# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cdc6_C PF09079.11 BAJ49870.1 - 2.6e-13 49.7 0.0 5.7e-13 48.7 0.0 1.5 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_16 PF13191.6 BAJ49870.1 - 3.6e-08 34.0 1.4 2.3e-07 31.4 0.2 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 BAJ49870.1 - 9.4e-08 32.4 0.0 2.3e-07 31.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain TIP49_C PF17856.1 BAJ49870.1 - 5.6e-06 26.4 0.2 6.9e-05 22.9 0.1 2.3 2 0 0 2 2 2 1 TIP49 AAA-lid domain AAA PF00004.29 BAJ49870.1 - 4.9e-05 23.8 0.0 0.00012 22.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 BAJ49870.1 - 0.0071 16.3 0.2 0.017 15.1 0.0 1.8 2 1 0 2 2 2 1 NACHT domain AFG1_ATPase PF03969.16 BAJ49870.1 - 0.02 13.8 0.0 0.033 13.1 0.0 1.2 1 0 0 1 1 1 0 AFG1-like ATPase Sigma54_activat PF00158.26 BAJ49870.1 - 0.032 13.9 0.0 0.073 12.8 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain TsaE PF02367.17 BAJ49870.1 - 0.074 13.0 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 BAJ49870.1 - 0.078 13.5 0.0 0.18 12.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_32 PF13654.6 BAJ49870.1 - 0.1 11.3 0.4 3 6.5 0.2 2.2 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 BAJ49870.1 - 0.11 11.6 0.0 0.22 10.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) RFX_DNA_binding PF02257.15 BAJ49870.1 - 0.12 13.0 0.0 0.33 11.6 0.0 1.7 2 0 0 2 2 1 0 RFX DNA-binding domain Zeta_toxin PF06414.12 BAJ49870.1 - 0.15 11.3 0.2 0.51 9.6 0.1 1.8 1 1 1 2 2 2 0 Zeta toxin TniB PF05621.11 BAJ49870.1 - 0.17 11.3 0.0 0.35 10.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein AAA PF00004.29 BAJ49871.1 - 1.5e-13 51.3 0.0 7.2e-13 49.1 0.0 2.2 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 BAJ49871.1 - 1.4e-07 31.7 0.0 4.6e-07 29.9 0.0 1.8 1 1 1 2 2 2 1 Rad17 P-loop domain AAA_22 PF13401.6 BAJ49871.1 - 5.4e-06 26.7 0.9 0.0033 17.7 0.1 3.1 2 2 1 3 3 3 1 AAA domain AAA_16 PF13191.6 BAJ49871.1 - 7.4e-06 26.4 0.9 3.3e-05 24.3 0.0 2.5 3 2 0 3 3 3 1 AAA ATPase domain RuvB_N PF05496.12 BAJ49871.1 - 8e-06 25.7 0.1 3.6e-05 23.6 0.0 2.1 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 BAJ49871.1 - 2.9e-05 24.3 0.0 6.9e-05 23.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RFC1 PF08519.12 BAJ49871.1 - 0.0002 21.5 0.1 0.00034 20.8 0.1 1.3 1 0 0 1 1 1 1 Replication factor RFC1 C terminal domain DUF815 PF05673.13 BAJ49871.1 - 0.00036 19.8 0.0 0.00062 19.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_assoc_2 PF16193.5 BAJ49871.1 - 0.0004 20.7 0.3 0.0012 19.1 0.2 1.9 1 1 0 1 1 1 1 AAA C-terminal domain AAA_14 PF13173.6 BAJ49871.1 - 0.0019 18.2 0.0 0.0044 17.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain Bac_DnaA PF00308.18 BAJ49871.1 - 0.0021 18.0 0.3 0.03 14.2 0.3 2.4 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_33 PF13671.6 BAJ49871.1 - 0.0024 18.1 0.1 0.011 15.9 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 BAJ49871.1 - 0.0031 17.5 0.0 0.0097 15.9 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 BAJ49871.1 - 0.0033 17.2 0.3 0.011 15.4 0.3 1.9 1 0 0 1 1 1 1 AAA domain TniB PF05621.11 BAJ49871.1 - 0.0034 16.8 0.0 0.18 11.2 0.0 2.5 1 1 1 2 2 2 1 Bacterial TniB protein AAA_7 PF12775.7 BAJ49871.1 - 0.0096 15.4 0.0 0.022 14.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing dynein motor region RsgA_GTPase PF03193.16 BAJ49871.1 - 0.011 15.7 0.0 0.023 14.6 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 BAJ49871.1 - 0.021 14.9 0.0 0.052 13.6 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase IstB_IS21 PF01695.17 BAJ49871.1 - 0.036 13.8 0.0 0.11 12.3 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein ATPase_2 PF01637.18 BAJ49871.1 - 0.05 13.5 0.1 0.23 11.3 0.1 2.1 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea Roc PF08477.13 BAJ49871.1 - 0.057 13.6 0.0 0.18 12.0 0.0 1.8 2 0 0 2 2 1 0 Ras of Complex, Roc, domain of DAPkinase NACHT PF05729.12 BAJ49871.1 - 0.071 13.0 0.0 1.4 8.9 0.0 2.4 2 0 0 2 2 2 0 NACHT domain AAA_24 PF13479.6 BAJ49871.1 - 0.081 12.6 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 BAJ49871.1 - 0.09 12.8 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PPV_E1_C PF00519.17 BAJ49871.1 - 0.12 11.2 0.1 0.75 8.6 0.0 2.0 2 0 0 2 2 2 0 Papillomavirus helicase AAA_29 PF13555.6 BAJ49871.1 - 0.14 11.9 0.2 0.37 10.6 0.0 1.8 2 0 0 2 2 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 BAJ49871.1 - 0.14 12.4 0.6 0.93 9.7 0.0 2.4 3 0 0 3 3 3 0 AAA domain AAA_6 PF12774.7 BAJ49871.1 - 0.16 10.9 0.0 0.31 10.0 0.0 1.4 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Rep_fac_C PF08542.11 BAJ49872.1 - 6.7e-19 68.1 0.0 2.6e-18 66.2 0.0 2.1 2 0 0 2 2 1 1 Replication factor C C-terminal domain AAA PF00004.29 BAJ49872.1 - 5.7e-15 55.9 0.0 1.2e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 BAJ49872.1 - 1e-14 54.7 0.0 1.6e-09 37.8 0.0 2.3 1 1 1 2 2 2 2 DNA polymerase III, delta subunit RuvB_N PF05496.12 BAJ49872.1 - 8.2e-07 28.9 0.0 2.7e-06 27.2 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_assoc_2 PF16193.5 BAJ49872.1 - 5.4e-06 26.7 0.1 1.3e-05 25.4 0.1 1.7 1 0 0 1 1 1 1 AAA C-terminal domain DNA_pol3_delta PF06144.13 BAJ49872.1 - 1.1e-05 25.3 0.0 1.6e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Rad17 PF03215.15 BAJ49872.1 - 1.7e-05 24.8 0.0 3.3e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 BAJ49872.1 - 2.5e-05 24.7 0.0 0.00018 21.9 0.0 2.0 1 1 1 2 2 2 1 AAA ATPase domain Mg_chelatase PF01078.21 BAJ49872.1 - 0.00024 20.6 0.0 0.0031 16.9 0.0 2.3 2 1 1 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 BAJ49872.1 - 0.00028 21.1 0.0 0.058 13.7 0.0 2.7 2 1 1 3 3 2 1 AAA domain AAA_14 PF13173.6 BAJ49872.1 - 0.00045 20.3 0.0 0.0016 18.5 0.0 1.9 1 1 1 2 2 2 1 AAA domain ResIII PF04851.15 BAJ49872.1 - 0.00057 19.9 0.0 0.0024 17.9 0.0 1.9 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit TIP49 PF06068.13 BAJ49872.1 - 0.0027 17.0 0.0 0.0048 16.1 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain TniB PF05621.11 BAJ49872.1 - 0.0092 15.4 0.0 0.22 10.9 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein PhoH PF02562.16 BAJ49872.1 - 0.016 14.7 0.0 0.037 13.5 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 BAJ49872.1 - 0.017 14.6 0.0 0.032 13.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_11 PF13086.6 BAJ49872.1 - 0.018 14.9 0.0 0.029 14.2 0.0 1.3 1 1 0 1 1 1 0 AAA domain DUF815 PF05673.13 BAJ49872.1 - 0.025 13.8 0.0 0.08 12.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_19 PF13245.6 BAJ49872.1 - 0.028 14.7 0.0 0.058 13.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 BAJ49872.1 - 0.03 14.1 0.0 0.086 12.6 0.0 2.0 1 1 0 1 1 1 0 IstB-like ATP binding protein Sigma54_activat PF00158.26 BAJ49872.1 - 0.031 14.0 0.1 0.097 12.4 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 BAJ49872.1 - 0.038 13.3 0.0 0.09 12.0 0.0 1.6 1 1 0 1 1 1 0 Zeta toxin AAA_3 PF07726.11 BAJ49872.1 - 0.048 13.5 0.0 0.1 12.4 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DNA_pol3_gamma3 PF12169.8 BAJ49872.1 - 0.061 13.2 0.0 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 DNA polymerase III subunits gamma and tau domain III T2SSE PF00437.20 BAJ49872.1 - 0.08 12.0 0.0 0.17 10.9 0.0 1.6 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_28 PF13521.6 BAJ49872.1 - 0.12 12.6 0.0 0.26 11.5 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 BAJ49872.1 - 0.12 12.1 0.0 0.35 10.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 BAJ49872.1 - 0.14 12.2 0.0 0.45 10.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 BAJ49872.1 - 0.18 12.2 0.0 0.38 11.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase TatD_DNase PF01026.21 BAJ49873.1 - 8e-58 195.8 0.0 9e-58 195.6 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_1 PF01979.20 BAJ49873.1 - 0.0091 15.3 0.0 0.038 13.3 0.0 1.9 2 1 0 2 2 2 1 Amidohydrolase family RTC4 PF14474.6 BAJ49873.1 - 0.042 14.0 0.0 0.073 13.2 0.0 1.4 1 0 0 1 1 1 0 RTC4-like domain Lactamase_B_3 PF13483.6 BAJ49875.1 - 1.1e-34 119.8 0.1 1.3e-34 119.5 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 BAJ49875.1 - 9.6e-20 71.0 0.0 1.3e-19 70.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 BAJ49875.1 - 0.0055 16.7 3.2 0.014 15.4 3.2 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily DUF3298 PF11738.8 BAJ49875.1 - 0.075 14.1 0.0 0.24 12.4 0.0 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3298) SnoaL_3 PF13474.6 BAJ49877.1 - 6.7e-10 39.3 0.0 8e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 BAJ49877.1 - 0.00011 22.5 0.0 0.00015 22.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) CaMKII_AD PF08332.10 BAJ49877.1 - 0.019 15.1 0.0 0.25 11.5 0.0 2.1 2 0 0 2 2 2 0 Calcium/calmodulin dependent protein kinase II association domain DUF3636 PF12331.8 BAJ49879.1 - 0.0096 15.8 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3636) DHNA PF04038.12 BAJ49880.1 - 2e-30 105.5 0.0 2.4e-30 105.2 0.0 1.1 1 0 0 1 1 1 1 Dihydroneopterin aldolase DnaJ PF00226.31 BAJ49881.1 - 1.7e-29 101.7 2.6 3e-29 101.0 2.6 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_C PF01556.18 BAJ49881.1 - 3.1e-20 72.8 0.0 3.8e-20 72.5 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.19 BAJ49881.1 - 2.9e-10 40.4 16.2 4.6e-10 39.7 16.2 1.3 1 0 0 1 1 1 1 DnaJ central domain TackOD1 PF18551.1 BAJ49881.1 - 0.7 9.5 2.7 5.4 6.6 0.1 2.2 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 Anti-TRAP PF15777.5 BAJ49881.1 - 1.5 8.8 13.9 3.7 7.6 2.6 2.7 2 1 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-FPG_IleRS PF06827.14 BAJ49881.1 - 2.4 8.1 10.0 15 5.6 0.7 3.5 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS HSP70 PF00012.20 BAJ49882.1 - 1.6e-223 743.3 5.8 1.4e-220 733.6 5.8 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 BAJ49882.1 - 1.7e-18 66.5 3.1 2.1e-17 63.0 3.1 2.3 1 1 0 1 1 1 1 MreB/Mbl protein FGGY_C PF02782.16 BAJ49882.1 - 3e-05 23.8 0.0 6.1e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain StbA PF06406.11 BAJ49882.1 - 0.0027 17.0 0.0 0.027 13.7 0.1 2.4 2 1 1 3 3 3 1 StbA protein NCA2 PF08637.10 BAJ49882.1 - 0.043 13.0 0.5 0.072 12.2 0.5 1.3 1 0 0 1 1 1 0 ATP synthase regulation protein NCA2 DUF45 PF01863.17 BAJ49882.1 - 0.064 13.3 0.4 0.14 12.2 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF45 Raco_middle PF17651.1 BAJ49882.1 - 0.089 12.5 0.1 0.85 9.3 0.0 2.7 2 0 0 2 2 2 0 RACo middle region Emaravirus_P4 PF16505.5 BAJ49882.1 - 0.099 11.6 0.1 0.17 10.9 0.1 1.3 1 0 0 1 1 1 0 P4 movement protein of Emaravirus, and the 30K superfamily DUF3347 PF11827.8 BAJ49882.1 - 0.11 12.7 3.9 0.19 11.9 3.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3347) FtsA PF14450.6 BAJ49882.1 - 0.17 12.3 7.4 0.22 11.9 0.0 3.9 4 2 0 4 4 4 0 Cell division protein FtsA CdiI_2 PF18593.1 BAJ49882.1 - 5.2 7.8 5.9 32 5.3 0.9 3.0 2 1 1 3 3 3 0 CdiI immunity protein GrpE PF01025.19 BAJ49883.1 - 4.4e-39 133.8 0.7 5.2e-39 133.6 0.7 1.0 1 0 0 1 1 1 1 GrpE MnmE_helical PF12631.7 BAJ49883.1 - 0.016 15.4 0.4 0.021 15.0 0.4 1.2 1 0 0 1 1 1 0 MnmE helical domain Baculo_PEP_C PF04513.12 BAJ49883.1 - 0.077 13.0 0.4 0.11 12.6 0.4 1.3 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus COG2 PF06148.11 BAJ49883.1 - 1.2 9.3 5.5 0.68 10.0 3.5 1.6 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 GIT_CC PF16559.5 BAJ49884.1 - 0.094 12.6 0.0 0.26 11.2 0.0 1.8 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF354 PF04007.12 BAJ49885.1 - 1.2e-35 123.2 0.0 1.5e-35 122.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glycos_transf_4 PF00953.21 BAJ49886.1 - 3.1e-24 85.8 8.3 3.1e-24 85.8 8.3 1.9 2 1 0 2 2 2 1 Glycosyl transferase family 4 DUF4293 PF14126.6 BAJ49886.1 - 2.6 8.3 9.2 4.6 7.5 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4293) GFO_IDH_MocA PF01408.22 BAJ49889.1 - 2.3e-32 112.3 0.1 3.8e-32 111.6 0.1 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 BAJ49889.1 - 1e-05 25.5 0.0 3.2e-05 23.9 0.0 1.9 1 1 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 BAJ49889.1 - 2.4e-05 25.0 0.1 0.00011 22.9 0.0 1.9 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 BAJ49889.1 - 6.7e-05 23.3 0.0 0.00017 22.0 0.0 1.7 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 BAJ49889.1 - 0.00027 20.9 0.1 0.00068 19.6 0.1 1.6 1 1 0 1 1 1 1 Zinc-binding dehydrogenase CoA_binding PF02629.19 BAJ49889.1 - 0.061 14.0 0.0 0.13 12.9 0.0 1.6 1 0 0 1 1 1 0 CoA binding domain UDPG_MGDP_dh_N PF03721.14 BAJ49889.1 - 0.08 12.5 0.0 0.21 11.1 0.0 1.8 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.21 BAJ49889.1 - 0.085 12.1 0.4 0.18 11.0 0.3 1.6 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain ATPase PF06745.13 BAJ49890.1 - 5.8e-16 58.5 0.0 7.1e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 KaiC DUF835 PF05763.12 BAJ49890.1 - 0.00061 19.5 0.0 0.012 15.4 0.0 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF835) GvpD PF07088.11 BAJ49890.1 - 0.061 11.9 0.0 0.061 11.9 0.0 1.2 1 0 0 1 1 1 0 GvpD gas vesicle protein MEDS PF14417.6 BAJ49890.1 - 0.094 12.5 0.0 0.15 11.9 0.0 1.4 1 1 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_22 PF13401.6 BAJ49890.1 - 0.15 12.3 0.0 0.22 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain PolC_DP2 PF03833.13 BAJ49891.1 - 8.3e-06 24.0 0.0 1e-05 23.7 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 Sec34 PF04136.15 BAJ49892.1 - 0.029 14.3 1.5 1.3 8.9 0.1 2.6 2 1 0 2 2 2 0 Sec34-like family HTH_50 PF18024.1 BAJ49892.1 - 0.05 13.2 0.0 3.9 7.2 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain PROL5-SMR PF15621.6 BAJ49893.1 - 0.54 10.8 5.1 0.5 10.9 1.3 2.5 1 1 0 2 2 2 0 Proline-rich submaxillary gland androgen-regulated family N6_Mtase PF02384.16 BAJ49894.1 - 1.1e-10 41.3 0.0 4.7e-05 22.8 0.0 3.3 3 0 0 3 3 3 2 N-6 DNA Methylase Eco57I PF07669.11 BAJ49894.1 - 2.9e-08 34.2 0.1 8.2e-08 32.7 0.1 1.7 1 0 0 1 1 1 1 Eco57I restriction-modification methylase UPF0020 PF01170.18 BAJ49894.1 - 0.0057 16.4 0.2 0.11 12.1 0.0 2.9 3 1 0 3 3 3 1 Putative RNA methylase family UPF0020 Helicase_C PF00271.31 BAJ49895.1 - 1.7e-15 57.3 0.0 5.5e-15 55.7 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PLDc_2 PF13091.6 BAJ49895.1 - 3.3e-11 43.2 0.0 7.8e-11 42.0 0.0 1.7 1 0 0 1 1 1 1 PLD-like domain SNF2_N PF00176.23 BAJ49895.1 - 4.5e-10 38.8 0.7 4.9e-07 28.8 0.0 3.2 2 1 1 3 3 3 2 SNF2 family N-terminal domain ResIII PF04851.15 BAJ49895.1 - 4.5e-09 36.5 0.0 0.0049 16.9 0.0 2.8 1 1 1 2 2 2 2 Type III restriction enzyme, res subunit Flavi_DEAD PF07652.14 BAJ49895.1 - 5.8e-06 26.4 0.0 0.00031 20.8 0.0 2.8 1 1 0 1 1 1 1 Flavivirus DEAD domain AAA_22 PF13401.6 BAJ49895.1 - 0.0001 22.6 0.1 0.001 19.3 0.0 2.8 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 BAJ49895.1 - 0.00017 21.4 0.3 0.0013 18.5 0.1 2.5 2 1 0 2 2 2 1 IstB-like ATP binding protein DEAD PF00270.29 BAJ49895.1 - 0.0006 19.6 0.1 0.68 9.7 0.0 3.0 2 1 1 3 3 3 2 DEAD/DEAH box helicase AAA PF00004.29 BAJ49895.1 - 0.11 12.9 0.1 1.7 9.1 0.0 3.0 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) Excalibur PF05901.11 BAJ49897.1 - 0.0032 18.0 2.2 0.0048 17.5 2.2 1.5 1 1 0 1 1 1 1 Excalibur calcium-binding domain FSA_C PF10479.9 BAJ49897.1 - 0.26 9.4 13.6 0.29 9.2 13.6 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus TrmB PF01978.19 BAJ49898.1 - 0.00015 21.6 0.1 0.00018 21.3 0.1 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 BAJ49898.1 - 0.00031 20.6 0.0 0.00044 20.1 0.0 1.2 1 0 0 1 1 1 1 MarR family DUF977 PF06163.11 BAJ49898.1 - 0.0031 17.4 0.1 0.004 17.1 0.1 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF977) HTH_47 PF16221.5 BAJ49898.1 - 0.037 13.6 0.0 0.045 13.3 0.0 1.1 1 0 0 1 1 1 0 winged helix-turn-helix HTH_24 PF13412.6 BAJ49898.1 - 0.053 13.1 0.1 0.085 12.4 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 BAJ49898.1 - 0.058 13.2 0.0 0.091 12.6 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain RIFIN PF02009.16 BAJ49898.1 - 0.096 12.6 1.5 0.11 12.3 1.5 1.1 1 0 0 1 1 1 0 Rifin DprA_WH PF17782.1 BAJ49898.1 - 0.099 12.8 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 DprA winged helix domain RPA_C PF08784.11 BAJ49898.1 - 0.099 13.3 0.1 0.16 12.7 0.1 1.4 1 1 0 1 1 1 0 Replication protein A C terminal HTH_27 PF13463.6 BAJ49898.1 - 0.16 12.5 0.2 1.6 9.3 0.2 2.1 1 1 0 1 1 1 0 Winged helix DNA-binding domain RNaseH_like PF04308.12 BAJ49899.1 - 0.13 12.2 0.0 1.8 8.4 0.0 2.1 2 0 0 2 2 2 0 Ribonuclease H-like AAA_31 PF13614.6 BAJ49900.1 - 7e-57 192.2 0.4 1e-56 191.7 0.4 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 BAJ49900.1 - 2.2e-20 73.0 0.0 3.8e-20 72.2 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 BAJ49900.1 - 1.7e-10 40.7 0.1 1.9e-06 27.6 0.0 2.2 2 0 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 BAJ49900.1 - 4.5e-10 39.4 0.0 0.00035 20.1 0.0 2.2 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 BAJ49900.1 - 6.2e-10 38.8 0.1 9.8e-05 21.8 0.0 2.1 1 1 0 2 2 2 2 ATPase MipZ ArsA_ATPase PF02374.15 BAJ49900.1 - 6.7e-08 32.1 0.0 2.9e-07 30.0 0.0 2.0 1 1 1 2 2 2 1 Anion-transporting ATPase Fer4_NifH PF00142.18 BAJ49900.1 - 1.6e-05 24.5 0.0 3.3e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family VirC1 PF07015.11 BAJ49900.1 - 6.1e-05 22.4 0.0 0.0019 17.5 0.0 2.1 2 0 0 2 2 2 1 VirC1 protein AAA_25 PF13481.6 BAJ49900.1 - 0.0013 18.4 0.0 0.0022 17.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 BAJ49900.1 - 0.0095 15.6 0.1 0.38 10.4 0.1 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain ResIII PF04851.15 BAJ49900.1 - 0.054 13.5 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit ATP_bind_1 PF03029.17 BAJ49900.1 - 0.076 12.8 0.1 0.62 9.8 0.1 2.0 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 BAJ49900.1 - 0.089 13.2 0.0 0.28 11.6 0.0 1.8 2 0 0 2 2 2 0 RNA helicase LSM14 PF12701.7 BAJ49902.1 - 0.0014 18.7 0.0 0.0041 17.2 0.0 1.7 2 0 0 2 2 2 1 Scd6-like Sm domain PQQ PF01011.21 BAJ49902.1 - 0.0024 17.7 1.8 0.32 11.0 0.4 3.9 4 0 0 4 4 4 1 PQQ enzyme repeat PQQ_2 PF13360.6 BAJ49902.1 - 0.045 13.3 0.0 13 5.3 0.0 3.6 2 2 1 3 3 3 0 PQQ-like domain PQQ_3 PF13570.6 BAJ49902.1 - 6.3 7.4 9.1 0.47 11.0 0.3 3.7 5 1 0 5 5 5 0 PQQ-like domain DUF559 PF04480.12 BAJ49903.1 - 0.04 13.8 0.1 0.051 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF559) DUF5615 PF18480.1 BAJ49904.1 - 0.028 14.1 0.0 0.26 11.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5615) AAA_15 PF13175.6 BAJ49905.1 - 2.1e-34 119.9 0.0 3.5e-32 112.5 0.0 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 BAJ49905.1 - 1.3e-21 77.7 0.3 1.2e-13 51.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ49905.1 - 1.6e-09 37.5 0.4 7.6e-07 28.8 0.1 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain DUF2813 PF11398.8 BAJ49905.1 - 1.4e-07 31.1 1.8 6.6e-06 25.6 0.2 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF2813) AAA_23 PF13476.6 BAJ49905.1 - 3.4e-07 31.0 0.0 8.8e-07 29.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 BAJ49905.1 - 0.00031 21.3 0.0 0.00065 20.2 0.0 1.6 1 0 0 1 1 1 1 ABC transporter DUF3696 PF12476.8 BAJ49905.1 - 0.00032 21.0 0.0 0.00074 19.9 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3696) AAA_27 PF13514.6 BAJ49905.1 - 0.00033 20.3 0.0 0.00091 18.9 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 BAJ49905.1 - 0.0005 19.7 0.1 0.0024 17.6 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain ATPase_2 PF01637.18 BAJ49905.1 - 0.00093 19.2 0.1 0.0025 17.8 0.0 1.7 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 BAJ49905.1 - 0.051 14.0 0.1 0.21 12.0 0.0 1.9 2 1 0 2 2 2 0 AAA ATPase domain DUF72 PF01904.18 BAJ49906.1 - 9.2e-29 101.1 0.0 1.3e-28 100.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF72 DUF5343 PF17278.2 BAJ49906.1 - 0.028 14.5 0.0 0.051 13.7 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5343) DUF72 PF01904.18 BAJ49907.1 - 1.6e-59 201.6 0.0 2.4e-59 201.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF72 DUF433 PF04255.14 BAJ49908.1 - 0.32 10.9 1.2 8.4 6.3 0.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF433) CarboxypepD_reg PF13620.6 BAJ49909.1 - 3.5e-24 84.9 21.9 0.00012 22.3 0.7 8.4 7 1 1 8 8 8 7 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 BAJ49909.1 - 2.6e-09 36.9 1.1 0.72 9.9 0.0 7.2 6 1 1 7 7 7 1 CarboxypepD_reg-like domain Y_Y_Y PF07495.13 BAJ49909.1 - 5.7e-09 35.8 0.1 0.72 9.8 0.0 5.3 5 0 0 5 5 5 3 Y_Y_Y domain Big_1 PF02369.16 BAJ49909.1 - 2.2e-05 24.4 0.3 14 5.8 0.3 5.8 4 0 0 4 4 4 1 Bacterial Ig-like domain (group 1) DUF2012 PF09430.10 BAJ49909.1 - 0.0005 20.2 0.2 5.8 7.0 0.0 4.1 3 0 0 3 3 3 1 Protein of unknown function (DUF2012) DUF4198 PF10670.9 BAJ49909.1 - 0.0012 19.3 0.5 9.1 6.6 0.0 4.2 4 0 0 4 4 4 1 Domain of unknown function (DUF4198) SpaA PF17802.1 BAJ49909.1 - 0.0022 18.3 5.2 83 3.6 0.0 6.4 6 1 0 7 7 7 0 Prealbumin-like fold domain BiPBP_C PF06832.12 BAJ49909.1 - 0.04 13.9 0.4 1.8 8.7 0.0 3.5 2 2 1 3 3 3 0 Penicillin-Binding Protein C-terminus Family DUF4397 PF14344.6 BAJ49909.1 - 0.099 13.4 0.1 6.8 7.5 0.0 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4397) SdrD_B PF17210.3 BAJ49909.1 - 0.58 10.4 6.2 1.3e+02 2.8 0.0 5.6 6 1 0 7 7 7 0 SdrD B-like domain PALP PF00291.25 BAJ49911.1 - 7.4e-72 242.2 2.7 8.8e-72 242.0 2.7 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HypA PF01155.19 BAJ49911.1 - 0.077 13.0 0.1 0.15 12.1 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rpp20 PF12328.8 BAJ49911.1 - 0.16 11.9 0.1 4.1 7.4 0.0 2.7 2 1 0 2 2 2 0 Rpp20 subunit of nuclear RNase MRP and P ACP_syn_III_C PF08541.10 BAJ49911.1 - 0.19 11.9 1.1 34 4.7 0.0 3.3 2 1 1 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RtcB PF01139.17 BAJ49912.1 - 6.3e-154 513.1 0.0 7.2e-154 512.9 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Intein_splicing PF14890.6 BAJ49912.1 - 3.8e-15 56.0 0.0 6.8e-15 55.2 0.0 1.4 1 0 0 1 1 1 1 Intein splicing domain LAGLIDADG_3 PF14528.6 BAJ49912.1 - 2.9e-07 30.7 0.4 0.015 15.6 0.0 3.0 2 1 0 2 2 2 2 LAGLIDADG-like domain Aldedh PF00171.22 BAJ49913.1 - 4.4e-148 493.6 0.9 4.9e-148 493.5 0.9 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 BAJ49913.1 - 7.2e-05 22.3 0.1 0.00023 20.7 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1487) NERD PF08378.11 BAJ49914.1 - 0.093 13.2 0.0 0.23 11.9 0.0 1.7 1 0 0 1 1 1 0 Nuclease-related domain PYRIN PF02758.16 BAJ49914.1 - 4.4 7.5 5.4 7.9 6.7 2.8 2.7 3 0 0 3 3 3 0 PAAD/DAPIN/Pyrin domain PIN PF01850.21 BAJ49916.1 - 8.8e-12 45.6 0.1 4.2e-11 43.4 0.1 1.8 1 1 0 1 1 1 1 PIN domain VAPB_antitox PF02697.14 BAJ49917.1 - 1.6e-07 32.0 4.8 1.8e-07 31.8 4.8 1.0 1 0 0 1 1 1 1 Putative antitoxin Ras_bdg_2 PF14847.6 BAJ49917.1 - 0.063 13.6 0.2 0.076 13.4 0.2 1.1 1 0 0 1 1 1 0 Ras-binding domain of Byr2 AsnC_trans_reg PF01037.21 BAJ49918.1 - 1.5e-15 56.9 0.0 2.1e-15 56.4 0.0 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 BAJ49918.1 - 4.5e-15 54.9 0.4 7.5e-15 54.2 0.4 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 BAJ49918.1 - 7e-14 51.4 1.1 1.2e-13 50.6 1.1 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Arc_trans_TRASH PF08394.10 BAJ49918.1 - 2.3e-07 31.0 4.2 4.1e-07 30.2 4.2 1.5 1 0 0 1 1 1 1 Archaeal TRASH domain MarR PF01047.22 BAJ49918.1 - 3e-07 30.3 0.1 6e-07 29.3 0.1 1.5 1 0 0 1 1 1 1 MarR family zf-FCS PF06467.14 BAJ49918.1 - 0.00011 22.0 1.1 0.00025 20.9 1.1 1.5 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif MarR_2 PF12802.7 BAJ49918.1 - 0.00056 19.7 0.1 0.0011 18.8 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 BAJ49918.1 - 0.0006 19.7 0.1 0.0012 18.8 0.1 1.5 1 0 0 1 1 1 1 HTH domain YHS PF04945.13 BAJ49918.1 - 0.0017 18.4 0.1 0.0029 17.7 0.1 1.3 1 0 0 1 1 1 1 YHS domain GntR PF00392.21 BAJ49918.1 - 0.0024 17.5 0.1 0.0046 16.6 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 BAJ49918.1 - 0.0035 17.1 0.1 0.0068 16.1 0.1 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_IclR PF09339.10 BAJ49918.1 - 0.0048 16.7 0.0 0.0084 15.9 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain ATPase-cat_bd PF12156.8 BAJ49918.1 - 0.0051 17.5 1.4 0.0091 16.7 1.4 1.4 1 0 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase HTH_20 PF12840.7 BAJ49918.1 - 0.018 15.1 0.0 0.042 13.9 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 BAJ49918.1 - 0.15 12.3 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Mga PF05043.13 BAJ49918.1 - 0.18 12.4 0.0 0.33 11.6 0.0 1.4 1 0 0 1 1 1 0 Mga helix-turn-helix domain Ta0938 PF11494.8 BAJ49918.1 - 0.23 11.8 0.8 0.63 10.3 0.8 1.7 1 0 0 1 1 1 0 Ta0938 DUF716 PF04819.12 BAJ49919.1 - 0.028 14.1 0.9 0.034 13.8 0.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF716) E1-E2_ATPase PF00122.20 BAJ49920.1 - 3.7e-57 192.8 1.0 3.7e-57 192.8 1.0 1.9 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 BAJ49920.1 - 1.9e-46 159.0 2.6 3.5e-46 158.2 2.6 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 BAJ49920.1 - 1.3e-33 115.2 0.9 5.7e-16 58.7 0.0 2.7 2 0 0 2 2 2 2 Heavy-metal-associated domain Hydrolase_3 PF08282.12 BAJ49920.1 - 6.2e-07 29.4 0.7 0.0028 17.5 0.2 2.6 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 BAJ49920.1 - 0.002 18.6 0.0 0.0076 16.7 0.0 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 BAJ49920.1 - 0.012 15.7 0.1 0.034 14.2 0.1 1.8 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 BAJ49920.1 - 0.015 15.4 0.0 0.18 11.9 0.0 2.8 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase LPD22 PF18834.1 BAJ49920.1 - 0.03 14.5 0.0 0.3 11.3 0.0 2.4 2 0 0 2 2 2 0 Large polyvalent protein associated domain 22 Tox-PL-2 PF15643.6 BAJ49920.1 - 0.13 12.4 0.0 18 5.5 0.0 2.4 2 0 0 2 2 2 0 Papain fold toxin 2 Fer2_BFD PF04324.15 BAJ49920.1 - 0.41 11.0 3.4 19 5.7 0.1 3.4 3 0 0 3 3 3 0 BFD-like [2Fe-2S] binding domain YHS PF04945.13 BAJ49921.1 - 4.2e-20 71.6 1.4 5e-20 71.3 1.4 1.0 1 0 0 1 1 1 1 YHS domain Arc_trans_TRASH PF08394.10 BAJ49921.1 - 0.0016 18.7 0.2 0.0027 18.0 0.2 1.4 1 1 0 1 1 1 1 Archaeal TRASH domain Ribosomal_L24e PF01246.20 BAJ49921.1 - 0.041 14.1 0.3 0.05 13.8 0.3 1.1 1 0 0 1 1 1 0 Ribosomal protein L24e DUF2116 PF09889.9 BAJ49921.1 - 0.75 9.8 3.5 0.6 10.1 1.0 2.1 2 1 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) CcdA PF07362.12 BAJ49922.1 - 0.00074 19.9 0.8 0.001 19.5 0.8 1.3 1 0 0 1 1 1 1 Post-segregation antitoxin CcdA RHH_1 PF01402.21 BAJ49922.1 - 0.0014 18.5 2.0 0.0014 18.5 2.0 2.4 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family PSK_trans_fac PF07704.11 BAJ49922.1 - 0.0058 17.4 6.8 0.0066 17.2 6.8 1.1 1 0 0 1 1 1 1 Rv0623-like transcription factor ALMT PF11744.8 BAJ49922.1 - 0.011 14.6 0.3 0.011 14.5 0.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter RHH_3 PF12651.7 BAJ49922.1 - 0.015 15.2 0.5 0.015 15.2 0.5 1.6 2 0 0 2 2 2 0 Ribbon-helix-helix domain RHH_5 PF07878.11 BAJ49922.1 - 0.042 13.7 0.8 0.042 13.7 0.8 1.6 2 0 0 2 2 2 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 DUF5357 PF17310.2 BAJ49922.1 - 0.059 11.9 0.4 0.064 11.8 0.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) XhlA PF10779.9 BAJ49922.1 - 0.1 12.8 2.4 0.13 12.5 0.7 1.8 2 0 0 2 2 2 0 Haemolysin XhlA MCM6_C PF18263.1 BAJ49922.1 - 0.14 12.4 3.6 0.14 12.4 3.6 1.0 1 0 0 1 1 1 0 MCM6 C-terminal winged-helix domain G-gamma PF00631.22 BAJ49922.1 - 1.7 8.7 6.2 0.32 11.0 0.5 2.1 1 1 1 2 2 2 0 GGL domain Nitrate_red_del PF02613.15 BAJ49923.1 - 6.3e-07 29.5 0.0 1.2e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 Nitrate reductase delta subunit TIP120 PF08623.10 BAJ49923.1 - 0.12 12.2 0.0 0.21 11.4 0.0 1.5 1 1 0 1 1 1 0 TATA-binding protein interacting (TIP20) Molybdopterin PF00384.22 BAJ49924.1 - 3.4e-24 85.6 0.0 2e-19 69.9 0.0 2.8 2 1 0 2 2 2 2 Molybdopterin oxidoreductase Molydop_binding PF01568.21 BAJ49924.1 - 5.2e-11 42.5 0.0 1.5e-10 41.1 0.0 1.7 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 BAJ49924.1 - 2.4e-07 30.6 1.7 5.1e-06 26.4 1.7 2.4 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain NrfD PF03916.14 BAJ49925.1 - 5.1e-44 151.2 22.8 5.1e-44 151.2 22.8 1.3 2 0 0 2 2 2 1 Polysulphide reductase, NrfD DUF3464 PF11947.8 BAJ49925.1 - 0.044 13.5 2.9 0.083 12.6 2.3 1.7 2 0 0 2 2 2 0 Photosynthesis affected mutant 68 Fer4_11 PF13247.6 BAJ49926.1 - 1.9e-26 92.1 9.4 1.9e-26 92.1 9.4 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 BAJ49926.1 - 4.9e-16 59.1 28.4 3.1e-08 34.1 9.4 3.3 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 BAJ49926.1 - 1.6e-13 49.9 32.9 5.7e-05 23.0 2.4 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.27 BAJ49926.1 - 2.5e-12 46.1 44.6 7.8e-07 28.7 3.8 6.0 5 1 0 5 5 5 4 4Fe-4S binding domain Fer4_10 PF13237.6 BAJ49926.1 - 3e-12 46.5 27.3 2.1e-06 27.7 10.3 3.4 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ49926.1 - 3.1e-11 43.2 25.5 3e-05 24.1 11.7 3.2 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 BAJ49926.1 - 5.2e-11 42.1 45.7 3.1e-05 23.9 3.9 5.4 5 1 0 5 5 5 4 4Fe-4S binding domain Fer4_3 PF12798.7 BAJ49926.1 - 1.2e-09 38.4 47.2 0.0031 18.3 5.5 4.6 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_16 PF13484.6 BAJ49926.1 - 8.8e-06 26.6 23.6 0.63 11.0 1.3 4.5 4 1 0 4 4 4 4 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 BAJ49926.1 - 9.8e-05 22.8 21.3 0.33 11.5 5.7 4.5 3 1 2 5 5 5 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 BAJ49926.1 - 0.00016 21.9 36.3 0.057 13.9 3.4 4.6 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 BAJ49926.1 - 0.00048 20.5 30.8 1 9.9 11.7 4.2 2 2 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 BAJ49926.1 - 0.00065 19.8 29.6 0.024 14.7 9.1 3.7 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 BAJ49926.1 - 1.4 9.7 22.9 1.2 9.9 0.6 3.9 3 1 0 3 3 3 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 BAJ49926.1 - 3.4 8.6 20.5 0.16 12.9 2.6 3.7 3 1 1 4 4 4 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 BAJ49926.1 - 5 6.9 24.6 1.1 9.0 3.5 4.1 2 1 2 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ribosom_S12_S23 PF00164.25 BAJ49927.1 - 7.8e-45 151.2 0.2 9.7e-45 150.9 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Mob_synth_C PF06463.13 BAJ49928.1 - 2.3e-33 114.9 0.0 3.6e-33 114.2 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 BAJ49928.1 - 1.1e-30 107.2 0.1 2.1e-30 106.3 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 BAJ49928.1 - 6.1e-07 29.8 0.0 1e-06 29.1 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 BAJ49928.1 - 3.5e-06 27.1 0.0 6.9e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Cytochrome_B PF00033.19 BAJ49929.1 - 1.8e-32 112.7 11.3 1.8e-32 112.7 11.3 2.6 3 0 0 3 3 3 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 BAJ49929.1 - 8.6e-27 94.2 9.7 8.6e-27 94.2 9.7 2.9 4 1 0 4 4 4 1 Cytochrome b(N-terminal)/b6/petB Cytochrom_B_C PF00032.17 BAJ49929.1 - 9e-07 29.1 2.0 9e-07 29.1 2.0 3.1 4 1 1 5 5 5 1 Cytochrome b(C-terminal)/b6/petD DUF4405 PF14358.6 BAJ49929.1 - 1.9e-05 25.1 1.4 1.9e-05 25.1 1.4 4.3 6 1 0 6 6 6 1 Domain of unknown function (DUF4405) PT-TG PF14449.6 BAJ49929.1 - 0.049 13.5 0.2 0.21 11.5 0.2 2.1 1 0 0 1 1 1 0 Pre-toxin TG OTCace_N PF02729.21 BAJ49930.1 - 3.2e-41 140.8 0.0 6.1e-41 139.9 0.0 1.5 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 BAJ49930.1 - 2.8e-28 99.0 0.0 2e-27 96.2 0.0 2.0 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TPP_enzyme_C PF02775.21 BAJ49932.1 - 8.8e-19 67.8 0.0 1.3e-18 67.3 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 BAJ49933.1 - 2e-56 191.3 0.0 2.6e-56 191.0 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 BAJ49933.1 - 5.2e-24 84.5 0.1 8.3e-24 83.8 0.1 1.3 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 BAJ49933.1 - 0.0021 17.9 0.0 0.0042 17.0 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain POR PF01558.18 BAJ49934.1 - 8.5e-27 94.3 0.0 1.1e-26 94.0 0.0 1.1 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Fer4 PF00037.27 BAJ49934.1 - 7.2e-12 44.6 16.3 9.2e-06 25.3 4.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 BAJ49934.1 - 8.3e-08 32.3 10.0 1.4e-07 31.5 10.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 BAJ49934.1 - 5.1e-07 29.5 15.4 0.00046 20.2 3.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 BAJ49934.1 - 9.6e-07 28.5 14.2 0.0027 17.7 3.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 BAJ49934.1 - 1.9e-06 28.4 10.3 3.7e-06 27.4 10.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 BAJ49934.1 - 4.9e-06 27.4 8.6 0.0047 17.8 0.9 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 BAJ49934.1 - 2e-05 24.7 9.3 3.2e-05 24.0 9.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ49934.1 - 9.2e-05 22.5 10.8 0.00043 20.3 11.2 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 BAJ49934.1 - 0.024 15.4 10.7 0.72 10.6 1.0 2.8 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_4 PF12800.7 BAJ49934.1 - 0.063 13.8 3.7 0.063 13.8 3.7 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 BAJ49934.1 - 0.54 10.8 11.5 4.8 7.8 2.6 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 BAJ49934.1 - 0.61 10.6 12.6 3 8.4 2.8 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 BAJ49934.1 - 0.93 10.1 10.3 0.89 10.2 1.2 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I ATP-grasp_5 PF13549.6 BAJ49935.1 - 2.4e-50 171.1 0.0 4.4e-50 170.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 BAJ49935.1 - 2e-41 141.0 1.4 2e-41 141.0 1.4 2.1 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 BAJ49935.1 - 1.2e-18 67.7 0.4 3.4e-17 63.0 0.4 2.7 2 0 0 2 2 2 1 CoA binding domain CoA_binding PF02629.19 BAJ49935.1 - 3.9e-09 37.1 0.1 3.2e-06 27.7 0.1 3.1 2 0 0 2 2 2 2 CoA binding domain F420_oxidored PF03807.17 BAJ49935.1 - 0.019 15.5 0.1 0.068 13.8 0.1 1.9 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.23 BAJ49935.1 - 0.11 12.4 0.1 0.4 10.6 0.0 2.0 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DUF350 PF03994.14 BAJ49936.1 - 0.00044 20.4 9.1 0.0036 17.4 1.0 2.9 2 1 0 2 2 2 2 Domain of Unknown Function (DUF350) DUF4179 PF13786.6 BAJ49938.1 - 4.2e-05 23.9 0.0 0.00014 22.2 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4179) DUF834 PF05754.14 BAJ49938.1 - 0.011 15.7 0.2 0.023 14.7 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF834) DZR PF12773.7 BAJ49938.1 - 0.064 13.3 0.7 0.1 12.7 0.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-HIT PF04438.16 BAJ49938.1 - 1.1 9.1 4.0 1.7 8.6 4.0 1.3 1 0 0 1 1 1 0 HIT zinc finger Rubredoxin_2 PF18073.1 BAJ49938.1 - 1.9 8.3 4.8 20 5.0 0.6 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain SKG6 PF08693.10 BAJ49938.1 - 5.9 6.4 13.1 0.89 9.0 4.1 2.7 2 0 0 2 2 2 0 Transmembrane alpha-helix domain VPS13 PF16908.5 BAJ49939.1 - 0.023 14.5 0.0 0.039 13.7 0.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting-associated protein 13, N-terminal Peptidase_M6 PF05547.11 BAJ49939.1 - 0.043 12.2 6.8 0.48 8.7 0.9 2.7 2 1 1 3 3 3 0 Immune inhibitor A peptidase M6 RimK PF08443.11 BAJ49940.1 - 1.3e-30 106.4 0.0 1.8e-30 106.0 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 BAJ49940.1 - 3.2e-08 33.2 0.0 4.8e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 BAJ49940.1 - 4.2e-05 23.6 0.0 6.7e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 BAJ49940.1 - 0.001 18.7 0.0 0.0018 17.9 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 BAJ49940.1 - 0.0035 16.9 0.0 0.0069 15.9 0.0 1.5 2 0 0 2 2 2 1 D-ala D-ala ligase C-terminus R2K_3 PF14243.6 BAJ49940.1 - 0.014 15.4 0.1 0.025 14.6 0.1 1.4 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 ATPgrasp_ST PF14397.6 BAJ49940.1 - 0.1 11.8 0.0 0.7 9.1 0.0 2.1 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp Peptidase_M54 PF07998.11 BAJ49941.1 - 6.6e-25 88.2 0.0 8.9e-25 87.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M54 Peptidase_M10 PF00413.24 BAJ49941.1 - 0.00074 19.4 0.0 0.00076 19.4 0.0 1.2 1 0 0 1 1 1 1 Matrixin Peptidase_M66 PF10462.9 BAJ49941.1 - 0.0028 16.7 0.1 0.0041 16.1 0.1 1.2 1 0 0 1 1 1 1 Peptidase M66 Reprolysin_3 PF13582.6 BAJ49941.1 - 0.032 14.7 0.0 0.046 14.3 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.8 BAJ49941.1 - 0.035 12.7 0.2 0.054 12.1 0.2 1.2 1 0 0 1 1 1 0 Putative peptidase family AAA_18 PF13238.6 BAJ49942.1 - 7.6e-16 58.8 0.3 1.9e-15 57.5 0.3 1.7 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 BAJ49942.1 - 2.2e-06 27.9 0.0 1.8e-05 24.9 0.0 2.1 2 0 0 2 2 2 1 Shikimate kinase AAA PF00004.29 BAJ49942.1 - 2.5e-06 27.9 0.3 4.1e-05 24.0 0.3 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 BAJ49942.1 - 0.00021 21.5 0.7 0.0054 16.9 0.2 2.4 1 1 1 2 2 2 1 AAA domain AAA_28 PF13521.6 BAJ49942.1 - 0.00064 20.0 0.1 0.0013 18.9 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 BAJ49942.1 - 0.0015 18.8 0.2 0.002 18.4 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ49942.1 - 0.0022 18.4 0.4 0.2 12.0 0.0 2.3 2 1 0 2 2 2 1 AAA ATPase domain dNK PF01712.19 BAJ49942.1 - 0.0028 17.6 0.0 0.12 12.3 0.0 2.2 2 0 0 2 2 2 1 Deoxynucleoside kinase AAA_17 PF13207.6 BAJ49942.1 - 0.0067 16.9 0.2 0.017 15.6 0.2 1.9 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 BAJ49942.1 - 0.008 16.3 0.1 0.022 14.9 0.0 1.8 1 1 1 2 2 2 1 Cytidylate kinase-like family PRK PF00485.18 BAJ49942.1 - 0.016 15.0 0.1 2.6 7.7 0.0 3.0 3 0 0 3 3 3 0 Phosphoribulokinase / Uridine kinase family RNA_helicase PF00910.22 BAJ49942.1 - 0.017 15.5 0.0 0.031 14.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase TsaE PF02367.17 BAJ49942.1 - 0.05 13.6 0.1 0.14 12.2 0.0 1.8 2 1 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 BAJ49942.1 - 0.059 13.3 0.0 0.09 12.7 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_24 PF13479.6 BAJ49942.1 - 0.074 12.8 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 BAJ49942.1 - 0.074 12.8 0.0 0.12 12.1 0.0 1.3 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NTPase_1 PF03266.15 BAJ49942.1 - 0.58 10.0 4.9 0.26 11.2 0.7 2.3 2 1 1 3 3 3 0 NTPase ABC_tran PF00005.27 BAJ49943.1 - 1.9e-42 145.1 0.0 4.1e-21 75.9 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 BAJ49943.1 - 8.8e-14 52.0 6.8 0.00039 20.3 0.0 4.2 2 2 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ49943.1 - 4.4e-11 42.6 1.7 0.0052 16.3 0.0 4.1 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain Fer4 PF00037.27 BAJ49943.1 - 2.9e-07 30.0 3.5 2.9e-07 30.0 3.5 2.3 3 0 0 3 3 1 1 4Fe-4S binding domain AAA_33 PF13671.6 BAJ49943.1 - 1.7e-06 28.2 0.0 0.28 11.3 0.0 3.6 2 2 0 2 2 2 2 AAA domain RLI PF04068.15 BAJ49943.1 - 2.5e-06 27.2 1.9 5.7e-06 26.1 1.9 1.7 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Fer4_6 PF12837.7 BAJ49943.1 - 3.7e-06 26.8 12.1 0.00026 20.9 2.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain AAA_15 PF13175.6 BAJ49943.1 - 2.7e-05 24.1 0.0 0.88 9.2 0.0 3.2 3 0 0 3 3 3 2 AAA ATPase domain Fer4_2 PF12797.7 BAJ49943.1 - 7.3e-05 22.6 11.4 0.014 15.5 1.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain AAA_24 PF13479.6 BAJ49943.1 - 0.00013 21.8 0.1 0.14 11.9 0.0 2.4 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.22 BAJ49943.1 - 0.00021 20.6 0.3 0.021 14.0 0.0 2.4 2 1 0 2 2 2 1 NB-ARC domain AAA PF00004.29 BAJ49943.1 - 0.00038 20.9 0.0 0.49 10.8 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Fer4_9 PF13187.6 BAJ49943.1 - 0.00071 19.7 5.6 0.0016 18.6 5.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain AAA_23 PF13476.6 BAJ49943.1 - 0.00084 19.9 0.2 0.53 10.7 0.1 2.6 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 BAJ49943.1 - 0.00094 18.8 1.0 0.024 14.2 0.0 2.9 3 1 0 3 3 3 1 AAA domain Fer4_7 PF12838.7 BAJ49943.1 - 0.0017 18.9 6.3 0.003 18.1 0.3 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain RNA_helicase PF00910.22 BAJ49943.1 - 0.002 18.5 0.0 2.4 8.6 0.0 2.5 2 0 0 2 2 2 1 RNA helicase Fer4_21 PF14697.6 BAJ49943.1 - 0.0036 17.4 7.2 0.0061 16.7 7.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ49943.1 - 0.0048 17.0 11.0 0.0076 16.3 1.7 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain RsgA_GTPase PF03193.16 BAJ49943.1 - 0.0049 16.8 0.1 1.5 8.7 0.0 2.5 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 BAJ49943.1 - 0.0053 16.5 0.0 1.8 8.4 0.0 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 BAJ49943.1 - 0.0073 16.6 0.6 1.7 8.9 0.0 2.9 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 BAJ49943.1 - 0.008 16.7 1.1 18 5.9 0.0 3.6 2 2 0 3 3 3 0 AAA domain AAA_16 PF13191.6 BAJ49943.1 - 0.013 15.9 1.2 4.8 7.5 0.1 3.0 2 2 0 2 2 2 0 AAA ATPase domain Rad17 PF03215.15 BAJ49943.1 - 0.014 15.3 0.0 1.1 9.1 0.0 2.4 2 0 0 2 2 2 0 Rad17 P-loop domain Fer4_16 PF13484.6 BAJ49943.1 - 0.015 16.2 0.3 0.015 16.2 0.3 2.3 2 0 0 2 2 1 0 4Fe-4S double cluster binding domain NACHT PF05729.12 BAJ49943.1 - 0.016 15.1 3.1 1.3 8.9 0.0 2.4 2 0 0 2 2 2 0 NACHT domain IstB_IS21 PF01695.17 BAJ49943.1 - 0.016 14.9 0.1 0.23 11.2 0.0 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein RuvB_N PF05496.12 BAJ49943.1 - 0.023 14.4 1.4 0.47 10.2 0.0 3.0 4 0 0 4 4 3 0 Holliday junction DNA helicase RuvB P-loop domain SbcCD_C PF13558.6 BAJ49943.1 - 0.066 13.5 0.1 19 5.6 0.0 3.2 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_14 PF13173.6 BAJ49943.1 - 0.075 13.1 0.3 13 5.9 0.0 3.1 4 0 0 4 4 3 0 AAA domain AAA_28 PF13521.6 BAJ49943.1 - 0.085 13.1 0.1 27 5.0 0.0 3.2 3 0 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 BAJ49943.1 - 0.12 12.2 2.7 12 5.7 0.2 3.7 4 0 0 4 4 4 0 NTPase Fer4_8 PF13183.6 BAJ49943.1 - 0.21 12.0 0.1 0.21 12.0 0.1 2.0 2 0 0 2 2 1 0 4Fe-4S dicluster domain MeaB PF03308.16 BAJ49943.1 - 0.31 10.0 1.0 2.9 6.8 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 BAJ49943.1 - 0.34 10.5 2.6 3.9 7.1 0.1 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MukB PF04310.12 BAJ49943.1 - 0.71 9.6 2.0 2.8 7.7 0.0 2.6 2 1 1 3 3 3 0 MukB N-terminal Fer4_17 PF13534.6 BAJ49943.1 - 1.4 9.5 6.6 0.27 11.8 1.8 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 BAJ49943.1 - 2.5 8.9 5.3 5.2 7.9 0.9 2.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain AAA PF00004.29 BAJ49944.1 - 3.4e-101 334.9 0.0 1.1e-49 168.2 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAJ49944.1 - 7e-35 118.6 3.0 1.4e-17 63.2 0.5 2.6 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 BAJ49944.1 - 6.9e-31 106.3 0.1 3.8e-30 103.9 0.3 2.2 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain CDC48_2 PF02933.17 BAJ49944.1 - 1.4e-14 53.6 0.6 5.4e-14 51.7 0.6 2.0 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 RuvB_N PF05496.12 BAJ49944.1 - 1.9e-14 53.7 0.0 9e-07 28.8 0.0 2.9 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 BAJ49944.1 - 2e-14 54.1 0.0 1.1e-06 28.9 0.0 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 BAJ49944.1 - 8.5e-14 52.3 1.4 3e-05 24.5 0.0 3.9 3 2 0 4 4 3 2 AAA ATPase domain TIP49 PF06068.13 BAJ49944.1 - 7.9e-12 45.0 0.2 0.00014 21.2 0.0 2.8 3 0 0 3 3 2 2 TIP49 P-loop domain AAA_22 PF13401.6 BAJ49944.1 - 9.6e-11 42.1 0.8 0.0061 16.8 0.1 4.0 2 2 1 3 3 3 2 AAA domain AAA_5 PF07728.14 BAJ49944.1 - 1.7e-10 41.0 0.3 0.00036 20.5 0.0 3.7 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 BAJ49944.1 - 1.1e-09 38.6 0.0 0.0012 19.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 BAJ49944.1 - 6.1e-09 36.0 0.0 0.00047 20.2 0.0 2.4 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 BAJ49944.1 - 5.5e-08 32.7 0.0 0.013 15.3 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_18 PF13238.6 BAJ49944.1 - 1.3e-07 32.2 0.0 0.014 16.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 BAJ49944.1 - 1.9e-07 31.4 0.0 0.019 15.4 0.0 2.5 2 0 0 2 2 2 2 RNA helicase AAA_28 PF13521.6 BAJ49944.1 - 4.4e-07 30.3 0.0 0.023 15.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 BAJ49944.1 - 5.7e-07 29.1 0.1 0.026 13.9 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 BAJ49944.1 - 1.9e-06 27.7 0.0 0.09 12.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 BAJ49944.1 - 6.5e-06 26.0 0.0 0.098 12.4 0.0 2.7 2 1 0 2 2 2 2 Sigma-54 interaction domain Parvo_NS1 PF01057.17 BAJ49944.1 - 8.6e-06 25.0 0.1 0.038 13.1 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 TsaE PF02367.17 BAJ49944.1 - 1.1e-05 25.4 0.0 0.25 11.4 0.0 2.6 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 BAJ49944.1 - 1.2e-05 25.8 0.0 0.11 13.0 0.0 2.5 2 0 0 2 2 2 2 ABC transporter DUF815 PF05673.13 BAJ49944.1 - 1.9e-05 24.0 0.0 0.049 12.8 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Zeta_toxin PF06414.12 BAJ49944.1 - 1.9e-05 24.0 0.0 0.11 11.7 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin ATPase PF06745.13 BAJ49944.1 - 2e-05 24.0 0.2 0.096 12.0 0.0 3.3 2 1 0 3 3 3 2 KaiC Vps4_C PF09336.10 BAJ49944.1 - 2.1e-05 24.4 0.1 0.38 10.8 0.0 2.8 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain DUF2075 PF09848.9 BAJ49944.1 - 2.7e-05 23.6 0.0 0.076 12.2 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 BAJ49944.1 - 2.9e-05 23.7 0.0 0.23 10.9 0.0 2.6 2 1 0 2 2 2 2 P-loop containing dynein motor region NACHT PF05729.12 BAJ49944.1 - 4.3e-05 23.5 0.2 0.84 9.5 0.0 3.4 3 0 0 3 3 3 2 NACHT domain PhoH PF02562.16 BAJ49944.1 - 7e-05 22.4 0.3 0.37 10.2 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein AAA_25 PF13481.6 BAJ49944.1 - 0.00014 21.5 4.6 1 8.9 0.1 4.0 2 2 0 4 4 4 2 AAA domain AAA_3 PF07726.11 BAJ49944.1 - 0.00016 21.6 0.0 0.69 9.8 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 BAJ49944.1 - 0.0002 21.4 0.3 2.3 8.1 0.0 3.7 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea AAA_30 PF13604.6 BAJ49944.1 - 0.00023 21.0 0.1 0.57 9.9 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_17 PF13207.6 BAJ49944.1 - 0.00032 21.1 0.0 0.56 10.6 0.0 2.7 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 BAJ49944.1 - 0.00047 19.4 0.1 0.76 8.9 0.0 2.6 3 0 0 3 3 2 2 NB-ARC domain AAA_19 PF13245.6 BAJ49944.1 - 0.00048 20.5 0.7 1.1 9.6 0.2 2.9 2 1 1 3 3 2 1 AAA domain AAA_11 PF13086.6 BAJ49944.1 - 0.00048 20.0 0.0 0.55 10.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain NTPase_1 PF03266.15 BAJ49944.1 - 0.0018 18.2 1.6 5 7.0 0.0 3.8 3 1 1 4 4 3 0 NTPase Cytidylate_kin PF02224.18 BAJ49944.1 - 0.004 16.9 0.2 2.6 7.7 0.0 2.6 2 0 0 2 2 2 1 Cytidylate kinase Bac_DnaA PF00308.18 BAJ49944.1 - 0.0048 16.8 0.0 4.1 7.2 0.0 2.8 3 1 0 3 3 2 0 Bacterial dnaA protein IPT PF01745.16 BAJ49944.1 - 0.0048 16.3 0.1 0.9 8.9 0.0 2.5 2 0 0 2 2 2 1 Isopentenyl transferase Cytidylate_kin2 PF13189.6 BAJ49944.1 - 0.0096 16.1 0.0 1.2 9.2 0.0 2.3 2 0 0 2 2 2 1 Cytidylate kinase-like family Guanylate_kin PF00625.21 BAJ49944.1 - 0.011 15.4 1.0 9.4 5.9 0.0 4.2 3 2 2 5 5 5 0 Guanylate kinase Sigma54_activ_2 PF14532.6 BAJ49944.1 - 0.016 15.3 0.0 4.5 7.4 0.0 2.6 2 0 0 2 2 2 0 Sigma-54 interaction domain AFG1_ATPase PF03969.16 BAJ49944.1 - 0.018 14.0 0.0 6.3 5.6 0.0 3.0 3 0 0 3 3 3 0 AFG1-like ATPase TniB PF05621.11 BAJ49944.1 - 0.02 14.3 0.0 12 5.3 0.0 3.3 2 1 1 3 3 3 0 Bacterial TniB protein SKI PF01202.22 BAJ49944.1 - 0.027 14.6 0.0 4.2 7.5 0.0 2.5 2 0 0 2 2 2 0 Shikimate kinase ResIII PF04851.15 BAJ49944.1 - 0.032 14.2 0.0 8.9 6.3 0.0 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Rad17 PF03215.15 BAJ49944.1 - 0.035 14.0 0.0 18 5.2 0.0 2.9 2 1 1 3 3 3 0 Rad17 P-loop domain Hydin_ADK PF17213.3 BAJ49944.1 - 0.044 14.1 0.0 2.4 8.4 0.0 2.4 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain DUF3420 PF11900.8 BAJ49944.1 - 0.057 13.6 0.2 0.19 11.9 0.2 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF3420) DAP3 PF10236.9 BAJ49944.1 - 0.17 11.0 0.0 19 4.3 0.0 2.4 2 1 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AAA_6 PF12774.7 BAJ49944.1 - 0.19 10.7 0.0 2.4 7.0 0.0 2.3 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region Snf7 PF03357.21 BAJ49945.1 - 9.6e-09 35.1 3.1 1.2e-08 34.7 3.1 1.3 1 1 0 1 1 1 1 Snf7 MCC-bdg_PDZ PF10506.9 BAJ49945.1 - 0.0024 17.9 1.0 0.05 13.6 1.2 2.6 1 1 1 2 2 2 1 PDZ domain of MCC-2 bdg protein for Usher syndrome LOH1CR12 PF10158.9 BAJ49945.1 - 0.0059 16.6 3.1 0.013 15.5 1.2 2.1 1 1 1 2 2 2 1 Tumour suppressor protein DUF948 PF06103.11 BAJ49945.1 - 0.017 15.4 0.7 0.18 12.1 0.0 2.6 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Peptidase_S49_N PF08496.10 BAJ49945.1 - 0.04 14.0 1.0 0.11 12.6 1.0 1.8 1 1 0 1 1 1 0 Peptidase family S49 N-terminal Acetyltransf_11 PF13720.6 BAJ49945.1 - 0.088 13.3 0.3 0.4 11.2 0.1 2.3 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DASH_Duo1 PF08651.10 BAJ49945.1 - 0.12 12.2 1.3 1.6 8.5 0.2 2.8 2 1 0 2 2 2 0 DASH complex subunit Duo1 Jnk-SapK_ap_N PF09744.9 BAJ49945.1 - 0.15 12.2 8.4 0.069 13.4 5.1 1.9 2 1 0 2 2 2 0 JNK_SAPK-associated protein-1 UPF0449 PF15136.6 BAJ49945.1 - 0.47 10.9 4.5 0.69 10.4 1.3 2.6 2 1 1 3 3 3 0 Uncharacterised protein family UPF0449 Peripla_BP_2 PF01497.18 BAJ49946.1 - 2.1e-15 57.0 0.0 5.1e-15 55.7 0.0 1.6 1 1 0 1 1 1 1 Periplasmic binding protein BacA PF02673.18 BAJ49947.1 - 3e-45 154.9 15.5 3.6e-45 154.7 15.5 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA KH_1 PF00013.29 BAJ49948.1 - 7.6e-13 48.1 1.3 1.2e-06 28.2 0.1 2.4 2 0 0 2 2 2 2 KH domain KH_8 PF17903.1 BAJ49948.1 - 5.5e-05 23.2 0.0 8.1e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Krr1 KH1 domain KH_2 PF07650.17 BAJ49948.1 - 0.00064 19.5 0.7 0.069 13.0 0.1 2.3 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 BAJ49948.1 - 0.49 10.3 3.2 5.8 6.9 0.1 2.9 2 2 0 2 2 2 0 KH domain BON PF04972.17 BAJ49948.1 - 0.79 10.1 3.7 1.7 9.0 0.5 2.3 2 0 0 2 2 2 0 BON domain RIO1 PF01163.22 BAJ49949.1 - 3.2e-53 180.2 0.0 4.7e-53 179.6 0.0 1.2 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 BAJ49949.1 - 2e-08 34.5 2.5 2.1e-06 27.8 0.0 3.1 2 1 1 3 3 3 2 Phosphotransferase enzyme family Pkinase PF00069.25 BAJ49949.1 - 4.5e-05 23.0 0.0 0.0001 21.8 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 BAJ49949.1 - 0.00062 19.2 0.0 0.24 10.7 0.0 2.2 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_Tyr PF07714.17 BAJ49949.1 - 0.055 12.7 0.0 0.088 12.1 0.0 1.5 1 1 0 1 1 1 0 Protein tyrosine kinase Fructosamin_kin PF03881.14 BAJ49949.1 - 0.16 11.2 0.0 0.28 10.3 0.0 1.4 1 0 0 1 1 1 0 Fructosamine kinase Acylphosphatase PF00708.18 BAJ49950.1 - 4.8e-17 62.1 0.1 9.3e-17 61.2 0.1 1.4 1 0 0 1 1 1 1 Acylphosphatase Halo_GVPC PF05465.13 BAJ49950.1 - 0.0017 18.6 2.5 0.0033 17.6 2.5 1.5 1 0 0 1 1 1 1 Halobacterial gas vesicle protein C (GVPC) repeat Apolipoprotein PF01442.18 BAJ49950.1 - 0.01 15.8 3.7 0.12 12.2 3.6 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain TPR_MLP1_2 PF07926.12 BAJ49950.1 - 0.024 14.7 0.3 0.033 14.3 0.3 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein CENP-H PF05837.12 BAJ49950.1 - 0.055 13.9 0.1 0.091 13.2 0.1 1.3 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF713 PF05218.14 BAJ49950.1 - 0.057 13.1 0.6 0.082 12.6 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF713) YkyA PF10368.9 BAJ49950.1 - 0.066 12.9 1.2 0.097 12.3 1.2 1.2 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein TetR_C_24 PF17932.1 BAJ49950.1 - 0.11 12.8 2.3 0.21 11.8 1.2 1.9 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain FapA PF03961.13 BAJ49950.1 - 0.12 10.9 0.3 0.16 10.5 0.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4085 PF13315.6 BAJ49950.1 - 0.42 10.2 3.7 0.21 11.2 1.6 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4085) SCO1-SenC PF02630.14 BAJ49952.1 - 4.9e-44 149.5 0.0 6e-44 149.2 0.0 1.1 1 0 0 1 1 1 1 SCO1/SenC AhpC-TSA PF00578.21 BAJ49952.1 - 7.7e-12 45.2 0.0 1.1e-11 44.7 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 BAJ49952.1 - 4.1e-08 33.1 0.0 4.7e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 BAJ49952.1 - 0.0002 21.6 0.0 0.00032 21.0 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like PA PF02225.22 BAJ49952.1 - 0.051 13.6 1.8 7.7 6.6 1.7 2.4 1 1 1 2 2 2 0 PA domain Ribonuc_red_lgC PF02867.15 BAJ49953.1 - 1.1e-179 598.4 0.0 1.8e-179 597.7 0.0 1.4 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 BAJ49953.1 - 3e-23 81.6 0.1 1.1e-22 79.8 0.1 2.1 1 1 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 BAJ49953.1 - 2.8e-17 63.1 1.0 9.6e-17 61.3 1.0 2.0 1 0 0 1 1 1 1 ATP cone domain NRDD PF13597.6 BAJ49953.1 - 0.34 9.6 0.0 0.34 9.6 0.0 2.2 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase OsmC PF02566.19 BAJ49954.1 - 1.3e-19 70.5 0.4 1.6e-19 70.2 0.4 1.1 1 0 0 1 1 1 1 OsmC-like protein MORN PF02493.20 BAJ49954.1 - 0.04 13.8 0.1 0.071 13.0 0.1 1.4 1 0 0 1 1 1 0 MORN repeat DUF192 PF02643.15 BAJ49955.1 - 2.8e-35 120.4 0.0 4.3e-35 119.8 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 DUF1905 PF08922.11 BAJ49955.1 - 0.09 12.9 0.0 0.23 11.6 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1905) UPF0051 PF01458.17 BAJ49956.1 - 8.5e-75 251.2 0.1 1.1e-74 250.8 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Ald_Xan_dh_C2 PF02738.18 BAJ49957.1 - 1.6e-153 512.1 0.7 1.6e-153 512.1 0.7 1.4 2 0 0 2 2 2 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ49957.1 - 5.1e-27 94.4 0.1 1.4e-26 93.0 0.1 1.8 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sigma70_r3 PF04539.16 BAJ49957.1 - 0.064 13.4 0.6 7.2 6.8 0.1 3.7 4 0 0 4 4 4 0 Sigma-70 region 3 Aminotran_5 PF00266.19 BAJ49958.1 - 1e-43 149.7 0.0 1.3e-43 149.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 BAJ49958.1 - 3.6e-07 29.7 0.0 5.8e-07 29.0 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 BAJ49958.1 - 0.00028 19.5 0.0 0.00047 18.8 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 BAJ49958.1 - 0.0012 18.2 0.0 0.0016 17.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 BAJ49958.1 - 0.048 13.0 0.1 0.081 12.2 0.1 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family DUF2850 PF11012.8 BAJ49958.1 - 0.058 13.7 0.0 0.09 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2850) SHMT PF00464.19 BAJ49958.1 - 0.11 11.1 0.0 2.1 6.8 0.0 2.1 2 0 0 2 2 2 0 Serine hydroxymethyltransferase MaoC_dehydratas PF01575.19 BAJ49959.1 - 9.8e-18 63.9 0.0 1.2e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 BAJ49959.1 - 1.4e-08 35.0 0.0 2.4e-08 34.2 0.0 1.4 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase 4HBT PF03061.22 BAJ49959.1 - 0.003 17.9 0.0 0.0057 17.0 0.0 1.4 1 0 0 1 1 1 1 Thioesterase superfamily tRNA_SAD PF07973.14 BAJ49960.1 - 3.5e-09 36.6 0.2 6.7e-09 35.7 0.2 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain tRNA-synt_2c PF01411.19 BAJ49960.1 - 3.7e-08 32.3 0.0 5.1e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) MMR_HSR1_C PF08438.10 BAJ49961.1 - 1.3e-31 109.5 0.1 3.1e-31 108.2 0.0 1.7 2 0 0 2 2 2 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 BAJ49961.1 - 1.5e-22 79.8 0.0 4.7e-21 75.0 0.0 2.9 2 1 1 3 3 3 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAJ49961.1 - 1.9e-08 34.0 1.0 7.6e-05 22.3 0.1 3.4 2 1 0 2 2 2 2 Ferrous iron transport protein B TGS PF02824.21 BAJ49961.1 - 1.1e-07 31.8 0.0 2.1e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 TGS domain Dynamin_N PF00350.23 BAJ49961.1 - 0.00091 19.3 0.0 0.14 12.2 0.0 2.4 2 0 0 2 2 2 1 Dynamin family GTP_EFTU PF00009.27 BAJ49961.1 - 0.018 14.6 1.5 7.7 6.0 0.0 3.0 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain SRPRB PF09439.10 BAJ49961.1 - 0.13 11.7 0.0 1.3 8.4 0.0 2.4 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Arf PF00025.21 BAJ49961.1 - 0.14 11.6 0.5 9 5.7 0.0 2.9 3 0 0 3 3 3 0 ADP-ribosylation factor family LexA_DNA_bind PF01726.16 BAJ49961.1 - 0.17 11.7 0.0 8.5 6.2 0.0 2.8 2 0 0 2 2 2 0 LexA DNA binding domain Carb_kinase PF01256.17 BAJ49962.1 - 5.9e-45 153.6 0.6 6.8e-45 153.4 0.6 1.0 1 0 0 1 1 1 1 Carbohydrate kinase HK PF02110.15 BAJ49962.1 - 1.1e-08 34.8 0.1 1.7e-08 34.2 0.1 1.2 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 BAJ49962.1 - 8.5e-05 22.0 0.0 0.00017 21.1 0.0 1.5 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase Alba PF01918.21 BAJ49964.1 - 1.8e-13 50.1 0.9 2.7e-13 49.5 0.9 1.3 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 BAJ49964.1 - 0.023 14.7 2.3 0.058 13.4 0.6 2.0 1 1 1 2 2 2 0 Rpp20 subunit of nuclear RNase MRP and P Ras PF00071.22 BAJ49965.1 - 7.2e-16 58.2 0.0 5.9e-13 48.7 0.0 2.0 2 0 0 2 2 2 2 Ras family Roc PF08477.13 BAJ49965.1 - 7.5e-05 22.9 0.0 0.016 15.4 0.1 2.2 1 1 1 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 BAJ49965.1 - 0.00059 19.9 0.3 0.0032 17.5 0.3 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 BAJ49965.1 - 0.0024 17.5 0.0 0.54 9.8 0.0 2.3 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 BAJ49965.1 - 0.0037 16.8 0.0 0.082 12.4 0.0 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 BAJ49965.1 - 0.0089 15.9 0.1 1.4 8.8 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1_Xtn PF16897.5 BAJ49965.1 - 0.046 13.7 0.0 0.13 12.2 0.0 1.7 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain Ser_hydrolase PF06821.13 BAJ49965.1 - 0.06 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase TackOD1 PF18551.1 BAJ49966.1 - 5.9e-38 130.4 1.0 1.9e-37 128.8 0.2 1.8 2 0 0 2 2 2 1 Thaumarchaeal output domain 1 DZR PF12773.7 BAJ49966.1 - 2.2e-06 27.6 6.9 0.0018 18.2 2.1 2.3 2 0 0 2 2 2 2 Double zinc ribbon HypA PF01155.19 BAJ49966.1 - 0.0001 22.3 7.4 0.11 12.5 0.4 2.6 1 1 1 2 2 2 2 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-CHY PF05495.12 BAJ49966.1 - 0.07 13.6 7.1 0.23 11.9 1.4 2.4 1 1 1 2 2 2 0 CHY zinc finger RecR PF02132.15 BAJ49966.1 - 0.11 12.0 0.2 0.11 12.0 0.2 2.3 3 0 0 3 3 2 0 RecR protein zf-C4pol PF14260.6 BAJ49966.1 - 0.22 12.0 4.9 7 7.2 0.8 2.7 2 1 1 3 3 3 0 C4-type zinc-finger of DNA polymerase delta Zn_Tnp_IS1595 PF12760.7 BAJ49966.1 - 0.42 10.6 18.0 3.6 7.7 6.4 4.3 2 2 2 4 4 4 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 BAJ49966.1 - 0.43 10.7 16.5 12 6.1 3.8 4.5 3 2 1 4 4 4 0 Zinc ribbon domain zf-BED PF02892.15 BAJ49966.1 - 0.83 9.7 6.0 8.6 6.5 0.0 3.1 2 1 1 3 3 3 0 BED zinc finger zf-C2HC5 PF06221.13 BAJ49966.1 - 0.87 9.6 13.1 0.92 9.5 1.1 3.2 2 1 1 3 3 3 0 Putative zinc finger motif, C2HC5-type A2L_zn_ribbon PF08792.10 BAJ49966.1 - 1.1 9.1 0.0 1.1 9.1 0.0 3.6 5 0 0 5 5 4 0 A2L zinc ribbon domain zinc-ribbons_6 PF07191.12 BAJ49966.1 - 1.2 9.2 9.5 16 5.6 1.7 3.0 1 1 1 2 2 2 0 zinc-ribbons zf-Di19 PF05605.12 BAJ49966.1 - 1.9 8.9 4.7 11 6.4 0.2 3.0 2 1 1 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding Ion_trans_2 PF07885.16 BAJ49968.1 - 5.6e-17 61.5 6.9 5.6e-17 61.5 6.9 2.3 3 0 0 3 3 3 1 Ion channel Ion_trans PF00520.31 BAJ49968.1 - 1.2e-13 50.9 6.5 1.6e-13 50.5 6.5 1.1 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 BAJ49968.1 - 4.7e-06 26.5 1.1 0.00038 20.3 0.0 2.2 2 0 0 2 2 2 2 Ligand-gated ion channel IRK PF01007.20 BAJ49968.1 - 0.004 17.0 1.5 0.011 15.5 0.1 2.2 2 1 0 2 2 2 1 Inward rectifier potassium channel transmembrane domain SNARE_assoc PF09335.11 BAJ49968.1 - 0.03 14.8 0.0 0.03 14.8 0.0 2.8 2 1 0 2 2 2 0 SNARE associated Golgi protein MFS_1 PF07690.16 BAJ49969.1 - 2.2e-21 76.2 47.2 3.7e-15 55.7 11.4 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 BAJ49969.1 - 0.00025 20.0 10.5 0.0072 15.2 10.5 2.8 1 1 0 1 1 1 1 MFS_1 like family MFS_3 PF05977.13 BAJ49969.1 - 0.0021 16.6 1.2 0.0021 16.6 1.2 2.3 1 1 0 2 2 2 2 Transmembrane secretion effector PALP PF00291.25 BAJ49970.1 - 1.1e-69 235.0 3.0 1.3e-69 234.9 3.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme LD_cluster3 PF18180.1 BAJ49970.1 - 0.046 13.3 0.0 0.077 12.6 0.0 1.4 1 0 0 1 1 1 0 SLOG cluster3 family eIF-1a PF01176.19 BAJ49971.1 - 2.5e-19 68.8 0.2 3.2e-19 68.5 0.2 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Prot_ATP_ID_OB PF16450.5 BAJ49971.1 - 0.017 15.1 0.0 0.024 14.6 0.0 1.3 1 0 0 1 1 1 0 Proteasomal ATPase OB C-terminal domain GTP_EFTU PF00009.27 BAJ49972.1 - 3.1e-29 101.9 0.0 4.4e-29 101.4 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 BAJ49972.1 - 2.1e-08 34.5 0.3 1e-07 32.2 0.3 2.2 1 1 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 BAJ49972.1 - 3.1e-08 33.9 0.2 1e-07 32.3 0.2 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAJ49972.1 - 0.0024 17.9 0.0 0.015 15.3 0.0 2.2 1 1 0 1 1 1 1 50S ribosome-binding GTPase CheB_methylest PF01339.17 BAJ49972.1 - 0.046 13.4 0.0 0.14 11.9 0.0 1.6 1 1 0 1 1 1 0 CheB methylesterase RsgA_GTPase PF03193.16 BAJ49972.1 - 0.067 13.1 0.1 0.68 9.8 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase ATP_bind_1 PF03029.17 BAJ49972.1 - 0.12 12.1 0.0 0.5 10.1 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AsnC_trans_reg PF01037.21 BAJ49973.1 - 2.1e-13 50.1 0.5 2.2e-13 49.9 0.5 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 BAJ49973.1 - 0.00038 20.4 0.6 0.00052 20.0 0.6 1.2 1 0 0 1 1 1 1 NapD protein ABM PF03992.16 BAJ49973.1 - 0.04 14.0 0.0 0.67 10.1 0.1 2.0 2 0 0 2 2 2 0 Antibiotic biosynthesis monooxygenase Flot PF15975.5 BAJ49973.1 - 0.055 13.7 0.2 0.065 13.4 0.2 1.1 1 0 0 1 1 1 0 Flotillin AsnC_trans_reg PF01037.21 BAJ49974.1 - 9.3e-11 41.6 0.0 1.2e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain UPF0547 PF10571.9 BAJ49974.1 - 1.7e-05 24.8 1.1 3.6e-05 23.7 1.1 1.6 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 BAJ49974.1 - 0.00017 20.9 0.4 0.00026 20.3 0.4 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 BAJ49974.1 - 0.0075 16.0 0.8 0.011 15.4 0.8 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_10 PF10058.9 BAJ49974.1 - 0.01 15.5 0.6 0.17 11.6 0.1 2.4 2 1 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein DZR PF12773.7 BAJ49974.1 - 0.032 14.3 0.3 0.044 13.8 0.3 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-H2C2_2 PF13465.6 BAJ49974.1 - 0.063 13.7 1.5 5.1 7.7 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain HscB_4_cys PF18256.1 BAJ49974.1 - 0.12 12.2 0.2 0.12 12.2 0.2 1.9 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif zf-RanBP PF00641.18 BAJ49974.1 - 0.14 11.5 1.4 0.21 10.9 1.4 1.3 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others RecR PF02132.15 BAJ49974.1 - 0.14 11.7 1.1 0.27 10.8 1.1 1.4 1 0 0 1 1 1 0 RecR protein DUF4471 PF14740.6 BAJ49974.1 - 0.24 10.6 0.0 0.26 10.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4471) Elf1 PF05129.13 BAJ49974.1 - 0.28 11.2 1.8 0.94 9.6 1.8 1.9 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like AsnC_trans_reg PF01037.21 BAJ49975.1 - 9.5e-14 51.1 0.2 1e-13 51.0 0.2 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 BAJ49975.1 - 0.015 15.3 0.2 0.056 13.5 0.2 1.8 1 1 0 1 1 1 0 NapD protein ACT_4 PF13291.6 BAJ49975.1 - 0.019 15.6 0.1 0.021 15.4 0.1 1.1 1 0 0 1 1 1 0 ACT domain GYD PF08734.11 BAJ49975.1 - 0.023 14.6 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 GYD domain Gln-synt_C PF00120.24 BAJ49976.1 - 5.8e-126 420.1 0.0 6.8e-126 419.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 BAJ49976.1 - 5.6e-30 102.9 0.0 1.3e-29 101.7 0.0 1.7 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain VKOR PF07884.14 BAJ49977.1 - 5.7e-23 81.4 17.0 7.3e-23 81.1 17.0 1.1 1 0 0 1 1 1 1 Vitamin K epoxide reductase family DUF4870 PF09685.10 BAJ49977.1 - 2.1 8.5 8.3 0.55 10.4 5.6 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4870) AhpC-TSA PF00578.21 BAJ49978.1 - 8.2e-15 54.8 0.0 1.1e-14 54.4 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 BAJ49978.1 - 2.4e-13 50.0 0.0 3.2e-13 49.6 0.0 1.2 1 0 0 1 1 1 1 Redoxin Thioredoxin PF00085.20 BAJ49978.1 - 1.7e-12 47.2 0.0 1.2e-07 31.7 0.1 2.2 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_8 PF13905.6 BAJ49978.1 - 3.2e-10 40.2 0.0 4.7e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 BAJ49978.1 - 8.4e-08 32.6 0.0 1.4e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain HlyD_2 PF12700.7 BAJ49978.1 - 0.00012 21.0 0.0 0.00016 20.6 0.0 1.1 1 0 0 1 1 1 1 HlyD family secretion protein Thioredoxin_4 PF13462.6 BAJ49978.1 - 0.0012 19.0 0.0 1.6 8.9 0.0 2.2 2 0 0 2 2 2 2 Thioredoxin DSBA PF01323.20 BAJ49978.1 - 0.0055 16.5 0.1 0.016 15.0 0.0 1.7 1 1 1 2 2 2 1 DSBA-like thioredoxin domain TrbC_Ftype PF09673.10 BAJ49978.1 - 0.01 15.9 0.0 0.026 14.6 0.0 1.6 2 0 0 2 2 2 0 Type-F conjugative transfer system pilin assembly protein TraF PF13728.6 BAJ49978.1 - 0.016 15.1 0.0 0.061 13.1 0.0 1.9 1 1 0 1 1 1 0 F plasmid transfer operon protein Thioredoxin_5 PF13743.6 BAJ49978.1 - 0.021 14.5 0.0 0.84 9.3 0.0 2.1 1 1 1 2 2 2 0 Thioredoxin MFS_1 PF07690.16 BAJ49979.1 - 1.4e-50 172.3 51.9 1.4e-50 172.3 51.9 1.7 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 BAJ49979.1 - 7.3e-09 35.0 14.5 7.3e-09 35.0 14.5 2.6 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.6 BAJ49979.1 - 0.00034 19.3 38.1 0.023 13.3 8.1 2.4 2 0 0 2 2 2 2 MFS/sugar transport protein DUF3937 PF13073.6 BAJ49979.1 - 0.52 10.5 3.6 1.5 9.0 0.3 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3937) CTP_synth_N PF06418.14 BAJ49980.1 - 1.6e-117 391.6 0.8 2e-117 391.2 0.8 1.1 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 BAJ49980.1 - 8.4e-50 169.2 0.0 1.6e-49 168.3 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 BAJ49980.1 - 6.1e-06 26.2 0.0 1.9e-05 24.6 0.0 1.8 1 1 0 1 1 1 1 Peptidase C26 CbiA PF01656.23 BAJ49980.1 - 0.025 14.7 0.0 0.065 13.3 0.0 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 BAJ49980.1 - 0.21 10.7 0.0 0.31 10.2 0.0 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase ABC2_membrane_3 PF12698.7 BAJ49981.1 - 2.2e-26 92.8 22.1 2.6e-26 92.6 22.1 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 BAJ49981.1 - 5e-24 85.1 21.7 6.4e-24 84.7 21.7 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 BAJ49981.1 - 5e-07 29.4 20.2 5e-07 29.4 20.2 2.6 2 1 1 3 3 3 1 ABC-2 type transporter ABC2_membrane_4 PF12730.7 BAJ49981.1 - 0.00013 22.0 14.0 0.00013 22.0 14.0 3.0 2 1 2 4 4 4 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 BAJ49981.1 - 0.38 10.3 28.8 1.1 8.7 25.3 2.8 2 1 0 2 2 2 0 ABC-2 family transporter protein ABC_tran PF00005.27 BAJ49982.1 - 4.9e-25 88.6 0.0 6.7e-25 88.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ49982.1 - 1.4e-11 44.8 0.0 0.00015 21.7 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ49982.1 - 0.00044 19.7 0.1 0.32 10.4 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAJ49982.1 - 0.00066 20.2 0.0 0.00098 19.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 BAJ49982.1 - 0.0012 18.5 0.1 0.0023 17.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.6 BAJ49982.1 - 0.0093 14.7 0.0 0.25 9.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 BAJ49982.1 - 0.022 14.5 0.1 0.032 13.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 BAJ49982.1 - 0.047 14.0 0.0 0.07 13.4 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ49982.1 - 0.054 13.9 0.0 0.092 13.2 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.22 BAJ49982.1 - 0.081 12.5 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_5 PF07728.14 BAJ49982.1 - 0.094 12.7 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_15 PF13175.6 BAJ49982.1 - 0.11 12.2 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain EamA PF00892.20 BAJ49983.1 - 8.5e-19 68.1 24.9 1.8e-10 41.1 13.8 2.1 2 0 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 BAJ49983.1 - 0.0053 16.8 4.2 1.7 8.7 0.1 3.5 3 1 1 4 4 4 2 Putative transmembrane family 234 HSDR_N PF04313.14 BAJ49984.1 - 5.3e-06 26.5 0.0 0.022 14.7 0.0 2.3 1 1 1 2 2 2 2 Type I restriction enzyme R protein N terminus (HSDR_N) Mcp5_PH PF12814.7 BAJ49984.1 - 0.13 12.4 0.0 0.46 10.6 0.0 1.8 2 0 0 2 2 2 0 Meiotic cell cortex C-terminal pleckstrin homology NifU_N PF01592.16 BAJ49985.1 - 2e-29 102.3 0.0 2.2e-29 102.2 0.0 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain SufE PF02657.15 BAJ49985.1 - 0.019 14.8 0.0 0.025 14.4 0.0 1.2 1 0 0 1 1 1 0 Fe-S metabolism associated domain HD PF01966.22 BAJ49986.1 - 2.5e-13 50.3 0.8 2.5e-13 50.3 0.8 2.1 2 1 1 3 3 3 1 HD domain HDOD PF08668.12 BAJ49986.1 - 0.0068 15.9 0.0 0.011 15.2 0.0 1.4 1 0 0 1 1 1 1 HDOD domain MIOX PF05153.15 BAJ49986.1 - 0.2 11.2 0.5 0.54 9.8 0.1 1.7 2 0 0 2 2 2 0 Myo-inositol oxygenase GatD_N PF18195.1 BAJ49987.1 - 2.5e-17 61.9 0.0 2.9e-17 61.7 0.0 1.1 1 0 0 1 1 1 1 GatD N-terminal domain CRISPR_Cas9_WED PF18061.1 BAJ49988.1 - 0.029 14.4 0.7 0.029 14.4 0.7 2.0 2 0 0 2 2 2 0 CRISPR-Cas9 WED domain PPL5 PF18168.1 BAJ49988.1 - 0.21 10.8 1.4 2.3 7.4 0.8 2.0 1 1 1 2 2 2 0 Prim-pol family 5 PrmC_N PF17827.1 BAJ49988.1 - 0.31 11.6 2.7 1.6 9.4 0.1 2.8 2 1 1 3 3 3 0 PrmC N-terminal domain DUF4145 PF13643.6 BAJ49988.1 - 0.32 11.1 0.2 0.32 11.1 0.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4145) Thymidylate_kin PF02223.17 BAJ49990.1 - 3.5e-49 167.0 0.1 3.9e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 BAJ49990.1 - 1.5e-11 44.6 0.5 2e-10 40.9 0.5 2.1 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_28 PF13521.6 BAJ49990.1 - 5.1e-09 36.6 0.0 6.6e-09 36.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 BAJ49990.1 - 3.6e-07 30.7 0.1 1.5e-06 28.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 BAJ49990.1 - 3.7e-07 30.8 0.1 8.3e-07 29.6 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 BAJ49990.1 - 3.7e-07 30.4 0.1 5.3e-07 29.9 0.1 1.2 1 0 0 1 1 1 1 AAA domain SKI PF01202.22 BAJ49990.1 - 4.2e-06 27.0 1.9 0.0069 16.5 0.1 2.4 1 1 2 3 3 3 2 Shikimate kinase AAA_22 PF13401.6 BAJ49990.1 - 0.0021 18.3 0.1 0.024 14.9 0.0 2.2 2 1 0 2 2 2 1 AAA domain APS_kinase PF01583.20 BAJ49990.1 - 0.015 15.2 0.1 0.035 14.0 0.0 1.7 2 1 0 2 2 2 0 Adenylylsulphate kinase SRP54 PF00448.22 BAJ49990.1 - 0.02 14.5 0.0 0.043 13.4 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 BAJ49990.1 - 0.024 15.0 0.0 0.047 14.1 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_31 PF13614.6 BAJ49990.1 - 0.031 14.2 0.1 0.091 12.7 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ49990.1 - 0.033 14.6 0.1 0.047 14.1 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CbiA PF01656.23 BAJ49990.1 - 0.039 14.0 0.0 0.12 12.5 0.0 1.7 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain MeaB PF03308.16 BAJ49990.1 - 0.05 12.6 0.0 0.08 11.9 0.0 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PPK2 PF03976.14 BAJ49990.1 - 0.072 12.6 0.2 0.57 9.7 0.0 2.0 2 0 0 2 2 2 0 Polyphosphate kinase 2 (PPK2) AAA_30 PF13604.6 BAJ49990.1 - 0.11 12.3 0.1 0.17 11.6 0.1 1.4 1 0 0 1 1 1 0 AAA domain ADK PF00406.22 BAJ49990.1 - 0.12 12.5 0.9 15 5.6 0.1 2.3 2 1 0 2 2 2 0 Adenylate kinase AAA_14 PF13173.6 BAJ49990.1 - 0.15 12.1 0.1 0.91 9.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain CBS PF00571.28 BAJ49990.1 - 1.1 9.7 4.0 14 6.2 1.2 3.3 3 1 0 3 3 2 0 CBS domain ILVD_EDD PF00920.21 BAJ49991.1 - 7.9e-214 711.0 0.2 8.9e-214 710.9 0.2 1.0 1 0 0 1 1 1 1 Dehydratase family GreA_GreB PF01272.19 BAJ49991.1 - 0.12 12.3 0.0 0.31 11.0 0.0 1.7 1 0 0 1 1 1 0 Transcription elongation factor, GreA/GreB, C-term HTH_25 PF13413.6 BAJ49991.1 - 0.17 11.8 0.0 0.46 10.4 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain TP1 PF02079.16 BAJ49991.1 - 0.2 11.6 0.2 1.5 8.8 0.0 2.4 3 0 0 3 3 3 0 Nuclear transition protein 1 UPF0147 PF03685.13 BAJ49992.1 - 3.2e-31 107.2 3.1 3.6e-31 107.1 3.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) PBECR3 PF18812.1 BAJ49992.1 - 0.11 12.5 0.9 3.2 7.7 0.1 2.1 1 1 1 2 2 2 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 CitMHS PF03600.16 BAJ49993.1 - 6.3e-30 104.4 40.8 6.3e-30 104.4 40.8 1.7 2 0 0 2 2 2 1 Citrate transporter ArsB PF02040.15 BAJ49993.1 - 3.5e-05 23.3 31.3 0.00034 20.1 31.3 2.1 1 1 0 1 1 1 1 Arsenical pump membrane protein PDT PF00800.18 BAJ49994.1 - 3e-63 213.0 0.1 3.8e-63 212.6 0.1 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 BAJ49994.1 - 1.6e-11 43.7 0.0 3e-11 42.9 0.0 1.5 1 0 0 1 1 1 1 ACT domain NAD_binding_2 PF03446.15 BAJ49995.1 - 9.8e-54 181.8 0.3 1.7e-53 181.0 0.3 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 BAJ49995.1 - 1.6e-32 112.3 0.0 3.4e-32 111.2 0.0 1.5 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 2-Hacid_dh_C PF02826.19 BAJ49995.1 - 2.5e-06 27.0 0.1 5.6e-06 25.8 0.0 1.6 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 BAJ49995.1 - 4.1e-06 27.3 0.0 9.7e-06 26.1 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 BAJ49995.1 - 0.00012 21.7 0.0 0.00021 20.9 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 BAJ49995.1 - 0.00019 21.5 0.0 0.00032 20.8 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 3HCDH_N PF02737.18 BAJ49995.1 - 0.015 15.1 0.0 0.032 14.1 0.0 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 BAJ49995.1 - 0.027 14.7 0.0 0.24 11.7 0.0 2.2 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain UDPG_MGDP_dh_N PF03721.14 BAJ49995.1 - 0.049 13.2 0.0 5.6 6.5 0.0 2.4 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MCM_lid PF17855.1 BAJ49996.1 - 0.09 13.2 0.2 14 6.2 0.0 2.8 3 0 0 3 3 3 0 MCM AAA-lid domain RHH_1 PF01402.21 BAJ49997.1 - 1.7e-08 34.1 0.1 1.9e-08 33.9 0.1 1.1 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 BAJ49997.1 - 0.00054 20.1 0.0 0.00054 20.1 0.0 1.0 1 0 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family Cpn60_TCP1 PF00118.24 BAJ49998.1 - 7.3e-186 618.6 20.2 8.3e-186 618.4 20.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Dak2 PF02734.17 BAJ49998.1 - 0.26 11.2 4.9 2.1 8.2 0.0 3.0 3 0 0 3 3 3 0 DAK2 domain RNA_pol_Rpb6 PF01192.22 BAJ49999.1 - 3.2e-11 43.0 0.0 4.7e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb6 Ac81 PF05820.11 BAJ50000.1 - 0.15 11.7 0.3 0.16 11.6 0.3 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 DUF2207 PF09972.9 BAJ50000.1 - 0.22 10.3 0.9 0.23 10.2 0.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) SPC25 PF06703.11 BAJ50000.1 - 0.26 11.0 2.5 0.32 10.8 2.5 1.0 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF763 PF05559.11 BAJ50001.1 - 1.2e-61 208.6 0.0 1.5e-61 208.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF763) Inos-1-P_synth PF01658.17 BAJ50002.1 - 3.1e-34 117.5 0.0 5.6e-34 116.7 0.0 1.4 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase DUF1611_N PF17396.2 BAJ50002.1 - 0.03 14.5 0.1 0.07 13.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_N) Rossmann-like domain PadR PF03551.14 BAJ50003.1 - 2.1e-17 62.8 0.3 2.8e-17 62.5 0.3 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 BAJ50003.1 - 1.1e-05 26.1 0.1 1.4e-05 25.7 0.1 1.1 1 0 0 1 1 1 1 Replication terminator protein Mrr_N PF14338.6 BAJ50003.1 - 0.01 15.9 0.0 1.6 8.9 0.0 2.4 2 1 0 2 2 2 0 Mrr N-terminal domain HTH_34 PF13601.6 BAJ50003.1 - 0.021 15.0 0.1 0.034 14.3 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF505 PF04458.12 BAJ50003.1 - 0.021 13.2 0.0 0.023 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) TrmB PF01978.19 BAJ50003.1 - 0.036 14.0 0.2 0.18 11.7 0.1 2.0 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 BAJ50003.1 - 0.082 12.8 0.1 0.093 12.6 0.1 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_27 PF13463.6 BAJ50003.1 - 0.13 12.8 0.0 0.31 11.6 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2513 PF10711.9 BAJ50003.1 - 0.14 12.5 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) 3HCDH_N PF02737.18 BAJ50004.1 - 4.9e-69 231.8 3.8 9.2e-69 230.9 3.8 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 BAJ50004.1 - 9.5e-68 228.2 0.0 1.7e-67 227.4 0.0 1.4 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 BAJ50004.1 - 5.7e-48 164.1 0.8 7.1e-43 147.4 0.0 2.7 2 1 1 3 3 3 2 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 BAJ50004.1 - 2.1e-47 159.7 0.6 1.8e-26 92.6 0.0 3.6 4 0 0 4 4 4 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AlaDh_PNT_C PF01262.21 BAJ50004.1 - 0.00019 20.8 1.3 0.0004 19.7 1.3 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_2 PF03446.15 BAJ50004.1 - 0.0007 19.8 2.0 0.0041 17.3 2.0 2.3 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 BAJ50004.1 - 0.0017 18.0 0.1 0.003 17.2 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox_2 PF07992.14 BAJ50004.1 - 0.003 16.8 0.4 0.0054 16.0 0.4 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 BAJ50004.1 - 0.0086 16.6 0.2 0.025 15.1 0.1 1.9 2 0 0 2 2 1 1 XdhC Rossmann domain NAD_Gly3P_dh_N PF01210.23 BAJ50004.1 - 0.022 14.7 0.2 0.055 13.4 0.2 1.7 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UPF0146 PF03686.13 BAJ50004.1 - 0.063 13.2 0.2 0.2 11.5 0.2 1.9 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) Sacchrp_dh_NADP PF03435.18 BAJ50004.1 - 0.067 13.5 0.4 0.16 12.2 0.4 1.7 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox PF00070.27 BAJ50004.1 - 0.11 13.1 0.9 0.34 11.5 0.9 1.9 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase SeleniumBinding PF11524.8 BAJ50004.1 - 0.13 12.7 0.0 1.2 9.7 0.0 2.4 2 0 0 2 2 2 0 Selenium binding protein Aminotran_5 PF00266.19 BAJ50005.1 - 2.4e-151 503.9 0.0 2.7e-151 503.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V SelA PF03841.13 BAJ50005.1 - 3.1e-05 23.1 0.0 5.1e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.20 BAJ50005.1 - 0.00064 18.4 0.0 0.0022 16.6 0.0 1.8 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 BAJ50005.1 - 0.011 15.1 0.1 0.018 14.4 0.1 1.6 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family TruB_C_2 PF16198.5 BAJ50005.1 - 0.11 12.7 0.0 0.38 10.9 0.0 1.9 2 0 0 2 2 2 0 tRNA pseudouridylate synthase B C-terminal domain tRNA-Thr_ED PF08915.11 BAJ50006.1 - 2e-39 134.8 0.0 3.9e-39 133.8 0.0 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase tRNA-synt_2b PF00587.25 BAJ50006.1 - 5.8e-19 68.7 0.1 1.3e-18 67.6 0.1 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 BAJ50006.1 - 1.6e-17 63.4 0.2 3.8e-17 62.2 0.2 1.7 1 0 0 1 1 1 1 Anticodon binding domain Phage_ABA_S PF18066.1 BAJ50006.1 - 0.028 15.1 0.0 1.6 9.5 0.0 2.6 2 0 0 2 2 2 0 Phage ABA sandwich domain Imm61 PF15598.6 BAJ50006.1 - 0.097 12.6 0.0 0.76 9.7 0.0 2.4 3 0 0 3 3 3 0 Immunity protein 61 AP_endonuc_2 PF01261.24 BAJ50006.1 - 0.2 11.1 0.1 0.49 9.8 0.1 1.6 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Bromodomain PF00439.25 BAJ50007.1 - 0.012 15.7 0.0 0.017 15.2 0.0 1.3 1 0 0 1 1 1 0 Bromodomain MazE_antitoxin PF04014.18 BAJ50007.1 - 0.023 14.7 0.2 0.14 12.1 0.2 2.0 1 1 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin PIN PF01850.21 BAJ50008.1 - 1.1e-14 55.0 0.5 1.5e-14 54.5 0.5 1.2 1 0 0 1 1 1 1 PIN domain Ferritin PF00210.24 BAJ50009.1 - 3.6e-27 95.0 0.6 4e-27 94.9 0.6 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 BAJ50009.1 - 7.7e-06 26.3 0.2 1.1e-05 25.8 0.2 1.2 1 0 0 1 1 1 1 Rubrerythrin Ferritin_2 PF13668.6 BAJ50009.1 - 0.00021 21.5 1.5 0.089 13.0 0.0 2.3 1 1 1 2 2 2 2 Ferritin-like domain DUF2383 PF09537.10 BAJ50009.1 - 0.0015 18.9 0.2 0.18 12.1 0.0 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF2383) COQ7 PF03232.13 BAJ50009.1 - 0.0051 16.6 0.2 0.35 10.6 0.0 2.2 2 0 0 2 2 2 2 Ubiquinone biosynthesis protein COQ7 MukF_M PF17192.4 BAJ50010.1 - 0.014 15.1 0.3 0.023 14.4 0.3 1.4 1 1 0 1 1 1 0 MukF middle domain CRISPR_Cas9_WED PF18061.1 BAJ50010.1 - 0.077 13.1 0.4 0.077 13.1 0.4 1.8 2 1 0 2 2 2 0 CRISPR-Cas9 WED domain PrmC_N PF17827.1 BAJ50011.1 - 0.055 14.1 0.2 0.06 13.9 0.2 1.1 1 0 0 1 1 1 0 PrmC N-terminal domain GTP-bdg_N PF13167.6 BAJ50012.1 - 9e-25 87.2 0.0 2e-24 86.1 0.0 1.6 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal MMR_HSR1 PF01926.23 BAJ50012.1 - 2.5e-18 66.2 0.0 4.8e-18 65.3 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 BAJ50012.1 - 1.3e-14 54.5 4.5 1.3e-14 54.5 4.5 1.9 2 0 0 2 2 2 1 GTP-binding GTPase Middle Region FeoB_N PF02421.18 BAJ50012.1 - 3.2e-07 30.0 0.1 8.6e-07 28.6 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 BAJ50012.1 - 2.5e-05 23.9 0.2 0.0017 18.0 0.1 2.7 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain Arf PF00025.21 BAJ50012.1 - 5.2e-05 22.8 1.5 0.00015 21.3 0.2 2.3 2 1 0 2 2 2 1 ADP-ribosylation factor family Roc PF08477.13 BAJ50012.1 - 7.2e-05 23.0 0.0 0.00098 19.3 0.0 2.3 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase RsgA_GTPase PF03193.16 BAJ50012.1 - 8.5e-05 22.5 0.1 0.089 12.7 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase Ras PF00071.22 BAJ50012.1 - 0.00026 20.6 0.0 0.00075 19.1 0.0 1.8 1 1 0 1 1 1 1 Ras family MMR_HSR1_Xtn PF16897.5 BAJ50012.1 - 0.00044 20.2 0.0 0.0011 18.9 0.0 1.7 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain TniB PF05621.11 BAJ50012.1 - 0.0073 15.7 0.1 0.049 13.0 0.0 2.4 2 1 0 2 2 2 1 Bacterial TniB protein SRPRB PF09439.10 BAJ50012.1 - 0.012 15.1 0.0 0.024 14.1 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit NOG1 PF06858.14 BAJ50012.1 - 0.014 15.2 0.5 0.045 13.5 0.5 1.9 1 0 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) ABC_tran PF00005.27 BAJ50012.1 - 0.015 15.8 0.1 0.088 13.3 0.0 2.1 1 1 1 2 2 2 0 ABC transporter OEP PF02321.18 BAJ50012.1 - 0.017 14.9 2.1 5.6 6.7 0.0 2.9 3 0 0 3 3 3 0 Outer membrane efflux protein MnmE_helical PF12631.7 BAJ50012.1 - 0.02 15.1 0.0 0.07 13.3 0.0 2.0 1 1 0 1 1 1 0 MnmE helical domain cobW PF02492.19 BAJ50012.1 - 0.066 12.8 0.1 3.4 7.2 0.0 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 BAJ50012.1 - 0.09 12.8 0.2 0.32 11.0 0.0 2.0 2 1 0 2 2 2 0 Dynamin family PD-C2-AF1 PF09310.10 BAJ50012.1 - 0.12 11.8 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 AAA_23 PF13476.6 BAJ50012.1 - 9.4 6.7 7.1 4.9 7.6 0.5 2.5 1 1 0 2 2 2 0 AAA domain TGT_C2 PF14810.6 BAJ50013.1 - 6.1e-19 67.9 0.0 1.1e-18 67.1 0.0 1.4 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 BAJ50013.1 - 7.1e-11 41.9 5.6 1.1e-10 41.3 5.6 1.3 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 BAJ50013.1 - 8.4e-05 22.8 0.3 0.00012 22.3 0.3 1.2 1 0 0 1 1 1 1 UPF0113 PUA domain FBPase PF00316.20 BAJ50013.1 - 0.042 13.3 0.0 0.054 13.0 0.0 1.2 1 0 0 1 1 1 0 Fructose-1-6-bisphosphatase, N-terminal domain DraK_HK_N PF18092.1 BAJ50013.1 - 0.043 14.2 0.2 0.09 13.2 0.2 1.5 1 0 0 1 1 1 0 DraK Histidine Kinase N-terminal domain PUA_3 PF17785.1 BAJ50013.1 - 0.12 12.2 1.4 1.4 8.7 0.2 2.6 3 0 0 3 3 3 0 PUA-like domain NAC PF01849.18 BAJ50014.1 - 1.6e-06 28.0 0.1 2.8e-06 27.2 0.1 1.4 1 0 0 1 1 1 1 NAC domain UBA_4 PF14555.6 BAJ50014.1 - 0.0032 17.2 0.0 0.0049 16.7 0.0 1.3 1 0 0 1 1 1 1 UBA-like domain HOIP-UBA PF16678.5 BAJ50014.1 - 0.0057 16.7 0.1 0.0093 16.0 0.1 1.5 1 0 0 1 1 1 1 HOIP UBA domain pair UBA PF00627.31 BAJ50014.1 - 0.081 12.9 0.0 0.2 11.6 0.0 1.7 1 0 0 1 1 1 0 UBA/TS-N domain HTH_20 PF12840.7 BAJ50015.1 - 8.1e-09 35.4 0.1 3.9e-08 33.2 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 BAJ50015.1 - 7.1e-08 32.2 0.6 2e-06 27.6 0.2 3.2 2 1 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 BAJ50015.1 - 3.5e-06 26.9 1.0 6.6e-06 26.0 1.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix ATP-cone PF03477.16 BAJ50015.1 - 6.9e-05 23.3 0.1 0.00015 22.2 0.1 1.6 1 0 0 1 1 1 1 ATP cone domain NRDD PF13597.6 BAJ50015.1 - 0.0087 14.9 0.0 0.029 13.2 0.0 1.7 2 0 0 2 2 2 1 Anaerobic ribonucleoside-triphosphate reductase DUF4364 PF14277.6 BAJ50015.1 - 0.02 14.7 0.2 0.077 12.7 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4364) TerB PF05099.13 BAJ50015.1 - 0.049 13.6 0.1 0.14 12.1 0.1 1.8 1 1 0 1 1 1 0 Tellurite resistance protein TerB DUF2513 PF10711.9 BAJ50015.1 - 0.11 12.8 0.1 0.31 11.3 0.1 1.8 2 0 0 2 2 2 0 Hypothetical protein (DUF2513) OTCace PF00185.24 BAJ50016.1 - 1.2e-52 178.2 0.2 2e-52 177.4 0.1 1.4 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 BAJ50016.1 - 2.4e-46 157.4 0.0 5.3e-46 156.3 0.0 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Peptidase_C23 PF05379.11 BAJ50016.1 - 0.00055 20.0 0.0 0.0012 18.9 0.0 1.5 1 0 0 1 1 1 1 Carlavirus endopeptidase PrpR_N PF06506.11 BAJ50016.1 - 0.0079 15.8 0.0 0.017 14.7 0.0 1.7 1 1 0 1 1 1 1 Propionate catabolism activator Oxidored_nitro PF00148.19 BAJ50016.1 - 0.011 14.5 0.0 0.015 14.1 0.0 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase PALP PF00291.25 BAJ50016.1 - 0.053 12.9 0.0 0.083 12.3 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme Spt5-NGN PF03439.13 BAJ50017.1 - 8.9e-15 54.4 0.0 3.1e-09 36.6 0.0 2.4 2 0 0 2 2 2 2 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 BAJ50017.1 - 6.9e-05 22.6 0.3 0.00015 21.6 0.3 1.5 1 0 0 1 1 1 1 KOW motif NusG PF02357.19 BAJ50017.1 - 0.0081 16.6 0.0 0.44 11.1 0.0 2.4 2 0 0 2 2 2 1 Transcription termination factor nusG Ribosomal_L11 PF00298.19 BAJ50018.1 - 3.2e-22 78.8 0.6 4.6e-22 78.3 0.6 1.2 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 BAJ50018.1 - 1e-17 63.7 0.0 1.8e-17 62.9 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L1 PF00687.21 BAJ50019.1 - 1.1e-40 139.5 2.4 1.4e-40 139.3 2.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Cep57_MT_bd PF06657.13 BAJ50019.1 - 2.4 8.6 7.3 5.9 7.4 0.1 3.5 5 0 0 5 5 5 0 Centrosome microtubule-binding domain of Cep57 RL10P_insert PF17777.1 BAJ50020.1 - 1.5e-20 73.0 0.0 4.5e-20 71.4 0.0 1.8 2 0 0 2 2 2 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_L10 PF00466.20 BAJ50020.1 - 3.6e-18 65.6 1.3 7.2e-18 64.6 0.9 1.7 2 0 0 2 2 2 1 Ribosomal protein L10 tRNA-synt_2c PF01411.19 BAJ50021.1 - 2.8e-113 379.3 0.0 3.9e-113 378.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 BAJ50021.1 - 3.2e-13 49.5 0.4 6.2e-13 48.6 0.4 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.19 BAJ50021.1 - 1.9e-07 31.6 1.1 1.9e-07 31.6 1.1 2.0 2 0 0 2 2 2 1 DHHA1 domain DrsE_2 PF13686.6 BAJ50021.1 - 0.017 15.0 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 DsrE/DsrF/DrsH-like family tRNA-synt_2e PF02091.15 BAJ50021.1 - 0.087 12.0 0.0 0.15 11.3 0.0 1.4 1 0 0 1 1 1 0 Glycyl-tRNA synthetase alpha subunit Fib_alpha PF08702.10 BAJ50021.1 - 0.3 11.3 0.8 3.6 7.8 0.0 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family ABC_tran PF00005.27 BAJ50023.1 - 5.4e-30 104.7 0.0 6.9e-30 104.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50023.1 - 2.1e-14 54.1 0.1 1e-07 32.1 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 BAJ50023.1 - 0.00064 19.5 0.0 0.99 9.0 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 BAJ50023.1 - 0.0075 16.0 0.1 0.013 15.2 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 BAJ50023.1 - 0.0093 15.7 0.0 0.014 15.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ50023.1 - 0.012 16.0 0.0 0.023 15.1 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 BAJ50023.1 - 0.019 15.5 0.0 0.03 14.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ50023.1 - 0.031 14.7 0.0 0.17 12.3 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 BAJ50023.1 - 0.037 13.6 0.0 0.061 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 BAJ50023.1 - 0.053 12.6 0.1 0.1 11.7 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_19 PF13245.6 BAJ50023.1 - 0.16 12.3 0.1 0.38 11.1 0.1 1.6 1 0 0 1 1 1 0 AAA domain Ribosomal_60s PF00428.19 BAJ50024.1 - 7.4e-15 55.3 13.0 8.9e-15 55.1 13.0 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein PepSY_2 PF13670.6 BAJ50024.1 - 2.3 8.3 7.4 4.1 7.5 5.5 2.1 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain DUF763 PF05559.11 BAJ50025.1 - 4.8e-97 324.9 0.0 5.6e-97 324.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF763) EF1_GNE PF00736.19 BAJ50026.1 - 8e-15 54.8 0.1 9e-15 54.6 0.1 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain NTP_transf_3 PF12804.7 BAJ50027.1 - 8.6e-26 91.2 0.3 1.5e-25 90.4 0.3 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 BAJ50027.1 - 0.00028 20.9 0.0 0.00042 20.3 0.0 1.3 1 1 0 1 1 1 1 Cytidylyltransferase SNAP PF14938.6 BAJ50027.1 - 0.0044 16.5 1.0 0.0078 15.7 1.0 1.3 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP MobB PF03205.14 BAJ50028.1 - 1.1e-27 96.5 0.1 1.4e-27 96.2 0.1 1.1 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B CbiA PF01656.23 BAJ50028.1 - 0.024 14.7 0.2 0.063 13.3 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_14 PF13173.6 BAJ50028.1 - 0.058 13.4 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain Torsin PF06309.11 BAJ50028.1 - 0.1 12.7 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Torsin PduV-EutP PF10662.9 BAJ50028.1 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Rib_5-P_isom_A PF06026.14 BAJ50029.1 - 3.7e-53 179.7 0.0 4.5e-53 179.4 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 BAJ50029.1 - 2.7e-06 27.4 0.0 1.8e-05 24.7 0.0 1.9 2 0 0 2 2 2 1 DeoR C terminal sensor domain DUF996 PF06195.13 BAJ50030.1 - 1.3e-33 116.2 21.7 1.3e-33 116.2 21.7 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF996) Yip1 PF04893.17 BAJ50030.1 - 0.081 12.6 33.8 0.077 12.7 32.7 1.4 1 1 0 1 1 1 0 Yip1 domain DUF962 PF06127.11 BAJ50030.1 - 2.4 8.3 10.6 1.2 9.3 1.1 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF962) TrmB PF01978.19 BAJ50031.1 - 1.2e-15 57.2 0.2 7.1e-14 51.4 0.0 2.3 1 1 1 2 2 2 2 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 BAJ50031.1 - 0.0081 15.9 0.0 0.019 14.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) SMC_Nse1 PF07574.13 BAJ50031.1 - 0.052 13.4 0.0 0.19 11.6 0.0 1.8 2 0 0 2 2 2 0 Nse1 non-SMC component of SMC5-6 complex HTH_IclR PF09339.10 BAJ50031.1 - 0.1 12.4 0.0 0.29 11.0 0.0 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain Ubie_methyltran PF01209.18 BAJ50032.1 - 4.7e-20 71.9 0.0 5.6e-20 71.7 0.0 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 BAJ50032.1 - 7.1e-16 58.6 0.0 1.1e-15 58.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ50032.1 - 4.1e-13 49.8 0.0 6.5e-13 49.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAJ50032.1 - 1.4e-11 44.5 0.0 1.6e-11 44.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAJ50032.1 - 3.8e-08 34.0 0.0 5.8e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAJ50032.1 - 2.6e-07 30.5 0.0 3.5e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 BAJ50032.1 - 0.0054 16.6 0.0 0.0079 16.1 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase FtsJ PF01728.19 BAJ50032.1 - 0.0054 16.8 0.0 0.02 15.0 0.0 2.0 1 1 0 1 1 1 1 FtsJ-like methyltransferase MTS PF05175.14 BAJ50032.1 - 0.0074 15.8 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 BAJ50032.1 - 0.0075 16.0 0.0 0.011 15.4 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NNMT_PNMT_TEMT PF01234.17 BAJ50032.1 - 0.011 15.0 0.0 1.7 7.8 0.0 2.2 1 1 0 2 2 2 0 NNMT/PNMT/TEMT family MetW PF07021.12 BAJ50032.1 - 0.11 12.1 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW V4R PF02830.18 BAJ50033.1 - 1.8e-05 24.7 3.9 3.3e-05 23.8 3.9 1.5 1 0 0 1 1 1 1 V4R domain UbiA PF01040.18 BAJ50034.1 - 9.9e-28 97.1 29.9 2.2e-27 96.0 29.9 1.5 1 1 0 1 1 1 1 UbiA prenyltransferase family SoPB_HTH PF18090.1 BAJ50034.1 - 0.013 15.6 0.0 0.024 14.8 0.0 1.4 1 0 0 1 1 1 0 Centromere-binding protein HTH domain DUF1077 PF06417.12 BAJ50035.1 - 0.025 14.6 0.1 0.061 13.3 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) CDC37_C PF08564.10 BAJ50035.1 - 0.09 12.9 0.1 0.18 12.0 0.1 1.4 1 0 0 1 1 1 0 Cdc37 C terminal domain Presenilin PF01080.17 BAJ50036.1 - 2e-08 33.4 29.9 6.3e-05 21.9 4.8 2.6 1 1 1 2 2 2 2 Presenilin SPP PF06550.11 BAJ50036.1 - 2.5e-06 27.2 13.2 2.5e-06 27.2 13.2 2.0 1 1 1 2 2 2 1 Signal-peptide peptidase, presenilin aspartyl protease Phage_holin_1 PF04531.13 BAJ50036.1 - 0.87 10.2 4.5 4.9 7.8 2.0 2.4 2 0 0 2 2 2 0 Bacteriophage holin CitG PF01874.16 BAJ50037.1 - 9.4e-54 182.9 0.1 1.1e-53 182.8 0.1 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase HTH_Tnp_Mu_2 PF09039.11 BAJ50037.1 - 0.022 14.8 0.1 0.037 14.1 0.1 1.3 1 0 0 1 1 1 0 Mu DNA binding, I gamma subdomain DUF935 PF06074.12 BAJ50037.1 - 0.043 12.6 0.0 0.059 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF935) Ni_hydr_CYTB PF01292.20 BAJ50038.1 - 0.083 12.5 4.0 0.037 13.6 1.9 1.5 1 1 0 1 1 1 0 Prokaryotic cytochrome b561 DUF5453 PF17534.2 BAJ50038.1 - 0.15 12.0 6.0 0.083 12.8 3.4 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5453) DUF4728 PF15860.5 BAJ50038.1 - 0.2 12.4 6.9 0.1 13.3 4.3 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4728) Saf_2TM PF18303.1 BAJ50038.1 - 0.94 9.1 5.1 0.62 9.6 0.4 2.0 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain Vma12 PF11712.8 BAJ50038.1 - 1.9 8.6 5.5 4 7.5 5.5 1.6 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase HTH_5 PF01022.20 BAJ50039.1 - 4e-12 45.8 0.1 7.4e-12 44.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 BAJ50039.1 - 2.1e-05 24.4 0.1 3.4e-05 23.7 0.1 1.4 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_20 PF12840.7 BAJ50039.1 - 5.1e-05 23.3 0.0 9e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 BAJ50039.1 - 0.00019 21.3 0.0 0.00036 20.4 0.0 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 BAJ50039.1 - 0.0003 20.5 0.0 0.00036 20.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_24 PF13412.6 BAJ50039.1 - 0.0014 18.2 0.1 0.0025 17.3 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 BAJ50039.1 - 0.0093 16.3 0.0 0.014 15.7 0.0 1.4 1 1 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.12 BAJ50039.1 - 0.012 15.6 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 HTH domain HTH_29 PF13551.6 BAJ50039.1 - 0.017 15.1 0.0 0.079 13.0 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn helix HxlR PF01638.17 BAJ50039.1 - 0.052 13.4 0.0 0.071 13.0 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix RuvB_C PF05491.13 BAJ50039.1 - 0.11 12.4 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain Cyclase PF04199.13 BAJ50040.1 - 1.4e-32 112.8 0.0 2.1e-32 112.2 0.0 1.3 1 0 0 1 1 1 1 Putative cyclase CoA_transf_3 PF02515.17 BAJ50041.1 - 4.1e-116 388.1 0.0 4.7e-116 387.9 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III SAM_4 PF18017.1 BAJ50041.1 - 0.12 12.3 0.0 0.38 10.8 0.0 1.8 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) PIN_10 PF18478.1 BAJ50041.1 - 0.17 12.1 0.0 0.45 10.8 0.0 1.7 1 0 0 1 1 1 0 PIN like domain ECH_1 PF00378.20 BAJ50042.1 - 2.4e-55 187.6 0.0 2.8e-55 187.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 BAJ50042.1 - 3.9e-39 135.1 0.0 6.7e-34 117.9 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase ICE2 PF08426.10 BAJ50042.1 - 0.049 12.7 0.0 0.062 12.4 0.0 1.1 1 0 0 1 1 1 0 ICE2 DUF655 PF04919.12 BAJ50043.1 - 1.9e-47 161.6 0.5 2.1e-47 161.4 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 BAJ50043.1 - 0.0015 18.7 0.0 0.0044 17.3 0.0 1.7 1 1 0 1 1 1 1 Helix-hairpin-helix motif XPC-binding PF09280.11 BAJ50043.1 - 0.078 12.7 0.0 0.24 11.1 0.0 1.9 2 0 0 2 2 2 0 XPC-binding domain HHH_3 PF12836.7 BAJ50043.1 - 0.09 13.0 0.0 0.18 12.1 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif RNA_pol_Rpb4 PF03874.16 BAJ50044.1 - 1.1e-07 32.2 0.2 1.2e-07 32.1 0.2 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 NAPRTase_C PF17956.1 BAJ50044.1 - 0.059 13.8 0.1 0.082 13.3 0.1 1.1 1 0 0 1 1 1 0 Nicotinate phosphoribosyltransferase C-terminal domain Ribosomal_L21e PF01157.18 BAJ50045.1 - 4.5e-27 93.9 0.4 5.4e-27 93.6 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e THUMP PF02926.17 BAJ50046.1 - 3.1e-08 33.8 2.5 3.7e-08 33.6 0.3 2.1 3 0 0 3 3 3 1 THUMP domain SRP54 PF00448.22 BAJ50047.1 - 3.8e-71 238.8 0.0 5.3e-71 238.3 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 BAJ50047.1 - 4.1e-26 91.5 0.0 1.1e-25 90.1 0.0 1.8 1 0 0 1 1 1 1 Signal peptide binding domain SRP54_N PF02881.19 BAJ50047.1 - 7.5e-15 54.9 1.7 1.6e-14 53.9 0.1 2.4 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 BAJ50047.1 - 4e-06 26.9 0.0 1.2e-05 25.4 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_18 PF13238.6 BAJ50047.1 - 0.00012 22.7 0.3 0.017 15.6 0.1 3.0 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 BAJ50047.1 - 0.00013 21.4 0.0 0.00046 19.5 0.0 1.9 1 1 1 2 2 2 1 Zeta toxin AAA_22 PF13401.6 BAJ50047.1 - 0.00064 20.0 0.2 0.0061 16.8 0.0 2.6 3 0 0 3 3 2 1 AAA domain 6PF2K PF01591.18 BAJ50047.1 - 0.00097 18.5 0.0 0.0015 17.8 0.0 1.3 1 0 0 1 1 1 1 6-phosphofructo-2-kinase IMPDH PF00478.25 BAJ50047.1 - 0.0012 18.0 0.3 0.0025 16.9 0.3 1.5 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain ParA PF10609.9 BAJ50047.1 - 0.0014 18.1 0.0 0.0029 17.1 0.0 1.5 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase MeaB PF03308.16 BAJ50047.1 - 0.0015 17.5 0.5 0.033 13.2 0.2 2.4 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_28 PF13521.6 BAJ50047.1 - 0.0017 18.6 0.2 0.023 14.9 0.1 2.4 2 1 0 2 2 2 1 AAA domain cobW PF02492.19 BAJ50047.1 - 0.0021 17.7 2.1 0.067 12.8 2.1 2.3 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 BAJ50047.1 - 0.0025 17.5 0.0 0.016 15.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 BAJ50047.1 - 0.003 17.7 0.0 0.01 16.0 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_17 PF13207.6 BAJ50047.1 - 0.0035 17.8 0.5 0.018 15.5 0.1 2.4 2 0 0 2 2 2 1 AAA domain MobB PF03205.14 BAJ50047.1 - 0.0039 17.1 0.2 0.01 15.7 0.1 1.8 2 0 0 2 2 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.6 BAJ50047.1 - 0.0062 16.9 0.0 0.08 13.3 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_24 PF13479.6 BAJ50047.1 - 0.007 16.1 0.0 0.016 14.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain APS_kinase PF01583.20 BAJ50047.1 - 0.0089 15.9 0.0 0.023 14.6 0.0 1.7 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA PF00004.29 BAJ50047.1 - 0.01 16.3 2.0 0.026 14.9 1.0 2.3 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 BAJ50047.1 - 0.013 14.9 0.1 0.034 13.6 0.1 1.7 1 1 0 1 1 1 0 Bacterial TniB protein Glyco_transf_4 PF13439.6 BAJ50047.1 - 0.017 15.1 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 NTPase_1 PF03266.15 BAJ50047.1 - 0.019 14.9 1.5 0.034 14.1 0.1 2.1 2 0 0 2 2 2 0 NTPase AAA_31 PF13614.6 BAJ50047.1 - 0.025 14.5 0.5 0.084 12.8 0.3 1.8 1 1 0 2 2 1 0 AAA domain MipZ PF09140.11 BAJ50047.1 - 0.033 13.5 0.6 1.3 8.2 0.6 2.4 1 1 0 1 1 1 0 ATPase MipZ AAA_26 PF13500.6 BAJ50047.1 - 0.042 13.7 1.3 0.54 10.0 1.3 2.2 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 BAJ50047.1 - 0.044 13.7 0.0 0.15 12.0 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA_7 PF12775.7 BAJ50047.1 - 0.057 12.9 0.0 0.1 12.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Thymidylate_kin PF02223.17 BAJ50047.1 - 0.061 13.0 0.3 0.2 11.3 0.3 1.9 1 0 0 1 1 1 0 Thymidylate kinase AAA_5 PF07728.14 BAJ50047.1 - 0.084 12.9 0.7 0.51 10.3 0.3 2.4 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) ResIII PF04851.15 BAJ50047.1 - 0.086 12.8 0.1 0.18 11.8 0.1 1.6 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit KTI12 PF08433.10 BAJ50047.1 - 0.095 12.1 0.1 0.24 10.8 0.0 1.7 2 0 0 2 2 1 0 Chromatin associated protein KTI12 AAA_11 PF13086.6 BAJ50047.1 - 0.098 12.4 0.4 4.2 7.1 0.0 2.7 3 0 0 3 3 3 0 AAA domain PFOR_II PF17147.4 BAJ50047.1 - 0.1 12.9 0.0 0.82 10.0 0.0 2.6 3 0 0 3 3 1 0 Pyruvate:ferredoxin oxidoreductase core domain II LpxK PF02606.14 BAJ50047.1 - 0.12 11.4 0.7 0.28 10.3 0.2 1.7 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_14 PF13173.6 BAJ50047.1 - 0.12 12.4 0.3 1.1 9.3 0.1 2.5 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.6 BAJ50047.1 - 0.2 11.2 1.8 8 6.0 0.2 2.6 3 0 0 3 3 2 0 AAA domain GGA_N-GAT PF18308.1 BAJ50047.1 - 3.2 7.4 5.4 18 5.0 1.0 2.9 2 0 0 2 2 2 0 GGA N-GAT domain Epimerase PF01370.21 BAJ50048.1 - 2.1e-46 158.4 0.0 2.6e-46 158.1 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 BAJ50048.1 - 3.4e-43 148.3 0.0 2.4e-41 142.3 0.0 2.1 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 BAJ50048.1 - 7.3e-19 67.9 0.0 9.5e-19 67.6 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 BAJ50048.1 - 2.2e-14 53.1 0.0 1.4e-12 47.2 0.0 2.2 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 BAJ50048.1 - 1.3e-12 47.5 0.0 2.8e-11 43.1 0.0 2.4 3 0 0 3 3 3 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 BAJ50048.1 - 4e-11 42.6 0.0 1.7e-09 37.2 0.0 2.7 2 1 0 2 2 2 1 Male sterility protein NAD_binding_10 PF13460.6 BAJ50048.1 - 1.1e-05 25.4 0.0 2.3e-05 24.4 0.0 1.6 1 1 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 BAJ50048.1 - 0.027 14.4 0.4 0.14 12.0 0.1 2.1 1 1 1 2 2 2 0 KR domain adh_short_C2 PF13561.6 BAJ50048.1 - 0.17 11.4 0.0 0.34 10.4 0.0 1.5 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase MOSC_N PF03476.16 BAJ50049.1 - 4.7e-13 49.1 0.0 8.2e-13 48.3 0.0 1.4 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain MOSC PF03473.17 BAJ50049.1 - 1.7e-10 41.0 0.0 2.6e-10 40.4 0.0 1.3 1 0 0 1 1 1 1 MOSC domain LAGLIDADG_3 PF14528.6 BAJ50050.1 - 3.1e-17 62.6 0.0 7.2e-15 55.1 0.0 2.5 2 0 0 2 2 2 2 LAGLIDADG-like domain Hom_end PF05204.14 BAJ50050.1 - 0.0062 16.7 0.0 0.016 15.3 0.0 1.7 2 0 0 2 2 2 1 Homing endonuclease Imm43 PF15570.6 BAJ50050.1 - 0.026 14.5 0.1 0.043 13.8 0.1 1.3 1 0 0 1 1 1 0 Immunity protein 43 Glycos_transf_1 PF00534.20 BAJ50051.1 - 4.1e-42 143.6 0.0 5.7e-42 143.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 BAJ50051.1 - 4.2e-27 95.2 0.0 7.9e-27 94.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 BAJ50051.1 - 8.9e-08 32.4 0.0 1.7e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_20 PF00982.21 BAJ50051.1 - 0.00061 18.6 0.0 0.21 10.2 0.0 2.6 2 1 0 2 2 2 2 Glycosyltransferase family 20 Tex_YqgF PF16921.5 BAJ50051.1 - 0.19 12.2 0.0 0.35 11.3 0.0 1.5 1 0 0 1 1 1 0 Tex protein YqgF-like domain MS_channel PF00924.18 BAJ50052.1 - 6.6e-22 78.1 0.0 6.6e-22 78.1 0.0 1.3 2 0 0 2 2 2 1 Mechanosensitive ion channel Peptidase_M24 PF00557.24 BAJ50053.1 - 6e-35 120.8 0.0 8e-35 120.4 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF2752 PF10825.8 BAJ50054.1 - 0.0007 19.6 0.2 0.12 12.4 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2752) TFIIS_C PF01096.18 BAJ50054.1 - 0.0016 18.2 1.1 1.4 8.9 0.1 2.1 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) TF_Zn_Ribbon PF08271.12 BAJ50054.1 - 0.002 17.6 2.6 0.49 9.9 0.1 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 BAJ50054.1 - 0.0032 17.6 1.7 0.0065 16.6 1.7 1.5 1 1 0 1 1 1 1 Zinc ribbon domain zf-FPG_IleRS PF06827.14 BAJ50054.1 - 0.0078 16.1 2.2 0.1 12.5 0.5 2.2 2 0 0 2 2 2 1 Zinc finger found in FPG and IleRS Lar_restr_allev PF14354.6 BAJ50054.1 - 0.03 14.7 0.1 3.6 8.0 0.1 2.1 2 0 0 2 2 2 0 Restriction alleviation protein Lar HypA PF01155.19 BAJ50054.1 - 0.034 14.2 0.1 0.041 13.9 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-tcix PF14952.6 BAJ50054.1 - 0.056 13.1 4.4 1.8 8.3 1.2 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Zn_Tnp_IS1595 PF12760.7 BAJ50054.1 - 0.056 13.4 0.4 1.4 8.9 0.1 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 BAJ50054.1 - 0.061 13.1 5.7 1.9 8.3 0.6 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 BAJ50054.1 - 0.068 13.1 1.0 9.8 6.2 0.1 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-ribbon_3 PF13248.6 BAJ50054.1 - 0.12 11.8 3.4 0.34 10.4 0.3 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-RRN7 PF11781.8 BAJ50054.1 - 0.12 12.0 2.3 9.2 6.1 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Vps36-NZF-N PF16988.5 BAJ50054.1 - 0.15 11.5 1.8 0.27 10.6 0.4 1.9 1 1 1 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain DUF1512 PF07431.12 BAJ50055.1 - 1.6e-140 468.1 5.8 1.9e-140 467.9 5.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1512) DUF3496 PF12001.8 BAJ50055.1 - 0.0055 17.1 1.8 1.1 9.6 0.5 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF3496) CK2S PF15011.6 BAJ50055.1 - 0.0083 16.0 0.4 0.84 9.5 0.0 2.6 3 0 0 3 3 3 1 Casein Kinase 2 substrate HU-DNA_bdg PF14848.6 BAJ50055.1 - 0.57 10.2 3.2 2.4 8.2 0.0 2.7 3 0 0 3 3 3 0 DNA-binding domain Topoisom_bac PF01131.20 BAJ50056.1 - 2.1e-100 336.7 0.0 2.8e-100 336.2 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 BAJ50056.1 - 4.4e-12 46.1 0.1 9.5e-12 45.1 0.1 1.6 1 0 0 1 1 1 1 Toprim domain Exonuc_VII_S PF02609.16 BAJ50056.1 - 0.03 14.4 1.1 0.098 12.7 1.1 2.0 1 0 0 1 1 1 0 Exonuclease VII small subunit adh_short_C2 PF13561.6 BAJ50058.1 - 1.2e-61 208.3 0.0 1.8e-61 207.7 0.0 1.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 BAJ50058.1 - 1.9e-45 154.8 0.0 2.2e-45 154.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 BAJ50058.1 - 2.2e-08 34.2 0.0 3.1e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 BAJ50058.1 - 3.4e-05 23.4 0.0 0.00015 21.3 0.0 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 BAJ50058.1 - 0.017 15.0 0.1 0.025 14.5 0.1 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 BAJ50058.1 - 0.11 11.6 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Sacchrp_dh_NADP PF03435.18 BAJ50058.1 - 0.12 12.6 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain RmlD_sub_bind PF04321.17 BAJ50058.1 - 0.21 10.7 0.0 0.3 10.1 0.0 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain DNA_binding_1 PF01035.20 BAJ50059.1 - 1.6e-28 98.7 0.0 2.5e-28 98.0 0.0 1.3 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Rdx PF10262.9 BAJ50060.1 - 1.8e-18 66.5 0.0 2e-18 66.3 0.0 1.0 1 0 0 1 1 1 1 Rdx family PQQ PF01011.21 BAJ50061.1 - 7e-30 101.5 0.2 2.5e-06 27.2 0.0 7.2 8 0 0 8 8 8 6 PQQ enzyme repeat PQQ_2 PF13360.6 BAJ50061.1 - 3.2e-18 66.2 0.0 5.5e-07 29.4 0.0 3.6 3 1 0 3 3 3 3 PQQ-like domain PQQ_3 PF13570.6 BAJ50061.1 - 2.8e-09 37.2 4.4 0.074 13.6 0.1 6.8 6 1 0 6 6 6 2 PQQ-like domain ABC_tran PF00005.27 BAJ50064.1 - 2.2e-33 115.7 0.0 5e-33 114.5 0.0 1.6 2 0 0 2 2 2 1 ABC transporter TOBE_2 PF08402.10 BAJ50064.1 - 2.4e-08 34.0 0.1 3.7e-07 30.2 0.0 2.7 3 0 0 3 3 3 1 TOBE domain AAA_21 PF13304.6 BAJ50064.1 - 5.4e-06 26.4 0.0 0.03 14.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 BAJ50064.1 - 0.0011 19.4 0.2 0.002 18.5 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 BAJ50064.1 - 0.0022 18.0 0.0 0.0031 17.5 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain TOBE PF03459.17 BAJ50064.1 - 0.0032 17.7 0.0 0.029 14.7 0.0 2.4 1 1 0 1 1 1 1 TOBE domain AAA_22 PF13401.6 BAJ50064.1 - 0.0036 17.6 0.8 0.015 15.6 0.7 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 BAJ50064.1 - 0.0054 17.1 0.1 0.017 15.6 0.1 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 BAJ50064.1 - 0.029 14.3 0.1 0.077 12.9 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase IstB_IS21 PF01695.17 BAJ50064.1 - 0.091 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein SbcCD_C PF13558.6 BAJ50064.1 - 0.15 12.3 0.1 1.1 9.5 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 BAJ50064.1 - 0.19 11.5 0.0 0.4 10.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 BAJ50064.1 - 0.23 12.0 0.1 0.54 10.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain NMT1 PF09084.11 BAJ50065.1 - 4.3e-08 33.4 0.0 3.6e-07 30.4 0.0 2.2 1 1 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.20 BAJ50065.1 - 1.1e-05 25.0 0.0 2.4e-05 23.9 0.0 1.7 2 1 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 BAJ50065.1 - 1.1e-05 25.1 0.0 3.5e-05 23.5 0.0 1.5 1 1 0 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1_3 PF16868.5 BAJ50065.1 - 0.0013 18.3 0.0 0.02 14.3 0.0 2.0 2 0 0 2 2 2 1 NMT1-like family DUF592 PF04574.13 BAJ50065.1 - 0.05 13.4 0.0 0.083 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF592) BPD_transp_1 PF00528.22 BAJ50066.1 - 2.5e-16 60.0 48.0 2.9e-10 40.2 13.7 3.1 2 2 2 4 4 4 2 Binding-protein-dependent transport system inner membrane component MotA_ExbB PF01618.16 BAJ50066.1 - 2.5 7.8 5.0 26 4.6 0.1 3.7 3 0 0 3 3 3 0 MotA/TolQ/ExbB proton channel family SBP_bac_6 PF13343.6 BAJ50067.1 - 2.4e-24 86.1 0.1 3.8e-24 85.4 0.1 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 BAJ50067.1 - 4.3e-17 62.6 0.1 7.6e-17 61.8 0.1 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 BAJ50067.1 - 2.6e-16 60.3 0.2 6.2e-16 59.0 0.0 1.6 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 BAJ50067.1 - 5.4e-10 39.7 0.3 7.6e-06 26.1 0.2 2.4 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein HSBP1 PF06825.12 BAJ50067.1 - 0.17 11.8 0.0 0.35 10.8 0.0 1.5 1 0 0 1 1 1 0 Heat shock factor binding protein 1 MarR_2 PF12802.7 BAJ50068.1 - 8.3e-08 32.0 0.0 2.8e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 BAJ50068.1 - 4.5e-06 26.6 0.0 9.3e-06 25.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 BAJ50068.1 - 8.3e-06 25.3 0.0 1.9e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 BAJ50068.1 - 0.00018 21.3 0.1 0.00053 19.8 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.22 BAJ50068.1 - 0.0022 17.9 0.0 0.0052 16.7 0.0 1.6 1 0 0 1 1 1 1 MarR family B-block_TFIIIC PF04182.12 BAJ50068.1 - 0.0035 17.5 0.3 0.016 15.3 0.1 2.1 2 0 0 2 2 2 1 B-block binding subunit of TFIIIC HTH_IclR PF09339.10 BAJ50068.1 - 0.0041 16.9 0.0 0.0075 16.0 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 BAJ50068.1 - 0.012 15.5 0.1 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 BAJ50068.1 - 0.029 14.3 0.0 0.051 13.5 0.0 1.4 1 0 0 1 1 1 0 HTH domain Rrf2 PF02082.20 BAJ50068.1 - 0.032 14.6 0.0 0.1 12.9 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator HTH_Crp_2 PF13545.6 BAJ50068.1 - 0.033 14.2 0.0 0.085 12.8 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_27 PF13463.6 BAJ50068.1 - 0.066 13.7 0.0 0.29 11.6 0.0 2.1 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_CodY PF08222.11 BAJ50068.1 - 0.15 11.6 0.0 0.28 10.8 0.0 1.5 1 0 0 1 1 1 0 CodY helix-turn-helix domain RP-C PF03428.13 BAJ50068.1 - 0.19 11.3 0.1 1.5 8.5 0.0 2.1 2 0 0 2 2 2 0 Replication protein C N-terminal domain TENA_THI-4 PF03070.16 BAJ50069.1 - 1.4e-33 116.5 0.0 1.6e-33 116.3 0.0 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Phage_int_SAM_1 PF02899.17 BAJ50069.1 - 0.13 12.6 0.0 0.5 10.7 0.0 2.0 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain DUF1129 PF06570.11 BAJ50070.1 - 1.7 8.1 5.9 0.12 11.8 0.3 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) DUF2631 PF10939.8 BAJ50070.1 - 1.7 8.5 5.9 32 4.5 0.2 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2631) YdjM PF04307.14 BAJ50070.1 - 1.8 7.9 9.7 4 6.7 9.7 2.0 1 1 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Cupredoxin_1 PF13473.6 BAJ50071.1 - 8e-05 22.7 0.0 0.0084 16.2 0.0 2.2 1 1 0 1 1 1 1 Cupredoxin-like domain HIRAN PF08797.11 BAJ50071.1 - 0.067 13.1 0.0 0.11 12.4 0.0 1.4 1 1 1 2 2 2 0 HIRAN domain ABC_tran PF00005.27 BAJ50072.1 - 1.5e-36 126.0 0.0 2.7e-36 125.1 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50072.1 - 1e-11 45.2 0.7 7.4e-06 26.0 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 BAJ50072.1 - 1.4e-06 28.3 0.4 6.8e-06 26.2 0.4 2.1 2 0 0 2 2 2 1 TOBE domain Rad17 PF03215.15 BAJ50072.1 - 0.00042 20.3 0.0 0.00068 19.6 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 BAJ50072.1 - 0.00043 20.0 0.0 0.00092 18.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 BAJ50072.1 - 0.00053 19.5 0.1 0.0083 15.6 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAJ50072.1 - 0.0017 18.9 3.1 0.0059 17.1 3.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ50072.1 - 0.0025 18.2 0.0 0.0042 17.5 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 BAJ50072.1 - 0.0035 17.3 0.0 0.0064 16.4 0.0 1.5 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_19 PF13245.6 BAJ50072.1 - 0.015 15.6 0.2 0.17 12.2 0.2 2.4 2 1 0 2 2 2 0 AAA domain AAA PF00004.29 BAJ50072.1 - 0.019 15.4 0.0 0.056 13.9 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 BAJ50072.1 - 0.019 14.7 0.4 0.17 11.6 0.2 2.0 1 1 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.6 BAJ50072.1 - 0.037 14.3 0.1 0.082 13.2 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 BAJ50072.1 - 0.071 12.8 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 BAJ50072.1 - 0.1 11.7 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_18 PF13238.6 BAJ50072.1 - 0.11 13.1 1.0 0.51 10.9 0.1 2.3 1 1 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 BAJ50073.1 - 8e-06 25.7 16.2 8e-06 25.7 16.2 2.2 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 BAJ50074.1 - 2.3e-16 60.1 18.1 2.3e-16 60.1 18.1 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF4519 PF15012.6 BAJ50074.1 - 6.3 7.1 7.6 21 5.4 7.6 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) Kelch_1 PF01344.25 BAJ50075.1 - 9.5e-53 175.6 4.0 5.2e-11 41.9 0.1 6.2 6 0 0 6 6 6 6 Kelch motif Kelch_6 PF13964.6 BAJ50075.1 - 3.4e-35 119.2 0.0 1.3e-08 34.8 0.0 6.2 4 1 2 6 6 6 5 Kelch motif Kelch_3 PF13415.6 BAJ50075.1 - 5.4e-25 87.1 0.2 0.00019 21.6 0.0 5.8 5 0 0 5 5 5 4 Galactose oxidase, central domain Kelch_2 PF07646.15 BAJ50075.1 - 3.5e-24 83.8 0.0 0.00031 20.6 0.0 6.1 6 0 0 6 6 6 4 Kelch motif Kelch_4 PF13418.6 BAJ50075.1 - 3.1e-22 78.3 0.0 1.2e-05 25.2 0.0 5.6 5 1 0 5 5 5 5 Galactose oxidase, central domain Kelch_5 PF13854.6 BAJ50075.1 - 1.1e-11 44.4 3.6 0.028 14.4 0.0 6.2 7 0 0 7 7 7 4 Kelch motif PQQ_3 PF13570.6 BAJ50075.1 - 0.14 12.7 6.4 0.58 10.7 0.0 4.2 6 0 0 6 6 6 0 PQQ-like domain Med3 PF11593.8 BAJ50075.1 - 3.7 6.6 11.0 6 6.0 11.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF1206 PF06724.11 BAJ50076.1 - 0.48 10.5 13.4 1.1 9.4 1.3 2.9 1 1 2 3 3 3 0 Domain of Unknown Function (DUF1206) PQQ PF01011.21 BAJ50077.1 - 1.6e-26 90.9 13.2 6.8e-06 25.8 0.1 7.2 7 0 0 7 7 7 5 PQQ enzyme repeat PQQ_2 PF13360.6 BAJ50077.1 - 4.9e-16 59.0 3.2 0.00039 20.1 0.1 4.2 3 1 1 4 4 4 4 PQQ-like domain PQQ_3 PF13570.6 BAJ50077.1 - 7.2e-12 45.4 20.8 5.2e-05 23.6 0.6 7.8 7 1 0 7 7 7 2 PQQ-like domain Attachment_P66 PF11263.8 BAJ50077.1 - 0.072 12.3 0.3 0.12 11.6 0.3 1.3 1 0 0 1 1 1 0 Borrelia burgdorferi attachment protein P66 adh_short PF00106.25 BAJ50078.1 - 3.8e-58 196.2 0.1 4.9e-58 195.8 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 BAJ50078.1 - 5.1e-46 157.1 0.0 6.6e-46 156.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 BAJ50078.1 - 2.1e-09 37.6 0.1 2.9e-09 37.1 0.1 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 BAJ50078.1 - 0.0014 18.2 0.0 0.0018 17.7 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 BAJ50078.1 - 0.0038 16.6 0.0 0.0093 15.4 0.0 1.5 2 0 0 2 2 2 1 Fungal family of unknown function (DUF1776) Sacchrp_dh_NADP PF03435.18 BAJ50078.1 - 0.0043 17.3 0.1 0.01 16.1 0.1 1.6 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain DUF4322 PF14210.6 BAJ50078.1 - 0.095 12.6 0.6 9.8 6.2 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4322) Eno-Rase_NADH_b PF12242.8 BAJ50078.1 - 0.16 11.8 0.2 0.53 10.1 0.1 1.9 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Dicty_REP PF05086.12 BAJ50079.1 - 1.1 7.2 5.1 1.1 7.1 5.1 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein DUF4731 PF15875.5 BAJ50081.1 - 0.13 12.4 1.0 0.32 11.2 1.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) Zn_peptidase_2 PF04298.12 BAJ50081.1 - 0.72 9.2 4.5 0.19 11.1 1.1 1.7 1 1 1 2 2 2 0 Putative neutral zinc metallopeptidase DUF4231 PF14015.6 BAJ50081.1 - 4.8 7.7 5.7 7.1 7.2 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SBP_bac_1 PF01547.25 BAJ50082.1 - 6.8e-17 62.4 3.2 1.2e-16 61.6 3.2 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 BAJ50082.1 - 1.5e-12 47.9 0.0 1e-11 45.2 0.0 1.9 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein MFS_1 PF07690.16 BAJ50084.1 - 4.7e-40 137.6 38.4 4.7e-40 137.6 38.4 2.4 2 1 0 2 2 2 1 Major Facilitator Superfamily PUCC PF03209.15 BAJ50084.1 - 0.004 16.2 6.8 0.004 16.2 6.8 2.4 2 0 0 2 2 2 1 PUCC protein Sugar_tr PF00083.24 BAJ50084.1 - 0.0091 14.9 20.1 0.02 13.8 0.5 3.2 2 1 1 3 3 3 2 Sugar (and other) transporter FeoB_associated PF12669.7 BAJ50084.1 - 0.74 10.3 6.4 24 5.4 0.2 4.1 4 0 0 4 4 4 0 FeoB-associated Cys-rich membrane protein DUF4337 PF14235.6 BAJ50084.1 - 0.91 9.6 3.4 3.3 7.8 3.4 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Ceramidase PF05875.12 BAJ50084.1 - 3 7.2 8.9 7 6.0 3.1 3.3 1 1 0 2 2 2 0 Ceramidase PQQ PF01011.21 BAJ50085.1 - 1.1e-22 78.8 6.0 0.00091 19.0 0.0 7.3 7 0 0 7 7 7 5 PQQ enzyme repeat PQQ_2 PF13360.6 BAJ50085.1 - 3.5e-22 79.1 0.1 2.3e-08 33.9 0.1 4.1 3 2 1 4 4 4 3 PQQ-like domain PQQ_3 PF13570.6 BAJ50085.1 - 6.2e-21 74.3 11.2 2.9e-08 33.9 0.1 7.8 8 1 0 8 8 8 5 PQQ-like domain ABC_tran PF00005.27 BAJ50086.1 - 1.3e-28 100.3 0.0 2.4e-28 99.4 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50086.1 - 1.7e-10 41.2 0.1 0.00061 19.7 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAJ50086.1 - 0.00021 21.9 0.1 0.0006 20.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 BAJ50086.1 - 0.00027 21.5 1.7 0.86 10.2 0.0 3.2 2 1 1 3 3 3 2 AAA domain AAA_29 PF13555.6 BAJ50086.1 - 0.0065 16.2 0.0 0.014 15.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain IstB_IS21 PF01695.17 BAJ50086.1 - 0.0084 15.9 0.0 0.11 12.2 0.0 2.4 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_16 PF13191.6 BAJ50086.1 - 0.0092 16.4 0.0 0.016 15.6 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_27 PF13514.6 BAJ50086.1 - 0.015 14.9 0.0 0.031 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ50086.1 - 0.016 15.7 0.2 0.12 12.8 0.2 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 BAJ50086.1 - 0.034 14.0 0.3 0.3 11.0 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase AAA_19 PF13245.6 BAJ50086.1 - 0.036 14.4 1.0 0.17 12.2 0.7 2.3 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 BAJ50086.1 - 0.084 13.1 2.0 0.33 11.2 1.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_14 PF13173.6 BAJ50086.1 - 0.093 12.8 0.1 0.78 9.8 0.0 2.5 3 0 0 3 3 3 0 AAA domain AAA_24 PF13479.6 BAJ50086.1 - 0.2 11.4 0.5 0.5 10.1 0.0 2.0 2 1 1 3 3 3 0 AAA domain SMC_N PF02463.19 BAJ50086.1 - 0.23 10.8 0.4 0.85 9.0 0.0 2.0 2 1 1 3 3 3 0 RecF/RecN/SMC N terminal domain NTPase_1 PF03266.15 BAJ50086.1 - 0.24 11.3 1.8 1.1 9.1 0.1 2.3 2 0 0 2 2 2 0 NTPase ABC2_membrane_2 PF12679.7 BAJ50087.1 - 1.5e-17 63.8 30.7 3.8e-16 59.2 30.7 2.1 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 BAJ50087.1 - 3.5e-08 33.6 17.5 3.5e-08 33.6 17.5 2.1 2 1 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 BAJ50087.1 - 2.4e-07 30.2 31.6 2.4e-07 30.2 31.6 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 BAJ50087.1 - 2.1e-05 24.0 25.9 2.1e-05 24.0 25.9 2.0 2 1 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_5 PF13346.6 BAJ50087.1 - 4.7 6.7 30.6 0.009 15.6 16.9 2.5 2 1 1 3 3 3 0 ABC-2 family transporter protein PQQ PF01011.21 BAJ50088.1 - 6.9e-18 63.6 0.4 5.4e-06 26.1 0.0 6.5 6 0 0 6 6 6 3 PQQ enzyme repeat PQQ_2 PF13360.6 BAJ50088.1 - 4.1e-17 62.6 0.0 3.3e-05 23.6 0.0 3.4 3 0 0 3 3 3 3 PQQ-like domain PQQ_3 PF13570.6 BAJ50088.1 - 3e-07 30.7 6.4 0.0088 16.5 0.6 5.3 5 0 0 5 5 5 3 PQQ-like domain SBBP PF06739.11 BAJ50088.1 - 0.12 12.4 0.3 0.33 11.0 0.3 1.7 1 0 0 1 1 1 0 Beta-propeller repeat DUF5336 PF17270.2 BAJ50088.1 - 0.24 11.0 2.7 0.12 11.9 0.3 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5336) DUF4083 PF13314.6 BAJ50088.1 - 5.2 7.1 4.6 1 9.4 0.5 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) Cupredoxin_1 PF13473.6 BAJ50089.1 - 7.8e-09 35.6 0.0 8.7e-09 35.4 0.0 1.1 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 BAJ50089.1 - 0.0014 19.0 0.0 0.024 15.1 0.0 2.2 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family SPRY PF00622.28 BAJ50089.1 - 0.011 15.9 0.0 0.016 15.3 0.0 1.3 1 1 0 1 1 1 0 SPRY domain Pox_VP8_L4R PF04498.12 BAJ50089.1 - 0.029 14.0 0.0 0.034 13.8 0.0 1.1 1 0 0 1 1 1 0 Poxvirus nucleic acid binding protein VP8/L4R EamA PF00892.20 BAJ50090.1 - 1.2e-14 54.6 23.9 1.4e-14 54.4 23.9 1.0 1 0 0 1 1 1 1 EamA-like transporter family UAA PF08449.11 BAJ50090.1 - 0.00013 21.3 5.7 0.00015 21.1 5.7 1.2 1 1 0 1 1 1 1 UAA transporter family TMEM234 PF10639.9 BAJ50090.1 - 0.011 15.8 5.7 0.019 15.0 5.7 1.6 1 1 0 1 1 1 0 Putative transmembrane family 234 DUF2070 PF09843.9 BAJ50090.1 - 9 4.5 16.9 11 4.2 16.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Aldedh PF00171.22 BAJ50091.1 - 3.7e-126 421.3 0.5 4.2e-126 421.2 0.5 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LUD_dom PF02589.15 BAJ50091.1 - 0.01 15.5 0.0 0.024 14.3 0.0 1.6 1 0 0 1 1 1 0 LUD domain TetR_C_36 PF18598.1 BAJ50091.1 - 0.09 12.7 0.4 0.29 11.1 0.1 2.0 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain AA_synth PF06684.11 BAJ50092.1 - 7.1e-70 234.1 0.1 8e-70 233.9 0.1 1.0 1 0 0 1 1 1 1 Amino acid synthesis BPD_transp_2 PF02653.16 BAJ50093.1 - 1e-30 106.8 39.1 1.4e-30 106.4 39.1 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 BAJ50094.1 - 7.3e-32 110.6 47.5 1e-31 110.1 47.5 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF2649 PF10854.8 BAJ50094.1 - 0.46 10.8 0.1 0.46 10.8 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2649) ABC_tran PF00005.27 BAJ50095.1 - 1.6e-33 116.1 0.1 2.5e-33 115.5 0.1 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50095.1 - 1.1e-11 45.1 2.7 1.9e-05 24.7 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 BAJ50095.1 - 6.6e-05 23.4 0.1 0.0001 22.7 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 BAJ50095.1 - 0.0001 22.1 1.2 0.00036 20.3 0.9 2.0 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 BAJ50095.1 - 0.0004 20.4 0.0 0.026 14.4 0.0 2.1 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_19 PF13245.6 BAJ50095.1 - 0.00092 19.6 1.8 0.0033 17.8 1.7 1.9 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 BAJ50095.1 - 0.0013 18.4 0.1 0.0029 17.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 BAJ50095.1 - 0.0016 19.0 1.4 0.0055 17.2 0.1 2.0 2 0 0 2 2 2 1 AAA domain DLIC PF05783.11 BAJ50095.1 - 0.0019 17.1 0.4 0.0029 16.5 0.4 1.2 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) Mg_chelatase PF01078.21 BAJ50095.1 - 0.0035 16.7 1.1 0.086 12.2 0.1 2.1 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI cobW PF02492.19 BAJ50095.1 - 0.004 16.8 0.5 0.095 12.3 0.4 2.1 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain SMC_N PF02463.19 BAJ50095.1 - 0.0049 16.3 1.1 0.17 11.3 0.1 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain PIF1 PF05970.14 BAJ50095.1 - 0.0055 15.9 0.2 0.015 14.5 0.1 1.7 2 0 0 2 2 2 1 PIF1-like helicase SRP54 PF00448.22 BAJ50095.1 - 0.0064 16.1 1.1 0.013 15.1 1.1 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_14 PF13173.6 BAJ50095.1 - 0.0072 16.4 0.2 0.31 11.1 0.1 2.2 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 BAJ50095.1 - 0.0087 16.0 2.2 0.0097 15.8 0.3 2.0 3 0 0 3 3 2 1 NACHT domain AAA_22 PF13401.6 BAJ50095.1 - 0.013 15.8 1.6 0.2 11.9 0.2 2.1 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 BAJ50095.1 - 0.013 15.2 0.0 0.17 11.5 0.0 2.0 1 1 1 2 2 2 0 AAA ATPase domain ABC_ATPase PF09818.9 BAJ50095.1 - 0.018 13.9 0.7 1.2 7.9 0.4 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_25 PF13481.6 BAJ50095.1 - 0.023 14.3 0.2 0.044 13.3 0.2 1.4 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 BAJ50095.1 - 0.032 14.2 0.3 0.11 12.4 0.1 1.8 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 BAJ50095.1 - 0.035 14.0 0.2 0.063 13.2 0.2 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_28 PF13521.6 BAJ50095.1 - 0.04 14.2 0.4 0.48 10.7 0.3 2.1 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 BAJ50095.1 - 0.044 13.5 0.1 0.066 12.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 BAJ50095.1 - 0.061 12.4 0.2 0.11 11.5 0.2 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_27 PF13514.6 BAJ50095.1 - 0.064 12.8 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 BAJ50095.1 - 0.065 12.5 0.1 2.3 7.5 0.1 2.1 2 0 0 2 2 2 0 Zeta toxin TsaE PF02367.17 BAJ50095.1 - 0.11 12.5 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 BAJ50095.1 - 0.12 12.7 1.4 0.19 12.1 1.4 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 BAJ50095.1 - 0.13 12.5 0.3 0.59 10.4 0.3 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit NB-ARC PF00931.22 BAJ50095.1 - 0.14 11.3 1.4 0.28 10.3 0.2 1.9 2 1 1 3 3 3 0 NB-ARC domain AAA_33 PF13671.6 BAJ50095.1 - 0.15 12.2 0.3 0.23 11.6 0.3 1.6 1 1 0 1 1 1 0 AAA domain PRK PF00485.18 BAJ50095.1 - 0.16 11.7 0.0 0.43 10.3 0.0 1.9 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NTPase_1 PF03266.15 BAJ50095.1 - 0.2 11.6 1.9 0.46 10.4 0.6 2.0 2 1 0 2 2 2 0 NTPase ABC_tran PF00005.27 BAJ50096.1 - 7.2e-26 91.3 0.0 1.3e-25 90.5 0.0 1.4 2 0 0 2 2 2 1 ABC transporter BCA_ABC_TP_C PF12399.8 BAJ50096.1 - 2.8e-08 33.5 0.3 6.4e-08 32.3 0.3 1.7 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 BAJ50096.1 - 0.00024 21.0 0.3 0.0013 18.6 0.2 1.8 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAJ50096.1 - 0.00088 19.8 0.2 0.00088 19.8 0.2 1.5 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 BAJ50096.1 - 0.0021 17.8 0.0 0.0042 16.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 BAJ50096.1 - 0.0043 17.3 0.1 1.6 9.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 BAJ50096.1 - 0.0044 16.8 0.1 0.054 13.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 BAJ50096.1 - 0.01 14.7 0.4 2.7 6.7 0.0 2.5 2 1 0 2 2 2 0 Predicted ATPase of the ABC class TniB PF05621.11 BAJ50096.1 - 0.017 14.5 0.2 0.21 11.0 0.1 2.0 2 0 0 2 2 2 0 Bacterial TniB protein AAA_25 PF13481.6 BAJ50096.1 - 0.022 14.3 0.0 4.4 6.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 BAJ50096.1 - 0.023 14.1 0.2 0.066 12.6 0.1 1.7 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 BAJ50096.1 - 0.024 14.5 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase IstB_IS21 PF01695.17 BAJ50096.1 - 0.026 14.3 0.2 5.7 6.6 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_15 PF13175.6 BAJ50096.1 - 0.026 14.2 0.2 0.035 13.8 0.2 1.1 1 0 0 1 1 1 0 AAA ATPase domain ATPase_2 PF01637.18 BAJ50096.1 - 0.049 13.5 0.1 0.2 11.6 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea PEPcase PF00311.17 BAJ50096.1 - 0.05 11.7 0.1 0.059 11.4 0.1 1.0 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase AAA_27 PF13514.6 BAJ50096.1 - 0.066 12.8 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain Phage_tail_X PF05489.12 BAJ50096.1 - 0.13 12.0 0.1 0.34 10.6 0.0 1.7 2 0 0 2 2 2 0 Phage Tail Protein X Peripla_BP_6 PF13458.6 BAJ50097.1 - 1.2e-56 192.8 0.5 1.4e-56 192.6 0.5 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 BAJ50097.1 - 2.4e-22 79.5 0.0 3.2e-22 79.1 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 BAJ50097.1 - 6e-22 78.1 0.0 1.9e-21 76.5 0.0 1.6 1 1 0 1 1 1 1 Periplasmic binding protein domain LPAM_1 PF08139.12 BAJ50097.1 - 0.21 12.2 1.1 0.86 10.2 1.1 2.2 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Bac_luciferase PF00296.20 BAJ50098.1 - 3.5e-51 174.5 0.0 1.5e-49 169.2 0.0 2.2 1 1 0 1 1 1 1 Luciferase-like monooxygenase Amidohydro_1 PF01979.20 BAJ50099.1 - 1.4e-11 44.3 1.7 2.1e-10 40.4 1.7 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 BAJ50099.1 - 3.8e-09 36.5 2.5 0.0003 20.4 0.2 3.0 2 1 0 2 2 2 2 Amidohydrolase family TatD_DNase PF01026.21 BAJ50099.1 - 4.8e-06 26.1 0.0 7.2e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 TatD related DNase FAD_binding_4 PF01565.23 BAJ50099.1 - 0.0028 17.4 0.2 0.011 15.5 0.1 2.1 2 1 0 2 2 2 1 FAD binding domain MR_MLE_C PF13378.6 BAJ50099.1 - 0.023 14.3 0.0 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 Enolase C-terminal domain-like Ald_Xan_dh_C2 PF02738.18 BAJ50100.1 - 2.1e-166 554.6 0.7 2.8e-166 554.2 0.1 1.4 2 0 0 2 2 2 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50100.1 - 7.5e-19 68.1 0.0 1.5e-18 67.1 0.0 1.6 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SIMPL PF04402.14 BAJ50101.1 - 1.8e-40 139.6 3.4 2.5e-40 139.1 3.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF541) EamA PF00892.20 BAJ50102.1 - 4.9e-31 107.7 41.7 4.8e-19 68.9 16.0 2.0 2 0 0 2 2 2 2 EamA-like transporter family OCD_Mu_crystall PF02423.15 BAJ50103.1 - 2.3e-79 266.6 0.1 2.6e-79 266.5 0.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 BAJ50103.1 - 0.00031 20.8 0.0 0.00068 19.7 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 BAJ50103.1 - 0.0013 19.2 0.0 0.0032 18.0 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 BAJ50103.1 - 0.054 14.3 0.0 0.096 13.5 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Peptidase_S8 PF00082.22 BAJ50104.1 - 1e-45 156.3 4.1 3.2e-26 92.3 0.9 2.5 2 1 0 3 3 3 2 Subtilase family Osw5 PF17062.5 BAJ50104.1 - 0.086 12.9 0.4 0.19 11.8 0.4 1.6 1 0 0 1 1 1 0 Outer spore wall 5 Pribosyltran PF00156.27 BAJ50105.1 - 3.8e-13 49.2 0.1 4.7e-13 49.0 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain MFS_1 PF07690.16 BAJ50106.1 - 3.2e-25 88.8 51.0 4.1e-25 88.5 42.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 BAJ50106.1 - 2.3e-08 33.7 31.8 3e-08 33.4 31.8 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB OATP PF03137.20 BAJ50106.1 - 0.17 10.2 7.2 0.096 11.0 2.5 2.3 2 1 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family MFS_1_like PF12832.7 BAJ50106.1 - 0.47 9.3 18.1 0.086 11.7 11.4 2.4 1 1 1 2 2 2 0 MFS_1 like family Acyl-CoA_dh_1 PF00441.24 BAJ50107.1 - 2e-35 122.2 0.1 2.7e-35 121.8 0.1 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 BAJ50107.1 - 3.3e-19 68.9 0.0 6.4e-19 68.0 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 BAJ50107.1 - 1.9e-16 60.6 0.1 3.2e-16 59.8 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 BAJ50107.1 - 5.8e-14 52.7 0.0 1.3e-13 51.6 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Nterm_IS4 PF13006.7 BAJ50107.1 - 0.022 14.9 0.0 0.078 13.2 0.0 1.9 1 0 0 1 1 1 0 Insertion element 4 transposase N-terminal OCD_Mu_crystall PF02423.15 BAJ50108.1 - 1.5e-63 214.7 0.2 1.8e-63 214.4 0.2 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 BAJ50108.1 - 4.5e-07 30.0 0.0 1.1e-06 28.7 0.0 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 BAJ50108.1 - 0.029 14.9 0.1 0.08 13.5 0.1 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.24 BAJ50108.1 - 0.047 14.1 0.0 0.13 12.7 0.0 1.8 1 1 1 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 BAJ50108.1 - 0.087 13.3 0.1 0.2 12.1 0.1 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding OTCace PF00185.24 BAJ50108.1 - 0.11 12.5 0.0 0.33 11.0 0.0 1.8 2 0 0 2 2 2 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMP-binding_C_2 PF14535.6 BAJ50109.1 - 2.7e-23 82.1 0.1 4.6e-23 81.3 0.1 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 BAJ50109.1 - 6.2e-13 48.1 2.6 2.9e-12 45.9 2.6 1.8 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.12 BAJ50109.1 - 6.9e-05 22.1 0.0 0.021 13.9 0.0 2.1 2 0 0 2 2 2 2 Acyl-protein synthetase, LuxE FAA_hydrolase PF01557.18 BAJ50110.1 - 3.4e-65 219.8 0.0 4.1e-65 219.5 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Scm3 PF10384.9 BAJ50110.1 - 0.13 12.0 0.0 0.3 10.8 0.0 1.6 1 0 0 1 1 1 0 Centromere protein Scm3 HMGL-like PF00682.19 BAJ50111.1 - 2.2e-65 220.9 0.1 2.9e-65 220.5 0.1 1.2 1 0 0 1 1 1 1 HMGL-like RelB PF04221.12 BAJ50111.1 - 0.0029 17.5 0.0 0.0092 15.9 0.0 1.9 2 0 0 2 2 2 1 RelB antitoxin E1_dh PF00676.20 BAJ50112.1 - 1e-83 280.7 0.0 1.2e-83 280.5 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 BAJ50112.1 - 2.7e-06 26.8 0.0 4.3e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 BAJ50112.1 - 5e-05 23.1 0.4 0.00047 20.0 0.4 2.1 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DUF1015 PF06245.11 BAJ50113.1 - 5.3e-10 38.7 0.0 4.7e-09 35.6 0.0 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1015) ParBc PF02195.18 BAJ50113.1 - 5.5e-08 33.0 0.0 1.1e-07 32.1 0.0 1.4 1 0 0 1 1 1 1 ParB-like nuclease domain 2-Hacid_dh_C PF02826.19 BAJ50114.1 - 5.8e-70 234.3 0.1 8.2e-70 233.8 0.1 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 BAJ50114.1 - 5.5e-32 110.2 0.3 6.3e-32 110.1 0.3 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 BAJ50114.1 - 5.9e-10 39.4 0.2 1.1e-09 38.6 0.2 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.15 BAJ50114.1 - 8e-10 39.1 0.5 3.2e-09 37.2 0.1 2.0 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 BAJ50114.1 - 3.9e-05 23.0 0.8 0.0001 21.6 0.8 1.7 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain IlvN PF07991.12 BAJ50114.1 - 9e-05 22.1 0.1 0.00026 20.6 0.0 1.8 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 3HCDH_N PF02737.18 BAJ50114.1 - 0.0019 18.1 0.3 0.0019 18.1 0.3 2.0 2 1 1 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XdhC_C PF13478.6 BAJ50114.1 - 0.0097 16.4 0.0 0.038 14.5 0.0 2.0 2 0 0 2 2 2 1 XdhC Rossmann domain F420_oxidored PF03807.17 BAJ50114.1 - 0.019 15.5 0.1 0.078 13.6 0.1 2.2 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent ELFV_dehydrog PF00208.21 BAJ50114.1 - 0.045 13.5 0.1 0.082 12.6 0.1 1.4 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Oxidored_nitro PF00148.19 BAJ50114.1 - 0.046 12.4 0.1 0.24 10.1 0.1 1.9 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase Gp_dh_N PF00044.24 BAJ50114.1 - 0.075 13.4 0.0 0.17 12.3 0.0 1.6 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DpaA_N PF16924.5 BAJ50114.1 - 0.13 12.4 0.0 0.32 11.1 0.0 1.7 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain TrkA_N PF02254.18 BAJ50114.1 - 0.15 12.3 1.3 0.47 10.7 0.1 2.5 3 0 0 3 3 3 0 TrkA-N domain DapB_N PF01113.20 BAJ50114.1 - 0.24 11.5 1.6 0.7 10.0 0.7 2.3 2 1 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus Ribosomal_S26e PF01283.19 BAJ50115.1 - 4.1e-19 69.0 1.4 5.4e-19 68.6 1.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S26e zf-dskA_traR PF01258.17 BAJ50115.1 - 0.017 15.1 0.4 2.7 8.0 0.0 2.3 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger Lar_restr_allev PF14354.6 BAJ50115.1 - 0.059 13.8 0.2 0.22 11.9 0.1 1.8 1 1 1 2 2 2 0 Restriction alleviation protein Lar Peptidase_M48 PF01435.18 BAJ50116.1 - 8.5e-40 136.6 0.0 1.2e-39 136.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 BAJ50116.1 - 0.00013 21.3 0.2 0.00028 20.2 0.0 1.6 2 0 0 2 2 2 1 BlaR1 peptidase M56 tRNA-synt_2b PF00587.25 BAJ50117.1 - 1.5e-32 113.0 0.0 4.3e-32 111.5 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 BAJ50117.1 - 1.3e-17 63.7 0.8 3.5e-17 62.3 0.4 2.0 2 0 0 2 2 2 1 Anticodon binding domain ProRS-C_1 PF09180.11 BAJ50117.1 - 1.1e-13 51.2 0.1 2.4e-13 50.1 0.1 1.6 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal Vps53_N PF04100.12 BAJ50117.1 - 0.091 11.7 0.1 0.17 10.8 0.1 1.4 1 0 0 1 1 1 0 Vps53-like, N-terminal DUF4258 PF14076.6 BAJ50118.1 - 2.8e-05 24.4 1.4 3.4e-05 24.1 0.3 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4258) PBECR3 PF18812.1 BAJ50118.1 - 0.00057 19.8 0.2 0.00074 19.5 0.2 1.1 1 0 0 1 1 1 1 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 PBECR2 PF18810.1 BAJ50118.1 - 0.0025 18.1 0.2 0.003 17.9 0.2 1.1 1 0 0 1 1 1 1 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2 GSAP-16 PF14959.6 BAJ50118.1 - 0.1 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 gamma-Secretase-activating protein C-term DUF2283 PF10049.9 BAJ50119.1 - 2.8e-18 65.9 3.1 3.8e-18 65.4 3.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2283) ATP-synt_D PF01813.17 BAJ50120.1 - 2.4e-53 180.9 9.0 2.7e-53 180.7 9.0 1.0 1 0 0 1 1 1 1 ATP synthase subunit D Polysacc_synt_C PF14667.6 BAJ50121.1 - 0.012 15.7 3.6 0.012 15.7 3.6 2.4 2 1 0 2 2 2 0 Polysaccharide biosynthesis C-terminal domain Asp_protease_2 PF13650.6 BAJ50122.1 - 1.1e-06 29.1 0.1 1.4e-06 28.8 0.1 1.2 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 BAJ50122.1 - 5.9e-06 26.7 0.0 8.5e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease CBS PF00571.28 BAJ50122.1 - 0.017 15.5 0.1 0.035 14.5 0.1 1.6 1 0 0 1 1 1 0 CBS domain HEPN PF05168.14 BAJ50123.1 - 1.8e-27 95.8 0.1 2.1e-27 95.6 0.1 1.0 1 0 0 1 1 1 1 HEPN domain Vps52 PF04129.12 BAJ50123.1 - 0.15 10.8 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 Vps52 / Sac2 family NTP_transf_2 PF01909.23 BAJ50124.1 - 3.3e-07 30.5 0.1 4.2e-07 30.2 0.1 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ50124.1 - 9.6e-07 28.8 0.0 1.3e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF294 PF03445.13 BAJ50124.1 - 0.014 15.2 0.0 0.022 14.6 0.0 1.4 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 PMBR PF09373.10 BAJ50124.1 - 0.025 14.8 0.1 0.079 13.2 0.0 1.9 2 0 0 2 2 2 0 Pseudomurein-binding repeat NTP_transferase PF00483.23 BAJ50125.1 - 1.5e-26 93.5 0.0 2.6e-26 92.7 0.0 1.3 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 BAJ50125.1 - 1.5e-08 35.2 0.0 2.5e-08 34.4 0.0 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain UDPG_MGDP_dh_N PF03721.14 BAJ50126.1 - 1.2e-55 188.0 0.0 2e-55 187.3 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 BAJ50126.1 - 4.6e-37 126.1 0.1 9.1e-37 125.2 0.1 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 BAJ50126.1 - 1e-32 112.6 0.0 2.1e-32 111.6 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 BAJ50126.1 - 1.8e-07 31.5 0.0 0.00031 20.9 0.0 2.6 2 1 0 2 2 2 2 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 BAJ50126.1 - 6.9e-07 29.3 0.0 4.5e-06 26.7 0.0 2.3 2 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 BAJ50126.1 - 2.8e-06 27.8 0.2 0.017 15.7 0.0 3.3 3 1 0 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 BAJ50126.1 - 5.7e-06 25.8 0.1 0.0022 17.4 0.0 2.5 2 1 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 BAJ50126.1 - 5.2e-05 23.3 0.0 0.00051 20.1 0.0 2.5 3 0 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 BAJ50126.1 - 0.00024 20.8 0.0 0.00064 19.4 0.0 1.7 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA TrkA_N PF02254.18 BAJ50126.1 - 0.00034 20.8 0.1 0.0078 16.5 0.0 2.5 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_7 PF13241.6 BAJ50126.1 - 0.00048 20.5 0.1 3.6 8.1 0.0 3.2 3 0 0 3 3 3 2 Putative NAD(P)-binding DAO PF01266.24 BAJ50126.1 - 0.0034 17.0 0.6 0.0083 15.7 0.6 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase Ldh_1_N PF00056.23 BAJ50126.1 - 0.0087 16.2 0.1 0.062 13.4 0.0 2.3 2 1 0 2 2 2 1 lactate/malate dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 BAJ50126.1 - 0.011 15.1 0.6 0.019 14.3 0.1 1.7 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.6 BAJ50126.1 - 0.064 13.5 0.2 0.17 12.2 0.2 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 BAJ50126.1 - 0.073 13.6 0.6 0.41 11.2 0.2 2.5 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 BAJ50126.1 - 0.077 12.2 0.2 0.23 10.6 0.2 1.7 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase CbiA PF01656.23 BAJ50126.1 - 0.1 12.6 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain FAD_binding_3 PF01494.19 BAJ50126.1 - 0.2 10.9 0.0 0.28 10.4 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain Glycos_transf_1 PF00534.20 BAJ50127.1 - 7.9e-39 132.9 0.0 1.1e-38 132.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 BAJ50127.1 - 2.2e-27 96.1 0.0 4e-27 95.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 BAJ50127.1 - 3e-13 50.0 0.0 5.2e-13 49.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 BAJ50127.1 - 1.2e-07 32.3 0.7 3.6e-07 30.7 0.7 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 BAJ50128.1 - 2.7e-17 62.8 0.0 4.5e-17 62.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 BAJ50128.1 - 4.8e-11 43.2 0.0 9.4e-11 42.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 BAJ50128.1 - 1.2e-07 31.9 0.6 1.8e-07 31.3 0.6 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 BAJ50128.1 - 0.00015 22.3 0.5 0.00032 21.2 0.1 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 BAJ50128.1 - 0.0028 17.7 0.0 0.0068 16.4 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase 4-like Epimerase PF01370.21 BAJ50129.1 - 5.9e-22 78.3 0.0 7.4e-22 78.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 BAJ50129.1 - 2.1e-12 46.6 0.2 2.8e-12 46.2 0.2 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 BAJ50129.1 - 1.2e-11 44.7 0.0 4.7e-11 42.7 0.0 1.7 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 BAJ50129.1 - 4.8e-09 35.7 0.0 6.9e-09 35.2 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 BAJ50129.1 - 2.3e-06 27.0 1.9 0.023 13.9 0.3 2.7 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 BAJ50129.1 - 0.0016 18.4 0.2 0.0023 17.9 0.2 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 BAJ50129.1 - 0.013 15.1 0.1 0.026 14.1 0.1 1.5 1 0 0 1 1 1 0 NmrA-like family Sacchrp_dh_NADP PF03435.18 BAJ50129.1 - 0.019 15.2 0.5 0.04 14.2 0.5 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox PF00070.27 BAJ50129.1 - 0.046 14.3 0.4 0.35 11.5 0.5 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase adh_short PF00106.25 BAJ50129.1 - 0.11 12.0 0.2 0.31 10.5 0.2 1.7 1 0 0 1 1 1 0 short chain dehydrogenase 2-Hacid_dh_C PF02826.19 BAJ50129.1 - 0.19 11.1 0.1 0.44 9.9 0.0 1.6 1 1 1 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Methyltransf_11 PF08241.12 BAJ50130.1 - 4.2e-10 40.1 0.0 6.3e-10 39.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ50130.1 - 1.8e-08 34.9 0.0 2.8e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAJ50130.1 - 9.4e-08 32.1 0.0 1.2e-07 31.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAJ50130.1 - 3.2e-05 23.8 0.0 4.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAJ50130.1 - 0.00011 22.9 0.0 0.00015 22.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 BAJ50130.1 - 0.026 13.8 0.0 0.036 13.4 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_29 PF03141.16 BAJ50130.1 - 0.047 12.2 0.0 0.085 11.4 0.0 1.3 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_9 PF08003.11 BAJ50130.1 - 0.061 12.2 0.0 0.071 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) CpcD PF01383.21 BAJ50130.1 - 0.16 12.3 0.0 0.29 11.4 0.0 1.4 1 0 0 1 1 1 0 CpcD/allophycocyanin linker domain Glyco_trans_1_4 PF13692.6 BAJ50132.1 - 7.5e-21 75.0 0.0 1.3e-20 74.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 BAJ50132.1 - 3e-14 52.9 0.0 4.7e-14 52.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 BAJ50132.1 - 1.1e-08 35.3 0.0 1.8e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 BAJ50132.1 - 3e-08 33.9 0.2 8.1e-08 32.4 0.0 1.9 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 BAJ50132.1 - 6.5e-06 26.7 0.1 2e-05 25.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 BAJ50133.1 - 2.3e-46 157.4 0.1 3.3e-46 157.0 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 BAJ50133.1 - 1.2e-33 116.4 0.0 2.8e-33 115.2 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 BAJ50133.1 - 3.5e-16 59.7 0.1 7e-16 58.7 0.0 1.5 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 BAJ50133.1 - 9.6e-10 38.7 0.0 2e-09 37.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 BAJ50133.1 - 6.9e-09 36.3 0.0 1.2e-08 35.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 BAJ50133.1 - 2.2e-06 27.8 0.1 5.2e-06 26.5 0.1 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glycogen_syn PF05693.13 BAJ50133.1 - 0.023 13.3 0.0 0.031 12.8 0.0 1.2 1 0 0 1 1 1 0 Glycogen synthase GDP_Man_Dehyd PF16363.5 BAJ50134.1 - 3.3e-59 200.9 0.0 8.3e-59 199.6 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 BAJ50134.1 - 9.9e-54 182.3 0.0 1.2e-53 182.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 BAJ50134.1 - 1.4e-18 67.0 0.0 1.3e-17 63.9 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 BAJ50134.1 - 1.2e-13 50.9 0.0 1.8e-13 50.2 0.0 1.3 1 1 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 BAJ50134.1 - 2.1e-11 43.3 0.0 3e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 BAJ50134.1 - 6.2e-11 41.9 0.0 8.8e-10 38.2 0.0 2.5 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 BAJ50134.1 - 7.4e-06 26.0 0.0 1.6e-05 24.9 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding KR PF08659.10 BAJ50134.1 - 0.00013 22.0 0.0 0.00023 21.1 0.0 1.4 1 0 0 1 1 1 1 KR domain adh_short PF00106.25 BAJ50134.1 - 0.012 15.1 0.0 0.022 14.2 0.0 1.6 1 0 0 1 1 1 0 short chain dehydrogenase HEPN PF05168.14 BAJ50135.1 - 1.2e-05 25.5 0.0 1.3e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 HEPN domain NTP_transf_2 PF01909.23 BAJ50136.1 - 9.8e-10 38.6 0.0 1.7e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ50136.1 - 1.3e-07 31.5 0.0 2.6e-07 30.6 0.0 1.5 2 0 0 2 2 2 1 Polymerase beta, Nucleotidyltransferase DUF294 PF03445.13 BAJ50136.1 - 0.00022 21.1 0.0 0.00051 19.9 0.0 1.5 2 0 0 2 2 2 1 Putative nucleotidyltransferase DUF294 Ribosomal_S30 PF04758.14 BAJ50137.1 - 1.2e-12 47.9 1.0 1.3e-12 47.7 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S30 LPAM_1 PF08139.12 BAJ50140.1 - 1.7 9.3 3.5 3.9 8.1 2.4 2.0 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site Nop PF01798.18 BAJ50141.1 - 1e-59 201.8 0.0 1.4e-59 201.4 0.0 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin T2SSF PF00482.23 BAJ50141.1 - 0.1 12.5 1.4 7.3 6.6 0.1 2.9 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein F TrbH PF07283.11 BAJ50141.1 - 0.18 12.0 0.0 0.37 11.0 0.0 1.4 1 0 0 1 1 1 0 Conjugal transfer protein TrbH Fibrillarin PF01269.17 BAJ50142.1 - 6.7e-91 303.4 0.0 7.5e-91 303.3 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.6 BAJ50142.1 - 0.00018 22.2 0.0 0.00028 21.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 BAJ50142.1 - 0.00041 20.2 0.0 0.00052 19.8 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GCD14 PF08704.10 BAJ50142.1 - 0.00049 19.8 0.0 0.00061 19.6 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_11 PF08241.12 BAJ50142.1 - 0.039 14.6 0.1 0.12 13.1 0.0 1.8 1 1 1 2 2 2 0 Methyltransferase domain FtsJ PF01728.19 BAJ50142.1 - 0.11 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase RNase_HII PF01351.18 BAJ50143.1 - 4.6e-37 127.8 0.0 5.6e-37 127.5 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII NTPase_1 PF03266.15 BAJ50144.1 - 6.8e-51 172.5 0.1 7.7e-51 172.3 0.1 1.0 1 0 0 1 1 1 1 NTPase AAA_30 PF13604.6 BAJ50144.1 - 0.00037 20.3 0.1 0.00064 19.5 0.1 1.5 1 1 0 1 1 1 1 AAA domain DUF2478 PF10649.9 BAJ50144.1 - 0.0034 17.0 0.0 0.0058 16.3 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2478) AAA_19 PF13245.6 BAJ50144.1 - 0.0079 16.5 0.3 0.12 12.7 0.3 2.2 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 BAJ50144.1 - 0.0081 15.2 0.3 0.017 14.1 0.3 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 BAJ50144.1 - 0.022 14.7 0.1 0.054 13.4 0.1 2.0 1 1 0 1 1 1 0 NACHT domain VirC1 PF07015.11 BAJ50144.1 - 0.037 13.3 0.0 0.07 12.4 0.0 1.4 1 0 0 1 1 1 0 VirC1 protein AAA_16 PF13191.6 BAJ50144.1 - 0.039 14.3 0.1 0.11 12.9 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain MobB PF03205.14 BAJ50144.1 - 0.056 13.3 0.1 0.098 12.6 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_22 PF13401.6 BAJ50144.1 - 0.072 13.4 0.1 0.53 10.6 0.1 2.3 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ50144.1 - 0.084 13.3 0.0 0.16 12.4 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 BAJ50144.1 - 0.095 12.4 0.0 0.69 9.6 0.0 2.1 1 1 0 1 1 1 0 AAA domain CbiA PF01656.23 BAJ50144.1 - 0.17 11.9 0.2 0.57 10.2 0.1 1.9 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain TRM PF02005.16 BAJ50145.1 - 1.3e-88 297.8 0.0 1.5e-88 297.5 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Met_10 PF02475.16 BAJ50145.1 - 4.1e-07 29.9 0.0 6.3e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_24 PF13578.6 BAJ50145.1 - 0.022 15.8 0.0 0.06 14.4 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain PrmA PF06325.13 BAJ50145.1 - 0.029 13.8 0.1 0.041 13.3 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.15 BAJ50145.1 - 0.038 13.6 0.0 0.067 12.8 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 MTS PF05175.14 BAJ50145.1 - 0.1 12.1 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Spermine_synth PF01564.17 BAJ50145.1 - 0.1 12.0 0.0 0.17 11.3 0.0 1.2 1 0 0 1 1 1 0 Spermine/spermidine synthase domain Methyltransf_31 PF13847.6 BAJ50145.1 - 0.18 11.6 0.0 0.3 10.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain FtsJ PF01728.19 BAJ50146.1 - 6.6e-43 146.9 0.0 7.6e-43 146.7 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase PCMT PF01135.19 BAJ50146.1 - 1.7e-06 27.9 0.0 2.1e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Fibrillarin PF01269.17 BAJ50146.1 - 1.4e-05 24.3 0.0 2.3e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Fibrillarin Methyltr_RsmB-F PF01189.17 BAJ50146.1 - 0.00011 21.9 0.0 0.0002 21.1 0.0 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_11 PF08241.12 BAJ50146.1 - 0.0022 18.6 0.1 0.0041 17.7 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 BAJ50146.1 - 0.0064 16.1 0.0 0.008 15.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 BAJ50146.1 - 0.011 15.5 0.0 0.019 14.8 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ50146.1 - 0.029 15.1 0.1 0.07 13.8 0.1 1.7 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 BAJ50146.1 - 0.035 14.0 0.0 0.076 12.8 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 BAJ50146.1 - 0.24 10.7 0.0 0.33 10.3 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) RNA_pol_Rpc34 PF05158.12 BAJ50147.1 - 0.0042 16.5 0.4 0.44 9.9 0.0 2.2 1 1 1 2 2 2 2 RNA polymerase Rpc34 subunit MarR PF01047.22 BAJ50147.1 - 0.017 15.1 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_34 PF13601.6 BAJ50147.1 - 0.067 13.4 0.0 0.092 12.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain TFIIB PF00382.19 BAJ50148.1 - 7.2e-23 80.4 1.1 1.6e-13 50.5 0.1 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat Rrf2 PF02082.20 BAJ50148.1 - 0.00018 21.8 0.1 0.11 12.8 0.0 2.4 2 0 0 2 2 2 2 Transcriptional regulator DUF4129 PF13559.6 BAJ50148.1 - 0.00087 19.5 0.6 0.0066 16.7 0.0 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4129) Cyclin_N PF00134.23 BAJ50148.1 - 0.088 12.5 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 Cyclin, N-terminal domain Gar1 PF04410.14 BAJ50149.1 - 1.4e-10 41.1 0.0 1.5e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region PRC PF05239.16 BAJ50149.1 - 0.017 15.2 0.1 0.023 14.7 0.1 1.4 1 0 0 1 1 1 0 PRC-barrel domain SRP19 PF01922.17 BAJ50150.1 - 1.2e-20 74.2 0.1 1.5e-20 73.9 0.1 1.1 1 0 0 1 1 1 1 SRP19 protein Ribosomal_S8e PF01201.22 BAJ50151.1 - 1e-26 93.7 2.1 1.3e-26 93.4 2.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S8e SMC_ScpB PF04079.16 BAJ50152.1 - 4.7e-34 117.3 0.1 5.8e-34 117.0 0.1 1.1 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB NitrOD5 PF11537.8 BAJ50152.1 - 0.1 12.7 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Nitrosopumilus output domain 5 HTH_20 PF12840.7 BAJ50152.1 - 0.11 12.6 0.0 0.33 11.0 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain SMC_ScpA PF02616.14 BAJ50153.1 - 2.4e-07 30.9 0.3 0.005 16.8 0.0 2.1 2 0 0 2 2 2 2 Segregation and condensation protein ScpA Rad21_Rec8 PF04824.16 BAJ50153.1 - 0.00021 20.5 0.0 0.00049 19.3 0.0 1.6 1 0 0 1 1 1 1 Conserved region of Rad21 / Rec8 like protein SANTA PF09133.10 BAJ50153.1 - 0.18 12.3 0.0 0.41 11.2 0.0 1.6 1 0 0 1 1 1 0 SANTA (SANT Associated) SMC_N PF02463.19 BAJ50154.1 - 7e-60 202.2 9.4 3e-59 200.1 9.4 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAJ50154.1 - 8.9e-12 45.4 14.2 2.3e-06 27.6 0.1 4.8 4 1 0 5 5 5 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 BAJ50154.1 - 1.2e-06 28.2 0.0 2.8e-05 23.8 0.0 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain DUF1664 PF07889.12 BAJ50154.1 - 0.028 14.5 72.9 0.031 14.3 5.6 8.1 5 3 4 9 9 9 0 Protein of unknown function (DUF1664) DNAPolymera_Pol PF11590.8 BAJ50154.1 - 0.077 12.9 1.0 0.27 11.2 1.0 1.9 1 0 0 1 1 1 0 DNA polymerase catalytic subunit Pol ABC_tran PF00005.27 BAJ50154.1 - 0.34 11.4 0.0 0.34 11.4 0.0 7.2 3 2 1 5 5 5 0 ABC transporter AAA_22 PF13401.6 BAJ50154.1 - 0.56 10.5 0.0 0.56 10.5 0.0 6.1 5 3 2 7 7 7 0 AAA domain AAA_23 PF13476.6 BAJ50154.1 - 1.3 9.5 128.8 8.7e+02 0.3 67.8 7.4 2 2 1 3 3 3 0 AAA domain Peptidase_M24 PF00557.24 BAJ50155.1 - 9.9e-24 84.2 0.0 1.2e-23 83.9 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Prenyltransf PF01255.19 BAJ50156.1 - 5.4e-75 251.8 0.0 6.1e-75 251.6 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase DUF373 PF04123.13 BAJ50157.1 - 4.9e-93 312.2 4.0 6.1e-93 311.9 4.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF373) CnrY PF17524.2 BAJ50157.1 - 0.0067 16.6 0.2 0.94 9.7 0.1 2.3 2 0 0 2 2 2 2 Anti-sigma factor CnrY Polbeta PF18765.1 BAJ50158.1 - 1.9e-15 56.7 0.0 2.6e-15 56.3 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 BAJ50158.1 - 4.5e-06 26.9 0.1 7.1e-06 26.2 0.1 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF86 PF01934.17 BAJ50159.1 - 2e-14 53.5 0.0 2.5e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 AKAP7_RIRII_bdg PF10470.9 BAJ50160.1 - 0.0026 17.8 1.9 0.0049 16.9 1.9 1.4 1 0 0 1 1 1 1 PKA-RI-RII subunit binding domain of A-kinase anchor protein Ribosomal_S19 PF00203.21 BAJ50161.1 - 7.9e-32 109.0 0.1 1.1e-31 108.5 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 RHH_6 PF16762.5 BAJ50162.1 - 0.00016 22.3 0.0 0.00019 22.0 0.0 1.1 1 0 0 1 1 1 1 Ribbon-helix-helix domain Ribosomal_L2_C PF03947.18 BAJ50163.1 - 3.9e-36 124.0 0.6 5.9e-36 123.4 0.6 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 BAJ50163.1 - 3.8e-11 42.8 0.0 1.1e-10 41.3 0.0 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L23 PF00276.20 BAJ50164.1 - 2.2e-15 56.8 7.0 1.1e-14 54.6 7.0 1.8 1 1 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L4 PF00573.22 BAJ50165.1 - 1.9e-40 138.6 0.1 2.2e-40 138.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.22 BAJ50166.1 - 1.1e-70 238.5 0.0 7.7e-48 163.3 0.0 2.0 2 0 0 2 2 2 2 Ribosomal protein L3 ATP-grasp_2 PF08442.10 BAJ50166.1 - 7.2e-07 29.0 0.3 9.4e-07 28.6 0.3 1.1 1 0 0 1 1 1 1 ATP-grasp domain KIP1 PF07765.12 BAJ50167.1 - 0.13 12.4 0.2 4.5 7.5 0.0 2.7 3 0 0 3 3 3 0 KIP1-like protein Asn_synthase PF00733.21 BAJ50168.1 - 1.3e-19 71.1 0.7 2.7e-18 66.8 0.4 2.0 1 1 1 2 2 2 2 Asparagine synthase NAD_synthase PF02540.17 BAJ50168.1 - 0.13 11.3 0.1 0.2 10.7 0.1 1.3 1 0 0 1 1 1 0 NAD synthase HD_3 PF13023.6 BAJ50169.1 - 2e-32 112.4 0.0 2.5e-32 112.1 0.0 1.0 1 0 0 1 1 1 1 HD domain HD_2 PF12917.7 BAJ50169.1 - 4e-14 52.8 0.0 4.7e-14 52.6 0.0 1.1 1 0 0 1 1 1 1 HD containing hydrolase-like enzyme HD PF01966.22 BAJ50169.1 - 6.2e-06 26.4 0.1 9.3e-06 25.9 0.1 1.2 1 0 0 1 1 1 1 HD domain Peptidase_S32 PF05579.13 BAJ50169.1 - 0.062 12.5 0.0 0.076 12.2 0.0 1.1 1 0 0 1 1 1 0 Equine arteritis virus serine endopeptidase S32 DNA_primase_lrg PF04104.14 BAJ50170.1 - 5.3e-26 91.6 0.0 9e-26 90.8 0.0 1.4 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Erythro-docking PF09277.11 BAJ50170.1 - 0.043 13.7 0.2 0.099 12.6 0.2 1.6 1 0 0 1 1 1 0 Erythronolide synthase, docking COG6 PF06419.11 BAJ50170.1 - 0.14 10.4 0.0 0.17 10.1 0.0 1.1 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 PAS_7 PF12860.7 BAJ50170.1 - 0.14 12.3 0.1 1.9 8.7 0.0 2.7 3 1 1 4 4 4 0 PAS fold MFS_1 PF07690.16 BAJ50171.1 - 1.6e-30 106.3 37.8 3.3e-15 55.9 17.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 BAJ50171.1 - 7.8e-07 28.3 11.0 7.8e-07 28.3 11.0 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter Sod_Fe_C PF02777.18 BAJ50172.1 - 5.2e-36 122.9 0.8 7.6e-36 122.4 0.8 1.2 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 BAJ50172.1 - 4.7e-31 107.1 2.1 6.9e-31 106.6 0.4 1.9 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain MFS_1 PF07690.16 BAJ50173.1 - 1.8e-23 83.1 69.1 1.2e-17 63.9 32.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Shisa PF13908.6 BAJ50174.1 - 0.14 12.4 1.1 0.22 11.8 1.1 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator HhH-GPD PF00730.25 BAJ50175.1 - 5e-22 78.4 0.0 7.2e-22 77.9 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 BAJ50175.1 - 1.9e-08 33.7 0.1 4.7e-08 32.5 0.1 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 BAJ50175.1 - 5.1e-05 23.8 0.0 0.069 13.8 0.1 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.9 BAJ50175.1 - 0.028 14.7 3.2 0.058 13.7 3.2 1.5 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III AhpC-TSA PF00578.21 BAJ50176.1 - 7.3e-44 148.7 0.0 8.7e-44 148.4 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 BAJ50176.1 - 6.3e-27 94.1 0.0 7.5e-27 93.8 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 BAJ50176.1 - 4.7e-05 23.5 0.0 6.8e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 BAJ50176.1 - 5.8e-05 22.7 0.0 6.6e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) Thioredoxin_8 PF13905.6 BAJ50176.1 - 6.4e-05 23.2 0.0 9e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like SCO1-SenC PF02630.14 BAJ50176.1 - 0.0022 17.9 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 SCO1/SenC ACT PF01842.25 BAJ50176.1 - 0.0042 16.8 0.2 0.95 9.3 0.0 3.0 3 1 0 3 3 3 1 ACT domain Radical_SAM PF04055.21 BAJ50176.1 - 0.14 12.5 0.0 0.38 11.1 0.0 1.7 1 1 0 1 1 1 0 Radical SAM superfamily Fe-S_biosyn PF01521.20 BAJ50177.1 - 7.5e-21 74.4 0.0 8.4e-21 74.2 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis RNA_pol_A_bac PF01000.26 BAJ50178.1 - 6.3e-24 84.5 0.0 8.9e-24 84.0 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 BAJ50178.1 - 5.1e-11 41.9 0.0 6.8e-11 41.4 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Ribosomal_L27A PF00828.19 BAJ50179.1 - 6.7e-11 43.0 1.3 3.5e-10 40.6 1.3 1.9 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 BAJ50179.1 - 5.1e-09 35.8 0.1 6.4e-09 35.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e RNA_pol_Rpb2_4 PF04566.13 BAJ50179.1 - 0.22 11.8 1.6 0.77 10.1 0.5 2.1 2 0 0 2 2 2 0 RNA polymerase Rpb2, domain 4 Ribosomal_L13 PF00572.18 BAJ50180.1 - 4e-12 46.5 0.3 4.8e-10 39.8 0.2 2.4 1 1 0 1 1 1 1 Ribosomal protein L13 PHB_acc_N PF07879.11 BAJ50180.1 - 0.033 14.3 0.1 0.31 11.2 0.0 2.2 2 0 0 2 2 2 0 PHB/PHA accumulation regulator DNA-binding domain TEA PF01285.18 BAJ50180.1 - 0.077 13.1 1.6 1.2 9.3 0.1 2.4 1 1 1 2 2 2 0 TEA/ATTS domain Ribosomal_S9 PF00380.19 BAJ50181.1 - 3.7e-31 108.1 0.0 4.2e-31 108.0 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 DUF3886 PF13025.6 BAJ50181.1 - 0.18 12.0 1.1 0.29 11.3 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3886) RNA_pol_N PF01194.17 BAJ50182.1 - 4.9e-29 100.4 0.5 6e-29 100.1 0.5 1.1 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.12 BAJ50182.1 - 0.00075 19.7 0.2 0.00094 19.4 0.2 1.2 1 0 0 1 1 1 1 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Enolase_C PF00113.22 BAJ50183.1 - 2.5e-59 200.9 0.0 3.6e-59 200.4 0.0 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 BAJ50183.1 - 1.1e-25 90.3 0.0 1.7e-25 89.7 0.0 1.4 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 BAJ50183.1 - 1.8e-11 44.0 0.0 2.8e-11 43.4 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like Succ_CoA_lig PF13607.6 BAJ50183.1 - 0.021 14.6 0.0 0.043 13.6 0.0 1.4 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain MAAL_C PF07476.11 BAJ50183.1 - 0.11 11.7 0.0 0.17 11.0 0.0 1.3 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Asparaginase_C PF17763.1 BAJ50183.1 - 0.11 12.7 0.1 0.34 11.1 0.0 1.8 2 0 0 2 2 2 0 Glutaminase/Asparaginase C-terminal domain Ribosomal_60s PF00428.19 BAJ50183.1 - 1.8 9.2 5.3 0.59 10.8 0.3 2.6 3 0 0 3 3 3 0 60s Acidic ribosomal protein Ribosomal_S2 PF00318.20 BAJ50184.1 - 1.2e-23 83.5 1.5 3.6e-12 46.0 0.2 2.0 1 1 1 2 2 2 2 Ribosomal protein S2 PYRIN PF02758.16 BAJ50184.1 - 0.13 12.4 0.0 0.32 11.2 0.0 1.8 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain DNA_pol_B PF00136.21 BAJ50185.1 - 3.1e-20 72.3 0.0 3.7e-19 68.8 0.0 2.2 1 1 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 BAJ50185.1 - 1.2e-09 37.8 0.0 2.5e-09 36.7 0.0 1.4 2 0 0 2 2 2 1 DNA polymerase family B, exonuclease domain Bac_luciferase PF00296.20 BAJ50186.1 - 7.8e-60 202.9 0.0 9.8e-58 196.0 0.0 2.0 1 1 0 1 1 1 1 Luciferase-like monooxygenase TMP-TENI PF02581.17 BAJ50186.1 - 0.1 11.9 0.0 0.2 11.0 0.0 1.5 1 0 0 1 1 1 0 Thiamine monophosphate synthase PIN PF01850.21 BAJ50187.1 - 2.4e-08 34.5 0.2 3.3e-08 34.1 0.2 1.2 1 0 0 1 1 1 1 PIN domain RHH_4 PF13467.6 BAJ50188.1 - 0.074 12.9 0.8 0.6 10.0 0.1 2.3 2 1 1 3 3 3 0 Ribbon-helix-helix domain UPF0047 PF01894.17 BAJ50190.1 - 1.7e-36 124.8 0.0 2e-36 124.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF1495 PF07381.11 BAJ50190.1 - 0.11 12.4 0.0 1.4 8.8 0.0 2.3 1 1 2 3 3 3 0 Winged helix DNA-binding domain (DUF1495) DUF4256 PF14066.6 BAJ50191.1 - 3e-73 245.2 0.0 3.3e-73 245.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4256) Methyltransf_11 PF08241.12 BAJ50192.1 - 1.7e-11 44.6 0.0 2.8e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ50192.1 - 6.9e-10 39.5 0.0 1.1e-09 38.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAJ50192.1 - 6.2e-06 26.1 0.0 7.8e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 BAJ50192.1 - 7.8e-05 22.1 0.0 9.1e-05 21.9 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 BAJ50192.1 - 0.0068 16.3 0.0 0.0088 15.9 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_12 PF08242.12 BAJ50192.1 - 0.029 15.1 0.0 0.049 14.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PMT_2 PF13231.6 BAJ50193.1 - 3.5e-14 53.3 9.9 3.5e-14 53.3 9.9 3.0 2 2 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.18 BAJ50193.1 - 2.7e-08 33.7 3.5 0.00063 19.4 4.6 4.3 2 1 2 4 4 4 2 Dolichyl-phosphate-mannose-protein mannosyltransferase ELFV_dehydrog PF00208.21 BAJ50194.1 - 9.3e-26 91.0 0.0 1.5e-25 90.3 0.0 1.3 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 BAJ50194.1 - 5.6e-16 58.6 0.0 9e-16 57.9 0.0 1.3 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Peptidase_M24 PF00557.24 BAJ50195.1 - 1.2e-36 126.4 0.0 1.5e-36 126.1 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF92 PF01940.16 BAJ50196.1 - 9.6e-55 185.6 8.9 1.1e-54 185.3 8.9 1.0 1 0 0 1 1 1 1 Integral membrane protein DUF92 Desulfoferrod_N PF06397.12 BAJ50196.1 - 0.027 14.1 1.4 0.051 13.2 1.4 1.4 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain Kelch_1 PF01344.25 BAJ50196.1 - 0.069 12.7 0.3 0.21 11.2 0.3 1.8 1 0 0 1 1 1 0 Kelch motif Kelch_5 PF13854.6 BAJ50196.1 - 0.58 10.2 5.2 0.29 11.2 1.0 2.7 2 0 0 2 2 2 0 Kelch motif Kelch_6 PF13964.6 BAJ50196.1 - 2.3 8.6 4.6 0.64 10.4 0.2 2.4 3 1 0 3 3 3 0 Kelch motif DUF2976 PF11190.8 BAJ50196.1 - 2.4 8.0 5.9 0.91 9.4 0.2 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2976) tRNA-synt_His PF13393.6 BAJ50197.1 - 3.9e-69 233.3 0.0 4.4e-69 233.1 0.0 1.0 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 BAJ50197.1 - 1.6e-11 44.5 0.0 2.6e-11 43.8 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.20 BAJ50197.1 - 0.00017 21.2 0.0 0.00028 20.4 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 BAJ50197.1 - 0.00062 18.9 0.1 0.39 9.7 0.0 2.4 2 1 0 2 2 2 2 tRNA synthetases class II (D, K and N) Trypsin_2 PF13365.6 BAJ50198.1 - 4.4e-36 125.0 0.9 9.4e-36 124.0 0.9 1.6 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 BAJ50198.1 - 3.2e-15 56.2 1.9 3.3e-13 49.7 1.9 2.7 1 1 0 1 1 1 1 PDZ domain Trypsin PF00089.26 BAJ50198.1 - 9.4e-15 55.0 0.2 3.1e-14 53.3 0.2 1.8 1 1 0 1 1 1 1 Trypsin PDZ PF00595.24 BAJ50198.1 - 1.8e-09 37.8 2.8 0.00032 21.0 0.4 2.9 1 1 1 2 2 2 2 PDZ domain PDZ_6 PF17820.1 BAJ50198.1 - 9.3e-08 31.8 11.8 0.00034 20.4 1.1 3.6 3 1 1 4 4 4 2 PDZ domain Peptidase_S46 PF10459.9 BAJ50198.1 - 0.032 12.9 1.5 0.036 12.7 0.3 1.5 2 0 0 2 2 2 0 Peptidase S46 Tricorn_PDZ PF14685.6 BAJ50198.1 - 0.043 13.8 1.2 0.15 12.1 0.5 2.2 1 1 1 2 2 2 0 Tricorn protease PDZ domain FAA_hydrolase PF01557.18 BAJ50199.1 - 3.4e-64 216.5 0.0 4.2e-64 216.2 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF4751 PF15942.5 BAJ50199.1 - 0.15 12.0 0.0 0.32 10.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4751) Aldedh PF00171.22 BAJ50200.1 - 1.1e-136 456.0 0.0 1.3e-136 455.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family tRNA_synthFbeta PF17759.1 BAJ50201.1 - 2.8e-41 141.3 0.0 7.4e-41 139.9 0.0 1.7 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 BAJ50201.1 - 2.6e-22 78.9 0.2 4.7e-15 55.6 0.1 2.6 2 0 0 2 2 2 2 tRNA synthetase B5 domain B3_4 PF03483.17 BAJ50201.1 - 2.7e-08 33.7 0.0 4.9e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 B3/4 domain PhetRS_B1 PF18262.1 BAJ50201.1 - 3.7e-05 23.9 0.0 0.00067 19.8 0.0 2.7 1 1 0 1 1 1 1 Phe-tRNA synthetase beta subunit B1 domain HTH_33 PF13592.6 BAJ50201.1 - 0.0022 17.6 0.1 0.04 13.6 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn helix HTH_18 PF12833.7 BAJ50201.1 - 0.15 12.4 0.0 1.6 9.1 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain tRNA-synt_2d PF01409.20 BAJ50202.1 - 6.3e-90 300.9 0.0 9e-90 300.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 BAJ50202.1 - 2.3e-06 26.9 0.0 0.013 14.6 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class II (D, K and N) tRNA_synthFbeta PF17759.1 BAJ50202.1 - 4.3e-06 26.3 0.1 0.00043 19.8 0.0 2.7 3 0 0 3 3 3 1 Phenylalanyl tRNA synthetase beta chain CLM domain PheRS_DBD3 PF18553.1 BAJ50202.1 - 0.0042 17.3 0.2 0.011 15.9 0.0 1.9 2 0 0 2 2 2 1 PheRS DNA binding domain 3 RepC PF06504.11 BAJ50202.1 - 0.018 14.3 0.0 0.04 13.1 0.0 1.5 1 1 0 1 1 1 0 Replication protein C (RepC) tRNA-synt_2b PF00587.25 BAJ50202.1 - 0.031 14.2 0.2 0.07 13.1 0.1 1.6 2 0 0 2 2 2 0 tRNA synthetase class II core domain (G, H, P, S and T) DUF4364 PF14277.6 BAJ50202.1 - 0.26 11.0 0.0 1.7 8.3 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4364) AbiEi_4 PF13338.6 BAJ50202.1 - 1 9.6 4.1 1.9 8.7 1.6 2.9 3 0 0 3 3 3 0 Transcriptional regulator, AbiEi antitoxin DUF996 PF06195.13 BAJ50203.1 - 0.0095 16.2 20.6 0.094 13.0 2.7 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF996) SIS PF01380.22 BAJ50204.1 - 2e-09 37.4 0.0 5.6e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 BAJ50204.1 - 0.00042 20.3 0.1 0.0021 18.1 0.0 2.2 2 0 0 2 2 2 1 SIS domain TssD PF17642.1 BAJ50204.1 - 0.19 11.6 0.0 0.64 9.8 0.0 1.8 2 0 0 2 2 2 0 Hemolysin coregulated protein Hcp (TssD) Bac_luciferase PF00296.20 BAJ50205.1 - 5e-58 197.0 0.1 6.1e-58 196.7 0.1 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Cyclase PF04199.13 BAJ50206.1 - 9.5e-26 90.7 0.0 1.2e-25 90.4 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase UbiA PF01040.18 BAJ50207.1 - 1e-39 136.3 16.5 1.4e-39 135.9 16.5 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family tRNA_int_endo PF01974.17 BAJ50208.1 - 1.5e-12 47.4 0.3 3.2e-12 46.3 0.3 1.5 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 BAJ50208.1 - 2.3e-07 30.4 2.6 3.4e-07 29.8 0.6 2.2 3 0 0 3 3 3 1 tRNA intron endonuclease, N-terminal domain HU-HIG PF18291.1 BAJ50208.1 - 0.076 13.1 0.2 0.52 10.4 0.0 2.0 2 0 0 2 2 2 0 HU domain fused to wHTH, Ig, or Glycine-rich motif NdhN PF11909.8 BAJ50208.1 - 0.12 12.1 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 NADH-quinone oxidoreductase cyanobacterial subunit N tRNA_int_end_N2 PF12928.7 BAJ50208.1 - 0.21 11.8 0.8 0.37 11.0 0.1 1.8 2 0 0 2 2 2 0 tRNA-splicing endonuclease subunit sen54 N-term OppC_N PF12911.7 BAJ50209.1 - 0.0038 17.2 0.2 0.009 16.0 0.2 1.6 1 0 0 1 1 1 1 N-terminal TM domain of oligopeptide transport permease C DUF2012 PF09430.10 BAJ50209.1 - 0.075 13.1 0.2 0.13 12.4 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2012) DUF4129 PF13559.6 BAJ50210.1 - 0.0052 17.0 0.1 0.011 15.9 0.0 1.6 1 1 1 2 2 2 1 Domain of unknown function (DUF4129) PqiA PF04403.13 BAJ50210.1 - 0.038 13.8 0.4 0.062 13.1 0.4 1.3 1 0 0 1 1 1 0 Paraquat-inducible protein A Peptidase_S49_N PF08496.10 BAJ50210.1 - 0.069 13.2 0.3 0.089 12.9 0.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal HTH_56 PF18662.1 BAJ50210.1 - 0.073 13.1 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 Cch helix turn helix domain Acetyltransf_19 PF18015.1 BAJ50210.1 - 0.076 13.2 0.0 0.17 12.1 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain CYTL1 PF15153.6 BAJ50210.1 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Cytokine-like protein 1 DUF3015 PF11220.8 BAJ50211.1 - 0.022 14.6 0.0 0.025 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3015) Gram_pos_anchor PF00746.21 BAJ50211.1 - 0.056 13.4 0.2 0.083 12.8 0.2 1.2 1 0 0 1 1 1 0 LPXTG cell wall anchor motif HycH PF07450.11 BAJ50211.1 - 0.1 13.0 0.1 0.14 12.6 0.1 1.2 1 0 0 1 1 1 0 Formate hydrogenlyase maturation protein HycH AAA_3 PF07726.11 BAJ50212.1 - 4.5e-62 207.7 0.0 7.5e-62 207.0 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 BAJ50212.1 - 4.6e-19 68.0 0.3 9.8e-19 67.0 0.1 1.7 1 1 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 BAJ50212.1 - 1.3e-16 60.8 0.0 2.9e-16 59.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 BAJ50212.1 - 5.5e-06 26.8 0.0 1.6e-05 25.3 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 BAJ50212.1 - 1.8e-05 24.0 0.0 3e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 BAJ50212.1 - 3.3e-05 23.4 1.0 0.0065 15.9 0.2 2.2 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 BAJ50212.1 - 0.00011 22.0 0.0 0.00099 18.9 0.0 2.2 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 BAJ50212.1 - 0.0003 20.6 0.0 0.0045 16.7 0.0 2.1 2 0 0 2 2 2 1 Sigma-54 interaction domain DUF58 PF01882.18 BAJ50213.1 - 4.4e-11 42.9 0.0 9.6e-11 41.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function DUF58 CE2_N PF17996.1 BAJ50215.1 - 0.16 11.9 0.0 6.3 6.8 0.0 2.7 3 0 0 3 3 3 0 Carbohydrate esterase 2 N-terminal FBPase_3 PF01950.16 BAJ50216.1 - 9e-172 571.2 0.0 1e-171 571.0 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase CBFD_NFYB_HMF PF00808.23 BAJ50217.1 - 0.00023 21.4 0.0 0.00031 21.0 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 BAJ50217.1 - 0.052 13.9 0.0 0.068 13.5 0.0 1.2 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 CENP-X PF09415.10 BAJ50217.1 - 0.14 12.5 0.5 0.49 10.7 0.0 1.7 1 1 1 2 2 2 0 CENP-S associating Centromere protein X ABM PF03992.16 BAJ50218.1 - 8.7e-06 25.8 0.0 1.1e-05 25.5 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF4937 PF16291.5 BAJ50218.1 - 0.012 15.8 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4937 DUF4188 PF13826.6 BAJ50218.1 - 0.073 13.4 0.0 0.092 13.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4188) DUF72 PF01904.18 BAJ50220.1 - 8.6e-35 120.8 1.2 1.1e-34 120.5 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 E1_dh PF00676.20 BAJ50221.1 - 2e-83 279.8 0.0 2.3e-83 279.6 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 BAJ50221.1 - 9.5e-07 28.7 0.3 4.7e-06 26.5 0.3 1.9 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 BAJ50221.1 - 1.1e-05 24.8 0.0 0.00028 20.2 0.0 2.1 1 1 1 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase Transketolase_N PF00456.21 BAJ50221.1 - 3.9e-05 22.8 0.0 5.6e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain SpoIIM PF01944.17 BAJ50222.1 - 6.3e-07 29.5 16.7 1.1e-06 28.8 16.7 1.3 1 1 0 1 1 1 1 Stage II sporulation protein M Peptidase_A24 PF01478.18 BAJ50223.1 - 2.1e-07 31.3 7.9 2.1e-07 31.3 7.9 1.8 2 0 0 2 2 2 1 Type IV leader peptidase family Arc_PepC_II PF06847.11 BAJ50223.1 - 2.7e-07 31.0 2.1 2.3e-06 28.0 0.3 2.9 2 1 0 2 2 2 1 Archaeal Peptidase A24 C-terminus Type II TRIQK PF15168.6 BAJ50223.1 - 0.076 12.9 0.2 2.1 8.3 0.1 2.4 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family DPM3 PF08285.11 BAJ50223.1 - 4.9 7.4 5.7 1.5 9.0 0.3 2.5 2 1 1 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) ELFV_dehydrog PF00208.21 BAJ50224.1 - 1.5e-73 247.5 0.1 2.8e-73 246.6 0.1 1.4 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 BAJ50224.1 - 1.2e-57 193.4 0.0 1.9e-57 192.7 0.0 1.3 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 BAJ50224.1 - 0.0026 17.1 0.0 0.0052 16.2 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thi4 PF01946.17 BAJ50224.1 - 0.051 12.8 0.1 0.42 9.8 0.0 2.0 2 0 0 2 2 2 0 Thi4 family Gp_dh_N PF00044.24 BAJ50224.1 - 0.091 13.1 0.0 0.24 11.7 0.0 1.8 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Bac_GDH PF05088.12 BAJ50224.1 - 0.14 9.6 0.0 0.2 9.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase NAD_binding_7 PF13241.6 BAJ50224.1 - 0.16 12.4 0.0 0.37 11.3 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding Pribosyltran PF00156.27 BAJ50225.1 - 2.6e-25 88.8 0.0 5e-25 87.9 0.0 1.4 2 0 0 2 2 2 1 Phosphoribosyl transferase domain UPRTase PF14681.6 BAJ50225.1 - 7.3e-06 25.6 0.0 1e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 BAJ50225.1 - 0.09 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase Radical_SAM PF04055.21 BAJ50226.1 - 4.6e-23 82.4 0.0 1.3e-22 81.0 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 BAJ50226.1 - 5.5e-21 74.4 0.0 9.5e-21 73.7 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 BAJ50226.1 - 3.7e-08 33.2 0.1 8.4e-08 32.1 0.1 1.6 1 0 0 1 1 1 1 TRAM domain Copper-bind PF00127.20 BAJ50227.1 - 3.4e-06 27.4 0.2 3.8e-05 24.1 0.2 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 BAJ50227.1 - 0.00033 20.7 0.0 0.00049 20.2 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain F420_oxidored PF03807.17 BAJ50228.1 - 1.1e-13 51.6 1.0 3.4e-13 50.0 0.5 1.9 1 1 1 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 BAJ50228.1 - 5.5e-05 22.9 0.1 7.4e-05 22.4 0.1 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 BAJ50228.1 - 0.00026 21.0 0.4 0.0011 18.9 0.4 1.9 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 BAJ50228.1 - 0.00034 20.8 0.1 0.00057 20.1 0.1 1.4 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase adh_short PF00106.25 BAJ50228.1 - 0.00046 19.7 2.9 0.00075 19.0 0.9 2.0 2 0 0 2 2 2 1 short chain dehydrogenase 3HCDH_N PF02737.18 BAJ50228.1 - 0.00087 19.2 1.1 0.0012 18.7 0.4 1.6 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 BAJ50228.1 - 0.0014 18.3 0.1 0.0026 17.4 0.1 1.4 1 1 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain PDH PF02153.17 BAJ50228.1 - 0.013 14.5 0.3 0.023 13.7 0.2 1.4 1 1 0 1 1 1 0 Prephenate dehydrogenase Semialdhyde_dh PF01118.24 BAJ50228.1 - 0.04 14.4 1.0 0.12 12.8 0.2 2.0 1 1 1 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain KR PF08659.10 BAJ50228.1 - 0.043 13.7 1.2 0.052 13.5 0.3 1.5 2 0 0 2 2 2 0 KR domain NmrA PF05368.13 BAJ50228.1 - 0.07 12.7 2.6 0.046 13.3 0.9 1.5 2 0 0 2 2 2 0 NmrA-like family Epimerase PF01370.21 BAJ50228.1 - 0.14 11.6 0.1 0.25 10.8 0.1 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Rossmann-like PF10727.9 BAJ50228.1 - 0.17 11.7 1.7 0.26 11.1 1.4 1.5 1 1 0 1 1 1 0 Rossmann-like domain PGM_PMM_I PF02878.16 BAJ50229.1 - 1.8e-33 115.2 0.0 3.9e-33 114.1 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 BAJ50229.1 - 2.8e-22 79.1 0.1 5.2e-22 78.2 0.1 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 BAJ50229.1 - 1.9e-21 76.6 0.0 6.7e-21 74.9 0.0 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 BAJ50229.1 - 2.7e-07 30.7 0.0 1.1e-06 28.7 0.0 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain SNARE_assoc PF09335.11 BAJ50230.1 - 1.2e-15 58.0 1.3 1.2e-15 58.0 1.3 2.7 3 0 0 3 3 3 1 SNARE associated Golgi protein ArsP_2 PF11449.8 BAJ50230.1 - 0.19 10.9 2.7 6.4 5.9 0.2 2.1 2 0 0 2 2 2 0 Putative, 10TM heavy-metal exporter DUF1056 PF06341.11 BAJ50230.1 - 2 8.8 6.5 0.62 10.4 1.2 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1056) Pesticin PF16754.5 BAJ50231.1 - 0.061 13.3 0.0 0.069 13.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial toxin homologue of phage lysozyme, C-term zf-C4H2 PF10146.9 BAJ50232.1 - 2.8e-05 24.5 0.4 2.8e-05 24.5 0.4 1.0 1 0 0 1 1 1 1 Zinc finger-containing protein UPF0547 PF10571.9 BAJ50232.1 - 0.00029 20.9 2.4 0.00048 20.1 2.4 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 BAJ50232.1 - 0.00091 18.6 2.9 0.0013 18.1 2.9 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 BAJ50232.1 - 0.0019 18.2 0.5 0.0024 17.9 0.5 1.1 1 0 0 1 1 1 1 Double zinc ribbon zf-RING_4 PF14570.6 BAJ50232.1 - 0.0026 17.5 3.4 0.0036 17.1 3.4 1.1 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zinc_ribbon_2 PF13240.6 BAJ50232.1 - 0.0026 17.4 1.8 0.0036 17.0 1.8 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 BAJ50232.1 - 0.032 15.0 0.1 0.038 14.8 0.1 1.1 1 0 0 1 1 1 0 zinc-ribbon family DUF4044 PF13253.6 BAJ50232.1 - 0.066 12.7 0.6 1.7 8.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4044) DUF952 PF06108.12 BAJ50232.1 - 0.15 12.1 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF952) HypA PF01155.19 BAJ50232.1 - 0.16 12.0 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Pex24p PF06398.11 BAJ50232.1 - 9.3 5.1 6.0 11 4.9 6.0 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Gram_pos_anchor PF00746.21 BAJ50232.1 - 9.7 6.2 8.0 3.2 7.8 0.2 2.1 2 0 0 2 2 2 0 LPXTG cell wall anchor motif HAD_2 PF13419.6 BAJ50233.1 - 2.7e-31 109.0 1.6 2.8e-31 109.0 0.2 1.8 2 0 0 2 2 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 BAJ50233.1 - 2e-22 80.5 1.0 2.5e-21 77.0 0.4 2.9 2 1 0 2 2 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 BAJ50233.1 - 4e-11 43.7 0.0 9.7e-11 42.4 0.0 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 BAJ50233.1 - 6.6e-11 42.1 0.0 4.6e-10 39.4 0.0 2.4 2 0 0 2 2 2 1 HAD-hyrolase-like T2SSE PF00437.20 BAJ50233.1 - 8.5e-11 41.4 0.0 2.2e-10 40.0 0.0 1.7 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.29 BAJ50233.1 - 5.5e-05 22.9 0.9 0.00013 21.7 0.1 2.1 2 0 0 2 2 1 1 KH domain AAA_33 PF13671.6 BAJ50233.1 - 7.3e-05 23.0 0.0 0.046 13.9 0.0 3.2 2 1 1 3 3 3 1 AAA domain NIF PF03031.18 BAJ50233.1 - 8.7e-05 22.3 0.2 0.0013 18.5 0.2 2.3 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase Put_Phosphatase PF06888.12 BAJ50233.1 - 0.0003 20.3 0.0 0.018 14.4 0.1 2.4 2 0 0 2 2 2 1 Putative Phosphatase Hydrolase_3 PF08282.12 BAJ50233.1 - 0.00033 20.5 0.1 4.7 6.9 0.0 3.5 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase AAA_18 PF13238.6 BAJ50233.1 - 0.00067 20.2 0.0 0.0038 17.8 0.0 2.4 2 0 0 2 2 1 1 AAA domain ATP_bind_1 PF03029.17 BAJ50233.1 - 0.00086 19.2 2.2 0.028 14.2 0.0 2.7 3 0 0 3 3 2 1 Conserved hypothetical ATP binding protein KH_4 PF13083.6 BAJ50233.1 - 0.00093 19.0 0.3 0.0047 16.8 0.3 2.2 2 0 0 2 2 1 1 KH domain AAA_22 PF13401.6 BAJ50233.1 - 0.00095 19.4 0.3 0.086 13.1 0.0 2.9 3 0 0 3 3 2 1 AAA domain PIN_4 PF13638.6 BAJ50233.1 - 0.0011 19.2 1.0 0.11 12.8 0.0 3.0 2 1 0 2 2 2 1 PIN domain AAA_16 PF13191.6 BAJ50233.1 - 0.0012 19.2 0.2 0.0069 16.8 0.0 2.4 3 0 0 3 3 1 1 AAA ATPase domain AAA PF00004.29 BAJ50233.1 - 0.0017 18.8 0.6 0.24 11.8 0.0 3.3 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 BAJ50233.1 - 0.0019 17.8 0.0 0.012 15.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain Acid_phosphat_B PF03767.14 BAJ50233.1 - 0.0022 17.6 0.0 0.0046 16.6 0.0 1.4 1 0 0 1 1 1 1 HAD superfamily, subfamily IIIB (Acid phosphatase) KH_2 PF07650.17 BAJ50233.1 - 0.0037 17.1 1.5 0.016 15.1 1.5 2.1 1 0 0 1 1 1 1 KH domain Hydrolase_6 PF13344.6 BAJ50233.1 - 0.0044 17.1 0.0 0.047 13.8 0.0 2.8 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase ABC_tran PF00005.27 BAJ50233.1 - 0.0052 17.3 0.1 0.034 14.6 0.0 2.3 2 0 0 2 2 2 1 ABC transporter SRP54 PF00448.22 BAJ50233.1 - 0.011 15.3 0.0 0.31 10.6 0.0 2.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain IstB_IS21 PF01695.17 BAJ50233.1 - 0.013 15.2 0.0 0.031 14.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein Thymidylate_kin PF02223.17 BAJ50233.1 - 0.015 15.0 0.3 0.089 12.5 0.0 2.4 3 0 0 3 3 2 0 Thymidylate kinase ADH_zinc_N PF00107.26 BAJ50233.1 - 0.017 15.1 0.2 2.8 7.9 0.1 2.5 2 0 0 2 2 2 0 Zinc-binding dehydrogenase AAA_30 PF13604.6 BAJ50233.1 - 0.018 14.8 0.2 0.23 11.2 0.0 2.7 3 0 0 3 3 2 0 AAA domain AAA_5 PF07728.14 BAJ50233.1 - 0.019 15.0 0.0 0.061 13.3 0.0 1.9 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) PPV_E1_C PF00519.17 BAJ50233.1 - 0.021 13.7 0.0 0.034 13.0 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase AAA_29 PF13555.6 BAJ50233.1 - 0.022 14.5 0.0 0.056 13.2 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 BAJ50233.1 - 0.027 14.2 0.1 0.091 12.5 0.1 1.9 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 BAJ50233.1 - 0.034 14.3 0.0 0.13 12.3 0.0 2.0 1 0 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 BAJ50233.1 - 0.06 12.6 0.1 0.39 10.0 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin Peptidase_S8_N PF16361.5 BAJ50233.1 - 0.066 13.7 1.0 0.12 12.8 0.1 1.9 2 0 0 2 2 1 0 N-terminal of Subtilase family AAA_17 PF13207.6 BAJ50233.1 - 0.072 13.5 0.4 0.47 10.9 0.0 2.7 2 0 0 2 2 1 0 AAA domain AAA_28 PF13521.6 BAJ50233.1 - 0.082 13.1 1.0 1.1 9.5 0.0 2.9 3 0 0 3 3 2 0 AAA domain NACHT PF05729.12 BAJ50233.1 - 0.086 12.7 0.5 0.32 10.9 0.0 2.3 3 0 0 3 3 1 0 NACHT domain PG_binding_2 PF08823.11 BAJ50233.1 - 0.093 13.1 0.2 0.58 10.5 0.1 2.2 2 0 0 2 2 2 0 Putative peptidoglycan binding domain DUF1827 PF08860.10 BAJ50233.1 - 0.096 12.9 1.5 1.2 9.4 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1827) PIN PF01850.21 BAJ50233.1 - 0.11 13.1 0.8 0.28 11.7 0.1 2.2 2 0 0 2 2 1 0 PIN domain DUF705 PF05152.12 BAJ50233.1 - 0.11 11.9 0.0 0.56 9.6 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF705) RNA_helicase PF00910.22 BAJ50233.1 - 0.15 12.4 0.0 0.43 11.0 0.0 1.8 1 0 0 1 1 1 0 RNA helicase CbiA PF01656.23 BAJ50233.1 - 0.16 12.1 0.0 2.3 8.3 0.0 2.5 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain LAGLIDADG_WhiA PF14527.6 BAJ50233.1 - 0.22 11.6 0.7 27 4.9 0.1 2.9 2 0 0 2 2 2 0 WhiA LAGLIDADG-like domain Mg_chelatase PF01078.21 BAJ50233.1 - 0.22 10.8 1.4 0.47 9.8 0.0 2.0 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Thiolase_N PF00108.23 BAJ50234.1 - 1.6e-27 96.5 0.0 5.2e-27 94.8 0.0 1.8 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 BAJ50234.1 - 6.5e-11 42.0 0.1 2.4e-08 33.7 0.0 2.9 2 0 0 2 2 2 2 Thiolase, C-terminal domain ACP_syn_III PF08545.10 BAJ50234.1 - 8.7e-06 25.5 1.2 0.00062 19.6 0.2 2.4 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ketoacyl-synt PF00109.26 BAJ50234.1 - 0.00013 21.7 14.4 0.00014 21.6 5.3 3.6 4 1 1 5 5 5 2 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 BAJ50234.1 - 0.0039 17.2 0.4 3 7.9 0.0 3.2 3 1 0 3 3 3 2 Beta-ketoacyl synthase, C-terminal domain OB_aCoA_assoc PF01796.17 BAJ50235.1 - 3.4e-16 59.0 0.0 5.3e-16 58.4 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 BAJ50235.1 - 5.9e-08 32.4 0.1 1.2e-07 31.5 0.1 1.5 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Putative_PNPOx PF01243.20 BAJ50236.1 - 6.5e-19 67.9 0.1 8.2e-19 67.6 0.1 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 BAJ50236.1 - 8.8e-12 45.2 0.0 1.1e-11 44.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 BAJ50236.1 - 7e-06 25.7 0.0 8.7e-06 25.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like HlyD_2 PF12700.7 BAJ50236.1 - 0.02 13.7 0.0 0.023 13.5 0.0 1.0 1 0 0 1 1 1 0 HlyD family secretion protein Amidohydro_1 PF01979.20 BAJ50237.1 - 7.7e-69 232.6 0.0 9.2e-69 232.4 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 BAJ50237.1 - 6.8e-21 75.3 0.5 5e-15 55.9 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 BAJ50237.1 - 0.00051 19.5 0.0 0.001 18.5 0.0 1.4 1 0 0 1 1 1 1 Adenosine/AMP deaminase Bac_luciferase PF00296.20 BAJ50238.1 - 3.2e-56 191.1 0.4 3.8e-56 190.8 0.4 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Amidohydro_1 PF01979.20 BAJ50239.1 - 1.3e-49 169.4 0.0 1.5e-49 169.1 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 BAJ50239.1 - 5.8e-20 72.2 1.7 2.9e-16 60.0 0.1 2.4 2 1 0 2 2 2 2 Amidohydrolase family Ald_Xan_dh_C2 PF02738.18 BAJ50240.1 - 1.6e-138 462.6 0.0 1.9e-138 462.4 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50240.1 - 1.4e-18 67.3 0.0 3.6e-18 65.9 0.0 1.8 2 0 0 2 2 2 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Peptidase_Prp PF04327.12 BAJ50240.1 - 0.14 12.4 0.0 1.8 8.9 0.0 2.3 2 0 0 2 2 2 0 Cysteine protease Prp MASE1 PF05231.14 BAJ50241.1 - 0.00015 21.0 26.0 0.00068 18.9 26.2 1.7 1 1 0 1 1 1 1 MASE1 FAM70 PF14967.6 BAJ50241.1 - 0.15 11.5 0.6 0.27 10.7 0.6 1.4 1 0 0 1 1 1 0 FAM70 protein CbiQ PF02361.16 BAJ50242.1 - 3.9e-25 88.8 13.5 3.9e-25 88.8 13.5 1.6 2 0 0 2 2 2 1 Cobalt transport protein GET2 PF08690.10 BAJ50242.1 - 0.63 9.7 2.2 1.2 8.8 2.2 1.4 1 0 0 1 1 1 0 GET complex subunit GET2 Amidohydro_3 PF07969.11 BAJ50243.1 - 1.1e-07 31.8 0.3 0.00021 20.9 0.1 2.3 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 BAJ50243.1 - 1.9e-06 27.5 0.2 0.0038 16.6 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family ABC_tran PF00005.27 BAJ50244.1 - 7.7e-28 97.7 0.0 1.3e-27 97.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50244.1 - 1.4e-08 34.9 0.4 0.0012 18.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 BAJ50244.1 - 7.2e-05 22.7 0.1 0.001 18.9 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 BAJ50244.1 - 0.00017 21.9 0.2 0.0043 17.3 0.2 2.4 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 BAJ50244.1 - 0.00058 19.4 0.2 0.0065 15.9 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 BAJ50244.1 - 0.00074 19.2 0.1 0.0013 18.4 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 BAJ50244.1 - 0.00083 19.1 0.0 0.0022 17.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 BAJ50244.1 - 0.0021 17.5 0.0 0.0035 16.7 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 BAJ50244.1 - 0.0031 17.5 0.1 0.044 13.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 BAJ50244.1 - 0.0034 17.3 0.2 0.045 13.6 0.0 2.2 2 0 0 2 2 2 1 NTPase AAA_16 PF13191.6 BAJ50244.1 - 0.0041 17.5 0.1 0.0083 16.5 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain ATP-synt_ab PF00006.25 BAJ50244.1 - 0.0045 16.7 0.0 0.0092 15.7 0.0 1.6 1 1 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain NACHT PF05729.12 BAJ50244.1 - 0.0056 16.6 0.1 0.015 15.2 0.1 1.7 1 0 0 1 1 1 1 NACHT domain AAA_13 PF13166.6 BAJ50244.1 - 0.006 15.3 0.0 0.19 10.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 BAJ50244.1 - 0.0063 17.0 0.1 0.011 16.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 BAJ50244.1 - 0.0097 15.6 0.2 0.2 11.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 BAJ50244.1 - 0.011 15.9 0.3 0.024 14.8 0.3 1.8 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 BAJ50244.1 - 0.011 14.9 0.7 0.024 13.8 0.7 1.8 1 1 0 1 1 1 0 NB-ARC domain ATPase PF06745.13 BAJ50244.1 - 0.012 15.0 0.4 0.52 9.6 0.0 2.2 2 0 0 2 2 2 0 KaiC AAA PF00004.29 BAJ50244.1 - 0.012 16.0 0.1 0.04 14.4 0.1 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 BAJ50244.1 - 0.016 15.7 0.1 0.11 13.0 0.0 2.2 2 1 0 2 2 2 0 AAA domain SRP54 PF00448.22 BAJ50244.1 - 0.02 14.5 0.0 0.053 13.1 0.0 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_25 PF13481.6 BAJ50244.1 - 0.023 14.3 0.0 0.054 13.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain RecA PF00154.21 BAJ50244.1 - 0.025 14.1 0.1 0.26 10.7 0.1 2.1 2 0 0 2 2 2 0 recA bacterial DNA recombination protein PduV-EutP PF10662.9 BAJ50244.1 - 0.048 13.4 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ATPase_2 PF01637.18 BAJ50244.1 - 0.051 13.5 0.1 0.42 10.5 0.0 2.1 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 BAJ50244.1 - 0.058 13.1 0.2 0.63 9.8 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein G-alpha PF00503.20 BAJ50244.1 - 0.065 12.4 0.0 0.15 11.2 0.0 1.7 1 1 0 1 1 1 0 G-protein alpha subunit Pox_A32 PF04665.12 BAJ50244.1 - 0.076 12.5 0.2 11 5.4 0.0 2.2 2 0 0 2 2 2 0 Poxvirus A32 protein RsgA_GTPase PF03193.16 BAJ50244.1 - 0.09 12.7 0.1 0.21 11.5 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 BAJ50244.1 - 0.092 12.7 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE KTI12 PF08433.10 BAJ50244.1 - 0.14 11.6 0.0 0.34 10.3 0.0 1.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_28 PF13521.6 BAJ50244.1 - 0.21 11.8 0.5 1.3 9.2 0.1 2.3 2 1 1 3 3 3 0 AAA domain AAA_19 PF13245.6 BAJ50244.1 - 0.22 11.9 1.2 0.93 9.8 1.0 2.1 1 1 1 2 2 2 0 AAA domain ABC_tran PF00005.27 BAJ50245.1 - 3.7e-28 98.7 0.0 5.1e-28 98.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50245.1 - 8.9e-08 32.3 0.1 0.00084 19.2 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ50245.1 - 4.7e-07 29.5 0.0 1e-06 28.3 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAJ50245.1 - 0.0001 22.6 0.3 0.001 19.3 0.2 2.5 2 1 0 2 2 2 1 AAA domain AAA_23 PF13476.6 BAJ50245.1 - 0.00013 22.6 0.1 0.00026 21.6 0.1 1.6 1 1 0 1 1 1 1 AAA domain T2SSE PF00437.20 BAJ50245.1 - 0.00023 20.3 0.0 0.00075 18.6 0.0 1.8 2 1 1 3 3 3 1 Type II/IV secretion system protein AAA_16 PF13191.6 BAJ50245.1 - 0.00055 20.4 0.0 0.00098 19.5 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.17 BAJ50245.1 - 0.00059 19.6 0.2 0.021 14.6 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_25 PF13481.6 BAJ50245.1 - 0.0011 18.5 0.9 0.0028 17.3 0.1 1.9 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 BAJ50245.1 - 0.0022 17.7 0.0 0.0043 16.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain NTPase_1 PF03266.15 BAJ50245.1 - 0.0095 15.9 1.7 0.053 13.4 0.2 2.1 2 0 0 2 2 2 1 NTPase AAA PF00004.29 BAJ50245.1 - 0.012 16.0 1.3 0.16 12.4 1.4 2.5 1 1 1 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 BAJ50245.1 - 0.013 16.1 0.1 0.041 14.4 0.1 1.9 2 0 0 2 2 1 0 AAA domain Peripla_BP_4 PF13407.6 BAJ50245.1 - 0.013 15.1 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 Periplasmic binding protein domain PhoH PF02562.16 BAJ50245.1 - 0.018 14.5 0.0 0.037 13.5 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein RsgA_GTPase PF03193.16 BAJ50245.1 - 0.02 14.8 0.0 0.07 13.0 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase AAA_28 PF13521.6 BAJ50245.1 - 0.031 14.5 0.2 0.074 13.3 0.2 1.6 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 BAJ50245.1 - 0.05 13.2 0.5 0.16 11.6 0.1 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 BAJ50245.1 - 0.05 13.3 1.7 0.27 10.9 1.7 2.0 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 BAJ50245.1 - 0.061 12.1 0.1 7.7 5.2 0.0 2.3 2 1 0 2 2 2 0 Predicted ATPase of the ABC class ATPase PF06745.13 BAJ50245.1 - 0.081 12.3 0.5 0.65 9.3 0.1 2.2 2 1 0 2 2 2 0 KaiC TniB PF05621.11 BAJ50245.1 - 0.084 12.3 0.1 2.5 7.5 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein ATPase_2 PF01637.18 BAJ50245.1 - 0.085 12.8 0.0 0.14 12.0 0.0 1.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TsaE PF02367.17 BAJ50245.1 - 0.11 12.5 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_27 PF13514.6 BAJ50245.1 - 0.12 12.0 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 BAJ50245.1 - 0.12 12.1 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Cytidylate kinase PduV-EutP PF10662.9 BAJ50245.1 - 0.13 12.0 0.1 0.32 10.7 0.0 1.6 2 0 0 2 2 1 0 Ethanolamine utilisation - propanediol utilisation SRP54 PF00448.22 BAJ50245.1 - 0.14 11.8 0.3 0.52 9.9 0.1 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain RNA_helicase PF00910.22 BAJ50245.1 - 0.14 12.6 0.0 0.27 11.6 0.0 1.6 1 0 0 1 1 1 0 RNA helicase DnaB_C PF03796.15 BAJ50245.1 - 0.14 11.4 0.1 0.42 9.9 0.0 1.7 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain AAA_14 PF13173.6 BAJ50245.1 - 0.16 12.0 0.1 0.61 10.1 0.1 2.0 1 1 0 2 2 2 0 AAA domain DEAD PF00270.29 BAJ50245.1 - 0.16 11.7 0.1 0.32 10.8 0.1 1.6 1 1 0 1 1 1 0 DEAD/DEAH box helicase AAA_24 PF13479.6 BAJ50245.1 - 0.17 11.6 0.5 0.57 9.9 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_11 PF13086.6 BAJ50245.1 - 0.19 11.5 0.0 0.35 10.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain UbiD PF01977.16 BAJ50246.1 - 8.9e-111 370.6 0.1 1e-110 370.4 0.1 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Bac_luciferase PF00296.20 BAJ50247.1 - 1.2e-51 176.0 0.0 1.5e-51 175.7 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase PCuAC PF04314.13 BAJ50248.1 - 1.6e-10 40.7 0.6 3.6e-10 39.6 0.6 1.5 1 1 0 1 1 1 1 Copper chaperone PCu(A)C GTP_EFTU PF00009.27 BAJ50249.1 - 4.9e-51 173.0 0.0 1e-50 172.0 0.0 1.5 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 BAJ50249.1 - 1.3e-33 115.6 0.1 3.1e-33 114.4 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 BAJ50249.1 - 1.2e-15 57.7 1.4 4.7e-15 55.7 0.3 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAJ50249.1 - 0.00026 21.0 0.0 0.004 17.2 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 BAJ50249.1 - 0.02 14.8 1.0 0.067 13.1 1.0 1.9 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Gtr1_RagA PF04670.12 BAJ50249.1 - 0.063 12.6 0.2 0.76 9.1 0.0 2.5 2 1 0 2 2 2 0 Gtr1/RagA G protein conserved region Amelogenin PF02948.15 BAJ50249.1 - 0.082 13.5 0.7 0.27 11.9 0.0 1.9 1 1 0 2 2 2 0 Amelogenin Ribosomal_S10 PF00338.22 BAJ50250.1 - 9.5e-25 86.7 0.3 1.1e-24 86.5 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 BAJ50250.1 - 0.00023 21.9 0.0 0.00037 21.2 0.0 1.3 1 0 0 1 1 1 1 Primosomal protein N C-terminal domain ABC2_membrane_2 PF12679.7 BAJ50251.1 - 6e-11 42.1 14.7 7.5e-11 41.8 14.7 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 BAJ50251.1 - 1.2e-05 24.6 17.5 1.4e-05 24.4 17.5 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 BAJ50251.1 - 0.00069 19.2 3.7 0.001 18.7 3.7 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 BAJ50251.1 - 0.0031 17.5 5.0 0.0084 16.1 4.5 2.0 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 BAJ50252.1 - 1.8e-26 93.3 0.0 2.1e-25 89.9 0.0 2.0 1 1 1 2 2 2 1 ABC transporter AAA_21 PF13304.6 BAJ50252.1 - 2.5e-12 47.2 0.2 1.8e-05 24.7 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 BAJ50252.1 - 1.2e-06 29.1 0.2 3.5e-06 27.7 0.1 1.9 2 0 0 2 2 1 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 BAJ50252.1 - 0.00038 20.2 0.1 0.0019 17.9 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_23 PF13476.6 BAJ50252.1 - 0.00039 21.0 0.1 0.00062 20.3 0.1 1.6 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 BAJ50252.1 - 0.00089 18.8 0.0 0.037 13.5 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 BAJ50252.1 - 0.00092 18.9 0.2 0.0021 17.7 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain HMA PF00403.26 BAJ50252.1 - 0.0015 18.9 0.6 0.003 18.0 0.6 1.5 1 0 0 1 1 1 1 Heavy-metal-associated domain AAA_15 PF13175.6 BAJ50252.1 - 0.0075 16.0 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.6 BAJ50252.1 - 0.019 15.3 0.1 0.19 12.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 BAJ50252.1 - 0.02 14.8 0.3 0.14 12.1 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA PF00004.29 BAJ50252.1 - 0.021 15.2 1.5 0.2 12.1 1.5 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 BAJ50252.1 - 0.027 14.2 1.6 3.2 7.4 0.3 2.5 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 BAJ50252.1 - 0.028 14.8 0.1 0.045 14.1 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain SRP54 PF00448.22 BAJ50252.1 - 0.033 13.8 0.1 0.071 12.7 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain MeaB PF03308.16 BAJ50252.1 - 0.043 12.8 0.0 0.077 12.0 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_27 PF13514.6 BAJ50252.1 - 0.058 13.0 0.1 0.15 11.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 BAJ50252.1 - 0.061 13.2 0.1 0.16 11.9 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 BAJ50252.1 - 0.076 12.6 0.3 0.16 11.6 0.3 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain T2SSE PF00437.20 BAJ50252.1 - 0.079 12.0 1.4 0.17 10.9 0.3 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_22 PF13401.6 BAJ50252.1 - 0.082 13.2 0.3 0.26 11.6 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 BAJ50252.1 - 0.15 12.2 0.3 0.34 11.1 0.3 2.0 1 1 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 BAJ50252.1 - 0.16 11.6 0.1 3.3 7.3 0.0 2.5 3 0 0 3 3 3 0 Thymidylate kinase TrwB_AAD_bind PF10412.9 BAJ50252.1 - 0.21 10.4 0.5 1.5 7.7 0.0 2.2 2 1 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain PilN PF05137.13 BAJ50253.1 - 0.12 12.6 0.0 0.41 10.8 0.0 2.0 1 1 0 1 1 1 0 Fimbrial assembly protein (PilN) Aminotran_1_2 PF00155.21 BAJ50254.1 - 5.4e-56 190.3 0.0 7.3e-56 189.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 BAJ50254.1 - 1.4e-08 33.7 0.0 2.6e-08 32.8 0.0 1.5 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme CM_2 PF01817.21 BAJ50254.1 - 1.5e-07 31.7 2.5 4.3e-07 30.2 2.5 1.9 1 0 0 1 1 1 1 Chorismate mutase type II Aminotran_5 PF00266.19 BAJ50254.1 - 1.1e-06 27.8 0.0 1.7e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 BAJ50254.1 - 1.3e-05 24.7 0.0 2.3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 BAJ50254.1 - 0.00012 21.5 0.0 0.00025 20.4 0.0 1.5 1 0 0 1 1 1 1 Beta-eliminating lyase Alliinase_C PF04864.13 BAJ50254.1 - 0.077 11.8 0.0 0.26 10.1 0.0 1.8 2 0 0 2 2 2 0 Allinase DUF1059 PF06348.11 BAJ50254.1 - 0.79 10.0 5.1 25 5.2 0.3 4.1 5 0 0 5 5 5 0 Protein of unknown function (DUF1059) PDH PF02153.17 BAJ50255.1 - 8.8e-19 67.5 0.1 1.1e-18 67.3 0.1 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.15 BAJ50255.1 - 3.8e-16 59.6 0.0 7.3e-16 58.7 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 BAJ50255.1 - 2.4e-09 37.6 0.2 6.9e-09 36.2 0.2 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent HI0933_like PF03486.14 BAJ50255.1 - 2.4e-06 26.5 0.8 3.8e-06 25.9 0.1 1.7 2 0 0 2 2 2 1 HI0933-like protein Shikimate_DH PF01488.20 BAJ50255.1 - 4e-06 26.9 0.2 8.8e-06 25.8 0.2 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 3HCDH_N PF02737.18 BAJ50255.1 - 9.4e-06 25.6 0.2 2.6e-05 24.2 0.2 1.9 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 BAJ50255.1 - 9.4e-06 26.0 0.0 3.7e-05 24.1 0.0 2.2 1 1 0 1 1 1 1 Putative NAD(P)-binding NAD_binding_8 PF13450.6 BAJ50255.1 - 1.7e-05 25.0 0.1 4.8e-05 23.5 0.0 1.8 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 BAJ50255.1 - 3.2e-05 23.7 0.0 0.0002 21.1 0.0 1.9 1 1 1 2 2 2 1 FAD dependent oxidoreductase UDPG_MGDP_dh_C PF03720.15 BAJ50255.1 - 3.5e-05 24.1 0.0 9.3e-05 22.8 0.0 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 2-Hacid_dh_C PF02826.19 BAJ50255.1 - 3.6e-05 23.2 0.0 8.5e-05 22.0 0.0 1.7 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 BAJ50255.1 - 8.9e-05 21.9 1.3 0.00011 21.5 0.1 1.7 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 BAJ50255.1 - 0.00011 21.6 0.1 0.00031 20.1 0.1 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DpaA_N PF16924.5 BAJ50255.1 - 0.00012 22.1 0.0 0.00059 19.9 0.0 2.1 2 0 0 2 2 2 1 Dipicolinate synthase subunit A N-terminal domain TrkA_N PF02254.18 BAJ50255.1 - 0.0013 19.0 0.1 0.0038 17.5 0.1 1.8 1 1 0 1 1 1 1 TrkA-N domain Pyr_redox PF00070.27 BAJ50255.1 - 0.0023 18.5 0.0 0.007 16.9 0.0 1.9 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 BAJ50255.1 - 0.0037 17.5 0.1 0.0089 16.3 0.1 1.7 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 BAJ50255.1 - 0.0041 16.8 0.1 0.0065 16.1 0.1 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Glu_dehyd_C PF16912.5 BAJ50255.1 - 0.005 16.3 0.1 0.014 14.9 0.0 1.8 2 0 0 2 2 2 1 Glucose dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 BAJ50255.1 - 0.007 16.3 0.7 0.84 9.6 0.2 2.7 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 BAJ50255.1 - 0.0071 15.9 0.1 0.019 14.5 0.1 1.9 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.21 BAJ50255.1 - 0.0095 15.3 0.3 0.019 14.3 0.3 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain adh_short PF00106.25 BAJ50255.1 - 0.022 14.2 0.1 0.1 12.1 0.0 1.9 1 1 1 2 2 2 0 short chain dehydrogenase Pyr_redox_3 PF13738.6 BAJ50255.1 - 0.036 13.3 0.0 0.1 11.9 0.0 1.6 1 1 1 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 BAJ50255.1 - 0.07 13.6 0.0 0.12 12.9 0.0 1.6 1 1 0 1 1 1 0 XdhC Rossmann domain TIR_2 PF13676.6 BAJ50255.1 - 0.081 13.5 0.0 0.22 12.2 0.0 1.7 1 1 0 1 1 1 0 TIR domain NAD_binding_10 PF13460.6 BAJ50255.1 - 0.1 12.5 0.1 0.18 11.7 0.1 1.4 1 0 0 1 1 1 0 NAD(P)H-binding NAD_binding_9 PF13454.6 BAJ50255.1 - 0.11 12.5 0.0 0.25 11.3 0.0 1.6 1 1 0 1 1 1 0 FAD-NAD(P)-binding DUF364 PF04016.12 BAJ50255.1 - 0.12 11.9 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Putative heavy-metal chelation Epimerase PF01370.21 BAJ50255.1 - 0.16 11.4 0.0 0.23 10.9 0.0 1.4 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family FAD_binding_2 PF00890.24 BAJ50255.1 - 0.23 10.5 0.1 0.31 10.1 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain Nitroreductase PF00881.24 BAJ50256.1 - 4.8e-29 101.6 0.3 1.4e-13 51.2 0.0 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 BAJ50256.1 - 7.4e-12 45.3 0.0 5.1e-06 26.2 0.0 2.1 1 1 1 2 2 2 2 Putative TM nitroreductase TrmB PF01978.19 BAJ50257.1 - 4.4e-05 23.3 0.0 0.00015 21.5 0.0 1.9 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 BAJ50257.1 - 5.9e-05 22.9 0.1 0.00021 21.1 0.0 1.9 2 0 0 2 2 2 1 MarR family TBPIP PF07106.13 BAJ50257.1 - 6.9e-05 22.7 0.1 0.33 10.9 0.1 3.0 3 0 0 3 3 3 2 TBPIP/Hop2 winged helix domain HTH_5 PF01022.20 BAJ50257.1 - 0.0002 21.1 0.0 0.00055 19.8 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 BAJ50257.1 - 0.00024 21.0 0.0 0.00091 19.2 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_27 PF13463.6 BAJ50257.1 - 0.0004 20.8 0.0 0.0014 19.1 0.0 1.9 2 0 0 2 2 1 1 Winged helix DNA-binding domain Rrf2 PF02082.20 BAJ50257.1 - 0.00067 20.0 0.1 0.0028 17.9 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulator HTH_20 PF12840.7 BAJ50257.1 - 0.0016 18.4 0.0 0.005 16.9 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 BAJ50257.1 - 0.0041 16.7 1.8 0.08 12.6 0.1 3.0 3 0 0 3 3 3 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 BAJ50257.1 - 0.012 15.5 0.0 0.052 13.5 0.0 2.1 2 0 0 2 2 2 0 MarR family HTH_47 PF16221.5 BAJ50257.1 - 0.025 14.1 0.5 13 5.5 0.0 3.3 3 0 0 3 3 3 0 winged helix-turn-helix BLACT_WH PF17778.1 BAJ50257.1 - 0.027 14.4 0.2 0.56 10.2 0.0 2.8 3 0 0 3 3 3 0 Beta-lactamase associated winged helix domain DUF3085 PF11284.8 BAJ50257.1 - 0.028 14.7 0.0 0.064 13.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3085) HrcA_DNA-bdg PF03444.15 BAJ50257.1 - 0.035 13.8 0.0 0.088 12.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DUF910 PF06014.11 BAJ50257.1 - 0.065 13.2 0.3 0.23 11.5 0.1 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF910) DUF1495 PF07381.11 BAJ50257.1 - 0.067 13.0 0.1 0.64 9.9 0.1 2.4 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) PadR PF03551.14 BAJ50257.1 - 0.07 13.1 0.0 0.67 9.9 0.0 2.5 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family Dimerisation2 PF16864.5 BAJ50257.1 - 0.088 12.8 0.0 1.2 9.1 0.0 2.4 3 0 0 3 3 3 0 Dimerisation domain RPE65 PF03055.15 BAJ50257.1 - 0.097 11.8 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 Retinal pigment epithelial membrane protein Prim-Pol PF09250.11 BAJ50258.1 - 1e-14 55.2 0.0 1.3e-14 54.9 0.0 1.1 1 0 0 1 1 1 1 Bifunctional DNA primase/polymerase, N-terminal AAA_23 PF13476.6 BAJ50260.1 - 0.0017 18.9 0.0 0.0026 18.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain CEP209_CC5 PF16574.5 BAJ50260.1 - 0.0029 17.8 0.8 0.0049 17.0 0.8 1.3 1 0 0 1 1 1 1 Coiled-coil region of centrosome protein CE290 DUF3631 PF12307.8 BAJ50260.1 - 0.012 15.8 0.0 0.021 15.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3631) AAA_15 PF13175.6 BAJ50260.1 - 0.21 11.3 0.0 0.37 10.4 0.0 1.4 2 0 0 2 2 2 0 AAA ATPase domain ABC_tran PF00005.27 BAJ50261.1 - 2.7e-08 34.4 0.0 0.0013 19.2 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_22 PF13401.6 BAJ50261.1 - 1.2e-06 28.8 0.0 7.3e-05 23.1 0.0 2.4 2 0 0 2 2 2 1 AAA domain Acetyltransf_1 PF00583.25 BAJ50261.1 - 4.2e-05 23.8 0.0 0.00018 21.8 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family AAA_16 PF13191.6 BAJ50261.1 - 0.00026 21.4 0.0 0.00091 19.6 0.0 1.9 2 1 0 2 2 2 1 AAA ATPase domain NACHT PF05729.12 BAJ50261.1 - 0.0019 18.1 0.0 0.062 13.2 0.0 2.7 3 0 0 3 3 3 1 NACHT domain Acetyltransf_7 PF13508.7 BAJ50261.1 - 0.0034 17.8 0.0 0.0078 16.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 BAJ50261.1 - 0.0086 16.0 0.0 0.021 14.8 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PIF1 PF05970.14 BAJ50261.1 - 0.025 13.8 0.0 0.042 13.0 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase AAA PF00004.29 BAJ50261.1 - 0.026 14.9 0.0 0.14 12.6 0.0 2.2 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Acetyltransf_CG PF14542.6 BAJ50261.1 - 0.027 14.6 0.0 0.066 13.3 0.0 1.7 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 BAJ50261.1 - 0.03 13.8 0.0 0.061 12.8 0.0 1.5 2 0 0 2 2 2 0 Putative acetyl-transferase RNA_helicase PF00910.22 BAJ50261.1 - 0.032 14.6 0.0 0.16 12.4 0.0 2.0 2 0 0 2 2 2 0 RNA helicase Acetyltransf_9 PF13527.7 BAJ50261.1 - 0.036 14.1 0.0 0.087 12.9 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain SH3_2 PF07653.17 BAJ50261.1 - 0.056 13.1 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 Variant SH3 domain AAA_18 PF13238.6 BAJ50261.1 - 0.075 13.6 0.0 0.16 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAJ50261.1 - 0.082 12.7 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 BAJ50261.1 - 0.11 12.0 0.5 1.1 8.8 0.1 2.4 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 BAJ50261.1 - 0.17 11.6 0.0 0.54 9.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain ACR_tran PF00873.19 BAJ50262.1 - 0.035 11.8 2.7 0.033 11.9 2.7 1.1 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF2663 PF10864.8 BAJ50262.1 - 0.082 13.3 0.6 0.082 13.3 0.6 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2663) p53-inducible11 PF14936.6 BAJ50262.1 - 0.43 10.6 7.1 0.84 9.7 7.1 1.7 1 1 0 1 1 1 0 Tumour protein p53-inducible protein 11 DUF2070 PF09843.9 BAJ50262.1 - 0.98 7.6 10.7 1.4 7.1 10.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2721 PF11026.8 BAJ50262.1 - 2.3 8.1 15.5 0.17 11.8 3.6 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2721) LapA_dom PF06305.11 BAJ50262.1 - 3.8 7.4 7.3 1.1 9.1 0.2 3.1 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain CPBP PF02517.16 BAJ50262.1 - 5.7 7.4 12.7 1.4e+02 2.9 12.7 2.3 1 1 0 1 1 1 0 CPBP intramembrane metalloprotease Phage_integrase PF00589.22 BAJ50263.1 - 7.7e-25 87.7 0.0 2e-24 86.3 0.0 1.7 2 0 0 2 2 2 1 Phage integrase family Phage_int_SAM_1 PF02899.17 BAJ50263.1 - 0.0001 22.5 0.1 0.0003 21.0 0.1 1.7 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 BAJ50263.1 - 0.00018 21.9 0.0 0.00041 20.8 0.0 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain TMEM154 PF15102.6 BAJ50264.1 - 0.0046 16.9 0.7 0.0088 16.0 0.7 1.5 1 0 0 1 1 1 1 TMEM154 protein family Glyco_trans_2_3 PF13632.6 BAJ50265.1 - 3.7e-15 56.4 0.3 3.7e-15 56.4 0.3 1.8 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 BAJ50265.1 - 3.3e-11 43.5 0.0 5e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Cellulose_synt PF03552.14 BAJ50265.1 - 0.011 14.2 0.0 0.017 13.7 0.0 1.1 1 0 0 1 1 1 0 Cellulose synthase AP_endonuc_2 PF01261.24 BAJ50266.1 - 1.9e-33 115.7 0.0 3.3e-33 114.9 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 BAJ50266.1 - 1.5e-17 63.0 0.0 3e-17 62.1 0.0 1.5 1 0 0 1 1 1 1 AP endonuclease family 2 C terminus H_PPase PF03030.16 BAJ50267.1 - 2.7e-227 756.5 36.0 3.1e-227 756.3 36.0 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase EI24 PF07264.11 BAJ50267.1 - 0.098 12.9 38.7 3.6 7.8 0.0 4.4 3 1 1 4 4 4 0 Etoposide-induced protein 2.4 (EI24) Sec34 PF04136.15 BAJ50268.1 - 0.2 11.5 1.0 7.5 6.4 0.1 2.5 2 1 0 2 2 2 0 Sec34-like family DUF2312 PF10073.9 BAJ50268.1 - 0.34 10.6 3.1 0.63 9.7 0.0 2.8 3 1 1 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2312) Oxidored_molyb PF00174.19 BAJ50269.1 - 8.9e-38 129.6 0.1 1.4e-37 129.0 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Flavin_Reduct PF01613.18 BAJ50270.1 - 4e-16 59.4 0.0 4.5e-16 59.3 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain NT5C PF06941.12 BAJ50271.1 - 2e-16 60.4 0.7 2.5e-16 60.1 0.7 1.0 1 0 0 1 1 1 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HAD_SAK_2 PF18143.1 BAJ50271.1 - 0.15 12.4 4.0 0.32 11.3 4.0 1.7 1 1 0 1 1 1 0 HAD domain in Swiss Army Knife RNA repair proteins DEAD PF00270.29 BAJ50272.1 - 9.5e-16 58.0 0.0 2.1e-15 56.9 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAJ50272.1 - 3e-14 53.3 0.1 6.5e-13 49.0 0.1 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain AAA_30 PF13604.6 BAJ50272.1 - 0.001 18.8 0.0 0.0031 17.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 BAJ50272.1 - 0.023 14.7 0.0 0.046 13.7 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 BAJ50272.1 - 0.026 14.9 0.0 0.049 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain GGACT PF06094.12 BAJ50273.1 - 2.9e-18 66.6 0.1 3.5e-18 66.4 0.1 1.1 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 BAJ50273.1 - 2.1e-12 47.2 0.1 2.8e-12 46.9 0.1 1.2 1 0 0 1 1 1 1 AIG2-like family ChaC PF04752.12 BAJ50273.1 - 0.015 15.4 0.6 0.035 14.2 0.3 1.7 1 1 1 2 2 2 0 ChaC-like protein DAO PF01266.24 BAJ50274.1 - 2.6e-44 152.2 0.0 3.3e-44 151.9 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 BAJ50274.1 - 4.4e-06 26.2 0.2 0.048 12.9 0.0 2.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 BAJ50274.1 - 1.6e-05 24.2 0.8 0.00025 20.3 0.8 2.1 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 BAJ50274.1 - 2.2e-05 23.8 0.7 0.00012 21.4 0.2 2.1 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 BAJ50274.1 - 4.3e-05 23.7 1.2 9.2e-05 22.6 1.2 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 BAJ50274.1 - 0.0014 19.2 0.8 0.023 15.2 0.3 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Mqo PF06039.15 BAJ50274.1 - 0.0025 16.4 0.0 0.0034 16.0 0.0 1.1 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) GIDA PF01134.22 BAJ50274.1 - 0.0058 15.8 0.2 2.3 7.2 0.2 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_oxidored PF12831.7 BAJ50274.1 - 0.0085 15.5 0.2 0.012 15.0 0.2 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 BAJ50274.1 - 0.0094 14.7 0.3 1 8.0 0.2 2.2 2 0 0 2 2 2 2 HI0933-like protein Lycopene_cycl PF05834.12 BAJ50274.1 - 0.031 13.3 0.3 0.73 8.8 0.2 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein Pyr_redox_3 PF13738.6 BAJ50274.1 - 0.059 12.6 0.8 2.5 7.3 0.5 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 BAJ50274.1 - 0.21 11.6 3.8 6.1 6.8 0.2 3.0 2 1 1 3 3 3 0 FAD-NAD(P)-binding Trp_halogenase PF04820.14 BAJ50274.1 - 0.32 9.8 0.4 0.46 9.3 0.4 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Diphthamide_syn PF01866.17 BAJ50275.1 - 1.3e-64 218.6 0.0 1.5e-64 218.3 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein DUF1847 PF08901.11 BAJ50275.1 - 0.0043 16.7 0.0 0.43 10.2 0.0 2.6 3 0 0 3 3 3 2 Protein of unknown function (DUF1847) ACT_7 PF13840.6 BAJ50275.1 - 0.021 14.6 0.0 0.05 13.4 0.0 1.6 1 0 0 1 1 1 0 ACT domain Prok-RING_1 PF14446.6 BAJ50276.1 - 0.0019 18.1 0.2 0.0033 17.3 0.2 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.6 BAJ50276.1 - 0.0074 15.7 3.7 0.23 10.9 4.2 2.4 1 1 1 2 2 2 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 BAJ50276.1 - 0.0093 15.7 0.8 0.022 14.5 0.8 1.7 1 0 0 1 1 1 1 zinc-ribbon domain ECR1_N PF14382.6 BAJ50276.1 - 0.013 15.3 0.1 0.052 13.4 0.0 2.0 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region zf-C2HC5 PF06221.13 BAJ50276.1 - 0.043 13.8 0.5 0.16 12.0 0.5 1.8 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type RecR PF02132.15 BAJ50276.1 - 0.092 12.3 3.9 0.91 9.1 3.9 2.3 1 1 0 1 1 1 0 RecR protein OrfB_Zn_ribbon PF07282.11 BAJ50276.1 - 0.14 12.1 1.2 0.24 11.3 1.2 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain PHD PF00628.29 BAJ50276.1 - 0.16 11.9 2.4 0.24 11.3 2.4 1.2 1 0 0 1 1 1 0 PHD-finger A2L_zn_ribbon PF08792.10 BAJ50276.1 - 0.28 10.9 1.9 0.61 9.9 1.9 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.12 BAJ50276.1 - 0.72 9.4 6.2 1.9 8.1 4.1 2.4 1 1 0 1 1 1 0 TFIIB zinc-binding RNA_pol_L_2 PF13656.6 BAJ50277.1 - 1.4e-14 53.6 0.0 1.8e-14 53.2 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 BAJ50277.1 - 0.0034 16.8 0.0 0.0054 16.1 0.0 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain TBPIP PF07106.13 BAJ50277.1 - 0.085 12.8 0.2 0.14 12.1 0.2 1.4 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain tRNA-synt_1_2 PF13603.6 BAJ50277.1 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 TFIIS_C PF01096.18 BAJ50278.1 - 1.5e-20 72.8 16.2 2.1e-20 72.3 5.2 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) Zn_Tnp_IS1595 PF12760.7 BAJ50278.1 - 1.3e-08 34.7 7.9 0.00017 21.5 0.7 2.2 2 0 0 2 2 2 2 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.6 BAJ50278.1 - 1.4e-07 30.7 9.6 0.076 12.5 0.2 4.1 4 0 0 4 4 4 2 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 BAJ50278.1 - 2.8e-06 27.1 6.2 5.2e-06 26.2 0.4 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit zinc_ribbon_2 PF13240.6 BAJ50278.1 - 8.9e-06 25.3 14.1 0.041 13.6 0.2 4.2 4 0 0 4 4 4 2 zinc-ribbon domain DZR PF12773.7 BAJ50278.1 - 1.9e-05 24.6 9.2 0.0012 18.9 0.7 2.8 2 1 0 2 2 2 2 Double zinc ribbon TF_Zn_Ribbon PF08271.12 BAJ50278.1 - 9.5e-05 21.8 11.6 0.033 13.7 1.2 3.6 2 2 1 3 3 3 3 TFIIB zinc-binding DUF2387 PF09526.10 BAJ50278.1 - 0.00011 22.3 7.4 0.024 14.8 1.8 2.4 2 1 0 2 2 2 2 Probable metal-binding protein (DUF2387) Nudix_N_2 PF14803.6 BAJ50278.1 - 0.00067 19.5 11.4 0.069 13.1 3.5 3.7 3 1 0 3 3 3 1 Nudix N-terminal OrfB_Zn_ribbon PF07282.11 BAJ50278.1 - 0.0011 18.8 9.8 0.14 12.1 1.8 2.5 2 1 0 2 2 2 2 Putative transposase DNA-binding domain zf_UBZ PF18439.1 BAJ50278.1 - 0.0011 18.5 7.7 1.4 8.6 0.1 4.1 4 0 0 4 4 4 1 Ubiquitin-Binding Zinc Finger zinc_ribbon_4 PF13717.6 BAJ50278.1 - 0.0017 18.3 13.8 0.35 10.8 0.7 4.0 3 1 0 3 3 3 1 zinc-ribbon domain zf-TFIIB PF13453.6 BAJ50278.1 - 0.0023 17.2 1.1 0.0023 17.2 1.1 2.6 2 1 0 2 2 2 1 Transcription factor zinc-finger Zn-ribbon_8 PF09723.10 BAJ50278.1 - 0.0031 17.6 12.9 1.1 9.5 0.1 3.9 3 1 0 3 3 3 1 Zinc ribbon domain Rubredoxin_2 PF18073.1 BAJ50278.1 - 0.0045 16.7 17.7 0.55 10.0 1.2 4.1 4 0 0 4 4 4 2 Rubredoxin metal binding domain DNA_RNApol_7kD PF03604.13 BAJ50278.1 - 0.0056 16.3 8.1 4.4 7.1 1.8 3.6 3 1 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_13 PF09855.9 BAJ50278.1 - 0.0059 16.7 8.0 9.3 6.5 0.1 4.1 4 0 0 4 4 4 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) PhnA_Zn_Ribbon PF08274.12 BAJ50278.1 - 0.0068 16.3 8.1 2.8 8.0 1.2 3.9 3 1 0 3 3 3 1 PhnA Zinc-Ribbon UPF0547 PF10571.9 BAJ50278.1 - 0.0073 16.4 15.4 3.2 7.9 0.2 4.2 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 Lar_restr_allev PF14354.6 BAJ50278.1 - 0.0084 16.5 8.2 0.13 12.7 0.5 2.4 1 1 0 2 2 2 1 Restriction alleviation protein Lar TackOD1 PF18551.1 BAJ50278.1 - 0.011 15.4 3.2 0.62 9.7 0.3 2.3 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 Baculo_LEF5_C PF11792.8 BAJ50278.1 - 0.012 15.3 0.3 0.012 15.3 0.3 2.8 3 0 0 3 3 3 0 Baculoviridae late expression factor 5 C-terminal domain IBR PF01485.21 BAJ50278.1 - 0.014 15.6 6.5 1.3 9.3 1.1 3.1 3 0 0 3 3 3 0 IBR domain, a half RING-finger domain eIF-5_eIF-2B PF01873.17 BAJ50278.1 - 0.021 14.7 7.7 1.2 9.0 0.5 3.0 3 0 0 3 3 3 0 Domain found in IF2B/IF5 zinc-ribbons_6 PF07191.12 BAJ50278.1 - 0.026 14.5 7.3 0.21 11.6 0.4 2.4 2 1 0 2 2 2 0 zinc-ribbons A2L_zn_ribbon PF08792.10 BAJ50278.1 - 0.026 14.2 10.1 6.6 6.6 0.0 4.0 4 0 0 4 4 4 0 A2L zinc ribbon domain HypA PF01155.19 BAJ50278.1 - 0.04 13.9 8.3 1 9.4 0.7 3.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_10 PF10058.9 BAJ50278.1 - 0.055 13.2 8.2 0.21 11.3 1.4 3.6 3 1 0 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-SNAP50_C PF12251.8 BAJ50278.1 - 0.056 13.1 0.4 0.12 12.1 0.4 1.5 1 0 0 1 1 1 0 snRNA-activating protein of 50kDa MW C terminal Prok-RING_1 PF14446.6 BAJ50278.1 - 0.064 13.2 7.3 1.2 9.1 0.5 2.8 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 DUF104 PF01954.16 BAJ50278.1 - 0.089 13.2 0.2 0.14 12.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF104 Elf1 PF05129.13 BAJ50278.1 - 0.093 12.8 8.2 10 6.2 0.2 3.2 1 1 0 2 2 2 0 Transcription elongation factor Elf1 like zinc_ribbon_9 PF14369.6 BAJ50278.1 - 0.11 12.8 7.0 0.63 10.4 0.2 3.3 3 1 0 3 3 3 0 zinc-ribbon zf_C2H2_13 PF18508.1 BAJ50278.1 - 0.11 12.1 6.2 6.6 6.4 0.1 4.0 4 0 0 4 4 4 0 Zinc finger domain zf-IS66 PF13005.7 BAJ50278.1 - 0.12 12.8 10.1 6.8 7.2 0.2 3.9 4 0 0 4 4 4 0 zinc-finger binding domain of transposase IS66 Sgf11 PF08209.11 BAJ50278.1 - 0.19 11.3 8.8 14 5.4 0.0 3.9 4 0 0 4 4 4 0 Sgf11 (transcriptional regulation protein) CpXC PF14353.6 BAJ50278.1 - 0.31 11.1 11.7 15 5.6 0.1 3.9 2 1 0 3 3 3 0 CpXC protein PriA_CRR PF18319.1 BAJ50278.1 - 0.43 10.6 0.1 0.43 10.6 0.1 3.7 4 0 0 4 4 4 0 PriA DNA helicase Cys-rich region (CRR) domain DpnI PF06044.12 BAJ50278.1 - 0.45 10.1 3.2 4.9 6.8 0.3 2.2 1 1 0 2 2 2 0 Dam-replacing family Ribosomal_L32p PF01783.23 BAJ50278.1 - 0.48 10.7 7.1 16 5.8 0.0 3.7 3 1 0 3 3 3 0 Ribosomal L32p protein family NMD3 PF04981.13 BAJ50278.1 - 0.64 9.4 7.9 2.6 7.5 1.5 2.5 1 1 1 2 2 2 0 NMD3 family zf-Mss51 PF13824.6 BAJ50278.1 - 1 9.5 11.8 9 6.5 3.1 3.2 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 ribosomal_L24 PF17136.4 BAJ50278.1 - 1.2 9.5 4.6 1.6 9.2 0.6 2.6 1 1 0 2 2 2 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 YhfH PF14149.6 BAJ50278.1 - 1.3 9.1 9.9 28 4.8 0.1 4.2 4 0 0 4 4 4 0 YhfH-like protein Ribosomal_L37ae PF01780.19 BAJ50278.1 - 1.4 9.0 9.0 14 5.9 2.6 3.0 1 1 1 2 2 2 0 Ribosomal L37ae protein family Auto_anti-p27 PF06677.12 BAJ50278.1 - 1.6 8.9 9.7 5.9 7.1 2.6 3.0 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Zn_ribbon_recom PF13408.6 BAJ50278.1 - 1.8 9.1 15.8 5.8 7.5 4.6 3.7 2 2 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-RING_5 PF14634.6 BAJ50278.1 - 2 8.5 9.6 1.4e+02 2.5 5.7 3.3 2 1 0 2 2 2 0 zinc-RING finger domain NOB1_Zn_bind PF08772.11 BAJ50278.1 - 2.5 8.3 14.9 4.7 7.4 1.0 3.8 1 1 3 4 4 4 0 Nin one binding (NOB1) Zn-ribbon like zf-ZPR1 PF03367.13 BAJ50278.1 - 2.5 7.9 8.4 0.38 10.6 0.2 2.8 2 1 0 2 2 2 0 ZPR1 zinc-finger domain zf-NADH-PPase PF09297.11 BAJ50278.1 - 2.6 7.8 17.6 1.6 8.5 0.2 3.7 3 1 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain GFA PF04828.14 BAJ50278.1 - 2.9 8.3 8.8 21 5.6 0.4 3.3 1 1 3 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme ADK_lid PF05191.14 BAJ50278.1 - 3.5 7.7 10.5 26 4.9 0.2 4.0 4 0 0 4 4 4 0 Adenylate kinase, active site lid zinc_ribbon_15 PF17032.5 BAJ50278.1 - 4.6 8.1 12.0 1.3 9.9 0.6 3.2 1 1 1 3 3 3 0 zinc-ribbon family Vps36-NZF-N PF16988.5 BAJ50278.1 - 5.4 6.5 9.5 2.9 7.4 0.6 2.8 2 2 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain RNHCP PF12647.7 BAJ50278.1 - 5.5 7.0 7.4 42 4.2 2.8 2.9 1 1 2 3 3 3 0 RNHCP domain Zn_Tnp_IS91 PF14319.6 BAJ50278.1 - 6.2 6.9 14.1 2.2 8.4 1.2 3.8 2 2 2 4 4 4 0 Transposase zinc-binding domain Ogr_Delta PF04606.12 BAJ50278.1 - 6.8 6.8 11.6 3.1 7.9 2.6 3.2 2 2 0 2 2 2 0 Ogr/Delta-like zinc finger zf-RRN7 PF11781.8 BAJ50278.1 - 7 6.4 12.9 14 5.4 0.3 3.9 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-FPG_IleRS PF06827.14 BAJ50278.1 - 7.4 6.5 16.8 6.9 6.6 4.9 3.7 3 1 0 3 3 3 0 Zinc finger found in FPG and IleRS DUF1610 PF07754.11 BAJ50278.1 - 8.6 6.4 11.1 5.5 7.1 1.3 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) HTH_3 PF01381.22 BAJ50279.1 - 0.006 16.6 0.0 0.013 15.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_26 PF13443.6 BAJ50279.1 - 0.029 14.8 0.0 0.064 13.7 0.0 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain RHH_3 PF12651.7 BAJ50279.1 - 0.03 14.3 0.0 0.1 12.6 0.0 1.8 1 0 0 1 1 1 0 Ribbon-helix-helix domain Rabaptin PF03528.15 BAJ50279.1 - 0.11 11.1 0.0 0.16 10.6 0.0 1.1 1 0 0 1 1 1 0 Rabaptin Ald_Xan_dh_C2 PF02738.18 BAJ50280.1 - 6.3e-153 510.1 0.1 9.2e-153 509.6 0.1 1.2 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50280.1 - 5.3e-27 94.4 0.3 1.1e-26 93.4 0.3 1.5 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Fer2_2 PF01799.20 BAJ50281.1 - 1.6e-25 88.9 0.1 2.9e-25 88.1 0.1 1.4 1 0 0 1 1 1 1 [2Fe-2S] binding domain Fer2 PF00111.27 BAJ50281.1 - 1.1e-06 28.5 2.5 1.2e-06 28.4 0.4 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 BAJ50281.1 - 0.0023 17.9 0.5 0.0031 17.5 0.5 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain DHODB_Fe-S_bind PF10418.9 BAJ50281.1 - 0.18 11.6 4.8 0.55 10.1 4.8 1.8 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CE2_N PF17996.1 BAJ50281.1 - 0.19 11.7 0.0 0.33 11.0 0.0 1.4 1 1 0 1 1 1 0 Carbohydrate esterase 2 N-terminal FAD_binding_5 PF00941.21 BAJ50282.1 - 3.8e-27 95.1 0.0 6.3e-27 94.4 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 BAJ50282.1 - 2e-14 53.6 0.0 3.1e-14 53.0 0.0 1.3 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Amidohydro_1 PF01979.20 BAJ50283.1 - 7.4e-28 97.9 0.1 9.6e-28 97.5 0.1 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 BAJ50283.1 - 1e-13 51.6 0.5 4.8e-07 29.6 0.0 3.1 1 1 0 2 2 2 2 Amidohydrolase family Urease_alpha PF00449.20 BAJ50283.1 - 6.1e-06 26.6 0.2 1.4e-05 25.4 0.2 1.5 1 0 0 1 1 1 1 Urease alpha-subunit, N-terminal domain Amidohydro_2 PF04909.14 BAJ50283.1 - 0.11 12.3 0.0 0.28 10.9 0.0 1.6 1 1 0 1 1 1 0 Amidohydrolase Memo PF01875.17 BAJ50284.1 - 2e-77 260.0 0.0 2.2e-77 259.8 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.18 BAJ50284.1 - 0.018 14.1 0.0 0.04 13.0 0.0 1.6 1 1 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase GHMP_kinases_C PF08544.13 BAJ50285.1 - 8.2e-17 61.4 1.2 3.2e-16 59.5 0.2 2.3 2 0 0 2 2 2 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 BAJ50285.1 - 2e-15 56.8 0.2 4.9e-15 55.5 0.2 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GalKase_gal_bdg PF10509.9 BAJ50285.1 - 3.1e-05 23.4 0.0 6.5e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 Galactokinase galactose-binding signature AA_kinase PF00696.28 BAJ50286.1 - 5.6e-47 160.4 0.4 6.3e-47 160.2 0.4 1.0 1 0 0 1 1 1 1 Amino acid kinase family FMN_dh PF01070.18 BAJ50287.1 - 8.1e-30 104.0 0.1 1.9e-26 92.9 0.1 2.2 1 1 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 BAJ50287.1 - 1.1e-07 31.1 2.3 0.00015 20.9 0.3 3.4 3 1 1 4 4 4 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 BAJ50287.1 - 0.0001 21.6 2.2 0.00033 19.9 2.2 1.7 1 1 0 1 1 1 1 Conserved region in glutamate synthase DHO_dh PF01180.21 BAJ50287.1 - 0.00039 19.7 0.1 0.00082 18.7 0.1 1.7 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase NMO PF03060.15 BAJ50287.1 - 0.0012 18.3 1.6 0.0016 17.9 0.4 1.7 2 0 0 2 2 2 1 Nitronate monooxygenase DUF561 PF04481.12 BAJ50287.1 - 0.0018 17.5 0.0 0.0064 15.7 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF561) ThiG PF05690.14 BAJ50287.1 - 0.42 9.9 6.4 4.5 6.5 0.1 2.9 1 1 2 3 3 3 0 Thiazole biosynthesis protein ThiG tRNA-synt_1c PF00749.21 BAJ50288.1 - 2.5e-71 240.1 0.0 3.2e-71 239.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 BAJ50288.1 - 6e-28 97.9 0.0 1e-27 97.1 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain Lig_C PF18330.1 BAJ50288.1 - 0.057 13.4 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Ligase Pab1020 C-terminal region Ribosomal_L7Ae PF01248.26 BAJ50289.1 - 1.6e-30 104.6 0.1 2e-30 104.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNase_P_pop3 PF08228.11 BAJ50289.1 - 0.014 15.5 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 RNase P subunit Pop3 Ribosomal_S28e PF01200.18 BAJ50290.1 - 1.7e-30 104.8 4.5 1.9e-30 104.7 4.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L24e PF01246.20 BAJ50291.1 - 7.7e-19 67.7 2.0 8.4e-19 67.6 2.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.14 BAJ50291.1 - 8.4e-05 22.4 2.6 0.00014 21.8 2.6 1.3 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif DUF3268 PF11672.8 BAJ50291.1 - 0.00095 19.5 0.2 0.001 19.4 0.2 1.0 1 0 0 1 1 1 1 zinc-finger-containing domain zf-FLZ PF04570.14 BAJ50291.1 - 0.0083 15.6 2.5 0.016 14.6 2.5 1.5 1 1 0 1 1 1 1 zinc-finger of the FCS-type, C2-C2 zf-C4_ClpX PF06689.13 BAJ50291.1 - 0.079 12.9 2.9 0.085 12.8 2.2 1.6 1 1 0 1 1 1 0 ClpX C4-type zinc finger DUF2256 PF10013.9 BAJ50291.1 - 2.6 8.2 12.2 1 9.5 6.7 2.5 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) NDK PF00334.19 BAJ50292.1 - 2.3e-50 170.1 0.0 2.7e-50 169.9 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase MycE_N PF17843.1 BAJ50292.1 - 0.071 13.6 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 MycE methyltransferase N-terminal DUF2840 PF11000.8 BAJ50292.1 - 0.088 12.6 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2840) GTP_EFTU PF00009.27 BAJ50293.1 - 1e-26 93.7 0.0 5.9e-26 91.2 0.0 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 BAJ50293.1 - 1.7e-24 85.9 0.3 3.2e-24 85.0 0.3 1.5 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 BAJ50293.1 - 1.4e-07 31.8 2.8 1.9e-07 31.4 0.8 2.2 2 1 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAJ50293.1 - 0.00038 20.5 0.0 0.0008 19.5 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase MeaB PF03308.16 BAJ50293.1 - 0.0038 16.3 0.0 0.014 14.4 0.0 1.8 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 BAJ50293.1 - 0.092 12.6 0.1 1.2 9.0 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase PIN_9 PF18477.1 BAJ50294.1 - 9.6e-15 54.9 0.0 1.1e-14 54.7 0.0 1.0 1 0 0 1 1 1 1 PIN like domain RHH_5 PF07878.11 BAJ50294.1 - 0.036 14.0 0.1 0.28 11.1 0.0 2.2 2 0 0 2 2 2 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 PIN_4 PF13638.6 BAJ50294.1 - 0.1 12.9 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 PIN domain RHH_1 PF01402.21 BAJ50294.1 - 0.18 11.8 1.6 0.26 11.3 0.1 2.0 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family SHS2_Rpb7-N PF03876.17 BAJ50295.1 - 2.5e-14 53.4 0.0 4.2e-14 52.7 0.0 1.4 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 BAJ50295.1 - 1.4e-13 51.0 0.1 3.1e-13 49.8 0.1 1.6 1 0 0 1 1 1 1 S1 RNA binding domain Spt4 PF06093.13 BAJ50296.1 - 9e-14 51.3 0.3 1.1e-13 51.1 0.3 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger Laminin_EGF PF00053.24 BAJ50296.1 - 0.01 16.0 0.9 0.013 15.6 0.9 1.2 1 0 0 1 1 1 0 Laminin EGF domain DUF359 PF04019.12 BAJ50297.1 - 1.9e-32 111.6 0.5 2.6e-32 111.1 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Ribosomal_S27 PF01599.19 BAJ50298.1 - 9.8e-15 54.5 2.9 1.1e-14 54.3 2.9 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a Zn_Tnp_IS1595 PF12760.7 BAJ50298.1 - 0.00033 20.5 0.9 0.00045 20.1 0.9 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Ribosomal_L37e PF01907.19 BAJ50298.1 - 0.0016 18.5 2.4 0.0021 18.2 2.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e IBR PF01485.21 BAJ50298.1 - 0.0027 17.9 0.1 0.0035 17.5 0.1 1.1 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain TF_Zn_Ribbon PF08271.12 BAJ50298.1 - 0.0038 16.7 3.3 0.0057 16.2 3.3 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding zinc_ribbon_4 PF13717.6 BAJ50298.1 - 0.021 14.7 2.8 0.45 10.5 2.4 2.4 1 1 1 2 2 2 0 zinc-ribbon domain Mu-like_Com PF10122.9 BAJ50298.1 - 0.027 13.9 1.1 0.075 12.5 0.0 1.9 2 0 0 2 2 2 0 Mu-like prophage protein Com OrfB_Zn_ribbon PF07282.11 BAJ50298.1 - 0.031 14.2 1.8 0.06 13.3 1.8 1.5 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zf-DNL PF05180.12 BAJ50298.1 - 0.044 13.7 1.0 1.1 9.3 0.0 2.1 1 1 1 2 2 2 0 DNL zinc finger zf_C2H2_10 PF18414.1 BAJ50298.1 - 0.071 12.7 1.0 9.1 5.9 0.1 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger HypA PF01155.19 BAJ50298.1 - 0.072 13.1 0.1 0.072 13.1 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Nudix_N_2 PF14803.6 BAJ50298.1 - 0.086 12.8 4.9 1.2 9.1 4.9 2.1 1 1 0 1 1 1 0 Nudix N-terminal zf-Mss51 PF13824.6 BAJ50298.1 - 0.24 11.5 4.2 2.8 8.1 0.3 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-HIT PF04438.16 BAJ50298.1 - 0.35 10.8 6.4 4.1 7.4 0.2 2.3 2 0 0 2 2 2 0 HIT zinc finger zf_UBZ PF18439.1 BAJ50298.1 - 0.42 10.3 3.1 11 5.7 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger RNA_POL_M_15KD PF02150.16 BAJ50298.1 - 0.86 9.5 4.1 30 4.6 4.9 2.1 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit zf-ribbon_3 PF13248.6 BAJ50298.1 - 1.6 8.3 6.6 2 7.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_S24e PF01282.19 BAJ50299.1 - 1.3e-13 50.7 0.0 2e-13 50.1 0.0 1.3 1 1 0 1 1 1 1 Ribosomal protein S24e Ribosomal_S6e PF01092.19 BAJ50300.1 - 2.2e-46 156.9 0.8 5.1e-46 155.7 0.8 1.5 1 1 0 1 1 1 1 Ribosomal protein S6e KH_7 PF17214.3 BAJ50300.1 - 0.14 12.2 1.5 0.25 11.3 1.5 1.4 1 0 0 1 1 1 0 KH domain GTP_EFTU_D4 PF14578.6 BAJ50301.1 - 2.9e-32 110.4 5.1 3.4e-32 110.2 2.8 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 BAJ50301.1 - 3e-29 102.0 0.0 3.4e-26 92.0 0.0 2.4 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain IF-2 PF11987.8 BAJ50301.1 - 1.3e-15 57.4 0.3 3.4e-15 56.1 0.3 1.7 1 0 0 1 1 1 1 Translation-initiation factor 2 Intein_splicing PF14890.6 BAJ50301.1 - 1e-11 44.9 0.0 3e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Intein splicing domain GTP_EFTU_D2 PF03144.25 BAJ50301.1 - 1.5e-06 28.4 6.3 0.00026 21.3 0.0 3.4 3 0 0 3 3 3 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAJ50301.1 - 0.0013 18.8 0.0 0.0053 16.8 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 BAJ50301.1 - 0.037 13.8 0.0 0.07 12.9 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Peptidase_M22 PF00814.25 BAJ50302.1 - 3.8e-78 262.9 0.1 4.6e-78 262.6 0.1 1.0 1 0 0 1 1 1 1 Glycoprotease family BcrAD_BadFG PF01869.20 BAJ50302.1 - 0.0024 17.4 0.0 1.5 8.2 0.0 2.1 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family Ketoacyl-synt_C PF02801.22 BAJ50302.1 - 0.09 12.8 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Beta-ketoacyl synthase, C-terminal domain baeRF_family10 PF18854.1 BAJ50302.1 - 0.14 12.4 0.6 7.1 6.9 0.3 2.2 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 10 RIO1 PF01163.22 BAJ50303.1 - 9.1e-09 35.2 0.0 1.3e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 BAJ50303.1 - 1.2e-08 35.2 1.6 3e-05 24.1 0.1 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 BAJ50303.1 - 1.4e-07 31.0 0.0 1.3e-06 27.9 0.0 2.0 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 BAJ50303.1 - 3.7e-07 29.8 0.0 5e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAJ50303.1 - 0.00095 18.5 0.0 0.0016 17.8 0.0 1.5 1 1 0 1 1 1 1 Protein tyrosine kinase DUF4135 PF13575.6 BAJ50303.1 - 0.023 14.0 0.0 0.025 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) APH_6_hur PF04655.14 BAJ50303.1 - 0.085 12.2 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Aminoglycoside/hydroxyurea antibiotic resistance kinase Ham1p_like PF01725.16 BAJ50304.1 - 2.9e-48 164.3 0.0 3.2e-48 164.1 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Ribosomal_S13_N PF08069.12 BAJ50305.1 - 2.1e-28 98.1 0.4 3.5e-28 97.4 0.4 1.4 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 BAJ50305.1 - 1e-11 44.9 0.4 1.4e-11 44.4 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 NUDIX_2 PF13869.6 BAJ50305.1 - 0.022 14.3 0.1 0.088 12.4 0.1 1.8 1 1 1 2 2 2 0 Nucleotide hydrolase DHHA1 PF02272.19 BAJ50306.1 - 4.6e-16 59.5 0.2 1.5e-15 57.9 0.2 2.0 1 0 0 1 1 1 1 DHHA1 domain VitK2_biosynth PF02621.14 BAJ50306.1 - 0.079 12.5 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Menaquinone biosynthesis Pcc1 PF09341.10 BAJ50307.1 - 0.036 14.2 0.1 0.045 13.9 0.1 1.3 1 1 0 1 1 1 0 Transcription factor Pcc1 DUF3501 PF12007.8 BAJ50307.1 - 0.13 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3501) Ribosomal_S3Ae PF01015.18 BAJ50308.1 - 5.2e-56 189.4 0.5 6.5e-56 189.1 0.5 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family DUF2095 PF09868.9 BAJ50309.1 - 2.8e-25 88.8 0.9 3.6e-25 88.4 0.9 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2095) FtsK_SpoIIIE PF01580.18 BAJ50309.1 - 0.033 13.5 0.3 0.036 13.4 0.3 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family SHOCT PF09851.9 BAJ50309.1 - 1.4 8.8 4.6 3.8 7.4 0.0 2.7 3 0 0 3 3 3 0 Short C-terminal domain MMR_HSR1_C PF08438.10 BAJ50310.1 - 2.6e-33 114.9 0.1 4.2e-33 114.3 0.1 1.3 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 BAJ50310.1 - 1.7e-20 73.2 0.0 8.5e-20 71.0 0.0 2.2 1 1 1 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAJ50310.1 - 1.9e-08 34.0 0.7 5.9e-07 29.1 0.2 2.7 3 0 0 3 3 3 1 Ferrous iron transport protein B TGS PF02824.21 BAJ50310.1 - 3.8e-08 33.3 0.0 7.7e-08 32.3 0.0 1.5 1 0 0 1 1 1 1 TGS domain GTP_EFTU PF00009.27 BAJ50310.1 - 0.008 15.7 0.1 4.1 6.9 0.0 2.7 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain ATP_bind_1 PF03029.17 BAJ50310.1 - 0.0095 15.7 0.0 0.75 9.5 0.0 2.6 3 0 0 3 3 3 1 Conserved hypothetical ATP binding protein CoA_binding_2 PF13380.6 BAJ50310.1 - 0.11 13.0 0.2 0.32 11.5 0.0 1.9 2 0 0 2 2 2 0 CoA binding domain AAA_18 PF13238.6 BAJ50310.1 - 0.16 12.6 0.0 0.45 11.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain YARHG PF13308.6 BAJ50310.1 - 0.2 11.6 0.0 0.37 10.7 0.0 1.4 1 0 0 1 1 1 0 YARHG domain RsgA_GTPase PF03193.16 BAJ50310.1 - 0.21 11.4 0.4 21 5.0 0.0 2.5 3 0 0 3 3 3 0 RsgA GTPase Ribosomal_L15e PF00827.17 BAJ50311.1 - 2.3e-43 148.2 3.5 2.5e-43 148.0 3.5 1.0 1 0 0 1 1 1 1 Ribosomal L15 GGDEF_2 PF17853.1 BAJ50311.1 - 0.041 14.1 0.1 0.068 13.4 0.0 1.5 2 0 0 2 2 2 0 GGDEF-like domain RNA_binding PF01877.17 BAJ50312.1 - 4.7e-24 85.0 0.0 5.5e-24 84.7 0.0 1.1 1 0 0 1 1 1 1 RNA binding RNase_P_Rpp14 PF01900.19 BAJ50314.1 - 1.9e-06 28.1 0.1 5.4e-06 26.6 0.1 1.7 1 1 0 1 1 1 1 Rpp14/Pop5 family CPBP PF02517.16 BAJ50315.1 - 7.1e-14 51.9 0.4 7.1e-14 51.9 0.4 2.8 1 1 0 2 2 2 1 CPBP intramembrane metalloprotease TatC PF00902.18 BAJ50316.1 - 7e-38 130.5 22.5 8.7e-38 130.2 22.5 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) zinc_ribbon_2 PF13240.6 BAJ50316.1 - 0.00013 21.6 5.3 0.00021 20.9 5.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 BAJ50316.1 - 0.012 16.3 0.2 0.024 15.4 0.2 1.5 1 0 0 1 1 1 0 zinc-ribbon family DZR PF12773.7 BAJ50316.1 - 0.097 12.7 2.1 0.15 12.1 2.1 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 BAJ50316.1 - 0.12 11.8 2.3 0.21 11.1 2.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain RecR PF02132.15 BAJ50316.1 - 4.9 6.8 4.8 58 3.4 3.6 2.7 2 1 0 2 2 2 0 RecR protein DUF4006 PF13179.6 BAJ50316.1 - 9.2 6.3 6.2 1.6 8.7 1.1 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF4006) MttA_Hcf106 PF02416.16 BAJ50317.1 - 9e-15 53.7 1.1 1.2e-13 50.2 0.6 2.1 2 0 0 2 2 2 1 mttA/Hcf106 family GrpE PF01025.19 BAJ50317.1 - 0.024 14.3 0.5 0.028 14.1 0.5 1.1 1 0 0 1 1 1 0 GrpE OapA_N PF08525.11 BAJ50317.1 - 1.6 8.8 4.7 2.6 8.1 4.6 1.4 1 1 0 1 1 1 0 Opacity-associated protein A N-terminal motif adh_short_C2 PF13561.6 BAJ50318.1 - 1.2e-49 169.0 0.3 1.4e-49 168.8 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 BAJ50318.1 - 6.9e-35 120.3 0.1 8.1e-35 120.0 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 BAJ50318.1 - 1e-11 45.1 0.1 1.5e-11 44.6 0.1 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 BAJ50318.1 - 0.0001 21.9 0.3 0.00034 20.2 0.3 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 BAJ50318.1 - 0.015 15.2 0.1 0.025 14.5 0.1 1.5 1 0 0 1 1 1 0 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 BAJ50318.1 - 0.018 14.4 0.0 0.024 14.1 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase NmrA PF05368.13 BAJ50318.1 - 0.033 13.7 0.1 0.29 10.6 0.1 2.0 2 0 0 2 2 2 0 NmrA-like family RmlD_sub_bind PF04321.17 BAJ50318.1 - 0.077 12.1 0.0 0.14 11.2 0.0 1.4 1 0 0 1 1 1 0 RmlD substrate binding domain Ribosomal_S13 PF00416.22 BAJ50319.1 - 2.2e-38 131.5 0.1 2.6e-38 131.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 U-box PF04564.15 BAJ50319.1 - 0.077 13.2 0.0 0.21 11.8 0.0 1.7 2 0 0 2 2 2 0 U-box domain DUF3944 PF13099.6 BAJ50319.1 - 0.2 11.6 0.2 0.41 10.6 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3944) Meth_synt_2 PF01717.18 BAJ50320.1 - 4.9e-17 62.2 0.0 3.9e-16 59.2 0.0 2.3 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 BAJ50320.1 - 0.00034 20.2 0.0 0.00054 19.6 0.0 1.2 1 0 0 1 1 1 1 Cobalamin-independent synthase, N-terminal domain Meth_synt_1 PF08267.12 BAJ50321.1 - 1.1e-17 64.5 0.0 2.1e-17 63.6 0.0 1.4 1 1 0 1 1 1 1 Cobalamin-independent synthase, N-terminal domain Meth_synt_2 PF01717.18 BAJ50321.1 - 1.7e-13 50.5 0.0 2.1e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Pyr_redox_2 PF07992.14 BAJ50322.1 - 3.2e-33 115.2 0.0 4.1e-33 114.9 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 BAJ50322.1 - 3.5e-24 85.6 0.0 3.8e-21 75.6 0.0 2.0 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 BAJ50322.1 - 3.4e-14 53.2 0.3 8e-10 39.1 0.1 3.4 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 BAJ50322.1 - 4.6e-07 29.3 0.0 9.9e-05 21.6 0.0 2.8 2 1 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 BAJ50322.1 - 1.4e-06 28.2 1.2 0.028 14.0 0.1 2.8 2 1 1 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.14 BAJ50322.1 - 2e-06 26.8 0.0 0.0024 16.6 0.1 3.0 3 0 0 3 3 3 2 HI0933-like protein FAD_binding_2 PF00890.24 BAJ50322.1 - 1.6e-05 24.2 0.1 0.75 8.8 0.0 3.8 4 0 0 4 4 4 2 FAD binding domain Thi4 PF01946.17 BAJ50322.1 - 1.8e-05 24.1 0.0 0.00017 20.9 0.0 2.2 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 BAJ50322.1 - 0.0001 22.5 0.0 0.00025 21.2 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FMO-like PF00743.19 BAJ50322.1 - 0.00055 18.5 0.0 0.00085 17.9 0.0 1.2 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like FAD_oxidored PF12831.7 BAJ50322.1 - 0.00085 18.8 0.0 0.0039 16.6 0.0 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 BAJ50322.1 - 0.04 14.4 0.0 0.093 13.2 0.0 1.8 1 0 0 1 1 1 0 Putative NAD(P)-binding IlvN PF07991.12 BAJ50322.1 - 0.053 13.1 0.0 0.17 11.5 0.0 1.8 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain GIDA PF01134.22 BAJ50322.1 - 0.055 12.5 0.0 1.3 8.1 0.0 2.6 3 0 0 3 3 3 0 Glucose inhibited division protein A FAD_binding_3 PF01494.19 BAJ50322.1 - 0.11 11.7 0.2 1 8.5 0.0 2.5 3 0 0 3 3 3 0 FAD binding domain NAD_binding_9 PF13454.6 BAJ50322.1 - 0.11 12.5 0.1 29 4.6 0.0 3.1 4 0 0 4 4 4 0 FAD-NAD(P)-binding PhoU PF01895.19 BAJ50323.1 - 1.8e-10 41.1 1.2 8.9e-10 38.9 0.8 2.2 2 0 0 2 2 2 1 PhoU domain MazE_antitoxin PF04014.18 BAJ50323.1 - 2.5e-10 40.1 0.0 5.7e-10 38.9 0.0 1.7 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin TOBE_3 PF12857.7 BAJ50323.1 - 0.01 15.7 0.2 0.081 12.8 0.0 2.4 2 0 0 2 2 2 0 TOBE-like domain YPEB PF14620.6 BAJ50323.1 - 0.12 11.7 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 YpeB sporulation Ribosomal_L22 PF00237.19 BAJ50324.1 - 2.4e-23 82.3 0.1 3e-23 82.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.20 BAJ50325.1 - 1.6e-21 76.6 0.2 3e-21 75.7 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 BAJ50325.1 - 5.1e-12 45.4 0.1 1.1e-11 44.4 0.1 1.6 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 BAJ50325.1 - 0.009 15.8 0.1 0.045 13.6 0.0 2.1 2 0 0 2 2 2 1 KH domain Tautomerase PF01361.21 BAJ50325.1 - 0.01 15.8 0.1 0.021 14.7 0.1 1.5 1 0 0 1 1 1 1 Tautomerase enzyme Ribosomal_L29 PF00831.23 BAJ50326.1 - 3.4e-15 55.7 4.2 4.3e-15 55.4 4.2 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein DUF1192 PF06698.11 BAJ50326.1 - 0.0011 18.9 8.4 0.017 15.2 0.7 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF1192) DUF2482 PF10655.9 BAJ50326.1 - 0.054 14.0 0.7 0.09 13.3 0.7 1.4 1 0 0 1 1 1 0 Hypothetical protein of unknown function (DUF2482) HBB PF06777.11 BAJ50326.1 - 0.063 13.0 1.8 0.064 12.9 1.8 1.0 1 0 0 1 1 1 0 Helical and beta-bridge domain Takusan PF04822.13 BAJ50326.1 - 0.099 12.5 2.7 0.19 11.6 2.7 1.4 1 0 0 1 1 1 0 Takusan DUF1811 PF08838.10 BAJ50326.1 - 0.13 12.5 2.8 0.21 11.8 2.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1811) VPS11_C PF12451.8 BAJ50326.1 - 4.4 7.6 5.7 16 5.8 5.7 2.0 1 1 0 1 1 1 0 Vacuolar protein sorting protein 11 C terminal UPF0086 PF01868.16 BAJ50327.1 - 2.5e-07 30.5 0.3 2.9e-07 30.3 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_S17 PF00366.20 BAJ50328.1 - 1e-26 92.8 2.3 1.3e-26 92.4 2.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 BAJ50328.1 - 0.054 13.9 0.8 0.1 13.0 0.0 1.8 2 0 0 2 2 2 0 Ribosomal_S17 N-terminal zf-C3H1 PF10650.9 BAJ50328.1 - 0.46 10.3 3.2 0.94 9.3 3.2 1.4 1 0 0 1 1 1 0 Putative zinc-finger domain Ribosomal_L14 PF00238.19 BAJ50329.1 - 4.3e-32 110.7 0.2 5.2e-32 110.5 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e DUF1952 PF09189.10 BAJ50329.1 - 0.07 13.0 0.8 1 9.3 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1952) Ribosomal_L26 PF16906.5 BAJ50330.1 - 9.7e-27 93.3 0.8 1.2e-26 92.9 0.8 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 BAJ50330.1 - 3.5e-06 26.8 2.9 5.8e-06 26.1 2.9 1.4 1 0 0 1 1 1 1 KOW motif LAL_C2 PF18603.1 BAJ50330.1 - 0.08 13.1 0.2 0.22 11.7 0.1 1.7 1 1 1 2 2 2 0 L-amino acid ligase C-terminal domain 2 Mitoc_L55 PF09776.9 BAJ50330.1 - 0.094 12.5 0.6 0.25 11.1 0.1 1.9 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L55 Ribosomal_S4e PF00900.20 BAJ50331.1 - 1.5e-20 72.9 0.0 2.8e-20 72.0 0.0 1.5 1 0 0 1 1 1 1 Ribosomal family S4e S4 PF01479.25 BAJ50331.1 - 7.5e-10 38.4 0.0 1.5e-09 37.4 0.0 1.5 1 0 0 1 1 1 1 S4 domain RS4NT PF08071.12 BAJ50331.1 - 2e-08 34.2 5.2 3.9e-08 33.3 5.2 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain Ribosomal_L5_C PF00673.21 BAJ50332.1 - 1.3e-20 73.4 0.0 3.2e-20 72.1 0.0 1.8 2 1 0 2 2 2 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 BAJ50332.1 - 1.1e-17 64.1 0.2 3.2e-17 62.6 0.1 1.8 2 0 0 2 2 2 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 BAJ50333.1 - 8.3e-09 35.1 1.6 9.1e-09 34.9 1.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-RRN7 PF11781.8 BAJ50333.1 - 0.0064 16.1 7.1 0.39 10.4 0.3 2.2 2 0 0 2 2 2 2 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Zn_Tnp_IS1595 PF12760.7 BAJ50333.1 - 0.017 15.1 2.2 0.02 14.8 2.2 1.1 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DZR PF12773.7 BAJ50333.1 - 0.022 14.8 0.1 0.026 14.5 0.1 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-C4_ClpX PF06689.13 BAJ50333.1 - 0.051 13.5 3.7 0.4 10.6 0.6 2.1 1 1 1 2 2 2 0 ClpX C4-type zinc finger C1_2 PF03107.16 BAJ50333.1 - 0.054 13.8 0.3 0.061 13.6 0.3 1.1 1 0 0 1 1 1 0 C1 domain zf-FPG_IleRS PF06827.14 BAJ50333.1 - 0.063 13.2 5.9 0.14 12.0 5.9 1.6 1 1 0 1 1 1 0 Zinc finger found in FPG and IleRS zf_UBZ PF18439.1 BAJ50333.1 - 0.074 12.7 0.4 6.7 6.4 0.0 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger DUF3268 PF11672.8 BAJ50333.1 - 0.094 13.0 2.2 0.2 12.0 0.9 1.8 1 1 1 2 2 2 0 zinc-finger-containing domain Zn_ribbon_SprT PF17283.2 BAJ50333.1 - 0.13 12.1 6.8 0.85 9.6 6.5 2.0 1 1 1 2 2 2 0 SprT-like zinc ribbon domain SR1P PF13790.6 BAJ50333.1 - 0.15 12.2 2.5 4.2 7.6 0.3 2.1 2 0 0 2 2 2 0 SR1 protein DUF2757 PF10955.8 BAJ50333.1 - 0.21 11.8 3.7 1.9 8.8 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2757) DUF1451 PF07295.11 BAJ50333.1 - 0.25 11.4 0.3 0.3 11.1 0.3 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain OrsD PF12013.8 BAJ50333.1 - 0.34 11.4 3.3 7.1 7.1 0.2 2.1 1 1 1 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D zf-CCHC_2 PF13696.6 BAJ50333.1 - 0.4 10.6 8.6 2.9 7.8 0.3 2.3 2 0 0 2 2 2 0 Zinc knuckle DUF2688 PF10892.8 BAJ50333.1 - 1.5 8.4 8.0 0.19 11.2 1.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2688) DUF1660 PF07874.11 BAJ50333.1 - 4.5 7.8 6.0 16 6.1 0.4 2.0 1 1 1 2 2 2 0 Prophage protein (DUF1660) Ribosomal_S8 PF00410.19 BAJ50334.1 - 2.7e-23 82.3 0.0 3.6e-23 81.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.23 BAJ50335.1 - 8.5e-19 68.0 10.2 3.5e-09 37.2 2.9 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 FecR PF04773.13 BAJ50335.1 - 0.0048 17.5 0.3 0.0048 17.5 0.3 1.8 2 0 0 2 2 2 1 FecR protein YbbR PF07949.12 BAJ50335.1 - 0.23 11.8 7.6 0.89 9.9 2.2 3.2 2 2 1 3 3 3 0 YbbR-like protein Ribosomal_L32e PF01655.18 BAJ50336.1 - 3.2e-34 117.6 0.0 3.8e-34 117.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L19e PF01280.20 BAJ50337.1 - 3.3e-47 160.2 3.1 3.9e-47 159.9 3.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L19e CtsR_C PF17727.1 BAJ50337.1 - 0.016 15.3 0.2 0.14 12.3 0.0 2.1 2 0 0 2 2 2 0 CtsR C-terminal dimerization domain HTH_Crp_2 PF13545.6 BAJ50337.1 - 0.11 12.4 0.5 0.81 9.7 0.1 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Ribosomal_L5e PF17144.4 BAJ50338.1 - 8.4e-27 94.2 1.6 2.3e-18 66.7 0.7 2.3 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18p PF00861.22 BAJ50338.1 - 0.00027 21.3 0.8 0.00039 20.8 0.8 1.3 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_S5 PF00333.20 BAJ50339.1 - 4.2e-26 90.7 1.2 7.3e-26 89.9 1.2 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 BAJ50339.1 - 2.3e-20 71.8 0.1 5e-20 70.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.20 BAJ50340.1 - 5.4e-11 42.2 0.6 8.5e-11 41.6 0.1 1.7 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e PCRF PF03462.18 BAJ50340.1 - 0.085 12.7 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 PCRF domain Ribosomal_L27A PF00828.19 BAJ50341.1 - 2.7e-17 63.6 1.3 2.7e-17 63.6 1.3 1.5 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SecY PF00344.20 BAJ50342.1 - 2.7e-65 220.6 23.0 3.3e-65 220.3 23.0 1.1 1 0 0 1 1 1 1 SecY translocase Popeye PF04831.13 BAJ50342.1 - 0.081 13.1 0.4 21 5.3 0.3 2.8 3 1 0 3 3 3 0 Popeye protein conserved region EMC3_TMCO1 PF01956.16 BAJ50343.1 - 2e-11 43.9 3.5 3.9e-11 43.0 3.5 1.5 1 1 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like ATP-synt_G PF04718.15 BAJ50343.1 - 0.0063 17.3 0.2 0.0098 16.7 0.2 1.3 1 0 0 1 1 1 1 Mitochondrial ATP synthase g subunit Cytidylate_kin2 PF13189.6 BAJ50344.1 - 4.6e-15 56.2 2.3 8.4e-14 52.1 2.3 2.0 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 BAJ50344.1 - 4e-12 46.8 0.0 7.8e-12 45.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 BAJ50344.1 - 1.9e-09 37.6 1.9 0.0005 19.9 0.1 2.2 2 0 0 2 2 2 2 Cytidylate kinase SKI PF01202.22 BAJ50344.1 - 4.7e-07 30.1 0.3 0.0053 16.9 0.1 2.3 2 0 0 2 2 2 2 Shikimate kinase AAA_17 PF13207.6 BAJ50344.1 - 9.2e-06 26.1 0.0 1.9e-05 25.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 BAJ50344.1 - 0.015 15.4 1.6 0.21 11.8 1.6 2.4 1 1 1 2 2 2 0 AAA domain dNK PF01712.19 BAJ50344.1 - 0.028 14.3 0.4 0.14 12.0 0.1 2.0 2 0 0 2 2 2 0 Deoxynucleoside kinase LacI PF00356.21 BAJ50344.1 - 0.033 14.0 0.4 9.1 6.2 0.0 2.6 2 1 0 2 2 2 0 Bacterial regulatory proteins, lacI family Amidohydro_2 PF04909.14 BAJ50344.1 - 0.074 12.8 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Amidohydrolase KOW PF00467.29 BAJ50345.1 - 0.00071 19.4 7.5 0.0011 18.9 7.5 1.3 1 0 0 1 1 1 1 KOW motif Ribosomal_L14e PF01929.17 BAJ50345.1 - 0.0018 18.7 0.1 0.0023 18.4 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L14 TruB_C_2 PF16198.5 BAJ50346.1 - 1.5e-20 73.1 0.1 2.5e-20 72.4 0.1 1.4 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 BAJ50346.1 - 6e-17 61.4 2.0 1e-16 60.6 2.0 1.4 1 0 0 1 1 1 1 PUA domain TruB_N PF01509.18 BAJ50346.1 - 2.2e-05 24.9 0.0 0.0018 18.7 0.0 2.4 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) UPF0113 PF03657.13 BAJ50346.1 - 0.003 17.8 0.1 0.0079 16.4 0.0 1.7 2 0 0 2 2 2 1 UPF0113 PUA domain CBS PF00571.28 BAJ50347.1 - 3e-29 101.2 4.2 1.8e-16 60.3 0.3 2.0 2 0 0 2 2 2 2 CBS domain IF3_N PF05198.16 BAJ50347.1 - 0.0013 18.9 1.0 0.22 11.8 0.1 2.5 2 1 0 2 2 2 2 Translation initiation factor IF-3, N-terminal domain Acetyltransf_10 PF13673.7 BAJ50347.1 - 0.1 12.5 0.0 10 6.1 0.0 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain ABC_tran PF00005.27 BAJ50348.1 - 1.2e-29 103.6 0.0 1.7e-29 103.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 BAJ50348.1 - 1.7e-22 79.7 0.3 2.9e-22 78.9 0.3 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 BAJ50348.1 - 0.0066 16.7 0.3 0.029 14.6 0.3 1.9 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 BAJ50348.1 - 0.012 15.0 0.0 0.4 10.1 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein AAA_29 PF13555.6 BAJ50348.1 - 0.014 15.1 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 BAJ50348.1 - 0.051 13.0 0.1 3 7.2 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 BAJ50348.1 - 0.063 12.8 0.3 0.58 9.7 0.1 2.2 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 BAJ50348.1 - 0.084 13.2 0.2 0.14 12.6 0.2 1.6 1 1 0 1 1 1 0 AAA ATPase domain ATPase PF06745.13 BAJ50348.1 - 0.15 11.4 0.1 0.29 10.5 0.1 1.4 1 0 0 1 1 1 0 KaiC CwsA PF10814.8 BAJ50349.1 - 0.027 14.7 0.6 0.038 14.2 0.6 1.2 1 0 0 1 1 1 0 Cell wall synthesis protein CwsA PPC PF04151.15 BAJ50349.1 - 0.067 14.3 0.0 0.21 12.7 0.0 1.9 2 0 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain BNR_2 PF13088.6 BAJ50351.1 - 5.6e-13 48.8 0.2 3.4e-10 39.7 0.0 2.9 2 1 0 2 2 2 2 BNR repeat-like domain BNR PF02012.20 BAJ50351.1 - 1.7e-06 27.1 26.6 0.18 11.9 0.4 6.4 6 0 0 6 6 6 4 BNR/Asp-box repeat BNR_4 PF15892.5 BAJ50351.1 - 0.00018 21.0 0.1 0.0018 17.7 0.1 2.1 2 0 0 2 2 2 1 BNR repeat-containing family member TIG PF01833.24 BAJ50351.1 - 0.012 15.6 0.1 0.042 13.9 0.1 1.9 1 0 0 1 1 1 0 IPT/TIG domain Sortilin-Vps10 PF15902.5 BAJ50351.1 - 0.18 10.6 4.3 4.2 6.1 1.6 3.6 3 1 0 3 3 3 0 Sortilin, neurotensin receptor 3, FAST_1 PF06743.15 BAJ50351.1 - 0.2 11.7 0.0 0.4 10.7 0.0 1.5 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 1 SBP_bac_5 PF00496.22 BAJ50352.1 - 6.6e-29 101.0 2.3 1.5e-24 86.7 0.0 3.0 3 0 0 3 3 3 3 Bacterial extracellular solute-binding proteins, family 5 Middle ATG16 PF08614.11 BAJ50353.1 - 6.1e-05 23.3 9.5 9.8e-05 22.7 9.5 1.3 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF2203 PF09969.9 BAJ50353.1 - 0.00014 22.6 0.4 0.00026 21.7 0.4 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2203) IFT57 PF10498.9 BAJ50353.1 - 0.00017 20.7 6.8 0.00026 20.1 6.8 1.2 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF677 PF05055.12 BAJ50353.1 - 0.00017 20.6 0.3 0.00027 20.0 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF677) Atg14 PF10186.9 BAJ50353.1 - 0.00022 20.4 6.2 0.0003 20.0 6.2 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 GAS PF13851.6 BAJ50353.1 - 0.00023 20.6 11.9 0.00052 19.4 11.9 1.5 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding FPP PF05911.11 BAJ50353.1 - 0.00029 19.2 11.9 0.00039 18.8 11.9 1.0 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil Fez1 PF06818.15 BAJ50353.1 - 0.00035 21.1 5.0 0.00049 20.6 5.0 1.2 1 0 0 1 1 1 1 Fez1 FlaC_arch PF05377.11 BAJ50353.1 - 0.00048 20.5 9.5 0.038 14.4 2.5 3.0 1 1 2 3 3 3 2 Flagella accessory protein C (FlaC) FapA PF03961.13 BAJ50353.1 - 0.00053 18.7 0.7 0.00067 18.4 0.7 1.1 1 0 0 1 1 1 1 Flagellar Assembly Protein A DUF4472 PF14739.6 BAJ50353.1 - 0.00063 20.4 7.4 0.0011 19.7 7.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4472) Laminin_II PF06009.12 BAJ50353.1 - 0.00064 19.8 7.2 0.0012 18.8 7.2 1.4 1 0 0 1 1 1 1 Laminin Domain II DUF812 PF05667.11 BAJ50353.1 - 0.00068 18.7 4.8 0.00091 18.2 4.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Nup88 PF10168.9 BAJ50353.1 - 0.00086 17.2 2.9 0.0011 16.9 2.9 1.1 1 0 0 1 1 1 1 Nuclear pore component Baculo_PEP_C PF04513.12 BAJ50353.1 - 0.0012 18.9 10.6 0.0012 18.9 10.6 1.9 2 0 0 2 2 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus Exonuc_VII_L PF02601.15 BAJ50353.1 - 0.0013 18.4 1.6 0.0016 18.0 1.6 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit TolA_bind_tri PF16331.5 BAJ50353.1 - 0.0013 18.7 12.0 0.77 9.9 2.1 2.5 1 1 1 2 2 2 2 TolA binding protein trimerisation Nup54 PF13874.6 BAJ50353.1 - 0.0015 18.7 8.6 0.003 17.7 8.5 1.6 1 1 0 1 1 1 1 Nucleoporin complex subunit 54 HemX PF04375.14 BAJ50353.1 - 0.0015 17.9 3.3 0.0025 17.2 3.3 1.4 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase Phlebovirus_NSM PF07246.11 BAJ50353.1 - 0.0015 17.9 3.0 0.0024 17.3 3.0 1.2 1 0 0 1 1 1 1 Phlebovirus nonstructural protein NS-M Filament PF00038.21 BAJ50353.1 - 0.0016 18.1 6.1 0.0025 17.4 6.1 1.3 1 0 0 1 1 1 1 Intermediate filament protein FliJ PF02050.16 BAJ50353.1 - 0.0016 18.6 4.8 0.0033 17.6 4.8 1.5 1 0 0 1 1 1 1 Flagellar FliJ protein Tropomyosin PF00261.20 BAJ50353.1 - 0.0017 17.8 8.8 0.0025 17.2 7.5 1.6 1 1 0 1 1 1 1 Tropomyosin TPR_MLP1_2 PF07926.12 BAJ50353.1 - 0.0017 18.4 11.4 0.0036 17.4 11.4 1.6 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein DUF745 PF05335.13 BAJ50353.1 - 0.002 17.9 4.4 0.0032 17.2 4.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF745) Tektin PF03148.14 BAJ50353.1 - 0.002 17.0 8.2 0.0027 16.5 8.2 1.1 1 0 0 1 1 1 1 Tektin family HAUS6_N PF14661.6 BAJ50353.1 - 0.002 17.8 3.0 0.002 17.8 3.0 1.5 2 0 0 2 2 1 1 HAUS augmin-like complex subunit 6 N-terminus Rootletin PF15035.6 BAJ50353.1 - 0.0021 18.1 2.7 0.0038 17.3 2.7 1.4 1 0 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion Spc7 PF08317.11 BAJ50353.1 - 0.0023 16.9 10.1 0.0036 16.2 10.1 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein AAA_13 PF13166.6 BAJ50353.1 - 0.0024 16.6 0.7 0.0033 16.2 0.7 1.3 1 0 0 1 1 1 1 AAA domain MscS_porin PF12795.7 BAJ50353.1 - 0.0024 17.4 16.2 0.033 13.8 17.6 1.9 2 0 0 2 2 2 1 Mechanosensitive ion channel porin domain HAUS-augmin3 PF14932.6 BAJ50353.1 - 0.0027 17.3 5.9 0.0039 16.8 5.9 1.2 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 PTRF_SDPR PF15237.6 BAJ50353.1 - 0.0028 17.3 5.5 0.0041 16.8 5.5 1.1 1 0 0 1 1 1 1 PTRF/SDPR family Vps5 PF09325.10 BAJ50353.1 - 0.0028 17.3 0.4 0.0048 16.5 0.4 1.4 1 0 0 1 1 1 1 Vps5 C terminal like Gp58 PF07902.11 BAJ50353.1 - 0.0029 16.0 4.5 0.0039 15.6 4.5 1.1 1 0 0 1 1 1 1 gp58-like protein Macoilin PF09726.9 BAJ50353.1 - 0.003 16.2 4.9 0.0038 15.9 4.9 1.0 1 0 0 1 1 1 1 Macoilin family PRKG1_interact PF15898.5 BAJ50353.1 - 0.0032 18.3 10.9 0.0053 17.6 10.9 1.3 1 0 0 1 1 1 1 cGMP-dependent protein kinase interacting domain CASP_C PF08172.12 BAJ50353.1 - 0.0032 16.8 6.4 0.21 10.9 0.2 2.2 1 1 1 2 2 2 1 CASP C terminal Rx_N PF18052.1 BAJ50353.1 - 0.0035 17.6 5.9 0.093 13.0 2.6 2.5 1 1 1 2 2 2 1 Rx N-terminal domain UPF0242 PF06785.11 BAJ50353.1 - 0.0038 17.4 2.7 0.0063 16.6 2.7 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 BAJ50353.1 - 0.0042 17.6 10.4 0.011 16.3 10.4 1.6 1 0 0 1 1 1 1 Apg6 coiled-coil region EzrA PF06160.12 BAJ50353.1 - 0.0044 15.3 4.3 0.0068 14.6 4.3 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA DUF1664 PF07889.12 BAJ50353.1 - 0.005 16.9 5.0 0.018 15.0 5.0 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) CLZ PF16526.5 BAJ50353.1 - 0.0057 17.0 11.3 0.62 10.5 6.2 3.0 1 1 2 3 3 3 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels TMPIT PF07851.13 BAJ50353.1 - 0.006 15.9 2.8 0.0092 15.3 2.8 1.3 1 0 0 1 1 1 1 TMPIT-like protein DUF3584 PF12128.8 BAJ50353.1 - 0.0078 13.8 7.1 0.01 13.4 7.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) LPP PF04728.13 BAJ50353.1 - 0.008 16.6 7.2 0.31 11.4 0.6 3.2 2 1 1 3 3 2 1 Lipoprotein leucine-zipper T3SSipB PF16535.5 BAJ50353.1 - 0.008 16.7 2.3 0.013 16.0 2.3 1.3 1 0 0 1 1 1 1 Type III cell invasion protein SipB Fib_alpha PF08702.10 BAJ50353.1 - 0.011 16.0 8.0 0.024 14.8 8.0 1.5 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family CALCOCO1 PF07888.11 BAJ50353.1 - 0.012 14.6 9.9 0.016 14.1 9.9 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like bZIP_1 PF00170.21 BAJ50353.1 - 0.012 15.7 12.2 0.14 12.2 3.6 2.5 3 0 0 3 3 2 0 bZIP transcription factor DUF2968 PF11180.8 BAJ50353.1 - 0.012 15.2 6.4 0.018 14.7 6.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) TTKRSYEDQ PF10212.9 BAJ50353.1 - 0.013 14.6 3.4 0.018 14.0 3.4 1.2 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein HMMR_N PF15905.5 BAJ50353.1 - 0.013 15.0 9.0 0.021 14.3 9.0 1.3 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Golgin_A5 PF09787.9 BAJ50353.1 - 0.014 14.9 8.6 0.021 14.3 8.6 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 MAD PF05557.13 BAJ50353.1 - 0.014 13.8 6.8 0.02 13.3 6.8 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein DUF4446 PF14584.6 BAJ50353.1 - 0.015 15.3 2.4 0.033 14.2 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF4200 PF13863.6 BAJ50353.1 - 0.017 15.5 5.2 0.028 14.8 5.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) OmpH PF03938.14 BAJ50353.1 - 0.024 14.9 3.6 0.049 14.0 3.6 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) ADIP PF11559.8 BAJ50353.1 - 0.026 14.6 12.3 0.04 14.0 11.5 1.6 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF2730 PF10805.8 BAJ50353.1 - 0.027 14.5 7.6 0.05 13.7 4.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Uso1_p115_C PF04871.13 BAJ50353.1 - 0.028 14.8 10.5 0.048 14.0 10.5 1.4 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Vps51 PF08700.11 BAJ50353.1 - 0.028 14.5 5.7 0.71 10.0 1.3 2.6 1 1 0 2 2 2 0 Vps51/Vps67 CENP-F_leu_zip PF10473.9 BAJ50353.1 - 0.031 14.3 13.5 0.29 11.2 12.7 2.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 dCache_1 PF02743.18 BAJ50353.1 - 0.031 14.0 1.2 0.05 13.4 1.2 1.3 1 0 0 1 1 1 0 Cache domain DUF724 PF05266.14 BAJ50353.1 - 0.038 13.8 5.5 0.059 13.2 5.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) V_ATPase_I PF01496.19 BAJ50353.1 - 0.038 11.9 2.3 0.055 11.4 2.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RskA PF10099.9 BAJ50353.1 - 0.04 14.2 0.1 0.059 13.7 0.1 1.3 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF16 PF01519.16 BAJ50353.1 - 0.04 14.4 7.7 0.14 12.7 7.7 1.9 1 1 0 1 1 1 0 Protein of unknown function DUF16 DUF3568 PF12092.8 BAJ50353.1 - 0.058 13.5 2.7 0.091 12.8 1.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3568) DUF3450 PF11932.8 BAJ50353.1 - 0.064 12.6 11.6 0.24 10.7 8.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) XhlA PF10779.9 BAJ50353.1 - 0.069 13.4 6.6 0.2 11.9 2.0 2.7 1 1 1 2 2 2 0 Haemolysin XhlA AI-2E_transport PF01594.16 BAJ50353.1 - 0.07 12.3 0.2 0.13 11.4 0.2 1.5 1 0 0 1 1 1 0 AI-2E family transporter Tropomyosin_1 PF12718.7 BAJ50353.1 - 0.071 13.3 10.1 0.086 13.0 8.8 1.6 1 1 0 1 1 1 0 Tropomyosin like DUF641 PF04859.12 BAJ50353.1 - 0.076 13.3 7.0 0.57 10.5 7.0 2.2 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) PI3K_P85_iSH2 PF16454.5 BAJ50353.1 - 0.082 12.5 5.4 0.24 11.0 5.4 1.8 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain LXG PF04740.12 BAJ50353.1 - 0.083 12.6 4.4 0.15 11.7 4.4 1.4 1 0 0 1 1 1 0 LXG domain of WXG superfamily LMBR1 PF04791.16 BAJ50353.1 - 0.085 11.7 0.1 0.1 11.5 0.1 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein CENP-H PF05837.12 BAJ50353.1 - 0.088 13.2 9.6 0.19 12.2 9.6 1.5 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Csm1_N PF18504.1 BAJ50353.1 - 0.093 13.1 12.9 0.18 12.2 6.1 2.6 2 1 1 3 3 2 0 Csm1 N-terminal domain TMF_DNA_bd PF12329.8 BAJ50353.1 - 0.1 12.6 15.5 0.031 14.3 8.3 2.7 2 1 1 3 3 2 0 TATA element modulatory factor 1 DNA binding COG2 PF06148.11 BAJ50353.1 - 0.1 12.7 5.6 1.1 9.4 5.6 2.2 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Spc24 PF08286.11 BAJ50353.1 - 0.11 12.7 12.8 0.65 10.3 4.4 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF948 PF06103.11 BAJ50353.1 - 0.11 12.7 8.2 3.5 8.0 8.3 2.8 2 1 0 2 2 1 0 Bacterial protein of unknown function (DUF948) ABC_tran_CTD PF16326.5 BAJ50353.1 - 0.12 12.6 4.0 0.24 11.7 3.6 1.7 1 1 0 1 1 1 0 ABC transporter C-terminal domain GOLGA2L5 PF15070.6 BAJ50353.1 - 0.13 10.9 8.2 0.17 10.5 8.2 1.1 1 0 0 1 1 1 0 Putative golgin subfamily A member 2-like protein 5 WEMBL PF05701.11 BAJ50353.1 - 0.13 10.9 9.7 0.3 9.7 9.8 1.4 1 1 0 1 1 1 0 Weak chloroplast movement under blue light Prefoldin_2 PF01920.20 BAJ50353.1 - 0.13 12.2 10.5 1.6 8.7 2.7 2.6 1 1 2 3 3 3 0 Prefoldin subunit DUF4795 PF16043.5 BAJ50353.1 - 0.14 11.8 8.1 2.6 7.6 8.0 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) HrpB7 PF09486.10 BAJ50353.1 - 0.14 12.5 4.7 1.1 9.7 1.8 2.1 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) Not3 PF04065.15 BAJ50353.1 - 0.14 11.5 4.3 0.23 10.8 4.3 1.3 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component zf-C4H2 PF10146.9 BAJ50353.1 - 0.15 12.4 1.3 0.23 11.7 1.3 1.3 1 0 0 1 1 1 0 Zinc finger-containing protein USP8_interact PF08941.10 BAJ50353.1 - 0.15 11.8 3.5 0.21 11.4 2.4 1.8 1 1 1 2 2 1 0 USP8 interacting DUF4164 PF13747.6 BAJ50353.1 - 0.16 12.3 10.4 5.4 7.4 6.9 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) SPATA1_C PF15743.5 BAJ50353.1 - 0.17 12.0 6.6 0.35 10.9 6.6 1.5 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus Tho2 PF11262.8 BAJ50353.1 - 0.17 11.0 3.3 0.27 10.4 3.3 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 BRE1 PF08647.11 BAJ50353.1 - 0.19 11.8 9.6 0.1 12.6 3.9 2.2 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase Fmp27_WPPW PF10359.9 BAJ50353.1 - 0.19 10.6 3.1 0.26 10.1 3.1 1.2 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Prefoldin PF02996.17 BAJ50353.1 - 0.19 11.6 7.9 3.3 7.7 1.6 2.5 1 1 1 2 2 2 0 Prefoldin subunit Jnk-SapK_ap_N PF09744.9 BAJ50353.1 - 0.2 11.9 8.4 0.38 11.0 8.4 1.5 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF4618 PF15397.6 BAJ50353.1 - 0.2 11.0 7.9 0.55 9.6 2.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) DivIC PF04977.15 BAJ50353.1 - 0.2 11.4 11.1 0.34 10.7 2.6 3.0 1 1 2 3 3 3 0 Septum formation initiator TMCO5 PF14992.6 BAJ50353.1 - 0.21 11.2 9.6 0.3 10.6 9.6 1.1 1 0 0 1 1 1 0 TMCO5 family Prominin PF05478.11 BAJ50353.1 - 0.22 9.5 3.6 0.31 9.0 3.6 1.2 1 0 0 1 1 1 0 Prominin SlyX PF04102.12 BAJ50353.1 - 0.22 12.2 11.1 2.5 8.8 5.6 2.6 1 1 1 2 2 2 0 SlyX CdvA PF18822.1 BAJ50353.1 - 0.22 11.4 6.8 0.81 9.5 0.3 2.4 1 1 1 2 2 2 0 CdvA-like coiled-coil domain HXXSHH PF07586.11 BAJ50353.1 - 0.22 11.0 4.1 0.36 10.4 4.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1552) NPV_P10 PF05531.12 BAJ50353.1 - 0.22 12.0 10.8 0.28 11.6 6.7 2.9 2 1 1 3 3 2 0 Nucleopolyhedrovirus P10 protein Alanine_zipper PF11839.8 BAJ50353.1 - 0.23 11.8 2.7 4.7 7.7 0.8 2.5 1 1 1 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein Bacillus_HBL PF05791.11 BAJ50353.1 - 0.23 11.3 4.7 0.54 10.1 4.7 1.6 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) HOOK PF05622.12 BAJ50353.1 - 0.23 9.5 10.3 0.32 9.1 10.3 1.1 1 0 0 1 1 1 0 HOOK protein BLOC1_2 PF10046.9 BAJ50353.1 - 0.24 11.7 10.6 1.8 8.9 4.7 3.1 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4988 PF16378.5 BAJ50353.1 - 0.27 10.9 5.5 1.4 8.5 0.8 2.3 1 1 1 2 2 2 0 Domain of unknown function AATF-Che1 PF13339.6 BAJ50353.1 - 0.28 11.9 7.1 1.9 9.2 7.1 2.1 1 1 0 1 1 1 0 Apoptosis antagonizing transcription factor CC2-LZ PF16516.5 BAJ50353.1 - 0.33 11.3 6.2 0.6 10.5 4.8 2.0 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator KLRAQ PF10205.9 BAJ50353.1 - 0.33 11.2 8.5 0.64 10.3 8.5 1.4 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein Mod_r PF07200.13 BAJ50353.1 - 0.37 10.9 11.1 1.1 9.3 11.1 1.8 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Sec34 PF04136.15 BAJ50353.1 - 0.41 10.5 7.5 1.2 9.0 7.4 1.9 1 1 0 1 1 1 0 Sec34-like family YscO PF07321.12 BAJ50353.1 - 0.47 10.4 7.3 2.3 8.1 3.8 2.1 1 1 1 2 2 2 0 Type III secretion protein YscO PspA_IM30 PF04012.12 BAJ50353.1 - 0.49 9.9 9.5 2.3 7.7 3.7 2.1 1 1 1 2 2 2 0 PspA/IM30 family CCDC144C PF14915.6 BAJ50353.1 - 0.57 9.2 13.1 1.9 7.6 13.1 1.6 1 1 0 1 1 1 0 CCDC144C protein coiled-coil region DUF4763 PF15960.5 BAJ50353.1 - 0.6 9.4 9.4 0.57 9.4 5.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4763) DMPK_coil PF08826.10 BAJ50353.1 - 0.61 10.2 11.5 1.4 9.1 2.0 3.7 1 1 3 4 4 4 0 DMPK coiled coil domain like DUF4140 PF13600.6 BAJ50353.1 - 0.66 10.5 7.6 7.1 7.1 7.6 2.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) HlyE PF06109.13 BAJ50353.1 - 0.66 9.2 5.5 4.8 6.4 0.6 2.2 1 1 1 2 2 2 0 Haemolysin E (HlyE) NBP1 PF08537.10 BAJ50353.1 - 0.67 9.3 8.2 1 8.7 8.2 1.3 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 Seryl_tRNA_N PF02403.22 BAJ50353.1 - 0.7 10.1 7.1 2.4 8.4 6.5 2.0 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain CorA PF01544.18 BAJ50353.1 - 0.79 9.0 10.3 0.23 10.8 7.0 1.7 2 0 0 2 2 1 0 CorA-like Mg2+ transporter protein FemAB PF02388.16 BAJ50353.1 - 0.83 8.5 4.4 1.9 7.3 4.1 1.6 2 0 0 2 2 1 0 FemAB family Snapin_Pallidin PF14712.6 BAJ50353.1 - 0.95 9.9 9.4 16 6.0 10.0 2.6 2 1 0 2 2 1 0 Snapin/Pallidin EMP24_GP25L PF01105.24 BAJ50353.1 - 1.1 9.2 6.5 9.3 6.1 6.6 2.1 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD DUF1043 PF06295.12 BAJ50353.1 - 1.4 9.0 6.1 5 7.1 6.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) BST2 PF16716.5 BAJ50353.1 - 1.4 9.5 10.5 4.9 7.8 9.3 2.2 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 KxDL PF10241.9 BAJ50353.1 - 1.6 9.0 9.6 3.1 8.1 3.8 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein Cnn_1N PF07989.11 BAJ50353.1 - 1.7 8.9 9.1 9.4 6.5 9.1 2.2 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 DLP_helical PF18709.1 BAJ50353.1 - 1.8 7.7 6.3 0.87 8.7 2.7 1.8 1 1 1 2 2 2 0 Dynamin-like helical domain Cep57_CLD_2 PF14197.6 BAJ50353.1 - 1.8 8.7 17.8 0.2 11.8 3.9 3.2 2 1 1 3 3 2 0 Centrosome localisation domain of PPC89 Flg_hook PF02120.16 BAJ50353.1 - 1.8 8.5 7.7 11 6.0 0.8 2.6 1 1 2 3 3 2 0 Flagellar hook-length control protein FliK HIP1_clath_bdg PF16515.5 BAJ50353.1 - 1.8 9.2 11.9 6.1 7.5 11.0 2.1 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 JIP_LZII PF16471.5 BAJ50353.1 - 1.9 8.7 14.5 3 8.1 1.7 2.8 3 0 0 3 3 2 0 JNK-interacting protein leucine zipper II Noelin-1 PF12308.8 BAJ50353.1 - 2 8.5 5.1 5.7 7.0 4.5 2.0 1 1 0 1 1 1 0 Neurogenesis glycoprotein Fzo_mitofusin PF04799.13 BAJ50353.1 - 2.1 7.9 6.3 2.5 7.6 4.3 1.7 1 1 1 2 2 2 0 fzo-like conserved region Sec2p PF06428.11 BAJ50353.1 - 2.2 8.3 12.5 5.7 7.0 4.7 2.3 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p Fungal_TACC PF12709.7 BAJ50353.1 - 2.4 8.7 9.0 29 5.2 1.9 3.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins YabA PF06156.13 BAJ50353.1 - 2.5 8.8 6.6 7.9 7.2 6.6 1.9 1 1 0 1 1 1 0 Initiation control protein YabA DUF1515 PF07439.11 BAJ50353.1 - 2.9 7.9 5.8 1.3 9.0 2.2 2.2 1 1 2 3 3 2 0 Protein of unknown function (DUF1515) Swi5 PF07061.11 BAJ50353.1 - 3.6 7.8 8.1 2.8 8.1 1.4 2.7 2 1 1 3 3 2 0 Swi5 ZapB PF06005.12 BAJ50353.1 - 3.6 8.1 18.7 0.22 12.0 7.5 2.7 2 1 1 3 3 2 0 Cell division protein ZapB Muted PF14942.6 BAJ50353.1 - 3.7 7.9 8.7 5.9 7.2 7.5 1.9 2 1 0 2 2 1 0 Organelle biogenesis, Muted-like protein Phage_GPO PF05929.11 BAJ50353.1 - 3.9 7.0 6.9 12 5.5 6.9 1.6 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DivIVA PF05103.13 BAJ50353.1 - 4 7.5 7.8 11 6.1 7.8 1.7 1 1 0 1 1 1 0 DivIVA protein Shugoshin_N PF07558.11 BAJ50353.1 - 4.5 7.2 14.4 1.6 8.7 2.2 3.1 3 0 0 3 3 2 0 Shugoshin N-terminal coiled-coil region DUF3552 PF12072.8 BAJ50353.1 - 6.4 6.1 10.6 13 5.2 10.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) Syntaxin-6_N PF09177.11 BAJ50353.1 - 6.8 7.3 10.4 7.5 7.2 8.1 2.3 2 2 0 2 2 1 0 Syntaxin 6, N-terminal GrpE PF01025.19 BAJ50353.1 - 7.1 6.3 7.7 7.1 6.3 2.8 2.4 1 1 0 1 1 1 0 GrpE DUF4404 PF14357.6 BAJ50353.1 - 7.1 7.3 14.8 3.2 8.5 1.5 3.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) BPD_transp_1 PF00528.22 BAJ50354.1 - 8.1e-35 120.2 11.4 8.1e-35 120.2 11.4 2.2 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 BAJ50355.1 - 1.1e-21 77.8 0.0 1.5e-21 77.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 BAJ50355.1 - 6e-19 68.3 0.3 9.5e-19 67.7 0.3 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 BAJ50355.1 - 1.1e-10 41.9 0.3 7e-10 39.2 0.0 2.0 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ50355.1 - 9.7e-06 25.2 0.2 4.8e-05 22.9 0.2 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAJ50355.1 - 2.1e-05 24.8 0.1 0.063 13.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain TniB PF05621.11 BAJ50355.1 - 0.00027 20.4 0.2 0.0025 17.3 0.1 2.2 2 0 0 2 2 2 1 Bacterial TniB protein AAA PF00004.29 BAJ50355.1 - 0.0014 19.1 0.4 0.014 15.8 0.4 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ABC_ATPase PF09818.9 BAJ50355.1 - 0.019 13.8 0.2 0.096 11.5 0.2 1.8 1 1 0 1 1 1 0 Predicted ATPase of the ABC class DUF3265 PF11665.8 BAJ50355.1 - 0.045 14.0 0.1 0.16 12.2 0.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3265) PRK PF00485.18 BAJ50355.1 - 0.071 12.8 0.1 0.92 9.2 0.0 2.5 3 0 0 3 3 3 0 Phosphoribulokinase / Uridine kinase family AAA_25 PF13481.6 BAJ50355.1 - 0.16 11.5 0.2 2.8 7.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain PhoU PF01895.19 BAJ50355.1 - 0.18 12.3 0.2 0.31 11.5 0.2 1.3 1 0 0 1 1 1 0 PhoU domain SbcCD_C PF13558.6 BAJ50355.1 - 0.2 11.9 0.0 0.69 10.2 0.0 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit BPD_transp_1 PF00528.22 BAJ50356.1 - 3.5e-22 79.1 14.1 3.5e-22 79.1 14.1 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 BAJ50356.1 - 0.073 13.0 0.1 0.073 13.0 0.1 3.1 3 1 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C DUF4131 PF13567.6 BAJ50356.1 - 6.8 6.3 7.6 3.9 7.1 0.8 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) MarR_2 PF12802.7 BAJ50357.1 - 0.004 17.0 0.0 0.0056 16.5 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.22 BAJ50357.1 - 0.012 15.5 0.1 0.019 14.9 0.1 1.3 1 0 0 1 1 1 0 MarR family TrmB PF01978.19 BAJ50357.1 - 0.012 15.4 0.0 0.017 15.0 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB z-alpha PF02295.17 BAJ50357.1 - 0.024 14.7 0.0 0.037 14.1 0.0 1.3 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain HTH_Crp_2 PF13545.6 BAJ50357.1 - 0.026 14.5 0.0 0.045 13.7 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 BAJ50357.1 - 0.032 14.6 0.0 0.067 13.5 0.0 1.5 1 1 1 2 2 2 0 Transcriptional regulator SMC_Nse1 PF07574.13 BAJ50357.1 - 0.1 12.5 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex AAA_22 PF13401.6 BAJ50358.1 - 3.2e-09 37.2 0.0 7.7e-09 35.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 BAJ50358.1 - 2.8e-06 27.4 0.0 5.1e-06 26.6 0.0 1.5 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 BAJ50358.1 - 1e-05 26.0 1.9 0.00027 21.4 0.3 2.9 2 1 0 2 2 2 1 AAA ATPase domain Bac_DnaA PF00308.18 BAJ50358.1 - 0.0013 18.6 0.0 0.12 12.2 0.0 2.5 2 1 0 2 2 2 1 Bacterial dnaA protein AAA PF00004.29 BAJ50358.1 - 0.0015 18.9 0.0 0.0031 17.9 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 BAJ50358.1 - 0.0062 15.8 0.1 0.015 14.5 0.0 1.6 2 0 0 2 2 2 1 NB-ARC domain TIP49_C PF17856.1 BAJ50358.1 - 0.013 15.6 0.1 4.8 7.4 0.0 2.6 2 0 0 2 2 2 0 TIP49 AAA-lid domain ATP_bind_1 PF03029.17 BAJ50358.1 - 0.019 14.8 0.0 0.037 13.8 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Cdc6_C PF09079.11 BAJ50358.1 - 0.021 14.8 0.1 0.065 13.2 0.0 1.9 2 0 0 2 2 2 0 CDC6, C terminal winged helix domain NACHT PF05729.12 BAJ50358.1 - 0.025 14.5 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 NACHT domain RuvB_N PF05496.12 BAJ50358.1 - 0.036 13.8 0.0 0.074 12.8 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain TFIID_NTD2 PF04494.15 BAJ50358.1 - 0.061 13.6 1.2 12 6.1 0.1 2.9 2 1 2 4 4 4 0 WD40 associated region in TFIID subunit, NTD2 domain AAA_18 PF13238.6 BAJ50358.1 - 0.061 13.9 0.0 0.14 12.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 BAJ50358.1 - 0.079 12.2 0.0 0.17 11.2 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 BAJ50358.1 - 0.1 13.1 0.0 0.21 12.1 0.0 1.6 1 0 0 1 1 1 0 ABC transporter PduV-EutP PF10662.9 BAJ50358.1 - 0.17 11.6 0.1 0.46 10.2 0.0 1.7 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation GYD PF08734.11 BAJ50359.1 - 3.5e-11 42.9 0.0 4.1e-11 42.7 0.0 1.1 1 0 0 1 1 1 1 GYD domain AsnC_trans_reg PF01037.21 BAJ50359.1 - 0.011 15.7 0.0 0.016 15.2 0.0 1.3 1 1 0 1 1 1 0 Lrp/AsnC ligand binding domain FlaG PF03646.15 BAJ50359.1 - 0.049 13.8 0.0 0.38 11.0 0.0 2.0 2 0 0 2 2 2 0 FlaG protein DUF5495 PF17599.2 BAJ50360.1 - 0.14 12.5 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5495) DAO PF01266.24 BAJ50361.1 - 8.5e-62 209.8 0.3 9.6e-62 209.6 0.3 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 BAJ50361.1 - 3.9e-07 29.6 0.3 0.0016 17.7 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 BAJ50361.1 - 1.8e-06 27.1 1.2 0.0013 17.6 0.8 2.1 2 0 0 2 2 2 2 Tryptophan halogenase FAD_oxidored PF12831.7 BAJ50361.1 - 6.3e-06 25.8 0.3 0.021 14.2 0.2 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 BAJ50361.1 - 5e-05 22.6 0.4 0.00012 21.5 0.2 1.7 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 BAJ50361.1 - 9.5e-05 21.7 0.7 0.00015 21.0 0.4 1.5 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 BAJ50361.1 - 0.0003 20.9 1.0 0.00081 19.6 1.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 BAJ50361.1 - 0.00032 20.1 0.0 0.27 10.4 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 BAJ50361.1 - 0.0033 16.7 1.2 0.012 14.8 0.8 1.9 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 BAJ50361.1 - 0.0037 16.0 0.3 1.5 7.4 0.2 2.1 2 0 0 2 2 2 2 HI0933-like protein GMC_oxred_N PF00732.19 BAJ50361.1 - 0.0059 16.0 0.2 0.39 10.0 0.0 2.2 2 0 0 2 2 2 1 GMC oxidoreductase Pyr_redox PF00070.27 BAJ50361.1 - 0.02 15.4 0.6 0.077 13.6 0.3 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 BAJ50361.1 - 0.043 12.9 0.5 0.079 12.0 0.5 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A ThiF PF00899.21 BAJ50361.1 - 0.045 13.1 0.1 0.081 12.3 0.1 1.3 1 0 0 1 1 1 0 ThiF family TrkA_N PF02254.18 BAJ50361.1 - 0.13 12.5 0.5 0.51 10.6 0.2 2.0 1 1 1 2 2 2 0 TrkA-N domain NAD_binding_9 PF13454.6 BAJ50361.1 - 0.19 11.7 1.5 1.8 8.5 0.1 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding 3HCDH_N PF02737.18 BAJ50361.1 - 0.26 11.1 0.3 0.55 10.1 0.3 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HTH_23 PF13384.6 BAJ50362.1 - 0.074 12.9 0.1 0.18 11.6 0.1 1.7 1 0 0 1 1 1 0 Homeodomain-like domain CarS-like PF01864.17 BAJ50363.1 - 5.1e-38 130.8 5.3 1.5e-37 129.2 5.3 1.6 1 1 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 BAJ50363.1 - 0.0016 18.3 5.4 0.0016 18.3 5.4 2.2 1 1 1 2 2 2 2 Cytidylyltransferase family Bacteriocin_IIc PF10439.9 BAJ50363.1 - 0.21 11.8 3.5 0.45 10.7 3.5 1.5 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide RNase_H_2 PF13482.6 BAJ50364.1 - 0.0015 18.6 0.0 0.0018 18.3 0.0 1.1 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 BAJ50364.1 - 0.064 12.9 0.0 0.09 12.4 0.0 1.3 1 1 0 1 1 1 0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_B_exo1 PF03104.19 BAJ50364.1 - 0.15 11.1 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase family B, exonuclease domain AdoHcyase PF05221.17 BAJ50365.1 - 2e-62 211.1 0.0 8e-61 205.8 0.0 2.0 1 1 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 BAJ50365.1 - 5.2e-54 182.7 2.0 9.4e-54 181.8 0.7 2.0 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 BAJ50365.1 - 2.6e-11 43.2 0.4 4.7e-11 42.4 0.4 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 BAJ50365.1 - 8.8e-05 22.9 0.2 0.00024 21.5 0.2 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.18 BAJ50365.1 - 0.00012 22.3 0.1 0.0003 21.0 0.1 1.7 1 0 0 1 1 1 1 TrkA-N domain IlvN PF07991.12 BAJ50365.1 - 0.00037 20.1 0.4 0.00075 19.1 0.4 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain ELFV_dehydrog PF00208.21 BAJ50365.1 - 0.041 13.6 0.3 0.064 13.0 0.3 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XdhC_C PF13478.6 BAJ50365.1 - 0.049 14.1 0.1 0.17 12.4 0.1 1.9 2 0 0 2 2 2 0 XdhC Rossmann domain ADH_zinc_N PF00107.26 BAJ50365.1 - 0.064 13.2 0.5 0.3 11.1 0.2 2.2 2 0 0 2 2 2 0 Zinc-binding dehydrogenase 3HCDH_N PF02737.18 BAJ50365.1 - 0.09 12.7 2.2 0.13 12.1 1.4 1.8 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 BAJ50365.1 - 0.17 12.5 0.4 0.45 11.1 0.4 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 BAJ50365.1 - 0.38 10.0 4.3 1.2 8.4 4.0 1.8 1 1 1 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain eIF-5_eIF-2B PF01873.17 BAJ50366.1 - 2.9e-27 94.8 0.0 3.6e-27 94.6 0.0 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Lar_restr_allev PF14354.6 BAJ50366.1 - 0.0039 17.5 0.4 0.0064 16.8 0.4 1.3 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 BAJ50366.1 - 0.0073 15.8 1.0 0.013 15.0 0.5 1.7 2 0 0 2 2 2 1 TFIIB zinc-binding zf-RRN7 PF11781.8 BAJ50366.1 - 0.054 13.2 0.7 11 5.8 0.0 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-ribbon_3 PF13248.6 BAJ50366.1 - 0.14 11.6 0.9 13 5.4 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 BAJ50366.1 - 0.22 11.3 1.0 7.1 6.4 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain DUF424 PF04242.13 BAJ50367.1 - 1.1e-19 70.5 0.1 1.2e-19 70.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) MazG PF03819.17 BAJ50368.1 - 7.1e-05 22.9 0.1 9.9e-05 22.4 0.1 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain MazG-like PF12643.7 BAJ50368.1 - 0.014 15.7 0.0 0.02 15.1 0.0 1.4 1 0 0 1 1 1 0 MazG-like family DUF3782 PF12644.7 BAJ50368.1 - 0.046 13.9 0.5 0.23 11.7 0.1 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF3782) SUV3_C PF12513.8 BAJ50368.1 - 0.047 13.6 0.1 0.18 11.8 0.0 1.9 2 0 0 2 2 2 0 Mitochondrial degradasome RNA helicase subunit C terminal HMG-CoA_red PF00368.18 BAJ50369.1 - 1.4e-113 379.6 2.8 1.8e-113 379.3 2.8 1.1 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase FliG_N PF14842.6 BAJ50369.1 - 0.0013 19.3 1.0 6.2 7.4 0.1 3.9 4 0 0 4 4 4 2 FliG N-terminal domain DUF4443 PF14544.6 BAJ50370.1 - 3.1e-05 24.1 0.0 6.1e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4443) PaaX PF07848.12 BAJ50370.1 - 0.0035 17.5 0.4 0.0075 16.5 0.4 1.6 1 0 0 1 1 1 1 PaaX-like protein HTH_45 PF14947.6 BAJ50370.1 - 0.029 14.3 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DUF4093 PF13331.6 BAJ50370.1 - 0.039 14.4 0.0 0.076 13.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) Fe_dep_repress PF01325.19 BAJ50370.1 - 0.04 14.1 0.0 0.12 12.6 0.0 1.8 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Topoisom_bac PF01131.20 BAJ50370.1 - 0.069 12.2 0.0 0.081 11.9 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase SRP54 PF00448.22 BAJ50371.1 - 9.9e-67 224.4 0.2 1.4e-66 223.8 0.2 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 BAJ50371.1 - 7.4e-07 29.3 1.6 1.9e-06 28.0 0.3 2.4 2 1 0 2 2 2 1 SRP54-type protein, helical bundle domain AAA_16 PF13191.6 BAJ50371.1 - 1.5e-06 28.7 0.0 2.8e-06 27.8 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 BAJ50371.1 - 2.3e-06 27.1 0.0 4.5e-06 26.1 0.0 1.5 1 1 0 1 1 1 1 Zeta toxin CbiA PF01656.23 BAJ50371.1 - 6.3e-06 26.3 0.0 2.3e-05 24.4 0.0 2.1 2 1 0 2 2 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.6 BAJ50371.1 - 7.8e-06 25.7 0.8 1.2e-05 25.1 0.8 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 BAJ50371.1 - 8.7e-06 26.2 0.0 1.9e-05 25.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 BAJ50371.1 - 1.1e-05 25.1 1.4 6.9e-05 22.5 0.2 2.4 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain APS_kinase PF01583.20 BAJ50371.1 - 0.00012 22.0 0.0 0.00025 21.0 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase NTPase_1 PF03266.15 BAJ50371.1 - 0.00017 21.6 0.3 0.0012 18.8 0.3 2.3 1 1 0 1 1 1 1 NTPase AAA_33 PF13671.6 BAJ50371.1 - 0.00024 21.3 0.0 0.00044 20.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 BAJ50371.1 - 0.00025 21.5 0.1 0.0035 17.8 0.0 2.5 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 BAJ50371.1 - 0.00038 20.8 0.0 0.0012 19.1 0.0 1.8 1 1 1 2 2 2 1 AAA domain CLP1_P PF16575.5 BAJ50371.1 - 0.00069 19.5 0.1 1 9.1 0.0 2.3 2 0 0 2 2 2 2 mRNA cleavage and polyadenylation factor CLP1 P-loop MobB PF03205.14 BAJ50371.1 - 0.0011 18.9 0.0 0.0031 17.4 0.0 1.8 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_31 PF13614.6 BAJ50371.1 - 0.0014 18.6 0.2 0.0048 16.8 0.0 1.9 2 0 0 2 2 2 1 AAA domain KTI12 PF08433.10 BAJ50371.1 - 0.0015 18.0 0.0 0.0026 17.2 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 MeaB PF03308.16 BAJ50371.1 - 0.0017 17.4 0.2 0.0036 16.3 0.2 1.7 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_5 PF07728.14 BAJ50371.1 - 0.0019 18.2 0.0 0.0031 17.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.17 BAJ50371.1 - 0.0042 16.9 0.4 0.018 14.8 0.1 2.3 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein ResIII PF04851.15 BAJ50371.1 - 0.0044 17.0 0.0 0.0071 16.4 0.0 1.5 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_28 PF13521.6 BAJ50371.1 - 0.0044 17.3 0.1 0.014 15.6 0.1 1.7 1 1 1 2 2 1 1 AAA domain AAA_11 PF13086.6 BAJ50371.1 - 0.006 16.4 0.0 0.013 15.4 0.0 1.6 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 BAJ50371.1 - 0.0062 16.2 0.0 0.031 14.0 0.0 2.0 2 0 0 2 2 2 1 Thymidylate kinase AAA_19 PF13245.6 BAJ50371.1 - 0.0088 16.4 0.1 0.017 15.5 0.1 1.5 1 1 0 1 1 1 1 AAA domain T2SSE PF00437.20 BAJ50371.1 - 0.01 14.9 0.1 0.039 13.0 0.0 1.9 1 1 1 2 2 2 0 Type II/IV secretion system protein AAA_7 PF12775.7 BAJ50371.1 - 0.012 15.1 0.0 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 BAJ50371.1 - 0.015 15.3 0.0 1.2 9.2 0.0 2.6 2 1 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 BAJ50371.1 - 0.02 15.4 0.0 0.028 14.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_23 PF13476.6 BAJ50371.1 - 0.02 15.4 0.0 0.033 14.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 BAJ50371.1 - 0.02 14.3 0.0 1.1 8.6 0.0 2.5 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Rad17 PF03215.15 BAJ50371.1 - 0.022 14.7 0.0 0.038 13.9 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain ATPase_2 PF01637.18 BAJ50371.1 - 0.031 14.2 0.0 0.079 12.9 0.0 1.6 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_29 PF13555.6 BAJ50371.1 - 0.049 13.4 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain TrwB_AAD_bind PF10412.9 BAJ50371.1 - 0.057 12.3 0.0 0.1 11.5 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ArsA_ATPase PF02374.15 BAJ50371.1 - 0.06 12.5 0.1 0.21 10.7 0.0 1.9 2 0 0 2 2 2 0 Anion-transporting ATPase NACHT PF05729.12 BAJ50371.1 - 0.064 13.2 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 NACHT domain IstB_IS21 PF01695.17 BAJ50371.1 - 0.065 13.0 0.1 0.32 10.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_2 PF07724.14 BAJ50371.1 - 0.066 13.3 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) SWI2_SNF2 PF18766.1 BAJ50371.1 - 0.067 12.9 0.0 7.1 6.2 0.0 2.1 1 1 0 2 2 2 0 SWI2/SNF2 ATPase G-alpha PF00503.20 BAJ50371.1 - 0.073 12.2 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit 6PF2K PF01591.18 BAJ50371.1 - 0.088 12.1 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_25 PF13481.6 BAJ50371.1 - 0.096 12.2 0.4 0.31 10.6 0.4 2.0 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 BAJ50371.1 - 0.11 12.6 1.0 0.55 10.3 0.2 2.4 2 1 0 2 2 2 0 50S ribosome-binding GTPase SMC_N PF02463.19 BAJ50371.1 - 0.13 11.7 0.0 0.23 10.8 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain TIR_2 PF13676.6 BAJ50371.1 - 0.15 12.7 0.0 0.51 11.0 0.0 1.9 2 0 0 2 2 1 0 TIR domain AAA_24 PF13479.6 BAJ50371.1 - 0.18 11.5 0.1 0.49 10.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 BAJ50371.1 - 0.22 11.2 0.0 0.36 10.5 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_21 PF13304.6 BAJ50371.1 - 0.23 11.2 0.3 0.35 10.6 0.3 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Prefoldin PF02996.17 BAJ50372.1 - 1.4e-19 70.2 0.6 2e-19 69.7 0.6 1.2 1 0 0 1 1 1 1 Prefoldin subunit BLOC1_2 PF10046.9 BAJ50372.1 - 0.0042 17.3 2.7 0.6 10.4 0.3 2.2 2 0 0 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Lzipper-MIP1 PF14389.6 BAJ50372.1 - 0.0062 16.8 6.5 0.08 13.2 1.2 2.5 2 0 0 2 2 2 1 Leucine-zipper of ternary complex factor MIP1 Exonuc_VII_S PF02609.16 BAJ50372.1 - 0.0063 16.5 3.4 0.0063 16.5 3.4 2.7 4 0 0 4 4 3 1 Exonuclease VII small subunit DHR10 PF18595.1 BAJ50372.1 - 0.0094 16.0 10.5 0.027 14.5 2.5 2.1 2 0 0 2 2 2 2 Designed helical repeat protein 10 domain HMA PF00403.26 BAJ50372.1 - 0.0095 16.4 0.1 1 9.9 0.0 2.2 2 0 0 2 2 2 1 Heavy-metal-associated domain Tropomyosin_1 PF12718.7 BAJ50372.1 - 0.034 14.3 4.4 0.36 11.0 0.1 2.1 2 0 0 2 2 2 0 Tropomyosin like adh_short PF00106.25 BAJ50372.1 - 0.054 13.0 0.2 0.084 12.3 0.1 1.4 1 1 0 1 1 1 0 short chain dehydrogenase Spc7 PF08317.11 BAJ50372.1 - 0.058 12.3 5.1 0.56 9.0 0.4 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF3450 PF11932.8 BAJ50372.1 - 0.16 11.3 8.5 1.5 8.1 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) TMF_DNA_bd PF12329.8 BAJ50372.1 - 0.24 11.4 6.9 2.5 8.2 1.7 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding KxDL PF10241.9 BAJ50372.1 - 0.24 11.7 2.9 1 9.7 0.2 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein FmiP_Thoc5 PF09766.9 BAJ50372.1 - 0.26 10.6 3.8 0.41 9.9 0.3 2.0 2 0 0 2 2 2 0 Fms-interacting protein/Thoc5 DUF5320 PF17253.2 BAJ50372.1 - 0.27 12.3 0.8 0.9 10.6 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5320) DivIC PF04977.15 BAJ50372.1 - 0.32 10.8 6.9 0.81 9.5 0.2 2.2 2 0 0 2 2 2 0 Septum formation initiator ZapB PF06005.12 BAJ50372.1 - 1.2 9.6 12.1 4.9 7.7 2.4 2.3 2 0 0 2 2 2 0 Cell division protein ZapB DivIVA PF05103.13 BAJ50372.1 - 3.1 7.9 7.7 0.69 10.0 0.7 2.1 2 0 0 2 2 2 0 DivIVA protein SlyX PF04102.12 BAJ50372.1 - 6.3 7.5 12.6 5.3 7.7 1.5 3.1 2 1 1 3 3 3 0 SlyX eIF-6 PF01912.18 BAJ50373.1 - 2.5e-57 193.5 4.8 3.1e-57 193.2 4.8 1.1 1 0 0 1 1 1 1 eIF-6 family Ribosomal_L31e PF01198.19 BAJ50374.1 - 1.7e-09 37.8 0.2 2.2e-09 37.4 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L31e DUF1116 PF06545.11 BAJ50375.1 - 4.1e-91 304.2 0.0 5.5e-91 303.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1116) Cyclase PF04199.13 BAJ50376.1 - 2.9e-32 111.8 0.0 3.9e-32 111.3 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase Ligase_CoA PF00549.19 BAJ50377.1 - 1.7e-29 102.6 0.0 5e-29 101.1 0.0 1.8 2 0 0 2 2 2 1 CoA-ligase CoA_binding PF02629.19 BAJ50377.1 - 0.0001 22.9 5.9 0.0024 18.5 0.3 3.2 3 0 0 3 3 3 2 CoA binding domain DUF2877 PF11392.8 BAJ50379.1 - 8e-19 68.4 0.0 1.2e-18 67.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2877) Ald_Xan_dh_C2 PF02738.18 BAJ50381.1 - 1.7e-177 591.2 0.0 2.2e-177 590.9 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50381.1 - 8.4e-25 87.3 0.0 8.4e-25 87.3 0.0 2.4 3 0 0 3 3 3 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Carboxyl_trans PF01039.22 BAJ50382.1 - 3.7e-110 368.9 0.8 4.7e-110 368.6 0.8 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 BAJ50382.1 - 9.7e-06 25.2 0.2 2.7e-05 23.8 0.0 1.8 2 0 0 2 2 2 1 Malonate decarboxylase gamma subunit (MdcE) Ald_Xan_dh_C2 PF02738.18 BAJ50383.1 - 7.7e-162 539.6 0.0 9.7e-162 539.2 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50383.1 - 5.7e-28 97.5 0.0 1.4e-27 96.2 0.0 1.7 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FAD_binding_5 PF00941.21 BAJ50384.1 - 7.5e-48 162.5 0.0 1.1e-47 162.0 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 BAJ50384.1 - 1.8e-20 73.0 0.3 3.2e-20 72.2 0.3 1.4 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.20 BAJ50385.1 - 5.6e-25 87.2 0.0 5.6e-25 87.2 0.0 1.7 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 BAJ50385.1 - 1.5e-07 31.3 2.9 1.8e-07 31.0 0.2 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 BAJ50385.1 - 0.00029 20.8 1.2 0.00032 20.7 0.3 1.6 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain ThiS PF02597.20 BAJ50386.1 - 2.1e-10 41.1 0.7 2.6e-09 37.6 0.7 2.0 1 1 0 1 1 1 1 ThiS family Urm1 PF09138.11 BAJ50386.1 - 0.0046 17.3 0.0 0.0054 17.0 0.0 1.1 1 0 0 1 1 1 1 Urm1 (Ubiquitin related modifier) TGS PF02824.21 BAJ50386.1 - 0.025 14.6 0.0 0.035 14.1 0.0 1.3 1 0 0 1 1 1 0 TGS domain MIT_C PF16565.5 BAJ50386.1 - 0.086 12.8 0.0 0.093 12.7 0.0 1.2 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT Amidohydro_3 PF07969.11 BAJ50387.1 - 7.4e-27 94.9 0.5 1e-20 74.7 0.2 2.1 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 BAJ50387.1 - 4.8e-10 39.3 0.3 1.3e-07 31.3 0.3 2.2 1 1 0 1 1 1 1 Amidohydrolase family ABC_tran PF00005.27 BAJ50388.1 - 1.2e-50 171.6 0.0 3.3e-31 108.6 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 BAJ50388.1 - 3.1e-07 30.5 0.1 0.0043 16.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 BAJ50388.1 - 0.0032 17.4 0.2 0.061 13.2 0.0 2.7 3 0 0 3 3 3 1 RsgA GTPase AAA_29 PF13555.6 BAJ50388.1 - 0.0074 16.0 0.1 0.028 14.2 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 BAJ50388.1 - 0.01 16.4 0.1 0.032 14.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 BAJ50388.1 - 0.013 14.9 0.0 1.8 8.0 0.0 2.5 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAJ50388.1 - 0.035 14.4 0.1 0.23 11.7 0.1 2.3 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 BAJ50388.1 - 0.053 13.1 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain DLIC PF05783.11 BAJ50388.1 - 0.089 11.6 0.0 0.58 8.9 0.0 2.0 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) Histidinol_dh PF00815.20 BAJ50388.1 - 0.14 11.1 0.0 0.24 10.4 0.0 1.3 1 0 0 1 1 1 0 Histidinol dehydrogenase BPD_transp_2 PF02653.16 BAJ50389.1 - 9.3e-33 113.5 23.9 9.3e-33 113.5 23.9 1.6 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component NAR2 PF16974.5 BAJ50389.1 - 0.15 11.5 0.2 0.31 10.4 0.2 1.5 1 0 0 1 1 1 0 High-affinity nitrate transporter accessory BPD_transp_2 PF02653.16 BAJ50390.1 - 1e-30 106.9 28.7 2.2e-30 105.8 28.7 1.5 1 1 0 1 1 1 1 Branched-chain amino acid transport system / permease component Bmp PF02608.14 BAJ50391.1 - 6.3e-24 84.5 0.0 8.6e-24 84.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like Bmp PF02608.14 BAJ50392.1 - 3.3e-27 95.2 0.0 4.7e-27 94.8 0.0 1.1 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like ZnuA PF01297.17 BAJ50392.1 - 0.023 14.1 0.0 5.1 6.4 0.0 2.2 1 1 0 2 2 2 0 Zinc-uptake complex component A periplasmic ABC_tran PF00005.27 BAJ50393.1 - 6e-30 104.5 0.0 9.9e-17 61.7 0.0 2.6 3 0 0 3 3 3 2 ABC transporter AAA_23 PF13476.6 BAJ50393.1 - 5.8e-05 23.7 0.0 0.0001 22.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 BAJ50393.1 - 0.00041 19.8 0.7 0.63 9.4 0.1 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAJ50393.1 - 0.00072 19.5 5.3 0.0066 16.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 BAJ50393.1 - 0.005 16.8 0.2 0.018 14.9 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 BAJ50393.1 - 0.0065 16.2 0.0 0.014 15.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 BAJ50393.1 - 0.015 15.6 1.2 0.67 10.2 0.3 2.3 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 BAJ50393.1 - 0.047 14.1 0.0 0.11 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_15 PF13175.6 BAJ50393.1 - 0.06 13.1 0.0 0.096 12.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 BAJ50393.1 - 0.11 12.5 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_27 PF13514.6 BAJ50393.1 - 0.16 11.5 0.0 0.29 10.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain BPD_transp_2 PF02653.16 BAJ50394.1 - 1.5e-55 188.2 75.0 7.6e-28 97.4 36.9 2.5 2 0 0 2 2 2 2 Branched-chain amino acid transport system / permease component HTH_28 PF13518.6 BAJ50394.1 - 0.19 11.9 0.0 0.38 10.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain PrmC_N PF17827.1 BAJ50395.1 - 0.095 13.3 2.0 0.69 10.5 0.1 2.7 2 1 1 3 3 3 0 PrmC N-terminal domain Cnd1 PF12717.7 BAJ50395.1 - 0.17 11.9 1.5 0.62 10.1 0.3 2.0 2 0 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 ELFV_dehydrog PF00208.21 BAJ50396.1 - 4.2e-51 174.0 0.0 5.6e-51 173.6 0.0 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 BAJ50396.1 - 1.2e-26 93.1 0.0 2.9e-26 91.9 0.0 1.6 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 BAJ50396.1 - 0.01 15.2 0.0 0.022 14.1 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Gp_dh_N PF00044.24 BAJ50396.1 - 0.029 14.7 0.2 0.54 10.6 0.1 2.4 1 1 1 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DUF488 PF04343.13 BAJ50397.1 - 7.4e-29 100.8 0.0 8.8e-29 100.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF488 TrmO PF01980.16 BAJ50398.1 - 3.1e-29 101.6 0.0 4.7e-29 101.0 0.0 1.2 1 0 0 1 1 1 1 tRNA-methyltransferase O EamA PF00892.20 BAJ50399.1 - 4.3e-11 43.1 21.0 4.7e-11 43.0 21.0 1.0 1 0 0 1 1 1 1 EamA-like transporter family YfhO PF09586.10 BAJ50399.1 - 7.9 4.6 8.3 8.7 4.4 8.3 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Nre_N PF04894.12 BAJ50400.1 - 2.1e-81 273.7 0.0 2.9e-81 273.3 0.0 1.2 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 BAJ50400.1 - 3.3e-30 104.2 0.0 6e-30 103.4 0.0 1.4 1 0 0 1 1 1 1 Archaeal Nre, C-terminal T2SSE PF00437.20 BAJ50401.1 - 1.5e-09 37.3 0.0 2.4e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_18 PF13238.6 BAJ50401.1 - 7.3e-05 23.3 0.0 0.00075 20.0 0.0 2.5 3 0 0 3 3 2 1 AAA domain AAA_14 PF13173.6 BAJ50401.1 - 0.00072 19.6 0.0 0.0014 18.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.12 BAJ50401.1 - 0.00088 19.1 0.0 0.018 14.8 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 BAJ50401.1 - 0.001 19.5 0.0 0.0019 18.6 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 BAJ50401.1 - 0.0034 17.8 0.0 0.0075 16.7 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 BAJ50401.1 - 0.0041 16.9 0.0 0.0067 16.2 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_5 PF07728.14 BAJ50401.1 - 0.0069 16.4 0.0 0.014 15.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 BAJ50401.1 - 0.023 14.9 0.0 0.069 13.3 0.0 1.8 2 0 0 2 2 1 0 AAA domain Rad17 PF03215.15 BAJ50401.1 - 0.025 14.5 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_22 PF13401.6 BAJ50401.1 - 0.033 14.5 0.0 0.07 13.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 BAJ50401.1 - 0.035 13.9 0.0 0.055 13.2 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_28 PF13521.6 BAJ50401.1 - 0.046 14.0 0.0 0.11 12.7 0.0 1.7 2 0 0 2 2 1 0 AAA domain RNA_helicase PF00910.22 BAJ50401.1 - 0.046 14.1 0.0 0.084 13.3 0.0 1.5 1 0 0 1 1 1 0 RNA helicase NTPase_1 PF03266.15 BAJ50401.1 - 0.049 13.5 0.0 0.22 11.4 0.0 2.0 2 0 0 2 2 2 0 NTPase Sigma54_activ_2 PF14532.6 BAJ50401.1 - 0.054 13.6 0.0 0.091 12.9 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain NACHT PF05729.12 BAJ50401.1 - 0.056 13.4 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 BAJ50401.1 - 0.072 12.8 0.0 0.16 11.7 0.0 1.6 2 0 0 2 2 1 0 AAA domain AAA_29 PF13555.6 BAJ50401.1 - 0.077 12.8 0.0 0.19 11.5 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain KTI12 PF08433.10 BAJ50401.1 - 0.087 12.3 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DnaB_C PF03796.15 BAJ50401.1 - 0.099 12.0 0.0 0.2 11.0 0.0 1.4 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain ABC_tran PF00005.27 BAJ50401.1 - 0.12 12.9 0.0 0.27 11.8 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_25 PF13481.6 BAJ50401.1 - 0.12 11.9 0.0 0.25 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 BAJ50401.1 - 0.14 11.3 0.0 0.26 10.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Sigma54_activat PF00158.26 BAJ50401.1 - 0.17 11.5 0.0 0.33 10.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 BAJ50401.1 - 0.2 10.9 0.0 0.49 9.6 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin PUA PF01472.20 BAJ50402.1 - 5.3e-17 61.5 0.2 8.6e-17 60.9 0.2 1.3 1 0 0 1 1 1 1 PUA domain ParA PF10609.9 BAJ50403.1 - 9.5e-94 313.4 0.9 1.3e-93 313.0 0.9 1.2 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase FeS_assembly_P PF01883.19 BAJ50403.1 - 6.8e-23 80.6 1.9 1.9e-22 79.2 0.3 2.5 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein CbiA PF01656.23 BAJ50403.1 - 9.8e-15 54.7 0.0 6.7e-14 52.1 0.0 2.1 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 BAJ50403.1 - 2e-11 44.1 0.6 1e-09 38.5 0.7 2.2 2 0 0 2 2 2 1 AAA domain Fer4_NifH PF00142.18 BAJ50403.1 - 5.6e-07 29.3 0.1 0.015 14.8 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.11 BAJ50403.1 - 3.3e-06 26.6 0.2 6.6e-06 25.6 0.2 1.6 1 1 0 1 1 1 1 ATPase MipZ VirC1 PF07015.11 BAJ50403.1 - 8.8e-05 21.9 0.2 0.00014 21.2 0.2 1.2 1 0 0 1 1 1 1 VirC1 protein ArsA_ATPase PF02374.15 BAJ50403.1 - 0.00012 21.4 2.7 0.00048 19.4 1.4 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_25 PF13481.6 BAJ50403.1 - 0.00033 20.3 0.2 0.00093 18.8 0.2 1.7 1 0 0 1 1 1 1 AAA domain AAA_26 PF13500.6 BAJ50403.1 - 0.0027 17.5 0.9 0.12 12.1 0.0 2.4 2 0 0 2 2 2 1 AAA domain Sensor PF13796.6 BAJ50403.1 - 0.016 15.2 0.3 0.03 14.4 0.3 1.4 1 0 0 1 1 1 0 Putative sensor CBP_BcsQ PF06564.12 BAJ50403.1 - 0.019 14.4 0.9 0.43 10.0 0.7 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ SRP54 PF00448.22 BAJ50403.1 - 0.023 14.3 0.4 0.067 12.8 0.2 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain A2L_zn_ribbon PF08792.10 BAJ50403.1 - 0.044 13.5 0.2 0.076 12.8 0.2 1.3 1 0 0 1 1 1 0 A2L zinc ribbon domain CLP1_P PF16575.5 BAJ50403.1 - 0.055 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop zf_UBZ PF18439.1 BAJ50403.1 - 0.2 11.3 0.1 0.37 10.4 0.1 1.5 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger AAA_30 PF13604.6 BAJ50403.1 - 5.5 6.7 6.6 20 4.8 0.3 2.9 3 0 0 3 3 3 0 AAA domain CBS PF00571.28 BAJ50404.1 - 1.7e-45 153.3 13.7 1.2e-16 60.9 0.9 4.3 4 0 0 4 4 4 4 CBS domain Phage_Mu_Gp45 PF06890.12 BAJ50404.1 - 0.048 13.4 0.4 0.5 10.1 0.1 2.6 2 1 0 2 2 2 0 Bacteriophage Mu Gp45 protein Phage_holin_5_1 PF06946.11 BAJ50405.1 - 0.56 10.6 0.1 0.56 10.6 0.1 2.8 2 1 2 4 4 4 0 Bacteriophage A118-like holin, Hol118 ADH_zinc_N PF00107.26 BAJ50406.1 - 2.7e-25 88.8 2.2 6e-25 87.7 1.8 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 BAJ50406.1 - 8e-25 86.8 1.5 8e-25 86.8 1.5 1.9 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 BAJ50406.1 - 2.7e-09 36.8 0.6 3.7e-09 36.4 0.6 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 BAJ50406.1 - 7.9e-08 33.4 0.1 1.8e-07 32.3 0.1 1.7 1 0 0 1 1 1 1 Zinc-binding dehydrogenase TrkA_N PF02254.18 BAJ50406.1 - 0.00064 20.0 0.4 0.0011 19.2 0.4 1.3 1 0 0 1 1 1 1 TrkA-N domain AlaDh_PNT_C PF01262.21 BAJ50406.1 - 0.00069 19.0 0.9 0.00069 19.0 0.9 1.9 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 BAJ50406.1 - 0.037 13.6 0.3 0.068 12.7 0.3 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 BAJ50406.1 - 0.039 13.3 0.2 0.091 12.1 0.1 1.6 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 BAJ50406.1 - 0.45 11.1 3.1 24 5.6 1.2 2.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Acylphosphatase PF00708.18 BAJ50407.1 - 1.2e-21 76.9 0.0 1.8e-21 76.3 0.0 1.3 1 0 0 1 1 1 1 Acylphosphatase Methyltrn_RNA_3 PF02598.17 BAJ50408.1 - 3e-51 174.6 0.0 3.4e-51 174.5 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methyltransferase SpoU_methylase PF00588.19 BAJ50408.1 - 0.012 15.7 0.0 0.15 12.2 0.0 2.3 2 0 0 2 2 2 0 SpoU rRNA Methylase family APC_N_CC PF16689.5 BAJ50408.1 - 0.099 12.7 0.0 0.23 11.6 0.0 1.5 1 0 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain Archease PF01951.16 BAJ50409.1 - 3.2e-34 118.1 0.3 3.5e-34 118.0 0.3 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) HEPN PF05168.14 BAJ50410.1 - 2.4e-20 72.8 1.7 2.8e-20 72.6 1.7 1.1 1 0 0 1 1 1 1 HEPN domain NICE-3 PF07406.11 BAJ50410.1 - 0.01 15.8 0.2 0.011 15.7 0.2 1.3 1 1 0 1 1 1 0 NICE-3 protein Cytochrom_D1 PF02239.16 BAJ50410.1 - 0.16 10.5 0.0 0.2 10.1 0.0 1.1 1 0 0 1 1 1 0 Cytochrome D1 heme domain NTP_transf_2 PF01909.23 BAJ50411.1 - 9.9e-10 38.6 0.0 1.2e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ50411.1 - 4.9e-07 29.8 0.0 5.6e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF5305 PF17231.2 BAJ50412.1 - 0.035 13.5 1.4 0.075 12.4 1.4 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Collectrin PF16959.5 BAJ50412.1 - 0.095 12.5 0.3 0.16 11.7 0.3 1.3 1 0 0 1 1 1 0 Renal amino acid transporter 7TMR-DISMED2 PF07696.11 BAJ50412.1 - 0.12 12.5 0.0 1.6 8.8 0.0 2.3 2 0 0 2 2 2 0 7TMR-DISM extracellular 2 CarboxypepD_reg PF13620.6 BAJ50413.1 - 3e-12 46.6 23.3 5.5e-07 29.8 1.9 7.0 8 0 0 8 8 8 3 Carboxypeptidase regulatory-like domain Big_1 PF02369.16 BAJ50413.1 - 1.2e-05 25.2 18.7 0.094 12.7 1.2 7.6 6 1 1 7 7 7 3 Bacterial Ig-like domain (group 1) SdrD_B PF17210.3 BAJ50413.1 - 0.0083 16.3 3.1 0.054 13.7 0.1 3.3 3 0 0 3 3 3 1 SdrD B-like domain bMG3 PF11974.8 BAJ50413.1 - 0.0097 15.9 1.9 0.13 12.3 0.1 3.2 3 0 0 3 3 3 1 Bacterial alpha-2-macroglobulin MG3 domain DUF824 PF05688.11 BAJ50413.1 - 0.051 13.4 3.3 12 5.9 0.1 5.0 4 0 0 4 4 4 0 Salmonella repeat of unknown function (DUF824) MG4 PF17789.1 BAJ50413.1 - 0.087 13.0 0.7 3.8 7.7 0.0 3.6 3 0 0 3 3 3 0 Macroglobulin domain MG4 Invasin_D3 PF09134.10 BAJ50413.1 - 0.18 12.1 9.8 8.5 6.8 0.2 5.7 4 1 1 5 5 5 0 Invasin, domain 3 PIN PF01850.21 BAJ50414.1 - 5.8e-12 46.2 0.1 6.7e-12 46.0 0.1 1.0 1 0 0 1 1 1 1 PIN domain RHH_3 PF12651.7 BAJ50415.1 - 0.0068 16.4 0.0 0.013 15.4 0.0 1.6 1 1 0 1 1 1 1 Ribbon-helix-helix domain VAPB_antitox PF02697.14 BAJ50416.1 - 9.9e-21 74.3 0.3 1.1e-20 74.1 0.3 1.0 1 0 0 1 1 1 1 Putative antitoxin PIN PF01850.21 BAJ50417.1 - 4.6e-16 59.4 0.5 5.1e-16 59.3 0.5 1.0 1 0 0 1 1 1 1 PIN domain N6_N4_Mtase PF01555.18 BAJ50419.1 - 3.7e-16 59.5 0.0 8.1e-07 29.0 0.0 2.6 3 0 0 3 3 3 2 DNA methylase UPF0020 PF01170.18 BAJ50419.1 - 1.5e-07 31.3 0.0 0.0019 17.9 0.0 2.4 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 BAJ50419.1 - 1.4e-05 25.7 0.0 0.081 13.6 0.0 3.2 3 0 0 3 3 3 2 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ50419.1 - 0.0029 18.3 0.0 6.3 7.6 0.0 3.3 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAJ50419.1 - 0.15 11.9 0.0 0.59 10.0 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_8 PF05148.15 BAJ50419.1 - 0.16 11.8 0.1 19 5.0 0.0 2.5 3 0 0 3 3 3 0 Hypothetical methyltransferase Methyltransf_31 PF13847.6 BAJ50419.1 - 0.17 11.7 0.0 0.46 10.3 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain MethyltransfD12 PF02086.15 BAJ50419.1 - 0.23 11.1 0.0 0.38 10.4 0.0 1.3 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase Pribosyltran PF00156.27 BAJ50420.1 - 1.7e-07 30.9 0.2 2.7e-07 30.3 0.2 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PfkB PF00294.24 BAJ50423.1 - 4.2e-52 177.3 0.0 4.8e-52 177.1 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase DHDPS PF00701.22 BAJ50424.1 - 3.1e-52 177.1 0.0 3.6e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family adh_short_C2 PF13561.6 BAJ50425.1 - 6.8e-54 182.9 0.0 7.8e-54 182.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 BAJ50425.1 - 5.6e-50 169.5 0.1 6.4e-50 169.3 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 BAJ50425.1 - 7.7e-11 42.2 0.0 1e-10 41.9 0.0 1.1 1 0 0 1 1 1 1 KR domain Peptidase_M20 PF01546.28 BAJ50426.1 - 2.4e-11 43.8 0.1 5.8e-11 42.5 0.1 1.7 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 BAJ50426.1 - 7.5e-10 38.7 0.0 1.3e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Ald_Xan_dh_C2 PF02738.18 BAJ50427.1 - 6.3e-184 612.5 0.0 7.3e-184 612.3 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50427.1 - 2.7e-20 72.8 0.0 5e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PyrI PF01948.18 BAJ50428.1 - 6e-26 90.5 1.5 1.4e-25 89.3 0.2 2.0 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain Pribosyltran PF00156.27 BAJ50428.1 - 1.6e-09 37.5 0.0 2.9e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 BAJ50428.1 - 2.3e-06 27.2 0.1 3.8e-06 26.5 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase PyrI_C PF02748.15 BAJ50428.1 - 0.0064 16.4 0.5 0.013 15.4 0.5 1.5 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain UPRTase PF14681.6 BAJ50428.1 - 0.043 13.3 0.1 0.07 12.6 0.1 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase OMPdecase PF00215.24 BAJ50429.1 - 2.5e-22 79.6 0.0 3e-22 79.3 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Aldedh PF00171.22 BAJ50430.1 - 5.6e-141 470.2 0.0 7e-141 469.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family SPW PF03779.14 BAJ50430.1 - 0.017 14.7 1.6 0.041 13.5 1.6 1.6 1 0 0 1 1 1 0 SPW repeat Bac_luciferase PF00296.20 BAJ50431.1 - 2e-54 185.2 0.0 2.4e-54 184.9 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Rsbr_N PF08678.10 BAJ50431.1 - 0.035 14.2 0.0 0.079 13.0 0.0 1.5 1 0 0 1 1 1 0 Rsbr N terminal Peripla_BP_6 PF13458.6 BAJ50432.1 - 2.9e-61 208.0 0.0 3.8e-61 207.7 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 BAJ50432.1 - 1.2e-15 57.4 0.2 3.6e-15 55.8 0.2 1.7 1 1 0 1 1 1 1 Periplasmic binding protein domain ANF_receptor PF01094.28 BAJ50432.1 - 1.6e-12 47.2 0.0 2.3e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region PAP2 PF01569.21 BAJ50432.1 - 0.11 12.2 0.0 0.11 12.2 0.0 1.7 2 0 0 2 2 2 0 PAP2 superfamily BPD_transp_2 PF02653.16 BAJ50433.1 - 7e-33 113.9 44.2 8e-33 113.7 44.2 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 BAJ50434.1 - 3.6e-37 128.0 32.1 4.9e-37 127.5 32.1 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Pam17 PF08566.10 BAJ50434.1 - 0.44 10.4 7.1 5 6.9 0.2 2.5 2 1 0 2 2 2 0 Mitochondrial import protein Pam17 ABC_tran PF00005.27 BAJ50435.1 - 6.7e-34 117.3 0.0 8.6e-34 117.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50435.1 - 3.4e-13 50.1 0.0 1.4e-06 28.3 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 BAJ50435.1 - 0.00014 21.7 0.0 0.0031 17.3 0.0 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 BAJ50435.1 - 0.00016 21.3 0.1 0.0003 20.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 BAJ50435.1 - 0.00063 19.3 0.0 0.0026 17.3 0.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAJ50435.1 - 0.00068 19.9 0.1 0.0022 18.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 BAJ50435.1 - 0.0022 17.9 0.0 0.0035 17.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 BAJ50435.1 - 0.004 17.6 0.0 0.006 17.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 BAJ50435.1 - 0.0042 17.6 0.1 0.0075 16.8 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 BAJ50435.1 - 0.0089 15.8 0.0 0.012 15.3 0.0 1.3 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 BAJ50435.1 - 0.0094 16.0 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 BAJ50435.1 - 0.012 15.7 0.2 0.034 14.2 0.2 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_27 PF13514.6 BAJ50435.1 - 0.014 15.0 0.1 0.065 12.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 BAJ50435.1 - 0.027 13.4 0.0 0.04 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain Mg_chelatase PF01078.21 BAJ50435.1 - 0.037 13.4 0.0 0.056 12.8 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 BAJ50435.1 - 0.041 13.6 0.1 0.079 12.7 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 BAJ50435.1 - 0.045 14.3 0.2 0.12 12.9 0.0 1.9 2 1 0 2 2 1 0 AAA domain AAA_33 PF13671.6 BAJ50435.1 - 0.049 13.8 0.1 0.12 12.5 0.1 1.8 2 1 0 2 2 2 0 AAA domain PIF1 PF05970.14 BAJ50435.1 - 0.058 12.6 0.0 0.077 12.2 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase cobW PF02492.19 BAJ50435.1 - 0.066 12.8 0.3 0.68 9.5 0.1 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Guanylate_kin PF00625.21 BAJ50435.1 - 0.12 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Guanylate kinase NACHT PF05729.12 BAJ50435.1 - 0.13 12.2 0.1 0.52 10.2 0.1 2.0 2 0 0 2 2 2 0 NACHT domain Dynamin_N PF00350.23 BAJ50435.1 - 0.13 12.3 0.1 0.31 11.1 0.1 1.7 1 1 0 1 1 1 0 Dynamin family ABC_ATPase PF09818.9 BAJ50435.1 - 0.15 10.8 0.1 0.76 8.5 0.1 1.9 2 0 0 2 2 2 0 Predicted ATPase of the ABC class ABC_tran PF00005.27 BAJ50436.1 - 1.2e-29 103.5 0.0 2.1e-29 102.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50436.1 - 2.9e-10 40.5 1.8 1.7e-05 24.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 BAJ50436.1 - 1.3e-05 25.0 0.0 3.3e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_29 PF13555.6 BAJ50436.1 - 0.00073 19.2 0.0 0.019 14.7 0.0 2.3 2 0 0 2 2 2 1 P-loop containing region of AAA domain SMC_N PF02463.19 BAJ50436.1 - 0.0013 18.2 0.2 0.13 11.7 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAJ50436.1 - 0.006 17.1 0.0 0.0081 16.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 BAJ50436.1 - 0.013 16.0 0.0 0.061 13.7 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 BAJ50436.1 - 0.03 14.0 0.0 0.75 9.4 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain RsgA_GTPase PF03193.16 BAJ50436.1 - 0.039 13.9 0.0 0.091 12.7 0.0 1.6 2 0 0 2 2 2 0 RsgA GTPase AAA_16 PF13191.6 BAJ50436.1 - 0.088 13.2 0.0 0.15 12.4 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain ATPase_2 PF01637.18 BAJ50436.1 - 0.11 12.4 0.0 0.2 11.5 0.0 1.6 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea Baculo_LEF-10 PF07206.11 BAJ50436.1 - 0.12 12.5 0.0 0.28 11.4 0.0 1.6 1 0 0 1 1 1 0 Baculovirus late expression factor 10 (LEF-10) AAA_30 PF13604.6 BAJ50436.1 - 0.15 11.8 0.0 0.25 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 BAJ50436.1 - 0.19 11.7 0.0 0.33 10.9 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IRF-3 PF10401.9 BAJ50436.1 - 0.2 11.4 0.0 0.39 10.5 0.0 1.4 1 0 0 1 1 1 0 Interferon-regulatory factor 3 HEPN PF05168.14 BAJ50437.1 - 1.1e-20 73.9 0.4 1.2e-20 73.8 0.4 1.0 1 0 0 1 1 1 1 HEPN domain NTP_transf_2 PF01909.23 BAJ50438.1 - 3.6e-12 46.4 0.1 4.6e-12 46.1 0.1 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ50438.1 - 2.2e-08 34.1 0.0 2.8e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 BAJ50438.1 - 5.4e-06 26.6 0.1 6.7e-06 26.3 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase beta palm ParE_toxin PF05016.15 BAJ50440.1 - 4.4e-06 27.2 2.7 5.9e-06 26.8 2.7 1.2 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE DUF211 PF02680.14 BAJ50441.1 - 8.1e-30 102.8 0.6 9.2e-30 102.7 0.6 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 RVT_3 PF13456.6 BAJ50441.1 - 0.0087 15.9 0.0 0.0093 15.8 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase-like HMA PF00403.26 BAJ50441.1 - 0.058 13.9 1.1 0.24 11.9 1.1 2.0 1 1 0 1 1 1 0 Heavy-metal-associated domain Amino_oxidase PF01593.24 BAJ50442.1 - 5.6e-33 114.9 0.0 7e-33 114.6 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 BAJ50442.1 - 1.9e-14 53.6 1.1 3.8e-14 52.7 0.3 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 BAJ50442.1 - 1e-10 41.8 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 BAJ50442.1 - 1.8e-08 34.2 0.1 6.7e-07 29.0 0.0 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 BAJ50442.1 - 4.9e-08 32.6 0.3 1.5e-05 24.4 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 BAJ50442.1 - 2.6e-06 26.4 5.7 0.0026 16.5 2.7 2.2 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox PF00070.27 BAJ50442.1 - 2.9e-06 27.7 6.3 0.0025 18.3 3.0 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 BAJ50442.1 - 5.1e-06 25.8 6.6 1.6e-05 24.2 3.7 2.1 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 BAJ50442.1 - 0.0011 18.2 0.4 0.002 17.4 0.4 1.3 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 BAJ50442.1 - 0.0019 17.5 1.6 0.003 16.9 1.6 1.2 1 0 0 1 1 1 1 FAD binding domain AlaDh_PNT_C PF01262.21 BAJ50442.1 - 0.0072 15.7 2.9 0.013 14.8 2.9 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 BAJ50442.1 - 0.028 14.0 0.1 0.056 13.0 0.1 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 BAJ50442.1 - 0.037 13.9 1.9 0.074 12.9 1.9 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FMO-like PF00743.19 BAJ50442.1 - 0.057 11.8 0.1 0.1 11.0 0.1 1.3 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like NAD_binding_9 PF13454.6 BAJ50442.1 - 0.059 13.4 2.9 0.86 9.6 0.7 2.8 2 1 0 2 2 2 0 FAD-NAD(P)-binding GIDA PF01134.22 BAJ50442.1 - 0.066 12.3 7.6 0.065 12.3 4.6 2.3 3 0 0 3 3 3 0 Glucose inhibited division protein A MCRA PF06100.11 BAJ50442.1 - 0.1 11.3 0.4 0.31 9.8 0.0 1.8 2 0 0 2 2 2 0 MCRA family Trp_halogenase PF04820.14 BAJ50442.1 - 0.28 10.0 2.0 0.45 9.3 2.0 1.3 1 0 0 1 1 1 0 Tryptophan halogenase ApbA PF02558.16 BAJ50442.1 - 0.37 10.4 1.3 0.73 9.5 1.3 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_3 PF13738.6 BAJ50442.1 - 1.6 7.9 4.3 0.56 9.4 0.9 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase SQS_PSY PF00494.19 BAJ50443.1 - 4.7e-43 147.6 0.0 5.5e-43 147.4 0.0 1.0 1 0 0 1 1 1 1 Squalene/phytoene synthase EF-hand_13 PF17958.1 BAJ50443.1 - 0.13 12.1 0.0 0.4 10.5 0.0 1.9 1 0 0 1 1 1 0 EF-hand domain Peptidase_C9 PF01707.16 BAJ50443.1 - 0.15 11.6 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 Peptidase family C9 UbiA PF01040.18 BAJ50444.1 - 1.3e-29 103.2 12.9 1.7e-29 102.9 12.9 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Cornichon PF03311.14 BAJ50444.1 - 0.078 13.3 3.1 1.6 9.0 0.1 2.3 2 0 0 2 2 2 0 Cornichon protein Adenosine_kin PF04008.14 BAJ50446.1 - 3.6e-73 244.5 0.1 4.1e-73 244.3 0.1 1.0 1 0 0 1 1 1 1 Adenosine specific kinase polyprenyl_synt PF00348.17 BAJ50447.1 - 1.6e-64 217.4 0.0 2e-64 217.1 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Nitroreductase PF00881.24 BAJ50448.1 - 5.1e-11 42.9 0.9 4.2e-09 36.7 0.4 2.5 2 1 0 2 2 2 1 Nitroreductase family Tubulin PF00091.25 BAJ50449.1 - 9.5e-41 140.2 0.1 2.6e-40 138.7 0.1 1.8 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 BAJ50449.1 - 2.3e-24 85.5 0.0 9.6e-24 83.5 0.0 2.1 1 0 0 1 1 1 1 FtsZ family, C-terminal domain NAD_binding_10 PF13460.6 BAJ50449.1 - 0.0017 18.3 0.0 0.0031 17.4 0.0 1.5 1 0 0 1 1 1 1 NAD(P)H-binding Tubulin_2 PF13809.6 BAJ50449.1 - 0.13 11.4 7.4 0.64 9.1 2.0 2.7 1 1 1 2 2 2 0 Tubulin like RHH_1 PF01402.21 BAJ50450.1 - 5.3e-08 32.5 0.0 7.2e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 BAJ50450.1 - 0.031 14.5 0.0 0.044 13.9 0.0 1.2 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family Toprim_4 PF13662.6 BAJ50451.1 - 0.00043 20.7 0.0 0.0034 17.8 0.0 2.1 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 BAJ50451.1 - 0.00099 19.5 0.0 0.0014 19.0 0.0 1.3 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 BAJ50451.1 - 0.003 17.8 0.0 0.061 13.5 0.0 2.1 1 1 1 2 2 2 1 Toprim domain GXGXG PF01493.19 BAJ50452.1 - 1.5e-26 93.1 7.2 2.6e-26 92.4 7.2 1.3 1 0 0 1 1 1 1 GXGXG motif GATase_6 PF13522.6 BAJ50452.1 - 2.7e-08 34.1 0.0 3.2e-07 30.6 0.0 2.5 2 1 0 2 2 2 1 Glutamine amidotransferase domain GATase_2 PF00310.21 BAJ50452.1 - 2.2e-07 30.0 0.1 0.00012 21.0 0.1 2.2 1 1 0 1 1 1 1 Glutamine amidotransferases class-II GATase_4 PF13230.6 BAJ50452.1 - 0.0021 17.0 0.0 0.0036 16.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_7 PF13537.6 BAJ50452.1 - 0.021 14.7 0.0 0.11 12.4 0.0 2.0 1 1 0 1 1 1 0 Glutamine amidotransferase domain Flavi_NS2B PF01002.19 BAJ50452.1 - 0.095 12.6 0.2 0.23 11.3 0.2 1.6 1 0 0 1 1 1 0 Flavivirus non-structural protein NS2B Glu_syn_central PF04898.14 BAJ50453.1 - 2.3e-08 33.9 0.1 0.0059 16.1 0.0 2.1 2 0 0 2 2 2 2 Glutamate synthase central domain Glu_synthase PF01645.17 BAJ50453.1 - 0.00021 20.6 0.1 0.0051 16.0 0.2 2.6 2 1 1 3 3 3 1 Conserved region in glutamate synthase FMN_dh PF01070.18 BAJ50453.1 - 0.041 12.9 0.3 0.061 12.3 0.3 1.4 1 0 0 1 1 1 0 FMN-dependent dehydrogenase TauE PF01925.19 BAJ50454.1 - 4.1e-39 134.6 40.7 4.9e-39 134.4 40.7 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF1634 PF07843.11 BAJ50455.1 - 1.9e-18 66.4 5.8 2.2e-18 66.2 5.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1634) Phage_holin_3_6 PF07332.11 BAJ50455.1 - 8.1 6.5 9.8 12 5.9 4.5 2.0 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Rieske PF00355.26 BAJ50456.1 - 1.9e-09 37.3 0.0 3.4e-09 36.5 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain N6_N4_Mtase PF01555.18 BAJ50458.1 - 4.1e-26 92.1 0.1 1.3e-12 48.0 0.0 2.1 2 0 0 2 2 2 2 DNA methylase UPF0020 PF01170.18 BAJ50458.1 - 2.4e-07 30.7 0.1 0.003 17.3 0.0 2.2 1 1 1 2 2 2 2 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 BAJ50458.1 - 1.7e-05 25.4 0.0 0.00014 22.5 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ50458.1 - 0.003 18.2 0.0 0.072 13.8 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain Thioredoxin_3 PF13192.6 BAJ50459.1 - 4e-09 36.4 1.2 9.6e-09 35.2 1.2 1.7 1 1 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 BAJ50459.1 - 2e-06 27.9 0.0 2.8e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_4 PF13462.6 BAJ50459.1 - 0.0012 19.0 0.5 0.0087 16.2 0.0 2.0 1 1 1 2 2 2 1 Thioredoxin Thioredoxin PF00085.20 BAJ50459.1 - 0.0049 16.8 0.3 0.41 10.7 0.1 2.2 1 1 1 2 2 2 2 Thioredoxin GST_N_3 PF13417.6 BAJ50459.1 - 0.0053 17.1 0.0 0.0073 16.7 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.6 BAJ50459.1 - 0.012 16.1 1.6 0.6 10.6 1.8 2.7 1 1 1 2 2 2 0 Thioredoxin-like domain GST_N_2 PF13409.6 BAJ50459.1 - 0.15 12.3 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain SNARE_assoc PF09335.11 BAJ50460.1 - 4.7e-10 40.0 11.1 8.7e-08 32.7 8.8 3.0 2 1 0 2 2 2 2 SNARE associated Golgi protein DUF1230 PF06799.11 BAJ50460.1 - 0.42 10.7 2.5 0.52 10.4 1.1 1.8 2 0 0 2 2 2 0 Conserved in the green lineage and diatoms 27 DUF4147 PF13660.6 BAJ50461.1 - 7.3e-68 228.5 0.0 1e-67 228.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MOFRL PF05161.13 BAJ50461.1 - 2.4e-37 127.4 0.4 4.5e-37 126.6 0.4 1.5 1 0 0 1 1 1 1 MOFRL family NBD_C PF17042.5 BAJ50461.1 - 0.12 12.9 0.4 0.12 12.9 0.4 2.2 2 1 0 2 2 2 0 Nucleotide-binding C-terminal domain DS PF01916.17 BAJ50462.1 - 1.9e-84 283.4 0.0 2.1e-84 283.2 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase LDcluster4 PF18306.1 BAJ50463.1 - 1.6e-24 86.3 0.0 1.7e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 SLOG cluster4 family Lysine_decarbox PF03641.14 BAJ50463.1 - 2.3e-05 24.5 0.0 5e-05 23.4 0.0 1.6 1 1 0 1 1 1 1 Possible lysine decarboxylase LSDAT_prok PF18171.1 BAJ50463.1 - 0.0055 16.0 0.1 0.023 13.9 0.0 1.9 2 0 0 2 2 2 1 SLOG in TRPM, prokaryote DAGK_cat PF00781.24 BAJ50463.1 - 0.0098 15.5 0.1 0.18 11.4 0.1 2.2 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain LSDAT_euk PF18139.1 BAJ50463.1 - 0.012 15.0 0.0 0.018 14.4 0.0 1.3 1 1 0 1 1 1 0 SLOG in TRPM Topoisom_bac PF01131.20 BAJ50464.1 - 2.9e-75 253.8 0.0 4.2e-75 253.3 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 BAJ50464.1 - 9.3e-21 74.0 0.0 4e-20 72.0 0.0 2.2 2 0 0 2 2 1 1 Toprim domain DEAD PF00270.29 BAJ50464.1 - 9.1e-13 48.3 0.0 6.2e-12 45.6 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAJ50464.1 - 2e-08 34.5 0.0 0.024 15.0 0.0 3.9 4 0 0 4 4 3 2 Helicase conserved C-terminal domain zf_Rg PF17915.1 BAJ50464.1 - 4.1e-07 29.3 6.5 6.7e-07 28.6 0.8 3.1 3 0 0 3 3 3 1 Reverse gyrase zinc finger ResIII PF04851.15 BAJ50464.1 - 6.3e-07 29.6 0.1 2.1e-06 27.9 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit PhoH PF02562.16 BAJ50464.1 - 0.00022 20.7 0.0 0.00043 19.8 0.0 1.4 1 0 0 1 1 1 1 PhoH-like protein zf-C4pol PF14260.6 BAJ50464.1 - 0.0017 18.8 0.8 0.45 11.0 0.2 2.5 2 0 0 2 2 2 1 C4-type zinc-finger of DNA polymerase delta zf-ribbon_3 PF13248.6 BAJ50464.1 - 0.0065 15.8 8.6 0.048 13.1 3.1 2.4 2 0 0 2 2 2 1 zinc-ribbon domain DUF35_N PF12172.8 BAJ50464.1 - 0.0099 15.7 5.2 0.015 15.2 1.0 2.5 2 0 0 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DZR PF12773.7 BAJ50464.1 - 0.032 14.2 5.1 0.51 10.4 0.7 2.4 2 0 0 2 2 2 0 Double zinc ribbon SecA_DEAD PF07517.14 BAJ50464.1 - 0.033 13.5 0.0 0.06 12.6 0.0 1.5 1 0 0 1 1 1 0 SecA DEAD-like domain DUF1272 PF06906.11 BAJ50464.1 - 0.051 13.7 3.9 6.7 6.9 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) HypA PF01155.19 BAJ50464.1 - 0.099 12.7 4.1 1.2 9.2 0.5 2.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF1400 PF07176.11 BAJ50464.1 - 0.11 12.8 0.0 3.6 7.9 0.0 3.0 3 0 0 3 3 2 0 Alpha/beta hydrolase of unknown function (DUF1400) VATC PF18716.1 BAJ50464.1 - 0.11 12.4 0.6 0.24 11.3 0.6 1.6 1 0 0 1 1 1 0 Vms1-associating treble clef domain AAA_30 PF13604.6 BAJ50464.1 - 0.15 11.7 0.0 0.42 10.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain BRI3BP PF14965.6 BAJ50464.1 - 0.16 11.5 0.0 16 4.9 0.0 2.4 2 0 0 2 2 2 0 Negative regulator of p53/TP53 CbiA PF01656.23 BAJ50464.1 - 0.16 12.0 0.1 2.5 8.1 0.1 2.8 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain zf-FPG_IleRS PF06827.14 BAJ50464.1 - 0.18 11.7 3.5 0.59 10.1 0.2 2.7 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS zinc-ribbons_6 PF07191.12 BAJ50464.1 - 0.22 11.5 5.3 0.21 11.6 1.2 2.3 2 0 0 2 2 2 0 zinc-ribbons TackOD1 PF18551.1 BAJ50464.1 - 0.27 10.9 2.2 0.47 10.1 0.1 2.2 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 RecR PF02132.15 BAJ50464.1 - 0.41 10.3 12.6 0.056 13.0 2.2 3.2 3 0 0 3 3 3 0 RecR protein Zn-ribbon_8 PF09723.10 BAJ50464.1 - 0.47 10.6 5.0 5 7.3 2.7 2.7 2 0 0 2 2 2 0 Zinc ribbon domain Prim_Zn_Ribbon PF08273.12 BAJ50464.1 - 0.5 10.7 4.4 0.28 11.5 0.7 2.5 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase Aconitase PF00330.20 BAJ50465.1 - 3.3e-151 504.4 0.0 3.7e-151 504.2 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 BAJ50465.1 - 2.1e-05 23.4 0.0 3.9e-05 22.5 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF521) ParBc PF02195.18 BAJ50466.1 - 1e-15 57.8 0.2 1.8e-15 57.0 0.2 1.4 1 0 0 1 1 1 1 ParB-like nuclease domain HTH_17 PF12728.7 BAJ50466.1 - 0.00015 21.9 0.0 0.00036 20.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_1 PF01527.20 BAJ50466.1 - 0.00028 21.1 0.1 0.00081 19.7 0.1 1.8 1 0 0 1 1 1 1 Transposase HTH_23 PF13384.6 BAJ50466.1 - 0.0015 18.2 0.0 0.0047 16.7 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain GPP34 PF05719.11 BAJ50466.1 - 0.0018 18.3 0.1 0.026 14.5 0.1 2.1 1 1 1 2 2 2 1 Golgi phosphoprotein 3 (GPP34) HTH_29 PF13551.6 BAJ50466.1 - 0.014 15.4 0.0 0.034 14.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix HTH_22 PF13309.6 BAJ50466.1 - 0.034 14.2 0.2 4 7.6 0.0 2.7 2 0 0 2 2 2 0 HTH domain DUF1778 PF08681.11 BAJ50466.1 - 0.056 13.4 0.1 0.13 12.2 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1778) ABC_tran PF00005.27 BAJ50468.1 - 1.3e-07 32.2 0.0 0.0036 17.8 0.0 2.3 1 1 1 2 2 2 2 ABC transporter Acetyltransf_1 PF00583.25 BAJ50468.1 - 2.7e-05 24.4 0.0 0.00014 22.1 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 BAJ50468.1 - 0.0002 21.7 0.0 0.00049 20.5 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF3798 PF12683.7 BAJ50468.1 - 0.00043 19.8 0.0 0.00087 18.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3798) AAA_22 PF13401.6 BAJ50468.1 - 0.00049 20.4 0.0 0.0018 18.6 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ50468.1 - 0.00092 19.6 0.1 0.0044 17.4 0.1 2.1 1 1 1 2 2 2 1 AAA ATPase domain Acetyltransf_CG PF14542.6 BAJ50468.1 - 0.0016 18.5 0.0 0.0035 17.4 0.0 1.6 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_10 PF13673.7 BAJ50468.1 - 0.0084 16.0 0.0 0.019 14.9 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PIF1 PF05970.14 BAJ50468.1 - 0.02 14.1 0.0 0.03 13.5 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase Acetyltransf_15 PF17013.5 BAJ50468.1 - 0.022 14.2 0.0 0.044 13.3 0.0 1.4 1 0 0 1 1 1 0 Putative acetyl-transferase NACHT PF05729.12 BAJ50468.1 - 0.027 14.4 0.0 0.063 13.2 0.0 1.6 1 0 0 1 1 1 0 NACHT domain Acetyltransf_9 PF13527.7 BAJ50468.1 - 0.028 14.5 0.2 0.16 12.1 0.1 2.3 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain ATPase_2 PF01637.18 BAJ50468.1 - 0.04 13.8 0.0 0.081 12.8 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 BAJ50468.1 - 0.075 13.4 0.0 0.25 11.8 0.0 1.8 2 0 0 2 2 2 0 RNA helicase AAA_25 PF13481.6 BAJ50468.1 - 0.086 12.4 0.1 0.32 10.5 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 BAJ50468.1 - 0.1 12.3 0.0 0.22 11.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ50468.1 - 0.11 13.0 0.0 0.32 11.4 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Acetyltransf_13 PF13880.6 BAJ50468.1 - 0.13 12.3 0.0 0.45 10.5 0.0 2.0 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase RsgA_GTPase PF03193.16 BAJ50468.1 - 0.13 12.1 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_19 PF13245.6 BAJ50468.1 - 0.18 12.1 0.0 0.38 11.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain TRC8_N PF13705.6 BAJ50470.1 - 0.0038 16.2 9.2 0.0045 16.0 9.2 1.0 1 0 0 1 1 1 1 TRC8 N-terminal domain Phage_portal PF04860.12 BAJ50471.1 - 1.1e-16 61.0 0.0 1.3e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 Phage portal protein Peptidase_S78 PF04586.17 BAJ50473.1 - 4.5e-07 30.2 0.0 7.2e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Caudovirus prohead serine protease Peptidase_S78_2 PF14550.6 BAJ50473.1 - 0.015 15.4 0.1 0.068 13.3 0.0 2.1 1 1 1 2 2 2 0 Putative phage serine protease XkdF Phage_capsid PF05065.13 BAJ50474.1 - 1e-16 61.1 0.2 1.2e-16 60.9 0.2 1.0 1 0 0 1 1 1 1 Phage capsid family Linocin_M18 PF04454.12 BAJ50474.1 - 0.032 13.5 0.0 0.046 13.0 0.0 1.2 1 0 0 1 1 1 0 Encapsulating protein for peroxidase DUF2460 PF09343.10 BAJ50475.1 - 0.063 12.8 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 2217 (DUF2460) La_HTH_kDCL PF18177.1 BAJ50475.1 - 0.17 12.2 0.0 24 5.3 0.0 2.6 3 0 0 3 3 3 0 La HTH in kinetoplastid DICER domain Peptidase_S8 PF00082.22 BAJ50477.1 - 9.3e-25 87.5 1.9 1.9e-23 83.2 0.7 2.3 1 1 1 2 2 2 2 Subtilase family DUF2001 PF09393.10 BAJ50478.1 - 0.091 12.7 0.0 24 4.9 0.0 2.9 3 0 0 3 3 3 0 Phage tail tube protein DUF3323 PF11796.8 BAJ50479.1 - 0.015 15.2 0.2 0.017 15.0 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) DUF3750 PF12570.8 BAJ50479.1 - 0.071 13.8 0.0 0.081 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3750) HK97-gp10_like PF04883.12 BAJ50480.1 - 9.9e-15 55.3 0.2 2.2e-14 54.2 0.2 1.5 2 0 0 2 2 2 1 Bacteriophage HK97-gp10, putative tail-component DUF5403 PF17395.2 BAJ50480.1 - 0.00035 20.8 0.0 0.00046 20.4 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5403) CbiJ PF02571.14 BAJ50480.1 - 0.014 14.9 0.0 0.017 14.6 0.0 1.1 1 0 0 1 1 1 0 Precorrin-6x reductase CbiJ/CobK Minor_capsid_2 PF11114.8 BAJ50480.1 - 0.15 12.1 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Minor capsid protein SNase PF00565.17 BAJ50481.1 - 1.3e-12 48.2 0.0 1.9e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Staphylococcal nuclease homologue SepF PF04472.12 BAJ50481.1 - 0.069 13.4 0.1 0.14 12.4 0.1 1.5 1 0 0 1 1 1 0 Cell division protein SepF DUF4731 PF15875.5 BAJ50481.1 - 0.17 12.1 0.5 0.39 10.9 0.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) PhageMin_Tail PF10145.9 BAJ50482.1 - 4.6e-28 98.4 12.0 4.6e-28 98.4 12.0 5.4 2 2 2 4 4 4 1 Phage-related minor tail protein MarR_2 PF12802.7 BAJ50482.1 - 0.1 12.5 2.0 0.53 10.2 0.5 3.1 2 0 0 2 2 2 0 MarR family DUF2520 PF10728.9 BAJ50482.1 - 0.67 9.7 6.9 0.44 10.3 0.9 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF2520) Sipho_Gp37 PF14594.6 BAJ50483.1 - 0.005 15.9 0.0 3.2 6.7 0.0 3.0 2 1 0 2 2 2 2 Siphovirus ReqiPepy6 Gp37-like protein DUF5038 PF16441.5 BAJ50484.1 - 0.037 14.1 0.9 0.071 13.1 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF5038) Ig_mannosidase PF17753.1 BAJ50484.1 - 0.057 13.2 0.3 0.13 12.1 0.3 1.6 1 0 0 1 1 1 0 Ig-fold domain Peptidase_S74 PF13884.6 BAJ50485.1 - 0.00019 21.7 0.0 0.00032 20.9 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase bZIP_2 PF07716.15 BAJ50485.1 - 0.046 13.8 3.0 0.11 12.7 3.0 1.7 1 0 0 1 1 1 0 Basic region leucine zipper Chibby PF14645.6 BAJ50485.1 - 0.046 14.1 0.1 0.092 13.2 0.1 1.5 1 0 0 1 1 1 0 Chibby family bZIP_1 PF00170.21 BAJ50485.1 - 0.047 13.8 2.7 0.1 12.7 2.7 1.5 1 0 0 1 1 1 0 bZIP transcription factor HAP1_N PF04849.13 BAJ50485.1 - 0.051 12.8 0.5 0.069 12.3 0.5 1.2 1 0 0 1 1 1 0 HAP1 N-terminal conserved region BDV_G PF06208.11 BAJ50485.1 - 0.19 10.9 0.0 0.23 10.6 0.0 1.1 1 0 0 1 1 1 0 Borna disease virus G protein DivIC PF04977.15 BAJ50485.1 - 0.31 10.9 1.9 0.55 10.0 1.9 1.4 1 0 0 1 1 1 0 Septum formation initiator Terminase_6 PF03237.15 BAJ50487.1 - 1.5e-13 50.9 0.0 4.9e-13 49.2 0.0 1.9 2 1 0 2 2 2 1 Terminase-like family Terminase_6C PF17289.2 BAJ50487.1 - 1.3e-08 35.1 0.0 4.1e-08 33.5 0.0 1.8 2 0 0 2 2 2 1 Terminase RNaseH-like domain Helicase_RecD PF05127.14 BAJ50487.1 - 0.0012 18.7 0.1 0.004 17.0 0.0 1.8 2 0 0 2 2 2 1 Helicase Terminase_1 PF03354.15 BAJ50487.1 - 0.0013 17.4 0.0 0.88 8.0 0.0 2.1 2 0 0 2 2 2 2 Phage Terminase Aldo_ket_red PF00248.21 BAJ50488.1 - 2.3e-72 243.7 0.0 3.7e-72 243.0 0.0 1.3 1 1 0 1 1 1 1 Aldo/keto reductase family ABC2_membrane PF01061.24 BAJ50489.1 - 3.2e-32 111.7 24.2 3.2e-32 111.7 24.2 1.7 2 1 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 BAJ50489.1 - 4.2e-10 39.2 24.2 4.2e-10 39.2 24.2 1.6 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 BAJ50489.1 - 4.7e-07 29.4 20.3 7e-07 28.8 20.3 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein PNTB_4TM PF12769.7 BAJ50489.1 - 0.037 14.5 6.7 0.17 12.3 0.6 3.3 3 1 0 3 3 3 0 4TM region of pyridine nucleotide transhydrogenase, mitoch ABC2_membrane_4 PF12730.7 BAJ50489.1 - 0.35 10.8 12.2 1.8 8.5 12.1 2.3 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.27 BAJ50490.1 - 5.3e-30 104.7 0.0 7.2e-30 104.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50490.1 - 9.8e-12 45.3 1.7 6.2e-08 32.8 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 BAJ50490.1 - 1.9e-11 44.5 0.0 4.4e-11 43.4 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 BAJ50490.1 - 0.00014 22.4 0.1 0.00022 21.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 BAJ50490.1 - 0.0079 15.9 0.2 0.015 15.0 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SRP54 PF00448.22 BAJ50490.1 - 0.011 15.4 0.2 0.019 14.6 0.2 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_27 PF13514.6 BAJ50490.1 - 0.015 14.9 0.2 0.028 14.0 0.2 1.4 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 BAJ50490.1 - 0.044 13.5 0.0 0.77 9.4 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain MMR_HSR1 PF01926.23 BAJ50490.1 - 0.064 13.3 0.0 0.16 12.1 0.0 1.8 1 1 1 2 2 2 0 50S ribosome-binding GTPase AAA PF00004.29 BAJ50490.1 - 0.08 13.4 0.3 1.1 9.7 0.3 2.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) GTP_EFTU PF00009.27 BAJ50490.1 - 0.18 11.3 0.0 0.34 10.4 0.0 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain PadR PF03551.14 BAJ50491.1 - 4.6e-19 68.1 0.0 7.4e-19 67.5 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 BAJ50491.1 - 0.0011 19.6 0.0 0.0025 18.4 0.0 1.7 2 0 0 2 2 2 1 Replication terminator protein AphA_like PF14557.6 BAJ50491.1 - 0.0084 15.9 0.1 0.013 15.2 0.1 1.5 1 1 0 1 1 1 1 Putative AphA-like transcriptional regulator FUR PF01475.19 BAJ50491.1 - 0.011 15.8 0.0 0.018 15.2 0.0 1.2 1 0 0 1 1 1 0 Ferric uptake regulator family DUF505 PF04458.12 BAJ50491.1 - 0.012 14.0 0.1 0.02 13.3 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF505) DUF4364 PF14277.6 BAJ50491.1 - 0.037 13.8 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) TrmB PF01978.19 BAJ50491.1 - 0.054 13.4 0.0 0.18 11.7 0.0 1.9 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Replic_Relax PF13814.6 BAJ50491.1 - 0.094 12.8 0.0 0.16 12.0 0.0 1.3 1 1 0 1 1 1 0 Replication-relaxation DUF2274 PF10038.9 BAJ50492.1 - 0.05 14.1 0.1 0.11 13.0 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2274) Putative_PNPOx PF01243.20 BAJ50493.1 - 6.7e-14 51.9 0.0 8.2e-14 51.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 BAJ50493.1 - 0.0024 17.9 0.1 0.003 17.5 0.1 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HTH_IclR PF09339.10 BAJ50494.1 - 8.3e-07 28.7 2.9 1.8e-05 24.5 0.6 2.9 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 BAJ50494.1 - 0.00013 21.9 0.4 0.013 15.5 0.2 2.7 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 BAJ50494.1 - 0.00019 21.7 0.2 1.8 9.0 0.0 3.2 3 1 0 3 3 3 2 Transcriptional regulator HTH_9 PF08221.11 BAJ50494.1 - 0.00099 19.2 0.0 0.0032 17.5 0.0 1.9 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_29 PF13551.6 BAJ50494.1 - 0.0021 18.0 0.2 0.29 11.2 0.1 2.9 3 0 0 3 3 3 1 Winged helix-turn helix MarR_2 PF12802.7 BAJ50494.1 - 0.0047 16.8 2.6 0.92 9.5 0.2 3.2 2 1 1 3 3 3 1 MarR family TrmB PF01978.19 BAJ50494.1 - 0.0056 16.5 0.0 0.48 10.3 0.0 3.2 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 BAJ50494.1 - 0.011 15.7 0.0 9.2 6.3 0.0 3.2 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_5 PF01022.20 BAJ50494.1 - 0.032 14.1 0.0 2.3 8.1 0.0 3.3 4 0 0 4 4 4 0 Bacterial regulatory protein, arsR family MarR PF01047.22 BAJ50494.1 - 0.032 14.2 0.1 0.47 10.4 0.2 2.4 2 0 0 2 2 2 0 MarR family HTH_20 PF12840.7 BAJ50494.1 - 0.045 13.8 0.4 0.99 9.5 0.1 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain FaeA PF04703.12 BAJ50494.1 - 0.085 13.2 0.0 0.4 11.1 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein TEX13 PF15186.6 BAJ50494.1 - 0.35 10.5 1.1 4.3 7.0 0.5 2.1 2 0 0 2 2 2 0 Testis-expressed sequence 13 protein family NTP_transferase PF00483.23 BAJ50495.1 - 3.1e-27 95.7 0.0 4.3e-27 95.3 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 BAJ50495.1 - 9.3e-14 52.1 0.0 1.1e-13 51.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Nre_C PF04895.12 BAJ50495.1 - 0.074 13.0 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 Archaeal Nre, C-terminal ABC_tran PF00005.27 BAJ50496.1 - 1.3e-25 90.5 0.0 1.9e-25 89.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50496.1 - 1.1e-12 48.5 5.4 9.5e-06 25.6 2.8 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 BAJ50496.1 - 1.4e-05 25.0 0.5 0.016 14.9 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 BAJ50496.1 - 0.001 19.3 0.8 0.008 16.5 0.8 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ50496.1 - 0.0015 18.9 1.4 0.0057 17.0 1.4 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 BAJ50496.1 - 0.0076 16.4 0.2 0.024 14.8 0.2 1.9 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 BAJ50496.1 - 0.012 15.1 0.1 3.9 6.9 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_14 PF13173.6 BAJ50496.1 - 0.017 15.1 0.0 0.068 13.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 BAJ50496.1 - 0.018 14.6 0.0 0.034 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 BAJ50496.1 - 0.027 14.1 1.9 0.067 12.8 1.9 1.8 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 BAJ50496.1 - 0.079 13.2 0.1 0.67 10.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 BAJ50496.1 - 0.11 13.0 0.4 2.7 8.4 0.1 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 BAJ50496.1 - 0.15 11.9 0.1 1.5 8.7 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase AAA_23 PF13476.6 BAJ50496.1 - 0.19 12.2 0.0 0.32 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 BAJ50496.1 - 0.21 11.3 0.1 0.46 10.2 0.1 1.5 1 0 0 1 1 1 0 AAA domain FecCD PF01032.18 BAJ50497.1 - 4.9e-76 255.7 38.4 6e-76 255.4 38.4 1.0 1 0 0 1 1 1 1 FecCD transport family Peripla_BP_2 PF01497.18 BAJ50498.1 - 7.8e-23 81.3 0.0 1.2e-22 80.7 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Clathrin_propel PF01394.20 BAJ50498.1 - 0.12 12.8 0.1 0.36 11.2 0.1 1.8 2 0 0 2 2 2 0 Clathrin propeller repeat FtsX PF02687.21 BAJ50498.1 - 0.5 10.9 2.4 4.2 7.9 0.4 2.3 2 0 0 2 2 2 0 FtsX-like permease family FAD_binding_5 PF00941.21 BAJ50499.1 - 3.8e-34 117.9 0.2 5.6e-34 117.3 0.2 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 BAJ50499.1 - 2.5e-12 46.9 0.0 4.8e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.20 BAJ50500.1 - 6.1e-30 103.1 0.0 6.1e-30 103.1 0.0 1.5 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 BAJ50500.1 - 2.8e-10 40.0 2.0 3.9e-10 39.5 0.1 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 BAJ50500.1 - 7.5e-07 29.1 0.6 1.1e-06 28.5 0.1 1.5 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 BAJ50500.1 - 0.012 15.6 0.5 0.072 13.2 0.5 2.2 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Ald_Xan_dh_C2 PF02738.18 BAJ50501.1 - 5.9e-83 279.2 0.0 8.1e-83 278.7 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50501.1 - 2.2e-28 98.8 0.0 3.8e-28 98.0 0.0 1.4 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ald_Xan_dh_C2 PF02738.18 BAJ50502.1 - 2.4e-72 244.1 2.8 2.9e-72 243.9 2.8 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Lactamase_B_3 PF13483.6 BAJ50503.1 - 2.7e-20 72.9 0.0 4.3e-20 72.2 0.0 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 BAJ50503.1 - 1.3e-16 60.7 0.0 1.8e-16 60.3 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 BAJ50503.1 - 8.4e-05 22.7 0.1 0.0002 21.4 0.1 1.6 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily ATXN-1_C PF12547.8 BAJ50503.1 - 0.028 14.7 0.1 0.26 11.6 0.0 2.1 2 0 0 2 2 2 0 Capicua transcriptional repressor modulator DUF3237 PF11578.8 BAJ50504.1 - 3.7e-09 36.6 0.3 9.2e-05 22.3 0.0 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3237) ABC_tran PF00005.27 BAJ50506.1 - 4.5e-26 92.0 0.0 7.7e-26 91.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50506.1 - 1.4e-07 31.7 0.3 0.00071 19.5 0.0 2.5 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system OB_MalK PF17912.1 BAJ50506.1 - 5.7e-06 27.1 0.0 1.7e-05 25.5 0.0 1.9 1 0 0 1 1 1 1 MalK OB fold domain CysA_C_terminal PF17850.1 BAJ50506.1 - 0.00036 21.0 0.0 0.00083 19.9 0.0 1.7 1 0 0 1 1 1 1 CysA C-terminal regulatory domain AAA PF00004.29 BAJ50506.1 - 0.00081 19.8 0.1 0.0034 17.8 0.0 2.1 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) TOBE_2 PF08402.10 BAJ50506.1 - 0.0011 19.1 0.0 0.0024 18.0 0.0 1.6 1 0 0 1 1 1 1 TOBE domain AAA_29 PF13555.6 BAJ50506.1 - 0.002 17.8 0.0 0.0037 17.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 BAJ50506.1 - 0.0024 18.4 0.3 0.0094 16.5 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 BAJ50506.1 - 0.0046 16.7 0.0 0.0091 15.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 BAJ50506.1 - 0.0046 17.1 0.6 0.04 14.1 0.6 2.1 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 BAJ50506.1 - 0.0051 17.1 0.0 0.016 15.5 0.0 1.8 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.6 BAJ50506.1 - 0.0071 16.7 0.0 0.015 15.7 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 BAJ50506.1 - 0.025 14.5 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase ATPase_2 PF01637.18 BAJ50506.1 - 0.036 14.0 0.0 0.076 12.9 0.0 1.6 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 BAJ50506.1 - 0.036 14.1 0.0 0.085 12.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_15 PF13175.6 BAJ50506.1 - 0.039 13.7 0.0 0.2 11.3 0.0 1.8 1 1 1 2 2 2 0 AAA ATPase domain SMC_N PF02463.19 BAJ50506.1 - 0.048 13.1 0.1 6.8 6.1 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain G-alpha PF00503.20 BAJ50506.1 - 0.054 12.6 0.0 0.081 12.1 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit NACHT PF05729.12 BAJ50506.1 - 0.065 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_18 PF13238.6 BAJ50506.1 - 0.095 13.2 0.1 0.19 12.3 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 BAJ50506.1 - 0.098 12.9 0.0 0.18 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 BAJ50506.1 - 0.12 12.3 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 BAJ50506.1 - 0.13 12.7 0.0 0.29 11.5 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Zeta_toxin PF06414.12 BAJ50506.1 - 0.15 11.3 0.0 9.7 5.4 0.0 2.2 2 0 0 2 2 2 0 Zeta toxin Neurensin PF14927.6 BAJ50507.1 - 0.051 13.3 1.3 0.072 12.8 0.1 1.7 1 1 1 2 2 2 0 Neurensin CybS PF05328.12 BAJ50507.1 - 0.054 13.2 1.1 0.059 13.1 1.1 1.1 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit YrhC PF14143.6 BAJ50507.1 - 0.084 13.0 3.8 0.16 12.1 3.8 1.4 1 0 0 1 1 1 0 YrhC-like protein TMEM43 PF07787.12 BAJ50507.1 - 4.9 6.5 6.2 1.8 7.9 0.3 2.1 1 1 1 2 2 2 0 Transmembrane protein 43 ABC_tran PF00005.27 BAJ50508.1 - 2.7e-34 118.6 0.0 4.6e-34 117.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50508.1 - 6.2e-07 29.5 0.2 0.027 14.3 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 BAJ50508.1 - 4e-05 23.7 0.0 9.4e-05 22.5 0.0 1.7 1 0 0 1 1 1 1 TOBE domain AAA_23 PF13476.6 BAJ50508.1 - 0.00048 20.7 0.0 0.001 19.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 BAJ50508.1 - 0.0011 18.9 0.7 0.029 14.3 0.0 2.8 3 0 0 3 3 3 1 RsgA GTPase AAA_16 PF13191.6 BAJ50508.1 - 0.0023 18.3 0.2 0.09 13.2 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain DLIC PF05783.11 BAJ50508.1 - 0.0026 16.7 0.0 0.0042 16.0 0.0 1.2 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA_22 PF13401.6 BAJ50508.1 - 0.004 17.4 2.5 0.052 13.8 2.5 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 BAJ50508.1 - 0.0048 16.6 0.0 0.012 15.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 BAJ50508.1 - 0.0074 16.0 0.0 0.017 14.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 BAJ50508.1 - 0.009 16.0 0.1 0.02 14.9 0.1 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE TOBE PF03459.17 BAJ50508.1 - 0.018 15.3 0.8 0.094 13.0 0.1 2.5 3 0 0 3 3 3 0 TOBE domain NB-ARC PF00931.22 BAJ50508.1 - 0.027 13.7 0.0 0.055 12.6 0.0 1.5 1 1 0 1 1 1 0 NB-ARC domain Mg_chelatase PF01078.21 BAJ50508.1 - 0.034 13.5 0.0 0.089 12.2 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI SMC_N PF02463.19 BAJ50508.1 - 0.05 13.0 0.0 6.7 6.1 0.0 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain PhoH PF02562.16 BAJ50508.1 - 0.073 12.5 0.2 0.71 9.3 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein IstB_IS21 PF01695.17 BAJ50508.1 - 0.075 12.8 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA PF00004.29 BAJ50508.1 - 0.079 13.4 0.1 0.48 10.9 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 BAJ50508.1 - 0.13 12.5 0.1 0.86 9.9 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TniB PF05621.11 BAJ50508.1 - 0.14 11.6 0.6 3.8 6.9 0.2 2.5 1 1 1 2 2 2 0 Bacterial TniB protein NACHT PF05729.12 BAJ50508.1 - 0.17 11.8 0.1 0.38 10.7 0.1 1.5 1 0 0 1 1 1 0 NACHT domain BPD_transp_1 PF00528.22 BAJ50509.1 - 1.2e-20 74.0 18.9 1.2e-20 74.0 18.9 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3981 PF13139.6 BAJ50509.1 - 0.025 15.0 1.4 3.6 8.0 0.0 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3981) DUF4064 PF13273.6 BAJ50509.1 - 9.2 6.6 17.0 0.047 14.0 3.8 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF4064) BPD_transp_1 PF00528.22 BAJ50510.1 - 6e-12 45.7 20.3 6e-12 45.7 20.3 2.1 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 BAJ50511.1 - 7.1e-17 62.1 0.0 1.2e-16 61.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 BAJ50511.1 - 2.1e-14 54.2 0.9 3.9e-14 53.3 0.0 1.9 2 1 0 2 2 2 1 Bacterial extracellular solute-binding protein Aldedh PF00171.22 BAJ50512.1 - 9.4e-171 568.4 0.1 1.1e-170 568.1 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 BAJ50512.1 - 0.00094 18.3 0.0 0.0025 16.9 0.0 1.6 2 0 0 2 2 2 1 Acyl-CoA reductase (LuxC) Wtap PF17098.5 BAJ50512.1 - 0.029 14.3 0.2 0.049 13.6 0.2 1.3 1 0 0 1 1 1 0 WTAP/Mum2p family M157 PF11624.8 BAJ50512.1 - 0.088 12.1 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 MHC class I-like protein M157 SMP_LBD PF17047.5 BAJ50512.1 - 0.091 12.2 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Synaptotagmin-like mitochondrial-lipid-binding domain FAA_hydrolase PF01557.18 BAJ50513.1 - 2.2e-25 89.6 0.0 8.3e-25 87.7 0.0 1.8 1 1 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Epimerase PF01370.21 BAJ50514.1 - 2.5e-33 115.5 0.0 3.1e-33 115.2 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 BAJ50514.1 - 2.4e-31 109.4 0.0 2.8e-31 109.2 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 BAJ50514.1 - 1.5e-16 60.3 0.0 2e-16 59.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 BAJ50514.1 - 2e-12 46.8 0.0 7.7e-12 44.9 0.0 1.9 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 BAJ50514.1 - 4.5e-12 45.7 0.0 6.4e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 BAJ50514.1 - 2.4e-06 27.6 0.0 4.1e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 BAJ50514.1 - 2.9e-06 26.6 0.0 0.017 14.3 0.0 2.3 2 0 0 2 2 2 2 Male sterility protein adh_short PF00106.25 BAJ50514.1 - 0.0012 18.4 0.0 0.002 17.6 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 BAJ50514.1 - 0.0071 15.9 0.5 0.034 13.7 0.5 2.0 1 1 0 1 1 1 1 NmrA-like family KR PF08659.10 BAJ50514.1 - 0.064 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 KR domain HpcH_HpaI PF03328.14 BAJ50515.1 - 7.9e-39 133.1 0.9 9.2e-39 132.8 0.9 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PAC2 PF09754.9 BAJ50516.1 - 2.6e-27 96.2 0.1 3.1e-27 96.0 0.1 1.0 1 0 0 1 1 1 1 PAC2 family DUF350 PF03994.14 BAJ50517.1 - 3.6e-08 33.4 0.3 6e-08 32.7 0.3 1.5 1 1 0 1 1 1 1 Domain of Unknown Function (DUF350) DUF2232 PF09991.9 BAJ50517.1 - 0.0092 15.2 1.3 0.01 15.1 1.3 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2232) Brr6_like_C_C PF10104.9 BAJ50517.1 - 0.071 12.9 1.2 0.076 12.8 0.4 1.5 1 1 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain STT3 PF02516.14 BAJ50519.1 - 5.4e-46 157.5 17.8 7.9e-46 157.0 17.8 1.2 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit Dpy19 PF10034.9 BAJ50519.1 - 0.038 12.2 4.7 0.73 8.0 0.0 2.2 2 0 0 2 2 2 0 Q-cell neuroblast polarisation PMT_2 PF13231.6 BAJ50519.1 - 0.99 9.6 25.7 0.024 14.9 12.6 3.4 3 1 0 3 3 3 0 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF5122 PF17164.4 BAJ50520.1 - 0.0036 17.5 2.4 1 9.7 0.2 3.9 3 0 0 3 3 3 1 Domain of unknown function (DUF5122) beta-propeller RIFIN PF02009.16 BAJ50520.1 - 5.2 6.9 12.1 9.5 6.0 12.1 1.4 1 0 0 1 1 1 0 Rifin Ribonuc_L-PSP PF01042.21 BAJ50521.1 - 5.5e-37 126.5 0.0 6.2e-37 126.3 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF844 PF05815.11 BAJ50521.1 - 0.13 11.4 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF844) Peptidase_M24 PF00557.24 BAJ50522.1 - 1.3e-42 145.9 0.0 1.7e-42 145.5 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 BAJ50522.1 - 7.3e-17 62.3 0.0 5.7e-16 59.4 0.0 2.0 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain ABC_tran PF00005.27 BAJ50523.1 - 1.4e-30 106.6 0.0 2.1e-30 106.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 BAJ50523.1 - 7.6e-10 39.5 0.0 2.7e-09 37.7 0.0 2.0 2 0 0 2 2 1 1 MalK OB fold domain TOBE_2 PF08402.10 BAJ50523.1 - 6e-09 35.9 0.0 1.7e-08 34.5 0.0 1.8 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 BAJ50523.1 - 4.3e-05 23.5 0.0 0.16 11.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 BAJ50523.1 - 4.7e-05 23.4 0.0 6.9e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 BAJ50523.1 - 0.00012 21.6 0.0 0.0019 17.7 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 BAJ50523.1 - 0.00062 19.7 0.0 0.0014 18.6 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase TOBE PF03459.17 BAJ50523.1 - 0.0019 18.5 0.0 0.0043 17.3 0.0 1.6 1 0 0 1 1 1 1 TOBE domain AAA_29 PF13555.6 BAJ50523.1 - 0.0045 16.7 0.1 0.012 15.4 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain CysA_C_terminal PF17850.1 BAJ50523.1 - 0.0053 17.3 0.0 0.021 15.4 0.0 2.2 2 0 0 2 2 1 1 CysA C-terminal regulatory domain AAA_22 PF13401.6 BAJ50523.1 - 0.02 15.2 0.0 0.036 14.3 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 BAJ50523.1 - 0.026 15.0 0.1 0.046 14.2 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 BAJ50523.1 - 0.069 13.5 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AIG1 PF04548.16 BAJ50523.1 - 0.075 12.4 0.0 0.14 11.4 0.0 1.4 1 0 0 1 1 1 0 AIG1 family RNA_helicase PF00910.22 BAJ50523.1 - 0.097 13.1 0.0 0.64 10.4 0.0 2.3 2 0 0 2 2 2 0 RNA helicase MIT_C PF16565.5 BAJ50523.1 - 0.14 12.2 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT SbcCD_C PF13558.6 BAJ50523.1 - 0.15 12.3 0.1 1.8 8.8 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_28 PF13521.6 BAJ50523.1 - 0.17 12.1 0.2 0.44 10.8 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 BAJ50523.1 - 0.25 11.0 0.0 0.49 10.1 0.0 1.4 2 0 0 2 2 2 0 AAA ATPase domain BPD_transp_1 PF00528.22 BAJ50524.1 - 1.1e-20 74.2 17.5 1.1e-20 74.2 17.5 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component PIG-Y PF15159.6 BAJ50524.1 - 4.9 8.1 9.2 0.48 11.4 0.9 2.9 2 1 1 3 3 3 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y BPD_transp_1 PF00528.22 BAJ50525.1 - 2.6e-07 30.6 24.6 2.6e-07 30.6 24.6 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component PIP49_N PF14875.6 BAJ50525.1 - 0.24 11.3 0.1 0.52 10.2 0.1 1.6 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 SBP_bac_8 PF13416.6 BAJ50526.1 - 1.8e-17 64.1 1.9 3e-17 63.4 1.9 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 BAJ50526.1 - 4.6e-08 33.4 4.0 7.5e-08 32.7 4.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Ala_racemase_N PF01168.20 BAJ50527.1 - 3.4e-31 108.6 0.1 4.5e-31 108.2 0.1 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain D-ser_dehydrat PF14031.6 BAJ50527.1 - 2.4e-22 79.4 0.1 5.4e-22 78.3 0.1 1.6 1 0 0 1 1 1 1 Putative serine dehydratase domain DUF3834 PF12916.7 BAJ50527.1 - 0.018 14.3 0.1 0.026 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3834) Bac_luciferase PF00296.20 BAJ50528.1 - 8.1e-52 176.6 0.0 1.2e-51 176.0 0.0 1.2 1 0 0 1 1 1 1 Luciferase-like monooxygenase EamA PF00892.20 BAJ50529.1 - 3.9e-29 101.6 32.5 1.1e-15 58.0 10.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 BAJ50529.1 - 0.034 13.3 12.3 0.16 11.0 2.9 3.1 2 1 1 3 3 3 0 Magnesium transporter NIPA DUF4748 PF15932.5 BAJ50529.1 - 0.12 12.1 0.2 0.32 10.8 0.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) Bac_luciferase PF00296.20 BAJ50530.1 - 2.4e-57 194.7 0.0 2.9e-57 194.5 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Cpn60_TCP1 PF00118.24 BAJ50531.1 - 6.3e-112 374.7 0.0 7.2e-112 374.5 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Enolase_C PF00113.22 BAJ50532.1 - 1.4e-90 303.6 0.0 1.7e-90 303.2 0.0 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 BAJ50532.1 - 1.5e-47 161.0 0.0 2.5e-47 160.3 0.0 1.4 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 BAJ50532.1 - 1.1e-05 25.1 0.0 1.8e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 BAJ50532.1 - 0.0024 17.1 0.3 0.01 15.0 0.0 2.0 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus APH PF01636.23 BAJ50533.1 - 1.2e-16 61.4 0.0 2.6e-16 60.3 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 BAJ50533.1 - 8.2e-05 22.3 0.2 0.0019 17.8 0.0 2.6 1 1 1 2 2 2 1 Choline/ethanolamine kinase APH_6_hur PF04655.14 BAJ50533.1 - 0.00021 20.8 0.0 0.0012 18.3 0.0 2.3 1 1 0 1 1 1 1 Aminoglycoside/hydroxyurea antibiotic resistance kinase RIO1 PF01163.22 BAJ50533.1 - 0.052 13.1 0.1 0.1 12.2 0.1 1.4 1 0 0 1 1 1 0 RIO1 family EcKinase PF02958.20 BAJ50533.1 - 0.12 11.6 0.1 0.19 11.0 0.1 1.3 1 0 0 1 1 1 0 Ecdysteroid kinase Coatomer_b_Cpla PF14806.6 BAJ50533.1 - 0.19 11.7 3.1 0.11 12.4 1.0 1.6 2 0 0 2 2 2 0 Coatomer beta subunit appendage platform GFO_IDH_MocA PF01408.22 BAJ50534.1 - 1.2e-30 106.8 0.1 2.1e-30 106.0 0.1 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 BAJ50534.1 - 0.0082 16.1 0.0 0.015 15.3 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_10 PF13460.6 BAJ50534.1 - 0.018 14.9 0.4 0.031 14.1 0.4 1.3 1 0 0 1 1 1 0 NAD(P)H-binding IlvN PF07991.12 BAJ50534.1 - 0.022 14.3 0.0 0.044 13.4 0.0 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_3 PF03447.16 BAJ50534.1 - 0.081 13.6 0.6 0.17 12.5 0.6 1.6 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain DUF4432 PF14486.6 BAJ50535.1 - 9.5e-18 64.0 0.1 1.6e-09 37.0 0.1 2.0 2 0 0 2 2 2 2 Domain of unknown function (DUF4432) Creatininase PF02633.14 BAJ50536.1 - 3.4e-64 216.6 0.0 3.8e-64 216.4 0.0 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase Peptidase_M19 PF01244.21 BAJ50537.1 - 1.4e-84 284.0 0.0 1.7e-84 283.7 0.0 1.0 1 0 0 1 1 1 1 Membrane dipeptidase (Peptidase family M19) Amidohydro_2 PF04909.14 BAJ50537.1 - 3.5e-05 23.8 0.0 4.8e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase SBP_bac_1 PF01547.25 BAJ50538.1 - 7.9e-17 62.2 6.5 1.5e-16 61.3 6.5 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 BAJ50538.1 - 5.9e-14 52.5 1.9 1.1e-13 51.6 1.9 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein CytB6-F_Fe-S PF08802.10 BAJ50538.1 - 0.035 14.1 0.3 0.082 12.9 0.3 1.6 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit CEL_III_C PF18054.1 BAJ50538.1 - 0.064 13.3 0.0 1.1 9.3 0.0 2.2 2 0 0 2 2 2 0 CEL-III C-terminal EspB PF05802.11 BAJ50538.1 - 0.15 12.0 2.1 0.3 11.1 2.1 1.4 1 0 0 1 1 1 0 Enterobacterial EspB protein BPD_transp_1 PF00528.22 BAJ50539.1 - 1.9e-07 31.0 32.4 1.9e-07 31.0 32.4 2.2 2 1 1 3 3 3 2 Binding-protein-dependent transport system inner membrane component Arc_PepC_II PF06847.11 BAJ50539.1 - 0.39 11.2 0.1 0.39 11.2 0.1 3.2 3 0 0 3 3 3 0 Archaeal Peptidase A24 C-terminus Type II BPD_transp_1 PF00528.22 BAJ50540.1 - 6.8e-14 52.0 21.7 6.8e-14 52.0 21.7 2.6 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF5336 PF17270.2 BAJ50540.1 - 0.036 13.7 0.6 0.036 13.7 0.6 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5336) ABC_tran PF00005.27 BAJ50541.1 - 2.3e-32 112.4 0.0 3.7e-32 111.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 BAJ50541.1 - 5.6e-10 39.2 0.0 1.3e-09 38.1 0.0 1.6 1 0 0 1 1 1 1 TOBE domain OB_MalK PF17912.1 BAJ50541.1 - 9.6e-06 26.3 0.0 4.1e-05 24.3 0.0 2.2 2 0 0 2 2 1 1 MalK OB fold domain TOBE PF03459.17 BAJ50541.1 - 0.00011 22.4 0.0 0.00028 21.1 0.0 1.7 1 0 0 1 1 1 1 TOBE domain SMC_N PF02463.19 BAJ50541.1 - 0.0025 17.3 0.0 0.0051 16.3 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAJ50541.1 - 0.003 17.8 0.0 0.0056 17.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 BAJ50541.1 - 0.0042 17.5 0.0 0.0097 16.3 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 BAJ50541.1 - 0.0055 16.4 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 BAJ50541.1 - 0.012 15.2 0.0 0.026 14.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain RuvB_N PF05496.12 BAJ50541.1 - 0.013 15.2 0.1 0.14 11.9 0.1 2.2 1 1 1 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA_21 PF13304.6 BAJ50541.1 - 0.013 15.3 0.1 0.46 10.3 0.0 2.1 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 BAJ50541.1 - 0.014 15.4 0.0 0.02 14.8 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_23 PF13476.6 BAJ50541.1 - 0.021 15.4 0.0 0.036 14.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 BAJ50541.1 - 0.021 15.2 0.0 0.032 14.6 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 BAJ50541.1 - 0.022 15.3 0.0 0.041 14.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain CysA_C_terminal PF17850.1 BAJ50541.1 - 0.032 14.8 0.0 0.19 12.3 0.0 2.3 2 0 0 2 2 2 0 CysA C-terminal regulatory domain AAA_28 PF13521.6 BAJ50541.1 - 0.048 13.9 0.0 0.15 12.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 BAJ50541.1 - 0.05 13.6 0.1 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 BAJ50541.1 - 0.056 13.0 0.0 0.099 12.2 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.6 BAJ50541.1 - 0.067 13.5 0.2 0.12 12.7 0.1 1.6 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 BAJ50541.1 - 0.085 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 BAJ50541.1 - 0.088 12.6 0.0 0.21 11.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NB-ARC PF00931.22 BAJ50541.1 - 0.14 11.3 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain ABC_tran PF00005.27 BAJ50542.1 - 8.1e-29 100.9 0.0 1.3e-28 100.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 BAJ50542.1 - 4.1e-08 33.9 0.0 1.4e-07 32.2 0.0 2.0 1 0 0 1 1 1 1 MalK OB fold domain TOBE_2 PF08402.10 BAJ50542.1 - 1.9e-05 24.8 0.0 5.4e-05 23.3 0.0 1.8 2 0 0 2 2 2 1 TOBE domain TOBE PF03459.17 BAJ50542.1 - 3e-05 24.2 0.0 0.00043 20.5 0.0 2.5 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 BAJ50542.1 - 0.00028 20.8 0.1 0.6 9.9 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 BAJ50542.1 - 0.0031 17.4 0.0 0.0048 16.8 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 BAJ50542.1 - 0.012 15.9 1.4 0.098 12.9 1.4 2.2 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ50542.1 - 0.039 14.4 0.6 0.1 13.0 0.6 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAJ50542.1 - 0.043 14.2 0.1 0.11 12.9 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 BAJ50542.1 - 0.046 13.6 0.0 0.096 12.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase CysA_C_terminal PF17850.1 BAJ50542.1 - 0.075 13.6 0.0 0.42 11.2 0.0 2.4 2 1 0 2 2 2 0 CysA C-terminal regulatory domain G-alpha PF00503.20 BAJ50542.1 - 0.17 11.0 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit GFO_IDH_MocA PF01408.22 BAJ50543.1 - 5e-25 88.7 1.3 8e-25 88.0 1.3 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 BAJ50543.1 - 3.3e-07 30.9 0.6 5.5e-07 30.2 0.6 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 BAJ50543.1 - 8e-06 26.0 0.2 1.2e-05 25.3 0.2 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Semialdhyde_dh PF01118.24 BAJ50543.1 - 7.1e-05 23.2 0.1 0.00018 21.9 0.1 1.6 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA_C PF02894.17 BAJ50543.1 - 0.0002 21.3 0.0 0.00046 20.2 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain G6PD_N PF00479.22 BAJ50543.1 - 0.0081 16.8 0.1 0.017 15.7 0.1 1.5 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain F420_oxidored PF03807.17 BAJ50543.1 - 0.01 16.4 1.0 0.032 14.8 0.3 2.1 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Response_reg PF00072.24 BAJ50543.1 - 0.032 14.4 0.1 4.3 7.5 0.0 2.4 1 1 1 2 2 2 0 Response regulator receiver domain MTS PF05175.14 BAJ50543.1 - 0.04 13.5 0.1 0.071 12.7 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_25 PF13649.6 BAJ50543.1 - 0.11 13.3 0.0 0.27 12.0 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 BAJ50543.1 - 0.11 11.8 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase HMGL-like PF00682.19 BAJ50543.1 - 0.27 10.7 1.9 1.9 8.0 0.3 2.0 1 1 1 2 2 2 0 HMGL-like GFO_IDH_MocA PF01408.22 BAJ50544.1 - 1.6e-29 103.1 0.0 2.4e-29 102.6 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 BAJ50544.1 - 2.4e-11 43.7 0.0 4.2e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 BAJ50544.1 - 5.2e-08 33.5 0.0 7.4e-08 33.1 0.0 1.2 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain F420_oxidored PF03807.17 BAJ50544.1 - 0.0061 17.1 0.0 0.011 16.3 0.0 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DapB_N PF01113.20 BAJ50544.1 - 0.0075 16.4 0.0 0.012 15.7 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.24 BAJ50544.1 - 0.16 12.4 0.0 0.28 11.6 0.0 1.3 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 BAJ50545.1 - 2.7e-22 79.8 0.3 4e-22 79.3 0.3 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 BAJ50545.1 - 1.2e-06 28.5 0.1 2.3e-06 27.6 0.1 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 BAJ50545.1 - 0.00055 20.6 0.3 0.00097 19.8 0.3 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Oxidoreduct_C PF16490.5 BAJ50545.1 - 0.066 12.9 0.0 0.098 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain DapB_N PF01113.20 BAJ50545.1 - 0.12 12.5 0.1 0.24 11.5 0.1 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Elf-1_N PF12310.8 BAJ50545.1 - 0.13 12.8 0.1 6.2 7.4 0.0 2.4 2 0 0 2 2 2 0 Transcription factor protein N terminal RraA-like PF03737.15 BAJ50546.1 - 2.1e-33 115.6 0.5 2.5e-33 115.4 0.5 1.1 1 0 0 1 1 1 1 Aldolase/RraA OCD_Mu_crystall PF02423.15 BAJ50547.1 - 3.3e-86 289.1 6.1 4.1e-86 288.8 6.1 1.1 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 BAJ50547.1 - 4.7e-05 23.5 0.1 9.3e-05 22.5 0.1 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 BAJ50547.1 - 0.0031 16.8 0.6 0.0059 15.9 0.6 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain DUF2624 PF11116.8 BAJ50547.1 - 0.12 13.3 0.1 0.59 11.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2624) OST3_OST6 PF04756.13 BAJ50548.1 - 0.0016 17.9 3.5 0.0018 17.7 3.5 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family MARVEL PF01284.23 BAJ50548.1 - 2.3 8.3 11.3 11 6.0 11.3 1.9 1 1 0 1 1 1 0 Membrane-associating domain RecA PF00154.21 BAJ50549.1 - 2.9e-07 30.2 0.0 3.8e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein ATPase_2 PF01637.18 BAJ50549.1 - 0.00018 21.5 0.0 0.00029 20.8 0.0 1.4 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 BAJ50549.1 - 0.00041 20.8 0.0 0.00053 20.4 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain Rad51 PF08423.11 BAJ50549.1 - 0.00069 19.0 0.0 0.0016 17.7 0.0 1.5 1 1 0 1 1 1 1 Rad51 AAA_25 PF13481.6 BAJ50549.1 - 0.0011 18.6 0.0 0.0017 18.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 BAJ50549.1 - 0.0026 17.5 0.0 0.0086 15.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain TniB PF05621.11 BAJ50549.1 - 0.046 13.1 0.0 2.6 7.4 0.0 2.4 2 0 0 2 2 2 0 Bacterial TniB protein DAP3 PF10236.9 BAJ50549.1 - 0.065 12.4 0.0 0.092 11.9 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 CbiA PF01656.23 BAJ50549.1 - 0.12 12.4 0.0 0.15 12.2 0.0 1.3 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 BAJ50549.1 - 0.16 12.2 0.0 0.36 11.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain ASCH PF04266.14 BAJ50550.1 - 1.6e-09 38.3 0.0 1.9e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 ASCH domain LRR_11 PF18831.1 BAJ50550.1 - 0.09 12.4 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Leucine-rich repeat TusA PF01206.17 BAJ50551.1 - 1.3e-21 76.2 0.0 1.4e-21 76.0 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DrsE_2 PF13686.6 BAJ50552.1 - 1.1e-27 96.8 0.9 1.5e-14 54.2 0.1 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DrsE PF02635.15 BAJ50552.1 - 2.9e-11 43.8 0.0 4e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 DsrE/DsrF-like family BsuPI PF12690.7 BAJ50553.1 - 0.015 15.3 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Intracellular proteinase inhibitor Polyketide_cyc2 PF10604.9 BAJ50554.1 - 5.2e-08 33.3 0.0 7.7e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Peptidase_M50 PF02163.22 BAJ50554.1 - 0.00058 19.2 0.8 0.0016 17.8 0.8 1.7 1 1 0 1 1 1 1 Peptidase family M50 Polyketide_cyc PF03364.20 BAJ50554.1 - 0.002 18.3 0.0 0.0029 17.8 0.0 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Peptidase_M50B PF13398.6 BAJ50554.1 - 0.49 10.0 8.5 5.2 6.7 8.5 2.1 1 1 0 1 1 1 0 Peptidase M50B-like Cas_DxTHG PF09455.10 BAJ50555.1 - 2.2e-16 60.4 0.0 5.5e-10 39.4 0.0 2.3 1 1 1 2 2 2 2 CRISPR-associated (Cas) DxTHG family Osmo_CC PF08946.10 BAJ50555.1 - 0.35 11.1 3.9 13 6.1 0.2 3.3 3 0 0 3 3 3 0 Osmosensory transporter coiled coil DUF429 PF04250.13 BAJ50556.1 - 1.3e-12 48.0 0.9 2.1e-11 44.0 0.9 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF429) Glyoxalase PF00903.25 BAJ50557.1 - 5.9e-26 91.2 0.0 2e-14 53.9 0.0 2.1 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CarboxypepD_reg PF13620.6 BAJ50558.1 - 1e-08 35.3 2.3 1.2e-08 35.1 1.2 1.6 2 0 0 2 2 2 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 BAJ50558.1 - 0.00032 20.6 0.3 0.00066 19.6 0.1 1.6 2 0 0 2 2 2 1 CarboxypepD_reg-like domain Big_1 PF02369.16 BAJ50558.1 - 0.0018 18.3 0.2 0.011 15.7 1.1 1.8 2 0 0 2 2 2 1 Bacterial Ig-like domain (group 1) SdrD_B PF17210.3 BAJ50558.1 - 0.074 13.3 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 SdrD B-like domain UCR_Fe-S_N PF10399.9 BAJ50559.1 - 0.0054 16.0 1.5 0.0054 16.0 1.5 1.7 2 0 0 2 2 2 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DUF1218 PF06749.12 BAJ50560.1 - 0.019 15.5 1.9 0.019 15.5 1.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1218) Otopetrin PF03189.13 BAJ50560.1 - 1.9 7.2 8.4 2.7 6.7 8.4 1.2 1 0 0 1 1 1 0 Otopetrin DUF2070 PF09843.9 BAJ50560.1 - 7.1 4.8 19.5 9.8 4.3 19.5 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ThiS PF02597.20 BAJ50561.1 - 3.3e-15 56.5 0.0 6.4e-15 55.6 0.0 1.5 1 0 0 1 1 1 1 ThiS family MraZ PF02381.18 BAJ50561.1 - 1.2e-07 31.6 0.1 0.0088 16.0 0.0 3.2 2 1 1 3 3 3 2 MraZ protein, putative antitoxin-like Urm1 PF09138.11 BAJ50561.1 - 1.9e-05 24.9 0.3 4.3e-05 23.8 0.1 1.6 2 0 0 2 2 2 1 Urm1 (Ubiquitin related modifier) Transposase_mut PF00872.18 BAJ50561.1 - 0.081 11.8 0.1 4.2 6.1 0.0 2.0 2 0 0 2 2 2 0 Transposase, Mutator family Poly_export PF02563.16 BAJ50561.1 - 0.12 12.6 0.0 3.1 8.1 0.0 2.3 2 0 0 2 2 2 0 Polysaccharide biosynthesis/export protein Prok-JAB PF14464.6 BAJ50562.1 - 4e-20 71.7 0.0 4.7e-20 71.5 0.0 1.0 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.21 BAJ50562.1 - 1.4e-07 31.5 0.0 1.9e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease PALP PF00291.25 BAJ50563.1 - 2.3e-61 207.8 0.0 3e-61 207.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HTH_10 PF04967.12 BAJ50565.1 - 2.6e-18 65.6 0.0 4e-18 64.9 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.16 BAJ50565.1 - 3.6e-11 42.4 0.0 7.1e-11 41.5 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 GerE PF00196.19 BAJ50565.1 - 3.2e-07 29.8 0.0 5.3e-06 25.9 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_IclR PF09339.10 BAJ50565.1 - 4.2e-07 29.7 0.7 1.5e-06 27.9 0.2 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 BAJ50565.1 - 1.8e-06 27.7 0.1 8.5e-06 25.5 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 BAJ50565.1 - 2.8e-05 24.1 0.2 0.00012 22.0 0.2 2.1 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 BAJ50565.1 - 3.4e-05 23.3 1.0 4.7e-05 22.9 0.4 1.6 2 0 0 2 2 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 BAJ50565.1 - 4.5e-05 23.3 0.2 0.00013 21.8 0.2 1.8 1 1 0 1 1 1 1 MarR family Sigma70_r4_2 PF08281.12 BAJ50565.1 - 6e-05 22.6 2.0 0.00026 20.6 0.5 2.4 2 1 0 2 2 2 1 Sigma-70, region 4 HTH_38 PF13936.6 BAJ50565.1 - 7.9e-05 22.3 0.8 0.00019 21.1 0.8 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_ECF PF07638.11 BAJ50565.1 - 0.00081 19.3 0.0 0.0015 18.5 0.0 1.4 1 0 0 1 1 1 1 ECF sigma factor MarR PF01047.22 BAJ50565.1 - 0.0018 18.1 0.1 0.0061 16.5 0.1 1.9 2 0 0 2 2 2 1 MarR family HTH_36 PF13730.6 BAJ50565.1 - 0.0024 17.8 0.0 0.0042 17.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 BAJ50565.1 - 0.0025 17.6 0.1 0.007 16.1 0.1 1.7 1 0 0 1 1 1 1 Homeodomain-like domain LacI PF00356.21 BAJ50565.1 - 0.0047 16.7 0.2 0.011 15.5 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_40 PF14493.6 BAJ50565.1 - 0.0071 16.8 0.0 0.02 15.4 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 BAJ50565.1 - 0.0092 15.9 0.1 0.023 14.6 0.1 1.6 1 0 0 1 1 1 1 HTH domain TetR_N PF00440.23 BAJ50565.1 - 0.012 15.4 0.0 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_AsnC-type PF13404.6 BAJ50565.1 - 0.018 14.9 1.0 0.026 14.3 0.2 1.7 2 0 0 2 2 1 0 AsnC-type helix-turn-helix domain Homeodomain PF00046.29 BAJ50565.1 - 0.022 14.6 0.0 0.055 13.3 0.0 1.7 1 0 0 1 1 1 0 Homeodomain HTH_1 PF00126.27 BAJ50565.1 - 0.029 14.3 1.4 0.056 13.4 0.3 2.0 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Tnp_ISL3 PF13542.6 BAJ50565.1 - 0.047 13.1 0.2 0.098 12.1 0.2 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_22 PF13309.6 BAJ50565.1 - 0.056 13.5 0.1 0.7 10.0 0.0 2.5 3 0 0 3 3 2 0 HTH domain HTH_29 PF13551.6 BAJ50565.1 - 0.063 13.3 0.1 0.24 11.5 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn helix PuR_N PF09182.10 BAJ50565.1 - 0.085 12.8 0.0 0.17 11.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal HTH_28 PF13518.6 BAJ50565.1 - 0.085 13.0 0.1 0.2 11.8 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_17 PF12728.7 BAJ50565.1 - 0.089 13.0 0.1 0.32 11.2 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Sigma54_DBD PF04552.13 BAJ50565.1 - 0.093 12.4 0.1 0.19 11.4 0.1 1.6 1 0 0 1 1 1 0 Sigma-54, DNA binding domain HTH_35 PF13693.6 BAJ50565.1 - 0.099 12.7 0.3 0.18 11.8 0.3 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding UPF0122 PF04297.14 BAJ50565.1 - 0.1 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_3 PF01381.22 BAJ50565.1 - 0.11 12.6 0.1 0.23 11.6 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix LexA_DNA_bind PF01726.16 BAJ50565.1 - 0.11 12.2 1.0 0.56 10.0 1.0 2.1 1 1 0 1 1 1 0 LexA DNA binding domain HTH_Tnp_4 PF13613.6 BAJ50565.1 - 0.12 12.2 0.1 0.37 10.6 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease HTH_Crp_2 PF13545.6 BAJ50565.1 - 0.13 12.3 4.0 0.14 12.2 0.2 2.7 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain HTH_Tnp_Tc3_1 PF11427.8 BAJ50565.1 - 0.15 11.9 0.7 1.5 8.8 0.1 2.2 2 0 0 2 2 2 0 Tc3 transposase SoPB_HTH PF18090.1 BAJ50565.1 - 0.16 12.1 0.2 0.64 10.2 0.1 2.0 3 0 0 3 3 1 0 Centromere-binding protein HTH domain Cu-oxidase_3 PF07732.15 BAJ50566.1 - 1.3e-11 44.6 0.2 6.1e-10 39.1 0.0 2.6 2 0 0 2 2 2 1 Multicopper oxidase Cupredoxin_1 PF13473.6 BAJ50566.1 - 4.6e-11 42.8 0.0 2e-05 24.6 0.0 2.7 2 1 0 2 2 2 2 Cupredoxin-like domain Cu-oxidase_2 PF07731.14 BAJ50566.1 - 5.1e-11 42.5 0.1 1.1e-06 28.4 0.1 3.5 2 1 0 2 2 2 2 Multicopper oxidase Copper-bind PF00127.20 BAJ50566.1 - 4.4e-07 30.3 0.2 0.0011 19.4 0.0 2.8 2 0 0 2 2 2 2 Copper binding proteins, plastocyanin/azurin family SCO1-SenC PF02630.14 BAJ50567.1 - 2.1e-31 108.6 0.0 2.9e-31 108.1 0.0 1.1 1 0 0 1 1 1 1 SCO1/SenC AhpC-TSA PF00578.21 BAJ50567.1 - 7.9e-07 29.0 0.0 1e-06 28.7 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 BAJ50567.1 - 1.5e-06 28.0 0.0 1.7e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 BAJ50567.1 - 0.0067 16.7 0.0 0.0099 16.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like NACHT PF05729.12 BAJ50567.1 - 0.018 14.9 0.0 0.033 14.1 0.0 1.4 1 1 0 1 1 1 0 NACHT domain GSHPx PF00255.19 BAJ50567.1 - 0.086 12.4 0.0 0.32 10.6 0.0 1.8 2 0 0 2 2 2 0 Glutathione peroxidase ABC2_membrane PF01061.24 BAJ50570.1 - 1.5e-10 40.9 17.4 1.5e-10 40.9 17.4 1.5 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 BAJ50570.1 - 0.00067 18.9 18.3 0.00067 18.9 18.3 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 BAJ50571.1 - 1.4e-24 87.1 0.0 3e-24 86.1 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50571.1 - 1.2e-13 51.6 0.5 1.3e-07 31.8 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 BAJ50571.1 - 9.2e-06 26.3 0.2 2.1e-05 25.1 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) Rad17 PF03215.15 BAJ50571.1 - 1e-05 25.5 0.0 2.1e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 BAJ50571.1 - 0.00041 20.0 0.1 0.00085 19.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 BAJ50571.1 - 0.0011 18.8 0.0 0.3 10.8 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 BAJ50571.1 - 0.0021 18.6 0.0 0.0039 17.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain MukB PF04310.12 BAJ50571.1 - 0.0031 17.4 0.0 0.0053 16.6 0.0 1.3 1 0 0 1 1 1 1 MukB N-terminal AAA_30 PF13604.6 BAJ50571.1 - 0.014 15.1 0.1 0.028 14.2 0.1 1.6 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.22 BAJ50571.1 - 0.025 14.2 0.1 0.04 13.5 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_22 PF13401.6 BAJ50571.1 - 0.033 14.5 0.1 0.34 11.2 0.0 2.3 2 1 0 2 2 2 0 AAA domain AAA_24 PF13479.6 BAJ50571.1 - 0.053 13.2 0.1 0.43 10.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 BAJ50571.1 - 0.062 13.2 0.3 7.5 6.5 0.1 2.8 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 BAJ50571.1 - 0.062 13.8 0.0 0.25 11.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 BAJ50571.1 - 0.11 12.9 0.2 0.68 10.4 0.0 2.3 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 BAJ50571.1 - 0.16 12.2 0.0 0.38 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain HTH_10 PF04967.12 BAJ50572.1 - 9.1e-17 60.6 0.0 1.4e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain GHMP_kinases_C PF08544.13 BAJ50572.1 - 0.019 15.3 0.0 0.34 11.3 0.0 2.5 3 0 0 3 3 3 0 GHMP kinases C terminal Lig_C PF18330.1 BAJ50572.1 - 0.081 12.9 0.1 0.17 11.9 0.1 1.7 1 1 0 1 1 1 0 Ligase Pab1020 C-terminal region Cu-oxidase_3 PF07732.15 BAJ50573.1 - 4.2e-22 78.4 0.6 2.6e-16 59.7 0.2 2.3 2 0 0 2 2 2 2 Multicopper oxidase Cu-oxidase_2 PF07731.14 BAJ50573.1 - 4.8e-18 65.2 4.8 3.4e-10 39.8 0.6 3.2 2 2 0 2 2 2 2 Multicopper oxidase Cupredoxin_1 PF13473.6 BAJ50574.1 - 5.7e-10 39.2 0.0 7.4e-10 38.9 0.0 1.3 1 1 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 BAJ50574.1 - 6.8e-10 39.3 0.1 1.1e-07 32.1 0.1 2.2 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family DUF948 PF06103.11 BAJ50574.1 - 0.25 11.6 1.7 0.54 10.6 0.9 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) NosL PF05573.12 BAJ50575.1 - 1.6e-11 44.6 0.0 3.8e-11 43.4 0.0 1.5 1 0 0 1 1 1 1 NosL AhpC-TSA PF00578.21 BAJ50575.1 - 1.4e-10 41.1 0.0 3.3e-10 39.9 0.0 1.6 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 BAJ50575.1 - 1.7e-09 37.6 0.1 3.4e-09 36.6 0.1 1.5 1 1 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 BAJ50575.1 - 3.4e-05 24.1 0.0 6.1e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_7 PF13899.6 BAJ50575.1 - 0.00012 22.2 0.0 0.00026 21.1 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 BAJ50575.1 - 0.00039 20.4 0.0 0.0007 19.6 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin SCO1-SenC PF02630.14 BAJ50575.1 - 0.00076 19.4 0.0 0.0012 18.7 0.0 1.3 1 0 0 1 1 1 1 SCO1/SenC Thioredoxin_2 PF13098.6 BAJ50575.1 - 0.0029 18.0 0.0 0.005 17.3 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like domain IBP39 PF11422.8 BAJ50575.1 - 0.087 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Initiator binding protein 39 kDa MarR_2 PF12802.7 BAJ50576.1 - 2.5e-05 24.1 1.7 4e-05 23.4 1.7 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 BAJ50576.1 - 5.1e-05 23.1 0.3 8e-05 22.4 0.3 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 BAJ50576.1 - 0.00039 19.9 0.5 0.00056 19.4 0.5 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 BAJ50576.1 - 0.00051 19.8 0.1 0.00087 19.1 0.1 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 BAJ50576.1 - 0.00052 19.9 0.3 0.00084 19.3 0.3 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_27 PF13463.6 BAJ50576.1 - 0.0046 17.4 1.0 0.0071 16.8 1.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain AA_permease PF00324.21 BAJ50576.1 - 0.014 14.0 2.8 0.018 13.7 2.8 1.0 1 0 0 1 1 1 0 Amino acid permease Rrf2 PF02082.20 BAJ50576.1 - 0.028 14.7 0.2 0.053 13.9 0.2 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_micro PF17007.5 BAJ50576.1 - 0.07 11.9 0.0 0.092 11.6 0.0 1.1 1 0 0 1 1 1 0 HTH-like PepSY PF03413.19 BAJ50577.1 - 0.024 15.2 0.0 12 6.5 0.1 2.6 2 1 0 2 2 2 0 Peptidase propeptide and YPEB domain DUF4064 PF13273.6 BAJ50578.1 - 0.00017 21.8 21.6 0.00018 21.7 12.2 3.0 2 1 0 2 2 2 2 Protein of unknown function (DUF4064) DUF411 PF04214.13 BAJ50579.1 - 2.9e-26 91.2 0.2 4.3e-26 90.6 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF Glutaredoxin PF00462.24 BAJ50579.1 - 0.00032 20.8 0.1 0.00061 19.9 0.1 1.5 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 BAJ50579.1 - 0.11 12.9 0.1 0.18 12.3 0.1 1.4 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Redoxin PF08534.10 BAJ50579.1 - 0.19 11.5 0.3 0.31 10.8 0.3 1.3 1 0 0 1 1 1 0 Redoxin HTH_20 PF12840.7 BAJ50580.1 - 0.088 12.9 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain CRISPR_Cas9_WED PF18061.1 BAJ50582.1 - 0.01 15.9 0.7 0.029 14.4 0.7 1.9 1 0 0 1 1 1 0 CRISPR-Cas9 WED domain PrmC_N PF17827.1 BAJ50582.1 - 0.023 15.3 2.1 0.17 12.5 0.1 2.8 2 1 1 3 3 3 0 PrmC N-terminal domain LAGLIDADG_3 PF14528.6 BAJ50585.1 - 1.1e-17 64.1 0.1 1e-14 54.6 0.1 2.5 2 0 0 2 2 2 2 LAGLIDADG-like domain Hom_end PF05204.14 BAJ50585.1 - 0.019 15.1 0.0 0.064 13.4 0.0 1.8 3 0 0 3 3 3 0 Homing endonuclease LAGLIDADG_1 PF00961.19 BAJ50585.1 - 0.024 15.6 0.5 0.25 12.3 0.1 2.2 2 0 0 2 2 2 0 LAGLIDADG endonuclease Imm43 PF15570.6 BAJ50585.1 - 0.14 12.2 0.7 0.27 11.3 0.7 1.4 1 0 0 1 1 1 0 Immunity protein 43 Auto_anti-p27 PF06677.12 BAJ50586.1 - 7.2e-12 45.3 0.9 1.3e-11 44.4 0.9 1.5 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.7 BAJ50586.1 - 0.078 13.0 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-FPG_IleRS PF06827.14 BAJ50586.1 - 0.13 12.1 3.1 6.6 6.7 0.8 2.3 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS DNA_ligase_ZBD PF03119.16 BAJ50586.1 - 0.15 12.1 6.7 0.87 9.7 3.0 2.4 1 1 1 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Cdc6_C PF09079.11 BAJ50587.1 - 6e-19 67.8 0.3 3.2e-18 65.5 0.1 2.3 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 BAJ50587.1 - 1.3e-11 45.0 0.0 2.9e-11 43.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ50587.1 - 1.3e-08 35.4 1.8 2.8e-07 31.1 0.1 3.0 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 BAJ50587.1 - 2e-08 34.7 0.0 4.1e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 BAJ50587.1 - 6.6e-05 22.7 0.0 0.00011 21.9 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain TniB PF05621.11 BAJ50587.1 - 0.0039 16.6 0.0 0.0069 15.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial TniB protein ATPase_2 PF01637.18 BAJ50587.1 - 0.0065 16.4 0.0 0.017 15.0 0.0 1.8 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea TIP49_C PF17856.1 BAJ50587.1 - 0.0068 16.5 0.1 0.018 15.2 0.1 1.7 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA_assoc_2 PF16193.5 BAJ50587.1 - 0.015 15.7 0.4 0.031 14.6 0.4 1.5 1 0 0 1 1 1 0 AAA C-terminal domain AAA_5 PF07728.14 BAJ50587.1 - 0.022 14.7 0.0 0.12 12.3 0.0 2.2 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_32 PF13654.6 BAJ50587.1 - 0.04 12.7 1.3 4.1 6.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain ORC5_C PF14630.6 BAJ50587.1 - 0.04 13.4 0.1 0.23 10.9 0.1 1.8 1 1 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus AAA_18 PF13238.6 BAJ50587.1 - 0.045 14.3 0.0 0.16 12.5 0.0 1.9 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 BAJ50587.1 - 0.056 12.6 0.0 0.08 12.1 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase TsaE PF02367.17 BAJ50587.1 - 0.059 13.4 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NB-ARC PF00931.22 BAJ50587.1 - 0.07 12.3 0.0 0.1 11.7 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain RNA_helicase PF00910.22 BAJ50587.1 - 0.11 12.9 0.0 0.2 12.0 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 BAJ50587.1 - 0.14 11.6 0.0 0.27 10.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF2075 PF09848.9 BAJ50587.1 - 0.15 11.3 0.0 0.19 10.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Pox_D5 PF03288.16 BAJ50587.1 - 0.18 12.4 0.0 0.44 11.1 0.0 1.6 1 0 0 1 1 1 0 Poxvirus D5 protein-like AAA_13 PF13166.6 BAJ50587.1 - 0.29 9.7 0.0 0.42 9.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain Endonuclease_5 PF04493.14 BAJ50588.1 - 2.2e-36 125.4 0.1 2.8e-36 125.1 0.1 1.1 1 0 0 1 1 1 1 Endonuclease V DUF99 PF01949.16 BAJ50588.1 - 0.003 17.0 0.3 0.012 15.0 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function DUF99 Methyltransf_25 PF13649.6 BAJ50589.1 - 1.8e-13 51.0 0.1 2.5e-13 50.5 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 BAJ50589.1 - 4.1e-13 49.8 0.1 6.2e-13 49.2 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAJ50589.1 - 1.5e-08 34.5 0.0 2.1e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAJ50589.1 - 3e-07 31.1 0.0 5.2e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAJ50589.1 - 5.5e-06 26.3 0.0 6.6e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 BAJ50589.1 - 0.0032 17.1 0.0 0.0039 16.8 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.6 BAJ50589.1 - 0.086 12.8 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain NTP_transf_2 PF01909.23 BAJ50590.1 - 3.9e-06 27.1 0.0 7.7e-06 26.1 0.0 1.5 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ50590.1 - 0.0013 18.7 0.0 0.0026 17.8 0.0 1.4 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF294 PF03445.13 BAJ50590.1 - 0.0092 15.8 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 Putative nucleotidyltransferase DUF294 IMPDH PF00478.25 BAJ50591.1 - 6.2e-149 495.7 6.0 7.1e-149 495.5 6.0 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 BAJ50591.1 - 1.4e-23 83.1 0.1 4.2e-11 43.1 0.0 2.9 2 0 0 2 2 2 2 CBS domain NMO PF03060.15 BAJ50591.1 - 2.5e-11 43.5 13.9 1.9e-07 30.8 0.7 3.3 3 1 0 3 3 3 2 Nitronate monooxygenase FMN_dh PF01070.18 BAJ50591.1 - 3.4e-09 36.2 12.5 2e-08 33.6 9.4 2.9 3 1 0 3 3 3 1 FMN-dependent dehydrogenase DHO_dh PF01180.21 BAJ50591.1 - 5e-05 22.7 4.4 0.00073 18.8 1.1 2.3 1 1 1 2 2 2 1 Dihydroorotate dehydrogenase His_biosynth PF00977.21 BAJ50591.1 - 8.4e-05 22.1 6.9 0.0003 20.3 0.1 2.7 2 1 0 3 3 3 2 Histidine biosynthesis protein PEP_mutase PF13714.6 BAJ50591.1 - 9e-05 22.0 2.9 0.0001 21.9 0.8 2.2 1 1 0 2 2 2 1 Phosphoenolpyruvate phosphomutase Glu_synthase PF01645.17 BAJ50591.1 - 0.0012 18.0 6.4 0.0022 17.2 5.9 1.7 1 1 0 1 1 1 1 Conserved region in glutamate synthase Dus PF01207.17 BAJ50591.1 - 0.0035 16.5 1.0 0.0082 15.3 0.0 2.0 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.12 BAJ50591.1 - 0.018 14.5 2.5 0.16 11.4 0.1 2.9 3 0 0 3 3 3 0 Glycerol-3-phosphate responsive antiterminator ThiG PF05690.14 BAJ50591.1 - 0.043 13.1 7.1 0.031 13.6 2.4 2.5 2 1 1 3 3 3 0 Thiazole biosynthesis protein ThiG Aldolase PF01081.19 BAJ50591.1 - 0.82 9.1 7.8 0.079 12.4 1.8 2.2 2 1 0 2 2 2 0 KDPG and KHG aldolase Adenylsucc_synt PF00709.21 BAJ50592.1 - 1.9e-139 465.2 0.0 2.2e-139 465.0 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Lyase_1 PF00206.20 BAJ50593.1 - 6.2e-35 121.1 0.0 9.2e-35 120.5 0.0 1.2 1 0 0 1 1 1 1 Lyase ASL_C PF08328.11 BAJ50593.1 - 1.1e-15 57.8 0.0 3.3e-15 56.2 0.0 1.8 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal PmbA_TldD PF01523.16 BAJ50594.1 - 3.7e-45 154.9 0.2 4.6e-45 154.6 0.2 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase HtaA PF04213.13 BAJ50594.1 - 0.09 13.3 0.1 0.21 12.1 0.1 1.5 1 0 0 1 1 1 0 Htaa APH PF01636.23 BAJ50595.1 - 4.6e-06 26.7 0.0 1.3e-05 25.2 0.0 1.8 1 1 0 1 1 1 1 Phosphotransferase enzyme family Gemini_C4 PF01492.17 BAJ50595.1 - 0.18 11.7 0.0 0.36 10.8 0.0 1.4 1 0 0 1 1 1 0 Geminivirus C4 protein NeuB PF03102.14 BAJ50596.1 - 0.01 15.3 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 NeuB family NTP_transf_2 PF01909.23 BAJ50596.1 - 0.05 13.9 0.0 0.11 12.8 0.0 1.6 1 0 0 1 1 1 0 Nucleotidyltransferase domain NTP_transf_2 PF01909.23 BAJ50597.1 - 1.4e-05 25.3 0.0 2.7e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain MdcG PF10620.9 BAJ50597.1 - 0.0088 15.8 0.0 0.014 15.2 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl-dephospho-CoA transferase MdcG Polbeta PF18765.1 BAJ50597.1 - 0.016 15.3 0.0 0.028 14.5 0.0 1.4 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase POR PF01558.18 BAJ50598.1 - 4.5e-31 108.3 0.0 5.9e-31 107.9 0.0 1.1 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Fer4 PF00037.27 BAJ50599.1 - 1.3e-10 40.7 20.9 2.3e-05 24.0 8.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 BAJ50599.1 - 2e-07 30.7 11.9 0.0005 20.0 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 BAJ50599.1 - 2.1e-07 31.0 13.3 2.8e-07 30.5 13.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ50599.1 - 2.2e-06 27.7 10.5 3.6e-06 27.0 10.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ50599.1 - 3.1e-06 27.2 13.5 4.4e-06 26.8 13.5 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 BAJ50599.1 - 7.2e-06 26.5 38.3 0.00033 21.2 14.9 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 BAJ50599.1 - 3.5e-05 24.6 11.4 0.064 14.2 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 BAJ50599.1 - 0.00018 21.5 17.7 0.015 15.4 3.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 BAJ50599.1 - 0.0092 16.7 11.1 0.15 12.8 4.9 2.5 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_8 PF13183.6 BAJ50599.1 - 0.02 15.3 10.5 1.1 9.7 0.2 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 BAJ50599.1 - 0.078 13.5 14.4 1.4 9.5 1.6 2.2 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 BAJ50599.1 - 0.18 12.4 14.5 0.44 11.1 2.8 2.4 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I REC104 PF17378.2 BAJ50599.1 - 0.23 11.3 0.0 0.29 10.9 0.0 1.1 1 0 0 1 1 1 0 Meiotic recombination protein REC104 Fer4_4 PF12800.7 BAJ50599.1 - 0.46 11.1 14.7 1.7 9.4 1.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain POR_N PF01855.19 BAJ50600.1 - 3.9e-70 236.2 1.3 5.2e-70 235.8 1.3 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 BAJ50600.1 - 1.4e-13 51.0 0.0 3.3e-13 49.8 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 BAJ50600.1 - 0.014 15.0 0.8 0.022 14.4 0.8 1.4 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Reprolysin_3 PF13582.6 BAJ50600.1 - 0.084 13.4 0.0 0.68 10.5 0.0 2.3 3 0 0 3 3 3 0 Metallo-peptidase family M12B Reprolysin-like TPP_enzyme_C PF02775.21 BAJ50601.1 - 2e-27 95.8 0.0 2.7e-27 95.4 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Cupin_2 PF07883.11 BAJ50602.1 - 1.3e-21 76.0 0.4 1.7e-21 75.7 0.4 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 BAJ50602.1 - 2.1e-09 37.1 0.0 2.9e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.19 BAJ50602.1 - 1.1e-08 35.1 0.1 1.3e-08 34.8 0.1 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 BAJ50602.1 - 1.3e-06 28.4 0.0 1.5e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_3 PF05899.12 BAJ50602.1 - 3.3e-05 23.5 0.1 4.9e-05 22.9 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) EutQ PF06249.12 BAJ50602.1 - 0.00025 20.8 0.0 0.0004 20.2 0.0 1.3 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ PCO_ADO PF07847.12 BAJ50602.1 - 0.0014 18.1 0.0 0.012 15.1 0.0 1.9 1 1 1 2 2 2 1 PCO_ADO Pirin PF02678.16 BAJ50602.1 - 0.0021 18.0 0.0 0.0025 17.8 0.0 1.2 1 0 0 1 1 1 1 Pirin Auxin_BP PF02041.16 BAJ50602.1 - 0.004 16.8 0.0 0.026 14.2 0.0 1.9 1 1 0 1 1 1 1 Auxin binding protein CENP-C_C PF11699.8 BAJ50602.1 - 0.0064 16.7 0.0 0.011 15.9 0.0 1.4 1 1 0 1 1 1 1 Mif2/CENP-C like Cupin_7 PF12973.7 BAJ50602.1 - 0.012 15.5 0.1 0.018 14.9 0.1 1.4 1 1 0 1 1 1 0 ChrR Cupin-like domain Ectoine_synth PF06339.12 BAJ50602.1 - 0.086 13.0 0.0 0.094 12.9 0.0 1.1 1 0 0 1 1 1 0 Ectoine synthase JmjC PF02373.22 BAJ50602.1 - 0.13 12.7 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 JmjC domain, hydroxylase Cupin_6 PF12852.7 BAJ50602.1 - 0.14 11.8 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 Cupin HTH_27 PF13463.6 BAJ50604.1 - 3.5e-09 37.0 0.1 5.5e-09 36.4 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 BAJ50604.1 - 6.7e-06 25.9 0.1 1.1e-05 25.2 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 BAJ50604.1 - 8.3e-06 25.5 0.3 1.6e-05 24.6 0.3 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 BAJ50604.1 - 1.6e-05 24.7 0.0 2.5e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.6 BAJ50604.1 - 4.1e-05 23.5 0.0 6.2e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.7 BAJ50604.1 - 0.00029 20.7 0.1 0.00072 19.4 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 BAJ50604.1 - 0.0008 19.3 0.1 0.0016 18.4 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 BAJ50604.1 - 0.00095 19.5 0.0 0.0017 18.6 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 BAJ50604.1 - 0.0076 16.4 0.0 0.016 15.4 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 BAJ50604.1 - 0.009 15.6 0.0 0.015 14.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_12 PF08461.10 BAJ50604.1 - 0.015 15.2 0.3 0.036 14.0 0.3 1.7 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain S10_plectin PF03501.15 BAJ50604.1 - 0.02 15.0 0.0 0.035 14.2 0.0 1.4 1 0 0 1 1 1 0 Plectin/S10 domain ANT PF03374.14 BAJ50604.1 - 0.11 12.9 0.3 0.21 11.9 0.0 1.6 2 0 0 2 2 2 0 Phage antirepressor protein KilAC domain TFIIE_alpha PF02002.17 BAJ50604.1 - 0.12 12.3 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit Transp_cyt_pur PF02133.15 BAJ50605.1 - 1.8e-27 96.2 37.4 2.2e-27 95.9 37.4 1.0 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin DNA_primase_lrg PF04104.14 BAJ50606.1 - 4.9e-24 85.1 0.2 1.1e-23 84.1 0.2 1.5 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Phage_integr_3 PF16795.5 BAJ50606.1 - 0.089 12.7 0.1 0.8 9.6 0.0 2.1 2 0 0 2 2 2 0 Archaeal phage integrase Eco57I PF07669.11 BAJ50607.1 - 1.1e-07 32.3 0.0 3.5e-07 30.7 0.0 1.8 1 0 0 1 1 1 1 Eco57I restriction-modification methylase N6_Mtase PF02384.16 BAJ50607.1 - 4.2e-07 29.5 0.0 0.061 12.6 0.0 3.2 3 0 0 3 3 3 2 N-6 DNA Methylase TMEM239 PF15841.5 BAJ50607.1 - 0.027 14.4 0.5 0.062 13.2 0.5 1.5 1 0 0 1 1 1 0 Transmembrane protein 239 family DUF5343 PF17278.2 BAJ50607.1 - 0.13 12.4 0.0 0.39 10.8 0.0 1.9 1 0 0 1 1 1 0 Family of unknown function (DUF5343) Helicase_C PF00271.31 BAJ50608.1 - 7.4e-17 61.7 0.0 2.9e-16 59.8 0.0 2.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PLDc_2 PF13091.6 BAJ50608.1 - 5.1e-13 49.1 0.2 3.7e-11 43.0 0.0 3.0 3 0 0 3 3 3 1 PLD-like domain SNF2_N PF00176.23 BAJ50608.1 - 6.8e-13 48.1 5.9 2.5e-08 33.0 0.3 2.7 2 1 1 3 3 3 2 SNF2 family N-terminal domain ResIII PF04851.15 BAJ50608.1 - 1.2e-12 48.2 2.2 6.4e-06 26.3 0.1 3.3 2 1 1 3 3 3 2 Type III restriction enzyme, res subunit AAA_22 PF13401.6 BAJ50608.1 - 1.1e-06 29.0 0.7 4.9e-06 26.9 0.0 2.5 3 0 0 3 3 2 1 AAA domain DEAD PF00270.29 BAJ50608.1 - 4.1e-05 23.4 0.4 0.0061 16.4 0.4 2.7 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_30 PF13604.6 BAJ50608.1 - 0.0016 18.2 0.0 0.004 16.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain Flavi_DEAD PF07652.14 BAJ50608.1 - 0.0018 18.3 0.1 0.0063 16.5 0.1 1.9 1 1 0 1 1 1 1 Flavivirus DEAD domain RE_NgoFVII PF09565.10 BAJ50608.1 - 0.012 14.9 0.2 0.07 12.4 0.0 2.2 2 0 0 2 2 2 0 NgoFVII restriction endonuclease DUF2075 PF09848.9 BAJ50608.1 - 0.014 14.7 0.0 0.073 12.3 0.0 2.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 BAJ50608.1 - 0.018 15.5 0.6 0.21 12.0 0.0 3.1 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) CbiA PF01656.23 BAJ50608.1 - 0.023 14.7 0.6 0.15 12.1 0.6 2.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain IstB_IS21 PF01695.17 BAJ50608.1 - 0.024 14.4 0.2 1.6 8.4 0.2 2.9 1 1 0 1 1 1 0 IstB-like ATP binding protein AAA_26 PF13500.6 BAJ50608.1 - 0.033 14.0 0.5 0.77 9.5 0.5 2.7 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.22 BAJ50608.1 - 0.11 12.1 0.5 0.36 10.4 0.1 2.1 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Tae4 PF14113.6 BAJ50608.1 - 0.13 12.4 0.5 2.7 8.2 0.1 3.1 2 1 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 HU-CCDC81_bac_2 PF18175.1 BAJ50608.1 - 1.3 8.9 5.9 13 5.8 0.2 4.3 5 0 0 5 5 4 0 CCDC81-like prokaryotic HU domain 2 DUF2096 PF09869.9 BAJ50609.1 - 0.0067 16.5 0.0 0.008 16.3 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2096) Cas_APE2256 PF09651.10 BAJ50610.1 - 5e-30 104.2 0.2 9.8e-30 103.2 0.1 1.5 2 0 0 2 2 2 1 CRISPR-associated protein (Cas_APE2256) DUF3734 PF12536.8 BAJ50610.1 - 0.003 17.9 0.7 0.034 14.5 0.1 2.3 1 1 1 2 2 2 1 Patatin phospholipase Cas_Cas02710 PF09670.10 BAJ50610.1 - 0.0071 15.2 0.0 0.018 13.8 0.0 1.5 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) DUF5630 PF18632.1 BAJ50610.1 - 0.041 13.2 0.2 0.21 10.9 0.0 2.0 1 1 0 2 2 2 0 Family of unknown function (DUF5630) DUF3486 PF11985.8 BAJ50610.1 - 0.066 13.6 0.3 0.14 12.6 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3486) CompInhib_SCIN PF11546.8 BAJ50610.1 - 0.069 13.2 0.6 0.15 12.1 0.2 1.9 2 0 0 2 2 2 0 Staphylococcal complement inhibitor SCIN Band_7_1 PF13421.6 BAJ50610.1 - 0.11 12.2 0.1 0.19 11.4 0.1 1.4 1 0 0 1 1 1 0 SPFH domain-Band 7 family Mesd PF10185.9 BAJ50611.1 - 0.11 12.4 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Chaperone for wingless signalling and trafficking of LDL receptor Condensin2nSMC PF12422.8 BAJ50612.1 - 0.027 14.7 0.2 0.043 14.0 0.2 1.2 1 0 0 1 1 1 0 Condensin II non structural maintenance of chromosomes subunit DuoxA PF10204.9 BAJ50612.1 - 0.2 10.6 0.1 0.27 10.2 0.1 1.1 1 0 0 1 1 1 0 Dual oxidase maturation factor Cellulase PF00150.18 BAJ50613.1 - 3e-10 40.0 0.0 1.9e-09 37.4 0.0 2.0 1 1 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) HMMR_C PF15908.5 BAJ50613.1 - 4.6e-05 23.7 0.8 7.5e-05 23.0 0.8 1.2 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor C-terminal Syntaxin-6_N PF09177.11 BAJ50613.1 - 0.094 13.3 2.4 0.18 12.4 0.2 2.5 2 1 0 2 2 2 0 Syntaxin 6, N-terminal GAS PF13851.6 BAJ50613.1 - 0.094 12.1 7.8 0.17 11.2 7.8 1.4 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding DHR10 PF18595.1 BAJ50613.1 - 1 9.4 11.6 1.9 8.6 2.1 2.6 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Spc24 PF08286.11 BAJ50613.1 - 2.3 8.5 7.4 12 6.2 0.2 2.7 3 0 0 3 3 3 0 Spc24 subunit of Ndc80 Med4 PF10018.9 BAJ50613.1 - 9.5 5.8 9.5 0.78 9.4 0.2 2.5 3 0 0 3 3 3 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF559 PF04480.12 BAJ50614.1 - 1.5e-12 47.3 0.3 2.9e-12 46.4 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF559) MTES_1575 PF18741.1 BAJ50614.1 - 1.7e-09 37.7 0.6 9.5e-09 35.3 0.2 2.0 2 0 0 2 2 2 1 REase_MTES_1575 DUF2726 PF10881.8 BAJ50614.1 - 0.00085 19.2 0.5 0.0017 18.2 0.5 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2726) RAP PF08373.10 BAJ50614.1 - 0.016 15.3 0.0 0.061 13.4 0.0 1.9 2 0 0 2 2 2 0 RAP domain NLBH PF05211.12 BAJ50614.1 - 0.051 13.1 0.1 0.078 12.5 0.1 1.2 1 0 0 1 1 1 0 Neuraminyllactose-binding hemagglutinin precursor (NLBH) DUF1627 PF07789.12 BAJ50616.1 - 0.0013 18.4 0.0 0.0022 17.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1627) HTH_33 PF13592.6 BAJ50616.1 - 0.018 14.7 0.9 0.19 11.4 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn helix DUF406 PF04175.12 BAJ50616.1 - 0.11 12.9 0.2 0.17 12.4 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF406) UbiA PF01040.18 BAJ50617.1 - 1e-41 142.9 24.7 1.3e-41 142.6 24.7 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Amidohydro_1 PF01979.20 BAJ50618.1 - 7.3e-27 94.6 0.0 8.6e-27 94.3 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 BAJ50618.1 - 1.7e-18 67.4 0.1 2.1e-08 34.1 0.0 2.3 2 1 0 2 2 2 2 Amidohydrolase family Urease_alpha PF00449.20 BAJ50618.1 - 0.13 12.6 0.2 0.69 10.3 0.1 2.2 3 0 0 3 3 3 0 Urease alpha-subunit, N-terminal domain Ald_Xan_dh_C2 PF02738.18 BAJ50619.1 - 5.3e-168 559.9 0.1 6.5e-168 559.6 0.1 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50619.1 - 1.2e-15 57.8 0.0 2.8e-15 56.6 0.0 1.7 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Gram_pos_anchor PF00746.21 BAJ50619.1 - 0.046 13.7 0.0 0.097 12.6 0.0 1.5 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Ald_Xan_dh_C2 PF02738.18 BAJ50620.1 - 6.3e-141 470.5 6.8 8.3e-141 470.1 6.8 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50620.1 - 5.8e-24 84.6 0.1 1.3e-23 83.4 0.1 1.7 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Iso_dh PF00180.20 BAJ50621.1 - 7.2e-90 301.6 0.0 8.5e-90 301.4 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase FAD_binding_2 PF00890.24 BAJ50622.1 - 5.3e-106 355.2 0.6 6.4e-106 354.9 0.6 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 BAJ50622.1 - 2.8e-36 124.3 0.2 4.2e-36 123.8 0.2 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 BAJ50622.1 - 1.9e-06 27.3 2.6 0.0002 20.7 1.1 3.0 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 BAJ50622.1 - 6.2e-05 22.2 0.6 0.00016 20.9 0.3 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 BAJ50622.1 - 0.0038 16.6 3.9 0.022 14.1 3.8 2.2 3 0 0 3 3 3 1 FAD dependent oxidoreductase DAO PF01266.24 BAJ50622.1 - 0.0083 15.7 0.3 0.016 14.8 0.1 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 BAJ50622.1 - 0.057 12.1 2.7 0.2 10.3 0.9 2.4 3 0 0 3 3 3 0 HI0933-like protein FAD_binding_3 PF01494.19 BAJ50622.1 - 0.065 12.5 0.9 0.12 11.6 0.9 1.4 1 0 0 1 1 1 0 FAD binding domain AlaDh_PNT_C PF01262.21 BAJ50622.1 - 0.091 12.0 0.4 0.23 10.7 0.4 1.6 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Sdh_cyt PF01127.22 BAJ50623.1 - 6.9e-13 48.7 1.1 1.2e-12 47.9 1.1 1.4 1 1 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OppC_N PF12911.7 BAJ50623.1 - 0.071 13.1 0.1 0.071 13.1 0.1 2.7 1 1 2 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C Ni_hydr_CYTB PF01292.20 BAJ50623.1 - 0.092 12.3 4.6 4.5 6.8 1.3 2.3 2 1 0 2 2 2 0 Prokaryotic cytochrome b561 Sdh_cyt PF01127.22 BAJ50624.1 - 8.5e-07 29.0 7.5 1.1e-06 28.7 7.5 1.2 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Fer2_3 PF13085.6 BAJ50625.1 - 4.2e-34 116.8 0.1 9.6e-34 115.7 0.0 1.6 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 BAJ50625.1 - 2.9e-09 37.3 0.9 2.9e-09 37.3 0.9 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 BAJ50625.1 - 1e-08 35.6 7.5 3.6e-07 30.6 0.8 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 BAJ50625.1 - 2.2e-08 34.5 13.3 3.6e-06 27.5 5.1 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ50625.1 - 2.7e-07 30.6 11.2 5.4e-06 26.5 2.5 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ50625.1 - 1.2e-06 28.5 3.9 1.2e-06 28.5 3.9 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 BAJ50625.1 - 7.1e-05 22.5 2.1 7.1e-05 22.5 2.1 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 BAJ50625.1 - 9.1e-05 23.3 2.9 9.1e-05 23.3 2.9 2.3 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 BAJ50625.1 - 0.00037 20.7 1.9 0.14 12.3 0.0 2.6 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 BAJ50625.1 - 0.00086 19.4 0.2 0.00086 19.4 0.2 2.8 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 BAJ50625.1 - 0.0018 18.7 0.6 0.0018 18.7 0.6 3.2 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 BAJ50625.1 - 0.0019 18.2 1.9 0.0019 18.2 1.9 3.0 3 0 0 3 3 2 1 4Fe-4S binding domain Fer2 PF00111.27 BAJ50625.1 - 0.0026 17.7 0.8 0.0083 16.1 0.1 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_20 PF14691.6 BAJ50625.1 - 0.006 16.3 2.0 1.2 9.0 0.0 2.3 1 1 1 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RdRP_1 PF00680.20 BAJ50625.1 - 0.032 12.8 0.0 0.042 12.4 0.0 1.1 1 0 0 1 1 1 0 RNA dependent RNA polymerase Fer4_22 PF17179.4 BAJ50625.1 - 0.06 14.2 4.8 0.17 12.7 0.6 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 BAJ50625.1 - 0.064 13.4 1.7 0.064 13.4 1.7 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_3 PF12798.7 BAJ50625.1 - 3.6 8.7 23.1 0.25 12.4 4.9 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain DUF373 PF04123.13 BAJ50626.1 - 3.2 7.1 13.7 0.43 10.0 5.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF373) CTP_transf_like PF01467.26 BAJ50627.1 - 1.9e-14 54.1 0.0 2.4e-14 53.7 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like Pantoate_ligase PF02569.15 BAJ50627.1 - 0.11 11.7 0.0 0.39 9.9 0.0 1.8 2 0 0 2 2 2 0 Pantoate-beta-alanine ligase DUF4199 PF13858.6 BAJ50628.1 - 0.14 12.6 0.3 0.15 12.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) HOOK PF05622.12 BAJ50629.1 - 0.00063 18.0 16.8 0.00085 17.6 16.8 1.2 1 0 0 1 1 1 1 HOOK protein RHD3 PF05879.12 BAJ50629.1 - 0.0069 14.6 6.0 0.0084 14.3 6.0 1.1 1 0 0 1 1 1 1 Root hair defective 3 GTP-binding protein (RHD3) Caudo_TAP PF02413.17 BAJ50629.1 - 0.027 14.6 2.4 0.027 14.6 2.4 2.0 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK ApoLp-III PF07464.11 BAJ50629.1 - 0.028 14.5 3.0 0.028 14.5 3.0 2.3 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DUF913 PF06025.12 BAJ50629.1 - 0.028 13.4 1.3 0.042 12.8 1.3 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Baculo_PEP_C PF04513.12 BAJ50629.1 - 0.029 14.4 8.1 1.4 9.0 2.8 2.3 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus HAUS-augmin3 PF14932.6 BAJ50629.1 - 0.036 13.7 11.4 0.052 13.1 11.4 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 SHE3 PF17078.5 BAJ50629.1 - 0.041 13.6 10.7 0.059 13.1 10.7 1.2 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 Taeniidae_ag PF05596.11 BAJ50629.1 - 0.054 13.5 4.1 0.88 9.6 0.9 2.6 2 0 0 2 2 2 0 Taeniidae antigen Spc7 PF08317.11 BAJ50629.1 - 0.057 12.3 17.4 0.083 11.8 17.4 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein CAP_N PF01213.19 BAJ50629.1 - 0.057 12.9 4.8 0.063 12.8 3.5 1.7 1 1 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Prominin PF05478.11 BAJ50629.1 - 0.075 11.0 10.6 0.24 9.3 10.6 1.6 1 1 0 1 1 1 0 Prominin AF0941-like PF14591.6 BAJ50629.1 - 0.12 12.9 12.3 0.15 12.7 10.3 1.9 1 1 1 2 2 2 0 AF0941-like Apolipoprotein PF01442.18 BAJ50629.1 - 0.14 12.0 21.4 0.33 10.8 20.9 1.7 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Gp-FAR-1 PF05823.12 BAJ50629.1 - 0.29 11.5 11.1 0.067 13.6 4.1 2.3 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) CmlA_N PF18456.1 BAJ50629.1 - 0.33 10.2 4.0 0.48 9.7 4.0 1.2 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain FUSC PF04632.12 BAJ50629.1 - 0.38 9.2 4.6 0.57 8.6 4.6 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein family PLC-beta_C PF08703.10 BAJ50629.1 - 0.38 10.7 20.9 0.61 10.0 6.6 2.7 1 1 1 2 2 2 0 PLC-beta C terminal Asp23 PF03780.13 BAJ50629.1 - 0.44 11.0 3.3 3.5 8.1 0.3 2.6 1 1 0 2 2 2 0 Asp23 family, cell envelope-related function MADF_DNA_bdg PF10545.9 BAJ50629.1 - 0.45 10.9 4.8 0.85 10.0 0.6 2.4 1 1 1 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like Retrotrans_gag PF03732.17 BAJ50629.1 - 0.51 10.6 6.8 9.9 6.5 0.2 2.9 1 1 1 2 2 2 0 Retrotransposon gag protein PhaP_Bmeg PF09602.10 BAJ50629.1 - 0.67 9.9 13.1 2.8 7.9 2.2 2.2 1 1 1 2 2 2 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) Snapin_Pallidin PF14712.6 BAJ50629.1 - 0.69 10.4 17.0 2.4 8.6 1.5 3.1 2 1 1 3 3 3 0 Snapin/Pallidin CdvA PF18822.1 BAJ50629.1 - 0.71 9.7 18.4 1.1 9.1 16.0 2.1 1 1 1 2 2 2 0 CdvA-like coiled-coil domain FAP206 PF12018.8 BAJ50629.1 - 0.76 9.2 8.1 1.2 8.6 8.1 1.4 1 0 0 1 1 1 0 Domain of unknown function Shugoshin_N PF07558.11 BAJ50629.1 - 0.77 9.7 10.1 0.75 9.7 1.1 2.7 2 1 0 2 2 2 0 Shugoshin N-terminal coiled-coil region DUF883 PF05957.13 BAJ50629.1 - 0.89 10.2 14.1 0.19 12.4 3.9 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF883) Arch_flagellin PF01917.16 BAJ50629.1 - 0.94 9.6 4.9 5 7.3 2.4 2.3 2 0 0 2 2 2 0 Archaebacterial flagellin SKA2 PF16740.5 BAJ50629.1 - 1.1 9.1 14.5 0.1 12.4 3.1 2.5 1 1 0 2 2 2 0 Spindle and kinetochore-associated protein 2 AAA_32 PF13654.6 BAJ50629.1 - 1.2 7.8 15.2 2.1 7.0 15.1 1.4 1 1 0 1 1 1 0 AAA domain YtxH PF12732.7 BAJ50629.1 - 1.4 9.5 11.8 2.8 8.6 5.6 2.9 2 1 0 2 2 2 0 YtxH-like protein OmpH PF03938.14 BAJ50629.1 - 1.5 9.2 22.2 6.8 7.0 20.6 2.1 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) DUF948 PF06103.11 BAJ50629.1 - 1.6 9.1 7.8 20 5.5 7.8 2.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Rootletin PF15035.6 BAJ50629.1 - 1.6 8.7 16.0 4.2 7.3 15.3 1.9 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Mt_ATP-synt_D PF05873.12 BAJ50629.1 - 1.7 8.5 10.0 4 7.3 1.6 2.2 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) Golgin_A5 PF09787.9 BAJ50629.1 - 2 7.8 19.5 1.6 8.1 17.1 1.6 1 1 0 1 1 1 0 Golgin subfamily A member 5 Exonuc_VII_L PF02601.15 BAJ50629.1 - 2.4 7.7 14.0 3.9 7.0 14.0 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit Muted PF14942.6 BAJ50629.1 - 3.7 7.9 16.8 1.9 8.8 9.7 2.1 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein IZUMO PF15005.6 BAJ50629.1 - 4.7 7.7 10.0 7.7 7.0 8.1 1.9 1 1 1 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated TMF_DNA_bd PF12329.8 BAJ50629.1 - 7.5 6.6 19.7 4.3 7.4 11.1 2.9 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding Atg14 PF10186.9 BAJ50629.1 - 7.6 5.5 15.1 14 4.6 15.2 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3135 PF11333.8 BAJ50629.1 - 9.8 6.5 8.4 5.1 7.4 1.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3135) HTH_IclR PF09339.10 BAJ50630.1 - 9e-09 35.0 0.1 1.9e-08 34.0 0.1 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 BAJ50630.1 - 1.7e-08 34.2 0.4 4.1e-08 33.0 0.4 1.6 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 BAJ50630.1 - 2.8e-07 30.0 0.0 5.7e-07 29.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 BAJ50630.1 - 3.9e-06 26.7 0.0 8.1e-06 25.7 0.0 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 BAJ50630.1 - 1.4e-05 24.8 0.3 3.3e-05 23.7 0.3 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 BAJ50630.1 - 1.7e-05 24.6 0.0 3.1e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 BAJ50630.1 - 2.7e-05 24.1 0.3 5.5e-05 23.1 0.3 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_20 PF12840.7 BAJ50630.1 - 7.5e-05 22.7 0.3 0.00014 21.8 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4897 PF16238.5 BAJ50630.1 - 0.00024 21.0 0.0 0.00032 20.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4897) Penicillinase_R PF03965.16 BAJ50630.1 - 0.0003 21.1 0.3 0.00059 20.2 0.3 1.4 1 0 0 1 1 1 1 Penicillinase repressor HTH_28 PF13518.6 BAJ50630.1 - 0.00052 20.1 0.3 0.0011 19.0 0.1 1.7 2 0 0 2 2 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 BAJ50630.1 - 0.00053 19.5 0.2 0.0011 18.4 0.2 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 BAJ50630.1 - 0.0014 18.3 0.1 0.0034 17.1 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_8 PF02954.19 BAJ50630.1 - 0.0046 16.7 0.1 0.012 15.4 0.1 1.8 1 1 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_11 PF08279.12 BAJ50630.1 - 0.0047 16.9 0.0 0.0085 16.0 0.0 1.3 1 0 0 1 1 1 1 HTH domain CENP-B_N PF04218.13 BAJ50630.1 - 0.0071 15.9 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain Sigma70_r4_2 PF08281.12 BAJ50630.1 - 0.013 15.2 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Fe_dep_repress PF01325.19 BAJ50630.1 - 0.029 14.6 0.2 0.061 13.5 0.2 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_29 PF13551.6 BAJ50630.1 - 0.032 14.3 0.1 0.077 13.0 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn helix HTH_38 PF13936.6 BAJ50630.1 - 0.032 14.0 0.0 0.057 13.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 BAJ50630.1 - 0.035 14.5 0.1 0.087 13.2 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator GntR PF00392.21 BAJ50630.1 - 0.038 13.7 1.7 0.12 12.0 0.8 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_7 PF02796.15 BAJ50630.1 - 0.039 14.0 0.0 0.1 12.7 0.0 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain of resolvase HTH_AsnC-type PF13404.6 BAJ50630.1 - 0.073 12.9 0.1 0.4 10.6 0.0 2.3 2 1 1 3 3 3 0 AsnC-type helix-turn-helix domain Crp PF00325.20 BAJ50630.1 - 0.084 12.6 0.5 0.59 9.8 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family RNA_pol_Rpc34 PF05158.12 BAJ50630.1 - 0.15 11.4 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit Actin PF00022.19 BAJ50631.1 - 1.3e-16 60.2 0.0 2.1e-14 53.0 0.0 2.2 1 1 0 1 1 1 1 Actin HSBP1 PF06825.12 BAJ50632.1 - 0.032 14.1 1.4 0.74 9.7 0.1 2.4 2 0 0 2 2 2 0 Heat shock factor binding protein 1 DUF1819 PF08849.11 BAJ50632.1 - 0.069 13.0 0.0 0.23 11.2 0.0 1.7 2 0 0 2 2 2 0 Putative inner membrane protein (DUF1819) Cupin_4 PF08007.12 BAJ50632.1 - 0.13 11.7 0.1 0.17 11.3 0.1 1.2 1 0 0 1 1 1 0 Cupin superfamily protein MS_channel PF00924.18 BAJ50633.1 - 8.4e-31 107.1 0.4 1.4e-30 106.4 0.4 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel SseB_C PF14581.6 BAJ50633.1 - 0.017 15.2 0.1 0.029 14.5 0.1 1.3 1 0 0 1 1 1 0 SseB protein C-terminal domain DUF2647 PF10839.8 BAJ50633.1 - 0.11 12.5 0.0 1.5 8.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2647) DUF2470 PF10615.9 BAJ50633.1 - 0.22 12.2 0.0 0.36 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2470) VIT1 PF01988.19 BAJ50634.1 - 4.6e-07 29.9 17.1 3.2e-05 23.9 4.3 2.0 1 1 1 2 2 2 2 VIT family LapA_dom PF06305.11 BAJ50634.1 - 0.67 9.8 0.0 0.67 9.8 0.0 3.7 3 1 1 4 4 4 0 Lipopolysaccharide assembly protein A domain IF-2B PF01008.17 BAJ50635.1 - 9.4e-85 284.2 0.1 1.1e-84 284.0 0.1 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family Pyr_redox_2 PF07992.14 BAJ50636.1 - 2.9e-18 66.1 0.0 2.1e-09 37.0 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 BAJ50636.1 - 4.8e-07 29.7 0.1 0.0016 18.1 0.0 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox PF00070.27 BAJ50636.1 - 4.1e-06 27.3 0.2 0.0092 16.5 0.0 3.2 4 0 0 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 BAJ50636.1 - 8.5e-05 22.7 0.0 0.00028 21.0 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 BAJ50636.1 - 0.0014 18.7 0.6 0.35 10.8 0.0 2.4 2 0 0 2 2 2 2 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 BAJ50636.1 - 0.0023 17.1 0.0 0.015 14.4 0.0 2.1 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 BAJ50636.1 - 0.0074 15.6 0.0 7.1 5.8 0.0 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 BAJ50636.1 - 0.24 10.2 0.0 0.34 9.7 0.0 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Aconitase PF00330.20 BAJ50637.1 - 2.6e-178 593.8 0.0 3.4e-178 593.4 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 BAJ50637.1 - 8.8e-43 145.8 0.0 1.4e-42 145.1 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Spc7 PF08317.11 BAJ50638.1 - 5.7e-06 25.4 5.1 9.3e-06 24.7 5.1 1.3 1 0 0 1 1 1 1 Spc7 kinetochore protein CENP-F_leu_zip PF10473.9 BAJ50638.1 - 0.00017 21.6 12.6 0.00031 20.8 12.6 1.3 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Reprolysin_5 PF13688.6 BAJ50638.1 - 0.00036 20.7 0.0 0.001 19.3 0.0 1.8 2 0 0 2 2 1 1 Metallo-peptidase family M12 Reprolysin_3 PF13582.6 BAJ50638.1 - 0.00051 20.6 0.1 0.0031 18.0 0.0 2.1 2 0 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like DUF2730 PF10805.8 BAJ50638.1 - 0.00066 19.7 2.7 0.0015 18.6 1.3 2.2 1 1 0 2 2 1 1 Protein of unknown function (DUF2730) TPR_MLP1_2 PF07926.12 BAJ50638.1 - 0.00069 19.7 17.6 0.023 14.7 8.1 2.5 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein AAA_13 PF13166.6 BAJ50638.1 - 0.00072 18.3 1.8 0.00096 17.9 1.8 1.1 1 0 0 1 1 1 1 AAA domain CCDC-167 PF15188.6 BAJ50638.1 - 0.0014 18.9 3.5 0.0014 18.9 3.5 3.0 2 1 1 3 3 3 1 Coiled-coil domain-containing protein 167 Exonuc_VII_L PF02601.15 BAJ50638.1 - 0.0014 18.2 0.9 0.0022 17.6 0.9 1.3 1 0 0 1 1 1 1 Exonuclease VII, large subunit Reprolysin_4 PF13583.6 BAJ50638.1 - 0.0016 18.1 0.6 0.023 14.3 0.2 2.3 2 0 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like FPP PF05911.11 BAJ50638.1 - 0.0019 16.5 4.1 0.0026 16.1 4.1 1.1 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil Filament PF00038.21 BAJ50638.1 - 0.0025 17.5 7.7 0.0047 16.6 7.7 1.4 1 0 0 1 1 1 1 Intermediate filament protein DUF4407 PF14362.6 BAJ50638.1 - 0.0026 17.2 4.9 0.0042 16.5 4.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Tropomyosin_1 PF12718.7 BAJ50638.1 - 0.0038 17.4 15.7 0.0067 16.6 15.7 1.3 1 0 0 1 1 1 1 Tropomyosin like OmpH PF03938.14 BAJ50638.1 - 0.0042 17.4 3.9 0.011 16.0 3.9 1.7 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) CCDC144C PF14915.6 BAJ50638.1 - 0.0043 16.2 4.4 0.0064 15.7 4.4 1.1 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region MAD PF05557.13 BAJ50638.1 - 0.0045 15.4 5.8 0.0068 14.8 5.8 1.1 1 0 0 1 1 1 1 Mitotic checkpoint protein EzrA PF06160.12 BAJ50638.1 - 0.0057 14.9 2.9 0.012 13.8 2.9 1.5 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA HOOK PF05622.12 BAJ50638.1 - 0.0084 14.3 4.7 0.012 13.8 4.7 1.1 1 0 0 1 1 1 1 HOOK protein DUF812 PF05667.11 BAJ50638.1 - 0.01 14.8 9.1 0.018 14.0 9.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF4953 PF16313.5 BAJ50638.1 - 0.021 14.1 0.2 0.045 13.0 0.2 1.5 1 0 0 1 1 1 0 Met-zincin DUF1664 PF07889.12 BAJ50638.1 - 0.025 14.6 3.7 0.16 12.0 3.7 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Leu_zip PF15294.6 BAJ50638.1 - 0.039 13.5 4.6 0.063 12.8 4.6 1.2 1 0 0 1 1 1 0 Leucine zipper ATG16 PF08614.11 BAJ50638.1 - 0.04 14.1 16.9 0.1 12.8 17.0 1.5 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) FlaC_arch PF05377.11 BAJ50638.1 - 0.047 14.1 4.4 0.86 10.1 0.3 3.2 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) CALCOCO1 PF07888.11 BAJ50638.1 - 0.051 12.4 10.8 0.077 11.9 10.8 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like IFT57 PF10498.9 BAJ50638.1 - 0.065 12.2 3.6 0.12 11.3 3.6 1.4 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Atg14 PF10186.9 BAJ50638.1 - 0.068 12.2 4.3 0.14 11.2 4.3 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Reprolysin_2 PF13574.6 BAJ50638.1 - 0.077 12.9 1.4 0.17 11.7 0.3 1.9 2 0 0 2 2 2 0 Metallo-peptidase family M12B Reprolysin-like Laminin_II PF06009.12 BAJ50638.1 - 0.08 13.0 5.0 0.21 11.6 5.0 1.6 1 0 0 1 1 1 0 Laminin Domain II T3SSipB PF16535.5 BAJ50638.1 - 0.088 13.3 4.8 0.15 12.5 4.8 1.3 1 0 0 1 1 1 0 Type III cell invasion protein SipB TMF_TATA_bd PF12325.8 BAJ50638.1 - 0.089 13.0 13.0 0.51 10.6 8.2 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Fez1 PF06818.15 BAJ50638.1 - 0.089 13.2 7.2 0.16 12.4 7.2 1.3 1 0 0 1 1 1 0 Fez1 V-SNARE PF05008.15 BAJ50638.1 - 0.092 13.1 5.6 0.27 11.6 5.6 1.9 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus DUF3584 PF12128.8 BAJ50638.1 - 0.093 10.2 11.0 0.13 9.7 11.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Jnk-SapK_ap_N PF09744.9 BAJ50638.1 - 0.1 12.8 8.0 0.2 11.9 8.0 1.4 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 V_ATPase_I PF01496.19 BAJ50638.1 - 0.1 10.5 1.1 0.2 9.5 1.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TMPIT PF07851.13 BAJ50638.1 - 0.11 11.7 0.3 0.2 10.9 0.3 1.4 1 0 0 1 1 1 0 TMPIT-like protein FapA PF03961.13 BAJ50638.1 - 0.11 11.0 0.8 0.2 10.3 0.8 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A PEARLI-4 PF05278.12 BAJ50638.1 - 0.13 11.9 3.9 0.27 10.8 3.9 1.5 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) BLOC1_2 PF10046.9 BAJ50638.1 - 0.14 12.5 5.0 0.65 10.3 5.0 2.1 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GAS PF13851.6 BAJ50638.1 - 0.15 11.4 15.4 0.037 13.4 11.2 1.9 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding HrpB7 PF09486.10 BAJ50638.1 - 0.15 12.4 17.9 0.094 13.1 14.0 1.9 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) DHR10 PF18595.1 BAJ50638.1 - 0.23 11.5 19.1 1.7 8.7 16.9 2.4 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain bZIP_1 PF00170.21 BAJ50638.1 - 0.24 11.5 8.0 3 8.0 1.0 2.9 2 1 1 3 3 2 0 bZIP transcription factor HMMR_N PF15905.5 BAJ50638.1 - 0.32 10.4 9.1 0.52 9.7 9.1 1.2 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DASH_Spc19 PF08287.11 BAJ50638.1 - 0.33 10.8 13.8 1.2 9.0 9.7 2.5 2 1 1 3 3 3 0 Spc19 zf-C4H2 PF10146.9 BAJ50638.1 - 0.41 10.9 5.5 0.82 9.9 5.5 1.4 1 0 0 1 1 1 0 Zinc finger-containing protein Seryl_tRNA_N PF02403.22 BAJ50638.1 - 0.43 10.8 10.0 4.4 7.6 4.0 2.4 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain FAM76 PF16046.5 BAJ50638.1 - 0.43 9.9 3.3 0.65 9.3 3.3 1.1 1 0 0 1 1 1 0 FAM76 protein Golgin_A5 PF09787.9 BAJ50638.1 - 0.43 10.0 8.7 0.85 9.0 8.7 1.4 1 0 0 1 1 1 0 Golgin subfamily A member 5 LPP PF04728.13 BAJ50638.1 - 0.43 11.0 4.9 24 5.4 0.0 3.4 3 1 1 4 4 3 0 Lipoprotein leucine-zipper DUF724 PF05266.14 BAJ50638.1 - 0.46 10.3 5.0 0.87 9.4 5.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Phage_GPO PF05929.11 BAJ50638.1 - 0.47 10.0 3.2 1.1 8.8 3.2 1.6 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase FUSC PF04632.12 BAJ50638.1 - 0.48 8.9 4.8 0.74 8.3 4.8 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Fzo_mitofusin PF04799.13 BAJ50638.1 - 0.49 9.9 5.2 0.82 9.2 1.9 2.3 1 1 1 2 2 2 0 fzo-like conserved region Mod_r PF07200.13 BAJ50638.1 - 0.57 10.3 8.8 0.18 11.9 5.1 2.0 2 1 0 2 2 1 0 Modifier of rudimentary (Mod(r)) protein YkyA PF10368.9 BAJ50638.1 - 0.57 9.8 5.3 1.4 8.5 5.3 1.6 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein ABC_tran_CTD PF16326.5 BAJ50638.1 - 0.64 10.3 14.3 13 6.1 13.5 2.8 2 1 0 2 2 1 0 ABC transporter C-terminal domain HAUS5 PF14817.6 BAJ50638.1 - 0.72 8.5 11.4 1.1 7.9 11.4 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 5 CLZ PF16526.5 BAJ50638.1 - 0.74 10.2 12.3 0.75 10.2 1.4 3.4 1 1 2 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4140 PF13600.6 BAJ50638.1 - 0.91 10.0 16.6 1.3 9.5 3.9 2.4 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Prefoldin_2 PF01920.20 BAJ50638.1 - 0.97 9.4 11.1 5.9 6.9 0.1 3.5 2 1 2 4 4 3 0 Prefoldin subunit TolA_bind_tri PF16331.5 BAJ50638.1 - 1.1 9.4 9.8 0.34 11.0 1.2 2.8 1 1 1 2 2 2 0 TolA binding protein trimerisation BRE1 PF08647.11 BAJ50638.1 - 1.1 9.3 8.9 4.2 7.5 8.9 2.0 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase PRKG1_interact PF15898.5 BAJ50638.1 - 1.2 10.1 9.6 3.2 8.7 9.6 1.7 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Vps5 PF09325.10 BAJ50638.1 - 1.2 8.6 6.9 1.5 8.3 4.4 2.0 1 1 1 2 2 2 0 Vps5 C terminal like XhlA PF10779.9 BAJ50638.1 - 1.8 8.8 4.4 1.3 9.3 0.9 2.6 2 1 1 3 3 1 0 Haemolysin XhlA Phage_GP20 PF06810.11 BAJ50638.1 - 1.9 8.3 5.2 2.9 7.7 3.1 1.9 1 1 0 1 1 1 0 Phage minor structural protein GP20 DUF3450 PF11932.8 BAJ50638.1 - 2.1 7.6 11.2 5.7 6.2 3.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF2203 PF09969.9 BAJ50638.1 - 2.3 8.9 7.3 22 5.8 7.3 2.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) NPV_P10 PF05531.12 BAJ50638.1 - 2.5 8.6 6.9 0.34 11.4 1.2 2.4 2 1 1 3 3 1 0 Nucleopolyhedrovirus P10 protein AAA_23 PF13476.6 BAJ50638.1 - 3.2 8.2 5.6 1.1 9.7 3.0 1.7 2 0 0 2 2 1 0 AAA domain Snapin_Pallidin PF14712.6 BAJ50638.1 - 3.7 8.0 8.6 2.6 8.5 1.5 2.8 2 1 1 3 3 2 0 Snapin/Pallidin FliJ PF02050.16 BAJ50638.1 - 4.5 7.5 15.8 2.6 8.3 2.9 2.7 2 1 1 3 3 2 0 Flagellar FliJ protein Uso1_p115_C PF04871.13 BAJ50638.1 - 4.6 7.6 13.3 13 6.2 13.2 1.8 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region COG2 PF06148.11 BAJ50638.1 - 4.9 7.3 7.8 55 3.8 7.5 2.5 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DivIVA PF05103.13 BAJ50638.1 - 6.4 6.9 10.0 12 6.0 10.0 1.4 1 0 0 1 1 1 0 DivIVA protein Fib_alpha PF08702.10 BAJ50638.1 - 6.7 6.9 6.6 1.8 8.8 2.9 1.8 2 0 0 2 2 1 0 Fibrinogen alpha/beta chain family DUF4618 PF15397.6 BAJ50638.1 - 6.8 6.0 11.2 8.2 5.8 2.6 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4618) TMF_DNA_bd PF12329.8 BAJ50638.1 - 7.4 6.7 13.7 10 6.2 6.4 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Reprolysin_4 PF13583.6 BAJ50639.1 - 4e-05 23.3 0.0 6.9e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like GAS PF13851.6 BAJ50639.1 - 4.6e-05 22.8 18.7 0.0011 18.3 16.6 2.2 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding Exonuc_VII_L PF02601.15 BAJ50639.1 - 6.2e-05 22.7 4.2 6.2e-05 22.7 4.2 1.4 2 0 0 2 2 1 1 Exonuclease VII, large subunit Reprolysin_5 PF13688.6 BAJ50639.1 - 9.5e-05 22.6 0.5 0.00038 20.7 0.0 2.0 2 0 0 2 2 1 1 Metallo-peptidase family M12 TMPIT PF07851.13 BAJ50639.1 - 9.7e-05 21.8 4.8 0.00013 21.3 4.8 1.2 1 0 0 1 1 1 1 TMPIT-like protein Jnk-SapK_ap_N PF09744.9 BAJ50639.1 - 0.00022 21.5 15.8 0.00056 20.2 15.8 1.6 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 CENP-H PF05837.12 BAJ50639.1 - 0.00067 20.0 11.2 0.0014 19.0 11.2 1.5 1 0 0 1 1 1 1 Centromere protein H (CENP-H) Laminin_II PF06009.12 BAJ50639.1 - 0.0011 19.0 11.0 0.0021 18.1 11.0 1.3 1 0 0 1 1 1 1 Laminin Domain II DUF4953 PF16313.5 BAJ50639.1 - 0.0013 18.0 0.3 0.0013 18.0 0.3 2.0 2 0 0 2 2 2 1 Met-zincin Reprolysin_3 PF13582.6 BAJ50639.1 - 0.0014 19.1 0.6 0.0029 18.1 0.0 1.8 2 0 0 2 2 1 1 Metallo-peptidase family M12B Reprolysin-like Atg14 PF10186.9 BAJ50639.1 - 0.0022 17.2 10.5 0.0035 16.5 10.5 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 KASH_CCD PF14662.6 BAJ50639.1 - 0.0024 17.7 18.3 0.0041 17.0 18.3 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH APG6_N PF17675.1 BAJ50639.1 - 0.0027 18.2 17.9 0.0079 16.7 17.9 1.8 1 0 0 1 1 1 1 Apg6 coiled-coil region DUF812 PF05667.11 BAJ50639.1 - 0.003 16.5 8.3 0.0041 16.1 8.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Filament PF00038.21 BAJ50639.1 - 0.0034 17.0 11.7 0.0064 16.1 11.7 1.3 1 0 0 1 1 1 1 Intermediate filament protein Peptidase_M10 PF00413.24 BAJ50639.1 - 0.0071 16.2 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 Matrixin OmpH PF03938.14 BAJ50639.1 - 0.0076 16.6 10.8 0.021 15.2 10.8 1.7 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) FapA PF03961.13 BAJ50639.1 - 0.014 14.1 6.3 0.02 13.5 6.3 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Macoilin PF09726.9 BAJ50639.1 - 0.021 13.4 14.5 0.03 12.9 14.5 1.1 1 0 0 1 1 1 0 Macoilin family LMBR1 PF04791.16 BAJ50639.1 - 0.022 13.7 1.0 0.033 13.1 1.0 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4795 PF16043.5 BAJ50639.1 - 0.022 14.4 13.6 0.017 14.7 12.2 1.4 2 0 0 2 2 1 0 Domain of unknown function (DUF4795) ATG16 PF08614.11 BAJ50639.1 - 0.027 14.7 16.2 0.051 13.8 16.2 1.4 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Reprolysin PF01421.19 BAJ50639.1 - 0.028 14.3 0.0 0.054 13.4 0.0 1.4 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease WEMBL PF05701.11 BAJ50639.1 - 0.029 13.1 12.2 0.042 12.6 12.2 1.1 1 0 0 1 1 1 0 Weak chloroplast movement under blue light Astacin PF01400.24 BAJ50639.1 - 0.031 13.9 0.1 0.056 13.1 0.1 1.3 1 0 0 1 1 1 0 Astacin (Peptidase family M12A) CorA PF01544.18 BAJ50639.1 - 0.034 13.4 8.7 0.059 12.7 8.7 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein FUSC PF04632.12 BAJ50639.1 - 0.036 12.6 4.0 0.073 11.6 4.0 1.4 1 0 0 1 1 1 0 Fusaric acid resistance protein family Peptidase_M54 PF07998.11 BAJ50639.1 - 0.048 13.7 0.1 0.17 11.9 0.0 1.9 2 0 0 2 2 1 0 Peptidase family M54 Peptidase_M57 PF12388.8 BAJ50639.1 - 0.058 13.0 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase IFT57 PF10498.9 BAJ50639.1 - 0.058 12.3 12.3 0.1 11.6 12.3 1.3 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 CENP-F_leu_zip PF10473.9 BAJ50639.1 - 0.064 13.3 21.1 0.47 10.5 21.1 2.1 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BLOC1_2 PF10046.9 BAJ50639.1 - 0.068 13.5 13.0 1.1 9.6 4.3 2.6 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FTA4 PF13093.6 BAJ50639.1 - 0.077 12.9 5.7 0.12 12.3 5.7 1.3 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 DUF4407 PF14362.6 BAJ50639.1 - 0.087 12.2 10.1 0.15 11.4 10.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SHE3 PF17078.5 BAJ50639.1 - 0.087 12.5 7.4 0.22 11.2 7.4 1.6 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 Not3 PF04065.15 BAJ50639.1 - 0.098 12.1 7.6 0.22 10.9 7.6 1.5 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component Seryl_tRNA_N PF02403.22 BAJ50639.1 - 0.099 12.9 15.5 0.8 10.0 3.6 2.4 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain She9_MDM33 PF05546.11 BAJ50639.1 - 0.12 12.2 9.0 0.29 10.9 9.0 1.7 1 0 0 1 1 1 0 She9 / Mdm33 family Uso1_p115_C PF04871.13 BAJ50639.1 - 0.12 12.8 16.5 0.29 11.5 16.5 1.6 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Effector_1 PF04518.12 BAJ50639.1 - 0.14 11.3 6.7 0.38 9.8 6.7 1.7 1 0 0 1 1 1 0 Effector from type III secretion system PRKG1_interact PF15898.5 BAJ50639.1 - 0.15 12.9 16.2 0.26 12.2 13.9 2.2 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DegS PF05384.11 BAJ50639.1 - 0.19 11.2 12.0 0.37 10.3 12.0 1.4 1 0 0 1 1 1 0 Sensor protein DegS PCRF PF03462.18 BAJ50639.1 - 0.2 11.5 7.9 0.4 10.5 7.9 1.4 1 0 0 1 1 1 0 PCRF domain DUF4201 PF13870.6 BAJ50639.1 - 0.21 11.3 13.1 0.48 10.1 13.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) TPR_MLP1_2 PF07926.12 BAJ50639.1 - 0.22 11.6 23.3 0.6 10.2 23.3 1.6 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein FlaC_arch PF05377.11 BAJ50639.1 - 0.27 11.6 11.5 4.3 7.8 2.2 3.0 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) AIP3 PF03915.13 BAJ50639.1 - 0.27 10.3 10.2 0.4 9.7 10.2 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 HrpB7 PF09486.10 BAJ50639.1 - 0.28 11.5 18.3 0.9 9.9 18.3 1.7 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) CCD48 PF15799.5 BAJ50639.1 - 0.29 9.4 11.4 0.41 8.9 11.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 Tup_N PF08581.10 BAJ50639.1 - 0.29 11.5 15.9 0.3 11.4 6.5 2.6 1 1 1 2 2 2 0 Tup N-terminal Fungal_TACC PF12709.7 BAJ50639.1 - 0.31 11.5 15.0 6.2 7.3 3.3 3.8 2 1 2 4 4 4 0 Fungal Transforming acidic coiled-coil (TACC) proteins 3-PAP PF12578.8 BAJ50639.1 - 0.32 10.7 5.2 1.5 8.6 0.3 2.5 2 0 0 2 2 2 0 Myotubularin-associated protein Perilipin PF03036.16 BAJ50639.1 - 0.32 10.0 11.7 0.5 9.3 11.7 1.2 1 0 0 1 1 1 0 Perilipin family Phage_GPO PF05929.11 BAJ50639.1 - 0.34 10.5 9.6 0.55 9.8 9.6 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase BRE1 PF08647.11 BAJ50639.1 - 0.35 11.0 17.5 1.1 9.3 17.2 1.9 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase DUF745 PF05335.13 BAJ50639.1 - 0.35 10.6 14.4 0.67 9.6 14.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 BAJ50639.1 - 0.36 10.9 11.5 0.64 10.1 3.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) HMMR_N PF15905.5 BAJ50639.1 - 0.38 10.2 16.4 0.67 9.4 16.4 1.3 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF724 PF05266.14 BAJ50639.1 - 0.39 10.5 12.0 0.72 9.6 12.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) CwsA PF10814.8 BAJ50639.1 - 0.39 10.9 2.5 0.89 9.7 2.4 1.7 1 1 0 1 1 1 0 Cell wall synthesis protein CwsA ApoO PF09769.9 BAJ50639.1 - 0.4 10.7 4.2 10 6.1 4.2 2.5 1 1 0 1 1 1 0 Apolipoprotein O Golgin_A5 PF09787.9 BAJ50639.1 - 0.43 10.0 16.4 0.83 9.1 16.4 1.4 1 0 0 1 1 1 0 Golgin subfamily A member 5 Prefoldin_2 PF01920.20 BAJ50639.1 - 0.46 10.4 19.7 31 4.6 19.9 2.8 1 1 0 1 1 1 0 Prefoldin subunit HOOK PF05622.12 BAJ50639.1 - 0.47 8.5 15.0 0.67 8.0 15.0 1.1 1 0 0 1 1 1 0 HOOK protein AAA_11 PF13086.6 BAJ50639.1 - 0.48 10.2 5.3 0.76 9.5 5.3 1.2 1 0 0 1 1 1 0 AAA domain DUF3584 PF12128.8 BAJ50639.1 - 0.51 7.8 15.0 0.79 7.2 15.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) HAUS5 PF14817.6 BAJ50639.1 - 0.74 8.5 19.4 2.6 6.7 19.4 1.7 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 5 XhlA PF10779.9 BAJ50639.1 - 0.74 10.1 7.2 3.8 7.8 0.8 2.7 2 0 0 2 2 2 0 Haemolysin XhlA EzrA PF06160.12 BAJ50639.1 - 0.76 7.9 12.7 2.3 6.3 12.6 1.5 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA Spc7 PF08317.11 BAJ50639.1 - 0.77 8.6 20.3 2.9 6.7 20.3 1.8 1 1 0 1 1 1 0 Spc7 kinetochore protein JIP_LZII PF16471.5 BAJ50639.1 - 0.78 9.9 14.8 0.072 13.3 2.9 2.6 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II PEARLI-4 PF05278.12 BAJ50639.1 - 0.9 9.1 7.2 2 8.0 7.2 1.6 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) Tropomyosin_1 PF12718.7 BAJ50639.1 - 0.99 9.5 19.5 0.6 10.2 8.3 2.2 1 1 1 2 2 2 0 Tropomyosin like DUF4337 PF14235.6 BAJ50639.1 - 1 9.5 5.3 2 8.5 5.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DASH_Spc19 PF08287.11 BAJ50639.1 - 1.2 9.0 16.4 0.78 9.6 12.6 2.4 3 0 0 3 3 1 0 Spc19 TMF_DNA_bd PF12329.8 BAJ50639.1 - 1.2 9.1 22.4 2.5 8.2 10.9 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Fib_alpha PF08702.10 BAJ50639.1 - 1.5 9.0 13.2 3.3 7.9 13.2 1.6 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family UPF0242 PF06785.11 BAJ50639.1 - 1.5 8.9 12.0 3.1 7.9 12.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus AAA_13 PF13166.6 BAJ50639.1 - 1.5 7.3 11.6 5.5 5.5 11.4 1.6 1 1 0 1 1 1 0 AAA domain DUF2046 PF09755.9 BAJ50639.1 - 1.8 7.7 17.0 7.2 5.8 17.0 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) bZIP_2 PF07716.15 BAJ50639.1 - 2.1 8.5 25.1 3.5 7.8 5.0 3.7 2 1 1 3 3 3 0 Basic region leucine zipper Cnn_1N PF07989.11 BAJ50639.1 - 2.2 8.5 17.7 4.1 7.6 0.6 2.7 1 1 0 2 2 2 0 Centrosomin N-terminal motif 1 Wtap PF17098.5 BAJ50639.1 - 2.3 8.1 16.8 0.22 11.5 9.2 2.2 1 1 1 2 2 2 0 WTAP/Mum2p family FAM76 PF16046.5 BAJ50639.1 - 2.5 7.4 9.3 4.3 6.6 9.3 1.3 1 0 0 1 1 1 0 FAM76 protein ADIP PF11559.8 BAJ50639.1 - 2.5 8.2 20.8 33 4.5 20.3 2.1 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF2203 PF09969.9 BAJ50639.1 - 2.6 8.8 13.6 62 4.3 12.4 2.6 2 1 0 2 2 1 0 Uncharacterized conserved protein (DUF2203) T3SSipB PF16535.5 BAJ50639.1 - 2.6 8.5 12.5 15 6.0 6.7 2.3 1 1 1 2 2 2 0 Type III cell invasion protein SipB Prominin PF05478.11 BAJ50639.1 - 2.7 5.9 6.9 4 5.3 6.9 1.1 1 0 0 1 1 1 0 Prominin Cep57_CLD_2 PF14197.6 BAJ50639.1 - 2.7 8.1 16.2 4.2 7.5 0.7 3.0 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 TMF_TATA_bd PF12325.8 BAJ50639.1 - 2.8 8.2 18.8 2.2 8.5 14.1 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Med9 PF07544.13 BAJ50639.1 - 3.1 7.9 15.2 1.1 9.5 1.0 2.7 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF2730 PF10805.8 BAJ50639.1 - 3.5 7.8 9.4 3.8 7.6 5.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Nup88 PF10168.9 BAJ50639.1 - 3.6 5.3 11.7 5.5 4.7 11.7 1.2 1 0 0 1 1 1 0 Nuclear pore component Syntaxin_2 PF14523.6 BAJ50639.1 - 3.6 8.0 11.3 7.3 7.0 11.3 1.5 1 0 0 1 1 1 0 Syntaxin-like protein Mod_r PF07200.13 BAJ50639.1 - 3.8 7.6 21.7 2 8.5 18.5 2.1 2 1 0 2 2 1 0 Modifier of rudimentary (Mod(r)) protein Uds1 PF15456.6 BAJ50639.1 - 4.3 7.5 15.2 2 8.6 7.1 2.2 1 1 1 2 2 2 0 Up-regulated During Septation ArAE_2_N PF10337.9 BAJ50639.1 - 4.5 6.2 5.7 8 5.4 5.7 1.3 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal Phlebovirus_NSM PF07246.11 BAJ50639.1 - 4.5 6.6 9.3 9.6 5.5 9.3 1.4 1 1 0 1 1 1 0 Phlebovirus nonstructural protein NS-M HemX PF04375.14 BAJ50639.1 - 4.6 6.4 20.2 0.29 10.4 8.0 2.3 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF1640 PF07798.11 BAJ50639.1 - 5.3 7.0 13.7 21 5.1 13.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) ISG65-75 PF11727.8 BAJ50639.1 - 5.4 6.2 7.3 4 6.6 5.6 1.5 1 1 0 1 1 1 0 Invariant surface glycoprotein Myc-LZ PF02344.15 BAJ50639.1 - 5.5 7.2 12.7 0.61 10.2 3.1 3.1 3 0 0 3 3 2 0 Myc leucine zipper domain betaPIX_CC PF16523.5 BAJ50639.1 - 6.1 6.7 14.7 0.28 11.0 3.3 2.5 1 1 1 2 2 2 0 betaPIX coiled coil DUF4763 PF15960.5 BAJ50639.1 - 6.4 6.0 18.8 0.68 9.2 9.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4763) Nas2_N PF18265.1 BAJ50639.1 - 6.8 6.7 10.5 0.87 9.6 1.0 3.2 2 1 0 2 2 2 0 Nas2 N_terminal domain Cluap1 PF10234.9 BAJ50639.1 - 7.2 5.9 14.3 12 5.3 14.3 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 V_ATPase_I PF01496.19 BAJ50639.1 - 7.5 4.3 7.6 12 3.7 7.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family YscO PF07321.12 BAJ50639.1 - 7.8 6.4 26.0 10 6.1 15.4 2.6 2 1 1 3 3 2 0 Type III secretion protein YscO BST2 PF16716.5 BAJ50639.1 - 8.9 7.0 18.9 18 6.0 12.1 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF3847 PF12958.7 BAJ50639.1 - 10 6.3 18.5 10 6.3 9.9 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3847) HTH_3 PF01381.22 BAJ50640.1 - 1.3e-10 41.2 0.6 1.9e-10 40.6 0.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 BAJ50640.1 - 1.2e-08 35.2 0.0 1.5e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 BAJ50640.1 - 3e-08 33.6 0.1 4.5e-08 33.0 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 BAJ50640.1 - 8.5e-05 22.3 0.2 0.00018 21.3 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 BAJ50640.1 - 0.0033 17.5 0.1 0.0045 17.1 0.1 1.2 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_37 PF13744.6 BAJ50640.1 - 0.029 14.3 0.0 0.062 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain EMG1 PF03587.14 BAJ50641.1 - 4.2e-48 163.6 0.0 4.7e-48 163.4 0.0 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase Rpr2 PF04032.16 BAJ50642.1 - 2.6e-10 40.5 0.2 3.2e-10 40.1 0.2 1.2 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain DZR PF12773.7 BAJ50642.1 - 0.00094 19.2 0.2 0.0015 18.5 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 BAJ50642.1 - 0.009 16.0 0.3 0.02 14.9 0.3 1.6 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 BAJ50642.1 - 0.026 14.3 5.7 0.22 11.3 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain GFA PF04828.14 BAJ50642.1 - 0.039 14.3 1.6 0.18 12.2 0.0 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_4 PF13717.6 BAJ50642.1 - 0.04 13.9 8.8 0.044 13.7 1.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain RNHCP PF12647.7 BAJ50642.1 - 0.044 13.7 2.4 0.21 11.6 2.3 1.9 1 1 1 2 2 2 0 RNHCP domain DNA_RNApol_7kD PF03604.13 BAJ50642.1 - 0.068 12.9 0.9 0.068 12.9 0.9 2.5 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_13 PF09855.9 BAJ50642.1 - 0.12 12.5 2.8 1.2 9.4 2.8 2.2 1 1 0 1 1 1 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-ribbon_3 PF13248.6 BAJ50642.1 - 0.2 11.1 2.4 4.3 6.9 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.9 BAJ50642.1 - 0.3 11.2 3.2 3.6 7.8 0.4 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf_C2H2_13 PF18508.1 BAJ50642.1 - 0.38 10.4 1.5 3.3 7.4 0.2 2.2 2 0 0 2 2 2 0 Zinc finger domain TFIIS_C PF01096.18 BAJ50642.1 - 0.81 9.6 5.2 1.6 8.7 0.2 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) DUF35_N PF12172.8 BAJ50642.1 - 1.3 9.0 7.6 5.8 6.9 1.0 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Nudix_N_2 PF14803.6 BAJ50642.1 - 1.4 8.9 10.2 5.5 7.0 6.8 2.8 2 1 1 3 3 3 0 Nudix N-terminal PknG_rubred PF16919.5 BAJ50642.1 - 2.3 8.4 6.4 2.9 8.0 5.8 1.4 1 1 0 1 1 1 0 Protein kinase G rubredoxin domain Zn_Tnp_IS1595 PF12760.7 BAJ50642.1 - 7 6.7 9.4 1.5 8.9 1.6 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Ribosomal_S19e PF01090.19 BAJ50643.1 - 3e-51 172.7 0.0 3.7e-51 172.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 BAJ50643.1 - 0.0055 16.6 0.0 0.014 15.3 0.0 1.6 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain HTH_45 PF14947.6 BAJ50643.1 - 0.14 12.2 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix Pribosyltran PF00156.27 BAJ50644.1 - 2.9e-29 101.6 0.6 4.2e-29 101.1 0.6 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 BAJ50644.1 - 0.0054 16.2 0.1 0.0079 15.7 0.1 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 BAJ50644.1 - 0.017 14.6 0.0 0.11 12.0 0.0 2.3 3 0 0 3 3 3 0 Phosphoribosyl transferase Spermine_synth PF01564.17 BAJ50645.1 - 1.9e-13 50.2 0.0 3.1e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Methyltransf_30 PF05430.11 BAJ50645.1 - 0.00024 21.0 0.0 0.00044 20.1 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_25 PF13649.6 BAJ50645.1 - 0.0031 18.2 0.0 0.0064 17.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAJ50645.1 - 0.048 14.4 0.0 0.092 13.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_2 PF00891.18 BAJ50645.1 - 0.066 12.5 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 O-methyltransferase domain Methyltransf_5 PF01795.19 BAJ50645.1 - 0.2 11.1 0.0 0.31 10.5 0.0 1.1 1 0 0 1 1 1 0 MraW methylase family Zn-ribbon_8 PF09723.10 BAJ50646.1 - 3e-05 24.1 0.8 4.1e-05 23.6 0.8 1.3 1 0 0 1 1 1 1 Zinc ribbon domain Zn_ribbon_SprT PF17283.2 BAJ50646.1 - 0.00013 21.8 1.0 0.00017 21.4 1.0 1.2 1 0 0 1 1 1 1 SprT-like zinc ribbon domain TF_Zn_Ribbon PF08271.12 BAJ50646.1 - 0.0049 16.4 2.4 0.13 11.8 0.1 2.2 1 1 1 2 2 2 2 TFIIB zinc-binding TackOD1 PF18551.1 BAJ50646.1 - 0.0079 15.9 0.1 0.0097 15.6 0.1 1.1 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 zf-C2H2 PF00096.26 BAJ50646.1 - 0.0097 16.3 3.0 0.28 11.7 0.2 2.3 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2HC5 PF06221.13 BAJ50646.1 - 0.022 14.7 0.1 0.028 14.4 0.1 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type HypA PF01155.19 BAJ50646.1 - 0.033 14.2 0.2 0.036 14.1 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C2H2_4 PF13894.6 BAJ50646.1 - 0.035 14.9 2.3 1.7 9.7 0.2 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2HC_2 PF13913.6 BAJ50646.1 - 0.43 10.6 0.2 0.43 10.6 0.2 2.1 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-H2C2_2 PF13465.6 BAJ50646.1 - 3.8 8.1 5.6 3.1 8.4 0.2 2.2 1 1 1 2 2 2 0 Zinc-finger double domain HTH_17 PF12728.7 BAJ50647.1 - 1.2e-13 51.1 2.2 4.8e-13 49.1 0.4 2.6 3 0 0 3 3 2 1 Helix-turn-helix domain MerR_1 PF13411.6 BAJ50647.1 - 1.7e-06 28.0 0.2 4.1e-06 26.8 0.2 1.7 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR PF00376.23 BAJ50647.1 - 2.5e-05 23.9 0.2 5.4e-05 22.9 0.2 1.6 1 0 0 1 1 1 1 MerR family regulatory protein HTH_23 PF13384.6 BAJ50647.1 - 0.0016 18.1 0.2 0.0057 16.4 0.2 1.9 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 BAJ50647.1 - 0.0063 16.2 0.0 0.071 12.8 0.0 2.6 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_28 PF13518.6 BAJ50647.1 - 0.011 15.8 0.2 0.041 14.0 0.2 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 BAJ50647.1 - 0.017 14.6 2.7 0.54 9.8 0.1 3.0 3 0 0 3 3 3 0 Sigma-70, region 4 DUF3853 PF12964.7 BAJ50647.1 - 0.023 14.9 0.0 0.064 13.4 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3853) DDRGK PF09756.9 BAJ50647.1 - 0.032 13.8 0.0 0.056 13.0 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain HTH_29 PF13551.6 BAJ50647.1 - 0.059 13.4 0.0 0.16 12.0 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix DUF1323 PF07037.11 BAJ50647.1 - 0.096 13.1 0.0 0.15 12.4 0.0 1.5 1 0 0 1 1 1 0 Putative transcription regulator (DUF1323) MS_channel PF00924.18 BAJ50648.1 - 3.8e-12 46.2 0.1 5e-12 45.8 0.1 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel Nucleoporin2 PF04096.14 BAJ50649.1 - 0.18 11.9 2.9 0.32 11.1 1.4 2.1 2 1 0 2 2 2 0 Nucleoporin autopeptidase Biotin_lipoyl PF00364.22 BAJ50650.1 - 2.7e-20 72.0 4.5 3.3e-20 71.7 4.5 1.1 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 BAJ50650.1 - 9.3e-10 38.2 1.8 4e-05 23.3 0.2 2.1 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 BAJ50650.1 - 3.2e-06 27.8 2.0 0.0088 16.7 0.2 2.1 1 1 1 2 2 2 2 HlyD family secretion protein GCV_H PF01597.19 BAJ50650.1 - 4.1e-05 23.5 6.5 6e-05 22.9 2.4 2.0 1 1 1 2 2 2 1 Glycine cleavage H-protein RnfC_N PF13375.6 BAJ50650.1 - 0.0002 21.3 2.5 0.0034 17.3 0.7 2.0 1 1 1 2 2 2 2 RnfC Barrel sandwich hybrid domain PYNP_C PF07831.13 BAJ50650.1 - 0.00039 20.0 1.3 0.16 11.6 0.1 2.2 1 1 1 2 2 2 2 Pyrimidine nucleoside phosphorylase C-terminal domain HlyD_D23 PF16576.5 BAJ50650.1 - 0.00059 19.1 2.2 0.0049 16.1 0.8 2.0 1 1 1 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion DUF2118 PF09891.9 BAJ50650.1 - 0.0054 16.7 2.3 0.015 15.3 1.0 1.9 1 1 1 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2118) Peptidase_M23 PF01551.22 BAJ50650.1 - 0.022 15.0 0.9 1 9.6 0.9 2.1 1 1 0 1 1 1 0 Peptidase family M23 ATP-synt_ab_Xtn PF16886.5 BAJ50650.1 - 0.03 14.2 2.2 0.035 14.0 2.2 1.1 1 0 0 1 1 1 0 ATPsynthase alpha/beta subunit N-term extension Transket_pyr PF02779.24 BAJ50651.1 - 2.9e-44 150.9 0.0 4e-44 150.4 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 BAJ50651.1 - 7.3e-39 132.5 1.9 1.1e-38 131.8 0.7 1.9 3 0 0 3 3 3 1 Transketolase, C-terminal domain PFOR_II PF17147.4 BAJ50651.1 - 8.7e-06 26.0 0.2 1.9e-05 24.9 0.2 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Thiamine_BP PF01910.17 BAJ50651.1 - 0.0099 15.8 0.8 0.025 14.5 0.8 1.6 1 0 0 1 1 1 1 Thiamine-binding protein DUF3343 PF11823.8 BAJ50651.1 - 0.013 14.9 0.1 0.093 12.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) E1_dh PF00676.20 BAJ50652.1 - 1.1e-77 261.0 0.0 1.2e-77 260.8 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 BAJ50652.1 - 3e-07 30.3 0.1 2.2e-06 27.6 0.1 2.2 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Transketolase_N PF00456.21 BAJ50652.1 - 0.00071 18.6 0.0 0.0012 17.9 0.0 1.3 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 BAJ50652.1 - 0.00087 18.6 0.0 0.0022 17.3 0.0 1.7 1 1 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Epimerase PF01370.21 BAJ50653.1 - 3.8e-52 177.2 0.0 4.5e-52 176.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 BAJ50653.1 - 1.3e-45 156.3 0.0 3.3e-45 154.9 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 BAJ50653.1 - 5.3e-28 97.8 0.0 6.5e-28 97.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 BAJ50653.1 - 1.5e-25 90.0 0.1 5.1e-25 88.2 0.1 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 BAJ50653.1 - 1.8e-24 86.4 0.0 2.5e-24 85.9 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 BAJ50653.1 - 1.6e-17 63.5 0.5 4e-12 45.9 0.0 3.1 3 1 0 3 3 3 2 Male sterility protein NAD_binding_10 PF13460.6 BAJ50653.1 - 2.2e-10 40.7 0.0 1.8e-09 37.7 0.0 2.3 2 1 0 2 2 2 1 NAD(P)H-binding adh_short PF00106.25 BAJ50653.1 - 4.8e-08 32.7 0.2 1.5e-07 31.0 0.2 1.8 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 BAJ50653.1 - 0.00079 19.0 0.1 0.027 14.1 0.1 2.3 2 1 0 2 2 2 1 NmrA-like family KR PF08659.10 BAJ50653.1 - 0.0011 19.0 1.1 0.69 9.8 0.1 2.7 3 0 0 3 3 3 2 KR domain Glycos_transf_1 PF00534.20 BAJ50654.1 - 1.3e-37 128.9 0.2 2.2e-37 128.2 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 BAJ50654.1 - 2e-34 118.9 2.7 2.9e-34 118.4 0.4 2.2 3 0 0 3 3 3 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 BAJ50654.1 - 5.8e-16 58.9 5.4 3.8e-15 56.3 4.6 2.6 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 BAJ50654.1 - 2.5e-15 56.6 0.1 1e-14 54.7 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 BAJ50654.1 - 8.3e-13 49.1 10.0 2.7e-09 37.7 2.6 3.1 2 1 1 3 3 3 2 Glycosyl transferase 4-like domain Glyco_transf_20 PF00982.21 BAJ50654.1 - 0.00061 18.6 0.0 0.001 17.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 20 Glyco_transf_5 PF08323.11 BAJ50654.1 - 0.0024 17.6 1.8 0.58 9.8 0.5 2.4 1 1 0 2 2 2 2 Starch synthase catalytic domain PhdYeFM_antitox PF02604.19 BAJ50654.1 - 0.012 15.4 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Glyco_trans_4_2 PF13477.6 BAJ50654.1 - 0.018 15.1 0.1 0.65 10.0 0.1 2.7 1 1 0 1 1 1 0 Glycosyl transferase 4-like Glyco_transf_90 PF05686.12 BAJ50654.1 - 0.19 10.6 0.0 0.29 10.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 90 Ribosomal_S17e PF00833.18 BAJ50655.1 - 2e-05 24.5 0.1 2.1e-05 24.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal S17 RIFIN PF02009.16 BAJ50656.1 - 2 8.3 9.2 0.19 11.6 0.2 2.1 2 0 0 2 2 2 0 Rifin XPG_I PF00867.18 BAJ50657.1 - 4.6e-27 94.2 0.0 8.2e-27 93.4 0.0 1.4 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 BAJ50657.1 - 5.5e-17 62.1 0.0 9.5e-17 61.3 0.0 1.4 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 BAJ50657.1 - 1.4e-06 28.8 0.0 3.2e-06 27.6 0.0 1.7 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 BAJ50657.1 - 0.0043 17.6 0.0 0.012 16.2 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 BAJ50657.1 - 0.032 14.3 0.1 0.26 11.4 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix motif HemY_N PF07219.13 BAJ50657.1 - 0.29 11.3 2.8 0.64 10.2 2.8 1.5 1 0 0 1 1 1 0 HemY protein N-terminus AAA PF00004.29 BAJ50658.1 - 8.3e-100 330.4 0.0 1.3e-49 168.0 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAJ50658.1 - 2.6e-36 123.2 3.2 2e-18 65.9 1.2 2.9 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 BAJ50658.1 - 1.5e-28 98.8 1.0 6.3e-28 96.8 1.0 2.2 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_16 PF13191.6 BAJ50658.1 - 1.5e-16 61.2 0.1 7.3e-07 29.7 0.0 3.2 2 2 0 2 2 2 2 AAA ATPase domain RuvB_N PF05496.12 BAJ50658.1 - 2.4e-16 59.9 0.0 1.2e-07 31.6 0.0 3.1 2 2 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 BAJ50658.1 - 3.4e-16 59.8 0.0 2.2e-08 34.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_14 PF13173.6 BAJ50658.1 - 8.2e-13 48.5 0.0 7e-06 26.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 BAJ50658.1 - 1.8e-12 47.5 0.2 0.00019 21.5 0.1 3.9 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) TIP49 PF06068.13 BAJ50658.1 - 9.8e-12 44.7 0.0 5e-05 22.7 0.0 2.6 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_22 PF13401.6 BAJ50658.1 - 1.2e-10 41.8 0.4 0.015 15.6 0.0 4.1 2 2 2 4 4 4 2 AAA domain AAA_33 PF13671.6 BAJ50658.1 - 1.1e-09 38.5 0.0 0.00069 19.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 BAJ50658.1 - 8.3e-09 35.8 0.0 0.0081 16.5 0.0 2.8 2 0 0 2 2 2 2 RNA helicase ABC_tran PF00005.27 BAJ50658.1 - 1.3e-07 32.2 0.0 0.0095 16.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter IstB_IS21 PF01695.17 BAJ50658.1 - 2e-07 30.9 0.0 0.015 15.0 0.0 2.9 3 0 0 3 3 3 2 IstB-like ATP binding protein Mg_chelatase PF01078.21 BAJ50658.1 - 3e-07 30.0 0.2 0.03 13.7 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI ATPase_2 PF01637.18 BAJ50658.1 - 5.4e-07 29.8 0.3 0.045 13.6 0.0 3.3 2 2 1 3 3 3 2 ATPase domain predominantly from Archaea AAA_28 PF13521.6 BAJ50658.1 - 5.6e-07 30.0 0.0 0.03 14.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain Zeta_toxin PF06414.12 BAJ50658.1 - 1.2e-06 28.0 0.0 0.033 13.5 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_18 PF13238.6 BAJ50658.1 - 2.1e-06 28.3 0.0 0.1 13.2 0.0 3.0 3 0 0 3 3 2 2 AAA domain Vps4_C PF09336.10 BAJ50658.1 - 2.5e-06 27.4 0.1 0.0058 16.6 0.1 3.0 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain TsaE PF02367.17 BAJ50658.1 - 3e-06 27.2 0.0 0.12 12.3 0.0 3.1 2 1 1 3 3 3 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 BAJ50658.1 - 3.6e-06 27.0 0.1 0.15 12.0 0.0 3.1 4 0 0 4 4 2 2 NACHT domain Rad17 PF03215.15 BAJ50658.1 - 3.8e-06 27.0 0.6 0.33 10.9 0.0 3.4 2 1 1 3 3 3 1 Rad17 P-loop domain CDC48_2 PF02933.17 BAJ50658.1 - 8.4e-06 25.5 0.5 2.5e-05 24.0 0.5 1.8 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 ATPase PF06745.13 BAJ50658.1 - 9.3e-06 25.2 0.1 0.22 10.9 0.0 3.2 2 1 0 3 3 3 2 KaiC AAA_24 PF13479.6 BAJ50658.1 - 9.5e-06 25.5 0.0 0.095 12.4 0.0 2.6 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 BAJ50658.1 - 1.2e-05 25.0 0.0 0.4 10.4 0.0 3.4 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_25 PF13481.6 BAJ50658.1 - 1.6e-05 24.5 5.7 0.51 9.9 0.5 4.4 4 1 0 4 4 4 2 AAA domain AAA_17 PF13207.6 BAJ50658.1 - 2e-05 25.0 0.0 0.22 12.0 0.0 3.2 3 0 0 3 3 3 2 AAA domain DUF815 PF05673.13 BAJ50658.1 - 2e-05 23.9 0.0 0.11 11.6 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_7 PF12775.7 BAJ50658.1 - 7.5e-05 22.3 0.0 0.47 9.9 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region Viral_helicase1 PF01443.18 BAJ50658.1 - 7.7e-05 22.5 0.0 0.049 13.4 0.0 2.3 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase DAP3 PF10236.9 BAJ50658.1 - 9.2e-05 21.8 0.0 0.21 10.7 0.0 2.7 2 1 1 3 3 3 2 Mitochondrial ribosomal death-associated protein 3 NB-ARC PF00931.22 BAJ50658.1 - 0.00012 21.4 0.0 0.56 9.3 0.0 2.5 2 0 0 2 2 2 2 NB-ARC domain Bac_DnaA PF00308.18 BAJ50658.1 - 0.00014 21.7 0.0 0.14 12.0 0.0 2.6 2 0 0 2 2 2 1 Bacterial dnaA protein PhoH PF02562.16 BAJ50658.1 - 0.00028 20.4 0.2 0.75 9.2 0.0 2.5 2 0 0 2 2 2 2 PhoH-like protein AAA_3 PF07726.11 BAJ50658.1 - 0.00035 20.4 0.0 1.2 9.0 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 BAJ50658.1 - 0.0012 18.2 0.0 0.14 11.4 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) Parvo_NS1 PF01057.17 BAJ50658.1 - 0.0012 18.0 0.0 1.3 8.1 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 UFD1 PF03152.14 BAJ50658.1 - 0.0015 18.0 0.0 0.0029 17.1 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 Sigma54_activ_2 PF14532.6 BAJ50658.1 - 0.0017 18.5 0.0 2.2 8.4 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain TniB PF05621.11 BAJ50658.1 - 0.012 15.1 0.0 5.9 6.3 0.0 3.1 3 0 0 3 3 3 0 Bacterial TniB protein NTPase_1 PF03266.15 BAJ50658.1 - 0.014 15.3 2.3 17 5.3 0.0 4.1 3 2 1 4 4 4 0 NTPase SKI PF01202.22 BAJ50658.1 - 0.016 15.4 0.0 5.9 7.0 0.0 2.5 2 0 0 2 2 2 0 Shikimate kinase AAA_19 PF13245.6 BAJ50658.1 - 0.026 14.8 1.4 15 5.9 0.1 3.2 2 1 0 3 3 3 0 AAA domain PduV-EutP PF10662.9 BAJ50658.1 - 0.032 14.0 0.0 9.9 5.9 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_30 PF13604.6 BAJ50658.1 - 0.038 13.7 0.0 13 5.5 0.0 2.6 2 0 0 2 2 2 0 AAA domain SRPRB PF09439.10 BAJ50658.1 - 0.038 13.4 0.0 8.7 5.7 0.0 2.4 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit AFG1_ATPase PF03969.16 BAJ50658.1 - 0.04 12.8 0.0 7.5 5.3 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase AAA_11 PF13086.6 BAJ50658.1 - 0.063 13.1 0.0 14 5.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 BAJ50658.1 - 0.13 12.0 0.0 26 4.6 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain HTH_20 PF12840.7 BAJ50659.1 - 5e-09 36.1 0.0 8.4e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 BAJ50659.1 - 2.8e-05 23.9 0.1 4.5e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 BAJ50659.1 - 0.0064 16.3 0.1 0.0096 15.8 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB NCD1 PF04904.13 BAJ50659.1 - 0.018 15.0 0.1 0.051 13.6 0.0 1.8 1 1 1 2 2 2 0 NAB conserved region 1 (NCD1) PAX PF00292.18 BAJ50659.1 - 0.023 14.6 0.0 0.027 14.4 0.0 1.1 1 0 0 1 1 1 0 'Paired box' domain HTH_IclR PF09339.10 BAJ50659.1 - 0.037 13.8 1.2 0.056 13.3 0.5 1.5 2 0 0 2 2 2 0 IclR helix-turn-helix domain Rrf2 PF02082.20 BAJ50659.1 - 0.096 13.0 0.1 0.15 12.4 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator ECF_trnsprt PF12822.7 BAJ50660.1 - 1e-07 32.2 15.6 1.3e-07 31.8 15.6 1.1 1 0 0 1 1 1 1 ECF transporter, substrate-specific component Rad51 PF08423.11 BAJ50661.1 - 6.3e-91 304.2 0.0 7.6e-91 303.9 0.0 1.0 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 BAJ50661.1 - 1.9e-12 47.2 0.0 2.9e-12 46.6 0.0 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein HHH_5 PF14520.6 BAJ50661.1 - 4.7e-10 39.9 0.6 1.4e-09 38.4 0.6 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain ATPase PF06745.13 BAJ50661.1 - 1.1e-09 38.0 0.0 2e-09 37.2 0.0 1.5 1 1 0 1 1 1 1 KaiC AAA_22 PF13401.6 BAJ50661.1 - 0.00045 20.5 0.1 0.00099 19.4 0.1 1.5 1 1 0 1 1 1 1 AAA domain Cdd1 PF11731.8 BAJ50661.1 - 0.00083 19.6 0.0 0.0017 18.6 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus ABC_tran PF00005.27 BAJ50661.1 - 0.0022 18.5 0.0 0.0034 17.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF4332 PF14229.6 BAJ50661.1 - 0.0075 16.5 0.1 0.033 14.4 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4332) DNA_pol_lambd_f PF10391.9 BAJ50661.1 - 0.1 12.4 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda AAA PF00004.29 BAJ50661.1 - 0.13 12.7 0.1 0.43 11.0 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IMS_HHH PF11798.8 BAJ50661.1 - 0.14 12.5 0.0 0.43 11.0 0.0 1.8 1 0 0 1 1 1 0 IMS family HHH motif INCENP_ARK-bind PF03941.15 BAJ50661.1 - 0.24 11.3 0.6 0.59 10.1 0.1 1.8 2 0 0 2 2 2 0 Inner centromere protein, ARK binding region PK PF00224.21 BAJ50662.1 - 2.4e-80 270.0 0.0 3e-80 269.7 0.0 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 BAJ50662.1 - 2.1e-17 63.4 0.0 6.5e-17 61.8 0.0 1.8 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 BAJ50662.1 - 2e-05 23.8 0.2 5.3e-05 22.4 0.1 1.6 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family 3HCDH_N PF02737.18 BAJ50663.1 - 2.3e-46 157.9 0.0 3.5e-46 157.3 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 BAJ50663.1 - 4.2e-23 81.8 0.1 1.6e-22 79.9 0.1 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 3HCDH_RFF PF18321.1 BAJ50663.1 - 0.00011 22.5 0.0 0.00025 21.4 0.0 1.6 1 0 0 1 1 1 1 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NAD_binding_2 PF03446.15 BAJ50663.1 - 0.0059 16.8 0.0 0.031 14.4 0.0 2.1 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 BAJ50663.1 - 0.032 14.8 0.0 0.082 13.5 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 BAJ50663.1 - 0.082 12.3 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TetR_C_33 PF13305.6 BAJ50663.1 - 0.16 12.8 2.2 0.29 11.9 0.4 2.4 2 2 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Bac_luciferase PF00296.20 BAJ50664.1 - 2.2e-14 53.6 0.3 4.4e-13 49.3 0.3 2.0 1 1 0 1 1 1 1 Luciferase-like monooxygenase Phage_stabilise PF11134.8 BAJ50664.1 - 0.095 11.5 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 Phage stabilisation protein ABC2_membrane_3 PF12698.7 BAJ50665.1 - 2.8e-29 102.3 22.1 4.4e-29 101.7 22.1 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 BAJ50665.1 - 6.3e-29 100.9 22.5 5e-25 88.2 19.1 2.3 2 0 0 2 2 2 2 ABC-2 type transporter ABC_tran PF00005.27 BAJ50666.1 - 4.1e-32 111.6 0.0 6e-32 111.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50666.1 - 1.1e-14 54.9 0.0 1e-08 35.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 BAJ50666.1 - 1.4e-05 25.0 0.0 0.11 12.2 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 BAJ50666.1 - 3.9e-05 23.2 0.0 0.008 15.6 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain DUF4162 PF13732.6 BAJ50666.1 - 0.0023 18.6 0.1 0.0075 17.0 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_24 PF13479.6 BAJ50666.1 - 0.018 14.8 0.6 2.8 7.6 0.1 2.8 2 2 1 3 3 3 0 AAA domain AAA_23 PF13476.6 BAJ50666.1 - 0.024 15.1 0.5 0.039 14.5 0.5 1.5 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 BAJ50666.1 - 0.043 14.4 0.4 0.48 11.0 0.4 2.3 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAJ50666.1 - 0.066 13.0 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SbcCD_C PF13558.6 BAJ50666.1 - 0.088 13.1 0.0 0.98 9.7 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit YcaO_C PF18381.1 BAJ50666.1 - 0.089 12.7 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 YcaO cyclodehydratase C-terminal domain AAA_13 PF13166.6 BAJ50666.1 - 0.091 11.4 0.0 0.37 9.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain HEPN PF05168.14 BAJ50667.1 - 1.3e-34 118.9 0.0 1.5e-34 118.6 0.0 1.0 1 0 0 1 1 1 1 HEPN domain PaREP1 PF05942.11 BAJ50667.1 - 0.00011 22.2 0.9 0.00051 19.9 0.9 2.1 1 1 0 1 1 1 1 Archaeal PaREP1/PaREP8 family NTP_transf_2 PF01909.23 BAJ50668.1 - 2.4e-08 34.1 0.0 2.5e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ50668.1 - 0.0024 17.9 0.1 0.0029 17.7 0.1 1.3 1 1 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase Aconitase_C PF00694.19 BAJ50669.1 - 2.5e-31 108.7 0.0 3.4e-31 108.3 0.0 1.2 1 0 0 1 1 1 1 Aconitase C-terminal domain Methyltransf_25 PF13649.6 BAJ50670.1 - 3.2e-10 40.6 0.0 4.1e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 BAJ50670.1 - 1.1e-08 34.7 0.0 1.4e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.6 BAJ50670.1 - 2.6e-08 33.8 0.0 2.9e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 BAJ50670.1 - 2.8e-07 31.1 0.0 3.9e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAJ50670.1 - 1.8e-05 24.7 0.0 2e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 BAJ50670.1 - 1.8e-05 24.3 0.0 2.3e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.20 BAJ50670.1 - 0.00012 21.3 0.0 0.00015 21.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MetW PF07021.12 BAJ50670.1 - 0.00034 20.3 0.0 0.00045 19.9 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW N6_N4_Mtase PF01555.18 BAJ50670.1 - 0.001 18.8 0.0 0.0014 18.4 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Methyltransf_12 PF08242.12 BAJ50670.1 - 0.0011 19.6 0.0 0.0014 19.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 BAJ50670.1 - 0.0024 17.2 0.0 0.0029 17.0 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Met_10 PF02475.16 BAJ50670.1 - 0.0024 17.7 0.0 0.0028 17.4 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein MTS PF05175.14 BAJ50670.1 - 0.0031 17.1 0.0 0.004 16.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain DOT1 PF08123.13 BAJ50670.1 - 0.0036 16.9 0.0 0.0056 16.2 0.0 1.3 1 0 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_32 PF13679.6 BAJ50670.1 - 0.0051 16.8 0.0 0.0054 16.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 BAJ50670.1 - 0.021 14.3 0.0 0.025 14.0 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase UPF0020 PF01170.18 BAJ50670.1 - 0.024 14.3 0.1 0.31 10.7 0.1 2.1 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_18 PF12847.7 BAJ50670.1 - 0.056 13.4 0.0 0.074 13.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain FmrO PF07091.11 BAJ50670.1 - 0.093 12.3 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) PCMT PF01135.19 BAJ50670.1 - 0.11 12.2 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_9 PF08003.11 BAJ50670.1 - 0.12 11.3 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) TehB PF03848.14 BAJ50670.1 - 0.14 11.5 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Cons_hypoth95 PF03602.15 BAJ50670.1 - 0.16 11.6 0.1 0.28 10.8 0.0 1.4 2 0 0 2 2 1 0 Conserved hypothetical protein 95 IlvN PF07991.12 BAJ50671.1 - 2e-69 232.4 0.0 3.6e-69 231.6 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 BAJ50671.1 - 6.5e-55 185.4 0.1 8.7e-55 185.0 0.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_binding_2 PF03446.15 BAJ50671.1 - 0.00039 20.6 0.0 0.0023 18.1 0.0 2.1 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 BAJ50671.1 - 0.00057 20.4 0.0 0.0013 19.2 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 BAJ50671.1 - 0.00072 19.0 0.0 0.0013 18.1 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 BAJ50671.1 - 0.0022 18.1 0.0 0.0079 16.3 0.0 1.8 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TPP_enzyme_N PF02776.18 BAJ50673.1 - 4.2e-57 192.5 0.2 8.8e-55 184.9 0.1 2.4 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 BAJ50673.1 - 1.2e-45 154.6 0.4 2.6e-45 153.5 0.2 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 BAJ50673.1 - 1.9e-45 154.3 0.2 2.6e-44 150.7 0.0 2.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HMGL-like PF00682.19 BAJ50674.1 - 1.2e-83 280.7 1.5 1.2e-83 280.7 1.5 1.5 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 BAJ50674.1 - 6.4e-12 45.5 0.4 1.3e-11 44.6 0.4 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain Topo-VIb_trans PF09239.11 BAJ50675.1 - 2.2e-59 199.8 0.0 3.5e-59 199.2 0.0 1.3 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c_3 PF13589.6 BAJ50675.1 - 1.1e-06 28.5 0.0 4.2e-06 26.6 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 BAJ50675.1 - 1.6e-06 28.6 0.0 3.1e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FbpA PF05833.11 BAJ50675.1 - 6.9e-06 25.1 0.0 1.1e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) Ribosomal_S13 PF00416.22 BAJ50675.1 - 0.14 12.6 0.0 0.28 11.6 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S13/S18 ATPase_2 PF01637.18 BAJ50676.1 - 1.4e-11 44.8 0.0 1.6e-10 41.3 0.0 2.2 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 BAJ50676.1 - 1.8e-08 34.5 0.0 1e-07 32.1 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ50676.1 - 4.5e-05 23.9 0.7 0.00028 21.3 0.4 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 BAJ50676.1 - 0.0004 20.7 0.2 0.0015 18.8 0.0 2.1 3 1 0 3 3 3 1 AAA domain GIIM PF08388.11 BAJ50676.1 - 0.065 13.3 0.5 0.4 10.8 0.2 2.4 2 1 0 2 2 2 0 Group II intron, maturase-specific domain 6PGD PF00393.19 BAJ50677.1 - 1.8e-105 352.5 0.0 2.2e-105 352.2 0.0 1.1 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 BAJ50677.1 - 3.8e-49 166.9 0.1 8.1e-49 165.8 0.1 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 BAJ50677.1 - 9.9e-08 32.1 0.3 4.3e-07 30.1 0.1 2.1 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 BAJ50677.1 - 9.2e-07 29.4 0.0 2.9e-06 27.8 0.0 1.9 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 BAJ50677.1 - 2.6e-06 27.4 0.8 1.1e-05 25.4 0.0 2.4 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 BAJ50677.1 - 0.00013 21.7 0.0 0.00023 20.8 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 BAJ50677.1 - 0.00096 19.4 0.0 0.0031 17.8 0.0 1.9 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 BAJ50677.1 - 0.0015 17.9 0.0 0.0033 16.8 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 BAJ50677.1 - 0.0048 16.2 0.1 0.0094 15.3 0.1 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_Gly3P_dh_N PF01210.23 BAJ50677.1 - 0.0073 16.3 0.0 0.037 14.0 0.0 2.1 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Mannitol_dh PF01232.23 BAJ50677.1 - 0.065 13.4 0.0 0.24 11.5 0.0 1.9 2 0 0 2 2 2 0 Mannitol dehydrogenase Rossmann domain Epimerase PF01370.21 BAJ50677.1 - 0.14 11.6 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family HTH_5 PF01022.20 BAJ50678.1 - 7.9e-16 57.7 0.2 1.2e-15 57.1 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 BAJ50678.1 - 1.1e-10 41.4 0.0 2e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 BAJ50678.1 - 5.4e-05 23.0 0.0 0.0001 22.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 BAJ50678.1 - 5.5e-05 23.6 0.0 8.1e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 BAJ50678.1 - 7.2e-05 22.5 0.1 0.00011 22.0 0.1 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 BAJ50678.1 - 0.00011 22.0 0.0 0.00018 21.3 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PaaX PF07848.12 BAJ50678.1 - 0.00014 22.0 0.0 0.00024 21.3 0.0 1.4 1 0 0 1 1 1 1 PaaX-like protein HTH_24 PF13412.6 BAJ50678.1 - 0.00015 21.2 0.1 0.00037 20.0 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 BAJ50678.1 - 0.0018 18.6 0.2 0.0028 18.0 0.2 1.4 1 1 0 1 1 1 1 Transcriptional regulator HxlR PF01638.17 BAJ50678.1 - 0.0027 17.5 0.1 0.0037 17.1 0.1 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_40 PF14493.6 BAJ50678.1 - 0.0062 17.0 0.1 0.0087 16.5 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DUF223 PF02721.14 BAJ50678.1 - 0.011 16.0 0.0 0.017 15.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF223 DUF4423 PF14394.6 BAJ50678.1 - 0.012 15.3 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Fe_dep_repress PF01325.19 BAJ50678.1 - 0.013 15.7 0.1 0.02 15.0 0.1 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 BAJ50678.1 - 0.021 14.8 0.1 0.033 14.1 0.1 1.3 1 0 0 1 1 1 0 HTH domain HTH_29 PF13551.6 BAJ50678.1 - 0.022 14.8 0.1 0.038 14.0 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Penicillinase_R PF03965.16 BAJ50678.1 - 0.035 14.4 0.1 0.059 13.7 0.1 1.5 1 1 0 1 1 1 0 Penicillinase repressor GerE PF00196.19 BAJ50678.1 - 0.045 13.3 0.1 0.092 12.3 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_45 PF14947.6 BAJ50678.1 - 0.048 13.7 0.0 0.075 13.0 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix MarR PF01047.22 BAJ50678.1 - 0.048 13.6 0.1 0.083 12.8 0.1 1.3 1 0 0 1 1 1 0 MarR family TFIIE_alpha PF02002.17 BAJ50678.1 - 0.12 12.3 0.0 0.17 11.8 0.0 1.4 1 1 0 1 1 1 0 TFIIE alpha subunit Mnd1 PF03962.15 BAJ50678.1 - 0.17 12.2 0.0 4.8 7.5 0.0 2.4 2 0 0 2 2 2 0 Mnd1 HTH domain Pyr_redox_2 PF07992.14 BAJ50679.1 - 2.4e-20 72.9 0.0 4e-19 68.9 0.0 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 BAJ50679.1 - 0.0083 16.1 0.1 4.6 7.2 0.0 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding Pyr_redox PF00070.27 BAJ50679.1 - 0.011 16.3 0.0 9.8 6.8 0.0 3.3 3 1 1 4 4 4 0 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 BAJ50679.1 - 0.17 10.7 0.0 0.95 8.2 0.1 2.0 2 0 0 2 2 2 0 Tryptophan halogenase TusA PF01206.17 BAJ50680.1 - 1.9e-19 69.2 0.0 2.1e-19 69.1 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DrsE_2 PF13686.6 BAJ50681.1 - 7.2e-49 165.6 1.1 8e-49 165.5 1.1 1.0 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.15 BAJ50681.1 - 2e-14 54.0 0.0 6.1e-14 52.4 0.0 1.7 1 1 0 1 1 1 1 DsrE/DsrF-like family Far-17a_AIG1 PF04750.14 BAJ50681.1 - 0.016 14.6 0.0 0.018 14.4 0.0 1.2 1 0 0 1 1 1 0 FAR-17a/AIG1-like protein SfsA PF03749.13 BAJ50681.1 - 0.08 12.8 0.1 0.15 11.9 0.0 1.5 2 0 0 2 2 2 0 Sugar fermentation stimulation protein RE domain Glyco_transf_4 PF13439.6 BAJ50681.1 - 0.23 11.4 0.0 0.35 10.9 0.0 1.3 1 1 0 1 1 1 0 Glycosyltransferase Family 4 Topoisom_I PF01028.20 BAJ50682.1 - 3.4e-69 232.6 3.3 5.3e-69 232.0 3.3 1.3 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core Topoisom_I_N PF02919.15 BAJ50682.1 - 1.2e-68 230.8 0.5 1.2e-68 230.8 0.5 2.8 2 1 0 2 2 2 1 Eukaryotic DNA topoisomerase I, DNA binding fragment Topo_C_assoc PF14370.6 BAJ50682.1 - 7.1e-17 61.1 0.4 7.1e-17 61.1 0.4 2.9 3 0 0 3 3 3 1 C-terminal topoisomerase domain DCB PF16213.5 BAJ50682.1 - 0.025 14.2 1.4 2.7 7.6 0.0 2.4 2 0 0 2 2 2 0 Dimerisation and cyclophilin-binding domain of Mon2 Armet PF10208.9 BAJ50682.1 - 0.033 14.1 0.3 0.077 12.9 0.3 1.6 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding DUF2631 PF10939.8 BAJ50682.1 - 0.087 12.7 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) PIN_5 PF08745.11 BAJ50682.1 - 0.23 10.8 0.0 0.23 10.8 0.0 3.3 3 1 1 4 4 4 0 PINc domain ribonuclease NES_C_h PF18208.1 BAJ50682.1 - 1.1 9.5 8.4 3 8.2 3.4 3.2 3 0 0 3 3 3 0 Nicking enzyme C-terminal middle helical domain BST2 PF16716.5 BAJ50682.1 - 1.4 9.5 6.6 0.29 11.7 0.4 2.9 3 0 0 3 3 3 0 Bone marrow stromal antigen 2 Uso1_p115_C PF04871.13 BAJ50682.1 - 5.5 7.4 16.3 0.61 10.5 6.4 2.7 3 0 0 3 3 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region APG6_N PF17675.1 BAJ50682.1 - 8.4 6.9 14.2 9.4 6.8 8.8 2.6 2 0 0 2 2 2 0 Apg6 coiled-coil region Glycohydro_20b2 PF14845.6 BAJ50682.1 - 9 6.9 7.8 59 4.3 4.3 2.9 2 1 0 2 2 2 0 beta-acetyl hexosaminidase like Lsm_C PF14894.6 BAJ50683.1 - 2.1e-23 81.8 0.6 6.1e-23 80.4 0.1 1.8 2 0 0 2 2 2 1 Lsm C-terminal CitMHS PF03600.16 BAJ50684.1 - 4.8e-32 111.3 29.5 4.8e-32 111.3 29.5 1.7 1 1 1 2 2 2 1 Citrate transporter Na_sulph_symp PF00939.19 BAJ50684.1 - 5.6e-09 35.6 19.1 0.0012 18.0 8.6 3.1 1 1 2 3 3 3 3 Sodium:sulfate symporter transmembrane region Met_10 PF02475.16 BAJ50685.1 - 7.3e-60 202.1 0.0 1.1e-59 201.5 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 BAJ50685.1 - 1.6e-14 53.5 0.0 3e-14 52.6 0.0 1.5 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain MTS PF05175.14 BAJ50685.1 - 4.4e-09 36.1 0.0 1.1e-08 34.8 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 BAJ50685.1 - 5e-08 32.8 0.0 7.7e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 BAJ50685.1 - 3.8e-06 26.6 0.0 5.8e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 BAJ50685.1 - 2.3e-05 25.0 0.0 9.4e-05 23.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain TRM PF02005.16 BAJ50685.1 - 0.00024 20.4 0.0 0.00032 20.0 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_31 PF13847.6 BAJ50685.1 - 0.00059 19.7 0.0 0.0021 17.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_4 PF02390.17 BAJ50685.1 - 0.00074 19.0 0.0 0.0016 17.9 0.0 1.5 2 0 0 2 2 2 1 Putative methyltransferase PrmA PF06325.13 BAJ50685.1 - 0.0012 18.3 0.0 0.0017 17.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltr_RsmB-F PF01189.17 BAJ50685.1 - 0.0017 18.0 0.0 0.0029 17.3 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_18 PF12847.7 BAJ50685.1 - 0.0028 17.6 0.0 0.0052 16.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PRMT5 PF05185.16 BAJ50685.1 - 0.0069 16.3 0.0 0.0099 15.7 0.0 1.2 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase N6_Mtase PF02384.16 BAJ50685.1 - 0.055 12.7 0.0 0.079 12.2 0.0 1.1 1 0 0 1 1 1 0 N-6 DNA Methylase DNA_methylase PF00145.17 BAJ50685.1 - 0.086 12.2 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Methyltransf_23 PF13489.6 BAJ50685.1 - 0.12 12.2 0.0 0.45 10.3 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Cupredoxin_1 PF13473.6 BAJ50687.1 - 0.012 15.8 0.0 0.021 14.9 0.0 1.6 1 1 0 1 1 1 0 Cupredoxin-like domain Trp_oprn_chp PF09534.10 BAJ50687.1 - 0.014 15.2 0.3 0.018 14.9 0.3 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Pilin_N PF07790.11 BAJ50687.1 - 0.039 14.9 0.9 0.065 14.2 0.8 1.5 1 1 0 1 1 1 0 Archaeal Type IV pilin, N-terminal Cu-oxidase_2 PF07731.14 BAJ50687.1 - 0.053 13.3 0.0 0.33 10.7 0.0 2.1 1 1 0 1 1 1 0 Multicopper oxidase Histidinol_dh PF00815.20 BAJ50688.1 - 2.6e-133 445.0 4.5 3.4e-133 444.6 4.5 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase VapB_antitoxin PF09957.9 BAJ50688.1 - 2.6 8.0 4.5 4.7 7.2 0.0 3.1 4 0 0 4 4 4 0 Bacterial antitoxin of type II TA system, VapB Pur_DNA_glyco PF02245.16 BAJ50689.1 - 9.6e-52 174.9 0.0 1.2e-51 174.6 0.0 1.1 1 0 0 1 1 1 1 Methylpurine-DNA glycosylase (MPG) UDG PF03167.19 BAJ50690.1 - 8.6e-45 152.5 0.0 1e-44 152.2 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily AhpC-TSA PF00578.21 BAJ50691.1 - 7e-35 119.7 0.0 8.5e-35 119.4 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 BAJ50691.1 - 2.2e-19 69.6 0.0 2.6e-19 69.4 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 BAJ50691.1 - 0.0023 17.8 0.0 0.014 15.4 0.0 2.1 1 1 0 1 1 1 1 SCO1/SenC AhpC-TSA_2 PF13911.6 BAJ50691.1 - 0.0056 16.8 0.0 0.0068 16.5 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme Thioredoxin_8 PF13905.6 BAJ50691.1 - 0.064 13.6 0.0 0.091 13.1 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like SCP2 PF02036.17 BAJ50692.1 - 3.4e-13 49.9 0.0 4.2e-13 49.6 0.0 1.2 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 BAJ50692.1 - 2.5e-05 24.5 0.0 3.1e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal SCP2_2 PF13530.6 BAJ50692.1 - 0.014 15.8 0.0 0.021 15.2 0.0 1.3 1 1 0 1 1 1 0 Sterol carrier protein domain CDP-OH_P_transf PF01066.21 BAJ50693.1 - 1.4e-13 51.3 1.9 1.4e-13 51.3 1.9 2.8 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase TrmO PF01980.16 BAJ50694.1 - 1.5e-27 96.2 0.0 1.8e-27 95.9 0.0 1.1 1 0 0 1 1 1 1 tRNA-methyltransferase O Arcadin_1 PF18653.1 BAJ50695.1 - 5.2e-38 129.5 2.0 5.9e-38 129.4 2.0 1.0 1 0 0 1 1 1 1 Arcadin 1 Tudor_2 PF18104.1 BAJ50695.1 - 0.085 12.5 0.1 0.18 11.5 0.1 1.6 1 0 0 1 1 1 0 Jumonji domain-containing protein 2A Tudor domain GCV_H PF01597.19 BAJ50696.1 - 2.3e-41 140.5 0.1 2.7e-41 140.3 0.1 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 BAJ50696.1 - 0.0058 16.4 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 Biotin-requiring enzyme RnfC_N PF13375.6 BAJ50696.1 - 0.013 15.4 0.1 0.019 14.9 0.1 1.4 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain MKT1_N PF12247.8 BAJ50696.1 - 0.13 12.6 0.0 0.26 11.7 0.0 1.5 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication RecR PF02132.15 BAJ50697.1 - 0.0043 16.6 0.4 0.0055 16.2 0.4 1.2 1 0 0 1 1 1 1 RecR protein zinc_ribbon_2 PF13240.6 BAJ50697.1 - 0.02 14.6 2.3 3.1 7.6 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Nop10p PF04135.12 BAJ50697.1 - 0.025 14.6 1.2 0.037 14.1 1.2 1.4 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family CBM_10 PF02013.16 BAJ50697.1 - 0.032 14.7 0.6 0.032 14.7 0.6 1.5 2 0 0 2 2 2 0 Cellulose or protein binding domain DZR PF12773.7 BAJ50697.1 - 0.036 14.1 0.7 0.058 13.4 0.7 1.4 1 1 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.7 BAJ50697.1 - 0.49 10.4 5.4 0.53 10.3 0.3 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.6 BAJ50697.1 - 0.61 9.6 6.3 5.4 6.6 6.4 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zf-RRN7 PF11781.8 BAJ50697.1 - 1.6 8.5 6.7 1.8 8.3 1.1 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Peptidase_M20 PF01546.28 BAJ50698.1 - 1.1e-36 126.5 0.1 3.4e-36 124.9 0.1 1.7 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 BAJ50698.1 - 6.8e-14 51.7 0.0 1.3e-13 50.8 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 BAJ50698.1 - 0.0012 18.6 0.0 0.002 17.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M28 DegT_DnrJ_EryC1 PF01041.17 BAJ50700.1 - 5.8e-111 371.3 0.0 7.2e-111 371.0 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 BAJ50700.1 - 6.6e-06 25.5 0.0 1.7e-05 24.2 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 BAJ50700.1 - 0.0013 17.4 0.0 0.0019 16.8 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 BAJ50700.1 - 0.0035 16.3 0.0 0.013 14.4 0.0 1.7 2 0 0 2 2 2 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 BAJ50700.1 - 0.0098 15.2 0.0 0.016 14.5 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase Glyoxalase_4 PF13669.6 BAJ50700.1 - 0.033 14.5 0.1 0.28 11.5 0.0 2.5 2 2 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PEP_mutase PF13714.6 BAJ50700.1 - 0.06 12.8 0.0 0.14 11.6 0.0 1.6 2 0 0 2 2 2 0 Phosphoenolpyruvate phosphomutase OST-HTH PF12872.7 BAJ50700.1 - 0.13 12.1 0.0 22 4.9 0.0 2.5 2 0 0 2 2 2 0 OST-HTH/LOTUS domain MazE_antitoxin PF04014.18 BAJ50701.1 - 0.011 15.7 0.0 0.025 14.5 0.0 1.6 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin Glucokinase PF02685.16 BAJ50701.1 - 0.18 10.8 0.0 0.24 10.3 0.0 1.1 1 0 0 1 1 1 0 Glucokinase HxlR PF01638.17 BAJ50702.1 - 3.7e-28 97.2 0.1 7.8e-15 54.5 0.0 2.6 1 1 1 2 2 2 2 HxlR-like helix-turn-helix HTH_5 PF01022.20 BAJ50702.1 - 6e-08 32.4 0.2 0.00014 21.7 0.1 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 BAJ50702.1 - 1e-07 31.9 0.0 0.0018 18.2 0.0 2.2 2 0 0 2 2 2 2 Winged helix-turn-helix HTH_20 PF12840.7 BAJ50702.1 - 1.7e-05 24.8 0.0 0.084 12.9 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain PadR PF03551.14 BAJ50702.1 - 0.00055 19.8 0.0 0.008 16.1 0.0 2.7 2 1 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_27 PF13463.6 BAJ50702.1 - 0.00096 19.6 0.0 0.041 14.4 0.0 2.4 2 0 0 2 2 2 1 Winged helix DNA-binding domain Rrf2 PF02082.20 BAJ50702.1 - 0.0066 16.8 0.0 0.19 12.1 0.0 2.3 2 0 0 2 2 2 1 Transcriptional regulator Rio2_N PF09202.11 BAJ50702.1 - 0.007 16.6 0.0 2.7 8.3 0.0 2.3 2 0 0 2 2 2 1 Rio2, N-terminal Mrr_N PF14338.6 BAJ50702.1 - 0.017 15.2 0.0 21 5.3 0.0 3.3 2 2 0 3 3 3 0 Mrr N-terminal domain MarR_2 PF12802.7 BAJ50702.1 - 0.019 14.8 0.0 6.9 6.6 0.0 2.5 2 0 0 2 2 2 0 MarR family HemN_C PF06969.16 BAJ50702.1 - 0.047 13.8 0.1 0.47 10.5 0.0 2.5 3 0 0 3 3 3 0 HemN C-terminal domain HTH_24 PF13412.6 BAJ50702.1 - 0.071 12.7 0.1 5.1 6.7 0.0 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 BAJ50702.1 - 0.073 13.0 0.0 10 6.1 0.0 2.3 2 0 0 2 2 2 0 MarR family Replic_Relax PF13814.6 BAJ50702.1 - 0.096 12.7 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Replication-relaxation B-block_TFIIIC PF04182.12 BAJ50702.1 - 0.12 12.5 0.3 9 6.5 0.1 2.2 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC Protoglobin PF11563.8 BAJ50703.1 - 2.7e-33 115.1 0.1 3.6e-33 114.7 0.1 1.2 1 0 0 1 1 1 1 Protoglobin dsDNA_bind PF01984.20 BAJ50704.1 - 0.00012 22.3 0.0 0.00015 22.0 0.0 1.2 1 0 0 1 1 1 1 Double-stranded DNA-binding domain PmbA_TldD PF01523.16 BAJ50705.1 - 3.1e-41 142.1 0.0 4e-41 141.7 0.0 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Ribosomal_L16 PF00252.18 BAJ50706.1 - 1.1e-27 96.7 0.1 1.2e-27 96.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e RVT_3 PF13456.6 BAJ50707.1 - 7.8e-25 87.1 0.1 1e-24 86.7 0.1 1.2 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 BAJ50707.1 - 2.2e-18 66.8 0.1 2.9e-18 66.4 0.1 1.2 1 0 0 1 1 1 1 RNase H DUF3970 PF13113.6 BAJ50707.1 - 0.22 11.8 1.1 2.1 8.6 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3970) 2-oxoacid_dh PF00198.23 BAJ50708.1 - 4.5e-58 196.5 0.0 5.9e-58 196.1 0.0 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VbhA PF18495.1 BAJ50708.1 - 0.019 14.8 0.1 0.039 13.8 0.1 1.5 1 0 0 1 1 1 0 Antitoxin VbhA DUF1297 PF06973.12 BAJ50709.1 - 4.2e-78 261.2 0.0 5.3e-78 260.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 BAJ50709.1 - 5.3e-44 149.1 0.0 7.8e-44 148.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) DUF1297 PF06973.12 BAJ50710.1 - 1.8e-54 184.1 0.1 3.2e-54 183.3 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 BAJ50710.1 - 2.1e-39 134.3 0.0 4.4e-39 133.2 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_3 PF02655.14 BAJ50710.1 - 0.0049 16.9 0.0 0.0098 16.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 BAJ50710.1 - 0.02 14.4 0.0 0.035 13.6 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain DUF87 PF01935.17 BAJ50711.1 - 2.4e-16 60.5 0.3 5e-16 59.5 0.3 1.4 1 1 0 1 1 1 1 Helicase HerA, central domain TrwB_AAD_bind PF10412.9 BAJ50711.1 - 4.1e-06 26.0 0.0 7.4e-06 25.1 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain Abhydrolase_1 PF00561.20 BAJ50711.1 - 0.022 14.4 0.0 0.28 10.8 0.0 2.1 2 0 0 2 2 2 0 alpha/beta hydrolase fold DUF5427 PF10310.9 BAJ50711.1 - 0.21 10.5 0.0 0.28 10.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5427) NurA PF09376.10 BAJ50712.1 - 0.00072 19.3 0.1 0.0027 17.4 0.1 2.1 2 1 0 2 2 2 1 NurA domain GatB_N PF02934.15 BAJ50713.1 - 1.3e-67 228.1 0.0 2.2e-67 227.3 0.0 1.4 1 1 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 BAJ50713.1 - 1.4e-20 73.7 0.0 4e-20 72.2 0.0 1.8 1 0 0 1 1 1 1 GatB domain GAD PF02938.14 BAJ50713.1 - 1.5e-15 57.2 0.5 4.6e-14 52.4 0.3 2.5 2 0 0 2 2 2 1 GAD domain DUF3562 PF12085.8 BAJ50713.1 - 0.00079 19.0 0.5 0.39 10.4 0.0 4.2 3 1 1 4 4 4 1 Protein of unknown function (DUF3562) YqeY PF09424.10 BAJ50713.1 - 0.012 15.6 0.1 0.043 13.9 0.1 1.9 1 0 0 1 1 1 0 Yqey-like protein DprA_WH PF17782.1 BAJ50713.1 - 0.018 15.1 4.6 0.032 14.3 0.2 3.2 3 0 0 3 3 3 0 DprA winged helix domain Prok-E2_B PF14461.6 BAJ50713.1 - 0.1 12.3 0.0 0.38 10.4 0.0 1.9 1 0 0 1 1 1 0 Prokaryotic E2 family B Antimicrobial_3 PF08025.11 BAJ50713.1 - 0.14 12.1 0.2 0.34 10.9 0.2 1.5 1 0 0 1 1 1 0 Spider antimicrobial peptide Asparaginase PF00710.20 BAJ50714.1 - 1.3e-60 204.2 0.8 2.1e-60 203.6 0.8 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 BAJ50714.1 - 1.2e-31 109.3 0.4 8.4e-31 106.5 0.1 2.2 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 BAJ50714.1 - 4.3e-18 64.4 0.1 8e-18 63.5 0.1 1.5 1 0 0 1 1 1 1 GatD N-terminal domain DMA PF03474.14 BAJ50714.1 - 0.043 13.4 0.1 0.091 12.4 0.1 1.5 1 0 0 1 1 1 0 DMRTA motif T3SS_needle_reg PF09025.10 BAJ50714.1 - 0.22 11.5 0.0 24 4.9 0.0 2.3 2 0 0 2 2 2 0 YopR, type III needle-polymerisation regulator MarR_2 PF12802.7 BAJ50715.1 - 5.4e-07 29.4 0.1 8.8e-07 28.7 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 BAJ50715.1 - 1.9e-06 27.6 0.0 4.2e-06 26.5 0.0 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.6 BAJ50715.1 - 0.00012 21.5 0.0 0.00033 20.1 0.0 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding PuR_N PF09182.10 BAJ50715.1 - 0.0015 18.4 0.0 0.011 15.6 0.0 2.0 2 0 0 2 2 2 1 Bacterial purine repressor, N-terminal HTH_Crp_2 PF13545.6 BAJ50715.1 - 0.0064 16.4 0.0 0.0092 15.9 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 BAJ50715.1 - 0.025 14.5 0.0 0.086 12.8 0.0 1.8 2 0 0 2 2 2 0 HTH domain DUF1495 PF07381.11 BAJ50715.1 - 0.05 13.4 0.0 0.09 12.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) HTH_AsnC-type PF13404.6 BAJ50715.1 - 0.078 12.8 0.0 0.2 11.5 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain AA_kinase PF00696.28 BAJ50716.1 - 6.2e-24 84.9 1.0 1.5e-23 83.6 1.0 1.6 1 1 0 1 1 1 1 Amino acid kinase family UPF0175 PF03683.13 BAJ50717.1 - 1.8e-11 43.6 0.0 2.9e-11 42.9 0.0 1.5 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0175) RHH_1 PF01402.21 BAJ50717.1 - 0.00018 21.3 0.3 0.00047 20.0 0.3 1.7 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family HTH_23 PF13384.6 BAJ50717.1 - 0.016 15.0 0.2 0.043 13.6 0.1 1.8 2 0 0 2 2 2 0 Homeodomain-like domain HTH_28 PF13518.6 BAJ50717.1 - 0.078 13.1 0.2 0.25 11.5 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain IF2_N PF04760.15 BAJ50717.1 - 0.098 12.5 0.1 0.33 10.8 0.0 1.9 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region PIN_5 PF08745.11 BAJ50718.1 - 0.022 14.2 0.1 0.055 12.9 0.1 1.7 2 0 0 2 2 2 0 PINc domain ribonuclease EF-hand_7 PF13499.6 BAJ50718.1 - 0.077 13.5 0.5 0.59 10.6 0.1 2.1 2 0 0 2 2 2 0 EF-hand domain pair E1-E2_ATPase PF00122.20 BAJ50719.1 - 1.9e-48 164.3 4.7 1.9e-48 164.3 4.7 3.2 4 0 0 4 4 4 2 E1-E2 ATPase Cation_ATPase_C PF00689.21 BAJ50719.1 - 2.7e-31 108.7 3.9 2.7e-31 108.7 3.9 2.7 3 1 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 BAJ50719.1 - 1.9e-25 90.4 0.8 8e-25 88.4 0.8 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 BAJ50719.1 - 5.7e-24 83.6 0.0 1.4e-23 82.3 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 BAJ50719.1 - 2e-21 75.9 0.0 3.9e-21 74.9 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) HAD PF12710.7 BAJ50719.1 - 6.3e-06 26.7 0.1 3.3e-05 24.4 0.1 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 BAJ50719.1 - 9.7e-05 22.2 0.3 0.021 14.6 0.4 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase YtpI PF14007.6 BAJ50719.1 - 6.1 7.1 7.8 3.4 7.9 1.9 2.6 2 0 0 2 2 2 0 YtpI-like protein PIN PF01850.21 BAJ50721.1 - 2.1e-09 37.9 0.7 2.4e-09 37.7 0.7 1.0 1 0 0 1 1 1 1 PIN domain LPD7 PF18821.1 BAJ50721.1 - 0.029 14.5 0.7 0.077 13.1 0.2 1.8 2 0 0 2 2 2 0 Large polyvalent protein-associated domain 7 TcdA_TcdB PF12919.7 BAJ50721.1 - 0.076 12.3 0.3 0.087 12.1 0.3 1.1 1 0 0 1 1 1 0 TcdA/TcdB catalytic glycosyltransferase domain eRF1_2 PF03464.15 BAJ50722.1 - 5.1e-39 133.6 0.0 1.3e-38 132.3 0.0 1.7 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 BAJ50722.1 - 6.3e-27 94.3 0.6 4.1e-26 91.7 0.3 2.3 2 0 0 2 2 2 1 eRF1 domain 3 baeRF_family10 PF18854.1 BAJ50722.1 - 3.1e-19 69.6 0.1 1.2e-18 67.7 0.0 2.0 1 1 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 acVLRF1 PF18859.1 BAJ50722.1 - 3.5e-17 62.9 0.7 6.5e-16 58.8 0.0 2.4 1 1 1 2 2 2 1 Actinobacteria/chloroflexi VLRF1 release factor eRF1_1 PF03463.15 BAJ50722.1 - 4e-15 55.9 0.0 7.3e-15 55.1 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 1 HypA PF01155.19 BAJ50722.1 - 0.015 15.3 0.1 0.03 14.3 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Resolvase PF00239.21 BAJ50722.1 - 0.015 15.4 3.4 2.2 8.4 0.1 3.6 3 1 0 3 3 3 0 Resolvase, N terminal domain Ribosomal_L7Ae PF01248.26 BAJ50722.1 - 0.017 14.8 0.1 0.05 13.3 0.1 1.8 1 0 0 1 1 1 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family baeRF_family2 PF18844.1 BAJ50722.1 - 0.017 15.2 0.3 0.11 12.5 0.0 2.2 1 1 1 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 2 Ribosomal_S27e PF01667.17 BAJ50722.1 - 0.31 10.8 1.3 7.8 6.3 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein S27 zf-trcl PF13451.6 BAJ50722.1 - 0.33 10.9 2.2 0.89 9.5 2.2 1.7 1 1 0 1 1 1 0 Probable zinc-ribbon domain zinc_ribbon_4 PF13717.6 BAJ50722.1 - 0.76 9.8 3.2 3.9 7.5 3.4 2.1 1 1 1 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 BAJ50722.1 - 1.7 8.8 3.7 1.5 9.0 0.8 2.4 3 0 0 3 3 3 0 Zinc ribbon domain DUF4908 PF16252.5 BAJ50723.1 - 0.033 13.7 0.1 0.036 13.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4908) DeoC PF01791.9 BAJ50724.1 - 2.5e-37 128.8 0.1 2.9e-37 128.6 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase Radical_SAM PF04055.21 BAJ50725.1 - 5.9e-14 52.8 0.0 1.3e-13 51.6 0.0 1.6 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 BAJ50725.1 - 4.6e-05 23.7 0.1 8.6e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain HAD_2 PF13419.6 BAJ50726.1 - 2.7e-27 96.0 0.0 3.4e-27 95.7 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 BAJ50726.1 - 4e-15 56.7 0.0 5.2e-14 53.0 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 BAJ50726.1 - 1.7e-12 47.2 0.0 3.6e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like PGP_phosphatase PF09419.10 BAJ50726.1 - 0.005 16.5 0.1 0.21 11.2 0.0 2.5 2 1 1 3 3 3 1 Mitochondrial PGP phosphatase tRNA-synt_1g PF09334.11 BAJ50727.1 - 2.9e-134 447.7 0.0 3.6e-134 447.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) Anticodon_1 PF08264.13 BAJ50727.1 - 7.9e-09 35.7 0.0 1.3e-08 34.9 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1 PF00133.22 BAJ50727.1 - 2.1e-05 23.0 0.6 0.00086 17.7 0.0 3.1 2 2 1 3 3 3 1 tRNA synthetases class I (I, L, M and V) DZR PF12773.7 BAJ50727.1 - 0.00062 19.7 6.1 0.062 13.3 5.6 2.4 1 1 1 2 2 2 2 Double zinc ribbon zf-C2HC5 PF06221.13 BAJ50727.1 - 0.023 14.7 6.0 0.18 11.8 0.4 2.3 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type Zn-ribbon_8 PF09723.10 BAJ50727.1 - 0.03 14.4 8.6 0.81 9.9 1.1 2.5 2 0 0 2 2 2 0 Zinc ribbon domain tRNA-synt_1f PF01921.18 BAJ50727.1 - 0.11 11.3 0.0 0.2 10.5 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 BAJ50727.1 - 0.19 11.1 0.0 0.68 9.2 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetases class I (C) catalytic domain zf-CRD PF17979.1 BAJ50727.1 - 0.19 11.8 2.7 0.39 10.8 2.7 1.6 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions zinc-ribbons_6 PF07191.12 BAJ50727.1 - 0.33 11.0 4.3 0.45 10.5 2.0 1.7 1 1 1 2 2 2 0 zinc-ribbons HypA PF01155.19 BAJ50727.1 - 0.34 10.9 3.8 2.9 8.0 0.4 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 BAJ50727.1 - 0.72 9.4 14.8 15 5.1 0.2 4.1 3 1 0 3 3 3 0 zinc-ribbon domain DUF2797 PF10977.8 BAJ50727.1 - 0.83 9.5 2.7 1.6 8.6 2.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) zinc_ribbon_2 PF13240.6 BAJ50727.1 - 0.98 9.2 13.4 0.14 11.9 3.7 3.2 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_15 PF17032.5 BAJ50727.1 - 2.1 9.2 6.9 0.37 11.6 1.1 2.3 2 1 0 2 2 2 0 zinc-ribbon family LSM PF01423.22 BAJ50729.1 - 0.042 13.5 0.1 0.079 12.7 0.1 1.4 1 0 0 1 1 1 0 LSM domain PNP_UDP_1 PF01048.20 BAJ50730.1 - 5.7e-35 120.7 0.1 6.8e-35 120.4 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Ysc84 PF04366.12 BAJ50731.1 - 0.092 12.5 0.7 0.38 10.5 0.7 2.1 1 1 0 1 1 1 0 Las17-binding protein actin regulator Oxidored_q6 PF01058.22 BAJ50731.1 - 0.098 12.5 0.1 0.18 11.7 0.1 1.3 1 0 0 1 1 1 0 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF3568 PF12092.8 BAJ50731.1 - 4.6 7.3 8.9 1.7 8.7 4.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3568) OppC_N PF12911.7 BAJ50731.1 - 8.6 6.4 6.2 3.8 7.6 0.3 2.3 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C BPD_transp_2 PF02653.16 BAJ50732.1 - 1.3e-32 113.1 34.5 1.3e-32 113.1 34.5 1.5 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 BAJ50733.1 - 3.7e-37 127.9 34.1 3.7e-37 127.9 34.1 2.0 2 0 0 2 2 2 2 Branched-chain amino acid transport system / permease component DUF1240 PF06836.12 BAJ50733.1 - 0.33 11.5 3.5 0.2 12.2 0.4 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1240) Bmp PF02608.14 BAJ50734.1 - 2.9e-28 98.7 0.2 1.4e-15 57.1 0.0 2.1 2 0 0 2 2 2 2 ABC transporter substrate-binding protein PnrA-like BtpA PF03437.15 BAJ50735.1 - 1.7e-68 230.8 0.0 2e-68 230.6 0.0 1.0 1 0 0 1 1 1 1 BtpA family Trp_syntA PF00290.20 BAJ50735.1 - 2e-05 23.6 0.0 6.4e-05 21.9 0.0 1.8 2 1 0 2 2 2 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 BAJ50735.1 - 0.12 11.8 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 Histidine biosynthesis protein PfkB PF00294.24 BAJ50736.1 - 1.7e-53 181.9 0.1 2e-53 181.7 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase ADP_PFK_GK PF04587.15 BAJ50736.1 - 0.059 11.9 0.0 2 6.9 0.0 2.2 2 0 0 2 2 2 0 ADP-specific Phosphofructokinase/Glucokinase conserved region dCMP_cyt_deam_1 PF00383.23 BAJ50737.1 - 2.1e-17 62.8 0.1 2.4e-17 62.6 0.1 1.0 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region dCMP_cyt_deam_2 PF08211.12 BAJ50737.1 - 2.9e-13 50.2 1.3 3.6e-12 46.6 0.5 2.0 2 0 0 2 2 2 1 Cytidine and deoxycytidylate deaminase zinc-binding region LmjF365940-deam PF14421.6 BAJ50737.1 - 2.8e-05 23.8 1.8 0.0078 15.8 0.1 2.1 1 1 1 2 2 2 2 A distinct subfamily of CDD/CDA-like deaminases IU_nuc_hydro PF01156.19 BAJ50738.1 - 3.8e-80 269.7 0.0 4.3e-80 269.5 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase DeoC PF01791.9 BAJ50739.1 - 1e-12 48.2 2.0 1.4e-12 47.8 2.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase DUF4777 PF16007.5 BAJ50739.1 - 0.014 15.6 0.3 0.26 11.6 0.0 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4777) FMN_dh PF01070.18 BAJ50739.1 - 0.13 11.3 4.1 0.18 10.8 4.1 1.6 1 1 0 1 1 1 0 FMN-dependent dehydrogenase PfkB PF00294.24 BAJ50740.1 - 1.1e-56 192.3 2.8 1.4e-56 192.0 2.8 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 BAJ50740.1 - 7.2e-14 51.7 0.1 1.1e-13 51.1 0.1 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 BAJ50740.1 - 2.6e-09 36.9 0.0 4.7e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Carbohydrate kinase PNP_UDP_1 PF01048.20 BAJ50741.1 - 7.1e-38 130.2 0.1 8.6e-38 129.9 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily BtpA PF03437.15 BAJ50742.1 - 8.7e-74 248.2 0.0 9.9e-74 248.0 0.0 1.0 1 0 0 1 1 1 1 BtpA family Trp_syntA PF00290.20 BAJ50742.1 - 0.016 14.0 0.1 0.035 13.0 0.0 1.6 2 0 0 2 2 2 0 Tryptophan synthase alpha chain ABC_tran PF00005.27 BAJ50743.1 - 6.6e-49 166.0 0.0 1.9e-29 102.9 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 BAJ50743.1 - 0.0013 18.6 3.4 0.75 9.5 0.2 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAJ50743.1 - 0.014 15.9 0.0 0.023 15.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 BAJ50743.1 - 0.032 14.2 0.2 0.69 9.8 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase AAA_25 PF13481.6 BAJ50743.1 - 0.095 12.3 0.1 0.69 9.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 BAJ50743.1 - 0.23 10.9 0.3 5.3 6.4 0.3 2.3 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain IstB_IS21 PF01695.17 BAJ50743.1 - 0.27 10.9 2.1 8.7 6.0 0.0 2.8 3 1 0 3 3 3 0 IstB-like ATP binding protein MmgE_PrpD PF03972.14 BAJ50744.1 - 2.7e-135 451.3 0.2 3.1e-135 451.1 0.2 1.0 1 0 0 1 1 1 1 MmgE/PrpD family Citrate_synt PF00285.21 BAJ50745.1 - 2.1e-110 369.2 0.1 2.4e-110 369.0 0.1 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain tRNA-synt_1b PF00579.25 BAJ50746.1 - 4.9e-22 78.6 0.0 8.5e-22 77.8 0.0 1.4 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) ABC_tran PF00005.27 BAJ50747.1 - 9.9e-22 77.9 0.0 1.6e-21 77.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50747.1 - 1.1e-09 38.5 5.2 0.00021 21.2 0.3 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ50747.1 - 4.6e-07 29.5 0.1 0.016 14.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAJ50747.1 - 0.00021 21.8 0.3 0.00039 21.0 0.3 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 BAJ50747.1 - 0.0012 18.6 0.0 0.0024 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ50747.1 - 0.0031 17.9 0.0 0.0036 17.7 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_13 PF13166.6 BAJ50747.1 - 0.0042 15.8 0.2 0.078 11.6 0.2 2.1 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 BAJ50747.1 - 0.0042 16.8 0.1 0.0071 16.1 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 BAJ50747.1 - 0.0056 16.9 0.2 0.011 16.0 0.2 1.7 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 BAJ50747.1 - 0.0061 16.3 0.7 0.016 15.0 0.3 1.7 1 1 1 2 2 2 1 AAA ATPase domain AAA PF00004.29 BAJ50747.1 - 0.0077 16.7 0.0 0.012 16.0 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 BAJ50747.1 - 0.012 15.9 0.0 0.015 15.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 BAJ50747.1 - 0.014 15.3 0.0 0.025 14.5 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_14 PF13173.6 BAJ50747.1 - 0.02 14.9 0.3 0.14 12.2 0.2 2.0 1 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 BAJ50747.1 - 0.029 13.7 0.0 0.043 13.1 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin DLIC PF05783.11 BAJ50747.1 - 0.037 12.9 0.1 0.054 12.3 0.1 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_5 PF07728.14 BAJ50747.1 - 0.051 13.6 0.1 0.12 12.3 0.1 1.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) NACHT PF05729.12 BAJ50747.1 - 0.06 13.3 1.6 0.063 13.2 0.5 1.6 2 0 0 2 2 2 0 NACHT domain NTPase_1 PF03266.15 BAJ50747.1 - 0.075 12.9 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 NTPase AAA_24 PF13479.6 BAJ50747.1 - 0.086 12.6 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 BAJ50747.1 - 0.12 11.5 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) T2SSE PF00437.20 BAJ50747.1 - 0.13 11.3 0.1 0.21 10.6 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein SRP54 PF00448.22 BAJ50747.1 - 0.2 11.3 0.2 0.35 10.5 0.2 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain cobW PF02492.19 BAJ50747.1 - 0.26 10.9 1.1 0.75 9.4 0.6 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ABC_ATPase PF09818.9 BAJ50747.1 - 0.37 9.5 2.2 0.39 9.4 0.5 1.7 2 0 0 2 2 2 0 Predicted ATPase of the ABC class DUF4514 PF14986.6 BAJ50748.1 - 0.036 14.0 1.6 0.68 9.9 0.2 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4514) BPD_transp_1 PF00528.22 BAJ50748.1 - 0.17 11.6 31.8 0.013 15.3 25.5 2.0 2 0 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.6 BAJ50749.1 - 1.3e-06 28.3 0.0 1.4e-05 25.0 0.0 2.1 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein TOBE PF03459.17 BAJ50750.1 - 7.2e-15 55.0 0.2 1.7e-14 53.9 0.1 1.7 2 0 0 2 2 2 1 TOBE domain HTH_29 PF13551.6 BAJ50750.1 - 1.7e-05 24.7 0.1 3.3e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn helix HTH_1 PF00126.27 BAJ50750.1 - 0.00011 22.1 0.0 0.0002 21.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF2764 PF10962.8 BAJ50750.1 - 0.0054 16.3 0.0 0.0076 15.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2764) HTH_Tnp_ISL3 PF13542.6 BAJ50750.1 - 0.037 13.5 0.0 0.067 12.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 TOBE_2 PF08402.10 BAJ50750.1 - 0.038 14.2 0.0 0.072 13.3 0.0 1.4 1 0 0 1 1 1 0 TOBE domain HTH_28 PF13518.6 BAJ50750.1 - 0.12 12.6 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain LCAT PF02450.15 BAJ50750.1 - 0.14 11.3 0.0 0.18 10.9 0.0 1.2 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase Semialdhyde_dhC PF02774.18 BAJ50751.1 - 1.3e-34 119.9 0.0 2.1e-34 119.2 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 BAJ50751.1 - 1.5e-31 109.3 0.0 3.2e-31 108.3 0.0 1.6 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_C PF02800.20 BAJ50751.1 - 0.0012 18.5 0.2 0.03 13.9 0.0 2.4 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GFO_IDH_MocA PF01408.22 BAJ50751.1 - 0.0048 17.7 0.0 0.013 16.3 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold DXP_reductoisom PF02670.16 BAJ50751.1 - 0.024 15.4 0.0 0.045 14.5 0.0 1.4 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase DeoC PF01791.9 BAJ50752.1 - 7.8e-42 143.5 0.0 9e-42 143.3 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase TMP-TENI PF02581.17 BAJ50752.1 - 0.0018 17.6 0.0 1.1 8.6 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase DUF4038 PF13204.6 BAJ50752.1 - 0.13 11.9 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4038) DHQS PF01959.16 BAJ50753.1 - 6.2e-105 351.0 2.5 7.2e-105 350.8 2.5 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II Hint PF01079.20 BAJ50753.1 - 0.017 14.7 0.0 0.032 13.7 0.0 1.4 1 0 0 1 1 1 0 Hint module DHquinase_I PF01487.15 BAJ50754.1 - 2.2e-47 162.2 0.0 2.7e-47 162.0 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase Shikimate_dh_N PF08501.11 BAJ50755.1 - 6.2e-17 61.6 0.0 3.6e-16 59.2 0.0 2.0 2 0 0 2 2 2 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 BAJ50755.1 - 1.1e-10 41.1 0.2 2.2e-10 40.1 0.2 1.5 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 BAJ50755.1 - 0.091 13.0 0.0 0.89 9.8 0.0 2.2 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GHMP_kinases_N PF00288.26 BAJ50756.1 - 1.6e-10 41.1 3.2 1.6e-10 41.1 3.2 3.0 3 1 0 3 3 3 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 BAJ50756.1 - 0.00036 20.8 0.3 0.0011 19.3 0.3 1.8 1 0 0 1 1 1 1 GHMP kinases C terminal DUF1269 PF06897.12 BAJ50756.1 - 0.45 10.8 5.0 0.47 10.8 0.1 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF1269) EPSP_synthase PF00275.20 BAJ50757.1 - 3.9e-107 358.5 0.1 4.9e-107 358.2 0.1 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DUF4271 PF14093.6 BAJ50758.1 - 0.0057 16.6 4.4 0.0061 16.5 4.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4271) TraG_N PF07916.11 BAJ50758.1 - 0.052 12.4 6.8 0.063 12.1 6.8 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region OST3_OST6 PF04756.13 BAJ50758.1 - 0.12 11.7 2.1 0.13 11.6 2.1 1.0 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family VirB3 PF05101.13 BAJ50759.1 - 0.056 13.7 2.3 0.11 12.8 1.8 1.7 1 1 1 2 2 2 0 Type IV secretory pathway, VirB3-like protein DUF3119 PF11317.8 BAJ50759.1 - 0.35 11.1 2.1 2.5 8.4 2.1 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3119) ECF-ribofla_trS PF07155.12 BAJ50760.1 - 0.00034 20.6 10.8 0.00034 20.6 10.8 2.2 1 1 1 2 2 2 1 ECF-type riboflavin transporter, S component GHMP_kinases_N PF00288.26 BAJ50761.1 - 2e-05 24.8 0.2 3.5e-05 24.0 0.2 1.4 1 0 0 1 1 1 1 GHMP kinases N terminal domain MAF_flag10 PF01973.18 BAJ50762.1 - 1.3e-23 83.5 0.0 2.2e-23 82.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF115 GCHY-1 PF02649.14 BAJ50763.1 - 2.2e-59 201.1 0.1 2.7e-59 200.8 0.1 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 RICTOR_V PF14668.6 BAJ50763.1 - 0.21 11.9 0.1 0.58 10.4 0.0 1.7 2 0 0 2 2 2 0 Rapamycin-insensitive companion of mTOR, domain 5 DNA_ligase_A_M PF01068.21 BAJ50764.1 - 5.7e-62 209.0 0.1 8.9e-62 208.4 0.1 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 BAJ50764.1 - 2.2e-36 125.8 0.0 3.4e-36 125.1 0.0 1.3 1 0 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 BAJ50764.1 - 1.6e-22 79.9 0.1 4.6e-22 78.5 0.0 1.8 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 BAJ50764.1 - 2.1e-05 24.9 0.1 4e-05 24.0 0.1 1.4 1 0 0 1 1 1 1 RNA ligase Lipid_DES PF08557.10 BAJ50764.1 - 0.049 13.1 0.5 8.8 5.9 0.0 3.1 3 0 0 3 3 3 0 Sphingolipid Delta4-desaturase (DES) PucR PF07905.11 BAJ50764.1 - 0.097 13.0 0.0 0.3 11.4 0.0 1.8 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family DUF131 PF01998.17 BAJ50765.1 - 0.00037 20.1 0.6 0.00037 20.1 0.6 2.1 2 0 0 2 2 2 1 Protein of unknown function DUF131 Baculo_11_kDa PF06143.11 BAJ50765.1 - 0.13 11.9 6.6 0.21 11.2 0.2 2.1 2 0 0 2 2 2 0 Baculovirus 11 kDa family Herpes_LMP2 PF07415.11 BAJ50765.1 - 0.18 10.6 4.8 0.19 10.5 4.8 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein Sigma_reg_N PF13800.6 BAJ50765.1 - 0.83 10.0 5.5 2.7 8.3 0.4 2.1 2 0 0 2 2 2 0 Sigma factor regulator N-terminal ABC2_membrane_2 PF12679.7 BAJ50765.1 - 2.3 7.4 8.0 2.9 7.1 8.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Antimicrobial10 PF08105.11 BAJ50765.1 - 6.3 7.0 5.7 1 9.5 0.2 2.1 2 0 0 2 2 2 0 Metchnikowin family TrmB PF01978.19 BAJ50766.1 - 6.1e-24 83.7 0.4 2.8e-23 81.6 0.0 2.0 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 BAJ50766.1 - 9.2e-09 34.8 0.2 1.3e-08 34.3 0.2 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB Rrf2 PF02082.20 BAJ50766.1 - 0.00093 19.5 0.0 0.0027 18.0 0.0 1.8 1 0 0 1 1 1 1 Transcriptional regulator Penicillinase_R PF03965.16 BAJ50766.1 - 0.0025 18.1 0.0 0.008 16.5 0.0 1.9 1 1 0 1 1 1 1 Penicillinase repressor HTH_IclR PF09339.10 BAJ50766.1 - 0.013 15.3 0.0 0.031 14.1 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_27 PF13463.6 BAJ50766.1 - 0.018 15.6 0.0 0.048 14.2 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain PadR PF03551.14 BAJ50766.1 - 0.12 12.3 0.0 0.27 11.2 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family QueT PF06177.11 BAJ50767.1 - 2.1e-30 105.9 19.1 2.4e-30 105.7 19.1 1.1 1 0 0 1 1 1 1 QueT transporter ATPase PF06745.13 BAJ50768.1 - 1e-18 67.5 0.0 1.3e-18 67.2 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_16 PF13191.6 BAJ50768.1 - 0.001 19.5 0.1 0.002 18.6 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 BAJ50768.1 - 0.0025 17.4 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 BAJ50768.1 - 0.0037 17.8 0.0 0.0054 17.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter NACHT PF05729.12 BAJ50768.1 - 0.023 14.6 0.1 0.34 10.8 0.1 2.2 1 1 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 BAJ50768.1 - 0.049 13.8 0.0 0.077 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 BAJ50768.1 - 0.064 13.5 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAJ50768.1 - 0.076 12.8 0.0 0.2 11.4 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain IstB_IS21 PF01695.17 BAJ50768.1 - 0.12 12.1 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein SRP54 PF00448.22 BAJ50768.1 - 0.14 11.8 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain RsgA_GTPase PF03193.16 BAJ50768.1 - 0.14 12.0 0.1 0.25 11.2 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 BAJ50768.1 - 0.15 11.7 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 BAJ50768.1 - 0.16 12.2 0.0 0.32 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain HEPN PF05168.14 BAJ50769.1 - 1.2e-25 90.0 0.1 1.4e-25 89.8 0.1 1.0 1 0 0 1 1 1 1 HEPN domain TPR_2 PF07719.17 BAJ50769.1 - 0.067 13.3 0.1 0.4 10.9 0.0 2.3 2 1 0 3 3 3 0 Tetratricopeptide repeat NTP_transf_2 PF01909.23 BAJ50770.1 - 6e-12 45.7 0.0 6.9e-12 45.5 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ50770.1 - 1.2e-07 31.7 0.0 1.4e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF294 PF03445.13 BAJ50770.1 - 0.00095 19.0 0.0 0.0014 18.5 0.0 1.3 1 0 0 1 1 1 1 Putative nucleotidyltransferase DUF294 DNA_pol_B_palm PF14792.6 BAJ50770.1 - 0.0074 16.5 0.0 0.0088 16.2 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm Peripla_BP_2 PF01497.18 BAJ50770.1 - 0.036 13.6 0.0 0.052 13.1 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein SieB PF14163.6 BAJ50770.1 - 0.063 12.8 0.0 0.066 12.7 0.0 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B V-SNARE PF05008.15 BAJ50770.1 - 0.11 12.8 0.9 0.21 12.0 0.2 1.7 2 0 0 2 2 2 0 Vesicle transport v-SNARE protein N-terminus Radical_SAM PF04055.21 BAJ50771.1 - 9.1e-25 88.0 0.1 2.2e-24 86.7 0.1 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 BAJ50771.1 - 4.6e-07 30.0 0.0 1.4e-06 28.5 0.0 1.8 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 BAJ50771.1 - 1.6e-06 28.4 0.0 3.4e-06 27.4 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain ATPase PF06745.13 BAJ50772.1 - 2.1e-07 30.5 0.0 4e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 KaiC ChlI PF13541.6 BAJ50772.1 - 4.5e-05 23.3 0.0 0.0001 22.1 0.0 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_25 PF13481.6 BAJ50772.1 - 0.057 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain EF-1_beta_acid PF10587.9 BAJ50772.1 - 0.4 11.2 3.1 2.1 8.9 2.0 2.3 2 0 0 2 2 2 0 Eukaryotic elongation factor 1 beta central acidic region LAGLIDADG_3 PF14528.6 BAJ50774.1 - 0.00017 21.8 0.1 0.0041 17.4 0.1 2.8 2 1 0 2 2 2 1 LAGLIDADG-like domain Phage_int_SAM_4 PF13495.6 BAJ50774.1 - 0.1 13.1 0.0 0.76 10.3 0.0 2.3 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain GD_N PF16030.5 BAJ50776.1 - 0.0046 17.2 0.0 0.0097 16.2 0.0 1.4 1 0 0 1 1 1 1 Serine protease gd N-terminus VAPB_antitox PF02697.14 BAJ50777.1 - 2.5e-22 79.4 0.5 2.8e-22 79.2 0.5 1.0 1 0 0 1 1 1 1 Putative antitoxin SeqA_N PF17206.3 BAJ50777.1 - 0.54 9.6 4.7 0.16 11.3 0.7 2.2 2 1 0 2 2 2 0 SeqA protein N-terminal domain PIN PF01850.21 BAJ50778.1 - 1.9e-06 28.4 0.1 1.9e-06 28.4 0.1 1.1 1 0 0 1 1 1 1 PIN domain Pterin_4a PF01329.19 BAJ50779.1 - 6.6e-30 103.1 0.3 7.8e-30 102.9 0.3 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase PAG PF15347.6 BAJ50779.1 - 0.0084 15.2 0.0 0.0095 15.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoprotein associated with glycosphingolipid-enriched Glycos_transf_3 PF00591.21 BAJ50780.1 - 8.2e-71 238.6 0.0 1.1e-70 238.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 BAJ50780.1 - 3.3e-13 49.3 0.1 1.6e-12 47.1 0.0 2.3 3 0 0 3 3 3 1 Glycosyl transferase family, helical bundle domain IGPS PF00218.21 BAJ50781.1 - 4.9e-47 160.2 0.0 5.4e-47 160.1 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase DUF2787 PF10980.8 BAJ50781.1 - 0.005 17.0 0.0 0.0078 16.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2787) PRAI PF00697.22 BAJ50782.1 - 1.3e-26 93.6 0.0 1.7e-26 93.2 0.0 1.1 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DUF1307 PF06998.11 BAJ50782.1 - 0.1 12.6 0.1 0.22 11.5 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) PALP PF00291.25 BAJ50783.1 - 2.5e-44 151.9 0.1 3.2e-44 151.5 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Trp_syntA PF00290.20 BAJ50784.1 - 1.3e-35 122.5 0.0 1.7e-35 122.2 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain ThiG PF05690.14 BAJ50784.1 - 0.0059 15.9 0.5 0.0096 15.2 0.5 1.2 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG HMGL-like PF00682.19 BAJ50784.1 - 0.049 13.2 0.0 0.12 11.9 0.0 1.7 1 1 0 1 1 1 0 HMGL-like RHH_6 PF16762.5 BAJ50786.1 - 0.00029 21.4 0.0 0.00039 21.0 0.0 1.2 1 0 0 1 1 1 1 Ribbon-helix-helix domain PIN PF01850.21 BAJ50787.1 - 2.5e-09 37.7 0.3 2.9e-09 37.5 0.3 1.1 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 BAJ50787.1 - 0.093 12.5 0.2 0.25 11.1 0.1 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF5615) Cas_NE0113 PF09623.10 BAJ50789.1 - 5.1e-19 68.8 0.0 7.2e-19 68.3 0.0 1.4 1 0 0 1 1 1 1 CRISPR-associated protein NE0113 (Cas_NE0113) Cas_APE2256 PF09651.10 BAJ50789.1 - 0.00046 20.1 0.1 0.00089 19.2 0.1 1.6 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_APE2256) Cas_Cas02710 PF09670.10 BAJ50789.1 - 0.0016 17.4 0.0 0.0021 16.9 0.0 1.2 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) AXE1 PF05448.12 BAJ50789.1 - 0.092 11.4 0.1 0.14 10.8 0.1 1.2 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) ADP_ribosyl_GH PF03747.14 BAJ50790.1 - 0.034 13.9 0.3 0.062 13.0 0.3 1.3 1 0 0 1 1 1 0 ADP-ribosylglycohydrolase Importin_rep_3 PF18806.1 BAJ50790.1 - 0.11 12.6 0.0 17 5.6 0.0 2.5 2 0 0 2 2 2 0 Importin 13 repeat FRB_dom PF08771.11 BAJ50790.1 - 0.14 12.6 0.2 0.33 11.4 0.2 1.5 1 0 0 1 1 1 0 FKBP12-rapamycin binding domain MnmE_helical PF12631.7 BAJ50790.1 - 0.2 11.8 2.4 0.36 11.0 2.4 1.4 1 1 0 1 1 1 0 MnmE helical domain DNA_primase_lrg PF04104.14 BAJ50792.1 - 1.6e-23 83.5 0.1 2.9e-23 82.6 0.1 1.4 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit COG6 PF06419.11 BAJ50792.1 - 0.016 13.4 0.1 0.024 12.9 0.1 1.4 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 Hep_core_N PF08290.11 BAJ50792.1 - 0.068 13.1 0.2 0.15 12.1 0.2 1.5 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger DUF87 PF01935.17 BAJ50793.1 - 3.5e-10 40.3 0.0 8.5e-10 39.1 0.0 1.6 1 1 0 1 1 1 1 Helicase HerA, central domain TrwB_AAD_bind PF10412.9 BAJ50793.1 - 1.7e-07 30.5 0.0 3.4e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_16 PF13191.6 BAJ50793.1 - 3.2e-06 27.6 0.1 7e-06 26.5 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain DUF853 PF05872.12 BAJ50793.1 - 1.5e-05 23.8 0.0 0.00015 20.5 0.0 2.1 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) AAA_22 PF13401.6 BAJ50793.1 - 2.5e-05 24.6 0.0 0.012 15.9 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_10 PF12846.7 BAJ50793.1 - 0.00023 20.2 0.0 0.00042 19.3 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain T2SSE PF00437.20 BAJ50793.1 - 0.00038 19.6 0.0 0.00065 18.8 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein MobB PF03205.14 BAJ50793.1 - 0.00062 19.7 0.0 0.0011 18.8 0.0 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B DUF815 PF05673.13 BAJ50793.1 - 0.00074 18.8 0.0 0.0011 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_7 PF12775.7 BAJ50793.1 - 0.0017 17.9 0.0 0.0032 17.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region NTPase_1 PF03266.15 BAJ50793.1 - 0.0019 18.1 0.1 0.0056 16.6 0.0 1.9 2 0 0 2 2 2 1 NTPase FtsK_SpoIIIE PF01580.18 BAJ50793.1 - 0.0093 15.3 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_5 PF07728.14 BAJ50793.1 - 0.02 14.9 0.0 0.049 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) LpxK PF02606.14 BAJ50793.1 - 0.029 13.5 0.0 0.045 12.8 0.0 1.2 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase Zeta_toxin PF06414.12 BAJ50793.1 - 0.029 13.6 0.0 0.054 12.8 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 BAJ50793.1 - 0.035 13.8 0.0 0.087 12.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 BAJ50793.1 - 0.047 13.1 0.0 0.6 9.5 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein CbiA PF01656.23 BAJ50793.1 - 0.05 13.7 0.0 0.097 12.7 0.0 1.6 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain cobW PF02492.19 BAJ50793.1 - 0.057 13.0 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain RMP PF14996.6 BAJ50793.1 - 0.062 13.5 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Retinal Maintenance ATP_bind_1 PF03029.17 BAJ50793.1 - 0.068 12.9 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein ATPase_2 PF01637.18 BAJ50793.1 - 0.068 13.1 0.0 0.16 11.9 0.0 1.8 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA PF00004.29 BAJ50793.1 - 0.076 13.4 0.0 3.1 8.2 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 BAJ50793.1 - 0.087 11.8 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 BAJ50793.1 - 0.1 12.3 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 BAJ50793.1 - 0.14 11.9 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation SRP54 PF00448.22 BAJ50793.1 - 0.17 11.5 0.0 0.32 10.6 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NACHT PF05729.12 BAJ50793.1 - 0.18 11.7 0.0 0.35 10.8 0.0 1.5 1 0 0 1 1 1 0 NACHT domain DUF3082 PF11282.8 BAJ50794.1 - 0.0069 16.6 1.7 0.0069 16.6 1.7 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3082) BTP PF05232.12 BAJ50794.1 - 0.33 11.1 3.6 0.52 10.4 3.3 1.6 1 1 0 1 1 1 0 Chlorhexidine efflux transporter DUF1887 PF09002.11 BAJ50795.1 - 0.0034 16.1 0.0 0.0047 15.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1887) SMC_N PF02463.19 BAJ50797.1 - 1.3e-26 93.4 0.0 5.3e-15 55.5 0.0 2.2 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAJ50797.1 - 6e-22 79.1 28.7 4.4e-17 63.3 28.7 3.7 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 BAJ50797.1 - 2.6e-17 63.6 0.1 3.3e-10 40.3 0.0 2.6 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 BAJ50797.1 - 4.2e-16 59.6 0.0 8.8e-10 38.8 0.0 2.7 3 0 0 3 3 3 2 AAA ATPase domain AAA_29 PF13555.6 BAJ50797.1 - 3.7e-08 33.0 0.0 6.6e-08 32.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 BAJ50797.1 - 5.8e-06 26.0 0.3 5.8e-06 26.0 0.3 3.7 3 1 0 3 3 3 1 AAA domain SbcCD_C PF13558.6 BAJ50797.1 - 7.8e-06 26.0 0.0 1.9e-05 24.8 0.0 1.7 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ABC_tran PF00005.27 BAJ50797.1 - 1.8e-05 25.2 0.2 0.052 14.1 0.4 3.6 2 2 0 2 2 2 1 ABC transporter Seryl_tRNA_N PF02403.22 BAJ50797.1 - 0.00028 21.1 34.3 0.21 11.8 2.4 5.4 3 2 2 5 5 5 3 Seryl-tRNA synthetase N-terminal domain Syntaxin_2 PF14523.6 BAJ50797.1 - 0.00066 20.0 8.4 0.14 12.6 0.0 4.7 3 1 1 4 4 4 1 Syntaxin-like protein Spc7 PF08317.11 BAJ50797.1 - 0.0014 17.6 41.6 0.0041 16.0 4.8 4.1 1 1 3 4 4 4 3 Spc7 kinetochore protein OmpH PF03938.14 BAJ50797.1 - 0.0052 17.1 0.5 0.0052 17.1 0.5 4.4 2 1 1 3 3 3 1 Outer membrane protein (OmpH-like) DivIC PF04977.15 BAJ50797.1 - 0.01 15.6 2.9 0.01 15.6 2.9 5.9 6 0 0 6 6 6 0 Septum formation initiator ZapB PF06005.12 BAJ50797.1 - 0.013 15.9 2.9 0.013 15.9 2.9 6.0 6 0 0 6 6 5 0 Cell division protein ZapB RsgA_GTPase PF03193.16 BAJ50797.1 - 0.015 15.2 0.1 0.17 11.8 0.0 2.4 2 0 0 2 2 2 0 RsgA GTPase Halogen_Hydrol PF10112.9 BAJ50797.1 - 0.03 14.3 7.1 0.36 10.8 1.1 2.9 2 1 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PLU-1 PF08429.11 BAJ50797.1 - 0.039 13.1 9.2 1 8.4 3.0 3.2 1 1 0 1 1 1 0 PLU-1-like protein TFA2_Winged_2 PF18121.1 BAJ50797.1 - 0.1 12.3 3.1 1.1 9.0 0.1 3.2 2 0 0 2 2 2 0 TFA2 Winged helix domain 2 GAS PF13851.6 BAJ50797.1 - 0.46 9.8 33.2 0.65 9.3 4.4 4.5 3 1 0 4 4 4 0 Growth-arrest specific micro-tubule binding DUF489 PF04356.12 BAJ50797.1 - 0.76 9.8 8.2 1.2 9.1 0.4 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF489) AAA_13 PF13166.6 BAJ50797.1 - 0.8 8.3 23.7 0.25 9.9 3.9 4.0 3 2 0 4 4 4 0 AAA domain DUF1045 PF06299.12 BAJ50797.1 - 1.5 8.8 4.4 1.6 8.7 1.1 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1045) FlaC_arch PF05377.11 BAJ50797.1 - 1.5 9.3 19.8 26 5.3 2.2 5.7 5 1 0 5 5 4 0 Flagella accessory protein C (FlaC) DUF5082 PF16888.5 BAJ50797.1 - 2.1 8.6 19.7 8.6 6.7 0.4 4.9 4 1 0 4 4 4 0 Domain of unknown function (DUF5082) Nsp1_C PF05064.13 BAJ50797.1 - 2.8 7.8 11.3 1.5 8.7 2.8 3.8 3 0 0 3 3 3 0 Nsp1-like C-terminal region STAT_alpha PF01017.20 BAJ50797.1 - 4.1 7.3 7.9 19 5.1 0.2 3.1 2 1 0 2 2 2 0 STAT protein, all-alpha domain PCRF PF03462.18 BAJ50797.1 - 6.4 6.6 19.2 2.9 7.7 3.7 3.9 3 1 1 4 4 4 0 PCRF domain V_ATPase_I PF01496.19 BAJ50797.1 - 8 4.2 12.6 0.6 8.0 0.0 2.9 2 1 1 3 3 3 0 V-type ATPase 116kDa subunit family Com_YlbF PF06133.11 BAJ50797.1 - 8.7 7.0 22.3 1.9 9.1 3.2 4.5 4 1 0 4 4 4 0 Control of competence regulator ComK, YlbF/YmcA Metallophos_2 PF12850.7 BAJ50798.1 - 4.7e-11 43.2 3.1 9.2e-10 39.0 1.9 2.8 2 1 0 2 2 2 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 BAJ50798.1 - 2.3e-09 38.1 1.2 2.3e-09 38.1 1.2 1.7 2 1 0 2 2 2 1 Calcineurin-like phosphoesterase DUF87 PF01935.17 BAJ50799.1 - 1.3e-34 120.3 0.8 1.8e-34 119.8 0.8 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 BAJ50799.1 - 0.00037 19.2 0.0 0.035 12.7 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_10 PF12846.7 BAJ50799.1 - 0.00057 18.9 0.5 1.5 7.6 0.0 3.0 2 1 1 3 3 3 2 AAA-like domain TrwB_AAD_bind PF10412.9 BAJ50799.1 - 0.0015 17.5 0.2 0.079 11.9 0.0 2.6 3 0 0 3 3 3 1 Type IV secretion-system coupling protein DNA-binding domain FtsK_SpoIIIE PF01580.18 BAJ50799.1 - 0.0027 17.1 0.2 0.7 9.2 0.0 2.4 1 1 0 2 2 2 2 FtsK/SpoIIIE family HAS-barrel PF09378.10 BAJ50799.1 - 0.0029 17.7 0.8 0.021 14.9 0.5 2.8 2 1 0 2 2 2 1 HAS barrel domain ABC_tran PF00005.27 BAJ50799.1 - 0.0083 16.6 0.0 0.015 15.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter DUF188 PF02639.14 BAJ50799.1 - 0.028 14.1 0.0 0.076 12.7 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 NurA PF09376.10 BAJ50800.1 - 2.3e-24 86.4 0.8 3.2e-24 86.0 0.8 1.2 1 0 0 1 1 1 1 NurA domain SWIRM-assoc_3 PF16498.5 BAJ50800.1 - 0.12 12.6 0.0 0.4 11.0 0.0 1.9 1 0 0 1 1 1 0 SWIRM-associated domain at the C-terminal Helicase_C PF00271.31 BAJ50804.1 - 1.3e-21 77.0 0.1 6.1e-21 74.9 0.1 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 BAJ50804.1 - 7.9e-17 61.6 0.0 6.1e-16 58.7 0.0 2.3 3 0 0 3 3 3 1 DEAD/DEAH box helicase ResIII PF04851.15 BAJ50804.1 - 3e-15 56.6 0.0 8.9e-15 55.1 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 BAJ50804.1 - 0.029 14.1 0.0 0.066 12.9 0.0 1.6 1 0 0 1 1 1 0 SWI2/SNF2 ATPase ERCC3_RAD25_C PF16203.5 BAJ50804.1 - 0.045 12.9 0.0 0.085 12.0 0.0 1.4 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase Zot PF05707.12 BAJ50804.1 - 0.054 13.1 0.4 0.46 10.1 0.2 2.7 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) Methyltransf_24 PF13578.6 BAJ50804.1 - 0.056 14.5 0.0 18 6.4 0.0 2.7 2 0 0 2 2 2 0 Methyltransferase domain FeoB_Cyto PF17910.1 BAJ50804.1 - 0.19 12.3 1.8 1 9.9 0.4 2.6 2 0 0 2 2 2 0 FeoB cytosolic helical domain Hjc PF01870.18 BAJ50805.1 - 2.8e-09 36.8 0.3 3.3e-09 36.6 0.3 1.1 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) NERD PF08378.11 BAJ50805.1 - 0.003 18.0 0.0 0.0036 17.7 0.0 1.1 1 0 0 1 1 1 1 Nuclease-related domain VRR_NUC PF08774.11 BAJ50805.1 - 0.0046 17.0 0.1 0.0053 16.8 0.1 1.1 1 0 0 1 1 1 1 VRR-NUC domain Mrr_cat PF04471.12 BAJ50805.1 - 0.0064 16.5 0.2 0.093 12.8 0.0 1.9 1 1 1 2 2 2 1 Restriction endonuclease MTES_1575 PF18741.1 BAJ50805.1 - 0.042 14.0 0.1 0.14 12.3 0.0 1.7 1 1 1 2 2 2 0 REase_MTES_1575 DUF4263 PF14082.6 BAJ50805.1 - 0.068 13.4 0.0 0.078 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4263) DUF996 PF06195.13 BAJ50807.1 - 8.2e-31 107.1 13.9 9.9e-31 106.8 13.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF996) DUF4481 PF14800.6 BAJ50807.1 - 0.084 12.3 2.8 0.053 13.0 1.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4481) DUF973 PF06157.11 BAJ50807.1 - 0.34 9.9 13.7 0.54 9.2 13.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF973) ThrE PF06738.12 BAJ50807.1 - 0.37 10.1 8.1 0.59 9.5 8.1 1.4 1 1 0 1 1 1 0 Putative threonine/serine exporter ABC2_membrane_5 PF13346.6 BAJ50807.1 - 0.94 9.0 13.9 2 7.9 13.9 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF2371 PF10177.9 BAJ50807.1 - 1.1 9.5 4.0 0.29 11.3 1.0 1.6 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2371) 7tm_6 PF02949.20 BAJ50807.1 - 4.2 6.4 7.4 0.21 10.6 0.8 1.9 1 1 1 2 2 2 0 7tm Odorant receptor TFIIB PF00382.19 BAJ50808.1 - 7.6e-12 45.1 2.1 8.1e-10 38.6 0.0 3.1 2 1 0 2 2 2 1 Transcription factor TFIIB repeat Cyclin_N PF00134.23 BAJ50808.1 - 0.0033 17.1 0.1 0.094 12.5 0.0 2.2 1 1 0 2 2 2 1 Cyclin, N-terminal domain HD_4 PF13328.6 BAJ50808.1 - 0.012 15.3 3.2 0.72 9.6 0.4 3.0 1 1 2 3 3 3 0 HD domain YqhR PF11085.8 BAJ50809.1 - 0.0091 15.9 4.5 0.011 15.7 4.5 1.2 1 0 0 1 1 1 1 Conserved membrane protein YqhR RTX PF02382.15 BAJ50809.1 - 1.3 8.7 4.6 0.57 9.8 2.5 1.5 1 1 1 2 2 2 0 N-terminal domain in RTX protein PMP22_Claudin PF00822.20 BAJ50809.1 - 5.7 6.8 7.3 0.78 9.6 2.7 1.8 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin family DUF87 PF01935.17 BAJ50810.1 - 3.7e-08 33.7 0.4 7.3e-08 32.8 0.4 1.5 1 1 0 1 1 1 1 Helicase HerA, central domain AAA PF00004.29 BAJ50810.1 - 2.5e-05 24.7 0.0 0.01 16.3 0.0 2.4 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.7 BAJ50810.1 - 0.0024 16.9 0.0 0.0068 15.4 0.0 1.6 2 0 0 2 2 2 1 AAA-like domain ResIII PF04851.15 BAJ50810.1 - 0.0025 17.8 0.1 2.3 8.2 0.0 2.2 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit TrwB_AAD_bind PF10412.9 BAJ50810.1 - 0.0027 16.7 0.0 0.0045 16.0 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_14 PF13173.6 BAJ50810.1 - 0.0051 16.9 0.0 0.8 9.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 BAJ50810.1 - 0.006 16.0 0.1 0.019 14.3 0.1 1.8 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_16 PF13191.6 BAJ50810.1 - 0.012 16.0 0.4 0.11 12.9 0.4 2.1 1 1 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 BAJ50810.1 - 0.021 14.4 0.1 0.36 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 BAJ50810.1 - 0.054 13.8 0.2 1.6 9.0 0.2 2.5 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 BAJ50810.1 - 0.056 12.5 0.0 0.099 11.7 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF2075 PF09848.9 BAJ50810.1 - 0.057 12.7 0.0 0.12 11.6 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_29 PF13555.6 BAJ50810.1 - 0.08 12.7 0.7 0.19 11.5 0.7 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 BAJ50810.1 - 0.083 12.4 0.1 0.18 11.3 0.1 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region CbiA PF01656.23 BAJ50810.1 - 0.095 12.8 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Viral_helicase1 PF01443.18 BAJ50810.1 - 0.12 12.1 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Pox_A32 PF04665.12 BAJ50810.1 - 0.12 11.8 0.2 0.25 10.8 0.2 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_19 PF13245.6 BAJ50810.1 - 0.13 12.6 0.0 0.4 11.0 0.0 1.8 1 1 0 1 1 1 0 AAA domain UvrD-helicase PF00580.21 BAJ50810.1 - 0.16 11.5 1.4 1.1 8.7 0.7 2.0 1 1 1 2 2 2 0 UvrD/REP helicase N-terminal domain ABC_tran PF00005.27 BAJ50810.1 - 0.16 12.4 0.1 0.32 11.5 0.1 1.5 1 1 0 1 1 1 0 ABC transporter NurA PF09376.10 BAJ50811.1 - 3.1e-21 76.2 0.0 4.8e-21 75.6 0.0 1.2 1 0 0 1 1 1 1 NurA domain DnaJ PF00226.31 BAJ50812.1 - 2.1e-22 79.0 0.4 3.4e-22 78.3 0.4 1.4 1 0 0 1 1 1 1 DnaJ domain DUF1294 PF06961.13 BAJ50812.1 - 5.5e-18 65.0 2.0 1.7e-17 63.4 2.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF1294) Romo1 PF10247.9 BAJ50812.1 - 0.067 13.6 7.1 4.6 7.7 0.1 3.5 3 0 0 3 3 3 0 Reactive mitochondrial oxygen species modulator 1 YqzM PF14141.6 BAJ50812.1 - 0.14 12.2 2.3 0.4 10.8 2.3 1.7 1 0 0 1 1 1 0 YqzM-like protein SID-1_RNA_chan PF13965.6 BAJ50812.1 - 0.89 7.9 5.4 0.063 11.7 0.3 1.6 2 0 0 2 2 2 0 dsRNA-gated channel SID-1 CPP1-like PF11833.8 BAJ50812.1 - 1.3 8.7 8.7 12 5.5 4.6 2.8 3 0 0 3 3 3 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF4325 PF14213.6 BAJ50813.1 - 1.8e-08 33.9 0.0 4.3e-08 32.8 0.0 1.7 2 0 0 2 2 2 1 STAS-like domain of unknown function (DUF4325) STAS_2 PF13466.6 BAJ50813.1 - 0.021 15.2 0.0 0.058 13.7 0.0 1.7 1 1 0 1 1 1 0 STAS domain DUF2157 PF09925.9 BAJ50815.1 - 0.021 14.6 0.5 0.029 14.2 0.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) zinc_ribbon_2 PF13240.6 BAJ50816.1 - 0.00047 19.8 1.2 0.0038 16.9 1.2 2.1 1 1 0 1 1 1 1 zinc-ribbon domain zf-NADH-PPase PF09297.11 BAJ50816.1 - 0.00056 19.5 1.1 0.0023 17.6 1.2 1.8 1 1 1 2 2 2 2 NADH pyrophosphatase zinc ribbon domain TF_Zn_Ribbon PF08271.12 BAJ50816.1 - 0.003 17.0 1.4 0.006 16.1 1.4 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Zn_ribbon_SprT PF17283.2 BAJ50816.1 - 0.0035 17.2 0.0 0.007 16.3 0.0 1.5 1 0 0 1 1 1 1 SprT-like zinc ribbon domain DZR PF12773.7 BAJ50816.1 - 0.0064 16.5 0.4 0.011 15.8 0.4 1.4 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 BAJ50816.1 - 0.0094 15.3 5.0 0.035 13.5 5.0 1.8 1 1 0 1 1 1 1 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 BAJ50816.1 - 0.013 15.4 0.9 0.027 14.4 0.9 1.5 1 0 0 1 1 1 0 PhnA Zinc-Ribbon DNA_RNApol_7kD PF03604.13 BAJ50816.1 - 0.025 14.3 0.4 0.3 10.8 0.7 2.2 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit IBR PF01485.21 BAJ50816.1 - 0.032 14.5 0.2 0.051 13.8 0.2 1.3 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Nudix_N_2 PF14803.6 BAJ50816.1 - 0.035 14.0 1.0 0.59 10.1 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal Prok-RING_1 PF14446.6 BAJ50816.1 - 0.061 13.3 0.5 0.11 12.5 0.5 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DNA_ligase_ZBD PF03119.16 BAJ50816.1 - 0.17 12.0 3.2 0.22 11.6 1.2 2.1 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Abhydrolase_6 PF12697.7 BAJ50818.1 - 6.6e-13 49.8 1.8 7.8e-13 49.5 1.8 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 BAJ50818.1 - 4.9e-05 23.1 0.0 8.2e-05 22.4 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold ANAPC4 PF12896.7 BAJ50818.1 - 0.081 12.4 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 RHH_1 PF01402.21 BAJ50819.1 - 0.39 10.7 8.0 0.28 11.2 0.9 3.3 2 2 1 3 3 3 0 Ribbon-helix-helix protein, copG family PIN PF01850.21 BAJ50820.1 - 1.7e-10 41.5 0.5 2e-10 41.2 0.5 1.0 1 0 0 1 1 1 1 PIN domain PIN_2 PF10130.9 BAJ50820.1 - 0.0022 18.2 0.0 0.0027 17.9 0.0 1.2 1 0 0 1 1 1 1 PIN domain Meth_synt_2 PF01717.18 BAJ50821.1 - 1.4e-09 37.7 0.0 1.5e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain S_layer_C PF05124.12 BAJ50821.1 - 0.019 15.0 0.0 0.021 14.8 0.0 1.0 1 0 0 1 1 1 0 S-layer like family, C-terminal region OsmC PF02566.19 BAJ50822.1 - 0.00039 20.9 0.0 0.0004 20.8 0.0 1.1 1 0 0 1 1 1 1 OsmC-like protein HEPN PF05168.14 BAJ50823.1 - 8.2e-31 106.6 0.1 8.9e-31 106.5 0.1 1.0 1 0 0 1 1 1 1 HEPN domain TAtT PF16811.5 BAJ50823.1 - 0.047 13.0 0.7 0.32 10.3 0.1 1.9 2 0 0 2 2 2 0 TRAP transporter T-component DUF1679 PF07914.11 BAJ50823.1 - 0.2 10.5 0.0 0.22 10.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) NTP_transf_2 PF01909.23 BAJ50824.1 - 1.5e-10 41.2 0.1 1.9e-10 40.9 0.1 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ50824.1 - 1.8e-08 34.3 0.1 2.3e-08 34.0 0.1 1.4 1 1 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase HTH_24 PF13412.6 BAJ50824.1 - 0.036 13.6 0.1 3 7.5 0.0 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF294 PF03445.13 BAJ50824.1 - 0.16 11.7 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 Methyltransf_25 PF13649.6 BAJ50825.1 - 9.8e-26 90.3 0.0 7.9e-25 87.4 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Dala_Dala_lig_C PF07478.13 BAJ50825.1 - 1.1e-23 83.8 0.0 1.6e-23 83.3 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Methyltransf_11 PF08241.12 BAJ50825.1 - 1.8e-20 73.4 0.0 3.8e-20 72.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAJ50825.1 - 1e-17 64.3 0.0 1.7e-17 63.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 BAJ50825.1 - 2.8e-14 53.0 0.0 5.8e-14 52.0 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 BAJ50825.1 - 2.9e-11 43.5 0.0 7.8e-11 42.1 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAJ50825.1 - 3.2e-09 37.4 0.0 8e-09 36.2 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain MTS PF05175.14 BAJ50825.1 - 2.4e-07 30.5 0.0 4e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain ATP-grasp_3 PF02655.14 BAJ50825.1 - 4.4e-06 26.8 0.0 1.1e-05 25.6 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain TehB PF03848.14 BAJ50825.1 - 6.3e-05 22.5 0.0 0.00011 21.6 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB ATP-grasp_4 PF13535.6 BAJ50825.1 - 0.00011 21.9 0.0 0.00021 21.0 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain Methyltransf_9 PF08003.11 BAJ50825.1 - 0.00066 18.7 0.0 0.0011 18.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) CMAS PF02353.20 BAJ50825.1 - 0.0018 17.6 0.0 0.0028 17.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Cons_hypoth95 PF03602.15 BAJ50825.1 - 0.0058 16.3 0.0 0.014 15.1 0.0 1.5 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 BAJ50825.1 - 0.0079 15.8 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PCMT PF01135.19 BAJ50825.1 - 0.013 15.3 0.0 0.023 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) ATPgrasp_Ter PF15632.6 BAJ50825.1 - 0.046 13.5 0.0 2.8 7.7 0.0 2.9 3 0 0 3 3 3 0 ATP-grasp in the biosynthetic pathway with Ter operon GARS_A PF01071.19 BAJ50825.1 - 0.052 13.3 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPSase_L_D2 PF02786.17 BAJ50825.1 - 0.057 12.9 0.0 0.11 11.9 0.0 1.5 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain tRNA_U5-meth_tr PF05958.11 BAJ50825.1 - 0.097 11.6 0.0 0.15 11.0 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase UPF0020 PF01170.18 BAJ50825.1 - 0.1 12.3 0.0 0.87 9.2 0.0 2.2 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 PrmA PF06325.13 BAJ50825.1 - 0.11 11.9 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 BAJ50825.1 - 0.16 11.4 0.0 0.32 10.4 0.0 1.5 1 0 0 1 1 1 0 Putative methyltransferase NTP_transf_2 PF01909.23 BAJ50826.1 - 2.6e-11 43.6 0.1 3.8e-11 43.1 0.1 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ50826.1 - 2.2e-07 30.9 0.0 2.8e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 BAJ50826.1 - 0.083 13.1 0.0 0.098 12.9 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase beta palm HEPN PF05168.14 BAJ50827.1 - 1.1e-23 83.5 0.1 1.4e-23 83.2 0.1 1.1 1 0 0 1 1 1 1 HEPN domain DUF884 PF05959.11 BAJ50827.1 - 0.02 14.5 0.0 0.025 14.2 0.0 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF884) DUF2384 PF09722.10 BAJ50827.1 - 0.12 12.4 0.4 0.67 10.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2384) Diphthami_syn_2 PF01902.17 BAJ50828.1 - 1e-35 123.2 0.0 1.3e-35 122.9 0.0 1.0 1 0 0 1 1 1 1 Diphthamide synthase Nitrate_red_del PF02613.15 BAJ50829.1 - 5.4e-19 68.6 0.2 5.7e-18 65.2 0.2 1.9 1 1 1 2 2 2 1 Nitrate reductase delta subunit EB_dh PF09459.10 BAJ50830.1 - 4.6e-20 72.7 0.5 2.8e-19 70.1 0.5 2.0 1 1 0 1 1 1 1 Ethylbenzene dehydrogenase Fer4_11 PF13247.6 BAJ50831.1 - 9.6e-31 105.9 5.9 9.6e-31 105.9 5.9 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 BAJ50831.1 - 3.9e-05 24.2 18.8 0.023 15.3 0.2 3.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ50831.1 - 5.8e-05 23.2 17.9 0.016 15.4 0.6 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ50831.1 - 9.5e-05 22.4 23.1 0.0081 16.2 0.8 3.4 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 BAJ50831.1 - 0.00049 20.0 29.1 0.00078 19.4 4.1 4.5 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 BAJ50831.1 - 0.0018 18.3 0.7 0.0018 18.3 0.7 3.3 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4 PF00037.27 BAJ50831.1 - 0.0054 16.5 2.5 0.0054 16.5 2.5 4.3 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_6 PF12837.7 BAJ50831.1 - 0.007 16.4 27.4 0.015 15.4 3.0 4.7 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_15 PF13459.6 BAJ50831.1 - 0.015 16.0 5.9 1.2 9.9 0.9 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 BAJ50831.1 - 0.13 12.8 0.6 0.13 12.8 0.6 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 BAJ50831.1 - 0.17 12.3 0.1 0.17 12.3 0.1 3.6 2 1 0 2 2 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 BAJ50831.1 - 0.24 12.0 20.5 0.46 11.1 0.2 3.5 2 1 0 2 2 2 0 4Fe-4S dicluster domain Molybdopterin PF00384.22 BAJ50832.1 - 9.9e-17 61.0 0.0 1.5e-16 60.4 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 BAJ50832.1 - 0.00091 19.2 0.1 0.052 13.6 0.0 2.7 3 0 0 3 3 3 1 Molydopterin dinucleotide binding domain Molybdopterin PF00384.22 BAJ50833.1 - 1.3e-21 77.1 0.0 1.4e-18 67.1 0.0 2.1 2 0 0 2 2 2 2 Molybdopterin oxidoreductase HTH_10 PF04967.12 BAJ50834.1 - 2.6e-17 62.3 0.1 4.1e-17 61.7 0.1 1.3 1 0 0 1 1 1 1 HTH DNA binding domain HTH_24 PF13412.6 BAJ50834.1 - 0.12 11.9 0.0 0.48 10.0 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_DeoR PF08220.12 BAJ50834.1 - 0.13 12.1 0.0 0.32 10.8 0.0 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Pyr_redox_2 PF07992.14 BAJ50835.1 - 8.7e-62 209.0 0.1 1.2e-61 208.6 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 BAJ50835.1 - 8.2e-20 71.1 0.0 2e-19 69.9 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 BAJ50835.1 - 6.7e-16 58.6 3.0 1.8e-14 54.0 0.2 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 BAJ50835.1 - 2.3e-12 46.8 1.4 2.6e-10 40.0 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 BAJ50835.1 - 3e-08 33.2 0.6 2.8e-06 26.7 0.0 3.4 2 1 2 4 4 4 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 BAJ50835.1 - 0.0002 21.5 0.2 1.1 9.5 0.0 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 BAJ50835.1 - 0.00071 18.4 4.6 0.22 10.2 0.1 2.9 3 1 1 4 4 4 2 HI0933-like protein NAD_binding_9 PF13454.6 BAJ50835.1 - 0.0038 17.2 0.5 0.77 9.7 0.0 2.8 3 0 0 3 3 3 1 FAD-NAD(P)-binding FAD_oxidored PF12831.7 BAJ50835.1 - 0.0047 16.3 0.1 0.07 12.5 0.0 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.24 BAJ50835.1 - 0.014 15.0 0.1 2.8 7.4 0.0 2.5 2 0 0 2 2 2 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 BAJ50835.1 - 0.044 13.1 0.2 8.3 5.6 0.0 2.4 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 BAJ50835.1 - 0.046 12.8 6.6 0.15 11.1 1.1 3.4 2 1 2 4 4 4 0 FAD binding domain P2 PF07194.11 BAJ50835.1 - 0.05 13.7 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 P2 response regulator binding domain 3HCDH_N PF02737.18 BAJ50835.1 - 0.057 13.3 0.2 0.13 12.1 0.1 1.6 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Trp_halogenase PF04820.14 BAJ50835.1 - 0.059 12.2 0.4 0.098 11.5 0.4 1.3 1 0 0 1 1 1 0 Tryptophan halogenase Lycopene_cycl PF05834.12 BAJ50835.1 - 0.28 10.2 4.5 8.3 5.3 0.4 2.9 2 1 1 3 3 3 0 Lycopene cyclase protein HxlR PF01638.17 BAJ50836.1 - 6.8e-22 77.1 0.2 1.1e-21 76.5 0.2 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_9 PF08221.11 BAJ50836.1 - 0.0086 16.2 0.1 0.025 14.7 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain PadR PF03551.14 BAJ50836.1 - 0.018 15.0 0.1 0.027 14.4 0.1 1.4 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family RepL PF05732.11 BAJ50836.1 - 0.033 13.6 0.0 0.042 13.3 0.0 1.2 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) MarR PF01047.22 BAJ50836.1 - 0.039 13.9 0.0 0.062 13.2 0.0 1.3 1 0 0 1 1 1 0 MarR family NurA PF09376.10 BAJ50837.1 - 3.2e-16 59.8 0.1 4.8e-16 59.2 0.1 1.3 1 0 0 1 1 1 1 NurA domain DUF87 PF01935.17 BAJ50838.1 - 7.5e-39 134.2 0.0 1.3e-38 133.4 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_10 PF12846.7 BAJ50838.1 - 2.4e-07 30.0 0.0 3.9e-05 22.7 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain TrwB_AAD_bind PF10412.9 BAJ50838.1 - 0.00012 21.1 0.0 0.0085 15.0 0.0 2.3 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 BAJ50838.1 - 0.00019 21.7 0.0 0.036 14.3 0.0 2.7 2 2 0 2 2 2 1 AAA domain DUF853 PF05872.12 BAJ50838.1 - 0.00021 20.0 0.0 0.048 12.3 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) Zot PF05707.12 BAJ50838.1 - 0.00031 20.4 0.0 0.00074 19.2 0.0 1.6 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) T4SS-DNA_transf PF02534.14 BAJ50838.1 - 0.0023 16.8 0.0 0.0031 16.4 0.0 1.2 1 0 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer ResIII PF04851.15 BAJ50838.1 - 0.015 15.3 0.0 0.17 11.9 0.0 2.2 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit FtsK_SpoIIIE PF01580.18 BAJ50838.1 - 0.029 13.7 0.0 0.78 9.0 0.0 2.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family Helicase_RecD PF05127.14 BAJ50838.1 - 0.11 12.3 0.0 0.22 11.3 0.0 1.6 1 0 0 1 1 1 0 Helicase Metallophos_2 PF12850.7 BAJ50839.1 - 1.1e-13 51.7 0.5 3.3e-13 50.2 0.5 2.0 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 BAJ50839.1 - 8.4e-12 46.0 0.2 1.6e-11 45.1 0.2 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 BAJ50839.1 - 0.0016 17.8 0.3 2.9 7.2 0.0 3.6 3 1 1 4 4 4 2 Metallophosphoesterase, calcineurin superfamily Homeodomain PF00046.29 BAJ50839.1 - 0.011 15.6 1.0 0.083 12.8 0.4 2.4 2 0 0 2 2 2 0 Homeodomain DUF4088 PF13317.6 BAJ50839.1 - 0.013 15.1 0.0 0.048 13.2 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4088) AAA_23 PF13476.6 BAJ50840.1 - 2.9e-13 50.8 56.5 1.1e-12 48.8 35.3 4.2 2 2 0 2 2 2 1 AAA domain SMC_N PF02463.19 BAJ50840.1 - 1.1e-12 47.9 0.0 5.8e-12 45.5 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 BAJ50840.1 - 1.1e-06 28.2 0.0 2.1e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 BAJ50840.1 - 2.8e-05 24.2 0.1 0.00012 22.3 0.0 2.1 2 0 0 2 2 1 1 Putative exonuclease SbcCD, C subunit AAA_27 PF13514.6 BAJ50840.1 - 0.00014 21.5 0.0 0.00014 21.5 0.0 4.1 4 1 2 6 6 6 1 AAA domain DUF1290 PF06947.12 BAJ50840.1 - 0.0063 16.6 1.4 0.017 15.2 1.4 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1290) AAA_15 PF13175.6 BAJ50840.1 - 0.023 14.4 24.8 0.02 14.6 20.6 2.7 2 1 0 2 2 2 0 AAA ATPase domain Egg_lysin PF01303.17 BAJ50840.1 - 0.13 12.5 1.4 8.3 6.7 0.0 2.6 2 0 0 2 2 2 0 Egg lysin (Sperm-lysin) FlaC_arch PF05377.11 BAJ50840.1 - 0.33 11.4 23.3 11 6.5 0.0 7.5 4 2 3 7 7 7 0 Flagella accessory protein C (FlaC) DUF5339 PF17274.2 BAJ50840.1 - 0.38 11.6 8.8 0.13 13.2 0.6 3.5 2 1 1 3 3 3 0 Family of unknown function (DUF5339) RskA PF10099.9 BAJ50840.1 - 0.67 10.2 4.0 0.29 11.4 0.5 2.1 2 0 0 2 2 2 0 Anti-sigma-K factor rskA AAA_21 PF13304.6 BAJ50840.1 - 1.2 8.9 7.1 0.34 10.7 0.3 3.0 2 1 1 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system MSA-2c PF12238.8 BAJ50840.1 - 1.3 9.0 3.4 2.5 8.1 3.4 1.4 1 0 0 1 1 1 0 Merozoite surface antigen 2c Fib_alpha PF08702.10 BAJ50840.1 - 1.7 8.8 30.7 0.52 10.5 0.6 4.2 3 2 0 3 3 3 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 BAJ50840.1 - 3.5 6.4 54.5 0.0087 15.0 9.3 3.4 3 1 1 4 4 4 0 Spc7 kinetochore protein FAA_hydrolase_N PF09298.11 BAJ50840.1 - 3.6 7.8 15.2 13 6.0 0.3 5.0 4 2 1 5 5 5 0 Fumarylacetoacetase N-terminal V-SNARE_C PF12352.8 BAJ50840.1 - 3.8 7.9 12.6 34 4.8 0.0 5.2 5 0 0 5 5 5 0 Snare region anchored in the vesicle membrane C-terminus Peptidase_S46 PF10459.9 BAJ50840.1 - 4.4 5.8 22.8 1.9 7.0 11.3 2.9 2 1 0 3 3 3 0 Peptidase S46 Phage_tail_APC PF16778.5 BAJ50840.1 - 4.9 7.1 6.8 2.4 8.1 0.2 3.3 3 0 0 3 3 3 0 Phage tail assembly chaperone protein T3SSipB PF16535.5 BAJ50840.1 - 8.5 6.8 16.5 1.1 9.7 0.3 4.0 3 1 0 3 3 3 0 Type III cell invasion protein SipB HD PF01966.22 BAJ50841.1 - 4.9e-06 26.8 2.2 7e-06 26.3 2.2 1.6 1 1 0 1 1 1 1 HD domain HD_6 PF18019.1 BAJ50841.1 - 0.00016 21.8 0.3 0.0002 21.6 0.3 1.2 1 0 0 1 1 1 1 HD domain Helicase_C PF00271.31 BAJ50842.1 - 3.3e-13 49.9 0.0 6.5e-13 49.0 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 BAJ50842.1 - 2e-05 24.5 0.7 0.0013 18.5 0.0 3.3 3 1 0 3 3 3 1 DEAD/DEAH box helicase CagS PF16707.5 BAJ50842.1 - 0.036 14.1 0.2 0.066 13.2 0.2 1.4 1 0 0 1 1 1 0 Cag pathogenicity island protein S of Helicobacter pylori Glyco_transf_21 PF13506.6 BAJ50842.1 - 0.15 11.5 0.1 0.4 10.1 0.1 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 21 Sulfotransfer_1 PF00685.27 BAJ50844.1 - 0.058 12.9 0.0 0.061 12.8 0.0 1.1 1 0 0 1 1 1 0 Sulfotransferase domain Melibiase_2 PF16499.5 BAJ50844.1 - 0.075 12.2 0.0 0.09 11.9 0.0 1.0 1 0 0 1 1 1 0 Alpha galactosidase A DUF3764 PF12594.8 BAJ50845.1 - 0.00023 21.2 0.1 0.0016 18.4 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3764) Cas_Cas5d PF09704.10 BAJ50845.1 - 0.00084 19.3 0.0 0.0017 18.3 0.0 1.5 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DevR PF01905.16 BAJ50846.1 - 4.2e-66 222.8 0.0 6.1e-66 222.2 0.0 1.2 1 0 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 Cas_Csa5 PF09702.10 BAJ50847.1 - 5.4e-08 33.0 1.3 0.0021 18.3 0.2 2.2 1 1 1 2 2 2 2 CRISPR-associated protein (Cas_Csa5) HTH_IclR PF09339.10 BAJ50848.1 - 0.0024 17.6 0.2 0.0063 16.3 0.2 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF1887 PF09002.11 BAJ50848.1 - 0.0075 15.0 0.0 0.0097 14.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1887) HTH_20 PF12840.7 BAJ50848.1 - 0.01 15.9 0.1 0.019 15.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Cas_NE0113 PF09623.10 BAJ50848.1 - 0.012 15.3 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) HTH_27 PF13463.6 BAJ50848.1 - 0.05 14.1 0.2 0.16 12.5 0.2 1.9 1 0 0 1 1 1 0 Winged helix DNA-binding domain Cas_APE2256 PF09651.10 BAJ50848.1 - 0.13 12.2 0.1 0.26 11.2 0.1 1.7 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_APE2256) TrmB PF01978.19 BAJ50848.1 - 0.13 12.1 0.9 0.45 10.4 0.2 2.2 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB CRISPR_Cas6 PF10040.9 BAJ50849.1 - 2.2e-13 50.6 2.1 1.2e-12 48.2 1.5 2.4 2 1 0 2 2 2 1 CRISPR-associated endoribonuclease Cas6 Cas_Cas1 PF01867.16 BAJ50850.1 - 4.4e-56 190.1 0.0 5.7e-56 189.7 0.0 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 CRISPR_Cas2 PF09827.9 BAJ50851.1 - 3.6e-14 52.7 0.0 4.2e-14 52.5 0.0 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Cas_Cas4 PF01930.17 BAJ50852.1 - 6.2e-14 52.4 0.0 8.1e-14 52.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 BAJ50852.1 - 6.8e-07 29.4 0.0 8.2e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily RAMPs PF03787.15 BAJ50853.1 - 9.1e-12 45.5 0.0 1.8e-11 44.5 0.0 1.5 1 1 0 1 1 1 1 RAMP superfamily MaoC_dehydratas PF01575.19 BAJ50853.1 - 0.11 12.1 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 MaoC like domain RAMPs PF03787.15 BAJ50854.1 - 0.00029 20.9 0.0 0.0033 17.5 0.0 2.0 1 1 0 1 1 1 1 RAMP superfamily RAMPs PF03787.15 BAJ50855.1 - 1.2e-08 35.2 0.0 2.6e-08 34.2 0.0 1.4 1 1 0 1 1 1 1 RAMP superfamily HD PF01966.22 BAJ50856.1 - 5.5e-09 36.3 0.3 1.2e-08 35.2 0.3 1.5 1 0 0 1 1 1 1 HD domain DUF3692 PF12469.8 BAJ50856.1 - 0.0042 17.3 0.0 0.022 14.9 0.0 2.3 1 1 0 1 1 1 1 CRISPR-associated protein RAMPs PF03787.15 BAJ50857.1 - 1.9e-08 34.6 0.0 4.2e-08 33.5 0.0 1.4 1 1 0 1 1 1 1 RAMP superfamily RAMPs PF03787.15 BAJ50858.1 - 1.3e-24 87.4 0.0 2.3e-24 86.6 0.0 1.3 1 0 0 1 1 1 1 RAMP superfamily Cas_Cmr3 PF09700.10 BAJ50858.1 - 0.083 12.3 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr3) RAMPs PF03787.15 BAJ50859.1 - 1.3e-23 84.2 0.0 2.4e-23 83.3 0.0 1.5 1 1 0 1 1 1 1 RAMP superfamily Cas_DxTHG PF09455.10 BAJ50861.1 - 1.2e-09 38.2 0.0 1.6e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 CRISPR-associated (Cas) DxTHG family PSY3 PF16836.5 BAJ50861.1 - 0.073 12.6 0.1 0.19 11.3 0.1 1.6 2 0 0 2 2 2 0 Shu complex component Psy3, DNA-binding description Sua5_yciO_yrdC PF01300.18 BAJ50862.1 - 0.00078 19.0 0.0 0.00093 18.7 0.0 1.1 1 0 0 1 1 1 1 Telomere recombination TMP-TENI PF02581.17 BAJ50863.1 - 2.6e-46 157.2 0.1 3e-46 157.0 0.1 1.0 1 0 0 1 1 1 1 Thiamine monophosphate synthase NMO PF03060.15 BAJ50863.1 - 0.00078 18.9 1.4 0.001 18.5 1.4 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase NanE PF04131.14 BAJ50863.1 - 0.0011 18.1 0.1 0.0022 17.2 0.1 1.5 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 BAJ50863.1 - 0.004 16.7 0.1 0.0052 16.3 0.1 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein DUF561 PF04481.12 BAJ50863.1 - 0.0042 16.3 0.1 0.011 14.9 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF561) DHO_dh PF01180.21 BAJ50863.1 - 0.023 13.9 0.1 0.031 13.5 0.1 1.3 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase Dus PF01207.17 BAJ50863.1 - 0.034 13.2 0.0 0.1 11.6 0.0 1.7 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) FMN_dh PF01070.18 BAJ50863.1 - 0.036 13.1 0.6 0.055 12.5 0.6 1.4 1 1 0 1 1 1 0 FMN-dependent dehydrogenase DUF1422 PF07226.11 BAJ50863.1 - 0.15 12.0 0.0 1.6 8.8 0.0 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1422) ThiG PF05690.14 BAJ50864.1 - 1.4e-101 339.0 0.7 1.5e-101 338.8 0.7 1.0 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 BAJ50864.1 - 0.0011 18.4 0.1 0.002 17.7 0.1 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein FMN_dh PF01070.18 BAJ50864.1 - 0.0033 16.5 0.6 0.0049 16.0 0.6 1.3 1 0 0 1 1 1 1 FMN-dependent dehydrogenase DUF561 PF04481.12 BAJ50864.1 - 0.015 14.5 0.5 0.027 13.7 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) IMPDH PF00478.25 BAJ50864.1 - 0.017 14.1 1.3 0.026 13.5 1.3 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Dus PF01207.17 BAJ50864.1 - 0.04 13.0 0.6 0.086 11.9 0.6 1.5 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) NMO PF03060.15 BAJ50864.1 - 0.095 12.1 1.5 0.14 11.6 1.5 1.2 1 0 0 1 1 1 0 Nitronate monooxygenase NanE PF04131.14 BAJ50864.1 - 0.098 11.8 1.1 1.4 8.1 0.4 2.1 1 1 1 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Hydrolase_like PF13242.6 BAJ50864.1 - 0.11 12.6 0.1 0.44 10.6 0.1 2.0 2 0 0 2 2 2 0 HAD-hyrolase-like ThiS PF02597.20 BAJ50865.1 - 5.9e-14 52.5 0.3 7.1e-14 52.2 0.3 1.1 1 0 0 1 1 1 1 ThiS family Lambda_tail_I PF06805.12 BAJ50865.1 - 0.00014 22.1 1.4 0.00042 20.6 1.4 1.7 1 1 0 1 1 1 1 Bacteriophage lambda tail assembly protein I DUF2635 PF10948.8 BAJ50865.1 - 0.0091 15.7 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2635) CobN-Mg_chel PF02514.16 BAJ50865.1 - 0.023 12.4 0.2 0.024 12.4 0.2 1.0 1 0 0 1 1 1 0 CobN/Magnesium Chelatase TGS PF02824.21 BAJ50865.1 - 0.076 13.1 0.1 0.12 12.4 0.1 1.5 1 1 0 1 1 1 0 TGS domain Thioredoxin_5 PF13743.6 BAJ50866.1 - 2e-36 125.4 0.0 2.8e-36 124.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 BAJ50866.1 - 3.3e-15 56.4 0.7 3.6e-14 53.0 0.1 2.5 2 1 0 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 BAJ50866.1 - 4.4e-05 23.7 0.0 0.0053 16.9 0.0 2.3 1 1 0 1 1 1 1 Thioredoxin TrmB PF01978.19 BAJ50866.1 - 0.0016 18.3 0.0 0.0042 16.9 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Thioredoxin PF00085.20 BAJ50866.1 - 0.011 15.7 0.0 0.89 9.6 0.1 2.4 2 0 0 2 2 2 0 Thioredoxin Penicillinase_R PF03965.16 BAJ50866.1 - 0.014 15.8 0.1 0.035 14.5 0.1 1.6 1 0 0 1 1 1 0 Penicillinase repressor DSBA PF01323.20 BAJ50867.1 - 1.2e-21 77.4 0.4 3.9e-21 75.7 0.4 1.7 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_5 PF13743.6 BAJ50867.1 - 1.1e-17 64.4 0.0 1.6e-17 63.8 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_4 PF13462.6 BAJ50867.1 - 1.3e-07 32.0 0.1 0.00012 22.3 0.0 2.3 1 1 0 2 2 2 2 Thioredoxin Thioredoxin_3 PF13192.6 BAJ50867.1 - 0.00078 19.5 0.1 0.0023 18.0 0.0 1.9 2 0 0 2 2 2 1 Thioredoxin domain DUF1525 PF07511.11 BAJ50867.1 - 0.13 12.4 0.1 0.25 11.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1525) HypA PF01155.19 BAJ50869.1 - 2.2e-18 66.3 0.1 2.6e-18 66.1 0.1 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 BAJ50869.1 - 0.00031 20.2 0.9 0.033 13.7 0.3 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding DUF5402 PF17393.2 BAJ50869.1 - 0.017 15.0 1.2 0.027 14.4 0.3 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5402) Lar_restr_allev PF14354.6 BAJ50869.1 - 0.029 14.7 0.0 1.7 9.1 0.0 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar Nudix_N_2 PF14803.6 BAJ50869.1 - 0.075 13.0 2.3 0.25 11.3 0.2 2.2 2 0 0 2 2 2 0 Nudix N-terminal ParA PF10609.9 BAJ50870.1 - 2.8e-52 177.6 0.3 1.5e-51 175.2 0.3 1.8 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 BAJ50870.1 - 4.1e-12 46.3 0.1 7e-12 45.5 0.1 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 BAJ50870.1 - 6.2e-07 28.9 0.9 2.3e-05 23.8 0.4 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_31 PF13614.6 BAJ50870.1 - 2.3e-05 24.4 0.4 0.0013 18.7 0.1 2.2 1 1 1 2 2 2 1 AAA domain MipZ PF09140.11 BAJ50870.1 - 5.8e-05 22.5 0.1 0.00018 20.9 0.1 1.8 1 1 0 1 1 1 1 ATPase MipZ YopE_N PF09020.10 BAJ50870.1 - 0.012 15.9 0.0 0.021 15.0 0.0 1.4 1 0 0 1 1 1 0 YopE, N terminal AAA_25 PF13481.6 BAJ50870.1 - 0.075 12.6 0.3 0.13 11.8 0.3 1.5 1 1 0 1 1 1 0 AAA domain Fer4_NifH PF00142.18 BAJ50870.1 - 0.091 12.2 0.1 3.1 7.2 0.0 2.1 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_26 PF13500.6 BAJ50870.1 - 0.12 12.2 0.8 2.1 8.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 BAJ50870.1 - 0.22 10.7 0.1 0.35 10.0 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain Fer4_22 PF17179.4 BAJ50871.1 - 3.6e-34 117.5 7.8 3.6e-34 117.5 7.8 2.2 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 BAJ50871.1 - 2.5e-07 31.1 5.5 0.0079 16.7 0.1 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 BAJ50871.1 - 2.8e-07 31.0 9.3 0.0069 17.0 0.1 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 BAJ50871.1 - 2.9e-07 30.2 12.7 0.00078 19.4 4.1 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 BAJ50871.1 - 4.2e-07 30.3 18.5 2.4e-06 27.9 7.6 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ50871.1 - 1e-06 28.8 8.0 0.0082 16.3 0.1 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ50871.1 - 1.7e-06 28.0 11.6 0.0051 16.9 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 BAJ50871.1 - 2.4e-05 24.5 5.0 0.0038 17.4 0.0 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 BAJ50871.1 - 0.00011 23.0 9.3 0.058 14.3 1.1 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 BAJ50871.1 - 0.00039 20.5 13.2 0.036 14.2 0.7 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 BAJ50871.1 - 0.00057 19.6 18.8 0.008 16.0 3.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 BAJ50871.1 - 0.0049 16.9 19.6 0.3 11.2 4.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 BAJ50871.1 - 0.0093 16.4 17.0 0.31 11.7 1.3 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 BAJ50871.1 - 0.027 15.4 4.2 0.027 15.4 4.2 2.9 2 0 0 2 2 2 0 4Fe-4S binding domain Sigma70_r3 PF04539.16 BAJ50871.1 - 0.058 13.5 0.4 0.13 12.4 0.4 1.5 1 0 0 1 1 1 0 Sigma-70 region 3 Fer4_13 PF13370.6 BAJ50871.1 - 0.16 12.5 12.4 1.6 9.4 5.5 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_20 PF14691.6 BAJ50871.1 - 1.2 8.9 11.2 2 8.2 0.3 2.5 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_15 PF13459.6 BAJ50871.1 - 6.7 7.5 10.2 33 5.3 3.1 2.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain cNMP_binding PF00027.29 BAJ50872.1 - 3.6e-13 49.4 0.0 5.3e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain NAD_binding_1 PF00175.21 BAJ50873.1 - 9.4e-18 64.9 0.0 1.6e-17 64.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.9 BAJ50873.1 - 1.6e-10 40.6 2.1 3.5e-10 39.5 2.1 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_6 PF08030.12 BAJ50873.1 - 0.0038 17.4 0.4 0.01 16.0 0.0 1.9 3 0 0 3 3 3 1 Ferric reductase NAD binding domain FAD_binding_6 PF00970.24 BAJ50873.1 - 0.0056 17.0 0.0 0.016 15.5 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain Oxidored_q6 PF01058.22 BAJ50874.1 - 2.7e-24 85.5 0.0 3.8e-24 85.0 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFeSe_Hases PF00374.19 BAJ50875.1 - 3.5e-27 95.5 0.2 1.1e-14 54.3 0.1 3.3 1 1 2 3 3 3 3 Nickel-dependent hydrogenase DUF3236 PF11576.8 BAJ50875.1 - 0.2 11.4 0.0 0.53 10.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3236) HycI PF01750.18 BAJ50876.1 - 1.8e-10 40.7 0.0 2.3e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease Sua5_yciO_yrdC PF01300.18 BAJ50877.1 - 7.2e-45 152.7 0.0 1.1e-44 152.1 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.12 BAJ50877.1 - 1.3e-25 88.8 9.3 1.6e-15 56.5 1.3 2.5 2 0 0 2 2 2 2 HypF finger HypF_C PF17788.1 BAJ50877.1 - 1.9e-24 86.3 0.0 3.7e-24 85.4 0.0 1.5 1 0 0 1 1 1 1 HypF Kae1-like domain Acylphosphatase PF00708.18 BAJ50877.1 - 2.4e-23 82.3 0.1 4.4e-23 81.5 0.1 1.5 1 0 0 1 1 1 1 Acylphosphatase DUF4428 PF14471.6 BAJ50877.1 - 0.16 11.9 0.1 8 6.5 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) DZR PF12773.7 BAJ50877.1 - 0.64 10.1 3.4 9.7 6.3 0.1 2.4 2 0 0 2 2 2 0 Double zinc ribbon zf-RING_4 PF14570.6 BAJ50877.1 - 1.1 9.1 6.7 3.2 7.6 0.8 2.5 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 BAJ50877.1 - 2.3 8.3 6.2 3.9 7.5 0.9 2.5 2 0 0 2 2 2 0 Transposase zinc-ribbon domain HypD PF01924.16 BAJ50878.1 - 6e-120 400.5 0.0 7.3e-120 400.2 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family zf-RING_6 PF14835.6 BAJ50878.1 - 0.11 12.4 0.0 0.26 11.2 0.0 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein MTHFR_C PF12225.8 BAJ50878.1 - 0.51 10.0 2.2 0.91 9.2 2.2 1.3 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal HupF_HypC PF01455.18 BAJ50879.1 - 6.4e-16 58.2 0.7 9.5e-16 57.7 0.7 1.3 1 0 0 1 1 1 1 HupF/HypC family FhuF PF06276.12 BAJ50879.1 - 0.013 15.9 0.0 0.028 14.8 0.0 1.6 1 1 0 1 1 1 0 Ferric iron reductase FhuF-like transporter AIRS_C PF02769.22 BAJ50880.1 - 4.2e-22 79.0 0.1 6.1e-22 78.4 0.1 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 BAJ50880.1 - 2.6e-13 50.4 1.8 5.1e-13 49.5 1.8 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain IU_nuc_hydro PF01156.19 BAJ50882.1 - 4.3e-88 295.8 0.1 5e-88 295.6 0.1 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase CbiQ PF02361.16 BAJ50884.1 - 1.1e-26 93.8 17.2 1.6e-26 93.3 17.2 1.2 1 0 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.27 BAJ50885.1 - 8.4e-30 104.1 0.0 1.4e-29 103.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50885.1 - 6.7e-12 45.8 0.7 4.7e-05 23.4 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ50885.1 - 2.7e-07 30.3 0.0 1e-05 25.1 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 BAJ50885.1 - 0.00046 19.9 0.0 0.00088 19.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain IstB_IS21 PF01695.17 BAJ50885.1 - 0.0011 18.7 0.3 0.55 9.9 0.1 2.2 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_22 PF13401.6 BAJ50885.1 - 0.0024 18.2 0.2 0.016 15.5 0.2 2.2 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 BAJ50885.1 - 0.0041 16.1 0.0 0.0081 15.2 0.0 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB KdpD PF02702.17 BAJ50885.1 - 0.0042 16.6 0.0 0.0059 16.1 0.0 1.3 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain AAA_23 PF13476.6 BAJ50885.1 - 0.0043 17.6 0.0 0.0064 17.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 BAJ50885.1 - 0.0048 17.4 0.1 0.0092 16.5 0.1 1.5 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 BAJ50885.1 - 0.0056 16.1 0.1 0.11 11.9 0.0 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 BAJ50885.1 - 0.007 16.8 0.3 0.026 14.9 0.3 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_27 PF13514.6 BAJ50885.1 - 0.038 13.6 0.0 0.079 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ50885.1 - 0.039 14.4 0.1 0.21 12.0 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 BAJ50885.1 - 0.046 13.6 0.0 0.084 12.8 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 BAJ50885.1 - 0.067 13.3 0.1 0.14 12.3 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 BAJ50885.1 - 0.071 12.9 0.1 0.16 11.7 0.0 1.6 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 BAJ50885.1 - 0.071 12.8 0.3 0.6 9.8 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 BAJ50885.1 - 0.079 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 BAJ50885.1 - 0.084 11.5 0.0 0.2 10.3 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 BAJ50885.1 - 0.11 12.7 0.1 0.21 11.8 0.1 1.6 1 0 0 1 1 1 0 AAA domain DUF3584 PF12128.8 BAJ50885.1 - 0.15 9.6 0.3 0.23 8.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) SbcCD_C PF13558.6 BAJ50885.1 - 0.15 12.3 0.0 2.5 8.4 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_14 PF13173.6 BAJ50885.1 - 0.17 12.0 0.1 5.1 7.1 0.1 2.5 2 1 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 BAJ50885.1 - 0.22 10.3 0.4 0.58 8.9 0.3 1.7 2 0 0 2 2 2 0 Predicted ATPase of the ABC class ABC_tran PF00005.27 BAJ50886.1 - 6.1e-28 98.0 0.0 1.1e-27 97.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ50886.1 - 4.2e-08 33.4 0.0 0.00045 20.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ50886.1 - 3.3e-07 30.0 0.0 5.1e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 BAJ50886.1 - 0.00033 20.5 0.2 0.31 10.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_15 PF13175.6 BAJ50886.1 - 0.0006 19.6 0.0 0.028 14.1 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 BAJ50886.1 - 0.00095 19.1 0.1 0.12 12.3 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase Zeta_toxin PF06414.12 BAJ50886.1 - 0.0017 17.7 0.1 0.025 13.9 0.0 2.3 2 1 0 2 2 2 1 Zeta toxin ATPase PF06745.13 BAJ50886.1 - 0.0087 15.4 0.8 1.6 8.0 0.1 2.2 2 0 0 2 2 2 2 KaiC AAA_13 PF13166.6 BAJ50886.1 - 0.0088 14.8 0.1 1 8.0 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 BAJ50886.1 - 0.0094 15.7 0.2 0.02 14.7 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 BAJ50886.1 - 0.01 16.2 0.0 0.018 15.4 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain Mg_chelatase PF01078.21 BAJ50886.1 - 0.017 14.5 0.0 0.029 13.7 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NACHT PF05729.12 BAJ50886.1 - 0.033 14.1 0.3 0.055 13.4 0.3 1.3 1 0 0 1 1 1 0 NACHT domain AAA_22 PF13401.6 BAJ50886.1 - 0.04 14.2 0.0 0.12 12.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 BAJ50886.1 - 0.04 14.1 1.0 0.2 11.8 1.0 2.1 1 1 0 1 1 1 0 AAA domain APS_kinase PF01583.20 BAJ50886.1 - 0.048 13.5 0.5 1 9.3 0.1 2.5 2 0 0 2 2 2 0 Adenylylsulphate kinase SRP54 PF00448.22 BAJ50886.1 - 0.051 13.2 1.0 0.54 9.9 0.1 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DLIC PF05783.11 BAJ50886.1 - 0.052 12.4 0.1 0.084 11.7 0.1 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_5 PF07728.14 BAJ50886.1 - 0.068 13.2 0.3 0.45 10.5 0.1 2.3 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 BAJ50886.1 - 0.082 13.4 0.1 0.15 12.6 0.1 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 BAJ50886.1 - 0.087 12.7 1.6 3.6 7.5 0.2 2.2 2 0 0 2 2 2 0 NTPase ATP_bind_1 PF03029.17 BAJ50886.1 - 0.091 12.5 0.2 6.5 6.5 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein IstB_IS21 PF01695.17 BAJ50886.1 - 0.12 12.1 0.4 5.7 6.6 0.1 2.5 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_25 PF13481.6 BAJ50886.1 - 0.12 11.9 0.4 2.3 7.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 BAJ50886.1 - 0.15 12.3 0.4 0.44 10.8 0.1 2.0 2 0 0 2 2 1 0 AAA domain PfkB PF00294.24 BAJ50887.1 - 2.4e-68 230.7 7.3 2.7e-68 230.5 7.3 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 BAJ50887.1 - 2.4e-11 43.5 0.3 3.5e-11 42.9 0.3 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase AAA_26 PF13500.6 BAJ50887.1 - 0.12 12.1 2.3 4.8 6.9 0.7 2.3 2 0 0 2 2 2 0 AAA domain HMGL-like PF00682.19 BAJ50888.1 - 1.2e-51 175.8 0.0 3.3e-51 174.4 0.0 1.7 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 BAJ50888.1 - 4.8e-24 84.8 0.7 1.5e-22 79.9 0.8 2.2 2 0 0 2 2 2 1 LeuA allosteric (dimerisation) domain SurA_N_3 PF13624.6 BAJ50888.1 - 0.12 12.2 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 SurA N-terminal domain EFP_N PF08207.12 BAJ50889.1 - 1.2e-07 31.6 0.1 3.2e-06 27.1 0.0 2.2 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain eIF-5a PF01287.20 BAJ50889.1 - 1.3e-06 28.4 0.1 2.1e-06 27.7 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold DUF1609 PF07753.11 BAJ50889.1 - 0.011 15.3 0.1 0.013 15.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1609) Diphthami_syn_2 PF01902.17 BAJ50890.1 - 4.1e-65 219.3 0.0 4.7e-65 219.2 0.0 1.0 1 0 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 BAJ50890.1 - 0.026 14.0 0.0 0.08 12.4 0.0 1.8 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC RHH_1 PF01402.21 BAJ50890.1 - 0.25 11.3 2.5 22 5.1 0.1 3.6 4 0 0 4 4 4 0 Ribbon-helix-helix protein, copG family ATP-grasp_2 PF08442.10 BAJ50891.1 - 1.9e-62 210.5 2.4 3e-62 209.8 2.4 1.3 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.19 BAJ50891.1 - 1.4e-17 63.9 0.5 2.9e-17 62.9 0.5 1.5 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 BAJ50891.1 - 1.3e-15 57.4 2.1 2.2e-15 56.7 2.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 BAJ50891.1 - 3.2e-09 36.8 0.8 6.7e-09 35.8 0.8 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp PF02222.22 BAJ50891.1 - 0.0018 17.9 0.1 0.0033 17.0 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 BAJ50891.1 - 0.0068 16.2 1.7 0.013 15.3 0.1 2.1 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding PF02629.19 BAJ50892.1 - 3.2e-28 98.2 0.4 3.2e-28 98.2 0.4 2.1 3 0 0 3 3 3 1 CoA binding domain Ligase_CoA PF00549.19 BAJ50892.1 - 1.9e-16 60.3 0.1 2.8e-16 59.7 0.1 1.2 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 BAJ50892.1 - 4e-14 52.6 0.1 1.3e-13 50.9 0.0 1.8 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 BAJ50892.1 - 1.5e-07 31.9 0.3 6.5e-07 29.8 0.0 2.1 3 0 0 3 3 3 1 CoA binding domain GFO_IDH_MocA PF01408.22 BAJ50892.1 - 0.025 15.4 0.2 0.072 13.9 0.1 1.9 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold SH3_7 PF12914.7 BAJ50892.1 - 0.041 14.1 0.0 0.092 12.9 0.0 1.5 1 0 0 1 1 1 0 SH3 domain of SH3b2 type Metallophos PF00149.28 BAJ50893.1 - 2.3e-22 80.5 0.1 2.9e-22 80.2 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 BAJ50893.1 - 1.2e-05 25.6 0.0 1.6e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Lactamase_B PF00753.27 BAJ50894.1 - 8.8e-15 55.2 3.1 1.3e-14 54.7 3.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 BAJ50894.1 - 1.1e-05 25.1 1.0 2e-05 24.2 1.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 BAJ50894.1 - 0.076 12.4 0.0 0.39 10.1 0.0 1.9 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily domain Ldh_1_N PF00056.23 BAJ50895.1 - 5.7e-39 133.4 0.6 9.1e-39 132.8 0.6 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 BAJ50895.1 - 1.6e-23 83.5 0.0 2.8e-23 82.7 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 BAJ50895.1 - 0.0037 16.9 0.0 0.0082 15.7 0.0 1.5 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase DAO PF01266.24 BAJ50895.1 - 0.23 11.0 2.5 0.43 10.1 1.3 1.9 3 0 0 3 3 3 0 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 BAJ50895.1 - 0.44 10.1 4.0 1.5 8.3 2.3 2.5 2 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain zf-C2H2 PF00096.26 BAJ50896.1 - 3.4e-06 27.2 0.3 4.3e-06 26.9 0.3 1.2 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-Di19 PF05605.12 BAJ50896.1 - 2.9e-05 24.2 0.0 3.4e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_4 PF13894.6 BAJ50896.1 - 3.3e-05 24.4 0.3 4.2e-05 24.0 0.3 1.2 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 BAJ50896.1 - 0.00021 21.5 0.1 0.0003 21.0 0.1 1.3 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-H2C2_2 PF13465.6 BAJ50896.1 - 0.00022 21.5 3.6 0.0058 17.0 1.8 2.1 2 0 0 2 2 2 1 Zinc-finger double domain zf-H2C2_5 PF13909.6 BAJ50896.1 - 0.00029 20.5 0.4 0.00052 19.7 0.4 1.5 1 1 0 1 1 1 1 C2H2-type zinc-finger domain zf-C2H2_6 PF13912.6 BAJ50896.1 - 0.0086 16.1 0.1 0.0099 15.9 0.1 1.2 1 0 0 1 1 1 1 C2H2-type zinc finger DUF2225 PF09986.9 BAJ50896.1 - 0.01 15.5 0.0 0.01 15.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) Actin_micro PF17003.5 BAJ50896.1 - 0.017 14.3 0.0 0.017 14.3 0.0 1.0 1 0 0 1 1 1 0 Putative actin-like family PyrI_C PF02748.15 BAJ50896.1 - 0.022 14.7 0.3 0.028 14.3 0.3 1.2 1 0 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2H2_9 PF16293.5 BAJ50896.1 - 0.026 14.4 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) Rad50_zn_hook PF04423.14 BAJ50896.1 - 0.05 13.5 0.1 0.058 13.2 0.1 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif zf-C2HE PF16278.5 BAJ50896.1 - 0.055 13.9 0.0 0.07 13.6 0.0 1.1 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger zinc_ribbon_5 PF13719.6 BAJ50896.1 - 0.06 13.1 0.1 0.082 12.7 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zf-C2H2_2 PF12756.7 BAJ50896.1 - 0.06 13.7 0.1 0.069 13.5 0.1 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Peptidase_M20 PF01546.28 BAJ50897.1 - 2.7e-33 115.4 0.0 3.6e-33 115.0 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 BAJ50897.1 - 8.2e-17 61.1 0.0 1.4e-16 60.3 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 BAJ50897.1 - 0.011 15.4 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M28 dsrm PF00035.26 BAJ50897.1 - 0.13 12.9 0.0 0.41 11.4 0.0 1.8 1 0 0 1 1 1 0 Double-stranded RNA binding motif VIT1 PF01988.19 BAJ50898.1 - 1.9e-08 34.4 26.8 3.9e-06 26.9 4.8 2.5 2 1 1 3 3 3 2 VIT family Rubrerythrin PF02915.17 BAJ50898.1 - 0.00033 21.1 8.8 0.0064 16.9 8.8 2.1 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 BAJ50898.1 - 0.00098 19.1 1.4 0.0016 18.4 0.4 1.7 2 0 0 2 2 2 1 Ferritin-like domain DUF4249 PF14054.6 BAJ50898.1 - 0.007 16.0 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4249) COQ7 PF03232.13 BAJ50898.1 - 0.048 13.4 1.2 0.16 11.7 1.2 1.9 1 1 0 1 1 1 0 Ubiquinone biosynthesis protein COQ7 MFS_MOT1 PF16983.5 BAJ50898.1 - 0.061 13.7 6.6 0.12 12.8 6.6 1.5 1 0 0 1 1 1 0 Molybdate transporter of MFS superfamily E1-E2_ATPase PF00122.20 BAJ50898.1 - 0.089 12.3 1.9 4.9 6.6 2.0 2.3 1 1 1 2 2 2 0 E1-E2 ATPase ERGIC_N PF13850.6 BAJ50898.1 - 0.1 13.0 1.2 0.63 10.4 1.2 2.3 1 1 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) PalH PF08733.10 BAJ50898.1 - 0.24 10.4 2.8 0.32 10.0 2.8 1.2 1 0 0 1 1 1 0 PalH/RIM21 DUF2070 PF09843.9 BAJ50898.1 - 0.74 8.0 11.4 1.1 7.4 11.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TMEM141 PF15110.6 BAJ50898.1 - 4.9 7.8 5.8 20 5.8 1.5 2.3 1 1 1 2 2 2 0 TMEM141 protein family LapA_dom PF06305.11 BAJ50898.1 - 8.1 6.3 8.1 1.4 8.8 0.3 3.4 3 1 0 3 3 3 0 Lipopolysaccharide assembly protein A domain Adeno_E3_CR2 PF02439.15 BAJ50898.1 - 8.7 6.2 8.2 8.9 6.2 1.5 2.8 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 Sacchrp_dh_C PF16653.5 BAJ50899.1 - 1.4e-27 97.5 0.0 1.8e-27 97.1 0.0 1.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 BAJ50899.1 - 1.9e-13 50.8 0.1 4.8e-13 49.5 0.0 1.7 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain ThiF PF00899.21 BAJ50899.1 - 8.9e-05 22.0 0.0 0.0063 15.9 1.5 2.3 1 1 1 2 2 2 1 ThiF family Shikimate_DH PF01488.20 BAJ50899.1 - 0.00012 22.1 0.1 0.0004 20.5 0.1 1.8 1 1 1 2 2 2 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 BAJ50899.1 - 0.0003 20.2 0.1 0.00055 19.3 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain DapB_N PF01113.20 BAJ50899.1 - 0.0015 18.6 0.1 0.0026 17.9 0.1 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 3HCDH_N PF02737.18 BAJ50899.1 - 0.014 15.3 0.1 0.024 14.5 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 BAJ50899.1 - 0.055 13.7 0.5 0.13 12.6 0.5 1.6 1 0 0 1 1 1 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 BAJ50899.1 - 0.14 11.7 0.2 0.27 10.8 0.2 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Peptidase_M20 PF01546.28 BAJ50900.1 - 5.1e-29 101.5 0.0 6.3e-29 101.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M42 PF05343.14 BAJ50900.1 - 1.7e-05 24.0 0.3 0.29 10.1 0.0 3.3 3 1 1 4 4 4 2 M42 glutamyl aminopeptidase M20_dimer PF07687.14 BAJ50900.1 - 4.9e-05 23.2 0.0 9.9e-05 22.2 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 BAJ50900.1 - 0.00058 19.6 0.0 0.0018 18.0 0.0 1.7 2 0 0 2 2 2 1 Peptidase family M28 Aminotran_3 PF00202.21 BAJ50901.1 - 1.1e-64 218.7 0.0 1.7e-64 218.0 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 BAJ50901.1 - 0.024 13.8 0.0 0.043 13.0 0.0 1.5 1 1 0 1 1 1 0 Aminotransferase class I and II Methyltransf_31 PF13847.6 BAJ50901.1 - 0.17 11.6 0.0 0.45 10.3 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain ABC_tran PF00005.27 BAJ50902.1 - 3.9e-33 114.9 0.0 6.3e-33 114.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 BAJ50902.1 - 1.8e-09 37.6 0.0 5e-09 36.2 0.0 1.8 2 0 0 2 2 1 1 TOBE domain AAA_21 PF13304.6 BAJ50902.1 - 0.00015 21.7 0.0 0.0016 18.3 0.0 2.0 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system PhoH PF02562.16 BAJ50902.1 - 0.0032 17.0 0.1 0.49 9.8 0.0 2.2 2 0 0 2 2 2 1 PhoH-like protein Rad17 PF03215.15 BAJ50902.1 - 0.0051 16.7 0.0 0.0075 16.2 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 BAJ50902.1 - 0.0066 16.9 0.0 0.011 16.1 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 BAJ50902.1 - 0.0072 16.2 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA PF00004.29 BAJ50902.1 - 0.014 15.8 0.0 0.073 13.5 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 BAJ50902.1 - 0.018 15.0 0.7 6.2 6.7 0.0 2.8 3 0 0 3 3 3 0 NTPase ID PF18543.1 BAJ50902.1 - 0.023 14.7 0.1 0.17 11.9 0.0 2.3 2 0 0 2 2 2 0 Intracellular delivery domain AAA_22 PF13401.6 BAJ50902.1 - 0.028 14.7 0.1 0.078 13.3 0.1 1.8 1 1 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 BAJ50902.1 - 0.037 13.9 0.0 0.063 13.2 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 BAJ50902.1 - 0.04 13.7 0.0 0.15 11.8 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein OB_MalK PF17912.1 BAJ50902.1 - 0.046 14.6 0.0 0.21 12.5 0.0 2.1 1 0 0 1 1 1 0 MalK OB fold domain AAA_30 PF13604.6 BAJ50902.1 - 0.051 13.3 0.0 0.09 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAJ50902.1 - 0.054 13.2 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 BAJ50902.1 - 0.055 14.0 0.5 0.11 13.0 0.2 1.6 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 BAJ50902.1 - 0.069 13.1 0.0 0.21 11.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TOBE PF03459.17 BAJ50902.1 - 0.075 13.3 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 TOBE domain NACHT PF05729.12 BAJ50902.1 - 0.081 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 NACHT domain SMC_N PF02463.19 BAJ50902.1 - 0.084 12.3 0.1 2.4 7.5 0.1 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_28 PF13521.6 BAJ50902.1 - 0.11 12.7 0.1 0.22 11.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 BAJ50903.1 - 1.4e-16 60.8 18.2 1.4e-16 60.8 18.2 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2484 PF10658.9 BAJ50903.1 - 0.59 10.5 17.0 0.29 11.5 0.9 3.6 3 1 1 4 4 4 0 Protein of unknown function (DUF2484) BPD_transp_1 PF00528.22 BAJ50904.1 - 6.7e-14 52.0 15.7 6.7e-14 52.0 15.7 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 BAJ50905.1 - 1.4e-18 67.7 0.3 1.9e-18 67.3 0.3 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 BAJ50905.1 - 1.2e-11 44.5 0.6 1.4e-07 31.2 0.2 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 BAJ50905.1 - 1.4e-09 38.4 1.9 0.00022 21.3 0.2 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 BAJ50905.1 - 0.0001 22.1 0.0 0.099 12.4 0.0 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein DUF641 PF04859.12 BAJ50905.1 - 0.015 15.6 0.0 7.5 6.9 0.0 2.4 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) ZapB PF06005.12 BAJ50905.1 - 0.062 13.7 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 Cell division protein ZapB Sacchrp_dh_C PF16653.5 BAJ50906.1 - 1.6e-31 110.4 0.0 2.9e-31 109.5 0.0 1.4 2 0 0 2 2 2 1 Saccharopine dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 BAJ50906.1 - 1.9e-20 73.4 0.3 2.8e-20 72.9 0.3 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Semialdhyde_dh PF01118.24 BAJ50906.1 - 9.5e-08 32.5 0.1 1.5e-07 31.9 0.1 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.17 BAJ50906.1 - 2.8e-05 24.6 0.1 5.1e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.6 BAJ50906.1 - 5e-05 23.3 0.2 8e-05 22.6 0.2 1.3 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 BAJ50906.1 - 0.00015 20.9 0.0 0.00021 20.4 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NmrA PF05368.13 BAJ50906.1 - 0.00044 19.9 0.5 0.00069 19.2 0.5 1.2 1 0 0 1 1 1 1 NmrA-like family DapB_N PF01113.20 BAJ50906.1 - 0.002 18.2 0.1 0.0035 17.4 0.1 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Epimerase PF01370.21 BAJ50906.1 - 0.0031 17.0 0.0 0.0044 16.5 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Shikimate_DH PF01488.20 BAJ50906.1 - 0.011 15.9 0.2 0.019 15.0 0.2 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Ldh_1_N PF00056.23 BAJ50906.1 - 0.043 13.9 0.1 0.078 13.1 0.1 1.4 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain Ald_Xan_dh_C2 PF02738.18 BAJ50907.1 - 6.4e-186 619.0 0.0 7.6e-186 618.8 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ50907.1 - 5.3e-34 116.9 0.7 1.2e-33 115.7 0.3 1.9 2 0 0 2 2 2 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Aminotran_3 PF00202.21 BAJ50908.1 - 2.1e-98 329.6 0.0 2.6e-98 329.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_3 PF00202.21 BAJ50909.1 - 7.7e-70 235.6 0.0 1e-69 235.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 BAJ50909.1 - 0.0019 17.5 0.0 0.0048 16.1 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II DAO PF01266.24 BAJ50909.1 - 0.071 12.7 0.0 0.33 10.5 0.0 1.9 1 1 1 2 2 2 0 FAD dependent oxidoreductase Aminotran_3 PF00202.21 BAJ50910.1 - 5.4e-122 407.3 0.0 6.3e-122 407.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 BAJ50910.1 - 0.1 11.8 0.0 0.4 9.8 0.0 1.8 2 0 0 2 2 2 0 Aminotransferase class I and II REC114-like PF15165.6 BAJ50910.1 - 0.22 11.3 0.0 0.36 10.6 0.0 1.3 1 0 0 1 1 1 0 Meiotic recombination protein REC114-like Lactamase_B PF00753.27 BAJ50911.1 - 4e-27 95.5 0.3 5.5e-27 95.1 0.3 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 BAJ50911.1 - 1.2e-06 28.1 0.1 2.1e-06 27.4 0.1 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 BAJ50911.1 - 0.0055 16.2 0.1 0.0088 15.5 0.1 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 BAJ50911.1 - 0.023 14.6 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Arg_decarb_HB PF17810.1 BAJ50911.1 - 0.042 14.1 0.0 6.2 7.2 0.0 2.4 2 0 0 2 2 2 0 Arginine decarboxylase helical bundle domain Polysacc_deac_1 PF01522.21 BAJ50911.1 - 0.052 13.4 0.0 6.8 6.6 0.0 2.4 2 0 0 2 2 2 0 Polysaccharide deacetylase SRP54 PF00448.22 BAJ50911.1 - 0.057 13.0 0.0 0.087 12.4 0.0 1.2 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain HTH_31 PF13560.6 BAJ50911.1 - 0.15 12.4 0.7 0.33 11.3 0.7 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4325 PF14213.6 BAJ50913.1 - 3.1e-08 33.2 0.1 4.2e-08 32.8 0.1 1.3 1 0 0 1 1 1 1 STAS-like domain of unknown function (DUF4325) DUF4382 PF14321.6 BAJ50913.1 - 0.12 12.7 0.0 0.52 10.6 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4382) MS_channel PF00924.18 BAJ50914.1 - 1.6e-13 50.7 2.5 2.4e-13 50.1 2.5 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF4203 PF13886.6 BAJ50914.1 - 0.086 12.5 8.4 0.13 11.9 8.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4203) UXS1_N PF11803.8 BAJ50914.1 - 0.33 11.3 1.8 0.53 10.7 0.1 2.1 1 1 1 2 2 2 0 UDP-glucuronate decarboxylase N-terminal YbjM PF11045.8 BAJ50914.1 - 0.43 10.8 5.5 0.6 10.3 5.5 1.2 1 0 0 1 1 1 0 Putative inner membrane protein of Enterobacteriaceae GPI2 PF06432.11 BAJ50914.1 - 1.5 8.2 6.1 1.8 7.9 6.1 1.2 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase PALP PF00291.25 BAJ50915.1 - 1e-57 195.8 2.7 1.2e-57 195.5 2.7 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Lambda_tail_I PF06805.12 BAJ50915.1 - 0.029 14.7 0.0 0.077 13.3 0.0 1.7 1 0 0 1 1 1 0 Bacteriophage lambda tail assembly protein I ACP_syn_III_C PF08541.10 BAJ50915.1 - 0.078 13.2 1.0 0.27 11.4 0.0 2.2 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HypA PF01155.19 BAJ50915.1 - 0.085 12.9 0.6 0.4 10.7 0.3 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GP57 PF17594.2 BAJ50915.1 - 0.19 11.5 0.7 20 5.0 0.0 2.7 2 0 0 2 2 2 0 Phage Tail fiber assembly helper gene product 57 Sld5 PF05916.11 BAJ50917.1 - 0.016 15.7 0.4 0.027 15.0 0.4 1.3 1 0 0 1 1 1 0 GINS complex protein Med6 PF04934.14 BAJ50917.1 - 0.053 13.3 0.0 0.067 13.0 0.0 1.2 1 0 0 1 1 1 0 MED6 mediator sub complex component MCM PF00493.23 BAJ50918.1 - 1.5e-96 321.8 0.0 2.3e-96 321.2 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 BAJ50918.1 - 7.3e-36 122.8 0.4 1.3e-35 122.0 0.4 1.3 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 BAJ50918.1 - 2.3e-25 88.8 4.0 5.1e-25 87.7 4.0 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 BAJ50918.1 - 3.9e-10 40.2 0.2 1.2e-09 38.7 0.2 1.8 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 BAJ50918.1 - 7.6e-08 32.0 0.1 0.0016 17.8 0.1 2.3 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 BAJ50918.1 - 4.6e-07 29.9 0.0 1.3e-06 28.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 BAJ50918.1 - 0.00076 19.9 1.0 0.0034 17.8 0.1 2.3 2 1 0 2 2 2 1 AAA ATPase domain AAA_3 PF07726.11 BAJ50918.1 - 0.0012 18.8 0.0 0.0039 17.1 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 BAJ50918.1 - 0.0015 19.0 0.1 0.0055 17.1 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 BAJ50918.1 - 0.0034 17.1 0.0 2.9 7.6 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain NACHT PF05729.12 BAJ50918.1 - 0.027 14.4 0.1 0.43 10.5 0.0 2.5 2 0 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 BAJ50918.1 - 0.039 14.2 0.1 0.3 11.4 0.1 2.5 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 BAJ50918.1 - 0.055 13.4 0.7 13 5.7 0.0 2.6 1 1 1 2 2 2 0 NTPase AAA_7 PF12775.7 BAJ50918.1 - 0.11 12.0 0.0 0.21 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_18 PF13238.6 BAJ50918.1 - 0.14 12.7 0.5 0.51 10.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain RsbRD_N PF14361.6 BAJ50918.1 - 0.16 12.7 1.9 0.23 12.2 0.4 2.0 2 0 0 2 2 2 0 RsbT co-antagonist protein rsbRD N-terminal domain AAA_30 PF13604.6 BAJ50918.1 - 0.61 9.8 3.8 0.37 10.5 0.9 2.1 2 1 0 2 2 2 0 AAA domain DEAD PF00270.29 BAJ50919.1 - 2.6e-23 82.7 0.0 2.7e-22 79.4 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase HHH_5 PF14520.6 BAJ50919.1 - 5.8e-12 46.0 0.0 1.9e-11 44.4 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix domain Helicase_C PF00271.31 BAJ50919.1 - 3.7e-10 40.1 0.0 2.3e-08 34.4 0.0 2.7 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAJ50919.1 - 2e-09 37.7 0.0 3.7e-09 36.8 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HHH_2 PF12826.7 BAJ50919.1 - 5.9e-09 35.9 0.0 1.6e-08 34.5 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 BAJ50919.1 - 2.8e-07 30.2 0.0 6.9e-07 29.0 0.0 1.7 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH PF00633.23 BAJ50919.1 - 3.6e-05 23.4 1.2 0.03 14.2 0.1 3.0 3 0 0 3 3 3 2 Helix-hairpin-helix motif AAA_30 PF13604.6 BAJ50919.1 - 0.00047 19.9 0.2 0.035 13.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain Sec63 PF02889.16 BAJ50919.1 - 0.0037 16.5 0.0 0.0061 15.8 0.0 1.3 1 0 0 1 1 1 1 Sec63 Brl domain Cdd1 PF11731.8 BAJ50919.1 - 0.013 15.7 0.0 0.49 10.7 0.0 2.5 1 1 1 2 2 2 0 Pathogenicity locus HHH_3 PF12836.7 BAJ50919.1 - 0.035 14.4 0.1 0.11 12.8 0.0 1.8 2 0 0 2 2 2 0 Helix-hairpin-helix motif RNA_pol_A_CTD PF03118.15 BAJ50919.1 - 0.07 12.9 0.0 0.16 11.7 0.0 1.7 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain LAL_C2 PF18603.1 BAJ50919.1 - 0.15 12.3 0.6 2.9 8.1 0.2 2.7 2 0 0 2 2 2 0 L-amino acid ligase C-terminal domain 2 ATPase PF06745.13 BAJ50919.1 - 0.15 11.4 0.0 0.27 10.6 0.0 1.4 1 0 0 1 1 1 0 KaiC DSPc PF00782.20 BAJ50920.1 - 5.4e-21 74.8 0.0 6.4e-21 74.6 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase2 PF03162.13 BAJ50920.1 - 3e-09 36.7 0.0 4.2e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 BAJ50920.1 - 2.3e-08 33.9 0.0 2.7e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 BAJ50920.1 - 1.2e-07 31.9 0.0 1.5e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Inositol hexakisphosphate CDKN3 PF05706.12 BAJ50920.1 - 4.8e-06 26.3 0.0 6.6e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase3 PF13350.6 BAJ50920.1 - 0.00077 19.5 0.0 0.0012 18.9 0.0 1.4 1 1 0 1 1 1 1 Tyrosine phosphatase family ParBc PF02195.18 BAJ50921.1 - 8.5e-07 29.2 0.0 3.2e-06 27.3 0.0 1.9 2 0 0 2 2 2 1 ParB-like nuclease domain LAP2alpha PF11560.8 BAJ50922.1 - 0.12 11.8 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 2 alpha Pribosyltran_N PF13793.6 BAJ50923.1 - 1.1e-34 118.8 0.4 5.1e-30 103.8 0.0 2.2 2 0 0 2 2 2 2 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 BAJ50923.1 - 1.2e-18 67.2 6.6 1e-17 64.1 0.5 3.5 3 1 1 4 4 4 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 BAJ50923.1 - 7.3e-08 32.7 1.4 1.5e-07 31.6 0.2 2.1 3 0 0 3 3 3 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 BAJ50923.1 - 1.8e-06 27.6 0.5 3.8e-06 26.5 0.3 1.7 2 0 0 2 2 2 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 BAJ50923.1 - 1.1e-05 25.1 0.2 2.1e-05 24.1 0.1 1.5 1 1 0 1 1 1 1 Phosphoribosyl transferase Mfa_like_2 PF15415.6 BAJ50923.1 - 0.0024 16.8 0.1 0.0037 16.2 0.1 1.2 1 0 0 1 1 1 1 Fimbrillin-like UPF0020 PF01170.18 BAJ50924.1 - 3.5e-21 75.8 0.0 7.3e-20 71.5 0.0 2.2 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Cons_hypoth95 PF03602.15 BAJ50924.1 - 5.2e-07 29.5 0.0 8.2e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 THUMP PF02926.17 BAJ50924.1 - 6.2e-07 29.6 0.3 9.8e-07 29.0 0.3 1.4 1 0 0 1 1 1 1 THUMP domain N6_N4_Mtase PF01555.18 BAJ50924.1 - 5e-06 26.4 0.0 3.3e-05 23.7 0.0 2.1 2 0 0 2 2 2 1 DNA methylase Methyltransf_15 PF09445.10 BAJ50924.1 - 0.051 13.2 0.0 0.086 12.4 0.0 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase N6_Mtase PF02384.16 BAJ50924.1 - 0.2 10.9 0.0 0.67 9.2 0.0 1.8 1 1 0 1 1 1 0 N-6 DNA Methylase Lactamase_B_2 PF12706.7 BAJ50925.1 - 1e-24 87.2 0.0 8.6e-12 45.0 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 BAJ50925.1 - 3.3e-08 33.8 0.5 1.8e-07 31.4 0.5 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 BAJ50925.1 - 0.0012 18.4 0.0 0.0024 17.5 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease RNA_binding PF01877.17 BAJ50926.1 - 5.2e-14 52.5 0.0 2e-13 50.7 0.0 1.7 1 1 0 1 1 1 1 RNA binding Pyr_redox PF00070.27 BAJ50926.1 - 0.036 14.6 0.1 0.085 13.4 0.1 1.7 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase CBS PF00571.28 BAJ50927.1 - 1.4e-26 92.7 2.9 4.5e-14 52.6 0.0 2.1 2 0 0 2 2 2 2 CBS domain Thymidylate_kin PF02223.17 BAJ50928.1 - 1.9e-16 60.3 0.1 2.6e-15 56.6 0.1 2.0 1 1 0 1 1 1 1 Thymidylate kinase AAA_33 PF13671.6 BAJ50928.1 - 1.2e-06 28.7 0.2 0.044 13.9 0.1 2.2 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 BAJ50928.1 - 0.00085 19.9 0.8 0.011 16.3 0.8 2.2 1 1 0 1 1 1 1 AAA domain MobB PF03205.14 BAJ50928.1 - 0.0019 18.1 0.0 0.0044 16.9 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.6 BAJ50928.1 - 0.002 18.5 5.0 0.5 10.8 0.9 2.8 2 1 0 2 2 2 2 AAA domain AAA_30 PF13604.6 BAJ50928.1 - 0.0026 17.5 0.0 0.0039 16.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 BAJ50928.1 - 0.0044 17.0 0.1 0.0094 15.9 0.1 1.5 1 0 0 1 1 1 1 NACHT domain MCD PF05292.11 BAJ50928.1 - 0.0045 16.6 0.0 0.25 10.9 0.0 2.0 2 0 0 2 2 2 1 Malonyl-CoA decarboxylase C-terminal domain dNK PF01712.19 BAJ50928.1 - 0.012 15.4 0.6 0.82 9.5 0.1 2.1 2 0 0 2 2 2 0 Deoxynucleoside kinase AAA_28 PF13521.6 BAJ50928.1 - 0.013 15.7 0.1 0.031 14.5 0.1 1.7 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 BAJ50928.1 - 0.017 14.3 0.1 0.029 13.6 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain NTPase_1 PF03266.15 BAJ50928.1 - 0.019 14.9 0.5 0.048 13.6 0.1 1.8 2 0 0 2 2 2 0 NTPase MeaB PF03308.16 BAJ50928.1 - 0.024 13.6 0.3 0.067 12.2 0.1 1.8 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATPase_2 PF01637.18 BAJ50928.1 - 0.032 14.2 0.5 0.055 13.4 0.5 1.9 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_22 PF13401.6 BAJ50928.1 - 0.04 14.2 0.0 0.087 13.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ50928.1 - 0.042 14.3 0.5 0.12 12.8 0.5 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) LytR_C PF13399.6 BAJ50928.1 - 0.099 13.6 0.1 4 8.5 0.0 2.6 3 0 0 3 3 3 0 LytR cell envelope-related transcriptional attenuator LigT_PEase PF02834.16 BAJ50929.1 - 1.2e-28 99.1 0.0 5.3e-19 68.2 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 BAJ50929.1 - 1.5e-14 54.1 0.0 1.9e-14 53.8 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 BAJ50929.1 - 3.9e-13 49.8 0.0 4.9e-13 49.4 0.0 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain tRNA_NucTransf2 PF09249.11 BAJ50930.1 - 2.4e-36 124.4 0.0 4.4e-36 123.6 0.0 1.4 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 BAJ50930.1 - 2.2e-07 31.1 0.0 4.1e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 BAJ50930.1 - 0.072 13.3 0.0 0.17 12.0 0.0 1.7 1 1 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain RIO1 PF01163.22 BAJ50931.1 - 3.9e-09 36.4 0.1 6.8e-09 35.6 0.1 1.4 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 BAJ50931.1 - 4.1e-06 26.4 0.0 6.3e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAJ50931.1 - 1.7e-05 24.3 0.3 2.5e-05 23.7 0.2 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Choline_kinase PF01633.20 BAJ50931.1 - 0.0064 16.1 0.1 0.0081 15.8 0.1 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase FAD-oxidase_C PF02913.19 BAJ50932.1 - 4.1e-60 203.5 0.1 5.9e-60 203.0 0.1 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 BAJ50932.1 - 4.5e-43 146.3 0.4 1.5e-42 144.6 0.2 2.0 2 0 0 2 2 2 1 FAD binding domain Terminase_4 PF05119.12 BAJ50932.1 - 0.17 12.3 0.0 0.37 11.2 0.0 1.7 1 0 0 1 1 1 0 Phage terminase, small subunit Guanylate_cyc_2 PF09778.9 BAJ50932.1 - 0.18 11.2 0.1 0.3 10.4 0.1 1.3 1 0 0 1 1 1 0 Guanylylate cyclase ROK PF00480.20 BAJ50933.1 - 5.7e-52 177.0 0.0 6.5e-52 176.8 0.0 1.0 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 BAJ50933.1 - 0.00016 20.8 0.0 0.0034 16.4 0.0 2.6 1 1 0 1 1 1 1 Glucokinase AsnC_trans_reg PF01037.21 BAJ50934.1 - 9.7e-12 44.7 0.1 1.4e-07 31.3 0.0 2.2 2 0 0 2 2 2 2 Lrp/AsnC ligand binding domain GYD PF08734.11 BAJ50934.1 - 0.047 13.6 0.1 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 GYD domain DUF4460 PF14687.6 BAJ50934.1 - 0.12 12.5 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) Flavin_Reduct PF01613.18 BAJ50935.1 - 1.3e-38 132.5 0.1 1.5e-38 132.3 0.1 1.0 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 BAJ50935.1 - 0.06 13.1 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF447) tRNA-synt_2 PF00152.20 BAJ50936.1 - 1.9e-87 293.3 0.6 2.3e-87 293.0 0.6 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 BAJ50936.1 - 1.3e-09 37.9 1.5 2.3e-09 37.1 1.5 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain bacHORMA_2 PF18173.1 BAJ50936.1 - 0.0096 15.8 0.0 0.024 14.5 0.0 1.6 2 0 0 2 2 2 1 Bacterial HORMA domain 2 tRNA-synt_2d PF01409.20 BAJ50936.1 - 0.12 11.9 3.2 0.29 10.6 0.1 2.9 3 1 0 3 3 3 0 tRNA synthetases class II core domain (F) DUF2225 PF09986.9 BAJ50937.1 - 0.02 14.6 0.0 0.024 14.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) KH_5 PF13184.6 BAJ50937.1 - 0.03 14.4 0.0 0.054 13.6 0.0 1.4 1 0 0 1 1 1 0 NusA-like KH domain Alba PF01918.21 BAJ50938.1 - 2.7e-18 65.5 0.2 4.1e-18 65.0 0.2 1.3 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 BAJ50938.1 - 0.0017 18.3 0.6 0.0029 17.6 0.6 1.4 1 1 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P Ribosomal_L40e PF01020.17 BAJ50939.1 - 1e-07 31.7 5.1 1.2e-07 31.5 5.1 1.1 1 0 0 1 1 1 1 Ribosomal L40e family zinc_ribbon_2 PF13240.6 BAJ50939.1 - 0.0015 18.2 2.4 0.0019 17.9 2.4 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_6 PF14599.6 BAJ50939.1 - 0.0026 17.7 4.0 0.0059 16.6 4.0 1.6 1 1 0 1 1 1 1 Zinc-ribbon DUF35_N PF12172.8 BAJ50939.1 - 0.0047 16.8 3.8 0.011 15.6 3.8 1.6 1 1 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Rubredoxin_2 PF18073.1 BAJ50939.1 - 0.0057 16.4 1.1 0.0084 15.8 1.1 1.2 1 0 0 1 1 1 1 Rubredoxin metal binding domain HypA PF01155.19 BAJ50939.1 - 0.0082 16.2 0.3 0.0082 16.2 0.3 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CTV_P23 PF04808.12 BAJ50939.1 - 0.0097 15.5 0.9 0.0097 15.5 0.9 1.0 1 0 0 1 1 1 1 Citrus tristeza virus (CTV) P23 protein zf-RING_10 PF16685.5 BAJ50939.1 - 0.017 15.2 1.0 0.017 15.2 1.0 1.1 1 0 0 1 1 1 0 zinc RING finger of MSL2 DNA_primase_S PF01896.19 BAJ50940.1 - 6.9e-12 45.8 0.0 3.9e-10 40.1 0.0 2.4 2 1 0 2 2 2 1 DNA primase small subunit A2L_zn_ribbon PF08792.10 BAJ50940.1 - 1.7 8.5 4.1 9.2 6.1 0.3 2.5 2 0 0 2 2 2 0 A2L zinc ribbon domain DZR PF12773.7 BAJ50940.1 - 2.3 8.3 7.5 6.1 7.0 7.5 1.6 1 1 0 1 1 1 0 Double zinc ribbon CBS PF00571.28 BAJ50941.1 - 2.4e-20 72.7 7.0 3e-13 50.0 0.3 2.5 3 0 0 3 3 3 2 CBS domain ArgJ PF01960.18 BAJ50941.1 - 0.0052 15.6 0.0 0.0058 15.4 0.0 1.2 1 0 0 1 1 1 1 ArgJ family CLP1_P PF16575.5 BAJ50943.1 - 1.5e-29 103.2 0.0 8.1e-29 100.8 0.0 1.9 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop CLP1_N PF16573.5 BAJ50943.1 - 0.002 18.3 0.0 0.0044 17.2 0.0 1.5 1 0 0 1 1 1 1 N-terminal beta-sandwich domain of polyadenylation factor PAC4 PF16093.5 BAJ50943.1 - 0.07 13.3 0.1 3 8.1 0.0 2.5 2 0 0 2 2 2 0 Proteasome assembly chaperone 4 ATP_bind_1 PF03029.17 BAJ50943.1 - 0.074 12.8 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Elf1 PF05129.13 BAJ50945.1 - 2e-19 69.4 0.2 2.5e-19 69.1 0.2 1.0 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.6 BAJ50945.1 - 2.1e-05 24.8 0.4 2.8e-05 24.4 0.4 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar zf-ISL3 PF14690.6 BAJ50945.1 - 0.0083 16.8 0.3 0.41 11.3 0.1 2.4 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zinc_ribbon_5 PF13719.6 BAJ50945.1 - 0.039 13.7 1.6 0.058 13.2 1.6 1.2 1 0 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 BAJ50945.1 - 0.17 12.0 3.1 1.5 9.0 0.1 2.1 1 1 1 2 2 2 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 BAJ50945.1 - 0.19 11.7 1.5 0.41 10.6 1.5 1.5 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf-H2C2_2 PF13465.6 BAJ50945.1 - 0.67 10.5 4.9 2.4 8.7 0.5 2.7 2 1 1 3 3 3 0 Zinc-finger double domain PcrB PF01884.17 BAJ50946.1 - 4e-53 180.2 0.6 5.2e-53 179.8 0.6 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 BAJ50946.1 - 6.2e-10 38.9 0.3 2.5e-09 36.9 0.1 1.8 2 0 0 2 2 2 1 Histidine biosynthesis protein Dus PF01207.17 BAJ50946.1 - 5.5e-07 29.0 0.8 3.9e-05 22.9 0.3 2.1 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) ThiG PF05690.14 BAJ50946.1 - 6.3e-07 28.9 3.4 0.0011 18.4 1.5 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG DHO_dh PF01180.21 BAJ50946.1 - 5.4e-06 25.8 2.0 6.9e-06 25.5 0.7 1.7 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase NanE PF04131.14 BAJ50946.1 - 2.6e-05 23.5 0.6 0.034 13.3 0.2 2.2 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase NMO PF03060.15 BAJ50946.1 - 4.3e-05 23.1 5.9 0.0013 18.2 3.8 2.5 2 1 1 3 3 3 1 Nitronate monooxygenase Trp_syntA PF00290.20 BAJ50946.1 - 5e-05 22.3 1.5 0.0013 17.6 0.9 2.2 2 0 0 2 2 2 1 Tryptophan synthase alpha chain FMN_dh PF01070.18 BAJ50946.1 - 6.6e-05 22.1 2.3 0.00069 18.7 1.8 2.1 2 0 0 2 2 2 1 FMN-dependent dehydrogenase G3P_antiterm PF04309.12 BAJ50946.1 - 0.00026 20.4 1.6 0.00057 19.3 0.5 2.0 3 0 0 3 3 3 1 Glycerol-3-phosphate responsive antiterminator IMPDH PF00478.25 BAJ50946.1 - 0.00046 19.3 4.4 0.017 14.1 1.4 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain TMP-TENI PF02581.17 BAJ50946.1 - 0.0021 17.4 2.9 0.01 15.2 0.4 2.3 2 0 0 2 2 2 1 Thiamine monophosphate synthase Glu_synthase PF01645.17 BAJ50946.1 - 0.0086 15.2 1.0 0.015 14.5 0.2 1.7 2 0 0 2 2 2 1 Conserved region in glutamate synthase DHDPS PF00701.22 BAJ50946.1 - 0.022 13.5 0.5 0.044 12.5 0.0 1.7 2 0 0 2 2 2 0 Dihydrodipicolinate synthetase family HMGL-like PF00682.19 BAJ50946.1 - 0.027 14.0 0.2 0.78 9.2 0.1 2.1 2 0 0 2 2 2 0 HMGL-like Ribul_P_3_epim PF00834.19 BAJ50946.1 - 0.027 13.9 0.7 0.064 12.6 0.4 1.7 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family BtpA PF03437.15 BAJ50946.1 - 0.029 13.8 1.3 1.4 8.3 0.5 2.3 2 0 0 2 2 2 0 BtpA family DUF561 PF04481.12 BAJ50946.1 - 0.043 13.0 0.7 0.48 9.6 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF561) RNA_pol_Rpb5_C PF01191.19 BAJ50947.1 - 5.3e-33 112.7 0.4 5.8e-33 112.6 0.4 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb2_6 PF00562.28 BAJ50948.1 - 1.5e-117 393.0 0.0 2.4e-117 392.3 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 BAJ50948.1 - 1e-43 149.2 0.0 1.5e-43 148.7 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 BAJ50948.1 - 4.4e-27 95.0 0.0 7.2e-27 94.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.16 BAJ50948.1 - 4.4e-27 94.0 0.0 1e-26 92.9 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_7 PF04560.20 BAJ50948.1 - 1.2e-26 92.9 0.1 2.4e-26 91.9 0.1 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 BAJ50948.1 - 8e-18 64.5 2.5 2.6e-17 62.8 2.5 2.0 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 BAJ50948.1 - 1.8e-09 38.0 0.0 4.8e-09 36.6 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpb2_45 PF10385.9 BAJ50948.1 - 0.031 14.5 0.2 0.97 9.7 0.1 2.6 2 0 0 2 2 2 0 RNA polymerase beta subunit external 1 domain RRS1 PF04939.12 BAJ50948.1 - 0.077 12.9 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Ribosome biogenesis regulatory protein (RRS1) SAP PF02037.27 BAJ50948.1 - 4.3 7.2 5.4 1.9 8.3 0.1 2.8 3 0 0 3 3 3 0 SAP domain RNA_pol_Rpb1_1 PF04997.12 BAJ50949.1 - 1.4e-91 307.1 0.0 2.2e-91 306.5 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_5 PF04998.17 BAJ50949.1 - 1e-83 280.8 0.3 1.7e-83 280.1 0.3 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 BAJ50949.1 - 5.9e-74 247.8 0.0 1.6e-73 246.4 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 BAJ50949.1 - 3.1e-38 131.2 0.0 1.8e-37 128.7 0.0 2.2 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 BAJ50949.1 - 2.9e-25 88.3 1.4 1.1e-24 86.5 0.0 2.6 3 0 0 3 3 3 1 RNA polymerase Rpb1, domain 4 DUF35_N PF12172.8 BAJ50949.1 - 0.0016 18.3 5.1 0.95 9.4 0.1 3.5 3 0 0 3 3 3 2 Rubredoxin-like zinc ribbon domain (DUF35_N) FYVE PF01363.21 BAJ50949.1 - 4.1 7.6 4.4 11 6.3 4.4 1.7 1 1 0 1 1 1 0 FYVE zinc finger Ribosomal_L7Ae PF01248.26 BAJ50950.1 - 1.4e-09 37.6 0.0 1.5e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Hpr_kinase_N PF02603.16 BAJ50950.1 - 0.17 11.9 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 HPr Serine kinase N terminus KH_5 PF13184.6 BAJ50951.1 - 1.2e-10 41.3 4.8 7.5e-10 38.8 0.2 2.7 1 1 2 3 3 2 1 NusA-like KH domain KH_2 PF07650.17 BAJ50951.1 - 6.7e-07 29.0 3.4 0.0016 18.2 0.3 2.3 1 1 1 2 2 2 2 KH domain KH_4 PF13083.6 BAJ50951.1 - 7.5e-05 22.5 0.0 0.00015 21.6 0.0 1.5 1 0 0 1 1 1 1 KH domain Ada3 PF10198.9 BAJ50951.1 - 0.015 15.4 0.0 0.022 14.9 0.0 1.1 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 FKBP26_C PF18046.1 BAJ50953.1 - 5e-16 58.6 0.1 8.6e-16 57.8 0.1 1.4 1 0 0 1 1 1 1 FKBP26_C-terminal FKBP_C PF00254.28 BAJ50953.1 - 1.9e-08 34.5 0.0 6.2e-08 32.9 0.0 2.0 2 1 0 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase Proteasome PF00227.26 BAJ50954.1 - 3.8e-52 176.6 0.0 4.3e-52 176.4 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit Beta-Casp PF10996.8 BAJ50955.1 - 7e-23 81.0 0.0 6.1e-22 78.0 0.0 2.3 2 0 0 2 2 2 1 Beta-Casp domain RMMBL PF07521.12 BAJ50955.1 - 8.6e-17 60.8 0.0 2.1e-16 59.6 0.0 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 BAJ50955.1 - 7e-16 58.2 0.0 5.4e-15 55.3 0.0 2.1 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 BAJ50955.1 - 1.7e-15 57.6 0.1 5e-15 56.0 0.1 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily KH_7 PF17214.3 BAJ50955.1 - 2.1e-13 50.0 0.8 6.3e-13 48.5 0.8 1.9 1 0 0 1 1 1 1 KH domain Lactamase_B_2 PF12706.7 BAJ50955.1 - 1.1e-05 25.0 0.0 2.8e-05 23.7 0.0 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 BAJ50955.1 - 0.0025 17.7 0.0 0.007 16.3 0.0 1.7 2 0 0 2 2 2 1 Beta-lactamase superfamily domain LSM PF01423.22 BAJ50956.1 - 8.4e-24 83.0 1.4 9.4e-24 82.9 1.4 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 BAJ50956.1 - 1.2e-07 31.8 0.1 1.5e-07 31.5 0.1 1.2 1 0 0 1 1 1 1 Ataxin 2 SM domain Hfq PF17209.3 BAJ50956.1 - 0.0024 17.5 0.1 0.0028 17.3 0.1 1.2 1 0 0 1 1 1 1 Hfq protein Halogen_Hydrol PF10112.9 BAJ50957.1 - 0.037 14.0 0.4 0.037 14.0 0.4 1.1 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein YojJ PF10372.9 BAJ50957.1 - 0.13 12.4 1.0 0.18 11.9 1.0 1.3 1 0 0 1 1 1 0 Bacterial membrane-spanning protein N-terminus PCRF PF03462.18 BAJ50957.1 - 0.15 11.9 2.7 0.15 11.9 2.7 1.0 1 0 0 1 1 1 0 PCRF domain Latarcin PF10279.9 BAJ50957.1 - 0.53 10.7 4.8 2 8.9 4.8 1.8 1 1 0 1 1 1 0 Latarcin precursor ParE_toxin PF05016.15 BAJ50958.1 - 3.5e-06 27.5 0.7 4.2e-06 27.3 0.7 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE Gp49 PF05973.14 BAJ50958.1 - 0.015 15.4 0.0 0.018 15.2 0.0 1.1 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) SPOR PF05036.13 BAJ50958.1 - 0.032 14.6 0.0 0.042 14.2 0.0 1.4 1 1 0 1 1 1 0 Sporulation related domain Ribosomal_L37e PF01907.19 BAJ50959.1 - 6.3e-23 80.7 10.0 7e-23 80.5 10.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e DNA_RNApol_7kD PF03604.13 BAJ50959.1 - 0.00024 20.7 9.3 0.00035 20.2 2.7 2.2 1 1 1 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.7 BAJ50959.1 - 0.002 18.1 1.1 0.0024 17.9 1.1 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 BAJ50959.1 - 0.0045 16.3 2.6 0.0086 15.4 2.6 1.5 1 1 0 1 1 1 1 zinc-ribbon domain HypA PF01155.19 BAJ50959.1 - 0.0065 16.5 0.8 0.0073 16.3 0.8 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubredoxin_2 PF18073.1 BAJ50959.1 - 0.013 15.2 5.9 0.43 10.3 0.3 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain zn-ribbon_14 PF16503.5 BAJ50959.1 - 0.045 13.3 4.0 2.7 7.6 0.3 2.3 2 0 0 2 2 2 0 Zinc-ribbon zf-C3HC4_2 PF13923.6 BAJ50959.1 - 0.059 13.2 3.7 0.076 12.9 3.7 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) UPF0547 PF10571.9 BAJ50959.1 - 0.21 11.7 5.8 1.6 8.8 0.6 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 MraY_sig1 PF10555.9 BAJ50959.1 - 0.24 11.0 1.3 0.35 10.5 1.3 1.3 1 0 0 1 1 1 0 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DUF35_N PF12172.8 BAJ50959.1 - 0.26 11.2 7.3 0.35 10.8 7.3 1.2 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) PriA_CRR PF18319.1 BAJ50959.1 - 0.29 11.1 13.3 1.8 8.6 2.5 2.4 1 1 1 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain zinc_ribbon_2 PF13240.6 BAJ50959.1 - 0.36 10.6 7.1 3.4 7.5 6.9 2.1 1 1 1 2 2 2 0 zinc-ribbon domain Glyco_tranf_2_3 PF13641.6 BAJ50961.1 - 2.5e-30 106.1 0.0 3.8e-30 105.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 BAJ50961.1 - 1.6e-23 83.3 0.0 2.8e-23 82.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 BAJ50961.1 - 6.7e-23 81.6 1.7 6.7e-23 81.6 1.7 2.4 3 0 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 BAJ50961.1 - 6.7e-13 48.5 0.0 1.1e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Cellulose_synt PF03552.14 BAJ50961.1 - 4.7e-06 25.4 3.2 3.4e-05 22.6 0.7 2.1 2 0 0 2 2 2 1 Cellulose synthase Glyco_tranf_2_4 PF13704.6 BAJ50961.1 - 0.00029 21.3 0.0 0.00083 19.8 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferase family 2 Tweety PF04906.13 BAJ50961.1 - 0.012 14.3 1.7 0.035 12.8 0.5 2.1 2 0 0 2 2 2 0 Tweety SDH_C PF18317.1 BAJ50962.1 - 0.099 12.4 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 Shikimate 5'-dehydrogenase C-terminal domain Radical_SAM PF04055.21 BAJ50963.1 - 1.8e-25 90.3 0.6 1.2e-24 87.5 0.5 2.0 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 BAJ50963.1 - 6.7e-16 58.4 0.0 1.7e-15 57.1 0.0 1.6 2 0 0 2 2 2 1 B12 binding domain Pox_H7 PF04787.12 BAJ50963.1 - 0.039 14.5 0.1 0.072 13.6 0.1 1.4 1 0 0 1 1 1 0 Late protein H7 DoxX PF07681.12 BAJ50964.1 - 0.0043 17.6 3.4 0.0043 17.6 3.4 3.1 1 1 2 3 3 3 2 DoxX Pox_A9 PF04835.12 BAJ50965.1 - 5.3 7.3 8.0 0.16 12.2 1.4 1.9 2 0 0 2 2 2 0 A9 protein conserved region IGPD PF00475.18 BAJ50967.1 - 8.8e-49 165.5 1.8 8.8e-49 165.5 1.8 1.3 2 0 0 2 2 2 1 Imidazoleglycerol-phosphate dehydratase Fae PF08714.11 BAJ50967.1 - 0.026 14.5 0.4 0.11 12.5 0.2 2.0 1 1 1 2 2 2 0 Formaldehyde-activating enzyme (Fae) HisG PF01634.18 BAJ50968.1 - 2e-41 141.6 0.0 3.4e-41 140.9 0.0 1.4 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 BAJ50968.1 - 4.2e-16 58.9 0.0 1.5e-15 57.0 0.0 1.9 2 0 0 2 2 2 1 HisG, C-terminal domain GATase PF00117.28 BAJ50969.1 - 2e-19 70.1 0.0 2.3e-19 69.9 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 BAJ50969.1 - 1.5e-05 24.7 0.0 2.2e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 BAJ50969.1 - 0.0021 17.9 1.7 0.043 13.5 0.1 2.7 3 1 0 3 3 3 1 Peptidase C26 PRA-CH PF01502.18 BAJ50970.1 - 3.8e-35 119.5 0.0 4.7e-35 119.3 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase DUF3239 PF11580.8 BAJ50970.1 - 0.038 14.3 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3239) DUF98 PF01947.16 BAJ50970.1 - 0.062 13.3 0.0 0.079 12.9 0.0 1.1 1 0 0 1 1 1 0 p-hydroxybenzoic acid synthase His_biosynth PF00977.21 BAJ50971.1 - 1.7e-87 292.7 1.0 1.9e-87 292.5 1.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.15 BAJ50971.1 - 1.5e-09 37.7 4.5 3.1e-07 30.1 4.5 2.2 1 1 0 1 1 1 1 Nitronate monooxygenase ThiG PF05690.14 BAJ50971.1 - 1.7e-08 34.1 3.8 0.001 18.4 0.4 2.2 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 BAJ50971.1 - 1.7e-07 30.6 0.1 0.0019 17.3 0.1 2.2 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) DHO_dh PF01180.21 BAJ50971.1 - 7.2e-06 25.4 0.1 0.0014 17.9 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase TMP-TENI PF02581.17 BAJ50971.1 - 1e-05 24.9 0.4 0.07 12.5 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase G3P_antiterm PF04309.12 BAJ50971.1 - 0.00013 21.4 0.5 0.013 14.9 0.1 2.2 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator IMPDH PF00478.25 BAJ50971.1 - 0.0014 17.7 3.4 0.23 10.4 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain PcrB PF01884.17 BAJ50971.1 - 0.0095 15.4 0.5 0.099 12.1 0.0 2.0 2 0 0 2 2 2 1 PcrB family Trp_syntA PF00290.20 BAJ50971.1 - 0.027 13.3 1.4 0.042 12.7 0.2 1.8 2 0 0 2 2 2 0 Tryptophan synthase alpha chain Met_asp_mut_E PF06368.11 BAJ50971.1 - 0.043 12.3 0.1 0.13 10.7 0.0 1.7 2 0 0 2 2 2 0 Methylaspartate mutase E chain (MutE) FMN_dh PF01070.18 BAJ50971.1 - 0.32 10.0 5.3 3.9 6.4 0.8 2.4 2 1 0 2 2 2 0 FMN-dependent dehydrogenase His_biosynth PF00977.21 BAJ50972.1 - 2.8e-52 177.5 0.4 3.1e-52 177.3 0.4 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Ssu72 PF04722.13 BAJ50974.1 - 0.012 15.2 0.2 0.021 14.4 0.2 1.4 1 0 0 1 1 1 0 Ssu72-like protein NCD1 PF04904.13 BAJ50974.1 - 0.088 12.8 0.5 4.1 7.5 0.1 2.5 1 1 1 2 2 2 0 NAB conserved region 1 (NCD1) DUF4392 PF14336.6 BAJ50975.1 - 3.7e-63 213.7 0.2 4.7e-63 213.4 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4392) ATPase PF06745.13 BAJ50976.1 - 3e-56 190.4 0.0 3.8e-56 190.0 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 BAJ50976.1 - 5.6e-07 29.3 0.0 9.3e-07 28.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain PAXNEB PF05625.11 BAJ50976.1 - 0.00015 21.0 0.1 0.00025 20.3 0.1 1.2 1 0 0 1 1 1 1 PAXNEB protein RecA PF00154.21 BAJ50976.1 - 0.0002 20.9 0.0 0.00054 19.5 0.0 1.6 2 0 0 2 2 2 1 recA bacterial DNA recombination protein Rad51 PF08423.11 BAJ50976.1 - 0.00033 20.0 0.1 0.00079 18.8 0.1 1.6 1 0 0 1 1 1 1 Rad51 ATP-synt_ab PF00006.25 BAJ50976.1 - 0.00048 19.8 0.0 0.00078 19.2 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain MEDS PF14417.6 BAJ50976.1 - 0.001 18.9 0.1 0.0039 17.0 0.0 1.8 1 1 1 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain GvpD PF07088.11 BAJ50976.1 - 0.0014 17.3 0.5 0.99 8.0 0.1 2.1 2 0 0 2 2 2 2 GvpD gas vesicle protein AAA_22 PF13401.6 BAJ50976.1 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 BAJ50976.1 - 0.0058 16.7 0.1 0.058 13.4 0.0 2.3 2 1 0 2 2 2 1 AAA domain T2SSE PF00437.20 BAJ50976.1 - 0.0075 15.4 0.0 0.012 14.7 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_7 PF12775.7 BAJ50976.1 - 0.011 15.3 0.2 0.029 13.9 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region DnaB_C PF03796.15 BAJ50976.1 - 0.029 13.7 0.0 0.047 13.0 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain DEAD PF00270.29 BAJ50976.1 - 0.052 13.3 0.0 0.12 12.2 0.0 1.5 1 1 0 1 1 1 0 DEAD/DEAH box helicase DAP3 PF10236.9 BAJ50976.1 - 0.076 12.2 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_16 PF13191.6 BAJ50976.1 - 0.083 13.3 0.2 0.17 12.2 0.2 1.7 2 1 0 2 2 1 0 AAA ATPase domain AAA_24 PF13479.6 BAJ50976.1 - 0.099 12.4 0.0 0.27 10.9 0.0 1.7 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 BAJ50976.1 - 0.14 11.9 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein PolC_DP2 PF03833.13 BAJ50977.1 - 0 1029.2 0.0 0 1026.8 0.0 1.8 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 zinc-ribbons_6 PF07191.12 BAJ50977.1 - 0.0049 16.8 11.3 0.067 13.2 0.1 2.4 2 0 0 2 2 2 2 zinc-ribbons HNH_5 PF14279.6 BAJ50977.1 - 0.035 14.0 0.0 0.035 14.0 0.0 3.3 3 1 0 3 3 3 0 HNH endonuclease Rubredoxin_2 PF18073.1 BAJ50977.1 - 0.061 13.1 16.5 0.16 11.7 1.3 3.3 3 0 0 3 3 3 0 Rubredoxin metal binding domain DZR PF12773.7 BAJ50977.1 - 0.067 13.2 18.8 0.51 10.4 0.7 2.7 2 1 0 2 2 2 0 Double zinc ribbon AbrB_C PF18277.1 BAJ50977.1 - 0.069 12.8 0.1 1.7 8.4 0.0 2.5 2 0 0 2 2 2 0 AbrB C-terminal domain HypA PF01155.19 BAJ50977.1 - 0.34 10.9 16.1 0.5 10.4 0.3 3.4 2 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 BAJ50977.1 - 0.58 10.3 19.1 0.093 12.9 1.5 3.5 3 0 0 3 3 3 0 Zinc ribbon domain HTH_5 PF01022.20 BAJ50978.1 - 1.3e-07 31.3 0.5 1.8e-07 30.9 0.5 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family FaeA PF04703.12 BAJ50978.1 - 6.5e-05 23.2 0.1 0.00023 21.5 0.0 1.8 1 1 1 2 2 2 1 FaeA-like protein HTH_20 PF12840.7 BAJ50978.1 - 8e-05 22.6 0.3 0.00012 22.1 0.3 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 BAJ50978.1 - 9.8e-05 21.8 0.1 0.00014 21.4 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 BAJ50978.1 - 0.002 18.4 0.1 0.0024 18.2 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.10 BAJ50978.1 - 0.0028 17.4 0.1 0.004 16.9 0.1 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain RP-C PF03428.13 BAJ50978.1 - 0.0037 16.9 0.1 0.0038 16.9 0.1 1.2 1 0 0 1 1 1 1 Replication protein C N-terminal domain TFIIE_alpha PF02002.17 BAJ50978.1 - 0.011 15.5 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit Sigma70_r4_2 PF08281.12 BAJ50978.1 - 0.031 13.9 0.1 0.052 13.2 0.1 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 MarR_2 PF12802.7 BAJ50978.1 - 0.047 13.6 0.1 0.069 13.0 0.1 1.2 1 0 0 1 1 1 0 MarR family TrmB PF01978.19 BAJ50978.1 - 0.066 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Sld3_N PF18523.1 BAJ50978.1 - 0.078 13.1 0.0 0.087 12.9 0.0 1.0 1 0 0 1 1 1 0 Sld3 N-terminal domain HTH_9 PF08221.11 BAJ50978.1 - 0.081 13.0 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain MerR_1 PF13411.6 BAJ50978.1 - 0.086 12.9 0.1 0.14 12.3 0.1 1.4 1 0 0 1 1 1 0 MerR HTH family regulatory protein Sec61_beta PF03911.16 BAJ50979.1 - 5.1e-16 58.4 0.2 5.7e-16 58.3 0.2 1.0 1 0 0 1 1 1 1 Sec61beta family THF_DHG_CYH_C PF02882.19 BAJ50979.1 - 0.15 11.3 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RMMBL PF07521.12 BAJ50980.1 - 2.2e-05 24.3 0.0 5.5e-05 23.0 0.0 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 BAJ50980.1 - 3.3e-05 23.4 0.0 5.9e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 BAJ50980.1 - 0.0087 15.6 0.6 0.14 11.7 0.7 2.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 BAJ50980.1 - 0.078 13.0 2.6 2.7 7.9 2.5 2.4 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily DUF2070 PF09843.9 BAJ50981.1 - 1.9e-111 373.1 0.9 2.2e-111 372.9 0.9 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) DHC PF09626.10 BAJ50981.1 - 0.032 15.1 0.0 0.089 13.7 0.0 1.7 2 0 0 2 2 2 0 Dihaem cytochrome c ASFV_L11L PF05293.11 BAJ50981.1 - 0.26 11.6 3.2 0.66 10.3 0.5 2.9 3 0 0 3 3 3 0 African swine fever virus (ASFV) L11L protein DUF4781 PF16013.5 BAJ50981.1 - 7 5.4 12.1 0.54 9.0 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4781) PqqD PF05402.12 BAJ50982.1 - 1.5e-10 41.2 0.4 2e-10 40.8 0.4 1.2 1 0 0 1 1 1 1 Coenzyme PQQ synthesis protein D (PqqD) VP4_haemagglut PF00426.18 BAJ50982.1 - 0.083 13.1 0.0 0.092 12.9 0.0 1.1 1 0 0 1 1 1 0 Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain PRODH PF18327.1 BAJ50982.1 - 0.085 13.1 0.1 0.14 12.4 0.1 1.5 1 0 0 1 1 1 0 Proline utilization A proline dehydrogenase N-terminal domain Alba PF01918.21 BAJ50983.1 - 1.3e-08 34.6 0.5 1.9e-08 34.0 0.1 1.4 2 0 0 2 2 2 1 Alba Acyl-CoA_dh_1 PF00441.24 BAJ50984.1 - 3.6e-34 118.1 1.8 5.6e-34 117.5 1.8 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 BAJ50984.1 - 7.2e-28 97.5 0.1 1.7e-27 96.3 0.1 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 BAJ50984.1 - 6.1e-16 58.9 0.1 1.1e-15 58.1 0.1 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 BAJ50984.1 - 1.2e-10 41.5 0.0 2e-10 40.7 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain NAD_synthase PF02540.17 BAJ50985.1 - 1.8e-73 246.6 0.0 2.2e-73 246.4 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 BAJ50985.1 - 8.8e-07 28.0 0.0 0.00016 20.6 0.0 2.3 2 0 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.21 BAJ50985.1 - 2.1e-05 24.3 0.0 3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 BAJ50985.1 - 0.029 13.9 0.0 0.054 13.0 0.0 1.5 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC GAS PF13851.6 BAJ50986.1 - 5.1e-06 26.0 30.5 8.7e-05 22.0 13.2 2.2 1 1 1 2 2 2 2 Growth-arrest specific micro-tubule binding Spc7 PF08317.11 BAJ50986.1 - 3.1e-05 23.0 19.2 0.0093 14.9 2.8 2.1 1 1 1 2 2 2 2 Spc7 kinetochore protein Spectrin PF00435.21 BAJ50986.1 - 3.4e-05 24.3 13.7 0.0023 18.4 1.7 2.6 1 1 1 2 2 2 2 Spectrin repeat EzrA PF06160.12 BAJ50986.1 - 8.4e-05 20.9 18.0 0.00023 19.5 18.0 1.5 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA DivIC PF04977.15 BAJ50986.1 - 9.6e-05 22.1 23.0 0.038 13.7 3.0 4.6 1 1 2 4 4 4 1 Septum formation initiator TPR_MLP1_2 PF07926.12 BAJ50986.1 - 0.0001 22.4 21.9 0.023 14.7 9.3 2.5 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein DUF4201 PF13870.6 BAJ50986.1 - 0.00011 22.0 12.7 0.00011 22.0 12.7 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF4201) APG6_N PF17675.1 BAJ50986.1 - 0.00011 22.8 22.3 0.001 19.6 11.6 2.3 1 1 1 2 2 2 2 Apg6 coiled-coil region BLOC1_2 PF10046.9 BAJ50986.1 - 0.00011 22.4 18.3 0.012 15.9 3.3 3.5 1 1 2 3 3 3 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF812 PF05667.11 BAJ50986.1 - 0.00012 21.2 11.8 0.00016 20.7 11.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) DUF3450 PF11932.8 BAJ50986.1 - 0.00013 21.4 19.0 0.024 13.9 10.4 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF3450) Tropomyosin_1 PF12718.7 BAJ50986.1 - 0.00019 21.6 10.7 0.00019 21.6 10.7 1.9 2 0 0 2 2 2 1 Tropomyosin like FPP PF05911.11 BAJ50986.1 - 0.00026 19.3 13.6 0.0004 18.8 12.9 1.6 1 1 0 1 1 1 1 Filament-like plant protein, long coiled-coil Sec34 PF04136.15 BAJ50986.1 - 0.0005 20.0 15.0 0.071 13.0 6.2 2.9 1 1 1 2 2 2 2 Sec34-like family ZapB PF06005.12 BAJ50986.1 - 0.00053 20.4 23.4 0.08 13.4 6.0 3.5 1 1 2 3 3 3 2 Cell division protein ZapB CENP-F_leu_zip PF10473.9 BAJ50986.1 - 0.00061 19.8 17.4 0.14 12.2 8.6 2.9 1 1 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ADIP PF11559.8 BAJ50986.1 - 0.00067 19.8 21.2 0.021 14.9 10.3 2.4 1 1 1 2 2 2 2 Afadin- and alpha -actinin-Binding TMF_TATA_bd PF12325.8 BAJ50986.1 - 0.00085 19.5 19.9 0.014 15.6 8.2 2.3 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding PspA_IM30 PF04012.12 BAJ50986.1 - 0.00087 18.9 15.3 0.049 13.2 5.8 2.1 1 1 1 2 2 2 2 PspA/IM30 family S6OS1 PF15676.5 BAJ50986.1 - 0.00087 17.9 2.6 0.0011 17.5 2.6 1.2 1 0 0 1 1 1 1 Six6 opposite strand transcript 1 family Fib_alpha PF08702.10 BAJ50986.1 - 0.0013 18.9 15.2 0.094 12.9 6.4 2.2 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family Jnk-SapK_ap_N PF09744.9 BAJ50986.1 - 0.0019 18.4 18.2 0.0075 16.5 12.3 2.3 1 1 1 2 2 2 1 JNK_SAPK-associated protein-1 TACC_C PF05010.14 BAJ50986.1 - 0.0021 17.9 12.3 0.018 14.8 8.2 2.1 1 1 1 2 2 2 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal COG6 PF06419.11 BAJ50986.1 - 0.0028 16.0 12.3 0.32 9.1 6.7 2.5 1 1 0 2 2 2 2 Conserved oligomeric complex COG6 Prefoldin_2 PF01920.20 BAJ50986.1 - 0.0031 17.4 19.7 0.44 10.5 0.9 4.2 1 1 3 4 4 4 2 Prefoldin subunit IFT57 PF10498.9 BAJ50986.1 - 0.0035 16.4 18.6 0.1 11.6 3.0 2.2 1 1 1 2 2 2 2 Intra-flagellar transport protein 57 Atg14 PF10186.9 BAJ50986.1 - 0.0043 16.2 13.9 0.0064 15.6 13.9 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3584 PF12128.8 BAJ50986.1 - 0.0078 13.8 14.1 0.01 13.4 14.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF948 PF06103.11 BAJ50986.1 - 0.009 16.3 2.6 0.009 16.3 2.6 3.3 3 1 0 3 3 2 1 Bacterial protein of unknown function (DUF948) Fez1 PF06818.15 BAJ50986.1 - 0.0099 16.3 13.9 0.062 13.8 13.9 1.9 1 1 0 1 1 1 1 Fez1 FapA PF03961.13 BAJ50986.1 - 0.01 14.5 12.6 0.036 12.7 4.5 2.1 1 1 1 2 2 2 0 Flagellar Assembly Protein A bZIP_1 PF00170.21 BAJ50986.1 - 0.011 15.8 15.4 1.8 8.7 0.8 4.2 2 1 2 4 4 4 0 bZIP transcription factor Filament PF00038.21 BAJ50986.1 - 0.014 15.0 20.8 0.05 13.2 9.4 2.3 1 1 1 2 2 2 0 Intermediate filament protein Occludin_ELL PF07303.13 BAJ50986.1 - 0.014 16.1 13.1 0.43 11.3 5.6 3.2 1 1 2 3 3 3 0 Occludin homology domain Spore_III_AB PF09548.10 BAJ50986.1 - 0.015 15.4 11.6 0.2 11.8 11.6 2.3 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) SHE3 PF17078.5 BAJ50986.1 - 0.016 14.9 20.6 0.13 11.9 7.1 2.2 1 1 0 2 2 2 0 SWI5-dependent HO expression protein 3 DUF4618 PF15397.6 BAJ50986.1 - 0.016 14.6 16.7 0.094 12.1 1.2 3.1 1 1 1 3 3 3 0 Domain of unknown function (DUF4618) Bacillus_HBL PF05791.11 BAJ50986.1 - 0.018 14.9 6.0 0.035 13.9 1.4 2.4 2 1 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Rabaptin PF03528.15 BAJ50986.1 - 0.018 13.8 0.1 0.018 13.8 0.1 2.1 1 1 1 2 2 2 0 Rabaptin ATG16 PF08614.11 BAJ50986.1 - 0.019 15.2 23.1 0.072 13.3 15.9 2.4 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) BRE1 PF08647.11 BAJ50986.1 - 0.019 15.0 15.2 0.23 11.5 6.9 3.0 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase LMBR1 PF04791.16 BAJ50986.1 - 0.021 13.8 4.2 0.031 13.2 4.2 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4795 PF16043.5 BAJ50986.1 - 0.022 14.4 12.5 0.99 9.0 0.9 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4795) Mod_r PF07200.13 BAJ50986.1 - 0.032 14.3 21.6 0.23 11.5 6.4 2.7 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein OmpH PF03938.14 BAJ50986.1 - 0.038 14.3 15.8 0.047 14.0 7.6 2.3 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) TMF_DNA_bd PF12329.8 BAJ50986.1 - 0.04 13.9 17.0 0.51 10.4 8.0 3.6 2 2 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Borrelia_lipo_1 PF05714.11 BAJ50986.1 - 0.045 13.5 6.6 0.074 12.8 6.6 1.3 1 0 0 1 1 1 0 Borrelia burgdorferi virulent strain associated lipoprotein DUF4407 PF14362.6 BAJ50986.1 - 0.045 13.1 13.7 0.37 10.1 12.6 2.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SKA2 PF16740.5 BAJ50986.1 - 0.046 13.5 15.9 0.58 10.0 2.6 3.5 1 1 3 4 4 4 0 Spindle and kinetochore-associated protein 2 T3SSipB PF16535.5 BAJ50986.1 - 0.048 14.1 3.6 1.2 9.6 1.3 2.8 1 1 2 3 3 3 0 Type III cell invasion protein SipB BST2 PF16716.5 BAJ50986.1 - 0.05 14.2 1.9 0.05 14.2 1.9 3.0 1 1 2 3 3 2 0 Bone marrow stromal antigen 2 DUF4472 PF14739.6 BAJ50986.1 - 0.05 14.3 13.4 0.13 13.0 7.1 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) HAUS-augmin3 PF14932.6 BAJ50986.1 - 0.053 13.1 19.7 0.24 10.9 4.4 2.1 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 FH2 PF02181.23 BAJ50986.1 - 0.061 12.4 6.7 0.2 10.8 1.8 2.1 1 1 1 2 2 2 0 Formin Homology 2 Domain DUF4094 PF13334.6 BAJ50986.1 - 0.065 13.7 3.9 0.12 12.8 0.1 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4094) Lebercilin PF15619.6 BAJ50986.1 - 0.065 12.9 23.0 0.097 12.3 14.0 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease JIP_LZII PF16471.5 BAJ50986.1 - 0.066 13.4 16.2 0.72 10.1 7.8 3.0 2 1 1 3 3 3 0 JNK-interacting protein leucine zipper II CC2-LZ PF16516.5 BAJ50986.1 - 0.071 13.5 11.9 4.6 7.7 0.6 3.3 1 1 2 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Cir_Bir_Yir PF06022.11 BAJ50986.1 - 0.073 12.6 4.4 0.17 11.4 4.4 1.7 1 1 0 1 1 1 0 Plasmodium variant antigen protein Cir/Yir/Bir Laminin_I PF06008.14 BAJ50986.1 - 0.081 12.6 17.1 0.13 11.9 17.1 1.2 1 0 0 1 1 1 0 Laminin Domain I PRKG1_interact PF15898.5 BAJ50986.1 - 0.081 13.8 21.0 0.19 12.7 11.9 2.3 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Taxilin PF09728.9 BAJ50986.1 - 0.082 12.1 16.2 1.4 8.1 6.9 2.5 1 1 1 2 2 2 0 Myosin-like coiled-coil protein KASH_CCD PF14662.6 BAJ50986.1 - 0.092 12.6 18.3 0.15 11.8 18.3 1.3 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH LOH1CR12 PF10158.9 BAJ50986.1 - 0.093 12.8 6.6 0.12 12.4 2.4 2.5 1 1 1 2 2 2 0 Tumour suppressor protein UPF0242 PF06785.11 BAJ50986.1 - 0.098 12.8 20.4 0.52 10.4 10.8 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Tropomyosin PF00261.20 BAJ50986.1 - 0.1 11.9 13.9 0.69 9.2 8.4 2.4 1 1 0 2 2 2 0 Tropomyosin TolA_bind_tri PF16331.5 BAJ50986.1 - 0.1 12.7 29.0 0.085 12.9 6.9 3.4 1 1 1 3 3 3 0 TolA binding protein trimerisation Perilipin PF03036.16 BAJ50986.1 - 0.1 11.6 12.1 0.14 11.2 12.1 1.1 1 0 0 1 1 1 0 Perilipin family DHR10 PF18595.1 BAJ50986.1 - 0.11 12.6 22.5 1.1 9.3 11.3 2.9 1 1 2 3 3 3 0 Designed helical repeat protein 10 domain AAA_13 PF13166.6 BAJ50986.1 - 0.11 11.1 11.7 0.1 11.2 5.0 1.8 1 1 1 2 2 2 0 AAA domain HMMR_N PF15905.5 BAJ50986.1 - 0.12 11.9 15.4 0.2 11.1 8.8 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF724 PF05266.14 BAJ50986.1 - 0.13 12.1 9.1 0.81 9.5 2.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) V_ATPase_I PF01496.19 BAJ50986.1 - 0.13 10.2 10.8 0.2 9.5 10.8 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family HAP1_N PF04849.13 BAJ50986.1 - 0.13 11.4 20.6 0.081 12.1 9.6 2.2 1 1 1 2 2 2 0 HAP1 N-terminal conserved region DUF4686 PF15742.5 BAJ50986.1 - 0.14 11.3 17.8 0.2 10.7 17.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4686) LPP PF04728.13 BAJ50986.1 - 0.14 12.6 3.4 3.6 8.1 0.4 3.5 1 1 2 3 3 3 0 Lipoprotein leucine-zipper TMPIT PF07851.13 BAJ50986.1 - 0.14 11.4 10.5 0.72 9.0 2.8 2.2 1 1 1 2 2 2 0 TMPIT-like protein CLZ PF16526.5 BAJ50986.1 - 0.15 12.4 15.8 2.2 8.7 1.7 4.0 1 1 3 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels APG17 PF04108.12 BAJ50986.1 - 0.16 11.0 14.3 0.38 9.8 5.6 2.1 1 1 1 2 2 2 0 Autophagy protein Apg17 Syntaxin-6_N PF09177.11 BAJ50986.1 - 0.17 12.5 13.4 0.87 10.2 6.2 3.2 1 1 1 2 2 2 0 Syntaxin 6, N-terminal YabA PF06156.13 BAJ50986.1 - 0.17 12.5 16.9 2.4 8.9 4.8 3.3 1 1 2 3 3 3 0 Initiation control protein YabA FlaC_arch PF05377.11 BAJ50986.1 - 0.18 12.2 12.6 11 6.5 0.3 4.4 1 1 4 5 5 4 0 Flagella accessory protein C (FlaC) DUF4041 PF13250.6 BAJ50986.1 - 0.21 11.5 2.8 4.4 7.2 0.1 3.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4041) ERM PF00769.19 BAJ50986.1 - 0.21 11.3 18.6 1.4 8.7 18.6 1.9 1 1 0 1 1 1 0 Ezrin/radixin/moesin family Sec8_exocyst PF04048.14 BAJ50986.1 - 0.21 11.4 10.7 0.31 10.9 2.2 2.6 1 1 2 3 3 3 0 Sec8 exocyst complex component specific domain Baculo_PEP_C PF04513.12 BAJ50986.1 - 0.22 11.6 14.5 0.63 10.1 8.9 2.3 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus LUC7 PF03194.15 BAJ50986.1 - 0.22 11.2 7.0 0.36 10.5 7.0 1.3 1 1 0 1 1 1 0 LUC7 N_terminus HrpB7 PF09486.10 BAJ50986.1 - 0.25 11.7 12.2 0.74 10.2 5.8 2.3 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) Ead_Ea22 PF13935.6 BAJ50986.1 - 0.27 11.9 8.3 0.041 14.5 3.4 2.0 1 1 1 2 2 2 0 Ead/Ea22-like protein DUF4527 PF15030.6 BAJ50986.1 - 0.29 10.5 14.8 0.079 12.4 7.3 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF4527) Vps5 PF09325.10 BAJ50986.1 - 0.31 10.6 11.8 0.11 12.0 1.7 2.4 1 1 1 2 2 2 0 Vps5 C terminal like Syntaxin_2 PF14523.6 BAJ50986.1 - 0.31 11.4 12.8 4.6 7.7 12.2 2.5 1 1 0 1 1 1 0 Syntaxin-like protein DUF16 PF01519.16 BAJ50986.1 - 0.32 11.5 9.0 1.2 9.7 3.8 2.8 1 1 1 2 2 2 0 Protein of unknown function DUF16 MscS_porin PF12795.7 BAJ50986.1 - 0.33 10.5 30.6 0.17 11.4 17.7 2.2 1 1 0 2 2 2 0 Mechanosensitive ion channel porin domain DUF4988 PF16378.5 BAJ50986.1 - 0.35 10.5 4.1 3.8 7.1 0.2 2.5 2 1 0 2 2 2 0 Domain of unknown function YkyA PF10368.9 BAJ50986.1 - 0.35 10.5 15.7 0.7 9.5 15.7 1.5 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein Mce4_CUP1 PF11887.8 BAJ50986.1 - 0.37 10.2 4.1 0.56 9.6 3.7 1.5 1 1 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative KxDL PF10241.9 BAJ50986.1 - 0.38 11.0 16.1 0.49 10.7 5.0 3.5 1 1 2 4 4 4 0 Uncharacterized conserved protein CCDC106 PF15794.5 BAJ50986.1 - 0.38 10.4 9.0 0.61 9.8 8.1 1.8 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 106 DUF1664 PF07889.12 BAJ50986.1 - 0.39 10.8 11.8 0.23 11.5 3.2 3.2 2 1 0 3 3 2 0 Protein of unknown function (DUF1664) Seryl_tRNA_N PF02403.22 BAJ50986.1 - 0.39 11.0 10.9 1.6 9.0 6.1 2.5 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain WEMBL PF05701.11 BAJ50986.1 - 0.41 9.3 11.6 1.2 7.8 11.6 1.6 1 1 0 1 1 1 0 Weak chloroplast movement under blue light zf-C4H2 PF10146.9 BAJ50986.1 - 0.44 10.8 10.2 35 4.6 10.2 2.4 1 1 0 1 1 1 0 Zinc finger-containing protein GrpE PF01025.19 BAJ50986.1 - 0.44 10.2 14.3 1.8 8.2 0.7 3.4 1 1 3 4 4 4 0 GrpE Cep57_MT_bd PF06657.13 BAJ50986.1 - 0.54 10.7 13.6 1.4 9.5 3.0 3.6 1 1 2 3 3 3 0 Centrosome microtubule-binding domain of Cep57 Cob_adeno_trans PF01923.18 BAJ50986.1 - 0.8 9.8 6.8 3.6 7.7 4.0 2.3 1 1 1 2 2 2 0 Cobalamin adenosyltransferase Uso1_p115_C PF04871.13 BAJ50986.1 - 0.81 10.1 14.4 2.1 8.7 4.0 2.6 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Csm1_N PF18504.1 BAJ50986.1 - 0.83 10.0 15.5 0.37 11.2 1.3 3.8 1 1 2 4 4 3 0 Csm1 N-terminal domain HemX PF04375.14 BAJ50986.1 - 0.94 8.7 17.3 0.71 9.1 7.1 2.3 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase She9_MDM33 PF05546.11 BAJ50986.1 - 0.94 9.2 12.1 1.2 8.9 8.0 2.5 1 1 2 3 3 3 0 She9 / Mdm33 family ABC_tran_CTD PF16326.5 BAJ50986.1 - 0.98 9.7 17.4 0.63 10.3 3.0 3.5 1 1 3 4 4 4 0 ABC transporter C-terminal domain Rho_Binding PF08912.11 BAJ50986.1 - 0.99 10.3 16.5 2.2 9.1 1.1 3.5 1 1 2 3 3 3 0 Rho Binding Cep57_CLD_2 PF14197.6 BAJ50986.1 - 1.1 9.4 24.7 0.85 9.7 8.6 3.2 1 1 2 3 3 3 0 Centrosome localisation domain of PPC89 Fzo_mitofusin PF04799.13 BAJ50986.1 - 1.1 8.8 9.2 0.39 10.2 3.8 2.4 2 0 0 2 2 2 0 fzo-like conserved region FUSC PF04632.12 BAJ50986.1 - 1.1 7.6 13.0 0.95 7.9 2.5 1.9 1 1 1 2 2 2 0 Fusaric acid resistance protein family DUF2203 PF09969.9 BAJ50986.1 - 1.2 9.9 9.2 64 4.3 9.2 2.6 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Rootletin PF15035.6 BAJ50986.1 - 1.2 9.1 21.7 2.9 7.9 21.5 1.8 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion HALZ PF02183.18 BAJ50986.1 - 1.2 9.4 20.4 0.53 10.5 2.2 5.0 4 2 3 7 7 4 0 Homeobox associated leucine zipper Noelin-1 PF12308.8 BAJ50986.1 - 1.2 9.1 11.2 3 7.9 1.4 2.8 1 1 1 3 3 3 0 Neurogenesis glycoprotein DASH_Dam1 PF08653.10 BAJ50986.1 - 1.3 8.9 5.5 30 4.5 0.0 4.0 1 1 2 3 3 3 0 DASH complex subunit Dam1 YlqD PF11068.8 BAJ50986.1 - 1.3 9.4 15.7 3.8 7.9 7.1 2.5 1 1 2 3 3 3 0 YlqD protein NPV_P10 PF05531.12 BAJ50986.1 - 1.4 9.4 5.3 8.3 7.0 2.0 3.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Prefoldin PF02996.17 BAJ50986.1 - 1.4 8.8 17.4 2.6 8.0 0.4 3.9 2 1 1 4 4 3 0 Prefoldin subunit Laminin_II PF06009.12 BAJ50986.1 - 1.5 8.8 10.3 1.8 8.6 5.2 2.2 1 1 1 2 2 2 0 Laminin Domain II Macoilin PF09726.9 BAJ50986.1 - 1.6 7.2 16.8 0.52 8.8 3.2 2.1 1 1 1 2 2 2 0 Macoilin family XhlA PF10779.9 BAJ50986.1 - 1.7 8.9 7.8 15 5.9 0.4 2.7 1 1 1 2 2 2 0 Haemolysin XhlA Exonuc_VII_L PF02601.15 BAJ50986.1 - 1.9 8.0 20.5 41 3.6 20.5 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF745 PF05335.13 BAJ50986.1 - 1.9 8.1 13.2 1.7 8.3 4.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF745) EMP24_GP25L PF01105.24 BAJ50986.1 - 2.2 8.2 17.3 1.4 8.8 5.5 3.6 2 1 2 4 4 3 0 emp24/gp25L/p24 family/GOLD PI3K_P85_iSH2 PF16454.5 BAJ50986.1 - 2.3 7.8 18.2 4.3e+02 0.4 18.2 2.7 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Tho2 PF11262.8 BAJ50986.1 - 2.4 7.3 8.8 7.5 5.7 8.4 2.1 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 YscO PF07321.12 BAJ50986.1 - 2.7 7.9 14.7 0.41 10.6 6.8 2.4 1 1 0 2 2 2 0 Type III secretion protein YscO DUF4298 PF14131.6 BAJ50986.1 - 3 7.8 15.6 9.9 6.2 0.5 3.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4298) CALCOCO1 PF07888.11 BAJ50986.1 - 3.1 6.6 19.0 6.6 5.5 9.2 1.9 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like HAUS6_N PF14661.6 BAJ50986.1 - 3.4 7.2 15.1 7.6 6.0 1.6 2.2 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus DUF4140 PF13600.6 BAJ50986.1 - 4 8.0 12.5 1.8e+02 2.6 0.2 3.6 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DASH_Spc34 PF08657.10 BAJ50986.1 - 4 7.2 19.3 5.8 6.6 6.7 2.7 1 1 1 2 2 2 0 DASH complex subunit Spc34 Fmp27_WPPW PF10359.9 BAJ50986.1 - 4.3 6.1 13.5 1.2e+02 1.3 13.4 2.1 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain CENP-H PF05837.12 BAJ50986.1 - 4.3 7.8 17.2 3 8.3 1.5 2.6 1 1 2 3 3 3 0 Centromere protein H (CENP-H) LXG PF04740.12 BAJ50986.1 - 4.6 6.9 12.6 1 9.0 2.3 2.8 1 1 2 3 3 3 0 LXG domain of WXG superfamily Paralemmin PF03285.15 BAJ50986.1 - 4.8 6.7 6.3 5.3 6.5 5.5 1.4 1 1 0 1 1 1 0 Paralemmin Swi5 PF07061.11 BAJ50986.1 - 5.1 7.3 12.7 7.5 6.7 2.2 3.8 1 1 1 2 2 2 0 Swi5 Cluap1 PF10234.9 BAJ50986.1 - 5.4 6.3 17.7 2.2 7.6 13.9 1.9 1 1 1 2 2 2 0 Clusterin-associated protein-1 Fungal_TACC PF12709.7 BAJ50986.1 - 5.5 7.5 15.9 10 6.6 0.5 3.9 1 1 2 3 3 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins IFT20 PF14931.6 BAJ50986.1 - 5.6 7.2 15.5 2.4 8.4 7.4 2.7 1 1 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 DUF1192 PF06698.11 BAJ50986.1 - 6.1 7.0 7.8 12 6.0 0.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) Snapin_Pallidin PF14712.6 BAJ50986.1 - 6.3 7.3 18.6 0.19 12.2 8.4 2.6 1 1 1 2 2 2 0 Snapin/Pallidin SYCE1 PF15233.6 BAJ50986.1 - 6.8 6.7 17.3 1.9 8.6 2.7 2.1 1 1 1 2 2 2 0 Synaptonemal complex central element protein 1 ThiF PF00899.21 BAJ50987.1 - 5.6e-69 232.2 0.0 8e-69 231.7 0.0 1.1 1 0 0 1 1 1 1 ThiF family Rhodanese PF00581.20 BAJ50987.1 - 5.5e-17 62.2 0.0 1e-16 61.4 0.0 1.5 1 0 0 1 1 1 1 Rhodanese-like domain Shikimate_DH PF01488.20 BAJ50987.1 - 0.0036 17.4 0.5 0.15 12.1 0.1 2.8 2 1 0 3 3 3 1 Shikimate / quinate 5-dehydrogenase Ldh_1_N PF00056.23 BAJ50987.1 - 0.054 13.6 0.9 0.12 12.4 0.9 1.7 1 1 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 BAJ50987.1 - 0.17 12.1 0.4 0.93 9.8 0.4 2.0 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ABC_tran PF00005.27 BAJ50988.1 - 1.5e-31 109.7 0.0 2e-31 109.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 BAJ50988.1 - 1.1e-07 31.5 0.1 0.00044 19.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAJ50988.1 - 3.4e-06 27.1 0.4 0.047 13.5 0.5 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 BAJ50988.1 - 0.00022 21.5 0.2 0.0013 19.0 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ50988.1 - 0.0005 20.5 0.7 0.0011 19.4 0.7 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 BAJ50988.1 - 0.00078 19.1 0.0 0.0015 18.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain IstB_IS21 PF01695.17 BAJ50988.1 - 0.001 18.9 0.1 1.4 8.6 0.0 2.7 2 1 1 3 3 3 2 IstB-like ATP binding protein AAA_23 PF13476.6 BAJ50988.1 - 0.0013 19.2 0.3 0.0051 17.3 0.3 2.0 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 BAJ50988.1 - 0.0028 17.6 0.4 0.83 9.5 0.0 2.2 2 0 0 2 2 2 1 NTPase AAA_30 PF13604.6 BAJ50988.1 - 0.0043 16.8 0.2 0.0097 15.6 0.2 1.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 BAJ50988.1 - 0.0058 16.6 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase cobW PF02492.19 BAJ50988.1 - 0.011 15.3 0.1 0.023 14.3 0.1 1.5 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 BAJ50988.1 - 0.016 15.2 0.0 0.022 14.7 0.0 1.6 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_18 PF13238.6 BAJ50988.1 - 0.016 15.7 0.2 0.06 13.9 0.2 2.0 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 BAJ50988.1 - 0.017 15.4 0.0 0.39 11.0 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PhoH PF02562.16 BAJ50988.1 - 0.018 14.5 0.0 0.04 13.4 0.0 1.6 2 0 0 2 2 2 0 PhoH-like protein AAA_33 PF13671.6 BAJ50988.1 - 0.021 15.0 0.4 0.037 14.2 0.4 1.8 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 BAJ50988.1 - 0.021 14.0 0.0 0.081 12.1 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain T2SSE PF00437.20 BAJ50988.1 - 0.027 13.5 0.0 0.079 12.0 0.0 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_25 PF13481.6 BAJ50988.1 - 0.038 13.6 0.0 0.24 10.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 BAJ50988.1 - 0.04 13.6 0.0 0.81 9.3 0.0 2.1 1 1 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 BAJ50988.1 - 0.052 13.5 0.1 0.12 12.3 0.1 1.7 2 0 0 2 2 2 0 NACHT domain MMR_HSR1 PF01926.23 BAJ50988.1 - 0.055 13.6 0.8 0.44 10.6 0.1 2.3 2 1 0 2 2 2 0 50S ribosome-binding GTPase SRPRB PF09439.10 BAJ50988.1 - 0.073 12.5 0.0 0.92 8.9 0.0 2.2 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit AAA_24 PF13479.6 BAJ50988.1 - 0.08 12.7 0.1 0.13 11.9 0.0 1.5 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 BAJ50988.1 - 0.14 11.9 0.1 0.83 9.4 0.1 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_14 PF13173.6 BAJ50988.1 - 0.15 12.1 0.0 0.26 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain NPCBM_assoc PF10633.9 BAJ50989.1 - 1.6e-12 47.5 9.0 0.013 15.7 0.2 6.1 5 2 0 5 5 5 4 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 BAJ50989.1 - 1.2e-11 44.8 17.3 0.0014 18.9 0.3 5.5 4 2 2 6 6 6 4 CARDB PHTB1_C PF14728.6 BAJ50989.1 - 4.1e-06 26.2 4.2 0.035 13.2 0.1 3.7 4 0 0 4 4 4 2 PTHB1 C-terminus TRAP_beta PF05753.14 BAJ50989.1 - 4.1e-06 26.3 6.0 0.1 12.0 0.2 4.4 4 1 0 4 4 4 3 Translocon-associated protein beta (TRAPB) FixG_C PF11614.8 BAJ50989.1 - 2.5e-05 24.5 0.9 0.74 10.0 0.0 4.7 4 1 0 4 4 4 1 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF11 PF01345.18 BAJ50989.1 - 0.0025 18.1 2.5 0.0025 18.1 2.5 5.0 5 2 0 5 5 5 1 Domain of unknown function DUF11 DUF2790 PF10976.8 BAJ50989.1 - 0.045 13.8 0.1 4.1 7.5 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2790) Pur_ac_phosph_N PF16656.5 BAJ50989.1 - 0.11 13.1 0.6 1.6 9.4 0.0 2.8 2 1 0 2 2 2 0 Purple acid Phosphatase, N-terminal domain FtsX PF02687.21 BAJ50990.1 - 4.9e-16 59.0 2.4 4.9e-16 59.0 2.4 3.1 3 0 0 3 3 3 1 FtsX-like permease family MacB_PCD PF12704.7 BAJ50990.1 - 3.7e-15 56.8 7.9 3.7e-15 56.8 7.9 2.6 3 0 0 3 3 3 1 MacB-like periplasmic core domain DUF1743 PF08489.11 BAJ50991.1 - 2.6e-31 108.1 0.0 5.5e-30 103.8 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.25 BAJ50991.1 - 1.1e-10 41.3 1.5 2.1e-10 40.4 1.5 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain zf_Rg PF17915.1 BAJ50991.1 - 0.0015 17.9 1.7 0.0043 16.4 1.7 1.7 1 0 0 1 1 1 1 Reverse gyrase zinc finger Zn_Tnp_IS1595 PF12760.7 BAJ50991.1 - 0.0022 17.9 0.5 0.005 16.8 0.5 1.6 1 0 0 1 1 1 1 Transposase zinc-ribbon domain tRNA_anti_2 PF13742.6 BAJ50991.1 - 0.0028 17.8 0.0 0.0051 17.0 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DZR PF12773.7 BAJ50991.1 - 0.0072 16.3 0.3 0.016 15.2 0.3 1.5 1 0 0 1 1 1 1 Double zinc ribbon zf_UBZ PF18439.1 BAJ50991.1 - 0.016 14.7 1.0 0.68 9.6 0.1 2.4 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zinc_ribbon_2 PF13240.6 BAJ50991.1 - 0.052 13.3 6.0 0.65 9.8 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain C1_1 PF00130.22 BAJ50991.1 - 0.065 13.1 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn-ribbon_8 PF09723.10 BAJ50991.1 - 0.067 13.3 0.9 10 6.4 0.1 3.1 2 0 0 2 2 2 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 BAJ50991.1 - 0.083 12.8 1.8 0.18 11.8 1.8 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-FPG_IleRS PF06827.14 BAJ50991.1 - 0.16 11.8 4.1 1.7 8.6 4.3 2.4 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS zf-ribbon_3 PF13248.6 BAJ50991.1 - 0.17 11.3 0.9 16 5.1 0.1 2.8 2 0 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 BAJ50991.1 - 1.2 8.9 8.3 4.5 7.0 7.7 2.3 2 1 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain TF_Zn_Ribbon PF08271.12 BAJ50991.1 - 6.5 6.4 7.2 3.7 7.1 2.7 2.8 3 1 0 3 3 3 0 TFIIB zinc-binding ACT PF01842.25 BAJ50992.1 - 2.2e-08 33.7 0.0 4.5e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 ACT domain V4R PF02830.18 BAJ50992.1 - 1.7e-06 28.0 0.2 3.4e-06 27.0 0.2 1.4 1 0 0 1 1 1 1 V4R domain ACT_4 PF13291.6 BAJ50992.1 - 0.00058 20.4 0.5 0.0026 18.3 0.5 2.0 1 1 0 1 1 1 1 ACT domain FAM178 PF14816.6 BAJ50992.1 - 0.11 11.4 0.1 0.16 10.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function, FAM178 PhoU PF01895.19 BAJ50993.1 - 1.7e-13 50.9 4.6 9.1e-08 32.5 0.9 2.5 2 0 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 BAJ50993.1 - 1.1e-05 25.2 0.1 3.6e-05 23.6 0.1 1.9 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin DUF948 PF06103.11 BAJ50993.1 - 0.1 12.9 0.8 2.7 8.3 0.2 2.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Zf_RING PF16744.5 BAJ50993.1 - 0.21 11.7 0.0 0.41 10.8 0.0 1.5 1 0 0 1 1 1 0 KIAA1045 RING finger ICL PF00463.21 BAJ50994.1 - 8.1e-98 328.2 0.1 1.2e-51 175.8 0.0 2.0 1 1 1 2 2 2 2 Isocitrate lyase family PEP_mutase PF13714.6 BAJ50994.1 - 3e-16 59.6 0.0 4.6e-16 59.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase Malate_synthase PF01274.22 BAJ50995.1 - 6.2e-176 585.7 0.0 7.5e-176 585.5 0.0 1.0 1 0 0 1 1 1 1 Malate synthase HpcH_HpaI PF03328.14 BAJ50995.1 - 0.0016 17.6 0.0 0.06 12.5 0.0 2.5 2 1 0 2 2 2 2 HpcH/HpaI aldolase/citrate lyase family UPF0020 PF01170.18 BAJ50996.1 - 1.9e-30 106.1 0.0 2.8e-30 105.5 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 BAJ50996.1 - 8.6e-20 71.3 0.2 1.6e-19 70.4 0.2 1.4 1 0 0 1 1 1 1 THUMP domain Methyltransf_31 PF13847.6 BAJ50996.1 - 1.8e-07 31.1 0.0 2.9e-06 27.2 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ50996.1 - 0.00013 22.5 0.0 0.00038 21.1 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 BAJ50996.1 - 0.00066 19.3 0.0 0.0011 18.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_15 PF09445.10 BAJ50996.1 - 0.0056 16.3 0.0 0.02 14.5 0.0 1.8 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase MFS_1 PF07690.16 BAJ50997.1 - 0.1 11.5 12.2 0.3 10.0 12.3 1.8 1 1 0 1 1 1 0 Major Facilitator Superfamily DUF3382 PF11862.8 BAJ50997.1 - 0.18 12.1 0.3 0.18 12.1 0.3 2.4 2 2 0 2 2 2 0 Domain of unknown function (DUF3382) MARVEL PF01284.23 BAJ50997.1 - 0.18 11.8 5.0 0.5 10.4 5.0 1.8 1 1 0 1 1 1 0 Membrane-associating domain MarR PF01047.22 BAJ50998.1 - 1.3e-05 25.0 0.1 0.00035 20.4 0.1 2.4 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 BAJ50998.1 - 3.9e-05 23.4 0.1 0.00011 22.1 0.1 1.7 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 BAJ50998.1 - 6.3e-05 22.9 0.7 0.00013 21.9 0.1 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_20 PF12840.7 BAJ50998.1 - 0.0013 18.8 0.8 0.0026 17.8 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain TrmB PF01978.19 BAJ50998.1 - 0.0025 17.6 0.0 0.0043 16.9 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_47 PF16221.5 BAJ50998.1 - 0.011 15.2 0.0 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 winged helix-turn-helix BAT PF15915.5 BAJ50998.1 - 0.012 15.5 0.8 0.82 9.5 0.1 2.3 2 1 0 2 2 2 0 GAF and HTH_10 associated domain Reductase_C PF14759.6 BAJ50998.1 - 0.013 16.1 0.0 0.037 14.6 0.0 1.8 1 0 0 1 1 1 0 Reductase C-terminal HTH_5 PF01022.20 BAJ50998.1 - 0.013 15.3 0.5 0.087 12.7 0.1 2.3 2 1 1 3 3 3 0 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 BAJ50998.1 - 0.013 15.8 0.1 0.03 14.7 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_IclR PF09339.10 BAJ50998.1 - 0.019 14.8 0.2 0.052 13.4 0.2 1.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain HxlR PF01638.17 BAJ50998.1 - 0.026 14.4 0.1 0.048 13.5 0.1 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_27 PF13463.6 BAJ50998.1 - 0.036 14.6 0.1 0.073 13.6 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF4423 PF14394.6 BAJ50998.1 - 0.038 13.7 0.0 0.075 12.7 0.0 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) HTH_34 PF13601.6 BAJ50998.1 - 0.039 14.1 0.1 0.21 11.8 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_45 PF14947.6 BAJ50998.1 - 0.067 13.2 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix z-alpha PF02295.17 BAJ50998.1 - 0.095 12.8 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain Replic_Relax PF13814.6 BAJ50998.1 - 0.17 12.0 1.0 0.33 11.0 0.1 1.8 2 0 0 2 2 2 0 Replication-relaxation Proteasome PF00227.26 BAJ50999.1 - 2.6e-47 160.8 0.1 2.8e-47 160.6 0.1 1.0 1 0 0 1 1 1 1 Proteasome subunit Proteasome PF00227.26 BAJ51000.1 - 1.4e-37 129.0 0.0 1.8e-37 128.7 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit AsnC_trans_reg PF01037.21 BAJ51001.1 - 2.4e-13 49.8 0.9 2.6e-13 49.7 0.9 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain GYD PF08734.11 BAJ51001.1 - 0.021 14.8 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 GYD domain DUF641 PF04859.12 BAJ51001.1 - 0.057 13.8 0.2 0.081 13.3 0.2 1.3 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) Lactamase_B PF00753.27 BAJ51002.1 - 7.1e-29 101.2 0.8 8.4e-29 101.0 0.8 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 BAJ51002.1 - 3e-05 23.6 0.0 4e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Cytochrom_D1 PF02239.16 BAJ51002.1 - 0.083 11.4 0.0 0.12 10.9 0.0 1.2 1 0 0 1 1 1 0 Cytochrome D1 heme domain UDG PF03167.19 BAJ51003.1 - 6.5e-32 110.7 0.0 7.7e-32 110.4 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily MFS_1 PF07690.16 BAJ51004.1 - 3.8e-35 121.4 53.5 1.1e-30 106.8 36.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 BAJ51004.1 - 0.00029 19.4 26.7 0.0026 16.2 26.7 2.2 1 1 0 1 1 1 1 Transmembrane secretion effector MFS_1_like PF12832.7 BAJ51004.1 - 0.014 14.3 25.4 0.12 11.2 15.9 2.1 2 0 0 2 2 2 0 MFS_1 like family GT87 PF09594.10 BAJ51005.1 - 2.3e-05 24.3 27.3 2.3e-05 24.3 27.3 2.8 2 1 1 3 3 3 1 Glycosyltransferase family 87 PALP PF00291.25 BAJ51006.1 - 4e-66 223.4 0.0 4.6e-66 223.2 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme NAD_binding_7 PF13241.6 BAJ51006.1 - 0.0028 18.0 0.0 0.022 15.2 0.0 2.1 2 0 0 2 2 2 1 Putative NAD(P)-binding MFS_1 PF07690.16 BAJ51007.1 - 7.8e-19 67.8 59.0 5.4e-18 65.0 45.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 BAJ51007.1 - 0.0028 16.6 0.2 0.0028 16.6 0.2 3.5 3 2 0 3 3 3 2 Sugar (and other) transporter B12D PF06522.11 BAJ51007.1 - 0.14 11.9 1.4 26 4.7 1.6 2.7 2 0 0 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit OATP PF03137.20 BAJ51007.1 - 2.2 6.5 12.0 0.045 12.0 1.7 2.5 2 1 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family PhoU PF01895.19 BAJ51008.1 - 1.1e-10 41.8 7.1 4.9e-07 30.1 0.6 2.9 3 1 0 3 3 3 2 PhoU domain MazE_antitoxin PF04014.18 BAJ51008.1 - 9.7e-06 25.4 0.3 3e-05 23.8 0.1 1.9 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin Nitroreductase PF00881.24 BAJ51009.1 - 1.6e-20 73.8 0.0 3.3e-09 37.0 0.0 2.3 2 0 0 2 2 2 2 Nitroreductase family ThiI PF02568.14 BAJ51010.1 - 1.1e-54 185.1 0.0 2.2e-54 184.0 0.0 1.5 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 BAJ51010.1 - 1.8e-06 27.6 0.1 0.026 14.0 0.0 2.6 3 0 0 3 3 3 2 Queuosine biosynthesis protein QueC THUMP PF02926.17 BAJ51010.1 - 1.3e-05 25.4 0.4 4.8e-05 23.5 0.1 2.2 2 0 0 2 2 2 1 THUMP domain tRNA_Me_trans PF03054.16 BAJ51010.1 - 6e-05 22.0 0.1 0.00025 20.0 0.0 2.0 2 0 0 2 2 2 1 tRNA methyl transferase ATP_bind_3 PF01171.20 BAJ51010.1 - 0.078 12.7 0.2 2.5 7.8 0.2 2.4 1 1 0 1 1 1 0 PP-loop family Glyco_hydro_cc PF11790.8 BAJ51010.1 - 0.12 12.0 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase catalytic core Aldedh PF00171.22 BAJ51011.1 - 7.8e-165 548.8 0.0 9.2e-165 548.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 BAJ51011.1 - 0.009 15.5 0.0 0.35 10.3 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF1487) Methyltransf_11 PF08241.12 BAJ51012.1 - 6.8e-07 29.8 0.0 9.3e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAJ51012.1 - 1.8e-06 27.9 0.0 4.3e-06 26.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAJ51012.1 - 0.00015 22.5 0.0 0.00023 21.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ51012.1 - 0.00016 22.3 0.0 0.00022 21.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain DRE2_N PF16803.5 BAJ51012.1 - 0.00024 21.3 0.0 0.0003 21.1 0.0 1.2 1 0 0 1 1 1 1 Fe-S cluster assembly protein DRE2 N-terminus Methyltransf_8 PF05148.15 BAJ51012.1 - 0.00029 20.8 0.0 0.00034 20.5 0.0 1.1 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_31 PF13847.6 BAJ51012.1 - 0.00029 20.7 0.0 0.00041 20.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 BAJ51012.1 - 0.012 14.9 0.0 0.021 14.2 0.0 1.5 1 1 1 2 2 2 0 ubiE/COQ5 methyltransferase family MTS PF05175.14 BAJ51012.1 - 0.015 14.9 0.0 0.022 14.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain MarC PF01914.17 BAJ51013.1 - 1.9e-37 128.6 15.7 3.2e-37 127.9 15.7 1.3 1 1 0 1 1 1 1 MarC family integral membrane protein QueT PF06177.11 BAJ51014.1 - 1.4e-11 45.0 12.7 1.9e-11 44.5 12.7 1.2 1 0 0 1 1 1 1 QueT transporter AA_permease_C PF13906.6 BAJ51014.1 - 0.063 13.4 0.1 0.063 13.4 0.1 2.6 3 1 0 3 3 3 0 C-terminus of AA_permease NCE101 PF11654.8 BAJ51014.1 - 0.24 11.1 0.6 35 4.2 0.0 2.7 2 0 0 2 2 2 0 Non-classical export protein 1 COX3 PF00510.18 BAJ51015.1 - 6.3e-23 81.9 9.8 8.2e-23 81.6 9.8 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III IF-2B PF01008.17 BAJ51016.1 - 2.7e-29 102.3 0.1 1.2e-28 100.1 0.1 1.8 1 1 0 1 1 1 1 Initiation factor 2 subunit family ADH_zinc_N PF00107.26 BAJ51017.1 - 2.2e-32 111.8 0.1 3.7e-32 111.1 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 BAJ51017.1 - 2.5e-28 98.1 0.0 5.1e-28 97.1 0.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 BAJ51017.1 - 1.5e-21 77.8 0.0 2.6e-21 77.0 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 BAJ51017.1 - 3.6e-05 23.2 0.6 5.6e-05 22.5 0.6 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Glu_dehyd_C PF16912.5 BAJ51017.1 - 3.7e-05 23.3 0.1 5.4e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ACP_syn_III_C PF08541.10 BAJ51017.1 - 0.17 12.1 0.2 0.47 10.6 0.1 1.8 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CN_hydrolase PF00795.22 BAJ51018.1 - 4.3e-26 91.8 0.1 5.7e-26 91.4 0.1 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase AP_endonuc_2 PF01261.24 BAJ51019.1 - 5e-40 137.2 0.0 5.9e-40 136.9 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel VirD1 PF07328.11 BAJ51019.1 - 0.04 13.9 0.0 1.1 9.2 0.0 2.3 2 0 0 2 2 2 0 T-DNA border endonuclease VirD1 Ala_racemase_N PF01168.20 BAJ51019.1 - 0.069 12.8 0.1 0.38 10.3 0.0 2.0 2 0 0 2 2 2 0 Alanine racemase, N-terminal domain DUF2124 PF09897.9 BAJ51019.1 - 0.12 12.3 0.1 0.54 10.1 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2124) Glyoxalase PF00903.25 BAJ51020.1 - 3.4e-17 62.8 0.0 1.8e-07 31.4 0.0 2.2 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 BAJ51020.1 - 0.028 14.7 0.0 12 6.2 0.0 3.4 2 2 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Peptidase_S24 PF00717.23 BAJ51021.1 - 2.9e-10 40.0 0.6 4.4e-10 39.4 0.6 1.3 1 0 0 1 1 1 1 Peptidase S24-like CarboxypepD_reg PF13620.6 BAJ51022.1 - 1.8e-39 133.9 59.9 1.1e-07 32.0 4.2 10.3 7 3 3 10 10 10 9 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 BAJ51022.1 - 5.7e-20 71.1 24.5 6.8e-05 22.8 0.2 9.0 8 1 1 9 9 9 6 CarboxypepD_reg-like domain SpaA PF17802.1 BAJ51022.1 - 1.7e-12 47.5 20.8 0.0022 18.3 0.0 9.2 8 2 1 9 9 9 3 Prealbumin-like fold domain Big_1 PF02369.16 BAJ51022.1 - 6.3e-12 45.3 31.2 0.00016 21.6 0.2 7.4 7 0 0 7 7 7 4 Bacterial Ig-like domain (group 1) MG4 PF17789.1 BAJ51022.1 - 6.3e-11 42.3 10.2 0.024 14.8 0.0 7.0 7 0 0 7 7 7 3 Macroglobulin domain MG4 DUF2012 PF09430.10 BAJ51022.1 - 2.3e-10 40.6 1.4 0.17 12.0 0.1 6.3 4 2 2 6 6 6 1 Protein of unknown function (DUF2012) DUF4198 PF10670.9 BAJ51022.1 - 1.2e-08 35.6 2.9 0.0073 16.7 0.0 4.8 5 0 0 5 5 5 2 Domain of unknown function (DUF4198) bMG3 PF11974.8 BAJ51022.1 - 2.5e-06 27.4 12.5 0.18 11.8 0.1 7.5 6 3 2 8 8 8 2 Bacterial alpha-2-macroglobulin MG3 domain SdrD_B PF17210.3 BAJ51022.1 - 2.2e-05 24.6 30.0 0.77 10.0 0.1 8.2 7 2 2 9 9 9 3 SdrD B-like domain DUF5013 PF16405.5 BAJ51022.1 - 0.0016 18.7 0.1 13 6.1 0.0 4.8 3 1 1 5 5 4 0 Domain of unknown function (DUF5013) DUF1416 PF07210.12 BAJ51022.1 - 0.017 15.0 5.9 0.4 10.6 0.0 4.9 5 0 0 5 5 5 0 Protein of unknown function (DUF1416) DUF824 PF05688.11 BAJ51022.1 - 0.019 14.8 14.2 0.57 10.0 0.2 6.2 7 1 1 8 8 8 0 Salmonella repeat of unknown function (DUF824) Dioxygenase_C PF00775.21 BAJ51022.1 - 0.069 12.6 0.8 19 4.6 0.0 3.8 5 0 0 5 5 5 0 Dioxygenase Y_Y_Y PF07495.13 BAJ51022.1 - 0.078 12.9 0.6 8.4 6.4 0.0 3.7 4 0 0 4 4 3 0 Y_Y_Y domain Glyco_hydro2_C5 PF18565.1 BAJ51022.1 - 0.51 10.2 0.0 0.51 10.2 0.0 5.5 7 0 0 7 7 7 0 Glycoside hydrolase family 2 C-terminal domain 5 Sdh5 PF03937.16 BAJ51023.1 - 0.024 14.6 0.4 0.066 13.2 0.1 1.8 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase DUF4515 PF14988.6 BAJ51023.1 - 0.044 13.6 0.7 0.068 13.0 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4515) FGGY_N PF00370.21 BAJ51024.1 - 9.1e-31 107.3 0.0 2.7e-29 102.5 0.0 2.6 1 1 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 BAJ51024.1 - 4.1e-14 52.8 0.0 7.2e-14 52.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 BAJ51024.1 - 0.0059 16.1 0.3 0.14 11.7 0.0 2.2 2 0 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family UPRTase PF14681.6 BAJ51025.1 - 1.3e-48 165.2 0.1 1.4e-48 165.1 0.1 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 BAJ51025.1 - 1.4e-08 34.4 0.1 2.2e-08 33.8 0.1 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 BAJ51025.1 - 0.055 13.0 0.0 0.097 12.2 0.0 1.6 1 1 0 1 1 1 0 Phosphoribosyl transferase FAD_binding_2 PF00890.24 BAJ51026.1 - 1.1e-97 327.7 0.0 1.3e-97 327.5 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 BAJ51026.1 - 1.1e-08 34.9 0.6 1.5e-07 31.2 0.4 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.24 BAJ51026.1 - 1.5e-07 31.4 0.6 0.00012 21.8 0.1 2.7 3 0 0 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.14 BAJ51026.1 - 1.9e-07 30.1 1.5 4e-07 29.1 0.9 1.8 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 BAJ51026.1 - 2.6e-06 27.6 2.9 2.4e-05 24.4 2.1 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 BAJ51026.1 - 0.00015 21.1 0.8 0.00029 20.2 0.3 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 BAJ51026.1 - 0.00025 20.4 0.2 0.00036 19.9 0.2 1.2 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 BAJ51026.1 - 0.0087 15.3 3.1 0.014 14.7 1.7 2.0 2 0 0 2 2 2 1 Thi4 family GIDA PF01134.22 BAJ51026.1 - 0.018 14.1 0.6 0.068 12.2 0.8 1.7 2 0 0 2 2 2 0 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 BAJ51026.1 - 0.031 13.5 0.4 0.053 12.8 0.4 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 BAJ51026.1 - 0.1 11.9 4.7 0.35 10.1 0.7 2.9 3 0 0 3 3 3 0 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 BAJ51026.1 - 0.2 10.6 0.1 0.29 10.1 0.1 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Pyr_redox PF00070.27 BAJ51026.1 - 0.27 11.8 1.7 1.8 9.2 1.3 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF4131 PF13567.6 BAJ51027.1 - 0.043 13.5 3.4 0.048 13.3 3.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) ABC2_membrane_3 PF12698.7 BAJ51027.1 - 0.044 12.9 4.1 0.049 12.7 4.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DPM2 PF07297.12 BAJ51027.1 - 0.11 12.9 7.2 1.2 9.5 7.2 1.9 1 1 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) MaAIMP_sms PF16951.5 BAJ51027.1 - 0.17 11.7 0.2 0.17 11.7 0.2 1.7 2 0 0 2 2 2 0 Putative methionine and alanine importer, small subunit Internalin_N PF12354.8 BAJ51027.1 - 0.17 12.0 0.5 0.17 12.0 0.5 1.6 1 1 1 2 2 2 0 Bacterial adhesion/invasion protein N terminal TMEM43 PF07787.12 BAJ51027.1 - 0.65 9.3 3.3 0.7 9.2 3.3 1.0 1 0 0 1 1 1 0 Transmembrane protein 43 ABC2_membrane_2 PF12679.7 BAJ51027.1 - 0.89 8.8 9.6 1.1 8.4 9.6 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Tetraspanin PF00335.20 BAJ51027.1 - 1 9.0 2.9 1.3 8.7 2.9 1.1 1 0 0 1 1 1 0 Tetraspanin family RAMP4 PF06624.12 BAJ51027.1 - 1.3 9.2 3.6 13 5.9 0.5 2.2 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 DUF2207 PF09972.9 BAJ51027.1 - 3.2 6.4 4.8 3.6 6.3 4.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PIG-P PF08510.12 BAJ51027.1 - 5.1 7.0 6.9 87 3.1 6.9 2.0 1 1 0 1 1 1 0 PIG-P FixQ PF05545.11 BAJ51027.1 - 5.2 7.1 10.3 4.4 7.4 0.4 2.3 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ LexA_DNA_bind PF01726.16 BAJ51028.1 - 9.1e-05 22.2 0.0 0.00015 21.5 0.0 1.3 1 0 0 1 1 1 1 LexA DNA binding domain HTH_IclR PF09339.10 BAJ51028.1 - 0.005 16.6 0.0 0.0098 15.7 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain Radical_SAM PF04055.21 BAJ51029.1 - 8.5e-14 52.3 0.0 7.1e-13 49.3 0.0 2.3 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 BAJ51029.1 - 0.00086 19.3 0.0 0.0019 18.2 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain PspC PF04024.12 BAJ51030.1 - 4.3e-15 55.2 0.6 4.3e-15 55.2 0.6 2.3 2 1 0 2 2 2 1 PspC domain Sid-5 PF17204.3 BAJ51031.1 - 0.021 15.0 0.1 0.038 14.1 0.1 1.4 1 0 0 1 1 1 0 Sid-5 family RL10P_insert PF17777.1 BAJ51031.1 - 0.16 12.0 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Insertion domain in 60S ribosomal protein L10P Homoserine_dh PF00742.19 BAJ51032.1 - 5.8e-50 169.6 0.1 9.5e-50 168.9 0.1 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 BAJ51032.1 - 2.1e-11 44.5 0.1 4.4e-11 43.5 0.1 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 BAJ51032.1 - 0.0009 19.0 0.1 0.002 17.9 0.1 1.6 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AA_kinase PF00696.28 BAJ51033.1 - 2.1e-56 191.2 0.1 3.7e-56 190.4 0.1 1.4 1 0 0 1 1 1 1 Amino acid kinase family ACT_7 PF13840.6 BAJ51033.1 - 9.5e-23 79.8 0.9 1.6e-10 40.6 0.3 2.5 2 0 0 2 2 2 2 ACT domain ACT PF01842.25 BAJ51033.1 - 2.2e-21 75.3 0.8 2.1e-11 43.4 0.0 3.1 3 0 0 3 3 3 2 ACT domain ACT_6 PF13740.6 BAJ51033.1 - 0.011 15.7 1.4 0.16 12.0 0.1 2.8 3 0 0 3 3 3 0 ACT domain LytR_C PF13399.6 BAJ51033.1 - 0.07 14.1 0.0 4.2 8.4 0.0 2.8 2 0 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator DUF2283 PF10049.9 BAJ51036.1 - 4.4e-13 49.2 0.8 6e-13 48.8 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2283) SBP_bac_3 PF00497.20 BAJ51037.1 - 0.022 14.2 0.0 0.025 14.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 MS_channel PF00924.18 BAJ51039.1 - 6.8e-20 71.5 4.8 6.8e-20 71.5 4.8 1.9 2 0 0 2 2 2 1 Mechanosensitive ion channel Peptidase_M50 PF02163.22 BAJ51040.1 - 4.5e-19 68.7 7.5 1.9e-18 66.6 7.5 1.8 1 1 0 1 1 1 1 Peptidase family M50 PDZ_6 PF17820.1 BAJ51040.1 - 0.11 12.4 0.3 0.25 11.2 0.3 1.5 1 0 0 1 1 1 0 PDZ domain ATP_bind_3 PF01171.20 BAJ51041.1 - 3.6e-18 66.0 0.0 8e-18 64.8 0.0 1.6 1 1 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.16 BAJ51041.1 - 0.00016 20.6 0.0 0.00021 20.2 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase zn-ribbon_14 PF16503.5 BAJ51041.1 - 0.016 14.7 1.5 0.016 14.7 1.5 2.6 3 0 0 3 3 3 0 Zinc-ribbon PAPS_reduct PF01507.19 BAJ51041.1 - 0.018 15.1 0.0 0.039 14.0 0.0 1.6 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family DUF2845 PF11006.8 BAJ51041.1 - 0.15 12.2 0.1 0.28 11.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2845) RecR PF02132.15 BAJ51041.1 - 0.38 10.4 10.9 0.099 12.2 1.1 3.8 4 0 0 4 4 4 0 RecR protein FdhD-NarQ PF02634.15 BAJ51042.1 - 1.6e-52 178.6 0.1 1.8e-52 178.4 0.1 1.0 1 0 0 1 1 1 1 FdhD/NarQ family MoeA_N PF03453.17 BAJ51043.1 - 1.4e-40 138.6 0.0 2.6e-40 137.8 0.0 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 BAJ51043.1 - 2.1e-29 102.1 0.2 3.9e-29 101.2 0.2 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 BAJ51043.1 - 6e-17 61.6 0.6 2e-16 59.9 0.1 2.2 3 0 0 3 3 3 1 MoeA C-terminal region (domain IV) PBP_like PF12727.7 BAJ51044.1 - 2.5e-51 173.5 0.0 4.4e-51 172.8 0.0 1.3 1 0 0 1 1 1 1 PBP superfamily domain MoeA_N PF03453.17 BAJ51044.1 - 7.6e-45 152.5 0.8 1.6e-44 151.4 0.8 1.6 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 BAJ51044.1 - 5.3e-22 78.0 0.1 1.2e-21 76.9 0.1 1.6 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 BAJ51044.1 - 2.1e-10 40.6 0.1 8.7e-10 38.6 0.0 2.1 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) Phosphonate-bd PF12974.7 BAJ51044.1 - 3.1e-05 23.7 0.0 5.5e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_11 PF13531.6 BAJ51044.1 - 0.0012 18.6 0.0 0.0029 17.4 0.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.20 BAJ51044.1 - 0.0055 16.2 0.0 0.011 15.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 PBP_like_2 PF12849.7 BAJ51044.1 - 0.024 14.3 0.0 0.043 13.5 0.0 1.3 1 0 0 1 1 1 0 PBP superfamily domain Rhodanese PF00581.20 BAJ51045.1 - 1.6e-26 92.9 0.0 4.2e-12 46.5 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain Big_1 PF02369.16 BAJ51046.1 - 6.8e-06 26.0 0.0 0.015 15.2 0.0 2.6 2 1 0 2 2 2 2 Bacterial Ig-like domain (group 1) CarboxypepD_reg PF13620.6 BAJ51046.1 - 0.0076 16.5 0.0 0.6 10.4 0.0 2.5 2 0 0 2 2 2 1 Carboxypeptidase regulatory-like domain bMG3 PF11974.8 BAJ51046.1 - 0.066 13.2 0.0 1.5 8.9 0.0 2.3 2 0 0 2 2 2 0 Bacterial alpha-2-macroglobulin MG3 domain FdhE PF04216.12 BAJ51047.1 - 8.1e-11 42.3 0.0 9e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation DZR PF12773.7 BAJ51047.1 - 0.0017 18.4 12.7 0.0092 16.0 2.7 2.3 1 1 1 2 2 2 2 Double zinc ribbon zinc_ribbon_15 PF17032.5 BAJ51047.1 - 0.0099 16.6 4.5 0.04 14.7 2.5 2.5 2 1 0 2 2 2 1 zinc-ribbon family NMD3 PF04981.13 BAJ51047.1 - 0.037 13.5 0.9 0.15 11.5 1.3 1.6 1 1 1 2 2 2 0 NMD3 family zf-TFIIB PF13453.6 BAJ51047.1 - 0.2 11.0 5.1 0.58 9.5 0.8 2.8 2 1 0 2 2 2 0 Transcription factor zinc-finger TF_Zn_Ribbon PF08271.12 BAJ51047.1 - 0.25 10.9 8.6 2.2 7.9 0.8 3.4 3 0 0 3 3 3 0 TFIIB zinc-binding NRDD PF13597.6 BAJ51047.1 - 0.43 9.3 2.7 0.7 8.6 2.7 1.3 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase GATA PF00320.27 BAJ51047.1 - 0.48 10.1 3.6 7.5 6.3 1.2 2.8 2 1 0 2 2 2 0 GATA zinc finger HypA PF01155.19 BAJ51047.1 - 0.65 10.0 4.6 0.65 10.0 1.5 2.5 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ADD_ATRX PF17981.1 BAJ51047.1 - 1.3 9.0 7.2 0.32 10.9 0.3 2.8 2 1 1 3 3 3 0 Cysteine Rich ADD domain Rubredoxin_2 PF18073.1 BAJ51047.1 - 2.1 8.2 11.0 0.15 11.8 1.6 2.7 3 0 0 3 3 3 0 Rubredoxin metal binding domain DUF35_N PF12172.8 BAJ51047.1 - 3.6 7.5 14.1 0.47 10.4 0.3 3.8 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.10 BAJ51047.1 - 9 6.5 8.8 2e+02 2.2 6.1 3.4 2 1 0 2 2 2 0 Zinc ribbon domain RecR PF02132.15 BAJ51047.1 - 9.1 6.0 10.8 1.4 8.5 0.5 3.7 4 0 0 4 4 4 0 RecR protein Molybdopterin PF00384.22 BAJ51048.1 - 6.8e-46 157.1 3.4 1.3e-40 139.7 0.0 2.7 2 1 0 2 2 2 2 Molybdopterin oxidoreductase Molydop_binding PF01568.21 BAJ51048.1 - 7.1e-14 51.8 0.0 1.6e-13 50.6 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 BAJ51048.1 - 1.1e-12 47.7 0.5 2.6e-12 46.5 0.5 1.6 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain TAT_signal PF10518.9 BAJ51048.1 - 0.035 13.9 0.2 0.062 13.2 0.2 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Fer4_11 PF13247.6 BAJ51049.1 - 3.2e-20 72.1 12.1 1.4e-18 66.9 5.1 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 BAJ51049.1 - 1.1e-18 67.6 0.0 5.9e-07 30.0 0.0 3.9 3 2 1 4 4 4 4 4Fe-4S dicluster domain Fer4 PF00037.27 BAJ51049.1 - 3.9e-10 39.1 33.8 8.6e-06 25.4 2.9 5.7 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_10 PF13237.6 BAJ51049.1 - 1.8e-08 34.4 23.9 0.0032 17.6 6.7 4.2 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ51049.1 - 1e-07 32.0 24.9 0.02 15.1 5.6 4.1 2 1 0 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 BAJ51049.1 - 1.9e-07 30.9 38.8 0.00014 21.8 3.8 5.3 5 1 0 5 5 5 3 4Fe-4S binding domain Fer4_2 PF12797.7 BAJ51049.1 - 6.8e-06 25.9 11.2 0.0002 21.2 1.2 5.0 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_21 PF14697.6 BAJ51049.1 - 6.5e-05 23.0 26.3 0.00054 20.0 8.1 3.5 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 BAJ51049.1 - 0.00099 20.0 23.7 1.5 9.8 0.0 4.7 3 1 2 5 5 5 3 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 BAJ51049.1 - 0.0011 19.8 35.8 0.39 11.8 2.9 4.8 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_15 PF13459.6 BAJ51049.1 - 0.0017 19.0 11.3 0.062 14.0 0.3 3.7 3 0 0 3 3 3 2 4Fe-4S single cluster domain Fer4_4 PF12800.7 BAJ51049.1 - 0.0047 17.3 33.9 0.043 14.3 1.8 4.8 5 0 0 5 5 5 2 4Fe-4S binding domain Rv2175c_C PF18367.1 BAJ51049.1 - 0.029 14.5 0.0 11 6.2 0.0 2.5 2 0 0 2 2 2 0 Rv2175c C-terminal domain of unknown function Fer4_8 PF13183.6 BAJ51049.1 - 0.051 14.0 22.9 1.3 9.5 16.9 4.1 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 BAJ51049.1 - 0.095 13.3 21.2 0.66 10.6 0.1 4.4 4 1 1 5 5 5 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 BAJ51049.1 - 5 7.7 25.2 1.3 9.6 0.8 4.8 5 2 0 5 5 4 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 BAJ51049.1 - 5.9 7.8 18.5 2.2 9.2 0.4 3.5 2 1 1 3 3 3 0 4Fe-4S dicluster domain NrfD PF03916.14 BAJ51050.1 - 5.3e-17 62.4 30.8 1.3e-16 61.2 30.8 1.5 1 1 0 1 1 1 1 Polysulphide reductase, NrfD AF0941-like PF14591.6 BAJ51051.1 - 0.093 13.3 0.1 0.15 12.7 0.1 1.4 1 0 0 1 1 1 0 AF0941-like Rotamase PF00639.21 BAJ51052.1 - 0.057 14.4 0.3 4.5 8.3 0.0 2.1 1 1 1 2 2 2 0 PPIC-type PPIASE domain DUF2007 PF09413.10 BAJ51052.1 - 0.057 13.6 1.1 5.7 7.2 0.1 2.3 2 0 0 2 2 2 0 Putative prokaryotic signal transducing protein FTHFS PF01268.19 BAJ51052.1 - 0.1 10.8 0.3 0.11 10.6 0.3 1.0 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase Big_3 PF07523.12 BAJ51053.1 - 0.043 14.1 0.0 0.13 12.6 0.0 1.8 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 3) DNA_photolyase PF00875.18 BAJ51054.1 - 5.9e-13 49.1 0.1 1.2e-12 48.2 0.1 1.5 1 0 0 1 1 1 1 DNA photolyase Acetyltransf_1 PF00583.25 BAJ51055.1 - 1.6e-15 57.4 0.0 1.9e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 BAJ51055.1 - 2.2e-12 47.2 0.1 3.1e-12 46.7 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 BAJ51055.1 - 1.4e-11 44.4 0.0 1.9e-11 44.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 BAJ51055.1 - 3.4e-09 37.0 0.0 4.1e-09 36.8 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 BAJ51055.1 - 1.8e-06 28.0 0.0 3.5e-06 27.1 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 BAJ51055.1 - 4e-05 23.5 0.0 6.2e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 BAJ51055.1 - 0.002 18.8 0.0 0.0024 18.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 BAJ51055.1 - 0.018 14.5 0.3 0.074 12.5 0.3 1.9 1 1 0 1 1 1 0 Putative acetyl-transferase AstA PF04958.12 BAJ51055.1 - 0.098 11.2 0.0 0.24 9.9 0.0 1.6 1 1 1 2 2 2 0 Arginine N-succinyltransferase beta subunit Malic_M PF03949.15 BAJ51056.1 - 1.2e-27 96.9 0.5 1.5e-26 93.3 0.5 2.1 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain malic PF00390.19 BAJ51056.1 - 1.3e-26 93.5 0.0 4e-24 85.4 0.0 2.7 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Ribosomal_S11 PF00411.19 BAJ51056.1 - 0.22 11.9 1.2 0.56 10.6 0.1 2.2 3 0 0 3 3 3 0 Ribosomal protein S11 CCG PF02754.16 BAJ51057.1 - 2.9e-27 94.7 0.9 1.3e-15 57.4 0.0 2.8 3 0 0 3 3 2 2 Cysteine-rich domain Fer4_8 PF13183.6 BAJ51057.1 - 8e-12 45.4 2.3 8e-12 45.4 2.3 2.0 3 0 0 3 3 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ51057.1 - 6.4e-11 42.2 4.9 6.4e-11 42.2 4.9 2.1 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ51057.1 - 3.2e-10 40.0 4.9 3.2e-10 40.0 4.9 2.6 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 BAJ51057.1 - 1e-06 29.2 6.4 1e-06 29.2 6.4 2.3 3 1 0 3 3 1 1 4Fe-4S dicluster domain Nitrate_red_gam PF02665.14 BAJ51057.1 - 2.4e-05 24.0 2.7 2.4e-05 24.0 2.7 1.7 1 1 0 1 1 1 1 Nitrate reductase gamma subunit Fer4_16 PF13484.6 BAJ51057.1 - 4.3e-05 24.4 9.9 0.00024 21.9 10.1 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 BAJ51057.1 - 4.4e-05 23.9 6.6 4.4e-05 23.9 6.6 2.7 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.27 BAJ51057.1 - 6.2e-05 22.6 17.6 0.0058 16.4 5.0 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 BAJ51057.1 - 0.0003 21.1 14.9 0.00055 20.2 1.6 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 BAJ51057.1 - 0.00051 20.0 19.0 0.0071 16.4 3.3 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 BAJ51057.1 - 0.00076 19.5 5.7 0.00076 19.5 5.7 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 BAJ51057.1 - 0.0018 19.1 7.4 0.047 14.5 0.2 3.5 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 BAJ51057.1 - 0.0051 17.7 16.5 0.11 13.5 4.0 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain zf-Di19 PF05605.12 BAJ51057.1 - 0.11 12.8 0.6 8.7 6.7 0.0 2.6 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding E6 PF00518.17 BAJ51057.1 - 0.33 11.4 4.8 9 6.8 0.0 3.8 4 0 0 4 4 4 0 Early Protein (E6) Fer4_18 PF13746.6 BAJ51057.1 - 0.36 11.0 6.5 1.5 9.1 0.2 2.9 4 0 0 4 4 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 BAJ51057.1 - 0.49 10.6 15.2 0.39 10.9 0.9 3.1 4 0 0 4 4 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 BAJ51057.1 - 0.53 11.1 5.9 6.5 7.6 0.3 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF4131 PF13567.6 BAJ51057.1 - 1.7 8.3 12.1 0.12 12.0 0.7 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4131) ETF PF01012.21 BAJ51058.1 - 1.5e-45 155.4 1.3 2e-45 154.9 0.9 1.4 2 0 0 2 2 2 1 Electron transfer flavoprotein domain ETF_alpha PF00766.19 BAJ51059.1 - 6.5e-33 112.6 0.1 4e-32 110.1 0.0 2.3 3 0 0 3 3 3 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 BAJ51059.1 - 7.1e-18 65.1 2.2 1.3e-17 64.3 2.2 1.4 1 0 0 1 1 1 1 Electron transfer flavoprotein domain NTP_transf_3 PF12804.7 BAJ51060.1 - 4.1e-08 33.7 0.0 5.9e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CofC PF01983.16 BAJ51060.1 - 0.011 14.9 0.0 0.027 13.7 0.0 1.6 2 0 0 2 2 2 0 Guanylyl transferase CofC like PliI PF16743.5 BAJ51060.1 - 0.074 12.8 0.1 0.16 11.7 0.0 1.6 2 0 0 2 2 2 0 Periplasmic lysozyme inhibitor of I-type lysozyme AIRS_C PF02769.22 BAJ51061.1 - 1.3e-18 67.7 0.1 1.9e-18 67.1 0.1 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 BAJ51061.1 - 1.7e-14 54.2 0.1 3.8e-14 53.1 0.1 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Nitroreductase PF00881.24 BAJ51062.1 - 4.6e-25 88.6 0.3 4.4e-15 56.1 0.1 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 BAJ51062.1 - 1.4e-14 54.2 0.0 7.3e-06 25.7 0.0 2.8 1 1 1 2 2 2 2 Putative TM nitroreductase Oxidored_molyb PF00174.19 BAJ51063.1 - 4.9e-30 104.4 0.0 6.4e-30 104.0 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain tRNA-synt_1 PF00133.22 BAJ51064.1 - 1.6e-172 574.9 0.2 2.5e-172 574.3 0.2 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 BAJ51064.1 - 3.1e-34 118.1 1.0 6.9e-34 117.0 1.0 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 BAJ51064.1 - 1.3e-22 80.1 3.6 1.1e-09 37.5 0.1 3.9 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 BAJ51064.1 - 1.1e-08 34.7 0.0 0.0044 16.4 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 BAJ51064.1 - 0.0016 17.5 0.0 0.0053 15.7 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1_2 PF13603.6 BAJ51064.1 - 0.045 13.3 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 Lar_restr_allev PF14354.6 BAJ51064.1 - 0.23 11.8 0.8 12 6.3 0.1 3.1 3 0 0 3 3 3 0 Restriction alleviation protein Lar Desulfoferrod_N PF06397.12 BAJ51064.1 - 0.4 10.3 1.9 22 4.8 0.1 2.5 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-ACC PF17848.1 BAJ51064.1 - 3.6 7.8 7.7 55 4.0 0.1 3.9 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain DZR PF12773.7 BAJ51065.1 - 4.5e-08 33.0 5.9 3.3e-07 30.2 5.9 2.1 1 1 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 BAJ51065.1 - 6.5e-08 32.0 5.7 8.2e-05 22.2 1.0 2.4 2 0 0 2 2 2 2 zinc-ribbon domain zf-NADH-PPase PF09297.11 BAJ51065.1 - 0.0062 16.2 5.9 6.5 6.5 0.1 3.5 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-RanBP PF00641.18 BAJ51065.1 - 0.015 14.6 2.5 0.015 14.6 2.5 2.3 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Auto_anti-p27 PF06677.12 BAJ51065.1 - 0.019 15.1 10.8 0.031 14.4 1.9 3.2 2 1 1 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C3HC4_3 PF13920.6 BAJ51065.1 - 0.02 14.7 6.3 0.084 12.8 2.9 2.6 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zinc-ribbons_6 PF07191.12 BAJ51065.1 - 0.022 14.8 3.2 0.79 9.8 3.3 2.2 1 1 0 1 1 1 0 zinc-ribbons zf-ribbon_3 PF13248.6 BAJ51065.1 - 0.024 14.1 15.9 0.26 10.7 3.9 3.3 2 2 1 3 3 3 0 zinc-ribbon domain Ribosomal_L40e PF01020.17 BAJ51065.1 - 0.036 13.9 0.4 11 6.0 0.2 2.4 2 0 0 2 2 2 0 Ribosomal L40e family DUF4428 PF14471.6 BAJ51065.1 - 0.058 13.3 0.9 0.058 13.3 0.9 3.3 4 0 0 4 4 4 0 Domain of unknown function (DUF4428) TackOD1 PF18551.1 BAJ51065.1 - 0.069 12.8 0.8 0.088 12.5 0.8 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 DUF373 PF04123.13 BAJ51065.1 - 0.078 12.4 0.2 0.11 11.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) YhfH PF14149.6 BAJ51065.1 - 0.14 12.1 5.4 1.6 8.7 0.1 3.2 2 1 1 3 3 3 0 YhfH-like protein ABC_tran_CTD PF16326.5 BAJ51065.1 - 0.17 12.2 1.0 0.26 11.6 1.0 1.2 1 0 0 1 1 1 0 ABC transporter C-terminal domain TF_Zn_Ribbon PF08271.12 BAJ51065.1 - 0.28 10.7 12.4 4.6 6.8 1.2 3.3 2 1 1 3 3 3 0 TFIIB zinc-binding A2L_zn_ribbon PF08792.10 BAJ51065.1 - 0.33 10.7 0.0 0.33 10.7 0.0 3.3 4 0 0 4 4 4 0 A2L zinc ribbon domain HypA PF01155.19 BAJ51065.1 - 0.35 10.9 5.9 5.8 7.0 6.1 2.2 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_15 PF17032.5 BAJ51065.1 - 0.36 11.6 3.7 0.5 11.2 0.1 2.3 2 1 1 3 3 3 0 zinc-ribbon family Nudix_N_2 PF14803.6 BAJ51065.1 - 0.41 10.6 10.3 5 7.1 0.6 3.4 3 0 0 3 3 3 0 Nudix N-terminal zf-RRN7 PF11781.8 BAJ51065.1 - 0.46 10.2 12.0 3.4 7.4 0.5 3.8 3 1 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Gin PF10764.9 BAJ51065.1 - 0.52 10.3 7.0 6.4 6.8 2.0 3.1 2 1 1 3 3 3 0 Inhibitor of sigma-G Gin LIM PF00412.22 BAJ51065.1 - 0.53 10.5 3.5 1.2 9.4 0.1 2.6 2 1 1 3 3 3 0 LIM domain Rad50_zn_hook PF04423.14 BAJ51065.1 - 0.73 9.7 3.2 0.46 10.4 0.3 2.0 2 0 0 2 2 2 0 Rad50 zinc hook motif OrfB_Zn_ribbon PF07282.11 BAJ51065.1 - 0.97 9.4 8.0 0.21 11.5 0.6 2.8 1 1 2 3 3 3 0 Putative transposase DNA-binding domain zf-C2HC5 PF06221.13 BAJ51065.1 - 1.3 9.0 10.3 4.6 7.3 6.1 2.7 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type zf-RING_2 PF13639.6 BAJ51065.1 - 1.5 9.2 6.3 3.5 8.0 2.0 2.3 2 0 0 2 2 2 0 Ring finger domain Zn-ribbon_8 PF09723.10 BAJ51065.1 - 2 8.6 12.4 18 5.5 9.0 2.9 1 1 1 2 2 2 0 Zinc ribbon domain zf-Mss51 PF13824.6 BAJ51065.1 - 3.1 8.0 4.7 18 5.5 2.4 2.3 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF1610 PF07754.11 BAJ51065.1 - 3.8 7.6 9.5 1.3 9.0 2.5 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF1610) DUF1451 PF07295.11 BAJ51065.1 - 5.6 7.0 5.9 21 5.1 5.9 2.1 1 1 0 1 1 1 0 Zinc-ribbon containing domain zf-tcix PF14952.6 BAJ51065.1 - 8.7 6.1 11.0 11 5.7 3.8 3.0 2 1 1 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding PhnA_Zn_Ribbon PF08274.12 BAJ51065.1 - 9.2 6.3 7.4 5.9 6.9 0.5 3.0 3 0 0 3 3 3 0 PhnA Zinc-Ribbon LSM PF01423.22 BAJ51066.1 - 1.9e-20 72.3 0.1 2.1e-20 72.2 0.1 1.0 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 BAJ51066.1 - 0.037 13.7 0.0 0.054 13.2 0.0 1.3 1 0 0 1 1 1 0 Hfq protein SM-ATX PF14438.6 BAJ51066.1 - 0.056 13.6 0.0 0.074 13.2 0.0 1.2 1 0 0 1 1 1 0 Ataxin 2 SM domain LSM14 PF12701.7 BAJ51066.1 - 0.12 12.5 0.0 0.16 12.1 0.0 1.3 1 1 0 1 1 1 0 Scd6-like Sm domain AdoMet_Synthase PF01941.19 BAJ51067.1 - 1.8e-157 524.2 1.5 2.1e-157 524.0 1.5 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) GhoS PF11080.8 BAJ51067.1 - 0.1 12.6 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Endoribonuclease GhoS NucS PF01939.16 BAJ51068.1 - 4.5e-55 186.5 0.1 5.5e-55 186.2 0.1 1.0 1 0 0 1 1 1 1 Endonuclease NucS Cdc13_OB4_dimer PF18233.1 BAJ51068.1 - 0.067 13.3 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Cdc13 OB4 dimerization domain PMT_2 PF13231.6 BAJ51069.1 - 3.6e-11 43.5 14.9 3.6e-11 43.5 14.9 2.7 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.18 BAJ51069.1 - 4.9e-11 42.7 17.8 1.1e-08 35.0 17.2 4.0 3 2 1 4 4 4 2 Dolichyl-phosphate-mannose-protein mannosyltransferase Pox_LP_H2 PF03356.15 BAJ51069.1 - 0.2 11.5 0.5 0.47 10.3 0.3 1.7 1 1 0 1 1 1 0 Viral late protein H2 Radical_SAM_C PF16199.5 BAJ51070.1 - 3e-24 84.8 0.1 6.7e-24 83.7 0.1 1.6 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 BAJ51070.1 - 5.1e-23 82.3 0.0 1.3e-22 81.0 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 BAJ51070.1 - 5.7e-07 29.8 0.2 1.2e-06 28.7 0.2 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 BAJ51070.1 - 4.6e-06 26.6 0.1 1.1e-05 25.4 0.1 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 BAJ51070.1 - 0.0054 17.1 0.3 0.014 15.8 0.3 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Bac_luciferase PF00296.20 BAJ51071.1 - 1.2e-34 120.2 1.1 5.6e-34 118.0 1.1 1.8 1 1 0 1 1 1 1 Luciferase-like monooxygenase Abhydrolase_1 PF00561.20 BAJ51072.1 - 6.8e-28 98.0 0.1 3e-25 89.3 0.1 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 BAJ51072.1 - 9.8e-24 85.2 0.0 1.1e-23 85.0 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 BAJ51072.1 - 6.3e-16 58.4 0.0 1.3e-15 57.3 0.0 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ser_hydrolase PF06821.13 BAJ51072.1 - 6.6e-07 29.3 0.0 0.023 14.6 0.0 2.2 2 0 0 2 2 2 2 Serine hydrolase DLH PF01738.18 BAJ51072.1 - 4.1e-06 26.5 0.0 0.013 15.0 0.0 2.3 2 0 0 2 2 2 2 Dienelactone hydrolase family Ndr PF03096.14 BAJ51072.1 - 0.00013 20.8 0.0 0.00015 20.6 0.0 1.2 1 0 0 1 1 1 1 Ndr family FSH1 PF03959.13 BAJ51072.1 - 0.00025 20.8 0.0 0.005 16.5 0.0 2.5 2 1 0 2 2 2 1 Serine hydrolase (FSH1) UPF0227 PF05728.12 BAJ51072.1 - 0.0013 18.7 0.0 0.0028 17.6 0.0 1.5 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0227) PGAP1 PF07819.13 BAJ51072.1 - 0.0016 18.2 0.3 0.13 12.0 0.1 2.2 2 0 0 2 2 2 1 PGAP1-like protein Esterase PF00756.20 BAJ51072.1 - 0.0021 17.8 0.1 0.0052 16.4 0.1 1.6 2 0 0 2 2 2 1 Putative esterase Abhydrolase_3 PF07859.13 BAJ51072.1 - 0.0039 17.1 0.0 0.0064 16.4 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold BAAT_C PF08840.11 BAJ51072.1 - 0.0043 17.0 0.0 0.014 15.3 0.0 1.7 2 0 0 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 BAJ51072.1 - 0.0065 16.0 0.0 0.49 9.8 0.0 2.2 2 0 0 2 2 2 1 Prolyl oligopeptidase family Thioesterase PF00975.20 BAJ51072.1 - 0.0079 16.3 0.0 0.015 15.4 0.0 1.5 2 0 0 2 2 1 1 Thioesterase domain Abhydrolase_4 PF08386.10 BAJ51072.1 - 0.0088 16.1 0.0 0.014 15.5 0.0 1.3 1 0 0 1 1 1 1 TAP-like protein Abhydrolase_5 PF12695.7 BAJ51072.1 - 0.0097 15.7 0.0 0.031 14.0 0.0 1.7 2 0 0 2 2 2 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 BAJ51072.1 - 0.011 15.3 0.0 0.019 14.5 0.0 1.4 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Chlorophyllase2 PF12740.7 BAJ51072.1 - 0.013 14.4 0.2 0.082 11.8 0.1 2.1 2 1 0 2 2 2 0 Chlorophyllase enzyme DUF915 PF06028.11 BAJ51072.1 - 0.016 14.6 0.0 0.11 11.8 0.0 2.0 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) Lipase_3 PF01764.25 BAJ51072.1 - 0.13 12.2 0.1 0.22 11.4 0.1 1.3 1 0 0 1 1 1 0 Lipase (class 3) DUF1057 PF06342.12 BAJ51072.1 - 0.16 11.0 0.0 0.69 8.9 0.0 1.7 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1057) DUF2048 PF09752.9 BAJ51072.1 - 0.2 10.7 0.0 0.28 10.2 0.0 1.3 1 0 0 1 1 1 0 Abhydrolase domain containing 18 Hexapep PF00132.24 BAJ51073.1 - 8.8e-23 79.1 23.6 1.4e-07 31.0 4.3 5.7 3 1 1 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 BAJ51073.1 - 5.4e-12 45.2 23.3 1.9e-06 27.5 4.9 5.8 4 1 1 5 5 5 4 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 BAJ51073.1 - 0.85 7.7 2.7 1.2 7.2 0.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4954) SUI1 PF01253.22 BAJ51074.1 - 3.8e-18 65.8 0.3 4.7e-18 65.5 0.3 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.15 BAJ51074.1 - 0.019 14.7 1.3 0.026 14.2 1.3 1.2 1 0 0 1 1 1 0 DTW domain Img2 PF05046.14 BAJ51074.1 - 0.048 14.0 0.2 0.073 13.4 0.2 1.3 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) TFIIB PF00382.19 BAJ51075.1 - 2.8e-29 100.9 5.2 7.7e-14 51.5 0.2 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 BAJ51075.1 - 1.5e-13 50.0 1.9 2.7e-13 49.2 1.9 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.23 BAJ51075.1 - 1.5e-06 28.0 1.7 0.001 18.8 0.3 2.1 2 0 0 2 2 2 2 Cyclin, N-terminal domain HTH_11 PF08279.12 BAJ51075.1 - 5.6e-06 26.2 0.1 0.0045 16.9 0.0 2.6 2 0 0 2 2 2 1 HTH domain HTH_AsnC-type PF13404.6 BAJ51075.1 - 6.8e-06 25.8 0.0 0.11 12.3 0.0 2.7 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain HTH_23 PF13384.6 BAJ51075.1 - 0.00032 20.4 1.9 0.049 13.4 0.0 3.1 3 0 0 3 3 2 1 Homeodomain-like domain HTH_3 PF01381.22 BAJ51075.1 - 0.00034 20.6 0.1 0.0079 16.2 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix RNA_POL_M_15KD PF02150.16 BAJ51075.1 - 0.00043 20.1 0.4 0.00094 19.0 0.4 1.5 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit HTH_36 PF13730.6 BAJ51075.1 - 0.00058 19.8 0.1 0.35 10.9 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 BAJ51075.1 - 0.0023 17.5 0.0 2.2 7.9 0.0 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_Tnp_ISL3 PF13542.6 BAJ51075.1 - 0.0036 16.7 0.1 0.055 12.9 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 Sigma70_r4_2 PF08281.12 BAJ51075.1 - 0.0051 16.4 0.1 0.052 13.2 0.0 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_Crp_2 PF13545.6 BAJ51075.1 - 0.0067 16.4 0.0 0.054 13.5 0.0 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain TetR_N PF00440.23 BAJ51075.1 - 0.009 15.8 0.2 0.071 12.9 0.0 2.5 2 1 0 2 2 2 1 Bacterial regulatory proteins, tetR family Ribosomal_S27e PF01667.17 BAJ51075.1 - 0.0093 15.7 1.3 0.022 14.5 1.3 1.6 1 0 0 1 1 1 1 Ribosomal protein S27 HTH_28 PF13518.6 BAJ51075.1 - 0.0095 16.0 0.9 0.83 9.8 0.0 3.4 3 1 1 4 4 4 1 Helix-turn-helix domain LacI PF00356.21 BAJ51075.1 - 0.01 15.6 0.3 0.15 11.9 0.1 2.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_Mga PF08280.11 BAJ51075.1 - 0.012 15.6 0.0 11 6.2 0.0 2.7 3 0 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain Sigma70_r4 PF04545.16 BAJ51075.1 - 0.017 14.6 0.3 0.069 12.7 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 GntR PF00392.21 BAJ51075.1 - 0.018 14.7 0.0 1.5 8.5 0.0 2.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 BAJ51075.1 - 0.031 14.6 1.0 0.71 10.3 0.0 2.8 3 0 0 3 3 3 0 Transcriptional regulator Phage_terminase PF10668.9 BAJ51075.1 - 0.046 13.7 0.0 0.19 11.7 0.0 2.0 2 0 0 2 2 1 0 Phage terminase small subunit zf_UBZ PF18439.1 BAJ51075.1 - 0.051 13.2 0.5 2.6 7.7 0.0 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Cyclin_C PF02984.19 BAJ51075.1 - 0.054 13.6 0.3 1.5 8.9 0.0 2.6 1 1 1 2 2 2 0 Cyclin, C-terminal domain Zn_Tnp_IS1595 PF12760.7 BAJ51075.1 - 0.061 13.3 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 BAJ51075.1 - 0.083 12.8 0.3 0.23 11.4 0.3 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DZR PF12773.7 BAJ51075.1 - 0.087 12.9 0.3 0.18 11.8 0.3 1.5 1 0 0 1 1 1 0 Double zinc ribbon RPA_interact_C PF14768.6 BAJ51075.1 - 0.1 13.1 0.2 0.26 11.9 0.0 1.8 2 0 0 2 2 1 0 Replication protein A interacting C-terminal HypA PF01155.19 BAJ51075.1 - 0.12 12.4 3.0 5 7.2 0.3 2.9 3 1 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 BAJ51075.1 - 0.15 11.5 2.1 4.2 6.9 2.0 2.3 1 1 1 2 2 2 0 zinc-ribbon domain zf-C4_Topoisom PF01396.19 BAJ51075.1 - 0.17 11.7 0.4 0.42 10.4 0.4 1.7 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger YhfH PF14149.6 BAJ51075.1 - 0.19 11.7 1.3 18 5.4 0.1 2.4 2 0 0 2 2 2 0 YhfH-like protein IBR PF01485.21 BAJ51075.1 - 0.21 11.8 0.3 0.43 10.8 0.3 1.5 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain zinc_ribbon_2 PF13240.6 BAJ51075.1 - 0.25 11.1 2.4 1.8 8.4 2.2 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zinc-ribbons_6 PF07191.12 BAJ51075.1 - 0.29 11.1 1.7 0.31 11.0 0.3 1.7 2 0 0 2 2 1 0 zinc-ribbons tRNA-synt_1e PF01406.19 BAJ51076.1 - 3.4e-112 374.7 0.0 5.4e-112 374.0 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DALR_2 PF09190.11 BAJ51076.1 - 1.2e-16 61.0 0.1 3.2e-16 59.6 0.1 1.8 1 0 0 1 1 1 1 DALR domain tRNA-synt_1g PF09334.11 BAJ51076.1 - 7.7e-09 34.8 0.1 0.00055 18.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 BAJ51076.1 - 1.8e-08 33.2 0.0 1.1e-05 23.9 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 BAJ51076.1 - 2.7e-06 26.6 0.2 1.1e-05 24.5 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1d PF00750.19 BAJ51076.1 - 0.00055 19.0 0.1 0.0059 15.6 0.1 2.2 1 1 0 2 2 2 1 tRNA synthetases class I (R) EppA_BapA PF07268.11 BAJ51076.1 - 0.092 12.7 0.6 4.7 7.2 0.1 2.4 2 0 0 2 2 2 0 Exported protein precursor (EppA/BapA) NTP_transferase PF00483.23 BAJ51077.1 - 3.5e-38 131.6 0.0 4.4e-38 131.3 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 BAJ51077.1 - 3.6e-10 40.4 0.0 5.4e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 BAJ51077.1 - 0.01 15.6 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4224 PF13986.6 BAJ51077.1 - 0.089 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4224) Acetyltransf_1 PF00583.25 BAJ51078.1 - 7.7e-20 71.3 0.1 9.6e-20 71.0 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 BAJ51078.1 - 3.8e-15 56.1 0.2 5.6e-15 55.5 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 BAJ51078.1 - 4.4e-14 52.5 0.1 1.4e-13 50.9 0.1 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 BAJ51078.1 - 2.6e-09 36.9 0.1 6.6e-09 35.6 0.1 1.7 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 BAJ51078.1 - 1.4e-07 31.6 0.0 2.3e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 BAJ51078.1 - 9.9e-06 25.3 0.0 1.3e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 BAJ51078.1 - 3.7e-05 23.3 0.0 5.2e-05 22.8 0.0 1.3 1 1 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_4 PF13420.7 BAJ51078.1 - 0.0013 18.9 0.2 0.0022 18.2 0.2 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 BAJ51078.1 - 0.016 15.9 0.0 0.021 15.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 BAJ51078.1 - 0.11 12.7 0.0 0.23 11.6 0.0 1.7 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase Metallophos PF00149.28 BAJ51079.1 - 3.7e-08 34.1 2.8 1.5e-07 32.2 2.7 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 BAJ51079.1 - 1.2e-05 25.6 0.0 1.7e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain 4HBT PF03061.22 BAJ51080.1 - 3.6e-24 84.9 4.5 9.8e-12 45.1 0.2 2.3 2 0 0 2 2 2 2 Thioesterase superfamily EIIBC-GUT_C PF07663.11 BAJ51080.1 - 0.026 14.7 0.2 0.05 13.8 0.2 1.4 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II C-terminus MaoC_dehydratas PF01575.19 BAJ51080.1 - 0.028 14.0 0.1 1.9 8.1 0.0 2.3 2 0 0 2 2 2 0 MaoC like domain Bac_luciferase PF00296.20 BAJ51081.1 - 6.7e-57 193.3 0.4 8.1e-57 193.0 0.4 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase PEP-utilizers_C PF02896.18 BAJ51082.1 - 2e-95 319.3 0.1 3.1e-95 318.7 0.1 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 BAJ51082.1 - 1e-53 182.8 0.0 1.6e-36 126.2 0.0 3.2 1 1 1 2 2 2 2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 BAJ51082.1 - 5e-28 96.6 1.8 1.3e-27 95.4 1.8 1.7 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain DUF1801 PF08818.11 BAJ51082.1 - 0.15 12.6 0.0 2.5 8.7 0.0 2.8 3 0 0 3 3 3 0 Domain of unknown function (DU1801) Penicillinase_R PF03965.16 BAJ51083.1 - 0.00055 20.3 0.0 0.00077 19.8 0.0 1.2 1 0 0 1 1 1 1 Penicillinase repressor AbiEi_4 PF13338.6 BAJ51083.1 - 0.0031 17.6 0.2 0.0088 16.2 0.2 1.8 1 1 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin HTH_IclR PF09339.10 BAJ51083.1 - 0.013 15.3 0.0 0.03 14.1 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain PaaX PF07848.12 BAJ51083.1 - 0.015 15.5 0.2 0.041 14.1 0.2 1.7 1 0 0 1 1 1 0 PaaX-like protein SMC_Nse1 PF07574.13 BAJ51083.1 - 0.1 12.5 0.0 0.14 12.0 0.0 1.3 1 1 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex MarR PF01047.22 BAJ51083.1 - 0.11 12.5 0.0 0.32 10.9 0.0 1.7 2 0 0 2 2 2 0 MarR family PCNA_N PF00705.18 BAJ51084.1 - 4.4e-18 65.2 0.1 3.1e-17 62.5 0.0 2.0 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 BAJ51084.1 - 6.6e-09 36.0 0.3 7.7e-08 32.6 0.1 2.1 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain DNA_pol3_beta_3 PF02768.15 BAJ51084.1 - 0.009 15.9 0.2 0.086 12.7 0.0 2.1 2 0 0 2 2 2 1 DNA polymerase III beta subunit, C-terminal domain Peptidase_M50 PF02163.22 BAJ51085.1 - 5.8e-13 48.7 11.3 2.4e-08 33.6 0.5 2.9 1 1 1 2 2 2 2 Peptidase family M50 NETI PF14044.6 BAJ51085.1 - 0.21 11.4 0.0 0.55 10.0 0.0 1.8 2 0 0 2 2 2 0 NETI protein Nitroreductase PF00881.24 BAJ51087.1 - 7.2e-28 97.8 0.0 8.5e-28 97.5 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 BAJ51087.1 - 0.004 16.7 0.0 0.13 11.8 0.0 2.1 2 0 0 2 2 2 2 Putative TM nitroreductase UPF0052 PF01933.18 BAJ51088.1 - 7.9e-49 166.5 0.0 9.3e-49 166.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 CofC PF01983.16 BAJ51089.1 - 1.2e-19 70.4 0.0 1.6e-19 70.0 0.0 1.1 1 0 0 1 1 1 1 Guanylyl transferase CofC like EcsC PF12787.7 BAJ51089.1 - 0.0076 16.0 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 EcsC protein family NTP_transf_3 PF12804.7 BAJ51089.1 - 0.013 15.8 0.0 0.017 15.5 0.0 1.2 1 0 0 1 1 1 0 MobA-like NTP transferase domain OLF PF02191.16 BAJ51090.1 - 0.12 11.9 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Olfactomedin-like domain RMMBL PF07521.12 BAJ51091.1 - 1.2e-12 47.6 0.0 2.6e-12 46.5 0.0 1.6 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 BAJ51091.1 - 3.1e-12 46.4 0.1 7.1e-12 45.3 0.1 1.6 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Beta-Casp PF10996.8 BAJ51091.1 - 1.9e-11 44.3 0.0 3.7e-11 43.3 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B_6 PF16661.5 BAJ51091.1 - 3.4e-08 33.2 0.0 6.8e-08 32.2 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 BAJ51091.1 - 1.9e-07 31.3 0.5 8.1e-07 29.2 0.5 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 BAJ51091.1 - 0.00068 19.6 0.1 0.011 15.7 0.0 2.4 1 1 1 2 2 2 1 Beta-lactamase superfamily domain DS PF01916.17 BAJ51093.1 - 1.5e-81 273.8 0.0 1.7e-81 273.7 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase AA_kinase PF00696.28 BAJ51094.1 - 2.5e-46 158.2 0.1 3.4e-46 157.8 0.1 1.2 1 0 0 1 1 1 1 Amino acid kinase family ACT_7 PF13840.6 BAJ51094.1 - 2.2e-07 30.5 1.4 1.1e-06 28.3 0.2 2.5 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 BAJ51094.1 - 0.024 14.4 0.1 0.1 12.4 0.1 2.1 1 0 0 1 1 1 0 ACT domain YfdX PF10938.8 BAJ51094.1 - 0.14 12.1 0.0 0.61 10.0 0.0 2.1 2 1 0 2 2 2 0 YfdX protein Ald_Xan_dh_C2 PF02738.18 BAJ51095.1 - 5.2e-157 523.6 0.1 6.5e-157 523.3 0.1 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ51095.1 - 1.1e-27 96.6 0.0 2.8e-27 95.2 0.0 1.8 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Peripla_BP_6 PF13458.6 BAJ51095.1 - 0.02 14.6 0.2 0.15 11.7 0.0 2.1 2 0 0 2 2 2 0 Periplasmic binding protein UvdE PF03851.14 BAJ51095.1 - 0.033 13.4 0.0 0.058 12.6 0.0 1.3 1 0 0 1 1 1 0 UV-endonuclease UvdE FAD_binding_5 PF00941.21 BAJ51096.1 - 3.4e-46 157.1 0.1 4.9e-46 156.6 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 BAJ51096.1 - 4.5e-26 91.0 0.0 8.6e-26 90.1 0.0 1.5 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.20 BAJ51097.1 - 2.8e-25 88.1 0.1 2.8e-25 88.1 0.1 1.5 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 BAJ51097.1 - 1.2e-08 34.7 0.6 1.2e-08 34.7 0.6 2.2 1 1 1 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 BAJ51097.1 - 1.8e-05 24.7 0.5 3.1e-05 23.9 0.1 1.6 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 BAJ51097.1 - 0.0016 18.4 0.9 0.011 15.8 0.3 2.5 1 1 1 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain DUF5634_N PF18672.1 BAJ51097.1 - 0.038 13.7 0.1 0.12 12.1 0.0 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5634) HEAT_2 PF13646.6 BAJ51098.1 - 3.1e-25 88.4 0.1 1.8e-14 53.9 0.0 2.2 1 1 1 2 2 2 2 HEAT repeats HEAT_PBS PF03130.16 BAJ51098.1 - 1.4e-13 50.1 1.3 6.2e-05 23.3 0.0 3.7 4 0 0 4 4 4 3 PBS lyase HEAT-like repeat HEAT PF02985.22 BAJ51098.1 - 1.3e-12 46.8 0.0 0.02 15.1 0.0 3.7 4 0 0 4 4 4 3 HEAT repeat HEAT_EZ PF13513.6 BAJ51098.1 - 1.5e-07 31.7 0.0 1.4 9.6 0.0 3.8 3 1 1 4 4 4 3 HEAT-like repeat Cnd1 PF12717.7 BAJ51098.1 - 4.9e-07 29.9 0.0 0.014 15.4 0.0 3.1 1 1 2 3 3 3 2 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 BAJ51098.1 - 0.00067 18.3 0.0 0.0094 14.5 0.0 2.0 1 1 2 3 3 3 2 Adaptin N terminal region RICTOR_V PF14668.6 BAJ51098.1 - 0.026 14.8 0.0 1.3 9.4 0.0 2.4 1 1 1 2 2 2 0 Rapamycin-insensitive companion of mTOR, domain 5 ThiS PF02597.20 BAJ51099.1 - 6.7e-10 39.5 0.0 7.8e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.11 BAJ51099.1 - 5.3e-07 29.9 0.0 6.2e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 Urm1 (Ubiquitin related modifier) CGI-121 PF08617.10 BAJ51100.1 - 1.9e-12 47.6 0.1 2.3e-12 47.4 0.1 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 Spidroin_N PF16763.5 BAJ51100.1 - 0.0054 16.8 0.3 0.0054 16.8 0.3 1.6 2 0 0 2 2 2 1 Major ampullate spidroin 1, spider silk protein 1, N-term Sua5_yciO_yrdC PF01300.18 BAJ51101.1 - 4.3e-52 176.2 0.2 4.9e-52 176.0 0.2 1.0 1 0 0 1 1 1 1 Telomere recombination Zn_Tnp_IS1595 PF12760.7 BAJ51102.1 - 0.0089 16.0 0.3 0.0089 16.0 0.3 3.1 3 1 1 4 4 4 1 Transposase zinc-ribbon domain ADK_lid PF05191.14 BAJ51102.1 - 0.011 15.7 1.6 1.4 9.0 0.1 2.5 2 0 0 2 2 2 0 Adenylate kinase, active site lid HypA PF01155.19 BAJ51102.1 - 0.063 13.3 1.0 1.2 9.2 1.0 2.2 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Cys_rich_CPXG PF14255.6 BAJ51102.1 - 0.12 12.3 1.5 3 7.8 0.1 2.8 3 0 0 3 3 3 0 Cysteine-rich CPXCG zf-C2HE PF16278.5 BAJ51102.1 - 0.22 12.0 1.3 0.34 11.4 0.1 1.9 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Aminotran_4 PF01063.19 BAJ51103.1 - 4.8e-49 167.2 0.0 5.7e-49 167.0 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV Plasmo_rep PF12135.8 BAJ51103.1 - 0.075 12.6 0.7 0.96 9.1 0.6 2.4 2 0 0 2 2 2 0 Plasmodium repeat family Thioredoxin_3 PF13192.6 BAJ51104.1 - 1.2e-27 95.8 0.0 1.2e-20 73.3 0.1 2.1 2 0 0 2 2 2 2 Thioredoxin domain Glutaredoxin PF00462.24 BAJ51104.1 - 2.1e-12 47.0 0.4 8.8e-10 38.7 0.2 2.8 3 0 0 3 3 3 2 Glutaredoxin Thioredoxin_4 PF13462.6 BAJ51104.1 - 2.1e-07 31.2 0.3 0.0091 16.2 0.0 3.0 2 1 1 3 3 3 2 Thioredoxin Thioredoxin PF00085.20 BAJ51104.1 - 8.5e-07 28.9 0.0 0.047 13.7 0.1 2.1 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.6 BAJ51104.1 - 0.00028 21.3 1.1 0.4 11.1 0.2 3.6 2 2 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_9 PF14595.6 BAJ51104.1 - 0.00037 20.3 0.0 0.00073 19.3 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin DUF836 PF05768.14 BAJ51104.1 - 0.0012 19.2 0.0 0.15 12.5 0.0 2.2 2 0 0 2 2 2 1 Glutaredoxin-like domain (DUF836) ABC_transp_aux PF09822.9 BAJ51104.1 - 0.0032 17.0 0.0 2.2 7.7 0.0 2.1 2 0 0 2 2 2 2 ABC-type uncharacterized transport system TraF PF13728.6 BAJ51104.1 - 0.011 15.6 0.0 0.68 9.7 0.0 2.3 2 1 0 2 2 2 0 F plasmid transfer operon protein Aminotran_5 PF00266.19 BAJ51105.1 - 3.7e-24 85.4 0.0 4.8e-24 85.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V BON PF04972.17 BAJ51106.1 - 0.026 14.8 0.5 0.35 11.2 0.1 2.1 2 0 0 2 2 2 0 BON domain DUF1492 PF07374.11 BAJ51107.1 - 0.02 15.1 0.9 0.038 14.2 0.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1492) COG6 PF06419.11 BAJ51107.1 - 0.029 12.6 0.4 0.031 12.5 0.4 1.2 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 FlgN PF05130.12 BAJ51107.1 - 0.029 14.9 3.6 0.037 14.5 3.6 1.3 1 0 0 1 1 1 0 FlgN protein V-ATPase_G_2 PF16999.5 BAJ51107.1 - 0.13 12.7 13.9 0.15 12.5 13.9 1.0 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit Methyltransf_24 PF13578.6 BAJ51107.1 - 0.18 12.9 0.6 0.63 11.1 0.0 1.8 1 1 1 2 2 2 0 Methyltransferase domain DUF948 PF06103.11 BAJ51107.1 - 0.2 11.9 0.8 2 8.7 0.2 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) YtxH PF12732.7 BAJ51107.1 - 0.74 10.4 6.1 2.3 8.8 1.4 2.1 1 1 1 2 2 2 0 YtxH-like protein THOC7 PF05615.13 BAJ51107.1 - 1 9.6 8.7 2.6 8.3 8.7 1.7 1 1 0 1 1 1 0 Tho complex subunit 7 DUF2203 PF09969.9 BAJ51107.1 - 1.2 9.8 6.0 0.86 10.3 3.7 1.7 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF883 PF05957.13 BAJ51107.1 - 1.5 9.5 9.7 3.9 8.2 1.3 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) HisKA_3 PF07730.13 BAJ51107.1 - 1.9 9.0 6.5 30 5.2 1.8 3.0 1 1 1 2 2 2 0 Histidine kinase zf-C4H2 PF10146.9 BAJ51107.1 - 9.5 6.5 7.1 32 4.7 7.2 1.6 1 1 0 1 1 1 0 Zinc finger-containing protein vATP-synt_AC39 PF01992.16 BAJ51108.1 - 2.3e-56 191.7 1.2 2.9e-56 191.4 1.2 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit N_formyltrans_C PF18216.1 BAJ51108.1 - 0.019 14.7 0.1 0.059 13.1 0.0 1.8 2 0 0 2 2 2 0 N-formyltransferase dimerization C-terminal domain DHC_N1 PF08385.12 BAJ51108.1 - 0.039 12.6 0.0 0.076 11.6 0.0 1.4 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 1 2-oxogl_dehyd_N PF16078.5 BAJ51108.1 - 0.13 11.9 0.1 0.3 10.7 0.1 1.6 1 0 0 1 1 1 0 2-oxoglutarate dehydrogenase N-terminus TusA PF01206.17 BAJ51109.1 - 3.9e-16 58.6 0.0 6e-16 58.0 0.0 1.3 1 0 0 1 1 1 1 Sulfurtransferase TusA Sulf_transp PF04143.14 BAJ51110.1 - 1.5e-32 113.4 28.1 1.5e-18 67.4 12.9 2.3 2 0 0 2 2 2 2 Sulphur transport DUF1464 PF07318.12 BAJ51111.1 - 1.4e-99 333.4 0.1 1.6e-99 333.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1464) ROK PF00480.20 BAJ51111.1 - 0.11 11.9 0.6 0.46 9.9 0.0 2.0 2 0 0 2 2 2 0 ROK family GHMP_kinases_C PF08544.13 BAJ51112.1 - 9.4e-07 29.1 0.1 2.7e-06 27.6 0.1 1.8 1 1 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 BAJ51112.1 - 0.0042 17.3 0.0 0.013 15.7 0.0 1.9 1 0 0 1 1 1 1 GHMP kinases N terminal domain DUF447 PF04289.12 BAJ51113.1 - 1.7e-33 115.9 0.2 2.1e-33 115.6 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Putative_PNPOx PF01243.20 BAJ51113.1 - 0.021 15.0 0.0 0.046 13.9 0.0 1.5 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase HlyD_3 PF13437.6 BAJ51113.1 - 0.095 13.4 0.0 0.16 12.7 0.0 1.4 1 0 0 1 1 1 0 HlyD family secretion protein 2-oxoacid_dh PF00198.23 BAJ51114.1 - 3.1e-82 275.5 0.6 4e-82 275.1 0.6 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 BAJ51114.1 - 8.8e-20 70.3 3.4 8.8e-20 70.3 3.4 2.2 2 0 0 2 2 2 1 Biotin-requiring enzyme E3_binding PF02817.17 BAJ51114.1 - 2.4e-18 66.2 0.4 2.4e-18 66.2 0.4 2.5 3 0 0 3 3 3 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 BAJ51114.1 - 2.2e-08 33.8 4.9 8.6e-06 25.5 0.0 3.4 2 1 1 3 3 3 2 Biotin-lipoyl like HlyD_3 PF13437.6 BAJ51114.1 - 0.00035 21.2 1.3 0.04 14.6 0.0 2.9 2 1 1 3 3 3 1 HlyD family secretion protein HlyD_D23 PF16576.5 BAJ51114.1 - 0.0019 17.4 0.1 0.059 12.6 0.0 2.6 1 1 1 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion RnfC_N PF13375.6 BAJ51114.1 - 0.0085 16.0 1.1 0.058 13.3 0.0 2.4 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain PTS_EIIA_1 PF00358.20 BAJ51114.1 - 0.0096 15.7 0.5 3.6 7.4 0.1 2.6 1 1 1 2 2 2 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GCV_H PF01597.19 BAJ51114.1 - 0.046 13.6 0.4 0.24 11.3 0.2 2.2 1 1 1 2 2 2 0 Glycine cleavage H-protein MFS_1 PF07690.16 BAJ51115.1 - 1.2e-30 106.7 63.5 5.5e-21 74.9 36.6 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 BAJ51115.1 - 0.0036 16.1 3.5 0.0036 16.1 3.5 2.2 1 1 0 2 2 2 1 LacY proton/sugar symporter Thioredox_DsbH PF03190.15 BAJ51116.1 - 1.1e-75 253.0 0.0 2.2e-75 252.1 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 BAJ51116.1 - 4e-11 42.9 0.0 9.8e-11 41.7 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin-like Glyco_hydro_76 PF03663.14 BAJ51116.1 - 3.8e-07 29.9 0.4 2.9e-05 23.8 0.2 2.7 2 1 0 2 2 2 1 Glycosyl hydrolase family 76 Glyco_hydro_88 PF07470.13 BAJ51116.1 - 1.1e-05 24.7 0.0 0.0025 17.0 0.0 2.5 2 0 0 2 2 2 2 Glycosyl Hydrolase Family 88 Glyco_hydro_47 PF01532.20 BAJ51116.1 - 8.6e-05 21.6 0.0 0.026 13.4 0.0 3.0 2 1 0 3 3 3 1 Glycosyl hydrolase family 47 GlcNAc_2-epim PF07221.11 BAJ51116.1 - 0.00059 19.2 0.1 0.15 11.3 0.0 3.0 3 0 0 3 3 3 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) HTH_10 PF04967.12 BAJ51116.1 - 0.0007 19.4 0.1 0.0016 18.2 0.1 1.6 1 0 0 1 1 1 1 HTH DNA binding domain Thioredoxin_2 PF13098.6 BAJ51116.1 - 0.014 15.8 0.0 0.045 14.2 0.0 1.9 1 0 0 1 1 1 0 Thioredoxin-like domain C5-epim_C PF06662.13 BAJ51116.1 - 0.029 13.9 0.5 0.3 10.5 0.0 2.7 3 1 1 4 4 4 0 D-glucuronyl C5-epimerase C-terminus Glyco_hydro_127 PF07944.12 BAJ51116.1 - 0.035 12.6 1.0 0.48 8.8 0.2 2.4 2 1 0 2 2 2 0 Beta-L-arabinofuranosidase, GH127 Pec_lyase PF09492.10 BAJ51116.1 - 0.039 13.3 0.0 0.076 12.3 0.0 1.4 1 0 0 1 1 1 0 Pectic acid lyase LANC_like PF05147.13 BAJ51116.1 - 0.13 10.8 0.0 2.6 6.5 0.0 2.4 2 0 0 2 2 2 0 Lanthionine synthetase C-like protein tRNA-synt_1b PF00579.25 BAJ51117.1 - 1.4e-44 152.6 0.0 1.5e-29 103.2 0.0 2.0 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) Ribonuc_red_lgC PF02867.15 BAJ51118.1 - 5.9e-134 447.5 0.0 1.2e-111 373.8 0.0 2.3 2 1 0 2 2 2 2 Ribonucleotide reductase, barrel domain Ribonuc_red_2_N PF08471.10 BAJ51118.1 - 2.3e-40 136.7 0.0 6e-40 135.4 0.0 1.7 1 0 0 1 1 1 1 Class II vitamin B12-dependent ribonucleotide reductase UBA_6 PF18039.1 BAJ51118.1 - 0.0048 16.8 0.1 0.021 14.7 0.0 2.0 2 0 0 2 2 2 1 UBA-like domain RuvA_C PF07499.13 BAJ51118.1 - 0.044 14.2 0.1 0.85 10.1 0.0 3.0 3 0 0 3 3 3 0 RuvA, C-terminal domain MqsR_toxin PF15723.5 BAJ51118.1 - 0.11 12.8 0.0 0.27 11.6 0.0 1.7 1 0 0 1 1 1 0 Motility quorum-sensing regulator, toxin of MqsA OrfB_Zn_ribbon PF07282.11 BAJ51118.1 - 0.18 11.8 1.7 0.54 10.2 1.7 1.8 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Proton_antipo_M PF00361.20 BAJ51119.1 - 3.5e-74 249.6 28.2 3.5e-74 249.6 28.2 1.7 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 BAJ51119.1 - 5e-05 23.3 0.3 0.0003 20.8 0.3 2.4 1 0 0 1 1 1 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TP6A_N PF04406.14 BAJ51120.1 - 7.8e-13 48.2 0.0 1.5e-12 47.3 0.0 1.5 1 0 0 1 1 1 1 Type IIB DNA topoisomerase DUF2399 PF09664.10 BAJ51120.1 - 0.0001 22.3 0.0 0.00019 21.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function C-terminus (DUF2399) Toprim PF01751.22 BAJ51120.1 - 0.14 12.4 0.0 0.37 11.0 0.0 1.9 2 0 0 2 2 2 0 Toprim domain Metallophos_2 PF12850.7 BAJ51121.1 - 1.1e-07 32.3 0.2 1.5e-07 31.8 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 BAJ51121.1 - 9.5e-06 26.2 0.7 5.4e-05 23.8 0.0 2.0 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase SWIM PF04434.17 BAJ51122.1 - 5.2e-06 26.0 0.1 9.2e-06 25.2 0.1 1.3 1 0 0 1 1 1 1 SWIM zinc finger Cupin_2 PF07883.11 BAJ51123.1 - 1.8e-12 46.8 0.0 2.3e-12 46.4 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 BAJ51123.1 - 3.2e-07 30.1 0.0 3.9e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.19 BAJ51123.1 - 0.00022 21.2 0.0 0.00028 20.8 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 BAJ51123.1 - 0.0045 16.9 0.0 0.0054 16.6 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_3 PF05899.12 BAJ51123.1 - 0.013 15.2 0.1 0.022 14.4 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF861) EutQ PF06249.12 BAJ51123.1 - 0.043 13.6 0.0 0.067 12.9 0.0 1.4 1 1 0 1 1 1 0 Ethanolamine utilisation protein EutQ TetR_C_23 PF17931.1 BAJ51123.1 - 0.073 13.2 0.0 0.084 13.0 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Cupin_4 PF08007.12 BAJ51123.1 - 0.089 12.2 0.0 0.099 12.1 0.0 1.2 1 0 0 1 1 1 0 Cupin superfamily protein ARD PF03079.14 BAJ51123.1 - 0.09 13.0 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 ARD/ARD' family Pirin PF02678.16 BAJ51123.1 - 0.097 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Pirin dTDP_sugar_isom PF00908.17 BAJ51123.1 - 0.11 12.2 0.1 0.17 11.5 0.1 1.5 1 1 0 1 1 1 0 dTDP-4-dehydrorhamnose 3,5-epimerase Cupin_7 PF12973.7 BAJ51123.1 - 0.13 12.2 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 ChrR Cupin-like domain HAD_2 PF13419.6 BAJ51124.1 - 5e-07 30.0 0.0 0.011 15.8 0.0 2.9 2 2 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 BAJ51124.1 - 1.5e-06 28.6 0.0 5.8e-06 26.8 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 BAJ51124.1 - 0.041 14.0 0.0 0.18 11.9 0.0 2.1 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase GHMP_kinases_N PF00288.26 BAJ51125.1 - 1.1e-08 35.2 0.9 1.1e-08 35.2 0.9 2.2 2 0 0 2 2 2 1 GHMP kinases N terminal domain Iso_dh PF00180.20 BAJ51126.1 - 5.1e-87 292.3 0.0 5.8e-87 292.1 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Radical_SAM PF04055.21 BAJ51127.1 - 4.1e-10 40.3 0.0 1.3e-08 35.4 0.1 2.4 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 BAJ51127.1 - 3.3e-07 30.7 0.0 6.4e-07 29.7 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 BAJ51127.1 - 1.7e-05 24.9 0.0 6e-05 23.2 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain IL28A PF15177.6 BAJ51128.1 - 0.3 10.9 1.7 2.1 8.2 0.2 2.4 1 1 1 2 2 2 0 Interleukin-28A Hemerythrin PF01814.23 BAJ51129.1 - 1.6e-19 70.8 0.1 1.6e-19 70.8 0.1 1.6 2 0 0 2 2 2 1 Hemerythrin HHE cation binding domain SBP_bac_5 PF00496.22 BAJ51131.1 - 1.7e-28 99.7 2.6 4.5e-24 85.1 0.1 2.5 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle SF-assemblin PF06705.11 BAJ51131.1 - 0.0057 16.0 0.2 0.058 12.7 0.1 2.1 2 0 0 2 2 2 1 SF-assemblin/beta giardin Baculo_PEP_C PF04513.12 BAJ51131.1 - 0.074 13.1 2.9 0.14 12.2 2.9 1.3 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus BPD_transp_1 PF00528.22 BAJ51132.1 - 3.5e-25 88.8 13.6 3.5e-25 88.8 13.6 2.2 2 1 1 3 3 3 2 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 BAJ51133.1 - 2.1e-18 66.7 12.3 2.1e-18 66.7 12.3 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 BAJ51133.1 - 0.014 15.4 1.0 0.21 11.6 0.1 2.9 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CoatB PF10389.9 BAJ51133.1 - 0.23 11.3 2.3 0.74 9.7 2.3 1.8 1 0 0 1 1 1 0 Bacteriophage coat protein B ABC_tran PF00005.27 BAJ51134.1 - 3.5e-26 92.3 0.0 4.7e-26 91.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 BAJ51134.1 - 5.4e-17 62.1 0.5 8.9e-17 61.4 0.5 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 BAJ51134.1 - 2.3e-10 40.8 0.0 2.9e-08 33.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ51134.1 - 5.9e-07 29.1 0.2 1.8e-06 27.5 0.2 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TniB PF05621.11 BAJ51134.1 - 0.0011 18.4 0.1 0.012 15.0 0.1 2.1 2 0 0 2 2 2 1 Bacterial TniB protein AAA_22 PF13401.6 BAJ51134.1 - 0.0022 18.3 0.2 0.032 14.5 0.2 2.1 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 BAJ51134.1 - 0.0028 17.4 0.1 0.27 10.9 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_29 PF13555.6 BAJ51134.1 - 0.0042 16.8 0.0 0.0081 15.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 BAJ51134.1 - 0.01 16.2 0.0 0.054 13.9 0.0 2.1 3 0 0 3 3 3 0 AAA ATPase domain ABC_ATPase PF09818.9 BAJ51134.1 - 0.023 13.5 0.0 0.045 12.5 0.0 1.4 1 0 0 1 1 1 0 Predicted ATPase of the ABC class AAA_5 PF07728.14 BAJ51134.1 - 0.035 14.1 0.0 0.09 12.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 BAJ51134.1 - 0.038 13.9 1.1 0.33 10.9 0.2 2.5 2 1 1 3 3 3 0 RsgA GTPase Hpr_kinase_C PF07475.12 BAJ51134.1 - 0.13 11.7 0.1 0.24 10.9 0.1 1.4 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain AAA_7 PF12775.7 BAJ51134.1 - 0.16 11.5 0.0 0.34 10.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA PF00004.29 BAJ51134.1 - 0.17 12.3 0.1 0.53 10.7 0.1 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AIG1 PF04548.16 BAJ51134.1 - 0.19 11.0 0.0 0.3 10.4 0.0 1.2 1 0 0 1 1 1 0 AIG1 family DUF87 PF01935.17 BAJ51134.1 - 0.21 11.7 0.1 0.37 10.8 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain ABC_tran PF00005.27 BAJ51135.1 - 1.5e-32 112.9 0.0 2e-32 112.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 BAJ51135.1 - 2.5e-19 69.6 0.1 3.9e-19 68.9 0.1 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_16 PF13191.6 BAJ51135.1 - 0.0012 19.2 0.0 0.0021 18.4 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 BAJ51135.1 - 0.0029 17.1 0.0 0.013 15.0 0.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAJ51135.1 - 0.0049 16.7 0.9 0.14 12.0 0.1 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 BAJ51135.1 - 0.012 15.9 1.1 0.04 14.2 1.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAJ51135.1 - 0.012 15.3 0.1 0.025 14.3 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 BAJ51135.1 - 0.017 15.0 0.1 0.032 14.1 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 BAJ51135.1 - 0.052 13.6 0.0 0.094 12.8 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase PduV-EutP PF10662.9 BAJ51135.1 - 0.055 13.2 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA PF00004.29 BAJ51135.1 - 0.069 13.6 0.3 0.11 13.0 0.3 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 BAJ51135.1 - 0.071 13.0 0.7 0.13 12.2 0.6 1.6 1 1 0 1 1 1 0 NACHT domain IstB_IS21 PF01695.17 BAJ51135.1 - 0.076 12.7 0.1 0.16 11.7 0.1 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 BAJ51135.1 - 0.084 12.2 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 BAJ51135.1 - 0.12 11.9 0.1 0.19 11.2 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 BAJ51135.1 - 0.13 12.3 0.3 0.3 11.1 0.3 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TsaE PF02367.17 BAJ51135.1 - 0.17 11.9 0.2 0.3 11.1 0.2 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_13 PF13166.6 BAJ51135.1 - 0.23 10.0 0.5 1 8.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain MFS_1 PF07690.16 BAJ51136.1 - 0.00072 18.6 0.6 0.00087 18.3 0.6 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily TnpW PF14202.6 BAJ51136.1 - 0.028 14.2 2.0 0.029 14.2 0.1 2.1 2 0 0 2 2 2 0 Transposon-encoded protein TnpW RseC_MucC PF04246.12 BAJ51136.1 - 0.2 11.6 1.6 0.3 11.0 1.6 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Proton_antipo_M PF00361.20 BAJ51137.1 - 2.3e-81 273.3 27.1 2.3e-81 273.3 27.1 1.8 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 BAJ51137.1 - 2.7e-11 43.4 0.4 1.3e-10 41.2 0.4 2.3 1 0 0 1 1 1 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus V4R PF02830.18 BAJ51138.1 - 9.9e-09 35.1 3.0 3.2e-07 30.2 2.4 2.5 2 0 0 2 2 2 2 V4R domain Proton_antipo_M PF00361.20 BAJ51139.1 - 2e-84 283.3 19.8 2e-84 283.3 19.8 2.6 2 1 1 3 3 3 2 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 BAJ51139.1 - 3.2e-19 68.8 0.4 2.4e-17 62.7 0.1 3.3 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_C PF01010.19 BAJ51139.1 - 5.9e-06 26.1 2.6 0.037 13.6 0.0 2.5 2 0 0 2 2 2 2 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NADH5_C PF06455.11 BAJ51139.1 - 0.002 17.7 0.0 0.002 17.7 0.0 3.1 3 0 0 3 3 3 1 NADH dehydrogenase subunit 5 C-terminus CutA1 PF03091.15 BAJ51140.1 - 7.7e-24 83.4 0.1 8.5e-24 83.3 0.1 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein L27 PF02828.16 BAJ51140.1 - 0.17 11.6 0.1 0.25 11.1 0.1 1.3 1 0 0 1 1 1 0 L27 domain DUF309 PF03745.14 BAJ51141.1 - 5e-21 74.1 0.1 8.1e-21 73.5 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF309) Pneumo_ncap PF03246.13 BAJ51141.1 - 0.0081 15.0 0.0 0.0081 15.0 0.0 1.1 1 0 0 1 1 1 1 Pneumovirus nucleocapsid protein NTP_transferase PF00483.23 BAJ51141.1 - 0.025 14.2 0.0 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase UPF0102 PF02021.17 BAJ51141.1 - 0.11 12.8 0.1 0.23 11.7 0.1 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0102 ECF-ribofla_trS PF07155.12 BAJ51142.1 - 1.5e-27 96.7 20.5 1.7e-20 73.7 14.5 2.1 1 1 1 2 2 2 2 ECF-type riboflavin transporter, S component ECF_trnsprt PF12822.7 BAJ51142.1 - 6.2e-06 26.4 17.2 6.2e-06 26.4 17.2 2.1 1 1 1 2 2 2 1 ECF transporter, substrate-specific component 5TM-5TMR_LYT PF07694.12 BAJ51142.1 - 0.00033 20.2 26.0 0.00073 19.1 10.6 2.6 1 1 1 2 2 2 2 5TMR of 5TMR-LYT ABC_tran PF00005.27 BAJ51143.1 - 6.1e-21 75.4 0.0 7.8e-21 75.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 BAJ51143.1 - 1.8e-07 30.8 0.5 0.0043 16.5 0.0 2.4 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 BAJ51143.1 - 0.00069 19.3 0.1 0.0014 18.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 BAJ51143.1 - 0.013 15.4 0.1 0.024 14.5 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_25 PF13481.6 BAJ51143.1 - 0.015 14.9 0.0 0.044 13.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 BAJ51143.1 - 0.043 14.0 0.0 0.061 13.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_PrkA PF08298.11 BAJ51143.1 - 0.066 12.1 0.0 0.11 11.4 0.0 1.3 1 0 0 1 1 1 0 PrkA AAA domain AAA_21 PF13304.6 BAJ51143.1 - 0.068 13.0 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAJ51143.1 - 0.083 13.4 0.1 0.19 12.2 0.1 1.6 2 0 0 2 2 2 0 AAA domain Glyco_trans_4_2 PF13477.6 BAJ51143.1 - 0.087 12.9 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase 4-like AAA_5 PF07728.14 BAJ51143.1 - 0.11 12.5 0.0 6.9 6.7 0.0 2.7 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 BAJ51143.1 - 0.12 12.1 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 BAJ51143.1 - 0.17 11.8 0.0 8.4 6.3 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase Lactamase_B_2 PF12706.7 BAJ51144.1 - 6.2e-11 42.2 3.5 1.7e-09 37.5 0.3 2.5 2 1 0 2 2 2 2 Beta-lactamase superfamily domain RMMBL PF07521.12 BAJ51144.1 - 2.4e-08 33.8 0.0 9.8e-08 31.8 0.0 2.1 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_3 PF13483.6 BAJ51144.1 - 0.0028 17.6 0.2 0.17 11.8 0.0 2.4 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 BAJ51144.1 - 0.0031 17.6 6.4 0.012 15.7 6.4 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily AIM24 PF01987.17 BAJ51145.1 - 2.4e-52 177.7 0.0 2.7e-52 177.5 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DALR_1 PF05746.15 BAJ51146.1 - 8.5e-25 87.2 0.2 2.6e-24 85.7 0.0 2.0 2 0 0 2 2 2 1 DALR anticodon binding domain tRNA-synt_1d PF00750.19 BAJ51146.1 - 1.9e-22 79.7 0.0 6.6e-20 71.3 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 BAJ51146.1 - 5.1e-15 55.8 0.0 1.9e-14 54.0 0.0 2.0 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 BAJ51146.1 - 0.0035 16.7 0.0 0.0069 15.8 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 BAJ51146.1 - 0.021 13.6 0.1 0.076 11.7 0.1 1.9 2 0 0 2 2 2 0 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 BAJ51146.1 - 0.051 11.8 0.0 0.14 10.4 0.0 1.7 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) DUF420 PF04238.12 BAJ51147.1 - 1.7e-33 115.7 5.0 1.7e-33 115.7 5.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF420) DUF2306 PF10067.9 BAJ51147.1 - 8.2e-07 29.3 6.3 6.1e-05 23.3 2.1 2.4 1 1 1 2 2 2 2 Predicted membrane protein (DUF2306) TGS PF02824.21 BAJ51148.1 - 1.7e-19 69.6 0.2 8e-19 67.4 0.5 2.0 2 0 0 2 2 2 1 TGS domain MMR_HSR1 PF01926.23 BAJ51148.1 - 1.7e-10 41.0 0.1 3.9e-10 39.8 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase MMR_HSR1_Xtn PF16897.5 BAJ51148.1 - 1.5e-07 31.4 0.0 3.7e-07 30.1 0.0 1.7 2 0 0 2 2 1 1 C-terminal region of MMR_HSR1 domain FeoB_N PF02421.18 BAJ51148.1 - 9.6e-06 25.2 0.0 5.1e-05 22.8 0.0 2.0 2 0 0 2 2 2 1 Ferrous iron transport protein B AAA_22 PF13401.6 BAJ51148.1 - 0.0011 19.3 1.4 0.37 11.1 0.0 3.0 3 1 0 3 3 3 2 AAA domain G-alpha PF00503.20 BAJ51148.1 - 0.046 12.9 0.0 0.051 12.7 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit ABC_tran PF00005.27 BAJ51148.1 - 0.064 13.8 1.6 1.4 9.4 0.1 2.5 1 1 1 2 2 2 0 ABC transporter DUF815 PF05673.13 BAJ51148.1 - 0.089 11.9 0.0 0.18 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DnaB_bind PF10410.9 BAJ51148.1 - 0.091 13.0 0.5 0.44 10.8 0.1 2.4 2 0 0 2 2 2 0 DnaB-helicase binding domain of primase TcdA_TcdB PF12919.7 BAJ51148.1 - 0.12 11.7 0.5 0.82 8.9 0.0 2.2 2 0 0 2 2 2 0 TcdA/TcdB catalytic glycosyltransferase domain GTP_EFTU PF00009.27 BAJ51148.1 - 0.15 11.6 0.5 6.5 6.2 0.0 2.9 2 2 1 3 3 3 0 Elongation factor Tu GTP binding domain Ubiquitin_4 PF18036.1 BAJ51148.1 - 0.16 12.0 0.4 0.99 9.5 0.2 2.3 2 0 0 2 2 2 0 Ubiquitin-like domain ATP-synt_F PF01990.17 BAJ51149.1 - 9.2e-14 51.5 0.0 9.3e-14 51.5 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit LUD_dom PF02589.15 BAJ51149.1 - 0.022 14.5 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 LUD domain vATP-synt_E PF01991.18 BAJ51150.1 - 1.7e-12 47.2 11.1 2e-12 46.9 11.1 1.1 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit RasGAP_C PF03836.15 BAJ51150.1 - 0.032 14.4 0.8 0.054 13.6 0.8 1.4 1 0 0 1 1 1 0 RasGAP C-terminus CTD_bind PF04818.13 BAJ51150.1 - 0.23 12.3 0.9 11 6.9 0.9 2.5 1 1 0 1 1 1 0 RNA polymerase II-binding domain. NUC173 PF08161.12 BAJ51150.1 - 0.24 11.1 2.5 1.9 8.1 0.3 2.2 1 1 1 2 2 2 0 NUC173 domain ClpB_D2-small PF10431.9 BAJ51150.1 - 0.3 11.2 4.1 6.6 6.9 0.2 3.5 3 1 0 3 3 3 0 C-terminal, D2-small domain, of ClpB protein SurE PF01975.17 BAJ51151.1 - 4.5e-52 176.7 0.0 5.4e-52 176.4 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE HTH_AsnC-type PF13404.6 BAJ51153.1 - 1.9e-16 59.6 0.4 3.3e-16 58.8 0.4 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 BAJ51153.1 - 5.8e-16 58.2 0.1 1.1e-15 57.3 0.1 1.5 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 BAJ51153.1 - 1.5e-15 56.5 0.1 3.6e-15 55.2 0.3 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 BAJ51153.1 - 7.8e-07 28.5 0.1 1.4e-06 27.8 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Tnp_ISL3 PF13542.6 BAJ51153.1 - 0.00044 19.6 0.0 0.00069 19.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 TrmB PF01978.19 BAJ51153.1 - 0.00096 19.0 1.8 0.045 13.6 0.0 2.8 2 1 1 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 BAJ51153.1 - 0.0019 18.0 0.0 0.004 17.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 BAJ51153.1 - 0.0041 17.0 0.0 0.0073 16.2 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 BAJ51153.1 - 0.0055 16.6 0.0 0.012 15.5 0.0 1.7 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 BAJ51153.1 - 0.0065 16.2 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 BAJ51153.1 - 0.009 16.1 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4777 PF16007.5 BAJ51153.1 - 0.012 15.8 3.0 0.02 15.1 0.0 2.5 4 0 0 4 4 2 0 Domain of unknown function (DUF4777) ACT_4 PF13291.6 BAJ51153.1 - 0.027 15.0 0.2 0.1 13.2 0.2 2.0 1 1 1 2 2 2 0 ACT domain Sigma70_r4_2 PF08281.12 BAJ51153.1 - 0.038 13.7 0.1 0.12 12.0 0.1 1.9 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.6 BAJ51153.1 - 0.041 13.7 0.0 0.084 12.7 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_50 PF18024.1 BAJ51153.1 - 0.051 13.2 0.2 0.19 11.4 0.2 2.0 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_DeoR PF08220.12 BAJ51153.1 - 0.051 13.3 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Chlor_dismutase PF06778.12 BAJ51153.1 - 0.082 12.5 0.0 0.18 11.3 0.0 1.5 2 0 0 2 2 2 0 Chlorite dismutase MarR PF01047.22 BAJ51153.1 - 0.1 12.6 0.1 0.36 10.8 0.0 1.9 2 0 0 2 2 2 0 MarR family FaeA PF04703.12 BAJ51153.1 - 0.1 13.0 0.0 3 8.3 0.0 2.3 2 0 0 2 2 2 0 FaeA-like protein HTH_Mga PF08280.11 BAJ51153.1 - 0.1 12.6 0.0 0.38 10.8 0.0 1.9 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_1 PF00126.27 BAJ51153.1 - 0.11 12.4 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF2805 PF10985.8 BAJ51153.1 - 0.19 12.2 0.5 0.61 10.5 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2805) Semialdhyde_dh PF01118.24 BAJ51154.1 - 1.3e-33 116.0 0.0 2.1e-33 115.3 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 BAJ51154.1 - 3.4e-12 46.8 0.0 6e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.22 BAJ51154.1 - 0.025 15.4 0.0 0.05 14.4 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold AA_kinase PF00696.28 BAJ51155.1 - 4.1e-36 124.8 6.3 4.6e-36 124.6 6.3 1.0 1 0 0 1 1 1 1 Amino acid kinase family Lar_restr_allev PF14354.6 BAJ51156.1 - 2.5e-06 27.8 0.2 2.9e-06 27.5 0.2 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 BAJ51156.1 - 0.0012 18.4 2.6 0.0021 17.6 2.6 1.5 1 1 0 1 1 1 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 BAJ51156.1 - 0.0037 17.2 0.2 0.0058 16.5 0.1 1.3 1 1 0 1 1 1 1 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 BAJ51156.1 - 0.0058 16.7 1.3 2.3 8.4 0.1 2.2 2 0 0 2 2 2 2 Zinc ribbon domain Cys_rich_CPXG PF14255.6 BAJ51156.1 - 0.0074 16.2 0.3 1.9 8.4 0.1 2.1 2 0 0 2 2 2 2 Cysteine-rich CPXCG DNA_ligase_ZBD PF03119.16 BAJ51156.1 - 0.011 15.7 2.1 0.067 13.2 0.6 2.2 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Zn_Tnp_IS1595 PF12760.7 BAJ51156.1 - 0.016 15.2 0.1 0.031 14.2 0.1 1.5 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Nudix_N_2 PF14803.6 BAJ51156.1 - 0.024 14.5 0.8 6.7 6.7 0.0 2.2 2 0 0 2 2 2 0 Nudix N-terminal Prim_Zn_Ribbon PF08273.12 BAJ51156.1 - 0.032 14.5 0.9 0.63 10.4 0.7 2.1 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase zf-HYPF PF07503.12 BAJ51156.1 - 0.052 13.3 0.5 4.6 7.1 0.1 2.2 2 0 0 2 2 2 0 HypF finger RNA_POL_M_15KD PF02150.16 BAJ51156.1 - 0.062 13.2 0.7 0.092 12.6 0.7 1.3 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit DUF5497 PF17601.2 BAJ51156.1 - 0.069 13.5 0.0 0.081 13.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5497) zf-RRN7 PF11781.8 BAJ51156.1 - 0.098 12.4 3.1 5.7 6.7 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-IS66 PF13005.7 BAJ51156.1 - 0.28 11.6 2.5 7.9 7.0 0.1 2.3 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 RimK PF08443.11 BAJ51157.1 - 1.8e-27 96.2 0.0 2.4e-27 95.8 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 BAJ51157.1 - 2.8e-07 30.1 0.0 4e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain CPSase_L_D2 PF02786.17 BAJ51157.1 - 6e-05 22.6 0.0 0.00026 20.6 0.0 1.9 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_ST PF14397.6 BAJ51157.1 - 0.00013 21.3 0.0 0.016 14.5 0.0 2.1 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATP-grasp PF02222.22 BAJ51157.1 - 0.00023 20.8 0.0 0.00051 19.6 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 BAJ51157.1 - 0.00098 19.2 0.1 0.013 15.6 0.1 2.5 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 BAJ51157.1 - 0.0011 18.5 0.0 0.0015 18.0 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Aminotran_3 PF00202.21 BAJ51158.1 - 2.6e-110 368.9 0.0 3.3e-110 368.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 BAJ51158.1 - 0.00052 19.3 0.0 0.00066 19.0 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 BAJ51158.1 - 0.0015 17.6 0.0 0.0026 16.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Asparaginase_C PF17763.1 BAJ51158.1 - 0.11 12.8 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain LIG3_BRCT PF16759.5 BAJ51158.1 - 0.11 12.8 0.0 0.49 10.7 0.0 2.0 2 0 0 2 2 2 0 DNA ligase 3 BRCT domain cobW PF02492.19 BAJ51159.1 - 2.1e-07 30.7 0.3 1.1e-06 28.4 0.3 2.0 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Thymidylate_kin PF02223.17 BAJ51159.1 - 0.0038 16.9 0.0 0.0081 15.9 0.0 1.5 1 0 0 1 1 1 1 Thymidylate kinase CbiA PF01656.23 BAJ51159.1 - 0.0039 17.2 0.2 0.0094 16.0 0.2 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 BAJ51159.1 - 0.012 15.0 2.3 0.088 12.2 0.9 2.2 2 0 0 2 2 2 0 NUBPL iron-transfer P-loop NTPase AAA_26 PF13500.6 BAJ51159.1 - 0.019 14.8 0.0 0.034 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_31 PF13614.6 BAJ51159.1 - 0.042 13.7 0.5 0.11 12.4 0.5 1.7 1 0 0 1 1 1 0 AAA domain CLP1_P PF16575.5 BAJ51159.1 - 0.077 12.8 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Lipase_GDSL_2 PF13472.6 BAJ51159.1 - 0.081 13.3 0.0 0.15 12.5 0.0 1.5 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family PRK PF00485.18 BAJ51159.1 - 0.089 12.5 0.0 0.25 11.0 0.0 1.7 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family LpxK PF02606.14 BAJ51159.1 - 0.09 11.9 1.1 0.44 9.6 0.3 2.2 2 1 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase RsgA_GTPase PF03193.16 BAJ51159.1 - 0.13 12.2 0.1 14 5.6 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase AAA_30 PF13604.6 BAJ51159.1 - 0.2 11.3 1.6 0.43 10.3 0.2 2.1 2 0 0 2 2 2 0 AAA domain MeaB PF03308.16 BAJ51159.1 - 0.33 9.9 5.9 0.17 10.9 0.5 2.3 2 1 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Peptidase_M20 PF01546.28 BAJ51160.1 - 1.1e-27 97.0 0.1 1.5e-27 96.7 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 BAJ51160.1 - 2.1e-12 46.9 0.0 3.9e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 BAJ51160.1 - 0.00061 19.5 0.1 0.00086 19.1 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M28 Lyase_1 PF00206.20 BAJ51161.1 - 1.4e-43 149.5 1.2 3.8e-43 148.1 0.3 2.0 2 0 0 2 2 2 1 Lyase ASL_C2 PF14698.6 BAJ51161.1 - 7.1e-06 26.7 0.1 2.7e-05 24.9 0.1 2.1 1 0 0 1 1 1 1 Argininosuccinate lyase C-terminal Ribosomal_S13 PF00416.22 BAJ51161.1 - 0.028 14.8 0.1 10 6.6 0.0 2.4 2 0 0 2 2 2 0 Ribosomal protein S13/S18 Arginosuc_synth PF00764.19 BAJ51162.1 - 3.3e-154 513.9 0.0 3.8e-154 513.7 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 BAJ51162.1 - 0.00062 19.3 0.1 0.0011 18.5 0.1 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 BAJ51162.1 - 0.028 13.9 0.2 19 4.7 0.0 3.0 3 0 0 3 3 3 0 Diphthamide synthase PAPS_reduct PF01507.19 BAJ51162.1 - 0.047 13.7 0.0 0.12 12.4 0.0 1.7 1 1 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family dsDNA_bind PF01984.20 BAJ51164.1 - 1.2e-24 86.7 10.7 1.7e-24 86.2 10.7 1.2 1 0 0 1 1 1 1 Double-stranded DNA-binding domain Ebp2 PF05890.12 BAJ51164.1 - 0.026 14.1 4.0 0.027 14.0 4.0 1.2 1 0 0 1 1 1 0 Eukaryotic rRNA processing protein EBP2 SASP PF00269.20 BAJ51164.1 - 0.032 14.2 0.4 0.07 13.2 0.0 1.7 2 0 0 2 2 2 0 Small, acid-soluble spore proteins, alpha/beta type Casc1_N PF15927.5 BAJ51164.1 - 8.3 6.0 14.3 25 4.5 13.7 1.8 1 1 1 2 2 2 0 Cancer susceptibility candidate 1 N-terminus PAC2 PF09754.9 BAJ51165.1 - 9.8e-31 107.4 0.1 1.2e-30 107.1 0.1 1.0 1 0 0 1 1 1 1 PAC2 family TadZ_N PF16968.5 BAJ51165.1 - 0.064 13.0 0.2 8.3 6.1 0.0 2.2 2 0 0 2 2 2 0 Pilus assembly protein TadZ N-terminal TGT PF01702.18 BAJ51166.1 - 3.4e-71 240.2 0.0 4.8e-71 239.7 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase DUF5591 PF17884.1 BAJ51166.1 - 0.0027 17.6 0.1 0.0052 16.7 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) NTP_transferase PF00483.23 BAJ51166.1 - 0.076 12.6 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Nucleotidyl transferase Creatininase PF02633.14 BAJ51166.1 - 0.19 11.2 0.0 0.45 10.0 0.0 1.6 1 0 0 1 1 1 0 Creatinine amidohydrolase Acylphosphatase PF00708.18 BAJ51167.1 - 1.3e-26 92.8 0.3 2.9e-26 91.7 0.3 1.7 1 0 0 1 1 1 1 Acylphosphatase PMC2NT PF08066.12 BAJ51167.1 - 0.35 11.6 14.8 0.087 13.5 4.3 3.5 1 1 1 2 2 2 0 PMC2NT (NUC016) domain Glutaredoxin2_C PF04399.13 BAJ51167.1 - 3.5 7.5 10.4 12 5.8 1.3 3.4 2 1 2 4 4 4 0 Glutaredoxin 2, C terminal domain DUF16 PF01519.16 BAJ51167.1 - 5.2 7.6 22.2 0.89 10.1 9.6 3.0 2 1 1 3 3 3 0 Protein of unknown function DUF16 DUF3552 PF12072.8 BAJ51167.1 - 6.3 6.2 28.5 4.9 6.5 9.4 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF3552) DUF4843 PF16132.5 BAJ51167.1 - 8.9 5.9 11.3 4.9 6.7 1.1 3.3 1 1 3 4 4 4 0 Domain of unknown function (DUF4843) Pilin_N PF07790.11 BAJ51169.1 - 1.9e-05 25.5 4.7 3.1e-05 24.8 3.6 1.8 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Urease_beta PF00699.20 BAJ51169.1 - 0.012 15.7 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 0 Urease beta subunit T2SSF PF00482.23 BAJ51170.1 - 0.0014 18.5 0.1 0.0014 18.5 0.1 3.8 3 1 0 3 3 3 2 Type II secretion system (T2SS), protein F Nic96 PF04097.14 BAJ51170.1 - 0.12 10.8 0.0 0.17 10.3 0.0 1.1 1 0 0 1 1 1 0 Nup93/Nic96 TackOD1 PF18551.1 BAJ51171.1 - 4.3e-20 72.2 4.0 5.4e-20 71.8 4.0 1.1 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 DZR PF12773.7 BAJ51171.1 - 1.1e-05 25.4 13.7 0.015 15.3 5.0 3.1 1 1 0 2 2 2 2 Double zinc ribbon HypA PF01155.19 BAJ51171.1 - 0.00018 21.5 10.0 0.21 11.6 0.2 3.2 1 1 2 3 3 3 2 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 BAJ51171.1 - 0.0011 18.8 0.4 0.0011 18.8 0.4 3.9 4 1 0 4 4 4 1 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.12 BAJ51171.1 - 0.0015 18.0 2.1 0.0015 18.0 2.1 3.8 3 1 1 4 4 4 1 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 BAJ51171.1 - 0.0021 18.0 7.2 0.012 15.6 0.2 3.5 3 1 0 3 3 3 1 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 BAJ51171.1 - 0.0034 17.5 16.3 1.7 8.8 3.9 4.4 3 2 1 4 4 4 2 Zinc ribbon domain Y1_Tnp PF01797.16 BAJ51171.1 - 0.0066 16.6 0.0 0.012 15.7 0.0 1.4 1 0 0 1 1 1 1 Transposase IS200 like Nudix_N_2 PF14803.6 BAJ51171.1 - 0.018 15.0 0.8 0.018 15.0 0.8 3.9 4 1 0 4 4 4 0 Nudix N-terminal zf_UBZ PF18439.1 BAJ51171.1 - 0.027 14.1 7.9 14 5.4 0.0 4.3 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger RNA_POL_M_15KD PF02150.16 BAJ51171.1 - 0.033 14.1 0.3 0.033 14.1 0.3 3.6 3 1 1 4 4 4 0 RNA polymerases M/15 Kd subunit DUF1451 PF07295.11 BAJ51171.1 - 0.075 13.1 1.0 0.075 13.1 1.0 3.3 1 1 1 3 3 3 0 Zinc-ribbon containing domain zf-TFIIB PF13453.6 BAJ51171.1 - 0.091 12.1 1.9 0.4 10.0 0.8 2.6 2 0 0 2 2 2 0 Transcription factor zinc-finger zinc-ribbons_6 PF07191.12 BAJ51171.1 - 0.12 12.4 10.9 0.22 11.5 2.8 2.4 1 1 2 3 3 3 0 zinc-ribbons zf-ribbon_3 PF13248.6 BAJ51171.1 - 0.21 11.0 20.6 5.1 6.6 0.8 5.5 4 2 2 6 6 6 0 zinc-ribbon domain zinc_ribbon_15 PF17032.5 BAJ51171.1 - 0.3 11.9 10.1 5.1 7.9 0.1 3.1 2 1 0 2 2 2 0 zinc-ribbon family DUF2318 PF10080.9 BAJ51171.1 - 0.31 11.2 11.8 0.04 14.0 3.3 2.4 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) DpnI PF06044.12 BAJ51171.1 - 0.53 9.9 3.9 0.22 11.1 0.7 1.9 1 1 1 2 2 2 0 Dam-replacing family zf-ACC PF17848.1 BAJ51171.1 - 0.55 10.4 13.1 0.086 12.9 2.0 4.3 3 2 1 4 4 4 0 Acetyl-coA carboxylase zinc finger domain DUF2054 PF10218.9 BAJ51171.1 - 0.66 10.1 10.7 0.026 14.6 2.6 2.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2054) zf-C3HC4_3 PF13920.6 BAJ51171.1 - 0.67 9.9 11.5 4.3 7.3 0.8 2.6 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) LIM PF00412.22 BAJ51171.1 - 0.79 10.0 10.1 0.21 11.8 0.7 3.3 3 1 0 3 3 3 0 LIM domain Ribosomal_L37e PF01907.19 BAJ51171.1 - 1 9.6 14.5 1.1 9.4 2.0 3.1 2 1 1 3 3 3 0 Ribosomal protein L37e zinc_ribbon_2 PF13240.6 BAJ51171.1 - 1 9.2 25.7 2.8 7.8 1.6 5.8 4 2 0 4 4 4 0 zinc-ribbon domain C1_1 PF00130.22 BAJ51171.1 - 1.3 9.0 12.8 1.5 8.8 1.2 2.8 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) C1_2 PF03107.16 BAJ51171.1 - 3.4 8.1 8.6 2.1 8.7 0.1 2.7 2 1 0 2 2 2 0 C1 domain IBR PF01485.21 BAJ51171.1 - 5.9 7.2 12.4 7.3e+02 0.5 12.4 2.7 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain zf-C2HC5 PF06221.13 BAJ51171.1 - 5.9 7.0 17.3 3.9 7.5 1.4 3.5 1 1 2 3 3 3 0 Putative zinc finger motif, C2HC5-type T2SSE PF00437.20 BAJ51172.1 - 5.9e-38 130.5 0.2 1.3e-37 129.4 0.0 1.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_18 PF13238.6 BAJ51172.1 - 0.00012 22.6 0.0 0.00063 20.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 BAJ51172.1 - 0.00039 20.7 0.0 0.0012 19.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 BAJ51172.1 - 0.00039 20.9 0.0 0.0018 18.8 0.0 2.0 2 0 0 2 2 1 1 ABC transporter AAA_29 PF13555.6 BAJ51172.1 - 0.0004 20.1 0.5 0.00083 19.1 0.1 1.7 2 0 0 2 2 1 1 P-loop containing region of AAA domain AAA_7 PF12775.7 BAJ51172.1 - 0.00047 19.7 0.1 0.00088 18.8 0.1 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_33 PF13671.6 BAJ51172.1 - 0.0012 19.0 0.1 0.0035 17.5 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_16 PF13191.6 BAJ51172.1 - 0.0021 18.5 0.0 0.004 17.5 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 BAJ51172.1 - 0.0021 18.6 1.0 0.0071 16.9 0.0 2.2 3 0 0 3 3 2 1 AAA domain AAA_21 PF13304.6 BAJ51172.1 - 0.0046 16.8 0.0 0.0093 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system cobW PF02492.19 BAJ51172.1 - 0.0082 15.7 0.2 0.024 14.2 0.2 1.8 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Zeta_toxin PF06414.12 BAJ51172.1 - 0.011 15.1 0.0 0.022 14.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 BAJ51172.1 - 0.018 14.8 0.0 0.045 13.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 BAJ51172.1 - 0.02 14.3 0.0 0.033 13.6 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ATP_bind_1 PF03029.17 BAJ51172.1 - 0.021 14.6 0.0 0.04 13.7 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_5 PF07728.14 BAJ51172.1 - 0.024 14.6 0.0 0.05 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 BAJ51172.1 - 0.025 14.6 0.2 0.15 12.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 BAJ51172.1 - 0.031 13.6 0.1 0.063 12.6 0.1 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family NACHT PF05729.12 BAJ51172.1 - 0.031 14.2 0.0 0.067 13.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ATPase_2 PF01637.18 BAJ51172.1 - 0.031 14.2 0.0 0.079 12.9 0.0 1.6 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_19 PF13245.6 BAJ51172.1 - 0.034 14.5 0.1 0.15 12.4 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 BAJ51172.1 - 0.034 13.9 0.0 0.063 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 BAJ51172.1 - 0.035 13.5 0.0 0.1 12.0 0.0 1.7 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain PhoH PF02562.16 BAJ51172.1 - 0.036 13.5 0.0 0.081 12.4 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_27 PF13514.6 BAJ51172.1 - 0.042 13.4 0.0 0.19 11.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain DEAD PF00270.29 BAJ51172.1 - 0.042 13.6 0.1 0.071 12.9 0.1 1.6 1 1 0 1 1 1 0 DEAD/DEAH box helicase AAA_25 PF13481.6 BAJ51172.1 - 0.046 13.3 0.1 0.13 11.8 0.1 1.8 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 BAJ51172.1 - 0.05 13.5 0.1 0.12 12.2 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase RNA12 PF10443.9 BAJ51172.1 - 0.082 11.6 0.0 0.14 10.9 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein Pox_A32 PF04665.12 BAJ51172.1 - 0.095 12.1 0.0 0.27 10.6 0.0 1.7 2 0 0 2 2 1 0 Poxvirus A32 protein AAA PF00004.29 BAJ51172.1 - 0.098 13.1 0.0 0.27 11.7 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.22 BAJ51172.1 - 0.099 12.3 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Viral_helicase1 PF01443.18 BAJ51172.1 - 0.1 12.3 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NTPase_1 PF03266.15 BAJ51172.1 - 0.11 12.4 0.0 0.31 10.9 0.0 1.8 1 0 0 1 1 1 0 NTPase TsaE PF02367.17 BAJ51172.1 - 0.12 12.4 0.1 0.32 11.0 0.1 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MobB PF03205.14 BAJ51172.1 - 0.13 12.1 0.0 0.36 10.7 0.0 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ResIII PF04851.15 BAJ51172.1 - 0.15 12.1 0.0 0.29 11.1 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit SRPRB PF09439.10 BAJ51172.1 - 0.15 11.5 0.0 0.36 10.3 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit CbiA PF01656.23 BAJ51172.1 - 0.16 12.1 0.0 0.32 11.0 0.0 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Glu_dehyd_C PF16912.5 BAJ51173.1 - 0.0072 15.8 0.0 0.0088 15.5 0.0 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus Usp PF00582.26 BAJ51174.1 - 2.7e-31 109.0 1.9 3.2e-31 108.7 1.9 1.1 1 0 0 1 1 1 1 Universal stress protein family AP_endonuc_2 PF01261.24 BAJ51174.1 - 0.0049 16.3 0.0 0.0092 15.4 0.0 1.5 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel GAF_2 PF13185.6 BAJ51174.1 - 0.051 13.9 0.0 0.066 13.5 0.0 1.3 1 0 0 1 1 1 0 GAF domain CDPS PF16715.5 BAJ51174.1 - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Cyclodipeptide synthase ABC-3 PF00950.17 BAJ51176.1 - 2.1e-43 148.7 33.9 2.4e-43 148.5 33.9 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 BAJ51176.1 - 0.00034 19.7 34.6 0.0005 19.2 34.6 1.3 1 0 0 1 1 1 1 FecCD transport family ABC_tran PF00005.27 BAJ51177.1 - 1.1e-27 97.2 0.0 1.5e-27 96.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51177.1 - 4.5e-11 43.1 0.1 0.00016 21.6 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ51177.1 - 1.1e-05 25.0 0.1 0.053 13.0 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA PF00004.29 BAJ51177.1 - 0.00028 21.3 0.0 0.017 15.6 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 BAJ51177.1 - 0.00092 18.9 0.1 0.0017 18.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain PIF1 PF05970.14 BAJ51177.1 - 0.0065 15.7 0.1 0.038 13.2 0.0 1.9 2 0 0 2 2 2 1 PIF1-like helicase AAA_30 PF13604.6 BAJ51177.1 - 0.0068 16.1 0.2 0.06 13.1 0.2 2.1 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 BAJ51177.1 - 0.026 14.2 0.2 4.4 7.0 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein NTPase_1 PF03266.15 BAJ51177.1 - 0.027 14.4 0.0 0.065 13.2 0.0 1.8 2 0 0 2 2 2 0 NTPase ATPase_2 PF01637.18 BAJ51177.1 - 0.039 13.9 0.0 0.095 12.6 0.0 1.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 BAJ51177.1 - 0.039 13.7 0.0 0.067 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 BAJ51177.1 - 0.046 14.2 0.2 0.071 13.6 0.2 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 BAJ51177.1 - 0.082 13.2 0.9 0.4 10.9 0.9 2.2 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 BAJ51177.1 - 0.092 12.7 0.8 0.17 11.8 0.8 1.7 1 1 0 1 1 1 0 NACHT domain AAA_16 PF13191.6 BAJ51177.1 - 0.11 12.9 0.0 0.15 12.5 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.6 BAJ51177.1 - 0.22 11.9 0.5 0.44 10.9 0.4 1.8 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 BAJ51177.1 - 3.1 7.3 4.7 2.4 7.7 0.9 2.7 2 1 0 2 2 2 0 AAA domain ZnuA PF01297.17 BAJ51178.1 - 2.8e-58 197.4 0.0 3.2e-58 197.2 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Fe_dep_repr_C PF02742.15 BAJ51179.1 - 1.8e-20 72.8 0.2 3.3e-20 72.0 0.2 1.4 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 BAJ51179.1 - 1.1e-07 31.9 0.1 1.9e-07 31.2 0.1 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 BAJ51179.1 - 5e-05 23.1 0.0 8.6e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 MarR family GntR PF00392.21 BAJ51179.1 - 0.0034 17.0 0.0 0.0058 16.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 BAJ51179.1 - 0.0086 16.0 0.1 0.019 14.9 0.0 1.7 2 0 0 2 2 2 1 MarR family LexA_DNA_bind PF01726.16 BAJ51179.1 - 0.013 15.3 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain HTH_Crp_2 PF13545.6 BAJ51179.1 - 0.042 13.8 0.0 0.084 12.9 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Lipoprotein_8 PF02030.15 BAJ51179.1 - 0.049 12.4 0.0 0.051 12.3 0.0 1.1 1 0 0 1 1 1 0 Hypothetical lipoprotein (MG045 family) DUF4423 PF14394.6 BAJ51179.1 - 0.095 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Rrf2 PF02082.20 BAJ51179.1 - 0.12 12.8 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator NUDIX PF00293.28 BAJ51180.1 - 3e-15 56.4 0.1 3.4e-15 56.3 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain AIRS PF00586.24 BAJ51181.1 - 3.3e-19 69.3 0.0 6.5e-19 68.4 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 BAJ51181.1 - 2e-07 31.3 0.0 3e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Glycos_transf_2 PF00535.26 BAJ51182.1 - 2e-27 96.1 0.0 3.4e-27 95.3 0.0 1.4 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 BAJ51182.1 - 1.3e-09 38.3 0.0 3e-09 37.1 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 BAJ51182.1 - 0.00029 20.4 0.0 0.00039 20.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 BAJ51182.1 - 0.0054 17.2 0.0 0.029 14.9 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase family 2 DnaJ PF00226.31 BAJ51183.1 - 3.9e-10 39.7 0.2 2.4e-09 37.2 0.0 2.2 2 0 0 2 2 2 1 DnaJ domain KIP1 PF07765.12 BAJ51183.1 - 0.036 14.2 0.2 13 6.0 0.0 2.6 2 0 0 2 2 2 0 KIP1-like protein PaREP1 PF05942.11 BAJ51183.1 - 0.075 13.0 0.5 0.16 11.9 0.2 1.7 2 0 0 2 2 2 0 Archaeal PaREP1/PaREP8 family SO_alpha_A3 PF17806.1 BAJ51183.1 - 0.15 12.4 0.2 0.62 10.4 0.0 2.1 3 0 0 3 3 3 0 Sarcosine oxidase A3 domain 4HBT_2 PF13279.6 BAJ51184.1 - 2.3e-06 28.1 0.0 2.7e-06 27.9 0.0 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 BAJ51184.1 - 3.2e-06 26.6 0.0 3.8e-06 26.4 0.0 1.3 1 1 0 1 1 1 1 Acyl-ACP thioesterase 4HBT PF03061.22 BAJ51184.1 - 0.0011 19.3 0.0 0.0015 18.8 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily OB_aCoA_assoc PF01796.17 BAJ51185.1 - 4.5e-19 68.2 1.1 5e-19 68.1 0.4 1.4 2 0 0 2 2 2 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 BAJ51185.1 - 1.4e-15 56.8 2.3 2.4e-15 56.1 2.3 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Sterol-sensing PF12349.8 BAJ51185.1 - 0.023 14.5 0.0 0.025 14.4 0.0 1.1 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation Qn_am_d_aIII PF09099.10 BAJ51185.1 - 0.025 15.0 0.0 0.052 13.9 0.0 1.5 1 1 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain III TackOD1 PF18551.1 BAJ51185.1 - 0.037 13.7 0.1 0.046 13.4 0.1 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 DNA_RNApol_7kD PF03604.13 BAJ51185.1 - 0.31 10.7 3.0 0.43 10.3 0.2 2.2 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Thiolase_C PF02803.18 BAJ51186.1 - 0.022 14.4 0.0 0.47 10.1 0.0 2.3 2 0 0 2 2 2 0 Thiolase, C-terminal domain Ald_Xan_dh_C2 PF02738.18 BAJ51187.1 - 2.2e-165 551.3 1.3 2.5e-165 551.1 1.3 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ51187.1 - 1.1e-30 106.2 0.0 2.8e-29 101.7 0.0 2.9 2 0 0 2 2 2 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RNase_II_C_S1 PF18614.1 BAJ51187.1 - 0.058 13.3 0.6 0.19 11.7 0.6 1.9 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain Acyl-CoA_dh_1 PF00441.24 BAJ51188.1 - 2.6e-38 131.6 0.0 3.5e-38 131.1 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 BAJ51188.1 - 8.8e-21 73.9 0.0 1.4e-20 73.3 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 BAJ51188.1 - 4.5e-20 72.4 0.3 4.5e-20 72.4 0.3 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 BAJ51188.1 - 1.6e-19 70.5 0.9 2.5e-19 69.9 0.9 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain PALP PF00291.25 BAJ51189.1 - 5.4e-36 124.5 0.0 6.5e-36 124.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ERCC4 PF02732.15 BAJ51190.1 - 1.5e-10 41.5 0.0 2.3e-10 40.9 0.0 1.3 1 0 0 1 1 1 1 ERCC4 domain Peripla_BP_6 PF13458.6 BAJ51191.1 - 9.2e-39 134.0 2.1 1.1e-38 133.7 2.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 BAJ51191.1 - 1.1e-12 47.7 0.0 1.4e-11 44.1 0.0 2.1 1 1 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 BAJ51191.1 - 4.1e-09 35.9 0.0 9.7e-06 24.8 0.0 2.8 2 1 0 2 2 2 2 Periplasmic binding protein domain Ribosomal_L27A PF00828.19 BAJ51191.1 - 0.19 12.4 0.1 0.35 11.5 0.1 1.5 1 0 0 1 1 1 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BPD_transp_2 PF02653.16 BAJ51192.1 - 5.8e-33 114.2 41.0 6.9e-33 114.0 41.0 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF4131 PF13567.6 BAJ51192.1 - 1.2 8.8 23.1 0.25 11.0 2.6 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) Cation_efflux PF01545.21 BAJ51192.1 - 4.7 6.9 32.4 4.7 6.9 8.1 2.9 2 1 0 2 2 2 0 Cation efflux family BPD_transp_2 PF02653.16 BAJ51193.1 - 1.6e-31 109.5 35.2 1.6e-31 109.5 35.2 1.5 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component NB PF04159.13 BAJ51193.1 - 0.26 11.4 1.3 0.47 10.5 0.0 2.2 2 0 0 2 2 2 0 NB glycoprotein ABC_tran PF00005.27 BAJ51194.1 - 1.9e-27 96.4 0.0 4.1e-27 95.4 0.0 1.5 2 0 0 2 2 2 1 ABC transporter BCA_ABC_TP_C PF12399.8 BAJ51194.1 - 6.9e-06 25.9 0.0 1.5e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 BAJ51194.1 - 0.00082 19.3 1.9 0.0027 17.6 0.6 2.3 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 BAJ51194.1 - 0.0037 17.2 0.0 0.013 15.4 0.0 1.8 1 1 1 2 2 2 1 Rad17 P-loop domain AAA_23 PF13476.6 BAJ51194.1 - 0.0046 17.5 0.2 0.0083 16.6 0.2 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 BAJ51194.1 - 0.01 16.1 0.3 0.33 11.2 0.2 2.4 1 1 1 2 2 2 0 AAA domain Zeta_toxin PF06414.12 BAJ51194.1 - 0.011 15.1 0.0 0.67 9.2 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin AAA_14 PF13173.6 BAJ51194.1 - 0.017 15.1 0.0 0.088 12.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 BAJ51194.1 - 0.028 14.2 0.1 0.054 13.2 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_27 PF13514.6 BAJ51194.1 - 0.042 13.4 0.0 0.065 12.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 BAJ51194.1 - 0.061 13.7 0.0 0.11 12.9 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 BAJ51194.1 - 0.083 11.5 0.0 0.1 11.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 BAJ51194.1 - 0.14 11.3 0.1 0.67 9.1 0.1 1.9 2 0 0 2 2 2 0 NB-ARC domain ABC_tran PF00005.27 BAJ51195.1 - 5.8e-30 104.6 0.0 9.4e-30 103.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51195.1 - 4.2e-11 43.2 0.6 1.3e-05 25.2 0.2 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ51195.1 - 2.2e-05 24.0 0.0 0.018 14.5 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAJ51195.1 - 4.7e-05 23.7 0.2 0.0002 21.6 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 BAJ51195.1 - 0.00011 21.9 0.2 0.00041 20.0 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ51195.1 - 0.0003 21.2 0.0 0.00042 20.7 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 BAJ51195.1 - 0.00038 21.0 0.0 0.00053 20.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 BAJ51195.1 - 0.00058 19.5 0.1 0.0012 18.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain IstB_IS21 PF01695.17 BAJ51195.1 - 0.0017 18.1 0.1 0.017 14.9 0.0 2.2 2 1 0 2 2 2 1 IstB-like ATP binding protein AAA_15 PF13175.6 BAJ51195.1 - 0.0017 18.1 0.0 0.0022 17.7 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain SRP54 PF00448.22 BAJ51195.1 - 0.0018 18.0 0.0 0.0034 17.0 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_33 PF13671.6 BAJ51195.1 - 0.0026 17.9 0.0 0.0089 16.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain Dynamin_N PF00350.23 BAJ51195.1 - 0.0027 17.8 0.0 0.006 16.7 0.0 1.5 1 1 0 1 1 1 1 Dynamin family AAA_30 PF13604.6 BAJ51195.1 - 0.0086 15.8 0.5 0.013 15.2 0.3 1.7 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.6 BAJ51195.1 - 0.011 14.4 0.0 0.42 9.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 BAJ51195.1 - 0.013 15.0 0.1 0.029 13.8 0.1 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA PF00004.29 BAJ51195.1 - 0.021 15.3 0.3 0.076 13.4 0.3 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 BAJ51195.1 - 0.024 14.2 0.0 0.054 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 BAJ51195.1 - 0.024 14.5 0.1 0.045 13.6 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 BAJ51195.1 - 0.04 14.0 0.2 0.064 13.3 0.2 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_14 PF13173.6 BAJ51195.1 - 0.041 13.9 0.1 0.21 11.6 0.0 2.2 2 2 0 2 2 2 0 AAA domain T2SSE PF00437.20 BAJ51195.1 - 0.052 12.6 1.1 0.071 12.1 0.1 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein NACHT PF05729.12 BAJ51195.1 - 0.057 13.3 0.7 0.26 11.2 0.4 2.0 2 0 0 2 2 2 0 NACHT domain ABC_ATPase PF09818.9 BAJ51195.1 - 0.061 12.1 0.1 9.3 4.9 0.0 2.8 3 0 0 3 3 3 0 Predicted ATPase of the ABC class AAA_28 PF13521.6 BAJ51195.1 - 0.066 13.5 1.6 0.077 13.2 0.2 1.9 2 1 0 2 2 2 0 AAA domain Rad17 PF03215.15 BAJ51195.1 - 0.12 12.3 0.0 0.22 11.4 0.0 1.4 2 0 0 2 2 1 0 Rad17 P-loop domain DLIC PF05783.11 BAJ51195.1 - 0.12 11.2 0.1 0.19 10.5 0.1 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) ATPase_2 PF01637.18 BAJ51195.1 - 0.13 12.2 0.0 0.23 11.3 0.0 1.7 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 BAJ51195.1 - 0.16 11.1 0.1 0.35 10.0 0.1 1.5 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.6 BAJ51195.1 - 0.17 11.6 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF3584 PF12128.8 BAJ51195.1 - 0.2 9.1 0.0 0.28 8.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) SbcCD_C PF13558.6 BAJ51195.1 - 0.21 11.8 0.5 0.77 10.0 0.1 2.1 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit cobW PF02492.19 BAJ51195.1 - 0.23 11.0 0.6 0.7 9.4 0.2 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Amidohydro_1 PF01979.20 BAJ51196.1 - 2.6e-44 151.9 0.0 3.1e-44 151.7 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 BAJ51196.1 - 1.7e-16 60.8 0.1 5.8e-15 55.7 0.0 2.8 1 1 1 2 2 2 1 Amidohydrolase family LAGLIDADG_3 PF14528.6 BAJ51197.1 - 9.8e-12 45.0 0.0 1.2e-08 35.1 0.0 2.2 2 0 0 2 2 2 2 LAGLIDADG-like domain LAGLIDADG_WhiA PF14527.6 BAJ51197.1 - 0.0014 18.7 0.0 1.9 8.6 0.0 2.2 2 0 0 2 2 2 2 WhiA LAGLIDADG-like domain LEM PF03020.15 BAJ51197.1 - 0.074 12.6 2.7 1.1 8.8 0.0 2.8 3 0 0 3 3 3 0 LEM domain LAGLIDADG_1 PF00961.19 BAJ51198.1 - 8.5e-18 65.2 0.0 2.5e-11 44.5 0.0 2.5 2 0 0 2 2 2 2 LAGLIDADG endonuclease DUF1308 PF07000.11 BAJ51198.1 - 0.14 12.1 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1308) LAGLIDADG_3 PF14528.6 BAJ51198.1 - 0.15 12.4 0.1 2 8.8 0.0 2.7 2 1 0 2 2 2 0 LAGLIDADG-like domain HECW1_helix PF18436.1 BAJ51198.1 - 0.3 11.2 1.2 0.72 10.0 0.2 2.2 2 0 0 2 2 2 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 LAGLIDADG_3 PF14528.6 BAJ51199.1 - 1e-06 28.9 0.0 0.0022 18.3 0.0 2.3 2 0 0 2 2 2 2 LAGLIDADG-like domain LAGLIDADG_1 PF00961.19 BAJ51199.1 - 0.07 14.1 0.1 4.7 8.2 0.0 2.5 2 1 0 2 2 2 0 LAGLIDADG endonuclease FAD_oxidored PF12831.7 BAJ51200.1 - 1.5e-08 34.5 0.8 2.6e-08 33.6 0.8 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 BAJ51200.1 - 2.7e-08 33.8 0.5 0.0016 18.1 0.0 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 BAJ51200.1 - 4.1e-07 29.6 0.9 0.00036 19.9 0.2 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 BAJ51200.1 - 6.9e-07 28.3 4.9 0.00066 18.5 0.0 2.8 3 0 0 3 3 3 2 HI0933-like protein Lycopene_cycl PF05834.12 BAJ51200.1 - 4.3e-06 26.0 0.6 0.00032 19.9 0.1 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein FAD_binding_3 PF01494.19 BAJ51200.1 - 6.8e-06 25.6 9.1 2.2e-05 23.9 3.0 2.9 2 1 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 BAJ51200.1 - 1.7e-05 24.3 2.4 0.031 13.5 0.1 2.8 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 BAJ51200.1 - 2.2e-05 23.8 0.1 6.8e-05 22.2 0.1 1.8 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 BAJ51200.1 - 0.001 18.2 0.3 0.0098 15.0 0.2 2.2 2 0 0 2 2 2 1 FAD binding domain Amino_oxidase PF01593.24 BAJ51200.1 - 0.0021 17.4 3.1 0.13 11.5 0.0 3.0 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 BAJ51200.1 - 0.016 15.4 0.0 0.052 13.8 0.0 1.9 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 BAJ51200.1 - 0.02 15.4 0.7 3.4 8.3 0.1 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 BAJ51200.1 - 0.029 13.5 3.0 0.12 11.4 0.0 2.3 2 0 0 2 2 2 0 Glucose inhibited division protein A TfuA PF07812.12 BAJ51200.1 - 1.6 8.4 4.9 0.29 10.9 0.2 2.1 3 0 0 3 3 3 0 TfuA-like protein E1_dh PF00676.20 BAJ51201.1 - 4.1e-85 285.3 0.0 4.8e-85 285.1 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 BAJ51201.1 - 7e-06 25.9 1.3 9e-05 22.3 0.3 2.5 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 BAJ51201.1 - 1.3e-05 24.5 0.0 2.2e-05 23.8 0.0 1.3 1 1 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase RNase_J_C PF17770.1 BAJ51201.1 - 0.029 15.4 0.0 0.054 14.5 0.0 1.4 1 0 0 1 1 1 0 Ribonuclease J C-terminal domain DUF35_N PF12172.8 BAJ51202.1 - 1.8e-05 24.5 0.3 2.7e-05 24.0 0.3 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 BAJ51202.1 - 0.094 12.7 0.4 0.14 12.2 0.4 1.3 1 0 0 1 1 1 0 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 BAJ51203.1 - 1.3e-08 34.6 3.6 2.2e-08 33.8 3.6 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 BAJ51203.1 - 1.6e-08 34.5 0.3 2.5e-08 33.8 0.3 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DZR PF12773.7 BAJ51203.1 - 0.045 13.8 0.1 0.075 13.1 0.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon Thiolase_N PF00108.23 BAJ51204.1 - 3e-10 39.9 0.0 6.1e-09 35.6 0.0 2.5 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 BAJ51204.1 - 1.1e-05 25.1 0.0 0.016 14.9 0.0 3.3 3 0 0 3 3 3 2 Thiolase, C-terminal domain DXP_redisom_C PF08436.12 BAJ51204.1 - 0.019 15.1 0.0 0.36 11.0 0.0 2.6 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ThiJ_like PF17124.5 BAJ51204.1 - 0.11 12.1 0.5 0.23 11.1 0.1 1.6 2 0 0 2 2 2 0 ThiJ/PfpI family-like DUF2797 PF10977.8 BAJ51204.1 - 0.24 11.3 0.2 0.54 10.1 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2797) Thiolase_C PF02803.18 BAJ51205.1 - 2.6e-06 27.1 0.1 7.6e-06 25.6 0.0 1.8 2 0 0 2 2 2 1 Thiolase, C-terminal domain Acyl-CoA_dh_1 PF00441.24 BAJ51206.1 - 1.3e-31 109.9 0.3 1.9e-31 109.3 0.3 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 BAJ51206.1 - 4.3e-17 62.1 0.0 7e-17 61.4 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 BAJ51206.1 - 2e-11 44.3 2.0 3.5e-11 43.5 2.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 BAJ51206.1 - 1.2e-05 25.9 0.3 3.3e-05 24.5 0.0 1.8 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain HpaB_N PF11794.8 BAJ51206.1 - 0.022 14.4 0.0 0.033 13.9 0.0 1.2 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal DUF4405 PF14358.6 BAJ51207.1 - 0.0021 18.6 9.3 0.33 11.5 1.2 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4405) DUF1634 PF07843.11 BAJ51207.1 - 5.1 7.2 8.8 0.34 11.0 0.6 2.8 4 0 0 4 4 4 0 Protein of unknown function (DUF1634) AMP-binding PF00501.28 BAJ51208.1 - 4.2e-43 147.5 0.0 5e-43 147.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 BAJ51208.1 - 6.9e-09 35.5 0.8 6.9e-09 35.5 0.8 2.8 3 0 0 3 3 3 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 BAJ51208.1 - 0.046 14.7 0.0 0.16 12.9 0.0 2.0 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain COX1 PF00115.20 BAJ51209.1 - 3.4e-05 22.9 16.6 3.4e-05 22.9 16.6 1.8 1 1 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF4386 PF14329.6 BAJ51209.1 - 0.092 12.6 16.5 0.17 11.7 16.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4386) Snf7 PF03357.21 BAJ51210.1 - 5.3e-06 26.1 0.4 6.2e-06 25.9 0.4 1.1 1 0 0 1 1 1 1 Snf7 DUF948 PF06103.11 BAJ51210.1 - 0.019 15.2 0.0 0.059 13.6 0.0 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) LOH1CR12 PF10158.9 BAJ51210.1 - 0.021 14.9 0.3 0.06 13.4 0.3 1.7 2 0 0 2 2 2 0 Tumour suppressor protein SpecificRecomb PF10136.9 BAJ51210.1 - 0.031 12.6 0.0 0.034 12.5 0.0 1.1 1 0 0 1 1 1 0 Site-specific recombinase tRNA-synt_1 PF00133.22 BAJ51211.1 - 1.5e-57 195.2 0.0 2.4e-48 164.8 0.0 2.4 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 BAJ51211.1 - 1.4e-20 73.4 0.1 1.2e-09 37.4 0.0 4.0 4 0 0 4 4 4 2 tRNA synthetases class I (M) Anticodon_1 PF08264.13 BAJ51211.1 - 4.1e-16 59.3 0.0 1.1e-15 57.9 0.0 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 BAJ51211.1 - 8.1e-13 48.4 0.1 4.6e-08 32.7 0.0 3.2 2 1 1 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 BAJ51211.1 - 4e-08 33.0 0.0 9.6e-08 31.8 0.0 1.6 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 BAJ51211.1 - 0.026 13.5 0.0 0.14 11.1 0.0 2.0 2 0 0 2 2 2 0 tRNA synthetases class I (K) DrsE PF02635.15 BAJ51212.1 - 4.3e-08 33.5 0.0 4.9e-08 33.4 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family GMC_oxred_C PF05199.13 BAJ51212.1 - 0.038 14.5 0.0 0.077 13.5 0.0 1.5 1 1 0 1 1 1 0 GMC oxidoreductase NTP_transf_2 PF01909.23 BAJ51213.1 - 1.7e-07 31.4 0.1 2.6e-07 30.8 0.1 1.4 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ51213.1 - 1e-06 28.8 0.0 1.8e-06 27.9 0.0 1.6 1 1 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF294 PF03445.13 BAJ51213.1 - 0.0042 16.9 0.0 0.0068 16.2 0.0 1.4 1 0 0 1 1 1 1 Putative nucleotidyltransferase DUF294 HEPN PF05168.14 BAJ51214.1 - 2.7e-14 53.3 0.0 3.4e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 HEPN domain NMT1 PF09084.11 BAJ51215.1 - 1.4e-44 152.6 0.1 1.8e-44 152.3 0.1 1.1 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 BAJ51215.1 - 8.9e-09 35.4 0.3 9.3e-08 32.1 0.3 2.2 1 1 0 1 1 1 1 NMT1-like family SBP_bac_3 PF00497.20 BAJ51215.1 - 0.0095 15.4 0.0 0.052 13.0 0.0 2.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Bmp PF02608.14 BAJ51215.1 - 0.048 12.6 0.0 0.08 11.9 0.0 1.3 1 0 0 1 1 1 0 ABC transporter substrate-binding protein PnrA-like OpuAC PF04069.12 BAJ51215.1 - 0.067 12.8 0.3 0.92 9.0 0.3 2.4 1 1 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system ABC_tran PF00005.27 BAJ51216.1 - 2e-30 106.1 0.0 2.8e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51216.1 - 2.3e-09 37.5 0.3 0.001 19.0 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 BAJ51216.1 - 0.0005 20.4 0.2 0.0032 17.8 0.2 2.1 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 BAJ51216.1 - 0.0011 18.9 0.0 0.0021 18.0 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_23 PF13476.6 BAJ51216.1 - 0.0016 18.9 0.1 0.0025 18.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 BAJ51216.1 - 0.0023 17.5 0.1 0.081 12.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 BAJ51216.1 - 0.0027 18.1 0.0 0.0039 17.6 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 BAJ51216.1 - 0.0032 17.2 0.0 0.0066 16.2 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 BAJ51216.1 - 0.0039 16.9 0.0 0.0071 16.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 BAJ51216.1 - 0.007 15.8 0.0 0.13 11.6 0.1 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 BAJ51216.1 - 0.0086 15.8 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 BAJ51216.1 - 0.025 14.5 0.1 0.045 13.6 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 BAJ51216.1 - 0.027 14.9 0.3 0.05 14.0 0.3 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 BAJ51216.1 - 0.032 14.2 0.1 0.077 12.9 0.1 1.6 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 BAJ51216.1 - 0.058 13.4 0.0 0.15 12.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 BAJ51216.1 - 0.063 12.4 1.6 0.23 10.6 1.6 1.9 1 1 0 1 1 1 0 NB-ARC domain TniB PF05621.11 BAJ51216.1 - 0.11 11.9 0.0 1 8.8 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_11 PF13086.6 BAJ51216.1 - 0.13 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 BAJ51216.1 - 0.15 12.5 0.1 0.36 11.2 0.0 1.6 2 0 0 2 2 1 0 RNA helicase ABC_ATPase PF09818.9 BAJ51216.1 - 0.2 10.4 0.0 7.5 5.2 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class BPD_transp_1 PF00528.22 BAJ51217.1 - 1.7e-22 80.1 19.4 1.7e-22 80.1 19.4 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF61 PF01886.16 BAJ51218.1 - 3.1e-32 111.3 0.0 3.6e-32 111.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF61 Phage_holin_2_1 PF04971.12 BAJ51219.1 - 0.089 12.8 0.1 0.089 12.8 0.1 2.0 2 1 0 2 2 2 0 Bacteriophage P21 holin S DUF543 PF04418.12 BAJ51219.1 - 0.4 10.7 4.1 12 6.0 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF543) DUF4231 PF14015.6 BAJ51219.1 - 0.83 10.1 3.9 1.1 9.7 3.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) FUN14 PF04930.15 BAJ51219.1 - 6 7.3 9.8 6.5 7.2 2.9 2.3 2 1 0 2 2 2 0 FUN14 family Ribonuc_L-PSP PF01042.21 BAJ51220.1 - 6.1e-39 132.8 0.1 6.8e-39 132.6 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Capsid_NCLDV PF04451.12 BAJ51220.1 - 0.057 13.2 0.0 0.068 13.0 0.0 1.1 1 0 0 1 1 1 0 Large eukaryotic DNA virus major capsid protein LUD_dom PF02589.15 BAJ51221.1 - 1.2e-44 152.4 0.3 2.2e-44 151.4 0.3 1.5 1 0 0 1 1 1 1 LUD domain Fer4_8 PF13183.6 BAJ51221.1 - 5.3e-09 36.4 11.5 5.7e-08 33.1 5.7 2.7 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ51221.1 - 1.1e-08 35.0 2.2 0.00092 19.3 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 BAJ51221.1 - 7.2e-07 29.7 2.3 2.4e-06 28.0 2.3 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 BAJ51221.1 - 1.2e-06 28.0 16.2 0.0013 18.4 3.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain CCG PF02754.16 BAJ51221.1 - 1.7e-06 28.1 0.2 1.3e-05 25.4 0.9 2.2 2 0 0 2 2 2 1 Cysteine-rich domain Fer4_6 PF12837.7 BAJ51221.1 - 2.4e-06 27.4 11.5 0.0054 16.8 2.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 BAJ51221.1 - 1e-05 25.7 9.3 0.0063 16.9 2.2 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 BAJ51221.1 - 6.8e-05 23.0 8.4 0.0031 17.7 9.9 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.6 BAJ51221.1 - 0.00011 21.9 0.9 0.026 14.3 0.1 2.5 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_7 PF12838.7 BAJ51221.1 - 0.00013 22.5 9.1 0.0014 19.2 9.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 BAJ51221.1 - 0.00015 21.9 5.7 0.085 13.0 0.9 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 BAJ51221.1 - 0.00018 21.7 2.4 0.26 11.5 0.3 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 BAJ51221.1 - 0.00034 21.5 6.3 0.41 11.6 1.6 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 BAJ51221.1 - 0.00049 20.0 12.6 0.021 14.9 2.6 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 BAJ51221.1 - 0.0034 17.9 10.6 0.077 13.6 0.3 3.1 3 0 0 3 3 2 2 4Fe-4S single cluster domain of Ferredoxin I DUF460 PF04312.13 BAJ51221.1 - 0.025 14.3 0.0 0.071 12.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF460) Fer4_3 PF12798.7 BAJ51221.1 - 0.025 15.5 14.9 0.19 12.7 3.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 BAJ51221.1 - 0.039 14.8 8.1 1.8 9.5 0.2 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 BAJ51221.1 - 0.051 14.3 2.6 3.3 8.5 0.1 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain LUD_dom PF02589.15 BAJ51222.1 - 2.7e-20 72.9 0.0 1.4e-18 67.3 0.0 2.0 1 1 0 1 1 1 1 LUD domain Peripla_BP_4 PF13407.6 BAJ51222.1 - 0.034 13.7 0.0 0.15 11.6 0.1 1.7 1 1 1 2 2 2 0 Periplasmic binding protein domain OB_RNB PF08206.11 BAJ51222.1 - 0.086 12.5 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain Trm112p PF03966.16 BAJ51223.1 - 2.1e-11 44.2 0.4 4e-11 43.3 0.4 1.5 1 0 0 1 1 1 1 Trm112p-like protein zf-Dof PF02701.15 BAJ51223.1 - 0.035 14.2 0.2 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Dof domain, zinc finger Pox_vIL-18BP PF05566.12 BAJ51223.1 - 0.11 12.7 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Orthopoxvirus interleukin 18 binding protein Glycos_transf_2 PF00535.26 BAJ51224.1 - 8.6e-38 129.8 0.0 1.3e-37 129.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 BAJ51224.1 - 2.5e-35 122.4 0.0 3.6e-35 121.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 BAJ51224.1 - 4e-27 95.4 0.4 4e-27 95.4 0.4 2.2 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 BAJ51224.1 - 6e-15 55.1 0.1 9e-15 54.6 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 BAJ51224.1 - 6e-11 42.3 0.0 1.8e-10 40.8 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Chitin_synth_2 PF03142.15 BAJ51224.1 - 3.1e-10 39.3 0.1 2.3e-08 33.1 0.0 3.0 2 1 1 3 3 3 1 Chitin synthase Glyco_tranf_2_4 PF13704.6 BAJ51224.1 - 1.6e-06 28.5 0.0 4.6e-06 27.1 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_5 PF13712.6 BAJ51224.1 - 0.012 15.3 0.0 0.041 13.6 0.0 1.8 3 0 0 3 3 3 0 Glycosyltransferase like family DNA_pol3_theta PF06440.11 BAJ51224.1 - 0.073 12.7 0.2 0.15 11.8 0.2 1.4 1 0 0 1 1 1 0 DNA polymerase III, theta subunit RrnaAD PF00398.20 BAJ51225.1 - 3.2e-17 62.5 0.0 5.3e-17 61.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 BAJ51225.1 - 4.3e-06 27.3 0.0 7.8e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 BAJ51225.1 - 5e-06 26.3 0.0 6.4e-05 22.7 0.0 2.1 2 0 0 2 2 2 1 Conserved hypothetical protein 95 MTS PF05175.14 BAJ51225.1 - 1.8e-05 24.3 0.0 3.8e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Met_10 PF02475.16 BAJ51225.1 - 2.4e-05 24.2 0.2 0.00014 21.7 0.1 2.0 2 0 0 2 2 2 1 Met-10+ like-protein PrmA PF06325.13 BAJ51225.1 - 0.0004 19.9 0.0 0.00058 19.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 BAJ51225.1 - 0.0005 20.7 0.0 0.00098 19.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAJ51225.1 - 0.001 18.9 0.0 0.0014 18.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAJ51225.1 - 0.049 13.5 0.0 0.065 13.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 BAJ51225.1 - 0.056 13.1 0.0 1.6 8.3 0.0 2.7 2 1 1 3 3 3 0 Putative RNA methylase family UPF0020 Methyltransf_32 PF13679.6 BAJ51225.1 - 0.061 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain SAM_MT PF04445.13 BAJ51225.1 - 0.062 12.7 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase DREV PF05219.12 BAJ51225.1 - 0.12 11.4 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase PCMT PF01135.19 BAJ51225.1 - 0.17 11.6 0.1 0.41 10.4 0.0 1.6 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Macro PF01661.21 BAJ51227.1 - 9.9e-38 128.8 0.0 1.2e-37 128.5 0.0 1.1 1 0 0 1 1 1 1 Macro domain Macro_2 PF14519.6 BAJ51227.1 - 0.16 11.3 0.0 0.62 9.3 0.0 1.7 2 0 0 2 2 2 0 Macro-like domain zinc_ribbon_4 PF13717.6 BAJ51228.1 - 6.9e-05 22.7 0.2 0.19 11.7 0.1 2.2 1 1 1 2 2 2 2 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 BAJ51228.1 - 0.00013 21.8 1.6 0.26 11.2 0.0 2.3 1 1 1 2 2 2 2 SprT-like zinc ribbon domain Peptidase_M50B PF13398.6 BAJ51228.1 - 0.0013 18.4 4.7 0.0017 18.1 4.7 1.1 1 0 0 1 1 1 1 Peptidase M50B-like Zn-ribbon_8 PF09723.10 BAJ51228.1 - 0.0015 18.6 1.8 0.0029 17.7 1.8 1.5 1 1 0 1 1 1 1 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 BAJ51228.1 - 0.0018 17.8 1.2 0.77 9.3 0.1 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding PhnA_Zn_Ribbon PF08274.12 BAJ51228.1 - 0.0024 17.8 0.6 0.11 12.5 0.6 2.2 1 1 1 2 2 2 2 PhnA Zinc-Ribbon zf-NADH-PPase PF09297.11 BAJ51228.1 - 0.0032 17.1 2.7 0.096 12.4 0.1 2.5 3 0 0 3 3 2 1 NADH pyrophosphatase zinc ribbon domain HypA PF01155.19 BAJ51228.1 - 0.0053 16.8 0.3 0.0074 16.3 0.3 1.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 BAJ51228.1 - 0.0081 16.2 0.7 0.012 15.6 0.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 BAJ51228.1 - 0.0083 15.8 5.6 0.087 12.6 5.6 2.1 1 1 0 1 1 1 1 zinc-ribbon domain zf-HYPF PF07503.12 BAJ51228.1 - 0.011 15.5 2.5 1.9 8.3 0.1 2.2 1 1 1 2 2 2 0 HypF finger Rubredoxin_2 PF18073.1 BAJ51228.1 - 0.014 15.1 3.2 0.031 14.0 3.2 1.5 1 1 0 1 1 1 0 Rubredoxin metal binding domain DUF1272 PF06906.11 BAJ51228.1 - 0.023 14.8 1.0 0.042 13.9 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) FYDLN_acid PF09538.10 BAJ51228.1 - 0.025 15.2 0.5 0.11 13.2 0.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) ADK_lid PF05191.14 BAJ51228.1 - 0.031 14.2 0.3 4.4 7.4 0.0 2.3 2 0 0 2 2 2 0 Adenylate kinase, active site lid A2L_zn_ribbon PF08792.10 BAJ51228.1 - 0.074 12.8 3.7 0.45 10.3 3.7 1.9 1 1 0 1 1 1 0 A2L zinc ribbon domain zf_UBZ PF18439.1 BAJ51228.1 - 0.2 11.3 0.8 3.2 7.4 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 BAJ51228.1 - 0.21 11.1 6.5 0.76 9.3 0.8 2.1 1 1 0 2 2 2 0 zinc-ribbon domain zf-trcl PF13451.6 BAJ51228.1 - 0.25 11.3 2.0 8.7 6.3 0.1 2.2 1 1 1 2 2 2 0 Probable zinc-ribbon domain Sarcoglycan_1 PF04790.13 BAJ51228.1 - 0.28 10.5 0.3 0.36 10.1 0.3 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein CpXC PF14353.6 BAJ51228.1 - 0.36 10.9 1.8 1.9 8.5 0.1 2.1 1 1 1 2 2 2 0 CpXC protein zf-RRN7 PF11781.8 BAJ51228.1 - 0.42 10.3 2.9 11 5.8 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Prok-RING_1 PF14446.6 BAJ51228.1 - 0.81 9.7 3.2 11 6.1 0.1 2.1 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 Zn_Tnp_IS1595 PF12760.7 BAJ51228.1 - 2.3 8.3 4.3 6.6 6.8 0.3 2.5 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Nudix_N_2 PF14803.6 BAJ51228.1 - 2.6 8.1 4.7 26 4.8 0.3 2.3 1 1 2 3 3 3 0 Nudix N-terminal DUF1610 PF07754.11 BAJ51228.1 - 6.4 6.8 7.9 3.3 7.7 1.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Rieske PF00355.26 BAJ51229.1 - 1.9e-15 56.6 0.0 2.2e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 BAJ51229.1 - 3.5e-07 30.1 0.0 4e-07 29.9 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Pyr_redox_2 PF07992.14 BAJ51230.1 - 1.1e-50 172.5 5.1 1.3e-50 172.3 5.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 BAJ51230.1 - 7.8e-23 81.2 4.3 7e-20 71.5 0.1 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 BAJ51230.1 - 3.2e-19 69.3 7.6 2.4e-17 63.3 1.1 3.2 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 BAJ51230.1 - 3.3e-07 30.0 5.0 4.5e-07 29.6 0.6 2.3 2 1 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.24 BAJ51230.1 - 6.3e-07 29.3 11.5 0.041 13.5 0.0 4.0 3 1 1 4 4 4 3 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 BAJ51230.1 - 6.8e-07 28.7 8.3 0.00011 21.4 0.9 3.3 2 1 1 3 3 3 2 FAD binding domain GIDA PF01134.22 BAJ51230.1 - 0.0001 21.6 14.9 0.00023 20.4 1.9 4.5 2 2 3 5 5 5 1 Glucose inhibited division protein A Thi4 PF01946.17 BAJ51230.1 - 0.00031 20.1 4.4 0.00068 18.9 0.4 3.0 3 1 1 4 4 4 1 Thi4 family FAD_binding_3 PF01494.19 BAJ51230.1 - 0.00044 19.6 2.5 0.097 11.9 0.1 3.0 2 1 1 3 3 3 1 FAD binding domain NAD_binding_7 PF13241.6 BAJ51230.1 - 0.0021 18.5 2.8 0.41 11.1 0.6 2.7 2 1 0 2 2 2 2 Putative NAD(P)-binding HI0933_like PF03486.14 BAJ51230.1 - 0.0023 16.7 5.7 0.0028 16.4 0.5 3.2 4 1 1 5 5 5 1 HI0933-like protein Lycopene_cycl PF05834.12 BAJ51230.1 - 0.0033 16.5 0.8 0.088 11.8 0.3 2.5 1 1 0 2 2 2 1 Lycopene cyclase protein K_oxygenase PF13434.6 BAJ51230.1 - 0.0053 16.0 1.7 2.1 7.4 0.1 3.3 1 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 BAJ51230.1 - 0.011 16.0 1.7 0.16 12.2 0.3 2.3 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Shikimate_DH PF01488.20 BAJ51230.1 - 0.016 15.2 1.8 0.48 10.5 0.1 2.9 2 1 1 3 3 3 0 Shikimate / quinate 5-dehydrogenase Trp_halogenase PF04820.14 BAJ51230.1 - 0.023 13.5 2.4 0.043 12.7 0.9 2.0 2 0 0 2 2 2 0 Tryptophan halogenase Rieske PF00355.26 BAJ51231.1 - 2.5e-21 75.4 0.0 3.1e-21 75.1 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 BAJ51231.1 - 2e-16 59.8 0.0 2.4e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Urocanase_C PF17392.2 BAJ51231.1 - 0.058 12.8 0.0 0.068 12.6 0.0 1.2 1 0 0 1 1 1 0 Urocanase C-terminal domain TT_ORF2a PF08197.11 BAJ51231.1 - 0.17 11.9 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 pORF2a truncated protein Methyltransf_31 PF13847.6 BAJ51232.1 - 5.2e-14 52.3 0.0 6.6e-14 52.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ51232.1 - 5.9e-13 49.3 0.0 8.6e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 BAJ51232.1 - 2.7e-12 46.5 0.0 3.5e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 BAJ51232.1 - 6.6e-11 42.8 0.0 9.6e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 BAJ51232.1 - 1.3e-10 41.8 0.1 2.9e-10 40.7 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 BAJ51232.1 - 4e-07 30.0 0.0 5.9e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 BAJ51232.1 - 9.4e-07 28.8 0.0 1.6e-06 28.1 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 BAJ51232.1 - 7.1e-06 26.1 0.0 8.7e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 BAJ51232.1 - 0.00021 20.7 0.0 0.00026 20.4 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltr_RsmB-F PF01189.17 BAJ51232.1 - 0.00035 20.3 0.0 0.00049 19.8 0.0 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F MTS PF05175.14 BAJ51232.1 - 0.00038 20.1 0.0 0.00052 19.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Fibrillarin PF01269.17 BAJ51232.1 - 0.0038 16.4 0.0 0.095 11.8 0.0 2.1 2 0 0 2 2 2 1 Fibrillarin Methyltransf_4 PF02390.17 BAJ51232.1 - 0.015 14.8 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase PrmA PF06325.13 BAJ51232.1 - 0.022 14.2 0.0 0.028 13.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 BAJ51232.1 - 0.032 14.2 0.0 0.059 13.3 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain FmrO PF07091.11 BAJ51232.1 - 0.093 12.3 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) DOT1 PF08123.13 BAJ51232.1 - 0.097 12.2 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 DREV PF05219.12 BAJ51232.1 - 0.1 11.7 0.0 0.55 9.3 0.0 1.8 1 1 0 2 2 2 0 DREV methyltransferase FtsJ PF01728.19 BAJ51232.1 - 0.12 12.4 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Cons_hypoth95 PF03602.15 BAJ51232.1 - 0.13 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 GidB PF02527.15 BAJ51232.1 - 0.18 11.1 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_3 PF01596.17 BAJ51232.1 - 0.19 10.9 0.0 0.23 10.6 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase DNA_pol_E_B PF04042.16 BAJ51233.1 - 2.1e-15 56.6 0.0 3.5e-15 55.9 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos PF00149.28 BAJ51233.1 - 1.4e-07 32.2 0.0 2.1e-07 31.6 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 BAJ51233.1 - 2.6e-05 24.5 0.0 9.8e-05 22.6 0.0 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain tRNA_anti-codon PF01336.25 BAJ51233.1 - 0.03 14.3 0.0 0.061 13.3 0.0 1.5 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain FIST_C PF10442.9 BAJ51233.1 - 0.099 12.6 0.0 19 5.2 0.0 2.5 1 1 0 2 2 2 0 FIST C domain CHASE2 PF05226.11 BAJ51233.1 - 0.12 12.0 0.1 0.27 10.9 0.1 1.7 1 1 0 1 1 1 0 CHASE2 domain PQQ_2 PF13360.6 BAJ51234.1 - 5.9e-10 39.1 0.2 6.7e-08 32.4 0.2 2.6 1 1 1 2 2 2 2 PQQ-like domain Mu-transpos_C PF09299.11 BAJ51234.1 - 0.06 13.3 0.2 0.17 11.8 0.0 1.8 2 0 0 2 2 2 0 Mu transposase, C-terminal ABC_tran PF00005.27 BAJ51236.1 - 1.3e-29 103.5 0.0 2.1e-29 102.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51236.1 - 3.4e-12 46.8 5.9 9.7e-06 25.6 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAJ51236.1 - 1.2e-05 25.9 0.1 2.2e-05 25.1 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 BAJ51236.1 - 8.4e-05 22.2 0.0 0.00019 21.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 BAJ51236.1 - 9e-05 22.3 0.0 0.00035 20.4 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 BAJ51236.1 - 0.00013 21.8 0.0 0.00043 20.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 BAJ51236.1 - 0.00027 20.4 0.2 0.11 11.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAJ51236.1 - 0.0013 19.1 0.4 0.0088 16.3 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 BAJ51236.1 - 0.0014 18.2 0.2 0.011 15.3 0.2 2.2 1 1 0 1 1 1 1 AAA domain MukB PF04310.12 BAJ51236.1 - 0.0031 17.3 0.0 0.0051 16.7 0.0 1.3 1 0 0 1 1 1 1 MukB N-terminal RsgA_GTPase PF03193.16 BAJ51236.1 - 0.008 16.1 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_27 PF13514.6 BAJ51236.1 - 0.022 14.4 0.0 0.036 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 BAJ51236.1 - 0.028 14.5 0.3 0.11 12.6 0.3 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase SRP54 PF00448.22 BAJ51236.1 - 0.035 13.7 0.4 0.091 12.4 0.2 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_19 PF13245.6 BAJ51236.1 - 0.044 14.1 0.2 0.12 12.6 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 BAJ51236.1 - 0.059 13.8 0.0 0.1 13.0 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_28 PF13521.6 BAJ51236.1 - 0.086 13.1 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 AAA domain HTH_27 PF13463.6 BAJ51236.1 - 0.14 12.7 0.0 0.33 11.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain ABC_tran PF00005.27 BAJ51237.1 - 2.8e-25 89.4 0.0 3.7e-25 89.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 BAJ51237.1 - 2e-09 37.1 0.5 5.4e-09 35.8 0.0 2.0 2 0 0 2 2 2 1 Branched-chain amino acid ATP-binding cassette transporter AAA_30 PF13604.6 BAJ51237.1 - 3e-05 23.8 0.1 5.6e-05 23.0 0.1 1.4 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 BAJ51237.1 - 5e-05 23.2 0.2 0.0011 18.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 BAJ51237.1 - 0.0005 19.7 0.8 0.17 11.4 0.3 2.4 2 1 0 2 2 2 2 AAA domain AAA_23 PF13476.6 BAJ51237.1 - 0.0025 18.3 0.2 0.0046 17.5 0.1 1.4 2 0 0 2 2 1 1 AAA domain AAA PF00004.29 BAJ51237.1 - 0.0059 17.0 0.3 0.098 13.1 0.3 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAJ51237.1 - 0.0064 16.9 0.0 0.01 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 BAJ51237.1 - 0.0087 15.8 0.0 0.022 14.5 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 BAJ51237.1 - 0.012 15.9 0.8 0.15 12.4 0.8 2.1 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 BAJ51237.1 - 0.019 14.4 1.0 1.6 8.1 0.2 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 BAJ51237.1 - 0.029 13.2 0.3 0.029 13.2 0.3 1.9 2 0 0 2 2 2 0 Predicted ATPase of the ABC class TniB PF05621.11 BAJ51237.1 - 0.036 13.5 0.5 0.53 9.7 0.2 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_15 PF13175.6 BAJ51237.1 - 0.057 13.1 0.0 0.063 13.0 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Asparaginase_2 PF01112.18 BAJ51237.1 - 0.059 12.4 0.2 0.093 11.7 0.2 1.3 1 0 0 1 1 1 0 Asparaginase MMR_HSR1 PF01926.23 BAJ51237.1 - 0.061 13.4 0.2 0.11 12.5 0.2 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 BAJ51237.1 - 0.11 12.4 0.1 0.22 11.4 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_14 PF13173.6 BAJ51237.1 - 0.14 12.1 0.4 14 5.7 0.1 2.4 2 1 0 2 2 2 0 AAA domain TsaE PF02367.17 BAJ51237.1 - 0.16 11.9 0.0 0.5 10.4 0.0 1.8 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE BPD_transp_2 PF02653.16 BAJ51238.1 - 5e-37 127.5 33.6 7e-37 127.0 33.6 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 BAJ51239.1 - 2.9e-34 118.5 36.7 3.3e-34 118.3 36.7 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peripla_BP_6 PF13458.6 BAJ51240.1 - 1.2e-54 186.2 1.2 1.5e-54 186.0 1.2 1.0 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 BAJ51240.1 - 8.7e-21 74.3 0.0 2.2e-20 72.9 0.0 1.6 1 1 0 1 1 1 1 Periplasmic binding protein domain Glyco_trans_4_2 PF13477.6 BAJ51240.1 - 0.082 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase 4-like YjeF_N PF03853.15 BAJ51241.1 - 4e-40 137.5 0.3 5.7e-40 137.0 0.3 1.2 1 0 0 1 1 1 1 YjeF-related protein N-terminus tRNA-synt_2b PF00587.25 BAJ51242.1 - 3e-35 121.8 0.0 4.5e-35 121.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 BAJ51242.1 - 1.4e-24 86.4 3.0 2.1e-24 85.8 3.0 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain TRPM_tetra PF16519.5 BAJ51242.1 - 0.0025 17.9 1.2 0.0075 16.3 1.2 1.7 1 0 0 1 1 1 1 Tetramerisation domain of TRPM HOOK PF05622.12 BAJ51242.1 - 0.0033 15.7 1.3 0.0046 15.2 1.3 1.1 1 0 0 1 1 1 1 HOOK protein DUF677 PF05055.12 BAJ51242.1 - 0.044 12.7 0.8 0.067 12.1 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF677) TMF_TATA_bd PF12325.8 BAJ51242.1 - 0.12 12.6 7.0 0.24 11.6 7.0 1.4 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding MtrB PF05440.12 BAJ51242.1 - 0.16 12.4 0.1 0.71 10.3 0.0 2.0 3 0 0 3 3 3 0 Tetrahydromethanopterin S-methyltransferase subunit B Baculo_PEP_C PF04513.12 BAJ51242.1 - 0.17 11.9 0.1 0.33 11.0 0.1 1.4 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1690 PF07956.11 BAJ51242.1 - 0.35 11.3 2.8 0.59 10.5 2.8 1.3 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) Spc7 PF08317.11 BAJ51242.1 - 0.43 9.4 4.1 0.71 8.7 4.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein FapA PF03961.13 BAJ51242.1 - 0.53 8.8 2.2 0.77 8.3 2.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A FtsX PF02687.21 BAJ51243.1 - 2.1e-14 53.8 0.7 2.1e-14 53.8 0.7 2.9 3 0 0 3 3 3 1 FtsX-like permease family MacB_PCD PF12704.7 BAJ51243.1 - 2.2e-14 54.3 1.7 2.2e-14 54.3 1.7 2.4 3 1 1 4 4 4 1 MacB-like periplasmic core domain EI24 PF07264.11 BAJ51243.1 - 0.11 12.7 4.9 0.063 13.5 2.5 1.7 2 0 0 2 2 2 0 Etoposide-induced protein 2.4 (EI24) NPCBM_assoc PF10633.9 BAJ51244.1 - 1e-07 32.1 3.3 0.0061 16.8 0.2 4.7 4 2 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 BAJ51244.1 - 2.3e-07 31.0 2.1 0.021 15.1 0.0 3.4 3 1 1 4 4 4 2 CARDB TRAP_beta PF05753.14 BAJ51244.1 - 0.0018 17.7 2.7 0.96 8.8 0.2 3.5 3 1 0 3 3 3 2 Translocon-associated protein beta (TRAPB) Alpha_adaptinC2 PF02883.20 BAJ51244.1 - 0.013 15.8 2.0 0.02 15.2 0.2 2.3 2 1 0 2 2 2 0 Adaptin C-terminal domain PHTB1_C PF14728.6 BAJ51244.1 - 0.053 12.6 0.3 6.4 5.8 0.1 2.2 2 0 0 2 2 2 0 PTHB1 C-terminus TRAP_alpha PF03896.16 BAJ51244.1 - 0.16 11.1 0.2 2.6 7.2 0.1 2.1 2 0 0 2 2 2 0 Translocon-associated protein (TRAP), alpha subunit DUF11 PF01345.18 BAJ51244.1 - 7.2 7.0 5.9 1.4e+02 2.9 0.7 3.9 3 2 0 3 3 3 0 Domain of unknown function DUF11 NPCBM_assoc PF10633.9 BAJ51245.1 - 0.023 15.0 0.1 1.4 9.2 0.0 2.3 2 0 0 2 2 2 0 NPCBM-associated, NEW3 domain of alpha-galactosidase ABC_tran PF00005.27 BAJ51246.1 - 5.1e-36 124.2 0.0 7.2e-36 123.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 BAJ51246.1 - 7.6e-10 38.6 0.6 4.1e-06 26.4 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAJ51246.1 - 2e-08 34.4 0.3 0.0013 18.6 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 BAJ51246.1 - 6.2e-07 30.0 0.1 1.4e-06 28.8 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 BAJ51246.1 - 1.8e-05 24.4 0.0 3.3e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.6 BAJ51246.1 - 3.7e-05 22.6 0.0 0.00027 19.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 BAJ51246.1 - 0.00011 22.5 0.1 0.00087 19.6 0.1 2.1 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 BAJ51246.1 - 0.00011 22.2 0.2 0.00026 20.9 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase IstB_IS21 PF01695.17 BAJ51246.1 - 0.00042 20.1 0.1 0.044 13.5 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_15 PF13175.6 BAJ51246.1 - 0.00064 19.5 0.0 0.52 10.0 0.0 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 BAJ51246.1 - 0.0013 19.2 0.0 0.0026 18.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 BAJ51246.1 - 0.0016 18.2 0.1 0.027 14.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_24 PF13479.6 BAJ51246.1 - 0.0042 16.8 0.1 0.044 13.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 BAJ51246.1 - 0.0058 16.7 2.3 0.016 15.3 0.2 2.4 1 1 0 2 2 2 1 50S ribosome-binding GTPase NB-ARC PF00931.22 BAJ51246.1 - 0.0076 15.5 0.2 0.55 9.4 0.0 2.1 2 0 0 2 2 2 1 NB-ARC domain NTPase_1 PF03266.15 BAJ51246.1 - 0.008 16.1 0.6 3.4 7.6 0.0 2.3 2 0 0 2 2 2 2 NTPase AAA_28 PF13521.6 BAJ51246.1 - 0.0081 16.4 0.0 0.042 14.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 BAJ51246.1 - 0.0088 15.6 0.0 0.13 11.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 BAJ51246.1 - 0.01 14.9 1.3 0.031 13.3 0.0 2.1 1 1 1 2 2 2 0 Type II/IV secretion system protein NACHT PF05729.12 BAJ51246.1 - 0.011 15.7 0.6 0.24 11.3 0.1 2.4 1 1 1 2 2 2 0 NACHT domain G-alpha PF00503.20 BAJ51246.1 - 0.012 14.7 0.0 0.013 14.7 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_33 PF13671.6 BAJ51246.1 - 0.013 15.7 0.4 0.036 14.2 0.4 2.0 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 BAJ51246.1 - 0.014 15.0 0.3 0.023 14.3 0.3 1.7 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain HK PF02110.15 BAJ51246.1 - 0.017 14.5 0.4 0.041 13.3 0.2 1.7 2 0 0 2 2 2 0 Hydroxyethylthiazole kinase family AAA_18 PF13238.6 BAJ51246.1 - 0.018 15.6 0.4 0.28 11.7 0.1 2.4 2 1 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 BAJ51246.1 - 0.028 14.7 0.0 0.42 10.9 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Glyco_transf_4 PF13439.6 BAJ51246.1 - 0.045 13.8 0.1 0.11 12.4 0.0 1.6 2 0 0 2 2 2 0 Glycosyltransferase Family 4 Dynamin_N PF00350.23 BAJ51246.1 - 0.058 13.5 0.2 0.2 11.7 0.0 1.9 2 1 0 2 2 2 0 Dynamin family MobB PF03205.14 BAJ51246.1 - 0.069 13.0 0.1 2.9 7.8 0.0 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B SHMT PF00464.19 BAJ51247.1 - 2e-81 273.6 0.0 3e-81 273.0 0.0 1.2 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 BAJ51247.1 - 2e-08 33.8 0.0 5.2e-08 32.4 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 BAJ51247.1 - 1.5e-07 31.0 0.0 3.1e-07 30.0 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase SelA PF03841.13 BAJ51247.1 - 3e-05 23.2 0.0 4.9e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.19 BAJ51247.1 - 0.0003 19.8 0.2 0.0012 17.9 0.2 1.9 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 BAJ51247.1 - 0.0093 15.3 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family PFOR_II PF17147.4 BAJ51247.1 - 0.026 14.8 0.0 0.069 13.5 0.0 1.7 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II Aminotran_3 PF00202.21 BAJ51248.1 - 1.9e-61 208.0 0.0 2.3e-61 207.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 BAJ51248.1 - 0.027 13.7 0.0 0.24 10.5 0.0 2.0 1 1 0 1 1 1 0 Aminotransferase class I and II NUDIX PF00293.28 BAJ51249.1 - 6.5e-18 65.0 0.1 8.5e-18 64.7 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 BAJ51249.1 - 0.009 16.0 0.0 0.012 15.6 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain UPF0051 PF01458.17 BAJ51250.1 - 9.3e-57 192.2 1.2 1.2e-56 191.9 1.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) DZR PF12773.7 BAJ51251.1 - 0.00062 19.7 4.1 0.26 11.3 2.8 2.3 1 1 1 2 2 2 2 Double zinc ribbon ArfGap PF01412.18 BAJ51251.1 - 0.046 13.8 2.3 1.4 9.0 0.3 2.2 1 1 1 2 2 2 0 Putative GTPase activating protein for Arf Rubredoxin_2 PF18073.1 BAJ51251.1 - 0.051 13.3 5.4 5 6.9 0.2 3.5 3 0 0 3 3 3 0 Rubredoxin metal binding domain LIM PF00412.22 BAJ51251.1 - 0.29 11.4 3.6 0.95 9.7 0.2 2.3 1 1 1 2 2 2 0 LIM domain C1_2 PF03107.16 BAJ51251.1 - 0.44 10.9 3.9 16 5.9 4.7 2.6 1 1 1 2 2 2 0 C1 domain TF_Zn_Ribbon PF08271.12 BAJ51251.1 - 0.83 9.2 12.4 1.3 8.6 0.0 3.9 3 1 0 3 3 3 0 TFIIB zinc-binding RNA_POL_M_15KD PF02150.16 BAJ51251.1 - 1.1 9.2 5.0 1.7 8.6 0.0 3.1 2 1 1 3 3 3 0 RNA polymerases M/15 Kd subunit Zn-ribbon_8 PF09723.10 BAJ51251.1 - 4.7 7.4 13.3 5.7 7.1 5.1 3.3 3 1 0 3 3 3 0 Zinc ribbon domain zf-dskA_traR PF01258.17 BAJ51251.1 - 6.1 6.9 15.2 12 5.9 3.9 3.8 3 1 0 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger HTH_Crp_2 PF13545.6 BAJ51252.1 - 0.00011 22.1 0.0 0.0029 17.5 0.0 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain TrmB PF01978.19 BAJ51252.1 - 0.00031 20.6 1.0 0.0011 18.7 0.1 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 BAJ51252.1 - 0.0033 17.3 0.0 0.022 14.6 0.0 2.2 2 0 0 2 2 2 1 MarR family Crp PF00325.20 BAJ51252.1 - 0.0051 16.4 0.0 0.026 14.2 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, crp family HTH_36 PF13730.6 BAJ51252.1 - 0.0072 16.3 0.0 0.034 14.1 0.0 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 BAJ51252.1 - 0.0096 15.8 0.0 0.03 14.2 0.0 1.8 1 0 0 1 1 1 1 MarR family Penicillinase_R PF03965.16 BAJ51252.1 - 0.014 15.7 0.2 0.69 10.3 0.0 2.4 2 0 0 2 2 2 0 Penicillinase repressor HTH_5 PF01022.20 BAJ51252.1 - 0.018 14.9 0.3 0.49 10.3 0.0 2.9 3 0 0 3 3 3 0 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 BAJ51252.1 - 0.023 14.3 0.1 0.25 10.9 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF3600 PF12207.8 BAJ51252.1 - 0.023 14.6 2.6 0.54 10.2 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3600) Apolipoprotein PF01442.18 BAJ51252.1 - 0.038 13.9 3.7 0.039 13.8 0.8 2.1 2 1 1 3 3 3 0 Apolipoprotein A1/A4/E domain Phage_GP20 PF06810.11 BAJ51252.1 - 0.043 13.6 0.2 0.083 12.7 0.2 1.4 1 0 0 1 1 1 0 Phage minor structural protein GP20 PfUIS3 PF11567.8 BAJ51252.1 - 0.081 13.3 0.2 0.19 12.1 0.1 1.6 2 0 0 2 2 1 0 Plasmodium falciparum UIS3 membrane protein SWI-SNF_Ssr4 PF08549.10 BAJ51252.1 - 0.095 11.3 0.3 0.14 10.8 0.3 1.2 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) rve_3 PF13683.6 BAJ51252.1 - 0.14 11.9 0.1 0.38 10.6 0.1 1.7 1 0 0 1 1 1 0 Integrase core domain AAA PF00004.29 BAJ51253.1 - 3.7e-39 134.2 0.0 4.8e-37 127.3 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MIT PF04212.18 BAJ51253.1 - 4.8e-11 42.6 1.7 1.6e-10 40.9 1.7 1.9 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_lid_3 PF17862.1 BAJ51253.1 - 1.5e-09 37.5 0.0 3.5e-09 36.3 0.0 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 BAJ51253.1 - 2.4e-07 31.0 0.0 6.5e-07 29.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 BAJ51253.1 - 5.5e-07 29.9 0.1 9.7e-05 22.7 0.0 2.9 3 1 0 3 3 2 1 AAA domain AAA_5 PF07728.14 BAJ51253.1 - 7.2e-07 29.3 0.0 2.4e-06 27.6 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Vps4_C PF09336.10 BAJ51253.1 - 3.1e-06 27.1 0.4 0.00011 22.1 0.0 2.5 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_16 PF13191.6 BAJ51253.1 - 6.3e-06 26.7 0.0 0.0023 18.3 0.0 2.7 2 1 1 3 3 2 1 AAA ATPase domain RuvB_N PF05496.12 BAJ51253.1 - 3.5e-05 23.6 0.0 9.3e-05 22.2 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 BAJ51253.1 - 8.7e-05 22.6 0.0 0.00032 20.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 BAJ51253.1 - 0.00093 18.5 0.6 0.005 16.1 0.0 2.3 2 1 1 3 3 3 1 TIP49 P-loop domain RNA_helicase PF00910.22 BAJ51253.1 - 0.0021 18.4 0.0 0.018 15.4 0.0 2.6 3 1 0 3 3 2 1 RNA helicase AAA_33 PF13671.6 BAJ51253.1 - 0.0025 18.0 0.0 0.0056 16.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 BAJ51253.1 - 0.0027 17.3 0.0 0.0099 15.4 0.0 1.8 1 1 0 1 1 1 1 P-loop containing dynein motor region AAA_25 PF13481.6 BAJ51253.1 - 0.0035 16.9 0.1 0.011 15.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 BAJ51253.1 - 0.0052 17.3 0.0 0.17 12.4 0.0 2.3 2 0 0 2 2 2 1 ABC transporter Mg_chelatase PF01078.21 BAJ51253.1 - 0.0069 15.8 0.0 0.018 14.4 0.0 1.7 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI ATPase_2 PF01637.18 BAJ51253.1 - 0.0073 16.3 0.0 1.2 9.0 0.0 2.9 2 1 1 3 3 3 1 ATPase domain predominantly from Archaea ATPase PF06745.13 BAJ51253.1 - 0.0086 15.4 0.0 2.1 7.6 0.0 2.5 1 1 1 2 2 2 1 KaiC IstB_IS21 PF01695.17 BAJ51253.1 - 0.0087 15.8 0.0 0.017 14.8 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.6 BAJ51253.1 - 0.011 16.0 0.0 0.036 14.3 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 BAJ51253.1 - 0.015 15.8 0.0 0.055 14.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 BAJ51253.1 - 0.033 13.9 0.0 0.06 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 BAJ51253.1 - 0.058 13.8 0.0 0.19 12.2 0.0 2.0 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 BAJ51253.1 - 0.064 12.9 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain KAP_NTPase PF07693.14 BAJ51253.1 - 0.066 12.4 0.0 0.21 10.8 0.0 1.6 1 1 1 2 2 2 0 KAP family P-loop domain PhoH PF02562.16 BAJ51253.1 - 0.07 12.6 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein TPR_8 PF13181.6 BAJ51253.1 - 0.071 13.4 0.5 1.4 9.3 0.0 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat ResIII PF04851.15 BAJ51253.1 - 0.081 12.9 0.0 0.29 11.1 0.0 1.8 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit NACHT PF05729.12 BAJ51253.1 - 0.092 12.7 0.0 0.21 11.5 0.0 1.6 1 1 0 1 1 1 0 NACHT domain Zeta_toxin PF06414.12 BAJ51253.1 - 0.11 11.8 0.0 0.3 10.3 0.0 1.7 1 0 0 1 1 1 0 Zeta toxin Lipase_GDSL_3 PF14606.6 BAJ51253.1 - 0.11 12.6 0.0 0.31 11.1 0.0 1.7 2 0 0 2 2 1 0 GDSL-like Lipase/Acylhydrolase family TPR_2 PF07719.17 BAJ51253.1 - 0.12 12.6 0.5 0.71 10.1 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat SMC_N PF02463.19 BAJ51254.1 - 1.4e-36 126.0 0.0 1.7e-36 125.7 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAJ51254.1 - 5.2e-18 66.3 0.1 5.2e-18 66.3 0.1 2.2 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.6 BAJ51254.1 - 2.1e-12 47.4 0.1 5.3e-11 42.8 0.1 2.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 BAJ51254.1 - 3.6e-11 43.4 2.6 8.1e-06 25.9 0.0 2.8 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 BAJ51254.1 - 0.00035 20.2 0.0 0.0017 18.0 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_tran PF00005.27 BAJ51254.1 - 0.0012 19.4 2.5 0.014 16.0 2.5 3.0 1 1 0 1 1 1 1 ABC transporter AAA_27 PF13514.6 BAJ51254.1 - 0.0036 16.9 0.0 0.0036 16.9 0.0 3.2 4 1 0 4 4 4 1 AAA domain Jnk-SapK_ap_N PF09744.9 BAJ51254.1 - 0.022 15.0 23.7 0.022 15.0 3.4 2.4 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Med4 PF10018.9 BAJ51254.1 - 0.089 12.5 2.2 1.2 8.8 0.3 2.7 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF948 PF06103.11 BAJ51254.1 - 0.1 12.9 0.1 5.6 7.3 0.0 3.4 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) RsgA_GTPase PF03193.16 BAJ51254.1 - 0.13 12.2 0.0 0.89 9.4 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase MctB PF11382.8 BAJ51254.1 - 0.28 10.9 1.8 2.2 7.9 0.2 2.4 1 1 0 2 2 2 0 Copper transport outer membrane protein, MctB ApoO PF09769.9 BAJ51254.1 - 0.34 10.9 2.6 0.85 9.6 0.2 2.4 2 0 0 2 2 2 0 Apolipoprotein O Di19_C PF14571.6 BAJ51254.1 - 0.43 11.1 3.1 0.45 11.1 0.2 2.4 2 0 0 2 2 2 0 Stress-induced protein Di19, C-terminal DUF87 PF01935.17 BAJ51254.1 - 0.69 10.0 4.6 1.2 9.2 2.0 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain Flu_NS2 PF00601.19 BAJ51254.1 - 0.83 10.0 5.2 0.4 11.0 1.9 2.2 2 1 0 2 2 1 0 Influenza non-structural protein (NS2) Rx_N PF18052.1 BAJ51254.1 - 5 7.5 8.2 4.8 7.5 0.7 2.9 2 1 1 3 3 2 0 Rx N-terminal domain AAA_13 PF13166.6 BAJ51254.1 - 5.6 5.5 13.9 6.1 5.4 0.0 2.8 2 1 1 3 3 3 0 AAA domain Spc7 PF08317.11 BAJ51254.1 - 7.9 5.3 20.0 3.7 6.4 9.5 2.7 1 1 1 3 3 3 0 Spc7 kinetochore protein FlaC_arch PF05377.11 BAJ51254.1 - 8.7 6.8 7.1 4.9 7.6 1.0 3.2 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) CHAD PF05235.14 BAJ51255.1 - 0.041 13.8 1.8 0.98 9.3 0.2 2.0 1 1 1 2 2 2 0 CHAD domain SMC_Nse1 PF07574.13 BAJ51256.1 - 0.022 14.6 0.0 0.47 10.3 0.0 2.1 1 1 1 2 2 2 0 Nse1 non-SMC component of SMC5-6 complex DEAD PF00270.29 BAJ51257.1 - 8.8e-30 103.8 0.0 2.5e-29 102.3 0.0 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase DEAD_assoc PF08494.11 BAJ51257.1 - 3.3e-26 92.2 0.5 3.3e-26 92.2 0.5 3.6 5 0 0 5 5 5 1 DEAD/H associated Helicase_C PF00271.31 BAJ51257.1 - 1.2e-15 57.8 0.1 1.1e-13 51.5 0.0 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAJ51257.1 - 5.8e-10 39.4 0.0 3.4e-09 36.9 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 BAJ51257.1 - 0.036 14.4 0.0 0.14 12.5 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 BAJ51257.1 - 0.038 14.3 2.0 0.69 10.2 0.5 3.3 3 1 0 3 3 3 0 AAA domain MciZ PF13072.6 BAJ51257.1 - 0.075 12.9 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 Mother cell inhibitor of FtsZ AAA_11 PF13086.6 BAJ51257.1 - 0.078 12.8 0.0 0.34 10.7 0.0 2.0 1 1 1 2 2 2 0 AAA domain UvrD-helicase PF00580.21 BAJ51257.1 - 0.14 11.7 0.0 0.35 10.4 0.0 1.6 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain zinc_ribbon_15 PF17032.5 BAJ51258.1 - 8.7e-05 23.2 0.3 0.00012 22.8 0.3 1.2 1 0 0 1 1 1 1 zinc-ribbon family DZR PF12773.7 BAJ51258.1 - 0.0002 21.3 0.5 0.00033 20.6 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 BAJ51258.1 - 0.0019 17.8 0.9 0.0032 17.1 0.9 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-C4H2 PF10146.9 BAJ51258.1 - 0.0085 16.4 0.2 0.01 16.2 0.2 1.1 1 0 0 1 1 1 1 Zinc finger-containing protein zf-ribbon_3 PF13248.6 BAJ51258.1 - 0.021 14.2 0.7 0.039 13.4 0.7 1.5 1 0 0 1 1 1 0 zinc-ribbon domain NOB1_Zn_bind PF08772.11 BAJ51258.1 - 0.024 14.8 0.5 0.038 14.1 0.5 1.2 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like UPF0547 PF10571.9 BAJ51258.1 - 0.073 13.2 3.1 0.12 12.4 3.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 zf-NADH-PPase PF09297.11 BAJ51258.1 - 0.13 12.0 0.1 0.32 10.7 0.1 1.6 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain DNA_ligase_ZBD PF03119.16 BAJ51258.1 - 0.13 12.3 0.2 0.25 11.4 0.2 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Gpr1_Fun34_YaaH PF01184.19 BAJ51258.1 - 0.22 11.1 5.8 0.034 13.7 2.0 1.5 2 0 0 2 2 2 0 GPR1/FUN34/yaaH family Nudix_N_2 PF14803.6 BAJ51258.1 - 0.24 11.4 0.1 0.24 11.4 0.1 1.8 2 0 0 2 2 2 0 Nudix N-terminal DUF3995 PF13160.6 BAJ51258.1 - 2.9 8.3 11.3 0.89 9.9 6.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3995) Acyl-CoA_dh_1 PF00441.24 BAJ51259.1 - 6.1e-44 149.8 3.8 8.2e-44 149.4 3.8 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 BAJ51259.1 - 1.3e-32 112.8 0.0 2.8e-32 111.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 BAJ51259.1 - 3.5e-27 94.4 0.0 7.2e-27 93.4 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 BAJ51259.1 - 1e-18 67.9 1.5 1.5e-18 67.4 1.5 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Clc-like PF07062.12 BAJ51260.1 - 0.22 10.9 2.3 0.3 10.5 2.3 1.2 1 0 0 1 1 1 0 Clc-like DUF4405 PF14358.6 BAJ51260.1 - 3.2 8.3 11.6 0.78 10.3 1.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) Cpn60_TCP1 PF00118.24 BAJ51261.1 - 2.4e-173 577.3 16.0 2.8e-173 577.1 16.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family CBFD_NFYB_HMF PF00808.23 BAJ51262.1 - 4.2e-15 55.8 0.9 4.9e-15 55.6 0.9 1.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 BAJ51262.1 - 1e-07 32.4 0.2 1.1e-07 32.2 0.2 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 AAA_lid_2 PF17863.1 BAJ51262.1 - 0.00046 20.0 0.9 0.0032 17.3 0.1 2.0 2 0 0 2 2 2 1 AAA lid domain CENP-T_C PF15511.6 BAJ51262.1 - 0.00067 19.7 0.1 0.00077 19.6 0.1 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TFIID-31kDa PF02291.15 BAJ51262.1 - 0.019 15.0 0.0 0.022 14.8 0.0 1.0 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Ribosomal_L12 PF00542.19 BAJ51262.1 - 0.064 13.6 1.5 0.32 11.4 0.2 2.3 1 1 1 2 2 2 0 Ribosomal protein L7/L12 C-terminal domain TAF PF02969.17 BAJ51262.1 - 0.067 13.4 0.6 0.082 13.1 0.6 1.2 1 0 0 1 1 1 0 TATA box binding protein associated factor (TAF) CdvA PF18822.1 BAJ51263.1 - 1.5e-07 31.3 19.1 2.1e-06 27.6 1.7 3.3 2 1 1 4 4 4 2 CdvA-like coiled-coil domain FTA4 PF13093.6 BAJ51263.1 - 0.0022 17.9 4.2 0.0022 17.9 4.2 2.6 2 1 0 2 2 2 1 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 PI3K_P85_iSH2 PF16454.5 BAJ51263.1 - 0.0034 17.0 1.6 0.0034 17.0 1.6 2.7 1 1 1 2 2 2 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Phasin PF05597.11 BAJ51263.1 - 0.009 16.0 3.1 1.6 8.7 0.4 2.6 2 0 0 2 2 2 2 Poly(hydroxyalcanoate) granule associated protein (phasin) DZR PF12773.7 BAJ51263.1 - 0.018 15.1 0.5 0.031 14.3 0.5 1.3 1 0 0 1 1 1 0 Double zinc ribbon Phi-29_GP3 PF05435.11 BAJ51263.1 - 0.025 14.0 1.6 0.044 13.3 1.5 1.5 1 1 0 1 1 1 0 Phi-29 DNA terminal protein GP3 Baculo_PEP_C PF04513.12 BAJ51263.1 - 0.026 14.5 0.1 3.8 7.5 0.1 2.2 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DHR10 PF18595.1 BAJ51263.1 - 0.077 13.1 17.1 0.15 12.1 11.4 2.7 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain zf-C6H2 PF15801.5 BAJ51263.1 - 0.08 13.3 0.9 0.13 12.6 0.9 1.4 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding DUF1664 PF07889.12 BAJ51263.1 - 0.081 13.0 3.9 0.49 10.4 1.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Sec34 PF04136.15 BAJ51263.1 - 0.1 12.5 4.8 0.58 10.0 2.7 2.3 2 0 0 2 2 2 0 Sec34-like family Ribosomal_L32p PF01783.23 BAJ51263.1 - 0.11 12.8 0.6 0.21 11.8 0.6 1.5 1 0 0 1 1 1 0 Ribosomal L32p protein family zf-Dof PF02701.15 BAJ51263.1 - 0.12 12.5 0.3 0.2 11.8 0.3 1.3 1 0 0 1 1 1 0 Dof domain, zinc finger DUF3484 PF11983.8 BAJ51263.1 - 0.13 13.4 2.0 0.36 12.0 2.0 1.8 1 0 0 1 1 1 0 Membrane-attachment and polymerisation-promoting switch DUF3131 PF11329.8 BAJ51263.1 - 0.14 11.2 0.2 2.5 7.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3131) FapA PF03961.13 BAJ51263.1 - 0.67 8.5 11.3 1.8 7.1 0.4 2.1 1 1 1 2 2 2 0 Flagellar Assembly Protein A GvpG PF05120.12 BAJ51263.1 - 0.73 9.9 7.3 8.7 6.4 2.6 3.0 2 1 0 2 2 2 0 Gas vesicle protein G DUF5595 PF18077.1 BAJ51263.1 - 0.89 9.7 10.8 2.8 8.1 1.2 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF5595) SHOCT PF09851.9 BAJ51263.1 - 1.3 8.9 10.1 2.4 8.0 4.8 3.5 3 0 0 3 3 3 0 Short C-terminal domain DUF1003 PF06210.11 BAJ51263.1 - 1.3 9.1 6.0 0.36 10.9 0.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1003) Prefoldin PF02996.17 BAJ51263.1 - 2.8 7.9 10.2 18 5.3 0.3 3.6 3 1 0 3 3 3 0 Prefoldin subunit zinc_ribbon_2 PF13240.6 BAJ51263.1 - 3 7.7 7.6 32 4.4 7.6 2.2 1 1 0 1 1 1 0 zinc-ribbon domain Spectrin PF00435.21 BAJ51263.1 - 4.9 7.7 14.4 5.1 7.6 2.7 3.4 3 1 0 3 3 3 0 Spectrin repeat IFT57 PF10498.9 BAJ51263.1 - 5.9 5.7 14.1 1.9 7.3 3.3 2.5 3 0 0 3 3 3 0 Intra-flagellar transport protein 57 TMPIT PF07851.13 BAJ51263.1 - 7.8 5.6 8.5 3.6 6.7 0.1 2.2 2 0 0 2 2 2 0 TMPIT-like protein FlaC_arch PF05377.11 BAJ51263.1 - 8.1 6.9 10.2 15 6.1 0.5 3.9 5 0 0 5 5 5 0 Flagella accessory protein C (FlaC) AAA_17 PF13207.6 BAJ51264.1 - 1.2e-33 116.4 0.0 1.8e-33 115.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 BAJ51264.1 - 1.2e-08 35.5 0.0 2.4e-08 34.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 BAJ51264.1 - 3.9e-05 23.9 0.0 0.00011 22.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 BAJ51264.1 - 0.00053 19.5 0.0 0.00059 19.4 0.0 1.1 1 0 0 1 1 1 1 Chromatin associated protein KTI12 NTPase_1 PF03266.15 BAJ51264.1 - 0.0013 18.7 0.2 0.0027 17.7 0.2 1.5 1 0 0 1 1 1 1 NTPase AAA PF00004.29 BAJ51264.1 - 0.0057 17.1 0.5 0.021 15.2 0.5 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 BAJ51264.1 - 0.006 16.9 0.3 0.013 15.8 0.1 1.7 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 BAJ51264.1 - 0.0068 16.1 0.1 1.3 8.6 0.0 2.3 2 0 0 2 2 2 1 Thymidylate kinase AAA_28 PF13521.6 BAJ51264.1 - 0.009 16.3 0.0 0.015 15.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain DUF134 PF02001.16 BAJ51264.1 - 0.009 16.6 0.2 0.071 13.7 0.0 2.3 2 1 1 3 3 2 1 Protein of unknown function DUF134 ADK PF00406.22 BAJ51264.1 - 0.016 15.3 0.1 0.71 10.0 0.0 2.3 2 0 0 2 2 2 0 Adenylate kinase AAA_22 PF13401.6 BAJ51264.1 - 0.018 15.3 0.2 0.044 14.1 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 BAJ51264.1 - 0.028 14.1 0.0 0.046 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 BAJ51264.1 - 0.029 14.1 0.0 0.041 13.6 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NB-ARC PF00931.22 BAJ51264.1 - 0.036 13.3 0.1 0.076 12.2 0.0 1.6 2 0 0 2 2 2 0 NB-ARC domain Zeta_toxin PF06414.12 BAJ51264.1 - 0.067 12.5 0.2 0.21 10.8 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin cobW PF02492.19 BAJ51264.1 - 0.11 12.0 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain dNK PF01712.19 BAJ51264.1 - 0.18 11.6 0.5 1 9.2 0.5 2.1 1 1 0 1 1 1 0 Deoxynucleoside kinase AAA_30 PF13604.6 BAJ51264.1 - 0.45 10.2 4.0 0.16 11.7 0.7 2.1 2 1 0 2 2 2 0 AAA domain GCD14 PF08704.10 BAJ51265.1 - 8.2e-36 123.9 0.0 8.7e-35 120.6 0.0 1.9 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 BAJ51265.1 - 7e-09 35.7 0.0 9.6e-09 35.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain GCD14_N PF14801.6 BAJ51265.1 - 2.1e-06 27.4 0.0 4.6e-06 26.4 0.0 1.6 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit N-term Methyltransf_25 PF13649.6 BAJ51265.1 - 2.8e-05 24.7 0.0 4.9e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 BAJ51265.1 - 4.5e-05 23.3 0.0 6.3e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_24 PF13578.6 BAJ51265.1 - 0.00043 21.3 0.0 0.00088 20.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 BAJ51265.1 - 0.00063 19.7 0.0 0.0009 19.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 BAJ51265.1 - 0.00096 19.8 0.0 0.0022 18.6 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 BAJ51265.1 - 0.0016 18.0 0.0 0.0024 17.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 BAJ51265.1 - 0.0031 17.5 0.0 0.004 17.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 BAJ51265.1 - 0.037 13.3 0.0 0.058 12.7 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Peptidase_M10 PF00413.24 BAJ51266.1 - 8e-07 29.0 0.0 4.6e-06 26.6 0.0 2.1 2 0 0 2 2 2 1 Matrixin Reprolysin_4 PF13583.6 BAJ51266.1 - 0.00057 19.6 0.0 0.001 18.7 0.0 1.4 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_2 PF13574.6 BAJ51266.1 - 0.0084 16.0 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.8 BAJ51266.1 - 0.014 15.0 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Zn_peptidase_2 PF04298.12 BAJ51266.1 - 0.021 14.3 0.1 0.037 13.4 0.1 1.3 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase Reprolysin_3 PF13582.6 BAJ51266.1 - 0.037 14.5 0.0 0.073 13.6 0.0 1.5 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.6 BAJ51266.1 - 0.046 13.9 0.0 0.078 13.1 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12 Chorismate_synt PF01264.21 BAJ51267.1 - 6.1e-140 465.6 0.0 6.9e-140 465.4 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase Plug PF07715.15 BAJ51267.1 - 0.08 13.5 0.5 0.28 11.8 0.1 2.1 3 0 0 3 3 3 0 TonB-dependent Receptor Plug Domain Nfu_N PF08712.11 BAJ51267.1 - 0.19 11.8 0.0 0.39 10.8 0.0 1.5 1 0 0 1 1 1 0 Scaffold protein Nfu/NifU N terminal Pterin_4a PF01329.19 BAJ51268.1 - 1.1e-28 99.3 0.0 1.2e-28 99.1 0.0 1.0 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase PhoU PF01895.19 BAJ51269.1 - 3.1e-24 85.2 9.4 1.4e-20 73.5 1.9 2.3 2 0 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 BAJ51269.1 - 0.00019 21.3 0.1 0.00039 20.3 0.1 1.5 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin DUF2682 PF10909.8 BAJ51269.1 - 0.0036 17.8 0.4 0.01 16.3 0.4 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2682) IGPD PF00475.18 BAJ51269.1 - 0.036 14.4 0.1 8.6 6.7 0.0 2.4 1 1 1 2 2 2 0 Imidazoleglycerol-phosphate dehydratase BLOC1_2 PF10046.9 BAJ51269.1 - 0.05 13.9 0.8 0.34 11.3 0.0 2.4 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF2080 PF09853.9 BAJ51269.1 - 0.082 12.7 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 Putative transposon-encoded protein (DUF2080) DUF86 PF01934.17 BAJ51269.1 - 0.53 10.2 3.8 72 3.3 0.0 4.4 3 1 1 4 4 4 0 Protein of unknown function DUF86 PBP_like_2 PF12849.7 BAJ51270.1 - 1.7e-28 100.1 0.0 3.3e-28 99.2 0.0 1.5 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 BAJ51270.1 - 3e-25 88.5 0.1 3.8e-24 84.9 0.0 2.2 2 1 0 2 2 2 1 PBP superfamily domain Peptidase_A4 PF01828.17 BAJ51270.1 - 0.0021 17.6 2.6 0.0033 16.9 2.6 1.2 1 0 0 1 1 1 1 Peptidase A4 family BPD_transp_1 PF00528.22 BAJ51271.1 - 1.5e-19 70.5 19.2 1.5e-19 70.5 19.2 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Deltameth_res PF16020.5 BAJ51271.1 - 1.1 9.2 4.3 2.8 7.9 0.3 3.3 2 1 0 2 2 2 0 Deltamethrin resistance BPD_transp_1 PF00528.22 BAJ51272.1 - 2.3e-20 73.1 15.3 3.1e-20 72.7 15.3 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 BAJ51273.1 - 5.8e-32 111.1 0.0 8.4e-32 110.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51273.1 - 8.9e-15 55.3 0.0 1.9e-07 31.2 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ51273.1 - 1e-10 41.4 0.7 8.2e-05 22.1 0.2 2.7 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAJ51273.1 - 3.3e-06 27.4 0.0 8.5e-06 26.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 BAJ51273.1 - 4.2e-06 26.7 0.2 0.00057 19.7 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 BAJ51273.1 - 5e-06 27.2 0.1 1.2e-05 26.0 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 BAJ51273.1 - 1.2e-05 25.8 0.1 4e-05 24.1 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 BAJ51273.1 - 0.00011 22.2 0.0 0.00034 20.6 0.0 1.8 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 BAJ51273.1 - 0.00018 21.2 0.0 0.00043 20.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATPase_2 PF01637.18 BAJ51273.1 - 0.00041 20.3 0.3 0.00091 19.2 0.1 1.8 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea Rad17 PF03215.15 BAJ51273.1 - 0.0014 18.6 0.1 0.0049 16.8 0.0 1.7 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_30 PF13604.6 BAJ51273.1 - 0.004 16.9 0.1 0.36 10.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 BAJ51273.1 - 0.01 15.6 0.1 4 7.1 0.1 2.3 2 1 0 2 2 2 0 IstB-like ATP binding protein Adeno_IVa2 PF02456.15 BAJ51273.1 - 0.012 14.4 0.1 0.085 11.6 0.0 2.1 2 0 0 2 2 2 0 Adenovirus IVa2 protein NB-ARC PF00931.22 BAJ51273.1 - 0.047 12.9 0.1 0.066 12.4 0.1 1.5 1 1 0 1 1 1 0 NB-ARC domain TniB PF05621.11 BAJ51273.1 - 0.06 12.8 0.1 4 6.8 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein CobA_CobO_BtuR PF02572.15 BAJ51273.1 - 0.066 13.5 0.1 0.1 12.9 0.1 1.3 1 0 0 1 1 1 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AAA PF00004.29 BAJ51273.1 - 0.071 13.5 0.1 0.48 10.9 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 BAJ51273.1 - 0.076 12.9 0.0 0.19 11.6 0.0 1.6 2 0 0 2 2 2 0 NACHT domain PduV-EutP PF10662.9 BAJ51273.1 - 0.076 12.8 0.4 2.5 7.8 0.1 2.7 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_18 PF13238.6 BAJ51273.1 - 0.095 13.2 0.0 0.25 11.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_27 PF13514.6 BAJ51273.1 - 0.1 12.1 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 BAJ51273.1 - 0.13 12.7 0.0 0.32 11.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_14 PF13173.6 BAJ51273.1 - 0.13 12.3 0.0 0.35 10.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 BAJ51273.1 - 0.13 12.3 0.0 0.54 10.4 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_28 PF13521.6 BAJ51273.1 - 0.14 12.4 0.0 0.37 11.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain Relaxase PF03432.14 BAJ51273.1 - 0.21 11.2 0.0 0.38 10.3 0.0 1.3 1 0 0 1 1 1 0 Relaxase/Mobilisation nuclease domain PhoU PF01895.19 BAJ51274.1 - 2.1e-25 89.0 0.6 1.5e-13 51.0 0.5 2.1 2 0 0 2 2 2 2 PhoU domain Pil1 PF13805.6 BAJ51274.1 - 0.015 14.8 0.1 0.025 14.1 0.1 1.5 1 1 0 1 1 1 0 Eisosome component PIL1 Mod_r PF07200.13 BAJ51274.1 - 0.034 14.2 0.7 0.12 12.4 0.3 1.9 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Prok-JAB PF14464.6 BAJ51275.1 - 2e-08 34.0 0.1 3.9e-08 33.1 0.1 1.4 1 1 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.15 BAJ51275.1 - 0.016 15.2 0.1 0.034 14.1 0.1 1.5 1 0 0 1 1 1 0 RadC-like JAB domain TIM PF00121.18 BAJ51276.1 - 1e-13 51.3 0.0 1.1e-12 47.8 0.0 1.9 1 1 1 2 2 2 1 Triosephosphate isomerase ThiG PF05690.14 BAJ51276.1 - 5.7e-08 32.4 1.5 5.7e-08 32.4 1.5 1.6 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG NMO PF03060.15 BAJ51276.1 - 2.6e-06 27.1 0.6 4.5e-06 26.3 0.6 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.21 BAJ51276.1 - 0.00033 20.2 0.4 0.00087 18.8 0.0 1.9 3 0 0 3 3 3 1 Histidine biosynthesis protein FMN_dh PF01070.18 BAJ51276.1 - 0.00043 19.4 0.2 0.00078 18.6 0.2 1.4 1 0 0 1 1 1 1 FMN-dependent dehydrogenase DUF711 PF05167.12 BAJ51276.1 - 0.015 14.2 0.3 0.091 11.6 0.1 2.2 1 1 2 3 3 3 0 Uncharacterised ACR (DUF711) IGPS PF00218.21 BAJ51276.1 - 0.023 13.9 0.0 0.035 13.3 0.0 1.4 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase B12-binding PF02310.19 BAJ51276.1 - 0.056 13.5 0.5 0.13 12.3 0.1 2.0 2 1 0 2 2 2 0 B12 binding domain IMPDH PF00478.25 BAJ51276.1 - 0.074 12.0 0.5 0.15 11.1 0.5 1.4 1 1 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain FlpD PF02662.16 BAJ51276.1 - 0.14 12.1 0.9 0.49 10.4 0.0 2.3 3 0 0 3 3 3 0 Methyl-viologen-reducing hydrogenase, delta subunit GDC-P PF02347.16 BAJ51277.1 - 9.1e-107 357.5 0.0 1.1e-106 357.3 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein Aminotran_5 PF00266.19 BAJ51277.1 - 2.7e-08 33.2 0.0 5.4e-08 32.2 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 BAJ51277.1 - 8.3e-06 24.6 0.0 1.5e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DNA_pol_A_exo1 PF01612.20 BAJ51277.1 - 0.16 11.7 0.1 1 9.0 0.0 2.1 2 0 0 2 2 2 0 3'-5' exonuclease ATP-synt_D PF01813.17 BAJ51277.1 - 0.17 11.7 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 ATP synthase subunit D GDC-P PF02347.16 BAJ51278.1 - 4.6e-15 55.4 0.0 8.5e-15 54.5 0.0 1.3 1 0 0 1 1 1 1 Glycine cleavage system P-protein Aminotran_5 PF00266.19 BAJ51278.1 - 3.7e-06 26.1 0.0 5.1e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 BAJ51278.1 - 0.00016 21.1 0.0 0.00021 20.7 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase GCV_T PF01571.21 BAJ51279.1 - 9.8e-76 254.5 0.0 1.2e-75 254.2 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 BAJ51279.1 - 9.8e-15 54.3 0.1 1.9e-14 53.3 0.1 1.5 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain tRNA_anti-codon PF01336.25 BAJ51281.1 - 2.3e-06 27.5 2.2 3.7e-06 26.8 1.6 1.7 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain ETF PF01012.21 BAJ51282.1 - 6.8e-15 55.4 0.0 2.3e-09 37.4 0.0 2.6 2 1 0 2 2 2 2 Electron transfer flavoprotein domain ETF PF01012.21 BAJ51283.1 - 2.3e-29 102.6 0.0 3.4e-29 102.0 0.0 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF_alpha PF00766.19 BAJ51283.1 - 6e-25 87.1 1.5 6.9e-25 86.9 0.4 1.7 2 0 0 2 2 2 1 Electron transfer flavoprotein FAD-binding domain DAO PF01266.24 BAJ51284.1 - 4.4e-14 52.8 1.5 1.8e-12 47.5 1.5 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 BAJ51284.1 - 5.3e-12 45.3 0.1 1.9e-06 27.0 0.0 2.2 2 0 0 2 2 2 2 Tryptophan halogenase FAD_oxidored PF12831.7 BAJ51284.1 - 9.2e-11 41.7 0.4 1.8e-10 40.8 0.4 1.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 BAJ51284.1 - 1.9e-09 37.2 2.4 3e-08 33.2 0.7 2.7 3 0 0 3 3 3 1 FAD binding domain Pyr_redox_2 PF07992.14 BAJ51284.1 - 4.2e-08 32.8 1.1 1.5e-06 27.7 0.3 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 BAJ51284.1 - 7.5e-08 31.9 1.3 1.3e-06 27.8 0.4 2.3 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 BAJ51284.1 - 8.1e-08 31.9 0.3 4.7e-07 29.4 0.3 1.9 1 1 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 BAJ51284.1 - 1.4e-07 31.6 0.3 4.2e-07 30.1 0.3 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 BAJ51284.1 - 2.7e-07 29.7 0.4 2.5e-06 26.5 0.2 2.0 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 BAJ51284.1 - 7.8e-07 28.5 0.4 2.9e-05 23.3 0.5 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 BAJ51284.1 - 6.7e-05 22.3 0.3 0.00015 21.1 0.2 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 BAJ51284.1 - 0.0011 18.1 0.4 0.0087 15.1 0.2 2.0 2 0 0 2 2 2 1 Lycopene cyclase protein Amino_oxidase PF01593.24 BAJ51284.1 - 0.056 12.7 0.1 2.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase 3HCDH_N PF02737.18 BAJ51284.1 - 0.18 11.7 0.9 0.28 11.0 0.1 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 BAJ51284.1 - 0.25 11.3 0.5 0.51 10.3 0.1 1.7 2 0 0 2 2 2 0 FAD-NAD(P)-binding Rhodanese PF00581.20 BAJ51285.1 - 4.1e-42 143.0 0.0 1.5e-20 73.7 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain GCV_H PF01597.19 BAJ51286.1 - 5.4e-12 45.7 0.0 7.9e-12 45.1 0.0 1.3 1 0 0 1 1 1 1 Glycine cleavage H-protein TusA PF01206.17 BAJ51286.1 - 1.2e-06 28.3 0.0 3e-06 26.9 0.0 1.6 1 0 0 1 1 1 1 Sulfurtransferase TusA tRNA_int_endo PF01974.17 BAJ51287.1 - 2.3e-25 88.5 0.0 5e-25 87.4 0.0 1.5 2 0 0 2 2 2 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 BAJ51287.1 - 8.1e-19 67.1 0.3 1.9e-18 65.9 0.1 1.7 2 0 0 2 2 2 1 tRNA intron endonuclease, N-terminal domain PhoU_div PF01865.16 BAJ51288.1 - 1.2e-16 60.7 12.6 1.7e-16 60.2 12.6 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.19 BAJ51288.1 - 2.3e-05 24.7 13.1 0.0021 18.5 1.8 2.6 2 1 0 2 2 2 2 PhoU domain NTP_transf_3 PF12804.7 BAJ51289.1 - 4.5e-27 95.4 0.3 5.7e-27 95.0 0.3 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain S_layer_C PF05124.12 BAJ51290.1 - 9e-08 32.4 0.0 1.4e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 S-layer like family, C-terminal region MarR_2 PF12802.7 BAJ51290.1 - 4e-05 23.4 0.0 0.00012 21.9 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 BAJ51290.1 - 0.0022 17.5 0.0 0.021 14.4 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 BAJ51290.1 - 0.01 15.8 0.0 0.024 14.7 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 BAJ51290.1 - 0.052 13.6 0.1 0.15 12.1 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn helix EF-hand_5 PF13202.6 BAJ51290.1 - 0.12 11.9 1.2 0.25 10.9 1.2 1.5 1 0 0 1 1 1 0 EF hand SIS PF01380.22 BAJ51291.1 - 7.6e-43 145.5 0.1 3.8e-21 75.3 0.2 2.7 3 0 0 3 3 3 2 SIS domain GATase_6 PF13522.6 BAJ51291.1 - 4.3e-18 65.8 0.0 7.7e-18 65.0 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 BAJ51291.1 - 1.4e-14 54.0 0.0 2.3e-14 53.4 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 BAJ51291.1 - 0.0014 17.6 0.1 0.0052 15.7 0.1 1.8 2 0 0 2 2 2 1 Glutamine amidotransferases class-II SIS_2 PF13580.6 BAJ51291.1 - 0.0089 16.0 1.0 4 7.4 0.1 3.1 2 1 1 3 3 3 2 SIS domain bact-PGI_C PF10432.9 BAJ51291.1 - 0.0094 16.0 0.1 1.3 9.0 0.0 3.1 3 1 0 3 3 3 1 Bacterial phospho-glucose isomerase C-terminal SIS domain SnoaL_2 PF12680.7 BAJ51291.1 - 0.1 13.2 0.2 0.29 11.8 0.2 1.8 1 0 0 1 1 1 0 SnoaL-like domain EVE PF01878.18 BAJ51292.1 - 0.0031 17.5 0.0 0.0036 17.3 0.0 1.1 1 0 0 1 1 1 1 EVE domain Glu_synthase PF01645.17 BAJ51293.1 - 1.1e-19 70.8 0.0 3.1e-19 69.4 0.0 1.7 1 1 0 1 1 1 1 Conserved region in glutamate synthase FMN_dh PF01070.18 BAJ51293.1 - 4.9e-18 65.3 1.7 1e-12 47.8 0.5 2.1 2 0 0 2 2 2 2 FMN-dependent dehydrogenase NMO PF03060.15 BAJ51293.1 - 1.8e-05 24.3 0.3 2.7e-05 23.7 0.3 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase tRNA-synt_2 PF00152.20 BAJ51294.1 - 2.2e-62 211.0 0.0 2.5e-62 210.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) MecA PF05389.12 BAJ51295.1 - 0.00054 19.7 0.0 0.00057 19.6 0.0 1.0 1 0 0 1 1 1 1 Negative regulator of genetic competence (MecA) Miga PF10265.9 BAJ51295.1 - 0.015 14.3 0.6 0.018 14.0 0.6 1.1 1 0 0 1 1 1 0 Mitoguardin DUF2067 PF09840.9 BAJ51295.1 - 0.05 13.2 0.9 0.19 11.3 0.2 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2067) V_ATPase_I PF01496.19 BAJ51295.1 - 0.071 11.0 3.9 0.094 10.6 3.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family T2SSF PF00482.23 BAJ51296.1 - 2.4e-06 27.5 2.6 0.016 15.2 0.1 2.9 2 0 0 2 2 2 2 Type II secretion system (T2SS), protein F T2SSE PF00437.20 BAJ51297.1 - 9.8e-48 162.6 0.0 1.5e-47 162.0 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 BAJ51297.1 - 0.0046 16.7 0.1 0.19 11.5 0.1 2.8 3 0 0 3 3 3 1 P-loop containing region of AAA domain PCMT PF01135.19 BAJ51297.1 - 0.053 13.3 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Rx_N PF18052.1 BAJ51297.1 - 0.14 12.4 0.5 1.9 8.8 0.1 2.4 2 0 0 2 2 2 0 Rx N-terminal domain DUF927 PF06048.11 BAJ51297.1 - 0.15 11.6 0.1 0.25 10.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF927) ATPase PF06745.13 BAJ51298.1 - 3.3e-18 65.9 0.0 3.9e-18 65.6 0.0 1.0 1 0 0 1 1 1 1 KaiC DUF835 PF05763.12 BAJ51298.1 - 3.6e-07 30.0 0.1 5.2e-07 29.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF835) MutS_V PF00488.21 BAJ51298.1 - 0.00025 21.1 0.1 0.21 11.6 0.0 2.1 2 0 0 2 2 2 2 MutS domain V PAXNEB PF05625.11 BAJ51298.1 - 0.007 15.5 0.2 0.008 15.3 0.2 1.1 1 0 0 1 1 1 1 PAXNEB protein AAA_14 PF13173.6 BAJ51298.1 - 0.022 14.8 0.1 1.1 9.3 0.1 2.3 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 BAJ51298.1 - 0.038 14.3 0.0 0.074 13.3 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAJ51298.1 - 0.063 13.0 0.1 0.85 9.4 0.0 2.3 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_25 PF13481.6 BAJ51298.1 - 0.13 11.9 0.0 0.24 10.9 0.0 1.7 1 1 0 1 1 1 0 AAA domain Arch_flagellin PF01917.16 BAJ51300.1 - 1.8e-06 28.2 0.0 2.3e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin Wzt_C PF14524.6 BAJ51300.1 - 0.053 13.6 0.0 0.26 11.3 0.0 2.1 1 1 1 2 2 2 0 Wzt C-terminal domain DUF1192 PF06698.11 BAJ51301.1 - 0.068 13.2 1.8 0.19 11.8 1.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) Arch_flagellin PF01917.16 BAJ51302.1 - 2.4e-25 89.6 6.2 2.7e-25 89.5 6.2 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin DUF3786 PF12654.7 BAJ51303.1 - 5.4e-23 81.5 0.0 6.8e-23 81.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3786) Cob_adeno_trans PF01923.18 BAJ51304.1 - 4.3e-40 137.5 0.0 5.3e-40 137.2 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase BPD_transp_2 PF02653.16 BAJ51305.1 - 7.9e-44 149.8 28.1 1.1e-43 149.4 28.1 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Coa1 PF08695.10 BAJ51305.1 - 0.02 14.7 0.1 0.05 13.4 0.1 1.6 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 BPD_transp_2 PF02653.16 BAJ51306.1 - 1.8e-38 132.2 33.1 2.3e-38 131.9 33.1 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF2417 PF10329.9 BAJ51306.1 - 0.49 9.8 5.5 1.1 8.7 5.5 1.5 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Peripla_BP_6 PF13458.6 BAJ51307.1 - 1.7e-32 113.4 1.2 2.4e-32 112.9 1.2 1.2 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 BAJ51307.1 - 3.6e-20 72.4 0.0 5.4e-20 71.8 0.0 1.3 1 0 0 1 1 1 1 Receptor family ligand binding region PrpR_N PF06506.11 BAJ51307.1 - 0.039 13.5 0.0 0.34 10.5 0.0 2.3 2 0 0 2 2 2 0 Propionate catabolism activator ABC_tran PF00005.27 BAJ51308.1 - 1.2e-25 90.6 0.0 1.5e-25 90.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51308.1 - 1e-06 28.8 1.8 0.0009 19.1 0.6 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 BAJ51308.1 - 9.4e-06 25.4 0.0 2e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_29 PF13555.6 BAJ51308.1 - 1.8e-05 24.4 0.1 3.6e-05 23.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 BAJ51308.1 - 0.00027 20.6 1.2 0.13 11.8 0.2 2.2 2 0 0 2 2 2 2 AAA domain AAA_23 PF13476.6 BAJ51308.1 - 0.0011 19.5 0.9 0.0017 18.9 0.4 1.5 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 BAJ51308.1 - 0.0024 17.6 0.1 0.0054 16.5 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 BAJ51308.1 - 0.0027 18.0 0.5 0.016 15.5 0.5 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 BAJ51308.1 - 0.0039 16.6 0.6 0.035 13.5 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 BAJ51308.1 - 0.004 16.9 0.1 0.027 14.2 0.2 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 BAJ51308.1 - 0.008 16.6 0.2 0.018 15.4 0.1 1.6 2 0 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 BAJ51308.1 - 0.0087 16.0 0.1 0.015 15.2 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase cobW PF02492.19 BAJ51308.1 - 0.029 13.9 0.1 0.044 13.4 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.22 BAJ51308.1 - 0.043 13.5 0.0 0.074 12.7 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain DLIC PF05783.11 BAJ51308.1 - 0.047 12.5 0.4 0.17 10.7 0.1 1.8 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) T2SSE PF00437.20 BAJ51308.1 - 0.051 12.6 0.2 0.079 12.0 0.2 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_33 PF13671.6 BAJ51308.1 - 0.053 13.7 0.1 0.074 13.2 0.1 1.6 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 BAJ51308.1 - 0.06 13.4 0.1 0.15 12.2 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 BAJ51308.1 - 0.066 12.7 0.1 0.13 11.8 0.1 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_19 PF13245.6 BAJ51308.1 - 0.07 13.5 0.1 0.17 12.2 0.1 1.5 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 BAJ51308.1 - 0.073 12.4 0.0 0.098 12.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI G-alpha PF00503.20 BAJ51308.1 - 0.075 12.2 0.0 0.075 12.2 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA PF00004.29 BAJ51308.1 - 0.078 13.4 0.1 0.19 12.2 0.1 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 BAJ51308.1 - 0.13 12.1 0.4 0.34 10.8 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA_24 PF13479.6 BAJ51308.1 - 0.14 11.8 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 BAJ51309.1 - 2e-32 112.5 0.0 3.8e-32 111.7 0.0 1.4 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.6 BAJ51309.1 - 2.5e-17 63.6 0.1 9.1e-08 32.3 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ51309.1 - 6.4e-09 35.6 0.5 7.1e-05 22.3 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 BAJ51309.1 - 5.2e-06 26.4 0.1 0.00012 22.0 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 BAJ51309.1 - 4.1e-05 24.2 0.1 8.7e-05 23.1 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 BAJ51309.1 - 0.0004 20.1 0.0 0.00097 18.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 BAJ51309.1 - 0.00093 19.5 0.0 0.0017 18.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_27 PF13514.6 BAJ51309.1 - 0.0023 17.5 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 BAJ51309.1 - 0.0057 16.4 0.1 0.014 15.1 0.1 1.8 2 1 0 2 2 2 1 AAA domain cobW PF02492.19 BAJ51309.1 - 0.0087 15.7 0.4 0.29 10.7 0.3 2.2 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 BAJ51309.1 - 0.012 16.0 0.0 0.017 15.5 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain T2SSE PF00437.20 BAJ51309.1 - 0.013 14.6 0.2 0.027 13.5 0.1 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_33 PF13671.6 BAJ51309.1 - 0.02 15.1 0.2 0.052 13.7 0.2 1.7 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 BAJ51309.1 - 0.029 14.4 0.8 0.33 11.0 0.1 2.5 2 1 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 BAJ51309.1 - 0.03 14.2 0.1 0.054 13.4 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase NACHT PF05729.12 BAJ51309.1 - 0.04 13.8 0.3 0.08 12.9 0.2 1.6 2 0 0 2 2 1 0 NACHT domain FtsK_SpoIIIE PF01580.18 BAJ51309.1 - 0.057 12.8 0.1 0.1 11.9 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Septin PF00735.18 BAJ51309.1 - 0.058 12.7 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 Septin AAA_25 PF13481.6 BAJ51309.1 - 0.069 12.7 0.0 0.22 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 BAJ51309.1 - 0.08 13.0 0.1 0.13 12.3 0.1 1.6 1 1 0 1 1 1 0 Dynamin family ABC_ATPase PF09818.9 BAJ51309.1 - 0.087 11.6 0.2 0.85 8.3 0.1 2.2 2 1 0 2 2 2 0 Predicted ATPase of the ABC class Rad17 PF03215.15 BAJ51309.1 - 0.091 12.7 0.1 0.23 11.4 0.0 1.8 2 1 0 2 2 2 0 Rad17 P-loop domain AAA_24 PF13479.6 BAJ51309.1 - 0.11 12.2 0.2 0.22 11.2 0.2 1.5 1 0 0 1 1 1 0 AAA domain CUE PF02845.16 BAJ51309.1 - 0.13 12.0 0.1 0.29 10.9 0.1 1.6 1 0 0 1 1 1 0 CUE domain ATPase_2 PF01637.18 BAJ51309.1 - 0.13 12.2 0.6 0.67 9.8 0.2 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea HAD_2 PF13419.6 BAJ51310.1 - 5.4e-12 46.1 0.0 9e-12 45.4 0.0 1.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 BAJ51310.1 - 9.2e-08 32.6 0.0 1.1e-05 25.8 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 BAJ51310.1 - 0.02 15.0 0.0 0.04 14.0 0.0 1.5 1 0 0 1 1 1 0 HAD-hyrolase-like UPF0175 PF03683.13 BAJ51310.1 - 0.15 11.8 0.0 0.39 10.5 0.0 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0175) Gp_dh_C PF02800.20 BAJ51311.1 - 2.1e-20 72.9 0.0 4e-20 72.0 0.0 1.4 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 BAJ51311.1 - 6e-11 42.5 0.6 1.4e-10 41.4 0.4 1.7 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 BAJ51311.1 - 2.4e-07 31.0 2.7 1.1e-06 28.9 0.3 2.9 3 0 0 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 BAJ51311.1 - 1.6e-05 25.7 0.1 4.1e-05 24.4 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 BAJ51311.1 - 0.00059 20.5 0.1 0.0018 18.9 0.1 1.9 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 BAJ51311.1 - 0.0007 19.9 0.0 0.0016 18.7 0.0 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 BAJ51311.1 - 0.015 14.6 2.7 0.075 12.4 0.4 2.7 2 1 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 BAJ51311.1 - 0.062 13.6 0.0 0.26 11.6 0.0 2.0 2 0 0 2 2 2 0 TrkA-N domain Semialdhyde_dh PF01118.24 BAJ51311.1 - 0.068 13.6 0.0 0.17 12.3 0.0 1.7 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain PGK PF00162.19 BAJ51312.1 - 3.7e-102 342.1 0.0 4.2e-102 341.9 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase GSDH PF07995.11 BAJ51313.1 - 8.4e-75 252.1 0.0 1.1e-74 251.7 0.0 1.1 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase Laminin_G_1 PF00054.23 BAJ51313.1 - 0.13 12.5 0.0 0.23 11.7 0.0 1.4 1 0 0 1 1 1 0 Laminin G domain bZIP_1 PF00170.21 BAJ51314.1 - 0.0044 17.1 2.2 0.0073 16.4 2.2 1.3 1 0 0 1 1 1 1 bZIP transcription factor VPS28 PF03997.12 BAJ51314.1 - 0.017 14.8 0.5 0.021 14.5 0.5 1.1 1 0 0 1 1 1 0 VPS28 protein FlaC_arch PF05377.11 BAJ51314.1 - 0.029 14.8 2.1 0.056 13.9 2.1 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) LPP PF04728.13 BAJ51314.1 - 0.14 12.5 1.3 0.29 11.6 1.0 1.6 2 0 0 2 2 2 0 Lipoprotein leucine-zipper Peptidase_M1 PF01433.20 BAJ51316.1 - 1.8e-52 178.1 0.5 4.2e-52 176.9 0.3 1.7 2 0 0 2 2 2 1 Peptidase family M1 domain HEAT_2 PF13646.6 BAJ51316.1 - 1.2e-29 102.5 4.6 8.5e-11 42.1 0.3 3.6 1 1 1 3 3 3 3 HEAT repeats Peptidase_M1_N PF17900.1 BAJ51316.1 - 2.6e-16 60.3 0.0 6.9e-16 59.0 0.0 1.7 1 1 0 1 1 1 1 Peptidase M1 N-terminal domain HEAT_PBS PF03130.16 BAJ51316.1 - 2.2e-12 46.4 2.9 0.00055 20.4 0.3 4.6 5 0 0 5 5 5 2 PBS lyase HEAT-like repeat HEAT PF02985.22 BAJ51316.1 - 1.2e-06 28.2 0.7 2.3 8.7 0.0 5.0 4 0 0 4 4 4 2 HEAT repeat Vitellogenin_N PF01347.22 BAJ51316.1 - 0.0072 14.8 1.0 0.83 8.0 0.1 2.1 1 1 1 2 2 2 2 Lipoprotein amino terminal region DUF445 PF04286.12 BAJ51316.1 - 0.01 15.7 0.9 0.093 12.5 0.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF445) CBS PF00571.28 BAJ51317.1 - 1.1e-31 109.1 7.1 1.5e-16 60.5 1.5 2.1 2 0 0 2 2 2 2 CBS domain Hydrolase_6 PF13344.6 BAJ51318.1 - 3.8e-26 91.2 0.0 1.1e-25 89.6 0.0 1.8 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 BAJ51318.1 - 3.6e-18 65.4 0.1 1.6e-17 63.3 0.0 2.1 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase PF00702.26 BAJ51318.1 - 4.9e-13 49.8 2.0 1.8e-11 44.8 2.0 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 BAJ51318.1 - 3.6e-12 46.7 0.2 1.2e-07 32.0 0.0 2.6 2 1 1 3 3 3 2 Haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 BAJ51318.1 - 4.7e-05 23.1 0.0 0.00067 19.3 0.0 2.3 2 0 0 2 2 2 1 Mitochondrial PGP phosphatase Myotub-related PF06602.14 BAJ51318.1 - 0.033 13.1 0.0 0.049 12.6 0.0 1.2 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain AsnC_trans_reg PF01037.21 BAJ51319.1 - 7.5e-19 67.5 0.0 1.6e-18 66.4 0.0 1.6 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 BAJ51319.1 - 4.6e-14 51.7 0.8 2.5e-13 49.4 0.3 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 BAJ51319.1 - 5.5e-13 48.5 0.6 1.4e-12 47.2 0.4 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain TrmB PF01978.19 BAJ51319.1 - 1.4e-07 31.3 0.0 2.3e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 BAJ51319.1 - 1.1e-06 28.3 0.0 2e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_43 PF09904.9 BAJ51319.1 - 6.8e-06 25.9 0.0 1.1e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn helix MarR_2 PF12802.7 BAJ51319.1 - 5e-05 23.1 0.0 8.2e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 MarR family Mga PF05043.13 BAJ51319.1 - 0.00015 22.2 0.1 0.00031 21.2 0.1 1.4 1 0 0 1 1 1 1 Mga helix-turn-helix domain HTH_20 PF12840.7 BAJ51319.1 - 0.00018 21.5 0.0 0.00039 20.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 BAJ51319.1 - 0.0011 18.8 0.3 0.0096 15.8 0.1 2.2 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.12 BAJ51319.1 - 0.0014 18.5 1.6 0.0015 18.5 0.3 1.8 2 0 0 2 2 2 1 HTH domain HTH_IclR PF09339.10 BAJ51319.1 - 0.0017 18.1 0.0 0.0027 17.5 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_28 PF13518.6 BAJ51319.1 - 0.0026 17.8 0.0 0.0047 17.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2250 PF10007.9 BAJ51319.1 - 0.0051 16.9 0.2 0.0092 16.1 0.2 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) DUF1690 PF07956.11 BAJ51319.1 - 0.0068 16.8 0.7 0.0087 16.5 0.7 1.2 1 0 0 1 1 1 1 Protein of Unknown function (DUF1690) HTH_23 PF13384.6 BAJ51319.1 - 0.017 14.9 0.0 0.03 14.1 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain RHH_1 PF01402.21 BAJ51319.1 - 0.021 14.8 0.5 0.056 13.4 0.5 1.8 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family DUF4423 PF14394.6 BAJ51319.1 - 0.026 14.2 0.2 0.037 13.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_30 PF13556.6 BAJ51319.1 - 0.035 13.9 0.0 0.057 13.2 0.0 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Rrf2 PF02082.20 BAJ51319.1 - 0.037 14.4 0.4 0.092 13.1 0.1 1.7 2 0 0 2 2 2 0 Transcriptional regulator HTH_36 PF13730.6 BAJ51319.1 - 0.048 13.6 0.1 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Spore_YhcN_YlaJ PF09580.10 BAJ51319.1 - 0.049 13.7 0.0 0.092 12.8 0.0 1.5 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) Sigma70_r4 PF04545.16 BAJ51319.1 - 0.079 12.5 0.2 0.16 11.5 0.2 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 Stk19 PF10494.9 BAJ51319.1 - 0.08 12.6 0.2 0.095 12.4 0.2 1.2 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 GntR PF00392.21 BAJ51319.1 - 0.095 12.4 0.1 0.22 11.2 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_9 PF08221.11 BAJ51319.1 - 0.1 12.7 0.1 0.26 11.4 0.1 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_Crp_2 PF13545.6 BAJ51319.1 - 0.14 12.2 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain RuvB_C PF05491.13 BAJ51319.1 - 0.15 11.9 0.2 0.36 10.7 0.1 1.6 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain ACP_syn_III_C PF08541.10 BAJ51320.1 - 3.4e-14 52.8 0.0 7.9e-14 51.6 0.0 1.7 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Thiolase_N PF00108.23 BAJ51320.1 - 1.4e-06 27.9 0.5 2.1e-06 27.3 0.5 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain HMG_CoA_synt_C PF08540.10 BAJ51320.1 - 1.1e-05 25.2 1.7 0.0066 16.1 0.0 2.5 2 1 1 3 3 3 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal ACP_syn_III PF08545.10 BAJ51320.1 - 0.00053 19.8 0.5 0.0014 18.4 0.5 1.7 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_C PF02803.18 BAJ51320.1 - 0.002 17.7 0.1 0.03 14.0 0.0 2.3 2 0 0 2 2 2 1 Thiolase, C-terminal domain Thiolase_N PF00108.23 BAJ51321.1 - 1.7e-14 53.8 4.2 3.8e-14 52.7 4.2 1.6 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 BAJ51321.1 - 2.2e-07 30.6 0.9 6.2e-06 25.9 0.0 2.6 3 0 0 3 3 3 1 Thiolase, C-terminal domain ACP_syn_III PF08545.10 BAJ51321.1 - 0.00012 21.9 7.6 0.00038 20.3 0.3 2.9 3 0 0 3 3 3 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ketoacyl-synt PF00109.26 BAJ51321.1 - 0.03 13.9 4.2 0.035 13.7 2.9 1.8 2 0 0 2 2 2 0 Beta-ketoacyl synthase, N-terminal domain OB_aCoA_assoc PF01796.17 BAJ51322.1 - 4.2e-17 61.9 0.5 6.4e-17 61.3 0.5 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 BAJ51322.1 - 5.9e-05 22.8 2.8 0.00012 21.9 2.8 1.5 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DZR PF12773.7 BAJ51322.1 - 0.0018 18.3 0.2 0.0029 17.6 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon Zn-ribbon_8 PF09723.10 BAJ51322.1 - 0.0026 17.8 1.7 0.0063 16.6 1.7 1.6 1 0 0 1 1 1 1 Zinc ribbon domain TackOD1 PF18551.1 BAJ51322.1 - 0.027 14.2 0.1 0.037 13.7 0.1 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 TF_Zn_Ribbon PF08271.12 BAJ51322.1 - 0.069 12.7 0.3 1.7 8.2 0.0 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding UPF0547 PF10571.9 BAJ51322.1 - 0.18 11.9 2.1 0.35 11.0 2.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 HypA PF01155.19 BAJ51322.1 - 0.28 11.2 1.3 0.47 10.5 0.6 1.6 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 BAJ51322.1 - 0.35 10.3 3.4 0.81 9.2 3.4 1.6 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 BAJ51322.1 - 0.8 9.5 4.4 1.8 8.4 4.4 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.6 BAJ51322.1 - 2.2 8.3 7.1 5.8 6.9 1.0 2.5 1 1 1 2 2 2 0 Nudix N-terminal DNA_RNApol_7kD PF03604.13 BAJ51322.1 - 3.3 7.5 9.2 12 5.7 0.7 2.0 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit YhfH PF14149.6 BAJ51322.1 - 3.6 7.7 5.6 5.9 7.0 0.3 2.3 1 1 1 2 2 2 0 YhfH-like protein ATP-synt_D PF01813.17 BAJ51323.1 - 0.00093 19.1 7.2 0.0084 16.0 6.1 2.2 2 0 0 2 2 2 1 ATP synthase subunit D NPV_P10 PF05531.12 BAJ51323.1 - 0.014 15.9 0.5 0.11 13.0 0.1 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Fmp27_WPPW PF10359.9 BAJ51323.1 - 0.016 14.0 1.5 0.021 13.7 1.2 1.4 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Fib_alpha PF08702.10 BAJ51323.1 - 0.02 15.1 1.4 0.15 12.3 0.1 2.3 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 BAJ51323.1 - 0.029 14.4 1.4 0.29 11.2 0.5 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Med9 PF07544.13 BAJ51323.1 - 0.054 13.6 4.5 0.085 13.0 0.8 2.8 2 1 1 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 THOC7 PF05615.13 BAJ51323.1 - 0.087 13.1 7.6 0.1 12.9 4.8 2.4 2 1 0 2 2 2 0 Tho complex subunit 7 STAT_alpha PF01017.20 BAJ51323.1 - 0.12 12.2 3.2 3.4 7.5 0.3 2.4 2 1 0 2 2 2 0 STAT protein, all-alpha domain Syntaxin-6_N PF09177.11 BAJ51323.1 - 0.15 12.6 2.1 0.89 10.2 1.9 2.5 1 1 0 1 1 1 0 Syntaxin 6, N-terminal T6SS_VipA PF05591.12 BAJ51323.1 - 0.21 11.4 6.0 0.07 12.9 1.9 2.0 2 0 0 2 2 2 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 HAUS-augmin3 PF14932.6 BAJ51323.1 - 0.31 10.6 6.7 0.48 10.0 5.8 1.8 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 Cep57_CLD_2 PF14197.6 BAJ51323.1 - 0.35 11.0 8.3 3.9 7.6 0.4 3.5 3 0 0 3 3 3 0 Centrosome localisation domain of PPC89 FlgN PF05130.12 BAJ51323.1 - 0.42 11.1 11.9 0.095 13.2 6.6 2.2 2 1 1 3 3 3 0 FlgN protein FTA4 PF13093.6 BAJ51323.1 - 0.75 9.6 11.0 37 4.1 11.0 2.8 1 1 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 FapA PF03961.13 BAJ51323.1 - 0.99 7.9 11.4 0.67 8.5 3.0 2.1 1 1 0 2 2 2 0 Flagellar Assembly Protein A CENP-Q PF13094.6 BAJ51323.1 - 1 9.5 10.7 0.27 11.4 3.8 2.3 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Occludin_ELL PF07303.13 BAJ51323.1 - 1.3 9.8 4.7 2.8 8.7 0.6 3.0 2 2 0 2 2 2 0 Occludin homology domain Cortex-I_coil PF09304.10 BAJ51323.1 - 1.7 8.9 13.9 0.036 14.3 2.7 2.8 2 1 1 3 3 3 0 Cortexillin I, coiled coil kleA_kleC PF17383.2 BAJ51323.1 - 2 8.8 6.1 19 5.7 0.1 3.2 3 1 0 3 3 3 0 Uncharacterized KorC regulated protein A Atg14 PF10186.9 BAJ51323.1 - 3.4 6.7 6.4 4.8 6.2 6.4 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlaC_arch PF05377.11 BAJ51323.1 - 3.4 8.1 9.2 0.23 11.9 0.7 3.2 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) JAB PF01398.21 BAJ51324.1 - 1.8e-22 79.5 0.0 2.6e-22 79.0 0.0 1.3 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 BAJ51324.1 - 4.8e-10 39.2 0.0 7e-10 38.7 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain UPF0172 PF03665.13 BAJ51324.1 - 4.8e-07 30.0 0.1 8.8e-07 29.2 0.1 1.3 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0172) ubiquitin PF00240.23 BAJ51325.1 - 3.5e-13 49.1 0.0 4e-13 48.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 BAJ51325.1 - 1.8e-07 30.9 0.0 2e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like YukD PF08817.10 BAJ51325.1 - 0.0042 17.7 0.1 0.0061 17.2 0.1 1.4 1 1 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD TUG-UBL1 PF11470.8 BAJ51325.1 - 0.0071 16.5 0.0 0.0094 16.2 0.0 1.2 1 0 0 1 1 1 1 TUG ubiquitin-like domain Rad60-SLD_2 PF13881.6 BAJ51325.1 - 0.13 12.4 0.0 0.33 11.1 0.0 1.7 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 BAJ51325.1 - 0.14 12.8 0.0 0.16 12.5 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain UQ_con PF00179.26 BAJ51326.1 - 7.5e-29 100.2 0.0 9e-29 99.9 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 BAJ51326.1 - 0.091 12.5 0.0 0.25 11.0 0.0 1.7 1 1 0 1 1 1 0 Prokaryotic E2 family B ThiF PF00899.21 BAJ51327.1 - 5.3e-57 193.0 0.0 7.1e-57 192.6 0.0 1.1 1 0 0 1 1 1 1 ThiF family ubiquitin PF00240.23 BAJ51327.1 - 0.018 14.8 0.0 0.12 12.2 0.0 2.1 2 0 0 2 2 2 0 Ubiquitin family Ubiquitin_4 PF18036.1 BAJ51327.1 - 0.054 13.6 0.2 4.7 7.3 0.0 2.7 2 1 1 3 3 3 0 Ubiquitin-like domain 2-Hacid_dh_C PF02826.19 BAJ51327.1 - 0.1 11.9 0.0 0.49 9.7 0.0 2.0 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain USP7_C2 PF14533.6 BAJ51327.1 - 0.17 11.6 0.0 0.28 10.8 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-specific protease C-terminal zf-RING_2 PF13639.6 BAJ51328.1 - 1.1e-08 35.3 6.8 1.4e-08 34.9 6.8 1.2 1 0 0 1 1 1 1 Ring finger domain C1_2 PF03107.16 BAJ51328.1 - 6.1e-07 29.7 1.2 2.3e-06 27.8 0.2 1.9 2 0 0 2 2 2 1 C1 domain Zn_ribbon_17 PF17120.5 BAJ51328.1 - 1.9e-06 27.4 5.5 2.6e-06 27.0 5.5 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_3 PF13920.6 BAJ51328.1 - 2.1e-05 24.3 5.8 3.1e-05 23.7 5.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 BAJ51328.1 - 3.4e-05 23.7 6.2 0.00068 19.5 3.0 2.1 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 BAJ51328.1 - 7.7e-05 22.5 4.6 0.00016 21.5 4.6 1.5 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 BAJ51328.1 - 0.00017 21.8 8.4 0.00038 20.7 8.4 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 BAJ51328.1 - 0.0017 18.1 7.8 0.0047 16.7 7.8 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-HIT PF04438.16 BAJ51328.1 - 0.0092 15.8 3.1 0.0092 15.8 3.1 2.3 2 0 0 2 2 2 1 HIT zinc finger zf-RING_9 PF13901.6 BAJ51328.1 - 0.012 15.6 3.5 0.015 15.3 3.5 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon PHD PF00628.29 BAJ51328.1 - 0.021 14.7 7.3 0.043 13.7 7.3 1.5 1 1 0 1 1 1 0 PHD-finger zf-ANAPC11 PF12861.7 BAJ51328.1 - 0.026 14.6 4.7 0.29 11.2 4.7 2.0 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zf_RING PF16744.5 BAJ51328.1 - 0.033 14.3 4.2 0.051 13.7 4.1 1.4 1 1 0 1 1 1 0 KIAA1045 RING finger zf-RING_4 PF14570.6 BAJ51328.1 - 0.038 13.8 5.8 0.91 9.4 0.2 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain DZR PF12773.7 BAJ51328.1 - 0.054 13.5 7.0 2.2 8.4 7.0 2.2 1 1 0 1 1 1 0 Double zinc ribbon zf-RING-like PF08746.11 BAJ51328.1 - 0.062 13.6 3.6 0.062 13.6 3.6 1.6 2 0 0 2 2 2 0 RING-like domain zinc_ribbon_2 PF13240.6 BAJ51328.1 - 0.063 13.0 6.8 0.19 11.5 3.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Rad50_zn_hook PF04423.14 BAJ51328.1 - 0.082 12.8 5.3 0.17 11.8 0.5 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-ribbon_3 PF13248.6 BAJ51328.1 - 0.11 11.9 10.9 0.19 11.2 1.6 3.0 3 0 0 3 3 3 0 zinc-ribbon domain FANCL_C PF11793.8 BAJ51328.1 - 0.15 12.2 7.3 1.7 8.8 7.3 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain C1_1 PF00130.22 BAJ51328.1 - 0.19 11.6 6.6 0.32 10.9 5.2 1.8 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zinc_ribbon_9 PF14369.6 BAJ51328.1 - 0.23 11.7 6.6 13 6.2 0.0 3.0 2 1 0 2 2 2 0 zinc-ribbon zf-FPG_IleRS PF06827.14 BAJ51328.1 - 0.25 11.3 7.8 0.65 9.9 0.2 2.9 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS OrfB_Zn_ribbon PF07282.11 BAJ51328.1 - 0.25 11.3 3.3 0.22 11.5 0.7 1.9 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-RING_5 PF14634.6 BAJ51328.1 - 0.31 11.1 8.1 0.79 9.7 8.0 2.0 1 1 0 1 1 1 0 zinc-RING finger domain zf-LITAF-like PF10601.9 BAJ51328.1 - 0.35 11.2 7.4 5.1 7.4 0.2 2.5 1 1 2 3 3 3 0 LITAF-like zinc ribbon domain HypA PF01155.19 BAJ51328.1 - 0.45 10.6 5.0 0.28 11.2 1.6 1.9 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2256 PF10013.9 BAJ51328.1 - 0.56 10.4 6.4 6.9 6.9 0.2 3.0 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-C3HC4 PF00097.25 BAJ51328.1 - 0.57 10.1 8.1 6.3 6.8 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF983 PF06170.12 BAJ51328.1 - 0.92 10.0 4.1 30 5.1 0.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF983) zf-C2H2_4 PF13894.6 BAJ51328.1 - 1.3 10.1 6.2 15 6.8 0.3 3.2 3 0 0 3 3 3 0 C2H2-type zinc finger zf-H2C2_2 PF13465.6 BAJ51328.1 - 2.1 8.9 6.2 4.4 7.9 0.1 2.5 3 0 0 3 3 2 0 Zinc-finger double domain UPF0547 PF10571.9 BAJ51328.1 - 2.4 8.3 8.8 3.4 7.8 0.3 2.8 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 zf-Mss51 PF13824.6 BAJ51328.1 - 5.1 7.3 9.3 3 8.0 5.2 2.5 2 1 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-Di19 PF05605.12 BAJ51328.1 - 5.3 7.4 8.8 4.3 7.7 1.2 2.8 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding Zn_ribbon_SprT PF17283.2 BAJ51328.1 - 8.6 6.4 9.8 2.3 8.2 1.7 2.9 3 0 0 3 3 3 0 SprT-like zinc ribbon domain MCPsignal PF00015.21 BAJ51329.1 - 0.00056 19.8 0.1 0.00069 19.5 0.1 1.1 1 0 0 1 1 1 1 Methyl-accepting chemotaxis protein (MCP) signalling domain Baculo_PEP_C PF04513.12 BAJ51329.1 - 0.0029 17.7 0.4 0.0043 17.1 0.4 1.2 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus BLOC1_2 PF10046.9 BAJ51329.1 - 0.0052 17.1 1.1 0.007 16.6 1.1 1.2 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cep57_MT_bd PF06657.13 BAJ51329.1 - 0.0054 17.1 4.6 0.18 12.3 0.3 2.2 1 1 1 2 2 2 2 Centrosome microtubule-binding domain of Cep57 Prefoldin PF02996.17 BAJ51329.1 - 0.0073 16.2 2.6 1.1 9.2 0.1 2.1 1 1 1 2 2 2 2 Prefoldin subunit DUF1664 PF07889.12 BAJ51329.1 - 0.011 15.8 1.1 0.014 15.4 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) SlyX PF04102.12 BAJ51329.1 - 0.011 16.3 5.7 0.53 10.9 0.7 2.2 1 1 1 2 2 2 0 SlyX Cauli_AT PF03233.13 BAJ51329.1 - 0.011 15.6 0.3 0.012 15.5 0.3 1.2 1 0 0 1 1 1 0 Aphid transmission protein Vps5 PF09325.10 BAJ51329.1 - 0.012 15.2 0.5 0.016 14.8 0.5 1.2 1 0 0 1 1 1 0 Vps5 C terminal like HBM PF16591.5 BAJ51329.1 - 0.015 14.8 0.5 0.025 14.0 0.5 1.4 1 1 0 1 1 1 0 Helical bimodular sensor domain GAS PF13851.6 BAJ51329.1 - 0.017 14.5 1.7 0.022 14.1 1.7 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding FapA PF03961.13 BAJ51329.1 - 0.017 13.8 0.7 0.018 13.7 0.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A NPV_P10 PF05531.12 BAJ51329.1 - 0.017 15.6 1.5 0.052 14.0 1.5 1.8 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF948 PF06103.11 BAJ51329.1 - 0.017 15.4 0.7 0.066 13.5 0.7 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) T3SchapCesA PF11439.8 BAJ51329.1 - 0.021 15.0 0.6 0.11 12.7 0.6 2.0 1 1 0 1 1 1 0 Type III secretion system filament chaperone CesA LUC7 PF03194.15 BAJ51329.1 - 0.023 14.4 0.2 0.024 14.3 0.2 1.0 1 0 0 1 1 1 0 LUC7 N_terminus DASH_Duo1 PF08651.10 BAJ51329.1 - 0.024 14.4 0.9 0.071 12.9 0.2 1.9 1 1 1 2 2 2 0 DASH complex subunit Duo1 AAA_13 PF13166.6 BAJ51329.1 - 0.029 13.0 0.6 0.031 12.9 0.6 1.0 1 0 0 1 1 1 0 AAA domain Tropomyosin_1 PF12718.7 BAJ51329.1 - 0.03 14.5 4.0 0.031 14.4 4.0 1.2 1 0 0 1 1 1 0 Tropomyosin like Csm2_III-A PF03750.13 BAJ51329.1 - 0.033 15.0 0.4 0.13 13.1 0.2 1.9 1 1 1 2 2 2 0 Csm2 Type III-A DUF3461 PF11944.8 BAJ51329.1 - 0.039 14.1 0.5 0.048 13.8 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3461) FlxA PF14282.6 BAJ51329.1 - 0.042 13.8 1.2 0.059 13.4 1.2 1.3 1 1 0 1 1 1 0 FlxA-like protein YabA PF06156.13 BAJ51329.1 - 0.062 13.9 1.9 2.1 9.0 0.7 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF2203 PF09969.9 BAJ51329.1 - 0.062 14.0 0.8 0.072 13.8 0.8 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) SKA2 PF16740.5 BAJ51329.1 - 0.07 12.9 1.8 2.6 7.9 0.2 2.1 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 APG6_N PF17675.1 BAJ51329.1 - 0.073 13.6 4.9 0.038 14.5 3.1 1.4 2 0 0 2 2 1 0 Apg6 coiled-coil region Med9 PF07544.13 BAJ51329.1 - 0.084 13.0 2.4 0.38 10.9 1.6 2.1 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Syntaxin-6_N PF09177.11 BAJ51329.1 - 0.11 13.0 1.7 0.17 12.4 1.7 1.3 1 0 0 1 1 1 0 Syntaxin 6, N-terminal CorA PF01544.18 BAJ51329.1 - 0.29 10.4 3.9 0.76 9.0 0.8 1.9 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein DHR10 PF18595.1 BAJ51329.1 - 0.32 11.1 5.6 2.1 8.4 2.8 2.1 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain MobC PF05713.11 BAJ51329.1 - 0.37 11.3 3.1 2.3 8.8 0.4 2.6 2 1 0 2 2 2 0 Bacterial mobilisation protein (MobC) XhlA PF10779.9 BAJ51329.1 - 0.52 10.6 3.5 4.2 7.6 2.1 2.1 1 1 1 2 2 2 0 Haemolysin XhlA DUF1664 PF07889.12 BAJ51330.1 - 3.8e-05 23.7 26.9 0.01 15.9 6.7 3.7 1 1 3 4 4 4 3 Protein of unknown function (DUF1664) DUF812 PF05667.11 BAJ51330.1 - 0.00015 20.8 23.8 0.00015 20.8 23.8 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF812) DUF4201 PF13870.6 BAJ51330.1 - 0.00018 21.3 42.2 0.00084 19.1 15.5 3.3 1 1 2 3 3 3 1 Domain of unknown function (DUF4201) EzrA PF06160.12 BAJ51330.1 - 0.00058 18.2 23.3 0.00058 18.2 23.3 2.9 1 1 2 3 3 3 1 Septation ring formation regulator, EzrA Spc7 PF08317.11 BAJ51330.1 - 0.00065 18.7 49.1 0.006 15.5 18.8 3.1 1 1 2 3 3 3 2 Spc7 kinetochore protein Baculo_PEP_C PF04513.12 BAJ51330.1 - 0.0014 18.7 16.1 14 5.7 10.3 3.7 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus TMF_TATA_bd PF12325.8 BAJ51330.1 - 0.0015 18.8 50.1 0.17 12.1 5.5 4.5 1 1 4 5 5 5 2 TATA element modulatory factor 1 TATA binding COG2 PF06148.11 BAJ51330.1 - 0.0029 17.7 9.8 0.0029 17.7 9.8 4.1 1 1 2 3 3 3 1 COG (conserved oligomeric Golgi) complex component, COG2 Tektin PF03148.14 BAJ51330.1 - 0.0035 16.1 38.8 0.0037 16.1 0.1 4.0 2 1 2 4 4 4 2 Tektin family FliJ PF02050.16 BAJ51330.1 - 0.005 17.0 39.4 0.2 11.9 16.7 3.3 1 1 2 3 3 3 2 Flagellar FliJ protein DHR10 PF18595.1 BAJ51330.1 - 0.0075 16.3 14.2 0.0075 16.3 14.2 4.1 1 1 2 4 4 4 1 Designed helical repeat protein 10 domain BST2 PF16716.5 BAJ51330.1 - 0.014 16.0 2.5 0.014 16.0 2.5 3.7 1 1 2 3 3 2 0 Bone marrow stromal antigen 2 ZapB PF06005.12 BAJ51330.1 - 0.02 15.3 52.5 0.052 14.0 1.4 5.4 2 1 3 5 5 4 0 Cell division protein ZapB YscO PF07321.12 BAJ51330.1 - 0.021 14.8 3.3 0.021 14.8 3.3 4.0 1 1 1 3 3 2 0 Type III secretion protein YscO DUF3450 PF11932.8 BAJ51330.1 - 0.024 13.9 37.3 0.11 11.8 6.8 3.8 1 1 3 4 4 4 0 Protein of unknown function (DUF3450) Seryl_tRNA_N PF02403.22 BAJ51330.1 - 0.026 14.7 39.2 0.045 14.0 9.0 4.1 1 1 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain DUF948 PF06103.11 BAJ51330.1 - 0.027 14.7 15.0 0.099 12.9 0.4 4.3 1 1 3 4 4 4 0 Bacterial protein of unknown function (DUF948) TMF_DNA_bd PF12329.8 BAJ51330.1 - 0.027 14.5 1.7 0.027 14.5 1.7 4.8 3 2 2 5 5 5 0 TATA element modulatory factor 1 DNA binding DUF2937 PF11157.8 BAJ51330.1 - 0.04 13.6 10.6 0.14 11.9 0.7 4.0 2 2 2 4 4 4 0 Protein of unknown function (DUF2937) GAS PF13851.6 BAJ51330.1 - 0.058 12.7 46.2 0.15 11.4 18.2 3.0 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding HU-CCDC81_bac_2 PF18175.1 BAJ51330.1 - 0.059 13.3 11.3 0.78 9.7 0.0 4.7 5 1 0 5 5 4 0 CCDC81-like prokaryotic HU domain 2 Leu_zip PF15294.6 BAJ51330.1 - 0.067 12.7 34.5 0.015 14.8 16.2 2.2 1 1 0 2 2 2 0 Leucine zipper DUF4407 PF14362.6 BAJ51330.1 - 0.068 12.5 23.0 1 8.7 16.4 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) PRANC PF09372.10 BAJ51330.1 - 0.072 13.4 4.3 0.77 10.1 0.1 3.5 3 1 1 4 4 4 0 PRANC domain HrpB7 PF09486.10 BAJ51330.1 - 0.08 13.3 0.7 0.08 13.3 0.7 4.0 1 1 3 4 4 4 0 Bacterial type III secretion protein (HrpB7) HMMR_N PF15905.5 BAJ51330.1 - 0.1 12.1 45.2 0.98 8.8 21.4 3.1 1 1 2 3 3 3 0 Hyaluronan mediated motility receptor N-terminal DUF16 PF01519.16 BAJ51330.1 - 0.11 13.0 28.2 0.18 12.3 1.6 3.6 1 1 2 3 3 3 0 Protein of unknown function DUF16 MHC_II_beta PF00969.19 BAJ51330.1 - 0.11 12.6 0.2 0.53 10.4 0.0 2.3 2 1 0 2 2 2 0 Class II histocompatibility antigen, beta domain Sigma70_r4_2 PF08281.12 BAJ51330.1 - 0.12 12.1 8.8 3.1 7.6 0.3 3.7 3 0 0 3 3 2 0 Sigma-70, region 4 TPR_MLP1_2 PF07926.12 BAJ51330.1 - 0.12 12.4 50.7 0.63 10.1 18.9 4.1 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein NPV_P10 PF05531.12 BAJ51330.1 - 0.13 12.7 11.7 0.097 13.2 1.3 4.2 2 1 2 4 4 4 0 Nucleopolyhedrovirus P10 protein Prominin PF05478.11 BAJ51330.1 - 0.15 10.0 19.8 0.03 12.3 9.8 2.0 1 1 1 2 2 2 0 Prominin NFRKB_winged PF14465.6 BAJ51330.1 - 0.15 12.3 2.0 1.5 9.1 0.6 2.7 2 0 0 2 2 2 0 NFRKB Winged Helix-like KASH_CCD PF14662.6 BAJ51330.1 - 0.2 11.4 50.1 0.21 11.4 29.8 3.1 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH Fib_alpha PF08702.10 BAJ51330.1 - 0.24 11.6 28.2 2.5 8.3 9.3 3.5 1 1 1 3 3 3 0 Fibrinogen alpha/beta chain family Laminin_II PF06009.12 BAJ51330.1 - 0.4 10.7 29.0 0.34 10.9 5.5 3.6 1 1 3 4 4 4 0 Laminin Domain II COG5 PF10392.9 BAJ51330.1 - 0.41 10.8 25.2 0.27 11.4 1.9 3.8 1 1 1 3 3 3 0 Golgi transport complex subunit 5 MCPsignal PF00015.21 BAJ51330.1 - 0.55 10.0 15.5 2.7 7.8 0.5 3.2 2 1 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain MAD PF05557.13 BAJ51330.1 - 0.56 8.5 47.5 1.4 7.2 47.5 1.5 1 1 0 1 1 1 0 Mitotic checkpoint protein HAP1_N PF04849.13 BAJ51330.1 - 0.57 9.3 45.7 0.034 13.3 9.0 3.1 1 1 2 3 3 3 0 HAP1 N-terminal conserved region Prefoldin PF02996.17 BAJ51330.1 - 0.73 9.8 34.5 0.17 11.8 0.7 5.7 3 2 3 6 6 6 0 Prefoldin subunit APG6_N PF17675.1 BAJ51330.1 - 1.2 9.6 56.5 12 6.4 3.0 3.7 1 1 2 3 3 3 0 Apg6 coiled-coil region AAA_13 PF13166.6 BAJ51330.1 - 1.3 7.5 33.1 1.6 7.3 0.9 2.1 1 1 0 2 2 2 0 AAA domain HemX PF04375.14 BAJ51330.1 - 1.8 7.8 28.5 0.88 8.8 2.8 3.1 1 1 0 3 3 3 0 HemX, putative uroporphyrinogen-III C-methyltransferase Exonuc_VII_L PF02601.15 BAJ51330.1 - 2.5 7.6 32.4 1.1e+04 -4.3 32.4 2.6 1 1 0 1 1 0 0 Exonuclease VII, large subunit SHE3 PF17078.5 BAJ51330.1 - 3.1 7.4 33.2 9.7 5.8 0.5 4.1 1 1 1 3 3 3 0 SWI5-dependent HO expression protein 3 UPF0242 PF06785.11 BAJ51330.1 - 3.7 7.6 44.0 2.3 8.3 16.7 2.8 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus DUF4248 PF14053.6 BAJ51330.1 - 3.9 7.6 6.2 2.5 8.2 0.3 3.5 3 2 2 5 5 4 0 Domain of unknown function (DUF4248) Cauli_AT PF03233.13 BAJ51330.1 - 4.1 7.3 21.0 0.73 9.7 4.0 3.3 1 1 2 3 3 3 0 Aphid transmission protein OmpH PF03938.14 BAJ51330.1 - 5.1 7.4 38.8 2 8.7 13.1 3.6 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) ATG16 PF08614.11 BAJ51330.1 - 5.4 7.2 50.2 8.3 6.6 28.8 3.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) YabA PF06156.13 BAJ51330.1 - 6.1 7.5 37.4 2.4 8.9 6.3 4.3 1 1 2 3 3 3 0 Initiation control protein YabA TolA_bind_tri PF16331.5 BAJ51330.1 - 6.5 6.9 34.1 1.1 9.4 3.4 4.4 3 1 2 5 5 3 0 TolA binding protein trimerisation Rootletin PF15035.6 BAJ51330.1 - 7.9 6.4 40.8 26 4.7 19.6 3.0 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion DUF4618 PF15397.6 BAJ51330.1 - 9.1 5.6 37.4 20 4.5 20.8 3.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) YkyA PF10368.9 BAJ51330.1 - 9.1 5.9 44.4 16 5.1 7.3 3.4 1 1 2 3 3 3 0 Putative cell-wall binding lipoprotein zf-RING_2 PF13639.6 BAJ51331.1 - 5e-09 36.3 4.9 8e-09 35.7 4.9 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 BAJ51331.1 - 0.00022 21.0 4.5 0.00034 20.4 4.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 BAJ51331.1 - 0.00043 20.5 1.8 0.00076 19.7 1.8 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING-like PF08746.11 BAJ51331.1 - 0.00084 19.6 6.4 0.0018 18.6 6.5 1.6 1 1 0 1 1 1 1 RING-like domain zf-RING_9 PF13901.6 BAJ51331.1 - 0.00084 19.4 2.4 0.0012 18.9 2.4 1.1 1 0 0 1 1 1 1 Putative zinc-RING and/or ribbon PHD PF00628.29 BAJ51331.1 - 0.0014 18.5 4.8 0.0022 17.9 4.8 1.3 1 0 0 1 1 1 1 PHD-finger zf-RING_11 PF17123.5 BAJ51331.1 - 0.0018 17.9 3.0 0.0032 17.2 3.0 1.4 1 0 0 1 1 1 1 RING-like zinc finger zinc_ribbon_2 PF13240.6 BAJ51331.1 - 0.0028 17.3 4.4 0.22 11.3 0.6 2.3 2 0 0 2 2 2 2 zinc-ribbon domain C1_1 PF00130.22 BAJ51331.1 - 0.0032 17.3 1.9 0.0032 17.3 1.9 1.6 1 1 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Zf_RING PF16744.5 BAJ51331.1 - 0.0038 17.3 4.7 0.0062 16.6 4.7 1.4 1 0 0 1 1 1 1 KIAA1045 RING finger zf-RING_5 PF14634.6 BAJ51331.1 - 0.0067 16.4 5.3 0.0098 15.8 5.3 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 BAJ51331.1 - 0.0097 15.8 5.8 0.014 15.3 5.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 BAJ51331.1 - 0.05 13.2 5.6 0.084 12.5 5.6 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4_3 PF13920.6 BAJ51331.1 - 0.053 13.4 4.3 0.087 12.7 4.3 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 BAJ51331.1 - 0.06 13.2 5.8 0.52 10.2 6.2 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 Prok-RING_1 PF14446.6 BAJ51331.1 - 0.07 13.1 9.8 0.049 13.6 6.3 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 DZR PF12773.7 BAJ51331.1 - 0.12 12.4 7.3 0.93 9.6 7.3 2.0 1 1 0 1 1 1 0 Double zinc ribbon zf-RING_UBOX PF13445.6 BAJ51331.1 - 0.15 12.1 3.4 0.25 11.4 3.4 1.3 1 0 0 1 1 1 0 RING-type zinc-finger TF_Zn_Ribbon PF08271.12 BAJ51331.1 - 0.28 10.7 8.6 1 8.9 2.5 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 BAJ51331.1 - 0.4 10.8 5.1 1.4 9.1 2.0 2.4 2 1 0 2 2 2 0 Zinc ribbon domain UPF0547 PF10571.9 BAJ51331.1 - 0.41 10.8 8.7 0.35 11.0 2.9 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 FANCL_C PF11793.8 BAJ51331.1 - 0.48 10.6 7.5 15 5.9 7.5 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_4 PF14570.6 BAJ51331.1 - 0.92 9.3 6.8 5.2 7.0 6.9 1.9 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF1610 PF07754.11 BAJ51331.1 - 1 9.4 8.0 7.8 6.6 1.6 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) DUF35_N PF12172.8 BAJ51331.1 - 1.1 9.2 5.1 6.7 6.7 0.6 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Rubredoxin_2 PF18073.1 BAJ51331.1 - 1.7 8.5 4.3 26 4.7 0.2 2.5 2 0 0 2 2 2 0 Rubredoxin metal binding domain DUF1272 PF06906.11 BAJ51331.1 - 2 8.6 5.4 3.6 7.7 5.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) Trp_oprn_chp PF09534.10 BAJ51331.1 - 2.6 7.8 14.2 8.1 6.2 14.2 1.7 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF5336 PF17270.2 BAJ51331.1 - 2.8 7.5 12.1 4.6 6.8 11.5 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5336) zf-Mss51 PF13824.6 BAJ51331.1 - 5.7 7.1 7.6 2.7 8.2 2.0 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DNA_RNApol_7kD PF03604.13 BAJ51331.1 - 7.3 6.4 6.2 2.8 7.7 1.4 2.2 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit OrfB_Zn_ribbon PF07282.11 BAJ51331.1 - 7.6 6.5 7.9 2.2 8.3 2.1 2.2 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Zn_Tnp_IS1595 PF12760.7 BAJ51331.1 - 8.2 6.5 7.5 41 4.3 0.2 2.7 2 1 1 3 3 3 0 Transposase zinc-ribbon domain zf-RING_7 PF02591.15 BAJ51331.1 - 9.6 6.5 10.1 10 6.4 2.1 3.2 3 0 0 3 3 3 0 C4-type zinc ribbon domain zf-ribbon_3 PF13248.6 BAJ51331.1 - 9.8 5.7 12.1 5.7 6.5 0.4 3.1 2 1 0 2 2 2 0 zinc-ribbon domain HGTP_anticodon PF03129.20 BAJ51332.1 - 2.5e-22 78.8 0.1 4.4e-22 78.1 0.1 1.4 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 BAJ51332.1 - 4.2e-12 46.4 0.0 2.4e-11 44.0 0.0 2.1 2 1 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) zinc_ribbon_4 PF13717.6 BAJ51332.1 - 0.092 12.7 0.1 0.092 12.7 0.1 3.3 5 0 0 5 5 5 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 BAJ51332.1 - 0.13 12.4 0.1 7.9 6.7 0.0 2.5 2 0 0 2 2 2 0 Zinc ribbon domain Oxidored_q4 PF00507.19 BAJ51333.1 - 1e-11 44.8 0.1 1.7e-11 44.2 0.1 1.3 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABC2_membrane_3 PF12698.7 BAJ51333.1 - 0.00036 19.8 3.3 0.00043 19.5 3.3 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein MPS-4 PF17523.2 BAJ51333.1 - 1 9.5 4.4 13 6.0 0.3 2.5 3 0 0 3 3 3 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF3325 PF11804.8 BAJ51333.1 - 2.6 8.2 8.5 0.24 11.6 4.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3325) NADHdh PF00146.21 BAJ51334.1 - 1.4e-84 284.0 24.5 1.7e-84 283.7 24.5 1.0 1 0 0 1 1 1 1 NADH dehydrogenase E1_4HB PF16191.5 BAJ51335.1 - 0.17 12.1 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle Fer4 PF00037.27 BAJ51336.1 - 1.8e-10 40.2 10.7 1.7e-07 30.7 2.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 BAJ51336.1 - 3.6e-09 37.1 2.3 4.8e-05 23.9 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ51336.1 - 3.4e-07 30.3 1.2 0.0043 17.1 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ51336.1 - 5.1e-07 29.7 0.7 0.007 16.5 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 BAJ51336.1 - 5.5e-07 29.9 0.5 0.015 15.7 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 BAJ51336.1 - 1.4e-06 28.3 3.0 0.02 15.0 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 BAJ51336.1 - 1.6e-05 25.7 1.5 0.0067 17.3 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 BAJ51336.1 - 5e-05 23.8 2.5 0.11 13.1 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 BAJ51336.1 - 0.00011 22.0 11.4 0.0083 16.2 2.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 BAJ51336.1 - 0.00024 21.0 2.3 0.00024 21.0 2.3 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_22 PF17179.4 BAJ51336.1 - 0.0004 21.2 1.2 0.082 13.8 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 BAJ51336.1 - 0.0081 16.6 10.9 0.023 15.2 1.5 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.6 BAJ51336.1 - 0.0089 16.2 1.9 0.49 10.6 0.0 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 BAJ51336.1 - 0.23 12.2 6.9 1.4 9.7 0.8 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 BAJ51336.1 - 1.5 9.9 16.3 0.57 11.2 3.9 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 BAJ51336.1 - 2.9 8.5 9.3 2.5 8.7 0.5 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I COX1 PF00115.20 BAJ51337.1 - 1.8e-148 495.0 66.4 2.1e-148 494.8 66.4 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I COX2_TM PF02790.15 BAJ51337.1 - 0.97 9.6 6.9 0.13 12.4 0.8 2.8 2 0 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain COX2 PF00116.20 BAJ51338.1 - 1.9e-15 56.8 0.0 9e-14 51.4 0.0 2.1 1 1 1 2 2 2 2 Cytochrome C oxidase subunit II, periplasmic domain Cupredoxin_1 PF13473.6 BAJ51338.1 - 9.3e-10 38.6 0.0 1.5e-09 37.9 0.0 1.4 1 1 0 1 1 1 1 Cupredoxin-like domain SoxE PF06525.11 BAJ51338.1 - 0.15 11.6 0.0 7.7 6.0 0.0 2.2 1 1 1 2 2 2 0 Sulfocyanin (SoxE) domain FeoB_associated PF12669.7 BAJ51339.1 - 0.2 12.1 1.7 2 8.9 0.0 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein DUF2207 PF09972.9 BAJ51339.1 - 0.26 10.0 1.0 0.28 9.9 1.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5381 PF17353.2 BAJ51339.1 - 0.66 9.7 5.5 1.3 8.8 5.4 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5381) COX15-CtaA PF02628.15 BAJ51340.1 - 5e-10 39.0 16.7 9.1e-06 25.0 10.2 2.0 1 1 1 2 2 2 2 Cytochrome oxidase assembly protein Trp_oprn_chp PF09534.10 BAJ51340.1 - 6.5 6.5 9.4 22 4.8 9.4 1.8 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Bac_luciferase PF00296.20 BAJ51341.1 - 4e-53 180.9 0.0 4.2e-51 174.3 0.0 2.0 1 1 0 2 2 2 2 Luciferase-like monooxygenase Phos_pyr_kin PF08543.12 BAJ51342.1 - 6.9e-98 326.9 3.0 9.4e-98 326.5 3.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 BAJ51342.1 - 1.3e-63 213.6 0.2 2.8e-63 212.4 0.2 1.6 1 0 0 1 1 1 1 Thiamine-phosphate synthase PfkB PF00294.24 BAJ51342.1 - 1.4e-12 47.5 0.6 2.4e-12 46.8 0.6 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 BAJ51342.1 - 0.00022 20.8 4.0 0.00033 20.2 4.0 1.3 1 0 0 1 1 1 1 Carbohydrate kinase UDPG_MGDP_dh_C PF03720.15 BAJ51342.1 - 0.14 12.6 0.0 0.85 10.1 0.0 2.3 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NTP_transf_4 PF13562.6 BAJ51343.1 - 3.5e-26 92.3 0.0 5.3e-26 91.8 0.0 1.2 1 0 0 1 1 1 1 Sugar nucleotidyl transferase Hexapep PF00132.24 BAJ51343.1 - 1e-05 25.0 5.9 0.34 10.7 0.0 3.8 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) AAA_16 PF13191.6 BAJ51344.1 - 0.00057 20.3 0.1 0.0007 20.0 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 BAJ51344.1 - 0.0019 18.2 0.1 0.0037 17.2 0.1 1.5 1 0 0 1 1 1 1 NACHT domain AAA_22 PF13401.6 BAJ51344.1 - 0.0032 17.8 0.1 0.011 16.1 0.1 2.1 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.17 BAJ51344.1 - 0.004 17.3 0.0 0.0077 16.3 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain UvrD-helicase PF00580.21 BAJ51344.1 - 0.0054 16.3 0.1 0.0093 15.5 0.1 1.4 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_30 PF13604.6 BAJ51344.1 - 0.0055 16.4 0.0 0.0096 15.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 BAJ51344.1 - 0.0088 15.4 0.0 0.015 14.7 0.0 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family ABC_tran PF00005.27 BAJ51344.1 - 0.0097 16.4 0.4 0.011 16.2 0.4 1.5 1 1 0 1 1 1 1 ABC transporter ATPase_2 PF01637.18 BAJ51344.1 - 0.01 15.8 0.0 0.018 14.9 0.0 1.6 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_29 PF13555.6 BAJ51344.1 - 0.01 15.6 0.1 0.018 14.8 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 BAJ51344.1 - 0.015 14.8 0.1 0.035 13.6 0.1 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 BAJ51344.1 - 0.022 14.5 0.0 0.051 13.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 BAJ51344.1 - 0.039 14.2 0.0 0.075 13.3 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase ATP-synt_ab PF00006.25 BAJ51344.1 - 0.048 13.3 0.0 0.079 12.6 0.0 1.5 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA PF00004.29 BAJ51344.1 - 0.053 13.9 0.0 0.12 12.8 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 BAJ51344.1 - 0.062 13.6 0.1 0.16 12.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 BAJ51344.1 - 0.065 13.0 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation cobW PF02492.19 BAJ51344.1 - 0.08 12.5 0.2 0.13 11.8 0.2 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain DAP3 PF10236.9 BAJ51344.1 - 0.11 11.7 0.1 0.21 10.7 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 RsgA_GTPase PF03193.16 BAJ51344.1 - 0.11 12.4 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase Mg_chelatase PF01078.21 BAJ51344.1 - 0.13 11.6 0.1 0.22 10.9 0.1 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_23 PF13476.6 BAJ51344.1 - 0.15 12.6 0.5 0.31 11.5 0.1 1.6 2 1 0 2 2 2 0 AAA domain SRPRB PF09439.10 BAJ51344.1 - 0.16 11.4 0.4 0.35 10.3 0.1 1.6 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit TrwB_AAD_bind PF10412.9 BAJ51344.1 - 0.18 10.7 0.0 0.29 10.0 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ThiW PF09512.10 BAJ51345.1 - 1.1e-31 109.9 19.0 1e-30 106.9 19.0 1.9 1 1 0 1 1 1 1 Thiamine-precursor transporter protein (ThiW) ECF_trnsprt PF12822.7 BAJ51345.1 - 7.9e-06 26.1 20.4 3.1e-05 24.2 20.1 1.8 1 1 0 1 1 1 1 ECF transporter, substrate-specific component 5TM-5TMR_LYT PF07694.12 BAJ51345.1 - 0.0012 18.4 12.6 0.0012 18.4 12.6 2.3 1 1 1 2 2 2 1 5TMR of 5TMR-LYT GtrA PF04138.14 BAJ51346.1 - 3.4e-14 53.1 0.7 4e-14 52.8 0.7 1.1 1 0 0 1 1 1 1 GtrA-like protein SbmA_BacA PF05992.12 BAJ51346.1 - 0.04 13.4 1.6 3 7.2 0.2 2.0 1 1 1 2 2 2 0 SbmA/BacA-like family IMS PF00817.20 BAJ51347.1 - 1.6e-42 145.0 0.3 2.7e-42 144.3 0.1 1.5 2 0 0 2 2 2 1 impB/mucB/samB family IMS_C PF11799.8 BAJ51347.1 - 5.5e-08 33.5 0.7 1.2e-07 32.5 0.7 1.6 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 BAJ51347.1 - 9.2e-07 28.8 0.0 2.7e-06 27.4 0.0 1.9 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.6 BAJ51347.1 - 1.9e-05 25.2 0.1 0.0001 22.8 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain TfoX_C PF04994.13 BAJ51347.1 - 0.062 13.4 0.1 0.53 10.4 0.0 2.3 2 0 0 2 2 2 0 TfoX C-terminal domain mCpol PF18182.1 BAJ51347.1 - 0.097 13.0 0.1 1.4 9.2 0.0 2.5 2 1 0 2 2 2 0 minimal CRISPR polymerase domain Hist_deacetyl PF00850.19 BAJ51348.1 - 3.1e-72 243.7 0.0 3.9e-72 243.3 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain DUF99 PF01949.16 BAJ51349.1 - 7.5e-60 201.5 0.0 8.6e-60 201.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 PrsW-protease PF13367.6 BAJ51349.1 - 0.15 11.5 0.1 0.2 11.1 0.1 1.1 1 0 0 1 1 1 0 PrsW family intramembrane metalloprotease NTP_transferase PF00483.23 BAJ51350.1 - 1.5e-31 109.9 0.0 1.7e-31 109.7 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 BAJ51350.1 - 4.5e-15 56.4 0.0 5.7e-15 56.0 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 BAJ51350.1 - 2.2e-10 39.9 3.4 0.00013 21.5 0.1 3.8 2 1 2 4 4 4 3 Bacterial transferase hexapeptide (six repeats) IspD PF01128.19 BAJ51350.1 - 5.6e-05 23.0 0.0 0.0001 22.1 0.0 1.4 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.26 BAJ51350.1 - 0.011 15.6 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 SHR3_chaperone PF08229.11 BAJ51350.1 - 0.094 11.7 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 ER membrane protein SH3 Hexapep_2 PF14602.6 BAJ51350.1 - 0.75 9.6 10.2 0.28 10.9 0.9 4.0 3 2 1 4 4 4 0 Hexapeptide repeat of succinyl-transferase TP_methylase PF00590.20 BAJ51351.1 - 3.3e-24 86.0 0.0 4.9e-24 85.4 0.0 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.13 BAJ51351.1 - 1.4e-11 44.3 0.7 1.5e-10 41.0 0.3 2.7 3 0 0 3 3 3 1 Protein of unknown function (DUF357) CTP_transf_like PF01467.26 BAJ51352.1 - 6.5e-18 65.3 0.0 9.4e-18 64.8 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 BAJ51352.1 - 1e-06 28.7 0.4 7.4e-06 25.9 0.3 2.1 1 1 1 2 2 2 1 FAD synthetase CTP-dep_RFKase PF01982.16 BAJ51353.1 - 2.6e-28 98.5 0.1 3.8e-28 98.0 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF120 HTH_Crp_2 PF13545.6 BAJ51353.1 - 0.00053 19.9 0.7 0.0011 18.9 0.7 1.6 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 BAJ51353.1 - 0.0019 18.1 0.4 0.0037 17.1 0.4 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 BAJ51353.1 - 0.0065 16.3 0.9 0.011 15.6 0.4 1.6 2 0 0 2 2 2 1 MarR family Rrf2 PF02082.20 BAJ51353.1 - 0.085 13.2 0.2 0.17 12.3 0.2 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_20 PF12840.7 BAJ51353.1 - 0.12 12.5 0.2 0.29 11.2 0.2 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain Proteasome PF00227.26 BAJ51354.1 - 1.4e-47 161.6 0.3 1.7e-47 161.4 0.3 1.0 1 0 0 1 1 1 1 Proteasome subunit ATP-cone PF03477.16 BAJ51354.1 - 0.0074 16.8 0.0 0.7 10.5 0.0 2.2 2 0 0 2 2 2 2 ATP cone domain RTC PF01137.21 BAJ51355.1 - 3.6e-75 252.0 0.3 4.1e-75 251.8 0.3 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 BAJ51355.1 - 8.7e-19 68.0 0.1 1.5e-18 67.2 0.1 1.4 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain APCDDC PF14921.6 BAJ51355.1 - 0.056 12.9 0.0 0.083 12.3 0.0 1.2 1 0 0 1 1 1 0 Adenomatosis polyposis coli down-regulated 1 CTP_transf_like PF01467.26 BAJ51356.1 - 3.5e-12 46.7 0.0 1.1e-11 45.1 0.0 1.9 1 1 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 BAJ51356.1 - 0.13 12.1 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 FAD synthetase SAM_adeno_trans PF01887.16 BAJ51357.1 - 3.6e-72 242.6 0.1 4.1e-72 242.4 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase PTH2 PF01981.16 BAJ51358.1 - 6.2e-41 139.4 0.0 6.9e-41 139.2 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Rhomboid PF01694.22 BAJ51359.1 - 5.6e-35 120.6 15.2 5.6e-35 120.6 15.2 2.0 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.10 BAJ51359.1 - 0.015 15.8 3.2 0.015 15.8 3.2 3.0 2 1 1 3 3 3 0 Eukaryotic integral membrane protein (DUF1751) Oxidored_q6 PF01058.22 BAJ51360.1 - 3.5e-27 94.8 0.0 4.5e-27 94.4 0.0 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.19 BAJ51361.1 - 1.3e-35 122.6 0.0 1.7e-35 122.3 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RVT_N PF13655.6 BAJ51361.1 - 0.095 13.0 0.2 0.14 12.4 0.2 1.2 1 0 0 1 1 1 0 N-terminal domain of reverse transcriptase Imm61 PF15598.6 BAJ51361.1 - 0.16 11.8 0.1 8.2 6.3 0.0 2.1 1 1 1 2 2 2 0 Immunity protein 61 Complex1_49kDa PF00346.19 BAJ51362.1 - 1.2e-77 260.7 0.0 1.4e-74 250.6 0.0 2.3 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 BAJ51362.1 - 0.015 14.2 0.0 0.052 12.4 0.0 1.7 2 0 0 2 2 2 0 Nickel-dependent hydrogenase DNA_pol_B PF00136.21 BAJ51363.1 - 5.5e-58 196.8 0.0 8.2e-58 196.2 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 BAJ51363.1 - 1.3e-26 93.6 0.0 2.6e-26 92.6 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.6 BAJ51363.1 - 4.4e-06 26.8 0.0 1.7e-05 24.9 0.0 2.1 2 0 0 2 2 2 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 BAJ51363.1 - 0.00014 21.6 0.0 0.00037 20.2 0.0 1.7 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DUF1744 PF08490.12 BAJ51363.1 - 0.0053 15.4 0.0 0.01 14.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1744) VHS PF00790.19 BAJ51363.1 - 0.16 11.8 0.3 0.47 10.3 0.1 1.7 2 0 0 2 2 2 0 VHS domain Arginase PF00491.21 BAJ51364.1 - 8.5e-70 235.4 0.0 1.1e-69 235.1 0.0 1.0 1 0 0 1 1 1 1 Arginase family Mannosyl_trans PF05007.13 BAJ51365.1 - 0.00022 21.2 10.7 0.017 15.0 10.7 2.5 1 1 0 1 1 1 1 Mannosyltransferase (PIG-M) TruB-C_2 PF09157.11 BAJ51366.1 - 0.037 14.1 0.0 0.12 12.4 0.0 1.9 2 1 0 2 2 2 0 Pseudouridine synthase II TruB, C-terminal Methyltr_RsmB-F PF01189.17 BAJ51367.1 - 1.7e-48 165.0 0.0 2.3e-48 164.5 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 BAJ51367.1 - 4.9e-13 49.4 0.0 9.7e-13 48.4 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF FtsJ PF01728.19 BAJ51367.1 - 1.2e-06 28.7 0.0 2.6e-06 27.7 0.0 1.4 1 1 0 1 1 1 1 FtsJ-like methyltransferase PCMT PF01135.19 BAJ51367.1 - 0.00038 20.3 0.0 0.00064 19.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 BAJ51367.1 - 0.0015 19.2 0.0 0.003 18.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.17 BAJ51367.1 - 0.13 11.4 0.0 0.21 10.7 0.0 1.3 1 0 0 1 1 1 0 Fibrillarin Ubie_methyltran PF01209.18 BAJ51367.1 - 0.23 10.8 0.0 0.52 9.6 0.0 1.5 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family POR PF01558.18 BAJ51368.1 - 0.17 11.9 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Pyruvate ferredoxin/flavodoxin oxidoreductase DUF87 PF01935.17 BAJ51369.1 - 3.7e-15 56.6 0.0 8.1e-15 55.5 0.0 1.5 2 0 0 2 2 2 1 Helicase HerA, central domain CLP1_P PF16575.5 BAJ51369.1 - 0.019 14.8 0.0 0.039 13.8 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_22 PF13401.6 BAJ51369.1 - 0.019 15.2 0.2 14 5.9 0.1 3.0 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.6 BAJ51369.1 - 0.022 14.5 0.5 0.77 9.5 0.1 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain TrwB_AAD_bind PF10412.9 BAJ51369.1 - 0.061 12.2 0.0 0.14 11.1 0.0 1.5 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NurA PF09376.10 BAJ51370.1 - 0.00094 18.9 0.2 0.015 15.0 0.0 2.6 2 1 0 2 2 2 1 NurA domain Tenui_PVC2 PF06656.11 BAJ51370.1 - 0.17 9.7 0.1 0.26 9.1 0.1 1.1 1 0 0 1 1 1 0 Tenuivirus PVC2 protein H-kinase_dim PF02895.14 BAJ51370.1 - 0.21 12.0 1.1 0.47 10.9 1.1 1.5 1 0 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain Penicillinase_R PF03965.16 BAJ51371.1 - 0.0077 16.6 0.1 0.019 15.3 0.0 1.6 1 1 0 1 1 1 1 Penicillinase repressor HTH_1 PF00126.27 BAJ51372.1 - 0.0078 16.2 0.1 0.016 15.2 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family AbiEi_4 PF13338.6 BAJ51372.1 - 0.014 15.5 0.0 0.04 14.1 0.0 1.8 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin MarR_2 PF12802.7 BAJ51372.1 - 0.023 14.6 0.1 0.04 13.8 0.1 1.5 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 BAJ51372.1 - 0.034 14.2 0.1 0.063 13.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Rio2_N PF09202.11 BAJ51372.1 - 0.037 14.2 0.0 0.089 13.0 0.0 1.6 2 0 0 2 2 2 0 Rio2, N-terminal HTH_12 PF08461.10 BAJ51372.1 - 0.1 12.6 0.0 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Mrr_N PF14338.6 BAJ51372.1 - 0.14 12.3 0.0 0.3 11.3 0.0 1.6 1 0 0 1 1 1 0 Mrr N-terminal domain HTH_24 PF13412.6 BAJ51373.1 - 0.0026 17.3 0.0 0.0049 16.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding EAP30 PF04157.16 BAJ51373.1 - 0.019 14.2 0.1 0.025 13.9 0.1 1.1 1 0 0 1 1 1 0 EAP30/Vps36 family PaaX PF07848.12 BAJ51373.1 - 0.077 13.2 0.1 0.2 11.9 0.0 1.8 2 1 0 2 2 2 0 PaaX-like protein DUF2207 PF09972.9 BAJ51374.1 - 0.2 10.4 0.1 0.22 10.3 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DPM2 PF07297.12 BAJ51374.1 - 0.99 9.8 5.0 13 6.1 5.0 2.0 1 1 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) FrhB_FdhB_C PF04432.13 BAJ51376.1 - 1.1e-37 129.2 0.0 2.3e-37 128.2 0.0 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 BAJ51376.1 - 8.5e-22 77.1 0.1 1.8e-21 76.0 0.0 1.6 2 0 0 2 2 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_8 PF13183.6 BAJ51376.1 - 7.8e-09 35.9 1.5 0.002 18.5 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 BAJ51376.1 - 2.7e-08 33.3 14.6 0.00015 21.4 3.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 BAJ51376.1 - 4.3e-08 33.1 9.9 1.1e-07 31.9 9.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ51376.1 - 1.2e-07 31.8 9.4 1.2e-07 31.8 9.4 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 BAJ51376.1 - 3.6e-07 31.0 5.2 0.0082 17.0 0.9 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 BAJ51376.1 - 3.1e-06 27.7 13.7 3.1e-06 27.7 13.7 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 BAJ51376.1 - 3.6e-06 26.8 13.8 0.0014 18.6 3.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 BAJ51376.1 - 4.2e-06 27.2 7.8 0.012 16.1 0.4 2.9 3 0 0 3 3 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_2 PF12797.7 BAJ51376.1 - 0.00024 21.0 22.4 0.0026 17.7 4.9 2.7 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 BAJ51376.1 - 0.00035 21.3 18.7 0.072 14.1 3.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 BAJ51376.1 - 0.00041 20.4 15.0 0.024 14.7 15.2 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 BAJ51376.1 - 0.00046 20.5 16.9 0.016 15.6 0.4 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 BAJ51376.1 - 0.00078 19.6 10.1 0.002 18.3 10.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 BAJ51376.1 - 0.0013 19.3 14.2 0.048 14.2 0.8 2.7 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 BAJ51376.1 - 0.27 12.0 11.5 1.5 9.6 2.4 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 BAJ51376.1 - 4.4 8.2 12.1 5.7 7.8 3.6 2.5 1 1 3 4 4 4 0 4Fe-4S dicluster domain Zincin_1 PF06262.11 BAJ51377.1 - 0.1 12.7 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 Zincin-like metallopeptidase Peptidase_M10 PF00413.24 BAJ51377.1 - 0.1 12.4 0.2 0.19 11.6 0.2 1.4 1 1 0 1 1 1 0 Matrixin UPF0054 PF02130.17 BAJ51377.1 - 0.12 12.2 0.1 0.18 11.6 0.1 1.5 1 1 0 1 1 1 0 Uncharacterized protein family UPF0054 DUF5630 PF18632.1 BAJ51377.1 - 0.16 11.3 0.4 0.76 9.0 0.3 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5630) Fer4 PF00037.27 BAJ51378.1 - 1.1e-12 47.1 14.3 1.6e-06 27.7 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 BAJ51378.1 - 9.3e-10 39.0 24.9 9.2e-07 29.4 7.6 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAJ51378.1 - 4.3e-07 29.9 5.0 1.1e-06 28.6 5.0 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAJ51378.1 - 8.2e-07 29.1 6.4 2.2e-05 24.5 7.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 BAJ51378.1 - 5e-06 26.6 6.1 0.017 15.2 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 BAJ51378.1 - 4.2e-05 24.4 7.0 0.13 13.2 4.2 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 BAJ51378.1 - 4.4e-05 23.4 14.2 0.017 15.2 2.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 BAJ51378.1 - 6.1e-05 23.4 4.7 0.00025 21.4 5.1 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 BAJ51378.1 - 0.00027 21.1 0.9 0.11 12.7 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 BAJ51378.1 - 0.00071 20.3 13.0 0.017 16.0 4.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 BAJ51378.1 - 0.00072 20.0 5.8 0.0068 16.9 6.7 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 BAJ51378.1 - 0.00096 19.5 7.3 0.043 14.3 2.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain ETF_QO PF05187.13 BAJ51378.1 - 0.0026 17.9 0.8 0.057 13.6 0.8 2.1 1 1 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_13 PF13370.6 BAJ51378.1 - 0.027 15.0 12.7 0.03 14.9 0.4 2.7 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 BAJ51378.1 - 0.037 14.9 1.1 4.7 8.1 0.4 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 BAJ51378.1 - 0.044 13.9 10.7 0.18 12.0 0.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 BAJ51378.1 - 0.082 13.7 1.2 0.082 13.7 1.2 2.8 2 1 1 3 3 3 0 4Fe-4S single cluster domain B3_4 PF03483.17 BAJ51379.1 - 3.2e-26 92.0 0.0 5.1e-26 91.4 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain CBS PF00571.28 BAJ51380.1 - 1.5e-32 111.8 0.3 8.9e-16 58.1 0.1 2.1 2 0 0 2 2 2 2 CBS domain IF3_N PF05198.16 BAJ51380.1 - 0.001 19.3 0.0 0.62 10.4 0.0 2.5 2 0 0 2 2 2 2 Translation initiation factor IF-3, N-terminal domain AFOR_C PF01314.18 BAJ51381.1 - 5.2e-64 216.6 0.0 7e-64 216.2 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 BAJ51381.1 - 1.8e-50 171.6 0.2 3.2e-50 170.8 0.2 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldo_ket_red PF00248.21 BAJ51382.1 - 2.1e-69 234.0 0.0 2.4e-69 233.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DZR PF12773.7 BAJ51383.1 - 1e-06 28.7 3.7 1.2e-05 25.2 4.4 2.0 1 1 1 2 2 2 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 BAJ51383.1 - 0.0015 18.2 1.6 0.0015 18.2 1.6 2.7 3 0 0 3 3 3 1 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 BAJ51383.1 - 0.0015 18.3 0.2 0.0015 18.3 0.2 2.5 2 1 0 2 2 2 1 SprT-like zinc ribbon domain zf-RanBP PF00641.18 BAJ51383.1 - 0.023 14.0 1.8 0.023 14.0 1.8 2.4 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others DUF1358 PF07096.11 BAJ51383.1 - 0.1 12.6 0.4 0.25 11.3 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1358) zinc-ribbons_6 PF07191.12 BAJ51383.1 - 0.13 12.3 4.4 0.28 11.2 4.3 1.6 1 1 0 1 1 1 0 zinc-ribbons UPF0547 PF10571.9 BAJ51383.1 - 0.14 12.3 10.3 0.15 12.2 4.9 2.5 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-C3HC4_3 PF13920.6 BAJ51383.1 - 0.42 10.5 7.0 2.6 8.0 0.2 2.9 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Ribosomal_L40e PF01020.17 BAJ51383.1 - 0.54 10.2 4.1 9.3 6.2 1.1 2.3 2 0 0 2 2 2 0 Ribosomal L40e family zf-CHY PF05495.12 BAJ51383.1 - 0.86 10.1 3.7 4 8.0 3.7 1.9 1 1 0 1 1 1 0 CHY zinc finger FYVE PF01363.21 BAJ51383.1 - 1.3 9.3 4.9 3 8.1 0.1 2.3 1 1 1 2 2 2 0 FYVE zinc finger HypA PF01155.19 BAJ51383.1 - 2 8.5 5.5 1e+02 2.9 5.5 2.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-LITAF-like PF10601.9 BAJ51383.1 - 2.7 8.3 6.3 2.3 8.5 2.9 2.6 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 BAJ51383.1 - 3.3 7.8 6.7 4.5 7.3 1.1 2.5 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 BAJ51383.1 - 4.9 7.3 10.1 9.5 6.4 0.6 3.2 2 2 1 3 3 3 0 Zinc ribbon domain C1_2 PF03107.16 BAJ51383.1 - 9.3 6.7 6.1 2.3e+02 2.2 6.1 2.6 1 1 0 1 1 1 0 C1 domain DUF4364 PF14277.6 BAJ51386.1 - 0.01 15.6 0.4 0.56 9.9 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4364) Vip3A_N PF12495.8 BAJ51386.1 - 0.066 13.1 0.2 0.093 12.6 0.2 1.3 1 0 0 1 1 1 0 Vegetative insecticide protein 3A N terminal ArsA_HSP20 PF17886.1 BAJ51387.1 - 3.3e-13 49.0 0.0 4.9e-13 48.4 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 BAJ51387.1 - 5.5e-13 49.0 0.0 9e-13 48.3 0.0 1.4 1 0 0 1 1 1 1 Hsp20/alpha crystallin family PIH1_CS PF18201.1 BAJ51387.1 - 0.00031 21.1 0.0 0.00047 20.5 0.0 1.3 1 0 0 1 1 1 1 PIH1 CS-like domain PAC2 PF09754.9 BAJ51388.1 - 5.6e-34 118.0 0.0 6.5e-34 117.8 0.0 1.0 1 0 0 1 1 1 1 PAC2 family AMP-binding PF00501.28 BAJ51389.1 - 1.7e-91 306.9 0.0 2.1e-91 306.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 BAJ51389.1 - 1.8e-27 96.1 0.2 4.2e-27 94.9 0.2 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 BAJ51389.1 - 4.7e-18 64.9 2.8 1.1e-17 63.6 2.8 1.7 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus 5-FTHF_cyc-lig PF01812.20 BAJ51390.1 - 1.6e-32 112.9 0.0 1.9e-32 112.6 0.0 1.1 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family bact-PGI_C PF10432.9 BAJ51391.1 - 8.3e-29 100.6 0.0 1.2e-28 100.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial phospho-glucose isomerase C-terminal SIS domain DUF4888 PF16229.5 BAJ51391.1 - 0.02 14.8 0.1 0.054 13.5 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4888) SIS PF01380.22 BAJ51391.1 - 0.035 14.0 0.1 9.1 6.1 0.1 2.9 2 2 0 2 2 2 0 SIS domain MoCF_biosynth PF00994.24 BAJ51392.1 - 3.8e-34 117.4 0.0 6e-34 116.8 0.0 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain Metallophos_2 PF12850.7 BAJ51393.1 - 1.2e-17 64.6 0.0 2.2e-17 63.8 0.0 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 BAJ51393.1 - 3.4e-17 62.6 0.1 4.7e-14 52.3 0.0 2.2 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily Metallophos PF00149.28 BAJ51393.1 - 2.7e-16 60.7 0.0 3.6e-16 60.3 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase CBS PF00571.28 BAJ51394.1 - 7.6e-25 87.1 8.4 2.5e-13 50.2 1.4 2.2 2 0 0 2 2 2 2 CBS domain Prok-RING_1 PF14446.6 BAJ51394.1 - 0.0076 16.2 4.3 0.019 14.8 4.3 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 zf-BED PF02892.15 BAJ51394.1 - 0.034 14.2 3.1 1.2 9.3 1.0 2.3 2 0 0 2 2 2 0 BED zinc finger zf_C2H2_13 PF18508.1 BAJ51394.1 - 0.075 12.6 1.6 0.081 12.5 0.2 1.7 2 0 0 2 2 2 0 Zinc finger domain zinc_ribbon_2 PF13240.6 BAJ51394.1 - 0.61 9.9 5.4 6.2 6.7 0.2 2.7 2 1 0 2 2 2 0 zinc-ribbon domain zf-CHCC PF10276.9 BAJ51394.1 - 4.7 7.4 7.8 6.2 7.0 1.7 2.3 2 0 0 2 2 2 0 Zinc-finger domain Ribosomal_S27e PF01667.17 BAJ51394.1 - 5.2 6.8 6.8 2.7 7.8 3.1 2.3 2 1 1 3 3 3 0 Ribosomal protein S27 2-Hacid_dh_C PF02826.19 BAJ51395.1 - 8.4e-41 139.3 0.0 1.3e-40 138.7 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 BAJ51395.1 - 1.3e-12 47.6 0.0 1.6e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 BAJ51395.1 - 4.1e-06 27.0 0.0 8.6e-06 25.9 0.0 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IlvN PF07991.12 BAJ51395.1 - 3.8e-05 23.3 0.0 0.00015 21.4 0.0 2.0 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 BAJ51395.1 - 0.0037 17.5 0.0 0.0083 16.3 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 BAJ51395.1 - 0.012 15.7 0.2 0.055 13.5 0.1 2.1 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Pyr_redox PF00070.27 BAJ51395.1 - 0.012 16.2 0.2 0.025 15.1 0.2 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 BAJ51395.1 - 0.039 14.4 0.2 0.11 12.9 0.0 1.9 2 0 0 2 2 2 0 Putative NAD(P)-binding F420_oxidored PF03807.17 BAJ51395.1 - 0.08 13.5 0.5 0.69 10.5 0.0 2.5 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent PDH PF02153.17 BAJ51395.1 - 0.1 11.6 0.0 0.19 10.7 0.0 1.4 1 0 0 1 1 1 0 Prephenate dehydrogenase ThiF PF00899.21 BAJ51395.1 - 0.16 11.3 0.1 0.31 10.4 0.1 1.4 1 0 0 1 1 1 0 ThiF family HxlR PF01638.17 BAJ51396.1 - 5.8e-25 87.0 0.1 6.9e-25 86.7 0.1 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 BAJ51396.1 - 0.00088 19.1 0.0 0.0025 17.6 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.22 BAJ51396.1 - 0.0023 17.8 0.0 0.0054 16.6 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 BAJ51396.1 - 0.003 17.6 0.0 0.006 16.6 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 BAJ51396.1 - 0.0092 15.9 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 BAJ51396.1 - 0.017 15.0 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 MarR family Crp PF00325.20 BAJ51396.1 - 0.033 13.8 1.2 0.038 13.7 0.2 1.7 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family TrmB PF01978.19 BAJ51396.1 - 0.036 13.9 0.0 0.049 13.5 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 BAJ51396.1 - 0.14 11.7 0.1 0.27 10.8 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DoxX PF07681.12 BAJ51397.1 - 2.5e-14 53.6 10.4 2.5e-14 53.6 10.4 2.1 1 1 1 2 2 2 1 DoxX DoxX_2 PF13564.6 BAJ51397.1 - 2e-10 40.7 13.4 2.1e-10 40.6 4.6 2.5 1 1 1 2 2 2 2 DoxX-like family FxsA PF04186.13 BAJ51397.1 - 0.00068 19.7 8.2 0.00068 19.7 8.2 2.1 1 1 1 2 2 2 1 FxsA cytoplasmic membrane protein DoxD PF04173.13 BAJ51397.1 - 0.0097 15.8 10.9 0.029 14.3 0.1 2.6 2 1 0 2 2 2 2 TQO small subunit DoxD Fe_dep_repress PF01325.19 BAJ51398.1 - 6.1e-16 58.4 1.0 1.9e-15 56.8 0.2 2.2 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 BAJ51398.1 - 3.5e-10 39.8 1.6 3.5e-10 39.8 1.6 1.8 2 0 0 2 2 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_24 PF13412.6 BAJ51398.1 - 1.1e-07 31.2 0.0 3.4e-07 29.7 0.0 1.9 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 BAJ51398.1 - 1e-05 25.3 0.1 6e-05 22.8 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 BAJ51398.1 - 3.9e-05 24.1 0.8 0.00014 22.3 0.0 2.3 3 1 1 4 4 2 1 Winged helix DNA-binding domain Penicillinase_R PF03965.16 BAJ51398.1 - 0.00026 21.3 0.2 0.00066 20.0 0.2 1.9 1 1 0 1 1 1 1 Penicillinase repressor MarR PF01047.22 BAJ51398.1 - 0.0011 18.9 0.0 0.0038 17.1 0.0 1.9 2 0 0 2 2 1 1 MarR family DUF4423 PF14394.6 BAJ51398.1 - 0.0017 18.1 0.1 0.0063 16.2 0.0 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4423) TrmB PF01978.19 BAJ51398.1 - 0.0017 18.2 1.2 0.0062 16.4 0.2 2.5 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 BAJ51398.1 - 0.0018 18.0 2.1 0.0038 17.0 0.0 2.7 5 0 0 5 5 2 1 IclR helix-turn-helix domain Topoisom_bac PF01131.20 BAJ51398.1 - 0.0049 15.9 0.0 0.0073 15.4 0.0 1.3 1 0 0 1 1 1 1 DNA topoisomerase HTH_23 PF13384.6 BAJ51398.1 - 0.0055 16.5 0.0 0.016 15.0 0.0 1.9 1 1 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 BAJ51398.1 - 0.011 15.8 0.6 1.1 9.4 0.0 3.3 3 1 0 3 3 3 0 Winged helix-turn helix Rrf2 PF02082.20 BAJ51398.1 - 0.011 16.0 0.1 0.074 13.4 0.0 2.2 2 1 0 2 2 2 0 Transcriptional regulator AbiEi_4 PF13338.6 BAJ51398.1 - 0.013 15.6 0.0 0.14 12.3 0.0 2.4 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin PAX PF00292.18 BAJ51398.1 - 0.017 15.0 0.1 0.13 12.1 0.0 2.0 1 1 1 2 2 2 0 'Paired box' domain HTH_7 PF02796.15 BAJ51398.1 - 0.018 15.1 0.1 0.14 12.3 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Cullin_Nedd8 PF10557.9 BAJ51398.1 - 0.02 14.9 0.1 0.094 12.8 0.0 2.3 2 2 0 2 2 2 0 Cullin protein neddylation domain HTH_Crp_2 PF13545.6 BAJ51398.1 - 0.021 14.8 0.0 0.054 13.5 0.0 1.8 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma54_DBD PF04552.13 BAJ51398.1 - 0.036 13.8 0.3 0.1 12.3 0.3 1.9 1 1 0 1 1 1 0 Sigma-54, DNA binding domain LexA_DNA_bind PF01726.16 BAJ51398.1 - 0.036 13.8 0.0 0.14 11.9 0.0 1.9 2 0 0 2 2 2 0 LexA DNA binding domain E3_UFM1_ligase PF09743.9 BAJ51398.1 - 0.038 13.6 0.0 0.089 12.4 0.0 1.5 1 1 0 1 1 1 0 E3 UFM1-protein ligase 1 HTH_AsnC-type PF13404.6 BAJ51398.1 - 0.041 13.7 1.4 0.069 13.0 0.1 2.2 2 0 0 2 2 1 0 AsnC-type helix-turn-helix domain Arfaptin PF06456.13 BAJ51398.1 - 0.054 13.1 0.6 2.4 7.7 0.1 2.0 2 0 0 2 2 2 0 Arfaptin-like domain HTH_38 PF13936.6 BAJ51398.1 - 0.054 13.3 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2789 PF10982.8 BAJ51398.1 - 0.06 13.5 0.1 0.2 11.9 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2789) Exo70 PF03081.15 BAJ51398.1 - 0.061 12.4 0.3 0.087 11.9 0.3 1.3 1 1 0 1 1 1 0 Exo70 exocyst complex subunit HTH_11 PF08279.12 BAJ51398.1 - 0.062 13.3 0.0 0.21 11.6 0.0 1.9 1 0 0 1 1 1 0 HTH domain GntR PF00392.21 BAJ51398.1 - 0.065 12.9 1.0 0.55 9.9 0.0 2.9 3 1 0 3 3 3 0 Bacterial regulatory proteins, gntR family CtsR PF05848.11 BAJ51398.1 - 0.098 12.6 0.0 0.24 11.3 0.0 1.6 1 0 0 1 1 1 0 CtsR N-terminal HTH domain HTH_47 PF16221.5 BAJ51398.1 - 0.12 11.9 0.0 0.25 10.9 0.0 1.5 1 0 0 1 1 1 0 winged helix-turn-helix HMGL-like PF00682.19 BAJ51399.1 - 6e-45 153.9 0.1 9.1e-45 153.3 0.1 1.2 1 0 0 1 1 1 1 HMGL-like Radical_SAM PF04055.21 BAJ51399.1 - 7.7e-05 23.1 0.7 0.62 10.4 0.0 3.0 3 1 1 4 4 4 2 Radical SAM superfamily AP_endonuc_2 PF01261.24 BAJ51399.1 - 0.011 15.1 0.1 0.023 14.2 0.1 1.6 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel CBS PF00571.28 BAJ51400.1 - 1.7e-30 105.2 12.2 1.1e-16 61.0 2.8 2.1 2 0 0 2 2 2 2 CBS domain Ribosomal_L44 PF00935.19 BAJ51401.1 - 6.1e-13 49.1 2.7 6.1e-13 49.1 2.7 1.6 2 1 0 2 2 2 1 Ribosomal protein L44 ribosomal_L24 PF17136.4 BAJ51401.1 - 0.024 15.0 0.5 0.04 14.3 0.3 1.6 1 1 0 1 1 1 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 Ribosomal_S27e PF01667.17 BAJ51402.1 - 1.6e-18 66.2 1.1 1.8e-18 66.0 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 BAJ51402.1 - 0.00042 19.8 0.5 0.00058 19.3 0.5 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zf-ribbon_3 PF13248.6 BAJ51402.1 - 0.0013 18.1 2.0 0.71 9.4 0.2 2.2 2 0 0 2 2 2 2 zinc-ribbon domain eIF-5_eIF-2B PF01873.17 BAJ51402.1 - 0.011 15.7 1.3 0.014 15.3 1.3 1.2 1 0 0 1 1 1 0 Domain found in IF2B/IF5 zf-C2H2_3 PF13878.6 BAJ51402.1 - 0.012 15.4 0.2 1.3 8.9 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF3797 PF12677.7 BAJ51402.1 - 0.019 14.8 4.8 0.02 14.7 0.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-BED PF02892.15 BAJ51402.1 - 0.042 13.9 0.1 2.6 8.1 0.0 2.2 2 0 0 2 2 2 0 BED zinc finger Zn_Tnp_IS91 PF14319.6 BAJ51402.1 - 0.048 13.7 0.2 0.058 13.4 0.2 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain HypA PF01155.19 BAJ51402.1 - 0.053 13.5 0.2 0.063 13.3 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Desulfoferrod_N PF06397.12 BAJ51402.1 - 0.058 13.0 2.9 0.91 9.2 0.2 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain PADR1 PF08063.12 BAJ51402.1 - 0.062 13.1 2.2 0.073 12.9 0.6 1.7 1 1 1 2 2 2 0 PADR1 (NUC008) domain C1_1 PF00130.22 BAJ51402.1 - 0.067 13.1 0.5 0.092 12.6 0.5 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF4503 PF14951.6 BAJ51402.1 - 0.095 11.1 0.2 0.11 10.9 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4503) Rubredoxin_2 PF18073.1 BAJ51402.1 - 0.11 12.2 2.2 6 6.7 0.4 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Zn-ribbon_8 PF09723.10 BAJ51402.1 - 0.11 12.6 0.6 0.21 11.7 0.6 1.4 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_6 PF14599.6 BAJ51402.1 - 0.14 12.2 1.6 0.23 11.5 1.6 1.5 1 1 0 1 1 1 0 Zinc-ribbon DUF1451 PF07295.11 BAJ51402.1 - 0.16 12.0 0.4 0.21 11.6 0.4 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain zf-DNL PF05180.12 BAJ51402.1 - 0.18 11.8 0.3 0.18 11.8 0.3 2.0 1 1 1 2 2 2 0 DNL zinc finger zf-AN1 PF01428.16 BAJ51402.1 - 0.18 12.0 2.5 2.9 8.1 0.2 2.1 1 1 1 2 2 2 0 AN1-like Zinc finger TFIIS_C PF01096.18 BAJ51402.1 - 0.19 11.6 3.4 5.4 6.9 0.5 2.1 1 1 1 2 2 2 0 Transcription factor S-II (TFIIS) ZZ PF00569.17 BAJ51402.1 - 0.23 11.3 5.7 2 8.3 0.6 2.1 1 1 1 2 2 2 0 Zinc finger, ZZ type A2L_zn_ribbon PF08792.10 BAJ51402.1 - 0.24 11.2 5.0 0.4 10.4 5.0 1.4 1 1 0 1 1 1 0 A2L zinc ribbon domain zf-ACC PF17848.1 BAJ51402.1 - 0.24 11.5 3.5 2.3 8.4 0.1 2.3 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Prok-RING_1 PF14446.6 BAJ51402.1 - 0.31 11.0 4.5 8.4 6.4 0.3 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zinc_ribbon_13 PF09855.9 BAJ51402.1 - 0.35 11.1 0.2 0.35 11.1 0.2 2.0 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) S1 PF00575.23 BAJ51403.1 - 1.8e-13 50.6 0.3 4e-13 49.5 0.3 1.6 1 0 0 1 1 1 1 S1 RNA binding domain EIF_2_alpha PF07541.12 BAJ51403.1 - 6.7e-11 42.3 0.9 1.8e-10 40.9 0.2 1.9 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit PriA_C PF18074.1 BAJ51403.1 - 0.0007 20.4 0.6 1.2 9.9 0.2 2.6 2 0 0 2 2 2 2 Primosomal protein N C-terminal domain TauE PF01925.19 BAJ51405.1 - 8.4e-35 120.5 36.9 9.7e-35 120.3 36.9 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Peptidase_M50 PF02163.22 BAJ51406.1 - 0.0002 20.7 19.2 0.0012 18.2 1.1 3.5 2 1 1 3 3 3 2 Peptidase family M50 TMIE PF16038.5 BAJ51406.1 - 0.6 10.0 2.0 1.2 9.0 2.0 1.6 1 0 0 1 1 1 0 TMIE protein 2TM PF13239.6 BAJ51406.1 - 2.8 8.3 10.4 8.3 6.8 0.0 3.0 3 0 0 3 3 3 0 2TM domain HSP20 PF00011.21 BAJ51407.1 - 8.4e-06 25.9 0.0 1.4e-05 25.2 0.0 1.4 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 BAJ51407.1 - 0.00014 21.4 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA DNA_ligase_A_M PF01068.21 BAJ51408.1 - 2.9e-49 167.5 0.0 6.6e-49 166.3 0.0 1.6 2 0 0 2 2 2 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 BAJ51408.1 - 2.8e-18 66.9 0.2 1.3e-10 41.9 0.2 2.4 1 1 1 2 2 2 2 DNA ligase N terminus DNA_ligase_A_C PF04679.15 BAJ51408.1 - 2.5e-14 53.6 0.0 9.3e-14 51.8 0.0 2.1 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region HTH_15 PF12324.8 BAJ51408.1 - 0.0077 16.2 0.6 0.056 13.4 0.1 2.7 3 0 0 3 3 3 1 Helix-turn-helix domain of alkylmercury lyase mRNA_cap_enzyme PF01331.19 BAJ51408.1 - 0.014 15.2 0.0 0.097 12.5 0.0 2.2 1 1 0 1 1 1 0 mRNA capping enzyme, catalytic domain tRNA_bind PF01588.20 BAJ51410.1 - 3e-21 75.3 0.0 3.5e-21 75.1 0.0 1.1 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_2 PF00152.20 BAJ51411.1 - 2.2e-84 283.2 0.0 2.8e-84 282.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 BAJ51411.1 - 9.6e-13 47.9 0.1 2.3e-12 46.7 0.1 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 BAJ51411.1 - 0.002 17.6 0.1 0.27 10.7 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Methyltransf_25 PF13649.6 BAJ51412.1 - 6.5e-12 46.0 0.0 1.4e-11 44.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAJ51412.1 - 2.1e-11 43.8 0.0 2.7e-11 43.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 BAJ51412.1 - 3.1e-10 39.9 0.0 1.3e-09 37.8 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 BAJ51412.1 - 5e-10 39.9 0.0 1.5e-09 38.4 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAJ51412.1 - 8.9e-09 36.0 0.0 1.8e-08 35.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 BAJ51412.1 - 1.8e-05 24.5 0.0 3.1e-05 23.7 0.0 1.4 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.6 BAJ51412.1 - 3.3e-05 23.8 0.0 4.5e-05 23.3 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 BAJ51412.1 - 0.00051 19.5 0.0 0.0007 19.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 BAJ51412.1 - 0.00075 19.0 0.0 0.0014 18.1 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase TPMT PF05724.11 BAJ51412.1 - 0.00084 19.1 0.0 0.0012 18.5 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) UPF0146 PF03686.13 BAJ51412.1 - 0.0031 17.4 0.0 0.005 16.7 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) N6-adenineMlase PF10237.9 BAJ51412.1 - 0.0035 17.2 0.0 0.015 15.1 0.0 1.8 1 1 1 2 2 2 1 Probable N6-adenine methyltransferase Ubie_methyltran PF01209.18 BAJ51412.1 - 0.0094 15.3 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_5 PF01795.19 BAJ51412.1 - 0.013 15.0 0.1 0.022 14.2 0.0 1.4 2 0 0 2 2 2 0 MraW methylase family MetW PF07021.12 BAJ51412.1 - 0.026 14.1 0.0 0.034 13.7 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW NodS PF05401.11 BAJ51412.1 - 0.051 13.2 0.0 0.086 12.4 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_18 PF12847.7 BAJ51412.1 - 0.061 13.3 0.1 0.46 10.4 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain N6_N4_Mtase PF01555.18 BAJ51412.1 - 0.097 12.4 0.2 0.34 10.6 0.0 1.9 2 1 0 2 2 2 0 DNA methylase Carbam_trans_C PF16861.5 BAJ51412.1 - 0.13 11.9 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Carbamoyltransferase C-terminus N6_Mtase PF02384.16 BAJ51412.1 - 0.13 11.5 0.0 0.54 9.5 0.0 1.8 1 1 0 1 1 1 0 N-6 DNA Methylase AA_permease_2 PF13520.6 BAJ51413.1 - 1.6e-33 116.2 43.0 2.8e-33 115.4 42.7 1.4 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 BAJ51413.1 - 2.4e-22 79.2 37.9 2.4e-22 79.2 37.9 1.6 1 1 1 2 2 2 1 Amino acid permease COX7a PF02238.15 BAJ51413.1 - 0.08 13.4 0.9 1.1 9.7 0.8 3.2 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII AsnC_trans_reg PF01037.21 BAJ51414.1 - 6.1e-19 67.8 0.5 7e-19 67.6 0.5 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain CNOT1_HEAT PF16418.5 BAJ51414.1 - 0.11 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat Spore_YhcN_YlaJ PF09580.10 BAJ51414.1 - 0.12 12.4 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) MoeA_N PF03453.17 BAJ51415.1 - 4.5e-37 127.2 0.0 6.8e-37 126.7 0.0 1.3 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 BAJ51415.1 - 4.8e-13 49.0 0.0 8.7e-13 48.2 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 BAJ51415.1 - 0.00013 22.0 0.0 0.00063 19.9 0.0 2.2 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) XdhC_C PF13478.6 BAJ51416.1 - 2.3e-30 105.7 0.0 3.3e-30 105.2 0.0 1.2 1 0 0 1 1 1 1 XdhC Rossmann domain XdhC_CoxI PF02625.16 BAJ51416.1 - 3.5e-16 59.1 0.0 6.5e-16 58.3 0.0 1.4 1 0 0 1 1 1 1 XdhC and CoxI family OTCace PF00185.24 BAJ51416.1 - 0.032 14.3 0.0 0.063 13.3 0.0 1.4 1 0 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 2-Hacid_dh_C PF02826.19 BAJ51416.1 - 0.066 12.6 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VWA_CoxE PF05762.14 BAJ51417.1 - 1.4e-48 165.2 0.1 2e-48 164.7 0.1 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.28 BAJ51417.1 - 0.022 15.0 0.0 0.04 14.2 0.0 1.4 1 0 0 1 1 1 0 von Willebrand factor type A domain TetR_C_32 PF09209.11 BAJ51417.1 - 0.035 14.1 0.1 0.073 13.1 0.1 1.6 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain NAD_binding_6 PF08030.12 BAJ51417.1 - 0.062 13.4 0.0 4.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Ferric reductase NAD binding domain AAA_5 PF07728.14 BAJ51418.1 - 3.7e-13 49.7 0.0 6.9e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 BAJ51418.1 - 1.5e-10 41.6 0.0 3.7e-10 40.3 0.0 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 BAJ51418.1 - 3.7e-09 36.5 0.0 0.0013 18.5 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAJ51418.1 - 1.1e-06 29.2 0.0 3.3e-06 27.6 0.0 1.8 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 BAJ51418.1 - 1.2e-05 25.5 0.0 6.7e-05 23.2 0.0 2.1 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.12 BAJ51418.1 - 2.6e-05 24.0 0.1 0.12 12.1 0.0 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 BAJ51418.1 - 0.00066 20.2 0.0 0.0016 19.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 BAJ51418.1 - 0.00085 19.1 0.0 0.2 11.3 0.0 2.2 2 0 0 2 2 2 1 Sigma-54 interaction domain RNA_helicase PF00910.22 BAJ51418.1 - 0.0022 18.4 0.0 0.022 15.1 0.0 2.1 1 1 0 1 1 1 1 RNA helicase Rad17 PF03215.15 BAJ51418.1 - 0.0034 17.3 0.1 0.0093 15.9 0.0 1.7 2 0 0 2 2 2 1 Rad17 P-loop domain NACHT PF05729.12 BAJ51418.1 - 0.0043 17.0 0.4 0.016 15.1 0.4 2.0 1 1 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 BAJ51418.1 - 0.013 16.0 0.1 0.047 14.2 0.0 2.4 2 1 0 2 2 1 0 ABC transporter Sigma54_activ_2 PF14532.6 BAJ51418.1 - 0.014 15.5 0.0 0.058 13.5 0.0 2.0 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_2 PF07724.14 BAJ51418.1 - 0.015 15.5 0.0 0.051 13.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_6 PF12774.7 BAJ51418.1 - 0.018 14.0 0.0 0.028 13.4 0.0 1.2 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Mg_chelatase PF01078.21 BAJ51418.1 - 0.025 14.0 0.0 0.046 13.1 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 BAJ51418.1 - 0.042 13.9 0.0 0.27 11.3 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 BAJ51418.1 - 0.08 13.3 0.0 0.41 11.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_11 PF13086.6 BAJ51418.1 - 0.09 12.5 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain HHH_3 PF12836.7 BAJ51418.1 - 0.13 12.5 0.1 0.31 11.3 0.1 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix motif Zeta_toxin PF06414.12 BAJ51418.1 - 0.13 11.5 0.0 0.25 10.6 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_7 PF12775.7 BAJ51418.1 - 0.18 11.3 0.0 0.27 10.7 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region MCM PF00493.23 BAJ51418.1 - 0.18 10.9 0.0 22 4.0 0.0 2.9 3 0 0 3 3 3 0 MCM P-loop domain FAD_binding_5 PF00941.21 BAJ51419.1 - 1.1e-45 155.4 0.1 2.3e-45 154.4 0.0 1.5 2 0 0 2 2 2 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 BAJ51419.1 - 1.8e-26 92.3 2.0 2.3e-26 91.9 0.9 1.8 2 0 0 2 2 2 1 CO dehydrogenase flavoprotein C-terminal domain LPD7 PF18821.1 BAJ51419.1 - 0.076 13.1 0.1 0.15 12.2 0.1 1.5 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 7 Fer2_2 PF01799.20 BAJ51420.1 - 8.4e-32 109.0 1.3 2e-31 107.8 0.0 1.9 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 BAJ51420.1 - 0.00014 21.8 0.1 0.00014 21.8 0.1 2.1 2 1 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 BAJ51420.1 - 0.13 12.3 0.1 0.25 11.4 0.1 1.6 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF5634_N PF18672.1 BAJ51420.1 - 0.15 11.9 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5634) COXG PF06240.13 BAJ51421.1 - 1.6e-33 115.4 0.1 1.8e-33 115.2 0.1 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) Polyketide_cyc2 PF10604.9 BAJ51421.1 - 2.1e-12 47.5 0.0 2.4e-12 47.3 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.11 BAJ51421.1 - 0.00018 21.7 0.0 0.00027 21.2 0.0 1.4 1 1 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc PF03364.20 BAJ51421.1 - 0.0015 18.7 0.0 0.0022 18.2 0.0 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF1997 PF09366.10 BAJ51421.1 - 0.042 14.0 0.0 0.29 11.3 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1997) GTP_EFTU PF00009.27 BAJ51422.1 - 4.5e-59 199.3 0.0 6.8e-59 198.7 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 BAJ51422.1 - 2.2e-24 85.6 0.1 8.6e-24 83.6 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 BAJ51422.1 - 1.3e-21 76.4 0.0 3.6e-21 75.0 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 BAJ51422.1 - 9.1e-21 73.7 0.1 5.8e-20 71.2 0.0 2.4 3 0 0 3 3 3 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 BAJ51422.1 - 9.1e-12 45.2 2.1 2.4e-11 43.9 2.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAJ51422.1 - 0.0025 17.9 0.1 0.0085 16.2 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase Ras PF00071.22 BAJ51422.1 - 0.03 13.9 0.0 0.059 13.0 0.0 1.4 1 0 0 1 1 1 0 Ras family ADAM_spacer1 PF05986.14 BAJ51422.1 - 0.14 12.2 0.0 0.37 10.9 0.0 1.7 1 0 0 1 1 1 0 ADAM-TS Spacer 1 Nup54 PF13874.6 BAJ51423.1 - 0.0014 18.8 36.3 0.037 14.1 18.4 2.5 2 1 0 2 2 2 2 Nucleoporin complex subunit 54 ZapB PF06005.12 BAJ51423.1 - 0.028 14.8 4.0 0.028 14.8 4.0 5.5 2 2 2 4 4 4 0 Cell division protein ZapB Spc7 PF08317.11 BAJ51423.1 - 0.1 11.5 43.6 0.072 12.0 18.2 2.3 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF1298 PF06974.13 BAJ51423.1 - 0.12 12.3 0.5 0.35 10.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1298) DUF948 PF06103.11 BAJ51423.1 - 0.12 12.6 5.8 2.3 8.5 0.7 3.2 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 BAJ51423.1 - 0.14 12.2 14.6 1.2 9.2 2.1 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 BAJ51423.1 - 0.31 11.1 24.0 1.7 8.6 6.6 3.5 1 1 2 3 3 3 0 Laminin Domain II Bacillus_HBL PF05791.11 BAJ51423.1 - 0.45 10.3 11.2 2.3 8.0 2.9 2.5 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) MAD PF05557.13 BAJ51423.1 - 0.59 8.4 49.2 0.003 16.0 33.9 2.0 1 1 1 2 2 2 0 Mitotic checkpoint protein Mod_r PF07200.13 BAJ51423.1 - 0.84 9.7 37.5 0.075 13.1 11.1 3.6 1 1 1 3 3 3 0 Modifier of rudimentary (Mod(r)) protein ATG16 PF08614.11 BAJ51423.1 - 1.1 9.5 40.1 0.16 12.2 14.1 3.0 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) GAS PF13851.6 BAJ51423.1 - 1.1 8.6 50.9 0.44 9.9 16.6 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Atg14 PF10186.9 BAJ51423.1 - 1.4 7.9 38.5 3 6.9 15.9 2.3 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 BAJ51423.1 - 2.2 8.5 24.9 0.49 10.6 5.6 3.2 1 1 1 3 3 3 0 Fibrinogen alpha/beta chain family DUF695 PF05117.12 BAJ51423.1 - 3 8.0 6.3 11 6.2 0.1 3.4 2 1 1 3 3 3 0 Family of unknown function (DUF695) DUF2730 PF10805.8 BAJ51423.1 - 4 7.6 13.3 1.1 9.3 4.0 3.1 2 2 0 2 2 2 0 Protein of unknown function (DUF2730) TPR_MLP1_2 PF07926.12 BAJ51423.1 - 4.3 7.4 44.5 28 4.8 23.2 3.7 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF4665 PF15679.5 BAJ51423.1 - 6.1 7.5 26.3 0.18 12.4 1.6 4.2 2 2 1 4 4 4 0 Domain of unknown function (DUF4665) DUF2400 PF09674.10 BAJ51423.1 - 7.1 6.6 9.7 4.1 7.4 1.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2400) Fez1 PF06818.15 BAJ51423.1 - 7.3 7.0 41.7 2.9 8.3 19.2 2.2 1 1 1 2 2 2 0 Fez1 AATF-Che1 PF13339.6 BAJ51423.1 - 9.8 6.9 28.7 3.5 8.3 6.9 3.5 2 2 1 3 3 3 0 Apoptosis antagonizing transcription factor YabA PF06156.13 BAJ51423.1 - 10 6.9 35.6 0.68 10.6 5.9 4.6 1 1 4 5 5 5 0 Initiation control protein YabA ATP_bind_1 PF03029.17 BAJ51424.1 - 1.5e-52 178.8 0.0 1.7e-52 178.6 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_16 PF13191.6 BAJ51424.1 - 0.0033 17.8 0.0 0.0045 17.4 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain SRP54 PF00448.22 BAJ51424.1 - 0.0064 16.1 0.0 1.5 8.4 0.0 2.2 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain MMR_HSR1 PF01926.23 BAJ51424.1 - 0.0066 16.5 0.1 0.065 13.3 0.1 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 BAJ51424.1 - 0.015 15.6 0.0 0.085 13.1 0.0 2.2 2 1 0 2 2 2 0 AAA domain CLP1_P PF16575.5 BAJ51424.1 - 0.02 14.7 0.0 1.9 8.2 0.0 2.3 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop MeaB PF03308.16 BAJ51424.1 - 0.024 13.6 0.1 0.088 11.8 0.0 1.9 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ArsA_ATPase PF02374.15 BAJ51424.1 - 0.061 12.5 0.0 0.089 12.0 0.0 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase AAA_18 PF13238.6 BAJ51424.1 - 0.068 13.7 0.0 0.11 13.0 0.0 1.4 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 BAJ51424.1 - 0.1 12.5 0.0 3.2 7.6 0.0 2.9 3 1 0 3 3 3 0 RsgA GTPase AAA_30 PF13604.6 BAJ51424.1 - 0.1 12.3 0.1 0.26 11.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAJ51424.1 - 0.11 12.4 0.1 0.26 11.2 0.1 1.9 1 1 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 BAJ51424.1 - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 BAJ51424.1 - 0.16 12.5 0.0 0.22 12.0 0.0 1.5 1 1 0 1 1 1 0 ABC transporter Amidase PF01425.21 BAJ51425.1 - 4e-101 339.2 0.0 5.2e-101 338.8 0.0 1.1 1 0 0 1 1 1 1 Amidase PIN_5 PF08745.11 BAJ51425.1 - 0.11 11.9 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 PINc domain ribonuclease Proteasome PF00227.26 BAJ51426.1 - 2.6e-49 167.3 0.0 3.2e-49 167.0 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 BAJ51426.1 - 2.3e-13 49.6 0.7 7.4e-13 47.9 0.2 2.1 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature SBDS PF01172.18 BAJ51427.1 - 3.4e-21 75.1 0.1 5.7e-21 74.4 0.1 1.4 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 BAJ51427.1 - 5.1e-19 68.4 0.0 8.2e-19 67.7 0.0 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 BAJ51427.1 - 0.0035 17.4 0.0 0.0077 16.3 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G C-terminus ECR1_N PF14382.6 BAJ51428.1 - 1.7e-08 34.1 0.0 3.4e-08 33.2 0.0 1.5 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region KH_1 PF00013.29 BAJ51428.1 - 2.9e-06 27.0 0.0 6.7e-06 25.8 0.0 1.7 1 1 0 1 1 1 1 KH domain KH_6 PF15985.5 BAJ51428.1 - 0.00045 20.5 0.3 0.0012 19.2 0.2 1.8 2 0 0 2 2 2 1 KH domain KH_2 PF07650.17 BAJ51428.1 - 0.0011 18.7 0.3 0.0033 17.2 0.3 1.8 1 0 0 1 1 1 1 KH domain S1 PF00575.23 BAJ51428.1 - 0.0049 17.2 0.1 0.024 14.9 0.1 2.1 2 0 0 2 2 2 1 S1 RNA binding domain DUF1953 PF09196.10 BAJ51428.1 - 0.034 14.0 0.3 0.21 11.4 0.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF1953) KH_4 PF13083.6 BAJ51428.1 - 0.066 13.1 0.4 0.17 11.8 0.1 1.8 2 0 0 2 2 2 0 KH domain RNase_PH PF01138.21 BAJ51429.1 - 4.5e-33 114.5 0.0 6.2e-33 114.1 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 BAJ51429.1 - 1.1e-15 57.3 0.2 2.2e-15 56.5 0.2 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 DUF4862 PF16154.5 BAJ51429.1 - 0.045 13.1 0.0 0.064 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4862) RNase_PH PF01138.21 BAJ51430.1 - 1.5e-30 106.4 0.0 2e-30 106.0 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 BAJ51430.1 - 4.8e-07 29.7 0.1 9.4e-07 28.8 0.1 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 DUF1421 PF07223.11 BAJ51430.1 - 0.053 13.4 0.0 0.15 12.0 0.0 1.7 1 0 0 1 1 1 0 UBA-like domain (DUF1421) Ribosomal_L37ae PF01780.19 BAJ51431.1 - 1.6e-20 73.0 4.8 1.7e-20 72.9 4.8 1.1 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 BAJ51431.1 - 7.1e-05 22.7 3.3 9e-05 22.4 3.3 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 BAJ51431.1 - 0.00011 22.0 0.9 0.00013 21.8 0.9 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 BAJ51431.1 - 0.0057 16.7 0.8 0.37 11.0 0.1 2.2 2 0 0 2 2 2 1 Zinc ribbon domain zf-RING_13 PF17977.1 BAJ51431.1 - 0.012 15.7 1.2 0.018 15.2 1.2 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Rubredoxin_2 PF18073.1 BAJ51431.1 - 0.021 14.5 4.2 0.93 9.3 0.8 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain RNA_POL_M_15KD PF02150.16 BAJ51431.1 - 0.023 14.6 1.7 0.43 10.5 0.2 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf_UBZ PF18439.1 BAJ51431.1 - 0.069 12.8 1.1 2.6 7.7 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-C2H2_11 PF16622.5 BAJ51431.1 - 0.078 12.8 3.1 0.1 12.4 0.3 2.1 2 0 0 2 2 2 0 zinc-finger C2H2-type TF_Zn_Ribbon PF08271.12 BAJ51431.1 - 0.079 12.5 0.2 0.71 9.4 0.0 2.0 2 0 0 2 2 2 0 TFIIB zinc-binding zf-RanBP PF00641.18 BAJ51431.1 - 0.13 11.6 4.2 3.9 6.9 0.4 2.2 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-RRN7 PF11781.8 BAJ51431.1 - 1.9 8.3 7.3 7.7 6.3 7.3 1.8 1 1 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zn-ribbon_14 PF16503.5 BAJ51431.1 - 5.7 6.5 6.1 6.3 6.4 1.1 2.2 2 0 0 2 2 2 0 Zinc-ribbon Pcc1 PF09341.10 BAJ51432.1 - 1.1e-11 44.7 0.4 1.2e-11 44.5 0.4 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 Prefoldin_2 PF01920.20 BAJ51433.1 - 8.9e-23 80.3 12.9 1e-22 80.1 12.9 1.0 1 0 0 1 1 1 1 Prefoldin subunit FlaC_arch PF05377.11 BAJ51433.1 - 0.044 14.2 10.1 0.21 12.0 1.4 2.3 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) APG6_N PF17675.1 BAJ51433.1 - 0.094 13.2 14.5 1.1 9.7 2.5 2.0 2 0 0 2 2 2 0 Apg6 coiled-coil region DUF2408 PF10303.9 BAJ51433.1 - 0.17 12.5 6.4 0.36 11.4 6.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) DUF724 PF05266.14 BAJ51433.1 - 0.18 11.6 6.9 0.26 11.1 6.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) XhlA PF10779.9 BAJ51433.1 - 0.22 11.8 6.6 0.091 13.0 1.4 2.2 2 0 0 2 2 2 0 Haemolysin XhlA FUSC PF04632.12 BAJ51433.1 - 1.5 7.3 4.6 1.6 7.1 4.6 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Vir_act_alpha_C PF10400.9 BAJ51433.1 - 2 9.2 8.8 0.62 10.8 2.7 2.5 1 1 1 2 2 2 0 Virulence activator alpha C-term Halogen_Hydrol PF10112.9 BAJ51433.1 - 2.1 8.3 8.0 0.15 12.0 0.7 1.9 1 1 1 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Spc24 PF08286.11 BAJ51433.1 - 4.8 7.5 11.3 7e+02 0.5 11.2 2.2 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 YabA PF06156.13 BAJ51433.1 - 5.1 7.8 9.8 16 6.2 4.2 2.2 1 1 1 2 2 2 0 Initiation control protein YabA LMBR1 PF04791.16 BAJ51433.1 - 6.5 5.5 4.8 7.2 5.4 4.8 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DHH PF01368.20 BAJ51434.1 - 5.9e-12 45.7 0.1 9.1e-12 45.1 0.1 1.3 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.19 BAJ51434.1 - 0.00067 20.1 0.6 0.0037 17.7 0.2 2.3 3 0 0 3 3 3 1 DHHA1 domain ABC_tran PF00005.27 BAJ51435.1 - 7e-29 101.1 0.0 1e-28 100.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51435.1 - 2.5e-10 40.6 1.2 1.7e-05 24.8 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ51435.1 - 4.9e-07 29.4 0.2 2.3e-06 27.2 0.2 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 BAJ51435.1 - 0.00032 20.3 0.0 0.058 13.0 0.0 2.9 3 0 0 3 3 3 1 AAA domain AAA_29 PF13555.6 BAJ51435.1 - 0.00082 19.1 0.0 0.0016 18.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 BAJ51435.1 - 0.0017 18.8 0.4 0.0027 18.1 0.3 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 BAJ51435.1 - 0.0027 18.0 0.1 0.0066 16.7 0.1 1.8 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 BAJ51435.1 - 0.0031 17.5 0.0 0.0063 16.4 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase Mg_chelatase PF01078.21 BAJ51435.1 - 0.006 16.0 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_23 PF13476.6 BAJ51435.1 - 0.011 16.2 0.0 0.02 15.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 BAJ51435.1 - 0.028 14.6 0.0 0.37 11.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 BAJ51435.1 - 0.037 13.6 0.0 0.068 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 BAJ51435.1 - 0.041 14.3 0.8 10 6.5 0.1 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 BAJ51435.1 - 0.11 12.2 0.0 0.17 11.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 BAJ51435.1 - 0.13 12.2 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_5 PF07728.14 BAJ51435.1 - 0.15 12.0 0.2 1.8 8.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 BAJ51436.1 - 3.4e-27 95.6 0.0 5.8e-27 94.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51436.1 - 1.8e-08 34.6 0.1 0.0037 17.1 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ51436.1 - 2.2e-06 27.3 0.1 4.3e-05 23.1 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAJ51436.1 - 2.3e-05 25.0 0.0 3.9e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 BAJ51436.1 - 5.7e-05 22.8 0.0 0.00013 21.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 BAJ51436.1 - 0.00044 20.1 0.0 0.0031 17.3 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 BAJ51436.1 - 0.001 18.8 0.0 0.0029 17.3 0.0 1.7 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 BAJ51436.1 - 0.0013 18.7 0.1 0.0023 17.9 0.1 1.5 1 0 0 1 1 1 1 NACHT domain AAA_16 PF13191.6 BAJ51436.1 - 0.0014 19.0 0.1 0.0023 18.4 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain SRP54 PF00448.22 BAJ51436.1 - 0.0021 17.7 0.1 0.0059 16.3 0.0 1.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain DLIC PF05783.11 BAJ51436.1 - 0.0024 16.8 0.1 0.0035 16.2 0.1 1.1 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) NTPase_1 PF03266.15 BAJ51436.1 - 0.003 17.5 0.9 0.08 12.9 0.2 2.2 2 0 0 2 2 2 1 NTPase Mg_chelatase PF01078.21 BAJ51436.1 - 0.012 15.0 0.0 0.025 14.0 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Gag_p17 PF00540.18 BAJ51436.1 - 0.025 14.5 0.0 0.06 13.3 0.0 1.6 1 0 0 1 1 1 0 gag gene protein p17 (matrix protein) AAA_24 PF13479.6 BAJ51436.1 - 0.029 14.1 0.0 0.057 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 BAJ51436.1 - 0.032 14.5 0.0 0.083 13.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 BAJ51436.1 - 0.038 14.3 0.0 0.18 12.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 BAJ51436.1 - 0.041 13.1 0.3 0.1 11.8 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain DUF3584 PF12128.8 BAJ51436.1 - 0.047 11.2 0.1 0.062 10.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) TsaE PF02367.17 BAJ51436.1 - 0.056 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 BAJ51436.1 - 0.077 12.6 0.1 0.15 11.7 0.1 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 BAJ51436.1 - 0.08 12.9 0.8 0.19 11.6 0.2 1.9 2 1 0 2 2 2 0 RsgA GTPase PduV-EutP PF10662.9 BAJ51436.1 - 0.086 12.6 0.1 0.2 11.4 0.1 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_5 PF07728.14 BAJ51436.1 - 0.092 12.8 0.2 0.31 11.0 0.1 1.9 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 BAJ51436.1 - 0.095 13.2 0.1 0.24 11.9 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 BAJ51436.1 - 0.1 12.1 0.0 0.28 10.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 BAJ51436.1 - 0.13 12.1 0.0 0.23 11.4 0.0 1.5 2 0 0 2 2 1 0 ATPase domain predominantly from Archaea CbiQ PF02361.16 BAJ51437.1 - 9.7e-33 113.6 10.8 9.7e-33 113.6 10.8 1.4 2 0 0 2 2 2 1 Cobalt transport protein TBP PF00352.21 BAJ51438.1 - 6.1e-59 195.9 0.2 7.7e-29 99.5 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 BAJ51438.1 - 4e-08 33.3 0.1 0.012 15.7 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) PAS_11 PF14598.6 BAJ51438.1 - 0.00015 21.8 0.0 0.019 15.1 0.0 2.1 2 0 0 2 2 2 2 PAS domain DUF4061 PF13270.6 BAJ51438.1 - 0.026 14.8 0.0 5.1 7.5 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4061) BPL_LplA_LipB PF03099.19 BAJ51439.1 - 4.8e-11 42.7 0.0 7.2e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Pyr_redox_2 PF07992.14 BAJ51440.1 - 3.6e-61 207.0 4.6 3.6e-61 207.0 4.6 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 BAJ51440.1 - 5e-32 110.4 1.9 7.5e-32 109.9 0.8 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 BAJ51440.1 - 1.3e-22 80.1 8.6 1.1e-20 73.9 0.6 3.4 3 1 1 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 BAJ51440.1 - 2.9e-17 62.9 0.0 4.2e-17 62.4 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 BAJ51440.1 - 2.7e-09 36.6 7.4 4.8e-09 35.8 3.0 2.6 3 0 0 3 3 3 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 BAJ51440.1 - 7.5e-08 32.5 2.7 2.1e-05 24.7 0.1 2.8 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 BAJ51440.1 - 3.2e-07 30.1 2.4 3.2e-07 30.1 2.4 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 BAJ51440.1 - 7.1e-07 28.6 8.3 2.6e-05 23.5 0.4 3.8 4 0 0 4 4 4 1 FAD binding domain FAD_binding_3 PF01494.19 BAJ51440.1 - 9.3e-06 25.1 6.5 0.00012 21.4 0.2 2.6 2 1 0 2 2 2 2 FAD binding domain DAO PF01266.24 BAJ51440.1 - 2.9e-05 23.8 15.8 0.0028 17.3 1.4 4.2 3 1 1 4 4 4 2 FAD dependent oxidoreductase HI0933_like PF03486.14 BAJ51440.1 - 0.00039 19.2 7.5 0.02 13.6 0.2 3.9 4 0 0 4 4 4 1 HI0933-like protein NAD_binding_7 PF13241.6 BAJ51440.1 - 0.0012 19.2 1.4 0.33 11.4 0.1 2.8 2 1 0 2 2 2 1 Putative NAD(P)-binding NAD_binding_9 PF13454.6 BAJ51440.1 - 0.038 14.0 5.0 0.73 9.8 0.1 3.4 3 0 0 3 3 3 0 FAD-NAD(P)-binding Trp_halogenase PF04820.14 BAJ51440.1 - 0.072 11.9 0.1 0.072 11.9 0.1 2.0 3 0 0 3 3 3 0 Tryptophan halogenase Thi4 PF01946.17 BAJ51440.1 - 0.26 10.5 6.9 0.043 13.1 0.7 2.8 4 1 0 4 4 4 0 Thi4 family Lycopene_cycl PF05834.12 BAJ51440.1 - 0.62 9.1 5.4 0.52 9.3 1.1 2.6 2 1 0 2 2 2 0 Lycopene cyclase protein Transket_pyr PF02779.24 BAJ51441.1 - 1.5e-50 171.4 0.0 2.2e-50 170.8 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 BAJ51441.1 - 1.3e-37 128.4 0.2 2.6e-37 127.5 0.0 1.5 2 0 0 2 2 2 1 Transketolase, C-terminal domain PFOR_II PF17147.4 BAJ51441.1 - 0.0011 19.2 0.0 0.0021 18.4 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Radical_SAM PF04055.21 BAJ51442.1 - 3.2e-12 47.2 0.1 4.5e-12 46.6 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily LIAS_N PF16881.5 BAJ51442.1 - 3e-07 30.8 0.0 4.3e-06 27.1 0.1 2.3 2 0 0 2 2 2 1 N-terminal domain of lipoyl synthase of Radical_SAM family DUF473 PF04322.12 BAJ51442.1 - 0.024 14.5 0.0 0.041 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF473) NUDIX PF00293.28 BAJ51443.1 - 7e-17 61.7 0.9 8.8e-17 61.4 0.9 1.1 1 0 0 1 1 1 1 NUDIX domain PipA PF07108.11 BAJ51443.1 - 0.2 11.2 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 PipA protein CarboxypepD_reg PF13620.6 BAJ51444.1 - 8.4e-19 67.6 21.5 5.6e-09 36.2 1.5 5.8 5 1 0 5 5 5 4 Carboxypeptidase regulatory-like domain Big_1 PF02369.16 BAJ51444.1 - 3.1e-12 46.3 17.5 0.0028 17.6 0.1 5.5 5 0 0 5 5 5 3 Bacterial Ig-like domain (group 1) CarbopepD_reg_2 PF13715.6 BAJ51444.1 - 2.3e-06 27.5 4.2 0.012 15.6 0.1 3.9 3 1 0 3 3 3 2 CarboxypepD_reg-like domain MG4 PF17789.1 BAJ51444.1 - 0.0001 22.4 4.8 1.2 9.3 0.1 5.0 5 0 0 5 5 5 2 Macroglobulin domain MG4 SdrD_B PF17210.3 BAJ51444.1 - 0.006 16.8 2.2 0.052 13.8 0.3 3.2 3 0 0 3 3 3 1 SdrD B-like domain bMG3 PF11974.8 BAJ51444.1 - 0.011 15.7 1.9 14 5.7 0.0 4.1 4 1 0 4 4 4 0 Bacterial alpha-2-macroglobulin MG3 domain Invasin_D3 PF09134.10 BAJ51444.1 - 0.025 14.9 15.9 1.3 9.4 2.0 5.3 5 1 1 6 6 6 0 Invasin, domain 3 FlgD_ig PF13860.6 BAJ51444.1 - 0.027 14.3 0.9 8.1 6.4 0.0 4.4 4 0 0 4 4 4 0 FlgD Ig-like domain SpaA PF17802.1 BAJ51444.1 - 0.033 14.5 3.0 0.37 11.2 0.2 3.1 4 0 0 4 4 4 0 Prealbumin-like fold domain Dioxygenase_C PF00775.21 BAJ51444.1 - 0.16 11.4 0.4 42 3.5 0.0 3.5 5 0 0 5 5 5 0 Dioxygenase PapC_N PF13954.6 BAJ51444.1 - 0.17 11.9 0.0 0.77 9.8 0.0 2.0 3 0 0 3 3 3 0 PapC N-terminal domain F420_ligase PF01996.16 BAJ51446.1 - 2.4e-61 207.2 0.4 2.9e-61 206.9 0.4 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Mrr_cat PF04471.12 BAJ51447.1 - 0.00051 20.1 0.0 0.00087 19.3 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease NERD PF08378.11 BAJ51447.1 - 0.006 17.0 0.0 0.025 15.0 0.0 1.8 2 0 0 2 2 2 1 Nuclease-related domain HIT PF01230.23 BAJ51448.1 - 3.6e-12 46.9 0.0 4.9e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 HIT domain CwfJ_C_1 PF04677.15 BAJ51448.1 - 1.4e-07 31.4 0.0 2.4e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 DcpS_C PF11969.8 BAJ51448.1 - 1.6e-07 31.8 0.0 2.2e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding Radical_SAM PF04055.21 BAJ51449.1 - 4.5e-21 75.9 0.1 1.3e-19 71.2 0.0 2.5 2 1 0 2 2 2 1 Radical SAM superfamily Wyosine_form PF08608.12 BAJ51449.1 - 6.7e-19 68.0 0.0 1.3e-18 67.1 0.0 1.5 1 0 0 1 1 1 1 Wyosine base formation Fer4_12 PF13353.6 BAJ51449.1 - 0.0031 17.8 0.2 0.11 12.8 0.2 2.3 1 1 0 1 1 1 1 4Fe-4S single cluster domain PfkB PF00294.24 BAJ51450.1 - 1.5e-13 50.7 0.1 9.5e-07 28.4 0.0 2.1 2 0 0 2 2 2 2 pfkB family carbohydrate kinase Carb_kinase PF01256.17 BAJ51450.1 - 0.065 12.7 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Carbohydrate kinase AdoMet_dc PF02675.15 BAJ51452.1 - 7.2e-35 119.5 0.0 9.2e-35 119.1 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase MoaE PF02391.17 BAJ51453.1 - 2.2e-22 79.4 0.1 2.7e-22 79.2 0.1 1.0 1 0 0 1 1 1 1 MoaE protein ThiS PF02597.20 BAJ51454.1 - 6.1e-20 71.6 0.0 7.3e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 ThiS family DUF2635 PF10948.8 BAJ51454.1 - 0.023 14.4 0.0 0.035 13.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2635) TGS PF02824.21 BAJ51454.1 - 0.024 14.7 0.0 4.4 7.4 0.0 2.2 2 0 0 2 2 2 0 TGS domain Lambda_tail_I PF06805.12 BAJ51454.1 - 0.041 14.2 0.0 0.045 14.1 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage lambda tail assembly protein I DUF4430 PF14478.6 BAJ51454.1 - 0.21 12.2 0.0 5.4 7.7 0.0 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4430) dUTPase PF00692.19 BAJ51455.1 - 7.7e-21 74.1 0.0 1e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 BAJ51455.1 - 5.2e-06 25.5 0.0 1.2e-05 24.3 0.0 1.5 1 1 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DUF3821 PF12863.7 BAJ51455.1 - 0.1 12.4 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3821) Lactamase_B_2 PF12706.7 BAJ51456.1 - 1.3e-18 67.3 0.1 1.7e-18 66.9 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 BAJ51456.1 - 5.1e-13 49.5 0.2 7e-11 42.5 0.0 2.8 2 1 1 3 3 3 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 BAJ51456.1 - 2.3e-05 24.4 0.2 4.6e-05 23.4 0.2 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain MoCF_biosynth PF00994.24 BAJ51457.1 - 1.2e-33 115.8 0.0 1.4e-33 115.6 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain Isochorismatase PF00857.20 BAJ51457.1 - 0.19 11.9 0.0 0.31 11.2 0.0 1.2 1 0 0 1 1 1 0 Isochorismatase family MoaC PF01967.21 BAJ51458.1 - 1.7e-42 144.7 2.0 1.9e-42 144.6 2.0 1.0 1 0 0 1 1 1 1 MoaC family Ribosomal_S11 PF00411.19 BAJ51459.1 - 1.9e-38 131.2 1.7 3.1e-38 130.6 1.7 1.3 1 0 0 1 1 1 1 Ribosomal protein S11 S4 PF01479.25 BAJ51460.1 - 1.8e-16 59.6 0.1 3.7e-16 58.6 0.1 1.6 1 0 0 1 1 1 1 S4 domain Ribosomal_S4 PF00163.19 BAJ51460.1 - 3.4e-06 27.9 1.5 5.2e-06 27.3 0.6 1.7 1 1 1 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain FAD_binding_3 PF01494.19 BAJ51461.1 - 1.9e-14 53.7 1.4 3.5e-05 23.2 0.1 3.0 3 0 0 3 3 3 3 FAD binding domain Pyr_redox_2 PF07992.14 BAJ51461.1 - 1.7e-10 40.7 0.2 2.9e-10 39.9 0.2 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 BAJ51461.1 - 9.7e-10 38.2 1.8 0.00034 20.0 0.2 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 BAJ51461.1 - 1e-09 38.5 0.4 0.00088 19.0 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 BAJ51461.1 - 1.7e-08 33.6 1.5 1e-05 24.4 0.3 2.3 2 0 0 2 2 2 2 HI0933-like protein Lycopene_cycl PF05834.12 BAJ51461.1 - 2.6e-07 30.1 1.0 0.00054 19.1 0.7 2.3 2 1 0 2 2 2 2 Lycopene cyclase protein Trp_halogenase PF04820.14 BAJ51461.1 - 7e-07 28.5 0.1 0.022 13.6 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase FAD_oxidored PF12831.7 BAJ51461.1 - 7.3e-07 28.9 3.1 7.3e-07 28.9 3.1 2.4 2 1 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 BAJ51461.1 - 6e-06 25.6 3.3 1.5e-05 24.3 3.3 1.8 1 1 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.17 BAJ51461.1 - 6.5e-05 22.3 0.4 0.00032 20.0 0.1 2.2 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 BAJ51461.1 - 0.0001 22.5 0.0 0.0001 22.5 0.0 2.2 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 BAJ51461.1 - 0.00012 21.3 0.7 0.00012 21.3 0.7 2.1 3 0 0 3 3 3 1 FAD binding domain NAD_binding_9 PF13454.6 BAJ51461.1 - 0.0032 17.5 0.3 0.93 9.5 0.0 2.5 2 0 0 2 2 2 1 FAD-NAD(P)-binding Pyr_redox PF00070.27 BAJ51461.1 - 0.004 17.7 0.9 0.025 15.1 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 BAJ51461.1 - 0.018 14.3 0.6 0.044 13.1 0.1 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain DUF896 PF05979.12 BAJ51461.1 - 0.11 12.4 0.0 0.62 10.0 0.0 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF896) Peptidase_M20 PF01546.28 BAJ51462.1 - 5.7e-35 120.9 0.0 2.1e-34 119.1 0.0 1.8 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 BAJ51462.1 - 3e-19 69.0 0.0 4.9e-19 68.3 0.0 1.3 1 0 0 1 1 1 1 Peptidase dimerisation domain Isochorismatase PF00857.20 BAJ51463.1 - 4.3e-40 137.7 0.0 4.7e-40 137.6 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family QRPTase_C PF01729.19 BAJ51464.1 - 6.4e-22 78.1 0.0 9.2e-22 77.6 0.0 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain NAPRTase_C PF17956.1 BAJ51464.1 - 0.00013 22.3 0.1 0.00046 20.6 0.0 1.8 1 1 0 1 1 1 1 Nicotinate phosphoribosyltransferase C-terminal domain QRPTase_N PF02749.16 BAJ51464.1 - 0.00019 21.5 0.0 0.0024 17.9 0.0 2.5 3 0 0 3 3 3 1 Quinolinate phosphoribosyl transferase, N-terminal domain BtpA PF03437.15 BAJ51464.1 - 0.1 12.0 0.0 0.43 10.0 0.0 1.9 2 0 0 2 2 2 0 BtpA family T_hemolysin PF12261.8 BAJ51464.1 - 0.22 11.3 0.0 0.43 10.3 0.0 1.5 1 0 0 1 1 1 0 Thermostable hemolysin Lyase_1 PF00206.20 BAJ51465.1 - 1.3e-104 350.0 0.0 1.6e-104 349.6 0.0 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 BAJ51465.1 - 3.5e-17 62.6 0.8 4.4e-16 59.0 0.7 2.5 2 0 0 2 2 2 1 Fumarase C C-terminus Fe-ADH_2 PF13685.6 BAJ51466.1 - 1.5e-59 201.7 0.4 2.2e-59 201.2 0.2 1.3 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 BAJ51466.1 - 9.3e-20 70.7 0.8 1.2e-18 67.1 0.8 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 BAJ51466.1 - 1.5e-05 24.3 0.2 0.00029 20.1 0.2 2.5 1 1 0 1 1 1 1 3-dehydroquinate synthase ThiP_synth PF10120.9 BAJ51467.1 - 5e-35 120.6 0.0 8.5e-35 119.8 0.0 1.3 1 0 0 1 1 1 1 Thiamine-phosphate synthase Cro PF09048.10 BAJ51467.1 - 0.00023 21.1 0.0 0.00053 20.0 0.0 1.5 1 0 0 1 1 1 1 Cro P22_Cro PF14549.6 BAJ51467.1 - 0.0013 18.6 0.3 0.0077 16.1 0.1 2.3 3 0 0 3 3 3 1 DNA-binding transcriptional regulator Cro HTH_3 PF01381.22 BAJ51467.1 - 0.0037 17.3 0.4 0.032 14.3 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix HTH_37 PF13744.6 BAJ51467.1 - 0.01 15.8 0.0 0.021 14.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_1 PF00126.27 BAJ51467.1 - 0.016 15.1 0.2 0.066 13.2 0.0 2.1 2 1 1 3 3 3 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_23 PF13384.6 BAJ51467.1 - 0.017 14.9 0.0 0.067 13.0 0.0 2.1 2 0 0 2 2 2 0 Homeodomain-like domain YdaS_antitoxin PF15943.5 BAJ51467.1 - 0.022 14.6 0.0 0.068 13.0 0.0 1.8 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Sigma70_r4 PF04545.16 BAJ51467.1 - 0.036 13.6 0.1 0.12 11.9 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 MarR_2 PF12802.7 BAJ51467.1 - 0.036 13.9 0.0 0.39 10.6 0.0 2.4 2 0 0 2 2 2 0 MarR family HNF-1_N PF04814.13 BAJ51467.1 - 0.21 12.2 0.0 0.33 11.5 0.0 1.2 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus HTH_3 PF01381.22 BAJ51468.1 - 5.9e-09 35.8 0.1 6.4e-08 32.5 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_23 PF13384.6 BAJ51468.1 - 4.1e-05 23.2 0.2 0.00073 19.3 0.1 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_31 PF13560.6 BAJ51468.1 - 6.6e-05 23.2 0.2 0.00012 22.3 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 BAJ51468.1 - 7.5e-05 22.2 0.8 0.00054 19.4 0.1 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_37 PF13744.6 BAJ51468.1 - 0.00013 21.8 0.1 0.00023 21.0 0.0 1.6 1 1 1 2 2 2 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 BAJ51468.1 - 0.00037 20.3 0.0 0.00072 19.4 0.0 1.4 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Cro PF09048.10 BAJ51468.1 - 0.00089 19.2 0.0 0.0016 18.5 0.0 1.5 1 0 0 1 1 1 1 Cro Sigma70_r4_2 PF08281.12 BAJ51468.1 - 0.0018 17.9 0.1 0.063 13.0 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 P22_Cro PF14549.6 BAJ51468.1 - 0.0025 17.6 0.2 0.0065 16.3 0.1 1.8 2 0 0 2 2 2 1 DNA-binding transcriptional regulator Cro HTH_40 PF14493.6 BAJ51468.1 - 0.0033 17.9 0.0 0.0077 16.7 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 BAJ51468.1 - 0.0077 16.2 0.2 0.02 14.9 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_38 PF13936.6 BAJ51468.1 - 0.0091 15.7 0.1 0.15 11.8 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain REV1_C PF16727.5 BAJ51468.1 - 0.016 15.6 0.2 0.031 14.7 0.2 1.6 1 1 0 1 1 1 0 DNA repair protein REV1 C-terminal domain KORA PF16509.5 BAJ51468.1 - 0.037 14.3 1.0 0.79 10.0 0.2 2.1 1 1 1 2 2 2 0 TrfB plasmid transcriptional repressor DUF3891 PF13030.6 BAJ51468.1 - 0.04 13.7 0.0 0.047 13.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3891) LacI PF00356.21 BAJ51468.1 - 0.059 13.2 1.3 0.16 11.8 0.1 2.3 2 1 0 2 2 2 0 Bacterial regulatory proteins, lacI family RepB PF07506.11 BAJ51468.1 - 0.059 13.4 0.0 0.088 12.9 0.0 1.3 1 1 0 1 1 1 0 RepB plasmid partitioning protein HTH_50 PF18024.1 BAJ51468.1 - 0.062 12.9 0.1 0.13 11.9 0.1 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain Cpn60_TCP1 PF00118.24 BAJ51468.1 - 0.065 11.8 0.0 0.073 11.7 0.0 1.0 1 0 0 1 1 1 0 TCP-1/cpn60 chaperonin family HTH_Tnp_1 PF01527.20 BAJ51468.1 - 0.13 12.6 0.5 0.3 11.4 0.2 1.7 1 1 1 2 2 2 0 Transposase HTH_28 PF13518.6 BAJ51468.1 - 0.13 12.4 0.6 4.2 7.6 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_1 PF00126.27 BAJ51468.1 - 0.15 12.1 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_10 PF04967.12 BAJ51468.1 - 0.15 11.9 0.0 0.34 10.8 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain tRNA_deacylase PF04414.12 BAJ51469.1 - 6.7e-54 182.5 0.0 8.3e-54 182.2 0.0 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase Cons_hypoth95 PF03602.15 BAJ51470.1 - 1e-07 31.8 0.0 1.5e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_30 PF05430.11 BAJ51470.1 - 1.2e-05 25.2 0.0 2e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Spermine_synth PF01564.17 BAJ51470.1 - 1.4e-05 24.6 0.0 1.9e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Methyltransf_25 PF13649.6 BAJ51470.1 - 3.3e-05 24.5 0.0 7.7e-05 23.3 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain MTS PF05175.14 BAJ51470.1 - 0.0002 21.0 0.0 0.00029 20.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 BAJ51470.1 - 0.0003 21.4 0.0 0.00074 20.1 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 BAJ51470.1 - 0.0024 18.8 0.0 0.0066 17.4 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 BAJ51470.1 - 0.0063 15.9 0.0 0.0088 15.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltrans_SAM PF10672.9 BAJ51470.1 - 0.008 15.4 0.0 0.017 14.3 0.0 1.5 1 1 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Ubie_methyltran PF01209.18 BAJ51470.1 - 0.018 14.4 0.0 0.15 11.4 0.0 2.3 2 1 1 3 3 3 0 ubiE/COQ5 methyltransferase family PCMT PF01135.19 BAJ51470.1 - 0.049 13.4 0.0 0.084 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF43 PF01861.16 BAJ51470.1 - 0.064 12.5 0.0 0.097 11.9 0.0 1.2 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain Methyltransf_23 PF13489.6 BAJ51470.1 - 0.096 12.5 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 BAJ51470.1 - 0.12 11.5 0.0 0.15 11.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase tRNA-synt_1f PF01921.18 BAJ51471.1 - 5.6e-100 334.8 0.0 7.5e-100 334.3 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA_anti-codon PF01336.25 BAJ51472.1 - 5.3e-06 26.3 0.0 7.2e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain PBP3 PF18056.1 BAJ51472.1 - 0.1 12.7 0.1 6 7.0 0.0 2.1 1 1 1 2 2 2 0 Penicillin Binding Protein 3 Domain NfeD PF01957.18 BAJ51473.1 - 1e-09 38.6 0.2 3.2e-09 37.0 0.2 1.9 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding CLP_protease PF00574.23 BAJ51473.1 - 1.2e-06 28.6 0.1 1.9e-06 27.9 0.1 1.3 1 0 0 1 1 1 1 Clp protease Band_7 PF01145.25 BAJ51474.1 - 6.2e-33 114.3 5.5 7.9e-33 113.9 5.5 1.1 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 BAJ51474.1 - 6.9e-05 22.6 0.2 0.00014 21.7 0.2 1.6 1 1 0 1 1 1 1 SPFH domain-Band 7 family Spc7 PF08317.11 BAJ51475.1 - 0.0058 15.5 15.7 0.0058 15.5 15.7 4.0 1 1 4 5 5 5 3 Spc7 kinetochore protein DUF948 PF06103.11 BAJ51475.1 - 0.0084 16.3 14.8 3.4 8.0 0.4 4.6 2 1 2 4 4 4 1 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 BAJ51475.1 - 0.015 15.4 18.1 2.6 8.1 0.1 4.9 2 1 3 5 5 5 0 Protein of unknown function (DUF1664) HALZ PF02183.18 BAJ51475.1 - 0.02 15.1 1.1 0.02 15.1 1.1 5.4 6 2 1 7 7 6 0 Homeobox associated leucine zipper Fez1 PF06818.15 BAJ51475.1 - 0.024 15.1 37.2 0.12 12.8 13.1 3.4 1 1 3 4 4 4 0 Fez1 Imm5 PF14423.6 BAJ51475.1 - 0.058 13.6 1.8 11 6.2 0.0 2.7 2 0 0 2 2 2 0 Immunity protein Imm5 APG17 PF04108.12 BAJ51475.1 - 0.06 12.4 29.0 0.19 10.8 3.3 4.2 2 1 1 4 4 4 0 Autophagy protein Apg17 WXG100 PF06013.12 BAJ51475.1 - 0.11 12.8 7.4 6.4 7.1 0.0 4.6 3 2 1 4 4 4 0 Proteins of 100 residues with WXG Sec34 PF04136.15 BAJ51475.1 - 0.14 12.1 26.3 0.47 10.3 1.9 5.1 2 1 3 5 5 5 0 Sec34-like family Exonuc_VII_L PF02601.15 BAJ51475.1 - 0.3 10.6 31.2 2.3 7.7 8.3 3.0 1 1 1 2 2 2 0 Exonuclease VII, large subunit DHR10 PF18595.1 BAJ51475.1 - 0.31 11.1 50.4 0.29 11.2 17.2 5.0 2 1 3 5 5 5 0 Designed helical repeat protein 10 domain MCPsignal PF00015.21 BAJ51475.1 - 0.39 10.5 6.5 7.5 6.3 3.4 2.9 1 1 2 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Rpr2 PF04032.16 BAJ51475.1 - 0.68 10.3 2.3 3.9 7.8 1.4 2.9 2 1 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF4407 PF14362.6 BAJ51475.1 - 0.94 8.8 19.7 1 8.6 12.6 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Cluap1 PF10234.9 BAJ51475.1 - 1.1 8.6 35.5 1.5 8.2 14.8 4.0 2 1 3 5 5 5 0 Clusterin-associated protein-1 DUF4446 PF14584.6 BAJ51475.1 - 1.5 8.8 23.1 0.12 12.4 0.6 4.9 2 1 3 5 5 5 0 Protein of unknown function (DUF4446) BLOC1_2 PF10046.9 BAJ51475.1 - 1.6 9.1 27.2 1.9 8.8 5.3 5.3 2 1 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ACP_PD PF04336.12 BAJ51475.1 - 2 8.9 13.1 16 6.0 0.0 4.9 3 2 2 5 5 5 0 Acyl carrier protein phosphodiesterase FliJ PF02050.16 BAJ51475.1 - 2 8.7 35.4 0.15 12.3 11.2 5.0 3 2 2 5 5 5 0 Flagellar FliJ protein NPV_P10 PF05531.12 BAJ51475.1 - 2 8.9 17.0 5.6 7.5 0.5 5.4 3 2 3 6 6 6 0 Nucleopolyhedrovirus P10 protein TPR_MLP1_2 PF07926.12 BAJ51475.1 - 2.5 8.2 45.3 3.7 7.6 1.5 4.6 2 1 0 3 3 3 0 TPR/MLP1/MLP2-like protein OmpH PF03938.14 BAJ51475.1 - 3.2 8.1 39.7 0.63 10.4 11.8 4.2 3 1 1 4 4 4 0 Outer membrane protein (OmpH-like) Snapin_Pallidin PF14712.6 BAJ51475.1 - 3.3 8.2 33.1 3.9 8.0 5.8 5.4 3 1 3 6 6 6 0 Snapin/Pallidin Seryl_tRNA_N PF02403.22 BAJ51475.1 - 3.4 7.9 36.4 0.054 13.7 6.4 4.9 3 1 2 5 5 5 0 Seryl-tRNA synthetase N-terminal domain EzrA PF06160.12 BAJ51475.1 - 3.5 5.7 40.8 8.6 4.4 1.5 4.0 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA Halogen_Hydrol PF10112.9 BAJ51475.1 - 5.8 6.9 14.7 2.7 8.0 2.7 3.7 1 1 1 3 3 3 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Flagellin_C PF00700.21 BAJ51475.1 - 7.2 7.0 7.6 2.4 8.6 0.1 3.6 4 0 0 4 4 3 0 Bacterial flagellin C-terminal helical region IpaC_SipC PF09599.10 BAJ51475.1 - 9.7 5.6 9.0 0.97 8.9 4.0 1.8 2 0 0 2 2 2 0 Salmonella-Shigella invasin protein C (IpaC_SipC) Hjc PF01870.18 BAJ51477.1 - 2.1e-17 62.9 0.0 6.8e-17 61.3 0.0 1.7 1 1 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) AHJR-like PF18743.1 BAJ51477.1 - 0.0044 16.6 0.0 0.0065 16.0 0.0 1.4 1 0 0 1 1 1 1 REase_AHJR-like zf-ribbon_3 PF13248.6 BAJ51477.1 - 0.021 14.2 0.1 0.031 13.7 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DUF1272 PF06906.11 BAJ51477.1 - 0.16 12.1 0.1 0.25 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) Zn_Tnp_IS1595 PF12760.7 BAJ51477.1 - 0.16 11.9 0.1 0.3 11.1 0.1 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain MmcB-like PF06319.12 BAJ51477.1 - 0.17 11.6 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 DNA repair protein MmcB-like HTH_AsnC-type PF13404.6 BAJ51478.1 - 8.4e-16 57.5 0.0 1.6e-15 56.6 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 BAJ51478.1 - 3.4e-15 55.3 0.0 1.1e-13 50.5 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 BAJ51478.1 - 1.4e-12 47.4 0.0 1.9e-12 46.9 0.0 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_20 PF12840.7 BAJ51478.1 - 2.3e-05 24.4 0.0 7.6e-05 22.7 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain TrmB PF01978.19 BAJ51478.1 - 6e-05 22.9 0.0 0.0034 17.2 0.0 2.4 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_DeoR PF08220.12 BAJ51478.1 - 7.3e-05 22.4 0.3 0.00035 20.3 0.0 2.1 3 0 0 3 3 2 1 DeoR-like helix-turn-helix domain HTH_5 PF01022.20 BAJ51478.1 - 7.8e-05 22.5 0.0 0.00077 19.3 0.0 2.5 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_Tnp_ISL3 PF13542.6 BAJ51478.1 - 0.00022 20.6 0.0 0.025 14.0 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 NapD PF03927.13 BAJ51478.1 - 0.0003 20.8 0.1 0.00047 20.2 0.1 1.2 1 0 0 1 1 1 1 NapD protein MarR_2 PF12802.7 BAJ51478.1 - 0.00038 20.3 0.0 0.011 15.5 0.0 2.3 2 0 0 2 2 2 1 MarR family AsnC_trans_reg2 PF17805.1 BAJ51478.1 - 0.00079 19.5 0.0 0.0012 19.0 0.0 1.3 1 0 0 1 1 1 1 AsnC-like ligand binding domain Sigma70_r4 PF04545.16 BAJ51478.1 - 0.0016 17.9 0.0 0.03 13.9 0.0 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_11 PF08279.12 BAJ51478.1 - 0.0023 17.9 1.1 0.0067 16.4 0.0 2.2 3 0 0 3 3 3 1 HTH domain MarR PF01047.22 BAJ51478.1 - 0.0027 17.6 0.1 0.049 13.6 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_38 PF13936.6 BAJ51478.1 - 0.0032 17.2 0.0 0.034 13.9 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 BAJ51478.1 - 0.0036 17.1 0.0 0.045 13.6 0.0 2.4 2 0 0 2 2 2 1 IclR helix-turn-helix domain Sigma70_r4_2 PF08281.12 BAJ51478.1 - 0.0048 16.5 0.0 0.012 15.3 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_36 PF13730.6 BAJ51478.1 - 0.0057 16.6 0.0 0.063 13.2 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 BAJ51478.1 - 0.0066 16.4 0.0 1.5 8.8 0.0 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain FeoC PF09012.10 BAJ51478.1 - 0.0069 16.4 0.0 0.072 13.2 0.0 2.2 2 1 0 2 2 2 1 FeoC like transcriptional regulator HTH_23 PF13384.6 BAJ51478.1 - 0.0071 16.1 0.0 0.029 14.2 0.0 2.0 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 BAJ51478.1 - 0.012 15.7 0.0 3.8 7.6 0.0 3.1 1 1 1 3 3 3 0 Winged helix-turn helix ACT_4 PF13291.6 BAJ51478.1 - 0.012 16.2 2.5 0.21 12.2 0.1 2.8 2 1 0 2 2 2 0 ACT domain TFIIE_alpha PF02002.17 BAJ51478.1 - 0.014 15.3 0.7 1.2 9.0 0.0 2.3 1 1 1 2 2 2 0 TFIIE alpha subunit HTH_Mga PF08280.11 BAJ51478.1 - 0.015 15.3 0.0 0.046 13.8 0.0 1.8 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain GerE PF00196.19 BAJ51478.1 - 0.022 14.3 0.0 0.097 12.2 0.0 2.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, luxR family Mga PF05043.13 BAJ51478.1 - 0.031 14.9 0.0 0.17 12.5 0.0 2.1 2 0 0 2 2 2 0 Mga helix-turn-helix domain CENP-B_N PF04218.13 BAJ51478.1 - 0.047 13.3 0.1 1.9 8.2 0.0 2.3 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain Myb_DNA-binding PF00249.31 BAJ51478.1 - 0.055 13.7 0.0 1.2 9.4 0.0 2.2 2 0 0 2 2 2 0 Myb-like DNA-binding domain FaeA PF04703.12 BAJ51478.1 - 0.06 13.7 0.0 0.17 12.3 0.0 1.7 1 0 0 1 1 1 0 FaeA-like protein Rrf2 PF02082.20 BAJ51478.1 - 0.073 13.4 0.1 1.4 9.3 0.0 2.5 2 1 1 3 3 3 0 Transcriptional regulator DUF4089 PF13318.6 BAJ51478.1 - 0.12 12.9 0.1 0.24 11.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4089) HTH_28 PF13518.6 BAJ51478.1 - 0.16 12.1 0.0 0.94 9.7 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain SHMT PF00464.19 BAJ51479.1 - 1.1e-35 123.0 0.0 3.3e-34 118.1 0.0 2.1 1 1 0 1 1 1 1 Serine hydroxymethyltransferase DegT_DnrJ_EryC1 PF01041.17 BAJ51479.1 - 0.00017 21.0 0.1 0.00031 20.2 0.1 1.4 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 BAJ51479.1 - 0.00038 19.1 0.0 0.00054 18.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 BAJ51479.1 - 0.00059 19.2 0.0 0.001 18.4 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 BAJ51479.1 - 0.0013 18.0 0.0 0.0027 16.9 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class I and II SelA PF03841.13 BAJ51479.1 - 0.0014 17.7 0.0 0.002 17.2 0.0 1.2 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.19 BAJ51479.1 - 0.006 15.6 0.1 0.009 15.0 0.1 1.2 1 0 0 1 1 1 1 Aminotransferase class-V PFOR_II PF17147.4 BAJ51479.1 - 0.096 13.0 0.0 0.28 11.5 0.0 1.8 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II MDD_C PF18376.1 BAJ51480.1 - 4.5e-07 29.8 0.0 7e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Mevalonate 5-diphosphate decarboxylase C-terminal domain GHMP_kinases_N PF00288.26 BAJ51480.1 - 0.0012 19.1 0.8 0.0021 18.2 0.8 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain MazE_antitoxin PF04014.18 BAJ51481.1 - 0.0054 16.6 0.1 0.0082 16.0 0.1 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin Polo_box_2 PF18531.1 BAJ51481.1 - 0.017 15.3 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 Polo box domain PrlF_antitoxin PF15937.5 BAJ51481.1 - 0.039 14.4 0.0 0.043 14.3 0.0 1.2 1 0 0 1 1 1 0 prlF antitoxin for toxin YhaV_toxin HTH_45 PF14947.6 BAJ51482.1 - 1.2e-29 102.1 1.2 1.4e-29 101.9 1.2 1.0 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 BAJ51482.1 - 0.00018 21.3 0.2 0.00024 20.9 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) TrmB PF01978.19 BAJ51482.1 - 0.0054 16.6 0.2 0.0074 16.2 0.2 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 BAJ51482.1 - 0.031 14.8 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain MASE3 PF17159.4 BAJ51483.1 - 0.0075 15.9 4.1 0.0075 15.9 4.1 2.1 1 1 1 2 2 2 2 Membrane-associated sensor domain TPP_enzyme_C PF02775.21 BAJ51485.1 - 1.4e-30 106.1 0.1 2.6e-30 105.2 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 BAJ51485.1 - 1.4e-16 60.3 0.3 2.3e-15 56.5 0.3 2.3 1 1 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal ATP13 PF12921.7 BAJ51485.1 - 0.063 13.1 0.0 0.21 11.4 0.0 1.8 2 0 0 2 2 2 0 Mitochondrial ATPase expression POR_N PF01855.19 BAJ51486.1 - 1.7e-60 204.7 0.0 2.5e-60 204.1 0.0 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 BAJ51486.1 - 9.2e-33 113.8 0.1 1.8e-32 112.8 0.1 1.5 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 BAJ51486.1 - 7e-09 35.9 0.0 1.8e-08 34.6 0.0 1.8 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 BAJ51486.1 - 5.1e-05 22.9 0.0 9.9e-05 22.0 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.20 BAJ51486.1 - 0.0074 16.2 0.0 0.018 14.9 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain HSP20 PF00011.21 BAJ51487.1 - 3.8e-13 49.5 3.8 9.7e-12 44.9 3.8 2.3 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 BAJ51487.1 - 3e-12 45.9 0.1 4.9e-12 45.2 0.1 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA GvpH PF05455.11 BAJ51487.1 - 0.00018 21.6 0.2 0.00027 21.1 0.2 1.2 1 0 0 1 1 1 1 GvpH FKBP26_C PF18046.1 BAJ51487.1 - 0.003 17.6 0.5 0.1 12.7 0.3 2.5 1 1 1 2 2 2 1 FKBP26_C-terminal PIH1_CS PF18201.1 BAJ51487.1 - 0.0038 17.6 0.4 0.0087 16.5 0.1 1.6 2 0 0 2 2 2 1 PIH1 CS-like domain CS PF04969.16 BAJ51487.1 - 0.0092 17.0 1.4 0.014 16.4 1.4 1.2 1 0 0 1 1 1 1 CS domain QIL1 PF15884.5 BAJ51487.1 - 0.077 13.6 0.7 11 6.7 0.1 2.3 2 0 0 2 2 2 0 MICOS complex subunit MIC13, QIL1 DUF2807 PF10988.8 BAJ51487.1 - 0.18 11.6 0.6 0.24 11.2 0.6 1.1 1 0 0 1 1 1 0 Putative auto-transporter adhesin, head GIN domain Glycos_transf_2 PF00535.26 BAJ51488.1 - 1.7e-24 86.5 0.0 2.7e-24 85.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 BAJ51488.1 - 4.5e-19 69.3 0.0 6.3e-19 68.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 BAJ51488.1 - 6.8e-13 48.5 0.1 1.6e-12 47.2 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 BAJ51488.1 - 1.5e-07 31.8 0.2 3.4e-07 30.7 0.2 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 BAJ51488.1 - 1.1e-05 25.0 0.0 1.9e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 BAJ51488.1 - 0.0048 16.8 4.3 0.0092 15.9 4.3 1.5 1 1 0 1 1 1 1 Glycosyl transferase family group 2 N6_N4_Mtase PF01555.18 BAJ51489.1 - 1.1e-06 28.5 0.0 0.00054 19.7 0.0 2.3 2 0 0 2 2 2 2 DNA methylase Methyltransf_11 PF08241.12 BAJ51489.1 - 0.00077 20.1 0.1 0.12 13.0 0.0 3.2 3 1 0 3 3 3 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAJ51489.1 - 0.044 14.5 0.0 13 6.5 0.0 3.1 3 0 0 3 3 3 0 Methyltransferase domain UPF0020 PF01170.18 BAJ51489.1 - 0.056 13.1 0.0 0.091 12.4 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 DJ-1_PfpI PF01965.24 BAJ51490.1 - 7.1e-56 188.5 0.0 8e-56 188.4 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family Catalase_C PF18011.1 BAJ51490.1 - 0.0013 18.4 0.0 0.002 17.8 0.0 1.4 1 1 0 1 1 1 1 C-terminal domain found in long catalases GATase PF00117.28 BAJ51490.1 - 0.0014 18.4 0.0 0.0015 18.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 BAJ51490.1 - 0.0069 16.0 0.0 0.0085 15.7 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 BAJ51490.1 - 0.018 14.8 0.0 0.021 14.6 0.0 1.3 1 0 0 1 1 1 0 Peptidase C26 GATase_5 PF13507.6 BAJ51490.1 - 0.042 12.9 0.0 0.051 12.7 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ThiJ_like PF17124.5 BAJ51490.1 - 0.097 12.3 0.0 0.45 10.2 0.0 1.9 1 1 1 2 2 2 0 ThiJ/PfpI family-like FeS_assembly_P PF01883.19 BAJ51491.1 - 1e-19 70.5 1.3 1.3e-19 70.1 1.3 1.2 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein NifU PF01106.17 BAJ51491.1 - 0.059 13.5 0.1 0.11 12.7 0.1 1.4 1 0 0 1 1 1 0 NifU-like domain GMP_synt_C PF00958.22 BAJ51491.1 - 0.1 12.6 0.1 0.2 11.7 0.0 1.4 1 1 0 1 1 1 0 GMP synthase C terminal domain tRNA-synt_1 PF00133.22 BAJ51492.1 - 1.7e-111 373.4 0.0 5.3e-110 368.4 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 BAJ51492.1 - 3.2e-32 111.6 0.1 6e-32 110.7 0.1 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 BAJ51492.1 - 8.1e-25 87.4 0.0 2.3e-12 46.4 0.0 3.6 2 1 0 2 2 2 2 tRNA synthetases class I (M) DZR PF12773.7 BAJ51492.1 - 0.00018 21.5 1.0 0.066 13.2 0.3 2.6 2 0 0 2 2 2 1 Double zinc ribbon tRNA-synt_1_2 PF13603.6 BAJ51492.1 - 0.00063 19.3 0.0 0.0018 17.8 0.0 1.7 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 TF_Zn_Ribbon PF08271.12 BAJ51492.1 - 0.0013 18.2 2.0 1.9 8.1 0.3 3.4 3 0 0 3 3 3 2 TFIIB zinc-binding zf-ribbon_3 PF13248.6 BAJ51492.1 - 0.0059 16.0 6.9 4.8 6.7 0.1 3.4 3 0 0 3 3 3 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 BAJ51492.1 - 0.0096 15.6 7.0 3.2 7.6 0.1 3.4 3 0 0 3 3 3 1 zinc-ribbon domain Nudix_N_2 PF14803.6 BAJ51492.1 - 0.016 15.1 4.9 6.8 6.7 0.0 3.0 2 1 0 2 2 2 0 Nudix N-terminal Zn-ribbon_8 PF09723.10 BAJ51492.1 - 0.018 15.2 1.7 0.28 11.3 0.5 2.6 2 0 0 2 2 2 0 Zinc ribbon domain tRNA-synt_1e PF01406.19 BAJ51492.1 - 0.029 13.7 0.0 0.41 9.9 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 BAJ51492.1 - 0.036 13.0 0.0 0.13 11.2 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetases class I (K) zf-TFIIB PF13453.6 BAJ51492.1 - 0.037 13.3 1.9 20 4.6 0.0 3.5 3 0 0 3 3 3 0 Transcription factor zinc-finger HypA PF01155.19 BAJ51492.1 - 0.12 12.4 0.1 0.73 9.9 0.1 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-NADH-PPase PF09297.11 BAJ51492.1 - 0.3 10.8 2.1 55 3.5 0.0 3.3 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-ACC PF17848.1 BAJ51492.1 - 0.37 10.9 5.0 85 3.4 0.1 4.2 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain zf-ISL3 PF14690.6 BAJ51492.1 - 0.6 10.8 3.9 7.4 7.3 0.0 3.0 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Auto_anti-p27 PF06677.12 BAJ51492.1 - 0.84 9.8 4.0 48 4.2 0.0 3.4 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Zn_Tnp_IS1595 PF12760.7 BAJ51492.1 - 1.2 9.2 6.5 10 6.2 0.3 3.4 3 0 0 3 3 3 0 Transposase zinc-ribbon domain DUF35_N PF12172.8 BAJ51492.1 - 1.5 8.8 8.2 12 5.9 0.5 3.4 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DNA_ligase_ZBD PF03119.16 BAJ51492.1 - 2.6 8.1 5.0 34 4.6 0.2 3.2 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain zf-RRN7 PF11781.8 BAJ51492.1 - 3.9 7.2 9.9 1.1 8.9 0.2 3.2 3 0 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 NUDIX PF00293.28 BAJ51493.1 - 2e-17 63.4 0.1 2.6e-17 63.1 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain BphX PF06139.12 BAJ51493.1 - 0.044 13.7 0.0 0.056 13.4 0.0 1.2 1 0 0 1 1 1 0 BphX-like DUF2103 PF09876.9 BAJ51494.1 - 0.1 12.6 0.9 2.2 8.3 0.0 2.4 2 0 0 2 2 2 0 Predicted metal-binding protein (DUF2103) HTH_20 PF12840.7 BAJ51495.1 - 5.9e-08 32.7 0.0 1.6e-07 31.2 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 BAJ51495.1 - 1.7e-07 31.0 0.0 5.4e-07 29.4 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 BAJ51495.1 - 0.00021 20.8 0.0 0.00039 19.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 BAJ51495.1 - 0.024 14.6 0.0 0.047 13.6 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_34 PF13601.6 BAJ51495.1 - 0.065 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Mga PF08280.11 BAJ51495.1 - 0.099 12.7 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Yip1 PF04893.17 BAJ51495.1 - 0.37 10.5 22.8 0.58 9.8 22.8 1.2 1 0 0 1 1 1 0 Yip1 domain UbiA PF01040.18 BAJ51496.1 - 4.6e-51 173.6 28.4 6.4e-51 173.1 28.4 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family SfsA PF03749.13 BAJ51497.1 - 1.6e-32 112.3 0.0 2.2e-32 111.8 0.0 1.2 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain SfsA_N PF17746.1 BAJ51497.1 - 3.8e-11 43.0 0.0 7.1e-11 42.1 0.0 1.5 1 0 0 1 1 1 1 SfsA N-terminal OB domain Citrate_synt PF00285.21 BAJ51498.1 - 1.5e-128 428.9 0.0 1.7e-128 428.8 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain AMP-binding PF00501.28 BAJ51499.1 - 2.1e-104 349.5 0.0 3.4e-104 348.8 0.0 1.3 2 0 0 2 2 2 1 AMP-binding enzyme AMP-binding_C PF13193.6 BAJ51499.1 - 2.6e-18 66.8 1.8 2.6e-18 66.8 1.8 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Thioredoxin_3 PF13192.6 BAJ51499.1 - 0.1 12.7 1.5 2.8 8.1 0.2 3.0 3 0 0 3 3 3 0 Thioredoxin domain Hs1pro-1_N PF07231.12 BAJ51500.1 - 0.0067 16.2 0.2 0.0082 15.9 0.2 1.2 1 0 0 1 1 1 1 Hs1pro-1 N-terminus Met_10 PF02475.16 BAJ51501.1 - 5.4e-49 166.6 0.0 7.2e-49 166.3 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_15 PF09445.10 BAJ51501.1 - 1.6e-06 27.8 0.0 2.8e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase DNA_methylase PF00145.17 BAJ51501.1 - 2.5e-05 23.8 0.0 3.7e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Cons_hypoth95 PF03602.15 BAJ51501.1 - 5.9e-05 22.8 0.0 0.0001 22.0 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 N6_N4_Mtase PF01555.18 BAJ51501.1 - 0.00034 20.4 0.0 0.0013 18.5 0.0 1.8 2 0 0 2 2 2 1 DNA methylase PrmA PF06325.13 BAJ51501.1 - 0.00041 19.8 0.0 0.00059 19.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 BAJ51501.1 - 0.0013 18.3 0.0 0.0021 17.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.20 BAJ51501.1 - 0.0043 16.2 0.0 0.0066 15.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 BAJ51501.1 - 0.0053 17.4 0.0 0.0098 16.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain TRM PF02005.16 BAJ51501.1 - 0.077 12.2 0.0 0.094 11.9 0.0 1.2 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase PRMT5 PF05185.16 BAJ51501.1 - 0.089 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase GCD14 PF08704.10 BAJ51501.1 - 0.17 11.5 0.1 0.36 10.4 0.1 1.6 1 1 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Ribosomal_S25 PF03297.15 BAJ51502.1 - 9.5e-16 57.9 0.5 9.5e-16 57.9 0.5 2.0 2 0 0 2 2 2 1 S25 ribosomal protein MarR_2 PF12802.7 BAJ51502.1 - 0.00027 20.7 0.1 0.00042 20.1 0.1 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 BAJ51502.1 - 0.0032 17.3 0.3 0.0055 16.6 0.3 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FeoC PF09012.10 BAJ51502.1 - 0.0059 16.6 0.0 0.0097 16.0 0.0 1.3 1 0 0 1 1 1 1 FeoC like transcriptional regulator Rrf2 PF02082.20 BAJ51502.1 - 0.0087 16.4 0.1 0.014 15.7 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator DUF2250 PF10007.9 BAJ51502.1 - 0.026 14.6 0.1 0.062 13.4 0.1 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Penicillinase_R PF03965.16 BAJ51502.1 - 0.034 14.5 0.1 0.046 14.1 0.1 1.3 1 0 0 1 1 1 0 Penicillinase repressor Cyclophil_like PF04126.13 BAJ51503.1 - 5.6e-11 42.3 0.0 7e-11 42.0 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin-like Cyclophil_like2 PF18050.1 BAJ51503.1 - 4.4e-05 23.4 0.0 7.2e-05 22.7 0.0 1.4 1 1 0 1 1 1 1 Cyclophilin-like family PhosphMutase PF10143.9 BAJ51504.1 - 1.5e-56 190.9 0.1 3.5e-56 189.7 0.0 1.6 2 0 0 2 2 2 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 BAJ51504.1 - 2.2e-33 115.7 0.0 2.5e-33 115.5 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 BAJ51504.1 - 0.0019 17.8 0.0 0.0044 16.6 0.0 1.6 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Rad51 PF08423.11 BAJ51505.1 - 4.8e-86 288.2 0.0 6.4e-86 287.8 0.0 1.1 1 0 0 1 1 1 1 Rad51 ATPase PF06745.13 BAJ51505.1 - 1.1e-10 41.3 0.1 1.9e-10 40.5 0.1 1.5 1 1 0 1 1 1 1 KaiC RecA PF00154.21 BAJ51505.1 - 1.6e-10 40.9 0.4 1e-09 38.3 0.1 1.9 1 1 1 2 2 2 1 recA bacterial DNA recombination protein HHH_5 PF14520.6 BAJ51505.1 - 7.8e-09 36.0 0.1 2.4e-08 34.5 0.1 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix domain AAA_25 PF13481.6 BAJ51505.1 - 2.4e-07 30.5 0.0 4e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain Cdd1 PF11731.8 BAJ51505.1 - 0.0019 18.4 0.0 0.0034 17.6 0.0 1.4 1 0 0 1 1 1 1 Pathogenicity locus HHH PF00633.23 BAJ51505.1 - 0.016 15.1 0.0 1.4 8.9 0.0 2.7 2 0 0 2 2 2 0 Helix-hairpin-helix motif AAA_22 PF13401.6 BAJ51505.1 - 0.037 14.3 0.0 0.077 13.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 BAJ51505.1 - 0.04 13.7 0.0 0.072 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain IMS_HHH PF11798.8 BAJ51505.1 - 0.045 14.1 0.0 0.13 12.6 0.0 1.9 1 0 0 1 1 1 0 IMS family HHH motif GalP_UDP_tr_C PF02744.17 BAJ51505.1 - 0.065 12.9 0.0 0.22 11.2 0.0 2.0 1 1 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain AAA_18 PF13238.6 BAJ51505.1 - 0.087 13.4 0.1 0.4 11.2 0.1 2.1 1 1 0 1 1 1 0 AAA domain TPR_19 PF14559.6 BAJ51506.1 - 0.0022 18.5 0.0 0.0038 17.7 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 BAJ51506.1 - 0.098 13.3 0.1 0.2 12.4 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 BAJ51506.1 - 0.16 12.8 0.1 0.34 11.9 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Rab5ip PF07019.12 BAJ51507.1 - 0.02 15.5 6.6 0.024 15.2 6.6 1.1 1 0 0 1 1 1 0 Rab5-interacting protein (Rab5ip) CbtA PF09490.10 BAJ51507.1 - 0.027 14.2 0.3 0.027 14.2 0.3 1.8 1 1 1 2 2 2 0 Probable cobalt transporter subunit (CbtA) FbpA PF05833.11 BAJ51508.1 - 8.7e-40 136.8 0.0 1.3e-39 136.2 0.0 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 BAJ51508.1 - 3.3e-17 63.1 0.0 7e-17 62.1 0.0 1.5 1 0 0 1 1 1 1 NFACT protein RNA binding domain Ribosomal_S13 PF00416.22 BAJ51508.1 - 8.7e-06 26.2 0.0 2.7e-05 24.6 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein S13/S18 NFACT-R_2 PF18297.1 BAJ51508.1 - 4.4e-05 23.6 0.0 0.00013 22.1 0.0 1.8 1 0 0 1 1 1 1 NFACT protein RNA binding domain CLZ PF16526.5 BAJ51508.1 - 0.021 15.2 3.8 0.4 11.1 0.3 3.5 3 1 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels TSC22 PF01166.18 BAJ51508.1 - 0.11 12.8 0.3 0.11 12.8 0.3 2.2 2 0 0 2 2 2 0 TSC-22/dip/bun family Prefoldin_2 PF01920.20 BAJ51508.1 - 0.26 11.3 3.4 0.29 11.1 0.3 2.5 2 0 0 2 2 2 0 Prefoldin subunit zf-CpG_bind_C PF12269.8 BAJ51508.1 - 0.35 10.6 1.3 3.2 7.5 0.2 2.1 2 0 0 2 2 2 0 CpG binding protein zinc finger C terminal domain AAA_23 PF13476.6 BAJ51508.1 - 1.1 9.7 3.5 2 8.9 3.5 1.4 1 0 0 1 1 1 0 AAA domain APG6_N PF17675.1 BAJ51508.1 - 6.6 7.3 11.0 8.1 7.0 0.1 2.8 3 0 0 3 3 3 0 Apg6 coiled-coil region CBS PF00571.28 BAJ51509.1 - 4.1e-26 91.2 5.3 1.2e-12 48.1 0.6 2.2 2 0 0 2 2 2 2 CBS domain DUF2318 PF10080.9 BAJ51509.1 - 0.094 12.9 0.1 0.17 12.0 0.1 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) Mut7-C PF01927.16 BAJ51510.1 - 1.2e-30 106.5 6.4 4.8e-29 101.3 6.4 2.0 1 1 0 1 1 1 1 Mut7-C RNAse domain DUF5615 PF18480.1 BAJ51510.1 - 8.9e-08 31.8 0.1 1.3e-07 31.2 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) PIN_9 PF18477.1 BAJ51510.1 - 0.00035 20.9 0.4 0.00057 20.2 0.4 1.3 1 0 0 1 1 1 1 PIN like domain ADH_zinc_N PF00107.26 BAJ51510.1 - 0.0075 16.3 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Zn_Tnp_IS1595 PF12760.7 BAJ51510.1 - 0.031 14.3 1.1 0.05 13.6 1.1 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain ADK_lid PF05191.14 BAJ51510.1 - 0.042 13.8 1.8 0.099 12.6 0.2 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-BED PF02892.15 BAJ51510.1 - 0.046 13.7 1.4 0.046 13.7 1.4 1.7 1 1 0 1 1 1 0 BED zinc finger ZnuA PF01297.17 BAJ51510.1 - 0.054 12.9 0.0 0.063 12.7 0.0 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic PIN_10 PF18478.1 BAJ51510.1 - 0.12 12.6 0.3 0.68 10.2 0.2 2.2 2 1 0 2 2 2 0 PIN like domain DUF188 PF02639.14 BAJ51510.1 - 0.12 12.0 0.1 0.18 11.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 DNA_ligase_ZBD PF03119.16 BAJ51510.1 - 0.15 12.1 1.7 0.26 11.3 1.7 1.4 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain zf-Dof PF02701.15 BAJ51510.1 - 0.22 11.7 5.4 0.39 10.9 5.4 1.4 1 1 0 1 1 1 0 Dof domain, zinc finger OrfB_Zn_ribbon PF07282.11 BAJ51510.1 - 0.29 11.1 2.6 0.64 10.0 1.6 2.0 1 1 1 2 2 2 0 Putative transposase DNA-binding domain SR1P PF13790.6 BAJ51510.1 - 1.7 8.8 4.2 5 7.3 0.2 2.9 3 0 0 3 3 3 0 SR1 protein zf-Sec23_Sec24 PF04810.15 BAJ51510.1 - 3.2 7.9 5.9 56 3.9 5.7 2.1 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger AMMECR1 PF01871.17 BAJ51511.1 - 4.5e-48 163.0 0.0 5.5e-48 162.7 0.0 1.1 1 0 0 1 1 1 1 AMMECR1 Glyco_trans_1_3 PF13528.6 BAJ51512.1 - 7.6e-21 74.7 0.0 2.5e-20 73.0 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.16 BAJ51512.1 - 2.4e-15 56.9 0.0 1.5e-14 54.3 0.0 2.0 2 0 0 2 2 2 1 Glycosyltransferase family 28 C-terminal domain UDPGT PF00201.18 BAJ51512.1 - 7.9e-07 28.2 0.0 1.2e-05 24.3 0.0 2.1 1 1 1 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase AAA_assoc_C PF09821.9 BAJ51513.1 - 1.3e-26 93.5 0.3 1.8e-26 93.0 0.3 1.1 1 0 0 1 1 1 1 C-terminal AAA-associated domain ABC_tran PF00005.27 BAJ51514.1 - 2.4e-35 122.0 0.0 2.9e-34 118.5 0.0 2.1 2 1 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 BAJ51514.1 - 1.3e-08 35.0 0.4 0.0039 17.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 BAJ51514.1 - 0.0042 16.8 0.2 0.0099 15.6 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 BAJ51514.1 - 0.013 15.9 0.1 0.36 11.2 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 BAJ51514.1 - 0.014 15.7 0.1 0.031 14.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain MobB PF03205.14 BAJ51514.1 - 0.029 14.2 0.5 0.059 13.3 0.2 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.22 BAJ51514.1 - 0.055 12.6 0.4 0.1 11.8 0.4 1.4 1 0 0 1 1 1 0 NB-ARC domain RsgA_GTPase PF03193.16 BAJ51514.1 - 0.076 12.9 0.3 0.17 11.8 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase NACHT PF05729.12 BAJ51514.1 - 0.078 12.9 1.1 0.17 11.8 0.3 1.8 2 0 0 2 2 2 0 NACHT domain AAA_23 PF13476.6 BAJ51514.1 - 0.11 13.0 0.2 0.17 12.4 0.2 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 BAJ51514.1 - 0.19 11.5 0.4 0.62 9.7 0.2 1.8 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 BAJ51514.1 - 0.24 11.1 0.2 0.39 10.4 0.2 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 BAJ51514.1 - 0.43 10.7 1.3 0.86 9.7 0.3 2.3 2 1 0 2 2 2 0 50S ribosome-binding GTPase BPD_transp_1 PF00528.22 BAJ51515.1 - 1.9e-25 89.7 38.9 4.9e-17 62.2 8.1 3.1 2 2 0 3 3 3 2 Binding-protein-dependent transport system inner membrane component polyprenyl_synt PF00348.17 BAJ51516.1 - 5.4e-39 133.8 0.2 7.2e-39 133.4 0.2 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Thioredoxin PF00085.20 BAJ51517.1 - 1.1e-30 105.7 0.0 1.4e-30 105.3 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 BAJ51517.1 - 1.3e-08 35.2 0.1 1.1e-07 32.3 0.1 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 BAJ51517.1 - 1.2e-07 32.0 0.0 1.8e-05 25.0 0.0 2.3 1 1 1 2 2 2 1 Thioredoxin-like OST3_OST6 PF04756.13 BAJ51517.1 - 2.2e-06 27.2 0.0 2.9e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 BAJ51517.1 - 0.0005 20.0 0.0 0.0022 17.9 0.0 1.8 1 1 1 2 2 2 1 AhpC/TSA family Thioredoxin_3 PF13192.6 BAJ51517.1 - 0.0011 19.0 0.0 0.0018 18.2 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin domain Redoxin PF08534.10 BAJ51517.1 - 0.0013 18.5 0.1 0.0068 16.1 0.1 1.9 1 1 1 2 2 2 1 Redoxin Thioredoxin_9 PF14595.6 BAJ51517.1 - 0.0018 18.0 0.0 0.0034 17.2 0.0 1.3 1 1 0 1 1 1 1 Thioredoxin HyaE PF07449.11 BAJ51517.1 - 0.0039 17.1 0.0 0.0061 16.5 0.0 1.4 1 1 0 1 1 1 1 Hydrogenase-1 expression protein HyaE TraF PF13728.6 BAJ51517.1 - 0.0054 16.6 0.1 0.031 14.1 0.0 1.9 1 1 1 2 2 2 1 F plasmid transfer operon protein Thioredoxin_7 PF13899.6 BAJ51517.1 - 0.017 15.3 0.0 0.028 14.6 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like DSBA PF01323.20 BAJ51517.1 - 0.018 14.9 0.4 0.14 11.9 0.0 2.1 1 1 1 2 2 2 0 DSBA-like thioredoxin domain DUF953 PF06110.11 BAJ51517.1 - 0.028 14.0 0.1 0.19 11.3 0.1 2.2 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Amidohydro_2 PF04909.14 BAJ51517.1 - 0.047 13.5 0.1 0.06 13.1 0.1 1.1 1 0 0 1 1 1 0 Amidohydrolase Aminotran_1_2 PF00155.21 BAJ51519.1 - 2.5e-45 155.3 0.0 3.2e-45 154.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 BAJ51519.1 - 2.1e-08 33.5 0.0 4.8e-07 29.1 0.0 2.1 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 BAJ51519.1 - 2.1e-07 29.8 0.0 4.1e-07 28.9 0.0 1.4 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.13 BAJ51519.1 - 0.00034 19.6 0.0 0.0011 17.9 0.0 1.7 2 0 0 2 2 2 1 Allinase DegT_DnrJ_EryC1 PF01041.17 BAJ51519.1 - 0.0036 16.7 0.0 0.006 15.9 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_MocR PF12897.7 BAJ51519.1 - 0.027 13.3 0.0 0.048 12.5 0.0 1.3 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase TFIIE_alpha PF02002.17 BAJ51520.1 - 1e-17 63.9 0.4 1.5e-17 63.3 0.4 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit Acetyltransf_6 PF13480.7 BAJ51520.1 - 0.001 19.2 0.1 0.0019 18.3 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain IBR PF01485.21 BAJ51520.1 - 0.0038 17.4 0.2 0.006 16.8 0.2 1.3 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain TrmB PF01978.19 BAJ51520.1 - 0.0082 16.0 0.2 0.045 13.6 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_9 PF08221.11 BAJ51520.1 - 0.017 15.2 0.0 0.028 14.5 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HypA PF01155.19 BAJ51520.1 - 0.033 14.2 0.1 0.06 13.4 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF977 PF06163.11 BAJ51520.1 - 0.05 13.6 0.1 0.071 13.1 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) zf_C2H2_13 PF18508.1 BAJ51520.1 - 0.11 12.1 0.0 0.32 10.6 0.0 1.8 1 0 0 1 1 1 0 Zinc finger domain Sigma70_r3 PF04539.16 BAJ51520.1 - 0.14 12.3 0.6 0.27 11.3 0.1 1.6 2 0 0 2 2 2 0 Sigma-70 region 3 Trm56 PF01994.16 BAJ51521.1 - 1.7e-45 153.7 0.1 2.7e-45 153.1 0.1 1.3 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 Glyco_trans_1_4 PF13692.6 BAJ51521.1 - 0.091 13.2 0.1 0.18 12.3 0.1 1.5 1 0 0 1 1 1 0 Glycosyl transferases group 1 V_ATPase_I PF01496.19 BAJ51522.1 - 2.4e-23 82.0 5.5 1.9e-11 42.7 0.0 3.4 3 0 0 3 3 3 3 V-type ATPase 116kDa subunit family TMF_TATA_bd PF12325.8 BAJ51522.1 - 0.016 15.4 1.0 2.9 8.1 0.2 2.4 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF374 PF04028.13 BAJ51522.1 - 0.02 14.5 0.0 0.052 13.1 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF374) AAA_13 PF13166.6 BAJ51522.1 - 0.18 10.4 0.9 0.3 9.7 0.9 1.3 1 1 0 1 1 1 0 AAA domain Oxidored_q3 PF00499.20 BAJ51523.1 - 1.3e-10 41.2 11.8 1.3e-10 41.2 11.8 1.6 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF4040 PF13244.6 BAJ51523.1 - 0.0048 17.0 16.4 0.0066 16.6 16.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4040) SLATT_fungal PF18142.1 BAJ51523.1 - 0.034 14.1 1.5 0.047 13.7 1.5 1.3 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain DUF2070 PF09843.9 BAJ51523.1 - 0.89 7.8 9.9 0.9 7.8 9.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) CitMHS PF03600.16 BAJ51523.1 - 6 6.0 9.4 8.1 5.5 9.4 1.2 1 0 0 1 1 1 0 Citrate transporter SLATT_3 PF18184.1 BAJ51523.1 - 6.2 6.9 7.9 1.6 8.8 4.5 1.6 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 3 TNFR_16_TM PF18422.1 BAJ51524.1 - 2 8.4 7.0 2.7 8.0 1.1 2.5 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain Oxidored_q2 PF00420.24 BAJ51525.1 - 1.3e-20 73.0 5.7 1.6e-20 72.7 5.7 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Metallophos_2 PF12850.7 BAJ51527.1 - 7.1e-16 58.8 0.1 1.4e-15 57.9 0.1 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 BAJ51527.1 - 2.1e-14 54.5 0.3 3.1e-14 54.0 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase CoA_binding_2 PF13380.6 BAJ51528.1 - 7.1e-39 132.9 0.2 8.4e-39 132.7 0.2 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 BAJ51528.1 - 1.1e-07 32.4 0.0 2.1e-07 31.6 0.0 1.4 2 0 0 2 2 2 1 CoA binding domain Radical_SAM PF04055.21 BAJ51529.1 - 1.5e-09 38.5 0.0 2.4e-09 37.8 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily DZR PF12773.7 BAJ51529.1 - 0.016 15.2 0.1 0.016 15.2 0.1 2.8 3 0 0 3 3 3 0 Double zinc ribbon zf-ribbon_3 PF13248.6 BAJ51529.1 - 0.11 11.9 7.3 2.9 7.4 0.2 3.7 3 0 0 3 3 3 0 zinc-ribbon domain zf-CCHC_5 PF14787.6 BAJ51529.1 - 0.17 11.6 0.2 0.17 11.6 0.2 1.9 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger zf-ISL3 PF14690.6 BAJ51529.1 - 1 10.0 0.0 1 10.0 0.0 3.3 3 1 1 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zinc_ribbon_2 PF13240.6 BAJ51529.1 - 2.4 8.0 11.3 3.8 7.4 0.2 3.6 4 0 0 4 4 4 0 zinc-ribbon domain zf-ACC PF17848.1 BAJ51529.1 - 3.6 7.7 6.4 1.7 8.8 0.1 2.8 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain Thy1 PF02511.15 BAJ51531.1 - 2.5e-37 128.5 0.2 5.4e-20 72.0 0.0 2.1 2 0 0 2 2 2 2 Thymidylate synthase complementing protein MerR_1 PF13411.6 BAJ51531.1 - 0.15 12.2 0.0 13 6.0 0.0 2.5 2 0 0 2 2 2 0 MerR HTH family regulatory protein PTPS PF01242.19 BAJ51532.1 - 6.6e-23 81.0 0.0 9e-23 80.6 0.0 1.1 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase QueC PF06508.13 BAJ51533.1 - 1.2e-39 136.0 0.0 1.4e-39 135.8 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 BAJ51533.1 - 6.7e-06 25.8 0.0 1.4e-05 24.8 0.0 1.5 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 BAJ51533.1 - 0.00015 20.7 0.0 0.00019 20.3 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase ATP_bind_3 PF01171.20 BAJ51533.1 - 0.036 13.8 0.0 0.16 11.7 0.0 1.9 2 1 0 2 2 2 0 PP-loop family Not1 PF04054.15 BAJ51533.1 - 0.13 11.1 0.0 0.17 10.7 0.0 1.1 1 0 0 1 1 1 0 CCR4-Not complex component, Not1 Asn_synthase PF00733.21 BAJ51533.1 - 0.18 11.4 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase Diphthami_syn_2 PF01902.17 BAJ51533.1 - 0.22 11.0 0.0 0.33 10.4 0.0 1.3 1 0 0 1 1 1 0 Diphthamide synthase NAD_kinase PF01513.21 BAJ51534.1 - 1.2e-36 126.4 0.6 1.4e-36 126.2 0.6 1.0 1 0 0 1 1 1 1 ATP-NAD kinase PIN_6 PF17146.4 BAJ51535.1 - 1.1e-16 61.1 0.1 1.8e-16 60.4 0.1 1.3 1 0 0 1 1 1 1 PIN domain of ribonuclease NOB1_Zn_bind PF08772.11 BAJ51535.1 - 0.0032 17.6 0.8 0.0055 16.8 0.8 1.4 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like Zn-ribbon_8 PF09723.10 BAJ51535.1 - 0.018 15.1 3.0 0.054 13.6 3.0 1.8 1 1 0 1 1 1 0 Zinc ribbon domain HypA PF01155.19 BAJ51535.1 - 0.07 13.2 0.2 0.099 12.7 0.2 1.5 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PIN_4 PF13638.6 BAJ51535.1 - 0.11 12.8 0.0 0.81 10.0 0.0 2.0 2 0 0 2 2 2 0 PIN domain PIN_5 PF08745.11 BAJ51535.1 - 0.15 11.5 1.0 2 7.8 0.2 2.1 1 1 0 2 2 2 0 PINc domain ribonuclease zf-C2H2 PF00096.26 BAJ51535.1 - 0.16 12.5 3.3 0.26 11.8 0.7 2.2 1 1 1 2 2 2 0 Zinc finger, C2H2 type Zn_ribbon_SprT PF17283.2 BAJ51535.1 - 0.36 10.8 6.7 1.3 8.9 6.7 1.8 1 1 0 1 1 1 0 SprT-like zinc ribbon domain Rubredoxin_2 PF18073.1 BAJ51535.1 - 0.69 9.7 3.0 1.1 9.0 3.0 1.4 1 0 0 1 1 1 0 Rubredoxin metal binding domain DUF998 PF06197.13 BAJ51536.1 - 2.4e-14 53.3 30.8 2.9e-14 53.1 30.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF998) Dicty_CAR PF05462.11 BAJ51536.1 - 0.023 13.8 0.7 0.032 13.4 0.7 1.3 1 0 0 1 1 1 0 Slime mold cyclic AMP receptor DUF3481 PF11980.8 BAJ51537.1 - 0.062 13.0 0.1 0.18 11.5 0.1 1.9 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein CPBP PF02517.16 BAJ51537.1 - 0.61 10.5 12.2 0.87 10.0 8.2 2.8 2 1 0 2 2 2 0 CPBP intramembrane metalloprotease CopD PF05425.13 BAJ51538.1 - 0.0014 18.9 5.7 0.0014 18.9 5.7 1.8 2 1 0 2 2 2 1 Copper resistance protein D DUF4149 PF13664.6 BAJ51538.1 - 0.0062 16.8 0.5 0.0091 16.3 0.5 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4149) GATase PF00117.28 BAJ51539.1 - 1.4e-38 132.6 0.0 2e-38 132.1 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GMP_synt_C PF00958.22 BAJ51539.1 - 4.7e-32 109.9 0.0 1e-31 108.8 0.0 1.6 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.17 BAJ51539.1 - 1.2e-08 34.3 0.1 0.001 18.3 0.0 2.2 2 0 0 2 2 2 2 NAD synthase Peptidase_C26 PF07722.13 BAJ51539.1 - 7.8e-08 32.3 0.1 2.4e-07 30.7 0.1 1.9 1 1 0 1 1 1 1 Peptidase C26 tRNA_Me_trans PF03054.16 BAJ51539.1 - 0.00042 19.2 0.0 0.035 12.9 0.0 2.1 2 0 0 2 2 2 2 tRNA methyl transferase ThiI PF02568.14 BAJ51539.1 - 0.0015 18.1 0.0 0.0051 16.4 0.0 1.7 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 BAJ51539.1 - 0.003 17.1 0.0 0.055 13.0 0.0 2.2 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 BAJ51539.1 - 0.0036 17.1 0.0 0.016 15.0 0.0 1.9 2 0 0 2 2 2 1 PP-loop family Asn_synthase PF00733.21 BAJ51539.1 - 0.038 13.7 0.0 0.053 13.2 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase ECH_1 PF00378.20 BAJ51540.1 - 4e-72 242.5 0.1 4.5e-72 242.4 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 BAJ51540.1 - 6.6e-41 140.9 0.2 1.1e-38 133.6 0.1 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 BAJ51540.1 - 0.0026 17.7 0.0 0.0061 16.5 0.0 1.6 1 0 0 1 1 1 1 Peptidase family S49 SDH_sah PF01972.16 BAJ51540.1 - 0.0038 16.3 0.0 0.0099 14.9 0.0 1.6 1 1 1 2 2 2 1 Serine dehydrogenase proteinase SeleniumBinding PF11524.8 BAJ51540.1 - 0.018 15.4 0.0 0.041 14.3 0.0 1.5 1 0 0 1 1 1 0 Selenium binding protein NucS PF01939.16 BAJ51540.1 - 0.027 13.8 0.0 0.044 13.1 0.0 1.3 1 0 0 1 1 1 0 Endonuclease NucS DUF3731 PF12531.8 BAJ51540.1 - 0.044 13.6 0.2 0.044 13.6 0.2 1.5 2 0 0 2 2 2 0 DNA-K related protein AMP-binding_C PF13193.6 BAJ51540.1 - 0.11 13.5 0.5 3.9 8.5 0.0 2.5 2 0 0 2 2 2 0 AMP-binding enzyme C-terminal domain AdoMet_dc PF02675.15 BAJ51542.1 - 7.3e-36 122.7 0.0 9.1e-36 122.3 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase Spermine_synth PF01564.17 BAJ51543.1 - 8.3e-43 146.0 0.0 1.2e-42 145.5 0.0 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Spermine_synt_N PF17284.2 BAJ51543.1 - 3.3e-11 42.9 0.0 5.6e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain Methyltransf_30 PF05430.11 BAJ51543.1 - 0.022 14.6 0.0 0.042 13.7 0.0 1.4 1 0 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase Cons_hypoth95 PF03602.15 BAJ51543.1 - 0.16 11.6 0.0 0.32 10.6 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 BPD_transp_1 PF00528.22 BAJ51544.1 - 1.2e-17 64.3 19.1 1.7e-17 63.8 19.1 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 BAJ51545.1 - 1.2e-29 103.5 0.0 1.7e-29 103.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 BAJ51545.1 - 0.00025 20.7 0.2 0.00053 19.7 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 BAJ51545.1 - 0.0004 20.3 0.0 0.73 9.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ51545.1 - 0.0042 16.5 0.1 0.26 10.7 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAJ51545.1 - 0.0068 16.9 0.1 0.0097 16.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAJ51545.1 - 0.011 16.1 0.5 0.019 15.3 0.5 1.7 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 BAJ51545.1 - 0.012 15.5 0.3 0.022 14.6 0.0 1.5 2 0 0 2 2 2 0 RsgA GTPase MobB PF03205.14 BAJ51545.1 - 0.043 13.7 0.1 0.09 12.7 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_25 PF13481.6 BAJ51545.1 - 0.046 13.3 0.2 0.19 11.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 BAJ51545.1 - 0.06 13.9 0.1 0.11 13.1 0.1 1.4 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 BAJ51545.1 - 0.064 13.2 0.1 0.14 12.0 0.1 1.6 1 0 0 1 1 1 0 NACHT domain PduV-EutP PF10662.9 BAJ51545.1 - 0.11 12.2 0.2 0.23 11.2 0.2 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_30 PF13604.6 BAJ51545.1 - 0.12 12.1 0.5 0.21 11.3 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 BAJ51545.1 - 0.12 12.6 1.5 0.37 11.0 0.2 2.0 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 BAJ51545.1 - 0.14 11.7 1.2 0.18 11.4 0.3 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain NTPase_1 PF03266.15 BAJ51545.1 - 0.28 11.1 1.5 0.96 9.3 0.3 2.0 2 0 0 2 2 2 0 NTPase Phosphonate-bd PF12974.7 BAJ51546.1 - 7.3e-50 169.8 0.1 9.1e-50 169.5 0.1 1.0 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1_3 PF16868.5 BAJ51546.1 - 2.1e-06 27.4 0.0 3.4e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 BAJ51546.1 - 0.00013 22.0 0.0 0.0012 18.9 0.0 2.5 1 1 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.20 BAJ51546.1 - 0.00015 21.3 0.0 0.0088 15.5 0.0 2.2 1 1 1 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 LysR_substrate PF03466.20 BAJ51546.1 - 0.0013 18.1 0.1 1.7 8.0 0.0 2.5 2 0 0 2 2 2 2 LysR substrate binding domain HTH_3 PF01381.22 BAJ51547.1 - 2.6e-05 24.2 0.1 0.0065 16.5 0.1 2.8 2 0 0 2 2 2 1 Helix-turn-helix Ferritin_2 PF13668.6 BAJ51547.1 - 0.00079 19.6 0.4 0.0017 18.5 0.4 1.6 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 BAJ51547.1 - 0.0048 17.3 5.0 0.014 15.8 2.8 2.7 2 1 0 2 2 2 1 Rubrerythrin HTH_23 PF13384.6 BAJ51547.1 - 0.045 13.6 0.1 0.31 10.9 0.1 2.3 2 0 0 2 2 2 0 Homeodomain-like domain Phenol_Hydrox PF02332.18 BAJ51547.1 - 0.053 13.1 0.1 0.44 10.1 0.0 2.2 2 0 0 2 2 2 0 Methane/Phenol/Toluene Hydroxylase P22_Cro PF14549.6 BAJ51547.1 - 0.059 13.2 0.1 0.36 10.7 0.0 2.2 1 1 1 2 2 2 0 DNA-binding transcriptional regulator Cro KORA PF16509.5 BAJ51547.1 - 0.14 12.5 1.3 9.3 6.6 0.2 3.2 3 1 1 4 4 4 0 TrfB plasmid transcriptional repressor DUF1840 PF08895.11 BAJ51547.1 - 0.17 12.2 2.2 0.45 10.9 1.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF1840) HTH_31 PF13560.6 BAJ51547.1 - 0.25 11.7 0.3 0.25 11.7 0.3 3.3 2 1 1 3 3 3 0 Helix-turn-helix domain ABC-3 PF00950.17 BAJ51548.1 - 3e-72 243.2 38.3 3.4e-72 243.1 38.3 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 BAJ51548.1 - 0.12 11.3 38.9 0.17 10.9 38.2 1.5 1 1 0 1 1 1 0 FecCD transport family ABC_tran PF00005.27 BAJ51549.1 - 4.8e-32 111.3 0.0 7e-32 110.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51549.1 - 8.1e-14 52.1 1.1 2.2e-06 27.7 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAJ51549.1 - 7.6e-08 32.1 0.5 0.00014 21.4 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 BAJ51549.1 - 6.4e-06 26.1 0.0 0.0033 17.2 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 BAJ51549.1 - 1.1e-05 25.0 0.0 2.2e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 BAJ51549.1 - 3.3e-05 24.5 0.2 0.0001 22.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 BAJ51549.1 - 0.0038 17.3 0.0 0.0063 16.6 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 BAJ51549.1 - 0.0038 17.1 0.1 0.015 15.2 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA PF00004.29 BAJ51549.1 - 0.0039 17.6 0.0 0.17 12.3 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 BAJ51549.1 - 0.0092 16.2 0.8 0.2 11.9 0.8 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ATP_bind_1 PF03029.17 BAJ51549.1 - 0.0098 15.7 0.1 0.083 12.7 0.0 2.0 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 BAJ51549.1 - 0.01 16.1 0.6 0.021 15.1 0.1 1.8 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 BAJ51549.1 - 0.011 16.3 0.0 0.54 10.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 BAJ51549.1 - 0.013 14.3 0.1 0.075 11.8 0.1 1.9 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.6 BAJ51549.1 - 0.013 15.6 0.1 0.032 14.4 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 BAJ51549.1 - 0.026 14.9 0.8 0.074 13.4 0.8 1.9 1 1 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 BAJ51549.1 - 0.035 13.7 0.1 0.076 12.6 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 BAJ51549.1 - 0.049 13.3 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 BAJ51549.1 - 0.053 13.6 0.8 2.1 8.4 0.1 2.7 2 1 0 2 2 2 0 AAA domain Roc PF08477.13 BAJ51549.1 - 0.056 13.7 0.0 0.14 12.3 0.0 1.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase IstB_IS21 PF01695.17 BAJ51549.1 - 0.13 12.0 0.1 7.9 6.2 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein Zot PF05707.12 BAJ51549.1 - 0.13 11.9 0.0 1.8 8.1 0.0 2.1 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) ATPase_2 PF01637.18 BAJ51549.1 - 0.13 12.1 0.0 0.75 9.7 0.0 1.9 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 BAJ51549.1 - 0.15 11.7 0.1 2.2 8.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain ZnuA PF01297.17 BAJ51550.1 - 7.4e-73 245.1 0.0 9.2e-73 244.8 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Toprim_4 PF13662.6 BAJ51551.1 - 4.5e-12 46.3 0.1 1.5e-11 44.6 0.1 1.9 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 BAJ51551.1 - 1.5e-05 25.3 0.0 5.6e-05 23.5 0.0 2.0 2 0 0 2 2 2 1 Toprim-like Toprim PF01751.22 BAJ51551.1 - 4e-05 23.8 0.1 0.00029 21.0 0.1 2.4 1 1 0 1 1 1 1 Toprim domain Aldedh PF00171.22 BAJ51551.1 - 0.072 11.6 2.6 0.082 11.4 0.1 2.1 3 0 0 3 3 3 0 Aldehyde dehydrogenase family eRF1_3 PF03465.15 BAJ51552.1 - 1.6e-17 64.0 0.0 3.9e-17 62.7 0.0 1.7 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.15 BAJ51552.1 - 1.2e-13 51.2 0.2 2e-13 50.4 0.2 1.3 1 0 0 1 1 1 1 eRF1 domain 1 Amdase PF17645.1 BAJ51553.1 - 2.8e-29 102.3 0.0 3.1e-29 102.2 0.0 1.0 1 0 0 1 1 1 1 Arylmalonate decarboxylase Asp_Glu_race PF01177.22 BAJ51553.1 - 9e-18 64.9 0.0 1.9e-17 63.9 0.0 1.5 1 1 1 2 2 2 1 Asp/Glu/Hydantoin racemase Hydantoinase_A PF01968.18 BAJ51554.1 - 4.8e-92 308.3 3.7 4.8e-92 308.3 3.7 2.5 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 BAJ51554.1 - 2.6e-46 157.6 0.0 6.8e-46 156.2 0.0 1.7 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region ROK PF00480.20 BAJ51554.1 - 0.025 14.1 0.0 0.13 11.8 0.0 2.2 3 0 0 3 3 3 0 ROK family MutL PF13941.6 BAJ51554.1 - 0.04 12.5 0.8 1.5 7.3 0.0 2.4 2 0 0 2 2 2 0 MutL protein Hydantoinase_B PF02538.14 BAJ51555.1 - 5.7e-186 618.9 0.0 7e-186 618.6 0.0 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Methyltransf_16 PF10294.9 BAJ51555.1 - 0.14 11.8 0.0 0.26 11.0 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Ribosomal_S7 PF00177.21 BAJ51556.1 - 6.8e-38 129.6 1.1 8.8e-38 129.3 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e PEPcase_2 PF14010.6 BAJ51557.1 - 3.6e-156 520.5 0.0 4e-156 520.4 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase UPF0147 PF03685.13 BAJ51557.1 - 0.11 12.6 0.4 0.62 10.2 0.0 2.4 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0147) PEPcase PF00311.17 BAJ51557.1 - 0.15 10.1 0.0 0.22 9.6 0.0 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase BPD_transp_2 PF02653.16 BAJ51558.1 - 5.8e-33 114.2 37.7 8e-33 113.7 37.7 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 BAJ51559.1 - 1.6e-31 109.4 30.9 1.6e-31 109.4 30.9 1.5 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 BAJ51560.1 - 1.4e-51 174.7 0.0 2.7e-31 108.9 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 BAJ51560.1 - 4.2e-08 33.3 0.0 0.0031 17.4 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 BAJ51560.1 - 4.7e-05 23.4 0.5 0.012 15.5 0.0 3.1 3 1 0 3 3 3 1 RsgA GTPase AAA_29 PF13555.6 BAJ51560.1 - 0.0001 22.0 0.0 0.0045 16.7 0.0 2.7 3 0 0 3 3 3 1 P-loop containing region of AAA domain SMC_N PF02463.19 BAJ51560.1 - 0.0023 17.4 0.9 1.7 8.0 0.1 2.6 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAJ51560.1 - 0.012 16.2 0.0 0.034 14.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 BAJ51560.1 - 0.047 13.8 0.1 0.5 10.5 0.0 2.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_16 PF13191.6 BAJ51560.1 - 0.059 13.7 0.3 1.3 9.4 0.0 2.7 2 2 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.6 BAJ51560.1 - 0.098 12.9 0.9 14 5.9 0.0 3.3 4 0 0 4 4 4 0 AAA domain AAA_27 PF13514.6 BAJ51560.1 - 0.14 11.8 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 BAJ51560.1 - 0.21 11.3 1.0 0.87 9.3 0.0 2.4 4 0 0 4 4 4 0 AAA domain Bmp PF02608.14 BAJ51561.1 - 8.3e-33 113.6 0.4 8.3e-33 113.6 0.4 1.3 2 0 0 2 2 2 1 ABC transporter substrate-binding protein PnrA-like UCR_Fe-S_N PF10399.9 BAJ51561.1 - 0.0012 18.1 1.0 0.0012 18.1 1.0 2.3 2 0 0 2 2 2 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SpoVAD PF07451.11 BAJ51561.1 - 0.0022 16.8 0.2 0.0043 15.8 0.2 1.4 1 0 0 1 1 1 1 Stage V sporulation protein AD (SpoVAD) CytB6-F_Fe-S PF08802.10 BAJ51561.1 - 1.2 9.2 9.5 0.071 13.1 1.1 2.6 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit Adenine_deam_C PF13382.6 BAJ51562.1 - 6.2e-65 217.7 0.0 1.1e-64 216.9 0.0 1.4 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 BAJ51562.1 - 7e-24 84.8 0.1 6.8e-22 78.2 0.1 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 BAJ51562.1 - 5.3e-13 49.2 0.7 3e-06 27.0 0.0 2.5 2 0 0 2 2 2 2 Amidohydrolase family Bac_luciferase PF00296.20 BAJ51563.1 - 1.5e-67 228.3 0.9 1.8e-67 228.0 0.9 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase DUF179 PF02622.15 BAJ51563.1 - 0.081 12.9 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized ACR, COG1678 Amidohydro_1 PF01979.20 BAJ51564.1 - 3.7e-61 207.3 0.0 4.6e-61 207.0 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 BAJ51564.1 - 1.4e-18 67.7 0.0 2.2e-12 47.2 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family TatD_DNase PF01026.21 BAJ51564.1 - 0.059 12.7 0.0 0.097 12.0 0.0 1.3 1 0 0 1 1 1 0 TatD related DNase FAD_binding_5 PF00941.21 BAJ51565.1 - 2.6e-32 111.9 0.1 3.7e-32 111.4 0.1 1.1 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 BAJ51565.1 - 1.3e-08 34.9 0.0 2.8e-08 33.8 0.0 1.6 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.20 BAJ51566.1 - 6.1e-22 77.4 0.0 6.1e-22 77.4 0.0 1.5 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 BAJ51566.1 - 1.6e-06 28.0 0.4 1.6e-06 28.0 0.4 2.0 1 1 1 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 BAJ51566.1 - 0.0016 18.4 0.0 0.0028 17.7 0.0 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 BAJ51566.1 - 0.029 14.4 0.7 0.052 13.6 0.2 1.9 2 1 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Ald_Xan_dh_C2 PF02738.18 BAJ51567.1 - 7.6e-167 556.1 1.0 1.2e-166 555.5 1.0 1.2 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ51567.1 - 3.5e-27 94.9 0.0 8e-27 93.8 0.0 1.7 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NTP_transf_2 PF01909.23 BAJ51568.1 - 1.9e-10 40.9 0.0 2.4e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAJ51568.1 - 3.1e-05 24.0 0.0 4.2e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 BAJ51568.1 - 0.0048 17.1 0.0 0.0055 16.9 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase beta palm Pox_A51 PF04948.13 BAJ51568.1 - 0.013 14.4 0.0 0.016 14.1 0.0 1.1 1 0 0 1 1 1 0 Poxvirus A51 protein DUF3626 PF12294.8 BAJ51568.1 - 0.17 10.9 0.0 0.19 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3626) OTCace_N PF02729.21 BAJ51569.1 - 7.9e-37 126.5 0.0 1.4e-36 125.7 0.0 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 BAJ51569.1 - 2.1e-36 125.3 0.0 3e-36 124.9 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AA_kinase PF00696.28 BAJ51570.1 - 4e-33 115.0 0.1 7.2e-33 114.2 0.1 1.4 1 1 0 1 1 1 1 Amino acid kinase family GntR PF00392.21 BAJ51570.1 - 0.13 12.0 0.0 11 5.8 0.0 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family PALP PF00291.25 BAJ51571.1 - 1.3e-74 251.3 0.1 1.5e-74 251.0 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme V4R PF02830.18 BAJ51572.1 - 2.1e-12 46.9 3.2 3.2e-12 46.3 3.2 1.3 1 0 0 1 1 1 1 V4R domain PALP PF00291.25 BAJ51573.1 - 1.1e-68 231.9 0.0 1.2e-68 231.7 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme NifZ PF04319.13 BAJ51573.1 - 0.14 12.0 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 NifZ domain OTCace PF00185.24 BAJ51574.1 - 3.5e-43 147.4 0.0 5.7e-43 146.7 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 BAJ51574.1 - 7.4e-29 100.7 0.0 1.1e-28 100.1 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UbiA PF01040.18 BAJ51575.1 - 6.4e-33 114.1 18.7 6.4e-33 114.1 18.7 1.6 1 1 0 1 1 1 1 UbiA prenyltransferase family CymA PF16941.5 BAJ51575.1 - 0.23 10.6 0.0 0.33 10.1 0.0 1.1 1 0 0 1 1 1 0 Putative cyclodextrin porin Putative_PNPOx PF01243.20 BAJ51576.1 - 0.0013 18.9 0.0 0.0019 18.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 BAJ51576.1 - 0.018 14.6 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase like MFS_1 PF07690.16 BAJ51577.1 - 1.1e-33 116.6 58.3 2.6e-26 92.4 30.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 BAJ51577.1 - 0.00032 19.7 11.0 0.041 12.7 0.0 2.4 2 1 0 2 2 2 2 MFS_1 like family DUF5423 PF17461.2 BAJ51577.1 - 0.22 10.3 0.5 0.42 9.4 0.5 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5423) ATP-synt_ab PF00006.25 BAJ51578.1 - 3.4e-69 232.8 0.0 4.4e-69 232.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 BAJ51578.1 - 4.5e-11 43.1 6.2 4.5e-11 43.1 6.2 1.8 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 BAJ51578.1 - 0.0001 22.4 5.0 0.00056 20.0 2.1 2.7 3 0 0 3 3 3 1 HAS barrel domain ATP-synt_ab PF00006.25 BAJ51579.1 - 7.5e-92 306.8 0.0 9.7e-92 306.4 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 BAJ51579.1 - 1.1e-43 147.9 0.0 1.9e-43 147.2 0.0 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 BAJ51579.1 - 1.7e-12 47.7 1.3 2.5e-12 47.1 0.3 1.9 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain AAA_22 PF13401.6 BAJ51579.1 - 0.049 13.9 0.0 0.13 12.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 BAJ51580.1 - 1.8e-27 96.5 0.0 3.2e-27 95.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 BAJ51580.1 - 6.8e-09 36.0 0.1 0.004 17.0 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 BAJ51580.1 - 7.8e-05 22.3 0.2 0.00025 20.7 0.0 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain DUF4162 PF13732.6 BAJ51580.1 - 0.0003 21.5 0.0 0.001 19.8 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 BAJ51580.1 - 0.0018 18.8 0.7 0.0038 17.8 0.2 1.5 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 BAJ51580.1 - 0.0034 17.8 0.3 0.036 14.5 0.3 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 BAJ51580.1 - 0.0088 16.0 0.0 0.047 13.6 0.0 1.9 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_30 PF13604.6 BAJ51580.1 - 0.0094 15.7 0.5 0.5 10.1 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 BAJ51580.1 - 0.017 15.5 0.0 0.054 13.9 0.0 1.9 1 1 0 1 1 1 0 AAA ATPase domain ATPase_2 PF01637.18 BAJ51580.1 - 0.02 14.8 0.1 0.048 13.6 0.0 1.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 BAJ51580.1 - 0.02 14.8 0.0 0.044 13.7 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase BCA_ABC_TP_C PF12399.8 BAJ51580.1 - 0.043 13.7 0.1 0.099 12.6 0.1 1.7 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter AAA_13 PF13166.6 BAJ51580.1 - 0.045 12.4 0.0 0.076 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 BAJ51580.1 - 0.073 12.8 0.0 0.84 9.3 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain NIR_SIR PF01077.22 BAJ51580.1 - 0.077 12.5 0.1 2.4 7.7 0.0 2.2 2 0 0 2 2 2 0 Nitrite and sulphite reductase 4Fe-4S domain TsaE PF02367.17 BAJ51580.1 - 0.093 12.7 0.1 0.25 11.4 0.1 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_22 PF13401.6 BAJ51580.1 - 0.099 12.9 0.2 0.32 11.3 0.1 2.0 1 1 1 2 2 2 0 AAA domain Mg_chelatase PF01078.21 BAJ51580.1 - 0.13 11.6 0.0 0.26 10.6 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Ph1570 PF09638.10 BAJ51580.1 - 0.14 12.0 0.0 0.29 11.0 0.0 1.5 1 0 0 1 1 1 0 Ph1570 protein Zeta_toxin PF06414.12 BAJ51580.1 - 0.16 11.2 0.0 18 4.5 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin AAA_18 PF13238.6 BAJ51580.1 - 0.16 12.5 0.4 0.37 11.4 0.3 2.1 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.22 BAJ51580.1 - 0.2 11.3 0.5 1.6 8.3 0.1 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain SMC_N PF02463.19 BAJ51580.1 - 0.24 10.8 0.0 4 6.8 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain ABC2_membrane_3 PF12698.7 BAJ51581.1 - 3.1e-08 33.1 24.0 3.1e-08 33.1 24.0 1.4 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 BAJ51581.1 - 0.076 12.3 21.1 0.081 12.2 17.8 2.2 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC2_membrane PF01061.24 BAJ51582.1 - 0.00015 21.3 20.9 0.00015 21.3 20.9 1.6 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 BAJ51582.1 - 0.00034 20.0 17.5 0.00043 19.7 17.5 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ADH_zinc_N PF00107.26 BAJ51583.1 - 3.5e-21 75.5 0.0 5.7e-21 74.8 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 BAJ51583.1 - 1.2e-18 67.0 0.2 2.2e-18 66.1 0.2 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 BAJ51583.1 - 2e-06 28.9 0.0 3.4e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 BAJ51583.1 - 2.4e-06 27.2 0.1 4.5e-06 26.3 0.1 1.5 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_N_2 PF16884.5 BAJ51583.1 - 2.5e-05 24.1 0.4 9.8e-05 22.2 0.4 1.8 1 1 0 1 1 1 1 N-terminal domain of oxidoreductase NADH_4Fe-4S PF10589.9 BAJ51583.1 - 0.0025 17.9 0.7 0.0062 16.6 0.7 1.6 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 2-Hacid_dh_C PF02826.19 BAJ51583.1 - 0.036 13.4 0.0 0.065 12.6 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_N PF08240.12 BAJ51584.1 - 8.5e-28 96.4 0.6 1.7e-27 95.4 0.1 1.7 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 BAJ51584.1 - 7.7e-27 93.8 0.0 1.3e-26 93.1 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 BAJ51584.1 - 4.1e-09 37.6 0.0 7.1e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 BAJ51584.1 - 7.5e-09 35.4 0.0 1.4e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus TrkA_N PF02254.18 BAJ51584.1 - 0.077 13.3 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain AlaDh_PNT_C PF01262.21 BAJ51584.1 - 0.084 12.2 0.2 0.13 11.5 0.2 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain tRNA_edit PF04073.15 BAJ51585.1 - 1.4e-29 102.7 0.0 1.6e-29 102.5 0.0 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain Flu_NS1 PF00600.19 BAJ51585.1 - 0.02 14.4 0.0 0.029 13.9 0.0 1.2 1 0 0 1 1 1 0 Influenza non-structural protein (NS1) TauE PF01925.19 BAJ51586.1 - 2.1e-26 93.0 41.3 2.5e-26 92.8 41.3 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF3093 PF11292.8 BAJ51586.1 - 3.2 8.0 6.4 0.23 11.7 0.6 2.0 2 2 0 2 2 2 0 Protein of unknown function (DUF3093) TrbC PF04956.13 BAJ51587.1 - 0.069 13.4 3.9 5 7.4 0.0 2.7 2 1 0 2 2 2 0 TrbC/VIRB2 family DUF2116 PF09889.9 BAJ51587.1 - 0.082 12.9 0.5 0.082 12.9 0.5 2.3 3 0 0 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF3382 PF11862.8 BAJ51587.1 - 2.2 8.6 7.3 0.48 10.7 0.3 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF3382) HTH_19 PF12844.7 BAJ51588.1 - 6e-06 26.2 0.1 0.00013 21.9 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 BAJ51588.1 - 1.1e-05 25.4 0.2 4.1e-05 23.5 0.2 2.0 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 BAJ51588.1 - 0.00012 22.3 0.0 0.00049 20.4 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain DUF898 PF05987.13 BAJ51589.1 - 0.018 14.1 0.7 0.023 13.8 0.7 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF4131 PF13567.6 BAJ51589.1 - 0.093 12.4 0.9 0.12 12.1 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) UPF0182 PF03699.13 BAJ51590.1 - 3.9e-40 137.8 1.8 3.9e-40 137.8 1.8 2.5 2 1 0 2 2 2 1 Uncharacterised protein family (UPF0182) TPP_enzyme_N PF02776.18 BAJ51591.1 - 3.5e-43 147.2 0.0 2.7e-42 144.3 0.0 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 BAJ51591.1 - 5.2e-16 58.8 0.0 1.4e-15 57.4 0.0 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFP_N PF09364.10 BAJ51591.1 - 0.034 13.0 0.2 0.068 12.0 0.2 1.5 1 1 0 1 1 1 0 XFP N-terminal domain TPP_enzyme_M PF00205.22 BAJ51591.1 - 0.16 11.7 0.0 0.33 10.7 0.0 1.6 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain PMT_2 PF13231.6 BAJ51592.1 - 0.00016 21.9 20.0 0.00016 21.9 20.0 3.1 3 0 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Glyco_transf_22 PF03901.17 BAJ51592.1 - 0.0034 16.7 5.7 0.0034 16.7 5.7 2.8 3 0 0 3 3 3 1 Alg9-like mannosyltransferase family PMT PF02366.18 BAJ51592.1 - 0.0072 15.9 15.2 0.0072 15.9 15.2 3.5 2 2 1 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase ATP-synt_J PF04911.12 BAJ51592.1 - 0.3 10.7 1.4 7.3 6.2 0.3 2.9 2 0 0 2 2 2 0 ATP synthase j chain PRC PF05239.16 BAJ51595.1 - 5.1e-05 23.3 0.4 8.1e-05 22.6 0.4 1.4 1 1 0 1 1 1 1 PRC-barrel domain Lar_restr_allev PF14354.6 BAJ51595.1 - 0.0061 16.9 1.4 0.0095 16.3 1.4 1.3 1 0 0 1 1 1 1 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.7 BAJ51595.1 - 0.023 14.6 4.0 0.033 14.2 4.0 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DUF2256 PF10013.9 BAJ51595.1 - 0.35 11.0 3.4 0.25 11.5 1.5 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) Ald_Xan_dh_C2 PF02738.18 BAJ51596.1 - 4.1e-185 616.4 0.0 4.8e-185 616.2 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 BAJ51596.1 - 3e-28 98.4 0.0 5.8e-28 97.4 0.0 1.5 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MazG PF03819.17 BAJ51598.1 - 9.3e-10 38.6 0.0 1.2e-09 38.2 0.0 1.1 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain MttA_Hcf106 PF02416.16 BAJ51599.1 - 3.4e-07 29.5 4.9 1.7e-06 27.3 4.9 2.2 1 1 0 1 1 1 1 mttA/Hcf106 family DUF677 PF05055.12 BAJ51599.1 - 0.08 11.8 0.0 0.094 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF677) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Thaumarchaeota/Candidatus_Caldiarchaeum_subterraneum-ASM27032v1/GCA_000270325.1_ASM27032v1_protein.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Thaumarchaeota/Candidatus_Caldiarchaeum_subterraneum-ASM27032v1/GCA_000270325.1_ASM27032v1_protein.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Thaumarchaeota/Candidatus_Caldiarchaeum_subterraneum-ASM27032v1/GCA_000270325.1_ASM27032v1_protein.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Thaumarchaeota/Candidatus_Caldiarchaeum_subterraneum-ASM27032v1/GCA_000270325.1_ASM27032v1_protein.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 16:14:51 2019 # [ok]