 3.3e-09 37.2 0.1 6.2e-09 36.3 0.1 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|407465254|ref|YP_006776136.1| - 1.5e-08 35.4 1.3 2.9e-08 34.4 1.3 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Osmo_CC PF08946.10 gi|407465254|ref|YP_006776136.1| - 0.27 11.5 1.3 13 6.1 0.1 3.3 3 0 0 3 3 3 0 Osmosensory transporter coiled coil TetR_C_10 PF16295.5 gi|407465255|ref|YP_006776137.1| - 0.013 15.8 0.0 0.019 15.3 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Condensation PF00668.20 gi|407465256|ref|YP_006776138.1| - 0.055 12.1 0.0 0.075 11.7 0.0 1.0 1 0 0 1 1 1 0 Condensation domain DUF2606 PF10794.9 gi|407465257|ref|YP_006776139.1| - 0.04 13.7 0.0 0.06 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) RHS PF03527.14 gi|407465257|ref|YP_006776139.1| - 0.09 12.5 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 RHS protein Copper-bind PF00127.20 gi|407465258|ref|YP_006776140.1| - 7.1e-17 61.7 0.9 4.4e-08 33.5 0.1 2.5 2 0 0 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|407465258|ref|YP_006776140.1| - 7.7e-11 42.0 0.0 9e-05 22.5 0.0 2.8 2 1 0 2 2 2 2 Cupredoxin-like domain Kazal_1 PF00050.21 gi|407465258|ref|YP_006776140.1| - 2.1e-08 34.0 0.2 2.1e-08 34.0 0.2 2.1 2 0 0 2 2 2 1 Kazal-type serine protease inhibitor domain Kazal_2 PF07648.15 gi|407465258|ref|YP_006776140.1| - 6.2e-07 29.5 0.2 1.4e-06 28.4 0.2 1.6 1 0 0 1 1 1 1 Kazal-type serine protease inhibitor domain PT PF04886.12 gi|407465258|ref|YP_006776140.1| - 0.26 10.9 8.9 0.61 9.7 8.9 1.5 1 0 0 1 1 1 0 PT repeat Trypan_PARP PF05887.11 gi|407465258|ref|YP_006776140.1| - 0.37 10.8 5.4 0.95 9.4 5.4 1.6 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) HEAT_2 PF13646.6 gi|407465259|ref|YP_006776141.1| - 2.4e-36 124.0 0.0 2.7e-17 62.9 0.1 2.1 1 1 2 3 3 3 3 HEAT repeats HEAT PF02985.22 gi|407465259|ref|YP_006776141.1| - 8e-16 56.8 0.0 0.0015 18.6 0.0 4.2 4 0 0 4 4 4 3 HEAT repeat HEAT_PBS PF03130.16 gi|407465259|ref|YP_006776141.1| - 3e-13 49.1 0.0 0.00013 22.3 0.1 3.6 4 0 0 4 4 4 2 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 gi|407465259|ref|YP_006776141.1| - 2.8e-10 40.5 0.0 0.15 12.6 0.0 4.0 4 0 0 4 4 4 3 HEAT-like repeat Cnd1 PF12717.7 gi|407465259|ref|YP_006776141.1| - 8.6e-07 29.1 0.1 0.0003 20.8 0.0 2.6 1 1 1 2 2 2 2 non-SMC mitotic condensation complex subunit 1 DUF2019 PF09450.10 gi|407465259|ref|YP_006776141.1| - 0.0017 18.3 0.1 0.23 11.4 0.1 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF2019) Adaptin_N PF01602.20 gi|407465259|ref|YP_006776141.1| - 0.0024 16.5 0.0 0.0051 15.4 0.0 1.5 1 1 0 1 1 1 1 Adaptin N terminal region Arm PF00514.23 gi|407465259|ref|YP_006776141.1| - 0.0056 16.7 0.0 2.9 8.1 0.0 3.5 4 0 0 4 4 4 1 Armadillo/beta-catenin-like repeat Redoxin PF08534.10 gi|407465260|ref|YP_006776142.1| - 2e-07 30.8 0.0 0.00011 22.0 0.0 2.1 2 0 0 2 2 2 2 Redoxin AhpC-TSA PF00578.21 gi|407465260|ref|YP_006776142.1| - 1.3e-06 28.4 0.1 2.1e-05 24.4 0.1 2.4 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 gi|407465260|ref|YP_006776142.1| - 0.0098 16.2 0.2 6.9 7.1 0.0 2.5 2 1 0 2 2 2 2 Thioredoxin-like AbiJ_NTD5 PF18865.1 gi|407465260|ref|YP_006776142.1| - 0.018 14.8 0.0 0.13 12.1 0.0 2.1 2 0 0 2 2 2 0 AbiJ N-terminal domain 5 GSHPx PF00255.19 gi|407465260|ref|YP_006776142.1| - 0.049 13.2 0.0 0.099 12.2 0.0 1.6 1 0 0 1 1 1 0 Glutathione peroxidase Thioredoxin_4 PF13462.6 gi|407465260|ref|YP_006776142.1| - 0.084 13.0 0.2 0.38 10.9 0.2 2.1 1 1 0 1 1 1 0 Thioredoxin Thioredoxin_2 PF13098.6 gi|407465260|ref|YP_006776142.1| - 0.11 12.9 0.7 0.7 10.4 0.0 2.3 2 1 0 2 2 2 0 Thioredoxin-like domain Ribosomal_L15e PF00827.17 gi|407465262|ref|YP_006776144.1| - 1.5e-44 152.0 4.4 1.9e-44 151.7 4.4 1.0 1 0 0 1 1 1 1 Ribosomal L15 DUF1179 PF06678.11 gi|407465266|ref|YP_006776148.1| - 2.7 8.0 7.1 7.1 6.7 7.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1179) 2-Hacid_dh_C PF02826.19 gi|407465267|ref|YP_006776149.1| - 2.5e-61 206.1 0.0 3.8e-61 205.6 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|407465267|ref|YP_006776149.1| - 9.9e-29 99.7 0.2 1.2e-28 99.5 0.2 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|407465267|ref|YP_006776149.1| - 0.0015 18.7 0.5 0.0073 16.5 0.0 2.0 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase LXG PF04740.12 gi|407465267|ref|YP_006776149.1| - 0.0038 17.0 0.0 0.0061 16.3 0.0 1.4 1 0 0 1 1 1 1 LXG domain of WXG superfamily Cu-oxidase_3 PF07732.15 gi|407465268|ref|YP_006776150.1| - 1.1e-08 35.1 0.9 1e-07 32.0 0.1 2.4 2 0 0 2 2 2 1 Multicopper oxidase Lyase_1 PF00206.20 gi|407465269|ref|YP_006776151.1| - 2.1e-87 293.4 0.7 3e-87 292.9 0.7 1.2 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 gi|407465269|ref|YP_006776151.1| - 6.1e-14 52.2 0.0 1.3e-13 51.1 0.0 1.6 1 0 0 1 1 1 1 Fumarase C C-terminus Radical_SAM PF04055.21 gi|407465270|ref|YP_006776152.1| - 1.3e-17 64.7 0.1 2e-17 64.1 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily UPF0004 PF00919.20 gi|407465270|ref|YP_006776152.1| - 1.5e-16 60.2 0.8 2.5e-16 59.5 0.0 1.8 2 0 0 2 2 2 1 Uncharacterized protein family UPF0004 zf-PARP PF00645.18 gi|407465270|ref|YP_006776152.1| - 0.044 14.6 0.3 0.13 13.1 0.3 1.8 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region Tubulin PF00091.25 gi|407465271|ref|YP_006776153.1| - 6.3e-16 59.2 3.9 3.5e-15 56.7 0.1 2.5 2 1 0 3 3 3 2 Tubulin/FtsZ family, GTPase domain Tubulin_2 PF13809.6 gi|407465271|ref|YP_006776153.1| - 0.023 13.9 0.1 0.44 9.7 0.0 2.2 1 1 1 2 2 2 0 Tubulin like Ribosomal_L31e PF01198.19 gi|407465272|ref|YP_006776154.1| - 3.7e-17 62.3 2.0 4.2e-17 62.2 1.0 1.5 2 0 0 2 2 2 1 Ribosomal protein L31e CBM_4_9 PF02018.17 gi|407465272|ref|YP_006776154.1| - 0.061 13.6 0.1 0.067 13.5 0.1 1.3 1 1 0 1 1 1 0 Carbohydrate binding domain FeoB_N PF02421.18 gi|407465272|ref|YP_006776154.1| - 0.091 12.3 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B Ribosomal_L39 PF00832.20 gi|407465273|ref|YP_006776155.1| - 9.8e-18 63.5 6.7 1.1e-17 63.3 6.7 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Ter PF05472.11 gi|407465273|ref|YP_006776155.1| - 0.04 13.0 1.2 0.043 12.9 1.2 1.0 1 0 0 1 1 1 0 DNA replication terminus site-binding protein (Ter protein) NUDIX PF00293.28 gi|407465274|ref|YP_006776156.1| - 1.6e-10 41.1 0.0 1.9e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain MTHFR PF02219.17 gi|407465275|ref|YP_006776157.1| - 0.021 14.2 0.0 0.04 13.3 0.0 1.5 1 1 0 1 1 1 0 Methylenetetrahydrofolate reductase Pterin_bind PF00809.22 gi|407465276|ref|YP_006776158.1| - 4.1e-31 108.5 0.0 6e-31 108.0 0.0 1.2 1 0 0 1 1 1 1 Pterin binding enzyme Met_synt_B12 PF02965.17 gi|407465276|ref|YP_006776158.1| - 1.1e-24 87.4 0.0 3.6e-24 85.7 0.0 1.8 1 1 0 1 1 1 1 Vitamin B12 dependent methionine synthase, activation domain B12-binding_2 PF02607.17 gi|407465276|ref|YP_006776158.1| - 1.4e-18 67.1 0.1 3.2e-18 65.9 0.1 1.6 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.19 gi|407465276|ref|YP_006776158.1| - 6.9e-18 64.8 0.0 1.5e-17 63.7 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain CdhD PF03599.16 gi|407465276|ref|YP_006776158.1| - 0.0011 17.8 0.0 0.0021 16.9 0.0 1.4 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit adh_short PF00106.25 gi|407465276|ref|YP_006776158.1| - 0.01 15.3 0.1 0.029 13.8 0.0 1.8 2 0 0 2 2 2 0 short chain dehydrogenase S-methyl_trans PF02574.16 gi|407465277|ref|YP_006776159.1| - 5.2e-64 216.6 0.0 5.9e-64 216.4 0.0 1.0 1 0 0 1 1 1 1 Homocysteine S-methyltransferase MFS_1 PF07690.16 gi|407465278|ref|YP_006776160.1| - 3.6e-27 95.2 68.5 4.8e-24 84.9 31.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|407465278|ref|YP_006776160.1| - 0.0009 18.2 32.1 0.0056 15.6 30.7 2.3 1 1 1 2 2 2 1 MFS_1 like family Cu-oxidase_3 PF07732.15 gi|407465279|ref|YP_006776161.1| - 3.5e-09 36.7 14.3 1.8e-06 28.0 1.7 4.0 3 1 0 3 3 3 2 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|407465279|ref|YP_006776161.1| - 8e-09 35.3 6.6 2.1e-08 34.0 1.6 3.9 4 0 0 4 4 4 1 Multicopper oxidase Copper-bind PF00127.20 gi|407465279|ref|YP_006776161.1| - 0.0066 16.9 2.4 3.3 8.2 0.2 3.5 4 0 0 4 4 4 2 Copper binding proteins, plastocyanin/azurin family BPD_transp_1 PF00528.22 gi|407465280|ref|YP_006776162.1| - 1.2e-21 77.3 15.7 2.3e-21 76.4 15.7 1.4 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|407465281|ref|YP_006776163.1| - 1.6e-31 109.6 0.0 3.1e-31 108.7 0.0 1.4 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.6 gi|407465281|ref|YP_006776163.1| - 6.1e-10 39.4 0.0 0.00056 19.8 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 gi|407465281|ref|YP_006776163.1| - 0.00048 20.6 0.3 0.0053 17.2 0.3 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|407465281|ref|YP_006776163.1| - 0.001 18.9 0.0 0.13 12.0 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|407465281|ref|YP_006776163.1| - 0.0057 16.6 0.0 0.0094 15.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase ATPase_2 PF01637.18 gi|407465281|ref|YP_006776163.1| - 0.012 15.6 0.0 0.025 14.5 0.0 1.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea Rad17 PF03215.15 gi|407465281|ref|YP_006776163.1| - 0.014 15.4 0.1 0.028 14.4 0.1 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|407465281|ref|YP_006776163.1| - 0.016 15.0 0.0 0.032 14.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 gi|407465281|ref|YP_006776163.1| - 0.019 14.4 0.4 2.6 7.4 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|407465281|ref|YP_006776163.1| - 0.028 14.1 0.0 0.63 9.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|407465281|ref|YP_006776163.1| - 0.03 14.6 0.1 0.088 13.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|407465281|ref|YP_006776163.1| - 0.033 14.2 0.0 0.066 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|407465281|ref|YP_006776163.1| - 0.035 14.5 0.0 0.058 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain VASP_tetra PF08776.11 gi|407465281|ref|YP_006776163.1| - 0.042 13.4 0.6 0.081 12.5 0.6 1.5 1 0 0 1 1 1 0 VASP tetramerisation domain NACHT PF05729.12 gi|407465281|ref|YP_006776163.1| - 0.043 13.7 0.0 0.083 12.8 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_18 PF13238.6 gi|407465281|ref|YP_006776163.1| - 0.052 14.1 0.0 0.089 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|407465281|ref|YP_006776163.1| - 0.055 13.6 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|407465281|ref|YP_006776163.1| - 0.064 12.8 0.1 0.17 11.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|407465281|ref|YP_006776163.1| - 0.066 13.5 0.0 0.12 12.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|407465281|ref|YP_006776163.1| - 0.082 13.3 0.0 0.21 12.0 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_23 PF13476.6 gi|407465281|ref|YP_006776163.1| - 0.088 13.3 0.0 0.17 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|407465281|ref|YP_006776163.1| - 0.14 11.9 0.2 0.47 10.2 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein TsaE PF02367.17 gi|407465281|ref|YP_006776163.1| - 0.17 11.9 0.0 0.31 11.1 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Arginosuc_synth PF00764.19 gi|407465282|ref|YP_006776164.1| - 9.5e-159 528.8 0.1 1.1e-158 528.6 0.1 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.21 gi|407465282|ref|YP_006776164.1| - 5.5e-05 23.0 0.0 8.5e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 gi|407465282|ref|YP_006776164.1| - 0.00074 19.1 0.0 0.0013 18.3 0.0 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC zinc_ribbon_4 PF13717.6 gi|407465283|ref|YP_006776165.1| - 9.2e-06 25.5 0.4 0.04 13.9 0.0 2.1 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|407465283|ref|YP_006776165.1| - 8.2e-05 22.3 0.4 0.044 13.5 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zf-TFIIB PF13453.6 gi|407465283|ref|YP_006776165.1| - 0.00031 20.0 0.6 0.11 11.8 0.1 2.1 2 0 0 2 2 2 2 Transcription factor zinc-finger zf-ribbon_3 PF13248.6 gi|407465283|ref|YP_006776165.1| - 0.00041 19.6 1.5 0.39 10.2 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|407465283|ref|YP_006776165.1| - 0.00095 19.0 0.4 0.0014 18.4 0.4 1.2 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit TF_Zn_Ribbon PF08271.12 gi|407465283|ref|YP_006776165.1| - 0.00099 18.6 2.2 0.0012 18.3 2.2 1.4 1 1 0 1 1 1 1 TFIIB zinc-binding UPF0547 PF10571.9 gi|407465283|ref|YP_006776165.1| - 0.0011 19.0 2.8 0.19 11.9 0.3 2.2 2 0 0 2 2 2 2 Uncharacterised protein family UPF0547 zf-RING_7 PF02591.15 gi|407465283|ref|YP_006776165.1| - 0.0054 16.9 1.8 0.15 12.2 0.1 2.3 2 0 0 2 2 2 1 C4-type zinc ribbon domain YacG PF03884.14 gi|407465283|ref|YP_006776165.1| - 0.0056 16.4 0.6 0.8 9.5 0.0 2.2 2 0 0 2 2 2 1 DNA gyrase inhibitor YacG HypA PF01155.19 gi|407465283|ref|YP_006776165.1| - 0.0059 16.6 0.3 0.0065 16.5 0.3 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ogr_Delta PF04606.12 gi|407465283|ref|YP_006776165.1| - 0.0079 16.2 0.3 1.1 9.3 0.0 2.1 2 0 0 2 2 2 1 Ogr/Delta-like zinc finger zf_UBZ PF18439.1 gi|407465283|ref|YP_006776165.1| - 0.0091 15.6 1.6 1.1 8.9 0.2 2.3 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger zf-C4_Topoisom PF01396.19 gi|407465283|ref|YP_006776165.1| - 0.0094 15.7 1.3 2 8.3 0.1 2.2 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger Lar_restr_allev PF14354.6 gi|407465283|ref|YP_006776165.1| - 0.012 16.0 0.4 0.015 15.7 0.4 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar DNA_RNApol_7kD PF03604.13 gi|407465283|ref|YP_006776165.1| - 0.013 15.1 2.8 0.64 9.8 0.2 2.7 1 1 2 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit A2L_zn_ribbon PF08792.10 gi|407465283|ref|YP_006776165.1| - 0.015 15.0 1.6 2 8.2 0.1 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|407465283|ref|YP_006776165.1| - 0.018 15.0 0.5 0.059 13.4 0.5 1.8 1 1 0 1 1 1 0 zinc-ribbons Zn_Tnp_IS1 PF03811.13 gi|407465283|ref|YP_006776165.1| - 0.018 14.7 0.5 1.9 8.3 0.1 2.2 2 0 0 2 2 2 0 InsA N-terminal domain zf-HYPF PF07503.12 gi|407465283|ref|YP_006776165.1| - 0.021 14.6 1.6 0.35 10.7 0.0 2.1 2 0 0 2 2 2 0 HypF finger DZR PF12773.7 gi|407465283|ref|YP_006776165.1| - 0.022 14.8 0.3 0.032 14.3 0.3 1.3 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_9 PF14369.6 gi|407465283|ref|YP_006776165.1| - 0.025 14.8 3.5 0.07 13.4 3.5 1.7 1 1 0 1 1 1 0 zinc-ribbon CpXC PF14353.6 gi|407465283|ref|YP_006776165.1| - 0.032 14.3 0.4 1.8 8.6 0.0 2.1 2 0 0 2 2 2 0 CpXC protein Zn-ribbon_8 PF09723.10 gi|407465283|ref|YP_006776165.1| - 0.032 14.3 3.4 0.72 10.0 0.2 2.0 1 1 0 2 2 2 0 Zinc ribbon domain Cys_rich_CPXG PF14255.6 gi|407465283|ref|YP_006776165.1| - 0.038 13.9 0.4 4.5 7.3 0.0 2.2 2 0 0 2 2 2 0 Cysteine-rich CPXCG DNA_ligase_ZBD PF03119.16 gi|407465283|ref|YP_006776165.1| - 0.039 14.0 3.1 4.9 7.3 0.1 2.6 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Prok-RING_1 PF14446.6 gi|407465283|ref|YP_006776165.1| - 0.047 13.6 5.5 0.1 12.5 5.5 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 IBR PF01485.21 gi|407465283|ref|YP_006776165.1| - 0.066 13.5 0.3 0.081 13.2 0.3 1.2 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Anti-TRAP PF15777.5 gi|407465283|ref|YP_006776165.1| - 0.1 12.6 1.7 0.21 11.6 1.7 1.6 1 1 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-ACC PF17848.1 gi|407465283|ref|YP_006776165.1| - 0.12 12.5 3.0 4.7 7.4 0.2 2.3 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain DUF1451 PF07295.11 gi|407465283|ref|YP_006776165.1| - 0.13 12.3 0.3 0.2 11.7 0.3 1.3 1 0 0 1 1 1 0 Zinc-ribbon containing domain zf-C2H2_4 PF13894.6 gi|407465283|ref|YP_006776165.1| - 0.15 12.9 0.4 7 7.8 0.1 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger PhnA_Zn_Ribbon PF08274.12 gi|407465283|ref|YP_006776165.1| - 0.16 12.0 3.8 3.5 7.7 0.1 2.2 1 1 1 2 2 2 0 PhnA Zinc-Ribbon zf-IS66 PF13005.7 gi|407465283|ref|YP_006776165.1| - 0.2 12.1 2.7 4.3 7.8 0.3 2.3 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 PADR1 PF08063.12 gi|407465283|ref|YP_006776165.1| - 0.52 10.1 3.0 2 8.3 0.1 2.1 1 1 1 2 2 2 0 PADR1 (NUC008) domain DUF983 PF06170.12 gi|407465283|ref|YP_006776165.1| - 1.4 9.4 2.6 5.8 7.4 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF983) Rubredoxin PF00301.20 gi|407465283|ref|YP_006776165.1| - 1.9 8.6 5.9 6.9 6.8 0.5 2.4 1 1 1 2 2 2 0 Rubredoxin RimK PF08443.11 gi|407465284|ref|YP_006776166.1| - 7.6e-32 110.4 0.0 9.8e-32 110.1 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_ST PF14397.6 gi|407465284|ref|YP_006776166.1| - 3.4e-10 39.6 0.1 3e-05 23.4 0.0 2.7 3 0 0 3 3 3 2 Sugar-transfer associated ATP-grasp GSH-S_ATP PF02955.16 gi|407465284|ref|YP_006776166.1| - 1.8e-08 34.0 0.0 2.4e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp PF02222.22 gi|407465284|ref|YP_006776166.1| - 3.1e-07 30.1 0.0 3.9e-06 26.6 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|407465284|ref|YP_006776166.1| - 7e-07 29.4 0.1 2.5e-06 27.6 0.1 1.8 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|407465284|ref|YP_006776166.1| - 2.7e-06 26.8 0.0 0.039 13.2 0.0 2.2 2 0 0 2 2 2 2 YheC/D like ATP-grasp GARS_A PF01071.19 gi|407465284|ref|YP_006776166.1| - 9.9e-05 22.2 0.0 0.00017 21.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPSase_L_D2 PF02786.17 gi|407465284|ref|YP_006776166.1| - 0.0011 18.5 0.0 0.0041 16.6 0.0 1.8 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 gi|407465284|ref|YP_006776166.1| - 0.0026 17.3 0.0 0.17 11.4 0.0 2.2 2 0 0 2 2 2 1 D-ala D-ala ligase C-terminus ATP-grasp_5 PF13549.6 gi|407465284|ref|YP_006776166.1| - 0.018 14.5 0.0 0.046 13.2 0.0 1.7 1 1 0 1 1 1 0 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|407465284|ref|YP_006776166.1| - 0.03 13.9 0.0 0.069 12.7 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain Semialdhyde_dh PF01118.24 gi|407465285|ref|YP_006776167.1| - 8e-36 123.1 0.0 1.3e-35 122.4 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|407465285|ref|YP_006776167.1| - 5.3e-18 65.7 0.0 8.5e-18 65.1 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Sacchrp_dh_NADP PF03435.18 gi|407465285|ref|YP_006776167.1| - 3.6e-05 24.0 0.0 7.1e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain GFO_IDH_MocA PF01408.22 gi|407465285|ref|YP_006776167.1| - 0.00027 21.7 0.0 0.00049 20.9 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.20 gi|407465285|ref|YP_006776167.1| - 0.00043 20.4 0.0 0.00092 19.3 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus AA_kinase PF00696.28 gi|407465286|ref|YP_006776168.1| - 1.9e-39 135.7 2.4 2.1e-39 135.6 2.4 1.0 1 0 0 1 1 1 1 Amino acid kinase family MAF_flag10 PF01973.18 gi|407465286|ref|YP_006776168.1| - 0.016 14.9 0.0 0.037 13.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF115 DUF4947 PF16305.5 gi|407465286|ref|YP_006776168.1| - 0.063 13.3 0.0 0.099 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4947) Ribosomal_L21p PF00829.21 gi|407465286|ref|YP_006776168.1| - 0.072 13.4 1.5 1.5 9.1 0.6 2.4 2 1 0 2 2 2 0 Ribosomal prokaryotic L21 protein Aminotran_3 PF00202.21 gi|407465287|ref|YP_006776169.1| - 7.9e-116 387.0 0.1 9.1e-116 386.8 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|407465287|ref|YP_006776169.1| - 0.0015 17.8 0.0 0.0044 16.3 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II DUF2931 PF11153.8 gi|407465287|ref|YP_006776169.1| - 0.097 12.4 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) HTH_AsnC-type PF13404.6 gi|407465288|ref|YP_006776170.1| - 1.5e-12 47.1 0.0 3e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|407465288|ref|YP_006776170.1| - 1.6e-11 43.6 0.1 2.6e-11 42.9 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|407465288|ref|YP_006776170.1| - 2.3e-11 43.5 0.2 3.3e-11 43.0 0.2 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain MarR_2 PF12802.7 gi|407465288|ref|YP_006776170.1| - 0.0058 16.5 0.0 0.0095 15.8 0.0 1.3 1 0 0 1 1 1 1 MarR family NapD PF03927.13 gi|407465288|ref|YP_006776170.1| - 0.0076 16.3 0.7 0.014 15.4 0.7 1.5 1 0 0 1 1 1 1 NapD protein HTH_11 PF08279.12 gi|407465288|ref|YP_006776170.1| - 0.0076 16.2 0.1 0.018 15.0 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|407465288|ref|YP_006776170.1| - 0.0092 15.8 0.0 0.043 13.7 0.0 2.0 2 1 0 2 2 2 1 Bacterial regulatory protein, arsR family Sigma70_r4 PF04545.16 gi|407465288|ref|YP_006776170.1| - 0.013 15.0 0.0 0.031 13.8 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 Mga PF05043.13 gi|407465288|ref|YP_006776170.1| - 0.019 15.6 0.0 0.031 14.9 0.0 1.4 1 0 0 1 1 1 0 Mga helix-turn-helix domain ACT_4 PF13291.6 gi|407465288|ref|YP_006776170.1| - 0.021 15.4 0.2 4.8 7.8 0.1 2.3 2 0 0 2 2 2 0 ACT domain TrmB PF01978.19 gi|407465288|ref|YP_006776170.1| - 0.036 14.0 0.3 0.82 9.6 0.1 2.2 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|407465288|ref|YP_006776170.1| - 0.041 13.8 0.3 0.1 12.5 0.1 1.8 2 0 0 2 2 2 0 MarR family HTH_9 PF08221.11 gi|407465288|ref|YP_006776170.1| - 0.062 13.4 0.0 0.15 12.2 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DDRGK PF09756.9 gi|407465288|ref|YP_006776170.1| - 0.071 12.7 1.1 0.17 11.5 0.1 1.8 2 0 0 2 2 2 0 DDRGK domain HTH_IclR PF09339.10 gi|407465288|ref|YP_006776170.1| - 0.071 12.9 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF2774 PF11242.8 gi|407465288|ref|YP_006776170.1| - 0.083 13.1 0.0 0.45 10.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2774) HTH_DeoR PF08220.12 gi|407465288|ref|YP_006776170.1| - 0.085 12.6 0.1 0.2 11.4 0.0 1.7 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|407465288|ref|YP_006776170.1| - 0.1 12.0 0.0 0.21 11.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 SCO1-SenC PF02630.14 gi|407465288|ref|YP_006776170.1| - 0.12 12.3 0.1 0.15 11.9 0.1 1.2 1 0 0 1 1 1 0 SCO1/SenC FeoC PF09012.10 gi|407465288|ref|YP_006776170.1| - 0.13 12.4 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator HMGL-like PF00682.19 gi|407465289|ref|YP_006776171.1| - 2e-68 230.8 0.0 2.8e-68 230.3 0.0 1.1 1 0 0 1 1 1 1 HMGL-like Radical_SAM PF04055.21 gi|407465289|ref|YP_006776171.1| - 0.061 13.7 0.2 0.27 11.6 0.1 2.0 2 1 0 2 2 2 0 Radical SAM superfamily zf-RING_7 PF02591.15 gi|407465290|ref|YP_006776172.1| - 0.00014 21.9 1.0 0.0035 17.5 0.1 2.2 2 0 0 2 2 2 1 C4-type zinc ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|407465290|ref|YP_006776172.1| - 0.00015 21.6 7.2 0.0044 16.9 3.9 2.0 1 1 1 2 2 2 2 PhnA Zinc-Ribbon Zn-ribbon_8 PF09723.10 gi|407465290|ref|YP_006776172.1| - 0.0002 21.4 7.4 0.0052 16.9 2.5 1.5 1 1 1 2 2 2 2 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|407465290|ref|YP_006776172.1| - 0.00031 20.6 0.7 0.0025 17.7 0.9 1.9 1 1 0 1 1 1 1 zinc-ribbon domain zf-C4_Topoisom PF01396.19 gi|407465290|ref|YP_006776172.1| - 0.00036 20.2 0.3 0.054 13.3 0.0 2.1 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger zinc_ribbon_5 PF13719.6 gi|407465290|ref|YP_006776172.1| - 0.00064 19.4 0.3 0.073 12.8 0.0 2.1 2 0 0 2 2 2 1 zinc-ribbon domain zf_UBZ PF18439.1 gi|407465290|ref|YP_006776172.1| - 0.0011 18.6 1.7 0.4 10.3 0.1 2.2 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger Prok-RING_1 PF14446.6 gi|407465290|ref|YP_006776172.1| - 0.0028 17.6 3.3 0.0047 16.8 3.3 1.4 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 HypA PF01155.19 gi|407465290|ref|YP_006776172.1| - 0.0028 17.7 0.3 0.003 17.6 0.3 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-HYPF PF07503.12 gi|407465290|ref|YP_006776172.1| - 0.0044 16.8 1.3 0.029 14.2 1.3 1.9 1 1 0 1 1 1 1 HypF finger zinc_ribbon_9 PF14369.6 gi|407465290|ref|YP_006776172.1| - 0.0048 17.1 1.3 0.0072 16.6 1.3 1.2 1 0 0 1 1 1 1 zinc-ribbon zf-ribbon_3 PF13248.6 gi|407465290|ref|YP_006776172.1| - 0.0096 15.3 0.6 0.21 11.1 0.1 2.2 2 0 0 2 2 2 1 zinc-ribbon domain BssC_TutF PF08201.11 gi|407465290|ref|YP_006776172.1| - 0.011 15.7 0.5 0.13 12.2 0.1 2.0 2 0 0 2 2 2 0 BssC/TutF protein DZR PF12773.7 gi|407465290|ref|YP_006776172.1| - 0.013 15.5 0.4 0.018 15.1 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon ADK_lid PF05191.14 gi|407465290|ref|YP_006776172.1| - 0.039 13.9 0.4 0.17 11.9 0.0 1.9 2 0 0 2 2 2 0 Adenylate kinase, active site lid UPF0547 PF10571.9 gi|407465290|ref|YP_006776172.1| - 0.058 13.5 3.3 1.5 8.9 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DNA_RNApol_7kD PF03604.13 gi|407465290|ref|YP_006776172.1| - 0.067 12.9 2.7 0.21 11.3 2.7 1.7 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zinc-ribbons_6 PF07191.12 gi|407465290|ref|YP_006776172.1| - 0.07 13.1 1.0 0.17 11.9 1.0 1.6 1 1 0 1 1 1 0 zinc-ribbons CpXC PF14353.6 gi|407465290|ref|YP_006776172.1| - 0.075 13.1 1.2 0.91 9.6 0.1 2.0 1 1 1 2 2 2 0 CpXC protein A2L_zn_ribbon PF08792.10 gi|407465290|ref|YP_006776172.1| - 0.077 12.7 3.0 0.52 10.1 3.0 2.0 1 1 0 1 1 1 0 A2L zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|407465290|ref|YP_006776172.1| - 0.15 12.0 0.4 0.21 11.5 0.4 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C2H2_4 PF13894.6 gi|407465290|ref|YP_006776172.1| - 0.21 12.5 0.5 3.3 8.8 0.1 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger zf-ACC PF17848.1 gi|407465290|ref|YP_006776172.1| - 0.43 10.7 5.0 6.1 7.0 0.4 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf-C2H2 PF00096.26 gi|407465290|ref|YP_006776172.1| - 0.43 11.1 1.5 4.8 7.8 0.2 2.1 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 gi|407465290|ref|YP_006776172.1| - 0.58 10.7 2.1 2 9.0 0.0 2.0 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2_6 PF13912.6 gi|407465290|ref|YP_006776172.1| - 0.64 10.1 0.1 0.64 10.1 0.1 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger DUF1272 PF06906.11 gi|407465290|ref|YP_006776172.1| - 0.76 9.9 4.6 2.2 8.4 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) PADR1 PF08063.12 gi|407465290|ref|YP_006776172.1| - 0.78 9.6 3.5 2 8.2 0.1 2.1 1 1 1 2 2 2 0 PADR1 (NUC008) domain RimK PF08443.11 gi|407465291|ref|YP_006776173.1| - 1.4e-27 96.5 0.0 2e-27 96.0 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|407465291|ref|YP_006776173.1| - 4e-08 33.5 0.0 6.4e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.16 gi|407465291|ref|YP_006776173.1| - 2.2e-07 30.4 0.0 2.9e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_ST PF14397.6 gi|407465291|ref|YP_006776173.1| - 7.9e-06 25.3 0.1 0.022 14.0 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp CPSase_L_D2 PF02786.17 gi|407465291|ref|YP_006776173.1| - 0.0014 18.2 0.0 0.004 16.7 0.0 1.7 1 1 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|407465291|ref|YP_006776173.1| - 0.0017 17.9 0.0 0.0029 17.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|407465291|ref|YP_006776173.1| - 0.014 14.9 0.0 0.027 13.9 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|407465291|ref|YP_006776173.1| - 0.045 13.3 0.0 0.15 11.6 0.0 1.8 2 0 0 2 2 2 0 ATP-grasp domain Rimk_N PF18030.1 gi|407465291|ref|YP_006776173.1| - 0.06 13.7 0.1 0.27 11.7 0.0 2.0 1 1 0 2 2 2 0 RimK PreATP-grasp domain Peptidase_M20 PF01546.28 gi|407465292|ref|YP_006776174.1| - 3.4e-28 98.8 0.1 5.4e-28 98.1 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|407465292|ref|YP_006776174.1| - 7.1e-14 51.6 0.0 1.4e-13 50.7 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.14 gi|407465292|ref|YP_006776174.1| - 3.7e-05 22.9 0.7 0.059 12.4 0.1 2.5 2 1 1 3 3 3 2 M42 glutamyl aminopeptidase TP_methylase PF00590.20 gi|407465293|ref|YP_006776175.1| - 3e-19 69.8 0.0 3.7e-19 69.5 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.13 gi|407465294|ref|YP_006776176.1| - 7.7e-16 57.9 0.1 8.9e-16 57.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF357) Ala_racemase_C PF00842.21 gi|407465294|ref|YP_006776176.1| - 0.016 15.0 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Alanine racemase, C-terminal domain Alba PF01918.21 gi|407465294|ref|YP_006776176.1| - 0.084 12.7 0.0 0.16 11.8 0.0 1.5 2 0 0 2 2 2 0 Alba CTP_transf_like PF01467.26 gi|407465295|ref|YP_006776177.1| - 1.7e-13 50.9 0.1 2.8e-13 50.3 0.1 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|407465295|ref|YP_006776177.1| - 0.074 12.9 0.6 0.15 11.9 0.4 1.7 1 1 0 1 1 1 0 FAD synthetase Cullin_Nedd8 PF10557.9 gi|407465295|ref|YP_006776177.1| - 0.15 12.1 1.7 1.6 8.8 0.2 2.4 2 0 0 2 2 2 0 Cullin protein neddylation domain Glyco_tran_WecB PF03808.13 gi|407465295|ref|YP_006776177.1| - 0.17 11.8 0.2 0.31 11.0 0.0 1.6 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family Corona_NS1 PF06145.11 gi|407465295|ref|YP_006776177.1| - 1 8.9 3.3 1.4 8.5 0.1 2.3 2 0 0 2 2 2 0 Coronavirus nonstructural protein NS1 CTP-dep_RFKase PF01982.16 gi|407465296|ref|YP_006776178.1| - 1.5e-41 141.3 0.1 2.3e-41 140.7 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 MarR PF01047.22 gi|407465296|ref|YP_006776178.1| - 0.0092 15.9 0.0 0.021 14.7 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|407465296|ref|YP_006776178.1| - 0.06 13.5 0.2 0.14 12.4 0.2 1.7 1 1 0 1 1 1 0 Winged helix DNA-binding domain EFG_II PF14492.6 gi|407465296|ref|YP_006776178.1| - 0.14 12.2 0.1 0.6 10.2 0.1 2.0 1 1 0 1 1 1 0 Elongation Factor G, domain II Toprim_4 PF13662.6 gi|407465297|ref|YP_006776179.1| - 2.7e-07 30.9 0.2 6.1e-07 29.8 0.2 1.7 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|407465297|ref|YP_006776179.1| - 5.7e-05 23.5 0.0 0.00013 22.3 0.0 1.7 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|407465297|ref|YP_006776179.1| - 0.033 14.4 0.1 0.095 12.9 0.1 1.9 1 0 0 1 1 1 0 Toprim domain Fe-S_biosyn PF01521.20 gi|407465298|ref|YP_006776180.1| - 2.5e-23 82.4 0.0 2.8e-23 82.2 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis UPF0181 PF03701.14 gi|407465298|ref|YP_006776180.1| - 0.077 12.6 0.2 1.2 8.8 0.4 2.3 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0181) CBS PF00571.28 gi|407465299|ref|YP_006776181.1| - 3.1e-24 85.2 6.3 3.9e-13 49.6 0.8 2.1 2 0 0 2 2 2 2 CBS domain CopG_antitoxin PF12441.8 gi|407465300|ref|YP_006776182.1| - 0.00019 21.9 0.2 0.00093 19.7 0.1 2.1 2 0 0 2 2 2 1 CopG antitoxin of type II toxin-antitoxin system RHH_1 PF01402.21 gi|407465300|ref|YP_006776182.1| - 0.0073 16.2 0.0 0.016 15.1 0.0 1.6 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family HicB PF05534.12 gi|407465300|ref|YP_006776182.1| - 0.036 13.9 0.0 0.072 12.9 0.0 1.5 1 0 0 1 1 1 0 HicB family TrmB PF01978.19 gi|407465301|ref|YP_006776183.1| - 0.00074 19.4 0.1 0.0011 18.8 0.1 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FUR PF01475.19 gi|407465301|ref|YP_006776183.1| - 0.00092 19.4 0.1 0.0011 19.1 0.1 1.2 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_20 PF12840.7 gi|407465301|ref|YP_006776183.1| - 0.0024 17.9 0.0 0.0033 17.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Hpr_kinase_N PF02603.16 gi|407465301|ref|YP_006776183.1| - 0.0027 17.7 0.3 0.0036 17.3 0.3 1.2 1 0 0 1 1 1 1 HPr Serine kinase N terminus HTH_IclR PF09339.10 gi|407465301|ref|YP_006776183.1| - 0.017 14.9 0.0 0.036 13.9 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain DRTGG PF07085.12 gi|407465301|ref|YP_006776183.1| - 0.065 13.0 0.0 0.086 12.6 0.0 1.2 1 0 0 1 1 1 0 DRTGG domain Copper-bind PF00127.20 gi|407465302|ref|YP_006776184.1| - 1.7e-09 38.0 0.0 2.8e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|407465302|ref|YP_006776184.1| - 4.7e-06 26.6 0.0 9.8e-06 25.6 0.0 1.6 2 0 0 2 2 2 1 Cupredoxin-like domain ECH_1 PF00378.20 gi|407465303|ref|YP_006776185.1| - 1.3e-68 231.1 1.3 1.4e-68 230.9 1.3 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|407465303|ref|YP_006776185.1| - 7.6e-39 134.1 0.5 1.7e-35 123.1 0.1 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase ATP-grasp_5 PF13549.6 gi|407465304|ref|YP_006776186.1| - 2.1e-67 226.8 0.6 3.3e-67 226.2 0.6 1.3 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|407465304|ref|YP_006776186.1| - 1.5e-48 164.1 0.9 2.5e-48 163.4 0.2 1.7 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|407465304|ref|YP_006776186.1| - 5.1e-26 91.5 0.1 2.2e-25 89.4 0.1 2.1 2 0 0 2 2 2 1 CoA binding domain CoA_binding PF02629.19 gi|407465304|ref|YP_006776186.1| - 1.8e-09 38.1 0.3 1e-08 35.7 0.3 2.4 1 0 0 1 1 1 1 CoA binding domain ATP-grasp_2 PF08442.10 gi|407465304|ref|YP_006776186.1| - 7.2e-08 32.2 0.5 1.5e-07 31.2 0.5 1.7 1 0 0 1 1 1 1 ATP-grasp domain TPP_enzyme_M PF00205.22 gi|407465304|ref|YP_006776186.1| - 0.036 13.8 0.7 3.1 7.5 0.0 3.3 3 0 0 3 3 3 0 Thiamine pyrophosphate enzyme, central domain GFO_IDH_MocA PF01408.22 gi|407465304|ref|YP_006776186.1| - 0.066 14.0 0.0 0.17 12.7 0.0 1.8 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold ATP-grasp PF02222.22 gi|407465304|ref|YP_006776186.1| - 0.078 12.5 0.0 0.18 11.3 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain Sacchrp_dh_NADP PF03435.18 gi|407465304|ref|YP_006776186.1| - 0.1 12.8 0.2 0.3 11.4 0.2 1.9 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain baeRF_family2 PF18844.1 gi|407465304|ref|YP_006776186.1| - 0.2 11.7 0.1 0.35 10.9 0.1 1.3 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 GATase PF00117.28 gi|407465305|ref|YP_006776187.1| - 1.2e-19 70.9 0.0 1.6e-19 70.4 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|407465305|ref|YP_006776187.1| - 5.5e-06 26.3 0.0 1.6e-05 24.8 0.0 1.7 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.14 gi|407465305|ref|YP_006776187.1| - 0.01 15.4 0.0 0.018 14.7 0.0 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|407465305|ref|YP_006776187.1| - 0.037 13.8 0.0 0.057 13.2 0.0 1.2 1 0 0 1 1 1 0 DJ-1/PfpI family ABC_transp_aux PF09822.9 gi|407465305|ref|YP_006776187.1| - 0.045 13.2 0.0 0.085 12.3 0.0 1.4 1 0 0 1 1 1 0 ABC-type uncharacterized transport system Cactin_mid PF10312.9 gi|407465306|ref|YP_006776188.1| - 0.018 14.8 0.2 0.019 14.7 0.2 1.0 1 0 0 1 1 1 0 Conserved mid region of cactin Toprim_4 PF13662.6 gi|407465307|ref|YP_006776189.1| - 6.3e-06 26.6 0.0 0.00019 21.9 0.0 2.2 1 1 0 1 1 1 1 Toprim domain Toprim PF01751.22 gi|407465307|ref|YP_006776189.1| - 0.0046 17.1 0.1 0.069 13.4 0.1 2.1 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|407465307|ref|YP_006776189.1| - 0.0087 16.5 0.0 0.013 15.9 0.0 1.4 1 1 0 1 1 1 1 Toprim-like Toprim_3 PF13362.6 gi|407465307|ref|YP_006776189.1| - 0.16 12.4 0.0 0.23 11.8 0.0 1.3 1 1 0 1 1 1 0 Toprim domain ELFV_dehydrog PF00208.21 gi|407465308|ref|YP_006776190.1| - 7.7e-66 222.3 2.0 1.1e-65 221.8 2.0 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|407465308|ref|YP_006776190.1| - 1.9e-48 163.6 0.0 3.9e-48 162.6 0.0 1.5 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HTH_5 PF01022.20 gi|407465309|ref|YP_006776191.1| - 4.2e-07 29.7 0.8 6.8e-07 29.0 0.2 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|407465309|ref|YP_006776191.1| - 0.00062 19.8 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|407465309|ref|YP_006776191.1| - 0.0066 16.6 1.7 0.012 15.7 0.2 2.1 2 1 0 2 2 2 1 B-block binding subunit of TFIIIC HTH_24 PF13412.6 gi|407465309|ref|YP_006776191.1| - 0.0068 15.9 0.4 0.018 14.6 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|407465309|ref|YP_006776191.1| - 0.019 14.9 0.3 2.4 8.2 0.0 3.0 3 0 0 3 3 3 0 MarR family HTH_41 PF14502.6 gi|407465309|ref|YP_006776191.1| - 0.031 14.0 0.1 7.8 6.3 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|407465309|ref|YP_006776191.1| - 0.039 13.9 0.3 0.039 13.9 0.3 2.0 3 0 0 3 3 3 0 Winged helix-turn-helix TrmB PF01978.19 gi|407465309|ref|YP_006776191.1| - 0.063 13.2 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 gi|407465309|ref|YP_006776191.1| - 0.066 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_9 PF08221.11 gi|407465309|ref|YP_006776191.1| - 0.099 12.8 0.2 0.2 11.8 0.2 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_1 PF00126.27 gi|407465309|ref|YP_006776191.1| - 0.12 12.4 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Proteasome PF00227.26 gi|407465310|ref|YP_006776192.1| - 1.7e-48 164.6 1.8 2.2e-48 164.3 1.8 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|407465310|ref|YP_006776192.1| - 2e-12 46.5 1.7 1.3e-10 40.8 0.2 2.6 2 0 0 2 2 2 2 Proteasome subunit A N-terminal signature Ubie_methyltran PF01209.18 gi|407465311|ref|YP_006776193.1| - 8.7e-20 71.0 0.0 1.1e-19 70.7 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 gi|407465311|ref|YP_006776193.1| - 1.9e-13 50.9 0.0 2.9e-13 50.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407465311|ref|YP_006776193.1| - 2.8e-11 44.0 0.0 4.1e-11 43.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|407465311|ref|YP_006776193.1| - 9.5e-08 32.0 0.0 1.8e-07 31.1 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|407465311|ref|YP_006776193.1| - 2.7e-06 27.3 0.0 3.2e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|407465311|ref|YP_006776193.1| - 5e-05 24.0 0.0 0.0001 23.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|407465311|ref|YP_006776193.1| - 0.00063 19.7 0.0 0.0011 18.9 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase CMAS PF02353.20 gi|407465311|ref|YP_006776193.1| - 0.09 12.1 0.0 0.15 11.3 0.0 1.5 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase N2227 PF07942.12 gi|407465311|ref|YP_006776193.1| - 0.16 11.1 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 N2227-like protein MFS_1 PF07690.16 gi|407465312|ref|YP_006776194.1| - 2.3e-48 164.9 64.1 7.2e-35 120.5 33.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|407465312|ref|YP_006776194.1| - 2.8e-14 53.2 17.9 3.6e-14 52.8 17.9 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Phage_holin_8 PF16931.5 gi|407465312|ref|YP_006776194.1| - 0.0012 18.8 0.1 0.0012 18.8 0.1 2.4 2 0 0 2 2 2 1 Putative phage holin OATP PF03137.20 gi|407465312|ref|YP_006776194.1| - 0.0037 15.6 13.6 0.017 13.5 3.1 3.3 1 1 1 3 3 3 2 Organic Anion Transporter Polypeptide (OATP) family MASE2 PF05230.11 gi|407465312|ref|YP_006776194.1| - 0.016 15.2 0.2 0.016 15.2 0.2 3.4 4 0 0 4 4 4 0 MASE2 domain ATG27 PF09451.10 gi|407465312|ref|YP_006776194.1| - 0.17 11.7 0.3 0.53 10.1 0.1 1.7 2 0 0 2 2 2 0 Autophagy-related protein 27 DUF983 PF06170.12 gi|407465312|ref|YP_006776194.1| - 3.9 7.9 0.0 3.9 7.9 0.0 3.9 4 0 0 4 4 4 0 Protein of unknown function (DUF983) P-II PF00543.22 gi|407465313|ref|YP_006776195.1| - 1.9e-16 60.5 4.1 4.7e-16 59.3 4.1 1.6 1 1 0 1 1 1 1 Nitrogen regulatory protein P-II MttA_Hcf106 PF02416.16 gi|407465314|ref|YP_006776196.1| - 2.5e-09 36.3 1.1 3.8e-09 35.7 1.1 1.6 1 1 0 1 1 1 1 mttA/Hcf106 family DUF948 PF06103.11 gi|407465314|ref|YP_006776196.1| - 0.031 14.5 0.0 0.04 14.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF228 PF02989.14 gi|407465314|ref|YP_006776196.1| - 0.053 13.3 0.5 0.064 13.1 0.5 1.1 1 0 0 1 1 1 0 Lyme disease proteins of unknown function DUF4389 PF14333.6 gi|407465314|ref|YP_006776196.1| - 0.073 13.0 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4389) OAD_gamma PF04277.13 gi|407465314|ref|YP_006776196.1| - 0.079 13.6 0.3 0.079 13.6 0.3 1.6 1 1 1 2 2 2 0 Oxaloacetate decarboxylase, gamma chain N6_N4_Mtase PF01555.18 gi|407465315|ref|YP_006776197.1| - 6.6e-37 127.4 4.3 7.9e-37 127.2 4.3 1.1 1 0 0 1 1 1 1 DNA methylase N6_Mtase PF02384.16 gi|407465315|ref|YP_006776197.1| - 8.1e-07 28.6 0.1 0.00035 19.9 0.2 2.1 2 0 0 2 2 2 2 N-6 DNA Methylase UPF0020 PF01170.18 gi|407465315|ref|YP_006776197.1| - 0.00034 20.4 0.0 0.079 12.6 0.0 2.5 2 1 0 2 2 2 2 Putative RNA methylase family UPF0020 MethyltransfD12 PF02086.15 gi|407465315|ref|YP_006776197.1| - 0.0034 17.1 0.4 0.033 13.9 0.0 2.1 2 0 0 2 2 2 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_8 PF05148.15 gi|407465315|ref|YP_006776197.1| - 0.011 15.7 0.1 0.71 9.7 0.0 2.3 2 0 0 2 2 2 0 Hypothetical methyltransferase N6-adenineMlase PF10237.9 gi|407465315|ref|YP_006776197.1| - 0.028 14.2 0.0 0.057 13.2 0.0 1.6 2 0 0 2 2 2 0 Probable N6-adenine methyltransferase DEAD PF00270.29 gi|407465316|ref|YP_006776198.1| - 7.5e-34 117.0 0.4 3.7e-33 114.8 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|407465316|ref|YP_006776198.1| - 3.5e-18 66.0 1.8 1.6e-14 54.2 0.6 3.0 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DUF1998 PF09369.10 gi|407465316|ref|YP_006776198.1| - 5.7e-10 39.8 0.1 1.8e-09 38.2 0.1 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) Elf1 PF05129.13 gi|407465316|ref|YP_006776198.1| - 0.026 14.6 1.4 0.097 12.7 1.4 2.0 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zinc_ribbon_4 PF13717.6 gi|407465316|ref|YP_006776198.1| - 7.4 6.6 14.9 0.66 10.0 5.8 2.8 2 1 0 2 2 2 0 zinc-ribbon domain adh_short PF00106.25 gi|407465317|ref|YP_006776199.1| - 1.7e-54 184.2 0.0 2.3e-54 183.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|407465317|ref|YP_006776199.1| - 3.2e-40 138.2 0.0 4.1e-40 137.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|407465317|ref|YP_006776199.1| - 1e-10 41.8 0.0 1.5e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 gi|407465317|ref|YP_006776199.1| - 8.9e-05 22.0 0.0 0.00034 20.1 0.0 1.8 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) NmrA PF05368.13 gi|407465317|ref|YP_006776199.1| - 0.00023 20.8 0.3 0.003 17.2 0.1 2.0 2 0 0 2 2 2 1 NmrA-like family NAD_binding_10 PF13460.6 gi|407465317|ref|YP_006776199.1| - 0.0022 17.9 0.0 0.0063 16.4 0.0 1.8 2 0 0 2 2 2 1 NAD(P)H-binding Epimerase PF01370.21 gi|407465317|ref|YP_006776199.1| - 0.019 14.4 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Eno-Rase_NADH_b PF12242.8 gi|407465317|ref|YP_006776199.1| - 0.1 12.3 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DNA_pol_lambd_f PF10391.9 gi|407465317|ref|YP_006776199.1| - 0.13 12.1 0.0 0.72 9.7 0.0 2.1 2 0 0 2 2 2 0 Fingers domain of DNA polymerase lambda Topoisom_I_N PF02919.15 gi|407465318|ref|YP_006776200.1| - 2.5e-70 236.3 8.1 2.5e-70 236.3 8.1 3.1 2 1 1 3 3 3 1 Eukaryotic DNA topoisomerase I, DNA binding fragment Topoisom_I PF01028.20 gi|407465318|ref|YP_006776200.1| - 4.3e-70 235.6 13.0 4.3e-70 235.6 13.0 2.5 2 1 1 3 3 3 1 Eukaryotic DNA topoisomerase I, catalytic core Topo_C_assoc PF14370.6 gi|407465318|ref|YP_006776200.1| - 1.2e-19 70.0 1.4 1.2e-19 70.0 1.4 4.2 3 2 0 3 3 3 1 C-terminal topoisomerase domain HD_assoc PF13286.6 gi|407465318|ref|YP_006776200.1| - 0.065 13.8 0.6 0.3 11.6 0.6 2.2 1 0 0 1 1 1 0 Phosphohydrolase-associated domain MG2 PF01835.19 gi|407465319|ref|YP_006776201.1| - 0.0034 17.8 0.0 0.011 16.2 0.0 1.8 2 0 0 2 2 2 1 MG2 domain PLDc PF00614.22 gi|407465319|ref|YP_006776201.1| - 0.19 12.0 2.4 0.23 11.7 0.2 2.3 2 0 0 2 2 2 0 Phospholipase D Active site motif YMF19 PF02326.15 gi|407465319|ref|YP_006776201.1| - 2 9.3 6.4 0.44 11.4 1.7 2.4 3 0 0 3 3 3 0 Plant ATP synthase F0 TF_Zn_Ribbon PF08271.12 gi|407465320|ref|YP_006776202.1| - 0.07 12.7 3.8 0.17 11.4 3.8 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding TraK PF06586.11 gi|407465320|ref|YP_006776202.1| - 0.14 11.8 0.7 0.15 11.7 0.7 1.1 1 0 0 1 1 1 0 TraK protein Zn-ribbon_8 PF09723.10 gi|407465320|ref|YP_006776202.1| - 0.19 11.9 1.8 0.36 11.0 1.8 1.4 1 0 0 1 1 1 0 Zinc ribbon domain TFIIB PF00382.19 gi|407465321|ref|YP_006776203.1| - 1.1e-28 99.0 9.7 1.9e-15 56.6 0.3 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|407465321|ref|YP_006776203.1| - 8.5e-07 28.4 0.5 1.5e-06 27.6 0.5 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_11 PF08279.12 gi|407465321|ref|YP_006776203.1| - 0.022 14.7 3.0 4.6 7.3 0.1 2.8 3 0 0 3 3 3 0 HTH domain Cyclin_C PF02984.19 gi|407465321|ref|YP_006776203.1| - 0.04 14.0 1.2 1.7 8.7 0.1 2.3 1 1 0 2 2 2 0 Cyclin, C-terminal domain GntR PF00392.21 gi|407465321|ref|YP_006776203.1| - 0.064 12.9 0.2 2.7 7.7 0.0 3.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family DZR PF12773.7 gi|407465321|ref|YP_006776203.1| - 0.067 13.2 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 Double zinc ribbon HTH_Mga PF08280.11 gi|407465321|ref|YP_006776203.1| - 0.087 12.9 0.9 1.6 8.9 0.1 2.8 3 0 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain Cyclin_N PF00134.23 gi|407465321|ref|YP_006776203.1| - 0.096 12.4 1.7 0.12 12.2 0.2 1.8 2 0 0 2 2 2 0 Cyclin, N-terminal domain Flagellin_C PF00700.21 gi|407465321|ref|YP_006776203.1| - 0.13 12.7 1.0 2.5 8.5 0.8 2.5 2 1 0 2 2 2 0 Bacterial flagellin C-terminal helical region HTH_Tnp_ISL3 PF13542.6 gi|407465321|ref|YP_006776203.1| - 0.26 10.8 1.1 6.9 6.2 0.1 3.2 3 1 1 4 4 4 0 Helix-turn-helix domain of transposase family ISL3 GerE PF00196.19 gi|407465321|ref|YP_006776203.1| - 8.4 6.0 6.8 5.8 6.5 0.1 3.6 4 0 0 4 4 4 0 Bacterial regulatory proteins, luxR family OrfB_Zn_ribbon PF07282.11 gi|407465322|ref|YP_006776204.1| - 0.0026 17.7 2.8 0.0028 17.6 2.8 1.0 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Ima1_N PF09779.9 gi|407465322|ref|YP_006776204.1| - 0.0056 17.5 2.4 0.0056 17.5 2.4 1.0 1 0 0 1 1 1 1 Ima1 N-terminal domain DUF2318 PF10080.9 gi|407465322|ref|YP_006776204.1| - 0.026 14.7 1.7 0.029 14.5 1.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) Zn_Tnp_IS1595 PF12760.7 gi|407465322|ref|YP_006776204.1| - 0.029 14.3 1.6 0.035 14.1 1.6 1.1 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|407465322|ref|YP_006776204.1| - 0.029 14.5 1.7 0.041 14.0 1.7 1.2 1 0 0 1 1 1 0 Zinc ribbon domain HypA PF01155.19 gi|407465322|ref|YP_006776204.1| - 0.045 13.8 2.2 0.047 13.7 2.2 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MRNIP PF15749.5 gi|407465322|ref|YP_006776204.1| - 0.047 14.4 2.9 0.056 14.2 2.9 1.2 1 0 0 1 1 1 0 MRN-interacting protein zf-C2H2_6 PF13912.6 gi|407465322|ref|YP_006776204.1| - 0.088 12.8 3.0 4.8 7.3 0.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger zf-BED PF02892.15 gi|407465322|ref|YP_006776204.1| - 0.12 12.4 0.1 0.12 12.4 0.1 2.0 1 1 1 2 2 2 0 BED zinc finger C1_2 PF03107.16 gi|407465322|ref|YP_006776204.1| - 0.15 12.4 4.5 0.5 10.7 4.5 1.7 1 1 0 1 1 1 0 C1 domain zf-RanBP PF00641.18 gi|407465322|ref|YP_006776204.1| - 1.7 8.1 9.9 0.44 9.9 2.2 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zinc_ribbon_6 PF14599.6 gi|407465323|ref|YP_006776205.1| - 0.13 12.2 3.8 0.29 11.2 3.8 1.7 1 1 0 1 1 1 0 Zinc-ribbon DNA_RNApol_7kD PF03604.13 gi|407465323|ref|YP_006776205.1| - 0.23 11.2 5.3 0.58 9.9 4.9 1.9 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit FtsH_ext PF06480.15 gi|407465324|ref|YP_006776206.1| - 0.0028 18.0 0.1 0.0032 17.8 0.1 1.1 1 0 0 1 1 1 1 FtsH Extracellular DUF5385 PF17359.2 gi|407465324|ref|YP_006776206.1| - 0.029 14.0 0.1 0.036 13.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5385) ABC2_membrane_3 PF12698.7 gi|407465324|ref|YP_006776206.1| - 0.077 12.1 0.1 0.077 12.1 0.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2749 PF10907.8 gi|407465324|ref|YP_006776206.1| - 0.12 12.6 0.2 0.5 10.6 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) DUF4377 PF14302.6 gi|407465325|ref|YP_006776207.1| - 4.6e-26 90.7 0.1 1.2e-25 89.4 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4377) Kazal_1 PF00050.21 gi|407465325|ref|YP_006776207.1| - 0.0038 17.2 5.6 0.014 15.4 5.6 2.0 1 1 0 1 1 1 1 Kazal-type serine protease inhibitor domain Kazal_2 PF07648.15 gi|407465325|ref|YP_006776207.1| - 0.0073 16.4 6.8 0.024 14.8 6.8 1.9 1 1 0 1 1 1 1 Kazal-type serine protease inhibitor domain tRNA-synt_1f PF01921.18 gi|407465325|ref|YP_006776207.1| - 0.02 13.8 0.7 0.031 13.2 0.7 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (K) SDF PF00375.18 gi|407465327|ref|YP_006776209.1| - 5.1e-113 378.0 43.4 5.8e-113 377.8 43.4 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family DUF5379 PF17350.2 gi|407465327|ref|YP_006776209.1| - 3.3 8.1 12.1 3.5 8.0 1.3 3.6 3 1 0 3 3 3 0 Family of unknown function (DUF5379) AsnC_trans_reg PF01037.21 gi|407465328|ref|YP_006776210.1| - 3.8e-12 46.0 0.0 4.3e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain ACT_4 PF13291.6 gi|407465328|ref|YP_006776210.1| - 0.065 13.8 0.0 16 6.2 0.0 2.1 2 0 0 2 2 2 0 ACT domain SHOCT PF09851.9 gi|407465330|ref|YP_006776212.1| - 2.5e-05 23.9 5.1 5.9e-05 22.7 5.1 1.7 1 0 0 1 1 1 1 Short C-terminal domain DUF2161 PF09929.9 gi|407465330|ref|YP_006776212.1| - 0.021 15.0 2.3 0.079 13.1 1.5 1.9 2 0 0 2 2 2 0 Putative PD-(D/E)XK phosphodiesterase (DUF2161) PRC PF05239.16 gi|407465331|ref|YP_006776213.1| - 2e-10 40.6 2.5 4.7e-05 23.4 2.9 2.1 2 0 0 2 2 2 2 PRC-barrel domain DUF2171 PF09939.9 gi|407465331|ref|YP_006776213.1| - 4.3e-05 23.7 0.1 0.0037 17.5 0.7 2.3 2 1 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2171) GTP_EFTU_D4 PF14578.6 gi|407465331|ref|YP_006776213.1| - 0.018 14.9 0.4 0.26 11.2 0.2 2.2 2 0 0 2 2 2 0 Elongation factor Tu domain 4 MlaD PF02470.20 gi|407465331|ref|YP_006776213.1| - 0.023 15.0 0.3 0.063 13.6 0.3 1.8 1 1 1 2 2 2 0 MlaD protein FGase PF05013.12 gi|407465332|ref|YP_006776214.1| - 1.7e-46 159.2 0.0 1.9e-46 159.0 0.0 1.0 1 0 0 1 1 1 1 N-formylglutamate amidohydrolase G_glu_transpept PF01019.21 gi|407465333|ref|YP_006776215.1| - 8e-113 377.9 0.0 9.1e-113 377.7 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase Ion_trans PF00520.31 gi|407465334|ref|YP_006776216.1| - 1.6e-31 109.4 12.4 1.8e-31 109.2 12.4 1.0 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 gi|407465334|ref|YP_006776216.1| - 2.9e-13 49.6 9.0 3.1e-13 49.5 5.4 2.5 2 0 0 2 2 2 1 Ion channel zf-ribbon_3 PF13248.6 gi|407465334|ref|YP_006776216.1| - 0.15 11.5 0.9 0.26 10.8 0.9 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Lig_chan PF00060.26 gi|407465334|ref|YP_006776216.1| - 0.49 10.2 2.2 0.35 10.7 0.1 1.8 2 0 0 2 2 2 0 Ligand-gated ion channel CorA PF01544.18 gi|407465335|ref|YP_006776217.1| - 5.4e-69 232.7 4.2 5.4e-69 232.7 4.2 2.3 2 0 0 2 2 2 1 CorA-like Mg2+ transporter protein Noelin-1 PF12308.8 gi|407465335|ref|YP_006776217.1| - 0.089 12.8 0.3 3.9 7.5 0.0 2.6 2 0 0 2 2 2 0 Neurogenesis glycoprotein Phage-MuB_C PF09077.11 gi|407465335|ref|YP_006776217.1| - 0.11 12.4 0.1 2.7 8.0 0.0 2.6 2 0 0 2 2 2 0 Mu B transposition protein, C terminal TssO PF17561.2 gi|407465335|ref|YP_006776217.1| - 1.9 8.6 6.1 4.6 7.4 0.1 3.5 4 1 0 4 4 4 0 Type VI secretion system, TssO Dala_Dala_lig_C PF07478.13 gi|407465336|ref|YP_006776218.1| - 6.7e-33 114.0 0.0 1.1e-32 113.3 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_4 PF13535.6 gi|407465336|ref|YP_006776218.1| - 1.1e-12 47.9 0.2 1.1e-11 44.6 0.0 2.9 2 1 0 2 2 2 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|407465336|ref|YP_006776218.1| - 5.7e-12 46.0 0.2 1.5e-11 44.6 0.1 1.7 2 0 0 2 2 2 1 ATP-grasp domain Peptidase_M20 PF01546.28 gi|407465336|ref|YP_006776218.1| - 6.5e-11 42.3 0.0 1.9e-10 40.8 0.0 1.8 2 0 0 2 2 2 1 Peptidase family M20/M25/M40 CPSase_L_D2 PF02786.17 gi|407465336|ref|YP_006776218.1| - 3.5e-08 33.2 0.0 6.4e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain RimK PF08443.11 gi|407465336|ref|YP_006776218.1| - 6e-07 29.3 0.1 1.1e-05 25.1 0.1 2.3 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|407465336|ref|YP_006776218.1| - 8.7e-05 22.3 0.0 0.0002 21.1 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.22 gi|407465336|ref|YP_006776218.1| - 0.00019 21.1 0.0 0.0039 16.8 0.0 2.6 2 1 0 2 2 2 1 ATP-grasp domain GARS_A PF01071.19 gi|407465336|ref|YP_006776218.1| - 0.00059 19.7 0.0 0.0012 18.6 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_ST PF14397.6 gi|407465336|ref|YP_006776218.1| - 0.026 13.8 0.0 0.27 10.5 0.0 2.2 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp YqgF PF14639.6 gi|407465336|ref|YP_006776218.1| - 0.24 11.2 1.3 14 5.4 0.0 3.0 3 0 0 3 3 3 0 Holliday-junction resolvase-like of SPT6 Amidohydro_2 PF04909.14 gi|407465337|ref|YP_006776219.1| - 6.8e-34 118.0 0.0 1e-33 117.4 0.0 1.3 1 1 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.21 gi|407465337|ref|YP_006776219.1| - 0.00084 18.8 0.0 0.0014 18.0 0.0 1.4 1 1 0 1 1 1 1 TatD related DNase Acetyltransf_1 PF00583.25 gi|407465338|ref|YP_006776220.1| - 9.5e-10 38.7 0.0 1.6e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 gi|407465338|ref|YP_006776220.1| - 0.00018 21.6 0.0 0.45 10.6 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|407465338|ref|YP_006776220.1| - 0.00086 19.7 0.0 0.0024 18.3 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Snapin_Pallidin PF14712.6 gi|407465341|ref|YP_006776223.1| - 0.013 15.9 0.9 0.013 15.9 0.9 2.6 2 1 0 2 2 2 0 Snapin/Pallidin V-SNARE PF05008.15 gi|407465341|ref|YP_006776223.1| - 0.097 13.1 0.1 0.097 13.1 0.1 2.8 2 2 1 3 3 3 0 Vesicle transport v-SNARE protein N-terminus HIP1_clath_bdg PF16515.5 gi|407465341|ref|YP_006776223.1| - 0.17 12.5 6.5 0.43 11.2 1.3 2.8 2 2 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Spectrin PF00435.21 gi|407465341|ref|YP_006776223.1| - 0.17 12.4 5.4 0.65 10.5 0.3 2.4 2 0 0 2 2 2 0 Spectrin repeat ABC_tran_CTD PF16326.5 gi|407465341|ref|YP_006776223.1| - 0.25 11.6 6.7 0.24 11.7 0.5 2.9 2 1 0 2 2 2 0 ABC transporter C-terminal domain BRE1 PF08647.11 gi|407465341|ref|YP_006776223.1| - 0.27 11.3 9.9 0.34 11.0 0.6 2.5 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase DUF4140 PF13600.6 gi|407465341|ref|YP_006776223.1| - 0.28 11.7 11.7 10 6.6 1.2 4.3 2 2 2 4 4 4 0 N-terminal domain of unknown function (DUF4140) DUF1664 PF07889.12 gi|407465341|ref|YP_006776223.1| - 0.75 9.8 8.3 0.39 10.8 0.2 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) CCDC-167 PF15188.6 gi|407465341|ref|YP_006776223.1| - 0.76 10.2 10.6 1.6 9.1 1.3 2.9 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 MscS_porin PF12795.7 gi|407465341|ref|YP_006776223.1| - 1 8.9 8.9 0.2 11.2 0.4 2.2 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain Med9 PF07544.13 gi|407465341|ref|YP_006776223.1| - 1.1 9.4 12.1 1.4 9.1 0.2 3.9 2 2 1 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 TBCC_N PF16752.5 gi|407465341|ref|YP_006776223.1| - 1.2 9.6 6.2 3.3 8.2 0.1 2.5 2 0 0 2 2 2 0 Tubulin-specific chaperone C N-terminal domain FlxA PF14282.6 gi|407465341|ref|YP_006776223.1| - 1.8 8.6 13.1 0.31 11.1 1.1 2.6 2 0 0 2 2 2 0 FlxA-like protein NPV_P10 PF05531.12 gi|407465341|ref|YP_006776223.1| - 1.9 9.0 9.8 1.7 9.2 1.0 3.9 2 2 0 2 2 2 0 Nucleopolyhedrovirus P10 protein LPP PF04728.13 gi|407465341|ref|YP_006776223.1| - 6.3 7.3 8.1 37 4.8 0.0 4.1 5 0 0 5 5 5 0 Lipoprotein leucine-zipper Cnn_1N PF07989.11 gi|407465341|ref|YP_006776223.1| - 9.7 6.4 9.1 2.6 8.3 1.3 3.4 3 1 0 3 3 3 0 Centrosomin N-terminal motif 1 FlxA PF14282.6 gi|407465342|ref|YP_006776224.1| - 0.00013 21.9 12.5 0.047 13.7 2.0 3.0 2 1 0 2 2 2 2 FlxA-like protein DUF4140 PF13600.6 gi|407465342|ref|YP_006776224.1| - 0.0023 18.3 7.3 1.1 9.7 0.7 3.8 2 2 1 3 3 3 2 N-terminal domain of unknown function (DUF4140) NPV_P10 PF05531.12 gi|407465342|ref|YP_006776224.1| - 0.0048 17.3 8.2 0.059 13.8 0.9 3.4 2 1 1 3 3 3 1 Nucleopolyhedrovirus P10 protein Med9 PF07544.13 gi|407465342|ref|YP_006776224.1| - 0.01 15.9 6.1 0.023 14.7 1.1 2.9 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 CSN5_C PF18323.1 gi|407465342|ref|YP_006776224.1| - 0.015 16.2 8.3 0.31 12.0 0.3 3.1 3 0 0 3 3 3 0 Cop9 signalosome subunit 5 C-terminal domain Cnn_1N PF07989.11 gi|407465342|ref|YP_006776224.1| - 0.017 15.3 6.7 0.22 11.7 1.3 3.0 3 0 0 3 3 2 0 Centrosomin N-terminal motif 1 DUF5344 PF17279.2 gi|407465342|ref|YP_006776224.1| - 0.017 15.7 3.7 1.2 9.7 0.4 3.0 2 1 0 2 2 2 0 Family of unknown function (DUF5344) LPP PF04728.13 gi|407465342|ref|YP_006776224.1| - 0.018 15.4 8.9 0.28 11.6 0.6 3.5 3 1 0 3 3 3 0 Lipoprotein leucine-zipper CorA PF01544.18 gi|407465342|ref|YP_006776224.1| - 0.027 13.8 1.1 0.18 11.1 0.0 2.1 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF4763 PF15960.5 gi|407465342|ref|YP_006776224.1| - 0.027 13.8 1.6 0.58 9.4 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4763) Wtap PF17098.5 gi|407465342|ref|YP_006776224.1| - 0.028 14.4 5.0 0.37 10.7 1.5 2.5 2 0 0 2 2 2 0 WTAP/Mum2p family Ax_dynein_light PF10211.9 gi|407465342|ref|YP_006776224.1| - 0.031 14.2 3.9 0.21 11.5 0.7 2.5 2 0 0 2 2 2 0 Axonemal dynein light chain YabA PF06156.13 gi|407465342|ref|YP_006776224.1| - 0.05 14.2 4.1 1.7 9.3 0.4 2.9 2 1 0 2 2 2 0 Initiation control protein YabA Atg14 PF10186.9 gi|407465342|ref|YP_006776224.1| - 0.079 12.0 10.5 0.086 11.9 0.6 3.0 3 0 0 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 Filament PF00038.21 gi|407465342|ref|YP_006776224.1| - 0.084 12.4 2.5 2.1 7.9 0.4 2.4 2 0 0 2 2 2 0 Intermediate filament protein Swi5 PF07061.11 gi|407465342|ref|YP_006776224.1| - 0.1 12.7 10.6 2.2 8.4 1.3 3.7 3 1 0 3 3 3 0 Swi5 DUF2019 PF09450.10 gi|407465342|ref|YP_006776224.1| - 0.11 12.5 0.3 0.4 10.6 0.0 2.1 2 0 0 2 2 1 0 Domain of unknown function (DUF2019) FlaC_arch PF05377.11 gi|407465342|ref|YP_006776224.1| - 0.13 12.7 7.8 3.8 8.0 0.2 3.7 3 1 0 3 3 2 0 Flagella accessory protein C (FlaC) OmpH PF03938.14 gi|407465342|ref|YP_006776224.1| - 0.13 12.6 5.0 5.9 7.2 0.0 2.8 3 1 0 3 3 3 0 Outer membrane protein (OmpH-like) Apolipoprotein PF01442.18 gi|407465342|ref|YP_006776224.1| - 0.15 11.9 9.7 0.15 11.9 1.4 2.6 2 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain Noelin-1 PF12308.8 gi|407465342|ref|YP_006776224.1| - 0.21 11.6 0.9 6.8 6.7 0.2 2.7 2 1 0 2 2 2 0 Neurogenesis glycoprotein Med4 PF10018.9 gi|407465342|ref|YP_006776224.1| - 0.25 11.0 4.6 0.19 11.4 0.3 2.3 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Allexi_40kDa PF05549.11 gi|407465342|ref|YP_006776224.1| - 0.3 10.5 2.9 3.6 7.0 0.1 2.4 2 0 0 2 2 2 0 Allexivirus 40kDa protein DUF5082 PF16888.5 gi|407465342|ref|YP_006776224.1| - 0.39 11.0 17.7 1.5 9.1 0.1 4.6 4 1 1 5 5 5 0 Domain of unknown function (DUF5082) DUF1319 PF07028.11 gi|407465342|ref|YP_006776224.1| - 0.4 10.9 4.3 8.7 6.6 0.5 3.1 2 2 0 2 2 2 0 Protein of unknown function (DUF1319) EzrA PF06160.12 gi|407465342|ref|YP_006776224.1| - 0.44 8.7 7.1 0.38 8.9 1.1 2.1 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA CCDC-167 PF15188.6 gi|407465342|ref|YP_006776224.1| - 0.49 10.8 7.8 4.9 7.6 0.5 2.6 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 APG6_N PF17675.1 gi|407465342|ref|YP_006776224.1| - 0.58 10.7 5.3 8.2 7.0 0.1 2.7 3 0 0 3 3 2 0 Apg6 coiled-coil region NleF_casp_inhib PF16809.5 gi|407465342|ref|YP_006776224.1| - 0.68 9.8 4.5 0.82 9.6 0.1 2.5 3 0 0 3 3 2 0 NleF caspase inhibitor Tropomyosin_1 PF12718.7 gi|407465342|ref|YP_006776224.1| - 0.72 10.0 10.3 0.55 10.4 0.3 2.8 3 0 0 3 3 3 0 Tropomyosin like DUF4094 PF13334.6 gi|407465342|ref|YP_006776224.1| - 0.74 10.3 5.8 11 6.5 0.1 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF4094) ABC_tran_CTD PF16326.5 gi|407465342|ref|YP_006776224.1| - 0.98 9.7 13.7 1.8 8.9 1.3 3.4 3 2 0 3 3 2 0 ABC transporter C-terminal domain Fez1 PF06818.15 gi|407465342|ref|YP_006776224.1| - 1.4 9.3 6.7 1.4 9.4 0.2 2.5 3 0 0 3 3 2 0 Fez1 COG2 PF06148.11 gi|407465342|ref|YP_006776224.1| - 1.6 8.8 6.8 6.6 6.8 1.0 2.9 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 FapA PF03961.13 gi|407465342|ref|YP_006776224.1| - 1.8 7.1 12.5 0.79 8.3 0.7 2.5 3 0 0 3 3 3 0 Flagellar Assembly Protein A Vps51 PF08700.11 gi|407465342|ref|YP_006776224.1| - 1.9 8.6 9.8 6.8 6.9 0.3 4.1 4 0 0 4 4 4 0 Vps51/Vps67 Uso1_p115_C PF04871.13 gi|407465342|ref|YP_006776224.1| - 2 8.8 16.0 0.26 11.6 1.8 2.7 3 0 0 3 3 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF724 PF05266.14 gi|407465342|ref|YP_006776224.1| - 2.7 7.8 9.7 2.1 8.1 0.4 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF724) Sec2p PF06428.11 gi|407465342|ref|YP_006776224.1| - 3.4 7.7 6.6 5.9 6.9 0.2 3.3 2 2 1 3 3 3 0 GDP/GTP exchange factor Sec2p MIP-T3_C PF17749.1 gi|407465342|ref|YP_006776224.1| - 3.8 7.5 15.3 0.94 9.4 0.2 4.2 4 1 1 5 5 4 0 Microtubule-binding protein MIP-T3 C-terminal region Csm1_N PF18504.1 gi|407465342|ref|YP_006776224.1| - 4 7.8 9.3 4.5 7.7 0.5 3.7 2 2 2 4 4 4 0 Csm1 N-terminal domain Prefoldin_2 PF01920.20 gi|407465342|ref|YP_006776224.1| - 4.7 7.2 16.4 1.7 8.6 0.1 4.1 4 1 1 5 5 4 0 Prefoldin subunit Spc24 PF08286.11 gi|407465342|ref|YP_006776224.1| - 7.9 6.8 13.8 6.4 7.1 1.0 3.4 3 2 0 3 3 3 0 Spc24 subunit of Ndc80 SlyX PF04102.12 gi|407465342|ref|YP_006776224.1| - 8.2 7.1 6.5 65 4.2 0.0 3.5 3 1 0 3 3 2 0 SlyX HTH_24 PF13412.6 gi|407465343|ref|YP_006776225.1| - 0.0012 18.3 0.9 0.0027 17.2 0.9 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 gi|407465343|ref|YP_006776225.1| - 0.0023 17.6 0.1 0.0052 16.4 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_5 PF01022.20 gi|407465343|ref|YP_006776225.1| - 0.022 14.6 0.1 0.052 13.4 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Na_H_Exchanger PF00999.21 gi|407465344|ref|YP_006776226.1| - 4.1e-54 183.8 53.4 5.1e-54 183.5 53.4 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CBS PF00571.28 gi|407465344|ref|YP_006776226.1| - 3.3e-12 46.6 0.6 8.8e-09 35.7 0.2 2.8 2 0 0 2 2 2 2 CBS domain TFIIE_alpha PF02002.17 gi|407465345|ref|YP_006776227.1| - 0.032 14.1 0.0 0.042 13.7 0.0 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit DUF2250 PF10007.9 gi|407465345|ref|YP_006776227.1| - 0.034 14.2 0.1 0.049 13.7 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) TrmB PF01978.19 gi|407465345|ref|YP_006776227.1| - 0.048 13.5 0.0 0.084 12.8 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 gi|407465345|ref|YP_006776227.1| - 0.059 13.2 0.0 0.096 12.5 0.0 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF4423 PF14394.6 gi|407465345|ref|YP_006776227.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_34 PF13601.6 gi|407465345|ref|YP_006776227.1| - 0.16 12.2 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain Band_7 PF01145.25 gi|407465346|ref|YP_006776228.1| - 7.6e-25 87.9 5.2 1.2e-24 87.3 5.2 1.3 1 1 0 1 1 1 1 SPFH domain / Band 7 family Bromo_TP_like PF17027.5 gi|407465347|ref|YP_006776229.1| - 0.0054 16.9 2.3 0.0075 16.4 2.3 1.2 1 0 0 1 1 1 1 Histone-fold protein Thioredoxin_3 PF13192.6 gi|407465347|ref|YP_006776229.1| - 0.05 13.6 0.0 0.07 13.2 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin domain Cupredoxin_1 PF13473.6 gi|407465348|ref|YP_006776230.1| - 9.2e-05 22.5 0.0 0.00015 21.8 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain Methyltransf_23 PF13489.6 gi|407465349|ref|YP_006776231.1| - 8.4e-08 32.2 0.0 1.4e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407465349|ref|YP_006776231.1| - 3.9e-07 30.7 0.0 6.7e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|407465349|ref|YP_006776231.1| - 1.7e-06 28.6 0.0 3.2e-06 27.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Trm112p PF03966.16 gi|407465349|ref|YP_006776231.1| - 3.3e-05 24.4 1.1 0.0012 19.4 0.9 2.7 2 1 0 2 2 2 1 Trm112p-like protein Methyltransf_12 PF08242.12 gi|407465349|ref|YP_006776231.1| - 0.0017 19.1 0.0 0.0033 18.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|407465349|ref|YP_006776231.1| - 0.01 15.4 0.0 0.02 14.4 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|407465349|ref|YP_006776231.1| - 0.016 15.0 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Elf1 PF05129.13 gi|407465349|ref|YP_006776231.1| - 0.03 14.4 0.1 0.06 13.4 0.1 1.5 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like NodS PF05401.11 gi|407465349|ref|YP_006776231.1| - 0.051 13.2 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Transglut_core2 PF13369.6 gi|407465350|ref|YP_006776232.1| - 2.9e-42 143.8 0.0 3.8e-42 143.5 0.0 1.1 1 0 0 1 1 1 1 Transglutaminase-like superfamily TPR_9 PF13371.6 gi|407465350|ref|YP_006776232.1| - 6.4e-16 58.3 0.0 9.5e-16 57.7 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 gi|407465350|ref|YP_006776232.1| - 0.00014 21.5 0.6 0.031 14.1 0.3 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|407465350|ref|YP_006776232.1| - 0.00035 20.6 0.3 0.087 12.9 0.0 2.8 1 1 1 2 2 2 2 Fis1 C-terminal tetratricopeptide repeat TPR_2 PF07719.17 gi|407465350|ref|YP_006776232.1| - 0.00056 19.8 0.1 0.048 13.8 0.1 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407465350|ref|YP_006776232.1| - 0.018 15.8 0.0 0.48 11.4 0.0 2.3 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407465350|ref|YP_006776232.1| - 0.057 13.7 0.3 0.27 11.6 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat DivIC PF04977.15 gi|407465351|ref|YP_006776233.1| - 0.0066 16.2 0.8 0.012 15.4 0.8 1.4 1 1 0 1 1 1 1 Septum formation initiator CCD48 PF15799.5 gi|407465351|ref|YP_006776233.1| - 0.025 12.9 0.1 0.025 12.9 0.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 DUF1192 PF06698.11 gi|407465351|ref|YP_006776233.1| - 0.076 13.1 1.8 0.13 12.3 1.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1192) zf-RING_4 PF14570.6 gi|407465352|ref|YP_006776234.1| - 0.02 14.7 1.4 3.8 7.4 0.1 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Elf1 PF05129.13 gi|407465352|ref|YP_006776234.1| - 0.08 13.0 2.1 0.12 12.4 2.1 1.3 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like PhnA_Zn_Ribbon PF08274.12 gi|407465352|ref|YP_006776234.1| - 0.15 12.0 2.3 3.7 7.6 0.3 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon DUF4451 PF14616.6 gi|407465352|ref|YP_006776234.1| - 0.18 12.0 1.6 0.33 11.2 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4451) Metallophos PF00149.28 gi|407465353|ref|YP_006776235.1| - 9.5e-19 68.7 0.4 1.4e-18 68.1 0.4 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|407465353|ref|YP_006776235.1| - 3.7e-16 59.7 0.1 5.4e-16 59.2 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|407465353|ref|YP_006776235.1| - 3.3e-06 26.6 0.2 0.00015 21.2 0.0 2.1 1 1 0 2 2 2 1 Metallophosphoesterase, calcineurin superfamily DUF2124 PF09897.9 gi|407465353|ref|YP_006776235.1| - 0.0024 17.8 0.0 0.004 17.1 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) DUF1951 PF09188.10 gi|407465353|ref|YP_006776235.1| - 0.022 14.7 0.3 0.05 13.6 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1951) PhoD PF09423.10 gi|407465353|ref|YP_006776235.1| - 0.098 11.7 0.1 2.2 7.2 0.1 2.4 2 1 0 2 2 2 0 PhoD-like phosphatase Iso_dh PF00180.20 gi|407465354|ref|YP_006776236.1| - 4.1e-80 269.5 0.4 4.8e-80 269.3 0.4 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Methyltransf_31 PF13847.6 gi|407465355|ref|YP_006776237.1| - 1.8e-07 31.1 0.3 3.1e-07 30.3 0.3 1.4 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|407465355|ref|YP_006776237.1| - 2.4e-07 30.5 0.0 7.1e-07 28.9 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|407465355|ref|YP_006776237.1| - 1.2e-06 28.5 0.0 4.2e-06 26.7 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|407465355|ref|YP_006776237.1| - 4e-05 24.2 0.1 6.4e-05 23.5 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407465355|ref|YP_006776237.1| - 0.00043 20.9 0.0 0.00089 19.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.12 gi|407465355|ref|YP_006776237.1| - 0.0013 17.9 0.0 0.002 17.3 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_32 PF13679.6 gi|407465355|ref|YP_006776237.1| - 0.0021 18.1 0.0 0.0033 17.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|407465355|ref|YP_006776237.1| - 0.0023 18.6 0.2 0.0038 17.9 0.2 1.5 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|407465355|ref|YP_006776237.1| - 0.0026 17.5 0.0 0.019 14.7 0.0 1.9 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 gi|407465355|ref|YP_006776237.1| - 0.085 11.9 0.1 3.7 6.5 0.0 2.2 1 1 1 2 2 2 0 Ribosomal RNA adenine dimethylase RrnaAD PF00398.20 gi|407465356|ref|YP_006776238.1| - 6.8e-39 133.5 2.3 1e-38 133.0 2.3 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.6 gi|407465356|ref|YP_006776238.1| - 7.5e-07 29.1 1.1 1.1e-05 25.2 1.1 2.1 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|407465356|ref|YP_006776238.1| - 6.5e-06 26.1 0.3 1.7e-05 24.7 0.0 1.8 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|407465356|ref|YP_006776238.1| - 1.7e-05 25.5 0.0 3.8e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|407465356|ref|YP_006776238.1| - 0.00081 19.3 0.8 0.0016 18.4 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 gi|407465356|ref|YP_006776238.1| - 0.0029 17.0 0.0 0.0047 16.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_12 PF08242.12 gi|407465356|ref|YP_006776238.1| - 0.0034 18.1 0.0 0.0099 16.6 0.0 1.9 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|407465356|ref|YP_006776238.1| - 0.0035 18.0 0.0 0.0062 17.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|407465356|ref|YP_006776238.1| - 0.0056 16.7 0.3 0.0097 15.9 0.0 1.7 2 1 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|407465356|ref|YP_006776238.1| - 0.0099 15.4 0.0 0.016 14.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain FUR PF01475.19 gi|407465356|ref|YP_006776238.1| - 0.06 13.5 0.1 0.98 9.6 0.0 2.4 2 0 0 2 2 2 0 Ferric uptake regulator family Methyltransf_23 PF13489.6 gi|407465356|ref|YP_006776238.1| - 0.083 12.7 0.0 0.11 12.4 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain YtzH PF14165.6 gi|407465356|ref|YP_006776238.1| - 0.088 13.2 0.1 0.18 12.2 0.1 1.5 1 0 0 1 1 1 0 YtzH-like protein DUF655 PF04919.12 gi|407465357|ref|YP_006776239.1| - 4.1e-48 163.7 0.3 4.6e-48 163.6 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|407465357|ref|YP_006776239.1| - 4.7e-05 23.6 0.1 0.00016 21.9 0.0 2.0 2 1 0 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|407465357|ref|YP_006776239.1| - 0.0049 17.1 0.0 0.03 14.6 0.0 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif RNA_pol_Rpb4 PF03874.16 gi|407465358|ref|YP_006776240.1| - 1.3e-07 32.0 2.1 2.9e-07 30.9 2.1 1.6 1 1 0 1 1 1 1 RNA polymerase Rpb4 DUF4844 PF16133.5 gi|407465358|ref|YP_006776240.1| - 0.0042 17.6 0.6 0.0071 16.9 0.6 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4844) Ribosomal_L21e PF01157.18 gi|407465359|ref|YP_006776241.1| - 1.9e-19 69.4 1.8 2.5e-19 69.0 1.8 1.1 1 0 0 1 1 1 1 Ribosomal protein L21e Radical_SAM PF04055.21 gi|407465360|ref|YP_006776242.1| - 2.3e-18 67.1 0.1 8.6e-18 65.3 0.1 1.9 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|407465360|ref|YP_006776242.1| - 0.00036 20.6 0.0 0.00077 19.6 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Rad51 PF08423.11 gi|407465361|ref|YP_006776243.1| - 1.6e-88 296.2 0.0 2.2e-88 295.8 0.0 1.2 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|407465361|ref|YP_006776243.1| - 9.3e-10 39.0 0.1 3.4e-09 37.2 0.1 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain RecA PF00154.21 gi|407465361|ref|YP_006776243.1| - 1.2e-09 38.1 0.1 1.8e-09 37.4 0.1 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein ATPase PF06745.13 gi|407465361|ref|YP_006776243.1| - 2.5e-08 33.6 0.1 5.9e-08 32.4 0.1 1.7 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|407465361|ref|YP_006776243.1| - 2e-06 27.5 0.0 4.5e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|407465361|ref|YP_006776243.1| - 0.0038 17.0 0.0 0.009 15.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|407465361|ref|YP_006776243.1| - 0.0067 17.0 0.3 0.03 14.8 0.0 2.1 2 0 0 2 2 2 1 ABC transporter NACHT PF05729.12 gi|407465361|ref|YP_006776243.1| - 0.16 11.9 0.1 0.61 10.0 0.0 2.0 3 0 0 3 3 3 0 NACHT domain Ribosomal_S30 PF04758.14 gi|407465362|ref|YP_006776244.1| - 8e-10 38.8 4.9 1.8e-09 37.6 4.9 1.6 1 1 0 1 1 1 1 Ribosomal protein S30 Radical_SAM PF04055.21 gi|407465363|ref|YP_006776245.1| - 4.5e-09 36.9 0.0 8.7e-09 36.0 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily NAD_binding_1 PF00175.21 gi|407465364|ref|YP_006776246.1| - 1.5e-10 41.7 0.0 4.2e-10 40.2 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.9 gi|407465364|ref|YP_006776246.1| - 2.6e-08 33.5 8.4 2.6e-08 33.5 8.4 1.7 2 0 0 2 2 2 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SH3_17 PF18350.1 gi|407465364|ref|YP_006776246.1| - 0.08 12.8 0.0 0.24 11.3 0.0 1.8 1 0 0 1 1 1 0 Restriction endonuclease SH3 domain FAD_binding_6 PF00970.24 gi|407465364|ref|YP_006776246.1| - 0.087 13.2 0.0 0.16 12.3 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 gi|407465364|ref|YP_006776246.1| - 0.24 11.5 0.7 18 5.4 0.0 2.5 2 1 1 3 3 3 0 Ferric reductase NAD binding domain DHO_dh PF01180.21 gi|407465365|ref|YP_006776247.1| - 7e-56 189.6 1.3 8e-56 189.4 1.3 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|407465365|ref|YP_006776247.1| - 9.6e-10 38.0 0.4 1.7e-06 27.4 0.2 2.0 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|407465365|ref|YP_006776247.1| - 1.7e-06 27.6 0.2 0.002 17.6 0.0 2.5 3 0 0 3 3 3 2 Histidine biosynthesis protein NMO PF03060.15 gi|407465365|ref|YP_006776247.1| - 2.3e-06 27.2 0.5 0.0011 18.5 0.0 2.2 1 1 1 2 2 2 2 Nitronate monooxygenase G3P_antiterm PF04309.12 gi|407465365|ref|YP_006776247.1| - 0.0001 21.8 1.4 0.38 10.2 0.0 2.5 3 0 0 3 3 3 2 Glycerol-3-phosphate responsive antiterminator DUF561 PF04481.12 gi|407465365|ref|YP_006776247.1| - 0.00022 20.5 11.6 0.0013 17.9 0.0 3.5 3 1 0 4 4 4 2 Protein of unknown function (DUF561) ThiG PF05690.14 gi|407465365|ref|YP_006776247.1| - 0.00023 20.6 3.2 0.11 11.7 1.0 2.7 2 1 1 3 3 3 2 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 gi|407465365|ref|YP_006776247.1| - 0.0012 17.9 0.4 0.0049 15.9 0.0 1.9 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Trp_syntA PF00290.20 gi|407465365|ref|YP_006776247.1| - 0.065 12.1 0.3 5.3 5.8 0.1 2.2 2 0 0 2 2 2 0 Tryptophan synthase alpha chain Nop PF01798.18 gi|407465366|ref|YP_006776248.1| - 4.2e-65 219.4 0.0 6.8e-65 218.8 0.0 1.3 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin AAA_15 PF13175.6 gi|407465368|ref|YP_006776250.1| - 6e-25 88.7 11.3 6e-25 88.7 11.3 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 gi|407465368|ref|YP_006776250.1| - 8e-14 52.1 7.6 4.8e-12 46.3 7.6 2.8 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF2813 PF11398.8 gi|407465368|ref|YP_006776250.1| - 0.00088 18.6 0.0 0.67 9.2 0.0 2.9 3 0 0 3 3 3 2 Protein of unknown function (DUF2813) ABC_tran PF00005.27 gi|407465368|ref|YP_006776250.1| - 0.0024 18.4 3.8 0.0029 18.1 1.0 2.6 2 1 0 2 2 2 1 ABC transporter AAA_27 PF13514.6 gi|407465368|ref|YP_006776250.1| - 0.004 16.8 0.0 0.032 13.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|407465368|ref|YP_006776250.1| - 0.012 15.4 0.4 0.039 13.7 0.0 2.0 2 0 0 2 2 2 0 P-loop containing region of AAA domain SMC_N PF02463.19 gi|407465368|ref|YP_006776250.1| - 0.081 12.3 0.0 2.1 7.7 0.0 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain MG2 PF01835.19 gi|407465369|ref|YP_006776251.1| - 2.8e-24 85.4 0.3 3.2e-06 27.5 0.0 6.5 7 0 0 7 7 7 3 MG2 domain FlgD_ig PF13860.6 gi|407465369|ref|YP_006776251.1| - 3.7e-08 33.1 3.9 0.52 10.2 0.0 6.4 7 0 0 7 7 7 2 FlgD Ig-like domain Big_6 PF17936.1 gi|407465369|ref|YP_006776251.1| - 0.00063 20.0 3.9 0.4 11.0 0.0 5.6 6 2 0 6 6 6 1 Bacterial Ig domain A2M_BRD PF07703.14 gi|407465369|ref|YP_006776251.1| - 0.025 14.9 6.1 1.6 9.0 0.0 3.8 3 2 0 3 3 3 0 Alpha-2-macroglobulin bait region domain SpaA PF17802.1 gi|407465369|ref|YP_006776251.1| - 0.053 13.9 10.7 0.31 11.4 0.3 4.8 5 2 0 5 5 5 0 Prealbumin-like fold domain I-set PF07679.16 gi|407465369|ref|YP_006776251.1| - 0.1 12.7 0.1 4.1 7.5 0.0 3.3 3 0 0 3 3 3 0 Immunoglobulin I-set domain MucBP PF06458.12 gi|407465369|ref|YP_006776251.1| - 6 7.9 7.0 1.3e+02 3.6 0.0 4.1 4 0 0 4 4 4 0 MucBP domain Pribosyltran PF00156.27 gi|407465370|ref|YP_006776252.1| - 9.5e-18 64.2 0.0 1.1e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|407465370|ref|YP_006776252.1| - 0.015 14.8 0.0 0.018 14.5 0.0 1.1 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase PNP_UDP_1 PF01048.20 gi|407465371|ref|YP_006776253.1| - 4.1e-45 153.9 0.0 4.6e-45 153.7 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Hyphal_reg_CWP PF11765.8 gi|407465372|ref|YP_006776254.1| - 0.11 11.4 0.1 0.12 11.3 0.1 1.1 1 0 0 1 1 1 0 Hyphally regulated cell wall protein N-terminal MRF_C2 PF13888.6 gi|407465373|ref|YP_006776255.1| - 0.0043 16.9 0.0 0.0055 16.6 0.0 1.3 1 0 0 1 1 1 1 Myelin gene regulatory factor C-terminal domain 2 TrmB PF01978.19 gi|407465374|ref|YP_006776256.1| - 0.00077 19.3 0.0 0.0011 18.8 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Sigma70_r4_2 PF08281.12 gi|407465374|ref|YP_006776256.1| - 0.022 14.4 0.1 0.038 13.7 0.1 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Holin_9 PF16936.5 gi|407465375|ref|YP_006776257.1| - 0.014 15.6 3.7 0.016 15.3 3.7 1.1 1 0 0 1 1 1 0 Putative holin CreD PF06123.12 gi|407465375|ref|YP_006776257.1| - 0.16 10.7 3.9 0.18 10.6 3.9 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD zf-IS66 PF13005.7 gi|407465376|ref|YP_006776258.1| - 0.1 13.0 8.4 0.33 11.4 1.1 2.3 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 P2X_receptor PF00864.19 gi|407465376|ref|YP_006776258.1| - 1.3 8.0 4.5 1.3 8.1 4.5 1.0 1 0 0 1 1 1 0 ATP P2X receptor P-II PF00543.22 gi|407465377|ref|YP_006776259.1| - 1.7e-20 73.5 2.3 2e-20 73.3 2.3 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II CdAMP_rec PF06153.11 gi|407465377|ref|YP_006776259.1| - 0.0089 16.2 0.3 0.12 12.6 0.1 2.2 2 1 0 2 2 2 1 Cyclic-di-AMP receptor Smr PF01713.21 gi|407465377|ref|YP_006776259.1| - 0.02 15.2 0.0 0.027 14.8 0.0 1.4 1 0 0 1 1 1 0 Smr domain Usp PF00582.26 gi|407465378|ref|YP_006776260.1| - 2.6e-32 112.3 0.0 3e-32 112.0 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Virul_fac_BrkB PF03631.15 gi|407465379|ref|YP_006776261.1| - 0.002 17.8 0.1 0.0026 17.4 0.1 1.1 1 0 0 1 1 1 1 Virulence factor BrkB Claudin_2 PF13903.6 gi|407465379|ref|YP_006776261.1| - 0.0049 16.6 0.4 0.0057 16.4 0.4 1.1 1 0 0 1 1 1 1 PMP-22/EMP/MP20/Claudin tight junction SSF PF00474.17 gi|407465380|ref|YP_006776262.1| - 3.2e-25 88.8 42.8 3.2e-25 88.8 42.8 1.8 2 0 0 2 2 2 1 Sodium:solute symporter family Amidohydro_1 PF01979.20 gi|407465381|ref|YP_006776263.1| - 3.6e-75 253.4 0.4 5.1e-75 252.9 0.4 1.2 1 0 0 1 1 1 1 Amidohydrolase family Urease_alpha PF00449.20 gi|407465381|ref|YP_006776263.1| - 1.3e-50 170.7 4.5 2.8e-50 169.7 4.5 1.6 1 0 0 1 1 1 1 Urease alpha-subunit, N-terminal domain Amidohydro_3 PF07969.11 gi|407465381|ref|YP_006776263.1| - 8.3e-08 32.1 1.4 1.8e-05 24.4 0.1 2.7 1 1 2 3 3 3 2 Amidohydrolase family Urease_beta PF00699.20 gi|407465382|ref|YP_006776264.1| - 4.1e-41 139.0 0.0 4.9e-41 138.7 0.0 1.1 1 0 0 1 1 1 1 Urease beta subunit Urease_gamma PF00547.18 gi|407465383|ref|YP_006776265.1| - 2.3e-43 146.5 0.0 2.5e-43 146.4 0.0 1.0 1 0 0 1 1 1 1 Urease, gamma subunit UreE_N PF02814.15 gi|407465384|ref|YP_006776266.1| - 1.4e-08 34.2 0.2 3.2e-08 33.1 0.1 1.6 2 0 0 2 2 2 1 UreE urease accessory protein, N-terminal domain UreE_C PF05194.12 gi|407465384|ref|YP_006776266.1| - 9.5e-06 26.0 0.1 1.4e-05 25.5 0.1 1.2 1 0 0 1 1 1 1 UreE urease accessory protein, C-terminal domain Vint PF14623.6 gi|407465384|ref|YP_006776266.1| - 0.056 13.3 0.0 0.074 12.9 0.0 1.1 1 0 0 1 1 1 0 Hint-domain UreF PF01730.16 gi|407465385|ref|YP_006776267.1| - 2.6e-21 76.6 0.0 3.1e-21 76.3 0.0 1.1 1 0 0 1 1 1 1 UreF DUF1507 PF07408.11 gi|407465385|ref|YP_006776267.1| - 0.024 14.5 0.1 0.25 11.3 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1507) cobW PF02492.19 gi|407465386|ref|YP_006776268.1| - 9.1e-33 113.3 0.0 1.1e-32 113.0 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|407465386|ref|YP_006776268.1| - 4.2e-09 35.8 0.9 2e-08 33.6 0.9 1.8 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 gi|407465386|ref|YP_006776268.1| - 2.3e-05 24.3 0.0 8.7e-05 22.4 0.0 2.0 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 gi|407465386|ref|YP_006776268.1| - 0.0048 17.4 0.0 0.0087 16.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|407465386|ref|YP_006776268.1| - 0.0065 16.4 0.0 0.01 15.7 0.0 1.5 1 0 0 1 1 1 1 NTPase Mg_chelatase PF01078.21 gi|407465386|ref|YP_006776268.1| - 0.015 14.7 0.0 0.025 13.9 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI GTP_EFTU PF00009.27 gi|407465386|ref|YP_006776268.1| - 0.017 14.7 0.7 1.8 8.1 0.0 2.7 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|407465386|ref|YP_006776268.1| - 0.038 13.9 0.4 5.8 6.8 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase AAA_22 PF13401.6 gi|407465386|ref|YP_006776268.1| - 0.05 13.9 0.0 0.094 13.0 0.0 1.5 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 gi|407465386|ref|YP_006776268.1| - 0.056 13.2 0.1 0.18 11.6 0.0 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein KTI12 PF08433.10 gi|407465386|ref|YP_006776268.1| - 0.057 12.9 0.0 0.089 12.2 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 ABC_tran PF00005.27 gi|407465386|ref|YP_006776268.1| - 0.11 13.1 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_30 PF13604.6 gi|407465386|ref|YP_006776268.1| - 0.15 11.8 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|407465386|ref|YP_006776268.1| - 0.17 12.0 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain UreD PF01774.17 gi|407465387|ref|YP_006776269.1| - 2.9e-41 141.7 0.0 3.5e-41 141.5 0.0 1.1 1 0 0 1 1 1 1 UreD urease accessory protein NicO PF03824.16 gi|407465388|ref|YP_006776270.1| - 1.1e-07 31.6 14.7 2.2e-07 30.5 14.7 1.5 1 1 0 1 1 1 1 High-affinity nickel-transport protein DsbD_2 PF13386.6 gi|407465388|ref|YP_006776270.1| - 1.2e-07 31.9 5.5 6.7e-07 29.4 1.6 2.1 1 1 1 2 2 2 1 Cytochrome C biogenesis protein transmembrane region 7tm_7 PF08395.12 gi|407465388|ref|YP_006776270.1| - 0.00099 18.4 0.0 0.0013 18.0 0.0 1.1 1 0 0 1 1 1 1 7tm Chemosensory receptor YtpI PF14007.6 gi|407465388|ref|YP_006776270.1| - 0.011 15.8 1.3 0.011 15.8 1.3 2.4 3 0 0 3 3 3 0 YtpI-like protein DUF4818 PF16089.5 gi|407465388|ref|YP_006776270.1| - 0.036 14.5 0.0 0.85 10.1 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4818) Halogen_Hydrol PF10112.9 gi|407465388|ref|YP_006776270.1| - 0.17 11.9 0.1 0.17 11.9 0.1 2.1 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein SSF PF00474.17 gi|407465391|ref|YP_006776273.1| - 3.2e-27 95.4 39.7 4.3e-27 95.0 39.7 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family Usp PF00582.26 gi|407465391|ref|YP_006776273.1| - 1.5e-17 64.4 0.0 6.1e-17 62.4 0.0 1.9 2 0 0 2 2 2 1 Universal stress protein family HTH_24 PF13412.6 gi|407465392|ref|YP_006776274.1| - 0.035 13.7 1.4 0.9 9.2 0.1 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DYW_deaminase PF14432.6 gi|407465392|ref|YP_006776274.1| - 0.069 13.0 0.0 2.2 8.2 0.0 2.1 2 0 0 2 2 2 0 DYW family of nucleic acid deaminases Nuc_N PF14448.6 gi|407465392|ref|YP_006776274.1| - 0.096 12.6 0.3 0.17 11.8 0.3 1.3 1 0 0 1 1 1 0 Nuclease N terminal DUF501 PF04417.12 gi|407465392|ref|YP_006776274.1| - 0.1 12.4 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF501) HTH_AsnC-type PF13404.6 gi|407465392|ref|YP_006776274.1| - 0.19 11.6 0.1 4.6 7.2 0.0 2.1 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain ParBc PF02195.18 gi|407465393|ref|YP_006776275.1| - 5.3e-18 65.1 0.3 1.4e-17 63.7 0.0 1.8 2 0 0 2 2 2 1 ParB-like nuclease domain KorB PF08535.10 gi|407465393|ref|YP_006776275.1| - 0.0017 18.3 0.1 0.0078 16.2 0.1 2.2 1 1 1 2 2 2 1 KorB domain CSN5_C PF18323.1 gi|407465393|ref|YP_006776275.1| - 0.042 14.7 1.4 6.8 7.7 0.0 3.0 2 1 1 3 3 3 0 Cop9 signalosome subunit 5 C-terminal domain Phage_holin_1 PF04531.13 gi|407465395|ref|YP_006776277.1| - 1.1 9.9 7.3 0.87 10.2 0.3 2.4 3 0 0 3 3 3 0 Bacteriophage holin Virul_fac_BrkB PF03631.15 gi|407465395|ref|YP_006776277.1| - 1.1 8.8 5.3 9.7 5.7 0.1 2.0 1 1 1 2 2 2 0 Virulence factor BrkB Cu-oxidase_3 PF07732.15 gi|407465396|ref|YP_006776278.1| - 8.1e-27 93.6 5.5 2.4e-24 85.6 0.4 3.3 3 0 0 3 3 3 2 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|407465396|ref|YP_006776278.1| - 8.1e-16 58.0 7.8 3.5e-05 23.6 1.2 3.5 3 0 0 3 3 3 3 Multicopper oxidase Cupredoxin_1 PF13473.6 gi|407465396|ref|YP_006776278.1| - 4.9e-11 42.7 0.1 1.8e-05 24.8 0.0 3.5 3 0 0 3 3 3 2 Cupredoxin-like domain Copper-bind PF00127.20 gi|407465396|ref|YP_006776278.1| - 8.7e-08 32.5 7.5 0.00012 22.4 0.1 4.0 3 2 0 3 3 3 2 Copper binding proteins, plastocyanin/azurin family Calici_PP_N PF08405.11 gi|407465397|ref|YP_006776279.1| - 0.036 12.9 0.0 0.04 12.7 0.0 1.1 1 0 0 1 1 1 0 Viral polyprotein N-terminal DUF4131 PF13567.6 gi|407465397|ref|YP_006776279.1| - 0.043 13.5 0.0 0.05 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF1129 PF06570.11 gi|407465397|ref|YP_006776279.1| - 0.06 12.8 0.5 0.082 12.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) TMEM208_SND2 PF05620.11 gi|407465397|ref|YP_006776279.1| - 0.065 13.0 0.1 0.084 12.6 0.1 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 RseC_MucC PF04246.12 gi|407465397|ref|YP_006776279.1| - 0.067 13.1 0.2 0.095 12.6 0.2 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC TP6A_N PF04406.14 gi|407465398|ref|YP_006776280.1| - 3.3e-14 52.6 0.0 5.5e-14 51.9 0.0 1.4 1 0 0 1 1 1 1 Type IIB DNA topoisomerase Toprim PF01751.22 gi|407465398|ref|YP_006776280.1| - 0.038 14.2 0.4 0.077 13.2 0.0 1.8 2 0 0 2 2 2 0 Toprim domain SPATA48 PF15073.6 gi|407465398|ref|YP_006776280.1| - 0.15 12.3 0.0 0.58 10.5 0.0 2.0 2 1 0 2 2 2 0 Spermatogenesis-associated protein 48 Topo-VIb_trans PF09239.11 gi|407465399|ref|YP_006776281.1| - 2.8e-56 189.7 0.0 5.5e-56 188.8 0.0 1.5 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.26 gi|407465399|ref|YP_006776281.1| - 1e-08 35.7 0.0 2.4e-08 34.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|407465399|ref|YP_006776281.1| - 2.9e-05 23.9 0.0 5.7e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KH_1 PF00013.29 gi|407465400|ref|YP_006776282.1| - 6.9e-11 41.8 6.5 5.7e-05 22.9 0.9 2.4 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 gi|407465400|ref|YP_006776282.1| - 0.38 10.6 5.0 5.7 6.8 0.5 2.5 2 0 0 2 2 2 0 KH domain RIO1 PF01163.22 gi|407465401|ref|YP_006776283.1| - 3.3e-53 180.1 0.0 4.6e-53 179.6 0.0 1.1 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|407465401|ref|YP_006776283.1| - 0.0047 16.9 0.0 1.4 8.8 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 gi|407465401|ref|YP_006776283.1| - 0.0087 14.9 0.1 0.012 14.4 0.1 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 gi|407465401|ref|YP_006776283.1| - 0.016 14.5 0.0 0.24 10.7 0.0 2.0 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF424 PF04242.13 gi|407465402|ref|YP_006776284.1| - 4.7e-21 74.8 0.3 5.6e-21 74.6 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) eIF-5_eIF-2B PF01873.17 gi|407465403|ref|YP_006776285.1| - 4e-29 100.9 0.0 5e-29 100.5 0.0 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Lar_restr_allev PF14354.6 gi|407465403|ref|YP_006776285.1| - 0.0018 18.6 0.3 0.0025 18.2 0.3 1.3 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 gi|407465403|ref|YP_006776285.1| - 0.0026 17.2 0.6 0.0053 16.2 0.6 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding Elf1 PF05129.13 gi|407465403|ref|YP_006776285.1| - 0.013 15.5 0.2 0.024 14.7 0.2 1.5 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like PDCD2_C PF04194.13 gi|407465403|ref|YP_006776285.1| - 0.083 13.0 0.0 0.12 12.4 0.0 1.3 1 1 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain DUF295 PF03478.18 gi|407465403|ref|YP_006776285.1| - 0.14 11.8 0.0 0.42 10.2 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF295) zf-TFIIB PF13453.6 gi|407465403|ref|YP_006776285.1| - 0.15 11.4 1.6 0.26 10.7 1.6 1.4 1 0 0 1 1 1 0 Transcription factor zinc-finger DZR PF12773.7 gi|407465404|ref|YP_006776286.1| - 0.029 14.4 2.2 0.047 13.7 2.2 1.4 1 1 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 gi|407465404|ref|YP_006776286.1| - 0.038 14.0 0.5 0.039 14.0 0.5 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Auto_anti-p27 PF06677.12 gi|407465404|ref|YP_006776286.1| - 0.13 12.4 3.3 1.5 9.1 0.1 2.2 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) GFA PF04828.14 gi|407465404|ref|YP_006776286.1| - 0.15 12.4 0.1 0.15 12.4 0.1 1.8 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_4 PF13717.6 gi|407465404|ref|YP_006776286.1| - 0.44 10.5 5.7 2.4 8.1 5.7 1.9 1 1 0 1 1 1 0 zinc-ribbon domain THOC7 PF05615.13 gi|407465405|ref|YP_006776287.1| - 0.022 15.0 2.3 0.022 15.0 2.3 1.4 1 1 0 1 1 1 0 Tho complex subunit 7 MRP-S26 PF14943.6 gi|407465405|ref|YP_006776287.1| - 0.14 12.0 6.3 0.29 11.0 3.2 2.1 1 1 0 2 2 2 0 Mitochondrial ribosome subunit S26 AI-2E_transport PF01594.16 gi|407465405|ref|YP_006776287.1| - 0.15 11.2 1.2 0.19 10.8 0.6 1.4 1 1 0 1 1 1 0 AI-2E family transporter DUF373 PF04123.13 gi|407465406|ref|YP_006776288.1| - 3.2e-92 309.6 8.8 3.7e-92 309.3 8.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) DUF4984 PF16372.5 gi|407465406|ref|YP_006776288.1| - 0.027 14.4 0.1 0.044 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4984) SPC12 PF06645.13 gi|407465406|ref|YP_006776288.1| - 2 8.6 4.5 0.63 10.2 0.5 2.2 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF4229 PF14012.6 gi|407465406|ref|YP_006776288.1| - 5.6 7.1 8.0 25 5.1 0.1 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF4229) Prenyltransf PF01255.19 gi|407465407|ref|YP_006776289.1| - 1.7e-70 237.0 0.0 1.9e-70 236.9 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Amidohydro_1 PF01979.20 gi|407465407|ref|YP_006776289.1| - 0.18 11.1 0.0 0.22 10.8 0.0 1.1 1 0 0 1 1 1 0 Amidohydrolase family NUDIX PF00293.28 gi|407465408|ref|YP_006776290.1| - 1.3e-21 77.0 0.3 1.5e-21 76.8 0.3 1.0 1 0 0 1 1 1 1 NUDIX domain OMPdecase PF00215.24 gi|407465409|ref|YP_006776291.1| - 4.1e-25 88.7 0.0 4.9e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Endothelin PF00322.17 gi|407465410|ref|YP_006776292.1| - 0.085 12.5 0.2 2.2 8.0 0.1 2.4 2 0 0 2 2 2 0 Endothelin family Adenylsucc_synt PF00709.21 gi|407465411|ref|YP_006776293.1| - 5.3e-84 282.6 1.2 8.4e-41 140.3 0.0 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase Annexin PF00191.20 gi|407465412|ref|YP_006776294.1| - 0.016 15.3 0.1 0.037 14.1 0.0 1.6 2 0 0 2 2 2 0 Annexin Iron_traffic PF04362.14 gi|407465413|ref|YP_006776295.1| - 3.1e-07 30.0 0.1 3.9e-07 29.7 0.1 1.2 1 0 0 1 1 1 1 Bacterial Fe(2+) trafficking OSTMP1 PF09777.9 gi|407465413|ref|YP_006776295.1| - 0.032 13.6 0.1 0.035 13.5 0.1 1.0 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor zf_UBZ PF18439.1 gi|407465413|ref|YP_006776295.1| - 0.22 11.1 2.1 0.55 9.9 0.2 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger HypA PF01155.19 gi|407465414|ref|YP_006776296.1| - 0.11 12.5 0.3 0.13 12.3 0.3 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_4 PF13717.6 gi|407465414|ref|YP_006776296.1| - 0.15 12.0 6.2 2.3 8.2 6.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_S27e PF01667.17 gi|407465414|ref|YP_006776296.1| - 0.16 11.7 4.0 0.37 10.5 4.0 1.5 1 1 0 1 1 1 0 Ribosomal protein S27 DUF4014 PF13198.6 gi|407465415|ref|YP_006776297.1| - 0.22 12.0 0.3 0.22 12.0 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4014) HTH_45 PF14947.6 gi|407465416|ref|YP_006776298.1| - 1.1e-11 44.5 0.3 1.5e-11 44.1 0.3 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|407465416|ref|YP_006776298.1| - 3.3e-07 30.1 0.0 4.3e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 MarR family DUF4364 PF14277.6 gi|407465416|ref|YP_006776298.1| - 0.00041 20.1 0.1 0.00046 20.0 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) MarR PF01047.22 gi|407465416|ref|YP_006776298.1| - 0.00048 20.0 0.0 0.00064 19.6 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|407465416|ref|YP_006776298.1| - 0.00073 19.4 0.0 0.00099 18.9 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|407465416|ref|YP_006776298.1| - 0.00086 19.7 0.1 0.0011 19.4 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain Mrr_N PF14338.6 gi|407465416|ref|YP_006776298.1| - 0.001 19.1 0.0 0.0013 18.8 0.0 1.3 1 0 0 1 1 1 1 Mrr N-terminal domain HTH_24 PF13412.6 gi|407465416|ref|YP_006776298.1| - 0.0021 17.6 0.1 0.004 16.7 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF1495 PF07381.11 gi|407465416|ref|YP_006776298.1| - 0.0035 17.1 0.0 0.0053 16.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_IclR PF09339.10 gi|407465416|ref|YP_006776298.1| - 0.004 16.9 0.0 0.0057 16.4 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain RQC PF09382.10 gi|407465416|ref|YP_006776298.1| - 0.0042 16.8 0.0 0.006 16.4 0.0 1.2 1 0 0 1 1 1 1 RQC domain Dimerisation2 PF16864.5 gi|407465416|ref|YP_006776298.1| - 0.0078 16.2 0.0 0.01 15.8 0.0 1.2 1 0 0 1 1 1 1 Dimerisation domain PadR PF03551.14 gi|407465416|ref|YP_006776298.1| - 0.012 15.6 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DUF2250 PF10007.9 gi|407465416|ref|YP_006776298.1| - 0.017 15.2 0.1 0.032 14.3 0.1 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) RP-C PF03428.13 gi|407465416|ref|YP_006776298.1| - 0.024 14.3 0.0 0.026 14.2 0.0 1.1 1 0 0 1 1 1 0 Replication protein C N-terminal domain RNA_pol_Rpc34 PF05158.12 gi|407465416|ref|YP_006776298.1| - 0.029 13.8 0.1 0.029 13.8 0.1 1.0 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit HTH_34 PF13601.6 gi|407465416|ref|YP_006776298.1| - 0.033 14.4 0.1 0.051 13.8 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|407465416|ref|YP_006776298.1| - 0.034 14.0 0.1 0.049 13.5 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family RPA_C PF08784.11 gi|407465416|ref|YP_006776298.1| - 0.034 14.8 0.0 0.047 14.4 0.0 1.2 1 0 0 1 1 1 0 Replication protein A C terminal Rrf2 PF02082.20 gi|407465416|ref|YP_006776298.1| - 0.061 13.7 0.0 0.076 13.4 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator Linker_histone PF00538.19 gi|407465416|ref|YP_006776298.1| - 0.07 13.5 0.1 0.11 12.8 0.1 1.5 1 1 0 1 1 1 0 linker histone H1 and H5 family Rio2_N PF09202.11 gi|407465416|ref|YP_006776298.1| - 0.073 13.3 0.1 0.083 13.1 0.1 1.1 1 0 0 1 1 1 0 Rio2, N-terminal FtsK_gamma PF09397.10 gi|407465416|ref|YP_006776298.1| - 0.075 12.8 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Ftsk gamma domain HxlR PF01638.17 gi|407465416|ref|YP_006776298.1| - 0.084 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix FeoC PF09012.10 gi|407465416|ref|YP_006776298.1| - 0.087 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 FeoC like transcriptional regulator Cdc6_C PF09079.11 gi|407465416|ref|YP_006776298.1| - 0.11 12.5 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain HTH_20 PF12840.7 gi|407465416|ref|YP_006776298.1| - 0.13 12.4 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DUF505 PF04458.12 gi|407465416|ref|YP_006776298.1| - 0.16 10.3 0.0 0.16 10.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Sua5_yciO_yrdC PF01300.18 gi|407465417|ref|YP_006776299.1| - 9.8e-49 165.3 0.0 1.1e-48 165.1 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination SPACA9 PF15120.6 gi|407465417|ref|YP_006776299.1| - 0.01 15.6 0.2 0.023 14.5 0.1 1.7 1 1 0 2 2 2 0 Sperm acrosome-associated protein 9 DUF5543 PF17697.1 gi|407465417|ref|YP_006776299.1| - 0.14 12.5 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5543) THUMP PF02926.17 gi|407465418|ref|YP_006776300.1| - 1.1e-15 58.0 3.4 1.2e-15 57.8 3.4 1.1 1 0 0 1 1 1 1 THUMP domain ThiS PF02597.20 gi|407465419|ref|YP_006776301.1| - 9.3e-11 42.2 0.0 5.3e-10 39.8 0.0 2.2 2 0 0 2 2 2 1 ThiS family CGI-121 PF08617.10 gi|407465419|ref|YP_006776301.1| - 1e-06 29.0 3.0 1.9e-06 28.1 2.9 1.6 1 1 0 1 1 1 1 Kinase binding protein CGI-121 Urm1 PF09138.11 gi|407465419|ref|YP_006776301.1| - 0.00016 22.0 0.6 0.0006 20.1 0.1 2.3 2 1 0 2 2 2 1 Urm1 (Ubiquitin related modifier) Ribosomal_S17e PF00833.18 gi|407465420|ref|YP_006776302.1| - 5.6e-18 65.0 2.2 6.6e-18 64.8 2.2 1.1 1 0 0 1 1 1 1 Ribosomal S17 DUF5524 PF17662.1 gi|407465420|ref|YP_006776302.1| - 0.032 13.6 0.5 0.033 13.6 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5524) TatD_DNase PF01026.21 gi|407465421|ref|YP_006776303.1| - 4.9e-44 150.6 0.0 5.5e-44 150.5 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase CBFD_NFYB_HMF PF00808.23 gi|407465422|ref|YP_006776304.1| - 3e-12 46.6 0.5 3.6e-12 46.4 0.5 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-S PF15630.6 gi|407465422|ref|YP_006776304.1| - 0.00013 22.3 0.0 0.00016 22.0 0.0 1.2 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 gi|407465422|ref|YP_006776304.1| - 0.00063 19.8 0.1 0.00073 19.6 0.1 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold Histone PF00125.24 gi|407465422|ref|YP_006776304.1| - 0.0014 19.0 0.4 0.0018 18.7 0.4 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 gi|407465422|ref|YP_006776304.1| - 0.0025 17.8 0.0 0.003 17.6 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 gi|407465422|ref|YP_006776304.1| - 0.0042 17.5 0.1 0.0047 17.4 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 gi|407465422|ref|YP_006776304.1| - 0.013 15.5 0.0 0.014 15.4 0.0 1.1 1 0 0 1 1 1 0 Bromodomain associated Copper-bind PF00127.20 gi|407465423|ref|YP_006776305.1| - 2.1e-07 31.3 0.1 1.4e-06 28.6 0.1 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|407465423|ref|YP_006776305.1| - 2.7e-07 30.7 0.0 5.7e-07 29.6 0.0 1.6 1 1 0 1 1 1 1 Cupredoxin-like domain AIPR PF10592.9 gi|407465424|ref|YP_006776306.1| - 1.3e-61 208.9 7.9 1.3e-61 208.9 7.9 2.2 2 0 0 2 2 2 1 AIPR protein ZZ PF00569.17 gi|407465425|ref|YP_006776307.1| - 0.005 16.6 1.6 0.028 14.2 1.6 1.9 1 1 0 1 1 1 1 Zinc finger, ZZ type DUF4428 PF14471.6 gi|407465425|ref|YP_006776307.1| - 0.038 13.9 2.5 0.06 13.3 2.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) FAM221 PF14753.6 gi|407465426|ref|YP_006776308.1| - 0.0004 20.0 2.3 0.00056 19.5 2.3 1.2 1 0 0 1 1 1 1 Protein FAM221A/B HTH_45 PF14947.6 gi|407465427|ref|YP_006776309.1| - 2.3e-14 53.1 0.2 2.7e-14 52.9 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.6 gi|407465427|ref|YP_006776309.1| - 0.00085 19.4 0.1 0.0011 19.1 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|407465427|ref|YP_006776309.1| - 0.0025 17.6 0.1 0.0027 17.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Rrf2 PF02082.20 gi|407465427|ref|YP_006776309.1| - 0.004 17.5 0.0 0.0097 16.2 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulator RNA_pol_Rpc34 PF05158.12 gi|407465427|ref|YP_006776309.1| - 0.0045 16.4 0.0 0.0056 16.1 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit DUF505 PF04458.12 gi|407465427|ref|YP_006776309.1| - 0.028 12.8 0.0 0.028 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) TrmB PF01978.19 gi|407465427|ref|YP_006776309.1| - 0.035 14.0 0.0 0.049 13.5 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Mrr_N PF14338.6 gi|407465427|ref|YP_006776309.1| - 0.071 13.2 0.0 0.098 12.8 0.0 1.4 1 1 0 1 1 1 0 Mrr N-terminal domain RPA_C PF08784.11 gi|407465427|ref|YP_006776309.1| - 0.091 13.4 0.0 0.13 12.9 0.0 1.2 1 0 0 1 1 1 0 Replication protein A C terminal Ribosomal_S19e PF01090.19 gi|407465427|ref|YP_006776309.1| - 0.094 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S19e MarR PF01047.22 gi|407465427|ref|YP_006776309.1| - 0.097 12.6 0.2 0.18 11.8 0.1 1.4 2 0 0 2 2 2 0 MarR family HTH_5 PF01022.20 gi|407465427|ref|YP_006776309.1| - 0.14 12.0 0.1 0.27 11.1 0.1 1.5 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family EI24 PF07264.11 gi|407465428|ref|YP_006776310.1| - 0.01 16.1 0.1 0.011 16.0 0.1 1.0 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) DUF4229 PF14012.6 gi|407465428|ref|YP_006776310.1| - 0.013 15.6 0.0 0.017 15.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) Polysacc_synt PF01943.17 gi|407465428|ref|YP_006776310.1| - 0.038 13.4 0.0 0.044 13.2 0.0 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein LapA_dom PF06305.11 gi|407465428|ref|YP_006776310.1| - 0.07 12.9 0.6 0.29 11.0 0.0 1.9 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain FeoB_associated PF12669.7 gi|407465428|ref|YP_006776310.1| - 0.66 10.4 0.2 0.66 10.4 0.2 1.9 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein Phage_integr_3 PF16795.5 gi|407465430|ref|YP_006776312.1| - 2e-11 44.1 0.2 3.4e-11 43.3 0.2 1.3 1 0 0 1 1 1 1 Archaeal phage integrase RHH_8 PF17723.1 gi|407465432|ref|YP_006776314.1| - 0.00051 20.2 0.3 0.0018 18.5 0.3 2.0 1 0 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family Z1 PF10593.9 gi|407465432|ref|YP_006776314.1| - 0.13 11.8 3.9 0.041 13.4 0.8 1.7 2 0 0 2 2 2 0 Z1 domain PIN PF01850.21 gi|407465433|ref|YP_006776315.1| - 6.1e-06 26.7 0.0 7.5e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|407465433|ref|YP_006776315.1| - 5e-05 23.9 1.0 0.00053 20.5 1.4 1.9 1 1 1 2 2 2 2 PIN domain PIN_4 PF13638.6 gi|407465433|ref|YP_006776315.1| - 0.01 16.1 0.1 0.016 15.5 0.1 1.5 1 1 0 1 1 1 0 PIN domain RNase_H_2 PF13482.6 gi|407465434|ref|YP_006776316.1| - 2.3e-05 24.4 0.0 5.3e-05 23.3 0.0 1.7 1 1 0 1 1 1 1 RNase_H superfamily RNase_T PF00929.24 gi|407465434|ref|YP_006776316.1| - 0.12 12.9 0.7 0.31 11.6 0.2 1.8 2 0 0 2 2 2 0 Exonuclease VRR_NUC PF08774.11 gi|407465435|ref|YP_006776317.1| - 0.0011 18.9 0.0 0.002 18.2 0.0 1.4 1 0 0 1 1 1 1 VRR-NUC domain Endonuc_Holl PF10107.9 gi|407465435|ref|YP_006776317.1| - 0.0036 17.2 0.3 0.005 16.7 0.3 1.2 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase PAS_12 PF18095.1 gi|407465438|ref|YP_006776320.1| - 0.055 13.1 1.5 0.12 12.0 1.5 1.5 1 0 0 1 1 1 0 UPF0242 C-terminal PAS-like domain FlaC_arch PF05377.11 gi|407465438|ref|YP_006776320.1| - 0.51 10.8 5.0 0.52 10.7 1.5 2.6 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Ribosomal_S20p PF01649.18 gi|407465438|ref|YP_006776320.1| - 1.8 9.2 6.8 20 5.9 3.1 2.3 2 0 0 2 2 2 0 Ribosomal protein S20 DNA_methylase PF00145.17 gi|407465440|ref|YP_006776322.1| - 5.3e-92 308.7 0.0 6.6e-92 308.4 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase GramPos_pilinD3 PF16570.5 gi|407465440|ref|YP_006776322.1| - 0.05 14.3 0.1 0.088 13.5 0.1 1.4 1 0 0 1 1 1 0 Gram-positive pilin backbone subunit 3, Cna-B-like domain Vsr PF03852.15 gi|407465441|ref|YP_006776323.1| - 1.2e-19 70.0 0.2 1.2e-19 70.0 0.2 1.7 2 1 0 2 2 2 1 DNA mismatch endonuclease Vsr MTES_1575 PF18741.1 gi|407465441|ref|YP_006776323.1| - 1e-06 28.8 6.2 0.00047 20.3 3.8 2.9 1 1 1 2 2 2 1 REase_MTES_1575 DUF559 PF04480.12 gi|407465441|ref|YP_006776323.1| - 2.6e-06 27.3 1.0 0.00028 20.7 0.1 2.5 1 1 1 2 2 2 2 Protein of unknown function (DUF559) DYW_deaminase PF14432.6 gi|407465442|ref|YP_006776324.1| - 0.049 13.5 0.1 0.076 12.9 0.1 1.4 1 0 0 1 1 1 0 DYW family of nucleic acid deaminases Meth_synt_1 PF08267.12 gi|407465442|ref|YP_006776324.1| - 0.11 11.9 0.1 0.16 11.4 0.1 1.1 1 0 0 1 1 1 0 Cobalamin-independent synthase, N-terminal domain PGM_PMM_I PF02878.16 gi|407465443|ref|YP_006776325.1| - 9.4e-24 83.7 0.0 2.4e-23 82.4 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 gi|407465443|ref|YP_006776325.1| - 8.9e-16 58.1 0.0 1.7e-15 57.2 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 gi|407465443|ref|YP_006776325.1| - 9e-13 48.7 0.0 2.2e-12 47.5 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|407465443|ref|YP_006776325.1| - 9.7e-07 28.9 0.0 2.7e-06 27.5 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain AIRS PF00586.24 gi|407465444|ref|YP_006776326.1| - 9.8e-15 55.0 0.0 1.7e-14 54.3 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|407465444|ref|YP_006776326.1| - 0.00047 20.3 0.0 0.00076 19.6 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Ribosomal_S11 PF00411.19 gi|407465446|ref|YP_006776328.1| - 3.1e-42 143.4 1.9 5.1e-42 142.7 1.9 1.3 1 0 0 1 1 1 1 Ribosomal protein S11 CBM_25 PF03423.13 gi|407465446|ref|YP_006776328.1| - 0.01 16.1 0.1 0.02 15.1 0.1 1.5 1 0 0 1 1 1 1 Carbohydrate binding domain (family 25) dsDNA_bind PF01984.20 gi|407465448|ref|YP_006776330.1| - 0.023 15.0 0.3 0.028 14.7 0.3 1.1 1 0 0 1 1 1 0 Double-stranded DNA-binding domain RtcB PF01139.17 gi|407465449|ref|YP_006776331.1| - 1.4e-165 551.5 0.1 1.6e-165 551.3 0.1 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB DUF3492 PF11997.8 gi|407465449|ref|YP_006776331.1| - 0.19 11.5 0.1 0.3 10.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3492) MBF1 PF08523.10 gi|407465450|ref|YP_006776332.1| - 0.49 10.9 10.0 0.9 10.0 10.0 1.5 1 1 0 1 1 1 0 Multiprotein bridging factor 1 Borrelia_P83 PF05262.11 gi|407465450|ref|YP_006776332.1| - 4.8 5.6 13.5 4.8 5.6 13.5 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF4383 PF14325.6 gi|407465451|ref|YP_006776333.1| - 0.54 10.5 9.5 0.77 10.0 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4383) DUF2207 PF09972.9 gi|407465451|ref|YP_006776333.1| - 4.4 6.0 5.8 5.1 5.8 5.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Usp PF00582.26 gi|407465453|ref|YP_006776335.1| - 1.5e-30 106.5 0.0 1.7e-30 106.4 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF3173 PF11372.8 gi|407465453|ref|YP_006776335.1| - 0.041 13.7 0.0 0.16 11.8 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3173) CBS PF00571.28 gi|407465454|ref|YP_006776336.1| - 1e-24 86.7 8.3 1.7e-14 54.0 0.7 2.2 2 0 0 2 2 2 2 CBS domain Yip1 PF04893.17 gi|407465455|ref|YP_006776337.1| - 0.012 15.4 0.1 0.014 15.1 0.1 1.1 1 0 0 1 1 1 0 Yip1 domain Lyase_1 PF00206.20 gi|407465456|ref|YP_006776338.1| - 1.1e-48 166.2 2.6 1.5e-48 165.8 2.6 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|407465456|ref|YP_006776338.1| - 5.2e-15 55.8 0.0 1.3e-14 54.5 0.0 1.7 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.11 gi|407465456|ref|YP_006776338.1| - 0.025 14.7 0.0 0.076 13.1 0.0 1.8 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal Asn_synthase PF00733.21 gi|407465457|ref|YP_006776339.1| - 3.3e-25 89.5 0.0 2.7e-21 76.6 0.0 2.0 1 1 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.17 gi|407465457|ref|YP_006776339.1| - 1.9e-05 23.9 0.1 0.0001 21.5 0.1 2.0 2 0 0 2 2 2 1 NAD synthase QueC PF06508.13 gi|407465457|ref|YP_006776339.1| - 0.012 15.2 0.0 0.024 14.1 0.0 1.6 1 1 0 1 1 1 0 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|407465457|ref|YP_006776339.1| - 0.1 12.3 0.2 0.26 11.0 0.1 1.9 2 1 0 2 2 2 0 PP-loop family Pterin_4a PF01329.19 gi|407465458|ref|YP_006776340.1| - 6.8e-32 109.5 0.1 7.3e-32 109.4 0.1 1.0 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase IF-2 PF11987.8 gi|407465458|ref|YP_006776340.1| - 0.074 13.2 0.0 0.12 12.5 0.0 1.4 1 1 0 1 1 1 0 Translation-initiation factor 2 PTPS PF01242.19 gi|407465459|ref|YP_006776341.1| - 2.2e-19 69.6 0.5 1.3e-18 67.2 0.0 2.0 2 0 0 2 2 2 1 6-pyruvoyl tetrahydropterin synthase PriA_3primeBD PF17764.1 gi|407465459|ref|YP_006776341.1| - 0.083 12.8 0.2 1.6 8.7 0.1 2.4 2 0 0 2 2 2 0 3′ DNA-binding domain (3′BD) tRNA-synt_1 PF00133.22 gi|407465460|ref|YP_006776342.1| - 9.9e-108 360.9 1.1 9.8e-107 357.7 0.1 2.3 2 1 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|407465460|ref|YP_006776342.1| - 6.4e-30 104.1 7.1 7e-30 104.0 3.5 2.3 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|407465460|ref|YP_006776342.1| - 1.1e-21 77.1 2.1 1.5e-11 43.7 0.0 3.7 3 1 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|407465460|ref|YP_006776342.1| - 0.00077 19.0 0.5 0.1 12.1 0.0 2.9 2 1 1 3 3 3 2 Leucyl-tRNA synthetase, Domain 2 DUF1992 PF09350.10 gi|407465460|ref|YP_006776342.1| - 0.016 15.4 0.2 0.044 13.9 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1992) DUF2286 PF10051.9 gi|407465460|ref|YP_006776342.1| - 0.1 12.3 2.7 0.15 11.8 0.9 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2286) Spond_N PF06468.13 gi|407465462|ref|YP_006776344.1| - 3.1e-06 27.4 0.0 4.9e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Spondin_N HTH_5 PF01022.20 gi|407465464|ref|YP_006776346.1| - 4.3e-05 23.3 0.2 0.00012 21.9 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|407465464|ref|YP_006776346.1| - 0.00027 20.9 2.9 0.00039 20.3 2.9 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix Phage_rep_org_N PF09681.10 gi|407465464|ref|YP_006776346.1| - 0.017 15.0 0.5 0.02 14.8 0.5 1.1 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) TrmB PF01978.19 gi|407465464|ref|YP_006776346.1| - 0.035 14.0 0.1 0.06 13.2 0.1 1.4 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|407465464|ref|YP_006776346.1| - 0.035 14.1 0.6 0.071 13.1 0.0 1.8 2 0 0 2 2 2 0 HTH domain DUF3781 PF12636.7 gi|407465464|ref|YP_006776346.1| - 0.045 13.6 1.3 0.063 13.2 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) HTH_20 PF12840.7 gi|407465464|ref|YP_006776346.1| - 0.084 13.0 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DM13 PF10517.9 gi|407465465|ref|YP_006776347.1| - 2.6e-20 72.9 0.0 3.6e-20 72.5 0.0 1.2 1 0 0 1 1 1 1 Electron transfer DM13 ING PF12998.7 gi|407465468|ref|YP_006776350.1| - 0.093 13.3 2.4 0.11 13.2 2.4 1.1 1 0 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding AsnC_trans_reg PF01037.21 gi|407465469|ref|YP_006776351.1| - 1.6e-06 28.0 0.0 1.9e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|407465469|ref|YP_006776351.1| - 0.034 14.2 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 NapD protein SCAPER_N PF16501.5 gi|407465469|ref|YP_006776351.1| - 0.068 13.2 0.0 0.073 13.1 0.0 1.1 1 0 0 1 1 1 0 S phase cyclin A-associated protein in the endoplasmic reticulum ATP-synt_ab_Xtn PF16886.5 gi|407465469|ref|YP_006776351.1| - 0.096 12.6 0.0 0.099 12.5 0.0 1.1 1 0 0 1 1 1 0 ATPsynthase alpha/beta subunit N-term extension Poty_PP PF08440.10 gi|407465469|ref|YP_006776351.1| - 0.097 11.7 0.1 0.11 11.6 0.1 1.0 1 0 0 1 1 1 0 Potyviridae polyprotein AsnC_trans_reg PF01037.21 gi|407465470|ref|YP_006776352.1| - 1.2e-19 70.1 0.0 4e-11 42.7 0.0 2.2 2 0 0 2 2 2 2 Lrp/AsnC ligand binding domain AsnC_trans_reg PF01037.21 gi|407465472|ref|YP_006776354.1| - 1.1e-16 60.6 0.1 1.7e-16 59.9 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|407465472|ref|YP_006776354.1| - 6.2e-10 38.5 2.4 2.6e-09 36.5 2.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|407465472|ref|YP_006776354.1| - 8.1e-10 38.4 2.3 1.4e-09 37.6 2.3 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|407465472|ref|YP_006776354.1| - 0.00013 21.8 1.2 0.00034 20.5 1.2 1.7 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.7 gi|407465472|ref|YP_006776354.1| - 0.0012 18.8 0.0 0.0023 18.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|407465472|ref|YP_006776354.1| - 0.0016 18.9 0.2 0.0042 17.6 0.2 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain Mga PF05043.13 gi|407465472|ref|YP_006776354.1| - 0.014 15.9 0.1 0.033 14.8 0.1 1.6 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_50 PF18024.1 gi|407465472|ref|YP_006776354.1| - 0.045 13.4 0.0 0.11 12.1 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_34 PF13601.6 gi|407465472|ref|YP_006776354.1| - 0.048 13.8 0.3 0.11 12.7 0.1 1.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_10 PF04967.12 gi|407465472|ref|YP_006776354.1| - 0.23 11.3 1.2 0.32 10.8 0.3 1.7 2 0 0 2 2 2 0 HTH DNA binding domain Clavanin PF05452.11 gi|407465473|ref|YP_006776355.1| - 0.035 14.3 0.7 0.048 13.9 0.7 1.2 1 0 0 1 1 1 0 Clavanin Nucleocap_ssRNA PF11128.8 gi|407465473|ref|YP_006776355.1| - 0.06 13.1 0.1 0.073 12.8 0.1 1.0 1 0 0 1 1 1 0 Plant viral coat protein nucleocapsid AsnC_trans_reg PF01037.21 gi|407465476|ref|YP_006776358.1| - 1.2e-11 44.4 0.0 1.6e-11 44.0 0.0 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|407465476|ref|YP_006776358.1| - 2.2e-05 24.4 0.1 4.4e-05 23.5 0.1 1.5 1 1 1 2 2 2 1 NapD protein Pro_dh PF01619.18 gi|407465477|ref|YP_006776359.1| - 1.9e-29 103.2 0.3 2.8e-29 102.6 0.3 1.2 1 0 0 1 1 1 1 Proline dehydrogenase SAS4 PF15460.6 gi|407465477|ref|YP_006776359.1| - 0.03 14.4 0.0 0.12 12.5 0.0 2.0 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 KMP11 PF03037.16 gi|407465477|ref|YP_006776359.1| - 0.38 11.6 0.1 0.38 11.6 0.1 2.3 2 0 0 2 2 2 0 Kinetoplastid membrane protein 11 Aldedh PF00171.22 gi|407465478|ref|YP_006776360.1| - 3.2e-139 464.4 0.1 4.3e-139 464.0 0.1 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Arginase PF00491.21 gi|407465479|ref|YP_006776361.1| - 3.1e-62 210.6 0.0 3.8e-62 210.3 0.0 1.0 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.7 gi|407465479|ref|YP_006776361.1| - 0.03 14.5 0.0 0.087 13.0 0.0 1.7 1 1 1 2 2 2 0 UPF0489 domain PTase_Orf2 PF11468.8 gi|407465479|ref|YP_006776361.1| - 0.18 11.2 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 Aromatic prenyltransferase Orf2 Whib PF02467.16 gi|407465480|ref|YP_006776362.1| - 0.011 16.3 0.1 0.024 15.2 0.0 1.5 2 0 0 2 2 2 0 Transcription factor WhiB SNO PF01174.19 gi|407465482|ref|YP_006776364.1| - 6.8e-50 169.5 0.2 7.8e-50 169.3 0.2 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|407465482|ref|YP_006776364.1| - 1.3e-13 51.0 0.0 1.8e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|407465482|ref|YP_006776364.1| - 1.4e-13 51.0 0.0 2e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|407465482|ref|YP_006776364.1| - 4.1e-05 23.5 0.1 7.9e-05 22.5 0.1 1.5 1 0 0 1 1 1 1 DJ-1/PfpI family Peptidase_S51 PF03575.17 gi|407465482|ref|YP_006776364.1| - 0.00011 21.9 0.1 0.00019 21.1 0.1 1.3 1 0 0 1 1 1 1 Peptidase family S51 Peptidase_C26 PF07722.13 gi|407465482|ref|YP_006776364.1| - 0.0003 20.6 0.1 0.0095 15.7 0.0 2.4 2 1 0 2 2 2 1 Peptidase C26 BPL_N PF09825.9 gi|407465482|ref|YP_006776364.1| - 0.003 16.7 0.0 1.1 8.3 0.0 2.2 2 0 0 2 2 2 2 Biotin-protein ligase, N terminal SOR_SNZ PF01680.17 gi|407465483|ref|YP_006776365.1| - 3.5e-95 317.7 4.7 3.5e-95 317.7 4.7 1.4 2 0 0 2 2 2 1 SOR/SNZ family ThiG PF05690.14 gi|407465483|ref|YP_006776365.1| - 3.8e-07 29.7 2.3 4.4e-05 22.9 0.1 2.4 2 1 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|407465483|ref|YP_006776365.1| - 0.0002 20.9 2.2 0.14 11.5 0.0 2.3 2 0 0 2 2 2 2 Nitronate monooxygenase His_biosynth PF00977.21 gi|407465483|ref|YP_006776365.1| - 0.00076 19.0 1.1 0.056 12.9 0.1 3.1 2 2 0 2 2 2 1 Histidine biosynthesis protein IGPS PF00218.21 gi|407465483|ref|YP_006776365.1| - 0.0013 17.9 0.0 0.031 13.5 0.0 2.3 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase Dus PF01207.17 gi|407465483|ref|YP_006776365.1| - 0.0013 17.8 0.5 1 8.4 0.1 2.3 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) OMPdecase PF00215.24 gi|407465483|ref|YP_006776365.1| - 0.0079 15.8 0.4 0.7 9.4 0.0 2.5 2 1 1 3 3 3 1 Orotidine 5'-phosphate decarboxylase / HUMPS family NanE PF04131.14 gi|407465483|ref|YP_006776365.1| - 0.057 12.6 2.5 0.7 9.0 0.0 2.9 2 2 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Peptidase_S66C PF17676.1 gi|407465483|ref|YP_006776365.1| - 0.086 13.4 0.0 0.34 11.4 0.0 2.1 2 1 0 2 2 2 0 LD-carboxypeptidase C-terminal domain Aconitase PF00330.20 gi|407465485|ref|YP_006776367.1| - 9e-145 483.2 0.0 1.2e-144 482.7 0.0 1.2 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|407465485|ref|YP_006776367.1| - 8.7e-37 126.4 0.1 6.8e-36 123.5 0.0 2.2 2 0 0 2 2 2 1 Aconitase C-terminal domain DUF521 PF04412.13 gi|407465485|ref|YP_006776367.1| - 0.029 13.1 0.0 0.048 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) Cas_Cmr5 PF09701.10 gi|407465486|ref|YP_006776368.1| - 0.019 15.2 0.0 0.047 14.0 0.0 1.6 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr5) F-box-like_2 PF13013.6 gi|407465486|ref|YP_006776368.1| - 0.083 12.9 0.2 1.5 8.9 0.2 2.1 1 1 0 1 1 1 0 F-box-like domain DUF4932 PF16286.5 gi|407465487|ref|YP_006776369.1| - 0.017 14.5 0.3 0.025 13.9 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4932) AsnC_trans_reg PF01037.21 gi|407465488|ref|YP_006776370.1| - 5.3e-11 42.3 0.0 6.2e-11 42.1 0.0 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|407465488|ref|YP_006776370.1| - 0.00066 19.7 0.0 0.00077 19.5 0.0 1.1 1 0 0 1 1 1 1 NapD protein EVE PF01878.18 gi|407465489|ref|YP_006776371.1| - 4.3e-40 137.1 0.5 4.9e-40 136.9 0.5 1.0 1 0 0 1 1 1 1 EVE domain HP1451_C PF18472.1 gi|407465489|ref|YP_006776371.1| - 0.011 15.7 0.1 0.024 14.6 0.0 1.6 2 0 0 2 2 2 0 HP1451 C-terminal domain ATG11 PF10377.9 gi|407465489|ref|YP_006776371.1| - 0.098 12.7 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Autophagy-related protein 11 DUF1175 PF06672.11 gi|407465489|ref|YP_006776371.1| - 0.13 12.0 0.1 0.34 10.6 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1175) tRNA_synthFbeta PF17759.1 gi|407465490|ref|YP_006776372.1| - 7.8e-38 130.1 0.0 4e-37 127.7 0.0 1.9 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|407465490|ref|YP_006776372.1| - 5.4e-19 68.3 0.0 7.4e-13 48.6 0.0 3.0 3 0 0 3 3 3 2 tRNA synthetase B5 domain B3_4 PF03483.17 gi|407465490|ref|YP_006776372.1| - 5.6e-12 45.7 0.2 9.3e-12 45.0 0.2 1.3 1 0 0 1 1 1 1 B3/4 domain tRNA-synt_2d PF01409.20 gi|407465490|ref|YP_006776372.1| - 0.0016 18.0 0.0 0.003 17.1 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2d PF01409.20 gi|407465491|ref|YP_006776373.1| - 4e-84 281.9 0.1 5.1e-84 281.6 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|407465491|ref|YP_006776373.1| - 3.3e-06 26.7 0.0 2.4e-05 23.9 0.0 2.0 1 1 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2b PF00587.25 gi|407465491|ref|YP_006776373.1| - 0.0014 18.7 0.0 0.0078 16.2 0.0 2.1 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 gi|407465491|ref|YP_006776373.1| - 0.019 14.1 0.4 0.048 12.7 0.0 1.8 3 0 0 3 3 3 0 tRNA synthetases class II (D, K and N) tRNA-synt_1b PF00579.25 gi|407465492|ref|YP_006776374.1| - 2.6e-30 105.8 0.0 4.3e-30 105.0 0.0 1.3 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.18 gi|407465492|ref|YP_006776374.1| - 0.0074 15.2 0.1 0.13 11.2 0.0 2.3 1 1 1 2 2 2 1 tRNA synthetases class I (K) GshA PF08886.11 gi|407465493|ref|YP_006776375.1| - 0.028 13.0 0.6 0.032 12.8 0.6 1.0 1 0 0 1 1 1 0 Glutamate-cysteine ligase FEZ PF07763.13 gi|407465493|ref|YP_006776375.1| - 0.072 12.8 4.4 0.12 12.1 4.3 1.4 1 1 0 1 1 1 0 FEZ-like protein Prim_Zn_Ribbon PF08273.12 gi|407465494|ref|YP_006776376.1| - 0.071 13.4 0.5 0.071 13.4 0.5 2.2 3 0 0 3 3 3 0 Zinc-binding domain of primase-helicase zf-CCHC_4 PF14392.6 gi|407465494|ref|YP_006776376.1| - 0.33 10.7 3.8 5 7.0 0.1 2.2 2 0 0 2 2 2 0 Zinc knuckle CTP_transf_like PF01467.26 gi|407465496|ref|YP_006776378.1| - 1.4e-14 54.5 0.0 1.6e-14 54.3 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|407465496|ref|YP_006776378.1| - 0.04 13.8 0.0 0.085 12.7 0.0 1.6 2 0 0 2 2 2 0 FAD synthetase Glycos_transf_1 PF00534.20 gi|407465497|ref|YP_006776379.1| - 0.047 13.2 0.1 11 5.6 0.0 2.9 2 1 1 3 3 3 0 Glycosyl transferases group 1 MG2 PF01835.19 gi|407465497|ref|YP_006776379.1| - 0.11 13.0 0.1 0.24 11.9 0.1 1.6 1 1 0 1 1 1 0 MG2 domain V_ATPase_I_N PF18670.1 gi|407465497|ref|YP_006776379.1| - 0.22 11.9 0.0 92 3.5 0.0 3.0 3 0 0 3 3 3 0 V-type ATPase subunit I, N-terminal domain AhpC-TSA PF00578.21 gi|407465499|ref|YP_006776381.1| - 9.6e-22 77.2 0.1 1.2e-21 76.9 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|407465499|ref|YP_006776381.1| - 2e-15 56.8 0.1 2.5e-15 56.4 0.1 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 gi|407465499|ref|YP_006776381.1| - 3.9e-05 23.9 0.1 6.2e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|407465499|ref|YP_006776381.1| - 0.0021 18.5 0.5 0.0038 17.7 0.5 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 gi|407465499|ref|YP_006776381.1| - 0.03 14.4 0.4 1 9.4 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin domain HTH_24 PF13412.6 gi|407465500|ref|YP_006776382.1| - 9.6e-05 21.9 1.4 0.00036 20.0 0.1 2.4 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding B12-binding_2 PF02607.17 gi|407465500|ref|YP_006776382.1| - 0.00081 19.8 0.0 0.0019 18.6 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain HTH_23 PF13384.6 gi|407465500|ref|YP_006776382.1| - 0.001 18.8 0.0 0.0028 17.4 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Crp_2 PF13545.6 gi|407465500|ref|YP_006776382.1| - 0.011 15.7 0.0 0.044 13.8 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain FaeA PF04703.12 gi|407465500|ref|YP_006776382.1| - 0.016 15.6 0.0 0.03 14.7 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein HTH_11 PF08279.12 gi|407465500|ref|YP_006776382.1| - 0.022 14.7 0.0 0.057 13.4 0.0 1.7 1 0 0 1 1 1 0 HTH domain HTH_IclR PF09339.10 gi|407465500|ref|YP_006776382.1| - 0.027 14.3 0.0 0.065 13.0 0.0 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_29 PF13551.6 gi|407465500|ref|YP_006776382.1| - 0.084 12.9 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix ICAT PF06384.11 gi|407465500|ref|YP_006776382.1| - 0.087 13.1 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 Beta-catenin-interacting protein ICAT Lectin_like PF18560.1 gi|407465501|ref|YP_006776383.1| - 0.021 15.0 0.1 0.026 14.7 0.1 1.1 1 0 0 1 1 1 0 Lectin like domain PI3K_P85_iSH2 PF16454.5 gi|407465501|ref|YP_006776383.1| - 0.048 13.3 0.2 0.06 12.9 0.2 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain LOH1CR12 PF10158.9 gi|407465501|ref|YP_006776383.1| - 0.089 12.8 0.2 0.64 10.0 0.2 2.0 1 1 1 2 2 2 0 Tumour suppressor protein MethyltransfD12 PF02086.15 gi|407465502|ref|YP_006776384.1| - 1.4e-64 218.3 1.3 1.6e-64 218.1 1.3 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase DUF2089 PF09862.9 gi|407465502|ref|YP_006776384.1| - 0.0019 18.2 0.2 0.0046 17.0 0.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2089) EF-hand_14 PF17959.1 gi|407465502|ref|YP_006776384.1| - 0.013 15.8 0.1 0.029 14.7 0.1 1.6 1 0 0 1 1 1 0 EF-hand domain Cons_hypoth95 PF03602.15 gi|407465502|ref|YP_006776384.1| - 0.019 14.6 0.0 0.17 11.5 0.0 2.3 3 0 0 3 3 3 0 Conserved hypothetical protein 95 Archaeal_AmoA PF12942.7 gi|407465503|ref|YP_006776385.1| - 2.4e-91 304.4 12.5 2.8e-91 304.2 12.5 1.0 1 0 0 1 1 1 1 Archaeal ammonia monooxygenase subunit A (AmoA) SecG PF03840.14 gi|407465504|ref|YP_006776386.1| - 7.9 6.6 9.2 2.4 8.3 1.5 2.2 2 0 0 2 2 2 0 Preprotein translocase SecG subunit AmoC PF04896.12 gi|407465505|ref|YP_006776387.1| - 1.6e-13 50.5 6.2 2e-13 50.2 6.2 1.1 1 0 0 1 1 1 1 Ammonia monooxygenase/methane monooxygenase, subunit C RTA1 PF04479.13 gi|407465505|ref|YP_006776387.1| - 0.0046 16.6 0.5 0.0067 16.1 0.5 1.2 1 0 0 1 1 1 1 RTA1 like protein Monooxygenase_B PF04744.12 gi|407465506|ref|YP_006776388.1| - 1.9e-08 33.6 0.0 5e-08 32.2 0.0 1.6 1 1 0 1 1 1 1 Monooxygenase subunit B protein FixQ PF05545.11 gi|407465509|ref|YP_006776391.1| - 0.029 14.3 1.5 0.047 13.7 1.5 1.5 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Clostridium_P47 PF06597.11 gi|407465509|ref|YP_006776391.1| - 0.15 10.7 0.0 0.18 10.5 0.0 1.0 1 0 0 1 1 1 0 Clostridium P-47 protein Ribosomal_S13_N PF08069.12 gi|407465511|ref|YP_006776393.1| - 1.2e-26 92.5 0.3 2e-26 91.8 0.3 1.4 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|407465511|ref|YP_006776393.1| - 3.9e-10 39.8 0.6 6.4e-10 39.1 0.6 1.3 1 0 0 1 1 1 1 Ribosomal protein S15 DHHA1 PF02272.19 gi|407465512|ref|YP_006776394.1| - 3e-12 47.1 0.0 7.9e-12 45.8 0.0 1.8 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|407465512|ref|YP_006776394.1| - 0.0037 17.5 0.3 0.014 15.6 0.1 2.0 2 0 0 2 2 2 1 DHH family Pcc1 PF09341.10 gi|407465513|ref|YP_006776395.1| - 2.6e-05 24.2 0.0 3.1e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF4854 PF16146.5 gi|407465513|ref|YP_006776395.1| - 0.0056 17.0 0.0 0.0078 16.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4854) Mor PF08765.11 gi|407465513|ref|YP_006776395.1| - 0.071 13.1 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Mor transcription activator family tRNA-synt_2b PF00587.25 gi|407465514|ref|YP_006776396.1| - 1.3e-36 126.3 0.3 2.5e-36 125.3 0.3 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|407465514|ref|YP_006776396.1| - 1e-24 86.8 8.9 1.9e-24 85.9 8.9 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain UPF0228 PF05727.11 gi|407465514|ref|YP_006776396.1| - 0.038 13.8 0.1 0.64 9.8 0.0 2.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0228) Baculo_PEP_C PF04513.12 gi|407465514|ref|YP_006776396.1| - 0.12 12.4 1.1 0.16 12.0 0.2 1.7 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Ribosomal_S3Ae PF01015.18 gi|407465515|ref|YP_006776397.1| - 3.5e-59 199.8 3.2 3.9e-59 199.6 3.2 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family RNA_binding PF01877.17 gi|407465516|ref|YP_006776398.1| - 9.6e-29 100.1 6.3 1.2e-28 99.8 6.3 1.1 1 0 0 1 1 1 1 RNA binding HD_3 PF13023.6 gi|407465516|ref|YP_006776398.1| - 0.0078 16.2 1.3 0.012 15.6 0.9 1.5 1 1 1 2 2 2 1 HD domain FAD_binding_2 PF00890.24 gi|407465517|ref|YP_006776399.1| - 2.9e-06 26.6 0.0 0.013 14.6 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|407465517|ref|YP_006776399.1| - 3.4e-05 23.4 0.0 6.1e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 gi|407465517|ref|YP_006776399.1| - 0.00023 20.9 0.1 0.58 9.7 0.1 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|407465517|ref|YP_006776399.1| - 0.00038 19.8 0.0 0.00082 18.7 0.0 1.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|407465517|ref|YP_006776399.1| - 0.0014 17.6 0.0 0.0044 15.9 0.0 1.8 2 0 0 2 2 2 1 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|407465517|ref|YP_006776399.1| - 0.0039 16.3 0.0 0.0061 15.7 0.0 1.4 1 1 0 1 1 1 1 Lycopene cyclase protein GDI PF00996.18 gi|407465517|ref|YP_006776399.1| - 0.0068 15.0 0.1 0.033 12.7 0.0 1.9 2 0 0 2 2 2 1 GDP dissociation inhibitor HI0933_like PF03486.14 gi|407465517|ref|YP_006776399.1| - 0.0082 14.9 0.0 0.36 9.5 0.0 2.2 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|407465517|ref|YP_006776399.1| - 0.025 13.8 0.0 0.25 10.5 0.0 2.5 3 0 0 3 3 3 0 Thi4 family NAD_binding_8 PF13450.6 gi|407465517|ref|YP_006776399.1| - 0.073 13.3 0.0 0.24 11.7 0.0 1.9 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|407465517|ref|YP_006776399.1| - 0.1 11.9 0.1 0.4 9.9 0.0 2.0 3 0 0 3 3 3 0 FAD binding domain TrkA_N PF02254.18 gi|407465517|ref|YP_006776399.1| - 0.17 12.1 0.0 0.45 10.8 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain AAA_5 PF07728.14 gi|407465518|ref|YP_006776400.1| - 4e-24 85.2 0.0 5.9e-24 84.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|407465518|ref|YP_006776400.1| - 5.9e-13 48.8 0.0 8.5e-13 48.3 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 gi|407465518|ref|YP_006776400.1| - 1.7e-07 31.7 0.0 3.1e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|407465518|ref|YP_006776400.1| - 3.2e-06 26.8 0.0 5.8e-06 25.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_14 PF13173.6 gi|407465518|ref|YP_006776400.1| - 1.6e-05 25.0 0.1 2.7e-05 24.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 gi|407465518|ref|YP_006776400.1| - 5.4e-05 23.0 0.0 9.5e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_16 PF13191.6 gi|407465518|ref|YP_006776400.1| - 0.00012 22.5 0.1 0.00023 21.6 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|407465518|ref|YP_006776400.1| - 0.00068 19.9 0.2 0.0024 18.1 0.0 1.9 1 1 1 2 2 2 1 AAA domain RuvB_N PF05496.12 gi|407465518|ref|YP_006776400.1| - 0.00072 19.3 0.3 0.023 14.4 0.2 2.5 2 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_6 PF12774.7 gi|407465518|ref|YP_006776400.1| - 0.0019 17.3 0.0 0.013 14.5 0.0 2.0 1 1 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region ATPase_2 PF01637.18 gi|407465518|ref|YP_006776400.1| - 0.0023 17.9 0.0 0.0033 17.4 0.0 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea Mg_chelatase PF01078.21 gi|407465518|ref|YP_006776400.1| - 0.0043 16.5 0.0 1 8.7 0.0 2.3 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 gi|407465518|ref|YP_006776400.1| - 0.0051 17.4 0.0 0.011 16.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|407465518|ref|YP_006776400.1| - 0.0054 16.5 0.0 0.0079 16.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain Sigma54_activ_2 PF14532.6 gi|407465518|ref|YP_006776400.1| - 0.0056 16.8 0.0 0.015 15.4 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_35 PF14516.6 gi|407465518|ref|YP_006776400.1| - 0.0066 15.3 0.0 0.011 14.6 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain CbbQ_C PF08406.10 gi|407465518|ref|YP_006776400.1| - 0.013 15.8 0.0 0.024 14.9 0.0 1.5 1 0 0 1 1 1 0 CbbQ/NirQ/NorQ C-terminal Roc PF08477.13 gi|407465518|ref|YP_006776400.1| - 0.013 15.7 0.1 0.025 14.8 0.1 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_29 PF13555.6 gi|407465518|ref|YP_006776400.1| - 0.013 15.2 0.0 0.025 14.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 gi|407465518|ref|YP_006776400.1| - 0.018 15.3 0.0 0.042 14.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 gi|407465518|ref|YP_006776400.1| - 0.019 14.4 0.1 0.05 13.0 0.0 1.7 2 0 0 2 2 2 0 Bacterial TniB protein AAA_24 PF13479.6 gi|407465518|ref|YP_006776400.1| - 0.029 14.1 0.1 0.047 13.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|407465518|ref|YP_006776400.1| - 0.032 14.7 0.1 0.094 13.2 0.1 1.6 1 1 0 1 1 1 0 ABC transporter TsaE PF02367.17 gi|407465518|ref|YP_006776400.1| - 0.033 14.2 0.0 0.065 13.2 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 gi|407465518|ref|YP_006776400.1| - 0.06 13.5 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|407465518|ref|YP_006776400.1| - 0.067 12.9 0.3 0.29 10.8 0.1 2.1 2 1 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|407465518|ref|YP_006776400.1| - 0.082 12.6 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase ATPase PF06745.13 gi|407465518|ref|YP_006776400.1| - 0.12 11.7 0.0 0.2 11.0 0.0 1.3 1 0 0 1 1 1 0 KaiC RNA12 PF10443.9 gi|407465518|ref|YP_006776400.1| - 0.12 11.1 0.0 0.19 10.4 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein Rad17 PF03215.15 gi|407465518|ref|YP_006776400.1| - 0.12 12.3 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain VWA PF00092.28 gi|407465519|ref|YP_006776401.1| - 3.8e-05 24.0 0.0 0.00021 21.6 0.0 2.2 2 0 0 2 2 2 1 von Willebrand factor type A domain MEIOC PF15189.6 gi|407465519|ref|YP_006776401.1| - 0.017 14.7 0.2 0.75 9.4 0.0 2.5 2 0 0 2 2 2 0 Meiosis-specific coiled-coil domain-containing protein MEIOC VWA_2 PF13519.6 gi|407465519|ref|YP_006776401.1| - 0.035 14.7 0.0 0.12 13.1 0.0 1.9 1 0 0 1 1 1 0 von Willebrand factor type A domain PALP PF00291.25 gi|407465520|ref|YP_006776402.1| - 3.4e-25 89.0 0.0 3.6e-23 82.4 0.0 3.0 2 1 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme DUF1189 PF06691.11 gi|407465520|ref|YP_006776402.1| - 0.11 12.1 0.2 0.2 11.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) ASCH PF04266.14 gi|407465521|ref|YP_006776403.1| - 3e-09 37.4 0.0 4.1e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 ASCH domain TBP PF00352.21 gi|407465522|ref|YP_006776404.1| - 6e-54 180.0 0.1 4.8e-27 93.7 0.1 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|407465522|ref|YP_006776404.1| - 2.7e-05 24.2 0.0 0.31 11.2 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NERD PF08378.11 gi|407465524|ref|YP_006776406.1| - 0.053 14.0 2.5 0.12 12.9 0.3 2.2 1 1 1 2 2 2 0 Nuclease-related domain DUF3244 PF11589.8 gi|407465525|ref|YP_006776407.1| - 0.00096 19.2 1.4 0.0023 18.0 1.3 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF3244) FlgD_ig PF13860.6 gi|407465525|ref|YP_006776407.1| - 0.038 13.9 3.4 0.12 12.3 3.4 2.0 1 1 0 1 1 1 0 FlgD Ig-like domain PPC PF04151.15 gi|407465525|ref|YP_006776407.1| - 1.6 9.9 7.9 12 7.1 7.8 2.2 1 1 0 1 1 1 0 Bacterial pre-peptidase C-terminal domain DUF968 PF06147.11 gi|407465526|ref|YP_006776408.1| - 0.088 13.0 0.4 0.1 12.8 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF968) HTH_10 PF04967.12 gi|407465527|ref|YP_006776409.1| - 0.015 15.1 0.0 0.024 14.4 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain P-II PF00543.22 gi|407465528|ref|YP_006776410.1| - 1.2e-11 45.1 3.0 1.4e-11 44.9 3.0 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II AsnC_trans_reg PF01037.21 gi|407465529|ref|YP_006776411.1| - 1.8e-12 47.0 0.0 2.1e-12 46.8 0.0 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|407465529|ref|YP_006776411.1| - 0.0015 18.6 0.1 0.0017 18.3 0.1 1.1 1 0 0 1 1 1 1 NapD protein Dus PF01207.17 gi|407465530|ref|YP_006776412.1| - 2.3e-71 240.4 0.0 2.8e-71 240.2 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) DHO_dh PF01180.21 gi|407465530|ref|YP_006776412.1| - 3.7e-06 26.4 0.1 0.00071 18.9 0.1 2.2 1 1 0 1 1 1 1 Dihydroorotate dehydrogenase Oxidored_FMN PF00724.20 gi|407465530|ref|YP_006776412.1| - 0.00038 19.8 0.0 0.00057 19.3 0.0 1.3 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family NanE PF04131.14 gi|407465530|ref|YP_006776412.1| - 0.0014 17.8 0.1 0.015 14.5 0.0 2.2 1 1 2 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 gi|407465530|ref|YP_006776412.1| - 0.011 15.2 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 Histidine biosynthesis protein NIR_SIR_ferr PF03460.17 gi|407465530|ref|YP_006776412.1| - 0.022 14.6 0.0 0.13 12.1 0.0 2.3 3 0 0 3 3 3 0 Nitrite/Sulfite reductase ferredoxin-like half domain MR_MLE_C PF13378.6 gi|407465530|ref|YP_006776412.1| - 0.022 14.3 0.0 0.053 13.1 0.0 1.6 1 1 1 2 2 2 0 Enolase C-terminal domain-like IMPDH PF00478.25 gi|407465530|ref|YP_006776412.1| - 0.058 12.4 0.0 0.083 11.9 0.0 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|407465530|ref|YP_006776412.1| - 0.085 11.9 0.0 0.14 11.2 0.0 1.3 1 0 0 1 1 1 0 FMN-dependent dehydrogenase TSP_3 PF02412.18 gi|407465531|ref|YP_006776413.1| - 5.7e-31 105.9 208.7 0.00032 20.3 0.5 27.2 29 4 1 30 30 30 18 Thrombospondin type 3 repeat MRP-S26 PF14943.6 gi|407465531|ref|YP_006776413.1| - 0.11 12.5 6.7 3.3 7.6 0.0 4.2 6 0 0 6 6 6 0 Mitochondrial ribosome subunit S26 DUF282 PF03380.14 gi|407465531|ref|YP_006776413.1| - 9.2 6.3 16.2 22 5.1 0.1 7.3 7 0 0 7 7 7 0 Caenorhabditis protein of unknown function, DUF282 TSP_3 PF02412.18 gi|407465532|ref|YP_006776414.1| - 4.6e-35 119.0 217.5 0.0004 20.0 0.4 27.1 28 6 3 31 31 31 17 Thrombospondin type 3 repeat MRP-S26 PF14943.6 gi|407465532|ref|YP_006776414.1| - 0.00045 20.2 2.4 18 5.2 0.0 4.8 6 0 0 6 6 6 3 Mitochondrial ribosome subunit S26 TSP_3 PF02412.18 gi|407465533|ref|YP_006776415.1| - 1.7e-46 155.6 251.8 0.0002 21.0 1.0 27.3 25 8 3 28 28 28 20 Thrombospondin type 3 repeat AKAP7_RIRII_bdg PF10470.9 gi|407465533|ref|YP_006776415.1| - 0.22 11.6 3.3 1.8e+02 2.3 0.1 5.6 6 0 0 6 6 6 0 PKA-RI-RII subunit binding domain of A-kinase anchor protein DUF282 PF03380.14 gi|407465533|ref|YP_006776415.1| - 0.38 10.7 31.7 8.7 6.4 0.1 11.0 13 0 0 13 13 13 0 Caenorhabditis protein of unknown function, DUF282 Wyosine_form PF08608.12 gi|407465534|ref|YP_006776416.1| - 1.1e-19 70.6 0.0 7.4e-19 67.9 0.0 2.3 2 0 0 2 2 2 1 Wyosine base formation Radical_SAM PF04055.21 gi|407465534|ref|YP_006776416.1| - 2.8e-19 70.1 0.1 1.2e-18 68.1 0.0 2.0 2 1 0 2 2 2 1 Radical SAM superfamily Paf67 PF10255.9 gi|407465534|ref|YP_006776416.1| - 0.001 18.2 0.1 0.0015 17.6 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase I-associated factor PAF67 IMP_cyclohyd PF07826.11 gi|407465534|ref|YP_006776416.1| - 0.018 14.6 0.1 0.037 13.6 0.1 1.6 1 1 0 1 1 1 0 IMP cyclohydrolase-like protein Ham1p_like PF01725.16 gi|407465535|ref|YP_006776417.1| - 1.8e-40 138.9 0.0 2e-40 138.7 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Pkinase PF00069.25 gi|407465536|ref|YP_006776418.1| - 5.2e-09 35.9 0.3 6.6e-09 35.5 0.3 1.1 1 0 0 1 1 1 1 Protein kinase domain RIO1 PF01163.22 gi|407465536|ref|YP_006776418.1| - 3.5e-08 33.3 0.0 4.7e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 gi|407465536|ref|YP_006776418.1| - 6.4e-07 28.9 0.0 2.8e-06 26.8 0.0 1.9 2 1 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_Tyr PF07714.17 gi|407465536|ref|YP_006776418.1| - 9.2e-06 25.1 0.0 1.2e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 gi|407465536|ref|YP_006776418.1| - 2.4e-05 24.4 0.0 0.0054 16.7 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family WaaY PF06176.11 gi|407465536|ref|YP_006776418.1| - 0.018 14.7 0.3 0.042 13.5 0.1 1.8 1 1 1 2 2 2 0 Lipopolysaccharide core biosynthesis protein (WaaY) TaqI_C PF12950.7 gi|407465536|ref|YP_006776418.1| - 0.077 13.1 1.0 0.22 11.6 1.0 2.0 1 1 0 1 1 1 0 TaqI-like C-terminal specificity domain bPH_3 PF14470.6 gi|407465537|ref|YP_006776419.1| - 0.036 14.4 0.6 0.22 11.9 0.6 1.9 1 1 0 1 1 1 0 Bacterial PH domain Peptidase_M22 PF00814.25 gi|407465538|ref|YP_006776420.1| - 3.9e-74 249.8 0.0 4.6e-74 249.5 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family MMR_HSR1_C PF08438.10 gi|407465539|ref|YP_006776421.1| - 5.3e-27 94.6 0.0 1.5e-26 93.2 0.0 1.8 2 0 0 2 2 2 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|407465539|ref|YP_006776421.1| - 1.8e-20 73.1 0.1 6.9e-19 68.0 0.0 2.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.21 gi|407465539|ref|YP_006776421.1| - 3.5e-10 39.8 0.2 1.1e-09 38.1 0.2 1.9 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|407465539|ref|YP_006776421.1| - 5e-06 26.1 0.1 3.1e-05 23.5 0.0 2.2 2 0 0 2 2 2 1 Ferrous iron transport protein B YchF-GTPase_C PF06071.13 gi|407465539|ref|YP_006776421.1| - 0.0019 18.3 0.0 0.0051 17.0 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF933) AAA_18 PF13238.6 gi|407465540|ref|YP_006776422.1| - 1.2e-11 45.2 0.4 2.3e-11 44.3 0.4 1.5 1 0 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 gi|407465540|ref|YP_006776422.1| - 9.8e-07 29.1 1.2 0.024 14.8 0.0 2.7 1 1 2 3 3 3 2 Cytidylate kinase-like family AAA_17 PF13207.6 gi|407465540|ref|YP_006776422.1| - 2e-05 25.1 1.0 0.00013 22.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain Cytidylate_kin PF02224.18 gi|407465540|ref|YP_006776422.1| - 0.00068 19.4 0.2 0.096 12.4 0.0 2.1 2 0 0 2 2 2 1 Cytidylate kinase KTI12 PF08433.10 gi|407465540|ref|YP_006776422.1| - 0.00077 19.0 2.7 0.0027 17.2 2.6 1.9 1 1 1 2 2 2 1 Chromatin associated protein KTI12 AAA PF00004.29 gi|407465540|ref|YP_006776422.1| - 0.00082 19.8 0.1 0.013 15.9 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|407465540|ref|YP_006776422.1| - 0.0014 18.5 5.8 0.012 15.6 5.8 2.6 1 1 0 1 1 1 1 NTPase CoaE PF01121.20 gi|407465540|ref|YP_006776422.1| - 0.021 14.5 0.9 0.033 13.9 0.1 1.9 2 1 0 2 2 2 0 Dephospho-CoA kinase MeaB PF03308.16 gi|407465540|ref|YP_006776422.1| - 0.032 13.2 1.4 0.055 12.4 0.1 1.9 2 1 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_5 PF07728.14 gi|407465540|ref|YP_006776422.1| - 0.034 14.1 0.1 0.11 12.5 0.0 1.9 1 1 0 2 2 2 0 AAA domain (dynein-related subfamily) CRISPR_Cas2 PF09827.9 gi|407465540|ref|YP_006776422.1| - 0.043 14.0 2.1 0.14 12.4 0.4 2.3 2 0 0 2 2 2 0 CRISPR associated protein Cas2 SKI PF01202.22 gi|407465540|ref|YP_006776422.1| - 0.062 13.4 0.6 0.16 12.1 0.6 2.0 1 1 0 1 1 1 0 Shikimate kinase AAA_28 PF13521.6 gi|407465540|ref|YP_006776422.1| - 0.067 13.4 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain RuvB_N PF05496.12 gi|407465540|ref|YP_006776422.1| - 0.081 12.7 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 gi|407465540|ref|YP_006776422.1| - 0.084 12.9 1.6 0.28 11.2 0.1 2.0 2 0 0 2 2 2 0 AAA domain DUF2025 PF09634.10 gi|407465540|ref|YP_006776422.1| - 0.096 12.7 0.6 4 7.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2025) RsgA_GTPase PF03193.16 gi|407465540|ref|YP_006776422.1| - 0.2 11.6 2.7 0.32 10.9 0.1 2.4 2 1 0 2 2 2 0 RsgA GTPase TGT PF01702.18 gi|407465541|ref|YP_006776423.1| - 9.8e-68 228.9 0.0 1.6e-67 228.1 0.0 1.3 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase DUF5591 PF17884.1 gi|407465541|ref|YP_006776423.1| - 6.1e-10 39.2 0.2 1.1e-09 38.3 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) DUF1749 PF08538.10 gi|407465541|ref|YP_006776423.1| - 0.062 12.4 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1749) Fer4 PF00037.27 gi|407465542|ref|YP_006776424.1| - 2e-11 43.2 10.3 7.8e-06 25.5 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|407465542|ref|YP_006776424.1| - 4.5e-09 36.7 3.2 6.5e-09 36.2 3.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|407465542|ref|YP_006776424.1| - 8.1e-09 35.2 7.3 7.8e-05 22.6 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|407465542|ref|YP_006776424.1| - 1.2e-08 34.9 1.5 1.7e-08 34.4 1.5 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|407465542|ref|YP_006776424.1| - 1.2e-06 28.2 8.3 0.0014 18.6 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|407465542|ref|YP_006776424.1| - 2.7e-06 27.8 4.5 0.0042 17.6 0.8 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_10 PF13237.6 gi|407465542|ref|YP_006776424.1| - 1.2e-05 25.3 8.0 0.00027 21.0 8.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|407465542|ref|YP_006776424.1| - 1.5e-05 25.0 4.6 8.9e-05 22.6 4.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|407465542|ref|YP_006776424.1| - 8.6e-05 22.7 7.5 0.022 15.2 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|407465542|ref|YP_006776424.1| - 0.00016 22.5 3.4 0.28 12.1 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 gi|407465542|ref|YP_006776424.1| - 0.00092 20.0 2.4 0.43 11.4 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|407465542|ref|YP_006776424.1| - 0.0019 18.9 10.5 0.0072 17.0 2.6 2.3 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|407465542|ref|YP_006776424.1| - 0.0023 18.3 5.7 0.025 15.0 5.9 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|407465542|ref|YP_006776424.1| - 0.0032 18.3 10.4 0.098 13.6 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|407465542|ref|YP_006776424.1| - 0.028 15.0 7.5 1.2 9.7 7.6 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|407465542|ref|YP_006776424.1| - 0.59 10.4 9.7 1.4 9.2 2.5 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain RMMBL PF07521.12 gi|407465544|ref|YP_006776426.1| - 1.9e-15 56.5 0.0 4.6e-15 55.3 0.0 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Beta-Casp PF10996.8 gi|407465544|ref|YP_006776426.1| - 2.3e-15 56.8 0.0 4.2e-15 56.0 0.0 1.4 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B_6 PF16661.5 gi|407465544|ref|YP_006776426.1| - 1.3e-11 44.4 0.0 4.1e-11 42.7 0.0 1.9 3 0 0 3 3 3 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|407465544|ref|YP_006776426.1| - 3e-11 43.2 0.0 4.8e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|407465544|ref|YP_006776426.1| - 1.3e-09 38.4 0.9 2.1e-08 34.4 1.0 2.4 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|407465544|ref|YP_006776426.1| - 1.9e-06 27.9 0.0 9.2e-06 25.6 0.0 2.0 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Beta_lactamase3 PF17030.5 gi|407465544|ref|YP_006776426.1| - 0.0001 21.6 0.0 0.00024 20.4 0.0 1.7 1 1 0 1 1 1 1 Putative beta-lactamase-like family DUF2220 PF09983.9 gi|407465544|ref|YP_006776426.1| - 0.036 13.4 0.0 0.06 12.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria C-term(DUF2220) HhH-GPD PF00730.25 gi|407465545|ref|YP_006776427.1| - 1.2e-11 45.0 0.0 2.3e-11 44.1 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein OGG_N PF07934.12 gi|407465545|ref|YP_006776427.1| - 7.7e-09 35.7 0.3 0.005 16.9 0.1 2.6 1 1 1 2 2 2 2 8-oxoguanine DNA glycosylase, N-terminal domain HHH PF00633.23 gi|407465545|ref|YP_006776427.1| - 0.00043 20.0 0.0 0.0023 17.7 0.0 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|407465545|ref|YP_006776427.1| - 0.011 16.3 0.0 0.17 12.5 0.0 2.7 3 1 0 3 3 3 0 Helix-hairpin-helix domain DUF3755 PF12579.8 gi|407465545|ref|YP_006776427.1| - 0.013 15.1 0.1 3.6 7.3 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3755) HHH_2 PF12826.7 gi|407465545|ref|YP_006776427.1| - 0.056 13.5 0.0 0.51 10.5 0.0 2.5 3 0 0 3 3 3 0 Helix-hairpin-helix motif DUF4974 PF16344.5 gi|407465545|ref|YP_006776427.1| - 0.22 11.5 8.0 8.1 6.5 0.2 3.6 3 1 0 3 3 3 0 Domain of unknown function (DUF4974) DUF3579 PF12112.8 gi|407465546|ref|YP_006776428.1| - 0.078 13.5 0.0 0.11 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3579) Copper-bind PF00127.20 gi|407465547|ref|YP_006776429.1| - 7.4e-06 26.3 0.0 1.1e-05 25.8 0.0 1.3 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|407465547|ref|YP_006776429.1| - 1.5e-05 25.0 0.0 2.3e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Cupredoxin-like domain Lipase_C PF18067.1 gi|407465547|ref|YP_006776429.1| - 0.00021 21.8 0.0 0.00028 21.4 0.0 1.2 1 0 0 1 1 1 1 Lipase C-terminal domain Cytochrome_B PF00033.19 gi|407465548|ref|YP_006776430.1| - 4.2e-28 98.4 10.4 4.2e-28 98.4 10.4 2.9 3 0 0 3 3 3 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 gi|407465548|ref|YP_006776430.1| - 6.6e-25 88.1 5.4 6.6e-25 88.1 5.4 3.2 3 1 0 3 3 3 1 Cytochrome b(N-terminal)/b6/petB Cytochrom_B_C PF00032.17 gi|407465548|ref|YP_006776430.1| - 6.5e-08 32.8 2.3 6.5e-08 32.8 2.3 3.3 3 0 0 3 3 3 1 Cytochrome b(C-terminal)/b6/petD DUF4405 PF14358.6 gi|407465548|ref|YP_006776430.1| - 9.5e-05 22.9 3.5 9.5e-05 22.9 3.5 3.9 4 1 0 4 4 4 1 Domain of unknown function (DUF4405) Tetraspanin PF00335.20 gi|407465548|ref|YP_006776430.1| - 0.079 12.7 1.0 0.39 10.4 0.0 2.5 3 0 0 3 3 3 0 Tetraspanin family PTPLA PF04387.14 gi|407465548|ref|YP_006776430.1| - 0.45 10.2 13.7 1.1 9.0 2.0 3.5 2 2 1 3 3 3 0 Protein tyrosine phosphatase-like protein, PTPLA OppC_N PF12911.7 gi|407465548|ref|YP_006776430.1| - 1.3 9.1 6.8 2.3 8.3 0.5 3.8 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C S1FA PF04689.13 gi|407465548|ref|YP_006776430.1| - 8 6.7 5.5 1.7 8.8 0.1 2.7 3 0 0 3 3 3 0 DNA binding protein S1FA Rieske PF00355.26 gi|407465549|ref|YP_006776431.1| - 1.1e-06 28.4 0.0 1.7e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain TAT_signal PF10518.9 gi|407465549|ref|YP_006776431.1| - 2.8e-05 23.7 1.0 5.2e-05 22.9 1.0 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 gi|407465549|ref|YP_006776431.1| - 0.0013 18.0 0.1 0.0034 16.7 0.1 1.6 1 0 0 1 1 1 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Peptidase_S8 PF00082.22 gi|407465550|ref|YP_006776432.1| - 1.5e-33 116.3 0.0 3.8e-33 115.0 0.0 1.7 1 1 0 1 1 1 1 Subtilase family fn3_5 PF06280.12 gi|407465550|ref|YP_006776432.1| - 3e-05 24.7 1.4 0.00029 21.5 0.0 2.6 2 0 0 2 2 2 1 Fn3-like domain DUF916 PF06030.12 gi|407465550|ref|YP_006776432.1| - 0.0015 18.6 0.9 0.36 10.9 0.0 3.3 4 0 0 4 4 4 1 Bacterial protein of unknown function (DUF916) fn3_6 PF17766.1 gi|407465550|ref|YP_006776432.1| - 0.09 13.0 0.3 4.5 7.5 0.1 2.6 2 0 0 2 2 2 0 Fibronectin type-III domain EF-hand_6 PF13405.6 gi|407465550|ref|YP_006776432.1| - 0.42 10.7 1.6 10 6.3 0.0 3.2 3 0 0 3 3 3 0 EF-hand domain Mce4_CUP1 PF11887.8 gi|407465551|ref|YP_006776433.1| - 0.04 13.4 0.2 0.071 12.6 0.2 1.3 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative SpaA PF17802.1 gi|407465551|ref|YP_006776433.1| - 0.041 14.2 0.8 0.11 12.9 0.1 2.0 2 0 0 2 2 2 0 Prealbumin-like fold domain ASH PF15780.5 gi|407465552|ref|YP_006776434.1| - 0.17 12.1 0.7 0.64 10.3 0.0 2.3 2 0 0 2 2 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin 3Beta_HSD PF01073.19 gi|407465553|ref|YP_006776435.1| - 2.6e-23 82.4 0.4 2.8e-23 82.3 0.4 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 gi|407465553|ref|YP_006776435.1| - 3.2e-23 82.4 0.0 3.5e-23 82.3 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|407465553|ref|YP_006776435.1| - 6.4e-22 78.4 0.0 6.9e-22 78.3 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 gi|407465553|ref|YP_006776435.1| - 9.7e-12 44.6 0.8 2.3e-05 23.7 0.1 2.0 1 1 1 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 gi|407465553|ref|YP_006776435.1| - 8.7e-11 41.5 0.1 1e-10 41.3 0.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|407465553|ref|YP_006776435.1| - 2.8e-09 36.5 0.0 3.3e-09 36.3 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 gi|407465553|ref|YP_006776435.1| - 1.4e-08 34.6 0.0 3.9e-08 33.1 0.0 1.6 1 1 1 2 2 2 1 NmrA-like family NAD_binding_10 PF13460.6 gi|407465553|ref|YP_006776435.1| - 1.6e-07 31.4 0.0 1.7e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 NAD(P)H-binding TrkA_N PF02254.18 gi|407465553|ref|YP_006776435.1| - 0.00079 19.7 0.1 0.0012 19.1 0.1 1.3 1 1 0 1 1 1 1 TrkA-N domain adh_short PF00106.25 gi|407465553|ref|YP_006776435.1| - 0.001 18.6 0.1 0.0014 18.1 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|407465553|ref|YP_006776435.1| - 0.0051 16.7 0.1 0.007 16.3 0.1 1.4 1 1 0 1 1 1 1 KR domain DapB_N PF01113.20 gi|407465553|ref|YP_006776435.1| - 0.0057 16.8 0.1 0.0067 16.5 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 gi|407465553|ref|YP_006776435.1| - 0.008 16.4 0.4 0.013 15.8 0.0 1.5 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Epimerase PF01370.21 gi|407465554|ref|YP_006776436.1| - 5.1e-14 52.3 0.0 7e-14 51.9 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|407465554|ref|YP_006776436.1| - 3.1e-13 49.8 0.0 7.3e-13 48.6 0.0 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|407465554|ref|YP_006776436.1| - 0.0018 17.5 0.0 0.0023 17.1 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Glycos_transf_2 PF00535.26 gi|407465555|ref|YP_006776437.1| - 1.4e-25 90.1 0.1 2.1e-25 89.5 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|407465555|ref|YP_006776437.1| - 9.1e-08 32.3 0.0 1.4e-07 31.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|407465555|ref|YP_006776437.1| - 0.00017 22.0 0.0 0.00036 21.0 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 2 CTP_transf_3 PF02348.19 gi|407465555|ref|YP_006776437.1| - 0.02 14.8 0.1 0.026 14.5 0.1 1.2 1 0 0 1 1 1 0 Cytidylyltransferase DUF374 PF04028.13 gi|407465555|ref|YP_006776437.1| - 0.056 13.0 0.1 0.15 11.7 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF374) Glyco_tranf_2_2 PF10111.9 gi|407465555|ref|YP_006776437.1| - 0.063 12.7 0.1 0.15 11.5 0.1 1.5 2 0 0 2 2 2 0 Glycosyltransferase like family 2 SpoIIM PF01944.17 gi|407465556|ref|YP_006776438.1| - 6.1e-07 29.6 15.7 8e-07 29.2 15.7 1.1 1 0 0 1 1 1 1 Stage II sporulation protein M DUF3989 PF13150.6 gi|407465556|ref|YP_006776438.1| - 0.051 13.3 0.8 0.38 10.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) P-II PF00543.22 gi|407465557|ref|YP_006776439.1| - 6.7e-29 100.5 1.2 7.6e-29 100.3 1.2 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II HTH_5 PF01022.20 gi|407465558|ref|YP_006776440.1| - 5.9e-07 29.3 0.2 1e-06 28.5 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|407465558|ref|YP_006776440.1| - 0.00029 20.7 0.1 0.0007 19.5 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 gi|407465558|ref|YP_006776440.1| - 0.0003 20.3 0.2 0.00077 19.0 0.2 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|407465558|ref|YP_006776440.1| - 0.00038 20.4 0.0 0.00078 19.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain DUF505 PF04458.12 gi|407465558|ref|YP_006776440.1| - 0.00045 18.7 0.0 0.00073 18.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF505) MarR PF01047.22 gi|407465558|ref|YP_006776440.1| - 0.0014 18.5 0.1 0.0032 17.4 0.1 1.6 1 0 0 1 1 1 1 MarR family DUF4423 PF14394.6 gi|407465558|ref|YP_006776440.1| - 0.0016 18.2 0.1 0.0035 17.1 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_IclR PF09339.10 gi|407465558|ref|YP_006776440.1| - 0.0019 18.0 0.0 0.0029 17.4 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_45 PF14947.6 gi|407465558|ref|YP_006776440.1| - 0.0024 17.8 0.1 0.0099 15.8 0.1 2.0 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1724 PF08350.10 gi|407465558|ref|YP_006776440.1| - 0.0031 17.6 0.1 0.0067 16.5 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_29 PF13551.6 gi|407465558|ref|YP_006776440.1| - 0.0049 16.9 0.0 0.0082 16.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix MarR_2 PF12802.7 gi|407465558|ref|YP_006776440.1| - 0.0089 15.9 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|407465558|ref|YP_006776440.1| - 0.027 14.4 0.0 0.051 13.5 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_37 PF13744.6 gi|407465558|ref|YP_006776440.1| - 0.071 13.1 0.1 0.13 12.2 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain IF2_N PF04760.15 gi|407465558|ref|YP_006776440.1| - 0.071 12.9 0.3 2.6 7.9 0.1 2.7 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HTH_DeoR PF08220.12 gi|407465558|ref|YP_006776440.1| - 0.12 12.2 0.1 0.2 11.4 0.1 1.3 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain DDRGK PF09756.9 gi|407465558|ref|YP_006776440.1| - 0.12 12.0 0.8 0.17 11.5 0.2 1.5 2 0 0 2 2 2 0 DDRGK domain Mrr_N PF14338.6 gi|407465558|ref|YP_006776440.1| - 0.16 12.2 0.0 0.6 10.3 0.0 2.0 2 1 0 2 2 2 0 Mrr N-terminal domain Guanylate_cyc PF00211.20 gi|407465559|ref|YP_006776441.1| - 3.1e-10 40.0 0.1 3.7e-10 39.7 0.1 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Guanylate_cyc PF00211.20 gi|407465561|ref|YP_006776443.1| - 0.057 13.0 0.0 0.16 11.6 0.0 1.8 2 0 0 2 2 2 0 Adenylate and Guanylate cyclase catalytic domain Sld7_N PF18636.1 gi|407465562|ref|YP_006776444.1| - 0.021 15.1 0.1 0.04 14.2 0.1 1.5 1 0 0 1 1 1 0 Mitochondrial morphogenesis protein SLD7 N-terminal domain DUF4296 PF14129.6 gi|407465562|ref|YP_006776444.1| - 9.7 6.9 11.2 12 6.5 0.3 4.0 3 1 0 3 3 3 0 Domain of unknown function (DUF4296) Chordopox_G2 PF05796.12 gi|407465563|ref|YP_006776445.1| - 0.15 11.5 0.0 0.23 10.9 0.0 1.2 1 0 0 1 1 1 0 Chordopoxvirus protein G2 Laminin_G_3 PF13385.6 gi|407465564|ref|YP_006776446.1| - 5.8e-41 140.2 23.1 3.3e-21 76.0 1.4 4.6 5 0 0 5 5 5 2 Concanavalin A-like lectin/glucanases superfamily CARDB PF07705.11 gi|407465564|ref|YP_006776446.1| - 4.5e-13 49.3 1.6 4.5e-13 49.3 1.6 4.1 3 0 0 3 3 3 1 CARDB Laminin_G_2 PF02210.24 gi|407465564|ref|YP_006776446.1| - 8.9e-13 48.9 5.1 1.9e-05 25.2 0.2 3.9 5 0 0 5 5 5 2 Laminin G domain Lectin_C PF00059.21 gi|407465564|ref|YP_006776446.1| - 2.5e-08 34.6 0.0 7.9e-08 33.0 0.0 1.8 1 0 0 1 1 1 1 Lectin C-type domain DUF5011 PF16403.5 gi|407465564|ref|YP_006776446.1| - 7.6e-07 29.2 3.6 9.9e-07 28.8 0.9 2.8 2 0 0 2 2 2 1 Domain of unknown function (DUF5011) Pentaxin PF00354.17 gi|407465564|ref|YP_006776446.1| - 2.2e-06 27.5 0.1 0.00043 20.0 0.1 2.6 2 0 0 2 2 2 1 Pentaxin family Glyco_hydro_16 PF00722.21 gi|407465564|ref|YP_006776446.1| - 0.012 15.1 0.0 0.17 11.3 0.0 2.6 2 0 0 2 2 2 0 Glycosyl hydrolases family 16 TGF_beta_GS PF08515.12 gi|407465564|ref|YP_006776446.1| - 0.066 12.7 0.1 0.31 10.6 0.1 2.2 1 0 0 1 1 1 0 Transforming growth factor beta type I GS-motif Bd3614_N PF14442.6 gi|407465564|ref|YP_006776446.1| - 0.73 10.2 6.5 8.2 6.8 0.4 2.8 1 1 1 2 2 2 0 Bd3614-like deaminase N-terminal NTP_transferase PF00483.23 gi|407465565|ref|YP_006776447.1| - 1.1e-13 51.4 0.0 1.4e-13 51.0 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|407465565|ref|YP_006776447.1| - 6.7e-13 47.8 10.5 4.3e-06 26.2 1.5 3.5 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|407465565|ref|YP_006776447.1| - 2.4e-07 30.4 2.3 2.4e-07 30.4 2.3 3.1 3 0 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 gi|407465565|ref|YP_006776447.1| - 0.0015 16.7 1.6 0.0031 15.7 1.1 1.6 1 1 1 2 2 2 2 Domain of unknown function (DUF4954) Fucokinase PF07959.12 gi|407465565|ref|YP_006776447.1| - 0.011 14.7 0.5 0.015 14.3 0.5 1.2 1 0 0 1 1 1 0 L-fucokinase NTP_transferase PF00483.23 gi|407465566|ref|YP_006776448.1| - 8.1e-35 120.6 0.0 9.8e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|407465566|ref|YP_006776448.1| - 9.3e-11 42.3 0.0 1.1e-10 42.1 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain AhpC-TSA_2 PF13911.6 gi|407465566|ref|YP_006776448.1| - 0.075 13.2 0.0 0.099 12.8 0.0 1.3 1 1 0 1 1 1 0 AhpC/TSA antioxidant enzyme RmlD_sub_bind PF04321.17 gi|407465567|ref|YP_006776449.1| - 1.5e-67 227.7 0.0 1.6e-67 227.6 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|407465567|ref|YP_006776449.1| - 5.8e-25 88.2 0.0 1.2e-24 87.1 0.0 1.5 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|407465567|ref|YP_006776449.1| - 3.2e-17 63.0 0.1 2.7e-16 59.9 0.1 2.2 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 gi|407465567|ref|YP_006776449.1| - 6e-09 35.5 0.0 1.5e-06 27.6 0.0 2.6 1 1 1 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 gi|407465567|ref|YP_006776449.1| - 1.4e-08 34.2 2.4 1.7e-07 30.7 1.6 2.6 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|407465567|ref|YP_006776449.1| - 7.9e-06 25.1 0.2 2.3e-05 23.5 0.2 1.9 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family DapB_N PF01113.20 gi|407465567|ref|YP_006776449.1| - 0.023 14.8 0.0 2.8 8.1 0.0 2.4 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus GDP_Man_Dehyd PF16363.5 gi|407465568|ref|YP_006776450.1| - 6.7e-76 255.8 0.0 7.8e-76 255.6 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|407465568|ref|YP_006776450.1| - 1.2e-57 195.2 0.0 1.4e-57 194.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|407465568|ref|YP_006776450.1| - 4.5e-22 78.4 0.1 5.8e-22 78.0 0.1 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|407465568|ref|YP_006776450.1| - 4.2e-18 65.4 0.0 6.3e-18 64.9 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|407465568|ref|YP_006776450.1| - 6.3e-14 51.8 0.1 3.2e-11 42.9 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 gi|407465568|ref|YP_006776450.1| - 1.7e-13 50.3 0.0 2.3e-12 46.7 0.0 2.2 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein Sacchrp_dh_NADP PF03435.18 gi|407465568|ref|YP_006776450.1| - 4.4e-05 23.7 0.1 8.4e-05 22.8 0.1 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 gi|407465568|ref|YP_006776450.1| - 5.3e-05 23.2 0.0 7.9e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|407465568|ref|YP_006776450.1| - 0.00011 21.9 0.0 0.00019 21.1 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|407465568|ref|YP_006776450.1| - 0.0018 17.7 0.0 0.0047 16.4 0.0 1.6 1 1 0 1 1 1 1 short chain dehydrogenase dTDP_sugar_isom PF00908.17 gi|407465569|ref|YP_006776451.1| - 7e-73 243.8 0.0 7.9e-73 243.7 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase Epimerase_2 PF02350.19 gi|407465570|ref|YP_006776452.1| - 1.4e-116 389.2 0.0 1.7e-116 388.9 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.6 gi|407465570|ref|YP_006776452.1| - 0.0004 20.4 0.5 0.0023 18.0 0.0 2.4 3 0 0 3 3 3 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|407465570|ref|YP_006776452.1| - 0.00052 20.1 0.0 0.0012 18.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 MGDG_synth PF06925.11 gi|407465570|ref|YP_006776452.1| - 0.1 12.7 0.2 8 6.5 0.0 3.0 3 0 0 3 3 3 0 Monogalactosyldiacylglycerol (MGDG) synthase Glycos_transf_2 PF00535.26 gi|407465571|ref|YP_006776453.1| - 2.5e-26 92.5 0.3 2.5e-26 92.5 0.3 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|407465571|ref|YP_006776453.1| - 6.3e-26 91.7 0.0 8e-26 91.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|407465571|ref|YP_006776453.1| - 1.9e-06 27.9 0.1 3.4e-06 27.1 0.1 1.5 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_5 PF13712.6 gi|407465571|ref|YP_006776453.1| - 3.9e-05 23.5 0.5 0.00016 21.4 0.5 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family Glyco_transf_21 PF13506.6 gi|407465571|ref|YP_006776453.1| - 0.0017 17.9 0.0 0.0025 17.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|407465571|ref|YP_006776453.1| - 0.005 17.3 0.0 0.013 16.0 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|407465571|ref|YP_006776453.1| - 0.006 16.1 2.4 0.0099 15.4 0.6 2.2 1 1 2 3 3 3 1 Glycosyltransferase like family 2 MPS-4 PF17523.2 gi|407465571|ref|YP_006776453.1| - 0.05 13.7 0.8 0.12 12.5 0.8 1.6 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Glyco_trans_1_4 PF13692.6 gi|407465572|ref|YP_006776454.1| - 4.5e-14 53.0 0.0 7.1e-14 52.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|407465572|ref|YP_006776454.1| - 9e-10 38.4 0.1 7e-09 35.5 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|407465572|ref|YP_006776454.1| - 0.0038 17.6 0.0 0.011 16.2 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|407465572|ref|YP_006776454.1| - 0.068 13.2 0.0 0.28 11.2 0.0 1.9 2 0 0 2 2 2 0 Glycosyltransferase Family 4 DUF3892 PF13031.6 gi|407465573|ref|YP_006776455.1| - 6.6e-05 23.5 0.1 0.0001 22.9 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3892) PARP_reg PF02877.14 gi|407465576|ref|YP_006776458.1| - 0.29 11.2 4.5 0.35 11.0 2.5 2.1 1 1 1 2 2 2 0 Poly(ADP-ribose) polymerase, regulatory domain CDC37_C PF08564.10 gi|407465579|ref|YP_006776461.1| - 0.00028 21.0 1.3 0.47 10.6 0.0 2.5 1 1 1 2 2 2 2 Cdc37 C terminal domain DDE_Tnp_ISL3 PF01610.17 gi|407465579|ref|YP_006776461.1| - 0.0065 16.2 5.1 0.07 12.8 0.4 2.2 1 1 1 2 2 2 2 Transposase ERp29 PF07749.12 gi|407465579|ref|YP_006776461.1| - 0.008 17.1 1.4 1.7 9.6 0.1 2.2 1 1 1 2 2 2 2 Endoplasmic reticulum protein ERp29, C-terminal domain Phasin PF05597.11 gi|407465579|ref|YP_006776461.1| - 0.013 15.5 0.3 0.037 14.0 0.2 1.6 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) ECH_1 PF00378.20 gi|407465579|ref|YP_006776461.1| - 0.031 13.6 3.5 0.32 10.3 0.7 2.0 1 1 1 2 2 2 0 Enoyl-CoA hydratase/isomerase YkyA PF10368.9 gi|407465579|ref|YP_006776461.1| - 0.039 13.6 2.8 0.17 11.6 0.3 2.3 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein DUF4446 PF14584.6 gi|407465579|ref|YP_006776461.1| - 0.052 13.5 2.3 4.5 7.2 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) ACP PF06857.11 gi|407465579|ref|YP_006776461.1| - 0.089 13.0 0.8 9.7 6.5 0.0 3.2 1 1 3 4 4 4 0 Malonate decarboxylase delta subunit (MdcD) DUF5486 PF17588.2 gi|407465579|ref|YP_006776461.1| - 0.1 12.5 0.4 4.3 7.3 0.0 2.8 2 1 0 3 3 3 0 Family of unknown function (DUF5486) HNOB PF07700.15 gi|407465579|ref|YP_006776461.1| - 0.11 12.5 1.1 0.16 11.9 0.8 1.5 1 1 0 1 1 1 0 Haem-NO-binding DASH_Dad2 PF08654.10 gi|407465579|ref|YP_006776461.1| - 0.13 12.7 5.0 1.1 9.7 0.5 2.7 1 1 2 3 3 3 0 DASH complex subunit Dad2 Spore_III_AB PF09548.10 gi|407465579|ref|YP_006776461.1| - 0.17 12.0 5.6 0.39 10.8 5.6 1.7 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) Mating_N PF12731.7 gi|407465579|ref|YP_006776461.1| - 0.41 10.8 4.1 1.5 9.0 1.1 2.8 1 1 1 2 2 2 0 Mating-type protein beta 1 MbeD_MobD PF04899.12 gi|407465579|ref|YP_006776461.1| - 2.1 8.5 10.3 0.072 13.2 1.7 2.6 2 1 0 2 2 2 0 MbeD/MobD like Coatomer_g_Cpla PF16381.5 gi|407465579|ref|YP_006776461.1| - 3.2 7.9 9.2 0.13 12.4 0.9 2.4 1 1 1 2 2 2 0 Coatomer subunit gamma-1 C-terminal appendage platform 4HBT PF03061.22 gi|407465580|ref|YP_006776462.1| - 5e-16 58.8 0.1 7e-16 58.4 0.1 1.2 1 0 0 1 1 1 1 Thioesterase superfamily MaoC_dehydratas PF01575.19 gi|407465580|ref|YP_006776462.1| - 0.00089 18.8 0.2 0.0014 18.2 0.2 1.2 1 0 0 1 1 1 1 MaoC like domain UbiD PF01977.16 gi|407465581|ref|YP_006776463.1| - 7e-91 305.1 0.0 8e-91 304.9 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PAC4 PF16093.5 gi|407465582|ref|YP_006776464.1| - 5.5e-08 32.9 0.1 6.9e-08 32.6 0.1 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 LPP20 PF02169.16 gi|407465583|ref|YP_006776465.1| - 0.034 14.5 2.8 0.059 13.7 2.8 1.3 1 0 0 1 1 1 0 LPP20 lipoprotein Jas PF16135.5 gi|407465583|ref|YP_006776465.1| - 0.064 13.4 6.7 3.4 7.9 2.2 2.3 2 0 0 2 2 2 0 TPL-binding domain in jasmonate signalling C1_1 PF00130.22 gi|407465583|ref|YP_006776465.1| - 0.84 9.6 11.6 1.5 8.8 1.4 2.5 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zinc_ribbon_15 PF17032.5 gi|407465583|ref|YP_006776465.1| - 5.7 7.8 13.2 8.7 7.2 4.0 2.4 2 0 0 2 2 2 0 zinc-ribbon family DUF460 PF04312.13 gi|407465584|ref|YP_006776466.1| - 0.032 13.9 0.0 0.055 13.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF460) DivIVA PF05103.13 gi|407465585|ref|YP_006776467.1| - 0.00088 19.4 5.3 0.0011 19.1 5.3 1.1 1 0 0 1 1 1 1 DivIVA protein Tropomyosin PF00261.20 gi|407465585|ref|YP_006776467.1| - 0.0023 17.3 5.7 0.0027 17.1 5.7 1.1 1 0 0 1 1 1 1 Tropomyosin V-ATPase_G_2 PF16999.5 gi|407465585|ref|YP_006776467.1| - 0.0062 16.9 9.7 0.058 13.8 8.4 2.5 2 1 0 2 2 2 1 Vacuolar (H+)-ATPase G subunit XH PF03469.14 gi|407465585|ref|YP_006776467.1| - 0.041 13.8 1.7 1.8 8.5 0.1 2.1 1 1 1 2 2 2 0 XH domain DUF3723 PF12520.8 gi|407465585|ref|YP_006776467.1| - 0.052 12.2 0.1 0.062 12.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3723) YabA PF06156.13 gi|407465585|ref|YP_006776467.1| - 0.06 14.0 0.9 0.088 13.5 0.9 1.3 1 0 0 1 1 1 0 Initiation control protein YabA Spc24 PF08286.11 gi|407465585|ref|YP_006776467.1| - 0.11 12.7 3.9 0.44 10.8 3.9 1.9 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF883 PF05957.13 gi|407465585|ref|YP_006776467.1| - 0.49 11.0 4.7 8.5 7.1 4.7 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) DUF1664 PF07889.12 gi|407465585|ref|YP_006776467.1| - 0.5 10.4 4.5 0.89 9.6 3.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF1059 PF06348.11 gi|407465586|ref|YP_006776468.1| - 2.1e-05 24.7 0.0 3e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) HTH_33 PF13592.6 gi|407465586|ref|YP_006776468.1| - 0.095 12.4 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix NAC PF01849.18 gi|407465587|ref|YP_006776469.1| - 4.4e-14 52.2 2.0 4.5e-14 52.1 1.0 1.5 2 0 0 2 2 2 1 NAC domain UBA_4 PF14555.6 gi|407465587|ref|YP_006776469.1| - 0.0066 16.2 0.1 0.0095 15.7 0.1 1.3 1 0 0 1 1 1 1 UBA-like domain PUA PF01472.20 gi|407465588|ref|YP_006776470.1| - 1.2e-08 34.8 0.2 2.3e-08 33.9 0.2 1.5 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.6 gi|407465588|ref|YP_006776470.1| - 1.5e-07 31.5 0.0 2.5e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PhoU PF01895.19 gi|407465589|ref|YP_006776471.1| - 2.5e-25 88.7 12.8 2.8e-17 63.0 1.5 2.4 2 0 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 gi|407465589|ref|YP_006776471.1| - 1e-07 31.7 0.0 4.1e-07 29.8 0.0 2.1 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin IMD PF08397.11 gi|407465589|ref|YP_006776471.1| - 0.0083 15.5 0.9 0.019 14.4 0.9 1.6 1 0 0 1 1 1 1 IRSp53/MIM homology domain UBA PF00627.31 gi|407465589|ref|YP_006776471.1| - 0.024 14.5 0.2 5.9 6.9 0.0 3.3 2 0 0 2 2 2 0 UBA/TS-N domain VSG_B PF13206.6 gi|407465589|ref|YP_006776471.1| - 0.19 10.9 1.4 0.31 10.3 1.4 1.2 1 0 0 1 1 1 0 Trypanosomal VSG domain GTP-bdg_N PF13167.6 gi|407465590|ref|YP_006776472.1| - 8.2e-19 68.1 0.0 2.7e-18 66.4 0.0 2.0 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal MMR_HSR1 PF01926.23 gi|407465590|ref|YP_006776472.1| - 1.1e-16 60.9 1.9 1.4e-16 60.6 0.3 2.0 3 0 0 3 3 3 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|407465590|ref|YP_006776472.1| - 1.3e-16 60.9 2.8 4.3e-16 59.3 2.8 1.9 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region FeoB_N PF02421.18 gi|407465590|ref|YP_006776472.1| - 4e-11 42.7 0.7 7.1e-11 41.9 0.7 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|407465590|ref|YP_006776472.1| - 3.6e-08 33.5 6.3 0.00087 19.2 0.3 2.5 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 gi|407465590|ref|YP_006776472.1| - 6.8e-05 22.5 3.0 0.0006 19.4 2.4 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Arf PF00025.21 gi|407465590|ref|YP_006776472.1| - 8.9e-05 22.0 2.3 0.00019 20.9 2.2 1.7 1 1 0 1 1 1 1 ADP-ribosylation factor family MnmE_helical PF12631.7 gi|407465590|ref|YP_006776472.1| - 0.00012 22.4 0.3 0.00027 21.2 0.3 1.5 1 0 0 1 1 1 1 MnmE helical domain MMR_HSR1_Xtn PF16897.5 gi|407465590|ref|YP_006776472.1| - 0.0011 18.9 1.8 0.0021 18.1 0.5 2.0 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain Trans_reg_C PF00486.28 gi|407465590|ref|YP_006776472.1| - 0.0056 16.7 0.2 0.49 10.5 0.0 2.8 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal PduV-EutP PF10662.9 gi|407465590|ref|YP_006776472.1| - 0.0078 16.0 7.4 0.051 13.3 5.6 2.7 2 1 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 gi|407465590|ref|YP_006776472.1| - 0.012 15.8 1.2 0.58 10.4 1.0 3.1 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase cobW PF02492.19 gi|407465590|ref|YP_006776472.1| - 0.036 13.6 4.2 2.2 7.8 0.3 2.5 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 gi|407465590|ref|YP_006776472.1| - 1 9.4 4.9 12 6.0 4.9 2.8 1 1 0 1 1 1 0 Dynamin family Med9 PF07544.13 gi|407465590|ref|YP_006776472.1| - 5.3 7.2 9.7 8.2 6.6 0.3 3.5 4 1 0 4 4 3 0 RNA polymerase II transcription mediator complex subunit 9 Trm56 PF01994.16 gi|407465591|ref|YP_006776473.1| - 3.3e-50 169.0 0.8 4.2e-50 168.6 0.3 1.4 2 0 0 2 2 2 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SpoU_methylase PF00588.19 gi|407465591|ref|YP_006776473.1| - 2.2e-05 24.7 0.0 3.1e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family CsgE PF10627.9 gi|407465591|ref|YP_006776473.1| - 0.0013 18.9 0.1 0.52 10.6 0.0 2.9 2 1 1 3 3 3 2 Curli assembly protein CsgE SPOUT_MTase_2 PF14419.6 gi|407465591|ref|YP_006776473.1| - 0.03 13.7 0.0 0.047 13.1 0.0 1.3 1 0 0 1 1 1 0 AF2226-like SPOUT RNA Methylase fused to THUMP Methyltrn_RNA_4 PF09936.9 gi|407465591|ref|YP_006776473.1| - 0.036 13.9 0.4 0.42 10.5 0.0 2.1 1 1 1 2 2 2 0 SAM-dependent RNA methyltransferase DUF3085 PF11284.8 gi|407465591|ref|YP_006776473.1| - 0.09 13.1 0.0 0.16 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3085) TFIIE_alpha PF02002.17 gi|407465592|ref|YP_006776474.1| - 1.1e-15 57.3 1.3 1.1e-15 57.3 1.3 1.5 2 0 0 2 2 2 1 TFIIE alpha subunit Sushi_2 PF09014.10 gi|407465592|ref|YP_006776474.1| - 0.023 14.5 1.8 0.039 13.9 1.8 1.3 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain TrmB PF01978.19 gi|407465592|ref|YP_006776474.1| - 0.069 13.1 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Sigma70_r3 PF04539.16 gi|407465592|ref|YP_006776474.1| - 0.07 13.2 0.7 0.2 11.7 0.0 2.0 2 0 0 2 2 2 0 Sigma-70 region 3 zf-C3HC PF07967.13 gi|407465592|ref|YP_006776474.1| - 0.12 12.4 2.0 0.14 12.2 0.9 1.7 1 1 1 2 2 2 0 C3HC zinc finger-like zf_CopZ PF18423.1 gi|407465592|ref|YP_006776474.1| - 0.51 10.3 4.9 0.35 10.9 1.3 2.2 1 1 1 2 2 2 0 Zinc binding domain Aldedh PF00171.22 gi|407465593|ref|YP_006776475.1| - 1.1e-145 485.7 0.1 1.2e-145 485.6 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family SNAD3 PF18749.1 gi|407465593|ref|YP_006776475.1| - 0.035 13.3 0.1 0.071 12.3 0.1 1.4 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 3 Colicin_immun PF09204.10 gi|407465594|ref|YP_006776476.1| - 0.15 12.6 4.1 0.65 10.6 4.1 1.9 1 1 0 1 1 1 0 Bacterial self-protective colicin-like immunity Hemerythrin PF01814.23 gi|407465595|ref|YP_006776477.1| - 7.4e-13 49.3 0.6 2.7e-12 47.5 0.1 2.1 2 1 0 2 2 2 1 Hemerythrin HHE cation binding domain Prominin PF05478.11 gi|407465595|ref|YP_006776477.1| - 0.00016 19.8 0.6 0.00022 19.3 0.6 1.1 1 0 0 1 1 1 1 Prominin DUF3347 PF11827.8 gi|407465595|ref|YP_006776477.1| - 0.02 15.1 3.3 0.048 13.9 2.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) IZUMO PF15005.6 gi|407465595|ref|YP_006776477.1| - 0.074 13.6 2.1 0.074 13.6 1.0 1.7 2 0 0 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated UPF0113_N PF17833.1 gi|407465595|ref|YP_006776477.1| - 0.084 13.4 0.3 0.14 12.7 0.3 1.8 1 1 0 1 1 1 0 UPF0113 Pre-PUA domain DUF1043 PF06295.12 gi|407465595|ref|YP_006776477.1| - 0.13 12.3 2.6 0.54 10.3 2.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1043) Fib_alpha PF08702.10 gi|407465595|ref|YP_006776477.1| - 1 9.6 5.2 8.3 6.6 1.4 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family SWIB PF02201.18 gi|407465596|ref|YP_006776478.1| - 0.0064 16.3 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 SWIB/MDM2 domain RibD_C PF01872.17 gi|407465597|ref|YP_006776479.1| - 5.1e-51 173.3 0.1 5.7e-51 173.2 0.1 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Mannosyl_trans3 PF11051.8 gi|407465597|ref|YP_006776479.1| - 0.013 14.9 0.6 0.9 8.8 0.1 2.1 1 1 1 2 2 2 0 Mannosyltransferase putative Amidohydro_1 PF01979.20 gi|407465598|ref|YP_006776480.1| - 9.4e-42 143.5 0.3 1.1e-41 143.3 0.3 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|407465598|ref|YP_006776480.1| - 1.4e-13 51.2 0.0 3.1e-07 30.2 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase family GCH_III PF05165.12 gi|407465599|ref|YP_006776481.1| - 7.1e-51 172.9 0.0 9e-51 172.5 0.0 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase III mCpol PF18182.1 gi|407465599|ref|YP_006776481.1| - 5.4e-08 33.2 1.8 0.0031 17.8 0.3 2.3 2 0 0 2 2 2 2 minimal CRISPR polymerase domain Guanylate_cyc PF00211.20 gi|407465599|ref|YP_006776481.1| - 0.00054 19.6 0.2 0.0011 18.6 0.1 1.7 2 0 0 2 2 2 1 Adenylate and Guanylate cyclase catalytic domain Ribosomal_L5 PF00281.19 gi|407465599|ref|YP_006776481.1| - 0.014 15.7 0.5 0.075 13.4 0.1 2.3 3 0 0 3 3 3 0 Ribosomal protein L5 NOG1 PF06858.14 gi|407465599|ref|YP_006776481.1| - 0.015 15.0 0.5 0.045 13.5 0.1 2.0 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) DMRL_synthase PF00885.19 gi|407465600|ref|YP_006776482.1| - 1.2e-31 109.4 0.3 1.5e-31 109.1 0.3 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase MapZ_EC1 PF18041.1 gi|407465600|ref|YP_006776482.1| - 0.00023 21.4 0.0 0.00033 20.9 0.0 1.2 1 0 0 1 1 1 1 MapZ extracellular domain 1 Metallophos_3 PF14582.6 gi|407465600|ref|YP_006776482.1| - 0.025 13.9 0.0 0.036 13.4 0.0 1.3 1 0 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily DHBP_synthase PF00926.19 gi|407465601|ref|YP_006776483.1| - 2.2e-60 203.5 0.0 2.5e-60 203.3 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PAF-AH_p_II PF03403.13 gi|407465601|ref|YP_006776483.1| - 0.029 12.9 0.0 0.039 12.5 0.0 1.3 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II Lum_binding PF00677.17 gi|407465602|ref|YP_006776484.1| - 6.9e-45 151.0 7.3 5e-25 87.3 0.3 2.0 2 0 0 2 2 2 2 Lumazine binding domain TPR_1 PF00515.28 gi|407465603|ref|YP_006776485.1| - 8.1e-23 79.2 12.7 2.1e-06 27.3 0.0 5.0 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407465603|ref|YP_006776485.1| - 1.4e-16 59.1 3.9 0.0045 17.0 0.0 5.1 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407465603|ref|YP_006776485.1| - 2.3e-12 47.0 1.4 3.9e-05 23.9 0.0 3.7 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407465603|ref|YP_006776485.1| - 9.2e-12 44.2 13.0 0.0053 16.9 0.1 5.6 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|407465603|ref|YP_006776485.1| - 1.4e-10 40.4 1.2 0.13 12.4 0.0 5.3 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_17 PF13431.6 gi|407465603|ref|YP_006776485.1| - 2.7e-10 39.9 6.4 0.00036 20.7 0.0 4.8 5 1 0 5 5 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407465603|ref|YP_006776485.1| - 4e-10 39.6 0.0 0.49 11.3 0.0 5.5 2 1 4 6 6 6 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|407465603|ref|YP_006776485.1| - 1.6e-08 34.1 1.3 0.054 13.4 0.3 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407465603|ref|YP_006776485.1| - 3.5e-08 33.8 1.7 0.00092 19.7 0.1 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|407465603|ref|YP_006776485.1| - 4.8e-08 33.0 0.0 6.2e-05 23.1 0.0 3.7 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|407465603|ref|YP_006776485.1| - 8.7e-07 29.5 0.0 4.6e-06 27.2 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|407465603|ref|YP_006776485.1| - 2.4e-05 24.3 7.5 0.027 14.5 3.3 2.7 2 2 0 2 2 2 2 Putative TPR-like repeat ANAPC3 PF12895.7 gi|407465603|ref|YP_006776485.1| - 3e-05 24.2 7.2 0.0045 17.2 0.5 3.2 1 1 4 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|407465603|ref|YP_006776485.1| - 5e-05 23.7 3.2 2.9 8.7 0.0 5.3 6 0 0 6 6 6 1 Tetratricopeptide repeat DUF4919 PF16266.5 gi|407465603|ref|YP_006776485.1| - 5.1e-05 23.3 4.6 0.23 11.4 0.4 3.1 1 1 2 3 3 3 2 Domain of unknown function (DUF4919) TPR_11 PF13414.6 gi|407465603|ref|YP_006776485.1| - 7.4e-05 22.3 1.8 0.043 13.5 0.0 4.2 2 1 2 4 4 4 1 TPR repeat Fis1_TPR_C PF14853.6 gi|407465603|ref|YP_006776485.1| - 0.00029 20.8 9.2 7.2 6.8 0.0 5.0 2 2 3 5 5 5 0 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.8 gi|407465603|ref|YP_006776485.1| - 0.00055 19.0 2.4 0.00066 18.7 0.6 1.9 1 1 1 2 2 2 1 NMDA receptor-regulated protein 1 DUF3856 PF12968.7 gi|407465603|ref|YP_006776485.1| - 0.0027 17.8 0.0 0.22 11.6 0.0 3.4 1 1 2 4 4 4 1 Domain of Unknown Function (DUF3856) SET PF00856.28 gi|407465603|ref|YP_006776485.1| - 0.0028 18.1 0.1 0.0045 17.4 0.1 1.2 1 0 0 1 1 1 1 SET domain Coatomer_E PF04733.14 gi|407465603|ref|YP_006776485.1| - 0.0043 16.5 3.5 0.65 9.3 0.1 2.2 1 1 1 2 2 2 2 Coatomer epsilon subunit PPTA PF01239.22 gi|407465603|ref|YP_006776485.1| - 0.016 14.9 0.4 0.48 10.2 0.0 2.9 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat Cas_Cas02710 PF09670.10 gi|407465603|ref|YP_006776485.1| - 0.072 11.9 1.8 0.089 11.6 0.9 1.6 2 1 0 2 2 2 0 CRISPR-associated protein (Cas_Cas02710) PknG_TPR PF16918.5 gi|407465603|ref|YP_006776485.1| - 0.17 10.5 0.0 0.24 10.1 0.0 1.3 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat MIT PF04212.18 gi|407465603|ref|YP_006776485.1| - 0.86 9.7 0.1 0.86 9.7 0.1 3.5 4 0 0 4 4 4 0 MIT (microtubule interacting and transport) domain Response_reg PF00072.24 gi|407465604|ref|YP_006776486.1| - 1.4e-19 70.3 0.3 1.7e-19 70.0 0.3 1.1 1 0 0 1 1 1 1 Response regulator receiver domain DUF2608 PF11019.8 gi|407465604|ref|YP_006776486.1| - 0.0044 16.5 0.2 0.026 14.0 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2608) DUF356 PF04009.12 gi|407465604|ref|YP_006776486.1| - 0.0086 16.3 0.2 0.018 15.3 0.1 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF356) TrkA_N PF02254.18 gi|407465604|ref|YP_006776486.1| - 0.042 14.1 0.5 0.2 11.9 0.5 2.5 1 1 0 1 1 1 0 TrkA-N domain DUF43 PF01861.16 gi|407465604|ref|YP_006776486.1| - 0.066 12.4 0.2 0.08 12.2 0.2 1.2 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain 3HCDH_RFF PF18321.1 gi|407465604|ref|YP_006776486.1| - 0.13 12.7 0.0 0.54 10.7 0.0 2.0 2 0 0 2 2 2 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain TrmB PF01978.19 gi|407465605|ref|YP_006776487.1| - 0.012 15.5 0.0 0.024 14.5 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB SAPIS-gp6 PF16722.5 gi|407465605|ref|YP_006776487.1| - 0.058 13.8 1.2 0.47 10.9 0.2 2.5 1 1 0 2 2 2 0 Pathogenicity island protein gp6 in Staphylococcus ADH_zinc_N PF00107.26 gi|407465606|ref|YP_006776488.1| - 4.1e-25 88.2 0.0 7.4e-25 87.4 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|407465606|ref|YP_006776488.1| - 9.6e-23 80.2 0.2 1.6e-22 79.4 0.2 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 gi|407465606|ref|YP_006776488.1| - 4.3e-16 60.2 0.1 6.9e-16 59.5 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ACP_syn_III_C PF08541.10 gi|407465606|ref|YP_006776488.1| - 0.58 10.4 2.5 1.3 9.2 0.2 2.6 4 0 0 4 4 4 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal dsDNA_bind PF01984.20 gi|407465607|ref|YP_006776489.1| - 9.3e-25 87.1 0.7 9.9e-25 87.0 0.7 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain Ribosomal_S19e PF01090.19 gi|407465608|ref|YP_006776490.1| - 9.3e-49 164.6 0.0 1.1e-48 164.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.13 gi|407465608|ref|YP_006776490.1| - 0.027 14.4 0.0 2.4 8.1 0.1 2.4 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain ArsC PF03960.15 gi|407465608|ref|YP_006776490.1| - 0.09 12.8 0.0 0.11 12.5 0.0 1.5 1 1 0 1 1 1 0 ArsC family Cupredoxin_1 PF13473.6 gi|407465609|ref|YP_006776491.1| - 2.2e-10 40.5 0.5 2.6e-10 40.3 0.5 1.2 1 1 0 1 1 1 1 Cupredoxin-like domain Spore_YunB PF09560.10 gi|407465609|ref|YP_006776491.1| - 0.0072 16.3 0.2 0.013 15.5 0.2 1.4 1 0 0 1 1 1 1 Sporulation protein YunB (Spo_YunB) Copper-bind PF00127.20 gi|407465609|ref|YP_006776491.1| - 0.031 14.7 0.4 0.1 13.1 0.4 1.8 1 1 0 1 1 1 0 Copper binding proteins, plastocyanin/azurin family Cu-oxidase_3 PF07732.15 gi|407465609|ref|YP_006776491.1| - 0.054 13.5 0.5 0.093 12.7 0.5 1.4 1 1 0 1 1 1 0 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|407465609|ref|YP_006776491.1| - 0.076 12.8 0.2 1.6 8.4 0.1 2.1 1 1 1 2 2 2 0 Multicopper oxidase Prok-RING_1 PF14446.6 gi|407465610|ref|YP_006776492.1| - 0.00034 20.5 2.6 0.19 11.7 0.2 2.4 2 0 0 2 2 2 2 Prokaryotic RING finger family 1 zf-C2H2 PF00096.26 gi|407465610|ref|YP_006776492.1| - 0.001 19.4 16.3 0.13 12.8 4.0 2.6 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|407465610|ref|YP_006776492.1| - 0.0062 17.3 13.3 0.055 14.3 2.3 2.7 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 gi|407465610|ref|YP_006776492.1| - 0.014 15.8 2.7 0.014 15.8 2.7 3.3 3 1 0 3 3 3 0 Zinc-finger double domain zf-C2H2_3rep PF18868.1 gi|407465610|ref|YP_006776492.1| - 0.015 15.9 6.8 0.15 12.7 6.8 2.0 1 1 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_11 PF16622.5 gi|407465610|ref|YP_006776492.1| - 0.025 14.4 2.9 0.99 9.2 0.2 2.3 2 0 0 2 2 2 0 zinc-finger C2H2-type zinc_ribbon_9 PF14369.6 gi|407465610|ref|YP_006776492.1| - 0.028 14.7 2.6 0.35 11.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon zf-HYPF PF07503.12 gi|407465610|ref|YP_006776492.1| - 0.049 13.4 3.2 0.74 9.6 0.2 2.7 2 1 0 2 2 2 0 HypF finger zf-C2H2_2 PF12756.7 gi|407465610|ref|YP_006776492.1| - 0.065 13.6 4.3 0.065 13.6 4.3 2.2 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) DUF629 PF04780.12 gi|407465610|ref|YP_006776492.1| - 0.097 11.2 16.6 0.3 9.6 4.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF629) zf-CSL PF05207.13 gi|407465610|ref|YP_006776492.1| - 0.16 11.7 2.6 0.27 11.0 1.5 1.8 1 1 1 2 2 2 0 CSL zinc finger Ribosomal_S27e PF01667.17 gi|407465610|ref|YP_006776492.1| - 0.16 11.7 4.0 0.38 10.5 4.0 1.7 1 1 0 1 1 1 0 Ribosomal protein S27 zinc_ribbon_15 PF17032.5 gi|407465610|ref|YP_006776492.1| - 0.17 12.7 6.1 0.12 13.2 3.9 1.7 1 1 1 2 2 2 0 zinc-ribbon family XPA_N PF01286.18 gi|407465610|ref|YP_006776492.1| - 0.17 11.9 5.6 1.9 8.6 0.5 2.3 2 0 0 2 2 2 0 XPA protein N-terminal zf_UBZ PF18439.1 gi|407465610|ref|YP_006776492.1| - 0.18 11.4 8.8 2.8 7.6 3.5 2.6 2 1 0 2 2 2 0 Ubiquitin-Binding Zinc Finger LIM PF00412.22 gi|407465610|ref|YP_006776492.1| - 0.28 11.4 7.7 0.42 10.9 7.7 1.3 1 0 0 1 1 1 0 LIM domain CpXC PF14353.6 gi|407465610|ref|YP_006776492.1| - 0.48 10.5 5.8 4.9 7.2 5.8 2.3 1 1 0 1 1 1 0 CpXC protein FYVE PF01363.21 gi|407465610|ref|YP_006776492.1| - 0.79 9.9 11.9 13 6.0 11.9 2.2 1 1 0 1 1 1 0 FYVE zinc finger DUF983 PF06170.12 gi|407465610|ref|YP_006776492.1| - 0.83 10.1 2.8 20 5.7 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF983) FYDLN_acid PF09538.10 gi|407465610|ref|YP_006776492.1| - 0.88 10.3 8.1 8.9 7.1 8.1 2.0 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) zinc_ribbon_4 PF13717.6 gi|407465610|ref|YP_006776492.1| - 1.1 9.2 6.1 17 5.4 6.1 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|407465610|ref|YP_006776492.1| - 1.9 8.3 8.8 25 4.8 8.8 2.2 1 1 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|407465610|ref|YP_006776492.1| - 2.2 8.5 7.4 4.5 7.5 1.5 2.2 1 1 1 2 2 2 0 Zinc ribbon domain Ribosomal_L31 PF01197.18 gi|407465610|ref|YP_006776492.1| - 2.9 8.2 11.5 1.1 9.6 7.7 2.2 2 1 0 2 2 1 0 Ribosomal protein L31 Cupredoxin_1 PF13473.6 gi|407465611|ref|YP_006776493.1| - 7.3e-09 35.7 0.0 1.1e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 gi|407465611|ref|YP_006776493.1| - 0.0059 17.0 0.2 0.0084 16.5 0.2 1.6 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family EMC3_TMCO1 PF01956.16 gi|407465612|ref|YP_006776494.1| - 7.7e-15 55.0 16.0 2.6e-14 53.3 16.0 1.7 1 1 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like DUF1059 PF06348.11 gi|407465613|ref|YP_006776495.1| - 1.1e-07 32.0 0.1 1.1e-07 32.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) HTH_45 PF14947.6 gi|407465616|ref|YP_006776498.1| - 9.7e-07 28.7 0.9 1.2e-06 28.4 0.9 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix MarR PF01047.22 gi|407465616|ref|YP_006776498.1| - 0.00014 21.7 0.1 0.00021 21.2 0.1 1.2 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|407465616|ref|YP_006776498.1| - 0.028 14.6 0.0 0.034 14.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Dor1 PF04124.12 gi|407465616|ref|YP_006776498.1| - 0.084 11.5 0.0 0.1 11.3 0.0 1.0 1 0 0 1 1 1 0 Dor1-like family AsnC_trans_reg PF01037.21 gi|407465617|ref|YP_006776499.1| - 4.1e-21 74.7 0.3 1.8e-09 37.4 0.0 2.1 2 0 0 2 2 2 2 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|407465617|ref|YP_006776499.1| - 2.8e-06 27.3 1.4 0.00084 19.3 0.3 2.5 2 1 0 2 2 2 2 NapD protein GYD PF08734.11 gi|407465617|ref|YP_006776499.1| - 5e-06 26.4 0.1 0.11 12.4 0.0 2.4 2 1 0 2 2 2 2 GYD domain DUF2129 PF09902.9 gi|407465617|ref|YP_006776499.1| - 0.0012 18.8 0.1 2.8 8.1 0.0 2.9 3 0 0 3 3 3 2 Uncharacterized protein conserved in bacteria (DUF2129) PDZ_2 PF13180.6 gi|407465617|ref|YP_006776499.1| - 0.094 13.1 0.2 18 5.7 0.0 2.2 2 0 0 2 2 2 0 PDZ domain EF1_GNE PF00736.19 gi|407465617|ref|YP_006776499.1| - 0.15 12.3 3.4 2.2 8.5 0.1 2.6 2 1 0 2 2 2 0 EF-1 guanine nucleotide exchange domain Phospholip_B PF04916.13 gi|407465618|ref|YP_006776500.1| - 0.058 12.0 0.1 0.058 12.0 0.1 1.0 1 0 0 1 1 1 0 Phospholipase B Jas PF16135.5 gi|407465620|ref|YP_006776502.1| - 0.072 13.3 2.1 0.092 12.9 2.1 1.2 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling Rpr2 PF04032.16 gi|407465621|ref|YP_006776503.1| - 1.6e-13 50.7 1.0 1.9e-13 50.5 1.0 1.1 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain C1_1 PF00130.22 gi|407465621|ref|YP_006776503.1| - 0.037 13.9 0.7 0.066 13.1 0.7 1.4 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-Sec23_Sec24 PF04810.15 gi|407465621|ref|YP_006776503.1| - 0.095 12.8 2.5 0.42 10.7 2.5 1.9 1 1 0 1 1 1 0 Sec23/Sec24 zinc finger PapD-like PF14874.6 gi|407465621|ref|YP_006776503.1| - 0.15 12.2 0.1 0.26 11.5 0.1 1.4 1 1 0 1 1 1 0 Flagellar-associated PapD-like EMG1 PF03587.14 gi|407465622|ref|YP_006776504.1| - 5.7e-37 127.3 0.2 6.5e-37 127.1 0.2 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase DUF3258 PF11646.8 gi|407465622|ref|YP_006776504.1| - 0.019 15.1 0.3 0.035 14.2 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF3258 Glyco_transf_4 PF13439.6 gi|407465622|ref|YP_006776504.1| - 0.18 11.8 0.1 0.25 11.4 0.1 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glyco_hydro_35 PF01301.19 gi|407465623|ref|YP_006776505.1| - 0.001 18.8 0.1 0.13 11.9 0.0 2.4 2 0 0 2 2 2 2 Glycosyl hydrolases family 35 Glyco_hydro_42 PF02449.15 gi|407465623|ref|YP_006776505.1| - 0.029 13.7 0.0 0.11 11.7 0.0 1.8 2 0 0 2 2 2 0 Beta-galactosidase Ribonuc_red_lgC PF02867.15 gi|407465624|ref|YP_006776506.1| - 1.4e-180 601.3 0.0 2e-180 600.8 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|407465624|ref|YP_006776506.1| - 2.6e-30 104.2 0.0 7.2e-30 102.8 0.0 1.8 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 gi|407465624|ref|YP_006776506.1| - 1e-20 74.1 0.7 3.2e-20 72.5 0.7 1.9 1 0 0 1 1 1 1 ATP cone domain NRDD PF13597.6 gi|407465625|ref|YP_006776507.1| - 2e-28 99.6 0.0 3.7e-27 95.4 0.0 2.2 1 1 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase HTH_20 PF12840.7 gi|407465625|ref|YP_006776507.1| - 5.6e-10 39.1 0.0 1.3e-09 37.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain ATP-cone PF03477.16 gi|407465625|ref|YP_006776507.1| - 2.2e-06 28.1 1.8 8.2e-06 26.3 0.0 2.8 3 0 0 3 3 3 1 ATP cone domain Lig_C PF18330.1 gi|407465625|ref|YP_006776507.1| - 0.014 15.4 0.6 1.3 9.1 0.0 3.3 3 0 0 3 3 3 0 Ligase Pab1020 C-terminal region zf-C3HC4_3 PF13920.6 gi|407465625|ref|YP_006776507.1| - 0.019 14.8 0.3 0.031 14.1 0.3 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) HypA PF01155.19 gi|407465625|ref|YP_006776507.1| - 0.077 13.0 0.4 0.26 11.3 0.1 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TackOD1 PF18551.1 gi|407465625|ref|YP_006776507.1| - 0.22 11.2 2.4 0.19 11.4 0.4 1.8 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 DZR PF12773.7 gi|407465626|ref|YP_006776508.1| - 9.6e-05 22.3 0.4 0.00013 22.0 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon LIM PF00412.22 gi|407465626|ref|YP_006776508.1| - 0.00016 21.8 0.2 0.00019 21.6 0.2 1.1 1 0 0 1 1 1 1 LIM domain zf-ribbon_3 PF13248.6 gi|407465626|ref|YP_006776508.1| - 0.00029 20.1 2.8 0.067 12.6 0.2 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|407465626|ref|YP_006776508.1| - 0.00072 19.2 3.6 0.15 11.8 0.3 2.2 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|407465626|ref|YP_006776508.1| - 0.0021 17.5 1.2 0.27 10.8 0.1 2.2 2 0 0 2 2 2 1 TFIIB zinc-binding HypA PF01155.19 gi|407465626|ref|YP_006776508.1| - 0.0021 18.0 0.1 0.0024 17.9 0.1 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-LITAF-like PF10601.9 gi|407465626|ref|YP_006776508.1| - 0.0025 18.0 2.2 0.31 11.3 0.3 2.2 1 1 1 2 2 2 1 LITAF-like zinc ribbon domain zf_UBZ PF18439.1 gi|407465626|ref|YP_006776508.1| - 0.0025 17.3 1.0 1.2 8.8 0.1 2.2 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger Chordopox_RPO7 PF05864.12 gi|407465626|ref|YP_006776508.1| - 0.0048 17.1 1.9 0.062 13.6 0.5 2.1 1 1 1 2 2 2 2 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) FANCL_C PF11793.8 gi|407465626|ref|YP_006776508.1| - 0.0077 16.4 1.0 0.031 14.5 0.1 1.8 1 1 1 2 2 2 1 FANCL C-terminal domain DUF4428 PF14471.6 gi|407465626|ref|YP_006776508.1| - 0.0079 16.1 3.2 1.3 8.9 0.5 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4428) zf-TFIIB PF13453.6 gi|407465626|ref|YP_006776508.1| - 0.0088 15.4 1.0 0.037 13.4 0.2 2.0 2 0 0 2 2 2 1 Transcription factor zinc-finger zinc_ribbon_4 PF13717.6 gi|407465626|ref|YP_006776508.1| - 0.012 15.5 1.7 1 9.3 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|407465626|ref|YP_006776508.1| - 0.014 15.5 2.3 0.065 13.4 2.3 1.9 1 1 0 1 1 1 0 Zinc ribbon domain zf-C4_Topoisom PF01396.19 gi|407465626|ref|YP_006776508.1| - 0.015 15.1 3.4 0.29 10.9 0.3 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-ACC PF17848.1 gi|407465626|ref|YP_006776508.1| - 0.015 15.4 2.5 0.29 11.2 0.2 2.3 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf-Di19 PF05605.12 gi|407465626|ref|YP_006776508.1| - 0.018 15.3 0.2 0.066 13.5 0.2 1.7 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding YhfH PF14149.6 gi|407465626|ref|YP_006776508.1| - 0.028 14.4 4.8 2.6 8.1 0.1 2.2 2 0 0 2 2 2 0 YhfH-like protein DiS_P_DiS PF06750.13 gi|407465626|ref|YP_006776508.1| - 0.03 14.4 0.9 0.098 12.8 0.9 1.7 1 1 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain zf-ISL3 PF14690.6 gi|407465626|ref|YP_006776508.1| - 0.035 14.8 0.5 5.9 7.6 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zinc-ribbons_6 PF07191.12 gi|407465626|ref|YP_006776508.1| - 0.035 14.1 1.2 0.5 10.4 1.2 2.0 1 1 0 1 1 1 0 zinc-ribbons T4_baseplate PF12322.8 gi|407465626|ref|YP_006776508.1| - 0.049 13.1 1.9 1.5 8.2 0.1 2.0 1 1 1 2 2 2 0 T4 bacteriophage base plate protein zf-DNA_Pol PF08996.10 gi|407465626|ref|YP_006776508.1| - 0.051 13.3 0.7 0.055 13.2 0.7 1.0 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger Zn_Tnp_IS1595 PF12760.7 gi|407465626|ref|YP_006776508.1| - 0.06 13.3 1.2 0.41 10.7 0.0 2.0 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-C3HC4_3 PF13920.6 gi|407465626|ref|YP_006776508.1| - 0.067 13.1 1.3 0.34 10.8 1.3 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Sgf11 PF08209.11 gi|407465626|ref|YP_006776508.1| - 0.074 12.6 0.8 2.5 7.7 0.1 2.1 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-C2HC5 PF06221.13 gi|407465626|ref|YP_006776508.1| - 0.081 12.9 2.8 0.25 11.3 2.8 1.7 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type DUF983 PF06170.12 gi|407465626|ref|YP_006776508.1| - 0.09 13.2 0.2 5.3 7.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF983) zf-C2H2 PF00096.26 gi|407465626|ref|YP_006776508.1| - 0.099 13.1 2.0 5.1 7.8 0.0 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type Rad50_zn_hook PF04423.14 gi|407465626|ref|YP_006776508.1| - 0.11 12.3 1.3 0.12 12.2 0.5 1.6 1 1 1 2 2 2 0 Rad50 zinc hook motif TFIIS_C PF01096.18 gi|407465626|ref|YP_006776508.1| - 0.15 11.9 2.8 5.9 6.8 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Fer2_BFD PF04324.15 gi|407465626|ref|YP_006776508.1| - 0.25 11.7 2.9 5.9 7.3 0.1 2.1 1 1 1 2 2 2 0 BFD-like [2Fe-2S] binding domain OrfB_Zn_ribbon PF07282.11 gi|407465626|ref|YP_006776508.1| - 0.27 11.2 3.1 1 9.3 3.1 1.7 1 1 1 2 2 2 0 Putative transposase DNA-binding domain CpXC PF14353.6 gi|407465626|ref|YP_006776508.1| - 0.28 11.2 2.8 23 5.0 2.8 2.1 1 1 0 1 1 1 0 CpXC protein zf-NADH-PPase PF09297.11 gi|407465626|ref|YP_006776508.1| - 0.41 10.3 4.3 5.9 6.6 0.3 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain ADK_lid PF05191.14 gi|407465626|ref|YP_006776508.1| - 0.67 10.0 5.7 3.6 7.7 5.6 1.9 1 1 1 2 2 2 0 Adenylate kinase, active site lid Rubredoxin_2 PF18073.1 gi|407465626|ref|YP_006776508.1| - 1.2 9.0 5.7 1 9.2 1.1 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain OB_aCoA_assoc PF01796.17 gi|407465627|ref|YP_006776509.1| - 5.3e-08 32.7 0.3 7e-08 32.4 0.3 1.1 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|407465627|ref|YP_006776509.1| - 9.1e-07 28.6 0.6 1.3e-06 28.2 0.6 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_2 PF13240.6 gi|407465627|ref|YP_006776509.1| - 0.0021 17.7 3.4 0.0034 17.0 3.4 1.3 1 0 0 1 1 1 1 zinc-ribbon domain TackOD1 PF18551.1 gi|407465627|ref|YP_006776509.1| - 0.007 16.1 0.8 0.0086 15.8 0.8 1.1 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 PHF5 PF03660.14 gi|407465627|ref|YP_006776509.1| - 0.019 15.2 1.0 0.025 14.8 1.0 1.2 1 0 0 1 1 1 0 PHF5-like protein DZR PF12773.7 gi|407465627|ref|YP_006776509.1| - 0.047 13.7 0.6 0.066 13.2 0.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon Rnf-Nqr PF02508.14 gi|407465627|ref|YP_006776509.1| - 0.079 12.9 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Rnf-Nqr subunit, membrane protein zinc_ribbon_15 PF17032.5 gi|407465627|ref|YP_006776509.1| - 0.11 13.2 2.7 0.15 12.8 2.7 1.2 1 0 0 1 1 1 0 zinc-ribbon family RNHCP PF12647.7 gi|407465627|ref|YP_006776509.1| - 0.18 11.8 2.3 0.24 11.4 0.2 1.9 1 1 1 2 2 2 0 RNHCP domain Rubredoxin_2 PF18073.1 gi|407465627|ref|YP_006776509.1| - 0.5 10.1 3.5 1.3 8.8 3.5 1.7 1 1 0 1 1 1 0 Rubredoxin metal binding domain Zn_ribbon_SprT PF17283.2 gi|407465627|ref|YP_006776509.1| - 3.9 7.5 8.5 35 4.4 8.5 2.1 1 1 0 1 1 1 0 SprT-like zinc ribbon domain Thiolase_N PF00108.23 gi|407465628|ref|YP_006776510.1| - 4.7e-22 78.6 0.1 2e-21 76.6 0.0 2.0 2 1 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|407465628|ref|YP_006776510.1| - 2.3e-12 46.6 0.5 8.7e-10 38.3 0.0 3.4 2 1 1 3 3 3 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|407465628|ref|YP_006776510.1| - 0.00014 21.6 0.2 0.04 13.5 0.1 2.8 3 0 0 3 3 3 2 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|407465628|ref|YP_006776510.1| - 0.024 14.7 0.9 3.5 7.7 0.1 3.4 3 0 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain zf-C4_Topoisom PF01396.19 gi|407465629|ref|YP_006776511.1| - 8.4e-06 25.5 1.6 8.4e-06 25.5 1.6 2.6 2 1 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger Ogr_Delta PF04606.12 gi|407465629|ref|YP_006776511.1| - 0.2 11.6 9.1 2.2 8.3 1.3 3.5 2 2 0 2 2 2 0 Ogr/Delta-like zinc finger Lar_restr_allev PF14354.6 gi|407465629|ref|YP_006776511.1| - 0.3 11.5 5.7 3.9 7.9 0.2 2.2 1 1 1 2 2 2 0 Restriction alleviation protein Lar CN_hydrolase PF00795.22 gi|407465630|ref|YP_006776512.1| - 7e-55 186.2 0.0 7.9e-55 186.0 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase CDC37_M PF08565.11 gi|407465630|ref|YP_006776512.1| - 0.079 12.9 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 Cdc37 Hsp90 binding domain Tautomerase PF01361.21 gi|407465631|ref|YP_006776513.1| - 5.2e-15 55.1 0.0 5.5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_2 PF14552.6 gi|407465631|ref|YP_006776513.1| - 8.1e-07 29.1 0.0 8.4e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_3 PF14832.6 gi|407465631|ref|YP_006776513.1| - 0.026 14.8 0.0 0.027 14.7 0.0 1.0 1 0 0 1 1 1 0 Putative oxalocrotonate tautomerase enzyme Rhomboid PF01694.22 gi|407465632|ref|YP_006776514.1| - 5.8e-34 117.3 20.4 5.8e-34 117.3 20.4 1.5 2 0 0 2 2 2 1 Rhomboid family Cupredoxin_1 PF13473.6 gi|407465637|ref|YP_006776519.1| - 0.0039 17.3 0.1 0.1 12.7 0.0 2.8 2 2 1 3 3 3 1 Cupredoxin-like domain Transgly_assoc PF04226.13 gi|407465638|ref|YP_006776520.1| - 0.026 14.8 0.9 0.047 13.9 0.9 1.4 1 0 0 1 1 1 0 Transglycosylase associated protein CopD PF05425.13 gi|407465639|ref|YP_006776521.1| - 3.7e-14 53.0 2.3 3.7e-14 53.0 2.3 2.7 2 1 0 2 2 2 1 Copper resistance protein D SGL PF08450.12 gi|407465639|ref|YP_006776521.1| - 8.6e-13 48.4 0.3 0.0046 16.6 0.1 5.2 1 1 4 5 5 5 5 SMP-30/Gluconolactonase/LRE-like region CopC PF04234.12 gi|407465639|ref|YP_006776521.1| - 5.4e-09 37.0 0.1 1.4e-08 35.7 0.1 1.7 1 0 0 1 1 1 1 CopC domain Reg_prop PF07494.11 gi|407465639|ref|YP_006776521.1| - 1e-05 25.2 14.4 1.5 9.3 0.0 7.8 8 0 0 8 8 8 1 Two component regulator propeller DUF5074 PF16819.5 gi|407465639|ref|YP_006776521.1| - 0.00012 22.0 1.5 3.4 7.7 0.0 4.4 3 2 1 4 4 4 2 Domain of unknown function (DUF5074) YtkA PF13115.6 gi|407465639|ref|YP_006776521.1| - 0.0038 17.8 0.1 0.066 13.8 0.0 2.4 2 0 0 2 2 2 1 YtkA-like FixH PF05751.11 gi|407465639|ref|YP_006776521.1| - 0.29 11.1 0.8 1.9 8.5 0.0 2.5 3 0 0 3 3 3 0 FixH PPC PF04151.15 gi|407465639|ref|YP_006776521.1| - 0.59 11.3 7.2 0.72 11.0 0.7 3.6 3 0 0 3 3 3 0 Bacterial pre-peptidase C-terminal domain DUF4149 PF13664.6 gi|407465639|ref|YP_006776521.1| - 3 8.2 14.3 0.076 13.3 3.3 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF4149) ABC-3 PF00950.17 gi|407465640|ref|YP_006776522.1| - 5.1e-64 216.3 37.3 6.2e-64 216.0 37.3 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|407465640|ref|YP_006776522.1| - 4e-07 29.4 35.2 9.1e-07 28.2 35.0 1.6 1 1 0 1 1 1 1 FecCD transport family ABC_tran PF00005.27 gi|407465641|ref|YP_006776523.1| - 6.6e-35 120.6 0.0 1.6e-34 119.4 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|407465641|ref|YP_006776523.1| - 3.8e-12 46.6 0.5 5e-06 26.5 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|407465641|ref|YP_006776523.1| - 8.7e-06 25.3 1.2 0.0001 21.9 1.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|407465641|ref|YP_006776523.1| - 0.0015 18.3 0.1 0.0028 17.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|407465641|ref|YP_006776523.1| - 0.0018 18.8 2.6 0.0038 17.7 2.6 1.8 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 gi|407465641|ref|YP_006776523.1| - 0.0044 16.5 0.4 0.05 13.0 0.1 2.1 2 0 0 2 2 2 1 Bacterial TniB protein IstB_IS21 PF01695.17 gi|407465641|ref|YP_006776523.1| - 0.0045 16.7 0.6 2.4 7.9 0.0 2.9 2 1 1 3 3 3 1 IstB-like ATP binding protein SbcCD_C PF13558.6 gi|407465641|ref|YP_006776523.1| - 0.0079 16.4 0.0 0.48 10.7 0.0 2.5 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit NB-ARC PF00931.22 gi|407465641|ref|YP_006776523.1| - 0.0096 15.1 0.0 0.018 14.2 0.0 1.5 1 1 0 1 1 1 1 NB-ARC domain AAA_27 PF13514.6 gi|407465641|ref|YP_006776523.1| - 0.03 13.9 0.0 0.055 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|407465641|ref|YP_006776523.1| - 0.034 14.2 0.2 0.054 13.6 0.2 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|407465641|ref|YP_006776523.1| - 0.037 14.3 0.1 0.11 12.7 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|407465641|ref|YP_006776523.1| - 0.054 13.7 0.1 0.26 11.4 0.1 2.0 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|407465641|ref|YP_006776523.1| - 0.056 13.4 0.1 0.19 11.7 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase AAA PF00004.29 gi|407465641|ref|YP_006776523.1| - 0.077 13.4 1.1 0.86 10.0 1.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|407465641|ref|YP_006776523.1| - 0.085 12.6 0.0 0.12 12.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|407465641|ref|YP_006776523.1| - 0.11 12.5 0.6 1.2 9.1 0.6 2.3 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|407465641|ref|YP_006776523.1| - 0.16 12.3 0.1 0.5 10.7 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain DUF87 PF01935.17 gi|407465641|ref|YP_006776523.1| - 1.2 9.2 5.3 12 5.9 1.0 2.3 1 1 1 2 2 2 0 Helicase HerA, central domain ZnuA PF01297.17 gi|407465642|ref|YP_006776524.1| - 3.2e-70 236.5 1.6 3.7e-70 236.3 1.6 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic NikR_C PF08753.11 gi|407465643|ref|YP_006776525.1| - 1.8e-10 40.8 2.2 2.8e-10 40.2 2.2 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|407465643|ref|YP_006776525.1| - 4.7e-06 26.3 0.1 8e-06 25.6 0.1 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family VapB_antitoxin PF09957.9 gi|407465643|ref|YP_006776525.1| - 0.0066 16.3 0.0 0.014 15.3 0.0 1.6 1 1 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB DUF1381 PF07129.11 gi|407465644|ref|YP_006776526.1| - 0.04 13.8 0.2 0.098 12.5 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) LON_substr_bdg PF02190.16 gi|407465645|ref|YP_006776527.1| - 7.9e-17 61.8 0.1 9.5e-17 61.6 0.1 1.1 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain DUF1002 PF06207.11 gi|407465645|ref|YP_006776527.1| - 0.069 12.7 0.1 0.097 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) SLBP_RNA_bind PF15247.6 gi|407465645|ref|YP_006776527.1| - 0.18 12.0 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain OTCace_N PF02729.21 gi|407465646|ref|YP_006776528.1| - 1e-40 139.2 0.0 1.7e-40 138.4 0.0 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|407465646|ref|YP_006776528.1| - 1.9e-30 106.1 0.0 2.6e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PyrI PF01948.18 gi|407465647|ref|YP_006776529.1| - 4.1e-31 107.1 3.3 5.9e-31 106.6 3.3 1.3 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|407465647|ref|YP_006776529.1| - 3.3e-14 52.5 1.3 3.3e-14 52.5 1.3 1.6 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF1936 PF09151.10 gi|407465647|ref|YP_006776529.1| - 0.03 14.2 0.2 0.059 13.3 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) ATP-synt_C PF00137.21 gi|407465648|ref|YP_006776530.1| - 2.5e-15 56.5 17.4 2.5e-15 56.5 17.4 2.0 2 0 0 2 2 2 1 ATP synthase subunit C ATP-synt_D PF01813.17 gi|407465649|ref|YP_006776531.1| - 1.3e-48 165.4 5.1 1.5e-48 165.3 5.1 1.0 1 0 0 1 1 1 1 ATP synthase subunit D CLU PF13236.6 gi|407465649|ref|YP_006776531.1| - 0.034 14.0 0.0 0.05 13.4 0.0 1.3 1 0 0 1 1 1 0 Clustered mitochondria PerC PF06069.11 gi|407465649|ref|YP_006776531.1| - 0.05 13.9 0.0 0.33 11.2 0.0 2.1 2 0 0 2 2 2 0 PerC transcriptional activator RNA_binding PF01877.17 gi|407465649|ref|YP_006776531.1| - 0.41 10.9 4.4 3.3 8.0 0.6 2.3 2 0 0 2 2 2 0 RNA binding ATP-synt_ab PF00006.25 gi|407465650|ref|YP_006776532.1| - 5.1e-70 235.4 0.0 6.9e-70 235.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|407465650|ref|YP_006776532.1| - 4.2e-12 46.4 2.3 1e-11 45.2 2.3 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|407465650|ref|YP_006776532.1| - 0.00077 19.6 1.2 0.0038 17.3 0.6 2.4 2 0 0 2 2 2 1 HAS barrel domain ATP-synt_ab PF00006.25 gi|407465651|ref|YP_006776533.1| - 7e-93 310.2 0.0 9.4e-93 309.7 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|407465651|ref|YP_006776533.1| - 2.2e-43 147.0 0.0 3.9e-43 146.2 0.0 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|407465651|ref|YP_006776533.1| - 4.3e-14 52.8 0.4 1e-13 51.6 0.4 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA_22 PF13401.6 gi|407465651|ref|YP_006776533.1| - 0.042 14.1 0.2 0.12 12.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain DUF853 PF05872.12 gi|407465651|ref|YP_006776533.1| - 0.11 11.1 0.2 0.18 10.4 0.2 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) vATP-synt_E PF01991.18 gi|407465652|ref|YP_006776534.1| - 3.3e-19 69.1 7.3 8.9e-19 67.7 6.9 1.8 1 1 1 2 2 2 1 ATP synthase (E/31 kDa) subunit Exonuc_VII_L PF02601.15 gi|407465652|ref|YP_006776534.1| - 0.011 15.3 0.8 0.013 15.0 0.8 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Hamartin PF04388.12 gi|407465652|ref|YP_006776534.1| - 0.015 14.0 1.2 0.017 13.8 1.2 1.0 1 0 0 1 1 1 0 Hamartin protein DUF4407 PF14362.6 gi|407465652|ref|YP_006776534.1| - 0.028 13.8 1.9 0.036 13.4 1.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YkyA PF10368.9 gi|407465652|ref|YP_006776534.1| - 0.029 14.0 9.2 0.042 13.5 7.0 2.0 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein TRH PF05438.12 gi|407465652|ref|YP_006776534.1| - 0.032 14.0 1.2 0.044 13.5 1.2 1.2 1 0 0 1 1 1 0 Thyrotropin-releasing hormone (TRH) Peptidase_C50 PF03568.17 gi|407465652|ref|YP_006776534.1| - 0.055 12.6 0.5 0.074 12.2 0.5 1.2 1 0 0 1 1 1 0 Peptidase family C50 ParB PF08775.10 gi|407465652|ref|YP_006776534.1| - 0.15 12.5 3.1 0.21 12.1 2.1 1.8 1 1 1 2 2 2 0 ParB family Imm30 PF15565.6 gi|407465652|ref|YP_006776534.1| - 0.17 12.0 1.0 7.4 6.7 0.1 2.7 3 0 0 3 3 3 0 Immunity protein 30 ATP-synt_B PF00430.18 gi|407465652|ref|YP_006776534.1| - 0.32 11.1 3.7 0.54 10.3 3.7 1.3 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) DUF4164 PF13747.6 gi|407465652|ref|YP_006776534.1| - 0.65 10.3 4.7 0.88 9.9 1.1 2.8 3 1 1 4 4 4 0 Domain of unknown function (DUF4164) V_ATPase_I PF01496.19 gi|407465653|ref|YP_006776535.1| - 2.8e-25 88.5 18.7 1.5e-21 76.1 0.1 3.2 3 0 0 3 3 3 3 V-type ATPase 116kDa subunit family RasGEF_N_2 PF14663.6 gi|407465653|ref|YP_006776535.1| - 0.08 13.4 0.1 0.76 10.2 0.0 2.5 2 1 0 2 2 2 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Med11 PF10280.9 gi|407465653|ref|YP_006776535.1| - 0.098 13.1 1.1 2.3 8.7 0.5 2.3 1 1 1 2 2 2 0 Mediator complex protein CCDC-167 PF15188.6 gi|407465653|ref|YP_006776535.1| - 0.67 10.3 8.2 4.4 7.7 1.6 3.1 4 0 0 4 4 4 0 Coiled-coil domain-containing protein 167 Laminin_II PF06009.12 gi|407465653|ref|YP_006776535.1| - 1.3 9.1 4.2 6 6.9 0.3 2.6 2 0 0 2 2 2 0 Laminin Domain II DHR10 PF18595.1 gi|407465653|ref|YP_006776535.1| - 2.5 8.2 6.3 0.38 10.8 2.0 1.8 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain HHH_9 PF17674.1 gi|407465653|ref|YP_006776535.1| - 2.7 8.9 4.5 1.8 9.5 0.6 2.5 3 0 0 3 3 3 0 HHH domain Usp PF00582.26 gi|407465655|ref|YP_006776537.1| - 2.1e-06 28.3 0.0 2.3e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family DUF711 PF05167.12 gi|407465655|ref|YP_006776537.1| - 0.1 11.5 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised ACR (DUF711) Rhodanese PF00581.20 gi|407465656|ref|YP_006776538.1| - 2.3e-39 134.2 0.1 4.1e-20 72.3 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain Ammonium_transp PF00909.21 gi|407465658|ref|YP_006776540.1| - 7.1e-110 367.4 35.5 1.5e-109 366.3 35.5 1.5 1 1 0 1 1 1 1 Ammonium Transporter Family SAM_2 PF07647.17 gi|407465659|ref|YP_006776541.1| - 0.059 13.5 0.1 0.14 12.3 0.1 1.6 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) vATP-synt_AC39 PF01992.16 gi|407465660|ref|YP_006776542.1| - 1.1e-54 186.2 7.9 1.4e-54 185.8 7.9 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit MerR-DNA-bind PF09278.11 gi|407465660|ref|YP_006776542.1| - 0.086 13.4 0.0 0.99 10.0 0.0 2.7 3 0 0 3 3 3 0 MerR, DNA binding Cas_Cas4 PF01930.17 gi|407465662|ref|YP_006776544.1| - 4.5e-05 23.6 0.7 0.0001 22.4 0.7 1.7 1 1 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|407465662|ref|YP_006776544.1| - 0.011 15.7 0.9 2.1 8.2 0.1 2.1 2 0 0 2 2 2 0 PD-(D/E)XK nuclease superfamily RicinB_lectin_2 PF14200.6 gi|407465663|ref|YP_006776545.1| - 0.069 13.9 0.1 0.13 13.0 0.1 1.4 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin domain-like AA_kinase PF00696.28 gi|407465665|ref|YP_006776547.1| - 3.8e-30 105.3 1.3 5.6e-30 104.7 1.3 1.3 1 0 0 1 1 1 1 Amino acid kinase family DUF5567 PF17722.1 gi|407465665|ref|YP_006776547.1| - 0.055 13.3 0.0 0.12 12.2 0.0 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5567) HD PF01966.22 gi|407465666|ref|YP_006776548.1| - 1.2e-16 61.0 0.2 3e-16 59.8 0.2 1.7 1 0 0 1 1 1 1 HD domain Thymidylate_kin PF02223.17 gi|407465667|ref|YP_006776549.1| - 3.4e-35 121.4 0.2 3.8e-35 121.2 0.2 1.0 1 0 0 1 1 1 1 Thymidylate kinase HSP20 PF00011.21 gi|407465668|ref|YP_006776550.1| - 1.1e-10 41.6 0.1 1.3e-10 41.3 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|407465668|ref|YP_006776550.1| - 1.5e-07 30.9 0.1 3.4e-07 29.7 0.1 1.6 1 0 0 1 1 1 1 HSP20-like domain found in ArsA ABC1 PF03109.16 gi|407465669|ref|YP_006776551.1| - 2.3e-24 85.8 0.2 1.3e-23 83.4 0.0 2.2 2 0 0 2 2 2 1 ABC1 family Pkinase PF00069.25 gi|407465669|ref|YP_006776551.1| - 0.0046 16.4 0.4 0.0098 15.3 0.4 1.5 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|407465669|ref|YP_006776551.1| - 0.014 15.4 0.0 0.085 12.8 0.0 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family DUF1282 PF06930.12 gi|407465670|ref|YP_006776552.1| - 0.033 14.0 0.0 0.041 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1282) Phage_holin_2_3 PF16080.5 gi|407465671|ref|YP_006776553.1| - 0.00028 20.6 1.7 0.0004 20.1 0.2 1.9 1 1 1 2 2 2 1 Bacteriophage holin family HP1 DUF4229 PF14012.6 gi|407465671|ref|YP_006776553.1| - 0.00046 20.2 0.1 0.00057 19.9 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4229) Fig1 PF12351.8 gi|407465671|ref|YP_006776553.1| - 0.024 14.6 0.6 0.029 14.3 0.6 1.0 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 E1-E2_ATPase PF00122.20 gi|407465671|ref|YP_006776553.1| - 0.078 12.5 0.9 0.089 12.3 0.9 1.1 1 0 0 1 1 1 0 E1-E2 ATPase CrgA PF06781.12 gi|407465671|ref|YP_006776553.1| - 0.17 11.9 2.9 0.21 11.6 2.9 1.1 1 0 0 1 1 1 0 Cell division protein CrgA Pox_A14 PF05767.12 gi|407465671|ref|YP_006776553.1| - 0.87 9.8 5.2 4.3 7.6 0.3 2.0 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 IATP PF04568.12 gi|407465672|ref|YP_006776554.1| - 0.00012 22.4 0.9 0.00018 21.9 0.9 1.3 1 0 0 1 1 1 1 Mitochondrial ATPase inhibitor, IATP FapA PF03961.13 gi|407465672|ref|YP_006776554.1| - 0.0066 15.1 6.1 0.0081 14.8 6.1 1.1 1 0 0 1 1 1 1 Flagellar Assembly Protein A Lipoprotein_7 PF01540.16 gi|407465672|ref|YP_006776554.1| - 0.01 15.1 4.0 0.012 14.9 4.0 1.0 1 0 0 1 1 1 0 Adhesin lipoprotein Spc7 PF08317.11 gi|407465672|ref|YP_006776554.1| - 0.011 14.6 11.6 0.014 14.3 11.6 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein TipAS PF07739.13 gi|407465672|ref|YP_006776554.1| - 0.013 16.1 1.9 0.015 15.8 1.9 1.1 1 0 0 1 1 1 0 TipAS antibiotic-recognition domain Allexi_40kDa PF05549.11 gi|407465672|ref|YP_006776554.1| - 0.014 15.0 3.0 0.015 14.8 3.0 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF1043 PF06295.12 gi|407465672|ref|YP_006776554.1| - 0.016 15.2 4.8 0.097 12.7 4.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) Syntaxin-6_N PF09177.11 gi|407465672|ref|YP_006776554.1| - 0.018 15.6 3.5 0.026 15.1 3.5 1.3 1 0 0 1 1 1 0 Syntaxin 6, N-terminal DUF3958 PF13125.6 gi|407465672|ref|YP_006776554.1| - 0.029 14.6 7.6 0.038 14.2 7.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) DUF1917 PF08939.10 gi|407465672|ref|YP_006776554.1| - 0.03 14.2 3.3 0.035 14.0 3.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1917) ALMT PF11744.8 gi|407465672|ref|YP_006776554.1| - 0.036 12.9 2.0 0.038 12.8 2.0 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Gastrin PF00918.17 gi|407465672|ref|YP_006776554.1| - 0.039 14.9 0.2 0.054 14.5 0.2 1.3 1 0 0 1 1 1 0 Gastrin/cholecystokinin family Mrpl_C PF18502.1 gi|407465672|ref|YP_006776554.1| - 0.047 14.0 3.7 0.06 13.6 3.7 1.2 1 0 0 1 1 1 0 54S ribosomal protein L8 C-terminal domain FUN14 PF04930.15 gi|407465672|ref|YP_006776554.1| - 0.048 14.1 1.1 0.068 13.6 1.1 1.4 1 1 0 1 1 1 0 FUN14 family XhlA PF10779.9 gi|407465672|ref|YP_006776554.1| - 0.054 13.7 12.2 0.36 11.0 2.3 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Ax_dynein_light PF10211.9 gi|407465672|ref|YP_006776554.1| - 0.056 13.4 10.3 0.067 13.1 10.3 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain DUF1664 PF07889.12 gi|407465672|ref|YP_006776554.1| - 0.056 13.5 5.0 0.073 13.1 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) HSCB_C PF07743.13 gi|407465672|ref|YP_006776554.1| - 0.068 13.7 9.7 0.5 10.9 4.3 2.2 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain HAUS-augmin3 PF14932.6 gi|407465672|ref|YP_006776554.1| - 0.082 12.5 7.3 0.099 12.2 7.3 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Prominin PF05478.11 gi|407465672|ref|YP_006776554.1| - 0.12 10.3 4.6 0.13 10.2 4.6 1.1 1 0 0 1 1 1 0 Prominin DUF3040 PF11239.8 gi|407465672|ref|YP_006776554.1| - 0.13 12.5 2.1 2.1 8.7 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) Sulfatase_C PF14707.6 gi|407465672|ref|YP_006776554.1| - 0.15 12.8 1.0 0.18 12.6 1.0 1.1 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase Activator-TraM PF11657.8 gi|407465672|ref|YP_006776554.1| - 0.2 11.5 3.7 0.61 9.9 3.7 1.8 1 1 0 1 1 1 0 Transcriptional activator TraM FPN1 PF06963.12 gi|407465672|ref|YP_006776554.1| - 0.2 10.2 0.2 0.21 10.1 0.2 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) End3 PF12761.7 gi|407465672|ref|YP_006776554.1| - 0.22 11.7 8.9 0.26 11.5 8.9 1.1 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 TMPIT PF07851.13 gi|407465672|ref|YP_006776554.1| - 0.23 10.7 7.4 0.27 10.5 7.4 1.1 1 0 0 1 1 1 0 TMPIT-like protein SMBP PF16785.5 gi|407465672|ref|YP_006776554.1| - 0.36 11.1 2.5 0.45 10.7 2.5 1.4 1 1 0 1 1 1 0 Small metal-binding protein KxDL PF10241.9 gi|407465672|ref|YP_006776554.1| - 0.41 11.0 8.5 7.3 7.0 8.5 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein Peptidase_M3_N PF08439.10 gi|407465672|ref|YP_006776554.1| - 0.48 10.7 6.3 0.86 9.9 2.8 2.3 1 1 1 2 2 2 0 Oligopeptidase F DUF4635 PF15466.6 gi|407465672|ref|YP_006776554.1| - 0.52 9.8 6.2 0.76 9.3 6.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4635) DUF2203 PF09969.9 gi|407465672|ref|YP_006776554.1| - 0.74 10.6 4.6 0.95 10.2 4.6 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) TssO PF17561.2 gi|407465672|ref|YP_006776554.1| - 0.83 9.8 11.8 3.4 7.8 11.8 2.0 1 1 0 1 1 1 0 Type VI secretion system, TssO DUF4065 PF13274.6 gi|407465672|ref|YP_006776554.1| - 0.98 10.3 5.9 1.3 9.9 5.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4065) YojJ PF10372.9 gi|407465672|ref|YP_006776554.1| - 1.1 9.4 9.3 2.3 8.4 1.2 2.6 1 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus CCDC-167 PF15188.6 gi|407465672|ref|YP_006776554.1| - 1.2 9.6 10.9 2.2 8.7 10.9 1.5 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 SlyX PF04102.12 gi|407465672|ref|YP_006776554.1| - 1.3 9.7 8.9 0.84 10.3 5.7 1.9 1 1 1 2 2 2 0 SlyX DUF3450 PF11932.8 gi|407465672|ref|YP_006776554.1| - 1.4 8.1 11.1 6.8 5.9 11.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) DUF948 PF06103.11 gi|407465672|ref|YP_006776554.1| - 1.7 9.0 6.9 10 6.5 6.6 2.2 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) UPF0242 PF06785.11 gi|407465672|ref|YP_006776554.1| - 9.8 6.2 15.5 10 6.2 14.5 1.3 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus NPCBM_assoc PF10633.9 gi|407465673|ref|YP_006776555.1| - 0.00049 20.3 0.5 1.4 9.2 0.0 3.9 3 2 1 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase FeoB_associated PF12669.7 gi|407465673|ref|YP_006776555.1| - 0.99 9.9 2.3 1.8 9.0 2.3 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein ABC_tran PF00005.27 gi|407465674|ref|YP_006776556.1| - 1.1e-19 71.4 0.0 1.5e-19 70.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|407465674|ref|YP_006776556.1| - 9.7e-06 25.2 0.2 1.3e-05 24.8 0.2 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_13 PF13166.6 gi|407465674|ref|YP_006776556.1| - 0.014 14.1 0.1 0.02 13.6 0.1 1.1 1 0 0 1 1 1 0 AAA domain Effector_1 PF04518.12 gi|407465674|ref|YP_006776556.1| - 0.067 12.3 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 Effector from type III secretion system MacB_PCD PF12704.7 gi|407465675|ref|YP_006776557.1| - 5.3e-16 59.6 2.3 9e-16 58.8 2.3 1.3 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|407465675|ref|YP_006776557.1| - 1.4e-14 54.3 1.3 1.4e-14 54.3 1.3 2.2 3 0 0 3 3 3 1 FtsX-like permease family HTH_24 PF13412.6 gi|407465676|ref|YP_006776558.1| - 5.2e-19 67.5 7.2 2.9e-09 36.3 0.9 2.8 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|407465676|ref|YP_006776558.1| - 3.1e-18 65.3 1.2 4.7e-10 39.1 0.4 2.3 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 gi|407465676|ref|YP_006776558.1| - 1.1e-05 25.2 0.0 0.089 12.7 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_11 PF08279.12 gi|407465676|ref|YP_006776558.1| - 2e-05 24.4 0.3 0.016 15.2 0.1 2.8 2 0 0 2 2 2 1 HTH domain MarR PF01047.22 gi|407465676|ref|YP_006776558.1| - 8.7e-05 22.4 3.3 0.0026 17.6 0.4 3.0 3 0 0 3 3 3 1 MarR family TrmB PF01978.19 gi|407465676|ref|YP_006776558.1| - 0.0002 21.1 0.0 0.086 12.7 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 gi|407465676|ref|YP_006776558.1| - 0.00052 19.7 0.1 0.97 9.3 0.1 2.4 2 0 0 2 2 2 2 Homeodomain-like domain GerE PF00196.19 gi|407465676|ref|YP_006776558.1| - 0.00054 19.4 0.8 0.2 11.2 0.3 3.0 3 0 0 3 3 3 1 Bacterial regulatory proteins, luxR family HTH_Mga PF08280.11 gi|407465676|ref|YP_006776558.1| - 0.0015 18.5 7.2 0.09 12.8 3.2 3.5 3 0 0 3 3 3 1 M protein trans-acting positive regulator (MGA) HTH domain Mga PF05043.13 gi|407465676|ref|YP_006776558.1| - 0.0016 19.0 0.7 0.058 14.0 0.2 2.8 3 0 0 3 3 3 1 Mga helix-turn-helix domain HTH_5 PF01022.20 gi|407465676|ref|YP_006776558.1| - 0.0023 17.8 0.1 0.013 15.4 0.1 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Trp_repressor PF01371.19 gi|407465676|ref|YP_006776558.1| - 0.0038 17.3 1.1 0.012 15.7 0.2 2.3 3 0 0 3 3 2 1 Trp repressor protein HTH_40 PF14493.6 gi|407465676|ref|YP_006776558.1| - 0.013 15.9 2.1 0.021 15.2 0.2 2.3 3 0 0 3 3 2 0 Helix-turn-helix domain DUF5089 PF17002.5 gi|407465676|ref|YP_006776558.1| - 0.038 13.9 2.2 0.69 9.8 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5089) HTH_29 PF13551.6 gi|407465676|ref|YP_006776558.1| - 0.082 12.9 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_27 PF13463.6 gi|407465676|ref|YP_006776558.1| - 0.099 13.2 0.2 0.43 11.1 0.1 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_DeoR PF08220.12 gi|407465676|ref|YP_006776558.1| - 0.14 11.9 0.2 0.66 9.8 0.2 2.1 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_36 PF13730.6 gi|407465676|ref|YP_006776558.1| - 0.15 12.0 0.1 0.38 10.7 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Rnk_N PF14760.6 gi|407465676|ref|YP_006776558.1| - 0.24 11.9 0.7 25 5.4 0.1 2.4 2 0 0 2 2 2 0 Rnk N-terminus Sigma70_r4 PF04545.16 gi|407465676|ref|YP_006776558.1| - 0.27 10.8 1.2 0.8 9.3 0.1 2.4 3 0 0 3 3 2 0 Sigma-70, region 4 RuvB_C PF05491.13 gi|407465676|ref|YP_006776558.1| - 0.35 10.8 3.7 0.32 10.9 0.3 2.7 3 1 0 3 3 3 0 RuvB C-terminal winged helix domain Med9 PF07544.13 gi|407465676|ref|YP_006776558.1| - 0.51 10.5 4.0 1.2 9.3 0.9 2.7 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Syntaxin_2 PF14523.6 gi|407465676|ref|YP_006776558.1| - 2.9 8.3 7.1 3.2 8.2 1.0 3.0 2 1 1 3 3 3 0 Syntaxin-like protein Cullin_Nedd8 PF10557.9 gi|407465676|ref|YP_006776558.1| - 7 6.8 8.7 0.29 11.2 0.6 2.9 4 0 0 4 4 3 0 Cullin protein neddylation domain AF0941-like PF14591.6 gi|407465678|ref|YP_006776560.1| - 0.0038 17.8 0.0 0.0042 17.6 0.0 1.1 1 0 0 1 1 1 1 AF0941-like NUDIX PF00293.28 gi|407465678|ref|YP_006776560.1| - 0.02 15.0 0.0 0.022 14.8 0.0 1.1 1 0 0 1 1 1 0 NUDIX domain PhoU PF01895.19 gi|407465679|ref|YP_006776561.1| - 8.1e-10 39.0 4.2 5.4e-07 30.0 1.2 2.6 2 0 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 gi|407465679|ref|YP_006776561.1| - 0.00066 19.5 0.0 0.0014 18.5 0.0 1.6 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin GHMP_kinases_N PF00288.26 gi|407465680|ref|YP_006776562.1| - 9.4e-13 48.2 0.5 1.8e-12 47.3 0.5 1.4 1 0 0 1 1 1 1 GHMP kinases N terminal domain ACT_7 PF13840.6 gi|407465680|ref|YP_006776562.1| - 0.15 11.9 0.0 0.39 10.6 0.0 1.7 1 0 0 1 1 1 0 ACT domain PPS_PS PF02006.16 gi|407465681|ref|YP_006776563.1| - 6.1e-71 237.6 5.2 7.9e-71 237.2 5.2 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase HicB_lk_antitox PF15919.5 gi|407465681|ref|YP_006776563.1| - 0.033 14.3 0.1 0.062 13.4 0.1 1.5 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system Diphtheria_R PF01324.19 gi|407465681|ref|YP_006776563.1| - 0.048 13.3 0.0 0.087 12.5 0.0 1.4 1 0 0 1 1 1 0 Diphtheria toxin, R domain Pantoate_transf PF02548.15 gi|407465682|ref|YP_006776564.1| - 2e-103 345.3 1.4 2.3e-103 345.1 1.4 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.6 gi|407465682|ref|YP_006776564.1| - 0.0041 16.6 0.3 0.024 14.1 0.1 2.2 1 1 2 3 3 3 2 Phosphoenolpyruvate phosphomutase DFP PF04127.15 gi|407465683|ref|YP_006776565.1| - 5.1e-59 199.2 3.0 1.3e-56 191.4 1.4 2.3 2 0 0 2 2 2 2 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|407465683|ref|YP_006776565.1| - 1.4e-36 125.7 1.1 8.2e-36 123.1 0.1 2.5 3 0 0 3 3 3 1 Flavoprotein NAD_binding_7 PF13241.6 gi|407465683|ref|YP_006776565.1| - 0.00073 19.9 0.3 0.98 9.9 0.0 2.8 2 0 0 2 2 2 2 Putative NAD(P)-binding NAD_binding_10 PF13460.6 gi|407465683|ref|YP_006776565.1| - 0.01 15.7 0.0 0.021 14.7 0.0 1.6 1 0 0 1 1 1 0 NAD(P)H-binding YjeF_N PF03853.15 gi|407465683|ref|YP_006776565.1| - 0.021 14.7 0.0 0.76 9.7 0.0 2.4 2 0 0 2 2 2 0 YjeF-related protein N-terminus Shikimate_DH PF01488.20 gi|407465683|ref|YP_006776565.1| - 0.042 13.9 2.0 0.11 12.5 0.1 2.5 2 1 1 3 3 3 0 Shikimate / quinate 5-dehydrogenase BRCT PF00533.26 gi|407465683|ref|YP_006776565.1| - 0.065 13.6 0.3 2.1 8.8 0.0 3.0 3 0 0 3 3 3 0 BRCA1 C Terminus (BRCT) domain Methyltransf_31 PF13847.6 gi|407465684|ref|YP_006776566.1| - 3.1e-18 66.0 0.0 3.9e-18 65.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407465684|ref|YP_006776566.1| - 6.8e-18 65.2 0.0 1.6e-17 64.0 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|407465684|ref|YP_006776566.1| - 5.4e-17 62.2 0.0 1.1e-16 61.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|407465684|ref|YP_006776566.1| - 2.2e-16 59.9 0.2 9.9e-16 57.8 0.1 1.8 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|407465684|ref|YP_006776566.1| - 6.4e-12 45.6 0.0 8.9e-12 45.1 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|407465684|ref|YP_006776566.1| - 4e-11 43.5 0.0 7.3e-11 42.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|407465684|ref|YP_006776566.1| - 1.8e-06 27.9 0.0 4.4e-06 26.6 0.0 1.6 1 1 1 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 gi|407465684|ref|YP_006776566.1| - 3.6e-06 26.6 0.1 7.7e-06 25.6 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|407465684|ref|YP_006776566.1| - 4e-05 23.3 0.0 5.8e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.20 gi|407465684|ref|YP_006776566.1| - 6.7e-05 22.3 0.0 9.4e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase RrnaAD PF00398.20 gi|407465684|ref|YP_006776566.1| - 6.9e-05 22.0 0.1 0.00012 21.3 0.1 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase CheR PF01739.18 gi|407465684|ref|YP_006776566.1| - 0.00019 21.0 0.1 0.0026 17.3 0.0 2.5 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain Methyltransf_5 PF01795.19 gi|407465684|ref|YP_006776566.1| - 0.0014 18.2 0.2 0.063 12.8 0.0 2.7 3 0 0 3 3 3 1 MraW methylase family MetW PF07021.12 gi|407465684|ref|YP_006776566.1| - 0.0038 16.9 0.0 0.0057 16.3 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Fibrillarin PF01269.17 gi|407465684|ref|YP_006776566.1| - 0.0076 15.4 0.0 0.012 14.7 0.0 1.4 1 0 0 1 1 1 1 Fibrillarin Methyltransf_32 PF13679.6 gi|407465684|ref|YP_006776566.1| - 0.02 14.9 0.0 0.038 14.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|407465684|ref|YP_006776566.1| - 0.034 13.5 0.0 0.049 13.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) FtsJ PF01728.19 gi|407465684|ref|YP_006776566.1| - 0.065 13.3 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 FtsJ-like methyltransferase Asparaginase_2 PF01112.18 gi|407465684|ref|YP_006776566.1| - 0.083 11.9 0.0 0.13 11.2 0.0 1.3 1 0 0 1 1 1 0 Asparaginase GCD14 PF08704.10 gi|407465684|ref|YP_006776566.1| - 0.12 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit CarD_CdnL_TRCF PF02559.16 gi|407465684|ref|YP_006776566.1| - 0.12 13.1 1.5 5.1 7.9 0.0 2.6 2 1 0 2 2 2 0 CarD-like/TRCF domain Methyltr_RsmB-F PF01189.17 gi|407465684|ref|YP_006776566.1| - 0.13 11.9 0.0 0.35 10.5 0.0 1.7 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F DUF5613 PF18467.1 gi|407465684|ref|YP_006776566.1| - 0.22 12.0 3.0 3.2 8.2 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5613) YebF PF13995.6 gi|407465685|ref|YP_006776567.1| - 0.011 15.7 0.1 0.022 14.8 0.1 1.5 1 0 0 1 1 1 0 YebF-like protein Peptidase_M24 PF00557.24 gi|407465686|ref|YP_006776568.1| - 9.7e-56 188.8 0.0 1.2e-55 188.4 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|407465686|ref|YP_006776568.1| - 1.5e-14 54.8 0.0 2.4e-14 54.1 0.0 1.3 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain DrrA_P4M PF14860.6 gi|407465686|ref|YP_006776568.1| - 0.26 11.1 2.3 2.5 8.0 0.3 2.5 2 1 0 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain MSP7_C PF12948.7 gi|407465686|ref|YP_006776568.1| - 2.2 8.9 6.2 4.2 8.1 2.1 2.3 2 0 0 2 2 2 0 MSP7-like protein C-terminal domain NFACT-R_2 PF18297.1 gi|407465687|ref|YP_006776569.1| - 1.9e-22 79.4 0.0 3.5e-22 78.6 0.0 1.5 1 0 0 1 1 1 1 NFACT protein RNA binding domain ThiI PF02568.14 gi|407465687|ref|YP_006776569.1| - 6.8e-13 48.7 0.0 1.7e-12 47.4 0.0 1.6 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|407465687|ref|YP_006776569.1| - 1.5e-08 33.9 0.0 3.4e-08 32.7 0.0 1.5 2 0 0 2 2 2 1 tRNA methyl transferase QueC PF06508.13 gi|407465687|ref|YP_006776569.1| - 0.015 14.8 0.1 0.035 13.6 0.1 1.6 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|407465687|ref|YP_006776569.1| - 0.087 12.5 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase SepF PF04472.12 gi|407465688|ref|YP_006776570.1| - 5e-12 45.9 0.8 5.6e-12 45.8 0.8 1.0 1 0 0 1 1 1 1 Cell division protein SepF SporV_AA PF12164.8 gi|407465688|ref|YP_006776570.1| - 0.026 14.9 0.7 0.037 14.4 0.7 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AA Herpes_IE68 PF02479.16 gi|407465688|ref|YP_006776570.1| - 0.029 14.0 0.0 0.032 13.9 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus immediate early protein H_kinase_N PF12282.8 gi|407465688|ref|YP_006776570.1| - 0.088 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Signal transduction histidine kinase Beta-Casp PF10996.8 gi|407465689|ref|YP_006776571.1| - 1.6e-23 83.1 0.0 2.9e-23 82.3 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain KH_7 PF17214.3 gi|407465689|ref|YP_006776571.1| - 4.9e-22 77.7 0.6 3.4e-21 75.0 0.7 2.4 2 0 0 2 2 2 1 KH domain RMMBL PF07521.12 gi|407465689|ref|YP_006776571.1| - 2.8e-16 59.2 0.0 6.1e-16 58.1 0.0 1.6 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|407465689|ref|YP_006776571.1| - 2.5e-13 49.9 0.0 5.5e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|407465689|ref|YP_006776571.1| - 4.6e-12 46.4 0.1 6.7e-11 42.6 0.1 2.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|407465689|ref|YP_006776571.1| - 1.7e-10 40.7 0.0 6e-10 39.0 0.0 1.9 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|407465689|ref|YP_006776571.1| - 0.044 13.7 0.0 0.15 12.0 0.0 1.9 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Proteasome PF00227.26 gi|407465690|ref|YP_006776572.1| - 2.3e-51 174.0 0.3 2.6e-51 173.8 0.3 1.0 1 0 0 1 1 1 1 Proteasome subunit Fe-ADH_2 PF13685.6 gi|407465691|ref|YP_006776573.1| - 1.6e-71 240.9 1.0 2.1e-71 240.6 1.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|407465691|ref|YP_006776573.1| - 2.7e-22 79.1 0.4 9.7e-21 74.0 0.4 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|407465691|ref|YP_006776573.1| - 2.3e-05 23.7 0.4 0.00042 19.6 0.2 2.5 1 1 0 1 1 1 1 3-dehydroquinate synthase DUF1887 PF09002.11 gi|407465691|ref|YP_006776573.1| - 0.038 12.7 0.0 0.076 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) ATP-synt_ab_C PF00306.27 gi|407465691|ref|YP_006776573.1| - 0.044 14.1 0.2 0.094 13.1 0.2 1.5 1 0 0 1 1 1 0 ATP synthase alpha/beta chain, C terminal domain AIRC PF00731.20 gi|407465691|ref|YP_006776573.1| - 0.085 12.4 0.6 0.42 10.2 0.1 2.2 2 0 0 2 2 2 0 AIR carboxylase FKBP26_C PF18046.1 gi|407465692|ref|YP_006776574.1| - 5.5e-13 48.8 0.7 1.8e-12 47.2 0.7 1.8 1 0 0 1 1 1 1 FKBP26_C-terminal FKBP_C PF00254.28 gi|407465692|ref|YP_006776574.1| - 4e-11 43.1 0.1 2.2e-10 40.7 0.1 2.1 1 1 1 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase CAP_GLY PF01302.25 gi|407465692|ref|YP_006776574.1| - 0.01 15.9 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 CAP-Gly domain Aminotran_5 PF00266.19 gi|407465693|ref|YP_006776575.1| - 1.1e-37 129.9 0.0 1.4e-37 129.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|407465693|ref|YP_006776575.1| - 0.00044 18.9 0.3 0.0007 18.2 0.3 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Fiji_64_capsid PF05880.11 gi|407465693|ref|YP_006776575.1| - 0.051 12.2 0.0 0.07 11.7 0.0 1.1 1 0 0 1 1 1 0 Fijivirus 64 kDa capsid protein CTP_transf_like PF01467.26 gi|407465694|ref|YP_006776576.1| - 1e-13 51.7 0.1 6.7e-13 49.1 0.1 1.9 1 1 0 1 1 1 1 Cytidylyltransferase-like HIGH_NTase1 PF05636.11 gi|407465694|ref|YP_006776576.1| - 0.13 11.4 0.0 11 5.1 0.0 2.2 2 0 0 2 2 2 0 HIGH Nucleotidyl Transferase RTC PF01137.21 gi|407465695|ref|YP_006776577.1| - 1.4e-74 250.1 0.0 1.6e-74 249.9 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase CopD PF05425.13 gi|407465696|ref|YP_006776578.1| - 2.5e-14 53.6 0.5 2.5e-14 53.6 0.5 1.4 2 0 0 2 2 2 1 Copper resistance protein D DUF2269 PF10027.9 gi|407465696|ref|YP_006776578.1| - 0.00026 21.1 6.1 0.00034 20.7 6.1 1.1 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2269) UPF0093 PF03653.13 gi|407465696|ref|YP_006776578.1| - 0.00069 19.9 9.2 0.0016 18.6 9.2 1.5 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0093) 7TM_GPCR_Srv PF10323.9 gi|407465696|ref|YP_006776578.1| - 0.01 15.2 2.9 0.01 15.2 2.9 1.8 1 1 1 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srv DUF4149 PF13664.6 gi|407465696|ref|YP_006776578.1| - 0.02 15.2 2.9 0.02 15.2 2.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4149) Urate_ox_N PF06181.11 gi|407465696|ref|YP_006776578.1| - 0.038 13.3 0.3 0.038 13.3 0.3 1.9 2 0 0 2 2 2 0 Urate oxidase N-terminal PEMT PF04191.13 gi|407465696|ref|YP_006776578.1| - 0.078 13.4 0.2 0.078 13.4 0.2 2.1 3 0 0 3 3 3 0 Phospholipid methyltransferase Aa_trans PF01490.18 gi|407465696|ref|YP_006776578.1| - 0.27 9.9 10.9 0.012 14.3 2.9 2.1 1 1 0 2 2 2 0 Transmembrane amino acid transporter protein DUF3278 PF11683.8 gi|407465696|ref|YP_006776578.1| - 0.45 10.6 8.6 0.082 13.0 4.8 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3278) Flavi_M PF01004.19 gi|407465696|ref|YP_006776578.1| - 1 9.1 4.3 0.97 9.2 0.2 2.7 2 1 1 3 3 3 0 Flavivirus envelope glycoprotein M Brr6_like_C_C PF10104.9 gi|407465696|ref|YP_006776578.1| - 2.5 7.9 6.3 0.34 10.7 1.1 2.2 2 1 0 2 2 2 0 Di-sulfide bridge nucleocytoplasmic transport domain DHHC PF01529.20 gi|407465696|ref|YP_006776578.1| - 4.4 7.4 6.4 4 7.5 0.9 2.2 1 1 1 2 2 2 0 DHHC palmitoyltransferase DUF4382 PF14321.6 gi|407465697|ref|YP_006776579.1| - 0.026 14.8 0.3 0.035 14.4 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4382) Nitroreductase PF00881.24 gi|407465698|ref|YP_006776580.1| - 2.5e-25 89.5 0.0 4.3e-25 88.7 0.0 1.4 1 1 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|407465698|ref|YP_006776580.1| - 0.0056 16.3 1.0 0.64 9.5 0.0 2.8 2 1 1 3 3 3 3 Putative TM nitroreductase FMN_red PF03358.15 gi|407465699|ref|YP_006776581.1| - 1.2e-21 77.0 0.0 1.6e-21 76.6 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|407465699|ref|YP_006776581.1| - 1.7e-07 31.1 0.0 2.1e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Kei1 PF08552.11 gi|407465700|ref|YP_006776582.1| - 0.004 17.1 0.2 0.0048 16.8 0.2 1.2 1 0 0 1 1 1 1 Inositolphosphorylceramide synthase subunit Kei1 DUF2730 PF10805.8 gi|407465700|ref|YP_006776582.1| - 0.053 13.6 7.7 0.038 14.1 3.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) FAM76 PF16046.5 gi|407465700|ref|YP_006776582.1| - 0.41 9.9 7.6 0.62 9.4 7.6 1.2 1 0 0 1 1 1 0 FAM76 protein HTH_23 PF13384.6 gi|407465701|ref|YP_006776583.1| - 0.0067 16.2 0.0 0.011 15.5 0.0 1.5 1 1 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.10 gi|407465701|ref|YP_006776583.1| - 0.024 14.4 0.0 0.21 11.4 0.0 2.0 2 0 0 2 2 2 0 IclR helix-turn-helix domain CC190 PF15768.5 gi|407465701|ref|YP_006776583.1| - 0.055 13.5 0.1 0.062 13.4 0.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 190 DUF5388 PF17363.2 gi|407465701|ref|YP_006776583.1| - 0.06 13.5 0.1 0.098 12.9 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5388) GntR PF00392.21 gi|407465701|ref|YP_006776583.1| - 0.088 12.5 0.1 0.13 12.0 0.1 1.5 1 1 0 1 1 1 0 Bacterial regulatory proteins, gntR family LD_cluster3 PF18180.1 gi|407465701|ref|YP_006776583.1| - 0.17 11.5 0.0 0.19 11.3 0.0 1.2 1 1 0 1 1 1 0 SLOG cluster3 family Pro_isomerase PF00160.21 gi|407465702|ref|YP_006776584.1| - 1.9e-51 174.5 0.0 2.2e-51 174.3 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF5300 PF17224.3 gi|407465703|ref|YP_006776585.1| - 0.15 12.3 3.3 1 9.7 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5300) Formin_GBD_N PF18382.1 gi|407465706|ref|YP_006776588.1| - 0.058 13.9 0.2 0.12 12.8 0.0 1.6 2 0 0 2 2 2 0 Formin N-terminal GTPase-binding domain DUF3712 PF12505.8 gi|407465707|ref|YP_006776589.1| - 0.031 14.5 0.1 0.046 14.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3712) PfkB PF00294.24 gi|407465708|ref|YP_006776590.1| - 2.1e-24 86.4 0.4 5.3e-24 85.1 0.4 1.6 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 gi|407465708|ref|YP_006776590.1| - 7e-05 22.3 0.1 0.00015 21.3 0.0 1.5 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 gi|407465708|ref|YP_006776590.1| - 0.001 18.6 0.2 0.35 10.3 0.1 2.4 2 1 0 2 2 2 2 Carbohydrate kinase OstA_2 PF13100.6 gi|407465708|ref|YP_006776590.1| - 0.04 13.5 0.0 0.076 12.6 0.0 1.4 1 0 0 1 1 1 0 OstA-like protein dUTPase_2 PF08761.11 gi|407465709|ref|YP_006776591.1| - 2.3e-17 63.6 7.7 7.9e-13 48.9 0.6 2.0 1 1 1 2 2 2 2 dUTPase PRA-PH PF01503.17 gi|407465709|ref|YP_006776591.1| - 0.0023 18.4 0.0 0.003 18.0 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase Reovirus_cap PF00979.17 gi|407465709|ref|YP_006776591.1| - 0.094 11.9 0.1 0.1 11.7 0.1 1.0 1 0 0 1 1 1 0 Reovirus outer capsid protein, Sigma 3 MtrA PF04208.14 gi|407465710|ref|YP_006776592.1| - 2.1e-24 86.1 0.0 2.7e-24 85.8 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A Phytoreo_S7 PF07236.11 gi|407465710|ref|YP_006776592.1| - 0.028 12.8 0.1 0.032 12.6 0.1 1.2 1 0 0 1 1 1 0 Phytoreovirus S7 protein DegT_DnrJ_EryC1 PF01041.17 gi|407465711|ref|YP_006776593.1| - 3.2e-116 388.6 0.0 3.6e-116 388.4 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|407465711|ref|YP_006776593.1| - 4.1e-10 39.4 0.0 6e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|407465711|ref|YP_006776593.1| - 1.9e-08 33.7 0.2 1.9e-08 33.7 0.2 1.5 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|407465711|ref|YP_006776593.1| - 1e-07 30.8 0.1 1.6e-07 30.2 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|407465711|ref|YP_006776593.1| - 0.00019 20.8 0.0 0.00042 19.7 0.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase ComK PF06338.11 gi|407465711|ref|YP_006776593.1| - 0.0027 17.3 0.0 0.006 16.2 0.0 1.5 1 0 0 1 1 1 1 ComK protein OKR_DC_1 PF01276.20 gi|407465711|ref|YP_006776593.1| - 0.031 13.0 0.1 0.044 12.5 0.1 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain zf-C2H2 PF00096.26 gi|407465713|ref|YP_006776595.1| - 1.6e-08 34.5 4.8 0.001 19.4 0.4 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|407465713|ref|YP_006776595.1| - 2.6e-07 30.9 7.2 0.0063 17.3 1.4 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger TF_Zn_Ribbon PF08271.12 gi|407465713|ref|YP_006776595.1| - 7.2e-05 22.2 0.4 0.039 13.5 0.0 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding A2L_zn_ribbon PF08792.10 gi|407465713|ref|YP_006776595.1| - 0.00011 21.9 0.9 0.15 11.8 0.0 2.3 2 0 0 2 2 2 2 A2L zinc ribbon domain zinc_ribbon_15 PF17032.5 gi|407465713|ref|YP_006776595.1| - 0.00023 21.8 5.5 0.00026 21.7 5.5 1.2 1 0 0 1 1 1 1 zinc-ribbon family zf-C2H2_3rep PF18868.1 gi|407465713|ref|YP_006776595.1| - 0.001 19.8 2.6 0.003 18.2 2.6 1.7 1 1 0 1 1 1 1 Zinc finger C2H2-type, 3 repeats zinc_ribbon_2 PF13240.6 gi|407465713|ref|YP_006776595.1| - 0.0021 17.7 3.4 0.066 13.0 0.1 2.6 2 1 0 2 2 2 1 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|407465713|ref|YP_006776595.1| - 0.0084 16.0 3.4 1.1 9.2 0.8 2.3 2 0 0 2 2 2 2 RNA polymerases M/15 Kd subunit zinc_ribbon_4 PF13717.6 gi|407465713|ref|YP_006776595.1| - 0.011 15.6 4.5 0.21 11.6 0.1 2.5 2 1 0 2 2 2 0 zinc-ribbon domain zf-FPG_IleRS PF06827.14 gi|407465713|ref|YP_006776595.1| - 0.021 14.7 4.7 0.92 9.4 0.3 2.5 2 1 0 2 2 2 0 Zinc finger found in FPG and IleRS zf_C2H2_ZHX PF18387.1 gi|407465713|ref|YP_006776595.1| - 0.024 14.3 2.2 0.19 11.4 0.2 2.0 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zf-BED PF02892.15 gi|407465713|ref|YP_006776595.1| - 0.026 14.6 6.9 0.41 10.7 0.7 2.2 1 1 1 2 2 2 0 BED zinc finger Prok-RING_1 PF14446.6 gi|407465713|ref|YP_006776595.1| - 0.026 14.5 5.9 0.15 12.0 1.5 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 DZR PF12773.7 gi|407465713|ref|YP_006776595.1| - 0.055 13.5 5.0 0.13 12.3 5.0 1.7 1 1 0 1 1 1 0 Double zinc ribbon zf_UBZ PF18439.1 gi|407465713|ref|YP_006776595.1| - 0.065 12.8 2.4 0.26 10.9 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger FYVE PF01363.21 gi|407465713|ref|YP_006776595.1| - 0.07 13.3 5.8 1 9.5 5.8 2.0 1 1 0 1 1 1 0 FYVE zinc finger XAF1_C PF18608.1 gi|407465713|ref|YP_006776595.1| - 0.08 12.5 7.4 0.047 13.3 2.3 2.5 1 1 1 2 2 2 0 XIAP-associated factor 1 C-terminal domain zf-C2H2_2 PF12756.7 gi|407465713|ref|YP_006776595.1| - 0.085 13.2 6.4 2.3 8.6 1.5 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_6 PF13912.6 gi|407465713|ref|YP_006776595.1| - 0.1 12.6 1.9 0.1 12.6 1.9 2.6 2 1 0 2 2 2 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 gi|407465713|ref|YP_006776595.1| - 0.11 12.7 5.7 0.46 10.6 3.9 2.2 1 1 1 2 2 2 0 Zinc ribbon domain DUF35_N PF12172.8 gi|407465713|ref|YP_006776595.1| - 0.12 12.2 1.5 2.5 8.1 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) ADK_lid PF05191.14 gi|407465713|ref|YP_006776595.1| - 0.21 11.6 5.9 1.6 8.8 5.4 2.1 1 1 1 2 2 2 0 Adenylate kinase, active site lid zf-C2H2_11 PF16622.5 gi|407465713|ref|YP_006776595.1| - 0.35 10.7 4.3 3.8 7.4 0.0 2.5 2 1 0 2 2 2 0 zinc-finger C2H2-type zf-Mss51 PF13824.6 gi|407465713|ref|YP_006776595.1| - 0.39 10.8 7.2 0.98 9.6 2.1 2.3 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-C2H2_3 PF13878.6 gi|407465713|ref|YP_006776595.1| - 0.72 9.7 11.1 4.7 7.1 0.2 2.7 2 1 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF983 PF06170.12 gi|407465713|ref|YP_006776595.1| - 0.86 10.1 1.9 5.5 7.5 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF983) UPF0547 PF10571.9 gi|407465713|ref|YP_006776595.1| - 0.89 9.7 0.2 0.89 9.7 0.2 2.5 3 0 0 3 3 2 0 Uncharacterised protein family UPF0547 zf-H2C2_2 PF13465.6 gi|407465713|ref|YP_006776595.1| - 3.1 8.4 12.9 4.8 7.8 2.9 3.0 3 0 0 3 3 3 0 Zinc-finger double domain ACP_PD PF04336.12 gi|407465714|ref|YP_006776596.1| - 0.0074 16.7 0.0 0.0081 16.6 0.0 1.0 1 0 0 1 1 1 1 Acyl carrier protein phosphodiesterase tRNA-synt_1b PF00579.25 gi|407465715|ref|YP_006776597.1| - 1.3e-41 142.8 0.1 1.8e-41 142.4 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) TP_methylase PF00590.20 gi|407465716|ref|YP_006776598.1| - 3.9e-38 131.5 0.0 4.6e-38 131.3 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases PD40 PF07676.12 gi|407465717|ref|YP_006776599.1| - 0.0036 17.2 3.4 7.9 6.6 0.1 4.6 5 0 0 5 5 5 2 WD40-like Beta Propeller Repeat Lipoprotein_15 PF03640.15 gi|407465717|ref|YP_006776599.1| - 0.098 12.2 0.7 13 5.4 0.0 2.7 3 0 0 3 3 3 0 Secreted repeat of unknown function AA_kinase PF00696.28 gi|407465718|ref|YP_006776600.1| - 1e-50 172.6 0.8 1e-50 172.6 0.8 1.6 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.6 gi|407465718|ref|YP_006776600.1| - 1.3e-21 76.2 3.9 1.8e-12 46.8 0.2 2.9 2 0 0 2 2 2 2 ACT domain ACT PF01842.25 gi|407465718|ref|YP_006776600.1| - 2.9e-20 71.7 0.6 5.6e-10 38.8 0.0 2.8 2 0 0 2 2 2 2 ACT domain FIST PF08495.10 gi|407465718|ref|YP_006776600.1| - 0.015 15.3 0.0 0.092 12.8 0.0 2.3 2 1 0 2 2 2 0 FIST N domain ACT_6 PF13740.6 gi|407465718|ref|YP_006776600.1| - 0.033 14.2 1.6 0.38 10.8 0.1 3.1 4 0 0 4 4 4 0 ACT domain Phasin PF05597.11 gi|407465718|ref|YP_006776600.1| - 0.19 11.8 2.8 7.2 6.6 0.6 3.3 3 0 0 3 3 3 0 Poly(hydroxyalcanoate) granule associated protein (phasin) LytR_C PF13399.6 gi|407465718|ref|YP_006776600.1| - 0.3 12.1 2.3 0.51 11.4 0.1 2.5 3 1 0 3 3 3 0 LytR cell envelope-related transcriptional attenuator PCNA_N PF00705.18 gi|407465719|ref|YP_006776601.1| - 4.1e-19 68.5 0.0 7.5e-19 67.7 0.0 1.4 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|407465719|ref|YP_006776601.1| - 1.9e-16 60.4 0.8 6.6e-15 55.4 0.0 2.7 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 gi|407465719|ref|YP_006776601.1| - 6e-08 32.1 0.0 0.00061 18.9 0.0 2.2 1 1 1 2 2 2 2 Repair protein Rad1/Rec1/Rad17 Rad9 PF04139.13 gi|407465719|ref|YP_006776601.1| - 0.0024 17.3 0.0 0.0035 16.8 0.0 1.3 1 0 0 1 1 1 1 Rad9 Receptor_2B4 PF11465.8 gi|407465719|ref|YP_006776601.1| - 0.059 13.6 0.1 0.14 12.4 0.1 1.7 2 0 0 2 2 2 0 Natural killer cell receptor 2B4 TFIIS_C PF01096.18 gi|407465720|ref|YP_006776602.1| - 3.1e-18 65.3 5.7 3.1e-18 65.3 5.7 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|407465720|ref|YP_006776602.1| - 0.00011 22.0 14.0 0.024 14.5 5.3 3.7 3 1 0 3 3 3 2 RNA polymerases M/15 Kd subunit zinc_ribbon_4 PF13717.6 gi|407465720|ref|YP_006776602.1| - 0.0016 18.3 15.0 3.3 7.7 3.8 4.1 3 1 0 3 3 3 3 zinc-ribbon domain DZR PF12773.7 gi|407465720|ref|YP_006776602.1| - 0.0021 18.0 11.7 4 7.5 11.7 2.6 1 1 0 1 1 1 1 Double zinc ribbon Elf1 PF05129.13 gi|407465720|ref|YP_006776602.1| - 0.016 15.2 3.7 0.67 10.0 0.2 2.3 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like OrfB_Zn_ribbon PF07282.11 gi|407465720|ref|YP_006776602.1| - 0.019 14.9 13.5 0.12 12.3 2.0 2.7 2 1 1 3 3 3 0 Putative transposase DNA-binding domain zf-DNA_Pol PF08996.10 gi|407465720|ref|YP_006776602.1| - 0.043 13.6 0.2 0.043 13.6 0.2 1.8 2 0 0 2 2 2 0 DNA Polymerase alpha zinc finger zinc-ribbons_6 PF07191.12 gi|407465720|ref|YP_006776602.1| - 0.066 13.2 0.8 0.066 13.2 0.8 2.8 2 1 0 2 2 2 0 zinc-ribbons Zn_Tnp_IS1595 PF12760.7 gi|407465720|ref|YP_006776602.1| - 0.097 12.7 15.9 2.1 8.4 5.0 3.1 2 2 1 3 3 3 0 Transposase zinc-ribbon domain LRV_FeS PF05484.11 gi|407465720|ref|YP_006776602.1| - 0.18 11.8 4.6 14 5.8 0.1 3.2 3 0 0 3 3 3 0 LRV protein FeS4 cluster zinc_ribbon_2 PF13240.6 gi|407465720|ref|YP_006776602.1| - 0.27 11.0 19.1 1.9 8.3 7.4 3.7 3 1 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|407465720|ref|YP_006776602.1| - 0.54 10.4 11.4 11 6.3 0.1 4.1 4 0 0 4 4 4 0 Zinc ribbon domain HypA PF01155.19 gi|407465720|ref|YP_006776602.1| - 0.76 9.8 9.4 4.8 7.2 1.2 2.5 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-NADH-PPase PF09297.11 gi|407465720|ref|YP_006776602.1| - 0.78 9.5 11.0 0.8 9.4 3.3 3.4 3 1 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_L44 PF00935.19 gi|407465720|ref|YP_006776602.1| - 0.89 10.1 7.5 21 5.7 1.2 3.3 3 1 0 3 3 3 0 Ribosomal protein L44 PHD PF00628.29 gi|407465720|ref|YP_006776602.1| - 1.2 9.1 12.2 2.7 7.9 1.4 2.6 2 1 0 2 2 2 0 PHD-finger C1_1 PF00130.22 gi|407465720|ref|YP_006776602.1| - 1.4 8.9 13.5 0.39 10.6 2.4 2.7 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-ribbon_3 PF13248.6 gi|407465720|ref|YP_006776602.1| - 2.7 7.5 12.7 3.3 7.2 0.2 3.9 4 0 0 4 4 4 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|407465720|ref|YP_006776602.1| - 2.7 7.8 14.7 3.9 7.3 0.3 4.1 4 0 0 4 4 4 0 A2L zinc ribbon domain zinc_ribbon_15 PF17032.5 gi|407465720|ref|YP_006776602.1| - 3.6 8.4 12.0 5.9e+02 1.3 12.0 2.9 1 1 0 1 1 1 0 zinc-ribbon family FeS PF04060.13 gi|407465720|ref|YP_006776602.1| - 4.2 7.1 9.6 5.4 6.8 0.2 2.8 3 0 0 3 3 3 0 Putative Fe-S cluster Baculo_LEF5_C PF11792.8 gi|407465720|ref|YP_006776602.1| - 4.5 7.0 13.2 0.14 11.9 1.6 3.1 3 1 0 3 3 3 0 Baculoviridae late expression factor 5 C-terminal domain TackOD1 PF18551.1 gi|407465720|ref|YP_006776602.1| - 5.6 6.6 9.8 1.2 8.8 0.8 2.9 2 1 1 3 3 3 0 Thaumarchaeal output domain 1 RPA_interact_C PF14768.6 gi|407465720|ref|YP_006776602.1| - 6.5 7.4 8.8 13 6.4 1.6 2.9 1 1 2 3 3 3 0 Replication protein A interacting C-terminal C1_2 PF03107.16 gi|407465720|ref|YP_006776602.1| - 6.7 7.1 14.2 16 5.9 4.8 2.9 2 1 0 2 2 2 0 C1 domain Nudix_N_2 PF14803.6 gi|407465720|ref|YP_006776602.1| - 7.5 6.6 15.1 19 5.2 0.4 4.4 3 2 0 3 3 3 0 Nudix N-terminal DNA_RNApol_7kD PF03604.13 gi|407465720|ref|YP_006776602.1| - 9.9 5.9 12.4 12 5.7 1.4 3.3 3 0 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit RNA_pol_L_2 PF13656.6 gi|407465721|ref|YP_006776603.1| - 3.3e-13 49.2 0.0 3.8e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain DUF4748 PF15932.5 gi|407465723|ref|YP_006776605.1| - 0.033 13.9 0.1 0.088 12.6 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) DAPDH_C PF16654.5 gi|407465723|ref|YP_006776605.1| - 0.077 12.8 1.3 0.17 11.8 0.3 2.1 2 0 0 2 2 2 0 Diaminopimelic acid dehydrogenase C-terminal domain HCO3_cotransp PF00955.21 gi|407465723|ref|YP_006776605.1| - 2.3 6.9 7.9 0.16 10.7 0.2 2.1 2 0 0 2 2 2 0 HCO3- transporter family VWA PF00092.28 gi|407465724|ref|YP_006776606.1| - 5.1e-26 92.0 0.2 7.5e-26 91.4 0.2 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|407465724|ref|YP_006776606.1| - 6.4e-21 75.0 0.0 1.3e-20 74.0 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain BatA PF07584.11 gi|407465724|ref|YP_006776606.1| - 1.4e-08 35.0 0.0 2.7e-08 34.1 0.0 1.5 1 0 0 1 1 1 1 Aerotolerance regulator N-terminal DUF1194 PF06707.11 gi|407465724|ref|YP_006776606.1| - 0.00026 20.3 0.0 0.0064 15.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1194) VWA_CoxE PF05762.14 gi|407465724|ref|YP_006776606.1| - 0.0031 16.9 0.0 0.011 15.1 0.0 1.7 1 1 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_3 PF13768.6 gi|407465724|ref|YP_006776606.1| - 0.0046 16.9 0.0 0.029 14.3 0.0 2.1 2 0 0 2 2 2 1 von Willebrand factor type A domain Ssl1 PF04056.14 gi|407465724|ref|YP_006776606.1| - 0.0088 15.9 0.0 0.026 14.3 0.0 1.6 2 0 0 2 2 2 1 Ssl1-like CobT_C PF11775.8 gi|407465724|ref|YP_006776606.1| - 0.08 12.6 0.0 0.48 10.0 0.0 2.0 1 1 1 2 2 2 0 Cobalamin biosynthesis protein CobT VWA domain ETRAMP PF09716.10 gi|407465724|ref|YP_006776606.1| - 1.2 9.3 6.2 1.2 9.3 3.2 2.2 2 1 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Sigma_reg_N PF13800.6 gi|407465724|ref|YP_006776606.1| - 1.6 9.1 7.2 5.5 7.3 0.9 2.6 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF58 PF01882.18 gi|407465725|ref|YP_006776607.1| - 3.4e-23 81.7 0.0 7.2e-23 80.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|407465725|ref|YP_006776607.1| - 9.2e-11 42.4 0.0 2.5e-10 40.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|407465725|ref|YP_006776607.1| - 0.049 13.9 0.2 0.091 13.0 0.2 1.5 1 0 0 1 1 1 0 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|407465725|ref|YP_006776607.1| - 0.14 11.5 0.0 0.52 9.7 0.0 1.8 1 1 0 1 1 1 0 VWA domain containing CoxE-like protein AAA_3 PF07726.11 gi|407465726|ref|YP_006776608.1| - 2.3e-64 215.1 0.1 4.1e-64 214.3 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|407465726|ref|YP_006776608.1| - 2.7e-17 62.4 0.0 4.6e-17 61.6 0.0 1.3 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|407465726|ref|YP_006776608.1| - 1.9e-14 53.8 0.0 6.6e-14 52.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|407465726|ref|YP_006776608.1| - 6.8e-06 25.9 0.0 2.1e-05 24.3 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain MCM PF00493.23 gi|407465726|ref|YP_006776608.1| - 2.5e-05 23.5 0.3 0.00022 20.4 0.1 2.4 2 1 0 2 2 2 1 MCM P-loop domain RuvB_N PF05496.12 gi|407465726|ref|YP_006776608.1| - 0.00019 21.2 0.1 0.002 17.9 0.1 2.4 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|407465726|ref|YP_006776608.1| - 0.00022 20.7 0.2 0.029 13.8 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 gi|407465726|ref|YP_006776608.1| - 0.00047 20.6 0.0 0.00098 19.6 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|407465726|ref|YP_006776608.1| - 0.079 13.3 0.0 0.12 12.7 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain DUF5601 PF18151.1 gi|407465726|ref|YP_006776608.1| - 0.11 12.8 0.1 0.4 11.0 0.1 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF5601) DSPc PF00782.20 gi|407465729|ref|YP_006776611.1| - 2.4e-17 63.0 0.0 3.2e-17 62.6 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 gi|407465729|ref|YP_006776611.1| - 1.8e-08 34.2 0.0 2.7e-08 33.7 0.0 1.3 1 1 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 gi|407465729|ref|YP_006776611.1| - 7.4e-08 32.7 0.0 1.1e-07 32.1 0.0 1.2 1 0 0 1 1 1 1 Inositol hexakisphosphate CDKN3 PF05706.12 gi|407465729|ref|YP_006776611.1| - 0.00046 19.9 0.0 0.00064 19.4 0.0 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase2 PF03162.13 gi|407465729|ref|YP_006776611.1| - 0.0012 18.4 0.0 0.0019 17.8 0.0 1.3 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase3 PF13350.6 gi|407465729|ref|YP_006776611.1| - 0.0028 17.7 0.0 0.0035 17.4 0.0 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family GDH_N PF12466.8 gi|407465729|ref|YP_006776611.1| - 0.095 12.9 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Glutamate dehydrogenase N terminal UDPG_MGDP_dh_N PF03721.14 gi|407465729|ref|YP_006776611.1| - 0.13 11.8 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Cyclase PF04199.13 gi|407465730|ref|YP_006776612.1| - 1.2e-29 103.3 0.0 1.5e-29 103.0 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase AsnC_trans_reg PF01037.21 gi|407465731|ref|YP_006776613.1| - 1.4e-07 31.3 0.1 1.7e-07 31.1 0.1 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain Lsr2 PF11774.8 gi|407465731|ref|YP_006776613.1| - 0.014 15.6 0.1 0.015 15.4 0.1 1.1 1 0 0 1 1 1 0 Lsr2 KH_5 PF13184.6 gi|407465731|ref|YP_006776613.1| - 0.11 12.6 1.0 1.6 8.9 0.1 2.1 2 0 0 2 2 2 0 NusA-like KH domain Aminotran_5 PF00266.19 gi|407465732|ref|YP_006776614.1| - 1.6e-70 238.0 0.0 1.9e-70 237.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|407465732|ref|YP_006776614.1| - 1.8e-07 30.6 0.0 3e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|407465732|ref|YP_006776614.1| - 0.00093 18.6 0.0 0.0013 18.1 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase YgbB PF02542.16 gi|407465732|ref|YP_006776614.1| - 0.027 14.7 0.0 0.065 13.5 0.0 1.6 1 0 0 1 1 1 0 YgbB family Na_sulph_symp PF00939.19 gi|407465733|ref|YP_006776615.1| - 0.025 13.7 0.0 0.031 13.3 0.0 1.1 1 0 0 1 1 1 0 Sodium:sulfate symporter transmembrane region Fer4 PF00037.27 gi|407465734|ref|YP_006776616.1| - 2e-11 43.2 10.6 5.1e-07 29.3 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|407465734|ref|YP_006776616.1| - 6.9e-09 36.2 3.7 9.8e-09 35.7 3.7 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|407465734|ref|YP_006776616.1| - 3.5e-08 33.2 8.1 0.0013 18.7 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|407465734|ref|YP_006776616.1| - 4.5e-08 33.1 1.8 6.4e-08 32.6 1.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|407465734|ref|YP_006776616.1| - 4.4e-06 26.8 4.1 1.8e-05 24.8 4.2 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|407465734|ref|YP_006776616.1| - 1.5e-05 24.8 7.8 0.018 15.1 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|407465734|ref|YP_006776616.1| - 7.9e-05 23.1 4.2 0.12 12.9 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_10 PF13237.6 gi|407465734|ref|YP_006776616.1| - 0.00014 21.9 8.3 0.0054 16.8 9.2 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|407465734|ref|YP_006776616.1| - 0.00025 21.3 6.9 0.081 13.5 2.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|407465734|ref|YP_006776616.1| - 0.00027 21.8 5.4 0.075 14.0 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|407465734|ref|YP_006776616.1| - 0.0013 19.5 11.2 0.097 13.7 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|407465734|ref|YP_006776616.1| - 0.0019 19.0 3.8 0.3 12.0 0.9 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|407465734|ref|YP_006776616.1| - 0.0052 17.2 5.8 0.048 14.1 5.8 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|407465734|ref|YP_006776616.1| - 0.031 14.8 6.7 1 9.9 6.8 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|407465734|ref|YP_006776616.1| - 0.08 13.7 10.7 0.51 11.1 2.1 2.8 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|407465734|ref|YP_006776616.1| - 0.7 10.1 10.3 1.8 8.8 3.1 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Copper-bind PF00127.20 gi|407465735|ref|YP_006776617.1| - 2.4e-07 31.1 0.0 4.4e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|407465735|ref|YP_006776617.1| - 0.0044 17.1 0.0 0.34 11.1 0.0 3.2 2 1 0 2 2 2 1 Cupredoxin-like domain Slp PF03843.13 gi|407465735|ref|YP_006776617.1| - 0.016 14.6 0.0 0.037 13.4 0.0 1.6 1 0 0 1 1 1 0 Outer membrane lipoprotein Slp family DUF4064 PF13273.6 gi|407465735|ref|YP_006776617.1| - 0.019 15.3 0.0 0.14 12.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Guanylate_cyc PF00211.20 gi|407465736|ref|YP_006776618.1| - 2e-13 50.4 0.5 4.3e-13 49.3 0.5 1.5 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain HAMP PF00672.25 gi|407465736|ref|YP_006776618.1| - 3.2e-13 49.8 0.0 7.7e-13 48.6 0.0 1.7 1 0 0 1 1 1 1 HAMP domain dCache_1 PF02743.18 gi|407465736|ref|YP_006776618.1| - 8.9e-12 45.3 0.9 1.9e-11 44.3 0.9 1.5 1 0 0 1 1 1 1 Cache domain Ammonium_transp PF00909.21 gi|407465738|ref|YP_006776620.1| - 6.3e-116 387.4 32.7 7.1e-116 387.2 32.7 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.22 gi|407465739|ref|YP_006776621.1| - 3e-14 53.5 0.5 3.5e-14 53.2 0.5 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II P-II PF00543.22 gi|407465740|ref|YP_006776622.1| - 6.3e-10 39.6 0.3 1.1e-09 38.8 0.3 1.4 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF1599 PF07659.11 gi|407465740|ref|YP_006776622.1| - 0.087 13.3 0.0 0.2 12.1 0.0 1.6 1 0 0 1 1 1 0 Nucleotide modification associated domain 1 DnaJ PF00226.31 gi|407465741|ref|YP_006776623.1| - 1.5e-10 41.0 0.1 5.6e-10 39.2 0.0 2.1 2 0 0 2 2 2 1 DnaJ domain KIAA1430 PF13879.6 gi|407465741|ref|YP_006776623.1| - 0.088 13.6 1.1 0.21 12.4 1.1 1.8 1 1 0 1 1 1 0 KIAA1430 homologue HIP1_clath_bdg PF16515.5 gi|407465741|ref|YP_006776623.1| - 0.24 12.0 0.8 0.46 11.1 0.8 1.4 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF3519 PF12033.8 gi|407465741|ref|YP_006776623.1| - 0.78 10.2 4.4 5.1 7.6 0.2 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3519) Usp PF00582.26 gi|407465742|ref|YP_006776624.1| - 1e-30 107.1 0.0 1.2e-30 106.9 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF3880 PF12996.7 gi|407465742|ref|YP_006776624.1| - 0.034 14.2 0.0 0.051 13.7 0.0 1.3 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) CBS PF00571.28 gi|407465743|ref|YP_006776625.1| - 2.2e-38 130.5 3.0 6.3e-12 45.7 0.0 4.1 4 0 0 4 4 4 4 CBS domain Sigma54_DBD PF04552.13 gi|407465743|ref|YP_006776625.1| - 0.015 15.0 0.4 0.048 13.4 0.0 1.9 2 1 0 2 2 2 0 Sigma-54, DNA binding domain Imm15 PF15561.6 gi|407465743|ref|YP_006776625.1| - 0.05 13.8 1.1 0.11 12.8 0.9 1.7 1 1 0 1 1 1 0 Immunity protein 15 DUF3791 PF12668.7 gi|407465743|ref|YP_006776625.1| - 0.1 12.6 0.8 0.65 10.1 0.2 2.6 3 1 1 4 4 4 0 Protein of unknown function (DUF3791) VIT1 PF01988.19 gi|407465744|ref|YP_006776626.1| - 3.9e-56 190.3 0.2 4.4e-56 190.2 0.2 1.0 1 0 0 1 1 1 1 VIT family Ribosomal_L27_C PF18471.1 gi|407465744|ref|YP_006776626.1| - 0.012 15.0 0.0 0.22 10.9 0.0 2.0 2 0 0 2 2 2 0 Ribosomal L27 protein C-terminal domain DUF4996 PF16387.5 gi|407465744|ref|YP_006776626.1| - 0.15 12.6 0.1 0.22 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function SieB PF14163.6 gi|407465744|ref|YP_006776626.1| - 0.15 11.5 1.8 0.16 11.5 0.0 1.8 2 1 1 3 3 3 0 Super-infection exclusion protein B AA_permease_2 PF13520.6 gi|407465745|ref|YP_006776627.1| - 1.1e-53 182.6 54.7 1.4e-53 182.3 54.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|407465745|ref|YP_006776627.1| - 1.7e-40 139.0 50.8 2.3e-40 138.6 50.8 1.2 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 gi|407465745|ref|YP_006776627.1| - 1e-07 31.1 22.9 1e-07 31.1 22.9 2.7 2 1 1 3 3 3 1 Spore germination protein Na_H_Exchanger PF00999.21 gi|407465746|ref|YP_006776628.1| - 2.4e-50 171.4 53.3 2.8e-50 171.2 53.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Gln-synt_C PF00120.24 gi|407465748|ref|YP_006776630.1| - 2.3e-118 395.2 0.0 2.8e-118 394.9 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|407465748|ref|YP_006776630.1| - 9e-24 83.0 0.1 1.8e-23 82.1 0.1 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Radical_SAM PF04055.21 gi|407465749|ref|YP_006776631.1| - 6.2e-05 23.4 0.0 0.00015 22.2 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|407465749|ref|YP_006776631.1| - 7.8e-05 22.8 0.0 0.00019 21.5 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|407465749|ref|YP_006776631.1| - 0.00022 21.5 0.0 0.00049 20.4 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain MS_channel PF00924.18 gi|407465750|ref|YP_006776632.1| - 1.4e-31 109.6 0.2 2.9e-31 108.6 0.2 1.5 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF996 PF06195.13 gi|407465750|ref|YP_006776632.1| - 0.014 15.7 7.7 0.014 15.7 7.7 2.4 3 1 0 3 3 3 0 Protein of unknown function (DUF996) DUF2208 PF09973.9 gi|407465750|ref|YP_006776632.1| - 0.03 13.9 2.6 0.081 12.5 2.6 1.7 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) PepSY_TM PF03929.16 gi|407465750|ref|YP_006776632.1| - 0.17 11.5 2.0 0.25 11.0 0.0 1.9 2 0 0 2 2 2 0 PepSY-associated TM region DUF1129 PF06570.11 gi|407465750|ref|YP_006776632.1| - 0.83 9.1 4.4 0.27 10.7 1.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) TctB PF07331.11 gi|407465750|ref|YP_006776632.1| - 1.2 9.4 6.6 0.93 9.8 2.0 2.5 2 1 0 2 2 2 0 Tripartite tricarboxylate transporter TctB family Sulf_transp PF04143.14 gi|407465750|ref|YP_006776632.1| - 5.1 6.6 8.0 3.8 7.0 0.2 2.2 2 0 0 2 2 2 0 Sulphur transport Pribosyltran_N PF13793.6 gi|407465751|ref|YP_006776633.1| - 1.4e-25 89.5 0.9 5e-24 84.5 0.1 2.3 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|407465751|ref|YP_006776633.1| - 6.8e-19 67.9 0.3 1.6e-18 66.7 0.3 1.6 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|407465751|ref|YP_006776633.1| - 1.2e-12 48.2 6.3 2.7e-12 47.1 0.9 3.1 2 2 1 3 3 3 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|407465751|ref|YP_006776633.1| - 3.9e-06 26.4 0.0 7.2e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|407465751|ref|YP_006776633.1| - 0.0003 20.3 0.2 0.00056 19.5 0.2 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase Asp_Glu_race PF01177.22 gi|407465751|ref|YP_006776633.1| - 0.0083 16.0 0.1 0.022 14.6 0.1 1.7 2 0 0 2 2 2 1 Asp/Glu/Hydantoin racemase UPF0020 PF01170.18 gi|407465752|ref|YP_006776634.1| - 5.9e-19 68.5 0.0 6.1e-18 65.2 0.0 2.1 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 N6_N4_Mtase PF01555.18 gi|407465752|ref|YP_006776634.1| - 2e-12 47.3 0.0 3.1e-11 43.4 0.0 2.2 2 1 0 2 2 2 1 DNA methylase Methyltransf_31 PF13847.6 gi|407465752|ref|YP_006776634.1| - 4.2e-10 39.6 0.0 7.4e-10 38.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407465752|ref|YP_006776634.1| - 1.6e-07 31.9 0.0 3.4e-07 30.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 gi|407465752|ref|YP_006776634.1| - 3.3e-06 26.6 0.1 1e-05 24.9 0.0 1.8 2 0 0 2 2 2 1 N-6 DNA Methylase Cons_hypoth95 PF03602.15 gi|407465752|ref|YP_006776634.1| - 5.9e-06 26.1 0.0 1e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|407465752|ref|YP_006776634.1| - 2.9e-05 23.6 0.0 6.9e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) AviRa PF11599.8 gi|407465752|ref|YP_006776634.1| - 0.00011 21.8 0.0 0.068 12.6 0.0 2.4 1 1 1 2 2 2 2 RRNA methyltransferase AviRa MTS PF05175.14 gi|407465752|ref|YP_006776634.1| - 0.00017 21.1 0.0 0.00033 20.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain THUMP PF02926.17 gi|407465752|ref|YP_006776634.1| - 0.00046 20.3 0.4 0.0024 18.0 0.3 2.2 1 1 0 1 1 1 1 THUMP domain Methyltransf_11 PF08241.12 gi|407465752|ref|YP_006776634.1| - 0.00073 20.1 0.0 0.0014 19.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_5 PF01795.19 gi|407465752|ref|YP_006776634.1| - 0.0033 17.0 0.0 0.0058 16.2 0.0 1.3 1 0 0 1 1 1 1 MraW methylase family Met_10 PF02475.16 gi|407465752|ref|YP_006776634.1| - 0.0043 16.8 0.0 0.0085 15.9 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein MethyltransfD12 PF02086.15 gi|407465752|ref|YP_006776634.1| - 0.0048 16.6 0.0 0.015 15.0 0.0 1.9 1 1 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase CMAS PF02353.20 gi|407465752|ref|YP_006776634.1| - 0.0048 16.2 0.0 0.0088 15.4 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 gi|407465752|ref|YP_006776634.1| - 0.013 14.9 0.0 0.025 13.9 0.0 1.5 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_15 PF09445.10 gi|407465752|ref|YP_006776634.1| - 0.02 14.4 0.2 0.054 13.1 0.0 2.0 2 1 0 2 2 2 0 RNA cap guanine-N2 methyltransferase Methyltransf_12 PF08242.12 gi|407465752|ref|YP_006776634.1| - 0.029 15.1 0.0 0.072 13.8 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|407465752|ref|YP_006776634.1| - 0.053 13.3 0.0 0.087 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 gi|407465752|ref|YP_006776634.1| - 0.071 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Lactamase_B_2 PF12706.7 gi|407465753|ref|YP_006776635.1| - 2.7e-14 53.2 0.0 8.1e-07 28.7 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|407465753|ref|YP_006776635.1| - 1.4e-05 25.2 0.0 7.2e-05 22.9 0.0 2.1 3 0 0 3 3 3 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|407465753|ref|YP_006776635.1| - 0.02 14.6 0.0 0.046 13.4 0.0 1.6 1 0 0 1 1 1 0 tRNase Z endonuclease SIR2 PF02146.17 gi|407465754|ref|YP_006776636.1| - 1.9e-53 181.0 0.0 2.4e-53 180.7 0.0 1.1 1 0 0 1 1 1 1 Sir2 family TPP_enzyme_M PF00205.22 gi|407465754|ref|YP_006776636.1| - 0.00089 19.0 0.0 0.012 15.3 0.0 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain RNA_POL_M_15KD PF02150.16 gi|407465754|ref|YP_006776636.1| - 0.044 13.7 0.7 1.8 8.5 0.0 2.6 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit MT0933_antitox PF14013.6 gi|407465755|ref|YP_006776637.1| - 0.067 13.5 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 MT0933-like antitoxin protein Phage_min_cap2 PF06152.11 gi|407465755|ref|YP_006776637.1| - 0.13 11.2 1.3 0.17 10.8 1.3 1.2 1 0 0 1 1 1 0 Phage minor capsid protein 2 Phasin PF05597.11 gi|407465755|ref|YP_006776637.1| - 0.15 12.1 0.2 0.24 11.4 0.2 1.3 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) MitMem_reg PF13012.6 gi|407465755|ref|YP_006776637.1| - 0.32 11.4 3.1 1.4 9.4 3.1 2.0 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function CCDC84 PF14968.6 gi|407465755|ref|YP_006776637.1| - 0.62 9.6 3.3 0.75 9.4 3.3 1.1 1 0 0 1 1 1 0 Coiled coil protein 84 RNA_binding PF01877.17 gi|407465756|ref|YP_006776638.1| - 1.3e-12 48.1 0.2 1.9e-12 47.5 0.2 1.3 1 0 0 1 1 1 1 RNA binding RWD PF05773.22 gi|407465756|ref|YP_006776638.1| - 0.053 13.8 1.7 0.068 13.5 0.7 1.8 1 1 1 2 2 2 0 RWD domain AAA_17 PF13207.6 gi|407465757|ref|YP_006776639.1| - 4e-14 53.2 0.2 5.2e-14 52.8 0.2 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|407465757|ref|YP_006776639.1| - 5.5e-12 46.4 0.1 8.3e-12 45.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|407465757|ref|YP_006776639.1| - 4.4e-05 23.7 0.1 0.0001 22.5 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|407465757|ref|YP_006776639.1| - 0.0014 18.9 0.0 0.0021 18.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain CoaE PF01121.20 gi|407465757|ref|YP_006776639.1| - 0.0039 16.9 0.0 0.0087 15.7 0.0 1.6 1 1 0 1 1 1 1 Dephospho-CoA kinase APS_kinase PF01583.20 gi|407465757|ref|YP_006776639.1| - 0.0084 16.0 0.0 0.028 14.3 0.0 1.8 2 0 0 2 2 2 1 Adenylylsulphate kinase ADK PF00406.22 gi|407465757|ref|YP_006776639.1| - 0.009 16.1 0.1 0.012 15.7 0.1 1.3 1 0 0 1 1 1 1 Adenylate kinase MeaB PF03308.16 gi|407465757|ref|YP_006776639.1| - 0.0092 15.0 0.1 0.017 14.1 0.1 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 gi|407465757|ref|YP_006776639.1| - 0.0094 15.7 0.2 0.018 14.8 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.12 gi|407465757|ref|YP_006776639.1| - 0.019 14.3 0.0 0.033 13.5 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin NB-ARC PF00931.22 gi|407465757|ref|YP_006776639.1| - 0.026 13.7 0.2 0.042 13.0 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain Cytidylate_kin2 PF13189.6 gi|407465757|ref|YP_006776639.1| - 0.031 14.4 0.1 5 7.2 0.0 2.2 2 0 0 2 2 2 0 Cytidylate kinase-like family AAA PF00004.29 gi|407465757|ref|YP_006776639.1| - 0.039 14.4 0.2 0.094 13.1 0.2 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|407465757|ref|YP_006776639.1| - 0.041 14.4 2.8 0.11 12.9 2.8 1.9 1 1 0 1 1 1 0 AAA domain KTI12 PF08433.10 gi|407465757|ref|YP_006776639.1| - 0.042 13.3 0.0 0.061 12.8 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 NTPase_1 PF03266.15 gi|407465757|ref|YP_006776639.1| - 0.042 13.7 0.5 0.33 10.8 0.2 2.1 1 1 1 2 2 2 0 NTPase AAA_22 PF13401.6 gi|407465757|ref|YP_006776639.1| - 0.11 12.8 0.2 0.18 12.1 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|407465757|ref|YP_006776639.1| - 0.11 12.2 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain UPF0180 PF03698.13 gi|407465757|ref|YP_006776639.1| - 0.12 12.6 0.1 0.32 11.2 0.0 1.8 2 0 0 2 2 1 0 Uncharacterised protein family (UPF0180) Ploopntkinase3 PF18751.1 gi|407465757|ref|YP_006776639.1| - 0.13 12.1 0.0 0.19 11.6 0.0 1.4 1 1 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_16 PF13191.6 gi|407465757|ref|YP_006776639.1| - 0.14 12.5 0.2 0.23 11.8 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain LigT_PEase PF02834.16 gi|407465758|ref|YP_006776640.1| - 2.1e-24 85.5 0.0 3.8e-14 52.6 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase AKAP7_NLS PF10469.9 gi|407465758|ref|YP_006776640.1| - 3.6e-12 46.6 0.0 6.3e-12 45.8 0.0 1.4 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain 2_5_RNA_ligase2 PF13563.6 gi|407465758|ref|YP_006776640.1| - 2.7e-08 33.8 0.0 3.2e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily tRNA_NucTransf2 PF09249.11 gi|407465759|ref|YP_006776641.1| - 9.9e-37 125.7 0.1 2.5e-36 124.4 0.1 1.7 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|407465759|ref|YP_006776641.1| - 5e-10 39.5 1.0 3.5e-09 36.9 0.3 2.5 2 0 0 2 2 2 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|407465759|ref|YP_006776641.1| - 5.9e-05 23.1 0.3 0.00018 21.5 0.3 1.9 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase CdiI PF07262.11 gi|407465759|ref|YP_006776641.1| - 0.0012 18.6 7.6 0.16 11.8 2.1 2.5 2 0 0 2 2 2 2 CDI immunity protein SMODS PF18144.1 gi|407465759|ref|YP_006776641.1| - 0.0043 17.2 1.1 0.0095 16.1 1.1 1.6 1 0 0 1 1 1 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain RIO1 PF01163.22 gi|407465760|ref|YP_006776642.1| - 2.3e-07 30.6 0.5 3.7e-07 29.9 0.0 1.6 2 0 0 2 2 2 1 RIO1 family Pkinase PF00069.25 gi|407465760|ref|YP_006776642.1| - 1.4e-06 27.9 0.9 1.4e-06 27.9 0.9 1.7 1 1 1 2 2 2 1 Protein kinase domain Choline_kinase PF01633.20 gi|407465760|ref|YP_006776642.1| - 0.0005 19.7 0.9 0.0027 17.3 0.9 2.4 1 1 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 gi|407465760|ref|YP_006776642.1| - 0.069 13.1 0.0 0.13 12.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family EPO_TPO PF00758.18 gi|407465760|ref|YP_006776642.1| - 0.11 12.6 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Erythropoietin/thrombopoietin His_Me_b4a2 PF18275.1 gi|407465761|ref|YP_006776643.1| - 0.0051 16.8 1.6 0.0089 16.1 1.6 1.5 1 0 0 1 1 1 1 His-Me finger endonuclease beta4-alpha2 domain Pyr_redox_2 PF07992.14 gi|407465762|ref|YP_006776644.1| - 2.2e-21 76.4 0.0 2.7e-12 46.5 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|407465762|ref|YP_006776644.1| - 9.7e-07 29.3 0.3 0.0012 19.4 0.1 3.1 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|407465762|ref|YP_006776644.1| - 0.0017 18.5 0.0 0.0035 17.6 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 gi|407465762|ref|YP_006776644.1| - 0.0034 16.3 0.0 0.0051 15.7 0.0 1.2 1 0 0 1 1 1 1 Tryptophan halogenase NAD_binding_9 PF13454.6 gi|407465762|ref|YP_006776644.1| - 0.0061 16.6 0.0 0.026 14.5 0.0 1.9 2 0 0 2 2 2 1 FAD-NAD(P)-binding DAO PF01266.24 gi|407465762|ref|YP_006776644.1| - 0.0068 16.0 0.0 0.015 14.9 0.0 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|407465762|ref|YP_006776644.1| - 0.01 15.0 0.0 0.31 10.1 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain FAD_binding_3 PF01494.19 gi|407465762|ref|YP_006776644.1| - 0.23 10.7 0.0 0.35 10.1 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain adh_short PF00106.25 gi|407465763|ref|YP_006776645.1| - 4.2e-61 205.8 0.5 6.3e-61 205.3 0.5 1.3 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|407465763|ref|YP_006776645.1| - 7.2e-46 156.6 0.8 8.6e-46 156.4 0.8 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|407465763|ref|YP_006776645.1| - 2.6e-13 50.3 0.3 3.6e-13 49.8 0.3 1.2 1 0 0 1 1 1 1 KR domain Eno-Rase_NADH_b PF12242.8 gi|407465763|ref|YP_006776645.1| - 0.022 14.5 0.9 0.055 13.2 0.9 1.6 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Epimerase PF01370.21 gi|407465763|ref|YP_006776645.1| - 0.031 13.7 0.2 0.5 9.8 0.1 2.6 1 1 1 2 2 2 0 NAD dependent epimerase/dehydratase family zf-AN1 PF01428.16 gi|407465764|ref|YP_006776646.1| - 7.2e-12 45.3 7.7 9.8e-12 44.8 7.7 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger PSI_integrin PF17205.3 gi|407465764|ref|YP_006776646.1| - 0.036 13.8 5.4 3.7 7.4 5.4 2.2 1 1 0 1 1 1 0 Integrin plexin domain RecR PF02132.15 gi|407465764|ref|YP_006776646.1| - 0.039 13.5 1.3 0.065 12.8 1.3 1.4 1 0 0 1 1 1 0 RecR protein Transp_Tc5_C PF04236.15 gi|407465764|ref|YP_006776646.1| - 0.14 12.5 4.8 0.37 11.2 4.8 1.7 1 1 0 1 1 1 0 Tc5 transposase C-terminal domain CLN6 PF15156.6 gi|407465765|ref|YP_006776647.1| - 0.0033 16.7 0.3 0.0038 16.6 0.3 1.1 1 0 0 1 1 1 1 Ceroid-lipofuscinosis neuronal protein 6 B12D PF06522.11 gi|407465765|ref|YP_006776647.1| - 0.036 13.8 0.0 0.089 12.6 0.0 1.7 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Npun_R1517 PF18068.1 gi|407465766|ref|YP_006776648.1| - 0.051 13.9 0.7 0.2 12.0 0.3 2.1 1 1 1 2 2 2 0 Npun R1517 BOP1NT PF08145.12 gi|407465766|ref|YP_006776648.1| - 0.06 13.3 0.6 0.077 12.9 0.6 1.1 1 0 0 1 1 1 0 BOP1NT (NUC169) domain Bac_DNA_binding PF00216.21 gi|407465766|ref|YP_006776648.1| - 0.12 12.6 1.9 0.19 11.9 0.2 2.0 2 1 0 2 2 2 0 Bacterial DNA-binding protein Gln-synt_C PF00120.24 gi|407465767|ref|YP_006776649.1| - 3.6e-114 381.3 0.0 4.3e-114 381.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|407465767|ref|YP_006776649.1| - 1.7e-26 91.8 0.0 3.6e-26 90.7 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain RseC_MucC PF04246.12 gi|407465768|ref|YP_006776650.1| - 6.5 6.7 5.8 3.4 7.6 4.0 1.5 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Cpn60_TCP1 PF00118.24 gi|407465769|ref|YP_006776651.1| - 2.3e-179 597.1 22.1 2.6e-179 596.9 22.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Dak2 PF02734.17 gi|407465769|ref|YP_006776651.1| - 0.00079 19.4 5.1 0.024 14.5 1.3 2.6 2 0 0 2 2 2 2 DAK2 domain Ustilago_mating PF05722.12 gi|407465769|ref|YP_006776651.1| - 0.092 12.3 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 Ustilago B locus mating-type protein SHMT PF00464.19 gi|407465770|ref|YP_006776652.1| - 3.8e-78 262.9 0.0 5.1e-78 262.4 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|407465770|ref|YP_006776652.1| - 9.7e-08 31.6 0.1 5.4e-07 29.1 0.1 2.1 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|407465770|ref|YP_006776652.1| - 1.4e-06 27.8 0.0 2.5e-06 27.0 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|407465770|ref|YP_006776652.1| - 0.00014 21.0 0.1 0.00025 20.1 0.1 1.6 1 1 0 1 1 1 1 Aminotransferase class-V SelA PF03841.13 gi|407465770|ref|YP_006776652.1| - 0.00028 20.0 0.0 0.0005 19.2 0.0 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase PcrB PF01884.17 gi|407465771|ref|YP_006776653.1| - 5.8e-52 176.4 0.1 7.4e-52 176.0 0.1 1.0 1 0 0 1 1 1 1 PcrB family IMPDH PF00478.25 gi|407465771|ref|YP_006776653.1| - 5.7e-08 32.1 0.1 7.3e-08 31.8 0.1 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.21 gi|407465771|ref|YP_006776653.1| - 5.9e-08 32.5 0.2 5e-07 29.4 0.0 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein B12-binding PF02310.19 gi|407465771|ref|YP_006776653.1| - 0.00039 20.4 0.2 0.47 10.5 0.0 3.3 3 1 0 3 3 3 1 B12 binding domain BtpA PF03437.15 gi|407465771|ref|YP_006776653.1| - 0.0072 15.8 1.6 0.13 11.7 0.3 2.1 2 0 0 2 2 2 1 BtpA family Ribul_P_3_epim PF00834.19 gi|407465771|ref|YP_006776653.1| - 0.01 15.2 0.1 0.041 13.3 0.1 1.8 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family IGPS PF00218.21 gi|407465771|ref|YP_006776653.1| - 0.014 14.5 0.1 0.21 10.7 0.0 2.3 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase ThiG PF05690.14 gi|407465771|ref|YP_006776653.1| - 0.016 14.6 0.4 1.3 8.2 0.0 2.2 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG Trp_syntA PF00290.20 gi|407465771|ref|YP_006776653.1| - 0.017 14.0 1.1 0.12 11.2 0.1 2.4 2 1 1 3 3 3 0 Tryptophan synthase alpha chain TMP-TENI PF02581.17 gi|407465771|ref|YP_006776653.1| - 0.024 14.0 0.1 0.19 11.0 0.0 2.1 2 0 0 2 2 2 0 Thiamine monophosphate synthase G3P_antiterm PF04309.12 gi|407465771|ref|YP_006776653.1| - 0.034 13.6 1.1 0.12 11.8 0.1 2.3 2 1 1 3 3 3 0 Glycerol-3-phosphate responsive antiterminator Dus PF01207.17 gi|407465771|ref|YP_006776653.1| - 0.076 12.1 0.0 0.85 8.7 0.0 2.0 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) Peripla_BP_1 PF00532.21 gi|407465771|ref|YP_006776653.1| - 0.08 12.4 0.2 0.69 9.3 0.0 2.1 2 0 0 2 2 2 0 Periplasmic binding proteins and sugar binding domain of LacI family DpaA_N PF16924.5 gi|407465771|ref|YP_006776653.1| - 0.16 12.1 0.4 1.7 8.8 0.1 2.3 2 0 0 2 2 2 0 Dipicolinate synthase subunit A N-terminal domain FliH PF02108.16 gi|407465772|ref|YP_006776654.1| - 0.088 12.9 0.1 0.23 11.5 0.0 1.6 2 0 0 2 2 2 0 Flagellar assembly protein FliH HTH_27 PF13463.6 gi|407465773|ref|YP_006776655.1| - 3.3e-06 27.5 0.0 5.3e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|407465773|ref|YP_006776655.1| - 0.0004 20.2 1.2 0.00099 18.9 0.1 2.1 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|407465773|ref|YP_006776655.1| - 0.0076 16.4 0.2 0.018 15.2 0.2 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain Replic_Relax PF13814.6 gi|407465773|ref|YP_006776655.1| - 0.0087 16.1 0.0 0.014 15.5 0.0 1.3 1 0 0 1 1 1 1 Replication-relaxation IMCp PF12314.8 gi|407465773|ref|YP_006776655.1| - 0.019 15.3 3.6 0.038 14.3 3.6 1.5 1 0 0 1 1 1 0 Inner membrane complex protein Rrf2 PF02082.20 gi|407465773|ref|YP_006776655.1| - 0.064 13.6 0.5 0.73 10.2 0.0 2.2 2 0 0 2 2 2 0 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|407465773|ref|YP_006776655.1| - 0.071 13.1 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain O-antigen_lig PF13425.6 gi|407465773|ref|YP_006776655.1| - 0.077 11.8 0.3 0.12 11.2 0.3 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein MAGE PF01454.19 gi|407465773|ref|YP_006776655.1| - 0.097 12.4 1.7 0.89 9.2 0.2 2.1 2 0 0 2 2 2 0 MAGE family DUF3116 PF11313.8 gi|407465773|ref|YP_006776655.1| - 0.099 12.5 2.3 0.51 10.2 0.7 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3116) Penicillinase_R PF03965.16 gi|407465773|ref|YP_006776655.1| - 0.17 12.2 1.9 0.48 10.8 0.3 2.1 2 0 0 2 2 2 0 Penicillinase repressor MarR PF01047.22 gi|407465773|ref|YP_006776655.1| - 0.22 11.5 1.2 0.29 11.1 0.1 1.7 2 0 0 2 2 2 0 MarR family MazE_antitoxin PF04014.18 gi|407465774|ref|YP_006776656.1| - 9.4e-07 28.6 0.1 1.1e-06 28.4 0.1 1.1 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin Rubredoxin_C PF18267.1 gi|407465774|ref|YP_006776656.1| - 0.0062 16.4 0.1 0.0078 16.1 0.1 1.1 1 0 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain eIF-1a PF01176.19 gi|407465774|ref|YP_006776656.1| - 0.013 15.3 0.1 0.022 14.5 0.1 1.5 1 1 0 1 1 1 0 Translation initiation factor 1A / IF-1 AbrB-like PF14250.6 gi|407465774|ref|YP_006776656.1| - 0.1 12.7 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 AbrB-like transcriptional regulator MraZ PF02381.18 gi|407465774|ref|YP_006776656.1| - 0.18 11.8 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Penicillinase_R PF03965.16 gi|407465775|ref|YP_006776657.1| - 0.00058 20.2 0.1 0.00082 19.7 0.1 1.3 1 0 0 1 1 1 1 Penicillinase repressor Cdc6_C PF09079.11 gi|407465776|ref|YP_006776658.1| - 1.1e-15 57.4 0.3 2.7e-15 56.1 0.3 1.7 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|407465776|ref|YP_006776658.1| - 6.9e-12 45.8 0.4 2.9e-11 43.8 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|407465776|ref|YP_006776658.1| - 1.6e-09 38.3 0.6 1.2e-08 35.5 0.6 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|407465776|ref|YP_006776658.1| - 1.4e-08 35.3 0.8 6.7e-08 33.1 0.2 2.3 2 1 0 2 2 1 1 AAA ATPase domain TniB PF05621.11 gi|407465776|ref|YP_006776658.1| - 6.5e-07 28.9 0.1 1.1e-06 28.1 0.1 1.4 1 0 0 1 1 1 1 Bacterial TniB protein NACHT PF05729.12 gi|407465776|ref|YP_006776658.1| - 2e-06 27.8 0.0 3.3e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 NACHT domain ATPase_2 PF01637.18 gi|407465776|ref|YP_006776658.1| - 2.1e-05 24.6 2.3 2.1e-05 24.6 2.3 2.2 1 1 0 2 2 2 1 ATPase domain predominantly from Archaea DUF2075 PF09848.9 gi|407465776|ref|YP_006776658.1| - 6.8e-05 22.3 0.1 8.4e-05 22.0 0.1 1.4 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_5 PF07728.14 gi|407465776|ref|YP_006776658.1| - 0.00012 22.1 0.2 0.00036 20.5 0.2 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TIP49_C PF17856.1 gi|407465776|ref|YP_006776658.1| - 0.00033 20.7 0.1 0.00095 19.3 0.1 1.8 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA_assoc_2 PF16193.5 gi|407465776|ref|YP_006776658.1| - 0.00035 20.9 0.2 0.001 19.3 0.2 1.8 1 0 0 1 1 1 1 AAA C-terminal domain NB-ARC PF00931.22 gi|407465776|ref|YP_006776658.1| - 0.00049 19.4 0.0 0.0011 18.2 0.0 1.6 1 0 0 1 1 1 1 NB-ARC domain PIF1 PF05970.14 gi|407465776|ref|YP_006776658.1| - 0.00056 19.2 0.0 0.0012 18.1 0.0 1.5 1 0 0 1 1 1 1 PIF1-like helicase AAA_7 PF12775.7 gi|407465776|ref|YP_006776658.1| - 0.00074 19.1 0.0 0.003 17.1 0.0 2.0 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_19 PF13245.6 gi|407465776|ref|YP_006776658.1| - 0.0009 19.6 0.1 0.0032 17.8 0.1 2.0 1 1 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|407465776|ref|YP_006776658.1| - 0.0019 17.4 0.0 0.0041 16.3 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_32 PF13654.6 gi|407465776|ref|YP_006776658.1| - 0.0023 16.8 0.5 0.26 10.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 gi|407465776|ref|YP_006776658.1| - 0.004 17.0 0.9 0.023 14.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain KAP_NTPase PF07693.14 gi|407465776|ref|YP_006776658.1| - 0.0044 16.3 0.9 0.49 9.6 0.0 2.5 1 1 0 2 2 2 1 KAP family P-loop domain ResIII PF04851.15 gi|407465776|ref|YP_006776658.1| - 0.0059 16.6 0.5 0.2 11.6 0.0 2.8 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit RNA_helicase PF00910.22 gi|407465776|ref|YP_006776658.1| - 0.006 17.0 0.0 0.017 15.5 0.0 1.8 1 0 0 1 1 1 1 RNA helicase HTH_36 PF13730.6 gi|407465776|ref|YP_006776658.1| - 0.0062 16.5 0.0 0.028 14.4 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain TrwB_AAD_bind PF10412.9 gi|407465776|ref|YP_006776658.1| - 0.012 14.5 0.0 0.054 12.4 0.0 1.9 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain NTPase_1 PF03266.15 gi|407465776|ref|YP_006776658.1| - 0.017 15.1 0.2 0.16 11.8 0.1 2.4 2 0 0 2 2 2 0 NTPase Mg_chelatase PF01078.21 gi|407465776|ref|YP_006776658.1| - 0.02 14.3 0.0 0.052 12.9 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI UvrD-helicase PF00580.21 gi|407465776|ref|YP_006776658.1| - 0.04 13.4 0.6 0.86 9.1 0.0 2.2 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain Rad17 PF03215.15 gi|407465776|ref|YP_006776658.1| - 0.044 13.7 0.2 0.11 12.4 0.1 1.7 2 0 0 2 2 1 0 Rad17 P-loop domain DUF512 PF04459.12 gi|407465776|ref|YP_006776658.1| - 0.044 13.0 0.1 0.17 11.2 0.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF512) TsaE PF02367.17 gi|407465776|ref|YP_006776658.1| - 0.049 13.6 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|407465776|ref|YP_006776658.1| - 0.058 13.1 0.3 0.15 11.8 0.0 1.8 2 0 0 2 2 1 0 AAA domain Sigma54_activat PF00158.26 gi|407465776|ref|YP_006776658.1| - 0.068 12.9 0.0 0.19 11.4 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain ATPase PF06745.13 gi|407465776|ref|YP_006776658.1| - 0.19 11.0 3.6 0.33 10.3 0.1 2.7 3 1 1 4 4 3 0 KaiC Tfb5 PF06331.12 gi|407465776|ref|YP_006776658.1| - 0.55 10.3 4.3 21 5.2 0.2 3.2 3 0 0 3 3 3 0 Transcription factor TFIIH complex subunit Tfb5 DNA_pol_E_B PF04042.16 gi|407465777|ref|YP_006776659.1| - 1.1e-21 77.2 0.0 2.1e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos PF00149.28 gi|407465777|ref|YP_006776659.1| - 2e-13 51.3 0.0 3.6e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|407465777|ref|YP_006776659.1| - 7.1e-08 32.8 0.0 1.9e-07 31.4 0.0 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain tRNA_anti-codon PF01336.25 gi|407465777|ref|YP_006776659.1| - 0.0044 17.0 0.0 0.0096 15.9 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain SpoIIM PF01944.17 gi|407465778|ref|YP_006776660.1| - 2.4e-05 24.4 12.4 3.1e-05 24.1 12.4 1.2 1 0 0 1 1 1 1 Stage II sporulation protein M TP_methylase PF00590.20 gi|407465780|ref|YP_006776662.1| - 1.6e-36 126.3 0.0 1.8e-36 126.1 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases MMR_HSR1_Xtn PF16897.5 gi|407465780|ref|YP_006776662.1| - 0.024 14.7 2.1 0.038 14.0 0.7 2.0 2 1 0 2 2 2 0 C-terminal region of MMR_HSR1 domain bPH_3 PF14470.6 gi|407465781|ref|YP_006776663.1| - 0.0032 17.8 0.3 2.1 8.7 0.0 2.6 2 1 0 2 2 2 2 Bacterial PH domain Pro_isomerase PF00160.21 gi|407465782|ref|YP_006776664.1| - 5.7e-48 163.2 0.1 8.7e-48 162.6 0.1 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PsbP PF01789.16 gi|407465782|ref|YP_006776664.1| - 0.00067 19.8 1.5 0.0025 17.9 1.5 1.9 1 1 0 1 1 1 1 PsbP Pyr_redox_2 PF07992.14 gi|407465783|ref|YP_006776665.1| - 1.2e-48 165.9 0.0 1.5e-48 165.5 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|407465783|ref|YP_006776665.1| - 3.8e-17 62.6 0.5 5.7e-11 42.8 0.1 3.3 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|407465783|ref|YP_006776665.1| - 1.3e-07 31.5 0.0 0.36 10.4 0.0 4.0 4 0 0 4 4 4 3 FAD dependent oxidoreductase GIDA PF01134.22 gi|407465783|ref|YP_006776665.1| - 0.0051 16.0 0.1 1.7 7.6 0.0 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A DUF4743 PF15916.5 gi|407465783|ref|YP_006776665.1| - 0.0075 16.2 0.0 0.037 14.0 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4743) Lycopene_cycl PF05834.12 gi|407465783|ref|YP_006776665.1| - 0.011 14.8 0.0 2.6 7.0 0.0 2.4 2 0 0 2 2 2 0 Lycopene cyclase protein ThuA PF06283.11 gi|407465783|ref|YP_006776665.1| - 0.022 14.9 0.1 0.1 12.8 0.0 1.9 2 0 0 2 2 2 0 Trehalose utilisation Pyr_redox_3 PF13738.6 gi|407465783|ref|YP_006776665.1| - 0.037 13.3 0.9 0.9 8.7 0.1 2.6 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|407465783|ref|YP_006776665.1| - 0.12 11.5 0.0 0.86 8.7 0.0 2.1 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|407465783|ref|YP_006776665.1| - 0.14 12.2 0.5 18 5.3 0.1 3.2 4 0 0 4 4 4 0 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|407465783|ref|YP_006776665.1| - 0.14 12.4 0.0 13 6.2 0.0 2.5 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|407465783|ref|YP_006776665.1| - 0.33 10.2 1.0 13 5.0 0.0 2.9 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain ACT_7 PF13840.6 gi|407465784|ref|YP_006776666.1| - 0.00016 21.4 0.1 0.00028 20.6 0.1 1.4 1 0 0 1 1 1 1 ACT domain SecD-TM1 PF13721.6 gi|407465784|ref|YP_006776666.1| - 0.026 15.0 0.1 0.091 13.2 0.0 1.8 2 0 0 2 2 2 0 SecD export protein N-terminal TM region Glyco_hydro_125 PF06824.11 gi|407465784|ref|YP_006776666.1| - 0.061 12.2 0.0 0.075 11.9 0.0 1.1 1 0 0 1 1 1 0 Metal-independent alpha-mannosidase (GH125) HSP20 PF00011.21 gi|407465785|ref|YP_006776667.1| - 1.2e-07 31.8 5.6 2e-06 27.9 5.6 2.1 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|407465785|ref|YP_006776667.1| - 2.7e-05 23.6 0.1 4.7e-05 22.9 0.1 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA PIH1_CS PF18201.1 gi|407465785|ref|YP_006776667.1| - 0.0026 18.1 0.2 0.0035 17.7 0.2 1.2 1 0 0 1 1 1 1 PIH1 CS-like domain AAA PF00004.29 gi|407465786|ref|YP_006776668.1| - 5.4e-100 331.0 0.0 8e-50 168.7 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|407465786|ref|YP_006776668.1| - 2.6e-24 84.7 2.7 1.9e-11 43.6 0.2 2.9 3 0 0 3 3 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|407465786|ref|YP_006776668.1| - 3.9e-23 81.4 0.0 1.2e-22 79.8 0.0 2.0 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.14 gi|407465786|ref|YP_006776668.1| - 3.9e-17 62.9 0.1 6.2e-08 33.0 0.0 2.8 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|407465786|ref|YP_006776668.1| - 8e-16 58.9 0.0 5.5e-07 30.1 0.0 3.4 2 1 1 3 3 3 2 AAA ATPase domain RuvB_N PF05496.12 gi|407465786|ref|YP_006776668.1| - 9.5e-15 54.7 0.0 4.6e-08 33.0 0.0 2.9 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|407465786|ref|YP_006776668.1| - 1.1e-13 51.3 1.0 9e-06 25.7 0.1 3.7 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) CDC48_2 PF02933.17 gi|407465786|ref|YP_006776668.1| - 2.1e-11 43.4 0.1 4.8e-11 42.3 0.1 1.7 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_33 PF13671.6 gi|407465786|ref|YP_006776668.1| - 1.8e-10 41.1 0.0 0.00012 22.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|407465786|ref|YP_006776668.1| - 2.5e-10 40.8 2.6 0.0066 16.7 0.0 4.3 2 2 2 4 4 4 2 AAA domain TIP49 PF06068.13 gi|407465786|ref|YP_006776668.1| - 2.8e-10 39.9 0.0 0.00047 19.5 0.0 2.6 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_14 PF13173.6 gi|407465786|ref|YP_006776668.1| - 3.7e-09 36.7 0.0 0.00057 19.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|407465786|ref|YP_006776668.1| - 4.1e-08 33.9 0.0 0.0019 18.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|407465786|ref|YP_006776668.1| - 9.6e-08 32.0 0.0 0.018 14.8 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|407465786|ref|YP_006776668.1| - 2e-07 30.6 0.9 0.016 14.6 0.1 2.7 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|407465786|ref|YP_006776668.1| - 4.1e-07 29.8 0.4 0.13 11.9 0.0 4.1 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_24 PF13479.6 gi|407465786|ref|YP_006776668.1| - 5.7e-07 29.5 0.0 0.0062 16.3 0.0 2.6 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|407465786|ref|YP_006776668.1| - 1.2e-06 28.8 0.0 0.065 13.6 0.0 2.7 2 0 0 2 2 2 2 RNA helicase Zeta_toxin PF06414.12 gi|407465786|ref|YP_006776668.1| - 1.5e-06 27.6 0.1 0.018 14.3 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin AAA_7 PF12775.7 gi|407465786|ref|YP_006776668.1| - 2.5e-06 27.1 0.1 0.09 12.3 0.0 2.8 3 0 0 3 3 2 2 P-loop containing dynein motor region AAA_3 PF07726.11 gi|407465786|ref|YP_006776668.1| - 3.5e-06 26.9 0.0 0.033 14.1 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|407465786|ref|YP_006776668.1| - 5.8e-06 26.9 0.0 0.23 12.0 0.0 2.8 2 0 0 2 2 2 2 ABC transporter AAA_28 PF13521.6 gi|407465786|ref|YP_006776668.1| - 9.2e-06 26.0 0.1 0.16 12.2 0.0 2.4 2 0 0 2 2 2 2 AAA domain DUF815 PF05673.13 gi|407465786|ref|YP_006776668.1| - 2.4e-05 23.6 0.0 0.21 10.7 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF815) TsaE PF02367.17 gi|407465786|ref|YP_006776668.1| - 4.9e-05 23.3 0.1 0.33 10.9 0.0 2.6 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 gi|407465786|ref|YP_006776668.1| - 6.4e-05 22.7 0.5 0.14 11.8 0.0 3.0 3 0 0 3 3 2 2 AAA domain AAA_25 PF13481.6 gi|407465786|ref|YP_006776668.1| - 7.6e-05 22.4 3.6 1.2 8.7 0.2 3.6 2 2 1 3 3 3 2 AAA domain AAA_11 PF13086.6 gi|407465786|ref|YP_006776668.1| - 8.2e-05 22.5 2.0 0.09 12.5 0.2 2.8 3 1 0 3 3 2 2 AAA domain Parvo_NS1 PF01057.17 gi|407465786|ref|YP_006776668.1| - 9e-05 21.7 0.1 0.19 10.8 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 PhoH PF02562.16 gi|407465786|ref|YP_006776668.1| - 0.00014 21.4 0.2 0.5 9.8 0.1 2.8 2 0 0 2 2 2 2 PhoH-like protein NACHT PF05729.12 gi|407465786|ref|YP_006776668.1| - 0.00014 21.8 0.8 2.5 8.0 0.1 3.9 3 1 1 4 4 3 1 NACHT domain Vps4_C PF09336.10 gi|407465786|ref|YP_006776668.1| - 0.00061 19.7 1.0 0.17 11.9 0.1 2.9 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain Sigma54_activ_2 PF14532.6 gi|407465786|ref|YP_006776668.1| - 0.00064 19.8 0.0 0.68 10.0 0.0 2.8 2 0 0 2 2 2 1 Sigma-54 interaction domain DUF2075 PF09848.9 gi|407465786|ref|YP_006776668.1| - 0.00084 18.7 0.1 0.95 8.6 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_17 PF13207.6 gi|407465786|ref|YP_006776668.1| - 0.0022 18.4 0.0 2.2 8.7 0.0 2.8 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|407465786|ref|YP_006776668.1| - 0.0045 17.3 4.4 1.5 9.1 0.0 3.8 5 0 0 5 5 2 1 AAA domain NB-ARC PF00931.22 gi|407465786|ref|YP_006776668.1| - 0.0048 16.1 0.1 3.2 6.8 0.0 2.6 2 0 0 2 2 2 0 NB-ARC domain TniB PF05621.11 gi|407465786|ref|YP_006776668.1| - 0.005 16.3 0.2 2.6 7.4 0.0 3.3 4 0 0 4 4 2 1 Bacterial TniB protein ResIII PF04851.15 gi|407465786|ref|YP_006776668.1| - 0.0051 16.8 0.0 0.73 9.8 0.0 2.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit NTPase_1 PF03266.15 gi|407465786|ref|YP_006776668.1| - 0.0053 16.7 2.9 3.1 7.7 0.0 4.2 3 1 1 4 4 4 1 NTPase CPT PF07931.12 gi|407465786|ref|YP_006776668.1| - 0.0064 16.4 0.1 0.28 11.0 0.0 2.6 2 1 1 3 3 2 1 Chloramphenicol phosphotransferase-like protein Rad17 PF03215.15 gi|407465786|ref|YP_006776668.1| - 0.012 15.6 0.2 1.1 9.1 0.0 2.8 2 2 0 2 2 2 0 Rad17 P-loop domain Hydin_ADK PF17213.3 gi|407465786|ref|YP_006776668.1| - 0.013 15.8 0.5 0.16 12.3 0.0 2.4 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain T2SSE PF00437.20 gi|407465786|ref|YP_006776668.1| - 0.014 14.4 0.0 4.5 6.2 0.0 2.7 2 0 0 2 2 2 0 Type II/IV secretion system protein Bac_DnaA PF00308.18 gi|407465786|ref|YP_006776668.1| - 0.015 15.2 0.0 3.2 7.5 0.0 3.1 2 1 1 3 3 2 0 Bacterial dnaA protein Viral_helicase1 PF01443.18 gi|407465786|ref|YP_006776668.1| - 0.018 14.8 0.0 0.19 11.5 0.0 2.5 3 0 0 3 3 2 0 Viral (Superfamily 1) RNA helicase LID PF17916.1 gi|407465786|ref|YP_006776668.1| - 0.018 14.6 0.2 0.04 13.6 0.2 1.5 1 0 0 1 1 1 0 LIM interaction domain (LID) Guanylate_kin PF00625.21 gi|407465786|ref|YP_006776668.1| - 0.022 14.5 0.8 19 4.9 0.0 4.1 3 1 1 4 4 4 0 Guanylate kinase SKI PF01202.22 gi|407465786|ref|YP_006776668.1| - 0.025 14.7 0.1 5.7 7.0 0.0 2.7 2 0 0 2 2 2 0 Shikimate kinase PIF1 PF05970.14 gi|407465786|ref|YP_006776668.1| - 0.027 13.6 0.0 3 6.9 0.0 2.8 3 0 0 3 3 2 0 PIF1-like helicase Cytidylate_kin PF02224.18 gi|407465786|ref|YP_006776668.1| - 0.035 13.8 4.3 5 6.8 0.0 3.4 4 0 0 4 4 3 0 Cytidylate kinase IPT PF01745.16 gi|407465786|ref|YP_006776668.1| - 0.036 13.4 0.3 5.6 6.3 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase Torsin PF06309.11 gi|407465786|ref|YP_006776668.1| - 0.055 13.6 0.1 2.7 8.1 0.0 2.8 2 0 0 2 2 2 0 Torsin AFG1_ATPase PF03969.16 gi|407465786|ref|YP_006776668.1| - 0.056 12.3 0.0 5.8 5.7 0.0 2.3 2 0 0 2 2 2 0 AFG1-like ATPase ATPase PF06745.13 gi|407465786|ref|YP_006776668.1| - 0.071 12.4 10.7 0.41 9.9 0.1 3.9 4 1 1 5 5 3 0 KaiC ATPase_2 PF01637.18 gi|407465786|ref|YP_006776668.1| - 0.19 11.6 2.7 1.7 8.5 0.1 3.3 3 2 1 4 4 3 0 ATPase domain predominantly from Archaea EF-G-binding_N PF07299.11 gi|407465786|ref|YP_006776668.1| - 0.22 12.0 4.9 27 5.4 0.6 4.1 4 0 0 4 4 3 0 Elongation factor G-binding protein, N-terminal Evr1_Alr PF04777.13 gi|407465787|ref|YP_006776669.1| - 0.011 16.1 0.1 0.012 16.1 0.1 1.1 1 0 0 1 1 1 0 Erv1 / Alr family dCMP_cyt_deam_1 PF00383.23 gi|407465787|ref|YP_006776669.1| - 0.051 13.5 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region Pox_vIL-18BP PF05566.12 gi|407465787|ref|YP_006776669.1| - 0.054 13.7 0.0 0.061 13.6 0.0 1.1 1 0 0 1 1 1 0 Orthopoxvirus interleukin 18 binding protein Terminase_3 PF04466.13 gi|407465787|ref|YP_006776669.1| - 0.1 12.1 0.2 0.1 12.1 0.2 1.0 1 0 0 1 1 1 0 Phage terminase large subunit Leu_zip PF15294.6 gi|407465788|ref|YP_006776670.1| - 2.5e-06 27.2 1.4 3e-06 26.9 1.4 1.1 1 0 0 1 1 1 1 Leucine zipper Spc7 PF08317.11 gi|407465788|ref|YP_006776670.1| - 4.3e-05 22.5 5.9 5.8e-05 22.1 5.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 gi|407465788|ref|YP_006776670.1| - 0.00011 22.7 1.0 0.00012 22.6 1.0 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region UPF0242 PF06785.11 gi|407465788|ref|YP_006776670.1| - 0.00011 22.3 0.4 0.00014 22.1 0.4 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DivIC PF04977.15 gi|407465788|ref|YP_006776670.1| - 0.00028 20.6 9.6 0.00036 20.2 4.3 2.2 1 1 1 2 2 2 1 Septum formation initiator ZapB PF06005.12 gi|407465788|ref|YP_006776670.1| - 0.00044 20.6 17.8 0.0059 17.0 8.0 2.1 1 1 1 2 2 2 2 Cell division protein ZapB TonB_N PF16031.5 gi|407465788|ref|YP_006776670.1| - 0.00053 20.5 10.8 0.00066 20.2 10.8 1.1 1 0 0 1 1 1 1 TonB polyproline region ATG16 PF08614.11 gi|407465788|ref|YP_006776670.1| - 0.00057 20.2 0.2 0.00073 19.8 0.2 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) BRE1 PF08647.11 gi|407465788|ref|YP_006776670.1| - 0.00086 19.3 9.3 0.0012 18.9 9.3 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Orthopox_A5L PF06193.11 gi|407465788|ref|YP_006776670.1| - 0.0017 17.9 2.9 0.0017 17.9 2.9 2.0 1 1 2 3 3 3 1 Orthopoxvirus A5L protein-like ADIP PF11559.8 gi|407465788|ref|YP_006776670.1| - 0.0024 18.0 7.7 0.0032 17.6 7.7 1.2 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF4763 PF15960.5 gi|407465788|ref|YP_006776670.1| - 0.0028 17.0 0.1 0.0032 16.8 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) HALZ PF02183.18 gi|407465788|ref|YP_006776670.1| - 0.0029 17.8 6.5 0.045 14.0 1.0 2.4 1 1 1 2 2 2 2 Homeobox associated leucine zipper DUF4988 PF16378.5 gi|407465788|ref|YP_006776670.1| - 0.0066 16.1 2.4 0.012 15.3 2.4 1.4 1 0 0 1 1 1 1 Domain of unknown function Tropomyosin_1 PF12718.7 gi|407465788|ref|YP_006776670.1| - 0.0078 16.4 6.6 0.01 16.0 6.6 1.1 1 0 0 1 1 1 1 Tropomyosin like DUF4164 PF13747.6 gi|407465788|ref|YP_006776670.1| - 0.0097 16.2 4.9 0.019 15.2 4.9 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) HOOK PF05622.12 gi|407465788|ref|YP_006776670.1| - 0.0098 14.1 5.0 0.012 13.8 5.0 1.0 1 0 0 1 1 1 1 HOOK protein KASH_CCD PF14662.6 gi|407465788|ref|YP_006776670.1| - 0.012 15.5 9.3 0.016 15.1 9.3 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH bZIP_1 PF00170.21 gi|407465788|ref|YP_006776670.1| - 0.015 15.4 10.4 0.095 12.8 4.1 2.3 2 1 1 3 3 2 0 bZIP transcription factor Cnn_1N PF07989.11 gi|407465788|ref|YP_006776670.1| - 0.022 14.9 7.0 0.05 13.8 6.8 1.7 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Ax_dynein_light PF10211.9 gi|407465788|ref|YP_006776670.1| - 0.034 14.1 6.3 0.047 13.6 6.3 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain bZIP_2 PF07716.15 gi|407465788|ref|YP_006776670.1| - 0.041 14.0 7.7 0.38 10.9 2.5 2.4 1 1 2 3 3 3 0 Basic region leucine zipper Csm1_N PF18504.1 gi|407465788|ref|YP_006776670.1| - 0.044 14.1 7.2 0.072 13.4 7.2 1.3 1 0 0 1 1 1 0 Csm1 N-terminal domain Spc24 PF08286.11 gi|407465788|ref|YP_006776670.1| - 0.045 14.0 5.0 0.063 13.5 5.0 1.3 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 TolA_bind_tri PF16331.5 gi|407465788|ref|YP_006776670.1| - 0.075 13.1 8.2 0.24 11.5 8.3 1.7 1 1 0 1 1 1 0 TolA binding protein trimerisation HAP1_N PF04849.13 gi|407465788|ref|YP_006776670.1| - 0.082 12.1 6.5 0.12 11.5 6.5 1.2 1 0 0 1 1 1 0 HAP1 N-terminal conserved region DUF3450 PF11932.8 gi|407465788|ref|YP_006776670.1| - 0.094 12.0 6.5 0.13 11.6 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Taxilin PF09728.9 gi|407465788|ref|YP_006776670.1| - 0.15 11.2 8.8 0.2 10.8 8.8 1.1 1 0 0 1 1 1 0 Myosin-like coiled-coil protein DUF724 PF05266.14 gi|407465788|ref|YP_006776670.1| - 0.16 11.8 4.4 0.2 11.5 4.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF5082 PF16888.5 gi|407465788|ref|YP_006776670.1| - 0.16 12.3 8.6 0.082 13.2 2.3 1.9 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) TMF_DNA_bd PF12329.8 gi|407465788|ref|YP_006776670.1| - 0.16 12.0 12.8 0.26 11.3 12.8 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding JAKMIP_CC3 PF16034.5 gi|407465788|ref|YP_006776670.1| - 0.17 11.8 6.0 0.25 11.3 6.0 1.3 1 0 0 1 1 1 0 JAKMIP CC3 domain CENP-H PF05837.12 gi|407465788|ref|YP_006776670.1| - 0.2 12.1 5.1 0.27 11.6 5.1 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) XhlA PF10779.9 gi|407465788|ref|YP_006776670.1| - 0.22 11.8 9.0 0.79 10.0 8.9 1.9 1 1 0 1 1 1 0 Haemolysin XhlA HMMR_C PF15908.5 gi|407465788|ref|YP_006776670.1| - 0.23 11.7 5.5 0.41 10.9 5.5 1.5 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal PocR PF10114.9 gi|407465788|ref|YP_006776670.1| - 0.3 10.9 2.6 0.94 9.2 2.6 1.7 1 1 0 1 1 1 0 Sensory domain found in PocR DUF1664 PF07889.12 gi|407465788|ref|YP_006776670.1| - 0.32 11.1 4.0 0.49 10.4 4.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) GrpE PF01025.19 gi|407465788|ref|YP_006776670.1| - 0.35 10.5 5.5 0.46 10.1 5.5 1.2 1 0 0 1 1 1 0 GrpE FlaC_arch PF05377.11 gi|407465788|ref|YP_006776670.1| - 0.45 10.9 6.6 1.7 9.1 6.6 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Pox_A_type_inc PF04508.12 gi|407465788|ref|YP_006776670.1| - 0.48 10.4 3.2 9.4 6.3 0.1 3.2 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat YabA PF06156.13 gi|407465788|ref|YP_006776670.1| - 0.73 10.5 6.3 1.1 10.0 5.8 1.4 1 1 0 1 1 1 0 Initiation control protein YabA Shugoshin_N PF07558.11 gi|407465788|ref|YP_006776670.1| - 0.76 9.7 10.1 0.17 11.8 2.9 2.6 1 1 2 3 3 3 0 Shugoshin N-terminal coiled-coil region LPP PF04728.13 gi|407465788|ref|YP_006776670.1| - 1.3 9.5 5.9 7.3 7.1 4.3 2.3 1 1 2 3 3 3 0 Lipoprotein leucine-zipper TraF PF13728.6 gi|407465788|ref|YP_006776670.1| - 1.4 8.7 6.5 1.9 8.2 6.5 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein TSC22 PF01166.18 gi|407465788|ref|YP_006776670.1| - 2.9 8.3 9.7 3.9 7.9 1.9 2.8 1 1 1 2 2 2 0 TSC-22/dip/bun family Swi5 PF07061.11 gi|407465788|ref|YP_006776670.1| - 4.1 7.6 8.5 31 4.7 8.5 2.0 1 1 0 1 1 1 0 Swi5 SseC PF04888.12 gi|407465788|ref|YP_006776670.1| - 5 6.6 5.3 4.3 6.8 3.9 1.5 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family TMPIT PF07851.13 gi|407465788|ref|YP_006776670.1| - 5.9 6.0 10.7 0.22 10.7 5.0 1.4 2 0 0 2 2 2 0 TMPIT-like protein EMP24_GP25L PF01105.24 gi|407465788|ref|YP_006776670.1| - 7.5 6.4 9.4 3.1 7.7 5.8 1.9 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD TFIIB PF00382.19 gi|407465789|ref|YP_006776671.1| - 8.5e-32 109.0 2.6 8.2e-15 54.6 0.3 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|407465789|ref|YP_006776671.1| - 4.5e-05 22.9 0.2 0.0001 21.8 0.2 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.23 gi|407465789|ref|YP_006776671.1| - 0.0013 18.4 0.1 0.53 10.0 0.0 2.4 1 1 0 2 2 2 2 Cyclin, N-terminal domain HTH_11 PF08279.12 gi|407465789|ref|YP_006776671.1| - 0.0033 17.3 1.2 3 7.9 0.0 2.8 3 0 0 3 3 3 2 HTH domain DNA_pol_B_thumb PF14791.6 gi|407465789|ref|YP_006776671.1| - 0.088 13.0 0.3 0.25 11.6 0.1 1.8 2 0 0 2 2 2 0 DNA polymerase beta thumb DUF1059 PF06348.11 gi|407465790|ref|YP_006776672.1| - 9.7e-05 22.5 0.0 0.00013 22.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) AAA_lid_9 PF17871.1 gi|407465790|ref|YP_006776672.1| - 0.0022 17.9 0.1 0.0028 17.6 0.1 1.1 1 0 0 1 1 1 1 AAA lid domain CRCB PF02537.15 gi|407465791|ref|YP_006776673.1| - 5.8e-18 65.0 5.8 6.9e-18 64.8 5.8 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) DUF2104 PF09877.9 gi|407465791|ref|YP_006776673.1| - 0.0084 16.4 2.6 0.017 15.3 2.6 1.7 1 1 0 1 1 1 1 Predicted membrane protein (DUF2104) GRAB PF10375.9 gi|407465792|ref|YP_006776674.1| - 0.2 11.6 0.9 0.2 11.6 0.9 1.8 2 0 0 2 2 2 0 GRIP-related Arf-binding domain Phage-tail_2 PF09096.10 gi|407465793|ref|YP_006776675.1| - 0.057 13.4 0.0 0.075 13.0 0.0 1.2 1 0 0 1 1 1 0 Baseplate structural protein, domain 2 Jas PF16135.5 gi|407465794|ref|YP_006776676.1| - 0.024 14.8 3.9 0.031 14.4 3.9 1.3 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling TFIIB PF00382.19 gi|407465796|ref|YP_006776678.1| - 2e-32 111.1 6.9 5.4e-16 58.4 0.5 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|407465796|ref|YP_006776678.1| - 2.5e-09 36.5 0.4 4.5e-09 35.7 0.4 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_11 PF08279.12 gi|407465796|ref|YP_006776678.1| - 0.0043 17.0 0.2 0.15 12.0 0.0 2.6 2 0 0 2 2 2 1 HTH domain Sigma70_r4 PF04545.16 gi|407465796|ref|YP_006776678.1| - 0.011 15.2 0.0 0.031 13.8 0.0 1.8 1 0 0 1 1 1 0 Sigma-70, region 4 zinc_ribbon_2 PF13240.6 gi|407465796|ref|YP_006776678.1| - 0.012 15.3 1.3 0.062 13.0 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain RPA_interact_C PF14768.6 gi|407465796|ref|YP_006776678.1| - 0.013 16.0 0.0 0.037 14.6 0.0 1.8 1 0 0 1 1 1 0 Replication protein A interacting C-terminal Cyclin_C PF02984.19 gi|407465796|ref|YP_006776678.1| - 0.015 15.4 0.2 1.6 8.8 0.1 2.3 1 1 1 2 2 2 0 Cyclin, C-terminal domain HTH_AsnC-type PF13404.6 gi|407465796|ref|YP_006776678.1| - 0.022 14.6 0.0 0.25 11.2 0.0 2.4 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|407465796|ref|YP_006776678.1| - 0.022 14.4 0.3 0.27 11.0 0.0 2.4 2 0 0 2 2 2 0 Sigma-70, region 4 Phage_terminase PF10668.9 gi|407465796|ref|YP_006776678.1| - 0.044 13.8 0.2 1.4 9.0 0.0 2.9 3 0 0 3 3 3 0 Phage terminase small subunit Cyclin_N PF00134.23 gi|407465796|ref|YP_006776678.1| - 0.053 13.3 0.3 0.13 12.0 0.1 1.7 2 0 0 2 2 2 0 Cyclin, N-terminal domain Baculo_ME53 PF06061.11 gi|407465796|ref|YP_006776678.1| - 0.057 12.6 0.1 0.1 11.8 0.1 1.4 1 0 0 1 1 1 0 Baculoviridae ME53 RB_B PF01857.20 gi|407465796|ref|YP_006776678.1| - 0.059 13.4 0.2 0.098 12.7 0.2 1.5 1 1 0 1 1 1 0 Retinoblastoma-associated protein B domain HTH_Tnp_ISL3 PF13542.6 gi|407465796|ref|YP_006776678.1| - 0.089 12.2 0.3 17 4.9 0.0 3.7 4 0 0 4 4 4 0 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 gi|407465796|ref|YP_006776678.1| - 0.13 12.1 1.6 0.44 10.4 0.0 2.6 3 0 0 3 3 2 0 Homeodomain-like domain zf-FPG_IleRS PF06827.14 gi|407465796|ref|YP_006776678.1| - 0.14 12.0 0.4 2.2 8.2 0.1 2.4 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Auto_anti-p27 PF06677.12 gi|407465796|ref|YP_006776678.1| - 0.15 12.2 1.4 0.28 11.4 1.4 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-ribbon_3 PF13248.6 gi|407465796|ref|YP_006776678.1| - 0.16 11.4 1.3 0.87 9.1 1.3 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zf-RRN7 PF11781.8 gi|407465796|ref|YP_006776678.1| - 0.17 11.6 0.9 0.25 11.1 0.2 1.6 2 0 0 2 2 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 A2L_zn_ribbon PF08792.10 gi|407465796|ref|YP_006776678.1| - 0.22 11.3 0.9 0.44 10.3 0.9 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain zf-CCHC_5 PF14787.6 gi|407465796|ref|YP_006776678.1| - 1.8 8.4 5.2 1 9.1 0.1 2.6 3 0 0 3 3 2 0 GAG-polyprotein viral zinc-finger Na_H_Exchanger PF00999.21 gi|407465797|ref|YP_006776679.1| - 9.2e-36 123.4 48.8 1.3e-35 123.0 48.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Hemerythrin PF01814.23 gi|407465798|ref|YP_006776680.1| - 1.8e-11 44.7 0.8 1.9e-11 44.7 0.1 1.4 2 0 0 2 2 2 1 Hemerythrin HHE cation binding domain HSBP1 PF06825.12 gi|407465798|ref|YP_006776680.1| - 0.062 13.2 0.1 0.28 11.1 0.0 2.1 2 0 0 2 2 2 0 Heat shock factor binding protein 1 TLD PF07534.16 gi|407465798|ref|YP_006776680.1| - 0.089 13.0 0.0 0.23 11.7 0.0 1.6 2 0 0 2 2 2 0 TLD APS_kinase PF01583.20 gi|407465799|ref|YP_006776681.1| - 1.2e-45 155.3 0.0 1.4e-45 155.0 0.0 1.0 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.6 gi|407465799|ref|YP_006776681.1| - 2.6e-05 24.4 0.0 3.3e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|407465799|ref|YP_006776681.1| - 0.00027 21.5 0.0 0.00046 20.7 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|407465799|ref|YP_006776681.1| - 0.0011 19.4 0.0 0.0028 18.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|407465799|ref|YP_006776681.1| - 0.0028 17.0 0.0 0.006 15.9 0.0 1.6 2 0 0 2 2 2 1 Zeta toxin KTI12 PF08433.10 gi|407465799|ref|YP_006776681.1| - 0.0071 15.8 0.0 0.0093 15.4 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Ferrochelatase PF00762.19 gi|407465799|ref|YP_006776681.1| - 0.02 14.0 0.0 0.033 13.3 0.0 1.3 1 1 0 1 1 1 0 Ferrochelatase AAA_28 PF13521.6 gi|407465799|ref|YP_006776681.1| - 0.039 14.2 0.0 0.073 13.3 0.0 1.5 2 0 0 2 2 2 0 AAA domain CPT PF07931.12 gi|407465799|ref|YP_006776681.1| - 0.06 13.2 0.1 2.8 7.7 0.1 2.4 1 1 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein Inositol_P PF00459.25 gi|407465800|ref|YP_006776682.1| - 4e-49 167.6 0.1 4.4e-49 167.4 0.1 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|407465800|ref|YP_006776682.1| - 0.0053 16.3 0.1 0.008 15.7 0.1 1.3 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain IMS_HHH PF11798.8 gi|407465800|ref|YP_006776682.1| - 0.046 14.1 0.0 0.12 12.8 0.0 1.7 1 0 0 1 1 1 0 IMS family HHH motif CRPA PF05745.11 gi|407465801|ref|YP_006776683.1| - 0.0065 16.5 1.2 0.0065 16.5 1.2 1.1 1 0 0 1 1 1 1 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) adh_short_C2 PF13561.6 gi|407465802|ref|YP_006776684.1| - 2.9e-72 243.0 0.1 3.5e-72 242.8 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|407465802|ref|YP_006776684.1| - 5.6e-63 211.9 0.4 6.6e-63 211.7 0.4 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|407465802|ref|YP_006776684.1| - 4.1e-09 36.6 0.1 5.8e-09 36.1 0.1 1.2 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 gi|407465802|ref|YP_006776684.1| - 0.0085 15.4 0.2 0.017 14.4 0.2 1.6 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 gi|407465802|ref|YP_006776684.1| - 0.022 14.2 0.9 0.078 12.4 0.9 1.8 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|407465802|ref|YP_006776684.1| - 0.031 14.2 0.1 0.047 13.6 0.1 1.3 1 0 0 1 1 1 0 NAD(P)H-binding GD_N PF16030.5 gi|407465803|ref|YP_006776685.1| - 0.087 13.1 0.0 0.23 11.8 0.0 1.7 1 1 0 1 1 1 0 Serine protease gd N-terminus CdiI_2 PF18593.1 gi|407465803|ref|YP_006776685.1| - 0.12 13.0 0.0 0.19 12.4 0.0 1.3 1 0 0 1 1 1 0 CdiI immunity protein Lipocalin_4 PF13648.6 gi|407465803|ref|YP_006776685.1| - 0.3 12.1 2.9 0.94 10.5 2.9 1.9 1 1 0 1 1 1 0 Lipocalin-like domain Snf7 PF03357.21 gi|407465804|ref|YP_006776686.1| - 1.3e-05 24.8 1.1 1.8e-05 24.4 1.1 1.2 1 0 0 1 1 1 1 Snf7 ATG16 PF08614.11 gi|407465804|ref|YP_006776686.1| - 0.0059 16.9 0.9 0.011 16.0 0.9 1.4 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 gi|407465804|ref|YP_006776686.1| - 0.021 14.8 2.2 0.043 13.8 1.5 2.0 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Nup54 PF13874.6 gi|407465804|ref|YP_006776686.1| - 0.062 13.4 0.8 0.12 12.5 0.8 1.5 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 DUF5471 PF17565.2 gi|407465804|ref|YP_006776686.1| - 1.6 9.1 4.3 0.32 11.3 0.7 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5471) Tropomyosin_1 PF12718.7 gi|407465805|ref|YP_006776687.1| - 0.00014 22.1 18.9 0.00035 20.7 13.4 2.0 1 1 1 2 2 2 1 Tropomyosin like DUF1664 PF07889.12 gi|407465805|ref|YP_006776687.1| - 0.00059 19.9 7.7 0.0014 18.7 7.4 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) HMMR_N PF15905.5 gi|407465805|ref|YP_006776687.1| - 0.00099 18.7 12.1 0.00099 18.7 12.1 1.5 1 1 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Spc7 PF08317.11 gi|407465805|ref|YP_006776687.1| - 0.002 17.0 11.1 0.002 17.0 11.1 1.5 1 1 1 2 2 2 1 Spc7 kinetochore protein Laminin_II PF06009.12 gi|407465805|ref|YP_006776687.1| - 0.0027 17.7 7.3 0.0044 17.0 7.3 1.4 1 0 0 1 1 1 1 Laminin Domain II AAA_13 PF13166.6 gi|407465805|ref|YP_006776687.1| - 0.0032 16.2 9.4 0.0035 16.1 9.4 1.0 1 0 0 1 1 1 1 AAA domain CREPT PF16566.5 gi|407465805|ref|YP_006776687.1| - 0.0077 16.4 3.2 0.0077 16.4 3.2 1.6 1 1 0 1 1 1 1 Cell-cycle alteration and expression-elevated protein in tumour IFT57 PF10498.9 gi|407465805|ref|YP_006776687.1| - 0.017 14.1 6.7 0.021 13.8 6.7 1.3 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 DUF3450 PF11932.8 gi|407465805|ref|YP_006776687.1| - 0.024 13.9 6.1 0.022 14.1 4.8 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Prefoldin PF02996.17 gi|407465805|ref|YP_006776687.1| - 0.034 14.1 8.8 0.35 10.8 2.1 2.7 1 1 1 2 2 2 0 Prefoldin subunit DUF812 PF05667.11 gi|407465805|ref|YP_006776687.1| - 0.039 12.8 9.3 0.051 12.5 9.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) ATP-grasp_5 PF13549.6 gi|407465805|ref|YP_006776687.1| - 0.051 13.0 0.1 0.069 12.6 0.1 1.4 1 0 0 1 1 1 0 ATP-grasp domain Baculo_F PF12259.8 gi|407465805|ref|YP_006776687.1| - 0.055 12.0 3.1 0.059 11.9 3.1 1.1 1 0 0 1 1 1 0 Baculovirus F protein Fmp27_WPPW PF10359.9 gi|407465805|ref|YP_006776687.1| - 0.065 12.1 8.5 0.11 11.3 4.6 1.9 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain DUF724 PF05266.14 gi|407465805|ref|YP_006776687.1| - 0.091 12.6 10.9 0.2 11.5 3.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Rx_N PF18052.1 gi|407465805|ref|YP_006776687.1| - 0.095 13.0 4.3 0.17 12.2 4.3 1.5 1 0 0 1 1 1 0 Rx N-terminal domain DUF16 PF01519.16 gi|407465805|ref|YP_006776687.1| - 0.12 12.9 12.0 0.81 10.2 6.7 2.6 1 1 1 2 2 2 0 Protein of unknown function DUF16 Spectrin PF00435.21 gi|407465805|ref|YP_006776687.1| - 0.13 12.8 7.7 0.88 10.1 4.5 2.8 1 1 2 3 3 3 0 Spectrin repeat ADIP PF11559.8 gi|407465805|ref|YP_006776687.1| - 0.14 12.3 8.2 2.1 8.4 2.1 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Prominin PF05478.11 gi|407465805|ref|YP_006776687.1| - 0.16 9.9 5.0 0.18 9.7 5.0 1.0 1 0 0 1 1 1 0 Prominin DUF948 PF06103.11 gi|407465805|ref|YP_006776687.1| - 0.2 11.9 3.3 1.8 8.9 3.3 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) YabA PF06156.13 gi|407465805|ref|YP_006776687.1| - 0.21 12.3 7.3 0.073 13.7 3.0 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF745 PF05335.13 gi|407465805|ref|YP_006776687.1| - 0.25 11.0 1.8 0.23 11.1 0.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF745) DUF4407 PF14362.6 gi|407465805|ref|YP_006776687.1| - 0.27 10.5 1.6 0.29 10.5 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CC2-LZ PF16516.5 gi|407465805|ref|YP_006776687.1| - 0.28 11.6 9.7 1.3 9.4 3.7 3.0 1 1 2 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator TMPIT PF07851.13 gi|407465805|ref|YP_006776687.1| - 0.42 9.8 4.5 0.57 9.4 4.5 1.5 1 1 0 1 1 1 0 TMPIT-like protein Fib_alpha PF08702.10 gi|407465805|ref|YP_006776687.1| - 0.47 10.6 8.8 1.4 9.1 1.6 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Snapin_Pallidin PF14712.6 gi|407465805|ref|YP_006776687.1| - 0.52 10.8 6.3 1.5 9.3 4.7 2.1 1 1 1 2 2 2 0 Snapin/Pallidin NPV_P10 PF05531.12 gi|407465805|ref|YP_006776687.1| - 0.53 10.8 6.6 20 5.7 6.3 2.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Nas2_N PF18265.1 gi|407465805|ref|YP_006776687.1| - 0.64 10.0 8.4 1.8 8.5 0.2 3.4 2 1 1 3 3 3 0 Nas2 N_terminal domain Syntaxin_2 PF14523.6 gi|407465805|ref|YP_006776687.1| - 0.88 10.0 7.8 22 5.5 7.7 2.5 1 1 0 1 1 1 0 Syntaxin-like protein FAM76 PF16046.5 gi|407465805|ref|YP_006776687.1| - 0.9 8.8 8.0 1.1 8.6 8.0 1.1 1 0 0 1 1 1 0 FAM76 protein SlyX PF04102.12 gi|407465805|ref|YP_006776687.1| - 0.94 10.1 3.3 7.6 7.2 2.9 2.3 1 1 1 2 2 2 0 SlyX GP41 PF00517.17 gi|407465805|ref|YP_006776687.1| - 0.98 9.3 3.3 9.8 6.0 0.3 2.2 1 1 2 3 3 3 0 Retroviral envelope protein DHR10 PF18595.1 gi|407465805|ref|YP_006776687.1| - 1.1 9.4 13.9 3.4 7.7 12.7 2.3 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain Atg14 PF10186.9 gi|407465805|ref|YP_006776687.1| - 1.3 8.0 9.2 3.4 6.7 9.2 1.7 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 COG2 PF06148.11 gi|407465805|ref|YP_006776687.1| - 1.5 9.0 7.2 0.57 10.3 3.3 2.2 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 TMEM192 PF14802.6 gi|407465805|ref|YP_006776687.1| - 1.7 7.7 3.0 0.62 9.1 0.3 1.5 2 0 0 2 2 2 0 TMEM192 family UPF0242 PF06785.11 gi|407465805|ref|YP_006776687.1| - 2.4 8.2 11.1 3.8 7.6 10.6 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMF_DNA_bd PF12329.8 gi|407465805|ref|YP_006776687.1| - 6.4 6.8 19.9 0.077 13.0 10.1 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding HTH_45 PF14947.6 gi|407465806|ref|YP_006776688.1| - 2.1e-08 34.0 0.0 2.5e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|407465806|ref|YP_006776688.1| - 6.3e-06 26.0 0.0 9.1e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|407465806|ref|YP_006776688.1| - 9.4e-05 22.8 0.0 0.00013 22.4 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|407465806|ref|YP_006776688.1| - 0.0036 17.1 0.0 0.0045 16.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Mrr_N PF14338.6 gi|407465806|ref|YP_006776688.1| - 0.0052 16.9 0.0 0.028 14.5 0.0 1.9 1 1 1 2 2 2 1 Mrr N-terminal domain HTH_20 PF12840.7 gi|407465806|ref|YP_006776688.1| - 0.0055 16.7 0.0 0.0082 16.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|407465806|ref|YP_006776688.1| - 0.021 14.7 0.0 0.038 13.9 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF1495 PF07381.11 gi|407465806|ref|YP_006776688.1| - 0.022 14.6 0.0 0.038 13.8 0.0 1.5 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) DUF2250 PF10007.9 gi|407465806|ref|YP_006776688.1| - 0.065 13.3 0.0 0.085 13.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DDRGK PF09756.9 gi|407465806|ref|YP_006776688.1| - 0.079 12.5 0.1 0.093 12.3 0.1 1.0 1 0 0 1 1 1 0 DDRGK domain MarR PF01047.22 gi|407465806|ref|YP_006776688.1| - 0.1 12.5 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 MarR family RNA_pol_Rpc34 PF05158.12 gi|407465806|ref|YP_006776688.1| - 0.11 11.9 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit Rrf2 PF02082.20 gi|407465806|ref|YP_006776688.1| - 0.15 12.5 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_24 PF13412.6 gi|407465807|ref|YP_006776689.1| - 0.0038 16.8 0.0 0.0085 15.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|407465807|ref|YP_006776689.1| - 0.014 15.0 0.0 0.031 13.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_micro PF17007.5 gi|407465807|ref|YP_006776689.1| - 0.017 14.0 0.2 0.024 13.5 0.2 1.2 1 0 0 1 1 1 0 HTH-like DUF3042 PF11240.8 gi|407465807|ref|YP_006776689.1| - 0.041 13.9 0.8 0.091 12.8 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3042) TrmB PF01978.19 gi|407465807|ref|YP_006776689.1| - 0.046 13.6 0.0 0.092 12.7 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MKT1_C PF12246.8 gi|407465808|ref|YP_006776690.1| - 0.016 14.5 1.7 0.11 11.7 0.1 2.4 1 1 0 2 2 2 0 Temperature dependent protein affecting M2 dsRNA replication ORF6C PF10552.9 gi|407465808|ref|YP_006776690.1| - 0.033 14.3 4.5 0.042 13.9 2.1 2.2 1 1 1 2 2 2 0 ORF6C domain DUF948 PF06103.11 gi|407465808|ref|YP_006776690.1| - 0.034 14.4 6.5 3.6 7.9 0.1 3.6 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) MutS_III PF05192.18 gi|407465808|ref|YP_006776690.1| - 0.14 12.4 7.4 0.2 11.9 7.4 1.3 1 0 0 1 1 1 0 MutS domain III SPACA9 PF15120.6 gi|407465808|ref|YP_006776690.1| - 0.16 11.7 7.9 0.038 13.8 3.2 2.0 1 1 1 2 2 2 0 Sperm acrosome-associated protein 9 YfdX PF10938.8 gi|407465808|ref|YP_006776690.1| - 0.17 11.8 3.6 1.1 9.1 2.9 2.5 1 1 0 1 1 1 0 YfdX protein PTPA PF03095.15 gi|407465808|ref|YP_006776690.1| - 0.2 11.1 4.2 0.38 10.1 0.3 2.2 1 1 1 2 2 2 0 Phosphotyrosyl phosphate activator (PTPA) protein DUF4404 PF14357.6 gi|407465808|ref|YP_006776690.1| - 0.85 10.3 13.4 14 6.4 0.1 3.9 2 1 2 4 4 4 0 Domain of unknown function (DUF4404) DUF3347 PF11827.8 gi|407465808|ref|YP_006776690.1| - 2.2 8.5 10.3 1.6 8.9 0.4 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) DUF2228 PF10228.9 gi|407465808|ref|YP_006776690.1| - 2.5 7.8 6.8 0.83 9.3 1.3 2.1 1 1 0 2 2 2 0 Uncharacterised conserved protein (DUF2228) Cytochrom_B562 PF07361.11 gi|407465808|ref|YP_006776690.1| - 5.9 7.6 8.1 89 3.8 3.7 3.6 1 1 1 2 2 2 0 Cytochrome b562 IZUMO PF15005.6 gi|407465808|ref|YP_006776690.1| - 6.5 7.3 6.3 39 4.8 0.2 2.4 1 1 0 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated DUF981 PF06168.11 gi|407465809|ref|YP_006776691.1| - 0.047 13.6 2.1 0.056 13.4 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF981) SKG6 PF08693.10 gi|407465809|ref|YP_006776691.1| - 0.077 12.4 0.6 0.077 12.4 0.6 2.1 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Saf_2TM PF18303.1 gi|407465809|ref|YP_006776691.1| - 4.3 6.9 7.6 4.9 6.7 0.8 2.0 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain Phage_holin_2_4 PF16082.5 gi|407465809|ref|YP_006776691.1| - 6 6.7 6.7 3 7.7 0.9 2.0 1 1 1 2 2 2 0 Bacteriophage holin family, superfamily II-like Fer4_12 PF13353.6 gi|407465810|ref|YP_006776692.1| - 2.7e-13 50.4 0.3 1e-12 48.5 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|407465810|ref|YP_006776692.1| - 1.4e-12 47.8 0.3 3e-12 46.7 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|407465810|ref|YP_006776692.1| - 2.3e-09 37.8 0.1 4e-09 37.1 0.1 1.5 1 1 0 1 1 1 1 Radical SAM superfamily GTP_cyclohydroI PF01227.22 gi|407465811|ref|YP_006776693.1| - 1.3e-64 216.9 0.0 1.5e-64 216.7 0.0 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase I OST-HTH PF12872.7 gi|407465811|ref|YP_006776693.1| - 0.02 14.7 0.1 0.35 10.7 0.1 2.5 1 1 0 1 1 1 0 OST-HTH/LOTUS domain QueF PF14489.6 gi|407465811|ref|YP_006776693.1| - 0.024 14.8 0.0 0.041 14.0 0.0 1.4 1 0 0 1 1 1 0 QueF-like protein LAMTOR5 PF16672.5 gi|407465811|ref|YP_006776693.1| - 0.15 12.0 0.1 0.33 10.9 0.0 1.6 2 0 0 2 2 2 0 Ragulator complex protein LAMTOR5 QueC PF06508.13 gi|407465813|ref|YP_006776695.1| - 2.1e-48 164.6 0.1 2.4e-48 164.4 0.1 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Arginosuc_synth PF00764.19 gi|407465813|ref|YP_006776695.1| - 5.4e-05 22.6 0.0 6.7e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.21 gi|407465813|ref|YP_006776695.1| - 0.00011 22.0 0.0 0.00015 21.6 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.17 gi|407465813|ref|YP_006776695.1| - 0.019 14.1 0.0 0.032 13.3 0.0 1.4 1 0 0 1 1 1 0 NAD synthase GHMP_kinases_N PF00288.26 gi|407465814|ref|YP_006776696.1| - 6.8e-13 48.7 3.2 1.4e-12 47.7 3.2 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|407465814|ref|YP_006776696.1| - 6.3e-10 39.3 0.0 1.2e-09 38.4 0.0 1.4 1 0 0 1 1 1 1 GHMP kinases C terminal ATP_bind_1 PF03029.17 gi|407465815|ref|YP_006776697.1| - 9.5e-57 192.5 0.0 1.1e-56 192.4 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein CbiA PF01656.23 gi|407465815|ref|YP_006776697.1| - 9e-05 22.5 0.1 0.00014 21.9 0.1 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain CLP1_P PF16575.5 gi|407465815|ref|YP_006776697.1| - 0.00065 19.6 0.1 0.023 14.5 0.0 2.4 1 1 1 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_16 PF13191.6 gi|407465815|ref|YP_006776697.1| - 0.0035 17.7 0.0 0.0081 16.6 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain MeaB PF03308.16 gi|407465815|ref|YP_006776697.1| - 0.012 14.7 0.0 0.018 14.0 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATPase PF06745.13 gi|407465815|ref|YP_006776697.1| - 0.013 14.8 0.0 0.018 14.4 0.0 1.2 1 0 0 1 1 1 0 KaiC DUF2075 PF09848.9 gi|407465815|ref|YP_006776697.1| - 0.015 14.6 0.0 0.029 13.6 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_18 PF13238.6 gi|407465815|ref|YP_006776697.1| - 0.02 15.5 0.1 0.032 14.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|407465815|ref|YP_006776697.1| - 0.027 14.4 0.0 0.49 10.3 0.0 2.1 2 0 0 2 2 2 0 NACHT domain SRP54 PF00448.22 gi|407465815|ref|YP_006776697.1| - 0.043 13.4 0.0 1.4 8.5 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain ParA PF10609.9 gi|407465815|ref|YP_006776697.1| - 0.048 13.1 0.7 0.85 9.0 0.7 2.1 1 1 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase NB-ARC PF00931.22 gi|407465815|ref|YP_006776697.1| - 0.076 12.2 0.0 0.1 11.8 0.0 1.3 1 1 0 1 1 1 0 NB-ARC domain APS_kinase PF01583.20 gi|407465815|ref|YP_006776697.1| - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_24 PF13479.6 gi|407465815|ref|YP_006776697.1| - 0.11 12.2 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|407465815|ref|YP_006776697.1| - 0.12 11.6 0.0 0.2 10.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin LPG_synthase_TM PF03706.13 gi|407465816|ref|YP_006776698.1| - 8.6e-22 78.0 15.2 1.2e-21 77.5 15.2 1.2 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region CPP1-like PF11833.8 gi|407465816|ref|YP_006776698.1| - 0.81 9.3 5.8 0.82 9.3 4.3 1.7 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF5392 PF17370.2 gi|407465816|ref|YP_006776698.1| - 5.5 7.1 8.6 0.29 11.2 1.2 2.5 3 0 0 3 3 3 0 Family of unknown function (DUF5392) adh_short PF00106.25 gi|407465817|ref|YP_006776699.1| - 2.4e-58 196.8 0.5 3.2e-58 196.4 0.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|407465817|ref|YP_006776699.1| - 3.7e-40 137.9 0.1 4.6e-40 137.6 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|407465817|ref|YP_006776699.1| - 1.2e-16 61.1 0.2 1.9e-16 60.5 0.2 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 gi|407465817|ref|YP_006776699.1| - 0.00021 21.3 0.0 0.0015 18.4 0.0 2.0 1 1 0 1 1 1 1 NAD(P)H-binding DUF1776 PF08643.10 gi|407465817|ref|YP_006776699.1| - 0.001 18.5 0.0 0.0022 17.4 0.0 1.5 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) Polysacc_synt_2 PF02719.15 gi|407465817|ref|YP_006776699.1| - 0.0011 18.1 0.2 0.0015 17.7 0.2 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein DFP PF04127.15 gi|407465817|ref|YP_006776699.1| - 0.0026 17.6 0.2 0.0071 16.2 0.2 1.7 1 1 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein Sacchrp_dh_NADP PF03435.18 gi|407465817|ref|YP_006776699.1| - 0.0036 17.5 0.1 0.0078 16.5 0.1 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Epimerase PF01370.21 gi|407465817|ref|YP_006776699.1| - 0.0079 15.7 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 2-Hacid_dh_C PF02826.19 gi|407465817|ref|YP_006776699.1| - 0.055 12.8 0.1 0.11 11.9 0.1 1.6 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATPgrasp_N PF18130.1 gi|407465817|ref|YP_006776699.1| - 0.058 13.9 0.1 1.2 9.8 0.0 2.5 2 0 0 2 2 2 0 ATP-grasp N-terminal domain 3HCDH_N PF02737.18 gi|407465817|ref|YP_006776699.1| - 0.059 13.3 0.3 0.15 11.9 0.1 1.7 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|407465817|ref|YP_006776699.1| - 0.072 13.7 0.2 0.23 12.0 0.1 1.9 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|407465817|ref|YP_006776699.1| - 0.078 12.3 0.2 0.14 11.4 0.2 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Eno-Rase_NADH_b PF12242.8 gi|407465817|ref|YP_006776699.1| - 0.079 12.7 0.0 0.22 11.3 0.0 1.8 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ADH_zinc_N PF00107.26 gi|407465817|ref|YP_006776699.1| - 0.11 12.4 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase Pyr_redox_2 PF07992.14 gi|407465817|ref|YP_006776699.1| - 0.15 11.3 0.0 0.25 10.5 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Ribosomal_L32p PF01783.23 gi|407465818|ref|YP_006776700.1| - 0.014 15.6 0.1 0.014 15.6 0.1 2.5 3 0 0 3 3 3 0 Ribosomal L32p protein family OrfB_Zn_ribbon PF07282.11 gi|407465818|ref|YP_006776700.1| - 0.025 14.5 0.4 1.1 9.2 0.1 2.3 2 0 0 2 2 2 0 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.12 gi|407465818|ref|YP_006776700.1| - 0.031 13.8 0.6 2.8 7.5 0.0 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding zf-RING_10 PF16685.5 gi|407465818|ref|YP_006776700.1| - 0.075 13.2 0.2 2.7 8.2 0.0 2.2 2 0 0 2 2 2 0 zinc RING finger of MSL2 Zn_Tnp_IS1595 PF12760.7 gi|407465818|ref|YP_006776700.1| - 0.21 11.6 3.7 2 8.5 3.7 2.2 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Polbeta PF18765.1 gi|407465819|ref|YP_006776701.1| - 0.01 15.9 0.6 0.17 12.0 0.0 2.7 2 0 0 2 2 2 0 Polymerase beta, Nucleotidyltransferase PAPS_reduct PF01507.19 gi|407465820|ref|YP_006776702.1| - 4.3e-45 153.8 0.0 5.4e-45 153.5 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family CSN5_C PF18323.1 gi|407465820|ref|YP_006776702.1| - 0.059 14.3 0.0 0.093 13.7 0.0 1.4 1 0 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain ATP-sulfurylase PF01747.17 gi|407465821|ref|YP_006776703.1| - 1.3e-81 273.1 0.0 1.8e-81 272.7 0.0 1.2 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.6 gi|407465821|ref|YP_006776703.1| - 1.7e-45 154.6 0.0 6.7e-45 152.6 0.0 2.0 2 0 0 2 2 2 1 PUA-like domain HhH-GPD PF00730.25 gi|407465823|ref|YP_006776705.1| - 2.5e-25 89.0 1.0 2.9e-25 88.8 0.1 1.5 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|407465823|ref|YP_006776705.1| - 4.1e-09 35.9 0.0 1e-08 34.6 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif AGOG PF09171.10 gi|407465823|ref|YP_006776705.1| - 0.00032 20.1 0.8 0.0046 16.3 0.0 2.1 2 0 0 2 2 2 1 N-glycosylase/DNA lyase HHH_5 PF14520.6 gi|407465823|ref|YP_006776705.1| - 0.00094 19.7 0.4 0.41 11.3 0.1 2.5 1 1 1 2 2 2 2 Helix-hairpin-helix domain DUF2400 PF09674.10 gi|407465823|ref|YP_006776705.1| - 0.0028 17.7 0.1 0.014 15.4 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2400) HHH_2 PF12826.7 gi|407465823|ref|YP_006776705.1| - 0.029 14.5 0.0 2.9 8.1 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix motif T3RM_EcoP15I_C PF18273.1 gi|407465823|ref|YP_006776705.1| - 0.088 13.1 1.6 2.3 8.6 0.1 2.5 2 1 0 2 2 2 0 Type III R-M EcoP15I C-terminal domain TSP_3 PF02412.18 gi|407465824|ref|YP_006776706.1| - 0.0034 17.0 3.1 0.0034 17.0 3.1 3.8 2 2 2 4 4 4 3 Thrombospondin type 3 repeat DUF521 PF04412.13 gi|407465825|ref|YP_006776707.1| - 1.1e-108 363.6 0.0 1.4e-108 363.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF521) COMM_domain PF07258.14 gi|407465825|ref|YP_006776707.1| - 0.52 10.5 2.6 5 7.3 2.6 2.3 1 1 0 1 1 1 0 COMM domain DUF126 PF01989.16 gi|407465826|ref|YP_006776708.1| - 1.1e-28 98.9 0.1 1.6e-28 98.3 0.1 1.3 1 0 0 1 1 1 1 Aconitase X swivel domain FbpA PF05833.11 gi|407465827|ref|YP_006776709.1| - 8.7e-39 133.5 11.2 1.1e-38 133.2 11.2 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|407465827|ref|YP_006776709.1| - 1.9e-22 80.0 0.0 7e-22 78.1 0.0 2.1 1 0 0 1 1 1 1 NFACT protein RNA binding domain 7TM_GPCR_Srsx PF10320.9 gi|407465828|ref|YP_006776710.1| - 0.0015 18.0 0.8 0.0022 17.4 0.8 1.2 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srsx MFS_1_like PF12832.7 gi|407465828|ref|YP_006776710.1| - 0.013 14.4 1.1 0.015 14.2 1.1 1.2 1 0 0 1 1 1 0 MFS_1 like family DUF4366 PF14283.6 gi|407465828|ref|YP_006776710.1| - 0.017 15.2 0.1 0.024 14.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) Fig1 PF12351.8 gi|407465828|ref|YP_006776710.1| - 0.041 13.8 1.2 0.27 11.1 1.9 1.9 2 1 0 2 2 2 0 Ca2+ regulator and membrane fusion protein Fig1 DUF21 PF01595.20 gi|407465828|ref|YP_006776710.1| - 0.12 12.1 0.8 0.2 11.3 0.8 1.4 1 1 0 1 1 1 0 Cyclin M transmembrane N-terminal domain DUF202 PF02656.15 gi|407465828|ref|YP_006776710.1| - 0.23 11.9 3.6 0.11 13.0 1.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF202) Methyltransf_31 PF13847.6 gi|407465829|ref|YP_006776711.1| - 6.4e-14 52.0 0.6 2.1e-13 50.3 0.6 1.7 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|407465829|ref|YP_006776711.1| - 1.4e-11 44.6 0.5 1.8e-11 44.2 0.5 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 gi|407465829|ref|YP_006776711.1| - 4.6e-10 39.4 1.8 6.1e-10 39.0 1.8 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|407465829|ref|YP_006776711.1| - 9.3e-10 38.6 0.9 1.2e-09 38.3 0.9 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|407465829|ref|YP_006776711.1| - 7.5e-09 36.2 0.0 2e-08 34.8 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|407465829|ref|YP_006776711.1| - 1.1e-08 34.7 0.2 1.6e-07 30.9 0.0 2.1 2 0 0 2 2 2 1 Putative methyltransferase GCD14 PF08704.10 gi|407465829|ref|YP_006776711.1| - 1.8e-08 34.4 0.0 2.3e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit MTS PF05175.14 gi|407465829|ref|YP_006776711.1| - 2e-08 33.9 0.1 6.4e-08 32.3 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|407465829|ref|YP_006776711.1| - 8.6e-08 31.8 0.2 1.4e-07 31.1 0.2 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|407465829|ref|YP_006776711.1| - 1.6e-06 28.8 0.1 4e-06 27.5 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|407465829|ref|YP_006776711.1| - 4.8e-06 25.9 0.2 5.6e-06 25.7 0.2 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_11 PF08241.12 gi|407465829|ref|YP_006776711.1| - 6.3e-06 26.8 0.0 1.8e-05 25.3 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|407465829|ref|YP_006776711.1| - 1.7e-05 24.2 0.0 2.6e-05 23.7 0.0 1.5 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase GidB PF02527.15 gi|407465829|ref|YP_006776711.1| - 3.5e-05 23.2 0.2 6.2e-05 22.4 0.1 1.3 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G Cons_hypoth95 PF03602.15 gi|407465829|ref|YP_006776711.1| - 3.9e-05 23.4 0.0 4.8e-05 23.1 0.0 1.3 1 1 0 1 1 1 1 Conserved hypothetical protein 95 FtsJ PF01728.19 gi|407465829|ref|YP_006776711.1| - 8.7e-05 22.7 0.0 0.024 14.7 0.0 2.0 2 0 0 2 2 2 1 FtsJ-like methyltransferase TrmK PF04816.12 gi|407465829|ref|YP_006776711.1| - 0.00014 21.4 0.7 0.00018 21.1 0.7 1.2 1 0 0 1 1 1 1 tRNA (adenine(22)-N(1))-methyltransferase Methyltransf_15 PF09445.10 gi|407465829|ref|YP_006776711.1| - 0.00028 20.5 0.2 0.00042 19.9 0.2 1.5 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase UPF0020 PF01170.18 gi|407465829|ref|YP_006776711.1| - 0.00098 18.9 0.1 0.0043 16.7 0.1 2.1 2 1 0 2 2 2 1 Putative RNA methylase family UPF0020 Met_10 PF02475.16 gi|407465829|ref|YP_006776711.1| - 0.0012 18.6 0.0 0.0014 18.4 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_24 PF13578.6 gi|407465829|ref|YP_006776711.1| - 0.0024 18.9 0.0 0.0037 18.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|407465829|ref|YP_006776711.1| - 0.0028 17.3 0.1 0.028 14.1 0.0 2.0 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltransf_5 PF01795.19 gi|407465829|ref|YP_006776711.1| - 0.0054 16.3 0.0 0.012 15.2 0.0 1.5 1 1 0 1 1 1 1 MraW methylase family DOT1 PF08123.13 gi|407465829|ref|YP_006776711.1| - 0.0091 15.5 0.2 0.033 13.7 0.2 1.9 1 1 0 1 1 1 1 Histone methylation protein DOT1 AviRa PF11599.8 gi|407465829|ref|YP_006776711.1| - 0.0095 15.4 0.0 0.014 14.9 0.0 1.3 1 0 0 1 1 1 1 RRNA methyltransferase AviRa Methyltransf_23 PF13489.6 gi|407465829|ref|YP_006776711.1| - 0.014 15.2 0.0 0.021 14.7 0.0 1.3 1 1 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 gi|407465829|ref|YP_006776711.1| - 0.014 14.8 0.1 0.025 14.0 0.0 1.4 2 0 0 2 2 2 0 Tellurite resistance protein TehB RrnaAD PF00398.20 gi|407465829|ref|YP_006776711.1| - 0.026 13.6 0.1 0.041 12.9 0.1 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_32 PF13679.6 gi|407465829|ref|YP_006776711.1| - 0.029 14.4 0.0 0.041 13.9 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|407465829|ref|YP_006776711.1| - 0.029 14.1 0.0 0.58 9.8 0.0 2.0 2 0 0 2 2 2 0 DNA methylase N6_Mtase PF02384.16 gi|407465829|ref|YP_006776711.1| - 0.037 13.3 0.0 0.056 12.7 0.0 1.2 1 0 0 1 1 1 0 N-6 DNA Methylase TRM PF02005.16 gi|407465829|ref|YP_006776711.1| - 0.065 12.4 0.0 0.082 12.1 0.0 1.2 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase ANAPC4_WD40 PF12894.7 gi|407465829|ref|YP_006776711.1| - 0.093 13.0 0.0 0.25 11.7 0.0 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain tRNA_U5-meth_tr PF05958.11 gi|407465829|ref|YP_006776711.1| - 0.098 11.6 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase TP_methylase PF00590.20 gi|407465830|ref|YP_006776712.1| - 4.8e-54 183.5 0.0 5.4e-54 183.4 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TP_methylase PF00590.20 gi|407465831|ref|YP_006776713.1| - 1e-48 166.1 0.1 1.2e-48 165.9 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|407465831|ref|YP_006776713.1| - 0.0014 19.1 0.1 0.0034 17.8 0.1 1.7 1 1 0 1 1 1 1 Radical SAM superfamily TubC_N PF18563.1 gi|407465831|ref|YP_006776713.1| - 0.02 14.9 0.5 9.8 6.2 0.1 3.4 3 0 0 3 3 3 0 TubC N-terminal docking domain Cyt_b-c1_8 PF10890.8 gi|407465831|ref|YP_006776713.1| - 0.041 14.3 0.0 0.1 13.0 0.0 1.7 1 0 0 1 1 1 0 Cytochrome b-c1 complex subunit 8 Asp_Glu_race PF01177.22 gi|407465832|ref|YP_006776714.1| - 1.9e-16 60.6 0.0 2.3e-16 60.3 0.0 1.1 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Snf7 PF03357.21 gi|407465833|ref|YP_006776715.1| - 0.0024 17.5 9.4 0.0069 16.0 9.4 1.8 1 1 0 1 1 1 1 Snf7 KASH_CCD PF14662.6 gi|407465833|ref|YP_006776715.1| - 0.0027 17.6 3.1 0.0027 17.6 3.1 1.7 2 0 0 2 2 2 1 Coiled-coil region of CCDC155 or KASH BLOC1S3 PF15753.5 gi|407465833|ref|YP_006776715.1| - 0.015 15.4 0.5 0.015 15.4 0.5 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 Baculo_PEP_C PF04513.12 gi|407465833|ref|YP_006776715.1| - 0.019 15.0 2.5 0.59 10.2 0.3 2.4 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Serine_rich PF08824.10 gi|407465833|ref|YP_006776715.1| - 0.025 14.6 3.1 0.029 14.4 2.1 1.5 1 1 0 1 1 1 0 Serine rich protein interaction domain Prominin PF05478.11 gi|407465833|ref|YP_006776715.1| - 0.054 11.5 2.9 1.1 7.1 0.1 2.0 1 1 1 2 2 2 0 Prominin DASH_Duo1 PF08651.10 gi|407465833|ref|YP_006776715.1| - 0.061 13.1 0.9 0.42 10.4 0.1 2.5 2 0 0 2 2 2 0 DASH complex subunit Duo1 Cas_Cas7 PF05107.12 gi|407465833|ref|YP_006776715.1| - 0.064 12.8 0.1 0.086 12.4 0.1 1.2 1 0 0 1 1 1 0 CRISPR-associated protein Cas7 Rx_N PF18052.1 gi|407465833|ref|YP_006776715.1| - 0.081 13.2 1.0 0.94 9.8 0.1 2.5 1 1 1 2 2 2 0 Rx N-terminal domain Flagellin_C PF00700.21 gi|407465833|ref|YP_006776715.1| - 0.11 12.9 3.6 2.2 8.7 0.9 2.9 2 2 0 2 2 2 0 Bacterial flagellin C-terminal helical region ATG16 PF08614.11 gi|407465833|ref|YP_006776715.1| - 0.34 11.1 5.2 0.056 13.7 1.3 1.6 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF948 PF06103.11 gi|407465833|ref|YP_006776715.1| - 0.46 10.8 5.0 5.7 7.3 0.2 3.3 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) NPV_P10 PF05531.12 gi|407465833|ref|YP_006776715.1| - 1.1 9.8 4.9 11 6.5 0.8 2.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF745 PF05335.13 gi|407465833|ref|YP_006776715.1| - 2.7 7.7 8.4 4.5 6.9 4.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF745) Glycos_transf_2 PF00535.26 gi|407465834|ref|YP_006776716.1| - 3.5e-34 118.1 0.0 5.7e-34 117.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 GtrA PF04138.14 gi|407465834|ref|YP_006776716.1| - 7.5e-25 87.5 9.9 1.3e-24 86.6 9.9 1.4 1 0 0 1 1 1 1 GtrA-like protein Glyco_tranf_2_3 PF13641.6 gi|407465834|ref|YP_006776716.1| - 1.4e-07 31.7 0.0 2e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 CHGN PF05679.16 gi|407465834|ref|YP_006776716.1| - 0.064 12.1 0.1 0.082 11.7 0.1 1.1 1 0 0 1 1 1 0 Chondroitin N-acetylgalactosaminyltransferase Osmo_MPGsynth PF09488.10 gi|407465834|ref|YP_006776716.1| - 0.11 11.1 0.2 0.18 10.5 0.2 1.3 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) GDP_Man_Dehyd PF16363.5 gi|407465835|ref|YP_006776717.1| - 8.8e-20 71.3 0.0 1.3e-14 54.3 0.0 2.6 2 1 0 2 2 2 2 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|407465835|ref|YP_006776717.1| - 2.3e-18 66.5 0.0 1.3e-17 64.1 0.0 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|407465835|ref|YP_006776717.1| - 0.0017 17.5 0.0 0.018 14.1 0.0 2.3 2 0 0 2 2 2 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|407465835|ref|YP_006776717.1| - 0.0065 15.6 0.0 0.021 13.9 0.0 1.7 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Glycos_transf_2 PF00535.26 gi|407465836|ref|YP_006776718.1| - 1.4e-20 73.8 0.3 2.2e-20 73.2 0.3 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 DUF2304 PF10066.9 gi|407465836|ref|YP_006776718.1| - 3.4e-10 40.1 6.4 7.9e-10 38.9 6.4 1.6 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) Glyco_tranf_2_3 PF13641.6 gi|407465836|ref|YP_006776718.1| - 3.8e-07 30.2 0.0 5.3e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|407465836|ref|YP_006776718.1| - 0.091 13.3 0.0 0.18 12.3 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 NTP_transferase PF00483.23 gi|407465837|ref|YP_006776719.1| - 1.5e-18 67.3 0.0 2.4e-18 66.6 0.0 1.3 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|407465837|ref|YP_006776719.1| - 7.2e-08 32.9 0.0 1.1e-07 32.4 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|407465837|ref|YP_006776719.1| - 0.017 14.9 0.0 0.025 14.3 0.0 1.4 1 1 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Epimerase PF01370.21 gi|407465838|ref|YP_006776720.1| - 3.4e-35 121.7 0.0 4.2e-35 121.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|407465838|ref|YP_006776720.1| - 4e-22 79.1 0.0 5.3e-22 78.6 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|407465838|ref|YP_006776720.1| - 6.9e-13 48.2 0.0 9.1e-13 47.8 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|407465838|ref|YP_006776720.1| - 1.4e-11 44.1 0.0 1.8e-11 43.7 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|407465838|ref|YP_006776720.1| - 0.00033 19.9 0.5 0.88 8.7 0.0 2.7 2 1 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 gi|407465838|ref|YP_006776720.1| - 0.03 13.5 0.0 0.077 12.1 0.0 1.7 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein Radical_SAM PF04055.21 gi|407465839|ref|YP_006776721.1| - 4.1e-14 53.3 0.1 1.6e-13 51.4 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|407465839|ref|YP_006776721.1| - 0.00011 22.2 0.0 0.00024 21.1 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain SepSecS PF05889.13 gi|407465839|ref|YP_006776721.1| - 0.055 12.2 0.1 0.1 11.3 0.1 1.3 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS LPG_synthase_TM PF03706.13 gi|407465843|ref|YP_006776725.1| - 5.4e-21 75.4 6.6 6.1e-21 75.2 6.6 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Glycos_transf_2 PF00535.26 gi|407465844|ref|YP_006776726.1| - 1.8e-22 79.9 0.0 3.3e-22 79.1 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|407465844|ref|YP_006776726.1| - 1.4e-05 25.1 0.0 2.1e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|407465844|ref|YP_006776726.1| - 0.00017 21.2 0.9 0.00035 20.2 0.7 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 CopG_antitoxin PF12441.8 gi|407465844|ref|YP_006776726.1| - 0.055 14.0 0.1 0.15 12.6 0.1 1.7 1 0 0 1 1 1 0 CopG antitoxin of type II toxin-antitoxin system Glyco_tranf_2_4 PF13704.6 gi|407465844|ref|YP_006776726.1| - 0.12 12.9 0.0 0.25 11.9 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 2 Radical_SAM PF04055.21 gi|407465845|ref|YP_006776727.1| - 6e-16 59.3 0.2 1.3e-15 58.1 0.1 1.6 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|407465845|ref|YP_006776727.1| - 3.3e-08 33.7 1.5 1.7e-07 31.4 0.1 2.8 2 1 1 3 3 3 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|407465845|ref|YP_006776727.1| - 8.7e-07 29.4 1.0 3e-06 27.6 1.0 2.0 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|407465845|ref|YP_006776727.1| - 4e-06 27.2 0.1 4e-06 27.2 0.1 2.4 3 1 0 3 3 3 1 4Fe-4S single cluster domain RRM_2 PF04059.12 gi|407465845|ref|YP_006776727.1| - 0.041 14.1 0.8 0.15 12.3 0.0 2.3 3 0 0 3 3 3 0 RNA recognition motif 2 CODH_A_N PF18537.1 gi|407465845|ref|YP_006776727.1| - 0.17 11.9 0.0 2.7 8.0 0.0 2.7 2 1 1 3 3 3 0 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Epimerase PF01370.21 gi|407465846|ref|YP_006776728.1| - 3.5e-11 43.0 0.1 5e-09 36.0 0.1 2.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|407465846|ref|YP_006776728.1| - 0.00022 20.4 0.0 0.0049 16.0 0.0 2.0 2 0 0 2 2 2 1 RmlD substrate binding domain GDP_Man_Dehyd PF16363.5 gi|407465846|ref|YP_006776728.1| - 0.019 14.4 0.7 6.4 6.1 0.0 2.8 2 1 1 3 3 3 0 GDP-mannose 4,6 dehydratase Phage_integr_3 PF16795.5 gi|407465846|ref|YP_006776728.1| - 0.034 14.1 2.3 0.69 9.8 0.1 2.5 2 1 1 3 3 3 0 Archaeal phage integrase Semialdhyde_dh PF01118.24 gi|407465846|ref|YP_006776728.1| - 0.038 14.4 0.2 2.8 8.4 0.0 2.8 2 1 1 3 3 3 0 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_10 PF13460.6 gi|407465846|ref|YP_006776728.1| - 0.052 13.4 0.0 0.25 11.2 0.0 1.9 1 1 1 2 2 2 0 NAD(P)H-binding Epimerase PF01370.21 gi|407465847|ref|YP_006776729.1| - 9.5e-24 84.2 0.0 1.7e-21 76.8 0.0 2.1 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|407465847|ref|YP_006776729.1| - 1.5e-10 41.1 0.0 2.2e-08 33.9 0.0 2.1 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|407465847|ref|YP_006776729.1| - 5.6e-06 25.6 0.1 0.00074 18.6 0.0 2.2 1 1 0 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|407465847|ref|YP_006776729.1| - 7.5e-06 25.3 0.1 1.3e-05 24.5 0.0 1.5 2 0 0 2 2 2 1 Male sterility protein RmlD_sub_bind PF04321.17 gi|407465847|ref|YP_006776729.1| - 0.0018 17.4 0.0 0.022 13.9 0.0 2.2 3 0 0 3 3 3 1 RmlD substrate binding domain GRAM PF02893.20 gi|407465847|ref|YP_006776729.1| - 0.049 13.5 1.9 5.8 6.8 0.1 2.3 2 0 0 2 2 2 0 GRAM domain TehB PF03848.14 gi|407465847|ref|YP_006776729.1| - 0.053 12.9 1.6 0.18 11.2 1.4 1.8 2 0 0 2 2 2 0 Tellurite resistance protein TehB CmcI PF04989.12 gi|407465848|ref|YP_006776730.1| - 4.7e-83 277.9 0.0 5.8e-83 277.6 0.0 1.1 1 0 0 1 1 1 1 Cephalosporin hydroxylase Methyltransf_24 PF13578.6 gi|407465848|ref|YP_006776730.1| - 1.1e-08 36.0 0.0 1.7e-08 35.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|407465848|ref|YP_006776730.1| - 5.5e-06 25.7 0.3 7e-06 25.4 0.3 1.1 1 0 0 1 1 1 1 O-methyltransferase TylF PF05711.11 gi|407465848|ref|YP_006776730.1| - 0.0012 18.2 0.0 0.046 13.0 0.0 2.1 2 0 0 2 2 2 1 Macrocin-O-methyltransferase (TylF) Glyco_transf_21 PF13506.6 gi|407465848|ref|YP_006776730.1| - 0.013 15.0 0.0 0.023 14.2 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 21 DUF3854 PF12965.7 gi|407465848|ref|YP_006776730.1| - 0.021 14.8 0.3 0.059 13.3 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3854) Toprim_2 PF13155.6 gi|407465848|ref|YP_006776730.1| - 0.15 12.5 0.0 0.27 11.7 0.0 1.4 1 0 0 1 1 1 0 Toprim-like dTDP_sugar_isom PF00908.17 gi|407465849|ref|YP_006776731.1| - 1e-66 223.8 0.1 1.1e-66 223.6 0.1 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase Mannosyl_trans4 PF15971.5 gi|407465850|ref|YP_006776732.1| - 0.12 12.2 4.2 0.27 11.1 4.2 1.6 1 0 0 1 1 1 0 DolP-mannose mannosyltransferase TPR_1 PF00515.28 gi|407465851|ref|YP_006776733.1| - 8.2e-18 63.4 5.4 2.8e-07 30.1 0.1 4.7 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|407465851|ref|YP_006776733.1| - 1.2e-14 53.2 0.5 6.3e-05 22.8 0.0 4.5 4 1 0 4 4 4 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|407465851|ref|YP_006776733.1| - 1.5e-11 44.1 1.2 0.023 14.8 0.0 4.4 3 1 1 4 4 4 3 Fis1 C-terminal tetratricopeptide repeat TPR_17 PF13431.6 gi|407465851|ref|YP_006776733.1| - 1.1e-10 41.2 2.9 0.025 15.0 0.0 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|407465851|ref|YP_006776733.1| - 9.3e-10 38.9 0.3 0.00065 20.2 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|407465851|ref|YP_006776733.1| - 1.3e-09 37.5 1.3 0.09 13.0 0.0 4.1 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|407465851|ref|YP_006776733.1| - 2.2e-07 31.4 0.0 7.2e-05 23.4 0.0 2.4 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|407465851|ref|YP_006776733.1| - 7.2e-06 26.2 0.1 0.016 15.4 0.0 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|407465851|ref|YP_006776733.1| - 8.3e-05 23.1 0.0 6.4 7.9 0.0 3.8 2 2 2 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|407465851|ref|YP_006776733.1| - 0.0002 21.5 0.1 0.16 12.2 0.0 2.4 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 gi|407465851|ref|YP_006776733.1| - 0.00031 20.8 0.0 0.05 13.8 0.0 2.3 1 1 0 2 2 2 1 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|407465851|ref|YP_006776733.1| - 0.00052 19.5 0.0 0.0011 18.4 0.0 1.6 1 1 0 1 1 1 1 Coatomer epsilon subunit TPR_11 PF13414.6 gi|407465851|ref|YP_006776733.1| - 0.0024 17.5 1.9 0.26 11.0 0.0 3.0 2 1 1 3 3 3 1 TPR repeat Alkyl_sulf_dimr PF14863.6 gi|407465851|ref|YP_006776733.1| - 0.0038 17.7 0.0 0.18 12.2 0.0 2.2 1 1 1 2 2 2 1 Alkyl sulfatase dimerisation TPR_6 PF13174.6 gi|407465851|ref|YP_006776733.1| - 0.0082 16.7 0.2 6.5 7.6 0.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|407465851|ref|YP_006776733.1| - 0.0086 15.0 0.0 0.082 11.8 0.0 1.9 1 1 1 2 2 2 1 NMDA receptor-regulated protein 1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Thaumarchaeota/Candidatus_Nitrosopumilus_AR2_uid176130/NC_018656.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Thaumarchaeota/Candidatus_Nitrosopumilus_AR2_uid176130/NC_018656.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Thaumarchaeota/Candidatus_Nitrosopumilus_AR2_uid176130/NC_018656.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Thaumarchaeota/Candidatus_Nitrosopumilus_AR2_uid176130/NC_018656.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 16:19:52 2019 # [ok]