#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.6	gi|557693446|ref|YP_008796500.1|	-	1.4e-12	47.1	0.0	2.9e-12	46.1	0.0	1.5	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_16	PF13191.1	gi|557693446|ref|YP_008796500.1|	-	5e-08	33.1	0.3	1.8e-07	31.3	0.2	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557693446|ref|YP_008796500.1|	-	8.2e-08	32.4	0.1	2.9e-07	30.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|557693446|ref|YP_008796500.1|	-	3.1e-05	24.1	0.0	8e-05	22.8	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TIP49	PF06068.8	gi|557693446|ref|YP_008796500.1|	-	8.4e-05	21.4	0.1	0.04	12.6	0.0	2.2	2	0	0	2	2	2	2	TIP49	C-terminus
NACHT	PF05729.7	gi|557693446|ref|YP_008796500.1|	-	0.005	16.5	0.1	0.012	15.2	0.0	1.8	2	1	0	2	2	1	1	NACHT	domain
AAA_17	PF13207.1	gi|557693446|ref|YP_008796500.1|	-	0.017	15.8	1.7	0.089	13.6	1.2	2.3	1	1	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|557693446|ref|YP_008796500.1|	-	0.024	14.0	0.0	0.056	12.9	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AFG1_ATPase	PF03969.11	gi|557693446|ref|YP_008796500.1|	-	0.037	12.8	0.0	0.058	12.1	0.0	1.2	1	0	0	1	1	1	0	AFG1-like	ATPase
DUF4194	PF13835.1	gi|557693446|ref|YP_008796500.1|	-	0.04	13.3	0.1	0.34	10.3	0.0	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4194)
AAA_32	PF13654.1	gi|557693446|ref|YP_008796500.1|	-	0.06	12.0	0.4	2.8	6.4	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|557693446|ref|YP_008796500.1|	-	0.071	13.4	0.1	0.17	12.2	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
Sigma54_activ_2	PF14532.1	gi|557693446|ref|YP_008796500.1|	-	0.071	13.1	0.0	0.15	12.0	0.0	1.7	1	0	0	1	1	1	0	Sigma-54	interaction	domain
DUF815	PF05673.8	gi|557693446|ref|YP_008796500.1|	-	0.074	11.9	0.0	0.14	11.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
RuvB_N	PF05496.7	gi|557693446|ref|YP_008796500.1|	-	0.077	12.0	0.0	0.59	9.1	0.0	2.1	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_19	PF13245.1	gi|557693446|ref|YP_008796500.1|	-	0.098	12.4	0.0	0.28	10.9	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
RFX_DNA_binding	PF02257.10	gi|557693446|ref|YP_008796500.1|	-	0.11	12.5	0.0	0.35	11.0	0.0	1.7	2	0	0	2	2	1	0	RFX	DNA-binding	domain
Zeta_toxin	PF06414.7	gi|557693446|ref|YP_008796500.1|	-	0.12	11.4	0.0	0.22	10.5	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
UPF0079	PF02367.12	gi|557693446|ref|YP_008796500.1|	-	0.13	11.8	0.1	0.26	10.9	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA	PF00004.24	gi|557693447|ref|YP_008796501.1|	-	1.1e-13	51.5	0.0	5.4e-13	49.2	0.0	2.2	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|557693447|ref|YP_008796501.1|	-	1.7e-12	46.8	0.0	1.4e-06	27.2	0.0	2.2	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
AAA_22	PF13401.1	gi|557693447|ref|YP_008796501.1|	-	7.5e-08	32.5	1.1	1.1e-05	25.5	0.1	3.1	2	2	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|557693447|ref|YP_008796501.1|	-	5.8e-07	29.6	1.2	4.2e-06	26.8	0.0	2.6	1	1	1	2	2	2	1	AAA	ATPase	domain
RuvB_N	PF05496.7	gi|557693447|ref|YP_008796501.1|	-	6.6e-06	25.3	0.0	1.9e-05	23.8	0.0	1.8	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_2	PF07724.9	gi|557693447|ref|YP_008796501.1|	-	2.3e-05	24.3	0.0	5.7e-05	23.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_14	PF13173.1	gi|557693447|ref|YP_008796501.1|	-	0.00019	21.3	0.0	0.00043	20.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
DUF815	PF05673.8	gi|557693447|ref|YP_008796501.1|	-	0.00029	19.8	0.0	0.00049	19.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
Bac_DnaA	PF00308.13	gi|557693447|ref|YP_008796501.1|	-	0.0012	18.5	0.2	0.018	14.6	0.1	2.4	1	1	0	1	1	1	1	Bacterial	dnaA	protein
AAA_17	PF13207.1	gi|557693447|ref|YP_008796501.1|	-	0.0016	19.2	0.1	0.0058	17.4	0.1	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|557693447|ref|YP_008796501.1|	-	0.0019	18.0	0.1	0.019	14.8	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|557693447|ref|YP_008796501.1|	-	0.0029	17.3	0.0	0.0085	15.8	0.0	1.9	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Arch_ATPase	PF01637.13	gi|557693447|ref|YP_008796501.1|	-	0.0034	17.1	0.3	0.011	15.4	0.0	2.1	2	1	0	2	2	2	1	Archaeal	ATPase
DUF258	PF03193.11	gi|557693447|ref|YP_008796501.1|	-	0.006	15.7	0.0	0.011	14.9	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AFG1_ATPase	PF03969.11	gi|557693447|ref|YP_008796501.1|	-	0.0076	15.0	0.0	0.013	14.3	0.0	1.3	1	0	0	1	1	1	1	AFG1-like	ATPase
AAA_24	PF13479.1	gi|557693447|ref|YP_008796501.1|	-	0.021	14.3	0.0	0.043	13.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|557693447|ref|YP_008796501.1|	-	0.035	13.6	0.6	0.084	12.4	0.0	1.9	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
Miro	PF08477.8	gi|557693447|ref|YP_008796501.1|	-	0.038	14.4	0.1	0.17	12.4	0.1	2.2	1	1	0	1	1	1	0	Miro-like	protein
TIP49	PF06068.8	gi|557693447|ref|YP_008796501.1|	-	0.043	12.5	0.1	0.34	9.5	0.0	2.1	2	1	0	2	2	2	0	TIP49	C-terminus
MMR_HSR1	PF01926.18	gi|557693447|ref|YP_008796501.1|	-	0.046	13.6	0.0	0.15	12.0	0.0	1.9	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
NACHT	PF05729.7	gi|557693447|ref|YP_008796501.1|	-	0.047	13.3	0.0	1.1	8.8	0.0	2.5	2	0	0	2	2	2	0	NACHT	domain
DNA_pol3_delta	PF06144.8	gi|557693447|ref|YP_008796501.1|	-	0.047	13.1	0.0	0.16	11.4	0.0	1.9	2	0	0	2	2	1	0	DNA	polymerase	III,	delta	subunit
IstB_IS21	PF01695.12	gi|557693447|ref|YP_008796501.1|	-	0.065	12.6	0.0	0.14	11.5	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
RFC1	PF08519.7	gi|557693447|ref|YP_008796501.1|	-	0.066	12.9	0.1	0.12	12.1	0.0	1.4	1	0	0	1	1	1	0	Replication	factor	RFC1	C	terminal	domain
AAA_28	PF13521.1	gi|557693447|ref|YP_008796501.1|	-	0.069	13.1	0.3	0.6	10.0	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|557693447|ref|YP_008796501.1|	-	0.13	11.8	1.1	0.89	9.1	0.8	2.3	1	1	0	1	1	1	0	AAA	domain
Rep_fac_C	PF08542.6	gi|557693448|ref|YP_008796502.1|	-	9.3e-20	70.4	0.1	3.6e-19	68.5	0.0	2.0	2	0	0	2	2	2	1	Replication	factor	C	C-terminal	domain
DNA_pol3_delta2	PF13177.1	gi|557693448|ref|YP_008796502.1|	-	3.4e-15	56.0	0.0	1.3e-13	50.9	0.0	2.3	1	1	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA	PF00004.24	gi|557693448|ref|YP_008796502.1|	-	6.4e-15	55.5	0.0	1.4e-14	54.4	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|557693448|ref|YP_008796502.1|	-	1.1e-09	37.5	0.0	0.00012	20.8	0.0	2.1	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|557693448|ref|YP_008796502.1|	-	2.2e-08	33.4	0.0	6e-07	28.7	0.0	2.3	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
TIP49	PF06068.8	gi|557693448|ref|YP_008796502.1|	-	1.4e-06	27.2	0.0	0.0041	15.8	0.0	2.1	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_22	PF13401.1	gi|557693448|ref|YP_008796502.1|	-	5.9e-06	26.4	0.0	0.071	13.2	0.0	2.8	2	1	1	3	3	3	2	AAA	domain
AAA_16	PF13191.1	gi|557693448|ref|YP_008796502.1|	-	8.3e-06	25.9	0.0	2.3e-05	24.4	0.0	2.1	1	1	0	1	1	1	1	AAA	ATPase	domain
DNA_pol3_delta	PF06144.8	gi|557693448|ref|YP_008796502.1|	-	1e-05	25.1	0.0	1.6e-05	24.5	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA_14	PF13173.1	gi|557693448|ref|YP_008796502.1|	-	9.4e-05	22.3	0.0	0.00025	20.9	0.0	1.7	1	1	1	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.16	gi|557693448|ref|YP_008796502.1|	-	0.0002	20.6	0.0	0.0025	17.0	0.0	2.3	2	1	1	3	3	3	1	Magnesium	chelatase,	subunit	ChlI
ResIII	PF04851.10	gi|557693448|ref|YP_008796502.1|	-	0.00023	21.0	0.0	0.00043	20.1	0.0	1.5	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|557693448|ref|YP_008796502.1|	-	0.00045	19.9	0.0	0.00097	18.8	0.0	1.7	1	1	0	1	1	1	1	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|557693448|ref|YP_008796502.1|	-	0.0052	15.9	0.0	0.017	14.2	0.0	1.8	1	1	1	2	2	2	1	Zeta	toxin
AAA_11	PF13086.1	gi|557693448|ref|YP_008796502.1|	-	0.006	16.1	0.0	0.0083	15.7	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|557693448|ref|YP_008796502.1|	-	0.011	15.1	0.1	0.031	13.6	0.0	1.9	1	1	0	1	1	1	0	IstB-like	ATP	binding	protein
FtsK_SpoIIIE	PF01580.13	gi|557693448|ref|YP_008796502.1|	-	0.014	14.8	0.0	0.026	14.0	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
PhoH	PF02562.11	gi|557693448|ref|YP_008796502.1|	-	0.021	14.0	0.0	0.047	12.9	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
AAA_33	PF13671.1	gi|557693448|ref|YP_008796502.1|	-	0.021	14.6	0.0	0.039	13.8	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
DUF815	PF05673.8	gi|557693448|ref|YP_008796502.1|	-	0.026	13.4	0.0	0.091	11.6	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
Sigma54_activat	PF00158.21	gi|557693448|ref|YP_008796502.1|	-	0.03	13.7	0.1	0.099	12.1	0.0	1.8	2	0	0	2	2	2	0	Sigma-54	interaction	domain
DNA_pol3_gamma3	PF12169.3	gi|557693448|ref|YP_008796502.1|	-	0.034	13.9	0.0	0.074	12.8	0.0	1.6	1	0	0	1	1	1	0	DNA	polymerase	III	subunits	gamma	and	tau	domain	III
AAA_30	PF13604.1	gi|557693448|ref|YP_008796502.1|	-	0.038	13.5	0.0	0.1	12.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_3	PF07726.6	gi|557693448|ref|YP_008796502.1|	-	0.043	13.4	0.0	0.094	12.3	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|557693448|ref|YP_008796502.1|	-	0.049	13.9	0.0	0.26	11.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
HupH_C	PF04809.8	gi|557693448|ref|YP_008796502.1|	-	0.067	12.9	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	HupH	hydrogenase	expression	protein,	C-terminal	conserved	region
T2SE	PF00437.15	gi|557693448|ref|YP_008796502.1|	-	0.074	11.9	0.0	0.15	10.8	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|557693448|ref|YP_008796502.1|	-	0.099	13.4	0.0	0.23	12.2	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|557693448|ref|YP_008796502.1|	-	0.099	12.0	0.1	0.34	10.2	0.0	1.9	1	1	0	2	2	2	0	AAA	domain
AAA_5	PF07728.9	gi|557693448|ref|YP_008796502.1|	-	0.13	12.0	0.0	0.37	10.5	0.0	1.8	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
RNA_helicase	PF00910.17	gi|557693448|ref|YP_008796502.1|	-	0.15	12.2	0.0	0.31	11.2	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
TatD_DNase	PF01026.16	gi|557693449|ref|YP_008796503.1|	-	1.2e-57	195.0	0.0	1.4e-57	194.8	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
Lactamase_B_3	PF13483.1	gi|557693451|ref|YP_008796505.1|	-	8.1e-35	119.9	0.1	9.9e-35	119.6	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|557693451|ref|YP_008796505.1|	-	9.4e-23	80.7	0.0	1.2e-22	80.4	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|557693451|ref|YP_008796505.1|	-	0.0075	15.9	6.9	0.094	12.3	4.8	2.1	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
SnoaL_3	PF13474.1	gi|557693453|ref|YP_008796507.1|	-	8.8e-11	41.9	0.0	1.1e-10	41.6	0.0	1.1	1	0	0	1	1	1	1	SnoaL-like	domain
DUF4440	PF14534.1	gi|557693453|ref|YP_008796507.1|	-	0.00026	21.1	0.0	0.00035	20.7	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4440)
CaMKII_AD	PF08332.5	gi|557693453|ref|YP_008796507.1|	-	0.016	15.0	0.0	0.11	12.3	0.0	2.0	2	0	0	2	2	2	0	Calcium/calmodulin	dependent	protein	kinase	II	Association
DUF3636	PF12331.3	gi|557693455|ref|YP_008796509.1|	-	0.013	15.0	0.0	0.018	14.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3636)
CENP-O	PF09496.5	gi|557693455|ref|YP_008796509.1|	-	0.14	12.4	0.0	0.26	11.5	0.0	1.5	1	0	0	1	1	1	0	Cenp-O	kinetochore	centromere	component
DUF372	PF04036.7	gi|557693456|ref|YP_008796510.1|	-	1e-12	47.3	0.2	1.5e-12	46.7	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF372)
DUF381	PF04038.7	gi|557693456|ref|YP_008796510.1|	-	1.5e-08	34.5	0.0	2e-08	34.1	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF381)
DnaJ	PF00226.26	gi|557693457|ref|YP_008796511.1|	-	6.8e-30	102.6	2.6	1.1e-29	101.9	1.8	1.4	1	0	0	1	1	1	1	DnaJ	domain
CTDII	PF01556.13	gi|557693457|ref|YP_008796511.1|	-	4.2e-15	55.4	0.2	1.4e-06	28.1	0.0	3.2	3	0	0	3	3	3	2	DnaJ	C	terminal	domain
DnaJ_CXXCXGXG	PF00684.14	gi|557693457|ref|YP_008796511.1|	-	2.2e-11	43.6	15.3	3.8e-11	42.8	10.6	1.4	1	0	0	1	1	1	1	DnaJ	central	domain
DUF3782	PF12644.2	gi|557693457|ref|YP_008796511.1|	-	0.33	10.7	4.2	3.1	7.6	1.1	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3782)
DUF2703	PF10865.3	gi|557693457|ref|YP_008796511.1|	-	1	9.3	4.7	16	5.4	0.1	3.3	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF2703)
Antiterm	PF03589.8	gi|557693457|ref|YP_008796511.1|	-	1.3	9.1	12.9	1.5	8.9	1.0	3.6	1	1	2	3	3	3	0	Antitermination	protein
zf-FPG_IleRS	PF06827.9	gi|557693457|ref|YP_008796511.1|	-	1.4	8.6	9.1	20	4.9	0.4	3.4	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
HSP70	PF00012.15	gi|557693458|ref|YP_008796512.1|	-	7e-224	744.2	6.0	4.7e-206	685.3	3.2	2.0	1	1	1	2	2	2	2	Hsp70	protein
MreB_Mbl	PF06723.8	gi|557693458|ref|YP_008796512.1|	-	1.4e-18	66.5	3.1	1.7e-17	63.0	2.2	2.3	1	1	0	1	1	1	1	MreB/Mbl	protein
FGGY_C	PF02782.11	gi|557693458|ref|YP_008796512.1|	-	4.9e-05	23.0	0.0	0.00011	21.8	0.0	1.5	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
StbA	PF06406.6	gi|557693458|ref|YP_008796512.1|	-	0.00027	19.9	0.1	0.003	16.5	0.1	2.4	2	1	1	3	3	3	1	StbA	protein
DUF45	PF01863.12	gi|557693458|ref|YP_008796512.1|	-	0.022	14.5	0.9	0.051	13.3	0.7	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF45
NCA2	PF08637.5	gi|557693458|ref|YP_008796512.1|	-	0.049	12.5	0.3	0.085	11.7	0.2	1.3	1	0	0	1	1	1	0	ATP	synthase	regulation	protein	NCA2
Hydantoinase_A	PF01968.13	gi|557693458|ref|YP_008796512.1|	-	0.13	11.3	1.7	0.28	10.2	0.0	2.4	3	0	0	3	3	3	0	Hydantoinase/oxoprolinase
FtsA	PF14450.1	gi|557693458|ref|YP_008796512.1|	-	1.2	8.9	11.5	3	7.7	0.3	4.8	4	2	0	4	4	4	0	Cell	division	protein	FtsA
DUF1090	PF06476.7	gi|557693458|ref|YP_008796512.1|	-	2.4	7.8	10.1	5.2	6.7	7.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1090)
GrpE	PF01025.14	gi|557693459|ref|YP_008796513.1|	-	4.7e-40	136.8	1.7	5.6e-40	136.5	1.2	1.0	1	0	0	1	1	1	1	GrpE
AAA_32	PF13654.1	gi|557693459|ref|YP_008796513.1|	-	0.036	12.7	0.9	0.041	12.5	0.6	1.2	1	0	0	1	1	1	0	AAA	domain
GTPase_Cys_C	PF12631.2	gi|557693459|ref|YP_008796513.1|	-	0.06	13.7	2.0	0.22	11.9	0.1	2.4	2	1	1	3	3	3	0	Catalytic	cysteine-containing	C-terminus	of	GTPase,	MnmE
Baculo_PEP_C	PF04513.7	gi|557693459|ref|YP_008796513.1|	-	0.064	13.0	0.4	0.089	12.6	0.3	1.3	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Exonuc_V_gamma	PF04257.9	gi|557693459|ref|YP_008796513.1|	-	0.099	10.6	0.1	0.12	10.3	0.1	1.1	1	0	0	1	1	1	0	Exodeoxyribonuclease	V,	gamma	subunit
KxDL	PF10241.4	gi|557693459|ref|YP_008796513.1|	-	0.1	12.4	0.8	0.21	11.5	0.6	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein
COG2	PF06148.6	gi|557693459|ref|YP_008796513.1|	-	0.11	12.4	3.2	0.23	11.3	2.2	1.5	1	0	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF3348	PF11828.3	gi|557693459|ref|YP_008796513.1|	-	0.31	10.4	5.2	0.42	10.0	3.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3348)
MutS_III	PF05192.13	gi|557693459|ref|YP_008796513.1|	-	0.38	10.5	1.7	0.6	9.8	1.2	1.5	1	1	0	1	1	1	0	MutS	domain	III
CR6_interact	PF10147.4	gi|557693459|ref|YP_008796513.1|	-	0.45	9.8	4.3	0.6	9.4	3.0	1.2	1	0	0	1	1	1	0	Growth	arrest	and	DNA-damage-inducible	proteins-interacting	protein	1
CARDB	PF07705.6	gi|557693460|ref|YP_008796514.1|	-	0.084	12.9	0.1	0.36	10.9	0.0	2.2	1	0	0	1	1	1	0	CARDB
DUF354	PF04007.7	gi|557693461|ref|YP_008796515.1|	-	6e-44	150.2	0.0	7.1e-44	150.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF354)
LisH	PF08513.6	gi|557693461|ref|YP_008796515.1|	-	0.14	11.9	0.1	15	5.5	0.0	2.7	3	0	0	3	3	3	0	LisH
Glycos_transf_4	PF00953.16	gi|557693462|ref|YP_008796516.1|	-	7.6e-25	87.5	8.2	7.6e-25	87.5	5.7	1.9	1	1	0	1	1	1	1	Glycosyl	transferase	family	4
GFO_IDH_MocA	PF01408.17	gi|557693465|ref|YP_008796519.1|	-	1.6e-32	112.5	0.1	2.6e-32	111.8	0.1	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|557693465|ref|YP_008796519.1|	-	4.5e-08	32.8	0.0	1.5e-07	31.1	0.0	1.9	1	1	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
Semialdhyde_dh	PF01118.19	gi|557693465|ref|YP_008796519.1|	-	6.7e-07	29.6	0.0	1.4e-06	28.6	0.0	1.6	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
ADH_zinc_N	PF00107.21	gi|557693465|ref|YP_008796519.1|	-	0.00029	20.3	0.0	0.00059	19.3	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_3	PF03447.11	gi|557693465|ref|YP_008796519.1|	-	0.00046	20.5	0.1	0.0024	18.2	0.0	2.0	2	0	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|557693465|ref|YP_008796519.1|	-	0.031	14.6	0.0	0.1	13.0	0.0	1.9	1	1	1	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|557693465|ref|YP_008796519.1|	-	0.038	14.0	0.0	0.064	13.3	0.0	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
CoA_binding	PF02629.14	gi|557693465|ref|YP_008796519.1|	-	0.061	13.8	0.0	0.13	12.7	0.0	1.6	1	0	0	1	1	1	0	CoA	binding	domain
Lipase_GDSL_2	PF13472.1	gi|557693465|ref|YP_008796519.1|	-	0.078	13.0	0.0	0.35	10.9	0.0	2.0	2	1	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase	family
Herpes_UL42	PF02282.11	gi|557693465|ref|YP_008796519.1|	-	0.096	12.2	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	DNA	polymerase	processivity	factor	(UL42)
KaiC	PF06745.8	gi|557693466|ref|YP_008796520.1|	-	6.4e-16	58.1	0.0	7.9e-16	57.8	0.0	1.0	1	0	0	1	1	1	1	KaiC
DUF835	PF05763.7	gi|557693466|ref|YP_008796520.1|	-	0.0064	16.0	0.0	0.039	13.5	0.0	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
GvpD	PF07088.6	gi|557693466|ref|YP_008796520.1|	-	0.051	11.9	0.2	0.047	12.0	0.1	1.2	1	1	0	1	1	1	0	GvpD	gas	vesicle	protein
PolC_DP2	PF03833.8	gi|557693467|ref|YP_008796521.1|	-	6.8e-06	24.0	0.1	8.1e-06	23.8	0.1	1.0	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
Sec34	PF04136.10	gi|557693468|ref|YP_008796522.1|	-	0.003	17.2	0.6	2.3	7.9	0.0	2.2	2	0	0	2	2	2	2	Sec34-like	family
DUF2312	PF10073.4	gi|557693468|ref|YP_008796522.1|	-	0.041	13.2	0.6	0.16	11.3	0.1	2.2	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
Methyltransf_26	PF13659.1	gi|557693470|ref|YP_008796524.1|	-	6.3e-17	61.6	0.0	3.8e-16	59.1	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|557693470|ref|YP_008796524.1|	-	2.1e-11	43.5	0.0	7.9e-06	25.1	0.0	3.4	3	0	0	3	3	3	2	N-6	DNA	Methylase
Eco57I	PF07669.6	gi|557693470|ref|YP_008796524.1|	-	6.7e-09	36.0	0.1	1.7e-08	34.7	0.1	1.6	1	0	0	1	1	1	1	Eco57I	restriction-modification	methylase
UPF0020	PF01170.13	gi|557693470|ref|YP_008796524.1|	-	0.011	15.2	0.0	0.21	11.1	0.0	2.7	3	0	0	3	3	3	0	Putative	RNA	methylase	family	UPF0020
PLDc_2	PF13091.1	gi|557693471|ref|YP_008796525.1|	-	3.3e-14	52.7	0.0	8e-14	51.4	0.0	1.7	1	0	0	1	1	1	1	PLD-like	domain
SNF2_N	PF00176.18	gi|557693471|ref|YP_008796525.1|	-	5e-13	48.5	3.4	4.4e-08	32.2	0.0	4.0	3	1	1	4	4	4	2	SNF2	family	N-terminal	domain
Helicase_C	PF00271.26	gi|557693471|ref|YP_008796525.1|	-	9.6e-12	44.6	0.0	2.7e-11	43.1	0.0	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|557693471|ref|YP_008796525.1|	-	7.2e-09	35.7	0.0	0.0051	16.6	0.0	2.7	1	1	1	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
Flavi_DEAD	PF07652.9	gi|557693471|ref|YP_008796525.1|	-	4.8e-06	26.4	0.0	0.00025	20.8	0.0	2.8	1	1	0	1	1	1	1	Flavivirus	DEAD	domain
AAA_22	PF13401.1	gi|557693471|ref|YP_008796525.1|	-	2.6e-05	24.3	0.1	0.00016	21.7	0.0	2.5	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|557693471|ref|YP_008796525.1|	-	6.5e-05	22.4	0.1	0.0012	18.2	0.1	2.5	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
DEAD	PF00270.24	gi|557693471|ref|YP_008796525.1|	-	0.0016	17.9	0.1	0.33	10.4	0.0	2.7	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
BID	PF06393.6	gi|557693471|ref|YP_008796525.1|	-	0.013	14.8	0.0	0.031	13.6	0.0	1.6	1	0	0	1	1	1	0	BH3	interacting	domain	(BID)
Mad3_BUB1_I	PF08311.7	gi|557693471|ref|YP_008796525.1|	-	0.085	12.6	3.2	4.5	7.0	0.0	3.3	3	0	0	3	3	3	0	Mad3/BUB1	homology	region	1
Excalibur	PF05901.6	gi|557693473|ref|YP_008796527.1|	-	0.00059	20.1	2.0	0.0011	19.2	1.4	1.5	1	1	0	1	1	1	1	Excalibur	calcium-binding	domain
TrmB	PF01978.14	gi|557693474|ref|YP_008796528.1|	-	2.2e-05	24.0	0.1	2.7e-05	23.7	0.1	1.1	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF977	PF06163.6	gi|557693474|ref|YP_008796528.1|	-	6e-05	22.7	0.1	7.7e-05	22.4	0.1	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF977)
MarR_2	PF12802.2	gi|557693474|ref|YP_008796528.1|	-	0.00017	21.1	0.0	0.00027	20.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|557693474|ref|YP_008796528.1|	-	0.0054	17.0	0.0	0.0094	16.2	0.0	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF387	PF04079.11	gi|557693474|ref|YP_008796528.1|	-	0.026	13.8	0.3	0.03	13.7	0.2	1.1	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
HTH_24	PF13412.1	gi|557693474|ref|YP_008796528.1|	-	0.035	13.4	0.1	0.049	13.0	0.1	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|557693474|ref|YP_008796528.1|	-	0.035	13.9	0.1	0.048	13.4	0.1	1.2	1	0	0	1	1	1	0	Winged	helix-turn-helix
HTH_IclR	PF09339.5	gi|557693474|ref|YP_008796528.1|	-	0.084	12.4	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Rifin_STEVOR	PF02009.11	gi|557693474|ref|YP_008796528.1|	-	0.09	12.4	1.9	0.12	12.0	1.3	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
RPA_C	PF08784.6	gi|557693474|ref|YP_008796528.1|	-	0.16	12.4	0.0	0.27	11.6	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
DUF3666	PF12408.3	gi|557693475|ref|YP_008796529.1|	-	0.07	12.2	0.0	0.2	10.7	0.0	1.7	2	0	0	2	2	2	0	Ribose-5-phosphate	isomerase
CABIT	PF12736.2	gi|557693475|ref|YP_008796529.1|	-	0.086	11.8	0.0	0.12	11.3	0.0	1.3	1	0	0	1	1	1	0	Cell-cycle	sustaining,	positive	selection,
CbiA	PF01656.18	gi|557693476|ref|YP_008796530.1|	-	8.4e-38	129.7	0.0	1.1e-37	129.3	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|557693476|ref|YP_008796530.1|	-	2.1e-10	40.7	0.0	2.4e-06	27.5	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
MipZ	PF09140.6	gi|557693476|ref|YP_008796530.1|	-	2.2e-10	40.0	0.0	2.9e-05	23.2	0.0	2.2	1	1	1	2	2	2	2	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|557693476|ref|YP_008796530.1|	-	2.5e-08	33.3	0.0	8.7e-08	31.5	0.0	1.9	1	1	0	1	1	1	1	Anion-transporting	ATPase
YhjQ	PF06564.7	gi|557693476|ref|YP_008796530.1|	-	8.6e-07	28.5	0.0	0.03	13.6	0.0	2.1	2	0	0	2	2	2	2	YhjQ	protein
AAA_25	PF13481.1	gi|557693476|ref|YP_008796530.1|	-	4.3e-06	26.2	0.0	7.7e-06	25.4	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
Fer4_NifH	PF00142.13	gi|557693476|ref|YP_008796530.1|	-	2.5e-05	23.6	0.0	6.5e-05	22.2	0.0	1.6	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
VirC1	PF07015.6	gi|557693476|ref|YP_008796530.1|	-	5e-05	22.4	0.0	0.0016	17.5	0.0	2.1	2	0	0	2	2	2	1	VirC1	protein
AAA_17	PF13207.1	gi|557693476|ref|YP_008796530.1|	-	0.00031	21.5	0.1	0.00087	20.0	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|557693476|ref|YP_008796530.1|	-	0.004	16.6	0.0	0.17	11.2	0.0	2.2	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
AAA_18	PF13238.1	gi|557693476|ref|YP_008796530.1|	-	0.0061	16.8	0.1	0.046	14.0	0.1	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|557693476|ref|YP_008796530.1|	-	0.0083	15.8	0.1	0.017	14.8	0.1	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|557693476|ref|YP_008796530.1|	-	0.072	13.0	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
RNA_helicase	PF00910.17	gi|557693476|ref|YP_008796530.1|	-	0.073	13.2	0.0	0.24	11.6	0.0	1.8	2	0	0	2	2	2	0	RNA	helicase
ATP_bind_1	PF03029.12	gi|557693476|ref|YP_008796530.1|	-	0.088	12.3	0.1	0.96	8.9	0.0	2.1	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
Laps	PF10169.4	gi|557693477|ref|YP_008796531.1|	-	1.5	9.0	4.7	0.69	10.1	0.1	2.0	1	1	1	2	2	2	0	Learning-associated	protein
PQQ	PF01011.16	gi|557693478|ref|YP_008796532.1|	-	0.0004	19.7	0.8	0.13	11.8	0.3	3.7	3	0	0	3	3	3	1	PQQ	enzyme	repeat
PQQ_2	PF13360.1	gi|557693478|ref|YP_008796532.1|	-	0.0024	17.3	0.0	0.55	9.6	0.0	3.1	2	2	1	3	3	3	2	PQQ-like	domain
LSM14	PF12701.2	gi|557693478|ref|YP_008796532.1|	-	0.046	13.5	0.0	0.1	12.4	0.0	1.5	1	0	0	1	1	1	0	Scd6-like	Sm	domain
PQQ_3	PF13570.1	gi|557693478|ref|YP_008796532.1|	-	7.8	6.9	12.6	0.31	11.3	0.2	4.5	5	1	0	5	5	5	0	PQQ-like	domain
DUF559	PF04480.7	gi|557693479|ref|YP_008796533.1|	-	0.018	14.6	0.1	0.023	14.3	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF559)
AAA_21	PF13304.1	gi|557693481|ref|YP_008796535.1|	-	6.4e-24	85.4	0.5	2.1e-23	83.7	0.4	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|557693481|ref|YP_008796535.1|	-	2.3e-23	82.9	0.5	8e-14	51.5	0.1	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|557693481|ref|YP_008796535.1|	-	1.6e-09	37.2	0.5	6.8e-07	28.7	0.1	2.3	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|557693481|ref|YP_008796535.1|	-	4.2e-08	33.7	0.2	1.2e-07	32.2	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
DUF2813	PF11398.3	gi|557693481|ref|YP_008796535.1|	-	7e-08	31.9	1.3	3.2e-06	26.4	0.1	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2813)
DUF3696	PF12476.3	gi|557693481|ref|YP_008796535.1|	-	2.5e-05	24.1	0.0	0.00011	22.1	0.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3696)
Arch_ATPase	PF01637.13	gi|557693481|ref|YP_008796535.1|	-	0.00011	21.9	0.3	0.001	18.8	0.0	2.3	2	1	0	2	2	2	1	Archaeal	ATPase
ABC_tran	PF00005.22	gi|557693481|ref|YP_008796535.1|	-	0.00026	21.3	0.0	0.00054	20.2	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_29	PF13555.1	gi|557693481|ref|YP_008796535.1|	-	0.00084	18.8	0.1	0.0034	16.8	0.0	2.0	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|557693481|ref|YP_008796535.1|	-	0.02	14.8	0.2	0.055	13.4	0.0	1.7	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_13	PF13166.1	gi|557693481|ref|YP_008796535.1|	-	0.027	12.9	0.2	1.8	6.9	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|557693481|ref|YP_008796535.1|	-	0.028	14.3	0.0	0.5	10.2	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
DUF72	PF01904.13	gi|557693482|ref|YP_008796536.1|	-	4.2e-33	115.0	0.0	6.5e-33	114.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
DUF72	PF01904.13	gi|557693483|ref|YP_008796537.1|	-	3e-64	216.9	0.0	4.1e-64	216.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
CarboxypepD_reg	PF13620.1	gi|557693485|ref|YP_008796539.1|	-	1.1e-22	79.8	20.5	0.00017	21.5	0.3	8.4	7	1	1	8	8	8	6	Carboxypeptidase	regulatory-like	domain
Y_Y_Y	PF07495.8	gi|557693485|ref|YP_008796539.1|	-	8.5e-09	35.0	0.1	0.63	9.8	0.0	5.3	5	0	0	5	5	5	3	Y_Y_Y	domain
DUF4198	PF10670.4	gi|557693485|ref|YP_008796539.1|	-	0.00039	20.4	1.2	0.15	12.0	0.0	3.8	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF4198)
DUF2012	PF09430.5	gi|557693485|ref|YP_008796539.1|	-	0.00054	19.8	0.7	8.7	6.2	0.0	4.2	4	0	0	4	4	4	1	Protein	of	unknown	function	(DUF2012)
FlgD_ig	PF13860.1	gi|557693485|ref|YP_008796539.1|	-	0.00071	19.2	1.7	7.8	6.3	0.0	5.8	5	1	1	6	6	6	1	FlgD	Ig-like	domain
DUF4480	PF13715.1	gi|557693485|ref|YP_008796539.1|	-	0.00085	19.3	0.3	2	8.5	0.0	5.1	7	0	0	7	7	7	1	Domain	of	unknown	function	(DUF4480)
Cna_B	PF05738.8	gi|557693485|ref|YP_008796539.1|	-	0.0011	18.7	1.2	12	5.7	0.0	4.9	6	0	0	6	6	6	1	Cna	protein	B-type	domain
Big_3_4	PF13754.1	gi|557693485|ref|YP_008796539.1|	-	0.015	15.5	0.0	56	4.1	0.0	4.9	4	0	0	4	4	4	0	Bacterial	Ig-like	domain	(group	3)
DUF4397	PF14344.1	gi|557693485|ref|YP_008796539.1|	-	0.051	13.9	0.6	2.4	8.4	0.0	3.4	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4397)
HIG_1_N	PF04588.8	gi|557693485|ref|YP_008796539.1|	-	0.079	12.7	0.2	0.19	11.5	0.1	1.7	1	0	0	1	1	1	0	Hypoxia	induced	protein	conserved	region
HNF-1B_C	PF04812.8	gi|557693486|ref|YP_008796540.1|	-	0.075	12.2	1.1	0.089	12.0	0.7	1.1	1	0	0	1	1	1	0	Hepatocyte	nuclear	factor	1	(HNF-1),	beta	isoform	C	terminus
PSI_PsaJ	PF01701.13	gi|557693486|ref|YP_008796540.1|	-	2.2	8.1	6.0	0.86	9.4	1.9	2.0	2	0	0	2	2	2	0	Photosystem	I	reaction	centre	subunit	IX	/	PsaJ
DUF1625	PF07787.7	gi|557693486|ref|YP_008796540.1|	-	4.7	6.3	6.0	5.4	6.1	4.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1625)
PALP	PF00291.20	gi|557693487|ref|YP_008796541.1|	-	2.2e-70	237.2	1.9	2.7e-70	237.0	1.3	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
PA	PF02225.17	gi|557693487|ref|YP_008796541.1|	-	0.0055	16.3	0.3	0.012	15.2	0.2	1.5	1	0	0	1	1	1	1	PA	domain
HypA	PF01155.14	gi|557693487|ref|YP_008796541.1|	-	0.064	12.9	0.1	0.12	12.1	0.0	1.4	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
ACP_syn_III_C	PF08541.5	gi|557693487|ref|YP_008796541.1|	-	0.23	11.5	1.2	18	5.4	0.0	3.2	2	1	1	3	3	3	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
RtcB	PF01139.12	gi|557693488|ref|YP_008796542.1|	-	1.6e-138	462.2	0.1	2.1e-115	386.0	0.0	2.1	2	0	0	2	2	2	2	tRNA-splicing	ligase	RtcB
Intein_splicing	PF14890.1	gi|557693488|ref|YP_008796542.1|	-	1.3e-11	44.0	0.1	8.9e-05	21.5	0.3	2.8	3	0	0	3	3	3	2	Intein	splicing	domain
LAGLIDADG_3	PF14528.1	gi|557693488|ref|YP_008796542.1|	-	1.4e-08	34.8	0.1	0.002	18.2	0.0	2.7	2	0	0	2	2	2	2	LAGLIDADG-like	domain
Hint_2	PF13403.1	gi|557693488|ref|YP_008796542.1|	-	0.091	12.6	0.0	5.9	6.8	0.0	2.5	2	0	0	2	2	2	0	Hint	domain
Hom_end_hint	PF05203.11	gi|557693488|ref|YP_008796542.1|	-	0.15	11.7	0.0	0.34	10.6	0.0	1.6	1	0	0	1	1	1	0	Hom_end-associated	Hint
Aldedh	PF00171.17	gi|557693489|ref|YP_008796543.1|	-	1.5e-147	491.6	0.8	1.7e-147	491.5	0.6	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
DUF1487	PF07368.6	gi|557693489|ref|YP_008796543.1|	-	5.9e-05	22.3	0.1	0.00019	20.7	0.0	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1487)
NERD	PF08378.6	gi|557693490|ref|YP_008796544.1|	-	0.00088	19.5	0.2	0.0035	17.6	0.0	2.1	1	1	0	2	2	2	1	Nuclease-related	domain
Takusan	PF04822.8	gi|557693490|ref|YP_008796544.1|	-	0.079	12.7	1.0	0.21	11.3	0.2	2.0	2	0	0	2	2	2	0	Takusan
PIN	PF01850.16	gi|557693492|ref|YP_008796546.1|	-	6.1e-13	49.1	0.1	1.5e-12	47.8	0.1	1.6	1	1	0	1	1	1	1	PIN	domain
DUF217	PF02697.9	gi|557693493|ref|YP_008796547.1|	-	8.2e-05	22.7	3.8	9e-05	22.6	2.6	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
AsnC_trans_reg	PF01037.16	gi|557693494|ref|YP_008796548.1|	-	4.2e-16	58.4	0.0	6.4e-16	57.8	0.0	1.2	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|557693494|ref|YP_008796548.1|	-	1.3e-15	56.4	0.2	2.4e-15	55.6	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|557693494|ref|YP_008796548.1|	-	3.7e-14	51.9	1.1	6.5e-14	51.1	0.7	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
Arc_trans_TRASH	PF08394.5	gi|557693494|ref|YP_008796548.1|	-	1.2e-07	31.7	4.0	2.2e-07	30.9	2.8	1.5	1	0	0	1	1	1	1	Archaeal	TRASH	domain
MarR	PF01047.17	gi|557693494|ref|YP_008796548.1|	-	1.8e-07	30.7	0.1	3.8e-07	29.7	0.0	1.5	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|557693494|ref|YP_008796548.1|	-	9.5e-06	25.1	0.1	1.6e-05	24.4	0.1	1.4	1	0	0	1	1	1	1	MarR	family
zf-FCS	PF06467.9	gi|557693494|ref|YP_008796548.1|	-	4.6e-05	22.9	0.9	6.9e-05	22.4	0.3	1.6	2	0	0	2	2	2	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
HTH_11	PF08279.7	gi|557693494|ref|YP_008796548.1|	-	0.00031	20.3	0.1	0.0006	19.3	0.1	1.5	1	0	0	1	1	1	1	HTH	domain
GntR	PF00392.16	gi|557693494|ref|YP_008796548.1|	-	0.002	17.5	0.1	0.0038	16.6	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
ATPase-cat_bd	PF12156.3	gi|557693494|ref|YP_008796548.1|	-	0.0026	18.2	1.5	0.0046	17.4	1.0	1.4	1	0	0	1	1	1	1	Putative	metal-binding	domain	of	cation	transport	ATPase
HTH_DeoR	PF08220.7	gi|557693494|ref|YP_008796548.1|	-	0.0029	17.0	0.1	0.0057	16.1	0.1	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
YHS	PF04945.8	gi|557693494|ref|YP_008796548.1|	-	0.0038	17.0	0.1	0.0065	16.2	0.1	1.3	1	0	0	1	1	1	1	YHS	domain
HTH_IclR	PF09339.5	gi|557693494|ref|YP_008796548.1|	-	0.0096	15.4	0.0	0.016	14.7	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|557693494|ref|YP_008796548.1|	-	0.011	15.5	0.0	0.02	14.6	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.14	gi|557693494|ref|YP_008796548.1|	-	0.013	15.1	0.0	0.046	13.4	0.0	1.8	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
EAP30	PF04157.11	gi|557693494|ref|YP_008796548.1|	-	0.046	12.8	0.0	0.071	12.2	0.0	1.3	1	0	0	1	1	1	0	EAP30/Vps36	family
Fe_dep_repress	PF01325.14	gi|557693494|ref|YP_008796548.1|	-	0.095	12.6	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Mga	PF05043.8	gi|557693494|ref|YP_008796548.1|	-	0.13	12.5	0.0	0.26	11.5	0.0	1.4	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
DUF716	PF04819.7	gi|557693495|ref|YP_008796549.1|	-	0.02	14.3	1.1	0.023	14.1	0.7	1.0	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF716)
SSF	PF00474.12	gi|557693495|ref|YP_008796549.1|	-	0.076	11.6	2.0	0.087	11.4	1.4	1.0	1	0	0	1	1	1	0	Sodium:solute	symporter	family
DUF4231	PF14015.1	gi|557693495|ref|YP_008796549.1|	-	0.13	12.2	3.5	0.16	11.9	2.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
E1-E2_ATPase	PF00122.15	gi|557693496|ref|YP_008796550.1|	-	1.1e-60	204.5	1.5	2.2e-60	203.5	1.0	1.5	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|557693496|ref|YP_008796550.1|	-	2.7e-52	178.2	2.4	5.4e-52	177.3	1.7	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.21	gi|557693496|ref|YP_008796550.1|	-	3.2e-32	110.4	0.5	1.2e-14	54.1	0.0	2.7	2	0	0	2	2	2	2	Heavy-metal-associated	domain
HAD	PF12710.2	gi|557693496|ref|YP_008796550.1|	-	2.7e-18	66.8	0.0	5.4e-18	65.8	0.0	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|557693496|ref|YP_008796550.1|	-	3.1e-07	30.2	0.5	0.0032	17.0	0.1	2.5	2	0	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
DUF59	PF01883.14	gi|557693496|ref|YP_008796550.1|	-	0.0039	17.1	0.1	6	6.9	0.1	3.1	2	0	0	2	2	2	2	Domain	of	unknown	function	DUF59
Hydrolase_6	PF13344.1	gi|557693496|ref|YP_008796550.1|	-	0.0088	15.9	0.0	0.1	12.4	0.0	2.8	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
DUF997	PF06196.7	gi|557693496|ref|YP_008796550.1|	-	0.019	14.4	0.2	0.019	14.4	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF997)
LolB	PF03550.9	gi|557693496|ref|YP_008796550.1|	-	0.14	11.7	0.0	0.27	10.8	0.0	1.4	1	0	0	1	1	1	0	Outer	membrane	lipoprotein	LolB
Fer2_BFD	PF04324.10	gi|557693496|ref|YP_008796550.1|	-	0.25	11.4	3.8	2.1	8.4	0.2	3.4	3	0	0	3	3	3	0	BFD-like	[2Fe-2S]	binding	domain
YHS	PF04945.8	gi|557693497|ref|YP_008796551.1|	-	5.1e-19	67.8	1.0	6.1e-19	67.5	0.7	1.0	1	0	0	1	1	1	1	YHS	domain
Ribosomal_L24e	PF01246.15	gi|557693497|ref|YP_008796551.1|	-	0.00033	20.4	0.3	0.00038	20.2	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L24e
Arc_trans_TRASH	PF08394.5	gi|557693497|ref|YP_008796551.1|	-	0.002	18.2	0.2	0.0032	17.5	0.1	1.4	1	1	0	1	1	1	1	Archaeal	TRASH	domain
ATPase-cat_bd	PF12156.3	gi|557693497|ref|YP_008796551.1|	-	0.062	13.8	0.2	0.072	13.6	0.1	1.1	1	0	0	1	1	1	0	Putative	metal-binding	domain	of	cation	transport	ATPase
zf-FCS	PF06467.9	gi|557693497|ref|YP_008796551.1|	-	0.098	12.3	1.2	0.15	11.7	0.6	1.5	1	1	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF2116	PF09889.4	gi|557693497|ref|YP_008796551.1|	-	0.32	10.8	3.2	0.3	10.8	0.7	2.0	2	1	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
RHH_1	PF01402.16	gi|557693498|ref|YP_008796552.1|	-	1.8e-06	27.5	2.3	1.8e-06	27.5	1.6	2.2	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
CcdA	PF07362.7	gi|557693498|ref|YP_008796552.1|	-	0.00041	20.1	1.2	0.00066	19.5	0.6	1.5	1	1	1	2	2	2	1	Post-segregation	antitoxin	CcdA
GvpK	PF05121.7	gi|557693498|ref|YP_008796552.1|	-	0.014	15.1	4.9	0.017	14.9	3.4	1.1	1	0	0	1	1	1	0	Gas	vesicle	protein	K
ALMT	PF11744.3	gi|557693498|ref|YP_008796552.1|	-	0.018	13.7	0.2	0.02	13.5	0.1	1.0	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
RHH_3	PF12651.2	gi|557693498|ref|YP_008796552.1|	-	0.022	14.4	0.5	0.022	14.4	0.3	1.8	1	1	1	2	2	2	0	Ribbon-helix-helix	domain
TelA	PF05816.6	gi|557693498|ref|YP_008796552.1|	-	0.028	13.1	0.2	0.03	13.0	0.1	1.2	1	0	0	1	1	1	0	Toxic	anion	resistance	protein	(TelA)
DegS	PF05384.6	gi|557693498|ref|YP_008796552.1|	-	0.053	12.7	2.9	0.062	12.5	2.0	1.1	1	0	0	1	1	1	0	Sensor	protein	DegS
PMC2NT	PF08066.7	gi|557693498|ref|YP_008796552.1|	-	0.062	13.6	0.0	0.095	13.0	0.0	1.2	1	0	0	1	1	1	0	PMC2NT	(NUC016)	domain
DUF3619	PF12279.3	gi|557693498|ref|YP_008796552.1|	-	0.087	12.9	0.8	0.093	12.8	0.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3619)
Enkurin	PF13864.1	gi|557693498|ref|YP_008796552.1|	-	0.088	13.0	1.9	0.13	12.4	1.3	1.3	1	0	0	1	1	1	0	Calmodulin-binding
Prefoldin	PF02996.12	gi|557693498|ref|YP_008796552.1|	-	0.1	12.2	1.4	0.49	10.0	0.3	1.9	1	1	1	2	2	2	0	Prefoldin	subunit
CAP18_C	PF12153.3	gi|557693498|ref|YP_008796552.1|	-	0.14	11.8	0.5	0.14	11.8	0.4	2.1	2	0	0	2	2	2	0	LPS	binding	domain	of	CAP18	(C	terminal)
BAG	PF02179.11	gi|557693498|ref|YP_008796552.1|	-	0.36	10.9	7.2	3.2	7.9	5.0	2.0	1	1	0	1	1	1	0	BAG	domain
G-gamma	PF00631.17	gi|557693498|ref|YP_008796552.1|	-	2.2	8.0	5.7	0.47	10.2	0.3	2.1	1	1	1	2	2	2	0	GGL	domain
CRF	PF00473.12	gi|557693498|ref|YP_008796552.1|	-	3.6	7.7	10.6	0.53	10.4	4.0	1.9	2	0	0	2	2	2	0	Corticotropin-releasing	factor	family
Nitrate_red_del	PF02613.10	gi|557693499|ref|YP_008796553.1|	-	0.00018	21.3	0.0	0.0003	20.6	0.0	1.3	1	0	0	1	1	1	1	Nitrate	reductase	delta	subunit
Molybdopterin	PF00384.17	gi|557693500|ref|YP_008796554.1|	-	2.8e-24	85.6	0.0	1.6e-19	69.9	0.0	2.8	2	1	0	2	2	2	2	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|557693500|ref|YP_008796554.1|	-	2.1e-11	43.5	0.0	5.5e-11	42.2	0.0	1.7	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|557693500|ref|YP_008796554.1|	-	2.1e-07	30.6	1.7	9.8e-06	25.2	1.2	2.4	1	1	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
NrfD	PF03916.9	gi|557693501|ref|YP_008796555.1|	-	4.2e-44	151.2	22.8	4.2e-44	151.2	15.8	1.3	2	0	0	2	2	2	1	Polysulphide	reductase,	NrfD
DUF3464	PF11947.3	gi|557693501|ref|YP_008796555.1|	-	0.067	12.6	6.3	0.019	14.4	2.2	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3464)
Fer4_11	PF13247.1	gi|557693502|ref|YP_008796556.1|	-	1.8e-29	101.5	9.5	1.8e-29	101.5	6.6	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|557693502|ref|YP_008796556.1|	-	1.1e-17	64.1	30.5	1.7e-09	37.9	7.2	3.2	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|557693502|ref|YP_008796556.1|	-	4.6e-15	55.6	28.1	8.2e-10	38.8	7.3	2.7	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|557693502|ref|YP_008796556.1|	-	4.2e-13	48.8	48.2	1.5e-07	31.0	6.3	3.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|557693502|ref|YP_008796556.1|	-	8.7e-13	47.3	37.6	2e-05	24.2	1.4	4.9	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|557693502|ref|YP_008796556.1|	-	1.5e-12	46.7	45.2	4.2e-05	23.2	2.4	5.3	5	1	0	5	5	5	4	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|557693502|ref|YP_008796556.1|	-	2.5e-12	45.8	44.7	6.3e-07	28.7	2.7	6.0	5	1	0	5	5	5	4	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|557693502|ref|YP_008796556.1|	-	3.7e-11	42.7	49.4	0.00018	21.8	2.0	4.6	5	0	0	5	5	4	3	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|557693502|ref|YP_008796556.1|	-	2.4e-06	27.7	21.8	0.26	11.6	0.4	4.5	3	1	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|557693502|ref|YP_008796556.1|	-	2.5e-06	27.3	27.6	0.011	15.7	7.3	3.3	2	2	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|557693502|ref|YP_008796556.1|	-	8.4e-06	26.1	22.0	0.0059	17.0	1.4	4.3	4	0	0	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|557693502|ref|YP_008796556.1|	-	1.6e-05	25.5	23.7	0.42	11.3	2.9	4.5	4	1	0	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|557693502|ref|YP_008796556.1|	-	0.00023	20.9	28.3	0.0086	15.9	5.6	3.6	2	2	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|557693502|ref|YP_008796556.1|	-	0.0015	18.7	39.8	0.015	15.5	2.2	4.7	5	1	0	5	5	4	3	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|557693502|ref|YP_008796556.1|	-	1.1	9.8	28.4	2.9	8.5	7.9	4.2	3	1	1	4	4	4	0	4Fe-4S	single	cluster	domain
Fer4_20	PF14691.1	gi|557693502|ref|YP_008796556.1|	-	5.7	6.5	23.4	1.8	8.2	2.5	4.1	2	1	2	4	4	4	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Ribosom_S12_S23	PF00164.20	gi|557693503|ref|YP_008796557.1|	-	1.6e-36	124.4	0.2	1.7e-36	124.3	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
Mob_synth_C	PF06463.8	gi|557693504|ref|YP_008796558.1|	-	1.2e-32	112.2	0.0	1.8e-32	111.7	0.0	1.3	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Radical_SAM	PF04055.16	gi|557693504|ref|YP_008796558.1|	-	2.1e-28	99.5	0.2	3.9e-28	98.7	0.1	1.5	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|557693504|ref|YP_008796558.1|	-	2.4e-07	30.8	0.0	4.7e-07	29.8	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|557693504|ref|YP_008796558.1|	-	3.8e-07	30.2	0.0	7.2e-07	29.4	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
BATS	PF06968.8	gi|557693504|ref|YP_008796558.1|	-	0.067	13.0	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	Biotin	and	Thiamin	Synthesis	associated	domain
Cytochrom_B_N_2	PF13631.1	gi|557693505|ref|YP_008796559.1|	-	5.4e-26	91.3	10.0	5.4e-26	91.3	6.9	3.5	4	1	0	4	4	4	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|557693505|ref|YP_008796559.1|	-	8.1e-06	26.0	4.2	8.1e-06	26.0	2.9	3.4	4	1	1	5	5	5	1	Cytochrome	b(C-terminal)/b6/petD
DUF4405	PF14358.1	gi|557693505|ref|YP_008796559.1|	-	0.0012	18.8	1.1	0.0012	18.8	0.8	4.7	6	1	0	6	6	6	1	Domain	of	unknown	function	(DUF4405)
OTCace_N	PF02729.16	gi|557693506|ref|YP_008796560.1|	-	8.2e-41	138.9	0.0	1.3e-40	138.3	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|557693506|ref|YP_008796560.1|	-	2.3e-34	118.5	0.0	9.8e-33	113.2	0.0	2.1	2	0	0	2	2	2	2	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
TPP_enzyme_C	PF02775.16	gi|557693508|ref|YP_008796562.1|	-	8.8e-19	67.5	0.0	1.3e-18	67.0	0.0	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.14	gi|557693509|ref|YP_008796563.1|	-	5.5e-57	192.9	0.0	7e-57	192.5	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|557693509|ref|YP_008796563.1|	-	0.06	13.2	0.0	0.12	12.3	0.0	1.5	1	0	0	1	1	1	0	Transketolase,	C-terminal	domain
POR	PF01558.13	gi|557693510|ref|YP_008796564.1|	-	2.8e-28	98.9	0.0	3.7e-28	98.5	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4	PF00037.22	gi|557693510|ref|YP_008796564.1|	-	5.7e-12	44.7	16.4	6.8e-06	25.4	3.3	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|557693510|ref|YP_008796564.1|	-	5.1e-09	35.5	14.5	0.00013	21.7	2.5	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|557693510|ref|YP_008796564.1|	-	2.4e-08	33.7	9.6	4.2e-08	32.9	6.7	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|557693510|ref|YP_008796564.1|	-	1.5e-07	31.6	10.9	3e-07	30.6	7.5	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|557693510|ref|YP_008796564.1|	-	7.1e-07	28.9	10.1	1.5e-06	27.8	7.1	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|557693510|ref|YP_008796564.1|	-	1.9e-06	27.5	15.6	0.0017	18.1	2.4	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|557693510|ref|YP_008796564.1|	-	2.2e-06	28.3	8.0	0.0037	17.9	0.7	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.1	gi|557693510|ref|YP_008796564.1|	-	0.00017	21.7	11.2	0.00029	21.0	7.8	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|557693510|ref|YP_008796564.1|	-	0.0039	17.4	4.3	0.52	10.7	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|557693510|ref|YP_008796564.1|	-	0.027	14.7	13.1	0.054	13.8	2.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|557693510|ref|YP_008796564.1|	-	0.059	13.4	11.0	0.4	10.7	7.8	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|557693510|ref|YP_008796564.1|	-	0.11	13.0	12.3	1.3	9.6	1.4	2.7	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|557693510|ref|YP_008796564.1|	-	2.5	8.5	10.4	1.6	9.1	0.9	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|557693510|ref|YP_008796564.1|	-	7.2	7.1	14.2	1.5	9.2	1.8	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
ATP-grasp_5	PF13549.1	gi|557693511|ref|YP_008796565.1|	-	2.4e-49	167.5	0.0	4.3e-49	166.7	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.1	gi|557693511|ref|YP_008796565.1|	-	2.4e-42	143.7	1.4	2.4e-42	143.7	1.0	2.0	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|557693511|ref|YP_008796565.1|	-	3.1e-19	69.2	1.1	7.4e-18	64.8	0.3	2.9	3	0	0	3	3	3	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|557693511|ref|YP_008796565.1|	-	6.8e-11	42.5	0.3	7.8e-08	32.7	0.1	3.2	3	0	0	3	3	3	2	CoA	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|557693511|ref|YP_008796565.1|	-	0.045	13.4	0.0	0.12	12.0	0.0	1.7	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_10	PF13460.1	gi|557693511|ref|YP_008796565.1|	-	0.08	12.9	1.5	0.29	11.1	1.1	2.0	1	0	0	1	1	1	0	NADH(P)-binding
DUF350	PF03994.9	gi|557693512|ref|YP_008796566.1|	-	1.1e-05	25.0	12.6	0.00014	21.5	0.8	3.3	2	1	0	2	2	2	2	Domain	of	Unknown	Function	(DUF350)
VPEP	PF07589.6	gi|557693513|ref|YP_008796567.1|	-	0.14	12.0	0.4	0.14	12.0	0.2	5.0	5	0	0	5	5	5	0	PEP-CTERM	motif
DUF4179	PF13786.1	gi|557693514|ref|YP_008796568.1|	-	0.0003	20.9	0.0	0.00083	19.5	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4179)
DZR	PF12773.2	gi|557693514|ref|YP_008796568.1|	-	0.042	13.6	0.9	0.073	12.9	0.6	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
TOBE_2	PF08402.5	gi|557693514|ref|YP_008796568.1|	-	0.089	12.7	2.8	6.2	6.8	0.0	2.5	2	0	0	2	2	2	0	TOBE	domain
ETRAMP	PF09716.5	gi|557693514|ref|YP_008796568.1|	-	0.2	11.6	0.3	0.42	10.5	0.0	1.7	2	0	0	2	2	2	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
zf-ribbon_3	PF13248.1	gi|557693514|ref|YP_008796568.1|	-	0.41	9.9	2.6	0.74	9.1	1.8	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-HIT	PF04438.11	gi|557693514|ref|YP_008796568.1|	-	0.99	9.1	3.9	1.5	8.5	2.7	1.3	1	0	0	1	1	1	0	HIT	zinc	finger
SKG6	PF08693.5	gi|557693514|ref|YP_008796568.1|	-	2.6	7.4	11.5	0.19	11.0	2.1	2.7	2	0	0	2	2	2	0	Transmembrane	alpha-helix	domain
Peptidase_M6	PF05547.6	gi|557693515|ref|YP_008796569.1|	-	0.014	13.4	5.9	0.61	8.0	0.5	2.8	2	1	1	3	3	3	0	Immune	inhibitor	A	peptidase	M6
Gram_pos_anchor	PF00746.16	gi|557693515|ref|YP_008796569.1|	-	3.8	7.4	5.1	0.44	10.4	0.1	2.0	2	0	0	2	2	2	0	Gram	positive	anchor
RimK	PF08443.6	gi|557693516|ref|YP_008796570.1|	-	3e-44	150.7	0.0	3.9e-44	150.4	0.0	1.1	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|557693516|ref|YP_008796570.1|	-	9.8e-13	48.2	0.0	1.4e-12	47.7	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|557693516|ref|YP_008796570.1|	-	1e-09	37.7	0.0	1.6e-09	37.1	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|557693516|ref|YP_008796570.1|	-	7.3e-09	34.8	0.0	1.1e-08	34.2	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|557693516|ref|YP_008796570.1|	-	4.8e-05	23.2	0.0	7.9e-05	22.5	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
DUF4343	PF14243.1	gi|557693516|ref|YP_008796570.1|	-	0.011	15.5	0.1	0.061	13.1	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4343)
ATP-grasp	PF02222.17	gi|557693516|ref|YP_008796570.1|	-	0.012	14.9	0.0	0.021	14.1	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|557693516|ref|YP_008796570.1|	-	0.012	14.9	0.0	0.027	13.8	0.0	1.6	2	0	0	2	2	2	0	D-ala	D-ala	ligase	C-terminus
Peptidase_M54	PF07998.6	gi|557693517|ref|YP_008796571.1|	-	5.4e-25	88.2	0.0	7.4e-25	87.8	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M54
Peptidase_M66	PF10462.4	gi|557693517|ref|YP_008796571.1|	-	0.00038	19.4	0.0	0.00054	18.9	0.0	1.2	1	0	0	1	1	1	1	Peptidase	M66
Peptidase_M10	PF00413.19	gi|557693517|ref|YP_008796571.1|	-	0.00066	19.4	0.2	0.00076	19.2	0.1	1.3	1	1	0	1	1	1	1	Matrixin
Metallopep	PF12044.3	gi|557693517|ref|YP_008796571.1|	-	0.065	11.6	0.3	0.11	10.9	0.2	1.3	1	0	0	1	1	1	0	Putative	peptidase	family
AAA_18	PF13238.1	gi|557693518|ref|YP_008796572.1|	-	2.9e-17	63.1	0.1	9.6e-17	61.5	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|557693518|ref|YP_008796572.1|	-	1.2e-10	42.3	0.1	3.4e-10	40.7	0.0	1.8	1	1	1	2	2	2	1	AAA	domain
SKI	PF01202.17	gi|557693518|ref|YP_008796572.1|	-	4.9e-08	32.9	0.3	3.5e-07	30.2	0.2	2.1	1	1	0	1	1	1	1	Shikimate	kinase
AAA	PF00004.24	gi|557693518|ref|YP_008796572.1|	-	2e-06	28.0	0.3	3.8e-05	23.9	0.2	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|557693518|ref|YP_008796572.1|	-	8.2e-05	22.5	1.0	0.0053	16.6	0.1	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_28	PF13521.1	gi|557693518|ref|YP_008796572.1|	-	0.00068	19.6	0.1	0.0013	18.6	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|557693518|ref|YP_008796572.1|	-	0.00085	19.4	0.1	0.001	19.2	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
Cytidylate_kin2	PF13189.1	gi|557693518|ref|YP_008796572.1|	-	0.0011	18.9	0.1	0.0033	17.3	0.0	1.8	2	0	0	2	2	2	1	Cytidylate	kinase-like	family
MobB	PF03205.9	gi|557693518|ref|YP_008796572.1|	-	0.0036	17.0	1.0	0.077	12.6	0.3	2.1	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PRK	PF00485.13	gi|557693518|ref|YP_008796572.1|	-	0.0078	15.7	0.1	1.6	8.2	0.0	3.0	3	0	0	3	3	3	1	Phosphoribulokinase	/	Uridine	kinase	family
RNA_helicase	PF00910.17	gi|557693518|ref|YP_008796572.1|	-	0.014	15.5	0.0	0.026	14.7	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
AAA_10	PF12846.2	gi|557693518|ref|YP_008796572.1|	-	0.039	13.3	0.0	0.074	12.4	0.0	1.4	1	1	0	1	1	1	0	AAA-like	domain
Viral_helicase1	PF01443.13	gi|557693518|ref|YP_008796572.1|	-	0.061	12.8	0.0	0.099	12.1	0.0	1.3	1	1	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
cwf21	PF08312.7	gi|557693518|ref|YP_008796572.1|	-	0.09	12.6	0.3	0.2	11.5	0.2	1.6	1	0	0	1	1	1	0	cwf21	domain
AAA_24	PF13479.1	gi|557693518|ref|YP_008796572.1|	-	0.12	11.9	0.4	0.22	11.0	0.3	1.4	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|557693518|ref|YP_008796572.1|	-	0.13	11.9	0.0	0.31	10.6	0.0	1.7	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_16	PF13191.1	gi|557693518|ref|YP_008796572.1|	-	0.15	12.0	2.9	2.2	8.2	2.0	2.3	1	1	0	1	1	1	0	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|557693518|ref|YP_008796572.1|	-	0.35	10.5	4.7	0.19	11.4	0.5	2.2	2	1	0	2	2	2	0	NTPase
ABC_tran	PF00005.22	gi|557693519|ref|YP_008796573.1|	-	1.5e-42	145.1	0.0	3.4e-21	75.9	0.0	2.6	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|557693519|ref|YP_008796573.1|	-	3.2e-15	56.8	3.8	6.1e-07	29.6	0.6	4.2	2	2	1	3	3	3	2	AAA	domain
SMC_N	PF02463.14	gi|557693519|ref|YP_008796573.1|	-	4.9e-11	42.2	2.0	0.0037	16.5	0.0	4.1	4	0	0	4	4	4	2	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|557693519|ref|YP_008796573.1|	-	8.2e-08	31.8	1.5	3.1e-05	23.4	0.0	3.2	3	1	0	3	3	3	1	AAA	domain
Fer4	PF00037.22	gi|557693519|ref|YP_008796573.1|	-	2.6e-07	29.9	3.5	2.6e-07	29.9	2.4	2.3	3	0	0	3	3	1	1	4Fe-4S	binding	domain
RLI	PF04068.10	gi|557693519|ref|YP_008796573.1|	-	6.3e-07	28.8	1.9	1.5e-06	27.6	1.4	1.7	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
Fer4_6	PF12837.2	gi|557693519|ref|YP_008796573.1|	-	1.8e-06	27.5	12.1	0.0002	21.0	1.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
AAA_33	PF13671.1	gi|557693519|ref|YP_008796573.1|	-	3e-06	27.1	0.5	0.11	12.3	0.0	3.9	2	2	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|557693519|ref|YP_008796573.1|	-	5.7e-06	25.6	0.0	0.15	11.0	0.0	3.9	4	0	0	4	4	4	1	AAA	ATPase	domain
Fer4_10	PF13237.1	gi|557693519|ref|YP_008796573.1|	-	2.8e-05	23.8	9.6	5.5e-05	22.8	6.7	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_22	PF13401.1	gi|557693519|ref|YP_008796573.1|	-	8.3e-05	22.7	0.5	0.11	12.6	0.0	3.1	2	1	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|557693519|ref|YP_008796573.1|	-	0.00023	20.6	0.1	0.13	11.8	0.0	2.4	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|557693519|ref|YP_008796573.1|	-	0.00028	21.0	0.0	0.41	10.8	0.0	2.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.1	gi|557693519|ref|YP_008796573.1|	-	0.00057	20.2	0.2	0.33	11.2	0.1	2.6	2	0	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.17	gi|557693519|ref|YP_008796573.1|	-	0.00072	18.5	0.0	0.13	11.0	0.0	2.4	2	0	0	2	2	2	1	NB-ARC	domain
SbcCD_C	PF13558.1	gi|557693519|ref|YP_008796573.1|	-	0.00072	19.4	0.1	1.8	8.5	0.0	3.5	2	2	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_17	PF13207.1	gi|557693519|ref|YP_008796573.1|	-	0.0012	19.6	3.0	0.27	12.0	0.2	3.2	3	1	0	3	3	2	1	AAA	domain
Fer4_7	PF12838.2	gi|557693519|ref|YP_008796573.1|	-	0.0012	19.1	9.7	0.0023	18.2	1.0	2.3	1	1	0	2	2	2	1	4Fe-4S	dicluster	domain
RNA_helicase	PF00910.17	gi|557693519|ref|YP_008796573.1|	-	0.0016	18.5	0.0	2	8.6	0.0	2.5	2	0	0	2	2	2	1	RNA	helicase
DUF258	PF03193.11	gi|557693519|ref|YP_008796573.1|	-	0.002	17.3	0.0	0.66	9.1	0.0	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
Fer4_16	PF13484.1	gi|557693519|ref|YP_008796573.1|	-	0.0035	18.0	0.1	0.0035	18.0	0.1	2.3	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|557693519|ref|YP_008796573.1|	-	0.0038	17.0	12.4	0.0082	16.0	1.7	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_16	PF13191.1	gi|557693519|ref|YP_008796573.1|	-	0.004	17.1	0.4	0.54	10.2	0.0	2.6	2	1	0	2	2	2	1	AAA	ATPase	domain
NACHT	PF05729.7	gi|557693519|ref|YP_008796573.1|	-	0.005	16.5	2.7	0.75	9.4	0.0	2.4	2	0	0	2	2	2	1	NACHT	domain
Fer4_21	PF14697.1	gi|557693519|ref|YP_008796573.1|	-	0.0057	16.4	7.0	0.0099	15.7	4.8	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|557693519|ref|YP_008796573.1|	-	0.0081	16.0	2.0	0.015	15.1	1.4	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
MobB	PF03205.9	gi|557693519|ref|YP_008796573.1|	-	0.0091	15.7	1.4	1	9.0	0.1	2.6	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
IstB_IS21	PF01695.12	gi|557693519|ref|YP_008796573.1|	-	0.019	14.4	0.4	0.11	11.8	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
RuvB_N	PF05496.7	gi|557693519|ref|YP_008796573.1|	-	0.024	13.6	0.2	0.39	9.7	0.0	2.6	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
Fer4_9	PF13187.1	gi|557693519|ref|YP_008796573.1|	-	0.024	14.8	8.7	0.082	13.1	6.0	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Miro	PF08477.8	gi|557693519|ref|YP_008796573.1|	-	0.025	15.0	0.0	12	6.4	0.0	2.8	2	0	0	2	2	2	0	Miro-like	protein
AAA_18	PF13238.1	gi|557693519|ref|YP_008796573.1|	-	0.027	14.7	0.4	9.9	6.4	0.0	3.3	3	1	0	3	3	3	0	AAA	domain
AAA_14	PF13173.1	gi|557693519|ref|YP_008796573.1|	-	0.032	14.1	0.4	5.1	7.0	0.0	3.2	4	0	0	4	4	3	0	AAA	domain
VirE	PF05272.6	gi|557693519|ref|YP_008796573.1|	-	0.043	13.2	0.0	1.8	7.9	0.0	2.3	2	0	0	2	2	2	0	Virulence-associated	protein	E
ArgK	PF03308.11	gi|557693519|ref|YP_008796573.1|	-	0.048	12.4	0.4	1.4	7.5	0.0	2.2	2	0	0	2	2	2	0	ArgK	protein
Fer4_8	PF13183.1	gi|557693519|ref|YP_008796573.1|	-	0.17	11.9	5.1	0.51	10.3	3.6	1.6	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
AAA_10	PF12846.2	gi|557693519|ref|YP_008796573.1|	-	0.18	11.1	1.9	18	4.6	0.2	2.9	4	0	0	4	4	3	0	AAA-like	domain
Fer4_15	PF13459.1	gi|557693519|ref|YP_008796573.1|	-	0.19	12.3	7.0	0.75	10.4	0.9	2.9	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
AAA_13	PF13166.1	gi|557693519|ref|YP_008796573.1|	-	0.27	9.6	0.0	0.97	7.8	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|557693519|ref|YP_008796573.1|	-	0.29	10.6	3.1	3.4	7.1	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|557693519|ref|YP_008796573.1|	-	0.47	9.8	3.3	2.8	7.3	0.1	2.3	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.10	gi|557693519|ref|YP_008796573.1|	-	0.71	9.5	4.7	11	5.7	0.1	3.4	4	0	0	4	4	3	0	NTPase
Fer4_4	PF12800.2	gi|557693519|ref|YP_008796573.1|	-	0.84	10.1	11.2	0.24	11.8	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|557693519|ref|YP_008796573.1|	-	1.7	9.0	6.2	0.43	10.9	1.2	1.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|557693519|ref|YP_008796573.1|	-	2.8	8.7	11.0	0.11	13.1	2.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
AAA	PF00004.24	gi|557693520|ref|YP_008796574.1|	-	2.6e-101	335.0	0.0	1e-49	168.0	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|557693520|ref|YP_008796574.1|	-	9.1e-30	102.4	0.1	4.4e-29	100.2	0.1	2.2	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_16	PF13191.1	gi|557693520|ref|YP_008796574.1|	-	6.5e-16	58.8	0.7	2.5e-06	27.6	0.0	3.5	3	1	0	3	3	3	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557693520|ref|YP_008796574.1|	-	1.1e-14	54.7	0.4	9.1e-06	25.8	0.0	4.2	2	2	1	3	3	3	2	AAA	domain
AAA_2	PF07724.9	gi|557693520|ref|YP_008796574.1|	-	1.7e-14	54.0	0.0	9.3e-07	28.9	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
CDC48_2	PF02933.12	gi|557693520|ref|YP_008796574.1|	-	4.9e-14	51.7	0.5	1.7e-13	49.9	0.4	2.0	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
RuvB_N	PF05496.7	gi|557693520|ref|YP_008796574.1|	-	5.8e-14	51.6	0.0	1.1e-06	27.9	0.0	2.7	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_17	PF13207.1	gi|557693520|ref|YP_008796574.1|	-	2.8e-13	50.7	0.0	8.3e-07	29.8	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|557693520|ref|YP_008796574.1|	-	6.2e-12	44.9	0.0	9.7e-05	21.2	0.0	2.7	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_5	PF07728.9	gi|557693520|ref|YP_008796574.1|	-	5.9e-11	42.2	0.2	0.00019	21.1	0.0	3.7	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_14	PF13173.1	gi|557693520|ref|YP_008796574.1|	-	1.8e-10	40.8	0.0	7e-05	22.7	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_33	PF13671.1	gi|557693520|ref|YP_008796574.1|	-	3.5e-10	39.9	0.0	0.00024	20.9	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Zeta_toxin	PF06414.7	gi|557693520|ref|YP_008796574.1|	-	4.2e-10	39.0	0.0	6.5e-05	22.1	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|557693520|ref|YP_008796574.1|	-	4.4e-09	36.0	0.2	0.0031	16.9	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|557693520|ref|YP_008796574.1|	-	1.3e-08	34.5	3.5	0.0021	17.7	0.1	3.2	3	0	0	3	3	2	2	Part	of	AAA	domain
AAA_18	PF13238.1	gi|557693520|ref|YP_008796574.1|	-	5.5e-08	33.1	0.1	0.0047	17.2	0.0	2.8	3	0	0	3	3	2	2	AAA	domain
AAA_28	PF13521.1	gi|557693520|ref|YP_008796574.1|	-	1.2e-07	31.8	0.1	0.01	15.8	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
RNA_helicase	PF00910.17	gi|557693520|ref|YP_008796574.1|	-	1.6e-07	31.4	0.0	0.016	15.4	0.0	2.5	2	0	0	2	2	2	2	RNA	helicase
Mg_chelatase	PF01078.16	gi|557693520|ref|YP_008796574.1|	-	5.2e-07	29.0	0.1	0.022	13.9	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_25	PF13481.1	gi|557693520|ref|YP_008796574.1|	-	5.5e-07	29.1	6.1	0.09	12.1	0.2	4.5	2	2	2	4	4	4	2	AAA	domain
Arch_ATPase	PF01637.13	gi|557693520|ref|YP_008796574.1|	-	2.9e-06	27.1	0.1	0.088	12.4	0.0	3.7	2	2	1	3	3	3	2	Archaeal	ATPase
NACHT	PF05729.7	gi|557693520|ref|YP_008796574.1|	-	4.2e-06	26.5	0.1	0.66	9.6	0.0	3.8	4	0	0	4	4	4	2	NACHT	domain
Sigma54_activat	PF00158.21	gi|557693520|ref|YP_008796574.1|	-	6.4e-06	25.7	0.0	0.089	12.2	0.0	2.7	2	1	0	2	2	2	2	Sigma-54	interaction	domain
Parvo_NS1	PF01057.12	gi|557693520|ref|YP_008796574.1|	-	7.1e-06	25.0	0.1	0.032	13.1	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
ABC_tran	PF00005.22	gi|557693520|ref|YP_008796574.1|	-	1e-05	25.8	0.0	0.094	13.0	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_24	PF13479.1	gi|557693520|ref|YP_008796574.1|	-	1.1e-05	25.1	1.4	0.068	12.7	0.1	2.4	2	0	0	2	2	2	2	AAA	domain
DUF815	PF05673.8	gi|557693520|ref|YP_008796574.1|	-	1.3e-05	24.2	0.0	0.042	12.7	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
KaiC	PF06745.8	gi|557693520|ref|YP_008796574.1|	-	1.9e-05	23.9	0.3	0.081	12.0	0.0	3.3	3	1	1	4	4	3	2	KaiC
DUF2075	PF09848.4	gi|557693520|ref|YP_008796574.1|	-	2.2e-05	23.5	0.0	0.077	11.9	0.0	2.2	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
PhoH	PF02562.11	gi|557693520|ref|YP_008796574.1|	-	2.6e-05	23.5	0.2	0.16	11.1	0.0	2.5	2	0	0	2	2	2	2	PhoH-like	protein
Sigma54_activ_2	PF14532.1	gi|557693520|ref|YP_008796574.1|	-	4e-05	23.6	0.0	0.32	11.0	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
NB-ARC	PF00931.17	gi|557693520|ref|YP_008796574.1|	-	7.9e-05	21.6	0.0	0.15	10.8	0.0	2.4	2	0	0	2	2	2	2	NB-ARC	domain
AAA_3	PF07726.6	gi|557693520|ref|YP_008796574.1|	-	0.0001	21.9	0.0	0.53	9.8	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|557693520|ref|YP_008796574.1|	-	0.0003	20.5	1.8	1.7	8.2	0.0	4.0	3	1	1	4	4	4	2	NTPase
SKI	PF01202.17	gi|557693520|ref|YP_008796574.1|	-	0.00033	20.5	0.0	0.56	10.0	0.0	2.5	2	0	0	2	2	2	2	Shikimate	kinase
AAA_11	PF13086.1	gi|557693520|ref|YP_008796574.1|	-	0.00052	19.6	0.0	0.68	9.4	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_30	PF13604.1	gi|557693520|ref|YP_008796574.1|	-	0.0011	18.6	0.1	1.8	8.1	0.0	2.8	3	0	0	3	3	2	1	AAA	domain
Cytidylate_kin2	PF13189.1	gi|557693520|ref|YP_008796574.1|	-	0.0017	18.2	0.0	0.11	12.3	0.0	2.4	2	0	0	2	2	2	1	Cytidylate	kinase-like	family
UPF0079	PF02367.12	gi|557693520|ref|YP_008796574.1|	-	0.0018	17.8	0.0	1.4	8.6	0.0	2.5	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
AFG1_ATPase	PF03969.11	gi|557693520|ref|YP_008796574.1|	-	0.0024	16.7	0.0	4.9	5.8	0.0	3.3	3	0	0	3	3	3	0	AFG1-like	ATPase
ResIII	PF04851.10	gi|557693520|ref|YP_008796574.1|	-	0.0028	17.4	0.0	1.6	8.5	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
IPT	PF01745.11	gi|557693520|ref|YP_008796574.1|	-	0.004	16.3	0.1	0.75	8.9	0.0	2.5	2	0	0	2	2	2	1	Isopentenyl	transferase
Vps4_C	PF09336.5	gi|557693520|ref|YP_008796574.1|	-	0.004	16.9	0.0	5	7.1	0.0	2.7	2	0	0	2	2	2	0	Vps4	C	terminal	oligomerisation	domain
ATP-synt_ab	PF00006.20	gi|557693520|ref|YP_008796574.1|	-	0.0045	16.5	0.0	1.6	8.1	0.0	2.4	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Bac_DnaA	PF00308.13	gi|557693520|ref|YP_008796574.1|	-	0.0066	16.1	0.0	4.8	6.7	0.0	2.7	2	1	0	2	2	2	0	Bacterial	dnaA	protein
Guanylate_kin	PF00625.16	gi|557693520|ref|YP_008796574.1|	-	0.0085	15.5	0.8	9.5	5.6	0.0	4.0	3	2	2	5	5	3	0	Guanylate	kinase
KAP_NTPase	PF07693.9	gi|557693520|ref|YP_008796574.1|	-	0.019	14.0	0.1	7.6	5.4	0.0	3.4	2	2	1	3	3	3	0	KAP	family	P-loop	domain
AAA_23	PF13476.1	gi|557693520|ref|YP_008796574.1|	-	0.022	15.0	0.1	3.4	7.9	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|557693520|ref|YP_008796574.1|	-	0.025	13.4	0.0	5.1	5.9	0.0	2.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
KTI12	PF08433.5	gi|557693520|ref|YP_008796574.1|	-	0.031	13.4	0.0	4.5	6.4	0.0	2.5	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
DAP3	PF10236.4	gi|557693520|ref|YP_008796574.1|	-	0.072	12.0	0.0	6.2	5.6	0.0	2.3	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_21	PF13304.1	gi|557693520|ref|YP_008796574.1|	-	0.12	12.2	1.5	13	5.6	0.1	3.1	2	1	0	3	3	3	0	AAA	domain
Viral_helicase1	PF01443.13	gi|557693520|ref|YP_008796574.1|	-	0.24	10.9	0.0	9.1	5.7	0.0	2.2	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
Snf7	PF03357.16	gi|557693521|ref|YP_008796575.1|	-	5.4e-09	35.6	2.8	6.6e-09	35.3	1.9	1.3	1	1	0	1	1	1	1	Snf7
LOH1CR12	PF10158.4	gi|557693521|ref|YP_008796575.1|	-	0.0052	16.5	3.3	0.013	15.2	1.1	2.1	1	1	1	2	2	2	1	Tumour	suppressor	protein
Peptidase_S49_N	PF08496.5	gi|557693521|ref|YP_008796575.1|	-	0.024	14.4	0.7	0.061	13.1	0.4	1.9	1	1	0	1	1	1	0	Peptidase	family	S49	N-terminal
Ax_dynein_light	PF10211.4	gi|557693521|ref|YP_008796575.1|	-	0.31	10.8	7.8	0.034	14.0	2.4	1.5	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
DUF972	PF06156.8	gi|557693521|ref|YP_008796575.1|	-	0.76	10.1	4.2	1.2	9.4	1.6	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
DivIVA	PF05103.8	gi|557693521|ref|YP_008796575.1|	-	0.97	9.4	7.9	2.2	8.3	2.7	2.7	1	1	1	2	2	2	0	DivIVA	protein
Peripla_BP_2	PF01497.13	gi|557693522|ref|YP_008796576.1|	-	2.9e-27	95.3	0.0	3.9e-27	94.9	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
BacA	PF02673.13	gi|557693523|ref|YP_008796577.1|	-	1.5e-44	152.1	15.2	1.8e-44	151.8	10.5	1.0	1	0	0	1	1	1	1	Bacitracin	resistance	protein	BacA
KH_1	PF00013.24	gi|557693524|ref|YP_008796578.1|	-	1e-16	60.2	5.7	2.9e-09	36.4	0.2	2.5	2	1	0	2	2	2	2	KH	domain
KH_3	PF13014.1	gi|557693524|ref|YP_008796578.1|	-	2.3e-08	33.4	1.4	0.0016	18.0	0.1	2.4	2	0	0	2	2	2	2	KH	domain
KH_2	PF07650.12	gi|557693524|ref|YP_008796578.1|	-	0.00097	18.6	1.0	0.11	12.0	0.0	2.3	2	0	0	2	2	2	2	KH	domain
BON	PF04972.12	gi|557693524|ref|YP_008796578.1|	-	0.023	14.4	4.2	0.18	11.5	0.4	2.5	2	0	0	2	2	2	0	BON	domain
KH_4	PF13083.1	gi|557693524|ref|YP_008796578.1|	-	0.29	10.7	2.4	7.3	6.3	0.1	2.7	2	2	0	2	2	2	0	KH	domain
RIO1	PF01163.17	gi|557693525|ref|YP_008796579.1|	-	2.1e-54	183.7	0.0	3.2e-54	183.1	0.0	1.2	1	0	0	1	1	1	1	RIO1	family
APH	PF01636.18	gi|557693525|ref|YP_008796579.1|	-	1e-09	38.4	2.2	3.4e-07	30.2	0.0	2.9	2	1	1	3	3	3	2	Phosphotransferase	enzyme	family
Pkinase	PF00069.20	gi|557693525|ref|YP_008796579.1|	-	1.3e-06	27.8	0.0	2.1e-06	27.0	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Kdo	PF06293.9	gi|557693525|ref|YP_008796579.1|	-	7.8e-05	21.8	0.0	0.0015	17.5	0.0	2.2	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase_Tyr	PF07714.12	gi|557693525|ref|YP_008796579.1|	-	0.054	12.5	0.0	0.091	11.8	0.0	1.5	1	1	0	1	1	1	0	Protein	tyrosine	kinase
Acylphosphatase	PF00708.13	gi|557693526|ref|YP_008796580.1|	-	6.3e-18	64.6	0.2	1.1e-17	63.8	0.2	1.4	1	0	0	1	1	1	1	Acylphosphatase
Halo_GVPC	PF05465.8	gi|557693526|ref|YP_008796580.1|	-	0.00012	21.8	2.4	0.00033	20.4	1.7	1.8	1	0	0	1	1	1	1	Halobacterial	gas	vesicle	protein	C	(GVPC)	repeat
Apolipoprotein	PF01442.13	gi|557693526|ref|YP_008796580.1|	-	0.0098	15.4	1.1	0.024	14.1	0.8	1.5	1	1	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
DUF4085	PF13315.1	gi|557693526|ref|YP_008796580.1|	-	0.042	13.2	0.6	0.16	11.3	0.5	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4085)
IncA	PF04156.9	gi|557693526|ref|YP_008796580.1|	-	0.046	13.3	1.3	0.08	12.5	0.9	1.4	1	0	0	1	1	1	0	IncA	protein
TPR_MLP1_2	PF07926.7	gi|557693526|ref|YP_008796580.1|	-	0.056	13.1	0.2	0.072	12.8	0.2	1.1	1	0	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
Type_III_YscX	PF09474.5	gi|557693526|ref|YP_008796580.1|	-	0.067	13.2	0.1	0.11	12.5	0.1	1.3	1	0	0	1	1	1	0	Type	III	secretion	system	YscX	(type_III_YscX)
TBPIP	PF07106.8	gi|557693526|ref|YP_008796580.1|	-	0.076	12.5	1.1	0.79	9.2	0.9	1.6	1	1	1	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF342	PF03961.8	gi|557693526|ref|YP_008796580.1|	-	0.12	10.7	0.4	0.16	10.3	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Sds3	PF08598.6	gi|557693526|ref|YP_008796580.1|	-	0.12	11.8	4.9	0.17	11.3	3.4	1.2	1	0	0	1	1	1	0	Sds3-like
SCO1-SenC	PF02630.9	gi|557693528|ref|YP_008796582.1|	-	4.7e-38	130.5	0.0	5.7e-38	130.2	0.0	1.1	1	0	0	1	1	1	1	SCO1/SenC
AhpC-TSA	PF00578.16	gi|557693528|ref|YP_008796582.1|	-	7.3e-12	45.0	0.0	1.1e-11	44.4	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|557693528|ref|YP_008796582.1|	-	5.8e-08	32.3	0.0	7.2e-08	32.0	0.0	1.2	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|557693528|ref|YP_008796582.1|	-	6.6e-06	26.1	0.0	1e-05	25.5	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
DUF3485	PF11984.3	gi|557693528|ref|YP_008796582.1|	-	0.019	14.0	0.0	1.4	7.9	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3485)
Ribonuc_red_lgC	PF02867.10	gi|557693529|ref|YP_008796583.1|	-	3e-159	531.0	0.0	6.7e-159	529.8	0.0	1.6	1	1	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.16	gi|557693529|ref|YP_008796583.1|	-	2.5e-23	81.6	0.1	8.9e-23	79.9	0.1	2.0	1	1	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.11	gi|557693529|ref|YP_008796583.1|	-	1.7e-18	66.8	1.3	5.4e-18	65.2	0.9	2.0	1	0	0	1	1	1	1	ATP	cone	domain
B12-binding_2	PF02607.12	gi|557693529|ref|YP_008796583.1|	-	0.017	15.1	0.4	0.083	12.9	0.2	2.2	1	1	1	2	2	2	0	B12	binding	domain
DUF2336	PF10098.4	gi|557693529|ref|YP_008796583.1|	-	0.039	13.1	2.5	0.067	12.4	1.8	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2336)
OsmC	PF02566.14	gi|557693530|ref|YP_008796584.1|	-	4.4e-19	68.5	0.4	5.8e-19	68.1	0.2	1.1	1	0	0	1	1	1	1	OsmC-like	protein
MORN	PF02493.15	gi|557693530|ref|YP_008796584.1|	-	0.046	13.4	0.2	0.092	12.5	0.2	1.4	1	0	0	1	1	1	0	MORN	repeat
DUF192	PF02643.10	gi|557693531|ref|YP_008796585.1|	-	2.9e-37	126.6	0.0	8.6e-37	125.1	0.0	1.6	2	0	0	2	2	2	1	Uncharacterized	ACR,	COG1430
Keratin_assoc	PF09775.4	gi|557693531|ref|YP_008796585.1|	-	0.082	12.4	0.3	0.12	11.9	0.2	1.2	1	0	0	1	1	1	0	Keratinocyte-associated	protein	2
UPF0051	PF01458.12	gi|557693532|ref|YP_008796586.1|	-	6.6e-72	241.6	0.1	8.6e-72	241.3	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
Ald_Xan_dh_C2	PF02738.13	gi|557693533|ref|YP_008796587.1|	-	1.3e-127	426.4	0.0	3.6e-127	424.9	0.0	1.6	2	0	0	2	2	2	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557693533|ref|YP_008796587.1|	-	1.3e-27	96.0	0.1	3.2e-27	94.7	0.1	1.7	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Sigma70_r3	PF04539.11	gi|557693533|ref|YP_008796587.1|	-	0.08	12.8	0.4	6.2	6.7	0.0	3.7	4	0	0	4	4	4	0	Sigma-70	region	3
Aminotran_5	PF00266.14	gi|557693534|ref|YP_008796588.1|	-	1.5e-43	149.0	0.0	1.9e-43	148.6	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|557693534|ref|YP_008796588.1|	-	3e-07	29.7	0.0	4.8e-07	29.0	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|557693534|ref|YP_008796588.1|	-	0.0011	18.2	0.0	0.0012	18.0	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|557693534|ref|YP_008796588.1|	-	0.0014	16.9	0.0	0.0023	16.2	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.12	gi|557693534|ref|YP_008796588.1|	-	0.024	13.6	0.4	0.048	12.6	0.3	1.4	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
SHMT	PF00464.14	gi|557693534|ref|YP_008796588.1|	-	0.051	11.9	0.0	1.1	7.5	0.0	2.1	2	0	0	2	2	2	0	Serine	hydroxymethyltransferase
MaoC_dehydratas	PF01575.14	gi|557693535|ref|YP_008796589.1|	-	2.7e-17	62.3	0.0	3.4e-17	61.9	0.0	1.1	1	0	0	1	1	1	1	MaoC	like	domain
MaoC_dehydrat_N	PF13452.1	gi|557693535|ref|YP_008796589.1|	-	1.8e-08	34.2	0.0	2.3e-08	33.9	0.0	1.1	1	0	0	1	1	1	1	N-terminal	half	of	MaoC	dehydratase
4HBT	PF03061.17	gi|557693535|ref|YP_008796589.1|	-	0.0026	17.8	0.0	0.0048	16.9	0.0	1.4	1	0	0	1	1	1	1	Thioesterase	superfamily
tRNA_SAD	PF07973.9	gi|557693536|ref|YP_008796590.1|	-	3.2e-09	36.5	0.2	6.1e-09	35.6	0.1	1.5	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2c	PF01411.14	gi|557693536|ref|YP_008796590.1|	-	1.1e-07	30.5	0.0	1.6e-07	30.0	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
MMR_HSR1_C	PF08438.5	gi|557693537|ref|YP_008796591.1|	-	2e-33	114.8	0.1	5.1e-33	113.5	0.0	1.7	2	0	0	2	2	2	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|557693537|ref|YP_008796591.1|	-	1.2e-18	67.1	0.0	4.2e-18	65.3	0.0	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|557693537|ref|YP_008796591.1|	-	1.7e-08	33.9	1.1	9.2e-05	21.7	0.1	3.5	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
TGS	PF02824.16	gi|557693537|ref|YP_008796591.1|	-	8.5e-08	31.9	0.0	1.7e-07	30.9	0.0	1.4	1	0	0	1	1	1	1	TGS	domain
Dynamin_N	PF00350.18	gi|557693537|ref|YP_008796591.1|	-	0.00042	20.1	0.0	0.12	12.1	0.0	2.4	2	0	0	2	2	2	2	Dynamin	family
GTP_EFTU	PF00009.22	gi|557693537|ref|YP_008796591.1|	-	0.00075	18.9	0.5	1.1	8.6	0.2	2.9	2	1	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
Miro	PF08477.8	gi|557693537|ref|YP_008796591.1|	-	0.073	13.5	0.0	0.29	11.6	0.0	2.1	2	1	0	2	2	2	0	Miro-like	protein
SRPRB	PF09439.5	gi|557693537|ref|YP_008796591.1|	-	0.11	11.6	0.0	1.2	8.3	0.0	2.4	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
Arf	PF00025.16	gi|557693537|ref|YP_008796591.1|	-	0.12	11.6	0.5	7.4	5.7	0.0	2.9	3	0	0	3	3	3	0	ADP-ribosylation	factor	family
LexA_DNA_bind	PF01726.11	gi|557693537|ref|YP_008796591.1|	-	0.14	11.7	0.0	7	6.2	0.0	2.8	2	0	0	2	2	2	0	LexA	DNA	binding	domain
Carb_kinase	PF01256.12	gi|557693538|ref|YP_008796592.1|	-	2.9e-45	154.4	0.6	3.3e-45	154.2	0.4	1.0	1	0	0	1	1	1	1	Carbohydrate	kinase
HK	PF02110.10	gi|557693538|ref|YP_008796592.1|	-	3.4e-09	36.2	0.1	5e-09	35.6	0.1	1.2	1	0	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.7	gi|557693538|ref|YP_008796592.1|	-	8.4e-05	21.8	0.0	0.00015	21.1	0.0	1.5	1	1	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Alba	PF01918.16	gi|557693540|ref|YP_008796594.1|	-	3e-12	45.9	1.0	4.2e-12	45.4	0.7	1.2	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.3	gi|557693540|ref|YP_008796594.1|	-	0.014	15.0	2.5	0.03	13.9	0.6	2.0	1	1	1	2	2	2	0	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
Ras	PF00071.17	gi|557693541|ref|YP_008796595.1|	-	4.8e-16	58.5	0.0	4e-13	49.0	0.0	2.0	2	0	0	2	2	2	2	Ras	family
Miro	PF08477.8	gi|557693541|ref|YP_008796595.1|	-	9.5e-11	42.2	0.0	1.3e-10	41.7	0.0	1.2	1	0	0	1	1	1	1	Miro-like	protein
MMR_HSR1	PF01926.18	gi|557693541|ref|YP_008796595.1|	-	2.2e-05	24.3	0.2	0.00018	21.4	0.1	2.1	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU	PF00009.22	gi|557693541|ref|YP_008796595.1|	-	0.00013	21.4	0.0	0.28	10.5	0.0	2.1	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
FeoB_N	PF02421.13	gi|557693541|ref|YP_008796595.1|	-	0.0018	17.6	0.0	0.14	11.3	0.0	2.1	1	1	1	2	2	2	2	Ferrous	iron	transport	protein	B
MobB	PF03205.9	gi|557693541|ref|YP_008796595.1|	-	0.0046	16.6	0.1	0.0083	15.8	0.1	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Ser_hydrolase	PF06821.8	gi|557693541|ref|YP_008796595.1|	-	0.054	13.1	0.0	0.089	12.3	0.0	1.3	1	0	0	1	1	1	0	Serine	hydrolase
Tombus_movement	PF05318.7	gi|557693541|ref|YP_008796595.1|	-	0.16	12.6	0.5	0.48	11.0	0.0	1.9	2	0	0	2	2	2	0	Tombusvirus	movement	protein
DZR	PF12773.2	gi|557693542|ref|YP_008796596.1|	-	2.6e-06	27.1	7.8	0.0095	15.7	1.6	2.4	2	0	0	2	2	2	2	Double	zinc	ribbon
HypA	PF01155.14	gi|557693542|ref|YP_008796596.1|	-	0.0059	16.2	9.6	0.32	10.6	2.2	3.0	1	1	1	2	2	2	1	Hydrogenase	expression/synthesis	hypA	family
Zn_Tnp_IS1595	PF12760.2	gi|557693542|ref|YP_008796596.1|	-	0.037	13.8	1.2	0.037	13.8	0.8	4.3	2	2	1	4	4	4	0	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|557693542|ref|YP_008796596.1|	-	0.78	9.3	14.2	1.7	8.1	0.8	3.9	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|557693542|ref|YP_008796596.1|	-	1.1	8.9	13.8	5.5	6.7	1.4	3.5	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
zf-C2HC5	PF06221.8	gi|557693542|ref|YP_008796596.1|	-	1.4	8.6	13.9	2.2	8.0	0.6	3.3	1	1	2	3	3	3	0	Putative	zinc	finger	motif,	C2HC5-type
A2L_zn_ribbon	PF08792.5	gi|557693542|ref|YP_008796596.1|	-	1.7	8.1	0.0	1.7	8.1	0.0	3.5	5	0	0	5	5	5	0	A2L	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|557693542|ref|YP_008796596.1|	-	3.2	7.1	13.4	12	5.3	0.0	4.7	4	1	0	4	4	4	0	TFIIB	zinc-binding
UPF0547	PF10571.4	gi|557693542|ref|YP_008796596.1|	-	3.2	7.5	0.0	3.2	7.5	0.0	4.4	4	1	0	4	4	3	0	Uncharacterised	protein	family	UPF0547
DUF35_N	PF12172.3	gi|557693542|ref|YP_008796596.1|	-	5.2	7.1	10.7	0.37	10.7	0.5	2.7	2	1	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc-ribbons_6	PF07191.7	gi|557693542|ref|YP_008796596.1|	-	9.5	6.0	8.7	2.9	7.7	1.3	2.9	1	1	2	3	3	3	0	zinc-ribbons
DNA_RNApol_7kD	PF03604.8	gi|557693542|ref|YP_008796596.1|	-	9.9	5.7	9.4	3.8	7.0	1.6	3.2	3	0	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Ion_trans_2	PF07885.11	gi|557693544|ref|YP_008796598.1|	-	1.8e-16	59.6	7.5	1.8e-16	59.6	5.2	2.1	2	0	0	2	2	2	1	Ion	channel
Ion_trans	PF00520.26	gi|557693544|ref|YP_008796598.1|	-	1.6e-13	50.4	6.5	2.6e-13	49.6	4.5	1.4	1	0	0	1	1	1	1	Ion	transport	protein
Lig_chan	PF00060.21	gi|557693544|ref|YP_008796598.1|	-	3e-05	23.7	1.0	0.00047	19.8	0.0	2.2	2	0	0	2	2	2	1	Ligand-gated	ion	channel
VIT1	PF01988.14	gi|557693544|ref|YP_008796598.1|	-	0.012	15.0	0.6	0.012	15.0	0.4	2.3	2	1	1	3	3	3	0	VIT	family
DUF1576	PF07613.6	gi|557693544|ref|YP_008796598.1|	-	0.041	13.4	0.3	0.041	13.4	0.2	2.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1576)
IRK	PF01007.15	gi|557693544|ref|YP_008796598.1|	-	0.077	11.7	0.2	0.16	10.7	0.0	1.5	2	0	0	2	2	2	0	Inward	rectifier	potassium	channel
MFS_1	PF07690.11	gi|557693545|ref|YP_008796599.1|	-	1.8e-21	76.2	47.4	8.8e-16	57.5	6.2	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|557693545|ref|YP_008796599.1|	-	0.00018	21.2	0.3	0.0027	17.4	0.0	2.6	2	0	0	2	2	2	1	MFS_1	like	family
PALP	PF00291.20	gi|557693546|ref|YP_008796600.1|	-	4.3e-63	213.3	2.6	4.9e-63	213.2	1.8	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ADH_zinc_N	PF00107.21	gi|557693546|ref|YP_008796600.1|	-	0.065	12.7	0.4	1.2	8.6	0.0	2.5	3	0	0	3	3	3	0	Zinc-binding	dehydrogenase
eIF-1a	PF01176.14	gi|557693547|ref|YP_008796601.1|	-	1.8e-21	75.3	0.2	2.2e-21	75.0	0.1	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
GTP_EFTU	PF00009.22	gi|557693548|ref|YP_008796602.1|	-	7.4e-30	103.7	0.0	1.1e-29	103.2	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|557693548|ref|YP_008796602.1|	-	4.6e-18	65.2	0.0	1.1e-17	64.0	0.0	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|557693548|ref|YP_008796602.1|	-	3.9e-08	33.3	0.3	1.4e-07	31.5	0.2	2.0	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|557693548|ref|YP_008796602.1|	-	0.0025	17.7	0.0	0.0068	16.3	0.0	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
ATP_bind_1	PF03029.12	gi|557693548|ref|YP_008796602.1|	-	0.078	12.4	0.0	0.37	10.3	0.0	1.9	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AsnC_trans_reg	PF01037.16	gi|557693549|ref|YP_008796603.1|	-	1.8e-13	49.9	0.5	2e-13	49.8	0.4	1.0	1	0	0	1	1	1	1	AsnC	family
DUF3848	PF12959.2	gi|557693549|ref|YP_008796603.1|	-	0.034	14.0	0.1	0.039	13.9	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3848)
ACT_4	PF13291.1	gi|557693549|ref|YP_008796603.1|	-	0.13	12.5	4.4	5.9	7.3	0.1	2.1	2	0	0	2	2	2	0	ACT	domain
AsnC_trans_reg	PF01037.16	gi|557693550|ref|YP_008796604.1|	-	5.2e-11	42.0	0.0	7e-11	41.6	0.0	1.2	1	0	0	1	1	1	1	AsnC	family
zf-ribbon_3	PF13248.1	gi|557693550|ref|YP_008796604.1|	-	2.1e-06	26.7	1.8	3.3e-06	26.1	1.3	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
UPF0547	PF10571.4	gi|557693550|ref|YP_008796604.1|	-	6.3e-05	22.5	1.4	0.00012	21.7	0.9	1.5	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zinc_ribbon_2	PF13240.1	gi|557693550|ref|YP_008796604.1|	-	7.3e-05	22.1	0.6	0.00011	21.5	0.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|557693550|ref|YP_008796604.1|	-	0.012	15.3	0.3	0.018	14.8	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-H2C2_2	PF13465.1	gi|557693550|ref|YP_008796604.1|	-	0.04	14.2	1.5	3.6	8.0	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF2296	PF10058.4	gi|557693550|ref|YP_008796604.1|	-	0.04	13.6	0.9	0.34	10.7	0.1	2.4	2	1	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
RecR	PF02132.10	gi|557693550|ref|YP_008796604.1|	-	0.086	12.2	2.3	0.11	11.9	1.0	1.5	2	0	0	2	2	2	0	RecR	protein
DUF4471	PF14740.1	gi|557693550|ref|YP_008796604.1|	-	0.088	12.0	0.0	0.1	11.8	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4471)
Mu-like_Com	PF10122.4	gi|557693550|ref|YP_008796604.1|	-	0.091	11.8	0.1	0.17	10.9	0.1	1.5	1	0	0	1	1	1	0	Mu-like	prophage	protein	Com
zf-RanBP	PF00641.13	gi|557693550|ref|YP_008796604.1|	-	0.11	11.5	1.4	0.18	10.9	0.9	1.3	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
Rubredoxin	PF00301.15	gi|557693550|ref|YP_008796604.1|	-	0.14	12.0	0.6	11	5.9	0.0	2.4	2	0	0	2	2	2	0	Rubredoxin
Elf1	PF05129.8	gi|557693550|ref|YP_008796604.1|	-	0.27	10.9	1.8	1.3	8.7	1.2	2.0	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
AsnC_trans_reg	PF01037.16	gi|557693551|ref|YP_008796605.1|	-	9.4e-14	50.8	0.3	1e-13	50.7	0.2	1.0	1	0	0	1	1	1	1	AsnC	family
ACT_4	PF13291.1	gi|557693551|ref|YP_008796605.1|	-	0.0091	16.3	0.1	0.011	16.1	0.0	1.2	1	0	0	1	1	1	1	ACT	domain
GYD	PF08734.6	gi|557693551|ref|YP_008796605.1|	-	0.1	12.3	0.0	0.12	12.0	0.0	1.2	1	0	0	1	1	1	0	GYD	domain
Gln-synt_C	PF00120.19	gi|557693552|ref|YP_008796606.1|	-	2.4e-94	315.3	0.0	3e-94	314.9	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|557693552|ref|YP_008796606.1|	-	3.6e-28	96.9	0.0	8.1e-28	95.8	0.0	1.6	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
VKOR	PF07884.9	gi|557693553|ref|YP_008796607.1|	-	8e-21	74.3	16.9	1.4e-20	73.5	11.7	1.3	1	1	0	1	1	1	1	Vitamin	K	epoxide	reductase	family
AhpC-TSA	PF00578.16	gi|557693554|ref|YP_008796608.1|	-	6.4e-15	54.9	0.0	8.5e-15	54.5	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|557693554|ref|YP_008796608.1|	-	8.4e-14	51.3	0.0	1e-13	51.0	0.0	1.2	1	0	0	1	1	1	1	Redoxin
Thioredoxin	PF00085.15	gi|557693554|ref|YP_008796608.1|	-	1.7e-13	50.1	0.0	2.9e-08	33.3	0.0	2.2	1	1	1	2	2	2	2	Thioredoxin
Thioredoxin_8	PF13905.1	gi|557693554|ref|YP_008796608.1|	-	2.7e-12	46.6	0.0	4e-12	46.0	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|557693554|ref|YP_008796608.1|	-	1.6e-11	44.3	0.0	2.2e-11	43.9	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_7	PF13899.1	gi|557693554|ref|YP_008796608.1|	-	0.002	18.1	0.6	0.0098	15.9	0.4	2.0	1	1	0	1	1	1	1	Thioredoxin-like
DSBA	PF01323.15	gi|557693554|ref|YP_008796608.1|	-	0.0046	16.5	0.1	0.014	15.0	0.0	1.7	1	1	1	2	2	2	1	DSBA-like	thioredoxin	domain
Thioredoxin_4	PF13462.1	gi|557693554|ref|YP_008796608.1|	-	0.0046	16.9	0.1	1.2	9.0	0.0	2.2	2	0	0	2	2	2	2	Thioredoxin
TrbC_Ftype	PF09673.5	gi|557693554|ref|YP_008796608.1|	-	0.0054	16.3	0.0	0.012	15.1	0.0	1.5	2	0	0	2	2	2	1	Type-F	conjugative	transfer	system	pilin	assembly	protein
Thioredoxin_5	PF13743.1	gi|557693554|ref|YP_008796608.1|	-	0.006	16.1	0.0	0.8	9.2	0.0	2.2	1	1	1	2	2	2	2	Thioredoxin
MFS_1	PF07690.11	gi|557693555|ref|YP_008796609.1|	-	2.2e-50	171.3	51.9	2.2e-50	171.3	36.0	1.7	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|557693555|ref|YP_008796609.1|	-	3.5e-10	39.0	15.0	3.5e-10	39.0	10.4	2.6	2	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|557693555|ref|YP_008796609.1|	-	5e-05	21.8	6.5	5e-05	21.8	4.5	2.5	2	1	0	2	2	2	2	MFS/sugar	transport	protein
CTP_synth_N	PF06418.9	gi|557693556|ref|YP_008796610.1|	-	1.5e-122	408.0	0.1	1.9e-122	407.7	0.1	1.1	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|557693556|ref|YP_008796610.1|	-	1.1e-45	155.5	0.0	2.1e-45	154.5	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|557693556|ref|YP_008796610.1|	-	2e-08	33.9	0.0	4.8e-08	32.7	0.0	1.6	2	0	0	2	2	2	1	Peptidase	C26
CbiA	PF01656.18	gi|557693556|ref|YP_008796610.1|	-	7.1e-08	32.0	0.1	1.1e-07	31.4	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ABC2_membrane_3	PF12698.2	gi|557693557|ref|YP_008796611.1|	-	4.8e-30	104.7	23.4	5.6e-30	104.5	16.2	1.0	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|557693557|ref|YP_008796611.1|	-	1.2e-25	89.8	22.3	1.8e-25	89.3	15.5	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|557693557|ref|YP_008796611.1|	-	2.2e-13	49.8	16.7	3e-13	49.4	11.6	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|557693557|ref|YP_008796611.1|	-	8.2	5.6	30.6	29	3.8	18.3	2.8	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|557693558|ref|YP_008796612.1|	-	4.1e-25	88.6	0.0	5.5e-25	88.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557693558|ref|YP_008796612.1|	-	7.7e-13	49.0	0.0	4.7e-06	26.7	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|557693558|ref|YP_008796612.1|	-	0.00033	20.1	0.1	0.00058	19.3	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|557693558|ref|YP_008796612.1|	-	0.00046	19.4	0.1	0.31	10.2	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|557693558|ref|YP_008796612.1|	-	0.00069	20.0	0.0	0.00083	19.7	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|557693558|ref|YP_008796612.1|	-	0.0068	14.9	0.0	0.63	8.4	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.1	gi|557693558|ref|YP_008796612.1|	-	0.012	15.2	0.0	0.019	14.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
6PGD	PF00393.14	gi|557693558|ref|YP_008796612.1|	-	0.014	14.6	0.0	0.02	14.0	0.0	1.2	1	0	0	1	1	1	0	6-phosphogluconate	dehydrogenase,	C-terminal	domain
AAA_22	PF13401.1	gi|557693558|ref|YP_008796612.1|	-	0.026	14.6	0.0	0.042	13.9	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|557693558|ref|YP_008796612.1|	-	0.035	13.8	0.1	0.1	12.3	0.1	1.8	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA	PF00004.24	gi|557693558|ref|YP_008796612.1|	-	0.04	14.1	0.0	0.069	13.3	0.0	1.4	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|557693558|ref|YP_008796612.1|	-	0.041	13.7	0.0	0.14	12.0	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|557693558|ref|YP_008796612.1|	-	0.05	13.2	0.6	0.1	12.2	0.1	1.7	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
SRP54	PF00448.17	gi|557693558|ref|YP_008796612.1|	-	0.057	12.8	0.1	0.11	11.8	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_5	PF07728.9	gi|557693558|ref|YP_008796612.1|	-	0.058	13.1	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.1	gi|557693558|ref|YP_008796612.1|	-	0.13	12.1	0.0	0.21	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|557693558|ref|YP_008796612.1|	-	0.14	12.4	0.0	0.24	11.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|557693558|ref|YP_008796612.1|	-	0.15	11.9	0.0	0.28	11.1	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
EamA	PF00892.15	gi|557693559|ref|YP_008796613.1|	-	4e-19	68.8	19.4	2.7e-09	37.1	8.0	2.3	2	1	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|557693559|ref|YP_008796613.1|	-	0.0042	17.2	10.8	0.023	14.9	3.8	3.5	2	2	2	4	4	4	2	Multidrug	resistance	efflux	transporter
UPF0546	PF10639.4	gi|557693559|ref|YP_008796613.1|	-	0.03	14.1	4.7	3.4	7.5	0.1	3.4	3	1	1	4	4	4	0	Uncharacterised	protein	family	UPF0546
UPF0197	PF05251.7	gi|557693559|ref|YP_008796613.1|	-	0.18	12.1	0.3	0.18	12.1	0.2	3.2	3	1	1	4	4	4	0	Uncharacterised	protein	family	(UPF0197)
DUF4131	PF13567.1	gi|557693559|ref|YP_008796613.1|	-	2.1	7.7	9.4	17	4.7	4.9	2.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
HSDR_N	PF04313.9	gi|557693560|ref|YP_008796614.1|	-	3.9e-06	26.7	0.0	0.021	14.5	0.0	2.3	1	1	1	2	2	2	2	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
HSDR_N_2	PF13588.1	gi|557693560|ref|YP_008796614.1|	-	0.079	12.7	0.0	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
NifU_N	PF01592.11	gi|557693561|ref|YP_008796615.1|	-	2.2e-29	101.9	0.0	2.5e-29	101.7	0.0	1.0	1	0	0	1	1	1	1	NifU-like	N	terminal	domain
SufE	PF02657.10	gi|557693561|ref|YP_008796615.1|	-	0.14	11.7	0.0	0.16	11.6	0.0	1.1	1	0	0	1	1	1	0	Fe-S	metabolism	associated	domain
HD	PF01966.17	gi|557693562|ref|YP_008796616.1|	-	2.9e-13	49.9	1.2	2.9e-13	49.9	0.8	2.1	2	1	0	2	2	2	1	HD	domain
HDOD	PF08668.7	gi|557693562|ref|YP_008796616.1|	-	0.0051	16.1	0.1	0.0086	15.3	0.0	1.4	1	0	0	1	1	1	1	HDOD	domain
Uso1_p115_C	PF04871.8	gi|557693564|ref|YP_008796618.1|	-	0.24	11.3	4.0	0.49	10.3	2.8	1.5	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
TMPIT	PF07851.8	gi|557693564|ref|YP_008796618.1|	-	5.3	6.0	8.2	0.12	11.3	1.2	1.4	2	0	0	2	2	2	0	TMPIT-like	protein
Thymidylate_kin	PF02223.12	gi|557693566|ref|YP_008796620.1|	-	1.7e-48	164.5	0.1	1.9e-48	164.3	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_28	PF13521.1	gi|557693566|ref|YP_008796620.1|	-	4.4e-09	36.5	0.0	5.6e-09	36.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
dNK	PF01712.14	gi|557693566|ref|YP_008796620.1|	-	2.5e-08	33.9	0.3	1.2e-07	31.7	0.2	1.9	1	1	0	1	1	1	1	Deoxynucleoside	kinase
AAA_18	PF13238.1	gi|557693566|ref|YP_008796620.1|	-	1.5e-07	31.7	0.2	4.8e-07	30.1	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|557693566|ref|YP_008796620.1|	-	2.6e-07	31.4	0.0	5.3e-07	30.4	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|557693566|ref|YP_008796620.1|	-	1e-06	28.6	0.1	1.8e-06	27.8	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|557693566|ref|YP_008796620.1|	-	1.2e-06	28.4	1.7	0.00016	21.5	1.2	2.3	1	1	0	1	1	1	1	Shikimate	kinase
AAA_22	PF13401.1	gi|557693566|ref|YP_008796620.1|	-	0.0056	16.8	0.1	0.048	13.8	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|557693566|ref|YP_008796620.1|	-	0.0059	16.3	0.0	0.012	15.3	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
APS_kinase	PF01583.15	gi|557693566|ref|YP_008796620.1|	-	0.0097	15.5	0.1	0.024	14.3	0.0	1.8	2	1	0	2	2	2	1	Adenylylsulphate	kinase
CBS	PF00571.23	gi|557693566|ref|YP_008796620.1|	-	0.01	15.6	0.7	0.42	10.4	0.1	3.0	3	0	0	3	3	3	0	CBS	domain
TIR_2	PF13676.1	gi|557693566|ref|YP_008796620.1|	-	0.012	15.8	0.1	0.18	11.9	0.0	2.5	1	1	1	2	2	2	0	TIR	domain
SRP54	PF00448.17	gi|557693566|ref|YP_008796620.1|	-	0.014	14.8	0.0	0.031	13.7	0.0	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA	PF00004.24	gi|557693566|ref|YP_008796620.1|	-	0.025	14.7	0.1	0.036	14.2	0.1	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
CbiA	PF01656.18	gi|557693566|ref|YP_008796620.1|	-	0.033	13.5	0.3	0.067	12.5	0.2	1.8	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
KTI12	PF08433.5	gi|557693566|ref|YP_008796620.1|	-	0.039	13.1	0.4	0.42	9.7	0.3	2.2	1	1	0	1	1	1	0	Chromatin	associated	protein	KTI12
PPK2	PF03976.9	gi|557693566|ref|YP_008796620.1|	-	0.059	12.6	0.2	0.47	9.7	0.0	2.0	2	0	0	2	2	2	0	Polyphosphate	kinase	2	(PPK2)
ArgK	PF03308.11	gi|557693566|ref|YP_008796620.1|	-	0.065	12.0	0.0	0.1	11.3	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
ADK	PF00406.17	gi|557693566|ref|YP_008796620.1|	-	0.076	12.8	0.8	11	5.8	0.1	2.4	2	1	0	2	2	2	0	Adenylate	kinase
AAA_30	PF13604.1	gi|557693566|ref|YP_008796620.1|	-	0.078	12.5	0.1	0.14	11.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|557693566|ref|YP_008796620.1|	-	0.098	12.0	0.0	0.12	11.7	0.0	1.4	1	1	0	1	1	1	0	AAA-like	domain
ILVD_EDD	PF00920.16	gi|557693567|ref|YP_008796621.1|	-	3.2e-221	735.2	0.4	3.6e-221	735.1	0.2	1.0	1	0	0	1	1	1	1	Dehydratase	family
MOZART2	PF12926.2	gi|557693567|ref|YP_008796621.1|	-	0.14	11.7	0.0	0.37	10.4	0.0	1.7	1	0	0	1	1	1	0	Mitotic-spindle	organizing	gamma-tubulin	ring	associated
UPF0147	PF03685.8	gi|557693568|ref|YP_008796622.1|	-	2.5e-30	104.1	2.0	2.7e-30	104.0	1.4	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
FerA	PF08165.6	gi|557693568|ref|YP_008796622.1|	-	0.083	12.5	1.0	8.3	6.1	0.1	2.2	1	1	1	2	2	2	0	FerA	(NUC095)	domain
TusA	PF01206.12	gi|557693568|ref|YP_008796622.1|	-	0.099	12.2	0.0	0.18	11.4	0.0	1.5	1	1	0	1	1	1	0	Sulfurtransferase	TusA
SpoIIIAH	PF12685.2	gi|557693568|ref|YP_008796622.1|	-	0.16	11.4	1.9	2.2	7.7	0.4	2.0	1	1	1	2	2	2	0	SpoIIIAH-like	protein
CitMHS	PF03600.11	gi|557693569|ref|YP_008796623.1|	-	2.3e-33	115.2	50.0	2.4e-28	98.7	17.7	2.2	1	1	1	2	2	2	2	Citrate	transporter
ArsB	PF02040.10	gi|557693569|ref|YP_008796623.1|	-	9.6e-10	37.9	34.5	2.3e-09	36.7	23.9	1.6	1	1	0	1	1	1	1	Arsenical	pump	membrane	protein
PDT	PF00800.13	gi|557693570|ref|YP_008796624.1|	-	1.1e-63	214.0	0.1	1.4e-63	213.7	0.0	1.1	1	0	0	1	1	1	1	Prephenate	dehydratase
ACT	PF01842.20	gi|557693570|ref|YP_008796624.1|	-	8.4e-10	37.9	0.0	1.6e-09	37.0	0.0	1.5	1	0	0	1	1	1	1	ACT	domain
NAD_binding_2	PF03446.10	gi|557693571|ref|YP_008796625.1|	-	5.5e-56	188.8	0.5	8.7e-56	188.2	0.3	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|557693571|ref|YP_008796625.1|	-	3.4e-31	107.8	0.0	6.2e-31	106.9	0.0	1.4	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|557693571|ref|YP_008796625.1|	-	5.2e-07	30.0	0.0	1.2e-06	28.8	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|557693571|ref|YP_008796625.1|	-	1.2e-06	27.8	0.1	2.4e-06	26.8	0.0	1.5	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|557693571|ref|YP_008796625.1|	-	0.00013	21.3	0.0	0.00023	20.5	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Shikimate_DH	PF01488.15	gi|557693571|ref|YP_008796625.1|	-	0.00027	21.0	0.0	0.00042	20.4	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|557693571|ref|YP_008796625.1|	-	0.00067	19.0	0.0	1.3	8.3	0.0	2.5	2	0	0	2	2	2	2	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|557693571|ref|YP_008796625.1|	-	0.011	15.3	0.0	0.023	14.3	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|557693571|ref|YP_008796625.1|	-	0.097	11.6	0.0	0.25	10.2	0.0	1.8	1	1	0	1	1	1	0	Saccharopine	dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|557693571|ref|YP_008796625.1|	-	0.13	12.8	0.0	0.23	12.0	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
RHH_1	PF01402.16	gi|557693573|ref|YP_008796627.1|	-	2.2e-06	27.2	0.1	2.6e-06	27.0	0.0	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_2	PF03693.9	gi|557693573|ref|YP_008796627.1|	-	0.037	14.2	0.0	0.037	14.2	0.0	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0156)
Cpn60_TCP1	PF00118.19	gi|557693574|ref|YP_008796628.1|	-	3.9e-174	579.8	16.0	4.5e-174	579.6	11.1	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
TFIIE_beta	PF02186.10	gi|557693574|ref|YP_008796628.1|	-	0.17	11.8	0.5	0.66	10.0	0.0	2.2	3	0	0	3	3	3	0	TFIIE	beta	subunit	core	domain
RNA_pol_Rpb6	PF01192.17	gi|557693575|ref|YP_008796629.1|	-	2.3e-15	56.0	0.1	3.8e-15	55.3	0.0	1.3	2	0	0	2	2	2	1	RNA	polymerase	Rpb6
2TM	PF13239.1	gi|557693576|ref|YP_008796630.1|	-	0.041	13.9	1.3	0.052	13.6	0.9	1.1	1	0	0	1	1	1	0	2TM	domain
DUF4199	PF13858.1	gi|557693576|ref|YP_008796630.1|	-	0.065	13.1	3.6	0.076	12.9	2.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4199)
SPC25	PF06703.6	gi|557693576|ref|YP_008796630.1|	-	0.071	12.6	1.1	0.089	12.3	0.7	1.0	1	0	0	1	1	1	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
TctB	PF07331.6	gi|557693576|ref|YP_008796630.1|	-	0.1	12.2	3.9	0.13	11.9	2.7	1.3	1	1	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
DUF763	PF05559.6	gi|557693577|ref|YP_008796631.1|	-	5.3e-63	212.9	0.0	6.5e-63	212.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
NAD_binding_5	PF07994.7	gi|557693578|ref|YP_008796632.1|	-	4.6e-52	177.3	0.0	1.2e-51	175.9	0.0	1.6	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|557693578|ref|YP_008796632.1|	-	2.2e-33	114.3	0.0	3.6e-33	113.7	0.0	1.3	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
PadR	PF03551.9	gi|557693579|ref|YP_008796633.1|	-	3.7e-17	61.8	0.3	4.8e-17	61.4	0.2	1.1	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
RTP	PF02334.11	gi|557693579|ref|YP_008796633.1|	-	0.0052	16.7	0.0	0.0075	16.2	0.0	1.2	1	0	0	1	1	1	1	Replication	terminator	protein
TrmB	PF01978.14	gi|557693579|ref|YP_008796633.1|	-	0.017	14.8	0.3	0.095	12.4	0.2	2.3	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Replic_Relax	PF13814.1	gi|557693579|ref|YP_008796633.1|	-	0.022	14.6	0.1	0.025	14.4	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
HTH_34	PF13601.1	gi|557693579|ref|YP_008796633.1|	-	0.033	14.2	0.0	0.052	13.5	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|557693579|ref|YP_008796633.1|	-	0.072	12.9	0.0	0.15	11.8	0.0	1.6	1	1	0	1	1	1	0	Winged	helix-turn-helix
Mrr_N	PF14338.1	gi|557693579|ref|YP_008796633.1|	-	0.086	12.9	0.2	0.21	11.7	0.1	1.6	1	1	1	2	2	2	0	Mrr	N-terminal	domain
HTH_27	PF13463.1	gi|557693579|ref|YP_008796633.1|	-	0.094	13.0	0.0	0.22	11.8	0.0	1.7	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
ECH	PF00378.15	gi|557693580|ref|YP_008796634.1|	-	2e-71	239.9	0.0	3.5e-71	239.1	0.0	1.4	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH_N	PF02737.13	gi|557693580|ref|YP_008796634.1|	-	1.3e-68	230.2	4.0	2.3e-68	229.3	2.8	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|557693580|ref|YP_008796634.1|	-	1.3e-48	163.3	0.7	9.1e-27	93.3	0.0	3.8	4	0	0	4	4	4	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|557693580|ref|YP_008796634.1|	-	0.00011	22.0	0.2	0.00025	20.7	0.2	1.7	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ECH_C	PF13766.1	gi|557693580|ref|YP_008796634.1|	-	0.00012	22.1	0.3	0.00033	20.7	0.0	1.8	2	0	0	2	2	1	1	2-enoyl-CoA	Hydratase	C-terminal	region
NAD_binding_2	PF03446.10	gi|557693580|ref|YP_008796634.1|	-	0.00045	20.0	1.6	0.0019	18.0	1.1	2.1	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|557693580|ref|YP_008796634.1|	-	0.0008	19.0	0.4	0.0018	17.8	0.3	1.6	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.9	gi|557693580|ref|YP_008796634.1|	-	0.002	17.5	0.2	0.0041	16.5	0.1	1.6	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
XdhC_C	PF13478.1	gi|557693580|ref|YP_008796634.1|	-	0.0051	17.1	0.1	0.013	15.7	0.1	1.8	1	0	0	1	1	1	1	XdhC	Rossmann	domain
UPF0146	PF03686.8	gi|557693580|ref|YP_008796634.1|	-	0.0052	16.6	0.3	0.032	14.0	0.2	2.4	2	0	0	2	2	2	1	Uncharacterised	protein	family	(UPF0146)
Pyr_redox	PF00070.22	gi|557693580|ref|YP_008796634.1|	-	0.014	15.8	1.0	0.045	14.1	0.7	1.9	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
F420_oxidored	PF03807.12	gi|557693580|ref|YP_008796634.1|	-	0.025	14.9	0.4	0.18	12.2	0.3	2.6	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
DAO	PF01266.19	gi|557693580|ref|YP_008796634.1|	-	0.026	13.4	1.9	0.056	12.3	1.3	1.5	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|557693580|ref|YP_008796634.1|	-	0.058	13.2	0.1	0.15	11.9	0.0	1.7	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_7	PF13241.1	gi|557693580|ref|YP_008796634.1|	-	0.13	12.5	0.6	0.42	10.8	0.4	1.9	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Aminotran_5	PF00266.14	gi|557693581|ref|YP_008796635.1|	-	1.7e-152	507.4	0.1	1.9e-152	507.2	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
SelA	PF03841.8	gi|557693581|ref|YP_008796635.1|	-	0.00015	20.6	0.0	0.00024	19.9	0.0	1.3	1	0	0	1	1	1	1	L-seryl-tRNA	selenium	transferase
Beta_elim_lyase	PF01212.16	gi|557693581|ref|YP_008796635.1|	-	0.00069	18.8	0.0	0.0032	16.6	0.0	1.8	1	1	0	2	2	2	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|557693581|ref|YP_008796635.1|	-	0.0042	15.4	0.0	0.0087	14.3	0.0	1.6	2	0	0	2	2	2	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.12	gi|557693581|ref|YP_008796635.1|	-	0.022	13.7	0.2	0.051	12.6	0.1	1.6	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
tRNA-Thr_ED	PF08915.6	gi|557693582|ref|YP_008796636.1|	-	4.8e-37	127.0	0.0	1e-36	125.9	0.0	1.6	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.15	gi|557693582|ref|YP_008796636.1|	-	2.4e-17	62.6	0.2	5.6e-17	61.4	0.1	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.20	gi|557693582|ref|YP_008796636.1|	-	1.3e-14	54.1	0.4	3.3e-14	52.8	0.2	1.7	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Parvo_coat_N	PF08398.5	gi|557693582|ref|YP_008796636.1|	-	0.08	12.7	0.0	0.17	11.7	0.0	1.5	1	0	0	1	1	1	0	Parvovirus	coat	protein	VP1
AP_endonuc_2	PF01261.19	gi|557693582|ref|YP_008796636.1|	-	0.11	11.7	0.1	0.32	10.2	0.0	1.7	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
Antitoxin-MazE	PF04014.13	gi|557693583|ref|YP_008796637.1|	-	0.0011	18.5	0.1	0.0082	15.8	0.1	2.1	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
Bromodomain	PF00439.20	gi|557693583|ref|YP_008796637.1|	-	0.0033	17.3	0.1	0.0047	16.8	0.0	1.3	1	0	0	1	1	1	1	Bromodomain
PIN	PF01850.16	gi|557693584|ref|YP_008796638.1|	-	2.8e-15	56.7	0.5	3.3e-15	56.4	0.4	1.1	1	0	0	1	1	1	1	PIN	domain
Ferritin	PF00210.19	gi|557693585|ref|YP_008796639.1|	-	8.4e-25	87.1	0.4	9.4e-25	87.0	0.3	1.0	1	0	0	1	1	1	1	Ferritin-like	domain
Rubrerythrin	PF02915.12	gi|557693585|ref|YP_008796639.1|	-	4.3e-07	30.3	0.1	5.5e-07	29.9	0.1	1.2	1	0	0	1	1	1	1	Rubrerythrin
Ferritin_2	PF13668.1	gi|557693585|ref|YP_008796639.1|	-	0.00036	20.4	1.4	0.15	11.9	0.0	2.4	1	1	1	2	2	2	2	Ferritin-like	domain
DUF2383	PF09537.5	gi|557693585|ref|YP_008796639.1|	-	0.00048	20.3	0.2	0.15	12.3	0.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF2383)
S6PP_C	PF08472.5	gi|557693585|ref|YP_008796639.1|	-	0.027	14.0	0.2	3.6	7.2	0.0	2.1	2	0	0	2	2	2	0	Sucrose-6-phosphate	phosphohydrolase	C-terminal
COQ7	PF03232.8	gi|557693585|ref|YP_008796639.1|	-	0.086	12.3	0.1	1.3	8.4	0.0	2.1	2	0	0	2	2	2	0	Ubiquinone	biosynthesis	protein	COQ7
Uso1_p115_C	PF04871.8	gi|557693586|ref|YP_008796640.1|	-	0.031	14.1	1.2	0.043	13.7	0.9	1.3	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
DUF4381	PF14316.1	gi|557693587|ref|YP_008796641.1|	-	0.032	14.3	1.1	0.037	14.1	0.7	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4381)
Peptidase_M9_N	PF08453.5	gi|557693587|ref|YP_008796641.1|	-	0.035	13.4	0.1	0.04	13.2	0.1	1.1	1	0	0	1	1	1	0	Peptidase	family	M9	N-terminal
MMR_HSR1	PF01926.18	gi|557693588|ref|YP_008796642.1|	-	1.4e-17	63.6	0.1	2.9e-17	62.6	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP-bdg_N	PF13167.1	gi|557693588|ref|YP_008796642.1|	-	6e-13	48.7	0.0	1.9e-12	47.1	0.0	1.9	2	0	0	2	2	1	1	GTP-binding	GTPase	N-terminal
FeoB_N	PF02421.13	gi|557693588|ref|YP_008796642.1|	-	2.6e-07	30.0	0.0	6.3e-07	28.8	0.0	1.7	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|557693588|ref|YP_008796642.1|	-	7.6e-07	28.7	0.2	4.4e-05	22.9	0.0	2.4	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Miro	PF08477.8	gi|557693588|ref|YP_008796642.1|	-	1.5e-05	25.4	0.3	5.6e-05	23.6	0.0	2.2	3	1	0	3	3	2	1	Miro-like	protein
Arf	PF00025.16	gi|557693588|ref|YP_008796642.1|	-	4.6e-05	22.7	1.6	0.00012	21.4	0.1	2.3	2	1	0	2	2	2	1	ADP-ribosylation	factor	family
Ras	PF00071.17	gi|557693588|ref|YP_008796642.1|	-	0.00016	21.1	0.0	0.00046	19.6	0.0	1.8	1	1	0	1	1	1	1	Ras	family
SRPRB	PF09439.5	gi|557693588|ref|YP_008796642.1|	-	0.0096	15.1	0.0	0.019	14.1	0.0	1.4	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
ABC_tran	PF00005.22	gi|557693588|ref|YP_008796642.1|	-	0.012	15.8	0.1	0.073	13.3	0.0	2.1	1	1	1	2	2	2	0	ABC	transporter
OEP	PF02321.13	gi|557693588|ref|YP_008796642.1|	-	0.023	14.2	2.1	6.7	6.2	0.0	2.9	3	0	0	3	3	3	0	Outer	membrane	efflux	protein
PduV-EutP	PF10662.4	gi|557693588|ref|YP_008796642.1|	-	0.046	13.2	0.0	3	7.3	0.0	2.7	2	1	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
HTH_19	PF12844.2	gi|557693588|ref|YP_008796642.1|	-	0.08	13.0	0.8	3.7	7.6	0.0	3.3	2	1	1	3	3	3	0	Helix-turn-helix	domain
Dynamin_N	PF00350.18	gi|557693588|ref|YP_008796642.1|	-	0.13	12.1	0.3	0.39	10.5	0.0	1.9	2	1	0	2	2	2	0	Dynamin	family
AAA_23	PF13476.1	gi|557693588|ref|YP_008796642.1|	-	0.72	10.1	6.4	4.1	7.6	0.1	2.5	2	0	0	2	2	2	0	AAA	domain
TGT_C2	PF14810.1	gi|557693589|ref|YP_008796643.1|	-	1.7e-23	82.2	0.0	2.8e-23	81.5	0.0	1.4	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.15	gi|557693589|ref|YP_008796643.1|	-	6.4e-12	45.0	5.6	9.5e-12	44.4	3.9	1.3	1	0	0	1	1	1	1	PUA	domain
UPF0113	PF03657.8	gi|557693589|ref|YP_008796643.1|	-	0.014	15.0	0.0	0.018	14.7	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0113)
FBPase	PF00316.15	gi|557693589|ref|YP_008796643.1|	-	0.02	13.7	0.0	0.024	13.4	0.0	1.1	1	0	0	1	1	1	0	Fructose-1-6-bisphosphatase
UBA	PF00627.26	gi|557693590|ref|YP_008796644.1|	-	2.8e-07	30.1	0.0	5.9e-07	29.1	0.0	1.6	1	0	0	1	1	1	1	UBA/TS-N	domain
NAC	PF01849.13	gi|557693590|ref|YP_008796644.1|	-	6.3e-07	28.8	0.1	1e-06	28.1	0.1	1.4	1	0	0	1	1	1	1	NAC	domain
UBA_4	PF14555.1	gi|557693590|ref|YP_008796644.1|	-	0.0033	16.9	0.0	0.005	16.3	0.0	1.3	1	0	0	1	1	1	1	UBA-like	domain
HTH_20	PF12840.2	gi|557693591|ref|YP_008796645.1|	-	5.1e-10	39.0	0.1	2.1e-09	37.0	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|557693591|ref|YP_008796645.1|	-	1e-07	31.4	0.4	2.5e-06	27.0	0.1	3.2	2	1	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.1	gi|557693591|ref|YP_008796645.1|	-	2.1e-06	27.4	0.9	5e-06	26.2	0.6	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
ATP-cone	PF03477.11	gi|557693591|ref|YP_008796645.1|	-	7.7e-05	23.0	0.1	0.00019	21.8	0.1	1.7	1	1	0	1	1	1	1	ATP	cone	domain
DUF4364	PF14277.1	gi|557693591|ref|YP_008796645.1|	-	0.00095	18.8	0.2	0.006	16.2	0.2	2.0	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4364)
TerB	PF05099.8	gi|557693591|ref|YP_008796645.1|	-	0.012	15.3	0.1	0.028	14.1	0.1	1.6	1	0	0	1	1	1	0	Tellurite	resistance	protein	TerB
OTCace	PF00185.19	gi|557693592|ref|YP_008796646.1|	-	5.9e-50	169.2	0.2	1.2e-49	168.1	0.1	1.6	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|557693592|ref|YP_008796646.1|	-	2e-46	157.1	0.0	4.6e-46	156.0	0.0	1.5	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
Oxidored_nitro	PF00148.14	gi|557693592|ref|YP_008796646.1|	-	0.017	13.8	0.0	0.023	13.3	0.0	1.2	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
Fe-ADH	PF00465.14	gi|557693592|ref|YP_008796646.1|	-	0.081	11.5	0.0	0.19	10.3	0.0	1.6	2	0	0	2	2	2	0	Iron-containing	alcohol	dehydrogenase
Spt5-NGN	PF03439.8	gi|557693593|ref|YP_008796647.1|	-	2.9e-15	55.7	0.0	1.1e-09	37.9	0.0	2.4	2	0	0	2	2	2	2	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|557693593|ref|YP_008796647.1|	-	3.1e-05	23.5	0.4	6.6e-05	22.4	0.3	1.6	1	0	0	1	1	1	1	KOW	motif
NusG	PF02357.14	gi|557693593|ref|YP_008796647.1|	-	0.00033	20.8	0.0	0.5	10.6	0.0	2.5	2	0	0	2	2	2	2	Transcription	termination	factor	nusG
Ribosomal_L11	PF00298.14	gi|557693594|ref|YP_008796648.1|	-	1.8e-23	82.4	0.8	2.4e-23	82.0	0.5	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
Ribosomal_L11_N	PF03946.9	gi|557693594|ref|YP_008796648.1|	-	5.7e-19	67.3	0.1	9.6e-19	66.6	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L1	PF00687.16	gi|557693595|ref|YP_008796649.1|	-	2.8e-44	151.1	2.5	3.4e-44	150.8	1.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
PrkA	PF06798.7	gi|557693595|ref|YP_008796649.1|	-	0.19	10.9	1.9	0.21	10.8	0.1	1.8	2	0	0	2	2	2	0	PrkA	serine	protein	kinase	C-terminal	domain
Cep57_MT_bd	PF06657.8	gi|557693595|ref|YP_008796649.1|	-	0.35	10.8	1.9	11	6.0	0.1	2.6	2	0	0	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
Ribosomal_L10	PF00466.15	gi|557693596|ref|YP_008796650.1|	-	8e-18	64.2	1.5	1.3e-17	63.5	0.5	1.6	2	0	0	2	2	2	1	Ribosomal	protein	L10
tRNA-synt_2c	PF01411.14	gi|557693597|ref|YP_008796651.1|	-	2.4e-111	372.7	0.0	3.3e-111	372.2	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|557693597|ref|YP_008796651.1|	-	3.2e-13	49.3	0.4	6.2e-13	48.4	0.3	1.5	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.14	gi|557693597|ref|YP_008796651.1|	-	0.0052	16.4	1.1	0.015	14.9	0.8	1.8	1	0	0	1	1	1	1	DHHA1	domain
DrsE_2	PF13686.1	gi|557693597|ref|YP_008796651.1|	-	0.019	14.7	0.0	0.036	13.8	0.0	1.4	1	0	0	1	1	1	0	DsrE/DsrF/DrsH-like	family
DegT_DnrJ_EryC1	PF01041.12	gi|557693597|ref|YP_008796651.1|	-	0.061	12.3	0.0	0.11	11.4	0.0	1.4	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
OS-D	PF03392.8	gi|557693597|ref|YP_008796651.1|	-	0.15	12.0	0.0	0.34	10.9	0.0	1.5	1	0	0	1	1	1	0	Insect	pheromone-binding	family,	A10/OS-D
ABC_tran	PF00005.22	gi|557693599|ref|YP_008796653.1|	-	4.4e-30	104.7	0.0	5.7e-30	104.4	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557693599|ref|YP_008796653.1|	-	1.3e-14	54.8	0.3	4.1e-09	36.8	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|557693599|ref|YP_008796653.1|	-	0.00064	18.8	0.0	0.043	12.8	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|557693599|ref|YP_008796653.1|	-	0.0008	18.8	0.0	0.0013	18.2	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|557693599|ref|YP_008796653.1|	-	0.0079	16.5	0.0	0.013	15.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|557693599|ref|YP_008796653.1|	-	0.016	15.2	0.4	0.43	10.5	0.1	2.2	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_19	PF13245.1	gi|557693599|ref|YP_008796653.1|	-	0.021	14.5	0.0	0.05	13.3	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
UPF0079	PF02367.12	gi|557693599|ref|YP_008796653.1|	-	0.023	14.3	0.2	0.55	9.8	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
T2SE	PF00437.15	gi|557693599|ref|YP_008796653.1|	-	0.027	13.3	0.1	0.048	12.5	0.1	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA	PF00004.24	gi|557693599|ref|YP_008796653.1|	-	0.035	14.3	0.0	0.21	11.7	0.0	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SbcCD_C	PF13558.1	gi|557693599|ref|YP_008796653.1|	-	0.069	13.0	0.0	0.12	12.2	0.0	1.4	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
Arch_ATPase	PF01637.13	gi|557693599|ref|YP_008796653.1|	-	0.072	12.7	0.0	0.12	12.0	0.0	1.6	1	1	0	1	1	1	0	Archaeal	ATPase
AAA_25	PF13481.1	gi|557693599|ref|YP_008796653.1|	-	0.096	12.0	0.2	0.65	9.3	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|557693599|ref|YP_008796653.1|	-	0.1	12.1	0.0	0.23	11.0	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|557693599|ref|YP_008796653.1|	-	0.13	11.7	0.2	0.24	10.8	0.2	1.4	1	0	0	1	1	1	0	AAA-like	domain
AAA_22	PF13401.1	gi|557693599|ref|YP_008796653.1|	-	0.13	12.4	0.3	0.53	10.4	0.2	2.1	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|557693599|ref|YP_008796653.1|	-	0.2	11.3	0.8	0.88	9.2	0.1	2.1	2	1	0	2	2	2	0	NACHT	domain
Ribosomal_60s	PF00428.14	gi|557693600|ref|YP_008796654.1|	-	4.7e-14	52.5	14.0	5.9e-14	52.2	9.7	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
TerB-C	PF15615.1	gi|557693600|ref|YP_008796654.1|	-	0.054	13.7	1.6	0.063	13.5	1.1	1.1	1	0	0	1	1	1	0	TerB-C	domain
DUF2057	PF09829.4	gi|557693600|ref|YP_008796654.1|	-	0.083	12.5	1.0	0.095	12.3	0.7	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2057)
Stm1_N	PF09598.5	gi|557693600|ref|YP_008796654.1|	-	0.83	10.3	5.8	1.3	9.8	4.0	1.2	1	0	0	1	1	1	0	Stm1
DUF763	PF05559.6	gi|557693601|ref|YP_008796655.1|	-	2e-84	283.3	0.0	2.3e-84	283.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
DUF2336	PF10098.4	gi|557693601|ref|YP_008796655.1|	-	0.013	14.7	1.1	0.037	13.2	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2336)
EF1_GNE	PF00736.14	gi|557693602|ref|YP_008796656.1|	-	6.4e-17	61.0	0.1	7e-17	60.9	0.1	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
NTP_transf_3	PF12804.2	gi|557693603|ref|YP_008796657.1|	-	8.5e-26	90.9	0.1	1.4e-25	90.2	0.1	1.4	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_transf_3	PF02348.14	gi|557693603|ref|YP_008796657.1|	-	0.0013	18.3	0.0	0.0021	17.7	0.0	1.5	1	1	0	1	1	1	1	Cytidylyltransferase
SNAP	PF14938.1	gi|557693603|ref|YP_008796657.1|	-	0.0025	17.0	1.0	0.0042	16.2	0.7	1.3	1	0	0	1	1	1	1	Soluble	NSF	attachment	protein,	SNAP
DOG1	PF14144.1	gi|557693603|ref|YP_008796657.1|	-	0.089	12.8	0.0	0.25	11.4	0.0	1.8	1	0	0	1	1	1	0	Seed	dormancy	control
MobB	PF03205.9	gi|557693604|ref|YP_008796658.1|	-	9.9e-25	86.8	0.1	1.2e-24	86.6	0.1	1.1	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CbiA	PF01656.18	gi|557693604|ref|YP_008796658.1|	-	0.0019	17.6	0.0	0.003	16.9	0.0	1.4	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
PduV-EutP	PF10662.4	gi|557693604|ref|YP_008796658.1|	-	0.039	13.4	0.0	0.047	13.1	0.0	1.2	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_25	PF13481.1	gi|557693604|ref|YP_008796658.1|	-	0.078	12.3	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Torsin	PF06309.6	gi|557693604|ref|YP_008796658.1|	-	0.087	12.7	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	Torsin
AAA_14	PF13173.1	gi|557693604|ref|YP_008796658.1|	-	0.11	12.3	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|557693604|ref|YP_008796658.1|	-	0.11	12.1	0.2	1.5	8.4	0.0	2.3	2	1	0	2	2	2	0	NTPase
Rib_5-P_isom_A	PF06026.9	gi|557693605|ref|YP_008796659.1|	-	2.8e-48	163.4	0.0	3.5e-48	163.1	0.0	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.17	gi|557693605|ref|YP_008796659.1|	-	2.3e-06	27.3	0.0	1.6e-05	24.6	0.0	1.9	2	0	0	2	2	2	1	DeoR	C	terminal	sensor	domain
WASH-7_C	PF14746.1	gi|557693605|ref|YP_008796659.1|	-	0.19	11.2	0.2	2.3	7.7	0.0	2.1	2	0	0	2	2	2	0	WASH	complex	subunit	7,	C-terminal
DUF996	PF06195.8	gi|557693606|ref|YP_008796660.1|	-	4.3e-29	101.2	22.0	4.3e-29	101.2	15.3	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF996)
Yip1	PF04893.12	gi|557693606|ref|YP_008796660.1|	-	0.044	13.2	33.5	0.074	12.5	23.2	1.4	1	1	0	1	1	1	0	Yip1	domain
DUF962	PF06127.6	gi|557693606|ref|YP_008796660.1|	-	0.79	9.6	10.1	0.67	9.8	0.8	2.8	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF962)
Cytochrom_B_N	PF00033.14	gi|557693606|ref|YP_008796660.1|	-	1.5	8.1	17.1	7.8	5.8	8.3	2.6	2	1	0	2	2	2	0	Cytochrome	b(N-terminal)/b6/petB
DUF973	PF06157.6	gi|557693606|ref|YP_008796660.1|	-	7	5.5	32.2	45	2.8	14.5	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF973)
TrmB	PF01978.14	gi|557693607|ref|YP_008796661.1|	-	8.6e-16	57.4	0.3	8.2e-14	51.0	0.0	2.3	1	1	1	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
DUF4423	PF14394.1	gi|557693607|ref|YP_008796661.1|	-	0.0056	16.2	0.0	0.012	15.1	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Ubie_methyltran	PF01209.13	gi|557693608|ref|YP_008796662.1|	-	3.9e-20	71.9	0.0	4.6e-20	71.7	0.0	1.0	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.7	gi|557693608|ref|YP_008796662.1|	-	1.4e-15	57.5	0.0	2e-15	57.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|557693608|ref|YP_008796662.1|	-	4.8e-11	42.6	0.0	6.6e-11	42.1	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557693608|ref|YP_008796662.1|	-	1.7e-09	38.2	0.0	2.8e-09	37.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|557693608|ref|YP_008796662.1|	-	2.2e-08	34.4	0.0	3.3e-08	33.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|557693608|ref|YP_008796662.1|	-	4.5e-08	32.8	0.0	5.9e-08	32.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|557693608|ref|YP_008796662.1|	-	3.4e-07	30.5	0.0	6.2e-07	29.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|557693608|ref|YP_008796662.1|	-	2.6e-05	24.2	0.0	9.7e-05	22.4	0.0	1.9	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_26	PF13659.1	gi|557693608|ref|YP_008796662.1|	-	0.00027	20.9	0.0	0.00043	20.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|557693608|ref|YP_008796662.1|	-	0.0023	17.3	0.0	0.0041	16.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_8	PF05148.10	gi|557693608|ref|YP_008796662.1|	-	0.0045	16.6	0.0	0.0066	16.1	0.0	1.2	1	0	0	1	1	1	1	Hypothetical	methyltransferase
PCMT	PF01135.14	gi|557693608|ref|YP_008796662.1|	-	0.0062	16.0	0.0	0.0095	15.4	0.0	1.4	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
NNMT_PNMT_TEMT	PF01234.12	gi|557693608|ref|YP_008796662.1|	-	0.0087	15.0	0.0	1.4	7.8	0.0	2.2	1	1	0	2	2	2	1	NNMT/PNMT/TEMT	family
RrnaAD	PF00398.15	gi|557693608|ref|YP_008796662.1|	-	0.064	12.2	0.0	0.092	11.7	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
MetW	PF07021.7	gi|557693608|ref|YP_008796662.1|	-	0.091	12.1	0.0	0.16	11.3	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
V4R	PF02830.13	gi|557693609|ref|YP_008796663.1|	-	3.3e-06	26.8	3.6	5.9e-06	26.0	2.5	1.4	1	0	0	1	1	1	1	V4R	domain
UbiA	PF01040.13	gi|557693610|ref|YP_008796664.1|	-	3.5e-26	91.9	30.8	5.8e-26	91.2	21.4	1.3	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF1077	PF06417.7	gi|557693611|ref|YP_008796665.1|	-	0.0032	16.8	0.0	0.008	15.5	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1077)
Presenilin	PF01080.12	gi|557693612|ref|YP_008796666.1|	-	2.3e-07	30.0	27.0	7.5e-05	21.7	3.2	2.4	1	1	1	2	2	2	2	Presenilin
DUF1119	PF06550.6	gi|557693612|ref|YP_008796666.1|	-	2.9e-06	26.6	12.8	2.9e-06	26.6	8.9	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1119)
DUF3488	PF11992.3	gi|557693612|ref|YP_008796666.1|	-	2.2	6.8	12.6	3.4	6.2	8.7	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3488)
CitG	PF01874.11	gi|557693613|ref|YP_008796667.1|	-	2.2e-54	184.5	0.1	2.6e-54	184.2	0.1	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
HTH_Tnp_Mu_2	PF09039.6	gi|557693613|ref|YP_008796667.1|	-	0.015	14.9	0.1	0.028	14.1	0.1	1.4	1	0	0	1	1	1	0	Mu	DNA	binding,	I	gamma	subdomain
DUF4295	PF14128.1	gi|557693613|ref|YP_008796667.1|	-	0.12	11.9	0.3	12	5.6	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4295)
Ni_hydr_CYTB	PF01292.15	gi|557693614|ref|YP_008796668.1|	-	0.076	12.3	3.8	0.035	13.4	1.2	1.5	1	1	0	1	1	1	0	Prokaryotic	cytochrome	b561
5TM-5TMR_LYT	PF07694.7	gi|557693614|ref|YP_008796668.1|	-	0.14	11.4	6.7	0.18	11.1	4.6	1.1	1	0	0	1	1	1	0	5TMR	of	5TMR-LYT
UPF0233	PF06781.7	gi|557693614|ref|YP_008796668.1|	-	0.95	9.1	4.2	1.8	8.2	2.9	1.8	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0233)
DUF1129	PF06570.6	gi|557693614|ref|YP_008796668.1|	-	2.2	7.5	6.9	2.6	7.2	4.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
HTH_5	PF01022.15	gi|557693615|ref|YP_008796669.1|	-	4.1e-12	45.5	0.3	7.6e-12	44.7	0.0	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|557693615|ref|YP_008796669.1|	-	2e-05	24.2	0.0	3.2e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|557693615|ref|YP_008796669.1|	-	3.3e-05	23.6	0.3	5.1e-05	23.0	0.1	1.4	2	0	0	2	2	2	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|557693615|ref|YP_008796669.1|	-	3.6e-05	23.3	0.0	6.8e-05	22.4	0.0	1.4	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|557693615|ref|YP_008796669.1|	-	0.00059	19.1	0.1	0.0011	18.3	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|557693615|ref|YP_008796669.1|	-	0.0056	16.3	0.0	0.0084	15.7	0.0	1.2	1	0	0	1	1	1	1	HTH	domain
Rrf2	PF02082.15	gi|557693615|ref|YP_008796669.1|	-	0.0092	16.0	0.0	0.014	15.4	0.0	1.3	1	1	0	1	1	1	1	Transcriptional	regulator
MarR	PF01047.17	gi|557693615|ref|YP_008796669.1|	-	0.048	13.3	0.0	0.073	12.7	0.0	1.2	1	0	0	1	1	1	0	MarR	family
HxlR	PF01638.12	gi|557693615|ref|YP_008796669.1|	-	0.058	13.0	0.0	0.079	12.5	0.0	1.2	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_29	PF13551.1	gi|557693615|ref|YP_008796669.1|	-	0.073	13.2	0.0	0.11	12.7	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
MarR_2	PF12802.2	gi|557693615|ref|YP_008796669.1|	-	0.099	12.3	0.0	0.19	11.4	0.0	1.4	1	0	0	1	1	1	0	MarR	family
RuvB_C	PF05491.8	gi|557693615|ref|YP_008796669.1|	-	0.12	11.9	0.1	0.25	11.0	0.0	1.5	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
Cyclase	PF04199.8	gi|557693616|ref|YP_008796670.1|	-	2.4e-40	138.0	0.0	3.2e-40	137.6	0.0	1.2	1	0	0	1	1	1	1	Putative	cyclase
CoA_transf_3	PF02515.12	gi|557693617|ref|YP_008796671.1|	-	1.3e-60	203.9	0.0	1.7e-60	203.5	0.0	1.1	1	0	0	1	1	1	1	CoA-transferase	family	III
ECH	PF00378.15	gi|557693618|ref|YP_008796672.1|	-	1.1e-55	188.4	0.0	1.4e-55	188.0	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
ECH_C	PF13766.1	gi|557693618|ref|YP_008796672.1|	-	0.00032	20.8	0.0	0.00058	19.9	0.0	1.4	1	0	0	1	1	1	1	2-enoyl-CoA	Hydratase	C-terminal	region
ICE2	PF08426.5	gi|557693618|ref|YP_008796672.1|	-	0.066	11.8	0.0	0.085	11.4	0.0	1.1	1	0	0	1	1	1	0	ICE2
DUF655	PF04919.7	gi|557693619|ref|YP_008796673.1|	-	3.9e-48	163.5	0.6	4.4e-48	163.3	0.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|557693619|ref|YP_008796673.1|	-	0.00071	19.5	0.0	0.0024	17.8	0.0	1.8	1	1	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_3	PF12836.2	gi|557693619|ref|YP_008796673.1|	-	0.033	14.1	0.0	0.085	12.8	0.0	1.6	1	1	0	1	1	1	0	Helix-hairpin-helix	motif
XPC-binding	PF09280.6	gi|557693619|ref|YP_008796673.1|	-	0.048	13.1	0.0	0.13	11.6	0.0	1.7	1	0	0	1	1	1	0	XPC-binding	domain
RNA_pol_Rpb4	PF03874.11	gi|557693620|ref|YP_008796674.1|	-	1.6e-11	44.2	0.2	1.9e-11	43.9	0.2	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
Rabaptin	PF03528.10	gi|557693620|ref|YP_008796674.1|	-	0.013	15.4	0.2	0.019	14.8	0.2	1.3	1	1	0	1	1	1	0	Rabaptin
FtsK_SpoIIIE	PF01580.13	gi|557693620|ref|YP_008796674.1|	-	0.018	14.5	0.2	0.023	14.1	0.1	1.0	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Ribosomal_L21e	PF01157.13	gi|557693621|ref|YP_008796675.1|	-	9.6e-20	70.2	0.3	1.1e-19	69.9	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
THUMP	PF02926.12	gi|557693622|ref|YP_008796676.1|	-	2.9e-08	33.7	2.4	3.5e-08	33.4	0.2	2.1	3	0	0	3	3	3	1	THUMP	domain
SRP54	PF00448.17	gi|557693623|ref|YP_008796677.1|	-	1.1e-71	240.3	0.0	1.5e-71	239.8	0.0	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|557693623|ref|YP_008796677.1|	-	1.7e-29	102.1	0.0	4.7e-29	100.6	0.0	1.8	1	0	0	1	1	1	1	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|557693623|ref|YP_008796677.1|	-	1.3e-13	50.8	2.0	1.5e-13	50.6	0.2	2.1	2	0	0	2	2	1	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.18	gi|557693623|ref|YP_008796677.1|	-	1e-06	28.2	0.0	3e-06	26.7	0.0	1.8	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MobB	PF03205.9	gi|557693623|ref|YP_008796677.1|	-	2.8e-05	23.8	0.6	6.8e-05	22.6	0.4	1.7	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_22	PF13401.1	gi|557693623|ref|YP_008796677.1|	-	4.8e-05	23.4	0.0	0.00026	21.1	0.0	2.2	2	0	0	2	2	1	1	AAA	domain
AAA_17	PF13207.1	gi|557693623|ref|YP_008796677.1|	-	6.5e-05	23.7	0.4	0.00045	21.0	0.0	2.6	3	1	0	3	3	1	1	AAA	domain
AAA_18	PF13238.1	gi|557693623|ref|YP_008796677.1|	-	8e-05	22.9	0.5	0.0082	16.4	0.2	3.1	2	1	0	2	2	2	1	AAA	domain
cobW	PF02492.14	gi|557693623|ref|YP_008796677.1|	-	0.00013	21.4	1.1	0.002	17.5	0.8	2.3	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.1	gi|557693623|ref|YP_008796677.1|	-	0.00016	21.5	0.0	0.00041	20.2	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|557693623|ref|YP_008796677.1|	-	0.00031	19.9	0.0	0.00067	18.8	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_19	PF13245.1	gi|557693623|ref|YP_008796677.1|	-	0.00055	19.6	0.0	0.0027	17.4	0.0	2.1	2	0	0	2	2	2	1	Part	of	AAA	domain
6PF2K	PF01591.13	gi|557693623|ref|YP_008796677.1|	-	0.0006	18.9	0.0	0.00096	18.2	0.0	1.3	1	0	0	1	1	1	1	6-phosphofructo-2-kinase
ArgK	PF03308.11	gi|557693623|ref|YP_008796677.1|	-	0.0011	17.7	0.5	0.026	13.2	0.1	2.4	2	0	0	2	2	2	1	ArgK	protein
AAA_31	PF13614.1	gi|557693623|ref|YP_008796677.1|	-	0.0019	18.1	0.0	0.078	12.9	0.0	2.8	3	0	0	3	3	2	1	AAA	domain
AAA_28	PF13521.1	gi|557693623|ref|YP_008796677.1|	-	0.0019	18.1	0.7	0.04	13.8	0.2	2.6	2	1	1	3	3	3	1	AAA	domain
AAA_10	PF12846.2	gi|557693623|ref|YP_008796677.1|	-	0.0024	17.3	0.1	0.0046	16.4	0.0	1.5	1	1	0	1	1	1	1	AAA-like	domain
AAA_30	PF13604.1	gi|557693623|ref|YP_008796677.1|	-	0.0036	16.8	1.0	0.061	12.9	0.2	2.6	2	1	0	2	2	2	1	AAA	domain
APS_kinase	PF01583.15	gi|557693623|ref|YP_008796677.1|	-	0.0051	16.4	0.0	0.012	15.2	0.0	1.6	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_24	PF13479.1	gi|557693623|ref|YP_008796677.1|	-	0.011	15.3	0.0	0.027	14.0	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|557693623|ref|YP_008796677.1|	-	0.011	15.8	2.3	0.027	14.6	0.9	2.3	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|557693623|ref|YP_008796677.1|	-	0.026	13.9	4.2	0.27	10.6	0.9	2.8	2	1	0	2	2	2	0	AAA	domain
LpxK	PF02606.9	gi|557693623|ref|YP_008796677.1|	-	0.037	12.9	0.7	0.086	11.7	0.1	1.7	2	0	0	2	2	2	0	Tetraacyldisaccharide-1-P	4'-kinase
NACHT	PF05729.7	gi|557693623|ref|YP_008796677.1|	-	0.039	13.6	0.2	0.1	12.2	0.1	1.9	2	1	0	2	2	1	0	NACHT	domain
IMPDH	PF00478.20	gi|557693623|ref|YP_008796677.1|	-	0.04	12.8	0.8	0.086	11.7	0.1	1.8	3	0	0	3	3	3	0	IMP	dehydrogenase	/	GMP	reductase	domain
KTI12	PF08433.5	gi|557693623|ref|YP_008796677.1|	-	0.043	13.0	0.1	0.11	11.6	0.0	1.7	2	0	0	2	2	1	0	Chromatin	associated	protein	KTI12
MipZ	PF09140.6	gi|557693623|ref|YP_008796677.1|	-	0.043	12.8	0.6	0.79	8.7	0.4	2.4	1	1	0	1	1	1	0	ATPase	MipZ
NTPase_1	PF03266.10	gi|557693623|ref|YP_008796677.1|	-	0.051	13.2	1.2	0.12	12.0	0.1	2.1	2	0	0	2	2	2	0	NTPase
Thymidylate_kin	PF02223.12	gi|557693623|ref|YP_008796677.1|	-	0.054	12.8	0.3	0.16	11.3	0.2	1.8	1	0	0	1	1	1	0	Thymidylate	kinase
AAA_5	PF07728.9	gi|557693623|ref|YP_008796677.1|	-	0.06	13.0	0.5	0.34	10.6	0.2	2.3	2	1	1	3	3	3	0	AAA	domain	(dynein-related	subfamily)
AAA_11	PF13086.1	gi|557693623|ref|YP_008796677.1|	-	0.1	12.1	0.2	2.1	7.8	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|557693623|ref|YP_008796677.1|	-	0.13	12.0	0.0	0.25	11.1	0.0	1.5	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
Epimerase	PF01370.16	gi|557693624|ref|YP_008796678.1|	-	2.6e-48	164.5	0.0	3.2e-48	164.2	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|557693624|ref|YP_008796678.1|	-	3.3e-22	78.7	0.0	3.8e-22	78.5	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|557693624|ref|YP_008796678.1|	-	6.1e-15	54.6	0.0	2.1e-13	49.6	0.0	2.1	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.7	gi|557693624|ref|YP_008796678.1|	-	3.8e-13	48.9	0.1	8.6e-12	44.5	0.0	2.2	2	0	0	2	2	2	1	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|557693624|ref|YP_008796678.1|	-	1.2e-12	47.4	0.0	2.9e-11	42.8	0.0	2.4	3	0	0	3	3	3	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|557693624|ref|YP_008796678.1|	-	3.5e-08	33.6	0.0	5.3e-08	33.0	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
adh_short	PF00106.20	gi|557693624|ref|YP_008796678.1|	-	4.8e-06	26.5	3.2	4.6e-05	23.3	1.7	2.5	2	1	0	2	2	2	1	short	chain	dehydrogenase
KR	PF08659.5	gi|557693624|ref|YP_008796678.1|	-	0.0089	15.7	1.2	0.082	12.5	0.1	2.2	1	1	1	2	2	2	1	KR	domain
Ribonuc_red_2_N	PF08471.5	gi|557693624|ref|YP_008796678.1|	-	0.13	12.3	0.0	0.41	10.7	0.0	1.7	2	0	0	2	2	2	0	Class	II	vitamin	B12-dependent	ribonucleotide	reductase
MOSC_N	PF03476.11	gi|557693625|ref|YP_008796679.1|	-	1.3e-13	50.6	0.0	2.2e-13	49.9	0.0	1.4	1	0	0	1	1	1	1	MOSC	N-terminal	beta	barrel	domain
MOSC	PF03473.12	gi|557693625|ref|YP_008796679.1|	-	7.6e-13	48.0	0.0	1.1e-12	47.5	0.0	1.2	1	0	0	1	1	1	1	MOSC	domain
LAGLIDADG_3	PF14528.1	gi|557693626|ref|YP_008796680.1|	-	3.7e-17	62.3	0.0	3.2e-14	52.9	0.0	2.5	2	0	0	2	2	2	2	LAGLIDADG-like	domain
Hom_end	PF05204.9	gi|557693626|ref|YP_008796680.1|	-	0.0051	16.7	0.0	0.014	15.3	0.0	1.7	2	0	0	2	2	2	1	Homing	endonuclease
Glycos_transf_1	PF00534.15	gi|557693627|ref|YP_008796681.1|	-	1.7e-42	144.7	0.0	2.7e-42	144.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|557693627|ref|YP_008796681.1|	-	3.9e-14	52.9	0.0	7.7e-14	51.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|557693627|ref|YP_008796681.1|	-	6e-09	36.0	0.0	1.2e-08	35.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_20	PF00982.16	gi|557693627|ref|YP_008796681.1|	-	0.00021	19.9	0.0	0.24	9.8	0.0	2.6	2	1	0	2	2	2	2	Glycosyltransferase	family	20
HycA_repressor	PF11046.3	gi|557693627|ref|YP_008796681.1|	-	0.11	12.4	0.0	0.21	11.5	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	repressor	of	hyc	and	hyp	operons
AAA_24	PF13479.1	gi|557693627|ref|YP_008796681.1|	-	0.15	11.6	0.0	14	5.1	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
MS_channel	PF00924.13	gi|557693628|ref|YP_008796682.1|	-	3e-22	78.9	0.0	3e-22	78.9	0.0	1.4	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Peptidase_M24	PF00557.19	gi|557693629|ref|YP_008796683.1|	-	8.4e-38	130.0	0.1	1.1e-37	129.6	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
TFIIS_C	PF01096.13	gi|557693630|ref|YP_008796684.1|	-	0.0012	18.3	1.1	0.96	9.1	0.1	2.1	2	0	0	2	2	2	2	Transcription	factor	S-II	(TFIIS)
TF_Zn_Ribbon	PF08271.7	gi|557693630|ref|YP_008796684.1|	-	0.0039	16.4	2.5	0.63	9.4	0.1	2.3	2	0	0	2	2	2	2	TFIIB	zinc-binding
zf-FPG_IleRS	PF06827.9	gi|557693630|ref|YP_008796684.1|	-	0.0093	15.5	2.8	0.064	12.9	0.3	2.2	2	0	0	2	2	2	1	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_2	PF13240.1	gi|557693630|ref|YP_008796684.1|	-	0.016	14.7	3.4	0.99	8.9	0.3	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|557693630|ref|YP_008796684.1|	-	0.017	14.2	5.6	0.1	11.8	3.9	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|557693630|ref|YP_008796684.1|	-	0.02	14.6	0.3	1.1	9.1	0.0	2.1	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-tcix	PF14952.1	gi|557693630|ref|YP_008796684.1|	-	0.061	12.6	3.9	1.5	8.1	0.9	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Zn-ribbon_8	PF09723.5	gi|557693630|ref|YP_008796684.1|	-	0.078	12.9	3.3	0.92	9.5	2.3	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
DnaJ_CXXCXGXG	PF00684.14	gi|557693630|ref|YP_008796684.1|	-	0.078	13.0	0.0	0.1	12.6	0.0	1.2	1	0	0	1	1	1	0	DnaJ	central	domain
zf-IS66	PF13005.2	gi|557693630|ref|YP_008796684.1|	-	0.081	12.9	1.1	0.19	11.6	0.1	1.9	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
DUF2752	PF10825.3	gi|557693630|ref|YP_008796684.1|	-	0.081	12.9	0.4	0.5	10.4	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2752)
HypA	PF01155.14	gi|557693630|ref|YP_008796684.1|	-	0.1	12.3	0.1	0.13	11.9	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-ISL3	PF14690.1	gi|557693630|ref|YP_008796684.1|	-	0.12	12.3	1.7	1.3	9.1	0.3	2.1	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
OrfB_Zn_ribbon	PF07282.6	gi|557693630|ref|YP_008796684.1|	-	0.87	9.2	3.0	7	6.3	1.9	2.0	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-CCHC	PF00098.18	gi|557693630|ref|YP_008796684.1|	-	1.4	8.9	6.1	9	6.4	0.8	2.2	2	0	0	2	2	2	0	Zinc	knuckle
PhnA_Zn_Ribbon	PF08274.7	gi|557693630|ref|YP_008796684.1|	-	1.4	8.7	3.6	12	5.7	0.3	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-C4_Topoisom	PF01396.14	gi|557693630|ref|YP_008796684.1|	-	4	7.0	5.9	0.65	9.5	1.2	1.8	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
DUF1512	PF07431.7	gi|557693631|ref|YP_008796685.1|	-	2.8e-117	391.4	5.2	3.3e-117	391.2	3.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
CK2S	PF15011.1	gi|557693631|ref|YP_008796685.1|	-	0.006	16.3	0.5	5.4	6.7	0.0	3.0	3	0	0	3	3	3	2	Casein	Kinase	2	substrate
HU-DNA_bdg	PF14848.1	gi|557693631|ref|YP_008796685.1|	-	0.049	13.3	3.0	0.84	9.3	0.0	2.8	3	0	0	3	3	3	0	DNA-binding	domain
Topoisom_bac	PF01131.15	gi|557693632|ref|YP_008796686.1|	-	1.1e-95	320.8	0.0	1.5e-95	320.4	0.0	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|557693632|ref|YP_008796686.1|	-	1.3e-11	44.3	0.0	3.1e-11	43.1	0.0	1.7	1	0	0	1	1	1	1	Toprim	domain
Exonuc_VII_S	PF02609.11	gi|557693632|ref|YP_008796686.1|	-	0.048	13.4	0.9	0.17	11.6	0.6	2.0	1	0	0	1	1	1	0	Exonuclease	VII	small	subunit
Complex1_LYR_1	PF13232.1	gi|557693632|ref|YP_008796686.1|	-	0.059	13.5	0.3	0.2	11.8	0.2	1.9	1	0	0	1	1	1	0	Complex1_LYR-like
adh_short_C2	PF13561.1	gi|557693634|ref|YP_008796688.1|	-	2.1e-32	112.7	0.0	2.6e-32	112.5	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|557693634|ref|YP_008796688.1|	-	1.2e-29	103.3	0.1	1.6e-29	102.9	0.1	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|557693634|ref|YP_008796688.1|	-	2.7e-09	36.9	0.1	3.6e-09	36.5	0.0	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|557693634|ref|YP_008796688.1|	-	2e-06	27.4	0.0	1.3e-05	24.7	0.0	2.0	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3HCDH_N	PF02737.13	gi|557693634|ref|YP_008796688.1|	-	0.011	15.3	0.1	0.016	14.8	0.1	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Eno-Rase_NADH_b	PF12242.3	gi|557693634|ref|YP_008796688.1|	-	0.019	14.7	0.1	0.04	13.6	0.1	1.5	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
Polysacc_synt_2	PF02719.10	gi|557693634|ref|YP_008796688.1|	-	0.1	11.5	0.0	0.14	11.0	0.0	1.2	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
DNA_binding_1	PF01035.15	gi|557693635|ref|YP_008796689.1|	-	2.7e-29	100.7	0.0	4.1e-29	100.1	0.0	1.3	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
Rdx	PF10262.4	gi|557693636|ref|YP_008796690.1|	-	5.7e-18	64.7	0.0	6.3e-18	64.5	0.0	1.0	1	0	0	1	1	1	1	Rdx	family
DUF3994	PF13159.1	gi|557693636|ref|YP_008796690.1|	-	0.12	12.6	0.0	0.18	12.0	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3994)
PQQ	PF01011.16	gi|557693637|ref|YP_008796691.1|	-	4.3e-29	98.5	0.1	1.8e-06	27.1	0.0	7.5	7	1	0	7	7	7	5	PQQ	enzyme	repeat
PQQ_2	PF13360.1	gi|557693637|ref|YP_008796691.1|	-	3.3e-21	75.8	0.1	6.1e-07	29.1	0.0	3.6	3	1	0	3	3	3	3	PQQ-like	domain
PQQ_3	PF13570.1	gi|557693637|ref|YP_008796691.1|	-	2.5e-06	27.5	13.1	0.006	16.8	0.1	6.7	8	1	0	8	8	8	2	PQQ-like	domain
COX2	PF00116.15	gi|557693638|ref|YP_008796692.1|	-	0.00071	19.3	0.2	0.00071	19.3	0.1	1.9	2	0	0	2	2	2	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
ABC_tran	PF00005.22	gi|557693640|ref|YP_008796694.1|	-	1.8e-33	115.7	0.0	4.1e-33	114.5	0.0	1.6	2	0	0	2	2	1	1	ABC	transporter
TOBE_2	PF08402.5	gi|557693640|ref|YP_008796694.1|	-	4.1e-09	36.3	0.3	2.4e-08	33.8	0.0	2.4	3	0	0	3	3	3	1	TOBE	domain
AAA_21	PF13304.1	gi|557693640|ref|YP_008796694.1|	-	1.4e-07	31.8	0.0	0.00042	20.3	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
TOBE	PF03459.12	gi|557693640|ref|YP_008796694.1|	-	0.00024	21.1	0.2	0.00086	19.3	0.0	2.1	2	0	0	2	2	2	1	TOBE	domain
AAA_15	PF13175.1	gi|557693640|ref|YP_008796694.1|	-	0.002	17.2	0.0	0.014	14.4	0.0	2.0	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_16	PF13191.1	gi|557693640|ref|YP_008796694.1|	-	0.003	17.5	0.1	0.0068	16.4	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557693640|ref|YP_008796694.1|	-	0.0039	17.3	0.4	0.011	15.8	0.3	1.9	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|557693640|ref|YP_008796694.1|	-	0.0055	16.9	0.1	0.015	15.5	0.1	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|557693640|ref|YP_008796694.1|	-	0.0095	14.6	0.0	0.013	14.1	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
DUF258	PF03193.11	gi|557693640|ref|YP_008796694.1|	-	0.012	14.8	0.0	0.023	13.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|557693640|ref|YP_008796694.1|	-	0.036	13.5	0.0	0.076	12.5	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
IstB_IS21	PF01695.12	gi|557693640|ref|YP_008796694.1|	-	0.054	12.9	0.0	0.09	12.1	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|557693640|ref|YP_008796694.1|	-	0.059	13.1	0.0	0.17	11.6	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
SbcCD_C	PF13558.1	gi|557693640|ref|YP_008796694.1|	-	0.075	12.9	0.1	0.36	10.7	0.1	2.0	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
NMT1	PF09084.6	gi|557693641|ref|YP_008796695.1|	-	7.9e-09	35.4	0.0	3.5e-08	33.3	0.0	2.1	1	1	0	1	1	1	1	NMT1/THI5	like
SBP_bac_3	PF00497.15	gi|557693641|ref|YP_008796695.1|	-	1.9e-06	27.3	0.0	5e-06	25.9	0.0	1.9	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
Phosphonate-bd	PF12974.2	gi|557693641|ref|YP_008796695.1|	-	5.2e-06	26.0	0.0	1.9e-05	24.2	0.0	1.7	1	1	0	2	2	2	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
NMT1_2	PF13379.1	gi|557693641|ref|YP_008796695.1|	-	0.018	14.3	0.0	0.74	9.1	0.0	2.3	2	0	0	2	2	2	0	NMT1-like	family
DUF592	PF04574.8	gi|557693641|ref|YP_008796695.1|	-	0.041	13.4	0.0	0.068	12.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF592)
BPD_transp_1	PF00528.17	gi|557693642|ref|YP_008796696.1|	-	1.6e-16	60.3	47.8	1.9e-10	40.5	9.4	3.1	2	2	1	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_6	PF13343.1	gi|557693643|ref|YP_008796697.1|	-	3.4e-27	95.3	0.1	5.1e-27	94.7	0.1	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|557693643|ref|YP_008796697.1|	-	4.8e-19	69.1	0.2	1.9e-18	67.2	0.0	1.9	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.1	gi|557693643|ref|YP_008796697.1|	-	3.2e-16	59.6	0.1	6.2e-16	58.7	0.1	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|557693643|ref|YP_008796697.1|	-	4.5e-10	39.7	0.3	6.3e-06	26.1	0.1	2.4	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	protein
MarR_2	PF12802.2	gi|557693644|ref|YP_008796698.1|	-	9.6e-08	31.5	0.0	3.3e-07	29.8	0.0	1.9	2	0	0	2	2	2	1	MarR	family
HTH_20	PF12840.2	gi|557693644|ref|YP_008796698.1|	-	5.5e-07	29.3	0.0	2.1e-06	27.4	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|557693644|ref|YP_008796698.1|	-	2.3e-06	26.9	0.0	5.9e-06	25.5	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|557693644|ref|YP_008796698.1|	-	0.00044	19.8	0.1	0.0014	18.2	0.0	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|557693644|ref|YP_008796698.1|	-	0.0019	17.8	0.1	0.0049	16.5	0.0	1.7	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|557693644|ref|YP_008796698.1|	-	0.0023	18.2	0.0	0.0068	16.7	0.0	1.8	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
B-block_TFIIIC	PF04182.7	gi|557693644|ref|YP_008796698.1|	-	0.0041	16.9	0.3	0.028	14.2	0.1	2.2	2	0	0	2	2	2	1	B-block	binding	subunit	of	TFIIIC
HTH_IclR	PF09339.5	gi|557693644|ref|YP_008796698.1|	-	0.0059	16.1	0.0	0.011	15.3	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|557693644|ref|YP_008796698.1|	-	0.0077	16.0	0.0	0.023	14.4	0.0	1.8	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR	PF01047.17	gi|557693644|ref|YP_008796698.1|	-	0.013	15.2	0.0	0.03	14.0	0.0	1.6	1	0	0	1	1	1	0	MarR	family
HTH_11	PF08279.7	gi|557693644|ref|YP_008796698.1|	-	0.023	14.3	0.0	0.04	13.5	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
RP-C	PF03428.8	gi|557693644|ref|YP_008796698.1|	-	0.023	14.1	0.1	1.1	8.7	0.0	2.3	2	0	0	2	2	2	0	Replication	protein	C	N-terminal	domain
Rrf2	PF02082.15	gi|557693644|ref|YP_008796698.1|	-	0.031	14.4	0.0	0.1	12.7	0.0	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_CodY	PF08222.6	gi|557693644|ref|YP_008796698.1|	-	0.12	11.6	0.0	0.23	10.8	0.0	1.5	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
TENA_THI-4	PF03070.11	gi|557693645|ref|YP_008796699.1|	-	2.2e-28	99.4	0.0	2.5e-28	99.2	0.0	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Phage_int_SAM_1	PF02899.12	gi|557693645|ref|YP_008796699.1|	-	0.083	13.0	0.0	0.49	10.5	0.0	2.2	1	1	0	1	1	1	0	Phage	integrase,	N-terminal	SAM-like	domain
NADH-u_ox-rdase	PF10785.4	gi|557693646|ref|YP_008796700.1|	-	2.3	8.5	5.1	0.65	10.2	0.2	2.5	3	1	1	4	4	4	0	NADH-ubiquinone	oxidoreductase	complex	I,	21	kDa	subunit
DUF1129	PF06570.6	gi|557693646|ref|YP_008796700.1|	-	7.7	5.7	7.8	0.22	10.7	0.5	2.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1129)
Cupredoxin_1	PF13473.1	gi|557693647|ref|YP_008796701.1|	-	6.8e-05	22.7	0.0	0.0067	16.3	0.0	2.2	1	1	0	1	1	1	1	Cupredoxin-like	domain
COX2	PF00116.15	gi|557693647|ref|YP_008796701.1|	-	0.074	12.8	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
NVEALA	PF14055.1	gi|557693647|ref|YP_008796701.1|	-	0.11	12.2	0.2	0.18	11.5	0.1	1.3	1	0	0	1	1	1	0	NVEALA	protein
ABC_tran	PF00005.22	gi|557693648|ref|YP_008796702.1|	-	1.2e-36	126.0	0.0	2.2e-36	125.1	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557693648|ref|YP_008796702.1|	-	3e-13	50.3	0.3	3.1e-07	30.6	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|557693648|ref|YP_008796702.1|	-	2.3e-06	26.9	0.0	0.0051	15.9	0.0	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
TOBE_2	PF08402.5	gi|557693648|ref|YP_008796702.1|	-	3.3e-06	26.9	0.5	1.5e-05	24.9	0.3	2.1	2	0	0	2	2	2	1	TOBE	domain
AAA_16	PF13191.1	gi|557693648|ref|YP_008796702.1|	-	5.1e-05	23.3	0.0	0.00012	22.1	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|557693648|ref|YP_008796702.1|	-	0.00034	20.0	0.0	0.00078	18.9	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|557693648|ref|YP_008796702.1|	-	0.0004	19.6	0.1	0.0051	16.0	0.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|557693648|ref|YP_008796702.1|	-	0.00043	20.0	0.0	0.00081	19.1	0.0	1.5	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_23	PF13476.1	gi|557693648|ref|YP_008796702.1|	-	0.0007	19.9	3.3	0.0043	17.3	2.3	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557693648|ref|YP_008796702.1|	-	0.0018	17.9	0.1	0.0079	15.9	0.0	2.0	2	0	0	2	2	2	1	Part	of	AAA	domain
Rad17	PF03215.10	gi|557693648|ref|YP_008796702.1|	-	0.002	16.8	0.0	0.0028	16.4	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_18	PF13238.1	gi|557693648|ref|YP_008796702.1|	-	0.0072	16.6	0.2	0.026	14.8	0.0	1.9	1	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|557693648|ref|YP_008796702.1|	-	0.011	15.8	0.1	0.033	14.3	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|557693648|ref|YP_008796702.1|	-	0.015	15.5	0.0	0.043	14.0	0.0	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|557693648|ref|YP_008796702.1|	-	0.022	15.5	0.5	0.066	14.0	0.3	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|557693648|ref|YP_008796702.1|	-	0.044	13.1	0.0	0.22	10.8	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|557693648|ref|YP_008796702.1|	-	0.051	12.7	0.0	0.091	11.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Miro	PF08477.8	gi|557693648|ref|YP_008796702.1|	-	0.055	13.9	0.0	0.22	11.9	0.0	2.0	3	0	0	3	3	1	0	Miro-like	protein
AAA_14	PF13173.1	gi|557693648|ref|YP_008796702.1|	-	0.062	13.2	0.0	0.13	12.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|557693648|ref|YP_008796702.1|	-	0.098	12.5	0.0	0.35	10.8	0.0	2.0	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_10	PF12846.2	gi|557693648|ref|YP_008796702.1|	-	0.14	11.6	0.1	0.57	9.5	0.0	1.9	2	0	0	2	2	2	0	AAA-like	domain
TOBE	PF03459.12	gi|557693648|ref|YP_008796702.1|	-	0.19	11.8	3.3	0.49	10.5	0.3	2.4	2	0	0	2	2	2	0	TOBE	domain
BPD_transp_1	PF00528.17	gi|557693649|ref|YP_008796703.1|	-	3.8e-05	23.2	20.8	0.00014	21.4	14.4	2.2	1	1	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|557693650|ref|YP_008796704.1|	-	1.7e-16	60.2	18.1	1.7e-16	60.2	12.6	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
Kelch_1	PF01344.20	gi|557693651|ref|YP_008796705.1|	-	8.4e-54	178.9	0.1	6.1e-11	41.6	0.0	6.2	6	0	0	6	6	6	6	Kelch	motif
Kelch_6	PF13964.1	gi|557693651|ref|YP_008796705.1|	-	5.7e-38	127.5	0.1	3.2e-08	33.4	0.0	6.3	4	2	3	7	7	7	5	Kelch	motif
Kelch_3	PF13415.1	gi|557693651|ref|YP_008796705.1|	-	5.6e-28	96.4	0.0	3.7e-05	23.7	0.0	5.8	5	0	0	5	5	5	5	Galactose	oxidase,	central	domain
Kelch_4	PF13418.1	gi|557693651|ref|YP_008796705.1|	-	2.5e-24	84.7	0.0	2.2e-06	27.3	0.0	5.8	5	1	0	5	5	5	5	Galactose	oxidase,	central	domain
Kelch_2	PF07646.10	gi|557693651|ref|YP_008796705.1|	-	2.9e-24	83.8	0.0	0.00026	20.6	0.0	6.1	6	0	0	6	6	6	4	Kelch	motif
Kelch_5	PF13854.1	gi|557693651|ref|YP_008796705.1|	-	4.8e-15	55.1	2.1	0.011	15.6	0.0	6.6	7	0	0	7	7	7	4	Kelch	motif
PQQ_3	PF13570.1	gi|557693651|ref|YP_008796705.1|	-	0.013	15.7	1.6	1.2	9.5	0.0	4.3	5	0	0	5	5	5	0	PQQ-like	domain
DUF1156	PF06634.7	gi|557693651|ref|YP_008796705.1|	-	0.034	13.9	0.0	10	5.9	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1156)
DUF3239	PF11580.3	gi|557693651|ref|YP_008796705.1|	-	0.085	12.8	2.0	2.7	8.0	0.0	3.1	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3239)
DUF1206	PF06724.6	gi|557693652|ref|YP_008796706.1|	-	5.2	6.9	10.7	14	5.5	0.6	3.1	2	1	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1206)
DUF202	PF02656.10	gi|557693652|ref|YP_008796706.1|	-	5.5	7.2	6.3	40	4.5	4.4	2.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
PQQ	PF01011.16	gi|557693653|ref|YP_008796707.1|	-	1.1e-24	84.6	22.9	1.3e-05	24.4	0.1	7.8	8	0	0	8	8	8	5	PQQ	enzyme	repeat
PQQ_2	PF13360.1	gi|557693653|ref|YP_008796707.1|	-	4.7e-18	65.5	4.1	1.5e-05	24.6	0.1	4.0	3	1	0	3	3	3	3	PQQ-like	domain
PQQ_3	PF13570.1	gi|557693653|ref|YP_008796707.1|	-	6.6e-13	48.4	13.5	5.6e-05	23.2	0.3	7.6	7	0	0	7	7	7	2	PQQ-like	domain
SlyX	PF04102.7	gi|557693653|ref|YP_008796707.1|	-	1.2	9.5	3.7	2.9	8.3	2.6	1.5	1	0	0	1	1	1	0	SlyX
adh_short	PF00106.20	gi|557693654|ref|YP_008796708.1|	-	6.8e-31	107.4	0.1	9.5e-31	106.9	0.1	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|557693654|ref|YP_008796708.1|	-	1e-15	58.1	0.0	1.4e-15	57.7	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|557693654|ref|YP_008796708.1|	-	6.1e-11	42.3	0.1	8.6e-11	41.8	0.1	1.1	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|557693654|ref|YP_008796708.1|	-	2.8e-06	27.4	0.0	4.7e-06	26.7	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
Eno-Rase_NADH_b	PF12242.3	gi|557693654|ref|YP_008796708.1|	-	2.3e-05	24.0	0.1	9.3e-05	22.1	0.1	1.9	2	0	0	2	2	2	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
Epimerase	PF01370.16	gi|557693654|ref|YP_008796708.1|	-	0.00056	19.4	0.0	0.0008	18.9	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
DUF1776	PF08643.5	gi|557693654|ref|YP_008796708.1|	-	0.00083	18.5	0.0	0.0025	16.9	0.0	1.7	1	1	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Saccharop_dh	PF03435.13	gi|557693654|ref|YP_008796708.1|	-	0.0081	15.1	0.1	0.013	14.5	0.1	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
Dicty_REP	PF05086.7	gi|557693655|ref|YP_008796709.1|	-	0.88	7.2	5.1	0.92	7.1	3.5	1.1	1	0	0	1	1	1	0	Dictyostelium	(Slime	Mold)	REP	protein
Shisa	PF13908.1	gi|557693655|ref|YP_008796709.1|	-	1.1	9.3	7.1	1.3	9.2	4.0	1.6	2	0	0	2	2	2	0	Wnt	and	FGF	inhibitory	regulator
COX2_TM	PF02790.10	gi|557693657|ref|YP_008796711.1|	-	4.5	7.2	6.7	5.5	7.0	3.1	2.2	2	0	0	2	2	2	0	Cytochrome	C	oxidase	subunit	II,	transmembrane	domain
SBP_bac_1	PF01547.20	gi|557693658|ref|YP_008796712.1|	-	5.6e-17	62.4	3.2	9.8e-17	61.6	2.2	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|557693658|ref|YP_008796712.1|	-	7.6e-12	45.5	0.2	2.6e-11	43.8	0.0	1.7	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	protein
CytB6-F_Fe-S	PF08802.5	gi|557693658|ref|YP_008796712.1|	-	3.2	7.8	5.7	0.4	10.7	0.6	2.1	2	0	0	2	2	2	0	Cytochrome	B6-F	complex	Fe-S	subunit
G5	PF07501.7	gi|557693659|ref|YP_008796713.1|	-	0.051	13.5	0.0	0.11	12.4	0.0	1.5	1	0	0	1	1	1	0	G5	domain
MFS_1	PF07690.11	gi|557693660|ref|YP_008796714.1|	-	3.7e-40	137.7	38.7	3.7e-40	137.7	26.8	2.4	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
PUCC	PF03209.10	gi|557693660|ref|YP_008796714.1|	-	0.017	13.9	20.1	0.0053	15.5	4.9	2.4	2	0	0	2	2	2	0	PUCC	protein
OATP	PF03137.15	gi|557693660|ref|YP_008796714.1|	-	0.16	10.0	9.6	0.1	10.6	0.6	2.7	2	2	1	3	3	3	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
DUF423	PF04241.10	gi|557693660|ref|YP_008796714.1|	-	0.4	10.6	8.7	1.5	8.7	0.6	3.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF423)
PQQ_2	PF13360.1	gi|557693661|ref|YP_008796715.1|	-	7e-26	91.1	0.4	2.4e-10	40.3	0.0	3.5	3	1	0	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|557693661|ref|YP_008796715.1|	-	3.3e-24	83.1	6.4	0.00018	20.8	0.0	7.6	7	0	0	7	7	7	6	PQQ	enzyme	repeat
PQQ_3	PF13570.1	gi|557693661|ref|YP_008796715.1|	-	1.7e-20	72.5	10.2	3.3e-08	33.5	0.1	7.5	7	1	0	7	7	7	5	PQQ-like	domain
DUF4105	PF13387.1	gi|557693661|ref|YP_008796715.1|	-	0.027	13.6	0.0	0.044	12.9	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4105)
ABC_tran	PF00005.22	gi|557693662|ref|YP_008796716.1|	-	1e-28	100.3	0.0	2e-28	99.4	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557693662|ref|YP_008796716.1|	-	1.6e-13	51.2	1.0	8.7e-07	29.1	0.0	2.2	1	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|557693662|ref|YP_008796716.1|	-	0.00011	21.3	0.0	0.062	12.3	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|557693662|ref|YP_008796716.1|	-	0.00031	21.1	0.8	0.00059	20.2	0.6	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557693662|ref|YP_008796716.1|	-	0.0023	17.4	0.0	0.0049	16.3	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|557693662|ref|YP_008796716.1|	-	0.0027	17.7	0.0	0.0058	16.6	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|557693662|ref|YP_008796716.1|	-	0.0082	16.0	0.0	0.09	12.6	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
AAA	PF00004.24	gi|557693662|ref|YP_008796716.1|	-	0.013	15.6	0.2	0.1	12.7	0.1	2.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.12	gi|557693662|ref|YP_008796716.1|	-	0.02	14.3	0.1	0.23	10.8	0.0	2.4	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_10	PF12846.2	gi|557693662|ref|YP_008796716.1|	-	0.029	13.8	0.5	0.17	11.3	0.1	2.0	1	1	1	2	2	2	0	AAA-like	domain
Arch_ATPase	PF01637.13	gi|557693662|ref|YP_008796716.1|	-	0.036	13.7	0.1	0.26	10.9	0.0	2.1	2	0	0	2	2	2	0	Archaeal	ATPase
AAA_22	PF13401.1	gi|557693662|ref|YP_008796716.1|	-	0.05	13.7	1.2	0.22	11.6	0.4	2.6	2	1	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|557693662|ref|YP_008796716.1|	-	0.069	13.9	0.5	5.7	7.7	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|557693662|ref|YP_008796716.1|	-	0.078	12.7	0.2	0.22	11.3	0.1	1.8	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF258	PF03193.11	gi|557693662|ref|YP_008796716.1|	-	0.08	12.1	0.0	0.16	11.1	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|557693662|ref|YP_008796716.1|	-	0.14	11.3	0.4	0.66	9.1	0.0	2.1	2	1	1	3	3	3	0	RecF/RecN/SMC	N	terminal	domain
AAA_24	PF13479.1	gi|557693662|ref|YP_008796716.1|	-	0.15	11.6	1.1	0.33	10.5	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
ABC2_membrane_2	PF12679.2	gi|557693663|ref|YP_008796717.1|	-	3.2e-19	68.8	29.6	8.2e-19	67.5	20.5	1.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|557693663|ref|YP_008796717.1|	-	7.3e-13	48.2	37.3	7.3e-13	48.2	25.9	1.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|557693663|ref|YP_008796717.1|	-	1e-08	34.5	32.6	1e-08	34.5	22.6	1.5	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|557693663|ref|YP_008796717.1|	-	0.00025	20.2	25.4	0.00025	20.2	17.6	1.9	2	1	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_5	PF13346.1	gi|557693663|ref|YP_008796717.1|	-	8	5.6	33.2	0.32	10.2	18.0	2.2	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
PQQ_2	PF13360.1	gi|557693664|ref|YP_008796718.1|	-	3.5e-19	69.2	0.0	9.5e-07	28.5	0.0	3.4	3	0	0	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|557693664|ref|YP_008796718.1|	-	4.8e-19	66.8	0.5	2.1e-06	26.9	0.0	6.3	6	0	0	6	6	6	3	PQQ	enzyme	repeat
PQQ_3	PF13570.1	gi|557693664|ref|YP_008796718.1|	-	1e-06	28.7	6.8	0.011	16.0	0.4	5.4	5	0	0	5	5	5	3	PQQ-like	domain
Cupredoxin_1	PF13473.1	gi|557693665|ref|YP_008796719.1|	-	7.5e-09	35.4	0.0	8.4e-09	35.2	0.0	1.1	1	0	0	1	1	1	1	Cupredoxin-like	domain
Copper-bind	PF00127.15	gi|557693665|ref|YP_008796719.1|	-	0.0012	19.0	0.0	0.02	15.1	0.0	2.2	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
Pox_VP8_L4R	PF04498.7	gi|557693665|ref|YP_008796719.1|	-	0.029	13.6	0.0	0.032	13.5	0.0	1.1	1	0	0	1	1	1	0	Poxvirus	nucleic	acid	binding	protein	VP8/L4R
EamA	PF00892.15	gi|557693666|ref|YP_008796720.1|	-	6.6e-15	55.2	19.0	8.2e-15	54.9	13.2	1.1	1	0	0	1	1	1	1	EamA-like	transporter	family
EmrE	PF13536.1	gi|557693666|ref|YP_008796720.1|	-	1.2e-07	31.9	13.7	1.2e-07	31.9	9.5	2.0	1	1	1	2	2	2	1	Multidrug	resistance	efflux	transporter
UAA	PF08449.6	gi|557693666|ref|YP_008796720.1|	-	5.1e-05	22.3	6.5	7.4e-05	21.8	4.4	1.3	1	1	0	1	1	1	1	UAA	transporter	family
UPF0546	PF10639.4	gi|557693666|ref|YP_008796720.1|	-	0.012	15.4	5.3	0.019	14.7	3.7	1.6	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0546
TPT	PF03151.11	gi|557693666|ref|YP_008796720.1|	-	0.017	14.8	11.5	0.032	13.8	8.0	1.6	1	1	0	1	1	1	0	Triose-phosphate	Transporter	family
Aldedh	PF00171.17	gi|557693667|ref|YP_008796721.1|	-	1.4e-123	412.6	0.5	1.6e-123	412.4	0.3	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
DUF162	PF02589.10	gi|557693667|ref|YP_008796721.1|	-	0.052	13.0	0.0	0.17	11.3	0.0	1.9	1	0	0	1	1	1	0	Uncharacterised	ACR,	YkgG	family	COG1556
AA_synth	PF06684.6	gi|557693668|ref|YP_008796722.1|	-	3.2e-66	221.9	0.1	3.7e-66	221.8	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	synthesis
BPD_transp_2	PF02653.11	gi|557693669|ref|YP_008796723.1|	-	1.4e-29	102.8	39.8	1.9e-29	102.4	27.6	1.1	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
BPD_transp_2	PF02653.11	gi|557693670|ref|YP_008796724.1|	-	7.2e-31	107.1	47.5	9.6e-31	106.7	32.9	1.1	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Cortexin	PF11057.3	gi|557693670|ref|YP_008796724.1|	-	4.2	7.0	6.5	0.79	9.3	1.2	2.3	2	0	0	2	2	2	0	Cortexin	of	kidney
ABC_tran	PF00005.22	gi|557693671|ref|YP_008796725.1|	-	1.4e-33	116.1	0.1	2.1e-33	115.5	0.1	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557693671|ref|YP_008796725.1|	-	1.3e-12	48.3	0.4	1.3e-05	25.3	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|557693671|ref|YP_008796725.1|	-	1.7e-05	24.4	3.3	0.0048	16.6	1.0	2.8	2	1	0	2	2	2	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|557693671|ref|YP_008796725.1|	-	0.00032	20.7	0.1	0.00051	20.0	0.1	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|557693671|ref|YP_008796725.1|	-	0.00037	19.9	0.1	0.00091	18.7	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.1	gi|557693671|ref|YP_008796725.1|	-	0.00057	19.5	1.1	0.0022	17.6	0.8	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|557693671|ref|YP_008796725.1|	-	0.00059	20.2	0.5	0.00084	19.7	0.3	1.6	1	1	0	1	1	1	1	AAA	domain
UPF0079	PF02367.12	gi|557693671|ref|YP_008796725.1|	-	0.0016	18.0	0.2	0.0037	16.8	0.1	1.6	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_14	PF13173.1	gi|557693671|ref|YP_008796725.1|	-	0.002	18.0	0.1	0.11	12.3	0.1	2.3	2	0	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.16	gi|557693671|ref|YP_008796725.1|	-	0.0025	16.9	1.1	0.066	12.3	0.1	2.1	1	1	1	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
ABC_ATPase	PF09818.4	gi|557693671|ref|YP_008796725.1|	-	0.003	16.1	0.7	0.5	8.8	0.2	2.1	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
cobW	PF02492.14	gi|557693671|ref|YP_008796725.1|	-	0.0031	16.9	0.2	0.069	12.5	0.2	2.1	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_25	PF13481.1	gi|557693671|ref|YP_008796725.1|	-	0.0033	16.8	0.1	0.0069	15.8	0.0	1.5	2	0	0	2	2	1	1	AAA	domain
NACHT	PF05729.7	gi|557693671|ref|YP_008796725.1|	-	0.0038	16.8	0.4	0.0038	16.8	0.3	2.0	3	0	0	3	3	2	1	NACHT	domain
Arch_ATPase	PF01637.13	gi|557693671|ref|YP_008796725.1|	-	0.0042	16.8	0.2	0.0064	16.2	0.2	1.6	1	1	0	1	1	1	1	Archaeal	ATPase
MobB	PF03205.9	gi|557693671|ref|YP_008796725.1|	-	0.0046	16.6	0.0	0.0086	15.7	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PIF1	PF05970.9	gi|557693671|ref|YP_008796725.1|	-	0.0046	15.9	0.2	0.013	14.5	0.1	1.7	2	0	0	2	2	2	1	PIF1-like	helicase
SMC_N	PF02463.14	gi|557693671|ref|YP_008796725.1|	-	0.0049	16.1	1.2	0.13	11.5	0.8	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SRP54	PF00448.17	gi|557693671|ref|YP_008796725.1|	-	0.0051	16.2	1.1	0.01	15.2	0.8	1.5	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
DLIC	PF05783.6	gi|557693671|ref|YP_008796725.1|	-	0.0059	15.3	0.2	0.0091	14.7	0.1	1.2	1	0	0	1	1	1	1	Dynein	light	intermediate	chain	(DLIC)
AAA_22	PF13401.1	gi|557693671|ref|YP_008796725.1|	-	0.0073	16.4	1.7	0.096	12.8	0.2	2.1	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|557693671|ref|YP_008796725.1|	-	0.0097	15.0	0.1	0.75	8.8	0.1	2.1	2	0	0	2	2	2	1	Zeta	toxin
Rad17	PF03215.10	gi|557693671|ref|YP_008796725.1|	-	0.012	14.3	0.0	0.1	11.2	0.0	1.9	2	0	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
AAA_28	PF13521.1	gi|557693671|ref|YP_008796725.1|	-	0.017	15.0	0.0	0.14	12.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|557693671|ref|YP_008796725.1|	-	0.028	14.0	0.1	0.038	13.5	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|557693671|ref|YP_008796725.1|	-	0.03	14.2	0.3	0.23	11.3	0.2	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|557693671|ref|YP_008796725.1|	-	0.031	13.3	0.2	1.1	8.2	0.1	2.1	1	1	0	2	2	2	0	AAA	ATPase	domain
T2SE	PF00437.15	gi|557693671|ref|YP_008796725.1|	-	0.031	13.1	0.2	0.056	12.3	0.1	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_10	PF12846.2	gi|557693671|ref|YP_008796725.1|	-	0.035	13.5	0.5	0.085	12.2	0.1	1.7	2	0	0	2	2	2	0	AAA-like	domain
DUF258	PF03193.11	gi|557693671|ref|YP_008796725.1|	-	0.042	13.0	0.1	0.076	12.1	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_33	PF13671.1	gi|557693671|ref|YP_008796725.1|	-	0.043	13.6	0.2	0.078	12.8	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|557693671|ref|YP_008796725.1|	-	0.077	13.4	0.0	0.15	12.5	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
AAA_17	PF13207.1	gi|557693671|ref|YP_008796725.1|	-	0.091	13.5	0.7	0.2	12.4	0.5	1.8	2	1	0	2	2	1	0	AAA	domain
AAA	PF00004.24	gi|557693671|ref|YP_008796725.1|	-	0.1	12.8	1.4	0.14	12.3	0.5	1.7	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|557693671|ref|YP_008796725.1|	-	0.13	11.0	0.7	0.22	10.3	0.1	1.6	2	0	0	2	2	2	0	NB-ARC	domain
P53_C	PF11619.3	gi|557693671|ref|YP_008796725.1|	-	0.15	11.8	0.0	0.41	10.4	0.0	1.7	1	0	0	1	1	1	0	Transcription	factor	P53	-	C	terminal	domain
NTPase_1	PF03266.10	gi|557693671|ref|YP_008796725.1|	-	0.21	11.2	1.6	0.54	9.9	0.4	2.0	2	1	0	2	2	2	0	NTPase
ABC_tran	PF00005.22	gi|557693672|ref|YP_008796726.1|	-	5.9e-26	91.3	0.0	1.1e-25	90.5	0.0	1.4	2	0	0	2	2	2	1	ABC	transporter
BCA_ABC_TP_C	PF12399.3	gi|557693672|ref|YP_008796726.1|	-	2.4e-08	33.4	0.3	5.5e-08	32.3	0.2	1.7	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_21	PF13304.1	gi|557693672|ref|YP_008796726.1|	-	6.5e-06	26.3	0.0	0.00018	21.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|557693672|ref|YP_008796726.1|	-	0.00014	21.9	0.1	0.39	10.8	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|557693672|ref|YP_008796726.1|	-	0.00017	22.0	1.0	0.00026	21.4	0.3	1.5	2	0	0	2	2	2	1	AAA	domain
ABC_ATPase	PF09818.4	gi|557693672|ref|YP_008796726.1|	-	0.0015	17.2	0.5	0.68	8.4	0.0	2.6	3	1	0	3	3	3	2	Predicted	ATPase	of	the	ABC	class
AAA_29	PF13555.1	gi|557693672|ref|YP_008796726.1|	-	0.0029	17.1	0.0	0.0056	16.1	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|557693672|ref|YP_008796726.1|	-	0.0059	15.8	0.0	0.011	14.9	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_10	PF12846.2	gi|557693672|ref|YP_008796726.1|	-	0.0096	15.3	0.2	2.5	7.4	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
Arch_ATPase	PF01637.13	gi|557693672|ref|YP_008796726.1|	-	0.018	14.7	0.3	0.039	13.6	0.2	1.8	1	1	0	1	1	1	0	Archaeal	ATPase
SMC_N	PF02463.14	gi|557693672|ref|YP_008796726.1|	-	0.021	14.0	0.3	0.061	12.5	0.1	1.7	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_30	PF13604.1	gi|557693672|ref|YP_008796726.1|	-	0.025	14.1	0.0	0.11	12.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
PEPcase	PF00311.12	gi|557693672|ref|YP_008796726.1|	-	0.045	11.6	0.1	0.053	11.3	0.1	1.0	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxylase
IstB_IS21	PF01695.12	gi|557693672|ref|YP_008796726.1|	-	0.051	12.9	0.1	7.5	5.9	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Phage_tail_X	PF05489.7	gi|557693672|ref|YP_008796726.1|	-	0.11	12.0	0.0	0.25	10.8	0.0	1.6	1	0	0	1	1	1	0	Phage	Tail	Protein	X
MMR_HSR1	PF01926.18	gi|557693672|ref|YP_008796726.1|	-	0.11	12.4	0.1	0.24	11.3	0.1	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_19	PF13245.1	gi|557693672|ref|YP_008796726.1|	-	0.13	12.0	0.0	0.34	10.7	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
Peripla_BP_6	PF13458.1	gi|557693673|ref|YP_008796727.1|	-	8.6e-59	199.5	0.5	1e-58	199.3	0.4	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
Peripla_BP_5	PF13433.1	gi|557693673|ref|YP_008796727.1|	-	5.1e-27	94.5	0.0	6.6e-27	94.2	0.0	1.0	1	0	0	1	1	1	1	Periplasmic	binding	protein	domain
ANF_receptor	PF01094.23	gi|557693673|ref|YP_008796727.1|	-	4e-20	71.9	0.0	1.1e-19	70.4	0.0	1.6	1	1	0	1	1	1	1	Receptor	family	ligand	binding	region
PrgI	PF12666.2	gi|557693673|ref|YP_008796727.1|	-	0.095	12.8	0.3	0.2	11.8	0.2	1.5	1	0	0	1	1	1	0	PrgI	family	protein
SNN_transmemb	PF09049.5	gi|557693673|ref|YP_008796727.1|	-	0.74	9.5	0.0	0.74	9.5	0.0	2.4	2	0	0	2	2	2	0	Stannin	transmembrane
Bac_luciferase	PF00296.15	gi|557693674|ref|YP_008796728.1|	-	3.3e-57	193.9	0.0	2.4e-55	187.8	0.0	2.1	1	1	0	1	1	1	1	Luciferase-like	monooxygenase
Amidohydro_4	PF13147.1	gi|557693675|ref|YP_008796729.1|	-	1.9e-11	44.5	1.4	6.5e-06	26.3	1.3	2.8	2	1	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|557693675|ref|YP_008796729.1|	-	3.2e-10	39.6	0.1	1.2e-09	37.8	0.1	2.1	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|557693675|ref|YP_008796729.1|	-	3.9e-08	33.3	0.9	1.4e-06	28.2	0.6	2.4	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.6	gi|557693675|ref|YP_008796729.1|	-	1.4e-06	27.8	1.1	0.0063	15.7	0.0	3.1	2	1	0	2	2	2	2	Amidohydrolase	family
TatD_DNase	PF01026.16	gi|557693675|ref|YP_008796729.1|	-	2e-06	27.2	0.0	2.8e-06	26.7	0.0	1.2	1	0	0	1	1	1	1	TatD	related	DNase
FAD_binding_4	PF01565.18	gi|557693675|ref|YP_008796729.1|	-	0.0039	16.6	0.2	0.015	14.7	0.1	2.1	2	1	0	2	2	2	1	FAD	binding	domain
MR_MLE_C	PF13378.1	gi|557693675|ref|YP_008796729.1|	-	0.045	13.7	0.1	0.12	12.3	0.1	1.8	1	1	0	1	1	1	0	Enolase	C-terminal	domain-like
Ald_Xan_dh_C2	PF02738.13	gi|557693676|ref|YP_008796730.1|	-	2.9e-136	454.9	0.0	4e-136	454.5	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557693676|ref|YP_008796730.1|	-	4e-19	68.7	0.0	7.8e-19	67.8	0.0	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
SIMPL	PF04402.9	gi|557693677|ref|YP_008796731.1|	-	4e-42	144.4	3.1	5.1e-42	144.1	2.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF541)
RII_binding_1	PF10522.4	gi|557693677|ref|YP_008796731.1|	-	0.62	10.4	3.1	0.86	9.9	0.0	2.9	3	0	0	3	3	3	0	RII	binding	domain
EamA	PF00892.15	gi|557693678|ref|YP_008796732.1|	-	2.2e-29	102.0	37.0	2.6e-17	63.0	9.0	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
OCD_Mu_crystall	PF02423.10	gi|557693679|ref|YP_008796733.1|	-	4.8e-76	255.5	0.2	5.9e-76	255.2	0.1	1.0	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
F420_oxidored	PF03807.12	gi|557693679|ref|YP_008796733.1|	-	0.001	19.4	0.0	0.0029	17.9	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|557693679|ref|YP_008796733.1|	-	0.0017	18.4	0.0	0.0036	17.3	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|557693679|ref|YP_008796733.1|	-	0.016	15.7	0.0	0.029	14.9	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
DUF4462	PF14692.1	gi|557693679|ref|YP_008796733.1|	-	0.086	12.1	0.0	0.15	11.3	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4462)
Peptidase_S8	PF00082.17	gi|557693680|ref|YP_008796734.1|	-	7.8e-46	156.4	1.9	7.2e-26	90.9	0.5	2.5	2	1	0	3	3	3	2	Subtilase	family
Pribosyltran	PF00156.22	gi|557693681|ref|YP_008796735.1|	-	1e-10	41.4	0.1	1.4e-10	41.0	0.1	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
MFS_1	PF07690.11	gi|557693682|ref|YP_008796736.1|	-	1.9e-25	89.3	50.9	2.5e-25	88.9	29.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|557693682|ref|YP_008796736.1|	-	0.086	12.6	0.2	0.086	12.6	0.1	2.8	2	0	0	2	2	2	0	MFS_1	like	family
Acyl-CoA_dh_1	PF00441.19	gi|557693683|ref|YP_008796737.1|	-	4.7e-36	124.1	0.2	6.5e-36	123.6	0.1	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|557693683|ref|YP_008796737.1|	-	1.8e-17	62.5	0.1	3.8e-17	61.5	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|557693683|ref|YP_008796737.1|	-	3.8e-15	56.3	0.1	5.6e-15	55.7	0.1	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|557693683|ref|YP_008796737.1|	-	1.6e-12	48.0	0.0	3.6e-12	46.8	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Nterm_IS4	PF13006.2	gi|557693683|ref|YP_008796737.1|	-	0.13	12.3	0.0	0.33	11.0	0.0	1.7	1	0	0	1	1	1	0	Insertion	element	4	transposase	N-terminal
OCD_Mu_crystall	PF02423.10	gi|557693684|ref|YP_008796738.1|	-	3.2e-61	206.8	0.3	3.6e-61	206.6	0.2	1.0	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|557693684|ref|YP_008796738.1|	-	3.2e-07	30.5	0.0	6.8e-07	29.4	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Semialdhyde_dh	PF01118.19	gi|557693684|ref|YP_008796738.1|	-	0.012	15.9	0.0	0.039	14.2	0.0	1.9	1	1	1	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|557693684|ref|YP_008796738.1|	-	0.026	14.9	0.1	0.076	13.4	0.1	1.8	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_7	PF13241.1	gi|557693684|ref|YP_008796738.1|	-	0.034	14.4	0.0	0.082	13.1	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Pentapeptide	PF00805.17	gi|557693684|ref|YP_008796738.1|	-	0.054	12.7	0.1	0.096	11.9	0.0	1.4	1	0	0	1	1	1	0	Pentapeptide	repeats	(8	copies)
AMP-binding_C_2	PF14535.1	gi|557693685|ref|YP_008796739.1|	-	4.5e-24	84.3	0.1	7.6e-24	83.5	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|557693685|ref|YP_008796739.1|	-	1.7e-17	62.9	0.6	4.1e-17	61.6	0.4	1.5	1	1	0	1	1	1	1	AMP-binding	enzyme
LuxE	PF04443.7	gi|557693685|ref|YP_008796739.1|	-	0.00018	20.2	0.0	0.14	10.8	0.0	2.1	2	0	0	2	2	2	2	Acyl-protein	synthetase,	LuxE
FAA_hydrolase	PF01557.13	gi|557693686|ref|YP_008796740.1|	-	1e-61	208.1	0.0	1.3e-61	207.8	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
HMGL-like	PF00682.14	gi|557693687|ref|YP_008796741.1|	-	1.4e-56	191.8	0.1	2e-56	191.3	0.1	1.2	1	0	0	1	1	1	1	HMGL-like
RelB	PF04221.7	gi|557693687|ref|YP_008796741.1|	-	0.0026	17.4	0.0	0.0084	15.8	0.0	1.9	2	0	0	2	2	2	1	RelB	antitoxin
E1_dh	PF00676.15	gi|557693688|ref|YP_008796742.1|	-	3.8e-86	288.5	0.0	4.5e-86	288.2	0.0	1.0	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.1	gi|557693688|ref|YP_008796742.1|	-	1.4e-06	27.4	0.0	2.4e-06	26.7	0.0	1.3	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|557693688|ref|YP_008796742.1|	-	4.7e-05	23.0	0.5	0.00044	19.8	0.3	2.1	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Transketolase_N	PF00456.16	gi|557693688|ref|YP_008796742.1|	-	0.0054	15.5	0.0	0.0075	15.1	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
ParBc	PF02195.13	gi|557693689|ref|YP_008796743.1|	-	3.7e-10	39.7	0.0	7.5e-10	38.7	0.0	1.5	1	0	0	1	1	1	1	ParB-like	nuclease	domain
DUF1015	PF06245.6	gi|557693689|ref|YP_008796743.1|	-	1.4e-07	30.3	0.0	2.9e-06	26.0	0.0	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1015)
2-Hacid_dh_C	PF02826.14	gi|557693690|ref|YP_008796744.1|	-	3.9e-70	234.6	0.1	5.5e-70	234.1	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|557693690|ref|YP_008796744.1|	-	1.2e-31	108.9	0.3	1.4e-31	108.7	0.2	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|557693690|ref|YP_008796744.1|	-	3.8e-10	39.8	0.5	1.5e-09	37.8	0.1	2.0	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.16	gi|557693690|ref|YP_008796744.1|	-	5.1e-10	39.4	0.2	9.4e-10	38.5	0.1	1.4	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
IlvN	PF07991.7	gi|557693690|ref|YP_008796744.1|	-	7.9e-05	22.0	0.1	0.0002	20.8	0.0	1.7	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
3HCDH_N	PF02737.13	gi|557693690|ref|YP_008796744.1|	-	0.0001	22.0	0.9	0.00037	20.1	0.2	2.1	1	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|557693690|ref|YP_008796744.1|	-	0.0043	17.4	0.1	0.02	15.3	0.1	2.2	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
ELFV_dehydrog	PF00208.16	gi|557693690|ref|YP_008796744.1|	-	0.0094	15.5	0.1	0.017	14.7	0.1	1.3	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
F420_ligase	PF01996.11	gi|557693690|ref|YP_008796744.1|	-	0.0097	14.9	0.1	0.017	14.2	0.0	1.4	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
XdhC_C	PF13478.1	gi|557693690|ref|YP_008796744.1|	-	0.0098	16.2	0.0	0.028	14.7	0.0	1.8	1	0	0	1	1	1	1	XdhC	Rossmann	domain
Gp_dh_N	PF00044.19	gi|557693690|ref|YP_008796744.1|	-	0.017	15.1	0.0	0.042	13.7	0.0	1.8	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Oxidored_nitro	PF00148.14	gi|557693690|ref|YP_008796744.1|	-	0.037	12.6	0.1	0.23	10.0	0.1	2.0	2	0	0	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
TrkA_N	PF02254.13	gi|557693690|ref|YP_008796744.1|	-	0.04	13.9	1.2	0.15	12.0	0.1	2.5	3	0	0	3	3	3	0	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|557693690|ref|YP_008796744.1|	-	0.07	12.6	1.6	0.62	9.6	1.1	2.2	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Ribosomal_S26e	PF01283.14	gi|557693691|ref|YP_008796745.1|	-	2.7e-25	88.8	1.7	2.9e-25	88.7	1.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
zf-dskA_traR	PF01258.12	gi|557693691|ref|YP_008796745.1|	-	0.0094	15.6	0.6	0.57	9.9	0.0	2.3	2	0	0	2	2	2	2	Prokaryotic	dksA/traR	C4-type	zinc	finger
Peptidase_M48	PF01435.13	gi|557693692|ref|YP_008796746.1|	-	1.5e-40	139.1	0.0	1.9e-40	138.8	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|557693692|ref|YP_008796746.1|	-	0.00011	21.3	0.2	0.00023	20.2	0.0	1.6	2	0	0	2	2	2	1	BlaR1	peptidase	M56
DUF3040	PF11239.3	gi|557693692|ref|YP_008796746.1|	-	9.6	6.3	8.4	13	5.9	2.3	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
HGTP_anticodon	PF03129.15	gi|557693693|ref|YP_008796747.1|	-	7.7e-18	64.2	0.3	2.2e-17	62.7	0.2	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.20	gi|557693693|ref|YP_008796747.1|	-	1.4e-17	63.8	0.1	2.7e-17	62.9	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
ProRS-C_1	PF09180.6	gi|557693693|ref|YP_008796747.1|	-	8.6e-15	54.4	0.2	1.9e-14	53.3	0.1	1.6	1	0	0	1	1	1	1	Prolyl-tRNA	synthetase,	C-terminal
DUF4258	PF14076.1	gi|557693694|ref|YP_008796748.1|	-	0.00057	19.8	0.7	0.0012	18.8	0.5	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4258)
GSAP-16	PF14959.1	gi|557693694|ref|YP_008796748.1|	-	0.046	13.4	0.0	0.062	13.0	0.0	1.2	1	0	0	1	1	1	0	gamma-Secretase-activating	protein	C-term
DUF2283	PF10049.4	gi|557693695|ref|YP_008796749.1|	-	1.2e-17	63.4	2.8	1.8e-17	62.8	1.9	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2283)
ATP-synt_D	PF01813.12	gi|557693696|ref|YP_008796750.1|	-	7.9e-56	188.7	9.3	9e-56	188.5	6.5	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
SOUL	PF04832.7	gi|557693696|ref|YP_008796750.1|	-	0.036	13.6	0.0	0.054	13.0	0.0	1.3	1	0	0	1	1	1	0	SOUL	heme-binding	protein
Atg14	PF10186.4	gi|557693696|ref|YP_008796750.1|	-	0.27	10.1	3.0	3.4	6.5	0.8	2.1	2	0	0	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Polysacc_synt_C	PF14667.1	gi|557693697|ref|YP_008796751.1|	-	0.064	13.0	11.0	0.024	14.4	2.1	2.4	2	1	0	2	2	2	0	Polysaccharide	biosynthesis	C-terminal	domain
Asp_protease_2	PF13650.1	gi|557693698|ref|YP_008796752.1|	-	1.3e-06	28.7	0.1	1.7e-06	28.3	0.1	1.2	1	0	0	1	1	1	1	Aspartyl	protease
RVP	PF00077.15	gi|557693698|ref|YP_008796752.1|	-	3e-05	23.8	0.0	3.8e-05	23.5	0.0	1.1	1	0	0	1	1	1	1	Retroviral	aspartyl	protease
gag-asp_proteas	PF13975.1	gi|557693698|ref|YP_008796752.1|	-	0.0016	18.2	0.0	0.0027	17.4	0.0	1.4	1	0	0	1	1	1	1	gag-polyprotein	putative	aspartyl	protease
HEPN	PF05168.9	gi|557693699|ref|YP_008796753.1|	-	5.7e-28	97.1	0.1	6.7e-28	96.9	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
Vps52	PF04129.7	gi|557693699|ref|YP_008796753.1|	-	0.14	10.6	0.0	0.15	10.5	0.0	1.1	1	0	0	1	1	1	0	Vps52	/	Sac2	family
NTP_transf_2	PF01909.18	gi|557693700|ref|YP_008796754.1|	-	2.3e-07	31.0	0.2	3e-07	30.6	0.2	1.3	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|557693700|ref|YP_008796754.1|	-	0.005	16.4	0.0	0.0083	15.7	0.0	1.4	1	0	0	1	1	1	1	Putative	nucleotidyltransferase	DUF294
PMBR	PF09373.5	gi|557693700|ref|YP_008796754.1|	-	0.02	14.8	0.1	0.065	13.2	0.0	1.9	2	0	0	2	2	2	0	Pseudomurein-binding	repeat
NTP_transferase	PF00483.18	gi|557693701|ref|YP_008796755.1|	-	2e-26	92.7	0.0	4.1e-26	91.7	0.0	1.4	1	1	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|557693701|ref|YP_008796755.1|	-	3.1e-08	33.8	0.0	6e-08	32.9	0.0	1.4	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
CABIT	PF12736.2	gi|557693701|ref|YP_008796755.1|	-	0.065	12.2	0.0	0.1	11.6	0.0	1.3	1	0	0	1	1	1	0	Cell-cycle	sustaining,	positive	selection,
UDPG_MGDP_dh_N	PF03721.9	gi|557693702|ref|YP_008796756.1|	-	2.2e-57	193.4	0.0	5.2e-57	192.2	0.0	1.6	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.14	gi|557693702|ref|YP_008796756.1|	-	8e-34	115.7	0.0	1.4e-33	114.9	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.10	gi|557693702|ref|YP_008796756.1|	-	6.1e-32	109.9	0.0	1.4e-31	108.7	0.0	1.6	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_binding_2	PF03446.10	gi|557693702|ref|YP_008796756.1|	-	1.8e-08	34.3	0.0	4.4e-05	23.3	0.0	2.6	2	0	0	2	2	2	2	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|557693702|ref|YP_008796756.1|	-	3.1e-08	33.5	0.0	1.3e-06	28.2	0.0	2.9	3	0	0	3	3	3	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|557693702|ref|YP_008796756.1|	-	1.5e-07	31.2	0.0	1.4e-06	28.0	0.0	2.3	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|557693702|ref|YP_008796756.1|	-	4e-06	27.1	0.0	0.0098	16.3	0.0	3.3	3	0	0	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|557693702|ref|YP_008796756.1|	-	8.5e-06	25.0	0.1	0.0041	16.2	0.0	2.5	2	1	0	2	2	2	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|557693702|ref|YP_008796756.1|	-	7e-05	22.3	0.0	0.00019	20.9	0.0	1.7	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
DAO	PF01266.19	gi|557693702|ref|YP_008796756.1|	-	8.2e-05	21.6	0.6	0.00015	20.7	0.4	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|557693702|ref|YP_008796756.1|	-	0.0001	22.4	0.1	1.5	9.0	0.0	3.2	3	0	0	3	3	3	2	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|557693702|ref|YP_008796756.1|	-	0.00022	21.2	0.1	0.0076	16.2	0.0	2.6	2	0	0	2	2	2	1	TrkA-N	domain
Ldh_1_N	PF00056.18	gi|557693702|ref|YP_008796756.1|	-	0.0059	16.4	0.1	0.05	13.4	0.0	2.4	2	1	0	2	2	2	1	lactate/malate	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|557693702|ref|YP_008796756.1|	-	0.0064	16.0	0.0	0.025	14.1	0.0	2.1	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox	PF00070.22	gi|557693702|ref|YP_008796756.1|	-	0.0086	16.4	0.3	0.048	14.0	0.2	2.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Methyltransf_23	PF13489.1	gi|557693702|ref|YP_008796756.1|	-	0.018	14.7	0.0	0.12	12.0	0.0	2.2	2	0	0	2	2	2	0	Methyltransferase	domain
FAD_binding_3	PF01494.14	gi|557693702|ref|YP_008796756.1|	-	0.075	12.0	0.0	0.11	11.5	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
NAD_binding_10	PF13460.1	gi|557693702|ref|YP_008796756.1|	-	0.081	12.9	0.5	1.3	8.9	0.2	2.6	2	1	0	2	2	2	0	NADH(P)-binding
Pyr_redox_2	PF07992.9	gi|557693702|ref|YP_008796756.1|	-	0.12	12.2	0.0	0.51	10.1	0.0	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|557693702|ref|YP_008796756.1|	-	0.14	12.2	0.2	0.36	10.8	0.2	1.7	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
Glycos_transf_1	PF00534.15	gi|557693703|ref|YP_008796757.1|	-	1.2e-40	138.7	0.0	1.6e-40	138.2	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|557693703|ref|YP_008796757.1|	-	2.9e-19	69.5	0.1	5.1e-19	68.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|557693703|ref|YP_008796757.1|	-	5.1e-14	52.3	0.0	8.8e-14	51.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.15	gi|557693704|ref|YP_008796758.1|	-	3.5e-16	59.1	0.0	5.6e-16	58.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.1	gi|557693704|ref|YP_008796758.1|	-	0.00054	19.7	0.0	0.0016	18.2	0.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_4_4	PF13579.1	gi|557693704|ref|YP_008796758.1|	-	0.00076	19.6	0.5	0.0016	18.6	0.1	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glyco_transf_4	PF13439.1	gi|557693704|ref|YP_008796758.1|	-	0.0077	15.9	0.0	0.013	15.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Epimerase	PF01370.16	gi|557693705|ref|YP_008796759.1|	-	1.7e-21	76.7	0.1	2.1e-21	76.4	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|557693705|ref|YP_008796759.1|	-	2.5e-13	49.3	0.2	3.3e-13	48.9	0.1	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|557693705|ref|YP_008796759.1|	-	6e-10	38.4	0.0	1.1e-09	37.6	0.0	1.3	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.1	gi|557693705|ref|YP_008796759.1|	-	4.9e-08	33.1	0.2	8.5e-08	32.4	0.1	1.5	1	0	0	1	1	1	1	NADH(P)-binding
Polysacc_synt_2	PF02719.10	gi|557693705|ref|YP_008796759.1|	-	3.8e-06	26.0	2.2	0.03	13.2	0.3	2.7	2	1	0	2	2	2	2	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|557693705|ref|YP_008796759.1|	-	3.8e-06	26.0	0.1	0.00011	21.1	0.0	2.1	2	0	0	2	2	2	1	Male	sterility	protein
adh_short	PF00106.20	gi|557693705|ref|YP_008796759.1|	-	0.0052	16.7	1.9	0.038	13.9	1.3	2.3	1	1	0	1	1	1	1	short	chain	dehydrogenase
Saccharop_dh	PF03435.13	gi|557693705|ref|YP_008796759.1|	-	0.0085	15.1	0.8	0.012	14.5	0.6	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
NmrA	PF05368.8	gi|557693705|ref|YP_008796759.1|	-	0.016	14.4	0.3	0.034	13.3	0.2	1.6	1	1	0	1	1	1	0	NmrA-like	family
Pyr_redox	PF00070.22	gi|557693705|ref|YP_008796759.1|	-	0.049	14.0	0.6	0.54	10.6	0.4	2.5	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF1820	PF08850.6	gi|557693705|ref|YP_008796759.1|	-	0.089	12.9	0.0	0.24	11.5	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1820)
3HCDH_N	PF02737.13	gi|557693705|ref|YP_008796759.1|	-	0.14	11.8	0.2	0.26	10.8	0.1	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Methyltransf_11	PF08241.7	gi|557693706|ref|YP_008796760.1|	-	5.6e-10	39.5	0.0	7.7e-10	39.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|557693706|ref|YP_008796760.1|	-	3.7e-09	36.4	0.0	9.2e-09	35.2	0.0	1.6	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|557693706|ref|YP_008796760.1|	-	4.7e-06	26.2	0.0	5.9e-06	25.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|557693706|ref|YP_008796760.1|	-	5.9e-05	23.4	0.0	8.2e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|557693706|ref|YP_008796760.1|	-	0.00063	20.0	0.0	0.00099	19.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557693706|ref|YP_008796760.1|	-	0.015	15.9	0.0	0.021	15.4	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
CMAS	PF02353.15	gi|557693706|ref|YP_008796760.1|	-	0.022	13.8	0.0	0.031	13.3	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_9	PF08003.6	gi|557693706|ref|YP_008796760.1|	-	0.05	12.3	0.0	0.059	12.0	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
Methyltransf_29	PF03141.11	gi|557693706|ref|YP_008796760.1|	-	0.073	11.4	0.0	0.22	9.7	0.0	1.6	1	1	0	1	1	1	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
Polysacc_synt_3	PF13440.1	gi|557693707|ref|YP_008796761.1|	-	1.6e-07	31.1	25.2	1.6e-07	31.1	17.5	3.5	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
Glyco_trans_1_4	PF13692.1	gi|557693708|ref|YP_008796762.1|	-	1.5e-18	67.2	0.0	2.2e-18	66.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.15	gi|557693708|ref|YP_008796762.1|	-	1.5e-17	63.5	0.0	2.2e-17	63.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|557693708|ref|YP_008796762.1|	-	1e-09	38.5	0.0	1.7e-09	37.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|557693708|ref|YP_008796762.1|	-	3.2e-08	33.5	0.0	5.3e-08	32.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|557693708|ref|YP_008796762.1|	-	0.00022	21.3	0.1	0.0007	19.7	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glycos_transf_1	PF00534.15	gi|557693709|ref|YP_008796763.1|	-	2.4e-47	160.5	0.1	3.5e-47	160.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|557693709|ref|YP_008796763.1|	-	4.1e-19	69.0	0.0	6.3e-19	68.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|557693709|ref|YP_008796763.1|	-	2.3e-10	40.8	0.0	4e-10	40.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|557693709|ref|YP_008796763.1|	-	5.1e-10	39.5	0.0	1.2e-09	38.3	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|557693709|ref|YP_008796763.1|	-	7e-09	35.6	0.0	1.1e-08	35.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.1	gi|557693709|ref|YP_008796763.1|	-	5.4e-08	32.7	0.0	1.2e-07	31.6	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glycogen_syn	PF05693.8	gi|557693709|ref|YP_008796763.1|	-	0.016	13.4	0.0	0.022	13.0	0.0	1.2	1	0	0	1	1	1	0	Glycogen	synthase
Epimerase	PF01370.16	gi|557693710|ref|YP_008796764.1|	-	8.7e-53	179.1	0.0	1.1e-52	178.8	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|557693710|ref|YP_008796764.1|	-	1.1e-18	67.2	0.0	9.6e-18	64.0	0.0	2.0	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
RmlD_sub_bind	PF04321.12	gi|557693710|ref|YP_008796764.1|	-	1.6e-16	60.0	0.0	2.2e-16	59.5	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.7	gi|557693710|ref|YP_008796764.1|	-	8.9e-14	51.0	0.0	2.3e-13	49.6	0.0	1.6	1	1	0	1	1	1	1	Male	sterility	protein
3Beta_HSD	PF01073.14	gi|557693710|ref|YP_008796764.1|	-	1.1e-12	47.2	0.0	1.6e-12	46.7	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.1	gi|557693710|ref|YP_008796764.1|	-	5.8e-09	36.2	0.0	1.3e-08	35.0	0.0	1.6	1	0	0	1	1	1	1	NADH(P)-binding
adh_short	PF00106.20	gi|557693710|ref|YP_008796764.1|	-	1.1e-06	28.6	0.0	2e-06	27.8	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|557693710|ref|YP_008796764.1|	-	7.5e-05	22.4	0.0	0.00013	21.6	0.0	1.4	1	0	0	1	1	1	1	KR	domain
Epimerase_Csub	PF13950.1	gi|557693710|ref|YP_008796764.1|	-	0.00014	21.7	0.0	0.00027	20.8	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose	4-epimerase	C-term	subunit
HEPN	PF05168.9	gi|557693711|ref|YP_008796765.1|	-	1.3e-05	25.0	0.0	1.4e-05	24.9	0.0	1.1	1	0	0	1	1	1	1	HEPN	domain
NTP_transf_2	PF01909.18	gi|557693712|ref|YP_008796766.1|	-	2.3e-10	40.6	0.1	3.1e-10	40.2	0.0	1.5	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|557693712|ref|YP_008796766.1|	-	0.00011	21.7	0.0	0.00026	20.6	0.0	1.5	2	0	0	2	2	2	1	Putative	nucleotidyltransferase	DUF294
GlnE	PF03710.10	gi|557693712|ref|YP_008796766.1|	-	0.095	11.9	0.0	0.15	11.3	0.0	1.3	1	0	0	1	1	1	0	Glutamate-ammonia	ligase	adenylyltransferase
Ribosomal_S30	PF04758.9	gi|557693713|ref|YP_008796767.1|	-	1.9e-11	43.5	0.7	2.2e-11	43.2	0.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S30
Big_3_2	PF12245.3	gi|557693715|ref|YP_008796769.1|	-	0.081	12.4	0.0	0.18	11.4	0.0	1.6	1	0	0	1	1	1	0	Bacterial	Ig-like	domain	(group	3)
SWM_repeat	PF13753.1	gi|557693715|ref|YP_008796769.1|	-	0.11	11.5	0.0	0.14	11.2	0.0	1.2	1	0	0	1	1	1	0	Putative	flagellar	system-associated	repeat
Nop	PF01798.13	gi|557693717|ref|YP_008796771.1|	-	2.6e-49	166.3	0.5	9.8e-49	164.4	0.2	1.9	2	0	0	2	2	2	1	Putative	snoRNA	binding	domain
NOSIC	PF08060.8	gi|557693717|ref|YP_008796771.1|	-	3e-16	58.9	0.1	6.9e-16	57.7	0.0	1.6	1	0	0	1	1	1	1	NOSIC	(NUC001)	domain
UPF0150	PF03681.10	gi|557693717|ref|YP_008796771.1|	-	0.0098	15.5	0.4	0.11	12.2	0.0	2.5	3	0	0	3	3	3	1	Uncharacterised	protein	family	(UPF0150)
Fibrillarin	PF01269.12	gi|557693718|ref|YP_008796772.1|	-	1.1e-88	296.0	0.0	1.2e-88	295.9	0.0	1.0	1	0	0	1	1	1	1	Fibrillarin
PCMT	PF01135.14	gi|557693718|ref|YP_008796772.1|	-	0.00034	20.2	0.0	0.00043	19.8	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
GCD14	PF08704.5	gi|557693718|ref|YP_008796772.1|	-	0.00099	18.6	0.0	0.0012	18.3	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.1	gi|557693718|ref|YP_008796772.1|	-	0.0056	16.2	0.0	0.007	15.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|557693718|ref|YP_008796772.1|	-	0.022	14.7	0.0	0.029	14.3	0.0	1.2	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
RNase_HII	PF01351.13	gi|557693719|ref|YP_008796773.1|	-	1.5e-35	122.6	0.0	1.9e-35	122.3	0.0	1.1	1	0	0	1	1	1	1	Ribonuclease	HII
NTPase_1	PF03266.10	gi|557693720|ref|YP_008796774.1|	-	6.3e-51	172.4	0.1	7.1e-51	172.2	0.1	1.0	1	0	0	1	1	1	1	NTPase
DUF2478	PF10649.4	gi|557693720|ref|YP_008796774.1|	-	0.002	17.4	0.0	0.0036	16.6	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2478)
AAA_30	PF13604.1	gi|557693720|ref|YP_008796774.1|	-	0.003	17.1	0.1	0.0038	16.8	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|557693720|ref|YP_008796774.1|	-	0.0061	15.3	1.0	0.0095	14.7	0.2	1.6	2	0	0	2	2	2	1	ArgK	protein
AAA_16	PF13191.1	gi|557693720|ref|YP_008796774.1|	-	0.016	15.2	0.0	0.33	10.8	0.0	2.2	1	1	0	2	2	2	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557693720|ref|YP_008796774.1|	-	0.026	14.6	0.1	0.16	12.1	0.1	2.3	1	1	0	1	1	1	0	AAA	domain
VirC1	PF07015.6	gi|557693720|ref|YP_008796774.1|	-	0.031	13.3	0.0	0.058	12.4	0.0	1.4	1	0	0	1	1	1	0	VirC1	protein
NACHT	PF05729.7	gi|557693720|ref|YP_008796774.1|	-	0.039	13.6	0.1	0.057	13.0	0.0	1.8	1	1	0	1	1	1	0	NACHT	domain
MobB	PF03205.9	gi|557693720|ref|YP_008796774.1|	-	0.046	13.4	0.1	0.083	12.5	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|557693720|ref|YP_008796774.1|	-	0.064	13.0	0.1	0.13	11.9	0.1	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA	PF00004.24	gi|557693720|ref|YP_008796774.1|	-	0.076	13.2	0.0	0.14	12.3	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|557693720|ref|YP_008796774.1|	-	0.14	12.4	0.1	0.3	11.3	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
TRM	PF02005.11	gi|557693721|ref|YP_008796775.1|	-	5.9e-88	295.3	0.0	7.2e-88	295.0	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Met_10	PF02475.11	gi|557693721|ref|YP_008796775.1|	-	3e-07	30.2	0.0	4.4e-07	29.6	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_26	PF13659.1	gi|557693721|ref|YP_008796775.1|	-	7e-07	29.2	0.3	3.2e-06	27.1	0.2	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|557693721|ref|YP_008796775.1|	-	0.0067	15.8	0.0	0.012	14.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|557693721|ref|YP_008796775.1|	-	0.0094	15.5	0.0	0.013	15.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|557693721|ref|YP_008796775.1|	-	0.013	14.8	0.0	0.022	14.1	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
PrmA	PF06325.8	gi|557693721|ref|YP_008796775.1|	-	0.024	13.7	0.1	0.034	13.2	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Spermine_synth	PF01564.12	gi|557693721|ref|YP_008796775.1|	-	0.061	12.2	0.0	0.094	11.6	0.0	1.2	1	0	0	1	1	1	0	Spermine/spermidine	synthase
Methyltransf_24	PF13578.1	gi|557693721|ref|YP_008796775.1|	-	0.07	13.9	0.0	0.18	12.6	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|557693721|ref|YP_008796775.1|	-	0.18	10.8	0.0	0.32	10.0	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase
FtsJ	PF01728.14	gi|557693722|ref|YP_008796776.1|	-	2.2e-40	138.5	0.0	2.5e-40	138.3	0.0	1.0	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
PCMT	PF01135.14	gi|557693722|ref|YP_008796776.1|	-	1.4e-06	27.9	0.0	1.8e-06	27.6	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Fibrillarin	PF01269.12	gi|557693722|ref|YP_008796776.1|	-	1.1e-05	24.4	0.0	1.6e-05	23.9	0.0	1.4	1	1	0	1	1	1	1	Fibrillarin
Methyltransf_31	PF13847.1	gi|557693722|ref|YP_008796776.1|	-	8.7e-05	22.1	0.0	0.00019	21.0	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|557693722|ref|YP_008796776.1|	-	0.00014	21.8	0.2	0.0002	21.3	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557693722|ref|YP_008796776.1|	-	0.00038	21.0	0.1	0.00063	20.3	0.1	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|557693722|ref|YP_008796776.1|	-	0.004	17.5	0.1	0.0086	16.5	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Nol1_Nop2_Fmu	PF01189.12	gi|557693722|ref|YP_008796776.1|	-	0.025	13.9	0.0	0.04	13.2	0.0	1.2	1	0	0	1	1	1	0	NOL1/NOP2/sun	family
Methyltransf_23	PF13489.1	gi|557693722|ref|YP_008796776.1|	-	0.097	12.3	0.0	0.28	10.8	0.0	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
RNA_pol_Rpc34	PF05158.7	gi|557693723|ref|YP_008796777.1|	-	0.00056	19.1	0.6	0.098	11.8	0.1	2.1	1	1	1	2	2	2	2	RNA	polymerase	Rpc34	subunit
MarR	PF01047.17	gi|557693723|ref|YP_008796777.1|	-	0.006	16.2	0.0	0.0091	15.6	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|557693723|ref|YP_008796777.1|	-	0.019	15.0	0.0	0.025	14.5	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
TFIIB	PF00382.14	gi|557693724|ref|YP_008796778.1|	-	2.5e-24	84.8	1.2	2e-14	53.1	0.1	2.2	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
Rrf2	PF02082.15	gi|557693724|ref|YP_008796778.1|	-	0.00013	22.0	0.1	0.082	13.0	0.0	2.4	2	0	0	2	2	2	2	Transcriptional	regulator
DUF4129	PF13559.1	gi|557693724|ref|YP_008796778.1|	-	0.011	15.6	0.7	0.025	14.5	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4129)
HTH_36	PF13730.1	gi|557693724|ref|YP_008796778.1|	-	0.03	14.4	0.2	7.2	6.8	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
Cyclin_N	PF00134.18	gi|557693724|ref|YP_008796778.1|	-	0.032	13.8	0.0	0.076	12.5	0.0	1.6	1	0	0	1	1	1	0	Cyclin,	N-terminal	domain
Gar1	PF04410.9	gi|557693725|ref|YP_008796779.1|	-	8.2e-11	41.5	0.0	8.4e-11	41.5	0.0	1.0	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
PRC	PF05239.11	gi|557693725|ref|YP_008796779.1|	-	0.014	15.2	0.1	0.019	14.7	0.0	1.4	1	0	0	1	1	1	0	PRC-barrel	domain
GCV_T_C	PF08669.6	gi|557693725|ref|YP_008796779.1|	-	0.12	12.4	0.0	0.13	12.3	0.0	1.2	1	0	0	1	1	1	0	Glycine	cleavage	T-protein	C-terminal	barrel	domain
SRP19	PF01922.12	gi|557693726|ref|YP_008796780.1|	-	2.9e-22	79.0	0.0	3.3e-22	78.8	0.0	1.0	1	0	0	1	1	1	1	SRP19	protein
Ribosomal_S8e	PF01201.17	gi|557693727|ref|YP_008796781.1|	-	5e-30	104.3	2.9	5.6e-30	104.1	2.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
DUF387	PF04079.11	gi|557693728|ref|YP_008796782.1|	-	9.4e-35	119.3	0.1	1.2e-34	119.0	0.1	1.1	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
HTH_15	PF12324.3	gi|557693728|ref|YP_008796782.1|	-	0.00042	19.9	0.0	0.12	12.0	0.0	2.6	3	0	0	3	3	3	2	Helix-turn-helix	domain	of	alkylmercury	lyase
HTH_20	PF12840.2	gi|557693728|ref|YP_008796782.1|	-	0.012	15.3	0.0	0.072	12.9	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
ScpA_ScpB	PF02616.9	gi|557693729|ref|YP_008796783.1|	-	5.5e-14	52.3	0.9	7.7e-08	32.2	0.5	2.0	2	0	0	2	2	2	2	ScpA/B	protein
Rad21_Rec8	PF04824.11	gi|557693729|ref|YP_008796783.1|	-	0.00013	21.0	0.0	0.00033	19.7	0.0	1.7	1	0	0	1	1	1	1	Conserved	region	of	Rad21	/	Rec8	like	protein
SMC_N	PF02463.14	gi|557693730|ref|YP_008796784.1|	-	1.2e-60	204.4	5.6	4.2e-60	202.7	3.9	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.1	gi|557693730|ref|YP_008796784.1|	-	7.1e-14	52.4	9.8	4e-08	33.5	0.1	3.4	4	1	0	4	4	4	2	AAA	domain
AAA_29	PF13555.1	gi|557693730|ref|YP_008796784.1|	-	2.9e-06	26.6	0.0	4.1e-05	23.0	0.0	2.4	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|557693730|ref|YP_008796784.1|	-	0.0059	15.7	0.1	0.0059	15.7	0.1	5.2	3	2	0	3	3	3	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|557693730|ref|YP_008796784.1|	-	0.057	13.1	0.1	0.32	10.7	0.1	2.4	1	0	0	1	1	1	0	Part	of	AAA	domain
ABC_tran	PF00005.22	gi|557693730|ref|YP_008796784.1|	-	0.28	11.4	0.0	0.28	11.4	0.0	7.2	3	2	1	5	5	5	0	ABC	transporter
AAA_23	PF13476.1	gi|557693730|ref|YP_008796784.1|	-	0.51	10.6	124.4	56	3.9	46.0	7.1	2	2	0	2	2	2	0	AAA	domain
Reo_sigmaC	PF04582.7	gi|557693730|ref|YP_008796784.1|	-	0.78	8.8	43.7	0.77	8.8	1.9	4.7	2	2	0	4	4	4	0	Reovirus	sigma	C	capsid	protein
AAA_22	PF13401.1	gi|557693730|ref|YP_008796784.1|	-	1.5	8.9	0.0	1.5	8.9	0.0	5.8	4	2	4	8	8	8	0	AAA	domain
Peptidase_M24	PF00557.19	gi|557693731|ref|YP_008796785.1|	-	6.5e-22	78.1	0.0	7.8e-22	77.8	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|557693731|ref|YP_008796785.1|	-	0.062	13.7	0.0	0.12	12.8	0.0	1.5	1	0	0	1	1	1	0	Creatinase/Prolidase	N-terminal	domain
Prenyltransf	PF01255.14	gi|557693732|ref|YP_008796786.1|	-	6.9e-79	264.0	0.0	7.8e-79	263.9	0.0	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
DUF373	PF04123.8	gi|557693733|ref|YP_008796787.1|	-	1.5e-84	284.0	3.5	2e-84	283.5	2.4	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
NTP_transf_2	PF01909.18	gi|557693734|ref|YP_008796788.1|	-	8.3e-09	35.6	0.1	1.2e-08	35.1	0.1	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
LysR_substrate	PF03466.15	gi|557693734|ref|YP_008796788.1|	-	0.031	13.3	0.2	0.095	11.7	0.2	1.7	2	0	0	2	2	2	0	LysR	substrate	binding	domain
DUF86	PF01934.12	gi|557693735|ref|YP_008796789.1|	-	1.8e-14	53.3	0.0	2.3e-14	53.0	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF86
Cytochrom_B562	PF07361.6	gi|557693736|ref|YP_008796790.1|	-	0.0091	16.3	0.4	0.014	15.7	0.3	1.5	1	0	0	1	1	1	1	Cytochrome	b562
AKAP7_RIRII_bdg	PF10470.4	gi|557693736|ref|YP_008796790.1|	-	0.0096	15.7	1.4	0.015	15.0	1.0	1.3	1	0	0	1	1	1	1	PKA-RI-RII	subunit	binding	domain	of	A-kinase	anchor	protein
PP2C_C	PF07830.8	gi|557693736|ref|YP_008796790.1|	-	0.087	12.9	0.6	0.85	9.7	0.2	2.3	3	0	0	3	3	3	0	Protein	serine/threonine	phosphatase	2C,	C-terminal	domain
Ribosomal_S19	PF00203.16	gi|557693737|ref|YP_008796791.1|	-	3.1e-28	97.2	0.1	4.2e-28	96.7	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19
Ribosomal_L2_C	PF03947.13	gi|557693739|ref|YP_008796793.1|	-	2e-33	114.9	0.3	2.8e-33	114.4	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|557693739|ref|YP_008796793.1|	-	1.4e-10	40.9	0.6	2.6e-10	40.1	0.0	1.8	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.15	gi|557693740|ref|YP_008796794.1|	-	1.3e-16	60.3	5.4	1.9e-16	59.7	3.7	1.3	1	1	0	1	1	1	1	Ribosomal	protein	L23
HSDR_N_2	PF13588.1	gi|557693740|ref|YP_008796794.1|	-	0.018	14.8	0.7	0.021	14.6	0.5	1.1	1	0	0	1	1	1	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
SRPRB	PF09439.5	gi|557693740|ref|YP_008796794.1|	-	0.037	13.2	0.3	0.039	13.1	0.2	1.2	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
Ubiquitin_3	PF14836.1	gi|557693740|ref|YP_008796794.1|	-	0.094	12.3	0.2	0.13	11.9	0.1	1.3	1	1	0	1	1	1	0	Ubiquitin-like	domain
Ribosomal_L4	PF00573.17	gi|557693741|ref|YP_008796795.1|	-	1.6e-40	138.5	0.1	1.8e-40	138.3	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L3	PF00297.17	gi|557693742|ref|YP_008796796.1|	-	2.9e-57	194.0	0.1	3.4e-57	193.8	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L3
ATP-grasp_2	PF08442.5	gi|557693742|ref|YP_008796796.1|	-	3.6e-06	26.5	0.2	4.8e-06	26.0	0.1	1.1	1	0	0	1	1	1	1	ATP-grasp	domain
Asn_synthase	PF00733.16	gi|557693744|ref|YP_008796798.1|	-	2.7e-32	112.2	0.2	4.5e-32	111.5	0.2	1.3	1	1	0	1	1	1	1	Asparagine	synthase
NAD_synthase	PF02540.12	gi|557693744|ref|YP_008796798.1|	-	0.068	12.0	0.1	0.11	11.4	0.0	1.3	1	0	0	1	1	1	0	NAD	synthase
HD_3	PF13023.1	gi|557693745|ref|YP_008796799.1|	-	4.1e-32	111.2	0.0	4.9e-32	110.9	0.0	1.0	1	0	0	1	1	1	1	HD	domain
HD	PF01966.17	gi|557693745|ref|YP_008796799.1|	-	2.8e-06	27.3	0.1	4.3e-06	26.7	0.0	1.3	1	0	0	1	1	1	1	HD	domain
Peptidase_S32	PF05579.8	gi|557693745|ref|YP_008796799.1|	-	0.051	12.5	0.0	0.063	12.2	0.0	1.1	1	0	0	1	1	1	0	Equine	arteritis	virus	serine	endopeptidase	S32
DNA_primase_lrg	PF04104.9	gi|557693746|ref|YP_008796800.1|	-	1.3e-27	96.6	0.0	2.2e-27	95.9	0.0	1.3	1	0	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
Erythro-docking	PF09277.6	gi|557693746|ref|YP_008796800.1|	-	0.035	13.7	0.2	0.082	12.6	0.1	1.6	1	0	0	1	1	1	0	Erythronolide	synthase,	docking
MFS_1	PF07690.11	gi|557693747|ref|YP_008796801.1|	-	1.2e-30	106.4	38.2	5.6e-16	58.1	8.1	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|557693747|ref|YP_008796801.1|	-	5.3e-06	25.2	28.3	2.4e-05	23.1	8.6	2.5	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.2	gi|557693747|ref|YP_008796801.1|	-	0.92	9.3	5.5	0.56	10.0	0.1	3.1	3	0	0	3	3	3	0	MFS_1	like	family
Sod_Fe_C	PF02777.13	gi|557693748|ref|YP_008796802.1|	-	5.4e-39	132.3	0.9	8.2e-39	131.7	0.6	1.2	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.17	gi|557693748|ref|YP_008796802.1|	-	2.3e-31	107.9	2.2	3e-31	107.5	0.3	1.9	2	0	0	2	2	2	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
MFS_1	PF07690.11	gi|557693749|ref|YP_008796803.1|	-	4.2e-24	84.9	67.2	5.3e-18	64.8	22.3	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
OATP	PF03137.15	gi|557693749|ref|YP_008796803.1|	-	0.024	12.6	1.5	0.037	12.0	0.3	1.8	2	0	0	2	2	2	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Shisa	PF13908.1	gi|557693750|ref|YP_008796804.1|	-	0.0051	17.0	0.7	0.0077	16.4	0.5	1.2	1	0	0	1	1	1	1	Wnt	and	FGF	inhibitory	regulator
HhH-GPD	PF00730.20	gi|557693751|ref|YP_008796805.1|	-	6.9e-22	77.7	0.0	9.9e-22	77.2	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|557693751|ref|YP_008796805.1|	-	2.5e-08	33.1	0.1	6e-08	31.9	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|557693751|ref|YP_008796805.1|	-	0.00098	19.2	0.5	0.089	12.9	0.1	2.0	1	1	1	2	2	2	2	Helix-hairpin-helix	domain
EndIII_4Fe-2S	PF10576.4	gi|557693751|ref|YP_008796805.1|	-	0.4	10.9	7.3	0.83	9.9	5.1	1.6	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
AhpC-TSA	PF00578.16	gi|557693752|ref|YP_008796806.1|	-	1.9e-44	150.3	0.0	2.2e-44	150.1	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|557693752|ref|YP_008796806.1|	-	2.8e-26	91.8	0.0	3.2e-26	91.6	0.0	1.0	1	0	0	1	1	1	1	Redoxin
DUF899	PF05988.7	gi|557693752|ref|YP_008796806.1|	-	1.8e-06	27.5	0.0	2.2e-06	27.2	0.0	1.0	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
Thioredoxin_8	PF13905.1	gi|557693752|ref|YP_008796806.1|	-	7.1e-05	22.8	0.0	0.0001	22.3	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like
AhpC-TSA_2	PF13911.1	gi|557693752|ref|YP_008796806.1|	-	0.00015	21.6	0.0	0.00029	20.7	0.0	1.3	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
SCO1-SenC	PF02630.9	gi|557693752|ref|YP_008796806.1|	-	0.011	15.3	0.0	0.018	14.6	0.0	1.3	1	0	0	1	1	1	0	SCO1/SenC
ACT	PF01842.20	gi|557693752|ref|YP_008796806.1|	-	0.016	14.7	0.2	0.75	9.3	0.0	2.7	3	1	0	3	3	3	0	ACT	domain
Fe-S_biosyn	PF01521.15	gi|557693753|ref|YP_008796807.1|	-	1.3e-20	73.3	0.0	1.5e-20	73.1	0.0	1.0	1	0	0	1	1	1	1	Iron-sulphur	cluster	biosynthesis
RNA_pol_A_bac	PF01000.21	gi|557693754|ref|YP_008796808.1|	-	5.2e-24	84.5	0.0	7.4e-24	84.0	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|557693754|ref|YP_008796808.1|	-	1.1e-10	40.4	0.0	1.4e-10	40.0	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Elf1	PF05129.8	gi|557693754|ref|YP_008796808.1|	-	0.088	12.5	0.3	0.15	11.7	0.2	1.3	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Ribosomal_L18e	PF00828.14	gi|557693755|ref|YP_008796809.1|	-	1e-16	61.4	0.4	1.3e-16	61.1	0.3	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
RNA_pol_Rpb2_4	PF04566.8	gi|557693755|ref|YP_008796809.1|	-	0.012	15.4	2.6	0.032	14.0	1.2	1.9	1	1	1	2	2	2	0	RNA	polymerase	Rpb2,	domain	4
PsbP	PF01789.11	gi|557693755|ref|YP_008796809.1|	-	0.064	12.6	0.0	0.087	12.2	0.0	1.2	1	0	0	1	1	1	0	PsbP
CpcD	PF01383.16	gi|557693755|ref|YP_008796809.1|	-	0.96	9.6	3.6	4.1	7.6	0.0	2.7	2	1	0	2	2	2	0	CpcD/allophycocyanin	linker	domain
Ribosomal_L13	PF00572.13	gi|557693756|ref|YP_008796810.1|	-	2.3e-21	76.1	0.1	3.4e-21	75.6	0.1	1.3	1	1	0	1	1	1	1	Ribosomal	protein	L13
PHB_acc_N	PF07879.6	gi|557693756|ref|YP_008796810.1|	-	0.012	15.3	0.1	0.19	11.4	0.0	2.3	2	0	0	2	2	2	0	PHB/PHA	accumulation	regulator	DNA-binding	domain
RsgI_N	PF12791.2	gi|557693756|ref|YP_008796810.1|	-	0.088	12.4	0.0	0.25	11.0	0.0	1.8	1	0	0	1	1	1	0	Anti-sigma	factor	N-terminus
Ribosomal_S9	PF00380.14	gi|557693757|ref|YP_008796811.1|	-	8.2e-32	109.9	0.0	9.4e-32	109.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
DUF3886	PF13025.1	gi|557693757|ref|YP_008796811.1|	-	0.14	12.1	0.5	0.23	11.4	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3886)
RNA_pol_N	PF01194.12	gi|557693758|ref|YP_008796812.1|	-	2.2e-29	101.2	0.7	2.7e-29	100.9	0.5	1.1	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.7	gi|557693758|ref|YP_008796812.1|	-	0.0029	17.6	0.2	0.0038	17.2	0.2	1.3	1	0	0	1	1	1	1	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Enolase_C	PF00113.17	gi|557693759|ref|YP_008796813.1|	-	1.1e-58	198.5	0.0	1.6e-58	198.0	0.0	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|557693759|ref|YP_008796813.1|	-	2.6e-28	98.5	0.0	4.1e-28	97.9	0.0	1.3	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE	PF01188.16	gi|557693759|ref|YP_008796813.1|	-	0.00087	19.7	0.0	0.0021	18.5	0.0	1.7	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_C	PF13378.1	gi|557693759|ref|YP_008796813.1|	-	0.0021	18.0	0.0	0.0058	16.5	0.0	1.8	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
Succ_CoA_lig	PF13607.1	gi|557693759|ref|YP_008796813.1|	-	0.02	14.5	0.0	0.041	13.4	0.0	1.4	1	0	0	1	1	1	0	Succinyl-CoA	ligase	like	flavodoxin	domain
MAAL_C	PF07476.6	gi|557693759|ref|YP_008796813.1|	-	0.13	11.1	0.0	0.21	10.5	0.0	1.3	1	0	0	1	1	1	0	Methylaspartate	ammonia-lyase	C-terminus
Ribosomal_S2	PF00318.15	gi|557693760|ref|YP_008796814.1|	-	3.2e-33	114.7	0.7	8e-16	57.8	0.0	2.0	1	1	1	2	2	2	2	Ribosomal	protein	S2
DNA_pol_B	PF00136.16	gi|557693761|ref|YP_008796815.1|	-	5e-27	94.8	0.0	8.6e-27	94.0	0.0	1.3	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|557693761|ref|YP_008796815.1|	-	7.7e-09	34.8	0.0	1.4e-08	34.0	0.0	1.3	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
Bac_luciferase	PF00296.15	gi|557693762|ref|YP_008796816.1|	-	2.9e-62	210.5	0.0	4.4e-62	209.9	0.0	1.2	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
TMP-TENI	PF02581.12	gi|557693762|ref|YP_008796816.1|	-	0.095	11.8	0.0	0.19	10.8	0.0	1.5	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
PIN	PF01850.16	gi|557693763|ref|YP_008796817.1|	-	8.7e-11	42.2	0.2	1.1e-10	41.8	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
ComZ	PF10815.3	gi|557693764|ref|YP_008796818.1|	-	0.066	12.9	0.2	0.11	12.2	0.1	1.4	1	1	0	1	1	1	0	ComZ
RHH_4	PF13467.1	gi|557693764|ref|YP_008796818.1|	-	0.078	12.8	0.4	0.72	9.7	0.3	2.4	1	1	0	1	1	1	0	Ribbon-helix-helix	domain
UPF0047	PF01894.12	gi|557693766|ref|YP_008796820.1|	-	1.5e-36	124.7	0.1	1.8e-36	124.5	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
DUF4256	PF14066.1	gi|557693767|ref|YP_008796821.1|	-	1.5e-66	223.1	0.0	1.7e-66	223.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4256)
Methyltransf_11	PF08241.7	gi|557693768|ref|YP_008796822.1|	-	5e-12	46.1	0.0	7.4e-12	45.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|557693768|ref|YP_008796822.1|	-	7.5e-07	28.8	0.0	9.6e-07	28.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|557693768|ref|YP_008796822.1|	-	6.5e-05	22.1	0.0	7.5e-05	21.9	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_26	PF13659.1	gi|557693768|ref|YP_008796822.1|	-	0.00017	21.5	0.0	0.00027	20.9	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557693768|ref|YP_008796822.1|	-	0.0016	18.9	0.0	0.0024	18.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|557693768|ref|YP_008796822.1|	-	0.0056	16.3	0.0	0.0073	15.9	0.0	1.2	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_12	PF08242.7	gi|557693768|ref|YP_008796822.1|	-	0.013	15.9	0.0	0.022	15.2	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
PMT_2	PF13231.1	gi|557693769|ref|YP_008796823.1|	-	9.3e-16	58.1	10.8	9.3e-16	58.1	7.5	3.0	2	1	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.13	gi|557693769|ref|YP_008796823.1|	-	5.3e-07	29.2	11.8	0.00073	18.9	8.0	3.9	2	1	1	3	3	3	2	Dolichyl-phosphate-mannose-protein	mannosyltransferase
ELFV_dehydrog	PF00208.16	gi|557693770|ref|YP_008796824.1|	-	3.4e-26	92.3	0.0	5.6e-26	91.6	0.0	1.2	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|557693770|ref|YP_008796824.1|	-	5.6e-22	77.7	0.0	9.6e-22	76.9	0.0	1.3	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
Peptidase_M24	PF00557.19	gi|557693771|ref|YP_008796825.1|	-	1.1e-33	116.5	0.0	1.5e-33	116.1	0.0	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
DUF92	PF01940.11	gi|557693772|ref|YP_008796826.1|	-	1.2e-50	171.7	11.4	1.5e-50	171.4	7.9	1.0	1	0	0	1	1	1	1	Integral	membrane	protein	DUF92
Desulfoferrod_N	PF06397.7	gi|557693772|ref|YP_008796826.1|	-	0.022	14.1	1.4	0.043	13.2	0.9	1.4	1	0	0	1	1	1	0	Desulfoferrodoxin,	N-terminal	domain
Kelch_1	PF01344.20	gi|557693772|ref|YP_008796826.1|	-	0.031	13.8	0.2	0.085	12.4	0.1	1.8	1	0	0	1	1	1	0	Kelch	motif
Kelch_5	PF13854.1	gi|557693772|ref|YP_008796826.1|	-	0.24	11.4	4.3	0.17	11.8	0.7	2.5	2	0	0	2	2	2	0	Kelch	motif
CTP_transf_1	PF01148.15	gi|557693772|ref|YP_008796826.1|	-	0.87	9.1	15.8	7.8	6.0	10.9	2.2	1	1	0	1	1	1	0	Cytidylyltransferase	family
tRNA-synt_His	PF13393.1	gi|557693773|ref|YP_008796827.1|	-	7.6e-71	238.7	0.0	8.6e-71	238.5	0.0	1.0	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|557693773|ref|YP_008796827.1|	-	1.8e-23	83.0	0.1	4e-23	81.8	0.0	1.6	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
tRNA-synt_2d	PF01409.15	gi|557693773|ref|YP_008796827.1|	-	6.3e-05	22.2	0.0	0.00011	21.5	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.15	gi|557693773|ref|YP_008796827.1|	-	0.0087	14.8	0.2	0.82	8.3	0.0	2.4	2	1	0	2	2	2	2	tRNA	synthetases	class	II	(D,	K	and	N)
Trypsin_2	PF13365.1	gi|557693774|ref|YP_008796828.1|	-	2.3e-24	85.6	0.5	4.4e-24	84.7	0.3	1.5	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
Trypsin	PF00089.21	gi|557693774|ref|YP_008796828.1|	-	1.6e-15	57.3	0.2	5.3e-15	55.5	0.2	1.8	1	1	0	1	1	1	1	Trypsin
PDZ_2	PF13180.1	gi|557693774|ref|YP_008796828.1|	-	6.6e-15	54.7	2.1	4.3e-13	48.9	1.5	2.6	1	1	0	1	1	1	1	PDZ	domain
PDZ	PF00595.19	gi|557693774|ref|YP_008796828.1|	-	1.1e-08	35.1	5.1	0.00024	21.1	0.3	2.8	2	1	1	3	3	3	2	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Peptidase_S46	PF10459.4	gi|557693774|ref|YP_008796828.1|	-	0.023	13.1	1.7	0.027	12.9	0.2	1.6	2	0	0	2	2	2	0	Peptidase	S46
Tricorn_PDZ	PF14685.1	gi|557693774|ref|YP_008796828.1|	-	0.067	12.9	1.2	0.35	10.6	0.8	2.3	1	1	0	1	1	1	0	Tricorn	protease	PDZ	domain
FAA_hydrolase	PF01557.13	gi|557693775|ref|YP_008796829.1|	-	8e-63	211.7	0.0	1.1e-62	211.3	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Aldedh	PF00171.17	gi|557693776|ref|YP_008796830.1|	-	1.1e-135	452.5	0.0	1.3e-135	452.3	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|557693776|ref|YP_008796830.1|	-	0.044	12.5	0.0	0.066	11.9	0.0	1.3	1	0	0	1	1	1	0	Acyl-CoA	reductase	(LuxC)
Exotox-A_target	PF09102.5	gi|557693776|ref|YP_008796830.1|	-	0.044	13.2	0.0	0.086	12.3	0.0	1.4	1	0	0	1	1	1	0	Exotoxin	A,	targeting
B5	PF03484.10	gi|557693777|ref|YP_008796831.1|	-	3.7e-27	93.9	0.0	1.9e-17	62.8	0.0	2.8	3	0	0	3	3	3	2	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|557693777|ref|YP_008796831.1|	-	2.5e-08	33.5	0.0	4.5e-08	32.7	0.0	1.4	1	0	0	1	1	1	1	B3/4	domain
HTH_33	PF13592.1	gi|557693777|ref|YP_008796831.1|	-	0.13	11.7	0.0	0.4	10.2	0.0	1.8	2	0	0	2	2	2	0	Winged	helix-turn	helix
tRNA-synt_2d	PF01409.15	gi|557693778|ref|YP_008796832.1|	-	4e-92	307.8	0.0	8.2e-92	306.8	0.0	1.5	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.15	gi|557693778|ref|YP_008796832.1|	-	1.1e-07	30.9	0.5	0.0073	15.1	0.0	3.2	3	0	0	3	3	3	2	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2b	PF00587.20	gi|557693778|ref|YP_008796832.1|	-	0.00075	19.1	0.4	0.012	15.2	0.3	2.2	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
RepC	PF06504.6	gi|557693778|ref|YP_008796832.1|	-	0.024	13.5	0.0	0.039	12.9	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	C	(RepC)
Mrr_N	PF14338.1	gi|557693778|ref|YP_008796832.1|	-	0.089	12.8	0.0	21	5.2	0.0	3.3	3	0	0	3	3	3	0	Mrr	N-terminal	domain
DUF898	PF05987.8	gi|557693779|ref|YP_008796833.1|	-	1.6	7.5	18.8	2.1	7.1	13.0	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF898)
DUF996	PF06195.8	gi|557693779|ref|YP_008796833.1|	-	2.7	7.9	21.5	0.67	9.9	3.4	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF996)
SIS	PF01380.17	gi|557693780|ref|YP_008796834.1|	-	1.8e-09	37.3	0.0	8.5e-09	35.1	0.0	2.1	2	0	0	2	2	2	1	SIS	domain
SIS_2	PF13580.1	gi|557693780|ref|YP_008796834.1|	-	0.001	18.7	0.2	0.0046	16.6	0.0	2.3	2	0	0	2	2	2	1	SIS	domain
AIRS_C	PF02769.17	gi|557693780|ref|YP_008796834.1|	-	0.098	12.6	0.0	1.8	8.5	0.0	2.5	3	0	0	3	3	3	0	AIR	synthase	related	protein,	C-terminal	domain
Bac_luciferase	PF00296.15	gi|557693781|ref|YP_008796835.1|	-	3.6e-60	203.6	0.1	4.6e-60	203.3	0.1	1.1	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Cnd1_N	PF12922.2	gi|557693781|ref|YP_008796835.1|	-	0.19	11.3	0.0	0.3	10.7	0.0	1.2	1	0	0	1	1	1	0	non-SMC	mitotic	condensation	complex	subunit	1,	N-term
Cyclase	PF04199.8	gi|557693782|ref|YP_008796836.1|	-	5.8e-28	97.6	0.0	7.1e-28	97.4	0.0	1.1	1	0	0	1	1	1	1	Putative	cyclase
UbiA	PF01040.13	gi|557693783|ref|YP_008796837.1|	-	8.8e-37	126.7	18.3	1.1e-36	126.4	12.7	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF1600	PF07667.6	gi|557693783|ref|YP_008796837.1|	-	1.6	8.8	5.5	0.33	11.0	0.2	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1600)
tRNA_int_endo	PF01974.12	gi|557693784|ref|YP_008796838.1|	-	1.9e-12	46.7	0.3	3.6e-12	45.9	0.2	1.4	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|557693784|ref|YP_008796838.1|	-	4.6e-07	29.2	0.6	4.6e-07	29.2	0.4	2.1	2	1	1	3	3	3	1	tRNA	intron	endonuclease,	N-terminal	domain
NdhN	PF11909.3	gi|557693784|ref|YP_008796838.1|	-	0.045	13.0	0.0	0.071	12.4	0.0	1.3	1	0	0	1	1	1	0	NADH-quinone	oxidoreductase	cyanobacterial	subunit	N
DUF2012	PF09430.5	gi|557693785|ref|YP_008796839.1|	-	0.029	14.2	0.2	0.051	13.4	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2012)
DUF4129	PF13559.1	gi|557693786|ref|YP_008796840.1|	-	0.00082	19.2	0.1	0.0013	18.6	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4129)
PqiA	PF04403.8	gi|557693786|ref|YP_008796840.1|	-	0.0094	15.5	0.2	0.015	14.8	0.1	1.3	1	0	0	1	1	1	1	Paraquat-inducible	protein	A
Peptidase_S49_N	PF08496.5	gi|557693786|ref|YP_008796840.1|	-	0.061	13.1	0.5	0.076	12.8	0.3	1.1	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
Ribos_L4_asso_C	PF14374.1	gi|557693787|ref|YP_008796841.1|	-	0.1	12.4	0.1	0.16	11.8	0.1	1.3	1	0	0	1	1	1	0	60S	ribosomal	protein	L4	C-terminal	domain
HycH	PF07450.6	gi|557693787|ref|YP_008796841.1|	-	0.11	12.6	0.1	0.14	12.2	0.0	1.2	1	0	0	1	1	1	0	Formate	hydrogenlyase	maturation	protein	HycH
AAA_3	PF07726.6	gi|557693788|ref|YP_008796842.1|	-	3.4e-62	207.8	0.0	5.6e-62	207.1	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|557693788|ref|YP_008796842.1|	-	9.7e-17	60.9	0.0	2.2e-16	59.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
MCM	PF00493.18	gi|557693788|ref|YP_008796842.1|	-	1.5e-07	30.5	0.1	1.3e-06	27.4	0.0	2.1	1	1	0	1	1	1	1	MCM2/3/5	family
AAA	PF00004.24	gi|557693788|ref|YP_008796842.1|	-	6.9e-06	26.3	0.0	1.9e-05	24.8	0.0	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|557693788|ref|YP_008796842.1|	-	3e-05	23.2	1.0	0.0066	15.6	0.2	2.2	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|557693788|ref|YP_008796842.1|	-	0.00015	21.2	0.0	0.0033	16.9	0.0	2.1	2	0	0	2	2	2	1	Sigma-54	interaction	domain
RuvB_N	PF05496.7	gi|557693788|ref|YP_008796842.1|	-	0.00022	20.3	0.0	0.0009	18.3	0.0	2.0	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
DUF58	PF01882.13	gi|557693789|ref|YP_008796843.1|	-	1.9e-11	43.9	0.0	4e-11	42.8	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
Fig1	PF12351.3	gi|557693790|ref|YP_008796844.1|	-	7.5	6.3	14.2	0.056	13.3	3.1	1.9	2	0	0	2	2	2	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
FBPase_3	PF01950.11	gi|557693792|ref|YP_008796846.1|	-	6.8e-168	558.3	0.0	7.7e-168	558.1	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
Histone	PF00125.19	gi|557693793|ref|YP_008796847.1|	-	4.4e-05	23.5	0.0	7.7e-05	22.7	0.0	1.4	1	1	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CBFD_NFYB_HMF	PF00808.18	gi|557693793|ref|YP_008796847.1|	-	0.00021	21.3	0.0	0.00028	20.9	0.0	1.3	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
DUF3809	PF12723.2	gi|557693793|ref|YP_008796847.1|	-	0.046	13.5	0.0	0.053	13.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3809)
ABM	PF03992.11	gi|557693794|ref|YP_008796848.1|	-	5.9e-07	29.4	0.0	7.4e-07	29.1	0.0	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
DUF4188	PF13826.1	gi|557693794|ref|YP_008796848.1|	-	0.071	13.1	0.0	0.091	12.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4188)
AfaD	PF05775.7	gi|557693795|ref|YP_008796849.1|	-	0.14	12.1	0.0	0.18	11.8	0.0	1.2	1	0	0	1	1	1	0	Enterobacteria	AfaD	invasin	protein
DUF72	PF01904.13	gi|557693796|ref|YP_008796850.1|	-	1.4e-40	139.5	1.5	1.7e-40	139.2	1.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
AP_endonuc_2	PF01261.19	gi|557693796|ref|YP_008796850.1|	-	0.044	13.0	0.1	0.1	11.8	0.0	1.8	1	1	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
DUF3370	PF11850.3	gi|557693796|ref|YP_008796850.1|	-	0.1	11.0	0.0	0.13	10.7	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3370)
ERAP1_C	PF11838.3	gi|557693796|ref|YP_008796850.1|	-	0.19	10.9	1.0	4.4	6.4	0.1	2.1	2	0	0	2	2	2	0	ERAP1-like	C-terminal	domain
E1_dh	PF00676.15	gi|557693797|ref|YP_008796851.1|	-	7.5e-86	287.5	0.0	8.6e-86	287.3	0.0	1.0	1	0	0	1	1	1	1	Dehydrogenase	E1	component
Transketolase_N	PF00456.16	gi|557693797|ref|YP_008796851.1|	-	7.2e-07	28.3	0.0	1e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
TPP_enzyme_C	PF02775.16	gi|557693797|ref|YP_008796851.1|	-	8.4e-07	28.6	0.2	4.1e-06	26.4	0.2	2.0	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|557693797|ref|YP_008796851.1|	-	2.6e-06	26.5	0.0	8e-06	24.9	0.0	1.6	1	1	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
Cadherin-like	PF12733.2	gi|557693797|ref|YP_008796851.1|	-	0.036	14.3	0.2	0.062	13.5	0.1	1.4	1	0	0	1	1	1	0	Cadherin-like	beta	sandwich	domain
DUF987	PF06174.6	gi|557693797|ref|YP_008796851.1|	-	0.083	12.4	0.0	0.21	11.1	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF987)
DUF95	PF01944.12	gi|557693798|ref|YP_008796852.1|	-	1.2e-07	31.5	17.8	1.7e-07	31.0	12.3	1.2	1	0	0	1	1	1	1	Integral	membrane	protein	DUF95
FA_desaturase	PF00487.19	gi|557693798|ref|YP_008796852.1|	-	0.27	10.6	8.9	0.35	10.2	2.0	2.1	1	1	1	2	2	2	0	Fatty	acid	desaturase
Arc_PepC_II	PF06847.6	gi|557693799|ref|YP_008796853.1|	-	4.8e-08	33.3	1.2	1.9e-07	31.3	0.1	2.4	2	1	0	2	2	2	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Peptidase_A24	PF01478.13	gi|557693799|ref|YP_008796853.1|	-	4.9e-07	29.8	8.8	4.9e-07	29.8	6.1	1.8	2	0	0	2	2	2	1	Type	IV	leader	peptidase	family
TRIQK	PF15168.1	gi|557693799|ref|YP_008796853.1|	-	0.03	14.2	0.2	3.2	7.7	0.0	2.6	2	1	0	2	2	2	0	Triple	QxxK/R	motif-containing	protein	family
DPM3	PF08285.6	gi|557693799|ref|YP_008796853.1|	-	1.3	8.8	6.2	0.59	10.0	0.6	2.7	2	1	1	3	3	3	0	Dolichol-phosphate	mannosyltransferase	subunit	3	(DPM3)
ELFV_dehydrog	PF00208.16	gi|557693800|ref|YP_008796854.1|	-	1.3e-73	247.5	0.1	2.9e-73	246.4	0.1	1.5	2	0	0	2	2	2	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|557693800|ref|YP_008796854.1|	-	1.1e-51	173.8	0.0	1.7e-51	173.1	0.0	1.3	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.14	gi|557693800|ref|YP_008796854.1|	-	0.0034	16.5	0.0	0.0065	15.6	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|557693800|ref|YP_008796854.1|	-	0.0076	15.8	0.0	0.018	14.6	0.0	1.6	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Malic_M	PF03949.10	gi|557693800|ref|YP_008796854.1|	-	0.027	14.0	0.1	0.049	13.1	0.0	1.3	1	0	0	1	1	1	0	Malic	enzyme,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|557693800|ref|YP_008796854.1|	-	0.046	13.9	0.0	0.11	12.7	0.0	1.7	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Gp_dh_N	PF00044.19	gi|557693800|ref|YP_008796854.1|	-	0.11	12.4	0.2	0.27	11.1	0.0	1.8	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Bac_GDH	PF05088.7	gi|557693800|ref|YP_008796854.1|	-	0.12	9.7	0.0	0.17	9.2	0.0	1.1	1	0	0	1	1	1	0	Bacterial	NAD-glutamate	dehydrogenase
Pribosyltran	PF00156.22	gi|557693801|ref|YP_008796855.1|	-	3e-22	78.6	0.3	4.6e-22	78.0	0.2	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|557693801|ref|YP_008796855.1|	-	4.3e-06	26.0	0.0	6.2e-06	25.5	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|557693801|ref|YP_008796855.1|	-	0.029	13.6	0.0	0.049	12.9	0.0	1.3	1	0	0	1	1	1	0	Phosphoribosyl	transferase
Radical_SAM	PF04055.16	gi|557693802|ref|YP_008796856.1|	-	2.2e-24	86.4	0.0	6e-24	85.0	0.0	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|557693802|ref|YP_008796856.1|	-	2e-20	72.4	0.0	3.4e-20	71.6	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|557693802|ref|YP_008796856.1|	-	4.8e-09	35.8	0.1	9.7e-09	34.8	0.0	1.5	1	0	0	1	1	1	1	TRAM	domain
Copper-bind	PF00127.15	gi|557693803|ref|YP_008796857.1|	-	2.8e-06	27.4	0.2	3.1e-05	24.1	0.2	2.0	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
Cupredoxin_1	PF13473.1	gi|557693803|ref|YP_008796857.1|	-	0.00028	20.7	0.0	0.00041	20.2	0.0	1.3	1	0	0	1	1	1	1	Cupredoxin-like	domain
F420_oxidored	PF03807.12	gi|557693804|ref|YP_008796858.1|	-	7.2e-15	55.1	1.1	1.5e-14	54.2	0.4	1.8	1	1	1	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|557693804|ref|YP_008796858.1|	-	3.6e-07	30.0	0.4	7.1e-07	29.0	0.3	1.5	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|557693804|ref|YP_008796858.1|	-	3.5e-05	23.2	0.1	4.6e-05	22.8	0.0	1.1	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NAD_binding_10	PF13460.1	gi|557693804|ref|YP_008796858.1|	-	0.00012	22.1	5.9	0.0058	16.6	4.1	2.3	1	1	0	1	1	1	1	NADH(P)-binding
adh_short	PF00106.20	gi|557693804|ref|YP_008796858.1|	-	0.00042	20.2	1.5	0.00042	20.2	1.1	1.8	2	0	0	2	2	2	1	short	chain	dehydrogenase
NAD_binding_2	PF03446.10	gi|557693804|ref|YP_008796858.1|	-	0.00055	19.7	0.2	0.00086	19.1	0.2	1.5	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.7	gi|557693804|ref|YP_008796858.1|	-	0.001	18.5	0.1	0.002	17.5	0.0	1.5	1	1	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
3HCDH_N	PF02737.13	gi|557693804|ref|YP_008796858.1|	-	0.0015	18.2	1.7	0.0025	17.5	1.2	1.6	1	1	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
PDH	PF02153.12	gi|557693804|ref|YP_008796858.1|	-	0.015	14.1	0.4	0.039	12.8	0.1	1.7	1	1	1	2	2	2	0	Prephenate	dehydrogenase
NmrA	PF05368.8	gi|557693804|ref|YP_008796858.1|	-	0.018	14.3	0.7	0.018	14.3	0.5	1.6	2	0	0	2	2	2	0	NmrA-like	family
RmlD_sub_bind	PF04321.12	gi|557693804|ref|YP_008796858.1|	-	0.047	12.5	0.4	0.068	12.0	0.3	1.2	1	0	0	1	1	1	0	RmlD	substrate	binding	domain
KR	PF08659.5	gi|557693804|ref|YP_008796858.1|	-	0.065	12.9	1.9	0.072	12.7	0.5	1.6	2	0	0	2	2	2	0	KR	domain
Semialdhyde_dh	PF01118.19	gi|557693804|ref|YP_008796858.1|	-	0.078	13.2	2.3	0.32	11.2	0.2	2.3	1	1	2	3	3	3	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
PGM_PMM_I	PF02878.11	gi|557693805|ref|YP_008796859.1|	-	4.4e-34	116.9	0.0	1e-33	115.7	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_III	PF02880.11	gi|557693805|ref|YP_008796859.1|	-	3.5e-23	81.7	0.1	6.8e-23	80.8	0.1	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_II	PF02879.11	gi|557693805|ref|YP_008796859.1|	-	1.1e-21	77.1	0.0	3e-21	75.6	0.0	1.8	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.15	gi|557693805|ref|YP_008796859.1|	-	1.7e-06	27.9	0.0	4.6e-06	26.5	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
SNARE_assoc	PF09335.6	gi|557693806|ref|YP_008796860.1|	-	8.2e-16	58.3	1.2	8.2e-16	58.3	0.9	2.6	2	1	1	3	3	3	1	SNARE	associated	Golgi	protein
Sm_multidrug_ex	PF06695.6	gi|557693806|ref|YP_008796860.1|	-	0.019	15.1	6.6	6.5	6.9	2.7	3.3	1	1	2	3	3	3	0	Putative	small	multi-drug	export	protein
DZR	PF12773.2	gi|557693808|ref|YP_008796862.1|	-	0.00088	19.0	0.7	0.0013	18.5	0.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RING_4	PF14570.1	gi|557693808|ref|YP_008796862.1|	-	0.00089	18.7	3.7	0.0012	18.3	2.5	1.1	1	0	0	1	1	1	1	RING/Ubox	like	zinc-binding	domain
zf-ribbon_3	PF13248.1	gi|557693808|ref|YP_008796862.1|	-	0.00091	18.3	1.1	0.0012	17.9	0.7	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-C4H2	PF10146.4	gi|557693808|ref|YP_008796862.1|	-	0.001	19.1	3.6	0.0012	18.9	2.5	1.0	1	0	0	1	1	1	1	Zinc	finger-containing	protein
zinc_ribbon_2	PF13240.1	gi|557693808|ref|YP_008796862.1|	-	0.0014	18.0	2.3	0.0022	17.4	1.6	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
UPF0547	PF10571.4	gi|557693808|ref|YP_008796862.1|	-	0.0039	16.8	2.8	0.0075	15.9	1.9	1.5	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
DUF4131	PF13567.1	gi|557693808|ref|YP_008796862.1|	-	0.05	13.0	0.7	0.055	12.8	0.5	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
zf-FCS	PF06467.9	gi|557693808|ref|YP_008796862.1|	-	0.12	11.9	1.0	0.12	11.9	0.7	2.2	1	1	1	2	2	2	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
NfeD	PF01957.13	gi|557693808|ref|YP_008796862.1|	-	0.21	11.7	3.7	0.35	11.0	2.4	1.5	1	1	0	1	1	1	0	NfeD-like	C-terminal,	partner-binding
DUF2244	PF10003.4	gi|557693808|ref|YP_008796862.1|	-	0.6	9.4	5.2	0.78	9.1	3.6	1.1	1	0	0	1	1	1	0	Integral	membrane	protein	(DUF2244)
Tetraspannin	PF00335.15	gi|557693808|ref|YP_008796862.1|	-	1.8	7.7	5.2	4.6	6.4	0.2	2.0	1	1	1	2	2	2	0	Tetraspanin	family
Pex24p	PF06398.6	gi|557693808|ref|YP_008796862.1|	-	3.2	6.4	5.0	3.7	6.2	3.5	1.0	1	0	0	1	1	1	0	Integral	peroxisomal	membrane	peroxin
zf-RING_3	PF14369.1	gi|557693808|ref|YP_008796862.1|	-	4.1	7.4	6.3	23	5.0	3.7	2.0	1	1	1	2	2	2	0	zinc-finger
SdpI	PF13630.1	gi|557693808|ref|YP_008796862.1|	-	4.4	7.0	9.8	8	6.2	1.6	1.9	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
HAD_2	PF13419.1	gi|557693809|ref|YP_008796863.1|	-	6.5e-27	94.8	0.1	1.4e-26	93.7	0.1	1.6	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|557693809|ref|YP_008796863.1|	-	1.8e-14	54.7	2.1	1.4e-13	51.7	0.2	3.0	3	1	0	3	3	1	1	haloacid	dehalogenase-like	hydrolase
T2SE	PF00437.15	gi|557693809|ref|YP_008796863.1|	-	2e-12	46.6	0.0	5.2e-12	45.2	0.0	1.6	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Hydrolase_like	PF13242.1	gi|557693809|ref|YP_008796863.1|	-	2.7e-12	46.1	0.0	1.2e-11	44.1	0.0	2.1	2	0	0	2	2	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|557693809|ref|YP_008796863.1|	-	1.6e-10	41.4	0.1	1.6e-09	38.1	0.0	2.4	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
KH_1	PF00013.24	gi|557693809|ref|YP_008796863.1|	-	2.8e-07	30.0	0.3	2.8e-07	30.0	0.2	2.3	2	0	0	2	2	2	1	KH	domain
NIF	PF03031.13	gi|557693809|ref|YP_008796863.1|	-	1.6e-06	27.8	0.1	0.00029	20.5	0.1	3.1	2	1	0	2	2	2	1	NLI	interacting	factor-like	phosphatase
AAA_17	PF13207.1	gi|557693809|ref|YP_008796863.1|	-	3.7e-05	24.5	3.3	5.5e-05	23.9	0.2	3.0	3	1	0	3	3	1	1	AAA	domain
PIN_4	PF13638.1	gi|557693809|ref|YP_008796863.1|	-	5.1e-05	23.3	0.8	0.011	15.8	0.0	3.1	2	1	0	2	2	2	1	PIN	domain
KH_3	PF13014.1	gi|557693809|ref|YP_008796863.1|	-	5.2e-05	22.7	0.2	0.0003	20.3	0.0	2.2	2	0	0	2	2	2	1	KH	domain
AAA_33	PF13671.1	gi|557693809|ref|YP_008796863.1|	-	7.2e-05	22.6	0.0	0.012	15.5	0.0	3.1	3	1	0	3	3	2	1	AAA	domain
AAA_22	PF13401.1	gi|557693809|ref|YP_008796863.1|	-	0.00017	21.7	0.7	0.066	13.3	0.0	3.3	4	0	0	4	4	2	1	AAA	domain
Put_Phosphatase	PF06888.7	gi|557693809|ref|YP_008796863.1|	-	0.00023	20.3	0.1	0.014	14.5	0.1	2.4	2	0	0	2	2	2	1	Putative	Phosphatase
AAA_18	PF13238.1	gi|557693809|ref|YP_008796863.1|	-	0.00029	21.1	0.6	0.002	18.4	0.0	2.7	3	0	0	3	3	2	1	AAA	domain
Hydrolase_3	PF08282.7	gi|557693809|ref|YP_008796863.1|	-	0.00033	20.3	0.1	8.1	5.9	0.0	3.5	3	0	0	3	3	3	0	haloacid	dehalogenase-like	hydrolase
AAA_25	PF13481.1	gi|557693809|ref|YP_008796863.1|	-	0.00085	18.7	0.1	0.0037	16.6	0.0	2.2	3	0	0	3	3	2	1	AAA	domain
AAA	PF00004.24	gi|557693809|ref|YP_008796863.1|	-	0.0013	18.8	0.7	0.2	11.8	0.0	3.3	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATP_bind_1	PF03029.12	gi|557693809|ref|YP_008796863.1|	-	0.0014	18.2	1.7	0.032	13.7	0.0	2.7	3	0	0	3	3	2	1	Conserved	hypothetical	ATP	binding	protein
Acid_phosphat_B	PF03767.9	gi|557693809|ref|YP_008796863.1|	-	0.0018	17.6	0.0	0.0038	16.6	0.0	1.4	1	0	0	1	1	1	1	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
AAA_16	PF13191.1	gi|557693809|ref|YP_008796863.1|	-	0.0019	18.1	0.4	0.011	15.7	0.0	2.4	3	0	0	3	3	3	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|557693809|ref|YP_008796863.1|	-	0.0026	17.4	0.1	0.032	13.9	0.0	2.8	3	0	0	3	3	2	1	Part	of	AAA	domain
Hydrolase_6	PF13344.1	gi|557693809|ref|YP_008796863.1|	-	0.0031	17.3	0.0	0.034	14.0	0.0	2.8	2	1	0	2	2	1	1	Haloacid	dehalogenase-like	hydrolase
KH_4	PF13083.1	gi|557693809|ref|YP_008796863.1|	-	0.0035	16.9	0.4	0.016	14.8	0.2	2.2	2	0	0	2	2	1	1	KH	domain
Sigma54_activ_2	PF14532.1	gi|557693809|ref|YP_008796863.1|	-	0.0039	17.2	0.0	0.063	13.3	0.0	2.8	2	0	0	2	2	2	1	Sigma-54	interaction	domain
ABC_tran	PF00005.22	gi|557693809|ref|YP_008796863.1|	-	0.0043	17.3	0.1	0.028	14.6	0.0	2.3	2	0	0	2	2	2	1	ABC	transporter
AAA_14	PF13173.1	gi|557693809|ref|YP_008796863.1|	-	0.0046	16.8	0.0	0.013	15.3	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|557693809|ref|YP_008796863.1|	-	0.0048	16.3	0.1	0.024	14.0	0.0	2.2	3	0	0	3	3	3	1	AAA-like	domain
KH_2	PF07650.12	gi|557693809|ref|YP_008796863.1|	-	0.0075	15.8	1.3	0.032	13.8	0.9	2.2	1	0	0	1	1	1	1	KH	domain
SRP54	PF00448.17	gi|557693809|ref|YP_008796863.1|	-	0.0098	15.3	0.0	0.21	11.0	0.0	2.6	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
DUF705	PF05152.7	gi|557693809|ref|YP_008796863.1|	-	0.012	14.6	0.0	0.046	12.6	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF705)
AAA_29	PF13555.1	gi|557693809|ref|YP_008796863.1|	-	0.012	15.1	0.0	0.033	13.7	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
IstB_IS21	PF01695.12	gi|557693809|ref|YP_008796863.1|	-	0.014	14.7	0.0	0.034	13.5	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_5	PF07728.9	gi|557693809|ref|YP_008796863.1|	-	0.014	15.0	0.0	0.051	13.3	0.0	2.0	2	0	0	2	2	1	0	AAA	domain	(dynein-related	subfamily)
Thymidylate_kin	PF02223.12	gi|557693809|ref|YP_008796863.1|	-	0.019	14.3	0.4	0.083	12.2	0.0	2.3	3	0	0	3	3	2	0	Thymidylate	kinase
ADH_zinc_N	PF00107.21	gi|557693809|ref|YP_008796863.1|	-	0.02	14.4	0.6	1.6	8.3	0.1	2.5	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
AAA_30	PF13604.1	gi|557693809|ref|YP_008796863.1|	-	0.022	14.3	0.4	0.25	10.9	0.0	2.7	3	0	0	3	3	2	0	AAA	domain
PPV_E1_C	PF00519.12	gi|557693809|ref|YP_008796863.1|	-	0.022	13.3	0.0	0.035	12.7	0.0	1.2	1	0	0	1	1	1	0	Papillomavirus	helicase
AAA_28	PF13521.1	gi|557693809|ref|YP_008796863.1|	-	0.025	14.5	0.7	0.86	9.5	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
ArgK	PF03308.11	gi|557693809|ref|YP_008796863.1|	-	0.026	13.2	0.0	0.056	12.2	0.0	1.5	1	0	0	1	1	1	0	ArgK	protein
FtsK_SpoIIIE	PF01580.13	gi|557693809|ref|YP_008796863.1|	-	0.028	13.9	0.0	0.12	11.8	0.0	2.0	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Zeta_toxin	PF06414.7	gi|557693809|ref|YP_008796863.1|	-	0.034	13.2	0.6	0.1	11.6	0.0	2.1	2	0	0	2	2	2	0	Zeta	toxin
PIN	PF01850.16	gi|557693809|ref|YP_008796863.1|	-	0.034	14.4	1.0	0.094	13.0	0.1	2.4	2	0	0	2	2	1	0	PIN	domain
KTI12	PF08433.5	gi|557693809|ref|YP_008796863.1|	-	0.044	12.9	0.3	0.13	11.4	0.0	1.9	2	0	0	2	2	1	0	Chromatin	associated	protein	KTI12
NACHT	PF05729.7	gi|557693809|ref|YP_008796863.1|	-	0.059	13.0	0.0	0.26	10.9	0.0	2.1	1	0	0	1	1	1	0	NACHT	domain
PG_binding_2	PF08823.6	gi|557693809|ref|YP_008796863.1|	-	0.077	13.1	0.2	0.48	10.5	0.1	2.2	2	0	0	2	2	2	0	Putative	peptidoglycan	binding	domain
RNA_helicase	PF00910.17	gi|557693809|ref|YP_008796863.1|	-	0.13	12.4	0.0	0.36	11.0	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
Mg_chelatase	PF01078.16	gi|557693809|ref|YP_008796863.1|	-	0.19	10.8	1.4	0.39	9.8	0.0	2.0	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
Thiolase_N	PF00108.18	gi|557693810|ref|YP_008796864.1|	-	8.7e-14	51.1	1.1	9e-11	41.2	0.2	2.2	1	1	1	2	2	2	2	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|557693810|ref|YP_008796864.1|	-	4e-11	42.4	0.1	1.3e-08	34.2	0.0	2.9	2	0	0	2	2	2	2	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|557693810|ref|YP_008796864.1|	-	8.8e-07	28.5	1.6	5.1e-05	22.8	0.2	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
ketoacyl-synt	PF00109.21	gi|557693810|ref|YP_008796864.1|	-	0.00014	21.4	12.1	0.00014	21.3	3.1	3.3	3	1	1	4	4	4	1	Beta-ketoacyl	synthase,	N-terminal	domain
FAE1_CUT1_RppA	PF08392.7	gi|557693810|ref|YP_008796864.1|	-	0.0032	16.5	0.0	0.0052	15.8	0.0	1.3	1	0	0	1	1	1	1	FAE1/Type	III	polyketide	synthase-like	protein
Ketoacyl-synt_C	PF02801.17	gi|557693810|ref|YP_008796864.1|	-	0.0036	17.1	0.8	0.92	9.3	0.1	3.1	3	1	0	3	3	3	1	Beta-ketoacyl	synthase,	C-terminal	domain
HMG_CoA_synt_N	PF01154.12	gi|557693810|ref|YP_008796864.1|	-	0.11	11.9	0.1	0.35	10.4	0.1	1.7	1	1	0	1	1	1	0	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
DUF35	PF01796.12	gi|557693811|ref|YP_008796865.1|	-	1.6e-15	57.1	0.0	2.6e-15	56.4	0.0	1.4	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|557693811|ref|YP_008796865.1|	-	1e-06	28.4	0.2	1e-06	28.4	0.1	1.6	2	0	0	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Pyridox_oxidase	PF01243.15	gi|557693812|ref|YP_008796866.1|	-	3.3e-19	68.6	0.1	4.3e-19	68.3	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyridox_ox_2	PF12900.2	gi|557693812|ref|YP_008796866.1|	-	1.5e-11	44.3	0.0	1.9e-11	43.9	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Amidohydro_1	PF01979.15	gi|557693813|ref|YP_008796867.1|	-	9.6e-54	183.2	0.0	1.3e-53	182.7	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|557693813|ref|YP_008796867.1|	-	8.8e-18	65.3	0.0	3.2e-13	50.3	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|557693813|ref|YP_008796867.1|	-	1e-13	51.3	0.6	9.6e-11	41.5	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|557693813|ref|YP_008796867.1|	-	2.6e-13	49.5	0.3	2.6e-12	46.3	0.0	2.5	1	1	1	2	2	2	1	Amidohydrolase
A_deaminase	PF00962.17	gi|557693813|ref|YP_008796867.1|	-	0.0033	16.3	0.0	0.0075	15.2	0.0	1.6	1	1	0	1	1	1	1	Adenosine/AMP	deaminase
Bac_luciferase	PF00296.15	gi|557693814|ref|YP_008796868.1|	-	1.7e-55	188.3	0.4	2e-55	188.0	0.3	1.0	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Amidohydro_1	PF01979.15	gi|557693815|ref|YP_008796869.1|	-	2.1e-34	119.6	0.0	2.6e-34	119.3	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.6	gi|557693815|ref|YP_008796869.1|	-	3.9e-14	52.6	0.2	1.6e-13	50.7	0.0	1.9	2	0	0	2	2	2	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|557693815|ref|YP_008796869.1|	-	6.8e-11	42.7	0.4	2.5e-09	37.5	0.3	2.4	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|557693815|ref|YP_008796869.1|	-	4.3e-09	36.0	0.1	1.8e-08	34.0	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase
Ald_Xan_dh_C2	PF02738.13	gi|557693816|ref|YP_008796870.1|	-	1.2e-118	396.8	0.0	1.5e-118	396.4	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557693816|ref|YP_008796870.1|	-	1.2e-18	67.2	0.0	2.8e-18	66.0	0.0	1.7	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
MASE1	PF05231.9	gi|557693817|ref|YP_008796871.1|	-	2e-06	27.0	24.5	7.2e-06	25.2	17.3	1.6	1	1	0	1	1	1	1	MASE1
CbiQ	PF02361.11	gi|557693818|ref|YP_008796872.1|	-	3.9e-27	95.2	15.8	3.9e-27	95.2	10.9	1.4	2	0	0	2	2	2	1	Cobalt	transport	protein
Amidohydro_5	PF13594.1	gi|557693819|ref|YP_008796873.1|	-	1.7e-10	40.5	1.4	2.5e-09	36.8	0.1	2.4	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|557693819|ref|YP_008796873.1|	-	1.6e-08	34.9	0.0	0.0012	18.9	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_1	PF01979.15	gi|557693819|ref|YP_008796873.1|	-	8.4e-05	22.3	0.1	0.13	11.9	0.0	2.4	2	0	0	2	2	2	2	Amidohydrolase	family
ABC_tran	PF00005.22	gi|557693820|ref|YP_008796874.1|	-	6.4e-28	97.7	0.0	1.1e-27	97.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557693820|ref|YP_008796874.1|	-	1.6e-09	38.1	0.1	0.00025	21.0	0.0	2.2	1	1	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|557693820|ref|YP_008796874.1|	-	2.5e-06	27.6	0.1	9.3e-05	22.5	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
ATP-synt_ab	PF00006.20	gi|557693820|ref|YP_008796874.1|	-	0.00014	21.4	0.2	0.00082	18.9	0.1	2.0	1	1	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_18	PF13238.1	gi|557693820|ref|YP_008796874.1|	-	0.00029	21.1	0.1	0.008	16.4	0.0	2.2	1	1	2	3	3	3	1	AAA	domain
AAA_29	PF13555.1	gi|557693820|ref|YP_008796874.1|	-	0.0004	19.8	0.1	0.00074	18.9	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|557693820|ref|YP_008796874.1|	-	0.00066	18.9	0.2	0.0065	15.7	0.1	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_13	PF13166.1	gi|557693820|ref|YP_008796874.1|	-	0.0012	17.3	0.0	0.13	10.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|557693820|ref|YP_008796874.1|	-	0.0016	18.7	0.1	0.0027	18.0	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.16	gi|557693820|ref|YP_008796874.1|	-	0.0018	17.4	0.0	0.0031	16.7	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_30	PF13604.1	gi|557693820|ref|YP_008796874.1|	-	0.0021	17.6	0.1	0.0082	15.7	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|557693820|ref|YP_008796874.1|	-	0.0023	17.8	0.3	0.0096	15.8	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|557693820|ref|YP_008796874.1|	-	0.0026	17.2	0.0	0.0033	16.9	0.0	1.2	1	0	0	1	1	1	1	AAA-like	domain
AAA_5	PF07728.9	gi|557693820|ref|YP_008796874.1|	-	0.0026	17.4	0.1	0.035	13.8	0.0	2.3	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|557693820|ref|YP_008796874.1|	-	0.0032	17.4	0.1	0.0077	16.2	0.1	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|557693820|ref|YP_008796874.1|	-	0.0034	16.8	0.1	0.12	11.7	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|557693820|ref|YP_008796874.1|	-	0.0035	17.0	0.2	0.011	15.3	0.1	1.9	2	0	0	2	2	2	1	NACHT	domain
AAA_17	PF13207.1	gi|557693820|ref|YP_008796874.1|	-	0.0044	17.8	0.4	0.012	16.4	0.2	1.9	1	1	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|557693820|ref|YP_008796874.1|	-	0.008	15.3	0.3	0.4	9.7	0.0	2.2	2	0	0	2	2	2	1	KaiC
NTPase_1	PF03266.10	gi|557693820|ref|YP_008796874.1|	-	0.0085	15.8	0.2	0.049	13.3	0.0	2.1	2	0	0	2	2	2	1	NTPase
AAA	PF00004.24	gi|557693820|ref|YP_008796874.1|	-	0.0088	16.2	0.1	0.028	14.6	0.1	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|557693820|ref|YP_008796874.1|	-	0.01	14.6	0.1	0.019	13.8	0.0	1.5	2	0	0	2	2	2	0	NB-ARC	domain
HAD	PF12710.2	gi|557693820|ref|YP_008796874.1|	-	0.012	15.7	0.0	0.041	14.0	0.0	1.8	1	1	1	2	2	2	0	haloacid	dehalogenase-like	hydrolase
AAA_15	PF13175.1	gi|557693820|ref|YP_008796874.1|	-	0.014	14.4	0.1	0.28	10.1	0.0	2.0	2	0	0	2	2	2	0	AAA	ATPase	domain
SRP54	PF00448.17	gi|557693820|ref|YP_008796874.1|	-	0.018	14.4	0.0	0.042	13.3	0.0	1.6	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
UPF0079	PF02367.12	gi|557693820|ref|YP_008796874.1|	-	0.021	14.4	0.1	0.04	13.5	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Zot	PF05707.7	gi|557693820|ref|YP_008796874.1|	-	0.031	13.7	0.3	0.11	11.9	0.2	1.8	1	1	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
AAA_19	PF13245.1	gi|557693820|ref|YP_008796874.1|	-	0.032	14.0	0.1	0.4	10.4	0.1	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
RecA	PF00154.16	gi|557693820|ref|YP_008796874.1|	-	0.032	13.3	0.0	0.24	10.3	0.0	2.0	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
MobB	PF03205.9	gi|557693820|ref|YP_008796874.1|	-	0.034	13.8	0.7	0.086	12.5	0.1	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PduV-EutP	PF10662.4	gi|557693820|ref|YP_008796874.1|	-	0.038	13.4	0.0	0.086	12.3	0.0	1.6	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
Arch_ATPase	PF01637.13	gi|557693820|ref|YP_008796874.1|	-	0.039	13.6	0.2	0.34	10.5	0.0	2.1	2	1	0	2	2	2	0	Archaeal	ATPase
G-alpha	PF00503.15	gi|557693820|ref|YP_008796874.1|	-	0.049	12.3	0.0	0.065	11.9	0.0	1.6	1	1	0	1	1	1	0	G-protein	alpha	subunit
T2SE	PF00437.15	gi|557693820|ref|YP_008796874.1|	-	0.061	12.2	0.3	0.11	11.3	0.0	1.6	2	0	0	2	2	1	0	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|557693820|ref|YP_008796874.1|	-	0.067	12.3	0.1	0.13	11.4	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Pox_A32	PF04665.7	gi|557693820|ref|YP_008796874.1|	-	0.068	12.4	0.2	7	5.8	0.0	2.1	2	0	0	2	2	2	0	Poxvirus	A32	protein
Sigma54_activ_2	PF14532.1	gi|557693820|ref|YP_008796874.1|	-	0.1	12.6	0.0	0.7	9.9	0.0	2.0	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|557693820|ref|YP_008796874.1|	-	0.12	11.9	0.2	1.3	8.5	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
KTI12	PF08433.5	gi|557693820|ref|YP_008796874.1|	-	0.12	11.5	0.0	0.3	10.2	0.0	1.7	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
Zeta_toxin	PF06414.7	gi|557693820|ref|YP_008796874.1|	-	0.12	11.4	0.1	0.39	9.7	0.0	1.7	2	0	0	2	2	2	0	Zeta	toxin
GTP_EFTU	PF00009.22	gi|557693820|ref|YP_008796874.1|	-	0.12	11.7	0.6	0.39	10.1	0.1	1.9	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
AAA_28	PF13521.1	gi|557693820|ref|YP_008796874.1|	-	0.13	12.1	0.9	0.89	9.5	0.2	2.2	1	1	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|557693821|ref|YP_008796875.1|	-	3.1e-28	98.7	0.0	4.2e-28	98.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557693821|ref|YP_008796875.1|	-	1.3e-10	41.7	0.0	4.9e-06	26.7	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557693821|ref|YP_008796875.1|	-	6e-07	28.9	0.0	1.5e-06	27.6	0.0	1.6	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|557693821|ref|YP_008796875.1|	-	3.1e-06	26.7	0.4	4.8e-05	22.8	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|557693821|ref|YP_008796875.1|	-	4.8e-05	23.5	0.3	0.002	18.2	0.2	2.8	2	1	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|557693821|ref|YP_008796875.1|	-	5.8e-05	23.4	0.1	0.00011	22.6	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|557693821|ref|YP_008796875.1|	-	0.00017	20.6	0.0	0.00058	18.8	0.0	1.9	2	1	0	3	3	3	1	Type	II/IV	secretion	system	protein
IstB_IS21	PF01695.12	gi|557693821|ref|YP_008796875.1|	-	0.00027	20.4	0.2	0.011	15.1	0.0	2.1	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_29	PF13555.1	gi|557693821|ref|YP_008796875.1|	-	0.00078	18.9	0.0	0.0015	18.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|557693821|ref|YP_008796875.1|	-	0.0011	18.9	0.0	0.0018	18.2	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|557693821|ref|YP_008796875.1|	-	0.0014	19.4	0.4	0.0035	18.1	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557693821|ref|YP_008796875.1|	-	0.0035	17.0	0.4	0.012	15.3	0.1	2.0	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_10	PF12846.2	gi|557693821|ref|YP_008796875.1|	-	0.0065	15.9	0.2	0.82	9.0	0.2	2.1	1	1	1	2	2	2	1	AAA-like	domain
AAA_18	PF13238.1	gi|557693821|ref|YP_008796875.1|	-	0.0073	16.6	1.2	0.034	14.4	0.1	2.3	3	0	0	3	3	2	1	AAA	domain
NTPase_1	PF03266.10	gi|557693821|ref|YP_008796875.1|	-	0.0079	15.9	1.3	0.043	13.5	0.1	2.1	2	0	0	2	2	2	1	NTPase
AAA	PF00004.24	gi|557693821|ref|YP_008796875.1|	-	0.0092	16.1	1.0	0.12	12.5	0.8	2.5	1	1	1	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Peripla_BP_4	PF13407.1	gi|557693821|ref|YP_008796875.1|	-	0.014	14.7	0.0	0.024	14.0	0.0	1.3	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
UPF0079	PF02367.12	gi|557693821|ref|YP_008796875.1|	-	0.014	15.0	0.0	0.029	13.9	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_28	PF13521.1	gi|557693821|ref|YP_008796875.1|	-	0.014	15.3	0.2	0.032	14.2	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|557693821|ref|YP_008796875.1|	-	0.015	14.5	0.0	0.048	12.8	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
PhoH	PF02562.11	gi|557693821|ref|YP_008796875.1|	-	0.016	14.4	0.0	0.032	13.4	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
AAA_14	PF13173.1	gi|557693821|ref|YP_008796875.1|	-	0.02	14.7	0.4	0.1	12.5	0.3	2.4	1	1	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|557693821|ref|YP_008796875.1|	-	0.027	14.3	0.0	0.18	11.7	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
ABC_ATPase	PF09818.4	gi|557693821|ref|YP_008796875.1|	-	0.03	12.9	0.4	5.1	5.5	0.0	2.5	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
Arch_ATPase	PF01637.13	gi|557693821|ref|YP_008796875.1|	-	0.033	13.8	0.0	0.063	12.9	0.0	1.5	1	1	0	1	1	1	0	Archaeal	ATPase
MobB	PF03205.9	gi|557693821|ref|YP_008796875.1|	-	0.054	13.2	1.5	0.14	11.8	0.2	2.2	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KaiC	PF06745.8	gi|557693821|ref|YP_008796875.1|	-	0.063	12.3	0.6	0.41	9.7	0.1	2.2	2	1	0	2	2	2	0	KaiC
AAA_30	PF13604.1	gi|557693821|ref|YP_008796875.1|	-	0.067	12.7	0.1	0.25	10.8	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|557693821|ref|YP_008796875.1|	-	0.07	13.0	0.0	0.15	12.0	0.0	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
SRP54	PF00448.17	gi|557693821|ref|YP_008796875.1|	-	0.091	12.1	0.2	0.27	10.6	0.0	1.8	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
cobW	PF02492.14	gi|557693821|ref|YP_008796875.1|	-	0.1	12.0	0.6	0.27	10.6	0.1	1.9	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
PduV-EutP	PF10662.4	gi|557693821|ref|YP_008796875.1|	-	0.1	12.0	0.1	0.26	10.7	0.0	1.6	2	0	0	2	2	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
RNA_helicase	PF00910.17	gi|557693821|ref|YP_008796875.1|	-	0.11	12.6	0.0	0.23	11.6	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
ATP-synt_ab	PF00006.20	gi|557693821|ref|YP_008796875.1|	-	0.13	11.7	0.1	0.19	11.2	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
UbiD	PF01977.11	gi|557693822|ref|YP_008796876.1|	-	9.2e-114	380.0	0.0	1.1e-113	379.8	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Bac_luciferase	PF00296.15	gi|557693823|ref|YP_008796877.1|	-	3.4e-52	177.4	0.0	3.7e-52	177.3	0.0	1.0	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
DUF461	PF04314.8	gi|557693824|ref|YP_008796878.1|	-	8.2e-14	51.2	0.4	1.7e-13	50.2	0.3	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF461)
GTP_EFTU	PF00009.22	gi|557693825|ref|YP_008796879.1|	-	2.3e-52	177.2	0.0	4.4e-52	176.2	0.0	1.4	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|557693825|ref|YP_008796879.1|	-	1.5e-27	95.6	0.1	4.2e-27	94.2	0.1	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|557693825|ref|YP_008796879.1|	-	1.7e-17	63.2	1.0	5.1e-17	61.7	0.2	2.2	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|557693825|ref|YP_008796879.1|	-	2e-06	27.3	1.4	5.1e-06	26.0	0.9	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|557693825|ref|YP_008796879.1|	-	6.1e-05	22.9	0.0	0.00021	21.1	0.0	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|557693825|ref|YP_008796879.1|	-	0.0049	17.3	0.1	0.044	14.2	0.1	2.3	1	1	0	1	1	1	1	Miro-like	protein
Gtr1_RagA	PF04670.7	gi|557693825|ref|YP_008796879.1|	-	0.027	13.6	0.1	0.47	9.5	0.0	2.5	1	1	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
DUF1724	PF08350.5	gi|557693825|ref|YP_008796879.1|	-	0.15	11.5	0.1	1.7	8.2	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1724)
Ribosomal_S10	PF00338.17	gi|557693826|ref|YP_008796880.1|	-	9.9e-28	95.8	0.5	1.1e-27	95.6	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
ABC2_membrane_2	PF12679.2	gi|557693827|ref|YP_008796881.1|	-	7.2e-13	48.0	13.9	8.7e-13	47.7	9.6	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|557693827|ref|YP_008796881.1|	-	8.9e-09	34.8	18.7	1.3e-08	34.3	12.9	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|557693827|ref|YP_008796881.1|	-	4.4e-05	22.6	18.8	5.2e-05	22.4	13.0	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|557693828|ref|YP_008796882.1|	-	1.5e-26	93.3	0.0	1.7e-25	89.9	0.0	2.0	1	1	1	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|557693828|ref|YP_008796882.1|	-	7.3e-14	52.4	0.0	7e-06	26.2	0.0	2.2	1	1	0	2	2	2	2	AAA	domain
DUF4162	PF13732.1	gi|557693828|ref|YP_008796882.1|	-	3e-08	34.0	0.0	7e-08	32.8	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.1	gi|557693828|ref|YP_008796882.1|	-	5.5e-05	23.5	0.0	9.2e-05	22.8	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557693828|ref|YP_008796882.1|	-	8.6e-05	21.9	0.1	0.00018	20.9	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|557693828|ref|YP_008796882.1|	-	0.00025	21.0	0.0	0.018	15.0	0.0	2.2	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|557693828|ref|YP_008796882.1|	-	0.00082	18.8	0.2	0.52	9.6	0.1	2.3	2	0	0	2	2	2	2	AAA-like	domain
SMC_N	PF02463.14	gi|557693828|ref|YP_008796882.1|	-	0.00083	18.6	0.0	0.032	13.4	0.1	2.2	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
MobB	PF03205.9	gi|557693828|ref|YP_008796882.1|	-	0.0013	18.4	0.1	0.0065	16.1	0.1	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|557693828|ref|YP_008796882.1|	-	0.0051	16.4	0.2	0.026	14.1	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|557693828|ref|YP_008796882.1|	-	0.0086	16.2	0.2	0.11	12.7	0.0	2.4	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|557693828|ref|YP_008796882.1|	-	0.016	14.9	0.6	0.16	11.7	0.1	2.4	2	0	0	2	2	2	0	Part	of	AAA	domain
SRP54	PF00448.17	gi|557693828|ref|YP_008796882.1|	-	0.022	14.2	0.1	0.041	13.3	0.0	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ArgK	PF03308.11	gi|557693828|ref|YP_008796882.1|	-	0.025	13.3	0.1	0.043	12.5	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
Arch_ATPase	PF01637.13	gi|557693828|ref|YP_008796882.1|	-	0.026	14.2	0.2	0.18	11.5	0.0	2.1	2	0	0	2	2	2	0	Archaeal	ATPase
HMA	PF00403.21	gi|557693828|ref|YP_008796882.1|	-	0.031	14.3	0.6	0.067	13.3	0.4	1.5	1	0	0	1	1	1	0	Heavy-metal-associated	domain
AAA_33	PF13671.1	gi|557693828|ref|YP_008796882.1|	-	0.032	14.0	0.2	0.12	12.2	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_15	PF13175.1	gi|557693828|ref|YP_008796882.1|	-	0.036	13.1	0.0	6	5.7	0.0	2.1	1	1	1	2	2	2	0	AAA	ATPase	domain
AAA_17	PF13207.1	gi|557693828|ref|YP_008796882.1|	-	0.041	14.7	0.6	0.35	11.6	0.1	2.4	2	1	1	3	3	3	0	AAA	domain
NTPase_1	PF03266.10	gi|557693828|ref|YP_008796882.1|	-	0.043	13.5	0.5	0.21	11.2	0.0	2.2	2	1	0	2	2	2	0	NTPase
T2SE	PF00437.15	gi|557693828|ref|YP_008796882.1|	-	0.065	12.1	1.1	0.16	10.8	0.3	1.8	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|557693828|ref|YP_008796882.1|	-	0.071	13.2	0.3	0.37	10.9	0.1	2.3	1	1	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|557693828|ref|YP_008796882.1|	-	0.082	12.2	0.2	0.31	10.4	0.1	2.0	1	1	1	2	2	2	0	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|557693828|ref|YP_008796882.1|	-	0.11	11.1	0.1	4.9	5.6	0.0	2.4	2	1	1	3	3	3	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
cobW	PF02492.14	gi|557693828|ref|YP_008796882.1|	-	0.12	11.8	0.3	0.22	10.9	0.2	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Zeta_toxin	PF06414.7	gi|557693828|ref|YP_008796882.1|	-	0.14	11.2	0.2	0.26	10.3	0.2	1.4	1	0	0	1	1	1	0	Zeta	toxin
PilN	PF05137.8	gi|557693829|ref|YP_008796883.1|	-	0.017	14.9	0.0	0.089	12.6	0.0	2.2	1	1	0	1	1	1	0	Fimbrial	assembly	protein	(PilN)
Aminotran_1_2	PF00155.16	gi|557693830|ref|YP_008796884.1|	-	4.6e-56	190.3	0.0	6.2e-56	189.9	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
CM_2	PF01817.16	gi|557693830|ref|YP_008796884.1|	-	4.4e-10	39.4	2.3	1.3e-09	38.0	1.6	1.9	1	0	0	1	1	1	1	Chorismate	mutase	type	II
Cys_Met_Meta_PP	PF01053.15	gi|557693830|ref|YP_008796884.1|	-	1.3e-09	36.8	0.0	3.8e-09	35.3	0.0	1.8	2	1	0	2	2	2	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|557693830|ref|YP_008796884.1|	-	3.8e-07	29.5	0.0	8.4e-07	28.4	0.0	1.5	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.14	gi|557693830|ref|YP_008796884.1|	-	4.4e-07	28.9	0.0	7.2e-07	28.2	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.12	gi|557693830|ref|YP_008796884.1|	-	3.4e-06	26.3	0.0	6.6e-06	25.3	0.0	1.4	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Alliinase_C	PF04864.8	gi|557693830|ref|YP_008796884.1|	-	0.064	11.8	0.0	0.21	10.1	0.0	1.8	2	0	0	2	2	2	0	Allinase
PDH	PF02153.12	gi|557693831|ref|YP_008796885.1|	-	3.5e-18	65.4	0.1	4.5e-18	65.0	0.0	1.1	1	0	0	1	1	1	1	Prephenate	dehydrogenase
NAD_binding_2	PF03446.10	gi|557693831|ref|YP_008796885.1|	-	3.6e-16	59.4	0.1	6.4e-16	58.6	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|557693831|ref|YP_008796885.1|	-	8.9e-10	38.8	0.2	2.6e-09	37.3	0.1	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
DAO	PF01266.19	gi|557693831|ref|YP_008796885.1|	-	8.6e-07	28.1	0.0	4.6e-06	25.7	0.0	1.9	1	1	1	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|557693831|ref|YP_008796885.1|	-	1.5e-06	26.9	0.8	2.3e-06	26.3	0.1	1.7	2	0	0	2	2	2	1	HI0933-like	protein
3HCDH_N	PF02737.13	gi|557693831|ref|YP_008796885.1|	-	5.7e-06	26.1	0.2	1.6e-05	24.6	0.1	1.9	1	1	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|557693831|ref|YP_008796885.1|	-	7e-06	26.2	0.0	2.6e-05	24.3	0.0	2.2	1	1	0	1	1	1	1	Putative	NAD(P)-binding
NAD_binding_8	PF13450.1	gi|557693831|ref|YP_008796885.1|	-	7e-06	25.9	0.1	1.9e-05	24.5	0.0	1.8	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
2-Hacid_dh_C	PF02826.14	gi|557693831|ref|YP_008796885.1|	-	2.2e-05	23.6	0.0	5.9e-05	22.2	0.0	1.7	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_C	PF03720.10	gi|557693831|ref|YP_008796885.1|	-	3.2e-05	24.0	0.0	9.2e-05	22.5	0.0	1.7	2	0	0	2	2	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
TrkA_N	PF02254.13	gi|557693831|ref|YP_008796885.1|	-	4.3e-05	23.4	0.0	0.00012	22.1	0.0	1.8	1	1	0	1	1	1	1	TrkA-N	domain
Shikimate_DH	PF01488.15	gi|557693831|ref|YP_008796885.1|	-	7.4e-05	22.8	0.1	0.00019	21.5	0.1	1.7	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox_2	PF07992.9	gi|557693831|ref|YP_008796885.1|	-	7.5e-05	22.6	0.1	0.00021	21.2	0.1	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|557693831|ref|YP_008796885.1|	-	0.00015	20.9	1.3	0.0002	20.5	0.0	1.7	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|557693831|ref|YP_008796885.1|	-	0.0004	20.5	0.0	0.00082	19.4	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_10	PF13460.1	gi|557693831|ref|YP_008796885.1|	-	0.001	19.1	0.2	0.0019	18.2	0.1	1.4	1	0	0	1	1	1	1	NADH(P)-binding
Pyr_redox	PF00070.22	gi|557693831|ref|YP_008796885.1|	-	0.0021	18.4	0.0	0.006	16.9	0.0	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_Gly3P_dh_N	PF01210.18	gi|557693831|ref|YP_008796885.1|	-	0.0024	17.5	0.5	0.11	12.1	0.1	2.7	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|557693831|ref|YP_008796885.1|	-	0.0029	17.0	0.1	0.0092	15.3	0.1	1.9	1	1	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ApbA	PF02558.11	gi|557693831|ref|YP_008796885.1|	-	0.0064	15.9	0.1	0.012	15.1	0.1	1.5	1	1	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NAD_binding_9	PF13454.1	gi|557693831|ref|YP_008796885.1|	-	0.0068	16.1	0.0	0.015	15.1	0.0	1.5	1	1	0	1	1	1	1	FAD-NAD(P)-binding
Saccharop_dh	PF03435.13	gi|557693831|ref|YP_008796885.1|	-	0.022	13.7	0.1	0.03	13.2	0.1	1.3	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
XdhC_C	PF13478.1	gi|557693831|ref|YP_008796885.1|	-	0.059	13.6	0.0	0.1	12.9	0.0	1.5	1	0	0	1	1	1	0	XdhC	Rossmann	domain
Thi4	PF01946.12	gi|557693831|ref|YP_008796885.1|	-	0.071	12.2	0.1	0.15	11.1	0.0	1.5	1	1	0	1	1	1	0	Thi4	family
DUF364	PF04016.7	gi|557693831|ref|YP_008796885.1|	-	0.075	12.3	0.0	0.14	11.4	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF364)
ThiF	PF00899.16	gi|557693831|ref|YP_008796885.1|	-	0.1	12.4	0.0	0.39	10.5	0.0	1.9	1	1	1	2	2	2	0	ThiF	family
IlvN	PF07991.7	gi|557693831|ref|YP_008796885.1|	-	0.11	11.8	0.0	0.15	11.3	0.0	1.3	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
CoA_binding_2	PF13380.1	gi|557693831|ref|YP_008796885.1|	-	0.12	12.5	0.0	0.23	11.6	0.0	1.5	1	0	0	1	1	1	0	CoA	binding	domain
Abhydrolase_5	PF12695.2	gi|557693831|ref|YP_008796885.1|	-	0.16	11.7	0.1	0.23	11.2	0.1	1.4	1	1	0	1	1	1	0	Alpha/beta	hydrolase	family
FAD_binding_2	PF00890.19	gi|557693831|ref|YP_008796885.1|	-	0.17	10.6	0.1	0.23	10.2	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
DUF1098	PF06497.6	gi|557693831|ref|YP_008796885.1|	-	0.45	10.6	2.6	0.54	10.3	0.1	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1098)
Nitroreductase	PF00881.19	gi|557693832|ref|YP_008796886.1|	-	5e-31	107.7	0.0	7.3e-31	107.2	0.0	1.2	1	0	0	1	1	1	1	Nitroreductase	family
TM1586_NiRdase	PF14512.1	gi|557693832|ref|YP_008796886.1|	-	0.057	12.5	0.0	1.3	8.1	0.0	2.1	1	1	1	2	2	2	0	Putative	TM	nitroreductase
MarR_2	PF12802.2	gi|557693833|ref|YP_008796887.1|	-	2.8e-05	23.6	0.0	6.6e-05	22.4	0.0	1.6	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|557693833|ref|YP_008796887.1|	-	3.4e-05	23.4	0.0	0.00011	21.8	0.0	1.9	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|557693833|ref|YP_008796887.1|	-	5.5e-05	22.9	0.1	0.00022	20.9	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_20	PF12840.2	gi|557693833|ref|YP_008796887.1|	-	0.00018	21.2	0.0	0.00051	19.7	0.0	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|557693833|ref|YP_008796887.1|	-	0.00019	21.0	0.0	0.00047	19.7	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.15	gi|557693833|ref|YP_008796887.1|	-	0.00074	19.5	0.1	0.0031	17.6	0.0	2.0	2	0	0	2	2	2	1	Transcriptional	regulator
TBPIP	PF07106.8	gi|557693833|ref|YP_008796887.1|	-	0.0016	17.9	0.1	1.8	8.0	0.0	2.5	2	1	0	2	2	2	2	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
HTH_27	PF13463.1	gi|557693833|ref|YP_008796887.1|	-	0.0025	18.0	0.0	0.0097	16.2	0.0	2.0	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
GntR	PF00392.16	gi|557693833|ref|YP_008796887.1|	-	0.0034	16.7	1.8	0.066	12.6	0.1	3.0	3	0	0	3	3	3	1	Bacterial	regulatory	proteins,	gntR	family
MarR	PF01047.17	gi|557693833|ref|YP_008796887.1|	-	0.005	16.5	0.0	0.046	13.4	0.0	2.4	2	0	0	2	2	2	1	MarR	family
HrcA_DNA-bdg	PF03444.10	gi|557693833|ref|YP_008796887.1|	-	0.029	13.8	0.0	0.073	12.5	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HxlR	PF01638.12	gi|557693833|ref|YP_008796887.1|	-	0.03	13.9	0.3	0.095	12.3	0.0	2.0	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
DUF3085	PF11284.3	gi|557693833|ref|YP_008796887.1|	-	0.037	14.2	0.0	0.084	13.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3085)
PadR	PF03551.9	gi|557693833|ref|YP_008796887.1|	-	0.073	12.8	0.0	0.66	9.7	0.0	2.5	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
Mrr_N	PF14338.1	gi|557693833|ref|YP_008796887.1|	-	0.086	12.9	0.1	2.9	8.0	0.0	3.1	3	0	0	3	3	3	0	Mrr	N-terminal	domain
Prim-Pol	PF09250.6	gi|557693834|ref|YP_008796888.1|	-	9.8e-19	67.9	0.0	1.2e-18	67.6	0.0	1.1	1	0	0	1	1	1	1	Bifunctional	DNA	primase/polymerase,	N-terminal
HHH_5	PF14520.1	gi|557693835|ref|YP_008796889.1|	-	0.024	14.7	0.5	0.077	13.1	0.3	2.1	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
RolB_RolC	PF02027.12	gi|557693835|ref|YP_008796889.1|	-	0.028	13.5	0.0	0.034	13.2	0.0	1.2	1	0	0	1	1	1	0	RolB/RolC	glucosidase	family
Sigma70_ner	PF04546.8	gi|557693835|ref|YP_008796889.1|	-	0.062	12.8	0.1	0.14	11.7	0.0	1.6	2	0	0	2	2	2	0	Sigma-70,	non-essential	region
HisKA_3	PF07730.8	gi|557693835|ref|YP_008796889.1|	-	0.083	13.2	0.3	3	8.2	0.0	2.4	2	0	0	2	2	2	0	Histidine	kinase
DUF3631	PF12307.3	gi|557693836|ref|YP_008796890.1|	-	0.00015	21.7	0.0	0.00023	21.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3631)
AAA_23	PF13476.1	gi|557693836|ref|YP_008796890.1|	-	0.0028	18.0	0.0	0.0051	17.1	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|557693837|ref|YP_008796891.1|	-	2.2e-08	34.4	0.0	0.0011	19.2	0.0	2.4	2	0	0	2	2	2	2	ABC	transporter
AAA_22	PF13401.1	gi|557693837|ref|YP_008796891.1|	-	3e-08	33.8	0.0	8.9e-06	25.8	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
Acetyltransf_1	PF00583.19	gi|557693837|ref|YP_008796891.1|	-	3.4e-05	23.7	0.1	0.00015	21.6	0.0	2.2	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
AAA_16	PF13191.1	gi|557693837|ref|YP_008796891.1|	-	0.00016	21.7	0.1	0.0011	19.0	0.0	2.3	2	1	0	2	2	2	1	AAA	ATPase	domain
Acetyltransf_7	PF13508.1	gi|557693837|ref|YP_008796891.1|	-	0.00036	20.6	0.0	0.0012	18.9	0.0	2.0	2	0	0	2	2	1	1	Acetyltransferase	(GNAT)	domain
AAA_10	PF12846.2	gi|557693837|ref|YP_008796891.1|	-	0.00099	18.6	0.3	0.85	8.9	0.1	2.3	2	0	0	2	2	2	2	AAA-like	domain
NACHT	PF05729.7	gi|557693837|ref|YP_008796891.1|	-	0.0012	18.5	0.0	0.018	14.7	0.0	2.5	3	0	0	3	3	3	1	NACHT	domain
AAA_18	PF13238.1	gi|557693837|ref|YP_008796891.1|	-	0.0019	18.4	0.0	0.0046	17.2	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
Acetyltransf_9	PF13527.1	gi|557693837|ref|YP_008796891.1|	-	0.011	15.5	0.0	0.027	14.3	0.0	1.7	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
PIF1	PF05970.9	gi|557693837|ref|YP_008796891.1|	-	0.02	13.8	0.0	0.035	13.0	0.0	1.3	1	0	0	1	1	1	0	PIF1-like	helicase
AAA	PF00004.24	gi|557693837|ref|YP_008796891.1|	-	0.024	14.8	0.1	0.13	12.5	0.0	2.2	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Acetyltransf_CG	PF14542.1	gi|557693837|ref|YP_008796891.1|	-	0.024	14.5	0.0	0.062	13.1	0.0	1.7	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
UPF0079	PF02367.12	gi|557693837|ref|YP_008796891.1|	-	0.026	14.1	0.0	0.049	13.2	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
RNA_helicase	PF00910.17	gi|557693837|ref|YP_008796891.1|	-	0.026	14.6	0.0	0.13	12.4	0.0	2.0	2	0	0	2	2	2	0	RNA	helicase
DUF2122	PF09895.4	gi|557693837|ref|YP_008796891.1|	-	0.048	13.8	0.1	0.8	9.9	0.0	2.4	2	0	0	2	2	2	0	RecB-family	nuclease	(DUF2122)
SH3_2	PF07653.12	gi|557693837|ref|YP_008796891.1|	-	0.057	12.9	0.0	0.15	11.6	0.0	1.6	1	0	0	1	1	1	0	Variant	SH3	domain
AAA_29	PF13555.1	gi|557693837|ref|YP_008796891.1|	-	0.079	12.5	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|557693837|ref|YP_008796891.1|	-	0.096	12.0	0.1	1.9	7.8	0.0	2.7	3	0	0	3	3	3	0	AAA	domain
DUF2075	PF09848.4	gi|557693837|ref|YP_008796891.1|	-	0.12	11.3	0.0	0.22	10.4	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
ACR_tran	PF00873.14	gi|557693838|ref|YP_008796892.1|	-	0.015	12.7	2.8	0.014	12.8	1.9	1.1	1	0	0	1	1	1	0	AcrB/AcrD/AcrF	family
DUF2663	PF10864.3	gi|557693838|ref|YP_008796892.1|	-	0.12	12.6	1.7	0.11	12.7	0.4	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2663)
ABC2_membrane_5	PF13346.1	gi|557693838|ref|YP_008796892.1|	-	1.1	8.5	13.3	1.6	8.0	9.2	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF2721	PF11026.3	gi|557693838|ref|YP_008796892.1|	-	2	8.0	13.0	0.11	12.1	1.3	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2721)
DUF4231	PF14015.1	gi|557693838|ref|YP_008796892.1|	-	3.2	7.7	9.1	3.6	7.6	4.6	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4231)
DUF485	PF04341.7	gi|557693838|ref|YP_008796892.1|	-	4.7	6.9	10.8	5.7	6.7	5.3	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF485
O-antigen_lig	PF13425.1	gi|557693838|ref|YP_008796892.1|	-	4.9	7.1	15.6	0.2	11.6	1.8	2.7	1	1	2	3	3	3	0	O-antigen	ligase	like	membrane	protein
Abi	PF02517.11	gi|557693838|ref|YP_008796892.1|	-	6.7	6.9	13.0	1.4e+02	2.7	7.9	2.4	1	1	1	2	2	2	0	CAAX	protease	self-immunity
Phage_integrase	PF00589.17	gi|557693839|ref|YP_008796893.1|	-	4.5e-26	91.5	0.0	7.9e-26	90.7	0.0	1.4	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.12	gi|557693839|ref|YP_008796893.1|	-	1.2e-05	25.3	0.1	3e-05	24.0	0.1	1.7	1	0	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.1	gi|557693839|ref|YP_008796893.1|	-	0.00073	19.8	0.0	0.0016	18.7	0.0	1.5	1	0	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
TMEM154	PF15102.1	gi|557693840|ref|YP_008796894.1|	-	0.013	15.2	0.7	0.019	14.6	0.2	1.6	2	0	0	2	2	2	0	TMEM154	protein	family
Glyco_tranf_2_3	PF13641.1	gi|557693841|ref|YP_008796895.1|	-	2.2e-17	63.6	0.0	3.5e-17	62.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|557693841|ref|YP_008796895.1|	-	9.7e-15	54.7	0.4	9.7e-15	54.7	0.2	1.9	2	0	0	2	2	2	1	Glycosyl	transferase	family	group	2
Cellulose_synt	PF03552.9	gi|557693841|ref|YP_008796895.1|	-	0.018	13.3	0.1	0.026	12.8	0.0	1.1	1	0	0	1	1	1	0	Cellulose	synthase
AP_endonuc_2	PF01261.19	gi|557693842|ref|YP_008796896.1|	-	1.1e-33	116.3	0.0	1.8e-33	115.6	0.0	1.3	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
AP_endonuc_2_N	PF07582.7	gi|557693842|ref|YP_008796896.1|	-	2.5e-13	49.3	0.0	4.6e-13	48.4	0.0	1.5	1	0	0	1	1	1	1	AP	endonuclease	family	2	C	terminus
H_PPase	PF03030.11	gi|557693843|ref|YP_008796897.1|	-	1.9e-223	743.5	37.3	2.2e-223	743.3	25.9	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
Sec34	PF04136.10	gi|557693844|ref|YP_008796898.1|	-	0.069	12.8	0.3	9.3	5.9	0.0	2.2	2	0	0	2	2	2	0	Sec34-like	family
DUF2312	PF10073.4	gi|557693844|ref|YP_008796898.1|	-	0.12	11.7	1.2	0.52	9.7	0.0	2.6	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
Oxidored_molyb	PF00174.14	gi|557693845|ref|YP_008796899.1|	-	2.3e-43	147.5	0.1	3e-43	147.1	0.0	1.1	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
Flavin_Reduct	PF01613.13	gi|557693846|ref|YP_008796900.1|	-	1.4e-17	64.0	0.0	1.5e-17	63.8	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
NT5C	PF06941.7	gi|557693847|ref|YP_008796901.1|	-	1e-15	57.7	1.2	1.2e-15	57.4	0.8	1.0	1	0	0	1	1	1	1	5'	nucleotidase,	deoxy	(Pyrimidine),	cytosolic	type	C	protein	(NT5C)
HAD_2	PF13419.1	gi|557693847|ref|YP_008796901.1|	-	0.0045	17.2	0.3	0.0081	16.3	0.2	1.4	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Pro-kuma_activ	PF09286.6	gi|557693847|ref|YP_008796901.1|	-	0.11	12.4	0.0	0.19	11.7	0.0	1.4	1	0	0	1	1	1	0	Pro-kumamolisin,	activation	domain
DEAD	PF00270.24	gi|557693848|ref|YP_008796902.1|	-	1e-16	60.8	0.0	2.2e-16	59.8	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|557693848|ref|YP_008796902.1|	-	4.4e-10	39.2	0.7	1.8e-09	37.3	0.2	2.3	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|557693848|ref|YP_008796902.1|	-	0.00041	20.2	0.0	0.00078	19.3	0.0	1.4	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AIG2	PF06094.7	gi|557693849|ref|YP_008796903.1|	-	3.4e-13	49.9	0.2	4.8e-13	49.4	0.1	1.2	1	0	0	1	1	1	1	AIG2-like	family
AIG2_2	PF13772.1	gi|557693849|ref|YP_008796903.1|	-	3.4e-12	46.3	0.1	4.4e-12	45.9	0.1	1.2	1	0	0	1	1	1	1	AIG2-like	family
ChaC	PF04752.7	gi|557693849|ref|YP_008796903.1|	-	0.0028	17.6	0.3	0.0091	15.9	0.1	1.8	1	1	1	2	2	2	1	ChaC-like	protein
DAO	PF01266.19	gi|557693850|ref|YP_008796904.1|	-	4.5e-49	167.2	0.0	5.6e-49	166.9	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|557693850|ref|YP_008796904.1|	-	1.1e-06	27.9	3.3	0.00044	19.4	0.8	2.4	2	1	0	2	2	2	2	Thi4	family
NAD_binding_8	PF13450.1	gi|557693850|ref|YP_008796904.1|	-	6e-06	26.1	1.5	1.2e-05	25.2	1.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|557693850|ref|YP_008796904.1|	-	1.3e-05	24.2	1.0	0.0002	20.3	0.6	2.1	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|557693850|ref|YP_008796904.1|	-	1.4e-05	25.1	1.7	0.0073	16.2	1.2	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|557693850|ref|YP_008796904.1|	-	0.00065	19.8	0.1	0.016	15.3	0.1	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|557693850|ref|YP_008796904.1|	-	0.0008	18.4	0.3	0.017	14.0	0.2	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|557693850|ref|YP_008796904.1|	-	0.0011	19.3	0.3	0.041	14.2	0.2	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|557693850|ref|YP_008796904.1|	-	0.0048	15.8	0.2	1.9	7.2	0.1	2.2	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|557693850|ref|YP_008796904.1|	-	0.0058	15.1	0.4	0.75	8.2	0.2	2.2	2	0	0	2	2	2	2	HI0933-like	protein
Mqo	PF06039.10	gi|557693850|ref|YP_008796904.1|	-	0.015	13.5	0.0	0.023	12.9	0.0	1.1	1	0	0	1	1	1	0	Malate:quinone	oxidoreductase	(Mqo)
FAD_oxidored	PF12831.2	gi|557693850|ref|YP_008796904.1|	-	0.017	14.2	0.1	0.024	13.7	0.1	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|557693850|ref|YP_008796904.1|	-	0.27	9.8	0.4	0.38	9.3	0.3	1.2	1	0	0	1	1	1	0	Tryptophan	halogenase
NAD_binding_9	PF13454.1	gi|557693850|ref|YP_008796904.1|	-	0.31	10.7	3.1	13	5.5	0.2	2.9	2	1	1	3	3	3	0	FAD-NAD(P)-binding
Diphthamide_syn	PF01866.12	gi|557693851|ref|YP_008796905.1|	-	3.6e-71	239.9	0.0	4.5e-71	239.5	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
DUF1847	PF08901.6	gi|557693851|ref|YP_008796905.1|	-	0.0081	15.6	0.0	0.14	11.6	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1847)
ACT_7	PF13840.1	gi|557693851|ref|YP_008796905.1|	-	0.018	14.5	0.0	0.044	13.3	0.0	1.6	1	0	0	1	1	1	0	ACT	domain
Prok-RING_1	PF14446.1	gi|557693852|ref|YP_008796906.1|	-	0.0011	18.6	0.4	0.0017	18.0	0.3	1.3	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
ECR1_N	PF14382.1	gi|557693852|ref|YP_008796906.1|	-	0.0016	17.7	0.0	0.003	16.7	0.0	1.5	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
OrfB_Zn_ribbon	PF07282.6	gi|557693852|ref|YP_008796906.1|	-	0.021	14.4	2.0	0.037	13.6	1.4	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Baculo_ME53	PF06061.6	gi|557693852|ref|YP_008796906.1|	-	0.035	13.1	0.2	0.047	12.6	0.1	1.1	1	0	0	1	1	1	0	Baculoviridae	ME53
zinc_ribbon_2	PF13240.1	gi|557693852|ref|YP_008796906.1|	-	0.048	13.1	0.5	0.1	12.1	0.3	1.6	1	0	0	1	1	1	0	zinc-ribbon	domain
HypA	PF01155.14	gi|557693852|ref|YP_008796906.1|	-	0.11	12.1	0.2	0.21	11.2	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
PHD	PF00628.24	gi|557693852|ref|YP_008796906.1|	-	0.22	11.2	2.2	0.33	10.6	1.5	1.2	1	0	0	1	1	1	0	PHD-finger
RecR	PF02132.10	gi|557693852|ref|YP_008796906.1|	-	0.33	10.4	5.2	3.2	7.2	2.8	2.6	2	1	0	2	2	2	0	RecR	protein
zf-C2HC5	PF06221.8	gi|557693852|ref|YP_008796906.1|	-	0.47	10.2	2.8	0.93	9.3	1.9	1.4	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
TF_Zn_Ribbon	PF08271.7	gi|557693852|ref|YP_008796906.1|	-	0.77	9.1	5.8	0.78	9.1	0.2	2.5	1	1	0	1	1	1	0	TFIIB	zinc-binding
Auto_anti-p27	PF06677.7	gi|557693852|ref|YP_008796906.1|	-	6.4	6.6	5.8	1.4	8.7	1.7	1.7	2	0	0	2	2	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
RNA_pol_L_2	PF13656.1	gi|557693853|ref|YP_008796907.1|	-	1.2e-15	56.6	0.1	1.5e-15	56.3	0.1	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.19	gi|557693853|ref|YP_008796907.1|	-	7.2e-05	21.8	0.0	9.6e-05	21.4	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Topo-VIb_trans	PF09239.6	gi|557693853|ref|YP_008796907.1|	-	0.076	12.5	0.0	0.1	12.1	0.0	1.2	1	0	0	1	1	1	0	Topoisomerase	VI	B	subunit,	transducer
tRNA-synt_1_2	PF13603.1	gi|557693853|ref|YP_008796907.1|	-	0.096	11.9	0.0	0.1	11.9	0.0	1.1	1	0	0	1	1	1	0	Leucyl-tRNA	synthetase,	Domain	2
TFIIS_C	PF01096.13	gi|557693854|ref|YP_008796908.1|	-	1.3e-20	72.7	15.8	2.4e-20	71.8	3.6	3.1	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
Zn_Tnp_IS1595	PF12760.2	gi|557693854|ref|YP_008796908.1|	-	5e-09	35.8	8.1	6.1e-05	22.7	0.6	2.3	2	0	0	2	2	2	2	Transposase	zinc-ribbon	domain
DZR	PF12773.2	gi|557693854|ref|YP_008796908.1|	-	5.1e-07	29.4	8.0	0.0011	18.7	0.4	3.0	2	1	1	3	3	3	3	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|557693854|ref|YP_008796908.1|	-	1.1e-06	27.6	10.9	0.00027	20.0	0.7	3.4	3	1	0	3	3	3	2	zinc-ribbon	domain
DUF2387	PF09526.5	gi|557693854|ref|YP_008796908.1|	-	1.3e-06	28.2	5.7	0.0035	17.2	0.6	2.2	2	0	0	2	2	2	2	Probable	metal-binding	protein	(DUF2387)
RNA_POL_M_15KD	PF02150.11	gi|557693854|ref|YP_008796908.1|	-	7.2e-06	25.5	0.7	7.2e-06	25.5	0.5	3.1	3	1	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
zinc_ribbon_2	PF13240.1	gi|557693854|ref|YP_008796908.1|	-	0.00013	21.3	14.4	0.087	12.3	0.4	4.2	4	0	0	4	4	4	2	zinc-ribbon	domain
UPF0547	PF10571.4	gi|557693854|ref|YP_008796908.1|	-	0.00018	21.1	11.6	0.15	11.7	1.0	3.8	3	1	0	3	3	3	2	Uncharacterised	protein	family	UPF0547
zinc_ribbon_5	PF13719.1	gi|557693854|ref|YP_008796908.1|	-	0.00022	20.7	11.3	0.36	10.4	0.5	4.1	4	0	0	4	4	4	1	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|557693854|ref|YP_008796908.1|	-	0.00026	20.6	12.0	0.51	10.0	0.7	4.1	4	0	0	4	4	4	1	zinc-ribbon	domain
zf-TFIIB	PF13453.1	gi|557693854|ref|YP_008796908.1|	-	0.00044	19.3	0.9	0.00044	19.3	0.6	2.7	2	1	0	2	2	2	1	Transcription	factor	zinc-finger
OrfB_Zn_ribbon	PF07282.6	gi|557693854|ref|YP_008796908.1|	-	0.00074	19.1	9.5	0.093	12.4	0.9	2.6	2	1	0	2	2	2	2	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.7	gi|557693854|ref|YP_008796908.1|	-	0.0008	18.6	12.4	0.067	12.5	1.1	3.7	2	2	1	3	3	3	2	TFIIB	zinc-binding
PhnA_Zn_Ribbon	PF08274.7	gi|557693854|ref|YP_008796908.1|	-	0.0017	18.1	7.3	0.52	10.1	0.6	3.8	3	1	0	3	3	3	1	PhnA	Zinc-Ribbon
DUF2082	PF09855.4	gi|557693854|ref|YP_008796908.1|	-	0.0048	16.7	7.1	20	5.1	0.0	4.1	4	0	0	4	4	4	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Elf1	PF05129.8	gi|557693854|ref|YP_008796908.1|	-	0.0052	16.4	6.3	0.43	10.2	0.7	2.9	1	1	1	2	2	2	1	Transcription	elongation	factor	Elf1	like
DNA_RNApol_7kD	PF03604.8	gi|557693854|ref|YP_008796908.1|	-	0.0073	15.7	8.7	4.1	6.9	1.2	3.6	3	1	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Nudix_N_2	PF14803.1	gi|557693854|ref|YP_008796908.1|	-	0.012	15.2	13.7	0.65	9.7	3.3	3.8	3	1	0	3	3	3	0	Nudix	N-terminal
Prok-RING_1	PF14446.1	gi|557693854|ref|YP_008796908.1|	-	0.012	15.3	7.2	0.2	11.4	0.4	3.2	3	0	0	3	3	3	0	Prokaryotic	RING	finger	family	1
Sgf11	PF08209.6	gi|557693854|ref|YP_008796908.1|	-	0.013	14.7	8.8	1.5	8.2	0.0	3.9	4	0	0	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
Zn-ribbon_8	PF09723.5	gi|557693854|ref|YP_008796908.1|	-	0.019	14.9	15.1	1.8	8.5	0.1	4.0	3	1	0	3	3	3	0	Zinc	ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|557693854|ref|YP_008796908.1|	-	0.026	13.9	11.4	2.3	7.7	0.1	4.1	4	0	0	4	4	4	0	A2L	zinc	ribbon	domain
zf-C4pol	PF14260.1	gi|557693854|ref|YP_008796908.1|	-	0.043	13.8	1.8	0.97	9.4	0.1	2.4	1	1	1	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
zf-RING_3	PF14369.1	gi|557693854|ref|YP_008796908.1|	-	0.05	13.6	6.4	0.74	9.8	0.2	3.2	3	1	0	3	3	3	0	zinc-finger
IBR	PF01485.16	gi|557693854|ref|YP_008796908.1|	-	0.054	13.3	7.2	2.4	8.0	0.7	3.2	3	0	0	3	3	3	0	IBR	domain
zinc-ribbons_6	PF07191.7	gi|557693854|ref|YP_008796908.1|	-	0.057	13.2	4.5	1.1	9.1	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbons
HypA	PF01155.14	gi|557693854|ref|YP_008796908.1|	-	0.07	12.8	8.3	0.12	12.0	0.6	3.0	1	1	2	3	3	3	0	Hydrogenase	expression/synthesis	hypA	family
zf-IS66	PF13005.2	gi|557693854|ref|YP_008796908.1|	-	0.083	12.8	7.0	4.3	7.3	0.1	3.9	4	0	0	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
C1_1	PF00130.17	gi|557693854|ref|YP_008796908.1|	-	0.086	12.5	1.1	0.086	12.5	0.8	2.5	2	1	0	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-Mss51	PF13824.1	gi|557693854|ref|YP_008796908.1|	-	0.13	12.1	10.1	2.8	7.8	1.7	2.9	2	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Cys_rich_CPCC	PF14206.1	gi|557693854|ref|YP_008796908.1|	-	0.16	11.5	1.9	1.1	8.8	0.0	2.6	3	0	0	3	3	3	0	Cysteine-rich	CPCC
Lar_restr_allev	PF14354.1	gi|557693854|ref|YP_008796908.1|	-	0.25	11.6	9.6	2.3	8.5	0.7	2.7	1	1	0	2	2	2	0	Restriction	alleviation	protein	Lar
LIM	PF00412.17	gi|557693854|ref|YP_008796908.1|	-	0.26	11.3	4.9	0.91	9.6	0.2	2.8	3	0	0	3	3	3	0	LIM	domain
zf-RING_5	PF14634.1	gi|557693854|ref|YP_008796908.1|	-	0.39	10.4	10.0	51	3.7	0.1	3.3	2	1	0	2	2	2	0	zinc-RING	finger	domain
FYDLN_acid	PF09538.5	gi|557693854|ref|YP_008796908.1|	-	0.41	11.2	7.2	6	7.4	0.6	3.6	1	1	2	3	3	3	0	Protein	of	unknown	function	(FYDLN_acid)
NOB1_Zn_bind	PF08772.6	gi|557693854|ref|YP_008796908.1|	-	0.47	10.3	15.3	0.83	9.5	0.5	3.8	1	1	3	4	4	4	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF2296	PF10058.4	gi|557693854|ref|YP_008796908.1|	-	0.52	10.0	9.7	1.6	8.5	1.5	3.8	3	1	0	3	3	3	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-GRF	PF06839.7	gi|557693854|ref|YP_008796908.1|	-	0.61	10.0	6.4	0.21	11.5	0.4	2.7	3	0	0	3	3	3	0	GRF	zinc	finger
FdhE	PF04216.7	gi|557693854|ref|YP_008796908.1|	-	0.63	9.6	9.7	0.83	9.3	1.2	2.0	1	1	1	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
PolC_DP2	PF03833.8	gi|557693854|ref|YP_008796908.1|	-	0.88	7.1	4.5	0.45	8.1	0.5	1.8	1	1	1	2	2	2	0	DNA	polymerase	II	large	subunit	DP2
Rubredoxin	PF00301.15	gi|557693854|ref|YP_008796908.1|	-	0.95	9.3	12.3	7.4	6.5	0.2	4.1	4	0	0	4	4	4	0	Rubredoxin
Terminase_GpA	PF05876.7	gi|557693854|ref|YP_008796908.1|	-	0.97	7.7	7.5	0.29	9.4	2.9	1.7	1	1	0	2	2	2	0	Phage	terminase	large	subunit	(GpA)
zf-C3HC4_2	PF13923.1	gi|557693854|ref|YP_008796908.1|	-	1.2	9.2	7.1	20	5.3	0.1	3.5	3	1	0	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF3797	PF12677.2	gi|557693854|ref|YP_008796908.1|	-	1.9	8.1	9.3	13	5.5	0.1	3.9	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF3797)
Zn_ribbon_recom	PF13408.1	gi|557693854|ref|YP_008796908.1|	-	1.9	8.7	16.0	5	7.4	3.6	3.7	2	2	1	3	3	3	0	Recombinase	zinc	beta	ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|557693854|ref|YP_008796908.1|	-	1.9	8.1	15.7	0.56	9.8	2.6	3.7	3	1	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
zf-ISL3	PF14690.1	gi|557693854|ref|YP_008796908.1|	-	2.4	8.2	13.1	8.3	6.5	0.0	4.2	4	1	0	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Baculo_LEF5_C	PF11792.3	gi|557693854|ref|YP_008796908.1|	-	2.4	7.5	11.6	0.063	12.6	0.8	3.1	3	1	0	3	3	3	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
zf-NADH-PPase	PF09297.6	gi|557693854|ref|YP_008796908.1|	-	2.5	7.7	17.3	2.1	7.8	0.1	3.6	3	1	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
RRN7	PF11781.3	gi|557693854|ref|YP_008796908.1|	-	2.7	7.5	14.9	6.5	6.3	1.6	3.8	3	1	0	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
zf-CHY	PF05495.7	gi|557693854|ref|YP_008796908.1|	-	2.8	8.1	7.0	5.1e+02	0.9	4.8	2.7	1	1	0	1	1	1	0	CHY	zinc	finger
zf-C2H2_4	PF13894.1	gi|557693854|ref|YP_008796908.1|	-	3.1	8.3	10.3	20	5.8	0.3	3.9	4	0	0	4	4	4	0	C2H2-type	zinc	finger
ADK_lid	PF05191.9	gi|557693854|ref|YP_008796908.1|	-	3.8	7.2	10.1	31	4.3	0.1	3.9	4	0	0	4	4	4	0	Adenylate	kinase,	active	site	lid
zf-AN1	PF01428.11	gi|557693854|ref|YP_008796908.1|	-	4	7.4	6.9	32	4.4	0.6	3.3	3	1	0	3	3	3	0	AN1-like	Zinc	finger
zf-RING_4	PF14570.1	gi|557693854|ref|YP_008796908.1|	-	4.2	7.0	7.6	27	4.4	0.7	3.4	3	1	0	3	3	3	0	RING/Ubox	like	zinc-binding	domain
Ribosomal_L32p	PF01783.18	gi|557693854|ref|YP_008796908.1|	-	5.6	7.2	7.2	23	5.2	0.0	3.5	2	1	1	3	3	3	0	Ribosomal	L32p	protein	family
GFA	PF04828.9	gi|557693854|ref|YP_008796908.1|	-	5.6	6.9	11.2	9.3	6.2	0.5	3.5	1	1	2	3	3	3	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-LITAF-like	PF10601.4	gi|557693854|ref|YP_008796908.1|	-	6.2	6.7	6.9	26	4.7	0.1	3.4	4	0	0	4	4	4	0	LITAF-like	zinc	ribbon	domain
RNHCP	PF12647.2	gi|557693854|ref|YP_008796908.1|	-	7.3	6.5	8.6	41	4.0	2.4	2.9	1	1	1	2	2	2	0	RNHCP	domain
zf-H2C2_2	PF13465.1	gi|557693854|ref|YP_008796908.1|	-	9.5	6.7	10.7	26	5.3	0.5	3.9	4	0	0	4	4	4	0	Zinc-finger	double	domain
HTH_3	PF01381.17	gi|557693855|ref|YP_008796909.1|	-	0.0049	16.6	0.0	0.01	15.6	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix
HTH_26	PF13443.1	gi|557693855|ref|YP_008796909.1|	-	0.016	15.4	0.1	0.035	14.2	0.0	1.5	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
Pribosyltran	PF00156.22	gi|557693855|ref|YP_008796909.1|	-	0.054	13.2	0.1	0.16	11.7	0.0	1.8	2	0	0	2	2	2	0	Phosphoribosyl	transferase	domain
RHH_3	PF12651.2	gi|557693855|ref|YP_008796909.1|	-	0.093	12.4	0.1	0.22	11.3	0.1	1.7	1	1	0	1	1	1	0	Ribbon-helix-helix	domain
Ald_Xan_dh_C2	PF02738.13	gi|557693856|ref|YP_008796910.1|	-	3.7e-133	444.7	0.0	5.1e-133	444.2	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557693856|ref|YP_008796910.1|	-	6.4e-28	97.0	0.4	1.3e-27	96.0	0.3	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Fer2_2	PF01799.15	gi|557693857|ref|YP_008796911.1|	-	2.1e-27	94.7	0.1	3.8e-27	93.9	0.1	1.4	1	0	0	1	1	1	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|557693857|ref|YP_008796911.1|	-	9.9e-07	28.4	2.4	1.1e-06	28.3	0.3	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|557693857|ref|YP_008796911.1|	-	0.0019	17.9	0.5	0.0026	17.5	0.4	1.4	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
SUI1	PF01253.17	gi|557693857|ref|YP_008796911.1|	-	0.11	12.3	0.5	0.35	10.7	0.0	2.0	1	1	1	2	2	2	0	Translation	initiation	factor	SUI1
DHODB_Fe-S_bind	PF10418.4	gi|557693857|ref|YP_008796911.1|	-	7.2	6.1	11.1	0.2	11.1	3.1	1.8	2	0	0	2	2	2	0	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
FAD_binding_5	PF00941.16	gi|557693858|ref|YP_008796912.1|	-	7.2e-27	93.9	0.0	1.1e-26	93.3	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|557693858|ref|YP_008796912.1|	-	8.3e-16	57.8	0.1	1.3e-15	57.1	0.0	1.2	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
DUF554	PF04474.7	gi|557693858|ref|YP_008796912.1|	-	0.068	12.3	0.0	0.11	11.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF554)
Amidohydro_4	PF13147.1	gi|557693859|ref|YP_008796913.1|	-	8.2e-29	101.4	0.0	1e-28	101.1	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|557693859|ref|YP_008796913.1|	-	1.4e-14	53.6	0.8	4.2e-14	52.1	0.3	2.1	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|557693859|ref|YP_008796913.1|	-	1.7e-14	54.2	0.0	4.3e-13	49.6	0.0	2.2	1	1	0	1	1	1	1	Amidohydrolase	family
Urease_alpha	PF00449.15	gi|557693859|ref|YP_008796913.1|	-	4e-06	26.9	0.2	8.3e-06	25.9	0.1	1.5	1	0	0	1	1	1	1	Urease	alpha-subunit,	N-terminal	domain
Amidohydro_3	PF07969.6	gi|557693859|ref|YP_008796913.1|	-	9.9e-06	25.0	0.3	0.0015	17.7	0.0	2.6	2	1	1	3	3	3	2	Amidohydrolase	family
Memo	PF01875.12	gi|557693860|ref|YP_008796914.1|	-	2.9e-77	259.2	0.0	3.3e-77	259.0	0.0	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.13	gi|557693860|ref|YP_008796914.1|	-	1.8e-05	23.8	0.0	7.9e-05	21.7	0.0	1.9	1	1	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
GHMP_kinases_N	PF00288.21	gi|557693861|ref|YP_008796915.1|	-	6.4e-17	61.3	0.2	1.3e-16	60.3	0.2	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|557693861|ref|YP_008796915.1|	-	7e-17	61.4	1.5	1.6e-16	60.2	0.1	2.1	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
GalKase_gal_bdg	PF10509.4	gi|557693861|ref|YP_008796915.1|	-	0.00047	19.3	0.0	0.001	18.2	0.0	1.6	1	0	0	1	1	1	1	Galactokinase	galactose-binding	signature
AA_kinase	PF00696.23	gi|557693862|ref|YP_008796916.1|	-	1.8e-42	145.5	0.4	2e-42	145.3	0.3	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
FMN_dh	PF01070.13	gi|557693863|ref|YP_008796917.1|	-	8.1e-36	123.5	0.0	9.8e-27	93.7	0.0	2.0	1	1	1	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|557693863|ref|YP_008796917.1|	-	4.2e-07	29.1	6.3	7.4e-06	25.0	1.6	3.0	3	1	1	4	4	4	2	IMP	dehydrogenase	/	GMP	reductase	domain
Glu_synthase	PF01645.12	gi|557693863|ref|YP_008796917.1|	-	0.00021	20.3	2.3	0.00061	18.8	1.6	1.7	1	1	0	1	1	1	1	Conserved	region	in	glutamate	synthase
DHO_dh	PF01180.16	gi|557693863|ref|YP_008796917.1|	-	0.00033	19.7	0.1	0.00067	18.6	0.0	1.6	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
DUF561	PF04481.7	gi|557693863|ref|YP_008796917.1|	-	0.0015	17.5	0.0	0.0053	15.7	0.0	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF561)
NMO	PF03060.10	gi|557693863|ref|YP_008796917.1|	-	0.0028	16.8	1.3	0.0068	15.5	0.3	2.0	2	0	0	2	2	2	1	Nitronate	monooxygenase
His_biosynth	PF00977.16	gi|557693863|ref|YP_008796917.1|	-	0.077	12.2	0.4	0.74	9.0	0.1	2.3	1	1	2	3	3	3	0	Histidine	biosynthesis	protein
ThiG	PF05690.9	gi|557693863|ref|YP_008796917.1|	-	0.45	9.5	5.0	5.3	6.0	0.1	2.8	1	1	2	3	3	3	0	Thiazole	biosynthesis	protein	ThiG
tRNA-synt_1c	PF00749.16	gi|557693864|ref|YP_008796918.1|	-	1.3e-70	237.5	0.0	1.7e-70	237.2	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|557693864|ref|YP_008796918.1|	-	6.8e-28	97.4	0.0	1.2e-27	96.7	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
Ribosomal_L7Ae	PF01248.21	gi|557693865|ref|YP_008796919.1|	-	2.2e-30	104.0	0.1	2.6e-30	103.7	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNase_P_pop3	PF08228.6	gi|557693865|ref|YP_008796919.1|	-	0.011	15.5	0.0	0.013	15.3	0.0	1.1	1	0	0	1	1	1	0	RNase	P	subunit	Pop3
RRF	PF01765.14	gi|557693865|ref|YP_008796919.1|	-	0.018	14.5	0.1	0.22	10.9	0.0	2.0	1	1	1	2	2	2	0	Ribosome	recycling	factor
Ribosomal_S28e	PF01200.13	gi|557693866|ref|YP_008796920.1|	-	2.9e-30	103.8	2.9	2.9e-30	103.8	2.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S28e
Biotin_lipoyl_2	PF13533.1	gi|557693866|ref|YP_008796920.1|	-	0.94	9.1	5.5	2.7	7.7	0.1	3.1	2	2	0	2	2	2	0	Biotin-lipoyl	like
Ribosomal_L24e	PF01246.15	gi|557693867|ref|YP_008796921.1|	-	1.4e-16	60.0	1.1	1.6e-16	59.9	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|557693867|ref|YP_008796921.1|	-	2.8e-05	23.6	2.2	4.5e-05	23.0	1.6	1.3	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
zf-C2H2_6	PF13912.1	gi|557693867|ref|YP_008796921.1|	-	0.0097	15.7	0.4	0.019	14.8	0.3	1.5	1	0	0	1	1	1	1	C2H2-type	zinc	finger
DUF581	PF04570.9	gi|557693867|ref|YP_008796921.1|	-	0.011	15.0	2.5	0.023	13.9	1.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF581)
zf-C4_ClpX	PF06689.8	gi|557693867|ref|YP_008796921.1|	-	0.013	14.9	0.1	0.013	14.9	0.0	1.6	2	0	0	2	2	2	0	ClpX	C4-type	zinc	finger
CpXC	PF14353.1	gi|557693867|ref|YP_008796921.1|	-	0.022	14.7	0.1	0.028	14.3	0.0	1.3	1	1	0	1	1	1	0	CpXC	protein
DUF2175	PF09943.4	gi|557693867|ref|YP_008796921.1|	-	0.13	12.2	0.6	0.13	12.3	0.4	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
zf-H2C2_2	PF13465.1	gi|557693867|ref|YP_008796921.1|	-	0.35	11.2	0.4	0.35	11.2	0.3	1.9	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF329	PF03884.9	gi|557693867|ref|YP_008796921.1|	-	1	9.0	3.4	6.8	6.3	2.4	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
NDK	PF00334.14	gi|557693868|ref|YP_008796922.1|	-	4.5e-50	168.9	0.0	5e-50	168.7	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
DUF2840	PF11000.3	gi|557693868|ref|YP_008796922.1|	-	0.13	11.7	0.0	0.19	11.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2840)
GTP_EFTU	PF00009.22	gi|557693869|ref|YP_008796923.1|	-	3.5e-37	127.6	0.0	5.5e-37	127.0	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|557693869|ref|YP_008796923.1|	-	3.8e-23	81.3	0.3	7.2e-23	80.4	0.2	1.5	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|557693869|ref|YP_008796923.1|	-	4.7e-07	29.8	2.9	5.9e-07	29.5	0.5	2.3	2	1	1	3	3	3	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|557693869|ref|YP_008796923.1|	-	0.00039	20.3	0.0	0.00078	19.3	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
ArgK	PF03308.11	gi|557693869|ref|YP_008796923.1|	-	0.0066	15.2	0.0	0.023	13.4	0.0	1.8	2	0	0	2	2	2	1	ArgK	protein
DUF1250	PF06855.7	gi|557693869|ref|YP_008796923.1|	-	0.03	13.8	0.0	0.07	12.6	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1250)
Fcf1	PF04900.7	gi|557693870|ref|YP_008796924.1|	-	0.006	16.6	0.0	0.0078	16.2	0.0	1.1	1	0	0	1	1	1	1	Fcf1
PIN_4	PF13638.1	gi|557693870|ref|YP_008796924.1|	-	0.084	12.9	0.0	0.093	12.8	0.0	1.2	1	0	0	1	1	1	0	PIN	domain
SHS2_Rpb7-N	PF03876.12	gi|557693871|ref|YP_008796925.1|	-	1.5e-14	53.8	0.0	2.5e-14	53.1	0.0	1.4	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.18	gi|557693871|ref|YP_008796925.1|	-	2.7e-14	53.0	0.2	6.8e-14	51.7	0.2	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
Spt4	PF06093.8	gi|557693872|ref|YP_008796926.1|	-	8.3e-14	51.2	0.3	9.9e-14	50.9	0.2	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
Laminin_EGF	PF00053.19	gi|557693872|ref|YP_008796926.1|	-	0.0084	16.0	0.9	0.011	15.6	0.6	1.2	1	0	0	1	1	1	1	Laminin	EGF-like	(Domains	III	and	V)
DUF359	PF04019.7	gi|557693873|ref|YP_008796927.1|	-	8.8e-31	105.8	0.5	1.2e-30	105.3	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
Ribosomal_S27	PF01599.14	gi|557693874|ref|YP_008796928.1|	-	3.3e-14	52.4	2.3	3.8e-14	52.2	1.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27a
Zn_Tnp_IS1595	PF12760.2	gi|557693874|ref|YP_008796928.1|	-	0.00026	20.7	1.1	0.00036	20.2	0.7	1.4	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
IBR	PF01485.16	gi|557693874|ref|YP_008796928.1|	-	0.0025	17.6	0.1	0.0027	17.5	0.1	1.1	1	0	0	1	1	1	1	IBR	domain
TF_Zn_Ribbon	PF08271.7	gi|557693874|ref|YP_008796928.1|	-	0.0026	17.0	3.4	0.0038	16.5	2.3	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
GCC2_GCC3	PF07699.8	gi|557693874|ref|YP_008796928.1|	-	0.0026	17.2	0.8	0.0033	16.9	0.6	1.1	1	0	0	1	1	1	1	GCC2	and	GCC3
Ribosomal_L37e	PF01907.14	gi|557693874|ref|YP_008796928.1|	-	0.0051	16.5	3.0	0.007	16.1	2.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L37e
OrfB_Zn_ribbon	PF07282.6	gi|557693874|ref|YP_008796928.1|	-	0.018	14.7	1.8	0.058	13.0	1.2	1.6	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Nudix_N_2	PF14803.1	gi|557693874|ref|YP_008796928.1|	-	0.024	14.3	3.0	0.1	12.2	0.1	2.1	2	0	0	2	2	2	0	Nudix	N-terminal
zf-ribbon_3	PF13248.1	gi|557693874|ref|YP_008796928.1|	-	0.032	13.4	2.8	1.3	8.3	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|557693874|ref|YP_008796928.1|	-	0.039	13.4	2.3	2.7	7.5	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1936	PF09151.5	gi|557693874|ref|YP_008796928.1|	-	0.048	13.1	2.4	0.29	10.6	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
Tnp_zf-ribbon_2	PF13842.1	gi|557693874|ref|YP_008796928.1|	-	0.05	14.0	0.8	1.6	9.1	0.0	2.1	2	0	0	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
DUF1610	PF07754.6	gi|557693874|ref|YP_008796928.1|	-	0.067	13.3	6.8	0.16	12.0	0.6	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
A2L_zn_ribbon	PF08792.5	gi|557693874|ref|YP_008796928.1|	-	0.077	12.4	1.0	0.79	9.2	0.1	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-HYPF	PF07503.7	gi|557693874|ref|YP_008796928.1|	-	0.092	12.1	0.8	0.48	9.8	0.0	2.1	2	0	0	2	2	2	0	HypF	finger
Rubredoxin	PF00301.15	gi|557693874|ref|YP_008796928.1|	-	0.093	12.6	2.0	5.2	7.0	0.0	2.2	2	0	0	2	2	2	0	Rubredoxin
DZR	PF12773.2	gi|557693874|ref|YP_008796928.1|	-	0.096	12.5	1.6	0.15	11.8	1.1	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_4	PF13717.1	gi|557693874|ref|YP_008796928.1|	-	0.1	12.2	3.6	2.2	8.0	2.3	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|557693874|ref|YP_008796928.1|	-	0.11	12.0	3.6	1.9	8.1	2.3	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.14	gi|557693874|ref|YP_008796928.1|	-	0.12	12.0	0.1	0.13	11.9	0.1	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-DNL	PF05180.7	gi|557693874|ref|YP_008796928.1|	-	0.13	12.0	1.4	3.5	7.4	0.0	2.1	1	1	1	2	2	2	0	DNL	zinc	finger
zf-CCHC_5	PF14787.1	gi|557693874|ref|YP_008796928.1|	-	0.18	11.3	1.1	0.49	9.9	0.0	2.0	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
Zn-ribbon_8	PF09723.5	gi|557693874|ref|YP_008796928.1|	-	0.19	11.7	3.2	4.6	7.2	0.0	2.1	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-H2C2_2	PF13465.1	gi|557693874|ref|YP_008796928.1|	-	0.19	12.0	1.2	1.9	8.9	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
Lar_restr_allev	PF14354.1	gi|557693874|ref|YP_008796928.1|	-	0.2	11.9	1.6	0.33	11.2	1.1	1.6	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-ISL3	PF14690.1	gi|557693874|ref|YP_008796928.1|	-	0.25	11.3	5.8	0.42	10.6	0.3	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-HIT	PF04438.11	gi|557693874|ref|YP_008796928.1|	-	0.31	10.7	6.4	3.4	7.3	0.1	2.2	2	0	0	2	2	2	0	HIT	zinc	finger
ADK_lid	PF05191.9	gi|557693874|ref|YP_008796928.1|	-	0.33	10.6	4.6	6.5	6.5	0.2	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
DUF2082	PF09855.4	gi|557693874|ref|YP_008796928.1|	-	0.35	10.7	3.6	3	7.7	0.5	2.1	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Auto_anti-p27	PF06677.7	gi|557693874|ref|YP_008796928.1|	-	0.37	10.5	3.5	1.4	8.7	2.4	2.0	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TFIIS_C	PF01096.13	gi|557693874|ref|YP_008796928.1|	-	0.4	10.3	2.6	9.9	5.8	0.4	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-Mss51	PF13824.1	gi|557693874|ref|YP_008796928.1|	-	0.46	10.3	4.2	2.6	7.9	0.2	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-C2H2_3	PF13878.1	gi|557693874|ref|YP_008796928.1|	-	0.65	9.6	4.3	3.5	7.2	0.1	2.1	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
FeS	PF04060.8	gi|557693874|ref|YP_008796928.1|	-	0.96	9.0	3.9	0.62	9.6	0.6	1.9	2	0	0	2	2	2	0	Putative	Fe-S	cluster
DNA_RNApol_7kD	PF03604.8	gi|557693874|ref|YP_008796928.1|	-	1.1	8.8	5.2	9.5	5.7	1.3	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C2H2	PF00096.21	gi|557693874|ref|YP_008796928.1|	-	2.9	8.3	5.8	6.6	7.2	1.2	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Zn_Tnp_IS1	PF03811.8	gi|557693874|ref|YP_008796928.1|	-	5.3	6.6	7.6	1.5e+02	1.9	5.2	2.4	1	1	0	1	1	1	0	InsA	N-terminal	domain
Ribosomal_S24e	PF01282.14	gi|557693875|ref|YP_008796929.1|	-	6.3e-15	54.7	0.1	1e-14	54.0	0.0	1.4	1	1	0	1	1	1	1	Ribosomal	protein	S24e
SAICAR_synt	PF01259.13	gi|557693875|ref|YP_008796929.1|	-	0.027	13.5	0.0	0.031	13.3	0.0	1.1	1	0	0	1	1	1	0	SAICAR	synthetase
Ribosomal_S6e	PF01092.14	gi|557693876|ref|YP_008796930.1|	-	4.2e-33	113.6	4.8	1.8e-29	101.9	3.4	2.0	1	1	0	1	1	1	1	Ribosomal	protein	S6e
GTP_EFTU	PF00009.22	gi|557693877|ref|YP_008796931.1|	-	1.3e-29	102.9	0.0	3.6e-26	91.7	0.0	2.4	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
IF-2	PF11987.3	gi|557693877|ref|YP_008796931.1|	-	4.9e-17	61.7	0.5	1.4e-16	60.3	0.3	1.8	1	0	0	1	1	1	1	Translation-initiation	factor	2
GTP_EFTU_D4	PF14578.1	gi|557693877|ref|YP_008796931.1|	-	2.4e-16	59.1	3.1	2.4e-16	59.1	2.2	2.4	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	4
GTP_EFTU_D2	PF03144.20	gi|557693877|ref|YP_008796931.1|	-	3.9e-06	26.8	7.5	0.00019	21.4	0.0	3.5	3	0	0	3	3	3	2	Elongation	factor	Tu	domain	2
PT-HINT	PF07591.6	gi|557693877|ref|YP_008796931.1|	-	0.00024	20.9	0.0	0.00076	19.3	0.0	1.9	1	0	0	1	1	1	1	Pretoxin	HINT	domain
ATP_bind_1	PF03029.12	gi|557693877|ref|YP_008796931.1|	-	0.016	14.7	0.0	0.031	13.8	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
MMR_HSR1	PF01926.18	gi|557693877|ref|YP_008796931.1|	-	0.018	14.9	0.0	0.066	13.1	0.0	2.0	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
SBDS_C	PF09377.5	gi|557693877|ref|YP_008796931.1|	-	0.033	13.8	0.1	0.3	10.8	0.0	2.4	3	0	0	3	3	3	0	SBDS	protein	C-terminal	domain
Peptidase_M22	PF00814.20	gi|557693878|ref|YP_008796932.1|	-	3.4e-77	259.5	0.1	4e-77	259.3	0.1	1.0	1	0	0	1	1	1	1	Glycoprotease	family
BcrAD_BadFG	PF01869.15	gi|557693878|ref|YP_008796932.1|	-	0.00077	18.8	0.0	0.013	14.8	0.0	2.1	1	1	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
Ketoacyl-synt_C	PF02801.17	gi|557693878|ref|YP_008796932.1|	-	0.05	13.4	0.1	0.098	12.4	0.0	1.4	1	0	0	1	1	1	0	Beta-ketoacyl	synthase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|557693878|ref|YP_008796932.1|	-	0.096	12.1	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	Beta-ketoacyl	synthase,	N-terminal	domain
Pkinase	PF00069.20	gi|557693879|ref|YP_008796933.1|	-	1.2e-09	37.6	0.0	1.8e-09	37.1	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|557693879|ref|YP_008796933.1|	-	3.6e-09	36.6	2.0	3.9e-05	23.5	0.1	2.2	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
RIO1	PF01163.17	gi|557693879|ref|YP_008796933.1|	-	1e-08	34.7	0.0	1.5e-08	34.1	0.0	1.3	1	0	0	1	1	1	1	RIO1	family
Kdo	PF06293.9	gi|557693879|ref|YP_008796933.1|	-	2.6e-07	29.9	0.0	2.7e-06	26.6	0.0	2.0	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
DUF4135	PF13575.1	gi|557693879|ref|YP_008796933.1|	-	0.00071	18.6	0.0	0.00079	18.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4135)
Pkinase_Tyr	PF07714.12	gi|557693879|ref|YP_008796933.1|	-	0.00087	18.4	0.0	0.0016	17.5	0.0	1.6	1	1	0	1	1	1	1	Protein	tyrosine	kinase
APH_6_hur	PF04655.9	gi|557693879|ref|YP_008796933.1|	-	0.019	14.1	0.0	0.03	13.4	0.0	1.4	1	0	0	1	1	1	0	Aminoglycoside/hydroxyurea	antibiotic	resistance	kinase
Ham1p_like	PF01725.11	gi|557693880|ref|YP_008796934.1|	-	1.2e-48	164.9	0.0	1.4e-48	164.8	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
Ribosomal_S13_N	PF08069.7	gi|557693881|ref|YP_008796935.1|	-	2.5e-28	97.6	0.4	4.6e-28	96.8	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.17	gi|557693881|ref|YP_008796935.1|	-	1.3e-17	63.3	0.4	1.8e-17	62.8	0.3	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S15
NUDIX_2	PF13869.1	gi|557693881|ref|YP_008796935.1|	-	0.033	13.5	0.1	0.11	11.8	0.0	1.7	1	1	1	2	2	2	0	Nucleotide	hydrolase
DHHA1	PF02272.14	gi|557693882|ref|YP_008796936.1|	-	3.3e-14	52.3	2.2	5.6e-14	51.5	0.7	2.1	2	0	0	2	2	2	1	DHHA1	domain
DHH	PF01368.15	gi|557693882|ref|YP_008796936.1|	-	2.8e-09	36.7	0.0	5.5e-09	35.8	0.0	1.4	1	0	0	1	1	1	1	DHH	family
VitK2_biosynth	PF02621.9	gi|557693882|ref|YP_008796936.1|	-	0.047	12.8	0.0	0.081	12.1	0.0	1.3	1	0	0	1	1	1	0	Menaquinone	biosynthesis
Pcc1	PF09341.5	gi|557693883|ref|YP_008796937.1|	-	0.0013	18.7	0.1	0.0015	18.4	0.0	1.2	1	0	0	1	1	1	1	Transcription	factor	Pcc1
Ribosomal_S3Ae	PF01015.13	gi|557693884|ref|YP_008796938.1|	-	1.1e-58	197.7	0.5	1.3e-58	197.5	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
DUF2095	PF09868.4	gi|557693885|ref|YP_008796939.1|	-	1.9e-26	92.3	0.6	2.5e-26	91.9	0.4	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2095)
FtsK_SpoIIIE	PF01580.13	gi|557693885|ref|YP_008796939.1|	-	0.021	14.3	0.5	0.022	14.2	0.3	1.1	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
SHOCT	PF09851.4	gi|557693885|ref|YP_008796939.1|	-	5.6	6.5	6.3	3.8	7.1	0.1	2.7	3	0	0	3	3	3	0	Short	C-terminal	domain
MMR_HSR1_C	PF08438.5	gi|557693886|ref|YP_008796940.1|	-	1.7e-34	118.3	0.1	2.9e-34	117.5	0.0	1.4	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|557693886|ref|YP_008796940.1|	-	5.9e-19	68.1	0.0	1.4e-18	66.9	0.0	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|557693886|ref|YP_008796940.1|	-	2.2e-08	33.7	0.0	4.5e-08	32.8	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|557693886|ref|YP_008796940.1|	-	3e-08	33.0	0.6	8.7e-07	28.3	0.1	2.7	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|557693886|ref|YP_008796940.1|	-	0.0019	17.6	0.1	1.5	8.2	0.0	2.7	2	1	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
Miro	PF08477.8	gi|557693886|ref|YP_008796940.1|	-	0.0093	16.4	0.0	0.033	14.6	0.0	2.0	2	0	0	2	2	2	1	Miro-like	protein
ATP_bind_1	PF03029.12	gi|557693886|ref|YP_008796940.1|	-	0.01	15.3	0.0	0.68	9.4	0.0	2.5	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
MobB	PF03205.9	gi|557693886|ref|YP_008796940.1|	-	0.073	12.7	0.1	0.17	11.5	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_21	PF13304.1	gi|557693886|ref|YP_008796940.1|	-	0.093	12.6	0.2	0.14	12.0	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
Dynamin_N	PF00350.18	gi|557693886|ref|YP_008796940.1|	-	0.12	12.1	0.2	13	5.5	0.0	2.4	1	1	1	2	2	2	0	Dynamin	family
Ribosomal_L15e	PF00827.12	gi|557693887|ref|YP_008796941.1|	-	1.2e-42	145.5	3.8	1.3e-42	145.4	2.6	1.0	1	0	0	1	1	1	1	Ribosomal	L15
DNA_pol3_theta	PF06440.6	gi|557693887|ref|YP_008796941.1|	-	0.058	12.9	0.6	0.12	12.0	0.4	1.5	1	0	0	1	1	1	0	DNA	polymerase	III,	theta	subunit
DUF3106	PF11304.3	gi|557693887|ref|YP_008796941.1|	-	0.19	12.1	4.4	0.18	12.2	2.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3106)
RNA_binding	PF01877.12	gi|557693888|ref|YP_008796942.1|	-	7.6e-17	61.4	0.0	1.1e-16	60.8	0.0	1.3	1	1	0	1	1	1	1	RNA	binding
RNase_P_p30	PF01876.11	gi|557693889|ref|YP_008796943.1|	-	0.013	14.7	0.0	0.038	13.2	0.0	1.7	1	1	0	1	1	1	0	RNase	P	subunit	p30
RNase_P_Rpp14	PF01900.14	gi|557693890|ref|YP_008796944.1|	-	3.5e-08	33.3	0.2	4.9e-08	32.8	0.1	1.3	1	0	0	1	1	1	1	Rpp14/Pop5	family
Abi	PF02517.11	gi|557693891|ref|YP_008796945.1|	-	7.3e-14	51.6	4.3	7.3e-14	51.6	3.0	2.9	1	1	1	2	2	2	1	CAAX	protease	self-immunity
TatC	PF00902.13	gi|557693892|ref|YP_008796946.1|	-	2.2e-36	125.3	22.0	2.9e-36	124.9	15.2	1.2	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
zinc_ribbon_2	PF13240.1	gi|557693892|ref|YP_008796946.1|	-	0.00011	21.5	4.9	0.00016	21.0	3.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|557693892|ref|YP_008796946.1|	-	0.014	14.5	3.7	0.024	13.8	2.6	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
DZR	PF12773.2	gi|557693892|ref|YP_008796946.1|	-	0.019	14.8	0.8	0.027	14.2	0.6	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF4006	PF13179.1	gi|557693892|ref|YP_008796946.1|	-	7.5	6.1	6.1	1.1	8.8	0.6	2.3	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF4006)
MttA_Hcf106	PF02416.11	gi|557693893|ref|YP_008796947.1|	-	5.8e-15	54.1	1.1	7.6e-14	50.5	0.4	2.1	2	0	0	2	2	2	1	mttA/Hcf106	family
HK97-gp10_like	PF04883.7	gi|557693893|ref|YP_008796947.1|	-	0.3	12.0	1.6	0.39	11.6	1.1	1.2	1	0	0	1	1	1	0	Bacteriophage	HK97-gp10,	putative	tail-component
adh_short_C2	PF13561.1	gi|557693894|ref|YP_008796948.1|	-	4.6e-30	105.1	0.0	5.6e-30	104.8	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|557693894|ref|YP_008796948.1|	-	3.5e-26	92.0	0.2	4.7e-26	91.6	0.1	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|557693894|ref|YP_008796948.1|	-	3e-12	46.5	0.1	4.5e-12	46.0	0.1	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|557693894|ref|YP_008796948.1|	-	5.2e-07	29.3	0.2	1e-06	28.4	0.2	1.6	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|557693894|ref|YP_008796948.1|	-	0.0057	16.6	0.6	0.022	14.7	0.1	2.1	2	1	0	2	2	2	1	NADH(P)-binding
NmrA	PF05368.8	gi|557693894|ref|YP_008796948.1|	-	0.0076	15.5	0.1	0.095	11.9	0.0	2.2	2	0	0	2	2	2	1	NmrA-like	family
F420_oxidored	PF03807.12	gi|557693894|ref|YP_008796948.1|	-	0.091	13.1	0.0	0.19	12.1	0.0	1.6	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Ribosomal_S13	PF00416.17	gi|557693895|ref|YP_008796949.1|	-	1.8e-30	105.5	0.1	2.2e-30	105.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
U-box	PF04564.10	gi|557693895|ref|YP_008796949.1|	-	0.063	13.2	0.0	0.17	11.8	0.0	1.7	2	0	0	2	2	2	0	U-box	domain
Meth_synt_2	PF01717.13	gi|557693896|ref|YP_008796950.1|	-	2.9e-28	98.7	0.0	2.1e-27	95.9	0.0	2.1	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|557693896|ref|YP_008796950.1|	-	2e-06	27.2	0.0	2.9e-06	26.8	0.0	1.2	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_1	PF08267.7	gi|557693897|ref|YP_008796951.1|	-	1.2e-31	110.1	0.0	1.4e-27	96.8	0.0	2.0	1	1	1	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.13	gi|557693897|ref|YP_008796951.1|	-	2.2e-20	72.8	0.0	2.6e-20	72.6	0.0	1.0	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Pyr_redox_2	PF07992.9	gi|557693898|ref|YP_008796952.1|	-	1.2e-23	84.0	0.1	1.4e-23	83.8	0.0	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|557693898|ref|YP_008796952.1|	-	3.1e-15	56.7	0.0	2e-12	47.5	0.0	2.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|557693898|ref|YP_008796952.1|	-	1.5e-13	50.9	0.3	4.1e-09	36.7	0.1	3.4	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|557693898|ref|YP_008796952.1|	-	3.7e-09	35.9	0.0	2.8e-06	26.5	0.0	2.9	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
DAO	PF01266.19	gi|557693898|ref|YP_008796952.1|	-	4.3e-09	35.7	0.9	0.0018	17.2	0.0	2.7	2	1	0	3	3	3	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|557693898|ref|YP_008796952.1|	-	1.2e-06	27.2	0.0	0.0018	16.8	0.0	3.0	3	0	0	3	3	3	2	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|557693898|ref|YP_008796952.1|	-	5e-06	25.6	0.1	0.27	10.0	0.0	3.8	4	0	0	4	4	4	2	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|557693898|ref|YP_008796952.1|	-	3.3e-05	23.8	0.0	9.3e-05	22.3	0.0	1.8	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|557693898|ref|YP_008796952.1|	-	4.3e-05	22.7	0.0	0.00059	18.9	0.0	2.3	2	0	0	2	2	2	1	Thi4	family
FMO-like	PF00743.14	gi|557693898|ref|YP_008796952.1|	-	0.00045	18.5	0.0	0.0007	17.9	0.0	1.2	1	0	0	1	1	1	1	Flavin-binding	monooxygenase-like
FAD_oxidored	PF12831.2	gi|557693898|ref|YP_008796952.1|	-	0.0023	17.0	0.0	0.0041	16.2	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|557693898|ref|YP_008796952.1|	-	0.023	14.9	0.0	0.059	13.6	0.0	1.8	1	0	0	1	1	1	0	Putative	NAD(P)-binding
IlvN	PF07991.7	gi|557693898|ref|YP_008796952.1|	-	0.041	13.2	0.0	0.15	11.4	0.0	1.9	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
GIDA	PF01134.17	gi|557693898|ref|YP_008796952.1|	-	0.045	12.5	0.0	1	8.1	0.0	2.6	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.1	gi|557693898|ref|YP_008796952.1|	-	0.087	12.5	0.8	9	6.0	0.0	3.0	3	1	1	4	4	4	0	FAD-NAD(P)-binding
FAD_binding_3	PF01494.14	gi|557693898|ref|YP_008796952.1|	-	0.17	10.8	0.2	1.4	7.9	0.0	2.4	3	0	0	3	3	3	0	FAD	binding	domain
Antitoxin-MazE	PF04014.13	gi|557693899|ref|YP_008796953.1|	-	7.3e-11	41.5	0.0	1.5e-10	40.5	0.0	1.6	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
PhoU	PF01895.14	gi|557693899|ref|YP_008796953.1|	-	7.7e-10	39.0	0.9	2.9e-09	37.2	0.4	2.0	2	0	0	2	2	2	1	PhoU	domain
TOBE_3	PF12857.2	gi|557693899|ref|YP_008796953.1|	-	0.015	15.1	0.2	0.072	12.9	0.0	2.2	2	0	0	2	2	2	0	TOBE-like	domain
TOBE	PF03459.12	gi|557693899|ref|YP_008796953.1|	-	0.072	13.2	0.6	0.13	12.3	0.0	1.7	2	0	0	2	2	2	0	TOBE	domain
YPEB	PF14620.1	gi|557693899|ref|YP_008796953.1|	-	0.12	11.4	0.0	0.18	10.7	0.0	1.3	1	0	0	1	1	1	0	YpeB	sporulation
Ribosomal_L22	PF00237.14	gi|557693900|ref|YP_008796954.1|	-	1.8e-25	88.8	0.1	2.3e-25	88.5	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S3_C	PF00189.15	gi|557693901|ref|YP_008796955.1|	-	1.9e-13	50.4	0.1	3.8e-13	49.4	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|557693901|ref|YP_008796955.1|	-	5.3e-12	45.1	0.1	1.1e-11	44.1	0.1	1.5	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|557693901|ref|YP_008796955.1|	-	0.0026	17.3	0.1	0.017	14.8	0.0	2.4	2	0	0	2	2	2	1	KH	domain
KH_1	PF00013.24	gi|557693901|ref|YP_008796955.1|	-	0.0029	17.1	0.5	0.011	15.3	0.3	2.2	1	1	0	1	1	1	1	KH	domain
Tautomerase	PF01361.16	gi|557693901|ref|YP_008796955.1|	-	0.0095	15.5	0.2	0.021	14.3	0.1	1.5	1	0	0	1	1	1	1	Tautomerase	enzyme
Ribosomal_L29	PF00831.18	gi|557693902|ref|YP_008796956.1|	-	3.7e-15	55.3	4.0	4.3e-15	55.1	2.7	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
DUF1192	PF06698.6	gi|557693902|ref|YP_008796956.1|	-	0.00051	19.7	7.9	0.024	14.4	0.6	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1192)
DUF3810	PF12725.2	gi|557693902|ref|YP_008796956.1|	-	0.03	13.2	0.5	0.036	12.9	0.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3810)
Enkurin	PF13864.1	gi|557693902|ref|YP_008796956.1|	-	0.033	14.3	2.8	0.041	14.1	1.9	1.3	1	1	0	1	1	1	0	Calmodulin-binding
DUF4075	PF13294.1	gi|557693902|ref|YP_008796956.1|	-	0.036	14.0	1.3	0.045	13.7	0.9	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4075)
ING	PF12998.2	gi|557693902|ref|YP_008796956.1|	-	0.067	13.4	1.4	0.07	13.4	1.0	1.0	1	0	0	1	1	1	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
DUF972	PF06156.8	gi|557693902|ref|YP_008796956.1|	-	0.11	12.8	1.0	0.15	12.4	0.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
TrmB	PF01978.14	gi|557693902|ref|YP_008796956.1|	-	0.17	11.6	1.7	0.69	9.6	0.4	1.9	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
SpoOE-like	PF09388.5	gi|557693902|ref|YP_008796956.1|	-	0.18	11.3	2.0	0.19	11.2	0.3	1.9	2	0	0	2	2	2	0	Spo0E	like	sporulation	regulatory	protein
YtxH	PF12732.2	gi|557693902|ref|YP_008796956.1|	-	0.49	10.7	2.2	11	6.5	0.1	2.1	2	0	0	2	2	2	0	YtxH-like	protein
Mitofilin	PF09731.4	gi|557693902|ref|YP_008796956.1|	-	1.3	7.6	6.1	1.3	7.5	4.2	1.0	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
Vps51	PF08700.6	gi|557693902|ref|YP_008796956.1|	-	1.9	8.3	4.1	0.73	9.7	0.9	1.7	2	0	0	2	2	2	0	Vps51/Vps67
UPF0086	PF01868.11	gi|557693903|ref|YP_008796957.1|	-	2.6e-10	39.8	0.4	3.4e-10	39.4	0.3	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Colicin_D	PF11429.3	gi|557693903|ref|YP_008796957.1|	-	0.12	12.5	0.1	0.14	12.3	0.0	1.2	1	0	0	1	1	1	0	Colicin	D
Ribosomal_S17	PF00366.15	gi|557693904|ref|YP_008796958.1|	-	6e-26	90.2	2.8	7.4e-26	89.9	1.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
DNA_pol3_theta	PF06440.6	gi|557693904|ref|YP_008796958.1|	-	0.023	14.3	0.2	0.033	13.7	0.1	1.3	1	0	0	1	1	1	0	DNA	polymerase	III,	theta	subunit
NSs	PF11073.3	gi|557693904|ref|YP_008796958.1|	-	0.038	13.2	0.1	0.05	12.8	0.1	1.1	1	0	0	1	1	1	0	Rift	valley	fever	virus	non	structural	protein	(NSs)	like
zf-C3H1	PF10650.4	gi|557693904|ref|YP_008796958.1|	-	0.12	11.8	1.3	0.19	11.2	0.9	1.3	1	0	0	1	1	1	0	Putative	zinc-finger	domain
Ribosomal_L14	PF00238.14	gi|557693905|ref|YP_008796959.1|	-	1e-32	112.4	0.1	1.2e-32	112.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
KOW	PF00467.24	gi|557693906|ref|YP_008796960.1|	-	3.2e-06	26.6	3.1	5e-06	26.0	2.1	1.4	1	0	0	1	1	1	1	KOW	motif
RNA_pol_Rpb6	PF01192.17	gi|557693906|ref|YP_008796960.1|	-	0.038	13.7	0.1	0.38	10.5	0.0	2.5	3	0	0	3	3	3	0	RNA	polymerase	Rpb6
Ribosomal_S4e	PF00900.15	gi|557693907|ref|YP_008796961.1|	-	7e-22	76.8	0.0	1.4e-21	75.8	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	family	S4e
S4	PF01479.20	gi|557693907|ref|YP_008796961.1|	-	1.2e-09	37.3	0.0	2.5e-09	36.4	0.0	1.5	1	0	0	1	1	1	1	S4	domain
RS4NT	PF08071.7	gi|557693907|ref|YP_008796961.1|	-	4.6e-08	32.7	5.2	9.1e-08	31.8	3.6	1.5	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
HTH_17	PF12728.2	gi|557693907|ref|YP_008796961.1|	-	0.079	13.2	0.1	28	5.0	0.0	2.8	3	0	0	3	3	3	0	Helix-turn-helix	domain
Ribosomal_L5_C	PF00673.16	gi|557693908|ref|YP_008796962.1|	-	3.8e-21	74.6	0.1	3.6e-20	71.4	0.0	2.0	2	0	0	2	2	2	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|557693908|ref|YP_008796962.1|	-	1.9e-16	59.6	0.1	3.7e-16	58.6	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L5
Ribosomal_S14	PF00253.16	gi|557693909|ref|YP_008796963.1|	-	1.4e-15	56.3	2.4	1.5e-15	56.3	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
Zn_Tnp_IS1595	PF12760.2	gi|557693909|ref|YP_008796963.1|	-	0.0037	17.0	2.5	0.0045	16.7	1.7	1.1	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
DUF4182	PF13790.1	gi|557693909|ref|YP_008796963.1|	-	0.033	13.9	1.1	2.6	7.9	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4182)
DZR	PF12773.2	gi|557693909|ref|YP_008796963.1|	-	0.038	13.7	0.1	0.056	13.2	0.1	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
Ribosomal_L37ae	PF01780.14	gi|557693909|ref|YP_008796963.1|	-	0.058	13.2	0.7	0.068	13.0	0.5	1.1	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
zf-TFIIIC	PF12660.2	gi|557693909|ref|YP_008796963.1|	-	0.064	13.1	0.5	0.072	13.0	0.3	1.1	1	0	0	1	1	1	0	Putative	zinc-finger	of	transcription	factor	IIIC	complex
RRN7	PF11781.3	gi|557693909|ref|YP_008796963.1|	-	0.066	12.7	7.4	0.92	9.0	0.6	2.2	2	0	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
FYVE	PF01363.16	gi|557693909|ref|YP_008796963.1|	-	0.081	12.8	2.1	0.13	12.1	1.5	1.4	1	1	0	1	1	1	0	FYVE	zinc	finger
zf-C4_ClpX	PF06689.8	gi|557693909|ref|YP_008796963.1|	-	0.1	12.1	3.7	0.65	9.5	0.5	2.1	1	1	1	2	2	2	0	ClpX	C4-type	zinc	finger
zf-C4pol	PF14260.1	gi|557693909|ref|YP_008796963.1|	-	0.21	11.6	1.3	3.5	7.6	0.0	2.0	1	1	1	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
zf-AD	PF07776.10	gi|557693909|ref|YP_008796963.1|	-	0.23	11.4	1.8	3.2	7.8	0.1	2.0	1	1	1	2	2	2	0	Zinc-finger	associated	domain	(zf-AD)
Zn_ribbon_recom	PF13408.1	gi|557693909|ref|YP_008796963.1|	-	0.23	11.7	3.4	0.29	11.4	2.3	1.2	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|557693909|ref|YP_008796963.1|	-	0.29	10.6	1.3	0.52	9.8	0.9	1.4	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
NinF	PF05810.7	gi|557693909|ref|YP_008796963.1|	-	0.32	10.8	1.9	7.3	6.4	1.1	2.0	1	1	1	2	2	2	0	NinF	protein
DUF3505	PF12013.3	gi|557693909|ref|YP_008796963.1|	-	0.37	11.0	3.4	6.1	7.1	0.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3505)
zf-FPG_IleRS	PF06827.9	gi|557693909|ref|YP_008796963.1|	-	0.38	10.4	6.8	2.1	8.0	4.7	2.0	1	1	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
DUF2757	PF10955.3	gi|557693909|ref|YP_008796963.1|	-	0.9	9.7	5.7	0.98	9.6	0.5	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2757)
Prim_Zn_Ribbon	PF08273.7	gi|557693909|ref|YP_008796963.1|	-	1.9	8.6	4.6	5.4	7.1	0.5	2.1	1	1	1	2	2	2	0	Zinc-binding	domain	of	primase-helicase
DUF1660	PF07874.6	gi|557693909|ref|YP_008796963.1|	-	3.7	7.8	6.0	13	6.1	0.3	2.0	1	1	1	2	2	2	0	Prophage	protein	(DUF1660)
Ribosomal_L40e	PF01020.12	gi|557693909|ref|YP_008796963.1|	-	4.4	6.9	5.8	14	5.3	0.3	2.2	1	1	1	2	2	2	0	Ribosomal	L40e	family
Ribosomal_S8	PF00410.14	gi|557693910|ref|YP_008796964.1|	-	5.7e-23	81.1	0.0	7.8e-23	80.7	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_L6	PF00347.18	gi|557693911|ref|YP_008796965.1|	-	6.7e-19	68.1	9.1	1.9e-09	37.8	1.6	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
FecR	PF04773.8	gi|557693911|ref|YP_008796965.1|	-	0.0021	18.2	1.1	0.0026	17.9	0.2	1.5	2	0	0	2	2	2	1	FecR	protein
YbbR	PF07949.7	gi|557693911|ref|YP_008796965.1|	-	0.077	13.1	7.7	0.31	11.2	1.6	3.3	2	2	1	3	3	3	0	YbbR-like	protein
Lipocalin_7	PF14651.1	gi|557693911|ref|YP_008796965.1|	-	0.1	12.2	2.4	7	6.3	0.0	2.2	1	1	1	2	2	2	0	Lipocalin	/	cytosolic	fatty-acid	binding	protein	family
DNA_pol3_beta	PF00712.14	gi|557693911|ref|YP_008796965.1|	-	0.13	12.1	0.0	1.9	8.4	0.0	2.2	2	0	0	2	2	2	0	DNA	polymerase	III	beta	subunit,	N-terminal	domain
BON	PF04972.12	gi|557693911|ref|YP_008796965.1|	-	1	9.1	7.1	3.6	7.4	0.3	3.1	4	1	0	4	4	4	0	BON	domain
Ribosomal_L32e	PF01655.13	gi|557693912|ref|YP_008796966.1|	-	2.2e-35	121.0	0.0	2.6e-35	120.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L19e	PF01280.15	gi|557693913|ref|YP_008796967.1|	-	1.2e-45	154.8	4.0	1.6e-45	154.4	2.8	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L19e
Ribosomal_L18p	PF00861.17	gi|557693914|ref|YP_008796968.1|	-	3.7e-27	94.9	1.5	4.6e-27	94.5	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	L18p/L5e	family
Ribosomal_S5	PF00333.15	gi|557693915|ref|YP_008796969.1|	-	1.7e-25	88.5	2.1	3.4e-25	87.5	1.5	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_S5_C	PF03719.10	gi|557693915|ref|YP_008796969.1|	-	5.2e-22	76.8	0.1	1.5e-21	75.4	0.0	1.7	2	0	0	2	2	2	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_L30	PF00327.15	gi|557693916|ref|YP_008796970.1|	-	5.9e-12	44.9	0.1	9.7e-12	44.2	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
PCRF	PF03462.13	gi|557693916|ref|YP_008796970.1|	-	0.12	12.0	0.1	0.18	11.5	0.1	1.3	1	0	0	1	1	1	0	PCRF	domain
Ribosomal_L18e	PF00828.14	gi|557693917|ref|YP_008796971.1|	-	3.6e-23	82.3	2.3	5.3e-23	81.8	1.6	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
SecY	PF00344.15	gi|557693918|ref|YP_008796972.1|	-	1.1e-83	281.1	26.9	1.3e-83	280.8	18.6	1.1	1	0	0	1	1	1	1	SecY	translocase
DUF106	PF01956.11	gi|557693919|ref|YP_008796973.1|	-	3.7e-10	39.5	4.5	8.7e-10	38.3	3.1	1.6	1	1	0	1	1	1	1	Integral	membrane	protein	DUF106
60KD_IMP	PF02096.15	gi|557693919|ref|YP_008796973.1|	-	0.0006	19.5	0.1	0.00066	19.3	0.0	1.3	1	0	0	1	1	1	1	60Kd	inner	membrane	protein
DUF2207	PF09972.4	gi|557693919|ref|YP_008796973.1|	-	0.0041	15.7	0.3	0.0045	15.6	0.2	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
DUF2208	PF09973.4	gi|557693919|ref|YP_008796973.1|	-	0.0091	15.2	0.1	0.01	15.0	0.1	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2208)
Trep_Strep	PF09605.5	gi|557693919|ref|YP_008796973.1|	-	0.031	13.9	0.6	0.14	11.7	0.0	2.0	2	0	0	2	2	2	0	Hypothetical	bacterial	integral	membrane	protein	(Trep_Strep)
DUF267	PF03268.9	gi|557693919|ref|YP_008796973.1|	-	0.033	13.0	0.2	0.04	12.7	0.2	1.1	1	0	0	1	1	1	0	Caenorhabditis	protein	of	unknown	function,	DUF267
7tm_6	PF02949.15	gi|557693919|ref|YP_008796973.1|	-	0.1	11.4	0.0	0.12	11.2	0.0	1.2	1	0	0	1	1	1	0	7tm	Odorant	receptor
Vma12	PF11712.3	gi|557693919|ref|YP_008796973.1|	-	0.17	11.5	4.8	1	9.0	3.3	2.0	1	1	0	1	1	1	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
Cytidylate_kin2	PF13189.1	gi|557693920|ref|YP_008796974.1|	-	2.3e-17	63.4	0.1	5.3e-17	62.2	0.1	1.6	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|557693920|ref|YP_008796974.1|	-	6.6e-14	52.3	0.0	1e-13	51.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|557693920|ref|YP_008796974.1|	-	2.4e-09	38.0	0.1	4.7e-09	37.1	0.1	1.4	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|557693920|ref|YP_008796974.1|	-	8.3e-08	32.2	0.2	0.0016	18.3	0.1	2.2	2	0	0	2	2	2	2	Shikimate	kinase
AAA_33	PF13671.1	gi|557693920|ref|YP_008796974.1|	-	0.0062	16.4	1.2	0.12	12.2	0.8	2.5	1	1	1	2	2	2	1	AAA	domain
AAA_30	PF13604.1	gi|557693920|ref|YP_008796974.1|	-	0.011	15.3	0.2	1.6	8.2	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
Cytidylate_kin	PF02224.13	gi|557693920|ref|YP_008796974.1|	-	0.015	14.7	0.5	0.031	13.7	0.3	1.5	1	1	0	1	1	1	0	Cytidylate	kinase
LacI	PF00356.16	gi|557693920|ref|YP_008796974.1|	-	0.072	12.7	0.4	12	5.5	0.0	2.8	2	1	0	2	2	2	0	Bacterial	regulatory	proteins,	lacI	family
KOW	PF00467.24	gi|557693921|ref|YP_008796975.1|	-	0.00075	19.1	6.6	0.0012	18.5	4.6	1.3	1	0	0	1	1	1	1	KOW	motif
Ribosomal_L14e	PF01929.12	gi|557693921|ref|YP_008796975.1|	-	0.0067	16.7	0.1	0.0083	16.4	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L14
PUA	PF01472.15	gi|557693922|ref|YP_008796976.1|	-	3.3e-17	61.9	2.0	5.5e-17	61.2	1.4	1.4	1	0	0	1	1	1	1	PUA	domain
TruB_N	PF01509.13	gi|557693922|ref|YP_008796976.1|	-	1.6e-05	25.0	0.0	0.0014	18.7	0.0	2.5	1	1	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
RNase_PH_C	PF03725.10	gi|557693922|ref|YP_008796976.1|	-	0.034	14.0	1.4	0.43	10.5	0.0	2.7	3	0	0	3	3	3	0	3'	exoribonuclease	family,	domain	2
VirD1	PF07328.6	gi|557693922|ref|YP_008796976.1|	-	0.12	12.1	0.3	0.22	11.3	0.1	1.5	1	1	0	1	1	1	0	T-DNA	border	endonuclease	VirD1
CBS	PF00571.23	gi|557693923|ref|YP_008796977.1|	-	1.1e-32	111.5	4.5	6.9e-18	64.1	0.3	2.0	2	0	0	2	2	2	2	CBS	domain
IF3_N	PF05198.11	gi|557693923|ref|YP_008796977.1|	-	0.0015	18.4	0.2	0.32	10.9	0.0	2.4	2	0	0	2	2	2	2	Translation	initiation	factor	IF-3,	N-terminal	domain
Ribosomal_L9_C	PF03948.9	gi|557693923|ref|YP_008796977.1|	-	0.0053	16.8	0.1	0.34	11.0	0.0	2.2	2	0	0	2	2	2	1	Ribosomal	protein	L9,	C-terminal	domain
PRC	PF05239.11	gi|557693923|ref|YP_008796977.1|	-	0.5	10.2	2.6	5.3	6.9	0.0	2.3	2	1	0	2	2	2	0	PRC-barrel	domain
ABC_tran	PF00005.22	gi|557693924|ref|YP_008796978.1|	-	1e-29	103.6	0.0	1.4e-29	103.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|557693924|ref|YP_008796978.1|	-	1.7e-22	79.5	0.7	2.9e-22	78.7	0.5	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_29	PF13555.1	gi|557693924|ref|YP_008796978.1|	-	0.0043	16.5	0.0	0.0072	15.8	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|557693924|ref|YP_008796978.1|	-	0.011	15.1	0.4	0.26	10.6	0.3	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|557693924|ref|YP_008796978.1|	-	0.013	15.6	0.7	0.1	12.7	0.5	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|557693924|ref|YP_008796978.1|	-	0.017	15.0	0.1	0.022	14.7	0.1	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_21	PF13304.1	gi|557693924|ref|YP_008796978.1|	-	0.044	13.7	0.1	8.6	6.2	0.1	2.1	1	1	1	2	2	2	0	AAA	domain
SMC_N	PF02463.14	gi|557693924|ref|YP_008796978.1|	-	0.065	12.4	0.1	3.6	6.7	0.0	2.1	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_18	PF13238.1	gi|557693924|ref|YP_008796978.1|	-	0.086	13.1	0.0	0.14	12.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|557693924|ref|YP_008796978.1|	-	0.12	12.0	0.1	0.21	11.2	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KaiC	PF06745.8	gi|557693924|ref|YP_008796978.1|	-	0.13	11.3	0.2	0.24	10.4	0.0	1.5	2	0	0	2	2	2	0	KaiC
ATP-synt_C	PF00137.16	gi|557693925|ref|YP_008796979.1|	-	0.064	13.1	1.3	21	5.1	0.0	3.1	3	0	0	3	3	3	0	ATP	synthase	subunit	C
PPC	PF04151.10	gi|557693925|ref|YP_008796979.1|	-	0.079	13.9	0.0	0.26	12.2	0.0	1.9	2	0	0	2	2	2	0	Bacterial	pre-peptidase	C-terminal	domain
DUF1498	PF07385.7	gi|557693925|ref|YP_008796979.1|	-	0.088	11.9	0.0	0.14	11.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1498)
BNR_2	PF13088.1	gi|557693927|ref|YP_008796981.1|	-	5.5e-23	81.6	2.5	5e-13	48.9	0.1	3.0	1	1	1	2	2	2	2	BNR	repeat-like	domain
BNR	PF02012.15	gi|557693927|ref|YP_008796981.1|	-	7.7e-08	31.0	26.4	0.22	11.4	0.3	6.4	6	0	0	6	6	6	5	BNR/Asp-box	repeat
TIG	PF01833.19	gi|557693927|ref|YP_008796981.1|	-	0.003	17.5	0.6	0.011	15.7	0.1	2.2	2	0	0	2	2	2	1	IPT/TIG	domain
SBP_bac_5	PF00496.17	gi|557693928|ref|YP_008796982.1|	-	8.5e-27	93.9	3.7	6.2e-23	81.2	0.1	3.1	3	0	0	3	3	3	3	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
ATG16	PF08614.6	gi|557693929|ref|YP_008796983.1|	-	6.4e-06	26.1	9.4	1e-05	25.4	6.5	1.3	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
TPR_MLP1_2	PF07926.7	gi|557693929|ref|YP_008796983.1|	-	1.3e-05	24.9	5.1	2e-05	24.3	3.5	1.3	1	0	0	1	1	1	1	TPR/MLP1/MLP2-like	protein
DUF869	PF05911.6	gi|557693929|ref|YP_008796983.1|	-	2.9e-05	22.5	8.6	3.9e-05	22.1	5.9	1.1	1	0	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
WEMBL	PF05701.6	gi|557693929|ref|YP_008796983.1|	-	4.1e-05	22.2	7.0	5.6e-05	21.7	4.9	1.1	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
Mnd1	PF03962.10	gi|557693929|ref|YP_008796983.1|	-	4.7e-05	23.1	0.1	8.4e-05	22.3	0.1	1.4	1	0	0	1	1	1	1	Mnd1	family
Tropomyosin	PF00261.15	gi|557693929|ref|YP_008796983.1|	-	9.4e-05	21.6	17.2	0.00096	18.3	5.2	1.9	1	1	1	2	2	2	2	Tropomyosin
DUF677	PF05055.7	gi|557693929|ref|YP_008796983.1|	-	0.00014	20.6	0.3	0.00022	20.0	0.2	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF677)
Filament	PF00038.16	gi|557693929|ref|YP_008796983.1|	-	0.00017	21.2	6.7	0.00029	20.4	4.6	1.3	1	0	0	1	1	1	1	Intermediate	filament	protein
GAS	PF13851.1	gi|557693929|ref|YP_008796983.1|	-	0.00019	20.6	9.7	0.00029	20.0	6.7	1.2	1	0	0	1	1	1	1	Growth-arrest	specific	micro-tubule	binding
Nup54	PF13874.1	gi|557693929|ref|YP_008796983.1|	-	0.00028	20.5	8.0	0.00065	19.3	5.4	1.7	1	1	1	2	2	2	1	Nucleoporin	complex	subunit	54
FlaC_arch	PF05377.6	gi|557693929|ref|YP_008796983.1|	-	0.00048	19.9	13.6	0.0044	16.8	1.9	3.3	2	1	2	4	4	3	2	Flagella	accessory	protein	C	(FlaC)
Reo_sigmaC	PF04582.7	gi|557693929|ref|YP_008796983.1|	-	0.00051	19.3	5.2	0.00071	18.8	3.6	1.2	1	0	0	1	1	1	1	Reovirus	sigma	C	capsid	protein
DUF342	PF03961.8	gi|557693929|ref|YP_008796983.1|	-	0.00059	18.3	0.8	0.00075	18.0	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
APG6	PF04111.7	gi|557693929|ref|YP_008796983.1|	-	0.00063	18.8	8.0	0.00096	18.2	5.6	1.2	1	0	0	1	1	1	1	Autophagy	protein	Apg6
EzrA	PF06160.7	gi|557693929|ref|YP_008796983.1|	-	0.0007	17.9	3.9	0.001	17.3	2.7	1.1	1	0	0	1	1	1	1	Septation	ring	formation	regulator,	EzrA
Laminin_II	PF06009.7	gi|557693929|ref|YP_008796983.1|	-	0.00086	19.0	7.0	0.0017	18.1	4.9	1.5	1	0	0	1	1	1	1	Laminin	Domain	II
HemX	PF04375.9	gi|557693929|ref|YP_008796983.1|	-	0.00091	17.9	1.4	0.0014	17.3	1.0	1.2	1	0	0	1	1	1	1	HemX
MscS_porin	PF12795.2	gi|557693929|ref|YP_008796983.1|	-	0.00094	18.5	16.0	0.01	15.1	12.0	1.8	2	0	0	2	2	2	1	Mechanosensitive	ion	channel	porin	domain
LXG	PF04740.7	gi|557693929|ref|YP_008796983.1|	-	0.00096	19.0	3.2	0.0017	18.1	2.2	1.3	1	0	0	1	1	1	1	LXG	domain	of	WXG	superfamily
Baculo_PEP_C	PF04513.7	gi|557693929|ref|YP_008796983.1|	-	0.00097	18.9	10.6	0.00097	18.9	7.4	1.9	2	0	0	2	2	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
ALIX_LYPXL_bnd	PF13949.1	gi|557693929|ref|YP_008796983.1|	-	0.0012	17.8	6.1	0.0018	17.3	4.3	1.3	1	0	0	1	1	1	1	ALIX	V-shaped	domain	binding	to	HIV
V_ATPase_I	PF01496.14	gi|557693929|ref|YP_008796983.1|	-	0.0012	16.7	2.2	0.0019	16.1	1.5	1.3	1	0	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
Phlebovirus_NSM	PF07246.6	gi|557693929|ref|YP_008796983.1|	-	0.0013	17.9	3.0	0.002	17.3	2.1	1.2	1	0	0	1	1	1	1	Phlebovirus	nonstructural	protein	NS-M
FliJ	PF02050.11	gi|557693929|ref|YP_008796983.1|	-	0.0014	18.6	5.7	0.0014	18.6	3.9	1.5	2	0	0	2	2	1	1	Flagellar	FliJ	protein
CALCOCO1	PF07888.6	gi|557693929|ref|YP_008796983.1|	-	0.0017	16.7	5.1	0.0023	16.3	3.5	1.1	1	0	0	1	1	1	1	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
Atg14	PF10186.4	gi|557693929|ref|YP_008796983.1|	-	0.0021	17.0	5.9	0.0032	16.4	4.1	1.2	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF3584	PF12128.3	gi|557693929|ref|YP_008796983.1|	-	0.0026	15.1	5.8	0.0034	14.8	4.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
DUF812	PF05667.6	gi|557693929|ref|YP_008796983.1|	-	0.0033	15.9	1.7	0.0044	15.5	1.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF812)
DUF745	PF05335.8	gi|557693929|ref|YP_008796983.1|	-	0.0041	16.6	3.5	0.0059	16.1	2.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF745)
Vps51	PF08700.6	gi|557693929|ref|YP_008796983.1|	-	0.0042	16.9	4.3	0.3	10.9	0.5	2.6	2	0	0	2	2	2	1	Vps51/Vps67
IFT57	PF10498.4	gi|557693929|ref|YP_008796983.1|	-	0.0044	15.8	6.1	0.0066	15.2	4.2	1.2	1	0	0	1	1	1	1	Intra-flagellar	transport	protein	57
DUF2353	PF09789.4	gi|557693929|ref|YP_008796983.1|	-	0.0045	16.2	5.1	0.0071	15.6	3.6	1.2	1	0	0	1	1	1	1	Uncharacterized	coiled-coil	protein	(DUF2353)
Myosin_tail_1	PF01576.14	gi|557693929|ref|YP_008796983.1|	-	0.0045	14.7	7.3	0.0059	14.4	5.1	1.1	1	0	0	1	1	1	1	Myosin	tail
LPP	PF04728.8	gi|557693929|ref|YP_008796983.1|	-	0.0047	16.6	6.5	0.17	11.7	0.1	3.3	2	1	1	3	3	3	1	Lipoprotein	leucine-zipper
AAA_13	PF13166.1	gi|557693929|ref|YP_008796983.1|	-	0.0079	14.7	3.5	0.013	14.0	2.4	1.3	1	0	0	1	1	1	1	AAA	domain
PTRF_SDPR	PF15237.1	gi|557693929|ref|YP_008796983.1|	-	0.0083	15.5	6.1	0.012	15.0	4.2	1.2	1	0	0	1	1	1	1	PTRF/SDPR	family
DUF4446	PF14584.1	gi|557693929|ref|YP_008796983.1|	-	0.0084	15.9	3.9	0.018	14.8	0.4	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4446)
DUF2968	PF11180.3	gi|557693929|ref|YP_008796983.1|	-	0.0099	15.2	6.2	0.014	14.7	4.3	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2968)
Macoilin	PF09726.4	gi|557693929|ref|YP_008796983.1|	-	0.01	14.1	7.3	0.013	13.8	5.0	1.1	1	0	0	1	1	1	0	Transmembrane	protein
GP41	PF00517.12	gi|557693929|ref|YP_008796983.1|	-	0.011	15.3	4.8	0.017	14.6	0.5	2.4	1	1	1	2	2	2	0	Retroviral	envelope	protein
Tropomyosin_1	PF12718.2	gi|557693929|ref|YP_008796983.1|	-	0.012	15.4	13.1	0.02	14.7	9.1	1.3	1	0	0	1	1	1	0	Tropomyosin	like
DUF1664	PF07889.7	gi|557693929|ref|YP_008796983.1|	-	0.015	15.0	5.2	0.061	13.1	3.1	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
TMF_DNA_bd	PF12329.3	gi|557693929|ref|YP_008796983.1|	-	0.017	14.9	8.4	0.017	14.9	5.8	2.8	2	1	1	3	3	2	0	TATA	element	modulatory	factor	1	DNA	binding
DUF4140	PF13600.1	gi|557693929|ref|YP_008796983.1|	-	0.02	15.3	7.0	0.05	14.0	4.8	1.8	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
TBPIP	PF07106.8	gi|557693929|ref|YP_008796983.1|	-	0.021	14.3	9.5	0.063	12.8	6.6	1.8	1	1	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Baculo_p24	PF05073.7	gi|557693929|ref|YP_008796983.1|	-	0.022	14.3	1.1	0.033	13.7	0.8	1.2	1	0	0	1	1	1	0	Baculovirus	P24	capsid	protein
bZIP_1	PF00170.16	gi|557693929|ref|YP_008796983.1|	-	0.023	14.6	12.3	0.43	10.5	2.8	2.5	2	0	0	2	2	2	0	bZIP	transcription	factor
CENP-F_leu_zip	PF10473.4	gi|557693929|ref|YP_008796983.1|	-	0.023	14.5	13.5	0.17	11.7	9.4	1.9	1	1	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF3450	PF11932.3	gi|557693929|ref|YP_008796983.1|	-	0.026	13.8	8.5	0.06	12.5	5.9	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
OmpH	PF03938.9	gi|557693929|ref|YP_008796983.1|	-	0.029	14.2	2.4	0.064	13.1	1.7	1.6	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DivIVA	PF05103.8	gi|557693929|ref|YP_008796983.1|	-	0.029	14.4	7.9	0.055	13.5	5.4	1.4	1	0	0	1	1	1	0	DivIVA	protein
Erp_C	PF06780.6	gi|557693929|ref|YP_008796983.1|	-	0.03	14.1	2.6	0.063	13.1	1.8	1.5	1	0	0	1	1	1	0	Erp	protein	C-terminus
ADIP	PF11559.3	gi|557693929|ref|YP_008796983.1|	-	0.033	14.1	13.3	0.07	13.0	8.8	1.7	1	1	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
CCDC144C	PF14915.1	gi|557693929|ref|YP_008796983.1|	-	0.035	13.0	13.8	0.21	10.4	9.6	1.9	1	1	0	1	1	1	0	CCDC144C	protein	coiled-coil	region
Fmp27_WPPW	PF10359.4	gi|557693929|ref|YP_008796983.1|	-	0.038	12.4	2.6	0.049	12.0	1.8	1.1	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
DUF4200	PF13863.1	gi|557693929|ref|YP_008796983.1|	-	0.042	13.8	6.3	0.077	12.9	4.4	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
DUF2203	PF09969.4	gi|557693929|ref|YP_008796983.1|	-	0.044	13.9	0.1	0.082	13.1	0.1	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
MIF4G_like_2	PF09090.6	gi|557693929|ref|YP_008796983.1|	-	0.044	12.9	2.5	0.077	12.2	1.7	1.4	1	0	0	1	1	1	0	MIF4G	like
DUF948	PF06103.6	gi|557693929|ref|YP_008796983.1|	-	0.046	13.5	6.8	0.11	12.3	1.8	2.8	2	1	1	3	3	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Spc7	PF08317.6	gi|557693929|ref|YP_008796983.1|	-	0.058	12.0	8.8	0.089	11.4	6.1	1.2	1	0	0	1	1	1	0	Spc7	kinetochore	protein
Fez1	PF06818.10	gi|557693929|ref|YP_008796983.1|	-	0.06	13.3	5.9	0.089	12.7	4.1	1.3	1	0	0	1	1	1	0	Fez1
DUF4164	PF13747.1	gi|557693929|ref|YP_008796983.1|	-	0.062	13.4	11.7	2.9	8.0	4.8	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4164)
MAD	PF05557.8	gi|557693929|ref|YP_008796983.1|	-	0.069	11.2	10.7	0.093	10.8	7.4	1.1	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
DUF2730	PF10805.3	gi|557693929|ref|YP_008796983.1|	-	0.076	12.7	7.8	0.3	10.8	1.6	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2730)
Fib_alpha	PF08702.5	gi|557693929|ref|YP_008796983.1|	-	0.084	13.0	7.9	0.17	12.0	5.5	1.4	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DUF4472	PF14739.1	gi|557693929|ref|YP_008796983.1|	-	0.084	13.3	7.1	0.15	12.5	4.9	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4472)
HOOK	PF05622.7	gi|557693929|ref|YP_008796983.1|	-	0.086	10.6	10.2	0.13	10.1	7.0	1.1	1	0	0	1	1	1	0	HOOK	protein
IncA	PF04156.9	gi|557693929|ref|YP_008796983.1|	-	0.087	12.4	28.1	1.2	8.6	19.5	2.1	1	1	0	1	1	1	0	IncA	protein
DUF16	PF01519.11	gi|557693929|ref|YP_008796983.1|	-	0.087	13.0	4.1	0.17	12.1	2.9	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF16
Baculo_helicase	PF04735.7	gi|557693929|ref|YP_008796983.1|	-	0.1	9.9	0.1	0.1	9.9	0.1	1.0	1	0	0	1	1	1	0	Baculovirus	DNA	helicase
Kinetocho_Slk19	PF12709.2	gi|557693929|ref|YP_008796983.1|	-	0.11	12.6	11.1	3.4	7.8	0.4	3.4	2	1	2	4	4	3	0	Central	kinetochore-associated
Prefoldin_2	PF01920.15	gi|557693929|ref|YP_008796983.1|	-	0.11	12.2	10.4	1.1	9.0	2.7	2.6	1	1	1	2	2	2	0	Prefoldin	subunit
Cluap1	PF10234.4	gi|557693929|ref|YP_008796983.1|	-	0.12	11.5	5.3	0.18	11.0	3.7	1.2	1	0	0	1	1	1	0	Clusterin-associated	protein-1
HAUS-augmin3	PF14932.1	gi|557693929|ref|YP_008796983.1|	-	0.12	11.5	7.1	0.19	10.8	4.9	1.2	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
CENP-Q	PF13094.1	gi|557693929|ref|YP_008796983.1|	-	0.13	12.2	13.2	0.43	10.5	9.2	1.7	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
CASP_C	PF08172.7	gi|557693929|ref|YP_008796983.1|	-	0.16	10.9	9.1	1	8.3	2.7	2.0	1	1	1	2	2	2	0	CASP	C	terminal
Gp58	PF07902.6	gi|557693929|ref|YP_008796983.1|	-	0.17	10.0	4.2	0.23	9.6	2.9	1.1	1	0	0	1	1	1	0	gp58-like	protein
COG2	PF06148.6	gi|557693929|ref|YP_008796983.1|	-	0.18	11.6	6.5	1.8	8.4	4.5	2.0	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
NPV_P10	PF05531.7	gi|557693929|ref|YP_008796983.1|	-	0.18	12.0	10.8	0.24	11.6	4.6	2.9	2	1	1	3	3	2	0	Nucleopolyhedrovirus	P10	protein
TMPIT	PF07851.8	gi|557693929|ref|YP_008796983.1|	-	0.22	10.5	1.8	0.37	9.8	1.3	1.3	1	0	0	1	1	1	0	TMPIT-like	protein
Bacillus_HBL	PF05791.6	gi|557693929|ref|YP_008796983.1|	-	0.24	10.7	5.7	0.48	9.7	4.0	1.5	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
Prefoldin	PF02996.12	gi|557693929|ref|YP_008796983.1|	-	0.25	11.0	8.4	3.4	7.3	0.4	2.5	1	1	1	2	2	2	0	Prefoldin	subunit
DUF641	PF04859.7	gi|557693929|ref|YP_008796983.1|	-	0.29	10.9	7.5	0.21	11.3	2.2	2.3	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
DivIC	PF04977.10	gi|557693929|ref|YP_008796983.1|	-	0.29	10.6	12.8	0.31	10.5	1.9	3.1	1	1	2	3	3	3	0	Septum	formation	initiator
Spc24	PF08286.6	gi|557693929|ref|YP_008796983.1|	-	0.29	10.8	12.2	1.6	8.4	2.5	2.3	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
DASH_Dad2	PF08654.5	gi|557693929|ref|YP_008796983.1|	-	0.34	10.9	5.0	0.2	11.6	0.5	2.2	1	1	1	2	2	2	0	DASH	complex	subunit	Dad2
SlyX	PF04102.7	gi|557693929|ref|YP_008796983.1|	-	0.38	11.1	10.6	1.5	9.2	4.0	2.5	1	1	1	2	2	2	0	SlyX
DUF724	PF05266.9	gi|557693929|ref|YP_008796983.1|	-	0.39	10.3	5.3	0.59	9.7	3.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
AATF-Che1	PF13339.1	gi|557693929|ref|YP_008796983.1|	-	0.41	10.8	8.3	0.97	9.5	5.6	1.7	1	1	1	2	2	2	0	Apoptosis	antagonizing	transcription	factor
DUF972	PF06156.8	gi|557693929|ref|YP_008796983.1|	-	0.41	10.9	7.5	0.98	9.7	5.2	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
PspA_IM30	PF04012.7	gi|557693929|ref|YP_008796983.1|	-	0.42	9.9	9.5	1.9	7.7	2.6	2.1	1	1	1	2	2	2	0	PspA/IM30	family
DMPK_coil	PF08826.5	gi|557693929|ref|YP_008796983.1|	-	0.5	10.2	11.5	1.2	9.1	1.4	3.7	1	1	3	4	4	4	0	DMPK	coiled	coil	domain	like
Prominin	PF05478.6	gi|557693929|ref|YP_008796983.1|	-	0.53	7.7	5.0	0.79	7.1	3.5	1.2	1	0	0	1	1	1	0	Prominin
SNARE	PF05739.14	gi|557693929|ref|YP_008796983.1|	-	0.55	9.9	7.0	1.9	8.2	1.5	2.4	1	1	1	2	2	2	0	SNARE	domain
DUF2681	PF10883.3	gi|557693929|ref|YP_008796983.1|	-	0.57	10.4	4.3	0.76	10.0	0.9	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2681)
FemAB	PF02388.11	gi|557693929|ref|YP_008796983.1|	-	0.63	8.6	4.3	1.3	7.6	2.5	1.7	2	0	0	2	2	2	0	FemAB	family
WXG100	PF06013.7	gi|557693929|ref|YP_008796983.1|	-	0.67	9.9	4.1	2.7	8.0	2.0	2.5	2	1	1	3	3	2	0	Proteins	of	100	residues	with	WXG
FadA	PF09403.5	gi|557693929|ref|YP_008796983.1|	-	0.7	9.9	5.0	1.8	8.6	3.5	1.7	1	1	0	1	1	1	0	Adhesion	protein	FadA
Sec2p	PF06428.6	gi|557693929|ref|YP_008796983.1|	-	0.72	9.7	10.7	3.3	7.5	5.9	2.2	1	1	1	2	2	2	0	GDP/GTP	exchange	factor	Sec2p
Seryl_tRNA_N	PF02403.17	gi|557693929|ref|YP_008796983.1|	-	0.75	9.8	7.3	4.2	7.4	4.7	2.1	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
EMP24_GP25L	PF01105.19	gi|557693929|ref|YP_008796983.1|	-	0.93	9.1	6.5	8.9	5.9	4.5	2.1	1	1	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
Phage_lysis	PF03245.8	gi|557693929|ref|YP_008796983.1|	-	1.5	8.8	11.1	7.9	6.4	0.3	2.2	1	1	1	2	2	2	0	Bacteriophage	Rz	lysis	protein
Cep57_CLD_2	PF14197.1	gi|557693929|ref|YP_008796983.1|	-	1.9	8.4	18.9	0.27	11.2	3.3	3.6	2	1	2	4	4	3	0	Centrosome	localisation	domain	of	PPC89
DUF3552	PF12072.3	gi|557693929|ref|YP_008796983.1|	-	2	7.5	9.5	3.9	6.6	6.6	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
CorA	PF01544.13	gi|557693929|ref|YP_008796983.1|	-	2.2	7.2	11.0	2.4	7.1	6.7	1.6	1	1	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
DUF1515	PF07439.6	gi|557693929|ref|YP_008796983.1|	-	2.4	7.9	5.8	1.1	9.0	1.5	2.2	1	1	2	3	3	2	0	Protein	of	unknown	function	(DUF1515)
DUF4349	PF14257.1	gi|557693929|ref|YP_008796983.1|	-	3	7.0	12.4	0.74	8.9	2.5	2.5	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4349)
Syntaxin-6_N	PF09177.6	gi|557693929|ref|YP_008796983.1|	-	4	7.9	7.1	12	6.4	3.8	2.2	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
Shugoshin_N	PF07558.6	gi|557693929|ref|YP_008796983.1|	-	6.2	6.6	15.3	0.31	10.8	1.7	3.0	3	1	0	3	3	2	0	Shugoshin	N-terminal	coiled-coil	region
Med4	PF10018.4	gi|557693929|ref|YP_008796983.1|	-	7	5.9	10.2	19	4.5	7.1	1.7	1	1	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
BLOC1_2	PF10046.4	gi|557693929|ref|YP_008796983.1|	-	7.3	6.7	14.6	4.6	7.4	2.3	3.2	3	1	1	4	4	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF904	PF06005.7	gi|557693929|ref|YP_008796983.1|	-	7.4	6.9	14.0	18	5.7	1.1	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF904)
FliD_N	PF02465.13	gi|557693929|ref|YP_008796983.1|	-	7.7	6.9	9.4	9.7	6.6	0.9	2.3	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
FUSC	PF04632.7	gi|557693929|ref|YP_008796983.1|	-	7.7	4.8	8.3	13	4.1	5.8	1.4	1	1	0	1	1	1	0	Fusaric	acid	resistance	protein	family
BPD_transp_1	PF00528.17	gi|557693930|ref|YP_008796984.1|	-	7.8e-35	120.0	11.4	7.8e-35	120.0	7.9	2.2	2	1	1	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|557693931|ref|YP_008796985.1|	-	9.1e-22	77.8	0.0	1.2e-21	77.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|557693931|ref|YP_008796985.1|	-	2e-19	69.6	0.7	3.3e-19	69.0	0.5	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|557693931|ref|YP_008796985.1|	-	1.2e-12	48.4	0.1	1.7e-11	44.6	0.0	2.0	1	1	1	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|557693931|ref|YP_008796985.1|	-	5.2e-06	26.6	0.2	0.00018	21.6	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|557693931|ref|YP_008796985.1|	-	9.4e-06	25.0	0.2	4.2e-05	22.8	0.1	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|557693931|ref|YP_008796985.1|	-	0.0015	18.7	0.3	0.016	15.4	0.2	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_ATPase	PF09818.4	gi|557693931|ref|YP_008796985.1|	-	0.014	13.9	0.2	0.069	11.7	0.1	1.8	1	1	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
AAA_25	PF13481.1	gi|557693931|ref|YP_008796985.1|	-	0.02	14.2	0.2	0.8	9.0	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|557693931|ref|YP_008796985.1|	-	0.03	13.7	1.4	0.12	11.8	0.0	2.1	1	1	0	2	2	2	0	AAA-like	domain
DUF3265	PF11665.3	gi|557693931|ref|YP_008796985.1|	-	0.034	13.9	0.2	0.034	13.9	0.2	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3265)
AAA_15	PF13175.1	gi|557693931|ref|YP_008796985.1|	-	0.036	13.1	0.8	0.07	12.1	0.1	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|557693931|ref|YP_008796985.1|	-	0.037	13.9	0.0	0.11	12.4	0.0	1.8	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
PRK	PF00485.13	gi|557693931|ref|YP_008796985.1|	-	0.14	11.6	0.1	1.3	8.5	0.0	2.4	3	0	0	3	3	3	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_16	PF13191.1	gi|557693931|ref|YP_008796985.1|	-	0.23	11.4	0.5	0.41	10.6	0.3	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
BPD_transp_1	PF00528.17	gi|557693932|ref|YP_008796986.1|	-	3e-22	79.0	14.1	3e-22	79.0	9.8	1.8	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
z-alpha	PF02295.12	gi|557693933|ref|YP_008796987.1|	-	0.00017	21.3	0.1	0.00028	20.5	0.1	1.4	1	0	0	1	1	1	1	Adenosine	deaminase	z-alpha	domain
HTH_27	PF13463.1	gi|557693933|ref|YP_008796987.1|	-	0.00047	20.4	0.0	0.00086	19.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|557693933|ref|YP_008796987.1|	-	0.0043	16.7	0.0	0.006	16.2	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|557693933|ref|YP_008796987.1|	-	0.0082	15.7	0.0	0.012	15.2	0.0	1.2	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|557693933|ref|YP_008796987.1|	-	0.012	15.3	0.2	0.024	14.3	0.1	1.5	2	0	0	2	2	2	0	MarR	family
Rrf2	PF02082.15	gi|557693933|ref|YP_008796987.1|	-	0.03	14.4	0.0	0.059	13.5	0.0	1.5	1	1	1	2	2	2	0	Transcriptional	regulator
HTH_26	PF13443.1	gi|557693933|ref|YP_008796987.1|	-	0.073	13.2	0.0	0.12	12.6	0.0	1.3	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|557693933|ref|YP_008796987.1|	-	0.1	12.1	0.0	0.22	11.0	0.0	1.5	1	1	1	2	2	2	0	TFIIE	alpha	subunit
HTH_36	PF13730.1	gi|557693933|ref|YP_008796987.1|	-	0.12	12.4	0.1	0.33	11.0	0.1	1.7	1	1	1	2	2	2	0	Helix-turn-helix	domain
RcbX	PF02341.10	gi|557693933|ref|YP_008796987.1|	-	0.13	12.4	0.0	0.22	11.6	0.0	1.3	1	0	0	1	1	1	0	RbcX	protein
Arch_ATPase	PF01637.13	gi|557693934|ref|YP_008796988.1|	-	1.1e-08	35.1	0.0	2.1e-08	34.1	0.0	1.5	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_22	PF13401.1	gi|557693934|ref|YP_008796988.1|	-	5.2e-08	33.1	0.0	1.4e-07	31.6	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|557693934|ref|YP_008796988.1|	-	2e-05	24.6	0.2	0.00084	19.3	0.2	2.6	1	1	0	1	1	1	1	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|557693934|ref|YP_008796988.1|	-	0.0003	19.7	0.0	0.00059	18.7	0.0	1.4	1	0	0	1	1	1	1	NB-ARC	domain
Bac_DnaA	PF00308.13	gi|557693934|ref|YP_008796988.1|	-	0.00086	19.0	0.0	0.12	12.0	0.0	2.5	2	1	0	2	2	2	1	Bacterial	dnaA	protein
AAA	PF00004.24	gi|557693934|ref|YP_008796988.1|	-	0.0015	18.7	0.0	0.0031	17.6	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|557693934|ref|YP_008796988.1|	-	0.003	17.2	0.0	0.0055	16.3	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
MobB	PF03205.9	gi|557693934|ref|YP_008796988.1|	-	0.0058	16.3	0.0	0.026	14.2	0.0	2.1	3	0	0	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|557693934|ref|YP_008796988.1|	-	0.012	16.3	0.2	0.057	14.2	0.0	2.0	1	1	0	2	2	2	0	AAA	domain
AAA_31	PF13614.1	gi|557693934|ref|YP_008796988.1|	-	0.018	14.9	0.0	0.062	13.2	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.12	gi|557693934|ref|YP_008796988.1|	-	0.02	14.4	0.0	0.041	13.4	0.0	1.5	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
RuvB_N	PF05496.7	gi|557693934|ref|YP_008796988.1|	-	0.03	13.3	0.0	0.059	12.4	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
PduV-EutP	PF10662.4	gi|557693934|ref|YP_008796988.1|	-	0.064	12.7	0.1	0.21	11.0	0.0	1.8	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
ABC_tran	PF00005.22	gi|557693934|ref|YP_008796988.1|	-	0.085	13.1	0.0	0.17	12.1	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
TFIID_90kDa	PF04494.10	gi|557693934|ref|YP_008796988.1|	-	0.088	12.8	1.7	2.3	8.2	0.1	2.9	2	1	1	3	3	3	0	WD40	associated	region	in	TFIID	subunit
Zeta_toxin	PF06414.7	gi|557693934|ref|YP_008796988.1|	-	0.09	11.8	0.0	0.2	10.7	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
GYD	PF08734.6	gi|557693935|ref|YP_008796989.1|	-	5.1e-09	35.7	0.0	5.6e-09	35.5	0.0	1.2	1	0	0	1	1	1	1	GYD	domain
AsnC_trans_reg	PF01037.16	gi|557693935|ref|YP_008796989.1|	-	0.025	14.2	0.0	0.04	13.6	0.0	1.4	1	1	0	1	1	1	0	AsnC	family
FlaG	PF03646.10	gi|557693935|ref|YP_008796989.1|	-	0.086	12.9	0.0	0.62	10.2	0.0	1.9	2	0	0	2	2	2	0	FlaG	protein
DAO	PF01266.19	gi|557693937|ref|YP_008796991.1|	-	4.5e-78	262.6	0.2	5.1e-78	262.4	0.1	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|557693937|ref|YP_008796991.1|	-	1.5e-06	27.1	1.2	0.0011	17.6	0.6	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
Thi4	PF01946.12	gi|557693937|ref|YP_008796991.1|	-	1.2e-05	24.5	0.5	0.0001	21.4	0.2	2.1	2	0	0	2	2	2	1	Thi4	family
FAD_oxidored	PF12831.2	gi|557693937|ref|YP_008796991.1|	-	1.9e-05	23.9	3.9	0.0003	19.9	2.7	2.1	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|557693937|ref|YP_008796991.1|	-	8.9e-05	21.5	0.9	0.00014	20.8	0.3	1.5	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|557693937|ref|YP_008796991.1|	-	0.00013	21.9	0.1	0.0009	19.1	0.1	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|557693937|ref|YP_008796991.1|	-	0.00017	21.6	0.1	0.051	13.6	0.1	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
ThiF	PF00899.16	gi|557693937|ref|YP_008796991.1|	-	0.00046	20.0	0.3	0.001	18.9	0.2	1.5	1	0	0	1	1	1	1	ThiF	family
NAD_binding_8	PF13450.1	gi|557693937|ref|YP_008796991.1|	-	0.00063	19.7	1.0	0.0017	18.3	0.7	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|557693937|ref|YP_008796991.1|	-	0.0043	15.5	0.4	1.4	7.3	0.1	2.1	2	0	0	2	2	2	2	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|557693937|ref|YP_008796991.1|	-	0.0046	16.0	1.3	0.013	14.6	0.6	1.8	2	0	0	2	2	2	1	FAD	binding	domain
GMC_oxred_N	PF00732.14	gi|557693937|ref|YP_008796991.1|	-	0.0048	16.0	0.2	0.32	10.0	0.0	2.2	2	0	0	2	2	2	1	GMC	oxidoreductase
Lycopene_cycl	PF05834.7	gi|557693937|ref|YP_008796991.1|	-	0.01	14.8	0.2	0.033	13.0	0.0	1.8	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Shikimate_DH	PF01488.15	gi|557693937|ref|YP_008796991.1|	-	0.011	15.7	0.0	0.062	13.4	0.0	2.0	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
GIDA	PF01134.17	gi|557693937|ref|YP_008796991.1|	-	0.035	12.9	0.5	0.065	12.0	0.4	1.4	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|557693937|ref|YP_008796991.1|	-	0.036	14.4	0.8	0.12	12.7	0.4	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|557693937|ref|YP_008796991.1|	-	0.067	12.8	0.1	0.15	11.7	0.1	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.1	gi|557693937|ref|YP_008796991.1|	-	0.11	12.2	1.1	0.93	9.2	0.1	2.1	2	0	0	2	2	2	0	FAD-NAD(P)-binding
TrkA_N	PF02254.13	gi|557693937|ref|YP_008796991.1|	-	0.12	12.3	0.5	0.46	10.5	0.1	2.0	1	1	1	2	2	2	0	TrkA-N	domain
NAD_Gly3P_dh_N	PF01210.18	gi|557693937|ref|YP_008796991.1|	-	0.16	11.6	0.5	0.29	10.8	0.3	1.4	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NapD	PF03927.8	gi|557693937|ref|YP_008796991.1|	-	0.17	11.7	0.0	0.34	10.7	0.0	1.4	1	0	0	1	1	1	0	NapD	protein
HTH_23	PF13384.1	gi|557693938|ref|YP_008796992.1|	-	0.04	13.5	0.1	0.1	12.2	0.1	1.7	1	0	0	1	1	1	0	Homeodomain-like	domain
DUF46	PF01864.12	gi|557693939|ref|YP_008796993.1|	-	8.1e-40	136.5	5.7	2e-39	135.2	4.0	1.5	1	1	0	1	1	1	1	Putative	integral	membrane	protein	DUF46
CTP_transf_1	PF01148.15	gi|557693939|ref|YP_008796993.1|	-	4e-07	29.9	12.8	8.1e-07	28.9	4.8	2.3	1	1	1	2	2	2	2	Cytidylyltransferase	family
DUF204	PF02659.10	gi|557693939|ref|YP_008796993.1|	-	8.8	6.5	14.5	0.18	11.9	4.0	2.6	3	1	0	3	3	3	0	Domain	of	unknown	function	DUF
RNase_H_2	PF13482.1	gi|557693940|ref|YP_008796994.1|	-	0.0044	16.8	0.0	0.0054	16.5	0.0	1.1	1	0	0	1	1	1	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|557693940|ref|YP_008796994.1|	-	0.02	14.4	0.0	0.031	13.8	0.0	1.2	1	1	0	1	1	1	0	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DNA_pol_B_exo1	PF03104.14	gi|557693940|ref|YP_008796994.1|	-	0.041	12.7	0.0	0.043	12.6	0.0	1.1	1	0	0	1	1	1	0	DNA	polymerase	family	B,	exonuclease	domain
AdoHcyase	PF05221.12	gi|557693941|ref|YP_008796995.1|	-	1.1e-58	198.3	0.0	1.4e-58	198.0	0.0	1.1	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|557693941|ref|YP_008796995.1|	-	2.1e-54	183.7	2.0	3.8e-54	182.9	0.5	2.0	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|557693941|ref|YP_008796995.1|	-	1.9e-11	43.4	0.4	3.7e-11	42.5	0.3	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|557693941|ref|YP_008796995.1|	-	6.4e-05	22.9	0.1	0.00016	21.6	0.0	1.7	1	0	0	1	1	1	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|557693941|ref|YP_008796995.1|	-	0.0001	21.9	2.9	0.00036	20.1	1.4	1.9	1	1	1	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|557693941|ref|YP_008796995.1|	-	0.0001	22.4	0.2	0.00027	21.1	0.1	1.7	1	0	0	1	1	1	1	Putative	NAD(P)-binding
IlvN	PF07991.7	gi|557693941|ref|YP_008796995.1|	-	0.00032	20.1	0.4	0.00063	19.1	0.3	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
ELFV_dehydrog	PF00208.16	gi|557693941|ref|YP_008796995.1|	-	0.0058	16.2	0.2	0.0089	15.6	0.1	1.3	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ADH_zinc_N	PF00107.21	gi|557693941|ref|YP_008796995.1|	-	0.018	14.6	0.2	0.059	12.9	0.1	1.9	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
3HCDH_N	PF02737.13	gi|557693941|ref|YP_008796995.1|	-	0.033	13.8	1.7	0.073	12.7	1.2	1.7	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NifT	PF06988.6	gi|557693941|ref|YP_008796995.1|	-	0.077	12.4	0.0	0.17	11.3	0.0	1.5	1	0	0	1	1	1	0	NifT/FixU	protein
FdtA	PF05523.6	gi|557693941|ref|YP_008796995.1|	-	0.085	12.3	0.0	0.15	11.5	0.0	1.3	1	0	0	1	1	1	0	WxcM-like,	C-terminal
DUF3216	PF11505.3	gi|557693941|ref|YP_008796995.1|	-	0.11	12.2	0.1	0.33	10.7	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3216)
DFP	PF04127.10	gi|557693941|ref|YP_008796995.1|	-	0.15	11.6	0.5	0.6	9.7	0.1	2.0	2	0	0	2	2	2	0	DNA	/	pantothenate	metabolism	flavoprotein
YdfZ	PF14001.1	gi|557693941|ref|YP_008796995.1|	-	0.17	12.1	1.2	5.7	7.2	0.1	2.6	2	0	0	2	2	2	0	YdfZ	protein
eIF-5_eIF-2B	PF01873.12	gi|557693942|ref|YP_008796996.1|	-	1.7e-28	98.7	0.0	2.1e-28	98.5	0.0	1.1	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
TF_Zn_Ribbon	PF08271.7	gi|557693942|ref|YP_008796996.1|	-	0.014	14.6	1.1	0.034	13.4	0.3	1.9	2	0	0	2	2	2	0	TFIIB	zinc-binding
Cys_rich_KTR	PF14205.1	gi|557693942|ref|YP_008796996.1|	-	0.041	13.3	0.5	2	7.9	0.1	2.3	2	0	0	2	2	2	0	Cysteine-rich	KTR
FdhE	PF04216.7	gi|557693942|ref|YP_008796996.1|	-	0.13	11.9	0.3	0.12	12.0	0.2	1.4	1	1	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
Zn-ribbon_8	PF09723.5	gi|557693942|ref|YP_008796996.1|	-	0.27	11.1	2.0	2.1	8.3	1.4	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
DUF424	PF04242.8	gi|557693943|ref|YP_008796997.1|	-	9.1e-20	70.5	0.1	9.9e-20	70.4	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
PK_C	PF02887.11	gi|557693943|ref|YP_008796997.1|	-	0.0008	18.9	0.0	0.00099	18.6	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
MazG	PF03819.12	gi|557693944|ref|YP_008796998.1|	-	3.3e-05	23.7	0.1	4.5e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	MazG	nucleotide	pyrophosphohydrolase	domain
HMG-CoA_red	PF00368.13	gi|557693945|ref|YP_008796999.1|	-	4.3e-93	311.9	2.7	6.1e-93	311.4	1.9	1.2	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF4443	PF14544.1	gi|557693946|ref|YP_008797000.1|	-	5.3e-11	42.3	0.0	9.2e-11	41.5	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4443)
PaaX	PF07848.7	gi|557693946|ref|YP_008797000.1|	-	0.004	17.1	0.5	0.0093	15.9	0.3	1.6	1	0	0	1	1	1	1	PaaX-like	protein
HTH_45	PF14947.1	gi|557693946|ref|YP_008797000.1|	-	0.01	15.6	0.0	0.019	14.7	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|557693946|ref|YP_008797000.1|	-	0.029	14.3	0.0	0.086	12.7	0.0	1.8	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4093	PF13331.1	gi|557693946|ref|YP_008797000.1|	-	0.042	14.0	0.0	0.1	12.8	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4093)
SRP54	PF00448.17	gi|557693947|ref|YP_008797001.1|	-	8.9e-67	224.3	0.2	1.3e-66	223.8	0.1	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.14	gi|557693947|ref|YP_008797001.1|	-	1.3e-08	34.8	1.1	3.3e-08	33.5	0.3	2.1	2	0	0	2	2	1	1	SRP54-type	protein,	helical	bundle	domain
MobB	PF03205.9	gi|557693947|ref|YP_008797001.1|	-	1.4e-07	31.2	1.1	1.4e-06	28.0	0.0	2.5	3	0	0	3	3	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|557693947|ref|YP_008797001.1|	-	1.8e-07	31.3	0.0	3.3e-07	30.4	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
CbiA	PF01656.18	gi|557693947|ref|YP_008797001.1|	-	1.5e-06	27.7	3.3	9.9e-06	25.0	1.1	2.6	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Zeta_toxin	PF06414.7	gi|557693947|ref|YP_008797001.1|	-	3.7e-06	26.1	0.0	6.3e-06	25.4	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
AAA_22	PF13401.1	gi|557693947|ref|YP_008797001.1|	-	5.2e-05	23.3	0.0	0.00052	20.1	0.0	2.2	1	1	1	2	2	2	1	AAA	domain
cobW	PF02492.14	gi|557693947|ref|YP_008797001.1|	-	6e-05	22.5	3.1	0.00027	20.4	0.4	2.6	2	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
KTI12	PF08433.5	gi|557693947|ref|YP_008797001.1|	-	6.1e-05	22.3	0.0	0.00012	21.3	0.0	1.4	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
APS_kinase	PF01583.15	gi|557693947|ref|YP_008797001.1|	-	7.4e-05	22.4	0.0	0.00015	21.4	0.0	1.5	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_33	PF13671.1	gi|557693947|ref|YP_008797001.1|	-	0.0001	22.2	0.1	0.00021	21.2	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|557693947|ref|YP_008797001.1|	-	0.0001	21.9	0.3	0.00018	21.1	0.2	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|557693947|ref|YP_008797001.1|	-	0.00016	22.4	0.5	0.0006	20.6	0.1	2.3	2	1	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|557693947|ref|YP_008797001.1|	-	0.00018	21.6	0.1	0.0024	18.0	0.0	2.4	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|557693947|ref|YP_008797001.1|	-	0.00026	20.6	0.3	0.0006	19.5	0.2	1.7	1	1	0	1	1	1	1	Part	of	AAA	domain
UPF0079	PF02367.12	gi|557693947|ref|YP_008797001.1|	-	0.00043	19.8	0.0	0.88	9.2	0.0	2.6	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
NTPase_1	PF03266.10	gi|557693947|ref|YP_008797001.1|	-	0.00048	19.8	0.2	0.0055	16.4	0.2	2.4	1	1	0	1	1	1	1	NTPase
ArgK	PF03308.11	gi|557693947|ref|YP_008797001.1|	-	0.00076	18.3	0.2	0.002	16.9	0.1	1.8	1	1	0	1	1	1	1	ArgK	protein
AAA_5	PF07728.9	gi|557693947|ref|YP_008797001.1|	-	0.0015	18.2	0.0	0.0025	17.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_10	PF12846.2	gi|557693947|ref|YP_008797001.1|	-	0.0022	17.5	0.1	0.011	15.1	0.0	2.2	2	0	0	2	2	2	1	AAA-like	domain
Abhydrolase_5	PF12695.2	gi|557693947|ref|YP_008797001.1|	-	0.0037	17.0	0.6	0.036	13.8	0.4	2.1	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Glyco_transf_4	PF13439.1	gi|557693947|ref|YP_008797001.1|	-	0.0041	16.8	0.1	0.007	16.1	0.0	1.4	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
ATP_bind_1	PF03029.12	gi|557693947|ref|YP_008797001.1|	-	0.0042	16.6	0.4	0.019	14.5	0.1	2.3	2	1	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
AAA_28	PF13521.1	gi|557693947|ref|YP_008797001.1|	-	0.007	16.3	0.1	0.018	15.0	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|557693947|ref|YP_008797001.1|	-	0.007	15.7	0.0	0.027	13.8	0.0	1.9	2	0	0	2	2	2	1	Thymidylate	kinase
T2SE	PF00437.15	gi|557693947|ref|YP_008797001.1|	-	0.01	14.7	0.1	0.034	13.0	0.0	1.8	1	1	1	2	2	2	0	Type	II/IV	secretion	system	protein
ResIII	PF04851.10	gi|557693947|ref|YP_008797001.1|	-	0.011	15.6	0.0	0.016	15.0	0.0	1.3	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
TrwB_AAD_bind	PF10412.4	gi|557693947|ref|YP_008797001.1|	-	0.011	14.3	0.0	0.019	13.6	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_23	PF13476.1	gi|557693947|ref|YP_008797001.1|	-	0.012	15.9	0.0	0.021	15.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|557693947|ref|YP_008797001.1|	-	0.012	15.1	0.0	0.025	14.1	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|557693947|ref|YP_008797001.1|	-	0.016	15.4	0.0	0.023	14.9	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
SRPRB	PF09439.5	gi|557693947|ref|YP_008797001.1|	-	0.017	14.3	0.0	0.87	8.7	0.0	2.5	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
Arch_ATPase	PF01637.13	gi|557693947|ref|YP_008797001.1|	-	0.019	14.6	0.0	0.035	13.7	0.0	1.5	1	0	0	1	1	1	0	Archaeal	ATPase
LpxK	PF02606.9	gi|557693947|ref|YP_008797001.1|	-	0.019	13.9	0.1	0.052	12.5	0.0	1.7	2	0	0	2	2	2	0	Tetraacyldisaccharide-1-P	4'-kinase
AAA_25	PF13481.1	gi|557693947|ref|YP_008797001.1|	-	0.024	14.0	0.3	0.051	12.9	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_31	PF13614.1	gi|557693947|ref|YP_008797001.1|	-	0.031	14.1	0.1	0.28	11.1	0.0	2.4	3	0	0	3	3	3	0	AAA	domain
NACHT	PF05729.7	gi|557693947|ref|YP_008797001.1|	-	0.038	13.6	0.0	0.072	12.7	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
IstB_IS21	PF01695.12	gi|557693947|ref|YP_008797001.1|	-	0.04	13.3	0.1	0.13	11.7	0.0	1.8	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
ArsA_ATPase	PF02374.10	gi|557693947|ref|YP_008797001.1|	-	0.052	12.5	0.1	0.16	10.9	0.0	1.8	2	0	0	2	2	2	0	Anion-transporting	ATPase
AAA_21	PF13304.1	gi|557693947|ref|YP_008797001.1|	-	0.054	13.4	0.0	0.076	12.9	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_2	PF07724.9	gi|557693947|ref|YP_008797001.1|	-	0.054	13.3	0.0	0.11	12.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
AAA_11	PF13086.1	gi|557693947|ref|YP_008797001.1|	-	0.056	13.0	0.0	0.079	12.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ANF_receptor	PF01094.23	gi|557693947|ref|YP_008797001.1|	-	0.06	12.1	0.1	0.78	8.4	0.0	2.0	1	1	1	2	2	2	0	Receptor	family	ligand	binding	region
DAP3	PF10236.4	gi|557693947|ref|YP_008797001.1|	-	0.076	11.9	0.0	0.15	10.9	0.0	1.5	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
Rad17	PF03215.10	gi|557693947|ref|YP_008797001.1|	-	0.094	11.3	0.0	0.13	10.9	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
6PF2K	PF01591.13	gi|557693947|ref|YP_008797001.1|	-	0.094	11.7	0.0	0.13	11.2	0.0	1.3	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
AAA_18	PF13238.1	gi|557693947|ref|YP_008797001.1|	-	0.1	12.9	0.1	0.29	11.4	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
G-alpha	PF00503.15	gi|557693947|ref|YP_008797001.1|	-	0.11	11.1	0.0	0.15	10.7	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
SMC_N	PF02463.14	gi|557693947|ref|YP_008797001.1|	-	0.11	11.6	0.0	0.21	10.8	0.0	1.4	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
Zot	PF05707.7	gi|557693947|ref|YP_008797001.1|	-	0.13	11.7	0.0	0.19	11.1	0.0	1.4	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
Prefoldin	PF02996.12	gi|557693948|ref|YP_008797002.1|	-	7.9e-20	70.7	0.7	1.1e-19	70.2	0.5	1.2	1	0	0	1	1	1	1	Prefoldin	subunit
Exonuc_VII_S	PF02609.11	gi|557693948|ref|YP_008797002.1|	-	0.0081	15.9	3.4	0.0081	15.9	2.4	2.5	3	1	1	4	4	3	1	Exonuclease	VII	small	subunit
YjcZ	PF13990.1	gi|557693948|ref|YP_008797002.1|	-	0.015	14.4	0.9	0.015	14.4	0.6	1.9	1	1	1	2	2	2	0	YjcZ-like	protein
DUF3318	PF11780.3	gi|557693948|ref|YP_008797002.1|	-	0.032	13.8	0.3	0.04	13.4	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3318)
UPF0242	PF06785.6	gi|557693948|ref|YP_008797002.1|	-	0.041	12.5	3.8	0.053	12.2	2.6	1.2	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)
DUF2465	PF10239.4	gi|557693948|ref|YP_008797002.1|	-	0.05	12.8	1.0	0.054	12.6	0.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2465)
HMA	PF00403.21	gi|557693948|ref|YP_008797002.1|	-	0.053	13.6	0.3	2.8	8.1	0.0	2.3	2	1	0	2	2	2	0	Heavy-metal-associated	domain
TMF_DNA_bd	PF12329.3	gi|557693948|ref|YP_008797002.1|	-	0.056	13.2	7.5	1.5	8.6	1.2	2.2	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
DUF972	PF06156.8	gi|557693948|ref|YP_008797002.1|	-	0.066	13.5	3.0	0.52	10.6	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
GP41	PF00517.12	gi|557693948|ref|YP_008797002.1|	-	0.088	12.3	0.9	2.4	7.6	0.1	2.1	2	0	0	2	2	2	0	Retroviral	envelope	protein
Tropomyosin_1	PF12718.2	gi|557693948|ref|YP_008797002.1|	-	0.088	12.6	2.9	0.76	9.6	0.1	2.1	2	0	0	2	2	2	0	Tropomyosin	like
DivIC	PF04977.10	gi|557693948|ref|YP_008797002.1|	-	0.23	10.9	6.8	0.66	9.5	0.1	2.2	2	0	0	2	2	2	0	Septum	formation	initiator
IncA	PF04156.9	gi|557693948|ref|YP_008797002.1|	-	0.29	10.6	12.3	0.51	9.9	2.5	2.1	1	1	0	2	2	2	0	IncA	protein
DUF2205	PF10224.4	gi|557693948|ref|YP_008797002.1|	-	0.31	10.6	5.1	0.47	10.0	0.0	2.4	2	1	0	2	2	2	0	Predicted	coiled-coil	protein	(DUF2205)
Spc7	PF08317.6	gi|557693948|ref|YP_008797002.1|	-	0.43	9.2	2.6	3.2	6.3	0.1	2.0	2	0	0	2	2	2	0	Spc7	kinetochore	protein
TPR_MLP1_2	PF07926.7	gi|557693948|ref|YP_008797002.1|	-	0.43	10.3	6.2	2.9	7.6	0.5	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
BLOC1_2	PF10046.4	gi|557693948|ref|YP_008797002.1|	-	0.52	10.4	4.3	12	6.0	0.7	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Tropomyosin	PF00261.15	gi|557693948|ref|YP_008797002.1|	-	0.56	9.2	6.9	0.98	8.4	0.2	2.1	2	0	0	2	2	2	0	Tropomyosin
Lzipper-MIP1	PF14389.1	gi|557693948|ref|YP_008797002.1|	-	0.59	10.2	12.0	0.42	10.7	2.1	2.5	2	0	0	2	2	2	0	Leucine-zipper	of	ternary	complex	factor	MIP1
Baculo_PEP_C	PF04513.7	gi|557693948|ref|YP_008797002.1|	-	0.6	9.9	3.0	11	5.8	0.2	2.1	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
TBCA	PF02970.11	gi|557693948|ref|YP_008797002.1|	-	0.67	10.0	3.9	1.5	8.9	0.1	2.2	2	0	0	2	2	2	0	Tubulin	binding	cofactor	A
DUF904	PF06005.7	gi|557693948|ref|YP_008797002.1|	-	0.94	9.8	7.4	1.2	9.5	0.9	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
Med4	PF10018.4	gi|557693948|ref|YP_008797002.1|	-	1.5	8.1	7.3	1.7	8.0	0.9	2.1	2	0	0	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
L27_2	PF09045.5	gi|557693948|ref|YP_008797002.1|	-	1.7	8.2	5.7	13	5.4	0.8	3.2	2	1	1	3	3	3	0	L27_2
Prefoldin_2	PF01920.15	gi|557693948|ref|YP_008797002.1|	-	1.8	8.3	6.3	3	7.6	0.2	2.4	1	1	1	2	2	2	0	Prefoldin	subunit
DivIVA	PF05103.8	gi|557693948|ref|YP_008797002.1|	-	2.3	8.2	8.1	1.2	9.2	0.7	2.1	2	0	0	2	2	2	0	DivIVA	protein
AF0941-like	PF14591.1	gi|557693948|ref|YP_008797002.1|	-	2.4	8.2	5.4	4.4	7.3	1.6	2.0	1	1	1	2	2	2	0	AF0941-like
SlyX	PF04102.7	gi|557693948|ref|YP_008797002.1|	-	4.8	7.6	10.4	6.7	7.1	0.9	3.2	2	1	1	3	3	3	0	SlyX
DUF4140	PF13600.1	gi|557693948|ref|YP_008797002.1|	-	5.1	7.6	8.7	4.2	7.8	0.3	2.4	1	1	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
HisKA	PF00512.20	gi|557693948|ref|YP_008797002.1|	-	7.4	6.6	9.1	9.2	6.3	0.7	3.2	2	2	1	3	3	3	0	His	Kinase	A	(phospho-acceptor)	domain
eIF-6	PF01912.13	gi|557693949|ref|YP_008797003.1|	-	3.3e-56	189.5	4.0	4.1e-56	189.2	2.7	1.1	1	0	0	1	1	1	1	eIF-6	family
CW_binding_2	PF04122.7	gi|557693949|ref|YP_008797003.1|	-	0.28	11.3	1.7	2.7	8.2	0.1	2.4	1	1	0	2	2	2	0	Putative	cell	wall	binding	repeat	2
Ribosomal_L31e	PF01198.14	gi|557693950|ref|YP_008797004.1|	-	1.9e-18	65.9	1.1	2.1e-18	65.7	0.8	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L31e
DUF1116	PF06545.6	gi|557693951|ref|YP_008797005.1|	-	2.1e-85	285.2	0.0	2.9e-85	284.7	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1116)
Cyclase	PF04199.8	gi|557693952|ref|YP_008797006.1|	-	9.8e-35	119.7	0.0	1.3e-34	119.3	0.0	1.2	1	0	0	1	1	1	1	Putative	cyclase
Ligase_CoA	PF00549.14	gi|557693953|ref|YP_008797007.1|	-	1.4e-29	102.6	0.0	4.1e-29	101.1	0.0	1.8	2	0	0	2	2	2	1	CoA-ligase
CoA_binding	PF02629.14	gi|557693953|ref|YP_008797007.1|	-	1.3e-06	28.7	6.7	1.5e-05	25.3	0.2	3.2	3	0	0	3	3	3	2	CoA	binding	domain
DUF2877	PF11392.3	gi|557693955|ref|YP_008797009.1|	-	3.7e-13	49.6	0.0	5.8e-13	49.0	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2877)
Ald_Xan_dh_C2	PF02738.13	gi|557693957|ref|YP_008797011.1|	-	1.3e-134	449.5	0.0	1.6e-134	449.2	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557693957|ref|YP_008797011.1|	-	5.8e-26	90.7	0.0	5.8e-26	90.7	0.0	2.3	3	0	0	3	3	3	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Carboxyl_trans	PF01039.17	gi|557693958|ref|YP_008797012.1|	-	2.8e-112	375.6	0.8	3.4e-112	375.3	0.6	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|557693958|ref|YP_008797012.1|	-	1.3e-06	27.8	0.2	3.1e-06	26.5	0.0	1.7	2	0	0	2	2	2	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
Ald_Xan_dh_C2	PF02738.13	gi|557693959|ref|YP_008797013.1|	-	1.1e-128	429.9	0.0	1.6e-128	429.4	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557693959|ref|YP_008797013.1|	-	5.8e-28	97.1	0.0	1.5e-27	95.8	0.0	1.8	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
FAD_binding_5	PF00941.16	gi|557693960|ref|YP_008797014.1|	-	7.8e-50	168.6	0.0	1.1e-49	168.2	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|557693960|ref|YP_008797014.1|	-	1.4e-21	76.3	0.6	2.5e-21	75.5	0.4	1.4	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Fer2_2	PF01799.15	gi|557693961|ref|YP_008797015.1|	-	1.3e-26	92.2	0.0	1.3e-26	92.2	0.0	1.6	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|557693961|ref|YP_008797015.1|	-	1.1e-07	31.4	3.0	1.6e-07	31.0	0.2	2.1	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|557693961|ref|YP_008797015.1|	-	0.00052	19.8	0.0	0.00092	19.0	0.0	1.6	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|557693961|ref|YP_008797015.1|	-	0.021	14.6	0.3	0.075	12.8	0.2	2.0	1	1	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
ThiS	PF02597.15	gi|557693962|ref|YP_008797016.1|	-	1.8e-10	41.1	0.7	2.2e-09	37.6	0.5	2.0	1	1	0	1	1	1	1	ThiS	family
Urm1	PF09138.6	gi|557693962|ref|YP_008797016.1|	-	0.0041	17.1	0.0	0.0047	17.0	0.0	1.1	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
TGS	PF02824.16	gi|557693962|ref|YP_008797016.1|	-	0.024	14.4	0.0	0.033	14.0	0.0	1.3	1	0	0	1	1	1	0	TGS	domain
DUF3354	PF11834.3	gi|557693962|ref|YP_008797016.1|	-	0.1	12.2	0.0	1.3	8.7	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3354)
Amidohydro_4	PF13147.1	gi|557693963|ref|YP_008797017.1|	-	1.9e-17	64.2	0.1	3.2e-17	63.4	0.0	1.4	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|557693963|ref|YP_008797017.1|	-	1.7e-16	60.4	1.3	5.7e-08	32.3	0.0	2.7	1	1	1	2	2	2	2	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|557693963|ref|YP_008797017.1|	-	9.4e-08	31.7	0.0	1.8e-07	30.8	0.0	1.5	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|557693963|ref|YP_008797017.1|	-	1.8e-06	27.8	0.0	0.00044	20.0	0.0	2.2	1	1	0	2	2	2	2	Amidohydrolase	family
ABC_tran	PF00005.22	gi|557693964|ref|YP_008797018.1|	-	9.6e-51	171.6	0.0	2.7e-31	108.6	0.0	2.2	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|557693964|ref|YP_008797018.1|	-	2.3e-07	31.0	0.1	0.00093	19.2	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|557693964|ref|YP_008797018.1|	-	0.00039	19.5	0.0	0.019	14.0	0.0	2.2	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557693964|ref|YP_008797018.1|	-	0.0013	18.8	0.0	0.0091	16.1	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|557693964|ref|YP_008797018.1|	-	0.0055	17.0	0.2	0.013	15.8	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|557693964|ref|YP_008797018.1|	-	0.0064	16.0	0.0	0.022	14.2	0.0	1.9	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|557693964|ref|YP_008797018.1|	-	0.0067	15.6	0.1	0.041	13.0	0.0	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|557693964|ref|YP_008797018.1|	-	0.0094	15.2	0.0	1.4	8.1	0.0	2.5	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|557693964|ref|YP_008797018.1|	-	0.019	14.9	0.0	1	9.3	0.0	2.3	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|557693964|ref|YP_008797018.1|	-	0.1	11.9	0.0	0.5	9.7	0.0	2.1	3	0	0	3	3	3	0	AAA-like	domain
PK_C	PF02887.11	gi|557693964|ref|YP_008797018.1|	-	0.12	11.9	0.0	0.55	9.7	0.0	2.0	2	0	0	2	2	2	0	Pyruvate	kinase,	alpha/beta	domain
BPD_transp_2	PF02653.11	gi|557693965|ref|YP_008797019.1|	-	4.5e-35	120.9	24.7	4.5e-35	120.9	17.1	1.6	2	0	0	2	2	2	1	Branched-chain	amino	acid	transport	system	/	permease	component
BPD_transp_2	PF02653.11	gi|557693966|ref|YP_008797020.1|	-	1.6e-31	109.2	28.7	3.2e-31	108.2	19.9	1.5	1	1	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Bacteriocin_IIc	PF10439.4	gi|557693966|ref|YP_008797020.1|	-	3.4	7.8	9.7	2.8	8.1	1.9	2.5	2	0	0	2	2	2	0	Bacteriocin	class	II	with	double-glycine	leader	peptide
Bmp	PF02608.9	gi|557693967|ref|YP_008797021.1|	-	7.8e-24	83.9	0.0	1.1e-23	83.4	0.0	1.2	1	0	0	1	1	1	1	Basic	membrane	protein
Bmp	PF02608.9	gi|557693968|ref|YP_008797022.1|	-	1.2e-24	86.6	0.0	1.6e-24	86.1	0.0	1.1	1	0	0	1	1	1	1	Basic	membrane	protein
HEAT_2	PF13646.1	gi|557693968|ref|YP_008797022.1|	-	0.081	13.2	0.0	0.27	11.5	0.0	1.8	2	0	0	2	2	2	0	HEAT	repeats
ABC_tran	PF00005.22	gi|557693969|ref|YP_008797023.1|	-	5e-30	104.5	0.0	8.2e-17	61.7	0.0	2.6	3	0	0	3	3	3	2	ABC	transporter
AAA_23	PF13476.1	gi|557693969|ref|YP_008797023.1|	-	0.00019	21.8	0.0	0.00033	21.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_21	PF13304.1	gi|557693969|ref|YP_008797023.1|	-	0.00025	21.1	5.1	0.00098	19.1	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|557693969|ref|YP_008797023.1|	-	0.00048	19.4	0.7	0.59	9.3	0.1	2.4	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|557693969|ref|YP_008797023.1|	-	0.00078	19.5	0.8	0.0093	16.1	0.6	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557693969|ref|YP_008797023.1|	-	0.0022	17.4	0.0	0.0049	16.3	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|557693969|ref|YP_008797023.1|	-	0.0035	17.3	0.0	0.011	15.7	0.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|557693969|ref|YP_008797023.1|	-	0.0056	15.8	0.0	0.011	14.9	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|557693969|ref|YP_008797023.1|	-	0.0082	16.9	0.0	0.033	14.9	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|557693969|ref|YP_008797023.1|	-	0.018	14.4	0.1	0.46	9.8	0.0	2.1	2	0	0	2	2	2	0	AAA-like	domain
BPD_transp_2	PF02653.11	gi|557693970|ref|YP_008797024.1|	-	8.4e-59	198.7	76.4	1.6e-29	102.7	21.3	2.4	2	0	0	2	2	2	2	Branched-chain	amino	acid	transport	system	/	permease	component
Uso1_p115_C	PF04871.8	gi|557693971|ref|YP_008797025.1|	-	0.1	12.5	2.1	0.2	11.5	1.5	1.5	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
Polyoma_coat	PF00718.15	gi|557693971|ref|YP_008797025.1|	-	0.13	11.0	0.0	0.21	10.4	0.0	1.2	1	0	0	1	1	1	0	Polyomavirus	coat	protein
ELFV_dehydrog	PF00208.16	gi|557693972|ref|YP_008797026.1|	-	2.7e-53	181.0	0.0	3.5e-53	180.6	0.0	1.1	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|557693972|ref|YP_008797026.1|	-	7.3e-34	116.1	0.0	1.5e-33	115.1	0.0	1.5	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.14	gi|557693972|ref|YP_008797026.1|	-	0.0092	15.1	0.0	0.02	14.0	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|557693972|ref|YP_008797026.1|	-	0.068	13.4	0.0	0.18	12.0	0.0	1.7	2	0	0	2	2	2	0	Putative	NAD(P)-binding
Gp_dh_N	PF00044.19	gi|557693972|ref|YP_008797026.1|	-	0.14	12.1	0.4	0.63	9.9	0.2	2.0	1	1	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
DUF488	PF04343.8	gi|557693973|ref|YP_008797027.1|	-	6.7e-29	100.7	0.0	7.9e-29	100.5	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
UPF0066	PF01980.11	gi|557693974|ref|YP_008797028.1|	-	8.5e-37	125.7	0.0	1.1e-36	125.3	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
EamA	PF00892.15	gi|557693975|ref|YP_008797029.1|	-	5e-10	39.4	16.8	6e-10	39.2	11.7	1.1	1	0	0	1	1	1	1	EamA-like	transporter	family
EmrE	PF13536.1	gi|557693975|ref|YP_008797029.1|	-	0.097	12.8	19.0	0.099	12.8	10.5	2.1	1	1	1	2	2	2	0	Multidrug	resistance	efflux	transporter
TPT	PF03151.11	gi|557693975|ref|YP_008797029.1|	-	0.75	9.4	9.7	1.8	8.1	6.7	1.9	1	1	0	1	1	1	0	Triose-phosphate	Transporter	family
Pox_A14	PF05767.7	gi|557693975|ref|YP_008797029.1|	-	5.7	6.9	6.6	0.5	10.3	0.9	1.9	2	0	0	2	2	2	0	Poxvirus	virion	envelope	protein	A14
DUF202	PF02656.10	gi|557693975|ref|YP_008797029.1|	-	7	6.9	12.4	11	6.3	1.4	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
YfhO	PF09586.5	gi|557693975|ref|YP_008797029.1|	-	9.8	4.0	8.2	11	3.9	5.7	1.1	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
DUF650	PF04894.7	gi|557693976|ref|YP_008797030.1|	-	4.7e-72	242.7	0.0	6.4e-72	242.3	0.0	1.1	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|557693976|ref|YP_008797030.1|	-	3e-28	97.6	0.0	5.4e-28	96.8	0.0	1.4	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
T2SE	PF00437.15	gi|557693977|ref|YP_008797031.1|	-	5.4e-11	41.9	0.0	8.3e-11	41.2	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|557693977|ref|YP_008797031.1|	-	1.4e-05	25.8	0.0	4.3e-05	24.3	0.0	1.9	2	0	0	2	2	1	1	AAA	domain
AAA_18	PF13238.1	gi|557693977|ref|YP_008797031.1|	-	0.00015	22.0	0.0	0.00043	20.5	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|557693977|ref|YP_008797031.1|	-	0.00016	21.5	0.0	0.00035	20.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
RuvB_N	PF05496.7	gi|557693977|ref|YP_008797031.1|	-	0.002	17.1	0.0	0.016	14.2	0.0	2.1	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA	PF00004.24	gi|557693977|ref|YP_008797031.1|	-	0.0027	17.8	0.0	0.006	16.7	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|557693977|ref|YP_008797031.1|	-	0.0039	17.1	0.0	0.008	16.1	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557693977|ref|YP_008797031.1|	-	0.0043	17.1	0.0	0.0098	16.0	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|557693977|ref|YP_008797031.1|	-	0.0046	16.4	0.0	0.008	15.6	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_5	PF07728.9	gi|557693977|ref|YP_008797031.1|	-	0.0056	16.4	0.0	0.011	15.4	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|557693977|ref|YP_008797031.1|	-	0.0058	16.5	0.0	0.015	15.1	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557693977|ref|YP_008797031.1|	-	0.006	16.3	0.0	0.018	14.7	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|557693977|ref|YP_008797031.1|	-	0.0062	16.5	0.0	0.012	15.6	0.0	1.4	1	0	0	1	1	1	1	Sigma-54	interaction	domain
AAA_25	PF13481.1	gi|557693977|ref|YP_008797031.1|	-	0.01	15.2	0.0	0.024	14.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|557693977|ref|YP_008797031.1|	-	0.019	14.9	0.0	0.053	13.4	0.0	1.7	1	1	1	2	2	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|557693977|ref|YP_008797031.1|	-	0.029	13.8	0.0	0.15	11.5	0.0	2.0	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
ATP_bind_1	PF03029.12	gi|557693977|ref|YP_008797031.1|	-	0.038	13.5	0.0	0.06	12.8	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
RNA_helicase	PF00910.17	gi|557693977|ref|YP_008797031.1|	-	0.038	14.1	0.0	0.069	13.3	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
KTI12	PF08433.5	gi|557693977|ref|YP_008797031.1|	-	0.04	13.1	0.0	0.066	12.4	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.10	gi|557693977|ref|YP_008797031.1|	-	0.042	13.5	0.0	0.18	11.4	0.0	2.0	2	0	0	2	2	2	0	NTPase
eRF1_2	PF03464.10	gi|557693977|ref|YP_008797031.1|	-	0.047	14.0	0.0	1.1	9.6	0.0	2.3	2	0	0	2	2	2	0	eRF1	domain	2
NACHT	PF05729.7	gi|557693977|ref|YP_008797031.1|	-	0.048	13.3	0.0	0.087	12.4	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_29	PF13555.1	gi|557693977|ref|YP_008797031.1|	-	0.055	13.0	0.0	0.15	11.6	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Rad17	PF03215.10	gi|557693977|ref|YP_008797031.1|	-	0.068	11.8	0.0	0.12	10.9	0.0	1.3	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
Zeta_toxin	PF06414.7	gi|557693977|ref|YP_008797031.1|	-	0.075	12.1	0.0	0.26	10.3	0.0	1.8	2	0	0	2	2	2	0	Zeta	toxin
ArgK	PF03308.11	gi|557693977|ref|YP_008797031.1|	-	0.093	11.4	0.0	0.19	10.4	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
ABC_tran	PF00005.22	gi|557693977|ref|YP_008797031.1|	-	0.095	12.9	0.0	0.22	11.8	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
DUF815	PF05673.8	gi|557693977|ref|YP_008797031.1|	-	0.12	11.3	0.0	0.23	10.3	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA_30	PF13604.1	gi|557693977|ref|YP_008797031.1|	-	0.13	11.8	0.0	0.31	10.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|557693977|ref|YP_008797031.1|	-	0.13	11.6	0.0	0.19	11.1	0.0	1.3	1	0	0	1	1	1	0	AAA-like	domain
PTS_IIB	PF02302.12	gi|557693977|ref|YP_008797031.1|	-	0.16	12.4	0.0	31	5.1	0.0	2.9	3	0	0	3	3	2	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
Thymidylate_kin	PF02223.12	gi|557693977|ref|YP_008797031.1|	-	0.17	11.2	0.0	0.4	10.0	0.0	1.7	1	0	0	1	1	1	0	Thymidylate	kinase
PUA	PF01472.15	gi|557693978|ref|YP_008797032.1|	-	1.2e-17	63.3	0.2	2e-17	62.6	0.2	1.3	1	0	0	1	1	1	1	PUA	domain
ParA	PF10609.4	gi|557693979|ref|YP_008797033.1|	-	3.9e-34	116.3	0.1	1.8e-33	114.2	0.0	2.1	2	0	0	2	2	2	1	ParA/MinD	ATPase	like
DUF59	PF01883.14	gi|557693979|ref|YP_008797033.1|	-	4.8e-23	80.9	1.9	2.8e-22	78.4	0.1	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF59
CbiA	PF01656.18	gi|557693979|ref|YP_008797033.1|	-	2e-21	76.2	0.2	3.3e-21	75.5	0.1	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|557693979|ref|YP_008797033.1|	-	1.6e-09	37.8	0.0	2e-07	31.0	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
MipZ	PF09140.6	gi|557693979|ref|YP_008797033.1|	-	1e-06	28.0	0.0	2.1e-06	26.9	0.0	1.6	1	1	0	1	1	1	1	ATPase	MipZ
Fer4_NifH	PF00142.13	gi|557693979|ref|YP_008797033.1|	-	3.1e-06	26.5	0.1	0.045	12.9	0.0	2.2	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
VirC1	PF07015.6	gi|557693979|ref|YP_008797033.1|	-	7.3e-05	21.9	0.2	0.00012	21.2	0.1	1.2	1	0	0	1	1	1	1	VirC1	protein
ArsA_ATPase	PF02374.10	gi|557693979|ref|YP_008797033.1|	-	7.3e-05	21.9	2.8	0.00023	20.3	1.1	2.1	2	0	0	2	2	2	1	Anion-transporting	ATPase
AAA_26	PF13500.1	gi|557693979|ref|YP_008797033.1|	-	0.00056	19.5	0.3	0.032	13.8	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|557693979|ref|YP_008797033.1|	-	0.0046	16.3	0.1	0.011	15.1	0.1	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557693979|ref|YP_008797033.1|	-	0.0046	16.6	6.7	0.24	11.1	0.5	3.4	3	0	0	3	3	3	1	Part	of	AAA	domain
SRP54	PF00448.17	gi|557693979|ref|YP_008797033.1|	-	0.011	15.1	0.2	0.037	13.4	0.1	1.8	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
A2L_zn_ribbon	PF08792.5	gi|557693979|ref|YP_008797033.1|	-	0.016	14.6	0.2	0.028	13.8	0.1	1.3	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
PhoH	PF02562.11	gi|557693979|ref|YP_008797033.1|	-	0.081	12.1	0.4	1.8	7.7	0.1	2.1	2	0	0	2	2	2	0	PhoH-like	protein
AAA_10	PF12846.2	gi|557693979|ref|YP_008797033.1|	-	0.15	11.4	0.1	0.31	10.4	0.1	1.5	2	0	0	2	2	2	0	AAA-like	domain
YhjQ	PF06564.7	gi|557693979|ref|YP_008797033.1|	-	0.22	10.8	1.4	0.97	8.7	0.5	1.9	2	0	0	2	2	2	0	YhjQ	protein
CBS	PF00571.23	gi|557693980|ref|YP_008797034.1|	-	3.1e-50	167.7	12.7	4e-17	61.7	0.5	4.2	4	0	0	4	4	4	4	CBS	domain
DUF3816	PF12822.2	gi|557693981|ref|YP_008797035.1|	-	2.6e-05	24.1	24.5	6.4e-05	22.9	17.0	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3816)
Phage_holin_5	PF06946.6	gi|557693981|ref|YP_008797035.1|	-	0.47	10.6	0.1	0.47	10.6	0.0	2.8	2	1	2	4	4	4	0	Phage	holin
ADH_zinc_N	PF00107.21	gi|557693982|ref|YP_008797036.1|	-	4e-27	94.3	1.5	4e-27	94.3	1.0	1.7	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|557693982|ref|YP_008797036.1|	-	3.1e-26	91.2	1.9	9.2e-26	89.7	1.3	1.8	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.1	gi|557693982|ref|YP_008797036.1|	-	8.2e-07	29.9	0.1	2e-06	28.6	0.1	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
TrkA_N	PF02254.13	gi|557693982|ref|YP_008797036.1|	-	0.0014	18.6	0.4	0.0023	17.9	0.2	1.3	1	0	0	1	1	1	1	TrkA-N	domain
Methyltransf_18	PF12847.2	gi|557693982|ref|YP_008797036.1|	-	0.0025	18.3	0.0	0.0047	17.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
AlaDh_PNT_C	PF01262.16	gi|557693982|ref|YP_008797036.1|	-	0.0087	15.6	0.3	0.02	14.4	0.2	1.6	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|557693982|ref|YP_008797036.1|	-	0.034	13.3	0.3	0.068	12.3	0.0	1.5	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ADH_N_assoc	PF13823.1	gi|557693982|ref|YP_008797036.1|	-	0.041	13.5	0.3	0.1	12.2	0.2	1.7	1	0	0	1	1	1	0	Alcohol	dehydrogenase	GroES-associated
TPP_enzyme_M	PF00205.17	gi|557693982|ref|YP_008797036.1|	-	0.11	12.2	0.0	0.21	11.3	0.0	1.4	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	central	domain
Pyr_redox	PF00070.22	gi|557693982|ref|YP_008797036.1|	-	0.12	12.8	2.4	9.7	6.6	0.0	2.6	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Acylphosphatase	PF00708.13	gi|557693983|ref|YP_008797037.1|	-	2.7e-22	78.6	0.0	3.8e-22	78.1	0.0	1.3	1	0	0	1	1	1	1	Acylphosphatase
Methyltrn_RNA_3	PF02598.12	gi|557693984|ref|YP_008797038.1|	-	1.4e-46	159.2	0.0	1.5e-46	159.0	0.0	1.0	1	0	0	1	1	1	1	Putative	RNA	methyltransferase
DUF1093	PF06486.6	gi|557693984|ref|YP_008797038.1|	-	0.033	14.5	0.1	0.079	13.3	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1093)
SpoU_methylase	PF00588.14	gi|557693984|ref|YP_008797038.1|	-	0.065	13.1	0.0	0.65	9.8	0.0	2.2	2	0	0	2	2	2	0	SpoU	rRNA	Methylase	family
Archease	PF01951.11	gi|557693985|ref|YP_008797039.1|	-	6.7e-33	113.5	0.4	7.4e-33	113.3	0.3	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
Ets	PF00178.17	gi|557693985|ref|YP_008797039.1|	-	0.11	12.5	0.2	0.17	12.0	0.1	1.2	1	0	0	1	1	1	0	Ets-domain
HEPN	PF05168.9	gi|557693986|ref|YP_008797040.1|	-	1.3e-19	70.2	1.5	1.5e-19	69.9	1.0	1.1	1	0	0	1	1	1	1	HEPN	domain
Cytochrom_D1	PF02239.11	gi|557693986|ref|YP_008797040.1|	-	0.065	11.5	0.0	0.083	11.1	0.0	1.1	1	0	0	1	1	1	0	Cytochrome	D1	heme	domain
NTP_transf_2	PF01909.18	gi|557693987|ref|YP_008797041.1|	-	3.5e-10	40.0	0.1	4.5e-10	39.7	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
CarboxypepD_reg	PF13620.1	gi|557693989|ref|YP_008797043.1|	-	7.2e-12	45.1	21.6	9.7e-07	28.7	0.9	6.6	7	0	0	7	7	7	3	Carboxypeptidase	regulatory-like	domain
DUF824	PF05688.6	gi|557693989|ref|YP_008797043.1|	-	0.0017	17.9	3.1	22	4.7	0.0	5.7	5	0	0	5	5	5	1	Salmonella	repeat	of	unknown	function	(DUF824)
Big_1	PF02369.11	gi|557693989|ref|YP_008797043.1|	-	0.014	15.3	10.3	2.1	8.3	0.2	6.1	4	1	0	5	5	5	0	Bacterial	Ig-like	domain	(group	1)
IGPD	PF00475.13	gi|557693989|ref|YP_008797043.1|	-	0.62	9.9	0.0	1.3	8.8	0.0	1.4	1	0	0	1	1	1	0	Imidazoleglycerol-phosphate	dehydratase
PIN	PF01850.16	gi|557693990|ref|YP_008797044.1|	-	4.4e-12	46.4	0.1	5e-12	46.2	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
RHH_3	PF12651.2	gi|557693991|ref|YP_008797045.1|	-	0.024	14.3	0.1	0.098	12.4	0.0	1.9	1	1	1	2	2	2	0	Ribbon-helix-helix	domain
CcdA	PF07362.7	gi|557693991|ref|YP_008797045.1|	-	0.068	13.0	0.5	0.1	12.4	0.4	1.5	1	1	0	1	1	1	0	Post-segregation	antitoxin	CcdA
DUF217	PF02697.9	gi|557693992|ref|YP_008797046.1|	-	3.1e-18	65.7	0.3	3.5e-18	65.6	0.2	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
PIN	PF01850.16	gi|557693993|ref|YP_008797047.1|	-	3.8e-16	59.4	0.3	4.2e-16	59.3	0.2	1.0	1	0	0	1	1	1	1	PIN	domain
DUF2084	PF09857.4	gi|557693993|ref|YP_008797047.1|	-	0.12	12.0	0.0	0.24	11.1	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2084)
N6_N4_Mtase	PF01555.13	gi|557693995|ref|YP_008797049.1|	-	3.1e-16	59.5	0.0	6.7e-07	29.0	0.0	2.6	3	0	0	3	3	3	2	DNA	methylase
Methyltransf_26	PF13659.1	gi|557693995|ref|YP_008797049.1|	-	3.7e-13	49.5	0.9	1.3e-12	47.8	0.7	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|557693995|ref|YP_008797049.1|	-	1.5e-08	34.4	0.0	0.00014	21.5	0.0	2.6	2	1	1	3	3	3	2	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|557693995|ref|YP_008797049.1|	-	2e-05	25.0	0.1	0.12	12.9	0.0	3.0	3	0	0	3	3	3	2	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|557693995|ref|YP_008797049.1|	-	0.063	13.0	0.0	0.37	10.4	0.0	2.1	2	0	0	2	2	2	0	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|557693995|ref|YP_008797049.1|	-	0.14	11.8	0.1	16	5.0	0.0	2.5	3	0	0	3	3	3	0	Hypothetical	methyltransferase
Methyltransf_31	PF13847.1	gi|557693995|ref|YP_008797049.1|	-	0.16	11.5	0.0	0.5	9.9	0.0	1.8	2	0	0	2	2	2	0	Methyltransferase	domain
MethyltransfD12	PF02086.10	gi|557693995|ref|YP_008797049.1|	-	0.19	11.1	0.0	0.31	10.4	0.0	1.3	1	0	0	1	1	1	0	D12	class	N6	adenine-specific	DNA	methyltransferase
Pribosyltran	PF00156.22	gi|557693996|ref|YP_008797050.1|	-	1.9e-13	50.2	0.3	2.6e-13	49.8	0.2	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
Vps16_N	PF04841.8	gi|557693996|ref|YP_008797050.1|	-	0.13	10.7	0.0	0.14	10.6	0.0	1.1	1	0	0	1	1	1	0	Vps16,	N-terminal	region
Ribonuclease_P	PF00825.13	gi|557693997|ref|YP_008797051.1|	-	0.015	15.2	0.8	0.016	15.1	0.5	1.2	1	0	0	1	1	1	0	Ribonuclease	P
PfkB	PF00294.19	gi|557693999|ref|YP_008797053.1|	-	4e-52	177.2	0.0	4.6e-52	177.0	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
DHDPS	PF00701.17	gi|557694000|ref|YP_008797054.1|	-	1.5e-53	181.3	0.0	1.7e-53	181.1	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
adh_short	PF00106.20	gi|557694001|ref|YP_008797055.1|	-	2e-31	109.1	0.1	2.7e-31	108.7	0.1	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|557694001|ref|YP_008797055.1|	-	3.2e-19	69.6	0.0	3.8e-19	69.4	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|557694001|ref|YP_008797055.1|	-	4.2e-12	46.0	0.1	5.3e-12	45.7	0.0	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|557694001|ref|YP_008797055.1|	-	0.0045	16.4	0.9	0.029	13.8	0.6	2.0	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
HlyC	PF02794.11	gi|557694001|ref|YP_008797055.1|	-	0.073	12.6	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	RTX	toxin	acyltransferase	family
Peptidase_M20	PF01546.23	gi|557694002|ref|YP_008797056.1|	-	2.3e-14	53.3	0.0	3.4e-14	52.8	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|557694002|ref|YP_008797056.1|	-	6.7e-11	41.9	0.0	1.2e-10	41.1	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
DUF2092	PF09865.4	gi|557694002|ref|YP_008797056.1|	-	0.068	12.2	0.0	0.12	11.3	0.0	1.3	1	0	0	1	1	1	0	Predicted	periplasmic	protein	(DUF2092)
Ald_Xan_dh_C2	PF02738.13	gi|557694003|ref|YP_008797057.1|	-	1.9e-147	491.8	0.0	2.5e-147	491.5	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557694003|ref|YP_008797057.1|	-	4.9e-21	74.8	0.0	8.9e-21	74.0	0.0	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
BON	PF04972.12	gi|557694003|ref|YP_008797057.1|	-	0.089	12.5	0.0	0.82	9.4	0.0	2.4	2	0	0	2	2	2	0	BON	domain
PyrI	PF01948.13	gi|557694004|ref|YP_008797058.1|	-	4e-26	90.8	0.8	7.9e-26	89.9	0.1	1.8	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
Pribosyltran	PF00156.22	gi|557694004|ref|YP_008797058.1|	-	4.2e-11	42.6	0.0	7.9e-11	41.7	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|557694004|ref|YP_008797058.1|	-	1.5e-05	24.4	0.1	2.4e-05	23.7	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase
PyrI_C	PF02748.10	gi|557694004|ref|YP_008797058.1|	-	0.001	18.4	0.8	0.0019	17.5	0.5	1.5	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
UPRTase	PF14681.1	gi|557694004|ref|YP_008797058.1|	-	0.08	12.1	0.1	0.13	11.4	0.1	1.3	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
OMPdecase	PF00215.19	gi|557694005|ref|YP_008797059.1|	-	2.9e-24	85.7	0.0	3.5e-24	85.4	0.0	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Aldedh	PF00171.17	gi|557694006|ref|YP_008797060.1|	-	7.2e-139	463.0	0.0	9.7e-139	462.6	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
SPW	PF03779.9	gi|557694006|ref|YP_008797060.1|	-	0.061	12.7	1.0	0.13	11.6	0.7	1.5	1	0	0	1	1	1	0	SPW	repeat
LuxC	PF05893.9	gi|557694006|ref|YP_008797060.1|	-	0.1	11.3	0.0	0.27	9.9	0.0	1.6	1	1	0	1	1	1	0	Acyl-CoA	reductase	(LuxC)
Bac_luciferase	PF00296.15	gi|557694007|ref|YP_008797061.1|	-	5.1e-55	186.7	0.0	6.3e-55	186.4	0.0	1.0	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Rsbr_N	PF08678.5	gi|557694007|ref|YP_008797061.1|	-	0.046	13.6	0.0	0.1	12.4	0.0	1.5	1	0	0	1	1	1	0	Rsbr	N	terminal
Peripla_BP_6	PF13458.1	gi|557694008|ref|YP_008797062.1|	-	1.4e-62	212.0	0.0	1.6e-62	211.8	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
ANF_receptor	PF01094.23	gi|557694008|ref|YP_008797062.1|	-	2e-22	79.4	0.1	4.1e-22	78.4	0.0	1.4	1	1	0	1	1	1	1	Receptor	family	ligand	binding	region
Peripla_BP_5	PF13433.1	gi|557694008|ref|YP_008797062.1|	-	8.8e-22	77.3	0.0	1.3e-21	76.7	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein	domain
TroA	PF01297.12	gi|557694008|ref|YP_008797062.1|	-	0.073	12.2	0.2	0.25	10.5	0.1	1.8	1	1	0	1	1	1	0	Periplasmic	solute	binding	protein	family
Dynamin_M	PF01031.15	gi|557694008|ref|YP_008797062.1|	-	0.13	10.9	0.0	0.19	10.4	0.0	1.2	1	0	0	1	1	1	0	Dynamin	central	region
BPD_transp_2	PF02653.11	gi|557694009|ref|YP_008797063.1|	-	3e-32	111.6	44.8	3.5e-32	111.4	31.1	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
BPD_transp_2	PF02653.11	gi|557694010|ref|YP_008797064.1|	-	8.6e-36	123.2	32.3	1.2e-35	122.8	22.4	1.2	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Pam17	PF08566.5	gi|557694010|ref|YP_008797064.1|	-	1	9.0	6.6	9.6	5.8	1.2	2.4	2	1	0	2	2	2	0	Mitochondrial	import	protein	Pam17
ABC_tran	PF00005.22	gi|557694011|ref|YP_008797065.1|	-	5.6e-34	117.3	0.0	7.1e-34	117.0	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694011|ref|YP_008797065.1|	-	1.3e-13	51.5	0.0	2.2e-12	47.5	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557694011|ref|YP_008797065.1|	-	3.7e-05	23.1	0.1	7.1e-05	22.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|557694011|ref|YP_008797065.1|	-	0.00063	19.2	0.3	0.041	13.3	0.1	2.1	2	0	0	2	2	2	1	AAA-like	domain
SMC_N	PF02463.14	gi|557694011|ref|YP_008797065.1|	-	0.00066	18.9	0.0	0.0026	17.0	0.0	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|557694011|ref|YP_008797065.1|	-	0.0011	18.1	0.0	0.35	9.8	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|557694011|ref|YP_008797065.1|	-	0.0017	18.7	0.0	0.0027	18.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|557694011|ref|YP_008797065.1|	-	0.0022	18.1	0.2	0.0072	16.4	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|557694011|ref|YP_008797065.1|	-	0.0023	17.1	0.0	0.0037	16.4	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|557694011|ref|YP_008797065.1|	-	0.0023	17.8	0.1	0.027	14.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
MMR_HSR1	PF01926.18	gi|557694011|ref|YP_008797065.1|	-	0.0058	16.5	0.3	0.027	14.4	0.2	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_16	PF13191.1	gi|557694011|ref|YP_008797065.1|	-	0.0064	16.4	0.0	0.0081	16.1	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|557694011|ref|YP_008797065.1|	-	0.014	14.7	0.1	0.035	13.4	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.16	gi|557694011|ref|YP_008797065.1|	-	0.022	13.9	0.0	0.034	13.3	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_17	PF13207.1	gi|557694011|ref|YP_008797065.1|	-	0.025	15.3	0.5	0.056	14.2	0.2	2.0	2	1	0	2	2	1	0	AAA	domain
AAA_30	PF13604.1	gi|557694011|ref|YP_008797065.1|	-	0.034	13.7	0.0	0.047	13.2	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
Guanylate_kin	PF00625.16	gi|557694011|ref|YP_008797065.1|	-	0.034	13.5	0.0	0.054	12.9	0.0	1.3	1	0	0	1	1	1	0	Guanylate	kinase
AAA_33	PF13671.1	gi|557694011|ref|YP_008797065.1|	-	0.036	13.9	0.1	0.082	12.7	0.1	1.7	2	1	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|557694011|ref|YP_008797065.1|	-	0.039	13.6	0.1	0.085	12.5	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_ATPase	PF09818.4	gi|557694011|ref|YP_008797065.1|	-	0.041	12.4	0.0	0.43	9.0	0.1	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
PIF1	PF05970.9	gi|557694011|ref|YP_008797065.1|	-	0.048	12.6	0.0	0.063	12.2	0.0	1.2	1	0	0	1	1	1	0	PIF1-like	helicase
NACHT	PF05729.7	gi|557694011|ref|YP_008797065.1|	-	0.057	13.0	0.1	0.23	11.1	0.1	2.0	1	1	1	2	2	2	0	NACHT	domain
SbcCD_C	PF13558.1	gi|557694011|ref|YP_008797065.1|	-	0.081	12.8	0.0	0.99	9.3	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
Miro	PF08477.8	gi|557694011|ref|YP_008797065.1|	-	0.083	13.3	0.0	0.14	12.6	0.0	1.4	1	0	0	1	1	1	0	Miro-like	protein
Dynamin_N	PF00350.18	gi|557694011|ref|YP_008797065.1|	-	0.092	12.5	0.1	0.18	11.6	0.1	1.7	1	1	0	1	1	1	0	Dynamin	family
cobW	PF02492.14	gi|557694011|ref|YP_008797065.1|	-	0.096	12.1	0.2	0.74	9.2	0.1	2.0	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Arch_ATPase	PF01637.13	gi|557694011|ref|YP_008797065.1|	-	0.098	12.3	0.1	0.23	11.1	0.0	1.6	1	1	0	1	1	1	0	Archaeal	ATPase
T2SE	PF00437.15	gi|557694011|ref|YP_008797065.1|	-	0.11	11.3	0.0	0.17	10.7	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_24	PF13479.1	gi|557694011|ref|YP_008797065.1|	-	0.15	11.6	0.8	0.41	10.2	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|557694012|ref|YP_008797066.1|	-	1e-29	103.5	0.0	1.7e-29	102.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694012|ref|YP_008797066.1|	-	3.6e-12	46.8	0.5	8.9e-06	25.8	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
BCA_ABC_TP_C	PF12399.3	gi|557694012|ref|YP_008797066.1|	-	1.1e-05	24.9	0.0	2.9e-05	23.6	0.0	1.8	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_29	PF13555.1	gi|557694012|ref|YP_008797066.1|	-	0.00029	20.3	0.0	0.0034	16.8	0.0	2.2	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|557694012|ref|YP_008797066.1|	-	0.0011	18.1	0.2	0.11	11.7	0.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|557694012|ref|YP_008797066.1|	-	0.0047	16.6	0.1	0.011	15.4	0.0	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_23	PF13476.1	gi|557694012|ref|YP_008797066.1|	-	0.007	16.7	0.0	0.0086	16.4	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|557694012|ref|YP_008797066.1|	-	0.011	16.5	0.1	0.015	16.0	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|557694012|ref|YP_008797066.1|	-	0.012	15.8	0.0	0.052	13.7	0.0	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|557694012|ref|YP_008797066.1|	-	0.022	14.5	0.0	0.26	11.0	0.0	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
DUF258	PF03193.11	gi|557694012|ref|YP_008797066.1|	-	0.042	13.0	0.0	0.09	11.9	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
SbcCD_C	PF13558.1	gi|557694012|ref|YP_008797066.1|	-	0.045	13.6	0.1	0.44	10.4	0.0	2.3	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_25	PF13481.1	gi|557694012|ref|YP_008797066.1|	-	0.084	12.2	0.2	0.23	10.8	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|557694012|ref|YP_008797066.1|	-	0.088	12.6	0.0	0.12	12.2	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|557694012|ref|YP_008797066.1|	-	0.1	12.2	0.0	0.18	11.4	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
cobW	PF02492.14	gi|557694012|ref|YP_008797066.1|	-	0.11	11.9	0.2	0.57	9.6	0.1	2.0	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_10	PF12846.2	gi|557694012|ref|YP_008797066.1|	-	0.12	11.7	0.1	6.7	6.0	0.0	2.1	2	0	0	2	2	2	0	AAA-like	domain
HEPN	PF05168.9	gi|557694013|ref|YP_008797067.1|	-	3.5e-20	72.0	0.4	3.9e-20	71.8	0.3	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF2786	PF10979.3	gi|557694013|ref|YP_008797067.1|	-	0.07	12.8	2.1	0.15	11.7	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2786)
NTP_transf_2	PF01909.18	gi|557694014|ref|YP_008797068.1|	-	1.8e-12	47.4	0.2	2.3e-12	47.0	0.2	1.3	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|557694014|ref|YP_008797068.1|	-	1.5e-05	25.0	0.0	1.8e-05	24.7	0.0	1.1	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
PRA-PH	PF01503.12	gi|557694015|ref|YP_008797069.1|	-	3.4	8.0	4.9	8.7	6.7	3.4	1.7	1	1	0	1	1	1	0	Phosphoribosyl-ATP	pyrophosphohydrolase
Plasmid_stabil	PF05016.9	gi|557694016|ref|YP_008797070.1|	-	3.5e-06	27.3	2.7	4.6e-06	26.9	1.9	1.2	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
TcdB_N	PF12918.2	gi|557694016|ref|YP_008797070.1|	-	0.097	12.7	0.1	4.8	7.3	0.0	2.2	2	0	0	2	2	2	0	TcdB	toxin	N-terminal	helical	domain
Phage_BR0599	PF09356.5	gi|557694016|ref|YP_008797070.1|	-	0.13	12.4	0.0	0.18	11.9	0.0	1.2	1	0	0	1	1	1	0	Phage	conserved	hypothetical	protein	BR0599
DUF211	PF02680.9	gi|557694017|ref|YP_008797071.1|	-	7.4e-29	99.4	0.4	9.4e-29	99.0	0.3	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
HMA	PF00403.21	gi|557694017|ref|YP_008797071.1|	-	0.033	14.3	1.2	0.22	11.7	0.8	2.1	1	1	0	1	1	1	0	Heavy-metal-associated	domain
RVT_3	PF13456.1	gi|557694017|ref|YP_008797071.1|	-	0.089	12.5	0.0	0.12	12.2	0.0	1.1	1	0	0	1	1	1	0	Reverse	transcriptase-like
Amino_oxidase	PF01593.19	gi|557694018|ref|YP_008797072.1|	-	2e-25	89.8	0.0	3.1e-25	89.1	0.0	1.3	1	1	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.1	gi|557694018|ref|YP_008797072.1|	-	3.4e-14	52.6	1.0	6.8e-14	51.6	0.1	1.9	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|557694018|ref|YP_008797072.1|	-	2.5e-11	43.1	0.0	1e-06	27.9	0.0	2.4	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|557694018|ref|YP_008797072.1|	-	9.3e-08	31.5	0.1	4.4e-06	26.0	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|557694018|ref|YP_008797072.1|	-	1.5e-06	26.9	5.4	0.002	16.7	1.9	2.2	2	0	0	2	2	2	2	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|557694018|ref|YP_008797072.1|	-	1.7e-06	28.0	1.9	5.4e-05	23.1	0.7	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|557694018|ref|YP_008797072.1|	-	3.6e-06	26.0	6.7	9.6e-06	24.6	2.6	2.1	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|557694018|ref|YP_008797072.1|	-	6.3e-06	26.5	6.5	0.0018	18.6	2.4	2.7	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|557694018|ref|YP_008797072.1|	-	0.00015	20.9	0.3	0.00028	20.0	0.2	1.3	1	0	0	1	1	1	1	Thi4	family
AlaDh_PNT_C	PF01262.16	gi|557694018|ref|YP_008797072.1|	-	0.00069	19.2	0.6	0.0014	18.2	0.4	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox_3	PF13738.1	gi|557694018|ref|YP_008797072.1|	-	0.0011	19.0	3.1	0.014	15.4	1.1	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|557694018|ref|YP_008797072.1|	-	0.0014	17.7	1.7	0.0021	17.1	1.2	1.2	1	0	0	1	1	1	1	FAD	binding	domain
3HCDH_N	PF02737.13	gi|557694018|ref|YP_008797072.1|	-	0.0057	16.3	1.4	0.011	15.3	1.0	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|557694018|ref|YP_008797072.1|	-	0.0063	15.9	0.2	0.014	14.7	0.1	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|557694018|ref|YP_008797072.1|	-	0.016	14.9	0.9	0.034	13.8	0.6	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
FMO-like	PF00743.14	gi|557694018|ref|YP_008797072.1|	-	0.047	11.8	0.1	0.085	11.0	0.1	1.3	1	0	0	1	1	1	0	Flavin-binding	monooxygenase-like
GIDA	PF01134.17	gi|557694018|ref|YP_008797072.1|	-	0.055	12.3	7.6	0.054	12.3	3.2	2.3	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.1	gi|557694018|ref|YP_008797072.1|	-	0.079	12.7	1.4	0.56	9.9	0.3	2.6	3	0	0	3	3	3	0	FAD-NAD(P)-binding
NAD_binding_10	PF13460.1	gi|557694018|ref|YP_008797072.1|	-	0.16	11.9	0.0	0.29	11.1	0.0	1.4	1	0	0	1	1	1	0	NADH(P)-binding
ApbA	PF02558.11	gi|557694018|ref|YP_008797072.1|	-	0.21	11.0	1.3	0.43	9.9	0.9	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Trp_halogenase	PF04820.9	gi|557694018|ref|YP_008797072.1|	-	0.23	10.0	2.0	0.37	9.3	1.4	1.3	1	0	0	1	1	1	0	Tryptophan	halogenase
SQS_PSY	PF00494.14	gi|557694019|ref|YP_008797073.1|	-	3.1e-41	141.4	0.1	3.8e-41	141.1	0.1	1.0	1	0	0	1	1	1	1	Squalene/phytoene	synthase
UbiA	PF01040.13	gi|557694020|ref|YP_008797074.1|	-	1.5e-25	89.8	23.5	1.9e-25	89.5	16.3	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Adenosine_kin	PF04008.9	gi|557694022|ref|YP_008797076.1|	-	2.4e-71	238.2	0.1	2.7e-71	238.0	0.0	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
polyprenyl_synt	PF00348.12	gi|557694023|ref|YP_008797077.1|	-	1.8e-52	177.7	0.0	2.4e-52	177.3	0.0	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
Nitroreductase	PF00881.19	gi|557694024|ref|YP_008797078.1|	-	6.8e-12	45.5	0.1	2.3e-11	43.7	0.1	1.9	1	1	0	1	1	1	1	Nitroreductase	family
Tubulin	PF00091.20	gi|557694025|ref|YP_008797079.1|	-	8.8e-35	120.4	0.5	1e-33	117.0	0.4	2.1	1	1	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.3	gi|557694025|ref|YP_008797079.1|	-	2e-24	85.4	0.2	7.8e-24	83.5	0.0	2.1	2	0	0	2	2	2	1	FtsZ	family,	C-terminal	domain
DHC_N1	PF08385.7	gi|557694025|ref|YP_008797079.1|	-	0.14	10.5	0.0	0.21	9.9	0.0	1.1	1	0	0	1	1	1	0	Dynein	heavy	chain,	N-terminal	region	1
RHH_1	PF01402.16	gi|557694026|ref|YP_008797080.1|	-	2.1e-07	30.5	0.0	3e-07	30.0	0.0	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
Toprim_4	PF13662.1	gi|557694027|ref|YP_008797081.1|	-	7.8e-05	22.6	0.0	0.00034	20.5	0.0	1.9	1	1	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|557694027|ref|YP_008797081.1|	-	0.00034	20.5	0.0	0.0025	17.7	0.0	1.9	1	1	0	1	1	1	1	Toprim	domain
Toprim_2	PF13155.1	gi|557694027|ref|YP_008797081.1|	-	0.026	14.8	0.0	0.036	14.3	0.0	1.4	1	1	0	1	1	1	0	Toprim-like
HHH_5	PF14520.1	gi|557694027|ref|YP_008797081.1|	-	0.28	11.3	1.4	2.7	8.2	0.0	2.4	3	1	0	3	3	3	0	Helix-hairpin-helix	domain
GXGXG	PF01493.14	gi|557694028|ref|YP_008797082.1|	-	4e-29	101.0	9.2	9.6e-29	99.8	6.4	1.6	1	1	0	1	1	1	1	GXGXG	motif
GATase_6	PF13522.1	gi|557694028|ref|YP_008797082.1|	-	8.9e-16	58.0	0.0	2.7e-15	56.5	0.0	1.9	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|557694028|ref|YP_008797082.1|	-	2.4e-15	56.1	0.0	7.6e-14	51.1	0.0	2.1	2	0	0	2	2	2	1	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|557694028|ref|YP_008797082.1|	-	3.1e-06	26.9	0.0	9.7e-06	25.3	0.0	1.8	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|557694028|ref|YP_008797082.1|	-	1.9e-05	23.5	0.0	3.9e-05	22.4	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
Glu_synthase	PF01645.12	gi|557694029|ref|YP_008797083.1|	-	0.00054	18.9	0.1	0.006	15.5	0.1	2.3	2	1	1	3	3	3	1	Conserved	region	in	glutamate	synthase
Glu_syn_central	PF04898.9	gi|557694029|ref|YP_008797083.1|	-	0.0028	16.9	0.0	0.16	11.2	0.0	2.2	2	0	0	2	2	2	2	Glutamate	synthase	central	domain
FMN_dh	PF01070.13	gi|557694029|ref|YP_008797083.1|	-	0.031	13.1	0.3	0.047	12.5	0.2	1.3	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
TauE	PF01925.14	gi|557694030|ref|YP_008797084.1|	-	4.9e-36	124.3	41.1	6e-36	124.1	28.5	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF1634	PF07843.6	gi|557694031|ref|YP_008797085.1|	-	3.4e-14	52.3	5.1	3.8e-14	52.1	3.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1634)
Sensor	PF13796.1	gi|557694031|ref|YP_008797085.1|	-	0.29	10.7	6.5	0.13	11.8	3.1	1.5	1	1	0	1	1	1	0	Putative	sensor
DUF1980	PF09323.5	gi|557694031|ref|YP_008797085.1|	-	0.93	9.1	3.8	1.3	8.7	2.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1980)
Rieske	PF00355.21	gi|557694032|ref|YP_008797086.1|	-	8.1e-12	44.5	0.2	1.9e-11	43.3	0.1	1.6	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
TAT_signal	PF10518.4	gi|557694032|ref|YP_008797086.1|	-	0.08	12.9	0.8	0.18	11.9	0.6	1.6	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
N6_N4_Mtase	PF01555.13	gi|557694034|ref|YP_008797088.1|	-	3.4e-26	92.1	0.1	1e-12	48.0	0.0	2.1	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_26	PF13659.1	gi|557694034|ref|YP_008797088.1|	-	3.2e-14	52.9	0.0	4.9e-14	52.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|557694034|ref|YP_008797088.1|	-	6.1e-09	35.6	0.0	1.2e-08	34.7	0.0	1.5	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|557694034|ref|YP_008797088.1|	-	0.00029	21.2	0.0	0.73	10.3	0.0	2.5	3	0	0	3	3	3	2	Methyltransferase	domain
Thioredoxin_3	PF13192.1	gi|557694035|ref|YP_008797089.1|	-	1.6e-09	37.3	0.5	2.9e-09	36.5	0.4	1.5	1	1	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.19	gi|557694035|ref|YP_008797089.1|	-	2e-06	27.6	0.0	2.8e-06	27.2	0.0	1.2	1	0	0	1	1	1	1	Glutaredoxin
Thioredoxin_4	PF13462.1	gi|557694035|ref|YP_008797089.1|	-	0.0012	18.8	0.3	0.011	15.7	0.0	2.1	1	1	1	2	2	2	1	Thioredoxin
GST_N_3	PF13417.1	gi|557694035|ref|YP_008797089.1|	-	0.0047	17.1	0.0	0.0064	16.6	0.0	1.2	1	0	0	1	1	1	1	Glutathione	S-transferase,	N-terminal	domain
Thioredoxin	PF00085.15	gi|557694035|ref|YP_008797089.1|	-	0.0056	16.3	0.4	0.42	10.3	0.1	2.2	1	1	1	2	2	2	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|557694035|ref|YP_008797089.1|	-	0.0091	16.1	1.5	0.46	10.7	1.1	2.6	1	1	1	2	2	2	1	Thioredoxin-like	domain
GST_N_2	PF13409.1	gi|557694035|ref|YP_008797089.1|	-	0.035	14.0	0.0	0.045	13.7	0.0	1.2	1	0	0	1	1	1	0	Glutathione	S-transferase,	N-terminal	domain
TrbC_Ftype	PF09673.5	gi|557694035|ref|YP_008797089.1|	-	0.097	12.2	0.0	0.76	9.4	0.0	1.9	1	1	1	2	2	2	0	Type-F	conjugative	transfer	system	pilin	assembly	protein
ArsC	PF03960.10	gi|557694035|ref|YP_008797089.1|	-	0.11	12.5	0.1	0.13	12.3	0.1	1.4	1	1	0	1	1	1	0	ArsC	family
SNARE_assoc	PF09335.6	gi|557694036|ref|YP_008797090.1|	-	2.1e-11	44.0	10.6	2.6e-09	37.3	5.9	3.0	2	1	0	2	2	2	1	SNARE	associated	Golgi	protein
DUF1230	PF06799.6	gi|557694036|ref|YP_008797090.1|	-	0.29	11.0	2.3	0.39	10.5	1.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1230)
Oxidored_q2	PF00420.19	gi|557694036|ref|YP_008797090.1|	-	3.8	7.1	7.6	0.79	9.3	2.7	1.8	2	0	0	2	2	2	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF4147	PF13660.1	gi|557694037|ref|YP_008797091.1|	-	3.2e-70	235.9	0.0	4.6e-70	235.4	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|557694037|ref|YP_008797091.1|	-	2.6e-38	130.4	0.1	5.1e-38	129.4	0.1	1.5	1	0	0	1	1	1	1	MOFRL	family
DS	PF01916.12	gi|557694038|ref|YP_008797092.1|	-	9.1e-61	205.5	0.0	1.2e-60	205.2	0.0	1.1	1	0	0	1	1	1	1	Deoxyhypusine	synthase
Lysine_decarbox	PF03641.9	gi|557694039|ref|YP_008797093.1|	-	1.5e-07	31.2	0.0	2.9e-07	30.3	0.0	1.5	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
DAGK_cat	PF00781.19	gi|557694039|ref|YP_008797093.1|	-	0.00032	20.1	0.0	0.12	11.7	0.1	2.3	2	0	0	2	2	2	2	Diacylglycerol	kinase	catalytic	domain
adh_short	PF00106.20	gi|557694039|ref|YP_008797093.1|	-	0.098	12.5	0.0	0.17	11.8	0.0	1.4	1	0	0	1	1	1	0	short	chain	dehydrogenase
Topoisom_bac	PF01131.15	gi|557694040|ref|YP_008797094.1|	-	1.2e-85	287.7	0.0	1.7e-85	287.3	0.0	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|557694040|ref|YP_008797094.1|	-	3.6e-19	68.5	0.0	2e-18	66.1	0.0	2.3	2	0	0	2	2	2	1	Toprim	domain
DEAD	PF00270.24	gi|557694040|ref|YP_008797094.1|	-	1e-13	51.1	0.0	5.3e-13	48.8	0.0	2.1	1	1	1	2	2	2	1	DEAD/DEAH	box	helicase
PhoH	PF02562.11	gi|557694040|ref|YP_008797094.1|	-	1.6e-05	24.2	0.0	3.2e-05	23.2	0.0	1.5	1	0	0	1	1	1	1	PhoH-like	protein
ResIII	PF04851.10	gi|557694040|ref|YP_008797094.1|	-	0.00013	21.9	0.1	0.00031	20.6	0.0	1.6	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|557694040|ref|YP_008797094.1|	-	0.00018	21.2	0.0	0.58	10.0	0.0	3.7	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
zf-C4pol	PF14260.1	gi|557694040|ref|YP_008797094.1|	-	0.00052	19.9	0.4	0.45	10.5	0.1	2.5	2	0	0	2	2	2	2	C4-type	zinc-finger	of	DNA	polymerase	delta
AAA_19	PF13245.1	gi|557694040|ref|YP_008797094.1|	-	0.002	17.8	0.1	0.054	13.2	0.0	2.7	2	0	0	2	2	2	1	Part	of	AAA	domain
DZR	PF12773.2	gi|557694040|ref|YP_008797094.1|	-	0.021	14.6	5.5	0.2	11.4	0.6	2.5	2	0	0	2	2	2	0	Double	zinc	ribbon
DUF35_N	PF12172.3	gi|557694040|ref|YP_008797094.1|	-	0.026	14.4	4.7	0.073	13.0	0.7	2.6	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
AAA_25	PF13481.1	gi|557694040|ref|YP_008797094.1|	-	0.029	13.7	0.0	0.08	12.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Toprim_4	PF13662.1	gi|557694040|ref|YP_008797094.1|	-	0.033	14.1	0.1	0.51	10.3	0.0	2.9	3	0	0	3	3	2	0	Toprim	domain
SecA_DEAD	PF07517.9	gi|557694040|ref|YP_008797094.1|	-	0.07	12.4	0.0	0.2	10.8	0.0	1.8	1	0	0	1	1	1	0	SecA	DEAD-like	domain
AAA_30	PF13604.1	gi|557694040|ref|YP_008797094.1|	-	0.071	12.6	0.0	0.15	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF1400	PF07176.6	gi|557694040|ref|YP_008797094.1|	-	0.12	12.3	0.0	3.3	7.6	0.0	2.5	2	0	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF1400)
IstB_IS21	PF01695.12	gi|557694040|ref|YP_008797094.1|	-	0.13	11.6	0.0	0.3	10.4	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF1272	PF06906.6	gi|557694040|ref|YP_008797094.1|	-	0.16	11.8	3.9	7.4	6.4	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
zf-ribbon_3	PF13248.1	gi|557694040|ref|YP_008797094.1|	-	0.38	10.0	11.1	0.47	9.7	1.7	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc-ribbons_6	PF07191.7	gi|557694040|ref|YP_008797094.1|	-	0.62	9.9	4.8	1.7	8.5	0.6	2.3	2	0	0	2	2	2	0	zinc-ribbons
Prok-RING_1	PF14446.1	gi|557694040|ref|YP_008797094.1|	-	1.2	8.9	7.9	1	9.1	1.2	2.4	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
Aconitase	PF00330.15	gi|557694041|ref|YP_008797095.1|	-	1.5e-160	534.6	0.0	1.7e-160	534.5	0.0	1.0	1	0	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.8	gi|557694041|ref|YP_008797095.1|	-	0.00073	18.2	0.0	0.0014	17.2	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
ParBc	PF02195.13	gi|557694042|ref|YP_008797096.1|	-	1.3e-16	60.4	0.3	2.3e-16	59.6	0.2	1.4	1	0	0	1	1	1	1	ParB-like	nuclease	domain
HTH_17	PF12728.2	gi|557694042|ref|YP_008797096.1|	-	0.00027	21.1	0.0	0.00068	19.8	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|557694042|ref|YP_008797096.1|	-	0.0013	18.3	0.0	0.0041	16.7	0.0	1.9	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_Tnp_1	PF01527.15	gi|557694042|ref|YP_008797096.1|	-	0.0015	18.4	0.1	0.0041	17.0	0.1	1.7	1	1	0	1	1	1	1	Transposase
GPP34	PF05719.6	gi|557694042|ref|YP_008797096.1|	-	0.0027	17.8	0.3	0.0083	16.2	0.1	1.9	1	1	1	2	2	2	1	Golgi	phosphoprotein	3	(GPP34)
HTH_29	PF13551.1	gi|557694042|ref|YP_008797096.1|	-	0.0052	16.9	0.2	0.012	15.7	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_22	PF13309.1	gi|557694042|ref|YP_008797096.1|	-	0.033	13.9	0.1	1.7	8.4	0.0	2.7	2	0	0	2	2	2	0	HTH	domain
Phage_AlpA	PF05930.7	gi|557694042|ref|YP_008797096.1|	-	0.06	13.0	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Prophage	CP4-57	regulatory	protein	(AlpA)
ABC_tran	PF00005.22	gi|557694044|ref|YP_008797098.1|	-	1.1e-07	32.2	0.0	0.003	17.8	0.0	2.3	1	1	1	2	2	2	2	ABC	transporter
Acetyltransf_1	PF00583.19	gi|557694044|ref|YP_008797098.1|	-	2.6e-06	27.3	0.3	3.2e-05	23.8	0.0	2.7	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|557694044|ref|YP_008797098.1|	-	1.9e-05	24.7	0.0	6.3e-05	23.0	0.0	1.9	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
AAA_22	PF13401.1	gi|557694044|ref|YP_008797098.1|	-	0.00014	22.0	0.0	0.00043	20.4	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|557694044|ref|YP_008797098.1|	-	0.00054	20.0	0.1	0.0014	18.6	0.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
Acetyltransf_CG	PF14542.1	gi|557694044|ref|YP_008797098.1|	-	0.00072	19.3	0.0	0.0017	18.2	0.0	1.6	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
DUF3798	PF12683.2	gi|557694044|ref|YP_008797098.1|	-	0.004	16.2	0.0	0.0068	15.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3798)
Acetyltransf_9	PF13527.1	gi|557694044|ref|YP_008797098.1|	-	0.0042	16.9	0.2	0.042	13.6	0.0	2.5	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
NACHT	PF05729.7	gi|557694044|ref|YP_008797098.1|	-	0.0095	15.6	0.0	0.022	14.4	0.0	1.6	1	0	0	1	1	1	1	NACHT	domain
UPF0079	PF02367.12	gi|557694044|ref|YP_008797098.1|	-	0.015	14.8	0.0	0.038	13.6	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
PIF1	PF05970.9	gi|557694044|ref|YP_008797098.1|	-	0.016	14.1	0.0	0.025	13.5	0.0	1.2	1	0	0	1	1	1	0	PIF1-like	helicase
AAA_18	PF13238.1	gi|557694044|ref|YP_008797098.1|	-	0.029	14.6	0.0	0.058	13.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|557694044|ref|YP_008797098.1|	-	0.062	13.4	0.0	0.21	11.8	0.0	1.8	2	0	0	2	2	2	0	RNA	helicase
AAA_10	PF12846.2	gi|557694044|ref|YP_008797098.1|	-	0.064	12.6	0.6	2.5	7.4	0.0	2.2	1	1	1	2	2	2	0	AAA-like	domain
AAA	PF00004.24	gi|557694044|ref|YP_008797098.1|	-	0.085	13.0	0.0	0.25	11.5	0.0	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2075	PF09848.4	gi|557694044|ref|YP_008797098.1|	-	0.17	10.8	0.0	0.26	10.2	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Phage_portal	PF04860.7	gi|557694047|ref|YP_008797101.1|	-	1.4e-19	70.0	0.0	1.7e-19	69.7	0.0	1.1	1	0	0	1	1	1	1	Phage	portal	protein
Peptidase_U35	PF04586.12	gi|557694049|ref|YP_008797103.1|	-	1.2e-11	44.9	0.0	1.6e-11	44.5	0.0	1.1	1	0	0	1	1	1	1	Caudovirus	prohead	protease
Peptidase_U35_2	PF14550.1	gi|557694049|ref|YP_008797103.1|	-	0.039	13.5	0.1	0.19	11.3	0.0	2.2	1	1	1	2	2	2	0	Putative	phage	protease	XkdF
Phage_capsid	PF05065.8	gi|557694050|ref|YP_008797104.1|	-	1.8e-18	66.7	0.2	2.2e-18	66.4	0.1	1.0	1	0	0	1	1	1	1	Phage	capsid	family
DUF2460	PF09343.5	gi|557694051|ref|YP_008797105.1|	-	0.045	13.0	0.0	0.078	12.3	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	2217	(DUF2460)
Peptidase_S8	PF00082.17	gi|557694053|ref|YP_008797107.1|	-	3.8e-23	82.0	0.5	1.9e-22	79.7	0.3	1.9	1	1	0	1	1	1	1	Subtilase	family
DUF2001	PF09393.5	gi|557694054|ref|YP_008797108.1|	-	0.11	12.2	0.0	2.3	7.9	0.0	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2001)
HK97-gp10_like	PF04883.7	gi|557694056|ref|YP_008797110.1|	-	8.9e-15	55.3	0.2	1.4e-14	54.7	0.1	1.3	1	0	0	1	1	1	1	Bacteriophage	HK97-gp10,	putative	tail-component
Dermcidin	PF15291.1	gi|557694056|ref|YP_008797110.1|	-	0.13	12.5	0.2	0.25	11.5	0.0	1.6	2	0	0	2	2	2	0	Dermcidin,	antibiotic	peptide
SNase	PF00565.12	gi|557694057|ref|YP_008797111.1|	-	1e-12	48.2	0.0	1.6e-12	47.6	0.0	1.3	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
DUF240	PF03086.9	gi|557694057|ref|YP_008797111.1|	-	0.18	11.4	0.1	0.18	11.4	0.1	1.5	2	0	0	2	2	2	0	MG032/MG096/MG288	family	2
PhageMin_Tail	PF10145.4	gi|557694058|ref|YP_008797112.1|	-	1.8e-26	93.0	13.6	1.8e-26	93.0	9.4	5.0	2	2	3	5	5	5	1	Phage-related	minor	tail	protein
MarR_2	PF12802.2	gi|557694058|ref|YP_008797112.1|	-	0.11	12.1	2.0	0.56	9.9	0.3	3.1	2	0	0	2	2	2	0	MarR	family
Sipho_Gp37	PF14594.1	gi|557694059|ref|YP_008797113.1|	-	0.007	15.6	0.0	0.034	13.3	0.0	2.1	1	1	0	1	1	1	1	Siphovirus	ReqiPepy6	Gp37-like	protein
Peptidase_S74	PF13884.1	gi|557694061|ref|YP_008797115.1|	-	0.00023	21.2	0.0	0.00039	20.4	0.0	1.4	1	0	0	1	1	1	1	Chaperone	of	endosialidase
Chibby	PF14645.1	gi|557694061|ref|YP_008797115.1|	-	0.0043	16.9	0.2	0.0093	15.8	0.2	1.5	1	0	0	1	1	1	1	Chibby	family
HAP1_N	PF04849.8	gi|557694061|ref|YP_008797115.1|	-	0.017	14.0	0.2	0.025	13.5	0.1	1.2	1	0	0	1	1	1	0	HAP1	N-terminal	conserved	region
bZIP_1	PF00170.16	gi|557694061|ref|YP_008797115.1|	-	0.03	14.2	2.5	0.074	13.0	1.7	1.6	1	0	0	1	1	1	0	bZIP	transcription	factor
bZIP_2	PF07716.10	gi|557694061|ref|YP_008797115.1|	-	0.031	14.1	3.2	0.066	13.0	2.2	1.6	1	0	0	1	1	1	0	Basic	region	leucine	zipper
CtIP_N	PF10482.4	gi|557694061|ref|YP_008797115.1|	-	0.054	13.2	0.1	0.14	11.9	0.1	1.7	2	0	0	2	2	2	0	Tumour-suppressor	protein	CtIP	N-terminal	domain
DivIVA	PF05103.8	gi|557694061|ref|YP_008797115.1|	-	0.066	13.2	2.7	0.086	12.8	1.8	1.2	1	0	0	1	1	1	0	DivIVA	protein
HALZ	PF02183.13	gi|557694061|ref|YP_008797115.1|	-	0.11	12.2	3.4	0.25	11.0	2.3	1.6	1	0	0	1	1	1	0	Homeobox	associated	leucine	zipper
DivIC	PF04977.10	gi|557694061|ref|YP_008797115.1|	-	0.23	10.9	1.9	0.41	10.1	1.3	1.4	1	0	0	1	1	1	0	Septum	formation	initiator
Terminase_6	PF03237.10	gi|557694063|ref|YP_008797117.1|	-	1e-29	103.4	0.0	1.2e-29	103.2	0.0	1.1	1	0	0	1	1	1	1	Terminase-like	family
Terminase_1	PF03354.10	gi|557694063|ref|YP_008797117.1|	-	1e-08	34.0	0.0	0.00026	19.5	0.0	2.1	2	0	0	2	2	2	2	Phage	Terminase
Helicase_RecD	PF05127.9	gi|557694063|ref|YP_008797117.1|	-	0.0016	18.1	0.1	0.0046	16.6	0.0	1.7	2	0	0	2	2	2	1	Helicase
EntA_Immun	PF08951.5	gi|557694063|ref|YP_008797117.1|	-	0.043	13.9	1.0	0.097	12.8	0.7	1.6	1	0	0	1	1	1	0	Enterocin	A	Immunity
Aldo_ket_red	PF00248.16	gi|557694064|ref|YP_008797118.1|	-	5.7e-78	261.5	0.0	6.4e-78	261.4	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
ABC2_membrane	PF01061.19	gi|557694065|ref|YP_008797119.1|	-	3.6e-32	111.2	22.7	3.6e-32	111.2	15.7	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|557694065|ref|YP_008797119.1|	-	3.3e-11	42.8	26.3	3.3e-11	42.8	18.3	1.7	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|557694065|ref|YP_008797119.1|	-	6.6e-07	28.4	20.8	1e-06	27.8	14.4	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|557694065|ref|YP_008797119.1|	-	1.1e-06	28.0	22.6	1.4e-06	27.6	15.7	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|557694065|ref|YP_008797119.1|	-	0.0025	17.1	6.2	0.0025	17.1	4.3	1.9	2	1	0	2	2	2	1	ABC-2	family	transporter	protein
DUF3814	PF12769.2	gi|557694065|ref|YP_008797119.1|	-	0.009	16.1	1.9	0.097	12.8	0.7	2.9	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF3814)
ABC_tran	PF00005.22	gi|557694066|ref|YP_008797120.1|	-	4.4e-30	104.7	0.0	6e-30	104.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694066|ref|YP_008797120.1|	-	3e-14	53.6	0.0	8.1e-10	39.1	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
DUF4162	PF13732.1	gi|557694066|ref|YP_008797120.1|	-	1.1e-06	28.9	0.0	2.4e-06	27.9	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.1	gi|557694066|ref|YP_008797120.1|	-	0.00016	22.0	0.1	0.00023	21.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557694066|ref|YP_008797120.1|	-	0.0017	17.8	0.5	0.0031	17.0	0.3	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|557694066|ref|YP_008797120.1|	-	0.0051	16.7	0.0	0.0076	16.1	0.0	1.4	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
SRP54	PF00448.17	gi|557694066|ref|YP_008797120.1|	-	0.0082	15.6	0.3	0.015	14.7	0.2	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_15	PF13175.1	gi|557694066|ref|YP_008797120.1|	-	0.016	14.3	0.0	0.21	10.5	0.0	2.0	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_25	PF13481.1	gi|557694066|ref|YP_008797120.1|	-	0.033	13.5	0.3	5.1	6.4	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|557694066|ref|YP_008797120.1|	-	0.086	12.9	0.3	0.68	10.0	0.2	2.1	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|557694066|ref|YP_008797120.1|	-	0.089	12.9	0.5	1.1	9.4	0.3	2.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|557694066|ref|YP_008797120.1|	-	0.1	12.5	0.1	0.18	11.7	0.1	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
PadR	PF03551.9	gi|557694067|ref|YP_008797121.1|	-	3.9e-19	68.1	0.0	6.8e-19	67.4	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
AphA_like	PF14557.1	gi|557694067|ref|YP_008797121.1|	-	0.0018	17.8	0.1	0.0029	17.1	0.1	1.4	1	1	0	1	1	1	1	Putative	AphA-like	transcriptional	regulator
FUR	PF01475.14	gi|557694067|ref|YP_008797121.1|	-	0.011	15.7	0.0	0.017	15.0	0.0	1.2	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
TrmB	PF01978.14	gi|557694067|ref|YP_008797121.1|	-	0.026	14.2	0.0	0.12	12.0	0.0	2.0	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF505	PF04458.7	gi|557694067|ref|YP_008797121.1|	-	0.032	12.3	0.0	0.047	11.8	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
HTH_5	PF01022.15	gi|557694067|ref|YP_008797121.1|	-	0.098	12.3	0.0	1.3	8.7	0.0	2.3	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Penicillinase_R	PF03965.11	gi|557694067|ref|YP_008797121.1|	-	0.099	12.7	0.0	0.21	11.6	0.0	1.6	1	0	0	1	1	1	0	Penicillinase	repressor
HTH_45	PF14947.1	gi|557694067|ref|YP_008797121.1|	-	0.1	12.4	0.0	0.21	11.3	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
Replic_Relax	PF13814.1	gi|557694067|ref|YP_008797121.1|	-	0.15	11.9	0.1	0.24	11.2	0.0	1.5	2	0	0	2	2	2	0	Replication-relaxation
DUF2274	PF10038.4	gi|557694068|ref|YP_008797122.1|	-	0.0086	16.1	0.1	0.017	15.2	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2274)
Pyridox_oxidase	PF01243.15	gi|557694069|ref|YP_008797123.1|	-	1.7e-14	53.5	0.0	2.1e-14	53.2	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyridox_ox_2	PF12900.2	gi|557694069|ref|YP_008797123.1|	-	0.0012	18.6	0.1	0.0016	18.2	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
KOW	PF00467.24	gi|557694069|ref|YP_008797123.1|	-	0.41	10.4	2.4	12	5.8	0.0	3.0	4	0	0	4	4	4	0	KOW	motif
HTH_IclR	PF09339.5	gi|557694070|ref|YP_008797124.1|	-	1.1e-06	28.1	3.3	1.6e-05	24.3	0.5	2.9	3	0	0	3	3	3	1	IclR	helix-turn-helix	domain
TrmB	PF01978.14	gi|557694070|ref|YP_008797124.1|	-	0.00013	21.5	0.0	0.074	12.7	0.0	3.5	3	0	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|557694070|ref|YP_008797124.1|	-	0.00022	21.2	0.2	1.4	9.0	0.0	3.2	3	1	0	3	3	3	2	Transcriptional	regulator
MarR_2	PF12802.2	gi|557694070|ref|YP_008797124.1|	-	0.00088	18.9	2.8	0.15	11.7	0.2	3.1	2	1	1	3	3	3	2	MarR	family
HTH_9	PF08221.6	gi|557694070|ref|YP_008797124.1|	-	0.0014	18.4	0.0	0.0047	16.7	0.0	1.9	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|557694070|ref|YP_008797124.1|	-	0.0015	18.2	0.1	0.058	13.1	0.0	2.8	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_29	PF13551.1	gi|557694070|ref|YP_008797124.1|	-	0.0086	16.2	0.4	7.8	6.6	0.0	3.3	3	0	0	3	3	3	1	Winged	helix-turn	helix
HTH_20	PF12840.2	gi|557694070|ref|YP_008797124.1|	-	0.018	14.8	0.4	1.6	8.5	0.1	3.1	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_AraC	PF00165.18	gi|557694070|ref|YP_008797124.1|	-	0.02	14.7	0.0	3.2	7.7	0.0	2.6	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
MarR	PF01047.17	gi|557694070|ref|YP_008797124.1|	-	0.026	14.2	0.1	0.29	10.8	0.1	2.3	2	0	0	2	2	2	0	MarR	family
FaeA	PF04703.7	gi|557694070|ref|YP_008797124.1|	-	0.07	13.2	0.0	0.33	11.1	0.0	2.1	2	0	0	2	2	2	0	FaeA-like	protein
HTH_5	PF01022.15	gi|557694070|ref|YP_008797124.1|	-	0.075	12.7	0.0	3	7.5	0.0	3.2	4	0	0	4	4	4	0	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|557694070|ref|YP_008797124.1|	-	0.1	12.9	0.2	0.41	10.9	0.1	2.1	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
NTP_transferase	PF00483.18	gi|557694071|ref|YP_008797125.1|	-	2.4e-26	92.5	0.0	5.1e-26	91.4	0.0	1.5	1	1	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|557694071|ref|YP_008797125.1|	-	3e-13	50.1	0.0	4.1e-13	49.6	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
DUF651	PF04895.7	gi|557694071|ref|YP_008797125.1|	-	0.074	12.6	0.1	0.16	11.6	0.0	1.6	1	1	0	1	1	1	0	Archaeal	protein	of	unknown	function	(DUF651)
ABC_tran	PF00005.22	gi|557694072|ref|YP_008797126.1|	-	1e-25	90.5	0.0	1.6e-25	89.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694072|ref|YP_008797126.1|	-	5e-15	56.2	1.7	1.7e-07	31.5	0.6	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|557694072|ref|YP_008797126.1|	-	5e-08	32.4	0.1	1.5e-06	27.5	0.1	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557694072|ref|YP_008797126.1|	-	9.7e-05	22.5	0.4	0.42	10.7	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|557694072|ref|YP_008797126.1|	-	0.00017	21.0	0.8	0.00046	19.6	0.5	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|557694072|ref|YP_008797126.1|	-	0.00094	19.0	0.3	0.0035	17.2	0.2	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|557694072|ref|YP_008797126.1|	-	0.0029	17.5	0.0	0.012	15.4	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|557694072|ref|YP_008797126.1|	-	0.012	14.8	0.1	3.5	6.8	0.0	2.1	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|557694072|ref|YP_008797126.1|	-	0.013	16.2	0.2	0.043	14.6	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|557694072|ref|YP_008797126.1|	-	0.016	15.2	2.7	0.26	11.2	1.9	2.2	1	1	0	1	1	1	0	AAA	ATPase	domain
MutS_V	PF00488.16	gi|557694072|ref|YP_008797126.1|	-	0.034	13.5	0.0	0.079	12.3	0.0	1.5	1	0	0	1	1	1	0	MutS	domain	V
AAA_28	PF13521.1	gi|557694072|ref|YP_008797126.1|	-	0.042	13.7	0.1	0.32	10.9	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|557694072|ref|YP_008797126.1|	-	0.042	14.1	0.0	0.069	13.4	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|557694072|ref|YP_008797126.1|	-	0.044	14.2	0.0	0.12	12.9	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_30	PF13604.1	gi|557694072|ref|YP_008797126.1|	-	0.07	12.7	0.1	0.14	11.7	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
NAD_binding_10	PF13460.1	gi|557694072|ref|YP_008797126.1|	-	0.073	13.0	0.0	0.18	11.8	0.0	1.6	1	0	0	1	1	1	0	NADH(P)-binding
AAA	PF00004.24	gi|557694072|ref|YP_008797126.1|	-	0.087	13.0	0.4	2.1	8.5	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SbcCD_C	PF13558.1	gi|557694072|ref|YP_008797126.1|	-	0.095	12.6	0.0	0.26	11.2	0.0	1.8	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
UPF0079	PF02367.12	gi|557694072|ref|YP_008797126.1|	-	0.1	12.2	0.1	0.21	11.2	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
FecCD	PF01032.13	gi|557694073|ref|YP_008797127.1|	-	3.5e-75	252.7	39.2	4.4e-75	252.4	27.2	1.0	1	0	0	1	1	1	1	FecCD	transport	family
Peripla_BP_2	PF01497.13	gi|557694074|ref|YP_008797128.1|	-	2.4e-27	95.5	0.0	3.6e-27	95.0	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
FAD_binding_5	PF00941.16	gi|557694075|ref|YP_008797129.1|	-	5.5e-35	120.3	0.2	8.6e-35	119.6	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|557694075|ref|YP_008797129.1|	-	6.9e-13	48.4	0.0	1.3e-12	47.4	0.0	1.4	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Fer2_2	PF01799.15	gi|557694076|ref|YP_008797130.1|	-	3.8e-32	110.0	0.0	6.4e-32	109.2	0.0	1.4	1	0	0	1	1	1	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|557694076|ref|YP_008797130.1|	-	2.4e-10	40.0	2.0	3.3e-10	39.5	0.1	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|557694076|ref|YP_008797130.1|	-	1.2e-07	31.5	0.5	1.9e-07	30.8	0.1	1.6	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|557694076|ref|YP_008797130.1|	-	0.0045	16.7	0.4	0.019	14.7	0.3	2.1	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
DHODB_Fe-S_bind	PF10418.4	gi|557694076|ref|YP_008797130.1|	-	4.5	6.8	11.6	0.14	11.6	3.7	1.7	2	0	0	2	2	2	0	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
Ald_Xan_dh_C2	PF02738.13	gi|557694077|ref|YP_008797131.1|	-	1e-76	258.4	0.0	1.5e-76	257.9	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557694077|ref|YP_008797131.1|	-	4.8e-29	100.6	0.0	8.4e-29	99.8	0.0	1.4	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Ald_Xan_dh_C2	PF02738.13	gi|557694078|ref|YP_008797132.1|	-	1.7e-59	201.5	2.5	2.3e-59	201.1	1.7	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Sulf_transp	PF04143.9	gi|557694078|ref|YP_008797132.1|	-	0.051	13.6	0.8	0.14	12.2	0.5	1.7	1	0	0	1	1	1	0	Sulphur	transport
Lactamase_B_3	PF13483.1	gi|557694079|ref|YP_008797133.1|	-	1.3e-19	70.5	0.0	1.8e-19	70.0	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|557694079|ref|YP_008797133.1|	-	7.8e-17	61.4	0.0	9.9e-17	61.1	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|557694079|ref|YP_008797133.1|	-	6.6e-05	22.6	1.9	0.00016	21.4	1.3	1.8	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
DUF3237	PF11578.3	gi|557694080|ref|YP_008797134.1|	-	4.9e-07	29.1	0.1	1.4e-05	24.4	0.0	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3237)
ABC_tran	PF00005.22	gi|557694082|ref|YP_008797136.1|	-	3.7e-26	92.0	0.0	6.4e-26	91.2	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694082|ref|YP_008797136.1|	-	8.5e-11	42.3	3.7	1.1e-08	35.4	1.1	3.0	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|557694082|ref|YP_008797136.1|	-	0.00026	21.0	0.1	0.00083	19.3	0.1	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_33	PF13671.1	gi|557694082|ref|YP_008797136.1|	-	0.00045	20.1	0.2	0.0023	17.8	0.2	1.9	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|557694082|ref|YP_008797136.1|	-	0.00054	20.1	0.1	0.0026	17.9	0.0	2.2	2	1	1	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|557694082|ref|YP_008797136.1|	-	0.0027	17.8	0.0	0.0061	16.6	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557694082|ref|YP_008797136.1|	-	0.003	17.0	0.0	0.0055	16.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.1	gi|557694082|ref|YP_008797136.1|	-	0.0049	16.5	0.0	0.011	15.4	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_17	PF13207.1	gi|557694082|ref|YP_008797136.1|	-	0.0079	17.0	0.3	0.029	15.1	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|557694082|ref|YP_008797136.1|	-	0.0085	16.4	1.0	0.034	14.4	0.7	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|557694082|ref|YP_008797136.1|	-	0.012	14.6	0.0	0.69	8.8	0.0	2.1	1	1	1	2	2	2	0	AAA	ATPase	domain
DUF258	PF03193.11	gi|557694082|ref|YP_008797136.1|	-	0.013	14.6	0.0	0.023	13.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|557694082|ref|YP_008797136.1|	-	0.014	14.8	0.0	0.032	13.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|557694082|ref|YP_008797136.1|	-	0.015	14.3	0.2	1.5	7.8	0.1	2.2	2	0	0	2	2	2	0	Zeta	toxin
Arch_ATPase	PF01637.13	gi|557694082|ref|YP_008797136.1|	-	0.016	14.9	0.0	0.026	14.2	0.0	1.5	1	1	0	1	1	1	0	Archaeal	ATPase
AAA_10	PF12846.2	gi|557694082|ref|YP_008797136.1|	-	0.027	13.9	0.2	0.056	12.8	0.2	1.5	1	0	0	1	1	1	0	AAA-like	domain
AAA_18	PF13238.1	gi|557694082|ref|YP_008797136.1|	-	0.028	14.7	0.1	0.06	13.6	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|557694082|ref|YP_008797136.1|	-	0.029	14.0	0.0	0.071	12.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NACHT	PF05729.7	gi|557694082|ref|YP_008797136.1|	-	0.046	13.3	0.0	0.081	12.5	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_28	PF13521.1	gi|557694082|ref|YP_008797136.1|	-	0.048	13.6	0.0	0.08	12.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
SMC_N	PF02463.14	gi|557694082|ref|YP_008797136.1|	-	0.048	12.8	0.1	5.8	6.0	0.0	2.2	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
TOBE	PF03459.12	gi|557694082|ref|YP_008797136.1|	-	0.052	13.6	0.1	0.17	11.9	0.0	2.0	2	0	0	2	2	2	0	TOBE	domain
UPF0079	PF02367.12	gi|557694082|ref|YP_008797136.1|	-	0.061	12.9	0.0	0.14	11.7	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_30	PF13604.1	gi|557694082|ref|YP_008797136.1|	-	0.097	12.2	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|557694082|ref|YP_008797136.1|	-	0.1	12.7	0.0	0.24	11.5	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
DUF3583	PF12126.3	gi|557694082|ref|YP_008797136.1|	-	0.16	10.9	0.5	0.39	9.7	0.4	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3583)
YrhC	PF14143.1	gi|557694083|ref|YP_008797137.1|	-	0.0066	16.3	2.4	0.012	15.5	1.7	1.4	1	0	0	1	1	1	1	YrhC-like	protein
Neurensin	PF14927.1	gi|557694083|ref|YP_008797137.1|	-	0.032	13.6	0.4	0.061	12.7	0.0	1.6	1	1	1	2	2	2	0	Neurensin
CybS	PF05328.7	gi|557694083|ref|YP_008797137.1|	-	0.058	13.0	1.4	0.067	12.8	1.0	1.1	1	0	0	1	1	1	0	CybS
DUF3938	PF13074.1	gi|557694083|ref|YP_008797137.1|	-	0.11	12.3	0.7	0.14	12.0	0.4	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3938)
Tetraspannin	PF00335.15	gi|557694083|ref|YP_008797137.1|	-	0.44	9.7	2.7	0.43	9.8	1.5	1.3	1	1	0	1	1	1	0	Tetraspanin	family
DUF1129	PF06570.6	gi|557694083|ref|YP_008797137.1|	-	0.56	9.4	3.8	0.52	9.5	2.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF3040	PF11239.3	gi|557694083|ref|YP_008797137.1|	-	0.6	10.1	5.6	2.1	8.4	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
DUF4199	PF13858.1	gi|557694083|ref|YP_008797137.1|	-	2.1	8.2	8.2	2.2	8.1	5.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4199)
DUF2371	PF10177.4	gi|557694083|ref|YP_008797137.1|	-	3.3	7.6	5.5	0.5	10.2	0.3	2.0	1	1	1	2	2	2	0	Uncharacterised	conserved	protein	(DUF2371)
SdpI	PF13630.1	gi|557694083|ref|YP_008797137.1|	-	6	6.6	8.9	3.3	7.4	4.3	1.8	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
ABC_tran	PF00005.22	gi|557694084|ref|YP_008797138.1|	-	2.2e-34	118.6	0.0	3.8e-34	117.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694084|ref|YP_008797138.1|	-	3.1e-08	33.9	0.0	0.00047	20.2	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
TOBE_2	PF08402.5	gi|557694084|ref|YP_008797138.1|	-	6e-06	26.1	0.0	1.4e-05	24.9	0.0	1.7	1	0	0	1	1	1	1	TOBE	domain
AAA_23	PF13476.1	gi|557694084|ref|YP_008797138.1|	-	0.00021	21.7	0.0	0.00046	20.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
TOBE	PF03459.12	gi|557694084|ref|YP_008797138.1|	-	0.00054	20.0	1.6	0.033	14.2	0.0	3.4	4	0	0	4	4	3	1	TOBE	domain
AAA_22	PF13401.1	gi|557694084|ref|YP_008797138.1|	-	0.00083	19.5	1.0	0.0069	16.5	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
UPF0079	PF02367.12	gi|557694084|ref|YP_008797138.1|	-	0.00092	18.8	0.1	0.0021	17.6	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_29	PF13555.1	gi|557694084|ref|YP_008797138.1|	-	0.001	18.5	0.0	0.0025	17.3	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|557694084|ref|YP_008797138.1|	-	0.0047	16.0	0.0	1.3	8.0	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|557694084|ref|YP_008797138.1|	-	0.0054	16.7	0.3	0.017	15.1	0.2	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|557694084|ref|YP_008797138.1|	-	0.0067	15.6	0.0	0.022	13.9	0.0	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_30	PF13604.1	gi|557694084|ref|YP_008797138.1|	-	0.0099	15.4	0.0	0.02	14.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|557694084|ref|YP_008797138.1|	-	0.014	14.8	0.0	0.048	13.0	0.0	1.8	2	0	0	2	2	2	0	AAA-like	domain
AAA_19	PF13245.1	gi|557694084|ref|YP_008797138.1|	-	0.017	14.8	0.1	0.046	13.4	0.1	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
PduV-EutP	PF10662.4	gi|557694084|ref|YP_008797138.1|	-	0.023	14.1	0.0	0.046	13.2	0.0	1.4	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
Mg_chelatase	PF01078.16	gi|557694084|ref|YP_008797138.1|	-	0.024	13.7	0.0	0.06	12.4	0.0	1.7	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AsiA	PF09010.5	gi|557694084|ref|YP_008797138.1|	-	0.028	14.2	0.4	2.6	7.9	0.1	2.4	2	0	0	2	2	2	0	Anti-Sigma	Factor	A
DLIC	PF05783.6	gi|557694084|ref|YP_008797138.1|	-	0.033	12.8	0.0	0.054	12.1	0.0	1.2	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
AAA_33	PF13671.1	gi|557694084|ref|YP_008797138.1|	-	0.039	13.8	0.2	0.22	11.4	0.2	2.1	1	1	0	1	1	1	0	AAA	domain
SMC_N	PF02463.14	gi|557694084|ref|YP_008797138.1|	-	0.04	13.1	0.0	0.6	9.2	0.0	2.2	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
SbcCD_C	PF13558.1	gi|557694084|ref|YP_008797138.1|	-	0.049	13.5	0.1	0.22	11.4	0.1	2.0	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_25	PF13481.1	gi|557694084|ref|YP_008797138.1|	-	0.054	12.8	0.1	0.19	11.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|557694084|ref|YP_008797138.1|	-	0.06	13.5	0.1	0.35	11.0	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|557694084|ref|YP_008797138.1|	-	0.061	12.1	0.3	0.2	10.4	0.0	1.9	2	1	0	2	2	2	0	NB-ARC	domain
IMS_C	PF11799.3	gi|557694084|ref|YP_008797138.1|	-	0.07	13.0	0.5	0.57	10.1	0.0	2.0	1	1	0	2	2	2	0	impB/mucB/samB	family	C-terminal	domain
Arch_ATPase	PF01637.13	gi|557694084|ref|YP_008797138.1|	-	0.081	12.6	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	Archaeal	ATPase
NACHT	PF05729.7	gi|557694084|ref|YP_008797138.1|	-	0.095	12.3	0.2	0.2	11.3	0.1	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_14	PF13173.1	gi|557694084|ref|YP_008797138.1|	-	0.1	12.5	0.0	0.69	9.8	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|557694084|ref|YP_008797138.1|	-	0.11	13.3	1.0	0.44	11.3	0.7	2.2	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|557694084|ref|YP_008797138.1|	-	0.13	11.6	0.0	0.27	10.6	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
BPD_transp_1	PF00528.17	gi|557694085|ref|YP_008797139.1|	-	6.9e-21	74.5	18.9	6.9e-21	74.5	13.1	2.0	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF3981	PF13139.1	gi|557694085|ref|YP_008797139.1|	-	0.57	10.2	4.5	8.5	6.4	0.0	2.8	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF3981)
BPD_transp_1	PF00528.17	gi|557694086|ref|YP_008797140.1|	-	4.7e-12	45.7	20.2	4.7e-12	45.7	14.0	2.1	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_1	PF01547.20	gi|557694087|ref|YP_008797141.1|	-	1.8e-14	54.2	0.9	3.2e-14	53.3	0.0	1.9	2	1	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|557694087|ref|YP_008797141.1|	-	4.1e-14	52.9	0.0	6.9e-14	52.2	0.0	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
Aldedh	PF00171.17	gi|557694088|ref|YP_008797142.1|	-	2e-169	563.8	0.1	2.3e-169	563.6	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|557694088|ref|YP_008797142.1|	-	3.9e-05	22.5	0.0	8.1e-05	21.5	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
M157	PF11624.3	gi|557694088|ref|YP_008797142.1|	-	0.073	12.1	0.0	0.11	11.5	0.0	1.1	1	0	0	1	1	1	0	MHC	class	I-like	protein	M157
FAA_hydrolase	PF01557.13	gi|557694089|ref|YP_008797143.1|	-	5.4e-34	117.5	0.0	6.8e-34	117.2	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
AlkA_N	PF06029.6	gi|557694089|ref|YP_008797143.1|	-	0.14	12.2	0.0	5	7.2	0.0	2.2	2	0	0	2	2	2	0	AlkA	N-terminal	domain
Epimerase	PF01370.16	gi|557694090|ref|YP_008797144.1|	-	2.6e-34	118.7	0.0	3.2e-34	118.3	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|557694090|ref|YP_008797144.1|	-	1e-16	60.5	0.0	1.3e-16	60.1	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|557694090|ref|YP_008797144.1|	-	2e-13	49.8	0.0	2.5e-13	49.5	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|557694090|ref|YP_008797144.1|	-	2.7e-12	46.2	0.0	1e-11	44.2	0.0	1.8	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|557694090|ref|YP_008797144.1|	-	2.5e-08	33.1	0.0	0.00052	19.0	0.0	2.2	2	0	0	2	2	2	2	Male	sterility	protein
adh_short	PF00106.20	gi|557694090|ref|YP_008797144.1|	-	4.3e-05	23.4	0.0	8.8e-05	22.4	0.0	1.5	1	0	0	1	1	1	1	short	chain	dehydrogenase
NAD_binding_10	PF13460.1	gi|557694090|ref|YP_008797144.1|	-	6.5e-05	23.0	0.0	0.0001	22.3	0.0	1.5	1	1	0	1	1	1	1	NADH(P)-binding
NmrA	PF05368.8	gi|557694090|ref|YP_008797144.1|	-	0.0057	15.9	1.4	0.028	13.6	0.4	2.3	2	1	0	2	2	2	1	NmrA-like	family
Saccharop_dh	PF03435.13	gi|557694090|ref|YP_008797144.1|	-	0.018	14.0	0.0	0.03	13.2	0.0	1.3	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
KR	PF08659.5	gi|557694090|ref|YP_008797144.1|	-	0.076	12.6	0.0	0.14	11.8	0.0	1.5	1	0	0	1	1	1	0	KR	domain
HpcH_HpaI	PF03328.9	gi|557694091|ref|YP_008797145.1|	-	1.1e-42	145.4	1.2	1.2e-42	145.2	0.8	1.0	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
S4	PF01479.20	gi|557694091|ref|YP_008797145.1|	-	0.072	12.5	0.0	0.18	11.2	0.0	1.6	1	0	0	1	1	1	0	S4	domain
Response_reg	PF00072.19	gi|557694091|ref|YP_008797145.1|	-	0.093	12.7	0.4	0.35	10.8	0.0	2.1	3	1	0	3	3	3	0	Response	regulator	receiver	domain
PAC2	PF09754.4	gi|557694092|ref|YP_008797146.1|	-	5.8e-26	91.7	0.0	7.1e-26	91.4	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
DUF350	PF03994.9	gi|557694093|ref|YP_008797147.1|	-	3.4e-09	36.2	0.8	1e-08	34.7	0.6	1.9	1	1	0	1	1	1	1	Domain	of	Unknown	Function	(DUF350)
DUF2232	PF09991.4	gi|557694093|ref|YP_008797147.1|	-	0.0082	15.1	1.2	0.0091	15.0	0.8	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2232)
MVIN	PF03023.9	gi|557694093|ref|YP_008797147.1|	-	0.013	13.9	1.7	0.014	13.8	1.2	1.0	1	0	0	1	1	1	0	MviN-like	protein
DUF4029	PF13221.1	gi|557694093|ref|YP_008797147.1|	-	0.029	14.7	1.4	0.036	14.4	1.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4029)
Brr6_like_C_C	PF10104.4	gi|557694093|ref|YP_008797147.1|	-	0.036	13.5	1.1	0.042	13.3	0.3	1.5	1	1	0	1	1	1	0	Di-sulfide	bridge	nucleocytoplasmic	transport	domain
ABC_cobalt	PF09819.4	gi|557694093|ref|YP_008797147.1|	-	0.045	13.7	2.0	0.048	13.6	1.4	1.0	1	0	0	1	1	1	0	ABC-type	cobalt	transport	system,	permease	component
SieB	PF14163.1	gi|557694093|ref|YP_008797147.1|	-	0.12	11.9	3.3	0.29	10.7	1.8	1.7	1	1	0	1	1	1	0	Superinfection	exclusion	protein	B
DUF3953	PF13129.1	gi|557694093|ref|YP_008797147.1|	-	3.2	7.4	7.0	0.65	9.6	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3953)
STT3	PF02516.9	gi|557694095|ref|YP_008797149.1|	-	2.4e-48	165.3	25.5	3.3e-48	164.8	17.7	1.1	1	0	0	1	1	1	1	Oligosaccharyl	transferase	STT3	subunit
PQQ_3	PF13570.1	gi|557694096|ref|YP_008797150.1|	-	0.11	12.8	11.6	0.83	10.0	0.7	4.3	4	0	0	4	4	4	0	PQQ-like	domain
Rifin_STEVOR	PF02009.11	gi|557694096|ref|YP_008797150.1|	-	1.8	8.1	11.0	3	7.4	7.6	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
TFIIA	PF03153.8	gi|557694096|ref|YP_008797150.1|	-	7.7	6.2	10.2	9.8	5.9	7.0	1.1	1	0	0	1	1	1	0	Transcription	factor	IIA,	alpha/beta	subunit
Ribonuc_L-PSP	PF01042.16	gi|557694097|ref|YP_008797151.1|	-	3.1e-37	126.9	0.0	3.5e-37	126.8	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
Peptidase_M24	PF00557.19	gi|557694098|ref|YP_008797152.1|	-	2.5e-40	138.2	0.0	3.3e-40	137.8	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|557694098|ref|YP_008797152.1|	-	1.4e-18	67.7	0.0	1.1e-17	64.7	0.0	2.1	2	0	0	2	2	2	1	Creatinase/Prolidase	N-terminal	domain
ABC_tran	PF00005.22	gi|557694099|ref|YP_008797153.1|	-	1.1e-30	106.6	0.0	1.7e-30	106.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
TOBE_2	PF08402.5	gi|557694099|ref|YP_008797153.1|	-	1e-09	38.2	0.0	3.1e-09	36.6	0.0	1.9	2	0	0	2	2	2	1	TOBE	domain
AAA_21	PF13304.1	gi|557694099|ref|YP_008797153.1|	-	1.4e-08	35.1	0.0	0.00029	20.9	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694099|ref|YP_008797153.1|	-	9.4e-05	21.7	0.0	0.0013	18.0	0.0	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
TOBE	PF03459.12	gi|557694099|ref|YP_008797153.1|	-	0.00015	21.7	0.0	0.002	18.1	0.0	2.7	2	1	0	2	2	2	1	TOBE	domain
Rad17	PF03215.10	gi|557694099|ref|YP_008797153.1|	-	0.00026	19.8	0.0	0.00033	19.4	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
DUF258	PF03193.11	gi|557694099|ref|YP_008797153.1|	-	0.00045	19.4	0.0	0.00079	18.6	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|557694099|ref|YP_008797153.1|	-	0.002	17.5	0.2	0.0065	15.9	0.1	1.9	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|557694099|ref|YP_008797153.1|	-	0.0073	15.7	0.0	0.011	15.1	0.0	1.3	1	0	0	1	1	1	1	AAA-like	domain
AAA_23	PF13476.1	gi|557694099|ref|YP_008797153.1|	-	0.01	16.1	0.1	0.019	15.3	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|557694099|ref|YP_008797153.1|	-	0.019	15.1	0.0	0.044	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|557694099|ref|YP_008797153.1|	-	0.019	14.8	0.0	0.052	13.4	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|557694099|ref|YP_008797153.1|	-	0.034	14.1	0.1	0.088	12.7	0.0	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
AIG1	PF04548.11	gi|557694099|ref|YP_008797153.1|	-	0.062	12.4	0.0	0.12	11.4	0.0	1.4	1	0	0	1	1	1	0	AIG1	family
SbcCD_C	PF13558.1	gi|557694099|ref|YP_008797153.1|	-	0.068	13.0	0.0	0.43	10.5	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
Arch_ATPase	PF01637.13	gi|557694099|ref|YP_008797153.1|	-	0.078	12.6	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
RNA_helicase	PF00910.17	gi|557694099|ref|YP_008797153.1|	-	0.08	13.1	0.0	0.53	10.4	0.0	2.3	2	0	0	2	2	2	0	RNA	helicase
AAA_28	PF13521.1	gi|557694099|ref|YP_008797153.1|	-	0.088	12.7	0.2	0.31	10.9	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|557694099|ref|YP_008797153.1|	-	0.11	12.3	0.0	0.24	11.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Arr-ms	PF12120.3	gi|557694099|ref|YP_008797153.1|	-	0.13	12.2	0.0	0.8	9.6	0.0	2.3	2	1	0	2	2	2	0	Rifampin	ADP-ribosyl	transferase
BPD_transp_1	PF00528.17	gi|557694100|ref|YP_008797154.1|	-	8.2e-21	74.3	17.5	8.2e-21	74.3	12.1	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|557694101|ref|YP_008797155.1|	-	2.5e-07	30.3	24.8	2.5e-07	30.3	17.2	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_8	PF13416.1	gi|557694102|ref|YP_008797156.1|	-	1.5e-17	64.2	3.4	2.8e-17	63.3	2.3	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|557694102|ref|YP_008797156.1|	-	3.8e-08	33.4	4.0	6.2e-08	32.7	2.7	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
MacB_PCD	PF12704.2	gi|557694102|ref|YP_008797156.1|	-	0.0098	15.5	0.1	0.017	14.7	0.0	1.4	1	0	0	1	1	1	1	MacB-like	periplasmic	core	domain
ETRAMP	PF09716.5	gi|557694102|ref|YP_008797156.1|	-	0.12	12.3	0.2	0.25	11.3	0.1	1.5	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Ala_racemase_N	PF01168.15	gi|557694103|ref|YP_008797157.1|	-	1.1e-31	110.1	0.1	1.4e-31	109.7	0.0	1.1	1	0	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
D-ser_dehydrat	PF14031.1	gi|557694103|ref|YP_008797157.1|	-	2.2e-21	75.8	0.1	5.4e-21	74.5	0.0	1.7	1	0	0	1	1	1	1	Putative	serine	dehydratase	domain
phage_tail_N	PF08400.5	gi|557694103|ref|YP_008797157.1|	-	0.024	14.3	0.0	0.079	12.6	0.0	1.9	1	0	0	1	1	1	0	Prophage	tail	fibre	N-terminal
DUF3834	PF12916.2	gi|557694103|ref|YP_008797157.1|	-	0.026	13.5	0.1	0.038	12.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3834)
CRISPR_Cse2	PF09485.5	gi|557694103|ref|YP_008797157.1|	-	0.04	13.9	0.1	0.38	10.7	0.0	2.3	2	0	0	2	2	2	0	CRISPR-associated	protein	Cse2	(CRISPR_cse2)
Bac_luciferase	PF00296.15	gi|557694104|ref|YP_008797158.1|	-	4.4e-54	183.6	0.0	5.4e-54	183.3	0.0	1.0	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
EamA	PF00892.15	gi|557694105|ref|YP_008797159.1|	-	2.5e-25	88.9	28.3	7.7e-13	48.5	5.7	2.5	2	1	1	3	3	3	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|557694105|ref|YP_008797159.1|	-	2.3e-07	30.9	27.0	3.4e-05	24.0	7.6	2.9	1	1	2	3	3	3	2	Multidrug	resistance	efflux	transporter
Nuc_sug_transp	PF04142.10	gi|557694105|ref|YP_008797159.1|	-	9.9e-07	28.1	2.1	0.0027	16.8	0.4	2.4	2	0	0	2	2	2	2	Nucleotide-sugar	transporter
TPT	PF03151.11	gi|557694105|ref|YP_008797159.1|	-	0.079	12.6	18.0	0.17	11.5	3.1	2.9	2	2	0	2	2	2	0	Triose-phosphate	Transporter	family
Bac_luciferase	PF00296.15	gi|557694106|ref|YP_008797160.1|	-	3.9e-60	203.5	0.0	4.8e-60	203.2	0.0	1.0	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Cpn60_TCP1	PF00118.19	gi|557694107|ref|YP_008797161.1|	-	1.9e-107	359.9	0.0	2.2e-107	359.7	0.0	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Enolase_C	PF00113.17	gi|557694108|ref|YP_008797162.1|	-	1.1e-89	300.4	0.0	1.3e-89	300.0	0.0	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|557694108|ref|YP_008797162.1|	-	2.6e-47	160.0	0.0	3.9e-47	159.4	0.0	1.3	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE_C	PF13378.1	gi|557694108|ref|YP_008797162.1|	-	0.0016	18.3	0.0	0.0047	16.8	0.0	1.8	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MAAL_C	PF07476.6	gi|557694108|ref|YP_008797162.1|	-	0.0024	16.8	0.2	0.01	14.8	0.0	2.0	2	0	0	2	2	2	1	Methylaspartate	ammonia-lyase	C-terminus
APH	PF01636.18	gi|557694109|ref|YP_008797163.1|	-	2.9e-16	59.9	0.0	4.5e-16	59.2	0.0	1.4	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
Choline_kinase	PF01633.15	gi|557694109|ref|YP_008797163.1|	-	0.0012	18.5	0.6	0.0079	15.7	0.0	2.4	1	1	1	2	2	2	1	Choline/ethanolamine	kinase
APH_6_hur	PF04655.9	gi|557694109|ref|YP_008797163.1|	-	0.0015	17.7	0.0	0.0079	15.3	0.0	2.2	1	1	0	1	1	1	1	Aminoglycoside/hydroxyurea	antibiotic	resistance	kinase
RIO1	PF01163.17	gi|557694109|ref|YP_008797163.1|	-	0.04	13.2	0.0	0.08	12.2	0.0	1.4	1	0	0	1	1	1	0	RIO1	family
EcKinase	PF02958.15	gi|557694109|ref|YP_008797163.1|	-	0.062	12.4	0.0	0.093	11.8	0.0	1.3	1	0	0	1	1	1	0	Ecdysteroid	kinase
Phage_gp53	PF11246.3	gi|557694109|ref|YP_008797163.1|	-	0.082	12.3	0.1	0.13	11.7	0.1	1.3	1	0	0	1	1	1	0	Base	plate	wedge	protein	53
GFO_IDH_MocA	PF01408.17	gi|557694110|ref|YP_008797164.1|	-	2.7e-31	108.5	0.2	5e-31	107.7	0.1	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|557694110|ref|YP_008797164.1|	-	0.00039	20.1	0.0	0.0008	19.1	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
IlvN	PF07991.7	gi|557694110|ref|YP_008797164.1|	-	0.028	13.7	0.0	0.056	12.8	0.0	1.4	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
DUF4432	PF14486.1	gi|557694111|ref|YP_008797165.1|	-	1.3e-18	66.5	0.0	4.4e-18	64.8	0.0	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4432)
Aldose_epim	PF01263.15	gi|557694111|ref|YP_008797165.1|	-	0.11	11.6	0.0	0.17	10.9	0.0	1.3	1	0	0	1	1	1	0	Aldose	1-epimerase
Creatininase	PF02633.9	gi|557694112|ref|YP_008797166.1|	-	2.3e-62	210.2	0.0	2.6e-62	209.9	0.0	1.0	1	0	0	1	1	1	1	Creatinine	amidohydrolase
Peptidase_M19	PF01244.16	gi|557694113|ref|YP_008797167.1|	-	2e-84	283.2	0.0	2.5e-84	282.9	0.0	1.0	1	0	0	1	1	1	1	Membrane	dipeptidase	(Peptidase	family	M19)
Amidohydro_2	PF04909.9	gi|557694113|ref|YP_008797167.1|	-	0.00011	21.8	0.0	0.0002	21.0	0.0	1.5	1	1	0	1	1	1	1	Amidohydrolase
SBP_bac_1	PF01547.20	gi|557694114|ref|YP_008797168.1|	-	6.5e-17	62.2	6.5	1.2e-16	61.3	4.5	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|557694114|ref|YP_008797168.1|	-	2.5e-15	56.9	2.3	2.5e-15	56.9	1.6	1.5	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
CytB6-F_Fe-S	PF08802.5	gi|557694114|ref|YP_008797168.1|	-	0.064	13.2	0.2	0.14	12.1	0.1	1.6	1	0	0	1	1	1	0	Cytochrome	B6-F	complex	Fe-S	subunit
BPD_transp_1	PF00528.17	gi|557694115|ref|YP_008797169.1|	-	2.3e-07	30.5	32.6	2.3e-07	30.5	22.6	2.2	2	1	1	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
SKG6	PF08693.5	gi|557694115|ref|YP_008797169.1|	-	2.4	7.5	9.6	1.4	8.3	0.6	2.7	2	0	0	2	2	2	0	Transmembrane	alpha-helix	domain
BPD_transp_1	PF00528.17	gi|557694116|ref|YP_008797170.1|	-	5.9e-14	51.9	21.7	5.9e-14	51.9	15.0	2.6	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|557694117|ref|YP_008797171.1|	-	1.9e-32	112.4	0.0	3.1e-32	111.7	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
TOBE_2	PF08402.5	gi|557694117|ref|YP_008797171.1|	-	2.8e-10	40.0	0.0	6.1e-10	38.9	0.0	1.6	1	0	0	1	1	1	1	TOBE	domain
TOBE	PF03459.12	gi|557694117|ref|YP_008797171.1|	-	9.2e-06	25.6	0.0	3.8e-05	23.6	0.0	2.1	2	0	0	2	2	2	1	TOBE	domain
AAA_21	PF13304.1	gi|557694117|ref|YP_008797171.1|	-	3.9e-05	23.7	0.0	0.048	13.6	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694117|ref|YP_008797171.1|	-	0.0023	17.2	0.0	0.0048	16.1	0.0	1.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|557694117|ref|YP_008797171.1|	-	0.0024	18.6	0.1	0.0058	17.4	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|557694117|ref|YP_008797171.1|	-	0.0032	17.6	0.0	0.0072	16.5	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|557694117|ref|YP_008797171.1|	-	0.0036	17.4	0.0	0.0094	16.0	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557694117|ref|YP_008797171.1|	-	0.0038	16.9	0.1	0.0089	15.7	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_18	PF13238.1	gi|557694117|ref|YP_008797171.1|	-	0.01	16.1	0.1	0.031	14.5	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|557694117|ref|YP_008797171.1|	-	0.011	16.0	0.0	0.021	15.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|557694117|ref|YP_008797171.1|	-	0.013	15.4	0.0	0.026	14.3	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|557694117|ref|YP_008797171.1|	-	0.013	14.9	0.0	0.024	14.1	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
RuvB_N	PF05496.7	gi|557694117|ref|YP_008797171.1|	-	0.016	14.2	0.3	0.15	11.0	0.1	2.1	1	1	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_28	PF13521.1	gi|557694117|ref|YP_008797171.1|	-	0.018	15.0	0.0	0.07	13.0	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
UPF0079	PF02367.12	gi|557694117|ref|YP_008797171.1|	-	0.019	14.5	0.4	0.04	13.5	0.0	1.7	2	0	0	2	2	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Zeta_toxin	PF06414.7	gi|557694117|ref|YP_008797171.1|	-	0.026	13.6	0.0	0.078	12.0	0.0	1.8	2	0	0	2	2	2	0	Zeta	toxin
AAA_25	PF13481.1	gi|557694117|ref|YP_008797171.1|	-	0.032	13.6	0.0	0.06	12.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|557694117|ref|YP_008797171.1|	-	0.042	13.3	0.0	0.099	12.1	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.1	gi|557694117|ref|YP_008797171.1|	-	0.053	13.0	0.0	0.1	12.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|557694117|ref|YP_008797171.1|	-	0.062	12.1	0.0	0.1	11.4	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
DUF258	PF03193.11	gi|557694117|ref|YP_008797171.1|	-	0.064	12.4	0.0	0.11	11.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_10	PF12846.2	gi|557694117|ref|YP_008797171.1|	-	0.071	12.5	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	AAA-like	domain
Rad17	PF03215.10	gi|557694117|ref|YP_008797171.1|	-	0.081	11.5	0.0	0.11	11.1	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
ATP-synt_ab	PF00006.20	gi|557694117|ref|YP_008797171.1|	-	0.082	12.3	0.0	0.11	11.9	0.0	1.4	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_16	PF13191.1	gi|557694117|ref|YP_008797171.1|	-	0.085	12.8	0.0	0.14	12.1	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
MoeA_C	PF03454.10	gi|557694117|ref|YP_008797171.1|	-	0.091	12.7	0.1	0.18	11.7	0.1	1.5	1	0	0	1	1	1	0	MoeA	C-terminal	region	(domain	IV)
NACHT	PF05729.7	gi|557694117|ref|YP_008797171.1|	-	0.099	12.2	0.0	0.55	9.8	0.0	2.1	2	0	0	2	2	2	0	NACHT	domain
ABC_tran	PF00005.22	gi|557694118|ref|YP_008797172.1|	-	6.7e-29	100.9	0.0	1.1e-28	100.2	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
TOBE	PF03459.12	gi|557694118|ref|YP_008797172.1|	-	3.7e-07	30.1	0.0	6.6e-06	26.1	0.0	2.9	3	0	0	3	3	3	1	TOBE	domain
TOBE_2	PF08402.5	gi|557694118|ref|YP_008797172.1|	-	9.4e-07	28.7	0.0	2.8e-06	27.2	0.0	1.8	2	0	0	2	2	2	1	TOBE	domain
AAA_15	PF13175.1	gi|557694118|ref|YP_008797172.1|	-	9.6e-06	24.8	0.0	0.00021	20.4	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_21	PF13304.1	gi|557694118|ref|YP_008797172.1|	-	6.5e-05	23.0	0.0	0.022	14.7	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|557694118|ref|YP_008797172.1|	-	0.011	14.9	0.0	0.021	14.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|557694118|ref|YP_008797172.1|	-	0.012	15.6	1.8	0.11	12.5	1.2	2.2	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|557694118|ref|YP_008797172.1|	-	0.015	13.9	0.0	0.02	13.5	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_16	PF13191.1	gi|557694118|ref|YP_008797172.1|	-	0.019	14.9	0.0	0.038	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.24	gi|557694118|ref|YP_008797172.1|	-	0.034	14.3	0.7	0.09	12.9	0.5	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|557694118|ref|YP_008797172.1|	-	0.064	13.1	0.0	0.71	9.7	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|557694118|ref|YP_008797172.1|	-	0.07	13.4	0.2	0.19	12.0	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|557694118|ref|YP_008797172.1|	-	0.13	11.6	0.3	0.48	9.7	0.1	1.9	1	1	1	2	2	2	0	AAA	domain
GFO_IDH_MocA	PF01408.17	gi|557694119|ref|YP_008797173.1|	-	9.7e-26	90.6	1.2	1.6e-25	89.9	0.9	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Semialdhyde_dh	PF01118.19	gi|557694119|ref|YP_008797173.1|	-	1.8e-07	31.4	1.1	3e-07	30.7	0.1	1.8	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA_C	PF02894.12	gi|557694119|ref|YP_008797173.1|	-	4.2e-07	29.7	0.0	1e-06	28.5	0.0	1.7	1	1	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
NAD_binding_3	PF03447.11	gi|557694119|ref|YP_008797173.1|	-	1.8e-06	28.3	0.5	3.2e-06	27.5	0.3	1.5	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|557694119|ref|YP_008797173.1|	-	0.00022	21.3	0.3	0.00038	20.5	0.2	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Response_reg	PF00072.19	gi|557694119|ref|YP_008797173.1|	-	0.004	17.1	0.2	0.75	9.8	0.0	2.5	1	1	1	2	2	2	1	Response	regulator	receiver	domain
MTS	PF05175.9	gi|557694119|ref|YP_008797173.1|	-	0.0082	15.5	0.1	0.014	14.7	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
NAD_binding_7	PF13241.1	gi|557694119|ref|YP_008797173.1|	-	0.011	15.9	0.4	0.027	14.7	0.3	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
G6PD_N	PF00479.17	gi|557694119|ref|YP_008797173.1|	-	0.012	15.8	0.2	0.035	14.3	0.0	1.8	2	0	0	2	2	2	0	Glucose-6-phosphate	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|557694119|ref|YP_008797173.1|	-	0.024	15.0	1.0	0.067	13.6	0.2	2.1	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
OCD_Mu_crystall	PF02423.10	gi|557694119|ref|YP_008797173.1|	-	0.026	13.2	0.6	0.048	12.4	0.4	1.5	1	1	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
CMAS	PF02353.15	gi|557694119|ref|YP_008797173.1|	-	0.1	11.6	0.0	0.15	11.1	0.0	1.3	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_31	PF13847.1	gi|557694119|ref|YP_008797173.1|	-	0.13	11.8	0.1	0.22	11.0	0.1	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
GFO_IDH_MocA	PF01408.17	gi|557694120|ref|YP_008797174.1|	-	1.6e-29	102.8	0.0	2.4e-29	102.2	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|557694120|ref|YP_008797174.1|	-	7.4e-13	48.3	0.0	1.3e-12	47.5	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
NAD_binding_3	PF03447.11	gi|557694120|ref|YP_008797174.1|	-	4.4e-09	36.7	0.0	6.2e-09	36.2	0.0	1.2	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|557694120|ref|YP_008797174.1|	-	0.0016	18.3	0.0	0.0027	17.5	0.0	1.4	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Semialdhyde_dh	PF01118.19	gi|557694120|ref|YP_008797174.1|	-	0.0026	18.0	0.0	0.0045	17.2	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|557694120|ref|YP_008797174.1|	-	0.0074	16.6	0.0	0.013	15.8	0.0	1.4	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
OCD_Mu_crystall	PF02423.10	gi|557694120|ref|YP_008797174.1|	-	0.024	13.4	0.0	0.036	12.8	0.0	1.2	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
RdRP	PF05183.7	gi|557694120|ref|YP_008797174.1|	-	0.14	10.8	0.0	0.19	10.3	0.0	1.1	1	0	0	1	1	1	0	RNA	dependent	RNA	polymerase
GFO_IDH_MocA	PF01408.17	gi|557694121|ref|YP_008797175.1|	-	7.6e-24	84.5	0.2	1.1e-23	83.9	0.2	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|557694121|ref|YP_008797175.1|	-	7.3e-10	38.6	0.1	1.6e-09	37.5	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
NAD_binding_3	PF03447.11	gi|557694121|ref|YP_008797175.1|	-	0.00094	19.5	0.3	0.0017	18.7	0.2	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|557694121|ref|YP_008797175.1|	-	0.062	13.2	0.1	0.11	12.4	0.1	1.4	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
Methyltransf_6	PF03737.10	gi|557694122|ref|YP_008797176.1|	-	5.8e-25	87.9	0.2	7.5e-25	87.5	0.1	1.1	1	0	0	1	1	1	1	Demethylmenaquinone	methyltransferase
OCD_Mu_crystall	PF02423.10	gi|557694123|ref|YP_008797177.1|	-	3.3e-87	292.1	5.3	3.8e-87	291.9	3.7	1.0	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|557694123|ref|YP_008797177.1|	-	0.00012	22.2	0.2	0.00022	21.3	0.1	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
OST3_OST6	PF04756.8	gi|557694124|ref|YP_008797178.1|	-	0.0014	18.2	2.2	0.0017	17.9	1.5	1.1	1	0	0	1	1	1	1	OST3	/	OST6	family
DUF3754	PF12576.3	gi|557694124|ref|YP_008797178.1|	-	0.16	11.6	1.1	0.23	11.1	0.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3754)
DUF998	PF06197.8	gi|557694124|ref|YP_008797178.1|	-	1.9	7.7	14.0	7.7	5.7	9.7	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF998)
Abhydrolase_9_N	PF15420.1	gi|557694124|ref|YP_008797178.1|	-	2.4	7.8	8.4	3	7.5	1.9	2.0	2	0	0	2	2	2	0	Alpha/beta-hydrolase	family	N-terminus
MARVEL	PF01284.18	gi|557694124|ref|YP_008797178.1|	-	3.1	7.5	11.9	7.8	6.3	7.0	2.0	1	1	1	2	2	2	0	Membrane-associating	domain
DUF4405	PF14358.1	gi|557694124|ref|YP_008797178.1|	-	8.8	6.5	10.7	8.3	6.6	3.6	2.8	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4405)
RecA	PF00154.16	gi|557694125|ref|YP_008797179.1|	-	9.8e-07	28.1	0.0	1.1e-06	27.9	0.0	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_25	PF13481.1	gi|557694125|ref|YP_008797179.1|	-	1.6e-06	27.6	0.0	2.4e-06	27.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Rad51	PF08423.6	gi|557694125|ref|YP_008797179.1|	-	1.6e-05	23.9	0.0	2.5e-05	23.2	0.0	1.2	1	0	0	1	1	1	1	Rad51
Arch_ATPase	PF01637.13	gi|557694125|ref|YP_008797179.1|	-	2e-05	24.3	0.0	5.3e-05	23.0	0.0	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|557694125|ref|YP_008797179.1|	-	0.00036	20.5	0.1	0.001	19.0	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557694125|ref|YP_008797179.1|	-	0.0088	16.1	0.0	0.018	15.1	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|557694125|ref|YP_008797179.1|	-	0.036	13.5	0.0	0.05	13.0	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_10	PF12846.2	gi|557694125|ref|YP_008797179.1|	-	0.054	12.9	0.0	0.089	12.2	0.0	1.3	1	1	0	1	1	1	0	AAA-like	domain
DAP3	PF10236.4	gi|557694125|ref|YP_008797179.1|	-	0.068	12.0	0.0	0.093	11.6	0.0	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
ASCH	PF04266.9	gi|557694126|ref|YP_008797180.1|	-	8.1e-10	39.0	0.0	9.5e-10	38.8	0.0	1.1	1	0	0	1	1	1	1	ASCH	domain
TPR_10	PF13374.1	gi|557694126|ref|YP_008797180.1|	-	0.02	14.7	0.0	1.5	8.8	0.2	2.2	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TusA	PF01206.12	gi|557694127|ref|YP_008797181.1|	-	5.6e-22	77.1	0.0	6.4e-22	76.9	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|557694127|ref|YP_008797181.1|	-	0.072	12.6	0.0	0.17	11.5	0.0	1.5	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2249)
DrsE_2	PF13686.1	gi|557694128|ref|YP_008797182.1|	-	2.6e-28	98.6	0.5	7.3e-28	97.2	0.3	1.6	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|557694128|ref|YP_008797182.1|	-	4.2e-08	33.2	0.0	8.1e-08	32.3	0.0	1.4	1	1	0	1	1	1	1	DsrE/DsrF-like	family
EPSP_synthase	PF00275.15	gi|557694128|ref|YP_008797182.1|	-	0.06	11.7	0.0	0.079	11.3	0.0	1.1	1	0	0	1	1	1	0	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
Apc4_WD40	PF12894.2	gi|557694128|ref|YP_008797182.1|	-	0.069	12.6	0.0	0.15	11.6	0.0	1.6	1	0	0	1	1	1	0	Anaphase-promoting	complex	subunit	4	WD40	domain
Polyketide_cyc2	PF10604.4	gi|557694130|ref|YP_008797184.1|	-	4.2e-08	33.4	0.0	5.6e-08	33.0	0.0	1.2	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Peptidase_M50	PF02163.17	gi|557694130|ref|YP_008797184.1|	-	0.00024	20.1	4.0	0.0019	17.2	2.7	2.2	1	1	0	1	1	1	1	Peptidase	family	M50
Polyketide_cyc	PF03364.15	gi|557694130|ref|YP_008797184.1|	-	0.0017	18.3	0.0	0.0024	17.8	0.0	1.2	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Peptidase_M50B	PF13398.1	gi|557694130|ref|YP_008797184.1|	-	1	8.7	9.2	8.7	5.6	6.4	2.1	1	1	0	1	1	1	0	Peptidase	M50B-like
Cas_DxTHG	PF09455.5	gi|557694131|ref|YP_008797185.1|	-	1.8e-14	53.7	1.8	2.1e-12	46.9	0.0	2.7	2	1	0	2	2	2	2	CRISPR-associated	(Cas)	DxTHG	family
DUF429	PF04250.8	gi|557694132|ref|YP_008797186.1|	-	3e-25	88.7	0.0	3.9e-25	88.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
Glyoxalase	PF00903.20	gi|557694133|ref|YP_008797187.1|	-	4.9e-26	91.2	0.0	1.7e-14	53.9	0.0	2.1	2	0	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|557694133|ref|YP_008797187.1|	-	9.4e-15	55.1	0.0	9.1e-07	29.4	0.0	2.2	2	0	0	2	2	2	2	Glyoxalase-like	domain
CarboxypepD_reg	PF13620.1	gi|557694134|ref|YP_008797188.1|	-	2e-09	37.3	1.9	9e-09	35.2	0.5	2.0	2	0	0	2	2	2	1	Carboxypeptidase	regulatory-like	domain
DUF4480	PF13715.1	gi|557694134|ref|YP_008797188.1|	-	0.0017	18.3	0.1	0.0038	17.2	0.0	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4480)
UnbV_ASPIC	PF07593.7	gi|557694134|ref|YP_008797188.1|	-	0.047	13.3	0.2	0.073	12.7	0.1	1.3	1	0	0	1	1	1	0	ASPIC	and	UnbV
UCR_Fe-S_N	PF10399.4	gi|557694135|ref|YP_008797189.1|	-	0.002	17.2	1.2	0.002	17.2	0.8	1.7	2	0	0	2	2	2	1	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
DUF1183	PF06682.7	gi|557694135|ref|YP_008797189.1|	-	0.11	12.0	0.4	0.17	11.4	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1183)
DUF1218	PF06749.7	gi|557694136|ref|YP_008797190.1|	-	0.0021	18.4	3.5	0.0065	16.8	2.4	1.9	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1218)
MOZART2	PF12926.2	gi|557694136|ref|YP_008797190.1|	-	0.084	12.4	0.1	0.16	11.5	0.1	1.4	1	0	0	1	1	1	0	Mitotic-spindle	organizing	gamma-tubulin	ring	associated
DUF3989	PF13150.1	gi|557694136|ref|YP_008797190.1|	-	0.29	10.6	0.1	0.29	10.6	0.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3989)
DUF3317	PF11779.3	gi|557694136|ref|YP_008797190.1|	-	5.8	6.4	8.7	15	5.0	0.2	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3317)
ThiS	PF02597.15	gi|557694137|ref|YP_008797191.1|	-	2.7e-15	56.5	0.0	5.3e-15	55.6	0.0	1.5	1	0	0	1	1	1	1	ThiS	family
MraZ	PF02381.13	gi|557694137|ref|YP_008797191.1|	-	5.9e-08	32.3	0.1	0.0068	16.1	0.0	3.2	2	1	1	3	3	3	2	MraZ	protein
Urm1	PF09138.6	gi|557694137|ref|YP_008797191.1|	-	1.8e-05	24.7	0.4	3.4e-05	23.8	0.0	1.6	2	0	0	2	2	2	1	Urm1	(Ubiquitin	related	modifier)
Lambda_tail_I	PF06805.7	gi|557694137|ref|YP_008797191.1|	-	5.2e-05	22.9	0.0	9.7e-05	22.1	0.0	1.5	1	0	0	1	1	1	1	Bacteriophage	lambda	tail	assembly	protein	I
Arch_ATPase	PF01637.13	gi|557694137|ref|YP_008797191.1|	-	0.077	12.6	0.1	0.095	12.3	0.0	1.2	1	0	0	1	1	1	0	Archaeal	ATPase
Prok-JAB	PF14464.1	gi|557694138|ref|YP_008797192.1|	-	6.4e-19	67.4	0.0	7.4e-19	67.2	0.0	1.1	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
JAB	PF01398.16	gi|557694138|ref|YP_008797192.1|	-	1.5e-09	37.5	0.0	2e-09	37.1	0.0	1.2	1	0	0	1	1	1	1	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
PALP	PF00291.20	gi|557694139|ref|YP_008797193.1|	-	2.2e-54	184.7	0.0	2.5e-54	184.5	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
HTH_10	PF04967.7	gi|557694141|ref|YP_008797195.1|	-	1.1e-18	66.4	0.0	1.8e-18	65.8	0.0	1.3	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|557694141|ref|YP_008797195.1|	-	2e-11	43.0	0.0	4.2e-11	41.9	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
GerE	PF00196.14	gi|557694141|ref|YP_008797195.1|	-	2.1e-07	30.1	0.1	3.6e-06	26.2	0.0	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
HTH_IclR	PF09339.5	gi|557694141|ref|YP_008797195.1|	-	4.3e-07	29.4	0.6	1.4e-06	27.7	0.1	2.0	2	0	0	2	2	1	1	IclR	helix-turn-helix	domain
HTH_5	PF01022.15	gi|557694141|ref|YP_008797195.1|	-	4.4e-06	26.2	0.1	2.1e-05	24.1	0.0	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|557694141|ref|YP_008797195.1|	-	1.2e-05	24.9	1.3	1.7e-05	24.3	0.1	1.9	2	1	0	2	2	1	1	MarR	family
HTH_20	PF12840.2	gi|557694141|ref|YP_008797195.1|	-	1.4e-05	24.7	0.2	5.8e-05	22.8	0.2	2.1	1	1	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|557694141|ref|YP_008797195.1|	-	4.9e-05	22.6	2.0	0.00021	20.6	0.3	2.4	2	1	0	2	2	2	1	Sigma-70,	region	4
HTH_38	PF13936.1	gi|557694141|ref|YP_008797195.1|	-	9.3e-05	21.9	0.3	0.00025	20.5	0.2	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|557694141|ref|YP_008797195.1|	-	0.00013	21.2	0.4	0.00013	21.2	0.3	1.7	2	0	0	2	2	1	1	Winged	helix-turn-helix	DNA-binding
Sigma70_ECF	PF07638.6	gi|557694141|ref|YP_008797195.1|	-	0.00067	19.3	0.0	0.0012	18.5	0.0	1.4	1	0	0	1	1	1	1	ECF	sigma	factor
MarR	PF01047.17	gi|557694141|ref|YP_008797195.1|	-	0.0011	18.5	0.1	0.0043	16.7	0.0	2.0	2	0	0	2	2	2	1	MarR	family
HTH_23	PF13384.1	gi|557694141|ref|YP_008797195.1|	-	0.0023	17.5	0.1	0.0067	16.0	0.1	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_11	PF08279.7	gi|557694141|ref|YP_008797195.1|	-	0.0026	17.3	0.0	0.0064	16.1	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_AsnC-type	PF13404.1	gi|557694141|ref|YP_008797195.1|	-	0.0054	16.2	0.7	0.011	15.2	0.1	1.7	2	0	0	2	2	1	1	AsnC-type	helix-turn-helix	domain
HTH_27	PF13463.1	gi|557694141|ref|YP_008797195.1|	-	0.0058	16.9	0.0	0.045	14.0	0.0	2.1	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TetR_N	PF00440.18	gi|557694141|ref|YP_008797195.1|	-	0.0088	15.6	0.0	0.018	14.6	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
LacI	PF00356.16	gi|557694141|ref|YP_008797195.1|	-	0.01	15.4	0.2	0.026	14.1	0.1	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	lacI	family
HTH_Tnp_ISL3	PF13542.1	gi|557694141|ref|YP_008797195.1|	-	0.013	14.6	0.2	0.026	13.6	0.2	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_40	PF14493.1	gi|557694141|ref|YP_008797195.1|	-	0.019	15.1	0.0	0.043	14.0	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Homeobox	PF00046.24	gi|557694141|ref|YP_008797195.1|	-	0.026	14.1	0.0	0.065	12.8	0.0	1.7	1	0	0	1	1	1	0	Homeobox	domain
HTH_28	PF13518.1	gi|557694141|ref|YP_008797195.1|	-	0.027	14.4	0.1	0.079	12.9	0.1	1.8	2	0	0	2	2	1	0	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|557694141|ref|YP_008797195.1|	-	0.034	14.2	0.0	0.067	13.3	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF3562	PF12085.3	gi|557694141|ref|YP_008797195.1|	-	0.034	13.9	0.1	0.33	10.8	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3562)
KorB	PF08535.5	gi|557694141|ref|YP_008797195.1|	-	0.048	13.8	0.0	0.13	12.4	0.0	1.7	1	0	0	1	1	1	0	KorB	domain
HTH_1	PF00126.22	gi|557694141|ref|YP_008797195.1|	-	0.049	13.3	1.6	0.11	12.2	0.3	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_Tnp_4	PF13613.1	gi|557694141|ref|YP_008797195.1|	-	0.059	12.9	0.1	0.16	11.5	0.0	1.8	2	0	0	2	2	2	0	Helix-turn-helix	of	DDE	superfamily	endonuclease
HTH_17	PF12728.2	gi|557694141|ref|YP_008797195.1|	-	0.069	13.4	0.1	0.18	12.0	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_22	PF13309.1	gi|557694141|ref|YP_008797195.1|	-	0.07	12.8	0.1	0.76	9.5	0.0	2.5	3	0	0	3	3	3	0	HTH	domain
Sigma54_DBD	PF04552.8	gi|557694141|ref|YP_008797195.1|	-	0.074	12.5	0.1	0.14	11.6	0.1	1.5	1	0	0	1	1	1	0	Sigma-54,	DNA	binding	domain
UPF0122	PF04297.9	gi|557694141|ref|YP_008797195.1|	-	0.086	12.8	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_3	PF01381.17	gi|557694141|ref|YP_008797195.1|	-	0.092	12.6	0.1	0.19	11.6	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix
LexA_DNA_bind	PF01726.11	gi|557694141|ref|YP_008797195.1|	-	0.094	12.2	1.0	0.46	10.0	0.7	2.1	1	1	0	1	1	1	0	LexA	DNA	binding	domain
HTH_AraC	PF00165.18	gi|557694141|ref|YP_008797195.1|	-	0.11	12.3	0.2	0.77	9.6	0.0	2.2	1	1	1	2	2	2	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
TrmB	PF01978.14	gi|557694141|ref|YP_008797195.1|	-	0.12	12.0	0.1	0.56	9.9	0.0	2.1	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_Tnp_Tc3_1	PF11427.3	gi|557694141|ref|YP_008797195.1|	-	0.13	11.9	0.7	1.2	8.8	0.1	2.2	2	0	0	2	2	2	0	Tc3	transposase
NUMOD1	PF07453.8	gi|557694141|ref|YP_008797195.1|	-	0.14	12.0	0.1	1	9.3	0.0	2.1	2	0	0	2	2	2	0	NUMOD1	domain
Cu-oxidase_3	PF07732.10	gi|557694142|ref|YP_008797196.1|	-	2.7e-11	43.2	0.1	2.8e-09	36.7	0.0	2.7	2	0	0	2	2	2	1	Multicopper	oxidase
Cupredoxin_1	PF13473.1	gi|557694142|ref|YP_008797196.1|	-	4.7e-11	42.5	0.0	2e-05	24.4	0.0	2.7	2	1	0	2	2	2	2	Cupredoxin-like	domain
Cu-oxidase_2	PF07731.9	gi|557694142|ref|YP_008797196.1|	-	1.6e-09	37.3	0.1	2.6e-06	26.9	0.1	3.4	2	1	0	2	2	2	1	Multicopper	oxidase
Copper-bind	PF00127.15	gi|557694142|ref|YP_008797196.1|	-	3.7e-07	30.3	0.2	0.00091	19.4	0.0	2.8	2	0	0	2	2	2	2	Copper	binding	proteins,	plastocyanin/azurin	family
SCO1-SenC	PF02630.9	gi|557694143|ref|YP_008797197.1|	-	2.6e-28	98.7	0.0	3.3e-28	98.4	0.0	1.1	1	0	0	1	1	1	1	SCO1/SenC
Redoxin	PF08534.5	gi|557694143|ref|YP_008797197.1|	-	2.2e-07	30.5	0.0	2.7e-07	30.2	0.0	1.1	1	0	0	1	1	1	1	Redoxin
AhpC-TSA	PF00578.16	gi|557694143|ref|YP_008797197.1|	-	3.7e-06	26.6	0.0	4.8e-06	26.2	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Thioredoxin_8	PF13905.1	gi|557694143|ref|YP_008797197.1|	-	0.0011	19.0	0.0	0.0017	18.4	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like
GSHPx	PF00255.14	gi|557694143|ref|YP_008797197.1|	-	0.045	13.1	0.0	0.16	11.3	0.0	1.7	2	0	0	2	2	2	0	Glutathione	peroxidase
NACHT	PF05729.7	gi|557694143|ref|YP_008797197.1|	-	0.048	13.3	0.0	0.085	12.5	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
PP2C_C	PF07830.8	gi|557694143|ref|YP_008797197.1|	-	0.12	12.4	0.0	0.21	11.7	0.0	1.4	1	0	0	1	1	1	0	Protein	serine/threonine	phosphatase	2C,	C-terminal	domain
ABC2_membrane	PF01061.19	gi|557694146|ref|YP_008797200.1|	-	1.7e-09	37.1	17.5	1.7e-09	37.1	12.1	1.6	1	1	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|557694146|ref|YP_008797200.1|	-	5.3e-05	22.4	18.4	5.3e-05	22.4	12.8	1.5	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|557694146|ref|YP_008797200.1|	-	7.6e-05	21.9	16.6	9.5e-05	21.6	11.5	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
DUF1469	PF07332.6	gi|557694146|ref|YP_008797200.1|	-	5.3	6.8	18.9	2.5	7.8	0.1	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1469)
ABC_tran	PF00005.22	gi|557694147|ref|YP_008797201.1|	-	1.2e-24	87.1	0.0	2.5e-24	86.1	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694147|ref|YP_008797201.1|	-	4.2e-16	59.7	0.2	2.1e-10	41.0	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|557694147|ref|YP_008797201.1|	-	3.3e-05	23.3	0.1	8e-05	22.0	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Rad17	PF03215.10	gi|557694147|ref|YP_008797201.1|	-	3.9e-05	22.5	0.0	5.6e-05	22.0	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
DUF4162	PF13732.1	gi|557694147|ref|YP_008797201.1|	-	0.003	18.0	0.1	0.0082	16.6	0.1	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.1	gi|557694147|ref|YP_008797201.1|	-	0.0031	17.8	0.0	0.0061	16.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|557694147|ref|YP_008797201.1|	-	0.014	14.8	0.1	0.022	14.1	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|557694147|ref|YP_008797201.1|	-	0.022	15.5	0.2	0.095	13.5	0.1	2.0	2	1	0	2	2	2	0	AAA	domain
MukB	PF04310.7	gi|557694147|ref|YP_008797201.1|	-	0.025	13.8	0.0	0.046	13.0	0.0	1.4	1	0	0	1	1	1	0	MukB	N-terminal
AAA_19	PF13245.1	gi|557694147|ref|YP_008797201.1|	-	0.032	13.9	2.3	0.23	11.2	0.1	2.5	3	0	0	3	3	2	0	Part	of	AAA	domain
AAA_18	PF13238.1	gi|557694147|ref|YP_008797201.1|	-	0.034	14.4	0.1	0.11	12.8	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_15	PF13175.1	gi|557694147|ref|YP_008797201.1|	-	0.048	12.7	0.0	4.4	6.2	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557694147|ref|YP_008797201.1|	-	0.072	13.2	0.1	1	9.5	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.10	gi|557694147|ref|YP_008797201.1|	-	0.085	12.5	0.1	6.8	6.3	0.0	2.8	3	0	0	3	3	3	0	NTPase
AAA	PF00004.24	gi|557694147|ref|YP_008797201.1|	-	0.09	12.9	0.2	0.54	10.4	0.0	2.3	3	0	0	3	3	3	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
UPF0079	PF02367.12	gi|557694147|ref|YP_008797201.1|	-	0.11	12.0	0.1	0.25	10.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
MobB	PF03205.9	gi|557694147|ref|YP_008797201.1|	-	0.12	12.1	1.0	0.23	11.1	0.1	2.0	3	0	0	3	3	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|557694147|ref|YP_008797201.1|	-	0.14	11.6	0.4	0.36	10.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|557694147|ref|YP_008797201.1|	-	0.16	11.9	0.0	0.39	10.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|557694147|ref|YP_008797201.1|	-	0.16	11.9	0.1	0.58	10.1	0.0	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
HTH_10	PF04967.7	gi|557694148|ref|YP_008797202.1|	-	3.8e-17	61.5	0.0	5.9e-17	60.9	0.0	1.3	1	0	0	1	1	1	1	HTH	DNA	binding	domain
GHMP_kinases_C	PF08544.8	gi|557694148|ref|YP_008797202.1|	-	0.011	15.9	0.0	0.13	12.4	0.0	2.4	3	0	0	3	3	3	0	GHMP	kinases	C	terminal
HTH_24	PF13412.1	gi|557694148|ref|YP_008797202.1|	-	0.055	12.8	0.0	0.11	11.8	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Cu-oxidase_3	PF07732.10	gi|557694149|ref|YP_008797203.1|	-	1.1e-20	73.5	2.0	4.2e-15	55.5	0.7	2.4	2	1	0	2	2	2	2	Multicopper	oxidase
Cu-oxidase_2	PF07731.9	gi|557694149|ref|YP_008797203.1|	-	1.6e-15	56.8	8.4	2.2e-09	36.9	0.7	3.2	2	2	0	2	2	2	2	Multicopper	oxidase
WW	PF00397.21	gi|557694149|ref|YP_008797203.1|	-	0.059	13.2	2.8	0.16	11.8	1.9	1.8	1	0	0	1	1	1	0	WW	domain
DsbD	PF02683.10	gi|557694149|ref|YP_008797203.1|	-	0.12	11.9	0.2	0.22	11.1	0.1	1.4	2	0	0	2	2	2	0	Cytochrome	C	biogenesis	protein	transmembrane	region
Cupredoxin_1	PF13473.1	gi|557694150|ref|YP_008797204.1|	-	5.6e-10	39.0	0.0	7.4e-10	38.6	0.0	1.3	1	1	0	1	1	1	1	Cupredoxin-like	domain
Copper-bind	PF00127.15	gi|557694150|ref|YP_008797204.1|	-	5.7e-10	39.3	0.1	9.5e-08	32.1	0.0	2.2	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
DUF948	PF06103.6	gi|557694150|ref|YP_008797204.1|	-	0.16	11.8	0.5	0.35	10.7	0.3	1.5	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
NosL	PF05573.7	gi|557694151|ref|YP_008797205.1|	-	9.4e-12	44.8	0.0	1.7e-11	43.9	0.0	1.3	1	0	0	1	1	1	1	NosL
AhpC-TSA	PF00578.16	gi|557694151|ref|YP_008797205.1|	-	7.1e-11	41.8	0.0	1.4e-10	40.9	0.0	1.5	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|557694151|ref|YP_008797205.1|	-	2e-10	40.4	0.1	4.1e-10	39.3	0.0	1.5	1	1	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|557694151|ref|YP_008797205.1|	-	4.3e-06	26.7	0.0	6.6e-06	26.1	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_7	PF13899.1	gi|557694151|ref|YP_008797205.1|	-	4.6e-06	26.5	0.0	9.9e-06	25.4	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|557694151|ref|YP_008797205.1|	-	5.9e-05	23.2	0.0	0.0001	22.4	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|557694151|ref|YP_008797205.1|	-	0.0003	20.4	0.0	0.00055	19.5	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin
SCO1-SenC	PF02630.9	gi|557694151|ref|YP_008797205.1|	-	0.0019	17.8	0.0	0.0032	17.1	0.0	1.3	1	0	0	1	1	1	1	SCO1/SenC
IBP39	PF11422.3	gi|557694151|ref|YP_008797205.1|	-	0.07	12.6	0.0	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	Initiator	binding	protein	39	kDa
TrmB	PF01978.14	gi|557694152|ref|YP_008797206.1|	-	3.2e-05	23.5	0.4	5.1e-05	22.8	0.3	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|557694152|ref|YP_008797206.1|	-	7.7e-05	22.2	1.6	0.00012	21.6	1.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|557694152|ref|YP_008797206.1|	-	0.00038	19.9	0.1	0.00063	19.2	0.1	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|557694152|ref|YP_008797206.1|	-	0.00079	18.7	0.3	0.0011	18.3	0.2	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.1	gi|557694152|ref|YP_008797206.1|	-	0.0012	18.5	0.4	0.002	17.8	0.3	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
AA_permease	PF00324.16	gi|557694152|ref|YP_008797206.1|	-	0.0073	14.6	1.8	0.0093	14.3	1.3	1.0	1	0	0	1	1	1	1	Amino	acid	permease
HTH_27	PF13463.1	gi|557694152|ref|YP_008797206.1|	-	0.013	15.7	0.5	0.021	15.1	0.4	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Rrf2	PF02082.15	gi|557694152|ref|YP_008797206.1|	-	0.036	14.1	0.2	0.066	13.3	0.2	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
DctQ	PF04290.7	gi|557694152|ref|YP_008797206.1|	-	0.051	13.3	9.7	0.071	12.8	6.8	1.2	1	0	0	1	1	1	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
Sigma70_r4	PF04545.11	gi|557694152|ref|YP_008797206.1|	-	0.12	11.6	1.1	0.21	10.9	0.7	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
Yip1	PF04893.12	gi|557694152|ref|YP_008797206.1|	-	0.15	11.5	6.7	0.19	11.2	4.7	1.2	1	0	0	1	1	1	0	Yip1	domain
PepSY	PF03413.14	gi|557694153|ref|YP_008797207.1|	-	0.0088	16.6	0.0	6	7.5	0.0	2.5	2	0	0	2	2	2	2	Peptidase	propeptide	and	YPEB	domain
DUF4064	PF13273.1	gi|557694154|ref|YP_008797208.1|	-	2.4e-05	24.3	9.8	2.4e-05	24.3	6.8	2.6	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF4064)
SpoIIIAC	PF06686.6	gi|557694154|ref|YP_008797208.1|	-	0.051	13.3	6.9	0.28	11.0	0.1	2.7	2	1	1	3	3	3	0	Stage	III	sporulation	protein	AC/AD	protein	family
Trp_oprn_chp	PF09534.5	gi|557694154|ref|YP_008797208.1|	-	5.4	6.5	8.8	3.1	7.3	0.7	2.3	2	1	0	2	2	2	0	Tryptophan-associated	transmembrane	protein	(Trp_oprn_chp)
DUF411	PF04214.8	gi|557694155|ref|YP_008797209.1|	-	3.5e-26	90.5	0.1	4.9e-26	90.0	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF
Glutaredoxin	PF00462.19	gi|557694155|ref|YP_008797209.1|	-	0.00028	20.7	0.1	0.00055	19.8	0.1	1.5	1	0	0	1	1	1	1	Glutaredoxin
DUF836	PF05768.9	gi|557694155|ref|YP_008797209.1|	-	0.075	13.2	0.1	0.12	12.6	0.1	1.4	1	0	0	1	1	1	0	Glutaredoxin-like	domain	(DUF836)
CTI	PF06934.6	gi|557694155|ref|YP_008797209.1|	-	0.083	11.1	0.0	0.1	10.8	0.0	1.1	1	0	0	1	1	1	0	Fatty	acid	cis/trans	isomerase	(CTI)
HTH_24	PF13412.1	gi|557694156|ref|YP_008797210.1|	-	0.016	14.5	0.0	0.032	13.6	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|557694156|ref|YP_008797210.1|	-	0.09	12.5	0.0	0.25	11.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|557694156|ref|YP_008797210.1|	-	0.11	12.3	0.5	0.24	11.2	0.3	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
OAD_gamma	PF04277.8	gi|557694157|ref|YP_008797211.1|	-	0.82	10.0	5.0	3.7	7.9	3.5	1.9	1	1	0	1	1	1	0	Oxaloacetate	decarboxylase,	gamma	chain
FAP	PF07174.6	gi|557694157|ref|YP_008797211.1|	-	8.2	5.6	14.5	10	5.3	10.1	1.0	1	0	0	1	1	1	0	Fibronectin-attachment	protein	(FAP)
Uso1_p115_C	PF04871.8	gi|557694158|ref|YP_008797212.1|	-	0.22	11.4	4.0	0.49	10.3	2.8	1.6	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
TMPIT	PF07851.8	gi|557694158|ref|YP_008797212.1|	-	4.8	6.1	8.0	0.12	11.3	1.2	1.4	2	0	0	2	2	2	0	TMPIT-like	protein
SprT-like	PF10263.4	gi|557694160|ref|YP_008797214.1|	-	0.03	13.9	0.0	0.035	13.7	0.0	1.2	1	0	0	1	1	1	0	SprT-like	family
DUF45	PF01863.12	gi|557694160|ref|YP_008797214.1|	-	0.16	11.7	0.1	0.6	9.8	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF45
LAGLIDADG_3	PF14528.1	gi|557694161|ref|YP_008797215.1|	-	2e-17	63.1	0.1	1.3e-14	54.2	0.1	2.5	2	0	0	2	2	2	2	LAGLIDADG-like	domain
Hom_end	PF05204.9	gi|557694161|ref|YP_008797215.1|	-	0.016	15.1	0.0	0.053	13.4	0.0	1.8	3	0	0	3	3	3	0	Homing	endonuclease
Auto_anti-p27	PF06677.7	gi|557694162|ref|YP_008797216.1|	-	2.8e-11	42.9	0.8	6e-11	41.9	0.3	1.7	2	0	0	2	2	2	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DNA_ligase_ZBD	PF03119.11	gi|557694162|ref|YP_008797216.1|	-	0.039	13.6	6.6	0.35	10.5	2.2	2.4	1	1	1	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Rad50_zn_hook	PF04423.9	gi|557694162|ref|YP_008797216.1|	-	0.078	12.4	0.2	0.22	11.0	0.0	1.8	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
zf-C2HC5	PF06221.8	gi|557694162|ref|YP_008797216.1|	-	0.092	12.5	0.8	6.1	6.6	0.0	2.2	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
zinc-ribbons_6	PF07191.7	gi|557694162|ref|YP_008797216.1|	-	0.12	12.1	0.2	0.19	11.5	0.2	1.3	1	0	0	1	1	1	0	zinc-ribbons
GFA	PF04828.9	gi|557694162|ref|YP_008797216.1|	-	0.13	12.1	0.1	2.3	8.2	0.0	2.3	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-FPG_IleRS	PF06827.9	gi|557694162|ref|YP_008797216.1|	-	0.5	10.0	2.8	11	5.7	0.4	2.3	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Cdc6_C	PF09079.6	gi|557694163|ref|YP_008797217.1|	-	2.9e-20	71.7	0.4	1.9e-19	69.1	0.1	2.4	3	1	1	4	4	4	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|557694163|ref|YP_008797217.1|	-	4.2e-12	46.3	0.0	9.2e-12	45.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|557694163|ref|YP_008797217.1|	-	1.9e-08	34.5	0.0	3.9e-08	33.5	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|557694163|ref|YP_008797217.1|	-	2e-07	31.1	0.8	1.1e-05	25.4	0.0	3.1	2	1	0	2	2	2	1	AAA	ATPase	domain
Sigma54_activat	PF00158.21	gi|557694163|ref|YP_008797217.1|	-	5.4e-05	22.7	0.0	9.1e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	Sigma-54	interaction	domain
Arch_ATPase	PF01637.13	gi|557694163|ref|YP_008797217.1|	-	0.0064	16.2	0.0	0.025	14.2	0.0	2.0	2	1	0	2	2	2	1	Archaeal	ATPase
NB-ARC	PF00931.17	gi|557694163|ref|YP_008797217.1|	-	0.016	14.1	0.0	0.021	13.6	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_5	PF07728.9	gi|557694163|ref|YP_008797217.1|	-	0.023	14.4	0.0	0.12	12.1	0.0	2.2	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_32	PF13654.1	gi|557694163|ref|YP_008797217.1|	-	0.025	13.2	1.3	2.4	6.7	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
ORC5_C	PF14630.1	gi|557694163|ref|YP_008797217.1|	-	0.033	13.6	0.0	0.7	9.3	0.0	2.1	1	1	0	2	2	2	0	Origin	recognition	complex	(ORC)	subunit	5	C-terminus
PIF1	PF05970.9	gi|557694163|ref|YP_008797217.1|	-	0.046	12.6	0.0	0.066	12.1	0.0	1.3	1	0	0	1	1	1	0	PIF1-like	helicase
AAA_24	PF13479.1	gi|557694163|ref|YP_008797217.1|	-	0.062	12.8	0.1	0.1	12.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|557694163|ref|YP_008797217.1|	-	0.072	12.0	0.0	0.091	11.7	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
RNA_helicase	PF00910.17	gi|557694163|ref|YP_008797217.1|	-	0.09	12.9	0.0	0.17	12.0	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
DEAD	PF00270.24	gi|557694163|ref|YP_008797217.1|	-	0.16	11.4	0.1	4.2	6.8	0.0	2.2	1	1	0	2	2	2	0	DEAD/DEAH	box	helicase
Pox_D5	PF03288.11	gi|557694163|ref|YP_008797217.1|	-	0.17	12.1	0.0	0.39	10.9	0.0	1.6	1	0	0	1	1	1	0	Poxvirus	D5	protein-like
Endonuclease_5	PF04493.9	gi|557694164|ref|YP_008797218.1|	-	7.6e-40	136.4	0.0	9.2e-40	136.1	0.0	1.1	1	0	0	1	1	1	1	Endonuclease	V
DUF99	PF01949.11	gi|557694164|ref|YP_008797218.1|	-	0.025	13.6	0.0	0.068	12.2	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF99
Methyltransf_11	PF08241.7	gi|557694165|ref|YP_008797219.1|	-	7e-14	52.0	0.0	1.1e-13	51.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|557694165|ref|YP_008797219.1|	-	5.6e-12	45.9	0.2	1e-11	45.0	0.2	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|557694165|ref|YP_008797219.1|	-	6.5e-08	32.2	0.0	9e-08	31.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|557694165|ref|YP_008797219.1|	-	1.1e-07	32.2	0.0	1.9e-07	31.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|557694165|ref|YP_008797219.1|	-	2.9e-07	30.3	0.0	3.4e-07	30.1	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557694165|ref|YP_008797219.1|	-	0.00011	22.7	0.0	0.00016	22.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|557694165|ref|YP_008797219.1|	-	0.0026	17.1	0.0	0.0032	16.8	0.0	1.1	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_26	PF13659.1	gi|557694165|ref|YP_008797219.1|	-	0.0036	17.3	0.1	0.005	16.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|557694165|ref|YP_008797219.1|	-	0.053	13.2	0.0	0.065	12.9	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
NTP_transf_2	PF01909.18	gi|557694166|ref|YP_008797220.1|	-	2.4e-06	27.7	0.0	4.6e-06	26.8	0.0	1.5	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|557694166|ref|YP_008797220.1|	-	0.0036	16.9	0.0	0.0063	16.1	0.0	1.3	1	0	0	1	1	1	1	Putative	nucleotidyltransferase	DUF294
IMPDH	PF00478.20	gi|557694167|ref|YP_008797221.1|	-	8.1e-138	459.1	4.4	9.5e-138	458.8	3.1	1.0	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
CBS	PF00571.23	gi|557694167|ref|YP_008797221.1|	-	3.8e-25	87.3	0.0	8.6e-12	44.6	0.0	2.8	2	0	0	2	2	2	2	CBS	domain
NMO	PF03060.10	gi|557694167|ref|YP_008797221.1|	-	1.8e-14	53.6	6.7	1.8e-06	27.3	0.3	3.1	3	0	0	3	3	3	3	Nitronate	monooxygenase
FMN_dh	PF01070.13	gi|557694167|ref|YP_008797221.1|	-	2e-11	43.3	4.9	1.5e-10	40.4	1.7	2.9	3	0	0	3	3	3	1	FMN-dependent	dehydrogenase
DHO_dh	PF01180.16	gi|557694167|ref|YP_008797221.1|	-	2.8e-05	23.2	4.4	0.00061	18.8	0.7	2.4	1	1	1	2	2	2	2	Dihydroorotate	dehydrogenase
His_biosynth	PF00977.16	gi|557694167|ref|YP_008797221.1|	-	4.2e-05	22.9	6.0	0.00021	20.6	0.1	2.7	2	1	0	3	3	3	1	Histidine	biosynthesis	protein
PEP_mutase	PF13714.1	gi|557694167|ref|YP_008797221.1|	-	6.3e-05	22.3	2.7	9.2e-05	21.7	0.7	2.1	1	1	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
Glu_synthase	PF01645.12	gi|557694167|ref|YP_008797221.1|	-	0.0022	16.9	5.7	0.0045	15.9	3.8	1.7	1	1	0	1	1	1	1	Conserved	region	in	glutamate	synthase
Dus	PF01207.12	gi|557694167|ref|YP_008797221.1|	-	0.0043	15.9	0.5	0.012	14.4	0.0	1.9	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
ThiG	PF05690.9	gi|557694167|ref|YP_008797221.1|	-	0.026	13.5	6.7	0.021	13.8	1.6	2.6	2	1	1	3	3	3	0	Thiazole	biosynthesis	protein	ThiG
Aldolase	PF01081.14	gi|557694167|ref|YP_008797221.1|	-	0.46	9.6	7.2	0.13	11.4	2.1	2.2	2	1	0	2	2	2	0	KDPG	and	KHG	aldolase
Adenylsucc_synt	PF00709.16	gi|557694168|ref|YP_008797222.1|	-	2e-132	441.8	0.0	6.1e-132	440.2	0.0	1.6	1	1	0	1	1	1	1	Adenylosuccinate	synthetase
Lyase_1	PF00206.15	gi|557694169|ref|YP_008797223.1|	-	3.5e-35	121.6	0.0	5.2e-35	121.1	0.0	1.2	1	0	0	1	1	1	1	Lyase
ASL_C	PF08328.6	gi|557694169|ref|YP_008797223.1|	-	5.9e-14	51.8	0.0	1.5e-13	50.5	0.0	1.7	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminal
PmbA_TldD	PF01523.11	gi|557694170|ref|YP_008797224.1|	-	8.2e-53	179.5	0.3	1e-52	179.2	0.2	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
APH	PF01636.18	gi|557694171|ref|YP_008797225.1|	-	5.4e-08	32.8	0.0	1.1e-06	28.5	0.0	2.2	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|557694171|ref|YP_008797225.1|	-	0.00082	18.5	0.0	0.0028	16.7	0.0	1.8	2	0	0	2	2	2	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
NTP_transf_2	PF01909.18	gi|557694172|ref|YP_008797226.1|	-	0.03	14.6	0.0	0.064	13.5	0.0	1.6	1	0	0	1	1	1	0	Nucleotidyltransferase	domain
NeuB	PF03102.9	gi|557694172|ref|YP_008797226.1|	-	0.037	13.1	0.0	0.063	12.4	0.0	1.3	1	0	0	1	1	1	0	NeuB	family
NB-ARC	PF00931.17	gi|557694172|ref|YP_008797226.1|	-	0.094	11.5	0.1	0.19	10.5	0.1	1.5	1	1	0	1	1	1	0	NB-ARC	domain
NTP_transf_2	PF01909.18	gi|557694173|ref|YP_008797227.1|	-	2e-05	24.8	0.0	3.4e-05	24.0	0.0	1.4	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
POR	PF01558.13	gi|557694174|ref|YP_008797228.1|	-	7.1e-31	107.4	0.0	9.2e-31	107.0	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4	PF00037.22	gi|557694175|ref|YP_008797229.1|	-	9.2e-11	40.8	21.0	1.8e-05	24.1	5.8	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|557694175|ref|YP_008797229.1|	-	2.5e-08	33.6	23.7	7.7e-07	28.8	10.1	1.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|557694175|ref|YP_008797229.1|	-	4.9e-08	33.2	39.4	9.8e-06	25.8	10.4	1.8	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|557694175|ref|YP_008797229.1|	-	1.5e-07	30.9	17.0	0.00012	21.7	3.1	2.5	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|557694175|ref|YP_008797229.1|	-	9e-07	28.5	14.1	1.6e-06	27.8	9.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|557694175|ref|YP_008797229.1|	-	1.6e-05	25.5	11.7	0.033	14.9	4.8	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.1	gi|557694175|ref|YP_008797229.1|	-	1.9e-05	24.8	15.3	2.7e-05	24.3	10.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|557694175|ref|YP_008797229.1|	-	4.3e-05	23.2	18.1	0.016	15.0	2.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|557694175|ref|YP_008797229.1|	-	0.0072	16.8	11.9	0.065	13.8	3.5	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|557694175|ref|YP_008797229.1|	-	0.0092	15.8	8.1	0.011	15.5	5.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|557694175|ref|YP_008797229.1|	-	0.035	14.4	16.4	0.29	11.5	2.1	2.4	1	1	1	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|557694175|ref|YP_008797229.1|	-	0.048	14.0	14.5	0.64	10.3	0.8	2.2	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|557694175|ref|YP_008797229.1|	-	0.11	12.4	14.7	1.3	9.1	1.3	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|557694175|ref|YP_008797229.1|	-	0.28	11.6	14.5	0.49	10.8	1.8	2.5	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|557694175|ref|YP_008797229.1|	-	0.37	11.2	10.4	5.2	7.5	0.2	2.2	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Sar8_2	PF03058.9	gi|557694175|ref|YP_008797229.1|	-	4.4	7.6	7.1	65	3.9	4.9	2.0	1	1	0	1	1	1	0	Sar8.2	family
POR_N	PF01855.14	gi|557694176|ref|YP_008797230.1|	-	1.4e-70	237.3	1.3	1.8e-70	237.0	0.9	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
TPP_enzyme_N	PF02776.13	gi|557694176|ref|YP_008797230.1|	-	0.0021	17.5	1.2	0.0036	16.7	0.8	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|557694177|ref|YP_008797231.1|	-	2.1e-27	95.5	0.0	2.8e-27	95.1	0.0	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Cupin_2	PF07883.6	gi|557694178|ref|YP_008797232.1|	-	1.1e-21	76.0	0.4	1.4e-21	75.7	0.3	1.2	1	0	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.17	gi|557694178|ref|YP_008797232.1|	-	1.2e-10	40.9	0.0	1.6e-10	40.5	0.0	1.2	1	0	0	1	1	1	1	Cupin
AraC_binding	PF02311.14	gi|557694178|ref|YP_008797232.1|	-	9e-09	35.1	0.1	1.1e-08	34.8	0.1	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
MannoseP_isomer	PF01050.13	gi|557694178|ref|YP_008797232.1|	-	4e-06	26.5	0.0	4.7e-06	26.3	0.0	1.2	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Cupin_3	PF05899.7	gi|557694178|ref|YP_008797232.1|	-	6.7e-05	22.1	0.1	0.0001	21.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
EutQ	PF06249.7	gi|557694178|ref|YP_008797232.1|	-	0.00021	20.8	0.0	0.00033	20.2	0.0	1.3	1	0	0	1	1	1	1	Ethanolamine	utilisation	protein	EutQ
Pirin	PF02678.11	gi|557694178|ref|YP_008797232.1|	-	0.0022	17.8	0.0	0.0026	17.6	0.0	1.2	1	0	0	1	1	1	1	Pirin
CENP-C_C	PF11699.3	gi|557694178|ref|YP_008797232.1|	-	0.0023	17.8	0.0	0.0035	17.2	0.0	1.4	1	0	0	1	1	1	1	Mif2/CENP-C	like
DUF1637	PF07847.7	gi|557694178|ref|YP_008797232.1|	-	0.0064	15.8	0.0	0.029	13.7	0.0	1.7	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1637)
Auxin_BP	PF02041.11	gi|557694178|ref|YP_008797232.1|	-	0.011	15.1	0.0	0.069	12.5	0.0	1.9	1	1	0	1	1	1	0	Auxin	binding	protein
Cupin_7	PF12973.2	gi|557694178|ref|YP_008797232.1|	-	0.022	14.5	0.0	0.033	14.0	0.0	1.4	1	1	0	1	1	1	0	ChrR	Cupin-like	domain
Cupin_6	PF12852.2	gi|557694178|ref|YP_008797232.1|	-	0.057	13.0	0.0	0.068	12.7	0.0	1.2	1	0	0	1	1	1	0	Cupin
Cupin_8	PF13621.1	gi|557694178|ref|YP_008797232.1|	-	0.063	12.7	0.0	0.063	12.7	0.0	1.2	1	0	0	1	1	1	0	Cupin-like	domain
JmjC	PF02373.17	gi|557694178|ref|YP_008797232.1|	-	0.14	12.4	0.0	0.21	11.8	0.0	1.3	1	0	0	1	1	1	0	JmjC	domain,	hydroxylase
HTH_27	PF13463.1	gi|557694180|ref|YP_008797234.1|	-	9.2e-08	32.2	0.0	1.8e-07	31.3	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|557694180|ref|YP_008797234.1|	-	7.1e-06	25.6	0.1	1.2e-05	24.9	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|557694180|ref|YP_008797234.1|	-	1.4e-05	24.6	0.0	2.3e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|557694180|ref|YP_008797234.1|	-	1.9e-05	24.1	0.3	3.8e-05	23.1	0.2	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|557694180|ref|YP_008797234.1|	-	6e-05	22.6	0.3	0.00015	21.3	0.1	1.7	2	0	0	2	2	2	1	MarR	family
HTH_45	PF14947.1	gi|557694180|ref|YP_008797234.1|	-	9.7e-05	22.1	0.0	0.00015	21.5	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
Rrf2	PF02082.15	gi|557694180|ref|YP_008797234.1|	-	0.00057	19.9	0.0	0.001	19.1	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_24	PF13412.1	gi|557694180|ref|YP_008797234.1|	-	0.0025	17.1	0.1	0.0044	16.3	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_12	PF08461.5	gi|557694180|ref|YP_008797234.1|	-	0.0095	15.6	0.3	0.023	14.3	0.2	1.7	1	1	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
Fe_dep_repress	PF01325.14	gi|557694180|ref|YP_008797234.1|	-	0.011	15.6	0.0	0.023	14.6	0.0	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
S10_plectin	PF03501.10	gi|557694180|ref|YP_008797234.1|	-	0.016	15.0	0.0	0.03	14.1	0.0	1.6	2	0	0	2	2	2	0	Plectin/S10	domain
GPP34	PF05719.6	gi|557694180|ref|YP_008797234.1|	-	0.028	14.4	0.3	0.036	14.1	0.2	1.2	1	0	0	1	1	1	0	Golgi	phosphoprotein	3	(GPP34)
FeoC	PF09012.5	gi|557694180|ref|YP_008797234.1|	-	0.032	13.9	0.0	0.053	13.2	0.0	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_Crp_2	PF13545.1	gi|557694180|ref|YP_008797234.1|	-	0.033	13.9	0.0	0.065	13.0	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
ANT	PF03374.9	gi|557694180|ref|YP_008797234.1|	-	0.039	14.0	0.1	0.081	12.9	0.0	1.6	1	1	1	2	2	2	0	Phage	antirepressor	protein	KilAC	domain
HTH_5	PF01022.15	gi|557694180|ref|YP_008797234.1|	-	0.042	13.5	0.3	0.063	12.9	0.2	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
TFIIE_alpha	PF02002.12	gi|557694180|ref|YP_008797234.1|	-	0.063	12.7	0.1	0.11	12.0	0.0	1.4	1	0	0	1	1	1	0	TFIIE	alpha	subunit
Penicillinase_R	PF03965.11	gi|557694180|ref|YP_008797234.1|	-	0.066	13.3	0.2	0.37	10.8	0.0	2.0	2	0	0	2	2	2	0	Penicillinase	repressor
HTH_20	PF12840.2	gi|557694180|ref|YP_008797234.1|	-	0.14	11.9	0.6	0.23	11.3	0.4	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
Transp_cyt_pur	PF02133.10	gi|557694181|ref|YP_008797235.1|	-	1.5e-27	96.2	37.4	1.8e-27	95.9	25.9	1.0	1	0	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
DNA_primase_lrg	PF04104.9	gi|557694182|ref|YP_008797236.1|	-	5.1e-25	88.2	0.2	1e-24	87.2	0.1	1.5	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
Methyltransf_26	PF13659.1	gi|557694183|ref|YP_008797237.1|	-	1.7e-14	53.8	0.0	7.8e-14	51.7	0.0	2.1	2	1	0	2	2	2	1	Methyltransferase	domain
Eco57I	PF07669.6	gi|557694183|ref|YP_008797237.1|	-	1.7e-07	31.5	0.0	4.8e-07	30.0	0.0	1.7	1	0	0	1	1	1	1	Eco57I	restriction-modification	methylase
N6_Mtase	PF02384.11	gi|557694183|ref|YP_008797237.1|	-	3e-07	29.8	0.0	0.084	11.9	0.0	3.2	3	0	0	3	3	3	2	N-6	DNA	Methylase
TaqI_C	PF12950.2	gi|557694183|ref|YP_008797237.1|	-	0.049	13.3	0.1	0.21	11.3	0.0	2.1	2	0	0	2	2	2	0	TaqI-like	C-terminal	specificity	domain
UPF0020	PF01170.13	gi|557694183|ref|YP_008797237.1|	-	0.067	12.7	0.0	2.7	7.5	0.0	2.4	2	0	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
SNF2_N	PF00176.18	gi|557694184|ref|YP_008797238.1|	-	2.2e-17	62.8	6.7	2.4e-09	36.4	0.3	3.1	2	1	1	3	3	3	2	SNF2	family	N-terminal	domain
PLDc_2	PF13091.1	gi|557694184|ref|YP_008797238.1|	-	3.1e-16	59.2	0.3	4e-15	55.6	0.0	2.9	3	0	0	3	3	3	1	PLD-like	domain
Helicase_C	PF00271.26	gi|557694184|ref|YP_008797238.1|	-	6.1e-13	48.4	0.1	2.4e-12	46.5	0.0	2.1	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|557694184|ref|YP_008797238.1|	-	6.4e-12	45.6	4.3	1.2e-05	25.2	0.1	3.6	2	2	1	3	3	3	2	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.1	gi|557694184|ref|YP_008797238.1|	-	3.4e-07	30.4	0.1	2.2e-06	27.8	0.0	2.5	1	0	0	1	1	1	1	AAA	domain
DEAD	PF00270.24	gi|557694184|ref|YP_008797238.1|	-	4.7e-06	26.1	0.4	0.0011	18.4	0.3	2.7	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_30	PF13604.1	gi|557694184|ref|YP_008797238.1|	-	0.00024	20.7	0.0	0.00058	19.4	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Flavi_DEAD	PF07652.9	gi|557694184|ref|YP_008797238.1|	-	0.0015	18.3	0.1	0.0052	16.5	0.1	1.9	1	1	0	1	1	1	1	Flavivirus	DEAD	domain
DUF2075	PF09848.4	gi|557694184|ref|YP_008797238.1|	-	0.0018	17.3	0.4	0.01	14.8	0.0	2.4	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
IstB_IS21	PF01695.12	gi|557694184|ref|YP_008797238.1|	-	0.0061	15.9	1.9	0.39	10.1	0.2	2.9	2	1	0	2	2	2	1	IstB-like	ATP	binding	protein
DUF4393	PF14337.1	gi|557694184|ref|YP_008797238.1|	-	0.02	14.3	0.2	0.02	14.3	0.1	3.3	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4393)
CbiA	PF01656.18	gi|557694184|ref|YP_008797238.1|	-	0.02	14.2	0.5	0.061	12.7	0.0	2.1	2	0	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA	PF00004.24	gi|557694184|ref|YP_008797238.1|	-	0.022	14.9	0.8	0.21	11.7	0.0	3.0	3	0	0	3	3	3	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_26	PF13500.1	gi|557694184|ref|YP_008797238.1|	-	0.07	12.7	0.2	0.84	9.2	0.2	2.7	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|557694184|ref|YP_008797238.1|	-	1.4	8.2	7.0	7.6	5.8	0.1	4.4	3	2	0	3	3	3	0	AAA-like	domain
DUF2096	PF09869.4	gi|557694185|ref|YP_008797239.1|	-	0.0074	16.1	0.0	0.015	15.1	0.0	1.5	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2096)
Cas_APE2256	PF09651.5	gi|557694186|ref|YP_008797240.1|	-	4.9e-30	104.0	0.4	1.1e-29	102.8	0.1	1.7	2	0	0	2	2	2	1	CRISPR-associated	protein	(Cas_APE2256)
DUF3734	PF12536.3	gi|557694186|ref|YP_008797240.1|	-	0.0044	17.1	1.0	0.21	11.7	0.1	2.4	1	1	1	2	2	2	2	Patatin	phospholipase
Rep_2	PF01719.12	gi|557694186|ref|YP_008797240.1|	-	0.0087	15.5	0.2	0.018	14.5	0.2	1.5	1	0	0	1	1	1	1	Plasmid	replication	protein
Cas_Cas02710	PF09670.5	gi|557694186|ref|YP_008797240.1|	-	0.011	14.3	0.0	0.021	13.4	0.0	1.5	1	1	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cas02710)
DUF1887	PF09002.6	gi|557694186|ref|YP_008797240.1|	-	0.018	13.4	0.0	0.026	12.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1887)
FliS	PF02561.9	gi|557694186|ref|YP_008797240.1|	-	0.02	14.7	0.5	0.035	13.9	0.3	1.4	1	0	0	1	1	1	0	Flagellar	protein	FliS
CompInhib_SCIN	PF11546.3	gi|557694186|ref|YP_008797240.1|	-	0.057	13.2	0.4	0.13	12.0	0.1	1.9	2	0	0	2	2	2	0	Staphylococcal	complement	inhibitor	SCIN
Band_7_1	PF13421.1	gi|557694186|ref|YP_008797240.1|	-	0.07	12.6	0.2	0.14	11.7	0.1	1.4	1	0	0	1	1	1	0	SPFH	domain-Band	7	family
Cellulase	PF00150.13	gi|557694189|ref|YP_008797243.1|	-	2.4e-10	40.0	0.0	1.7e-09	37.3	0.0	2.0	1	1	0	1	1	1	1	Cellulase	(glycosyl	hydrolase	family	5)
Cellulase-like	PF12876.2	gi|557694189|ref|YP_008797243.1|	-	0.00065	20.1	0.0	0.024	15.0	0.0	2.6	2	0	0	2	2	2	1	Sugar-binding	cellulase-like
Ssu72	PF04722.8	gi|557694189|ref|YP_008797243.1|	-	0.0096	15.2	0.7	0.96	8.7	0.3	2.4	2	0	0	2	2	2	1	Ssu72-like	protein
GAS	PF13851.1	gi|557694189|ref|YP_008797243.1|	-	0.013	14.7	8.8	0.022	13.9	6.1	1.3	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
TPR_12	PF13424.1	gi|557694189|ref|YP_008797243.1|	-	0.052	13.4	1.1	0.23	11.4	0.3	2.3	1	1	1	2	2	2	0	Tetratricopeptide	repeat
Spc24	PF08286.6	gi|557694189|ref|YP_008797243.1|	-	0.067	12.8	4.8	0.91	9.2	0.2	2.5	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
Syntaxin-6_N	PF09177.6	gi|557694189|ref|YP_008797243.1|	-	0.094	13.1	2.8	0.15	12.5	0.2	2.6	2	1	0	2	2	2	0	Syntaxin	6,	N-terminal
Myosin_tail_1	PF01576.14	gi|557694189|ref|YP_008797243.1|	-	0.1	10.3	11.1	0.15	9.7	7.7	1.1	1	0	0	1	1	1	0	Myosin	tail
APG6	PF04111.7	gi|557694189|ref|YP_008797243.1|	-	0.39	9.7	7.5	0.6	9.1	5.2	1.2	1	0	0	1	1	1	0	Autophagy	protein	Apg6
DUF848	PF05852.6	gi|557694189|ref|YP_008797243.1|	-	7.1	6.4	9.3	2.8	7.7	0.4	2.5	1	1	1	2	2	2	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
DUF559	PF04480.7	gi|557694190|ref|YP_008797244.1|	-	1.5e-12	47.1	0.3	2.9e-12	46.2	0.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF559)
DUF2726	PF10881.3	gi|557694190|ref|YP_008797244.1|	-	1.6e-05	24.4	1.1	4.2e-05	23.1	0.6	1.8	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2726)
BMC	PF00936.14	gi|557694190|ref|YP_008797244.1|	-	0.077	12.6	0.4	0.16	11.7	0.3	1.5	1	0	0	1	1	1	0	BMC	domain
DUF1627	PF07789.7	gi|557694192|ref|YP_008797246.1|	-	0.00068	19.2	0.0	0.0011	18.5	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1627)
UbiA	PF01040.13	gi|557694193|ref|YP_008797247.1|	-	9.3e-25	87.3	30.1	1.1e-24	87.0	20.9	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Amidohydro_4	PF13147.1	gi|557694194|ref|YP_008797248.1|	-	4.3e-33	115.5	0.1	6.5e-33	114.9	0.1	1.3	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|557694194|ref|YP_008797248.1|	-	2.8e-23	83.0	0.0	9e-23	81.4	0.0	1.7	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|557694194|ref|YP_008797248.1|	-	5.3e-15	55.0	0.5	3e-14	52.5	0.0	2.5	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|557694194|ref|YP_008797248.1|	-	3.1e-06	26.6	0.0	0.01	15.1	0.0	2.4	2	0	0	2	2	2	2	Amidohydrolase	family
Urease_alpha	PF00449.15	gi|557694194|ref|YP_008797248.1|	-	0.15	12.1	0.8	0.42	10.7	0.1	2.0	3	0	0	3	3	3	0	Urease	alpha-subunit,	N-terminal	domain
Ald_Xan_dh_C2	PF02738.13	gi|557694195|ref|YP_008797249.1|	-	6.3e-138	460.4	0.0	7.7e-138	460.1	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557694195|ref|YP_008797249.1|	-	3.9e-16	59.1	0.0	9.6e-16	57.8	0.0	1.7	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Ald_Xan_dh_C2	PF02738.13	gi|557694196|ref|YP_008797250.1|	-	8.1e-118	394.1	2.4	1.1e-117	393.6	1.7	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557694196|ref|YP_008797250.1|	-	1.5e-25	89.4	0.1	3.1e-25	88.4	0.0	1.6	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Iso_dh	PF00180.15	gi|557694197|ref|YP_008797251.1|	-	8.2e-90	301.2	0.0	9.6e-90	301.0	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
FAD_binding_2	PF00890.19	gi|557694198|ref|YP_008797252.1|	-	3.8e-106	355.4	0.6	4.6e-106	355.1	0.4	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|557694198|ref|YP_008797252.1|	-	4.1e-38	130.1	0.1	6.2e-38	129.5	0.1	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.9	gi|557694198|ref|YP_008797252.1|	-	1.9e-08	34.4	1.0	1.9e-05	24.6	0.3	3.2	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|557694198|ref|YP_008797252.1|	-	5.2e-05	22.2	0.6	0.00013	20.9	0.2	1.8	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.2	gi|557694198|ref|YP_008797252.1|	-	0.0014	17.7	4.1	0.036	13.1	2.7	2.5	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|557694198|ref|YP_008797252.1|	-	0.01	14.7	3.7	0.06	12.2	2.5	2.1	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|557694198|ref|YP_008797252.1|	-	0.069	12.1	0.7	0.12	11.4	0.5	1.3	1	0	0	1	1	1	0	FAD	binding	domain
HI0933_like	PF03486.9	gi|557694198|ref|YP_008797252.1|	-	0.081	11.3	3.7	0.15	10.4	0.6	2.4	3	0	0	3	3	3	0	HI0933-like	protein
Sdh_cyt	PF01127.17	gi|557694199|ref|YP_008797253.1|	-	3.2e-12	46.3	1.4	5.3e-12	45.6	1.0	1.4	1	1	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
Ni_hydr_CYTB	PF01292.15	gi|557694199|ref|YP_008797253.1|	-	0.015	14.6	3.3	0.79	9.0	0.4	2.2	2	0	0	2	2	2	0	Prokaryotic	cytochrome	b561
Ferric_reduct	PF01794.14	gi|557694199|ref|YP_008797253.1|	-	0.018	15.0	0.0	0.039	14.0	0.0	1.7	1	1	0	1	1	1	0	Ferric	reductase	like	transmembrane	component
Cytochrom_B_N	PF00033.14	gi|557694199|ref|YP_008797253.1|	-	0.25	10.6	5.9	1.8	7.8	0.1	2.3	2	1	0	2	2	2	0	Cytochrome	b(N-terminal)/b6/petB
OppC_N	PF12911.2	gi|557694199|ref|YP_008797253.1|	-	0.46	9.8	0.0	0.46	9.8	0.0	2.4	3	0	0	3	3	3	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
SdpI	PF13630.1	gi|557694199|ref|YP_008797253.1|	-	8.3	6.1	9.0	1.4	8.7	0.3	2.8	2	1	1	3	3	3	0	SdpI/YhfL	protein	family
Sdh_cyt	PF01127.17	gi|557694200|ref|YP_008797254.1|	-	3.8e-07	29.9	8.0	5.3e-07	29.4	5.5	1.2	1	0	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
Fer2_3	PF13085.1	gi|557694201|ref|YP_008797255.1|	-	8.8e-34	115.6	0.1	3e-33	113.9	0.0	1.8	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|557694201|ref|YP_008797255.1|	-	9.9e-10	38.3	3.3	1.5e-09	37.7	0.8	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|557694201|ref|YP_008797255.1|	-	1.1e-08	35.3	3.5	2.3e-07	31.1	0.0	2.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|557694201|ref|YP_008797255.1|	-	3.5e-08	33.6	1.0	3.5e-08	33.6	0.7	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|557694201|ref|YP_008797255.1|	-	2.1e-07	31.0	2.4	4.9e-07	29.9	0.5	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|557694201|ref|YP_008797255.1|	-	2.1e-07	31.2	14.5	1.9e-05	24.9	4.3	2.8	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|557694201|ref|YP_008797255.1|	-	1e-06	28.4	2.3	1e-06	28.4	1.6	2.6	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|557694201|ref|YP_008797255.1|	-	6.1e-05	22.4	2.1	6.1e-05	22.4	1.5	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|557694201|ref|YP_008797255.1|	-	0.00087	19.0	0.2	0.00087	19.0	0.2	2.9	4	0	0	4	4	4	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|557694201|ref|YP_008797255.1|	-	0.0016	18.2	1.5	0.0016	18.2	1.0	3.3	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer2	PF00111.22	gi|557694201|ref|YP_008797255.1|	-	0.002	17.8	0.8	0.0066	16.1	0.1	2.1	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_6	PF12837.2	gi|557694201|ref|YP_008797255.1|	-	0.0021	17.8	1.9	0.0021	17.8	1.3	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|557694201|ref|YP_008797255.1|	-	0.0039	17.4	0.7	0.0039	17.4	0.5	3.2	3	0	0	3	3	3	1	4Fe-4S	binding	domain
RdRP_1	PF00680.15	gi|557694201|ref|YP_008797255.1|	-	0.011	13.9	0.0	0.013	13.7	0.0	1.1	1	0	0	1	1	1	0	RNA	dependent	RNA	polymerase
Fer4_16	PF13484.1	gi|557694201|ref|YP_008797255.1|	-	0.022	15.5	6.6	0.022	15.5	4.6	2.7	2	1	1	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_20	PF14691.1	gi|557694201|ref|YP_008797255.1|	-	0.024	14.2	1.6	4.9	6.8	0.4	2.3	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_3	PF12798.2	gi|557694201|ref|YP_008797255.1|	-	0.15	12.7	0.8	0.15	12.7	0.5	3.1	3	0	0	3	3	2	0	4Fe-4S	binding	domain
CTP_transf_2	PF01467.21	gi|557694203|ref|YP_008797257.1|	-	2.8e-14	53.4	0.0	6.2e-14	52.3	0.0	1.5	1	1	0	1	1	1	1	Cytidylyltransferase
PG_binding_1	PF01471.13	gi|557694203|ref|YP_008797257.1|	-	0.077	12.9	0.0	0.14	12.1	0.0	1.4	1	0	0	1	1	1	0	Putative	peptidoglycan	binding	domain
Helicase_IV_N	PF12462.3	gi|557694204|ref|YP_008797258.1|	-	0.063	12.9	0.1	0.072	12.7	0.0	1.1	1	0	0	1	1	1	0	DNA	helicase	IV	/	RNA	helicase	N	terminal
Prominin	PF05478.6	gi|557694205|ref|YP_008797259.1|	-	0.00093	16.8	6.2	0.0013	16.4	4.3	1.2	1	0	0	1	1	1	1	Prominin
RHD3	PF05879.7	gi|557694205|ref|YP_008797259.1|	-	0.0057	14.6	6.0	0.0069	14.3	4.1	1.1	1	0	0	1	1	1	1	Root	hair	defective	3	GTP-binding	protein	(RHD3)
Caudo_TAP	PF02413.12	gi|557694205|ref|YP_008797259.1|	-	0.0076	16.4	2.8	0.0076	16.4	1.9	2.0	1	1	1	2	2	2	1	Caudovirales	tail	fibre	assembly	protein
DUF445	PF04286.7	gi|557694205|ref|YP_008797259.1|	-	0.019	14.5	10.7	0.026	14.0	7.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
DUF2580	PF10824.3	gi|557694205|ref|YP_008797259.1|	-	0.02	15.2	0.8	4	7.8	0.0	3.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2580)
Baculo_PEP_C	PF04513.7	gi|557694205|ref|YP_008797259.1|	-	0.024	14.4	8.1	1.2	9.0	1.9	2.3	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Gp-FAR-1	PF05823.7	gi|557694205|ref|YP_008797259.1|	-	0.034	14.1	12.6	0.054	13.4	3.1	2.3	1	1	1	2	2	2	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
CAP18_C	PF12153.3	gi|557694205|ref|YP_008797259.1|	-	0.053	13.1	1.3	6.7	6.4	0.2	3.4	3	0	0	3	3	3	0	LPS	binding	domain	of	CAP18	(C	terminal)
Taeniidae_ag	PF05596.6	gi|557694205|ref|YP_008797259.1|	-	0.067	13.0	8.8	0.2	11.5	0.7	3.0	3	1	1	4	4	3	0	Taeniidae	antigen
Asp23	PF03780.8	gi|557694205|ref|YP_008797259.1|	-	0.081	13.2	3.1	0.89	9.8	0.3	2.5	2	1	0	2	2	2	0	Asp23	family
Exonuc_VII_L	PF02601.10	gi|557694205|ref|YP_008797259.1|	-	0.092	11.9	8.4	0.11	11.7	5.8	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
ISG65-75	PF11727.3	gi|557694205|ref|YP_008797259.1|	-	0.094	11.7	12.0	0.3	10.1	8.4	1.9	1	1	0	1	1	1	0	Invariant	surface	glycoprotein
ArsR	PF09824.4	gi|557694205|ref|YP_008797259.1|	-	0.14	11.4	2.9	0.79	9.0	0.7	2.2	1	1	1	2	2	2	0	ArsR	transcriptional	regulator
Apolipoprotein	PF01442.13	gi|557694205|ref|YP_008797259.1|	-	0.16	11.4	18.2	0.16	11.4	2.8	2.0	1	1	1	2	2	2	0	Apolipoprotein	A1/A4/E	domain
Lipoprotein_6	PF01441.14	gi|557694205|ref|YP_008797259.1|	-	0.17	11.7	11.5	0.71	9.6	1.0	2.3	1	1	1	2	2	2	0	Lipoprotein
DUF948	PF06103.6	gi|557694205|ref|YP_008797259.1|	-	0.2	11.5	6.7	0.06	13.2	1.2	2.4	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Atg14	PF10186.4	gi|557694205|ref|YP_008797259.1|	-	0.45	9.4	13.2	0.65	8.8	9.1	1.2	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Arch_flagellin	PF01917.11	gi|557694205|ref|YP_008797259.1|	-	0.52	9.8	5.7	10	5.6	1.9	2.4	2	0	0	2	2	2	0	Archaebacterial	flagellin
Mnd1	PF03962.10	gi|557694205|ref|YP_008797259.1|	-	0.57	9.8	13.4	0.62	9.6	8.3	1.7	1	1	0	1	1	1	0	Mnd1	family
Ada3	PF10198.4	gi|557694205|ref|YP_008797259.1|	-	0.61	9.8	10.5	1.6	8.4	7.2	1.8	1	1	0	1	1	1	0	Histone	acetyltransferases	subunit	3
DUF883	PF05957.8	gi|557694205|ref|YP_008797259.1|	-	0.71	10.3	13.6	0.12	12.7	2.7	2.7	2	1	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
Retrotrans_gag	PF03732.12	gi|557694205|ref|YP_008797259.1|	-	0.72	9.9	7.4	7.9	6.6	0.1	2.9	1	1	2	3	3	3	0	Retrotransposon	gag	protein
MADF_DNA_bdg	PF10545.4	gi|557694205|ref|YP_008797259.1|	-	0.95	9.6	3.8	3.1	8.0	0.2	2.4	1	1	0	2	2	2	0	Alcohol	dehydrogenase	transcription	factor	Myb/SANT-like
RE_TdeIII	PF09520.5	gi|557694205|ref|YP_008797259.1|	-	1.1	8.4	8.9	0.23	10.7	1.9	2.0	1	1	1	2	2	2	0	Type	II	restriction	endonuclease,	TdeIII
SDH_alpha	PF03313.10	gi|557694205|ref|YP_008797259.1|	-	1.1	8.1	8.5	0.15	11.0	1.8	1.9	1	1	1	2	2	2	0	Serine	dehydratase	alpha	chain
TMF_DNA_bd	PF12329.3	gi|557694205|ref|YP_008797259.1|	-	1.2	8.9	20.0	0.79	9.5	7.8	2.8	1	1	2	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
FUSC	PF04632.7	gi|557694205|ref|YP_008797259.1|	-	1.2	7.4	3.9	1.9	6.8	2.7	1.3	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
Spore_II_R	PF09551.5	gi|557694205|ref|YP_008797259.1|	-	1.4	8.9	9.4	0.23	11.4	1.1	2.3	1	1	1	2	2	2	0	Stage	II	sporulation	protein	R	(spore_II_R)
FlgM	PF04316.8	gi|557694205|ref|YP_008797259.1|	-	1.6	8.7	9.1	5	7.1	0.5	2.7	2	0	0	2	2	2	0	Anti-sigma-28	factor,	FlgM
Carbpep_Y_N	PF05388.6	gi|557694205|ref|YP_008797259.1|	-	1.7	8.8	6.3	2.2e+02	2.0	4.4	2.3	1	1	0	1	1	1	0	Carboxypeptidase	Y	pro-peptide
Activator-TraM	PF11657.3	gi|557694205|ref|YP_008797259.1|	-	1.7	8.0	10.3	2.3	7.7	5.3	2.1	1	1	1	2	2	2	0	Transcriptional	activator	TraM
Rootletin	PF15035.1	gi|557694205|ref|YP_008797259.1|	-	2.2	8.1	17.6	0.93	9.4	1.8	2.1	1	1	1	2	2	2	0	Ciliary	rootlet	component,	centrosome	cohesion
GvpG	PF05120.7	gi|557694205|ref|YP_008797259.1|	-	2.7	7.8	11.0	0.18	11.6	1.9	2.8	1	1	0	2	2	2	0	Gas	vesicle	protein	G
AF0941-like	PF14591.1	gi|557694205|ref|YP_008797259.1|	-	2.9	7.9	16.2	15	5.6	11.3	2.2	1	1	0	1	1	1	0	AF0941-like
YtxH	PF12732.2	gi|557694205|ref|YP_008797259.1|	-	3.2	8.1	9.2	1.5	9.2	2.4	2.7	2	1	0	2	2	2	0	YtxH-like	protein
Spc7	PF08317.6	gi|557694205|ref|YP_008797259.1|	-	3.4	6.2	18.4	6.8	5.2	4.0	1.9	1	1	0	1	1	1	0	Spc7	kinetochore	protein
Hormone_1	PF00103.15	gi|557694205|ref|YP_008797259.1|	-	4.1	6.7	7.7	1.8	7.8	0.6	2.2	1	1	1	2	2	2	0	Somatotropin	hormone	family
HisKA_3	PF07730.8	gi|557694205|ref|YP_008797259.1|	-	4.3	7.7	11.8	0.28	11.5	0.2	3.2	2	1	1	3	3	3	0	Histidine	kinase
Syntaxin	PF00804.20	gi|557694205|ref|YP_008797259.1|	-	4.5	7.5	15.1	8.9e+02	0.1	10.5	2.7	1	1	0	1	1	1	0	Syntaxin
TMPIT	PF07851.8	gi|557694205|ref|YP_008797259.1|	-	4.7	6.1	11.5	5.9	5.8	3.0	2.0	1	1	1	2	2	2	0	TMPIT-like	protein
IZUMO	PF15005.1	gi|557694205|ref|YP_008797259.1|	-	4.9	7.1	9.6	5.1	7.1	4.2	2.0	1	1	1	2	2	2	0	Izumo	sperm-egg	fusion
Fib_alpha	PF08702.5	gi|557694205|ref|YP_008797259.1|	-	6.6	6.8	9.4	16	5.6	6.3	1.8	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Cauli_AT	PF03233.8	gi|557694205|ref|YP_008797259.1|	-	6.9	6.3	11.3	8.2	6.1	2.4	2.3	1	1	1	2	2	2	0	Aphid	transmission	protein
MIF4G_like_2	PF09090.6	gi|557694205|ref|YP_008797259.1|	-	7	5.7	11.3	11	5.1	7.7	1.4	1	1	0	1	1	1	0	MIF4G	like
AAA_32	PF13654.1	gi|557694205|ref|YP_008797259.1|	-	8.5	4.9	16.0	14	4.1	10.8	1.5	1	1	1	2	2	2	0	AAA	domain
MarR_2	PF12802.2	gi|557694206|ref|YP_008797260.1|	-	6.7e-09	35.2	0.4	1.6e-08	34.0	0.2	1.6	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|557694206|ref|YP_008797260.1|	-	7.4e-09	35.0	0.1	1.5e-08	34.1	0.1	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|557694206|ref|YP_008797260.1|	-	1.5e-06	27.4	0.0	2.4e-06	26.7	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|557694206|ref|YP_008797260.1|	-	2.3e-06	27.2	0.0	5.2e-06	26.0	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|557694206|ref|YP_008797260.1|	-	4e-06	26.4	0.0	7.8e-06	25.4	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|557694206|ref|YP_008797260.1|	-	2e-05	24.2	0.3	4.2e-05	23.1	0.2	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|557694206|ref|YP_008797260.1|	-	5.1e-05	22.9	0.2	9.7e-05	22.1	0.2	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|557694206|ref|YP_008797260.1|	-	0.00019	21.4	0.4	0.00038	20.5	0.3	1.4	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_28	PF13518.1	gi|557694206|ref|YP_008797260.1|	-	0.00021	21.1	0.0	0.0005	20.0	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|557694206|ref|YP_008797260.1|	-	0.00037	20.0	0.1	0.00078	19.0	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_Crp_2	PF13545.1	gi|557694206|ref|YP_008797260.1|	-	0.00053	19.7	0.0	0.0011	18.7	0.0	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|557694206|ref|YP_008797260.1|	-	0.00093	18.4	0.2	0.002	17.4	0.1	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_38	PF13936.1	gi|557694206|ref|YP_008797260.1|	-	0.0032	16.9	0.0	0.0057	16.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|557694206|ref|YP_008797260.1|	-	0.0033	17.0	0.0	0.0061	16.1	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
CENP-B_N	PF04218.8	gi|557694206|ref|YP_008797260.1|	-	0.0063	15.9	0.0	0.011	15.1	0.0	1.4	1	0	0	1	1	1	1	CENP-B	N-terminal	DNA-binding	domain
HTH_8	PF02954.14	gi|557694206|ref|YP_008797260.1|	-	0.0072	15.8	0.0	0.018	14.5	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	Fis	family
HTH_29	PF13551.1	gi|557694206|ref|YP_008797260.1|	-	0.0077	16.3	0.2	0.017	15.2	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn	helix
FeoC	PF09012.5	gi|557694206|ref|YP_008797260.1|	-	0.009	15.7	0.1	0.018	14.7	0.1	1.4	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
Sigma70_r4_2	PF08281.7	gi|557694206|ref|YP_008797260.1|	-	0.01	15.2	0.0	0.017	14.5	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
Crp	PF00325.15	gi|557694206|ref|YP_008797260.1|	-	0.011	15.2	1.0	0.041	13.3	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	crp	family
Fe_dep_repress	PF01325.14	gi|557694206|ref|YP_008797260.1|	-	0.025	14.5	0.3	0.052	13.5	0.2	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
KorB	PF08535.5	gi|557694206|ref|YP_008797260.1|	-	0.029	14.5	0.0	0.058	13.5	0.0	1.5	1	0	0	1	1	1	0	KorB	domain
GntR	PF00392.16	gi|557694206|ref|YP_008797260.1|	-	0.031	13.7	1.7	0.1	12.0	0.6	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_7	PF02796.10	gi|557694206|ref|YP_008797260.1|	-	0.033	14.0	0.0	0.084	12.7	0.0	1.8	2	0	0	2	2	1	0	Helix-turn-helix	domain	of	resolvase
Rrf2	PF02082.15	gi|557694206|ref|YP_008797260.1|	-	0.036	14.1	0.1	0.087	12.9	0.0	1.6	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_36	PF13730.1	gi|557694206|ref|YP_008797260.1|	-	0.075	13.1	0.0	0.15	12.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|557694206|ref|YP_008797260.1|	-	0.094	13.0	0.1	0.18	12.1	0.1	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_AsnC-type	PF13404.1	gi|557694206|ref|YP_008797260.1|	-	0.11	12.0	0.1	0.72	9.4	0.0	2.3	2	1	1	3	3	3	0	AsnC-type	helix-turn-helix	domain
Phage_terminase	PF10668.4	gi|557694206|ref|YP_008797260.1|	-	0.12	12.2	0.0	0.21	11.3	0.0	1.3	1	0	0	1	1	1	0	Phage	terminase	small	subunit
Actin	PF00022.14	gi|557694207|ref|YP_008797261.1|	-	2e-18	65.9	0.0	4e-18	65.0	0.0	1.4	1	0	0	1	1	1	1	Actin
Cupin_4	PF08007.7	gi|557694208|ref|YP_008797262.1|	-	0.11	11.7	0.1	0.14	11.3	0.0	1.2	1	0	0	1	1	1	0	Cupin	superfamily	protein
MS_channel	PF00924.13	gi|557694209|ref|YP_008797263.1|	-	1.7e-31	109.1	0.4	2.9e-31	108.4	0.3	1.3	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
SseB_C	PF14581.1	gi|557694209|ref|YP_008797263.1|	-	0.035	13.9	0.1	0.053	13.3	0.1	1.2	1	0	0	1	1	1	0	SseB	protein	C-terminal	domain
VIT1	PF01988.14	gi|557694210|ref|YP_008797264.1|	-	2.2e-19	69.8	18.0	4.3e-17	62.3	12.5	2.0	1	1	0	1	1	1	1	VIT	family
DUF4118	PF13493.1	gi|557694210|ref|YP_008797264.1|	-	0.0073	16.4	4.0	0.0073	16.4	2.8	2.4	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4118)
IF-2B	PF01008.12	gi|557694211|ref|YP_008797265.1|	-	7.7e-85	284.2	0.1	8.9e-85	284.0	0.0	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
Pyr_redox_2	PF07992.9	gi|557694212|ref|YP_008797266.1|	-	1.7e-14	54.2	0.0	3.3e-14	53.2	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|557694212|ref|YP_008797266.1|	-	1.2e-09	37.6	0.1	0.00074	18.5	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|557694212|ref|YP_008797266.1|	-	1.2e-05	25.5	0.1	0.046	14.1	0.0	2.8	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|557694212|ref|YP_008797266.1|	-	2.7e-05	24.1	0.0	8.8e-05	22.4	0.0	1.9	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|557694212|ref|YP_008797266.1|	-	0.0015	17.4	0.0	0.01	14.7	0.0	2.1	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_9	PF13454.1	gi|557694212|ref|YP_008797266.1|	-	0.0019	18.0	0.2	0.52	10.0	0.0	2.5	2	0	0	2	2	2	2	FAD-NAD(P)-binding
Pyr_redox_3	PF13738.1	gi|557694212|ref|YP_008797266.1|	-	0.036	14.1	0.0	0.49	10.4	0.0	2.4	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|557694212|ref|YP_008797266.1|	-	0.19	10.2	0.0	0.28	9.7	0.0	1.2	1	0	0	1	1	1	0	Tryptophan	halogenase
Aconitase	PF00330.15	gi|557694213|ref|YP_008797267.1|	-	3e-138	461.1	0.0	1.8e-137	458.5	0.0	1.9	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|557694213|ref|YP_008797267.1|	-	1.2e-41	141.8	0.0	2e-41	141.1	0.0	1.3	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Reprolysin_4	PF13583.1	gi|557694214|ref|YP_008797268.1|	-	2.9e-05	23.6	0.3	0.00024	20.7	0.1	2.1	2	0	0	2	2	2	1	Metallo-peptidase	family	M12B	Reprolysin-like
IncA	PF04156.9	gi|557694214|ref|YP_008797268.1|	-	3e-05	23.6	2.3	7.7e-05	22.3	1.6	1.7	1	0	0	1	1	1	1	IncA	protein
CENP-F_leu_zip	PF10473.4	gi|557694214|ref|YP_008797268.1|	-	5.3e-05	23.0	12.8	9.5e-05	22.2	8.9	1.3	1	0	0	1	1	1	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Spc7	PF08317.6	gi|557694214|ref|YP_008797268.1|	-	0.00024	19.9	1.4	0.00049	18.8	0.9	1.4	1	0	0	1	1	1	1	Spc7	kinetochore	protein
Reprolysin_5	PF13688.1	gi|557694214|ref|YP_008797268.1|	-	0.00034	20.6	0.0	0.00091	19.2	0.0	1.7	2	0	0	2	2	1	1	Metallo-peptidase	family	M12
CCDC-167	PF15188.1	gi|557694214|ref|YP_008797268.1|	-	0.00034	20.4	2.5	0.00034	20.4	1.7	2.6	2	1	1	3	3	2	1	Coiled-coil	domain-containing	protein	167
Atg14	PF10186.4	gi|557694214|ref|YP_008797268.1|	-	0.00036	19.5	1.9	0.00065	18.7	1.3	1.3	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Reprolysin_2	PF13574.1	gi|557694214|ref|YP_008797268.1|	-	0.00043	20.3	0.3	0.00095	19.2	0.1	1.6	2	0	0	2	2	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
TMCO5	PF14992.1	gi|557694214|ref|YP_008797268.1|	-	0.0006	19.0	2.8	0.0011	18.2	1.9	1.3	1	0	0	1	1	1	1	TMCO5	family
DUF2730	PF10805.3	gi|557694214|ref|YP_008797268.1|	-	0.00062	19.4	2.5	0.0028	17.3	1.0	2.3	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2730)
Tropomyosin_1	PF12718.2	gi|557694214|ref|YP_008797268.1|	-	0.0018	18.1	14.8	0.0055	16.5	10.5	1.6	1	1	1	2	2	2	1	Tropomyosin	like
Filament	PF00038.16	gi|557694214|ref|YP_008797268.1|	-	0.0026	17.2	7.7	0.0048	16.4	5.3	1.4	1	0	0	1	1	1	1	Intermediate	filament	protein
AAA_13	PF13166.1	gi|557694214|ref|YP_008797268.1|	-	0.0028	16.2	2.3	0.0043	15.5	1.6	1.2	1	0	0	1	1	1	1	AAA	domain
Reprolysin_3	PF13582.1	gi|557694214|ref|YP_008797268.1|	-	0.0031	18.0	0.0	0.0096	16.4	0.0	1.8	2	0	0	2	2	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
ATG16	PF08614.6	gi|557694214|ref|YP_008797268.1|	-	0.0048	16.7	5.7	0.01	15.6	4.0	1.5	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
DUF869	PF05911.6	gi|557694214|ref|YP_008797268.1|	-	0.005	15.1	3.3	0.0065	14.7	2.3	1.1	1	0	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
APG6	PF04111.7	gi|557694214|ref|YP_008797268.1|	-	0.0053	15.8	4.4	0.0093	15.0	3.1	1.4	1	0	0	1	1	1	1	Autophagy	protein	Apg6
TPR_MLP1_2	PF07926.7	gi|557694214|ref|YP_008797268.1|	-	0.014	15.1	13.5	0.1	12.3	3.8	2.4	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
DUF4407	PF14362.1	gi|557694214|ref|YP_008797268.1|	-	0.034	13.1	3.4	0.055	12.4	2.3	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
WEMBL	PF05701.6	gi|557694214|ref|YP_008797268.1|	-	0.04	12.3	12.2	0.066	11.6	8.4	1.2	1	0	0	1	1	1	0	Weak	chloroplast	movement	under	blue	light
TMF_TATA_bd	PF12325.3	gi|557694214|ref|YP_008797268.1|	-	0.046	13.4	13.1	0.45	10.2	4.5	2.4	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
DUF3584	PF12128.3	gi|557694214|ref|YP_008797268.1|	-	0.064	10.5	10.4	0.09	10.0	7.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
LPP	PF04728.8	gi|557694214|ref|YP_008797268.1|	-	0.064	13.0	0.0	0.51	10.1	0.1	2.3	2	0	0	2	2	2	0	Lipoprotein	leucine-zipper
TMPIT	PF07851.8	gi|557694214|ref|YP_008797268.1|	-	0.065	12.2	0.1	0.12	11.4	0.1	1.4	1	0	0	1	1	1	0	TMPIT-like	protein
Peptidase_M57	PF12388.3	gi|557694214|ref|YP_008797268.1|	-	0.077	12.3	0.1	0.39	10.0	0.1	2.0	2	0	0	2	2	2	0	Dual-action	HEIGH	metallo-peptidase
DUF342	PF03961.8	gi|557694214|ref|YP_008797268.1|	-	0.08	11.3	0.9	0.14	10.5	0.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
MAD	PF05557.8	gi|557694214|ref|YP_008797268.1|	-	0.083	10.9	6.9	0.13	10.3	4.8	1.2	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
zf-C4H2	PF10146.4	gi|557694214|ref|YP_008797268.1|	-	0.086	12.8	5.1	0.18	11.8	3.5	1.5	1	0	0	1	1	1	0	Zinc	finger-containing	protein
Peptidase_M66	PF10462.4	gi|557694214|ref|YP_008797268.1|	-	0.1	11.4	0.9	0.16	10.7	0.7	1.2	1	0	0	1	1	1	0	Peptidase	M66
PEARLI-4	PF05278.7	gi|557694214|ref|YP_008797268.1|	-	0.1	11.9	3.9	0.23	10.8	2.7	1.5	1	0	0	1	1	1	0	Arabidopsis	phospholipase-like	protein	(PEARLI	4)
IFT57	PF10498.4	gi|557694214|ref|YP_008797268.1|	-	0.11	11.2	4.0	0.19	10.4	2.7	1.3	1	0	0	1	1	1	0	Intra-flagellar	transport	protein	57
DUF1664	PF07889.7	gi|557694214|ref|YP_008797268.1|	-	0.12	12.2	3.5	0.45	10.3	2.4	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Mod_r	PF07200.8	gi|557694214|ref|YP_008797268.1|	-	0.12	12.2	6.9	0.25	11.2	4.3	1.7	1	1	0	1	1	1	0	Modifier	of	rudimentary	(Mod(r))	protein
RmuC	PF02646.11	gi|557694214|ref|YP_008797268.1|	-	0.13	11.0	4.7	0.15	10.8	0.5	2.2	1	1	1	2	2	2	0	RmuC	family
Peptidase_M10	PF00413.19	gi|557694214|ref|YP_008797268.1|	-	0.18	11.5	0.7	0.43	10.2	0.1	1.8	2	0	0	2	2	1	0	Matrixin
Reo_sigmaC	PF04582.7	gi|557694214|ref|YP_008797268.1|	-	0.23	10.6	0.1	0.42	9.7	0.1	1.4	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
DUF4398	PF14346.1	gi|557694214|ref|YP_008797268.1|	-	0.26	11.3	10.6	0.43	10.6	7.3	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
TMF_DNA_bd	PF12329.3	gi|557694214|ref|YP_008797268.1|	-	0.27	11.0	14.7	0.9	9.3	4.8	2.4	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
V_ATPase_I	PF01496.14	gi|557694214|ref|YP_008797268.1|	-	0.27	9.0	4.4	0.53	8.0	3.0	1.4	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Seryl_tRNA_N	PF02403.17	gi|557694214|ref|YP_008797268.1|	-	0.28	11.1	10.2	2.9	7.9	3.5	2.4	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
FUSC	PF04632.7	gi|557694214|ref|YP_008797268.1|	-	0.29	9.4	4.7	0.44	8.9	3.2	1.1	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
AKNA	PF12443.3	gi|557694214|ref|YP_008797268.1|	-	0.3	11.1	1.5	6.4	6.8	0.8	2.2	1	1	1	2	2	2	0	AT-hook-containing	transcription	factor
GRA6	PF05084.8	gi|557694214|ref|YP_008797268.1|	-	0.41	10.1	5.6	0.87	9.0	3.5	1.7	2	0	0	2	2	1	0	Granule	antigen	protein	(GRA6)
GAS	PF13851.1	gi|557694214|ref|YP_008797268.1|	-	0.43	9.7	14.6	0.069	12.3	6.2	2.0	2	0	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
DivIVA	PF05103.8	gi|557694214|ref|YP_008797268.1|	-	0.54	10.3	10.4	1.1	9.2	7.2	1.5	1	0	0	1	1	1	0	DivIVA	protein
FlaC_arch	PF05377.6	gi|557694214|ref|YP_008797268.1|	-	0.54	10.1	7.2	0.7	9.8	0.2	3.3	2	1	1	3	3	2	0	Flagella	accessory	protein	C	(FlaC)
AAA_27	PF13514.1	gi|557694214|ref|YP_008797268.1|	-	0.56	7.8	14.2	1.1	6.7	9.8	1.4	1	1	0	1	1	1	0	AAA	domain
HAUS5	PF14817.1	gi|557694214|ref|YP_008797268.1|	-	0.71	8.3	7.9	0.83	8.1	4.9	1.4	2	0	0	2	2	1	0	HAUS	augmin-like	complex	subunit	5
BTV_NS2	PF04514.7	gi|557694214|ref|YP_008797268.1|	-	0.82	8.4	4.4	1.3	7.8	3.0	1.2	1	0	0	1	1	1	0	Bluetongue	virus	non-structural	protein	NS2
Tropomyosin	PF00261.15	gi|557694214|ref|YP_008797268.1|	-	0.82	8.7	16.7	2.1	7.3	11.0	1.6	1	1	0	1	1	1	0	Tropomyosin
V-SNARE	PF05008.10	gi|557694214|ref|YP_008797268.1|	-	0.86	9.8	9.8	2.6	8.2	6.7	2.0	1	1	0	1	1	1	0	Vesicle	transport	v-SNARE	protein	N-terminus
Vps5	PF09325.5	gi|557694214|ref|YP_008797268.1|	-	0.87	8.7	7.9	0.88	8.7	2.5	2.2	1	1	1	2	2	2	0	Vps5	C	terminal	like
Fzo_mitofusin	PF04799.8	gi|557694214|ref|YP_008797268.1|	-	0.99	8.7	3.2	3.6	6.9	1.9	2.0	1	1	0	1	1	1	0	fzo-like	conserved	region
XhlA	PF10779.4	gi|557694214|ref|YP_008797268.1|	-	1.5	8.7	5.2	0.89	9.5	0.1	2.4	1	1	1	2	2	2	0	Haemolysin	XhlA
Phage_GP20	PF06810.6	gi|557694214|ref|YP_008797268.1|	-	1.7	8.0	4.9	4	6.8	3.4	1.5	1	1	0	1	1	1	0	Phage	minor	structural	protein	GP20
Laminin_II	PF06009.7	gi|557694214|ref|YP_008797268.1|	-	1.8	8.3	8.5	0.25	11.0	3.1	1.6	2	0	0	2	2	1	0	Laminin	Domain	II
NPV_P10	PF05531.7	gi|557694214|ref|YP_008797268.1|	-	2.1	8.6	6.9	0.28	11.4	0.9	2.4	2	1	1	3	3	1	0	Nucleopolyhedrovirus	P10	protein
DUF4618	PF15397.1	gi|557694214|ref|YP_008797268.1|	-	2.3	7.5	10.7	5.6	6.2	2.0	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4618)
ADIP	PF11559.3	gi|557694214|ref|YP_008797268.1|	-	2.6	7.9	17.2	0.15	11.9	6.6	2.5	2	1	1	3	3	2	0	Afadin-	and	alpha	-actinin-Binding
Prefoldin_2	PF01920.15	gi|557694214|ref|YP_008797268.1|	-	2.8	7.7	12.2	11	5.7	0.0	3.5	2	1	2	4	4	3	0	Prefoldin	subunit
CP12	PF02672.10	gi|557694214|ref|YP_008797268.1|	-	4	7.9	6.9	6.8	7.2	4.2	1.8	1	1	1	2	2	1	0	CP12	domain
COG2	PF06148.6	gi|557694214|ref|YP_008797268.1|	-	5	6.9	6.9	53	3.6	4.4	2.5	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF641	PF04859.7	gi|557694214|ref|YP_008797268.1|	-	5.8	6.6	9.5	7.1	6.3	0.5	2.4	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
DivIC	PF04977.10	gi|557694214|ref|YP_008797268.1|	-	6.2	6.3	13.9	3.6	7.1	1.6	3.3	1	1	2	3	3	3	0	Septum	formation	initiator
TBPIP	PF07106.8	gi|557694214|ref|YP_008797268.1|	-	6.3	6.3	10.8	2.2	7.8	2.5	2.3	2	1	1	3	3	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Mnd1	PF03962.10	gi|557694214|ref|YP_008797268.1|	-	7.2	6.2	12.4	6.4	6.3	7.0	2.1	2	1	0	2	2	1	0	Mnd1	family
DUF4200	PF13863.1	gi|557694214|ref|YP_008797268.1|	-	7.9	6.4	14.2	47	3.9	9.9	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
Fmp27_WPPW	PF10359.4	gi|557694214|ref|YP_008797268.1|	-	9.2	4.5	8.8	12	4.1	3.8	2.1	2	0	0	2	2	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
Reprolysin_4	PF13583.1	gi|557694215|ref|YP_008797269.1|	-	7.3e-06	25.6	0.1	1.7e-05	24.4	0.1	1.5	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
GAS	PF13851.1	gi|557694215|ref|YP_008797269.1|	-	4.2e-05	22.8	16.3	0.00022	20.5	10.5	2.1	2	0	0	2	2	2	1	Growth-arrest	specific	micro-tubule	binding
TMPIT	PF07851.8	gi|557694215|ref|YP_008797269.1|	-	0.00011	21.4	3.9	0.00015	20.9	2.7	1.2	1	0	0	1	1	1	1	TMPIT-like	protein
Reprolysin_5	PF13688.1	gi|557694215|ref|YP_008797269.1|	-	0.00011	22.2	1.0	0.00034	20.6	0.0	2.0	2	0	0	2	2	2	1	Metallo-peptidase	family	M12
Reprolysin_2	PF13574.1	gi|557694215|ref|YP_008797269.1|	-	0.00024	21.1	0.0	0.00054	20.0	0.0	1.5	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
CCDC-167	PF15188.1	gi|557694215|ref|YP_008797269.1|	-	0.00052	19.8	2.8	0.00052	19.8	2.0	2.6	3	0	0	3	3	2	1	Coiled-coil	domain-containing	protein	167
AAA_27	PF13514.1	gi|557694215|ref|YP_008797269.1|	-	0.003	15.3	11.8	0.0043	14.8	8.2	1.1	1	0	0	1	1	1	1	AAA	domain
Reprolysin_3	PF13582.1	gi|557694215|ref|YP_008797269.1|	-	0.0032	17.9	0.0	0.008	16.6	0.0	1.7	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Fib_alpha	PF08702.5	gi|557694215|ref|YP_008797269.1|	-	0.0037	17.3	12.8	0.0081	16.2	8.9	1.5	1	0	0	1	1	1	1	Fibrinogen	alpha/beta	chain	family
Reprolysin	PF01421.14	gi|557694215|ref|YP_008797269.1|	-	0.0037	16.8	0.0	0.0083	15.7	0.0	1.5	1	0	0	1	1	1	1	Reprolysin	(M12B)	family	zinc	metalloprotease
Laminin_II	PF06009.7	gi|557694215|ref|YP_008797269.1|	-	0.0038	16.9	10.6	0.0069	16.1	7.4	1.3	1	0	0	1	1	1	1	Laminin	Domain	II
AAA_13	PF13166.1	gi|557694215|ref|YP_008797269.1|	-	0.0059	15.1	3.8	0.01	14.3	2.6	1.4	1	0	0	1	1	1	1	AAA	domain
Peptidase_M10	PF00413.19	gi|557694215|ref|YP_008797269.1|	-	0.0077	15.9	0.1	0.02	14.5	0.0	1.7	1	0	0	1	1	1	1	Matrixin
DUF342	PF03961.8	gi|557694215|ref|YP_008797269.1|	-	0.0078	14.6	6.4	0.012	14.0	4.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
Filament	PF00038.16	gi|557694215|ref|YP_008797269.1|	-	0.0082	15.6	12.5	0.015	14.7	8.6	1.4	1	0	0	1	1	1	1	Intermediate	filament	protein
DUF812	PF05667.6	gi|557694215|ref|YP_008797269.1|	-	0.0099	14.4	6.1	0.013	14.0	4.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF812)
Atg14	PF10186.4	gi|557694215|ref|YP_008797269.1|	-	0.011	14.6	14.3	0.019	13.9	9.9	1.3	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
APG6	PF04111.7	gi|557694215|ref|YP_008797269.1|	-	0.012	14.6	14.0	0.022	13.7	9.7	1.4	1	0	0	1	1	1	0	Autophagy	protein	Apg6
CorA	PF01544.13	gi|557694215|ref|YP_008797269.1|	-	0.014	14.4	8.4	0.026	13.5	5.8	1.3	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
WEMBL	PF05701.6	gi|557694215|ref|YP_008797269.1|	-	0.015	13.8	15.4	0.029	12.8	10.7	1.3	1	0	0	1	1	1	0	Weak	chloroplast	movement	under	blue	light
HOOK	PF05622.7	gi|557694215|ref|YP_008797269.1|	-	0.021	12.6	11.4	0.031	12.1	7.9	1.1	1	0	0	1	1	1	0	HOOK	protein
Spc7	PF08317.6	gi|557694215|ref|YP_008797269.1|	-	0.023	13.3	18.3	0.19	10.3	11.8	2.1	1	1	1	2	2	2	0	Spc7	kinetochore	protein
Astacin	PF01400.19	gi|557694215|ref|YP_008797269.1|	-	0.032	13.6	0.1	0.056	12.8	0.0	1.3	1	0	0	1	1	1	0	Astacin	(Peptidase	family	M12A)
Peptidase_M54	PF07998.6	gi|557694215|ref|YP_008797269.1|	-	0.039	13.7	0.1	0.14	11.9	0.0	1.9	2	0	0	2	2	1	0	Peptidase	family	M54
Peptidase_M8	PF01457.11	gi|557694215|ref|YP_008797269.1|	-	0.05	11.9	0.0	0.082	11.2	0.0	1.2	1	0	0	1	1	1	0	Leishmanolysin
Peptidase_M57	PF12388.3	gi|557694215|ref|YP_008797269.1|	-	0.052	12.8	0.1	0.13	11.6	0.0	1.6	1	0	0	1	1	1	0	Dual-action	HEIGH	metallo-peptidase
Macoilin	PF09726.4	gi|557694215|ref|YP_008797269.1|	-	0.06	11.6	14.5	0.087	11.0	10.0	1.1	1	0	0	1	1	1	0	Transmembrane	protein
DUF2562	PF10814.3	gi|557694215|ref|YP_008797269.1|	-	0.066	13.1	4.3	0.038	13.9	0.8	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2562)
CENP-F_leu_zip	PF10473.4	gi|557694215|ref|YP_008797269.1|	-	0.074	12.9	20.7	0.44	10.4	14.4	2.0	1	1	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Seryl_tRNA_N	PF02403.17	gi|557694215|ref|YP_008797269.1|	-	0.081	12.9	16.2	0.55	10.2	5.5	2.5	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
Tropomyosin	PF00261.15	gi|557694215|ref|YP_008797269.1|	-	0.085	11.9	18.9	0.9	8.5	12.3	2.1	1	1	1	2	2	2	0	Tropomyosin
HAUS5	PF14817.1	gi|557694215|ref|YP_008797269.1|	-	0.098	11.1	15.8	0.16	10.4	11.0	1.2	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	5
TMF_DNA_bd	PF12329.3	gi|557694215|ref|YP_008797269.1|	-	0.1	12.4	22.2	0.19	11.5	8.4	2.6	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
Tropomyosin_1	PF12718.2	gi|557694215|ref|YP_008797269.1|	-	0.12	12.2	19.9	0.19	11.5	6.0	2.2	1	1	1	2	2	2	0	Tropomyosin	like
MCPsignal	PF00015.16	gi|557694215|ref|YP_008797269.1|	-	0.16	11.5	7.2	0.26	10.7	5.0	1.2	1	0	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
CENP-H	PF05837.7	gi|557694215|ref|YP_008797269.1|	-	0.16	12.1	10.3	0.32	11.1	7.1	1.5	1	0	0	1	1	1	0	Centromere	protein	H	(CENP-H)
TPR_MLP1_2	PF07926.7	gi|557694215|ref|YP_008797269.1|	-	0.16	11.7	16.3	0.35	10.6	11.3	1.5	1	0	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
Uds1	PF15456.1	gi|557694215|ref|YP_008797269.1|	-	0.18	11.8	15.3	0.26	11.2	10.1	1.6	2	0	0	2	2	1	0	Up-regulated	During	Septation
BLOC1_2	PF10046.4	gi|557694215|ref|YP_008797269.1|	-	0.19	11.8	11.9	6	7.0	1.6	2.6	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Reo_sigmaC	PF04582.7	gi|557694215|ref|YP_008797269.1|	-	0.2	10.7	4.5	2.5	7.2	0.1	2.1	1	1	1	2	2	2	0	Reovirus	sigma	C	capsid	protein
Tup_N	PF08581.5	gi|557694215|ref|YP_008797269.1|	-	0.21	11.8	16.9	0.31	11.2	4.8	2.5	1	1	1	2	2	2	0	Tup	N-terminal
IFT57	PF10498.4	gi|557694215|ref|YP_008797269.1|	-	0.27	9.9	11.8	0.45	9.2	8.2	1.2	1	0	0	1	1	1	0	Intra-flagellar	transport	protein	57
EzrA	PF06160.7	gi|557694215|ref|YP_008797269.1|	-	0.31	9.1	12.9	0.6	8.2	9.0	1.4	1	0	0	1	1	1	0	Septation	ring	formation	regulator,	EzrA
ATG16	PF08614.6	gi|557694215|ref|YP_008797269.1|	-	0.37	10.5	19.3	1.2	8.9	13.3	1.7	1	1	0	1	1	1	0	Autophagy	protein	16	(ATG16)
DUF3584	PF12128.3	gi|557694215|ref|YP_008797269.1|	-	0.48	7.6	15.4	0.74	7.0	10.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
DUF3708	PF12501.3	gi|557694215|ref|YP_008797269.1|	-	0.52	10.1	5.5	1.3	8.8	3.8	1.7	1	0	0	1	1	1	0	Phosphate	ATP-binding	cassette	transporter
zf-CpG_bind_C	PF12269.3	gi|557694215|ref|YP_008797269.1|	-	0.6	9.5	7.4	1.2	8.5	5.1	1.4	1	0	0	1	1	1	0	CpG	binding	protein	zinc	finger	C	terminal	domain
CCDC155	PF14662.1	gi|557694215|ref|YP_008797269.1|	-	0.71	9.4	19.3	1.4	8.4	13.4	1.4	1	0	0	1	1	1	0	Coiled-coil	region	of	CCDC155
V_ATPase_I	PF01496.14	gi|557694215|ref|YP_008797269.1|	-	0.78	7.5	7.7	1.2	6.9	5.3	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Tmemb_cc2	PF10267.4	gi|557694215|ref|YP_008797269.1|	-	0.8	8.2	13.3	1.2	7.6	9.2	1.1	1	0	0	1	1	1	0	Predicted	transmembrane	and	coiled-coil	2	protein
DUF972	PF06156.8	gi|557694215|ref|YP_008797269.1|	-	0.85	10.0	14.9	11	6.4	6.0	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
CALCOCO1	PF07888.6	gi|557694215|ref|YP_008797269.1|	-	0.88	7.7	12.3	1.3	7.1	8.5	1.1	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
ERM	PF00769.14	gi|557694215|ref|YP_008797269.1|	-	0.93	8.9	18.6	1.4	8.3	12.9	1.1	1	0	0	1	1	1	0	Ezrin/radixin/moesin	family
TBPIP	PF07106.8	gi|557694215|ref|YP_008797269.1|	-	1	8.8	16.5	2.9	7.4	7.4	2.2	1	1	1	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
ADIP	PF11559.3	gi|557694215|ref|YP_008797269.1|	-	1.1	9.2	20.7	0.48	10.3	6.9	1.9	1	1	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
Prefoldin_2	PF01920.15	gi|557694215|ref|YP_008797269.1|	-	1.1	9.1	20.1	48	3.7	3.7	2.8	1	1	1	2	2	2	0	Prefoldin	subunit
Snapin_Pallidin	PF14712.1	gi|557694215|ref|YP_008797269.1|	-	1.2	9.5	17.2	0.95	9.8	5.1	2.4	1	1	1	2	2	2	0	Snapin/Pallidin
Cluap1	PF10234.4	gi|557694215|ref|YP_008797269.1|	-	1.2	8.2	13.4	1.9	7.6	9.3	1.3	1	0	0	1	1	1	0	Clusterin-associated	protein-1
Mnd1	PF03962.10	gi|557694215|ref|YP_008797269.1|	-	1.3	8.6	17.5	3.6	7.2	12.0	1.7	1	1	0	1	1	1	0	Mnd1	family
FadA	PF09403.5	gi|557694215|ref|YP_008797269.1|	-	1.6	8.7	11.6	1.6	8.7	6.6	2.0	2	0	0	2	2	1	0	Adhesion	protein	FadA
Jnk-SapK_ap_N	PF09744.4	gi|557694215|ref|YP_008797269.1|	-	1.8	8.5	13.7	4	7.4	9.5	1.5	1	0	0	1	1	1	0	JNK_SAPK-associated	protein-1
MAT1	PF06391.8	gi|557694215|ref|YP_008797269.1|	-	1.8	8.0	11.6	3.4	7.1	8.1	1.3	1	0	0	1	1	1	0	CDK-activating	kinase	assembly	factor	MAT1
DUF745	PF05335.8	gi|557694215|ref|YP_008797269.1|	-	2.1	7.8	14.7	3.6	7.0	10.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF745)
TMF_TATA_bd	PF12325.3	gi|557694215|ref|YP_008797269.1|	-	2.2	8.0	19.7	17	5.1	13.0	2.3	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Rootletin	PF15035.1	gi|557694215|ref|YP_008797269.1|	-	2.2	8.1	19.4	0.83	9.6	11.5	1.7	2	0	0	2	2	1	0	Ciliary	rootlet	component,	centrosome	cohesion
HR1	PF02185.11	gi|557694215|ref|YP_008797269.1|	-	2.2	8.0	18.8	0.34	10.6	6.4	2.5	1	1	1	2	2	2	0	Hr1	repeat
NuA4	PF09340.5	gi|557694215|ref|YP_008797269.1|	-	2.4	7.8	6.0	4.3	7.0	0.4	2.5	2	0	0	2	2	2	0	Histone	acetyltransferase	subunit	NuA4
DivIVA	PF05103.8	gi|557694215|ref|YP_008797269.1|	-	2.6	8.1	18.0	21	5.1	2.1	2.4	1	1	1	2	2	2	0	DivIVA	protein
IncA	PF04156.9	gi|557694215|ref|YP_008797269.1|	-	2.6	7.6	26.3	0.75	9.3	16.0	1.8	1	1	0	1	1	1	0	IncA	protein
Tnp_P_element	PF12017.3	gi|557694215|ref|YP_008797269.1|	-	2.6	7.1	9.1	1.4	8.0	1.2	2.3	1	1	1	2	2	2	0	Transposase	protein
Occludin_ELL	PF07303.8	gi|557694215|ref|YP_008797269.1|	-	2.7	8.7	9.9	3.6	8.3	2.3	2.6	1	1	1	2	2	2	0	Occludin	homology	domain
bZIP_2	PF07716.10	gi|557694215|ref|YP_008797269.1|	-	2.8	7.8	23.2	1.7	8.5	2.2	3.6	2	1	1	3	3	3	0	Basic	region	leucine	zipper
DUF1664	PF07889.7	gi|557694215|ref|YP_008797269.1|	-	3.7	7.3	10.2	1.3	8.7	2.4	2.4	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Phlebovirus_NSM	PF07246.6	gi|557694215|ref|YP_008797269.1|	-	3.8	6.6	9.3	8	5.5	6.5	1.4	1	1	0	1	1	1	0	Phlebovirus	nonstructural	protein	NS-M
Exonuc_VII_L	PF02601.10	gi|557694215|ref|YP_008797269.1|	-	3.9	6.5	8.9	6.8	5.7	6.2	1.3	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
Nup54	PF13874.1	gi|557694215|ref|YP_008797269.1|	-	4.9	6.8	19.0	25	4.5	13.2	2.0	1	1	0	1	1	1	0	Nucleoporin	complex	subunit	54
DUF2203	PF09969.4	gi|557694215|ref|YP_008797269.1|	-	5.2	7.3	12.5	66	3.7	8.1	2.6	2	1	0	2	2	1	0	Uncharacterized	conserved	protein	(DUF2203)
FliJ	PF02050.11	gi|557694215|ref|YP_008797269.1|	-	6.6	6.8	22.6	11	6.0	14.1	2.5	2	1	0	2	2	1	0	Flagellar	FliJ	protein
Syntaxin	PF00804.20	gi|557694215|ref|YP_008797269.1|	-	6.7	6.9	15.2	43	4.3	10.6	2.1	1	1	0	1	1	1	0	Syntaxin
DUF2935	PF11155.3	gi|557694215|ref|YP_008797269.1|	-	7.7	6.6	6.7	1.2e+02	2.7	4.6	2.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
Syntaxin_2	PF14523.1	gi|557694215|ref|YP_008797269.1|	-	7.9	6.5	12.4	17	5.5	8.6	1.5	1	0	0	1	1	1	0	Syntaxin-like	protein
BRE1	PF08647.6	gi|557694215|ref|YP_008797269.1|	-	8.7	6.3	18.6	3.2	7.7	10.8	1.9	2	1	0	2	2	1	0	BRE1	E3	ubiquitin	ligase
HTH_3	PF01381.17	gi|557694216|ref|YP_008797270.1|	-	1.1e-10	41.2	0.6	1.6e-10	40.6	0.4	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.1	gi|557694216|ref|YP_008797270.1|	-	1.7e-09	37.7	0.0	2.3e-09	37.3	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|557694216|ref|YP_008797270.1|	-	1.8e-09	37.5	0.1	2.7e-09	36.9	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|557694216|ref|YP_008797270.1|	-	5.9e-05	22.6	0.1	0.00012	21.6	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Latrotoxin_C	PF15658.1	gi|557694216|ref|YP_008797270.1|	-	0.003	17.3	0.5	0.013	15.3	0.4	1.8	1	1	0	1	1	1	1	Latrotoxin	C-terminal	domain
MCR_C	PF04609.7	gi|557694216|ref|YP_008797270.1|	-	0.0098	14.7	0.1	0.011	14.5	0.1	1.1	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	C
HTH_37	PF13744.1	gi|557694216|ref|YP_008797270.1|	-	0.023	14.5	0.1	0.053	13.3	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
FlgN	PF05130.7	gi|557694216|ref|YP_008797270.1|	-	0.12	12.5	1.6	0.16	12.1	1.1	1.3	1	1	0	1	1	1	0	FlgN	protein
EMG1	PF03587.9	gi|557694217|ref|YP_008797271.1|	-	2e-51	174.1	0.0	2.2e-51	174.0	0.0	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
Rpr2	PF04032.11	gi|557694218|ref|YP_008797272.1|	-	2e-13	49.9	0.2	2.4e-13	49.7	0.2	1.1	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DZR	PF12773.2	gi|557694218|ref|YP_008797272.1|	-	0.00033	20.4	0.1	0.00052	19.7	0.1	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Zn_Tnp_IS1595	PF12760.2	gi|557694218|ref|YP_008797272.1|	-	0.0058	16.4	2.5	0.044	13.5	0.4	2.3	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|557694218|ref|YP_008797272.1|	-	0.0058	16.0	1.9	0.095	12.1	0.3	2.5	2	0	0	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ribbon_3	PF13248.1	gi|557694218|ref|YP_008797272.1|	-	0.0089	15.2	2.0	0.37	10.0	0.1	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
RNHCP	PF12647.2	gi|557694218|ref|YP_008797272.1|	-	0.015	15.0	2.2	0.044	13.6	1.4	1.8	1	1	1	2	2	2	0	RNHCP	domain
GFA	PF04828.9	gi|557694218|ref|YP_008797272.1|	-	0.019	14.9	2.5	0.093	12.6	0.1	2.1	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
zinc_ribbon_5	PF13719.1	gi|557694218|ref|YP_008797272.1|	-	0.04	13.5	7.4	0.077	12.5	0.7	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.14	gi|557694218|ref|YP_008797272.1|	-	0.045	13.4	1.2	0.19	11.4	0.8	1.9	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Nudix_N_2	PF14803.1	gi|557694218|ref|YP_008797272.1|	-	0.095	12.4	3.0	1.2	8.8	0.2	2.6	2	0	0	2	2	2	0	Nudix	N-terminal
zinc_ribbon_2	PF13240.1	gi|557694218|ref|YP_008797272.1|	-	0.1	12.1	6.2	0.52	9.8	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|557694218|ref|YP_008797272.1|	-	0.12	12.1	1.5	0.12	12.1	1.0	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
IBR	PF01485.16	gi|557694218|ref|YP_008797272.1|	-	0.21	11.4	3.8	2.1	8.2	0.1	2.3	1	1	1	2	2	2	0	IBR	domain
DUF35_N	PF12172.3	gi|557694218|ref|YP_008797272.1|	-	0.26	11.2	4.3	2.5	8.1	0.1	2.4	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-CCHC_3	PF13917.1	gi|557694218|ref|YP_008797272.1|	-	0.41	10.4	2.8	9.6	6.0	0.1	2.3	2	0	0	2	2	2	0	Zinc	knuckle
NOB1_Zn_bind	PF08772.6	gi|557694218|ref|YP_008797272.1|	-	0.73	9.7	4.3	3.6	7.4	2.9	2.1	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF2082	PF09855.4	gi|557694218|ref|YP_008797272.1|	-	0.75	9.6	2.6	5.1	7.0	1.8	2.1	1	1	0	1	1	1	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
UPF0547	PF10571.4	gi|557694218|ref|YP_008797272.1|	-	0.98	9.1	5.0	10	5.9	0.4	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
TFIIS_C	PF01096.13	gi|557694218|ref|YP_008797272.1|	-	1.3	8.6	6.0	1.3	8.6	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
FYVE	PF01363.16	gi|557694218|ref|YP_008797272.1|	-	2.1	8.2	6.5	5.1	7.0	4.5	1.6	1	1	0	1	1	1	0	FYVE	zinc	finger
CpXC	PF14353.1	gi|557694218|ref|YP_008797272.1|	-	3.9	7.4	4.9	26	4.8	0.8	2.7	2	1	0	2	2	2	0	CpXC	protein
DUF4379	PF14311.1	gi|557694218|ref|YP_008797272.1|	-	5.3	6.9	7.2	1.8e+02	2.0	0.0	3.1	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4379)
RecR	PF02132.10	gi|557694218|ref|YP_008797272.1|	-	7.6	6.0	6.1	19	4.8	0.5	2.8	3	0	0	3	3	3	0	RecR	protein
Ribosomal_S19e	PF01090.14	gi|557694219|ref|YP_008797273.1|	-	2.6e-51	172.7	0.0	2.9e-51	172.5	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
HTH_12	PF08461.5	gi|557694219|ref|YP_008797273.1|	-	0.0038	16.9	0.0	0.0098	15.5	0.0	1.6	2	0	0	2	2	2	1	Ribonuclease	R	winged-helix	domain
HTH_45	PF14947.1	gi|557694219|ref|YP_008797273.1|	-	0.0075	16.0	0.0	0.012	15.3	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
Pribosyltran	PF00156.22	gi|557694220|ref|YP_008797274.1|	-	2.8e-21	75.5	1.3	5.5e-21	74.5	0.9	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|557694220|ref|YP_008797274.1|	-	0.00032	20.0	0.0	0.026	13.8	0.0	2.5	1	1	2	3	3	3	2	Phosphoribosyl	transferase
UPRTase	PF14681.1	gi|557694220|ref|YP_008797274.1|	-	0.0031	16.7	0.2	0.0044	16.2	0.1	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
DUF4510	PF14971.1	gi|557694220|ref|YP_008797274.1|	-	0.06	13.5	0.0	0.23	11.6	0.0	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4510)
Spermine_synth	PF01564.12	gi|557694221|ref|YP_008797275.1|	-	1.2e-14	53.8	0.0	2e-14	53.1	0.0	1.2	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_30	PF05430.6	gi|557694221|ref|YP_008797275.1|	-	0.00018	21.2	0.0	0.00033	20.3	0.0	1.4	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_26	PF13659.1	gi|557694221|ref|YP_008797275.1|	-	0.0003	20.8	0.1	0.00089	19.2	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557694221|ref|YP_008797275.1|	-	0.0053	17.3	0.0	0.013	16.1	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|557694221|ref|YP_008797275.1|	-	0.012	16.1	0.0	0.022	15.2	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Laminin_G_3	PF13385.1	gi|557694221|ref|YP_008797275.1|	-	0.033	14.4	0.0	0.06	13.5	0.0	1.3	1	0	0	1	1	1	0	Concanavalin	A-like	lectin/glucanases	superfamily
Methyltransf_3	PF01596.12	gi|557694221|ref|YP_008797275.1|	-	0.12	11.3	0.0	0.19	10.7	0.0	1.2	1	0	0	1	1	1	0	O-methyltransferase
Zn-ribbon_8	PF09723.5	gi|557694222|ref|YP_008797276.1|	-	0.00084	19.2	0.9	0.0014	18.5	0.6	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
zf-C2H2	PF00096.21	gi|557694222|ref|YP_008797276.1|	-	0.0078	16.5	2.3	0.24	11.8	0.1	2.3	2	0	0	2	2	2	1	Zinc	finger,	C2H2	type
SprT-like	PF10263.4	gi|557694222|ref|YP_008797276.1|	-	0.0088	15.7	0.4	0.01	15.5	0.3	1.1	1	0	0	1	1	1	1	SprT-like	family
TF_Zn_Ribbon	PF08271.7	gi|557694222|ref|YP_008797276.1|	-	0.021	14.1	2.4	0.47	9.8	0.0	2.2	1	1	0	1	1	1	0	TFIIB	zinc-binding
zf-C2HC5	PF06221.8	gi|557694222|ref|YP_008797276.1|	-	0.025	14.3	0.1	0.033	13.9	0.1	1.2	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
zf-C2H2_4	PF13894.1	gi|557694222|ref|YP_008797276.1|	-	0.054	13.8	0.6	7.7	7.1	0.1	2.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Zn_Tnp_IS1595	PF12760.2	gi|557694222|ref|YP_008797276.1|	-	0.083	12.7	0.7	2.9	7.7	0.1	2.2	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-MYND	PF01753.13	gi|557694222|ref|YP_008797276.1|	-	0.24	11.3	1.5	0.36	10.7	1.0	1.3	1	0	0	1	1	1	0	MYND	finger
zf-H2C2_2	PF13465.1	gi|557694222|ref|YP_008797276.1|	-	0.5	10.7	0.2	0.5	10.7	0.2	2.2	1	1	1	2	2	2	0	Zinc-finger	double	domain
zf-C2HC_2	PF13913.1	gi|557694222|ref|YP_008797276.1|	-	0.88	9.3	0.1	0.88	9.3	0.1	2.1	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
HTH_17	PF12728.2	gi|557694223|ref|YP_008797277.1|	-	2.8e-12	46.6	4.6	6.6e-12	45.5	0.4	3.1	4	0	0	4	4	4	1	Helix-turn-helix	domain
MerR_1	PF13411.1	gi|557694223|ref|YP_008797277.1|	-	2.2e-06	27.3	0.2	5.3e-06	26.1	0.1	1.7	1	0	0	1	1	1	1	MerR	HTH	family	regulatory	protein
MerR	PF00376.18	gi|557694223|ref|YP_008797277.1|	-	1.3e-05	24.6	0.2	2.7e-05	23.6	0.1	1.6	1	0	0	1	1	1	1	MerR	family	regulatory	protein
HTH_23	PF13384.1	gi|557694223|ref|YP_008797277.1|	-	9e-05	21.9	0.2	0.00032	20.2	0.1	1.9	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|557694223|ref|YP_008797277.1|	-	0.0027	17.6	0.2	0.011	15.7	0.1	2.1	1	1	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|557694223|ref|YP_008797277.1|	-	0.0052	16.2	0.0	0.059	12.8	0.0	2.6	2	0	0	2	2	2	1	Sigma-70,	region	4
Sigma70_r4	PF04545.11	gi|557694223|ref|YP_008797277.1|	-	0.018	14.3	1.8	0.57	9.5	0.0	3.0	3	0	0	3	3	3	0	Sigma-70,	region	4
DUF3853	PF12964.2	gi|557694223|ref|YP_008797277.1|	-	0.02	14.6	0.0	0.059	13.1	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3853)
DDRGK	PF09756.4	gi|557694223|ref|YP_008797277.1|	-	0.032	13.6	0.1	0.054	12.9	0.0	1.3	1	0	0	1	1	1	0	DDRGK	domain
HTH_29	PF13551.1	gi|557694223|ref|YP_008797277.1|	-	0.056	13.6	0.1	0.14	12.2	0.1	1.7	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF1323	PF07037.6	gi|557694223|ref|YP_008797277.1|	-	0.079	13.1	0.0	0.13	12.4	0.0	1.5	1	0	0	1	1	1	0	Putative	transcription	regulator	(DUF1323)
MS_channel	PF00924.13	gi|557694224|ref|YP_008797278.1|	-	1.5e-12	47.3	0.1	1.9e-12	46.9	0.0	1.2	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
Nucleoporin2	PF04096.9	gi|557694225|ref|YP_008797279.1|	-	0.043	13.6	0.3	0.083	12.7	0.2	1.6	1	0	0	1	1	1	0	Nucleoporin	autopeptidase
Biotin_lipoyl	PF00364.17	gi|557694226|ref|YP_008797280.1|	-	9.8e-21	73.1	3.8	1.1e-20	73.0	2.6	1.1	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|557694226|ref|YP_008797280.1|	-	4.9e-09	35.7	4.4	1.5e-05	24.5	0.3	2.1	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD	PF00529.15	gi|557694226|ref|YP_008797280.1|	-	5.7e-06	25.8	4.4	0.00087	18.6	0.5	2.0	2	0	0	2	2	2	2	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|557694226|ref|YP_008797280.1|	-	7.5e-06	26.2	1.4	0.0056	17.0	0.2	2.0	1	1	1	2	2	2	2	HlyD	family	secretion	protein
GCV_H	PF01597.14	gi|557694226|ref|YP_008797280.1|	-	2.9e-05	23.7	7.0	5.1e-05	22.9	1.8	2.0	1	1	1	2	2	2	2	Glycine	cleavage	H-protein
RnfC_N	PF13375.1	gi|557694226|ref|YP_008797280.1|	-	5.2e-05	22.8	2.7	0.0016	18.1	0.3	2.0	1	1	1	2	2	2	2	RnfC	Barrel	sandwich	hybrid	domain
HlyD_2	PF12700.2	gi|557694226|ref|YP_008797280.1|	-	0.00025	20.3	3.8	0.052	12.6	0.6	2.0	1	1	1	2	2	2	2	HlyD	family	secretion	protein
PYNP_C	PF07831.8	gi|557694226|ref|YP_008797280.1|	-	0.00096	18.5	1.5	0.37	10.2	0.1	2.2	1	1	1	2	2	2	2	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
DUF2118	PF09891.4	gi|557694226|ref|YP_008797280.1|	-	0.0015	18.2	2.1	0.013	15.1	0.3	2.0	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
Peptidase_M23	PF01551.17	gi|557694226|ref|YP_008797280.1|	-	0.0079	16.2	0.8	0.29	11.1	0.5	2.1	1	1	0	1	1	1	1	Peptidase	family	M23
NQRA	PF05896.6	gi|557694226|ref|YP_008797280.1|	-	0.078	12.1	1.8	0.13	11.4	1.2	1.4	1	1	0	1	1	1	0	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
QRPTase_N	PF02749.11	gi|557694226|ref|YP_008797280.1|	-	0.08	12.7	1.0	2.7	7.8	0.1	2.1	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Transket_pyr	PF02779.19	gi|557694227|ref|YP_008797281.1|	-	1.9e-44	151.2	0.0	2.7e-44	150.7	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|557694227|ref|YP_008797281.1|	-	2e-37	127.8	2.1	1e-36	125.6	0.5	2.5	3	0	0	3	3	3	1	Transketolase,	C-terminal	domain
DUF77	PF01910.12	gi|557694227|ref|YP_008797281.1|	-	0.0086	15.7	0.6	0.022	14.4	0.4	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF77
FMN_red	PF03358.10	gi|557694227|ref|YP_008797281.1|	-	0.045	13.2	0.1	4.1	6.8	0.0	3.2	2	2	1	4	4	4	0	NADPH-dependent	FMN	reductase
E1_dh	PF00676.15	gi|557694228|ref|YP_008797282.1|	-	3.8e-81	272.0	0.0	4.3e-81	271.9	0.0	1.0	1	0	0	1	1	1	1	Dehydrogenase	E1	component
TPP_enzyme_C	PF02775.16	gi|557694228|ref|YP_008797282.1|	-	2.6e-07	30.3	0.1	1.8e-06	27.5	0.1	2.2	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Transketolase_N	PF00456.16	gi|557694228|ref|YP_008797282.1|	-	2.2e-05	23.4	0.0	3.2e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
DXP_synthase_N	PF13292.1	gi|557694228|ref|YP_008797282.1|	-	0.00082	18.3	0.0	0.0022	16.9	0.0	1.7	1	1	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
Microvir_H	PF04687.7	gi|557694228|ref|YP_008797282.1|	-	0.091	11.7	0.0	0.13	11.2	0.0	1.2	1	0	0	1	1	1	0	Microvirus	H	protein	(pilot	protein)
Epimerase	PF01370.16	gi|557694229|ref|YP_008797283.1|	-	4e-51	173.7	0.0	4.9e-51	173.4	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|557694229|ref|YP_008797283.1|	-	1e-28	99.8	0.0	1.3e-28	99.4	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|557694229|ref|YP_008797283.1|	-	2.1e-26	92.4	0.0	2.7e-26	92.1	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|557694229|ref|YP_008797283.1|	-	1.4e-25	89.7	0.0	5e-25	88.0	0.0	1.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|557694229|ref|YP_008797283.1|	-	3.1e-20	72.1	0.2	9.2e-15	54.2	0.0	2.8	3	0	0	3	3	3	2	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|557694229|ref|YP_008797283.1|	-	3.9e-16	59.5	0.1	1.1e-15	58.1	0.0	1.7	2	0	0	2	2	2	1	NADH(P)-binding
adh_short	PF00106.20	gi|557694229|ref|YP_008797283.1|	-	1.5e-09	37.9	0.9	9.5e-09	35.3	0.6	2.2	1	1	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|557694229|ref|YP_008797283.1|	-	7.8e-05	22.4	0.8	0.38	10.3	0.1	3.0	3	0	0	3	3	3	2	KR	domain
NmrA	PF05368.8	gi|557694229|ref|YP_008797283.1|	-	0.0002	20.6	0.1	0.029	13.6	0.0	2.3	2	0	0	2	2	2	2	NmrA-like	family
Epimerase_Csub	PF13950.1	gi|557694229|ref|YP_008797283.1|	-	0.00063	19.6	0.0	0.0012	18.7	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose	4-epimerase	C-term	subunit
Glycos_transf_1	PF00534.15	gi|557694230|ref|YP_008797284.1|	-	1.1e-38	132.3	0.6	1.7e-38	131.7	0.1	1.4	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|557694230|ref|YP_008797284.1|	-	4.3e-24	85.1	0.2	1.7e-23	83.2	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|557694230|ref|YP_008797284.1|	-	1.9e-16	60.0	0.0	5.4e-16	58.6	0.0	1.8	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|557694230|ref|YP_008797284.1|	-	4.5e-12	46.4	12.0	2.9e-10	40.5	6.8	3.0	2	2	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glyco_transf_4	PF13439.1	gi|557694230|ref|YP_008797284.1|	-	3.1e-09	36.8	3.9	2.1e-08	34.1	2.7	2.3	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_transf_20	PF00982.16	gi|557694230|ref|YP_008797284.1|	-	0.00064	18.3	0.0	0.0011	17.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	family	20
Glyco_transf_5	PF08323.6	gi|557694230|ref|YP_008797284.1|	-	0.0042	16.6	2.0	0.69	9.3	0.4	2.4	1	1	0	2	2	2	2	Starch	synthase	catalytic	domain
PhdYeFM_antitox	PF02604.14	gi|557694230|ref|YP_008797284.1|	-	0.021	14.3	0.1	0.047	13.2	0.0	1.6	1	0	0	1	1	1	0	Antitoxin	Phd_YefM,	type	II	toxin-antitoxin	system
Glyco_trans_1_3	PF13528.1	gi|557694230|ref|YP_008797284.1|	-	0.077	12.1	0.0	0.11	11.6	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	1
Glyco_transf_90	PF05686.7	gi|557694230|ref|YP_008797284.1|	-	0.16	10.6	0.0	0.24	10.0	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family	90
Ribosomal_S17e	PF00833.13	gi|557694231|ref|YP_008797285.1|	-	3.2e-07	30.1	0.1	3.4e-07	30.0	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	S17
Rifin_STEVOR	PF02009.11	gi|557694232|ref|YP_008797286.1|	-	0.032	13.8	0.0	0.032	13.8	0.0	1.7	2	0	0	2	2	2	0	Rifin/stevor	family
XPG_I	PF00867.13	gi|557694233|ref|YP_008797287.1|	-	2.1e-26	91.8	0.0	3.8e-26	90.9	0.0	1.5	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.12	gi|557694233|ref|YP_008797287.1|	-	4.6e-17	62.1	0.0	7.8e-17	61.3	0.0	1.4	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.15	gi|557694233|ref|YP_008797287.1|	-	2.5e-06	27.6	0.0	5.1e-06	26.6	0.0	1.5	1	0	0	1	1	1	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_5	PF14520.1	gi|557694233|ref|YP_008797287.1|	-	0.0064	16.6	0.1	0.023	14.8	0.0	2.1	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
HHH_2	PF12826.2	gi|557694233|ref|YP_008797287.1|	-	0.025	14.4	0.1	0.35	10.7	0.0	2.5	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
AAA	PF00004.24	gi|557694234|ref|YP_008797288.1|	-	4.9e-100	330.9	0.0	1e-49	168.1	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|557694234|ref|YP_008797288.1|	-	1.3e-27	95.5	0.4	7.4e-27	93.1	0.5	2.2	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_16	PF13191.1	gi|557694234|ref|YP_008797288.1|	-	9.2e-18	64.8	0.0	6.9e-08	32.6	0.0	2.5	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_2	PF07724.9	gi|557694234|ref|YP_008797288.1|	-	3e-16	59.8	0.0	1.9e-08	34.4	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.7	gi|557694234|ref|YP_008797288.1|	-	7e-16	57.9	0.0	1.2e-07	30.9	0.0	2.9	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|557694234|ref|YP_008797288.1|	-	1.4e-14	54.1	0.0	4.3e-07	29.8	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|557694234|ref|YP_008797288.1|	-	1.3e-13	51.2	0.2	0.0001	22.4	0.0	4.1	2	2	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|557694234|ref|YP_008797288.1|	-	6.5e-13	48.6	0.1	9.9e-05	22.0	0.0	3.9	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.8	gi|557694234|ref|YP_008797288.1|	-	7.7e-12	44.6	0.0	3.2e-05	22.8	0.0	2.5	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_17	PF13207.1	gi|557694234|ref|YP_008797288.1|	-	1.8e-11	44.8	0.1	7.7e-05	23.4	0.0	3.3	3	0	0	3	3	3	2	AAA	domain
Zeta_toxin	PF06414.7	gi|557694234|ref|YP_008797288.1|	-	4.9e-11	42.1	0.0	5.7e-05	22.3	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
AAA_33	PF13671.1	gi|557694234|ref|YP_008797288.1|	-	2.9e-10	40.1	0.0	0.00042	20.2	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
RNA_helicase	PF00910.17	gi|557694234|ref|YP_008797288.1|	-	6.9e-09	35.8	0.0	0.0067	16.5	0.0	2.8	2	0	0	2	2	2	2	RNA	helicase
IstB_IS21	PF01695.12	gi|557694234|ref|YP_008797288.1|	-	2.5e-08	33.5	0.2	0.005	16.2	0.0	2.8	3	0	0	3	3	2	2	IstB-like	ATP	binding	protein
Arch_ATPase	PF01637.13	gi|557694234|ref|YP_008797288.1|	-	3.8e-08	33.3	0.1	0.0067	16.1	0.0	3.3	2	1	0	2	2	2	2	Archaeal	ATPase
ABC_tran	PF00005.22	gi|557694234|ref|YP_008797288.1|	-	1.1e-07	32.2	0.0	0.0079	16.5	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_28	PF13521.1	gi|557694234|ref|YP_008797288.1|	-	1.5e-07	31.5	0.0	0.011	15.6	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|557694234|ref|YP_008797288.1|	-	3e-07	29.8	0.3	0.027	13.6	0.0	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.1	gi|557694234|ref|YP_008797288.1|	-	4.1e-07	29.6	0.8	0.035	13.8	0.0	2.9	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_25	PF13481.1	gi|557694234|ref|YP_008797288.1|	-	1.2e-06	28.0	7.5	0.15	11.4	0.7	4.3	2	2	1	3	3	3	2	AAA	domain
NACHT	PF05729.7	gi|557694234|ref|YP_008797288.1|	-	1.6e-06	27.8	0.0	0.12	12.0	0.0	3.4	4	0	0	4	4	3	2	NACHT	domain
AAA_18	PF13238.1	gi|557694234|ref|YP_008797288.1|	-	2.1e-06	28.0	0.1	0.07	13.4	0.0	3.2	3	0	0	3	3	2	2	AAA	domain
Sigma54_activ_2	PF14532.1	gi|557694234|ref|YP_008797288.1|	-	3e-06	27.3	0.0	0.053	13.5	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|557694234|ref|YP_008797288.1|	-	5.9e-06	26.0	0.2	0.14	11.7	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
KaiC	PF06745.8	gi|557694234|ref|YP_008797288.1|	-	6.4e-06	25.4	0.1	0.18	10.8	0.0	3.3	2	1	1	3	3	3	2	KaiC
CDC48_2	PF02933.12	gi|557694234|ref|YP_008797288.1|	-	7.1e-06	25.5	0.5	2.1e-05	24.0	0.4	1.8	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
Sigma54_activat	PF00158.21	gi|557694234|ref|YP_008797288.1|	-	1.1e-05	25.0	0.0	0.36	10.3	0.0	3.5	2	2	0	2	2	2	2	Sigma-54	interaction	domain
DAP3	PF10236.4	gi|557694234|ref|YP_008797288.1|	-	1.8e-05	23.8	0.0	0.071	12.0	0.0	2.5	2	1	0	2	2	2	2	Mitochondrial	ribosomal	death-associated	protein	3
DUF815	PF05673.8	gi|557694234|ref|YP_008797288.1|	-	2.1e-05	23.5	0.0	0.11	11.4	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
NB-ARC	PF00931.17	gi|557694234|ref|YP_008797288.1|	-	2.2e-05	23.4	0.0	0.19	10.5	0.0	2.4	2	0	0	2	2	2	2	NB-ARC	domain
Viral_helicase1	PF01443.13	gi|557694234|ref|YP_008797288.1|	-	6.4e-05	22.5	0.0	0.041	13.4	0.0	2.3	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
PhoH	PF02562.11	gi|557694234|ref|YP_008797288.1|	-	9.6e-05	21.7	0.2	0.4	9.8	0.0	2.5	2	0	0	2	2	2	2	PhoH-like	protein
Bac_DnaA	PF00308.13	gi|557694234|ref|YP_008797288.1|	-	0.00014	21.5	0.0	0.16	11.5	0.0	2.5	2	0	0	2	2	2	1	Bacterial	dnaA	protein
AAA_3	PF07726.6	gi|557694234|ref|YP_008797288.1|	-	0.00021	20.8	0.0	0.82	9.2	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATP-synt_ab	PF00006.20	gi|557694234|ref|YP_008797288.1|	-	0.00051	19.6	0.0	0.57	9.6	0.0	2.4	2	0	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
SKI	PF01202.17	gi|557694234|ref|YP_008797288.1|	-	0.00065	19.5	0.0	1.1	9.0	0.0	2.5	2	0	0	2	2	2	2	Shikimate	kinase
Rad17	PF03215.10	gi|557694234|ref|YP_008797288.1|	-	0.00089	18.0	0.6	1.3	7.5	0.0	3.0	2	1	1	3	3	3	1	Rad17	cell	cycle	checkpoint	protein
Parvo_NS1	PF01057.12	gi|557694234|ref|YP_008797288.1|	-	0.001	18.0	0.0	1.1	8.1	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
NTPase_1	PF03266.10	gi|557694234|ref|YP_008797288.1|	-	0.001	18.7	2.9	5.9	6.5	0.0	4.3	3	2	2	5	5	5	0	NTPase
UFD1	PF03152.9	gi|557694234|ref|YP_008797288.1|	-	0.0017	17.4	0.0	0.0029	16.7	0.0	1.3	1	0	0	1	1	1	1	Ubiquitin	fusion	degradation	protein	UFD1
Vps4_C	PF09336.5	gi|557694234|ref|YP_008797288.1|	-	0.002	17.9	0.1	0.24	11.3	0.0	3.0	2	1	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
UPF0079	PF02367.12	gi|557694234|ref|YP_008797288.1|	-	0.0021	17.7	0.2	3.2	7.3	0.0	3.0	2	1	1	3	3	3	0	Uncharacterised	P-loop	hydrolase	UPF0079
DUF2075	PF09848.4	gi|557694234|ref|YP_008797288.1|	-	0.0023	16.9	0.0	0.28	10.1	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
ResIII	PF04851.10	gi|557694234|ref|YP_008797288.1|	-	0.0089	15.8	0.0	1.2	8.9	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
KAP_NTPase	PF07693.9	gi|557694234|ref|YP_008797288.1|	-	0.019	13.9	0.0	7.9	5.3	0.0	3.0	2	1	1	3	3	3	0	KAP	family	P-loop	domain
SRPRB	PF09439.5	gi|557694234|ref|YP_008797288.1|	-	0.031	13.4	0.0	7	5.8	0.0	2.4	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
PduV-EutP	PF10662.4	gi|557694234|ref|YP_008797288.1|	-	0.035	13.5	0.0	9.4	5.7	0.0	2.4	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AFG1_ATPase	PF03969.11	gi|557694234|ref|YP_008797288.1|	-	0.039	12.7	0.0	7.7	5.2	0.0	2.4	2	0	0	2	2	2	0	AFG1-like	ATPase
AAA_30	PF13604.1	gi|557694234|ref|YP_008797288.1|	-	0.071	12.6	0.0	18	4.8	0.0	2.7	2	1	1	3	3	2	0	AAA	domain
Baculo_E25	PF05274.6	gi|557694234|ref|YP_008797288.1|	-	0.083	12.4	0.1	0.14	11.6	0.1	1.3	1	0	0	1	1	1	0	Occlusion-derived	virus	envelope	protein	E25
AAA_29	PF13555.1	gi|557694234|ref|YP_008797288.1|	-	0.086	12.3	0.0	18	4.9	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|557694234|ref|YP_008797288.1|	-	0.088	12.2	1.3	19	4.5	0.0	3.2	3	1	1	4	4	3	0	AAA-like	domain
AAA_23	PF13476.1	gi|557694234|ref|YP_008797288.1|	-	0.11	12.7	0.1	28	4.9	0.0	3.0	3	0	0	3	3	2	0	AAA	domain
AAA_11	PF13086.1	gi|557694234|ref|YP_008797288.1|	-	0.11	11.9	0.0	19	4.7	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_21	PF13304.1	gi|557694234|ref|YP_008797288.1|	-	0.5	10.2	2.4	45	3.8	0.0	3.4	2	2	1	3	3	2	0	AAA	domain
HTH_20	PF12840.2	gi|557694235|ref|YP_008797289.1|	-	2.6e-11	43.1	0.1	3.9e-11	42.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|557694235|ref|YP_008797289.1|	-	1.9e-05	24.2	0.1	3e-05	23.5	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|557694235|ref|YP_008797289.1|	-	0.0014	18.2	0.1	0.0023	17.6	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|557694235|ref|YP_008797289.1|	-	0.017	14.6	0.5	0.04	13.5	0.3	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
NCD1	PF04904.8	gi|557694235|ref|YP_008797289.1|	-	0.027	14.1	0.1	0.25	11.0	0.0	2.1	1	1	1	2	2	2	0	NAB	conserved	region	1	(NCD1)
PAX	PF00292.13	gi|557694235|ref|YP_008797289.1|	-	0.058	13.1	0.0	0.072	12.8	0.0	1.1	1	0	0	1	1	1	0	'Paired	box'	domain
Rrf2	PF02082.15	gi|557694235|ref|YP_008797289.1|	-	0.088	12.9	0.1	0.14	12.3	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
DUF3816	PF12822.2	gi|557694236|ref|YP_008797290.1|	-	3e-05	23.9	14.4	3.9e-05	23.5	10.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3816)
Rad51	PF08423.6	gi|557694237|ref|YP_008797291.1|	-	6e-92	307.1	0.0	7.2e-92	306.9	0.0	1.0	1	0	0	1	1	1	1	Rad51
HHH_5	PF14520.1	gi|557694237|ref|YP_008797291.1|	-	2.7e-11	43.4	2.2	4.3e-11	42.8	0.7	1.9	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
RecA	PF00154.16	gi|557694237|ref|YP_008797291.1|	-	3.1e-11	42.9	0.1	5.3e-11	42.1	0.0	1.4	1	1	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
KaiC	PF06745.8	gi|557694237|ref|YP_008797291.1|	-	1.3e-10	40.7	0.0	2.2e-10	40.0	0.0	1.4	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|557694237|ref|YP_008797291.1|	-	3.6e-10	39.5	0.0	5.2e-10	39.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Cdd1	PF11731.3	gi|557694237|ref|YP_008797291.1|	-	0.00023	21.0	0.0	0.00044	20.1	0.0	1.5	1	0	0	1	1	1	1	Pathogenicity	locus
AAA_22	PF13401.1	gi|557694237|ref|YP_008797291.1|	-	0.00072	19.7	0.1	0.0014	18.7	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|557694237|ref|YP_008797291.1|	-	0.0018	18.5	0.0	0.0028	17.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
DUF4332	PF14229.1	gi|557694237|ref|YP_008797291.1|	-	0.017	15.0	0.8	0.038	13.9	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4332)
HHH	PF00633.18	gi|557694237|ref|YP_008797291.1|	-	0.069	12.8	0.6	0.82	9.4	0.0	2.8	2	1	0	2	2	2	0	Helix-hairpin-helix	motif
AAA	PF00004.24	gi|557694237|ref|YP_008797291.1|	-	0.071	13.3	0.1	0.24	11.5	0.0	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IMS_HHH	PF11798.3	gi|557694237|ref|YP_008797291.1|	-	0.096	12.7	0.0	0.33	11.0	0.0	1.9	1	0	0	1	1	1	0	IMS	family	HHH	motif
INCENP_ARK-bind	PF03941.10	gi|557694237|ref|YP_008797291.1|	-	0.13	12.1	0.0	0.29	10.9	0.0	1.5	1	0	0	1	1	1	0	Inner	centromere	protein,	ARK	binding	region
PK	PF00224.16	gi|557694238|ref|YP_008797292.1|	-	5.3e-81	271.9	0.0	6.7e-81	271.6	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|557694238|ref|YP_008797292.1|	-	2.2e-16	59.4	0.0	6e-16	58.0	0.0	1.7	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|557694238|ref|YP_008797292.1|	-	1.6e-05	23.8	0.6	2.5e-05	23.2	0.4	1.4	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
3HCDH_N	PF02737.13	gi|557694239|ref|YP_008797293.1|	-	1.5e-46	158.2	0.0	2.4e-46	157.6	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|557694239|ref|YP_008797293.1|	-	8.9e-23	80.5	0.1	3.2e-22	78.7	0.0	2.0	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|557694239|ref|YP_008797293.1|	-	0.0047	16.7	0.0	0.019	14.8	0.0	2.0	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DUF362	PF04015.7	gi|557694239|ref|YP_008797293.1|	-	0.0092	15.4	0.0	0.018	14.5	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF362)
F420_oxidored	PF03807.12	gi|557694239|ref|YP_008797293.1|	-	0.017	15.5	0.0	0.043	14.2	0.0	1.7	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|557694239|ref|YP_008797293.1|	-	0.1	11.7	0.0	0.18	10.9	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|557694239|ref|YP_008797293.1|	-	0.16	11.7	0.0	0.34	10.6	0.0	1.5	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Bac_luciferase	PF00296.15	gi|557694240|ref|YP_008797294.1|	-	1.4e-17	63.7	0.4	2.9e-16	59.4	0.3	2.0	1	1	0	1	1	1	1	Luciferase-like	monooxygenase
ABC2_membrane_3	PF12698.2	gi|557694241|ref|YP_008797295.1|	-	3.1e-30	105.4	20.0	4.7e-30	104.7	13.9	1.3	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|557694241|ref|YP_008797295.1|	-	1.2e-28	99.7	22.5	1.5e-24	86.3	13.3	2.3	2	0	0	2	2	2	2	ABC-2	type	transporter
ABC2_membrane_4	PF12730.2	gi|557694241|ref|YP_008797295.1|	-	0.00043	19.5	31.4	0.0017	17.5	21.6	1.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|557694242|ref|YP_008797296.1|	-	3.4e-32	111.6	0.0	5e-32	111.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694242|ref|YP_008797296.1|	-	1.2e-15	58.2	0.0	3.3e-10	40.4	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694242|ref|YP_008797296.1|	-	4.1e-05	22.9	0.0	0.0089	15.2	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|557694242|ref|YP_008797296.1|	-	9.6e-05	21.5	0.0	0.0091	15.0	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|557694242|ref|YP_008797296.1|	-	0.0033	17.4	0.0	0.011	15.7	0.0	1.7	2	0	0	2	2	2	1	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|557694242|ref|YP_008797296.1|	-	0.0065	16.3	0.0	0.054	13.4	0.0	2.2	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_29	PF13555.1	gi|557694242|ref|YP_008797296.1|	-	0.012	15.1	0.0	0.021	14.3	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|557694242|ref|YP_008797296.1|	-	0.021	15.1	0.3	0.034	14.4	0.2	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_13	PF13166.1	gi|557694242|ref|YP_008797296.1|	-	0.035	12.6	0.0	0.24	9.8	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|557694242|ref|YP_008797296.1|	-	0.14	11.7	0.5	0.61	9.6	0.1	2.1	2	1	0	2	2	2	0	AAA	domain
HEPN	PF05168.9	gi|557694243|ref|YP_008797297.1|	-	1.8e-35	121.4	0.0	2.1e-35	121.1	0.0	1.0	1	0	0	1	1	1	1	HEPN	domain
PaREP1	PF05942.6	gi|557694243|ref|YP_008797297.1|	-	4.2e-05	23.3	0.7	0.00024	20.9	0.5	2.2	1	1	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
NTP_transf_2	PF01909.18	gi|557694244|ref|YP_008797298.1|	-	4.3e-08	33.3	0.1	5.2e-08	33.1	0.1	1.3	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
Aconitase_C	PF00694.14	gi|557694245|ref|YP_008797299.1|	-	1.9e-33	115.3	0.0	2.8e-33	114.8	0.0	1.2	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Methyltransf_18	PF12847.2	gi|557694246|ref|YP_008797300.1|	-	2.7e-12	47.2	0.0	3.5e-12	46.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|557694246|ref|YP_008797300.1|	-	3.6e-10	39.6	0.0	3.9e-10	39.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|557694246|ref|YP_008797300.1|	-	2.5e-09	37.1	0.0	3.2e-09	36.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|557694246|ref|YP_008797300.1|	-	1.4e-08	34.1	0.0	1.7e-08	33.8	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_25	PF13649.1	gi|557694246|ref|YP_008797300.1|	-	4.7e-07	30.1	0.0	6.1e-07	29.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|557694246|ref|YP_008797300.1|	-	1.6e-06	27.3	0.0	1.8e-06	27.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_23	PF13489.1	gi|557694246|ref|YP_008797300.1|	-	4e-06	26.6	0.0	4.7e-06	26.4	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|557694246|ref|YP_008797300.1|	-	9.9e-06	24.8	0.0	1.3e-05	24.5	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_11	PF08241.7	gi|557694246|ref|YP_008797300.1|	-	2e-05	25.0	0.0	2.7e-05	24.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|557694246|ref|YP_008797300.1|	-	0.0002	20.7	0.0	0.00026	20.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
MetW	PF07021.7	gi|557694246|ref|YP_008797300.1|	-	0.00028	20.3	0.0	0.00037	19.9	0.0	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
UPF0020	PF01170.13	gi|557694246|ref|YP_008797300.1|	-	0.00031	20.3	0.0	0.00047	19.7	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_12	PF08242.7	gi|557694246|ref|YP_008797300.1|	-	0.00083	19.7	0.0	0.001	19.4	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|557694246|ref|YP_008797300.1|	-	0.00085	18.8	0.0	0.0012	18.4	0.0	1.1	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_2	PF00891.13	gi|557694246|ref|YP_008797300.1|	-	0.00097	18.3	0.0	0.0012	18.1	0.0	1.1	1	0	0	1	1	1	1	O-methyltransferase
DOT1	PF08123.8	gi|557694246|ref|YP_008797300.1|	-	0.003	16.9	0.0	0.0046	16.2	0.0	1.3	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_32	PF13679.1	gi|557694246|ref|YP_008797300.1|	-	0.0065	16.1	0.0	0.0072	16.0	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
FmrO	PF07091.6	gi|557694246|ref|YP_008797300.1|	-	0.0094	14.9	0.0	0.011	14.6	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	methyltransferase	(FmrO)
Met_10	PF02475.11	gi|557694246|ref|YP_008797300.1|	-	0.01	15.4	0.0	0.012	15.2	0.0	1.1	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_4	PF02390.12	gi|557694246|ref|YP_008797300.1|	-	0.014	14.4	0.0	0.016	14.2	0.0	1.1	1	0	0	1	1	1	0	Putative	methyltransferase
TehB	PF03848.9	gi|557694246|ref|YP_008797300.1|	-	0.019	14.1	0.0	0.021	13.9	0.0	1.2	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
PCMT	PF01135.14	gi|557694246|ref|YP_008797300.1|	-	0.093	12.2	0.0	0.13	11.8	0.0	1.1	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_9	PF08003.6	gi|557694246|ref|YP_008797300.1|	-	0.1	11.3	0.0	0.11	11.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
IlvN	PF07991.7	gi|557694247|ref|YP_008797301.1|	-	4.1e-69	231.1	0.0	7e-69	230.4	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
IlvC	PF01450.14	gi|557694247|ref|YP_008797301.1|	-	2e-45	154.3	0.1	2.6e-45	153.8	0.1	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|557694247|ref|YP_008797301.1|	-	0.0001	22.1	0.0	0.00078	19.3	0.0	2.1	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|557694247|ref|YP_008797301.1|	-	0.00027	21.2	0.0	0.00062	20.1	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|557694247|ref|YP_008797301.1|	-	0.00056	19.1	0.0	0.001	18.2	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AdoHcyase_NAD	PF00670.16	gi|557694247|ref|YP_008797301.1|	-	0.0018	18.1	0.0	0.0062	16.3	0.0	1.8	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
ACT_5	PF13710.1	gi|557694248|ref|YP_008797302.1|	-	0.022	14.5	0.0	0.031	14.0	0.0	1.2	1	0	0	1	1	1	0	ACT	domain
ACT_4	PF13291.1	gi|557694248|ref|YP_008797302.1|	-	0.044	14.1	0.1	0.06	13.6	0.1	1.2	1	0	0	1	1	1	0	ACT	domain
TPP_enzyme_N	PF02776.13	gi|557694249|ref|YP_008797303.1|	-	3.4e-59	199.1	0.3	4.2e-57	192.3	0.1	2.4	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|557694249|ref|YP_008797303.1|	-	2e-45	154.1	0.4	2.2e-44	150.6	0.0	2.6	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|557694249|ref|YP_008797303.1|	-	4.1e-42	143.1	0.5	1e-41	141.8	0.2	1.8	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
HMGL-like	PF00682.14	gi|557694250|ref|YP_008797304.1|	-	4.6e-75	252.3	1.5	8.3e-75	251.4	1.0	1.4	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.5	gi|557694250|ref|YP_008797304.1|	-	4.9e-11	42.5	0.3	9.5e-11	41.6	0.2	1.5	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
Topo-VIb_trans	PF09239.6	gi|557694251|ref|YP_008797305.1|	-	1.7e-58	196.7	0.0	2.6e-58	196.1	0.0	1.2	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c_3	PF13589.1	gi|557694251|ref|YP_008797305.1|	-	1.1e-08	34.7	0.0	2e-08	33.9	0.0	1.3	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.21	gi|557694251|ref|YP_008797305.1|	-	2.9e-07	30.1	0.0	6.4e-07	29.0	0.0	1.6	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.6	gi|557694251|ref|YP_008797305.1|	-	1.1e-05	24.1	0.0	2e-05	23.3	0.0	1.3	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Arch_ATPase	PF01637.13	gi|557694252|ref|YP_008797306.1|	-	3e-24	86.0	0.1	1.2e-23	84.0	0.0	1.9	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|557694252|ref|YP_008797306.1|	-	2e-08	34.1	0.0	8.5e-08	32.1	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|557694252|ref|YP_008797306.1|	-	1.6e-05	25.0	0.1	8e-05	22.7	0.0	2.1	3	0	0	3	3	3	1	AAA	domain
AAA_16	PF13191.1	gi|557694252|ref|YP_008797306.1|	-	0.0011	18.9	0.8	0.0061	16.5	0.2	2.3	2	1	0	2	2	2	1	AAA	ATPase	domain
Miro	PF08477.8	gi|557694252|ref|YP_008797306.1|	-	0.012	16.0	0.0	0.027	14.9	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
HTH_45	PF14947.1	gi|557694252|ref|YP_008797306.1|	-	0.037	13.8	0.0	0.11	12.3	0.0	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix
GIIM	PF08388.6	gi|557694252|ref|YP_008797306.1|	-	0.097	12.4	0.8	0.49	10.2	0.1	2.4	2	1	0	2	2	2	0	Group	II	intron,	maturase-specific	domain
6PGD	PF00393.14	gi|557694253|ref|YP_008797307.1|	-	2.6e-101	338.6	0.0	3.2e-101	338.3	0.0	1.1	1	0	0	1	1	1	1	6-phosphogluconate	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|557694253|ref|YP_008797307.1|	-	1.7e-49	167.7	0.1	3.4e-49	166.8	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|557694253|ref|YP_008797307.1|	-	1.7e-07	31.5	0.0	5.6e-07	29.9	0.0	1.9	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|557694253|ref|YP_008797307.1|	-	2.1e-06	27.8	1.1	3.9e-06	27.0	0.1	1.9	2	1	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
3HCDH_N	PF02737.13	gi|557694253|ref|YP_008797307.1|	-	2.9e-06	27.0	0.9	1.1e-05	25.1	0.0	2.4	3	0	0	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|557694253|ref|YP_008797307.1|	-	5.6e-05	22.6	0.0	0.0001	21.7	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.18	gi|557694253|ref|YP_008797307.1|	-	0.00023	20.9	0.0	0.0027	17.4	0.0	2.3	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
2-Hacid_dh_C	PF02826.14	gi|557694253|ref|YP_008797307.1|	-	0.0016	17.5	0.3	0.0034	16.5	0.0	1.6	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|557694253|ref|YP_008797307.1|	-	0.0057	15.6	0.0	0.0084	15.1	0.0	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
Mannitol_dh	PF01232.18	gi|557694253|ref|YP_008797307.1|	-	0.054	13.4	0.0	0.2	11.5	0.0	1.9	2	0	0	2	2	2	0	Mannitol	dehydrogenase	Rossmann	domain
HTH_5	PF01022.15	gi|557694254|ref|YP_008797308.1|	-	8e-16	57.4	0.2	1.2e-15	56.8	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|557694254|ref|YP_008797308.1|	-	2.7e-11	43.1	0.0	4.5e-11	42.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|557694254|ref|YP_008797308.1|	-	2.5e-05	23.8	0.0	4.2e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|557694254|ref|YP_008797308.1|	-	4.6e-05	22.9	0.0	8.3e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	MarR	family
PaaX	PF07848.7	gi|557694254|ref|YP_008797308.1|	-	0.00014	21.8	0.0	0.00022	21.1	0.0	1.3	1	0	0	1	1	1	1	PaaX-like	protein
HTH_IclR	PF09339.5	gi|557694254|ref|YP_008797308.1|	-	0.00016	21.2	0.1	0.00025	20.5	0.1	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_27	PF13463.1	gi|557694254|ref|YP_008797308.1|	-	0.00019	21.6	0.0	0.00029	21.0	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|557694254|ref|YP_008797308.1|	-	0.00073	18.8	0.0	0.0015	17.8	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Rrf2	PF02082.15	gi|557694254|ref|YP_008797308.1|	-	0.0014	18.7	0.2	0.0021	18.1	0.1	1.4	1	1	0	1	1	1	1	Transcriptional	regulator
HxlR	PF01638.12	gi|557694254|ref|YP_008797308.1|	-	0.0021	17.6	0.1	0.0029	17.1	0.1	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_29	PF13551.1	gi|557694254|ref|YP_008797308.1|	-	0.0028	17.7	0.1	0.0037	17.3	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
Fe_dep_repress	PF01325.14	gi|557694254|ref|YP_008797308.1|	-	0.0048	16.8	0.1	0.0078	16.1	0.1	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|557694254|ref|YP_008797308.1|	-	0.0058	16.1	0.0	0.0068	15.9	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
MarR	PF01047.17	gi|557694254|ref|YP_008797308.1|	-	0.0089	15.7	0.1	0.014	15.0	0.1	1.3	1	0	0	1	1	1	1	MarR	family
DUF223	PF02721.9	gi|557694254|ref|YP_008797308.1|	-	0.0092	16.0	0.0	0.014	15.4	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF223
Penicillinase_R	PF03965.11	gi|557694254|ref|YP_008797308.1|	-	0.017	15.2	0.1	0.027	14.5	0.1	1.5	1	1	0	1	1	1	0	Penicillinase	repressor
HTH_11	PF08279.7	gi|557694254|ref|YP_008797308.1|	-	0.021	14.4	0.1	0.033	13.8	0.1	1.3	1	0	0	1	1	1	0	HTH	domain
HTH_40	PF14493.1	gi|557694254|ref|YP_008797308.1|	-	0.031	14.4	0.0	0.043	14.0	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|557694254|ref|YP_008797308.1|	-	0.033	13.7	0.0	0.051	13.0	0.0	1.5	1	1	0	1	1	1	0	TFIIE	alpha	subunit
GerE	PF00196.14	gi|557694254|ref|YP_008797308.1|	-	0.061	12.6	0.1	0.13	11.5	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_34	PF13601.1	gi|557694254|ref|YP_008797308.1|	-	0.084	12.9	0.1	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|557694254|ref|YP_008797308.1|	-	0.085	12.6	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix
FeoC	PF09012.5	gi|557694254|ref|YP_008797308.1|	-	0.11	12.2	0.0	0.15	11.8	0.0	1.2	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Pyr_redox_2	PF07992.9	gi|557694255|ref|YP_008797309.1|	-	1.9e-14	54.0	0.0	2.5e-14	53.6	0.0	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|557694255|ref|YP_008797309.1|	-	0.0051	16.5	0.0	2.9	7.6	0.0	2.3	2	0	0	2	2	2	2	FAD-NAD(P)-binding
Pyr_redox_3	PF13738.1	gi|557694255|ref|YP_008797309.1|	-	0.0075	16.3	0.0	1.3	9.0	0.0	3.0	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|557694255|ref|YP_008797309.1|	-	0.011	16.1	0.0	15	6.0	0.0	3.3	3	1	1	4	4	4	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_Gly3P_dh_N	PF01210.18	gi|557694255|ref|YP_008797309.1|	-	0.095	12.4	0.1	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Trp_halogenase	PF04820.9	gi|557694255|ref|YP_008797309.1|	-	0.14	10.7	0.0	0.78	8.2	0.0	2.0	2	0	0	2	2	2	0	Tryptophan	halogenase
TusA	PF01206.12	gi|557694256|ref|YP_008797310.1|	-	1.9e-19	69.0	0.0	2.1e-19	68.8	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DrsE_2	PF13686.1	gi|557694257|ref|YP_008797311.1|	-	1.1e-47	161.4	1.0	1.3e-47	161.3	0.7	1.0	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|557694257|ref|YP_008797311.1|	-	6.7e-11	42.3	0.1	6.9e-10	39.0	0.1	2.0	1	1	0	1	1	1	1	DsrE/DsrF-like	family
Far-17a_AIG1	PF04750.9	gi|557694257|ref|YP_008797311.1|	-	0.029	13.5	0.0	0.033	13.3	0.0	1.2	1	0	0	1	1	1	0	FAR-17a/AIG1-like	protein
Glyco_transf_4	PF13439.1	gi|557694257|ref|YP_008797311.1|	-	0.031	13.9	0.0	0.054	13.2	0.0	1.5	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
Topoisom_I_N	PF02919.10	gi|557694258|ref|YP_008797312.1|	-	1.8e-65	220.2	0.5	1.8e-65	220.2	0.3	3.0	2	1	0	2	2	2	1	Eukaryotic	DNA	topoisomerase	I,	DNA	binding	fragment
Topoisom_I	PF01028.15	gi|557694258|ref|YP_008797312.1|	-	4.7e-60	202.6	6.0	8.9e-60	201.7	4.2	1.4	1	0	0	1	1	1	1	Eukaryotic	DNA	topoisomerase	I,	catalytic	core
Topo_C_assoc	PF14370.1	gi|557694258|ref|YP_008797312.1|	-	1.1e-16	60.1	0.2	1.1e-16	60.1	0.1	2.5	2	0	0	2	2	2	1	C-terminal	topoisomerase	domain
DUF2631	PF10939.3	gi|557694258|ref|YP_008797312.1|	-	0.044	13.6	0.0	0.12	12.2	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2631)
DUF4140	PF13600.1	gi|557694258|ref|YP_008797312.1|	-	0.063	13.7	8.6	7.7	7.0	3.4	3.2	3	0	0	3	3	3	0	N-terminal	domain	of	unknown	function	(DUF4140)
UPF0278	PF08745.6	gi|557694258|ref|YP_008797312.1|	-	0.11	11.7	3.2	0.17	11.0	0.1	2.7	2	1	1	3	3	3	0	UPF0278	family
Glycohydro_20b2	PF14845.1	gi|557694258|ref|YP_008797312.1|	-	0.14	12.7	2.5	11	6.7	1.6	2.6	1	1	0	1	1	1	0	beta-acetyl	hexosaminidase	like
Lsm_C	PF14894.1	gi|557694259|ref|YP_008797313.1|	-	1.6e-24	85.1	1.9	2.6e-24	84.4	0.3	1.9	2	0	0	2	2	2	1	Lsm	C-terminal
CitMHS	PF03600.11	gi|557694260|ref|YP_008797314.1|	-	1.2e-22	80.0	25.3	1.2e-22	80.0	17.5	1.9	2	0	0	2	2	2	1	Citrate	transporter
Na_sulph_symp	PF00939.14	gi|557694260|ref|YP_008797314.1|	-	3.3e-08	32.8	22.7	0.00034	19.6	6.5	3.1	1	1	1	2	2	2	2	Sodium:sulfate	symporter	transmembrane	region
Met_10	PF02475.11	gi|557694261|ref|YP_008797315.1|	-	2.2e-61	206.9	0.0	3.2e-61	206.4	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.9	gi|557694261|ref|YP_008797315.1|	-	2.6e-10	39.9	0.0	8.5e-10	38.2	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|557694261|ref|YP_008797315.1|	-	3.8e-10	39.8	0.0	8.4e-10	38.7	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557694261|ref|YP_008797315.1|	-	7e-09	36.2	0.0	1.4e-08	35.2	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|557694261|ref|YP_008797315.1|	-	1.8e-07	30.7	0.0	2.9e-07	30.0	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_31	PF13847.1	gi|557694261|ref|YP_008797315.1|	-	2e-07	30.6	0.0	7.9e-07	28.7	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|557694261|ref|YP_008797315.1|	-	6.4e-07	29.0	0.0	1e-06	28.4	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_4	PF02390.12	gi|557694261|ref|YP_008797315.1|	-	0.0003	19.8	0.0	0.0005	19.1	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
TRM	PF02005.11	gi|557694261|ref|YP_008797315.1|	-	0.00032	19.7	0.0	0.00042	19.3	0.0	1.2	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
PrmA	PF06325.8	gi|557694261|ref|YP_008797315.1|	-	0.00098	18.3	0.0	0.0014	17.7	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
UPF0020	PF01170.13	gi|557694261|ref|YP_008797315.1|	-	0.0034	16.9	0.0	0.0056	16.2	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Nol1_Nop2_Fmu	PF01189.12	gi|557694261|ref|YP_008797315.1|	-	0.012	15.0	0.0	0.018	14.4	0.0	1.2	1	0	0	1	1	1	0	NOL1/NOP2/sun	family
PRMT5	PF05185.11	gi|557694261|ref|YP_008797315.1|	-	0.016	14.1	0.0	0.021	13.7	0.0	1.1	1	0	0	1	1	1	0	PRMT5	arginine-N-methyltransferase
Methyltransf_23	PF13489.1	gi|557694261|ref|YP_008797315.1|	-	0.021	14.5	0.0	0.36	10.5	0.0	2.1	2	0	0	2	2	2	0	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|557694261|ref|YP_008797315.1|	-	0.06	12.4	0.0	0.086	11.9	0.0	1.1	1	0	0	1	1	1	0	N-6	DNA	Methylase
DNA_methylase	PF00145.12	gi|557694261|ref|YP_008797315.1|	-	0.071	12.2	0.0	0.11	11.6	0.0	1.2	1	0	0	1	1	1	0	C-5	cytosine-specific	DNA	methylase
EVC2_like	PF12297.3	gi|557694262|ref|YP_008797316.1|	-	0.17	10.4	0.2	0.21	10.1	0.1	1.1	1	0	0	1	1	1	0	Ellis	van	Creveld	protein	2	like	protein
Cupredoxin_1	PF13473.1	gi|557694263|ref|YP_008797317.1|	-	0.01	15.6	0.0	0.018	14.8	0.0	1.6	1	1	0	1	1	1	0	Cupredoxin-like	domain
DUF1628	PF07790.6	gi|557694263|ref|YP_008797317.1|	-	0.032	14.9	1.1	0.055	14.2	0.8	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1628)
SP_C-Propep	PF08999.5	gi|557694263|ref|YP_008797317.1|	-	0.035	13.5	0.1	0.055	12.9	0.0	1.4	1	0	0	1	1	1	0	Surfactant	protein	C,	N	terminal	propeptide
DUF2749	PF10907.3	gi|557694263|ref|YP_008797317.1|	-	0.1	12.5	0.7	0.16	11.8	0.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2749)
Histidinol_dh	PF00815.15	gi|557694264|ref|YP_008797318.1|	-	8.6e-122	406.7	5.3	1.1e-121	406.4	3.7	1.0	1	0	0	1	1	1	1	Histidinol	dehydrogenase
DUF1079	PF06435.6	gi|557694264|ref|YP_008797318.1|	-	0.11	12.4	0.4	0.59	10.1	0.0	2.3	2	0	0	2	2	2	0	Repeat	of	unknown	function	(DUF1079)
Pur_DNA_glyco	PF02245.11	gi|557694265|ref|YP_008797319.1|	-	6.3e-51	172.1	0.0	1.2e-50	171.2	0.0	1.4	1	1	0	1	1	1	1	Methylpurine-DNA	glycosylase	(MPG)
UDG	PF03167.14	gi|557694266|ref|YP_008797320.1|	-	5.1e-42	142.9	0.0	6.2e-42	142.6	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
AhpC-TSA	PF00578.16	gi|557694267|ref|YP_008797321.1|	-	6.7e-36	122.7	0.0	8.1e-36	122.4	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|557694267|ref|YP_008797321.1|	-	6.5e-20	71.1	0.0	7.8e-20	70.8	0.0	1.0	1	0	0	1	1	1	1	Redoxin
AhpC-TSA_2	PF13911.1	gi|557694267|ref|YP_008797321.1|	-	0.0017	18.2	0.0	0.0021	17.9	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
DUF4599	PF15371.1	gi|557694267|ref|YP_008797321.1|	-	0.024	14.7	0.0	0.046	13.7	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4599)
SCO1-SenC	PF02630.9	gi|557694267|ref|YP_008797321.1|	-	0.072	12.7	0.0	1.1	8.8	0.0	2.3	2	1	0	2	2	2	0	SCO1/SenC
SCP2	PF02036.12	gi|557694268|ref|YP_008797322.1|	-	1e-13	51.4	0.0	1.2e-13	51.1	0.0	1.2	1	0	0	1	1	1	1	SCP-2	sterol	transfer	family
Alkyl_sulf_C	PF14864.1	gi|557694268|ref|YP_008797322.1|	-	3e-06	27.2	0.0	3.7e-06	26.9	0.0	1.1	1	0	0	1	1	1	1	Alkyl	sulfatase	C-terminal
CDP-OH_P_transf	PF01066.16	gi|557694269|ref|YP_008797323.1|	-	3.6e-15	56.1	15.0	4.6e-14	52.5	10.3	2.1	1	1	0	1	1	1	1	CDP-alcohol	phosphatidyltransferase
UPF0066	PF01980.11	gi|557694270|ref|YP_008797324.1|	-	5.8e-35	119.8	0.0	7.3e-35	119.5	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
GCV_H	PF01597.14	gi|557694272|ref|YP_008797326.1|	-	5.9e-42	142.1	0.1	7e-42	141.9	0.1	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|557694272|ref|YP_008797326.1|	-	0.0051	16.4	0.0	0.0098	15.5	0.0	1.4	1	0	0	1	1	1	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|557694272|ref|YP_008797326.1|	-	0.0096	15.6	0.0	0.013	15.1	0.0	1.3	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
zinc_ribbon_2	PF13240.1	gi|557694273|ref|YP_008797327.1|	-	0.0033	16.8	0.8	0.99	8.9	0.0	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|557694273|ref|YP_008797327.1|	-	0.016	14.4	1.8	0.64	9.3	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
CBM_10	PF02013.11	gi|557694273|ref|YP_008797327.1|	-	0.026	14.7	0.6	0.026	14.7	0.4	1.5	2	0	0	2	2	2	0	Cellulose	or	protein	binding	domain
DZR	PF12773.2	gi|557694273|ref|YP_008797327.1|	-	0.04	13.7	0.7	0.061	13.1	0.5	1.3	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-C3HC4_2	PF13923.1	gi|557694273|ref|YP_008797327.1|	-	0.044	13.8	0.8	0.057	13.4	0.6	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Nop10p	PF04135.7	gi|557694273|ref|YP_008797327.1|	-	0.06	13.0	0.4	0.097	12.4	0.3	1.4	1	0	0	1	1	1	0	Nucleolar	RNA-binding	protein,	Nop10p	family
Orexin	PF02072.10	gi|557694273|ref|YP_008797327.1|	-	0.065	13.0	0.2	0.074	12.8	0.2	1.1	1	0	0	1	1	1	0	Prepro-orexin
BIR	PF00653.16	gi|557694273|ref|YP_008797327.1|	-	0.066	13.6	0.1	0.077	13.4	0.1	1.2	1	0	0	1	1	1	0	Inhibitor	of	Apoptosis	domain
Cript	PF10235.4	gi|557694273|ref|YP_008797327.1|	-	0.12	12.7	0.8	0.14	12.5	0.6	1.2	1	0	0	1	1	1	0	Microtubule-associated	protein	CRIPT
Zn_Tnp_IS1595	PF12760.2	gi|557694273|ref|YP_008797327.1|	-	0.58	10.0	4.7	0.71	9.7	0.2	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Peptidase_M20	PF01546.23	gi|557694274|ref|YP_008797328.1|	-	1.1e-30	106.5	0.0	1.4e-30	106.1	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|557694274|ref|YP_008797328.1|	-	1.2e-13	50.7	0.0	2.2e-13	49.8	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|557694274|ref|YP_008797328.1|	-	0.0021	17.8	0.0	0.004	16.9	0.0	1.5	1	0	0	1	1	1	1	Peptidase	family	M28
DegT_DnrJ_EryC1	PF01041.12	gi|557694276|ref|YP_008797330.1|	-	2.7e-114	382.0	0.0	3.1e-114	381.8	0.0	1.0	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.16	gi|557694276|ref|YP_008797330.1|	-	5.4e-06	25.5	0.0	1.4e-05	24.2	0.0	1.9	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.15	gi|557694276|ref|YP_008797330.1|	-	0.00029	19.2	0.0	0.00046	18.5	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.14	gi|557694276|ref|YP_008797330.1|	-	0.00038	19.3	0.0	0.0067	15.1	0.0	2.0	2	0	0	2	2	2	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|557694276|ref|YP_008797330.1|	-	0.00083	18.5	0.0	0.0014	17.8	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
Glyoxalase_4	PF13669.1	gi|557694276|ref|YP_008797330.1|	-	0.0017	18.3	0.0	0.064	13.2	0.0	2.7	2	2	0	2	2	2	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
PEP_mutase	PF13714.1	gi|557694276|ref|YP_008797330.1|	-	0.053	12.7	0.0	0.18	10.9	0.0	1.8	2	0	0	2	2	2	0	Phosphoenolpyruvate	phosphomutase
Antitoxin-MazE	PF04014.13	gi|557694277|ref|YP_008797331.1|	-	0.02	14.5	0.0	0.046	13.4	0.0	1.6	1	0	0	1	1	1	0	Antidote-toxin	recognition	MazE
Transposase_28	PF04195.7	gi|557694277|ref|YP_008797331.1|	-	0.024	13.9	0.0	0.063	12.5	0.0	1.6	1	1	1	2	2	2	0	Putative	gypsy	type	transposon
Mrr_N	PF14338.1	gi|557694277|ref|YP_008797331.1|	-	0.12	12.4	0.0	0.22	11.6	0.0	1.4	1	0	0	1	1	1	0	Mrr	N-terminal	domain
Glucokinase	PF02685.11	gi|557694277|ref|YP_008797331.1|	-	0.15	10.7	0.0	0.22	10.2	0.0	1.1	1	0	0	1	1	1	0	Glucokinase
HxlR	PF01638.12	gi|557694278|ref|YP_008797332.1|	-	5.2e-28	96.5	0.0	8.2e-15	54.2	0.0	2.5	1	1	1	2	2	2	2	HxlR-like	helix-turn-helix
HTH_5	PF01022.15	gi|557694278|ref|YP_008797332.1|	-	1e-07	31.5	0.2	0.00015	21.3	0.0	2.4	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.1	gi|557694278|ref|YP_008797332.1|	-	1.1e-07	31.6	0.0	0.0012	18.5	0.0	2.2	2	0	0	2	2	2	2	Winged	helix-turn-helix
HTH_20	PF12840.2	gi|557694278|ref|YP_008797332.1|	-	7.4e-07	28.8	0.0	0.017	14.9	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|557694278|ref|YP_008797332.1|	-	5.6e-06	26.5	0.0	0.0065	16.7	0.0	2.5	2	1	0	2	2	2	2	Winged	helix	DNA-binding	domain
DUF4423	PF14394.1	gi|557694278|ref|YP_008797332.1|	-	0.00084	18.9	0.0	0.063	12.8	0.0	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
PadR	PF03551.9	gi|557694278|ref|YP_008797332.1|	-	0.00093	18.9	0.0	0.011	15.4	0.0	2.6	2	1	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
MarR_2	PF12802.2	gi|557694278|ref|YP_008797332.1|	-	0.0011	18.5	0.0	1.5	8.5	0.0	2.4	2	0	0	2	2	2	2	MarR	family
Rio2_N	PF09202.6	gi|557694278|ref|YP_008797332.1|	-	0.0066	16.4	0.0	3.2	7.8	0.0	2.3	2	0	0	2	2	2	2	Rio2,	N-terminal
Rrf2	PF02082.15	gi|557694278|ref|YP_008797332.1|	-	0.0089	16.1	0.0	0.19	11.8	0.0	2.3	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_24	PF13412.1	gi|557694278|ref|YP_008797332.1|	-	0.041	13.2	0.0	4.8	6.6	0.0	2.4	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|557694278|ref|YP_008797332.1|	-	0.094	12.4	0.0	11	5.8	0.0	2.3	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
B-block_TFIIIC	PF04182.7	gi|557694278|ref|YP_008797332.1|	-	0.14	12.0	0.2	7	6.5	0.1	2.2	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
Protoglobin	PF11563.3	gi|557694279|ref|YP_008797333.1|	-	4.8e-35	120.5	0.1	6.3e-35	120.1	0.1	1.2	1	0	0	1	1	1	1	Protoglobin
dsDNA_bind	PF01984.15	gi|557694280|ref|YP_008797334.1|	-	0.004	17.1	0.0	0.0049	16.8	0.0	1.2	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
PmbA_TldD	PF01523.11	gi|557694281|ref|YP_008797335.1|	-	6.4e-51	173.3	0.1	8.4e-51	172.9	0.1	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Ribosomal_L16	PF00252.13	gi|557694282|ref|YP_008797336.1|	-	8.1e-23	80.6	0.1	1e-22	80.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
RVT_3	PF13456.1	gi|557694283|ref|YP_008797337.1|	-	1.5e-24	85.5	0.7	1.8e-24	85.2	0.5	1.1	1	0	0	1	1	1	1	Reverse	transcriptase-like
RNase_H	PF00075.19	gi|557694283|ref|YP_008797337.1|	-	4.6e-21	75.5	0.1	5.3e-21	75.3	0.1	1.0	1	0	0	1	1	1	1	RNase	H
E2_bind	PF08825.5	gi|557694283|ref|YP_008797337.1|	-	0.053	13.2	0.3	0.073	12.8	0.2	1.2	1	0	0	1	1	1	0	E2	binding	domain
Ribosomal_S18	PF01084.15	gi|557694283|ref|YP_008797337.1|	-	0.097	12.5	0.2	0.18	11.6	0.1	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S18
Anti-adapt_IraP	PF10796.4	gi|557694283|ref|YP_008797337.1|	-	0.16	12.4	0.7	0.48	10.8	0.1	1.9	1	1	1	2	2	2	0	Sigma-S	stabilisation	anti-adaptor	protein
2-oxoacid_dh	PF00198.18	gi|557694284|ref|YP_008797338.1|	-	1.7e-58	197.6	0.0	2.2e-58	197.2	0.0	1.0	1	0	0	1	1	1	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
AATase	PF07247.7	gi|557694284|ref|YP_008797338.1|	-	0.15	10.6	0.0	0.44	9.0	0.0	1.7	2	0	0	2	2	2	0	Alcohol	acetyltransferase
DUF1297	PF06973.7	gi|557694285|ref|YP_008797339.1|	-	1.1e-74	249.8	0.0	1.4e-74	249.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|557694285|ref|YP_008797339.1|	-	4e-43	146.1	0.0	5.9e-43	145.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|557694285|ref|YP_008797339.1|	-	0.00011	21.9	0.0	0.0019	17.9	0.0	2.2	1	1	0	1	1	1	1	ATP-grasp	domain
DUF1297	PF06973.7	gi|557694286|ref|YP_008797340.1|	-	3.2e-56	189.6	0.1	4.7e-56	189.0	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|557694286|ref|YP_008797340.1|	-	7.6e-38	129.0	0.0	1.8e-37	127.8	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|557694286|ref|YP_008797340.1|	-	0.00014	21.6	0.0	0.00025	20.8	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|557694286|ref|YP_008797340.1|	-	0.0027	17.6	0.0	0.0055	16.5	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|557694286|ref|YP_008797340.1|	-	0.019	14.2	0.0	0.033	13.4	0.0	1.3	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
DUF87	PF01935.12	gi|557694287|ref|YP_008797341.1|	-	4e-16	59.5	0.4	9.9e-16	58.2	0.3	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|557694287|ref|YP_008797341.1|	-	6.9e-15	55.2	0.0	5.3e-13	49.0	0.0	2.2	1	1	0	1	1	1	1	AAA-like	domain
TrwB_AAD_bind	PF10412.4	gi|557694287|ref|YP_008797341.1|	-	7.7e-05	21.4	0.0	0.00016	20.3	0.0	1.4	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
NurA	PF09376.5	gi|557694288|ref|YP_008797342.1|	-	0.00023	20.7	0.2	0.00083	18.9	0.1	2.0	2	1	0	2	2	2	1	NurA	domain
GatB_N	PF02934.10	gi|557694289|ref|YP_008797343.1|	-	3.2e-76	255.9	0.1	4.5e-76	255.4	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|557694289|ref|YP_008797343.1|	-	9.4e-22	77.3	0.1	2.7e-21	75.8	0.0	1.9	2	0	0	2	2	2	1	GatB	domain
GAD	PF02938.9	gi|557694289|ref|YP_008797343.1|	-	1.1e-14	54.3	0.3	2.4e-13	50.0	0.1	2.6	2	0	0	2	2	2	1	GAD	domain
YqeY	PF09424.5	gi|557694289|ref|YP_008797343.1|	-	0.0094	15.8	0.1	0.033	14.0	0.0	1.9	1	0	0	1	1	1	1	Yqey-like	protein
DUF3562	PF12085.3	gi|557694289|ref|YP_008797343.1|	-	0.013	15.3	1.1	0.18	11.6	0.0	3.5	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3562)
Antimicrobial_3	PF08025.6	gi|557694289|ref|YP_008797343.1|	-	0.12	12.1	0.2	0.28	10.9	0.1	1.5	1	0	0	1	1	1	0	Spider	antimicrobial	peptide
Asparaginase	PF00710.15	gi|557694290|ref|YP_008797344.1|	-	1.7e-90	303.1	0.1	2.1e-90	302.7	0.1	1.1	1	0	0	1	1	1	1	Asparaginase
DMA	PF03474.9	gi|557694290|ref|YP_008797344.1|	-	0.037	13.8	4.0	0.038	13.8	0.3	2.6	3	0	0	3	3	3	0	DMRTA	motif
MarR_2	PF12802.2	gi|557694291|ref|YP_008797345.1|	-	2.6e-07	30.1	0.0	3.9e-07	29.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|557694291|ref|YP_008797345.1|	-	2.6e-06	26.9	0.0	5.8e-06	25.8	0.0	1.6	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|557694291|ref|YP_008797345.1|	-	0.00085	18.6	0.0	0.0032	16.8	0.0	1.9	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
PuR_N	PF09182.5	gi|557694291|ref|YP_008797345.1|	-	0.0018	17.8	0.1	0.02	14.5	0.0	2.0	2	0	0	2	2	2	1	Bacterial	purine	repressor,	N-terminal
DUF1495	PF07381.6	gi|557694291|ref|YP_008797345.1|	-	0.0042	16.7	0.0	0.0092	15.6	0.0	1.7	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_11	PF08279.7	gi|557694291|ref|YP_008797345.1|	-	0.022	14.4	0.0	0.081	12.5	0.0	1.9	2	1	1	3	3	3	0	HTH	domain
HTH_20	PF12840.2	gi|557694291|ref|YP_008797345.1|	-	0.087	12.6	0.0	0.15	11.9	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|557694291|ref|YP_008797345.1|	-	0.095	12.2	0.0	0.25	10.9	0.0	1.7	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_23	PF13384.1	gi|557694291|ref|YP_008797345.1|	-	0.1	12.2	0.0	0.23	11.1	0.0	1.6	1	1	0	1	1	1	0	Homeodomain-like	domain
AA_kinase	PF00696.23	gi|557694292|ref|YP_008797346.1|	-	4.3e-24	85.3	0.9	6.7e-24	84.7	0.7	1.3	1	0	0	1	1	1	1	Amino	acid	kinase	family
UPF0175	PF03683.8	gi|557694293|ref|YP_008797347.1|	-	2.7e-12	45.9	0.0	4.3e-12	45.3	0.0	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0175)
RHH_1	PF01402.16	gi|557694293|ref|YP_008797347.1|	-	3.4e-05	23.5	0.5	9.8e-05	22.0	0.2	2.0	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
HTH_23	PF13384.1	gi|557694293|ref|YP_008797347.1|	-	0.013	15.1	0.2	0.034	13.7	0.1	1.8	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_28	PF13518.1	gi|557694293|ref|YP_008797347.1|	-	0.027	14.4	0.1	0.18	11.8	0.1	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|557694293|ref|YP_008797347.1|	-	0.06	13.6	1.2	1.5	9.1	0.2	2.9	2	1	0	2	2	2	0	Helix-turn-helix	domain
DUF3141	PF11339.3	gi|557694293|ref|YP_008797347.1|	-	0.2	9.9	0.8	0.26	9.5	0.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3141)
UPF0278	PF08745.6	gi|557694294|ref|YP_008797348.1|	-	0.0081	15.4	0.2	0.03	13.5	0.1	1.9	2	0	0	2	2	2	1	UPF0278	family
DUF2674	PF10879.3	gi|557694294|ref|YP_008797348.1|	-	0.019	14.6	0.1	0.049	13.3	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2674)
RRP7	PF12923.2	gi|557694294|ref|YP_008797348.1|	-	0.019	14.9	1.1	0.022	14.7	0.1	1.6	2	0	0	2	2	2	0	Ribosomal	RNA-processing	protein	7	(RRP7)
DUF2309	PF10070.4	gi|557694294|ref|YP_008797348.1|	-	0.085	10.9	1.3	1.1	7.2	0.9	2.0	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2309)
Osmo_CC	PF08946.5	gi|557694294|ref|YP_008797348.1|	-	1.2	9.1	5.8	0.55	10.3	1.6	2.2	2	0	0	2	2	2	0	Osmosensory	transporter	coiled	coil
E1-E2_ATPase	PF00122.15	gi|557694295|ref|YP_008797349.1|	-	5.3e-71	238.2	7.6	5.3e-71	238.2	5.3	2.6	1	1	1	2	2	2	2	E1-E2	ATPase
Hydrolase	PF00702.21	gi|557694295|ref|YP_008797349.1|	-	2.7e-39	135.7	1.9	6.3e-39	134.6	0.5	2.2	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase_C	PF00689.16	gi|557694295|ref|YP_008797349.1|	-	1.8e-31	109.0	4.0	1.8e-31	109.0	2.8	2.7	3	1	0	3	3	3	1	Cation	transporting	ATPase,	C-terminus
Cation_ATPase_N	PF00690.21	gi|557694295|ref|YP_008797349.1|	-	2e-25	88.0	0.0	4.4e-25	86.9	0.0	1.6	1	0	0	1	1	1	1	Cation	transporter/ATPase,	N-terminus
Hydrolase_like2	PF13246.1	gi|557694295|ref|YP_008797349.1|	-	8.7e-22	76.8	0.0	1.7e-21	75.9	0.0	1.5	1	0	0	1	1	1	1	Putative	hydrolase	of	sodium-potassium	ATPase	alpha	subunit
HAD	PF12710.2	gi|557694295|ref|YP_008797349.1|	-	6.3e-21	75.4	0.1	1.2e-19	71.2	0.0	2.9	3	1	1	4	4	4	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|557694295|ref|YP_008797349.1|	-	4.8e-05	23.0	0.3	0.011	15.3	0.3	2.5	2	0	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
DUF3650	PF12368.3	gi|557694295|ref|YP_008797349.1|	-	0.026	14.0	0.2	8.5	5.9	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3650)
DUF2275	PF10039.4	gi|557694295|ref|YP_008797349.1|	-	2.8	7.8	5.3	14	5.5	0.4	2.9	1	1	1	2	2	2	0	Predicted	integral	membrane	protein	(DUF2275)
HEAT_2	PF13646.1	gi|557694296|ref|YP_008797350.1|	-	0.019	15.2	0.1	0.022	15.0	0.1	1.1	1	0	0	1	1	1	0	HEAT	repeats
AF0941-like	PF14591.1	gi|557694296|ref|YP_008797350.1|	-	0.056	13.5	0.1	0.079	13.0	0.1	1.3	1	0	0	1	1	1	0	AF0941-like
THP2	PF09432.5	gi|557694296|ref|YP_008797350.1|	-	0.098	12.5	0.2	0.11	12.3	0.1	1.1	1	0	0	1	1	1	0	Tho	complex	subunit	THP2
PIN	PF01850.16	gi|557694297|ref|YP_008797351.1|	-	1.1e-09	38.6	0.8	1.2e-09	38.4	0.5	1.0	1	0	0	1	1	1	1	PIN	domain
RasGAP_C	PF03836.10	gi|557694297|ref|YP_008797351.1|	-	0.0021	17.7	0.0	0.0026	17.4	0.0	1.1	1	0	0	1	1	1	1	RasGAP	C-terminus
AF0941-like	PF14591.1	gi|557694297|ref|YP_008797351.1|	-	0.0073	16.3	0.1	0.012	15.6	0.1	1.4	1	0	0	1	1	1	1	AF0941-like
GvpK	PF05121.7	gi|557694297|ref|YP_008797351.1|	-	0.1	12.4	0.3	0.17	11.7	0.2	1.3	1	0	0	1	1	1	0	Gas	vesicle	protein	K
eRF1_2	PF03464.10	gi|557694298|ref|YP_008797352.1|	-	4.9e-37	127.2	0.1	1.4e-36	125.7	0.0	1.8	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|557694298|ref|YP_008797352.1|	-	5.2e-27	94.3	0.6	3.4e-26	91.7	0.2	2.3	2	0	0	2	2	2	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|557694298|ref|YP_008797352.1|	-	4.4e-23	81.2	0.0	7.9e-23	80.4	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	1
Ribosomal_L7Ae	PF01248.21	gi|557694298|ref|YP_008797352.1|	-	0.014	14.9	0.1	0.036	13.5	0.1	1.8	1	0	0	1	1	1	0	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
Resolvase	PF00239.16	gi|557694298|ref|YP_008797352.1|	-	0.017	14.9	2.3	3.2	7.6	0.0	3.5	3	1	0	3	3	3	0	Resolvase,	N	terminal	domain
HypA	PF01155.14	gi|557694298|ref|YP_008797352.1|	-	0.052	13.2	0.1	0.12	12.0	0.1	1.5	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DUF3107	PF11305.3	gi|557694298|ref|YP_008797352.1|	-	0.089	12.6	0.1	4.1	7.3	0.0	3.0	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3107)
zf-ribbon_3	PF13248.1	gi|557694298|ref|YP_008797352.1|	-	0.11	11.7	0.5	0.2	10.8	0.4	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-trcl	PF13451.1	gi|557694298|ref|YP_008797352.1|	-	0.12	11.9	1.7	0.36	10.4	1.2	1.7	1	1	0	1	1	1	0	Probable	zinc-binding	domain
Ribosomal_S27e	PF01667.12	gi|557694298|ref|YP_008797352.1|	-	0.27	10.8	1.4	6.1	6.4	0.1	2.3	2	0	0	2	2	2	0	Ribosomal	protein	S27
zinc_ribbon_5	PF13719.1	gi|557694298|ref|YP_008797352.1|	-	1.9	8.1	4.3	9.7	5.8	0.2	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|557694298|ref|YP_008797352.1|	-	2	8.1	4.5	14	5.5	0.3	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
DeoC	PF01791.4	gi|557694300|ref|YP_008797354.1|	-	3.8e-35	121.2	0.0	4.3e-35	121.1	0.0	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DUF556	PF04476.8	gi|557694300|ref|YP_008797354.1|	-	0.008	15.4	0.7	0.25	10.5	0.1	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF556)
PcrB	PF01884.12	gi|557694300|ref|YP_008797354.1|	-	0.12	11.6	0.7	6.3	5.9	0.0	2.6	2	1	0	2	2	2	0	PcrB	family
Radical_SAM	PF04055.16	gi|557694301|ref|YP_008797355.1|	-	1.1e-14	54.9	0.0	3.4e-14	53.3	0.0	1.8	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|557694301|ref|YP_008797355.1|	-	2.9e-06	27.4	0.1	5.4e-06	26.5	0.1	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|557694301|ref|YP_008797355.1|	-	0.003	17.5	0.1	0.0064	16.5	0.1	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
HAD_2	PF13419.1	gi|557694302|ref|YP_008797356.1|	-	1.1e-27	97.3	0.0	1.3e-27	97.1	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|557694302|ref|YP_008797356.1|	-	9.3e-14	50.9	0.0	1.5e-13	50.2	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|557694302|ref|YP_008797356.1|	-	2.2e-13	51.1	0.0	6.8e-13	49.5	0.0	1.7	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|557694302|ref|YP_008797356.1|	-	0.0064	16.6	0.0	0.015	15.5	0.0	1.7	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
PGP_phosphatase	PF09419.5	gi|557694302|ref|YP_008797356.1|	-	0.009	15.3	0.2	0.36	10.1	0.0	2.6	2	1	1	3	3	3	1	Mitochondrial	PGP	phosphatase
tRNA-synt_1g	PF09334.6	gi|557694303|ref|YP_008797357.1|	-	1.9e-129	431.7	0.0	2.3e-129	431.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|557694303|ref|YP_008797357.1|	-	1.4e-08	34.6	0.0	2.4e-08	33.9	0.0	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1	PF00133.17	gi|557694303|ref|YP_008797357.1|	-	3.8e-06	25.2	0.3	0.00045	18.3	0.0	3.2	2	2	2	4	4	4	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DZR	PF12773.2	gi|557694303|ref|YP_008797357.1|	-	0.0003	20.5	7.7	0.036	13.8	2.7	2.5	1	1	1	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|557694303|ref|YP_008797357.1|	-	0.0022	17.1	10.8	0.37	10.0	3.3	3.3	2	2	0	2	2	2	2	zinc-ribbon	domain
PDDEXK_1	PF12705.2	gi|557694303|ref|YP_008797357.1|	-	0.012	15.0	0.0	0.021	14.2	0.0	1.3	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
zf-C2HC5	PF06221.8	gi|557694303|ref|YP_008797357.1|	-	0.1	12.3	5.3	1.6	8.5	0.2	2.3	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
tRNA-synt_1f	PF01921.13	gi|557694303|ref|YP_008797357.1|	-	0.1	11.2	0.0	0.17	10.4	0.0	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(K)
zinc_ribbon_2	PF13240.1	gi|557694303|ref|YP_008797357.1|	-	1.6	8.3	13.7	0.1	12.0	2.7	3.3	2	1	1	3	3	3	0	zinc-ribbon	domain
HypA	PF01155.14	gi|557694303|ref|YP_008797357.1|	-	2.5	7.8	4.1	5	6.8	0.2	2.2	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
Med27	PF11571.3	gi|557694303|ref|YP_008797357.1|	-	7.7	6.7	6.3	73	3.5	2.6	2.5	1	1	1	2	2	2	0	Mediator	complex	subunit	27
LSM	PF01423.17	gi|557694305|ref|YP_008797359.1|	-	0.025	14.0	0.1	0.049	13.1	0.0	1.5	1	0	0	1	1	1	0	LSM	domain
PNP_UDP_1	PF01048.15	gi|557694306|ref|YP_008797360.1|	-	5.2e-36	123.7	0.1	5.7e-36	123.6	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Oxidored_q6	PF01058.17	gi|557694307|ref|YP_008797361.1|	-	0.081	12.5	0.1	0.14	11.7	0.1	1.3	1	0	0	1	1	1	0	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
BPD_transp_2	PF02653.11	gi|557694308|ref|YP_008797362.1|	-	5.8e-35	120.5	35.1	5.8e-35	120.5	24.3	1.5	2	0	0	2	2	2	1	Branched-chain	amino	acid	transport	system	/	permease	component
Bacteriocin_IIc	PF10439.4	gi|557694308|ref|YP_008797362.1|	-	1.9	8.6	15.8	0.077	13.1	2.5	2.6	2	0	0	2	2	2	0	Bacteriocin	class	II	with	double-glycine	leader	peptide
BPD_transp_2	PF02653.11	gi|557694309|ref|YP_008797363.1|	-	2.5e-43	147.9	39.3	2.8e-43	147.8	24.0	2.0	2	0	0	2	2	2	2	Branched-chain	amino	acid	transport	system	/	permease	component
HAMP	PF00672.20	gi|557694309|ref|YP_008797363.1|	-	3.7	7.7	0.0	3.7	7.7	0.0	3.6	4	0	0	4	4	4	0	HAMP	domain
Bmp	PF02608.9	gi|557694310|ref|YP_008797364.1|	-	2e-41	141.7	0.4	1e-24	86.8	0.0	2.1	2	0	0	2	2	2	2	Basic	membrane	protein
Methyltransf_4	PF02390.12	gi|557694310|ref|YP_008797364.1|	-	0.053	12.5	0.0	0.099	11.6	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
BtpA	PF03437.10	gi|557694311|ref|YP_008797365.1|	-	8.7e-70	234.8	0.0	1e-69	234.6	0.0	1.0	1	0	0	1	1	1	1	BtpA	family
Trp_syntA	PF00290.15	gi|557694311|ref|YP_008797365.1|	-	6.2e-05	21.6	0.0	0.00022	19.8	0.0	1.9	2	1	1	3	3	3	1	Tryptophan	synthase	alpha	chain
PcrB	PF01884.12	gi|557694311|ref|YP_008797365.1|	-	0.028	13.6	0.0	0.05	12.8	0.0	1.4	1	0	0	1	1	1	0	PcrB	family
B12-binding	PF02310.14	gi|557694311|ref|YP_008797365.1|	-	0.045	13.6	0.1	0.076	12.8	0.1	1.4	1	0	0	1	1	1	0	B12	binding	domain
TIM	PF00121.13	gi|557694311|ref|YP_008797365.1|	-	0.15	11.0	0.0	0.27	10.2	0.0	1.4	1	0	0	1	1	1	0	Triosephosphate	isomerase
PfkB	PF00294.19	gi|557694312|ref|YP_008797366.1|	-	6.3e-56	189.7	0.1	7e-56	189.5	0.1	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
dCMP_cyt_deam_1	PF00383.17	gi|557694313|ref|YP_008797367.1|	-	9.1e-19	67.0	0.1	1e-18	66.8	0.0	1.0	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
dCMP_cyt_deam_2	PF08211.6	gi|557694313|ref|YP_008797367.1|	-	5.8e-12	45.7	0.4	3.4e-11	43.2	0.1	1.9	2	0	0	2	2	2	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
LmjF365940-deam	PF14421.1	gi|557694313|ref|YP_008797367.1|	-	2.2e-05	23.9	1.8	0.0077	15.6	0.1	2.1	1	1	1	2	2	2	2	A	distinct	subfamily	of	CDD/CDA-like	deaminases
IU_nuc_hydro	PF01156.14	gi|557694314|ref|YP_008797368.1|	-	3.7e-83	279.3	0.0	4e-83	279.1	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
DeoC	PF01791.4	gi|557694315|ref|YP_008797369.1|	-	1.3e-43	148.9	4.4	1.5e-43	148.8	3.1	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DHO_dh	PF01180.16	gi|557694315|ref|YP_008797369.1|	-	0.067	12.1	1.4	0.46	9.3	0.3	2.2	2	1	0	2	2	2	0	Dihydroorotate	dehydrogenase
FMN_dh	PF01070.13	gi|557694315|ref|YP_008797369.1|	-	0.075	11.8	2.8	0.13	11.0	2.0	1.8	1	1	0	1	1	1	0	FMN-dependent	dehydrogenase
Amidohydro_1	PF01979.15	gi|557694315|ref|YP_008797369.1|	-	0.099	12.2	0.0	0.13	11.8	0.0	1.2	1	0	0	1	1	1	0	Amidohydrolase	family
PfkB	PF00294.19	gi|557694316|ref|YP_008797370.1|	-	1.7e-53	181.7	3.0	2.1e-53	181.4	2.1	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|557694316|ref|YP_008797370.1|	-	1.1e-13	50.9	0.1	1.7e-13	50.3	0.0	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Carb_kinase	PF01256.12	gi|557694316|ref|YP_008797370.1|	-	1.8e-09	37.2	0.1	3.3e-09	36.3	0.0	1.4	1	0	0	1	1	1	1	Carbohydrate	kinase
PNP_UDP_1	PF01048.15	gi|557694317|ref|YP_008797371.1|	-	2.8e-38	131.1	0.2	3.5e-38	130.9	0.1	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
PDZ	PF00595.19	gi|557694317|ref|YP_008797371.1|	-	0.14	12.3	0.0	0.26	11.4	0.0	1.4	1	0	0	1	1	1	0	PDZ	domain	(Also	known	as	DHR	or	GLGF)
BtpA	PF03437.10	gi|557694318|ref|YP_008797372.1|	-	2.1e-75	253.2	0.0	2.4e-75	253.0	0.0	1.0	1	0	0	1	1	1	1	BtpA	family
Trp_syntA	PF00290.15	gi|557694318|ref|YP_008797372.1|	-	0.0068	14.9	0.1	0.024	13.1	0.0	1.9	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
NMO	PF03060.10	gi|557694318|ref|YP_008797372.1|	-	0.03	13.4	0.2	0.058	12.5	0.1	1.6	1	1	1	2	2	2	0	Nitronate	monooxygenase
ABC_tran	PF00005.22	gi|557694319|ref|YP_008797373.1|	-	5.4e-49	166.0	0.0	1.6e-29	102.9	0.0	2.4	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|557694319|ref|YP_008797373.1|	-	3.6e-05	23.8	0.7	0.043	13.7	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|557694319|ref|YP_008797373.1|	-	0.014	14.5	0.5	0.2	10.8	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
IstB_IS21	PF01695.12	gi|557694319|ref|YP_008797373.1|	-	0.05	13.0	0.2	11	5.4	0.0	2.5	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_23	PF13476.1	gi|557694319|ref|YP_008797373.1|	-	0.11	12.7	0.1	0.22	11.7	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|557694319|ref|YP_008797373.1|	-	0.13	11.7	0.0	0.4	10.2	0.0	1.8	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|557694319|ref|YP_008797373.1|	-	0.18	11.0	0.4	3.8	6.6	0.2	2.3	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
MmgE_PrpD	PF03972.9	gi|557694320|ref|YP_008797374.1|	-	4.1e-125	417.4	0.0	4.6e-125	417.2	0.0	1.0	1	0	0	1	1	1	1	MmgE/PrpD	family
Citrate_synt	PF00285.16	gi|557694321|ref|YP_008797375.1|	-	9.7e-116	386.3	0.0	1.1e-115	386.2	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
tRNA-synt_1b	PF00579.20	gi|557694322|ref|YP_008797376.1|	-	3.3e-22	78.9	0.0	5.6e-22	78.2	0.0	1.4	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
HEAT_2	PF13646.1	gi|557694322|ref|YP_008797376.1|	-	0.026	14.7	0.0	0.075	13.3	0.0	1.7	2	0	0	2	2	2	0	HEAT	repeats
ABC_tran	PF00005.22	gi|557694323|ref|YP_008797377.1|	-	8.2e-22	77.9	0.0	1.3e-21	77.3	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694323|ref|YP_008797377.1|	-	4.7e-13	49.7	3.6	2.3e-06	27.7	0.2	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694323|ref|YP_008797377.1|	-	4.5e-07	29.3	0.1	0.016	14.4	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|557694323|ref|YP_008797377.1|	-	0.00026	21.3	0.5	0.00048	20.5	0.3	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|557694323|ref|YP_008797377.1|	-	0.00042	18.9	0.4	0.0059	15.1	0.2	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|557694323|ref|YP_008797377.1|	-	0.00087	18.9	0.0	0.0017	18.0	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_15	PF13175.1	gi|557694323|ref|YP_008797377.1|	-	0.0011	18.0	0.3	0.0076	15.3	0.0	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557694323|ref|YP_008797377.1|	-	0.0014	18.7	0.6	0.0078	16.3	0.4	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|557694323|ref|YP_008797377.1|	-	0.0053	16.6	0.2	0.03	14.2	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|557694323|ref|YP_008797377.1|	-	0.0056	16.2	0.0	0.011	15.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557694323|ref|YP_008797377.1|	-	0.0063	16.0	0.0	0.01	15.3	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|557694323|ref|YP_008797377.1|	-	0.0068	16.6	0.0	0.011	15.9	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|557694323|ref|YP_008797377.1|	-	0.0071	15.7	0.0	0.011	15.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|557694323|ref|YP_008797377.1|	-	0.011	14.9	0.1	0.016	14.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|557694323|ref|YP_008797377.1|	-	0.015	15.2	0.0	0.018	15.0	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|557694323|ref|YP_008797377.1|	-	0.018	14.7	0.1	0.034	13.8	0.1	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_24	PF13479.1	gi|557694323|ref|YP_008797377.1|	-	0.028	14.0	0.1	0.049	13.2	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|557694323|ref|YP_008797377.1|	-	0.033	13.0	0.1	0.052	12.4	0.1	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_5	PF07728.9	gi|557694323|ref|YP_008797377.1|	-	0.039	13.6	0.1	0.086	12.5	0.1	1.6	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
NACHT	PF05729.7	gi|557694323|ref|YP_008797377.1|	-	0.044	13.4	1.7	0.045	13.4	0.3	1.6	2	0	0	2	2	2	0	NACHT	domain
AAA_10	PF12846.2	gi|557694323|ref|YP_008797377.1|	-	0.067	12.6	0.1	1.3	8.4	0.1	2.1	2	0	0	2	2	2	0	AAA-like	domain
SbcCD_C	PF13558.1	gi|557694323|ref|YP_008797377.1|	-	0.072	13.0	0.1	1.1	9.2	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
NTPase_1	PF03266.10	gi|557694323|ref|YP_008797377.1|	-	0.092	12.4	0.1	0.19	11.4	0.1	1.5	1	0	0	1	1	1	0	NTPase
DUF815	PF05673.8	gi|557694323|ref|YP_008797377.1|	-	0.12	11.2	0.0	0.17	10.7	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
SRP54	PF00448.17	gi|557694323|ref|YP_008797377.1|	-	0.15	11.5	0.2	0.26	10.7	0.2	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Miro	PF08477.8	gi|557694323|ref|YP_008797377.1|	-	0.16	12.5	0.0	0.25	11.8	0.0	1.3	1	0	0	1	1	1	0	Miro-like	protein
MobB	PF03205.9	gi|557694323|ref|YP_008797377.1|	-	0.16	11.6	0.8	0.26	10.9	0.6	1.3	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_ATPase	PF09818.4	gi|557694323|ref|YP_008797377.1|	-	0.26	9.8	2.1	0.25	9.9	0.2	1.7	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
cobW	PF02492.14	gi|557694323|ref|YP_008797377.1|	-	0.35	10.2	1.1	0.64	9.4	0.4	1.6	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF4514	PF14986.1	gi|557694324|ref|YP_008797378.1|	-	0.12	12.2	0.2	0.12	12.2	0.2	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4514)
BPD_transp_1	PF00528.17	gi|557694324|ref|YP_008797378.1|	-	0.13	11.8	31.9	0.0098	15.4	17.7	2.0	2	0	0	2	2	2	0	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_11	PF13531.1	gi|557694325|ref|YP_008797379.1|	-	6.8e-06	25.8	0.0	5.4e-05	22.9	0.0	2.0	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
TOBE	PF03459.12	gi|557694326|ref|YP_008797380.1|	-	1.7e-14	53.6	0.2	3.9e-14	52.5	0.0	1.7	2	0	0	2	2	2	1	TOBE	domain
HTH_29	PF13551.1	gi|557694326|ref|YP_008797380.1|	-	0.00034	20.7	0.0	0.00046	20.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
DUF2764	PF10962.3	gi|557694326|ref|YP_008797380.1|	-	0.0023	17.2	0.0	0.0034	16.6	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2764)
HTH_28	PF13518.1	gi|557694326|ref|YP_008797380.1|	-	0.0037	17.2	0.1	0.0062	16.5	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
TOBE_2	PF08402.5	gi|557694326|ref|YP_008797380.1|	-	0.015	15.2	0.0	0.029	14.3	0.0	1.4	1	0	0	1	1	1	0	TOBE	domain
HTH_23	PF13384.1	gi|557694326|ref|YP_008797380.1|	-	0.018	14.6	0.0	0.036	13.7	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_1	PF00126.22	gi|557694326|ref|YP_008797380.1|	-	0.023	14.4	0.0	0.047	13.4	0.0	1.6	1	1	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_45	PF14947.1	gi|557694326|ref|YP_008797380.1|	-	0.13	12.1	0.0	0.26	11.1	0.0	1.6	1	1	0	1	1	1	0	Winged	helix-turn-helix
Semialdhyde_dhC	PF02774.13	gi|557694327|ref|YP_008797381.1|	-	1e-34	119.9	0.0	1.7e-34	119.2	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Semialdhyde_dh	PF01118.19	gi|557694327|ref|YP_008797381.1|	-	1.2e-31	109.4	0.0	2.5e-31	108.5	0.0	1.5	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|557694327|ref|YP_008797381.1|	-	0.00055	20.4	0.0	0.0021	18.5	0.0	1.9	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Gp_dh_C	PF02800.15	gi|557694327|ref|YP_008797381.1|	-	0.0015	17.9	0.2	0.032	13.7	0.0	2.4	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DXP_reductoisom	PF02670.11	gi|557694327|ref|YP_008797381.1|	-	0.019	15.5	0.0	0.034	14.6	0.0	1.4	1	0	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
DapB_N	PF01113.15	gi|557694327|ref|YP_008797381.1|	-	0.08	12.8	0.0	0.19	11.6	0.0	1.7	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
DeoC	PF01791.4	gi|557694328|ref|YP_008797382.1|	-	6.1e-41	140.2	0.0	7e-41	140.0	0.0	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
TMP-TENI	PF02581.12	gi|557694328|ref|YP_008797382.1|	-	0.0016	17.5	0.1	1.1	8.3	0.0	2.3	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase/TENI
DHQS	PF01959.11	gi|557694329|ref|YP_008797383.1|	-	6.1e-107	357.3	2.2	7e-107	357.1	1.5	1.0	1	0	0	1	1	1	1	3-dehydroquinate	synthase	(EC	4.6.1.3)
Response_reg	PF00072.19	gi|557694329|ref|YP_008797383.1|	-	0.018	15.0	0.1	4.4	7.3	0.0	3.1	2	1	1	3	3	3	0	Response	regulator	receiver	domain
Hint	PF01079.15	gi|557694329|ref|YP_008797383.1|	-	0.02	14.1	0.0	0.038	13.2	0.0	1.4	1	0	0	1	1	1	0	Hint	module
PGDYG	PF14083.1	gi|557694329|ref|YP_008797383.1|	-	0.032	14.5	0.0	0.097	13.0	0.0	1.8	2	0	0	2	2	2	0	PGDYG	protein
PEGA	PF08308.6	gi|557694329|ref|YP_008797383.1|	-	0.037	13.8	0.0	0.11	12.3	0.0	1.8	2	0	0	2	2	2	0	PEGA	domain
Pyr_redox_2	PF07992.9	gi|557694329|ref|YP_008797383.1|	-	0.12	12.1	0.1	0.27	11.0	0.0	1.4	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
DHquinase_I	PF01487.10	gi|557694330|ref|YP_008797384.1|	-	6.6e-45	153.4	0.0	7.4e-45	153.3	0.0	1.0	1	0	0	1	1	1	1	Type	I	3-dehydroquinase
Shikimate_dh_N	PF08501.6	gi|557694331|ref|YP_008797385.1|	-	1.3e-17	63.5	0.0	6.1e-17	61.4	0.0	2.0	2	0	0	2	2	2	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.15	gi|557694331|ref|YP_008797385.1|	-	2e-06	27.9	0.0	5.4e-06	26.5	0.0	1.6	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
GHMP_kinases_N	PF00288.21	gi|557694332|ref|YP_008797386.1|	-	3.5e-11	42.9	3.3	3.5e-11	42.9	2.3	2.9	3	1	0	3	3	3	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|557694332|ref|YP_008797386.1|	-	0.0012	18.9	1.8	0.0014	18.7	0.3	1.8	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
DUF1269	PF06897.7	gi|557694332|ref|YP_008797386.1|	-	0.13	12.2	2.0	0.61	10.1	0.1	2.7	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF1269)
EPSP_synthase	PF00275.15	gi|557694333|ref|YP_008797387.1|	-	9.6e-105	350.3	0.1	1.2e-104	350.0	0.1	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
TraG_N	PF07916.6	gi|557694334|ref|YP_008797388.1|	-	0.046	12.1	2.3	0.05	12.0	1.6	1.0	1	0	0	1	1	1	0	TraG-like	protein,	N-terminal	region
COX2_TM	PF02790.10	gi|557694334|ref|YP_008797388.1|	-	0.35	10.8	3.9	0.14	12.1	0.8	1.7	1	1	1	2	2	2	0	Cytochrome	C	oxidase	subunit	II,	transmembrane	domain
DUF4064	PF13273.1	gi|557694334|ref|YP_008797388.1|	-	0.57	10.3	6.7	2.4	8.2	4.6	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
DUF2207	PF09972.4	gi|557694334|ref|YP_008797388.1|	-	0.76	8.2	4.9	0.78	8.2	3.4	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF2628	PF10947.3	gi|557694334|ref|YP_008797388.1|	-	1.7	8.4	6.3	2	8.2	4.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2628)
FA_desaturase	PF00487.19	gi|557694334|ref|YP_008797388.1|	-	5.4	6.3	6.2	6.1	6.2	4.3	1.0	1	0	0	1	1	1	0	Fatty	acid	desaturase
DUF3119	PF11317.3	gi|557694335|ref|YP_008797389.1|	-	0.00087	19.3	2.8	0.24	11.4	0.3	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3119)
Glucos_trans_II	PF14264.1	gi|557694335|ref|YP_008797389.1|	-	0.016	14.1	3.3	0.025	13.5	2.3	1.2	1	0	0	1	1	1	0	Glucosyl	transferase	GtrII
Polysacc_synt_3	PF13440.1	gi|557694335|ref|YP_008797389.1|	-	0.041	13.3	2.3	0.054	12.9	1.6	1.1	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
DUF687	PF05095.7	gi|557694335|ref|YP_008797389.1|	-	0.061	11.6	0.3	0.075	11.3	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF687)
ECF-ribofla_trS	PF07155.7	gi|557694336|ref|YP_008797390.1|	-	0.00042	20.0	10.8	0.00042	20.0	7.5	2.2	1	1	1	2	2	2	1	ECF-type	riboflavin	transporter,	S	component
GHMP_kinases_N	PF00288.21	gi|557694337|ref|YP_008797391.1|	-	1.3e-06	28.3	0.1	2.7e-06	27.3	0.1	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
MAF_flag10	PF01973.13	gi|557694338|ref|YP_008797392.1|	-	3.9e-28	98.0	0.0	5.7e-28	97.5	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
TPK_catalytic	PF04263.11	gi|557694338|ref|YP_008797392.1|	-	0.001	18.6	0.1	0.42	10.2	0.1	2.3	2	0	0	2	2	2	2	Thiamin	pyrophosphokinase,	catalytic	domain
HipA_C	PF07804.7	gi|557694338|ref|YP_008797392.1|	-	0.036	14.1	0.0	0.086	12.9	0.0	1.5	1	0	0	1	1	1	0	HipA-like	C-terminal	domain
GCHY-1	PF02649.9	gi|557694339|ref|YP_008797393.1|	-	7.5e-52	176.2	0.1	8.6e-52	176.0	0.1	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
DNA_ligase_A_M	PF01068.16	gi|557694340|ref|YP_008797394.1|	-	1.7e-57	194.0	0.2	2.5e-57	193.5	0.1	1.3	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|557694340|ref|YP_008797394.1|	-	2.3e-51	174.1	0.1	4.7e-51	173.1	0.0	1.5	1	1	0	1	1	1	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|557694340|ref|YP_008797394.1|	-	1.8e-23	82.7	0.1	5.1e-23	81.3	0.0	1.9	2	0	0	2	2	2	1	ATP	dependent	DNA	ligase	C	terminal	region
Lipid_DES	PF08557.5	gi|557694340|ref|YP_008797394.1|	-	0.13	11.5	0.4	3.7	6.8	0.0	3.0	3	0	0	3	3	3	0	Sphingolipid	Delta4-desaturase	(DES)
DNA_ligase_OB_2	PF14743.1	gi|557694340|ref|YP_008797394.1|	-	0.16	11.6	0.7	0.32	10.6	0.0	1.9	2	0	0	2	2	2	0	DNA	ligase	OB-like	domain
DUF131	PF01998.12	gi|557694341|ref|YP_008797395.1|	-	0.0034	16.7	4.3	0.0034	16.7	3.0	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
Baculo_11_kDa	PF06143.6	gi|557694341|ref|YP_008797395.1|	-	0.1	11.9	6.6	0.18	11.2	0.1	2.1	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
Virul_fac_BrkB	PF03631.10	gi|557694341|ref|YP_008797395.1|	-	0.12	11.6	9.9	0.13	11.6	6.8	1.0	1	0	0	1	1	1	0	Virulence	factor	BrkB
DUF4118	PF13493.1	gi|557694341|ref|YP_008797395.1|	-	0.88	9.8	8.9	0.99	9.6	6.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4118)
ABC2_membrane_2	PF12679.2	gi|557694341|ref|YP_008797395.1|	-	2.2	7.0	10.1	2.6	6.8	7.0	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Na_Ca_ex	PF01699.19	gi|557694341|ref|YP_008797395.1|	-	2.7	7.6	8.8	0.079	12.5	0.9	1.9	1	1	1	2	2	2	0	Sodium/calcium	exchanger	protein
O-ag_pol_Wzy	PF14296.1	gi|557694341|ref|YP_008797395.1|	-	2.9	6.3	6.2	3.2	6.2	4.3	1.0	1	0	0	1	1	1	0	O-antigen	polysaccharide	polymerase	Wzy
TrmB	PF01978.14	gi|557694342|ref|YP_008797396.1|	-	3.5e-24	84.2	0.4	2.1e-23	81.8	0.0	2.1	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Regulator_TrmB	PF11495.3	gi|557694342|ref|YP_008797396.1|	-	4e-08	32.5	0.2	6.1e-08	31.9	0.1	1.3	1	0	0	1	1	1	1	Archaeal	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|557694342|ref|YP_008797396.1|	-	0.00062	19.8	0.0	0.0018	18.3	0.0	1.8	1	0	0	1	1	1	1	Transcriptional	regulator
Penicillinase_R	PF03965.11	gi|557694342|ref|YP_008797396.1|	-	0.0015	18.6	0.0	0.0044	17.0	0.0	1.9	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_IclR	PF09339.5	gi|557694342|ref|YP_008797396.1|	-	0.022	14.3	0.0	0.049	13.2	0.0	1.6	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
PadR	PF03551.9	gi|557694342|ref|YP_008797396.1|	-	0.083	12.6	0.0	0.18	11.5	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.1	gi|557694342|ref|YP_008797396.1|	-	0.12	12.6	0.0	0.32	11.3	0.0	1.7	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
QueT	PF06177.6	gi|557694343|ref|YP_008797397.1|	-	3.9e-27	95.1	17.5	4.4e-27	94.9	12.1	1.1	1	0	0	1	1	1	1	QueT	transporter
KaiC	PF06745.8	gi|557694344|ref|YP_008797398.1|	-	7.9e-19	67.6	0.0	9.8e-19	67.3	0.0	1.1	1	0	0	1	1	1	1	KaiC
AAA_17	PF13207.1	gi|557694344|ref|YP_008797398.1|	-	4.6e-05	24.2	0.0	7.6e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|557694344|ref|YP_008797398.1|	-	0.0003	20.8	0.2	0.00066	19.7	0.2	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|557694344|ref|YP_008797398.1|	-	0.00071	19.0	0.0	0.0011	18.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557694344|ref|YP_008797398.1|	-	0.00095	18.8	0.1	0.0027	17.4	0.1	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_10	PF12846.2	gi|557694344|ref|YP_008797398.1|	-	0.0021	17.5	0.0	0.0033	16.9	0.0	1.3	1	1	0	1	1	1	1	AAA-like	domain
ABC_tran	PF00005.22	gi|557694344|ref|YP_008797398.1|	-	0.003	17.8	0.0	0.0044	17.3	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
MobB	PF03205.9	gi|557694344|ref|YP_008797398.1|	-	0.0073	16.0	0.0	0.014	15.1	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|557694344|ref|YP_008797398.1|	-	0.011	15.6	0.0	0.017	15.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|557694344|ref|YP_008797398.1|	-	0.024	14.3	0.1	0.22	11.1	0.0	2.2	1	1	0	1	1	1	0	NACHT	domain
AAA_29	PF13555.1	gi|557694344|ref|YP_008797398.1|	-	0.036	13.5	0.0	0.097	12.2	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|557694344|ref|YP_008797398.1|	-	0.069	13.2	0.0	0.13	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|557694344|ref|YP_008797398.1|	-	0.077	12.1	0.0	0.12	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
ATP_bind_1	PF03029.12	gi|557694344|ref|YP_008797398.1|	-	0.1	12.1	0.0	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
IstB_IS21	PF01695.12	gi|557694344|ref|YP_008797398.1|	-	0.12	11.7	0.0	0.22	10.9	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
SRP54	PF00448.17	gi|557694344|ref|YP_008797398.1|	-	0.13	11.7	0.0	0.21	11.0	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
HEPN	PF05168.9	gi|557694345|ref|YP_008797399.1|	-	4.4e-25	87.8	0.1	5.1e-25	87.6	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
TPR_11	PF13414.1	gi|557694345|ref|YP_008797399.1|	-	0.017	14.7	0.0	0.029	13.9	0.0	1.5	1	1	0	1	1	1	0	TPR	repeat
TPR_2	PF07719.12	gi|557694345|ref|YP_008797399.1|	-	0.05	13.5	0.2	0.28	11.1	0.0	2.2	2	1	0	3	3	3	0	Tetratricopeptide	repeat
NTP_transf_2	PF01909.18	gi|557694346|ref|YP_008797400.1|	-	1.8e-11	44.2	0.0	2.1e-11	44.0	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|557694346|ref|YP_008797400.1|	-	0.00057	19.5	0.0	0.00083	18.9	0.0	1.3	1	0	0	1	1	1	1	Putative	nucleotidyltransferase	DUF294
DNA_pol_B_palm	PF14792.1	gi|557694346|ref|YP_008797400.1|	-	0.0082	16.1	0.0	0.01	15.9	0.0	1.1	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
V-SNARE	PF05008.10	gi|557694346|ref|YP_008797400.1|	-	0.032	14.3	0.5	0.056	13.6	0.1	1.6	2	0	0	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
DUF4279	PF14106.1	gi|557694346|ref|YP_008797400.1|	-	0.041	13.7	0.0	0.054	13.3	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4279)
Peripla_BP_2	PF01497.13	gi|557694346|ref|YP_008797400.1|	-	0.12	11.5	0.0	0.16	11.0	0.0	1.2	1	0	0	1	1	1	0	Periplasmic	binding	protein
Radical_SAM	PF04055.16	gi|557694347|ref|YP_008797401.1|	-	6.6e-23	81.6	0.1	6.6e-23	81.6	0.1	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|557694347|ref|YP_008797401.1|	-	1.6e-08	34.7	0.0	3.6e-08	33.6	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|557694347|ref|YP_008797401.1|	-	2.4e-08	34.0	0.0	2.4e-08	34.0	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
KaiC	PF06745.8	gi|557694348|ref|YP_008797402.1|	-	1.7e-07	30.6	0.0	3.3e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	KaiC
ChlI	PF13541.1	gi|557694348|ref|YP_008797402.1|	-	2e-06	27.3	0.0	5.2e-06	25.9	0.0	1.7	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
AAA_25	PF13481.1	gi|557694348|ref|YP_008797402.1|	-	0.0031	16.9	0.0	0.0054	16.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
EF-1_beta_acid	PF10587.4	gi|557694348|ref|YP_008797402.1|	-	0.5	10.5	4.2	1.5	9.0	1.3	2.4	2	0	0	2	2	2	0	Eukaryotic	elongation	factor	1	beta	central	acidic	region
LAGLIDADG_3	PF14528.1	gi|557694350|ref|YP_008797404.1|	-	0.00074	19.7	0.0	0.054	13.7	0.0	2.5	2	0	0	2	2	2	1	LAGLIDADG-like	domain
NERD	PF08378.6	gi|557694350|ref|YP_008797404.1|	-	0.093	13.0	0.0	0.23	11.7	0.0	1.8	1	0	0	1	1	1	0	Nuclease-related	domain
Phage_int_SAM_4	PF13495.1	gi|557694350|ref|YP_008797404.1|	-	0.1	12.9	0.3	1.1	9.6	0.0	2.5	2	0	0	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
DUF3681	PF12442.3	gi|557694351|ref|YP_008797405.1|	-	0.0054	16.8	0.2	0.012	15.7	0.2	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3681)
HemN_C	PF06969.11	gi|557694351|ref|YP_008797405.1|	-	0.0059	16.6	0.2	0.016	15.2	0.2	1.7	1	0	0	1	1	1	1	HemN	C-terminal	domain
HTH_45	PF14947.1	gi|557694351|ref|YP_008797405.1|	-	0.13	12.0	0.4	0.75	9.6	0.1	2.1	1	1	1	2	2	2	0	Winged	helix-turn-helix
DUF217	PF02697.9	gi|557694353|ref|YP_008797407.1|	-	5.4e-19	68.2	0.2	5.8e-19	68.1	0.1	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
SeqA	PF03925.8	gi|557694353|ref|YP_008797407.1|	-	0.007	16.0	0.0	0.0077	15.9	0.0	1.0	1	0	0	1	1	1	1	SeqA	protein
PIN	PF01850.16	gi|557694354|ref|YP_008797408.1|	-	7.5e-07	29.5	0.1	7.5e-07	29.5	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
Pterin_4a	PF01329.14	gi|557694355|ref|YP_008797409.1|	-	6.7e-34	115.5	0.2	7.9e-34	115.3	0.1	1.1	1	0	0	1	1	1	1	Pterin	4	alpha	carbinolamine	dehydratase
PAG	PF15347.1	gi|557694355|ref|YP_008797409.1|	-	0.02	14.0	0.0	0.023	13.7	0.0	1.1	1	0	0	1	1	1	0	Phosphoprotein	associated	with	glycosphingolipid-enriched
Glycos_transf_3	PF00591.16	gi|557694356|ref|YP_008797410.1|	-	1.3e-72	244.3	0.0	1.6e-72	243.9	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.12	gi|557694356|ref|YP_008797410.1|	-	6.2e-14	51.3	0.0	2e-13	49.6	0.0	1.9	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
DUF3349	PF11829.3	gi|557694356|ref|YP_008797410.1|	-	0.029	14.8	0.1	0.26	11.7	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3349)
IGPS	PF00218.16	gi|557694357|ref|YP_008797411.1|	-	9.6e-48	162.4	0.0	1.1e-47	162.2	0.0	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
DUF2787	PF10980.3	gi|557694357|ref|YP_008797411.1|	-	0.02	14.8	0.0	0.028	14.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2787)
His_biosynth	PF00977.16	gi|557694357|ref|YP_008797411.1|	-	0.07	12.3	0.0	10	5.3	0.0	2.1	2	0	0	2	2	2	0	Histidine	biosynthesis	protein
PRAI	PF00697.17	gi|557694358|ref|YP_008797412.1|	-	5.9e-27	94.5	0.0	7e-27	94.2	0.0	1.1	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
PALP	PF00291.20	gi|557694359|ref|YP_008797413.1|	-	8.6e-45	153.2	0.1	1e-44	153.0	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Trp_syntA	PF00290.15	gi|557694360|ref|YP_008797414.1|	-	1.1e-36	125.7	0.0	1.4e-36	125.3	0.0	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
ThiG	PF05690.9	gi|557694360|ref|YP_008797414.1|	-	0.0065	15.5	0.4	0.01	14.9	0.3	1.2	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
HMGL-like	PF00682.14	gi|557694360|ref|YP_008797414.1|	-	0.043	13.4	0.0	0.13	11.8	0.0	1.8	1	1	1	2	2	2	0	HMGL-like
His_biosynth	PF00977.16	gi|557694360|ref|YP_008797414.1|	-	0.12	11.6	0.2	0.23	10.7	0.1	1.4	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|557694360|ref|YP_008797414.1|	-	0.14	11.3	0.2	0.46	9.6	0.1	1.7	2	0	0	2	2	2	0	PcrB	family
PIN	PF01850.16	gi|557694363|ref|YP_008797417.1|	-	4.9e-09	36.5	0.2	5.7e-09	36.3	0.2	1.1	1	0	0	1	1	1	1	PIN	domain
Cas_NE0113	PF09623.5	gi|557694365|ref|YP_008797419.1|	-	1.3e-20	73.8	0.3	2.8e-20	72.7	0.2	1.5	1	1	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_Cas02710	PF09670.5	gi|557694365|ref|YP_008797419.1|	-	0.00017	20.3	0.0	0.00023	19.9	0.0	1.2	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
Cas_APE2256	PF09651.5	gi|557694365|ref|YP_008797419.1|	-	0.00037	20.2	0.1	0.0006	19.5	0.1	1.4	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_APE2256)
ADP_ribosyl_GH	PF03747.9	gi|557694366|ref|YP_008797420.1|	-	0.035	13.8	0.5	0.062	13.0	0.3	1.3	1	0	0	1	1	1	0	ADP-ribosylglycohydrolase
DUF4398	PF14346.1	gi|557694366|ref|YP_008797420.1|	-	0.052	13.5	3.1	0.15	12.1	2.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
DNA_primase_lrg	PF04104.9	gi|557694368|ref|YP_008797422.1|	-	1.1e-24	87.1	0.1	1.9e-24	86.3	0.1	1.4	1	0	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
COG6	PF06419.6	gi|557694368|ref|YP_008797422.1|	-	0.014	13.5	0.0	0.028	12.5	0.0	1.5	1	0	0	1	1	1	0	Conserved	oligomeric	complex	COG6
Hep_core_N	PF08290.6	gi|557694368|ref|YP_008797422.1|	-	0.032	13.6	0.1	0.065	12.6	0.1	1.4	1	0	0	1	1	1	0	Hepatitis	core	protein,	putative	zinc	finger
AAA_10	PF12846.2	gi|557694369|ref|YP_008797423.1|	-	8.3e-17	61.5	0.0	1.7e-08	34.3	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
DUF87	PF01935.12	gi|557694369|ref|YP_008797423.1|	-	3e-10	40.2	0.0	6.2e-10	39.2	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
TrwB_AAD_bind	PF10412.4	gi|557694369|ref|YP_008797423.1|	-	2.1e-07	29.9	0.0	3.7e-07	29.1	0.0	1.3	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
MobB	PF03205.9	gi|557694369|ref|YP_008797423.1|	-	9.4e-07	28.6	0.0	1.9e-06	27.6	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|557694369|ref|YP_008797423.1|	-	5.2e-06	26.5	0.1	9.2e-06	25.7	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF853	PF05872.7	gi|557694369|ref|YP_008797423.1|	-	1.7e-05	23.4	0.0	0.00012	20.5	0.0	2.1	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF853)
T2SE	PF00437.15	gi|557694369|ref|YP_008797423.1|	-	2.3e-05	23.4	0.0	4e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
FtsK_SpoIIIE	PF01580.13	gi|557694369|ref|YP_008797423.1|	-	0.00027	20.5	0.0	0.00047	19.6	0.0	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|557694369|ref|YP_008797423.1|	-	0.0004	20.5	0.0	0.027	14.6	0.0	2.5	2	1	0	2	2	2	1	AAA	domain
DUF815	PF05673.8	gi|557694369|ref|YP_008797423.1|	-	0.00066	18.6	0.0	0.001	18.0	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
Arch_ATPase	PF01637.13	gi|557694369|ref|YP_008797423.1|	-	0.0017	18.1	0.1	0.01	15.5	0.0	2.1	1	1	0	1	1	1	1	Archaeal	ATPase
NTPase_1	PF03266.10	gi|557694369|ref|YP_008797423.1|	-	0.0049	16.5	0.2	0.028	14.1	0.0	2.1	2	0	0	2	2	2	1	NTPase
LpxK	PF02606.9	gi|557694369|ref|YP_008797423.1|	-	0.0073	15.3	0.0	0.012	14.5	0.0	1.2	1	0	0	1	1	1	1	Tetraacyldisaccharide-1-P	4'-kinase
Zeta_toxin	PF06414.7	gi|557694369|ref|YP_008797423.1|	-	0.01	14.9	0.0	0.02	13.9	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
cobW	PF02492.14	gi|557694369|ref|YP_008797423.1|	-	0.014	14.8	0.0	0.026	13.9	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_5	PF07728.9	gi|557694369|ref|YP_008797423.1|	-	0.02	14.6	0.0	0.046	13.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.1	gi|557694369|ref|YP_008797423.1|	-	0.02	14.4	0.0	0.042	13.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|557694369|ref|YP_008797423.1|	-	0.023	15.1	0.1	0.047	14.1	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_17	PF13207.1	gi|557694369|ref|YP_008797423.1|	-	0.039	14.7	0.1	0.11	13.3	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
PhoH	PF02562.11	gi|557694369|ref|YP_008797423.1|	-	0.042	13.0	0.0	0.44	9.7	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
ATP_bind_1	PF03029.12	gi|557694369|ref|YP_008797423.1|	-	0.056	12.9	0.0	0.093	12.2	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA	PF00004.24	gi|557694369|ref|YP_008797423.1|	-	0.061	13.5	0.0	2.4	8.3	0.0	2.5	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ArgK	PF03308.11	gi|557694369|ref|YP_008797423.1|	-	0.087	11.5	0.0	0.16	10.6	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
AAA_29	PF13555.1	gi|557694369|ref|YP_008797423.1|	-	0.093	12.2	0.0	0.2	11.1	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
RMP	PF14996.1	gi|557694369|ref|YP_008797423.1|	-	0.11	12.4	0.0	0.16	11.8	0.0	1.3	1	0	0	1	1	1	0	Retinal	Maintenance
AAA_19	PF13245.1	gi|557694369|ref|YP_008797423.1|	-	0.11	12.2	0.0	0.27	11.0	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
SRP54	PF00448.17	gi|557694369|ref|YP_008797423.1|	-	0.11	11.9	0.0	0.21	11.0	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
PduV-EutP	PF10662.4	gi|557694369|ref|YP_008797423.1|	-	0.12	11.8	0.0	0.21	11.0	0.0	1.4	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
NACHT	PF05729.7	gi|557694369|ref|YP_008797423.1|	-	0.12	12.0	0.0	0.24	11.0	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
ResIII	PF04851.10	gi|557694369|ref|YP_008797423.1|	-	0.12	12.1	0.0	0.31	10.8	0.0	1.6	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
Zot	PF05707.7	gi|557694369|ref|YP_008797423.1|	-	0.17	11.3	0.0	11	5.3	0.0	2.2	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
PrsW-protease	PF13367.1	gi|557694370|ref|YP_008797424.1|	-	0.045	12.9	2.5	0.05	12.7	1.7	1.1	1	0	0	1	1	1	0	Protease	prsW	family
Bac_export_1	PF01311.15	gi|557694370|ref|YP_008797424.1|	-	0.076	12.2	3.6	0.081	12.1	2.5	1.1	1	0	0	1	1	1	0	Bacterial	export	proteins,	family	1
BTP	PF05232.7	gi|557694370|ref|YP_008797424.1|	-	0.63	9.8	3.6	0.96	9.2	2.0	1.7	1	1	1	2	2	2	0	Bacterial	Transmembrane	Pair	family
DUF3082	PF11282.3	gi|557694370|ref|YP_008797424.1|	-	4.6	7.3	7.0	1.1	9.3	1.9	2.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3082)
DUF1887	PF09002.6	gi|557694371|ref|YP_008797425.1|	-	0.0083	14.5	0.0	0.012	14.0	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1887)
IFT20	PF14931.1	gi|557694372|ref|YP_008797426.1|	-	0.065	13.1	0.0	0.1	12.4	0.0	1.3	1	0	0	1	1	1	0	Intraflagellar	transport	complex	B,	subunit	20
SMC_N	PF02463.14	gi|557694373|ref|YP_008797427.1|	-	1.9e-26	92.6	0.0	3.1e-25	88.7	0.0	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|557694373|ref|YP_008797427.1|	-	4.7e-24	85.8	0.2	4.7e-24	85.8	0.1	3.3	2	1	0	2	2	1	1	AAA	domain
AAA_21	PF13304.1	gi|557694373|ref|YP_008797427.1|	-	6e-14	52.6	0.0	5.6e-07	29.8	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|557694373|ref|YP_008797427.1|	-	2.9e-10	39.7	0.0	1.3e-05	24.4	0.0	2.4	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_27	PF13514.1	gi|557694373|ref|YP_008797427.1|	-	1.1e-08	33.4	45.9	0.00049	17.9	0.0	4.3	3	1	0	4	4	4	4	AAA	domain
AAA_29	PF13555.1	gi|557694373|ref|YP_008797427.1|	-	2.1e-08	33.5	0.0	3.8e-08	32.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.1	gi|557694373|ref|YP_008797427.1|	-	5.1e-08	32.7	0.0	1.2e-07	31.5	0.0	1.6	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
ABC_tran	PF00005.22	gi|557694373|ref|YP_008797427.1|	-	1.5e-05	25.2	0.2	0.043	14.1	0.3	3.6	2	2	0	2	2	2	1	ABC	transporter
AAA_13	PF13166.1	gi|557694373|ref|YP_008797427.1|	-	1.7e-05	23.5	15.7	0.0059	15.1	1.9	4.4	4	1	0	4	4	4	2	AAA	domain
Seryl_tRNA_N	PF02403.17	gi|557694373|ref|YP_008797427.1|	-	0.00028	20.8	36.0	0.26	11.2	2.3	5.5	3	2	2	5	5	5	4	Seryl-tRNA	synthetase	N-terminal	domain
Syntaxin_2	PF14523.1	gi|557694373|ref|YP_008797427.1|	-	0.015	15.3	11.9	0.35	10.9	0.0	4.5	3	1	0	3	3	3	0	Syntaxin-like	protein
Med4	PF10018.4	gi|557694373|ref|YP_008797427.1|	-	0.016	14.6	0.5	0.016	14.6	0.4	4.2	5	0	0	5	5	5	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
DUF258	PF03193.11	gi|557694373|ref|YP_008797427.1|	-	0.053	12.7	0.0	0.13	11.4	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
IncA	PF04156.9	gi|557694373|ref|YP_008797427.1|	-	0.081	12.5	50.2	0.098	12.2	15.3	4.3	2	2	2	4	4	4	0	IncA	protein
DivIC	PF04977.10	gi|557694373|ref|YP_008797427.1|	-	0.096	12.1	31.8	0.018	14.5	2.2	5.7	5	0	0	5	5	5	0	Septum	formation	initiator
Halogen_Hydrol	PF10112.4	gi|557694373|ref|YP_008797427.1|	-	0.096	12.0	4.3	0.59	9.5	0.5	2.7	2	0	0	2	2	2	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
AAA_25	PF13481.1	gi|557694373|ref|YP_008797427.1|	-	0.18	11.2	0.0	0.18	11.2	0.0	4.3	5	1	0	5	5	5	0	AAA	domain
Spc7	PF08317.6	gi|557694373|ref|YP_008797427.1|	-	0.25	9.9	33.7	0.057	12.0	2.7	3.9	2	1	2	4	4	4	0	Spc7	kinetochore	protein
STAT_alpha	PF01017.15	gi|557694373|ref|YP_008797427.1|	-	0.57	9.8	9.0	2.6	7.7	0.6	3.6	3	2	0	3	3	3	0	STAT	protein,	all-alpha	domain
DUF3829	PF12889.2	gi|557694373|ref|YP_008797427.1|	-	1.7	7.8	7.8	6.3	5.8	0.0	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3829)
ADIP	PF11559.3	gi|557694373|ref|YP_008797427.1|	-	3.1	7.6	25.8	9	6.1	0.1	4.5	4	0	0	4	4	4	0	Afadin-	and	alpha	-actinin-Binding
Atg14	PF10186.4	gi|557694373|ref|YP_008797427.1|	-	5.3	5.8	31.6	0.1	11.4	4.0	4.1	3	1	1	4	4	4	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Fib_alpha	PF08702.5	gi|557694373|ref|YP_008797427.1|	-	5.5	7.1	11.9	7.3	6.7	0.1	4.2	3	1	1	4	4	4	0	Fibrinogen	alpha/beta	chain	family
AAA_22	PF13401.1	gi|557694373|ref|YP_008797427.1|	-	6.7	6.8	6.8	3.4	7.8	0.0	3.6	3	1	0	4	4	4	0	AAA	domain
tRNA-synt_His	PF13393.1	gi|557694373|ref|YP_008797427.1|	-	9.2	5.2	22.0	0.32	10.0	0.4	5.0	3	3	3	6	6	6	0	Histidyl-tRNA	synthetase
FlaC_arch	PF05377.6	gi|557694373|ref|YP_008797427.1|	-	9.3	6.2	18.4	12	5.9	0.7	5.5	4	2	1	5	5	4	0	Flagella	accessory	protein	C	(FlaC)
Metallophos_2	PF12850.2	gi|557694374|ref|YP_008797428.1|	-	1.7e-13	50.6	0.3	5.6e-13	49.0	0.2	1.9	2	1	0	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|557694374|ref|YP_008797428.1|	-	5.3e-09	35.7	1.2	2.1e-08	33.7	0.8	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
TmoB	PF06234.7	gi|557694374|ref|YP_008797428.1|	-	0.02	14.7	0.1	1.6	8.6	0.0	2.6	2	0	0	2	2	2	0	Toluene-4-monooxygenase	system	protein	B	(TmoB)
GCV_T	PF01571.16	gi|557694374|ref|YP_008797428.1|	-	0.083	12.2	0.0	0.17	11.2	0.0	1.4	1	0	0	1	1	1	0	Aminomethyltransferase	folate-binding	domain
Tnp_DNA_bind	PF14706.1	gi|557694374|ref|YP_008797428.1|	-	0.15	11.7	0.0	1.3	8.7	0.0	2.2	2	0	0	2	2	2	0	Transposase	DNA-binding
DUF87	PF01935.12	gi|557694375|ref|YP_008797429.1|	-	9.9e-35	120.4	0.9	1.4e-34	119.9	0.6	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|557694375|ref|YP_008797429.1|	-	2.1e-19	70.0	0.1	9.2e-17	61.4	0.1	2.2	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|557694375|ref|YP_008797429.1|	-	1.6e-07	30.9	0.0	4.4e-07	29.5	0.0	1.7	1	1	0	1	1	1	1	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|557694375|ref|YP_008797429.1|	-	0.00023	19.9	0.1	0.0075	14.9	0.0	2.5	3	0	0	3	3	3	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF853	PF05872.7	gi|557694375|ref|YP_008797429.1|	-	0.00038	18.9	0.1	0.035	12.4	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
Tox-ART-HYE1	PF15634.1	gi|557694375|ref|YP_008797429.1|	-	0.0022	17.0	0.1	0.0033	16.4	0.1	1.2	1	0	0	1	1	1	1	HYE1	signature	containing	ADP-ribosyltransferase
ABC_tran	PF00005.22	gi|557694375|ref|YP_008797429.1|	-	0.0068	16.6	0.0	0.013	15.8	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
HAS-barrel	PF09378.5	gi|557694375|ref|YP_008797429.1|	-	0.024	14.5	1.7	0.065	13.1	0.2	2.6	2	1	0	2	2	2	0	HAS	barrel	domain
DUF188	PF02639.9	gi|557694375|ref|YP_008797429.1|	-	0.029	13.8	0.0	0.075	12.4	0.0	1.6	1	0	0	1	1	1	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
NurA	PF09376.5	gi|557694376|ref|YP_008797430.1|	-	1.1e-26	93.8	0.8	1.5e-26	93.3	0.6	1.2	1	0	0	1	1	1	1	NurA	domain
Helicase_C	PF00271.26	gi|557694380|ref|YP_008797434.1|	-	1.7e-20	72.6	0.0	4.7e-20	71.2	0.0	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|557694380|ref|YP_008797434.1|	-	3.2e-19	69.0	0.0	4.7e-18	65.2	0.0	2.5	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|557694380|ref|YP_008797434.1|	-	2.1e-13	50.5	0.0	5e-13	49.2	0.0	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Zot	PF05707.7	gi|557694380|ref|YP_008797434.1|	-	0.024	14.1	0.5	0.44	9.9	0.1	3.2	2	1	1	3	3	3	0	Zonular	occludens	toxin	(Zot)
DUF4404	PF14357.1	gi|557694380|ref|YP_008797434.1|	-	0.12	12.8	1.7	0.39	11.1	1.2	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4404)
Hjc	PF01870.13	gi|557694381|ref|YP_008797435.1|	-	2e-10	40.1	0.1	2.2e-10	39.9	0.1	1.1	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
VRR_NUC	PF08774.6	gi|557694381|ref|YP_008797435.1|	-	2.1e-05	24.4	0.2	2.3e-05	24.3	0.1	1.1	1	0	0	1	1	1	1	VRR-NUC	domain
NERD	PF08378.6	gi|557694381|ref|YP_008797435.1|	-	0.009	16.2	0.0	0.013	15.7	0.0	1.3	1	1	0	1	1	1	1	Nuclease-related	domain
Mrr_cat	PF04471.7	gi|557694381|ref|YP_008797435.1|	-	0.019	14.7	0.2	0.045	13.5	0.1	1.6	1	1	0	1	1	1	0	Restriction	endonuclease
DUF996	PF06195.8	gi|557694383|ref|YP_008797437.1|	-	2e-16	60.2	11.2	2.5e-16	59.9	7.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF996)
DUF2371	PF10177.4	gi|557694383|ref|YP_008797437.1|	-	0.0046	16.8	1.0	0.011	15.6	0.7	1.6	1	0	0	1	1	1	1	Uncharacterised	conserved	protein	(DUF2371)
DUF2964	PF11177.3	gi|557694383|ref|YP_008797437.1|	-	0.0064	16.4	1.9	0.0064	16.4	1.3	3.1	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF2964)
DUF997	PF06196.7	gi|557694383|ref|YP_008797437.1|	-	0.018	14.5	1.0	0.018	14.5	0.7	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF997)
DUF4481	PF14800.1	gi|557694383|ref|YP_008797437.1|	-	0.12	11.2	2.7	0.093	11.6	1.2	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4481)
DUF973	PF06157.6	gi|557694383|ref|YP_008797437.1|	-	0.15	10.9	15.7	1.3	7.9	10.7	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
DUF3816	PF12822.2	gi|557694383|ref|YP_008797437.1|	-	0.93	9.3	16.4	1.3	8.8	11.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3816)
ABC2_membrane_5	PF13346.1	gi|557694383|ref|YP_008797437.1|	-	1	8.6	15.1	4.1	6.6	10.4	1.9	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
MtrF	PF09472.5	gi|557694383|ref|YP_008797437.1|	-	1.6	7.9	7.5	0.84	8.9	1.3	2.5	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
DUF1212	PF06738.7	gi|557694383|ref|YP_008797437.1|	-	3.1	7.2	11.3	14	5.1	7.9	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1212)
7tm_6	PF02949.15	gi|557694383|ref|YP_008797437.1|	-	3.4	6.4	7.4	0.18	10.6	0.5	1.9	1	1	1	2	2	2	0	7tm	Odorant	receptor
TFIIB	PF00382.14	gi|557694384|ref|YP_008797438.1|	-	2.3e-12	46.5	2.4	2.4e-10	40.0	0.0	3.1	2	1	0	2	2	2	1	Transcription	factor	TFIIB	repeat
Cyclin_N	PF00134.18	gi|557694384|ref|YP_008797438.1|	-	0.009	15.5	0.1	0.19	11.2	0.0	2.2	1	1	1	2	2	2	1	Cyclin,	N-terminal	domain
HD_4	PF13328.1	gi|557694384|ref|YP_008797438.1|	-	0.01	15.5	0.9	0.28	10.8	0.1	2.4	1	1	0	2	2	2	0	HD	domain
CH	PF00307.26	gi|557694384|ref|YP_008797438.1|	-	0.11	12.5	0.0	0.21	11.6	0.0	1.6	1	1	0	1	1	1	0	Calponin	homology	(CH)	domain
Rrf2	PF02082.15	gi|557694384|ref|YP_008797438.1|	-	0.16	12.1	0.7	5.1	7.2	0.1	3.0	2	1	1	3	3	3	0	Transcriptional	regulator
Se-cys_synth_N	PF12390.3	gi|557694384|ref|YP_008797438.1|	-	6.4	6.9	7.8	9.8	6.3	0.3	3.2	3	0	0	3	3	3	0	Selenocysteine	synthase	N	terminal
YqhR	PF11085.3	gi|557694385|ref|YP_008797439.1|	-	0.04	13.4	5.0	0.044	13.3	3.5	1.1	1	0	0	1	1	1	0	Conserved	membrane	protein	YqhR
PMP22_Claudin	PF00822.15	gi|557694385|ref|YP_008797439.1|	-	4.7	6.8	7.3	0.64	9.6	1.9	1.8	1	1	1	2	2	2	0	PMP-22/EMP/MP20/Claudin	family
AAA_10	PF12846.2	gi|557694386|ref|YP_008797440.1|	-	1.6e-08	34.3	0.1	0.00032	20.2	0.0	2.2	1	1	0	2	2	2	2	AAA-like	domain
DUF87	PF01935.12	gi|557694386|ref|YP_008797440.1|	-	2e-08	34.3	0.3	3.5e-08	33.5	0.2	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA	PF00004.24	gi|557694386|ref|YP_008797440.1|	-	1.9e-05	24.8	0.0	0.0076	16.4	0.0	2.4	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
FtsK_SpoIIIE	PF01580.13	gi|557694386|ref|YP_008797440.1|	-	2.6e-05	23.8	0.1	0.0083	15.6	0.0	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
AAA_25	PF13481.1	gi|557694386|ref|YP_008797440.1|	-	0.00016	21.1	0.2	0.0062	15.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|557694386|ref|YP_008797440.1|	-	0.00022	19.9	0.0	0.00044	19.0	0.0	1.4	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_22	PF13401.1	gi|557694386|ref|YP_008797440.1|	-	0.0033	17.5	0.1	0.2	11.8	0.0	2.5	1	1	0	1	1	1	1	AAA	domain
DUF2075	PF09848.4	gi|557694386|ref|YP_008797440.1|	-	0.0079	15.2	0.0	0.014	14.3	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.1	gi|557694386|ref|YP_008797440.1|	-	0.0087	15.9	0.0	1.3	8.9	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|557694386|ref|YP_008797440.1|	-	0.013	15.4	0.3	0.037	14.0	0.2	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
T2SE	PF00437.15	gi|557694386|ref|YP_008797440.1|	-	0.04	12.8	0.0	0.068	12.0	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|557694386|ref|YP_008797440.1|	-	0.04	13.6	0.0	0.084	12.6	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
ResIII	PF04851.10	gi|557694386|ref|YP_008797440.1|	-	0.054	13.3	0.1	6.3	6.5	0.0	2.2	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Viral_helicase1	PF01443.13	gi|557694386|ref|YP_008797440.1|	-	0.098	12.1	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_29	PF13555.1	gi|557694386|ref|YP_008797440.1|	-	0.11	12.0	0.5	0.24	10.9	0.3	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|557694386|ref|YP_008797440.1|	-	0.11	12.0	0.3	0.46	10.1	0.2	1.9	2	0	0	2	2	2	0	NACHT	domain
UvrD-helicase	PF00580.16	gi|557694386|ref|YP_008797440.1|	-	0.13	11.5	1.4	0.89	8.7	0.5	2.0	1	1	1	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
ABC_tran	PF00005.22	gi|557694386|ref|YP_008797440.1|	-	0.14	12.4	0.1	0.26	11.5	0.1	1.5	1	1	0	1	1	1	0	ABC	transporter
Pox_A32	PF04665.7	gi|557694386|ref|YP_008797440.1|	-	0.35	10.1	1.0	0.49	9.6	0.1	1.6	2	0	0	2	2	2	0	Poxvirus	A32	protein
NurA	PF09376.5	gi|557694387|ref|YP_008797441.1|	-	4.3e-22	78.7	0.0	7.1e-22	78.0	0.0	1.3	1	0	0	1	1	1	1	NurA	domain
DnaJ	PF00226.26	gi|557694388|ref|YP_008797442.1|	-	5.6e-24	83.6	0.4	8.6e-24	83.0	0.3	1.3	1	0	0	1	1	1	1	DnaJ	domain
DUF1294	PF06961.8	gi|557694388|ref|YP_008797442.1|	-	2.9e-17	62.3	2.3	7.6e-17	61.0	1.6	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1294)
YopD	PF05844.7	gi|557694388|ref|YP_008797442.1|	-	0.11	11.5	0.0	0.19	10.7	0.0	1.3	1	0	0	1	1	1	0	YopD	protein
DUF3353	PF11833.3	gi|557694388|ref|YP_008797442.1|	-	0.15	11.5	3.1	9.2	5.6	1.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3353)
UPF0154	PF03672.8	gi|557694388|ref|YP_008797442.1|	-	0.19	11.3	1.0	6.9	6.3	0.3	2.7	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0154)
YqzM	PF14141.1	gi|557694388|ref|YP_008797442.1|	-	0.26	11.1	2.6	0.69	9.7	1.8	1.7	1	0	0	1	1	1	0	YqzM-like	protein
DUF4325	PF14213.1	gi|557694389|ref|YP_008797443.1|	-	9.3e-09	34.8	0.2	1.5e-08	34.1	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4325)
DUF1840	PF08895.6	gi|557694389|ref|YP_008797443.1|	-	0.047	13.7	0.3	0.26	11.3	0.2	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1840)
STAS_2	PF13466.1	gi|557694389|ref|YP_008797443.1|	-	0.057	13.4	0.0	0.16	12.0	0.0	1.7	1	1	0	1	1	1	0	STAS	domain
RasGEF	PF00617.14	gi|557694389|ref|YP_008797443.1|	-	0.086	12.5	0.1	0.11	12.2	0.1	1.1	1	0	0	1	1	1	0	RasGEF	domain
DUF3496	PF12001.3	gi|557694390|ref|YP_008797444.1|	-	0.077	13.2	0.5	0.095	12.9	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3496)
DUF1627	PF07789.7	gi|557694391|ref|YP_008797445.1|	-	0.08	12.4	0.1	0.11	12.0	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1627)
zf-ribbon_3	PF13248.1	gi|557694392|ref|YP_008797446.1|	-	0.00016	20.7	1.1	0.00033	19.7	0.8	1.5	1	1	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|557694392|ref|YP_008797446.1|	-	0.0006	19.2	1.0	0.0028	17.0	0.7	2.0	1	1	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|557694392|ref|YP_008797446.1|	-	0.0016	18.2	0.1	0.0024	17.6	0.1	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-NADH-PPase	PF09297.6	gi|557694392|ref|YP_008797446.1|	-	0.0019	17.6	1.5	0.0098	15.3	1.1	2.0	1	1	1	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|557694392|ref|YP_008797446.1|	-	0.0038	16.6	0.4	0.017	14.5	0.3	1.9	1	1	1	2	2	2	2	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.7	gi|557694392|ref|YP_008797446.1|	-	0.0099	15.1	1.4	0.019	14.2	0.9	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
PhnA_Zn_Ribbon	PF08274.7	gi|557694392|ref|YP_008797446.1|	-	0.015	15.0	1.0	0.031	14.0	0.7	1.5	1	0	0	1	1	1	0	PhnA	Zinc-Ribbon
Nudix_N_2	PF14803.1	gi|557694392|ref|YP_008797446.1|	-	0.023	14.3	0.9	0.33	10.6	0.0	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
UPF0547	PF10571.4	gi|557694392|ref|YP_008797446.1|	-	0.036	13.7	2.5	0.072	12.7	1.8	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Prok-RING_1	PF14446.1	gi|557694392|ref|YP_008797446.1|	-	0.05	13.3	0.3	0.088	12.5	0.2	1.4	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
IBR	PF01485.16	gi|557694392|ref|YP_008797446.1|	-	0.056	13.3	0.2	0.096	12.5	0.1	1.4	1	0	0	1	1	1	0	IBR	domain
DNA_ligase_ZBD	PF03119.11	gi|557694392|ref|YP_008797446.1|	-	0.29	10.8	3.1	0.27	10.9	1.1	1.7	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
UBA	PF00627.26	gi|557694393|ref|YP_008797447.1|	-	0.033	14.0	0.1	1.1	9.1	0.0	2.6	3	0	0	3	3	3	0	UBA/TS-N	domain
PepSY_2	PF13670.1	gi|557694393|ref|YP_008797447.1|	-	0.073	12.9	0.0	7.7	6.4	0.1	2.1	1	1	1	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
Abhydrolase_6	PF12697.2	gi|557694394|ref|YP_008797448.1|	-	5e-19	69.0	1.4	5.9e-19	68.8	1.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|557694394|ref|YP_008797448.1|	-	1.8e-05	24.5	0.0	2.9e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|557694394|ref|YP_008797448.1|	-	0.015	14.8	0.0	0.027	14.0	0.0	1.4	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
NAD_binding_10	PF13460.1	gi|557694394|ref|YP_008797448.1|	-	0.1	12.6	0.1	0.19	11.7	0.1	1.5	1	1	0	1	1	1	0	NADH(P)-binding
FadA	PF09403.5	gi|557694395|ref|YP_008797449.1|	-	0.081	12.9	0.4	0.091	12.7	0.2	1.2	1	0	0	1	1	1	0	Adhesion	protein	FadA
RHH_1	PF01402.16	gi|557694395|ref|YP_008797449.1|	-	0.65	9.9	5.3	1.6	8.7	0.3	3.2	2	2	1	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
PIN	PF01850.16	gi|557694396|ref|YP_008797450.1|	-	3.7e-11	43.4	0.7	4.5e-11	43.1	0.5	1.0	1	0	0	1	1	1	1	PIN	domain
PIN_2	PF10130.4	gi|557694396|ref|YP_008797450.1|	-	0.014	15.3	0.1	0.019	15.0	0.0	1.2	1	0	0	1	1	1	0	PIN	domain
Meth_synt_2	PF01717.13	gi|557694397|ref|YP_008797451.1|	-	7.2e-13	48.2	0.0	7.5e-13	48.1	0.0	1.1	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|557694397|ref|YP_008797451.1|	-	0.0037	16.5	0.0	0.0053	16.0	0.0	1.2	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
OsmC	PF02566.14	gi|557694398|ref|YP_008797452.1|	-	0.0007	19.7	0.0	0.00072	19.7	0.0	1.1	1	0	0	1	1	1	1	OsmC-like	protein
HEPN	PF05168.9	gi|557694399|ref|YP_008797453.1|	-	1.2e-31	109.0	0.1	1.4e-31	108.8	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
PaREP1	PF05942.6	gi|557694399|ref|YP_008797453.1|	-	0.052	13.4	0.2	0.072	12.9	0.1	1.5	1	1	0	1	1	1	0	Archaeal	PaREP1/PaREP8	family
NTP_transf_2	PF01909.18	gi|557694400|ref|YP_008797454.1|	-	1.5e-10	41.2	0.2	1.9e-10	40.9	0.1	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF1884	PF08967.5	gi|557694400|ref|YP_008797454.1|	-	0.0017	18.3	0.1	0.27	11.3	0.0	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1884)
HTH_24	PF13412.1	gi|557694400|ref|YP_008797454.1|	-	0.036	13.4	0.1	2.8	7.3	0.0	2.4	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DUF4269	PF14091.1	gi|557694400|ref|YP_008797454.1|	-	0.11	12.4	0.0	0.15	12.0	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4269)
DUF294	PF03445.8	gi|557694400|ref|YP_008797454.1|	-	0.13	11.8	0.0	0.17	11.5	0.0	1.2	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
Dala_Dala_lig_C	PF07478.8	gi|557694401|ref|YP_008797455.1|	-	3.2e-25	88.7	0.0	4.8e-25	88.1	0.0	1.3	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
Methyltransf_18	PF12847.2	gi|557694401|ref|YP_008797455.1|	-	3.2e-20	72.7	0.0	1.1e-19	71.0	0.0	1.9	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|557694401|ref|YP_008797455.1|	-	6.4e-20	71.4	0.0	1.2e-19	70.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|557694401|ref|YP_008797455.1|	-	7.5e-20	71.1	0.0	3.5e-19	69.0	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|557694401|ref|YP_008797455.1|	-	3.2e-19	69.0	0.0	6.9e-19	67.9	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|557694401|ref|YP_008797455.1|	-	2.3e-14	53.0	0.0	4.8e-14	52.0	0.0	1.4	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
ATP-grasp_4	PF13535.1	gi|557694401|ref|YP_008797455.1|	-	1.6e-13	50.8	0.0	6e-13	48.9	0.0	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
Methyltransf_23	PF13489.1	gi|557694401|ref|YP_008797455.1|	-	8.1e-11	41.9	0.0	2.6e-10	40.2	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|557694401|ref|YP_008797455.1|	-	1.5e-10	41.1	0.0	3.6e-10	39.9	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|557694401|ref|YP_008797455.1|	-	1.4e-09	38.2	0.0	3.6e-09	36.9	0.0	1.7	2	0	0	2	2	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|557694401|ref|YP_008797455.1|	-	2.5e-08	33.4	0.0	4.2e-08	32.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
ATP-grasp_3	PF02655.9	gi|557694401|ref|YP_008797455.1|	-	1.7e-06	28.0	0.0	4.3e-06	26.6	0.0	1.7	1	1	0	1	1	1	1	ATP-grasp	domain
TehB	PF03848.9	gi|557694401|ref|YP_008797455.1|	-	2.3e-06	26.9	0.0	3.9e-06	26.1	0.0	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
ATPgrasp_Ter	PF15632.1	gi|557694401|ref|YP_008797455.1|	-	3.7e-05	22.6	0.0	0.16	10.7	0.0	2.8	3	1	0	3	3	3	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
UPF0020	PF01170.13	gi|557694401|ref|YP_008797455.1|	-	0.00012	21.7	0.0	0.00025	20.6	0.0	1.5	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_9	PF08003.6	gi|557694401|ref|YP_008797455.1|	-	0.00054	18.7	0.0	0.00087	18.0	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
RrnaAD	PF00398.15	gi|557694401|ref|YP_008797455.1|	-	0.00087	18.3	0.0	0.0014	17.6	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
CMAS	PF02353.15	gi|557694401|ref|YP_008797455.1|	-	0.0017	17.5	0.0	0.0026	16.8	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Cons_hypoth95	PF03602.10	gi|557694401|ref|YP_008797455.1|	-	0.0062	15.9	0.1	0.015	14.7	0.0	1.6	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
PCMT	PF01135.14	gi|557694401|ref|YP_008797455.1|	-	0.011	15.3	0.0	0.019	14.5	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_15	PF09445.5	gi|557694401|ref|YP_008797455.1|	-	0.014	14.9	0.0	0.024	14.1	0.0	1.3	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_4	PF02390.12	gi|557694401|ref|YP_008797455.1|	-	0.034	13.1	0.0	0.063	12.3	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
RimK	PF08443.6	gi|557694401|ref|YP_008797455.1|	-	0.035	13.5	0.0	0.088	12.2	0.0	1.7	2	0	0	2	2	2	0	RimK-like	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|557694401|ref|YP_008797455.1|	-	0.055	12.7	0.0	0.11	11.7	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
tRNA_U5-meth_tr	PF05958.6	gi|557694401|ref|YP_008797455.1|	-	0.079	11.6	0.0	0.13	10.9	0.0	1.2	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_29	PF03141.11	gi|557694401|ref|YP_008797455.1|	-	0.082	11.2	0.0	0.12	10.6	0.0	1.1	1	0	0	1	1	1	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
GARS_A	PF01071.14	gi|557694401|ref|YP_008797455.1|	-	0.089	12.3	0.0	0.2	11.2	0.0	1.5	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
PrmA	PF06325.8	gi|557694401|ref|YP_008797455.1|	-	0.14	11.2	0.0	0.24	10.4	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
GHMP_kinases_C	PF08544.8	gi|557694401|ref|YP_008797455.1|	-	0.16	12.1	0.0	0.43	10.8	0.0	1.7	1	0	0	1	1	1	0	GHMP	kinases	C	terminal
NTP_transf_2	PF01909.18	gi|557694402|ref|YP_008797456.1|	-	4.9e-12	46.0	0.1	6.9e-12	45.5	0.1	1.3	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|557694402|ref|YP_008797456.1|	-	0.034	14.1	0.0	0.041	13.9	0.0	1.2	1	0	0	1	1	1	0	DNA	polymerase	beta	palm
HEPN	PF05168.9	gi|557694403|ref|YP_008797457.1|	-	6.7e-23	80.8	0.0	8.5e-23	80.4	0.0	1.1	1	0	0	1	1	1	1	HEPN	domain
ATP_bind_4	PF01902.12	gi|557694404|ref|YP_008797458.1|	-	3.2e-38	131.3	0.0	3.8e-38	131.0	0.0	1.0	1	0	0	1	1	1	1	ATP-binding	region
Nitrate_red_del	PF02613.10	gi|557694405|ref|YP_008797459.1|	-	4.7e-14	52.3	0.2	6.4e-14	51.9	0.1	1.3	1	1	0	1	1	1	1	Nitrate	reductase	delta	subunit
EB_dh	PF09459.5	gi|557694406|ref|YP_008797460.1|	-	2.4e-22	79.6	0.1	5.7e-22	78.4	0.0	1.6	1	1	0	1	1	1	1	Ethylbenzene	dehydrogenase
Fer4_11	PF13247.1	gi|557694407|ref|YP_008797461.1|	-	2.5e-31	107.5	6.4	2.5e-31	107.5	4.4	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|557694407|ref|YP_008797461.1|	-	8.4e-09	35.1	16.2	6.1e-05	22.7	2.6	3.3	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|557694407|ref|YP_008797461.1|	-	2e-06	28.0	18.3	0.00074	19.8	3.6	3.3	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|557694407|ref|YP_008797461.1|	-	0.00025	20.7	3.8	0.00025	20.7	2.7	4.6	4	1	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|557694407|ref|YP_008797461.1|	-	0.00078	19.6	20.6	0.032	14.5	0.2	3.8	2	1	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|557694407|ref|YP_008797461.1|	-	0.0015	18.3	0.8	0.0015	18.3	0.5	3.3	2	1	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|557694407|ref|YP_008797461.1|	-	0.0046	16.5	2.5	0.0046	16.5	1.7	4.3	4	0	0	4	4	4	1	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|557694407|ref|YP_008797461.1|	-	0.035	13.9	3.5	0.035	13.9	2.4	4.8	4	1	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|557694407|ref|YP_008797461.1|	-	0.038	14.0	0.1	0.038	14.0	0.0	3.1	3	2	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|557694407|ref|YP_008797461.1|	-	0.11	12.8	0.6	0.11	12.8	0.4	3.0	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|557694407|ref|YP_008797461.1|	-	0.16	12.3	0.2	0.16	12.3	0.1	3.6	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|557694407|ref|YP_008797461.1|	-	0.28	11.7	15.4	0.25	11.9	0.8	3.1	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Molybdopterin	PF00384.17	gi|557694408|ref|YP_008797462.1|	-	8e-17	61.0	0.0	1.2e-16	60.4	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|557694408|ref|YP_008797462.1|	-	0.00024	20.8	0.1	0.031	14.0	0.0	2.7	3	0	0	3	3	3	2	Molydopterin	dinucleotide	binding	domain
Molybdopterin	PF00384.17	gi|557694409|ref|YP_008797463.1|	-	1.1e-21	77.1	0.0	1.1e-18	67.1	0.0	2.1	2	0	0	2	2	2	2	Molybdopterin	oxidoreductase
HTH_10	PF04967.7	gi|557694410|ref|YP_008797464.1|	-	4.6e-18	64.5	0.1	7.2e-18	63.9	0.1	1.3	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_24	PF13412.1	gi|557694410|ref|YP_008797464.1|	-	0.053	12.9	0.0	0.21	10.9	0.0	2.0	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_AraC	PF00165.18	gi|557694410|ref|YP_008797464.1|	-	0.07	12.9	0.0	0.15	11.9	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
HTH_DeoR	PF08220.7	gi|557694410|ref|YP_008797464.1|	-	0.11	12.0	0.0	0.26	10.8	0.0	1.7	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
Pyr_redox_2	PF07992.9	gi|557694411|ref|YP_008797465.1|	-	3e-41	141.5	0.3	1.1e-39	136.3	0.2	3.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|557694411|ref|YP_008797465.1|	-	2e-20	72.8	0.0	4.5e-20	71.7	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|557694411|ref|YP_008797465.1|	-	1.3e-16	60.7	3.1	6.3e-15	55.3	0.2	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|557694411|ref|YP_008797465.1|	-	1.5e-10	41.5	0.0	8.4e-06	25.9	0.0	2.4	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|557694411|ref|YP_008797465.1|	-	2.5e-08	33.2	0.6	2.3e-06	26.7	0.0	3.4	2	1	2	4	4	4	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|557694411|ref|YP_008797465.1|	-	0.00031	19.3	4.0	0.14	10.5	0.0	2.9	3	1	1	4	4	4	2	HI0933-like	protein
NAD_binding_9	PF13454.1	gi|557694411|ref|YP_008797465.1|	-	0.00039	20.2	0.2	0.21	11.3	0.0	2.9	3	0	0	3	3	3	1	FAD-NAD(P)-binding
NAD_binding_8	PF13450.1	gi|557694411|ref|YP_008797465.1|	-	0.0031	17.4	0.2	4	7.5	0.1	2.7	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.2	gi|557694411|ref|YP_008797465.1|	-	0.0048	16.0	0.1	0.3	10.1	0.0	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.13	gi|557694411|ref|YP_008797465.1|	-	0.025	14.2	0.1	0.063	12.9	0.1	1.7	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Trp_halogenase	PF04820.9	gi|557694411|ref|YP_008797465.1|	-	0.049	12.2	0.4	0.081	11.5	0.2	1.3	1	0	0	1	1	1	0	Tryptophan	halogenase
FAD_binding_2	PF00890.19	gi|557694411|ref|YP_008797465.1|	-	0.069	11.9	7.9	0.11	11.2	0.8	3.6	3	1	1	5	5	5	0	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|557694411|ref|YP_008797465.1|	-	0.11	12.7	0.0	14	6.0	0.0	2.4	2	0	0	2	2	2	0	Putative	NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|557694411|ref|YP_008797465.1|	-	0.12	11.2	4.2	1.5	7.6	0.2	2.9	2	1	1	3	3	3	0	Lycopene	cyclase	protein
DAO	PF01266.19	gi|557694411|ref|YP_008797465.1|	-	0.18	10.6	7.4	1.7	7.4	0.3	2.9	3	1	0	3	3	3	0	FAD	dependent	oxidoreductase
HxlR	PF01638.12	gi|557694412|ref|YP_008797466.1|	-	1e-22	79.5	0.2	1.6e-22	78.8	0.1	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_9	PF08221.6	gi|557694412|ref|YP_008797466.1|	-	0.0054	16.5	0.0	0.019	14.8	0.0	1.8	3	0	0	3	3	3	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
PadR	PF03551.9	gi|557694412|ref|YP_008797466.1|	-	0.0081	15.9	0.0	0.012	15.3	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
RepL	PF05732.6	gi|557694412|ref|YP_008797466.1|	-	0.028	13.6	0.0	0.035	13.3	0.0	1.2	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
MarR	PF01047.17	gi|557694412|ref|YP_008797466.1|	-	0.058	13.1	0.0	0.091	12.4	0.0	1.3	1	0	0	1	1	1	0	MarR	family
B-block_TFIIIC	PF04182.7	gi|557694412|ref|YP_008797466.1|	-	0.078	12.8	0.0	0.095	12.5	0.0	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
NurA	PF09376.5	gi|557694413|ref|YP_008797467.1|	-	2.9e-16	59.7	0.1	4.5e-16	59.0	0.1	1.3	1	0	0	1	1	1	1	NurA	domain
DUF4322	PF14210.1	gi|557694413|ref|YP_008797467.1|	-	0.34	10.4	1.3	1.2	8.6	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4322)
DUF87	PF01935.12	gi|557694414|ref|YP_008797468.1|	-	1.4e-38	133.0	0.0	2.3e-38	132.3	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|557694414|ref|YP_008797468.1|	-	4.3e-29	101.9	0.1	8e-29	101.0	0.1	1.4	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|557694414|ref|YP_008797468.1|	-	8.1e-06	25.4	0.2	0.00018	21.0	0.1	2.6	1	1	0	1	1	1	1	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|557694414|ref|YP_008797468.1|	-	2e-05	23.4	0.0	0.0023	16.6	0.0	2.3	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Zot	PF05707.7	gi|557694414|ref|YP_008797468.1|	-	4.1e-05	23.1	0.0	0.00046	19.6	0.0	2.2	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
DUF853	PF05872.7	gi|557694414|ref|YP_008797468.1|	-	0.00033	19.1	0.1	0.074	11.3	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
T4SS-DNA_transf	PF02534.9	gi|557694414|ref|YP_008797468.1|	-	0.0019	16.8	0.0	0.0026	16.4	0.0	1.2	1	0	0	1	1	1	1	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA_22	PF13401.1	gi|557694414|ref|YP_008797468.1|	-	0.0026	17.9	0.0	0.25	11.4	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
TAF8_C	PF10406.4	gi|557694414|ref|YP_008797468.1|	-	0.017	15.1	0.0	0.05	13.6	0.0	1.8	1	0	0	1	1	1	0	Transcription	factor	TFIID	complex	subunit	8	C-term
AAA_16	PF13191.1	gi|557694414|ref|YP_008797468.1|	-	0.027	14.4	0.1	0.058	13.3	0.0	1.7	1	0	0	1	1	1	0	AAA	ATPase	domain
Helicase_RecD	PF05127.9	gi|557694414|ref|YP_008797468.1|	-	0.09	12.4	0.0	0.18	11.4	0.0	1.6	1	0	0	1	1	1	0	Helicase
ResIII	PF04851.10	gi|557694414|ref|YP_008797468.1|	-	0.12	12.2	0.0	0.5	10.1	0.0	1.9	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|557694414|ref|YP_008797468.1|	-	0.12	11.8	0.0	8.9	5.7	0.0	2.4	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
Metallophos_2	PF12850.2	gi|557694415|ref|YP_008797469.1|	-	1e-13	51.4	0.1	1.8e-13	50.5	0.1	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|557694415|ref|YP_008797469.1|	-	5.3e-11	42.3	0.4	4.9e-10	39.1	0.3	2.1	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.1	gi|557694415|ref|YP_008797469.1|	-	5.9e-05	22.3	0.3	0.75	8.8	0.0	3.7	3	1	0	3	3	3	2	Metallophosphoesterase,	calcineurin	superfamily
Homeobox	PF00046.24	gi|557694415|ref|YP_008797469.1|	-	0.0074	15.8	0.6	0.08	12.5	0.3	2.4	2	0	0	2	2	2	1	Homeobox	domain
DUF4088	PF13317.1	gi|557694415|ref|YP_008797469.1|	-	0.016	14.5	0.0	0.036	13.3	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4088)
HAD	PF12710.2	gi|557694415|ref|YP_008797469.1|	-	0.082	13.0	0.0	0.15	12.2	0.0	1.9	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
AAA_23	PF13476.1	gi|557694416|ref|YP_008797470.1|	-	6e-16	59.3	54.0	9.4e-16	58.7	23.1	4.3	2	2	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|557694416|ref|YP_008797470.1|	-	7.6e-13	48.1	0.0	4e-12	45.8	0.0	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|557694416|ref|YP_008797470.1|	-	8.2e-07	28.4	0.0	1.7e-06	27.4	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.1	gi|557694416|ref|YP_008797470.1|	-	9.2e-06	25.4	0.0	3.3e-05	23.7	0.0	1.9	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|557694416|ref|YP_008797470.1|	-	0.00098	18.2	11.7	0.00098	18.2	8.1	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
IncA	PF04156.9	gi|557694416|ref|YP_008797470.1|	-	0.0024	17.5	20.8	0.0024	17.5	14.5	4.8	2	2	2	4	4	2	2	IncA	protein
WEMBL	PF05701.6	gi|557694416|ref|YP_008797470.1|	-	0.0026	16.3	15.2	0.0026	16.3	10.5	3.0	2	2	0	2	2	1	1	Weak	chloroplast	movement	under	blue	light
DUF1290	PF06947.7	gi|557694416|ref|YP_008797470.1|	-	0.013	15.3	2.2	0.042	13.7	1.5	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1290)
CENP-F_leu_zip	PF10473.4	gi|557694416|ref|YP_008797470.1|	-	0.014	15.2	2.5	0.014	15.2	1.8	5.5	4	2	1	5	5	5	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Peptidase_S46	PF10459.4	gi|557694416|ref|YP_008797470.1|	-	1.1	7.5	23.1	0.28	9.5	8.5	2.7	2	1	0	2	2	2	0	Peptidase	S46
FlaC_arch	PF05377.6	gi|557694416|ref|YP_008797470.1|	-	3.4	7.6	26.4	4.6	7.2	0.6	7.6	6	2	2	8	8	8	0	Flagella	accessory	protein	C	(FlaC)
T2SG	PF08334.6	gi|557694416|ref|YP_008797470.1|	-	5.2	6.8	6.4	2.8	7.7	0.1	3.5	4	0	0	4	4	4	0	Type	II	secretion	system	(T2SS),	protein	G
Peptidase_C65	PF10275.4	gi|557694416|ref|YP_008797470.1|	-	9.7	5.4	16.3	0.25	10.6	2.8	3.5	2	2	3	5	5	5	0	Peptidase	C65	Otubain
HD	PF01966.17	gi|557694417|ref|YP_008797471.1|	-	2e-06	27.8	2.0	2.8e-06	27.3	1.4	1.5	1	1	0	1	1	1	1	HD	domain
Helicase_C	PF00271.26	gi|557694418|ref|YP_008797472.1|	-	9.8e-11	41.3	0.0	2.2e-10	40.2	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|557694418|ref|YP_008797472.1|	-	2.9e-07	30.1	0.2	0.0002	20.9	0.0	3.6	3	1	0	3	3	3	1	DEAD/DEAH	box	helicase
Mpp10	PF04006.7	gi|557694418|ref|YP_008797472.1|	-	0.041	12.2	0.1	0.062	11.6	0.1	1.1	1	0	0	1	1	1	0	Mpp10	protein
Sulfotransfer_1	PF00685.22	gi|557694420|ref|YP_008797474.1|	-	0.048	12.9	0.0	0.05	12.8	0.0	1.1	1	0	0	1	1	1	0	Sulfotransferase	domain
Cas_Cas5d	PF09704.5	gi|557694421|ref|YP_008797475.1|	-	1.8e-06	27.7	0.0	2.7e-06	27.1	0.0	1.3	1	1	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas5)
DUF3764	PF12594.3	gi|557694421|ref|YP_008797475.1|	-	0.0006	19.5	0.2	0.0047	16.6	0.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3764)
DevR	PF01905.11	gi|557694422|ref|YP_008797476.1|	-	3.5e-66	222.8	0.0	5.1e-66	222.2	0.0	1.2	1	0	0	1	1	1	1	CRISPR-associated	negative	auto-regulator	DevR/Csa2
Cas_Csa5	PF09702.5	gi|557694423|ref|YP_008797477.1|	-	5.5e-10	39.2	1.1	7.9e-05	22.6	0.1	2.2	1	1	1	2	2	2	2	CRISPR-associated	protein	(Cas_Csa5)
L-fibroin	PF05849.6	gi|557694423|ref|YP_008797477.1|	-	0.0052	16.1	0.2	0.0064	15.8	0.1	1.1	1	0	0	1	1	1	1	Fibroin	light	chain	(L-fibroin)
Herpes_UL36	PF03586.8	gi|557694423|ref|YP_008797477.1|	-	0.053	12.6	2.0	0.48	9.4	0.3	2.0	1	1	1	2	2	2	0	Herpesvirus	UL36	tegument	protein
DUF3401	PF11881.3	gi|557694423|ref|YP_008797477.1|	-	0.13	11.6	0.1	0.15	11.3	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3401)
HTH_20	PF12840.2	gi|557694424|ref|YP_008797478.1|	-	0.0011	18.7	0.1	0.002	17.8	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|557694424|ref|YP_008797478.1|	-	0.0031	17.0	0.2	0.0082	15.7	0.1	1.8	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF1887	PF09002.6	gi|557694424|ref|YP_008797478.1|	-	0.0078	14.6	0.0	0.01	14.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1887)
Cas_NE0113	PF09623.5	gi|557694424|ref|YP_008797478.1|	-	0.032	13.6	0.0	0.042	13.3	0.0	1.2	1	0	0	1	1	1	0	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_APE2256	PF09651.5	gi|557694424|ref|YP_008797478.1|	-	0.045	13.4	0.1	0.083	12.6	0.1	1.6	1	1	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
HTH_24	PF13412.1	gi|557694424|ref|YP_008797478.1|	-	0.053	12.9	0.1	0.15	11.4	0.0	1.8	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|557694424|ref|YP_008797478.1|	-	0.069	13.4	0.2	0.2	11.9	0.1	1.9	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|557694424|ref|YP_008797478.1|	-	0.36	10.5	2.1	0.57	9.9	0.1	2.3	3	0	0	3	3	3	0	Sugar-specific	transcriptional	regulator	TrmB
DUF2276	PF10040.4	gi|557694425|ref|YP_008797479.1|	-	1.4e-16	60.7	0.5	5.1e-16	58.9	0.3	1.9	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2276)
Uroplakin_II	PF07353.7	gi|557694425|ref|YP_008797479.1|	-	0.14	11.4	0.0	0.24	10.7	0.0	1.2	1	0	0	1	1	1	0	Uroplakin	II
Cas_Cas1	PF01867.11	gi|557694426|ref|YP_008797480.1|	-	9.6e-59	198.7	0.0	1.2e-58	198.4	0.0	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
CRISPR_Cas2	PF09827.4	gi|557694427|ref|YP_008797481.1|	-	1.2e-14	54.1	0.0	1.3e-14	54.0	0.0	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas4	PF01930.12	gi|557694428|ref|YP_008797482.1|	-	2.7e-16	59.9	0.0	3.4e-16	59.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|557694428|ref|YP_008797482.1|	-	3e-10	39.9	0.0	3.5e-10	39.7	0.0	1.1	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
RAMPs	PF03787.10	gi|557694429|ref|YP_008797483.1|	-	5.9e-12	45.8	0.0	1.2e-11	44.9	0.0	1.5	1	1	0	1	1	1	1	RAMP	superfamily
MaoC_dehydratas	PF01575.14	gi|557694429|ref|YP_008797483.1|	-	0.12	11.7	0.0	0.23	10.8	0.0	1.4	1	0	0	1	1	1	0	MaoC	like	domain
RAMPs	PF03787.10	gi|557694430|ref|YP_008797484.1|	-	0.00024	21.0	0.0	0.0032	17.3	0.0	2.1	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|557694431|ref|YP_008797485.1|	-	1.5e-08	34.7	0.0	2.2e-08	34.2	0.0	1.4	1	1	0	1	1	1	1	RAMP	superfamily
HD	PF01966.17	gi|557694432|ref|YP_008797486.1|	-	3.3e-09	36.7	0.3	7.1e-09	35.7	0.2	1.5	1	0	0	1	1	1	1	HD	domain
DUF3692	PF12469.3	gi|557694432|ref|YP_008797486.1|	-	0.00042	20.5	2.0	0.00087	19.5	0.0	2.7	3	0	0	3	3	3	1	CRISPR-associated	protein
RAMPs	PF03787.10	gi|557694433|ref|YP_008797487.1|	-	1.9e-08	34.4	0.0	3.2e-08	33.6	0.0	1.5	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|557694434|ref|YP_008797488.1|	-	1.8e-24	86.8	0.0	3.2e-24	85.9	0.0	1.3	1	0	0	1	1	1	1	RAMP	superfamily
Cas_Cmr3	PF09700.5	gi|557694434|ref|YP_008797488.1|	-	0.0074	15.7	0.0	0.0098	15.3	0.0	1.2	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cmr3)
RAMPs	PF03787.10	gi|557694435|ref|YP_008797489.1|	-	1.7e-23	83.6	0.0	3.2e-23	82.7	0.0	1.5	1	1	0	1	1	1	1	RAMP	superfamily
Cas_DxTHG	PF09455.5	gi|557694437|ref|YP_008797491.1|	-	9.2e-14	51.3	0.0	1.9e-13	50.3	0.0	1.5	2	0	0	2	2	2	1	CRISPR-associated	(Cas)	DxTHG	family
Sua5_yciO_yrdC	PF01300.13	gi|557694438|ref|YP_008797492.1|	-	0.00091	18.5	0.0	0.0011	18.2	0.0	1.1	1	0	0	1	1	1	1	Telomere	recombination
TMP-TENI	PF02581.12	gi|557694439|ref|YP_008797493.1|	-	1.2e-46	158.0	0.1	1.4e-46	157.8	0.0	1.0	1	0	0	1	1	1	1	Thiamine	monophosphate	synthase/TENI
His_biosynth	PF00977.16	gi|557694439|ref|YP_008797493.1|	-	0.00087	18.6	0.1	0.0011	18.2	0.1	1.3	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NanE	PF04131.9	gi|557694439|ref|YP_008797493.1|	-	0.00094	18.1	0.1	0.0018	17.2	0.0	1.5	1	1	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
NMO	PF03060.10	gi|557694439|ref|YP_008797493.1|	-	0.0021	17.2	0.8	0.0034	16.5	0.3	1.4	1	1	0	1	1	1	1	Nitronate	monooxygenase
DUF561	PF04481.7	gi|557694439|ref|YP_008797493.1|	-	0.0035	16.3	0.1	0.0092	14.9	0.1	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF561)
ThiG	PF05690.9	gi|557694439|ref|YP_008797493.1|	-	0.011	14.8	0.4	0.019	14.0	0.3	1.4	1	0	0	1	1	1	0	Thiazole	biosynthesis	protein	ThiG
DHO_dh	PF01180.16	gi|557694439|ref|YP_008797493.1|	-	0.016	14.1	0.1	0.022	13.7	0.1	1.3	1	0	0	1	1	1	0	Dihydroorotate	dehydrogenase
FMN_dh	PF01070.13	gi|557694439|ref|YP_008797493.1|	-	0.032	13.0	1.2	0.065	12.0	0.8	1.5	1	1	0	1	1	1	0	FMN-dependent	dehydrogenase
Dus	PF01207.12	gi|557694439|ref|YP_008797493.1|	-	0.034	12.9	0.1	0.084	11.6	0.0	1.6	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
QRPTase_C	PF01729.14	gi|557694439|ref|YP_008797493.1|	-	0.095	12.2	0.0	0.14	11.7	0.0	1.2	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
ThiG	PF05690.9	gi|557694440|ref|YP_008797494.1|	-	6e-101	336.6	0.6	6.7e-101	336.5	0.4	1.0	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
His_biosynth	PF00977.16	gi|557694440|ref|YP_008797494.1|	-	0.00078	18.7	0.1	0.0014	17.9	0.1	1.3	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.13	gi|557694440|ref|YP_008797494.1|	-	0.0016	17.3	0.6	0.0027	16.5	0.4	1.3	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
DUF561	PF04481.7	gi|557694440|ref|YP_008797494.1|	-	0.012	14.5	0.5	0.022	13.7	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
Dus	PF01207.12	gi|557694440|ref|YP_008797494.1|	-	0.025	13.4	0.5	0.058	12.2	0.4	1.6	1	0	0	1	1	1	0	Dihydrouridine	synthase	(Dus)
IMPDH	PF00478.20	gi|557694440|ref|YP_008797494.1|	-	0.029	13.2	1.2	0.043	12.7	0.8	1.2	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
Hydrolase_like	PF13242.1	gi|557694440|ref|YP_008797494.1|	-	0.043	13.5	0.1	0.11	12.1	0.1	1.7	1	0	0	1	1	1	0	HAD-hyrolase-like
NanE	PF04131.9	gi|557694440|ref|YP_008797494.1|	-	0.081	11.8	1.1	1.1	8.1	0.2	2.1	1	1	1	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
ThiS	PF02597.15	gi|557694441|ref|YP_008797495.1|	-	4.9e-14	52.5	0.3	5.8e-14	52.2	0.2	1.1	1	0	0	1	1	1	1	ThiS	family
Lambda_tail_I	PF06805.7	gi|557694441|ref|YP_008797495.1|	-	1.4e-09	37.6	1.1	1.6e-09	37.4	0.8	1.0	1	0	0	1	1	1	1	Bacteriophage	lambda	tail	assembly	protein	I
DUF2635	PF10948.3	gi|557694441|ref|YP_008797495.1|	-	0.0032	16.7	0.1	0.0051	16.0	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2635)
GTP_EFTU_D4	PF14578.1	gi|557694441|ref|YP_008797495.1|	-	0.012	15.2	1.1	0.12	12.0	0.7	1.9	1	1	0	1	1	1	0	Elongation	factor	Tu	domain	4
TGS	PF02824.16	gi|557694441|ref|YP_008797495.1|	-	0.038	13.8	0.2	0.068	13.0	0.1	1.6	1	1	0	1	1	1	0	TGS	domain
Thioredoxin_5	PF13743.1	gi|557694442|ref|YP_008797496.1|	-	7.9e-33	113.4	0.0	1.2e-32	112.9	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
DSBA	PF01323.15	gi|557694442|ref|YP_008797496.1|	-	2.7e-15	56.4	0.7	3e-14	53.0	0.1	2.5	2	1	0	2	2	2	1	DSBA-like	thioredoxin	domain
Thioredoxin_4	PF13462.1	gi|557694442|ref|YP_008797496.1|	-	7e-06	26.1	0.0	0.0014	18.6	0.0	2.3	1	1	0	1	1	1	1	Thioredoxin
TrmB	PF01978.14	gi|557694442|ref|YP_008797496.1|	-	0.0023	17.5	0.0	0.0061	16.2	0.0	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Penicillinase_R	PF03965.11	gi|557694442|ref|YP_008797496.1|	-	0.0089	16.1	0.1	0.022	14.8	0.0	1.6	1	0	0	1	1	1	1	Penicillinase	repressor
Thioredoxin	PF00085.15	gi|557694442|ref|YP_008797496.1|	-	0.022	14.4	0.0	1.4	8.6	0.1	2.4	2	0	0	2	2	2	0	Thioredoxin
ANT	PF03374.9	gi|557694442|ref|YP_008797496.1|	-	0.048	13.6	0.0	0.11	12.5	0.0	1.6	1	0	0	1	1	1	0	Phage	antirepressor	protein	KilAC	domain
Thioredoxin_2	PF13098.1	gi|557694442|ref|YP_008797496.1|	-	0.13	12.4	0.1	2	8.6	0.1	2.3	1	1	0	1	1	1	0	Thioredoxin-like	domain
DSBA	PF01323.15	gi|557694443|ref|YP_008797497.1|	-	9.9e-22	77.4	0.4	3.2e-21	75.7	0.3	1.7	1	1	0	1	1	1	1	DSBA-like	thioredoxin	domain
Thioredoxin_5	PF13743.1	gi|557694443|ref|YP_008797497.1|	-	4.3e-17	62.2	0.0	2e-16	60.0	0.0	1.8	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_4	PF13462.1	gi|557694443|ref|YP_008797497.1|	-	1e-07	32.1	0.1	2.5e-05	24.3	0.0	2.2	1	1	0	2	2	2	2	Thioredoxin
Thioredoxin_3	PF13192.1	gi|557694443|ref|YP_008797497.1|	-	0.00062	19.5	0.1	0.0016	18.1	0.0	1.8	2	0	0	2	2	2	1	Thioredoxin	domain
DUF1525	PF07511.6	gi|557694443|ref|YP_008797497.1|	-	0.024	14.6	0.1	0.044	13.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1525)
HypA	PF01155.14	gi|557694445|ref|YP_008797499.1|	-	9.5e-19	67.1	0.2	1.1e-18	66.9	0.2	1.0	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
TF_Zn_Ribbon	PF08271.7	gi|557694445|ref|YP_008797499.1|	-	0.00075	18.7	1.2	0.041	13.1	0.2	2.3	2	0	0	2	2	2	1	TFIIB	zinc-binding
Lar_restr_allev	PF14354.1	gi|557694445|ref|YP_008797499.1|	-	0.00086	19.5	0.0	1.5	9.2	0.0	2.3	2	0	0	2	2	2	2	Restriction	alleviation	protein	Lar
Herpes_UL49_1	PF03117.9	gi|557694445|ref|YP_008797499.1|	-	0.1	11.6	0.2	0.65	9.0	0.1	2.0	1	1	0	1	1	1	0	UL49	family
Nudix_N_2	PF14803.1	gi|557694445|ref|YP_008797499.1|	-	0.11	12.2	2.2	0.31	10.7	0.1	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
zf-CCHC_4	PF14392.1	gi|557694445|ref|YP_008797499.1|	-	0.19	11.4	1.6	0.68	9.6	0.0	2.3	2	1	0	2	2	2	0	Zinc	knuckle
ParA	PF10609.4	gi|557694446|ref|YP_008797500.1|	-	6.7e-20	70.7	0.0	1.1e-19	70.0	0.0	1.4	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|557694446|ref|YP_008797500.1|	-	5.3e-18	65.1	0.0	8e-18	64.5	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|557694446|ref|YP_008797500.1|	-	6.1e-09	36.0	0.0	1.2e-06	28.5	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|557694446|ref|YP_008797500.1|	-	8.7e-07	28.2	1.1	1.8e-05	23.9	0.3	2.2	2	0	0	2	2	2	1	Anion-transporting	ATPase
MipZ	PF09140.6	gi|557694446|ref|YP_008797500.1|	-	1.3e-05	24.4	0.1	4.9e-05	22.5	0.0	1.8	1	1	0	1	1	1	1	ATPase	MipZ
AAA_26	PF13500.1	gi|557694446|ref|YP_008797500.1|	-	0.0021	17.7	1.4	0.039	13.5	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
YopE_N	PF09020.5	gi|557694446|ref|YP_008797500.1|	-	0.022	14.7	0.0	0.041	13.9	0.0	1.4	1	0	0	1	1	1	0	YopE,	N	terminal
AAA_25	PF13481.1	gi|557694446|ref|YP_008797500.1|	-	0.049	13.0	0.0	0.08	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Fer4_NifH	PF00142.13	gi|557694446|ref|YP_008797500.1|	-	0.067	12.3	0.0	1.8	7.6	0.0	2.1	2	0	0	2	2	2	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
Fer4_18	PF13746.1	gi|557694447|ref|YP_008797501.1|	-	9.1e-17	61.2	8.8	2.5e-16	59.8	1.3	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|557694447|ref|YP_008797501.1|	-	1.7e-08	34.3	18.1	1.9e-07	31.0	7.7	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|557694447|ref|YP_008797501.1|	-	7.1e-08	32.7	8.0	0.0021	18.3	0.1	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|557694447|ref|YP_008797501.1|	-	1.4e-07	31.7	7.4	0.0016	18.7	0.1	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|557694447|ref|YP_008797501.1|	-	5.7e-07	29.7	10.7	2.4e-06	27.6	6.6	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|557694447|ref|YP_008797501.1|	-	3e-06	26.8	13.1	0.0027	17.5	2.4	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|557694447|ref|YP_008797501.1|	-	2.9e-05	23.7	14.2	0.012	15.3	0.6	2.6	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|557694447|ref|YP_008797501.1|	-	0.00048	19.6	18.8	0.0068	15.9	2.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|557694447|ref|YP_008797501.1|	-	0.00065	19.5	13.3	0.036	13.9	0.5	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|557694447|ref|YP_008797501.1|	-	0.0049	17.1	16.3	0.5	10.8	6.3	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|557694447|ref|YP_008797501.1|	-	0.01	16.3	5.6	0.01	16.3	3.9	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|557694447|ref|YP_008797501.1|	-	0.027	15.1	13.4	0.59	10.9	8.8	2.5	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Sigma70_r3	PF04539.11	gi|557694447|ref|YP_008797501.1|	-	0.032	14.1	1.3	0.096	12.5	0.3	1.9	2	0	0	2	2	2	0	Sigma-70	region	3
Fer4_15	PF13459.1	gi|557694447|ref|YP_008797501.1|	-	0.066	13.7	10.3	0.86	10.2	0.3	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|557694447|ref|YP_008797501.1|	-	0.092	13.1	11.9	1.6	9.1	3.6	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_6	PF12837.2	gi|557694447|ref|YP_008797501.1|	-	0.094	12.6	20.9	0.52	10.2	2.4	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|557694447|ref|YP_008797501.1|	-	0.91	9.1	9.2	1.5	8.4	0.1	2.5	2	0	0	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
cNMP_binding	PF00027.24	gi|557694448|ref|YP_008797502.1|	-	4e-14	52.1	0.0	7.4e-14	51.3	0.0	1.4	2	0	0	2	2	2	1	Cyclic	nucleotide-binding	domain
NAD_binding_1	PF00175.16	gi|557694449|ref|YP_008797503.1|	-	3.7e-21	75.7	0.0	5.4e-21	75.2	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
DHODB_Fe-S_bind	PF10418.4	gi|557694449|ref|YP_008797503.1|	-	9.2e-15	53.8	2.5	1.7e-14	52.9	1.7	1.5	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
FAD_binding_6	PF00970.19	gi|557694449|ref|YP_008797503.1|	-	3.4e-06	27.1	0.0	6.3e-06	26.2	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
NAD_binding_6	PF08030.7	gi|557694449|ref|YP_008797503.1|	-	0.0031	17.4	0.4	0.0083	16.0	0.0	1.9	3	0	0	3	3	3	1	Ferric	reductase	NAD	binding	domain
Oxidored_q6	PF01058.17	gi|557694450|ref|YP_008797504.1|	-	2.3e-24	85.4	0.0	3.3e-24	84.9	0.0	1.2	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
NiFeSe_Hases	PF00374.14	gi|557694451|ref|YP_008797505.1|	-	5.9e-28	97.9	0.1	1.5e-15	56.9	0.0	3.2	2	1	1	3	3	3	3	Nickel-dependent	hydrogenase
DUF3236	PF11576.3	gi|557694451|ref|YP_008797505.1|	-	0.11	11.8	0.0	0.41	10.0	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3236)
HycI	PF01750.13	gi|557694452|ref|YP_008797506.1|	-	2.6e-12	46.4	0.1	3.2e-12	46.1	0.1	1.1	1	0	0	1	1	1	1	Hydrogenase	maturation	protease
Sua5_yciO_yrdC	PF01300.13	gi|557694453|ref|YP_008797507.1|	-	7.8e-46	155.5	0.0	1.2e-45	154.9	0.0	1.3	1	0	0	1	1	1	1	Telomere	recombination
zf-HYPF	PF07503.7	gi|557694453|ref|YP_008797507.1|	-	4.1e-25	86.8	9.9	9.6e-17	60.1	0.9	2.5	2	0	0	2	2	2	2	HypF	finger
Acylphosphatase	PF00708.13	gi|557694453|ref|YP_008797507.1|	-	5.5e-24	84.0	0.1	1e-23	83.2	0.0	1.5	1	0	0	1	1	1	1	Acylphosphatase
zf-RING_4	PF14570.1	gi|557694453|ref|YP_008797507.1|	-	0.86	9.2	7.0	3.5	7.2	0.6	2.5	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
HypD	PF01924.11	gi|557694454|ref|YP_008797508.1|	-	2.8e-123	411.1	0.0	3.3e-123	410.9	0.0	1.0	1	0	0	1	1	1	1	Hydrogenase	formation	hypA	family
zf-RING_6	PF14835.1	gi|557694454|ref|YP_008797508.1|	-	0.065	13.0	0.0	0.15	11.8	0.0	1.6	1	0	0	1	1	1	0	zf-RING	of	BARD1-type	protein
MTHFR_C	PF12225.3	gi|557694454|ref|YP_008797508.1|	-	0.53	9.8	2.5	0.96	8.9	1.7	1.3	1	0	0	1	1	1	0	Methylene-tetrahydrofolate	reductase	C	terminal
HupF_HypC	PF01455.13	gi|557694455|ref|YP_008797509.1|	-	3.3e-16	59.0	0.4	4.6e-16	58.5	0.3	1.2	1	0	0	1	1	1	1	HupF/HypC	family
FhuF	PF06276.7	gi|557694455|ref|YP_008797509.1|	-	0.028	14.4	0.0	0.085	12.8	0.0	1.8	1	1	0	1	1	1	0	Ferric	iron	reductase	FhuF-like	transporter
DUF2433	PF10360.4	gi|557694455|ref|YP_008797509.1|	-	0.14	12.5	0.1	0.38	11.0	0.1	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2433)
YajC	PF02699.10	gi|557694455|ref|YP_008797509.1|	-	0.14	11.8	1.3	3.7	7.2	0.1	2.1	1	1	1	2	2	2	0	Preprotein	translocase	subunit
AIRS_C	PF02769.17	gi|557694456|ref|YP_008797510.1|	-	7.6e-21	74.7	0.1	1.1e-20	74.1	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|557694456|ref|YP_008797510.1|	-	8e-13	48.4	0.3	2.3e-12	46.9	0.2	1.8	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
IU_nuc_hydro	PF01156.14	gi|557694458|ref|YP_008797512.1|	-	1.9e-92	309.8	0.0	2.1e-92	309.6	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
CbiQ	PF02361.11	gi|557694460|ref|YP_008797514.1|	-	5.6e-25	88.2	16.7	7.6e-25	87.7	11.6	1.2	1	0	0	1	1	1	1	Cobalt	transport	protein
ABC_tran	PF00005.22	gi|557694461|ref|YP_008797515.1|	-	7e-30	104.1	0.0	1.1e-29	103.4	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694461|ref|YP_008797515.1|	-	7.1e-13	49.1	0.1	3.1e-05	24.0	0.1	2.2	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694461|ref|YP_008797515.1|	-	2e-07	30.4	0.0	9.5e-06	24.9	0.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|557694461|ref|YP_008797515.1|	-	0.00016	21.0	0.0	0.00032	20.1	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.1	gi|557694461|ref|YP_008797515.1|	-	0.00047	20.9	0.2	0.0012	19.6	0.2	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|557694461|ref|YP_008797515.1|	-	0.00098	19.4	0.0	0.0015	18.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|557694461|ref|YP_008797515.1|	-	0.0011	17.8	0.0	0.0023	16.7	0.0	1.6	1	0	0	1	1	1	1	ArgK	protein
AAA_10	PF12846.2	gi|557694461|ref|YP_008797515.1|	-	0.0013	18.2	0.1	0.39	10.1	0.0	2.2	2	0	0	2	2	2	1	AAA-like	domain
AAA_16	PF13191.1	gi|557694461|ref|YP_008797515.1|	-	0.0029	17.6	0.0	0.0044	17.0	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557694461|ref|YP_008797515.1|	-	0.0033	17.5	0.3	0.03	14.4	0.2	2.3	1	1	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.16	gi|557694461|ref|YP_008797515.1|	-	0.0038	16.4	0.1	0.071	12.2	0.0	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.12	gi|557694461|ref|YP_008797515.1|	-	0.0058	16.0	0.3	0.84	9.0	0.1	2.2	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|557694461|ref|YP_008797515.1|	-	0.017	15.4	0.1	0.032	14.5	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|557694461|ref|YP_008797515.1|	-	0.017	15.0	0.0	0.15	12.0	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
MobB	PF03205.9	gi|557694461|ref|YP_008797515.1|	-	0.019	14.6	0.1	0.055	13.1	0.1	1.9	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|557694461|ref|YP_008797515.1|	-	0.03	14.5	0.1	0.14	12.3	0.0	2.0	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|557694461|ref|YP_008797515.1|	-	0.037	13.2	0.0	0.063	12.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|557694461|ref|YP_008797515.1|	-	0.042	13.7	0.1	1.8	8.4	0.0	2.5	2	1	0	2	2	2	0	AAA	domain
MutS_V	PF00488.16	gi|557694461|ref|YP_008797515.1|	-	0.044	13.1	0.0	0.11	11.8	0.0	1.6	2	0	0	2	2	2	0	MutS	domain	V
AAA_30	PF13604.1	gi|557694461|ref|YP_008797515.1|	-	0.047	13.2	0.3	0.27	10.7	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_15	PF13175.1	gi|557694461|ref|YP_008797515.1|	-	0.069	12.1	0.0	2.6	6.9	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
ATP_bind_1	PF03029.12	gi|557694461|ref|YP_008797515.1|	-	0.072	12.6	0.1	0.18	11.2	0.0	1.7	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_25	PF13481.1	gi|557694461|ref|YP_008797515.1|	-	0.072	12.4	0.0	0.16	11.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_13	PF13166.1	gi|557694461|ref|YP_008797515.1|	-	0.097	11.1	0.1	0.23	9.8	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|557694461|ref|YP_008797515.1|	-	0.12	12.2	0.1	0.23	11.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.18	gi|557694461|ref|YP_008797515.1|	-	0.13	12.2	0.1	0.25	11.2	0.1	1.6	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
DUF3584	PF12128.3	gi|557694461|ref|YP_008797515.1|	-	0.14	9.4	0.2	0.23	8.7	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
ABC_ATPase	PF09818.4	gi|557694461|ref|YP_008797515.1|	-	0.14	10.7	0.4	0.32	9.5	0.2	1.6	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_33	PF13671.1	gi|557694461|ref|YP_008797515.1|	-	0.14	11.9	0.3	0.44	10.4	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|557694462|ref|YP_008797516.1|	-	5.1e-28	98.0	0.0	9.4e-28	97.2	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694462|ref|YP_008797516.1|	-	4.1e-10	40.1	0.0	7.1e-06	26.1	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694462|ref|YP_008797516.1|	-	3.6e-07	29.6	0.0	5.8e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|557694462|ref|YP_008797516.1|	-	1.4e-05	24.3	0.0	0.1	11.6	0.0	2.0	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_13	PF13166.1	gi|557694462|ref|YP_008797516.1|	-	6.6e-05	21.5	0.1	0.078	11.4	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
KaiC	PF06745.8	gi|557694462|ref|YP_008797516.1|	-	0.0062	15.6	0.9	1.3	8.0	0.1	2.2	2	0	0	2	2	2	1	KaiC
NACHT	PF05729.7	gi|557694462|ref|YP_008797516.1|	-	0.011	15.3	0.3	0.019	14.6	0.2	1.4	1	0	0	1	1	1	0	NACHT	domain
Mg_chelatase	PF01078.16	gi|557694462|ref|YP_008797516.1|	-	0.012	14.7	0.0	0.021	14.0	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Zeta_toxin	PF06414.7	gi|557694462|ref|YP_008797516.1|	-	0.013	14.5	0.1	0.058	12.4	0.0	2.0	2	1	0	2	2	2	0	Zeta	toxin
AAA_29	PF13555.1	gi|557694462|ref|YP_008797516.1|	-	0.015	14.8	0.2	0.029	13.9	0.2	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|557694462|ref|YP_008797516.1|	-	0.016	14.6	0.2	0.64	9.3	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|557694462|ref|YP_008797516.1|	-	0.018	15.2	0.0	0.057	13.5	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|557694462|ref|YP_008797516.1|	-	0.024	13.8	0.1	0.066	12.3	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|557694462|ref|YP_008797516.1|	-	0.031	14.2	0.2	0.097	12.6	0.1	2.1	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_18	PF13238.1	gi|557694462|ref|YP_008797516.1|	-	0.036	14.3	0.0	0.22	11.8	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|557694462|ref|YP_008797516.1|	-	0.042	13.3	1.2	0.38	10.1	0.1	2.2	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|557694462|ref|YP_008797516.1|	-	0.046	14.5	0.0	0.099	13.4	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|557694462|ref|YP_008797516.1|	-	0.053	13.1	0.9	0.83	9.1	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|557694462|ref|YP_008797516.1|	-	0.054	13.8	0.1	0.088	13.1	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
Hydrolase	PF00702.21	gi|557694462|ref|YP_008797516.1|	-	0.056	13.8	0.4	0.13	12.6	0.2	1.4	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
APS_kinase	PF01583.15	gi|557694462|ref|YP_008797516.1|	-	0.059	13.0	0.5	0.96	9.0	0.0	2.5	2	0	0	2	2	2	0	Adenylylsulphate	kinase
AAA_5	PF07728.9	gi|557694462|ref|YP_008797516.1|	-	0.065	12.9	0.3	0.39	10.4	0.0	2.3	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|557694462|ref|YP_008797516.1|	-	0.073	12.9	0.6	0.44	10.4	0.4	2.1	1	1	0	1	1	1	0	AAA	domain
Zot	PF05707.7	gi|557694462|ref|YP_008797516.1|	-	0.073	12.5	0.6	0.54	9.7	0.0	2.0	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
DUF2070	PF09843.4	gi|557694462|ref|YP_008797516.1|	-	0.079	12.4	0.1	0.56	9.6	0.1	2.0	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2070)
AAA_28	PF13521.1	gi|557694462|ref|YP_008797516.1|	-	0.081	12.8	0.0	0.21	11.5	0.0	1.9	2	0	0	2	2	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|557694462|ref|YP_008797516.1|	-	0.083	12.4	0.2	6.3	6.2	0.0	2.1	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
UPF0079	PF02367.12	gi|557694462|ref|YP_008797516.1|	-	0.086	12.4	0.2	0.2	11.2	0.1	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_14	PF13173.1	gi|557694462|ref|YP_008797516.1|	-	0.12	12.3	0.0	0.92	9.4	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
HAD	PF12710.2	gi|557694462|ref|YP_008797516.1|	-	0.13	12.4	0.0	0.36	10.9	0.0	1.4	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
NTPase_1	PF03266.10	gi|557694462|ref|YP_008797516.1|	-	0.14	11.8	1.1	3.2	7.4	0.1	2.2	2	0	0	2	2	2	0	NTPase
MobB	PF03205.9	gi|557694462|ref|YP_008797516.1|	-	0.14	11.8	0.8	0.33	10.6	0.1	2.0	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NB-ARC	PF00931.17	gi|557694462|ref|YP_008797516.1|	-	0.16	10.8	0.4	0.31	9.8	0.3	1.4	1	0	0	1	1	1	0	NB-ARC	domain
CbiA	PF01656.18	gi|557694462|ref|YP_008797516.1|	-	0.19	11.1	1.2	0.51	9.7	0.2	2.1	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_19	PF13245.1	gi|557694462|ref|YP_008797516.1|	-	1	9.1	3.2	7.3	6.4	0.3	2.8	2	2	0	2	2	2	0	Part	of	AAA	domain
PfkB	PF00294.19	gi|557694463|ref|YP_008797517.1|	-	2e-67	227.4	7.4	2.3e-67	227.2	5.2	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|557694463|ref|YP_008797517.1|	-	1.1e-11	44.4	0.3	1.5e-11	43.9	0.2	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
AAA_26	PF13500.1	gi|557694463|ref|YP_008797517.1|	-	0.15	11.6	1.9	4.5	6.8	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
HMGL-like	PF00682.14	gi|557694464|ref|YP_008797518.1|	-	2.2e-46	158.4	0.0	7.3e-46	156.7	0.0	1.8	2	0	0	2	2	2	1	HMGL-like
LeuA_dimer	PF08502.5	gi|557694464|ref|YP_008797518.1|	-	9.2e-24	83.7	0.7	2.2e-22	79.2	0.5	2.2	2	0	0	2	2	2	1	LeuA	allosteric	(dimerisation)	domain
eIF-5a	PF01287.15	gi|557694465|ref|YP_008797519.1|	-	5.8e-12	45.3	0.1	8.6e-12	44.8	0.0	1.3	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|557694465|ref|YP_008797519.1|	-	1.7e-07	30.9	0.1	1.1e-06	28.4	0.0	2.1	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
KOW	PF00467.24	gi|557694465|ref|YP_008797519.1|	-	0.016	14.9	1.6	0.067	12.9	0.2	2.4	2	0	0	2	2	2	0	KOW	motif
DUF1609	PF07753.6	gi|557694465|ref|YP_008797519.1|	-	0.017	14.4	0.1	0.023	14.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1609)
ATP_bind_4	PF01902.12	gi|557694466|ref|YP_008797520.1|	-	7.3e-70	234.7	0.0	8.2e-70	234.5	0.0	1.0	1	0	0	1	1	1	1	ATP-binding	region
Asn_synthase	PF00733.16	gi|557694466|ref|YP_008797520.1|	-	0.0017	17.8	0.0	0.0021	17.6	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.8	gi|557694466|ref|YP_008797520.1|	-	0.027	13.7	0.0	0.076	12.2	0.0	1.7	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
ATP-grasp_2	PF08442.5	gi|557694467|ref|YP_008797521.1|	-	7.4e-63	211.5	2.3	1.2e-62	210.9	1.6	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|557694467|ref|YP_008797521.1|	-	1.2e-17	63.9	0.5	2.4e-17	62.9	0.3	1.5	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.1	gi|557694467|ref|YP_008797521.1|	-	9.5e-15	54.4	2.2	1.7e-14	53.5	1.5	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|557694467|ref|YP_008797521.1|	-	1.6e-09	37.5	0.9	3.4e-09	36.5	0.6	1.5	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_4	PF13535.1	gi|557694467|ref|YP_008797521.1|	-	0.00048	19.9	0.0	0.001	18.8	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|557694467|ref|YP_008797521.1|	-	0.0014	17.9	0.1	0.0026	17.1	0.1	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.1	gi|557694467|ref|YP_008797521.1|	-	0.006	16.1	1.3	0.012	15.2	0.1	2.0	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding	PF02629.14	gi|557694468|ref|YP_008797522.1|	-	1.1e-27	96.4	2.6	1.7e-27	95.7	0.3	2.2	2	0	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|557694468|ref|YP_008797522.1|	-	1.6e-16	60.3	0.1	2.3e-16	59.7	0.0	1.2	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.1	gi|557694468|ref|YP_008797522.1|	-	3.5e-13	49.3	0.1	1.1e-12	47.7	0.0	1.8	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|557694468|ref|YP_008797522.1|	-	2.5e-08	34.0	0.3	1.4e-07	31.7	0.1	2.2	2	1	0	2	2	2	1	CoA	binding	domain
GFO_IDH_MocA	PF01408.17	gi|557694468|ref|YP_008797522.1|	-	0.0012	19.3	0.1	0.0033	17.9	0.1	1.7	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Metallophos	PF00149.23	gi|557694469|ref|YP_008797523.1|	-	4.9e-26	91.3	0.2	6.8e-26	90.9	0.1	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|557694469|ref|YP_008797523.1|	-	4.4e-08	33.1	0.0	6.2e-08	32.6	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Lactamase_B	PF00753.22	gi|557694470|ref|YP_008797524.1|	-	4.9e-16	58.9	3.2	7.8e-16	58.3	2.2	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|557694470|ref|YP_008797524.1|	-	0.00041	19.9	0.4	0.00054	19.5	0.3	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
MobB	PF03205.9	gi|557694470|ref|YP_008797524.1|	-	0.019	14.6	0.0	0.033	13.8	0.0	1.3	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Ldh_1_N	PF00056.18	gi|557694471|ref|YP_008797525.1|	-	3.7e-39	133.7	0.6	5.9e-39	133.1	0.4	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.13	gi|557694471|ref|YP_008797525.1|	-	1.2e-26	93.4	0.0	2.1e-26	92.6	0.0	1.2	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
Glyco_hydro_4	PF02056.11	gi|557694471|ref|YP_008797525.1|	-	0.0054	16.0	0.0	0.012	14.9	0.0	1.5	1	0	0	1	1	1	1	Family	4	glycosyl	hydrolase
DAO	PF01266.19	gi|557694471|ref|YP_008797525.1|	-	0.038	12.9	1.4	0.087	11.7	0.6	1.7	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|557694471|ref|YP_008797525.1|	-	0.52	9.6	4.2	2.5	7.4	1.5	2.6	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
zf-C2H2_4	PF13894.1	gi|557694472|ref|YP_008797526.1|	-	1.3e-06	28.3	0.2	1.6e-06	28.0	0.1	1.2	1	0	0	1	1	1	1	C2H2-type	zinc	finger
zf-C2H2	PF00096.21	gi|557694472|ref|YP_008797526.1|	-	5e-06	26.5	0.2	6.3e-06	26.2	0.2	1.2	1	0	0	1	1	1	1	Zinc	finger,	C2H2	type
zf-Di19	PF05605.7	gi|557694472|ref|YP_008797526.1|	-	2.1e-05	24.5	0.0	2.4e-05	24.3	0.0	1.1	1	0	0	1	1	1	1	Drought	induced	19	protein	(Di19),	zinc-binding
zf-H2C2_2	PF13465.1	gi|557694472|ref|YP_008797526.1|	-	6e-05	23.1	2.5	0.0015	18.6	0.7	2.1	2	0	0	2	2	2	1	Zinc-finger	double	domain
zf-C2H2_jaz	PF12171.3	gi|557694472|ref|YP_008797526.1|	-	8.2e-05	22.6	0.1	0.00012	22.1	0.1	1.3	1	0	0	1	1	1	1	Zinc-finger	double-stranded	RNA-binding
DUF2225	PF09986.4	gi|557694472|ref|YP_008797526.1|	-	0.0093	15.4	0.0	0.0093	15.4	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
PyrI_C	PF02748.10	gi|557694472|ref|YP_008797526.1|	-	0.0097	15.3	0.1	0.011	15.1	0.1	1.2	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
Rad50_zn_hook	PF04423.9	gi|557694472|ref|YP_008797526.1|	-	0.032	13.7	0.1	0.036	13.5	0.1	1.2	1	0	0	1	1	1	0	Rad50	zinc	hook	motif
zf-C2H2_2	PF12756.2	gi|557694472|ref|YP_008797526.1|	-	0.04	14.0	0.0	0.045	13.8	0.0	1.1	1	0	0	1	1	1	0	C2H2	type	zinc-finger	(2	copies)
zf-CHCC	PF10276.4	gi|557694472|ref|YP_008797526.1|	-	0.075	12.8	0.3	0.091	12.6	0.2	1.2	1	0	0	1	1	1	0	Zinc-finger	domain
zf-H2C2_5	PF13909.1	gi|557694472|ref|YP_008797526.1|	-	0.083	13.1	0.2	0.12	12.6	0.1	1.3	1	0	0	1	1	1	0	C2H2-type	zinc-finger	domain
zf-BED	PF02892.10	gi|557694472|ref|YP_008797526.1|	-	0.09	12.5	0.2	0.14	11.9	0.1	1.4	1	1	0	1	1	1	0	BED	zinc	finger
Peptidase_M20	PF01546.23	gi|557694473|ref|YP_008797527.1|	-	2.6e-30	105.3	0.0	3.7e-30	104.8	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|557694473|ref|YP_008797527.1|	-	1.8e-17	63.1	0.0	3.4e-17	62.1	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|557694473|ref|YP_008797527.1|	-	0.031	14.0	0.0	0.045	13.4	0.0	1.3	1	0	0	1	1	1	0	Peptidase	family	M28
zf-A20	PF01754.11	gi|557694473|ref|YP_008797527.1|	-	0.082	12.4	0.5	0.15	11.6	0.4	1.4	1	0	0	1	1	1	0	A20-like	zinc	finger
VIT1	PF01988.14	gi|557694474|ref|YP_008797528.1|	-	4.8e-17	62.1	23.4	2e-10	40.5	4.8	2.6	2	1	1	3	3	3	2	VIT	family
Rubrerythrin	PF02915.12	gi|557694474|ref|YP_008797528.1|	-	5.7e-06	26.6	5.2	0.01	16.1	0.8	2.2	2	0	0	2	2	2	2	Rubrerythrin
Ferritin	PF00210.19	gi|557694474|ref|YP_008797528.1|	-	0.00085	19.0	0.5	0.00085	19.0	0.3	1.6	2	0	0	2	2	2	1	Ferritin-like	domain
E1-E2_ATPase	PF00122.15	gi|557694474|ref|YP_008797528.1|	-	0.02	13.9	1.8	0.67	8.9	1.2	2.2	1	1	0	1	1	1	0	E1-E2	ATPase
FxsA	PF04186.8	gi|557694474|ref|YP_008797528.1|	-	0.022	14.3	1.6	0.057	13.0	1.1	1.7	1	0	0	1	1	1	0	FxsA	cytoplasmic	membrane	protein
DUF2207	PF09972.4	gi|557694474|ref|YP_008797528.1|	-	0.14	10.7	4.3	0.45	9.0	3.0	1.8	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Rab5ip	PF07019.7	gi|557694474|ref|YP_008797528.1|	-	0.26	11.4	8.2	0.093	12.8	1.4	2.5	2	0	0	2	2	2	0	Rab5-interacting	protein	(Rab5ip)
DUF3040	PF11239.3	gi|557694474|ref|YP_008797528.1|	-	0.42	10.6	2.8	0.82	9.7	0.3	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
TRC8_N	PF13705.1	gi|557694474|ref|YP_008797528.1|	-	0.51	8.8	8.0	1.7	7.1	1.7	2.8	2	1	1	3	3	3	0	TRC8	N-terminal	domain
Adeno_E3_CR2	PF02439.10	gi|557694474|ref|YP_008797528.1|	-	7.2	6.2	8.2	7.4	6.2	1.1	2.8	2	0	0	2	2	2	0	Adenovirus	E3	region	protein	CR2
Saccharop_dh	PF03435.13	gi|557694475|ref|YP_008797529.1|	-	1.4e-49	169.0	0.0	1.7e-49	168.8	0.0	1.0	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
ThiF	PF00899.16	gi|557694475|ref|YP_008797529.1|	-	2.8e-05	23.9	2.7	0.00017	21.3	1.9	2.2	1	1	0	1	1	1	1	ThiF	family
DapB_N	PF01113.15	gi|557694475|ref|YP_008797529.1|	-	0.00061	19.7	0.1	0.001	18.9	0.1	1.3	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Shikimate_DH	PF01488.15	gi|557694475|ref|YP_008797529.1|	-	0.0019	18.2	0.0	0.0046	17.0	0.0	1.7	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
3HCDH_N	PF02737.13	gi|557694475|ref|YP_008797529.1|	-	0.0053	16.4	0.1	0.01	15.5	0.1	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_3	PF03447.11	gi|557694475|ref|YP_008797529.1|	-	0.019	15.3	0.1	0.061	13.7	0.1	1.8	2	0	0	2	2	2	0	Homoserine	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|557694475|ref|YP_008797529.1|	-	0.044	13.7	0.5	0.093	12.7	0.3	1.6	1	0	0	1	1	1	0	TrkA-N	domain
OCD_Mu_crystall	PF02423.10	gi|557694475|ref|YP_008797529.1|	-	0.068	11.9	0.0	0.13	11.0	0.0	1.4	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
Peptidase_M20	PF01546.23	gi|557694476|ref|YP_008797530.1|	-	8.7e-33	113.4	0.0	1.2e-32	113.0	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M42	PF05343.9	gi|557694476|ref|YP_008797530.1|	-	3.5e-06	25.9	0.3	0.11	11.2	0.0	3.3	3	1	1	4	4	4	2	M42	glutamyl	aminopeptidase
Peptidase_M28	PF04389.12	gi|557694476|ref|YP_008797530.1|	-	2.2e-05	24.2	0.0	0.00056	19.6	0.0	2.1	2	0	0	2	2	2	1	Peptidase	family	M28
M20_dimer	PF07687.9	gi|557694476|ref|YP_008797530.1|	-	3.4e-05	23.5	0.0	6.7e-05	22.6	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Aminotran_3	PF00202.16	gi|557694477|ref|YP_008797531.1|	-	1.2e-60	205.1	0.1	2.4e-60	204.1	0.0	1.5	2	0	0	2	2	2	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|557694477|ref|YP_008797531.1|	-	0.02	13.8	0.0	0.037	12.9	0.0	1.5	1	1	0	1	1	1	0	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|557694477|ref|YP_008797531.1|	-	0.069	12.2	0.0	0.3	10.2	0.0	2.0	2	1	0	2	2	2	0	Beta-eliminating	lyase
DUF3198	PF11433.3	gi|557694477|ref|YP_008797531.1|	-	0.086	12.7	0.0	0.25	11.2	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3198)
Methyltransf_31	PF13847.1	gi|557694477|ref|YP_008797531.1|	-	0.14	11.7	0.0	0.41	10.2	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
ABC_tran	PF00005.22	gi|557694478|ref|YP_008797532.1|	-	3.2e-33	114.9	0.0	5.2e-33	114.2	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
TOBE_2	PF08402.5	gi|557694478|ref|YP_008797532.1|	-	7.2e-10	38.7	0.0	1.8e-09	37.4	0.0	1.7	1	0	0	1	1	1	1	TOBE	domain
AAA_21	PF13304.1	gi|557694478|ref|YP_008797532.1|	-	2.1e-06	27.9	0.0	0.0034	17.4	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|557694478|ref|YP_008797532.1|	-	0.0017	18.3	0.0	0.0035	17.3	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.1	gi|557694478|ref|YP_008797532.1|	-	0.0031	16.6	0.0	1.4	7.8	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
PhoH	PF02562.11	gi|557694478|ref|YP_008797532.1|	-	0.0039	16.4	0.0	0.35	10.0	0.0	2.2	2	0	0	2	2	2	1	PhoH-like	protein
DUF258	PF03193.11	gi|557694478|ref|YP_008797532.1|	-	0.0041	16.3	0.1	0.0067	15.6	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_19	PF13245.1	gi|557694478|ref|YP_008797532.1|	-	0.0045	16.7	0.0	0.0095	15.6	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
Arch_ATPase	PF01637.13	gi|557694478|ref|YP_008797532.1|	-	0.0062	16.2	0.0	0.013	15.1	0.0	1.5	1	0	0	1	1	1	1	Archaeal	ATPase
AAA	PF00004.24	gi|557694478|ref|YP_008797532.1|	-	0.012	15.7	0.1	0.057	13.6	0.0	2.0	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|557694478|ref|YP_008797532.1|	-	0.018	15.1	0.2	0.056	13.5	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|557694478|ref|YP_008797532.1|	-	0.023	13.4	0.0	0.028	13.1	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
NTPase_1	PF03266.10	gi|557694478|ref|YP_008797532.1|	-	0.023	14.3	0.3	6.3	6.4	0.0	2.9	3	0	0	3	3	3	0	NTPase
NACHT	PF05729.7	gi|557694478|ref|YP_008797532.1|	-	0.053	13.1	0.0	0.1	12.2	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_5	PF07728.9	gi|557694478|ref|YP_008797532.1|	-	0.053	13.2	0.0	0.15	11.7	0.0	1.8	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
SMC_N	PF02463.14	gi|557694478|ref|YP_008797532.1|	-	0.081	12.1	0.1	2.4	7.3	0.0	2.1	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|557694478|ref|YP_008797532.1|	-	0.086	12.3	0.0	0.19	11.3	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_28	PF13521.1	gi|557694478|ref|YP_008797532.1|	-	0.097	12.6	0.0	0.24	11.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
TOBE	PF03459.12	gi|557694478|ref|YP_008797532.1|	-	0.1	12.7	0.0	0.27	11.3	0.0	1.7	1	0	0	1	1	1	0	TOBE	domain
AAA_30	PF13604.1	gi|557694478|ref|YP_008797532.1|	-	0.13	11.7	0.0	0.24	10.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|557694478|ref|YP_008797532.1|	-	0.16	12.2	0.6	0.36	11.1	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|557694478|ref|YP_008797532.1|	-	0.16	12.2	0.1	0.34	11.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|557694478|ref|YP_008797532.1|	-	0.17	11.2	0.0	0.45	9.9	0.0	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
BPD_transp_1	PF00528.17	gi|557694479|ref|YP_008797533.1|	-	1.2e-16	60.7	18.2	1.2e-16	60.7	12.6	1.8	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
PetM	PF08041.6	gi|557694479|ref|YP_008797533.1|	-	2.3	7.7	10.9	3.8	7.0	1.3	3.1	2	0	0	2	2	2	0	PetM	family	of	cytochrome	b6f	complex	subunit	7
BPD_transp_1	PF00528.17	gi|557694480|ref|YP_008797534.1|	-	4.4e-14	52.4	15.5	4.4e-14	52.4	10.7	2.0	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_8	PF13416.1	gi|557694481|ref|YP_008797535.1|	-	7.8e-20	71.7	0.4	1.2e-19	71.1	0.3	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.1	gi|557694481|ref|YP_008797535.1|	-	4.9e-13	48.9	0.7	1.6e-08	34.1	0.2	2.4	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|557694481|ref|YP_008797535.1|	-	1.2e-09	38.4	1.9	0.00019	21.3	0.1	2.3	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.1	gi|557694481|ref|YP_008797535.1|	-	1.1e-05	25.1	0.0	0.012	15.2	0.0	2.4	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	protein
DUF641	PF04859.7	gi|557694481|ref|YP_008797535.1|	-	0.0051	16.5	0.1	3.3	7.4	0.0	2.4	2	0	0	2	2	2	2	Plant	protein	of	unknown	function	(DUF641)
Saccharop_dh	PF03435.13	gi|557694482|ref|YP_008797536.1|	-	3e-53	181.2	0.0	3.7e-53	180.9	0.0	1.1	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
Semialdhyde_dh	PF01118.19	gi|557694482|ref|YP_008797536.1|	-	2.4e-09	37.5	0.1	3.7e-09	36.9	0.1	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|557694482|ref|YP_008797536.1|	-	1.9e-07	31.3	0.1	3.2e-07	30.5	0.1	1.4	1	0	0	1	1	1	1	NADH(P)-binding
3Beta_HSD	PF01073.14	gi|557694482|ref|YP_008797536.1|	-	7.8e-05	21.5	0.1	0.00011	21.0	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Shikimate_DH	PF01488.15	gi|557694482|ref|YP_008797536.1|	-	0.00022	21.3	0.1	0.00043	20.3	0.1	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Epimerase	PF01370.16	gi|557694482|ref|YP_008797536.1|	-	0.0011	18.4	0.1	0.0016	17.9	0.1	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
DapB_N	PF01113.15	gi|557694482|ref|YP_008797536.1|	-	0.0014	18.4	0.2	0.0028	17.5	0.1	1.5	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
NmrA	PF05368.8	gi|557694482|ref|YP_008797536.1|	-	0.0023	17.2	0.5	0.0034	16.6	0.3	1.2	1	0	0	1	1	1	1	NmrA-like	family
Ldh_1_N	PF00056.18	gi|557694482|ref|YP_008797536.1|	-	0.022	14.5	0.1	0.04	13.7	0.1	1.4	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|557694482|ref|YP_008797536.1|	-	0.052	14.0	0.0	0.096	13.2	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Ald_Xan_dh_C2	PF02738.13	gi|557694483|ref|YP_008797537.1|	-	7e-152	506.5	0.0	8.6e-152	506.2	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557694483|ref|YP_008797537.1|	-	1.5e-34	118.4	0.7	3.1e-34	117.3	0.2	1.8	2	0	0	2	2	2	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Aminotran_3	PF00202.16	gi|557694484|ref|YP_008797538.1|	-	2.6e-92	309.2	0.0	6.9e-92	307.8	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class-III
VirE_N	PF08800.5	gi|557694484|ref|YP_008797538.1|	-	0.09	12.5	0.0	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	VirE	N-terminal	domain
Aminotran_3	PF00202.16	gi|557694485|ref|YP_008797539.1|	-	1.1e-69	234.8	0.0	1.6e-69	234.3	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|557694485|ref|YP_008797539.1|	-	0.0014	17.6	0.0	0.0036	16.3	0.0	1.7	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_3	PF00202.16	gi|557694486|ref|YP_008797540.1|	-	1.8e-105	352.5	0.0	2.1e-105	352.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|557694486|ref|YP_008797540.1|	-	0.081	11.8	0.0	0.32	9.8	0.0	1.8	2	0	0	2	2	2	0	Aminotransferase	class	I	and	II
Alba	PF01918.16	gi|557694486|ref|YP_008797540.1|	-	0.21	11.1	0.8	4.9	6.8	0.1	2.8	2	2	0	2	2	2	0	Alba
Lactamase_B	PF00753.22	gi|557694487|ref|YP_008797541.1|	-	8.6e-27	94.0	0.7	1.3e-26	93.4	0.5	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|557694487|ref|YP_008797541.1|	-	5e-05	22.9	0.1	7.9e-05	22.2	0.1	1.5	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|557694487|ref|YP_008797541.1|	-	0.0077	15.9	0.0	0.012	15.3	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
SRP54	PF00448.17	gi|557694487|ref|YP_008797541.1|	-	0.038	13.4	0.0	0.058	12.8	0.0	1.2	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Polysacc_deac_1	PF01522.16	gi|557694487|ref|YP_008797541.1|	-	0.045	13.3	0.0	6.5	6.4	0.0	2.4	2	0	0	2	2	2	0	Polysaccharide	deacetylase
DUF4325	PF14213.1	gi|557694489|ref|YP_008797543.1|	-	1.2e-06	28.1	0.5	2.7e-06	26.9	0.3	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4325)
MS_channel	PF00924.13	gi|557694490|ref|YP_008797544.1|	-	1.2e-13	50.9	2.1	1.7e-13	50.4	1.4	1.2	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
YfhO	PF09586.5	gi|557694490|ref|YP_008797544.1|	-	0.55	8.1	2.2	0.69	7.8	1.5	1.1	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
COX15-CtaA	PF02628.10	gi|557694490|ref|YP_008797544.1|	-	6.6	5.5	11.0	8.1	5.2	7.6	1.1	1	0	0	1	1	1	0	Cytochrome	oxidase	assembly	protein
PALP	PF00291.20	gi|557694491|ref|YP_008797545.1|	-	7.5e-56	189.5	2.1	9.4e-56	189.2	1.4	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACP_syn_III_C	PF08541.5	gi|557694491|ref|YP_008797545.1|	-	0.052	13.5	0.9	0.14	12.1	0.0	2.0	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
zinc_ribbon_2	PF13240.1	gi|557694491|ref|YP_008797545.1|	-	0.5	9.9	2.3	0.92	9.0	1.6	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
DUF1086	PF06461.6	gi|557694492|ref|YP_008797546.1|	-	0.11	12.3	0.0	0.18	11.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF1086)
Sld5	PF05916.6	gi|557694493|ref|YP_008797547.1|	-	2e-06	28.0	0.3	2.8e-06	27.5	0.2	1.2	1	0	0	1	1	1	1	GINS	complex	protein
MCM	PF00493.18	gi|557694494|ref|YP_008797548.1|	-	1e-131	438.7	0.0	1.3e-131	438.3	0.0	1.1	1	0	0	1	1	1	1	MCM2/3/5	family
MCM_N	PF14551.1	gi|557694494|ref|YP_008797548.1|	-	2.9e-18	66.4	2.2	7.2e-18	65.2	0.3	2.3	2	0	0	2	2	2	1	MCM	N-terminal	domain
Mg_chelatase	PF01078.16	gi|557694494|ref|YP_008797548.1|	-	6.4e-08	31.9	0.1	0.0015	17.7	0.0	2.3	1	1	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.9	gi|557694494|ref|YP_008797548.1|	-	3.6e-07	29.9	0.0	9.8e-07	28.5	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|557694494|ref|YP_008797548.1|	-	0.00017	21.6	0.7	0.017	15.0	0.0	2.8	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|557694494|ref|YP_008797548.1|	-	0.0011	19.2	0.1	0.004	17.3	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_3	PF07726.6	gi|557694494|ref|YP_008797548.1|	-	0.0015	18.1	0.0	0.0054	16.3	0.0	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|557694494|ref|YP_008797548.1|	-	0.0036	16.8	0.0	2.8	7.3	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_22	PF13401.1	gi|557694494|ref|YP_008797548.1|	-	0.0052	16.9	0.1	0.031	14.3	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557694494|ref|YP_008797548.1|	-	0.04	13.6	0.4	0.14	11.8	0.3	2.0	1	0	0	1	1	1	0	Part	of	AAA	domain
NACHT	PF05729.7	gi|557694494|ref|YP_008797548.1|	-	0.04	13.5	0.1	0.42	10.2	0.0	2.4	2	0	0	2	2	2	0	NACHT	domain
AAA_25	PF13481.1	gi|557694494|ref|YP_008797548.1|	-	0.077	12.3	0.2	0.41	10.0	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.10	gi|557694494|ref|YP_008797548.1|	-	0.09	12.4	0.6	15	5.2	0.0	2.6	1	1	1	2	2	2	0	NTPase
AAA_10	PF12846.2	gi|557694494|ref|YP_008797548.1|	-	0.095	12.1	0.0	0.41	10.0	0.0	1.9	1	1	0	1	1	1	0	AAA-like	domain
Miro	PF08477.8	gi|557694494|ref|YP_008797548.1|	-	0.11	12.9	0.0	0.28	11.6	0.0	1.7	1	0	0	1	1	1	0	Miro-like	protein
DEAD	PF00270.24	gi|557694495|ref|YP_008797549.1|	-	1.7e-27	96.0	0.0	1.2e-26	93.1	0.0	2.1	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
HHH_5	PF14520.1	gi|557694495|ref|YP_008797549.1|	-	1.4e-12	47.6	0.0	6.5e-12	45.4	0.0	2.2	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
HHH_2	PF12826.2	gi|557694495|ref|YP_008797549.1|	-	3.8e-09	36.2	0.0	1e-08	34.9	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Helicase_C	PF00271.26	gi|557694495|ref|YP_008797549.1|	-	2.8e-08	33.4	0.0	5.5e-08	32.5	0.0	1.5	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
Sec63	PF02889.11	gi|557694495|ref|YP_008797549.1|	-	1.2e-07	31.2	0.0	2.1e-07	30.4	0.0	1.4	1	1	0	1	1	1	1	Sec63	Brl	domain
DNA_pol_lambd_f	PF10391.4	gi|557694495|ref|YP_008797549.1|	-	3.2e-06	26.5	0.0	7.4e-06	25.4	0.0	1.5	1	0	0	1	1	1	1	Fingers	domain	of	DNA	polymerase	lambda
HHH	PF00633.18	gi|557694495|ref|YP_008797549.1|	-	1.1e-05	24.8	1.3	0.0055	16.3	0.1	2.9	3	0	0	3	3	3	2	Helix-hairpin-helix	motif
ResIII	PF04851.10	gi|557694495|ref|YP_008797549.1|	-	4.3e-05	23.4	0.0	0.00024	20.9	0.0	2.0	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Cdd1	PF11731.3	gi|557694495|ref|YP_008797549.1|	-	0.07	13.0	0.0	0.25	11.3	0.0	1.8	1	1	1	2	2	2	0	Pathogenicity	locus
RNA_pol_A_CTD	PF03118.10	gi|557694495|ref|YP_008797549.1|	-	0.071	12.5	0.0	0.16	11.3	0.0	1.7	1	0	0	1	1	1	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
HHH_3	PF12836.2	gi|557694495|ref|YP_008797549.1|	-	0.087	12.7	0.0	0.27	11.2	0.0	1.8	1	1	1	2	2	2	0	Helix-hairpin-helix	motif
KaiC	PF06745.8	gi|557694495|ref|YP_008797549.1|	-	0.1	11.6	0.0	0.19	10.8	0.0	1.4	1	0	0	1	1	1	0	KaiC
DSPc	PF00782.15	gi|557694496|ref|YP_008797550.1|	-	1.2e-21	76.6	0.0	1.4e-21	76.4	0.0	1.1	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
Y_phosphatase	PF00102.22	gi|557694496|ref|YP_008797550.1|	-	2.1e-09	37.1	0.0	2.5e-09	36.8	0.0	1.1	1	0	0	1	1	1	1	Protein-tyrosine	phosphatase
Y_phosphatase2	PF03162.8	gi|557694496|ref|YP_008797550.1|	-	2.5e-09	36.7	0.0	3.4e-09	36.2	0.0	1.1	1	0	0	1	1	1	1	Tyrosine	phosphatase	family
PTPlike_phytase	PF14566.1	gi|557694496|ref|YP_008797550.1|	-	1.4e-08	34.9	0.0	1.6e-08	34.6	0.0	1.2	1	0	0	1	1	1	1	Inositol	hexakisphosphate
CDKN3	PF05706.7	gi|557694496|ref|YP_008797550.1|	-	4e-06	26.3	0.0	5.4e-06	25.9	0.0	1.1	1	0	0	1	1	1	1	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
Y_phosphatase3	PF13350.1	gi|557694496|ref|YP_008797550.1|	-	0.00031	21.0	0.1	0.0025	18.0	0.1	2.0	1	1	1	2	2	2	1	Tyrosine	phosphatase	family
ParBc	PF02195.13	gi|557694497|ref|YP_008797551.1|	-	1.4e-06	28.3	0.1	4.7e-06	26.6	0.0	1.9	2	0	0	2	2	2	1	ParB-like	nuclease	domain
LAP2alpha	PF11560.3	gi|557694498|ref|YP_008797552.1|	-	0.096	11.8	0.0	0.096	11.8	0.0	1.0	1	0	0	1	1	1	0	Lamina-associated	polypeptide	2	alpha
Pribosyltran_N	PF13793.1	gi|557694499|ref|YP_008797553.1|	-	1.7e-34	118.0	0.3	6.9e-30	103.1	0.0	2.2	2	0	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.22	gi|557694499|ref|YP_008797553.1|	-	9.1e-16	57.7	9.4	1.3e-15	57.2	0.6	3.6	3	1	1	4	4	4	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.1	gi|557694499|ref|YP_008797553.1|	-	9.9e-08	31.9	1.3	1.8e-07	31.0	0.2	2.0	3	0	0	3	3	3	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.1	gi|557694499|ref|YP_008797553.1|	-	6.3e-07	28.8	0.4	1.4e-06	27.7	0.2	1.7	2	0	0	2	2	2	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|557694499|ref|YP_008797553.1|	-	8.3e-06	25.2	0.3	2.5e-05	23.6	0.1	1.8	1	1	1	2	2	2	1	Phosphoribosyl	transferase
AIG1	PF04548.11	gi|557694499|ref|YP_008797553.1|	-	0.12	11.5	0.1	0.19	10.8	0.1	1.2	1	0	0	1	1	1	0	AIG1	family
UPF0020	PF01170.13	gi|557694500|ref|YP_008797554.1|	-	9.7e-26	90.4	0.0	1.6e-25	89.7	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|557694500|ref|YP_008797554.1|	-	3.6e-11	43.1	0.2	3.6e-11	43.1	0.1	1.9	2	1	0	2	2	2	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|557694500|ref|YP_008797554.1|	-	3.8e-07	29.6	0.0	6.3e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
THUMP	PF02926.12	gi|557694500|ref|YP_008797554.1|	-	5e-07	29.7	0.3	7.8e-07	29.0	0.2	1.4	1	0	0	1	1	1	1	THUMP	domain
N6_N4_Mtase	PF01555.13	gi|557694500|ref|YP_008797554.1|	-	4.2e-06	26.4	0.0	2.7e-05	23.7	0.0	2.1	2	0	0	2	2	2	1	DNA	methylase
Methyltransf_15	PF09445.5	gi|557694500|ref|YP_008797554.1|	-	0.0067	15.9	0.0	0.012	15.1	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Lactamase_B_2	PF12706.2	gi|557694501|ref|YP_008797555.1|	-	8.3e-31	107.0	0.0	1.2e-30	106.5	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|557694501|ref|YP_008797555.1|	-	5.4e-11	42.4	0.1	2.5e-08	33.8	0.1	2.3	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.1	gi|557694501|ref|YP_008797555.1|	-	0.01	15.3	0.0	0.02	14.3	0.0	1.4	1	0	0	1	1	1	0	tRNase	Z	endonuclease
RNA_binding	PF01877.12	gi|557694502|ref|YP_008797556.1|	-	6.5e-21	74.5	0.1	1.1e-20	73.7	0.1	1.4	1	1	0	1	1	1	1	RNA	binding
Pyr_redox	PF00070.22	gi|557694502|ref|YP_008797556.1|	-	0.064	13.6	0.1	0.15	12.4	0.0	1.6	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
CBS	PF00571.23	gi|557694503|ref|YP_008797557.1|	-	2.2e-30	104.1	1.7	1.1e-14	53.9	0.0	2.1	2	0	0	2	2	2	2	CBS	domain
Thymidylate_kin	PF02223.12	gi|557694504|ref|YP_008797558.1|	-	2.4e-16	59.6	0.0	2.7e-15	56.2	0.0	2.0	1	1	0	1	1	1	1	Thymidylate	kinase
AAA_33	PF13671.1	gi|557694504|ref|YP_008797558.1|	-	2.6e-06	27.3	0.1	0.049	13.5	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
MobB	PF03205.9	gi|557694504|ref|YP_008797558.1|	-	0.00012	21.8	0.1	0.00026	20.7	0.1	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_18	PF13238.1	gi|557694504|ref|YP_008797558.1|	-	0.0012	19.1	1.1	0.0092	16.2	0.7	2.2	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|557694504|ref|YP_008797558.1|	-	0.0017	18.0	0.0	0.0035	16.9	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
AAA_28	PF13521.1	gi|557694504|ref|YP_008797558.1|	-	0.004	17.1	0.0	0.0071	16.3	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|557694504|ref|YP_008797558.1|	-	0.0054	16.3	0.0	0.0079	15.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|557694504|ref|YP_008797558.1|	-	0.013	15.5	0.1	0.034	14.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
Arch_ATPase	PF01637.13	gi|557694504|ref|YP_008797558.1|	-	0.025	14.2	0.3	0.043	13.5	0.2	1.9	1	1	0	1	1	1	0	Archaeal	ATPase
NTPase_1	PF03266.10	gi|557694504|ref|YP_008797558.1|	-	0.026	14.2	1.3	0.041	13.6	0.1	1.9	3	0	0	3	3	3	0	NTPase
AAA_16	PF13191.1	gi|557694504|ref|YP_008797558.1|	-	0.026	14.4	0.1	0.24	11.3	0.0	2.0	2	0	0	2	2	2	0	AAA	ATPase	domain
ArgK	PF03308.11	gi|557694504|ref|YP_008797558.1|	-	0.031	13.0	0.3	0.09	11.5	0.1	1.8	2	0	0	2	2	2	0	ArgK	protein
NB-ARC	PF00931.17	gi|557694504|ref|YP_008797558.1|	-	0.033	13.0	0.3	0.055	12.3	0.2	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA	PF00004.24	gi|557694504|ref|YP_008797558.1|	-	0.041	14.0	0.6	0.12	12.5	0.4	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|557694504|ref|YP_008797558.1|	-	0.078	12.7	0.0	0.14	11.9	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_10	PF12846.2	gi|557694504|ref|YP_008797558.1|	-	0.099	12.0	0.0	0.29	10.5	0.0	1.8	2	0	0	2	2	2	0	AAA-like	domain
AAA_17	PF13207.1	gi|557694504|ref|YP_008797558.1|	-	0.11	13.3	0.1	0.19	12.5	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
LigT_PEase	PF02834.11	gi|557694505|ref|YP_008797559.1|	-	1e-28	99.1	0.0	4.4e-19	68.2	0.0	2.1	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.1	gi|557694505|ref|YP_008797559.1|	-	1.1e-14	54.3	0.0	1.4e-14	54.0	0.0	1.2	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.4	gi|557694505|ref|YP_008797559.1|	-	3e-14	53.2	0.0	3.7e-14	52.9	0.0	1.1	1	0	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
tRNA_NucTransf2	PF09249.6	gi|557694506|ref|YP_008797560.1|	-	3.2e-35	120.4	0.0	5.5e-35	119.6	0.0	1.4	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|557694506|ref|YP_008797560.1|	-	8.5e-06	26.0	0.0	1.8e-05	25.0	0.0	1.4	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
RIO1	PF01163.17	gi|557694507|ref|YP_008797561.1|	-	5.7e-09	35.5	0.1	9.7e-09	34.8	0.1	1.4	1	0	0	1	1	1	1	RIO1	family
Pkinase_Tyr	PF07714.12	gi|557694507|ref|YP_008797561.1|	-	7.3e-06	25.2	0.3	1.1e-05	24.5	0.1	1.3	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Pkinase	PF00069.20	gi|557694507|ref|YP_008797561.1|	-	1.2e-05	24.5	0.1	2.6e-05	23.4	0.1	1.5	1	1	0	1	1	1	1	Protein	kinase	domain
Choline_kinase	PF01633.15	gi|557694507|ref|YP_008797561.1|	-	0.003	17.1	0.1	0.0037	16.8	0.1	1.1	1	0	0	1	1	1	1	Choline/ethanolamine	kinase
APH	PF01636.18	gi|557694507|ref|YP_008797561.1|	-	0.057	13.1	0.0	0.079	12.6	0.0	1.3	1	0	0	1	1	1	0	Phosphotransferase	enzyme	family
FAD-oxidase_C	PF02913.14	gi|557694508|ref|YP_008797562.1|	-	1.1e-59	201.7	0.1	1.6e-59	201.2	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|557694508|ref|YP_008797562.1|	-	2.1e-43	147.1	0.6	5.4e-43	145.8	0.1	2.0	2	0	0	2	2	2	1	FAD	binding	domain
AP_endonuc_2	PF01261.19	gi|557694508|ref|YP_008797562.1|	-	0.024	13.9	0.0	2.7	7.2	0.0	2.6	2	1	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
ROK	PF00480.15	gi|557694509|ref|YP_008797563.1|	-	1.2e-33	116.3	0.1	1.7e-33	115.9	0.0	1.2	1	0	0	1	1	1	1	ROK	family
Glucokinase	PF02685.11	gi|557694509|ref|YP_008797563.1|	-	0.00014	20.7	0.0	0.0029	16.4	0.0	2.6	1	1	0	1	1	1	1	Glucokinase
AsnC_trans_reg	PF01037.16	gi|557694510|ref|YP_008797564.1|	-	2.2e-12	46.5	0.1	5.9e-08	32.2	0.0	2.2	2	0	0	2	2	2	2	AsnC	family
DUF4460	PF14687.1	gi|557694510|ref|YP_008797564.1|	-	0.0092	15.7	0.0	0.013	15.2	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4460)
Flavin_Reduct	PF01613.13	gi|557694511|ref|YP_008797565.1|	-	1.8e-39	135.0	0.1	2.2e-39	134.7	0.1	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
DUF447	PF04289.7	gi|557694511|ref|YP_008797565.1|	-	0.022	14.3	0.0	0.025	14.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF447)
tRNA-synt_2	PF00152.15	gi|557694512|ref|YP_008797566.1|	-	3e-87	292.5	0.7	4.1e-87	292.0	0.5	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|557694512|ref|YP_008797566.1|	-	5.7e-10	38.9	1.4	1.1e-09	38.0	1.0	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2b	PF00587.20	gi|557694512|ref|YP_008797566.1|	-	0.00053	19.6	0.3	0.049	13.2	0.2	2.3	2	0	0	2	2	2	2	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
tRNA-synt_2d	PF01409.15	gi|557694512|ref|YP_008797566.1|	-	0.067	12.3	2.6	0.25	10.5	0.1	2.9	3	1	0	3	3	3	0	tRNA	synthetases	class	II	core	domain	(F)
KH_5	PF13184.1	gi|557694513|ref|YP_008797567.1|	-	0.00071	19.3	0.0	0.0018	18.0	0.0	1.7	2	0	0	2	2	2	1	NusA-like	KH	domain
DUF2225	PF09986.4	gi|557694513|ref|YP_008797567.1|	-	0.022	14.2	0.0	0.027	13.9	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
Alba	PF01918.16	gi|557694514|ref|YP_008797568.1|	-	9.2e-17	60.4	0.3	1.3e-16	59.9	0.2	1.2	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.3	gi|557694514|ref|YP_008797568.1|	-	0.0013	18.4	0.8	0.0019	17.8	0.5	1.3	1	1	0	1	1	1	1	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
UPF0137	PF03677.8	gi|557694514|ref|YP_008797568.1|	-	0.045	13.2	0.1	0.052	13.0	0.0	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0137)
Ribosomal_L40e	PF01020.12	gi|557694515|ref|YP_008797569.1|	-	6.8e-05	22.3	5.0	8.3e-05	22.1	3.4	1.1	1	0	0	1	1	1	1	Ribosomal	L40e	family
zinc_ribbon_6	PF14599.1	gi|557694515|ref|YP_008797569.1|	-	0.002	17.8	3.3	0.0038	16.9	2.3	1.6	1	1	0	1	1	1	1	Zinc-ribbon
zinc_ribbon_2	PF13240.1	gi|557694515|ref|YP_008797569.1|	-	0.0042	16.5	0.6	0.0057	16.1	0.4	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
CTV_P23	PF04808.7	gi|557694515|ref|YP_008797569.1|	-	0.008	15.5	0.9	0.008	15.5	0.7	1.0	1	0	0	1	1	1	1	Citrus	tristeza	virus	(CTV)	P23	protein
DZR	PF12773.2	gi|557694515|ref|YP_008797569.1|	-	0.0081	15.9	0.7	0.009	15.8	0.5	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|557694515|ref|YP_008797569.1|	-	0.014	14.5	1.2	0.018	14.2	0.8	1.1	1	0	0	1	1	1	0	zinc-ribbon	domain
DUF35_N	PF12172.3	gi|557694515|ref|YP_008797569.1|	-	0.056	13.3	2.6	0.48	10.4	0.2	2.1	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HypA	PF01155.14	gi|557694515|ref|YP_008797569.1|	-	0.072	12.7	0.3	0.079	12.6	0.2	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-RanBP	PF00641.13	gi|557694515|ref|YP_008797569.1|	-	0.17	11.0	2.9	0.23	10.6	2.0	1.3	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
ZZ	PF00569.12	gi|557694515|ref|YP_008797569.1|	-	0.21	11.1	2.8	0.27	10.8	1.9	1.2	1	0	0	1	1	1	0	Zinc	finger,	ZZ	type
zf-tcix	PF14952.1	gi|557694515|ref|YP_008797569.1|	-	0.87	8.9	7.7	1.1	8.6	5.2	1.5	1	1	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Ribosomal_L37e	PF01907.14	gi|557694515|ref|YP_008797569.1|	-	0.92	9.3	6.0	2.1	8.2	4.1	1.6	1	1	1	2	2	2	0	Ribosomal	protein	L37e
DUF326	PF03860.11	gi|557694515|ref|YP_008797569.1|	-	1.9	8.4	5.8	2.4	8.1	0.2	2.2	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF326)
zf-CCHC_6	PF15288.1	gi|557694515|ref|YP_008797569.1|	-	2.3	7.9	7.7	8.9	6.0	0.6	2.3	2	0	0	2	2	2	0	Zinc	knuckle
DNA_RNApol_7kD	PF03604.8	gi|557694515|ref|YP_008797569.1|	-	2.4	7.7	9.4	10	5.6	6.5	2.0	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-trcl	PF13451.1	gi|557694515|ref|YP_008797569.1|	-	2.6	7.7	10.2	3.4	7.3	2.0	2.2	1	1	1	2	2	2	0	Probable	zinc-binding	domain
zf-Sec23_Sec24	PF04810.10	gi|557694515|ref|YP_008797569.1|	-	3	7.4	6.1	2.3	7.8	0.7	2.1	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
zf-C2H2_3	PF13878.1	gi|557694515|ref|YP_008797569.1|	-	4.5	6.9	5.0	6.3	6.4	0.1	2.0	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
DNA_primase_S	PF01896.14	gi|557694516|ref|YP_008797570.1|	-	1.8e-16	60.2	0.0	6.6e-16	58.4	0.0	1.9	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
DZR	PF12773.2	gi|557694516|ref|YP_008797570.1|	-	0.28	11.0	7.9	0.5	10.2	5.5	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
A2L_zn_ribbon	PF08792.5	gi|557694516|ref|YP_008797570.1|	-	1.4	8.5	7.5	1.7	8.1	0.1	2.5	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
CBS	PF00571.23	gi|557694517|ref|YP_008797571.1|	-	3.5e-23	81.1	5.0	1.6e-14	53.3	0.2	2.3	2	0	0	2	2	2	2	CBS	domain
ArgJ	PF01960.13	gi|557694517|ref|YP_008797571.1|	-	0.0038	15.6	0.0	0.0056	15.1	0.0	1.3	1	1	0	1	1	1	1	ArgJ	family
IF3_N	PF05198.11	gi|557694517|ref|YP_008797571.1|	-	0.14	12.1	0.1	21	5.1	0.0	2.5	2	0	0	2	2	2	0	Translation	initiation	factor	IF-3,	N-terminal	domain
ORC3_N	PF07034.6	gi|557694518|ref|YP_008797572.1|	-	0.0016	17.4	0.0	0.002	17.1	0.0	1.1	1	0	0	1	1	1	1	Origin	recognition	complex	(ORC)	subunit	3	N-terminus
MobB	PF03205.9	gi|557694519|ref|YP_008797573.1|	-	0.001	18.7	0.0	0.0025	17.4	0.0	1.7	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Amidinotransf	PF02274.12	gi|557694519|ref|YP_008797573.1|	-	0.041	12.9	0.0	1.1	8.2	0.0	2.2	1	1	1	2	2	2	0	Amidinotransferase
Clp1	PF06807.9	gi|557694519|ref|YP_008797573.1|	-	0.041	13.6	0.0	3.6	7.3	0.0	2.3	2	0	0	2	2	2	0	Pre-mRNA	cleavage	complex	II	protein	Clp1
ATP_bind_1	PF03029.12	gi|557694519|ref|YP_008797573.1|	-	0.046	13.2	0.0	0.069	12.6	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA_22	PF13401.1	gi|557694519|ref|YP_008797573.1|	-	0.14	12.3	0.0	1.1	9.3	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
Elf1	PF05129.8	gi|557694521|ref|YP_008797575.1|	-	8.1e-18	63.9	0.1	9.6e-18	63.6	0.1	1.0	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|557694521|ref|YP_008797575.1|	-	1.9e-05	24.8	0.5	2.3e-05	24.5	0.3	1.2	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
DZR	PF12773.2	gi|557694521|ref|YP_008797575.1|	-	0.02	14.6	0.3	0.032	14.0	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
Rubredoxin	PF00301.15	gi|557694521|ref|YP_008797575.1|	-	0.03	14.2	0.4	0.68	9.8	0.0	2.4	2	0	0	2	2	2	0	Rubredoxin
zf-CHY	PF05495.7	gi|557694521|ref|YP_008797575.1|	-	0.032	14.3	0.1	0.036	14.2	0.0	1.2	1	0	0	1	1	1	0	CHY	zinc	finger
zf-H2C2_2	PF13465.1	gi|557694521|ref|YP_008797575.1|	-	0.13	12.6	4.4	1.3	9.4	0.3	2.7	2	1	1	3	3	3	0	Zinc-finger	double	domain
A2L_zn_ribbon	PF08792.5	gi|557694521|ref|YP_008797575.1|	-	0.13	11.7	1.7	8.5	5.9	0.1	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|557694521|ref|YP_008797575.1|	-	0.16	11.9	2.6	2.5	8.1	1.7	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|557694521|ref|YP_008797575.1|	-	0.17	11.4	2.5	0.52	9.9	1.7	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|557694521|ref|YP_008797575.1|	-	0.23	10.7	2.1	3.4	6.9	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|557694521|ref|YP_008797575.1|	-	0.29	10.8	1.4	0.57	9.8	1.0	1.6	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_4	PF13717.1	gi|557694521|ref|YP_008797575.1|	-	0.39	10.4	2.6	3.4	7.4	0.2	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
Ogr_Delta	PF04606.7	gi|557694521|ref|YP_008797575.1|	-	0.74	9.5	3.3	1.3	8.7	0.1	2.1	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
PcrB	PF01884.12	gi|557694522|ref|YP_008797576.1|	-	5.7e-67	225.3	0.8	7.3e-67	225.0	0.6	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.16	gi|557694522|ref|YP_008797576.1|	-	7.2e-10	38.5	0.6	2.6e-09	36.6	0.1	1.8	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
ThiG	PF05690.9	gi|557694522|ref|YP_008797576.1|	-	3.7e-07	29.4	4.0	0.00068	18.7	1.3	2.1	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.12	gi|557694522|ref|YP_008797576.1|	-	2.1e-06	26.8	0.5	6.9e-05	21.8	0.2	2.1	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
DHO_dh	PF01180.16	gi|557694522|ref|YP_008797576.1|	-	3.7e-06	26.1	2.1	4.7e-06	25.7	0.5	1.7	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
NanE	PF04131.9	gi|557694522|ref|YP_008797576.1|	-	2.2e-05	23.5	0.6	0.028	13.3	0.1	2.2	2	0	0	2	2	2	2	Putative	N-acetylmannosamine-6-phosphate	epimerase
Trp_syntA	PF00290.15	gi|557694522|ref|YP_008797576.1|	-	5.8e-05	21.7	0.4	0.00067	18.2	0.1	2.1	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
NMO	PF03060.10	gi|557694522|ref|YP_008797576.1|	-	0.00014	21.1	3.1	0.0093	15.1	2.2	2.2	2	0	0	2	2	2	1	Nitronate	monooxygenase
FMN_dh	PF01070.13	gi|557694522|ref|YP_008797576.1|	-	0.00018	20.4	2.9	0.00081	18.3	1.3	2.0	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|557694522|ref|YP_008797576.1|	-	0.0007	18.5	1.7	0.054	12.3	0.2	2.1	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
TMP-TENI	PF02581.12	gi|557694522|ref|YP_008797576.1|	-	0.0024	17.0	2.9	0.0096	15.0	0.3	2.3	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase/TENI
BtpA	PF03437.10	gi|557694522|ref|YP_008797576.1|	-	0.0053	16.0	1.2	1.3	8.1	0.3	2.3	2	0	0	2	2	2	2	BtpA	family
B12-binding	PF02310.14	gi|557694522|ref|YP_008797576.1|	-	0.0079	16.0	1.4	0.14	12.0	0.4	2.4	2	0	0	2	2	2	1	B12	binding	domain
Glu_synthase	PF01645.12	gi|557694522|ref|YP_008797576.1|	-	0.0085	15.0	1.1	0.014	14.3	0.1	1.7	2	0	0	2	2	2	1	Conserved	region	in	glutamate	synthase
DHDPS	PF00701.17	gi|557694522|ref|YP_008797576.1|	-	0.0088	14.6	0.5	0.019	13.5	0.0	1.7	2	0	0	2	2	2	1	Dihydrodipicolinate	synthetase	family
Ribul_P_3_epim	PF00834.14	gi|557694522|ref|YP_008797576.1|	-	0.0091	15.1	0.5	0.02	13.9	0.2	1.6	2	0	0	2	2	2	1	Ribulose-phosphate	3	epimerase	family
G3P_antiterm	PF04309.7	gi|557694522|ref|YP_008797576.1|	-	0.03	13.3	1.8	0.048	12.6	0.4	1.8	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
DUF561	PF04481.7	gi|557694522|ref|YP_008797576.1|	-	0.036	13.0	0.7	0.39	9.6	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
RNA_pol_Rpb5_C	PF01191.14	gi|557694523|ref|YP_008797577.1|	-	3e-32	110.0	0.2	3.2e-32	109.9	0.2	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
RNA_pol_Rpb2_6	PF00562.23	gi|557694524|ref|YP_008797578.1|	-	3e-116	388.3	0.0	4.9e-116	387.6	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|557694524|ref|YP_008797578.1|	-	2e-49	167.3	0.1	3.5e-49	166.4	0.0	1.5	2	0	0	2	2	2	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.9	gi|557694524|ref|YP_008797578.1|	-	3.6e-27	95.0	0.0	5.9e-27	94.3	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_3	PF04565.11	gi|557694524|ref|YP_008797578.1|	-	4.9e-25	87.0	0.0	1e-24	86.0	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_7	PF04560.15	gi|557694524|ref|YP_008797578.1|	-	5.9e-25	87.3	0.0	1.4e-24	86.1	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_4	PF04566.8	gi|557694524|ref|YP_008797578.1|	-	8.8e-18	63.8	2.4	8.8e-18	63.8	1.7	2.1	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.12	gi|557694524|ref|YP_008797578.1|	-	2.4e-14	53.0	0.2	5.2e-14	51.9	0.1	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
Auto_anti-p27	PF06677.7	gi|557694524|ref|YP_008797578.1|	-	0.0086	15.8	0.7	0.02	14.6	0.5	1.6	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
RRS1	PF04939.7	gi|557694524|ref|YP_008797578.1|	-	0.048	13.1	0.0	0.13	11.7	0.0	1.6	2	0	0	2	2	2	0	Ribosome	biogenesis	regulatory	protein	(RRS1)
SAP	PF02037.22	gi|557694524|ref|YP_008797578.1|	-	5.3	6.6	5.8	1.5	8.4	0.1	2.8	3	0	0	3	3	3	0	SAP	domain
RNA_pol_Rpb1_5	PF04998.12	gi|557694525|ref|YP_008797579.1|	-	4.2e-82	275.5	0.3	6.6e-82	274.8	0.2	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_1	PF04997.7	gi|557694525|ref|YP_008797579.1|	-	3.2e-79	266.6	0.3	3.3e-78	263.2	0.0	2.4	2	1	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.15	gi|557694525|ref|YP_008797579.1|	-	1.2e-69	233.4	0.0	5e-69	231.5	0.0	2.1	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|557694525|ref|YP_008797579.1|	-	2.9e-38	131.0	0.0	1.7e-37	128.5	0.0	2.2	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|557694525|ref|YP_008797579.1|	-	2.4e-25	88.3	1.5	9.1e-25	86.5	0.0	2.6	3	0	0	3	3	3	1	RNA	polymerase	Rpb1,	domain	4
DUF35_N	PF12172.3	gi|557694525|ref|YP_008797579.1|	-	0.12	12.2	6.3	1.6	8.7	0.0	3.4	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF4355	PF14265.1	gi|557694525|ref|YP_008797579.1|	-	0.19	11.6	2.9	0.93	9.4	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4355)
zf-ribbon_3	PF13248.1	gi|557694525|ref|YP_008797579.1|	-	0.66	9.2	5.4	0.41	9.9	0.7	2.5	2	1	0	2	2	2	0	zinc-ribbon	domain
Ribosomal_L7Ae	PF01248.21	gi|557694526|ref|YP_008797580.1|	-	4.4e-10	38.9	0.0	5e-10	38.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
KH_5	PF13184.1	gi|557694527|ref|YP_008797581.1|	-	7.9e-11	41.6	3.3	2.9e-10	39.7	0.1	2.5	2	1	1	3	3	3	1	NusA-like	KH	domain
KH_2	PF07650.12	gi|557694527|ref|YP_008797581.1|	-	1.2e-07	31.1	3.7	0.00098	18.6	0.3	2.3	1	1	1	2	2	2	2	KH	domain
KH_4	PF13083.1	gi|557694527|ref|YP_008797581.1|	-	0.00012	21.5	0.0	0.00025	20.6	0.0	1.5	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.24	gi|557694527|ref|YP_008797581.1|	-	0.0025	17.4	4.3	0.19	11.4	0.2	3.2	2	1	1	3	3	3	1	KH	domain
Ada3	PF10198.4	gi|557694527|ref|YP_008797581.1|	-	0.12	12.0	0.0	0.17	11.5	0.0	1.2	1	0	0	1	1	1	0	Histone	acetyltransferases	subunit	3
DUF4233	PF14017.1	gi|557694528|ref|YP_008797582.1|	-	6.9	6.6	15.5	2e+02	1.9	10.8	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4233)
FKBP_C	PF00254.23	gi|557694529|ref|YP_008797583.1|	-	4.5e-11	42.6	0.1	1.8e-10	40.6	0.0	2.1	2	1	0	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
Proteasome	PF00227.21	gi|557694530|ref|YP_008797584.1|	-	6.6e-52	175.5	0.0	7.5e-52	175.3	0.0	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Beta-Casp	PF10996.3	gi|557694531|ref|YP_008797585.1|	-	2.1e-30	105.2	0.0	2.8e-29	101.5	0.0	2.6	3	0	0	3	3	3	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|557694531|ref|YP_008797585.1|	-	3.5e-22	79.0	0.2	6.9e-22	78.0	0.1	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|557694531|ref|YP_008797585.1|	-	2.3e-14	52.9	0.0	5.7e-14	51.6	0.0	1.8	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|557694531|ref|YP_008797585.1|	-	2.2e-08	33.8	0.0	5.4e-08	32.6	0.0	1.7	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|557694531|ref|YP_008797585.1|	-	0.0009	18.9	0.0	0.0023	17.6	0.0	1.7	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
LSM	PF01423.17	gi|557694532|ref|YP_008797586.1|	-	1.4e-21	75.7	1.4	1.6e-21	75.5	1.0	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|557694532|ref|YP_008797586.1|	-	2.6e-07	30.4	0.1	3e-07	30.2	0.1	1.1	1	0	0	1	1	1	1	Ataxin	2	SM	domain
HET-s_218-289	PF11558.3	gi|557694532|ref|YP_008797586.1|	-	0.074	13.0	0.1	0.13	12.1	0.1	1.4	1	0	0	1	1	1	0	Het-s	218-289
DHC_N1	PF08385.7	gi|557694533|ref|YP_008797587.1|	-	0.062	11.6	0.1	0.065	11.5	0.1	1.0	1	0	0	1	1	1	0	Dynein	heavy	chain,	N-terminal	region	1
Syntaxin	PF00804.20	gi|557694533|ref|YP_008797587.1|	-	0.084	13.0	0.7	0.092	12.9	0.5	1.2	1	0	0	1	1	1	0	Syntaxin
Tektin	PF03148.9	gi|557694533|ref|YP_008797587.1|	-	0.089	11.3	1.1	0.1	11.0	0.8	1.2	1	0	0	1	1	1	0	Tektin	family
Rootletin	PF15035.1	gi|557694533|ref|YP_008797587.1|	-	0.15	12.0	1.2	0.15	12.0	0.8	1.0	1	0	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
YojJ	PF10372.4	gi|557694533|ref|YP_008797587.1|	-	0.19	11.5	0.9	0.25	11.2	0.6	1.3	1	0	0	1	1	1	0	Bacterial	membrane-spanning	protein	N-terminus
Spc7	PF08317.6	gi|557694533|ref|YP_008797587.1|	-	0.21	10.1	2.0	0.24	10.0	1.4	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
SPT6_acidic	PF14632.1	gi|557694533|ref|YP_008797587.1|	-	0.34	11.1	3.0	0.38	10.9	2.1	1.2	1	0	0	1	1	1	0	Acidic	N-terminal	SPT6
PspB	PF06667.7	gi|557694533|ref|YP_008797587.1|	-	0.35	10.8	2.1	0.52	10.2	1.5	1.4	1	0	0	1	1	1	0	Phage	shock	protein	B
zf-C4H2	PF10146.4	gi|557694533|ref|YP_008797587.1|	-	0.43	10.5	2.1	0.43	10.5	1.4	1.1	1	0	0	1	1	1	0	Zinc	finger-containing	protein
Latarcin	PF10279.4	gi|557694533|ref|YP_008797587.1|	-	0.44	10.7	4.8	1.6	8.9	3.4	1.8	1	1	0	1	1	1	0	Latarcin	precursor
DUF3782	PF12644.2	gi|557694533|ref|YP_008797587.1|	-	0.85	9.4	5.1	1.2	8.9	3.5	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
DUF904	PF06005.7	gi|557694533|ref|YP_008797587.1|	-	0.88	9.9	4.4	1.3	9.3	3.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF904)
DivIC	PF04977.10	gi|557694533|ref|YP_008797587.1|	-	1.3	8.5	6.2	0.55	9.7	2.4	1.6	2	0	0	2	2	2	0	Septum	formation	initiator
Pox_A_type_inc	PF04508.7	gi|557694533|ref|YP_008797587.1|	-	1.4	8.9	10.3	0.49	10.3	1.8	2.8	3	0	0	3	3	3	0	Viral	A-type	inclusion	protein	repeat
XhlA	PF10779.4	gi|557694533|ref|YP_008797587.1|	-	1.6	8.6	4.7	2.4	8.1	3.3	1.3	1	0	0	1	1	1	0	Haemolysin	XhlA
Plasmid_stabil	PF05016.9	gi|557694534|ref|YP_008797588.1|	-	3.4e-06	27.3	0.7	4.1e-06	27.1	0.5	1.1	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
Gp49	PF05973.9	gi|557694534|ref|YP_008797588.1|	-	0.0078	16.2	0.1	0.0098	15.8	0.1	1.2	1	0	0	1	1	1	1	Phage	derived	protein	Gp49-like	(DUF891)
SPOR	PF05036.8	gi|557694534|ref|YP_008797588.1|	-	0.026	14.7	0.0	0.037	14.1	0.0	1.4	1	1	0	1	1	1	0	Sporulation	related	domain
DUF3014	PF11219.3	gi|557694534|ref|YP_008797588.1|	-	0.078	12.8	0.0	0.082	12.7	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3014)
Ribosomal_L37e	PF01907.14	gi|557694535|ref|YP_008797589.1|	-	2.2e-23	81.7	9.9	2.3e-23	81.7	6.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.2	gi|557694535|ref|YP_008797589.1|	-	0.00033	20.4	1.1	0.00038	20.2	0.8	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
DNA_RNApol_7kD	PF03604.8	gi|557694535|ref|YP_008797589.1|	-	0.00076	18.9	9.2	0.0011	18.3	1.8	2.2	1	1	1	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn-ribbon_8	PF09723.5	gi|557694535|ref|YP_008797589.1|	-	0.014	15.3	0.1	2.8	7.9	0.1	2.1	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|557694535|ref|YP_008797589.1|	-	0.02	14.0	3.7	0.037	13.2	2.5	1.5	1	1	0	1	1	1	0	zinc-ribbon	domain
HypA	PF01155.14	gi|557694535|ref|YP_008797589.1|	-	0.022	14.4	0.6	0.024	14.3	0.4	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_6	PF14599.1	gi|557694535|ref|YP_008797589.1|	-	0.036	13.8	1.0	0.047	13.4	0.7	1.2	1	0	0	1	1	1	0	Zinc-ribbon
ArfGap	PF01412.13	gi|557694535|ref|YP_008797589.1|	-	0.069	12.9	1.1	0.069	12.9	0.8	1.6	1	1	1	2	2	2	0	Putative	GTPase	activating	protein	for	Arf
UPF0547	PF10571.4	gi|557694535|ref|YP_008797589.1|	-	0.09	12.4	7.3	0.72	9.5	0.3	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
ProRS-C_1	PF09180.6	gi|557694535|ref|YP_008797589.1|	-	0.21	11.5	1.2	0.33	10.9	0.9	1.5	1	1	0	1	1	1	0	Prolyl-tRNA	synthetase,	C-terminal
zf-RING_5	PF14634.1	gi|557694535|ref|YP_008797589.1|	-	0.41	10.3	4.7	0.55	10.0	3.3	1.1	1	0	0	1	1	1	0	zinc-RING	finger	domain
zinc_ribbon_2	PF13240.1	gi|557694535|ref|YP_008797589.1|	-	0.45	10.0	6.3	5.2	6.6	4.3	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|557694535|ref|YP_008797589.1|	-	0.5	10.0	2.7	5	6.8	0.2	2.2	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-C3HC4_2	PF13923.1	gi|557694535|ref|YP_008797589.1|	-	0.75	9.8	5.9	1	9.4	4.1	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF35_N	PF12172.3	gi|557694535|ref|YP_008797589.1|	-	1	9.3	5.9	1.3	9.0	4.1	1.2	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_4	PF13717.1	gi|557694535|ref|YP_008797589.1|	-	1.6	8.5	5.4	1.3	8.7	0.5	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
PyrI_C	PF02748.10	gi|557694535|ref|YP_008797589.1|	-	2	7.9	5.3	4.2	6.8	0.8	2.0	1	1	1	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
ZF-HD_dimer	PF04770.7	gi|557694535|ref|YP_008797589.1|	-	2	8.5	8.0	0.62	10.1	3.5	1.6	1	1	1	2	2	2	0	ZF-HD	protein	dimerisation	region
zinc_ribbon_5	PF13719.1	gi|557694535|ref|YP_008797589.1|	-	9	5.9	7.7	3.1	7.4	1.3	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
Acyltransferase	PF01553.16	gi|557694536|ref|YP_008797590.1|	-	0.13	11.6	0.0	2.7	7.4	0.0	2.1	2	0	0	2	2	2	0	Acyltransferase
Glyco_tranf_2_3	PF13641.1	gi|557694537|ref|YP_008797591.1|	-	1.2e-39	136.4	0.0	1.7e-39	135.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|557694537|ref|YP_008797591.1|	-	2.3e-24	86.1	2.3	2.3e-24	86.1	1.6	2.4	3	0	0	3	3	3	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|557694537|ref|YP_008797591.1|	-	4.8e-22	78.4	0.0	7.7e-22	77.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|557694537|ref|YP_008797591.1|	-	1.2e-12	47.4	0.0	2.1e-12	46.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Cellulose_synt	PF03552.9	gi|557694537|ref|YP_008797591.1|	-	1.2e-05	23.8	2.9	6.8e-05	21.3	0.4	2.1	2	0	0	2	2	2	1	Cellulose	synthase
Glyco_tranf_2_2	PF10111.4	gi|557694537|ref|YP_008797591.1|	-	3.8e-05	22.9	0.0	6.9e-05	22.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|557694537|ref|YP_008797591.1|	-	0.0018	18.5	0.0	0.0049	17.1	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Tweety	PF04906.8	gi|557694537|ref|YP_008797591.1|	-	0.31	9.4	6.2	0.051	11.9	0.4	2.2	3	0	0	3	3	3	0	Tweety
Radical_SAM	PF04055.16	gi|557694539|ref|YP_008797593.1|	-	1.2e-26	93.8	0.9	2.4e-26	92.8	0.4	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|557694539|ref|YP_008797593.1|	-	9.9e-19	67.3	0.0	7.4e-18	64.5	0.0	2.1	2	0	0	2	2	2	1	B12	binding	domain
DoxX	PF07681.7	gi|557694540|ref|YP_008797594.1|	-	0.0033	17.8	3.5	0.0033	17.8	2.4	3.2	1	1	2	3	3	3	2	DoxX
Pox_A9	PF04835.7	gi|557694541|ref|YP_008797595.1|	-	4	7.4	8.6	0.079	12.8	0.9	1.9	2	0	0	2	2	2	0	A9	protein	conserved	region
DUF2964	PF11177.3	gi|557694542|ref|YP_008797596.1|	-	0.16	11.8	7.4	0.43	10.5	1.3	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2964)
DUF3754	PF12576.3	gi|557694542|ref|YP_008797596.1|	-	0.16	11.5	1.9	0.32	10.6	1.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3754)
IGPD	PF00475.13	gi|557694543|ref|YP_008797597.1|	-	5.4e-52	175.5	2.1	7.6e-52	175.0	1.5	1.2	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
Fae	PF08714.6	gi|557694543|ref|YP_008797597.1|	-	0.025	14.2	0.2	0.17	11.5	0.1	2.1	1	1	1	2	2	2	0	Formaldehyde-activating	enzyme	(Fae)
HisG	PF01634.13	gi|557694544|ref|YP_008797598.1|	-	6.9e-36	123.2	0.0	9.9e-36	122.7	0.0	1.2	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.6	gi|557694544|ref|YP_008797598.1|	-	2.7e-16	59.2	0.0	7.4e-16	57.8	0.0	1.7	1	0	0	1	1	1	1	HisG,	C-terminal	domain
GATase	PF00117.23	gi|557694545|ref|YP_008797599.1|	-	2e-28	99.1	0.0	2.2e-28	99.0	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.9	gi|557694545|ref|YP_008797599.1|	-	2.4e-06	27.2	0.0	3.7e-06	26.6	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_C26	PF07722.8	gi|557694545|ref|YP_008797599.1|	-	0.0011	18.4	2.2	0.037	13.4	0.1	2.8	2	2	1	3	3	3	2	Peptidase	C26
PRA-CH	PF01502.13	gi|557694546|ref|YP_008797600.1|	-	1e-36	124.3	0.0	1.3e-36	124.0	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
DUF98	PF01947.11	gi|557694546|ref|YP_008797600.1|	-	0.051	13.3	0.0	0.065	12.9	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF98)
His_biosynth	PF00977.16	gi|557694547|ref|YP_008797601.1|	-	5.6e-87	290.7	1.0	6.3e-87	290.6	0.7	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
ThiG	PF05690.9	gi|557694547|ref|YP_008797601.1|	-	1.1e-08	34.5	3.8	0.00055	19.0	0.3	2.2	1	1	1	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.10	gi|557694547|ref|YP_008797601.1|	-	6.9e-08	32.0	2.1	0.0012	18.0	0.4	2.2	2	0	0	2	2	2	2	Nitronate	monooxygenase
Dus	PF01207.12	gi|557694547|ref|YP_008797601.1|	-	1.4e-07	30.6	0.1	0.0036	16.1	0.1	2.2	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
PcrB	PF01884.12	gi|557694547|ref|YP_008797601.1|	-	2.3e-06	27.0	0.7	0.00018	20.8	0.1	2.2	2	0	0	2	2	2	1	PcrB	family
DHO_dh	PF01180.16	gi|557694547|ref|YP_008797601.1|	-	6.9e-06	25.2	0.1	0.0014	17.6	0.0	2.1	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
TMP-TENI	PF02581.12	gi|557694547|ref|YP_008797601.1|	-	1.3e-05	24.4	0.5	0.08	12.0	0.0	2.3	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase/TENI
Oxidored_FMN	PF00724.15	gi|557694547|ref|YP_008797601.1|	-	0.032	13.2	0.0	0.48	9.3	0.0	2.0	2	0	0	2	2	2	0	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
IMPDH	PF00478.20	gi|557694547|ref|YP_008797601.1|	-	0.037	12.9	3.7	1.2	7.9	0.2	2.1	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
FMN_dh	PF01070.13	gi|557694547|ref|YP_008797601.1|	-	0.044	12.6	4.8	1	8.1	0.4	2.3	2	1	0	2	2	2	0	FMN-dependent	dehydrogenase
Kelch_5	PF13854.1	gi|557694547|ref|YP_008797601.1|	-	0.061	13.2	0.1	0.16	11.9	0.1	1.7	1	0	0	1	1	1	0	Kelch	motif
NanE	PF04131.9	gi|557694547|ref|YP_008797601.1|	-	0.068	12.1	0.4	5.2	6.0	0.1	2.3	2	0	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
Trp_syntA	PF00290.15	gi|557694547|ref|YP_008797601.1|	-	0.074	11.5	1.2	0.13	10.7	0.2	1.7	2	0	0	2	2	2	0	Tryptophan	synthase	alpha	chain
G3P_antiterm	PF04309.7	gi|557694547|ref|YP_008797601.1|	-	0.076	12.0	0.4	0.19	10.7	0.1	1.7	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
PEP_mutase	PF13714.1	gi|557694547|ref|YP_008797601.1|	-	0.44	9.7	4.2	3	7.0	0.3	3.2	2	2	1	4	4	4	0	Phosphoenolpyruvate	phosphomutase
His_biosynth	PF00977.16	gi|557694548|ref|YP_008797602.1|	-	3e-52	177.1	0.3	3.3e-52	177.0	0.2	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
CDP-OH_P_transf	PF01066.16	gi|557694548|ref|YP_008797602.1|	-	0.0048	17.1	0.5	0.012	15.8	0.2	1.7	1	1	0	1	1	1	1	CDP-alcohol	phosphatidyltransferase
PcrB	PF01884.12	gi|557694548|ref|YP_008797602.1|	-	0.13	11.4	0.9	8.5	5.5	0.0	2.3	2	1	0	2	2	2	0	PcrB	family
Uso1_p115_C	PF04871.8	gi|557694550|ref|YP_008797604.1|	-	0.028	14.3	2.3	0.061	13.2	1.6	1.6	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
Polyoma_coat	PF00718.15	gi|557694550|ref|YP_008797604.1|	-	0.058	12.2	0.0	0.099	11.5	0.0	1.3	1	0	0	1	1	1	0	Polyomavirus	coat	protein
DUF4392	PF14336.1	gi|557694551|ref|YP_008797605.1|	-	4.2e-54	183.3	0.2	5.2e-54	183.0	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4392)
KaiC	PF06745.8	gi|557694552|ref|YP_008797606.1|	-	7.2e-56	188.8	0.0	9e-56	188.5	0.0	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|557694552|ref|YP_008797606.1|	-	3.1e-10	39.7	0.0	4.4e-10	39.2	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|557694552|ref|YP_008797606.1|	-	0.00012	21.2	0.0	0.00029	19.9	0.0	1.6	2	0	0	2	2	2	1	recA	bacterial	DNA	recombination	protein
PAXNEB	PF05625.6	gi|557694552|ref|YP_008797606.1|	-	0.00048	19.0	0.1	0.00081	18.3	0.1	1.3	1	0	0	1	1	1	1	PAXNEB	protein
ATP-synt_ab	PF00006.20	gi|557694552|ref|YP_008797606.1|	-	0.0005	19.6	0.0	0.00079	18.9	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
GvpD	PF07088.6	gi|557694552|ref|YP_008797606.1|	-	0.0013	17.1	0.6	0.45	8.7	0.1	2.1	2	0	0	2	2	2	2	GvpD	gas	vesicle	protein
T2SE	PF00437.15	gi|557694552|ref|YP_008797606.1|	-	0.0029	16.5	0.0	0.0045	15.9	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|557694552|ref|YP_008797606.1|	-	0.0046	17.0	0.1	0.012	15.7	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|557694552|ref|YP_008797606.1|	-	0.0084	16.0	0.1	0.04	13.8	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
DEAD	PF00270.24	gi|557694552|ref|YP_008797606.1|	-	0.0098	15.3	0.0	0.014	14.9	0.0	1.3	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
MEDS	PF14417.1	gi|557694552|ref|YP_008797606.1|	-	0.011	14.8	0.0	0.017	14.1	0.0	1.2	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
Rad51	PF08423.6	gi|557694552|ref|YP_008797606.1|	-	0.014	14.2	0.1	0.072	11.9	0.0	1.9	2	0	0	2	2	2	0	Rad51
AAA_16	PF13191.1	gi|557694552|ref|YP_008797606.1|	-	0.06	13.3	0.1	0.47	10.4	0.1	2.1	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|557694552|ref|YP_008797606.1|	-	0.068	12.5	0.1	0.18	11.2	0.0	1.7	2	1	0	2	2	2	0	AAA-like	domain
IstB_IS21	PF01695.12	gi|557694552|ref|YP_008797606.1|	-	0.099	12.0	0.0	0.16	11.3	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF2075	PF09848.4	gi|557694552|ref|YP_008797606.1|	-	0.11	11.4	0.1	0.16	10.9	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
DAP3	PF10236.4	gi|557694552|ref|YP_008797606.1|	-	0.12	11.3	0.0	0.22	10.4	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
Zot	PF05707.7	gi|557694552|ref|YP_008797606.1|	-	0.15	11.5	0.0	0.2	11.0	0.0	1.3	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
PolC_DP2	PF03833.8	gi|557694553|ref|YP_008797607.1|	-	2.2e-270	899.2	0.8	6e-268	891.1	0.0	2.7	2	1	0	2	2	2	1	DNA	polymerase	II	large	subunit	DP2
HNH_5	PF14279.1	gi|557694553|ref|YP_008797607.1|	-	0.021	14.8	5.9	2.1	8.3	0.0	3.5	3	0	0	3	3	3	0	HNH	endonuclease
FlgN	PF05130.7	gi|557694553|ref|YP_008797607.1|	-	0.028	14.6	0.0	0.081	13.1	0.0	1.7	1	0	0	1	1	1	0	FlgN	protein
zf-DNA_Pol	PF08996.5	gi|557694553|ref|YP_008797607.1|	-	0.078	12.3	4.4	1.1	8.6	1.1	2.6	2	0	0	2	2	2	0	DNA	Polymerase	alpha	zinc	finger
Mu-like_Com	PF10122.4	gi|557694553|ref|YP_008797607.1|	-	0.42	9.7	7.2	0.043	12.8	0.7	2.4	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
zinc-ribbons_6	PF07191.7	gi|557694553|ref|YP_008797607.1|	-	0.67	9.7	11.4	1	9.1	0.2	2.5	2	0	0	2	2	2	0	zinc-ribbons
DZR	PF12773.2	gi|557694553|ref|YP_008797607.1|	-	2.3	8.1	20.3	6.7	6.6	0.8	2.8	2	1	0	2	2	2	0	Double	zinc	ribbon
HTH_5	PF01022.15	gi|557694554|ref|YP_008797608.1|	-	1e-07	31.5	0.5	1.4e-07	31.0	0.4	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|557694554|ref|YP_008797608.1|	-	2.5e-05	23.5	0.1	3.5e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
FaeA	PF04703.7	gi|557694554|ref|YP_008797608.1|	-	5.4e-05	23.2	0.1	0.00019	21.5	0.0	1.8	1	1	1	2	2	2	1	FaeA-like	protein
HTH_20	PF12840.2	gi|557694554|ref|YP_008797608.1|	-	5.9e-05	22.7	0.5	8.1e-05	22.3	0.3	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|557694554|ref|YP_008797608.1|	-	0.0009	19.3	0.1	0.001	19.1	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
TrmB	PF01978.14	gi|557694554|ref|YP_008797608.1|	-	0.0019	17.8	0.0	0.0031	17.1	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.12	gi|557694554|ref|YP_008797608.1|	-	0.0023	17.3	0.0	0.0027	17.1	0.0	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_IclR	PF09339.5	gi|557694554|ref|YP_008797608.1|	-	0.0056	16.2	0.0	0.0081	15.7	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|557694554|ref|YP_008797608.1|	-	0.026	13.9	0.1	0.043	13.2	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_29	PF13551.1	gi|557694554|ref|YP_008797608.1|	-	0.034	14.3	0.3	0.041	14.0	0.2	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
Sulfolobus_pRN	PF05584.6	gi|557694554|ref|YP_008797608.1|	-	0.041	13.8	0.3	0.051	13.5	0.2	1.1	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
CENP-B_N	PF04218.8	gi|557694554|ref|YP_008797608.1|	-	0.052	12.9	0.1	0.08	12.3	0.0	1.4	1	0	0	1	1	1	0	CENP-B	N-terminal	DNA-binding	domain
HTH_9	PF08221.6	gi|557694554|ref|YP_008797608.1|	-	0.069	13.0	0.3	0.11	12.4	0.0	1.5	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
MerR_1	PF13411.1	gi|557694554|ref|YP_008797608.1|	-	0.072	12.8	0.1	0.12	12.2	0.1	1.4	1	0	0	1	1	1	0	MerR	HTH	family	regulatory	protein
Sec61_beta	PF03911.11	gi|557694555|ref|YP_008797609.1|	-	9.5e-15	54.1	0.1	1.1e-14	53.9	0.1	1.1	1	0	0	1	1	1	1	Sec61beta	family
Lactamase_B_2	PF12706.2	gi|557694556|ref|YP_008797610.1|	-	8.1e-07	28.7	0.2	7.8e-06	25.5	0.2	2.4	2	2	1	3	3	3	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|557694556|ref|YP_008797610.1|	-	8.6e-06	25.4	0.0	3.6e-05	23.4	0.0	2.1	2	0	0	2	2	2	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B	PF00753.22	gi|557694556|ref|YP_008797610.1|	-	0.0058	16.3	1.4	0.029	14.0	1.1	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
DUF2070	PF09843.4	gi|557694557|ref|YP_008797611.1|	-	3.8e-30	104.6	0.1	6.1e-30	104.0	0.0	1.3	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
F420_oxidored	PF03807.12	gi|557694557|ref|YP_008797611.1|	-	0.08	13.3	0.0	0.37	11.2	0.0	2.2	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
ASFV_L11L	PF05293.6	gi|557694557|ref|YP_008797611.1|	-	0.22	11.6	3.2	0.55	10.3	0.3	2.9	3	0	0	3	3	3	0	African	swine	fever	virus	(ASFV)	L11L	protein
PqqD	PF05402.7	gi|557694558|ref|YP_008797612.1|	-	4.1e-09	36.3	0.6	5.4e-09	35.9	0.4	1.1	1	0	0	1	1	1	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
DUF479	PF04336.7	gi|557694558|ref|YP_008797612.1|	-	0.12	12.4	0.0	0.18	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF479
Alba	PF01918.16	gi|557694559|ref|YP_008797613.1|	-	2.1e-07	30.4	0.4	3e-07	29.9	0.0	1.4	2	0	0	2	2	2	1	Alba
Acyl-CoA_dh_1	PF00441.19	gi|557694560|ref|YP_008797614.1|	-	1.8e-34	119.0	1.9	2.8e-34	118.3	1.3	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|557694560|ref|YP_008797614.1|	-	5.1e-27	94.6	0.1	1.3e-26	93.3	0.1	1.7	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|557694560|ref|YP_008797614.1|	-	8.6e-15	55.1	0.4	8.6e-15	55.1	0.3	1.6	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|557694560|ref|YP_008797614.1|	-	1.8e-10	40.1	0.0	3.3e-10	39.3	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
NAD_synthase	PF02540.12	gi|557694561|ref|YP_008797615.1|	-	2.8e-73	245.8	0.0	3.3e-73	245.5	0.0	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|557694561|ref|YP_008797615.1|	-	7.4e-07	28.0	0.0	8.1e-05	21.3	0.0	2.3	2	0	0	2	2	2	2	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|557694561|ref|YP_008797615.1|	-	2.3e-05	24.0	0.0	3.1e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.8	gi|557694561|ref|YP_008797615.1|	-	0.043	13.1	0.0	0.079	12.2	0.0	1.4	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
IncA	PF04156.9	gi|557694562|ref|YP_008797616.1|	-	2.1e-07	30.7	34.7	5.7e-05	22.7	8.3	3.0	1	1	2	3	3	3	2	IncA	protein
GAS	PF13851.1	gi|557694562|ref|YP_008797616.1|	-	2e-06	27.1	28.8	8e-06	25.1	9.3	2.1	1	1	1	2	2	2	2	Growth-arrest	specific	micro-tubule	binding
Tropomyosin_1	PF12718.2	gi|557694562|ref|YP_008797616.1|	-	6.2e-06	26.1	11.8	6.2e-06	26.1	8.2	2.0	1	1	0	2	2	2	1	Tropomyosin	like
DivIC	PF04977.10	gi|557694562|ref|YP_008797616.1|	-	2.7e-05	23.5	22.0	0.018	14.4	1.7	4.5	1	1	2	4	4	4	2	Septum	formation	initiator
APG6	PF04111.7	gi|557694562|ref|YP_008797616.1|	-	3.7e-05	22.9	19.3	5.3e-05	22.4	7.4	2.1	1	1	1	2	2	2	1	Autophagy	protein	Apg6
Spectrin	PF00435.16	gi|557694562|ref|YP_008797616.1|	-	4.1e-05	23.8	13.7	0.0024	18.1	1.1	2.6	1	1	1	2	2	2	2	Spectrin	repeat
BicD	PF09730.4	gi|557694562|ref|YP_008797616.1|	-	4.5e-05	22.0	10.9	5.7e-05	21.6	7.6	1.0	1	0	0	1	1	1	1	Microtubule-associated	protein	Bicaudal-D
ATG16	PF08614.6	gi|557694562|ref|YP_008797616.1|	-	4.6e-05	23.3	21.3	0.00021	21.1	9.5	2.1	1	1	1	2	2	2	1	Autophagy	protein	16	(ATG16)
AAA_13	PF13166.1	gi|557694562|ref|YP_008797616.1|	-	4.6e-05	22.0	6.3	7.6e-05	21.3	4.3	1.3	1	0	0	1	1	1	1	AAA	domain
TBPIP	PF07106.8	gi|557694562|ref|YP_008797616.1|	-	0.00013	21.5	15.3	0.0013	18.3	5.5	2.3	1	1	1	2	2	2	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
EzrA	PF06160.7	gi|557694562|ref|YP_008797616.1|	-	0.00014	20.1	15.7	0.00021	19.6	10.9	1.2	1	0	0	1	1	1	1	Septation	ring	formation	regulator,	EzrA
DUF904	PF06005.7	gi|557694562|ref|YP_008797616.1|	-	0.00017	21.8	1.0	0.00017	21.8	0.7	3.4	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF904)
DUF948	PF06103.6	gi|557694562|ref|YP_008797616.1|	-	0.00018	21.3	1.8	0.00018	21.3	1.3	3.3	3	0	0	3	3	3	1	Bacterial	protein	of	unknown	function	(DUF948)
TPR_MLP1_2	PF07926.7	gi|557694562|ref|YP_008797616.1|	-	0.00019	21.2	20.7	0.0053	16.5	7.9	2.5	1	1	1	2	2	2	2	TPR/MLP1/MLP2-like	protein
DUF4201	PF13870.1	gi|557694562|ref|YP_008797616.1|	-	0.00022	20.7	13.6	0.00022	20.7	9.4	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4201)
CENP-F_leu_zip	PF10473.4	gi|557694562|ref|YP_008797616.1|	-	0.00023	21.0	17.5	0.046	13.5	5.1	2.9	1	1	0	2	2	2	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
ADIP	PF11559.3	gi|557694562|ref|YP_008797616.1|	-	0.00038	20.3	22.1	0.017	15.0	7.3	2.4	1	1	1	2	2	2	2	Afadin-	and	alpha	-actinin-Binding
WEMBL	PF05701.6	gi|557694562|ref|YP_008797616.1|	-	0.00044	18.8	10.4	0.00066	18.2	7.2	1.2	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
PspA_IM30	PF04012.7	gi|557694562|ref|YP_008797616.1|	-	0.00069	19.0	15.3	0.026	13.8	3.4	2.1	1	1	1	2	2	2	2	PspA/IM30	family
Spc7	PF08317.6	gi|557694562|ref|YP_008797616.1|	-	0.00073	18.3	16.2	0.021	13.5	0.9	2.2	1	1	1	2	2	2	2	Spc7	kinetochore	protein
DUF4254	PF14063.1	gi|557694562|ref|YP_008797616.1|	-	0.00096	18.7	6.2	0.00096	18.7	4.3	1.8	2	0	0	2	2	1	1	Protein	of	unknown	function	(DUF4254)
Reo_sigmaC	PF04582.7	gi|557694562|ref|YP_008797616.1|	-	0.0017	17.6	4.7	0.078	12.1	0.8	2.1	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
Bacillus_HBL	PF05791.6	gi|557694562|ref|YP_008797616.1|	-	0.0017	17.7	9.8	0.0024	17.2	2.3	2.2	2	0	0	2	2	2	1	Bacillus	haemolytic	enterotoxin	(HBL)
DUF869	PF05911.6	gi|557694562|ref|YP_008797616.1|	-	0.0017	16.6	5.4	0.0017	16.6	3.7	1.6	1	1	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
DUF812	PF05667.6	gi|557694562|ref|YP_008797616.1|	-	0.0019	16.8	10.8	0.0025	16.3	7.5	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF812)
DUF2353	PF09789.4	gi|557694562|ref|YP_008797616.1|	-	0.0024	17.1	12.8	0.13	11.4	3.0	2.1	1	1	1	2	2	2	2	Uncharacterized	coiled-coil	protein	(DUF2353)
Ead_Ea22	PF13935.1	gi|557694562|ref|YP_008797616.1|	-	0.0029	17.9	3.7	0.005	17.1	0.2	2.2	2	0	0	2	2	2	1	Ead/Ea22-like	protein
TMF_DNA_bd	PF12329.3	gi|557694562|ref|YP_008797616.1|	-	0.0032	17.2	17.1	0.088	12.6	5.3	3.5	1	1	2	3	3	3	2	TATA	element	modulatory	factor	1	DNA	binding
Fib_alpha	PF08702.5	gi|557694562|ref|YP_008797616.1|	-	0.0037	17.4	16.9	0.19	11.8	2.7	2.3	1	1	1	2	2	2	2	Fibrinogen	alpha/beta	chain	family
Tropomyosin	PF00261.15	gi|557694562|ref|YP_008797616.1|	-	0.0037	16.3	13.1	0.014	14.5	4.8	2.5	1	1	1	2	2	2	1	Tropomyosin
Filament	PF00038.16	gi|557694562|ref|YP_008797616.1|	-	0.0041	16.6	21.3	0.027	13.9	6.8	2.5	1	1	1	2	2	2	1	Intermediate	filament	protein
Prefoldin_2	PF01920.15	gi|557694562|ref|YP_008797616.1|	-	0.0041	16.8	20.1	0.39	10.4	0.6	4.2	1	1	4	5	5	5	2	Prefoldin	subunit
AAA_27	PF13514.1	gi|557694562|ref|YP_008797616.1|	-	0.0042	14.8	15.2	0.014	13.1	10.5	1.7	1	1	0	1	1	1	1	AAA	domain
Laminin_I	PF06008.9	gi|557694562|ref|YP_008797616.1|	-	0.0047	16.2	19.4	0.011	15.0	13.5	1.5	1	1	0	1	1	1	1	Laminin	Domain	I
Nup54	PF13874.1	gi|557694562|ref|YP_008797616.1|	-	0.0049	16.5	6.3	0.0049	16.5	4.3	3.0	1	1	2	3	3	3	1	Nucleoporin	complex	subunit	54
DUF3584	PF12128.3	gi|557694562|ref|YP_008797616.1|	-	0.007	13.7	13.7	0.0092	13.3	9.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
BLOC1_2	PF10046.4	gi|557694562|ref|YP_008797616.1|	-	0.0071	16.4	16.5	0.094	12.8	1.8	3.4	1	1	2	3	3	3	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Spore_III_AB	PF09548.5	gi|557694562|ref|YP_008797616.1|	-	0.0085	15.8	11.8	0.011	15.5	6.1	2.1	1	1	1	2	2	1	1	Stage	III	sporulation	protein	AB	(spore_III_AB)
DUF724	PF05266.9	gi|557694562|ref|YP_008797616.1|	-	0.011	15.3	9.2	0.015	14.8	5.8	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
Atg14	PF10186.4	gi|557694562|ref|YP_008797616.1|	-	0.012	14.6	19.4	0.055	12.4	6.5	2.2	1	1	1	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Cast	PF10174.4	gi|557694562|ref|YP_008797616.1|	-	0.014	13.5	18.1	0.027	12.5	12.6	1.4	1	1	0	1	1	1	0	RIM-binding	protein	of	the	cytomatrix	active	zone
CENP-Q	PF13094.1	gi|557694562|ref|YP_008797616.1|	-	0.017	15.1	25.3	0.1	12.5	8.1	2.8	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DUF3450	PF11932.3	gi|557694562|ref|YP_008797616.1|	-	0.018	14.3	19.1	0.18	11.0	6.5	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
FH2	PF02181.18	gi|557694562|ref|YP_008797616.1|	-	0.019	13.8	5.7	0.12	11.2	1.0	2.1	1	1	1	2	2	2	0	Formin	Homology	2	Domain
CALCOCO1	PF07888.6	gi|557694562|ref|YP_008797616.1|	-	0.02	13.2	15.1	0.04	12.2	10.4	1.5	1	1	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
PhoU_div	PF01865.11	gi|557694562|ref|YP_008797616.1|	-	0.031	13.4	0.6	4.3	6.4	0.2	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF47
HALZ	PF02183.13	gi|557694562|ref|YP_008797616.1|	-	0.032	13.9	11.7	0.18	11.5	1.3	3.9	2	1	2	4	4	4	0	Homeobox	associated	leucine	zipper
DUF342	PF03961.8	gi|557694562|ref|YP_008797616.1|	-	0.035	12.5	14.3	0.087	11.2	4.8	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF342)
Perilipin	PF03036.11	gi|557694562|ref|YP_008797616.1|	-	0.039	12.7	10.9	0.058	12.2	7.6	1.1	1	0	0	1	1	1	0	Perilipin	family
DUF972	PF06156.8	gi|557694562|ref|YP_008797616.1|	-	0.045	14.1	16.8	1.4	9.3	5.0	3.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF972)
Cep57_MT_bd	PF06657.8	gi|557694562|ref|YP_008797616.1|	-	0.051	13.5	15.8	0.052	13.4	2.2	3.9	1	1	3	4	4	4	0	Centrosome	microtubule-binding	domain	of	Cep57
bZIP_1	PF00170.16	gi|557694562|ref|YP_008797616.1|	-	0.051	13.5	16.3	1.4	8.8	0.7	4.0	2	1	3	5	5	4	0	bZIP	transcription	factor
Mnd1	PF03962.10	gi|557694562|ref|YP_008797616.1|	-	0.06	13.0	14.7	0.11	12.1	5.0	2.5	1	1	2	3	3	3	0	Mnd1	family
DUF4041	PF13250.1	gi|557694562|ref|YP_008797616.1|	-	0.063	12.8	1.7	2	8.0	0.0	3.5	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4041)
Mod_r	PF07200.8	gi|557694562|ref|YP_008797616.1|	-	0.072	13.0	16.0	0.77	9.6	4.1	2.5	1	1	1	2	2	2	0	Modifier	of	rudimentary	(Mod(r))	protein
Sec8_exocyst	PF04048.9	gi|557694562|ref|YP_008797616.1|	-	0.075	12.6	11.4	0.15	11.6	1.2	2.5	1	1	1	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
LOH1CR12	PF10158.4	gi|557694562|ref|YP_008797616.1|	-	0.076	12.8	6.2	0.13	12.1	2.0	2.4	1	1	1	2	2	2	0	Tumour	suppressor	protein
Syntaxin_2	PF14523.1	gi|557694562|ref|YP_008797616.1|	-	0.08	12.9	13.1	0.56	10.2	8.2	2.4	1	1	0	1	1	1	0	Syntaxin-like	protein
Myosin_tail_1	PF01576.14	gi|557694562|ref|YP_008797616.1|	-	0.098	10.3	17.5	0.23	9.1	5.4	2.0	1	1	0	1	1	1	0	Myosin	tail
Vps5	PF09325.5	gi|557694562|ref|YP_008797616.1|	-	0.12	11.6	12.6	0.16	11.1	1.0	2.4	1	1	1	2	2	2	0	Vps5	C	terminal	like
IFT57	PF10498.4	gi|557694562|ref|YP_008797616.1|	-	0.14	10.9	17.5	1.1	7.9	4.8	2.2	1	1	1	2	2	2	0	Intra-flagellar	transport	protein	57
DUF2730	PF10805.3	gi|557694562|ref|YP_008797616.1|	-	0.14	11.9	7.7	0.52	10.0	3.2	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2730)
FUSC	PF04632.7	gi|557694562|ref|YP_008797616.1|	-	0.15	10.4	9.0	0.21	9.9	6.2	1.2	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
V_ATPase_I	PF01496.14	gi|557694562|ref|YP_008797616.1|	-	0.16	9.7	9.3	0.33	8.7	6.4	1.5	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Baculo_PEP_C	PF04513.7	gi|557694562|ref|YP_008797616.1|	-	0.18	11.6	14.5	0.52	10.1	6.2	2.3	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
UPF0242	PF06785.6	gi|557694562|ref|YP_008797616.1|	-	0.18	10.4	10.3	0.32	9.6	7.2	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)
DivIVA	PF05103.8	gi|557694562|ref|YP_008797616.1|	-	0.18	11.8	16.7	2.7	8.0	0.3	3.0	1	1	2	3	3	3	0	DivIVA	protein
Peripla_BP_2	PF01497.13	gi|557694562|ref|YP_008797616.1|	-	0.19	10.8	1.0	0.3	10.1	0.7	1.3	1	0	0	1	1	1	0	Periplasmic	binding	protein
TMF_TATA_bd	PF12325.3	gi|557694562|ref|YP_008797616.1|	-	0.19	11.4	20.3	0.56	9.9	6.0	2.7	1	1	2	3	3	3	0	TATA	element	modulatory	factor	1	TATA	binding
Sec34	PF04136.10	gi|557694562|ref|YP_008797616.1|	-	0.23	11.1	9.3	0.24	11.0	2.2	2.6	1	1	1	2	2	2	0	Sec34-like	family
Seryl_tRNA_N	PF02403.17	gi|557694562|ref|YP_008797616.1|	-	0.26	11.3	11.2	1.1	9.2	4.2	2.6	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
DASH_Spc34	PF08657.5	gi|557694562|ref|YP_008797616.1|	-	0.27	10.8	17.9	1.7	8.2	2.5	2.6	1	1	1	2	2	2	0	DASH	complex	subunit	Spc34
RmuC	PF02646.11	gi|557694562|ref|YP_008797616.1|	-	0.31	9.8	11.8	0.99	8.1	3.1	2.2	2	0	0	2	2	2	0	RmuC	family
Jnk-SapK_ap_N	PF09744.4	gi|557694562|ref|YP_008797616.1|	-	0.32	10.9	16.3	0.14	12.0	4.0	2.6	1	1	1	2	2	2	0	JNK_SAPK-associated	protein-1
DUF1664	PF07889.7	gi|557694562|ref|YP_008797616.1|	-	0.35	10.6	10.3	7.2	6.4	0.2	3.6	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF1664)
ERM	PF00769.14	gi|557694562|ref|YP_008797616.1|	-	0.36	10.3	15.6	0.76	9.2	10.6	1.5	1	1	0	1	1	1	0	Ezrin/radixin/moesin	family
Rab5-bind	PF09311.6	gi|557694562|ref|YP_008797616.1|	-	0.42	10.4	20.2	0.75	9.6	9.4	3.1	1	1	1	2	2	2	0	Rabaptin-like	protein
Syntaxin-6_N	PF09177.6	gi|557694562|ref|YP_008797616.1|	-	0.55	10.6	12.9	0.93	9.9	0.5	3.4	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
Cluap1	PF10234.4	gi|557694562|ref|YP_008797616.1|	-	0.65	9.1	16.9	0.58	9.3	10.4	1.7	1	1	1	2	2	2	0	Clusterin-associated	protein-1
Prefoldin	PF02996.12	gi|557694562|ref|YP_008797616.1|	-	0.66	9.6	17.5	2.1	8.0	0.3	3.9	2	1	1	4	4	4	0	Prefoldin	subunit
CENP-F_N	PF10481.4	gi|557694562|ref|YP_008797616.1|	-	0.67	9.2	10.6	1.4	8.2	5.1	2.4	1	1	2	3	3	3	0	Cenp-F	N-terminal	domain
FlxA	PF14282.1	gi|557694562|ref|YP_008797616.1|	-	0.87	9.5	16.1	2.7	7.9	0.3	3.2	1	1	2	3	3	3	0	FlxA-like	protein
Occludin_ELL	PF07303.8	gi|557694562|ref|YP_008797616.1|	-	0.88	10.3	14.4	3.2	8.5	4.0	3.4	1	1	3	4	4	4	0	Occludin	homology	domain
CCDC155	PF14662.1	gi|557694562|ref|YP_008797616.1|	-	0.89	9.1	19.9	2.3	7.7	13.8	1.6	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155
Spc24	PF08286.6	gi|557694562|ref|YP_008797616.1|	-	1	9.0	16.1	3.1	7.4	1.9	3.7	1	1	2	3	3	3	0	Spc24	subunit	of	Ndc80
Lebercilin	PF15619.1	gi|557694562|ref|YP_008797616.1|	-	1	8.7	21.8	21	4.4	14.9	2.2	1	1	0	1	1	1	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
DUF4140	PF13600.1	gi|557694562|ref|YP_008797616.1|	-	1.1	9.7	15.1	4	7.9	1.1	4.1	1	1	3	4	4	4	0	N-terminal	domain	of	unknown	function	(DUF4140)
GrpE	PF01025.14	gi|557694562|ref|YP_008797616.1|	-	1.1	8.7	14.1	4.9	6.6	0.2	3.4	1	1	3	4	4	3	0	GrpE
NPV_P10	PF05531.7	gi|557694562|ref|YP_008797616.1|	-	1.2	9.4	5.3	6.9	7.0	1.4	3.2	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Sipho_Gp157	PF05565.6	gi|557694562|ref|YP_008797616.1|	-	1.4	8.4	7.6	5.9	6.4	3.3	2.7	1	1	1	2	2	2	0	Siphovirus	Gp157
FlaC_arch	PF05377.6	gi|557694562|ref|YP_008797616.1|	-	1.5	8.7	9.7	35	4.4	0.6	4.2	1	1	3	4	4	3	0	Flagella	accessory	protein	C	(FlaC)
IL11	PF07400.6	gi|557694562|ref|YP_008797616.1|	-	1.5	8.3	5.5	0.19	11.2	0.6	1.9	3	0	0	3	3	1	0	Interleukin	11
Laminin_II	PF06009.7	gi|557694562|ref|YP_008797616.1|	-	1.7	8.3	10.2	1.6	8.4	3.5	2.2	1	1	1	2	2	2	0	Laminin	Domain	II
Phage_Mu_Gam	PF07352.7	gi|557694562|ref|YP_008797616.1|	-	2	7.8	8.1	2.2	7.8	4.5	1.7	1	1	1	2	2	2	0	Bacteriophage	Mu	Gam	like	protein
WXG100	PF06013.7	gi|557694562|ref|YP_008797616.1|	-	2.5	8.1	9.2	5.8	6.9	1.5	3.3	1	1	4	5	5	5	0	Proteins	of	100	residues	with	WXG
HrpB7	PF09486.5	gi|557694562|ref|YP_008797616.1|	-	2.7	7.9	13.0	9.1	6.1	0.8	2.9	1	1	1	2	2	2	0	Bacterial	type	III	secretion	protein	(HrpB7)
Cep57_CLD_2	PF14197.1	gi|557694562|ref|YP_008797616.1|	-	3.3	7.7	24.5	4.7	7.2	5.8	3.2	2	1	1	3	3	3	0	Centrosome	localisation	domain	of	PPC89
FliD_N	PF02465.13	gi|557694562|ref|YP_008797616.1|	-	3.4	8.0	11.2	9	6.7	2.1	3.4	1	1	2	3	3	3	0	Flagellar	hook-associated	protein	2	N-terminus
PEP-utilisers_N	PF05524.8	gi|557694562|ref|YP_008797616.1|	-	3.7	7.3	8.5	3.6	7.4	0.7	2.8	1	1	2	3	3	2	0	PEP-utilising	enzyme,	N-terminal
Matrilin_ccoil	PF10393.4	gi|557694562|ref|YP_008797616.1|	-	3.9	6.9	5.9	8.7	5.8	0.2	3.1	3	0	0	3	3	2	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
Lzipper-MIP1	PF14389.1	gi|557694562|ref|YP_008797616.1|	-	3.9	7.6	12.8	1.7	8.8	2.1	3.8	2	2	1	3	3	3	0	Leucine-zipper	of	ternary	complex	factor	MIP1
DUF4407	PF14362.1	gi|557694562|ref|YP_008797616.1|	-	4	6.3	13.0	9.8	5.0	4.4	3.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
EMP24_GP25L	PF01105.19	gi|557694562|ref|YP_008797616.1|	-	4.1	7.0	18.1	2.2	7.9	3.7	3.6	2	1	2	4	4	3	0	emp24/gp25L/p24	family/GOLD
FadA	PF09403.5	gi|557694562|ref|YP_008797616.1|	-	4.3	7.3	12.1	0.87	9.6	1.3	3.4	1	1	2	3	3	2	0	Adhesion	protein	FadA
DUF4337	PF14235.1	gi|557694562|ref|YP_008797616.1|	-	4.4	7.1	11.3	6.5	6.5	1.1	3.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4337)
Phage_GP20	PF06810.6	gi|557694562|ref|YP_008797616.1|	-	4.4	6.7	11.1	17	4.8	1.2	3.0	1	1	2	3	3	3	0	Phage	minor	structural	protein	GP20
Syntaxin	PF00804.20	gi|557694562|ref|YP_008797616.1|	-	4.5	7.4	12.5	9.9	6.3	0.3	2.7	1	1	1	2	2	2	0	Syntaxin
DUF1192	PF06698.6	gi|557694562|ref|YP_008797616.1|	-	4.8	7.0	8.8	8.6	6.2	0.9	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1192)
DUF2203	PF09969.4	gi|557694562|ref|YP_008797616.1|	-	4.8	7.4	8.5	1.3e+02	2.8	5.9	2.5	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
BRE1	PF08647.6	gi|557694562|ref|YP_008797616.1|	-	4.9	7.1	11.6	5.4	7.0	2.2	2.3	1	1	1	2	2	2	0	BRE1	E3	ubiquitin	ligase
Exonuc_VII_L	PF02601.10	gi|557694562|ref|YP_008797616.1|	-	5.7	6.0	18.7	24	4.0	13.0	1.8	1	1	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF607	PF04678.8	gi|557694562|ref|YP_008797616.1|	-	5.7	6.8	10.6	4.4	7.1	2.4	2.6	1	1	2	3	3	2	0	Protein	of	unknown	function,	DUF607
Sec5	PF15469.1	gi|557694562|ref|YP_008797616.1|	-	6.1	6.5	9.7	2.6	7.7	2.3	2.2	1	1	0	2	2	2	0	Exocyst	complex	component	Sec5
Snapin_Pallidin	PF14712.1	gi|557694562|ref|YP_008797616.1|	-	6.3	7.1	16.2	0.27	11.5	4.9	2.6	2	1	0	2	2	2	0	Snapin/Pallidin
OmpH	PF03938.9	gi|557694562|ref|YP_008797616.1|	-	7.1	6.5	13.5	35	4.3	9.3	2.0	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DUF848	PF05852.6	gi|557694562|ref|YP_008797616.1|	-	7.5	6.3	11.4	6.4	6.6	3.8	2.5	1	1	0	2	2	2	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
CENP-H	PF05837.7	gi|557694562|ref|YP_008797616.1|	-	8.3	6.6	12.3	0.27	11.4	2.0	2.6	1	1	2	3	3	3	0	Centromere	protein	H	(CENP-H)
Rho_Binding	PF08912.6	gi|557694562|ref|YP_008797616.1|	-	8.5	6.7	14.0	3	8.2	0.7	3.4	1	1	3	4	4	3	0	Rho	Binding
Acetyltransf_11	PF13720.1	gi|557694562|ref|YP_008797616.1|	-	9	6.6	6.7	12	6.2	0.2	3.2	1	1	2	3	3	2	0	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
DUF2968	PF11180.3	gi|557694562|ref|YP_008797616.1|	-	9.2	5.5	19.4	23	4.2	6.6	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2968)
XhlA	PF10779.4	gi|557694562|ref|YP_008797616.1|	-	9.4	6.2	8.0	2.1e+02	1.9	0.0	2.9	2	1	0	2	2	2	0	Haemolysin	XhlA
ThiF	PF00899.16	gi|557694563|ref|YP_008797617.1|	-	6.4e-47	158.7	0.0	1e-46	158.1	0.0	1.3	1	0	0	1	1	1	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|557694563|ref|YP_008797617.1|	-	2.6e-34	116.6	0.0	5.1e-34	115.7	0.0	1.5	1	0	0	1	1	1	1	MoeZ/MoeB	domain
Rhodanese	PF00581.15	gi|557694563|ref|YP_008797617.1|	-	9.6e-21	74.2	0.0	1.8e-20	73.3	0.0	1.5	1	0	0	1	1	1	1	Rhodanese-like	domain
Shikimate_DH	PF01488.15	gi|557694563|ref|YP_008797617.1|	-	0.0021	18.1	1.6	0.076	13.1	0.3	2.8	2	1	0	3	3	3	1	Shikimate	/	quinate	5-dehydrogenase
Ldh_1_N	PF00056.18	gi|557694563|ref|YP_008797617.1|	-	0.041	13.7	0.9	0.092	12.5	0.6	1.7	1	1	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|557694563|ref|YP_008797617.1|	-	0.17	11.5	0.0	0.35	10.5	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ABC_tran	PF00005.22	gi|557694564|ref|YP_008797618.1|	-	1.3e-31	109.7	0.0	1.7e-31	109.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694564|ref|YP_008797618.1|	-	7.4e-11	42.5	0.0	3.9e-05	23.7	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694564|ref|YP_008797618.1|	-	1.3e-07	31.0	0.1	0.00045	19.5	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|557694564|ref|YP_008797618.1|	-	1.9e-05	24.7	0.6	8.8e-05	22.5	0.4	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557694564|ref|YP_008797618.1|	-	5.9e-05	23.2	0.4	0.00036	20.6	0.3	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|557694564|ref|YP_008797618.1|	-	0.00024	21.8	0.3	0.00035	21.3	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557694564|ref|YP_008797618.1|	-	0.00081	19.0	0.9	0.0049	16.6	0.0	2.3	3	0	0	3	3	2	1	Part	of	AAA	domain
AAA_18	PF13238.1	gi|557694564|ref|YP_008797618.1|	-	0.00098	19.4	0.3	0.0036	17.5	0.0	1.9	1	1	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|557694564|ref|YP_008797618.1|	-	0.0011	18.4	0.0	0.0023	17.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|557694564|ref|YP_008797618.1|	-	0.0012	19.2	0.4	0.004	17.5	0.3	1.9	1	1	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|557694564|ref|YP_008797618.1|	-	0.0012	18.6	0.0	0.013	15.3	0.0	2.2	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_13	PF13166.1	gi|557694564|ref|YP_008797618.1|	-	0.0031	16.0	0.0	0.036	12.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|557694564|ref|YP_008797618.1|	-	0.0041	16.8	0.1	0.0099	15.5	0.0	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
NTPase_1	PF03266.10	gi|557694564|ref|YP_008797618.1|	-	0.0042	16.8	0.3	0.98	9.1	0.0	2.2	2	0	0	2	2	2	1	NTPase
DUF258	PF03193.11	gi|557694564|ref|YP_008797618.1|	-	0.0042	16.2	0.0	0.0069	15.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_33	PF13671.1	gi|557694564|ref|YP_008797618.1|	-	0.0043	16.9	0.6	0.01	15.7	0.4	2.0	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|557694564|ref|YP_008797618.1|	-	0.0051	16.2	0.2	1.7	7.9	0.0	2.6	3	1	0	3	3	2	1	IstB-like	ATP	binding	protein
AAA_10	PF12846.2	gi|557694564|ref|YP_008797618.1|	-	0.006	16.0	0.6	0.0079	15.6	0.4	1.5	1	1	0	1	1	1	1	AAA-like	domain
MobB	PF03205.9	gi|557694564|ref|YP_008797618.1|	-	0.0074	15.9	0.1	0.015	14.9	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|557694564|ref|YP_008797618.1|	-	0.0082	15.7	0.1	0.077	12.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
MMR_HSR1	PF01926.18	gi|557694564|ref|YP_008797618.1|	-	0.0084	16.0	0.1	0.39	10.6	0.0	2.3	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_25	PF13481.1	gi|557694564|ref|YP_008797618.1|	-	0.015	14.7	0.0	0.057	12.8	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|557694564|ref|YP_008797618.1|	-	0.016	14.8	0.1	0.042	13.5	0.0	1.8	2	0	0	2	2	2	0	NACHT	domain
PhoH	PF02562.11	gi|557694564|ref|YP_008797618.1|	-	0.024	13.8	0.0	0.049	12.8	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
cobW	PF02492.14	gi|557694564|ref|YP_008797618.1|	-	0.032	13.6	0.3	0.07	12.5	0.1	1.6	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
T2SE	PF00437.15	gi|557694564|ref|YP_008797618.1|	-	0.037	12.9	0.0	0.085	11.7	0.0	1.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
NB-ARC	PF00931.17	gi|557694564|ref|YP_008797618.1|	-	0.04	12.7	0.0	0.085	11.6	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
AAA_28	PF13521.1	gi|557694564|ref|YP_008797618.1|	-	0.048	13.6	0.0	0.12	12.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
SRPRB	PF09439.5	gi|557694564|ref|YP_008797618.1|	-	0.059	12.5	0.0	0.74	8.9	0.0	2.2	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
AAA_14	PF13173.1	gi|557694564|ref|YP_008797618.1|	-	0.066	13.1	0.0	0.12	12.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|557694564|ref|YP_008797618.1|	-	0.091	12.2	0.1	0.62	9.5	0.0	2.0	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Zeta_toxin	PF06414.7	gi|557694564|ref|YP_008797618.1|	-	0.11	11.6	0.0	0.19	10.7	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_24	PF13479.1	gi|557694564|ref|YP_008797618.1|	-	0.11	12.0	0.1	0.28	10.7	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
CARDB	PF07705.6	gi|557694565|ref|YP_008797619.1|	-	1.8e-13	50.3	17.0	0.00073	19.5	0.2	5.5	4	2	2	6	6	6	4	CARDB
NPCBM_assoc	PF10633.4	gi|557694565|ref|YP_008797619.1|	-	5.5e-11	42.3	9.8	0.1	12.6	0.3	6.4	5	2	0	5	5	5	4	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
TRAP_beta	PF05753.9	gi|557694565|ref|YP_008797619.1|	-	4.7e-07	29.1	6.0	0.0082	15.3	0.1	4.2	4	0	0	4	4	4	3	Translocon-associated	protein	beta	(TRAPB)
FixG_C	PF11614.3	gi|557694565|ref|YP_008797619.1|	-	3.7e-05	23.8	1.5	0.39	10.8	0.0	4.8	4	2	1	5	5	5	1	IG-like	fold	at	C-terminal	of	FixG,	putative	oxidoreductase
PHTB1_C	PF14728.1	gi|557694565|ref|YP_008797619.1|	-	0.0016	17.3	0.2	0.13	11.0	0.0	2.2	2	0	0	2	2	2	1	PTHB1	C-terminus
DUF11	PF01345.13	gi|557694565|ref|YP_008797619.1|	-	0.016	15.2	0.1	0.016	15.2	0.1	5.3	5	0	0	5	5	5	0	Domain	of	unknown	function	DUF11
DUF3869	PF12985.2	gi|557694565|ref|YP_008797619.1|	-	0.021	15.2	1.2	1.4	9.3	0.0	3.5	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF3869)
Transglut_C	PF00927.17	gi|557694565|ref|YP_008797619.1|	-	0.025	14.6	5.1	26	4.9	0.0	5.3	5	1	1	6	6	6	0	Transglutaminase	family,	C-terminal	ig	like	domain
TRAP_alpha	PF03896.11	gi|557694565|ref|YP_008797619.1|	-	0.089	11.7	0.0	11	4.9	0.0	2.6	2	0	0	2	2	2	0	Translocon-associated	protein	(TRAP),	alpha	subunit
Dynactin_p62	PF05502.8	gi|557694565|ref|YP_008797619.1|	-	0.099	11.3	0.1	0.14	10.8	0.1	1.2	1	0	0	1	1	1	0	Dynactin	p62	family
DUF2790	PF10976.3	gi|557694565|ref|YP_008797619.1|	-	0.14	11.9	0.1	6.2	6.6	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2790)
FtsX	PF02687.16	gi|557694566|ref|YP_008797620.1|	-	3e-24	85.0	7.5	3e-24	85.0	5.2	2.4	2	0	0	2	2	2	1	FtsX-like	permease	family
MacB_PCD	PF12704.2	gi|557694566|ref|YP_008797620.1|	-	7.6e-24	84.5	2.2	7.6e-24	84.5	1.5	2.9	3	0	0	3	3	3	1	MacB-like	periplasmic	core	domain
DUF1743	PF08489.6	gi|557694567|ref|YP_008797621.1|	-	1e-29	102.6	0.0	4e-27	94.2	0.0	2.2	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.20	gi|557694567|ref|YP_008797621.1|	-	3e-11	43.0	1.5	5.7e-11	42.1	1.0	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DZR	PF12773.2	gi|557694567|ref|YP_008797621.1|	-	0.0039	16.9	0.4	0.0081	15.9	0.3	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
tRNA_anti_2	PF13742.1	gi|557694567|ref|YP_008797621.1|	-	0.0039	17.0	0.0	0.0069	16.2	0.0	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|557694567|ref|YP_008797621.1|	-	0.058	13.2	2.7	0.17	11.7	1.9	1.8	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|557694567|ref|YP_008797621.1|	-	0.08	12.6	1.5	0.17	11.5	1.0	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Zn-ribbon_8	PF09723.5	gi|557694567|ref|YP_008797621.1|	-	0.095	12.6	1.0	9.6	6.2	0.0	3.0	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|557694567|ref|YP_008797621.1|	-	0.1	12.2	4.4	3.3	7.4	3.1	2.5	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_2	PF13240.1	gi|557694567|ref|YP_008797621.1|	-	0.11	12.0	5.7	1.5	8.4	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
C1_1	PF00130.17	gi|557694567|ref|YP_008797621.1|	-	0.15	11.8	0.2	0.25	11.0	0.1	1.3	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-NADH-PPase	PF09297.6	gi|557694567|ref|YP_008797621.1|	-	0.28	10.7	7.2	2.6	7.6	5.3	2.4	2	1	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|557694567|ref|YP_008797621.1|	-	0.62	10.1	4.0	4.7	7.3	0.6	2.5	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
ACT	PF01842.20	gi|557694568|ref|YP_008797622.1|	-	1.1e-08	34.3	0.0	2.2e-08	33.4	0.0	1.5	1	0	0	1	1	1	1	ACT	domain
V4R	PF02830.13	gi|557694568|ref|YP_008797622.1|	-	1e-06	28.4	0.2	2e-06	27.5	0.1	1.4	1	0	0	1	1	1	1	V4R	domain
ACT_4	PF13291.1	gi|557694568|ref|YP_008797622.1|	-	0.00045	20.4	0.5	0.0017	18.6	0.4	1.9	1	1	0	1	1	1	1	ACT	domain
PhoU	PF01895.14	gi|557694569|ref|YP_008797623.1|	-	1.7e-12	47.6	5.2	1.6e-07	31.6	1.0	2.5	2	0	0	2	2	2	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|557694569|ref|YP_008797623.1|	-	1.5e-05	24.6	0.1	4.4e-05	23.1	0.1	1.8	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
Apolipoprotein	PF01442.13	gi|557694569|ref|YP_008797623.1|	-	0.039	13.4	1.3	0.063	12.7	0.7	1.5	1	1	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
ICL	PF00463.16	gi|557694570|ref|YP_008797624.1|	-	2.7e-132	441.6	0.2	8.4e-74	248.6	0.0	2.0	1	1	1	2	2	2	2	Isocitrate	lyase	family
PEP_mutase	PF13714.1	gi|557694570|ref|YP_008797624.1|	-	9.5e-18	64.2	0.0	1.9e-17	63.3	0.0	1.4	1	1	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
Malate_synthase	PF01274.17	gi|557694571|ref|YP_008797625.1|	-	5.5e-175	582.3	0.0	6.7e-175	582.0	0.0	1.0	1	0	0	1	1	1	1	Malate	synthase
HpcH_HpaI	PF03328.9	gi|557694571|ref|YP_008797625.1|	-	0.00076	18.4	0.0	0.014	14.2	0.0	2.3	2	1	0	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
UPF0020	PF01170.13	gi|557694572|ref|YP_008797626.1|	-	6.8e-29	100.7	0.0	9.4e-29	100.2	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
THUMP	PF02926.12	gi|557694572|ref|YP_008797626.1|	-	5.8e-20	71.6	0.2	1.1e-19	70.7	0.1	1.4	1	0	0	1	1	1	1	THUMP	domain
Methyltransf_26	PF13659.1	gi|557694572|ref|YP_008797626.1|	-	8.3e-15	54.8	0.0	1.6e-14	53.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|557694572|ref|YP_008797626.1|	-	1.7e-07	30.9	0.0	4.7e-06	26.2	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557694572|ref|YP_008797626.1|	-	1e-05	26.0	0.0	3.4e-05	24.3	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|557694572|ref|YP_008797626.1|	-	0.00016	21.0	0.0	0.00025	20.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_15	PF09445.5	gi|557694572|ref|YP_008797626.1|	-	0.00061	19.3	0.0	0.0028	17.2	0.0	2.0	3	0	0	3	3	3	1	RNA	cap	guanine-N2	methyltransferase
Alpha_kinase	PF02816.13	gi|557694573|ref|YP_008797627.1|	-	0.047	13.3	0.0	0.075	12.6	0.0	1.2	1	0	0	1	1	1	0	Alpha-kinase	family
PIG-U	PF06728.8	gi|557694573|ref|YP_008797627.1|	-	0.061	12.1	6.4	0.089	11.6	4.4	1.2	1	0	0	1	1	1	0	GPI	transamidase	subunit	PIG-U
MFS_1	PF07690.11	gi|557694573|ref|YP_008797627.1|	-	0.09	11.4	12.4	0.26	9.9	8.6	1.8	1	1	0	1	1	1	0	Major	Facilitator	Superfamily
Acyl_transf_3	PF01757.17	gi|557694573|ref|YP_008797627.1|	-	0.26	10.0	12.7	0.39	9.5	8.8	1.2	1	0	0	1	1	1	0	Acyltransferase	family
MARVEL	PF01284.18	gi|557694573|ref|YP_008797627.1|	-	0.34	10.7	6.0	1	9.1	4.2	1.8	1	1	0	1	1	1	0	Membrane-associating	domain
DUF1212	PF06738.7	gi|557694573|ref|YP_008797627.1|	-	0.51	9.7	7.0	1.6	8.1	0.3	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1212)
DUF202	PF02656.10	gi|557694573|ref|YP_008797627.1|	-	2.4	8.4	5.3	7.1	6.9	0.2	2.7	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
MarR	PF01047.17	gi|557694574|ref|YP_008797628.1|	-	1.2e-05	24.8	0.2	0.0003	20.4	0.0	2.4	2	0	0	2	2	2	1	MarR	family
MarR_2	PF12802.2	gi|557694574|ref|YP_008797628.1|	-	9.2e-05	22.0	0.1	0.00023	20.7	0.1	1.7	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|557694574|ref|YP_008797628.1|	-	0.00073	19.2	0.9	0.0014	18.4	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|557694574|ref|YP_008797628.1|	-	0.00099	18.7	0.0	0.0017	17.9	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|557694574|ref|YP_008797628.1|	-	0.0044	17.3	0.1	0.012	15.8	0.1	1.8	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|557694574|ref|YP_008797628.1|	-	0.006	16.3	0.5	0.016	14.9	0.0	1.9	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
Rrf2	PF02082.15	gi|557694574|ref|YP_008797628.1|	-	0.0094	16.0	0.1	0.022	14.8	0.1	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_IclR	PF09339.5	gi|557694574|ref|YP_008797628.1|	-	0.011	15.3	0.2	0.029	13.9	0.1	1.8	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_45	PF14947.1	gi|557694574|ref|YP_008797628.1|	-	0.011	15.5	0.0	0.027	14.2	0.0	1.6	2	0	0	2	2	2	0	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|557694574|ref|YP_008797628.1|	-	0.019	14.9	0.1	0.19	11.7	0.0	2.1	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|557694574|ref|YP_008797628.1|	-	0.021	14.4	0.4	0.11	12.1	0.0	2.2	2	1	1	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
SWIRM	PF04433.12	gi|557694574|ref|YP_008797628.1|	-	0.032	14.3	0.0	0.056	13.5	0.0	1.4	1	0	0	1	1	1	0	SWIRM	domain
HxlR	PF01638.12	gi|557694574|ref|YP_008797628.1|	-	0.04	13.5	0.0	0.073	12.7	0.0	1.5	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_1	PF00126.22	gi|557694574|ref|YP_008797628.1|	-	0.042	13.5	0.1	0.13	11.9	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
z-alpha	PF02295.12	gi|557694574|ref|YP_008797628.1|	-	0.052	13.3	0.0	0.11	12.3	0.0	1.5	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
DUF2250	PF10007.4	gi|557694574|ref|YP_008797628.1|	-	0.072	13.0	0.1	0.2	11.5	0.0	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF1803	PF08820.5	gi|557694574|ref|YP_008797628.1|	-	0.093	12.4	0.0	0.17	11.5	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
PaaX	PF07848.7	gi|557694574|ref|YP_008797628.1|	-	0.21	11.5	1.5	0.62	10.1	0.2	2.1	2	0	0	2	2	2	0	PaaX-like	protein
Proteasome	PF00227.21	gi|557694575|ref|YP_008797629.1|	-	8e-47	158.9	0.1	1e-46	158.6	0.0	1.0	1	0	0	1	1	1	1	Proteasome	subunit
TGF_beta_GS	PF08515.7	gi|557694575|ref|YP_008797629.1|	-	4.8	6.6	5.6	2.7	7.3	2.0	2.0	2	0	0	2	2	2	0	Transforming	growth	factor	beta	type	I	GS-motif
Proteasome	PF00227.21	gi|557694576|ref|YP_008797630.1|	-	1.3e-38	132.1	0.0	1.6e-38	131.8	0.0	1.1	1	0	0	1	1	1	1	Proteasome	subunit
AsnC_trans_reg	PF01037.16	gi|557694577|ref|YP_008797631.1|	-	6e-14	51.4	1.1	6.5e-14	51.3	0.7	1.0	1	0	0	1	1	1	1	AsnC	family
GYD	PF08734.6	gi|557694577|ref|YP_008797631.1|	-	0.02	14.6	0.1	0.025	14.3	0.0	1.2	1	0	0	1	1	1	0	GYD	domain
Meth_synt_2	PF01717.13	gi|557694577|ref|YP_008797631.1|	-	0.055	12.4	0.2	0.059	12.3	0.1	1.0	1	0	0	1	1	1	0	Cobalamin-independent	synthase,	Catalytic	domain
BAF	PF02961.9	gi|557694577|ref|YP_008797631.1|	-	0.087	13.1	0.0	0.097	12.9	0.0	1.1	1	0	0	1	1	1	0	Barrier	to	autointegration	factor
Lactamase_B	PF00753.22	gi|557694578|ref|YP_008797632.1|	-	2.9e-32	111.8	0.8	3.4e-32	111.6	0.6	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|557694578|ref|YP_008797632.1|	-	1.7e-05	24.4	0.1	2.2e-05	24.1	0.0	1.3	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|557694578|ref|YP_008797632.1|	-	0.04	13.6	0.0	0.047	13.3	0.0	1.2	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
Cytochrom_D1	PF02239.11	gi|557694578|ref|YP_008797632.1|	-	0.087	11.0	0.0	0.12	10.6	0.0	1.2	1	0	0	1	1	1	0	Cytochrome	D1	heme	domain
UDG	PF03167.14	gi|557694579|ref|YP_008797633.1|	-	2e-30	105.2	0.0	2.5e-30	104.9	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
MFS_1	PF07690.11	gi|557694580|ref|YP_008797634.1|	-	1.1e-35	123.0	52.5	6.2e-31	107.3	24.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|557694580|ref|YP_008797634.1|	-	0.0015	18.2	4.2	0.18	11.6	0.2	3.1	2	1	0	2	2	2	2	MFS_1	like	family
MFS_3	PF05977.8	gi|557694580|ref|YP_008797634.1|	-	0.0018	16.4	28.0	0.02	13.0	19.4	2.5	1	1	0	1	1	1	1	Transmembrane	secretion	effector
OATP	PF03137.15	gi|557694580|ref|YP_008797634.1|	-	6.5	4.6	9.0	0.86	7.5	0.7	2.7	2	1	1	3	3	3	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
DUF2029	PF09594.5	gi|557694581|ref|YP_008797635.1|	-	5.6e-09	35.8	26.9	5.6e-09	35.8	18.6	2.8	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2029)
PALP	PF00291.20	gi|557694582|ref|YP_008797636.1|	-	1.3e-65	221.6	0.0	1.6e-65	221.3	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
NAD_binding_7	PF13241.1	gi|557694582|ref|YP_008797636.1|	-	0.0051	17.0	0.0	0.034	14.3	0.0	2.1	2	0	0	2	2	2	1	Putative	NAD(P)-binding
MFS_1	PF07690.11	gi|557694583|ref|YP_008797637.1|	-	3.8e-19	68.6	58.7	6.2e-19	67.9	29.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
PhoU	PF01895.14	gi|557694584|ref|YP_008797638.1|	-	4.9e-09	36.5	6.9	9.1e-07	29.2	0.5	2.7	3	0	0	3	3	3	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|557694584|ref|YP_008797638.1|	-	1.8e-05	24.3	0.4	4.9e-05	22.9	0.1	1.8	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
Nitroreductase	PF00881.19	gi|557694585|ref|YP_008797639.1|	-	5.6e-23	81.5	0.0	5.7e-11	42.5	0.0	2.2	2	0	0	2	2	2	2	Nitroreductase	family
ThiI	PF02568.9	gi|557694586|ref|YP_008797640.1|	-	2.2e-53	180.6	0.0	4.3e-53	179.7	0.0	1.4	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
QueC	PF06508.8	gi|557694586|ref|YP_008797640.1|	-	2e-06	27.2	0.1	0.029	13.6	0.0	2.6	3	0	0	3	3	3	2	Queuosine	biosynthesis	protein	QueC
THUMP	PF02926.12	gi|557694586|ref|YP_008797640.1|	-	9.6e-06	25.5	0.3	3.8e-05	23.6	0.1	2.2	2	0	0	2	2	2	1	THUMP	domain
tRNA_Me_trans	PF03054.11	gi|557694586|ref|YP_008797640.1|	-	0.00011	20.9	0.1	0.00039	19.0	0.0	1.9	2	0	0	2	2	2	1	tRNA	methyl	transferase
ATP_bind_3	PF01171.15	gi|557694586|ref|YP_008797640.1|	-	0.024	14.1	0.1	0.79	9.1	0.1	2.4	1	1	0	1	1	1	0	PP-loop	family
Glyco_hydro_cc	PF11790.3	gi|557694586|ref|YP_008797640.1|	-	0.081	12.3	0.0	0.13	11.6	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	catalytic	core
NAD_synthase	PF02540.12	gi|557694586|ref|YP_008797640.1|	-	0.13	11.1	0.2	0.97	8.2	0.2	2.1	1	1	0	1	1	1	0	NAD	synthase
Aldedh	PF00171.17	gi|557694587|ref|YP_008797641.1|	-	4.7e-166	552.6	0.0	5.5e-166	552.4	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|557694587|ref|YP_008797641.1|	-	0.0031	16.3	0.0	0.0045	15.7	0.0	1.1	1	0	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
DUF1487	PF07368.6	gi|557694587|ref|YP_008797641.1|	-	0.0075	15.5	0.0	0.29	10.3	0.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1487)
Methyltransf_23	PF13489.1	gi|557694588|ref|YP_008797642.1|	-	1.2e-08	34.8	0.0	5.9e-08	32.5	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|557694588|ref|YP_008797642.1|	-	6.8e-07	29.6	0.0	9.6e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|557694588|ref|YP_008797642.1|	-	9.2e-05	22.8	0.0	0.00013	22.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|557694588|ref|YP_008797642.1|	-	0.00024	20.8	0.0	0.00028	20.5	0.0	1.1	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_31	PF13847.1	gi|557694588|ref|YP_008797642.1|	-	0.00032	20.2	0.0	0.00061	19.4	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|557694588|ref|YP_008797642.1|	-	0.0053	16.1	0.0	0.0068	15.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.13	gi|557694588|ref|YP_008797642.1|	-	0.01	14.9	0.0	0.018	14.1	0.0	1.5	1	1	1	2	2	2	0	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.1	gi|557694588|ref|YP_008797642.1|	-	0.024	14.9	0.0	0.035	14.4	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
MarC	PF01914.12	gi|557694589|ref|YP_008797643.1|	-	8.3e-39	132.8	14.1	1.1e-38	132.3	9.8	1.2	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
QueT	PF06177.6	gi|557694590|ref|YP_008797644.1|	-	6.4e-11	42.4	8.7	1.3e-10	41.4	6.0	1.5	1	1	0	1	1	1	1	QueT	transporter
DUF2665	PF11654.3	gi|557694590|ref|YP_008797644.1|	-	0.042	13.4	0.5	3.5	7.2	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2665)
AA_permease_C	PF13906.1	gi|557694590|ref|YP_008797644.1|	-	0.062	13.1	0.1	0.062	13.1	0.1	2.7	4	0	0	4	4	4	0	C-terminus	of	AA_permease
COX3	PF00510.13	gi|557694591|ref|YP_008797645.1|	-	4.7e-25	88.4	9.2	6.3e-25	88.0	6.4	1.0	1	0	0	1	1	1	1	Cytochrome	c	oxidase	subunit	III
IF-2B	PF01008.12	gi|557694592|ref|YP_008797646.1|	-	2.2e-29	102.3	0.1	1e-28	100.1	0.0	1.8	1	1	0	1	1	1	1	Initiation	factor	2	subunit	family
ADH_zinc_N	PF00107.21	gi|557694593|ref|YP_008797647.1|	-	1.3e-34	118.5	0.0	2.1e-34	117.8	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|557694593|ref|YP_008797647.1|	-	3.3e-30	104.0	0.1	8.4e-30	102.7	0.0	1.7	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.1	gi|557694593|ref|YP_008797647.1|	-	2.3e-21	76.9	0.0	4.4e-21	76.0	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|557694593|ref|YP_008797647.1|	-	0.00097	18.7	0.2	0.0016	17.9	0.1	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
ACP_syn_III_C	PF08541.5	gi|557694593|ref|YP_008797647.1|	-	0.069	13.1	0.2	0.18	11.8	0.1	1.8	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
CN_hydrolase	PF00795.17	gi|557694594|ref|YP_008797648.1|	-	2.5e-20	72.5	0.0	4.1e-20	71.9	0.0	1.3	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
AP_endonuc_2	PF01261.19	gi|557694595|ref|YP_008797649.1|	-	3.6e-38	130.9	0.0	4.3e-38	130.7	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
DUF761	PF05553.6	gi|557694595|ref|YP_008797649.1|	-	0.14	11.4	0.5	0.25	10.7	0.4	1.4	1	0	0	1	1	1	0	Cotton	fibre	expressed	protein
Glyoxalase_2	PF12681.2	gi|557694596|ref|YP_008797650.1|	-	8.5e-18	64.9	0.0	1e-10	42.1	0.0	2.5	3	0	0	3	3	3	2	Glyoxalase-like	domain
Glyoxalase	PF00903.20	gi|557694596|ref|YP_008797650.1|	-	2.8e-17	62.8	0.0	1.5e-07	31.4	0.0	2.2	2	0	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_4	PF13669.1	gi|557694596|ref|YP_008797650.1|	-	0.026	14.5	0.0	9.5	6.2	0.0	3.3	2	2	0	2	2	2	0	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Peptidase_S24	PF00717.18	gi|557694597|ref|YP_008797651.1|	-	6.6e-10	38.4	0.7	1.1e-09	37.7	0.5	1.4	1	0	0	1	1	1	1	Peptidase	S24-like
CarboxypepD_reg	PF13620.1	gi|557694598|ref|YP_008797652.1|	-	1.1e-37	127.9	59.1	2.3e-07	30.7	2.4	10.3	8	2	2	10	10	10	9	Carboxypeptidase	regulatory-like	domain
DUF4480	PF13715.1	gi|557694598|ref|YP_008797652.1|	-	2.3e-19	69.2	20.0	0.0026	17.7	0.3	8.0	6	2	2	8	8	8	6	Domain	of	unknown	function	(DUF4480)
DUF2012	PF09430.5	gi|557694598|ref|YP_008797652.1|	-	1.1e-10	41.4	2.2	0.15	11.9	0.0	6.2	4	2	2	6	6	6	4	Protein	of	unknown	function	(DUF2012)
Big_1	PF02369.11	gi|557694598|ref|YP_008797652.1|	-	7.3e-09	35.4	23.7	0.0062	16.4	0.0	6.9	6	0	0	6	6	6	3	Bacterial	Ig-like	domain	(group	1)
DUF4198	PF10670.4	gi|557694598|ref|YP_008797652.1|	-	6.5e-08	32.8	8.9	0.0031	17.5	0.0	5.2	5	0	0	5	5	5	2	Domain	of	unknown	function	(DUF4198)
Cna_B	PF05738.8	gi|557694598|ref|YP_008797652.1|	-	0.00013	21.6	21.6	1.1	9.1	0.0	7.5	8	1	1	9	9	9	3	Cna	protein	B-type	domain
Dioxygenase_C	PF00775.16	gi|557694598|ref|YP_008797652.1|	-	0.00046	19.4	1.0	1.3	8.2	0.0	4.1	4	0	0	4	4	4	2	Dioxygenase
DUF824	PF05688.6	gi|557694598|ref|YP_008797652.1|	-	0.001	18.6	13.1	0.26	10.9	0.0	5.6	7	0	0	7	7	7	3	Salmonella	repeat	of	unknown	function	(DUF824)
YtkA	PF13115.1	gi|557694598|ref|YP_008797652.1|	-	0.011	16.0	6.4	4.7	7.6	0.0	5.6	6	0	0	6	6	6	0	YtkA-like
Transcrip_act	PF04949.8	gi|557694599|ref|YP_008797653.1|	-	0.032	13.8	1.5	0.04	13.5	0.2	1.7	2	0	0	2	2	2	0	Transcriptional	activator
Sdh5	PF03937.11	gi|557694599|ref|YP_008797653.1|	-	0.042	13.5	0.3	0.11	12.1	0.1	1.9	2	0	0	2	2	2	0	Flavinator	of	succinate	dehydrogenase
Gag_spuma	PF03276.9	gi|557694599|ref|YP_008797653.1|	-	0.11	10.7	0.1	0.13	10.5	0.1	1.1	1	0	0	1	1	1	0	Spumavirus	gag	protein
IncA	PF04156.9	gi|557694599|ref|YP_008797653.1|	-	0.25	10.8	2.4	0.3	10.6	1.6	1.2	1	0	0	1	1	1	0	IncA	protein
FGGY_N	PF00370.16	gi|557694600|ref|YP_008797654.1|	-	6.7e-32	110.7	0.0	1.4e-30	106.3	0.0	2.4	1	1	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.11	gi|557694600|ref|YP_008797654.1|	-	6.5e-14	52.0	0.1	1.1e-13	51.2	0.1	1.4	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
BcrAD_BadFG	PF01869.15	gi|557694600|ref|YP_008797654.1|	-	0.0021	17.4	0.2	0.073	12.3	0.0	2.2	2	0	0	2	2	2	1	BadF/BadG/BcrA/BcrD	ATPase	family
UPRTase	PF14681.1	gi|557694601|ref|YP_008797655.1|	-	3.7e-53	179.8	0.0	4.2e-53	179.6	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.22	gi|557694601|ref|YP_008797655.1|	-	9.8e-09	35.0	0.2	1.6e-08	34.2	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|557694601|ref|YP_008797655.1|	-	0.022	14.0	0.0	0.075	12.3	0.0	1.8	1	1	0	1	1	1	0	Phosphoribosyl	transferase
FAD_binding_2	PF00890.19	gi|557694602|ref|YP_008797656.1|	-	1.3e-97	327.3	0.0	1.5e-97	327.1	0.0	1.0	1	0	0	1	1	1	1	FAD	binding	domain
DAO	PF01266.19	gi|557694602|ref|YP_008797656.1|	-	1.2e-10	40.8	1.7	1.7e-06	27.1	0.1	3.3	2	1	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|557694602|ref|YP_008797656.1|	-	3.1e-09	36.4	1.0	1.3e-07	31.0	0.3	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|557694602|ref|YP_008797656.1|	-	2e-07	29.8	1.9	3.6e-07	29.0	0.8	1.7	2	0	0	2	2	2	1	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|557694602|ref|YP_008797656.1|	-	5.5e-07	29.5	2.0	9.9e-06	25.5	0.8	2.7	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|557694602|ref|YP_008797656.1|	-	1.1e-05	25.3	0.1	0.00021	21.2	0.1	2.4	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|557694602|ref|YP_008797656.1|	-	0.00026	20.1	0.4	0.00038	19.6	0.3	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Thi4	PF01946.12	gi|557694602|ref|YP_008797656.1|	-	0.0016	17.6	1.8	0.0016	17.6	1.3	2.1	3	0	0	3	3	3	1	Thi4	family
Pyr_redox_3	PF13738.1	gi|557694602|ref|YP_008797656.1|	-	0.0048	16.9	0.1	0.011	15.8	0.1	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|557694602|ref|YP_008797656.1|	-	0.015	14.1	0.6	0.056	12.2	0.5	1.7	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|557694602|ref|YP_008797656.1|	-	0.16	10.8	0.1	0.24	10.2	0.1	1.3	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|557694602|ref|YP_008797656.1|	-	0.25	11.7	2.1	0.73	10.2	1.1	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.19	gi|557694602|ref|YP_008797656.1|	-	0.4	9.7	6.7	1.5	7.8	0.6	3.0	3	0	0	3	3	3	0	Flavin	containing	amine	oxidoreductase
DUF4131	PF13567.1	gi|557694603|ref|YP_008797657.1|	-	0.017	14.5	3.3	0.02	14.3	2.3	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF70	PF01901.11	gi|557694603|ref|YP_008797657.1|	-	0.049	12.6	1.1	0.051	12.6	0.7	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF70
DUF1469	PF07332.6	gi|557694603|ref|YP_008797657.1|	-	0.11	12.2	5.3	0.12	12.1	3.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
ABC2_membrane_3	PF12698.2	gi|557694603|ref|YP_008797657.1|	-	0.11	11.5	5.6	0.13	11.2	3.9	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
RAMP4	PF06624.7	gi|557694603|ref|YP_008797657.1|	-	0.15	11.6	1.9	1.9	8.1	0.1	2.2	2	0	0	2	2	2	0	Ribosome	associated	membrane	protein	RAMP4
DUF4383	PF14325.1	gi|557694603|ref|YP_008797657.1|	-	0.16	11.9	8.7	1.4	8.9	0.9	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4383)
NfeD	PF01957.13	gi|557694603|ref|YP_008797657.1|	-	0.25	11.4	3.2	0.28	11.3	2.2	1.0	1	0	0	1	1	1	0	NfeD-like	C-terminal,	partner-binding
DPM2	PF07297.7	gi|557694603|ref|YP_008797657.1|	-	0.32	11.3	3.4	1.2	9.4	2.4	1.8	1	1	0	1	1	1	0	Dolichol	phosphate-mannose	biosynthesis	regulatory	protein	(DPM2)
PIG-P	PF08510.7	gi|557694603|ref|YP_008797657.1|	-	0.34	10.5	6.4	10	5.7	4.5	2.0	1	1	0	1	1	1	0	PIG-P
Tetraspannin	PF00335.15	gi|557694603|ref|YP_008797657.1|	-	0.35	10.1	3.4	0.42	9.8	2.4	1.1	1	0	0	1	1	1	0	Tetraspanin	family
S1FA	PF04689.8	gi|557694603|ref|YP_008797657.1|	-	0.63	9.9	4.1	1.5	8.7	0.1	2.1	2	0	0	2	2	2	0	DNA	binding	protein	S1FA
DUF1625	PF07787.7	gi|557694603|ref|YP_008797657.1|	-	1	8.5	4.1	1.2	8.3	2.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1625)
DUF2207	PF09972.4	gi|557694603|ref|YP_008797657.1|	-	1	7.8	3.6	1.1	7.7	2.5	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF3951	PF13131.1	gi|557694603|ref|YP_008797657.1|	-	1.5	8.6	10.1	0.18	11.6	1.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3951)
FixQ	PF05545.6	gi|557694603|ref|YP_008797657.1|	-	2.2	7.9	13.0	1.9	8.1	1.8	2.3	2	0	0	2	2	2	0	Cbb3-type	cytochrome	oxidase	component	FixQ
ABC2_membrane_2	PF12679.2	gi|557694603|ref|YP_008797657.1|	-	2.5	6.9	10.1	3.1	6.5	7.0	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
SdpI	PF13630.1	gi|557694603|ref|YP_008797657.1|	-	2.9	7.6	6.4	4.3	7.0	4.4	1.3	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
PspC	PF04024.7	gi|557694603|ref|YP_008797657.1|	-	3.5	7.1	6.4	15	5.1	0.1	2.1	2	0	0	2	2	2	0	PspC	domain
DUF3302	PF11742.3	gi|557694603|ref|YP_008797657.1|	-	5.2	6.9	6.5	6.1	6.7	0.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3302)
DUF4064	PF13273.1	gi|557694603|ref|YP_008797657.1|	-	9.5	6.4	9.6	3.3e+02	1.4	6.7	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
LexA_DNA_bind	PF01726.11	gi|557694604|ref|YP_008797658.1|	-	7.5e-05	22.2	0.0	0.00012	21.5	0.0	1.3	1	0	0	1	1	1	1	LexA	DNA	binding	domain
HTH_IclR	PF09339.5	gi|557694604|ref|YP_008797658.1|	-	0.015	14.8	0.0	0.028	13.9	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|557694604|ref|YP_008797658.1|	-	0.043	13.6	0.0	0.083	12.7	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|557694604|ref|YP_008797658.1|	-	0.15	11.7	0.0	0.23	11.1	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Radical_SAM	PF04055.16	gi|557694605|ref|YP_008797659.1|	-	3.6e-13	50.0	0.0	3e-12	47.0	0.0	2.3	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|557694605|ref|YP_008797659.1|	-	0.0045	16.8	0.0	0.011	15.6	0.0	1.7	1	0	0	1	1	1	1	B12	binding	domain
PspC	PF04024.7	gi|557694606|ref|YP_008797660.1|	-	6e-16	57.6	0.3	6e-16	57.6	0.2	2.4	2	1	0	2	2	2	1	PspC	domain
MMgT	PF10270.4	gi|557694606|ref|YP_008797660.1|	-	0.67	10.4	4.8	0.26	11.7	0.5	2.2	2	0	0	2	2	2	0	Membrane	magnesium	transporter
Homoserine_dh	PF00742.14	gi|557694608|ref|YP_008797662.1|	-	9.8e-53	178.4	0.1	1.9e-52	177.5	0.1	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.11	gi|557694608|ref|YP_008797662.1|	-	1.9e-12	47.5	0.1	4.8e-12	46.2	0.0	1.7	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.16	gi|557694608|ref|YP_008797662.1|	-	0.00019	21.1	0.1	0.00049	19.7	0.1	1.8	1	1	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Semialdhyde_dh	PF01118.19	gi|557694608|ref|YP_008797662.1|	-	0.068	13.4	1.6	0.81	10.0	1.1	2.4	1	1	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
AA_kinase	PF00696.23	gi|557694609|ref|YP_008797663.1|	-	7e-55	186.2	0.1	1.2e-54	185.3	0.0	1.4	1	0	0	1	1	1	1	Amino	acid	kinase	family
ACT_7	PF13840.1	gi|557694609|ref|YP_008797663.1|	-	2.2e-24	84.7	1.0	2.3e-11	43.0	0.2	2.5	2	0	0	2	2	2	2	ACT	domain
ACT	PF01842.20	gi|557694609|ref|YP_008797663.1|	-	8.9e-23	79.3	4.1	7.3e-13	47.7	0.0	3.2	4	0	0	4	4	4	2	ACT	domain
ACT_6	PF13740.1	gi|557694609|ref|YP_008797663.1|	-	0.00016	21.2	1.4	0.011	15.3	0.0	3.2	3	0	0	3	3	3	1	ACT	domain
LytR_C	PF13399.1	gi|557694609|ref|YP_008797663.1|	-	0.045	14.1	0.1	3.9	7.9	0.0	2.9	2	1	1	3	3	3	0	LytR	cell	envelope-related	transcriptional	attenuator
DUF2283	PF10049.4	gi|557694612|ref|YP_008797666.1|	-	1.3e-11	44.1	0.9	1.8e-11	43.7	0.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2283)
SBP_bac_3	PF00497.15	gi|557694613|ref|YP_008797667.1|	-	0.054	12.7	0.0	0.061	12.5	0.0	1.0	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	3
MS_channel	PF00924.13	gi|557694615|ref|YP_008797669.1|	-	5.4e-20	71.6	4.8	5.4e-20	71.6	3.3	1.9	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Gly-zipper_OmpA	PF13436.1	gi|557694615|ref|YP_008797669.1|	-	2.9	7.5	8.7	5.7	6.6	6.0	1.4	1	0	0	1	1	1	0	Glycine-zipper	containing	OmpA-like	membrane	domain
Peptidase_M50	PF02163.17	gi|557694616|ref|YP_008797670.1|	-	5.2e-26	90.8	0.3	1.7e-25	89.1	0.2	1.8	1	1	0	1	1	1	1	Peptidase	family	M50
ATP_bind_3	PF01171.15	gi|557694617|ref|YP_008797671.1|	-	2.5e-18	66.2	0.0	6.1e-18	64.9	0.0	1.7	1	1	0	1	1	1	1	PP-loop	family
tRNA_Me_trans	PF03054.11	gi|557694617|ref|YP_008797671.1|	-	8.7e-05	21.2	0.0	0.00012	20.7	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
ATP_bind_4	PF01902.12	gi|557694617|ref|YP_008797671.1|	-	0.0038	16.6	0.1	0.0065	15.8	0.0	1.4	2	0	0	2	2	2	1	ATP-binding	region
PAPS_reduct	PF01507.14	gi|557694617|ref|YP_008797671.1|	-	0.015	15.1	0.0	0.032	14.0	0.0	1.6	2	0	0	2	2	2	0	Phosphoadenosine	phosphosulfate	reductase	family
Asn_synthase	PF00733.16	gi|557694617|ref|YP_008797671.1|	-	0.084	12.3	0.0	0.13	11.7	0.0	1.3	1	0	0	1	1	1	0	Asparagine	synthase
DUF2392	PF10288.4	gi|557694617|ref|YP_008797671.1|	-	0.09	13.1	0.0	0.57	10.5	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2392)
DUF2845	PF11006.3	gi|557694617|ref|YP_008797671.1|	-	0.12	12.1	0.2	0.27	11.1	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2845)
RecR	PF02132.10	gi|557694617|ref|YP_008797671.1|	-	1.7	8.1	13.9	0.049	13.0	1.0	3.7	4	0	0	4	4	4	0	RecR	protein
FdhD-NarQ	PF02634.10	gi|557694618|ref|YP_008797672.1|	-	3.5e-53	180.4	0.1	4e-53	180.2	0.1	1.0	1	0	0	1	1	1	1	FdhD/NarQ	family
MoeA_N	PF03453.12	gi|557694619|ref|YP_008797673.1|	-	2.4e-46	157.0	0.0	3.8e-46	156.3	0.0	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|557694619|ref|YP_008797673.1|	-	7e-33	113.0	0.2	1.3e-32	112.2	0.2	1.4	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|557694619|ref|YP_008797673.1|	-	1.9e-17	62.9	0.8	6.8e-17	61.1	0.0	2.3	3	0	0	3	3	3	1	MoeA	C-terminal	region	(domain	IV)
PELOTA_1	PF15608.1	gi|557694619|ref|YP_008797673.1|	-	0.079	12.7	0.0	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	PELOTA	RNA	binding	domain
MoeA_N	PF03453.12	gi|557694620|ref|YP_008797674.1|	-	1.3e-51	174.1	0.4	3e-51	172.9	0.3	1.6	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
PBP_like	PF12727.2	gi|557694620|ref|YP_008797674.1|	-	3.6e-51	172.8	0.0	6.4e-51	172.0	0.0	1.4	1	0	0	1	1	1	1	PBP	superfamily	domain
MoCF_biosynth	PF00994.19	gi|557694620|ref|YP_008797674.1|	-	1e-24	86.5	0.1	2.4e-24	85.3	0.1	1.7	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|557694620|ref|YP_008797674.1|	-	1.3e-10	41.0	0.2	4.2e-10	39.4	0.0	2.0	2	0	0	2	2	2	1	MoeA	C-terminal	region	(domain	IV)
Phosphonate-bd	PF12974.2	gi|557694620|ref|YP_008797674.1|	-	8.8e-06	25.2	0.0	1.9e-05	24.1	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_11	PF13531.1	gi|557694620|ref|YP_008797674.1|	-	1.5e-05	24.7	0.0	3.2e-05	23.6	0.0	1.5	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
PBP_like_2	PF12849.2	gi|557694620|ref|YP_008797674.1|	-	0.034	13.6	0.0	0.056	12.9	0.0	1.4	1	0	0	1	1	1	0	PBP	superfamily	domain
RdRP	PF05183.7	gi|557694620|ref|YP_008797674.1|	-	0.038	12.6	0.1	0.057	12.1	0.0	1.1	1	0	0	1	1	1	0	RNA	dependent	RNA	polymerase
NMT1	PF09084.6	gi|557694620|ref|YP_008797674.1|	-	0.04	13.4	0.1	0.89	9.1	0.0	2.3	1	1	0	2	2	2	0	NMT1/THI5	like
DUF1945	PF09178.5	gi|557694620|ref|YP_008797674.1|	-	0.14	12.0	0.2	0.48	10.3	0.1	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1945)
Rhodanese	PF00581.15	gi|557694621|ref|YP_008797675.1|	-	1.6e-31	108.9	0.0	5.8e-15	55.6	0.0	2.1	2	0	0	2	2	2	2	Rhodanese-like	domain
Big_1	PF02369.11	gi|557694622|ref|YP_008797676.1|	-	1.6e-08	34.3	0.0	2.5e-06	27.2	0.0	2.5	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	1)
DUF4480	PF13715.1	gi|557694622|ref|YP_008797676.1|	-	0.00069	19.6	0.0	0.011	15.7	0.0	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4480)
CarboxypepD_reg	PF13620.1	gi|557694622|ref|YP_008797676.1|	-	0.0022	18.0	0.0	0.83	9.7	0.0	2.5	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
FdhE	PF04216.7	gi|557694623|ref|YP_008797677.1|	-	2.6e-17	63.5	0.0	3.1e-17	63.2	0.0	1.0	1	0	0	1	1	1	1	Protein	involved	in	formate	dehydrogenase	formation
zf-ribbon_3	PF13248.1	gi|557694623|ref|YP_008797677.1|	-	0.0003	19.8	3.0	0.0003	19.8	2.1	2.9	3	0	0	3	3	3	1	zinc-ribbon	domain
DZR	PF12773.2	gi|557694623|ref|YP_008797677.1|	-	0.0017	18.1	5.2	0.0032	17.2	1.1	2.2	1	1	1	2	2	2	2	Double	zinc	ribbon
NMD3	PF04981.8	gi|557694623|ref|YP_008797677.1|	-	0.092	11.8	1.6	0.094	11.8	0.3	1.6	2	0	0	2	2	2	0	NMD3	family
zf-TFIIB	PF13453.1	gi|557694623|ref|YP_008797677.1|	-	0.37	10.0	5.1	1	8.5	0.4	2.8	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
Lar_restr_allev	PF14354.1	gi|557694623|ref|YP_008797677.1|	-	0.44	10.8	3.8	0.79	10.0	0.1	2.3	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
HypA	PF01155.14	gi|557694623|ref|YP_008797677.1|	-	2	8.1	4.0	14	5.3	2.8	2.4	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-FPG_IleRS	PF06827.9	gi|557694623|ref|YP_008797677.1|	-	2.1	8.0	11.6	2.6	7.7	0.9	3.1	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
OrfB_Zn_ribbon	PF07282.6	gi|557694623|ref|YP_008797677.1|	-	2.7	7.7	5.2	1.5	8.5	1.0	2.3	2	1	1	3	3	3	0	Putative	transposase	DNA-binding	domain
Prok-RING_1	PF14446.1	gi|557694623|ref|YP_008797677.1|	-	3.2	7.5	7.7	1.7	8.4	0.3	2.6	3	0	0	3	3	3	0	Prokaryotic	RING	finger	family	1
PhnA_Zn_Ribbon	PF08274.7	gi|557694623|ref|YP_008797677.1|	-	3.4	7.5	5.0	12	5.7	0.2	2.8	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
TFIIS_C	PF01096.13	gi|557694623|ref|YP_008797677.1|	-	6	6.5	8.7	41	3.9	0.1	3.7	4	0	0	4	4	4	0	Transcription	factor	S-II	(TFIIS)
TF_Zn_Ribbon	PF08271.7	gi|557694623|ref|YP_008797677.1|	-	7.8	5.9	11.8	3.2	7.1	0.5	3.2	2	1	1	3	3	3	0	TFIIB	zinc-binding
Molybdopterin	PF00384.17	gi|557694624|ref|YP_008797678.1|	-	5.7e-46	157.1	3.4	1.1e-40	139.7	0.0	2.7	2	1	0	2	2	2	2	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|557694624|ref|YP_008797678.1|	-	5e-15	55.2	0.0	1.3e-14	53.8	0.0	1.8	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|557694624|ref|YP_008797678.1|	-	2.9e-13	49.3	0.5	6.4e-13	48.2	0.3	1.6	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer4_11	PF13247.1	gi|557694625|ref|YP_008797679.1|	-	6.5e-25	86.8	10.5	7e-21	73.9	3.3	3.1	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|557694625|ref|YP_008797679.1|	-	8.2e-20	70.9	0.0	1.6e-07	31.6	0.0	3.7	2	1	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|557694625|ref|YP_008797679.1|	-	1.3e-13	50.3	15.9	0.017	15.6	0.0	4.7	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|557694625|ref|YP_008797679.1|	-	2.7e-11	43.5	21.8	3e-07	30.6	4.1	3.2	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|557694625|ref|YP_008797679.1|	-	4e-10	38.8	33.8	7.2e-06	25.3	2.0	5.7	6	0	0	6	6	6	3	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|557694625|ref|YP_008797679.1|	-	3.6e-09	36.0	35.3	0.00021	21.0	2.6	5.2	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|557694625|ref|YP_008797679.1|	-	1.4e-08	34.3	24.5	0.0013	18.5	4.3	3.9	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|557694625|ref|YP_008797679.1|	-	3e-07	29.9	37.1	3.7e-06	26.5	0.6	5.0	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|557694625|ref|YP_008797679.1|	-	1.9e-05	24.5	19.3	0.00058	19.8	8.0	3.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|557694625|ref|YP_008797679.1|	-	4.2e-05	23.3	27.0	0.00064	19.5	5.7	3.6	4	0	0	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|557694625|ref|YP_008797679.1|	-	0.00017	22.2	20.0	0.76	10.5	1.5	5.0	3	1	2	5	5	5	3	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|557694625|ref|YP_008797679.1|	-	0.00033	20.7	34.9	0.0054	16.9	1.9	4.9	5	0	0	5	5	5	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|557694625|ref|YP_008797679.1|	-	0.026	15.0	24.5	0.044	14.3	0.4	4.0	3	1	0	3	3	2	0	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|557694625|ref|YP_008797679.1|	-	0.058	13.7	1.0	0.058	13.7	0.7	4.5	3	1	3	6	6	6	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|557694625|ref|YP_008797679.1|	-	0.12	12.7	19.4	0.43	11.0	0.6	4.6	4	1	0	4	4	3	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|557694625|ref|YP_008797679.1|	-	0.5	10.8	24.6	0.45	10.9	0.2	4.4	3	1	0	3	3	3	0	4Fe-4S	dicluster	domain
NrfD	PF03916.9	gi|557694626|ref|YP_008797680.1|	-	4.4e-17	62.4	30.8	1e-16	61.2	21.4	1.5	1	1	0	1	1	1	1	Polysulphide	reductase,	NrfD
AF0941-like	PF14591.1	gi|557694627|ref|YP_008797681.1|	-	0.069	13.1	0.2	0.12	12.4	0.1	1.4	1	0	0	1	1	1	0	AF0941-like
Ima1_N	PF09779.4	gi|557694628|ref|YP_008797682.1|	-	0.036	14.5	0.1	0.046	14.2	0.0	1.1	1	0	0	1	1	1	0	Ima1	N-terminal	domain
Rotamase	PF00639.16	gi|557694628|ref|YP_008797682.1|	-	0.047	14.4	0.8	4.3	8.1	0.0	2.2	1	1	1	2	2	2	0	PPIC-type	PPIASE	domain
DUF4158	PF13700.1	gi|557694628|ref|YP_008797682.1|	-	0.096	12.1	0.1	1.2	8.5	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4158)
FTHFS	PF01268.14	gi|557694628|ref|YP_008797682.1|	-	0.1	10.5	0.3	0.12	10.3	0.2	1.0	1	0	0	1	1	1	0	Formate--tetrahydrofolate	ligase
DSS1_SEM1	PF05160.8	gi|557694628|ref|YP_008797682.1|	-	1.8	8.4	4.9	0.4	10.4	0.2	2.2	2	0	0	2	2	2	0	DSS1/SEM1	family
Big_3	PF07523.7	gi|557694629|ref|YP_008797683.1|	-	0.097	12.7	0.0	0.24	11.5	0.0	1.6	1	0	0	1	1	1	0	Bacterial	Ig-like	domain	(group	3)
FAD_binding_7	PF03441.9	gi|557694630|ref|YP_008797684.1|	-	8.4e-39	133.4	0.8	1.8e-38	132.3	0.6	1.6	1	1	0	1	1	1	1	FAD	binding	domain	of	DNA	photolyase
DNA_photolyase	PF00875.13	gi|557694630|ref|YP_008797684.1|	-	4.1e-12	46.1	0.1	8.4e-12	45.1	0.0	1.5	1	0	0	1	1	1	1	DNA	photolyase
Acetyltransf_10	PF13673.1	gi|557694631|ref|YP_008797685.1|	-	8.1e-13	48.5	0.0	9.2e-13	48.3	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|557694631|ref|YP_008797685.1|	-	1.1e-12	47.8	0.0	1.4e-12	47.4	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_4	PF13420.1	gi|557694631|ref|YP_008797685.1|	-	1.6e-12	47.6	0.0	2e-12	47.3	0.0	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|557694631|ref|YP_008797685.1|	-	2.5e-11	43.5	0.0	3.4e-11	43.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|557694631|ref|YP_008797685.1|	-	5.6e-08	33.0	0.0	6.4e-08	32.8	0.0	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|557694631|ref|YP_008797685.1|	-	6.1e-07	29.3	0.0	1.6e-06	27.9	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|557694631|ref|YP_008797685.1|	-	1.8e-05	24.6	0.0	3.8e-05	23.6	0.0	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|557694631|ref|YP_008797685.1|	-	3.3e-05	23.5	0.0	5.1e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Malic_M	PF03949.10	gi|557694632|ref|YP_008797686.1|	-	3.9e-69	233.0	0.3	4.9e-69	232.7	0.2	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|557694632|ref|YP_008797686.1|	-	1.1e-26	93.5	0.0	3.3e-24	85.4	0.0	2.7	1	1	0	1	1	1	1	Malic	enzyme,	N-terminal	domain
DUF3391	PF11871.3	gi|557694632|ref|YP_008797686.1|	-	0.024	14.8	0.1	0.046	13.9	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3391)
CCG	PF02754.11	gi|557694633|ref|YP_008797687.1|	-	4.3e-28	97.1	1.2	1.9e-16	59.8	0.0	2.9	3	0	0	3	3	3	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|557694633|ref|YP_008797687.1|	-	2.1e-12	46.8	3.3	2.1e-12	46.8	2.3	2.1	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|557694633|ref|YP_008797687.1|	-	9.6e-10	38.5	3.9	9.6e-10	38.5	2.7	2.5	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|557694633|ref|YP_008797687.1|	-	2e-08	34.5	11.3	0.00074	19.8	0.8	3.8	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|557694633|ref|YP_008797687.1|	-	3e-08	33.8	2.1	3e-08	33.8	1.5	2.4	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|557694633|ref|YP_008797687.1|	-	1.3e-07	31.2	8.1	1.3e-07	31.2	5.6	2.2	3	1	0	3	3	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|557694633|ref|YP_008797687.1|	-	1.3e-06	27.9	14.2	0.0052	16.6	2.6	2.9	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|557694633|ref|YP_008797687.1|	-	4e-06	27.0	9.4	4e-06	27.0	6.5	2.4	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
Nitrate_red_gam	PF02665.9	gi|557694633|ref|YP_008797687.1|	-	3.7e-05	23.2	4.8	7.8e-05	22.1	3.3	1.6	1	0	0	1	1	1	1	Nitrate	reductase	gamma	subunit
Fer4	PF00037.22	gi|557694633|ref|YP_008797687.1|	-	4.8e-05	22.7	17.5	0.0046	16.5	3.4	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|557694633|ref|YP_008797687.1|	-	7.2e-05	22.8	14.4	0.0026	17.9	1.4	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|557694633|ref|YP_008797687.1|	-	0.0014	18.4	5.6	0.0014	18.4	3.9	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|557694633|ref|YP_008797687.1|	-	0.0018	18.9	12.9	0.045	14.4	9.5	2.6	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|557694633|ref|YP_008797687.1|	-	0.018	14.8	11.8	0.21	11.4	0.5	3.1	4	0	0	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|557694633|ref|YP_008797687.1|	-	0.1	13.1	7.2	4.8	7.8	0.9	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
E6	PF00518.12	gi|557694633|ref|YP_008797687.1|	-	0.79	10.0	0.0	0.79	10.0	0.0	3.1	4	0	0	4	4	4	0	Early	Protein	(E6)
ETF	PF01012.16	gi|557694634|ref|YP_008797688.1|	-	1.5e-40	138.6	0.5	4.4e-40	137.0	0.3	1.8	1	1	1	2	2	2	1	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.14	gi|557694635|ref|YP_008797689.1|	-	9.6e-34	114.8	0.0	6.5e-33	112.2	0.0	2.2	2	0	0	2	2	2	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.16	gi|557694635|ref|YP_008797689.1|	-	2e-18	66.6	3.9	2e-18	66.6	1.9	1.6	2	0	0	2	2	2	1	Electron	transfer	flavoprotein	domain
NTP_transf_3	PF12804.2	gi|557694636|ref|YP_008797690.1|	-	5e-09	36.4	0.0	7e-09	35.9	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CofC	PF01983.11	gi|557694636|ref|YP_008797690.1|	-	0.0094	14.9	0.0	0.022	13.7	0.0	1.6	2	0	0	2	2	2	1	Guanylyl	transferase	CofC	like
CTP_transf_3	PF02348.14	gi|557694636|ref|YP_008797690.1|	-	0.09	12.3	0.0	0.2	11.2	0.0	1.7	1	1	0	1	1	1	0	Cytidylyltransferase
AIRS_C	PF02769.17	gi|557694637|ref|YP_008797691.1|	-	1.4e-18	67.3	0.1	2.2e-18	66.7	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|557694637|ref|YP_008797691.1|	-	1.2e-08	35.0	0.0	2.4e-08	34.0	0.0	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Nitroreductase	PF00881.19	gi|557694638|ref|YP_008797692.1|	-	3.2e-28	98.6	0.0	4.3e-28	98.1	0.0	1.2	1	0	0	1	1	1	1	Nitroreductase	family
TM1586_NiRdase	PF14512.1	gi|557694638|ref|YP_008797692.1|	-	0.00035	19.8	0.4	0.62	9.2	0.1	2.8	2	1	1	3	3	3	3	Putative	TM	nitroreductase
DUF3323	PF11796.3	gi|557694638|ref|YP_008797692.1|	-	0.1	11.9	0.0	0.12	11.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	N-terminus	(DUF3323)
Oxidored_molyb	PF00174.14	gi|557694639|ref|YP_008797693.1|	-	1.5e-32	112.3	0.0	1.8e-32	112.0	0.0	1.1	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
tRNA-synt_1	PF00133.17	gi|557694640|ref|YP_008797694.1|	-	4.3e-181	602.9	0.2	6.1e-181	602.4	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|557694640|ref|YP_008797694.1|	-	3e-34	117.9	1.1	7.6e-34	116.6	0.7	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|557694640|ref|YP_008797694.1|	-	6.2e-23	81.0	2.6	2.9e-09	36.1	0.0	4.0	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.14	gi|557694640|ref|YP_008797694.1|	-	1.2e-08	34.4	0.0	0.0042	16.2	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|557694640|ref|YP_008797694.1|	-	0.00089	18.0	0.0	0.0034	16.1	0.0	1.9	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1_2	PF13603.1	gi|557694640|ref|YP_008797694.1|	-	0.038	13.2	0.0	0.088	12.0	0.0	1.6	1	0	0	1	1	1	0	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1d	PF00750.14	gi|557694640|ref|YP_008797694.1|	-	0.045	12.5	0.2	0.8	8.4	0.1	2.6	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(R)
Desulfoferrod_N	PF06397.7	gi|557694640|ref|YP_008797694.1|	-	0.33	10.3	1.9	18	4.7	0.0	2.5	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
Zn-ribbon_8	PF09723.5	gi|557694640|ref|YP_008797694.1|	-	0.7	9.8	7.9	14	5.6	0.1	4.5	5	0	0	5	5	5	0	Zinc	ribbon	domain
DZR	PF12773.2	gi|557694641|ref|YP_008797695.1|	-	2e-08	33.9	6.8	2e-07	30.7	5.1	2.0	1	1	1	2	2	2	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|557694641|ref|YP_008797695.1|	-	5.4e-07	28.6	9.2	2.8e-06	26.3	0.8	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|557694641|ref|YP_008797695.1|	-	7.1e-07	28.5	4.7	0.00026	20.3	0.9	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|557694641|ref|YP_008797695.1|	-	0.0035	16.8	7.3	1.9	8.0	0.1	3.4	3	0	0	3	3	3	1	NADH	pyrophosphatase	zinc	ribbon	domain
zf-RanBP	PF00641.13	gi|557694641|ref|YP_008797695.1|	-	0.012	14.6	2.5	0.012	14.6	1.7	2.3	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
TF_Zn_Ribbon	PF08271.7	gi|557694641|ref|YP_008797695.1|	-	0.024	13.9	11.1	0.68	9.3	1.1	3.2	2	1	1	3	3	3	0	TFIIB	zinc-binding
Auto_anti-p27	PF06677.7	gi|557694641|ref|YP_008797695.1|	-	0.029	14.1	3.1	0.029	14.1	2.2	2.9	2	1	1	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-C3HC4_3	PF13920.1	gi|557694641|ref|YP_008797695.1|	-	0.03	14.0	7.6	0.13	11.9	2.9	2.7	2	1	1	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF4428	PF14471.1	gi|557694641|ref|YP_008797695.1|	-	0.069	12.9	0.9	0.069	12.9	0.6	3.2	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4428)
A2L_zn_ribbon	PF08792.5	gi|557694641|ref|YP_008797695.1|	-	0.13	11.7	6.1	0.33	10.4	0.0	3.2	4	0	0	4	4	4	0	A2L	zinc	ribbon	domain
Rad50_zn_hook	PF04423.9	gi|557694641|ref|YP_008797695.1|	-	0.15	11.5	0.3	0.15	11.5	0.2	2.3	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
DctQ	PF04290.7	gi|557694641|ref|YP_008797695.1|	-	0.25	11.1	1.7	0.34	10.6	1.2	1.2	1	0	0	1	1	1	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
Nudix_N_2	PF14803.1	gi|557694641|ref|YP_008797695.1|	-	0.36	10.5	10.4	8	6.2	0.6	3.5	3	0	0	3	3	3	0	Nudix	N-terminal
HypA	PF01155.14	gi|557694641|ref|YP_008797695.1|	-	0.4	10.3	4.5	3.9	7.2	3.1	2.2	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
OrfB_Zn_ribbon	PF07282.6	gi|557694641|ref|YP_008797695.1|	-	0.45	10.2	6.9	0.18	11.4	0.4	2.7	1	1	2	3	3	3	0	Putative	transposase	DNA-binding	domain
Ribosomal_L40e	PF01020.12	gi|557694641|ref|YP_008797695.1|	-	0.6	9.7	2.8	4.4	6.9	0.0	2.6	1	1	1	3	3	3	0	Ribosomal	L40e	family
LIM	PF00412.17	gi|557694641|ref|YP_008797695.1|	-	0.65	10.1	3.6	0.94	9.6	0.1	2.6	2	1	1	3	3	3	0	LIM	domain
zf-C2HC5	PF06221.8	gi|557694641|ref|YP_008797695.1|	-	0.74	9.6	8.9	27	4.6	5.5	2.5	1	1	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
DUF3040	PF11239.3	gi|557694641|ref|YP_008797695.1|	-	1.1	9.3	0.0	1.1	9.3	0.0	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3040)
GATA	PF00320.22	gi|557694641|ref|YP_008797695.1|	-	1.2	8.5	3.6	89	2.5	0.2	2.5	1	1	1	2	2	2	0	GATA	zinc	finger
FYVE	PF01363.16	gi|557694641|ref|YP_008797695.1|	-	1.6	8.6	5.0	8	6.4	3.1	2.2	1	1	1	2	2	2	0	FYVE	zinc	finger
DNA_RNApol_7kD	PF03604.8	gi|557694641|ref|YP_008797695.1|	-	2.1	7.8	7.5	9.8	5.7	0.5	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Cys_rich_CPCC	PF14206.1	gi|557694641|ref|YP_008797695.1|	-	2.5	7.7	6.1	1.6	8.3	1.8	2.1	1	1	1	2	2	2	0	Cysteine-rich	CPCC
zf-C3HC4_2	PF13923.1	gi|557694641|ref|YP_008797695.1|	-	3	7.9	8.4	31	4.7	3.6	2.8	2	1	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Prok-RING_1	PF14446.1	gi|557694641|ref|YP_008797695.1|	-	3.2	7.5	11.3	1.1	9.0	1.0	3.1	2	1	0	3	3	3	0	Prokaryotic	RING	finger	family	1
UPF0547	PF10571.4	gi|557694641|ref|YP_008797695.1|	-	3.5	7.4	13.2	4.6	7.0	2.6	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
PhnA_Zn_Ribbon	PF08274.7	gi|557694641|ref|YP_008797695.1|	-	4.6	7.1	7.8	4.6	7.1	0.4	3.1	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
zf-C4H2	PF10146.4	gi|557694641|ref|YP_008797695.1|	-	5.6	6.9	9.1	12	5.8	6.3	1.3	1	1	0	1	1	1	0	Zinc	finger-containing	protein
zf-IS66	PF13005.2	gi|557694641|ref|YP_008797695.1|	-	5.6	7.0	11.0	6.8	6.7	0.4	3.8	4	0	0	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
GCC2_GCC3	PF07699.8	gi|557694641|ref|YP_008797695.1|	-	7.2	6.2	7.4	0.38	10.3	1.1	1.9	1	1	0	1	1	1	0	GCC2	and	GCC3
DUF1610	PF07754.6	gi|557694641|ref|YP_008797695.1|	-	8.4	6.6	11.4	36	4.5	0.0	3.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1610)
LSM	PF01423.17	gi|557694642|ref|YP_008797696.1|	-	9.3e-21	73.1	0.1	1e-20	72.9	0.0	1.0	1	0	0	1	1	1	1	LSM	domain
DUF4218	PF13960.1	gi|557694642|ref|YP_008797696.1|	-	0.061	12.7	0.0	0.068	12.6	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4218)
LSM14	PF12701.2	gi|557694642|ref|YP_008797696.1|	-	0.064	13.0	0.0	0.08	12.7	0.0	1.2	1	0	0	1	1	1	0	Scd6-like	Sm	domain
SM-ATX	PF14438.1	gi|557694642|ref|YP_008797696.1|	-	0.12	12.3	0.0	0.12	12.2	0.0	1.2	1	0	0	1	1	1	0	Ataxin	2	SM	domain
AdoMet_Synthase	PF01941.14	gi|557694643|ref|YP_008797697.1|	-	5.1e-150	499.3	1.9	6.2e-150	499.1	1.3	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
DUF91	PF01939.11	gi|557694644|ref|YP_008797698.1|	-	7.8e-58	195.3	0.1	9.2e-58	195.0	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF91
DUF3782	PF12644.2	gi|557694644|ref|YP_008797698.1|	-	0.0076	16.0	0.1	0.013	15.3	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3782)
PDDEXK_1	PF12705.2	gi|557694644|ref|YP_008797698.1|	-	0.07	12.5	0.0	0.088	12.1	0.0	1.1	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
PMT_2	PF13231.1	gi|557694645|ref|YP_008797699.1|	-	6.4e-13	48.8	15.4	6.4e-13	48.8	10.7	2.8	3	0	0	3	3	3	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.13	gi|557694645|ref|YP_008797699.1|	-	1e-10	41.3	18.4	1e-10	41.3	12.7	3.7	2	2	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
DUF1614	PF07758.6	gi|557694645|ref|YP_008797699.1|	-	0.068	12.9	0.0	0.068	12.9	0.0	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1614)
Radical_SAM	PF04055.16	gi|557694646|ref|YP_008797700.1|	-	2.5e-21	76.5	0.0	6.7e-21	75.1	0.0	1.7	1	0	0	1	1	1	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.19	gi|557694646|ref|YP_008797700.1|	-	9.5e-08	31.9	0.5	3.5e-07	30.1	0.1	2.3	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|557694646|ref|YP_008797700.1|	-	0.068	13.2	0.1	0.22	11.6	0.0	1.9	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
Bac_luciferase	PF00296.15	gi|557694647|ref|YP_008797701.1|	-	3.3e-35	121.6	2.3	2.5e-34	118.8	1.6	1.9	1	1	0	1	1	1	1	Luciferase-like	monooxygenase
Abhydrolase_6	PF12697.2	gi|557694648|ref|YP_008797702.1|	-	9.7e-39	133.5	0.0	1.1e-38	133.3	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|557694648|ref|YP_008797702.1|	-	1.2e-20	74.0	0.0	3.8e-20	72.4	0.0	1.7	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|557694648|ref|YP_008797702.1|	-	1.3e-20	73.6	0.0	1.1e-19	70.6	0.0	2.0	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|557694648|ref|YP_008797702.1|	-	1e-06	28.1	0.1	0.0056	15.9	0.0	2.9	2	1	1	3	3	3	2	Dienelactone	hydrolase	family
Ser_hydrolase	PF06821.8	gi|557694648|ref|YP_008797702.1|	-	1.3e-06	28.1	0.0	0.047	13.2	0.0	2.2	2	0	0	2	2	2	2	Serine	hydrolase
Ndr	PF03096.9	gi|557694648|ref|YP_008797702.1|	-	0.00011	20.8	0.0	0.00012	20.6	0.0	1.2	1	0	0	1	1	1	1	Ndr	family
FSH1	PF03959.8	gi|557694648|ref|YP_008797702.1|	-	0.0003	20.2	0.0	0.0056	16.1	0.0	2.4	2	1	0	2	2	2	1	Serine	hydrolase	(FSH1)
Peptidase_S9	PF00326.16	gi|557694648|ref|YP_008797702.1|	-	0.00069	18.8	0.0	0.1	11.8	0.0	2.2	2	0	0	2	2	2	1	Prolyl	oligopeptidase	family
UPF0227	PF05728.7	gi|557694648|ref|YP_008797702.1|	-	0.001	18.7	0.0	0.0022	17.7	0.0	1.5	2	0	0	2	2	2	1	Uncharacterised	protein	family	(UPF0227)
Esterase	PF00756.15	gi|557694648|ref|YP_008797702.1|	-	0.0017	17.8	0.1	0.0043	16.4	0.0	1.6	2	0	0	2	2	2	1	Putative	esterase
Abhydrolase_3	PF07859.8	gi|557694648|ref|YP_008797702.1|	-	0.0031	17.1	0.0	0.005	16.4	0.0	1.3	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
BAAT_C	PF08840.6	gi|557694648|ref|YP_008797702.1|	-	0.0039	16.9	0.0	0.014	15.1	0.0	1.8	2	0	0	2	2	2	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
PGAP1	PF07819.8	gi|557694648|ref|YP_008797702.1|	-	0.0051	16.4	0.3	0.081	12.4	0.1	2.1	2	0	0	2	2	2	1	PGAP1-like	protein
Abhydrolase_4	PF08386.5	gi|557694648|ref|YP_008797702.1|	-	0.0055	16.5	0.0	0.0087	15.9	0.0	1.3	1	0	0	1	1	1	1	TAP-like	protein
Thioesterase	PF00975.15	gi|557694648|ref|YP_008797702.1|	-	0.0064	16.7	0.0	0.019	15.1	0.0	2.0	1	1	1	2	2	2	1	Thioesterase	domain
DUF915	PF06028.6	gi|557694648|ref|YP_008797702.1|	-	0.013	14.6	0.0	0.088	11.8	0.0	2.1	2	0	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
DUF2305	PF10230.4	gi|557694648|ref|YP_008797702.1|	-	0.016	14.6	0.0	0.029	13.8	0.0	1.4	2	0	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2305)
DUF2048	PF09752.4	gi|557694648|ref|YP_008797702.1|	-	0.018	13.9	0.1	0.041	12.7	0.1	1.7	2	1	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2048)
Lipase_3	PF01764.20	gi|557694648|ref|YP_008797702.1|	-	0.054	13.0	0.1	0.095	12.3	0.0	1.3	1	0	0	1	1	1	0	Lipase	(class	3)
Abhydrolase_2	PF02230.11	gi|557694648|ref|YP_008797702.1|	-	0.097	12.0	0.1	3	7.2	0.0	2.6	3	0	0	3	3	3	0	Phospholipase/Carboxylesterase
Chlorophyllase2	PF12740.2	gi|557694648|ref|YP_008797702.1|	-	0.12	11.1	0.2	0.47	9.2	0.0	2.0	2	1	0	2	2	2	0	Chlorophyllase	enzyme
DUF1057	PF06342.7	gi|557694648|ref|YP_008797702.1|	-	0.13	11.0	0.0	0.57	8.9	0.0	1.7	2	0	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
Hexapep	PF00132.19	gi|557694649|ref|YP_008797703.1|	-	4.6e-24	82.7	25.4	3.4e-08	32.6	3.7	6.1	3	1	3	6	6	6	6	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|557694649|ref|YP_008797703.1|	-	5e-11	41.9	24.3	5.7e-06	25.7	3.5	5.4	3	1	2	6	6	6	5	Hexapeptide	repeat	of	succinyl-transferase
SUI1	PF01253.17	gi|557694650|ref|YP_008797704.1|	-	2.5e-20	72.0	0.6	2.9e-20	71.8	0.4	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
DTW	PF03942.10	gi|557694650|ref|YP_008797704.1|	-	0.004	16.4	1.2	0.0052	16.0	0.9	1.2	1	0	0	1	1	1	1	DTW	domain
TFIIB	PF00382.14	gi|557694651|ref|YP_008797705.1|	-	1.9e-31	107.6	5.8	6.8e-16	57.8	0.2	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|557694651|ref|YP_008797705.1|	-	1.1e-14	53.4	1.8	1.8e-14	52.7	1.3	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Cyclin_N	PF00134.18	gi|557694651|ref|YP_008797705.1|	-	6.8e-07	28.9	0.8	0.0012	18.3	0.1	2.1	2	0	0	2	2	2	2	Cyclin,	N-terminal	domain
HTH_11	PF08279.7	gi|557694651|ref|YP_008797705.1|	-	3.6e-06	26.5	0.1	0.0028	17.2	0.0	2.6	2	0	0	2	2	2	1	HTH	domain
HTH_AsnC-type	PF13404.1	gi|557694651|ref|YP_008797705.1|	-	1.7e-05	24.2	0.0	0.088	12.3	0.0	2.8	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
HTH_23	PF13384.1	gi|557694651|ref|YP_008797705.1|	-	8.4e-05	22.0	3.2	0.017	14.7	0.0	3.5	3	0	0	3	3	3	1	Homeodomain-like	domain
RNA_POL_M_15KD	PF02150.11	gi|557694651|ref|YP_008797705.1|	-	0.0001	21.9	0.4	0.00024	20.7	0.2	1.6	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
HTH_3	PF01381.17	gi|557694651|ref|YP_008797705.1|	-	0.00028	20.6	0.1	0.0065	16.2	0.0	2.6	2	0	0	2	2	2	1	Helix-turn-helix
HTH_24	PF13412.1	gi|557694651|ref|YP_008797705.1|	-	0.00074	18.8	0.0	0.62	9.4	0.0	2.6	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
zinc_ribbon_2	PF13240.1	gi|557694651|ref|YP_008797705.1|	-	0.0021	17.4	0.5	0.0043	16.4	0.4	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
TetR_N	PF00440.18	gi|557694651|ref|YP_008797705.1|	-	0.004	16.7	0.1	0.025	14.2	0.0	2.4	2	1	0	2	2	2	1	Bacterial	regulatory	proteins,	tetR	family
Sigma70_r4_2	PF08281.7	gi|557694651|ref|YP_008797705.1|	-	0.0043	16.4	0.1	0.043	13.2	0.0	2.4	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_Crp_2	PF13545.1	gi|557694651|ref|YP_008797705.1|	-	0.0048	16.6	0.1	0.14	11.9	0.0	2.4	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
LacI	PF00356.16	gi|557694651|ref|YP_008797705.1|	-	0.0053	16.3	0.1	0.13	11.9	0.0	2.6	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	lacI	family
HTH_Tnp_ISL3	PF13542.1	gi|557694651|ref|YP_008797705.1|	-	0.0086	15.2	0.1	0.21	10.7	0.0	2.7	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_Mga	PF08280.6	gi|557694651|ref|YP_008797705.1|	-	0.0096	15.6	0.0	4.6	7.0	0.0	2.6	3	0	0	3	3	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Ribosomal_S27e	PF01667.12	gi|557694651|ref|YP_008797705.1|	-	0.0098	15.4	1.5	0.024	14.1	1.0	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S27
Sigma70_r4	PF04545.11	gi|557694651|ref|YP_008797705.1|	-	0.01	15.1	0.2	0.049	12.9	0.0	2.2	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_28	PF13518.1	gi|557694651|ref|YP_008797705.1|	-	0.011	15.7	0.4	1.6	8.8	0.0	3.4	3	0	0	3	3	3	0	Helix-turn-helix	domain
GntR	PF00392.16	gi|557694651|ref|YP_008797705.1|	-	0.015	14.7	0.0	1.2	8.5	0.0	2.6	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
Rrf2	PF02082.15	gi|557694651|ref|YP_008797705.1|	-	0.03	14.4	0.8	0.76	9.9	0.0	2.8	3	0	0	3	3	3	0	Transcriptional	regulator
IBR	PF01485.16	gi|557694651|ref|YP_008797705.1|	-	0.032	14.0	0.3	0.057	13.3	0.2	1.4	1	0	0	1	1	1	0	IBR	domain
zf-ribbon_3	PF13248.1	gi|557694651|ref|YP_008797705.1|	-	0.052	12.7	1.5	0.58	9.4	1.1	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|557694651|ref|YP_008797705.1|	-	0.052	13.3	0.3	0.11	12.3	0.2	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|557694651|ref|YP_008797705.1|	-	0.059	13.0	0.3	0.16	11.6	0.2	1.7	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-C4_Topoisom	PF01396.14	gi|557694651|ref|YP_008797705.1|	-	0.06	12.8	0.4	0.14	11.7	0.3	1.6	1	0	0	1	1	1	0	Topoisomerase	DNA	binding	C4	zinc	finger
HypA	PF01155.14	gi|557694651|ref|YP_008797705.1|	-	0.069	12.8	1.7	4.4	7.0	0.2	3.0	3	1	0	3	3	3	0	Hydrogenase	expression/synthesis	hypA	family
GerE	PF00196.14	gi|557694651|ref|YP_008797705.1|	-	0.074	12.3	0.1	3.7	6.9	0.0	2.7	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
HTH_31	PF13560.1	gi|557694651|ref|YP_008797705.1|	-	0.097	12.8	0.6	1.1	9.5	0.0	2.6	2	2	0	2	2	2	0	Helix-turn-helix	domain
Cyclin_C	PF02984.14	gi|557694651|ref|YP_008797705.1|	-	0.097	12.6	0.5	4.1	7.3	0.0	2.6	1	1	1	2	2	2	0	Cyclin,	C-terminal	domain
HTH_38	PF13936.1	gi|557694651|ref|YP_008797705.1|	-	0.11	12.0	4.7	6.6	6.3	0.0	3.3	4	0	0	4	4	3	0	Helix-turn-helix	domain
Rubredoxin	PF00301.15	gi|557694651|ref|YP_008797705.1|	-	0.12	12.2	1.3	0.78	9.6	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin
Auto_anti-p27	PF06677.7	gi|557694651|ref|YP_008797705.1|	-	0.17	11.6	3.0	0.18	11.5	0.7	2.1	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
YhfH	PF14149.1	gi|557694651|ref|YP_008797705.1|	-	0.2	11.4	1.2	21	4.9	0.1	2.5	2	0	0	2	2	2	0	YhfH-like	protein
DNA_RNApol_7kD	PF03604.8	gi|557694651|ref|YP_008797705.1|	-	1.2	8.6	4.9	0.33	10.4	0.8	2.0	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
tRNA-synt_1e	PF01406.14	gi|557694652|ref|YP_008797706.1|	-	2e-110	368.6	0.0	3e-110	368.0	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
DALR_2	PF09190.6	gi|557694652|ref|YP_008797706.1|	-	1.3e-16	60.5	0.1	4e-16	58.9	0.0	1.9	2	0	0	2	2	2	1	DALR	domain
tRNA-synt_1g	PF09334.6	gi|557694652|ref|YP_008797706.1|	-	1.7e-09	36.8	0.1	0.00038	19.2	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|557694652|ref|YP_008797706.1|	-	7.6e-09	34.1	0.0	1.4e-05	23.3	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1f	PF01921.13	gi|557694652|ref|YP_008797706.1|	-	2.4e-06	26.4	0.2	1.3e-05	24.1	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1d	PF00750.14	gi|557694652|ref|YP_008797706.1|	-	0.00073	18.4	1.1	0.069	11.9	0.2	2.8	2	1	0	3	3	3	2	tRNA	synthetases	class	I	(R)
DUF1949	PF09186.6	gi|557694652|ref|YP_008797706.1|	-	0.12	11.9	0.0	0.5	10.0	0.0	2.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1949)
NTP_transferase	PF00483.18	gi|557694653|ref|YP_008797707.1|	-	1.1e-37	129.6	0.0	1.5e-37	129.2	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|557694653|ref|YP_008797707.1|	-	2.4e-10	40.7	0.0	3.4e-10	40.2	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|557694653|ref|YP_008797707.1|	-	0.0083	15.6	0.0	0.014	14.9	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
PB1	PF00564.19	gi|557694653|ref|YP_008797707.1|	-	0.096	12.3	0.1	0.32	10.6	0.0	1.8	2	0	0	2	2	2	0	PB1	domain
DUF4224	PF13986.1	gi|557694653|ref|YP_008797707.1|	-	0.1	12.1	0.0	0.21	11.1	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4224)
Acetyltransf_1	PF00583.19	gi|557694654|ref|YP_008797708.1|	-	1.9e-19	69.4	0.2	2.5e-19	69.0	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|557694654|ref|YP_008797708.1|	-	1.9e-12	47.1	0.1	2.8e-12	46.6	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|557694654|ref|YP_008797708.1|	-	5.9e-12	45.7	0.0	9.2e-12	45.1	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|557694654|ref|YP_008797708.1|	-	2.1e-09	36.9	0.1	5.5e-09	35.6	0.1	1.7	1	1	0	1	1	1	1	FR47-like	protein
Acetyltransf_8	PF13523.1	gi|557694654|ref|YP_008797708.1|	-	3.5e-09	36.7	0.1	4.7e-09	36.3	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|557694654|ref|YP_008797708.1|	-	1.2e-08	34.8	0.0	2e-08	34.1	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|557694654|ref|YP_008797708.1|	-	2.8e-06	27.3	0.1	3.7e-06	26.9	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|557694654|ref|YP_008797708.1|	-	5.5e-05	23.3	0.0	8.3e-05	22.7	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|557694654|ref|YP_008797708.1|	-	0.091	12.6	0.0	0.17	11.7	0.0	1.5	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Metallophos	PF00149.23	gi|557694655|ref|YP_008797709.1|	-	2.9e-09	36.6	2.7	1.5e-08	34.2	1.8	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|557694655|ref|YP_008797709.1|	-	8.5e-06	25.6	0.1	1.6e-05	24.7	0.0	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
4HBT	PF03061.17	gi|557694656|ref|YP_008797710.1|	-	8.8e-25	86.6	4.7	4e-12	46.0	0.2	2.2	2	0	0	2	2	2	2	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|557694656|ref|YP_008797710.1|	-	0.013	15.9	0.0	0.24	11.8	0.0	2.2	2	0	0	2	2	2	0	Thioesterase-like	superfamily
MaoC_dehydratas	PF01575.14	gi|557694656|ref|YP_008797710.1|	-	0.018	14.3	0.2	0.73	9.2	0.0	2.3	2	0	0	2	2	2	0	MaoC	like	domain
X_fast-SP_rel	PF06669.6	gi|557694656|ref|YP_008797710.1|	-	0.059	13.3	0.1	0.16	11.9	0.1	1.7	1	0	0	1	1	1	0	Xylella	fastidiosa	surface	protein	related
Bac_luciferase	PF00296.15	gi|557694657|ref|YP_008797711.1|	-	6.5e-55	186.4	0.4	8.2e-55	186.0	0.3	1.1	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
PEP-utilizers_C	PF02896.13	gi|557694658|ref|YP_008797712.1|	-	2e-102	342.0	0.1	3.1e-102	341.4	0.1	1.3	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PPDK_N	PF01326.14	gi|557694658|ref|YP_008797712.1|	-	1.8e-59	201.4	0.0	9.4e-59	199.0	0.0	2.1	1	1	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers	PF00391.18	gi|557694658|ref|YP_008797712.1|	-	2.8e-23	81.2	1.6	5.9e-23	80.2	1.1	1.6	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Phage_connect_1	PF05135.8	gi|557694658|ref|YP_008797712.1|	-	0.01	15.9	0.0	0.027	14.6	0.0	1.6	1	0	0	1	1	1	0	Phage	gp6-like	head-tail	connector	protein
Penicillinase_R	PF03965.11	gi|557694659|ref|YP_008797713.1|	-	0.00032	20.7	0.0	0.00045	20.3	0.0	1.2	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_IclR	PF09339.5	gi|557694659|ref|YP_008797713.1|	-	0.011	15.3	0.0	0.027	14.0	0.0	1.7	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
PaaX	PF07848.7	gi|557694659|ref|YP_008797713.1|	-	0.015	15.3	0.4	0.038	13.9	0.3	1.6	1	0	0	1	1	1	0	PaaX-like	protein
HTH_27	PF13463.1	gi|557694659|ref|YP_008797713.1|	-	0.071	13.4	0.0	0.16	12.2	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|557694659|ref|YP_008797713.1|	-	0.13	11.9	0.0	0.35	10.5	0.0	1.7	2	0	0	2	2	2	0	MarR	family
PCNA_N	PF00705.13	gi|557694660|ref|YP_008797714.1|	-	3.7e-18	65.2	0.0	1.8e-17	63.0	0.0	1.9	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|557694660|ref|YP_008797714.1|	-	4.1e-08	33.1	0.3	4e-07	30.0	0.1	2.1	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|557694660|ref|YP_008797714.1|	-	1e-05	24.4	0.3	4.4e-05	22.3	0.2	1.7	1	1	0	1	1	1	1	Repair	protein	Rad1/Rec1/Rad17
DAP_B	PF07930.7	gi|557694660|ref|YP_008797714.1|	-	0.028	14.1	0.1	0.1	12.3	0.0	1.9	2	0	0	2	2	2	0	D-aminopeptidase,	domain	B
Rad9	PF04139.8	gi|557694660|ref|YP_008797714.1|	-	0.058	12.5	0.0	0.13	11.3	0.0	1.7	1	1	0	1	1	1	0	Rad9
Peptidase_M50	PF02163.17	gi|557694661|ref|YP_008797715.1|	-	3e-18	65.4	6.7	2.1e-13	49.6	1.3	2.5	1	1	1	2	2	2	2	Peptidase	family	M50
LPAM_1	PF08139.7	gi|557694661|ref|YP_008797715.1|	-	1.2	9.4	0.0	1.2	9.4	0.0	3.7	3	1	0	3	3	3	0	Prokaryotic	membrane	lipoprotein	lipid	attachment	site
GFO_IDH_MocA_C	PF02894.12	gi|557694662|ref|YP_008797716.1|	-	0.083	12.6	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	C-terminal	alpha/beta	domain
Nitroreductase	PF00881.19	gi|557694663|ref|YP_008797717.1|	-	2.1e-26	92.7	0.0	2.5e-26	92.4	0.0	1.1	1	0	0	1	1	1	1	Nitroreductase	family
AMO	PF02461.11	gi|557694663|ref|YP_008797717.1|	-	0.043	13.5	0.0	0.07	12.8	0.0	1.2	1	0	0	1	1	1	0	Ammonia	monooxygenase
TM1586_NiRdase	PF14512.1	gi|557694663|ref|YP_008797717.1|	-	0.14	11.3	0.0	2.5	7.2	0.0	2.1	2	0	0	2	2	2	0	Putative	TM	nitroreductase
UPF0052	PF01933.13	gi|557694664|ref|YP_008797718.1|	-	6.9e-47	160.2	0.0	8.2e-47	159.9	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0052
CofC	PF01983.11	gi|557694665|ref|YP_008797719.1|	-	9.9e-20	70.4	0.0	1.3e-19	70.0	0.0	1.1	1	0	0	1	1	1	1	Guanylyl	transferase	CofC	like
NTP_transf_3	PF12804.2	gi|557694665|ref|YP_008797719.1|	-	0.002	18.2	0.0	0.0026	17.8	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
EcsC	PF12787.2	gi|557694665|ref|YP_008797719.1|	-	0.0069	15.8	0.0	0.011	15.1	0.0	1.2	1	0	0	1	1	1	1	EcsC	protein	family
UPF0197	PF05251.7	gi|557694666|ref|YP_008797720.1|	-	0.033	14.4	3.0	0.094	13.0	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0197)
Beta-Casp	PF10996.3	gi|557694667|ref|YP_008797721.1|	-	1.8e-16	60.1	0.0	1.1e-15	57.6	0.0	2.1	2	0	0	2	2	2	1	Beta-Casp	domain
Lactamase_B_2	PF12706.2	gi|557694667|ref|YP_008797721.1|	-	1.8e-14	53.7	0.1	4.7e-14	52.3	0.0	1.7	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|557694667|ref|YP_008797721.1|	-	7.5e-14	51.8	0.1	1.5e-13	50.8	0.1	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|557694667|ref|YP_008797721.1|	-	3.9e-11	42.5	0.0	8.2e-11	41.5	0.0	1.6	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_3	PF13483.1	gi|557694667|ref|YP_008797721.1|	-	0.00053	19.7	0.2	0.0057	16.3	0.0	2.3	1	1	1	2	2	2	1	Beta-lactamase	superfamily	domain
Methyltransf_26	PF13659.1	gi|557694667|ref|YP_008797721.1|	-	0.1	12.6	0.0	0.17	11.8	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
DUF2353	PF09789.4	gi|557694667|ref|YP_008797721.1|	-	0.15	11.2	0.0	0.26	10.5	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	coiled-coil	protein	(DUF2353)
DS	PF01916.12	gi|557694669|ref|YP_008797723.1|	-	6.4e-63	212.6	0.0	7.5e-63	212.4	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
AA_kinase	PF00696.23	gi|557694670|ref|YP_008797724.1|	-	5.6e-49	166.8	0.4	1.1e-48	165.9	0.1	1.5	2	0	0	2	2	2	1	Amino	acid	kinase	family
ACT_7	PF13840.1	gi|557694670|ref|YP_008797724.1|	-	8.4e-08	31.6	1.7	5.2e-07	29.0	0.1	2.5	2	0	0	2	2	2	1	ACT	domain
ACT	PF01842.20	gi|557694670|ref|YP_008797724.1|	-	0.017	14.6	0.3	0.12	11.9	0.0	2.6	4	0	0	4	4	4	0	ACT	domain
DUF2007	PF09413.5	gi|557694670|ref|YP_008797724.1|	-	0.027	14.2	0.0	0.075	12.8	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2007)
Ald_Xan_dh_C2	PF02738.13	gi|557694671|ref|YP_008797725.1|	-	2.5e-136	455.2	0.0	3e-136	454.9	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557694671|ref|YP_008797725.1|	-	2.3e-29	101.6	0.3	5.3e-29	100.5	0.0	1.8	2	0	0	2	2	2	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
UvdE	PF03851.9	gi|557694671|ref|YP_008797725.1|	-	0.027	13.4	0.0	0.048	12.6	0.0	1.3	1	0	0	1	1	1	0	UV-endonuclease	UvdE
FAD_binding_5	PF00941.16	gi|557694672|ref|YP_008797726.1|	-	2.7e-46	157.1	0.1	4e-46	156.5	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|557694672|ref|YP_008797726.1|	-	1.7e-26	92.1	0.0	3.1e-26	91.2	0.0	1.4	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Fer2_2	PF01799.15	gi|557694673|ref|YP_008797727.1|	-	7.5e-26	89.8	0.1	7.5e-26	89.8	0.1	1.5	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|557694673|ref|YP_008797727.1|	-	1.2e-08	34.5	0.7	1.2e-08	34.5	0.5	2.2	1	1	1	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|557694673|ref|YP_008797727.1|	-	6.1e-05	22.8	0.6	9.7e-05	22.1	0.1	1.6	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|557694673|ref|YP_008797727.1|	-	0.00011	21.8	0.6	0.00066	19.4	0.2	2.3	1	1	1	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
HEAT_2	PF13646.1	gi|557694674|ref|YP_008797728.1|	-	4.5e-52	174.2	3.0	9e-18	64.3	0.1	2.4	1	1	3	4	4	4	4	HEAT	repeats
HEAT	PF02985.17	gi|557694674|ref|YP_008797728.1|	-	4.4e-14	51.2	0.1	0.0071	16.3	0.0	4.1	4	0	0	4	4	4	3	HEAT	repeat
HEAT_PBS	PF03130.11	gi|557694674|ref|YP_008797728.1|	-	1.2e-13	50.1	1.3	5.1e-05	23.3	0.0	3.7	4	0	0	4	4	4	3	PBS	lyase	HEAT-like	repeat
HEAT_EZ	PF13513.1	gi|557694674|ref|YP_008797728.1|	-	8.1e-11	42.0	0.3	0.0024	18.3	0.0	3.6	2	1	2	4	4	4	3	HEAT-like	repeat
Adaptin_N	PF01602.15	gi|557694674|ref|YP_008797728.1|	-	0.00028	19.3	0.0	0.0026	16.1	0.0	1.9	1	1	1	2	2	2	2	Adaptin	N	terminal	region
Arm	PF00514.18	gi|557694674|ref|YP_008797728.1|	-	0.013	15.3	0.0	5.9	6.8	0.0	3.5	4	0	0	4	4	4	0	Armadillo/beta-catenin-like	repeat
Cnd1	PF12717.2	gi|557694674|ref|YP_008797728.1|	-	0.067	13.0	0.0	9.8	5.9	0.0	3.1	2	1	0	2	2	2	0	non-SMC	mitotic	condensation	complex	subunit	1
ThiS	PF02597.15	gi|557694675|ref|YP_008797729.1|	-	5.5e-10	39.5	0.0	6.5e-10	39.3	0.0	1.1	1	0	0	1	1	1	1	ThiS	family
Urm1	PF09138.6	gi|557694675|ref|YP_008797729.1|	-	2.7e-07	30.5	0.0	3.2e-07	30.3	0.0	1.2	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
Lambda_tail_I	PF06805.7	gi|557694675|ref|YP_008797729.1|	-	0.12	12.2	0.1	0.38	10.6	0.0	1.8	2	0	0	2	2	2	0	Bacteriophage	lambda	tail	assembly	protein	I
CGI-121	PF08617.5	gi|557694676|ref|YP_008797730.1|	-	7.3e-14	51.7	0.0	9.1e-14	51.4	0.0	1.1	1	0	0	1	1	1	1	Kinase	binding	protein	CGI-121
Sua5_yciO_yrdC	PF01300.13	gi|557694677|ref|YP_008797731.1|	-	3.1e-52	176.4	0.2	3.5e-52	176.2	0.1	1.0	1	0	0	1	1	1	1	Telomere	recombination
Zn_Tnp_IS1595	PF12760.2	gi|557694678|ref|YP_008797732.1|	-	0.017	14.8	0.3	0.017	14.8	0.2	2.8	3	1	1	4	4	4	0	Transposase	zinc-ribbon	domain
TerY-C	PF15616.1	gi|557694678|ref|YP_008797732.1|	-	0.093	12.6	0.7	0.093	12.6	0.5	2.2	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
Cys_rich_CPXG	PF14255.1	gi|557694678|ref|YP_008797732.1|	-	0.11	12.2	0.5	1.6	8.6	0.1	2.5	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
TF_Zn_Ribbon	PF08271.7	gi|557694678|ref|YP_008797732.1|	-	0.14	11.4	2.1	0.88	8.9	0.1	2.5	2	0	0	2	2	2	0	TFIIB	zinc-binding
DZR	PF12773.2	gi|557694678|ref|YP_008797732.1|	-	0.26	11.1	2.2	2.7	7.9	1.5	2.3	1	1	0	1	1	1	0	Double	zinc	ribbon
Desulfoferrod_N	PF06397.7	gi|557694678|ref|YP_008797732.1|	-	0.29	10.5	2.9	5.2	6.5	0.1	3.1	3	0	0	3	3	3	0	Desulfoferrodoxin,	N-terminal	domain
zf-C2H2	PF00096.21	gi|557694678|ref|YP_008797732.1|	-	0.41	11.0	2.2	17	5.9	0.2	3.0	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-dskA_traR	PF01258.12	gi|557694678|ref|YP_008797732.1|	-	0.43	10.3	4.2	0.49	10.1	0.1	2.6	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
Zn-ribbon_8	PF09723.5	gi|557694678|ref|YP_008797732.1|	-	8.1	6.4	8.9	3.3	7.7	0.3	3.2	2	2	1	3	3	3	0	Zinc	ribbon	domain
Aminotran_4	PF01063.14	gi|557694679|ref|YP_008797733.1|	-	4e-47	160.6	0.0	4.8e-47	160.3	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	IV
Sialidase_penC	PF12135.3	gi|557694679|ref|YP_008797733.1|	-	0.93	9.1	3.8	6.1	6.5	0.7	2.7	3	0	0	3	3	3	0	Sialidase	enzyme	penultimate	C	terminal	domain
Thioredoxin_3	PF13192.1	gi|557694680|ref|YP_008797734.1|	-	4.3e-28	96.9	0.0	4.1e-21	74.5	0.1	2.1	2	0	0	2	2	2	2	Thioredoxin	domain
Glutaredoxin	PF00462.19	gi|557694680|ref|YP_008797734.1|	-	4.2e-11	42.6	0.4	6.8e-09	35.5	0.2	2.8	3	0	0	3	3	3	1	Glutaredoxin
Thioredoxin_4	PF13462.1	gi|557694680|ref|YP_008797734.1|	-	4.9e-08	33.1	0.8	0.0068	16.4	0.0	3.1	2	1	1	3	3	3	3	Thioredoxin
Thioredoxin	PF00085.15	gi|557694680|ref|YP_008797734.1|	-	2.8e-06	26.9	0.0	0.06	13.0	0.1	2.1	2	0	0	2	2	2	2	Thioredoxin
Thioredoxin_9	PF14595.1	gi|557694680|ref|YP_008797734.1|	-	1.5e-05	24.5	0.0	3.2e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|557694680|ref|YP_008797734.1|	-	0.00014	21.9	2.2	0.74	10.0	0.2	3.7	2	2	1	3	3	3	1	Thioredoxin-like	domain
DUF836	PF05768.9	gi|557694680|ref|YP_008797734.1|	-	0.00082	19.5	0.0	0.16	12.2	0.0	2.2	2	0	0	2	2	2	1	Glutaredoxin-like	domain	(DUF836)
ABC_transp_aux	PF09822.4	gi|557694680|ref|YP_008797734.1|	-	0.011	15.2	0.0	3.9	6.8	0.0	2.2	2	1	0	2	2	2	0	ABC-type	uncharacterized	transport	system
DUF393	PF04134.7	gi|557694680|ref|YP_008797734.1|	-	0.044	14.9	0.0	4.3	8.4	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF393
TraF	PF13728.1	gi|557694680|ref|YP_008797734.1|	-	0.083	12.3	0.0	8	5.8	0.0	2.4	2	1	0	2	2	2	0	F	plasmid	transfer	operon	protein
zf-Di19	PF05605.7	gi|557694680|ref|YP_008797734.1|	-	0.2	11.8	1.0	13	5.9	0.1	2.6	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
Aminotran_5	PF00266.14	gi|557694681|ref|YP_008797735.1|	-	5.8e-23	81.2	0.0	8.6e-23	80.6	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
BON	PF04972.12	gi|557694682|ref|YP_008797736.1|	-	0.03	14.0	0.4	0.03	14.0	0.3	1.6	2	0	0	2	2	2	0	BON	domain
DUF1492	PF07374.6	gi|557694683|ref|YP_008797737.1|	-	0.0086	16.1	1.0	0.02	15.0	0.3	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1492)
COG6	PF06419.6	gi|557694683|ref|YP_008797737.1|	-	0.045	11.9	0.6	0.042	11.9	0.4	1.2	1	0	0	1	1	1	0	Conserved	oligomeric	complex	COG6
DUF3496	PF12001.3	gi|557694683|ref|YP_008797737.1|	-	0.054	13.7	2.0	0.066	13.4	1.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3496)
Methyltransf_24	PF13578.1	gi|557694683|ref|YP_008797737.1|	-	0.073	13.9	0.2	0.28	12.0	0.0	1.8	1	1	1	2	2	2	0	Methyltransferase	domain
GHL13	PF14883.1	gi|557694683|ref|YP_008797737.1|	-	0.081	12.0	0.5	0.12	11.5	0.3	1.3	1	0	0	1	1	1	0	Hypothetical	glycosyl	hydrolase	family	13
Sec34	PF04136.10	gi|557694683|ref|YP_008797737.1|	-	0.13	12.0	0.8	0.14	11.8	0.5	1.1	1	0	0	1	1	1	0	Sec34-like	family
DivIVA	PF05103.8	gi|557694683|ref|YP_008797737.1|	-	0.14	12.2	9.5	0.17	11.9	6.6	1.1	1	0	0	1	1	1	0	DivIVA	protein
DASH_Duo1	PF08651.5	gi|557694683|ref|YP_008797737.1|	-	0.21	11.1	1.1	0.31	10.6	0.4	1.7	2	0	0	2	2	2	0	DASH	complex	subunit	Duo1
ATP-synt_B	PF00430.13	gi|557694683|ref|YP_008797737.1|	-	0.24	11.2	10.1	0.34	10.7	7.0	1.2	1	0	0	1	1	1	0	ATP	synthase	B/B'	CF(0)
GvpL_GvpF	PF06386.6	gi|557694683|ref|YP_008797737.1|	-	0.3	10.6	7.0	0.35	10.4	4.8	1.0	1	0	0	1	1	1	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
Spectrin	PF00435.16	gi|557694683|ref|YP_008797737.1|	-	0.53	10.5	5.7	1.2	9.4	3.9	1.6	1	1	0	1	1	1	0	Spectrin	repeat
DUF883	PF05957.8	gi|557694683|ref|YP_008797737.1|	-	1.1	9.7	10.1	2	8.8	1.1	2.2	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
FlgN	PF05130.7	gi|557694683|ref|YP_008797737.1|	-	1.1	9.4	5.5	1.5	9.0	3.8	1.4	1	1	0	1	1	1	0	FlgN	protein
HisKA_3	PF07730.8	gi|557694683|ref|YP_008797737.1|	-	1.3	9.3	6.1	18	5.7	1.1	3.0	1	1	1	2	2	2	0	Histidine	kinase
VASP_tetra	PF08776.6	gi|557694683|ref|YP_008797737.1|	-	1.4	8.3	0.1	1.4	8.3	0.0	3.5	3	2	0	3	3	3	0	VASP	tetramerisation	domain
DUF745	PF05335.8	gi|557694683|ref|YP_008797737.1|	-	1.7	8.1	8.5	1.9	7.9	5.9	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF745)
DUF2203	PF09969.4	gi|557694683|ref|YP_008797737.1|	-	2.1	8.5	5.1	4.8	7.4	3.5	1.7	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
Bac_small_YrzI	PF09501.5	gi|557694683|ref|YP_008797737.1|	-	2.3	8.1	6.9	21	5.1	0.1	3.2	3	0	0	3	3	3	0	Probable	sporulation	protein	(Bac_small_yrzI)
V-SNARE	PF05008.10	gi|557694683|ref|YP_008797737.1|	-	2.4	8.3	7.6	1	9.5	1.9	2.2	1	1	1	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
vATP-synt_AC39	PF01992.11	gi|557694684|ref|YP_008797738.1|	-	5.8e-39	134.1	3.3	7.1e-39	133.8	2.3	1.0	1	0	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
TusA	PF01206.12	gi|557694685|ref|YP_008797739.1|	-	5.8e-16	57.8	0.0	9.4e-16	57.1	0.0	1.4	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|557694685|ref|YP_008797739.1|	-	0.011	15.2	0.0	0.028	13.9	0.0	1.6	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2249)
IF-2	PF11987.3	gi|557694685|ref|YP_008797739.1|	-	0.12	12.2	0.0	0.2	11.5	0.0	1.3	1	0	0	1	1	1	0	Translation-initiation	factor	2
Sulf_transp	PF04143.9	gi|557694686|ref|YP_008797740.1|	-	1.5e-10	40.9	27.8	2.5e-06	27.3	3.9	4.1	4	0	0	4	4	4	2	Sulphur	transport
ApoL	PF05461.6	gi|557694686|ref|YP_008797740.1|	-	0.53	9.4	1.2	0.86	8.7	0.9	1.2	1	0	0	1	1	1	0	Apolipoprotein	L
DUF1464	PF07318.7	gi|557694687|ref|YP_008797741.1|	-	1.8e-106	355.8	0.2	2e-106	355.6	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
FGGY_C	PF02782.11	gi|557694687|ref|YP_008797741.1|	-	0.0021	17.6	0.1	0.0032	17.1	0.1	1.2	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
GHMP_kinases_C	PF08544.8	gi|557694688|ref|YP_008797742.1|	-	3.3e-06	27.2	0.1	9.4e-06	25.7	0.0	1.8	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.21	gi|557694688|ref|YP_008797742.1|	-	0.026	14.5	0.0	0.06	13.4	0.0	1.6	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
EGF_alliinase	PF04863.8	gi|557694688|ref|YP_008797742.1|	-	0.15	12.0	0.0	0.3	11.0	0.0	1.4	1	0	0	1	1	1	0	Alliinase	EGF-like	domain
DUF447	PF04289.7	gi|557694689|ref|YP_008797743.1|	-	4.7e-34	117.4	0.2	5.7e-34	117.1	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
HlyD_3	PF13437.1	gi|557694689|ref|YP_008797743.1|	-	0.016	15.5	0.0	0.026	14.8	0.0	1.3	1	0	0	1	1	1	0	HlyD	family	secretion	protein
Pyridox_oxidase	PF01243.15	gi|557694689|ref|YP_008797743.1|	-	0.033	14.2	0.0	0.073	13.0	0.0	1.5	1	0	0	1	1	1	0	Pyridoxamine	5'-phosphate	oxidase
2-oxoacid_dh	PF00198.18	gi|557694690|ref|YP_008797744.1|	-	6e-81	271.0	0.5	8.2e-81	270.6	0.3	1.1	1	0	0	1	1	1	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
Biotin_lipoyl	PF00364.17	gi|557694690|ref|YP_008797744.1|	-	3.4e-20	71.4	3.3	3.4e-20	71.4	2.3	2.2	2	0	0	2	2	2	1	Biotin-requiring	enzyme
E3_binding	PF02817.12	gi|557694690|ref|YP_008797744.1|	-	6.7e-18	64.0	0.9	6.7e-18	64.0	0.6	2.4	3	0	0	3	3	3	1	e3	binding	domain
Biotin_lipoyl_2	PF13533.1	gi|557694690|ref|YP_008797744.1|	-	1.5e-11	43.7	9.3	7.4e-07	28.7	0.2	3.5	2	1	1	3	3	3	3	Biotin-lipoyl	like
HlyD	PF00529.15	gi|557694690|ref|YP_008797744.1|	-	0.00099	18.5	7.4	0.013	14.7	0.1	3.2	3	0	0	3	3	3	2	HlyD	family	secretion	protein
RnfC_N	PF13375.1	gi|557694690|ref|YP_008797744.1|	-	0.0016	18.1	1.5	0.01	15.5	0.0	2.5	2	0	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
HlyD_3	PF13437.1	gi|557694690|ref|YP_008797744.1|	-	0.0022	18.3	0.4	0.086	13.1	0.0	2.7	1	1	1	2	2	2	1	HlyD	family	secretion	protein
GCV_H	PF01597.14	gi|557694690|ref|YP_008797744.1|	-	0.021	14.4	0.6	0.12	12.0	0.2	2.3	1	1	1	2	2	2	0	Glycine	cleavage	H-protein
HlyD_2	PF12700.2	gi|557694690|ref|YP_008797744.1|	-	0.065	12.3	0.6	8.9	5.3	0.0	2.7	1	1	2	3	3	3	0	HlyD	family	secretion	protein
MFS_1	PF07690.11	gi|557694691|ref|YP_008797745.1|	-	1.9e-31	109.0	61.8	3.3e-21	75.3	25.0	2.3	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
LacY_symp	PF01306.14	gi|557694691|ref|YP_008797745.1|	-	0.003	16.1	3.5	0.003	16.1	2.5	2.2	1	1	0	2	2	2	1	LacY	proton/sugar	symporter
Thioredox_DsbH	PF03190.10	gi|557694692|ref|YP_008797746.1|	-	9.3e-76	253.0	0.0	1.8e-75	252.1	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.1	gi|557694692|ref|YP_008797746.1|	-	2.4e-13	49.9	0.0	6.4e-13	48.5	0.0	1.8	1	0	0	1	1	1	1	Thioredoxin-like
Glyco_hydro_76	PF03663.9	gi|557694692|ref|YP_008797746.1|	-	2.9e-08	33.5	0.3	9.9e-07	28.4	0.2	2.6	2	1	0	2	2	2	1	Glycosyl	hydrolase	family	76
Glyco_hydro_88	PF07470.8	gi|557694692|ref|YP_008797746.1|	-	1.7e-06	27.3	0.0	0.00082	18.5	0.0	2.4	2	0	0	2	2	2	2	Glycosyl	Hydrolase	Family	88
Glyco_hydro_47	PF01532.15	gi|557694692|ref|YP_008797746.1|	-	4.1e-06	25.7	0.2	0.0013	17.4	0.0	3.0	2	1	1	3	3	3	1	Glycosyl	hydrolase	family	47
Thioredoxin_2	PF13098.1	gi|557694692|ref|YP_008797746.1|	-	0.0003	20.9	0.0	0.0008	19.5	0.0	1.7	1	0	0	1	1	1	1	Thioredoxin-like	domain
HTH_10	PF04967.7	gi|557694692|ref|YP_008797746.1|	-	0.00092	18.7	0.1	0.0021	17.6	0.0	1.6	1	0	0	1	1	1	1	HTH	DNA	binding	domain
GlcNAc_2-epim	PF07221.6	gi|557694692|ref|YP_008797746.1|	-	0.00093	18.2	0.0	0.1	11.5	0.0	3.0	3	0	0	3	3	3	1	N-acylglucosamine	2-epimerase	(GlcNAc	2-epimerase)
C5-epim_C	PF06662.8	gi|557694692|ref|YP_008797746.1|	-	0.0085	15.4	0.6	0.19	10.9	0.0	3.0	3	1	1	4	4	4	1	D-glucuronyl	C5-epimerase	C-terminus
DUF1680	PF07944.7	gi|557694692|ref|YP_008797746.1|	-	0.02	13.1	0.9	0.34	9.1	0.0	2.3	2	1	0	3	3	3	0	Putative	glycosyl	hydrolase	of	unknown	function	(DUF1680)
LANC_like	PF05147.8	gi|557694692|ref|YP_008797746.1|	-	0.044	12.3	0.0	3.2	6.2	0.0	2.4	2	0	0	2	2	2	0	Lanthionine	synthetase	C-like	protein
Pec_lyase	PF09492.5	gi|557694692|ref|YP_008797746.1|	-	0.11	11.6	0.0	0.32	10.1	0.0	1.7	2	0	0	2	2	2	0	Pectic	acid	lyase
tRNA-synt_1b	PF00579.20	gi|557694693|ref|YP_008797747.1|	-	5.1e-45	153.8	0.0	9.8e-44	149.6	0.0	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
Ribonuc_red_lgC	PF02867.10	gi|557694694|ref|YP_008797748.1|	-	9.4e-131	436.9	0.0	4.9e-111	371.9	0.0	2.4	2	1	0	2	2	2	2	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_2_N	PF08471.5	gi|557694694|ref|YP_008797748.1|	-	2.1e-37	127.0	0.0	1.6e-36	124.2	0.0	2.3	2	0	0	2	2	2	1	Class	II	vitamin	B12-dependent	ribonucleotide	reductase
TSCPD	PF12637.2	gi|557694694|ref|YP_008797748.1|	-	2.5e-19	68.9	0.0	5.2e-19	67.9	0.0	1.6	1	0	0	1	1	1	1	TSCPD	domain
RuvA_C	PF07499.8	gi|557694694|ref|YP_008797748.1|	-	0.042	14.0	0.0	0.66	10.1	0.0	2.9	3	0	0	3	3	3	0	RuvA,	C-terminal	domain
OrfB_Zn_ribbon	PF07282.6	gi|557694694|ref|YP_008797748.1|	-	0.069	12.8	1.4	0.23	11.1	1.0	1.9	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Oxidored_q1	PF00361.15	gi|557694695|ref|YP_008797749.1|	-	3.2e-67	226.6	18.6	3.2e-67	226.6	12.9	2.8	2	1	1	3	3	3	2	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
TP6A_N	PF04406.9	gi|557694696|ref|YP_008797750.1|	-	3.7e-15	55.3	0.1	7.7e-15	54.3	0.0	1.5	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DUF2399	PF09664.5	gi|557694696|ref|YP_008797750.1|	-	0.00017	21.4	0.0	0.00035	20.4	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	C-terminus	(DUF2399)
Metallophos_2	PF12850.2	gi|557694697|ref|YP_008797751.1|	-	3.9e-06	26.7	0.0	6.1e-06	26.1	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|557694697|ref|YP_008797751.1|	-	0.00014	21.3	0.2	0.0023	17.3	0.0	2.0	1	1	1	2	2	2	1	Calcineurin-like	phosphoesterase
SWIM	PF04434.12	gi|557694698|ref|YP_008797752.1|	-	8.7e-06	25.1	0.1	1.5e-05	24.3	0.1	1.3	1	0	0	1	1	1	1	SWIM	zinc	finger
Cupin_2	PF07883.6	gi|557694699|ref|YP_008797753.1|	-	1.5e-12	46.8	0.0	1.9e-12	46.4	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.17	gi|557694699|ref|YP_008797753.1|	-	1.2e-06	28.0	0.0	1.4e-06	27.7	0.0	1.1	1	0	0	1	1	1	1	Cupin
AraC_binding	PF02311.14	gi|557694699|ref|YP_008797753.1|	-	0.00018	21.2	0.0	0.00023	20.8	0.0	1.1	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
MannoseP_isomer	PF01050.13	gi|557694699|ref|YP_008797753.1|	-	0.0032	17.0	0.0	0.0038	16.8	0.0	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Cupin_3	PF05899.7	gi|557694699|ref|YP_008797753.1|	-	0.018	14.4	0.0	0.028	13.7	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF861)
Cupin_6	PF12852.2	gi|557694699|ref|YP_008797753.1|	-	0.019	14.5	0.0	0.022	14.3	0.0	1.1	1	0	0	1	1	1	0	Cupin
EutQ	PF06249.7	gi|557694699|ref|YP_008797753.1|	-	0.036	13.6	0.0	0.056	12.9	0.0	1.4	1	1	0	1	1	1	0	Ethanolamine	utilisation	protein	EutQ
Pirin	PF02678.11	gi|557694699|ref|YP_008797753.1|	-	0.039	13.8	0.0	0.045	13.6	0.0	1.1	1	0	0	1	1	1	0	Pirin
RNaseH_C	PF09293.5	gi|557694699|ref|YP_008797753.1|	-	0.043	13.7	0.0	0.058	13.2	0.0	1.2	1	0	0	1	1	1	0	T4	RNase	H,	C	terminal
ARD	PF03079.9	gi|557694699|ref|YP_008797753.1|	-	0.067	13.1	0.0	0.076	12.9	0.0	1.2	1	0	0	1	1	1	0	ARD/ARD'	family
Cupin_4	PF08007.7	gi|557694699|ref|YP_008797753.1|	-	0.073	12.2	0.0	0.082	12.1	0.0	1.2	1	0	0	1	1	1	0	Cupin	superfamily	protein
KduI	PF04962.7	gi|557694699|ref|YP_008797753.1|	-	0.092	11.7	0.0	0.11	11.5	0.0	1.1	1	0	0	1	1	1	0	KduI/IolB	family
2OG-FeII_Oxy_5	PF13759.1	gi|557694699|ref|YP_008797753.1|	-	0.094	13.0	0.0	5.5	7.3	0.0	2.1	1	1	0	2	2	2	0	Putative	2OG-Fe(II)	oxygenase
DUF1971	PF09313.6	gi|557694699|ref|YP_008797753.1|	-	0.11	12.2	0.0	0.16	11.6	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1971)
HAD_2	PF13419.1	gi|557694700|ref|YP_008797754.1|	-	4.2e-05	23.8	0.0	0.082	13.1	0.0	2.9	2	1	0	2	2	2	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|557694700|ref|YP_008797754.1|	-	0.0038	17.6	0.0	0.012	16.0	0.0	1.8	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|557694700|ref|YP_008797754.1|	-	0.041	13.7	0.0	0.18	11.6	0.0	2.1	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
GHMP_kinases_N	PF00288.21	gi|557694701|ref|YP_008797755.1|	-	2.4e-10	40.3	1.1	2.4e-10	40.3	0.8	2.0	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
Iso_dh	PF00180.15	gi|557694702|ref|YP_008797756.1|	-	1.3e-87	293.9	0.0	1.5e-87	293.7	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
EIIA-man	PF03610.11	gi|557694702|ref|YP_008797756.1|	-	0.1	12.6	0.1	0.26	11.3	0.0	1.7	2	0	0	2	2	2	0	PTS	system	fructose	IIA	component
Radical_SAM	PF04055.16	gi|557694703|ref|YP_008797757.1|	-	3.5e-09	37.0	0.1	5.5e-08	33.1	0.0	2.3	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|557694703|ref|YP_008797757.1|	-	7.9e-08	32.5	0.0	1.8e-07	31.3	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|557694703|ref|YP_008797757.1|	-	3e-07	30.4	1.7	3.2e-07	30.3	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Kazal_2	PF07648.10	gi|557694703|ref|YP_008797757.1|	-	0.058	13.3	4.0	1.6	8.7	0.1	2.6	2	0	0	2	2	2	0	Kazal-type	serine	protease	inhibitor	domain
Hemerythrin	PF01814.18	gi|557694705|ref|YP_008797759.1|	-	2e-18	66.7	0.1	2e-18	66.7	0.0	1.6	2	0	0	2	2	2	1	Hemerythrin	HHE	cation	binding	domain
HemY_N	PF07219.8	gi|557694705|ref|YP_008797759.1|	-	0.14	11.6	0.4	0.27	10.7	0.3	1.3	1	0	0	1	1	1	0	HemY	protein	N-terminus
Orai-1	PF07856.7	gi|557694706|ref|YP_008797760.1|	-	5.2	6.5	7.6	15	5.1	5.2	1.8	1	1	0	1	1	1	0	Mediator	of	CRAC	channel	activity
SBP_bac_5	PF00496.17	gi|557694707|ref|YP_008797761.1|	-	2.7e-28	98.8	2.1	2.4e-23	82.6	0.0	2.6	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
HsbA	PF12296.3	gi|557694707|ref|YP_008797761.1|	-	0.0097	15.7	1.5	0.018	14.8	1.0	1.6	1	1	0	1	1	1	1	Hydrophobic	surface	binding	protein	A
SF-assemblin	PF06705.6	gi|557694707|ref|YP_008797761.1|	-	0.022	13.9	0.3	0.066	12.3	0.1	1.8	2	0	0	2	2	2	0	SF-assemblin/beta	giardin
Baculo_PEP_C	PF04513.7	gi|557694707|ref|YP_008797761.1|	-	0.061	13.1	2.9	0.11	12.2	2.0	1.3	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
HR1	PF02185.11	gi|557694707|ref|YP_008797761.1|	-	1.2	8.9	2.4	0.71	9.6	0.0	1.8	2	0	0	2	2	2	0	Hr1	repeat
BPD_transp_1	PF00528.17	gi|557694708|ref|YP_008797762.1|	-	2.8e-25	88.9	13.6	2.8e-25	88.9	9.4	2.2	2	1	1	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|557694709|ref|YP_008797763.1|	-	1.9e-18	66.6	12.3	1.9e-18	66.6	8.5	2.0	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|557694710|ref|YP_008797764.1|	-	2.9e-26	92.3	0.0	3.9e-26	91.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|557694710|ref|YP_008797764.1|	-	4.4e-18	65.3	1.1	7.7e-18	64.6	0.7	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|557694710|ref|YP_008797764.1|	-	1.5e-12	48.0	0.2	1.8e-09	38.0	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694710|ref|YP_008797764.1|	-	8.8e-07	28.3	0.2	3.2e-06	26.5	0.1	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|557694710|ref|YP_008797764.1|	-	0.00016	21.1	0.0	0.00031	20.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|557694710|ref|YP_008797764.1|	-	0.0014	18.7	0.0	0.12	12.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|557694710|ref|YP_008797764.1|	-	0.0045	17.0	0.0	0.01	15.8	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
IstB_IS21	PF01695.12	gi|557694710|ref|YP_008797764.1|	-	0.0056	16.1	0.1	0.28	10.5	0.0	2.1	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
ABC_ATPase	PF09818.4	gi|557694710|ref|YP_008797764.1|	-	0.0092	14.6	0.0	0.017	13.7	0.0	1.4	1	0	0	1	1	1	1	Predicted	ATPase	of	the	ABC	class
SbcCD_C	PF13558.1	gi|557694710|ref|YP_008797764.1|	-	0.016	15.1	0.0	0.04	13.8	0.0	1.7	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_25	PF13481.1	gi|557694710|ref|YP_008797764.1|	-	0.023	14.1	0.0	0.57	9.5	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_5	PF07728.9	gi|557694710|ref|YP_008797764.1|	-	0.03	14.0	0.0	0.075	12.7	0.0	1.7	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Hpr_kinase_C	PF07475.7	gi|557694710|ref|YP_008797764.1|	-	0.049	12.9	0.1	0.09	12.0	0.1	1.5	1	0	0	1	1	1	0	HPr	Serine	kinase	C-terminal	domain
DUF258	PF03193.11	gi|557694710|ref|YP_008797764.1|	-	0.068	12.3	0.0	0.12	11.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_15	PF13175.1	gi|557694710|ref|YP_008797764.1|	-	0.069	12.1	0.1	0.57	9.1	0.0	1.9	2	0	0	2	2	2	0	AAA	ATPase	domain
Runt	PF00853.14	gi|557694710|ref|YP_008797764.1|	-	0.085	12.3	0.0	0.28	10.6	0.0	1.7	1	1	1	2	2	2	0	Runt	domain
AAA_10	PF12846.2	gi|557694710|ref|YP_008797764.1|	-	0.095	12.1	0.2	0.44	9.9	0.1	2.0	1	1	1	2	2	2	0	AAA-like	domain
Zeta_toxin	PF06414.7	gi|557694710|ref|YP_008797764.1|	-	0.14	11.2	0.0	0.32	10.0	0.0	1.5	1	1	0	1	1	1	0	Zeta	toxin
AIG1	PF04548.11	gi|557694710|ref|YP_008797764.1|	-	0.16	11.0	0.0	0.25	10.4	0.0	1.2	1	0	0	1	1	1	0	AIG1	family
ABC_tran	PF00005.22	gi|557694711|ref|YP_008797765.1|	-	1.3e-32	112.9	0.0	1.7e-32	112.6	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|557694711|ref|YP_008797765.1|	-	1.3e-20	73.4	0.3	2.1e-20	72.8	0.2	1.3	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|557694711|ref|YP_008797765.1|	-	1.7e-05	24.9	0.5	0.037	13.9	0.1	2.1	1	1	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|557694711|ref|YP_008797765.1|	-	0.0014	18.6	0.2	0.0026	17.7	0.1	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|557694711|ref|YP_008797765.1|	-	0.0037	16.5	0.0	0.017	14.3	0.0	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|557694711|ref|YP_008797765.1|	-	0.0048	16.3	0.1	0.0089	15.5	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|557694711|ref|YP_008797765.1|	-	0.0054	16.8	0.6	0.033	14.3	0.4	2.0	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|557694711|ref|YP_008797765.1|	-	0.0074	15.4	0.1	0.012	14.7	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|557694711|ref|YP_008797765.1|	-	0.022	15.0	0.1	0.037	14.3	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_13	PF13166.1	gi|557694711|ref|YP_008797765.1|	-	0.031	12.7	0.2	0.38	9.1	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.4	gi|557694711|ref|YP_008797765.1|	-	0.039	13.4	0.1	0.081	12.4	0.1	1.5	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
NACHT	PF05729.7	gi|557694711|ref|YP_008797765.1|	-	0.049	13.2	1.2	0.075	12.6	0.3	1.7	1	1	1	2	2	2	0	NACHT	domain
AAA	PF00004.24	gi|557694711|ref|YP_008797765.1|	-	0.055	13.6	0.3	0.11	12.7	0.2	1.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|557694711|ref|YP_008797765.1|	-	0.063	12.4	0.0	0.1	11.7	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
T2SE	PF00437.15	gi|557694711|ref|YP_008797765.1|	-	0.086	11.7	0.0	0.15	10.9	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
MMR_HSR1	PF01926.18	gi|557694711|ref|YP_008797765.1|	-	0.11	12.4	0.0	0.17	11.8	0.0	1.4	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_5	PF07728.9	gi|557694711|ref|YP_008797765.1|	-	0.11	12.1	0.3	0.25	11.0	0.2	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.12	gi|557694711|ref|YP_008797765.1|	-	0.14	11.5	0.1	0.26	10.6	0.1	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
MFS_1	PF07690.11	gi|557694712|ref|YP_008797766.1|	-	0.00076	18.2	0.8	0.00095	17.9	0.6	1.1	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
DUF1469	PF07332.6	gi|557694712|ref|YP_008797766.1|	-	0.099	12.3	1.0	0.17	11.6	0.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
RseC_MucC	PF04246.7	gi|557694712|ref|YP_008797766.1|	-	0.23	10.9	1.4	0.38	10.3	0.9	1.3	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
TnpW	PF14202.1	gi|557694712|ref|YP_008797766.1|	-	0.55	9.8	2.9	0.53	9.9	0.2	2.2	2	0	0	2	2	2	0	Transposon-encoded	protein	TnpW
Oxidored_q1	PF00361.15	gi|557694713|ref|YP_008797767.1|	-	5.9e-72	242.1	21.3	5.9e-72	242.1	14.7	2.5	2	1	0	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|557694713|ref|YP_008797767.1|	-	2.2e-08	33.5	3.3	3.7e-08	32.7	0.2	2.7	2	0	0	2	2	2	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
V4R	PF02830.13	gi|557694714|ref|YP_008797768.1|	-	1e-07	31.6	2.5	1.5e-06	27.9	1.5	2.4	2	0	0	2	2	2	1	V4R	domain
Oxidored_q1	PF00361.15	gi|557694715|ref|YP_008797769.1|	-	5.9e-82	274.9	15.1	5.9e-82	274.9	10.5	2.7	3	0	0	3	3	3	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|557694715|ref|YP_008797769.1|	-	8.7e-13	47.6	0.1	3.3e-12	45.7	0.0	2.1	1	0	0	1	1	1	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q1_C	PF01010.14	gi|557694715|ref|YP_008797769.1|	-	4.9e-06	26.2	2.2	0.0096	15.4	0.0	2.5	2	0	0	2	2	2	2	NADH-Ubiquinone	oxidoreductase	(complex	I)	subunit	C-terminus
NADH5_C	PF06455.6	gi|557694715|ref|YP_008797769.1|	-	0.00049	19.5	4.2	0.0006	19.2	0.0	3.2	3	0	0	3	3	3	1	NADH	dehydrogenase	subunit	5	C-terminus
CutA1	PF03091.10	gi|557694716|ref|YP_008797770.1|	-	1.7e-22	79.0	0.0	1.8e-22	78.8	0.0	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
DUF309	PF03745.9	gi|557694717|ref|YP_008797771.1|	-	6.2e-22	76.8	0.0	9.7e-22	76.1	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF309)
Pneumo_ncap	PF03246.8	gi|557694717|ref|YP_008797771.1|	-	0.017	13.7	0.0	0.017	13.7	0.0	1.1	1	0	0	1	1	1	0	Pneumovirus	nucleocapsid	protein
NTP_transferase	PF00483.18	gi|557694717|ref|YP_008797771.1|	-	0.042	13.1	0.0	0.052	12.8	0.0	1.2	1	0	0	1	1	1	0	Nucleotidyl	transferase
Rapamycin_bind	PF08771.6	gi|557694717|ref|YP_008797771.1|	-	0.065	13.3	0.0	0.23	11.5	0.0	1.9	1	1	1	2	2	2	0	Rapamycin	binding	domain
RPA_C	PF08784.6	gi|557694717|ref|YP_008797771.1|	-	0.16	12.4	0.0	3.4	8.1	0.0	2.1	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
ECF-ribofla_trS	PF07155.7	gi|557694718|ref|YP_008797772.1|	-	1.6e-28	99.5	20.4	1.4e-20	73.6	10.6	2.0	1	1	1	2	2	2	2	ECF-type	riboflavin	transporter,	S	component
5TM-5TMR_LYT	PF07694.7	gi|557694718|ref|YP_008797772.1|	-	0.00026	20.3	24.5	0.00078	18.8	6.7	2.3	1	1	1	2	2	2	2	5TMR	of	5TMR-LYT
Caveolin	PF01146.12	gi|557694718|ref|YP_008797772.1|	-	0.19	11.2	1.9	0.15	11.6	0.2	1.6	2	0	0	2	2	2	0	Caveolin
ABC_tran	PF00005.22	gi|557694719|ref|YP_008797773.1|	-	5.1e-21	75.4	0.0	6.4e-21	75.0	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.14	gi|557694719|ref|YP_008797773.1|	-	1.2e-07	31.2	0.4	0.003	16.8	0.0	2.4	2	1	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|557694719|ref|YP_008797773.1|	-	0.00028	20.3	0.1	0.00055	19.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_21	PF13304.1	gi|557694719|ref|YP_008797773.1|	-	0.00036	20.5	0.3	0.0039	17.2	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|557694719|ref|YP_008797773.1|	-	0.0032	16.8	0.0	0.0059	16.0	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|557694719|ref|YP_008797773.1|	-	0.0045	17.7	0.1	0.015	16.0	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|557694719|ref|YP_008797773.1|	-	0.0058	15.8	0.1	0.014	14.5	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_33	PF13671.1	gi|557694719|ref|YP_008797773.1|	-	0.011	15.5	0.0	0.016	15.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MutS_V	PF00488.16	gi|557694719|ref|YP_008797773.1|	-	0.022	14.1	0.3	3.5	6.9	0.0	2.1	2	0	0	2	2	2	0	MutS	domain	V
AAA_23	PF13476.1	gi|557694719|ref|YP_008797773.1|	-	0.032	14.5	0.2	0.083	13.1	0.1	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_PrkA	PF08298.6	gi|557694719|ref|YP_008797773.1|	-	0.055	12.1	0.0	0.089	11.4	0.0	1.3	1	0	0	1	1	1	0	PrkA	AAA	domain
AAA_5	PF07728.9	gi|557694719|ref|YP_008797773.1|	-	0.084	12.5	0.0	5.7	6.6	0.0	2.8	3	0	0	3	3	3	0	AAA	domain	(dynein-related	subfamily)
Glyco_trans_4_2	PF13477.1	gi|557694719|ref|YP_008797773.1|	-	0.095	12.5	0.0	0.17	11.7	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	4-like
AAA_13	PF13166.1	gi|557694719|ref|YP_008797773.1|	-	0.16	10.3	0.0	0.22	9.9	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
Lactamase_B_2	PF12706.2	gi|557694720|ref|YP_008797774.1|	-	1.3e-14	54.1	0.5	5.2e-11	42.4	0.0	2.2	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|557694720|ref|YP_008797774.1|	-	5e-10	39.0	0.2	2.5e-09	36.8	0.1	2.2	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B	PF00753.22	gi|557694720|ref|YP_008797774.1|	-	4.1e-08	33.0	0.6	1.1e-07	31.7	0.4	1.7	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|557694720|ref|YP_008797774.1|	-	0.001	18.8	0.2	0.1	12.3	0.0	2.3	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
AIM24	PF01987.12	gi|557694721|ref|YP_008797775.1|	-	4.6e-56	189.6	0.0	5.2e-56	189.4	0.0	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
tRNA-synt_1d	PF00750.14	gi|557694722|ref|YP_008797776.1|	-	8.7e-38	130.0	0.0	8.6e-29	100.4	0.0	2.2	1	1	1	2	2	2	2	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|557694722|ref|YP_008797776.1|	-	7e-25	87.3	0.2	2.1e-24	85.7	0.0	2.0	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.11	gi|557694722|ref|YP_008797776.1|	-	4.6e-15	55.9	0.0	1.7e-14	54.1	0.0	2.0	1	0	0	1	1	1	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1e	PF01406.14	gi|557694722|ref|YP_008797776.1|	-	0.0027	16.8	0.0	0.0049	16.0	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|557694722|ref|YP_008797776.1|	-	0.015	13.9	0.2	0.058	12.0	0.0	2.0	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|557694722|ref|YP_008797776.1|	-	0.051	11.5	0.0	0.11	10.4	0.0	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DUF420	PF04238.7	gi|557694723|ref|YP_008797777.1|	-	1.4e-34	118.9	4.4	1.4e-34	118.9	3.0	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF420)
DUF2306	PF10067.4	gi|557694723|ref|YP_008797777.1|	-	0.00031	20.8	0.9	0.00031	20.8	0.6	3.0	3	1	1	4	4	4	1	Predicted	membrane	protein	(DUF2306)
DUF1240	PF06836.7	gi|557694723|ref|YP_008797777.1|	-	0.19	11.9	0.8	1.3	9.2	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1240)
TGS	PF02824.16	gi|557694724|ref|YP_008797778.1|	-	1.9e-19	69.2	0.3	9.7e-19	66.9	0.3	2.0	2	0	0	2	2	2	1	TGS	domain
MMR_HSR1	PF01926.18	gi|557694724|ref|YP_008797778.1|	-	1.8e-11	43.9	0.0	4.9e-11	42.5	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|557694724|ref|YP_008797778.1|	-	3.8e-06	26.2	0.0	3.6e-05	23.0	0.0	2.1	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
AAA_22	PF13401.1	gi|557694724|ref|YP_008797778.1|	-	0.00033	20.8	0.4	0.053	13.6	0.0	3.1	2	1	3	5	5	5	1	AAA	domain
G-alpha	PF00503.15	gi|557694724|ref|YP_008797778.1|	-	0.0016	17.2	0.1	0.0016	17.2	0.0	1.1	1	0	0	1	1	1	1	G-protein	alpha	subunit
Miro	PF08477.8	gi|557694724|ref|YP_008797778.1|	-	0.051	14.0	0.0	0.62	10.5	0.0	2.6	1	1	1	2	2	2	0	Miro-like	protein
ABC_tran	PF00005.22	gi|557694724|ref|YP_008797778.1|	-	0.053	13.8	1.6	1.1	9.4	0.1	2.5	1	1	1	2	2	2	0	ABC	transporter
Dynamin_N	PF00350.18	gi|557694724|ref|YP_008797778.1|	-	0.084	12.6	0.0	0.56	10.0	0.0	2.3	2	0	0	2	2	2	0	Dynamin	family
ATP-synt_F	PF01990.12	gi|557694725|ref|YP_008797779.1|	-	9.1e-15	54.8	0.0	9.4e-15	54.7	0.0	1.0	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
DUF162	PF02589.10	gi|557694725|ref|YP_008797779.1|	-	0.036	13.5	0.0	0.036	13.5	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	ACR,	YkgG	family	COG1556
vATP-synt_E	PF01991.13	gi|557694726|ref|YP_008797780.1|	-	6e-15	55.0	11.1	7e-15	54.8	7.7	1.0	1	0	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
NUC173	PF08161.7	gi|557694726|ref|YP_008797780.1|	-	0.0078	15.5	3.1	1.3	8.3	0.1	2.4	1	1	1	2	2	2	2	NUC173	domain
mIF3	PF14877.1	gi|557694726|ref|YP_008797780.1|	-	0.026	13.8	3.1	0.034	13.5	1.3	1.9	1	1	1	2	2	2	0	Mitochondrial	translation	initiation	factor
ZYG-11_interact	PF05884.7	gi|557694726|ref|YP_008797780.1|	-	0.12	11.4	0.7	0.16	11.0	0.5	1.1	1	0	0	1	1	1	0	Interactor	of	ZYG-11
DUF1890	PF09001.6	gi|557694726|ref|YP_008797780.1|	-	0.17	11.8	1.9	0.97	9.4	0.0	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1890)
ClpB_D2-small	PF10431.4	gi|557694726|ref|YP_008797780.1|	-	0.21	11.5	2.8	7	6.6	0.1	3.5	2	2	1	3	3	3	0	C-terminal,	D2-small	domain,	of	ClpB	protein
Tht1	PF04163.7	gi|557694726|ref|YP_008797780.1|	-	0.28	9.5	2.3	0.34	9.2	1.6	1.1	1	0	0	1	1	1	0	Tht1-like	nuclear	fusion	protein
PNPase	PF03726.9	gi|557694726|ref|YP_008797780.1|	-	8.8	6.6	11.5	62	3.9	5.9	2.7	2	1	0	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
SurE	PF01975.12	gi|557694727|ref|YP_008797781.1|	-	6.2e-56	188.8	0.0	7.8e-56	188.5	0.0	1.1	1	0	0	1	1	1	1	Survival	protein	SurE
HTH_AsnC-type	PF13404.1	gi|557694729|ref|YP_008797783.1|	-	1.4e-16	59.7	0.3	2.3e-16	59.0	0.2	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|557694729|ref|YP_008797783.1|	-	1e-15	57.1	0.7	1.5e-15	56.6	0.1	1.6	2	0	0	2	2	2	1	AsnC	family
HTH_24	PF13412.1	gi|557694729|ref|YP_008797783.1|	-	1.9e-15	55.9	0.2	3.5e-15	55.1	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Sigma70_r4	PF04545.11	gi|557694729|ref|YP_008797783.1|	-	1.2e-06	27.7	0.1	2.2e-06	26.8	0.1	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_Tnp_ISL3	PF13542.1	gi|557694729|ref|YP_008797783.1|	-	0.0003	19.8	0.0	0.00051	19.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
TrmB	PF01978.14	gi|557694729|ref|YP_008797783.1|	-	0.00079	19.0	2.0	0.011	15.3	0.1	2.7	2	1	1	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|557694729|ref|YP_008797783.1|	-	0.0024	17.4	0.0	0.0046	16.6	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|557694729|ref|YP_008797783.1|	-	0.0045	16.6	0.0	0.0097	15.5	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_IclR	PF09339.5	gi|557694729|ref|YP_008797783.1|	-	0.0063	16.0	0.0	0.011	15.3	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|557694729|ref|YP_008797783.1|	-	0.0074	16.0	0.0	0.015	15.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|557694729|ref|YP_008797783.1|	-	0.0076	15.8	0.0	0.014	15.0	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_23	PF13384.1	gi|557694729|ref|YP_008797783.1|	-	0.016	14.8	0.0	0.031	13.9	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
ACT_4	PF13291.1	gi|557694729|ref|YP_008797783.1|	-	0.019	15.2	0.2	0.088	13.1	0.1	2.1	1	1	0	1	1	1	0	ACT	domain
HTH_Mga	PF08280.6	gi|557694729|ref|YP_008797783.1|	-	0.021	14.5	0.0	0.064	13.0	0.0	1.8	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Sigma70_r4_2	PF08281.7	gi|557694729|ref|YP_008797783.1|	-	0.032	13.7	0.1	0.1	12.0	0.1	1.9	1	1	0	1	1	1	0	Sigma-70,	region	4
HTH_DeoR	PF08220.7	gi|557694729|ref|YP_008797783.1|	-	0.043	13.3	0.0	0.085	12.4	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_1	PF00126.22	gi|557694729|ref|YP_008797783.1|	-	0.043	13.5	0.0	0.099	12.3	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
DDRGK	PF09756.4	gi|557694729|ref|YP_008797783.1|	-	0.045	13.1	0.2	0.095	12.1	0.1	1.6	2	0	0	2	2	2	0	DDRGK	domain
DUF4582	PF15189.1	gi|557694729|ref|YP_008797783.1|	-	0.046	12.9	0.1	0.12	11.5	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4582)
DUF977	PF06163.6	gi|557694729|ref|YP_008797783.1|	-	0.054	13.2	0.6	0.14	11.9	0.1	1.8	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF977)
FaeA	PF04703.7	gi|557694729|ref|YP_008797783.1|	-	0.084	13.0	0.0	2.5	8.3	0.0	2.3	2	0	0	2	2	2	0	FaeA-like	protein
MarR	PF01047.17	gi|557694729|ref|YP_008797783.1|	-	0.1	12.2	0.1	0.4	10.4	0.0	1.9	2	0	0	2	2	2	0	MarR	family
GYD	PF08734.6	gi|557694729|ref|YP_008797783.1|	-	0.11	12.2	0.0	0.42	10.3	0.0	1.9	2	0	0	2	2	2	0	GYD	domain
Phage_NinH	PF06322.6	gi|557694729|ref|YP_008797783.1|	-	0.12	12.0	0.0	0.23	11.0	0.0	1.5	1	0	0	1	1	1	0	Phage	NinH	protein
DUF2805	PF10985.3	gi|557694729|ref|YP_008797783.1|	-	0.12	12.3	0.3	0.39	10.6	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2805)
CoA_binding	PF02629.14	gi|557694729|ref|YP_008797783.1|	-	0.2	12.1	1.2	1.1	9.8	0.7	2.1	1	1	1	2	2	2	0	CoA	binding	domain
Semialdhyde_dh	PF01118.19	gi|557694730|ref|YP_008797784.1|	-	8.2e-34	116.5	0.0	1.3e-33	115.8	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|557694730|ref|YP_008797784.1|	-	2.8e-12	46.8	0.0	5e-12	46.0	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
GFO_IDH_MocA	PF01408.17	gi|557694730|ref|YP_008797784.1|	-	0.0016	18.9	0.0	0.0034	17.8	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
AA_kinase	PF00696.23	gi|557694731|ref|YP_008797785.1|	-	2e-32	112.6	6.3	2.3e-32	112.4	4.3	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
GerE	PF00196.14	gi|557694731|ref|YP_008797785.1|	-	0.083	12.2	0.0	0.17	11.2	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
RNA_pol_Rpb2_6	PF00562.23	gi|557694731|ref|YP_008797785.1|	-	0.11	11.2	0.0	0.15	10.7	0.0	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	6
Lar_restr_allev	PF14354.1	gi|557694732|ref|YP_008797786.1|	-	0.0023	18.1	1.8	0.0041	17.4	1.2	1.4	1	1	0	1	1	1	1	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.7	gi|557694732|ref|YP_008797786.1|	-	0.0024	17.1	2.9	0.0046	16.2	2.0	1.5	1	1	0	1	1	1	1	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.6	gi|557694732|ref|YP_008797786.1|	-	0.003	17.1	0.2	0.0054	16.3	0.1	1.4	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Nudix_N_2	PF14803.1	gi|557694732|ref|YP_008797786.1|	-	0.0097	15.5	1.1	3	7.5	0.2	2.2	2	0	0	2	2	2	2	Nudix	N-terminal
DNA_ligase_ZBD	PF03119.11	gi|557694732|ref|YP_008797786.1|	-	0.011	15.4	3.1	0.11	12.1	0.6	2.4	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-IS66	PF13005.2	gi|557694732|ref|YP_008797786.1|	-	0.014	15.3	2.5	1.8	8.6	0.1	2.3	2	1	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Zn-ribbon_8	PF09723.5	gi|557694732|ref|YP_008797786.1|	-	0.015	15.2	1.5	2.8	7.9	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
Cys_rich_CPXG	PF14255.1	gi|557694732|ref|YP_008797786.1|	-	0.018	14.8	0.3	5.1	7.0	0.0	2.1	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
DUF3133	PF11331.3	gi|557694732|ref|YP_008797786.1|	-	0.025	14.1	0.2	0.034	13.7	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3133)
Zn_Tnp_IS1595	PF12760.2	gi|557694732|ref|YP_008797786.1|	-	0.031	14.0	0.2	0.068	12.9	0.1	1.6	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
DZR	PF12773.2	gi|557694732|ref|YP_008797786.1|	-	0.066	13.0	0.8	0.26	11.1	0.5	1.9	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|557694732|ref|YP_008797786.1|	-	0.081	12.1	2.1	2.7	7.3	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|557694732|ref|YP_008797786.1|	-	0.085	12.3	0.5	6.3	6.3	0.1	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Elf1	PF05129.8	gi|557694732|ref|YP_008797786.1|	-	0.092	12.4	0.1	0.21	11.2	0.1	1.5	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
zinc_ribbon_5	PF13719.1	gi|557694732|ref|YP_008797786.1|	-	0.1	12.1	0.2	0.44	10.1	0.1	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|557694732|ref|YP_008797786.1|	-	0.11	12.2	0.1	0.28	10.9	0.1	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
RRN7	PF11781.3	gi|557694732|ref|YP_008797786.1|	-	0.15	11.5	1.6	5.2	6.6	0.1	2.2	2	0	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Prim_Zn_Ribbon	PF08273.7	gi|557694732|ref|YP_008797786.1|	-	0.16	12.0	2.0	0.63	10.1	0.5	2.0	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
zf-HYPF	PF07503.7	gi|557694732|ref|YP_008797786.1|	-	0.17	11.3	0.7	4.9	6.6	0.1	2.1	2	0	0	2	2	2	0	HypF	finger
zf-C2H2_6	PF13912.1	gi|557694732|ref|YP_008797786.1|	-	0.18	11.7	1.2	1.5	8.8	0.1	2.1	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-TFIIB	PF13453.1	gi|557694732|ref|YP_008797786.1|	-	0.19	10.9	1.3	0.35	10.1	0.9	1.4	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
zinc_ribbon_2	PF13240.1	gi|557694732|ref|YP_008797786.1|	-	0.27	10.7	2.8	4	7.0	1.9	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
Rubredoxin	PF00301.15	gi|557694732|ref|YP_008797786.1|	-	1.1	9.2	5.9	3.4	7.6	0.1	2.5	2	1	1	3	3	3	0	Rubredoxin
Desulfoferrod_N	PF06397.7	gi|557694732|ref|YP_008797786.1|	-	1.1	8.7	3.6	1.5	8.2	0.8	2.0	1	1	1	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
FeS	PF04060.8	gi|557694732|ref|YP_008797786.1|	-	1.4	8.5	4.3	9.1	5.9	0.2	2.2	2	0	0	2	2	2	0	Putative	Fe-S	cluster
RimK	PF08443.6	gi|557694733|ref|YP_008797787.1|	-	3.3e-42	144.1	0.0	4.6e-42	143.6	0.0	1.2	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|557694733|ref|YP_008797787.1|	-	2e-13	50.5	0.0	3.3e-13	49.7	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|557694733|ref|YP_008797787.1|	-	1.9e-07	30.3	0.0	2.8e-07	29.8	0.0	1.2	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|557694733|ref|YP_008797787.1|	-	5.3e-06	25.3	0.0	7.8e-06	24.8	0.0	1.4	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
CPSase_L_D2	PF02786.12	gi|557694733|ref|YP_008797787.1|	-	5.1e-05	22.6	0.0	0.00023	20.4	0.0	1.9	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_5	PF13549.1	gi|557694733|ref|YP_008797787.1|	-	0.00037	19.7	0.0	0.00067	18.9	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|557694733|ref|YP_008797787.1|	-	0.00041	20.2	0.1	0.0032	17.3	0.1	2.3	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|557694733|ref|YP_008797787.1|	-	0.00055	19.3	0.0	0.0012	18.2	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
Aminotran_3	PF00202.16	gi|557694734|ref|YP_008797788.1|	-	1.5e-98	329.7	0.0	1.8e-98	329.5	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|557694734|ref|YP_008797788.1|	-	0.0004	19.4	0.0	0.0005	19.1	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|557694734|ref|YP_008797788.1|	-	0.004	15.9	0.0	0.0067	15.2	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
cobW	PF02492.14	gi|557694735|ref|YP_008797789.1|	-	7.4e-08	32.0	0.2	3.7e-07	29.7	0.1	2.0	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|557694735|ref|YP_008797789.1|	-	0.00055	19.6	0.2	0.0017	18.0	0.1	1.9	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CbiA	PF01656.18	gi|557694735|ref|YP_008797789.1|	-	0.00066	19.1	0.2	0.0019	17.6	0.1	1.8	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Thymidylate_kin	PF02223.12	gi|557694735|ref|YP_008797789.1|	-	0.0052	16.1	0.0	0.01	15.1	0.0	1.5	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_26	PF13500.1	gi|557694735|ref|YP_008797789.1|	-	0.0053	16.3	0.0	0.011	15.3	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|557694735|ref|YP_008797789.1|	-	0.02	15.2	0.0	0.039	14.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|557694735|ref|YP_008797789.1|	-	0.038	14.8	0.0	0.069	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|557694735|ref|YP_008797789.1|	-	0.048	13.2	1.5	0.2	11.2	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
PRK	PF00485.13	gi|557694735|ref|YP_008797789.1|	-	0.056	12.9	0.0	0.16	11.5	0.0	1.7	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
LpxK	PF02606.9	gi|557694735|ref|YP_008797789.1|	-	0.087	11.7	1.3	0.3	9.9	0.9	2.0	1	1	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
ArgK	PF03308.11	gi|557694735|ref|YP_008797789.1|	-	0.2	10.3	4.6	0.16	10.7	0.2	2.2	2	1	0	2	2	2	0	ArgK	protein
Peptidase_M20	PF01546.23	gi|557694736|ref|YP_008797790.1|	-	1.7e-25	89.6	0.1	2e-25	89.3	0.1	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|557694736|ref|YP_008797790.1|	-	2.4e-12	46.6	0.0	4.3e-12	45.7	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|557694736|ref|YP_008797790.1|	-	0.0028	17.4	0.1	0.004	16.9	0.1	1.3	1	0	0	1	1	1	1	Peptidase	family	M28
Lyase_1	PF00206.15	gi|557694737|ref|YP_008797791.1|	-	1.1e-43	149.6	1.4	2.8e-43	148.2	0.3	2.0	2	0	0	2	2	2	1	Lyase
ASL_C2	PF14698.1	gi|557694737|ref|YP_008797791.1|	-	0.0015	18.5	0.1	0.0045	17.0	0.0	1.9	1	0	0	1	1	1	1	Argininosuccinate	lyase	C-terminal
Arginosuc_synth	PF00764.14	gi|557694738|ref|YP_008797792.1|	-	4.9e-155	516.3	0.0	5.7e-155	516.1	0.0	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
QueC	PF06508.8	gi|557694738|ref|YP_008797792.1|	-	0.00079	18.7	0.1	0.0013	18.0	0.0	1.4	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.16	gi|557694738|ref|YP_008797792.1|	-	0.0012	18.4	0.1	0.0016	17.9	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
PAPS_reduct	PF01507.14	gi|557694738|ref|YP_008797792.1|	-	0.039	13.7	0.0	0.1	12.4	0.0	1.7	1	1	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
Phage_BR0599	PF09356.5	gi|557694738|ref|YP_008797792.1|	-	0.11	12.6	0.0	0.29	11.3	0.0	1.7	1	0	0	1	1	1	0	Phage	conserved	hypothetical	protein	BR0599
ATP_bind_3	PF01171.15	gi|557694738|ref|YP_008797792.1|	-	0.13	11.7	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	PP-loop	family
dsDNA_bind	PF01984.15	gi|557694740|ref|YP_008797794.1|	-	4.5e-26	90.9	11.4	5.8e-26	90.5	7.9	1.1	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
Ebp2	PF05890.7	gi|557694740|ref|YP_008797794.1|	-	0.0069	15.7	2.9	0.0069	15.7	2.0	1.2	1	0	0	1	1	1	1	Eukaryotic	rRNA	processing	protein	EBP2
SASP	PF00269.15	gi|557694740|ref|YP_008797794.1|	-	0.034	14.0	0.0	0.069	13.0	0.0	1.5	1	0	0	1	1	1	0	Small,	acid-soluble	spore	proteins,	alpha/beta	type
EF-1_beta_acid	PF10587.4	gi|557694740|ref|YP_008797794.1|	-	0.038	14.1	2.8	0.038	14.1	1.9	2.6	2	0	0	2	2	2	0	Eukaryotic	elongation	factor	1	beta	central	acidic	region
PELOTA_1	PF15608.1	gi|557694740|ref|YP_008797794.1|	-	0.047	13.4	0.2	0.052	13.3	0.2	1.3	1	0	0	1	1	1	0	PELOTA	RNA	binding	domain
DUF1454	PF07305.7	gi|557694740|ref|YP_008797794.1|	-	0.089	11.8	0.6	0.11	11.6	0.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1454)
DUF2126	PF09899.4	gi|557694740|ref|YP_008797794.1|	-	0.11	10.5	1.1	0.11	10.5	0.8	1.0	1	0	0	1	1	1	0	Putative	amidoligase	enzyme	(DUF2126)
SDA1	PF05285.7	gi|557694740|ref|YP_008797794.1|	-	0.65	9.2	5.9	0.73	9.0	4.1	1.0	1	0	0	1	1	1	0	SDA1
PAC2	PF09754.4	gi|557694741|ref|YP_008797795.1|	-	9.1e-32	110.6	0.0	1.1e-31	110.3	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
TGT	PF01702.13	gi|557694742|ref|YP_008797796.1|	-	2.8e-46	157.7	0.0	4.3e-46	157.1	0.0	1.3	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
Acylphosphatase	PF00708.13	gi|557694743|ref|YP_008797797.1|	-	5e-27	93.8	0.2	1.2e-26	92.5	0.2	1.7	1	0	0	1	1	1	1	Acylphosphatase
PMC2NT	PF08066.7	gi|557694743|ref|YP_008797797.1|	-	0.17	12.2	16.8	0.41	10.9	2.7	4.4	1	1	3	4	4	4	0	PMC2NT	(NUC016)	domain
Hint_2	PF13403.1	gi|557694743|ref|YP_008797797.1|	-	2.2	8.1	5.9	15	5.4	2.1	2.8	1	1	1	2	2	2	0	Hint	domain
DUF1628	PF07790.6	gi|557694745|ref|YP_008797799.1|	-	1e-05	26.1	4.4	2.5e-05	24.9	2.4	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1628)
ACP_syn_III	PF08545.5	gi|557694745|ref|YP_008797799.1|	-	0.67	9.6	2.9	0.55	9.9	0.9	1.6	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
RskA	PF10099.4	gi|557694745|ref|YP_008797799.1|	-	2.1	8.0	7.0	0.34	10.6	2.3	1.6	2	0	0	2	2	2	0	Anti-sigma-K	factor	rskA
T2SF	PF00482.18	gi|557694746|ref|YP_008797800.1|	-	0.082	12.8	0.1	0.082	12.8	0.0	3.3	3	1	0	3	3	3	0	Type	II	secretion	system	(T2SS),	protein	F
DZR	PF12773.2	gi|557694747|ref|YP_008797801.1|	-	1.6e-06	27.7	13.3	0.0013	18.4	3.9	2.8	1	1	1	2	2	2	2	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|557694747|ref|YP_008797801.1|	-	0.0012	18.1	2.5	0.0012	18.1	1.7	3.7	3	1	0	3	3	3	1	TFIIB	zinc-binding
HypA	PF01155.14	gi|557694747|ref|YP_008797801.1|	-	0.0016	18.0	10.7	0.031	13.9	0.6	3.2	1	1	1	2	2	2	1	Hydrogenase	expression/synthesis	hypA	family
OrfB_Zn_ribbon	PF07282.6	gi|557694747|ref|YP_008797801.1|	-	0.0017	17.9	0.9	0.0017	17.9	0.6	3.9	3	2	2	5	5	5	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|557694747|ref|YP_008797801.1|	-	0.0029	16.7	21.3	0.074	12.2	0.3	3.8	3	2	0	3	3	3	2	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|557694747|ref|YP_008797801.1|	-	0.0044	16.6	0.5	0.0044	16.6	0.4	4.1	4	1	0	4	4	4	1	Nudix	N-terminal
Y1_Tnp	PF01797.11	gi|557694747|ref|YP_008797801.1|	-	0.0063	16.3	0.0	0.011	15.6	0.0	1.4	1	0	0	1	1	1	1	Transposase	IS200	like
zf-TFIIB	PF13453.1	gi|557694747|ref|YP_008797801.1|	-	0.012	14.8	0.4	0.012	14.8	0.3	2.7	3	0	0	3	3	2	0	Transcription	factor	zinc-finger
DUF1451	PF07295.6	gi|557694747|ref|YP_008797801.1|	-	0.012	15.3	0.8	0.012	15.3	0.5	3.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1451)
Zn-ribbon_8	PF09723.5	gi|557694747|ref|YP_008797801.1|	-	0.029	14.3	15.2	3.4	7.6	0.1	4.5	3	2	1	4	4	4	0	Zinc	ribbon	domain
zinc-ribbons_6	PF07191.7	gi|557694747|ref|YP_008797801.1|	-	0.035	13.8	9.6	0.1	12.3	1.5	2.3	2	0	0	2	2	2	0	zinc-ribbons
Zn_Tnp_IS1595	PF12760.2	gi|557694747|ref|YP_008797801.1|	-	0.044	13.6	0.9	0.044	13.6	0.6	3.8	2	2	1	4	4	4	0	Transposase	zinc-ribbon	domain
Ribosomal_L37e	PF01907.14	gi|557694747|ref|YP_008797801.1|	-	0.077	12.7	11.1	0.35	10.7	0.9	2.9	3	0	0	3	3	3	0	Ribosomal	protein	L37e
DUF35_N	PF12172.3	gi|557694747|ref|YP_008797801.1|	-	0.077	12.9	6.9	1.2	9.1	0.4	3.4	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Rtf2	PF04641.7	gi|557694747|ref|YP_008797801.1|	-	0.15	11.1	3.1	0.28	10.3	1.7	1.7	1	1	0	1	1	1	0	Rtf2	RING-finger
RNA_POL_M_15KD	PF02150.11	gi|557694747|ref|YP_008797801.1|	-	0.2	11.3	0.2	0.2	11.3	0.2	3.7	3	1	1	4	4	4	0	RNA	polymerases	M/15	Kd	subunit
zinc_ribbon_2	PF13240.1	gi|557694747|ref|YP_008797801.1|	-	0.39	10.2	22.9	0.74	9.3	0.8	5.8	4	2	3	7	7	7	0	zinc-ribbon	domain
zf-CCHC_5	PF14787.1	gi|557694747|ref|YP_008797801.1|	-	0.65	9.5	4.8	1	8.9	0.1	2.4	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
DUF2318	PF10080.4	gi|557694747|ref|YP_008797801.1|	-	0.88	9.3	10.8	0.089	12.5	1.8	2.4	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2318)
LIM	PF00412.17	gi|557694747|ref|YP_008797801.1|	-	0.96	9.5	10.1	0.29	11.2	0.6	3.3	3	1	0	3	3	3	0	LIM	domain
zf-C2H2	PF00096.21	gi|557694747|ref|YP_008797801.1|	-	1	9.8	0.1	1	9.8	0.0	4.2	4	1	0	4	4	4	0	Zinc	finger,	C2H2	type
NRDD	PF13597.1	gi|557694747|ref|YP_008797801.1|	-	1.6	6.7	4.8	0.36	8.8	0.0	2.2	3	0	0	3	3	3	0	Anaerobic	ribonucleoside-triphosphate	reductase
PHF5	PF03660.9	gi|557694747|ref|YP_008797801.1|	-	1.9	8.6	11.8	0.73	9.9	1.6	2.2	1	1	0	2	2	2	0	PHF5-like	protein
zf-C3HC4_3	PF13920.1	gi|557694747|ref|YP_008797801.1|	-	4.8	6.9	14.1	4.8	6.9	0.8	2.8	1	1	2	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
C1_1	PF00130.17	gi|557694747|ref|YP_008797801.1|	-	5.1	6.9	12.8	3.4	7.4	1.0	2.8	2	1	1	3	3	3	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF2387	PF09526.5	gi|557694747|ref|YP_008797801.1|	-	6.4	6.7	13.4	33	4.5	4.8	3.4	2	1	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Ribosomal_S27	PF01599.14	gi|557694747|ref|YP_008797801.1|	-	7	6.5	13.8	2.4	8.0	0.8	3.0	3	0	0	3	3	2	0	Ribosomal	protein	S27a
Prok-RING_1	PF14446.1	gi|557694747|ref|YP_008797801.1|	-	8	6.2	17.4	11	5.8	4.7	3.4	2	2	1	3	3	3	0	Prokaryotic	RING	finger	family	1
T2SE	PF00437.15	gi|557694748|ref|YP_008797802.1|	-	9.5e-38	129.6	0.0	1.8e-37	128.7	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_18	PF13238.1	gi|557694748|ref|YP_008797802.1|	-	1.2e-05	25.5	0.1	8e-05	22.9	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|557694748|ref|YP_008797802.1|	-	8.3e-05	22.0	0.6	0.00018	20.9	0.1	1.8	2	0	0	2	2	1	1	P-loop	containing	region	of	AAA	domain
AAA_33	PF13671.1	gi|557694748|ref|YP_008797802.1|	-	0.0001	22.2	0.0	0.00021	21.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|557694748|ref|YP_008797802.1|	-	0.00012	22.5	0.5	0.0014	18.9	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
ABC_tran	PF00005.22	gi|557694748|ref|YP_008797802.1|	-	0.00033	20.9	0.0	0.0015	18.8	0.0	2.0	2	0	0	2	2	1	1	ABC	transporter
Zeta_toxin	PF06414.7	gi|557694748|ref|YP_008797802.1|	-	0.00039	19.5	0.0	0.00076	18.6	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
AAA_17	PF13207.1	gi|557694748|ref|YP_008797802.1|	-	0.00056	20.7	0.1	0.0044	17.8	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|557694748|ref|YP_008797802.1|	-	0.00066	19.7	0.0	0.0014	18.6	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557694748|ref|YP_008797802.1|	-	0.00095	19.3	0.0	0.0024	18.0	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|557694748|ref|YP_008797802.1|	-	0.001	18.7	0.1	0.0045	16.6	0.0	2.1	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_14	PF13173.1	gi|557694748|ref|YP_008797802.1|	-	0.0017	18.2	0.1	0.016	15.1	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|557694748|ref|YP_008797802.1|	-	0.0022	17.7	0.1	0.0087	15.7	0.0	2.1	2	0	0	2	2	1	1	Part	of	AAA	domain
cobW	PF02492.14	gi|557694748|ref|YP_008797802.1|	-	0.011	15.2	0.2	0.029	13.8	0.1	1.7	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Arch_ATPase	PF01637.13	gi|557694748|ref|YP_008797802.1|	-	0.011	15.4	0.0	0.029	14.0	0.0	1.6	1	0	0	1	1	1	0	Archaeal	ATPase
DEAD	PF00270.24	gi|557694748|ref|YP_008797802.1|	-	0.012	15.1	0.0	0.018	14.5	0.0	1.5	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
NACHT	PF05729.7	gi|557694748|ref|YP_008797802.1|	-	0.014	15.0	0.0	0.027	14.1	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_21	PF13304.1	gi|557694748|ref|YP_008797802.1|	-	0.014	15.3	0.0	0.035	14.0	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|557694748|ref|YP_008797802.1|	-	0.017	14.5	0.6	0.061	12.7	0.3	2.0	1	1	1	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.12	gi|557694748|ref|YP_008797802.1|	-	0.018	14.6	0.0	0.034	13.6	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
Mg_chelatase	PF01078.16	gi|557694748|ref|YP_008797802.1|	-	0.018	14.1	0.0	0.03	13.4	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
FtsK_SpoIIIE	PF01580.13	gi|557694748|ref|YP_008797802.1|	-	0.021	14.3	0.1	0.042	13.3	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
SMC_N	PF02463.14	gi|557694748|ref|YP_008797802.1|	-	0.021	14.0	0.0	0.062	12.5	0.0	1.7	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
AAA_5	PF07728.9	gi|557694748|ref|YP_008797802.1|	-	0.021	14.5	0.0	0.042	13.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.1	gi|557694748|ref|YP_008797802.1|	-	0.022	14.3	0.0	0.047	13.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|557694748|ref|YP_008797802.1|	-	0.04	13.5	0.1	0.084	12.5	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
PhoH	PF02562.11	gi|557694748|ref|YP_008797802.1|	-	0.04	13.1	0.0	0.089	12.0	0.0	1.5	1	0	0	1	1	1	0	PhoH-like	protein
RNA12	PF10443.4	gi|557694748|ref|YP_008797802.1|	-	0.041	12.3	0.0	0.069	11.6	0.0	1.3	1	0	0	1	1	1	0	RNA12	protein
Pox_A32	PF04665.7	gi|557694748|ref|YP_008797802.1|	-	0.041	13.1	0.0	0.11	11.7	0.0	1.6	2	0	0	2	2	1	0	Poxvirus	A32	protein
Miro	PF08477.8	gi|557694748|ref|YP_008797802.1|	-	0.045	14.2	0.0	0.12	12.9	0.0	1.7	1	0	0	1	1	1	0	Miro-like	protein
DUF258	PF03193.11	gi|557694748|ref|YP_008797802.1|	-	0.052	12.7	0.0	0.1	11.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|557694748|ref|YP_008797802.1|	-	0.071	13.3	0.0	0.19	11.9	0.0	1.8	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|557694748|ref|YP_008797802.1|	-	0.076	12.7	0.0	0.23	11.1	0.0	1.8	1	0	0	1	1	1	0	NTPase
Viral_helicase1	PF01443.13	gi|557694748|ref|YP_008797802.1|	-	0.084	12.3	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
SRP54	PF00448.17	gi|557694748|ref|YP_008797802.1|	-	0.087	12.2	0.1	0.16	11.3	0.1	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
NB-ARC	PF00931.17	gi|557694748|ref|YP_008797802.1|	-	0.095	11.5	0.0	0.2	10.5	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
ResIII	PF04851.10	gi|557694748|ref|YP_008797802.1|	-	0.11	12.3	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_10	PF12846.2	gi|557694748|ref|YP_008797802.1|	-	0.12	11.8	0.0	0.24	10.7	0.0	1.5	1	0	0	1	1	1	0	AAA-like	domain
SRPRB	PF09439.5	gi|557694748|ref|YP_008797802.1|	-	0.12	11.5	0.0	0.28	10.3	0.0	1.6	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
MMR_HSR1	PF01926.18	gi|557694748|ref|YP_008797802.1|	-	0.13	12.2	0.0	0.39	10.6	0.0	1.9	2	0	0	2	2	1	0	50S	ribosome-binding	GTPase
DUF2244	PF10003.4	gi|557694749|ref|YP_008797803.1|	-	1.5	8.2	4.8	2.1	7.6	3.3	1.2	1	0	0	1	1	1	0	Integral	membrane	protein	(DUF2244)
Usp	PF00582.21	gi|557694750|ref|YP_008797804.1|	-	2.5e-31	108.7	2.2	3e-31	108.4	1.5	1.1	1	0	0	1	1	1	1	Universal	stress	protein	family
AP_endonuc_2	PF01261.19	gi|557694750|ref|YP_008797804.1|	-	0.0019	17.5	0.0	0.0051	16.1	0.0	1.6	1	1	1	2	2	2	2	Xylose	isomerase-like	TIM	barrel
DUF3208	PF11482.3	gi|557694750|ref|YP_008797804.1|	-	0.053	13.6	0.0	0.072	13.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3208)
ABC-3	PF00950.12	gi|557694752|ref|YP_008797806.1|	-	1.8e-44	152.0	33.9	2.1e-44	151.7	23.5	1.0	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.13	gi|557694752|ref|YP_008797806.1|	-	0.0052	15.6	35.6	0.0078	15.0	24.4	1.4	1	1	0	1	1	1	1	FecCD	transport	family
ABC_tran	PF00005.22	gi|557694753|ref|YP_008797807.1|	-	9.1e-28	97.2	0.0	1.2e-27	96.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694753|ref|YP_008797807.1|	-	2.7e-12	47.2	0.0	1.2e-05	25.4	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
AAA_10	PF12846.2	gi|557694753|ref|YP_008797807.1|	-	3.6e-06	26.6	0.1	0.043	13.2	0.1	2.2	2	0	0	2	2	2	2	AAA-like	domain
SMC_N	PF02463.14	gi|557694753|ref|YP_008797807.1|	-	9e-06	25.0	0.1	0.041	13.1	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|557694753|ref|YP_008797807.1|	-	0.00026	21.2	0.0	0.015	15.4	0.0	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|557694753|ref|YP_008797807.1|	-	0.00034	20.0	0.1	0.00069	19.0	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|557694753|ref|YP_008797807.1|	-	0.00089	18.4	0.0	0.17	10.8	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|557694753|ref|YP_008797807.1|	-	0.0051	16.2	0.7	0.0099	15.2	0.1	1.8	2	1	0	2	2	1	1	AAA	domain
PIF1	PF05970.9	gi|557694753|ref|YP_008797807.1|	-	0.0053	15.7	0.1	0.032	13.2	0.0	1.9	2	0	0	2	2	2	1	PIF1-like	helicase
NACHT	PF05729.7	gi|557694753|ref|YP_008797807.1|	-	0.011	15.4	0.7	0.019	14.6	0.5	1.7	1	1	0	1	1	1	0	NACHT	domain
AAA_30	PF13604.1	gi|557694753|ref|YP_008797807.1|	-	0.012	15.2	0.1	0.55	9.7	0.0	2.3	2	1	1	3	3	3	0	AAA	domain
Arch_ATPase	PF01637.13	gi|557694753|ref|YP_008797807.1|	-	0.019	14.6	0.0	0.034	13.8	0.0	1.6	1	1	0	1	1	1	0	Archaeal	ATPase
NTPase_1	PF03266.10	gi|557694753|ref|YP_008797807.1|	-	0.025	14.3	0.0	0.058	13.0	0.0	1.7	1	0	0	1	1	1	0	NTPase
AAA_23	PF13476.1	gi|557694753|ref|YP_008797807.1|	-	0.027	14.8	0.1	0.04	14.2	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|557694753|ref|YP_008797807.1|	-	0.054	12.8	0.2	9.7	5.5	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_24	PF13479.1	gi|557694753|ref|YP_008797807.1|	-	0.083	12.4	0.7	0.18	11.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.1	gi|557694753|ref|YP_008797807.1|	-	0.083	12.8	0.0	0.74	9.7	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_14	PF13173.1	gi|557694753|ref|YP_008797807.1|	-	0.086	12.7	0.1	1.8	8.4	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
MutS_V	PF00488.16	gi|557694753|ref|YP_008797807.1|	-	0.087	12.2	0.2	1.3	8.3	0.0	2.0	2	0	0	2	2	2	0	MutS	domain	V
T2SE	PF00437.15	gi|557694753|ref|YP_008797807.1|	-	0.089	11.6	0.0	0.14	10.9	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|557694753|ref|YP_008797807.1|	-	0.11	12.2	1.2	0.3	10.8	0.1	2.4	2	1	0	2	2	2	0	Part	of	AAA	domain
Miro	PF08477.8	gi|557694753|ref|YP_008797807.1|	-	0.13	12.7	0.0	0.22	12.0	0.0	1.4	1	0	0	1	1	1	0	Miro-like	protein
AAA_22	PF13401.1	gi|557694753|ref|YP_008797807.1|	-	0.19	11.8	0.8	0.63	10.1	0.5	2.1	1	1	0	1	1	1	0	AAA	domain
TroA	PF01297.12	gi|557694754|ref|YP_008797808.1|	-	9.5e-58	195.4	0.0	1.1e-57	195.2	0.0	1.0	1	0	0	1	1	1	1	Periplasmic	solute	binding	protein	family
RRN3	PF05327.6	gi|557694754|ref|YP_008797808.1|	-	0.064	11.3	0.0	0.082	10.9	0.0	1.1	1	0	0	1	1	1	0	RNA	polymerase	I	specific	transcription	initiation	factor	RRN3
EBP	PF05241.7	gi|557694754|ref|YP_008797808.1|	-	0.12	11.4	0.0	0.17	10.8	0.0	1.2	1	0	0	1	1	1	0	Emopamil	binding	protein
Fe_dep_repr_C	PF02742.10	gi|557694755|ref|YP_008797809.1|	-	1.9e-18	65.9	0.2	3.1e-18	65.2	0.1	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|557694755|ref|YP_008797809.1|	-	6.1e-08	32.4	0.1	1.1e-07	31.7	0.1	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR_2	PF12802.2	gi|557694755|ref|YP_008797809.1|	-	0.00016	21.2	0.0	0.00027	20.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|557694755|ref|YP_008797809.1|	-	0.0021	18.3	0.1	0.0056	16.9	0.0	1.8	3	0	0	3	3	3	1	Winged	helix	DNA-binding	domain
GntR	PF00392.16	gi|557694755|ref|YP_008797809.1|	-	0.0028	17.0	0.0	0.0048	16.3	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
MarR	PF01047.17	gi|557694755|ref|YP_008797809.1|	-	0.0046	16.6	0.1	0.012	15.2	0.0	1.7	2	0	0	2	2	2	1	MarR	family
LexA_DNA_bind	PF01726.11	gi|557694755|ref|YP_008797809.1|	-	0.011	15.3	0.0	0.022	14.3	0.0	1.5	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Lipoprotein_8	PF02030.10	gi|557694755|ref|YP_008797809.1|	-	0.04	12.4	0.0	0.043	12.3	0.0	1.1	1	0	0	1	1	1	0	Hypothetical	lipoprotein	(MG045	family)
Rrf2	PF02082.15	gi|557694755|ref|YP_008797809.1|	-	0.085	12.9	0.0	0.13	12.3	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
TrmB	PF01978.14	gi|557694755|ref|YP_008797809.1|	-	0.1	12.3	0.0	0.15	11.8	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
NUDIX	PF00293.23	gi|557694756|ref|YP_008797810.1|	-	1.8e-17	63.2	0.1	2.1e-17	63.0	0.0	1.0	1	0	0	1	1	1	1	NUDIX	domain
AIRS	PF00586.19	gi|557694757|ref|YP_008797811.1|	-	2.1e-18	66.3	0.0	4.3e-18	65.3	0.0	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|557694757|ref|YP_008797811.1|	-	7.3e-07	29.3	0.0	1.1e-06	28.7	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
Glycos_transf_2	PF00535.21	gi|557694758|ref|YP_008797812.1|	-	2.1e-26	92.6	0.0	6e-26	91.1	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|557694758|ref|YP_008797812.1|	-	5.3e-11	42.7	0.0	7.6e-11	42.2	0.0	1.4	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|557694758|ref|YP_008797812.1|	-	0.014	15.6	0.0	0.041	14.2	0.0	1.7	2	0	0	2	2	2	0	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|557694758|ref|YP_008797812.1|	-	0.034	13.2	0.0	0.072	12.1	0.0	1.5	2	0	0	2	2	2	0	Glycosyltransferase	like	family	2
DnaJ	PF00226.26	gi|557694759|ref|YP_008797813.1|	-	4.9e-13	48.6	0.2	1.4e-12	47.1	0.0	1.9	2	0	0	2	2	2	1	DnaJ	domain
KIP1	PF07765.7	gi|557694759|ref|YP_008797813.1|	-	0.063	13.1	1.8	4.9	7.0	0.0	2.8	3	0	0	3	3	3	0	KIP1-like	protein
4HBT_2	PF13279.1	gi|557694760|ref|YP_008797814.1|	-	4.2e-09	36.8	0.0	5.2e-09	36.5	0.0	1.0	1	0	0	1	1	1	1	Thioesterase-like	superfamily
Acyl-ACP_TE	PF01643.12	gi|557694760|ref|YP_008797814.1|	-	1e-06	27.9	0.0	1.1e-06	27.8	0.0	1.1	1	0	0	1	1	1	1	Acyl-ACP	thioesterase
4HBT	PF03061.17	gi|557694760|ref|YP_008797814.1|	-	0.00068	19.7	0.0	0.00099	19.1	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	superfamily
DUF35	PF01796.12	gi|557694761|ref|YP_008797815.1|	-	3.1e-18	65.7	0.5	3.1e-18	65.7	0.3	1.5	2	0	0	2	2	2	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|557694761|ref|YP_008797815.1|	-	6.2e-14	51.4	1.3	1e-13	50.7	0.9	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Sterol-sensing	PF12349.3	gi|557694761|ref|YP_008797815.1|	-	0.02	14.3	0.0	0.021	14.2	0.0	1.1	1	0	0	1	1	1	0	Sterol-sensing	domain	of	SREBP	cleavage-activation
DNA_RNApol_7kD	PF03604.8	gi|557694761|ref|YP_008797815.1|	-	1.8	8.1	4.4	1.1	8.7	0.4	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Thiolase_C	PF02803.13	gi|557694762|ref|YP_008797816.1|	-	0.03	13.7	0.0	0.44	9.9	0.0	2.3	2	0	0	2	2	2	0	Thiolase,	C-terminal	domain
Ald_Xan_dh_C2	PF02738.13	gi|557694763|ref|YP_008797817.1|	-	9.1e-131	436.8	0.2	1.2e-130	436.4	0.1	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557694763|ref|YP_008797817.1|	-	3.6e-31	107.5	0.0	4.3e-30	104.0	0.0	2.6	2	0	0	2	2	2	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Acyl-CoA_dh_1	PF00441.19	gi|557694764|ref|YP_008797818.1|	-	2.3e-38	131.6	0.0	3.1e-38	131.2	0.0	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|557694764|ref|YP_008797818.1|	-	7.4e-20	71.5	1.1	1.2e-19	70.8	0.7	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|557694764|ref|YP_008797818.1|	-	2.5e-19	69.9	0.4	2.5e-19	69.9	0.3	1.9	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|557694764|ref|YP_008797818.1|	-	5.2e-19	67.4	0.1	1.1e-18	66.4	0.1	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
PALP	PF00291.20	gi|557694765|ref|YP_008797819.1|	-	3e-31	108.8	0.0	3.8e-31	108.4	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
PROL5-SMR	PF15621.1	gi|557694765|ref|YP_008797819.1|	-	0.42	11.0	5.6	5.7	7.4	0.9	3.2	3	1	0	3	3	3	0	Proline-rich	submaxillary	gland	androgen-regulated	family
ERCC4	PF02732.10	gi|557694766|ref|YP_008797820.1|	-	7.1e-13	48.5	0.0	1e-12	47.9	0.0	1.2	1	0	0	1	1	1	1	ERCC4	domain
HHH_2	PF12826.2	gi|557694766|ref|YP_008797820.1|	-	0.061	13.2	0.0	0.11	12.3	0.0	1.5	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|557694766|ref|YP_008797820.1|	-	0.11	12.6	0.0	0.23	11.6	0.0	1.5	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
5_3_exonuc	PF01367.15	gi|557694766|ref|YP_008797820.1|	-	0.12	12.5	0.0	0.36	11.0	0.0	1.8	2	0	0	2	2	2	0	5'-3'	exonuclease,	C-terminal	SAM	fold
Peripla_BP_6	PF13458.1	gi|557694767|ref|YP_008797821.1|	-	1.1e-40	140.0	2.5	1.4e-40	139.7	1.7	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
ANF_receptor	PF01094.23	gi|557694767|ref|YP_008797821.1|	-	7.6e-19	67.7	0.0	1.4e-18	66.8	0.0	1.4	1	1	0	1	1	1	1	Receptor	family	ligand	binding	region
Peripla_BP_5	PF13433.1	gi|557694767|ref|YP_008797821.1|	-	3.7e-13	48.9	0.0	3e-09	36.0	0.0	2.6	2	1	0	2	2	2	2	Periplasmic	binding	protein	domain
DUF2749	PF10907.3	gi|557694767|ref|YP_008797821.1|	-	0.62	9.9	3.3	1.7	8.5	2.3	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2749)
BPD_transp_2	PF02653.11	gi|557694768|ref|YP_008797822.1|	-	9.9e-32	109.9	41.3	1.2e-31	109.7	28.6	1.1	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
DUF4131	PF13567.1	gi|557694768|ref|YP_008797822.1|	-	0.031	13.6	1.0	0.031	13.6	0.7	3.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4131)
DUF3529	PF12046.3	gi|557694768|ref|YP_008797822.1|	-	8.1	5.4	9.3	0.89	8.5	0.8	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3529)
BPD_transp_2	PF02653.11	gi|557694769|ref|YP_008797823.1|	-	3.6e-30	104.8	34.6	3.6e-30	104.8	24.0	1.5	2	0	0	2	2	2	1	Branched-chain	amino	acid	transport	system	/	permease	component
ABC_tran	PF00005.22	gi|557694770|ref|YP_008797824.1|	-	1.6e-27	96.4	0.0	3.4e-27	95.4	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
BCA_ABC_TP_C	PF12399.3	gi|557694770|ref|YP_008797824.1|	-	6e-06	25.7	0.0	1.3e-05	24.7	0.0	1.6	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_21	PF13304.1	gi|557694770|ref|YP_008797824.1|	-	0.00016	21.7	0.1	0.001	19.1	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|557694770|ref|YP_008797824.1|	-	0.0015	18.9	0.2	0.0028	17.9	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|557694770|ref|YP_008797824.1|	-	0.0094	15.8	0.0	0.047	13.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|557694770|ref|YP_008797824.1|	-	0.016	14.3	0.0	0.77	8.8	0.0	2.1	2	0	0	2	2	2	0	Zeta	toxin
AAA_29	PF13555.1	gi|557694770|ref|YP_008797824.1|	-	0.017	14.6	0.1	0.035	13.6	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Rad17	PF03215.10	gi|557694770|ref|YP_008797824.1|	-	0.051	12.2	0.0	0.067	11.8	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_22	PF13401.1	gi|557694770|ref|YP_008797824.1|	-	0.055	13.6	0.5	1.1	9.3	0.0	2.5	2	1	0	2	2	2	0	AAA	domain
Arch_ATPase	PF01637.13	gi|557694770|ref|YP_008797824.1|	-	0.059	13.0	0.0	0.086	12.5	0.0	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
DUF258	PF03193.11	gi|557694770|ref|YP_008797824.1|	-	0.066	12.4	0.0	0.1	11.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
SbcCD_C	PF13558.1	gi|557694770|ref|YP_008797824.1|	-	0.11	12.4	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_16	PF13191.1	gi|557694770|ref|YP_008797824.1|	-	0.12	12.3	0.0	0.28	11.1	0.0	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
ABC_tran	PF00005.22	gi|557694771|ref|YP_008797825.1|	-	4.8e-30	104.6	0.0	7.7e-30	103.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694771|ref|YP_008797825.1|	-	4.3e-11	43.3	0.0	1.6e-05	25.0	0.1	2.1	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694771|ref|YP_008797825.1|	-	2.4e-05	23.6	0.0	0.016	14.4	0.0	2.1	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|557694771|ref|YP_008797825.1|	-	7.3e-05	22.2	0.5	0.00039	19.8	0.3	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|557694771|ref|YP_008797825.1|	-	0.0001	22.4	0.2	0.0012	19.0	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|557694771|ref|YP_008797825.1|	-	0.00011	22.6	0.0	0.00015	22.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557694771|ref|YP_008797825.1|	-	0.00034	20.0	0.0	0.00063	19.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
IstB_IS21	PF01695.12	gi|557694771|ref|YP_008797825.1|	-	0.0016	17.9	0.1	0.02	14.2	0.0	2.1	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
SRP54	PF00448.17	gi|557694771|ref|YP_008797825.1|	-	0.0018	17.7	0.0	0.0032	16.9	0.0	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|557694771|ref|YP_008797825.1|	-	0.0018	19.1	0.3	0.0043	17.8	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|557694771|ref|YP_008797825.1|	-	0.0027	17.5	0.1	0.0092	15.8	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
Dynamin_N	PF00350.18	gi|557694771|ref|YP_008797825.1|	-	0.004	17.0	0.0	0.011	15.6	0.0	1.6	1	1	0	1	1	1	1	Dynamin	family
AAA_16	PF13191.1	gi|557694771|ref|YP_008797825.1|	-	0.0065	16.4	0.1	0.017	15.1	0.1	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_13	PF13166.1	gi|557694771|ref|YP_008797825.1|	-	0.012	14.1	0.0	1.2	7.5	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|557694771|ref|YP_008797825.1|	-	0.013	15.1	0.3	0.034	13.7	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|557694771|ref|YP_008797825.1|	-	0.014	14.3	0.1	0.047	12.5	0.1	1.8	1	1	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_15	PF13175.1	gi|557694771|ref|YP_008797825.1|	-	0.015	14.3	0.0	0.067	12.2	0.0	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
ABC_ATPase	PF09818.4	gi|557694771|ref|YP_008797825.1|	-	0.016	13.8	0.1	6.8	5.1	0.0	2.9	3	0	0	3	3	3	0	Predicted	ATPase	of	the	ABC	class
MMR_HSR1	PF01926.18	gi|557694771|ref|YP_008797825.1|	-	0.016	15.1	0.3	0.076	12.9	0.2	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
MobB	PF03205.9	gi|557694771|ref|YP_008797825.1|	-	0.017	14.8	0.1	0.037	13.7	0.1	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_28	PF13521.1	gi|557694771|ref|YP_008797825.1|	-	0.017	15.0	1.0	0.036	14.0	0.1	1.9	2	0	0	2	2	1	0	AAA	domain
PhoH	PF02562.11	gi|557694771|ref|YP_008797825.1|	-	0.019	14.2	0.4	0.033	13.4	0.0	1.5	2	0	0	2	2	1	0	PhoH-like	protein
AAA	PF00004.24	gi|557694771|ref|YP_008797825.1|	-	0.019	15.1	0.2	0.068	13.3	0.1	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|557694771|ref|YP_008797825.1|	-	0.022	14.6	0.1	0.16	11.8	0.0	2.3	2	2	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|557694771|ref|YP_008797825.1|	-	0.023	13.8	0.1	0.039	13.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NACHT	PF05729.7	gi|557694771|ref|YP_008797825.1|	-	0.031	13.9	0.9	0.14	11.8	0.3	2.0	2	0	0	2	2	2	0	NACHT	domain
AAA_10	PF12846.2	gi|557694771|ref|YP_008797825.1|	-	0.035	13.5	1.1	0.14	11.5	0.2	1.9	1	1	0	2	2	2	0	AAA-like	domain
Arch_ATPase	PF01637.13	gi|557694771|ref|YP_008797825.1|	-	0.037	13.7	0.0	0.07	12.8	0.0	1.5	1	1	0	1	1	1	0	Archaeal	ATPase
NB-ARC	PF00931.17	gi|557694771|ref|YP_008797825.1|	-	0.052	12.3	0.1	0.1	11.4	0.1	1.5	1	0	0	1	1	1	0	NB-ARC	domain
AAA_19	PF13245.1	gi|557694771|ref|YP_008797825.1|	-	0.067	12.9	0.1	0.067	12.9	0.1	2.0	3	0	0	3	3	1	0	Part	of	AAA	domain
SbcCD_C	PF13558.1	gi|557694771|ref|YP_008797825.1|	-	0.071	13.0	0.4	0.25	11.2	0.1	2.2	2	1	0	2	2	1	0	Putative	exonuclease	SbcCD,	C	subunit
PduV-EutP	PF10662.4	gi|557694771|ref|YP_008797825.1|	-	0.1	12.1	0.0	0.18	11.2	0.0	1.4	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
DUF3584	PF12128.3	gi|557694771|ref|YP_008797825.1|	-	0.17	9.2	0.0	0.24	8.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Amidohydro_1	PF01979.15	gi|557694772|ref|YP_008797826.1|	-	2.5e-25	89.8	0.0	4.6e-25	88.9	0.0	1.4	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|557694772|ref|YP_008797826.1|	-	1.9e-13	51.0	0.0	2.6e-12	47.3	0.0	2.5	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|557694772|ref|YP_008797826.1|	-	1.5e-07	31.1	0.0	6e-07	29.1	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|557694772|ref|YP_008797826.1|	-	1.6e-06	27.5	0.1	0.00014	21.2	0.0	2.9	3	0	0	3	3	3	1	Amidohydrolase	family
LAGLIDADG_3	PF14528.1	gi|557694773|ref|YP_008797827.1|	-	5e-17	61.9	0.0	9.6e-13	48.1	0.0	2.2	2	0	0	2	2	2	2	LAGLIDADG-like	domain
LAGLIDADG_WhiA	PF14527.1	gi|557694773|ref|YP_008797827.1|	-	0.00071	19.4	0.0	1.4	8.7	0.0	2.2	2	0	0	2	2	2	2	WhiA	LAGLIDADG-like	domain
YcfA	PF07927.7	gi|557694773|ref|YP_008797827.1|	-	0.037	13.9	5.1	0.3	11.0	0.1	3.1	2	1	0	2	2	2	0	YcfA-like	protein
LAGLIDADG_1	PF00961.14	gi|557694774|ref|YP_008797828.1|	-	3.1e-19	69.4	0.0	3e-12	47.0	0.0	2.5	3	0	0	3	3	3	2	LAGLIDADG	endonuclease
LAGLIDADG_3	PF14528.1	gi|557694774|ref|YP_008797828.1|	-	0.00012	22.1	0.0	0.0039	17.4	0.0	2.7	2	1	0	2	2	2	1	LAGLIDADG-like	domain
DUF1308	PF07000.6	gi|557694774|ref|YP_008797828.1|	-	0.1	11.2	0.0	0.15	10.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1308)
LAGLIDADG_3	PF14528.1	gi|557694775|ref|YP_008797829.1|	-	2.1e-05	24.6	0.0	0.0072	16.5	0.0	2.4	2	0	0	2	2	2	2	LAGLIDADG-like	domain
LAGLIDADG_1	PF00961.14	gi|557694775|ref|YP_008797829.1|	-	0.026	15.0	0.6	1.7	9.2	0.1	2.7	2	2	0	2	2	2	0	LAGLIDADG	endonuclease
DAO	PF01266.19	gi|557694776|ref|YP_008797830.1|	-	2e-12	46.6	1.9	4.6e-07	29.0	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|557694776|ref|YP_008797830.1|	-	1.1e-10	41.1	0.8	1.1e-10	41.1	0.6	1.4	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|557694776|ref|YP_008797830.1|	-	4.1e-07	28.8	4.9	0.00051	18.6	0.0	2.7	3	0	0	3	3	3	2	HI0933-like	protein
Thi4	PF01946.12	gi|557694776|ref|YP_008797830.1|	-	1.5e-06	27.4	0.2	9.8e-06	24.8	0.1	2.3	2	0	0	2	2	2	1	Thi4	family
FAD_binding_3	PF01494.14	gi|557694776|ref|YP_008797830.1|	-	4.7e-06	25.9	9.3	0.0056	15.7	0.2	2.9	2	1	0	3	3	3	2	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|557694776|ref|YP_008797830.1|	-	3.4e-05	23.8	0.4	0.00043	20.2	0.3	2.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|557694776|ref|YP_008797830.1|	-	8.1e-05	21.7	1.5	0.00085	18.3	0.3	2.3	2	1	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_2	PF00890.19	gi|557694776|ref|YP_008797830.1|	-	0.00058	18.8	0.3	0.0064	15.3	0.2	2.2	2	0	0	2	2	2	1	FAD	binding	domain
Amino_oxidase	PF01593.19	gi|557694776|ref|YP_008797830.1|	-	0.0054	15.8	3.5	0.35	9.8	0.0	3.0	3	0	0	3	3	3	1	Flavin	containing	amine	oxidoreductase
Pyr_redox_3	PF13738.1	gi|557694776|ref|YP_008797830.1|	-	0.012	15.6	3.2	0.86	9.6	0.0	2.6	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|557694776|ref|YP_008797830.1|	-	0.022	14.7	0.1	0.067	13.2	0.0	1.9	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|557694776|ref|YP_008797830.1|	-	0.024	13.5	3.0	0.1	11.4	0.0	2.3	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|557694776|ref|YP_008797830.1|	-	0.036	14.4	1.1	3.9	7.9	0.1	2.6	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
TfuA	PF07812.7	gi|557694776|ref|YP_008797830.1|	-	0.35	10.3	4.0	0.25	10.7	0.1	2.5	3	0	0	3	3	3	0	TfuA-like	protein
E1_dh	PF00676.15	gi|557694777|ref|YP_008797831.1|	-	5.5e-88	294.5	0.0	6.3e-88	294.3	0.0	1.0	1	0	0	1	1	1	1	Dehydrogenase	E1	component
TPP_enzyme_C	PF02775.16	gi|557694777|ref|YP_008797831.1|	-	6.6e-06	25.7	1.4	8.3e-05	22.1	0.2	2.5	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Transketolase_N	PF00456.16	gi|557694777|ref|YP_008797831.1|	-	7.2e-06	25.0	0.0	1.1e-05	24.4	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
DXP_synthase_N	PF13292.1	gi|557694777|ref|YP_008797831.1|	-	8.7e-06	24.8	0.0	1.4e-05	24.2	0.0	1.2	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
DUF35_N	PF12172.3	gi|557694778|ref|YP_008797832.1|	-	7.7e-07	28.8	0.2	1.5e-06	27.9	0.2	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|557694778|ref|YP_008797832.1|	-	0.029	14.5	0.4	0.041	14.0	0.3	1.2	1	0	0	1	1	1	0	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|557694779|ref|YP_008797833.1|	-	9.8e-09	34.8	3.2	1.9e-08	33.9	2.2	1.5	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|557694779|ref|YP_008797833.1|	-	4.5e-07	29.9	0.1	1.3e-06	28.4	0.2	1.7	2	0	0	2	2	2	1	DUF35	OB-fold	domain
DZR	PF12773.2	gi|557694779|ref|YP_008797833.1|	-	0.088	12.6	0.1	0.15	11.9	0.1	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
Thiolase_C	PF02803.13	gi|557694780|ref|YP_008797834.1|	-	1.2e-05	24.7	0.0	0.019	14.3	0.0	3.3	3	0	0	3	3	3	2	Thiolase,	C-terminal	domain
DXP_redisom_C	PF08436.7	gi|557694780|ref|YP_008797834.1|	-	0.04	13.8	0.0	0.52	10.2	0.0	2.5	3	0	0	3	3	3	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase	C-terminal
DUF2797	PF10977.3	gi|557694780|ref|YP_008797834.1|	-	0.078	12.5	0.2	0.17	11.4	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2797)
Thiolase_C	PF02803.13	gi|557694781|ref|YP_008797835.1|	-	2.3e-06	27.0	0.1	6.6e-06	25.5	0.0	1.8	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
Acyl-CoA_dh_1	PF00441.19	gi|557694782|ref|YP_008797836.1|	-	3.8e-32	111.4	0.4	5.8e-32	110.8	0.3	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|557694782|ref|YP_008797836.1|	-	8.8e-17	60.3	0.1	1.7e-16	59.4	0.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|557694782|ref|YP_008797836.1|	-	1.7e-12	47.7	2.1	3e-12	46.9	1.5	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|557694782|ref|YP_008797836.1|	-	3.8e-06	27.4	0.4	1.4e-05	25.6	0.0	2.0	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
HpaB_N	PF11794.3	gi|557694782|ref|YP_008797836.1|	-	0.11	11.8	0.0	0.17	11.2	0.0	1.2	1	0	0	1	1	1	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
Ni_hydr_CYTB	PF01292.15	gi|557694783|ref|YP_008797837.1|	-	1.2e-05	24.7	8.7	0.00063	19.1	0.5	2.1	1	1	1	2	2	2	2	Prokaryotic	cytochrome	b561
Cytochrom_B_N	PF00033.14	gi|557694783|ref|YP_008797837.1|	-	3.7e-05	23.1	9.3	0.00085	18.7	0.8	2.2	2	0	0	2	2	2	2	Cytochrome	b(N-terminal)/b6/petB
DUF4405	PF14358.1	gi|557694783|ref|YP_008797837.1|	-	0.038	14.1	12.4	0.2	11.8	1.2	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4405)
Ferric_reduct	PF01794.14	gi|557694783|ref|YP_008797837.1|	-	0.072	13.1	8.7	0.47	10.5	5.2	2.2	1	1	1	2	2	2	0	Ferric	reductase	like	transmembrane	component
DUF1634	PF07843.6	gi|557694783|ref|YP_008797837.1|	-	4.1	7.0	10.2	0.19	11.3	0.6	2.9	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1634)
AMP-binding	PF00501.23	gi|557694784|ref|YP_008797838.1|	-	3e-50	170.8	0.0	3.6e-50	170.5	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|557694784|ref|YP_008797838.1|	-	0.00044	21.1	0.1	0.0028	18.5	0.0	2.3	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
VKOR	PF07884.9	gi|557694785|ref|YP_008797839.1|	-	9.3	6.1	21.8	2.7	7.8	2.6	3.1	1	1	2	3	3	3	0	Vitamin	K	epoxide	reductase	family
Snf7	PF03357.16	gi|557694786|ref|YP_008797840.1|	-	5.5e-07	29.1	0.4	6.4e-07	28.9	0.3	1.1	1	0	0	1	1	1	1	Snf7
DUF948	PF06103.6	gi|557694786|ref|YP_008797840.1|	-	0.015	15.1	0.0	0.04	13.7	0.0	1.7	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
LOH1CR12	PF10158.4	gi|557694786|ref|YP_008797840.1|	-	0.023	14.4	0.3	0.061	13.1	0.2	1.7	2	0	0	2	2	2	0	Tumour	suppressor	protein
tRNA-synt_1	PF00133.17	gi|557694787|ref|YP_008797841.1|	-	5.3e-57	193.1	0.0	2.7e-48	164.3	0.0	2.5	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|557694787|ref|YP_008797841.1|	-	4.4e-22	78.2	0.1	3.4e-10	39.1	0.0	4.2	4	0	0	4	4	4	2	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|557694787|ref|YP_008797841.1|	-	5.7e-16	58.6	0.0	1.5e-15	57.3	0.0	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.14	gi|557694787|ref|YP_008797841.1|	-	1.8e-12	47.0	0.1	4.5e-08	32.5	0.0	3.2	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.1	gi|557694787|ref|YP_008797841.1|	-	3.1e-08	33.1	0.0	7.7e-08	31.8	0.0	1.6	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1f	PF01921.13	gi|557694787|ref|YP_008797841.1|	-	0.024	13.3	0.0	0.1	11.2	0.0	1.9	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
DrsE	PF02635.10	gi|557694788|ref|YP_008797842.1|	-	1.8e-08	34.4	0.0	2e-08	34.3	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
GMC_oxred_C	PF05199.8	gi|557694788|ref|YP_008797842.1|	-	0.014	15.7	0.0	0.027	14.7	0.0	1.5	1	1	0	1	1	1	0	GMC	oxidoreductase
NTP_transf_2	PF01909.18	gi|557694789|ref|YP_008797843.1|	-	2.1e-08	34.3	1.0	3.4e-08	33.6	0.7	1.4	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|557694789|ref|YP_008797843.1|	-	0.0033	17.0	0.0	0.0052	16.3	0.0	1.4	1	0	0	1	1	1	1	Putative	nucleotidyltransferase	DUF294
HEPN	PF05168.9	gi|557694790|ref|YP_008797844.1|	-	1.9e-14	53.5	0.0	2.4e-14	53.2	0.0	1.1	1	0	0	1	1	1	1	HEPN	domain
NMT1	PF09084.6	gi|557694791|ref|YP_008797845.1|	-	1.1e-46	159.2	0.0	1.3e-46	158.8	0.0	1.1	1	0	0	1	1	1	1	NMT1/THI5	like
NMT1_2	PF13379.1	gi|557694791|ref|YP_008797845.1|	-	1.5e-11	44.1	0.2	6.9e-11	42.0	0.2	1.8	1	1	0	1	1	1	1	NMT1-like	family
SBP_bac_3	PF00497.15	gi|557694791|ref|YP_008797845.1|	-	0.0063	15.7	0.0	0.016	14.4	0.0	1.9	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
OpuAC	PF04069.7	gi|557694791|ref|YP_008797845.1|	-	0.084	12.2	0.3	0.96	8.7	0.2	2.5	1	1	0	1	1	1	0	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
Phosphonate-bd	PF12974.2	gi|557694791|ref|YP_008797845.1|	-	0.094	12.0	0.0	0.18	11.1	0.0	1.5	1	1	0	1	1	1	0	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
ABC_tran	PF00005.22	gi|557694792|ref|YP_008797846.1|	-	1.7e-30	106.1	0.0	2.3e-30	105.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694792|ref|YP_008797846.1|	-	5.3e-12	46.3	0.0	2e-05	24.6	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|557694792|ref|YP_008797846.1|	-	4.3e-06	26.0	0.0	0.0033	16.5	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|557694792|ref|YP_008797846.1|	-	0.00014	21.9	0.0	0.00022	21.2	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|557694792|ref|YP_008797846.1|	-	0.00074	18.9	0.4	0.018	14.4	0.1	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|557694792|ref|YP_008797846.1|	-	0.00081	19.5	0.4	0.0084	16.2	0.3	2.2	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|557694792|ref|YP_008797846.1|	-	0.00087	19.0	0.0	0.0026	17.4	0.0	1.8	2	0	0	2	2	2	1	Archaeal	ATPase
DUF258	PF03193.11	gi|557694792|ref|YP_008797846.1|	-	0.004	16.3	0.1	0.0062	15.7	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Rad17	PF03215.10	gi|557694792|ref|YP_008797846.1|	-	0.0046	15.7	0.0	0.0061	15.3	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
SMC_N	PF02463.14	gi|557694792|ref|YP_008797846.1|	-	0.0053	16.0	0.0	0.059	12.5	0.0	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|557694792|ref|YP_008797846.1|	-	0.0053	16.2	0.0	0.0097	15.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|557694792|ref|YP_008797846.1|	-	0.0071	16.6	0.2	0.011	16.0	0.1	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|557694792|ref|YP_008797846.1|	-	0.0096	16.7	0.6	0.026	15.3	0.4	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557694792|ref|YP_008797846.1|	-	0.0098	15.6	0.0	0.024	14.4	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_30	PF13604.1	gi|557694792|ref|YP_008797846.1|	-	0.015	14.9	0.0	0.022	14.3	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|557694792|ref|YP_008797846.1|	-	0.021	15.0	0.0	0.065	13.4	0.0	1.8	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_11	PF13086.1	gi|557694792|ref|YP_008797846.1|	-	0.037	13.6	0.0	0.044	13.3	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|557694792|ref|YP_008797846.1|	-	0.039	13.4	0.0	0.039	13.4	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_5	PF07728.9	gi|557694792|ref|YP_008797846.1|	-	0.053	13.2	0.0	0.14	11.9	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.1	gi|557694792|ref|YP_008797846.1|	-	0.058	13.7	0.0	0.092	13.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|557694792|ref|YP_008797846.1|	-	0.059	13.2	0.0	0.13	12.1	0.0	1.6	2	0	0	2	2	1	0	AAA	domain
ABC_ATPase	PF09818.4	gi|557694792|ref|YP_008797846.1|	-	0.065	11.8	0.0	3.4	6.1	0.0	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
NB-ARC	PF00931.17	gi|557694792|ref|YP_008797846.1|	-	0.092	11.5	0.4	0.21	10.3	0.0	1.7	2	0	0	2	2	2	0	NB-ARC	domain
RNA_helicase	PF00910.17	gi|557694792|ref|YP_008797846.1|	-	0.12	12.5	0.1	0.3	11.2	0.0	1.6	2	0	0	2	2	1	0	RNA	helicase
SbcCD_C	PF13558.1	gi|557694792|ref|YP_008797846.1|	-	0.15	11.9	0.0	0.34	10.8	0.0	1.6	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
KH_2	PF07650.12	gi|557694792|ref|YP_008797846.1|	-	0.16	11.5	0.7	1.2	8.7	0.1	2.5	3	0	0	3	3	3	0	KH	domain
BPD_transp_1	PF00528.17	gi|557694793|ref|YP_008797847.1|	-	1.4e-22	80.1	19.4	1.4e-22	80.1	13.5	1.9	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF61	PF01886.11	gi|557694794|ref|YP_008797848.1|	-	1e-22	80.4	0.0	1.2e-22	80.2	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
DUF543	PF04418.7	gi|557694795|ref|YP_008797849.1|	-	0.17	11.8	3.4	4.5	7.2	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF543)
DUF2273	PF10031.4	gi|557694795|ref|YP_008797849.1|	-	0.2	11.2	0.5	0.2	11.2	0.4	3.3	2	1	0	2	2	2	0	Small	integral	membrane	protein	(DUF2273)
DUF1700	PF08006.6	gi|557694795|ref|YP_008797849.1|	-	1.1	8.5	9.4	1.2	8.3	6.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
DUF2784	PF10861.3	gi|557694795|ref|YP_008797849.1|	-	1.1	9.0	5.0	0.87	9.3	2.7	1.5	1	1	0	1	1	1	0	Protein	of	Unknown	function	(DUF2784)
FUN14	PF04930.10	gi|557694795|ref|YP_008797849.1|	-	2.8	8.2	7.2	18	5.6	0.1	2.2	2	0	0	2	2	2	0	FUN14	family
LRR19-TM	PF15176.1	gi|557694795|ref|YP_008797849.1|	-	7.7	6.2	5.7	5.6	6.7	1.7	2.0	2	0	0	2	2	2	0	Leucine-rich	repeat	family	19	TM	domain
Ribonuc_L-PSP	PF01042.16	gi|557694796|ref|YP_008797850.1|	-	1.8e-39	134.2	0.1	2e-39	134.1	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
DUF162	PF02589.10	gi|557694797|ref|YP_008797851.1|	-	4.5e-42	143.7	0.2	9e-42	142.7	0.1	1.5	1	0	0	1	1	1	1	Uncharacterised	ACR,	YkgG	family	COG1556
Fer4_8	PF13183.1	gi|557694797|ref|YP_008797851.1|	-	3.6e-09	36.4	5.2	2.3e-08	33.9	3.9	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|557694797|ref|YP_008797851.1|	-	1.2e-08	35.1	3.1	0.001	19.4	0.2	2.7	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|557694797|ref|YP_008797851.1|	-	1.3e-07	31.2	5.9	1.4e-06	27.9	4.8	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|557694797|ref|YP_008797851.1|	-	1.5e-07	31.6	1.5	5.1e-07	29.9	1.1	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
CCG	PF02754.11	gi|557694797|ref|YP_008797851.1|	-	8e-07	28.9	0.2	6.1e-06	26.1	0.6	2.2	2	0	0	2	2	2	1	Cysteine-rich	domain
Fer4_9	PF13187.1	gi|557694797|ref|YP_008797851.1|	-	8.1e-07	29.2	3.5	0.012	15.8	0.1	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|557694797|ref|YP_008797851.1|	-	1.1e-06	27.9	16.2	0.0011	18.4	2.5	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|557694797|ref|YP_008797851.1|	-	1.5e-06	27.8	12.2	0.0026	17.5	2.0	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|557694797|ref|YP_008797851.1|	-	2e-05	25.0	4.0	0.0099	16.4	0.1	3.2	3	0	0	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|557694797|ref|YP_008797851.1|	-	5.5e-05	23.1	11.0	0.035	14.4	1.7	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|557694797|ref|YP_008797851.1|	-	5.6e-05	23.4	7.8	0.00044	20.5	5.6	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|557694797|ref|YP_008797851.1|	-	0.0002	21.6	9.4	0.0087	16.4	0.2	3.1	3	0	0	3	3	2	2	4Fe-4S	single	cluster	domain
Fer4_2	PF12797.2	gi|557694797|ref|YP_008797851.1|	-	0.00023	20.8	13.1	0.016	15.1	1.7	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|557694797|ref|YP_008797851.1|	-	0.00041	19.9	0.9	0.038	13.6	0.1	2.5	2	0	0	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_3	PF12798.2	gi|557694797|ref|YP_008797851.1|	-	0.002	18.5	15.9	0.027	15.0	2.6	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
DUF460	PF04312.8	gi|557694797|ref|YP_008797851.1|	-	0.0096	15.4	0.0	0.023	14.2	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
Fer4_21	PF14697.1	gi|557694797|ref|YP_008797851.1|	-	0.017	14.9	12.5	0.52	10.2	8.8	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|557694797|ref|YP_008797851.1|	-	0.043	14.5	10.7	1.1	10.0	8.0	2.4	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
DUF162	PF02589.10	gi|557694798|ref|YP_008797852.1|	-	4.5e-24	84.9	0.1	7.2e-24	84.3	0.1	1.3	1	1	0	1	1	1	1	Uncharacterised	ACR,	YkgG	family	COG1556
Peripla_BP_4	PF13407.1	gi|557694798|ref|YP_008797852.1|	-	0.034	13.5	0.0	0.16	11.3	0.0	1.8	1	1	1	2	2	2	0	Periplasmic	binding	protein	domain
DUF2023	PF09633.5	gi|557694798|ref|YP_008797852.1|	-	0.059	13.3	0.0	0.1	12.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2023)
Trm112p	PF03966.11	gi|557694799|ref|YP_008797853.1|	-	1.7e-11	44.2	0.4	3.4e-11	43.3	0.3	1.5	1	0	0	1	1	1	1	Trm112p-like	protein
Prok-RING_1	PF14446.1	gi|557694799|ref|YP_008797853.1|	-	0.05	13.3	0.8	3.7	7.3	0.0	2.4	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
Pox_vIL-18BP	PF05566.7	gi|557694799|ref|YP_008797853.1|	-	0.085	12.8	0.0	0.11	12.5	0.0	1.1	1	0	0	1	1	1	0	Orthopoxvirus	interleukin	18	binding	protein
zf-Dof	PF02701.10	gi|557694799|ref|YP_008797853.1|	-	0.13	12.1	0.6	0.27	11.1	0.1	1.8	1	1	1	2	2	2	0	Dof	domain,	zinc	finger
Glyco_tranf_2_3	PF13641.1	gi|557694800|ref|YP_008797854.1|	-	3.8e-44	151.1	0.0	5.1e-44	150.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|557694800|ref|YP_008797854.1|	-	2.7e-39	134.5	0.0	4e-39	134.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.1	gi|557694800|ref|YP_008797854.1|	-	3.6e-28	98.5	0.6	3.6e-28	98.5	0.4	2.3	3	0	0	3	3	3	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|557694800|ref|YP_008797854.1|	-	1.6e-15	56.7	0.1	2.6e-15	56.1	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|557694800|ref|YP_008797854.1|	-	6.4e-10	38.5	0.0	1.5e-09	37.3	0.0	1.5	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Chitin_synth_2	PF03142.10	gi|557694800|ref|YP_008797854.1|	-	7.5e-10	37.8	0.2	2.4e-08	32.8	0.0	2.9	2	1	1	3	3	3	1	Chitin	synthase
Glyco_tranf_2_4	PF13704.1	gi|557694800|ref|YP_008797854.1|	-	2.9e-05	24.2	0.0	7.2e-05	23.0	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_5	PF13712.1	gi|557694800|ref|YP_008797854.1|	-	0.0011	18.2	0.0	0.059	12.6	0.0	2.1	1	1	1	2	2	2	1	Glycosyltransferase	like	family
RrnaAD	PF00398.15	gi|557694801|ref|YP_008797855.1|	-	3.9e-20	71.9	0.0	6.9e-20	71.1	0.0	1.4	2	0	0	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_26	PF13659.1	gi|557694801|ref|YP_008797855.1|	-	4e-10	39.7	0.0	4.5e-09	36.3	0.0	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557694801|ref|YP_008797855.1|	-	7.6e-07	29.7	0.0	1.1e-06	29.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|557694801|ref|YP_008797855.1|	-	4.4e-06	26.2	0.0	3.7e-05	23.1	0.0	2.0	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
MTS	PF05175.9	gi|557694801|ref|YP_008797855.1|	-	9.6e-06	25.0	0.0	1.7e-05	24.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Met_10	PF02475.11	gi|557694801|ref|YP_008797855.1|	-	8e-05	22.3	0.3	0.00048	19.7	0.1	2.0	2	0	0	2	2	2	1	Met-10+	like-protein
Methyltransf_31	PF13847.1	gi|557694801|ref|YP_008797855.1|	-	0.00011	21.8	0.0	0.00015	21.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|557694801|ref|YP_008797855.1|	-	0.00037	19.7	0.0	0.00055	19.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
UPF0020	PF01170.13	gi|557694801|ref|YP_008797855.1|	-	0.0023	17.5	0.0	0.036	13.6	0.0	2.2	2	1	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|557694801|ref|YP_008797855.1|	-	0.014	15.8	0.0	0.027	14.9	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|557694801|ref|YP_008797855.1|	-	0.026	14.8	0.0	0.051	13.9	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
TFR_dimer	PF04253.10	gi|557694801|ref|YP_008797855.1|	-	0.033	13.7	0.0	0.068	12.7	0.0	1.5	1	0	0	1	1	1	0	Transferrin	receptor-like	dimerisation	domain
SAM_MT	PF04445.8	gi|557694801|ref|YP_008797855.1|	-	0.036	13.2	0.1	0.054	12.6	0.0	1.2	1	0	0	1	1	1	0	Putative	SAM-dependent	methyltransferase
Methyltransf_32	PF13679.1	gi|557694801|ref|YP_008797855.1|	-	0.089	12.4	0.0	0.16	11.6	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
DREV	PF05219.7	gi|557694801|ref|YP_008797855.1|	-	0.1	11.4	0.0	0.15	10.8	0.0	1.2	1	0	0	1	1	1	0	DREV	methyltransferase
PCMT	PF01135.14	gi|557694801|ref|YP_008797855.1|	-	0.14	11.6	0.1	0.34	10.4	0.0	1.6	2	0	0	2	2	2	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_23	PF13489.1	gi|557694801|ref|YP_008797855.1|	-	0.16	11.6	0.0	0.33	10.6	0.0	1.5	2	0	0	2	2	2	0	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|557694801|ref|YP_008797855.1|	-	0.16	11.5	0.0	0.28	10.7	0.0	1.7	1	1	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Macro	PF01661.16	gi|557694803|ref|YP_008797857.1|	-	1.5e-37	128.1	0.0	1.8e-37	127.8	0.0	1.1	1	0	0	1	1	1	1	Macro	domain
Macro_2	PF14519.1	gi|557694803|ref|YP_008797857.1|	-	0.13	11.3	0.0	0.51	9.3	0.0	1.7	2	0	0	2	2	2	0	Macro-like	domain
zinc_ribbon_4	PF13717.1	gi|557694804|ref|YP_008797858.1|	-	0.00018	21.0	0.2	0.21	11.2	0.1	2.2	1	1	1	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|557694804|ref|YP_008797858.1|	-	0.00024	20.6	0.2	0.21	11.2	0.1	2.2	1	1	1	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|557694804|ref|YP_008797858.1|	-	0.00041	19.4	2.5	0.1	11.8	0.1	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|557694804|ref|YP_008797858.1|	-	0.00053	19.3	3.7	0.0068	15.8	2.6	2.1	1	1	1	2	2	2	2	zinc-ribbon	domain
Peptidase_M50B	PF13398.1	gi|557694804|ref|YP_008797858.1|	-	0.00057	19.3	4.6	0.00072	19.0	3.2	1.0	1	0	0	1	1	1	1	Peptidase	M50B-like
zf-NADH-PPase	PF09297.6	gi|557694804|ref|YP_008797858.1|	-	0.0022	17.4	3.9	0.12	11.9	0.1	2.9	3	0	0	3	3	3	1	NADH	pyrophosphatase	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|557694804|ref|YP_008797858.1|	-	0.0024	17.1	1.3	1.1	8.5	0.1	2.2	2	0	0	2	2	2	2	TFIIB	zinc-binding
PhnA_Zn_Ribbon	PF08274.7	gi|557694804|ref|YP_008797858.1|	-	0.0035	17.0	0.7	0.3	10.9	0.0	2.2	2	0	0	2	2	2	1	PhnA	Zinc-Ribbon
FYDLN_acid	PF09538.5	gi|557694804|ref|YP_008797858.1|	-	0.0049	17.4	0.5	0.022	15.3	0.3	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(FYDLN_acid)
zf-HYPF	PF07503.7	gi|557694804|ref|YP_008797858.1|	-	0.0054	16.1	1.7	2	7.8	0.9	2.2	1	1	1	2	2	2	2	HypF	finger
HypA	PF01155.14	gi|557694804|ref|YP_008797858.1|	-	0.0075	15.9	0.3	0.01	15.4	0.2	1.2	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
DZR	PF12773.2	gi|557694804|ref|YP_008797858.1|	-	0.0091	15.7	0.7	0.015	15.1	0.5	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
DUF1272	PF06906.6	gi|557694804|ref|YP_008797858.1|	-	0.037	13.8	1.0	0.062	13.1	0.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
ADK_lid	PF05191.9	gi|557694804|ref|YP_008797858.1|	-	0.045	13.4	0.3	6.3	6.5	0.0	2.4	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
CpXC	PF14353.1	gi|557694804|ref|YP_008797858.1|	-	0.047	13.6	1.5	1.6	8.7	0.1	2.1	1	1	1	2	2	2	0	CpXC	protein
Zn-ribbon_8	PF09723.5	gi|557694804|ref|YP_008797858.1|	-	0.063	13.2	3.1	0.25	11.3	2.2	1.9	1	1	0	1	1	1	0	Zinc	ribbon	domain
DUF2039	PF10217.4	gi|557694804|ref|YP_008797858.1|	-	0.076	13.0	0.2	0.096	12.7	0.1	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2039)
NOB1_Zn_bind	PF08772.6	gi|557694804|ref|YP_008797858.1|	-	0.096	12.5	0.7	0.14	11.9	0.5	1.2	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Prok-RING_1	PF14446.1	gi|557694804|ref|YP_008797858.1|	-	0.11	12.2	2.1	0.43	10.3	1.5	1.7	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
A2L_zn_ribbon	PF08792.5	gi|557694804|ref|YP_008797858.1|	-	0.12	11.8	4.0	0.87	9.1	2.7	2.0	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|557694804|ref|YP_008797858.1|	-	0.17	11.6	0.6	13	5.6	0.0	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
Zn_Tnp_IS1595	PF12760.2	gi|557694804|ref|YP_008797858.1|	-	1.5	8.6	4.3	10	6.0	0.3	2.3	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
DUF35_N	PF12172.3	gi|557694804|ref|YP_008797858.1|	-	1.8	8.5	4.0	22	5.1	2.8	2.3	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
RseC_MucC	PF04246.7	gi|557694804|ref|YP_008797858.1|	-	8.2	5.9	9.2	20	4.7	0.2	2.1	1	1	1	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
Rieske	PF00355.21	gi|557694805|ref|YP_008797859.1|	-	4.8e-15	54.9	0.0	5.3e-15	54.7	0.0	1.0	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|557694805|ref|YP_008797859.1|	-	3.2e-08	33.2	0.0	3.6e-08	33.0	0.0	1.0	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
Pyr_redox_2	PF07992.9	gi|557694806|ref|YP_008797860.1|	-	4e-30	105.2	8.3	1e-28	100.5	5.7	3.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|557694806|ref|YP_008797860.1|	-	2.8e-18	66.0	7.2	8e-17	61.4	0.6	2.9	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|557694806|ref|YP_008797860.1|	-	1.6e-17	64.2	1.2	1.2e-12	48.3	0.0	3.1	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|557694806|ref|YP_008797860.1|	-	5.5e-10	38.6	11.4	0.00088	18.2	0.0	4.0	3	1	1	4	4	4	3	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|557694806|ref|YP_008797860.1|	-	7.9e-07	28.2	8.4	0.00011	21.2	0.6	3.3	2	1	2	4	4	4	2	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|557694806|ref|YP_008797860.1|	-	1.6e-06	27.4	3.2	4.3e-06	26.0	0.4	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|557694806|ref|YP_008797860.1|	-	8.3e-05	21.6	14.9	0.00019	20.4	1.3	4.5	2	2	3	5	5	5	1	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|557694806|ref|YP_008797860.1|	-	0.00016	20.7	1.5	0.051	12.4	0.1	3.6	3	1	1	4	4	4	1	Lycopene	cyclase	protein
Thi4	PF01946.12	gi|557694806|ref|YP_008797860.1|	-	0.00019	20.6	4.6	0.00089	18.4	0.4	2.7	2	1	0	2	2	2	1	Thi4	family
NAD_binding_7	PF13241.1	gi|557694806|ref|YP_008797860.1|	-	0.00058	20.0	2.3	0.34	11.1	0.2	2.7	2	1	0	2	2	2	2	Putative	NAD(P)-binding
FAD_binding_3	PF01494.14	gi|557694806|ref|YP_008797860.1|	-	0.00081	18.5	2.3	0.16	10.9	0.1	3.0	2	1	1	3	3	3	1	FAD	binding	domain
K_oxygenase	PF13434.1	gi|557694806|ref|YP_008797860.1|	-	0.00088	18.2	1.6	1.2	7.9	0.0	3.1	1	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|557694806|ref|YP_008797860.1|	-	0.001	17.6	5.7	0.001	17.5	0.3	3.2	4	1	1	5	5	5	1	HI0933-like	protein
Shikimate_DH	PF01488.15	gi|557694806|ref|YP_008797860.1|	-	0.0035	17.4	3.5	0.083	12.9	0.2	2.8	2	1	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_8	PF13450.1	gi|557694806|ref|YP_008797860.1|	-	0.012	15.6	0.7	0.2	11.7	0.1	2.3	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
Trp_halogenase	PF04820.9	gi|557694806|ref|YP_008797860.1|	-	0.019	13.5	2.4	0.036	12.7	0.6	2.0	2	0	0	2	2	2	0	Tryptophan	halogenase
DUF3184	PF11380.3	gi|557694806|ref|YP_008797860.1|	-	0.064	11.1	0.0	0.097	10.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3184)
TrkA_N	PF02254.13	gi|557694806|ref|YP_008797860.1|	-	0.14	12.1	1.8	2	8.4	0.0	3.0	2	1	0	2	2	2	0	TrkA-N	domain
NAD_binding_9	PF13454.1	gi|557694806|ref|YP_008797860.1|	-	1.6	8.4	3.9	34	4.1	0.3	3.1	3	0	0	3	3	3	0	FAD-NAD(P)-binding
Rieske	PF00355.21	gi|557694807|ref|YP_008797861.1|	-	1.2e-19	69.6	0.0	1.6e-19	69.2	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|557694807|ref|YP_008797861.1|	-	6e-17	61.2	0.0	7.8e-17	60.8	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
Urocanase	PF01175.13	gi|557694807|ref|YP_008797861.1|	-	0.12	10.3	0.0	0.12	10.3	0.0	1.1	1	0	0	1	1	1	0	Urocanase
Methyltransf_31	PF13847.1	gi|557694808|ref|YP_008797862.1|	-	3.2e-16	59.2	0.0	4.2e-16	58.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|557694808|ref|YP_008797862.1|	-	2.3e-12	46.5	0.0	2.9e-12	46.2	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.7	gi|557694808|ref|YP_008797862.1|	-	3.3e-11	43.5	0.0	4.8e-11	42.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|557694808|ref|YP_008797862.1|	-	3.9e-09	36.8	0.0	5.9e-09	36.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557694808|ref|YP_008797862.1|	-	5.4e-09	36.6	0.0	7.7e-09	36.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|557694808|ref|YP_008797862.1|	-	1.2e-07	31.9	0.0	1.7e-07	31.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|557694808|ref|YP_008797862.1|	-	3.3e-07	30.0	0.0	4.9e-07	29.5	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_23	PF13489.1	gi|557694808|ref|YP_008797862.1|	-	5.2e-07	29.5	0.0	6.7e-06	25.9	0.0	2.0	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|557694808|ref|YP_008797862.1|	-	4e-06	26.5	0.0	5.2e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|557694808|ref|YP_008797862.1|	-	8.4e-06	25.2	0.0	1.2e-05	24.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|557694808|ref|YP_008797862.1|	-	4.3e-05	23.5	0.0	6.1e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|557694808|ref|YP_008797862.1|	-	0.00017	20.7	0.0	0.00021	20.4	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_4	PF02390.12	gi|557694808|ref|YP_008797862.1|	-	0.0024	16.9	0.0	0.0036	16.3	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Fibrillarin	PF01269.12	gi|557694808|ref|YP_008797862.1|	-	0.004	16.1	0.0	0.083	11.7	0.0	2.1	2	0	0	2	2	2	1	Fibrillarin
FmrO	PF07091.6	gi|557694808|ref|YP_008797862.1|	-	0.01	14.8	0.0	0.012	14.5	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
PrmA	PF06325.8	gi|557694808|ref|YP_008797862.1|	-	0.018	14.1	0.0	0.023	13.8	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_3	PF01596.12	gi|557694808|ref|YP_008797862.1|	-	0.018	14.0	0.0	0.024	13.7	0.0	1.2	1	0	0	1	1	1	0	O-methyltransferase
Cons_hypoth95	PF03602.10	gi|557694808|ref|YP_008797862.1|	-	0.063	12.6	0.0	0.084	12.2	0.0	1.1	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
DOT1	PF08123.8	gi|557694808|ref|YP_008797862.1|	-	0.08	12.2	0.0	0.1	11.9	0.0	1.2	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
DREV	PF05219.7	gi|557694808|ref|YP_008797862.1|	-	0.086	11.7	0.0	0.45	9.3	0.0	1.8	1	1	0	2	2	2	0	DREV	methyltransferase
FtsJ	PF01728.14	gi|557694808|ref|YP_008797862.1|	-	0.14	12.1	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
DNA_pol_E_B	PF04042.11	gi|557694809|ref|YP_008797863.1|	-	2.8e-17	62.6	0.0	4.6e-17	61.9	0.0	1.3	1	0	0	1	1	1	1	DNA	polymerase	alpha/epsilon	subunit	B
Metallophos_2	PF12850.2	gi|557694809|ref|YP_008797863.1|	-	2e-08	34.2	0.0	3.4e-08	33.4	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|557694809|ref|YP_008797863.1|	-	3.3e-07	29.9	0.1	5.7e-07	29.1	0.0	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
tRNA_anti-codon	PF01336.20	gi|557694809|ref|YP_008797863.1|	-	0.025	14.4	0.0	0.049	13.4	0.0	1.5	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
PQQ_2	PF13360.1	gi|557694810|ref|YP_008797864.1|	-	1.5e-09	37.7	0.1	1.8e-06	27.5	0.1	2.8	1	1	2	3	3	3	2	PQQ-like	domain
DUF4660	PF15559.1	gi|557694810|ref|YP_008797864.1|	-	0.073	13.1	0.0	0.16	12.0	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4660)
DUF2428	PF10350.4	gi|557694811|ref|YP_008797865.1|	-	0.05	12.6	0.0	0.056	12.4	0.0	1.0	1	0	0	1	1	1	0	Putative	death-receptor	fusion	protein	(DUF2428)
Acetyltransf_11	PF13720.1	gi|557694811|ref|YP_008797865.1|	-	0.12	12.6	0.2	0.19	11.9	0.1	1.5	1	1	0	1	1	1	0	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
ABC_tran	PF00005.22	gi|557694812|ref|YP_008797866.1|	-	1.1e-29	103.5	0.0	1.8e-29	102.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694812|ref|YP_008797866.1|	-	7.7e-15	55.6	0.6	1.1e-06	28.9	0.1	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|557694812|ref|YP_008797866.1|	-	7.4e-06	26.4	0.1	1.3e-05	25.6	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557694812|ref|YP_008797866.1|	-	1.9e-05	24.0	0.1	4.1e-05	23.0	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|557694812|ref|YP_008797866.1|	-	0.00024	20.3	0.2	0.094	11.9	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|557694812|ref|YP_008797866.1|	-	0.00092	19.2	0.2	0.0034	17.4	0.1	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|557694812|ref|YP_008797866.1|	-	0.0012	18.3	0.2	0.011	15.1	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|557694812|ref|YP_008797866.1|	-	0.0021	18.1	0.7	0.021	14.9	0.5	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|557694812|ref|YP_008797866.1|	-	0.0022	17.1	0.0	0.0055	15.8	0.0	1.6	2	0	0	2	2	2	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|557694812|ref|YP_008797866.1|	-	0.0058	15.8	0.0	0.0095	15.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_30	PF13604.1	gi|557694812|ref|YP_008797866.1|	-	0.026	14.0	0.0	0.25	10.8	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|557694812|ref|YP_008797866.1|	-	0.032	14.2	0.0	0.048	13.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|557694812|ref|YP_008797866.1|	-	0.032	13.6	0.4	0.081	12.3	0.1	1.7	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
Arch_ATPase	PF01637.13	gi|557694812|ref|YP_008797866.1|	-	0.034	13.8	0.1	0.42	10.2	0.0	2.0	2	0	0	2	2	2	0	Archaeal	ATPase
AAA_10	PF12846.2	gi|557694812|ref|YP_008797866.1|	-	0.041	13.3	0.8	2.6	7.3	0.3	2.2	1	1	0	2	2	2	0	AAA-like	domain
MMR_HSR1	PF01926.18	gi|557694812|ref|YP_008797866.1|	-	0.073	13.0	0.9	0.55	10.2	0.7	2.1	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
UPF0079	PF02367.12	gi|557694812|ref|YP_008797866.1|	-	0.093	12.3	0.1	0.17	11.5	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_13	PF13166.1	gi|557694812|ref|YP_008797866.1|	-	0.11	10.9	0.1	0.34	9.3	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.4	gi|557694812|ref|YP_008797866.1|	-	0.11	11.9	0.2	0.2	11.1	0.1	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_19	PF13245.1	gi|557694812|ref|YP_008797866.1|	-	0.14	11.9	0.4	0.33	10.7	0.1	1.8	2	0	0	2	2	1	0	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|557694812|ref|YP_008797866.1|	-	0.15	11.1	0.0	0.27	10.3	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.1	gi|557694812|ref|YP_008797866.1|	-	0.18	11.7	0.2	0.42	10.4	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|557694812|ref|YP_008797866.1|	-	0.2	11.0	0.9	0.4	10.1	0.6	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
ABC_tran	PF00005.22	gi|557694813|ref|YP_008797867.1|	-	2.3e-25	89.4	0.0	3e-25	89.0	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
BCA_ABC_TP_C	PF12399.3	gi|557694813|ref|YP_008797867.1|	-	2.3e-09	36.6	0.5	6.3e-09	35.3	0.0	2.0	2	0	0	2	2	2	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_21	PF13304.1	gi|557694813|ref|YP_008797867.1|	-	0.00013	22.0	0.1	0.0015	18.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|557694813|ref|YP_008797867.1|	-	0.00015	21.2	1.4	0.0011	18.3	1.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|557694813|ref|YP_008797867.1|	-	0.00015	21.8	1.0	0.0036	17.4	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|557694813|ref|YP_008797867.1|	-	0.0024	17.3	0.0	0.0062	16.0	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|557694813|ref|YP_008797867.1|	-	0.0049	17.0	0.3	0.095	12.9	0.2	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_ATPase	PF09818.4	gi|557694813|ref|YP_008797867.1|	-	0.0049	15.5	3.7	0.0056	15.3	0.2	2.1	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
AAA_23	PF13476.1	gi|557694813|ref|YP_008797867.1|	-	0.005	17.1	0.2	0.0084	16.4	0.2	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|557694813|ref|YP_008797867.1|	-	0.0071	15.9	0.0	0.013	15.1	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557694813|ref|YP_008797867.1|	-	0.0087	15.7	0.3	0.29	10.9	0.1	2.4	2	0	0	2	2	2	1	Part	of	AAA	domain
UPF0079	PF02367.12	gi|557694813|ref|YP_008797867.1|	-	0.019	14.6	0.2	0.063	12.9	0.0	1.9	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
SMC_N	PF02463.14	gi|557694813|ref|YP_008797867.1|	-	0.02	14.1	1.0	1.5	8.0	0.2	2.2	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
T2SE	PF00437.15	gi|557694813|ref|YP_008797867.1|	-	0.035	13.0	0.0	0.056	12.3	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|557694813|ref|YP_008797867.1|	-	0.077	12.1	0.1	0.12	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|557694813|ref|YP_008797867.1|	-	0.083	12.7	0.4	4.8	7.1	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|557694813|ref|YP_008797867.1|	-	0.089	12.4	0.0	0.22	11.2	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NB-ARC	PF00931.17	gi|557694813|ref|YP_008797867.1|	-	0.14	11.0	0.9	1	8.1	0.2	2.0	2	0	0	2	2	2	0	NB-ARC	domain
MMR_HSR1	PF01926.18	gi|557694813|ref|YP_008797867.1|	-	0.16	11.9	0.4	0.24	11.3	0.3	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
BPD_transp_2	PF02653.11	gi|557694814|ref|YP_008797868.1|	-	1e-34	119.7	33.7	1.4e-34	119.2	23.4	1.2	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
BPD_transp_2	PF02653.11	gi|557694815|ref|YP_008797869.1|	-	1.3e-33	116.0	36.9	1.5e-33	115.8	25.6	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Peripla_BP_6	PF13458.1	gi|557694816|ref|YP_008797870.1|	-	7.8e-58	196.4	1.2	9.3e-58	196.2	0.8	1.0	1	0	0	1	1	1	1	Periplasmic	binding	protein
Peripla_BP_5	PF13433.1	gi|557694816|ref|YP_008797870.1|	-	3.1e-24	85.4	0.0	4e-24	85.0	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein	domain
ANF_receptor	PF01094.23	gi|557694816|ref|YP_008797870.1|	-	3.6e-15	55.6	0.0	4.3e-15	55.3	0.0	1.2	1	0	0	1	1	1	1	Receptor	family	ligand	binding	region
YjeF_N	PF03853.10	gi|557694817|ref|YP_008797871.1|	-	2.1e-41	141.3	0.3	2.9e-41	140.9	0.2	1.2	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
NAD_binding_10	PF13460.1	gi|557694817|ref|YP_008797871.1|	-	0.16	11.9	0.4	0.51	10.3	0.3	1.9	1	1	0	1	1	1	0	NADH(P)-binding
tRNA-synt_2b	PF00587.20	gi|557694818|ref|YP_008797872.1|	-	3e-35	121.3	0.0	6.6e-35	120.2	0.0	1.6	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|557694818|ref|YP_008797872.1|	-	8.8e-26	90.0	3.2	1.3e-25	89.4	2.2	1.3	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
HOOK	PF05622.7	gi|557694818|ref|YP_008797872.1|	-	0.0021	15.9	1.1	0.003	15.4	0.7	1.1	1	0	0	1	1	1	1	HOOK	protein
DUF677	PF05055.7	gi|557694818|ref|YP_008797872.1|	-	0.036	12.7	0.8	0.056	12.1	0.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
TMF_TATA_bd	PF12325.3	gi|557694818|ref|YP_008797872.1|	-	0.046	13.4	5.4	0.095	12.4	3.7	1.4	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
MtrB	PF05440.7	gi|557694818|ref|YP_008797872.1|	-	0.064	13.2	0.1	0.23	11.5	0.0	1.9	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
DltD_M	PF04918.7	gi|557694818|ref|YP_008797872.1|	-	0.08	13.1	0.4	0.13	12.3	0.3	1.2	1	0	0	1	1	1	0	DltD	central	region
Baculo_PEP_C	PF04513.7	gi|557694818|ref|YP_008797872.1|	-	0.14	11.9	0.1	0.27	11.0	0.0	1.4	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
V_ATPase_I	PF01496.14	gi|557694818|ref|YP_008797872.1|	-	0.61	7.8	1.9	0.89	7.3	1.3	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF342	PF03961.8	gi|557694818|ref|YP_008797872.1|	-	0.62	8.4	2.9	0.89	7.8	2.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
APG6	PF04111.7	gi|557694818|ref|YP_008797872.1|	-	0.73	8.8	3.3	1.4	7.9	2.3	1.3	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Macoilin	PF09726.4	gi|557694818|ref|YP_008797872.1|	-	2.9	6.0	4.6	4.2	5.5	3.2	1.1	1	0	0	1	1	1	0	Transmembrane	protein
FtsX	PF02687.16	gi|557694819|ref|YP_008797873.1|	-	5.9e-24	84.1	4.8	5.9e-24	84.1	3.3	2.1	2	0	0	2	2	2	1	FtsX-like	permease	family
MacB_PCD	PF12704.2	gi|557694819|ref|YP_008797873.1|	-	1.6e-22	80.2	0.3	1.6e-22	80.2	0.2	2.7	4	0	0	4	4	4	1	MacB-like	periplasmic	core	domain
CARDB	PF07705.6	gi|557694820|ref|YP_008797874.1|	-	3.9e-09	36.4	1.9	0.001	19.1	0.0	3.4	3	1	0	3	3	3	2	CARDB
NPCBM_assoc	PF10633.4	gi|557694820|ref|YP_008797874.1|	-	1.6e-07	31.2	3.1	0.0064	16.5	0.1	5.0	4	2	0	4	4	4	2	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
TRAP_beta	PF05753.9	gi|557694820|ref|YP_008797874.1|	-	0.0007	18.7	2.4	1.5	7.9	0.1	3.4	3	1	0	3	3	3	2	Translocon-associated	protein	beta	(TRAPB)
DUF11	PF01345.13	gi|557694820|ref|YP_008797874.1|	-	0.02	14.9	5.1	1.4	8.9	0.1	3.5	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF11
Transglut_C	PF00927.17	gi|557694820|ref|YP_008797874.1|	-	0.031	14.3	0.1	5.2	7.1	0.0	3.0	2	1	0	2	2	2	0	Transglutaminase	family,	C-terminal	ig	like	domain
NPCBM_assoc	PF10633.4	gi|557694821|ref|YP_008797875.1|	-	0.0085	16.1	0.1	0.6	10.1	0.0	2.4	2	0	0	2	2	2	2	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
ABC_tran	PF00005.22	gi|557694822|ref|YP_008797876.1|	-	4.2e-36	124.2	0.0	6e-36	123.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694822|ref|YP_008797876.1|	-	1.7e-14	54.5	0.1	1.7e-08	34.7	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694822|ref|YP_008797876.1|	-	1.1e-09	37.9	0.7	5.1e-06	25.8	0.1	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|557694822|ref|YP_008797876.1|	-	2.4e-06	27.6	0.3	1.1e-05	25.4	0.2	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|557694822|ref|YP_008797876.1|	-	7.8e-06	25.3	0.0	1.5e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.1	gi|557694822|ref|YP_008797876.1|	-	3.8e-05	22.3	0.0	0.0007	18.1	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|557694822|ref|YP_008797876.1|	-	4.3e-05	23.6	0.1	0.00036	20.6	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|557694822|ref|YP_008797876.1|	-	7e-05	22.0	0.0	0.00012	21.3	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|557694822|ref|YP_008797876.1|	-	7.4e-05	23.5	0.2	0.00028	21.6	0.1	2.0	2	1	0	2	2	2	1	AAA	domain
MMR_HSR1	PF01926.18	gi|557694822|ref|YP_008797876.1|	-	8.4e-05	22.5	0.5	0.0079	16.1	0.0	2.4	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_33	PF13671.1	gi|557694822|ref|YP_008797876.1|	-	0.0002	21.2	0.3	0.0017	18.2	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|557694822|ref|YP_008797876.1|	-	0.00021	20.4	0.0	0.25	10.3	0.0	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_10	PF12846.2	gi|557694822|ref|YP_008797876.1|	-	0.0004	19.9	0.3	0.00099	18.6	0.2	1.8	1	1	1	2	2	2	1	AAA-like	domain
AAA_25	PF13481.1	gi|557694822|ref|YP_008797876.1|	-	0.00063	19.2	0.0	0.017	14.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
SbcCD_C	PF13558.1	gi|557694822|ref|YP_008797876.1|	-	0.00065	19.5	0.0	0.0086	15.9	0.0	2.2	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_23	PF13476.1	gi|557694822|ref|YP_008797876.1|	-	0.0014	19.0	0.0	0.0031	17.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|557694822|ref|YP_008797876.1|	-	0.0015	18.8	0.5	0.015	15.6	0.4	2.3	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|557694822|ref|YP_008797876.1|	-	0.0017	18.0	0.1	0.011	15.3	0.0	2.1	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|557694822|ref|YP_008797876.1|	-	0.0027	17.3	0.7	0.052	13.2	0.1	2.4	1	1	1	2	2	2	1	NACHT	domain
IstB_IS21	PF01695.12	gi|557694822|ref|YP_008797876.1|	-	0.0028	17.1	0.1	0.097	12.0	0.0	2.2	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
NTPase_1	PF03266.10	gi|557694822|ref|YP_008797876.1|	-	0.0046	16.6	0.2	2.7	7.6	0.0	2.4	2	1	0	2	2	2	1	NTPase
AAA_30	PF13604.1	gi|557694822|ref|YP_008797876.1|	-	0.006	16.1	0.1	0.09	12.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_28	PF13521.1	gi|557694822|ref|YP_008797876.1|	-	0.0062	16.5	0.5	0.032	14.2	0.0	2.4	4	0	0	4	4	2	1	AAA	domain
AAA_19	PF13245.1	gi|557694822|ref|YP_008797876.1|	-	0.01	15.5	0.6	0.37	10.5	0.0	2.5	3	0	0	3	3	2	0	Part	of	AAA	domain
T2SE	PF00437.15	gi|557694822|ref|YP_008797876.1|	-	0.01	14.7	0.6	0.035	13.0	0.0	2.0	1	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
NB-ARC	PF00931.17	gi|557694822|ref|YP_008797876.1|	-	0.016	14.0	0.4	0.36	9.6	0.0	2.1	2	0	0	2	2	2	0	NB-ARC	domain
cobW	PF02492.14	gi|557694822|ref|YP_008797876.1|	-	0.018	14.5	1.0	0.062	12.7	0.0	1.9	1	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_24	PF13479.1	gi|557694822|ref|YP_008797876.1|	-	0.019	14.5	0.1	0.17	11.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
HK	PF02110.10	gi|557694822|ref|YP_008797876.1|	-	0.022	13.9	0.3	0.058	12.5	0.1	1.7	2	0	0	2	2	2	0	Hydroxyethylthiazole	kinase	family
MutS_V	PF00488.16	gi|557694822|ref|YP_008797876.1|	-	0.024	14.0	0.2	0.81	9.0	0.0	2.2	2	0	0	2	2	2	0	MutS	domain	V
FtsK_SpoIIIE	PF01580.13	gi|557694822|ref|YP_008797876.1|	-	0.026	14.0	0.0	0.051	13.0	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_14	PF13173.1	gi|557694822|ref|YP_008797876.1|	-	0.029	14.2	0.0	0.059	13.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|557694822|ref|YP_008797876.1|	-	0.03	13.1	0.3	0.084	11.6	0.0	1.8	2	0	0	2	2	2	0	ArgK	protein
ABC_ATPase	PF09818.4	gi|557694822|ref|YP_008797876.1|	-	0.043	12.4	0.3	0.62	8.5	0.0	2.6	3	0	0	3	3	3	0	Predicted	ATPase	of	the	ABC	class
Dynamin_N	PF00350.18	gi|557694822|ref|YP_008797876.1|	-	0.054	13.2	0.3	0.23	11.2	0.0	2.0	2	1	0	2	2	2	0	Dynamin	family
Zeta_toxin	PF06414.7	gi|557694822|ref|YP_008797876.1|	-	0.074	12.1	0.1	0.35	9.9	0.0	1.9	2	0	0	2	2	2	0	Zeta	toxin
ATP-synt_ab	PF00006.20	gi|557694822|ref|YP_008797876.1|	-	0.074	12.5	0.0	0.17	11.3	0.0	1.6	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Miro	PF08477.8	gi|557694822|ref|YP_008797876.1|	-	0.098	13.1	0.2	0.35	11.3	0.0	2.1	2	1	0	2	2	2	0	Miro-like	protein
Adeno_IVa2	PF02456.10	gi|557694822|ref|YP_008797876.1|	-	0.11	11.1	0.3	3.8	6.0	0.0	2.2	2	1	0	2	2	2	0	Adenovirus	IVa2	protein
KaiC	PF06745.8	gi|557694822|ref|YP_008797876.1|	-	0.11	11.6	1.7	5	6.1	0.1	2.8	2	1	1	3	3	3	0	KaiC
G-alpha	PF00503.15	gi|557694822|ref|YP_008797876.1|	-	0.11	11.1	0.0	0.11	11.1	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
KH_2	PF07650.12	gi|557694822|ref|YP_008797876.1|	-	0.13	11.8	1.4	0.27	10.7	0.1	2.2	2	0	0	2	2	2	0	KH	domain
SHMT	PF00464.14	gi|557694823|ref|YP_008797877.1|	-	1e-81	274.4	0.0	1.5e-81	273.8	0.0	1.2	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.16	gi|557694823|ref|YP_008797877.1|	-	1.7e-08	33.7	0.0	4.3e-08	32.4	0.0	1.6	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|557694823|ref|YP_008797877.1|	-	2.7e-08	33.3	0.0	4.8e-08	32.4	0.0	1.4	1	1	0	1	1	1	1	Beta-eliminating	lyase
SelA	PF03841.8	gi|557694823|ref|YP_008797877.1|	-	1.3e-05	24.1	0.0	2e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	L-seryl-tRNA	selenium	transferase
Aminotran_5	PF00266.14	gi|557694823|ref|YP_008797877.1|	-	0.0001	21.1	0.2	0.00035	19.4	0.1	1.9	1	1	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.12	gi|557694823|ref|YP_008797877.1|	-	0.01	14.8	0.1	0.014	14.4	0.0	1.4	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_3	PF00202.16	gi|557694824|ref|YP_008797878.1|	-	4.8e-63	213.0	0.0	6.3e-63	212.6	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|557694824|ref|YP_008797878.1|	-	0.022	13.7	0.0	0.2	10.5	0.0	2.0	1	1	0	1	1	1	0	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|557694824|ref|YP_008797878.1|	-	0.058	12.5	0.0	0.11	11.5	0.0	1.5	1	1	0	1	1	1	0	Beta-eliminating	lyase
NUDIX	PF00293.23	gi|557694825|ref|YP_008797879.1|	-	1.1e-17	63.8	0.1	1.3e-17	63.6	0.1	1.1	1	0	0	1	1	1	1	NUDIX	domain
UPF0051	PF01458.12	gi|557694826|ref|YP_008797880.1|	-	3.3e-60	203.3	0.9	4.2e-60	203.0	0.6	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
Y_phosphatase3	PF13350.1	gi|557694826|ref|YP_008797880.1|	-	0.047	13.9	0.0	0.091	13.0	0.0	1.4	1	0	0	1	1	1	0	Tyrosine	phosphatase	family
ArfGap	PF01412.13	gi|557694827|ref|YP_008797881.1|	-	0.025	14.3	2.7	0.53	10.0	0.2	2.3	1	1	1	2	2	2	0	Putative	GTPase	activating	protein	for	Arf
DZR	PF12773.2	gi|557694827|ref|YP_008797881.1|	-	0.056	13.2	6.5	8.2	6.3	4.5	2.8	1	1	0	1	1	1	0	Double	zinc	ribbon
LIM	PF00412.17	gi|557694827|ref|YP_008797881.1|	-	0.35	10.9	3.9	0.98	9.5	0.1	2.2	1	1	1	2	2	2	0	LIM	domain
zf-CHY	PF05495.7	gi|557694827|ref|YP_008797881.1|	-	0.52	10.4	4.4	1.8	8.7	0.2	2.3	1	1	1	2	2	2	0	CHY	zinc	finger
OrfB_Zn_ribbon	PF07282.6	gi|557694827|ref|YP_008797881.1|	-	1.3	8.7	7.8	1.8	8.2	0.5	2.7	1	1	2	3	3	3	0	Putative	transposase	DNA-binding	domain
RNA_POL_M_15KD	PF02150.11	gi|557694827|ref|YP_008797881.1|	-	1.4	8.6	0.0	1.4	8.6	0.0	3.0	2	1	1	3	3	3	0	RNA	polymerases	M/15	Kd	subunit
TF_Zn_Ribbon	PF08271.7	gi|557694827|ref|YP_008797881.1|	-	1.6	8.1	11.3	1.9	7.8	0.0	3.8	3	1	0	3	3	3	0	TFIIB	zinc-binding
RRN7	PF11781.3	gi|557694827|ref|YP_008797881.1|	-	2.9	7.4	10.4	6.9	6.2	0.1	3.2	3	0	0	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Zn-ribbon_8	PF09723.5	gi|557694827|ref|YP_008797881.1|	-	3.8	7.5	11.7	38	4.3	3.5	3.5	3	1	0	3	3	3	0	Zinc	ribbon	domain
zf-HYPF	PF07503.7	gi|557694827|ref|YP_008797881.1|	-	4.7	6.6	7.5	2.3	7.7	0.8	2.6	3	0	0	3	3	3	0	HypF	finger
DUF4428	PF14471.1	gi|557694827|ref|YP_008797881.1|	-	5	6.9	5.4	5.7	6.7	0.1	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4428)
Prok-RING_1	PF14446.1	gi|557694827|ref|YP_008797881.1|	-	5.3	6.8	7.7	30	4.4	0.1	2.7	2	1	0	2	2	2	0	Prokaryotic	RING	finger	family	1
TrmB	PF01978.14	gi|557694828|ref|YP_008797882.1|	-	0.00013	21.5	1.0	0.0012	18.4	0.1	2.6	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.1	gi|557694828|ref|YP_008797882.1|	-	0.00039	20.1	0.0	0.014	15.1	0.0	2.5	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
MarR_2	PF12802.2	gi|557694828|ref|YP_008797882.1|	-	0.00087	18.9	0.0	0.0062	16.1	0.0	2.2	2	0	0	2	2	2	1	MarR	family
Crp	PF00325.15	gi|557694828|ref|YP_008797882.1|	-	0.0035	16.7	0.0	0.014	14.8	0.0	2.0	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	crp	family
HTH_5	PF01022.15	gi|557694828|ref|YP_008797882.1|	-	0.0057	16.2	0.3	0.68	9.6	0.0	2.9	3	0	0	3	3	3	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|557694828|ref|YP_008797882.1|	-	0.0072	16.0	0.0	0.022	14.4	0.0	1.8	1	0	0	1	1	1	1	MarR	family
Penicillinase_R	PF03965.11	gi|557694828|ref|YP_008797882.1|	-	0.011	15.8	0.2	0.6	10.2	0.0	2.5	2	0	0	2	2	2	0	Penicillinase	repressor
GLTSCR1	PF15249.1	gi|557694828|ref|YP_008797882.1|	-	0.013	15.6	0.4	0.025	14.6	0.3	1.5	1	0	0	1	1	1	0	Glioma	tumor	suppressor	candidate	region
HTH_36	PF13730.1	gi|557694828|ref|YP_008797882.1|	-	0.016	15.3	0.0	0.053	13.6	0.0	1.9	1	1	0	1	1	1	0	Helix-turn-helix	domain
DUF773	PF05600.7	gi|557694828|ref|YP_008797882.1|	-	0.033	12.9	0.2	0.06	12.1	0.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF773)
Pec_lyase_N	PF04431.8	gi|557694828|ref|YP_008797882.1|	-	0.037	14.1	0.0	0.13	12.4	0.0	1.9	1	0	0	1	1	1	0	Pectate	lyase,	N	terminus
HTH_27	PF13463.1	gi|557694828|ref|YP_008797882.1|	-	0.039	14.2	0.0	0.11	12.7	0.0	2.0	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|557694828|ref|YP_008797882.1|	-	0.046	13.1	0.1	0.14	11.5	0.0	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
FlgN	PF05130.7	gi|557694828|ref|YP_008797882.1|	-	0.063	13.5	1.6	0.12	12.6	0.1	2.1	2	1	0	2	2	2	0	FlgN	protein
PfUIS3	PF11567.3	gi|557694828|ref|YP_008797882.1|	-	0.069	13.3	0.2	0.16	12.1	0.1	1.6	2	0	0	2	2	1	0	Plasmodium	falciparum	UIS3	membrane	protein
rve_3	PF13683.1	gi|557694828|ref|YP_008797882.1|	-	0.15	11.6	0.1	0.42	10.1	0.1	1.9	1	0	0	1	1	1	0	Integrase	core	domain
Apolipoprotein	PF01442.13	gi|557694828|ref|YP_008797882.1|	-	1.4	8.4	5.9	4.7	6.6	4.0	2.0	1	1	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
AAA	PF00004.24	gi|557694829|ref|YP_008797883.1|	-	3.1e-39	134.2	0.0	3e-37	127.7	0.0	2.5	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MIT	PF04212.13	gi|557694829|ref|YP_008797883.1|	-	2.1e-11	43.5	1.8	5.7e-11	42.1	1.2	1.7	1	0	0	1	1	1	1	MIT	(microtubule	interacting	and	transport)	domain
AAA_2	PF07724.9	gi|557694829|ref|YP_008797883.1|	-	2e-07	31.1	0.0	5.3e-07	29.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|557694829|ref|YP_008797883.1|	-	2.2e-07	31.0	0.0	1.4e-05	25.2	0.0	3.1	3	1	0	3	3	2	1	AAA	domain
AAA_5	PF07728.9	gi|557694829|ref|YP_008797883.1|	-	7.5e-07	28.9	0.0	2.4e-06	27.3	0.0	1.9	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|557694829|ref|YP_008797883.1|	-	8.5e-06	26.5	0.1	4.3e-05	24.3	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|557694829|ref|YP_008797883.1|	-	9.8e-06	25.4	0.0	5.1e-05	23.1	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|557694829|ref|YP_008797883.1|	-	2.2e-05	24.5	0.2	0.0017	18.3	0.0	2.8	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_33	PF13671.1	gi|557694829|ref|YP_008797883.1|	-	3.2e-05	23.8	0.0	9.3e-05	22.3	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|557694829|ref|YP_008797883.1|	-	3.8e-05	23.1	0.3	0.0081	15.5	0.1	2.4	1	1	1	2	2	2	1	AAA	domain
RuvB_N	PF05496.7	gi|557694829|ref|YP_008797883.1|	-	4e-05	22.7	0.0	7.8e-05	21.8	0.0	1.5	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Vps4_C	PF09336.5	gi|557694829|ref|YP_008797883.1|	-	8.7e-05	22.3	0.2	0.0082	16.0	0.0	2.5	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
TIP49	PF06068.8	gi|557694829|ref|YP_008797883.1|	-	0.00089	18.0	0.6	0.0035	16.1	0.0	2.1	2	1	1	3	3	3	1	TIP49	C-terminus
AAA_10	PF12846.2	gi|557694829|ref|YP_008797883.1|	-	0.00093	18.7	0.3	0.52	9.6	0.0	3.0	4	0	0	4	4	3	1	AAA-like	domain
Arch_ATPase	PF01637.13	gi|557694829|ref|YP_008797883.1|	-	0.0011	18.7	0.0	0.24	11.0	0.0	3.2	2	1	1	3	3	3	1	Archaeal	ATPase
RNA_helicase	PF00910.17	gi|557694829|ref|YP_008797883.1|	-	0.0018	18.4	0.0	0.015	15.4	0.0	2.6	3	1	0	3	3	2	1	RNA	helicase
AAA_19	PF13245.1	gi|557694829|ref|YP_008797883.1|	-	0.0023	17.6	0.0	0.0056	16.4	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
IstB_IS21	PF01695.12	gi|557694829|ref|YP_008797883.1|	-	0.0027	17.1	0.1	0.0061	15.9	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|557694829|ref|YP_008797883.1|	-	0.0027	18.0	0.0	0.015	15.5	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|557694829|ref|YP_008797883.1|	-	0.0038	16.3	0.0	0.011	14.8	0.0	1.8	2	0	0	2	2	2	1	Zeta	toxin
ABC_tran	PF00005.22	gi|557694829|ref|YP_008797883.1|	-	0.0043	17.3	0.0	0.14	12.4	0.0	2.3	2	0	0	2	2	2	1	ABC	transporter
ATP-synt_ab	PF00006.20	gi|557694829|ref|YP_008797883.1|	-	0.0056	16.1	0.0	0.0093	15.4	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Mg_chelatase	PF01078.16	gi|557694829|ref|YP_008797883.1|	-	0.0058	15.8	0.0	0.015	14.4	0.0	1.7	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.1	gi|557694829|ref|YP_008797883.1|	-	0.0096	15.8	0.0	0.031	14.2	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|557694829|ref|YP_008797883.1|	-	0.0096	15.0	0.0	1.8	7.6	0.0	2.5	1	1	1	2	2	2	1	KaiC
KAP_NTPase	PF07693.9	gi|557694829|ref|YP_008797883.1|	-	0.012	14.6	0.0	0.054	12.4	0.0	1.8	1	1	1	2	2	2	0	KAP	family	P-loop	domain
ResIII	PF04851.10	gi|557694829|ref|YP_008797883.1|	-	0.014	15.1	0.0	0.026	14.3	0.0	1.4	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
PhoH	PF02562.11	gi|557694829|ref|YP_008797883.1|	-	0.034	13.3	0.1	0.087	12.0	0.0	1.6	2	0	0	2	2	2	0	PhoH-like	protein
TPR_11	PF13414.1	gi|557694829|ref|YP_008797883.1|	-	0.064	12.9	0.0	0.18	11.5	0.0	1.7	1	0	0	1	1	1	0	TPR	repeat
NACHT	PF05729.7	gi|557694829|ref|YP_008797883.1|	-	0.07	12.7	0.0	0.16	11.6	0.0	1.7	1	1	0	1	1	1	0	NACHT	domain
SKI	PF01202.17	gi|557694829|ref|YP_008797883.1|	-	0.082	12.7	0.0	0.22	11.3	0.0	1.8	1	0	0	1	1	1	0	Shikimate	kinase
TPR_2	PF07719.12	gi|557694829|ref|YP_008797883.1|	-	0.1	12.5	0.5	0.6	10.1	0.1	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|557694829|ref|YP_008797883.1|	-	0.1	12.4	0.2	0.79	9.6	0.0	2.4	2	0	0	2	2	2	0	Tetratricopeptide	repeat
SMC_N	PF02463.14	gi|557694830|ref|YP_008797884.1|	-	8.6e-37	126.5	0.0	1.1e-36	126.2	0.0	1.1	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|557694830|ref|YP_008797884.1|	-	2.1e-18	67.3	0.9	7.3e-18	65.6	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_21	PF13304.1	gi|557694830|ref|YP_008797884.1|	-	7.3e-12	45.8	3.9	6.8e-06	26.2	0.0	2.9	2	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|557694830|ref|YP_008797884.1|	-	3.4e-07	29.6	1.5	0.00017	20.7	0.0	3.0	4	0	0	4	4	4	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|557694830|ref|YP_008797884.1|	-	0.00039	19.8	0.0	0.0015	17.9	0.0	1.9	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|557694830|ref|YP_008797884.1|	-	0.001	19.4	2.5	0.011	16.0	1.7	3.0	1	1	0	1	1	1	1	ABC	transporter
AAA_25	PF13481.1	gi|557694830|ref|YP_008797884.1|	-	0.01	15.2	0.7	0.042	13.2	0.0	2.3	3	1	0	3	3	3	0	AAA	domain
DUF258	PF03193.11	gi|557694830|ref|YP_008797884.1|	-	0.075	12.2	0.0	0.22	10.7	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DUF310	PF03750.8	gi|557694830|ref|YP_008797884.1|	-	0.11	12.6	2.6	0.45	10.7	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF310)
AAA_13	PF13166.1	gi|557694830|ref|YP_008797884.1|	-	0.15	10.5	12.3	1.7	7.0	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
ApoLp-III	PF07464.6	gi|557694830|ref|YP_008797884.1|	-	0.18	11.8	0.2	0.18	11.8	0.1	2.7	3	0	0	3	3	3	0	Apolipophorin-III	precursor	(apoLp-III)
Spc7	PF08317.6	gi|557694830|ref|YP_008797884.1|	-	0.45	9.1	11.0	0.63	8.6	2.9	2.4	2	1	0	2	2	2	0	Spc7	kinetochore	protein
DUF4618	PF15397.1	gi|557694830|ref|YP_008797884.1|	-	1.3	8.2	10.9	0.66	9.2	2.0	3.3	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4618)
V_ATPase_I	PF01496.14	gi|557694830|ref|YP_008797884.1|	-	4.3	5.0	10.5	3	5.5	0.1	2.1	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
AAA_17	PF13207.1	gi|557694830|ref|YP_008797884.1|	-	4.6	8.0	9.7	2.5e+02	2.4	4.9	3.0	2	1	0	2	2	1	0	AAA	domain
AAA_10	PF12846.2	gi|557694830|ref|YP_008797884.1|	-	5.9	6.2	6.5	15	4.9	3.0	2.6	1	1	1	2	2	2	0	AAA-like	domain
DMPK_coil	PF08826.5	gi|557694830|ref|YP_008797884.1|	-	9.9	6.1	23.6	3.1	7.7	0.4	3.9	4	0	0	4	4	4	0	DMPK	coiled	coil	domain	like
CHAD	PF05235.9	gi|557694831|ref|YP_008797885.1|	-	0.044	13.3	2.5	1.2	8.6	0.4	2.1	1	1	1	2	2	2	0	CHAD	domain
SMC_Nse1	PF07574.8	gi|557694832|ref|YP_008797886.1|	-	0.00041	20.0	0.0	0.28	10.7	0.0	2.2	1	1	1	2	2	2	2	Nse1	non-SMC	component	of	SMC5-6	complex
DUF1018	PF06252.7	gi|557694832|ref|YP_008797886.1|	-	0.054	14.0	0.2	0.15	12.5	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1018)
DEAD	PF00270.24	gi|557694833|ref|YP_008797887.1|	-	1.9e-30	105.5	0.0	1.1e-29	103.1	0.0	2.1	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|557694833|ref|YP_008797887.1|	-	2.2e-29	102.5	8.2	5.1e-29	101.3	0.2	4.0	4	0	0	4	4	4	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|557694833|ref|YP_008797887.1|	-	7.5e-12	44.9	0.1	2.9e-11	43.0	0.0	2.0	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|557694833|ref|YP_008797887.1|	-	2.9e-07	30.5	0.0	1e-06	28.7	0.0	1.9	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.18	gi|557694833|ref|YP_008797887.1|	-	6.4e-06	25.1	0.0	1.5e-05	23.9	0.0	1.5	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
DUF3936	PF13072.1	gi|557694833|ref|YP_008797887.1|	-	0.05	13.0	0.1	0.12	11.8	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3936)
UvrD-helicase	PF00580.16	gi|557694833|ref|YP_008797887.1|	-	0.12	11.7	0.0	0.29	10.4	0.0	1.6	1	0	0	1	1	1	0	UvrD/REP	helicase	N-terminal	domain
zf-ribbon_3	PF13248.1	gi|557694834|ref|YP_008797888.1|	-	3.7e-06	25.9	1.0	5.6e-06	25.3	0.7	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|557694834|ref|YP_008797888.1|	-	0.00016	21.3	0.3	0.00027	20.6	0.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|557694834|ref|YP_008797888.1|	-	0.00068	19.0	0.9	0.0011	18.3	0.7	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
Grp1_Fun34_YaaH	PF01184.14	gi|557694834|ref|YP_008797888.1|	-	0.0041	16.4	1.8	0.0041	16.4	1.3	1.4	2	0	0	2	2	2	1	GPR1/FUN34/yaaH	family
UPF0547	PF10571.4	gi|557694834|ref|YP_008797888.1|	-	0.0078	15.8	3.4	0.013	15.1	2.3	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
NOB1_Zn_bind	PF08772.6	gi|557694834|ref|YP_008797888.1|	-	0.013	15.3	0.6	0.021	14.6	0.4	1.2	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-DHHC	PF01529.15	gi|557694834|ref|YP_008797888.1|	-	0.021	14.2	0.5	0.021	14.2	0.4	1.6	1	1	0	2	2	2	0	DHHC	palmitoyltransferase
zf-C4H2	PF10146.4	gi|557694834|ref|YP_008797888.1|	-	0.037	14.0	0.0	0.037	14.0	0.0	1.2	1	0	0	1	1	1	0	Zinc	finger-containing	protein
DNA_ligase_ZBD	PF03119.11	gi|557694834|ref|YP_008797888.1|	-	0.039	13.6	0.1	0.078	12.6	0.1	1.5	1	0	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Cript	PF10235.4	gi|557694834|ref|YP_008797888.1|	-	0.1	12.9	0.1	0.16	12.2	0.0	1.4	1	0	0	1	1	1	0	Microtubule-associated	protein	CRIPT
zf-IS66	PF13005.2	gi|557694834|ref|YP_008797888.1|	-	0.11	12.4	0.2	0.25	11.3	0.1	1.6	1	0	0	1	1	1	0	zinc-finger	binding	domain	of	transposase	IS66
DUF4131	PF13567.1	gi|557694834|ref|YP_008797888.1|	-	0.16	11.3	3.9	0.8	9.0	2.7	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF456	PF04306.8	gi|557694834|ref|YP_008797888.1|	-	0.98	9.4	8.9	0.062	13.3	2.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF456)
DUF533	PF04391.7	gi|557694834|ref|YP_008797888.1|	-	3.2	7.0	5.1	11	5.2	2.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF533)
DUF3995	PF13160.1	gi|557694834|ref|YP_008797888.1|	-	4.7	7.2	8.8	1.6	8.7	3.6	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3995)
Acyl-CoA_dh_1	PF00441.19	gi|557694835|ref|YP_008797889.1|	-	9.6e-44	149.1	3.9	1.3e-43	148.6	2.7	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|557694835|ref|YP_008797889.1|	-	8e-32	110.1	0.0	1.8e-31	109.0	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|557694835|ref|YP_008797889.1|	-	8.1e-20	70.0	0.4	1.5e-19	69.2	0.3	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|557694835|ref|YP_008797889.1|	-	6.2e-16	58.8	1.5	9.3e-16	58.2	1.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Clc-like	PF07062.7	gi|557694836|ref|YP_008797890.1|	-	0.19	10.9	2.3	0.25	10.5	1.6	1.2	1	0	0	1	1	1	0	Clc-like
PMT_2	PF13231.1	gi|557694836|ref|YP_008797890.1|	-	0.35	10.7	6.7	1.4	8.8	4.0	2.1	2	1	0	2	2	2	0	Dolichyl-phosphate-mannose-protein	mannosyltransferase
Cytochrom_B_N	PF00033.14	gi|557694836|ref|YP_008797890.1|	-	1	8.6	12.5	0.16	11.3	1.3	2.1	1	1	1	2	2	2	0	Cytochrome	b(N-terminal)/b6/petB
COX15-CtaA	PF02628.10	gi|557694836|ref|YP_008797890.1|	-	4.4	6.0	16.2	3.8	6.3	0.1	2.4	1	1	1	2	2	2	0	Cytochrome	oxidase	assembly	protein
Cpn60_TCP1	PF00118.19	gi|557694837|ref|YP_008797891.1|	-	2.6e-161	537.5	12.6	3e-161	537.3	8.7	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
CBFD_NFYB_HMF	PF00808.18	gi|557694838|ref|YP_008797892.1|	-	8.6e-16	57.7	0.9	1e-15	57.5	0.7	1.1	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.19	gi|557694838|ref|YP_008797892.1|	-	6.7e-11	42.1	0.2	7.5e-11	42.0	0.2	1.0	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
Ribosomal_L12	PF00542.14	gi|557694838|ref|YP_008797892.1|	-	0.044	13.7	1.6	0.28	11.2	0.1	2.2	1	1	1	2	2	2	0	Ribosomal	protein	L7/L12	C-terminal	domain
TAF	PF02969.12	gi|557694838|ref|YP_008797892.1|	-	0.051	13.5	0.5	0.062	13.2	0.4	1.2	1	0	0	1	1	1	0	TATA	box	binding	protein	associated	factor	(TAF)
TFIID-31kDa	PF02291.10	gi|557694838|ref|YP_008797892.1|	-	0.069	12.9	0.0	0.07	12.9	0.0	1.0	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	31kD	subunit
CENP-S	PF15630.1	gi|557694838|ref|YP_008797892.1|	-	0.075	13.2	0.1	0.087	13.0	0.0	1.2	1	0	0	1	1	1	0	Kinetochore	component	CENP-S
zf-ribbon_3	PF13248.1	gi|557694839|ref|YP_008797893.1|	-	0.00034	19.7	0.5	0.00059	18.9	0.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
GvpG	PF05120.7	gi|557694839|ref|YP_008797893.1|	-	0.011	15.4	6.7	1.5	8.6	0.1	3.0	2	1	0	2	2	2	0	Gas	vesicle	protein	G
DZR	PF12773.2	gi|557694839|ref|YP_008797893.1|	-	0.02	14.6	0.4	0.038	13.8	0.3	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
Baculo_PEP_C	PF04513.7	gi|557694839|ref|YP_008797893.1|	-	0.022	14.5	0.1	3.2	7.5	0.1	2.2	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
HR1	PF02185.11	gi|557694839|ref|YP_008797893.1|	-	0.064	13.0	0.3	0.064	13.0	0.2	4.1	4	1	1	5	5	5	0	Hr1	repeat
zf-Dof	PF02701.10	gi|557694839|ref|YP_008797893.1|	-	0.066	13.1	0.2	0.11	12.4	0.2	1.3	1	0	0	1	1	1	0	Dof	domain,	zinc	finger
LXG	PF04740.7	gi|557694839|ref|YP_008797893.1|	-	0.12	12.1	5.6	2.4	7.8	0.1	2.3	2	0	0	2	2	2	0	LXG	domain	of	WXG	superfamily
DUF1664	PF07889.7	gi|557694839|ref|YP_008797893.1|	-	0.27	11.0	5.3	0.53	10.0	1.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Spc7	PF08317.6	gi|557694839|ref|YP_008797893.1|	-	0.69	8.5	13.6	0.096	11.3	4.9	2.0	1	1	1	2	2	2	0	Spc7	kinetochore	protein
DUF342	PF03961.8	gi|557694839|ref|YP_008797893.1|	-	0.79	8.0	11.7	1.6	7.0	0.3	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF342)
zinc_ribbon_2	PF13240.1	gi|557694839|ref|YP_008797893.1|	-	0.89	9.1	8.1	6	6.4	5.6	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
Syntaxin-6_N	PF09177.6	gi|557694839|ref|YP_008797893.1|	-	1	9.8	6.9	0.82	10.1	0.4	2.8	2	1	1	3	3	3	0	Syntaxin	6,	N-terminal
DUF1003	PF06210.6	gi|557694839|ref|YP_008797893.1|	-	1.1	9.2	4.3	0.88	9.5	0.4	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1003)
DUF2387	PF09526.5	gi|557694839|ref|YP_008797893.1|	-	1.3	8.9	3.4	16	5.5	2.4	2.6	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
CCDC-167	PF15188.1	gi|557694839|ref|YP_008797893.1|	-	2.3	8.2	13.5	0.14	12.1	1.0	3.1	2	2	1	3	3	3	0	Coiled-coil	domain-containing	protein	167
SHOCT	PF09851.4	gi|557694839|ref|YP_008797893.1|	-	2.3	7.8	15.2	1.4	8.5	4.3	3.6	3	0	0	3	3	3	0	Short	C-terminal	domain
Prefoldin	PF02996.12	gi|557694839|ref|YP_008797893.1|	-	2.3	7.8	10.4	12	5.6	1.3	3.5	3	1	0	3	3	3	0	Prefoldin	subunit
Spectrin	PF00435.16	gi|557694839|ref|YP_008797893.1|	-	5.2	7.4	14.6	7.7	6.8	2.6	3.4	3	1	0	3	3	3	0	Spectrin	repeat
Prefoldin_2	PF01920.15	gi|557694839|ref|YP_008797893.1|	-	5.5	6.7	19.9	0.58	9.9	0.3	3.9	3	1	1	4	4	4	0	Prefoldin	subunit
DUF16	PF01519.11	gi|557694839|ref|YP_008797893.1|	-	8.8	6.6	13.8	1.8e+02	2.4	9.5	2.6	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
DUF947	PF06102.7	gi|557694839|ref|YP_008797893.1|	-	8.9	6.0	14.8	0.19	11.5	1.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF947)
AAA_18	PF13238.1	gi|557694840|ref|YP_008797894.1|	-	1e-13	51.7	0.0	1.5e-13	51.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|557694840|ref|YP_008797894.1|	-	1.4e-07	32.3	0.0	2e-07	31.8	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|557694840|ref|YP_008797894.1|	-	2.4e-07	30.7	0.0	6.5e-07	29.3	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.1	gi|557694840|ref|YP_008797894.1|	-	2.8e-05	23.7	0.1	4.1e-05	23.2	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|557694840|ref|YP_008797894.1|	-	6e-05	22.3	0.1	6.7e-05	22.2	0.0	1.1	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.10	gi|557694840|ref|YP_008797894.1|	-	0.0012	18.6	0.3	0.0025	17.5	0.1	1.7	2	0	0	2	2	2	1	NTPase
AAA_19	PF13245.1	gi|557694840|ref|YP_008797894.1|	-	0.0017	18.0	1.3	0.0036	17.0	0.3	1.9	2	0	0	2	2	1	1	Part	of	AAA	domain
SKI	PF01202.17	gi|557694840|ref|YP_008797894.1|	-	0.0046	16.8	0.2	0.0098	15.7	0.1	1.7	1	1	0	1	1	1	1	Shikimate	kinase
AAA	PF00004.24	gi|557694840|ref|YP_008797894.1|	-	0.0053	16.9	0.5	0.019	15.1	0.4	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Thymidylate_kin	PF02223.12	gi|557694840|ref|YP_008797894.1|	-	0.0062	15.9	0.0	0.89	8.8	0.0	2.3	2	0	0	2	2	2	1	Thymidylate	kinase
ADK	PF00406.17	gi|557694840|ref|YP_008797894.1|	-	0.0067	16.3	0.1	0.4	10.5	0.0	2.3	2	0	0	2	2	2	1	Adenylate	kinase
Zeta_toxin	PF06414.7	gi|557694840|ref|YP_008797894.1|	-	0.011	14.7	0.2	0.027	13.5	0.0	1.7	2	0	0	2	2	2	0	Zeta	toxin
NB-ARC	PF00931.17	gi|557694840|ref|YP_008797894.1|	-	0.014	14.2	0.1	0.034	12.9	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
DUF134	PF02001.11	gi|557694840|ref|YP_008797894.1|	-	0.014	15.2	0.1	0.14	12.0	0.0	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF134
AAA_22	PF13401.1	gi|557694840|ref|YP_008797894.1|	-	0.017	15.2	0.1	0.032	14.3	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.13	gi|557694840|ref|YP_008797894.1|	-	0.024	14.1	0.0	0.034	13.6	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_28	PF13521.1	gi|557694840|ref|YP_008797894.1|	-	0.041	13.8	0.0	0.074	13.0	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|557694840|ref|YP_008797894.1|	-	0.051	13.0	0.1	0.11	11.9	0.0	1.6	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
GCD14	PF08704.5	gi|557694841|ref|YP_008797895.1|	-	4.5e-36	124.6	0.0	4.2e-35	121.4	0.0	1.9	1	1	1	2	2	2	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.1	gi|557694841|ref|YP_008797895.1|	-	4.4e-08	32.8	0.0	5.6e-08	32.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557694841|ref|YP_008797895.1|	-	2.6e-07	31.2	0.0	4.6e-07	30.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|557694841|ref|YP_008797895.1|	-	3.3e-06	27.1	0.0	1e-05	25.4	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|557694841|ref|YP_008797895.1|	-	3.7e-05	23.3	0.0	5.2e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|557694841|ref|YP_008797895.1|	-	9.7e-05	21.8	0.0	0.00013	21.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_24	PF13578.1	gi|557694841|ref|YP_008797895.1|	-	0.0002	22.1	0.0	0.00038	21.2	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|557694841|ref|YP_008797895.1|	-	0.0004	20.8	0.0	0.0016	18.8	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|557694841|ref|YP_008797895.1|	-	0.0052	16.4	0.0	0.007	16.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|557694841|ref|YP_008797895.1|	-	0.021	14.4	0.0	0.031	13.8	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Ubie_methyltran	PF01209.13	gi|557694841|ref|YP_008797895.1|	-	0.031	13.4	0.0	0.047	12.7	0.0	1.3	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.1	gi|557694841|ref|YP_008797895.1|	-	0.035	14.4	0.0	0.059	13.7	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|557694841|ref|YP_008797895.1|	-	0.053	13.2	0.0	1.2	8.8	0.0	2.2	1	1	0	1	1	1	0	Methyltransferase	domain
VP9	PF09625.5	gi|557694841|ref|YP_008797895.1|	-	0.059	13.1	0.0	1.7	8.4	0.0	2.4	2	0	0	2	2	2	0	VP9	protein
Peptidase_M10	PF00413.19	gi|557694842|ref|YP_008797896.1|	-	1.1e-06	28.4	0.1	5.3e-06	26.2	0.1	2.0	1	1	1	2	2	2	1	Matrixin
Reprolysin_4	PF13583.1	gi|557694842|ref|YP_008797896.1|	-	0.0009	18.8	0.0	0.0015	18.0	0.0	1.3	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_2	PF13574.1	gi|557694842|ref|YP_008797896.1|	-	0.0082	16.2	0.0	0.017	15.1	0.0	1.5	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Zn_peptidase_2	PF04298.7	gi|557694842|ref|YP_008797896.1|	-	0.018	14.4	0.1	0.036	13.4	0.1	1.4	1	0	0	1	1	1	0	Putative	neutral	zinc	metallopeptidase
Reprolysin_3	PF13582.1	gi|557694842|ref|YP_008797896.1|	-	0.038	14.5	0.1	0.072	13.6	0.0	1.4	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_5	PF13688.1	gi|557694842|ref|YP_008797896.1|	-	0.041	13.8	0.0	0.069	13.0	0.0	1.3	1	0	0	1	1	1	0	Metallo-peptidase	family	M12
Chorismate_synt	PF01264.16	gi|557694843|ref|YP_008797897.1|	-	2.8e-144	479.8	0.0	3.2e-144	479.6	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
Plug	PF07715.10	gi|557694843|ref|YP_008797897.1|	-	0.057	13.7	0.5	0.2	12.0	0.0	2.1	3	0	0	3	3	3	0	TonB-dependent	Receptor	Plug	Domain
Nfu_N	PF08712.6	gi|557694843|ref|YP_008797897.1|	-	0.17	11.4	0.0	0.35	10.5	0.0	1.4	1	0	0	1	1	1	0	Scaffold	protein	Nfu/NifU	N	terminal
Pterin_4a	PF01329.14	gi|557694844|ref|YP_008797898.1|	-	1.4e-28	98.4	0.0	1.6e-28	98.2	0.0	1.0	1	0	0	1	1	1	1	Pterin	4	alpha	carbinolamine	dehydratase
PhoU	PF01895.14	gi|557694845|ref|YP_008797899.1|	-	2e-23	82.6	8.6	5e-19	68.5	1.0	2.2	2	0	0	2	2	2	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|557694845|ref|YP_008797899.1|	-	6e-05	22.6	0.1	0.00013	21.6	0.1	1.6	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF2682	PF10909.3	gi|557694845|ref|YP_008797899.1|	-	0.003	17.8	0.4	0.0083	16.3	0.3	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2682)
BLOC1_2	PF10046.4	gi|557694845|ref|YP_008797899.1|	-	0.015	15.4	1.3	0.031	14.3	0.1	2.0	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
IGPD	PF00475.13	gi|557694845|ref|YP_008797899.1|	-	0.058	13.2	0.1	6.3	6.6	0.0	2.3	1	1	1	2	2	2	0	Imidazoleglycerol-phosphate	dehydratase
DUF86	PF01934.12	gi|557694845|ref|YP_008797899.1|	-	0.42	10.2	3.7	46	3.6	0.2	4.4	3	1	1	4	4	4	0	Protein	of	unknown	function	DUF86
PBP_like_2	PF12849.2	gi|557694846|ref|YP_008797900.1|	-	2.7e-36	125.4	0.1	6e-36	124.3	0.0	1.4	1	1	0	1	1	1	1	PBP	superfamily	domain
PBP_like	PF12727.2	gi|557694846|ref|YP_008797900.1|	-	5.6e-24	84.1	0.0	5.4e-23	80.9	0.0	2.1	2	0	0	2	2	2	1	PBP	superfamily	domain
BPD_transp_1	PF00528.17	gi|557694847|ref|YP_008797901.1|	-	1.2e-19	70.5	19.2	1.2e-19	70.5	13.3	2.2	1	1	1	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|557694848|ref|YP_008797902.1|	-	1.9e-20	73.1	15.3	2.6e-20	72.7	10.6	1.1	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|557694849|ref|YP_008797903.1|	-	4.8e-32	111.1	0.0	6.9e-32	110.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694849|ref|YP_008797903.1|	-	6.4e-17	62.4	0.0	1.2e-09	38.5	0.0	2.2	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694849|ref|YP_008797903.1|	-	1.3e-10	40.8	0.8	9.5e-05	21.7	0.1	2.7	2	1	1	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|557694849|ref|YP_008797903.1|	-	3.2e-08	33.0	0.1	0.0015	17.6	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|557694849|ref|YP_008797903.1|	-	8.2e-07	29.2	0.0	2.2e-06	27.8	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|557694849|ref|YP_008797903.1|	-	1.5e-06	28.3	0.3	1.1e-05	25.5	0.2	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_23	PF13476.1	gi|557694849|ref|YP_008797903.1|	-	5.4e-06	26.8	0.0	1.5e-05	25.4	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|557694849|ref|YP_008797903.1|	-	4.6e-05	22.6	0.0	0.0001	21.5	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|557694849|ref|YP_008797903.1|	-	4.7e-05	23.2	0.2	9.3e-05	22.2	0.2	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|557694849|ref|YP_008797903.1|	-	0.00028	20.3	0.0	0.00071	19.0	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Adeno_IVa2	PF02456.10	gi|557694849|ref|YP_008797903.1|	-	0.0024	16.6	0.0	0.014	14.0	0.0	1.9	2	0	0	2	2	2	1	Adenovirus	IVa2	protein
AAA_10	PF12846.2	gi|557694849|ref|YP_008797903.1|	-	0.0026	17.2	0.1	0.0097	15.3	0.0	1.8	1	1	1	2	2	2	1	AAA-like	domain
AAA_19	PF13245.1	gi|557694849|ref|YP_008797903.1|	-	0.003	17.2	0.0	0.11	12.3	0.0	2.3	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_13	PF13166.1	gi|557694849|ref|YP_008797903.1|	-	0.0036	15.8	0.1	1.1	7.6	0.1	2.2	2	0	0	2	2	2	2	AAA	domain
Rad17	PF03215.10	gi|557694849|ref|YP_008797903.1|	-	0.0075	15.0	0.0	0.013	14.1	0.0	1.3	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_17	PF13207.1	gi|557694849|ref|YP_008797903.1|	-	0.0093	16.7	0.8	0.035	14.9	0.6	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|557694849|ref|YP_008797903.1|	-	0.014	15.2	0.1	0.066	13.1	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.1	gi|557694849|ref|YP_008797903.1|	-	0.032	14.1	0.0	0.43	10.5	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
YflT	PF11181.3	gi|557694849|ref|YP_008797903.1|	-	0.032	14.3	0.1	2.8	8.1	0.0	2.2	2	0	0	2	2	2	0	Heat	induced	stress	protein	YflT
AAA_18	PF13238.1	gi|557694849|ref|YP_008797903.1|	-	0.042	14.1	0.0	0.12	12.7	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
PduV-EutP	PF10662.4	gi|557694849|ref|YP_008797903.1|	-	0.044	13.2	0.3	0.62	9.5	0.0	2.6	2	1	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_30	PF13604.1	gi|557694849|ref|YP_008797903.1|	-	0.048	13.2	0.1	0.89	9.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|557694849|ref|YP_008797903.1|	-	0.06	13.3	0.3	0.19	11.6	0.2	2.1	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
NACHT	PF05729.7	gi|557694849|ref|YP_008797903.1|	-	0.06	13.0	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
MutS_V	PF00488.16	gi|557694849|ref|YP_008797903.1|	-	0.063	12.6	0.0	0.11	11.8	0.0	1.4	1	0	0	1	1	1	0	MutS	domain	V
AAA	PF00004.24	gi|557694849|ref|YP_008797903.1|	-	0.07	13.3	0.1	0.48	10.6	0.1	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|557694849|ref|YP_008797903.1|	-	0.095	12.0	0.0	0.6	9.4	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.17	gi|557694849|ref|YP_008797903.1|	-	0.1	11.4	0.0	0.19	10.5	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
RNA_helicase	PF00910.17	gi|557694849|ref|YP_008797903.1|	-	0.11	12.7	0.0	0.27	11.4	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
AAA_28	PF13521.1	gi|557694849|ref|YP_008797903.1|	-	0.11	12.3	0.0	0.33	10.8	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|557694849|ref|YP_008797903.1|	-	0.12	12.1	0.1	0.37	10.4	0.0	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|557694849|ref|YP_008797903.1|	-	0.13	12.1	0.0	0.37	10.6	0.0	1.7	2	1	0	2	2	2	0	AAA	domain
PhoU	PF01895.14	gi|557694850|ref|YP_008797904.1|	-	3.4e-25	88.2	0.5	2.9e-14	53.2	0.4	2.1	2	0	0	2	2	2	2	PhoU	domain
Pil1	PF13805.1	gi|557694850|ref|YP_008797904.1|	-	0.074	12.1	0.1	0.14	11.2	0.0	1.4	1	1	0	1	1	1	0	Eisosome	component	PIL1
DUF972	PF06156.8	gi|557694850|ref|YP_008797904.1|	-	0.14	12.5	1.0	0.44	10.9	0.4	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
Phasin	PF05597.6	gi|557694850|ref|YP_008797904.1|	-	0.2	11.4	2.5	10	5.9	0.0	2.2	2	0	0	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
Prok-JAB	PF14464.1	gi|557694851|ref|YP_008797905.1|	-	3.3e-10	39.4	0.0	4.5e-10	39.0	0.0	1.2	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
RadC	PF04002.10	gi|557694851|ref|YP_008797905.1|	-	0.011	15.4	0.1	0.021	14.5	0.1	1.5	1	0	0	1	1	1	0	RadC-like	JAB	domain
Toxin-JAB1	PF15659.1	gi|557694851|ref|YP_008797905.1|	-	0.078	12.8	0.1	0.095	12.5	0.1	1.2	1	0	0	1	1	1	0	JAB-like	toxin	1
TIM	PF00121.13	gi|557694852|ref|YP_008797906.1|	-	4.3e-34	117.6	0.1	6.9e-32	110.4	0.1	2.0	1	1	0	1	1	1	1	Triosephosphate	isomerase
ThiG	PF05690.9	gi|557694852|ref|YP_008797906.1|	-	7e-08	31.8	0.6	7e-08	31.8	0.4	1.6	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.10	gi|557694852|ref|YP_008797906.1|	-	1.4e-06	27.6	0.4	2.5e-06	26.9	0.3	1.3	1	0	0	1	1	1	1	Nitronate	monooxygenase
His_biosynth	PF00977.16	gi|557694852|ref|YP_008797906.1|	-	0.00019	20.7	0.3	0.00093	18.5	0.0	2.1	3	0	0	3	3	3	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.13	gi|557694852|ref|YP_008797906.1|	-	0.00055	18.8	0.2	0.00097	18.0	0.1	1.4	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
DUF711	PF05167.7	gi|557694852|ref|YP_008797906.1|	-	0.0019	17.0	0.5	0.039	12.6	0.0	2.2	1	1	1	2	2	2	1	Uncharacterised	ACR	(DUF711)
IGPS	PF00218.16	gi|557694852|ref|YP_008797906.1|	-	0.0039	16.2	0.0	0.0055	15.7	0.0	1.3	1	1	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
PcrB	PF01884.12	gi|557694852|ref|YP_008797906.1|	-	0.081	12.1	0.1	0.13	11.4	0.1	1.3	1	1	0	1	1	1	0	PcrB	family
FlpD	PF02662.11	gi|557694852|ref|YP_008797906.1|	-	0.14	11.9	0.3	1.1	8.9	0.0	2.3	2	0	0	2	2	2	0	Methyl-viologen-reducing	hydrogenase,	delta	subunit
GDC-P	PF02347.11	gi|557694853|ref|YP_008797907.1|	-	2.1e-113	379.2	0.0	2.5e-113	378.9	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|557694853|ref|YP_008797907.1|	-	5.7e-08	31.8	0.0	9.4e-08	31.1	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|557694853|ref|YP_008797907.1|	-	1.6e-05	23.4	0.0	2.9e-05	22.5	0.0	1.4	2	0	0	2	2	2	1	Cys/Met	metabolism	PLP-dependent	enzyme
DNA_pol_A_exo1	PF01612.15	gi|557694853|ref|YP_008797907.1|	-	0.034	13.6	0.1	0.3	10.5	0.0	2.2	2	0	0	2	2	2	0	3'-5'	exonuclease
GDC-P	PF02347.11	gi|557694854|ref|YP_008797908.1|	-	9.6e-18	64.0	0.0	2.3e-17	62.8	0.0	1.5	2	0	0	2	2	2	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|557694854|ref|YP_008797908.1|	-	9.6e-06	24.5	0.0	1.4e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|557694854|ref|YP_008797908.1|	-	5.3e-05	22.5	0.0	7.3e-05	22.0	0.0	1.3	1	1	0	1	1	1	1	Beta-eliminating	lyase
GCV_T	PF01571.16	gi|557694855|ref|YP_008797909.1|	-	4.6e-61	205.8	0.0	8.5e-61	204.9	0.0	1.4	2	0	0	2	2	2	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|557694855|ref|YP_008797909.1|	-	3.3e-21	75.0	0.1	6.6e-21	74.1	0.0	1.4	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
TrmE_N	PF10396.4	gi|557694855|ref|YP_008797909.1|	-	0.0033	17.3	0.0	0.07	13.1	0.0	2.4	2	0	0	2	2	2	1	GTP-binding	protein	TrmE	N-terminus
tRNA_anti-codon	PF01336.20	gi|557694857|ref|YP_008797911.1|	-	8.9e-07	28.6	1.5	2.2e-06	27.4	1.0	1.7	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
ETF	PF01012.16	gi|557694858|ref|YP_008797912.1|	-	2.4e-13	50.1	0.0	7.2e-07	29.0	0.0	3.2	2	1	0	2	2	2	2	Electron	transfer	flavoprotein	domain
AF0941-like	PF14591.1	gi|557694858|ref|YP_008797912.1|	-	0.038	14.0	0.1	0.11	12.5	0.1	1.8	1	0	0	1	1	1	0	AF0941-like
ETF	PF01012.16	gi|557694859|ref|YP_008797913.1|	-	1.6e-28	99.4	0.0	2.4e-28	98.8	0.0	1.3	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.14	gi|557694859|ref|YP_008797913.1|	-	1.8e-20	72.3	2.2	3.8e-20	71.3	0.8	2.0	2	1	0	2	2	2	1	Electron	transfer	flavoprotein	FAD-binding	domain
DAO	PF01266.19	gi|557694860|ref|YP_008797914.1|	-	7.2e-20	71.1	0.1	1.5e-19	70.1	0.1	1.5	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|557694860|ref|YP_008797914.1|	-	4.4e-12	45.3	0.1	1.6e-06	27.0	0.0	2.2	2	0	0	2	2	2	2	Tryptophan	halogenase
FAD_oxidored	PF12831.2	gi|557694860|ref|YP_008797914.1|	-	4.8e-11	42.3	0.0	8.6e-11	41.5	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|557694860|ref|YP_008797914.1|	-	1.5e-09	37.2	2.6	2.8e-08	33.0	0.5	2.7	3	0	0	3	3	3	1	FAD	binding	domain
Thi4	PF01946.12	gi|557694860|ref|YP_008797914.1|	-	7.5e-09	35.0	1.4	4e-07	29.3	0.3	2.3	2	0	0	2	2	2	1	Thi4	family
FAD_binding_3	PF01494.14	gi|557694860|ref|YP_008797914.1|	-	1.5e-07	30.8	0.2	6.7e-07	28.6	0.2	1.9	1	1	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|557694860|ref|YP_008797914.1|	-	2.7e-07	30.5	0.8	7.6e-07	29.0	0.5	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|557694860|ref|YP_008797914.1|	-	3e-07	29.2	0.5	2.3e-06	26.3	0.2	2.0	2	0	0	2	2	2	1	HI0933-like	protein
GIDA	PF01134.17	gi|557694860|ref|YP_008797914.1|	-	6.4e-07	28.5	0.4	2.4e-05	23.3	0.3	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Pyr_redox_2	PF07992.9	gi|557694860|ref|YP_008797914.1|	-	4.1e-06	26.8	0.3	1.4e-05	25.1	0.2	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|557694860|ref|YP_008797914.1|	-	2.1e-05	24.6	0.7	0.0029	17.6	0.5	2.6	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|557694860|ref|YP_008797914.1|	-	9.9e-05	21.4	0.3	0.002	17.1	0.2	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
GDI	PF00996.13	gi|557694860|ref|YP_008797914.1|	-	0.0042	15.4	0.0	2.6	6.2	0.0	2.7	3	0	0	3	3	3	2	GDP	dissociation	inhibitor
ThiF	PF00899.16	gi|557694860|ref|YP_008797914.1|	-	0.025	14.4	0.0	0.078	12.8	0.0	1.8	1	0	0	1	1	1	0	ThiF	family
3HCDH_N	PF02737.13	gi|557694860|ref|YP_008797914.1|	-	0.051	13.2	0.7	0.096	12.3	0.0	1.8	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|557694860|ref|YP_008797914.1|	-	0.077	13.2	0.0	0.17	12.1	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
NAD_binding_9	PF13454.1	gi|557694860|ref|YP_008797914.1|	-	0.11	12.2	0.5	0.24	11.1	0.1	1.8	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Pyr_redox	PF00070.22	gi|557694860|ref|YP_008797914.1|	-	0.45	10.9	0.1	0.45	10.9	0.1	2.2	2	0	0	2	2	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Rhodanese	PF00581.15	gi|557694861|ref|YP_008797915.1|	-	1.1e-43	148.1	0.0	1.6e-24	86.4	0.0	2.1	2	0	0	2	2	2	2	Rhodanese-like	domain
GCV_H	PF01597.14	gi|557694862|ref|YP_008797916.1|	-	3.4e-12	46.0	0.0	5.6e-12	45.4	0.0	1.3	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
TusA	PF01206.12	gi|557694862|ref|YP_008797916.1|	-	1e-06	28.2	0.0	2.5e-06	26.9	0.0	1.6	1	0	0	1	1	1	1	Sulfurtransferase	TusA
tRNA_int_endo	PF01974.12	gi|557694863|ref|YP_008797917.1|	-	4.6e-25	87.2	0.0	8.6e-25	86.3	0.0	1.4	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|557694863|ref|YP_008797917.1|	-	1.9e-18	65.7	0.4	4.3e-18	64.6	0.0	1.7	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	N-terminal	domain
PhoU_div	PF01865.11	gi|557694864|ref|YP_008797918.1|	-	2e-19	69.6	12.9	2.8e-19	69.1	8.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|557694864|ref|YP_008797918.1|	-	8.1e-07	29.4	12.3	0.00042	20.7	1.7	2.4	2	0	0	2	2	2	2	PhoU	domain
priB_priC	PF07445.7	gi|557694864|ref|YP_008797918.1|	-	0.59	9.5	5.7	0.47	9.9	0.1	2.5	2	1	0	2	2	2	0	Primosomal	replication	protein	priB	and	priC
cwf21	PF08312.7	gi|557694864|ref|YP_008797918.1|	-	4.4	7.2	8.0	34	4.4	1.2	3.7	2	1	0	2	2	2	0	cwf21	domain
NTP_transf_3	PF12804.2	gi|557694865|ref|YP_008797919.1|	-	3.2e-28	98.8	0.2	4.1e-28	98.4	0.1	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
S_layer_C	PF05124.7	gi|557694866|ref|YP_008797920.1|	-	1e-07	31.8	0.0	1.5e-07	31.2	0.0	1.2	1	0	0	1	1	1	1	S-layer	like	family,	C-terminal	region
MarR_2	PF12802.2	gi|557694866|ref|YP_008797920.1|	-	9.4e-06	25.2	0.0	2.6e-05	23.7	0.0	1.7	1	0	0	1	1	1	1	MarR	family
HTH_29	PF13551.1	gi|557694866|ref|YP_008797920.1|	-	0.00097	19.2	0.1	0.0019	18.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_24	PF13412.1	gi|557694866|ref|YP_008797920.1|	-	0.0056	16.0	0.0	0.073	12.4	0.0	2.3	1	1	1	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|557694866|ref|YP_008797920.1|	-	0.02	14.7	0.0	0.042	13.6	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
EF-hand_5	PF13202.1	gi|557694866|ref|YP_008797920.1|	-	0.12	11.7	1.2	0.26	10.7	0.9	1.5	1	0	0	1	1	1	0	EF	hand
SIS	PF01380.17	gi|557694867|ref|YP_008797921.1|	-	7.9e-44	148.4	0.1	3.5e-23	81.6	0.1	2.8	3	0	0	3	3	3	2	SIS	domain
GATase_6	PF13522.1	gi|557694867|ref|YP_008797921.1|	-	1.7e-20	73.3	0.0	3.1e-20	72.4	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|557694867|ref|YP_008797921.1|	-	3.9e-18	65.2	1.3	1.4e-13	50.3	0.0	2.9	2	1	1	3	3	3	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|557694867|ref|YP_008797921.1|	-	2.3e-16	59.6	0.0	3.7e-16	59.0	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
SIS_2	PF13580.1	gi|557694867|ref|YP_008797921.1|	-	2.9e-05	23.8	0.1	0.22	11.2	0.0	3.4	3	1	1	4	4	4	2	SIS	domain
GATase_4	PF13230.1	gi|557694867|ref|YP_008797921.1|	-	0.00035	19.3	0.0	0.00068	18.4	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
EVE	PF01878.13	gi|557694868|ref|YP_008797922.1|	-	2.2e-07	31.0	0.0	2.5e-07	30.8	0.0	1.1	1	0	0	1	1	1	1	EVE	domain
Glu_synthase	PF01645.12	gi|557694869|ref|YP_008797923.1|	-	1.2e-19	70.4	0.0	3.2e-19	69.1	0.0	1.6	1	1	0	1	1	1	1	Conserved	region	in	glutamate	synthase
FMN_dh	PF01070.13	gi|557694869|ref|YP_008797923.1|	-	3.4e-19	68.8	0.8	8.8e-13	47.8	0.3	2.1	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
NMO	PF03060.10	gi|557694869|ref|YP_008797923.1|	-	0.0013	17.9	0.4	0.0019	17.3	0.3	1.2	1	0	0	1	1	1	1	Nitronate	monooxygenase
tRNA-synt_2	PF00152.15	gi|557694870|ref|YP_008797924.1|	-	2.4e-63	213.9	0.0	3.9e-63	213.2	0.0	1.3	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
DUF2365	PF10157.4	gi|557694871|ref|YP_008797925.1|	-	0.036	13.9	1.0	0.071	13.0	0.7	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2365)
DUF2217	PF10265.4	gi|557694871|ref|YP_008797925.1|	-	0.075	11.7	0.4	0.088	11.5	0.3	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2217)
DUF3294	PF07957.6	gi|557694871|ref|YP_008797925.1|	-	0.11	12.0	5.2	0.26	10.7	3.6	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3294)
RP-C_C	PF11800.3	gi|557694871|ref|YP_008797925.1|	-	0.18	11.4	4.6	0.33	10.6	3.2	1.4	1	1	0	1	1	1	0	Replication	protein	C	C-terminal	region
Gemini_AL2	PF01440.11	gi|557694871|ref|YP_008797925.1|	-	2.8	8.0	5.3	0.71	9.9	1.3	1.7	1	1	1	2	2	2	0	Geminivirus	AL2	protein
DUF308	PF03729.8	gi|557694872|ref|YP_008797926.1|	-	0.025	14.5	2.7	0.025	14.5	1.9	3.8	3	1	1	4	4	4	0	Short	repeat	of	unknown	function	(DUF308)
DUF2417	PF10329.4	gi|557694872|ref|YP_008797926.1|	-	0.12	11.7	0.1	0.12	11.7	0.1	2.4	2	1	0	2	2	2	0	Region	of	unknown	function	(DUF2417)
DUF4342	PF14242.1	gi|557694872|ref|YP_008797926.1|	-	3.3	7.5	5.1	0.61	9.9	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4342)
T2SE	PF00437.15	gi|557694873|ref|YP_008797927.1|	-	1.9e-48	164.7	0.0	2.8e-48	164.1	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|557694873|ref|YP_008797927.1|	-	0.0026	17.2	0.3	0.17	11.4	0.1	2.6	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
PCMT	PF01135.14	gi|557694873|ref|YP_008797927.1|	-	0.044	13.3	0.0	0.086	12.3	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF927	PF06048.6	gi|557694873|ref|YP_008797927.1|	-	0.055	12.7	0.1	0.1	11.8	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF927)
AAA_17	PF13207.1	gi|557694873|ref|YP_008797927.1|	-	0.087	13.6	0.0	1.1	10.0	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
KaiC	PF06745.8	gi|557694874|ref|YP_008797928.1|	-	4.7e-19	68.4	0.0	5.5e-19	68.1	0.0	1.0	1	0	0	1	1	1	1	KaiC
MutS_V	PF00488.16	gi|557694874|ref|YP_008797928.1|	-	1.1e-05	25.0	0.1	0.0034	16.8	0.0	2.1	2	0	0	2	2	2	2	MutS	domain	V
DUF835	PF05763.7	gi|557694874|ref|YP_008797928.1|	-	7.3e-05	22.3	0.0	0.00011	21.7	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
AAA_25	PF13481.1	gi|557694874|ref|YP_008797928.1|	-	0.00019	20.9	0.0	0.00031	20.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|557694874|ref|YP_008797928.1|	-	0.0015	18.4	0.2	0.046	13.6	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|557694874|ref|YP_008797928.1|	-	0.0051	16.9	0.0	0.012	15.7	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_35	PF14516.1	gi|557694874|ref|YP_008797928.1|	-	0.035	12.7	0.0	0.052	12.1	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
Arch_flagellin	PF01917.11	gi|557694876|ref|YP_008797930.1|	-	4e-05	23.3	0.1	0.0022	17.6	0.1	2.0	2	0	0	2	2	2	2	Archaebacterial	flagellin
Wzt_C	PF14524.1	gi|557694876|ref|YP_008797930.1|	-	0.12	12.0	0.0	0.21	11.2	0.0	1.5	1	0	0	1	1	1	0	Wzt	C-terminal	domain
DUF1192	PF06698.6	gi|557694877|ref|YP_008797931.1|	-	0.53	10.1	2.8	0.84	9.4	1.3	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
CENP-Q	PF13094.1	gi|557694877|ref|YP_008797931.1|	-	0.6	10.1	3.1	1.2	9.1	2.1	1.6	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Arch_flagellin	PF01917.11	gi|557694878|ref|YP_008797932.1|	-	2.3e-20	73.0	7.2	5.7e-20	71.7	5.0	1.6	1	1	0	1	1	1	1	Archaebacterial	flagellin
DUF4098	PF13345.1	gi|557694878|ref|YP_008797932.1|	-	0.41	10.6	7.6	5.5	7.0	1.5	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4098)
DUF3786	PF12654.2	gi|557694879|ref|YP_008797933.1|	-	1.2e-20	73.4	0.0	1.4e-20	73.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3786)
Cob_adeno_trans	PF01923.13	gi|557694880|ref|YP_008797934.1|	-	9.7e-41	139.2	0.0	1.2e-40	139.0	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
BPD_transp_2	PF02653.11	gi|557694881|ref|YP_008797935.1|	-	9.9e-43	146.0	28.1	1.3e-42	145.6	19.5	1.1	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Coa1	PF08695.5	gi|557694881|ref|YP_008797935.1|	-	0.03	13.8	0.1	0.086	12.3	0.0	1.7	1	0	0	1	1	1	0	Cytochrome	oxidase	complex	assembly	protein	1
BPD_transp_2	PF02653.11	gi|557694882|ref|YP_008797936.1|	-	3.8e-39	134.2	33.6	4.5e-39	134.0	23.3	1.1	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Peripla_BP_6	PF13458.1	gi|557694883|ref|YP_008797937.1|	-	8.5e-33	114.1	1.4	1.2e-32	113.6	1.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
ANF_receptor	PF01094.23	gi|557694883|ref|YP_008797937.1|	-	2.2e-20	72.7	0.1	3.6e-20	72.0	0.0	1.3	1	0	0	1	1	1	1	Receptor	family	ligand	binding	region
Peripla_BP_5	PF13433.1	gi|557694883|ref|YP_008797937.1|	-	1.4e-07	30.6	0.1	4.6e-07	28.9	0.0	1.8	1	1	0	1	1	1	1	Periplasmic	binding	protein	domain
ABC_tran	PF00005.22	gi|557694884|ref|YP_008797938.1|	-	1e-25	90.6	0.0	1.3e-25	90.3	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694884|ref|YP_008797938.1|	-	1.6e-09	38.1	0.1	3.1e-07	30.6	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
BCA_ABC_TP_C	PF12399.3	gi|557694884|ref|YP_008797938.1|	-	4.8e-06	26.1	0.0	1e-05	25.0	0.0	1.5	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_29	PF13555.1	gi|557694884|ref|YP_008797938.1|	-	1.5e-05	24.4	0.1	2.8e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|557694884|ref|YP_008797938.1|	-	3.2e-05	23.1	0.0	0.049	12.6	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|557694884|ref|YP_008797938.1|	-	0.0017	18.7	0.7	0.0033	17.7	0.5	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|557694884|ref|YP_008797938.1|	-	0.0026	17.2	1.4	0.15	11.4	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|557694884|ref|YP_008797938.1|	-	0.003	16.7	0.1	0.0049	16.0	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|557694884|ref|YP_008797938.1|	-	0.0032	17.5	0.5	0.022	14.8	0.3	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|557694884|ref|YP_008797938.1|	-	0.0035	16.6	0.7	0.026	13.7	0.1	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_19	PF13245.1	gi|557694884|ref|YP_008797938.1|	-	0.0048	16.6	0.1	0.011	15.5	0.1	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|557694884|ref|YP_008797938.1|	-	0.0094	15.9	0.5	0.031	14.2	0.1	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_33	PF13671.1	gi|557694884|ref|YP_008797938.1|	-	0.018	14.9	0.0	0.036	13.9	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|557694884|ref|YP_008797938.1|	-	0.022	14.3	0.0	0.042	13.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|557694884|ref|YP_008797938.1|	-	0.031	13.1	0.2	0.05	12.5	0.1	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_10	PF12846.2	gi|557694884|ref|YP_008797938.1|	-	0.033	13.6	0.3	0.31	10.4	0.1	2.0	2	0	0	2	2	2	0	AAA-like	domain
cobW	PF02492.14	gi|557694884|ref|YP_008797938.1|	-	0.037	13.4	0.1	0.058	12.8	0.1	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
SRP54	PF00448.17	gi|557694884|ref|YP_008797938.1|	-	0.039	13.3	0.1	0.062	12.7	0.1	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Mg_chelatase	PF01078.16	gi|557694884|ref|YP_008797938.1|	-	0.055	12.6	0.0	0.075	12.1	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
MMR_HSR1	PF01926.18	gi|557694884|ref|YP_008797938.1|	-	0.056	13.3	0.4	0.092	12.7	0.3	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA	PF00004.24	gi|557694884|ref|YP_008797938.1|	-	0.062	13.5	0.1	0.15	12.2	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|557694884|ref|YP_008797938.1|	-	0.088	12.4	0.1	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
NACHT	PF05729.7	gi|557694884|ref|YP_008797938.1|	-	0.095	12.3	0.3	0.22	11.1	0.1	1.7	2	0	0	2	2	2	0	NACHT	domain
MobB	PF03205.9	gi|557694884|ref|YP_008797938.1|	-	0.11	12.2	0.1	0.24	11.0	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_ATPase	PF09818.4	gi|557694884|ref|YP_008797938.1|	-	0.14	10.6	0.4	0.75	8.3	0.2	1.9	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
ABC_tran	PF00005.22	gi|557694885|ref|YP_008797939.1|	-	1.7e-32	112.5	0.0	3.1e-32	111.7	0.0	1.4	2	0	0	2	2	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557694885|ref|YP_008797939.1|	-	2e-17	64.0	1.3	1.8e-08	34.7	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557694885|ref|YP_008797939.1|	-	5.8e-09	35.5	0.5	5.7e-05	22.4	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|557694885|ref|YP_008797939.1|	-	3.1e-06	27.6	0.2	6.3e-06	26.6	0.1	1.5	2	0	0	2	2	1	1	AAA	domain
AAA_15	PF13175.1	gi|557694885|ref|YP_008797939.1|	-	6e-06	25.5	0.2	0.086	11.8	0.0	2.2	2	1	0	2	2	2	2	AAA	ATPase	domain
AAA_10	PF12846.2	gi|557694885|ref|YP_008797939.1|	-	4.2e-05	23.1	1.2	0.00081	18.9	0.5	2.0	1	1	0	2	2	2	1	AAA-like	domain
AAA_29	PF13555.1	gi|557694885|ref|YP_008797939.1|	-	0.00013	21.4	0.1	0.00033	20.1	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|557694885|ref|YP_008797939.1|	-	0.0019	18.3	0.1	0.0041	17.2	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|557694885|ref|YP_008797939.1|	-	0.0024	17.3	0.1	0.0085	15.5	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|557694885|ref|YP_008797939.1|	-	0.0034	17.2	0.3	0.0095	15.8	0.2	1.7	2	0	0	2	2	2	1	AAA	domain
MutS_V	PF00488.16	gi|557694885|ref|YP_008797939.1|	-	0.0048	16.3	0.0	0.0088	15.4	0.0	1.4	1	0	0	1	1	1	1	MutS	domain	V
Arch_ATPase	PF01637.13	gi|557694885|ref|YP_008797939.1|	-	0.0048	16.6	0.5	0.098	12.3	0.1	2.2	2	0	0	2	2	2	1	Archaeal	ATPase
T2SE	PF00437.15	gi|557694885|ref|YP_008797939.1|	-	0.0055	15.6	0.2	0.013	14.4	0.0	1.6	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
NACHT	PF05729.7	gi|557694885|ref|YP_008797939.1|	-	0.014	15.0	0.4	0.029	14.0	0.1	1.6	2	0	0	2	2	1	0	NACHT	domain
AAA_14	PF13173.1	gi|557694885|ref|YP_008797939.1|	-	0.016	15.1	0.6	0.1	12.4	0.3	2.4	1	1	1	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|557694885|ref|YP_008797939.1|	-	0.018	14.2	0.1	0.034	13.3	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_30	PF13604.1	gi|557694885|ref|YP_008797939.1|	-	0.019	14.5	0.1	0.049	13.2	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|557694885|ref|YP_008797939.1|	-	0.02	14.8	0.1	0.042	13.8	0.1	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
ABC_ATPase	PF09818.4	gi|557694885|ref|YP_008797939.1|	-	0.023	13.3	0.2	0.73	8.3	0.1	2.5	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
FtsK_SpoIIIE	PF01580.13	gi|557694885|ref|YP_008797939.1|	-	0.025	14.0	0.1	0.046	13.1	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Miro	PF08477.8	gi|557694885|ref|YP_008797939.1|	-	0.028	14.9	0.1	0.072	13.5	0.0	1.7	2	0	0	2	2	1	0	Miro-like	protein
cobW	PF02492.14	gi|557694885|ref|YP_008797939.1|	-	0.034	13.6	0.6	0.55	9.6	0.3	2.2	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
SbcCD_C	PF13558.1	gi|557694885|ref|YP_008797939.1|	-	0.039	13.8	0.0	0.51	10.2	0.0	2.3	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_13	PF13166.1	gi|557694885|ref|YP_008797939.1|	-	0.059	11.8	0.0	0.46	8.8	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
Septin	PF00735.13	gi|557694885|ref|YP_008797939.1|	-	0.064	12.2	0.1	0.12	11.3	0.0	1.4	1	0	0	1	1	1	0	Septin
AAA_19	PF13245.1	gi|557694885|ref|YP_008797939.1|	-	0.075	12.7	0.4	1.2	8.9	0.1	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
Dynamin_N	PF00350.18	gi|557694885|ref|YP_008797939.1|	-	0.1	12.4	0.2	0.14	11.9	0.2	1.5	1	1	0	1	1	1	0	Dynamin	family
MobB	PF03205.9	gi|557694885|ref|YP_008797939.1|	-	0.12	12.1	0.2	0.27	10.9	0.2	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CUE	PF02845.11	gi|557694885|ref|YP_008797939.1|	-	0.12	11.8	0.1	0.28	10.7	0.1	1.6	1	0	0	1	1	1	0	CUE	domain
AAA_17	PF13207.1	gi|557694885|ref|YP_008797939.1|	-	0.14	13.0	0.3	0.26	12.1	0.2	1.6	1	1	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|557694885|ref|YP_008797939.1|	-	0.16	11.4	0.4	0.34	10.4	0.3	1.5	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
HAD_2	PF13419.1	gi|557694886|ref|YP_008797940.1|	-	8.3e-18	65.2	0.0	1.1e-17	64.8	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|557694886|ref|YP_008797940.1|	-	4.1e-05	24.1	0.0	0.0041	17.5	0.0	2.2	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|557694886|ref|YP_008797940.1|	-	0.0038	16.8	0.0	0.0066	16.1	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Gp_dh_N	PF00044.19	gi|557694887|ref|YP_008797941.1|	-	3.1e-23	82.3	0.7	2.2e-10	40.7	0.1	2.5	2	0	0	2	2	2	2	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Gp_dh_C	PF02800.15	gi|557694887|ref|YP_008797941.1|	-	9.7e-19	67.3	0.0	1.6e-18	66.6	0.0	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.15	gi|557694887|ref|YP_008797941.1|	-	3.3e-11	43.1	0.7	7.3e-11	42.0	0.3	1.8	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
GFO_IDH_MocA	PF01408.17	gi|557694887|ref|YP_008797941.1|	-	2.7e-06	27.8	0.1	9.4e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_3	PF03447.11	gi|557694887|ref|YP_008797941.1|	-	0.00023	21.5	0.1	0.00075	19.8	0.1	1.9	1	1	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|557694887|ref|YP_008797941.1|	-	0.00052	20.3	0.0	0.0014	18.9	0.0	1.7	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|557694887|ref|YP_008797941.1|	-	0.0065	15.6	2.6	0.053	12.6	0.2	2.8	2	1	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|557694887|ref|YP_008797941.1|	-	0.0086	15.1	0.1	0.013	14.5	0.1	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
PGK	PF00162.14	gi|557694888|ref|YP_008797942.1|	-	1.9e-110	369.0	0.0	2.1e-110	368.8	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
GSDH	PF07995.6	gi|557694889|ref|YP_008797943.1|	-	1.5e-78	264.1	0.0	1.9e-78	263.8	0.0	1.1	1	0	0	1	1	1	1	Glucose	/	Sorbosone	dehydrogenase
Laminin_G_1	PF00054.18	gi|557694889|ref|YP_008797943.1|	-	0.11	12.4	0.0	0.2	11.6	0.0	1.4	1	0	0	1	1	1	0	Laminin	G	domain
NHL	PF01436.16	gi|557694889|ref|YP_008797943.1|	-	0.13	12.2	0.1	0.98	9.4	0.0	2.5	3	0	0	3	3	3	0	NHL	repeat
bZIP_1	PF00170.16	gi|557694890|ref|YP_008797944.1|	-	0.0039	17.1	2.0	0.0064	16.4	1.4	1.3	1	0	0	1	1	1	1	bZIP	transcription	factor
Cep57_CLD_2	PF14197.1	gi|557694890|ref|YP_008797944.1|	-	0.011	15.6	1.5	0.017	15.0	1.0	1.3	1	0	0	1	1	1	0	Centrosome	localisation	domain	of	PPC89
Cast	PF10174.4	gi|557694890|ref|YP_008797944.1|	-	0.014	13.5	0.1	0.014	13.4	0.1	1.0	1	0	0	1	1	1	0	RIM-binding	protein	of	the	cytomatrix	active	zone
Bacillus_HBL	PF05791.6	gi|557694890|ref|YP_008797944.1|	-	0.019	14.3	0.0	0.024	14.0	0.0	1.1	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
vATP-synt_AC39	PF01992.11	gi|557694890|ref|YP_008797944.1|	-	0.023	13.8	0.2	0.025	13.7	0.1	1.0	1	0	0	1	1	1	0	ATP	synthase	(C/AC39)	subunit
NAD_binding_4	PF07993.7	gi|557694890|ref|YP_008797944.1|	-	0.041	12.8	0.0	0.044	12.6	0.0	1.0	1	0	0	1	1	1	0	Male	sterility	protein
DUF641	PF04859.7	gi|557694890|ref|YP_008797944.1|	-	0.051	13.3	0.1	0.064	13.0	0.1	1.1	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF641)
Seryl_tRNA_N	PF02403.17	gi|557694890|ref|YP_008797944.1|	-	0.063	13.2	0.1	0.074	13.0	0.1	1.2	1	0	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
ATG16	PF08614.6	gi|557694890|ref|YP_008797944.1|	-	0.074	12.8	0.4	0.097	12.4	0.3	1.1	1	0	0	1	1	1	0	Autophagy	protein	16	(ATG16)
IncA	PF04156.9	gi|557694890|ref|YP_008797944.1|	-	0.1	12.1	0.4	0.13	11.8	0.3	1.1	1	0	0	1	1	1	0	IncA	protein
HrpB7	PF09486.5	gi|557694890|ref|YP_008797944.1|	-	0.12	12.3	0.0	0.13	12.2	0.0	1.0	1	0	0	1	1	1	0	Bacterial	type	III	secretion	protein	(HrpB7)
Peptidase_M1	PF01433.15	gi|557694892|ref|YP_008797946.1|	-	1.2e-59	202.3	0.1	5.2e-59	200.2	0.1	1.8	1	1	0	1	1	1	1	Peptidase	family	M1
HEAT_2	PF13646.1	gi|557694892|ref|YP_008797946.1|	-	2.5e-27	94.9	3.8	1.6e-11	44.3	0.1	3.8	1	1	1	3	3	3	3	HEAT	repeats
Peptidase_MA_2	PF13485.1	gi|557694892|ref|YP_008797946.1|	-	3.1e-14	53.1	1.4	6.7e-14	52.0	0.9	1.6	1	0	0	1	1	1	1	Peptidase	MA	superfamily
HEAT_PBS	PF03130.11	gi|557694892|ref|YP_008797946.1|	-	1.8e-12	46.4	2.9	0.00046	20.4	0.2	4.6	5	0	0	5	5	5	2	PBS	lyase	HEAT-like	repeat
HEAT	PF02985.17	gi|557694892|ref|YP_008797946.1|	-	3.9e-06	26.4	0.8	1.5	9.0	0.0	4.8	5	0	0	5	5	5	2	HEAT	repeat
DUF445	PF04286.7	gi|557694892|ref|YP_008797946.1|	-	0.0094	15.5	1.6	0.079	12.4	1.1	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF445)
ERAP1_C	PF11838.3	gi|557694892|ref|YP_008797946.1|	-	0.025	13.8	0.0	0.11	11.7	0.0	1.9	2	0	0	2	2	2	0	ERAP1-like	C-terminal	domain
HEAT_EZ	PF13513.1	gi|557694892|ref|YP_008797946.1|	-	0.14	12.6	7.6	1.3	9.5	0.3	4.0	2	1	1	4	4	4	0	HEAT-like	repeat
DUF4200	PF13863.1	gi|557694892|ref|YP_008797946.1|	-	0.16	11.9	5.4	0.34	10.8	3.7	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
CBS	PF00571.23	gi|557694893|ref|YP_008797947.1|	-	9.2e-36	121.3	5.4	3.6e-18	65.0	0.9	2.1	2	0	0	2	2	2	2	CBS	domain
Succ_DH_flav_C	PF02910.15	gi|557694893|ref|YP_008797947.1|	-	0.085	12.7	0.6	0.4	10.5	0.0	1.9	2	0	0	2	2	2	0	Fumarate	reductase	flavoprotein	C-term
PRC	PF05239.11	gi|557694893|ref|YP_008797947.1|	-	0.3	10.9	5.4	5	7.0	0.1	2.7	2	1	0	2	2	2	0	PRC-barrel	domain
Hydrolase_6	PF13344.1	gi|557694894|ref|YP_008797948.1|	-	2.1e-26	91.7	0.0	6e-26	90.2	0.0	1.8	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|557694894|ref|YP_008797948.1|	-	5.5e-17	61.2	0.0	2.5e-16	59.1	0.0	2.1	2	0	0	2	2	2	1	HAD-hyrolase-like
HAD_2	PF13419.1	gi|557694894|ref|YP_008797948.1|	-	4.9e-14	52.9	0.0	9.6e-07	29.1	0.0	2.7	3	0	0	3	3	3	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|557694894|ref|YP_008797948.1|	-	1.3e-12	48.6	0.1	2e-12	47.9	0.0	1.4	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
PGP_phosphatase	PF09419.5	gi|557694894|ref|YP_008797948.1|	-	0.00011	21.5	0.0	0.0013	18.0	0.0	2.2	2	0	0	2	2	2	1	Mitochondrial	PGP	phosphatase
Myotub-related	PF06602.9	gi|557694894|ref|YP_008797948.1|	-	0.074	11.8	0.0	0.13	11.0	0.0	1.3	1	0	0	1	1	1	0	Myotubularin-like	phosphatase	domain
AsnC_trans_reg	PF01037.16	gi|557694895|ref|YP_008797949.1|	-	2.6e-19	68.6	0.0	5.7e-19	67.6	0.0	1.6	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|557694895|ref|YP_008797949.1|	-	1.4e-14	53.1	0.9	1.1e-13	50.3	0.2	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|557694895|ref|YP_008797949.1|	-	3.2e-13	48.9	0.8	9.9e-13	47.4	0.3	1.9	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
TrmB	PF01978.14	gi|557694895|ref|YP_008797949.1|	-	3.9e-07	29.6	0.1	7.2e-07	28.8	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|557694895|ref|YP_008797949.1|	-	1.7e-06	27.5	0.0	3e-06	26.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_43	PF09904.4	gi|557694895|ref|YP_008797949.1|	-	4e-06	26.5	0.1	6.6e-06	25.8	0.1	1.5	1	1	0	1	1	1	1	Winged	helix-turn	helix
MarR_2	PF12802.2	gi|557694895|ref|YP_008797949.1|	-	1.9e-05	24.2	0.0	2.9e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|557694895|ref|YP_008797949.1|	-	6.4e-05	22.6	0.0	0.00013	21.6	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Mga	PF05043.8	gi|557694895|ref|YP_008797949.1|	-	0.00018	21.7	0.1	0.00034	20.8	0.0	1.4	1	0	0	1	1	1	1	Mga	helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|557694895|ref|YP_008797949.1|	-	0.00039	19.9	0.0	0.00063	19.2	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_38	PF13936.1	gi|557694895|ref|YP_008797949.1|	-	0.0004	19.8	0.2	0.001	18.5	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|557694895|ref|YP_008797949.1|	-	0.00082	19.3	0.0	0.0016	18.3	0.0	1.5	2	0	0	2	2	1	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|557694895|ref|YP_008797949.1|	-	0.0009	18.8	0.3	0.0065	16.1	0.0	2.1	2	0	0	2	2	2	1	MarR	family
HTH_11	PF08279.7	gi|557694895|ref|YP_008797949.1|	-	0.0011	18.5	1.6	0.0013	18.3	0.2	1.8	2	0	0	2	2	2	1	HTH	domain
DUF2250	PF10007.4	gi|557694895|ref|YP_008797949.1|	-	0.0015	18.4	0.3	0.0024	17.7	0.2	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.1	gi|557694895|ref|YP_008797949.1|	-	0.0063	16.0	0.3	0.013	15.0	0.1	1.6	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_27	PF13463.1	gi|557694895|ref|YP_008797949.1|	-	0.016	15.5	0.1	0.033	14.5	0.1	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_23	PF13384.1	gi|557694895|ref|YP_008797949.1|	-	0.016	14.8	0.0	0.027	14.1	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
RHH_1	PF01402.16	gi|557694895|ref|YP_008797949.1|	-	0.016	15.0	0.4	0.044	13.7	0.3	1.8	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
Rrf2	PF02082.15	gi|557694895|ref|YP_008797949.1|	-	0.027	14.5	0.3	0.063	13.4	0.1	1.7	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_30	PF13556.1	gi|557694895|ref|YP_008797949.1|	-	0.063	12.8	0.0	0.096	12.2	0.0	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
GntR	PF00392.16	gi|557694895|ref|YP_008797949.1|	-	0.079	12.4	0.1	0.18	11.2	0.1	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
RuvB_C	PF05491.8	gi|557694895|ref|YP_008797949.1|	-	0.081	12.5	0.3	0.34	10.5	0.1	1.9	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
DUF1394	PF07159.7	gi|557694895|ref|YP_008797949.1|	-	0.083	11.9	0.1	0.12	11.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1394)
HTH_9	PF08221.6	gi|557694895|ref|YP_008797949.1|	-	0.11	12.3	0.1	0.26	11.1	0.1	1.6	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
COG2	PF06148.6	gi|557694895|ref|YP_008797949.1|	-	0.23	11.3	1.4	0.39	10.6	0.7	1.6	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
ACP_syn_III_C	PF08541.5	gi|557694896|ref|YP_008797950.1|	-	7.6e-14	51.4	0.0	1.7e-13	50.4	0.0	1.6	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HMG_CoA_synt_C	PF08540.5	gi|557694896|ref|YP_008797950.1|	-	5e-06	26.1	2.4	0.0011	18.5	0.0	2.5	2	1	1	3	3	3	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
ACP_syn_III	PF08545.5	gi|557694896|ref|YP_008797950.1|	-	1.6e-05	24.4	0.7	4.3e-05	23.0	0.5	1.7	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.18	gi|557694896|ref|YP_008797950.1|	-	0.00072	18.6	0.5	0.0011	18.0	0.4	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|557694896|ref|YP_008797950.1|	-	0.0027	17.1	0.1	0.034	13.5	0.0	2.3	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
Ketoacyl-synt_C	PF02801.17	gi|557694896|ref|YP_008797950.1|	-	0.057	13.2	0.1	3.7	7.4	0.1	3.0	3	0	0	3	3	3	0	Beta-ketoacyl	synthase,	C-terminal	domain
Thiolase_C	PF02803.13	gi|557694897|ref|YP_008797951.1|	-	1.9e-07	30.5	1.1	4.7e-06	26.0	0.0	2.6	3	0	0	3	3	3	1	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|557694897|ref|YP_008797951.1|	-	4.9e-05	22.9	7.2	0.00017	21.1	0.2	2.9	3	0	0	3	3	3	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.18	gi|557694897|ref|YP_008797951.1|	-	0.00047	19.2	1.9	0.0021	17.1	0.2	2.3	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
DUF1877	PF08974.5	gi|557694897|ref|YP_008797951.1|	-	0.078	12.6	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1877)
ketoacyl-synt	PF00109.21	gi|557694897|ref|YP_008797951.1|	-	0.086	12.2	4.5	0.11	12.0	2.4	1.7	2	0	0	2	2	2	0	Beta-ketoacyl	synthase,	N-terminal	domain
DUF35	PF01796.12	gi|557694898|ref|YP_008797952.1|	-	1.1e-16	60.7	0.7	1.6e-16	60.2	0.5	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|557694898|ref|YP_008797952.1|	-	4.3e-05	23.2	2.6	8.6e-05	22.3	1.8	1.5	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DZR	PF12773.2	gi|557694898|ref|YP_008797952.1|	-	0.0027	17.4	0.7	0.0047	16.7	0.5	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|557694898|ref|YP_008797952.1|	-	0.041	13.0	1.7	0.068	12.3	1.2	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|557694898|ref|YP_008797952.1|	-	0.082	12.2	0.3	1.8	7.9	0.0	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
NOB1_Zn_bind	PF08772.6	gi|557694898|ref|YP_008797952.1|	-	0.084	12.7	0.4	0.14	12.0	0.3	1.4	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DNA_RNApol_7kD	PF03604.8	gi|557694898|ref|YP_008797952.1|	-	0.31	10.5	6.3	0.95	8.9	4.4	1.9	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_2	PF13240.1	gi|557694898|ref|YP_008797952.1|	-	0.45	10.0	5.3	1.4	8.5	3.5	1.9	1	1	1	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|557694898|ref|YP_008797952.1|	-	2.8	7.7	6.7	5.8	6.6	0.6	2.4	1	1	1	2	2	2	0	Nudix	N-terminal
YhfH	PF14149.1	gi|557694898|ref|YP_008797952.1|	-	2.9	7.7	6.2	8.5	6.2	0.3	2.3	1	1	1	2	2	2	0	YhfH-like	protein
NPV_P10	PF05531.7	gi|557694899|ref|YP_008797953.1|	-	0.011	15.9	0.5	0.089	13.0	0.1	2.4	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
STAT_alpha	PF01017.15	gi|557694899|ref|YP_008797953.1|	-	0.011	15.4	3.3	0.86	9.2	0.2	2.4	2	1	0	2	2	2	0	STAT	protein,	all-alpha	domain
Chalcone	PF02431.10	gi|557694899|ref|YP_008797953.1|	-	0.018	14.4	1.0	0.026	13.8	0.1	1.7	2	0	0	2	2	2	0	Chalcone-flavanone	isomerase
FlgN	PF05130.7	gi|557694899|ref|YP_008797953.1|	-	0.024	14.9	11.0	0.018	15.2	5.2	2.2	2	1	0	2	2	2	0	FlgN	protein
AKNA	PF12443.3	gi|557694899|ref|YP_008797953.1|	-	0.025	14.6	1.2	0.047	13.7	0.1	2.0	2	0	0	2	2	2	0	AT-hook-containing	transcription	factor
Med9	PF07544.8	gi|557694899|ref|YP_008797953.1|	-	0.1	12.3	3.2	0.13	11.9	0.5	2.3	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Flu_NS2	PF00601.14	gi|557694899|ref|YP_008797953.1|	-	0.19	11.9	1.7	3.2	8.0	0.1	2.8	1	1	2	3	3	3	0	Influenza	non-structural	protein	(NS2)
THOC7	PF05615.8	gi|557694899|ref|YP_008797953.1|	-	0.2	11.9	5.9	0.23	11.6	2.8	2.0	1	1	0	1	1	1	0	Tho	complex	subunit	7
Fib_alpha	PF08702.5	gi|557694899|ref|YP_008797953.1|	-	0.2	11.7	1.4	0.3	11.2	0.2	1.8	2	1	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Prominin	PF05478.6	gi|557694899|ref|YP_008797953.1|	-	0.24	8.8	4.6	0.61	7.5	0.1	2.0	1	1	1	2	2	2	0	Prominin
DUF770	PF05591.7	gi|557694899|ref|YP_008797953.1|	-	0.37	10.3	6.5	0.076	12.5	1.8	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF770)
ATP-synt_D	PF01813.12	gi|557694899|ref|YP_008797953.1|	-	0.45	10.0	10.8	1.5	8.3	4.4	3.0	2	1	1	3	3	3	0	ATP	synthase	subunit	D
Spc7	PF08317.6	gi|557694899|ref|YP_008797953.1|	-	0.46	9.0	10.5	0.63	8.6	6.6	1.6	1	1	1	2	2	2	0	Spc7	kinetochore	protein
Cep57_CLD_2	PF14197.1	gi|557694899|ref|YP_008797953.1|	-	0.46	10.4	9.6	3.4	7.6	0.4	3.5	3	0	0	3	3	3	0	Centrosome	localisation	domain	of	PPC89
DUF342	PF03961.8	gi|557694899|ref|YP_008797953.1|	-	0.49	8.7	11.4	0.63	8.3	2.3	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF342)
FlaC_arch	PF05377.6	gi|557694899|ref|YP_008797953.1|	-	0.6	10.0	4.0	0.37	10.7	0.4	2.6	3	0	0	3	3	1	0	Flagella	accessory	protein	C	(FlaC)
Syntaxin	PF00804.20	gi|557694899|ref|YP_008797953.1|	-	0.66	10.1	5.2	0.56	10.3	1.7	2.4	2	1	0	2	2	1	0	Syntaxin
PRP1_N	PF06424.7	gi|557694899|ref|YP_008797953.1|	-	0.91	9.8	4.6	1.8	8.8	0.1	3.0	2	1	1	3	3	3	0	PRP1	splicing	factor,	N-terminal
Ribosomal_L29	PF00831.18	gi|557694899|ref|YP_008797953.1|	-	1.3	8.7	10.0	0.081	12.6	1.2	3.1	2	2	0	3	3	3	0	Ribosomal	L29	protein
DUF3391	PF11871.3	gi|557694899|ref|YP_008797953.1|	-	1.9	8.7	6.3	0.69	10.1	0.4	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3391)
TBPIP	PF07106.8	gi|557694899|ref|YP_008797953.1|	-	2	7.9	12.9	0.26	10.8	2.3	2.7	1	1	4	5	5	5	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Atg14	PF10186.4	gi|557694899|ref|YP_008797953.1|	-	2.2	7.1	7.4	3.3	6.5	5.2	1.3	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Hemerythrin	PF01814.18	gi|557694899|ref|YP_008797953.1|	-	2.5	8.2	5.6	1.6	8.8	1.1	2.2	1	1	1	2	2	2	0	Hemerythrin	HHE	cation	binding	domain
CENP-Q	PF13094.1	gi|557694899|ref|YP_008797953.1|	-	4.3	7.3	12.5	16	5.4	7.5	2.6	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Prefoldin_2	PF01920.15	gi|557694899|ref|YP_008797953.1|	-	8.6	6.1	13.2	2.8	7.7	0.6	3.4	3	1	0	3	3	3	0	Prefoldin	subunit
Cortex-I_coil	PF09304.5	gi|557694899|ref|YP_008797953.1|	-	9.7	6.2	13.8	0.23	11.5	2.4	2.7	2	1	0	2	2	2	0	Cortexillin	I,	coiled	coil
JAB	PF01398.16	gi|557694900|ref|YP_008797954.1|	-	2.2e-23	82.1	0.0	3.1e-23	81.6	0.0	1.2	1	0	0	1	1	1	1	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
Prok-JAB	PF14464.1	gi|557694900|ref|YP_008797954.1|	-	3.3e-11	42.6	0.0	4.8e-11	42.1	0.0	1.2	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
UPF0172	PF03665.8	gi|557694900|ref|YP_008797954.1|	-	4.1e-06	26.4	0.1	6.5e-06	25.7	0.0	1.4	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0172)
ubiquitin	PF00240.18	gi|557694901|ref|YP_008797955.1|	-	1.3e-12	46.9	0.0	1.5e-12	46.6	0.0	1.1	1	0	0	1	1	1	1	Ubiquitin	family
Rad60-SLD	PF11976.3	gi|557694901|ref|YP_008797955.1|	-	5.7e-08	32.3	0.0	6.3e-08	32.2	0.0	1.1	1	0	0	1	1	1	1	Ubiquitin-2	like	Rad60	SUMO-like
YukD	PF08817.5	gi|557694901|ref|YP_008797955.1|	-	2e-05	25.0	0.0	2.7e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	WXG100	protein	secretion	system	(Wss),	protein	YukD
Rad60-SLD_2	PF13881.1	gi|557694901|ref|YP_008797955.1|	-	0.12	12.2	0.0	0.31	10.9	0.0	1.7	1	1	0	1	1	1	0	Ubiquitin-2	like	Rad60	SUMO-like
TUG-UBL1	PF11470.3	gi|557694901|ref|YP_008797955.1|	-	0.15	12.0	0.0	0.17	11.7	0.0	1.1	1	0	0	1	1	1	0	GLUT4	regulating	protein	TUG
UQ_con	PF00179.21	gi|557694902|ref|YP_008797956.1|	-	1.9e-28	98.6	0.0	2.3e-28	98.3	0.0	1.1	1	0	0	1	1	1	1	Ubiquitin-conjugating	enzyme
Prok-E2_B	PF14461.1	gi|557694902|ref|YP_008797956.1|	-	0.002	17.9	0.0	0.0056	16.4	0.0	1.7	1	1	0	1	1	1	1	Prokaryotic	E2	family	B
ThiF	PF00899.16	gi|557694903|ref|YP_008797957.1|	-	6.6e-38	129.6	0.0	1.2e-37	128.7	0.0	1.4	1	0	0	1	1	1	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|557694903|ref|YP_008797957.1|	-	0.00072	19.1	0.0	0.0021	17.6	0.0	1.8	2	0	0	2	2	2	1	MoeZ/MoeB	domain
ubiquitin	PF00240.18	gi|557694903|ref|YP_008797957.1|	-	0.047	13.1	0.0	0.33	10.3	0.0	2.3	2	0	0	2	2	2	0	Ubiquitin	family
2-Hacid_dh_C	PF02826.14	gi|557694903|ref|YP_008797957.1|	-	0.082	12.0	0.0	0.39	9.8	0.0	2.0	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
zf-RING_2	PF13639.1	gi|557694904|ref|YP_008797958.1|	-	4.2e-10	39.2	7.3	5.1e-10	39.0	5.0	1.1	1	0	0	1	1	1	1	Ring	finger	domain
zf-rbx1	PF12678.2	gi|557694904|ref|YP_008797958.1|	-	1.4e-06	28.2	4.9	2.8e-06	27.3	3.4	1.5	1	1	0	1	1	1	1	RING-H2	zinc	finger
zf-C3HC4_3	PF13920.1	gi|557694904|ref|YP_008797958.1|	-	4.5e-06	26.2	6.0	5.7e-06	25.8	4.2	1.2	1	0	0	1	1	1	1	Zinc	finger,	C3HC4	type	(RING	finger)
Prok-RING_1	PF14446.1	gi|557694904|ref|YP_008797958.1|	-	7.8e-06	25.5	5.1	3.7e-05	23.3	1.5	2.0	2	0	0	2	2	2	1	Prokaryotic	RING	finger	family	1
zf-C3HC4_2	PF13923.1	gi|557694904|ref|YP_008797958.1|	-	0.00036	20.4	7.7	0.00048	20.0	5.3	1.2	1	0	0	1	1	1	1	Zinc	finger,	C3HC4	type	(RING	finger)
C1_3	PF07649.7	gi|557694904|ref|YP_008797958.1|	-	0.0004	20.3	4.6	0.0004	20.3	3.2	2.0	2	0	0	2	2	2	1	C1-like	domain
zf-HIT	PF04438.11	gi|557694904|ref|YP_008797958.1|	-	0.006	16.2	3.1	0.006	16.2	2.2	2.3	2	0	0	2	2	2	1	HIT	zinc	finger
PHF5	PF03660.9	gi|557694904|ref|YP_008797958.1|	-	0.007	16.4	0.3	0.007	16.4	0.2	1.4	2	0	0	2	2	1	1	PHF5-like	protein
DUF4206	PF13901.1	gi|557694904|ref|YP_008797958.1|	-	0.0091	15.5	3.3	0.011	15.3	2.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4206)
zf-RING_4	PF14570.1	gi|557694904|ref|YP_008797958.1|	-	0.014	14.9	5.9	0.54	9.8	0.2	2.1	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
PHD	PF00628.24	gi|557694904|ref|YP_008797958.1|	-	0.016	14.8	7.4	0.033	13.8	5.1	1.5	1	1	0	1	1	1	0	PHD-finger
DZR	PF12773.2	gi|557694904|ref|YP_008797958.1|	-	0.018	14.8	6.3	0.043	13.6	1.6	2.1	1	1	1	2	2	2	0	Double	zinc	ribbon
zf-Apc11	PF12861.2	gi|557694904|ref|YP_008797958.1|	-	0.021	14.6	4.7	0.24	11.2	3.3	2.0	1	1	0	1	1	1	0	Anaphase-promoting	complex	subunit	11	RING-H2	finger
zf-RING_5	PF14634.1	gi|557694904|ref|YP_008797958.1|	-	0.077	12.7	7.3	0.22	11.2	4.9	2.0	1	1	0	1	1	1	0	zinc-RING	finger	domain
zf-CCHC	PF00098.18	gi|557694904|ref|YP_008797958.1|	-	0.11	12.4	0.9	0.11	12.4	0.6	2.3	2	0	0	2	2	2	0	Zinc	knuckle
FANCL_C	PF11793.3	gi|557694904|ref|YP_008797958.1|	-	0.13	12.2	7.3	1.5	8.8	5.1	2.1	1	1	0	1	1	1	0	FANCL	C-terminal	domain
zf-RING_3	PF14369.1	gi|557694904|ref|YP_008797958.1|	-	0.15	12.0	6.5	13	5.8	0.0	3.0	2	1	0	2	2	2	0	zinc-finger
Rad50_zn_hook	PF04423.9	gi|557694904|ref|YP_008797958.1|	-	0.15	11.5	0.6	0.15	11.5	0.4	2.5	2	1	1	3	3	3	0	Rad50	zinc	hook	motif
OrfB_Zn_ribbon	PF07282.6	gi|557694904|ref|YP_008797958.1|	-	0.24	11.1	3.2	0.21	11.2	0.4	1.9	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Tnp_zf-ribbon_2	PF13842.1	gi|557694904|ref|YP_008797958.1|	-	0.25	11.7	6.2	1.1	9.7	4.3	1.9	1	1	0	1	1	1	0	DDE_Tnp_1-like	zinc-ribbon
C1_1	PF00130.17	gi|557694904|ref|YP_008797958.1|	-	0.27	10.9	6.6	0.21	11.3	3.2	1.8	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
RINGv	PF12906.2	gi|557694904|ref|YP_008797958.1|	-	0.3	11.1	6.7	0.48	10.5	4.7	1.3	1	0	0	1	1	1	0	RING-variant	domain
C1_2	PF03107.11	gi|557694904|ref|YP_008797958.1|	-	0.38	10.9	6.3	0.1	12.7	1.5	1.9	2	0	0	2	2	2	0	C1	domain
zf-C3HC4	PF00097.20	gi|557694904|ref|YP_008797958.1|	-	0.47	10.1	8.1	5.2	6.8	0.2	2.2	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Peptidase_C74	PF12387.3	gi|557694904|ref|YP_008797958.1|	-	0.47	9.5	2.8	0.56	9.3	1.9	1.2	1	0	0	1	1	1	0	Pestivirus	NS2	peptidase
zinc_ribbon_2	PF13240.1	gi|557694904|ref|YP_008797958.1|	-	0.48	9.9	7.7	1.7	8.2	2.7	2.5	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-Mss51	PF13824.1	gi|557694904|ref|YP_008797958.1|	-	0.61	9.9	7.3	0.21	11.4	2.1	2.2	2	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-C2HC5	PF06221.8	gi|557694904|ref|YP_008797958.1|	-	0.99	9.2	7.6	9.6	6.0	1.5	2.2	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
zf-HC5HC2H	PF13771.1	gi|557694904|ref|YP_008797958.1|	-	1.1	9.4	5.4	0.68	10.1	2.4	1.6	1	1	1	2	2	2	0	PHD-like	zinc-binding	domain
zf-nanos	PF05741.8	gi|557694904|ref|YP_008797958.1|	-	1.5	8.8	6.6	5.5	7.0	2.0	2.7	2	1	0	2	2	2	0	Nanos	RNA	binding	domain
zf-H2C2_2	PF13465.1	gi|557694904|ref|YP_008797958.1|	-	1.5	9.2	9.1	13	6.3	3.0	2.9	2	1	0	2	2	2	0	Zinc-finger	double	domain
zf-ribbon_3	PF13248.1	gi|557694904|ref|YP_008797958.1|	-	1.6	8.0	6.9	0.33	10.2	0.3	2.7	3	0	0	3	3	3	0	zinc-ribbon	domain
DUF983	PF06170.7	gi|557694904|ref|YP_008797958.1|	-	1.8	8.6	5.0	15	5.7	0.0	2.8	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF983)
HypA	PF01155.14	gi|557694904|ref|YP_008797958.1|	-	2.3	7.9	5.0	4.8	6.9	3.5	1.6	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Auto_anti-p27	PF06677.7	gi|557694904|ref|YP_008797958.1|	-	2.8	7.7	11.0	6.7	6.5	0.1	3.0	2	1	1	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
UPF0547	PF10571.4	gi|557694904|ref|YP_008797958.1|	-	2.8	7.7	9.7	1.6	8.4	0.3	2.8	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
zf-Di19	PF05605.7	gi|557694904|ref|YP_008797958.1|	-	3.9	7.6	8.0	3.5	7.8	0.9	2.7	3	0	0	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
DUF2256	PF10013.4	gi|557694904|ref|YP_008797958.1|	-	4.4	7.1	8.1	7.2	6.4	0.2	3.0	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
ADK_lid	PF05191.9	gi|557694904|ref|YP_008797958.1|	-	4.8	6.9	8.6	2.8	7.6	2.9	2.5	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Zn-ribbon_8	PF09723.5	gi|557694904|ref|YP_008797958.1|	-	5.6	7.0	8.1	2	8.4	2.6	2.3	1	1	2	3	3	3	0	Zinc	ribbon	domain
zf-MIZ	PF02891.15	gi|557694904|ref|YP_008797958.1|	-	5.8	6.5	10.6	2.6	7.6	1.0	2.8	2	2	0	2	2	2	0	MIZ/SP-RING	zinc	finger
zf-C4_Topoisom	PF01396.14	gi|557694904|ref|YP_008797958.1|	-	6.9	6.2	9.0	3.1	7.3	0.2	2.7	2	1	1	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-FPG_IleRS	PF06827.9	gi|557694904|ref|YP_008797958.1|	-	7.2	6.3	9.6	6.9	6.4	1.8	2.9	3	1	0	3	3	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-C2H2_4	PF13894.1	gi|557694904|ref|YP_008797958.1|	-	8.7	6.9	8.0	7.5	7.1	0.3	2.9	3	0	0	3	3	3	0	C2H2-type	zinc	finger
Cep57_MT_bd	PF06657.8	gi|557694905|ref|YP_008797959.1|	-	0.00065	19.5	3.4	0.12	12.3	0.7	2.3	1	1	1	2	2	2	2	Centrosome	microtubule-binding	domain	of	Cep57
MCPsignal	PF00015.16	gi|557694905|ref|YP_008797959.1|	-	0.0015	18.1	0.2	0.002	17.6	0.1	1.1	1	0	0	1	1	1	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Baculo_PEP_C	PF04513.7	gi|557694905|ref|YP_008797959.1|	-	0.0024	17.7	0.4	0.0036	17.1	0.3	1.2	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Prefoldin	PF02996.12	gi|557694905|ref|YP_008797959.1|	-	0.0037	16.8	2.7	0.39	10.3	0.1	2.1	1	1	1	2	2	2	2	Prefoldin	subunit
Lebercilin	PF15619.1	gi|557694905|ref|YP_008797959.1|	-	0.0039	16.6	0.7	0.0041	16.5	0.5	1.2	1	0	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
DUF342	PF03961.8	gi|557694905|ref|YP_008797959.1|	-	0.0091	14.4	0.7	0.0096	14.3	0.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
Cauli_AT	PF03233.8	gi|557694905|ref|YP_008797959.1|	-	0.0094	15.6	0.3	0.01	15.5	0.2	1.2	1	0	0	1	1	1	1	Aphid	transmission	protein
Tropomyosin_1	PF12718.2	gi|557694905|ref|YP_008797959.1|	-	0.011	15.5	3.5	0.011	15.5	2.4	1.1	1	0	0	1	1	1	0	Tropomyosin	like
NPV_P10	PF05531.7	gi|557694905|ref|YP_008797959.1|	-	0.014	15.6	1.5	0.043	14.0	1.0	1.8	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
AAA_27	PF13514.1	gi|557694905|ref|YP_008797959.1|	-	0.016	12.9	0.9	0.02	12.6	0.6	1.0	1	0	0	1	1	1	0	AAA	domain
CesA	PF11439.3	gi|557694905|ref|YP_008797959.1|	-	0.017	15.0	0.6	0.09	12.7	0.4	2.0	1	1	0	1	1	1	0	Type	III	secretion	system	filament	chaperone	CesA
Vps5	PF09325.5	gi|557694905|ref|YP_008797959.1|	-	0.022	14.0	0.6	0.029	13.6	0.4	1.2	1	0	0	1	1	1	0	Vps5	C	terminal	like
FlxA	PF14282.1	gi|557694905|ref|YP_008797959.1|	-	0.033	14.1	0.7	0.042	13.8	0.5	1.3	1	0	0	1	1	1	0	FlxA-like	protein
Enkurin	PF13864.1	gi|557694905|ref|YP_008797959.1|	-	0.038	14.2	1.1	0.052	13.7	0.3	1.6	2	0	0	2	2	1	0	Calmodulin-binding
SlyX	PF04102.7	gi|557694905|ref|YP_008797959.1|	-	0.038	14.3	5.3	0.63	10.4	0.5	2.2	1	1	1	2	2	2	0	SlyX
DUF972	PF06156.8	gi|557694905|ref|YP_008797959.1|	-	0.044	14.1	2.2	1	9.7	0.7	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Hemerythrin	PF01814.18	gi|557694905|ref|YP_008797959.1|	-	0.058	13.5	0.8	0.43	10.7	0.3	1.9	1	1	1	2	2	2	0	Hemerythrin	HHE	cation	binding	domain
GAT	PF03127.9	gi|557694905|ref|YP_008797959.1|	-	0.066	13.1	1.4	0.099	12.6	0.9	1.3	1	0	0	1	1	1	0	GAT	domain
DUF948	PF06103.6	gi|557694905|ref|YP_008797959.1|	-	0.073	12.9	1.0	0.42	10.5	0.7	2.0	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF1664	PF07889.7	gi|557694905|ref|YP_008797959.1|	-	0.082	12.7	1.8	0.19	11.5	1.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
RmuC	PF02646.11	gi|557694905|ref|YP_008797959.1|	-	0.097	11.4	2.3	0.14	10.9	1.6	1.3	1	1	0	1	1	1	0	RmuC	family
DASH_Duo1	PF08651.5	gi|557694905|ref|YP_008797959.1|	-	0.097	12.2	0.7	0.31	10.6	0.2	1.9	1	1	1	2	2	2	0	DASH	complex	subunit	Duo1
PilJ	PF13675.1	gi|557694905|ref|YP_008797959.1|	-	0.11	12.8	0.1	0.13	12.5	0.1	1.2	1	0	0	1	1	1	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
DUF4061	PF13270.1	gi|557694905|ref|YP_008797959.1|	-	0.13	12.4	1.3	0.35	10.9	0.5	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4061)
DUF310	PF03750.8	gi|557694905|ref|YP_008797959.1|	-	0.13	12.4	0.1	0.38	10.9	0.0	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF310)
Spc7	PF08317.6	gi|557694905|ref|YP_008797959.1|	-	0.14	10.8	2.7	0.16	10.5	1.9	1.0	1	0	0	1	1	1	0	Spc7	kinetochore	protein
Syntaxin	PF00804.20	gi|557694905|ref|YP_008797959.1|	-	0.14	12.3	1.9	0.4	10.8	1.3	1.7	1	1	0	1	1	1	0	Syntaxin
APG6	PF04111.7	gi|557694905|ref|YP_008797959.1|	-	0.14	11.1	1.9	0.18	10.8	1.3	1.1	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Vps51	PF08700.6	gi|557694905|ref|YP_008797959.1|	-	0.15	11.9	1.9	8.4	6.3	1.3	2.2	1	1	0	1	1	1	0	Vps51/Vps67
DUF3461	PF11944.3	gi|557694905|ref|YP_008797959.1|	-	0.15	11.9	1.1	0.22	11.3	0.7	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3461)
Syntaxin-6_N	PF09177.6	gi|557694905|ref|YP_008797959.1|	-	0.17	12.3	1.8	0.32	11.4	1.2	1.6	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
DUF3782	PF12644.2	gi|557694905|ref|YP_008797959.1|	-	0.19	11.5	1.4	0.4	10.5	1.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
BLOC1_2	PF10046.4	gi|557694905|ref|YP_008797959.1|	-	0.29	11.2	2.5	0.57	10.3	1.8	1.4	1	1	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
CorA	PF01544.13	gi|557694905|ref|YP_008797959.1|	-	0.35	9.8	4.2	1.5	7.7	0.4	1.9	1	1	2	3	3	3	0	CorA-like	Mg2+	transporter	protein
PspB	PF06667.7	gi|557694905|ref|YP_008797959.1|	-	0.36	10.8	1.6	1.4	8.9	0.2	2.1	1	1	1	2	2	2	0	Phage	shock	protein	B
TMF_TATA_bd	PF12325.3	gi|557694905|ref|YP_008797959.1|	-	2.2	8.0	7.6	0.37	10.5	2.1	1.9	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
IncA	PF04156.9	gi|557694906|ref|YP_008797960.1|	-	0.0001	21.9	51.3	0.029	13.9	18.1	2.5	1	1	1	2	2	2	2	IncA	protein
DUF4201	PF13870.1	gi|557694906|ref|YP_008797960.1|	-	0.00014	21.4	13.7	0.00014	21.4	9.5	3.4	1	1	2	3	3	3	1	Domain	of	unknown	function	(DUF4201)
Reo_sigmaC	PF04582.7	gi|557694906|ref|YP_008797960.1|	-	0.00033	19.9	15.7	0.07	12.2	2.8	3.2	2	1	1	3	3	3	3	Reovirus	sigma	C	capsid	protein
Baculo_PEP_C	PF04513.7	gi|557694906|ref|YP_008797960.1|	-	0.0011	18.7	16.1	12	5.7	7.2	3.7	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
AAA_13	PF13166.1	gi|557694906|ref|YP_008797960.1|	-	0.0016	17.0	19.3	0.0016	17.0	13.4	2.0	1	1	1	2	2	2	2	AAA	domain
DUF948	PF06103.6	gi|557694906|ref|YP_008797960.1|	-	0.0017	18.1	15.5	0.018	14.8	0.5	4.2	2	1	2	4	4	4	1	Bacterial	protein	of	unknown	function	(DUF948)
EzrA	PF06160.7	gi|557694906|ref|YP_008797960.1|	-	0.002	16.3	24.6	0.002	16.3	17.0	2.6	1	1	2	3	3	3	1	Septation	ring	formation	regulator,	EzrA
COG2	PF06148.6	gi|557694906|ref|YP_008797960.1|	-	0.0027	17.5	9.8	0.0027	17.5	6.8	4.2	1	1	2	3	3	3	1	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF1664	PF07889.7	gi|557694906|ref|YP_008797960.1|	-	0.0028	17.4	26.2	0.15	11.8	3.9	3.8	1	1	3	4	4	4	2	Protein	of	unknown	function	(DUF1664)
Atg14	PF10186.4	gi|557694906|ref|YP_008797960.1|	-	0.0034	16.3	7.9	0.0034	16.3	5.5	3.0	1	1	2	3	3	3	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF3450	PF11932.3	gi|557694906|ref|YP_008797960.1|	-	0.0035	16.6	28.7	0.094	11.9	2.8	3.4	1	1	1	3	3	3	2	Protein	of	unknown	function	(DUF3450)
GAS	PF13851.1	gi|557694906|ref|YP_008797960.1|	-	0.0039	16.4	45.4	0.27	10.4	6.0	3.1	1	1	1	3	3	3	3	Growth-arrest	specific	micro-tubule	binding
Seryl_tRNA_N	PF02403.17	gi|557694906|ref|YP_008797960.1|	-	0.0088	16.0	40.1	0.028	14.4	6.1	4.1	1	1	0	3	3	3	1	Seryl-tRNA	synthetase	N-terminal	domain
TMF_TATA_bd	PF12325.3	gi|557694906|ref|YP_008797960.1|	-	0.01	15.5	51.0	0.057	13.1	3.7	4.2	1	1	3	4	4	4	0	TATA	element	modulatory	factor	1	TATA	binding
CCDC155	PF14662.1	gi|557694906|ref|YP_008797960.1|	-	0.011	15.3	47.4	0.0063	16.1	21.0	3.0	1	1	1	2	2	2	0	Coiled-coil	region	of	CCDC155
Spc7	PF08317.6	gi|557694906|ref|YP_008797960.1|	-	0.029	13.0	43.9	0.11	11.1	13.6	3.1	1	1	2	3	3	3	0	Spc7	kinetochore	protein
PRANC	PF09372.5	gi|557694906|ref|YP_008797960.1|	-	0.054	13.4	2.2	1.2	9.1	0.1	3.3	3	0	0	3	3	3	0	PRANC	domain
Mod_r	PF07200.8	gi|557694906|ref|YP_008797960.1|	-	0.058	13.3	37.2	0.13	12.1	6.0	3.6	1	1	2	3	3	3	0	Modifier	of	rudimentary	(Mod(r))	protein
Sigma70_r4_2	PF08281.7	gi|557694906|ref|YP_008797960.1|	-	0.099	12.1	8.8	2.5	7.6	0.2	3.7	3	0	0	3	3	3	0	Sigma-70,	region	4
NPV_P10	PF05531.7	gi|557694906|ref|YP_008797960.1|	-	0.11	12.7	11.7	0.08	13.2	0.9	4.2	2	1	2	4	4	4	0	Nucleopolyhedrovirus	P10	protein
STAT_alpha	PF01017.15	gi|557694906|ref|YP_008797960.1|	-	0.12	12.0	28.9	0.14	11.8	7.1	3.9	1	1	1	3	3	3	0	STAT	protein,	all-alpha	domain
MHC_II_beta	PF00969.14	gi|557694906|ref|YP_008797960.1|	-	0.22	11.5	1.1	1.2	9.1	0.0	2.7	2	2	1	3	3	2	0	Class	II	histocompatibility	antigen,	beta	domain
Laminin_II	PF06009.7	gi|557694906|ref|YP_008797960.1|	-	0.23	11.2	28.2	0.22	11.2	3.8	3.6	1	1	3	4	4	4	0	Laminin	Domain	II
HrpB7	PF09486.5	gi|557694906|ref|YP_008797960.1|	-	0.28	11.1	27.9	0.3	10.9	2.2	4.4	1	1	3	4	4	4	0	Bacterial	type	III	secretion	protein	(HrpB7)
Prefoldin	PF02996.12	gi|557694906|ref|YP_008797960.1|	-	0.34	10.5	35.0	0.084	12.5	0.5	5.7	3	2	3	6	6	6	0	Prefoldin	subunit
COG5	PF10392.4	gi|557694906|ref|YP_008797960.1|	-	0.34	10.8	25.2	0.23	11.4	1.3	3.8	1	1	1	3	3	3	0	Golgi	transport	complex	subunit	5
FliJ	PF02050.11	gi|557694906|ref|YP_008797960.1|	-	0.37	10.8	41.6	0.23	11.5	0.9	3.4	1	1	2	3	3	3	0	Flagellar	FliJ	protein
TPR_MLP1_2	PF07926.7	gi|557694906|ref|YP_008797960.1|	-	0.41	10.3	46.9	0.83	9.4	7.0	4.0	1	1	3	4	4	4	0	TPR/MLP1/MLP2-like	protein
DUF2680	PF10925.3	gi|557694906|ref|YP_008797960.1|	-	0.49	10.3	5.3	7.2	6.5	0.1	3.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2680)
Tektin	PF03148.9	gi|557694906|ref|YP_008797960.1|	-	0.68	8.4	41.1	0.046	12.2	0.6	3.9	1	1	1	3	3	3	0	Tektin	family
Cast	PF10174.4	gi|557694906|ref|YP_008797960.1|	-	0.78	7.7	50.1	48	1.7	34.7	2.1	1	1	0	1	1	1	0	RIM-binding	protein	of	the	cytomatrix	active	zone
DUF972	PF06156.8	gi|557694906|ref|YP_008797960.1|	-	0.79	10.0	38.0	9.1	6.6	4.5	4.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF972)
AAA_27	PF13514.1	gi|557694906|ref|YP_008797960.1|	-	1.2	6.7	39.1	0.25	8.9	13.9	2.2	1	1	0	1	1	1	0	AAA	domain
DUF2937	PF11157.3	gi|557694906|ref|YP_008797960.1|	-	1.2	8.4	12.6	0.71	9.1	0.4	3.8	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF2937)
CALCOCO1	PF07888.6	gi|557694906|ref|YP_008797960.1|	-	1.7	6.8	41.2	2.8	6.1	8.5	2.8	1	1	1	2	2	2	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
TMF_DNA_bd	PF12329.3	gi|557694906|ref|YP_008797960.1|	-	3.3	7.5	55.3	0.18	11.5	2.0	5.0	3	2	1	4	4	4	0	TATA	element	modulatory	factor	1	DNA	binding
Cauli_AT	PF03233.8	gi|557694906|ref|YP_008797960.1|	-	3.4	7.3	21.0	0.61	9.7	2.8	3.3	1	1	2	3	3	3	0	Aphid	transmission	protein
ATG16	PF08614.6	gi|557694906|ref|YP_008797960.1|	-	3.4	7.4	41.8	2.2	8.0	1.4	3.4	1	1	2	3	3	3	0	Autophagy	protein	16	(ATG16)
DUF4248	PF14053.1	gi|557694906|ref|YP_008797960.1|	-	3.7	7.1	7.0	1.5	8.4	0.4	3.3	3	1	1	4	4	3	0	Domain	of	unknown	function	(DUF4248)
DUF3584	PF12128.3	gi|557694906|ref|YP_008797960.1|	-	4.8	4.3	37.3	8	3.6	21.7	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
ADIP	PF11559.3	gi|557694906|ref|YP_008797960.1|	-	5.3	6.9	41.7	0.71	9.7	1.0	3.8	1	1	2	3	3	3	0	Afadin-	and	alpha	-actinin-Binding
CENP-F_leu_zip	PF10473.4	gi|557694906|ref|YP_008797960.1|	-	6.5	6.6	57.6	5.1	6.9	13.1	3.2	1	1	2	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF4200	PF13863.1	gi|557694906|ref|YP_008797960.1|	-	6.8	6.6	52.8	2.9	7.8	11.4	4.0	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF4200)
Flu_NS2	PF00601.14	gi|557694906|ref|YP_008797960.1|	-	7.8	6.7	21.1	0.8	9.9	4.5	4.0	1	1	1	3	3	3	0	Influenza	non-structural	protein	(NS2)
V_ATPase_I	PF01496.14	gi|557694906|ref|YP_008797960.1|	-	8.5	4.0	36.9	1.5	6.6	7.9	3.1	1	1	1	2	2	1	0	V-type	ATPase	116kDa	subunit	family
DUF342	PF03961.8	gi|557694906|ref|YP_008797960.1|	-	9.3	4.5	37.2	2.1	6.6	2.8	3.1	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF342)
zf-RING_2	PF13639.1	gi|557694907|ref|YP_008797961.1|	-	2.5e-11	43.2	5.4	3.6e-11	42.6	3.7	1.2	1	0	0	1	1	1	1	Ring	finger	domain
zf-C3HC4_2	PF13923.1	gi|557694907|ref|YP_008797961.1|	-	0.00016	21.6	7.1	0.00027	20.9	4.9	1.4	1	0	0	1	1	1	1	Zinc	finger,	C3HC4	type	(RING	finger)
UPF0547	PF10571.4	gi|557694907|ref|YP_008797961.1|	-	0.00027	20.5	10.2	0.0013	18.3	2.5	2.3	2	0	0	2	2	2	1	Uncharacterised	protein	family	UPF0547
PHD	PF00628.24	gi|557694907|ref|YP_008797961.1|	-	0.00028	20.5	4.7	0.00043	19.9	3.2	1.3	1	0	0	1	1	1	1	PHD-finger
Prok-RING_1	PF14446.1	gi|557694907|ref|YP_008797961.1|	-	0.00071	19.2	8.1	0.003	17.2	5.6	1.9	1	1	0	1	1	1	1	Prokaryotic	RING	finger	family	1
zf-rbx1	PF12678.2	gi|557694907|ref|YP_008797961.1|	-	0.00088	19.3	0.8	0.0016	18.5	0.6	1.4	1	0	0	1	1	1	1	RING-H2	zinc	finger
zf-ribbon_3	PF13248.1	gi|557694907|ref|YP_008797961.1|	-	0.0016	17.6	8.6	0.14	11.3	1.2	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|557694907|ref|YP_008797961.1|	-	0.0028	17.0	4.7	0.16	11.5	0.2	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-C3HC4_3	PF13920.1	gi|557694907|ref|YP_008797961.1|	-	0.0031	17.1	5.8	0.0031	17.1	3.3	1.6	2	0	0	2	2	2	1	Zinc	finger,	C3HC4	type	(RING	finger)
zf-RING_5	PF14634.1	gi|557694907|ref|YP_008797961.1|	-	0.0033	17.1	5.7	0.0049	16.5	3.9	1.3	1	0	0	1	1	1	1	zinc-RING	finger	domain
C1_1	PF00130.17	gi|557694907|ref|YP_008797961.1|	-	0.0039	16.9	1.6	0.0039	16.9	1.1	1.5	1	1	0	1	1	1	1	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF4206	PF13901.1	gi|557694907|ref|YP_008797961.1|	-	0.0043	16.6	2.6	0.0064	16.0	1.8	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4206)
zf-RING-like	PF08746.6	gi|557694907|ref|YP_008797961.1|	-	0.0061	16.5	6.7	0.013	15.5	4.7	1.5	1	1	0	1	1	1	1	RING-like	domain
zf-C3HC4	PF00097.20	gi|557694907|ref|YP_008797961.1|	-	0.008	15.8	5.8	0.012	15.3	4.0	1.2	1	0	0	1	1	1	1	Zinc	finger,	C3HC4	type	(RING	finger)
zf-RING_4	PF14570.1	gi|557694907|ref|YP_008797961.1|	-	0.078	12.5	5.0	0.21	11.2	3.5	1.6	1	1	0	1	1	1	0	RING/Ubox	like	zinc-binding	domain
DZR	PF12773.2	gi|557694907|ref|YP_008797961.1|	-	0.1	12.4	7.2	1.5	8.7	5.0	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-MIZ	PF02891.15	gi|557694907|ref|YP_008797961.1|	-	0.28	10.7	2.5	0.49	9.9	1.8	1.4	1	0	0	1	1	1	0	MIZ/SP-RING	zinc	finger
FANCL_C	PF11793.3	gi|557694907|ref|YP_008797961.1|	-	0.4	10.6	7.6	13	5.8	5.2	2.3	1	1	0	1	1	1	0	FANCL	C-terminal	domain
zinc-ribbons_6	PF07191.7	gi|557694907|ref|YP_008797961.1|	-	0.9	9.3	4.5	3.7	7.4	3.1	1.8	1	1	0	1	1	1	0	zinc-ribbons
zf-AN1	PF01428.11	gi|557694907|ref|YP_008797961.1|	-	0.94	9.4	3.9	2.5	8.0	0.3	2.1	1	1	1	2	2	2	0	AN1-like	Zinc	finger
zf-Mss51	PF13824.1	gi|557694907|ref|YP_008797961.1|	-	1.2	9.0	7.5	0.36	10.7	1.4	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DUF35_N	PF12172.3	gi|557694907|ref|YP_008797961.1|	-	1.9	8.4	4.9	7.5	6.5	0.3	2.6	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
TF_Zn_Ribbon	PF08271.7	gi|557694907|ref|YP_008797961.1|	-	2.5	7.5	11.4	9.5	5.6	3.5	2.7	2	1	0	2	2	2	0	TFIIB	zinc-binding
DNA_RNApol_7kD	PF03604.8	gi|557694907|ref|YP_008797961.1|	-	6.3	6.3	6.2	2.6	7.6	1.0	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
SpoIIIAC	PF06686.6	gi|557694907|ref|YP_008797961.1|	-	6.5	6.6	8.7	5.7	6.8	0.3	3.0	3	0	0	3	3	3	0	Stage	III	sporulation	protein	AC/AD	protein	family
tRNA-synt_2b	PF00587.20	gi|557694908|ref|YP_008797962.1|	-	5e-45	153.1	0.0	8.3e-45	152.4	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|557694908|ref|YP_008797962.1|	-	6.1e-22	77.3	0.1	1.1e-21	76.6	0.1	1.4	1	0	0	1	1	1	1	Anticodon	binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|557694908|ref|YP_008797962.1|	-	0.073	12.8	0.1	1.7	8.5	0.0	2.6	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|557694908|ref|YP_008797962.1|	-	0.09	12.7	0.1	9.9	6.2	0.0	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zinc_ribbon_4	PF13717.1	gi|557694908|ref|YP_008797962.1|	-	0.096	12.3	4.2	0.28	10.9	0.1	3.2	4	0	0	4	4	4	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|557694908|ref|YP_008797962.1|	-	0.098	12.2	4.4	0.22	11.1	0.1	3.1	4	0	0	4	4	4	0	zinc-ribbon	domain
Oxidored_q4	PF00507.14	gi|557694909|ref|YP_008797963.1|	-	2.5e-09	36.8	0.5	3.4e-09	36.4	0.4	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
ABC2_membrane_3	PF12698.2	gi|557694909|ref|YP_008797963.1|	-	0.00034	19.7	2.4	0.00039	19.5	1.7	1.0	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|557694909|ref|YP_008797963.1|	-	0.11	11.6	6.8	0.15	11.1	4.7	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF3325	PF11804.3	gi|557694909|ref|YP_008797963.1|	-	0.13	12.1	5.0	0.085	12.8	2.2	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3325)
IncA	PF04156.9	gi|557694909|ref|YP_008797963.1|	-	2.9	7.4	11.3	1.4	8.4	0.2	2.0	2	0	0	2	2	2	0	IncA	protein
NADHdh	PF00146.16	gi|557694910|ref|YP_008797964.1|	-	3e-71	240.0	19.0	3.9e-71	239.6	13.2	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
Fer4	PF00037.22	gi|557694912|ref|YP_008797966.1|	-	1.4e-10	40.2	10.6	1.5e-07	30.7	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|557694912|ref|YP_008797966.1|	-	2e-09	37.6	1.5	9.9e-05	22.6	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|557694912|ref|YP_008797966.1|	-	1.7e-07	31.1	0.7	0.007	16.3	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|557694912|ref|YP_008797966.1|	-	1.7e-07	30.9	1.8	0.0033	17.2	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|557694912|ref|YP_008797966.1|	-	1.8e-07	31.2	0.6	0.0074	16.5	0.0	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|557694912|ref|YP_008797966.1|	-	2e-07	30.7	2.5	0.0044	16.8	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|557694912|ref|YP_008797966.1|	-	7.1e-07	28.7	10.9	0.00026	20.7	1.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|557694912|ref|YP_008797966.1|	-	1.5e-06	28.5	0.1	0.0087	16.4	0.0	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|557694912|ref|YP_008797966.1|	-	2.4e-06	27.7	1.1	0.031	14.6	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|557694912|ref|YP_008797966.1|	-	1.7e-05	25.4	2.0	0.013	16.2	0.3	2.6	2	1	1	3	3	3	3	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.2	gi|557694912|ref|YP_008797966.1|	-	7.1e-05	22.4	2.7	7.1e-05	22.4	1.8	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|557694912|ref|YP_008797966.1|	-	0.0075	16.5	12.2	0.023	14.9	1.5	2.2	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|557694912|ref|YP_008797966.1|	-	0.076	13.5	8.6	0.54	10.8	0.7	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|557694912|ref|YP_008797966.1|	-	0.34	11.5	15.4	0.11	13.0	2.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|557694912|ref|YP_008797966.1|	-	1.8	8.9	10.0	3.5	8.0	0.4	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
COX1	PF00115.15	gi|557694913|ref|YP_008797967.1|	-	2.2e-156	520.9	63.6	2.6e-156	520.7	44.1	1.0	1	0	0	1	1	1	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
COX2	PF00116.15	gi|557694914|ref|YP_008797968.1|	-	3.6e-22	78.4	0.0	2.4e-20	72.5	0.0	2.1	1	1	1	2	2	2	2	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Cupredoxin_1	PF13473.1	gi|557694914|ref|YP_008797968.1|	-	8.9e-10	38.3	0.0	1.4e-09	37.7	0.0	1.4	1	1	0	1	1	1	1	Cupredoxin-like	domain
Yip1	PF04893.12	gi|557694915|ref|YP_008797969.1|	-	0.017	14.6	1.6	0.018	14.5	1.1	1.0	1	0	0	1	1	1	0	Yip1	domain
ABC2_membrane_5	PF13346.1	gi|557694915|ref|YP_008797969.1|	-	0.02	14.1	3.6	0.025	13.8	2.5	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF3733	PF12534.3	gi|557694915|ref|YP_008797969.1|	-	0.055	12.7	0.0	0.08	12.2	0.0	1.4	1	0	0	1	1	1	0	Leucine-rich	repeat	containing	protein	8
Virul_fac_BrkB	PF03631.10	gi|557694915|ref|YP_008797969.1|	-	0.058	12.7	2.3	0.07	12.4	1.6	1.0	1	0	0	1	1	1	0	Virulence	factor	BrkB
NADH-u_ox-rdase	PF10785.4	gi|557694915|ref|YP_008797969.1|	-	0.14	12.3	0.3	2.8	8.2	0.2	2.0	1	1	0	1	1	1	0	NADH-ubiquinone	oxidoreductase	complex	I,	21	kDa	subunit
DUF2207	PF09972.4	gi|557694915|ref|YP_008797969.1|	-	0.38	9.2	1.9	0.37	9.3	1.4	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
zf-DHHC	PF01529.15	gi|557694915|ref|YP_008797969.1|	-	0.38	10.1	2.2	0.46	9.8	1.5	1.1	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
Gram_pos_anchor	PF00746.16	gi|557694915|ref|YP_008797969.1|	-	5.2	6.9	5.1	9.1	6.2	0.2	2.1	2	0	0	2	2	2	0	Gram	positive	anchor
COX15-CtaA	PF02628.10	gi|557694916|ref|YP_008797970.1|	-	2e-12	46.5	18.8	9.7e-07	27.9	7.8	2.0	1	1	1	2	2	2	2	Cytochrome	oxidase	assembly	protein
PepSY_TM_3	PF13706.1	gi|557694916|ref|YP_008797970.1|	-	2	7.9	5.4	1.9	7.9	0.2	2.6	2	0	0	2	2	2	0	PepSY-associated	TM	helix
Bac_luciferase	PF00296.15	gi|557694917|ref|YP_008797971.1|	-	8.9e-57	192.5	0.0	1.4e-55	188.6	0.0	1.9	1	1	1	2	2	2	2	Luciferase-like	monooxygenase
Phos_pyr_kin	PF08543.7	gi|557694918|ref|YP_008797972.1|	-	2.2e-98	328.3	2.8	3e-98	327.9	1.9	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Aldolase_2	PF10120.4	gi|557694918|ref|YP_008797972.1|	-	3.2e-60	202.3	0.0	8.5e-60	200.9	0.0	1.7	2	0	0	2	2	2	1	Putative	aldolase
PfkB	PF00294.19	gi|557694918|ref|YP_008797972.1|	-	1.7e-14	53.6	0.5	2.7e-14	52.9	0.3	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|557694918|ref|YP_008797972.1|	-	0.00019	20.7	4.1	0.0003	20.1	2.8	1.3	1	0	0	1	1	1	1	Carbohydrate	kinase
UDPG_MGDP_dh_C	PF03720.10	gi|557694918|ref|YP_008797972.1|	-	0.11	12.6	0.0	0.72	10.0	0.0	2.3	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NTP_transf_4	PF13562.1	gi|557694919|ref|YP_008797973.1|	-	2e-24	85.9	0.0	3.2e-24	85.3	0.0	1.3	1	0	0	1	1	1	1	Sugar	nucleotidyl	transferase
Hexapep	PF00132.19	gi|557694919|ref|YP_008797973.1|	-	8.4e-08	31.3	5.0	0.019	14.4	0.0	3.8	3	0	0	3	3	3	3	Bacterial	transferase	hexapeptide	(six	repeats)
PEP-utilisers_N	PF05524.8	gi|557694919|ref|YP_008797973.1|	-	0.049	13.4	0.0	0.082	12.6	0.0	1.3	1	0	0	1	1	1	0	PEP-utilising	enzyme,	N-terminal
AAA_16	PF13191.1	gi|557694920|ref|YP_008797974.1|	-	0.00037	20.5	0.1	0.00076	19.5	0.0	1.5	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|557694920|ref|YP_008797974.1|	-	0.00091	18.9	0.3	0.0062	16.2	0.0	2.1	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|557694920|ref|YP_008797974.1|	-	0.00092	19.3	0.1	0.0067	16.5	0.0	2.0	1	1	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|557694920|ref|YP_008797974.1|	-	0.0012	18.5	0.2	0.003	17.2	0.1	1.6	2	0	0	2	2	2	1	NACHT	domain
DUF87	PF01935.12	gi|557694920|ref|YP_008797974.1|	-	0.0025	17.6	0.0	0.0048	16.7	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
Arch_ATPase	PF01637.13	gi|557694920|ref|YP_008797974.1|	-	0.0025	17.5	0.0	0.0075	15.9	0.0	1.8	1	1	1	2	2	2	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|557694920|ref|YP_008797974.1|	-	0.0028	17.1	0.1	0.0048	16.3	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|557694920|ref|YP_008797974.1|	-	0.0043	16.4	0.2	0.0098	15.3	0.1	1.4	1	1	0	1	1	1	1	AAA	domain
UvrD-helicase	PF00580.16	gi|557694920|ref|YP_008797974.1|	-	0.0044	16.3	0.1	0.0077	15.5	0.0	1.4	1	0	0	1	1	1	1	UvrD/REP	helicase	N-terminal	domain
Miro	PF08477.8	gi|557694920|ref|YP_008797974.1|	-	0.0054	17.2	0.1	0.013	16.0	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
ABC_tran	PF00005.22	gi|557694920|ref|YP_008797974.1|	-	0.008	16.4	0.4	0.0092	16.2	0.3	1.5	1	1	0	1	1	1	1	ABC	transporter
AAA_10	PF12846.2	gi|557694920|ref|YP_008797974.1|	-	0.0087	15.5	0.0	0.0098	15.3	0.0	1.2	1	0	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|557694920|ref|YP_008797974.1|	-	0.02	14.3	0.0	0.037	13.4	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
ATP-synt_ab	PF00006.20	gi|557694920|ref|YP_008797974.1|	-	0.024	14.1	0.1	0.039	13.4	0.1	1.6	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
MobB	PF03205.9	gi|557694920|ref|YP_008797974.1|	-	0.034	13.8	0.1	0.064	12.9	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PduV-EutP	PF10662.4	gi|557694920|ref|YP_008797974.1|	-	0.038	13.4	0.0	0.058	12.8	0.0	1.4	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
cobW	PF02492.14	gi|557694920|ref|YP_008797974.1|	-	0.039	13.4	0.2	0.063	12.7	0.1	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA	PF00004.24	gi|557694920|ref|YP_008797974.1|	-	0.046	13.9	0.0	0.11	12.7	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|557694920|ref|YP_008797974.1|	-	0.05	13.5	0.0	0.072	12.9	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|557694920|ref|YP_008797974.1|	-	0.063	12.4	0.0	0.11	11.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Pox_A32	PF04665.7	gi|557694920|ref|YP_008797974.1|	-	0.069	12.4	0.2	0.12	11.6	0.1	1.3	1	0	0	1	1	1	0	Poxvirus	A32	protein
AAA_24	PF13479.1	gi|557694920|ref|YP_008797974.1|	-	0.069	12.7	0.1	0.12	11.9	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|557694920|ref|YP_008797974.1|	-	0.11	12.8	0.4	0.27	11.5	0.1	1.6	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|557694920|ref|YP_008797974.1|	-	0.11	11.6	0.1	0.18	10.9	0.1	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
SRPRB	PF09439.5	gi|557694920|ref|YP_008797974.1|	-	0.13	11.4	0.4	0.29	10.3	0.1	1.6	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
ThiW	PF09512.5	gi|557694921|ref|YP_008797975.1|	-	2.6e-31	108.4	19.1	2.2e-30	105.4	13.3	1.9	1	1	0	1	1	1	1	Thiamine-precursor	transporter	protein	(ThiW)
DUF3816	PF12822.2	gi|557694921|ref|YP_008797975.1|	-	1.8e-07	31.1	15.6	4.4e-07	29.9	10.8	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3816)
5TM-5TMR_LYT	PF07694.7	gi|557694921|ref|YP_008797975.1|	-	0.00099	18.4	13.9	0.00099	18.4	9.6	2.1	1	1	0	2	2	2	1	5TMR	of	5TMR-LYT
Romo1	PF10247.4	gi|557694921|ref|YP_008797975.1|	-	1.8	8.8	4.9	15	5.8	1.1	3.2	2	1	1	3	3	3	0	Reactive	mitochondrial	oxygen	species	modulator	1
GtrA	PF04138.9	gi|557694922|ref|YP_008797976.1|	-	3.1e-14	52.9	0.9	3.6e-14	52.6	0.6	1.1	1	0	0	1	1	1	1	GtrA-like	protein
SbmA_BacA	PF05992.7	gi|557694922|ref|YP_008797976.1|	-	0.082	12.0	1.4	4.1	6.5	0.1	2.0	1	1	1	2	2	2	0	SbmA/BacA-like	family
SURF4	PF02077.10	gi|557694922|ref|YP_008797976.1|	-	0.92	8.8	3.6	1.7	7.9	2.5	1.4	1	1	0	1	1	1	0	SURF4	family
IMS	PF00817.15	gi|557694923|ref|YP_008797977.1|	-	1e-42	145.4	0.3	1.7e-42	144.6	0.0	1.5	2	0	0	2	2	2	1	impB/mucB/samB	family
IMS_C	PF11799.3	gi|557694923|ref|YP_008797977.1|	-	1.7e-09	37.6	0.3	3.5e-09	36.6	0.2	1.5	1	0	0	1	1	1	1	impB/mucB/samB	family	C-terminal	domain
HHH_5	PF14520.1	gi|557694923|ref|YP_008797977.1|	-	3.3e-07	30.3	0.3	1.2e-06	28.5	0.0	2.2	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
IMS_HHH	PF11798.3	gi|557694923|ref|YP_008797977.1|	-	3.8e-07	29.7	0.0	1e-06	28.3	0.0	1.8	1	0	0	1	1	1	1	IMS	family	HHH	motif
TfoX_C	PF04994.8	gi|557694923|ref|YP_008797977.1|	-	0.017	14.9	0.1	0.095	12.6	0.0	2.2	2	0	0	2	2	2	0	TfoX	C-terminal	domain
Hist_deacetyl	PF00850.14	gi|557694924|ref|YP_008797978.1|	-	2.8e-74	250.2	0.0	3.2e-74	250.0	0.0	1.0	1	0	0	1	1	1	1	Histone	deacetylase	domain
DUF99	PF01949.11	gi|557694925|ref|YP_008797979.1|	-	3.2e-53	179.6	0.0	3.8e-53	179.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Lambda_tail_I	PF06805.7	gi|557694925|ref|YP_008797979.1|	-	0.12	12.1	0.0	0.39	10.5	0.0	1.8	2	0	0	2	2	2	0	Bacteriophage	lambda	tail	assembly	protein	I
NTP_transferase	PF00483.18	gi|557694926|ref|YP_008797980.1|	-	1e-30	106.8	0.0	1.2e-30	106.6	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|557694926|ref|YP_008797980.1|	-	1.8e-15	57.3	0.0	2.4e-15	56.9	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|557694926|ref|YP_008797980.1|	-	3.4e-10	38.9	1.4	0.00039	19.8	0.1	4.0	2	1	1	4	4	4	3	Bacterial	transferase	hexapeptide	(six	repeats)
IspD	PF01128.14	gi|557694926|ref|YP_008797980.1|	-	4.6e-05	23.0	0.0	8.5e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Glycos_transf_2	PF00535.21	gi|557694926|ref|YP_008797980.1|	-	0.0075	15.9	0.0	0.011	15.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Hexapep_2	PF14602.1	gi|557694926|ref|YP_008797980.1|	-	2.5	7.7	11.9	0.25	10.9	0.7	4.2	3	2	1	4	4	4	0	Hexapeptide	repeat	of	succinyl-transferase
TP_methylase	PF00590.15	gi|557694927|ref|YP_008797981.1|	-	4.8e-23	81.9	0.0	7.2e-23	81.3	0.0	1.3	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF357	PF04010.8	gi|557694927|ref|YP_008797981.1|	-	1.5e-10	40.6	1.9	2.9e-10	39.6	0.2	2.4	4	0	0	4	4	4	1	Protein	of	unknown	function	(DUF357)
PHY	PF00360.15	gi|557694927|ref|YP_008797981.1|	-	0.1	11.7	0.0	0.16	11.0	0.0	1.3	1	0	0	1	1	1	0	Phytochrome	region
DIL	PF01843.14	gi|557694927|ref|YP_008797981.1|	-	0.12	12.2	0.2	0.37	10.6	0.1	1.7	2	0	0	2	2	2	0	DIL	domain
DUF2990	PF11693.3	gi|557694927|ref|YP_008797981.1|	-	0.14	12.0	0.0	0.46	10.3	0.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2990)
CTP_transf_2	PF01467.21	gi|557694928|ref|YP_008797982.1|	-	5.5e-16	59.0	0.0	6.5e-16	58.7	0.0	1.1	1	0	0	1	1	1	1	Cytidylyltransferase
FAD_syn	PF06574.7	gi|557694928|ref|YP_008797982.1|	-	3.8e-07	29.8	0.4	3.3e-06	26.8	0.2	2.1	1	1	1	2	2	2	1	FAD	synthetase
CTP-dep_RFKase	PF01982.11	gi|557694929|ref|YP_008797983.1|	-	1.1e-28	99.3	0.1	1.6e-28	98.7	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
HTH_Crp_2	PF13545.1	gi|557694929|ref|YP_008797983.1|	-	0.00056	19.6	0.2	0.0011	18.7	0.1	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR_2	PF12802.2	gi|557694929|ref|YP_008797983.1|	-	0.0014	18.2	0.4	0.0029	17.2	0.3	1.6	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|557694929|ref|YP_008797983.1|	-	0.0017	18.0	0.3	0.0035	16.9	0.2	1.5	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|557694929|ref|YP_008797983.1|	-	0.0061	16.8	0.2	0.011	16.0	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Rrf2	PF02082.15	gi|557694929|ref|YP_008797983.1|	-	0.073	13.2	0.2	0.14	12.2	0.1	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_20	PF12840.2	gi|557694929|ref|YP_008797983.1|	-	0.078	12.7	0.2	0.18	11.6	0.2	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
Proteasome	PF00227.21	gi|557694930|ref|YP_008797984.1|	-	3.1e-47	160.3	0.3	3.7e-47	160.0	0.2	1.0	1	0	0	1	1	1	1	Proteasome	subunit
RTC	PF01137.16	gi|557694931|ref|YP_008797985.1|	-	4.1e-75	251.4	0.1	4.7e-75	251.2	0.1	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.8	gi|557694931|ref|YP_008797985.1|	-	3.8e-21	75.0	0.1	6.4e-21	74.3	0.1	1.4	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
CTP_transf_2	PF01467.21	gi|557694932|ref|YP_008797986.1|	-	1.3e-13	51.2	0.0	1.7e-13	50.9	0.0	1.1	1	0	0	1	1	1	1	Cytidylyltransferase
FAD_syn	PF06574.7	gi|557694932|ref|YP_008797986.1|	-	0.15	11.6	0.0	0.27	10.8	0.0	1.4	1	0	0	1	1	1	0	FAD	synthetase
SAM_adeno_trans	PF01887.11	gi|557694933|ref|YP_008797987.1|	-	3.8e-78	262.0	0.1	4.3e-78	261.9	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
PTH2	PF01981.11	gi|557694934|ref|YP_008797988.1|	-	7.6e-43	144.8	0.0	8.4e-43	144.7	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Rhomboid	PF01694.17	gi|557694935|ref|YP_008797989.1|	-	2e-30	105.7	16.8	2e-30	105.7	11.7	1.9	2	0	0	2	2	2	1	Rhomboid	family
DUF1751	PF08551.5	gi|557694935|ref|YP_008797989.1|	-	0.018	15.3	3.3	0.018	15.3	2.3	2.9	2	1	1	3	3	3	0	Eukaryotic	integral	membrane	protein	(DUF1751)
DUF1049	PF06305.6	gi|557694935|ref|YP_008797989.1|	-	5.2	6.6	13.1	1.1	8.7	0.1	3.8	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1049)
TraS	PF10624.4	gi|557694935|ref|YP_008797989.1|	-	6.1	6.3	9.1	2	7.9	2.6	2.2	2	0	0	2	2	2	0	Plasmid	conjugative	transfer	entry	exclusion	protein	TraS
Oxidored_q6	PF01058.17	gi|557694936|ref|YP_008797990.1|	-	3.2e-27	94.7	0.0	4e-27	94.3	0.0	1.1	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Complex1_30kDa	PF00329.14	gi|557694937|ref|YP_008797991.1|	-	1.2e-30	105.7	0.0	1.7e-30	105.3	0.0	1.2	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Propep_M14	PF02244.11	gi|557694937|ref|YP_008797991.1|	-	0.0055	16.3	0.1	0.0096	15.5	0.0	1.4	1	1	0	1	1	1	1	Carboxypeptidase	activation	peptide
Complex1_49kDa	PF00346.14	gi|557694938|ref|YP_008797992.1|	-	1.6e-57	194.6	0.1	4.5e-36	124.2	0.1	3.1	1	1	2	3	3	3	3	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
DNA_pol_B	PF00136.16	gi|557694939|ref|YP_008797993.1|	-	1.4e-89	301.0	0.0	1.9e-89	300.5	0.0	1.1	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|557694939|ref|YP_008797993.1|	-	5.3e-27	94.5	0.0	1.2e-26	93.3	0.0	1.6	2	0	0	2	2	2	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|557694939|ref|YP_008797993.1|	-	1.4e-06	28.2	0.0	9e-06	25.5	0.0	2.3	2	1	0	2	2	2	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|557694939|ref|YP_008797993.1|	-	0.00011	21.7	0.0	0.00036	20.1	0.0	1.8	2	0	0	2	2	2	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
Arginase	PF00491.16	gi|557694940|ref|YP_008797994.1|	-	8.1e-71	238.5	0.0	9.2e-71	238.3	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
IPPT	PF01715.12	gi|557694940|ref|YP_008797994.1|	-	0.045	12.7	0.0	0.12	11.4	0.0	1.7	2	0	0	2	2	2	0	IPP	transferase
Mannosyl_trans	PF05007.8	gi|557694941|ref|YP_008797995.1|	-	0.00018	21.2	10.7	0.014	15.0	7.4	2.5	1	1	0	1	1	1	1	Mannosyltransferase	(PIG-M)
Nol1_Nop2_Fmu_2	PF13636.1	gi|557694942|ref|YP_008797996.1|	-	7.4e-07	29.1	0.0	1e-06	28.7	0.0	1.3	1	0	0	1	1	1	1	pre-rRNA	processing	and	ribosome	biogenesis
TruB-C_2	PF09157.6	gi|557694942|ref|YP_008797996.1|	-	0.09	12.6	0.0	0.26	11.1	0.0	1.8	1	1	0	1	1	1	0	Pseudouridine	synthase	II	TruB,	C-terminal
Nol1_Nop2_Fmu	PF01189.12	gi|557694943|ref|YP_008797997.1|	-	7.3e-40	137.1	0.0	1.2e-39	136.4	0.0	1.3	1	1	0	1	1	1	1	NOL1/NOP2/sun	family
FtsJ	PF01728.14	gi|557694943|ref|YP_008797997.1|	-	2.1e-06	27.8	0.0	3.5e-06	27.1	0.0	1.3	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
PCMT	PF01135.14	gi|557694943|ref|YP_008797997.1|	-	0.00031	20.3	0.0	0.00053	19.5	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|557694943|ref|YP_008797997.1|	-	0.0036	17.8	0.0	0.0071	16.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|557694943|ref|YP_008797997.1|	-	0.022	14.7	0.0	0.032	14.2	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Met_10	PF02475.11	gi|557694943|ref|YP_008797997.1|	-	0.034	13.7	0.0	0.051	13.1	0.0	1.2	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_31	PF13847.1	gi|557694943|ref|YP_008797997.1|	-	0.035	13.6	0.0	0.081	12.5	0.0	1.5	1	1	0	1	1	1	0	Methyltransferase	domain
Fibrillarin	PF01269.12	gi|557694943|ref|YP_008797997.1|	-	0.12	11.3	0.0	0.2	10.5	0.0	1.3	1	0	0	1	1	1	0	Fibrillarin
Ubie_methyltran	PF01209.13	gi|557694943|ref|YP_008797997.1|	-	0.19	10.8	0.0	0.42	9.6	0.0	1.5	2	0	0	2	2	2	0	ubiE/COQ5	methyltransferase	family
HhH-GPD	PF00730.20	gi|557694944|ref|YP_008797998.1|	-	0.0084	16.3	0.0	0.014	15.6	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
AAA_10	PF12846.2	gi|557694945|ref|YP_008797999.1|	-	3.3e-15	56.3	0.2	5.3e-13	49.0	0.2	2.1	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|557694945|ref|YP_008797999.1|	-	7.8e-15	55.3	0.0	1.8e-14	54.1	0.0	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_25	PF13481.1	gi|557694945|ref|YP_008797999.1|	-	0.0055	16.1	0.0	0.011	15.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|557694945|ref|YP_008797999.1|	-	0.015	13.9	0.0	0.03	12.9	0.0	1.4	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_29	PF13555.1	gi|557694945|ref|YP_008797999.1|	-	0.017	14.6	0.3	0.58	9.7	0.1	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|557694945|ref|YP_008797999.1|	-	0.021	14.5	0.8	0.052	13.2	0.3	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MEKHLA	PF08670.6	gi|557694945|ref|YP_008797999.1|	-	0.039	13.4	0.0	12	5.4	0.0	3.1	3	0	0	3	3	3	0	MEKHLA	domain
NurA	PF09376.5	gi|557694946|ref|YP_008798000.1|	-	6.5e-06	25.8	0.0	0.00018	21.1	0.0	2.6	2	1	0	2	2	2	1	NurA	domain
H-kinase_dim	PF02895.9	gi|557694946|ref|YP_008798000.1|	-	0.17	12.2	1.6	0.39	11.0	1.1	1.6	1	0	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
Med16	PF11635.3	gi|557694946|ref|YP_008798000.1|	-	0.27	9.1	1.5	0.37	8.6	0.2	1.7	2	0	0	2	2	2	0	Mediator	complex	subunit	16
Penicillinase_R	PF03965.11	gi|557694947|ref|YP_008798001.1|	-	0.0073	16.3	0.1	0.019	15.0	0.0	1.7	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_20	PF12840.2	gi|557694948|ref|YP_008798002.1|	-	0.014	15.1	0.1	0.025	14.3	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_1	PF00126.22	gi|557694948|ref|YP_008798002.1|	-	0.036	13.7	0.0	0.074	12.7	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Rio2_N	PF09202.6	gi|557694948|ref|YP_008798002.1|	-	0.038	14.0	0.0	0.083	12.9	0.0	1.5	1	0	0	1	1	1	0	Rio2,	N-terminal
HTH_12	PF08461.5	gi|557694948|ref|YP_008798002.1|	-	0.062	13.0	0.0	0.14	11.8	0.0	1.6	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
MarR_2	PF12802.2	gi|557694948|ref|YP_008798002.1|	-	0.067	12.8	0.1	0.12	12.0	0.0	1.5	1	0	0	1	1	1	0	MarR	family
HTH_24	PF13412.1	gi|557694949|ref|YP_008798003.1|	-	0.004	16.5	0.0	0.0071	15.7	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|557694949|ref|YP_008798003.1|	-	0.046	13.4	0.0	0.079	12.6	0.0	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
PaaX	PF07848.7	gi|557694949|ref|YP_008798003.1|	-	0.088	12.8	0.1	0.21	11.6	0.0	1.8	2	1	0	2	2	2	0	PaaX-like	protein
Cytochrom_B_N	PF00033.14	gi|557694950|ref|YP_008798004.1|	-	0.0024	17.2	0.0	0.0028	17.0	0.0	1.0	1	0	0	1	1	1	1	Cytochrome	b(N-terminal)/b6/petB
Sulfate_tra_GLY	PF13792.1	gi|557694950|ref|YP_008798004.1|	-	0.023	14.3	3.0	0.026	14.1	2.1	1.1	1	0	0	1	1	1	0	Sulfate	transporter	N-terminal	domain	with	GLY	motif
DUF2613	PF11021.3	gi|557694950|ref|YP_008798004.1|	-	0.042	13.5	0.6	0.12	12.1	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2613)
IncA	PF04156.9	gi|557694950|ref|YP_008798004.1|	-	7	6.2	9.0	14	5.2	6.2	1.6	1	1	0	1	1	1	0	IncA	protein
DUF4414	PF14377.1	gi|557694951|ref|YP_008798005.1|	-	0.078	12.9	0.3	0.08	12.8	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4414)
FrhB_FdhB_C	PF04432.8	gi|557694952|ref|YP_008798006.1|	-	1.5e-39	135.0	1.1	5.6e-39	133.1	0.0	2.2	2	1	0	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.8	gi|557694952|ref|YP_008798006.1|	-	2.5e-24	84.9	0.1	6.5e-24	83.6	0.0	1.7	2	0	0	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_10	PF13237.1	gi|557694952|ref|YP_008798006.1|	-	4.3e-09	36.0	8.9	1e-08	34.8	6.2	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|557694952|ref|YP_008798006.1|	-	7.5e-09	35.4	0.8	0.0043	17.0	0.1	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|557694952|ref|YP_008798006.1|	-	2.5e-08	33.1	14.7	0.00013	21.4	2.7	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|557694952|ref|YP_008798006.1|	-	2.1e-07	31.0	10.9	5.4e-07	29.7	7.5	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|557694952|ref|YP_008798006.1|	-	5.6e-07	30.2	3.6	0.021	15.5	0.3	2.6	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.2	gi|557694952|ref|YP_008798006.1|	-	6.1e-07	29.7	13.3	6.1e-07	29.7	9.2	2.1	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|557694952|ref|YP_008798006.1|	-	7.3e-07	28.7	13.9	0.00067	19.4	2.3	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|557694952|ref|YP_008798006.1|	-	5.2e-06	26.7	7.7	0.011	16.0	0.4	3.0	3	0	0	3	3	2	2	4Fe-4S	single	cluster	domain
Fer4_2	PF12797.2	gi|557694952|ref|YP_008798006.1|	-	4.3e-05	23.1	21.0	0.00047	19.9	1.4	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|557694952|ref|YP_008798006.1|	-	0.00011	22.4	19.9	0.03	14.8	5.0	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|557694952|ref|YP_008798006.1|	-	0.00022	21.5	14.2	0.026	14.9	2.4	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|557694952|ref|YP_008798006.1|	-	0.00024	21.1	17.8	0.0065	16.7	0.4	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|557694952|ref|YP_008798006.1|	-	0.00037	20.3	14.9	0.02	14.7	10.6	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|557694952|ref|YP_008798006.1|	-	0.0011	19.4	11.7	0.035	14.6	1.4	2.7	1	1	1	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|557694952|ref|YP_008798006.1|	-	0.0018	18.5	15.1	0.059	13.7	1.6	2.6	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
DNA_gyraseA_C	PF03989.8	gi|557694952|ref|YP_008798006.1|	-	0.11	11.7	0.1	0.23	10.7	0.0	1.5	1	0	0	1	1	1	0	DNA	gyrase	C-terminal	domain,	beta-propeller
UPF0054	PF02130.12	gi|557694953|ref|YP_008798007.1|	-	0.028	13.7	0.0	0.036	13.3	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	family	UPF0054
Peptidase_M10	PF00413.19	gi|557694953|ref|YP_008798007.1|	-	0.13	12.0	0.1	0.27	10.9	0.1	1.4	1	1	0	1	1	1	0	Matrixin
DUF1025	PF06262.6	gi|557694953|ref|YP_008798007.1|	-	0.13	12.0	0.0	0.27	11.0	0.0	1.6	1	0	0	1	1	1	0	Possibl	zinc	metallo-peptidase
Fer4	PF00037.22	gi|557694954|ref|YP_008798008.1|	-	9.9e-13	47.1	14.2	1.3e-06	27.7	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|557694954|ref|YP_008798008.1|	-	3.3e-10	40.1	27.0	2.6e-06	27.7	6.8	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|557694954|ref|YP_008798008.1|	-	2.7e-09	37.1	4.1	8.3e-09	35.5	2.8	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|557694954|ref|YP_008798008.1|	-	6e-08	32.6	9.8	2.4e-06	27.4	3.4	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|557694954|ref|YP_008798008.1|	-	7.7e-08	32.0	5.1	1.9e-07	30.7	3.6	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|557694954|ref|YP_008798008.1|	-	1.3e-06	28.0	14.5	0.0031	17.3	3.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|557694954|ref|YP_008798008.1|	-	2.6e-06	27.1	4.2	0.0051	16.6	0.4	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|557694954|ref|YP_008798008.1|	-	2e-05	24.5	7.3	0.029	14.7	1.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|557694954|ref|YP_008798008.1|	-	2.7e-05	23.8	10.4	0.01	15.7	1.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|557694954|ref|YP_008798008.1|	-	3.9e-05	24.3	7.0	0.11	13.3	2.8	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.1	gi|557694954|ref|YP_008798008.1|	-	6.6e-05	23.2	4.4	0.0092	16.3	0.1	2.3	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|557694954|ref|YP_008798008.1|	-	0.00016	21.9	13.1	0.017	15.6	3.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|557694954|ref|YP_008798008.1|	-	0.00016	21.9	4.8	0.0011	19.2	3.8	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|557694954|ref|YP_008798008.1|	-	0.0019	18.7	11.5	0.0087	16.6	0.2	2.8	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|557694954|ref|YP_008798008.1|	-	0.013	15.8	12.1	0.044	14.1	0.2	2.7	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
B3_4	PF03483.12	gi|557694955|ref|YP_008798009.1|	-	2.4e-26	92.2	0.0	3.8e-26	91.6	0.0	1.3	1	0	0	1	1	1	1	B3/4	domain
CBS	PF00571.23	gi|557694956|ref|YP_008798010.1|	-	3.4e-36	122.7	0.2	3.3e-17	61.9	0.0	2.1	2	0	0	2	2	2	2	CBS	domain
IF3_N	PF05198.11	gi|557694956|ref|YP_008798010.1|	-	0.095	12.6	0.0	5.9	6.8	0.0	2.4	2	0	0	2	2	2	0	Translation	initiation	factor	IF-3,	N-terminal	domain
AFOR_C	PF01314.13	gi|557694957|ref|YP_008798011.1|	-	4.7e-69	232.9	0.1	6.2e-69	232.5	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|557694957|ref|YP_008798011.1|	-	1.1e-48	165.3	0.2	1.9e-48	164.5	0.1	1.4	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
Aldo_ket_red	PF00248.16	gi|557694958|ref|YP_008798012.1|	-	1.2e-73	247.4	0.0	1.4e-73	247.1	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
RHH_1	PF01402.16	gi|557694958|ref|YP_008798012.1|	-	0.082	12.8	0.0	15	5.6	0.0	2.6	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
DZR	PF12773.2	gi|557694959|ref|YP_008798013.1|	-	2.8e-07	30.2	2.5	5.5e-07	29.3	1.8	1.5	1	1	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|557694959|ref|YP_008798013.1|	-	0.00089	18.6	1.0	0.00089	18.6	0.7	2.6	3	0	0	3	3	3	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|557694959|ref|YP_008798013.1|	-	0.0016	17.5	1.3	0.0016	17.5	0.9	3.0	3	0	0	3	3	3	1	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|557694959|ref|YP_008798013.1|	-	0.019	14.0	1.8	0.019	14.0	1.3	2.4	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
zf-C3HC4_3	PF13920.1	gi|557694959|ref|YP_008798013.1|	-	0.04	13.5	6.0	0.75	9.5	0.1	2.8	2	1	1	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF1358	PF07096.6	gi|557694959|ref|YP_008798013.1|	-	0.077	12.6	0.5	0.16	11.6	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1358)
Zn_Tnp_IS1595	PF12760.2	gi|557694959|ref|YP_008798013.1|	-	0.51	10.1	5.1	3.6	7.4	0.4	2.5	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zinc-ribbons_6	PF07191.7	gi|557694959|ref|YP_008798013.1|	-	0.73	9.6	4.8	4.7	7.0	3.4	2.0	1	1	1	2	2	2	0	zinc-ribbons
zf-LITAF-like	PF10601.4	gi|557694959|ref|YP_008798013.1|	-	0.91	9.4	6.0	1.3	8.9	1.5	2.5	2	0	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
FYVE	PF01363.16	gi|557694959|ref|YP_008798013.1|	-	1.5	8.8	5.2	4.2	7.3	0.1	2.2	1	1	1	2	2	2	0	FYVE	zinc	finger
zf-DHHC	PF01529.15	gi|557694959|ref|YP_008798013.1|	-	1.8	7.9	8.8	0.37	10.1	0.3	2.5	1	1	1	2	2	2	0	DHHC	palmitoyltransferase
DUF2256	PF10013.4	gi|557694959|ref|YP_008798013.1|	-	2	8.2	0.0	2	8.2	0.0	3.1	2	2	2	4	4	4	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
Mu-like_Com	PF10122.4	gi|557694959|ref|YP_008798013.1|	-	4.3	6.4	6.6	3.6	6.7	0.7	2.6	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
DNA_RNApol_7kD	PF03604.8	gi|557694959|ref|YP_008798013.1|	-	9.2	5.8	9.4	4.7	6.7	0.1	2.7	2	1	1	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF3855	PF12967.2	gi|557694961|ref|YP_008798015.1|	-	0.029	13.9	0.0	0.033	13.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	Unknown	Function	with	PDB	structure	(DUF3855)
DUF4364	PF14277.1	gi|557694962|ref|YP_008798016.1|	-	0.0094	15.5	0.7	0.51	9.9	0.1	2.1	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4364)
Vip3A_N	PF12495.3	gi|557694962|ref|YP_008798016.1|	-	0.055	13.1	0.2	0.077	12.6	0.1	1.3	1	0	0	1	1	1	0	Vegetative	insecticide	protein	3A	N	terminal
HTH_20	PF12840.2	gi|557694962|ref|YP_008798016.1|	-	0.062	13.1	0.1	0.11	12.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Chordopox_L2	PF05803.7	gi|557694962|ref|YP_008798016.1|	-	0.27	10.8	1.9	0.3	10.7	0.2	1.9	2	1	1	3	3	3	0	Chordopoxvirus	L2	protein
HSP20	PF00011.16	gi|557694963|ref|YP_008798017.1|	-	6.8e-13	48.3	0.0	1.1e-12	47.6	0.0	1.4	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
PIH1	PF08190.7	gi|557694963|ref|YP_008798017.1|	-	5.1e-05	22.8	0.0	6.6e-05	22.5	0.0	1.1	1	0	0	1	1	1	1	pre-RNA	processing	PIH1/Nop17
PAC2	PF09754.4	gi|557694964|ref|YP_008798018.1|	-	7.5e-32	110.9	0.0	9e-32	110.7	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
AMP-binding	PF00501.23	gi|557694965|ref|YP_008798019.1|	-	6.1e-94	314.7	0.0	7.9e-94	314.4	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|557694965|ref|YP_008798019.1|	-	1.5e-22	80.3	0.1	1.5e-22	80.3	0.1	1.9	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
5-FTHF_cyc-lig	PF01812.15	gi|557694966|ref|YP_008798020.1|	-	1.7e-30	106.2	0.0	2e-30	105.9	0.0	1.1	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
bact-PGI_C	PF10432.4	gi|557694967|ref|YP_008798021.1|	-	1e-27	96.7	0.0	1.6e-27	96.0	0.0	1.3	1	0	0	1	1	1	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
SIS	PF01380.17	gi|557694967|ref|YP_008798021.1|	-	0.00039	20.0	0.2	1.1	8.8	0.0	3.1	2	2	0	2	2	2	2	SIS	domain
MoCF_biosynth	PF00994.19	gi|557694968|ref|YP_008798022.1|	-	1.1e-34	118.8	0.0	1.7e-34	118.2	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
Paf67	PF10255.4	gi|557694968|ref|YP_008798022.1|	-	0.059	12.2	0.1	0.078	11.8	0.1	1.1	1	0	0	1	1	1	0	RNA	polymerase	I-associated	factor	PAF67
Metallophos_2	PF12850.2	gi|557694969|ref|YP_008798023.1|	-	1.5e-17	63.8	0.0	2e-17	63.4	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|557694969|ref|YP_008798023.1|	-	1.6e-16	60.2	0.1	2.3e-13	49.9	0.0	2.2	1	1	1	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
Metallophos	PF00149.23	gi|557694969|ref|YP_008798023.1|	-	1.1e-10	41.2	0.0	1.7e-10	40.6	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
CBS	PF00571.23	gi|557694970|ref|YP_008798024.1|	-	4.8e-27	93.4	6.7	5.6e-14	51.6	0.7	2.2	2	0	0	2	2	2	2	CBS	domain
Prok-RING_1	PF14446.1	gi|557694970|ref|YP_008798024.1|	-	0.002	17.8	5.6	0.0067	16.1	3.9	1.8	1	1	0	1	1	1	1	Prokaryotic	RING	finger	family	1
zf-BED	PF02892.10	gi|557694970|ref|YP_008798024.1|	-	0.092	12.5	3.7	3.3	7.5	0.7	2.3	2	0	0	2	2	2	0	BED	zinc	finger
zinc_ribbon_2	PF13240.1	gi|557694970|ref|YP_008798024.1|	-	0.13	11.8	4.7	1.3	8.6	0.1	2.5	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|557694970|ref|YP_008798024.1|	-	0.26	10.5	3.1	1.9	7.8	0.0	2.7	2	1	1	3	3	3	0	zinc-ribbon	domain
Ribosomal_S27e	PF01667.12	gi|557694970|ref|YP_008798024.1|	-	3.7	7.1	6.6	2	7.9	2.1	2.3	2	1	1	3	3	3	0	Ribosomal	protein	S27
2-Hacid_dh_C	PF02826.14	gi|557694971|ref|YP_008798025.1|	-	7.4e-41	139.2	0.0	1.1e-40	138.7	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|557694971|ref|YP_008798025.1|	-	6.8e-13	48.2	0.0	8.5e-13	47.9	0.0	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|557694971|ref|YP_008798025.1|	-	4.2e-06	26.7	0.1	9.2e-06	25.5	0.1	1.5	1	1	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
IlvN	PF07991.7	gi|557694971|ref|YP_008798025.1|	-	3.4e-05	23.2	0.0	0.00016	21.0	0.0	2.1	2	1	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|557694971|ref|YP_008798025.1|	-	0.0023	17.8	0.0	0.0045	16.8	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Pyr_redox	PF00070.22	gi|557694971|ref|YP_008798025.1|	-	0.01	16.1	0.2	0.022	15.1	0.1	1.6	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Shikimate_DH	PF01488.15	gi|557694971|ref|YP_008798025.1|	-	0.015	15.4	0.3	0.16	12.0	0.2	2.4	1	1	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.1	gi|557694971|ref|YP_008798025.1|	-	0.027	14.7	0.2	0.084	13.1	0.0	1.9	2	0	0	2	2	2	0	Putative	NAD(P)-binding
F420_oxidored	PF03807.12	gi|557694971|ref|YP_008798025.1|	-	0.038	14.4	0.6	0.54	10.7	0.0	2.6	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox_2	PF07992.9	gi|557694971|ref|YP_008798025.1|	-	0.099	12.5	0.0	0.18	11.6	0.0	1.5	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
CPSase_L_chain	PF00289.17	gi|557694971|ref|YP_008798025.1|	-	0.14	12.2	0.2	0.4	10.8	0.1	1.8	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
TrkA_N	PF02254.13	gi|557694971|ref|YP_008798025.1|	-	0.28	11.1	1.8	1.1	9.3	0.6	2.5	2	1	0	2	2	2	0	TrkA-N	domain
HxlR	PF01638.12	gi|557694972|ref|YP_008798026.1|	-	7.2e-25	86.4	0.1	8.4e-25	86.2	0.1	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_5	PF01022.15	gi|557694972|ref|YP_008798026.1|	-	0.00073	19.1	0.0	0.0019	17.8	0.0	1.7	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|557694972|ref|YP_008798026.1|	-	0.003	17.2	0.0	0.0067	16.1	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|557694972|ref|YP_008798026.1|	-	0.0031	17.2	0.0	0.0061	16.3	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|557694972|ref|YP_008798026.1|	-	0.019	14.5	0.0	0.036	13.7	0.0	1.4	1	0	0	1	1	1	0	MarR	family
Crp	PF00325.15	gi|557694972|ref|YP_008798026.1|	-	0.028	13.8	0.2	0.046	13.1	0.2	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	crp	family
HTH_24	PF13412.1	gi|557694972|ref|YP_008798026.1|	-	0.044	13.1	0.2	0.087	12.2	0.1	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|557694972|ref|YP_008798026.1|	-	0.046	13.4	0.0	0.066	12.9	0.0	1.2	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_36	PF13730.1	gi|557694972|ref|YP_008798026.1|	-	0.096	12.8	0.1	0.17	12.0	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
DoxX	PF07681.7	gi|557694973|ref|YP_008798027.1|	-	1.6e-14	54.0	10.4	1.6e-14	54.0	7.2	2.2	1	1	1	2	2	2	1	DoxX
DoxX_2	PF13564.1	gi|557694973|ref|YP_008798027.1|	-	3.9e-10	39.6	5.1	3.9e-10	39.6	3.5	2.6	1	1	1	2	2	2	1	DoxX-like	family
DoxD	PF04173.8	gi|557694973|ref|YP_008798027.1|	-	0.008	15.8	11.5	0.018	14.7	0.1	2.6	2	1	0	3	3	3	2	TQO	small	subunit	DoxD
FxsA	PF04186.8	gi|557694973|ref|YP_008798027.1|	-	0.011	15.3	10.6	0.011	15.3	7.3	2.1	1	1	1	2	2	2	0	FxsA	cytoplasmic	membrane	protein
Fe_dep_repress	PF01325.14	gi|557694974|ref|YP_008798028.1|	-	8.9e-16	57.5	1.2	2.6e-15	56.0	0.2	2.2	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.10	gi|557694974|ref|YP_008798028.1|	-	1.7e-09	37.1	2.8	1.9e-09	37.0	0.9	1.8	2	0	0	2	2	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
HTH_27	PF13463.1	gi|557694974|ref|YP_008798028.1|	-	3.1e-08	33.8	0.0	8.6e-08	32.4	0.0	1.8	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|557694974|ref|YP_008798028.1|	-	7.5e-07	28.7	0.1	3.5e-06	26.5	0.1	2.2	1	1	1	2	2	2	1	MarR	family
HTH_24	PF13412.1	gi|557694974|ref|YP_008798028.1|	-	1.5e-06	27.4	0.0	4.1e-06	26.0	0.0	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Penicillinase_R	PF03965.11	gi|557694974|ref|YP_008798028.1|	-	0.0002	21.4	0.2	0.00052	20.0	0.1	1.9	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_45	PF14947.1	gi|557694974|ref|YP_008798028.1|	-	0.00028	20.6	0.0	0.00046	19.9	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|557694974|ref|YP_008798028.1|	-	0.00045	19.8	0.9	0.0021	17.7	0.1	2.6	2	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_23	PF13384.1	gi|557694974|ref|YP_008798028.1|	-	0.00055	19.4	0.0	0.0016	18.0	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR	PF01047.17	gi|557694974|ref|YP_008798028.1|	-	0.00089	18.9	0.0	0.003	17.2	0.0	1.9	2	0	0	2	2	1	1	MarR	family
HTH_IclR	PF09339.5	gi|557694974|ref|YP_008798028.1|	-	0.0015	18.0	2.3	0.0029	17.1	0.0	2.8	5	0	0	5	5	1	1	IclR	helix-turn-helix	domain
HTH_29	PF13551.1	gi|557694974|ref|YP_008798028.1|	-	0.0035	17.4	1.5	0.13	12.4	0.1	2.6	1	1	1	2	2	2	2	Winged	helix-turn	helix
Topoisom_bac	PF01131.15	gi|557694974|ref|YP_008798028.1|	-	0.0038	16.1	0.0	0.0055	15.5	0.0	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
Exo70	PF03081.10	gi|557694974|ref|YP_008798028.1|	-	0.0081	14.9	0.2	0.012	14.4	0.2	1.3	1	1	0	1	1	1	1	Exo70	exocyst	complex	subunit
Rrf2	PF02082.15	gi|557694974|ref|YP_008798028.1|	-	0.0099	15.9	0.2	0.067	13.3	0.0	2.3	2	1	1	3	3	2	1	Transcriptional	regulator
PAX	PF00292.13	gi|557694974|ref|YP_008798028.1|	-	0.011	15.4	0.1	0.11	12.1	0.0	2.0	1	1	1	2	2	2	0	'Paired	box'	domain
Cullin_Nedd8	PF10557.4	gi|557694974|ref|YP_008798028.1|	-	0.014	15.2	0.0	0.081	12.7	0.0	2.3	2	0	0	2	2	2	0	Cullin	protein	neddylation	domain
HTH_7	PF02796.10	gi|557694974|ref|YP_008798028.1|	-	0.015	15.1	0.1	0.11	12.3	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
DUF2042	PF09743.4	gi|557694974|ref|YP_008798028.1|	-	0.02	14.2	0.1	0.069	12.4	0.1	1.9	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2042)
HTH_AsnC-type	PF13404.1	gi|557694974|ref|YP_008798028.1|	-	0.025	14.1	1.3	0.042	13.3	0.0	2.1	2	0	0	2	2	1	0	AsnC-type	helix-turn-helix	domain
Sigma54_DBD	PF04552.8	gi|557694974|ref|YP_008798028.1|	-	0.026	14.0	0.3	0.094	12.2	0.2	2.0	1	1	0	1	1	1	0	Sigma-54,	DNA	binding	domain
LexA_DNA_bind	PF01726.11	gi|557694974|ref|YP_008798028.1|	-	0.03	13.8	0.0	0.12	11.9	0.0	1.9	2	0	0	2	2	2	0	LexA	DNA	binding	domain
Phage_terminase	PF10668.4	gi|557694974|ref|YP_008798028.1|	-	0.032	14.0	0.0	0.061	13.1	0.0	1.4	1	0	0	1	1	1	0	Phage	terminase	small	subunit
HTH_28	PF13518.1	gi|557694974|ref|YP_008798028.1|	-	0.037	14.0	0.1	0.32	11.0	0.0	2.5	3	0	0	3	3	2	0	Helix-turn-helix	domain
Arfaptin	PF06456.8	gi|557694974|ref|YP_008798028.1|	-	0.045	13.1	0.6	2	7.7	0.1	2.0	2	0	0	2	2	2	0	Arfaptin-like	domain
HTH_Crp_2	PF13545.1	gi|557694974|ref|YP_008798028.1|	-	0.045	13.5	0.0	0.34	10.7	0.0	2.2	1	1	1	2	2	2	0	Crp-like	helix-turn-helix	domain
GPP34	PF05719.6	gi|557694974|ref|YP_008798028.1|	-	0.048	13.7	2.8	0.061	13.3	2.0	1.2	1	0	0	1	1	1	0	Golgi	phosphoprotein	3	(GPP34)
GntR	PF00392.16	gi|557694974|ref|YP_008798028.1|	-	0.054	12.9	0.9	0.46	9.9	0.0	2.9	3	1	0	3	3	3	0	Bacterial	regulatory	proteins,	gntR	family
PINIT	PF14324.1	gi|557694974|ref|YP_008798028.1|	-	0.058	13.4	0.0	0.1	12.6	0.0	1.4	1	0	0	1	1	1	0	PINIT	domain
EAP30	PF04157.11	gi|557694974|ref|YP_008798028.1|	-	0.061	12.4	0.2	0.67	9.0	0.0	2.1	2	0	0	2	2	2	0	EAP30/Vps36	family
CtsR	PF05848.6	gi|557694974|ref|YP_008798028.1|	-	0.073	13.0	0.1	0.23	11.4	0.0	1.8	1	1	0	1	1	1	0	Firmicute	transcriptional	repressor	of	class	III	stress	genes	(CtsR)
MIF4G_like_2	PF09090.6	gi|557694974|ref|YP_008798028.1|	-	0.084	12.0	0.1	0.13	11.4	0.1	1.3	1	0	0	1	1	1	0	MIF4G	like
HTH_11	PF08279.7	gi|557694974|ref|YP_008798028.1|	-	0.085	12.5	0.0	0.26	10.9	0.0	1.9	1	0	0	1	1	1	0	HTH	domain
FeoC	PF09012.5	gi|557694974|ref|YP_008798028.1|	-	0.13	12.0	0.0	0.78	9.4	0.0	2.2	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
HTH_36	PF13730.1	gi|557694974|ref|YP_008798028.1|	-	0.14	12.2	0.0	0.28	11.3	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|557694974|ref|YP_008798028.1|	-	0.15	12.2	2.4	2.7	8.2	0.1	3.1	2	1	0	2	2	2	0	Helix-turn-helix	domain
HMGL-like	PF00682.14	gi|557694975|ref|YP_008798029.1|	-	5.2e-40	137.5	0.1	7.1e-40	137.1	0.0	1.2	1	0	0	1	1	1	1	HMGL-like
Radical_SAM	PF04055.16	gi|557694975|ref|YP_008798029.1|	-	0.00088	19.4	0.5	1.8	8.7	0.0	2.9	3	1	1	4	4	4	2	Radical	SAM	superfamily
AP_endonuc_2	PF01261.19	gi|557694975|ref|YP_008798029.1|	-	0.01	15.1	0.2	0.021	14.1	0.1	1.7	1	1	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
CBS	PF00571.23	gi|557694976|ref|YP_008798030.1|	-	1.3e-33	114.4	12.8	3e-18	65.3	2.0	2.0	2	0	0	2	2	2	2	CBS	domain
Ribosomal_L44	PF00935.14	gi|557694977|ref|YP_008798031.1|	-	6.9e-14	51.6	2.6	1.5e-13	50.5	1.8	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L44
Ribosomal_L33	PF00471.15	gi|557694977|ref|YP_008798031.1|	-	0.016	15.4	0.6	0.016	15.4	0.4	2.0	2	0	0	2	2	2	0	Ribosomal	protein	L33
Metallothi_Euk2	PF12809.2	gi|557694977|ref|YP_008798031.1|	-	0.083	13.2	2.4	0.11	12.9	1.7	1.2	1	0	0	1	1	1	0	Eukaryotic	metallothionein
Ribosomal_S27e	PF01667.12	gi|557694978|ref|YP_008798032.1|	-	2.3e-18	65.4	1.0	2.6e-18	65.3	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
TF_Zn_Ribbon	PF08271.7	gi|557694978|ref|YP_008798032.1|	-	0.00037	19.7	0.5	0.00052	19.2	0.4	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
DUF3797	PF12677.2	gi|557694978|ref|YP_008798032.1|	-	0.0069	15.9	1.2	0.0069	15.9	0.8	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF3797)
Zn_Tnp_IS91	PF14319.1	gi|557694978|ref|YP_008798032.1|	-	0.016	14.7	0.1	0.019	14.4	0.1	1.1	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
zf-ribbon_3	PF13248.1	gi|557694978|ref|YP_008798032.1|	-	0.022	13.9	5.0	0.38	10.0	3.4	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
Rpr2	PF04032.11	gi|557694978|ref|YP_008798032.1|	-	0.022	14.6	0.3	1.4	8.8	0.0	2.1	2	0	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-C2H2_3	PF13878.1	gi|557694978|ref|YP_008798032.1|	-	0.022	14.3	0.3	1.1	8.8	0.1	2.1	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-C4_Topoisom	PF01396.14	gi|557694978|ref|YP_008798032.1|	-	0.027	13.9	0.6	1.5	8.3	0.0	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
HypA	PF01155.14	gi|557694978|ref|YP_008798032.1|	-	0.029	14.0	0.2	0.033	13.8	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
RRN7	PF11781.3	gi|557694978|ref|YP_008798032.1|	-	0.034	13.6	1.8	1.3	8.5	0.0	2.1	1	1	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Lar_restr_allev	PF14354.1	gi|557694978|ref|YP_008798032.1|	-	0.046	14.0	0.9	0.17	12.2	0.7	1.8	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zf-BED	PF02892.10	gi|557694978|ref|YP_008798032.1|	-	0.047	13.4	0.1	2	8.2	0.0	2.2	2	0	0	2	2	2	0	BED	zinc	finger
Desulfoferrod_N	PF06397.7	gi|557694978|ref|YP_008798032.1|	-	0.049	13.0	2.9	0.74	9.2	0.1	2.2	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
DUF4206	PF13901.1	gi|557694978|ref|YP_008798032.1|	-	0.065	12.7	0.2	0.072	12.6	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4206)
OrfB_Zn_ribbon	PF07282.6	gi|557694978|ref|YP_008798032.1|	-	0.087	12.4	0.3	0.12	11.9	0.2	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
C1_1	PF00130.17	gi|557694978|ref|YP_008798032.1|	-	0.089	12.5	0.5	0.12	12.1	0.4	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-UDP	PF14569.1	gi|557694978|ref|YP_008798032.1|	-	0.093	12.4	0.7	0.11	12.2	0.5	1.1	1	0	0	1	1	1	0	Zinc-binding	RING-finger
Prok-RING_1	PF14446.1	gi|557694978|ref|YP_008798032.1|	-	0.13	12.0	4.5	0.47	10.2	3.1	1.8	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
eIF-5_eIF-2B	PF01873.12	gi|557694978|ref|YP_008798032.1|	-	0.14	11.8	1.0	0.18	11.4	0.7	1.1	1	0	0	1	1	1	0	Domain	found	in	IF2B/IF5
zinc_ribbon_6	PF14599.1	gi|557694978|ref|YP_008798032.1|	-	0.16	11.7	2.2	0.33	10.7	1.6	1.6	1	1	0	1	1	1	0	Zinc-ribbon
DUF164	PF02591.10	gi|557694978|ref|YP_008798032.1|	-	0.18	11.6	1.0	10	6.0	0.0	2.1	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
TFIIS_C	PF01096.13	gi|557694978|ref|YP_008798032.1|	-	0.2	11.3	3.7	1.4	8.6	0.2	2.1	1	1	2	3	3	3	0	Transcription	factor	S-II	(TFIIS)
ZZ	PF00569.12	gi|557694978|ref|YP_008798032.1|	-	0.21	11.1	5.6	1.9	8.0	0.4	2.1	1	1	1	2	2	2	0	Zinc	finger,	ZZ	type
A2L_zn_ribbon	PF08792.5	gi|557694978|ref|YP_008798032.1|	-	0.52	9.8	6.0	1.9	8.0	4.1	1.7	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
RecR	PF02132.10	gi|557694978|ref|YP_008798032.1|	-	0.55	9.7	2.9	13	5.3	0.1	2.1	2	0	0	2	2	2	0	RecR	protein
zf-DNL	PF05180.7	gi|557694978|ref|YP_008798032.1|	-	0.61	9.8	3.1	1.3	8.8	0.2	2.0	1	1	1	2	2	2	0	DNL	zinc	finger
DNA_RNApol_7kD	PF03604.8	gi|557694978|ref|YP_008798032.1|	-	0.64	9.5	5.6	4.2	6.9	0.3	2.1	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_5	PF13719.1	gi|557694978|ref|YP_008798032.1|	-	1.7	8.2	4.8	14	5.3	3.3	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|557694978|ref|YP_008798032.1|	-	2.9	7.6	5.0	31	4.3	3.5	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|557694978|ref|YP_008798032.1|	-	5.5	6.1	5.8	7.1	5.8	0.4	2.2	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
S1	PF00575.18	gi|557694979|ref|YP_008798033.1|	-	4.1e-15	55.6	0.2	8.8e-15	54.5	0.1	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
EIF_2_alpha	PF07541.7	gi|557694979|ref|YP_008798033.1|	-	3.3e-14	52.5	0.4	1.3e-13	50.6	0.1	2.0	2	1	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
AAA_11	PF13086.1	gi|557694979|ref|YP_008798033.1|	-	0.019	14.5	0.6	0.023	14.3	0.4	1.2	1	0	0	1	1	1	0	AAA	domain
DUF2267	PF10025.4	gi|557694979|ref|YP_008798033.1|	-	0.1	12.6	0.4	0.1	12.6	0.3	2.0	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2267)
HHA	PF05321.6	gi|557694979|ref|YP_008798033.1|	-	2.1	8.5	6.5	43	4.3	0.2	3.8	2	1	1	3	3	3	0	Haemolysin	expression	modulating	protein
TauE	PF01925.14	gi|557694981|ref|YP_008798035.1|	-	4.1e-33	114.8	37.6	4.9e-33	114.5	26.1	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
FxsA	PF04186.8	gi|557694981|ref|YP_008798035.1|	-	2.3	7.8	10.7	0.19	11.3	2.9	2.4	2	0	0	2	2	2	0	FxsA	cytoplasmic	membrane	protein
Peptidase_M50	PF02163.17	gi|557694982|ref|YP_008798036.1|	-	3.1e-08	32.7	22.9	5.4e-08	32.0	12.9	3.0	1	1	1	2	2	2	1	Peptidase	family	M50
HSP20	PF00011.16	gi|557694983|ref|YP_008798037.1|	-	3.9e-05	23.4	0.0	6.2e-05	22.7	0.0	1.3	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
DNA_ligase_A_M	PF01068.16	gi|557694984|ref|YP_008798038.1|	-	7.6e-48	162.5	0.0	1.7e-47	161.4	0.0	1.6	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|557694984|ref|YP_008798038.1|	-	4e-23	82.1	0.3	1.7e-14	54.0	0.1	2.3	1	1	1	2	2	2	2	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|557694984|ref|YP_008798038.1|	-	1.3e-13	51.1	0.1	4.9e-13	49.3	0.0	2.1	2	0	0	2	2	2	1	ATP	dependent	DNA	ligase	C	terminal	region
HTH_15	PF12324.3	gi|557694984|ref|YP_008798038.1|	-	0.0047	16.5	0.0	0.018	14.7	0.0	2.0	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	alkylmercury	lyase
mRNA_cap_enzyme	PF01331.14	gi|557694984|ref|YP_008798038.1|	-	0.024	14.3	0.0	0.19	11.4	0.0	2.2	1	1	1	2	2	2	0	mRNA	capping	enzyme,	catalytic	domain
Got1	PF04178.7	gi|557694985|ref|YP_008798039.1|	-	0.045	13.8	0.3	0.045	13.8	0.2	2.9	1	1	2	3	3	3	0	Got1/Sft2-like	family
ABC_cobalt	PF09819.4	gi|557694985|ref|YP_008798039.1|	-	0.44	10.5	5.6	0.47	10.4	2.7	1.8	1	1	0	1	1	1	0	ABC-type	cobalt	transport	system,	permease	component
tRNA_bind	PF01588.15	gi|557694986|ref|YP_008798040.1|	-	1.8e-22	78.9	0.0	2.2e-22	78.7	0.0	1.1	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
tRNA-synt_2	PF00152.15	gi|557694987|ref|YP_008798041.1|	-	9.6e-79	264.5	0.0	1.7e-78	263.7	0.0	1.3	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|557694987|ref|YP_008798041.1|	-	6.6e-13	48.3	0.1	1.7e-12	46.9	0.0	1.7	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|557694987|ref|YP_008798041.1|	-	0.0015	17.7	0.1	0.23	10.6	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2b	PF00587.20	gi|557694987|ref|YP_008798041.1|	-	0.0024	17.4	0.0	1.6	8.3	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Methyltransf_26	PF13659.1	gi|557694988|ref|YP_008798042.1|	-	9.3e-17	61.1	0.0	1.3e-16	60.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|557694988|ref|YP_008798042.1|	-	1.5e-12	47.2	0.0	1.9e-12	46.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.7	gi|557694988|ref|YP_008798042.1|	-	5.3e-11	42.8	0.0	1.6e-10	41.3	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|557694988|ref|YP_008798042.1|	-	8.4e-11	41.6	0.0	1.1e-10	41.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|557694988|ref|YP_008798042.1|	-	2e-10	41.2	0.0	3.3e-10	40.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|557694988|ref|YP_008798042.1|	-	3.8e-09	36.9	0.0	8.2e-09	35.8	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|557694988|ref|YP_008798042.1|	-	4.1e-08	33.4	0.0	7.4e-08	32.6	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|557694988|ref|YP_008798042.1|	-	6.2e-05	22.7	0.0	8e-05	22.4	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|557694988|ref|YP_008798042.1|	-	8.7e-05	21.6	0.0	0.00015	20.8	0.0	1.4	1	0	0	1	1	1	1	Putative	methyltransferase
UPF0020	PF01170.13	gi|557694988|ref|YP_008798042.1|	-	0.00047	19.7	0.0	0.00092	18.8	0.0	1.5	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
PrmA	PF06325.8	gi|557694988|ref|YP_008798042.1|	-	0.00047	19.3	0.0	0.00066	18.8	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
TPMT	PF05724.6	gi|557694988|ref|YP_008798042.1|	-	0.00069	19.1	0.0	0.001	18.5	0.0	1.2	1	0	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
UPF0146	PF03686.8	gi|557694988|ref|YP_008798042.1|	-	0.0029	17.4	0.0	0.0048	16.7	0.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0146)
Ubie_methyltran	PF01209.13	gi|557694988|ref|YP_008798042.1|	-	0.0078	15.3	0.0	0.0091	15.1	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MetW	PF07021.7	gi|557694988|ref|YP_008798042.1|	-	0.022	14.1	0.0	0.028	13.7	0.0	1.2	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Methyltransf_5	PF01795.14	gi|557694988|ref|YP_008798042.1|	-	0.032	13.4	0.0	0.053	12.7	0.0	1.3	1	0	0	1	1	1	0	MraW	methylase	family
NodS	PF05401.6	gi|557694988|ref|YP_008798042.1|	-	0.036	13.4	0.0	0.058	12.7	0.0	1.3	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
N6_N4_Mtase	PF01555.13	gi|557694988|ref|YP_008798042.1|	-	0.08	12.4	0.2	0.28	10.6	0.0	1.9	2	1	0	2	2	2	0	DNA	methylase
N6_Mtase	PF02384.11	gi|557694988|ref|YP_008798042.1|	-	0.16	11.0	0.0	0.55	9.2	0.0	1.8	1	1	0	1	1	1	0	N-6	DNA	Methylase
AA_permease_2	PF13520.1	gi|557694989|ref|YP_008798043.1|	-	1.5e-34	119.2	41.5	1.5e-34	119.2	28.8	1.5	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|557694989|ref|YP_008798043.1|	-	5.7e-25	87.5	38.2	5.7e-25	87.5	26.5	1.8	1	1	0	2	2	2	1	Amino	acid	permease
AsnC_trans_reg	PF01037.16	gi|557694990|ref|YP_008798044.1|	-	4.3e-19	68.0	0.7	4.9e-19	67.8	0.5	1.1	1	0	0	1	1	1	1	AsnC	family
MoeA_N	PF03453.12	gi|557694991|ref|YP_008798045.1|	-	2.1e-42	144.2	0.0	3.1e-42	143.6	0.0	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|557694991|ref|YP_008798045.1|	-	3.2e-16	59.0	0.0	5e-16	58.3	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|557694991|ref|YP_008798045.1|	-	4.4e-05	23.3	0.0	0.00027	20.8	0.0	2.3	3	0	0	3	3	3	1	MoeA	C-terminal	region	(domain	IV)
XdhC_C	PF13478.1	gi|557694992|ref|YP_008798046.1|	-	1.2e-32	113.0	0.0	1.6e-32	112.6	0.0	1.2	1	0	0	1	1	1	1	XdhC	Rossmann	domain
XdhC_CoxI	PF02625.11	gi|557694992|ref|YP_008798046.1|	-	2.7e-18	65.3	0.1	4.8e-18	64.5	0.1	1.4	1	0	0	1	1	1	1	XdhC	and	CoxI	family
OTCace	PF00185.19	gi|557694992|ref|YP_008798046.1|	-	0.025	14.4	0.0	0.046	13.5	0.0	1.5	1	0	0	1	1	1	0	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
2-Hacid_dh_C	PF02826.14	gi|557694992|ref|YP_008798046.1|	-	0.055	12.6	0.0	0.096	11.8	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
VWA_CoxE	PF05762.9	gi|557694993|ref|YP_008798047.1|	-	1.2e-48	165.1	0.1	1.7e-48	164.6	0.0	1.1	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
VWA_2	PF13519.1	gi|557694993|ref|YP_008798047.1|	-	1.1e-06	28.8	0.0	1.7e-06	28.2	0.0	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|557694993|ref|YP_008798047.1|	-	0.0011	18.7	0.0	0.0018	18.0	0.0	1.2	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
NAD_binding_6	PF08030.7	gi|557694993|ref|YP_008798047.1|	-	0.051	13.4	0.0	3.5	7.4	0.0	2.2	2	0	0	2	2	2	0	Ferric	reductase	NAD	binding	domain
AAA_5	PF07728.9	gi|557694994|ref|YP_008798048.1|	-	2.3e-13	50.0	0.0	4.3e-13	49.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|557694994|ref|YP_008798048.1|	-	1.3e-10	41.5	0.0	3.4e-10	40.2	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_3	PF07726.6	gi|557694994|ref|YP_008798048.1|	-	2.2e-09	37.0	0.0	0.00092	18.8	0.0	2.3	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|557694994|ref|YP_008798048.1|	-	2.1e-06	28.0	0.0	6.9e-05	23.1	0.0	2.8	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|557694994|ref|YP_008798048.1|	-	7.9e-06	26.0	0.0	3.4e-05	24.0	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|557694994|ref|YP_008798048.1|	-	1.5e-05	25.0	0.2	0.00021	21.3	0.1	2.5	2	1	0	2	2	1	1	AAA	ATPase	domain
RuvB_N	PF05496.7	gi|557694994|ref|YP_008798048.1|	-	7.2e-05	21.9	0.1	0.12	11.4	0.0	2.3	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_19	PF13245.1	gi|557694994|ref|YP_008798048.1|	-	0.00036	20.2	0.0	0.001	18.7	0.0	1.8	2	0	0	2	2	2	1	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|557694994|ref|YP_008798048.1|	-	0.00038	20.5	0.0	0.0046	17.0	0.0	2.4	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|557694994|ref|YP_008798048.1|	-	0.00041	21.1	0.0	0.00084	20.1	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
Sigma54_activat	PF00158.21	gi|557694994|ref|YP_008798048.1|	-	0.00073	19.0	0.0	0.2	11.1	0.0	2.2	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_14	PF13173.1	gi|557694994|ref|YP_008798048.1|	-	0.0018	18.1	0.1	0.0098	15.7	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|557694994|ref|YP_008798048.1|	-	0.0018	18.4	0.0	0.018	15.1	0.0	2.1	1	1	0	1	1	1	1	RNA	helicase
NACHT	PF05729.7	gi|557694994|ref|YP_008798048.1|	-	0.0066	16.1	0.3	0.028	14.0	0.2	2.0	1	1	0	1	1	1	1	NACHT	domain
ABC_tran	PF00005.22	gi|557694994|ref|YP_008798048.1|	-	0.011	16.0	0.1	0.038	14.2	0.0	2.4	2	1	0	2	2	1	0	ABC	transporter
AAA_2	PF07724.9	gi|557694994|ref|YP_008798048.1|	-	0.012	15.5	0.0	0.042	13.7	0.0	1.8	1	1	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
Rad17	PF03215.10	gi|557694994|ref|YP_008798048.1|	-	0.014	14.0	0.1	0.025	13.2	0.0	1.3	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
Mg_chelatase	PF01078.16	gi|557694994|ref|YP_008798048.1|	-	0.024	13.7	0.0	0.044	12.9	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Zeta_toxin	PF06414.7	gi|557694994|ref|YP_008798048.1|	-	0.096	11.7	0.0	0.18	10.9	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
KTI12	PF08433.5	gi|557694994|ref|YP_008798048.1|	-	0.1	11.8	0.1	1.5	7.9	0.0	2.2	1	1	1	2	2	2	0	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.10	gi|557694994|ref|YP_008798048.1|	-	0.1	12.3	0.1	2	8.1	0.0	2.2	2	0	0	2	2	2	0	NTPase
HHH_3	PF12836.2	gi|557694994|ref|YP_008798048.1|	-	0.13	12.2	0.1	0.36	10.7	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
FAD_binding_5	PF00941.16	gi|557694995|ref|YP_008798049.1|	-	1.5e-46	157.9	0.0	2.5e-46	157.2	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|557694995|ref|YP_008798049.1|	-	7.4e-28	96.5	2.4	8.2e-28	96.3	0.8	1.8	2	0	0	2	2	2	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
FAD_binding_4	PF01565.18	gi|557694995|ref|YP_008798049.1|	-	0.057	12.8	0.0	0.11	12.0	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
Fer2_2	PF01799.15	gi|557694996|ref|YP_008798050.1|	-	6.2e-34	115.7	0.6	2.3e-33	113.9	0.0	1.9	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|557694996|ref|YP_008798050.1|	-	0.00012	21.7	0.1	0.00012	21.7	0.1	2.1	2	1	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
COXG	PF06240.8	gi|557694997|ref|YP_008798051.1|	-	2.9e-32	111.2	0.1	3.3e-32	111.0	0.1	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
Polyketide_cyc2	PF10604.4	gi|557694997|ref|YP_008798051.1|	-	7.5e-11	42.3	0.0	8.6e-11	42.1	0.0	1.0	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
AHSA1	PF08327.6	gi|557694997|ref|YP_008798051.1|	-	8.3e-05	22.6	0.0	0.00011	22.2	0.0	1.3	1	0	0	1	1	1	1	Activator	of	Hsp90	ATPase	homolog	1-like	protein
Polyketide_cyc	PF03364.15	gi|557694997|ref|YP_008798051.1|	-	0.0012	18.7	0.0	0.0018	18.2	0.0	1.5	1	1	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
GTP_EFTU	PF00009.22	gi|557694998|ref|YP_008798052.1|	-	8.7e-55	185.0	0.0	1.3e-54	184.5	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|557694998|ref|YP_008798052.1|	-	2.2e-27	95.0	0.1	7.5e-27	93.2	0.0	2.0	2	0	0	2	2	2	1	Elongation	factor	G,	domain	IV
EFG_C	PF00679.19	gi|557694998|ref|YP_008798052.1|	-	2.8e-21	75.1	0.0	7.6e-21	73.7	0.0	1.8	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
EFG_II	PF14492.1	gi|557694998|ref|YP_008798052.1|	-	1.9e-20	72.4	0.0	1.2e-19	69.9	0.0	2.3	3	0	0	3	3	3	1	Elongation	Factor	G,	domain	II
GTP_EFTU_D2	PF03144.20	gi|557694998|ref|YP_008798052.1|	-	1.2e-12	47.7	2.6	3.3e-12	46.3	1.8	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|557694998|ref|YP_008798052.1|	-	0.00015	21.6	0.1	0.00065	19.6	0.0	2.0	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
Ras	PF00071.17	gi|557694998|ref|YP_008798052.1|	-	0.027	13.8	0.0	0.052	12.9	0.0	1.4	1	0	0	1	1	1	0	Ras	family
IncA	PF04156.9	gi|557694999|ref|YP_008798053.1|	-	0.0024	17.4	13.3	0.0024	17.4	9.2	2.6	2	1	0	2	2	2	1	IncA	protein
DUF948	PF06103.6	gi|557694999|ref|YP_008798053.1|	-	0.011	15.6	4.5	0.14	11.9	0.2	3.0	2	1	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
TPR_MLP1_2	PF07926.7	gi|557694999|ref|YP_008798053.1|	-	0.018	14.7	42.9	0.043	13.5	14.9	3.3	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
Bacillus_HBL	PF05791.6	gi|557694999|ref|YP_008798053.1|	-	0.027	13.8	11.2	0.05	12.9	1.7	2.6	2	0	0	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
Lectin_N	PF03954.9	gi|557694999|ref|YP_008798053.1|	-	0.031	13.6	0.5	0.15	11.4	0.0	2.2	1	1	1	2	2	2	0	Hepatic	lectin,	N-terminal	domain
Reo_sigmaC	PF04582.7	gi|557694999|ref|YP_008798053.1|	-	0.091	11.9	0.9	4.2	6.4	0.1	2.1	1	1	0	2	2	2	0	Reovirus	sigma	C	capsid	protein
UPF0075	PF03702.9	gi|557694999|ref|YP_008798053.1|	-	0.1	11.4	2.1	0.13	11.1	0.3	1.9	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0075)
Laminin_II	PF06009.7	gi|557694999|ref|YP_008798053.1|	-	0.12	12.1	22.0	1.4	8.6	4.0	3.5	1	1	2	3	3	3	0	Laminin	Domain	II
Nup54	PF13874.1	gi|557694999|ref|YP_008798053.1|	-	0.55	9.8	37.7	0.54	9.9	7.6	3.8	2	1	1	3	3	3	0	Nucleoporin	complex	subunit	54
Spc7	PF08317.6	gi|557694999|ref|YP_008798053.1|	-	1.1	7.9	40.8	0.88	8.1	11.0	2.6	1	1	1	2	2	2	0	Spc7	kinetochore	protein
APG6	PF04111.7	gi|557694999|ref|YP_008798053.1|	-	1.4	7.8	43.1	0.49	9.3	10.6	2.9	1	1	1	3	3	3	0	Autophagy	protein	Apg6
Atg14	PF10186.4	gi|557694999|ref|YP_008798053.1|	-	2.1	7.2	40.6	3.5	6.5	12.3	2.4	1	1	1	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
COG5	PF10392.4	gi|557694999|ref|YP_008798053.1|	-	2.9	7.8	14.6	0.48	10.3	1.4	3.2	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
Mod_r	PF07200.8	gi|557694999|ref|YP_008798053.1|	-	3.1	7.6	35.5	0.17	11.7	6.9	3.7	2	2	1	3	3	3	0	Modifier	of	rudimentary	(Mod(r))	protein
DUF2400	PF09674.5	gi|557694999|ref|YP_008798053.1|	-	3.5	7.2	10.9	2.2	7.9	1.6	2.5	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2400)
GAS	PF13851.1	gi|557694999|ref|YP_008798053.1|	-	4.5	6.4	52.1	0.088	11.9	11.5	2.1	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Dna2	PF08696.6	gi|557694999|ref|YP_008798053.1|	-	5.1	6.3	9.5	0.51	9.6	0.9	2.5	2	1	0	2	2	2	0	DNA	replication	factor	Dna2
DUF972	PF06156.8	gi|557694999|ref|YP_008798053.1|	-	5.6	7.3	40.1	0.087	13.1	3.1	4.8	1	1	4	5	5	5	0	Protein	of	unknown	function	(DUF972)
MAD	PF05557.8	gi|557694999|ref|YP_008798053.1|	-	5.6	4.9	48.2	0.0087	14.2	23.3	2.0	1	1	1	2	2	2	0	Mitotic	checkpoint	protein
ATP_bind_1	PF03029.12	gi|557695000|ref|YP_008798054.1|	-	7.9e-53	179.4	0.0	8.9e-53	179.2	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_16	PF13191.1	gi|557695000|ref|YP_008798054.1|	-	7e-05	22.8	0.0	0.00014	21.8	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
CbiA	PF01656.18	gi|557695000|ref|YP_008798054.1|	-	0.00052	19.4	0.0	0.0007	19.0	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
SRP54	PF00448.17	gi|557695000|ref|YP_008798054.1|	-	0.0042	16.5	0.0	0.96	8.8	0.0	2.2	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
MMR_HSR1	PF01926.18	gi|557695000|ref|YP_008798054.1|	-	0.0044	16.9	0.0	0.012	15.5	0.0	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU	PF00009.22	gi|557695000|ref|YP_008798054.1|	-	0.0056	16.1	0.0	0.17	11.3	0.0	2.6	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
AAA_22	PF13401.1	gi|557695000|ref|YP_008798054.1|	-	0.014	15.5	0.0	0.069	13.2	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|557695000|ref|YP_008798054.1|	-	0.021	14.3	0.0	0.052	13.1	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
ArgK	PF03308.11	gi|557695000|ref|YP_008798054.1|	-	0.026	13.2	0.1	0.17	10.6	0.0	2.2	3	0	0	3	3	3	0	ArgK	protein
NACHT	PF05729.7	gi|557695000|ref|YP_008798054.1|	-	0.067	12.8	0.1	0.15	11.6	0.1	1.9	1	1	0	1	1	1	0	NACHT	domain
ArsA_ATPase	PF02374.10	gi|557695000|ref|YP_008798054.1|	-	0.09	11.7	0.0	0.15	11.0	0.0	1.5	1	1	0	1	1	1	0	Anion-transporting	ATPase
DUF258	PF03193.11	gi|557695000|ref|YP_008798054.1|	-	0.1	11.7	0.0	1.4	8.0	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|557695000|ref|YP_008798054.1|	-	0.11	12.7	0.0	0.17	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|557695000|ref|YP_008798054.1|	-	0.12	11.9	0.1	0.4	10.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|557695000|ref|YP_008798054.1|	-	0.13	12.5	0.0	0.18	12.0	0.0	1.5	1	1	0	1	1	1	0	ABC	transporter
Amidase	PF01425.16	gi|557695001|ref|YP_008798055.1|	-	4.2e-107	358.7	0.0	5.2e-107	358.4	0.0	1.0	1	0	0	1	1	1	1	Amidase
Proteasome	PF00227.21	gi|557695002|ref|YP_008798056.1|	-	3e-49	166.9	0.0	3.6e-49	166.6	0.0	1.1	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|557695002|ref|YP_008798056.1|	-	5.2e-14	51.2	0.7	1.4e-13	49.8	0.2	1.9	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
SBDS	PF01172.13	gi|557695003|ref|YP_008798057.1|	-	9.3e-23	79.8	0.0	1.3e-22	79.3	0.0	1.2	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|557695003|ref|YP_008798057.1|	-	1.8e-21	76.1	0.0	2.8e-21	75.4	0.0	1.3	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
EFG_C	PF00679.19	gi|557695003|ref|YP_008798057.1|	-	0.007	16.2	0.0	0.016	15.0	0.0	1.5	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
ECR1_N	PF14382.1	gi|557695004|ref|YP_008798058.1|	-	8.6e-10	37.7	0.0	1.7e-09	36.8	0.0	1.5	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
KH_1	PF00013.24	gi|557695004|ref|YP_008798058.1|	-	3.1e-09	36.3	0.0	7.7e-09	35.0	0.0	1.6	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|557695004|ref|YP_008798058.1|	-	8.3e-05	22.1	0.2	0.00031	20.3	0.1	2.0	2	0	0	2	2	2	1	KH	domain
S1	PF00575.18	gi|557695004|ref|YP_008798058.1|	-	0.0005	20.1	0.5	0.0012	18.9	0.3	1.7	1	1	0	1	1	1	1	S1	RNA	binding	domain
KH_2	PF07650.12	gi|557695004|ref|YP_008798058.1|	-	0.00076	18.9	0.2	0.0023	17.4	0.2	1.8	1	0	0	1	1	1	1	KH	domain
KH_4	PF13083.1	gi|557695004|ref|YP_008798058.1|	-	0.14	11.8	0.4	0.31	10.7	0.1	1.7	2	0	0	2	2	2	0	KH	domain
RNase_PH	PF01138.16	gi|557695005|ref|YP_008798059.1|	-	1.9e-33	115.5	0.0	2.6e-33	115.1	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|557695005|ref|YP_008798059.1|	-	2e-16	59.6	0.3	4e-16	58.7	0.2	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.16	gi|557695006|ref|YP_008798060.1|	-	1.3e-30	106.4	0.0	1.7e-30	106.0	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|557695006|ref|YP_008798060.1|	-	3.2e-07	30.1	0.1	6.2e-07	29.2	0.1	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
UBA_2	PF08587.6	gi|557695006|ref|YP_008798060.1|	-	0.021	14.9	0.1	0.23	11.6	0.0	2.4	1	1	1	2	2	2	0	Ubiquitin	associated	domain	(UBA)
Ribosomal_L37ae	PF01780.14	gi|557695007|ref|YP_008798061.1|	-	1.9e-21	75.7	5.2	2.1e-21	75.5	3.6	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|557695007|ref|YP_008798061.1|	-	7.5e-05	22.4	3.7	9.4e-05	22.1	2.6	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|557695007|ref|YP_008798061.1|	-	0.00018	21.0	0.7	0.00022	20.8	0.5	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Zn-ribbon_8	PF09723.5	gi|557695007|ref|YP_008798061.1|	-	0.0082	16.0	1.9	0.23	11.4	0.1	2.2	2	0	0	2	2	2	1	Zinc	ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|557695007|ref|YP_008798061.1|	-	0.013	15.1	1.4	0.34	10.6	0.1	2.2	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Rubredoxin	PF00301.15	gi|557695007|ref|YP_008798061.1|	-	0.035	13.9	1.8	0.94	9.4	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin
DZR	PF12773.2	gi|557695007|ref|YP_008798061.1|	-	0.039	13.7	0.8	0.071	12.9	0.5	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
UPF0547	PF10571.4	gi|557695007|ref|YP_008798061.1|	-	0.063	12.9	4.0	0.55	9.9	0.1	2.3	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-RanBP	PF00641.13	gi|557695007|ref|YP_008798061.1|	-	0.11	11.6	4.2	3.2	6.9	0.3	2.2	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
C1_1	PF00130.17	gi|557695007|ref|YP_008798061.1|	-	0.12	12.0	0.8	0.16	11.7	0.5	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-ribbon_3	PF13248.1	gi|557695007|ref|YP_008798061.1|	-	0.14	11.3	1.2	13	5.1	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
PHD_2	PF13831.1	gi|557695007|ref|YP_008798061.1|	-	0.19	11.0	3.6	0.74	9.1	0.4	2.2	2	0	0	2	2	2	0	PHD-finger
zf-FPG_IleRS	PF06827.9	gi|557695007|ref|YP_008798061.1|	-	0.79	9.4	0.1	0.79	9.4	0.1	2.3	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Pcc1	PF09341.5	gi|557695008|ref|YP_008798062.1|	-	4.2e-15	55.5	0.7	4.6e-15	55.4	0.5	1.0	1	0	0	1	1	1	1	Transcription	factor	Pcc1
Prefoldin_2	PF01920.15	gi|557695009|ref|YP_008798063.1|	-	6.8e-23	80.4	13.1	7.7e-23	80.2	9.1	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
DUF4140	PF13600.1	gi|557695009|ref|YP_008798063.1|	-	0.15	12.5	9.5	1.8	9.0	1.0	2.1	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF4201	PF13870.1	gi|557695009|ref|YP_008798063.1|	-	0.15	11.4	8.2	2.3	7.6	1.8	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4201)
DUF2408	PF10303.4	gi|557695009|ref|YP_008798063.1|	-	0.27	11.3	6.5	1.4	9.0	4.6	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
HALZ	PF02183.13	gi|557695009|ref|YP_008798063.1|	-	0.62	9.8	0.1	0.62	9.8	0.0	3.6	3	1	0	3	3	3	0	Homeobox	associated	leucine	zipper
FlaC_arch	PF05377.6	gi|557695009|ref|YP_008798063.1|	-	1.1	9.2	9.1	1.7	8.6	0.6	2.3	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
FUSC	PF04632.7	gi|557695009|ref|YP_008798063.1|	-	1.1	7.5	4.0	1.3	7.3	2.8	1.0	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
Shugoshin_N	PF07558.6	gi|557695009|ref|YP_008798063.1|	-	1.1	8.9	9.2	7.6	6.3	0.2	3.0	3	0	0	3	3	3	0	Shugoshin	N-terminal	coiled-coil	region
Spc7	PF08317.6	gi|557695009|ref|YP_008798063.1|	-	1.3	7.5	10.6	1.5	7.3	7.4	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
DUF972	PF06156.8	gi|557695009|ref|YP_008798063.1|	-	1.7	9.0	9.6	3.7	7.9	2.8	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Mnd1	PF03962.10	gi|557695009|ref|YP_008798063.1|	-	1.8	8.1	9.9	6.4	6.3	1.5	2.1	1	1	0	1	1	1	0	Mnd1	family
DUF2968	PF11180.3	gi|557695009|ref|YP_008798063.1|	-	2.5	7.4	12.3	0.95	8.8	2.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2968)
DUF342	PF03961.8	gi|557695009|ref|YP_008798063.1|	-	2.7	6.2	7.5	5.1	5.4	5.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
YlqD	PF11068.3	gi|557695009|ref|YP_008798063.1|	-	3.3	7.7	15.5	0.24	11.4	3.2	2.1	1	1	1	2	2	2	0	YlqD	protein
Leucyl-specific	PF14795.1	gi|557695009|ref|YP_008798063.1|	-	4.3	7.2	6.6	2.2	8.2	0.3	2.9	2	2	0	2	2	2	0	Leucine-tRNA	synthetase-specific	domain
NTR2	PF15458.1	gi|557695009|ref|YP_008798063.1|	-	5	6.2	14.1	2.6	7.2	2.3	2.1	2	0	0	2	2	2	0	Nineteen	complex-related	protein	2
Spc24	PF08286.6	gi|557695009|ref|YP_008798063.1|	-	5.3	6.7	9.5	3.2	7.4	2.0	2.2	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
Prefoldin	PF02996.12	gi|557695009|ref|YP_008798063.1|	-	6.6	6.4	11.1	9.6	5.8	2.0	2.3	1	1	1	2	2	2	0	Prefoldin	subunit
DHH	PF01368.15	gi|557695010|ref|YP_008798064.1|	-	5.5e-12	45.5	0.1	9.4e-12	44.7	0.0	1.3	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|557695010|ref|YP_008798064.1|	-	2.7e-05	23.8	1.3	5.6e-05	22.7	0.5	1.8	2	0	0	2	2	2	1	DHHA1	domain
ABC_tran	PF00005.22	gi|557695011|ref|YP_008798065.1|	-	5.8e-29	101.1	0.0	8.3e-29	100.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557695011|ref|YP_008798065.1|	-	6e-12	46.1	0.0	9.5e-07	29.0	0.1	2.1	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557695011|ref|YP_008798065.1|	-	5.1e-07	29.1	0.2	2.9e-06	26.6	0.1	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|557695011|ref|YP_008798065.1|	-	0.00067	19.1	0.1	0.0014	18.1	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|557695011|ref|YP_008798065.1|	-	0.00093	19.2	0.7	0.0015	18.5	0.4	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|557695011|ref|YP_008798065.1|	-	0.0013	17.9	0.0	0.0027	16.9	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_10	PF12846.2	gi|557695011|ref|YP_008798065.1|	-	0.0016	17.9	0.2	0.058	12.8	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
AAA_25	PF13481.1	gi|557695011|ref|YP_008798065.1|	-	0.0034	16.8	0.1	0.042	13.2	0.0	2.4	3	0	0	3	3	3	1	AAA	domain
Mg_chelatase	PF01078.16	gi|557695011|ref|YP_008798065.1|	-	0.0039	16.3	0.0	0.0067	15.6	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_22	PF13401.1	gi|557695011|ref|YP_008798065.1|	-	0.0085	16.2	0.1	0.025	14.6	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|557695011|ref|YP_008798065.1|	-	0.012	15.9	0.0	0.02	15.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_15	PF13175.1	gi|557695011|ref|YP_008798065.1|	-	0.02	13.9	0.0	3.6	6.5	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_28	PF13521.1	gi|557695011|ref|YP_008798065.1|	-	0.027	14.4	0.0	0.23	11.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|557695011|ref|YP_008798065.1|	-	0.04	14.1	0.8	11	6.2	0.0	2.5	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|557695011|ref|YP_008798065.1|	-	0.07	13.9	1.2	0.39	11.5	0.3	2.5	2	2	1	3	3	3	0	AAA	domain
AAA_33	PF13671.1	gi|557695011|ref|YP_008798065.1|	-	0.079	12.8	0.0	0.16	11.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|557695011|ref|YP_008798065.1|	-	0.084	12.8	0.4	0.69	9.8	0.3	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
MobB	PF03205.9	gi|557695011|ref|YP_008798065.1|	-	0.089	12.5	0.0	0.16	11.6	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
IstB_IS21	PF01695.12	gi|557695011|ref|YP_008798065.1|	-	0.1	12.0	0.3	0.72	9.2	0.0	2.3	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
NACHT	PF05729.7	gi|557695011|ref|YP_008798065.1|	-	0.11	12.0	0.1	0.35	10.5	0.0	1.8	2	0	0	2	2	2	0	NACHT	domain
AAA_30	PF13604.1	gi|557695011|ref|YP_008798065.1|	-	0.13	11.8	0.0	0.26	10.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|557695011|ref|YP_008798065.1|	-	0.14	11.8	0.1	1.5	8.5	0.0	2.2	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.1	gi|557695011|ref|YP_008798065.1|	-	0.16	12.2	0.2	0.72	10.1	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|557695012|ref|YP_008798066.1|	-	2.8e-27	95.6	0.0	4.8e-27	94.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557695012|ref|YP_008798066.1|	-	6.4e-12	46.0	0.0	7e-06	26.2	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557695012|ref|YP_008798066.1|	-	2.8e-06	26.7	0.1	7e-05	22.1	0.0	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|557695012|ref|YP_008798066.1|	-	5e-06	26.9	0.0	8e-06	26.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|557695012|ref|YP_008798066.1|	-	1.9e-05	23.9	0.0	0.014	14.4	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|557695012|ref|YP_008798066.1|	-	0.00011	21.6	0.0	0.00029	20.3	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|557695012|ref|YP_008798066.1|	-	0.00084	19.0	0.1	0.0019	17.9	0.1	1.6	1	0	0	1	1	1	1	NACHT	domain
SRP54	PF00448.17	gi|557695012|ref|YP_008798066.1|	-	0.0019	17.6	0.1	0.0047	16.4	0.0	1.7	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.10	gi|557695012|ref|YP_008798066.1|	-	0.0024	17.5	0.8	0.079	12.6	0.1	2.2	2	0	0	2	2	2	1	NTPase
AAA_19	PF13245.1	gi|557695012|ref|YP_008798066.1|	-	0.0041	16.8	0.0	0.1	12.3	0.0	2.3	2	0	0	2	2	2	1	Part	of	AAA	domain
UPF0079	PF02367.12	gi|557695012|ref|YP_008798066.1|	-	0.0041	16.7	0.1	0.0098	15.5	0.1	1.6	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_16	PF13191.1	gi|557695012|ref|YP_008798066.1|	-	0.0047	16.9	0.1	0.0092	15.9	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_30	PF13604.1	gi|557695012|ref|YP_008798066.1|	-	0.0086	15.6	0.0	0.023	14.2	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|557695012|ref|YP_008798066.1|	-	0.011	15.7	0.0	0.028	14.4	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|557695012|ref|YP_008798066.1|	-	0.011	14.8	0.0	0.023	13.8	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_22	PF13401.1	gi|557695012|ref|YP_008798066.1|	-	0.012	15.7	0.0	0.029	14.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|557695012|ref|YP_008798066.1|	-	0.012	15.2	0.1	0.024	14.3	0.0	1.6	1	1	0	1	1	1	0	Archaeal	ATPase
DLIC	PF05783.6	gi|557695012|ref|YP_008798066.1|	-	0.017	13.8	0.1	0.026	13.2	0.0	1.2	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
Gag_p17	PF00540.13	gi|557695012|ref|YP_008798066.1|	-	0.021	14.5	0.0	0.05	13.3	0.0	1.6	1	0	0	1	1	1	0	gag	gene	protein	p17	(matrix	protein)
cobW	PF02492.14	gi|557695012|ref|YP_008798066.1|	-	0.022	14.1	0.2	0.045	13.1	0.1	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_25	PF13481.1	gi|557695012|ref|YP_008798066.1|	-	0.043	13.2	0.1	0.1	11.9	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.4	gi|557695012|ref|YP_008798066.1|	-	0.046	13.2	0.1	0.11	11.9	0.1	1.6	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
DUF3584	PF12128.3	gi|557695012|ref|YP_008798066.1|	-	0.052	10.8	0.1	0.069	10.4	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_5	PF07728.9	gi|557695012|ref|YP_008798066.1|	-	0.069	12.8	0.1	0.25	11.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
NB-ARC	PF00931.17	gi|557695012|ref|YP_008798066.1|	-	0.083	11.7	0.0	0.16	10.8	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
Miro	PF08477.8	gi|557695012|ref|YP_008798066.1|	-	0.086	13.3	0.1	0.43	11.0	0.0	2.0	2	0	0	2	2	2	0	Miro-like	protein
AAA_10	PF12846.2	gi|557695012|ref|YP_008798066.1|	-	0.096	12.1	0.1	0.17	11.2	0.0	1.4	1	1	0	1	1	1	0	AAA-like	domain
MobB	PF03205.9	gi|557695012|ref|YP_008798066.1|	-	0.1	12.3	0.8	0.18	11.4	0.1	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_18	PF13238.1	gi|557695012|ref|YP_008798066.1|	-	0.11	12.7	0.0	0.3	11.4	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|557695012|ref|YP_008798066.1|	-	0.11	11.6	0.1	0.21	10.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_28	PF13521.1	gi|557695012|ref|YP_008798066.1|	-	0.17	11.8	0.3	0.62	10.0	0.2	2.0	1	1	0	1	1	1	0	AAA	domain
CbiQ	PF02361.11	gi|557695013|ref|YP_008798067.1|	-	8.7e-37	126.8	11.3	8.7e-37	126.8	7.9	1.8	2	0	0	2	2	2	1	Cobalt	transport	protein
TBP	PF00352.16	gi|557695014|ref|YP_008798068.1|	-	3.6e-65	215.3	0.1	1.4e-32	110.8	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|557695014|ref|YP_008798068.1|	-	7.2e-07	29.1	0.1	0.039	14.0	0.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
BPL_LplA_LipB	PF03099.14	gi|557695015|ref|YP_008798069.1|	-	5.4e-17	61.9	0.1	7.8e-17	61.4	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Pyr_redox_2	PF07992.9	gi|557695016|ref|YP_008798070.1|	-	3.5e-38	131.5	0.0	6.1e-38	130.7	0.0	1.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|557695016|ref|YP_008798070.1|	-	2.2e-32	111.3	0.7	6.4e-32	109.8	0.5	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|557695016|ref|YP_008798070.1|	-	7.2e-23	80.7	8.8	9.5e-21	74.0	0.4	3.7	4	1	0	4	4	4	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|557695016|ref|YP_008798070.1|	-	1.3e-11	44.9	2.8	3e-10	40.4	0.8	2.2	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|557695016|ref|YP_008798070.1|	-	2.3e-09	36.6	7.4	4e-09	35.8	2.1	2.6	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|557695016|ref|YP_008798070.1|	-	3.3e-08	32.8	17.7	2.3e-06	26.7	0.4	4.1	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|557695016|ref|YP_008798070.1|	-	3.1e-07	29.6	7.9	1.6e-05	23.9	0.3	3.8	4	0	0	4	4	4	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|557695016|ref|YP_008798070.1|	-	6.4e-07	28.7	2.3	6.4e-07	28.7	1.6	1.6	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|557695016|ref|YP_008798070.1|	-	1.2e-06	28.4	3.2	0.00014	21.7	0.1	2.7	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|557695016|ref|YP_008798070.1|	-	5.9e-06	25.5	5.8	0.00014	21.0	0.1	2.6	2	1	0	2	2	2	2	FAD	binding	domain
HI0933_like	PF03486.9	gi|557695016|ref|YP_008798070.1|	-	0.00055	18.5	8.2	0.02	13.3	0.1	3.9	4	0	0	4	4	4	1	HI0933-like	protein
NAD_binding_7	PF13241.1	gi|557695016|ref|YP_008798070.1|	-	0.00079	19.6	0.8	0.25	11.6	0.1	2.8	2	1	0	2	2	2	1	Putative	NAD(P)-binding
Thi4	PF01946.12	gi|557695016|ref|YP_008798070.1|	-	0.005	15.9	0.3	0.005	15.9	0.2	2.6	3	1	0	3	3	3	1	Thi4	family
XdhC_C	PF13478.1	gi|557695016|ref|YP_008798070.1|	-	0.038	14.2	0.1	2.5	8.4	0.0	2.6	2	0	0	2	2	2	0	XdhC	Rossmann	domain
Lycopene_cycl	PF05834.7	gi|557695016|ref|YP_008798070.1|	-	0.041	12.7	2.7	0.14	11.0	0.2	2.5	2	1	0	2	2	2	0	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|557695016|ref|YP_008798070.1|	-	0.05	13.3	4.5	0.98	9.1	0.0	3.2	3	0	0	3	3	3	0	FAD-NAD(P)-binding
Trp_halogenase	PF04820.9	gi|557695016|ref|YP_008798070.1|	-	0.06	11.9	0.1	0.06	11.9	0.1	2.0	3	0	0	3	3	3	0	Tryptophan	halogenase
Transket_pyr	PF02779.19	gi|557695017|ref|YP_008798071.1|	-	7.5e-51	172.1	0.0	1e-50	171.7	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|557695017|ref|YP_008798071.1|	-	2.5e-38	130.7	0.2	1.2e-37	128.5	0.0	1.9	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
CPSase_L_D2	PF02786.12	gi|557695017|ref|YP_008798071.1|	-	0.16	11.2	0.1	10	5.3	0.0	2.1	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Radical_SAM	PF04055.16	gi|557695018|ref|YP_008798072.1|	-	5.1e-11	43.0	0.0	7.2e-11	42.5	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
DUF473	PF04322.7	gi|557695018|ref|YP_008798072.1|	-	0.14	11.7	0.0	0.25	11.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF473)
NUDIX	PF00293.23	gi|557695019|ref|YP_008798073.1|	-	1.6e-21	76.3	0.5	2e-21	76.0	0.3	1.1	1	0	0	1	1	1	1	NUDIX	domain
CarboxypepD_reg	PF13620.1	gi|557695020|ref|YP_008798074.1|	-	8.4e-18	64.2	21.3	6.1e-09	35.8	0.7	5.8	5	1	0	5	5	5	4	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.11	gi|557695020|ref|YP_008798074.1|	-	6.9e-09	35.5	21.4	0.0017	18.2	1.1	5.5	5	1	1	6	6	6	3	Bacterial	Ig-like	domain	(group	1)
DUF4198	PF10670.4	gi|557695020|ref|YP_008798074.1|	-	0.014	15.4	1.6	0.98	9.3	0.0	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4198)
Cna_B	PF05738.8	gi|557695020|ref|YP_008798074.1|	-	0.024	14.3	0.3	0.12	12.1	0.0	2.3	2	0	0	2	2	2	0	Cna	protein	B-type	domain
PKD	PF00801.15	gi|557695020|ref|YP_008798074.1|	-	0.13	12.0	5.0	0.075	12.7	0.4	2.7	3	1	0	3	3	3	0	PKD	domain
Dioxygenase_C	PF00775.16	gi|557695020|ref|YP_008798074.1|	-	0.17	11.1	0.2	35	3.5	0.0	3.6	4	1	0	4	4	4	0	Dioxygenase
F420_ligase	PF01996.11	gi|557695022|ref|YP_008798076.1|	-	8.4e-72	240.9	0.8	9.7e-72	240.7	0.6	1.0	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
Mrr_cat	PF04471.7	gi|557695023|ref|YP_008798077.1|	-	0.00026	20.7	0.0	0.00043	20.0	0.0	1.3	1	0	0	1	1	1	1	Restriction	endonuclease
NERD	PF08378.6	gi|557695023|ref|YP_008798077.1|	-	0.0018	18.5	0.0	0.0031	17.7	0.0	1.5	1	1	0	1	1	1	1	Nuclease-related	domain
HIT	PF01230.18	gi|557695024|ref|YP_008798078.1|	-	2.1e-12	47.3	0.0	2.9e-12	46.9	0.0	1.1	1	0	0	1	1	1	1	HIT	domain
CwfJ_C_1	PF04677.10	gi|557695024|ref|YP_008798078.1|	-	1.1e-07	31.4	0.0	1.9e-07	30.7	0.0	1.3	1	0	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
DcpS_C	PF11969.3	gi|557695024|ref|YP_008798078.1|	-	6.1e-07	29.6	0.0	8.6e-07	29.1	0.0	1.2	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
Radical_SAM	PF04055.16	gi|557695025|ref|YP_008798079.1|	-	1.1e-20	74.4	0.1	6.9e-19	68.6	0.0	2.6	2	1	0	2	2	2	1	Radical	SAM	superfamily
Wyosine_form	PF08608.7	gi|557695025|ref|YP_008798079.1|	-	8.3e-18	64.2	0.0	2.8e-17	62.5	0.0	1.9	2	0	0	2	2	2	1	Wyosine	base	formation
Fer4_12	PF13353.1	gi|557695025|ref|YP_008798079.1|	-	8.9e-05	22.6	0.1	0.095	12.8	0.0	2.3	1	1	1	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|557695025|ref|YP_008798079.1|	-	0.00077	19.4	0.1	0.039	13.9	0.1	2.3	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
HAD_2	PF13419.1	gi|557695025|ref|YP_008798079.1|	-	0.00082	19.6	0.0	0.0013	18.9	0.0	1.3	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
PfkB	PF00294.19	gi|557695026|ref|YP_008798080.1|	-	2.7e-13	49.7	0.1	6.4e-07	28.7	0.0	2.1	2	0	0	2	2	2	2	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|557695026|ref|YP_008798080.1|	-	0.051	12.8	0.0	0.09	12.0	0.0	1.4	1	0	0	1	1	1	0	Carbohydrate	kinase
Virulence_fact	PF13769.1	gi|557695027|ref|YP_008798081.1|	-	0.099	12.5	0.1	0.15	11.9	0.1	1.4	1	1	0	1	1	1	0	Virulence	factor
AdoMet_dc	PF02675.10	gi|557695028|ref|YP_008798082.1|	-	2e-33	114.4	0.0	2.5e-33	114.1	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
MoaE	PF02391.12	gi|557695029|ref|YP_008798083.1|	-	2.4e-21	75.7	0.1	2.9e-21	75.4	0.0	1.1	1	0	0	1	1	1	1	MoaE	protein
ThiS	PF02597.15	gi|557695030|ref|YP_008798084.1|	-	5.1e-20	71.6	0.0	6e-20	71.4	0.0	1.1	1	0	0	1	1	1	1	ThiS	family
Lambda_tail_I	PF06805.7	gi|557695030|ref|YP_008798084.1|	-	0.0051	16.6	0.0	0.0064	16.2	0.0	1.4	1	1	0	1	1	1	1	Bacteriophage	lambda	tail	assembly	protein	I
DUF2635	PF10948.3	gi|557695030|ref|YP_008798084.1|	-	0.0067	15.6	0.0	0.0099	15.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2635)
TGS	PF02824.16	gi|557695030|ref|YP_008798084.1|	-	0.013	15.2	0.0	4.3	7.2	0.0	2.2	2	0	0	2	2	2	0	TGS	domain
dUTPase	PF00692.14	gi|557695031|ref|YP_008798085.1|	-	9.4e-19	67.1	0.0	1.3e-18	66.7	0.0	1.2	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.6	gi|557695031|ref|YP_008798085.1|	-	0.0015	17.0	0.0	0.0028	16.1	0.0	1.5	1	1	0	1	1	1	1	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
DUF3821	PF12863.2	gi|557695031|ref|YP_008798085.1|	-	0.087	12.4	0.0	0.13	11.9	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3821)
Lactamase_B_2	PF12706.2	gi|557695032|ref|YP_008798086.1|	-	4.5e-26	91.5	0.3	5.6e-26	91.2	0.2	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|557695032|ref|YP_008798086.1|	-	4.6e-16	59.0	0.1	1.9e-15	57.0	0.1	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|557695032|ref|YP_008798086.1|	-	1.1e-07	31.6	0.0	1.9e-07	30.9	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
MoCF_biosynth	PF00994.19	gi|557695033|ref|YP_008798087.1|	-	8.4e-32	109.5	0.0	9.7e-32	109.3	0.0	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
HAD	PF12710.2	gi|557695033|ref|YP_008798087.1|	-	0.023	14.8	0.0	1.2	9.2	0.0	2.1	1	1	1	2	2	2	0	haloacid	dehalogenase-like	hydrolase
MoaC	PF01967.16	gi|557695034|ref|YP_008798088.1|	-	1e-42	145.0	1.9	1.1e-42	144.8	1.3	1.0	1	0	0	1	1	1	1	MoaC	family
Ribosomal_S11	PF00411.14	gi|557695035|ref|YP_008798089.1|	-	1.2e-34	118.8	0.3	1.5e-34	118.4	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S11
S4	PF01479.20	gi|557695036|ref|YP_008798090.1|	-	2.4e-17	62.0	0.1	4.9e-17	61.1	0.1	1.5	1	0	0	1	1	1	1	S4	domain
Ribosomal_S4	PF00163.14	gi|557695036|ref|YP_008798090.1|	-	2.9e-06	27.5	4.3	3.1e-06	27.4	1.6	2.0	2	1	0	2	2	2	1	Ribosomal	protein	S4/S9	N-terminal	domain
IL4	PF00727.13	gi|557695036|ref|YP_008798090.1|	-	0.15	11.9	0.1	0.24	11.2	0.0	1.3	1	0	0	1	1	1	0	Interleukin	4
DAO	PF01266.19	gi|557695037|ref|YP_008798091.1|	-	3e-14	52.6	0.7	2.4e-07	29.9	0.1	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|557695037|ref|YP_008798091.1|	-	4.5e-14	52.2	1.6	5.4e-05	22.4	0.1	3.1	3	0	0	3	3	3	3	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|557695037|ref|YP_008798091.1|	-	6.7e-10	39.1	0.2	1.4e-09	38.1	0.1	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|557695037|ref|YP_008798091.1|	-	4.1e-09	35.8	0.1	2.4e-06	26.7	0.0	2.2	2	0	0	2	2	2	2	Lycopene	cyclase	protein
HI0933_like	PF03486.9	gi|557695037|ref|YP_008798091.1|	-	1.4e-08	33.6	1.5	7.7e-06	24.6	0.2	2.3	2	0	0	2	2	2	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|557695037|ref|YP_008798091.1|	-	2.5e-08	33.4	4.2	5.6e-08	32.2	1.5	2.3	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|557695037|ref|YP_008798091.1|	-	5.8e-07	28.5	0.1	0.018	13.6	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
Thi4	PF01946.12	gi|557695037|ref|YP_008798091.1|	-	2e-06	27.1	0.2	7.3e-05	21.9	0.0	2.5	2	0	0	2	2	2	1	Thi4	family
GIDA	PF01134.17	gi|557695037|ref|YP_008798091.1|	-	4.9e-06	25.6	3.3	1.2e-05	24.3	2.3	1.8	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.19	gi|557695037|ref|YP_008798091.1|	-	0.0001	21.2	0.7	0.0001	21.2	0.5	2.0	3	0	0	3	3	3	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|557695037|ref|YP_008798091.1|	-	0.00017	21.5	0.0	0.00017	21.5	0.0	2.3	3	0	0	3	3	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|557695037|ref|YP_008798091.1|	-	0.00042	20.4	0.9	0.012	15.6	0.8	2.6	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|557695037|ref|YP_008798091.1|	-	0.00088	19.6	0.6	0.0064	16.8	0.1	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|557695037|ref|YP_008798091.1|	-	0.0036	17.0	0.2	0.72	9.6	0.0	2.5	2	0	0	2	2	2	1	FAD-NAD(P)-binding
DUF896	PF05979.7	gi|557695037|ref|YP_008798091.1|	-	0.089	12.3	0.0	0.39	10.3	0.0	1.9	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF896)
Peptidase_M20	PF01546.23	gi|557695038|ref|YP_008798092.1|	-	5.6e-26	91.2	0.0	9.5e-26	90.4	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|557695038|ref|YP_008798092.1|	-	3.4e-20	71.8	0.0	5.6e-20	71.1	0.0	1.3	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Isochorismatase	PF00857.15	gi|557695039|ref|YP_008798093.1|	-	6.4e-41	140.1	0.0	7.2e-41	140.0	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
QRPTase_C	PF01729.14	gi|557695040|ref|YP_008798094.1|	-	3.2e-21	75.6	0.0	5.4e-21	74.8	0.0	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|557695040|ref|YP_008798094.1|	-	0.00012	21.8	0.0	0.00093	18.9	0.0	2.4	3	0	0	3	3	3	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
BtpA	PF03437.10	gi|557695040|ref|YP_008798094.1|	-	0.081	12.1	0.0	0.3	10.3	0.0	1.8	2	0	0	2	2	2	0	BtpA	family
Lyase_1	PF00206.15	gi|557695041|ref|YP_008798095.1|	-	1.1e-106	356.5	0.0	1.5e-106	356.1	0.0	1.1	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.4	gi|557695041|ref|YP_008798095.1|	-	5.2e-16	58.4	1.3	4.3e-15	55.5	0.4	2.5	2	0	0	2	2	2	1	Fumarase	C	C-terminus
Fe-ADH_2	PF13685.1	gi|557695042|ref|YP_008798096.1|	-	1.3e-58	198.2	0.1	1.7e-58	197.8	0.1	1.2	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|557695042|ref|YP_008798096.1|	-	2.6e-17	62.5	0.6	7.2e-17	61.0	0.4	1.7	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|557695042|ref|YP_008798096.1|	-	1.6e-07	30.5	0.2	2.2e-06	26.7	0.1	2.3	1	1	0	1	1	1	1	3-dehydroquinate	synthase
AIRC	PF00731.15	gi|557695042|ref|YP_008798096.1|	-	0.11	11.8	0.1	0.3	10.3	0.1	1.7	1	1	0	1	1	1	0	AIR	carboxylase
Aldolase_2	PF10120.4	gi|557695043|ref|YP_008798097.1|	-	1.1e-33	115.9	0.1	2.4e-33	114.9	0.0	1.5	2	0	0	2	2	2	1	Putative	aldolase
Cro	PF09048.5	gi|557695043|ref|YP_008798097.1|	-	0.0012	18.4	0.0	0.0026	17.3	0.0	1.5	1	0	0	1	1	1	1	Cro
HTH_37	PF13744.1	gi|557695043|ref|YP_008798097.1|	-	0.0016	18.2	0.0	0.0033	17.1	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|557695043|ref|YP_008798097.1|	-	0.0031	17.3	0.4	0.026	14.3	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix
HTH_1	PF00126.22	gi|557695043|ref|YP_008798097.1|	-	0.0092	15.7	0.1	0.033	13.9	0.0	2.0	2	0	0	2	2	2	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
P22_Cro	PF14549.1	gi|557695043|ref|YP_008798097.1|	-	0.015	15.0	0.1	0.061	13.0	0.1	2.0	2	0	0	2	2	2	0	DNA-binding	transcriptional	regulator	Cro
MarR_2	PF12802.2	gi|557695043|ref|YP_008798097.1|	-	0.02	14.5	0.0	0.19	11.4	0.0	2.3	2	0	0	2	2	2	0	MarR	family
Sigma70_r4	PF04545.11	gi|557695043|ref|YP_008798097.1|	-	0.024	13.9	0.0	0.083	12.2	0.0	1.9	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_23	PF13384.1	gi|557695043|ref|YP_008798097.1|	-	0.039	13.6	0.1	0.16	11.6	0.0	2.1	2	1	0	2	2	2	0	Homeodomain-like	domain
HTH_3	PF01381.17	gi|557695044|ref|YP_008798098.1|	-	4.9e-09	35.8	0.1	5.3e-08	32.5	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix
HTH_23	PF13384.1	gi|557695044|ref|YP_008798098.1|	-	1.6e-05	24.4	0.2	0.00032	20.2	0.0	2.2	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_37	PF13744.1	gi|557695044|ref|YP_008798098.1|	-	2.8e-05	23.8	0.2	9.1e-05	22.1	0.0	1.9	2	1	1	3	3	3	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|557695044|ref|YP_008798098.1|	-	5.2e-05	23.3	0.1	0.0001	22.4	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|557695044|ref|YP_008798098.1|	-	7.9e-05	21.8	0.8	0.00046	19.4	0.1	2.1	2	0	0	2	2	2	1	Sigma-70,	region	4
Cro	PF09048.5	gi|557695044|ref|YP_008798098.1|	-	0.0003	20.3	0.0	0.00054	19.5	0.0	1.5	1	0	0	1	1	1	1	Cro
HTH_19	PF12844.2	gi|557695044|ref|YP_008798098.1|	-	0.00038	20.4	0.1	0.00079	19.4	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|557695044|ref|YP_008798098.1|	-	0.00067	19.1	0.0	0.019	14.5	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|557695044|ref|YP_008798098.1|	-	0.0015	17.9	0.1	0.052	13.0	0.0	2.2	2	0	0	2	2	2	1	Sigma-70,	region	4
P22_Cro	PF14549.1	gi|557695044|ref|YP_008798098.1|	-	0.0065	16.1	0.2	0.033	13.9	0.0	2.0	2	0	0	2	2	2	1	DNA-binding	transcriptional	regulator	Cro
HTH_Crp_2	PF13545.1	gi|557695044|ref|YP_008798098.1|	-	0.01	15.5	0.0	0.11	12.2	0.0	2.1	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_28	PF13518.1	gi|557695044|ref|YP_008798098.1|	-	0.016	15.2	0.5	3.3	7.8	0.1	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
RepB	PF07506.6	gi|557695044|ref|YP_008798098.1|	-	0.049	13.4	0.0	0.073	12.9	0.0	1.3	1	1	0	1	1	1	0	RepB	plasmid	partitioning	protein
HTH_1	PF00126.22	gi|557695044|ref|YP_008798098.1|	-	0.055	13.2	0.0	0.097	12.4	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
DUF134	PF02001.11	gi|557695044|ref|YP_008798098.1|	-	0.076	12.9	0.2	0.15	11.9	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF134
HTH_22	PF13309.1	gi|557695044|ref|YP_008798098.1|	-	0.08	12.7	0.1	0.23	11.2	0.1	1.8	1	0	0	1	1	1	0	HTH	domain
HTH_10	PF04967.7	gi|557695044|ref|YP_008798098.1|	-	0.083	12.4	0.0	0.19	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	DNA	binding	domain
LacI	PF00356.16	gi|557695044|ref|YP_008798098.1|	-	0.19	11.3	1.2	0.5	10.0	0.1	2.2	2	1	0	2	2	2	0	Bacterial	regulatory	proteins,	lacI	family
tRNA_deacylase	PF04414.7	gi|557695045|ref|YP_008798099.1|	-	1.3e-50	171.4	0.0	1.6e-50	171.1	0.0	1.1	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
Methyltransf_26	PF13659.1	gi|557695046|ref|YP_008798100.1|	-	7.4e-11	42.1	0.0	1.2e-10	41.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Spermine_synth	PF01564.12	gi|557695046|ref|YP_008798100.1|	-	1.5e-07	30.6	0.0	2.9e-07	29.6	0.0	1.5	1	1	1	2	2	2	1	Spermine/spermidine	synthase
Methyltransf_18	PF12847.2	gi|557695046|ref|YP_008798100.1|	-	1.8e-07	31.6	0.0	3.1e-07	30.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|557695046|ref|YP_008798100.1|	-	2.1e-07	30.5	0.0	3.1e-07	29.9	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_30	PF05430.6	gi|557695046|ref|YP_008798100.1|	-	8.6e-06	25.4	0.0	1.5e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_31	PF13847.1	gi|557695046|ref|YP_008798100.1|	-	9e-05	22.0	0.0	0.00013	21.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|557695046|ref|YP_008798100.1|	-	0.00035	20.0	0.0	0.0005	19.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_24	PF13578.1	gi|557695046|ref|YP_008798100.1|	-	0.002	18.9	0.0	0.0043	17.8	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|557695046|ref|YP_008798100.1|	-	0.004	16.7	0.0	0.0055	16.3	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
PrmA	PF06325.8	gi|557695046|ref|YP_008798100.1|	-	0.0059	15.7	0.0	0.0089	15.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltrans_SAM	PF10672.4	gi|557695046|ref|YP_008798100.1|	-	0.0076	15.1	0.0	0.015	14.1	0.0	1.5	1	1	0	1	1	1	1	S-adenosylmethionine-dependent	methyltransferase
Ubie_methyltran	PF01209.13	gi|557695046|ref|YP_008798100.1|	-	0.015	14.4	0.0	0.12	11.4	0.0	2.3	2	1	1	3	3	3	0	ubiE/COQ5	methyltransferase	family
APH_6_hur	PF04655.9	gi|557695046|ref|YP_008798100.1|	-	0.019	14.1	0.0	0.03	13.4	0.0	1.2	1	0	0	1	1	1	0	Aminoglycoside/hydroxyurea	antibiotic	resistance	kinase
Methyltransf_11	PF08241.7	gi|557695046|ref|YP_008798100.1|	-	0.03	14.8	0.0	0.077	13.5	0.0	1.7	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|557695046|ref|YP_008798100.1|	-	0.036	14.4	0.0	0.06	13.7	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
PCMT	PF01135.14	gi|557695046|ref|YP_008798100.1|	-	0.041	13.4	0.0	0.07	12.6	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF43	PF01861.11	gi|557695046|ref|YP_008798100.1|	-	0.063	12.2	0.0	0.094	11.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF43
tRNA-synt_1f	PF01921.13	gi|557695047|ref|YP_008798101.1|	-	3.4e-100	335.2	0.0	4.6e-100	334.7	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
tRNA_anti-codon	PF01336.20	gi|557695048|ref|YP_008798102.1|	-	1.1e-06	28.3	0.1	1.6e-06	27.8	0.0	1.3	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
NfeD	PF01957.13	gi|557695049|ref|YP_008798103.1|	-	9.1e-23	80.9	1.2	9.1e-23	80.9	0.8	2.8	3	1	1	4	4	4	1	NfeD-like	C-terminal,	partner-binding
CLP_protease	PF00574.18	gi|557695049|ref|YP_008798103.1|	-	1.2e-06	28.3	0.1	1.9e-06	27.6	0.1	1.3	1	0	0	1	1	1	1	Clp	protease
ECH	PF00378.15	gi|557695049|ref|YP_008798103.1|	-	0.0013	17.9	0.3	0.0049	16.0	0.2	1.7	1	1	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
TMEMspv1-c74-12	PF11044.3	gi|557695049|ref|YP_008798103.1|	-	1.5	8.4	3.6	2.4	7.7	0.0	2.4	2	0	0	2	2	2	0	Plectrovirus	spv1-c74	ORF	12	transmembrane	protein
Band_7	PF01145.20	gi|557695050|ref|YP_008798104.1|	-	1.6e-33	116.1	5.1	2e-33	115.8	3.5	1.1	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|557695050|ref|YP_008798104.1|	-	2.9e-05	23.7	0.1	9.1e-05	22.0	0.1	1.8	2	0	0	2	2	2	1	SPFH	domain-Band	7	family
Atg14	PF10186.4	gi|557695050|ref|YP_008798104.1|	-	0.09	11.7	0.6	0.12	11.2	0.4	1.2	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF4607	PF15380.1	gi|557695050|ref|YP_008798104.1|	-	0.15	11.5	0.1	0.21	11.0	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4607)
AAA_13	PF13166.1	gi|557695051|ref|YP_008798105.1|	-	0.0039	15.7	14.4	0.0039	15.7	10.0	2.8	1	1	2	3	3	3	1	AAA	domain
Reo_sigmaC	PF04582.7	gi|557695051|ref|YP_008798105.1|	-	0.0072	15.5	5.9	0.044	12.9	0.1	2.5	1	1	1	2	2	2	1	Reovirus	sigma	C	capsid	protein
UreF	PF01730.11	gi|557695051|ref|YP_008798105.1|	-	0.043	13.9	0.7	0.15	12.1	0.3	2.1	2	0	0	2	2	1	0	UreF
Rpr2	PF04032.11	gi|557695051|ref|YP_008798105.1|	-	0.06	13.2	0.4	0.06	13.2	0.3	2.7	3	1	0	3	3	3	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DUF948	PF06103.6	gi|557695051|ref|YP_008798105.1|	-	0.077	12.8	18.7	0.21	11.4	0.2	5.8	3	2	2	5	5	5	0	Bacterial	protein	of	unknown	function	(DUF948)
RabGAP-TBC	PF00566.13	gi|557695051|ref|YP_008798105.1|	-	0.078	12.4	0.3	0.19	11.1	0.2	1.7	1	0	0	1	1	1	0	Rab-GTPase-TBC	domain
WXG100	PF06013.7	gi|557695051|ref|YP_008798105.1|	-	0.12	12.4	7.5	4.7	7.2	0.0	4.6	3	2	0	3	3	3	0	Proteins	of	100	residues	with	WXG
Spc7	PF08317.6	gi|557695051|ref|YP_008798105.1|	-	0.13	10.9	44.0	0.26	9.8	9.9	4.1	1	1	3	4	4	4	0	Spc7	kinetochore	protein
HGD-D	PF06050.8	gi|557695051|ref|YP_008798105.1|	-	0.41	9.4	5.2	0.35	9.6	2.4	1.8	1	1	0	1	1	1	0	2-hydroxyglutaryl-CoA	dehydratase,	D-component
IncA	PF04156.9	gi|557695051|ref|YP_008798105.1|	-	0.59	9.7	54.2	0.043	13.3	15.8	4.2	3	1	1	4	4	4	0	IncA	protein
Med11	PF10280.4	gi|557695051|ref|YP_008798105.1|	-	0.71	9.9	12.5	7.5	6.6	8.7	2.9	1	1	0	1	1	1	0	Mediator	complex	protein
Flagellin_C	PF00700.16	gi|557695051|ref|YP_008798105.1|	-	0.85	9.8	4.2	3.9	7.6	0.1	3.6	3	0	0	3	3	3	0	Bacterial	flagellin	C-terminal	helical	region
MCPsignal	PF00015.16	gi|557695051|ref|YP_008798105.1|	-	1.2	8.6	10.2	0.45	10.0	3.2	2.7	1	1	2	3	3	3	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
NPV_P10	PF05531.7	gi|557695051|ref|YP_008798105.1|	-	1.6	8.9	17.0	4.7	7.5	0.3	5.4	3	2	3	6	6	6	0	Nucleopolyhedrovirus	P10	protein
DUF1664	PF07889.7	gi|557695051|ref|YP_008798105.1|	-	1.8	8.3	20.9	5.2	6.8	2.9	4.5	3	1	2	5	5	5	0	Protein	of	unknown	function	(DUF1664)
PilJ	PF13675.1	gi|557695051|ref|YP_008798105.1|	-	2.4	8.5	15.6	13	6.0	2.3	4.1	2	1	1	3	3	3	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
Seryl_tRNA_N	PF02403.17	gi|557695051|ref|YP_008798105.1|	-	2.4	8.1	36.9	0.063	13.3	4.9	4.9	3	1	1	5	5	5	0	Seryl-tRNA	synthetase	N-terminal	domain
ATG16	PF08614.6	gi|557695051|ref|YP_008798105.1|	-	2.7	7.7	39.6	7.9	6.2	14.8	3.7	2	1	1	3	3	3	0	Autophagy	protein	16	(ATG16)
DUF972	PF06156.8	gi|557695051|ref|YP_008798105.1|	-	3.1	8.1	41.2	0.18	12.1	0.4	5.5	2	1	3	5	5	5	0	Protein	of	unknown	function	(DUF972)
CDC37_N	PF03234.9	gi|557695051|ref|YP_008798105.1|	-	3.9	7.7	26.8	1.3	9.3	2.8	3.1	1	1	1	2	2	2	0	Cdc37	N	terminal	kinase	binding
DUF2203	PF09969.4	gi|557695051|ref|YP_008798105.1|	-	4.5	7.5	30.2	0.7	10.1	0.4	5.0	1	1	3	5	5	5	0	Uncharacterized	conserved	protein	(DUF2203)
DUF479	PF04336.7	gi|557695051|ref|YP_008798105.1|	-	5.4	7.1	17.9	2.8	8.0	0.0	5.2	3	2	3	6	6	6	0	Protein	of	unknown	function,	DUF479
DUF4446	PF14584.1	gi|557695051|ref|YP_008798105.1|	-	9.5	6.0	25.3	0.26	11.0	0.9	4.9	2	1	3	5	5	5	0	Protein	of	unknown	function	(DUF4446)
FliJ	PF02050.11	gi|557695051|ref|YP_008798105.1|	-	9.9	6.2	40.2	0.72	9.9	9.1	5.5	3	2	3	6	6	6	0	Flagellar	FliJ	protein
Penicillinase_R	PF03965.11	gi|557695052|ref|YP_008798106.1|	-	0.089	12.8	0.0	0.15	12.1	0.0	1.4	1	0	0	1	1	1	0	Penicillinase	repressor
DUF1803	PF08820.5	gi|557695052|ref|YP_008798106.1|	-	0.099	12.3	0.0	0.13	11.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
DUF1366	PF07104.6	gi|557695052|ref|YP_008798106.1|	-	0.12	11.9	0.2	4.3	6.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1366)
Hjc	PF01870.13	gi|557695053|ref|YP_008798107.1|	-	4.5e-18	64.6	0.0	7.8e-18	63.8	0.0	1.4	1	1	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
NERD	PF08378.6	gi|557695053|ref|YP_008798107.1|	-	0.0014	18.8	0.0	0.0018	18.5	0.0	1.2	1	0	0	1	1	1	1	Nuclease-related	domain
DUF1272	PF06906.6	gi|557695053|ref|YP_008798107.1|	-	0.11	12.2	0.1	0.18	11.6	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
DUF3883	PF13020.1	gi|557695053|ref|YP_008798107.1|	-	0.15	11.7	0.0	0.26	11.0	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3883)
HTH_24	PF13412.1	gi|557695054|ref|YP_008798108.1|	-	2.5e-15	55.5	0.0	1.3e-13	50.0	0.0	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|557695054|ref|YP_008798108.1|	-	3.5e-15	55.2	0.0	6.6e-15	54.3	0.0	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|557695054|ref|YP_008798108.1|	-	1.1e-12	47.5	0.1	1.5e-12	47.0	0.0	1.2	1	0	0	1	1	1	1	AsnC	family
TrmB	PF01978.14	gi|557695054|ref|YP_008798108.1|	-	8.7e-06	25.3	0.1	0.00033	20.2	0.0	2.4	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|557695054|ref|YP_008798108.1|	-	3e-05	23.7	0.0	7.8e-05	22.3	0.0	1.7	2	0	0	2	2	1	1	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|557695054|ref|YP_008798108.1|	-	4.2e-05	22.6	0.0	0.0071	15.5	0.0	2.4	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_DeoR	PF08220.7	gi|557695054|ref|YP_008798108.1|	-	6.1e-05	22.4	0.3	0.00029	20.3	0.0	2.1	3	0	0	3	3	2	1	DeoR-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|557695054|ref|YP_008798108.1|	-	0.00012	21.6	0.0	0.001	18.7	0.0	2.4	3	0	0	3	3	3	1	Bacterial	regulatory	protein,	arsR	family
FeoC	PF09012.5	gi|557695054|ref|YP_008798108.1|	-	0.00013	21.6	0.0	0.00064	19.3	0.0	2.0	2	0	0	2	2	2	1	FeoC	like	transcriptional	regulator
MarR_2	PF12802.2	gi|557695054|ref|YP_008798108.1|	-	0.00019	21.0	0.1	0.0058	16.2	0.0	2.2	2	0	0	2	2	2	1	MarR	family
HTH_11	PF08279.7	gi|557695054|ref|YP_008798108.1|	-	0.0013	18.3	1.3	0.0048	16.5	0.0	2.4	3	0	0	3	3	3	1	HTH	domain
HTH_23	PF13384.1	gi|557695054|ref|YP_008798108.1|	-	0.002	17.7	0.1	0.022	14.3	0.0	2.5	3	0	0	3	3	3	1	Homeodomain-like	domain
HTH_IclR	PF09339.5	gi|557695054|ref|YP_008798108.1|	-	0.0027	17.2	0.0	0.032	13.8	0.0	2.4	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
MarR	PF01047.17	gi|557695054|ref|YP_008798108.1|	-	0.0027	17.3	0.1	0.061	13.0	0.0	2.3	2	0	0	2	2	2	1	MarR	family
Sigma70_r4	PF04545.11	gi|557695054|ref|YP_008798108.1|	-	0.0031	16.7	0.1	0.049	12.9	0.0	2.5	3	0	0	3	3	3	1	Sigma-70,	region	4
HTH_38	PF13936.1	gi|557695054|ref|YP_008798108.1|	-	0.0033	16.9	0.1	0.042	13.4	0.0	2.4	3	0	0	3	3	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|557695054|ref|YP_008798108.1|	-	0.004	16.5	0.0	0.0096	15.3	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
NapD	PF03927.8	gi|557695054|ref|YP_008798108.1|	-	0.0059	16.4	0.0	0.0094	15.7	0.0	1.2	1	0	0	1	1	1	1	NapD	protein
ACT_4	PF13291.1	gi|557695054|ref|YP_008798108.1|	-	0.0061	16.8	2.3	0.12	12.7	0.1	2.7	2	1	0	2	2	2	1	ACT	domain
HTH_Mga	PF08280.6	gi|557695054|ref|YP_008798108.1|	-	0.0071	16.0	0.0	0.019	14.7	0.0	1.7	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_27	PF13463.1	gi|557695054|ref|YP_008798108.1|	-	0.01	16.1	0.2	1.9	8.8	0.0	2.9	3	0	0	3	3	3	0	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|557695054|ref|YP_008798108.1|	-	0.012	15.1	0.7	0.45	10.0	0.0	2.3	1	1	1	2	2	2	0	TFIIE	alpha	subunit
Mga	PF05043.8	gi|557695054|ref|YP_008798108.1|	-	0.014	15.6	0.0	0.059	13.6	0.0	2.0	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
CENP-B_N	PF04218.8	gi|557695054|ref|YP_008798108.1|	-	0.016	14.5	0.1	0.62	9.5	0.0	2.3	2	0	0	2	2	2	0	CENP-B	N-terminal	DNA-binding	domain
APG17	PF04108.7	gi|557695054|ref|YP_008798108.1|	-	0.019	13.7	0.1	0.023	13.5	0.0	1.0	1	0	0	1	1	1	0	Autophagy	protein	Apg17
GerE	PF00196.14	gi|557695054|ref|YP_008798108.1|	-	0.028	13.7	0.1	0.14	11.5	0.0	2.1	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	luxR	family
HTH_29	PF13551.1	gi|557695054|ref|YP_008798108.1|	-	0.029	14.4	0.0	8	6.6	0.0	2.9	1	1	2	3	3	3	0	Winged	helix-turn	helix
HTH_36	PF13730.1	gi|557695054|ref|YP_008798108.1|	-	0.034	14.2	0.0	10	6.3	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|557695054|ref|YP_008798108.1|	-	0.04	13.9	0.0	0.72	9.9	0.0	2.6	2	1	0	2	2	2	0	Helix-turn-helix	domain
FaeA	PF04703.7	gi|557695054|ref|YP_008798108.1|	-	0.049	13.7	0.0	0.14	12.3	0.0	1.7	1	0	0	1	1	1	0	FaeA-like	protein
DUF4423	PF14394.1	gi|557695054|ref|YP_008798108.1|	-	0.053	13.0	0.0	1.2	8.6	0.0	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_Crp_2	PF13545.1	gi|557695054|ref|YP_008798108.1|	-	0.056	13.2	0.0	5.3	6.9	0.0	2.3	1	1	1	2	2	2	0	Crp-like	helix-turn-helix	domain
Rrf2	PF02082.15	gi|557695054|ref|YP_008798108.1|	-	0.058	13.5	0.1	1.2	9.2	0.0	2.6	2	1	1	3	3	3	0	Transcriptional	regulator
DUF2042	PF09743.4	gi|557695054|ref|YP_008798108.1|	-	0.066	12.5	0.1	0.21	10.8	0.1	1.8	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2042)
HTH_30	PF13556.1	gi|557695054|ref|YP_008798108.1|	-	0.079	12.5	0.0	0.29	10.7	0.0	2.0	2	0	0	2	2	1	0	PucR	C-terminal	helix-turn-helix	domain
DUF2250	PF10007.4	gi|557695054|ref|YP_008798108.1|	-	0.097	12.5	0.1	2.7	7.9	0.0	2.5	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4089	PF13318.1	gi|557695054|ref|YP_008798108.1|	-	0.13	12.5	0.1	0.29	11.4	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4089)
PaaX	PF07848.7	gi|557695054|ref|YP_008798108.1|	-	0.16	11.9	0.3	1.8	8.6	0.1	2.3	2	0	0	2	2	2	0	PaaX-like	protein
SHMT	PF00464.14	gi|557695055|ref|YP_008798109.1|	-	7.3e-36	123.3	0.0	1.7e-34	118.8	0.0	2.0	1	1	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.16	gi|557695055|ref|YP_008798109.1|	-	6.3e-06	25.5	0.0	9.1e-06	25.0	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|557695055|ref|YP_008798109.1|	-	0.00046	19.3	0.1	0.0009	18.3	0.1	1.5	1	1	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
SelA	PF03841.8	gi|557695055|ref|YP_008798109.1|	-	0.00072	18.4	0.0	0.001	17.8	0.0	1.2	1	0	0	1	1	1	1	L-seryl-tRNA	selenium	transferase
Cys_Met_Meta_PP	PF01053.15	gi|557695055|ref|YP_008798109.1|	-	0.00086	17.6	0.0	0.0013	17.1	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|557695055|ref|YP_008798109.1|	-	0.001	18.0	0.0	0.0022	17.0	0.0	1.6	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|557695055|ref|YP_008798109.1|	-	0.0032	16.2	0.0	0.0046	15.7	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
GHMP_kinases_N	PF00288.21	gi|557695056|ref|YP_008798110.1|	-	0.0064	16.5	0.7	0.012	15.6	0.5	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
Abhydrolase_6	PF12697.2	gi|557695056|ref|YP_008798110.1|	-	0.043	13.6	0.3	0.075	12.8	0.1	1.5	2	0	0	2	2	2	0	Alpha/beta	hydrolase	family
Antitoxin-MazE	PF04014.13	gi|557695057|ref|YP_008798111.1|	-	0.0017	17.9	0.2	0.0028	17.3	0.1	1.4	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
HTH_45	PF14947.1	gi|557695058|ref|YP_008798112.1|	-	1.6e-29	101.5	1.1	1.8e-29	101.3	0.8	1.0	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.1	gi|557695058|ref|YP_008798112.1|	-	0.00034	20.2	0.2	0.0004	20.0	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
TrmB	PF01978.14	gi|557695058|ref|YP_008798112.1|	-	0.0015	18.1	0.2	0.002	17.7	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF1694	PF07997.6	gi|557695058|ref|YP_008798112.1|	-	0.039	13.8	0.1	0.042	13.7	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1694)
Rio2_N	PF09202.6	gi|557695058|ref|YP_008798112.1|	-	0.053	13.5	0.1	0.068	13.2	0.0	1.2	1	0	0	1	1	1	0	Rio2,	N-terminal
HTH_27	PF13463.1	gi|557695058|ref|YP_008798112.1|	-	0.07	13.4	0.0	0.087	13.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_12	PF08461.5	gi|557695058|ref|YP_008798112.1|	-	0.087	12.5	0.3	0.15	11.8	0.2	1.6	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
DUF3895	PF13034.1	gi|557695058|ref|YP_008798112.1|	-	0.1	12.0	0.2	0.19	11.2	0.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3895)
Laminin_II	PF06009.7	gi|557695058|ref|YP_008798112.1|	-	0.13	12.0	0.3	0.14	11.8	0.2	1.1	1	0	0	1	1	1	0	Laminin	Domain	II
Cation_ATPase_N	PF00690.21	gi|557695059|ref|YP_008798113.1|	-	0.51	9.8	2.6	1.2	8.6	1.8	1.6	1	0	0	1	1	1	0	Cation	transporter/ATPase,	N-terminus
ACC_epsilon	PF13822.1	gi|557695060|ref|YP_008798114.1|	-	0.0096	16.2	0.3	0.018	15.3	0.2	1.5	1	0	0	1	1	1	1	Acyl-CoA	carboxylase	epsilon	subunit
Big_5	PF13205.1	gi|557695060|ref|YP_008798114.1|	-	0.09	13.3	2.6	0.21	12.2	1.8	1.7	1	1	0	1	1	1	0	Bacterial	Ig-like	domain
Cadherin-like	PF12733.2	gi|557695060|ref|YP_008798114.1|	-	0.093	13.0	0.1	0.14	12.4	0.1	1.3	1	0	0	1	1	1	0	Cadherin-like	beta	sandwich	domain
TPP_enzyme_C	PF02775.16	gi|557695061|ref|YP_008798115.1|	-	1.3e-30	105.9	0.1	2.6e-30	105.0	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|557695061|ref|YP_008798115.1|	-	3.1e-08	33.4	0.0	2.7e-06	27.1	0.0	2.5	2	1	0	2	2	2	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
Cas_csx3	PF09620.5	gi|557695061|ref|YP_008798115.1|	-	0.09	12.5	0.0	0.18	11.6	0.0	1.5	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_csx3)
ATP13	PF12921.2	gi|557695061|ref|YP_008798115.1|	-	0.1	11.9	0.0	0.43	9.9	0.0	1.8	2	0	0	2	2	2	0	Mitochondrial	ATPase	expression
POR_N	PF01855.14	gi|557695062|ref|YP_008798116.1|	-	6.9e-61	205.6	0.0	1e-60	205.1	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|557695062|ref|YP_008798116.1|	-	2.9e-31	108.7	0.1	5.5e-31	107.7	0.1	1.4	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_N	PF02776.13	gi|557695062|ref|YP_008798116.1|	-	1.2e-05	24.8	0.0	2.5e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Transketolase_C	PF02780.15	gi|557695062|ref|YP_008798116.1|	-	0.00022	21.1	0.0	0.00054	19.8	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
HSP20	PF00011.16	gi|557695063|ref|YP_008798117.1|	-	4.3e-13	49.0	4.2	1e-11	44.6	2.9	2.3	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
GvpH	PF05455.6	gi|557695063|ref|YP_008798117.1|	-	9.7e-06	25.3	0.0	1.3e-05	24.8	0.0	1.2	1	0	0	1	1	1	1	GvpH
CS	PF04969.11	gi|557695063|ref|YP_008798117.1|	-	0.00018	21.9	1.0	0.00027	21.4	0.7	1.2	1	0	0	1	1	1	1	CS	domain
PIH1	PF08190.7	gi|557695063|ref|YP_008798117.1|	-	0.002	17.6	0.1	0.0028	17.1	0.1	1.1	1	0	0	1	1	1	1	pre-RNA	processing	PIH1/Nop17
DUF2807	PF10988.3	gi|557695063|ref|YP_008798117.1|	-	0.034	13.6	0.5	0.044	13.3	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2807)
PrgU	PF09627.5	gi|557695063|ref|YP_008798117.1|	-	0.059	12.9	0.1	0.094	12.3	0.0	1.4	1	0	0	1	1	1	0	PrgU-like	protein
DPCD	PF14913.1	gi|557695063|ref|YP_008798117.1|	-	0.088	11.9	0.1	0.088	11.9	0.1	1.8	2	0	0	2	2	2	0	DPCD	protein	family
Glycos_transf_2	PF00535.21	gi|557695064|ref|YP_008798118.1|	-	3.5e-25	88.6	0.0	5.3e-25	88.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|557695064|ref|YP_008798118.1|	-	1.6e-20	73.9	0.3	2.4e-20	73.3	0.2	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|557695064|ref|YP_008798118.1|	-	4.3e-14	52.1	0.4	1e-13	50.9	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_4	PF13704.1	gi|557695064|ref|YP_008798118.1|	-	2e-07	31.2	0.1	4.4e-07	30.1	0.1	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|557695064|ref|YP_008798118.1|	-	1.1e-05	24.7	0.0	2.6e-05	23.4	0.0	1.7	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|557695064|ref|YP_008798118.1|	-	0.001	18.7	6.2	0.002	17.8	4.3	1.5	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Methyltransf_26	PF13659.1	gi|557695065|ref|YP_008798119.1|	-	1.5e-08	34.6	0.0	2.8e-08	33.7	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|557695065|ref|YP_008798119.1|	-	9.5e-07	28.5	0.0	0.00045	19.7	0.0	2.3	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_11	PF08241.7	gi|557695065|ref|YP_008798119.1|	-	0.00097	19.5	0.0	0.084	13.3	0.0	2.7	2	0	0	2	2	2	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|557695065|ref|YP_008798119.1|	-	0.0029	17.2	0.0	0.0048	16.5	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
DJ-1_PfpI	PF01965.19	gi|557695066|ref|YP_008798120.1|	-	3.4e-42	143.3	0.0	3.9e-42	143.1	0.0	1.0	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|557695066|ref|YP_008798120.1|	-	1.9e-19	69.5	0.0	2.4e-19	69.1	0.0	1.1	1	0	0	1	1	1	1	Putative	amidotransferase
GATase_3	PF07685.9	gi|557695066|ref|YP_008798120.1|	-	0.0022	17.6	0.0	0.003	17.1	0.0	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.23	gi|557695066|ref|YP_008798120.1|	-	0.0035	16.8	0.0	0.0039	16.6	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|557695066|ref|YP_008798120.1|	-	0.03	13.7	0.0	0.041	13.3	0.0	1.4	1	1	0	1	1	1	0	Peptidase	C26
GATase_5	PF13507.1	gi|557695066|ref|YP_008798120.1|	-	0.031	13.1	0.0	0.039	12.8	0.0	1.2	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
DUF59	PF01883.14	gi|557695067|ref|YP_008798121.1|	-	2.5e-18	65.8	0.7	3.4e-18	65.4	0.5	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
GMP_synt_C	PF00958.17	gi|557695067|ref|YP_008798121.1|	-	0.09	12.4	0.1	0.15	11.7	0.0	1.4	1	0	0	1	1	1	0	GMP	synthase	C	terminal	domain
tRNA-synt_1	PF00133.17	gi|557695068|ref|YP_008798122.1|	-	9.7e-116	387.1	0.0	1.3e-114	383.3	0.0	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|557695068|ref|YP_008798122.1|	-	3.5e-32	111.2	0.1	6.4e-32	110.4	0.0	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|557695068|ref|YP_008798122.1|	-	3.6e-28	98.3	0.0	1.8e-13	49.9	0.0	4.2	3	2	1	4	4	4	3	tRNA	synthetases	class	I	(M)
DZR	PF12773.2	gi|557695068|ref|YP_008798122.1|	-	0.0001	22.0	0.5	0.043	13.6	0.2	2.5	2	0	0	2	2	2	1	Double	zinc	ribbon
tRNA-synt_1_2	PF13603.1	gi|557695068|ref|YP_008798122.1|	-	0.00055	19.2	0.0	0.0016	17.7	0.0	1.7	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
zinc_ribbon_2	PF13240.1	gi|557695068|ref|YP_008798122.1|	-	0.0016	17.8	5.4	0.11	11.9	1.3	2.7	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|557695068|ref|YP_008798122.1|	-	0.0021	17.2	7.2	0.45	9.7	2.4	3.0	2	1	1	3	3	3	2	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|557695068|ref|YP_008798122.1|	-	0.0043	16.3	1.4	2.8	7.3	0.2	3.3	3	0	0	3	3	3	1	TFIIB	zinc-binding
tRNA-synt_1f	PF01921.13	gi|557695068|ref|YP_008798122.1|	-	0.027	13.1	0.0	0.12	11.0	0.0	1.9	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
zf-TFIIB	PF13453.1	gi|557695068|ref|YP_008798122.1|	-	0.034	13.3	1.5	6.5	6.0	0.0	3.4	3	0	0	3	3	3	0	Transcription	factor	zinc-finger
BIR	PF00653.16	gi|557695068|ref|YP_008798122.1|	-	0.034	14.5	0.0	0.74	10.2	0.0	2.8	2	0	0	2	2	2	0	Inhibitor	of	Apoptosis	domain
tRNA-synt_1e	PF01406.14	gi|557695068|ref|YP_008798122.1|	-	0.044	12.8	0.0	0.43	9.6	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
Zn_ribbon_2	PF12674.2	gi|557695068|ref|YP_008798122.1|	-	0.15	12.4	0.3	36	4.8	0.1	2.9	3	0	0	3	3	2	0	Putative	zinc	ribbon	domain
HypA	PF01155.14	gi|557695068|ref|YP_008798122.1|	-	0.19	11.4	0.3	1.1	9.0	0.1	2.1	2	0	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-ISL3	PF14690.1	gi|557695068|ref|YP_008798122.1|	-	0.21	11.6	4.2	1.7	8.7	0.0	3.1	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Auto_anti-p27	PF06677.7	gi|557695068|ref|YP_008798122.1|	-	0.31	10.8	3.3	39	4.1	0.0	3.4	3	0	0	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Nudix_N_2	PF14803.1	gi|557695068|ref|YP_008798122.1|	-	0.66	9.7	6.8	13	5.5	0.0	3.4	2	1	0	2	2	2	0	Nudix	N-terminal
Zn-ribbon_8	PF09723.5	gi|557695068|ref|YP_008798122.1|	-	0.71	9.8	4.5	1.7	8.6	1.4	2.6	2	1	0	2	2	2	0	Zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|557695068|ref|YP_008798122.1|	-	0.91	9.8	3.6	44	4.4	0.2	3.0	2	1	1	3	3	3	0	Restriction	alleviation	protein	Lar
DNA_ligase_ZBD	PF03119.11	gi|557695068|ref|YP_008798122.1|	-	1.6	8.4	4.8	22	4.8	0.0	3.2	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
RRN7	PF11781.3	gi|557695068|ref|YP_008798122.1|	-	4.5	6.8	10.3	4.1	7.0	0.2	3.4	4	0	0	4	4	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
DUF35_N	PF12172.3	gi|557695068|ref|YP_008798122.1|	-	5.1	7.1	5.8	20	5.2	0.3	3.2	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
NUDIX	PF00293.23	gi|557695069|ref|YP_008798123.1|	-	1.4e-16	60.3	0.1	1.7e-16	60.0	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
BphX	PF06139.7	gi|557695069|ref|YP_008798123.1|	-	0.079	12.5	0.0	0.098	12.2	0.0	1.4	1	1	0	1	1	1	0	BphX-like
HTH_20	PF12840.2	gi|557695071|ref|YP_008798125.1|	-	1e-08	34.8	0.0	2.2e-08	33.7	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|557695071|ref|YP_008798125.1|	-	2.1e-07	30.4	0.0	9.2e-07	28.4	0.0	2.0	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|557695071|ref|YP_008798125.1|	-	7.9e-06	25.1	0.0	1.6e-05	24.1	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|557695071|ref|YP_008798125.1|	-	0.0039	17.1	0.1	0.011	15.8	0.0	1.8	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Mga	PF08280.6	gi|557695071|ref|YP_008798125.1|	-	0.02	14.6	0.0	0.04	13.6	0.0	1.5	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_11	PF08279.7	gi|557695071|ref|YP_008798125.1|	-	0.042	13.4	0.0	0.082	12.5	0.0	1.5	1	0	0	1	1	1	0	HTH	domain
Yip1	PF04893.12	gi|557695071|ref|YP_008798125.1|	-	0.32	10.4	22.7	0.51	9.8	15.7	1.2	1	0	0	1	1	1	0	Yip1	domain
DUF2755	PF10954.3	gi|557695071|ref|YP_008798125.1|	-	6.2	6.5	8.7	0.6	9.8	1.2	2.8	3	2	1	4	4	4	0	Protein	of	unknown	function	(DUF2755)
UbiA	PF01040.13	gi|557695072|ref|YP_008798126.1|	-	2.6e-34	118.6	30.2	3.2e-34	118.3	21.0	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
SfsA	PF03749.8	gi|557695073|ref|YP_008798127.1|	-	2.1e-46	158.0	0.0	2.6e-46	157.8	0.0	1.0	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein
Endonuc_Holl	PF10107.4	gi|557695073|ref|YP_008798127.1|	-	0.08	12.6	0.0	0.12	12.0	0.0	1.2	1	0	0	1	1	1	0	Endonuclease	related	to	archaeal	Holliday	junction	resolvase
RecO_N_2	PF13114.1	gi|557695073|ref|YP_008798127.1|	-	0.1	12.3	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	RecO	N	terminal
Citrate_synt	PF00285.16	gi|557695074|ref|YP_008798128.1|	-	7.3e-136	452.5	0.0	8.2e-136	452.3	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
AMP-binding	PF00501.23	gi|557695075|ref|YP_008798129.1|	-	1.3e-101	340.0	0.0	1.8e-101	339.5	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|557695075|ref|YP_008798129.1|	-	4.3e-15	56.4	2.4	1.2e-14	54.9	0.8	2.4	3	0	0	3	3	3	1	AMP-binding	enzyme	C-terminal	domain
Met_10	PF02475.11	gi|557695077|ref|YP_008798131.1|	-	1.1e-49	168.7	0.0	1.5e-49	168.3	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_26	PF13659.1	gi|557695077|ref|YP_008798131.1|	-	4.6e-08	33.0	0.0	6.8e-08	32.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|557695077|ref|YP_008798131.1|	-	5e-07	29.4	0.0	8.1e-07	28.7	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
DNA_methylase	PF00145.12	gi|557695077|ref|YP_008798131.1|	-	2e-05	23.8	0.0	3.1e-05	23.2	0.0	1.2	1	0	0	1	1	1	1	C-5	cytosine-specific	DNA	methylase
Methyltransf_18	PF12847.2	gi|557695077|ref|YP_008798131.1|	-	2.5e-05	24.8	0.0	4.5e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|557695077|ref|YP_008798131.1|	-	6.6e-05	22.3	0.0	0.00011	21.6	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
MTS	PF05175.9	gi|557695077|ref|YP_008798131.1|	-	0.00019	20.8	0.0	0.00031	20.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
N6_N4_Mtase	PF01555.13	gi|557695077|ref|YP_008798131.1|	-	0.00028	20.4	0.0	0.0011	18.5	0.0	1.8	2	0	0	2	2	2	1	DNA	methylase
PrmA	PF06325.8	gi|557695077|ref|YP_008798131.1|	-	0.00054	19.1	0.0	0.0008	18.6	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
RrnaAD	PF00398.15	gi|557695077|ref|YP_008798131.1|	-	0.01	14.8	0.0	0.017	14.1	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_31	PF13847.1	gi|557695077|ref|YP_008798131.1|	-	0.013	15.1	0.0	0.018	14.6	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_21	PF05050.7	gi|557695077|ref|YP_008798131.1|	-	0.041	13.8	0.0	0.063	13.2	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	FkbM	domain
TRM	PF02005.11	gi|557695077|ref|YP_008798131.1|	-	0.076	11.9	0.0	0.094	11.6	0.0	1.2	1	0	0	1	1	1	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
Smoothelin	PF12510.3	gi|557695077|ref|YP_008798131.1|	-	0.27	11.1	2.3	0.59	10.0	0.8	2.1	2	0	0	2	2	2	0	Smoothelin	cytoskeleton	protein
Ribosomal_S25	PF03297.10	gi|557695078|ref|YP_008798132.1|	-	1.6e-11	44.1	1.2	1.6e-11	44.1	0.8	2.0	1	1	1	2	2	2	1	S25	ribosomal	protein
FeoC	PF09012.5	gi|557695078|ref|YP_008798132.1|	-	7.1e-05	22.4	0.0	0.00011	21.8	0.0	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
MarR_2	PF12802.2	gi|557695078|ref|YP_008798132.1|	-	0.00012	21.6	0.1	0.00019	20.9	0.1	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|557695078|ref|YP_008798132.1|	-	0.0033	17.1	0.3	0.0052	16.4	0.2	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF2250	PF10007.4	gi|557695078|ref|YP_008798132.1|	-	0.0065	16.3	0.1	0.016	15.1	0.1	1.9	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.15	gi|557695078|ref|YP_008798132.1|	-	0.007	16.4	0.1	0.011	15.7	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
Penicillinase_R	PF03965.11	gi|557695078|ref|YP_008798132.1|	-	0.024	14.6	0.1	0.034	14.2	0.1	1.3	1	0	0	1	1	1	0	Penicillinase	repressor
EAP30	PF04157.11	gi|557695078|ref|YP_008798132.1|	-	0.047	12.8	0.0	0.067	12.3	0.0	1.3	1	0	0	1	1	1	0	EAP30/Vps36	family
HTH_24	PF13412.1	gi|557695078|ref|YP_008798132.1|	-	0.054	12.8	0.0	0.084	12.2	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Cyclophil_like	PF04126.8	gi|557695079|ref|YP_008798133.1|	-	6.3e-12	45.1	0.0	7.4e-12	44.9	0.0	1.2	1	0	0	1	1	1	1	Cyclophilin-like
DUF3830	PF12903.2	gi|557695079|ref|YP_008798133.1|	-	0.037	13.4	0.0	0.044	13.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3830)
PhosphMutase	PF10143.4	gi|557695080|ref|YP_008798134.1|	-	3e-63	212.5	0.0	9.8e-63	210.8	0.0	1.7	2	0	0	2	2	2	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.13	gi|557695080|ref|YP_008798134.1|	-	2e-46	158.4	0.0	2.2e-46	158.2	0.0	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.17	gi|557695080|ref|YP_008798134.1|	-	8.2e-05	22.0	0.1	0.00019	20.8	0.0	1.4	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
DUF3538	PF12057.3	gi|557695080|ref|YP_008798134.1|	-	0.055	13.0	0.1	0.81	9.3	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3538)
Sulfatase	PF00884.18	gi|557695080|ref|YP_008798134.1|	-	0.17	11.0	0.0	0.45	9.6	0.0	1.6	2	0	0	2	2	2	0	Sulfatase
Rad51	PF08423.6	gi|557695081|ref|YP_008798135.1|	-	1.1e-89	299.8	0.0	1.3e-89	299.4	0.0	1.1	1	0	0	1	1	1	1	Rad51
AAA_25	PF13481.1	gi|557695081|ref|YP_008798135.1|	-	3.6e-13	49.3	0.0	6e-13	48.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
HHH_5	PF14520.1	gi|557695081|ref|YP_008798135.1|	-	3.9e-12	46.1	0.2	3.9e-12	46.1	0.1	2.0	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
KaiC	PF06745.8	gi|557695081|ref|YP_008798135.1|	-	1.6e-11	43.8	0.0	2.5e-11	43.1	0.0	1.4	1	0	0	1	1	1	1	KaiC
RecA	PF00154.16	gi|557695081|ref|YP_008798135.1|	-	1.7e-09	37.1	0.3	5.7e-09	35.4	0.0	1.8	1	1	1	2	2	2	1	recA	bacterial	DNA	recombination	protein
AAA_22	PF13401.1	gi|557695081|ref|YP_008798135.1|	-	0.0034	17.5	0.0	0.0065	16.6	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
HHH	PF00633.18	gi|557695081|ref|YP_008798135.1|	-	0.0097	15.5	0.0	0.69	9.7	0.0	2.7	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
GalP_UDP_tr_C	PF02744.12	gi|557695081|ref|YP_008798135.1|	-	0.01	15.3	0.1	0.085	12.3	0.1	2.4	1	1	1	2	2	2	0	Galactose-1-phosphate	uridyl	transferase,	C-terminal	domain
Cdd1	PF11731.3	gi|557695081|ref|YP_008798135.1|	-	0.012	15.5	0.0	0.022	14.6	0.0	1.5	1	0	0	1	1	1	0	Pathogenicity	locus
IMS_HHH	PF11798.3	gi|557695081|ref|YP_008798135.1|	-	0.027	14.5	0.0	0.082	12.9	0.0	1.9	1	0	0	1	1	1	0	IMS	family	HHH	motif
IL12	PF03039.9	gi|557695081|ref|YP_008798135.1|	-	0.11	11.6	0.2	0.16	11.0	0.2	1.2	1	0	0	1	1	1	0	Interleukin-12	alpha	subunit
Pribosyltran	PF00156.22	gi|557695081|ref|YP_008798135.1|	-	0.27	10.9	2.2	2.6	7.8	0.1	2.6	2	1	0	2	2	2	0	Phosphoribosyl	transferase	domain
TPR_19	PF14559.1	gi|557695082|ref|YP_008798136.1|	-	0.0049	17.1	0.0	0.0098	16.2	0.0	1.5	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|557695082|ref|YP_008798136.1|	-	0.03	14.9	0.1	0.064	13.9	0.0	1.5	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|557695082|ref|YP_008798136.1|	-	0.038	14.4	0.1	0.084	13.3	0.0	1.7	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|557695082|ref|YP_008798136.1|	-	0.12	13.0	0.0	0.21	12.2	0.0	1.4	1	0	0	1	1	1	0	Tetratricopeptide	repeat
DNA_primase_lrg	PF04104.9	gi|557695082|ref|YP_008798136.1|	-	0.13	11.5	0.3	0.16	11.1	0.2	1.1	1	0	0	1	1	1	0	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
Rab5ip	PF07019.7	gi|557695083|ref|YP_008798137.1|	-	0.0012	18.9	4.2	0.0014	18.6	2.9	1.1	1	0	0	1	1	1	1	Rab5-interacting	protein	(Rab5ip)
NfeD	PF01957.13	gi|557695083|ref|YP_008798137.1|	-	0.034	14.2	0.5	0.041	14.0	0.4	1.1	1	0	0	1	1	1	0	NfeD-like	C-terminal,	partner-binding
SieB	PF14163.1	gi|557695083|ref|YP_008798137.1|	-	0.041	13.4	0.1	0.054	13.0	0.1	1.1	1	0	0	1	1	1	0	Superinfection	exclusion	protein	B
CbtA	PF09490.5	gi|557695083|ref|YP_008798137.1|	-	0.078	12.2	2.4	0.19	11.0	0.1	1.9	1	1	1	2	2	2	0	Probable	cobalt	transporter	subunit	(CbtA)
Sec62	PF03839.11	gi|557695083|ref|YP_008798137.1|	-	0.15	11.4	3.2	0.19	11.1	2.2	1.1	1	0	0	1	1	1	0	Translocation	protein	Sec62
RseC_MucC	PF04246.7	gi|557695083|ref|YP_008798137.1|	-	0.2	11.1	1.1	0.22	11.0	0.2	1.5	1	1	1	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
FbpA	PF05833.6	gi|557695084|ref|YP_008798138.1|	-	3.4e-44	151.1	0.0	5.1e-44	150.5	0.0	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|557695084|ref|YP_008798138.1|	-	8.7e-19	67.2	0.0	2.2e-18	65.9	0.0	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF814)
Ribosomal_S13	PF00416.17	gi|557695084|ref|YP_008798138.1|	-	1.6e-05	25.3	0.0	5.5e-05	23.5	0.0	2.0	1	1	0	1	1	1	1	Ribosomal	protein	S13/S18
MIase	PF02426.11	gi|557695084|ref|YP_008798138.1|	-	0.076	12.8	0.0	0.3	10.9	0.0	2.0	1	0	0	1	1	1	0	Muconolactone	delta-isomerase
zf-CpG_bind_C	PF12269.3	gi|557695084|ref|YP_008798138.1|	-	0.098	12.1	0.8	0.54	9.6	0.1	2.1	2	0	0	2	2	2	0	CpG	binding	protein	zinc	finger	C	terminal	domain
Prefoldin_2	PF01920.15	gi|557695084|ref|YP_008798138.1|	-	0.13	12.0	4.3	0.1	12.3	0.2	2.5	2	0	0	2	2	2	0	Prefoldin	subunit
Lge1	PF11488.3	gi|557695084|ref|YP_008798138.1|	-	2.2	8.5	6.2	0.9	9.7	0.2	2.8	2	1	0	2	2	2	0	Transcriptional	regulatory	protein	LGE1
Seryl_tRNA_N	PF02403.17	gi|557695084|ref|YP_008798138.1|	-	8.5	6.4	8.6	6.9	6.7	0.1	3.1	4	0	0	4	4	4	0	Seryl-tRNA	synthetase	N-terminal	domain
CBS	PF00571.23	gi|557695085|ref|YP_008798139.1|	-	7e-29	99.3	5.0	1.6e-14	53.3	0.3	2.2	2	0	0	2	2	2	2	CBS	domain
PhnA_Zn_Ribbon	PF08274.7	gi|557695085|ref|YP_008798139.1|	-	0.37	10.5	2.6	0.58	9.9	1.8	1.3	1	0	0	1	1	1	0	PhnA	Zinc-Ribbon
Mut7-C	PF01927.11	gi|557695086|ref|YP_008798140.1|	-	4.4e-32	111.0	5.2	2.5e-31	108.6	3.6	1.8	1	1	0	1	1	1	1	Mut7-C	RNAse	domain
Zn_Tnp_IS1595	PF12760.2	gi|557695086|ref|YP_008798140.1|	-	0.005	16.6	0.7	0.0077	16.0	0.5	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
zf-BED	PF02892.10	gi|557695086|ref|YP_008798140.1|	-	0.027	14.2	1.6	0.027	14.2	1.1	1.6	1	1	0	1	1	1	0	BED	zinc	finger
TroA	PF01297.12	gi|557695086|ref|YP_008798140.1|	-	0.035	13.3	0.0	0.042	13.0	0.0	1.1	1	0	0	1	1	1	0	Periplasmic	solute	binding	protein	family
zinc-ribbons_6	PF07191.7	gi|557695086|ref|YP_008798140.1|	-	0.038	13.7	0.0	0.056	13.2	0.0	1.2	1	0	0	1	1	1	0	zinc-ribbons
ADK_lid	PF05191.9	gi|557695086|ref|YP_008798140.1|	-	0.071	12.7	1.8	0.32	10.7	0.5	2.1	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
DUF188	PF02639.9	gi|557695086|ref|YP_008798140.1|	-	0.083	12.3	0.1	0.13	11.7	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
DNA_ligase_ZBD	PF03119.11	gi|557695086|ref|YP_008798140.1|	-	0.11	12.1	0.4	0.19	11.4	0.3	1.4	1	0	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
ADH_zinc_N	PF00107.21	gi|557695086|ref|YP_008798140.1|	-	0.11	11.9	0.1	0.17	11.4	0.1	1.2	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
OrfB_Zn_ribbon	PF07282.6	gi|557695086|ref|YP_008798140.1|	-	0.14	11.8	2.7	0.29	10.8	1.1	2.0	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
DUF2296	PF10058.4	gi|557695086|ref|YP_008798140.1|	-	0.17	11.6	0.9	18	5.1	0.2	2.3	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-Dof	PF02701.10	gi|557695086|ref|YP_008798140.1|	-	0.21	11.5	1.4	0.36	10.7	1.0	1.3	1	0	0	1	1	1	0	Dof	domain,	zinc	finger
DUF4182	PF13790.1	gi|557695086|ref|YP_008798140.1|	-	2.7	7.8	4.6	3.6	7.4	0.2	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4182)
AMMECR1	PF01871.12	gi|557695087|ref|YP_008798141.1|	-	8e-54	181.3	0.0	1e-53	180.9	0.0	1.1	1	0	0	1	1	1	1	AMMECR1
Glyco_trans_1_3	PF13528.1	gi|557695088|ref|YP_008798142.1|	-	6.3e-29	101.1	0.0	1.8e-28	99.6	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	1
Glyco_tran_28_C	PF04101.11	gi|557695088|ref|YP_008798142.1|	-	4.8e-16	58.8	0.0	1.1e-14	54.4	0.0	2.1	2	0	0	2	2	2	1	Glycosyltransferase	family	28	C-terminal	domain
UDPGT	PF00201.13	gi|557695088|ref|YP_008798142.1|	-	4e-07	28.9	0.0	1.2e-05	24.1	0.0	2.1	1	1	1	2	2	2	2	UDP-glucoronosyl	and	UDP-glucosyl	transferase
AAA_assoc_C	PF09821.4	gi|557695089|ref|YP_008798143.1|	-	2.2e-19	69.8	0.2	3.1e-19	69.4	0.1	1.2	1	0	0	1	1	1	1	C-terminal	AAA-associated	domain
ABC_tran	PF00005.22	gi|557695090|ref|YP_008798144.1|	-	2e-35	122.0	0.0	2.4e-34	118.5	0.0	2.1	2	1	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|557695090|ref|YP_008798144.1|	-	1.8e-12	47.8	0.6	2.3e-06	27.7	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
MobB	PF03205.9	gi|557695090|ref|YP_008798144.1|	-	0.0064	16.2	0.2	0.021	14.5	0.1	1.9	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_25	PF13481.1	gi|557695090|ref|YP_008798144.1|	-	0.012	15.0	0.1	0.022	14.1	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|557695090|ref|YP_008798144.1|	-	0.013	15.7	0.1	0.27	11.4	0.1	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.1	gi|557695090|ref|YP_008798144.1|	-	0.014	14.4	0.1	1.4	7.8	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_29	PF13555.1	gi|557695090|ref|YP_008798144.1|	-	0.016	14.7	1.6	0.017	14.6	0.1	1.7	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|557695090|ref|YP_008798144.1|	-	0.019	14.9	0.0	0.025	14.5	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_17	PF13207.1	gi|557695090|ref|YP_008798144.1|	-	0.022	15.5	0.5	0.056	14.2	0.2	1.7	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|557695090|ref|YP_008798144.1|	-	0.023	14.3	1.1	0.047	13.3	0.2	1.8	2	0	0	2	2	2	0	NACHT	domain
NB-ARC	PF00931.17	gi|557695090|ref|YP_008798144.1|	-	0.024	13.4	0.3	0.04	12.7	0.2	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_18	PF13238.1	gi|557695090|ref|YP_008798144.1|	-	0.025	14.8	0.0	0.054	13.7	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|557695090|ref|YP_008798144.1|	-	0.03	13.5	0.0	0.04	13.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|557695090|ref|YP_008798144.1|	-	0.03	14.4	0.0	0.06	13.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|557695090|ref|YP_008798144.1|	-	0.059	13.8	0.1	0.13	12.7	0.1	1.6	1	0	0	1	1	1	0	Miro-like	protein
Pox_A32	PF04665.7	gi|557695090|ref|YP_008798144.1|	-	0.11	11.7	0.2	0.2	10.9	0.1	1.4	1	0	0	1	1	1	0	Poxvirus	A32	protein
ABC_ATPase	PF09818.4	gi|557695090|ref|YP_008798144.1|	-	0.11	11.0	0.4	8.4	4.8	0.0	2.7	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_10	PF12846.2	gi|557695090|ref|YP_008798144.1|	-	0.13	11.6	1.5	0.22	10.9	0.6	1.6	2	0	0	2	2	2	0	AAA-like	domain
AAA_19	PF13245.1	gi|557695090|ref|YP_008798144.1|	-	0.14	11.9	0.7	0.93	9.2	0.1	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_23	PF13476.1	gi|557695090|ref|YP_008798144.1|	-	0.15	12.4	0.2	0.22	11.8	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|557695090|ref|YP_008798144.1|	-	0.16	11.5	0.1	0.27	10.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|557695091|ref|YP_008798145.1|	-	5.7e-26	91.1	37.6	2.9e-17	62.8	5.3	3.1	3	1	0	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
polyprenyl_synt	PF00348.12	gi|557695092|ref|YP_008798146.1|	-	6.2e-40	136.6	0.3	9.4e-40	136.0	0.2	1.2	1	0	0	1	1	1	1	Polyprenyl	synthetase
Thioredoxin	PF00085.15	gi|557695093|ref|YP_008798147.1|	-	8.2e-31	105.7	0.0	1.1e-30	105.4	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|557695093|ref|YP_008798147.1|	-	4.3e-10	39.7	0.1	4e-09	36.6	0.1	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|557695093|ref|YP_008798147.1|	-	1.1e-08	35.0	0.0	1.7e-06	28.0	0.0	2.3	1	1	1	2	2	2	1	Thioredoxin-like
Redoxin	PF08534.5	gi|557695093|ref|YP_008798147.1|	-	7.7e-05	22.2	0.1	0.00081	18.9	0.0	2.0	1	1	1	2	2	2	1	Redoxin
Thioredoxin_7	PF13899.1	gi|557695093|ref|YP_008798147.1|	-	0.00014	21.7	0.0	0.00021	21.2	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_3	PF13192.1	gi|557695093|ref|YP_008798147.1|	-	0.00027	20.6	0.0	0.00047	19.9	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin	domain
AhpC-TSA	PF00578.16	gi|557695093|ref|YP_008798147.1|	-	0.00062	19.4	0.0	0.0033	17.0	0.0	1.9	1	1	1	2	2	2	1	AhpC/TSA	family
HyaE	PF07449.6	gi|557695093|ref|YP_008798147.1|	-	0.00095	19.0	0.0	0.0019	18.0	0.0	1.5	1	1	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_9	PF14595.1	gi|557695093|ref|YP_008798147.1|	-	0.0034	16.9	0.0	0.0039	16.7	0.0	1.4	1	1	0	1	1	1	1	Thioredoxin
DSBA	PF01323.15	gi|557695093|ref|YP_008798147.1|	-	0.015	14.9	0.4	0.12	11.9	0.0	2.1	1	1	1	2	2	2	0	DSBA-like	thioredoxin	domain
DUF953	PF06110.6	gi|557695093|ref|YP_008798147.1|	-	0.021	14.2	0.1	0.12	11.7	0.1	2.1	1	1	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF953)
TraF	PF13728.1	gi|557695093|ref|YP_008798147.1|	-	0.055	12.9	0.0	0.15	11.4	0.0	1.8	1	1	0	2	2	2	0	F	plasmid	transfer	operon	protein
PhzC-PhzF	PF02567.11	gi|557695093|ref|YP_008798147.1|	-	0.13	11.4	0.0	0.18	10.9	0.0	1.2	1	0	0	1	1	1	0	Phenazine	biosynthesis-like	protein
Thioredoxin_4	PF13462.1	gi|557695093|ref|YP_008798147.1|	-	0.15	12.0	0.1	0.69	9.9	0.0	1.9	1	1	1	2	2	2	0	Thioredoxin
Aminotran_1_2	PF00155.16	gi|557695095|ref|YP_008798149.1|	-	2e-45	155.3	0.0	2.6e-45	154.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|557695095|ref|YP_008798149.1|	-	2.7e-08	32.9	0.0	3.6e-07	29.2	0.0	2.1	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|557695095|ref|YP_008798149.1|	-	2e-07	29.6	0.0	3.7e-07	28.7	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.8	gi|557695095|ref|YP_008798149.1|	-	0.00029	19.6	0.0	0.00091	17.9	0.0	1.7	2	0	0	2	2	2	1	Allinase
DUF302	PF03625.9	gi|557695095|ref|YP_008798149.1|	-	0.036	13.6	0.0	0.11	12.1	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF302
Aminotran_MocR	PF12897.2	gi|557695095|ref|YP_008798149.1|	-	0.051	12.1	0.0	0.088	11.3	0.0	1.4	1	1	0	1	1	1	0	Alanine-glyoxylate	amino-transferase
TFIIE_alpha	PF02002.12	gi|557695096|ref|YP_008798150.1|	-	2.2e-18	65.7	0.4	3e-18	65.2	0.3	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
TrmB	PF01978.14	gi|557695096|ref|YP_008798150.1|	-	0.0022	17.6	0.3	0.019	14.6	0.0	2.1	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Acetyltransf_6	PF13480.1	gi|557695096|ref|YP_008798150.1|	-	0.0057	16.6	0.1	0.0097	15.8	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
IBR	PF01485.16	gi|557695096|ref|YP_008798150.1|	-	0.015	15.1	0.2	0.022	14.5	0.1	1.3	1	0	0	1	1	1	0	IBR	domain
HTH_9	PF08221.6	gi|557695096|ref|YP_008798150.1|	-	0.023	14.5	0.0	0.039	13.8	0.0	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
DUF61	PF01886.11	gi|557695096|ref|YP_008798150.1|	-	0.1	12.4	0.4	0.32	10.8	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF61
zf-C3HC	PF07967.8	gi|557695096|ref|YP_008798150.1|	-	0.13	12.0	0.1	0.24	11.1	0.0	1.5	1	1	0	1	1	1	0	C3HC	zinc	finger-like
Sigma70_r3	PF04539.11	gi|557695096|ref|YP_008798150.1|	-	0.19	11.6	0.5	0.35	10.7	0.0	1.6	2	0	0	2	2	2	0	Sigma-70	region	3
Trm56	PF01994.11	gi|557695097|ref|YP_008798151.1|	-	1.1e-44	151.1	0.1	1.5e-44	150.6	0.1	1.2	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
V_ATPase_I	PF01496.14	gi|557695098|ref|YP_008798152.1|	-	8.4e-52	176.0	4.6	1.3e-39	135.7	0.0	2.1	2	0	0	2	2	2	2	V-type	ATPase	116kDa	subunit	family
DUF374	PF04028.8	gi|557695098|ref|YP_008798152.1|	-	0.017	14.3	0.0	0.043	13.0	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF374)
TMF_TATA_bd	PF12325.3	gi|557695098|ref|YP_008798152.1|	-	0.021	14.5	1.6	2.7	7.7	0.2	2.4	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
AAA_13	PF13166.1	gi|557695098|ref|YP_008798152.1|	-	0.025	13.0	0.3	0.036	12.5	0.2	1.1	1	0	0	1	1	1	0	AAA	domain
MutS_III	PF05192.13	gi|557695098|ref|YP_008798152.1|	-	0.073	12.8	0.4	0.13	12.0	0.3	1.5	1	0	0	1	1	1	0	MutS	domain	III
DUF4140	PF13600.1	gi|557695098|ref|YP_008798152.1|	-	0.12	12.8	0.3	1.3	9.5	0.0	2.6	3	0	0	3	3	3	0	N-terminal	domain	of	unknown	function	(DUF4140)
Glycoprotein_B	PF00606.13	gi|557695098|ref|YP_008798152.1|	-	2.9	5.7	4.8	4.4	5.2	3.3	1.1	1	0	0	1	1	1	0	Herpesvirus	Glycoprotein	B
Oxidored_q3	PF00499.15	gi|557695099|ref|YP_008798153.1|	-	3.1e-07	30.2	10.7	3.1e-07	30.2	7.4	1.4	1	1	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
DUF4040	PF13244.1	gi|557695099|ref|YP_008798153.1|	-	4.2e-05	23.4	12.9	4.7e-05	23.2	9.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4040)
CTP_transf_1	PF01148.15	gi|557695099|ref|YP_008798153.1|	-	0.32	10.5	6.8	0.36	10.4	4.7	1.0	1	0	0	1	1	1	0	Cytidylyltransferase	family
MerC	PF03203.9	gi|557695099|ref|YP_008798153.1|	-	1.2	9.4	7.7	1.5	9.1	5.4	1.1	1	0	0	1	1	1	0	MerC	mercury	resistance	protein
Bax1-I	PF01027.15	gi|557695099|ref|YP_008798153.1|	-	2.6	7.6	13.0	3	7.4	9.0	1.0	1	0	0	1	1	1	0	Inhibitor	of	apoptosis-promoting	Bax1
Herpes_LMP2	PF07415.6	gi|557695099|ref|YP_008798153.1|	-	3.4	6.1	8.7	3.7	6.0	6.0	1.0	1	0	0	1	1	1	0	Gammaherpesvirus	latent	membrane	protein	(LMP2)	protein
Glucos_trans_II	PF14264.1	gi|557695099|ref|YP_008798153.1|	-	7.5	5.4	12.5	8.5	5.2	8.7	1.0	1	0	0	1	1	1	0	Glucosyl	transferase	GtrII
DUF2029	PF09594.5	gi|557695100|ref|YP_008798154.1|	-	0.0043	16.5	2.9	0.0046	16.5	2.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2029)
DUF1469	PF07332.6	gi|557695100|ref|YP_008798154.1|	-	0.7	9.6	4.3	1.8	8.3	0.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1469)
Oxidored_q2	PF00420.19	gi|557695101|ref|YP_008798155.1|	-	5.5e-21	73.9	4.2	6.3e-21	73.7	2.9	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
Sec61_beta	PF03911.11	gi|557695101|ref|YP_008798155.1|	-	6.1	6.7	9.0	15	5.4	0.2	2.5	2	0	0	2	2	2	0	Sec61beta	family
GDE_N	PF12439.3	gi|557695102|ref|YP_008798156.1|	-	0.048	12.8	0.0	0.052	12.7	0.0	1.2	1	0	0	1	1	1	0	Glycogen	debranching	enzyme	N	terminal
Metallophos_2	PF12850.2	gi|557695103|ref|YP_008798157.1|	-	1e-17	64.4	0.1	1.4e-17	63.9	0.1	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|557695103|ref|YP_008798157.1|	-	9e-10	38.2	2.1	2.3e-09	36.9	1.5	1.7	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
CoA_binding_2	PF13380.1	gi|557695104|ref|YP_008798158.1|	-	9e-38	129.0	0.2	1.1e-37	128.7	0.2	1.1	1	0	0	1	1	1	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|557695104|ref|YP_008798158.1|	-	3.8e-08	33.7	0.0	7e-08	32.8	0.0	1.4	2	0	0	2	2	2	1	CoA	binding	domain
Radical_SAM	PF04055.16	gi|557695105|ref|YP_008798159.1|	-	3e-09	37.2	0.0	5e-09	36.5	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
UPF0547	PF10571.4	gi|557695105|ref|YP_008798159.1|	-	0.0011	18.5	0.5	0.0034	17.0	0.4	1.9	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|557695105|ref|YP_008798159.1|	-	0.0022	17.1	1.4	0.0022	17.1	1.0	2.6	3	1	0	3	3	3	1	zinc-ribbon	domain
Fer4_12	PF13353.1	gi|557695105|ref|YP_008798159.1|	-	0.0023	18.0	0.0	0.0041	17.2	0.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
DZR	PF12773.2	gi|557695105|ref|YP_008798159.1|	-	0.026	14.3	0.1	0.026	14.3	0.1	2.9	3	0	0	3	3	3	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|557695105|ref|YP_008798159.1|	-	0.39	10.2	6.7	2.5	7.6	0.0	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
Thy1	PF02511.10	gi|557695107|ref|YP_008798161.1|	-	2.6e-35	121.5	0.0	2.4e-18	66.1	0.0	2.1	2	0	0	2	2	2	2	Thymidylate	synthase	complementing	protein
MerR_1	PF13411.1	gi|557695107|ref|YP_008798161.1|	-	0.11	12.2	0.0	21	4.9	0.0	2.5	2	0	0	2	2	2	0	MerR	HTH	family	regulatory	protein
PTPS	PF01242.14	gi|557695108|ref|YP_008798162.1|	-	9.9e-24	83.3	0.0	1.4e-23	82.9	0.0	1.1	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
QueC	PF06508.8	gi|557695109|ref|YP_008798163.1|	-	1.2e-39	135.8	0.0	1.3e-39	135.6	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|557695109|ref|YP_008798163.1|	-	1.8e-07	30.8	0.0	4.1e-07	29.6	0.0	1.6	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|557695109|ref|YP_008798163.1|	-	0.00012	20.7	0.0	0.00016	20.3	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
ATP_bind_3	PF01171.15	gi|557695109|ref|YP_008798163.1|	-	0.021	14.3	0.0	0.13	11.7	0.0	2.0	2	1	0	2	2	2	0	PP-loop	family
Asn_synthase	PF00733.16	gi|557695109|ref|YP_008798163.1|	-	0.024	14.1	0.0	0.031	13.7	0.0	1.2	1	0	0	1	1	1	0	Asparagine	synthase
NAD_kinase	PF01513.16	gi|557695110|ref|YP_008798164.1|	-	3.9e-41	140.7	0.4	4.4e-41	140.5	0.3	1.1	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|557695110|ref|YP_008798164.1|	-	0.048	13.0	0.0	0.096	12.1	0.0	1.5	1	0	0	1	1	1	0	Diacylglycerol	kinase	catalytic	domain
NOB1_Zn_bind	PF08772.6	gi|557695111|ref|YP_008798165.1|	-	0.0015	18.2	0.7	0.0027	17.4	0.5	1.4	1	0	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
Zn-ribbon_8	PF09723.5	gi|557695111|ref|YP_008798165.1|	-	0.02	14.8	2.4	0.26	11.2	1.7	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-C2H2	PF00096.21	gi|557695111|ref|YP_008798165.1|	-	0.039	14.3	1.5	0.24	11.8	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
PIN_4	PF13638.1	gi|557695111|ref|YP_008798165.1|	-	0.087	12.9	0.0	0.56	10.3	0.0	2.0	2	0	0	2	2	2	0	PIN	domain
UPF0278	PF08745.6	gi|557695111|ref|YP_008798165.1|	-	0.14	11.4	1.5	1.2	8.2	0.2	2.1	1	1	0	2	2	2	0	UPF0278	family
DUF998	PF06197.8	gi|557695112|ref|YP_008798166.1|	-	3.3e-20	72.1	29.7	4e-20	71.9	20.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
Dicty_CAR	PF05462.6	gi|557695112|ref|YP_008798166.1|	-	0.016	14.0	0.8	0.022	13.6	0.5	1.3	1	0	0	1	1	1	0	Slime	mold	cyclic	AMP	receptor
MerC	PF03203.9	gi|557695112|ref|YP_008798166.1|	-	3.7	7.9	13.3	1.3	9.3	6.7	2.1	1	1	1	2	2	2	0	MerC	mercury	resistance	protein
Abi	PF02517.11	gi|557695113|ref|YP_008798167.1|	-	2.8	8.1	13.6	4.3	7.5	5.8	2.9	1	1	0	2	2	2	0	CAAX	protease	self-immunity
CopD	PF05425.8	gi|557695114|ref|YP_008798168.1|	-	0.0012	19.0	6.2	0.0012	19.0	4.3	1.6	2	0	0	2	2	2	1	Copper	resistance	protein	D
DUF4149	PF13664.1	gi|557695114|ref|YP_008798168.1|	-	0.0025	17.8	0.6	0.0037	17.2	0.4	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4149)
GATase	PF00117.23	gi|557695115|ref|YP_008798169.1|	-	3.2e-39	134.3	0.0	4.7e-39	133.8	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GMP_synt_C	PF00958.17	gi|557695115|ref|YP_008798169.1|	-	1.9e-30	104.4	0.0	4e-30	103.3	0.0	1.6	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.12	gi|557695115|ref|YP_008798169.1|	-	4.5e-09	35.5	0.1	0.00053	18.9	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
Peptidase_C26	PF07722.8	gi|557695115|ref|YP_008798169.1|	-	6.3e-09	35.5	0.0	2e-08	33.9	0.0	1.9	1	1	0	1	1	1	1	Peptidase	C26
tRNA_Me_trans	PF03054.11	gi|557695115|ref|YP_008798169.1|	-	0.00047	18.8	0.0	0.028	13.0	0.0	2.1	2	0	0	2	2	2	1	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|557695115|ref|YP_008798169.1|	-	0.00088	18.8	0.0	0.0014	18.1	0.0	1.3	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.8	gi|557695115|ref|YP_008798169.1|	-	0.0021	17.4	0.0	0.04	13.2	0.0	2.2	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|557695115|ref|YP_008798169.1|	-	0.0029	17.1	0.0	0.009	15.4	0.0	1.7	2	0	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
ATP_bind_3	PF01171.15	gi|557695115|ref|YP_008798169.1|	-	0.0038	16.7	0.0	0.026	14.0	0.0	2.0	2	0	0	2	2	2	1	PP-loop	family
DUF2392	PF10288.4	gi|557695115|ref|YP_008798169.1|	-	0.1	12.9	0.0	0.21	11.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2392)
ECH	PF00378.15	gi|557695116|ref|YP_008798170.1|	-	1.2e-71	240.7	0.8	1.4e-71	240.4	0.6	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Peptidase_S49	PF01343.13	gi|557695116|ref|YP_008798170.1|	-	0.00085	19.1	0.0	0.0019	17.9	0.0	1.6	1	0	0	1	1	1	1	Peptidase	family	S49
ECH_C	PF13766.1	gi|557695116|ref|YP_008798170.1|	-	0.0014	18.7	0.8	0.0026	17.9	0.1	1.7	2	0	0	2	2	2	1	2-enoyl-CoA	Hydratase	C-terminal	region
SDH_sah	PF01972.11	gi|557695116|ref|YP_008798170.1|	-	0.0031	16.3	0.0	0.0082	14.9	0.0	1.6	1	1	1	2	2	2	1	Serine	dehydrogenase	proteinase
SeleniumBinding	PF11524.3	gi|557695116|ref|YP_008798170.1|	-	0.046	13.8	0.0	0.088	12.9	0.0	1.4	1	0	0	1	1	1	0	Selenium	binding	protein
FleQ	PF06490.6	gi|557695116|ref|YP_008798170.1|	-	0.15	12.2	0.0	2.2	8.4	0.0	2.3	2	1	0	2	2	2	0	Flagellar	regulatory	protein	FleQ
GlutR_dimer	PF00745.15	gi|557695116|ref|YP_008798170.1|	-	0.36	10.8	3.2	0.34	10.8	0.2	2.2	2	0	0	2	2	2	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
DUF3565	PF12088.3	gi|557695117|ref|YP_008798171.1|	-	0.13	12.0	0.0	0.3	10.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3565)
AdoMet_dc	PF02675.10	gi|557695118|ref|YP_008798172.1|	-	5.5e-35	119.4	0.0	7e-35	119.1	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
Spermine_synth	PF01564.12	gi|557695119|ref|YP_008798173.1|	-	5.9e-60	202.2	0.0	7.7e-60	201.8	0.0	1.1	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_26	PF13659.1	gi|557695119|ref|YP_008798173.1|	-	0.00086	19.3	0.0	0.0015	18.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_30	PF05430.6	gi|557695119|ref|YP_008798173.1|	-	0.02	14.5	0.0	0.038	13.6	0.0	1.4	1	0	0	1	1	1	0	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_18	PF12847.2	gi|557695119|ref|YP_008798173.1|	-	0.067	13.7	0.0	0.098	13.2	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
BPD_transp_1	PF00528.17	gi|557695120|ref|YP_008798174.1|	-	9.6e-18	64.3	19.1	1.4e-17	63.8	13.2	1.3	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|557695121|ref|YP_008798175.1|	-	1e-29	103.5	0.0	1.4e-29	103.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557695121|ref|YP_008798175.1|	-	3.6e-06	27.1	0.0	0.028	14.4	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|557695121|ref|YP_008798175.1|	-	0.00018	20.9	0.3	0.00034	20.0	0.2	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|557695121|ref|YP_008798175.1|	-	0.0018	17.6	0.1	0.03	13.7	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|557695121|ref|YP_008798175.1|	-	0.0035	17.4	1.5	0.034	14.3	1.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|557695121|ref|YP_008798175.1|	-	0.0036	17.3	0.2	0.01	15.8	0.1	1.7	2	0	0	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|557695121|ref|YP_008798175.1|	-	0.0042	16.3	0.1	0.24	10.5	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|557695121|ref|YP_008798175.1|	-	0.0061	15.7	0.0	0.0098	15.0	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_15	PF13175.1	gi|557695121|ref|YP_008798175.1|	-	0.0074	15.3	0.0	2.6	6.9	0.0	2.0	2	0	0	2	2	2	2	AAA	ATPase	domain
MobB	PF03205.9	gi|557695121|ref|YP_008798175.1|	-	0.0078	15.9	0.4	0.017	14.8	0.1	1.6	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_23	PF13476.1	gi|557695121|ref|YP_008798175.1|	-	0.0083	16.4	0.1	0.012	15.9	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|557695121|ref|YP_008798175.1|	-	0.017	14.8	1.0	0.032	13.9	0.2	1.8	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_17	PF13207.1	gi|557695121|ref|YP_008798175.1|	-	0.027	15.2	1.2	0.038	14.8	0.8	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|557695121|ref|YP_008798175.1|	-	0.033	14.4	0.2	0.058	13.7	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|557695121|ref|YP_008798175.1|	-	0.042	13.4	0.1	0.092	12.3	0.1	1.5	1	0	0	1	1	1	0	NACHT	domain
PduV-EutP	PF10662.4	gi|557695121|ref|YP_008798175.1|	-	0.057	12.9	0.2	0.12	11.8	0.1	1.4	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
cobW	PF02492.14	gi|557695121|ref|YP_008798175.1|	-	0.076	12.4	1.1	0.097	12.1	0.2	1.6	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
T2SE	PF00437.15	gi|557695121|ref|YP_008798175.1|	-	0.076	11.8	0.3	0.16	10.8	0.0	1.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
FtsK_SpoIIIE	PF01580.13	gi|557695121|ref|YP_008798175.1|	-	0.1	12.0	0.3	0.35	10.3	0.0	1.8	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
Miro	PF08477.8	gi|557695121|ref|YP_008798175.1|	-	0.14	12.6	0.2	0.35	11.3	0.1	1.7	2	0	0	2	2	2	0	Miro-like	protein
Phosphonate-bd	PF12974.2	gi|557695122|ref|YP_008798176.1|	-	3.7e-51	173.8	0.1	4.6e-51	173.5	0.1	1.0	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_3	PF00497.15	gi|557695122|ref|YP_008798176.1|	-	1.2e-05	24.7	0.0	0.002	17.4	0.0	2.2	1	1	1	2	2	2	2	Bacterial	extracellular	solute-binding	proteins,	family	3
NMT1	PF09084.6	gi|557695122|ref|YP_008798176.1|	-	0.00013	21.6	0.0	0.0015	18.2	0.0	2.6	1	1	0	1	1	1	1	NMT1/THI5	like
LysR_substrate	PF03466.15	gi|557695122|ref|YP_008798176.1|	-	0.0011	18.0	0.0	1	8.4	0.0	2.5	2	0	0	2	2	2	2	LysR	substrate	binding	domain
NIF3	PF01784.13	gi|557695122|ref|YP_008798176.1|	-	0.0077	15.8	0.0	0.012	15.2	0.0	1.4	1	0	0	1	1	1	1	NIF3	(NGG1p	interacting	factor	3)
SBP_bac_11	PF13531.1	gi|557695122|ref|YP_008798176.1|	-	0.013	15.1	0.3	0.016	14.8	0.2	1.2	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	protein
RsbRD_N	PF14361.1	gi|557695122|ref|YP_008798176.1|	-	0.076	13.4	0.0	0.15	12.5	0.0	1.5	1	0	0	1	1	1	0	RsbT	co-antagonist	protein	rsbRD	N-terminal	domain
HTH_3	PF01381.17	gi|557695123|ref|YP_008798177.1|	-	2.2e-05	24.2	0.1	0.0054	16.5	0.0	2.8	2	0	0	2	2	2	1	Helix-turn-helix
Rubrerythrin	PF02915.12	gi|557695123|ref|YP_008798177.1|	-	0.00037	20.8	4.8	0.00057	20.2	1.5	2.4	2	1	1	3	3	2	1	Rubrerythrin
Ferritin_2	PF13668.1	gi|557695123|ref|YP_008798177.1|	-	0.00054	19.9	0.3	0.0011	18.9	0.2	1.6	1	1	0	1	1	1	1	Ferritin-like	domain
Neuralized	PF07177.7	gi|557695123|ref|YP_008798177.1|	-	0.017	14.9	0.0	0.11	12.4	0.0	2.0	2	0	0	2	2	2	0	Neuralized
DUF1840	PF08895.6	gi|557695123|ref|YP_008798177.1|	-	0.017	15.1	0.3	0.062	13.3	0.1	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1840)
P22_Cro	PF14549.1	gi|557695123|ref|YP_008798177.1|	-	0.019	14.6	0.0	0.19	11.4	0.0	2.4	1	1	1	2	2	2	0	DNA-binding	transcriptional	regulator	Cro
Activator-TraM	PF11657.3	gi|557695123|ref|YP_008798177.1|	-	0.031	13.7	1.4	0.045	13.2	0.3	1.8	2	0	0	2	2	2	0	Transcriptional	activator	TraM
Phenol_Hydrox	PF02332.13	gi|557695123|ref|YP_008798177.1|	-	0.076	12.3	0.2	0.38	10.0	0.0	2.2	2	2	0	2	2	2	0	Methane/Phenol/Toluene	Hydroxylase
HTH_23	PF13384.1	gi|557695123|ref|YP_008798177.1|	-	0.09	12.4	0.5	0.26	11.0	0.0	2.0	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_31	PF13560.1	gi|557695123|ref|YP_008798177.1|	-	0.16	12.2	0.3	0.16	12.2	0.2	3.4	2	1	2	4	4	4	0	Helix-turn-helix	domain
RNA_pol_Rpb4	PF03874.11	gi|557695123|ref|YP_008798177.1|	-	0.26	11.3	1.9	8.8	6.3	0.0	3.1	2	1	0	2	2	2	0	RNA	polymerase	Rpb4
MarR_2	PF12802.2	gi|557695123|ref|YP_008798177.1|	-	0.33	10.6	1.9	0.84	9.3	0.1	2.6	3	1	1	4	4	4	0	MarR	family
ABC-3	PF00950.12	gi|557695124|ref|YP_008798178.1|	-	1.4e-75	253.9	38.5	1.6e-75	253.7	26.7	1.0	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.13	gi|557695124|ref|YP_008798178.1|	-	0.099	11.4	39.1	0.062	12.1	25.6	1.6	1	1	1	2	2	2	0	FecCD	transport	family
ABC_tran	PF00005.22	gi|557695125|ref|YP_008798179.1|	-	3.9e-32	111.3	0.0	5.8e-32	110.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557695125|ref|YP_008798179.1|	-	1.1e-15	58.4	0.1	1.4e-06	28.4	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|557695125|ref|YP_008798179.1|	-	7.2e-08	31.9	0.5	0.00012	21.3	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|557695125|ref|YP_008798179.1|	-	2.6e-06	26.8	0.0	5e-06	25.9	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|557695125|ref|YP_008798179.1|	-	7.1e-06	26.4	0.2	1.5e-05	25.4	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|557695125|ref|YP_008798179.1|	-	1.7e-05	24.1	0.0	0.084	11.9	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_10	PF12846.2	gi|557695125|ref|YP_008798179.1|	-	3e-05	23.6	0.2	0.0028	17.1	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
AAA_16	PF13191.1	gi|557695125|ref|YP_008798179.1|	-	0.0003	20.8	0.3	0.0014	18.6	0.2	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_33	PF13671.1	gi|557695125|ref|YP_008798179.1|	-	0.0011	18.8	0.1	0.005	16.7	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|557695125|ref|YP_008798179.1|	-	0.0021	17.9	0.9	0.032	14.1	0.6	2.2	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
MobB	PF03205.9	gi|557695125|ref|YP_008798179.1|	-	0.0028	17.3	0.0	0.0053	16.4	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|557695125|ref|YP_008798179.1|	-	0.0029	17.7	0.0	0.13	12.5	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|557695125|ref|YP_008798179.1|	-	0.0038	16.4	0.0	0.0063	15.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ABC_ATPase	PF09818.4	gi|557695125|ref|YP_008798179.1|	-	0.0041	15.7	0.1	0.033	12.7	0.0	2.0	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
MMR_HSR1	PF01926.18	gi|557695125|ref|YP_008798179.1|	-	0.0055	16.6	0.0	0.0084	16.0	0.0	1.5	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
ATP_bind_1	PF03029.12	gi|557695125|ref|YP_008798179.1|	-	0.0055	16.2	0.1	0.063	12.8	0.0	2.0	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
AAA_25	PF13481.1	gi|557695125|ref|YP_008798179.1|	-	0.0064	15.9	0.0	0.018	14.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|557695125|ref|YP_008798179.1|	-	0.0095	16.7	0.6	0.031	15.1	0.4	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|557695125|ref|YP_008798179.1|	-	0.019	15.1	0.5	0.051	13.7	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|557695125|ref|YP_008798179.1|	-	0.02	14.7	0.3	0.68	9.8	0.0	2.6	2	1	1	3	3	3	0	AAA	domain
Zot	PF05707.7	gi|557695125|ref|YP_008798179.1|	-	0.021	14.3	0.1	0.24	10.8	0.1	2.0	1	1	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
Hydrolase	PF00702.21	gi|557695125|ref|YP_008798179.1|	-	0.027	14.8	0.0	0.035	14.4	0.0	1.3	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Arch_ATPase	PF01637.13	gi|557695125|ref|YP_008798179.1|	-	0.043	13.5	0.1	0.19	11.4	0.0	1.9	2	0	0	2	2	2	0	Archaeal	ATPase
AAA_18	PF13238.1	gi|557695125|ref|YP_008798179.1|	-	0.046	14.0	0.0	1.2	9.5	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|557695125|ref|YP_008798179.1|	-	0.061	12.8	0.1	2	7.8	0.0	2.1	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NACHT	PF05729.7	gi|557695125|ref|YP_008798179.1|	-	0.068	12.8	0.1	0.13	11.9	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
T2SE	PF00437.15	gi|557695125|ref|YP_008798179.1|	-	0.075	11.9	0.1	0.15	10.9	0.1	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|557695125|ref|YP_008798179.1|	-	0.093	12.4	0.1	0.29	10.9	0.1	1.8	1	0	0	1	1	1	0	Part	of	AAA	domain
Miro	PF08477.8	gi|557695125|ref|YP_008798179.1|	-	0.13	12.7	0.0	0.25	11.8	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
Dynamin_N	PF00350.18	gi|557695125|ref|YP_008798179.1|	-	0.15	11.9	0.1	0.34	10.7	0.1	1.6	2	0	0	2	2	2	0	Dynamin	family
TroA	PF01297.12	gi|557695126|ref|YP_008798180.1|	-	9.6e-70	234.7	0.0	1.2e-69	234.4	0.0	1.0	1	0	0	1	1	1	1	Periplasmic	solute	binding	protein	family
Toprim_4	PF13662.1	gi|557695127|ref|YP_008798181.1|	-	1.4e-10	41.0	0.1	3.7e-10	39.6	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|557695127|ref|YP_008798181.1|	-	5.3e-06	26.3	0.1	3.3e-05	23.7	0.1	2.4	1	1	0	1	1	1	1	Toprim	domain
Toprim_2	PF13155.1	gi|557695127|ref|YP_008798181.1|	-	0.026	14.8	0.0	0.063	13.6	0.0	1.7	1	0	0	1	1	1	0	Toprim-like
YxiJ	PF14176.1	gi|557695127|ref|YP_008798181.1|	-	0.035	14.2	0.0	0.064	13.3	0.0	1.3	1	0	0	1	1	1	0	YxiJ-like	protein
Aldedh	PF00171.17	gi|557695127|ref|YP_008798181.1|	-	0.1	10.9	0.1	0.3	9.3	0.0	1.8	2	0	0	2	2	2	0	Aldehyde	dehydrogenase	family
eRF1_3	PF03465.10	gi|557695128|ref|YP_008798182.1|	-	1.3e-17	64.0	0.0	3.2e-17	62.7	0.0	1.7	1	0	0	1	1	1	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|557695128|ref|YP_008798182.1|	-	2.5e-13	49.7	0.9	3.8e-13	49.1	0.2	1.6	2	0	0	2	2	2	1	eRF1	domain	1
eRF1_2	PF03464.10	gi|557695128|ref|YP_008798182.1|	-	9.8e-05	22.6	0.1	0.00035	20.9	0.0	2.0	1	1	1	2	2	2	1	eRF1	domain	2
DUF1242	PF06842.7	gi|557695128|ref|YP_008798182.1|	-	0.16	11.4	0.0	0.35	10.3	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1242)
Asp_Glu_race	PF01177.17	gi|557695129|ref|YP_008798183.1|	-	5.8e-30	104.8	0.0	7.1e-30	104.5	0.0	1.1	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
ThiF	PF00899.16	gi|557695129|ref|YP_008798183.1|	-	0.037	13.8	0.0	0.1	12.4	0.0	1.6	2	0	0	2	2	2	0	ThiF	family
Hydantoinase_A	PF01968.13	gi|557695130|ref|YP_008798184.1|	-	5.6e-86	288.2	11.0	7e-86	287.9	3.0	2.6	3	0	0	3	3	3	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|557695130|ref|YP_008798184.1|	-	3.8e-46	156.7	0.0	1e-45	155.3	0.0	1.8	1	0	0	1	1	1	1	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.1	gi|557695130|ref|YP_008798184.1|	-	0.024	12.9	0.5	0.87	7.8	0.0	2.3	2	0	0	2	2	2	0	MutL	protein
Hydantoinase_B	PF02538.9	gi|557695131|ref|YP_008798185.1|	-	4.8e-164	546.4	0.0	5.6e-164	546.2	0.0	1.0	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
Methyltransf_16	PF10294.4	gi|557695131|ref|YP_008798185.1|	-	0.14	11.5	0.0	0.25	10.7	0.0	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
Ribosomal_S7	PF00177.16	gi|557695132|ref|YP_008798186.1|	-	9.4e-41	138.8	0.5	1.1e-40	138.6	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
PEPcase_2	PF14010.1	gi|557695133|ref|YP_008798187.1|	-	8.1e-156	519.1	0.0	9.1e-156	518.9	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxylase
UPF0147	PF03685.8	gi|557695133|ref|YP_008798187.1|	-	0.027	14.3	0.3	0.24	11.2	0.0	2.5	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0147)
DUF433	PF04255.9	gi|557695133|ref|YP_008798187.1|	-	0.076	12.4	0.2	4.3	6.8	0.0	3.2	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF433)
PEPcase	PF00311.12	gi|557695133|ref|YP_008798187.1|	-	0.11	10.3	0.0	0.16	9.7	0.0	1.4	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxylase
BPD_transp_2	PF02653.11	gi|557695134|ref|YP_008798188.1|	-	2.6e-35	121.6	37.9	3.6e-35	121.2	26.3	1.2	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
BPD_transp_2	PF02653.11	gi|557695135|ref|YP_008798189.1|	-	1.1e-32	113.0	31.4	1.1e-32	113.0	21.7	1.5	2	0	0	2	2	2	1	Branched-chain	amino	acid	transport	system	/	permease	component
NDUF_B12	PF08122.7	gi|557695135|ref|YP_008798189.1|	-	0.065	12.9	0.1	0.065	12.9	0.1	2.8	3	0	0	3	3	3	0	NADH-ubiquinone	oxidoreductase	B12	subunit	family
ABC_tran	PF00005.22	gi|557695136|ref|YP_008798190.1|	-	1.1e-51	174.7	0.0	2.2e-31	108.9	0.0	2.2	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|557695136|ref|YP_008798190.1|	-	1.6e-07	31.5	0.0	1.4e-05	25.2	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|557695136|ref|YP_008798190.1|	-	2.6e-05	23.4	0.1	0.0024	17.0	0.0	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|557695136|ref|YP_008798190.1|	-	0.00013	21.4	0.0	0.0017	17.8	0.0	2.5	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|557695136|ref|YP_008798190.1|	-	0.00023	20.6	0.0	0.76	9.1	0.0	2.5	3	0	0	3	3	3	2	AAA-like	domain
SMC_N	PF02463.14	gi|557695136|ref|YP_008798190.1|	-	0.0026	17.0	1.0	1.4	8.0	0.0	2.6	3	0	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|557695136|ref|YP_008798190.1|	-	0.0046	17.1	0.2	11	6.1	0.0	3.9	4	0	0	4	4	4	1	AAA	domain
AAA_23	PF13476.1	gi|557695136|ref|YP_008798190.1|	-	0.016	15.5	0.0	0.035	14.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|557695136|ref|YP_008798190.1|	-	0.058	12.7	0.0	0.27	10.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
ABC_ATPase	PF09818.4	gi|557695136|ref|YP_008798190.1|	-	0.064	11.8	3.7	3.4	6.1	0.1	3.6	4	1	0	4	4	4	0	Predicted	ATPase	of	the	ABC	class
AAA_15	PF13175.1	gi|557695136|ref|YP_008798190.1|	-	0.065	12.2	0.1	0.65	8.9	0.0	2.4	3	0	0	3	3	3	0	AAA	ATPase	domain
MMR_HSR1	PF01926.18	gi|557695136|ref|YP_008798190.1|	-	0.076	12.9	0.7	0.26	11.2	0.2	2.3	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_16	PF13191.1	gi|557695136|ref|YP_008798190.1|	-	0.15	12.0	2.0	0.62	10.0	0.0	2.8	2	2	0	2	2	2	0	AAA	ATPase	domain
Bmp	PF02608.9	gi|557695137|ref|YP_008798191.1|	-	8.4e-33	113.4	0.6	8.4e-33	113.4	0.4	1.6	2	0	0	2	2	2	1	Basic	membrane	protein
SpoVAD	PF07451.6	gi|557695137|ref|YP_008798191.1|	-	0.0017	16.8	0.2	0.0032	15.9	0.2	1.4	1	0	0	1	1	1	1	Stage	V	sporulation	protein	AD	(SpoVAD)
UCR_Fe-S_N	PF10399.4	gi|557695137|ref|YP_008798191.1|	-	0.0018	17.3	1.3	0.0018	17.3	0.9	2.2	2	0	0	2	2	2	1	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
CytB6-F_Fe-S	PF08802.5	gi|557695137|ref|YP_008798191.1|	-	0.025	14.5	1.2	0.025	14.5	0.8	2.4	2	0	0	2	2	2	0	Cytochrome	B6-F	complex	Fe-S	subunit
Adenine_deam_C	PF13382.1	gi|557695138|ref|YP_008798192.1|	-	6.7e-64	214.1	0.0	1.2e-63	213.3	0.0	1.4	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.15	gi|557695138|ref|YP_008798192.1|	-	3.2e-23	82.9	0.0	1.6e-21	77.3	0.0	2.2	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|557695138|ref|YP_008798192.1|	-	4.4e-12	46.6	0.9	1e-10	42.1	0.6	2.5	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|557695138|ref|YP_008798192.1|	-	5.1e-10	39.0	0.2	2e-09	37.1	0.2	2.1	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|557695138|ref|YP_008798192.1|	-	8.3e-08	31.8	1.2	3.9e-06	26.3	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
Bac_luciferase	PF00296.15	gi|557695139|ref|YP_008798193.1|	-	1.9e-65	221.0	1.2	2.1e-65	220.8	0.8	1.0	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Amidohydro_1	PF01979.15	gi|557695140|ref|YP_008798194.1|	-	8.6e-53	180.1	0.1	1e-52	179.8	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.6	gi|557695140|ref|YP_008798194.1|	-	4.5e-16	59.0	0.3	3e-12	46.4	0.1	2.4	1	1	1	2	2	2	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|557695140|ref|YP_008798194.1|	-	1.1e-15	58.4	0.0	5.2e-15	56.2	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|557695140|ref|YP_008798194.1|	-	1.5e-11	43.9	0.1	4.3e-11	42.4	0.0	1.9	2	0	0	2	2	2	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|557695140|ref|YP_008798194.1|	-	0.031	13.4	0.0	0.051	12.7	0.0	1.3	1	0	0	1	1	1	0	TatD	related	DNase
FAD_binding_5	PF00941.16	gi|557695141|ref|YP_008798195.1|	-	4.7e-32	110.7	0.1	6.5e-32	110.3	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|557695141|ref|YP_008798195.1|	-	2.4e-09	37.0	0.0	5.1e-09	36.0	0.0	1.6	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Fer2_2	PF01799.15	gi|557695142|ref|YP_008798196.1|	-	2.3e-25	88.2	0.0	5.5e-25	87.0	0.0	1.6	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|557695142|ref|YP_008798196.1|	-	1.3e-06	28.0	0.4	1.3e-06	28.0	0.3	2.0	1	1	1	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|557695142|ref|YP_008798196.1|	-	0.0029	17.4	0.0	0.0047	16.7	0.0	1.4	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|557695142|ref|YP_008798196.1|	-	0.0041	16.8	0.8	0.011	15.5	0.1	2.1	2	1	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Ald_Xan_dh_C2	PF02738.13	gi|557695143|ref|YP_008798197.1|	-	2.1e-147	491.7	0.2	2.8e-147	491.3	0.1	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557695143|ref|YP_008798197.1|	-	9.3e-28	96.5	0.0	2e-27	95.4	0.0	1.6	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
NTP_transf_2	PF01909.18	gi|557695144|ref|YP_008798198.1|	-	1e-10	41.8	0.0	1.3e-10	41.4	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|557695144|ref|YP_008798198.1|	-	0.0086	16.1	0.0	0.0094	15.9	0.0	1.1	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
Pox_A51	PF04948.8	gi|557695144|ref|YP_008798198.1|	-	0.12	11.0	0.0	0.15	10.6	0.0	1.1	1	0	0	1	1	1	0	Poxvirus	A51	protein
OTCace_N	PF02729.16	gi|557695145|ref|YP_008798199.1|	-	4.4e-41	139.8	0.0	6.5e-41	139.3	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|557695145|ref|YP_008798199.1|	-	1.6e-36	125.5	0.0	2.8e-36	124.7	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Methyltransf_31	PF13847.1	gi|557695145|ref|YP_008798199.1|	-	0.11	12.1	0.0	0.46	10.0	0.0	2.0	2	0	0	2	2	2	0	Methyltransferase	domain
AA_kinase	PF00696.23	gi|557695146|ref|YP_008798200.1|	-	7.5e-38	130.4	0.0	8.5e-38	130.2	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
GntR	PF00392.16	gi|557695146|ref|YP_008798200.1|	-	0.1	12.0	0.0	9	5.8	0.0	2.5	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
PALP	PF00291.20	gi|557695147|ref|YP_008798201.1|	-	1e-72	244.9	0.0	1.3e-72	244.6	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
V4R	PF02830.13	gi|557695148|ref|YP_008798202.1|	-	5.4e-14	51.7	3.0	8e-14	51.2	2.1	1.3	1	0	0	1	1	1	1	V4R	domain
PALP	PF00291.20	gi|557695149|ref|YP_008798203.1|	-	2.9e-63	213.9	0.0	3.4e-63	213.7	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
OTCace	PF00185.19	gi|557695150|ref|YP_008798204.1|	-	1.6e-41	141.7	0.0	2.9e-41	140.9	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|557695150|ref|YP_008798204.1|	-	4e-32	110.8	0.0	5.8e-32	110.2	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
UbiA	PF01040.13	gi|557695151|ref|YP_008798205.1|	-	1.9e-37	128.9	30.5	5.5e-37	127.3	21.1	1.7	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
Pyridox_oxidase	PF01243.15	gi|557695152|ref|YP_008798206.1|	-	0.00031	20.7	0.0	0.00044	20.2	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
MFS_1	PF07690.11	gi|557695153|ref|YP_008798207.1|	-	1.6e-33	115.9	58.6	3.6e-25	88.4	23.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|557695153|ref|YP_008798207.1|	-	0.0031	15.9	0.2	0.0031	15.9	0.1	3.9	2	2	2	4	4	4	2	MFS/sugar	transport	protein
ATP-synt_ab	PF00006.20	gi|557695154|ref|YP_008798208.1|	-	7.1e-64	215.2	0.0	9.3e-64	214.8	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|557695154|ref|YP_008798208.1|	-	3.4e-16	59.7	0.2	6.1e-16	58.8	0.1	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|557695154|ref|YP_008798208.1|	-	5.3e-10	39.3	5.9	5.3e-10	39.3	4.1	1.7	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.5	gi|557695154|ref|YP_008798208.1|	-	2.2e-05	24.2	3.8	0.00026	20.8	1.6	2.5	2	0	0	2	2	2	1	HAS	barrel	domain
ATP-synt_ab	PF00006.20	gi|557695155|ref|YP_008798209.1|	-	3.5e-95	317.5	0.0	4.6e-95	317.1	0.0	1.1	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|557695155|ref|YP_008798209.1|	-	4.4e-17	62.5	0.5	7.8e-17	61.7	0.4	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|557695155|ref|YP_008798209.1|	-	1.9e-11	44.0	0.3	4.9e-11	42.6	0.2	1.8	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
AAA_22	PF13401.1	gi|557695155|ref|YP_008798209.1|	-	0.037	14.1	0.1	0.091	12.9	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
RnfC_N	PF13375.1	gi|557695155|ref|YP_008798209.1|	-	0.17	11.6	0.0	1.9	8.2	0.0	2.4	3	0	0	3	3	3	0	RnfC	Barrel	sandwich	hybrid	domain
DUF853	PF05872.7	gi|557695155|ref|YP_008798209.1|	-	0.24	9.7	0.1	0.37	9.0	0.1	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF853)
ABC_tran	PF00005.22	gi|557695156|ref|YP_008798210.1|	-	1.5e-27	96.5	0.0	2.7e-27	95.7	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|557695156|ref|YP_008798210.1|	-	1.3e-10	41.7	0.1	7e-05	22.9	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|557695156|ref|YP_008798210.1|	-	2e-05	24.0	0.0	5.4e-05	22.6	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|557695156|ref|YP_008798210.1|	-	0.0013	19.1	0.2	0.0024	18.2	0.1	1.4	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|557695156|ref|YP_008798210.1|	-	0.0038	17.4	0.4	0.044	13.9	0.3	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|557695156|ref|YP_008798210.1|	-	0.0051	16.0	0.0	0.0091	15.1	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|557695156|ref|YP_008798210.1|	-	0.0088	15.7	0.2	0.02	14.6	0.1	1.6	1	1	1	2	2	2	1	Archaeal	ATPase
DUF4162	PF13732.1	gi|557695156|ref|YP_008798210.1|	-	0.0089	16.5	0.0	0.022	15.2	0.0	1.7	2	0	0	2	2	1	1	Domain	of	unknown	function	(DUF4162)
UPF0079	PF02367.12	gi|557695156|ref|YP_008798210.1|	-	0.012	15.2	0.2	0.03	13.9	0.1	1.7	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_15	PF13175.1	gi|557695156|ref|YP_008798210.1|	-	0.018	14.1	0.0	3.9	6.4	0.0	2.2	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_16	PF13191.1	gi|557695156|ref|YP_008798210.1|	-	0.019	14.9	0.1	0.095	12.6	0.1	2.1	1	1	0	1	1	1	0	AAA	ATPase	domain
BCA_ABC_TP_C	PF12399.3	gi|557695156|ref|YP_008798210.1|	-	0.041	13.5	0.1	0.096	12.3	0.0	1.7	1	0	0	1	1	1	0	Branched-chain	amino	acid	ATP-binding	cassette	transporter
Rad17	PF03215.10	gi|557695156|ref|YP_008798210.1|	-	0.049	12.3	0.1	0.13	10.9	0.0	1.6	2	0	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
AAA_22	PF13401.1	gi|557695156|ref|YP_008798210.1|	-	0.052	13.6	0.4	0.24	11.5	0.2	2.3	1	1	1	2	2	2	0	AAA	domain
AAA_13	PF13166.1	gi|557695156|ref|YP_008798210.1|	-	0.058	11.8	0.0	0.091	11.2	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|557695156|ref|YP_008798210.1|	-	0.088	13.1	0.9	0.3	11.3	0.6	2.2	1	1	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.16	gi|557695156|ref|YP_008798210.1|	-	0.1	11.7	0.0	0.2	10.7	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.1	gi|557695156|ref|YP_008798210.1|	-	0.12	12.3	0.2	0.31	10.9	0.1	1.7	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|557695156|ref|YP_008798210.1|	-	0.15	11.4	0.5	1.1	8.7	0.1	2.1	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
SMC_N	PF02463.14	gi|557695156|ref|YP_008798210.1|	-	0.16	11.1	0.0	3.3	6.8	0.0	2.1	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|557695156|ref|YP_008798210.1|	-	0.17	11.2	0.2	0.46	9.8	0.0	1.7	2	0	0	2	2	2	0	AAA-like	domain
AAA_19	PF13245.1	gi|557695156|ref|YP_008798210.1|	-	0.2	11.3	1.4	0.67	9.7	0.1	2.4	3	1	0	3	3	2	0	Part	of	AAA	domain
AAA_17	PF13207.1	gi|557695156|ref|YP_008798210.1|	-	0.5	11.1	1.9	1.1	10.0	1.3	1.8	1	1	0	1	1	1	0	AAA	domain
ABC2_membrane_3	PF12698.2	gi|557695157|ref|YP_008798211.1|	-	2.7e-09	36.5	26.3	3.8e-09	36.0	18.2	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
CcmB	PF03379.8	gi|557695157|ref|YP_008798211.1|	-	0.0068	15.6	6.2	0.0068	15.6	4.3	2.8	2	1	1	3	3	3	1	CcmB	protein
ABC2_membrane_2	PF12679.2	gi|557695157|ref|YP_008798211.1|	-	0.14	10.9	23.4	0.59	8.9	16.2	2.1	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|557695158|ref|YP_008798212.1|	-	5.1e-06	25.8	26.6	7.3e-06	25.3	18.4	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|557695158|ref|YP_008798212.1|	-	1e-05	24.5	16.0	1.3e-05	24.2	11.1	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|557695158|ref|YP_008798212.1|	-	0.00026	20.2	21.2	0.00026	20.2	14.7	1.6	2	0	0	2	2	2	1	ABC-2	type	transporter
ADH_zinc_N	PF00107.21	gi|557695159|ref|YP_008798213.1|	-	1.2e-23	83.0	0.0	2e-23	82.3	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|557695159|ref|YP_008798213.1|	-	3.9e-19	68.4	0.2	7e-19	67.5	0.2	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
NADH_4Fe-4S	PF10589.4	gi|557695159|ref|YP_008798213.1|	-	0.00019	20.4	0.7	0.00044	19.3	0.5	1.5	1	0	0	1	1	1	1	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
ADH_zinc_N_2	PF13602.1	gi|557695159|ref|YP_008798213.1|	-	0.00056	20.7	0.0	0.00099	20.0	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|557695159|ref|YP_008798213.1|	-	0.032	13.3	0.0	0.06	12.5	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Peripla_BP_3	PF13377.1	gi|557695159|ref|YP_008798213.1|	-	0.044	13.7	0.0	0.068	13.1	0.0	1.5	1	0	0	1	1	1	0	Periplasmic	binding	protein-like	domain
ADH_zinc_N	PF00107.21	gi|557695160|ref|YP_008798214.1|	-	7.9e-29	99.8	0.0	1.5e-28	98.9	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|557695160|ref|YP_008798214.1|	-	1.2e-27	95.7	0.4	3.1e-27	94.4	0.1	1.8	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.1	gi|557695160|ref|YP_008798214.1|	-	2.6e-05	25.1	0.0	4.9e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
TrkA_N	PF02254.13	gi|557695160|ref|YP_008798214.1|	-	0.059	13.3	0.1	0.11	12.4	0.1	1.4	1	0	0	1	1	1	0	TrkA-N	domain
tRNA_edit	PF04073.10	gi|557695161|ref|YP_008798215.1|	-	3.4e-30	104.4	0.0	4e-30	104.1	0.0	1.1	1	0	0	1	1	1	1	Aminoacyl-tRNA	editing	domain
TauE	PF01925.14	gi|557695162|ref|YP_008798216.1|	-	2.8e-26	92.4	42.3	3.5e-26	92.1	29.3	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF2116	PF09889.4	gi|557695163|ref|YP_008798217.1|	-	0.073	12.8	0.4	0.073	12.8	0.3	2.3	3	0	0	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
TrbC	PF04956.8	gi|557695163|ref|YP_008798217.1|	-	0.09	12.8	4.2	5.3	7.1	0.0	2.7	2	1	0	2	2	2	0	TrbC/VIRB2	family
HTH_31	PF13560.1	gi|557695164|ref|YP_008798218.1|	-	1.6e-06	28.2	0.0	8.1e-06	25.9	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|557695164|ref|YP_008798218.1|	-	2.9e-06	27.2	0.2	3.7e-05	23.6	0.1	2.4	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|557695164|ref|YP_008798218.1|	-	8.8e-06	25.4	0.2	3.4e-05	23.5	0.1	2.0	2	0	0	2	2	2	1	Helix-turn-helix
DUF1973	PF09315.6	gi|557695164|ref|YP_008798218.1|	-	0.13	11.6	0.0	0.23	10.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1973)
DUF4131	PF13567.1	gi|557695165|ref|YP_008798219.1|	-	0.0047	16.3	0.5	0.006	16.0	0.4	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4131)
UPF0182	PF03699.8	gi|557695166|ref|YP_008798220.1|	-	1.2e-36	125.9	2.4	1.2e-36	125.9	1.6	2.7	2	1	0	2	2	2	1	Uncharacterised	protein	family	(UPF0182)
TPP_enzyme_N	PF02776.13	gi|557695167|ref|YP_008798221.1|	-	2.4e-41	141.0	0.1	2.3e-40	137.8	0.0	2.2	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|557695167|ref|YP_008798221.1|	-	4.2e-16	58.8	0.0	1.1e-15	57.4	0.0	1.7	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|557695167|ref|YP_008798221.1|	-	0.00067	19.4	0.0	0.0019	17.9	0.0	1.8	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
XFP_N	PF09364.5	gi|557695167|ref|YP_008798221.1|	-	0.03	12.9	0.2	0.054	12.0	0.1	1.4	1	1	0	1	1	1	0	XFP	N-terminal	domain
PMT	PF02366.13	gi|557695168|ref|YP_008798222.1|	-	8e-06	25.3	10.6	8e-06	25.3	7.3	3.9	4	2	1	5	5	5	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT_2	PF13231.1	gi|557695168|ref|YP_008798222.1|	-	0.00069	19.5	23.9	0.00069	19.5	16.6	3.5	3	1	0	4	4	4	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
Glyco_transf_22	PF03901.12	gi|557695168|ref|YP_008798222.1|	-	0.0046	16.0	5.7	0.0046	16.0	3.9	2.8	3	0	0	3	3	3	1	Alg9-like	mannosyltransferase	family
Sperm_Ag_HE2	PF05324.8	gi|557695169|ref|YP_008798223.1|	-	0.2	11.5	1.3	0.38	10.7	0.0	2.0	2	0	0	2	2	2	0	Sperm	antigen	HE2
DUF788	PF05620.6	gi|557695170|ref|YP_008798224.1|	-	1.2	9.0	4.1	0.86	9.4	0.4	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF788)
PRC	PF05239.11	gi|557695171|ref|YP_008798225.1|	-	4.2e-05	23.3	0.4	6.7e-05	22.6	0.3	1.4	1	1	0	1	1	1	1	PRC-barrel	domain
Lar_restr_allev	PF14354.1	gi|557695171|ref|YP_008798225.1|	-	0.026	14.8	1.0	0.044	14.0	0.7	1.3	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
DZR	PF12773.2	gi|557695171|ref|YP_008798225.1|	-	0.037	13.8	0.4	0.06	13.1	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
Zn_Tnp_IS1595	PF12760.2	gi|557695171|ref|YP_008798225.1|	-	0.048	13.4	5.1	0.067	13.0	3.6	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF2256	PF10013.4	gi|557695171|ref|YP_008798225.1|	-	0.17	11.6	2.9	0.11	12.3	0.8	1.5	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
C1_1	PF00130.17	gi|557695171|ref|YP_008798225.1|	-	0.22	11.3	1.3	0.31	10.7	0.9	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Sgf11	PF08209.6	gi|557695171|ref|YP_008798225.1|	-	0.99	8.7	2.9	11	5.4	0.2	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-RING_3	PF14369.1	gi|557695171|ref|YP_008798225.1|	-	4.3	7.4	6.9	25	4.9	2.5	2.2	2	0	0	2	2	2	0	zinc-finger
Ald_Xan_dh_C2	PF02738.13	gi|557695172|ref|YP_008798226.1|	-	1.6e-151	505.3	0.0	1.9e-151	505.1	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|557695172|ref|YP_008798226.1|	-	1.1e-29	102.6	0.0	2.1e-29	101.8	0.0	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
MazG	PF03819.12	gi|557695174|ref|YP_008798228.1|	-	4.2e-12	45.8	0.0	5.3e-12	45.5	0.0	1.2	1	0	0	1	1	1	1	MazG	nucleotide	pyrophosphohydrolase	domain
MttA_Hcf106	PF02416.11	gi|557695175|ref|YP_008798229.1|	-	3.9e-07	29.0	5.4	1.9e-06	26.8	3.7	2.2	1	1	0	1	1	1	1	mttA/Hcf106	family
DUF677	PF05055.7	gi|557695175|ref|YP_008798229.1|	-	0.066	11.8	0.0	0.078	11.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
CcdA	PF07362.7	gi|557695175|ref|YP_008798229.1|	-	0.075	12.9	0.1	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	Post-segregation	antitoxin	CcdA
Nif11	PF07862.6	gi|557695175|ref|YP_008798229.1|	-	0.12	12.3	0.1	0.19	11.7	0.0	1.4	1	0	0	1	1	1	0	Nitrogen	fixation	protein	of	unknown	function